1 chr2 172585268 172585268 1 + T C rs547755931 172585268 + 172585248 172585288 41 AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCC AAACAGTCAAAAGCAGTAGCCGTGACATCTATGTCCTTCCC Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172585268 chr2:172585268 synonymous SNV . 0 21 hPsi_associated_SNPs_1 0 0 0 0 2 Cytosol 1 0 1 1 hPsi_site_1 iPseU_CNN:1;iRNA_PseU:1 2 chr5 149363791 149363791 1 + T A rs182094898 149363791 + 149363771 149363811 41 GGTAGCCATCTGTAGAAACATTTAAGATGTCACTAGAATTT GGTAGCCATCTGTAGAAACAATTAAGATGTCACTAGAATTT Direct Loss 1 0 1 0 experiment 1 Functional Loss NA| SLC26A2 ENSG00000155850 UTR3 Human protein_coding chr5:149363791 chr5:149363791 . . 0 21 hPsi_associated_SNPs_2 0 0 1 0 0 Endoplasmic reticulum 1 0 1 1 hPsi_site_2 iPseU_CNN:1;iRNA_PseU:1 3 chr5 180591180 180591180 1 + T C rs138735710 180591180 + 180591160 180591200 41 GTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGT GTAGTGTAGTGGTTATCACGCTCGCCTAACACGCGAAAGGT Direct Loss 1 0 1 0 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591180 chr5:180591180 . . 0 21 hPsi_associated_SNPs_3 0 0 0 0 0 unknown 1 0 1 1 hPsi_site_3 iPseU_CNN:1;iRNA_PseU:1 4 chr11 47074021 47074021 1 + T C BLCA 47074021 + 47074001 47074041 41 CCCCCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGA CCCCCCACAATAGGGTATCACTTTTACGGGCCTTCTGGAGA Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47074021 chr11:47074021 nonsynonymous SNV 0.977 4 21 hPsi_associated_SNPs_4 0 0 1 0 2 chromatin 1 0 1 1 hPsi_site_4 iPseU_CNN:1;iRNA_PseU:1 5 chr22 38273846 38273846 1 + T C COAD 38273846 + 38273826 38273866 41 TCTATGAAGAACTTTTCAGTTACTCCTGCCCCAAGTTCCTG TCTATGAAGAACTTTTCAGTCACTCCTGCCCCAAGTTCCTG Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38273846 chr22:38273846 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_5 0 0 1 0 0 Cytosol 1 0 1 1 hPsi_site_5 iPseU_CNN:1;iRNA_PseU:1 6 chr3 9803177 9803177 1 + A C COAD 9803177 - 9803157 9803197 41 CCCTACAGCAAGGCTGTGGATTGCTGGTCCATAGGTGTCAT CCCTACAGCAAGGCTGTGGAGTGCTGGTCCATAGGTGTCAT Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803177 chr3:9803177 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_6 0 0 1 0 2 Ribosome 1 0 1 1 hPsi_site_6 iPseU_CNN:1;iRNA_PseU:1 7 chr1 29064803 29064803 1 + T C COAD 29064803 + 29064783 29064823 41 CTGTACATCAAAAGGATGGATTAAACGATGATGATTTTGAA CTGTACATCAAAAGGATGGACTAAACGATGATGATTTTGAA Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29064803 chr1:29064803 synonymous SNV . 0 21 hPsi_associated_SNPs_7 0 0 1 0 2 Cytosol 1 0 1 1 hPsi_site_7 iPseU_CNN:1;iRNA_PseU:1 8 chr9 80851399 80851399 1 + T C COAD 80851399 + 80851379 80851419 41 TCCGGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCCGC TCCGGGAGGGCGTGCTGGATCTCAACGCCGACCGCCTCCGC Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CEP78 ENSG00000148019 CDS Human protein_coding chr9:80851399 chr9:80851399 nonsynonymous SNV 0.970 0 21 hPsi_associated_SNPs_8 0 0 1 0 0 Nucleus 1 0 1 1 hPsi_site_8 iPseU_CNN:1;iRNA_PseU:1 9 chr1 156314408 156314408 1 + T C GBM 156314408 + 156314388 156314428 41 GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCTCCCCCAG GCTAATGCTGTGCCTCTCTGCAGAGCAAAACCCTCCCCCAG Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSACC ENSG00000163467 CDS Human protein_coding chr1:156314408 chr1:156314408 synonymous SNV . 0 21 hPsi_associated_SNPs_9 0 0 0 0 2 chromatin 1 0 1 1 hPsi_site_9 iPseU_CNN:1;iRNA_PseU:1 10 chr1 226027678 226027678 1 + T C KICH 226027678 + 226027658 226027698 41 CCGTCAAGGAGAAGGTATTCTACAGCCTGATGAGGGAGAGC CCGTCAAGGAGAAGGTATTCCACAGCCTGATGAGGGAGAGC Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027678 chr1:226027678 nonsynonymous SNV 0.991 0 21 hPsi_associated_SNPs_10 0 0 1 0 1 Endoplasmic reticulum 1 0 1 1 hPsi_site_10 iPseU_CNN:1;iRNA_PseU:1 11 chr11 68369352 68369352 1 + T A LIHC 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACAAAAGATTCTTTAAGGAGAAATTCTCCAGTGGAAATGGA Direct Loss 1 0 1 0 experiment 1 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369352 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_11 0 0 1 0 2 Nucleus 1 0 1 1 hPsi_site_11 iPseU_CNN:1;iRNA_PseU:1 12 chr4 54257193 54257193 1 + T A LUAD 54257193 + 54257173 54257213 41 TAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAAT TAGGTGCTGATCTTTCTGATAATTTTAATTATGGGTTTAAT Direct Loss 1 0 1 0 experiment 1 Functional Loss NA| FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257193 chr4:54257193 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_12 0 0 1 0 1 Nucleus 1 0 1 1 hPsi_site_12 iPseU_CNN:1;iRNA_PseU:1 13 chr11 122669678 122669678 1 + T A LUAD 122669678 + 122669658 122669698 41 TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTC TTATTAGAGAGCAATACCATAATCGATCATGTCTATTGCTC Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122669678 chr11:122669678 synonymous SNV . 0 21 hPsi_associated_SNPs_13 0 0 0 0 2 Ribosome 1 0 1 1 hPsi_site_13 iPseU_CNN:1;iRNA_PseU:1 14 chr12 124497241 124497241 1 + T A OV 124497241 + 124497221 124497261 41 GGAAGGCGTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG GGAAGGCGTTCAGTCAGAGTACGAGCCTCTGCATCCACCAG Direct Loss 1 0 1 0 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497241 chr12:124497241 nonsynonymous SNV 0.989 1 21 hPsi_associated_SNPs_14 0 0 1 0 0 Nucleus 1 0 1 1 hPsi_site_14 iPseU_CNN:1;iRNA_PseU:1 15 chr14 105995409 105995409 1 + T C SKCM 105995409 + 105995389 105995429 41 GCTACGCCATGATCCTGTGGTTCCTTTACATCTTCGTGCTG GCTACGCCATGATCCTGTGGCTCCTTTACATCTTCGTGCTG Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM121 ENSG00000184986 CDS Human protein_coding chr14:105995409 chr14:105995409 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_15 0 0 0 0 0 exosome 1 0 1 1 hPsi_site_15 iPseU_CNN:1;iRNA_PseU:1 16 chr17 74740462 74740462 1 + T A STAD 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGGGGACAGTACTATTCTTTCTCATTCGGAA Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740462 synonymous SNV . 0 21 hPsi_associated_SNPs_16 0 0 1 0 2 Endoplasmic reticulum 1 0 1 1 hPsi_site_16 iPseU_CNN:1;iRNA_PseU:1 17 chr2 201440164 201440164 1 + T C STAD 201440164 + 201440144 201440184 41 AGGTGTACTCCTTTCTATTTTAAAGAGCCAAGCCTCAGAGA AGGTGTACTCCTTTCTATTTCAAAGAGCCAAGCCTCAGAGA Direct Loss 1 0 1 0 experiment 1 Functional Loss NA| SGO2 ENSG00000163535 CDS Human protein_coding chr2:201440164 chr2:201440164 synonymous SNV . 0 21 hPsi_associated_SNPs_17 0 0 1 0 0 cytosol 1 0 1 1 hPsi_site_17 iPseU_CNN:1;iRNA_PseU:1 18 chr1 109440642 109440642 1 + T G UCEC 109440642 + 109440622 109440662 41 TCATGCCAAAGGGAAAAGTTTTGGTTGCCCTGGTCCCCAGG TCATGCCAAAGGGAAAAGTTGTGGTTGCCCTGGTCCCCAGG Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109440642 chr1:109440642 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_18 0 0 0 0 2 Endoplasmic reticulum 1 0 1 1 hPsi_site_18 iPseU_CNN:1;iRNA_PseU:1 19 chrX 23697344 23697344 1 + T C UCEC 23697344 + 23697324 23697364 41 GATTCCACTTCTTTCAGATTTGACCCATCAGATCTCAAAGG GATTCCACTTCTTTCAGATTCGACCCATCAGATCTCAAAGG Direct Loss 1 0 1 0 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23697344 chrX:23697344 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_19 0 0 1 0 2 Endoplasmic reticulum 1 0 1 1 hPsi_site_19 iPseU_CNN:1;iRNA_PseU:1 20 chr19 33696967 33696967 1 + T C UCEC 33696967 + 33696947 33696987 41 AGGGTGGCAGTGGTCTGTGCTACACGCCTGCCGACCGCTGC AGGGTGGCAGTGGTCTGTGCCACACGCCTGCCGACCGCTGC Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696967 chr19:33696967 nonsynonymous SNV 0.810 5 21 hPsi_associated_SNPs_20 0 0 0 0 0 Ribosome 1 0 1 1 hPsi_site_20 iPseU_CNN:1;iRNA_PseU:1 21 chr1 215781433 215781433 1 + T C UCEC 215781433 + 215781413 215781453 41 TGATCTCTACTCAGCCAGGTTCTACTCCTTTAGCGTCATTC TGATCTCTACTCAGCCAGGTCCTACTCCTTTAGCGTCATTC Direct Loss 1 0 1 0 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215781433 chr1:215781433 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_21 0 0 1 0 2 Ribosome 1 0 1 1 hPsi_site_21 iPseU_CNN:1;iRNA_PseU:1 22 chrX 117875003 117875003 1 + T G UCS 117875003 + 117874983 117875023 41 CTCAGCCACCTGTGACAAATTTGAGTGTCTCTGTTGAAAAC CTCAGCCACCTGTGACAAATGTGAGTGTCTCTGTTGAAAAC Direct Loss 1 0 1 0 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117875003 chrX:117875003 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_22 0 0 1 0 1 Endoplasmic reticulum 1 0 1 1 hPsi_site_22 iPseU_CNN:1;iRNA_PseU:1 23 chr1 28975208 28975208 1 + T C BRCA 28975208 + 28975188 28975228 41 TCGGAAGCATAATTTTTTGGTATTTGGGCAGCTGGTGATCG TCGGAAGCATAATTTTTTGGCATTTGGGCAGCTGGTGATCG Direct Loss 0.990776655716724 0 0.38575378 0 prediction 0.981553311433448 Functional Loss - LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975208 chr1:28975208 . . 0 21 hPsi_associated_SNPs_1982 0 0 1 2 0 unknown 0.43871859296216 0 0 0 hPsi_site_23 iPseU_CNN:0;iRNA_PseU:0 24 chr7 150935570 150935570 1 + T C UCEC 150935570 + 150935550 150935590 41 GGCTGGAGGTGATGGATGTTTTCCTCCGGTTCTCAGGGCTC GGCTGGAGGTGATGGATGTTCTCCTCCGGTTCTCAGGGCTC Direct Loss 0.988820633595277 0 0.8050045 0 prediction 0.977641267190555 Functional Loss - CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150935570 chr7:150935570 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_1983 0 0 1 0 0 Nucleus 0.43871859329612 0 0.610009 0 hPsi_site_24 iPseU_CNN:0.610009;iRNA_PseU:0 25 chr6 110301249 110301249 1 + T A UCEC 110301249 + 110301229 110301269 41 AGGACCCGGCGGTCTACACTTACGCCACCCTGCTGCCCGCC AGGACCCGGCGGTCTACACTAACGCCACCCTGCTGCCCGCC Direct Loss 0.984595596028677 0 0.79165435 0 prediction 0.969191192057353 Functional Loss - GPR6 ENSG00000146360 CDS Human protein_coding chr6:110301249 chr6:110301249 nonsynonymous SNV 0.978 4 21 hPsi_associated_SNPs_1984 0 0 0 0 0 unknown 0.438723108149826 0 0.5833087 0 hPsi_site_25 iPseU_CNN:0.5833087;iRNA_PseU:0 26 chr12 132322761 132322761 1 + T C UCEC 132322761 + 132322741 132322781 41 AGTGGCTAAGCAGGTTCGGTTACCTGCCCCCGGCTGACCCC AGTGGCTAAGCAGGTTCGGTCACCTGCCCCCGGCTGACCCC Direct Loss 0.984529874488194 0 0.9073913 0 prediction 0.969059748976388 Functional Loss - MMP17 ENSG00000198598 CDS Human protein_coding chr12:132322761 chr12:132322761 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_1985 0 0 0 0 1 Cytosol 0.438718592995722 0 0.8147826 0 hPsi_site_26 iPseU_CNN:0.8147826;iRNA_PseU:0 27 chr17 7577566 7577566 1 + T C COAD 7577566 + 7577546 7577586 41 GCCGCCCATGCAGGAACTGTTACACATGTAGTTGTAGTGGA GCCGCCCATGCAGGAACTGTCACACATGTAGTTGTAGTGGA Direct Loss 0.984471284723806 0 0.6907218 0 prediction 0.968942569447612 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577566 chr17:7577566 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_1986 12 0 0 0 0 Ribosome 0.438760939441954 0 0.3814436 0 hPsi_site_27 iPseU_CNN:0.3814436;iRNA_PseU:0 28 chr6 52013787 52013787 1 + T C COAD 52013787 + 52013767 52013807 41 AGTCCGTCTTCCTGAGAGGTTTGGTCCCCTTCAACCAGCTA AGTCCGTCTTCCTGAGAGGTCTGGTCCCCTTCAACCAGCTA Direct Loss 0.984410895794863 0 0.3588382 0 prediction 0.968821791589726 Functional Loss - MIR133B ENSG00000199080 ncRNA_exonic Human miRNA chr6:52013787 chr6:52013787 . . 0 21 hPsi_associated_SNPs_1987 0 0 1 0 0 unknown 0.438718203684282 0 0 0 hPsi_site_28 iPseU_CNN:0;iRNA_PseU:0 29 chr6 31785343 31785343 1 + A G OV 31785343 - 31785323 31785363 41 CAGTCCGCTGATGATGGGGTTACACACCTGCTCCAGCTCCT CAGTCCGCTGATGATGGGGTCACACACCTGCTCCAGCTCCT Direct Loss 0.983432264308228 0 0.95047426 0 prediction 0.966864528616457 Functional Loss - HSPA1A ENSG00000204389 CDS Human protein_coding chr6:31785343 chr6:31785343 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_1988 0 0 0 0 0 Ribosome 0.438979333185479 0 0.90094852 0 hPsi_site_29 iPseU_CNN:0.90094852;iRNA_PseU:0 30 chr14 101500119 101500119 1 + T C UCEC 101500119 + 101500099 101500139 41 TGAAAAGAAGTTGCCCATGTTATTTTCGCTTTATATGTGAC TGAAAAGAAGTTGCCCATGTCATTTTCGCTTTATATGTGAC Direct Loss 0.98286791518526 0 0.7024628 0 prediction 0.96573583037052 Functional Loss - MIR495 ENSG00000207743 ncRNA_exonic Human miRNA chr14:101500119 chr14:101500119 . . 0 21 hPsi_associated_SNPs_1989 0 0 0 0 0 unknown 0.438721637142518 0 0.4049256 0 hPsi_site_30 iPseU_CNN:0.4049256;iRNA_PseU:0 31 chr22 50962385 50962385 1 + T A rs536037216 50962385 + 50962365 50962405 41 GGAGGCAAACCAGGCTCTGCTTCCAGCTGCCGCACCACCTG GGAGGCAAACCAGGCTCTGCATCCAGCTGCCGCACCACCTG Direct Loss 0.982469551153509 0 0.24897888 0 prediction 0.964939102307017 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962385 chr22:50962385 nonsynonymous SNV 0.005 2 21 hPsi_associated_SNPs_1990 0 0 1 0 0 Ribosome 0.438723062724338 0 0 0 hPsi_site_31 iPseU_CNN:0;iRNA_PseU:0 32 chr11 5602431 5602431 1 + T A STAD 5602431 + 5602411 5602451 41 TGGCCAATTTGTGGCTAGGTTATAGCCTCATTTCCTTTGAT TGGCCAATTTGTGGCTAGGTAATAGCCTCATTTCCTTTGAT Direct Loss 0.981933447809574 0 0.8491869 0 prediction 0.963866895619147 Functional Loss - OR52B6 ENSG00000187747 CDS Human protein_coding chr11:5602431 chr11:5602431 nonsynonymous SNV 0.805 0 21 hPsi_associated_SNPs_1991 0 0 0 0 0 unknown 0.438718593144463 0 0.6983738 0 hPsi_site_32 iPseU_CNN:0.6983738;iRNA_PseU:0 33 chr2 133402744 133402744 1 + A G SKCM 133402744 - 133402724 133402764 41 CTCGTCCAGTCGTGCTTGGGTTTGGCCGCAGCCATGATCCT CTCGTCCAGTCGTGCTTGGGCTTGGCCGCAGCCATGATCCT Direct Loss 0.981862731773957 0 0.8541758 0 prediction 0.963725463547913 Functional Loss - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402744 chr2:133402744 synonymous SNV . 0 21 hPsi_associated_SNPs_1992 0 0 0 0 0 nucleus 0.438816851974484 0 0.7083516 0 hPsi_site_33 iPseU_CNN:0.7083516;iRNA_PseU:0 34 chr11 6412046 6412046 1 + T C COAD 6412046 + 6412026 6412066 41 CCAAGGCCATCCTGCCAGGTTACATCGCATAGTGCCCCGGC CCAAGGCCATCCTGCCAGGTCACATCGCATAGTGCCCCGGC Direct Loss 0.980308972783033 0 0.80111915 0 prediction 0.960617945566066 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6412046 chr11:6412046 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_1993 0 0 0 1 0 Endoplasmic reticulum 0.438925908569899 0 0.6022383 0 hPsi_site_34 iPseU_CNN:0.6022383;iRNA_PseU:0 35 chr19 11660497 11660497 1 + T C COAD 11660497 + 11660477 11660517 41 CGCAGCGGGGCATGACGGTGTATGGGCTGCCACGCCAGGTC CGCAGCGGGGCATGACGGTGCATGGGCTGCCACGCCAGGTC Direct Loss 0.980308460303309 0 0.504128 0 prediction 0.960616920606618 Functional Loss - CNN1 ENSG00000130176 CDS Human protein_coding chr19:11660497 chr19:11660497 nonsynonymous SNV 0.983 2 21 hPsi_associated_SNPs_1994 0 0 0 0 0 Cytosol 0.438716671152529 0 0.00825600000000004 0 hPsi_site_35 iPseU_CNN:0.00825600000000004;iRNA_PseU:0 36 chr14 74428218 74428218 1 + T A HNSC 74428218 + 74428198 74428238 41 GTCAACATGGGCTTTGGGGATATCTCCAGCTTGGCCCATCA GTCAACATGGGCTTTGGGGAAATCTCCAGCTTGGCCCATCA Direct Loss 0.979530866050307 0 0.6624186 0 prediction 0.959061732100615 Functional Loss - COQ6 ENSG00000119723 CDS Human protein_coding chr14:74428218 chr14:74428218 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_1995 0 0 0 0 2 Ribosome 0.438718569692149 0 0.3248372 0 hPsi_site_36 iPseU_CNN:0.3248372;iRNA_PseU:0 37 chr3 43389121 43389121 1 + A C UCEC 43389121 - 43389101 43389141 41 GTGTTGAGAGGGACATGGGTTTCTTGTCCTCCTCATCTTCC GTGTTGAGAGGGACATGGGTGTCTTGTCCTCCTCATCTTCC Direct Loss 0.978549679006043 0 0.5320685 0 prediction 0.957099358012085 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389121 chr3:43389121 nonsynonymous SNV 0.805 1 21 hPsi_associated_SNPs_1996 0 0 0 0 0 Cytosol 0.438313757942108 0 0.0641370000000001 0 hPsi_site_37 iPseU_CNN:0.0641370000000001;iRNA_PseU:0 38 chr15 63597857 63597857 1 + T G rs1047552 63597857 + 63597837 63597877 41 ATAAACCTGGCGTCAGCATTTATAATCCTGGTGCTCATGGG ATAAACCTGGCGTCAGCATTGATAATCCTGGTGCTCATGGG Direct Loss 0.977992964533408 0 0.67246574 0 prediction 0.955985929066817 Functional Loss - APH1B ENSG00000138613 CDS Human protein_coding chr15:63597857 chr15:63597857 nonsynonymous SNV 0.273 2 21 hPsi_associated_SNPs_1997 0 0 1 0 1 Endoplasmic reticulum 0.438718593100029 0 0.34493148 0 hPsi_site_38 iPseU_CNN:0.34493148;iRNA_PseU:0 39 chr6 26022125 26022125 1 + T C CESC 26022125 + 26022105 26022145 41 ATCCGTGACGCTGTCACCTATACGGAGCACGCCAAGCGCAA ATCCGTGACGCTGTCACCTACACGGAGCACGCCAAGCGCAA Direct Loss 0.977695385884986 0 0.664233 0 prediction 0.955390771769971 Functional Loss - HIST1H4A ENSG00000196176 CDS Human other chr6:26022125 chr6:26022125 synonymous SNV . 0 21 hPsi_associated_SNPs_1998 0 0 1 0 0 exosome 0.438718472058594 0 0.328466 0 hPsi_site_39 iPseU_CNN:0.328466;iRNA_PseU:0 40 chr8 42262421 42262421 1 + T C STAD 42262421 + 42262401 42262441 41 CCAGCCTGATTGGACTGGGTTATACTCAGACCCTTCGACCA CCAGCCTGATTGGACTGGGTCATACTCAGACCCTTCGACCA Direct Loss 0.977377493712472 0 0.8355263 0 prediction 0.954754987424944 Functional Loss - VDAC3 ENSG00000078668 CDS Human protein_coding chr8:42262421 chr8:42262421 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_1999 0 0 1 0 2 Ribosome 0.438718584798863 0 0.6710526 0 hPsi_site_40 iPseU_CNN:0.6710526;iRNA_PseU:0 41 chrX 57162487 57162487 1 + T C UCEC 57162487 + 57162467 57162507 41 GATGCGGAGGTCACCTTCCTTATAATCATCTAGAAGCTGGT GATGCGGAGGTCACCTTCCTCATAATCATCTAGAAGCTGGT Direct Loss 0.977190304479869 0 0.3876831 0 prediction 0.954380608959739 Functional Loss - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162487 chrX:57162487 nonsynonymous SNV 0.902 2 21 hPsi_associated_SNPs_2000 0 0 0 0 0 exosome 0.438597899251527 0 0 0 hPsi_site_41 iPseU_CNN:0;iRNA_PseU:0 Hip circumference adjusted for BMI 42 chr17 34174007 34174007 1 + T C UCEC 34174007 + 34173987 34174027 41 CATAGTGAAATTGCCAGAGTTTTGCCTGCTGCTTTCCTCGT CATAGTGAAATTGCCAGAGTCTTGCCTGCTGCTTTCCTCGT Direct Loss 0.977169168451556 0 0.56272995 0 prediction 0.954338336903113 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34174007 chr17:34174007 synonymous SNV . 0 21 hPsi_associated_SNPs_2001 0 0 1 7 1 Cytosol 0.438728414260339 0 0.1254599 0 hPsi_site_42 iPseU_CNN:0.1254599;iRNA_PseU:0 43 chr16 3243942 3243942 1 + T A rs402936 3243942 + 3243922 3243962 41 CAGTGGCCTGATGGATAAGGTACTGGCCTCCTAAGCCAGGG CAGTGGCCTGATGGATAAGGAACTGGCCTCCTAAGCCAGGG Direct Loss 0.977086607029972 0 0.80403197 0 prediction 0.954173214059945 Functional Loss - CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3243942 chr16:3243942 . . 0 21 hPsi_associated_SNPs_2002 0 0 1 0 0 unknown 0.43871859295082 0 0.60806394 0 hPsi_site_43 iPseU_CNN:0.60806394;iRNA_PseU:0 44 chr21 38593865 38593865 1 + T A LUAD 38593865 + 38593845 38593885 41 GGTAGAAATGGACTGGAAGGTTCGTTCCCCTTGCCCACCAA GGTAGAAATGGACTGGAAGGATCGTTCCCCTTGCCCACCAA Direct Loss 0.977069808193542 0 0.715699 0 prediction 0.954139616387085 Functional Loss - DSCR9 ENSG00000230366;ENSG00000242553 ncRNA_exonic Human other chr21:38593865 chr21:38593865 . . 0 21 hPsi_associated_SNPs_2003 0 0 1 0 0 unknown 0.438718592785841 0 0.431398 0 hPsi_site_44 iPseU_CNN:0.431398;iRNA_PseU:0 45 chr19 58928399 58928399 1 + T G KIRC 58928399 + 58928379 58928419 41 GGAAGGTGTTCTTAAAGGCCTTTGCCCTCCTTGACCATCTG GGAAGGTGTTCTTAAAGGCCGTTGCCCTCCTTGACCATCTG Direct Loss 0.97638608942507 0 0.6227551 0 prediction 0.95277217885014 Functional Loss - ZNF584 ENSG00000171574 CDS Human protein_coding chr19:58928399 chr19:58928399 nonsynonymous SNV 0.874 2 21 hPsi_associated_SNPs_2004 0 0 1 0 0 membrane 0.438718594020963 0 0.2455102 0 hPsi_site_45 iPseU_CNN:0.2455102;iRNA_PseU:0 46 chr2 27293051 27293051 1 + T C OV 27293051 + 27293031 27293071 41 ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGC ACTCCCCATCCTGGAATTGTCACAGCAGGGGTCCCTTGGGC Direct Loss 0.976162040240978 0 0.6293808 0 prediction 0.952324080481956 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27293051 chr2:27293051 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2005 0 0 0 0 1 Cytosol 0.438718563106606 0 0.2587616 0 hPsi_site_46 iPseU_CNN:0.2587616;iRNA_PseU:0 47 chr15 32935872 32935872 1 + T C SKCM 32935872 + 32935852 32935892 41 GATGGACTCCAGCATTTGCTTACAGCCCCCGGACCCCTGAC GATGGACTCCAGCATTTGCTCACAGCCCCCGGACCCCTGAC Direct Loss 0.976053551200697 0 0.80699116 0 prediction 0.952107102401393 Functional Loss - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32935872 chr15:32935872 nonsynonymous SNV 0.881 1 21 hPsi_associated_SNPs_2006 0 0 0 0 1 cytosol 0.438718699220968 0 0.61398232 0 hPsi_site_47 iPseU_CNN:0.61398232;iRNA_PseU:0 48 chr19 49447728 49447728 1 + T A KIRP 49447728 + 49447708 49447748 41 ACAACGGGGCAGGCATGAGTTATGAGGCCAAGCACGTCTGG ACAACGGGGCAGGCATGAGTAATGAGGCCAAGCACGTCTGG Direct Loss 0.975978397235685 0 0.6035435 0 prediction 0.95195679447137 Functional Loss - DHDH ENSG00000104808 CDS Human protein_coding chr19:49447728 chr19:49447728 nonsynonymous SNV 0.810 4 21 hPsi_associated_SNPs_2007 0 0 0 0 0 cytosol 0.439288988630985 0 0.207087 0 hPsi_site_48 iPseU_CNN:0.207087;iRNA_PseU:0 49 chr14 24600881 24600881 1 + T C UCEC 24600881 + 24600861 24600901 41 GGGTGGCCTCTGCCTTGCTGTACTTTGGAAGCGAACAGGCC GGGTGGCCTCTGCCTTGCTGCACTTTGGAAGCGAACAGGCC Direct Loss 0.975797704590186 0 0.7215494 0 prediction 0.951595409180372 Functional Loss - FITM1 ENSG00000139914;ENSG00000259371 CDS Human other chr14:24600881 chr14:24600881 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_2008 0 0 1 0 0 insoluble cytoplasm 0.438722902628316 0 0.4430988 0 hPsi_site_49 iPseU_CNN:0.4430988;iRNA_PseU:0 50 chr16 31141422 31141422 1 + T C LUAD 31141422 + 31141402 31141442 41 ACGTGGAGCCGTTCGTCTTTTACATCCTGACTGAGGTGGAC ACGTGGAGCCGTTCGTCTTTCACATCCTGACTGAGGTGGAC Direct Loss 0.975681568423439 0 0.5766936 0 prediction 0.951363136846877 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141422 chr16:31141422 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2009 0 0 1 0 2 Ribosome 0.438713612585085 0 0.1533872 0 hPsi_site_50 iPseU_CNN:0.1533872;iRNA_PseU:0 51 chr22 50962320 50962320 1 + A G rs370229835 50962320 - 50962300 50962340 41 GGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTACG GGACCCCGAGCGGGACGACGCTGAAGCCATGGCCCGCTACG Direct Loss 0.975629320723226 0 0.7701651 0 prediction 0.951258641446451 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962320 chr22:50962320 nonsynonymous SNV 0.008 1 21 hPsi_associated_SNPs_2010 0 0 1 0 0 Ribosome 0.438718963111501 0 0.5403302 0 hPsi_site_51 iPseU_CNN:0.5403302;iRNA_PseU:0 52 chr12 53865535 53865535 1 + T C UCEC 53865535 + 53865515 53865555 41 GGATCTACTGATAGGCAGGTTACCATCACTGGATCTGCTGC GGATCTACTGATAGGCAGGTCACCATCACTGGATCTGCTGC Direct Loss 0.974933028621869 0 0.56990105 0 prediction 0.949866057243739 Functional Loss - PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53865535 chr12:53865535 synonymous SNV . 0 21 hPsi_associated_SNPs_2011 0 0 1 0 1 Cytosol 0.582939836188832 0 0.1398021 0.165879672377664 hPsi_site_52 iPseU_CNN:0.1398021;iRNA_PseU:0.165879672377664 Breast cancer 53 chr7 143807039 143807039 1 + T C HNSC 143807039 + 143807019 143807059 41 TGGTGATGTCCTATGATAGGTATGTGGCCATCTGCCACCCT TGGTGATGTCCTATGATAGGCATGTGGCCATCTGCCACCCT Direct Loss 0.97482785260235 0 0.73834974 0 prediction 0.9496557052047 Functional Loss - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807039 chr7:143807039 nonsynonymous SNV 0.149 1 21 hPsi_associated_SNPs_2012 0 0 0 0 0 unknown 0.438944746556435 0 0.47669948 0 hPsi_site_53 iPseU_CNN:0.47669948;iRNA_PseU:0 54 chr1 201970562 201970562 1 + T C rs4332408 201970562 + 201970542 201970582 41 GAGAAAGGTTTCTGCTTTGTTTCATACCTGGCCCACTTGGT GAGAAAGGTTTCTGCTTTGTCTCATACCTGGCCCACTTGGT Direct Loss 0.974790196374868 0 0.6145817 0 prediction 0.949580392749737 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201970562 chr1:201970562 synonymous SNV . 0 21 hPsi_associated_SNPs_2013 0 0 1 0 2 Ribosome 0.438720567177291 0 0.2291634 0 hPsi_site_54 iPseU_CNN:0.2291634;iRNA_PseU:0 55 chr6 26022123 26022123 1 + T C BLCA 26022123 + 26022103 26022143 41 TGATCCGTGACGCTGTCACCTATACGGAGCACGCCAAGCGC TGATCCGTGACGCTGTCACCCATACGGAGCACGCCAAGCGC Direct Loss 0.974627483847814 0 0.52671194 0 prediction 0.949254967695628 Functional Loss - HIST1H4A ENSG00000196176 CDS Human other chr6:26022123 chr6:26022123 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2014 0 0 1 0 0 exosome 0.43394496034373 0 0.05342388 0 hPsi_site_55 iPseU_CNN:0.05342388;iRNA_PseU:0 56 chr12 54936413 54936413 1 + T C STAD 54936413 + 54936393 54936433 41 TGCTGGAGTCCTGTTTCCCTTATGTCCTGCTTCGAAATGCC TGCTGGAGTCCTGTTTCCCTCATGTCCTGCTTCGAAATGCC Direct Loss 0.974612597458737 0 0.29539567 0 prediction 0.949225194917475 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54936413 chr12:54936413 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2015 0 0 1 0 1 Cytosol 0.438718446962711 0 0 0 hPsi_site_56 iPseU_CNN:0;iRNA_PseU:0 57 chr19 1105716 1105716 1 + T C STAD 1105716 + 1105696 1105736 41 GGCTACAACGTCAAATTCGATATGTTCAGCAAGATCTGCGT GGCTACAACGTCAAATTCGACATGTTCAGCAAGATCTGCGT Direct Loss 0.97454923668193 0 0.68602645 0 prediction 0.949098473363859 Functional Loss - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1105716 chr19:1105716 synonymous SNV . 0 21 hPsi_associated_SNPs_2016 0 0 1 0 2 Cytosol 0.438721074458272 0 0.3720529 0 hPsi_site_57 iPseU_CNN:0.3720529;iRNA_PseU:0 58 chr19 56114158 56114158 1 + T C SKCM 56114158 + 56114138 56114178 41 GCACCCGGAGGCCATGGGGGTACCCCTGTGTGCACCAGATC GCACCCGGAGGCCATGGGGGCACCCCTGTGTGCACCAGATC Direct Loss 0.974453545834002 0 0.69274867 0 prediction 0.948907091668005 Functional Loss - ZNF524 ENSG00000171443 CDS Human protein_coding chr19:56114158 chr19:56114158 nonsynonymous SNV 0.082 0 21 hPsi_associated_SNPs_2017 0 0 0 0 0 chromatin 0.438804630336546 0 0.38549734 0 hPsi_site_58 iPseU_CNN:0.38549734;iRNA_PseU:0 59 chr19 42776580 42776580 1 + T C rs10426310 42776580 + 42776560 42776600 41 GCTCGGCGTGGTGATGGCCTTTTCCTGCCGGCTGTGGTGCG GCTCGGCGTGGTGATGGCCTCTTCCTGCCGGCTGTGGTGCG Direct Loss 0.974273808641327 0 0.6419411 0 prediction 0.948547617282654 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42776580 chr19:42776580 synonymous SNV . 0 21 hPsi_associated_SNPs_2018 0 0 1 0 0 Cytosol 0.438714094999731 0 0.2838822 0 hPsi_site_59 iPseU_CNN:0.2838822;iRNA_PseU:0 60 chr14 101493500 101493500 1 + T C LUAD 101493500 + 101493480 101493520 41 GAGGACGAAACACACCTGGTTAACCTCTTTTCCAGTATCAA GAGGACGAAACACACCTGGTCAACCTCTTTTCCAGTATCAA Direct Loss 0.974259007372729 0 0.5207074 0 prediction 0.948518014745458 Functional Loss - MIR329-2 ENSG00000207762 ncRNA_exonic Human miRNA chr14:101493500 chr14:101493500 . . 0 21 hPsi_associated_SNPs_2019 0 0 1 0 0 unknown 0.438705167173587 0 0.0414148000000001 0 hPsi_site_60 iPseU_CNN:0.0414148000000001;iRNA_PseU:0 61 chr11 5841670 5841670 1 + T C rs576946662 5841670 + 5841650 5841690 41 ATCTCCCTGCCATTCTGCTTTATGTACATCATTGCTGTCGT ATCTCCCTGCCATTCTGCTTCATGTACATCATTGCTGTCGT Direct Loss 0.974179400779065 0 0.33046055 0 prediction 0.94835880155813 Functional Loss - OR52N2 ENSG00000180988 CDS Human protein_coding chr11:5841670 chr11:5841670 synonymous SNV . 0 21 hPsi_associated_SNPs_2020 0 0 0 0 0 unknown 0.438647427295099 0 0 0 hPsi_site_61 iPseU_CNN:0;iRNA_PseU:0 62 chr1 32740379 32740379 1 + T C LIHC 32740379 + 32740359 32740399 41 GAGGTGCGGGACCCACTGGTTACCTACGAAGGCTCCAATCC GAGGTGCGGGACCCACTGGTCACCTACGAAGGCTCCAATCC Direct Loss 0.973775907373015 0 0.7710884 0 prediction 0.947551814746031 Functional Loss - LCK ENSG00000182866 CDS Human protein_coding chr1:32740379 chr1:32740379 synonymous SNV . 0 21 hPsi_associated_SNPs_2021 0 0 0 0 2 Cytosol 0.438691954107004 0 0.5421768 0 hPsi_site_62 iPseU_CNN:0.5421768;iRNA_PseU:0 63 chr6 27792232 27792232 1 + T A rs2277104 27792232 + 27792212 27792252 41 TGAGCGTCCCTTTCTATCAATAAAAGGCCCTTTTCAGGGCC TGAGCGTCCCTTTCTATCAAAAAAAGGCCCTTTTCAGGGCC Direct Loss 0.973536173779093 0 0.62811893 0 prediction 0.947072347558187 Functional Loss - HIST1H4J ENSG00000197238 UTR3 Human protein_coding chr6:27792232 chr6:27792232 . . 0 21 hPsi_associated_SNPs_2022 0 0 1 0 0 Ribosome 0.438718569293181 0 0.25623786 0 hPsi_site_63 iPseU_CNN:0.25623786;iRNA_PseU:0 64 chr17 43246518 43246518 1 + A G rs73319050 43246518 - 43246498 43246538 41 GGGTCCGGGGACTCCTACTGTTCCAGCCCAGGCCACCGACA GGGTCCGGGGACTCCTACTGCTCCAGCCCAGGCCACCGACA Direct Loss 0.972904596157893 0 0.37491202 0 prediction 0.945809192315785 Functional Loss - HEXIM2 ENSG00000168517 CDS Human protein_coding chr17:43246518 chr17:43246518 nonsynonymous SNV 0.257 0 21 hPsi_associated_SNPs_2023 0 0 0 0 0 chromatin 0.435007926818335 0 0 0 hPsi_site_64 iPseU_CNN:0;iRNA_PseU:0 65 chr9 130550311 130550311 1 + T G UCEC 130550311 + 130550291 130550331 41 GCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCTGTC GCTGGGCTGTTGAGCAATGTGTTGGTCAAGTTCACGCTGTC Direct Loss 0.972012182699556 0 0.5951706 0 prediction 0.944024365399111 Functional Loss - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130550311 chr9:130550311 synonymous SNV . 0 21 hPsi_associated_SNPs_2024 0 0 1 0 2 Endoplasmic reticulum 0.438730980916735 0 0.1903412 0 hPsi_site_65 iPseU_CNN:0.1903412;iRNA_PseU:0 66 chr6 44219805 44219805 1 + T C STAD 44219805 + 44219785 44219825 41 GAAACGGGGCTTCGAGGTGGTATATATGACCGAGCCCATTG GAAACGGGGCTTCGAGGTGGCATATATGACCGAGCCCATTG Direct Loss 0.971815538197138 0 0.94641554 0 prediction 0.943631076394276 Functional Loss - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219805 chr6:44219805 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_2025 0 0 1 0 1 Nucleus 0.438719358572653 0 0.89283108 0 hPsi_site_66 iPseU_CNN:0.89283108;iRNA_PseU:0 67 chr19 18545341 18545341 1 + A C rs10442 18545341 - 18545321 18545361 41 AAAACCAGCTTCCATTTATTTATGGGCCCCACCCCCTGACG AAAACCAGCTTCCATTTATTGATGGGCCCCACCCCCTGACG Direct Loss 0.971665366612918 0 0.6932658 0 prediction 0.943330733225835 Functional Loss - ISYNA1;SSBP4 ENSG00000105655;ENSG00000130511 UTR3 Human other chr19:18545341 chr19:18545341 . . 0 21 hPsi_associated_SNPs_2026 0 0 0 0 0 unknown 0.438718565122793 0 0.3865316 0 hPsi_site_67 iPseU_CNN:0.3865316;iRNA_PseU:0 68 chr6 52009172 52009172 1 + T G SKCM 52009172 + 52009152 52009192 41 CCCGAGGCCACATGCTTCTTTATATCCCCATATGGATTACT CCCGAGGCCACATGCTTCTTGATATCCCCATATGGATTACT Direct Loss 0.971598354280177 0 0.53643286 0 prediction 0.943196708560354 Functional Loss - MIR206 ENSG00000207604 ncRNA_exonic Human miRNA chr6:52009172 chr6:52009172 . . 0 21 hPsi_associated_SNPs_2027 0 0 0 0 0 unknown 0.438718554637686 0 0.07286572 0 hPsi_site_68 iPseU_CNN:0.07286572;iRNA_PseU:0 69 chr11 107833033 107833033 1 + T C LAML 107833033 + 107833013 107833053 41 GGGAAGGGGTTAAAAGTGGTTTTGTTCCAAATACTGTGCAT GGGAAGGGGTTAAAAGTGGTCTTGTTCCAAATACTGTGCAT Direct Loss 0.971589311713397 0 0.622262 0 prediction 0.943178623426795 Functional Loss - RAB39A ENSG00000179331 CDS Human protein_coding chr11:107833033 chr11:107833033 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2028 0 0 1 0 0 Nucleus 0.438719304709325 0 0.244524 0 hPsi_site_69 iPseU_CNN:0.244524;iRNA_PseU:0 70 chr1 201489424 201489424 1 + T A LUAD 201489424 + 201489404 201489444 41 GGTATCCAGTATCTCTGTGATTACCTTCATCTGCCCTCGGA GGTATCCAGTATCTCTGTGAATACCTTCATCTGCCCTCGGA Direct Loss 0.971570614972161 0 0.60841197 0 prediction 0.943141229944322 Functional Loss - RPS10P7 ENSG00000223396;ENSG00000242150 ncRNA_exonic Human other chr1:201489424 chr1:201489424 . . 0 21 hPsi_associated_SNPs_2029 0 0 0 0 0 unknown 0.4387185929952 0 0.21682394 0 hPsi_site_70 iPseU_CNN:0.21682394;iRNA_PseU:0 71 chr2 70314983 70314983 1 + T C SKCM 70314983 + 70314963 70315003 41 GGGAAGAAAGGGGAGTCGGTTAAGAGGATCCGCGAGGAGAG GGGAAGAAAGGGGAGTCGGTCAAGAGGATCCGCGAGGAGAG Direct Loss 0.971179007915268 0 0.8229466 0 prediction 0.942358015830536 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70314983 chr2:70314983 synonymous SNV . 0 21 hPsi_associated_SNPs_2030 0 0 1 0 0 Cytosol 0.438718593009166 0 0.6458932 0 hPsi_site_71 iPseU_CNN:0.6458932;iRNA_PseU:0 72 chr14 105716494 105716494 1 + T C SKCM 105716494 + 105716474 105716514 41 CCCACAGCATCTTCCTGTGGTACACGGCCACCAACAAGCCC CCCACAGCATCTTCCTGTGGCACACGGCCACCAACAAGCCC Direct Loss 0.971174737193525 0 0.46991193 0 prediction 0.942349474387051 Functional Loss - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105716494 chr14:105716494 nonsynonymous SNV 0.978 2 21 hPsi_associated_SNPs_2031 0 0 1 0 0 Cytosol 0.439314384568775 0 0 0 hPsi_site_72 iPseU_CNN:0;iRNA_PseU:0 73 chr16 683013 683013 1 + T G READ 683013 + 682993 683033 41 CAGGCGGTGCAGGTTGGGGGTACGGCCAGCCTCCACTGCGA CAGGCGGTGCAGGTTGGGGGGACGGCCAGCCTCCACTGCGA Direct Loss 0.971024398691815 0 0.5353815 0 prediction 0.942048797383631 Functional Loss - WFIKKN1 ENSG00000127578 CDS Human protein_coding chr16:683013 chr16:683013 synonymous SNV . 0 21 hPsi_associated_SNPs_2032 0 0 0 0 0 exosome 0.438311177219771 0 0.0707629999999999 0 hPsi_site_73 iPseU_CNN:0.0707629999999999;iRNA_PseU:0 74 chr3 127391853 127391853 1 + T G rs533700484 127391853 + 127391833 127391873 41 CCGAGGTCGTTCGGCTCGGGTACCATCCTCCGCGCCATGGA CCGAGGTCGTTCGGCTCGGGGACCATCCTCCGCGCCATGGA Direct Loss 0.970746407895313 0 0.97094184 0 prediction 0.941492815790626 Functional Loss - ABTB1 ENSG00000114626 UTR5 Human protein_coding chr3:127391853 chr3:127391853 . . 0 21 hPsi_associated_SNPs_2033 0 0 1 0 1 exosome 0.438683667785894 0 0.94188368 0 hPsi_site_74 iPseU_CNN:0.94188368;iRNA_PseU:0 75 chr20 23016970 23016970 1 + T G rs3746726 23016970 + 23016950 23016990 41 TGGTGCAGCTGCTGAACCTCTTCGTGACCAGCCTTGATGCC TGGTGCAGCTGCTGAACCTCGTCGTGACCAGCCTTGATGCC Direct Loss 0.970746141097005 0 0.7851831 0 prediction 0.941492282194009 Functional Loss - SSTR4 ENSG00000132671 CDS Human protein_coding chr20:23016970 chr20:23016970 nonsynonymous SNV 0.971 0 21 hPsi_associated_SNPs_2034 0 0 0 0 0 exosome 0.438718563254997 0 0.5703662 0 hPsi_site_75 iPseU_CNN:0.5703662;iRNA_PseU:0 76 chr1 228400344 228400344 1 + A G BLCA 228400344 - 228400324 228400364 41 AGTTCTCCTGCGCGTCCTCGTACACCACGTGGCGCCGGCCC AGTTCTCCTGCGCGTCCTCGCACACCACGTGGCGCCGGCCC Direct Loss 0.970533088030326 0 0.879051 0 prediction 0.941066176060652 Functional Loss - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228400344 chr1:228400344 nonsynonymous SNV 0.993 2 21 hPsi_associated_SNPs_2035 0 0 0 0 0 Ribosome 0.438670292772621 0 0.758102 0 hPsi_site_76 iPseU_CNN:0.758102;iRNA_PseU:0 77 chr12 55725933 55725933 1 + T C UCEC 55725933 + 55725913 55725953 41 GTGTGCCTGGCTAAGTGGGTTTCTGACCATTTTCCCACCCC GTGTGCCTGGCTAAGTGGGTCTCTGACCATTTTCCCACCCC Direct Loss 0.970423058726329 0 0.77855957 0 prediction 0.940846117452658 Functional Loss - OR6C3 ENSG00000205329 CDS Human protein_coding chr12:55725933 chr12:55725933 nonsynonymous SNV 0.004 4 21 hPsi_associated_SNPs_2036 0 0 0 0 0 unknown 0.438718840929722 0 0.55711914 0 hPsi_site_77 iPseU_CNN:0.55711914;iRNA_PseU:0 78 chr6 27261691 27261691 1 + T G rs184907678 27261691 + 27261671 27261711 41 GGCCGGTTAGCTCAGTTGGTTAGAGCGTGCTGCTACTAATG GGCCGGTTAGCTCAGTTGGTGAGAGCGTGCTGCTACTAATG Direct Loss 0.970324768517553 0 0.71814984 0 prediction 0.940649537035106 Functional Loss - PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261691 chr6:27261691 . . 0 21 hPsi_associated_SNPs_2037 0 0 1 0 0 unknown 0.438716846954537 0 0.43629968 0 hPsi_site_78 iPseU_CNN:0.43629968;iRNA_PseU:0 79 chr12 57619018 57619018 1 + T C UCEC 57619018 + 57618998 57619038 41 TGAACGGTACCTTCAGTGTGTATTTCCGCCACAACTCGTCC TGAACGGTACCTTCAGTGTGCATTTCCGCCACAACTCGTCC Direct Loss 0.970324044161414 0 0.8556063 0 prediction 0.940648088322827 Functional Loss - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619018 chr12:57619018 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2038 0 0 1 0 0 exosome 0.438719282292923 0 0.7112126 0 hPsi_site_79 iPseU_CNN:0.7112126;iRNA_PseU:0 80 chr17 72363725 72363725 1 + T C PRAD 72363725 + 72363705 72363745 41 GACATCACTGCTGTCCTGGGTACAGAAGCATATACTGAGGA GACATCACTGCTGTCCTGGGCACAGAAGCATATACTGAGGA Direct Loss 0.970313322637899 0 0.76174915 0 prediction 0.940626645275798 Functional Loss - GPR142 ENSG00000257008 CDS Human protein_coding chr17:72363725 chr17:72363725 synonymous SNV . 0 21 hPsi_associated_SNPs_2039 0 0 0 0 0 exosome 0.439764206442514 0 0.5234983 0 hPsi_site_80 iPseU_CNN:0.5234983;iRNA_PseU:0 81 chr6 27183001 27183001 1 + T C rs560164807 27183001 + 27182981 27183021 41 GACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGC GACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC Direct Loss 0.970204265086536 0 0.32558447 0 prediction 0.940408530173072 Functional Loss - MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183001 chr6:27183001 . . 0 21 hPsi_associated_SNPs_2040 0 0 1 0 0 unknown 0.438787075434775 0 0 0 hPsi_site_81 iPseU_CNN:0;iRNA_PseU:0 82 chr17 73998146 73998146 1 + T A KIRC 73998146 + 73998126 73998166 41 AGAGGAAGCTCTATCTGGTGTTTGAGTTCCTCAGCCAGGAC AGAGGAAGCTCTATCTGGTGATTGAGTTCCTCAGCCAGGAC Direct Loss 0.970171088180053 0 0.59263986 0 prediction 0.940342176360106 Functional Loss - CDK3 ENSG00000250506 CDS Human protein_coding chr17:73998146 chr17:73998146 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2041 0 0 0 0 2 cytosol 0.438540679524248 0 0.18527972 0 hPsi_site_82 iPseU_CNN:0.18527972;iRNA_PseU:0 83 chr2 74783924 74783924 1 + T C UCEC 74783924 + 74783904 74783944 41 CAGTCCCTCCCCAGGGCCTTTATGATCTGCCTCGGGAGCCC CAGTCCCTCCCCAGGGCCTTCATGATCTGCCTCGGGAGCCC Direct Loss 0.970088120397434 0 0.3674982 0 prediction 0.940176240794868 Functional Loss - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74783924 chr2:74783924 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2042 0 0 1 0 0 Cytosol 0.438719422547545 0 0 0 hPsi_site_83 iPseU_CNN:0;iRNA_PseU:0 84 chr8 94934363 94934363 1 + T C UCEC 94934363 + 94934343 94934383 41 GGATCTATGGCACTGCATGTTACTGCCACCACAAACATCTC GGATCTATGGCACTGCATGTCACTGCCACCACAAACATCTC Direct Loss 0.969849223623137 0 0.9104409 0 prediction 0.939698447246275 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94934363 chr8:94934363 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2043 0 0 1 0 0 Ribosome 0.438642279802624 0 0.8208818 0 hPsi_site_84 iPseU_CNN:0.8208818;iRNA_PseU:0 85 chr17 7386198 7386198 1 + T A HNSC 7386198 + 7386178 7386218 41 TGGCCCTTATACTGCAGTATTATATGCTCCATGAGACTGTG TGGCCCTTATACTGCAGTATAATATGCTCCATGAGACTGTG Direct Loss 0.969846211646762 0 0.3030851 0 prediction 0.939692423293524 Functional Loss - SLC35G6 ENSG00000259224 CDS Human protein_coding chr17:7386198 chr17:7386198 nonsynonymous SNV 0.953 0 21 hPsi_associated_SNPs_2044 0 0 0 0 0 exosome 0.437082071375588 0 0 0 hPsi_site_85 iPseU_CNN:0;iRNA_PseU:0 86 chr15 83481941 83481941 1 + T A LIHC 83481941 + 83481921 83481961 41 GAAGCATACCAGGAATTGGTTACCGTGGCAACCATGTTCTT GAAGCATACCAGGAATTGGTAACCGTGGCAACCATGTTCTT Direct Loss 0.969750971914557 0 0.65367925 0 prediction 0.939501943829114 Functional Loss - WHAMM ENSG00000156232 CDS Human protein_coding chr15:83481941 chr15:83481941 synonymous SNV . 0 21 hPsi_associated_SNPs_2045 0 0 1 0 2 Nucleus 0.43871546269005 0 0.3073585 0 hPsi_site_86 iPseU_CNN:0.3073585;iRNA_PseU:0 87 chr19 813622 813622 1 + T C MESO 813622 + 813602 813642 41 GTGGCTGAAGGTCACCATGTTCTCCTTGGCCATGGGGCTGC GTGGCTGAAGGTCACCATGTCCTCCTTGGCCATGGGGCTGC Direct Loss 0.969674529280558 0 0.59368134 0 prediction 0.939349058561116 Functional Loss - PLPPR3 ENSG00000129951 CDS Human protein_coding chr19:813622 chr19:813622 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_2046 0 0 1 0 0 nucleolus 0.438718197711177 0 0.18736268 0 hPsi_site_87 iPseU_CNN:0.18736268;iRNA_PseU:0 88 chr21 34400097 34400097 1 + T C rs146665636 34400097 + 34400077 34400117 41 CCGCACCACCACGTGTCGGCTATGGGCGCCGGCAGCCTGCC CCGCACCACCACGTGTCGGCCATGGGCGCCGGCAGCCTGCC Direct Loss 0.969423259202535 0 0.659351 0 prediction 0.93884651840507 Functional Loss - OLIG2 ENSG00000205927 CDS Human protein_coding chr21:34400097 chr21:34400097 synonymous SNV . 0 21 hPsi_associated_SNPs_2047 0 0 0 0 0 exosome 0.438695975081141 0 0.318702 0 hPsi_site_88 iPseU_CNN:0.318702;iRNA_PseU:0 89 chr22 24964007 24964007 1 + T C STAD 24964007 + 24963987 24964027 41 AGTGGCACAGCTGGAGCAGGTATACATCCGTGGCAGCAAAA AGTGGCACAGCTGGAGCAGGCATACATCCGTGGCAGCAAAA Direct Loss 0.969066918946542 0 0.82286465 0 prediction 0.938133837893083 Functional Loss - SNRPD3 ENSG00000100028;ENSG00000100028 exonic;splicing Human other chr22:24964007 chr22:24964007 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_2048 0 0 1 0 1 Ribosome 0.438716294448505 0 0.6457293 0 hPsi_site_89 iPseU_CNN:0.6457293;iRNA_PseU:0 90 chr2 110373090 110373090 1 + T C UCEC 110373090 + 110373070 110373110 41 ACGCCAGGACGAGCGGGGGTTACACCGCCCTGCACTTGGCA ACGCCAGGACGAGCGGGGGTCACACCGCCCTGCACTTGGCA Direct Loss 0.968944741916449 0 0.7324315 0 prediction 0.937889483832899 Functional Loss - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373090 chr2:110373090 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_2049 0 0 1 0 0 Ribosome 0.438431181167422 0 0.464863 0 hPsi_site_90 iPseU_CNN:0.464863;iRNA_PseU:0 91 chr12 125424530 125424530 1 + T C rs140737361 125424530 + 125424510 125424550 41 TAGGGGATGTAGCTCAGTGGTAGAGCGCATGCTTTGCACGT TAGGGGATGTAGCTCAGTGGCAGAGCGCATGCTTTGCACGT Direct Loss 0.968926718107657 0 0.58679855 0 prediction 0.937853436215315 Functional Loss - MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424530 chr12:125424530 . . 0 21 hPsi_associated_SNPs_2050 0 0 1 0 0 unknown 0.438712132127869 0 0.1735971 0 hPsi_site_91 iPseU_CNN:0.1735971;iRNA_PseU:0 92 chr16 4744986 4744986 1 + T C COAD 4744986 + 4744966 4745006 41 GCCTCGTGCGGGTCCCGCTGTACACCCAGAAGGACCGAGTC GCCTCGTGCGGGTCCCGCTGCACACCCAGAAGGACCGAGTC Direct Loss 0.968253357778638 0 0.90903366 0 prediction 0.936506715557276 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4744986 chr16:4744986 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_2051 0 0 1 0 1 Ribosome 0.438479993808272 0 0.81806732 0 hPsi_site_92 iPseU_CNN:0.81806732;iRNA_PseU:0 93 chr16 4496973 4496973 1 + T A rs2304633 4496973 + 4496953 4496993 41 GCTCAGGCTCTTCTTGGGGGTACAGCCAGAGCCCAGGGCCT GCTCAGGCTCTTCTTGGGGGAACAGCCAGAGCCCAGGGCCT Direct Loss 0.968227553819984 0 0.82263875 0 prediction 0.936455107639968 Functional Loss - DNAJA3 ENSG00000103423 CDS Human protein_coding chr16:4496973 chr16:4496973 synonymous SNV . 0 21 hPsi_associated_SNPs_2052 0 0 1 0 2 Ribosome 0.438718593217433 0 0.6452775 0 hPsi_site_93 iPseU_CNN:0.6452775;iRNA_PseU:0 94 chr11 126215288 126215288 1 + T C PRAD 126215288 + 126215268 126215308 41 GAAGGGAGACCATCTGCGAGTATACCTGCACTACCTGCCCT GAAGGGAGACCATCTGCGAGCATACCTGCACTACCTGCCCT Direct Loss 0.96808904704613 0 0.35472813 0 prediction 0.93617809409226 Functional Loss - DCPS ENSG00000110063 CDS Human protein_coding chr11:126215288 chr11:126215288 nonsynonymous SNV 0.524 2 21 hPsi_associated_SNPs_2053 0 0 1 0 1 Ribosome 0.438425382803644 0 0 0 hPsi_site_94 iPseU_CNN:0;iRNA_PseU:0 95 chr18 13826185 13826185 1 + T C UCEC 13826185 + 13826165 13826205 41 TGGCCATTGCAGTGGATAGGTACGTCACCATCTTCTACGCC TGGCCATTGCAGTGGATAGGCACGTCACCATCTTCTACGCC Direct Loss 0.967522539035108 0 0.9800122 0 prediction 0.935045078070216 Functional Loss - MC5R ENSG00000176136 CDS Human protein_coding chr18:13826185 chr18:13826185 nonsynonymous SNV 0.677 5 21 hPsi_associated_SNPs_2054 0 0 0 0 0 unknown 0.438720610731442 0 0.9600244 0 hPsi_site_95 iPseU_CNN:0.9600244;iRNA_PseU:0 96 chr14 101498348 101498348 1 + T A LUAD 101498348 + 101498328 101498368 41 TAATGAGAAGTTGCCCGTGTTTTTTTCGCTTTATTTGTGAC TAATGAGAAGTTGCCCGTGTATTTTTCGCTTTATTTGTGAC Direct Loss 0.967509902179124 0 0.6951326 0 prediction 0.935019804358248 Functional Loss - MIR543 ENSG00000212040 ncRNA_exonic Human miRNA chr14:101498348 chr14:101498348 . . 0 21 hPsi_associated_SNPs_2055 0 0 0 0 0 unknown 0.438686648095262 0 0.3902652 0 hPsi_site_96 iPseU_CNN:0.3902652;iRNA_PseU:0 97 chr8 125499112 125499112 1 + T C BLCA 125499112 + 125499092 125499132 41 TTCTTCCTGTCTTACTCAGTTATGTTCTTTGGCATCACTAT TTCTTCCTGTCTTACTCAGTCATGTTCTTTGGCATCACTAT Direct Loss 0.96746679845348 0 0.3944659 0 prediction 0.934933596906961 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125499112 chr8:125499112 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2056 0 0 1 0 0 Ribosome 0.438725751153613 0 0 0 hPsi_site_97 iPseU_CNN:0;iRNA_PseU:0 98 chr9 32634260 32634260 1 + T C COAD 32634260 + 32634240 32634280 41 TTTTGTCCCTTTGTGTTTGATATCCTCCCCATCCCAGATGA TTTTGTCCCTTTGTGTTTGACATCCTCCCCATCCCAGATGA Direct Loss 0.967432471030335 0 0.6469954 0 prediction 0.93486494206067 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634260 chr9:32634260 nonsynonymous SNV 0.425 0 21 hPsi_associated_SNPs_2057 0 0 0 0 0 exosome 0.439728572324737 0 0.2939908 0 hPsi_site_98 iPseU_CNN:0.2939908;iRNA_PseU:0 99 chr11 19735396 19735396 1 + A G UCEC 19735396 - 19735376 19735416 41 TCAGGGGGATCTGGCTAGGATAGGTGGTCTTGCTCACCTCC TCAGGGGGATCTGGCTAGGACAGGTGGTCTTGCTCACCTCC Direct Loss 0.967418785642521 0 0.64926815 0 prediction 0.934837571285042 Functional Loss - NAV2 ENSG00000166833 CDS Human protein_coding chr11:19735396 chr11:19735396 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_2058 0 0 0 0 0 Nucleus 0.438722264556764 0 0.2985363 0 hPsi_site_99 iPseU_CNN:0.2985363;iRNA_PseU:0 100 chr11 5510312 5510312 1 + T C UCEC 5510312 + 5510292 5510332 41 TTGCCATGGCCTTTGATAGGTATGTGGCTATCTGTAACCCA TTGCCATGGCCTTTGATAGGCATGTGGCTATCTGTAACCCA Direct Loss 0.96731994714116 0 0.71236104 0 prediction 0.93463989428232 Functional Loss - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510312 chr11:5510312 nonsynonymous SNV 0.973 2 21 hPsi_associated_SNPs_2059 0 0 0 0 0 chromatin 0.438718584155982 0 0.42472208 0 hPsi_site_100 iPseU_CNN:0.42472208;iRNA_PseU:0 101 chr17 57918652 57918652 1 + T C COAD 57918652 + 57918632 57918672 41 GGTAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGC GGTAGCTTATCAGACTGATGCTGACTGTTGAATCTCATGGC Direct Loss 0.96714517669855 0 0.41522387 0 prediction 0.934290353397099 Functional Loss - MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918652 chr17:57918652 . . 0 21 hPsi_associated_SNPs_2060 0 0 1 0 0 unknown 0.439151144349164 0 0 0 hPsi_site_101 iPseU_CNN:0;iRNA_PseU:0 102 chr11 119054615 119054615 1 + T C COAD 119054615 + 119054595 119054635 41 GGATGCCCTCACATTGGTGCTTTCTCCTCATCCTCATGCCC GGATGCCCTCACATTGGTGCCTTCTCCTCATCCTCATGCCC Direct Loss 0.966948200961778 0 0.731313 0 prediction 0.933896401923556 Functional Loss - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119054615 chr11:119054615 nonsynonymous SNV 0.408 0 21 hPsi_associated_SNPs_2061 0 0 1 3 1 exosome 0.438675985032047 0 0.462626 0 hPsi_site_102 iPseU_CNN:0.462626;iRNA_PseU:0 103 chr16 67650722 67650722 1 + T C UCEC 67650722 + 67650702 67650742 41 AATTGGTTCGGCATCGTCGTTACAAACACACCCACGAGAAG AATTGGTTCGGCATCGTCGTCACAAACACACCCACGAGAAG Direct Loss 0.966947465305606 0 0.9155387 0 prediction 0.933894930611213 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67650722 chr16:67650722 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_2062 0 0 1 0 2 Nucleus 0.438784624879753 0 0.8310774 0 hPsi_site_103 iPseU_CNN:0.8310774;iRNA_PseU:0 104 chr17 40818820 40818820 1 + T A rs116724005 40818820 + 40818800 40818840 41 GGGCACCCAGGAGCAGTGATTTCCCTCCCCACTACTCCTTC GGGCACCCAGGAGCAGTGATATCCCTCCCCACTACTCCTTC Direct Loss 0.966924581448657 0 0.52057964 0 prediction 0.933849162897314 Functional Loss - TUBG2 ENSG00000037042 UTR3 Human protein_coding chr17:40818820 chr17:40818820 . . 0 21 hPsi_associated_SNPs_2063 0 0 1 2 0 Cytosol 0.438718562921281 0 0.04115928 0 hPsi_site_104 iPseU_CNN:0.04115928;iRNA_PseU:0 105 chr20 37356153 37356153 1 + T C UCEC 37356153 + 37356133 37356173 41 CGGCGGCTACCTGGGGTTGTTTCTCATCATCTTCGCCGCCG CGGCGGCTACCTGGGGTTGTCTCTCATCATCTTCGCCGCCG Direct Loss 0.966883259928554 0 0.37702852 0 prediction 0.933766519857108 Functional Loss - SLC32A1 ENSG00000101438 CDS Human protein_coding chr20:37356153 chr20:37356153 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2064 0 0 0 0 1 exosome 0.438718674091912 0 0 0 hPsi_site_105 iPseU_CNN:0;iRNA_PseU:0 106 chr19 18685871 18685871 1 + T C HNSC 18685871 + 18685851 18685891 41 TCCTGTCTCTGTGCAGGTGCTATGCTCGCCTTCACCCTCGT TCCTGTCTCTGTGCAGGTGCCATGCTCGCCTTCACCCTCGT Direct Loss 0.966735262313358 0 0.5752516 0 prediction 0.933470524626717 Functional Loss - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18685871 chr19:18685871 nonsynonymous SNV 0.347 2 21 hPsi_associated_SNPs_2065 0 0 1 0 1 Ribosome 0.437378018079038 0 0.1505032 0 hPsi_site_106 iPseU_CNN:0.1505032;iRNA_PseU:0 107 chr20 18163814 18163814 1 + T G UCEC 18163814 + 18163794 18163834 41 ACTGCAGCTCCTGTCACAGATTCGTTCCCACCTGCACAGGA ACTGCAGCTCCTGTCACAGAGTCGTTCCCACCTGCACAGGA Direct Loss 0.966647683149493 0 0.652195 0 prediction 0.933295366298985 Functional Loss - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18163814 chr20:18163814 nonsynonymous SNV 0.974 3 21 hPsi_associated_SNPs_2066 0 0 0 0 1 Nucleus 0.406035576485551 0 0.30439 0 hPsi_site_107 iPseU_CNN:0.30439;iRNA_PseU:0 108 chr15 74426494 74426494 1 + T C STAD 74426494 + 74426474 74426514 41 GCAACGGGGACCCCTCTCGGTACGTTTCTAACCACGCGTTC GCAACGGGGACCCCTCTCGGCACGTTTCTAACCACGCGTTC Direct Loss 0.966633736965748 0 0.71036965 0 prediction 0.933267473931496 Functional Loss - ISLR2 ENSG00000167178 CDS Human protein_coding chr15:74426494 chr15:74426494 nonsynonymous SNV 0.911 1 21 hPsi_associated_SNPs_2067 0 0 0 0 0 Nucleus 0.438718585882024 0 0.4207393 0 hPsi_site_108 iPseU_CNN:0.4207393;iRNA_PseU:0 109 chr17 57918663 57918663 1 + A C UCEC 57918663 - 57918643 57918683 41 CGACTGGTGTTGCCATGAGATTCAACAGTCAACATCAGTCT CGACTGGTGTTGCCATGAGAGTCAACAGTCAACATCAGTCT Direct Loss 0.966631931015851 0 0.27116448 0 prediction 0.933263862031703 Functional Loss - MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918663 chr17:57918663 . . 0 21 hPsi_associated_SNPs_2068 0 0 0 0 0 unknown 0.431181135503352 0 0 0 hPsi_site_109 iPseU_CNN:0;iRNA_PseU:0 110 chr4 17528572 17528572 1 + T G UCEC 17528572 + 17528552 17528592 41 AGAACAGTATGAAGAGTCGTTTTGGATCTGCGTGGCCAGCG AGAACAGTATGAAGAGTCGTGTTGGATCTGCGTGGCCAGCG Direct Loss 0.966368780241774 0 0.7473471 0 prediction 0.932737560483548 Functional Loss - CLRN2 ENSG00000249581 CDS Human protein_coding chr4:17528572 chr4:17528572 nonsynonymous SNV 0.725 5 21 hPsi_associated_SNPs_2069 0 0 0 0 0 unknown 0.4387181290286 0 0.4946942 0 hPsi_site_110 iPseU_CNN:0.4946942;iRNA_PseU:0 111 chr6 27791950 27791950 1 + T A rs199539634 27791950 + 27791930 27791970 41 GGTCTTGGCAAAGGCGGCGCTAAGCGCCACCGTAAAGTACT GGTCTTGGCAAAGGCGGCGCAAAGCGCCACCGTAAAGTACT Direct Loss 0.966211577922516 0 0.4088474 0 prediction 0.932423155845032 Functional Loss - HIST1H4J ENSG00000197238 CDS Human protein_coding chr6:27791950 chr6:27791950 synonymous SNV . 0 21 hPsi_associated_SNPs_2070 0 0 0 0 0 Ribosome 0.438718593082092 0 0 0 hPsi_site_111 iPseU_CNN:0;iRNA_PseU:0 112 chr6 41217210 41217210 1 + T C rs61734086 41217210 + 41217190 41217230 41 AGGAAGAAGTGTGAGCCTGGTTTCACCCAAGTCTGGGTGAA AGGAAGAAGTGTGAGCCTGGCTTCACCCAAGTCTGGGTGAA Direct Loss 0.965896752604695 0 0.7700124 0 prediction 0.931793505209391 Functional Loss - TREML5P ENSG00000225690 ncRNA_exonic Human unprocessed_pseudogene chr6:41217210 chr6:41217210 . . 0 21 hPsi_associated_SNPs_2071 0 0 0 0 0 unknown 0.438718592060469 0 0.5400248 0 hPsi_site_112 iPseU_CNN:0.5400248;iRNA_PseU:0 113 chr7 128356940 128356940 1 + T C STAD 128356940 + 128356920 128356960 41 CCTGGGGGTGACCTCCTCGGTACCCTGCCTGCCCCTCCCCA CCTGGGGGTGACCTCCTCGGCACCCTGCCTGCCCCTCCCCA Direct Loss 0.965814995184378 0 0.86855817 0 prediction 0.931629990368757 Functional Loss - FAM71F1 ENSG00000135248 CDS Human protein_coding chr7:128356940 chr7:128356940 nonsynonymous SNV 0.388 1 21 hPsi_associated_SNPs_2072 0 0 0 0 1 exosome 0.438714493508474 0 0.73711634 0 hPsi_site_113 iPseU_CNN:0.73711634;iRNA_PseU:0 114 chr1 110029656 110029656 1 + T G UCEC 110029656 + 110029636 110029676 41 ACATGGGCCCCTCAGCAAGCTTTATGGCCGGGCCCCACCCC ACATGGGCCCCTCAGCAAGCGTTATGGCCGGGCCCCACCCC Direct Loss 0.965796167220124 0 0.7282653 0 prediction 0.931592334440248 Functional Loss - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110029656 chr1:110029656 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2073 0 0 0 0 1 nucleoplasm 0.43871854548171 0 0.4565306 0 hPsi_site_114 iPseU_CNN:0.4565306;iRNA_PseU:0 115 chr2 220505265 220505265 1 + T C rs684428 220505265 + 220505245 220505285 41 GTATCCAGCTGTCCCAGCGTTTGTTGCTCATCCTCATGCCG GTATCCAGCTGTCCCAGCGTCTGTTGCTCATCCTCATGCCG Direct Loss 0.965718627735138 0 0.6663213 0 prediction 0.931437255470277 Functional Loss - SLC4A3 ENSG00000114923 CDS Human protein_coding chr2:220505265 chr2:220505265 synonymous SNV . 0 21 hPsi_associated_SNPs_2074 0 0 0 0 1 Cytosol 0.43872155785737 0 0.3326426 0 hPsi_site_115 iPseU_CNN:0.3326426;iRNA_PseU:0 116 chr11 55563610 55563610 1 + T A STAD 55563610 + 55563590 55563630 41 ATCTCTGTGTCTGGCTCTGATATACTCATCCCCCACCTGCT ATCTCTGTGTCTGGCTCTGAAATACTCATCCCCCACCTGCT Direct Loss 0.965157501539341 0 0.72954404 0 prediction 0.930315003078682 Functional Loss - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563610 chr11:55563610 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_2075 0 0 0 0 0 unknown 0.438725673916937 0 0.45908808 0 hPsi_site_116 iPseU_CNN:0.45908808;iRNA_PseU:0 117 chr17 4701662 4701662 1 + T A STAD 4701662 + 4701642 4701682 41 GTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAGATAC GTCAGGGGTAGAGCGGCAAGAACTTTTGGGAGACCAGATAC Direct Loss 0.965091305180092 0 0.53066576 0 prediction 0.930182610360184 Functional Loss - PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701662 chr17:4701662 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2076 0 0 1 0 1 Ribosome 0.43871839903001 0 0.06133152 0 hPsi_site_117 iPseU_CNN:0.06133152;iRNA_PseU:0 118 chr17 56408611 56408611 1 + A G UCEC 56408611 - 56408591 56408631 41 GGGTGTAGTGTTTCCTACTTTATGGATGAGTGTACTGTGGG GGGTGTAGTGTTTCCTACTTCATGGATGAGTGTACTGTGGG Direct Loss 0.964994227125104 0 0.42279077 0 prediction 0.929988454250207 Functional Loss - MIR142 ENSG00000265206 ncRNA_exonic Human antisense chr17:56408611 chr17:56408611 . . 0 21 hPsi_associated_SNPs_2077 0 0 1 0 0 unknown 0.438475223886325 0 0 0 hPsi_site_118 iPseU_CNN:0;iRNA_PseU:0 119 chr12 22218147 22218147 1 + T C UCEC 22218147 + 22218127 22218167 41 CTGCCCAGAAGGCTGTTGGATACATTTGCAAATGTAATGGT CTGCCCAGAAGGCTGTTGGACACATTTGCAAATGTAATGGT Direct Loss 0.964986955511202 0 0.7106182 0 prediction 0.929973911022405 Functional Loss - CMAS ENSG00000111726 CDS Human protein_coding chr12:22218147 chr12:22218147 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_2078 0 0 1 0 1 Ribosome 0.438748775654115 0 0.4212364 0 hPsi_site_119 iPseU_CNN:0.4212364;iRNA_PseU:0 120 chr8 55372015 55372015 1 + T C rs556983112 55372015 + 55371995 55372035 41 GGCGTGGACCCCGACCCGGCTTTCTTCGCCGCCCCGATGCC GGCGTGGACCCCGACCCGGCCTTCTTCGCCGCCCCGATGCC Direct Loss 0.964895193834012 0 0.73525256 0 prediction 0.929790387668024 Functional Loss - SOX17 ENSG00000164736 CDS Human protein_coding chr8:55372015 chr8:55372015 synonymous SNV . 0 21 hPsi_associated_SNPs_2079 0 0 0 0 0 Cytosol 0.438718592995862 0 0.47050512 0 hPsi_site_120 iPseU_CNN:0.47050512;iRNA_PseU:0 121 chr1 161134637 161134637 1 + T G UCEC 161134637 + 161134617 161134657 41 GGGCTTAGATCTGAATCGATTTTCTGCCTCCCGAGGCTCCA GGGCTTAGATCTGAATCGATGTTCTGCCTCCCGAGGCTCCA Direct Loss 0.964822773345522 0 0.76557237 0 prediction 0.929645546691044 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161134637 chr1:161134637 nonsynonymous SNV 0.989 4 21 hPsi_associated_SNPs_2080 0 0 1 0 1 Cytosol 0.438721250366355 0 0.53114474 0 hPsi_site_121 iPseU_CNN:0.53114474;iRNA_PseU:0 122 chr9 133376543 133376543 1 + T C rs10121464 133376543 + 133376523 133376563 41 TGGGGCTGCCAGGCCCCAGCTTTGTTCCCTGGTCCCCCTGA TGGGGCTGCCAGGCCCCAGCCTTGTTCCCTGGTCCCCCTGA Direct Loss 0.964797609850484 0 0.5387461 0 prediction 0.929595219700968 Functional Loss - ASS1 ENSG00000130707 UTR3 Human protein_coding chr9:133376543 chr9:133376543 . . 0 21 hPsi_associated_SNPs_2081 0 0 1 0 0 Ribosome 0.438718642592266 0 0.0774922 0 hPsi_site_122 iPseU_CNN:0.0774922;iRNA_PseU:0 123 chr14 20612261 20612261 1 + T A LUAD 20612261 + 20612241 20612281 41 TTGTGATGGCCTTTGACCGCTACATCGCCATCTGCCGGCCT TTGTGATGGCCTTTGACCGCAACATCGCCATCTGCCGGCCT Direct Loss 0.964748071218468 0 0.7830337 0 prediction 0.929496142436937 Functional Loss - OR4N5 ENSG00000184394 CDS Human protein_coding chr14:20612261 chr14:20612261 nonsynonymous SNV 0.833 3 21 hPsi_associated_SNPs_2082 0 0 0 0 0 unknown 0.438718593036465 0 0.5660674 0 hPsi_site_123 iPseU_CNN:0.5660674;iRNA_PseU:0 124 chr8 145151572 145151572 1 + T A GBM 145151572 + 145151552 145151592 41 CACTGCGGGAAGGTCTCTACTTCAACCCCTACTTTCCTGGC CACTGCGGGAAGGTCTCTACATCAACCCCTACTTTCCTGGC Direct Loss 0.96470970063079 0 0.5340515 0 prediction 0.92941940126158 Functional Loss - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151572 chr8:145151572 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2083 0 0 1 0 2 Ribosome 0.438718537490639 0 0.068103 0 hPsi_site_124 iPseU_CNN:0.068103;iRNA_PseU:0 125 chrX 102192373 102192373 1 + T C UCEC 102192373 + 102192353 102192393 41 ACGGCACGGCCGAGTCCCCGTACAGTCACCTGGGGGGAATC ACGGCACGGCCGAGTCCCCGCACAGTCACCTGGGGGGAATC Direct Loss 0.964672597431645 0 0.8567532 0 prediction 0.92934519486329 Functional Loss - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192373 chrX:102192373 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_2084 0 0 0 0 0 exosome 0.438718576107057 0 0.7135064 0 hPsi_site_125 iPseU_CNN:0.7135064;iRNA_PseU:0 126 chr11 60198313 60198313 1 + T C UCEC 60198313 + 60198293 60198333 41 ATGACCTTTTCTTTTGGAGTTATCTTCCTTTTCACCTTGTT ATGACCTTTTCTTTTGGAGTCATCTTCCTTTTCACCTTGTT Direct Loss 0.96466082720635 0 0.55963415 0 prediction 0.9293216544127 Functional Loss - MS4A5 ENSG00000166930 CDS Human protein_coding chr11:60198313 chr11:60198313 synonymous SNV . 0 21 hPsi_associated_SNPs_2085 0 0 0 0 2 unknown 0.438718576953298 0 0.1192683 0 hPsi_site_126 iPseU_CNN:0.1192683;iRNA_PseU:0 127 chr6 27861357 27861357 1 + T A SARC 27861357 + 27861337 27861377 41 AGCCGCAAAGAGAGTTACTCTATCTACGTGTACAAGGTGCT AGCCGCAAAGAGAGTTACTCAATCTACGTGTACAAGGTGCT Direct Loss 0.964587225270174 0 0.72258914 0 prediction 0.929174450540349 Functional Loss - HIST1H2BO ENSG00000196331 CDS Human other chr6:27861357 chr6:27861357 synonymous SNV . 0 21 hPsi_associated_SNPs_2086 0 0 1 0 0 exosome 0.438715583374511 0 0.44517828 0 hPsi_site_127 iPseU_CNN:0.44517828;iRNA_PseU:0 128 chr5 72798827 72798827 1 + T C UCEC 72798827 + 72798807 72798847 41 GCAGCGAACACTTTCACCATTACAGGCCATGCTGAGACAAA GCAGCGAACACTTTCACCATCACAGGCCATGCTGAGACAAA Direct Loss 0.964567186172045 0 0.3234493 0 prediction 0.929134372344091 Functional Loss - BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798827 chr5:72798827 synonymous SNV . 0 21 hPsi_associated_SNPs_2087 0 0 1 0 1 Ribosome 0.438702195031406 0 0 0 hPsi_site_128 iPseU_CNN:0;iRNA_PseU:0 129 chr1 2334492 2334492 1 + T C UCEC 2334492 + 2334472 2334512 41 AGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGG AGCACATGATTAAGTACCGGCACATCCCGTTCACACATGGG Direct Loss 0.964561131772763 0 0.96323264 0 prediction 0.929122263545527 Functional Loss - RER1 ENSG00000157916 CDS Human protein_coding chr1:2334492 chr1:2334492 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_2088 0 0 1 0 1 Ribosome 0.43871894294828 0 0.92646528 0 hPsi_site_129 iPseU_CNN:0.92646528;iRNA_PseU:0 130 chr7 24720084 24720084 1 + T C SKCM 24720084 + 24720064 24720104 41 GGCTCCGGAGCTAGAGACGTTACGTGCCATGCACAAGGCTG GGCTCCGGAGCTAGAGACGTCACGTGCCATGCACAAGGCTG Direct Loss 0.964505888660242 0 0.98202753 0 prediction 0.929011777320485 Functional Loss - MPP6 ENSG00000105926 CDS Human protein_coding chr7:24720084 chr7:24720084 nonsynonymous SNV 0.974 4 21 hPsi_associated_SNPs_2089 0 0 1 0 2 Cytosol 0.438553705413124 0 0.96405506 0 hPsi_site_130 iPseU_CNN:0.96405506;iRNA_PseU:0 131 chrX 118603838 118603838 1 + T G LIHC 118603838 + 118603818 118603858 41 TGTGGACAAGAGAACCCAGTTTTGGCTCTACTTTGCAGGGA TGTGGACAAGAGAACCCAGTGTTGGCTCTACTTTGCAGGGA Direct Loss 0.964411153886664 0 0.71735364 0 prediction 0.928822307773328 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118603838 chrX:118603838 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2090 0 0 1 0 0 Cytosol 0.438720355820351 0 0.43470728 0 hPsi_site_131 iPseU_CNN:0.43470728;iRNA_PseU:0 132 chr5 72469131 72469131 1 + T A LUAD 72469131 + 72469111 72469151 41 ATGTGTTCTCCGTCACTCCTTACACACCCAGCACCGCTGAC ATGTGTTCTCCGTCACTCCTAACACACCCAGCACCGCTGAC Direct Loss 0.964366074444039 0 0.78768873 0 prediction 0.928732148888079 Functional Loss - TMEM174 ENSG00000164325 CDS Human protein_coding chr5:72469131 chr5:72469131 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2091 0 0 0 0 0 unknown 0.436586527912658 0 0.57537746 0 hPsi_site_132 iPseU_CNN:0.57537746;iRNA_PseU:0 133 chr16 4745051 4745051 1 + T C rs59689974 4745051 + 4745031 4745071 41 AACGCCTTCGTGAGCACGGCTAAGTGCCAGCTCCTCTTTGC AACGCCTTCGTGAGCACGGCCAAGTGCCAGCTCCTCTTTGC Direct Loss 0.964311540033984 0 0.765717 0 prediction 0.928623080067968 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4745051 chr16:4745051 stoploss 0.802 0 21 hPsi_associated_SNPs_2092 0 0 0 0 1 Ribosome 0.438112757485693 0 0.531434 0 hPsi_site_133 iPseU_CNN:0.531434;iRNA_PseU:0 134 chr2 84518174 84518174 1 + T A COAD 84518174 + 84518154 84518194 41 CAACAGCTGTGGGAGGTGGATTTTTTCTCCTTCAGCTTGCA CAACAGCTGTGGGAGGTGGAATTTTTCTCCTTCAGCTTGCA Direct Loss 0.964258288163038 0 0.4011186 0 prediction 0.928516576326076 Functional Loss - FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518174 chr2:84518174 . . 0 21 hPsi_associated_SNPs_2093 0 0 0 0 0 unknown 0.438718589615323 0 0 0 hPsi_site_134 iPseU_CNN:0;iRNA_PseU:0 135 chr1 161132495 161132495 1 + T G OV 161132495 + 161132475 161132515 41 AGCTGTCTTCCAGAAATATGTTCCCTCCTTCTCTGGATACA AGCTGTCTTCCAGAAATATGGTCCCTCCTTCTCTGGATACA Direct Loss 0.964252630012116 0 0.3290261 0 prediction 0.928505260024233 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161132495 chr1:161132495 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_2094 0 0 0 0 2 Cytosol 0.438657440187687 0 0 0 hPsi_site_135 iPseU_CNN:0;iRNA_PseU:0 136 chr6 26204962 26204962 1 + T G UCEC 26204962 + 26204942 26204982 41 CGAGATAACATCCAGGGCATTACCAAGCCTGCCATCCGGCG CGAGATAACATCCAGGGCATGACCAAGCCTGCCATCCGGCG Direct Loss 0.964243613572011 0 0.67807025 0 prediction 0.928487227144022 Functional Loss - HIST1H4E ENSG00000198518 CDS Human other chr6:26204962 chr6:26204962 nonsynonymous SNV 0.222 0 21 hPsi_associated_SNPs_2095 0 0 1 0 0 Nucleus 0.438718449321433 0 0.3561405 0 hPsi_site_136 iPseU_CNN:0.3561405;iRNA_PseU:0 137 chr13 41656960 41656960 1 + T A rs371734915 41656960 + 41656940 41656980 41 ACAGTCACTTCTCTTGGAGTTATGGCAGATGGAGTGGCCCC ACAGTCACTTCTCTTGGAGTAATGGCAGATGGAGTGGCCCC Direct Loss 0.964198408805385 0 0.3914985 0 prediction 0.92839681761077 Functional Loss - WBP4 ENSG00000120688 CDS Human protein_coding chr13:41656960 chr13:41656960 synonymous SNV . 0 21 hPsi_associated_SNPs_2096 0 0 1 0 0 Cytosol 0.438718583881758 0 0 0 hPsi_site_137 iPseU_CNN:0;iRNA_PseU:0 138 chr5 92923798 92923798 1 + T C UCEC 92923798 + 92923778 92923818 41 TGCATGCAGCCCAACAACATTATGGGCATCGAGAACATCTG TGCATGCAGCCCAACAACATCATGGGCATCGAGAACATCTG Direct Loss 0.964074672843816 0 0.5624069 0 prediction 0.928149345687632 Functional Loss - NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923798 chr5:92923798 synonymous SNV . 0 21 hPsi_associated_SNPs_2097 0 0 1 0 0 nucleus 0.433797062758782 0 0.1248138 0 hPsi_site_138 iPseU_CNN:0.1248138;iRNA_PseU:0 139 chr12 49521984 49521984 1 + T C LUAD 49521984 + 49521964 49522004 41 AGCATGCACACAGCTCTCTGTACCTTGGCCAGGTCTCCACC AGCATGCACACAGCTCTCTGCACCTTGGCCAGGTCTCCACC Direct Loss 0.964031059108958 0 0.7364449 0 prediction 0.928062118217917 Functional Loss - TUBA1B ENSG00000123416 CDS Human protein_coding chr12:49521984 chr12:49521984 synonymous SNV . 0 21 hPsi_associated_SNPs_2098 0 0 0 0 0 Cytosol 0.438863923083875 0 0.4728898 0 hPsi_site_139 iPseU_CNN:0.4728898;iRNA_PseU:0 140 chr9 86238086 86238086 1 + T C rs2811903 86238086 + 86238066 86238106 41 GGAAGGAGCCGAGCTTGGGTTATGGCGGCGCCGGGCGCGCT GGAAGGAGCCGAGCTTGGGTCATGGCGGCGCCGGGCGCGCT Direct Loss 0.963821667274398 0 0.80092597 0 prediction 0.927643334548796 Functional Loss - IDNK ENSG00000148057 UTR5 Human protein_coding chr9:86238086 chr9:86238086 . . 0 21 hPsi_associated_SNPs_2099 0 0 1 0 2 Nucleus 0.438718591977646 0 0.60185194 0 hPsi_site_140 iPseU_CNN:0.60185194;iRNA_PseU:0 141 chr10 73121945 73121945 1 + T C rs1084004 73121945 + 73121925 73121965 41 ATCGAGTCCCTCAACAAGGGTTCGGGCTCACTGTGGACCAC ATCGAGTCCCTCAACAAGGGCTCGGGCTCACTGTGGACCAC Direct Loss 0.963812783688727 0 0.43980324 0 prediction 0.927625567377455 Functional Loss - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73121945 chr10:73121945 synonymous SNV . 0 21 hPsi_associated_SNPs_2100 2 1 0 1 0 chromatin 0.438718876588628 0 0 0 hPsi_site_141 iPseU_CNN:0;iRNA_PseU:0 142 chr2 99232737 99232737 1 + T G UCEC 99232737 + 99232717 99232757 41 ATGTGGAATGGGGCTATGCTTTTGATGTGCATCTCAATGCT ATGTGGAATGGGGCTATGCTGTTGATGTGCATCTCAATGCT Direct Loss 0.963797590744789 0 0.68365157 0 prediction 0.927595181489579 Functional Loss - UNC50 ENSG00000115446 CDS Human protein_coding chr2:99232737 chr2:99232737 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2101 0 0 1 0 2 Endoplasmic reticulum 0.438722052209447 0 0.36730314 0 hPsi_site_142 iPseU_CNN:0.36730314;iRNA_PseU:0 143 chr17 7259989 7259989 1 + T C rs80273373 7259989 + 7259969 7260009 41 CAGCCTCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA CAGCCTCCAGCTCTAAGGGGCATGCACTCACAACTTCCACA Direct Loss 0.963668080171572 0 0.35868055 0 prediction 0.927336160343144 Functional Loss - TMEM95 ENSG00000182896 CDS Human protein_coding chr17:7259989 chr17:7259989 synonymous SNV . 0 21 hPsi_associated_SNPs_2102 0 0 0 1 1 unknown 0.4386609399243 0 0 0 hPsi_site_143 iPseU_CNN:0;iRNA_PseU:0 144 chr12 49666105 49666105 1 + T C COAD 49666105 + 49666085 49666125 41 GTGGGGGAACTGGTTCTGGGTTCACCTCGCTGCTCATGGAA GTGGGGGAACTGGTTCTGGGCTCACCTCGCTGCTCATGGAA Direct Loss 0.963648786542308 0 0.7646816 0 prediction 0.927297573084617 Functional Loss - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666105 chr12:49666105 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2103 0 0 0 0 1 Cytosol 0.438715734062716 0 0.5293632 0 hPsi_site_144 iPseU_CNN:0.5293632;iRNA_PseU:0 145 chr1 43917153 43917153 1 + A G GBM 43917153 - 43917133 43917173 41 GCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTTCAACTG GCAGCCCCGGAGAGCTGAATCTCCCCTATCTGTTTCAACTG Direct Loss 0.96354066956163 0 0.38441613 0 prediction 0.92708133912326 Functional Loss - HYI ENSG00000178922 CDS Human protein_coding chr1:43917153 chr1:43917153 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_2104 0 0 1 0 3 Ribosome 0.438725436847589 0 0 0 hPsi_site_145 iPseU_CNN:0;iRNA_PseU:0 146 chr17 43922408 43922408 1 + T C UCEC 43922408 + 43922388 43922428 41 GTATCCTGTTCAGCTCCGACTACATCACCCTCCCCCGGGAC GTATCCTGTTCAGCTCCGACCACATCACCCTCCCCCGGGAC Direct Loss 0.963241868639143 0 0.7790899 0 prediction 0.926483737278285 Functional Loss - SPPL2C ENSG00000185294 CDS Human protein_coding chr17:43922408 chr17:43922408 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_2105 0 0 0 0 0 unknown 0.438084042052364 0 0.5581798 0 hPsi_site_146 iPseU_CNN:0.5581798;iRNA_PseU:0 147 chr2 96072786 96072786 1 + T C UCEC 96072786 + 96072766 96072806 41 TGGTGTGTGTGGGCATGAATTATGTGGACCACTGCAAAGAA TGGTGTGTGTGGGCATGAATCATGTGGACCACTGCAAAGAA Direct Loss 0.96322997557444 0 0.5681377 0 prediction 0.926459951148879 Functional Loss - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96072786 chr2:96072786 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2106 0 0 0 0 1 Ribosome 0.438865585151342 0 0.1362754 0 hPsi_site_147 iPseU_CNN:0.1362754;iRNA_PseU:0 148 chr14 54996842 54996842 1 + T C STAD 54996842 + 54996822 54996862 41 GGGGTGCAGTGTTCAAAAATTATATGAAGCTCTGCAGAAGC GGGGTGCAGTGTTCAAAAATCATATGAAGCTCTGCAGAAGC Direct Loss 0.963084194265483 0 0.30571955 0 prediction 0.926168388530967 Functional Loss - CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54996842 chr14:54996842 nonsynonymous SNV 0.797 4 21 hPsi_associated_SNPs_2107 0 0 0 1 1 Endoplasmic reticulum 0.438718573512297 0 0 0 hPsi_site_148 iPseU_CNN:0;iRNA_PseU:0 149 chr2 39944387 39944387 1 + T C UCEC 39944387 + 39944367 39944407 41 GTCTGGCAGAGACTCCACGGTATGACTGTCCTCACTGGGCC GTCTGGCAGAGACTCCACGGCATGACTGTCCTCACTGGGCC Direct Loss 0.963046912891117 0 0.67249554 0 prediction 0.926093825782233 Functional Loss - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39944387 chr2:39944387 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2108 0 0 0 0 1 exosome 0.43868433231469 0 0.34499108 0 hPsi_site_149 iPseU_CNN:0.34499108;iRNA_PseU:0 150 chr17 37826561 37826561 1 + T C MESO 37826561 + 37826541 37826581 41 GTCCGGGACCTCCGCACCTATATCATGCCTGCCCACCTTCA GTCCGGGACCTCCGCACCTACATCATGCCTGCCCACCTTCA Direct Loss 0.962882352550249 0 0.7820041 0 prediction 0.925764705100499 Functional Loss - PNMT ENSG00000141744 CDS Human protein_coding chr17:37826561 chr17:37826561 synonymous SNV . 0 21 hPsi_associated_SNPs_2109 0 0 0 0 0 Cytosol 0.438718592718471 0 0.5640082 0 hPsi_site_150 iPseU_CNN:0.5640082;iRNA_PseU:0 151 chr4 139965979 139965979 1 + T A UCEC 139965979 + 139965959 139965999 41 ACTAGGCTATCAAGGCACGTTTTTCCCCAAACCCTGGTCAC ACTAGGCTATCAAGGCACGTATTTCCCCAAACCCTGGTCAC Direct Loss 0.962811586733091 0 0.4289376 0 prediction 0.925623173466181 Functional Loss - NOCT ENSG00000151014 CDS Human protein_coding chr4:139965979 chr4:139965979 nonsynonymous SNV 0.977 1 21 hPsi_associated_SNPs_2110 0 0 1 0 0 chromatin 0.43864525221737 0 0 0 hPsi_site_151 iPseU_CNN:0;iRNA_PseU:0 152 chr15 45706807 45706807 1 + T C PRAD 45706807 + 45706787 45706827 41 AAATTCCCTTGGGAATTTGTTAGAATGGGCCTGACACAACC AAATTCCCTTGGGAATTTGTCAGAATGGGCCTGACACAACC Direct Loss 0.962665619435473 0 0.38307762 0 prediction 0.925331238870946 Functional Loss - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45706807 chr15:45706807 synonymous SNV . 0 21 hPsi_associated_SNPs_2111 0 0 1 1 1 chromatin 0.438718503930138 0 0 0 hPsi_site_152 iPseU_CNN:0;iRNA_PseU:0 153 chr16 31501798 31501798 1 + A G rs61742739 31501798 - 31501778 31501818 41 TCATGAGCAGGGCATTGAGGTTGACCACACGGGCCCAGCTC TCATGAGCAGGGCATTGAGGCTGACCACACGGGCCCAGCTC Direct Loss 0.962616574525711 0 0.4675653 0 prediction 0.925233149051423 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31501798 chr16:31501798 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2112 1 0 1 0 0 exosome 0.438722051691231 0 0 0 hPsi_site_153 iPseU_CNN:0;iRNA_PseU:0 154 chr21 31988810 31988810 1 + T C STAD 31988810 + 31988790 31988830 41 ACTATTATGGTGGCTATGGGTATGGTGGGCTTGGCTGTGGC ACTATTATGGTGGCTATGGGCATGGTGGGCTTGGCTGTGGC Direct Loss 0.962588058943485 0 0.81195295 0 prediction 0.92517611788697 Functional Loss - KRTAP20-1 ENSG00000244624 CDS Human protein_coding chr21:31988810 chr21:31988810 nonsynonymous SNV 0.014 1 21 hPsi_associated_SNPs_2113 0 0 0 0 0 unknown 0.438774560676805 0 0.6239059 0 hPsi_site_154 iPseU_CNN:0.6239059;iRNA_PseU:0 155 chr1 234510071 234510071 1 + T C STAD 234510071 + 234510051 234510091 41 GAAGTGTTTAGATGAGAACTTAGAGGATGCTTCTCAATGCA GAAGTGTTTAGATGAGAACTCAGAGGATGCTTCTCAATGCA Direct Loss 0.962456346576654 0 0.5330261 0 prediction 0.924912693153308 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234510071 chr1:234510071 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_2114 0 0 1 0 2 Cytosol 0.438353361108908 0 0.0660521999999999 0 hPsi_site_155 iPseU_CNN:0.0660521999999999;iRNA_PseU:0 156 chr12 112227694 112227694 1 + T C KIRP 112227694 + 112227674 112227714 41 TTGACGGAGACTTCTTCAGCTACACACGCCATGAACCTGTG TTGACGGAGACTTCTTCAGCCACACACGCCATGAACCTGTG Direct Loss 0.962308156944623 0 0.70268786 0 prediction 0.924616313889245 Functional Loss - ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112227694 chr12:112227694 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2115 0 0 1 0 2 chromatin 0.43868465934317 0 0.40537572 0 hPsi_site_156 iPseU_CNN:0.40537572;iRNA_PseU:0 157 chr16 31485234 31485234 1 + T C COAD 31485234 + 31485214 31485254 41 TCTTCCAGCGGTGTCTTGGGTACCGGGCTCTGTGAGCTAGA TCTTCCAGCGGTGTCTTGGGCACCGGGCTCTGTGAGCTAGA Direct Loss 0.962173359823756 0 0.6586063 0 prediction 0.924346719647513 Functional Loss - TGFB1I1 ENSG00000140682 CDS Human protein_coding chr16:31485234 chr16:31485234 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2116 0 0 0 0 2 Cytosol 0.438716040354592 0 0.3172126 0 hPsi_site_157 iPseU_CNN:0.3172126;iRNA_PseU:0 158 chr11 1651520 1651520 1 + T C CESC 1651520 + 1651500 1651540 41 GGGTCCAAGGGGGGCTGTGGTTCTTATGGCTGCTCCCAGTC GGGTCCAAGGGGGGCTGTGGCTCTTATGGCTGCTCCCAGTC Direct Loss 0.962147921909475 0 0.35658026 0 prediction 0.92429584381895 Functional Loss - KRTAP5-5 ENSG00000185940 CDS Human protein_coding chr11:1651520 chr11:1651520 synonymous SNV . 0 21 hPsi_associated_SNPs_2117 0 0 0 0 0 unknown 0.438718592995102 0 0 0 hPsi_site_158 iPseU_CNN:0;iRNA_PseU:0 159 chr12 49521825 49521825 1 + A G ESCA 49521825 - 49521805 49521845 41 TTTTCAGAGGCCCGTGAAGATATGGCTGCCCTTGAGAAGGA TTTTCAGAGGCCCGTGAAGACATGGCTGCCCTTGAGAAGGA Direct Loss 0.962112131522383 0 0.27523425 0 prediction 0.924224263044765 Functional Loss - TUBA1B ENSG00000123416 CDS Human protein_coding chr12:49521825 chr12:49521825 synonymous SNV . 0 21 hPsi_associated_SNPs_2118 0 0 1 0 0 Cytosol 0.438718591519506 0 0 0 hPsi_site_159 iPseU_CNN:0;iRNA_PseU:0 160 chr16 86601011 86601011 1 + T C STAD 86601011 + 86600991 86601031 41 CCTACCTGAGCGAGCAGAATTACTACCGGGCTGCGGGCAGC CCTACCTGAGCGAGCAGAATCACTACCGGGCTGCGGGCAGC Direct Loss 0.96203274957592 0 0.5315021 0 prediction 0.924065499151841 Functional Loss - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86601011 chr16:86601011 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_2119 0 0 0 0 0 exosome 0.438718593054687 0 0.0630042 0 hPsi_site_160 iPseU_CNN:0.0630042;iRNA_PseU:0 161 chr15 52497116 52497116 1 + T G OV 52497116 + 52497096 52497136 41 CCTTGCGCAGGAAGAGGCTGTTCAGCGTGACCGCCCCGATC CCTTGCGCAGGAAGAGGCTGGTCAGCGTGACCGCCCCGATC Direct Loss 0.962003570364298 0 0.6295901 0 prediction 0.924007140728597 Functional Loss - MYO5C ENSG00000128833 CDS Human protein_coding chr15:52497116 chr15:52497116 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2120 0 0 0 0 1 Nucleus 0.438715231208509 0 0.2591802 0 hPsi_site_161 iPseU_CNN:0.2591802;iRNA_PseU:0 162 chr1 15986468 15986468 1 + T G HNSC 15986468 + 15986448 15986488 41 CTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCC CTTGCTCGCTCTGTCTCTGCGTCAGTCTGCCCTATCAAGCC Direct Loss 0.961938689016398 0 0.6765586 0 prediction 0.923877378032796 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15986468 chr1:15986468 synonymous SNV . 0 21 hPsi_associated_SNPs_2121 0 0 1 0 0 exosome 0.43878112521407 0 0.3531172 0 hPsi_site_162 iPseU_CNN:0.3531172;iRNA_PseU:0 163 chr12 54447788 54447788 1 + T A KIRP 54447788 + 54447768 54447808 41 AAGAATATTCGCAAAATAGCTACATCCCTGAACACAGTCCG AAGAATATTCGCAAAATAGCAACATCCCTGAACACAGTCCG Direct Loss 0.961887096306909 0 0.7296252 0 prediction 0.923774192613819 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54447788 chr12:54447788 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2122 0 0 1 0 1 exosome 0.43871520607405 0 0.4592504 0 hPsi_site_163 iPseU_CNN:0.4592504;iRNA_PseU:0 164 chr4 159092200 159092200 1 + T C LUSC 159092200 + 159092180 159092220 41 GCTGCGCTTGGAGCGTAGGGTAATGTACACCACATTGGGCT GCTGCGCTTGGAGCGTAGGGCAATGTACACCACATTGGGCT Direct Loss 0.961764480338386 0 0.7945635 0 prediction 0.923528960676771 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092200 chr4:159092200 nonsynonymous SNV 0.943 4 21 hPsi_associated_SNPs_2123 0 0 0 0 0 Cytosol 0.438718585740381 0 0.589127 0 hPsi_site_164 iPseU_CNN:0.589127;iRNA_PseU:0 165 chr7 107399250 107399250 1 + T C STAD 107399250 + 107399230 107399270 41 TGCAGGTACTCCTCACTTGGTATATAGCCAAGCTCCACCTC TGCAGGTACTCCTCACTTGGCATATAGCCAAGCTCCACCTC Direct Loss 0.961527438949748 0 0.36720634 0 prediction 0.923054877899497 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107399250 chr7:107399250 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_2124 0 0 1 0 0 cytosol 0.438713851841417 0 0 0 hPsi_site_165 iPseU_CNN:0;iRNA_PseU:0 166 chr1 110883380 110883380 1 + T C COAD 110883380 + 110883360 110883400 41 AAAATTGGTTATGGTAAAGCTACACCCACCACCCGCCTCTG AAAATTGGTTATGGTAAAGCCACACCCACCACCCGCCTCTG Direct Loss 0.96146587141472 0 0.6294525 0 prediction 0.92293174282944 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883380 chr1:110883380 synonymous SNV . 0 21 hPsi_associated_SNPs_2125 0 0 1 0 0 Nucleus 0.438718489001174 0 0.258905 0 hPsi_site_166 iPseU_CNN:0.258905;iRNA_PseU:0 167 chr17 7339937 7339937 1 + T G COAD 7339937 + 7339917 7339957 41 GAAAAATCGCCTAGTGACGTTTCAGCGTCCGAGTCGCCTCA GAAAAATCGCCTAGTGACGTGTCAGCGTCCGAGTCGCCTCA Direct Loss 0.961432278813227 0 0.80347854 0 prediction 0.922864557626455 Functional Loss - TMEM102 ENSG00000181284 CDS Human protein_coding chr17:7339937 chr17:7339937 synonymous SNV . 0 21 hPsi_associated_SNPs_2126 0 0 0 0 0 exosome 0.438723097318334 0 0.60695708 0 hPsi_site_167 iPseU_CNN:0.60695708;iRNA_PseU:0 168 chr7 102065565 102065565 1 + T A KIRP 102065565 + 102065545 102065585 41 CCATGGGGCGATGACAATGTTTGCCACAGCCTCTGCCTGGA CCATGGGGCGATGACAATGTATGCCACAGCCTCTGCCTGGA Direct Loss 0.961379430620569 0 0.5450278 0 prediction 0.922758861241138 Functional Loss - LOC100630923 ENSG00000128563 CDS Human protein_coding chr7:102065565 chr7:102065565 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2127 0 0 1 1 0 unknown 0.438743564729453 0 0.0900555999999999 0 hPsi_site_168 iPseU_CNN:0.0900555999999999;iRNA_PseU:0 169 chr5 172590872 172590872 1 + T C UCEC 172590872 + 172590852 172590892 41 CTTCCTTGCGCTAGCCCTGTTTCTTGCTACGGTCCTCTATA CTTCCTTGCGCTAGCCCTGTCTCTTGCTACGGTCCTCTATA Direct Loss 0.96129485995437 0 0.6978354 0 prediction 0.922589719908741 Functional Loss - BNIP1 ENSG00000113734 CDS Human protein_coding chr5:172590872 chr5:172590872 nonsynonymous SNV 0.845 4 21 hPsi_associated_SNPs_2128 0 0 1 0 0 Ribosome 0.438718411994618 0 0.3956708 0 hPsi_site_169 iPseU_CNN:0.3956708;iRNA_PseU:0 170 chr2 133402818 133402818 1 + A G STAD 133402818 - 133402798 133402838 41 GGTTGATGACCGAGCTGAGGTAGAAAAACGTCTCCGAGAAG GGTTGATGACCGAGCTGAGGCAGAAAAACGTCTCCGAGAAG Direct Loss 0.961250974493641 0 0.6348307 0 prediction 0.922501948987282 Functional Loss - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402818 chr2:133402818 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2129 0 0 1 0 0 nucleus 0.43871859626473 0 0.2696614 0 hPsi_site_170 iPseU_CNN:0.2696614;iRNA_PseU:0 171 chr16 4559505 4559505 1 + T C GBM 4559505 + 4559485 4559525 41 GATGGGAAAGGAGACATGCGTAAATGCCCTTTCTACGCTGC GATGGGAAAGGAGACATGCGCAAATGCCCTTTCTACGCTGC Direct Loss 0.961249968335663 0 0.91367173 0 prediction 0.922499936671326 Functional Loss - HMOX2 ENSG00000103415 CDS Human protein_coding chr16:4559505 chr16:4559505 synonymous SNV . 0 21 hPsi_associated_SNPs_2130 0 0 1 0 2 Cytosol 0.438716998199967 0 0.82734346 0 hPsi_site_171 iPseU_CNN:0.82734346;iRNA_PseU:0 172 chr11 64811951 64811951 1 + T A rs61736625 64811951 + 64811931 64811971 41 GCCAGACCTTGCCTCTGGGCTTCATGGTCAACCTCTTGGCC GCCAGACCTTGCCTCTGGGCATCATGGTCAACCTCTTGGCC Direct Loss 0.961248052163381 0 0.5532102 0 prediction 0.922496104326762 Functional Loss - SAC3D1 ENSG00000168061 CDS Human protein_coding chr11:64811951 chr11:64811951 nonsynonymous SNV 0.246 0 21 hPsi_associated_SNPs_2131 0 0 1 0 0 Cytosol 0.438718623045677 0 0.1064204 0 hPsi_site_172 iPseU_CNN:0.1064204;iRNA_PseU:0 173 chr14 39591686 39591686 1 + T C rs146746499 39591686 + 39591666 39591706 41 ATTTTGTCTGGGTGAAAAGTTATGTGCTGACGGGGCTGTTG ATTTTGTCTGGGTGAAAAGTCATGTGCTGACGGGGCTGTTG Direct Loss 0.961224488396274 0 0.62124264 0 prediction 0.922448976792548 Functional Loss - GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39591686 chr14:39591686 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_2132 0 0 1 0 2 Ribosome 0.441498212377063 0 0.24248528 0 hPsi_site_173 iPseU_CNN:0.24248528;iRNA_PseU:0 174 chr2 130948224 130948224 1 + T C rs376661054 130948224 + 130948204 130948244 41 GGGCAGAGACTTGTTGCATCTTTGTCCCCAGCAAAGGCTAC GGGCAGAGACTTGTTGCATCCTTGTCCCCAGCAAAGGCTAC Direct Loss 0.961098944754875 0 0.31548846 0 prediction 0.922197889509749 Functional Loss - MZT2B ENSG00000152082 CDS Human protein_coding chr2:130948224 chr2:130948224 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_2133 0 0 1 0 0 Ribosome 0.438788102648504 0 0 0 hPsi_site_174 iPseU_CNN:0;iRNA_PseU:0 175 chr3 125648283 125648283 1 + A G rs3811679 125648283 - 125648263 125648303 41 GCTCCCTTTGGTTATGGACATACAACTCCTGGGCCAGAGGC GCTCCCTTTGGTTATGGACACACAACTCCTGGGCCAGAGGC Direct Loss 0.960955273517352 0 0.763829 0 prediction 0.921910547034705 Functional Loss - ALG1L ENSG00000189366 CDS Human protein_coding chr3:125648283 chr3:125648283 nonsynonymous SNV 0.016 0 21 hPsi_associated_SNPs_2134 0 0 0 0 0 exosome 0.438718592995084 0 0.527658 0 hPsi_site_175 iPseU_CNN:0.527658;iRNA_PseU:0 176 chr1 158576363 158576363 1 + T A ESCA 158576363 + 158576343 158576383 41 CTGACCAGCAATGTCTTCATTATCATAGCCATCAGGCTGGA CTGACCAGCAATGTCTTCATAATCATAGCCATCAGGCTGGA Direct Loss 0.960903808785684 0 0.39601067 0 prediction 0.921807617571368 Functional Loss - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576363 chr1:158576363 synonymous SNV . 0 21 hPsi_associated_SNPs_2135 0 0 0 0 0 unknown 0.439554530539073 0 0 0 hPsi_site_176 iPseU_CNN:0;iRNA_PseU:0 177 chr3 184086052 184086052 1 + T A rs41543313 184086052 + 184086032 184086072 41 TTCGAGGTGGACTCCAGAGTTTATCTCCTGATGAAGAAGCT TTCGAGGTGGACTCCAGAGTATATCTCCTGATGAAGAAGCT Direct Loss 0.960866649420824 0 0.5595751 0 prediction 0.921733298841647 Functional Loss - POLR2H ENSG00000163882 CDS Human protein_coding chr3:184086052 chr3:184086052 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2136 0 0 1 1 1 Ribosome 0.438601433406034 0 0.1191502 0 hPsi_site_177 iPseU_CNN:0.1191502;iRNA_PseU:0 178 chr6 53516876 53516876 1 + T C rs6928338 53516876 + 53516856 53516896 41 GAGCGCGAGTAGGCGTTGGCTATGTAGCCTCCGGTCACCAG GAGCGCGAGTAGGCGTTGGCCATGTAGCCTCCGGTCACCAG Direct Loss 0.96067736313294 0 0.3969654 0 prediction 0.921354726265881 Functional Loss - KLHL31 ENSG00000124743 CDS Human protein_coding chr6:53516876 chr6:53516876 nonsynonymous SNV 0.985 1 21 hPsi_associated_SNPs_2137 0 0 0 0 0 exosome 0.438616001425102 0 0 0 hPsi_site_178 iPseU_CNN:0;iRNA_PseU:0 179 chr5 140048263 140048263 1 + T C MESO 140048263 + 140048243 140048283 41 ACTGGGGATGACACAGGTGGTATCTGTCTCTGGGACCAGCG ACTGGGGATGACACAGGTGGCATCTGTCTCTGGGACCAGCG Direct Loss 0.96062521645894 0 0.73802114 0 prediction 0.92125043291788 Functional Loss - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140048263 chr5:140048263 synonymous SNV . 0 21 hPsi_associated_SNPs_2138 0 0 1 0 0 Ribosome 0.439465438329596 0 0.47604228 0 hPsi_site_179 iPseU_CNN:0.47604228;iRNA_PseU:0 180 chr4 25315722 25315722 1 + T G UCEC 25315722 + 25315702 25315742 41 GAAAGAAGAAACTCGGAGGTTTTATGCCTGTTCAGCCTGTA GAAAGAAGAAACTCGGAGGTGTTATGCCTGTTCAGCCTGTA Direct Loss 0.96059260855834 0 0.7505516 0 prediction 0.921185217116679 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25315722 chr4:25315722 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_2139 0 0 1 0 2 chromatin 0.438727348133737 0 0.5011032 0 hPsi_site_180 iPseU_CNN:0.5011032;iRNA_PseU:0 181 chr1 1407372 1407372 1 + T C rs188574574 1407372 + 1407352 1407392 41 GAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCC GAGGGCGGCGGGGACCGCGGCTTGGGAGACCGGCCGGCGCC Direct Loss 0.960525969822976 0 0.77482665 0 prediction 0.921051939645952 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1407372 chr1:1407372 synonymous SNV . 0 21 hPsi_associated_SNPs_2140 0 0 1 0 1 Ribosome 0.438714441217041 0 0.5496533 0 hPsi_site_181 iPseU_CNN:0.5496533;iRNA_PseU:0 182 chr17 7215536 7215536 1 + T C rs1054378 7215536 + 7215516 7215556 41 TGGTCTGGTCCCCTGTTGCCTATAGCCCTTTACCCTGAGCA TGGTCTGGTCCCCTGTTGCCCATAGCCCTTTACCCTGAGCA Direct Loss 0.960483520028367 0 0.321792 0 prediction 0.920967040056734 Functional Loss - EIF5A ENSG00000132507 UTR3 Human protein_coding chr17:7215536 chr17:7215536 . . 0 21 hPsi_associated_SNPs_2141 0 0 1 0 0 Ribosome 0.438718592990663 0 0 0 hPsi_site_182 iPseU_CNN:0;iRNA_PseU:0 183 chr7 140402697 140402697 1 + T C COAD 140402697 + 140402677 140402717 41 GTGTGCACATTGAGCCCCGGTATAGACAGTTCCCCCAGCTG GTGTGCACATTGAGCCCCGGCATAGACAGTTCCCCCAGCTG Direct Loss 0.960457050418411 0 0.5914621 0 prediction 0.920914100836822 Functional Loss - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140402697 chr7:140402697 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2142 0 0 1 0 1 Ribosome 0.438718593034569 0 0.1829242 0 hPsi_site_183 iPseU_CNN:0.1829242;iRNA_PseU:0 184 chr14 24785076 24785076 1 + T G UCEC 24785076 + 24785056 24785096 41 GTATTGCTCACTGCTCCCTTTTTCCTTCACTTCCTGGCCCA GTATTGCTCACTGCTCCCTTGTTCCTTCACTTCCTGGCCCA Direct Loss 0.96041709668414 0 0.4314944 0 prediction 0.920834193368279 Functional Loss - LTB4R ENSG00000213903 CDS Human protein_coding chr14:24785076 chr14:24785076 nonsynonymous SNV 0.994 0 21 hPsi_associated_SNPs_2143 0 0 1 0 0 Nucleus 0.43871859583623 0 0 0 hPsi_site_184 iPseU_CNN:0;iRNA_PseU:0 185 chr13 25671349 25671349 1 + T A LUAD 25671349 + 25671329 25671369 41 CAGCAAAGGGTTTGGTTTTGTATGTTTCTCCTCCCCAGAAG CAGCAAAGGGTTTGGTTTTGAATGTTTCTCCTCCCCAGAAG Direct Loss 0.960302509163084 0 0.43177232 0 prediction 0.920605018326168 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671349 chr13:25671349 nonsynonymous SNV 0.513 3 21 hPsi_associated_SNPs_2144 0 0 0 0 0 Cytosol 0.438721281214989 0 0 0 hPsi_site_185 iPseU_CNN:0;iRNA_PseU:0 186 chr17 16335401 16335401 1 + T C UCEC 16335401 + 16335381 16335421 41 AACGGGGCCCAGTACAGGGGTATCCTGGAAGCCTCCTTGGA AACGGGGCCCAGTACAGGGGCATCCTGGAAGCCTCCTTGGA Direct Loss 0.960259096087566 0 0.85242057 0 prediction 0.920518192175132 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335401 chr17:16335401 synonymous SNV . 0 21 hPsi_associated_SNPs_2145 0 0 1 0 0 Endoplasmic reticulum 0.438718592372724 0 0.70484114 0 hPsi_site_186 iPseU_CNN:0.70484114;iRNA_PseU:0 187 chr8 104388043 104388043 1 + T C UCEC 104388043 + 104388023 104388063 41 GGGGCCAATGGCATTCCGGGTACACCTGGGATCCCAGGTCG GGGGCCAATGGCATTCCGGGCACACCTGGGATCCCAGGTCG Direct Loss 0.96015545648532 0 0.84164 0 prediction 0.920310912970639 Functional Loss - CTHRC1 ENSG00000164932 CDS Human protein_coding chr8:104388043 chr8:104388043 synonymous SNV . 0 21 hPsi_associated_SNPs_2146 0 0 0 0 1 nucleus 0.438718905033859 0 0.68328 0 hPsi_site_187 iPseU_CNN:0.68328;iRNA_PseU:0 188 chr19 45452453 45452453 1 + T C UCEC 45452453 + 45452433 45452473 41 GCACAGCAGCCATGAGCACTTACACAGGCATTTTTACTGAC GCACAGCAGCCATGAGCACTCACACAGGCATTTTTACTGAC Direct Loss 0.960140032078869 0 0.3459646 0 prediction 0.920280064157738 Functional Loss - APOC2 ENSG00000224916;ENSG00000234906 CDS Human other chr19:45452453 chr19:45452453 nonsynonymous SNV 0.728 4 21 hPsi_associated_SNPs_2147 0 0 1 0 1 cytosol 0.417912181517251 0 0 0 hPsi_site_188 iPseU_CNN:0;iRNA_PseU:0 189 chr19 9361989 9361989 1 + T G HNSC 9361989 + 9361969 9362009 41 CTGTCCTTGGCTGACATCGGTTTCACCTCCACCACGGTCCC CTGTCCTTGGCTGACATCGGGTTCACCTCCACCACGGTCCC Direct Loss 0.960132130681545 0 0.5387127 0 prediction 0.92026426136309 Functional Loss - OR7E24 ENSG00000237521 CDS Human protein_coding chr19:9361989 chr19:9361989 synonymous SNV . 0 21 hPsi_associated_SNPs_2148 0 0 0 0 0 unknown 0.438718536495975 0 0.0774254000000001 0 hPsi_site_189 iPseU_CNN:0.0774254000000001;iRNA_PseU:0 190 chr2 85824251 85824251 1 + T C rs6643 85824251 + 85824231 85824271 41 ATTCCTGTCCCTTGTGCCGCTATGAGCTGCCCACTGATGAC ATTCCTGTCCCTTGTGCCGCCATGAGCTGCCCACTGATGAC Direct Loss 0.960071921297697 0 0.18276966 0 prediction 0.920143842595395 Functional Loss - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85824251 chr2:85824251 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_2149 0 0 1 0 2 Ribosome 0.438326078222383 0 0 0 hPsi_site_190 iPseU_CNN:0;iRNA_PseU:0 191 chr15 96877403 96877403 1 + T C STAD 96877403 + 96877383 96877423 41 GCCACTCGTACCTGTCCGGATATATTTCCCTGCTGTTGCGC GCCACTCGTACCTGTCCGGACATATTTCCCTGCTGTTGCGC Direct Loss 0.960055152713068 0 0.6137234 0 prediction 0.920110305426136 Functional Loss - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877403 chr15:96877403 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2150 0 0 1 0 1 Cytoplasm 0.438718585817821 0 0.2274468 0 hPsi_site_191 iPseU_CNN:0.2274468;iRNA_PseU:0 192 chr9 124929066 124929066 1 + T C UCEC 124929066 + 124929046 124929086 41 GGATGGAGGGCAAAGCCAAGTACATCCTCCCTACCGAAACA GGATGGAGGGCAAAGCCAAGCACATCCTCCCTACCGAAACA Direct Loss 0.959981074106435 0 0.65391785 0 prediction 0.91996214821287 Functional Loss - MORN5 ENSG00000185681 CDS Human protein_coding chr9:124929066 chr9:124929066 nonsynonymous SNV 0.908 4 21 hPsi_associated_SNPs_2151 0 0 0 0 1 unknown 0.438718592573462 0 0.3078357 0 hPsi_site_192 iPseU_CNN:0.3078357;iRNA_PseU:0 193 chr12 113515335 113515335 1 + T G ACC 113515335 + 113515315 113515355 41 GGCGCATGGACGGCCTACGATATGGACATCTGCATCACCAT GGCGCATGGACGGCCTACGAGATGGACATCTGCATCACCAT Direct Loss 0.959945868893468 0 0.38952643 0 prediction 0.919891737786936 Functional Loss - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113515335 chr12:113515335 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_2152 0 0 0 0 0 Endoplasmic reticulum 0.438217474690203 0 0 0 hPsi_site_193 iPseU_CNN:0;iRNA_PseU:0 194 chrX 32235111 32235111 1 + T C BLCA 32235111 + 32235091 32235131 41 AGAAACTGTTCAGCTTCTGTTAGCCACTGATTAAATATCTT AGAAACTGTTCAGCTTCTGTCAGCCACTGATTAAATATCTT Direct Loss 0.959850082326478 0 0.33351263 0 prediction 0.919700164652956 Functional Loss - DMD ENSG00000198947 CDS Human protein_coding chrX:32235111 chrX:32235111 synonymous SNV . 0 21 hPsi_associated_SNPs_2153 0 0 0 0 0 chromatin 0.438718668941735 0 0 0 hPsi_site_194 iPseU_CNN:0;iRNA_PseU:0 195 chr14 50360902 50360902 1 + T C UCEC 50360902 + 50360882 50360922 41 GGATTCGGGACAGGAACTGGTATGTGCAGCCCTCCTGTGCC GGATTCGGGACAGGAACTGGCATGTGCAGCCCTCCTGTGCC Direct Loss 0.959803600946129 0 0.8090397 0 prediction 0.919607201892258 Functional Loss - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360902 chr14:50360902 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2154 0 0 1 0 0 Cytosol 0.438698487096083 0 0.6180794 0 hPsi_site_195 iPseU_CNN:0.6180794;iRNA_PseU:0 196 chr1 156849044 156849044 1 + T G UCEC 156849044 + 156849024 156849064 41 TGTACCTGGCGGGTCTGCATTTTGTGCACCGGGACCTGGCC TGTACCTGGCGGGTCTGCATGTTGTGCACCGGGACCTGGCC Direct Loss 0.959657573616017 0 0.5935627 0 prediction 0.919315147232035 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156849044 chr1:156849044 nonsynonymous SNV 0.988 5 21 hPsi_associated_SNPs_2155 0 0 1 0 0 chromatin 0.438745725039893 0 0.1871254 0 hPsi_site_196 iPseU_CNN:0.1871254;iRNA_PseU:0 197 chr2 203157577 203157577 1 + T C UCEC 203157577 + 203157557 203157597 41 ATGGCCATTGCACCCAATGTTACAGTCATGGTTGGGGAATT ATGGCCATTGCACCCAATGTCACAGTCATGGTTGGGGAATT Direct Loss 0.959511506133803 0 0.66039455 0 prediction 0.919023012267607 Functional Loss - NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157577 chr2:203157577 synonymous SNV . 0 21 hPsi_associated_SNPs_2156 0 0 1 0 2 Nucleus 0.438716241740657 0 0.3207891 0 hPsi_site_197 iPseU_CNN:0.3207891;iRNA_PseU:0 198 chr16 2011186 2011186 1 + T C COAD 2011186 + 2011166 2011206 41 GGCAGCACGCAAAGAACAGGTATTACTACTACCACCGGCAG GGCAGCACGCAAAGAACAGGCATTACTACTACCACCGGCAG Direct Loss 0.959490400641454 0 0.46117088 0 prediction 0.918980801282908 Functional Loss - NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011186 chr16:2011186 nonsynonymous SNV 0.741 1 21 hPsi_associated_SNPs_2157 0 0 1 0 1 Ribosome 0.43872025049206 0 0 0 hPsi_site_198 iPseU_CNN:0;iRNA_PseU:0 199 chr19 52196094 52196094 1 + T C SKCM 52196094 + 52196074 52196114 41 GACACCCAAGGAGATCACTATACGGCCTCCTAGCTTTCCCC GACACCCAAGGAGATCACTACACGGCCTCCTAGCTTTCCCC Direct Loss 0.959476474951422 0 0.84862363 0 prediction 0.918952949902845 Functional Loss - MIRLET7E;SPACA6P-AS ENSG00000198972;ENSG00000269959 ncRNA_exonic Human other chr19:52196094 chr19:52196094 . . 0 21 hPsi_associated_SNPs_2158 0 0 1 0 0 unknown 0.438718593001506 0 0.69724726 0 hPsi_site_199 iPseU_CNN:0.69724726;iRNA_PseU:0 200 chr5 175919208 175919208 1 + T G STAD 175919208 + 175919188 175919228 41 TCCCCAGGTTTGCTCTTCGTTTTATACGGCCTGACCCTCGC TCCCCAGGTTTGCTCTTCGTGTTATACGGCCTGACCCTCGC Direct Loss 0.959468869529344 0 0.8266128 0 prediction 0.918937739058688 Functional Loss - FAF2 ENSG00000113194 CDS Human protein_coding chr5:175919208 chr5:175919208 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2159 0 0 1 0 1 Endoplasmic reticulum 0.438718598394061 0 0.6532256 0 hPsi_site_200 iPseU_CNN:0.6532256;iRNA_PseU:0 201 chr1 101704914 101704914 1 + T A UCEC 101704914 + 101704894 101704934 41 TCTGCGGGAAGGGAGTATGTTTGTGGCCCTGTCAGCCTCCG TCTGCGGGAAGGGAGTATGTATGTGGCCCTGTCAGCCTCCG Direct Loss 0.959446749781507 0 0.77646124 0 prediction 0.918893499563013 Functional Loss - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101704914 chr1:101704914 nonsynonymous SNV 0.821 4 21 hPsi_associated_SNPs_2160 0 0 0 0 0 Endoplasmic reticulum 0.438720999203172 0 0.55292248 0 hPsi_site_201 iPseU_CNN:0.55292248;iRNA_PseU:0 202 chr10 112838385 112838385 1 + T C UCEC 112838385 + 112838365 112838405 41 AGATCAACGACCAGAAGTGGTACGTCATCTCGTCGTGCATC AGATCAACGACCAGAAGTGGCACGTCATCTCGTCGTGCATC Direct Loss 0.959287721007722 0 0.96064305 0 prediction 0.918575442015443 Functional Loss - ADRA2A ENSG00000150594 CDS Human protein_coding chr10:112838385 chr10:112838385 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2161 0 0 0 0 0 exosome 0.438684494134471 0 0.9212861 0 hPsi_site_202 iPseU_CNN:0.9212861;iRNA_PseU:0 203 chr1 248551739 248551739 1 + T G STAD 248551739 + 248551719 248551759 41 AGATAAGGTCTTCTCTGCCTTTTATACCATCCTCACACCCT AGATAAGGTCTTCTCTGCCTGTTATACCATCCTCACACCCT Direct Loss 0.959261083405711 0 0.6834474 0 prediction 0.918522166811422 Functional Loss - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551739 chr1:248551739 nonsynonymous SNV 0.993 4 21 hPsi_associated_SNPs_2162 0 0 0 0 0 unknown 0.438723877436485 0 0.3668948 0 hPsi_site_203 iPseU_CNN:0.3668948;iRNA_PseU:0 204 chr13 77570129 77570129 1 + T G PRAD 77570129 + 77570109 77570149 41 CTTTTCCAACTTGGCAACTGTACATTTCCCCATCTCCGACC CTTTTCCAACTTGGCAACTGGACATTTCCCCATCTCCGACC Direct Loss 0.959257494114768 0 0.79609424 0 prediction 0.918514988229535 Functional Loss - CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570129 chr13:77570129 nonsynonymous SNV 0.995 5 21 hPsi_associated_SNPs_2163 0 0 1 0 1 Endoplasmic reticulum 0.438718593049467 0 0.59218848 0 hPsi_site_204 iPseU_CNN:0.59218848;iRNA_PseU:0 205 chr17 72926528 72926528 1 + T C PRAD 72926528 + 72926508 72926548 41 GTCATGTGGAAGAATGTGGGTAGATTCCTGGCCTCCACCCC GTCATGTGGAAGAATGTGGGCAGATTCCTGGCCTCCACCCC Direct Loss 0.959127400459804 0 0.6217766 0 prediction 0.918254800919607 Functional Loss - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72926528 chr17:72926528 synonymous SNV . 0 21 hPsi_associated_SNPs_2164 0 0 0 0 0 exosome 0.43871859380915 0 0.2435532 0 hPsi_site_205 iPseU_CNN:0.2435532;iRNA_PseU:0 206 chr2 220409549 220409549 1 + T C STAD 220409549 + 220409529 220409569 41 AACAGCCCCTGGAGCGCAGGTACCAGGCACTGCCGGCCCTC AACAGCCCCTGGAGCGCAGGCACCAGGCACTGCCGGCCCTC Direct Loss 0.959126967887984 0 0.8908258 0 prediction 0.918253935775968 Functional Loss - TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220409549 chr2:220409549 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2165 0 0 1 0 1 chromatin 0.438640310693314 0 0.7816516 0 hPsi_site_206 iPseU_CNN:0.7816516;iRNA_PseU:0 207 chr1 155290332 155290332 1 + T C STAD 155290332 + 155290312 155290352 41 TTATGGCTCTCATTGAACAGTACGCAGCACCCCTGCCCCCA TTATGGCTCTCATTGAACAGCACGCAGCACCCCTGCCCCCA Direct Loss 0.959119911955326 0 0.77234125 0 prediction 0.918239823910652 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155290332 chr1:155290332 nonsynonymous SNV 0.206 0 21 hPsi_associated_SNPs_2166 0 0 1 0 0 Cytosol 0.438718394943076 0 0.5446825 0 hPsi_site_207 iPseU_CNN:0.5446825;iRNA_PseU:0 208 chr5 126112566 126112566 1 + T C rs62391732 126112566 + 126112546 126112586 41 CAGTCCCAGGCGTCCTTCCTTACAGCCCTGAGCCTGGTCCG CAGTCCCAGGCGTCCTTCCTCACAGCCCTGAGCCTGGTCCG Direct Loss 0.958963269426348 0 0.87519896 0 prediction 0.917926538852696 Functional Loss - LMNB1 ENSG00000113368;ENSG00000251072 upstream Human other chr5:126112566 chr5:126112566 . . 0 21 hPsi_associated_SNPs_2167 1 0 0 0 0 Ribosome 0.44714660090698 0 0.75039792 0 hPsi_site_208 iPseU_CNN:0.75039792;iRNA_PseU:0 209 chr7 107557851 107557851 1 + T C UCEC 107557851 + 107557831 107557871 41 ATTGTGTGCCATCAGTGATTTACACACACCCTGAAGTTGCT ATTGTGTGCCATCAGTGATTCACACACACCCTGAAGTTGCT Direct Loss 0.95894028365633 0 0.39630038 0 prediction 0.91788056731266 Functional Loss - DLD ENSG00000091140 CDS Human protein_coding chr7:107557851 chr7:107557851 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2168 0 0 1 0 1 Cytosol 0.438629229523906 0 0 0 hPsi_site_209 iPseU_CNN:0;iRNA_PseU:0 210 chr4 3769504 3769504 1 + T C UCEC 3769504 + 3769484 3769524 41 TGGCTGTGGTCATGGGCGTGTTCGTGCTCTGCTGGTTCCCC TGGCTGTGGTCATGGGCGTGCTCGTGCTCTGCTGGTTCCCC Direct Loss 0.958891754937892 0 0.43696874 0 prediction 0.917783509875784 Functional Loss - ADRA2C ENSG00000184160 CDS Human protein_coding chr4:3769504 chr4:3769504 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2169 0 0 1 0 0 Ribosome 0.43872284721932 0 0 0 hPsi_site_210 iPseU_CNN:0;iRNA_PseU:0 211 chr22 41077457 41077457 1 + T C LUSC 41077457 + 41077437 41077477 41 AGGTGCAGTGGGCTGCGGCATACGCCTGCCCAACCCAGACA AGGTGCAGTGGGCTGCGGCACACGCCTGCCCAACCCAGACA Direct Loss 0.958886206306399 0 0.5939806 0 prediction 0.917772412612798 Functional Loss - MCHR1 ENSG00000128285 CDS Human protein_coding chr22:41077457 chr22:41077457 nonsynonymous SNV 0.984 2 21 hPsi_associated_SNPs_2170 0 0 0 0 0 exosome 0.438718479177352 0 0.1879612 0 hPsi_site_211 iPseU_CNN:0.1879612;iRNA_PseU:0 212 chr14 22133671 22133671 1 + T C LAML 22133671 + 22133651 22133691 41 GCGTATGATCGTTACGTGGCTATCTGCACTCCACTCCACTA GCGTATGATCGTTACGTGGCCATCTGCACTCCACTCCACTA Direct Loss 0.958874167717728 0 0.93546104 0 prediction 0.917748335435456 Functional Loss - OR4E2 ENSG00000221977 CDS Human protein_coding chr14:22133671 chr14:22133671 synonymous SNV . 0 21 hPsi_associated_SNPs_2171 0 0 0 0 0 unknown 0.436667954274695 0 0.87092208 0 hPsi_site_212 iPseU_CNN:0.87092208;iRNA_PseU:0 213 chr15 84868503 84868503 1 + T C rs2563934 84868503 + 84868483 84868523 41 GACATCAACAGGACCACTGTTACCATGCCCCCGCCCGTGGA GACATCAACAGGACCACTGTCACCATGCCCCCGCCCGTGGA Direct Loss 0.958838520470687 0 0.7009436 0 prediction 0.917677040941374 Functional Loss - GOLGA2P7;LOC440300 ENSG00000225151 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:84868503 chr15:84868503 . . 0 21 hPsi_associated_SNPs_2172 0 0 1 0 1 unknown 0.43877929164195 0 0.4018872 0 hPsi_site_213 iPseU_CNN:0.4018872;iRNA_PseU:0 214 chr14 60976141 60976141 1 + T G GBM 60976141 + 60976121 60976161 41 TCCAGCTGCCCATCTTGAATTTCAGCCCCCAGCAAGTGGCC TCCAGCTGCCCATCTTGAATGTCAGCCCCCAGCAAGTGGCC Direct Loss 0.95879223837969 0 0.5411531 0 prediction 0.91758447675938 Functional Loss - SIX6 ENSG00000184302 CDS Human protein_coding chr14:60976141 chr14:60976141 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2173 0 0 0 0 0 unknown 0.438718593176479 0 0.0823062000000001 0 hPsi_site_214 iPseU_CNN:0.0823062000000001;iRNA_PseU:0 215 chr1 111435097 111435097 1 + T A SKCM 111435097 + 111435077 111435117 41 CGTGGGCTCTATTATCATGGTAGTTGCCTTCCTGGGCTGCA CGTGGGCTCTATTATCATGGAAGTTGCCTTCCTGGGCTGCA Direct Loss 0.958753711166777 0 0.7384548 0 prediction 0.917507422333554 Functional Loss - CD53 ENSG00000143119 CDS Human protein_coding chr1:111435097 chr1:111435097 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_2174 0 0 1 0 1 Endoplasmic reticulum 0.438718953728214 0 0.4769096 0 hPsi_site_215 iPseU_CNN:0.4769096;iRNA_PseU:0 216 chr9 139699072 139699072 1 + A G HNSC 139699072 - 139699052 139699092 41 GCCTGGGGCTTACCCGGCGGTACTTCTCGCTGGTCTCCTTC GCCTGGGGCTTACCCGGCGGCACTTCTCGCTGGTCTCCTTC Direct Loss 0.958434446675748 0 0.8533732 0 prediction 0.916868893351496 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139699072 chr9:139699072 nonsynonymous SNV 0.966 1 21 hPsi_associated_SNPs_2175 0 0 1 0 0 chromatin 0.438718592995313 0 0.7067464 0 hPsi_site_216 iPseU_CNN:0.7067464;iRNA_PseU:0 217 chr5 233674 233674 1 + T A COAD 233674 + 233654 233694 41 AACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGT AACAGTCAAGGCGAAAGGTTAATGGAGCGATACGCCCCTGT Direct Loss 0.958426785705023 0 0.9025538 0 prediction 0.916853571410047 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:233674 chr5:233674 nonsynonymous SNV 0.984 3 21 hPsi_associated_SNPs_2176 0 0 1 0 2 Nucleus 0.438718612070268 0 0.8051076 0 hPsi_site_217 iPseU_CNN:0.8051076;iRNA_PseU:0 218 chr9 135458404 135458404 1 + T A LUAD 135458404 + 135458384 135458424 41 GCGGGGCATCCGGCCCAGGTTTGGACTCCCACCTGCAGCCC GCGGGGCATCCGGCCCAGGTATGGACTCCCACCTGCAGCCC Direct Loss 0.958415687559799 0 0.46626168 0 prediction 0.916831375119597 Functional Loss - BARHL1 ENSG00000125492 CDS Human protein_coding chr9:135458404 chr9:135458404 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2177 0 0 0 0 0 unknown 0.438718618081112 0 0 0 hPsi_site_218 iPseU_CNN:0;iRNA_PseU:0 219 chr3 98073064 98073064 1 + T A LUSC 98073064 + 98073044 98073084 41 CGACAATGGCCTATGACCGCTATGTGGCCATATGCCACCCA CGACAATGGCCTATGACCGCAATGTGGCCATATGCCACCCA Direct Loss 0.958411204658587 0 0.82883495 0 prediction 0.916822409317174 Functional Loss - OR5K4 ENSG00000196098 CDS Human protein_coding chr3:98073064 chr3:98073064 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2178 0 0 0 0 0 unknown 0.438751702720238 0 0.6576699 0 hPsi_site_219 iPseU_CNN:0.6576699;iRNA_PseU:0 220 chr20 44521454 44521454 1 + T G LUSC 44521454 + 44521434 44521474 41 TTTTCCTGACCGGGGAGAGCTATGCTGGCATCTACATCCCC TTTTCCTGACCGGGGAGAGCGATGCTGGCATCTACATCCCC Direct Loss 0.958361365942891 0 0.6324889 0 prediction 0.916722731885782 Functional Loss - CTSA ENSG00000064601 CDS Human protein_coding chr20:44521454 chr20:44521454 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2179 0 0 1 1 2 Ribosome 0.438718515955123 0 0.2649778 0 hPsi_site_220 iPseU_CNN:0.2649778;iRNA_PseU:0 221 chr7 150034690 150034690 1 + T C UCEC 150034690 + 150034670 150034710 41 CCTGGCCCAGGCGGAGCAGGTACTCAGCTCTGCGGGCCCCA CCTGGCCCAGGCGGAGCAGGCACTCAGCTCTGCGGGCCCCA Direct Loss 0.958293909431103 0 0.8583827 0 prediction 0.916587818862206 Functional Loss - LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034690 chr7:150034690 nonsynonymous SNV 0.093 0 21 hPsi_associated_SNPs_2180 0 0 1 0 0 Cytosol 0.439760178815387 0 0.7167654 0 hPsi_site_221 iPseU_CNN:0.7167654;iRNA_PseU:0 222 chr17 2227556 2227556 1 + T C UCEC 2227556 + 2227536 2227576 41 AGCCAGGGTACTGGTTCTGGTACATATGGATCATAAGTCCA AGCCAGGGTACTGGTTCTGGCACATATGGATCATAAGTCCA Direct Loss 0.95828711998493 0 0.27433753 0 prediction 0.91657423996986 Functional Loss - TSR1 ENSG00000167721 CDS Human protein_coding chr17:2227556 chr17:2227556 synonymous SNV . 0 21 hPsi_associated_SNPs_2181 0 0 1 2 0 Ribosome 0.438718553439189 0 0 0 hPsi_site_222 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 223 chr1 248344062 248344062 1 + T A COAD 248344062 + 248344042 248344082 41 ATGGAGCAGCTTTGTTCATGTACATACGGCCCACATCTGAT ATGGAGCAGCTTTGTTCATGAACATACGGCCCACATCTGAT Direct Loss 0.958282109164971 0 0.5069324 0 prediction 0.916564218329942 Functional Loss - OR2M2 ENSG00000198601 CDS Human protein_coding chr1:248344062 chr1:248344062 nonsynonymous SNV 0.003 3 21 hPsi_associated_SNPs_2182 0 0 0 0 0 exosome 0.43855654382243 0 0.0138647999999999 0 hPsi_site_223 iPseU_CNN:0.0138647999999999;iRNA_PseU:0 224 chr20 43940962 43940962 1 + T C PRAD 43940962 + 43940942 43940982 41 CGCGGGGGCCGGGAGCTGGGTACCTTCCACAGCCGCCTTAT CGCGGGGGCCGGGAGCTGGGCACCTTCCACAGCCGCCTTAT Direct Loss 0.958238960603308 0 0.8326832 0 prediction 0.916477921206616 Functional Loss - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43940962 chr20:43940962 synonymous SNV . 0 21 hPsi_associated_SNPs_2183 0 0 0 0 1 unknown 0.438718595444836 0 0.6653664 0 hPsi_site_224 iPseU_CNN:0.6653664;iRNA_PseU:0 225 chr15 45410118 45410118 1 + A T UCEC 45410118 - 45410098 45410138 41 AGGCGGGGAAGGAGTCCAGATTGGGTCCCCCTCACAGGTTA AGGCGGGGAAGGAGTCCAGAATGGGTCCCCCTCACAGGTTA Direct Loss 0.958218261962312 0 0.35399345 0 prediction 0.916436523924623 Functional Loss - DUOXA1 ENSG00000140254 CDS Human protein_coding chr15:45410118 chr15:45410118 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_2184 0 0 0 0 1 Nucleus 0.438718625658447 0 0 0 hPsi_site_225 iPseU_CNN:0;iRNA_PseU:0 226 chr12 109537036 109537036 1 + T C BLCA 109537036 + 109537016 109537056 41 AAAGAAAGCATTACACTGTTTATCCACCCCCACACCAAGTC AAAGAAAGCATTACACTGTTCATCCACCCCCACACCAAGTC Direct Loss 0.958218090275563 0 0.33989245 0 prediction 0.916436180551126 Functional Loss - UNG ENSG00000076248 CDS Human protein_coding chr12:109537036 chr12:109537036 nonsynonymous SNV 0.926 4 21 hPsi_associated_SNPs_2185 0 0 1 0 2 Ribosome 0.438716433262981 0 0 0 hPsi_site_226 iPseU_CNN:0;iRNA_PseU:0 227 chr11 5068604 5068604 1 + T C UCEC 5068604 + 5068584 5068624 41 GTTGCCAATCTCTATTTGATTATCCCACCCTCTCTCAACCC GTTGCCAATCTCTATTTGATCATCCCACCCTCTCTCAACCC Direct Loss 0.95817937951928 0 0.855849 0 prediction 0.91635875903856 Functional Loss - OR52J3 ENSG00000205495 CDS Human protein_coding chr11:5068604 chr11:5068604 synonymous SNV . 0 21 hPsi_associated_SNPs_2186 0 0 0 0 0 unknown 0.438718592995102 0 0.711698 0 hPsi_site_227 iPseU_CNN:0.711698;iRNA_PseU:0 228 chr19 16345067 16345067 1 + T C UCEC 16345067 + 16345047 16345087 41 AGGCCCTGCCCTGGGTGCGTTATATCACGCAGAATGGAGGT AGGCCCTGCCCTGGGTGCGTCATATCACGCAGAATGGAGGT Direct Loss 0.958147132076311 0 0.6139414 0 prediction 0.916294264152623 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16345067 chr19:16345067 nonsynonymous SNV 0.865 4 21 hPsi_associated_SNPs_2187 0 0 1 0 2 Ribosome 0.447083468859884 0 0.2278828 0 hPsi_site_228 iPseU_CNN:0.2278828;iRNA_PseU:0 229 chrX 23353202 23353202 1 + T G LGG 23353202 + 23353182 23353222 41 AAGATCGAGCGCAACCTCGTTAACAGCCTCTTCCCGGTCAA AAGATCGAGCGCAACCTCGTGAACAGCCTCTTCCCGGTCAA Direct Loss 0.958068460564912 0 0.9215603 0 prediction 0.916136921129824 Functional Loss - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23353202 chrX:23353202 synonymous SNV . 0 21 hPsi_associated_SNPs_2188 0 0 0 0 0 exosome 0.438718569182071 0 0.8431206 0 hPsi_site_229 iPseU_CNN:0.8431206;iRNA_PseU:0 230 chr17 38324608 38324608 1 + T C UCEC 38324608 + 38324588 38324628 41 TGAACTTTGGTAATCCCAGTTACCCTTATGCTCCAGGGGCA TGAACTTTGGTAATCCCAGTCACCCTTATGCTCCAGGGGCA Direct Loss 0.957990057783063 0 0.49506164 0 prediction 0.915980115566126 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38324608 chr17:38324608 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2189 0 0 1 0 1 Ribosome 0.438677656181252 0 0 0 hPsi_site_230 iPseU_CNN:0;iRNA_PseU:0 231 chr11 2415372 2415372 1 + T G SKCM 2415372 + 2415352 2415392 41 CTGTCATGATGTTCGTTGGCTTCCTGGGCTGCTACGGGGCC CTGTCATGATGTTCGTTGGCGTCCTGGGCTGCTACGGGGCC Direct Loss 0.957988974734508 0 0.6945255 0 prediction 0.915977949469015 Functional Loss - CD81 ENSG00000110651 CDS Human protein_coding chr11:2415372 chr11:2415372 nonsynonymous SNV 0.977 4 21 hPsi_associated_SNPs_2190 0 0 1 0 2 Ribosome 0.437996987734784 0 0.389051 0 hPsi_site_231 iPseU_CNN:0.389051;iRNA_PseU:0 232 chr17 79663968 79663968 1 + T C PRAD 79663968 + 79663948 79663988 41 GCTCCCCAATGCACGGCGTGTACATGAGCCAGCCGGCCCCT GCTCCCCAATGCACGGCGTGCACATGAGCCAGCCGGCCCCT Direct Loss 0.957864870732862 0 0.8810432 0 prediction 0.915729741465724 Functional Loss - HGS ENSG00000185359 CDS Human protein_coding chr17:79663968 chr17:79663968 nonsynonymous SNV 0.390 0 21 hPsi_associated_SNPs_2191 0 0 1 0 1 Nucleus 0.438514302986314 0 0.7620864 0 hPsi_site_232 iPseU_CNN:0.7620864;iRNA_PseU:0 233 chr1 248309161 248309161 1 + T G UCEC 248309161 + 248309141 248309181 41 GAGAGGGTCGTCGCAAAGCTTTTACTACCTGTTCCTCTCAC GAGAGGGTCGTCGCAAAGCTGTTACTACCTGTTCCTCTCAC Direct Loss 0.957822876646444 0 0.7022795 0 prediction 0.915645753292889 Functional Loss - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248309161 chr1:248309161 nonsynonymous SNV 0.001 3 21 hPsi_associated_SNPs_2192 0 0 0 0 0 unknown 0.438718592394638 0 0.404559 0 hPsi_site_233 iPseU_CNN:0.404559;iRNA_PseU:0 234 chr19 47858457 47858457 1 + T G LUAD 47858457 + 47858437 47858477 41 GAGCGGCATCTCCACAACGATTTCCTCCTGGGCGTCCTCCA GAGCGGCATCTCCACAACGAGTTCCTCCTGGGCGTCCTCCA Direct Loss 0.957722823412144 0 0.52917296 0 prediction 0.915445646824288 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858457 chr19:47858457 nonsynonymous SNV 0.798 4 21 hPsi_associated_SNPs_2193 0 0 1 0 0 Ribosome 0.439508577899994 0 0.0583459200000001 0 hPsi_site_234 iPseU_CNN:0.0583459200000001;iRNA_PseU:0 235 chr14 74825062 74825062 1 + T G UCEC 74825062 + 74825042 74825082 41 TGCTGAGTGGGCATCTCCCTTTCTGCCGCTTCCGCCTCCGC TGCTGAGTGGGCATCTCCCTGTCTGCCGCTTCCGCCTCCGC Direct Loss 0.9576394095594 0 0.65356195 0 prediction 0.9152788191188 Functional Loss - VRTN ENSG00000133980 CDS Human protein_coding chr14:74825062 chr14:74825062 nonsynonymous SNV 0.988 3 21 hPsi_associated_SNPs_2194 0 0 0 0 0 unknown 0.438718352500717 0 0.3071239 0 hPsi_site_235 iPseU_CNN:0.3071239;iRNA_PseU:0 236 chr11 71932561 71932561 1 + T G STAD 71932561 + 71932541 71932581 41 TCTGCCGCACCTTTGAGTCCTACTTCCCCACTCCAGCTGCC TCTGCCGCACCTTTGAGTCCGACTTCCCCACTCCAGCTGCC Direct Loss 0.957602764807452 0 0.49619824 0 prediction 0.915205529614904 Functional Loss - FOLR2 ENSG00000165457 CDS Human protein_coding chr11:71932561 chr11:71932561 nonsynonymous SNV 0.761 3 21 hPsi_associated_SNPs_2195 0 0 0 0 1 Cytosol 0.438718228497528 0 0 0 hPsi_site_236 iPseU_CNN:0;iRNA_PseU:0 237 chr10 105133273 105133273 1 + T G KIRC 105133273 + 105133253 105133293 41 GGGCAGAGTTGTCCCAACTTTTTTATCCTCTGTTTGTGCAC GGGCAGAGTTGTCCCAACTTGTTTATCCTCTGTTTGTGCAC Direct Loss 0.957591528624728 0 0.32048896 0 prediction 0.915183057249456 Functional Loss - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105133273 chr10:105133273 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_2196 0 0 1 0 1 cytosol 0.438723771954684 0 0 0 hPsi_site_237 iPseU_CNN:0;iRNA_PseU:0 238 chr9 36170397 36170397 1 + T C LIHC 36170397 + 36170377 36170417 41 TCAATGATGGAGTGTTTGCTTATATCATCCAGGAGAACCTG TCAATGATGGAGTGTTTGCTCATATCATCCAGGAGAACCTG Direct Loss 0.957513205471149 0 0.50617725 0 prediction 0.915026410942299 Functional Loss - CCIN ENSG00000185972 CDS Human protein_coding chr9:36170397 chr9:36170397 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2197 0 0 0 0 0 exosome 0.438612882937487 0 0.0123545 0 hPsi_site_238 iPseU_CNN:0.0123545;iRNA_PseU:0 239 chr11 123900599 123900599 1 + T C LUSC 123900599 + 123900579 123900619 41 GTGTTCCCAAGTGGCAGGGCTATCTCCTTCCACAGCTGCAT GTGTTCCCAAGTGGCAGGGCCATCTCCTTCCACAGCTGCAT Direct Loss 0.957442859785147 0 0.39675146 0 prediction 0.914885719570293 Functional Loss - OR10G8 ENSG00000234560 CDS Human protein_coding chr11:123900599 chr11:123900599 synonymous SNV . 0 21 hPsi_associated_SNPs_2198 0 0 0 0 0 unknown 0.43876998796287 0 0 0 hPsi_site_239 iPseU_CNN:0;iRNA_PseU:0 240 chr7 100201096 100201096 1 + T C UCEC 100201096 + 100201076 100201116 41 ATGTGAAGGGGGAATCAGGTTACGTGGCAAGTGAGGGGTTC ATGTGAAGGGGGAATCAGGTCACGTGGCAAGTGAGGGGTTC Direct Loss 0.957436702717377 0 0.9279777 0 prediction 0.914873405434755 Functional Loss - PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100201096 chr7:100201096 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2199 0 0 1 0 2 Endoplasmic reticulum 0.438720663226361 0 0.8559554 0 hPsi_site_240 iPseU_CNN:0.8559554;iRNA_PseU:0 241 chr19 863160 863160 1 + T G UCEC 863160 + 863140 863180 41 GTCACCTCGGGCTCGCGCGTTTGCGGCAACCGCAAGAAGCC GTCACCTCGGGCTCGCGCGTGTGCGGCAACCGCAAGAAGCC Direct Loss 0.957379099848866 0 0.5284242 0 prediction 0.914758199697732 Functional Loss - CFD ENSG00000197766 CDS Human protein_coding chr19:863160 chr19:863160 synonymous SNV . 0 21 hPsi_associated_SNPs_2200 0 0 1 0 0 Cytosol 0.438786670232959 0 0.0568484 0 hPsi_site_241 iPseU_CNN:0.0568484;iRNA_PseU:0 242 chr2 27258855 27258855 1 + T C OV 27258855 + 27258835 27258875 41 CAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCC CAGGGGAGTCACTACATGGTCACCGCATCTGTATCCAGGCC Direct Loss 0.957307847372785 0 0.67357504 0 prediction 0.914615694745571 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27258855 chr2:27258855 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_2201 0 0 1 1 2 Ribosome 0.438718433045355 0 0.34715008 0 hPsi_site_242 iPseU_CNN:0.34715008;iRNA_PseU:0 243 chr20 33764557 33764557 1 + T C LGG 33764557 + 33764537 33764577 41 TGGGCGTCCTGGTGGGCAGTTTCATCATTGCTGGTGTGGCT TGGGCGTCCTGGTGGGCAGTCTCATCATTGCTGGTGTGGCT Direct Loss 0.957295825600463 0 0.832035 0 prediction 0.914591651200926 Functional Loss - PROCR ENSG00000101000 CDS Human protein_coding chr20:33764557 chr20:33764557 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_2202 0 0 1 0 1 Endoplasmic reticulum 0.438753997417755 0 0.66407 0 hPsi_site_243 iPseU_CNN:0.66407;iRNA_PseU:0 244 chr19 56163825 56163825 1 + T C ESCA 56163825 + 56163805 56163845 41 CCGACGGGGTCCTCTGCCGGTACAAGAAGATCCTGGGCACC CCGACGGGGTCCTCTGCCGGCACAAGAAGATCCTGGGCACC Direct Loss 0.957269507953217 0 0.8050409 0 prediction 0.914539015906434 Functional Loss - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56163825 chr19:56163825 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2203 0 0 1 0 1 Cytosol 0.438673088737379 0 0.6100818 0 hPsi_site_244 iPseU_CNN:0.6100818;iRNA_PseU:0 245 chr19 3122941 3122941 1 + T C rs2240564 3122941 + 3122921 3122961 41 GGGAGACGGGGCTGGCGGGATACCCCCCCCCCGGCTTCCCC GGGAGACGGGGCTGGCGGGACACCCCCCCCCCGGCTTCCCC Direct Loss 0.957146932158725 0 0.705648 0 prediction 0.91429386431745 Functional Loss - GNA11 ENSG00000088256 UTR3 Human protein_coding chr19:3122941 chr19:3122941 . . 0 21 hPsi_associated_SNPs_2204 0 0 1 0 0 Cytosol 0.438718676857956 0 0.411296 0 hPsi_site_245 iPseU_CNN:0.411296;iRNA_PseU:0 246 chr8 8560311 8560311 1 + T C STAD 8560311 + 8560291 8560331 41 GCCTCATCCCGGTGTCCTGGTACAACCACTTCTTGGGGGAC GCCTCATCCCGGTGTCCTGGCACAACCACTTCTTGGGGGAC Direct Loss 0.956946878896339 0 0.8804342 0 prediction 0.913893757792678 Functional Loss - CLDN23 ENSG00000253958 CDS Human protein_coding chr8:8560311 chr8:8560311 nonsynonymous SNV 0.966 4 21 hPsi_associated_SNPs_2205 0 0 0 0 0 Endoplasmic reticulum 0.438718579922713 0 0.7608684 0 hPsi_site_246 iPseU_CNN:0.7608684;iRNA_PseU:0 247 chr19 10224671 10224671 1 + T C LUSC 10224671 + 10224651 10224691 41 CCTGCATCAGCCTCAACCGCTACCTGGGCATCGTGCACCCC CCTGCATCAGCCTCAACCGCCACCTGGGCATCGTGCACCCC Direct Loss 0.956937713398721 0 0.8476529 0 prediction 0.913875426797442 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224671 chr19:10224671 nonsynonymous SNV 0.150 4 21 hPsi_associated_SNPs_2206 0 0 1 0 0 unknown 0.438718300440566 0 0.6953058 0 hPsi_site_247 iPseU_CNN:0.6953058;iRNA_PseU:0 248 chr11 7111041 7111041 1 + T G GBM 7111041 + 7111021 7111061 41 GACTACCGCGAACCCCGGGGTTTTGCCCCCTCGCCCGGAGA GACTACCGCGAACCCCGGGGGTTTGCCCCCTCGCCCGGAGA Direct Loss 0.956895590380793 0 0.9165273 0 prediction 0.913791180761587 Functional Loss - RBMXL2 ENSG00000170748 CDS Human protein_coding chr11:7111041 chr11:7111041 synonymous SNV . 0 21 hPsi_associated_SNPs_2207 0 0 0 0 0 exosome 0.438718566192293 0 0.8330546 0 hPsi_site_248 iPseU_CNN:0.8330546;iRNA_PseU:0 249 chr7 129916524 129916524 1 + T C UCEC 129916524 + 129916504 129916544 41 TCCATTCTGGATGCCCTGGATATCTTCCTCCTGCCAGTCAC TCCATTCTGGATGCCCTGGACATCTTCCTCCTGCCAGTCAC Direct Loss 0.956870119173152 0 0.8255272 0 prediction 0.913740238346305 Functional Loss - CPA2 ENSG00000158516 CDS Human protein_coding chr7:129916524 chr7:129916524 synonymous SNV . 0 21 hPsi_associated_SNPs_2208 0 0 0 0 2 exosome 0.43871860223257 0 0.6510544 0 hPsi_site_249 iPseU_CNN:0.6510544;iRNA_PseU:0 250 chr6 132891851 132891851 1 + T C READ 132891851 + 132891831 132891871 41 GCTTCATCTCCATCGACAGGTACATTGCGGTTACTGACCCC GCTTCATCTCCATCGACAGGCACATTGCGGTTACTGACCCC Direct Loss 0.956773600030983 0 0.7449827 0 prediction 0.913547200061967 Functional Loss - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891851 chr6:132891851 nonsynonymous SNV 0.683 1 21 hPsi_associated_SNPs_2209 0 0 0 0 0 unknown 0.43865703200996 0 0.4899654 0 hPsi_site_250 iPseU_CNN:0.4899654;iRNA_PseU:0 251 chr14 50249133 50249133 1 + T G UCS 50249133 + 50249113 50249153 41 GATGAAGGAGAAGTAATTGTTTTTGGTGGATGTGCCAACAA GATGAAGGAGAAGTAATTGTGTTTGGTGGATGTGCCAACAA Direct Loss 0.956714604530433 0 0.9085399 0 prediction 0.913429209060867 Functional Loss - KLHDC2 ENSG00000165516 CDS Human protein_coding chr14:50249133 chr14:50249133 synonymous SNV . 0 21 hPsi_associated_SNPs_2210 0 0 1 2 2 Cytosol 0.438712856046069 0 0.8170798 0 hPsi_site_251 iPseU_CNN:0.8170798;iRNA_PseU:0 252 chr9 131012511 131012511 1 + T C LUAD 131012511 + 131012491 131012531 41 GCGACGAGATGCTGCGCATGTACCACGCACTGAAGGAGGCG GCGACGAGATGCTGCGCATGCACCACGCACTGAAGGAGGCG Direct Loss 0.956677301684468 0 0.9231669 0 prediction 0.913354603368936 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131012511 chr9:131012511 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2211 0 0 0 0 0 Endoplasmic reticulum 0.439453059439845 0 0.8463338 0 hPsi_site_252 iPseU_CNN:0.8463338;iRNA_PseU:0 253 chr7 105207629 105207629 1 + A G GBM 105207629 - 105207609 105207649 41 TGCCCTGAAGCTGACTGCAGTACATCTTTCAGCAGTAGTGC TGCCCTGAAGCTGACTGCAGCACATCTTTCAGCAGTAGTGC Direct Loss 0.956634200326867 0 0.39163178 0 prediction 0.913268400653733 Functional Loss - RINT1 ENSG00000135249 CDS Human protein_coding chr7:105207629 chr7:105207629 synonymous SNV . 0 21 hPsi_associated_SNPs_2212 0 0 0 0 0 Nucleus 0.438718855669552 0 0 0 hPsi_site_253 iPseU_CNN:0;iRNA_PseU:0 254 chr19 16060453 16060453 1 + T C rs115548355 16060453 + 16060433 16060473 41 GTCACAGCCCTGATAGGCTGTTTATTCCTCATCATCCTCTC GTCACAGCCCTGATAGGCTGCTTATTCCTCATCATCCTCTC Direct Loss 0.956588524947405 0 0.43271667 0 prediction 0.91317704989481 Functional Loss - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060453 chr19:16060453 synonymous SNV . 0 21 hPsi_associated_SNPs_2213 0 0 0 0 0 unknown 0.443355034319514 0 0 0 hPsi_site_254 iPseU_CNN:0;iRNA_PseU:0 255 chr10 112838979 112838979 1 + T C UCEC 112838979 + 112838959 112838999 41 GGTTCCCCTTCTTCTTCACCTACACGCTCACGGCCGTCGGG GGTTCCCCTTCTTCTTCACCCACACGCTCACGGCCGTCGGG Direct Loss 0.956544758097267 0 0.41876975 0 prediction 0.913089516194534 Functional Loss - ADRA2A ENSG00000150594 CDS Human protein_coding chr10:112838979 chr10:112838979 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2214 0 0 0 0 0 exosome 0.438718597909778 0 0 0 hPsi_site_255 iPseU_CNN:0;iRNA_PseU:0 256 chr2 30454612 30454612 1 + T C rs377560679 30454612 + 30454592 30454632 41 GCCCTAGGACTTCATGTCTATATATTTCCCCATTCACTGGT GCCCTAGGACTTCATGTCTACATATTTCCCCATTCACTGGT Direct Loss 0.956507812642795 0 0.53118336 0 prediction 0.91301562528559 Functional Loss - LBH ENSG00000213626 CDS Human protein_coding chr2:30454612 chr2:30454612 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2215 0 0 1 0 1 Nucleus 0.438718592943676 0 0.06236672 0 hPsi_site_256 iPseU_CNN:0.06236672;iRNA_PseU:0 257 chr13 113817388 113817388 1 + T C COAD 113817388 + 113817368 113817408 41 GCCAGGACAGCATCTGGGGCTACACCTGCACCTGCTCCCCC GCCAGGACAGCATCTGGGGCCACACCTGCACCTGCTCCCCC Direct Loss 0.95649877275078 0 0.7035933 0 prediction 0.912997545501559 Functional Loss - PROZ ENSG00000126231 CDS Human protein_coding chr13:113817388 chr13:113817388 nonsynonymous SNV 0.046 4 21 hPsi_associated_SNPs_2216 0 0 0 0 2 exosome 0.438553322359347 0 0.4071866 0 hPsi_site_257 iPseU_CNN:0.4071866;iRNA_PseU:0 258 chr2 220073014 220073014 1 + T G BLCA 220073014 + 220072994 220073034 41 AGAGCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCC AGAGCACAAGCTGTGGCTTCGACAAGCACTGTCCCCAGCCC Direct Loss 0.9564793452062 0 0.37642205 0 prediction 0.9129586904124 Functional Loss - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220073014 chr2:220073014 synonymous SNV . 0 21 hPsi_associated_SNPs_2217 0 0 1 0 2 Ribosome 0.438710458412046 0 0 0 hPsi_site_258 iPseU_CNN:0;iRNA_PseU:0 259 chr1 161726621 161726621 1 + T C STAD 161726621 + 161726601 161726641 41 AGTTGGGTTCCTTCAACTGGTATGGTGAACAGTGCTCTTGT AGTTGGGTTCCTTCAACTGGCATGGTGAACAGTGCTCTTGT Direct Loss 0.956431158512269 0 0.5235702 0 prediction 0.912862317024538 Functional Loss - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161726621 chr1:161726621 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_2218 0 0 1 0 1 Ribosome 0.438738481128164 0 0.0471404 0 hPsi_site_259 iPseU_CNN:0.0471404;iRNA_PseU:0 260 chr1 181058541 181058541 1 + T C rs190503142 181058541 + 181058521 181058561 41 CTGGGGCGTCTTCCCCGAGGTATCTCGTGCCGCGCGCCGCC CTGGGGCGTCTTCCCCGAGGCATCTCGTGCCGCGCGCCGCC Direct Loss 0.956341066651871 0 0.8920579 0 prediction 0.912682133303741 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058541 chr1:181058541 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_2219 0 0 1 0 0 chromatin 0.438718375879329 0 0.7841158 0 hPsi_site_260 iPseU_CNN:0.7841158;iRNA_PseU:0 261 chr19 46029981 46029981 1 + T C rs10156 46029981 + 46029961 46030001 41 TCACCGGGCTGGGGGTGAGATATCCCCCCACCCCAGGGACT TCACCGGGCTGGGGGTGAGACATCCCCCCACCCCAGGGACT Direct Loss 0.956313689009992 0 0.5073313 0 prediction 0.912627378019984 Functional Loss - VASP ENSG00000125753 UTR3 Human protein_coding chr19:46029981 chr19:46029981 . . 0 21 hPsi_associated_SNPs_2220 0 0 1 0 0 Ribosome 0.437765146934844 0 0.0146626000000001 0 hPsi_site_261 iPseU_CNN:0.0146626000000001;iRNA_PseU:0 262 chr4 48490599 48490599 1 + T A HNSC 48490599 + 48490579 48490619 41 GCTTCAGGTTATGGTTTAGCTACTCTCTTCCATCTTCCACC GCTTCAGGTTATGGTTTAGCAACTCTCTTCCATCTTCCACC Direct Loss 0.956230778804755 0 0.8760731 0 prediction 0.91246155760951 Functional Loss - SLC10A4 ENSG00000145248 CDS Human protein_coding chr4:48490599 chr4:48490599 synonymous SNV . 0 21 hPsi_associated_SNPs_2221 0 0 1 0 0 exosome 0.438719672781674 0 0.7521462 0 hPsi_site_262 iPseU_CNN:0.7521462;iRNA_PseU:0 263 chr1 248367144 248367144 1 + T C rs146260073 248367144 + 248367124 248367164 41 ATGGAGCAGCTTTGTTCATGTACATACGGCCCACATCTGAT ATGGAGCAGCTTTGTTCATGCACATACGGCCCACATCTGAT Direct Loss 0.956189897351567 0 0.55410177 0 prediction 0.912379794703134 Functional Loss - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248367144 chr1:248367144 nonsynonymous SNV 0.006 3 21 hPsi_associated_SNPs_2222 0 0 0 0 0 exosome 0.43855654382243 0 0.10820354 0 hPsi_site_263 iPseU_CNN:0.10820354;iRNA_PseU:0 264 chr5 236619 236619 1 + T C GBM 236619 + 236599 236639 41 GGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGCCTCG GGAGGCCGCCTGTGCCTCGGCACATGGTGCCAACCGCCTCG Direct Loss 0.956149495119553 0 0.94812596 0 prediction 0.912298990239107 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:236619 chr5:236619 nonsynonymous SNV 0.767 3 21 hPsi_associated_SNPs_2223 0 0 1 0 2 Nucleus 0.438718135337679 0 0.89625192 0 hPsi_site_264 iPseU_CNN:0.89625192;iRNA_PseU:0 265 chr20 62187650 62187650 1 + T G UCEC 62187650 + 62187630 62187670 41 GCACCAAGATGCCTGTCGTGTTTGACCGAAAGGCGTCGGCG GCACCAAGATGCCTGTCGTGGTTGACCGAAAGGCGTCGGCG Direct Loss 0.955980580862709 0 0.5628994 0 prediction 0.911961161725418 Functional Loss - FNDC11 ENSG00000125531 CDS Human protein_coding chr20:62187650 chr20:62187650 nonsynonymous SNV 0.732 4 21 hPsi_associated_SNPs_2224 0 0 0 0 0 exosome 0.438718591284872 0 0.1257988 0 hPsi_site_265 iPseU_CNN:0.1257988;iRNA_PseU:0 266 chr1 165533015 165533015 1 + T C UCEC 165533015 + 165532995 165533035 41 GGAAGTCAGCCGGCGGATTTTTCAAACCCAGACGAGCTCGG GGAAGTCAGCCGGCGGATTTCTCAAACCCAGACGAGCTCGG Direct Loss 0.95590897357475 0 0.7239557 0 prediction 0.9118179471495 Functional Loss - LRRC52 ENSG00000162763 CDS Human protein_coding chr1:165533015 chr1:165533015 nonsynonymous SNV 0.096 0 21 hPsi_associated_SNPs_2225 0 0 0 0 0 unknown 0.442652676305338 0 0.4479114 0 hPsi_site_266 iPseU_CNN:0.4479114;iRNA_PseU:0 267 chr3 142503609 142503609 1 + T C UCEC 142503609 + 142503589 142503629 41 GGTTTGGACAGATGTCGGGTTACCGACGCAAGCCCACCTGT GGTTTGGACAGATGTCGGGTCACCGACGCAAGCCCACCTGT Direct Loss 0.955859771826867 0 0.8146242 0 prediction 0.911719543653735 Functional Loss - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142503609 chr3:142503609 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2226 0 0 1 0 1 Ribosome 0.438719208626291 0 0.6292484 0 hPsi_site_267 iPseU_CNN:0.6292484;iRNA_PseU:0 268 chr10 23481613 23481613 1 + T C HNSC 23481613 + 23481593 23481633 41 ACGAGCAGGCCGAGGTGGAGTTCCTTAGCCACCAGCTCCAC ACGAGCAGGCCGAGGTGGAGCTCCTTAGCCACCAGCTCCAC Direct Loss 0.955846396521147 0 0.56519884 0 prediction 0.911692793042294 Functional Loss - PTF1A ENSG00000168267 CDS Human protein_coding chr10:23481613 chr10:23481613 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2227 0 0 0 0 0 exosome 0.438718523131337 0 0.13039768 0 hPsi_site_268 iPseU_CNN:0.13039768;iRNA_PseU:0 269 chr2 96993864 96993864 1 + T G UCEC 96993864 + 96993844 96993884 41 ATTTCCTCATTGGTAACAATTTTCTGCCCCTGACCATCCCA ATTTCCTCATTGGTAACAATGTTCTGCCCCTGACCATCCCA Direct Loss 0.955832266910954 0 0.46074596 0 prediction 0.911664533821909 Functional Loss - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96993864 chr2:96993864 nonsynonymous SNV 0.776 0 21 hPsi_associated_SNPs_2228 0 0 0 0 0 Endoplasmic reticulum 0.438712510108395 0 0 0 hPsi_site_269 iPseU_CNN:0;iRNA_PseU:0 270 chr15 65862455 65862455 1 + T C UCEC 65862455 + 65862435 65862475 41 GGAAGAAATTTTATTTTGTTTATCATCTTTGGCACCATGGA GGAAGAAATTTTATTTTGTTCATCATCTTTGGCACCATGGA Direct Loss 0.955794603253886 0 0.28738567 0 prediction 0.911589206507771 Functional Loss - HACD3 ENSG00000074696 CDS Human protein_coding chr15:65862455 chr15:65862455 synonymous SNV . 0 21 hPsi_associated_SNPs_2229 0 0 1 6 2 Ribosome 0.438276275762417 0 0 0 hPsi_site_270 iPseU_CNN:0;iRNA_PseU:0 271 chrX 153668789 153668789 1 + T C UCEC 153668789 + 153668769 153668809 41 ACAGTGAGTCCCTGGCCCGGTATGGCAAGAGCCCATATTTA ACAGTGAGTCCCTGGCCCGGCATGGCAAGAGCCCATATTTA Direct Loss 0.955715123355308 0 0.782041 0 prediction 0.911430246710615 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153668789 chrX:153668789 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_2230 0 0 1 0 2 Cytosol 0.438718592995102 0 0.564082 0 hPsi_site_271 iPseU_CNN:0.564082;iRNA_PseU:0 272 chr11 119031653 119031653 1 + T C LUSC 119031653 + 119031633 119031673 41 GCGAGGAGACCTGACATGTTTAGAGGAACGCTGCCCGTTCC GCGAGGAGACCTGACATGTTCAGAGGAACGCTGCCCGTTCC Direct Loss 0.955574247982617 0 0.6417144 0 prediction 0.911148495965235 Functional Loss - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119031653 chr11:119031653 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_2231 0 0 0 0 1 exosome 0.438715140027559 0 0.2834288 0 hPsi_site_272 iPseU_CNN:0.2834288;iRNA_PseU:0 273 chr3 133302927 133302927 1 + T C KIRC 133302927 + 133302907 133302947 41 GGTGGAGGTGGTGGTGGAGGTATGGAAAAATCTTCAGGTCC GGTGGAGGTGGTGGTGGAGGCATGGAAAAATCTTCAGGTCC Direct Loss 0.955473078786775 0 0.7425561 0 prediction 0.91094615757355 Functional Loss - CDV3 ENSG00000091527 CDS Human protein_coding chr3:133302927 chr3:133302927 synonymous SNV . 0 21 hPsi_associated_SNPs_2232 0 0 1 0 2 Ribosome 0.438718606354002 0 0.4851122 0 hPsi_site_273 iPseU_CNN:0.4851122;iRNA_PseU:0 274 chr15 76222269 76222269 1 + T C STAD 76222269 + 76222249 76222289 41 GTGTGGTCCTTGTCTTTGGTTATAATTGCTGTAAGGTGGGA GTGTGGTCCTTGTCTTTGGTCATAATTGCTGTAAGGTGGGA Direct Loss 0.955430066083839 0 0.2780531 0 prediction 0.910860132167678 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76222269 chr15:76222269 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_2233 0 0 1 0 1 Cytosol 0.438726873533593 0 0 0 hPsi_site_274 iPseU_CNN:0;iRNA_PseU:0 275 chr7 4830888 4830888 1 + T C STAD 4830888 + 4830868 4830908 41 AGATGCCTAGCGTGGCCCAGTTTGTGCTCACACCCAGCACG AGATGCCTAGCGTGGCCCAGCTTGTGCTCACACCCAGCACG Direct Loss 0.955256901276948 0 0.7431109 0 prediction 0.910513802553895 Functional Loss - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830888 chr7:4830888 nonsynonymous SNV 0.947 1 21 hPsi_associated_SNPs_2234 0 0 1 0 0 chromatin 0.438675605305931 0 0.4862218 0 hPsi_site_275 iPseU_CNN:0.4862218;iRNA_PseU:0 276 chr2 74441226 74441226 1 + T C PRAD 74441226 + 74441206 74441246 41 GAGTCAGACAAAAAGCTGGGTATATCACTCCAGTTCCTGGA GAGTCAGACAAAAAGCTGGGCATATCACTCCAGTTCCTGGA Direct Loss 0.955251857386512 0 0.5888582 0 prediction 0.910503714773023 Functional Loss - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74441226 chr2:74441226 nonsynonymous SNV 0.911 1 21 hPsi_associated_SNPs_2235 0 0 1 0 1 Ribosome 0.439084968811258 0 0.1777164 0 hPsi_site_276 iPseU_CNN:0.1777164;iRNA_PseU:0 277 chr19 54634798 54634798 1 + T C SKCM 54634798 + 54634778 54634818 41 TGGCTGAGGCCAACCAGAAGTATTTCTCCAGCATGGCTGAG TGGCTGAGGCCAACCAGAAGCATTTCTCCAGCATGGCTGAG Direct Loss 0.955069054983339 0 0.4178893 0 prediction 0.910138109966679 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54634798 chr19:54634798 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2236 0 0 1 1 1 Cytosol 0.435683877053915 0 0 0 hPsi_site_277 iPseU_CNN:0;iRNA_PseU:0 278 chr14 24600969 24600969 1 + T G LAML 24600969 + 24600949 24600989 41 GCTGGCAGCAGTGGTCATCTTTGGGCCGCTTCTGCAGTTCC GCTGGCAGCAGTGGTCATCTGTGGGCCGCTTCTGCAGTTCC Direct Loss 0.955058937351632 0 0.46700177 0 prediction 0.910117874703264 Functional Loss - FITM1 ENSG00000139914;ENSG00000259371 CDS Human other chr14:24600969 chr14:24600969 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2237 0 0 0 0 1 insoluble cytoplasm 0.438668519679887 0 0 0 hPsi_site_278 iPseU_CNN:0;iRNA_PseU:0 279 chr12 81102353 81102353 1 + T C COAD 81102353 + 81102333 81102373 41 AGCTCCCAGTGGCCAAGTGTTTCCGATCATTCCAGGGGGCT AGCTCCCAGTGGCCAAGTGTCTCCGATCATTCCAGGGGGCT Direct Loss 0.955051569184843 0 0.6947203 0 prediction 0.910103138369686 Functional Loss - MYF6 ENSG00000111046 CDS Human protein_coding chr12:81102353 chr12:81102353 synonymous SNV . 0 21 hPsi_associated_SNPs_2238 0 0 0 0 2 unknown 0.438718641565238 0 0.3894406 0 hPsi_site_279 iPseU_CNN:0.3894406;iRNA_PseU:0 280 chr1 45270100 45270100 1 + T C PRAD 45270100 + 45270080 45270120 41 CCAATAAGTTCGGCTTTGGGTATCAACTGTCCAGCCGCCGT CCAATAAGTTCGGCTTTGGGCATCAACTGTCCAGCCGCCGT Direct Loss 0.954893964819093 0 0.5447745 0 prediction 0.909787929638186 Functional Loss - PLK3 ENSG00000173846 CDS Human protein_coding chr1:45270100 chr1:45270100 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2239 0 0 1 0 2 Cytosol 0.438632485729263 0 0.0895490000000001 0 hPsi_site_280 iPseU_CNN:0.0895490000000001;iRNA_PseU:0 281 chr2 73477477 73477477 1 + T C LUSC 73477477 + 73477457 73477497 41 CCAAGGCCAAGACATGCACCTTCATTCTCCGTGGCGGCGCC CCAAGGCCAAGACATGCACCCTCATTCTCCGTGGCGGCGCC Direct Loss 0.954885102391523 0 0.26778185 0 prediction 0.909770204783045 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477477 chr2:73477477 nonsynonymous SNV 0.979 1 21 hPsi_associated_SNPs_2240 0 0 1 0 2 Cytosol 0.440469386795749 0 0 0 hPsi_site_281 iPseU_CNN:0;iRNA_PseU:0 282 chr15 45406895 45406895 1 + T G LGG 45406895 + 45406875 45406915 41 GCTCATCGTTATTCTAGTGTTTTTGGCTCTAGCAGCAAGCT GCTCATCGTTATTCTAGTGTGTTTGGCTCTAGCAGCAAGCT Direct Loss 0.954782212770746 0 0.6880719 0 prediction 0.909564425541493 Functional Loss - DUOXA2 ENSG00000140274 CDS Human protein_coding chr15:45406895 chr15:45406895 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_2241 0 0 0 0 1 unknown 0.436223226966525 0 0.3761438 0 hPsi_site_282 iPseU_CNN:0.3761438;iRNA_PseU:0 283 chr11 4928674 4928674 1 + T G STAD 4928674 + 4928654 4928694 41 GGACTGGAACATGCCCACATTTGGTTCTCCATCCCCATTTG GGACTGGAACATGCCCACATGTGGTTCTCCATCCCCATTTG Direct Loss 0.954744343214447 0 0.34403294 0 prediction 0.909488686428894 Functional Loss - OR51A7 ENSG00000176895 CDS Human protein_coding chr11:4928674 chr11:4928674 nonsynonymous SNV 0.930 0 21 hPsi_associated_SNPs_2242 0 0 0 0 0 exosome 0.438730895111697 0 0 0 hPsi_site_283 iPseU_CNN:0;iRNA_PseU:0 284 chr17 71228388 71228388 1 + A T SKCM 71228388 - 71228368 71228408 41 GTACGGGTCCGACTGAGGGGTACTCGCCACCGGCTGCGTCC GTACGGGTCCGACTGAGGGGAACTCGCCACCGGCTGCGTCC Direct Loss 0.954682855489438 0 0.8648328 0 prediction 0.909365710978875 Functional Loss - FAM104A ENSG00000133193 CDS Human protein_coding chr17:71228388 chr17:71228388 nonsynonymous SNV 0.945 0 21 hPsi_associated_SNPs_2243 0 0 1 0 0 Ribosome 0.43874058218263 0 0.7296656 0 hPsi_site_284 iPseU_CNN:0.7296656;iRNA_PseU:0 285 chr17 40947899 40947899 1 + A G SKCM 40947899 - 40947879 40947919 41 GGGCTGCCCCCAACTTGGGGTTCCTTCCCATCATCTCCTTC GGGCTGCCCCCAACTTGGGGCTCCTTCCCATCATCTCCTTC Direct Loss 0.954682270938858 0 0.67227924 0 prediction 0.909364541877716 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947899 chr17:40947899 synonymous SNV . 0 21 hPsi_associated_SNPs_2244 0 0 0 0 0 chromatin 0.438717915546954 0 0.34455848 0 hPsi_site_285 iPseU_CNN:0.34455848;iRNA_PseU:0 286 chr1 149871663 149871663 1 + T G UCEC 149871663 + 149871643 149871683 41 GTCTCCATGGCTGGCCGCGTTTGTTTGTGCCAGGGCAGCGC GTCTCCATGGCTGGCCGCGTGTGTTTGTGCCAGGGCAGCGC Direct Loss 0.954669849190572 0 0.37487292 0 prediction 0.909339698381144 Functional Loss - BOLA1 ENSG00000178096 CDS Human protein_coding chr1:149871663 chr1:149871663 synonymous SNV . 0 21 hPsi_associated_SNPs_2245 0 0 1 0 0 Ribosome 0.438718593051101 0 0 0 hPsi_site_286 iPseU_CNN:0;iRNA_PseU:0 287 chr16 732411 732411 1 + A C GBM 732411 - 732391 732431 41 GCCAAGTTGGGGATGAGCTGTTCCTGGGTCAGGGGGCTCCG GCCAAGTTGGGGATGAGCTGGTCCTGGGTCAGGGGGCTCCG Direct Loss 0.95466548488779 0 0.37573949 0 prediction 0.90933096977558 Functional Loss - STUB1 ENSG00000103266 CDS Human protein_coding chr16:732411 chr16:732411 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_2246 0 0 1 1 0 Endoplasmic reticulum 0.438718382835281 0 0 0 hPsi_site_287 iPseU_CNN:0;iRNA_PseU:0 288 chr4 184432022 184432022 1 + T C UCEC 184432022 + 184432002 184432042 41 ATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGCAGGGGA ATAAACCAAAGGGGAAATGGCATTGCCCAAAGTGCAGGGGA Direct Loss 0.954638196551178 0 0.57113564 0 prediction 0.909276393102355 Functional Loss - ING2 ENSG00000168556 CDS Human protein_coding chr4:184432022 chr4:184432022 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2247 0 0 1 0 0 chromatin 0.438718592995122 0 0.14227128 0 hPsi_site_288 iPseU_CNN:0.14227128;iRNA_PseU:0 289 chr11 44100322 44100322 1 + T C UCEC 44100322 + 44100302 44100342 41 AGAGCTACAGGAGTACCTGGTATTTGCCAAGAGGTGAGGCA AGAGCTACAGGAGTACCTGGCATTTGCCAAGAGGTGAGGCA Direct Loss 0.954637401723636 0 0.7033492 0 prediction 0.909274803447272 Functional Loss - ACCS ENSG00000110455 CDS Human protein_coding chr11:44100322 chr11:44100322 nonsynonymous SNV 0.443 0 21 hPsi_associated_SNPs_2248 0 0 0 1 2 chromatin 0.438607164265739 0 0.4066984 0 hPsi_site_289 iPseU_CNN:0.4066984;iRNA_PseU:0 290 chr2 27500686 27500686 1 + T C LUSC 27500686 + 27500666 27500706 41 GTAGGAAACTGGCCTTGCGGTATCATCCCGACAAGAATCCA GTAGGAAACTGGCCTTGCGGCATCATCCCGACAAGAATCCA Direct Loss 0.954620042625025 0 0.62416404 0 prediction 0.90924008525005 Functional Loss - DNAJC5G ENSG00000163793 CDS Human protein_coding chr2:27500686 chr2:27500686 nonsynonymous SNV 0.985 0 21 hPsi_associated_SNPs_2249 0 0 0 0 1 exosome 0.438744082839785 0 0.24832808 0 hPsi_site_290 iPseU_CNN:0.24832808;iRNA_PseU:0 291 chr11 5602557 5602557 1 + T A LUSC 5602557 + 5602537 5602577 41 CCATCTGCTCCCCCCTGCGATATGTCACAATCCTCACAAGC CCATCTGCTCCCCCCTGCGAAATGTCACAATCCTCACAAGC Direct Loss 0.954611846616172 0 0.66083264 0 prediction 0.909223693232344 Functional Loss - OR52B6 ENSG00000187747 CDS Human protein_coding chr11:5602557 chr11:5602557 nonsynonymous SNV 0.003 3 21 hPsi_associated_SNPs_2250 0 0 0 0 0 unknown 0.43871859299472 0 0.32166528 0 hPsi_site_291 iPseU_CNN:0.32166528;iRNA_PseU:0 292 chr19 17396349 17396349 1 + T C rs187099869 17396349 + 17396329 17396369 41 AAGGGACGAGGGCCCGGCCATATGTCCACCTCTGGGAGGCC AAGGGACGAGGGCCCGGCCACATGTCCACCTCTGGGAGGCC Direct Loss 0.954595955757281 0 0.5199626 0 prediction 0.909191911514563 Functional Loss - ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17396349 chr19:17396349 nonsynonymous SNV 0.059 1 21 hPsi_associated_SNPs_2251 0 0 0 0 1 chromatin 0.438718219985035 0 0.0399252000000001 0 hPsi_site_292 iPseU_CNN:0.0399252000000001;iRNA_PseU:0 Multiple complex diseases 293 chr5 139060297 139060297 1 + T C LUAD 139060297 + 139060277 139060317 41 GAGCGTCGGAACAAGAGCGGTATCATCAGTGAGCCCCTCAA GAGCGTCGGAACAAGAGCGGCATCATCAGTGAGCCCCTCAA Direct Loss 0.95459442782014 0 0.647941 0 prediction 0.909188855640281 Functional Loss - CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060297 chr5:139060297 synonymous SNV . 0 21 hPsi_associated_SNPs_2252 0 0 1 0 0 Ribosome 0.438718791591085 0 0.295882 0 hPsi_site_293 iPseU_CNN:0.295882;iRNA_PseU:0 294 chr3 158538056 158538056 1 + T C rs4680469 158538056 + 158538036 158538076 41 TTCTCCTTACCCCTGTGGCTTATATTTATCATCTGTGTCTG TTCTCCTTACCCCTGTGGCTCATATTTATCATCTGTGTCTG Direct Loss 0.954581296684713 0 0.34160513 0 prediction 0.909162593369427 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158538056 chr3:158538056 synonymous SNV . 0 21 hPsi_associated_SNPs_2253 0 0 0 1 2 Ribosome 0.438718593082311 0 0 0 hPsi_site_294 iPseU_CNN:0;iRNA_PseU:0 295 chr4 25677805 25677805 1 + T C HNSC 25677805 + 25677785 25677825 41 TCTCCGGCATCTTGCTGTGGTACCCGATCCCGTTCACTCGC TCTCCGGCATCTTGCTGTGGCACCCGATCCCGTTCACTCGC Direct Loss 0.954531108806022 0 0.60598916 0 prediction 0.909062217612045 Functional Loss - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25677805 chr4:25677805 nonsynonymous SNV 0.969 5 21 hPsi_associated_SNPs_2254 0 0 0 0 1 nucleus 0.437158416988198 0 0.21197832 0 hPsi_site_295 iPseU_CNN:0.21197832;iRNA_PseU:0 296 chr1 47157548 47157548 1 + T G BLCA 47157548 + 47157528 47157568 41 TCTTGTGTTCATCCACAGTTTTCTGTAGTGCTTCCACAGCA TCTTGTGTTCATCCACAGTTGTCTGTAGTGCTTCCACAGCA Direct Loss 0.95441382873576 0 0.5393121 0 prediction 0.90882765747152 Functional Loss - EFCAB14 ENSG00000159658 CDS Human protein_coding chr1:47157548 chr1:47157548 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_2255 0 0 0 0 1 Endoplasmic reticulum 0.438196948345647 0 0.0786241999999999 0 hPsi_site_296 iPseU_CNN:0.0786241999999999;iRNA_PseU:0 297 chr12 56515604 56515604 1 + T C BLCA 56515604 + 56515584 56515624 41 CCACCACTCCCATGGTGACTTACCCTATCGCTTCCCAGAGC CCACCACTCCCATGGTGACTCACCCTATCGCTTCCCAGAGC Direct Loss 0.954407689696977 0 0.37623265 0 prediction 0.908815379393954 Functional Loss - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515604 chr12:56515604 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2256 0 0 0 0 0 Ribosome 0.438771694682035 0 0 0 hPsi_site_297 iPseU_CNN:0;iRNA_PseU:0 298 chr12 49373287 49373287 1 + T G UCEC 49373287 + 49373267 49373307 41 GCCTCCTCCACGAACCTGCTTACAGACTCCAAGAGTCTGCA GCCTCCTCCACGAACCTGCTGACAGACTCCAAGAGTCTGCA Direct Loss 0.954384954765306 0 0.7001438 0 prediction 0.908769909530612 Functional Loss - WNT1 ENSG00000125084 CDS Human protein_coding chr12:49373287 chr12:49373287 synonymous SNV . 0 21 hPsi_associated_SNPs_2257 0 0 0 0 1 exosome 0.438711146409488 0 0.4002876 0 hPsi_site_298 iPseU_CNN:0.4002876;iRNA_PseU:0 299 chr22 24236679 24236679 1 + A T ACC 24236679 - 24236659 24236699 41 GCGCGGGGCACGTTGGTGTTTACGATGAACATCGGCATGAT GCGCGGGGCACGTTGGTGTTAACGATGAACATCGGCATGAT Direct Loss 0.954325986404533 0 0.6411693 0 prediction 0.908651972809067 Functional Loss - MIF ENSG00000240972 CDS Human protein_coding chr22:24236679 chr22:24236679 synonymous SNV . 0 21 hPsi_associated_SNPs_2258 0 0 0 5 0 Ribosome 0.438718593439424 0 0.2823386 0 hPsi_site_299 iPseU_CNN:0.2823386;iRNA_PseU:0 300 chr1 203274789 203274789 1 + T C LIHC 203274789 + 203274769 203274809 41 AGATCGCCGCCGCCGTGGGCTTCCTCTCCAGCCTCCTGAGG AGATCGCCGCCGCCGTGGGCCTCCTCTCCAGCCTCCTGAGG Direct Loss 0.9542594314138 0 0.84385383 0 prediction 0.9085188628276 Functional Loss - BTG2 ENSG00000159388 CDS Human protein_coding chr1:203274789 chr1:203274789 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2259 0 0 1 1 1 exosome 0.438718569782831 0 0.68770766 0 hPsi_site_300 iPseU_CNN:0.68770766;iRNA_PseU:0 301 chr19 41313744 41313744 1 + T C COAD 41313744 + 41313724 41313764 41 GAAAGGTGTCCAAGTACCTGTATCACAGCCGCCTACGCCCA GAAAGGTGTCCAAGTACCTGCATCACAGCCGCCTACGCCCA Direct Loss 0.954173122292384 0 0.69095784 0 prediction 0.908346244584767 Functional Loss - EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41313744 chr19:41313744 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2260 0 0 1 0 1 chromatin 0.4387185608933 0 0.38191568 0 hPsi_site_301 iPseU_CNN:0.38191568;iRNA_PseU:0 302 chr2 39008932 39008932 1 + T G KIRC 39008932 + 39008912 39008952 41 TGTGTGGCTGGGGTCCTGACTATAGACCCACCATATGGTCC TGTGTGGCTGGGGTCCTGACGATAGACCCACCATATGGTCC Direct Loss 0.954146524639187 0 0.6682673 0 prediction 0.908293049278375 Functional Loss - GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008932 chr2:39008932 synonymous SNV . 0 21 hPsi_associated_SNPs_2261 0 0 1 0 0 Ribosome 0.438843874225459 0 0.3365346 0 hPsi_site_302 iPseU_CNN:0.3365346;iRNA_PseU:0 303 chrX 31196878 31196878 1 + T G UCEC 31196878 + 31196858 31196898 41 CTTTTGGTTCGAAATTTGTTTTTTAGTACCTTGGCAAAGTC CTTTTGGTTCGAAATTTGTTGTTTAGTACCTTGGCAAAGTC Direct Loss 0.954071389703852 0 0.4286701 0 prediction 0.908142779407703 Functional Loss - DMD ENSG00000198947 CDS Human protein_coding chrX:31196878 chrX:31196878 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2262 0 0 0 0 0 chromatin 0.435127450264893 0 0 0 hPsi_site_303 iPseU_CNN:0;iRNA_PseU:0 304 chr16 3350078 3350078 1 + T C rs74941918 3350078 + 3350058 3350098 41 GACTTCCAAAAGAGGTCTGTTTCATCCCCACTGTATAGCTG GACTTCCAAAAGAGGTCTGTCTCATCCCCACTGTATAGCTG Direct Loss 0.954066060825143 0 0.6339211 0 prediction 0.908132121650287 Functional Loss - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3350078 chr16:3350078 synonymous SNV . 0 21 hPsi_associated_SNPs_2263 0 0 0 1 0 exosome 0.4387188616691 0 0.2678422 0 hPsi_site_304 iPseU_CNN:0.2678422;iRNA_PseU:0 305 chr3 142840160 142840160 1 + T C UCEC 142840160 + 142840140 142840180 41 GGGACAAGCGGCAGCTGGTGTACGTGTTCACCACGTGGCGC GGGACAAGCGGCAGCTGGTGCACGTGTTCACCACGTGGCGC Direct Loss 0.954052209182373 0 0.8439727 0 prediction 0.908104418364745 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840160 chr3:142840160 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2264 0 0 0 0 0 cytosol 0.439014778220729 0 0.6879454 0 hPsi_site_305 iPseU_CNN:0.6879454;iRNA_PseU:0 306 chr11 71276888 71276888 1 + T C LIHC 71276888 + 71276868 71276908 41 GGCTCCAAAGGGGGCTGTGGTTCCTGTGGGGGCTCCAAGGG GGCTCCAAAGGGGGCTGTGGCTCCTGTGGGGGCTCCAAGGG Direct Loss 0.953993103501558 0 0.29357356 0 prediction 0.907986207003116 Functional Loss - KRTAP5-10 ENSG00000204572 CDS Human protein_coding chr11:71276888 chr11:71276888 synonymous SNV . 0 21 hPsi_associated_SNPs_2265 0 0 0 0 0 unknown 0.438718574360061 0 0 0 hPsi_site_306 iPseU_CNN:0;iRNA_PseU:0 307 chr19 8841963 8841963 1 + T C rs890848 8841963 + 8841943 8841983 41 CTGAAGCTCTCCTGTGCAGATACCTGTGCCTACGAGATGGC CTGAAGCTCTCCTGTGCAGACACCTGTGCCTACGAGATGGC Direct Loss 0.953941166647447 0 0.68184537 0 prediction 0.907882333294895 Functional Loss - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8841963 chr19:8841963 synonymous SNV . 0 21 hPsi_associated_SNPs_2266 0 0 0 0 0 unknown 0.444488075509187 0 0.36369074 0 hPsi_site_307 iPseU_CNN:0.36369074;iRNA_PseU:0 308 chr16 3170041 3170041 1 + T C COAD 3170041 + 3170021 3170061 41 GGCAAGTGCTTCAGCCAGCGTTCCAACCTCATCGCGCACAA GGCAAGTGCTTCAGCCAGCGCTCCAACCTCATCGCGCACAA Direct Loss 0.953927630152233 0 0.70456594 0 prediction 0.907855260304465 Functional Loss - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3170041 chr16:3170041 synonymous SNV . 0 21 hPsi_associated_SNPs_2267 0 0 1 0 0 chromatin 0.440853333761608 0 0.40913188 0 hPsi_site_308 iPseU_CNN:0.40913188;iRNA_PseU:0 309 chr3 51981791 51981791 1 + T A LUSC 51981791 + 51981771 51981811 41 GTGGGGCCCACCATGTCGGCTACATGTTCCTGGGTGAGGTG GTGGGGCCCACCATGTCGGCAACATGTTCCTGGGTGAGGTG Direct Loss 0.953848213541589 0 0.5236546 0 prediction 0.907696427083178 Functional Loss - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51981791 chr3:51981791 nonsynonymous SNV 0.965 3 21 hPsi_associated_SNPs_2268 0 0 0 0 1 nucleus 0.438671891473358 0 0.0473091999999999 0 hPsi_site_309 iPseU_CNN:0.0473091999999999;iRNA_PseU:0 310 chr16 29821464 29821464 1 + T C LUAD 29821464 + 29821444 29821484 41 AGCGGCAGCAGCGGCAGCAGTAGCAGCCCCTCCCACAGCTG AGCGGCAGCAGCGGCAGCAGCAGCAGCCCCTCCCACAGCTG Direct Loss 0.95384350555212 0 0.40220106 0 prediction 0.907687011104241 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29821464 chr16:29821464 nonsynonymous SNV 0.971 2 21 hPsi_associated_SNPs_2269 0 0 1 0 1 Cytosol 0.438768534365461 0 0 0 hPsi_site_310 iPseU_CNN:0;iRNA_PseU:0 311 chr19 36145535 36145535 1 + T C COAD 36145535 + 36145515 36145555 41 ATATCTCTGTGTGCGAATGGTACCAGCGTGTGTACCAGTCC ATATCTCTGTGTGCGAATGGCACCAGCGTGTGTACCAGTCC Direct Loss 0.953823439461949 0 0.94894755 0 prediction 0.907646878923899 Functional Loss - COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36145535 chr19:36145535 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2270 0 0 1 0 2 Ribosome 0.440765450526327 0 0.8978951 0 hPsi_site_311 iPseU_CNN:0.8978951;iRNA_PseU:0 312 chr12 117014042 117014042 1 + T C UCEC 117014042 + 117014022 117014062 41 CCACACCAATCTCAGAGGTGTATGAGAGTGAGAAAGATGAA CCACACCAATCTCAGAGGTGCATGAGAGTGAGAAAGATGAA Direct Loss 0.953650271707679 0 0.41644648 0 prediction 0.907300543415358 Functional Loss - MAP1LC3B2 ENSG00000171471 CDS Human other chr12:117014042 chr12:117014042 nonsynonymous SNV 0.037 3 21 hPsi_associated_SNPs_2271 0 0 0 0 0 Ribosome 0.438618253324944 0 0 0 hPsi_site_312 iPseU_CNN:0;iRNA_PseU:0 313 chr1 206230904 206230904 1 + T C LUSC 206230904 + 206230884 206230924 41 GGGCTTCAACAGCCACCTGTTACCGCGGCCCCTGCGTCACC GGGCTTCAACAGCCACCTGTCACCGCGGCCCCTGCGTCACC Direct Loss 0.953612697426761 0 0.77396846 0 prediction 0.907225394853523 Functional Loss - AVPR1B ENSG00000198049 CDS Human protein_coding chr1:206230904 chr1:206230904 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2272 0 0 0 0 1 unknown 0.438664285783704 0 0.54793692 0 hPsi_site_313 iPseU_CNN:0.54793692;iRNA_PseU:0 314 chr14 105995577 105995577 1 + T C UCEC 105995577 + 105995557 105995597 41 TGGCGCTGGACCGCATGGAGTACGTGCGCACCTTCCGCAAG TGGCGCTGGACCGCATGGAGCACGTGCGCACCTTCCGCAAG Direct Loss 0.953589247585587 0 0.8676494 0 prediction 0.907178495171174 Functional Loss - TMEM121 ENSG00000184986 CDS Human protein_coding chr14:105995577 chr14:105995577 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2273 0 0 1 0 0 exosome 0.438528075085026 0 0.7352988 0 hPsi_site_314 iPseU_CNN:0.7352988;iRNA_PseU:0 315 chr15 80037002 80037002 1 + T G rs138601653 80037002 + 80036982 80037022 41 CCTCTAACAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCA CCTCTAACAGTTGAAGGGGGGATAGCTCAGTGGGTAGAGCA Direct Loss 0.953516444080505 0 0.555917 0 prediction 0.907032888161011 Functional Loss - KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037002 chr15:80037002 . . 0 21 hPsi_associated_SNPs_2274 0 0 1 0 0 unknown 0.43871859299533 0 0.111834 0 hPsi_site_315 iPseU_CNN:0.111834;iRNA_PseU:0 316 chr3 98251090 98251090 1 + T G UCEC 98251090 + 98251070 98251110 41 CGAAGACTGATCGACATCTTTATCATCAATCTGGCTGCCTC CGAAGACTGATCGACATCTTGATCATCAATCTGGCTGCCTC Direct Loss 0.953456091331497 0 0.5735673 0 prediction 0.906912182662994 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251090 chr3:98251090 nonsynonymous SNV 0.893 4 21 hPsi_associated_SNPs_2275 0 0 0 0 0 exosome 0.43807490981279 0 0.1471346 0 hPsi_site_316 iPseU_CNN:0.1471346;iRNA_PseU:0 317 chr15 45710816 45710816 1 + T C UCEC 45710816 + 45710796 45710836 41 AATAGGGCCTGATGTCTCCTTAGAAAACCTCGCAGCAGAAA AATAGGGCCTGATGTCTCCTCAGAAAACCTCGCAGCAGAAA Direct Loss 0.953425414067843 0 0.8072189 0 prediction 0.906850828135685 Functional Loss - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45710816 chr15:45710816 nonsynonymous SNV 0.993 3 21 hPsi_associated_SNPs_2276 0 0 1 0 2 chromatin 0.438721653483722 0 0.6144378 0 hPsi_site_317 iPseU_CNN:0.6144378;iRNA_PseU:0 318 chr10 43883130 43883130 1 + T G LUAD 43883130 + 43883110 43883150 41 TGTCTTTTTTCAGGGCCATTTTTACATCATCTTCTGATCCA TGTCTTTTTTCAGGGCCATTGTTACATCATCTTCTGATCCA Direct Loss 0.953231700986581 0 0.42637473 0 prediction 0.906463401973161 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43883130 chr10:43883130 nonsynonymous SNV 0.993 1 21 hPsi_associated_SNPs_2277 0 0 0 0 0 Cytosol 0.438720967833284 0 0 0 hPsi_site_318 iPseU_CNN:0;iRNA_PseU:0 319 chr21 45548185 45548185 1 + T C LUSC 45548185 + 45548165 45548205 41 GGAGAAAGTGCTGGAGTTTTTAGCTTCCTCCTTTGAAGTGT GGAGAAAGTGCTGGAGTTTTCAGCTTCCTCCTTTGAAGTGT Direct Loss 0.953192182603212 0 0.46211177 0 prediction 0.906384365206424 Functional Loss - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45548185 chr21:45548185 nonsynonymous SNV 0.938 4 21 hPsi_associated_SNPs_2278 0 0 1 0 2 Nucleus 0.438718592122696 0 0 0 hPsi_site_319 iPseU_CNN:0;iRNA_PseU:0 320 chr7 134849279 134849279 1 + T C PAAD 134849279 + 134849259 134849299 41 TGTGGTCATCTGCCTGATGTTTTACGCTCTTCTCTGGGAGG TGTGGTCATCTGCCTGATGTCTTACGCTCTTCTCTGGGAGG Direct Loss 0.953064039228632 0 0.6800773 0 prediction 0.906128078457263 Functional Loss - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849279 chr7:134849279 nonsynonymous SNV 0.956 0 21 hPsi_associated_SNPs_2279 0 0 0 0 0 chromatin 0.438727565606877 0 0.3601546 0 hPsi_site_320 iPseU_CNN:0.3601546;iRNA_PseU:0 321 chr17 7345961 7345961 1 + T C UCEC 7345961 + 7345941 7345981 41 AGGAGTGTGTCTTTGAGAATTACTACGTCCTGTACGCCTCT AGGAGTGTGTCTTTGAGAATCACTACGTCCTGTACGCCTCT Direct Loss 0.953053546824191 0 0.5519845 0 prediction 0.906107093648382 Functional Loss - FGF11 ENSG00000161958 CDS Human protein_coding chr17:7345961 chr17:7345961 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2280 0 0 1 0 1 exosome 0.436711186128002 0 0.103969 0 hPsi_site_321 iPseU_CNN:0.103969;iRNA_PseU:0 322 chr1 27121130 27121130 1 + T C UCEC 27121130 + 27121110 27121150 41 CTTTGCCTTTGCCACTGGGGTACGCTCCAACGGGCTGGTCA CTTTGCCTTTGCCACTGGGGCACGCTCCAACGGGCTGGTCA Direct Loss 0.953025271371907 0 0.893738 0 prediction 0.906050542743813 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27121130 chr1:27121130 nonsynonymous SNV 0.640 1 21 hPsi_associated_SNPs_2281 0 0 1 0 0 Endoplasmic reticulum 0.438718611149591 0 0.787476 0 hPsi_site_322 iPseU_CNN:0.787476;iRNA_PseU:0 323 chr20 43378792 43378792 1 + T C HNSC 43378792 + 43378772 43378812 41 TACGGCCACGCCGCGCCGGGTACGGACTCCGGCAAGGTCTT TACGGCCACGCCGCGCCGGGCACGGACTCCGGCAAGGTCTT Direct Loss 0.953009702187149 0 0.8361093 0 prediction 0.906019404374298 Functional Loss - KCNK15 ENSG00000124249 CDS Human protein_coding chr20:43378792 chr20:43378792 synonymous SNV . 0 21 hPsi_associated_SNPs_2282 0 0 0 0 0 Nucleus 0.438718733445395 0 0.6722186 0 hPsi_site_323 iPseU_CNN:0.6722186;iRNA_PseU:0 324 chr4 4864611 4864611 1 + T A UCEC 4864611 + 4864591 4864631 41 CACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCG CACTGAGACGCAGGTGAAGAAATGGTTCCAGAACCGCCGCG Direct Loss 0.95300303931636 0 0.53384095 0 prediction 0.90600607863272 Functional Loss - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864611 chr4:4864611 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_2283 0 0 0 0 0 Cytosol 0.438718592784066 0 0.0676819 0 hPsi_site_324 iPseU_CNN:0.0676819;iRNA_PseU:0 325 chr1 248308878 248308878 1 + T A LUAD 248308878 + 248308858 248308898 41 AGACCCAAAATTTGTGGACTTATGACTGCCTTCTCCTGGAT AGACCCAAAATTTGTGGACTAATGACTGCCTTCTCCTGGAT Direct Loss 0.952901601925519 0 0.32407933 0 prediction 0.905803203851038 Functional Loss - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248308878 chr1:248308878 synonymous SNV . 0 21 hPsi_associated_SNPs_2284 0 0 0 0 0 unknown 0.438706389653393 0 0 0 hPsi_site_325 iPseU_CNN:0;iRNA_PseU:0 326 chr1 16356533 16356533 1 + T C rs35154011 16356533 + 16356513 16356553 41 GGCATTGTGACTGGAGGGGTTACCAATCCCATCATGCCCGG GGCATTGTGACTGGAGGGGTCACCAATCCCATCATGCCCGG Direct Loss 0.952890444777124 0 0.5519684 0 prediction 0.905780889554248 Functional Loss - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16356533 chr1:16356533 synonymous SNV . 0 21 hPsi_associated_SNPs_2285 0 0 0 0 2 Endoplasmic reticulum 0.436615337243981 0 0.1039368 0 hPsi_site_326 iPseU_CNN:0.1039368;iRNA_PseU:0 327 chr5 102522092 102522092 1 + T A SKCM 102522092 + 102522072 102522112 41 GCGCACCTAACCTACAGGATTATGCTCGTACTCATCGTAAA GCGCACCTAACCTACAGGATAATGCTCGTACTCATCGTAAA Direct Loss 0.952871958728981 0 0.8891262 0 prediction 0.905743917457963 Functional Loss - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102522092 chr5:102522092 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2286 0 0 1 0 1 Cytosol 0.438748128071615 0 0.7782524 0 hPsi_site_327 iPseU_CNN:0.7782524;iRNA_PseU:0 328 chr20 61299472 61299472 1 + T A COAD 61299472 + 61299452 61299492 41 GAAAGCCCCTCCTTCTGGTTTTCATATTCGTTGTAATTTTC GAAAGCCCCTCCTTCTGGTTATCATATTCGTTGTAATTTTC Direct Loss 0.952860084824972 0 0.54798186 0 prediction 0.905720169649944 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61299472 chr20:61299472 nonsynonymous SNV 0.962 0 21 hPsi_associated_SNPs_2287 0 0 1 0 1 Endoplasmic reticulum 0.438718592992774 0 0.0959637200000001 0 hPsi_site_328 iPseU_CNN:0.0959637200000001;iRNA_PseU:0 329 chr2 46808672 46808672 1 + A G GBM 46808672 - 46808652 46808692 41 CTACGTGGCTGGCCTTGTTATTTCACCACTCTGGATATACT CTACGTGGCTGGCCTTGTTACTTCACCACTCTGGATATACT Direct Loss 0.952852638529865 0 0.38532487 0 prediction 0.90570527705973 Functional Loss - PIGF ENSG00000151665 CDS Human protein_coding chr2:46808672 chr2:46808672 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2288 0 0 1 2 1 Ribosome 0.438718608059375 0 0 0 hPsi_site_329 iPseU_CNN:0;iRNA_PseU:0 330 chr12 6961381 6961381 1 + T C UCEC 6961381 + 6961361 6961401 41 GGAGGCGCTGCTGTCAGTATTACCGACGATCCGGGTCCCTA GGAGGCGCTGCTGTCAGTATCACCGACGATCCGGGTCCCTA Direct Loss 0.952812070084915 0 0.70395947 0 prediction 0.90562414016983 Functional Loss - USP5 ENSG00000111667 CDS Human protein_coding chr12:6961381 chr12:6961381 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2289 0 0 1 0 1 Nucleus 0.438302154665123 0 0.40791894 0 hPsi_site_330 iPseU_CNN:0.40791894;iRNA_PseU:0 331 chrX 139866475 139866475 1 + T C UCEC 139866475 + 139866455 139866495 41 GGTACGTCTTCCAACAAAGGTATGTCTTCCAACAAAGGTAC GGTACGTCTTCCAACAAAGGCATGTCTTCCAACAAAGGTAC Direct Loss 0.952753890925462 0 0.48971495 0 prediction 0.905507781850925 Functional Loss - CDR1 ENSG00000184258 CDS Human protein_coding chrX:139866475 chrX:139866475 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_2290 0 0 1 0 0 exosome 0.438718575261986 0 0 0 hPsi_site_331 iPseU_CNN:0;iRNA_PseU:0 332 chr1 46080804 46080804 1 + T C BLCA 46080804 + 46080784 46080824 41 AGCTGGGCTTGGCTTATGGGTACAACTCTCAGTATGATGAG AGCTGGGCTTGGCTTATGGGCACAACTCTCAGTATGATGAG Direct Loss 0.952690407200744 0 0.9684071 0 prediction 0.905380814401489 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46080804 chr1:46080804 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_2291 0 0 1 0 1 Nucleus 0.438717786869314 0 0.9368142 0 hPsi_site_332 iPseU_CNN:0.9368142;iRNA_PseU:0 333 chr9 72520987 72520987 1 + T C UCEC 72520987 + 72520967 72521007 41 GGCATGATGAGAGTGGGATTTATGCTAATTCAGATGTAAAA GGCATGATGAGAGTGGGATTCATGCTAATTCAGATGTAAAA Direct Loss 0.952669942458956 0 0.46182448 0 prediction 0.905339884917913 Functional Loss - C9orf135 ENSG00000204711 CDS Human protein_coding chr9:72520987 chr9:72520987 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2292 0 0 0 0 0 nucleoplasm 0.43871163690022 0 0 0 hPsi_site_333 iPseU_CNN:0;iRNA_PseU:0 334 chr7 143827032 143827032 1 + T G UCEC 143827032 + 143827012 143827052 41 GCAGAAAGTTCTTTCCCTGTTTTACAGCCTTTTCAATCCAA GCAGAAAGTTCTTTCCCTGTGTTACAGCCTTTTCAATCCAA Direct Loss 0.952654402298591 0 0.6382317 0 prediction 0.905308804597182 Functional Loss - OR2A14 ENSG00000221938 CDS Human protein_coding chr7:143827032 chr7:143827032 nonsynonymous SNV 0.950 3 21 hPsi_associated_SNPs_2293 0 0 0 0 0 unknown 0.438718598552154 0 0.2764634 0 hPsi_site_334 iPseU_CNN:0.2764634;iRNA_PseU:0 335 chr9 36170892 36170892 1 + T G STAD 36170892 + 36170872 36170912 41 GTATCACCTTCCCCATTGAGTTCAACCATCGGCCCCTGCTC GTATCACCTTCCCCATTGAGGTCAACCATCGGCCCCTGCTC Direct Loss 0.952637509701009 0 0.62772965 0 prediction 0.905275019402018 Functional Loss - CCIN ENSG00000185972 CDS Human protein_coding chr9:36170892 chr9:36170892 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2294 0 0 0 0 0 exosome 0.438718592985119 0 0.2554593 0 hPsi_site_335 iPseU_CNN:0.2554593;iRNA_PseU:0 336 chr4 159092418 159092418 1 + T G UCEC 159092418 + 159092398 159092438 41 ACGCAGTGCCCAGCAGAAGGTTTCTCCGGGTCCTTGGACGC ACGCAGTGCCCAGCAGAAGGGTTCTCCGGGTCCTTGGACGC Direct Loss 0.952547366664365 0 0.4714086 0 prediction 0.90509473332873 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092418 chr4:159092418 nonsynonymous SNV 0.894 3 21 hPsi_associated_SNPs_2295 0 0 0 0 0 Cytosol 0.438718592995102 0 0 0 hPsi_site_336 iPseU_CNN:0;iRNA_PseU:0 337 chr10 119302958 119302958 1 + T C COAD 119302958 + 119302938 119302978 41 GCCGCCGCCGCCGCCGCCGGTAGGGGCGTCTACTCCAACCC GCCGCCGCCGCCGCCGCCGGCAGGGGCGTCTACTCCAACCC Direct Loss 0.952516026207246 0 0.60883814 0 prediction 0.905032052414493 Functional Loss - EMX2 ENSG00000170370 CDS Human protein_coding chr10:119302958 chr10:119302958 synonymous SNV . 0 21 hPsi_associated_SNPs_2296 0 0 0 0 0 exosome 0.438718309916381 0 0.21767628 0 hPsi_site_337 iPseU_CNN:0.21767628;iRNA_PseU:0 338 chr5 172395525 172395525 1 + T C GBM 172395525 + 172395505 172395545 41 TCCAGGTGTACAGAAAGAAATATGTCATCTACATCGAGCGG TCCAGGTGTACAGAAAGAAACATGTCATCTACATCGAGCGG Direct Loss 0.952446150638343 0 0.4184189 0 prediction 0.904892301276685 Functional Loss - RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172395525 chr5:172395525 nonsynonymous SNV 0.982 2 21 hPsi_associated_SNPs_2297 0 0 1 0 2 Ribosome 0.439990218845858 0 0 0 hPsi_site_338 iPseU_CNN:0;iRNA_PseU:0 339 chrX 47040634 47040634 1 + T C rs143203694 47040634 + 47040614 47040654 41 GCCTCCCAAGGTGGGGAGGGTACCTGGGCCACCTCCGAGGA GCCTCCCAAGGTGGGGAGGGCACCTGGGCCACCTCCGAGGA Direct Loss 0.952387448411072 0 0.92509055 0 prediction 0.904774896822143 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47040634 chrX:47040634 synonymous SNV . 0 21 hPsi_associated_SNPs_2298 1 0 1 0 1 Ribosome 0.438718594223197 0 0.8501811 0 hPsi_site_339 iPseU_CNN:0.8501811;iRNA_PseU:0 340 chr20 23425456 23425456 1 + T G UCEC 23425456 + 23425436 23425476 41 CCATGCCCTGGATAAACTATTTCCAGCTCTGGAACAATTCC CCATGCCCTGGATAAACTATGTCCAGCTCTGGAACAATTCC Direct Loss 0.952357680613336 0 0.38214093 0 prediction 0.904715361226672 Functional Loss - CSTL1 ENSG00000125823 CDS Human protein_coding chr20:23425456 chr20:23425456 nonsynonymous SNV 0.873 0 21 hPsi_associated_SNPs_2299 0 0 0 0 0 unknown 0.438718507514674 0 0 0 hPsi_site_340 iPseU_CNN:0;iRNA_PseU:0 341 chr8 128753004 128753004 1 + T C UCS 128753004 + 128752984 128753024 41 GGAACGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAG GGAACGAGCTAAAACGGAGCCTTTTTGCCCTGCGTGACCAG Direct Loss 0.952342693944582 0 0.4187237 0 prediction 0.904685387889165 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128753004 chr8:128753004 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_2300 0 0 1 0 0 Cytosol 0.438717716825431 0 0 0 hPsi_site_341 iPseU_CNN:0;iRNA_PseU:0 342 chr8 22864250 22864250 1 + A G LIHC 22864250 - 22864230 22864270 41 GGGGGCAGGATTTCATTAGGTTTGATGGGCCTGGTAGGTTC GGGGGCAGGATTTCATTAGGCTTGATGGGCCTGGTAGGTTC Direct Loss 0.95233732311946 0 0.42515236 0 prediction 0.904674646238919 Functional Loss - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22864250 chr8:22864250 synonymous SNV . 0 21 hPsi_associated_SNPs_2301 0 0 0 0 0 cytosol 0.438549666226255 0 0 0 hPsi_site_342 iPseU_CNN:0;iRNA_PseU:0 343 chr12 51639899 51639899 1 + A G rs114378235 51639899 - 51639879 51639919 41 CCCTCTCCTTTCCAAGTTGTTATCACCGTTGTCTTCCTCAC CCCTCTCCTTTCCAAGTTGTCATCACCGTTGTCTTCCTCAC Direct Loss 0.952284921881706 0 0.7818795 0 prediction 0.904569843763412 Functional Loss - DAZAP2;SMAGP ENSG00000170545;ENSG00000183283 CDS Human other chr12:51639899 chr12:51639899 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2302 0 0 0 0 1 unknown 0.438718766407644 0 0.563759 0 hPsi_site_343 iPseU_CNN:0.563759;iRNA_PseU:0 344 chr2 84518123 84518123 1 + T A LUAD 84518123 + 84518103 84518143 41 TCACTGGATGGTGCACGGGTTTTATATTCCAGAAGGTTGGA TCACTGGATGGTGCACGGGTATTATATTCCAGAAGGTTGGA Direct Loss 0.952195266615626 0 0.49277893 0 prediction 0.904390533231253 Functional Loss - FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518123 chr2:84518123 . . 0 21 hPsi_associated_SNPs_2303 0 0 1 0 0 unknown 0.447451439569285 0 0 0 hPsi_site_344 iPseU_CNN:0;iRNA_PseU:0 345 chr10 15145673 15145673 1 + T A LUSC 15145673 + 15145653 15145693 41 GCCATTGGCGTTAACGAAGTTACCAGAGCCCTGGAAAGGAG GCCATTGGCGTTAACGAAGTAACCAGAGCCCTGGAAAGGAG Direct Loss 0.952160338259035 0 0.3253095 0 prediction 0.90432067651807 Functional Loss - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145673 chr10:15145673 synonymous SNV . 0 21 hPsi_associated_SNPs_2304 0 0 1 0 0 exosome 0.438694694851465 0 0 0 hPsi_site_345 iPseU_CNN:0;iRNA_PseU:0 346 chr6 112421934 112421934 1 + T A rs139932892 112421934 + 112421914 112421954 41 CTGATGTTCCCGTCACTGTTTATGCAACAACGAGAAAGCCA CTGATGTTCCCGTCACTGTTAATGCAACAACGAGAAAGCCA Direct Loss 0.952158874097396 0 0.6439899 0 prediction 0.904317748194791 Functional Loss - FAM229B ENSG00000203778 CDS Human protein_coding chr6:112421934 chr6:112421934 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2305 0 0 1 0 1 Cytosol 0.438719989959727 0 0.2879798 0 hPsi_site_346 iPseU_CNN:0.2879798;iRNA_PseU:0 347 chr20 3804858 3804858 1 + T G rs200309763 3804858 + 3804838 3804878 41 TTGAGGGCATCCTCACCCGCTTCCTGCCACATGGTCAGCTG TTGAGGGCATCCTCACCCGCGTCCTGCCACATGGTCAGCTG Direct Loss 0.952104636732865 0 0.732738 0 prediction 0.90420927346573 Functional Loss - AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3804858 chr20:3804858 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_2306 0 0 0 0 0 Ribosome 0.438560361262992 0 0.465476 0 hPsi_site_347 iPseU_CNN:0.465476;iRNA_PseU:0 348 chr2 9618462 9618462 1 + T C STAD 9618462 + 9618442 9618482 41 TTGGACATCCCAGTAGCAGTTACAATTTTCTTTGGGGCCAA TTGGACATCCCAGTAGCAGTCACAATTTTCTTTGGGGCCAA Direct Loss 0.952082924935457 0 0.8563853 0 prediction 0.904165849870914 Functional Loss - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9618462 chr2:9618462 synonymous SNV . 0 21 hPsi_associated_SNPs_2307 0 0 1 1 2 Ribosome 0.4387185927637 0 0.7127706 0 hPsi_site_348 iPseU_CNN:0.7127706;iRNA_PseU:0 349 chr19 45207358 45207358 1 + T A LUSC 45207358 + 45207338 45207378 41 CGTCGAGACACCCTGCGCCTTATGTGCAGCAGCCCCAGCCC CGTCGAGACACCCTGCGCCTAATGTGCAGCAGCCCCAGCCC Direct Loss 0.951993641395898 0 0.7143063 0 prediction 0.903987282791795 Functional Loss - CEACAM16 ENSG00000213892 CDS Human protein_coding chr19:45207358 chr19:45207358 synonymous SNV . 0 21 hPsi_associated_SNPs_2308 0 0 0 0 1 exosome 0.308621314972662 0 0.4286126 0 hPsi_site_349 iPseU_CNN:0.4286126;iRNA_PseU:0 350 chr15 66782890 66782890 1 + T G LUSC 66782890 + 66782870 66782910 41 GAGGAAGTGGATTTTGCAGGTTGGCTCTGCTCCACCATCGG GAGGAAGTGGATTTTGCAGGGTGGCTCTGCTCCACCATCGG Direct Loss 0.951966936899465 0 0.44881314 0 prediction 0.90393387379893 Functional Loss - MAP2K1 ENSG00000169032 CDS Human protein_coding chr15:66782890 chr15:66782890 synonymous SNV . 0 21 hPsi_associated_SNPs_2309 0 0 1 0 1 Ribosome 0.438718397021981 0 0 0 hPsi_site_350 iPseU_CNN:0;iRNA_PseU:0 351 chrX 134167019 134167019 1 + T C rs766825894 134167019 + 134166999 134167039 41 GCCAGCCAGCCCCTCCCATGTACATTTGGACGCTGTCCTGC GCCAGCCAGCCCCTCCCATGCACATTTGGACGCTGTCCTGC Direct Loss 0.951958230088394 0 0.5023526 0 prediction 0.903916460176789 Functional Loss - RTL8C ENSG00000134590 UTR3 Human protein_coding chrX:134167019 chrX:134167019 . . 0 21 hPsi_associated_SNPs_2310 0 0 1 0 0 unknown 0.438716344902798 0 0.00470520000000008 0 hPsi_site_351 iPseU_CNN:0.00470520000000008;iRNA_PseU:0 352 chr5 139947067 139947067 1 + T C LUSC 139947067 + 139947047 139947087 41 CTAACAACAACCTGGTGATCTATCTTCAGCGTTACATGGAC CTAACAACAACCTGGTGATCCATCTTCAGCGTTACATGGAC Direct Loss 0.951877577153714 0 0.48716784 0 prediction 0.903755154307428 Functional Loss - SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139947067 chr5:139947067 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_2311 0 0 1 0 0 Ribosome 0.438730742990023 0 0 0 hPsi_site_352 iPseU_CNN:0;iRNA_PseU:0 353 chr16 12061593 12061593 1 + T A LUAD 12061593 + 12061573 12061613 41 CATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCAT CATTGCTTTCCACTCCCAGCAATGGAGGAAGGCGCAACCAT Direct Loss 0.951867520172482 0 0.47173634 0 prediction 0.903735040344964 Functional Loss - TNFRSF17 ENSG00000048462 CDS Human protein_coding chr16:12061593 chr16:12061593 synonymous SNV . 0 21 hPsi_associated_SNPs_2312 0 0 0 0 0 exosome 0.438718356834117 0 0 0 hPsi_site_353 iPseU_CNN:0;iRNA_PseU:0 354 chr6 26205013 26205013 1 + T G UCEC 26205013 + 26204993 26205033 41 CGCGGGGGTGTCAAGCGCATTTCTGGTCTCATCTACGAGGA CGCGGGGGTGTCAAGCGCATGTCTGGTCTCATCTACGAGGA Direct Loss 0.951840222953388 0 0.61101884 0 prediction 0.903680445906776 Functional Loss - HIST1H4E ENSG00000198518 CDS Human other chr6:26205013 chr6:26205013 nonsynonymous SNV 0.011 0 21 hPsi_associated_SNPs_2313 0 0 1 0 0 Nucleus 0.438722583782915 0 0.22203768 0 hPsi_site_354 iPseU_CNN:0.22203768;iRNA_PseU:0 355 chr6 43146118 43146118 1 + T C UCEC 43146118 + 43146098 43146138 41 CTAGCCCGCATGCGGTGATGTATGCCCCCACCTCGGGCCTG CTAGCCCGCATGCGGTGATGCATGCCCCCACCTCGGGCCTG Direct Loss 0.951781361297959 0 0.7879476 0 prediction 0.903562722595918 Functional Loss - SRF ENSG00000112658 CDS Human protein_coding chr6:43146118 chr6:43146118 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2314 0 0 1 0 1 Ribosome 0.438718587359899 0 0.5758952 0 hPsi_site_355 iPseU_CNN:0.5758952;iRNA_PseU:0 356 chr1 2938335 2938335 1 + T C COAD 2938335 + 2938315 2938355 41 AAGCGGGCCTGTCTGGGGAGTTTGGACCCCGGCACATGGTC AAGCGGGCCTGTCTGGGGAGCTTGGACCCCGGCACATGGTC Direct Loss 0.95170072013746 0 0.48791772 0 prediction 0.90340144027492 Functional Loss - ACTRT2 ENSG00000169717 CDS Human protein_coding chr1:2938335 chr1:2938335 nonsynonymous SNV 0.859 1 21 hPsi_associated_SNPs_2315 0 0 0 0 0 unknown 0.438718592995102 0 0 0 hPsi_site_356 iPseU_CNN:0;iRNA_PseU:0 357 chr11 7530992 7530992 1 + T G LUAD 7530992 + 7530972 7531012 41 AGGGGTAGGCCGAGCATTGGTTTACCAGCACTCCCCCTCAA AGGGGTAGGCCGAGCATTGGGTTACCAGCACTCCCCCTCAA Direct Loss 0.951638012920041 0 0.66878307 0 prediction 0.903276025840083 Functional Loss - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7530992 chr11:7530992 nonsynonymous SNV 0.519 2 21 hPsi_associated_SNPs_2316 0 0 1 0 0 exosome 0.438718066626606 0 0.33756614 0 hPsi_site_357 iPseU_CNN:0.33756614;iRNA_PseU:0 358 chr8 145745261 145745261 1 + T C ESCA 145745261 + 145745241 145745281 41 AGTGGTACTGCGCGAGTTGGTACACACGTGGCCCTTCCCGC AGTGGTACTGCGCGAGTTGGCACACACGTGGCCCTTCCCGC Direct Loss 0.951564545898511 0 0.9491137 0 prediction 0.903129091797021 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745261 chr8:145745261 nonsynonymous SNV 0.750 4 21 hPsi_associated_SNPs_2317 0 0 1 0 0 chromatin 0.438724354100236 0 0.8982274 0 hPsi_site_358 iPseU_CNN:0.8982274;iRNA_PseU:0 359 chr15 45408446 45408446 1 + T C LUAD 45408446 + 45408426 45408466 41 GGCCTGGAGGGCATTAATATTACACTCACAGGTGAGGGGGC GGCCTGGAGGGCATTAATATCACACTCACAGGTGAGGGGGC Direct Loss 0.951556283355403 0 0.3602184 0 prediction 0.903112566710806 Functional Loss - DUOXA2 ENSG00000140274 CDS Human protein_coding chr15:45408446 chr15:45408446 synonymous SNV . 0 21 hPsi_associated_SNPs_2318 0 0 0 0 1 unknown 0.43854976660645 0 0 0 hPsi_site_359 iPseU_CNN:0;iRNA_PseU:0 360 chr2 201950223 201950223 1 + T C COAD 201950223 + 201950203 201950243 41 GGGTGGCTTTGCAAAGAGTGTTTCCTTTTCTGATGTATTCT GGGTGGCTTTGCAAAGAGTGCTTCCTTTTCTGATGTATTCT Direct Loss 0.951504706311028 0 0.3134824 0 prediction 0.903009412622056 Functional Loss - NDUFB3 ENSG00000119013 CDS Human protein_coding chr2:201950223 chr2:201950223 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_2319 0 0 1 0 1 Ribosome 0.438718564943454 0 0 0 hPsi_site_360 iPseU_CNN:0;iRNA_PseU:0 361 chr14 24571998 24571998 1 + T G UCEC 24571998 + 24571978 24572018 41 TGCACATCCCAACTCTCGATTTTGTGCCCCGGCTCGCCAGT TGCACATCCCAACTCTCGATGTTGTGCCCCGGCTCGCCAGT Direct Loss 0.95137895382572 0 0.93759745 0 prediction 0.90275790765144 Functional Loss - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24571998 chr14:24571998 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_2320 0 0 1 0 1 Endoplasmic reticulum 0.438717893815065 0 0.8751949 0 hPsi_site_361 iPseU_CNN:0.8751949;iRNA_PseU:0 362 chr20 61299200 61299200 1 + T C UCEC 61299200 + 61299180 61299220 41 GCGGCTCGGACGGCCTCATGTACTTCTCACTGTGCCACGCA GCGGCTCGGACGGCCTCATGCACTTCTCACTGTGCCACGCA Direct Loss 0.951232610386474 0 0.90912694 0 prediction 0.902465220772949 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61299200 chr20:61299200 nonsynonymous SNV 0.490 4 21 hPsi_associated_SNPs_2321 0 0 1 1 1 Endoplasmic reticulum 0.43542657538233 0 0.81825388 0 hPsi_site_362 iPseU_CNN:0.81825388;iRNA_PseU:0 363 chr20 44470468 44470468 1 + T C rs73308468 44470468 + 44470448 44470488 41 GAAGCCCCAGGCGAAGCTGGTACCTCTGGCTACAGCTTGCT GAAGCCCCAGGCGAAGCTGGCACCTCTGGCTACAGCTTGCT Direct Loss 0.951199517902327 0 0.85424757 0 prediction 0.902399035804655 Functional Loss - ACOT8;SNX21 ENSG00000101473 UTR3 Human protein_coding chr20:44470468 chr20:44470468 . . 0 21 hPsi_associated_SNPs_2322 0 0 0 0 0 unknown 0.438715058644969 0 0.70849514 0 hPsi_site_363 iPseU_CNN:0.70849514;iRNA_PseU:0 364 chr7 6631368 6631368 1 + T G UCEC 6631368 + 6631348 6631388 41 CTCTGTTCGGCAGATTATTTTTTCATCCCTTTTCAGCCCTC CTCTGTTCGGCAGATTATTTGTTCATCCCTTTTCAGCCCTC Direct Loss 0.951134799896577 0 0.60373574 0 prediction 0.902269599793155 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631368 chr7:6631368 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2323 0 0 1 0 2 chromatin 0.438718571433929 0 0.20747148 0 hPsi_site_364 iPseU_CNN:0.20747148;iRNA_PseU:0 365 chr19 45477731 45477731 1 + T C rs11541461 45477731 + 45477711 45477751 41 ATCTCAGAGCACGAGCACTTTACAGACTTCAACGCCACGTC ATCTCAGAGCACGAGCACTTCACAGACTTCAACGCCACGTC Direct Loss 0.951101827776744 0 0.55391747 0 prediction 0.902203655553487 Functional Loss - CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45477731 chr19:45477731 synonymous SNV . 0 21 hPsi_associated_SNPs_2324 0 0 1 0 1 Cytosol 0.428021935377009 0 0.10783494 0 hPsi_site_365 iPseU_CNN:0.10783494;iRNA_PseU:0 366 chr19 15839343 15839343 1 + T G STAD 15839343 + 15839323 15839363 41 TGGTGGTGACCTCGGCCATTTTCCAACTGACTTTCTGTGGA TGGTGGTGACCTCGGCCATTGTCCAACTGACTTTCTGTGGA Direct Loss 0.951053108409511 0 0.3348337 0 prediction 0.902106216819022 Functional Loss - OR10H2 ENSG00000171942 CDS Human protein_coding chr19:15839343 chr19:15839343 nonsynonymous SNV 0.029 4 21 hPsi_associated_SNPs_2325 0 0 0 0 0 unknown 0.440103725882738 0 0 0 hPsi_site_366 iPseU_CNN:0;iRNA_PseU:0 367 chr11 6129393 6129393 1 + T G UCEC 6129393 + 6129373 6129413 41 TCTGCATGGCAGTAGACAGATACATAGCCATCTGTCGCCCT TCTGCATGGCAGTAGACAGAGACATAGCCATCTGTCGCCCT Direct Loss 0.95088130211294 0 0.7961101 0 prediction 0.90176260422588 Functional Loss - OR56B4 ENSG00000180919 CDS Human protein_coding chr11:6129393 chr11:6129393 nonsynonymous SNV 0.590 3 21 hPsi_associated_SNPs_2326 0 0 0 0 0 unknown 0.438722120472171 0 0.5922202 0 hPsi_site_367 iPseU_CNN:0.5922202;iRNA_PseU:0 368 chr17 61779796 61779796 1 + T C rs537630353 61779796 + 61779776 61779816 41 GGATGGGCGGGGCTGGTTCTTAGGTTTCCTGCTCTTTGGGT GGATGGGCGGGGCTGGTTCTCAGGTTTCCTGCTCTTTGGGT Direct Loss 0.950841381027074 0 0.4537963 0 prediction 0.901682762054147 Functional Loss - LOC729683 ENSG00000125695;ENSG00000266173 downstream Human other chr17:61779796 chr17:61779796 . . 0 21 hPsi_associated_SNPs_2327 0 0 0 0 0 unknown 0.438718592995019 0 0 0 hPsi_site_368 iPseU_CNN:0;iRNA_PseU:0 369 chr11 5602633 5602633 1 + T A GBM 5602633 + 5602613 5602653 41 CCACAGCTTCATCATTATGTTTCCATCCATCTTTCTCCTTG CCACAGCTTCATCATTATGTATCCATCCATCTTTCTCCTTG Direct Loss 0.950839374466067 0 0.3575768 0 prediction 0.901678748932134 Functional Loss - OR52B6 ENSG00000187747 CDS Human protein_coding chr11:5602633 chr11:5602633 nonsynonymous SNV 0.872 2 21 hPsi_associated_SNPs_2328 0 0 0 0 0 unknown 0.438172081509546 0 0 0 hPsi_site_369 iPseU_CNN:0;iRNA_PseU:0 370 chr10 43882343 43882343 1 + T C UCEC 43882343 + 43882323 43882363 41 GTAGCAAACTCAACATCTGCTTCACCCGTCACTCTTCCATC GTAGCAAACTCAACATCTGCCTCACCCGTCACTCTTCCATC Direct Loss 0.950828880611668 0 0.32569033 0 prediction 0.901657761223335 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882343 chr10:43882343 synonymous SNV . 0 21 hPsi_associated_SNPs_2329 0 0 0 0 0 Cytosol 0.438719427692365 0 0 0 hPsi_site_370 iPseU_CNN:0;iRNA_PseU:0 371 chr1 165513993 165513993 1 + T C CHOL 165513993 + 165513973 165514013 41 CCAACACCACCTCTTTGAGGTACCTGGACCTCAGAAATACC CCAACACCACCTCTTTGAGGCACCTGGACCTCAGAAATACC Direct Loss 0.950826491944479 0 0.76883346 0 prediction 0.901652983888958 Functional Loss - LRRC52 ENSG00000162763 CDS Human protein_coding chr1:165513993 chr1:165513993 nonsynonymous SNV 0.993 0 21 hPsi_associated_SNPs_2330 0 0 0 0 0 unknown 0.438718592995069 0 0.53766692 0 hPsi_site_371 iPseU_CNN:0.53766692;iRNA_PseU:0 372 chr17 656212 656212 1 + T C rs528005849 656212 + 656192 656232 41 AGCTGCTGGTCTACGGCTTGTACAAACAGGCCACCCAGGGC AGCTGCTGGTCTACGGCTTGCACAAACAGGCCACCCAGGGC Direct Loss 0.950819441406486 0 0.6402445 0 prediction 0.901638882812972 Functional Loss - DBIL5P ENSG00000231784 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:656212 chr17:656212 . . 0 21 hPsi_associated_SNPs_2331 0 0 0 0 0 unknown 0.43871689977581 0 0.280489 0 hPsi_site_372 iPseU_CNN:0.280489;iRNA_PseU:0 373 chr1 40872508 40872508 1 + T A KIRC 40872508 + 40872488 40872528 41 ATATCCAGGGTAAAGTCAGTTAACCTCGACCAGTGGACTCA ATATCCAGGGTAAAGTCAGTAAACCTCGACCAGTGGACTCA Direct Loss 0.950800691219395 0 0.7927003 0 prediction 0.901601382438789 Functional Loss - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40872508 chr1:40872508 synonymous SNV . 0 21 hPsi_associated_SNPs_2332 0 0 1 0 1 Ribosome 0.43871859335298 0 0.5854006 0 hPsi_site_373 iPseU_CNN:0.5854006;iRNA_PseU:0 374 chr6 27833369 27833369 1 + T C COAD 27833369 + 27833349 27833389 41 GACAACAAGAAGACCCGCATTATCCCGCGCCACTTGCAGCT GACAACAAGAAGACCCGCATCATCCCGCGCCACTTGCAGCT Direct Loss 0.950790709192545 0 0.3455193 0 prediction 0.90158141838509 Functional Loss - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833369 chr6:27833369 synonymous SNV . 0 21 hPsi_associated_SNPs_2333 0 0 1 0 0 exosome 0.438718585773942 0 0 0 hPsi_site_374 iPseU_CNN:0;iRNA_PseU:0 375 chr10 124896996 124896996 1 + T C LUSC 124896996 + 124896976 124897016 41 AGACGCAGGTCAAGATCTGGTTCCAGAACCGCCGCAACAAG AGACGCAGGTCAAGATCTGGCTCCAGAACCGCCGCAACAAG Direct Loss 0.9507619818143 0 0.6371067 0 prediction 0.9015239636286 Functional Loss - HMX3 ENSG00000188620 CDS Human protein_coding chr10:124896996 chr10:124896996 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2334 0 0 0 0 0 nucleolus 0.438718086629695 0 0.2742134 0 hPsi_site_375 iPseU_CNN:0.2742134;iRNA_PseU:0 376 chr5 137522986 137522986 1 + T G UCEC 137522986 + 137522966 137523006 41 AGAAACCATTCCTTCGAAATTTACTTCCCCGAACACCAACC AGAAACCATTCCTTCGAAATGTACTTCCCCGAACACCAACC Direct Loss 0.950732805929298 0 0.41116944 0 prediction 0.901465611858596 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137522986 chr5:137522986 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_2335 0 0 1 0 0 Nucleus 0.438721050225784 0 0 0 hPsi_site_376 iPseU_CNN:0;iRNA_PseU:0 377 chr7 134260641 134260641 1 + T C UCEC 134260641 + 134260621 134260661 41 CACTCCAAGGGCATCACCGTTACGGCCTACAGCCCCCTGGG CACTCCAAGGGCATCACCGTCACGGCCTACAGCCCCCTGGG Direct Loss 0.950700380039114 0 0.7862419 0 prediction 0.901400760078229 Functional Loss - AKR1B15 ENSG00000227471 CDS Human protein_coding chr7:134260641 chr7:134260641 synonymous SNV . 0 21 hPsi_associated_SNPs_2336 0 0 0 0 2 exosome 0.43871899374242 0 0.5724838 0 hPsi_site_377 iPseU_CNN:0.5724838;iRNA_PseU:0 378 chr19 51226809 51226809 1 + T G COAD 51226809 + 51226789 51226829 41 GCAGCCTGGCTTTTGGGGGCTTTGGTGGTCCCCCAGCTCTT GCAGCCTGGCTTTTGGGGGCGTTGGTGGTCCCCCAGCTCTT Direct Loss 0.95069267868252 0 0.74783844 0 prediction 0.90138535736504 Functional Loss - CLEC11A ENSG00000105472 CDS Human protein_coding chr19:51226809 chr19:51226809 synonymous SNV . 0 21 hPsi_associated_SNPs_2337 0 0 0 0 0 Ribosome 0.438718592853166 0 0.49567688 0 hPsi_site_378 iPseU_CNN:0.49567688;iRNA_PseU:0 Hematocrit 379 chr11 118886068 118886068 1 + T G UCEC 118886068 + 118886048 118886088 41 AGACCGAGTTGGGGCCAACTTTGATCACAGCTCCAGGACCA AGACCGAGTTGGGGCCAACTGTGATCACAGCTCCAGGACCA Direct Loss 0.950681221726433 0 0.36467496 0 prediction 0.901362443452865 Functional Loss - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118886068 chr11:118886068 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2338 0 0 1 2 3 Cytosol 0.438718593116397 0 0 0 hPsi_site_379 iPseU_CNN:0;iRNA_PseU:0 380 chr16 85952145 85952145 1 + T C rs142267779 85952145 + 85952125 85952165 41 GGCTGCCCGGCACCAAGCTGTATGGGCCCGAGGGCCTGGAG GGCTGCCCGGCACCAAGCTGCATGGGCCCGAGGGCCTGGAG Direct Loss 0.950645359851337 0 0.62987393 0 prediction 0.901290719702674 Functional Loss - IRF8 ENSG00000140968 CDS Human protein_coding chr16:85952145 chr16:85952145 nonsynonymous SNV 0.652 3 21 hPsi_associated_SNPs_2339 0 0 0 0 0 Endoplasmic reticulum 0.438718555395054 0 0.25974786 0 hPsi_site_380 iPseU_CNN:0.25974786;iRNA_PseU:0 381 chr17 21087044 21087044 1 + T C COAD 21087044 + 21087024 21087064 41 GCTGGGATCAGCTACCGTGGTACCATCATGGACACCACAGT GCTGGGATCAGCTACCGTGGCACCATCATGGACACCACAGT Direct Loss 0.950554253043916 0 0.8620759 0 prediction 0.901108506087831 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21087044 chr17:21087044 synonymous SNV . 0 21 hPsi_associated_SNPs_2340 0 0 1 0 1 Endoplasmic reticulum 0.43871853634755 0 0.7241518 0 hPsi_site_381 iPseU_CNN:0.7241518;iRNA_PseU:0 382 chr19 41884359 41884359 1 + T C STAD 41884359 + 41884339 41884379 41 AGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCCTCTTCCC AGTCCCTGAGGGGTTTGCAGCTCCTGTCACCGCCTCTTCCC Direct Loss 0.950517522257919 0 0.64052886 0 prediction 0.901035044515839 Functional Loss - TMEM91 ENSG00000142046;ENSG00000248098;ENSG00000255730 CDS Human other chr19:41884359 chr19:41884359 nonsynonymous SNV 0.415 1 21 hPsi_associated_SNPs_2341 0 0 1 0 1 chromatin 0.43844764115111 0 0.28105772 0 hPsi_site_382 iPseU_CNN:0.28105772;iRNA_PseU:0 383 chr14 104578315 104578315 1 + T A rs199572221 104578315 + 104578295 104578335 41 ACAGAGCCTGGAGGGTGCGGTTGGTGCCCAGGCCCCATGCC ACAGAGCCTGGAGGGTGCGGATGGTGCCCAGGCCCCATGCC Direct Loss 0.950516353215563 0 0.75161105 0 prediction 0.901032706431126 Functional Loss - ASPG ENSG00000166183 CDS Human protein_coding chr14:104578315 chr14:104578315 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_2342 0 0 0 0 2 exosome 0.438718592995074 0 0.5032221 0 hPsi_site_383 iPseU_CNN:0.5032221;iRNA_PseU:0 384 chr1 1262943 1262943 1 + T C UCEC 1262943 + 1262923 1262963 41 ACAACGCCTCGCTGGCCGCCTACCACCCCTGGGTCGTGCGC ACAACGCCTCGCTGGCCGCCCACCACCCCTGGGTCGTGCGC Direct Loss 0.95045688775075 0 0.9208628 0 prediction 0.9009137755015 Functional Loss - CPTP ENSG00000224051 CDS Human protein_coding chr1:1262943 chr1:1262943 nonsynonymous SNV 0.785 0 21 hPsi_associated_SNPs_2343 0 0 1 0 0 Ribosome 0.442144781848871 0 0.8417256 0 hPsi_site_384 iPseU_CNN:0.8417256;iRNA_PseU:0 385 chr8 144461599 144461599 1 + T G UCEC 144461599 + 144461579 144461619 41 CCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTCACCACCTG CCAGGCCCAGGAATGTGTGTGTGAGGGCCTCTCACCACCTG Direct Loss 0.950369193615113 0 0.6405591 0 prediction 0.900738387230225 Functional Loss - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144461599 chr8:144461599 nonsynonymous SNV 0.805 2 21 hPsi_associated_SNPs_2344 0 0 1 0 1 Ribosome 0.43916965615246 0 0.2811182 0 hPsi_site_385 iPseU_CNN:0.2811182;iRNA_PseU:0 386 chr12 122691149 122691149 1 + T C HNSC 122691149 + 122691129 122691169 41 CCTTCAGGCTGTTCCAAGGATACCTTCTTGCTCCTGGCCAT CCTTCAGGCTGTTCCAAGGACACCTTCTTGCTCCTGGCCAT Direct Loss 0.950276826457082 0 0.65506136 0 prediction 0.900553652914165 Functional Loss - B3GNT4 ENSG00000176383 CDS Human protein_coding chr12:122691149 chr12:122691149 synonymous SNV . 0 21 hPsi_associated_SNPs_2345 0 0 0 0 0 chromatin 0.438718150163663 0 0.31012272 0 hPsi_site_386 iPseU_CNN:0.31012272;iRNA_PseU:0 387 chr4 3769612 3769612 1 + T C STAD 3769612 + 3769592 3769632 41 AGTTCTTCTTCTGGATCGGCTACTGCAACAGCTCGCTCAAC AGTTCTTCTTCTGGATCGGCCACTGCAACAGCTCGCTCAAC Direct Loss 0.950263083939414 0 0.8641032 0 prediction 0.900526167878828 Functional Loss - ADRA2C ENSG00000184160 CDS Human protein_coding chr4:3769612 chr4:3769612 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2346 0 0 1 0 0 Ribosome 0.437856452694667 0 0.7282064 0 hPsi_site_387 iPseU_CNN:0.7282064;iRNA_PseU:0 388 chr14 101340859 101340859 1 + T C UCEC 101340859 + 101340839 101340879 41 AGTTGGGGGGTGGGAACGGCTTCATACAGGAGTTGATGCAC AGTTGGGGGGTGGGAACGGCCTCATACAGGAGTTGATGCAC Direct Loss 0.950212460870399 0 0.63837737 0 prediction 0.900424921740798 Functional Loss - MIR337 ENSG00000199151 ncRNA_exonic Human miRNA chr14:101340859 chr14:101340859 . . 0 21 hPsi_associated_SNPs_2347 0 0 0 0 0 unknown 0.438900205049099 0 0.27675474 0 hPsi_site_388 iPseU_CNN:0.27675474;iRNA_PseU:0 389 chr19 3612009 3612009 1 + T C STAD 3612009 + 3611989 3612029 41 GGAAGCCGTGGCGGTGCGAGTATTCCCACTCGCGGTTGACG GGAAGCCGTGGCGGTGCGAGCATTCCCACTCGCGGTTGACG Direct Loss 0.950149383082144 0 0.781459 0 prediction 0.900298766164288 Functional Loss - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612009 chr19:3612009 nonsynonymous SNV 0.723 3 21 hPsi_associated_SNPs_2348 0 0 0 0 0 Ribosome 0.438718604925254 0 0.562918 0 hPsi_site_389 iPseU_CNN:0.562918;iRNA_PseU:0 390 chr12 54385563 54385563 1 + T G COAD 54385563 + 54385543 54385583 41 GCTTAGGTAGTTTCATGTTGTTGGGATTGAGTTTTGAACTC GCTTAGGTAGTTTCATGTTGGTGGGATTGAGTTTTGAACTC Direct Loss 0.950138030582091 0 0.34213138 0 prediction 0.900276061164182 Functional Loss - MIR196A2 ENSG00000207924 ncRNA_exonic Human miRNA chr12:54385563 chr12:54385563 . . 0 21 hPsi_associated_SNPs_2349 0 0 1 0 0 unknown 0.439130177517148 0 0 0 hPsi_site_390 iPseU_CNN:0;iRNA_PseU:0 391 chr1 11907665 11907665 1 + T C UCEC 11907665 + 11907645 11907685 41 ACACGGCATTGTACATGGGATTAGCTCTGGTCTGACCTAGG ACACGGCATTGTACATGGGACTAGCTCTGGTCTGACCTAGG Direct Loss 0.950096732924264 0 0.6867902 0 prediction 0.900193465848528 Functional Loss - NPPA ENSG00000175206 CDS Human protein_coding chr1:11907665 chr1:11907665 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_2350 0 0 0 0 1 exosome 0.438737457095535 0 0.3735804 0 hPsi_site_391 iPseU_CNN:0.3735804;iRNA_PseU:0 392 chr19 41601771 41601771 1 + T C LUAD 41601771 + 41601751 41601791 41 TCCCCTCAGTCGCCTAAGGATATCGACGTGTCCCCCAAACA TCCCCTCAGTCGCCTAAGGACATCGACGTGTCCCCCAAACA Direct Loss 0.95007719243634 0 0.7729846 0 prediction 0.900154384872681 Functional Loss - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41601771 chr19:41601771 synonymous SNV . 0 21 hPsi_associated_SNPs_2351 0 0 0 0 0 unknown 0.438717683453804 0 0.5459692 0 hPsi_site_392 iPseU_CNN:0.5459692;iRNA_PseU:0 393 chr14 101512865 101512865 1 + T C SKCM 101512865 + 101512845 101512885 41 CGTACAGGGTCATCCACTTTTTCAGTATCAAGAGCGCAGAC CGTACAGGGTCATCCACTTTCTCAGTATCAAGAGCGCAGAC Direct Loss 0.9500582249051 0 0.40241247 0 prediction 0.9001164498102 Functional Loss - MIR487B ENSG00000207754 ncRNA_exonic Human miRNA chr14:101512865 chr14:101512865 . . 0 21 hPsi_associated_SNPs_2352 0 0 0 0 0 unknown 0.438695640134631 0 0 0 hPsi_site_393 iPseU_CNN:0;iRNA_PseU:0 394 chr3 63985195 63985195 1 + T C UCEC 63985195 + 63985175 63985215 41 GGACACTTTTGAGGACAAGTTACACCTCCACTCAGCACTCT GGACACTTTTGAGGACAAGTCACACCTCCACTCAGCACTCT Direct Loss 0.950000276798897 0 0.4181443 0 prediction 0.900000553597794 Functional Loss - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63985195 chr3:63985195 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2353 0 0 1 0 1 Cytosol 0.439194636707747 0 0 0 hPsi_site_394 iPseU_CNN:0;iRNA_PseU:0 395 chr6 160212095 160212095 1 + T C LUSC 160212095 + 160212075 160212115 41 CCCCCGGAACCTGGAGCTTTTATCTGTAGCCAGGAAAGAGC CCCCCGGAACCTGGAGCTTTCATCTGTAGCCAGGAAAGAGC Direct Loss 0.949999751203495 0 0.38147682 0 prediction 0.89999950240699 Functional Loss - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212095 chr6:160212095 nonsynonymous SNV 0.605 4 21 hPsi_associated_SNPs_2354 0 0 1 0 1 Cytosol 0.438718069205638 0 0 0 hPsi_site_395 iPseU_CNN:0;iRNA_PseU:0 396 chr1 101704868 101704868 1 + T C HNSC 101704868 + 101704848 101704888 41 TCTTGTCTGGGGCCACCACCTACAAGCTCACTCCCGCCCAG TCTTGTCTGGGGCCACCACCCACAAGCTCACTCCCGCCCAG Direct Loss 0.949955373766657 0 0.58105904 0 prediction 0.899910747533314 Functional Loss - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101704868 chr1:101704868 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2355 0 0 0 0 0 Endoplasmic reticulum 0.439791896397471 0 0.16211808 0 hPsi_site_396 iPseU_CNN:0.16211808;iRNA_PseU:0 397 chr9 19049932 19049932 1 + T C UCEC 19049932 + 19049912 19049952 41 GGAAGTTTTGATTTACGTGTTTGACGTGGAGAGCCGCGAAC GGAAGTTTTGATTTACGTGTCTGACGTGGAGAGCCGCGAAC Direct Loss 0.949831863723455 0 0.40872923 0 prediction 0.899663727446911 Functional Loss - RRAGA ENSG00000155876 CDS Human protein_coding chr9:19049932 chr9:19049932 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2356 0 0 1 0 0 Ribosome 0.438701574705525 0 0 0 hPsi_site_397 iPseU_CNN:0;iRNA_PseU:0 398 chr17 48944098 48944098 1 + T C rs192936305 48944098 + 48944078 48944118 41 GTAGGGCGGCTGACGCCCGGTTTAGGCGGAGAGCGCCGGGC GTAGGGCGGCTGACGCCCGGCTTAGGCGGAGAGCGCCGGGC Direct Loss 0.949771616976275 0 0.8675575 0 prediction 0.899543233952549 Functional Loss - TOB1-AS1 ENSG00000229980 ncRNA_exonic Human processed_transcript chr17:48944098 chr17:48944098 . . 0 21 hPsi_associated_SNPs_2357 0 0 0 0 0 unknown 0.438708170760536 0 0.735115 0 hPsi_site_398 iPseU_CNN:0.735115;iRNA_PseU:0 399 chr1 46033700 46033700 1 + T C STAD 46033700 + 46033680 46033720 41 ATGCTGATGGGACTATATGCTACGACTCCACCCACTACAAG ATGCTGATGGGACTATATGCCACGACTCCACCCACTACAAG Direct Loss 0.949741141553031 0 0.68600446 0 prediction 0.899482283106061 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033700 chr1:46033700 nonsynonymous SNV 0.434 1 21 hPsi_associated_SNPs_2358 0 0 1 1 1 Ribosome 0.437958130161087 0 0.37200892 0 hPsi_site_399 iPseU_CNN:0.37200892;iRNA_PseU:0 400 chr2 101591992 101591992 1 + T G UCEC 101591992 + 101591972 101592012 41 AGCCACCCTGCCCCAAGAGTTACCTGTCCCCGGGCTCAGCC AGCCACCCTGCCCCAAGAGTGACCTGTCCCCGGGCTCAGCC Direct Loss 0.949712658224263 0 0.75152755 0 prediction 0.899425316448527 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101591992 chr2:101591992 stopgain 0.775 0 21 hPsi_associated_SNPs_2359 0 0 1 0 2 cytosol 0.438706133335797 0 0.5030551 0 hPsi_site_400 iPseU_CNN:0.5030551;iRNA_PseU:0 401 chr11 64064987 64064987 1 + T G UCEC 64064987 + 64064967 64065007 41 GAGTGCTGTCGGCGATGCTTTTCCTGCTGATCGGCTGCCTG GAGTGCTGTCGGCGATGCTTGTCCTGCTGATCGGCTGCCTG Direct Loss 0.949701327600845 0 0.8233615 0 prediction 0.89940265520169 Functional Loss - KCNK4 ENSG00000182450 CDS Human protein_coding chr11:64064987 chr11:64064987 nonsynonymous SNV 0.985 2 21 hPsi_associated_SNPs_2360 0 0 0 0 1 exosome 0.439651577219178 0 0.646723 0 hPsi_site_401 iPseU_CNN:0.646723;iRNA_PseU:0 402 chr11 7507162 7507162 1 + T A UCEC 7507162 + 7507142 7507182 41 GGTTCTGTTCCTTGCAGCTTTTCTGCCCCCGCCGCAGTGTA GGTTCTGTTCCTTGCAGCTTATCTGCCCCCGCCGCAGTGTA Direct Loss 0.949700714204707 0 0.7778847 0 prediction 0.899401428409415 Functional Loss - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7507162 chr11:7507162 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_2361 0 0 0 0 2 exosome 0.43872585358941 0 0.5557694 0 hPsi_site_402 iPseU_CNN:0.5557694;iRNA_PseU:0 403 chr10 50819182 50819182 1 + T C rs8175353 50819182 + 50819162 50819202 41 GTGCTGTTTGCTTCCAAGGCTATCCTGCAGCTGCTAGTGAA GTGCTGTTTGCTTCCAAGGCCATCCTGCAGCTGCTAGTGAA Direct Loss 0.949700255180284 0 0.6898928 0 prediction 0.899400510360568 Functional Loss - SLC18A3 ENSG00000187714 CDS Human protein_coding chr10:50819182 chr10:50819182 synonymous SNV . 0 21 hPsi_associated_SNPs_2362 0 0 0 0 0 exosome 0.439756696016615 0 0.3797856 0 hPsi_site_403 iPseU_CNN:0.3797856;iRNA_PseU:0 404 chr15 66811286 66811286 1 + T G STAD 66811286 + 66811266 66811306 41 TTGAAGATTAATCTGCCAGTTACTGCCCTTCCTCCCCTTTG TTGAAGATTAATCTGCCAGTGACTGCCCTTCCTCCCCTTTG Direct Loss 0.949674116635608 0 0.86115324 0 prediction 0.899348233271215 Functional Loss - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66811286 chr15:66811286 synonymous SNV . 0 21 hPsi_associated_SNPs_2363 0 0 1 0 1 Ribosome 0.438718362014855 0 0.72230648 0 hPsi_site_404 iPseU_CNN:0.72230648;iRNA_PseU:0 405 chr5 121187671 121187671 1 + T C LIHC 121187671 + 121187651 121187691 41 GCGGCGCTATGCTGTCCTGCTTCAGGCTCCTCTCCAGGCAC GCGGCGCTATGCTGTCCTGCCTCAGGCTCCTCTCCAGGCAC Direct Loss 0.949602498859956 0 0.8201289 0 prediction 0.899204997719911 Functional Loss - FTMT ENSG00000181867 CDS Human protein_coding chr5:121187671 chr5:121187671 nonsynonymous SNV 0.033 1 21 hPsi_associated_SNPs_2364 0 0 0 0 0 unknown 0.43872620546939 0 0.6402578 0 hPsi_site_405 iPseU_CNN:0.6402578;iRNA_PseU:0 406 chr10 26998637 26998637 1 + T G rs77826284 26998637 + 26998617 26998657 41 TGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCGC TGATGGGAAAGGGAAAGCCTGTCGACCAATTATTGTGGCGC Direct Loss 0.949587910228093 0 0.7388728 0 prediction 0.899175820456185 Functional Loss - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26998637 chr10:26998637 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2365 2 0 1 0 2 Ribosome 0.438718593137837 0 0.4777456 0 hPsi_site_406 iPseU_CNN:0.4777456;iRNA_PseU:0 407 chr7 149404765 149404765 1 + T A rs76091259 149404765 + 149404745 149404785 41 CTTACACTTCCATCAGGGGGTATAGCTCAGGGGTAGAGCAT CTTACACTTCCATCAGGGGGAATAGCTCAGGGGTAGAGCAT Direct Loss 0.949420832235178 0 0.33312893 0 prediction 0.898841664470356 Functional Loss - ZNF767P;KRBA1 ENSG00000133624;ENSG00000133619 intergenic Human other chr7:149404765 chr7:149404765 . . 0 21 hPsi_associated_SNPs_2366 0 0 1 0 0 unknown 0.438718593246723 0 0 0 hPsi_site_407 iPseU_CNN:0;iRNA_PseU:0 408 chr11 113661635 113661635 1 + T C COAD 113661635 + 113661615 113661655 41 GGAAGCCAGACTCCACTGCTTACGTTGCCATGATCCCTCAG GGAAGCCAGACTCCACTGCTCACGTTGCCATGATCCCTCAG Direct Loss 0.94929192340465 0 0.62243223 0 prediction 0.898583846809301 Functional Loss - CLDN25;USP28 ENSG00000256167 ncRNA_exonic Human transcribed_processed_pseudogene chr11:113661635 chr11:113661635 . . 0 21 hPsi_associated_SNPs_2367 0 0 0 0 0 unknown 0.438630679157014 0 0.24486446 0 hPsi_site_408 iPseU_CNN:0.24486446;iRNA_PseU:0 409 chr12 5153912 5153912 1 + T C STAD 5153912 + 5153892 5153932 41 GGACGTGTTCGCGGACGAGATACGCTTCTACCAGCTGGGGG GGACGTGTTCGCGGACGAGACACGCTTCTACCAGCTGGGGG Direct Loss 0.94927497957745 0 0.80650645 0 prediction 0.8985499591549 Functional Loss - KCNA5 ENSG00000130037 CDS Human protein_coding chr12:5153912 chr12:5153912 nonsynonymous SNV 0.121 2 21 hPsi_associated_SNPs_2368 0 0 0 0 0 exosome 0.438125979663679 0 0.6130129 0 hPsi_site_409 iPseU_CNN:0.6130129;iRNA_PseU:0 410 chr20 45947854 45947854 1 + T C SKCM 45947854 + 45947834 45947874 41 ACAGGCTAAGAGTCACCACTTACCAGGCCAGCCCCGGTCTT ACAGGCTAAGAGTCACCACTCACCAGGCCAGCCCCGGTCTT Direct Loss 0.94923694775756 0 0.67972857 0 prediction 0.898473895515121 Functional Loss - LOC100131496 ENSG00000267882 CDS Human antisense chr20:45947854 chr20:45947854 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2369 0 0 0 0 0 unknown 0.438718575086411 0 0.35945714 0 hPsi_site_410 iPseU_CNN:0.35945714;iRNA_PseU:0 411 chr1 47282778 47282778 1 + T C SKCM 47282778 + 47282758 47282798 41 TCAAGGAGAGCTTCCGCCTCTACCCACCTGTGCCCCAGGTG TCAAGGAGAGCTTCCGCCTCCACCCACCTGTGCCCCAGGTG Direct Loss 0.949199733078652 0 0.345325 0 prediction 0.898399466157304 Functional Loss - CYP4B1 ENSG00000142973 CDS Human protein_coding chr1:47282778 chr1:47282778 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2370 0 0 0 0 2 exosome 0.438719835017306 0 0 0 hPsi_site_411 iPseU_CNN:0;iRNA_PseU:0 412 chr11 57982873 57982873 1 + T G UCEC 57982873 + 57982853 57982893 41 TTTATTGTGGGTTTATCAGTTATCATCTTCCCCTTTACACT TTTATTGTGGGTTTATCAGTGATCATCTTCCCCTTTACACT Direct Loss 0.94914071212087 0 0.69803035 0 prediction 0.898281424241739 Functional Loss - OR1S1 ENSG00000172774 CDS Human other chr11:57982873 chr11:57982873 synonymous SNV . 0 21 hPsi_associated_SNPs_2371 0 0 0 0 0 unknown 0.438718962811886 0 0.3960607 0 hPsi_site_412 iPseU_CNN:0.3960607;iRNA_PseU:0 413 chr3 98251352 98251352 1 + T A rs61736100 98251352 + 98251332 98251372 41 TAGTCTGTGCCAGCATCTGGTTTATCTCCTGCCTGCTGGGG TAGTCTGTGCCAGCATCTGGATTATCTCCTGCCTGCTGGGG Direct Loss 0.949104072567243 0 0.44873068 0 prediction 0.898208145134486 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251352 chr3:98251352 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_2372 0 0 0 0 0 exosome 0.438718592995497 0 0 0 hPsi_site_413 iPseU_CNN:0;iRNA_PseU:0 414 chr17 4858427 4858427 1 + T C UCEC 4858427 + 4858407 4858447 41 ACAAGCTGGCCATGCAGGAGTTCATGATTCTGCCTGTGGGA ACAAGCTGGCCATGCAGGAGCTCATGATTCTGCCTGTGGGA Direct Loss 0.94910365232101 0 0.29925027 0 prediction 0.898207304642021 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4858427 chr17:4858427 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2373 0 0 0 0 1 nucleus 0.438694618162179 0 0 0 hPsi_site_414 iPseU_CNN:0;iRNA_PseU:0 415 chr5 41929873 41929873 1 + T G PRAD 41929873 + 41929853 41929893 41 GTATGGAGCTGTCACTTCTTTTTTACACTCCCTGATCATTC GTATGGAGCTGTCACTTCTTGTTTACACTCCCTGATCATTC Direct Loss 0.949065280412155 0 0.5323044 0 prediction 0.89813056082431 Functional Loss - FBXO4 ENSG00000151876 CDS Human protein_coding chr5:41929873 chr5:41929873 nonsynonymous SNV 0.909 4 21 hPsi_associated_SNPs_2374 0 0 1 0 1 Cytosol 0.438718574890076 0 0.0646088 0 hPsi_site_415 iPseU_CNN:0.0646088;iRNA_PseU:0 416 chr4 17616298 17616298 1 + T G GBM 17616298 + 17616278 17616318 41 ATGGCGGCTCCACTAGGGGGTATGTTTTCTGGGCAGCCACC ATGGCGGCTCCACTAGGGGGGATGTTTTCTGGGCAGCCACC Direct Loss 0.948946182729534 0 0.72074395 0 prediction 0.897892365459068 Functional Loss - MED28 ENSG00000118579 CDS Human protein_coding chr4:17616298 chr4:17616298 synonymous SNV . 0 21 hPsi_associated_SNPs_2375 0 0 1 0 0 Ribosome 0.439897969938689 0 0.4414879 0 hPsi_site_416 iPseU_CNN:0.4414879;iRNA_PseU:0 417 chr19 38782512 38782512 1 + T A LUSC 38782512 + 38782492 38782532 41 CGGGGCTGTTCGTGATGGTGTTGATCCTCTTCCTGGGAGCC CGGGGCTGTTCGTGATGGTGATGATCCTCTTCCTGGGAGCC Direct Loss 0.948942648936253 0 0.809259 0 prediction 0.897885297872506 Functional Loss - SPINT2 ENSG00000167642 CDS Human protein_coding chr19:38782512 chr19:38782512 nonsynonymous SNV 0.888 2 21 hPsi_associated_SNPs_2376 0 0 1 0 1 Ribosome 0.438718593247461 0 0.618518 0 hPsi_site_417 iPseU_CNN:0.618518;iRNA_PseU:0 418 chr19 7696389 7696389 1 + T C UCEC 7696389 + 7696369 7696409 41 TAGAGGAATTCAAAGAGAGGTTACGGAAGCGGCGGGAGGAG TAGAGGAATTCAAAGAGAGGCTACGGAAGCGGCGGGAGGAG Direct Loss 0.948938385381693 0 0.25678462 0 prediction 0.897876770763387 Functional Loss - PET100 ENSG00000229833 CDS Human protein_coding chr19:7696389 chr19:7696389 synonymous SNV . 0 21 hPsi_associated_SNPs_2377 0 0 1 0 1 Ribosome 0.4387185940798 0 0 0 hPsi_site_418 iPseU_CNN:0;iRNA_PseU:0 419 chr21 31812721 31812721 1 + T C HNSC 31812721 + 31812701 31812741 41 TGAGGTATCCAGTTTCCACTTATAATTTGTTCTACCCCAGC TGAGGTATCCAGTTTCCACTCATAATTTGTTCTACCCCAGC Direct Loss 0.948938045344335 0 0.29102808 0 prediction 0.89787609068867 Functional Loss - KRTAP15-1 ENSG00000186970 CDS Human protein_coding chr21:31812721 chr21:31812721 nonsynonymous SNV 0.020 2 21 hPsi_associated_SNPs_2378 0 0 0 0 0 unknown 0.438716497785393 0 0 0 hPsi_site_419 iPseU_CNN:0;iRNA_PseU:0 420 chrX 139865327 139865327 1 + T C rs73576536 139865327 + 139865307 139865347 41 ATATCCTGTGCTTACAATGTTTCCAATGTCCAGGGTTTCCG ATATCCTGTGCTTACAATGTCTCCAATGTCCAGGGTTTCCG Direct Loss 0.94893407626303 0 0.36998868 0 prediction 0.897868152526061 Functional Loss - CDR1 ENSG00000184258 downstream Human protein_coding chrX:139865327 chrX:139865327 . . 0 21 hPsi_associated_SNPs_2379 0 0 1 0 0 exosome 0.438622400463738 0 0 0 hPsi_site_420 iPseU_CNN:0;iRNA_PseU:0 421 chr1 160151770 160151770 1 + T G LUAD 160151770 + 160151750 160151790 41 GGAGACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGCA GGAGACACTCTTGGCTGCATGTCTGTCCTACACTCCAGGCA Direct Loss 0.948902620494722 0 0.39950675 0 prediction 0.897805240989443 Functional Loss - ATP1A4 ENSG00000132681 CDS Human protein_coding chr1:160151770 chr1:160151770 nonsynonymous SNV 0.956 2 21 hPsi_associated_SNPs_2380 0 0 0 1 2 exosome 0.438718588973955 0 0 0 hPsi_site_421 iPseU_CNN:0;iRNA_PseU:0 422 chr2 18112294 18112294 1 + T A SKCM 18112294 + 18112274 18112314 41 CCATGGTGTTTGGTGAGTTTTTCCATCGCCCTGGACAAGAC CCATGGTGTTTGGTGAGTTTATCCATCGCCCTGGACAAGAC Direct Loss 0.948885655190439 0 0.58034724 0 prediction 0.897771310380878 Functional Loss - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18112294 chr2:18112294 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2381 0 0 0 0 1 Cytosol 0.438803084898463 0 0.16069448 0 hPsi_site_422 iPseU_CNN:0.16069448;iRNA_PseU:0 423 chr5 177035941 177035941 1 + T C STAD 177035941 + 177035921 177035961 41 CCTCGGGAATCACAACTGGGTACAAGACATTTCGCCACCTG CCTCGGGAATCACAACTGGGCACAAGACATTTCGCCACCTG Direct Loss 0.948860276105475 0 0.9720016 0 prediction 0.89772055221095 Functional Loss - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177035941 chr5:177035941 nonsynonymous SNV 0.987 1 21 hPsi_associated_SNPs_2382 0 0 1 0 2 Ribosome 0.438683052495925 0 0.9440032 0 hPsi_site_423 iPseU_CNN:0.9440032;iRNA_PseU:0 424 chr7 141619042 141619042 1 + T C rs79737608 141619042 + 141619022 141619062 41 GAGCAATGGCTGTGGACCGTTATGTGGCTGTCTGTAACCCT GAGCAATGGCTGTGGACCGTCATGTGGCTGTCTGTAACCCT Direct Loss 0.948817096380243 0 0.6224126 0 prediction 0.897634192760486 Functional Loss - OR9A4 ENSG00000258083 CDS Human protein_coding chr7:141619042 chr7:141619042 nonsynonymous SNV 0.942 1 21 hPsi_associated_SNPs_2383 0 0 0 0 0 unknown 0.438718681930333 0 0.2448252 0 hPsi_site_424 iPseU_CNN:0.2448252;iRNA_PseU:0 425 chrX 152916313 152916313 1 + T G rs184700190 152916313 + 152916293 152916333 41 ACATCTGGTGGGCTGTTTTGTTTTTTTTTTTTCCTCTTCCC ACATCTGGTGGGCTGTTTTGGTTTTTTTTTTTCCTCTTCCC Direct Loss 0.948816248080739 0 0.34810105 0 prediction 0.897632496161478 Functional Loss - DUSP9 ENSG00000130829 UTR3 Human protein_coding chrX:152916313 chrX:152916313 . . 0 21 hPsi_associated_SNPs_2384 0 0 1 0 0 cytosol 0.438718592995248 0 0 0 hPsi_site_425 iPseU_CNN:0;iRNA_PseU:0 426 chr20 10287094 10287094 1 + T G rs184199420 10287094 + 10287074 10287114 41 AACTCCTTGAGGTCTTGAGTTTCATTTTTCATTTTCTCTCC AACTCCTTGAGGTCTTGAGTGTCATTTTTCATTTTCTCTCC Direct Loss 0.948764594979401 0 0.34911335 0 prediction 0.897529189958801 Functional Loss - SNAP25 ENSG00000227906 ncRNA_intronic Human antisense chr20:10287094 chr20:10287094 . . 0 21 hPsi_associated_SNPs_2385 0 0 1 1 0 Cytosol 0.438715348609841 0 0 0 hPsi_site_426 iPseU_CNN:0;iRNA_PseU:0 427 chr4 24801537 24801537 1 + T C HNSC 24801537 + 24801517 24801557 41 GCGAGTCCACCGGGCCCCACTACAACCCGCTGGCCGTGCCG GCGAGTCCACCGGGCCCCACCACAACCCGCTGGCCGTGCCG Direct Loss 0.948700007503104 0 0.68153036 0 prediction 0.897400015006208 Functional Loss - SOD3 ENSG00000109610 CDS Human protein_coding chr4:24801537 chr4:24801537 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_2386 0 0 0 0 0 Endoplasmic reticulum 0.438810436004067 0 0.36306072 0 hPsi_site_427 iPseU_CNN:0.36306072;iRNA_PseU:0 428 chr17 34893846 34893846 1 + T G COAD 34893846 + 34893826 34893866 41 TGGCACACGGGTTGGTCTATTAAATGCCAACCGCGAAGGAA TGGCACACGGGTTGGTCTATGAAATGCCAACCGCGAAGGAA Direct Loss 0.948637754431145 0 0.5459383 0 prediction 0.89727550886229 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893846 chr17:34893846 stopgain 0.989 0 21 hPsi_associated_SNPs_2387 0 0 1 0 0 Ribosome 0.43855613146378 0 0.0918766 0 hPsi_site_428 iPseU_CNN:0.0918766;iRNA_PseU:0 429 chr5 150405000 150405000 1 + T A UCEC 150405000 + 150404980 150405020 41 TCAAGCAGTATGCTGGCAAATACGTCCTCTTTGTCAACGTG TCAAGCAGTATGCTGGCAAAAACGTCCTCTTTGTCAACGTG Direct Loss 0.948551860332695 0 0.64664745 0 prediction 0.897103720665389 Functional Loss - GPX3 ENSG00000211445 CDS Human protein_coding chr5:150405000 chr5:150405000 unknown 0.948 0 21 hPsi_associated_SNPs_2388 0 0 1 0 2 Ribosome 0.438693910854392 0 0.2932949 0 hPsi_site_429 iPseU_CNN:0.2932949;iRNA_PseU:0 430 chr1 234510059 234510059 1 + T C LUAD 234510059 + 234510039 234510079 41 GGATGAGTACTGGAAGTGTTTAGATGAGAACTTAGAGGATG GGATGAGTACTGGAAGTGTTCAGATGAGAACTTAGAGGATG Direct Loss 0.948537981046531 0 0.71443766 0 prediction 0.897075962093062 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234510059 chr1:234510059 nonsynonymous SNV 0.648 5 21 hPsi_associated_SNPs_2389 0 0 1 0 2 Cytosol 0.438717053334019 0 0.42887532 0 hPsi_site_430 iPseU_CNN:0.42887532;iRNA_PseU:0 431 chr11 5410763 5410763 1 + T C rs377377120 5410763 + 5410743 5410783 41 ATTTTCATCCCCTTTTTCTTTATGTACATGGTTGCCATCTC ATTTTCATCCCCTTTTTCTTCATGTACATGGTTGCCATCTC Direct Loss 0.948533691310204 0 0.18724301 0 prediction 0.897067382620407 Functional Loss - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410763 chr11:5410763 synonymous SNV . 0 21 hPsi_associated_SNPs_2390 0 0 0 0 0 nucleoplasm 0.43871859439893 0 0 0 hPsi_site_431 iPseU_CNN:0;iRNA_PseU:0 432 chr11 5443739 5443739 1 + T C rs2736587 5443739 + 5443719 5443759 41 GAGGCCTGTTTTGCTCAGTTTTTCTTCCTTCATGGATTCTC GAGGCCTGTTTTGCTCAGTTCTTCTTCCTTCATGGATTCTC Direct Loss 0.948523597775905 0 0.63936174 0 prediction 0.89704719555181 Functional Loss - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5443739 chr11:5443739 synonymous SNV . 0 21 hPsi_associated_SNPs_2391 0 0 0 0 0 chromatin 0.43871859299551 0 0.27872348 0 hPsi_site_432 iPseU_CNN:0.27872348;iRNA_PseU:0 433 chr8 42401720 42401720 1 + T C COAD 42401720 + 42401700 42401740 41 TACTTGATAGTTATCCTTGTTAGCTTCGGTCTCTTCATGTA TACTTGATAGTTATCCTTGTCAGCTTCGGTCTCTTCATGTA Direct Loss 0.948444153545763 0 0.3567068 0 prediction 0.896888307091526 Functional Loss - SMIM19 ENSG00000176209 CDS Human protein_coding chr8:42401720 chr8:42401720 synonymous SNV . 0 21 hPsi_associated_SNPs_2392 0 0 1 0 1 Ribosome 0.43872617658408 0 0 0 hPsi_site_433 iPseU_CNN:0;iRNA_PseU:0 434 chr11 43602961 43602961 1 + T G UCEC 43602961 + 43602941 43602981 41 TTCTGCCCTTCGCGAATCTTTTTGCGGTCTGGGCTTGCTGT TTCTGCCCTTCGCGAATCTTGTTGCGGTCTGGGCTTGCTGT Direct Loss 0.948307899253411 0 0.6297695 0 prediction 0.896615798506822 Functional Loss - MIR129-2 ENSG00000199077 ncRNA_exonic Human miRNA chr11:43602961 chr11:43602961 . . 0 21 hPsi_associated_SNPs_2393 0 0 0 0 0 unknown 0.438718597281979 0 0.259539 0 hPsi_site_434 iPseU_CNN:0.259539;iRNA_PseU:0 435 chrX 134166693 134166693 1 + T A PRAD 134166693 + 134166673 134166713 41 AGAGCCCCCTCCTCAATGATTACCGGGGCTTTCTGGCCGAG AGAGCCCCCTCCTCAATGATAACCGGGGCTTTCTGGCCGAG Direct Loss 0.948303239650845 0 0.66222614 0 prediction 0.896606479301689 Functional Loss - RTL8C ENSG00000134590 CDS Human protein_coding chrX:134166693 chrX:134166693 nonsynonymous SNV 0.079 3 21 hPsi_associated_SNPs_2394 0 0 1 0 0 unknown 0.438718604821832 0 0.32445228 0 hPsi_site_435 iPseU_CNN:0.32445228;iRNA_PseU:0 436 chr14 20444116 20444116 1 + T A LUAD 20444116 + 20444096 20444136 41 TTTCCATGGCCTATGACCGTTATGTTGCTATATGCAAACCT TTTCCATGGCCTATGACCGTAATGTTGCTATATGCAAACCT Direct Loss 0.948298453646222 0 0.82722104 0 prediction 0.896596907292444 Functional Loss - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20444116 chr14:20444116 nonsynonymous SNV 0.852 4 21 hPsi_associated_SNPs_2395 0 0 0 0 0 unknown 0.437482842530928 0 0.65444208 0 hPsi_site_436 iPseU_CNN:0.65444208;iRNA_PseU:0 437 chr11 47594561 47594561 1 + A G COAD 47594561 - 47594541 47594581 41 GGATGCCAACACCTACAAGCTTGACCCTGCCACTTCAGCCG GGATGCCAACACCTACAAGCCTGACCCTGCCACTTCAGCCG Direct Loss 0.948270340849189 0 0.25417787 0 prediction 0.896540681698379 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594561 chr11:47594561 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2396 0 0 0 0 0 nucleus 0.438726314198144 0 0 0 hPsi_site_437 iPseU_CNN:0;iRNA_PseU:0 438 chr2 177054640 177054640 1 + T C OV 177054640 + 177054620 177054660 41 AAGAGTTTCATTTCAATAAGTACTTAACTCGAGCCCGGCGC AAGAGTTTCATTTCAATAAGCACTTAACTCGAGCCCGGCGC Direct Loss 0.948173919925127 0 0.6686274 0 prediction 0.896347839850254 Functional Loss - HOXD1 ENSG00000128645 CDS Human protein_coding chr2:177054640 chr2:177054640 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2397 0 0 0 2 0 exosome 0.438725202306069 0 0.3372548 0 hPsi_site_438 iPseU_CNN:0.3372548;iRNA_PseU:0 439 chr5 137419793 137419793 1 + T C LUAD 137419793 + 137419773 137419813 41 AGGGCGATGGGGAACCTGTTTATGCTCTGGGCAGCTCTGGG AGGGCGATGGGGAACCTGTTCATGCTCTGGGCAGCTCTGGG Direct Loss 0.948158078582627 0 0.44927365 0 prediction 0.896316157165254 Functional Loss - WNT8A ENSG00000061492 CDS Human protein_coding chr5:137419793 chr5:137419793 synonymous SNV . 0 21 hPsi_associated_SNPs_2398 0 0 0 0 1 exosome 0.438718592933685 0 0 0 hPsi_site_439 iPseU_CNN:0;iRNA_PseU:0 440 chr7 121943751 121943751 1 + A C SKCM 121943751 - 121943731 121943771 41 ATCGCGTTCAAAACCTCGGATTTCAGCCGAGGCTCTCCTAA ATCGCGTTCAAAACCTCGGAGTTCAGCCGAGGCTCTCCTAA Direct Loss 0.947997800369621 0 0.5895733 0 prediction 0.895995600739241 Functional Loss - FEZF1 ENSG00000128610 CDS Human protein_coding chr7:121943751 chr7:121943751 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_2399 0 0 0 0 0 exosome 0.438718597965257 0 0.1791466 0 hPsi_site_440 iPseU_CNN:0.1791466;iRNA_PseU:0 441 chr15 34355478 34355478 1 + T C UCEC 34355478 + 34355458 34355498 41 GGATGAGTGCCAGATCCAGTTTCTCTCTGAGCCCACCATCA GGATGAGTGCCAGATCCAGTCTCTCTCTGAGCCCACCATCA Direct Loss 0.947916089484775 0 0.5438213 0 prediction 0.89583217896955 Functional Loss - CHRM5 ENSG00000184984 CDS Human protein_coding chr15:34355478 chr15:34355478 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2400 0 0 0 0 0 cytosol 0.43208445528239 0 0.0876425999999999 0 hPsi_site_441 iPseU_CNN:0.0876425999999999;iRNA_PseU:0 442 chr12 53647598 53647598 1 + T G UCEC 53647598 + 53647578 53647618 41 TCATCGTCGTCTTCTCTCTCTTCATGTTGACTTTCTCTACC TCATCGTCGTCTTCTCTCTCGTCATGTTGACTTTCTCTACC Direct Loss 0.947799449141826 0 0.45920223 0 prediction 0.895598898283651 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647598 chr12:53647598 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2401 0 0 1 0 0 Endoplasmic reticulum 0.43928119674708 0 0 0 hPsi_site_442 iPseU_CNN:0;iRNA_PseU:0 443 chr1 71512591 71512591 1 + T A COAD 71512591 + 71512571 71512611 41 GAAGAAAAGGTTGCCCCAGTTATGCGAAGAGCTAGTCCCGT GAAGAAAAGGTTGCCCCAGTAATGCGAAGAGCTAGTCCCGT Direct Loss 0.947712828055861 0 0.6250279 0 prediction 0.895425656111722 Functional Loss - PTGER3 ENSG00000050628 CDS Human protein_coding chr1:71512591 chr1:71512591 nonsynonymous SNV 0.081 2 21 hPsi_associated_SNPs_2402 0 0 0 0 0 Endoplasmic reticulum 0.438721634033895 0 0.2500558 0 hPsi_site_443 iPseU_CNN:0.2500558;iRNA_PseU:0 444 chr19 37975965 37975965 1 + T C UCEC 37975965 + 37975945 37975985 41 TTTGTGGAAAGGCTTTTAGTTACTGTGGATCCCTTGCCCAA TTTGTGGAAAGGCTTTTAGTCACTGTGGATCCCTTGCCCAA Direct Loss 0.947679281949264 0 0.85754293 0 prediction 0.895358563898527 Functional Loss - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37975965 chr19:37975965 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_2403 0 0 1 0 0 exosome 0.4394304169622 0 0.71508586 0 hPsi_site_444 iPseU_CNN:0.71508586;iRNA_PseU:0 445 chr1 110882778 110882778 1 + T C UCEC 110882778 + 110882758 110882798 41 CTCTGAAGATAGAAGCTGTGTATGTGAGCCGGCGCCGCAGC CTCTGAAGATAGAAGCTGTGCATGTGAGCCGGCGCCGCAGC Direct Loss 0.947651452646497 0 0.5710118 0 prediction 0.895302905292993 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882778 chr1:110882778 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2404 0 0 1 0 0 Nucleus 0.425756638944849 0 0.1420236 0 hPsi_site_445 iPseU_CNN:0.1420236;iRNA_PseU:0 446 chr20 18139841 18139841 1 + T C SKCM 18139841 + 18139821 18139861 41 GCCAGGATGGTGGAAACTTGTTCATAACAAGCCCCCAACGA GCCAGGATGGTGGAAACTTGCTCATAACAAGCCCCCAACGA Direct Loss 0.94761520458769 0 0.60366905 0 prediction 0.89523040917538 Functional Loss - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18139841 chr20:18139841 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2405 0 0 0 0 1 Nucleus 0.438720744166012 0 0.2073381 0 hPsi_site_446 iPseU_CNN:0.2073381;iRNA_PseU:0 447 chr1 32092409 32092409 1 + T C BLCA 32092409 + 32092389 32092429 41 AGGCAAATTCCGGGAGCAGTTTAAGGCTGCCTTCTCCTGCT AGGCAAATTCCGGGAGCAGTCTAAGGCTGCCTTCTCCTGCT Direct Loss 0.947604274964087 0 0.8177017 0 prediction 0.895208549928173 Functional Loss - HCRTR1 ENSG00000121764 CDS Human protein_coding chr1:32092409 chr1:32092409 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2406 0 0 0 0 1 Endoplasmic reticulum 0.438718593243683 0 0.6354034 0 hPsi_site_447 iPseU_CNN:0.6354034;iRNA_PseU:0 448 chr16 5134791 5134791 1 + A C GBM 5134791 - 5134771 5134811 41 GCAGGTTCTTCCGGAACTGGTTTAGCTTGCCCGCAGGATCA GCAGGTTCTTCCGGAACTGGGTTAGCTTGCCCGCAGGATCA Direct Loss 0.947390126122546 0 0.6647875 0 prediction 0.894780252245093 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5134791 chr16:5134791 nonsynonymous SNV 0.025 0 21 hPsi_associated_SNPs_2407 0 0 0 0 0 Ribosome 0.438718592995102 0 0.329575 0 hPsi_site_448 iPseU_CNN:0.329575;iRNA_PseU:0 449 chr2 187360010 187360010 1 + T G UCEC 187360010 + 187359990 187360030 41 GGAGCAAAGCAACAGAAGTTTATCAAGGCTGTCACACATCA GGAGCAAAGCAACAGAAGTTGATCAAGGCTGTCACACATCA Direct Loss 0.947369167617216 0 0.6725442 0 prediction 0.894738335234432 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187360010 chr2:187360010 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2408 0 0 1 0 2 Ribosome 0.439137883191774 0 0.3450884 0 hPsi_site_449 iPseU_CNN:0.3450884;iRNA_PseU:0 450 chr20 62340443 62340443 1 + T C UCEC 62340443 + 62340423 62340463 41 GTGTCCGTGTGCTTTACCTGTACCCCACTCACAAGTCTCTG GTGTCCGTGTGCTTTACCTGCACCCCACTCACAAGTCTCTG Direct Loss 0.947308354287854 0 0.7855964 0 prediction 0.894616708575707 Functional Loss - ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62340443 chr20:62340443 nonsynonymous SNV 0.960 1 21 hPsi_associated_SNPs_2409 0 0 1 0 1 chromatin 0.438718556743325 0 0.5711928 0 hPsi_site_450 iPseU_CNN:0.5711928;iRNA_PseU:0 451 chr1 158450094 158450094 1 + T A COAD 158450094 + 158450074 158450114 41 GTGTGATGGGTTATGATCGCTATGCTGCCATTTGTCACCCT GTGTGATGGGTTATGATCGCAATGCTGCCATTTGTCACCCT Direct Loss 0.947267109059021 0 0.77142465 0 prediction 0.894534218118042 Functional Loss - OR10R2 ENSG00000198965 CDS Human protein_coding chr1:158450094 chr1:158450094 nonsynonymous SNV 0.421 3 21 hPsi_associated_SNPs_2410 0 0 0 0 0 unknown 0.437226277025805 0 0.5428493 0 hPsi_site_451 iPseU_CNN:0.5428493;iRNA_PseU:0 452 chr16 31477585 31477585 1 + T A OV 31477585 + 31477565 31477605 41 ACAGGCAGTCCCCATGGACCTAGACTCACCTTCCCCTTGCC ACAGGCAGTCCCCATGGACCAAGACTCACCTTCCCCTTGCC Direct Loss 0.947262938354746 0 0.3410483 0 prediction 0.894525876709491 Functional Loss - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31477585 chr16:31477585 nonsynonymous SNV 0.070 1 21 hPsi_associated_SNPs_2411 0 0 1 0 0 cytosol 0.438682774859588 0 0 0 hPsi_site_452 iPseU_CNN:0;iRNA_PseU:0 453 chr20 18297193 18297193 1 + T A rs1050476 18297193 + 18297173 18297213 41 GGCAATAAGTCAGCTCTAATTACACACAAGCGGGCTCACTC GGCAATAAGTCAGCTCTAATAACACACAAGCGGGCTCACTC Direct Loss 0.947229636754225 0 0.6818601 0 prediction 0.89445927350845 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18297193 chr20:18297193 synonymous SNV . 0 21 hPsi_associated_SNPs_2412 0 0 1 0 0 Cytosol 0.446604413415963 0 0.3637202 0 hPsi_site_453 iPseU_CNN:0.3637202;iRNA_PseU:0 454 chr6 26240870 26240870 1 + T A CESC 26240870 + 26240850 26240890 41 TGATACGGGACGCCGTAACCTACACGGAGCACGCCAAGCGT TGATACGGGACGCCGTAACCAACACGGAGCACGCCAAGCGT Direct Loss 0.947227117095837 0 0.36452177 0 prediction 0.894454234191674 Functional Loss - HIST1H4F ENSG00000198327 CDS Human other chr6:26240870 chr6:26240870 nonsynonymous SNV 0.851 1 21 hPsi_associated_SNPs_2413 0 0 0 0 0 exosome 0.43867721177498 0 0 0 hPsi_site_454 iPseU_CNN:0;iRNA_PseU:0 455 chr16 2821021 2821021 1 + T C rs539949164 2821021 + 2821001 2821041 41 CCTTTCCCTCCCCTTTTTTTTTTCTTTGTTCCTGTGAAATG CCTTTCCCTCCCCTTTTTTTCTTCTTTGTTCCTGTGAAATG Direct Loss 0.947194633427444 0 0.31471032 0 prediction 0.894389266854889 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2821021 chr16:2821021 nonsynonymous SNV 0.975 0 21 hPsi_associated_SNPs_2414 0 0 1 5 0 Nucleus 0.438717802477298 0 0 0 hPsi_site_455 iPseU_CNN:0;iRNA_PseU:0 456 chr21 46066867 46066867 1 + T G COAD 46066867 + 46066847 46066887 41 GTGTCCACCTGCTCTGAGGATTCCTCTTCATGCTGCCAGCA GTGTCCACCTGCTCTGAGGAGTCCTCTTCATGCTGCCAGCA Direct Loss 0.947029241014402 0 0.68201196 0 prediction 0.894058482028804 Functional Loss - KRTAP10-11 ENSG00000243489 CDS Human protein_coding chr21:46066867 chr21:46066867 nonsynonymous SNV 0.034 0 21 hPsi_associated_SNPs_2415 0 0 0 0 0 unknown 0.438763946099702 0 0.36402392 0 hPsi_site_456 iPseU_CNN:0.36402392;iRNA_PseU:0 457 chr11 66613459 66613459 1 + T C LUAD 66613459 + 66613439 66613479 41 ATGCCCTGGGTGTGGGACTCTTCCTGCTTCTGCTCCAGCCC ATGCCCTGGGTGTGGGACTCCTCCTGCTTCTGCTCCAGCCC Direct Loss 0.947016866101329 0 0.8154209 0 prediction 0.894033732202659 Functional Loss - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66613459 chr11:66613459 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2416 0 0 1 0 0 Ribosome 0.438277813208146 0 0.6308418 0 hPsi_site_457 iPseU_CNN:0.6308418;iRNA_PseU:0 458 chr6 123319030 123319030 1 + T C OV 123319030 + 123319010 123319050 41 GACATCCAGGAGGTGAGGGATATGGTCATCACCAGGCCGGA GACATCCAGGAGGTGAGGGACATGGTCATCACCAGGCCGGA Direct Loss 0.946986489568103 0 0.65249467 0 prediction 0.893972979136207 Functional Loss - CLVS2 ENSG00000146352 CDS Human protein_coding chr6:123319030 chr6:123319030 synonymous SNV . 0 21 hPsi_associated_SNPs_2417 0 0 0 0 0 exosome 0.438718958503793 0 0.30498934 0 hPsi_site_458 iPseU_CNN:0.30498934;iRNA_PseU:0 459 chr1 114442687 114442687 1 + A C COAD 114442687 - 114442667 114442707 41 TAGCAGCCACTACAAAAAGTTTTTTTGCTCCTACTCGGAGC TAGCAGCCACTACAAAAAGTGTTTTTGCTCCTACTCGGAGC Direct Loss 0.946985353560683 0 0.35130775 0 prediction 0.893970707121367 Functional Loss - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442687 chr1:114442687 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2418 0 0 1 0 0 chromatin 0.43871338038127 0 0 0 hPsi_site_459 iPseU_CNN:0;iRNA_PseU:0 460 chr1 248309276 248309276 1 + T C LUSC 248309276 + 248309256 248309296 41 GCAGGACAAGCTGGTGTCTGTATTCTACACCATCCTCACTC GCAGGACAAGCTGGTGTCTGCATTCTACACCATCCTCACTC Direct Loss 0.946849079653091 0 0.7719512 0 prediction 0.893698159306182 Functional Loss - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248309276 chr1:248309276 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_2419 0 0 0 0 0 unknown 0.438656770111527 0 0.5439024 0 hPsi_site_460 iPseU_CNN:0.5439024;iRNA_PseU:0 461 chr3 180322316 180322316 1 + T C STAD 180322316 + 180322296 180322336 41 AAAAGCTAGCAGTATCTCTGTATAGCTCTTCTCTTCCACCA AAAAGCTAGCAGTATCTCTGCATAGCTCTTCTCTTCCACCA Direct Loss 0.946707169374401 0 0.62606776 0 prediction 0.893414338748802 Functional Loss - TTC14 ENSG00000163728 CDS Human protein_coding chr3:180322316 chr3:180322316 nonsynonymous SNV 0.952 1 21 hPsi_associated_SNPs_2420 0 0 1 0 2 Endoplasmic reticulum 0.438707257863219 0 0.25213552 0 hPsi_site_461 iPseU_CNN:0.25213552;iRNA_PseU:0 462 chr12 56628638 56628638 1 + T G UCEC 56628638 + 56628618 56628658 41 GCTCCCAGCTGCTGGTCAATTTTGGCTTGAGCCCCGCTGCT GCTCCCAGCTGCTGGTCAATGTTGGCTTGAGCCCCGCTGCT Direct Loss 0.946698543148994 0 0.76939285 0 prediction 0.893397086297989 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56628638 chr12:56628638 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_2421 0 0 1 0 0 cytosol 0.43872005145256 0 0.5387857 0 hPsi_site_462 iPseU_CNN:0.5387857;iRNA_PseU:0 463 chr6 83905471 83905471 1 + T A BRCA 83905471 + 83905451 83905491 41 TGATCCAGGTGAGCTCTGTGTATGTGCAGCAATCCAGTGGC TGATCCAGGTGAGCTCTGTGAATGTGCAGCAATCCAGTGGC Direct Loss 0.946684579077745 0 0.45793396 0 prediction 0.893369158155491 Functional Loss - RWDD2A ENSG00000013392 CDS Human protein_coding chr6:83905471 chr6:83905471 nonsynonymous SNV 0.577 1 21 hPsi_associated_SNPs_2422 0 0 1 0 0 Cytosol 0.431668189418534 0 0 0 hPsi_site_463 iPseU_CNN:0;iRNA_PseU:0 464 chr7 150710907 150710907 1 + T C rs3918211 150710907 + 150710887 150710927 41 ATGTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCT ATGTTTGTCTGCGGCGATGTCACCATGGCAACCAACGTCCT Direct Loss 0.946682068039876 0 0.6117943 0 prediction 0.893364136079753 Functional Loss - NOS3 ENSG00000164867 CDS Human protein_coding chr7:150710907 chr7:150710907 synonymous SNV . 0 21 hPsi_associated_SNPs_2423 1 0 0 0 2 chromatin 0.431696140425315 0 0.2235886 0 hPsi_site_464 iPseU_CNN:0.2235886;iRNA_PseU:0 465 chr9 38397069 38397069 1 + T C KIRP 38397069 + 38397049 38397089 41 AGAGGGCCAACAACACCAGGTATGGCCTGGCTGCGGCTGTG AGAGGGCCAACAACACCAGGCATGGCCTGGCTGCGGCTGTG Direct Loss 0.946680658642044 0 0.49012613 0 prediction 0.893361317284088 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38397069 chr9:38397069 nonsynonymous SNV 0.988 5 21 hPsi_associated_SNPs_2424 0 0 1 0 0 Cytosol 0.438717503224413 0 0 0 hPsi_site_465 iPseU_CNN:0;iRNA_PseU:0 466 chr7 142749798 142749798 1 + T A LUAD 142749798 + 142749778 142749818 41 CAGACATGGCCCTTGATCGCTTTGTGGCCATCTGCCACCCA CAGACATGGCCCTTGATCGCATTGTGGCCATCTGCCACCCA Direct Loss 0.946648604332671 0 0.87777746 0 prediction 0.893297208665341 Functional Loss - OR6V1 ENSG00000225781 CDS Human protein_coding chr7:142749798 chr7:142749798 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2425 0 0 0 0 0 unknown 0.439013174304597 0 0.75555492 0 hPsi_site_466 iPseU_CNN:0.75555492;iRNA_PseU:0 467 chrX 281519 281519 1 + T G rs183830346 281519 + 281499 281539 41 GCCTGCGCGTTTGTGTAAATTAACCTCCCTTTTTAGTTCTG GCCTGCGCGTTTGTGTAAATGAACCTCCCTTTTTAGTTCTG Direct Loss 0.94664687266838 0 0.49872383 0 prediction 0.89329374533676 Functional Loss - LINC00685 ENSG00000226179 upstream Human antisense chrX:281519 chrX:281519 . . 0 21 hPsi_associated_SNPs_2426 0 0 0 0 0 unknown 0.43873410362589 0 0 0 hPsi_site_467 iPseU_CNN:0;iRNA_PseU:0 468 chr11 779969 779969 1 + T C rs569259819 779969 + 779949 779989 41 GGGTGCTTCCAGGGTACTGCTATCTCCCCCGCTCCAAGAGG GGGTGCTTCCAGGGTACTGCCATCTCCCCCGCTCCAAGAGG Direct Loss 0.946623009106573 0 0.40792257 0 prediction 0.893246018213146 Functional Loss - LOC171391 ENSG00000255284 intronic Human lincRNA chr11:779969 chr11:779969 . . 0 21 hPsi_associated_SNPs_2427 0 0 1 0 0 unknown 0.438718592995688 0 0 0 hPsi_site_468 iPseU_CNN:0;iRNA_PseU:0 469 chr12 13028539 13028539 1 + T C rs28493723 13028539 + 13028519 13028559 41 GGGCCGGAAGGTGGTGGTTGTATGCTGTGAAGGCATCAACA GGGCCGGAAGGTGGTGGTTGCATGCTGTGAAGGCATCAACA Direct Loss 0.946613058437554 0 0.31248695 0 prediction 0.893226116875109 Functional Loss - RPL13AP20 ENSG00000234498 ncRNA_exonic Human processed_pseudogene chr12:13028539 chr12:13028539 . . 0 21 hPsi_associated_SNPs_2428 0 0 0 0 0 unknown 0.440700864876986 0 0 0 hPsi_site_469 iPseU_CNN:0;iRNA_PseU:0 470 chr11 68700900 68700900 1 + T C COAD 68700900 + 68700880 68700920 41 GCTGGGCCTCAGACACCATGTACCTTGGGCAGCTCACAGCC GCTGGGCCTCAGACACCATGCACCTTGGGCAGCTCACAGCC Direct Loss 0.946508296956641 0 0.7268964 0 prediction 0.893016593913282 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68700900 chr11:68700900 nonsynonymous SNV 0.864 5 21 hPsi_associated_SNPs_2429 0 0 0 0 1 chromatin 0.440536628714174 0 0.4537928 0 hPsi_site_470 iPseU_CNN:0.4537928;iRNA_PseU:0 471 chrX 27766554 27766554 1 + T C SKCM 27766554 + 27766534 27766574 41 CTAAAGGGGAGCAGAGAAGGTACAATAAACTGTCTTGAACC CTAAAGGGGAGCAGAGAAGGCACAATAAACTGTCTTGAACC Direct Loss 0.946501821253343 0 0.7899254 0 prediction 0.893003642506685 Functional Loss - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27766554 chrX:27766554 synonymous SNV . 0 21 hPsi_associated_SNPs_2430 0 0 0 0 0 exosome 0.438718596587746 0 0.5798508 0 hPsi_site_471 iPseU_CNN:0.5798508;iRNA_PseU:0 472 chr3 48508471 48508471 1 + T C rs561010257 48508471 + 48508451 48508491 41 CTGCTCCAAGCAGAGCTGGCTATGCTGGGCCTCACCAGTGC CTGCTCCAAGCAGAGCTGGCCATGCTGGGCCTCACCAGTGC Direct Loss 0.946501820133499 0 0.52144206 0 prediction 0.893003640266998 Functional Loss - TREX1 ENSG00000213689 CDS Human protein_coding chr3:48508471 chr3:48508471 synonymous SNV . 0 21 hPsi_associated_SNPs_2431 0 0 0 0 0 Ribosome 0.438641580643571 0 0.0428841200000001 0 hPsi_site_472 iPseU_CNN:0.0428841200000001;iRNA_PseU:0 473 chr5 148687097 148687097 1 + T C UCEC 148687097 + 148687077 148687117 41 CCTGGTGAGGGAATGCAGGATATGTGCCTTCCTGCTGCGGA CCTGGTGAGGGAATGCAGGACATGTGCCTTCCTGCTGCGGA Direct Loss 0.946484632900313 0 0.9191302 0 prediction 0.892969265800625 Functional Loss - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148687097 chr5:148687097 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_2432 0 0 0 0 1 exosome 0.43874666235625 0 0.8382604 0 hPsi_site_473 iPseU_CNN:0.8382604;iRNA_PseU:0 474 chr14 24838784 24838784 1 + T C UCEC 24838784 + 24838764 24838804 41 TATGGCGCTGCACCTATCGGTATTCCCCGACCTCCACCCCC TATGGCGCTGCACCTATCGGCATTCCCCGACCTCCACCCCC Direct Loss 0.946461208300594 0 0.9170082 0 prediction 0.892922416601188 Functional Loss - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24838784 chr14:24838784 synonymous SNV . 0 21 hPsi_associated_SNPs_2433 0 0 1 0 2 cytosol 0.438718593023491 0 0.8340164 0 hPsi_site_474 iPseU_CNN:0.8340164;iRNA_PseU:0 475 chrX 56590499 56590499 1 + T G COAD 56590499 + 56590479 56590519 41 AGGAAGCGATTTCGAAACGCTTCAAATCCCAAACCGATCAG AGGAAGCGATTTCGAAACGCGTCAAATCCCAAACCGATCAG Direct Loss 0.946443281366701 0 0.8611648 0 prediction 0.892886562733403 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590499 chrX:56590499 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2434 0 0 1 0 0 nucleus 0.438719687770733 0 0.7223296 0 hPsi_site_475 iPseU_CNN:0.7223296;iRNA_PseU:0 476 chr22 25023914 25023914 1 + T C MESO 25023914 + 25023894 25023934 41 CATCACCAACGAGTTTGGGGTACCCCCCTCACCTGCCAATT CATCACCAACGAGTTTGGGGCACCCCCCTCACCTGCCAATT Direct Loss 0.946325178815811 0 0.7542856 0 prediction 0.892650357631622 Functional Loss - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25023914 chr22:25023914 nonsynonymous SNV 0.445 0 21 hPsi_associated_SNPs_2435 0 0 0 0 2 exosome 0.438718592432384 0 0.5085712 0 hPsi_site_476 iPseU_CNN:0.5085712;iRNA_PseU:0 477 chr7 134221871 134221871 1 + T A LUAD 134221871 + 134221851 134221891 41 CACTCCAAGGGCATCACCGTTACGGCCTACAGCCCCCTGGG CACTCCAAGGGCATCACCGTAACGGCCTACAGCCCCCTGGG Direct Loss 0.946317858845144 0 0.7839093 0 prediction 0.892635717690289 Functional Loss - AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134221871 chr7:134221871 synonymous SNV . 0 21 hPsi_associated_SNPs_2436 0 0 0 0 2 exosome 0.43871899374242 0 0.5678186 0 hPsi_site_477 iPseU_CNN:0.5678186;iRNA_PseU:0 478 chr9 91616344 91616344 1 + T C LUAD 91616344 + 91616324 91616364 41 TTCACAACCGCATGTACTTTTTCATTGGCAACCTGGCTCTC TTCACAACCGCATGTACTTTCTCATTGGCAACCTGGCTCTC Direct Loss 0.946184702204123 0 0.5152188 0 prediction 0.892369404408245 Functional Loss - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616344 chr9:91616344 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2437 0 0 0 0 0 cytosol 0.438723942958004 0 0.0304376 0 hPsi_site_478 iPseU_CNN:0.0304376;iRNA_PseU:0 479 chr17 7606100 7606100 1 + T G SKCM 7606100 + 7606080 7606120 41 GGGATCTCCGGCAGTCTGGTTACCCACTGTGGTCCCTGGGT GGGATCTCCGGCAGTCTGGTGACCCACTGTGGTCCCTGGGT Direct Loss 0.946151947789089 0 0.77874035 0 prediction 0.892303895578179 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606100 chr17:7606100 nonsynonymous SNV 0.605 0 21 hPsi_associated_SNPs_2438 0 0 1 0 2 Ribosome 0.43924882964825 0 0.5574807 0 hPsi_site_479 iPseU_CNN:0.5574807;iRNA_PseU:0 480 chr1 158450441 158450441 1 + T A SKCM 158450441 + 158450421 158450461 41 GAGGGCAGACGGAAAGCGTTTTCCACCTGCGCCTCTCACCT GAGGGCAGACGGAAAGCGTTATCCACCTGCGCCTCTCACCT Direct Loss 0.946132328982505 0 0.81228864 0 prediction 0.892264657965011 Functional Loss - OR10R2 ENSG00000198965 CDS Human protein_coding chr1:158450441 chr1:158450441 nonsynonymous SNV 0.698 3 21 hPsi_associated_SNPs_2439 0 0 0 0 0 unknown 0.438715975610162 0 0.62457728 0 hPsi_site_480 iPseU_CNN:0.62457728;iRNA_PseU:0 481 chr19 42365214 42365214 1 + T C UCEC 42365214 + 42365194 42365234 41 AAAGTCCCCGAATGGGTGGATACCGTCAAGCTGGCCAAGCA AAAGTCCCCGAATGGGTGGACACCGTCAAGCTGGCCAAGCA Direct Loss 0.946106173450689 0 0.680983 0 prediction 0.892212346901378 Functional Loss - RPS19 ENSG00000105372 CDS Human protein_coding chr19:42365214 chr19:42365214 synonymous SNV . 0 21 hPsi_associated_SNPs_2440 0 0 1 0 2 Cytosol 0.438741612244597 0 0.361966 0 hPsi_site_481 iPseU_CNN:0.361966;iRNA_PseU:0 482 chr1 248343722 248343722 1 + T C UCEC 248343722 + 248343702 248343742 41 AAAATTTGTGGACTTATGGCTACCTTCTCCTGGATCCTGGG AAAATTTGTGGACTTATGGCCACCTTCTCCTGGATCCTGGG Direct Loss 0.946105153945266 0 0.42266148 0 prediction 0.892210307890532 Functional Loss - OR2M2 ENSG00000198601 CDS Human protein_coding chr1:248343722 chr1:248343722 synonymous SNV . 0 21 hPsi_associated_SNPs_2441 0 0 0 0 0 exosome 0.438718592795794 0 0 0 hPsi_site_482 iPseU_CNN:0;iRNA_PseU:0 483 chr2 46808671 46808671 1 + A G STAD 46808671 - 46808651 46808691 41 TACGTGGCTGGCCTTGTTATTTCACCACTCTGGATATACTG TACGTGGCTGGCCTTGTTATCTCACCACTCTGGATATACTG Direct Loss 0.946098573669797 0 0.32696745 0 prediction 0.892197147339594 Functional Loss - PIGF ENSG00000151665 CDS Human protein_coding chr2:46808671 chr2:46808671 synonymous SNV . 0 21 hPsi_associated_SNPs_2442 0 0 1 2 1 Ribosome 0.438620958464811 0 0 0 hPsi_site_483 iPseU_CNN:0;iRNA_PseU:0 484 chr12 130647640 130647640 1 + T C STAD 130647640 + 130647620 130647660 41 ATCGGCTACAACATGACTCGTATGCCCAACCTGATGGGCCA ATCGGCTACAACATGACTCGCATGCCCAACCTGATGGGCCA Direct Loss 0.946090105988693 0 0.52211434 0 prediction 0.892180211977386 Functional Loss - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130647640 chr12:130647640 nonsynonymous SNV 0.989 0 21 hPsi_associated_SNPs_2443 0 0 0 0 0 exosome 0.43874118505607 0 0.04422868 0 hPsi_site_484 iPseU_CNN:0.04422868;iRNA_PseU:0 485 chr6 35755721 35755721 1 + T C SKCM 35755721 + 35755701 35755741 41 TCAAAGAATGAGAAATGGCTTAGCATCGCCTATGGCCGTTG TCAAAGAATGAGAAATGGCTCAGCATCGCCTATGGCCGTTG Direct Loss 0.946079984211332 0 0.48555878 0 prediction 0.892159968422664 Functional Loss - CLPSL1 ENSG00000204140 CDS Human protein_coding chr6:35755721 chr6:35755721 synonymous SNV . 0 21 hPsi_associated_SNPs_2444 0 0 0 0 1 unknown 0.438719764432906 0 0 0 hPsi_site_485 iPseU_CNN:0;iRNA_PseU:0 486 chr6 26022093 26022093 1 + T C CESC 26022093 + 26022073 26022113 41 GCGGGGTGCTCAAGGTGTTTTTGGAGAACGTGATCCGTGAC GCGGGGTGCTCAAGGTGTTTCTGGAGAACGTGATCCGTGAC Direct Loss 0.946037062185128 0 0.46274194 0 prediction 0.892074124370255 Functional Loss - HIST1H4A ENSG00000196176 CDS Human other chr6:26022093 chr6:26022093 synonymous SNV . 0 21 hPsi_associated_SNPs_2445 0 0 1 0 0 exosome 0.438598537658719 0 0 0 hPsi_site_486 iPseU_CNN:0;iRNA_PseU:0 487 chr11 309109 309109 1 + T C CESC 309109 + 309089 309129 41 GGGCCCTGATTTTGGGCATCTTCATGACCATTCTGCTCATC GGGCCCTGATTTTGGGCATCCTCATGACCATTCTGCTCATC Direct Loss 0.945964902267519 0 0.47208276 0 prediction 0.891929804535038 Functional Loss - IFITM2 ENSG00000185201 CDS Human protein_coding chr11:309109 chr11:309109 nonsynonymous SNV 0.004 1 21 hPsi_associated_SNPs_2446 0 0 1 0 1 Endoplasmic reticulum 0.439102041182914 0 0 0 hPsi_site_487 iPseU_CNN:0;iRNA_PseU:0 488 chr14 58701147 58701147 1 + T C SARC 58701147 + 58701127 58701167 41 GTTCTGTTTCAAAGGAATATTATAATCAGACGGGCCGTATA GTTCTGTTTCAAAGGAATATCATAATCAGACGGGCCGTATA Direct Loss 0.945959299765543 0 0.23280156 0 prediction 0.891918599531086 Functional Loss - ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58701147 chr14:58701147 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2447 0 0 1 2 1 Ribosome 0.438937924420514 0 0 0 hPsi_site_488 iPseU_CNN:0;iRNA_PseU:0 489 chr2 86831421 86831421 1 + T C CHOL 86831421 + 86831401 86831441 41 ACTTTCCGAGTCATTTTCAGTATCTTGAGACCCCTCCGACA ACTTTCCGAGTCATTTTCAGCATCTTGAGACCCCTCCGACA Direct Loss 0.945801329650328 0 0.4851561 0 prediction 0.891602659300656 Functional Loss - RNF103 ENSG00000239305 CDS Human protein_coding chr2:86831421 chr2:86831421 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2448 0 0 0 0 1 Ribosome 0.438668766148755 0 0 0 hPsi_site_489 iPseU_CNN:0;iRNA_PseU:0 490 chr10 104160083 104160083 1 + T C LGG 104160083 + 104160063 104160103 41 GGCAGACGAGTGTGGTGAGCTTTCTGCTGCGGGTAGGTGCA GGCAGACGAGTGTGGTGAGCCTTCTGCTGCGGGTAGGTGCA Direct Loss 0.945788512062418 0 0.6675397 0 prediction 0.891577024124835 Functional Loss - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160083 chr10:104160083 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_2449 0 0 1 0 1 chromatin 0.438718024901306 0 0.3350794 0 hPsi_site_490 iPseU_CNN:0.3350794;iRNA_PseU:0 491 chr3 9962221 9962221 1 + T C ESCA 9962221 + 9962201 9962241 41 GGCTGCCCTAGGGAGTGAGGTACGAATCTGGTCCTATACTC GGCTGCCCTAGGGAGTGAGGCACGAATCTGGTCCTATACTC Direct Loss 0.945759644496523 0 0.77063453 0 prediction 0.891519288993046 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9962221 chr3:9962221 nonsynonymous SNV 0.202 3 21 hPsi_associated_SNPs_2450 0 0 1 0 2 Ribosome 0.438718592021177 0 0.54126906 0 hPsi_site_491 iPseU_CNN:0.54126906;iRNA_PseU:0 492 chr7 6628308 6628308 1 + T A COAD 6628308 + 6628288 6628328 41 GCTTTGTCGTGGTTCTGAGCTTCCTCCTGGGTGGCTACCTG GCTTTGTCGTGGTTCTGAGCATCCTCCTGGGTGGCTACCTG Direct Loss 0.945742345197082 0 0.6440666 0 prediction 0.891484690394164 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628308 chr7:6628308 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_2451 0 0 1 0 1 Cytosol 0.438718593613311 0 0.2881332 0 hPsi_site_492 iPseU_CNN:0.2881332;iRNA_PseU:0 493 chr7 138239657 138239657 1 + T C SKCM 138239657 + 138239637 138239677 41 CGGAGGCCAGCACCTGTGGGTTTACCAAACCCTAGAATGCA CGGAGGCCAGCACCTGTGGGCTTACCAAACCCTAGAATGCA Direct Loss 0.945712000058252 0 0.6711069 0 prediction 0.891424000116504 Functional Loss - TRIM24 ENSG00000122779 CDS Human protein_coding chr7:138239657 chr7:138239657 synonymous SNV . 0 21 hPsi_associated_SNPs_2452 0 0 1 0 1 Cytosol 0.438715278351765 0 0.3422138 0 hPsi_site_493 iPseU_CNN:0.3422138;iRNA_PseU:0 494 chr11 55419009 55419009 1 + T A LUAD 55419009 + 55418989 55419029 41 ATTGCTCTGGGGAGTTTTGTTATCTTGCTAATCTCCTACAG ATTGCTCTGGGGAGTTTTGTAATCTTGCTAATCTCCTACAG Direct Loss 0.945706496103246 0 0.68592656 0 prediction 0.891412992206492 Functional Loss - OR4S2 ENSG00000174982 CDS Human protein_coding chr11:55419009 chr11:55419009 synonymous SNV . 0 21 hPsi_associated_SNPs_2453 0 0 0 0 0 unknown 0.438718589849281 0 0.37185312 0 hPsi_site_494 iPseU_CNN:0.37185312;iRNA_PseU:0 495 chr18 56807231 56807231 1 + T C rs28392733 56807231 + 56807211 56807251 41 CTCCCCGCGTCCGGCTTGGATATCTTCGGGGACCTGAAGAA CTCCCCGCGTCCGGCTTGGACATCTTCGGGGACCTGAAGAA Direct Loss 0.945696860307817 0 0.53196794 0 prediction 0.891393720615634 Functional Loss - SEC11C ENSG00000166562 CDS Human protein_coding chr18:56807231 chr18:56807231 synonymous SNV . 0 21 hPsi_associated_SNPs_2454 0 0 1 0 2 Ribosome 0.438718592995102 0 0.0639358800000001 0 hPsi_site_495 iPseU_CNN:0.0639358800000001;iRNA_PseU:0 496 chr19 54966185 54966185 1 + T C STAD 54966185 + 54966165 54966205 41 CAGAAGCGACCCTTTGCTGTTACCACCCAGAGCTTTGGCTC CAGAAGCGACCCTTTGCTGTCACCACCCAGAGCTTTGGCTC Direct Loss 0.945671533992302 0 0.9283701 0 prediction 0.891343067984603 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54966185 chr19:54966185 synonymous SNV . 0 21 hPsi_associated_SNPs_2455 0 0 1 0 2 chromatin 0.439140020022459 0 0.8567402 0 hPsi_site_496 iPseU_CNN:0.8567402;iRNA_PseU:0 497 chr8 11189510 11189510 1 + T C LUSC 11189510 + 11189490 11189530 41 TGGCCCTTATACTGCAGTATTATATGCTCCATGAGACTGTG TGGCCCTTATACTGCAGTATCATATGCTCCATGAGACTGTG Direct Loss 0.945636738084111 0 0.31160802 0 prediction 0.891273476168222 Functional Loss - SLC35G5 ENSG00000177710 CDS Human protein_coding chr8:11189510 chr8:11189510 nonsynonymous SNV 0.075 0 21 hPsi_associated_SNPs_2456 0 0 0 0 0 exosome 0.437082071375588 0 0 0 hPsi_site_497 iPseU_CNN:0;iRNA_PseU:0 498 chr19 12902643 12902643 1 + T C COAD 12902643 + 12902623 12902663 41 ACTCATACACAGCTACGGGATACGGCCGGGCCCCTGGTGGC ACTCATACACAGCTACGGGACACGGCCGGGCCCCTGGTGGC Direct Loss 0.945598241922811 0 0.8901355 0 prediction 0.891196483845622 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12902643 chr19:12902643 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2457 0 0 1 0 0 Cytosol 0.438777738941986 0 0.780271 0 hPsi_site_498 iPseU_CNN:0.780271;iRNA_PseU:0 499 chr11 5905886 5905886 1 + T A LUSC 5905886 + 5905866 5905906 41 TTCTGTTGGTGGTCATGGCTTATGACCGCTTTGTTGCCATC TTCTGTTGGTGGTCATGGCTAATGACCGCTTTGTTGCCATC Direct Loss 0.945566922324465 0 0.7619076 0 prediction 0.89113384464893 Functional Loss - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5905886 chr11:5905886 nonsynonymous SNV 0.982 1 21 hPsi_associated_SNPs_2458 0 0 0 0 0 unknown 0.438719677330621 0 0.5238152 0 hPsi_site_499 iPseU_CNN:0.5238152;iRNA_PseU:0 500 chr1 24021204 24021204 1 + T G KIRP 24021204 + 24021184 24021224 41 CAGATACTGGAAACTTTGGTTTTGGGATCCAGGAACACATC CAGATACTGGAAACTTTGGTGTTGGGATCCAGGAACACATC Direct Loss 0.945564464100928 0 0.4620895 0 prediction 0.891128928201857 Functional Loss - RPL11 ENSG00000142676 CDS Human protein_coding chr1:24021204 chr1:24021204 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2459 0 0 1 0 2 Cytosol 0.438711582428837 0 0 0 hPsi_site_500 iPseU_CNN:0;iRNA_PseU:0 501 chr3 149374934 149374934 1 + T C SKCM 149374934 + 149374914 149374954 41 CGAGCCCGAATCAGGCTCCTTAAAGAAAGACTCCGGCAGGA CGAGCCCGAATCAGGCTCCTCAAAGAAAGACTCCGGCAGGA Direct Loss 0.945534839269048 0 0.6258544 0 prediction 0.891069678538097 Functional Loss - WWTR1 ENSG00000018408 CDS Human protein_coding chr3:149374934 chr3:149374934 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_2460 0 0 0 0 0 Endoplasmic reticulum 0.438719048623252 0 0.2517088 0 hPsi_site_501 iPseU_CNN:0.2517088;iRNA_PseU:0 502 chr6 121768546 121768546 1 + T C GBM 121768546 + 121768526 121768566 41 GATTCAGCTTGAGTGCTGTTTACACTTGCAAAAGAGATCCC GATTCAGCTTGAGTGCTGTTCACACTTGCAAAAGAGATCCC Direct Loss 0.945534060280102 0 0.3373475 0 prediction 0.891068120560204 Functional Loss - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121768546 chr6:121768546 nonsynonymous SNV 0.876 5 21 hPsi_associated_SNPs_2461 0 0 1 0 1 Endoplasmic reticulum 0.435096259467613 0 0 0 hPsi_site_502 iPseU_CNN:0;iRNA_PseU:0 503 chr6 80383433 80383433 1 + T C UCEC 80383433 + 80383413 80383453 41 AAGAACAGAGGCAATGGATGTACAAAAACGTCCCCCCGGAA AAGAACAGAGGCAATGGATGCACAAAAACGTCCCCCCGGAA Direct Loss 0.945524862354283 0 0.89813995 0 prediction 0.891049724708566 Functional Loss - SH3BGRL2 ENSG00000198478 CDS Human protein_coding chr6:80383433 chr6:80383433 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2462 0 0 1 0 1 Ribosome 0.438717224830088 0 0.7962799 0 hPsi_site_503 iPseU_CNN:0.7962799;iRNA_PseU:0 504 chr7 143807376 143807376 1 + T G CESC 143807376 + 143807356 143807396 41 CCAGACAAAGGAGGGCCGCATAAAGGCCTTCTCCACCTGCT CCAGACAAAGGAGGGCCGCAGAAAGGCCTTCTCCACCTGCT Direct Loss 0.94545397452663 0 0.5572238 0 prediction 0.89090794905326 Functional Loss - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807376 chr7:143807376 nonsynonymous SNV 0.154 0 21 hPsi_associated_SNPs_2463 0 0 0 0 0 unknown 0.438718593014916 0 0.1144476 0 hPsi_site_504 iPseU_CNN:0.1144476;iRNA_PseU:0 505 chr11 6291371 6291371 1 + T A LUAD 6291371 + 6291351 6291391 41 TGGCCATCGCACTGGAGCGGTACAGCGCCATCTGCCGACCA TGGCCATCGCACTGGAGCGGAACAGCGCCATCTGCCGACCA Direct Loss 0.945442937782259 0 0.9398279 0 prediction 0.890885875564517 Functional Loss - CCKBR ENSG00000110148 CDS Human protein_coding chr11:6291371 chr11:6291371 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_2464 0 0 0 0 1 unknown 0.439196828979815 0 0.8796558 0 hPsi_site_505 iPseU_CNN:0.8796558;iRNA_PseU:0 506 chr9 32635041 32635041 1 + T C STAD 32635041 + 32635021 32635061 41 AAGATGATGTCTTCTCCACTTTCAGACACACAGGTAATAGC AAGATGATGTCTTCTCCACTCTCAGACACACAGGTAATAGC Direct Loss 0.945438745967755 0 0.5604711 0 prediction 0.890877491935511 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32635041 chr9:32635041 synonymous SNV . 0 21 hPsi_associated_SNPs_2465 0 0 0 0 1 exosome 0.440919427944847 0 0.1209422 0 hPsi_site_506 iPseU_CNN:0.1209422;iRNA_PseU:0 507 chr17 7460179 7460179 1 + T G UCEC 7460179 + 7460159 7460199 41 CAACCGCCAGATCGGGGAGTTTATAGTCACCCGGGCTGGGC CAACCGCCAGATCGGGGAGTGTATAGTCACCCGGGCTGGGC Direct Loss 0.945435763064425 0 0.50917304 0 prediction 0.89087152612885 Functional Loss - TNFSF12;TNFSF12-TNFSF13 ENSG00000239697;ENSG00000248871 CDS Human other chr17:7460179 chr17:7460179 nonsynonymous SNV 0.986 5 21 hPsi_associated_SNPs_2466 0 0 0 0 2 unknown 0.438718508459966 0 0.0183460799999999 0 hPsi_site_507 iPseU_CNN:0.0183460799999999;iRNA_PseU:0 508 chr9 111625046 111625046 1 + T C CESC 111625046 + 111625026 111625066 41 GACTGGGATACAGTGCAGGATATCTGGGAATATCTCTTCCG GACTGGGATACAGTGCAGGACATCTGGGAATATCTCTTCCG Direct Loss 0.945389407723177 0 0.44377223 0 prediction 0.890778815446353 Functional Loss - ACTL7A ENSG00000187003 CDS Human protein_coding chr9:111625046 chr9:111625046 synonymous SNV . 0 21 hPsi_associated_SNPs_2467 0 0 0 0 0 unknown 0.438756129187231 0 0 0 hPsi_site_508 iPseU_CNN:0;iRNA_PseU:0 509 chr19 582927 582927 1 + T A rs8259 582927 + 582907 582947 41 TCAGGATTCTGTTCCTTAGGTTTTTTTCCTTCTGAAGTGTT TCAGGATTCTGTTCCTTAGGATTTTTTCCTTCTGAAGTGTT Direct Loss 0.945276461922363 0 0.32124233 0 prediction 0.890552923844727 Functional Loss - BSG ENSG00000172270 UTR3 Human protein_coding chr19:582927 chr19:582927 . . 0 21 hPsi_associated_SNPs_2468 0 0 1 0 0 Ribosome 0.438718592995102 0 0 0 hPsi_site_509 iPseU_CNN:0;iRNA_PseU:0 510 chr10 118969526 118969526 1 + T C READ 118969526 + 118969506 118969546 41 CCATCATTGCCCTTATTGTTTTTGCCTACATTTCCTGTGCA CCATCATTGCCCTTATTGTTCTTGCCTACATTTCCTGTGCA Direct Loss 0.945265697904033 0 0.77860886 0 prediction 0.890531395808066 Functional Loss - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118969526 chr10:118969526 nonsynonymous SNV 0.828 2 21 hPsi_associated_SNPs_2469 0 0 0 0 0 unknown 0.438723344181792 0 0.55721772 0 hPsi_site_510 iPseU_CNN:0.55721772;iRNA_PseU:0 511 chr21 31802651 31802651 1 + T C LAML 31802651 + 31802631 31802671 41 GCTCCTTTGGGGGCTACCTGTACTACCCAGGCTCCTACCCC GCTCCTTTGGGGGCTACCTGCACTACCCAGGCTCCTACCCC Direct Loss 0.945189765545955 0 0.9022368 0 prediction 0.89037953109191 Functional Loss - KRTAP13-4 ENSG00000186971 CDS Human protein_coding chr21:31802651 chr21:31802651 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_2470 0 0 0 0 0 unknown 0.438718591508418 0 0.8044736 0 hPsi_site_511 iPseU_CNN:0.8044736;iRNA_PseU:0 512 chr18 19751448 19751448 1 + T C STAD 19751448 + 19751428 19751468 41 GCTGGGAGGACTTGCTGCTGTTCACTGACCTCGACCAAGCC GCTGGGAGGACTTGCTGCTGCTCACTGACCTCGACCAAGCC Direct Loss 0.945187558261449 0 0.599768 0 prediction 0.890375116522898 Functional Loss - GATA6 ENSG00000141448 CDS Human protein_coding chr18:19751448 chr18:19751448 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2471 0 0 1 0 0 Cytosol 0.43724122471238 0 0.199536 0 hPsi_site_512 iPseU_CNN:0.199536;iRNA_PseU:0 513 chr16 67696124 67696124 1 + T C UCEC 67696124 + 67696104 67696144 41 CGTGGGGGTCTGGCTGAGAGTACAGGGCTGCTGGCGGTCAG CGTGGGGGTCTGGCTGAGAGCACAGGGCTGCTGGCGGTCAG Direct Loss 0.94517746313714 0 0.41006172 0 prediction 0.89035492627428 Functional Loss - PARD6A ENSG00000102981 CDS Human protein_coding chr16:67696124 chr16:67696124 synonymous SNV . 0 21 hPsi_associated_SNPs_2472 0 0 1 0 0 Ribosome 0.438737763536935 0 0 0 hPsi_site_513 iPseU_CNN:0;iRNA_PseU:0 514 chrX 19369476 19369476 1 + T C COAD 19369476 + 19369456 19369496 41 GCCTACCGGGCTCACGGCTTTACTTTCACCCGGGGCCTTTC GCCTACCGGGCTCACGGCTTCACTTTCACCCGGGGCCTTTC Direct Loss 0.945164924683159 0 0.5198214 0 prediction 0.890329849366318 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19369476 chrX:19369476 synonymous SNV . 0 21 hPsi_associated_SNPs_2473 0 0 1 0 3 Ribosome 0.438713953881365 0 0.0396428 0 hPsi_site_514 iPseU_CNN:0.0396428;iRNA_PseU:0 515 chr6 29911111 29911111 1 + A G PAAD 29911111 - 29911091 29911131 41 CGTCGTAGGCGTCCTGCCGGTACCCGCGGAGGAAGCGCCCG CGTCGTAGGCGTCCTGCCGGCACCCGCGGAGGAAGCGCCCG Direct Loss 0.945162950121455 0 0.828931 0 prediction 0.89032590024291 Functional Loss - HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911111 chr6:29911111 nonsynonymous SNV 0.006 3 21 hPsi_associated_SNPs_2474 0 0 0 0 1 Endoplasmic reticulum 0.4387187275267 0 0.657862 0 hPsi_site_515 iPseU_CNN:0.657862;iRNA_PseU:0 516 chr12 123875246 123875246 1 + T C rs536801776 123875246 + 123875226 123875266 41 ACAAATGCTCTGGAATGCGTTTCCCCCTTCAGGAAGAGAAC ACAAATGCTCTGGAATGCGTCTCCCCCTTCAGGAAGAGAAC Direct Loss 0.945135345377176 0 0.33661652 0 prediction 0.890270690754352 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123875246 chr12:123875246 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_2475 0 0 1 0 2 Cytosol 0.43915047266757 0 0 0 hPsi_site_516 iPseU_CNN:0;iRNA_PseU:0 517 chr6 28687499 28687499 1 + T A rs111467285 28687499 + 28687479 28687519 41 ACGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGC ACGGGGGTGTAGCTCAGTGGAAGAGCGCGTGCTTAGCATGC Direct Loss 0.945095963207184 0 0.37304288 0 prediction 0.890191926414367 Functional Loss - LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687499 chr6:28687499 . . 0 21 hPsi_associated_SNPs_2476 0 0 1 0 0 unknown 0.440421965680908 0 0 0 hPsi_site_517 iPseU_CNN:0;iRNA_PseU:0 518 chr15 30396144 30396144 1 + T A rs543455013 30396144 + 30396124 30396164 41 GTTCAAGGGCAAACCGAAGTTACTGGCCTCTATCTTCCAGG GTTCAAGGGCAAACCGAAGTAACTGGCCTCTATCTTCCAGG Direct Loss 0.945069196864242 0 0.63642156 0 prediction 0.890138393728484 Functional Loss - ULK4P3 ENSG00000178081 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:30396144 chr15:30396144 . . 0 21 hPsi_associated_SNPs_2477 0 0 0 0 1 unknown 0.438765634316883 0 0.27284312 0 hPsi_site_518 iPseU_CNN:0.27284312;iRNA_PseU:0 519 chr2 74651009 74651009 1 + T C BRCA 74651009 + 74650989 74651029 41 GTCAGGCCGGGTGCTGGTGTTTGACATCCCAGCAAAGGGTC GTCAGGCCGGGTGCTGGTGTCTGACATCCCAGCAAAGGGTC Direct Loss 0.945061395743047 0 0.39654028 0 prediction 0.890122791486093 Functional Loss - WDR54 ENSG00000005448 CDS Human protein_coding chr2:74651009 chr2:74651009 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_2478 0 0 0 0 1 nucleus 0.438718545340215 0 0 0 hPsi_site_519 iPseU_CNN:0;iRNA_PseU:0 520 chr6 137245154 137245154 1 + T C HNSC 137245154 + 137245134 137245174 41 ACGGGCCGCTCACCGCGCAGTACGTCATCGCCGTCTCTGCC ACGGGCCGCTCACCGCGCAGCACGTCATCGCCGTCTCTGCC Direct Loss 0.9450415451237 0 0.9653164 0 prediction 0.890083090247401 Functional Loss - SLC35D3 ENSG00000182747 CDS Human protein_coding chr6:137245154 chr6:137245154 nonsynonymous SNV 0.992 3 21 hPsi_associated_SNPs_2479 0 0 0 0 0 exosome 0.439685658817608 0 0.9306328 0 hPsi_site_520 iPseU_CNN:0.9306328;iRNA_PseU:0 521 chr17 62518886 62518886 1 + T G LGG 62518886 + 62518866 62518906 41 GGAGCCTATCCGAGCAGCTATTCCTTTACATCCACCCTACC GGAGCCTATCCGAGCAGCTAGTCCTTTACATCCACCCTACC Direct Loss 0.945026583381572 0 0.7093512 0 prediction 0.890053166763145 Functional Loss - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62518886 chr17:62518886 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_2480 0 0 1 2 1 Nucleus 0.438718592995108 0 0.4187024 0 hPsi_site_521 iPseU_CNN:0.4187024;iRNA_PseU:0 522 chr3 150128715 150128715 1 + T C STAD 150128715 + 150128695 150128735 41 AGTGTGTCTACCACTTCTGTTACTATGCCAAATGTACCCGC AGTGTGTCTACCACTTCTGTCACTATGCCAAATGTACCCGC Direct Loss 0.944986058842501 0 0.6986661 0 prediction 0.889972117685002 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150128715 chr3:150128715 synonymous SNV . 0 21 hPsi_associated_SNPs_2481 0 0 1 1 0 Ribosome 0.438726107042713 0 0.3973322 0 hPsi_site_522 iPseU_CNN:0.3973322;iRNA_PseU:0 523 chr19 1383582 1383582 1 + T G rs138144610 1383582 + 1383562 1383602 41 GTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACC GTCTCTGTGGCGCAATCGGTGAGCGCGTTCGGCTGTTAACC Direct Loss 0.94498286028294 0 0.9800738 0 prediction 0.88996572056588 Functional Loss - NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383582 chr19:1383582 . . 0 21 hPsi_associated_SNPs_2482 0 0 1 0 1 chromatin 0.438726745387219 0 0.9601476 0 hPsi_site_523 iPseU_CNN:0.9601476;iRNA_PseU:0 524 chr20 61340767 61340767 1 + T C CESC 61340767 + 61340747 61340787 41 AGGTGCTGGTGACCGCCGTGTACCTGGCGCTCTTCGTGGTG AGGTGCTGGTGACCGCCGTGCACCTGGCGCTCTTCGTGGTG Direct Loss 0.944897873065669 0 0.91754603 0 prediction 0.889795746131339 Functional Loss - NTSR1 ENSG00000101188 CDS Human protein_coding chr20:61340767 chr20:61340767 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_2483 0 0 0 0 0 exosome 0.439082004712745 0 0.83509206 0 hPsi_site_524 iPseU_CNN:0.83509206;iRNA_PseU:0 525 chr5 180591173 180591173 1 + T A rs568955071 180591173 + 180591153 180591193 41 AGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGC AGTTTCCGTAGTGTAGTGGTAATCACGTTCGCCTAACACGC Direct Loss 0.944823299683037 0 0.9615341 0 prediction 0.889646599366073 Functional Loss - OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591173 chr5:180591173 . . 0 21 hPsi_associated_SNPs_2484 0 0 0 0 0 unknown 0.438699354638348 0 0.9230682 0 hPsi_site_525 iPseU_CNN:0.9230682;iRNA_PseU:0 526 chrX 31838153 31838153 1 + T A BLCA 31838153 + 31838133 31838173 41 TTTGCCCTCAGCTCTTGAAGTAAACGGTTTACCGCCTTCCA TTTGCCCTCAGCTCTTGAAGAAAACGGTTTACCGCCTTCCA Direct Loss 0.944796507574744 0 0.5848477 0 prediction 0.889593015149488 Functional Loss - DMD ENSG00000198947 CDS Human protein_coding chrX:31838153 chrX:31838153 nonsynonymous SNV 0.905 0 21 hPsi_associated_SNPs_2485 0 0 0 0 0 chromatin 0.438718592995093 0 0.1696954 0 hPsi_site_526 iPseU_CNN:0.1696954;iRNA_PseU:0 527 chr6 26252139 26252139 1 + T C SKCM 26252139 + 26252119 26252159 41 CTGGCTCATTACAACAAGCGTTCGACCATCACCTCCAGGGA CTGGCTCATTACAACAAGCGCTCGACCATCACCTCCAGGGA Direct Loss 0.94479085873114 0 0.42951715 0 prediction 0.88958171746228 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26252139 chr6:26252139 synonymous SNV . 0 21 hPsi_associated_SNPs_2486 0 0 1 0 0 Nucleus 0.438720198220665 0 0 0 hPsi_site_527 iPseU_CNN:0;iRNA_PseU:0 528 chr1 149858874 149858874 1 + T G CESC 149858874 + 149858854 149858894 41 TAACATCCAGGCCGTTCTGTTACCAAAGAAAACCGAAAGCC TAACATCCAGGCCGTTCTGTGACCAAAGAAAACCGAAAGCC Direct Loss 0.944720572577956 0 0.862625 0 prediction 0.889441145155911 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858874 chr1:149858874 stopgain 0.984 0 21 hPsi_associated_SNPs_2487 0 0 1 0 0 Ribosome 0.43877021119493 0 0.72525 0 hPsi_site_528 iPseU_CNN:0.72525;iRNA_PseU:0 529 chr2 219526526 219526526 1 + T C PAAD 219526526 + 219526506 219526546 41 AGGAAGGGAAGACCGTGATGTACACAGCTGTGGGCTCTGAA AGGAAGGGAAGACCGTGATGCACACAGCTGTGGGCTCTGAA Direct Loss 0.944701102146231 0 0.6802927 0 prediction 0.889402204292463 Functional Loss - BCS1L ENSG00000074582 CDS Human protein_coding chr2:219526526 chr2:219526526 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2488 0 0 1 0 1 chromatin 0.436298690345835 0 0.3605854 0 hPsi_site_529 iPseU_CNN:0.3605854;iRNA_PseU:0 530 chr11 66411450 66411450 1 + T A KIRP 66411450 + 66411430 66411470 41 CGGAGCCCCCTGCGTCGCGCTACAGCCCCAGTCCCCACTGT CGGAGCCCCCTGCGTCGCGCAACAGCCCCAGTCCCCACTGT Direct Loss 0.944549554237991 0 0.9057287 0 prediction 0.889099108475982 Functional Loss - RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411450 chr11:66411450 synonymous SNV . 0 21 hPsi_associated_SNPs_2489 0 0 1 0 0 unknown 0.438718592994854 0 0.8114574 0 hPsi_site_530 iPseU_CNN:0.8114574;iRNA_PseU:0 531 chr11 71276948 71276948 1 + T C THCA 71276948 + 71276928 71276968 41 GGCTCCAAGGGGGGCTGTGGTTCTTGTGGGGGCTCCAAGGG GGCTCCAAGGGGGGCTGTGGCTCTTGTGGGGGCTCCAAGGG Direct Loss 0.944487586787899 0 0.35323206 0 prediction 0.888975173575799 Functional Loss - KRTAP5-10 ENSG00000204572 CDS Human protein_coding chr11:71276948 chr11:71276948 synonymous SNV . 0 21 hPsi_associated_SNPs_2490 0 0 0 0 0 unknown 0.438718592995064 0 0 0 hPsi_site_531 iPseU_CNN:0;iRNA_PseU:0 532 chr1 43916939 43916939 1 + A C rs62620015 43916939 - 43916919 43916959 41 TGGCTACGTTCATACTGGGATAGGCGGGGCCACCCAGAGGC TGGCTACGTTCATACTGGGAGAGGCGGGGCCACCCAGAGGC Direct Loss 0.944474085433392 0 0.42328095 0 prediction 0.888948170866784 Functional Loss - HYI ENSG00000178922 CDS Human protein_coding chr1:43916939 chr1:43916939 nonsynonymous SNV 0.834 0 21 hPsi_associated_SNPs_2491 0 0 0 0 1 Ribosome 0.43871859440498 0 0 0 hPsi_site_532 iPseU_CNN:0;iRNA_PseU:0 533 chr14 101520682 101520682 1 + T G STAD 101520682 + 101520662 101520702 41 CGTGGTGGATTCGCTTTACTTATGACGAATCATTCACGGAC CGTGGTGGATTCGCTTTACTGATGACGAATCATTCACGGAC Direct Loss 0.944458361725783 0 0.38212797 0 prediction 0.888916723451565 Functional Loss - MIR382 ENSG00000207742 ncRNA_exonic Human miRNA chr14:101520682 chr14:101520682 . . 0 21 hPsi_associated_SNPs_2492 0 0 1 0 0 unknown 0.438620448721753 0 0 0 hPsi_site_533 iPseU_CNN:0;iRNA_PseU:0 534 chr19 10363316 10363316 1 + T G UCEC 10363316 + 10363296 10363336 41 GGGTCGAGTCCTTGCGGGGCTTCGAGCAGGAGCGCGTGGGC GGGTCGAGTCCTTGCGGGGCGTCGAGCAGGAGCGCGTGGGC Direct Loss 0.944455832374457 0 0.6238462 0 prediction 0.888911664748914 Functional Loss - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10363316 chr19:10363316 nonsynonymous SNV 0.937 0 21 hPsi_associated_SNPs_2493 0 0 1 0 2 Cytosol 0.438718761625822 0 0.2476924 0 hPsi_site_534 iPseU_CNN:0.2476924;iRNA_PseU:0 535 chr17 7578442 7578442 1 + T C BRCA 7578442 + 7578422 7578462 41 TCATGTGCTGTGACTGCTTGTAGATGGCCATGGCGCGGACG TCATGTGCTGTGACTGCTTGCAGATGGCCATGGCGCGGACG Direct Loss 0.944392681576803 0 0.5284188 0 prediction 0.888785363153606 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578442 chr17:7578442 nonsynonymous SNV 0.259 5 21 hPsi_associated_SNPs_2494 16 0 0 0 0 Ribosome 0.438714165382199 0 0.0568375999999999 0 hPsi_site_535 iPseU_CNN:0.0568375999999999;iRNA_PseU:0 536 chr11 55595405 55595405 1 + T C STAD 55595405 + 55595385 55595425 41 GCAGAGAGCAGGCACAAAGCTTTCTCCACCTGTGCCTCCCA GCAGAGAGCAGGCACAAAGCCTTCTCCACCTGTGCCTCCCA Direct Loss 0.944343305220658 0 0.5865443 0 prediction 0.888686610441315 Functional Loss - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595405 chr11:55595405 synonymous SNV . 0 21 hPsi_associated_SNPs_2495 0 0 0 0 0 unknown 0.438716018404504 0 0.1730886 0 hPsi_site_536 iPseU_CNN:0.1730886;iRNA_PseU:0 537 chr3 25833228 25833228 1 + T C rs17017016 25833228 + 25833208 25833248 41 GCTGGAGGTACAGATTCTTGTATTAGCCCTTTATCTCTTGC GCTGGAGGTACAGATTCTTGCATTAGCCCTTTATCTCTTGC Direct Loss 0.94426562283816 0 0.63776433 0 prediction 0.888531245676321 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833228 chr3:25833228 synonymous SNV . 0 21 hPsi_associated_SNPs_2496 0 0 0 0 0 Ribosome 0.439061202589999 0 0.27552866 0 hPsi_site_537 iPseU_CNN:0.27552866;iRNA_PseU:0 538 chr1 155182303 155182303 1 + T C STAD 155182303 + 155182283 155182323 41 GCGGCAGTACATGGAACGGCTACAGCTGCTGACTGGGGAGC GCGGCAGTACATGGAACGGCCACAGCTGCTGACTGGGGAGC Direct Loss 0.944264616894822 0 0.45290965 0 prediction 0.888529233789644 Functional Loss - MTX1 ENSG00000173171 CDS Human protein_coding chr1:155182303 chr1:155182303 nonsynonymous SNV 0.968 4 21 hPsi_associated_SNPs_2497 0 0 0 0 1 Ribosome 0.438704724065094 0 0 0 hPsi_site_538 iPseU_CNN:0;iRNA_PseU:0 539 chr11 55135933 55135933 1 + T C COAD 55135933 + 55135913 55135953 41 TGGTTCAATTTCTCTTTATTTATCAGCTCCCTTTCTGTGGA TGGTTCAATTTCTCTTTATTCATCAGCTCCCTTTCTGTGGA Direct Loss 0.944194787764451 0 0.33371755 0 prediction 0.888389575528901 Functional Loss - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55135933 chr11:55135933 nonsynonymous SNV 0.971 0 21 hPsi_associated_SNPs_2498 0 0 0 0 0 unknown 0.439284305280896 0 0 0 hPsi_site_539 iPseU_CNN:0;iRNA_PseU:0 540 chr19 56696739 56696739 1 + T G rs7258532 56696739 + 56696719 56696759 41 TGAGACTAAGATCCTGAAGTTAAATACCCAGGTCTCATGAA TGAGACTAAGATCCTGAAGTGAAATACCCAGGTCTCATGAA Direct Loss 0.944160945524239 0 0.9129229 0 prediction 0.888321891048479 Functional Loss - GALP ENSG00000197487 UTR3 Human protein_coding chr19:56696739 chr19:56696739 . . 0 21 hPsi_associated_SNPs_2499 0 0 0 0 0 exosome 0.438715941017393 0 0.8258458 0 hPsi_site_540 iPseU_CNN:0.8258458;iRNA_PseU:0 541 chr17 72305471 72305471 1 + A G rs35652186 72305471 - 72305451 72305491 41 GAAGTCCCAGATATCCAGGGTTCCGTCCATCCTGGTGGTAA GAAGTCCCAGATATCCAGGGCTCCGTCCATCCTGGTGGTAA Direct Loss 0.944159111894439 0 0.35489905 0 prediction 0.888318223788878 Functional Loss - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72305471 chr17:72305471 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_2500 0 0 0 0 1 exosome 0.438718593145852 0 0 0 hPsi_site_541 iPseU_CNN:0;iRNA_PseU:0 542 chr11 55889935 55889935 1 + T A LGG 55889935 + 55889915 55889955 41 GAGGTCCAGATGGCTCTGTTTATGCTATTTCTCCTCATATA GAGGTCCAGATGGCTCTGTTAATGCTATTTCTCCTCATATA Direct Loss 0.944142692037148 0 0.32308108 0 prediction 0.888285384074296 Functional Loss - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55889935 chr11:55889935 nonsynonymous SNV 0.004 1 21 hPsi_associated_SNPs_2501 0 0 0 0 0 unknown 0.438676626422825 0 0 0 hPsi_site_542 iPseU_CNN:0;iRNA_PseU:0 543 chr10 102748498 102748498 1 + T C STAD 102748498 + 102748478 102748518 41 GAGGAGGTTCAGCTGGCTGATACAATGTTTGGCCTTACCAA GAGGAGGTTCAGCTGGCTGACACAATGTTTGGCCTTACCAA Direct Loss 0.944134490097255 0 0.4345015 0 prediction 0.88826898019451 Functional Loss - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748498 chr10:102748498 synonymous SNV . 0 21 hPsi_associated_SNPs_2502 0 0 1 0 0 unknown 0.438718592985303 0 0 0 hPsi_site_543 iPseU_CNN:0;iRNA_PseU:0 544 chr19 33697065 33697065 1 + T C HNSC 33697065 + 33697045 33697085 41 CCCGGCACCTTCCACTGCGGTACCAACCTGTGCATCTTCGA CCCGGCACCTTCCACTGCGGCACCAACCTGTGCATCTTCGA Direct Loss 0.94409297123786 0 0.7226826 0 prediction 0.88818594247572 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33697065 chr19:33697065 synonymous SNV . 0 21 hPsi_associated_SNPs_2503 0 0 1 0 0 Ribosome 0.438703215498471 0 0.4453652 0 hPsi_site_544 iPseU_CNN:0.4453652;iRNA_PseU:0 545 chr19 7987422 7987422 1 + T C STAD 7987422 + 7987402 7987442 41 TTGAGCATATGACGGAGACGTACCTACGCCTGACAGCCCCC TTGAGCATATGACGGAGACGCACCTACGCCTGACAGCCCCC Direct Loss 0.944074331322972 0 0.7334098 0 prediction 0.888148662645944 Functional Loss - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987422 chr19:7987422 nonsynonymous SNV 0.003 3 21 hPsi_associated_SNPs_2504 0 0 0 2 0 Ribosome 0.438588746008764 0 0.4668196 0 hPsi_site_545 iPseU_CNN:0.4668196;iRNA_PseU:0 546 chr10 134016247 134016247 1 + T G STAD 134016247 + 134016227 134016267 41 GCTGGAGGACGGGAAGATGTTTGTCACCCCGGGGGCGGGCC GCTGGAGGACGGGAAGATGTGTGTCACCCCGGGGGCGGGCC Direct Loss 0.943973329945004 0 0.3062089 0 prediction 0.887946659890007 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134016247 chr10:134016247 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_2505 0 0 0 0 1 Endoplasmic reticulum 0.438415903406448 0 0 0 hPsi_site_546 iPseU_CNN:0;iRNA_PseU:0 547 chr12 120650328 120650328 1 + T C LUAD 120650328 + 120650308 120650348 41 CGTGGTAGTGCACCTCACAGTAGGGCTGCCCGTCGTGCTCG CGTGGTAGTGCACCTCACAGCAGGGCTGCCCGTCGTGCTCG Direct Loss 0.943972177170004 0 0.50294584 0 prediction 0.887944354340007 Functional Loss - PXN ENSG00000089159 CDS Human protein_coding chr12:120650328 chr12:120650328 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_2506 0 0 1 0 0 Cytosol 0.43867415344298 0 0.00589167999999995 0 hPsi_site_547 iPseU_CNN:0.00589167999999995;iRNA_PseU:0 548 chr17 42926680 42926680 1 + T C rs146461984 42926680 + 42926660 42926700 41 TACCGGCTGAGGTCTCGTGGTTCCACCAAGATGTCCATACA TACCGGCTGAGGTCTCGTGGCTCCACCAAGATGTCCATACA Direct Loss 0.943945805679944 0 0.5110495 0 prediction 0.887891611359888 Functional Loss - HIGD1B ENSG00000131097 CDS Human protein_coding chr17:42926680 chr17:42926680 synonymous SNV . 0 21 hPsi_associated_SNPs_2507 0 0 0 0 2 nucleolus 0.438718594538091 0 0.0220990000000001 0 hPsi_site_548 iPseU_CNN:0.0220990000000001;iRNA_PseU:0 549 chr11 113651104 113651104 1 + T C UCEC 113651104 + 113651084 113651124 41 GGGAAAAGAAGATGTGCCTTTTCCTTTGATGGCTGGTCCCA GGGAAAAGAAGATGTGCCTTCTCCTTTGATGGCTGGTCCCA Direct Loss 0.94385787270185 0 0.38572642 0 prediction 0.887715745403701 Functional Loss - CLDN25 ENSG00000228607 CDS Human protein_coding chr11:113651104 chr11:113651104 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_2508 0 0 0 0 0 unknown 0.438718592668636 0 0 0 hPsi_site_549 iPseU_CNN:0;iRNA_PseU:0 550 chr4 94751008 94751008 1 + T G COAD 94751008 + 94750988 94751028 41 CGATGATGGCGCAAAAGAATTTGTCTCCTTCTCTCCCCGGG CGATGATGGCGCAAAAGAATGTGTCTCCTTCTCTCCCCGGG Direct Loss 0.943815448134456 0 0.5625663 0 prediction 0.887630896268912 Functional Loss - ATOH1 ENSG00000172238 CDS Human protein_coding chr4:94751008 chr4:94751008 nonsynonymous SNV 0.914 2 21 hPsi_associated_SNPs_2509 0 0 0 0 0 unknown 0.448177805475078 0 0.1251326 0 hPsi_site_550 iPseU_CNN:0.1251326;iRNA_PseU:0 551 chr11 18723292 18723292 1 + T G LUSC 18723292 + 18723272 18723312 41 GTGGGGGTCTATGTGGCCCTTATCGGCTTCATGGGCTGGCG GTGGGGGTCTATGTGGCCCTGATCGGCTTCATGGGCTGGCG Direct Loss 0.943809530495678 0 0.4577651 0 prediction 0.887619060991356 Functional Loss - TMEM86A ENSG00000151117 CDS Human protein_coding chr11:18723292 chr11:18723292 synonymous SNV . 0 21 hPsi_associated_SNPs_2510 0 0 0 0 0 Endoplasmic reticulum 0.438600092338975 0 0 0 hPsi_site_551 iPseU_CNN:0;iRNA_PseU:0 552 chr2 97482046 97482046 1 + T A LUSC 97482046 + 97482026 97482066 41 GGTAGCTGCGGCGGGTCGGTTAGGCTGGTTGTTCGCCGCGC GGTAGCTGCGGCGGGTCGGTAAGGCTGGTTGTTCGCCGCGC Direct Loss 0.943785941968801 0 0.76608956 0 prediction 0.887571883937601 Functional Loss - CNNM3 ENSG00000168763 CDS Human protein_coding chr2:97482046 chr2:97482046 stopgain 0.499 0 21 hPsi_associated_SNPs_2511 0 0 1 0 0 Ribosome 0.439233376694289 0 0.53217912 0 hPsi_site_552 iPseU_CNN:0.53217912;iRNA_PseU:0 553 chr2 27322367 27322367 1 + T C KIRP 27322367 + 27322347 27322387 41 AATTGCTCCACTCGGATGCTTTCCCGCCACCCCGCGTGGTG AATTGCTCCACTCGGATGCTCTCCCGCCACCCCGCGTGGTG Direct Loss 0.943772640000201 0 0.87635064 0 prediction 0.887545280000401 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27322367 chr2:27322367 nonsynonymous SNV 0.459 2 21 hPsi_associated_SNPs_2512 0 0 1 0 1 Endoplasmic reticulum 0.438718689745948 0 0.75270128 0 hPsi_site_553 iPseU_CNN:0.75270128;iRNA_PseU:0 554 chr3 52836770 52836770 1 + T C HNSC 52836770 + 52836750 52836790 41 GGGACTACATCTTCGGGAATTACATTGAGCGGCTCTGGGCC GGGACTACATCTTCGGGAATCACATTGAGCGGCTCTGGGCC Direct Loss 0.943677432455908 0 0.72920096 0 prediction 0.887354864911815 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836770 chr3:52836770 nonsynonymous SNV 0.757 1 21 hPsi_associated_SNPs_2513 0 0 1 0 2 cytosol 0.438725816368963 0 0.45840192 0 hPsi_site_554 iPseU_CNN:0.45840192;iRNA_PseU:0 555 chrX 75397514 75397514 1 + T C CESC 75397514 + 75397494 75397534 41 GGAAGGCTATAACAAAGCTGTTTATATCAGTGTTCAGGACA GGAAGGCTATAACAAAGCTGCTTATATCAGTGTTCAGGACA Direct Loss 0.943574250923897 0 0.34424853 0 prediction 0.887148501847794 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397514 chrX:75397514 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2514 0 0 0 0 1 nucleoplasm 0.438718562470597 0 0 0 hPsi_site_555 iPseU_CNN:0;iRNA_PseU:0 556 chr10 114044417 114044417 1 + T C SKCM 114044417 + 114044397 114044437 41 AATGGGGTCCACGAAGGAGGTTACTACCAATTTGTGATCCC AATGGGGTCCACGAAGGAGGCTACTACCAATTTGTGATCCC Direct Loss 0.943542290186819 0 0.31652844 0 prediction 0.887084580373638 Functional Loss - TECTB ENSG00000119913 CDS Human protein_coding chr10:114044417 chr10:114044417 synonymous SNV . 0 21 hPsi_associated_SNPs_2515 0 0 0 0 1 unknown 0.438718592995771 0 0 0 hPsi_site_556 iPseU_CNN:0;iRNA_PseU:0 557 chr2 24239764 24239764 1 + T C UCEC 24239764 + 24239744 24239784 41 TGGCCTACTTCTTCCTGTGGTTCCTGCCCCCCTTCACCAGC TGGCCTACTTCTTCCTGTGGCTCCTGCCCCCCTTCACCAGC Direct Loss 0.943508358076992 0 0.5619538 0 prediction 0.887016716153985 Functional Loss - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24239764 chr2:24239764 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_2516 0 0 1 2 1 Endoplasmic reticulum 0.439235980008477 0 0.1239076 0 hPsi_site_557 iPseU_CNN:0.1239076;iRNA_PseU:0 558 chr2 27306388 27306388 1 + T G SKCM 27306388 + 27306368 27306408 41 GCAAGGAGAGCTCTCTGAGGTTATTCTCAGCTTCAGCTCCC GCAAGGAGAGCTCTCTGAGGGTATTCTCAGCTTCAGCTCCC Direct Loss 0.943492581034432 0 0.6405722 0 prediction 0.886985162068863 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27306388 chr2:27306388 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_2517 0 0 0 0 0 Cytosol 0.438718581644824 0 0.2811444 0 hPsi_site_558 iPseU_CNN:0.2811444;iRNA_PseU:0 559 chr11 75438611 75438611 1 + T A LUAD 75438611 + 75438591 75438631 41 TTCTCTTCGATCTTCCCCGGTATCCGCCCCCATCTGATGAT TTCTCTTCGATCTTCCCCGGAATCCGCCCCCATCTGATGAT Direct Loss 0.943369954893053 0 0.5636569 0 prediction 0.886739909786105 Functional Loss - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75438611 chr11:75438611 synonymous SNV . 0 21 hPsi_associated_SNPs_2518 0 0 0 0 1 exosome 0.438718592995102 0 0.1273138 0 hPsi_site_559 iPseU_CNN:0.1273138;iRNA_PseU:0 560 chr11 812574 812574 1 + T A SKCM 812574 + 812554 812594 41 TGTACCTGCTGGTGGGGCTGTAGCCGTCTCTGCTGCCCCAG TGTACCTGCTGGTGGGGCTGAAGCCGTCTCTGCTGCCCCAG Direct Loss 0.943358005844051 0 0.62279403 0 prediction 0.886716011688103 Functional Loss - RPLP2 ENSG00000177600 CDS Human protein_coding chr11:812574 chr11:812574 nonsynonymous SNV 0.888 3 21 hPsi_associated_SNPs_2519 0 0 1 0 2 Ribosome 0.43869294243207 0 0.24558806 0 hPsi_site_560 iPseU_CNN:0.24558806;iRNA_PseU:0 561 chr8 20070374 20070374 1 + T C STAD 20070374 + 20070354 20070394 41 TGTGAGAAACATGTATTGGTTATTCTAACAGACATGAGTTC TGTGAGAAACATGTATTGGTCATTCTAACAGACATGAGTTC Direct Loss 0.943352302614175 0 0.70087934 0 prediction 0.88670460522835 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20070374 chr8:20070374 synonymous SNV . 0 21 hPsi_associated_SNPs_2520 0 0 1 0 2 Ribosome 0.441986128055211 0 0.40175868 0 hPsi_site_561 iPseU_CNN:0.40175868;iRNA_PseU:0 562 chr1 150307607 150307607 1 + T A UCEC 150307607 + 150307587 150307627 41 GACATGGAATCCAATACCTTTTTTGACCCCCGAGTCTCCAT GACATGGAATCCAATACCTTATTTGACCCCCGAGTCTCCAT Direct Loss 0.943234826844372 0 0.35019514 0 prediction 0.886469653688745 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307607 chr1:150307607 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2521 0 0 1 0 0 Nucleus 0.438712040369026 0 0 0 hPsi_site_562 iPseU_CNN:0;iRNA_PseU:0 563 chr8 97307440 97307440 1 + T G UCEC 97307440 + 97307420 97307460 41 AGGCCTTGCTGATCCGTAGTTACGGTCTCTGCTGGACAATC AGGCCTTGCTGATCCGTAGTGACGGTCTCTGCTGGACAATC Direct Loss 0.94320879053011 0 0.7647226 0 prediction 0.88641758106022 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97307440 chr8:97307440 nonsynonymous SNV 0.915 3 21 hPsi_associated_SNPs_2522 0 0 1 0 1 Ribosome 0.438288411826595 0 0.5294452 0 hPsi_site_563 iPseU_CNN:0.5294452;iRNA_PseU:0 564 chr6 134210965 134210965 1 + T C STAD 134210965 + 134210945 134210985 41 ACGACAAATACGAGAACGGGTACATTCACCCGGTCAACCTG ACGACAAATACGAGAACGGGCACATTCACCCGGTCAACCTG Direct Loss 0.943203394166601 0 0.8997146 0 prediction 0.886406788333201 Functional Loss - TCF21 ENSG00000118526 CDS Human protein_coding chr6:134210965 chr6:134210965 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_2523 0 0 0 0 1 exosome 0.438713166863579 0 0.7994292 0 hPsi_site_564 iPseU_CNN:0.7994292;iRNA_PseU:0 565 chr20 368728 368728 1 + T C LUSC 368728 + 368708 368748 41 GTTGGAGTTGGATGACAACTTAGATACCGAGCGTCCCGTCC GTTGGAGTTGGATGACAACTCAGATACCGAGCGTCCCGTCC Direct Loss 0.943183451791252 0 0.6812236 0 prediction 0.886366903582504 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368728 chr20:368728 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_2524 0 0 1 0 1 Ribosome 0.438607199785622 0 0.3624472 0 hPsi_site_565 iPseU_CNN:0.3624472;iRNA_PseU:0 566 chr12 51634178 51634178 1 + T C STAD 51634178 + 51634158 51634198 41 GCAGCCTCCTGGGAATCCAGTATACCCTCAGACCTTGCATC GCAGCCTCCTGGGAATCCAGCATACCCTCAGACCTTGCATC Direct Loss 0.943135215581597 0 0.57104605 0 prediction 0.886270431163195 Functional Loss - DAZAP2 ENSG00000183283 CDS Human protein_coding chr12:51634178 chr12:51634178 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_2525 0 0 1 0 2 Ribosome 0.438662045646138 0 0.1420921 0 hPsi_site_566 iPseU_CNN:0.1420921;iRNA_PseU:0 567 chr22 27026309 27026309 1 + T G UCEC 27026309 + 27026289 27026329 41 TTTTCTCTTTTCCAGCTGGGTTTGCTCCCAGTTTCCGGGCT TTTTCTCTTTTCCAGCTGGGGTTGCTCCCAGTTTCCGGGCT Direct Loss 0.943102271487931 0 0.31942117 0 prediction 0.886204542975862 Functional Loss - CRYBA4 ENSG00000196431 CDS Human protein_coding chr22:27026309 chr22:27026309 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_2526 0 0 0 0 1 Cytosol 0.438718595812923 0 0 0 hPsi_site_567 iPseU_CNN:0;iRNA_PseU:0 568 chr20 409647 409647 1 + T C SKCM 409647 + 409627 409667 41 CCCCCAGTGCCAGATCGTGGTACAGAAGAAGGACGGCTGCG CCCCCAGTGCCAGATCGTGGCACAGAAGAAGGACGGCTGCG Direct Loss 0.943051161286563 0 0.6540374 0 prediction 0.886102322573126 Functional Loss - RBCK1 ENSG00000125826 CDS Human protein_coding chr20:409647 chr20:409647 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2527 0 0 0 0 2 Ribosome 0.438718027131743 0 0.3080748 0 hPsi_site_568 iPseU_CNN:0.3080748;iRNA_PseU:0 569 chr16 31123534 31123534 1 + T C UCEC 31123534 + 31123514 31123554 41 GCAGGGCATTGGCACGGACGTCTACCTGCGGCTCCGCCACA GCAGGGCATTGGCACGGACGCCTACCTGCGGCTCCGCCACA Direct Loss 0.943050667003631 0 0.24709517 0 prediction 0.886101334007262 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31123534 chr16:31123534 nonsynonymous SNV 0.954 1 21 hPsi_associated_SNPs_2528 0 0 1 2 1 Ribosome 0.438718594435527 0 0 0 hPsi_site_569 iPseU_CNN:0;iRNA_PseU:0 570 chr16 54965177 54965177 1 + T C STAD 54965177 + 54965157 54965197 41 CGCTCTACTCGTGCCCGGCGTACAGCACCAGCGTCATTTCG CGCTCTACTCGTGCCCGGCGCACAGCACCAGCGTCATTTCG Direct Loss 0.942976093149865 0 0.93827856 0 prediction 0.88595218629973 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54965177 chr16:54965177 nonsynonymous SNV 0.993 4 21 hPsi_associated_SNPs_2529 0 0 0 0 0 exosome 0.444138848477104 0 0.87655712 0 hPsi_site_570 iPseU_CNN:0.87655712;iRNA_PseU:0 571 chr1 110171789 110171789 1 + T C UCEC 110171789 + 110171769 110171809 41 AGGAGATGCTGGAGAACATCTTCCTGCCACTGTTCGAGGCC AGGAGATGCTGGAGAACATCCTCCTGCCACTGTTCGAGGCC Direct Loss 0.942943693576683 0 0.623511 0 prediction 0.885887387153367 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110171789 chr1:110171789 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_2530 0 0 1 1 2 Cytosol 0.43860137470127 0 0.247022 0 hPsi_site_571 iPseU_CNN:0.247022;iRNA_PseU:0 572 chr5 177574760 177574760 1 + T C STAD 177574760 + 177574740 177574780 41 AACTAGGCATGAAGTGCTGGTACCACTCCGTGTTCGCTTGC AACTAGGCATGAAGTGCTGGCACCACTCCGTGTTCGCTTGC Direct Loss 0.942917592224245 0 0.8847326 0 prediction 0.88583518444849 Functional Loss - RMND5B ENSG00000145916 CDS Human protein_coding chr5:177574760 chr5:177574760 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2531 0 0 1 0 1 Cytosol 0.438639595899632 0 0.7694652 0 hPsi_site_572 iPseU_CNN:0.7694652;iRNA_PseU:0 573 chr19 40199920 40199920 1 + T C PRAD 40199920 + 40199900 40199940 41 ATGCTGCAAGTCTTCAGAGATATCTCCCTGACCAGAGTGCT ATGCTGCAAGTCTTCAGAGACATCTCCCTGACCAGAGTGCT Direct Loss 0.942912265528248 0 0.34574848 0 prediction 0.885824531056495 Functional Loss - LGALS14 ENSG00000006659 CDS Human protein_coding chr19:40199920 chr19:40199920 synonymous SNV . 0 21 hPsi_associated_SNPs_2532 0 0 0 0 1 exosome 0.438724876589141 0 0 0 hPsi_site_573 iPseU_CNN:0;iRNA_PseU:0 574 chr17 7578251 7578251 1 + T C COAD 7578251 + 7578231 7578271 41 CAAATACTCCACACGCAAATTTCCTTCCACTCGGATAAGAT CAAATACTCCACACGCAAATCTCCTTCCACTCGGATAAGAT Direct Loss 0.942895066438443 0 0.42394257 0 prediction 0.885790132876886 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578251 chr17:7578251 nonsynonymous SNV 0.979 5 21 hPsi_associated_SNPs_2533 0 0 0 0 0 Ribosome 0.436155053069 0 0 0 hPsi_site_574 iPseU_CNN:0;iRNA_PseU:0 575 chr20 43379066 43379066 1 + T C LIHC 43379066 + 43379046 43379086 41 TCCACGCCTACTACTACTGCTTCATCACCCTCACCACCATC TCCACGCCTACTACTACTGCCTCATCACCCTCACCACCATC Direct Loss 0.942810959402712 0 0.6869969 0 prediction 0.885621918805424 Functional Loss - KCNK15 ENSG00000124249 CDS Human protein_coding chr20:43379066 chr20:43379066 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2534 0 0 0 0 0 Nucleus 0.43871860285116 0 0.3739938 0 hPsi_site_575 iPseU_CNN:0.3739938;iRNA_PseU:0 576 chr17 34893344 34893344 1 + T G COAD 34893344 + 34893324 34893364 41 ACAATCCAGCCATCTCCTGTTTCCGTGTAATTACCAGTGCG ACAATCCAGCCATCTCCTGTGTCCGTGTAATTACCAGTGCG Direct Loss 0.942803449198443 0 0.32743108 0 prediction 0.885606898396886 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893344 chr17:34893344 nonsynonymous SNV 0.959 1 21 hPsi_associated_SNPs_2535 0 0 1 0 0 Ribosome 0.438718965754548 0 0 0 hPsi_site_576 iPseU_CNN:0;iRNA_PseU:0 577 chr6 31138004 31138004 1 + T A SKCM 31138004 + 31137984 31138024 41 CTCACTTGCCTCCTCCGGGTTTTGCTCCAGCTTCTCCTTCT CTCACTTGCCTCCTCCGGGTATTGCTCCAGCTTCTCCTTCT Direct Loss 0.942663899398674 0 0.84095454 0 prediction 0.885327798797348 Functional Loss - POU5F1 ENSG00000204531 CDS Human protein_coding chr6:31138004 chr6:31138004 nonsynonymous SNV 0.343 1 21 hPsi_associated_SNPs_2536 0 0 0 0 0 chromatin 0.438718404093079 0 0.68190908 0 hPsi_site_577 iPseU_CNN:0.68190908;iRNA_PseU:0 578 chr1 156594190 156594190 1 + T C STAD 156594190 + 156594170 156594210 41 GGGGCCGGTACCAGTTCAATTACTACGAGGCGAAGCAGGCG GGGGCCGGTACCAGTTCAATCACTACGAGGCGAAGCAGGCG Direct Loss 0.942663393865017 0 0.439695 0 prediction 0.885326787730034 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594190 chr1:156594190 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2537 0 0 0 0 1 exosome 0.438718590837046 0 0 0 hPsi_site_578 iPseU_CNN:0;iRNA_PseU:0 579 chr5 131607060 131607060 1 + T C KIRC 131607060 + 131607040 131607080 41 TCGACCTGGGCTCCGAGGTGTACAGGATGCTGCGGGAGCCA TCGACCTGGGCTCCGAGGTGCACAGGATGCTGCGGGAGCCA Direct Loss 0.942615037730451 0 0.7244565 0 prediction 0.885230075460902 Functional Loss - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607060 chr5:131607060 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2538 0 0 1 0 2 chromatin 0.438718672355609 0 0.448913 0 hPsi_site_579 iPseU_CNN:0.448913;iRNA_PseU:0 580 chr20 43559272 43559272 1 + T C COAD 43559272 + 43559252 43559292 41 AGGCCATCTTGACCAACCAGTACATGCAGCGCCTCTCCACC AGGCCATCTTGACCAACCAGCACATGCAGCGCCTCTCCACC Direct Loss 0.942449410234436 0 0.7411223 0 prediction 0.884898820468872 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43559272 chr20:43559272 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_2539 0 0 1 0 1 chromatin 0.438696180810014 0 0.4822446 0 hPsi_site_580 iPseU_CNN:0.4822446;iRNA_PseU:0 581 chr1 155288690 155288690 1 + T C OV 155288690 + 155288670 155288710 41 AGACAGCTTTCTACTCCTTCTACCTTCCTATAGCTGCAGCC AGACAGCTTTCTACTCCTTCCACCTTCCTATAGCTGCAGCC Direct Loss 0.942425987312111 0 0.23057774 0 prediction 0.884851974624221 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155288690 chr1:155288690 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_2540 0 0 1 0 2 Cytosol 0.438718589695389 0 0 0 hPsi_site_581 iPseU_CNN:0;iRNA_PseU:0 582 chr3 15297718 15297718 1 + T G BLCA 15297718 + 15297698 15297738 41 GGAGGTGCTGCTTTGGCTCTTACTGCTGCCACCACTGCCAC GGAGGTGCTGCTTTGGCTCTGACTGCTGCCACCACTGCCAC Direct Loss 0.942403658173348 0 0.67202866 0 prediction 0.884807316346696 Functional Loss - SH3BP5 ENSG00000131370 CDS Human protein_coding chr3:15297718 chr3:15297718 nonsynonymous SNV 0.510 0 21 hPsi_associated_SNPs_2541 0 0 1 0 0 Ribosome 0.438715977096038 0 0.34405732 0 hPsi_site_582 iPseU_CNN:0.34405732;iRNA_PseU:0 583 chr11 57428563 57428563 1 + T C STAD 57428563 + 57428543 57428583 41 TTTTATGGATTCCGAGGCTGTTTCTATCCCCATGCCTTCAA TTTTATGGATTCCGAGGCTGCTTCTATCCCCATGCCTTCAA Direct Loss 0.942389452360675 0 0.64291596 0 prediction 0.88477890472135 Functional Loss - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428563 chr11:57428563 synonymous SNV . 0 21 hPsi_associated_SNPs_2542 0 0 1 0 0 Cytosol 0.438718592995735 0 0.28583192 0 hPsi_site_583 iPseU_CNN:0.28583192;iRNA_PseU:0 584 chr11 6415662 6415662 1 + T G COAD 6415662 + 6415642 6415682 41 ACTTTTCCAGACCTTCTGGTTTCTCTACCATAAGGGCCACC ACTTTTCCAGACCTTCTGGTGTCTCTACCATAAGGGCCACC Direct Loss 0.942388816836567 0 0.60419744 0 prediction 0.884777633673134 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415662 chr11:6415662 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2543 0 0 0 1 0 Endoplasmic reticulum 0.438718593975957 0 0.20839488 0 hPsi_site_584 iPseU_CNN:0.20839488;iRNA_PseU:0 585 chr19 39665625 39665625 1 + T C GBM 39665625 + 39665605 39665645 41 TGGTGGAGATGTACAACAGCTACCTGGTGGGGGACGAGCTC TGGTGGAGATGTACAACAGCCACCTGGTGGGGGACGAGCTC Direct Loss 0.942383425150658 0 0.6655301 0 prediction 0.884766850301316 Functional Loss - PAK4 ENSG00000130669 CDS Human protein_coding chr19:39665625 chr19:39665625 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_2544 0 0 1 0 2 Ribosome 0.43862948195976 0 0.3310602 0 hPsi_site_585 iPseU_CNN:0.3310602;iRNA_PseU:0 586 chr22 42473551 42473551 1 + T C LUAD 42473551 + 42473531 42473571 41 GGCTCCCGTGCCCGAGGAGTTTGCCTTTGCCATCTGCTTTG GGCTCCCGTGCCCGAGGAGTCTGCCTTTGCCATCTGCTTTG Direct Loss 0.942375854477928 0 0.2903602 0 prediction 0.884751708955856 Functional Loss - FAM109B ENSG00000177096 CDS Human protein_coding chr22:42473551 chr22:42473551 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_2545 0 0 0 0 0 exosome 0.438718247948132 0 0 0 hPsi_site_586 iPseU_CNN:0;iRNA_PseU:0 587 chr9 106857732 106857732 1 + T C UCEC 106857732 + 106857712 106857752 41 AGAGGACCGAAGTCAATGGTTTTGACCCCCTCTTCAATGCT AGAGGACCGAAGTCAATGGTCTTGACCCCCTCTTCAATGCT Direct Loss 0.942339776318554 0 0.69875443 0 prediction 0.884679552637109 Functional Loss - SMC2 ENSG00000136824 CDS Human protein_coding chr9:106857732 chr9:106857732 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2546 0 0 1 0 0 Cytosol 0.438718593032814 0 0.39750886 0 hPsi_site_587 iPseU_CNN:0.39750886;iRNA_PseU:0 588 chr1 53072454 53072454 1 + T C rs1970951 53072454 + 53072434 53072474 41 GACCTGGGCCCCCACCACTTTAACGTGCTCGCCTTCCCCTG GACCTGGGCCCCCACCACTTCAACGTGCTCGCCTTCCCCTG Direct Loss 0.94232752289079 0 0.6790163 0 prediction 0.884655045781581 Functional Loss - GPX7 ENSG00000116157 CDS Human protein_coding chr1:53072454 chr1:53072454 synonymous SNV . 0 21 hPsi_associated_SNPs_2547 0 0 0 0 1 exosome 0.438718592995102 0 0.3580326 0 hPsi_site_588 iPseU_CNN:0.3580326;iRNA_PseU:0 Night sleep phenotypes 589 chr8 42401724 42401724 1 + T C COAD 42401724 + 42401704 42401744 41 TGATAGTTATCCTTGTTAGCTTCGGTCTCTTCATGTATGCC TGATAGTTATCCTTGTTAGCCTCGGTCTCTTCATGTATGCC Direct Loss 0.942253379198006 0 0.4915097 0 prediction 0.884506758396012 Functional Loss - SMIM19 ENSG00000176209 CDS Human protein_coding chr8:42401724 chr8:42401724 nonsynonymous SNV 0.979 1 21 hPsi_associated_SNPs_2548 0 0 1 0 1 Ribosome 0.438718594572353 0 0 0 hPsi_site_589 iPseU_CNN:0;iRNA_PseU:0 590 chr1 227076699 227076699 1 + T C UCEC 227076699 + 227076679 227076719 41 TGGCCCTAGTGTTCATCAAGTACCTCCCAGAGTGGTCCGCG TGGCCCTAGTGTTCATCAAGCACCTCCCAGAGTGGTCCGCG Direct Loss 0.942234080808836 0 0.6850517 0 prediction 0.884468161617672 Functional Loss - PSEN2 ENSG00000143801 CDS Human protein_coding chr1:227076699 chr1:227076699 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2549 0 0 1 2 1 Endoplasmic reticulum 0.438719371045932 0 0.3701034 0 hPsi_site_590 iPseU_CNN:0.3701034;iRNA_PseU:0 591 chr9 79634826 79634826 1 + T C LUAD 79634826 + 79634806 79634846 41 ACCAGCCTGGCAAGGGTAGCTTCTGGGCGCTGCACCCCGAC ACCAGCCTGGCAAGGGTAGCCTCTGGGCGCTGCACCCCGAC Direct Loss 0.942199812399715 0 0.42269063 0 prediction 0.884399624799429 Functional Loss - FOXB2 ENSG00000204612 CDS Human protein_coding chr9:79634826 chr9:79634826 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2550 0 0 0 0 0 unknown 0.438717834464771 0 0 0 hPsi_site_591 iPseU_CNN:0;iRNA_PseU:0 592 chr8 123964601 123964601 1 + T G UCEC 123964601 + 123964581 123964621 41 GATCAACTCTTTCAACAAGTTTCCTTACCCGACCCAGGCTG GATCAACTCTTTCAACAAGTGTCCTTACCCGACCCAGGCTG Direct Loss 0.942139885135105 0 0.6008571 0 prediction 0.884279770270211 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964601 chr8:123964601 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2551 0 0 1 0 0 Nucleus 0.438718517333151 0 0.2017142 0 hPsi_site_592 iPseU_CNN:0.2017142;iRNA_PseU:0 593 chr20 25657022 25657022 1 + A C SKCM 25657022 - 25657002 25657042 41 CCAGGAGTGTGGGCGAAGGTTTAACGATAAGTCCTCATACA CCAGGAGTGTGGGCGAAGGTGTAACGATAAGTCCTCATACA Direct Loss 0.942118902621488 0 0.74469125 0 prediction 0.884237805242976 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25657022 chr20:25657022 nonsynonymous SNV 0.010 3 21 hPsi_associated_SNPs_2552 0 0 1 0 0 Cytosol 0.438719235086533 0 0.4893825 0 hPsi_site_593 iPseU_CNN:0.4893825;iRNA_PseU:0 594 chr7 155090115 155090115 1 + T G UCEC 155090115 + 155090095 155090135 41 GTTGGGGAGATGATCAACGTTTCCGTGTCCGGGCCCTCCCT GTTGGGGAGATGATCAACGTGTCCGTGTCCGGGCCCTCCCT Direct Loss 0.94211779359349 0 0.6484153 0 prediction 0.88423558718698 Functional Loss - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090115 chr7:155090115 synonymous SNV . 0 21 hPsi_associated_SNPs_2553 0 0 1 0 0 Endoplasmic reticulum 0.43786374415602 0 0.2968306 0 hPsi_site_594 iPseU_CNN:0.2968306;iRNA_PseU:0 595 chr15 66170134 66170134 1 + T C STAD 66170134 + 66170114 66170154 41 CTGTAGGTGCCTTATTGGTTTATGACATTGCTAAACATCTC CTGTAGGTGCCTTATTGGTTCATGACATTGCTAAACATCTC Direct Loss 0.942071365164677 0 0.41335753 0 prediction 0.884142730329354 Functional Loss - RAB11A ENSG00000103769 CDS Human protein_coding chr15:66170134 chr15:66170134 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2554 0 0 1 0 1 Ribosome 0.438712918383234 0 0 0 hPsi_site_595 iPseU_CNN:0;iRNA_PseU:0 596 chr19 10224551 10224551 1 + T A rs116946867 10224551 + 10224531 10224571 41 CGCTGCCCCCGCTGGCCGCCTACCTCTATCCCCCCAAGCAC CGCTGCCCCCGCTGGCCGCCAACCTCTATCCCCCCAAGCAC Direct Loss 0.942022771005999 0 0.8539859 0 prediction 0.884045542011997 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224551 chr19:10224551 nonsynonymous SNV 0.181 3 21 hPsi_associated_SNPs_2555 0 0 1 0 0 unknown 0.438718592995012 0 0.7079718 0 hPsi_site_596 iPseU_CNN:0.7079718;iRNA_PseU:0 597 chr16 88664615 88664615 1 + T C UCEC 88664615 + 88664595 88664635 41 CCTGGGGAATGAATTGTAGGTTTATACACCCTGGAGTGAAC CCTGGGGAATGAATTGTAGGCTTATACACCCTGGAGTGAAC Direct Loss 0.94200733389231 0 0.33330557 0 prediction 0.884014667784619 Functional Loss - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88664615 chr16:88664615 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2556 0 0 1 0 1 chromatin 0.43871800828446 0 0 0 hPsi_site_597 iPseU_CNN:0;iRNA_PseU:0 598 chr19 51986477 51986477 1 + T C UCEC 51986477 + 51986457 51986497 41 CCTGGGAGCAGATGGGCCGTTACCGATGCACTGTGGAGAAC CCTGGGAGCAGATGGGCCGTCACCGATGCACTGTGGAGAAC Direct Loss 0.941945235994947 0 0.69160736 0 prediction 0.883890471989895 Functional Loss - CEACAM18 ENSG00000213822 CDS Human protein_coding chr19:51986477 chr19:51986477 nonsynonymous SNV 0.002 3 21 hPsi_associated_SNPs_2557 0 0 0 0 0 unknown 0.438041589922609 0 0.38321472 0 hPsi_site_598 iPseU_CNN:0.38321472;iRNA_PseU:0 599 chr1 248309163 248309163 1 + T C LUAD 248309163 + 248309143 248309183 41 GAGGGTCGTCGCAAAGCTTTTACTACCTGTTCCTCTCACCT GAGGGTCGTCGCAAAGCTTTCACTACCTGTTCCTCTCACCT Direct Loss 0.941755863065022 0 0.7815804 0 prediction 0.883511726130044 Functional Loss - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248309163 chr1:248309163 synonymous SNV . 0 21 hPsi_associated_SNPs_2558 0 0 0 0 0 unknown 0.438718640825719 0 0.5631608 0 hPsi_site_599 iPseU_CNN:0.5631608;iRNA_PseU:0 600 chr19 6177305 6177305 1 + T C CESC 6177305 + 6177285 6177325 41 GACAAGCATGAGACGGTGGTTAGCTACCTCCCACTCAGCCA GACAAGCATGAGACGGTGGTCAGCTACCTCCCACTCAGCCA Direct Loss 0.94174759816287 0 0.78029644 0 prediction 0.88349519632574 Functional Loss - ACSBG2 ENSG00000130377 CDS Human protein_coding chr19:6177305 chr19:6177305 synonymous SNV . 0 21 hPsi_associated_SNPs_2559 0 0 0 0 1 exosome 0.438757198771621 0 0.56059288 0 hPsi_site_600 iPseU_CNN:0.56059288;iRNA_PseU:0 601 chr19 51274070 51274070 1 + T C KIRP 51274070 + 51274050 51274090 41 CTGTGGATGACTGTCTTCCGTATGGCACGCACGGTCTCCAC CTGTGGATGACTGTCTTCCGCATGGCACGCACGGTCTCCAC Direct Loss 0.94165356786933 0 0.7046616 0 prediction 0.88330713573866 Functional Loss - GPR32 ENSG00000142511 CDS Human protein_coding chr19:51274070 chr19:51274070 synonymous SNV . 0 21 hPsi_associated_SNPs_2560 0 0 0 0 0 unknown 0.43871846711317 0 0.4093232 0 hPsi_site_601 iPseU_CNN:0.4093232;iRNA_PseU:0 602 chr19 48967891 48967891 1 + T C OV 48967891 + 48967871 48967911 41 GCTCTCTGACTGCATTTTGTTATGAGAATGAACTTGCTCTG GCTCTCTGACTGCATTTTGTCATGAGAATGAACTTGCTCTG Direct Loss 0.941633774809709 0 0.69300985 0 prediction 0.883267549619418 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967891 chr19:48967891 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2561 0 0 1 0 0 chromatin 0.438381198470302 0 0.3860197 0 hPsi_site_602 iPseU_CNN:0.3860197;iRNA_PseU:0 603 chr9 32634467 32634467 1 + T C rs17219559 32634467 + 32634447 32634487 41 ATCTTCGGAGACACCCAGCATATCATACCACAGTCGGGCAG ATCTTCGGAGACACCCAGCACATCATACCACAGTCGGGCAG Direct Loss 0.941589156170816 0 0.66249025 0 prediction 0.883178312341633 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634467 chr9:32634467 nonsynonymous SNV 0.914 2 21 hPsi_associated_SNPs_2562 0 0 0 0 0 exosome 0.438731021016981 0 0.3249805 0 hPsi_site_603 iPseU_CNN:0.3249805;iRNA_PseU:0 604 chr22 45132785 45132785 1 + T C rs6006865 45132785 + 45132765 45132805 41 GAGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTC GAGGGCGCGGCGGCCGGCGGCACCAGCATCCGCAGGCACTC Direct Loss 0.94158732366507 0 0.6675838 0 prediction 0.88317464733014 Functional Loss - PRR5 ENSG00000186654 CDS Human protein_coding chr22:45132785 chr22:45132785 synonymous SNV . 0 21 hPsi_associated_SNPs_2563 0 0 0 0 0 Cytosol 0.438720716009477 0 0.3351676 0 hPsi_site_604 iPseU_CNN:0.3351676;iRNA_PseU:0 605 chr1 25894846 25894846 1 + T C rs187759391 25894846 + 25894826 25894866 41 GACCAGCAGCAATCTGTCTTTAGAATCGCTTTCCTTCCTCC GACCAGCAGCAATCTGTCTTCAGAATCGCTTTCCTTCCTCC Direct Loss 0.941535511624628 0 0.76254207 0 prediction 0.883071023249256 Functional Loss - LDLRAP1 ENSG00000157978 UTR3 Human protein_coding chr1:25894846 chr1:25894846 . . 0 21 hPsi_associated_SNPs_2564 0 0 0 0 0 Ribosome 0.43871859576442 0 0.52508414 0 hPsi_site_605 iPseU_CNN:0.52508414;iRNA_PseU:0 606 chr11 125451166 125451166 1 + T C LIHC 125451166 + 125451146 125451186 41 ATTGGCCTTACTACTTTGGGTTTGGTTTGCCCTTGGCTTTT ATTGGCCTTACTACTTTGGGCTTGGTTTGCCCTTGGCTTTT Direct Loss 0.941520411046613 0 0.40414935 0 prediction 0.883040822093227 Functional Loss - EI24 ENSG00000149547 CDS Human protein_coding chr11:125451166 chr11:125451166 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_2565 0 0 1 0 2 Cytosol 0.438718166733499 0 0 0 hPsi_site_606 iPseU_CNN:0;iRNA_PseU:0 607 chr14 20344728 20344728 1 + T C LUAD 20344728 + 20344708 20344748 41 TGATGGCTGCCTTACCCAGATATTCTTTCTCCACCTTTTCA TGATGGCTGCCTTACCCAGACATTCTTTCTCCACCTTTTCA Direct Loss 0.941517582114023 0 0.3218708 0 prediction 0.883035164228046 Functional Loss - OR4K2 ENSG00000165762 CDS Human protein_coding chr14:20344728 chr14:20344728 nonsynonymous SNV 0.986 3 21 hPsi_associated_SNPs_2566 0 0 0 0 0 unknown 0.438718612087908 0 0 0 hPsi_site_607 iPseU_CNN:0;iRNA_PseU:0 608 chr15 59373233 59373233 1 + T C SKCM 59373233 + 59373213 59373253 41 AGCCTCCGCCTCAAGTGGATTATGTTATTCCTCATCCTGTA AGCCTCCGCCTCAAGTGGATCATGTTATTCCTCATCCTGTA Direct Loss 0.941492133469025 0 0.47926956 0 prediction 0.882984266938051 Functional Loss - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59373233 chr15:59373233 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2567 0 0 0 0 1 Ribosome 0.438718592995102 0 0 0 hPsi_site_608 iPseU_CNN:0;iRNA_PseU:0 609 chr9 100823142 100823142 1 + T C UCEC 100823142 + 100823122 100823162 41 GGAAAGCCTTGGAGAGGCCATACACCTCGAAGCATTCCTGG GGAAAGCCTTGGAGAGGCCACACACCTCGAAGCATTCCTGG Direct Loss 0.941483263250421 0 0.37245578 0 prediction 0.882966526500842 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100823142 chr9:100823142 nonsynonymous SNV 0.939 2 21 hPsi_associated_SNPs_2568 0 0 1 0 1 Ribosome 0.43871537615568 0 0 0 hPsi_site_609 iPseU_CNN:0;iRNA_PseU:0 610 chr13 88329969 88329969 1 + T C STAD 88329969 + 88329949 88329989 41 AGGGCAACTCCGTAGAGGATTACAAAGACCTGCACGAGCTC AGGGCAACTCCGTAGAGGATCACAAAGACCTGCACGAGCTC Direct Loss 0.941457995292147 0 0.7897327 0 prediction 0.882915990584295 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329969 chr13:88329969 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2569 0 0 1 0 0 nucleus 0.43880018861437 0 0.5794654 0 hPsi_site_610 iPseU_CNN:0.5794654;iRNA_PseU:0 611 chr7 99722182 99722182 1 + T C HNSC 99722182 + 99722162 99722202 41 AAGACATTGTGGGAGACTGGTACTTCCACCATCAGGAGCAG AAGACATTGTGGGAGACTGGCACTTCCACCATCAGGAGCAG Direct Loss 0.941439656591051 0 0.64718705 0 prediction 0.882879313182102 Functional Loss - CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99722182 chr7:99722182 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2570 0 0 1 0 1 Endoplasmic reticulum 0.438718418662618 0 0.2943741 0 hPsi_site_611 iPseU_CNN:0.2943741;iRNA_PseU:0 612 chr17 33331325 33331325 1 + T C COAD 33331325 + 33331305 33331345 41 TCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCACACCA TCTTCACTGGGGTGCGGCTTCACTTGCCACCCTCCACACCA Direct Loss 0.941412309104083 0 0.8907047 0 prediction 0.882824618208166 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33331325 chr17:33331325 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_2571 0 0 1 0 1 Cytosol 0.438718648242065 0 0.7814094 0 hPsi_site_612 iPseU_CNN:0.7814094;iRNA_PseU:0 613 chr1 248551760 248551760 1 + T C COAD 248551760 + 248551740 248551780 41 TTATACCATCCTCACACCCTTATTAAACCCTCTCATCTACA TTATACCATCCTCACACCCTCATTAAACCCTCTCATCTACA Direct Loss 0.9413789163907 0 0.45243698 0 prediction 0.882757832781401 Functional Loss - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551760 chr1:248551760 nonsynonymous SNV 0.851 1 21 hPsi_associated_SNPs_2572 0 0 0 0 0 unknown 0.438718491717423 0 0 0 hPsi_site_613 iPseU_CNN:0;iRNA_PseU:0 614 chr16 78064588 78064588 1 + T A rs112982159 78064588 + 78064568 78064608 41 GTTGACGTCAACGGAATCGCTATCTCCTTCCTCAACTGGGA GTTGACGTCAACGGAATCGCAATCTCCTTCCTCAACTGGGA Direct Loss 0.941366317334123 0 0.67199105 0 prediction 0.882732634668245 Functional Loss - CLEC3A ENSG00000166509 CDS Human protein_coding chr16:78064588 chr16:78064588 synonymous SNV . 0 21 hPsi_associated_SNPs_2573 0 0 0 0 0 unknown 0.438718592990453 0 0.3439821 0 hPsi_site_614 iPseU_CNN:0.3439821;iRNA_PseU:0 615 chr6 10728944 10728944 1 + T G rs112936888 10728944 + 10728924 10728964 41 GAAAATTCATGCCTGCAGGTTTAATTGCAGGTGCCAGGTAC GAAAATTCATGCCTGCAGGTGTAATTGCAGGTGCCAGGTAC Direct Loss 0.941308885097686 0 0.5705809 0 prediction 0.882617770195372 Functional Loss - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10728944 chr6:10728944 nonsynonymous SNV 0.993 1 21 hPsi_associated_SNPs_2574 0 0 1 0 2 Ribosome 0.43871692307057 0 0.1411618 0 hPsi_site_615 iPseU_CNN:0.1411618;iRNA_PseU:0 616 chr14 101512824 101512824 1 + T C UCEC 101512824 + 101512804 101512844 41 GAGTGGTTATCCCTGTCCTGTTCGTTTTGCTCATGTCGAAT GAGTGGTTATCCCTGTCCTGCTCGTTTTGCTCATGTCGAAT Direct Loss 0.941271387287174 0 0.6013726 0 prediction 0.882542774574348 Functional Loss - MIR487B ENSG00000207754 ncRNA_exonic Human miRNA chr14:101512824 chr14:101512824 . . 0 21 hPsi_associated_SNPs_2575 0 0 0 0 0 unknown 0.438717714196579 0 0.2027452 0 hPsi_site_616 iPseU_CNN:0.2027452;iRNA_PseU:0 617 chr17 72301432 72301432 1 + A C rs8073660 72301432 - 72301412 72301452 41 GGGAAGGTGCACACAATCTTTTCAGCTGACGTCTTGGCCTT GGGAAGGTGCACACAATCTTGTCAGCTGACGTCTTGGCCTT Direct Loss 0.941258172527865 0 0.56155676 0 prediction 0.882516345055731 Functional Loss - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72301432 chr17:72301432 nonsynonymous SNV 0.866 1 21 hPsi_associated_SNPs_2576 0 0 0 0 0 exosome 0.438727281437641 0 0.12311352 0 hPsi_site_617 iPseU_CNN:0.12311352;iRNA_PseU:0 618 chr11 473919 473919 1 + T G UCEC 473919 + 473899 473939 41 ATTGTGGCCAGTATTTTGGTTTTCTTATGTTTTGGAGTCAC ATTGTGGCCAGTATTTTGGTGTTCTTATGTTTTGGAGTCAC Direct Loss 0.941241814264036 0 0.40131256 0 prediction 0.882483628528073 Functional Loss - PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:473919 chr11:473919 synonymous SNV . 0 21 hPsi_associated_SNPs_2577 0 0 0 0 2 Ribosome 0.454340688006619 0 0 0 hPsi_site_618 iPseU_CNN:0;iRNA_PseU:0 619 chr17 6917003 6917003 1 + T C UCEC 6917003 + 6916983 6917023 41 AGATAATGCTCGGAATATTTTTCAATGTCCATTCCGCTGTG AGATAATGCTCGGAATATTTCTCAATGTCCATTCCGCTGTG Direct Loss 0.941213896860165 0 0.5291949 0 prediction 0.88242779372033 Functional Loss - RNASEK ENSG00000219200;ENSG00000269871 CDS Human other chr17:6917003 chr17:6917003 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2578 0 0 1 0 2 cytosol 0.438533153199899 0 0.0583898 0 hPsi_site_619 iPseU_CNN:0.0583898;iRNA_PseU:0 620 chr17 21731315 21731315 1 + T C COAD 21731315 + 21731295 21731335 41 AAGCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACAT AAGCAGCTGGAAGATGGCGGCACTCTTTCTGACTACAACAT Direct Loss 0.941179630480147 0 0.921203 0 prediction 0.882359260960295 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731315 chr17:21731315 nonsynonymous SNV 0.963 0 21 hPsi_associated_SNPs_2579 0 0 1 0 0 Ribosome 0.438695909084647 0 0.842406 0 hPsi_site_620 iPseU_CNN:0.842406;iRNA_PseU:0 621 chr19 30313197 30313197 1 + T C rs200858398 30313197 + 30313177 30313217 41 TGCCTTGAATTTCCTTATGGTATACTTGCTGCTTCGGCCTT TGCCTTGAATTTCCTTATGGCATACTTGCTGCTTCGGCCTT Direct Loss 0.941172676576791 0 0.4535945 0 prediction 0.882345353153582 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313197 chr19:30313197 synonymous SNV . 0 21 hPsi_associated_SNPs_2580 0 0 0 0 2 Ribosome 0.438718592955887 0 0 0 hPsi_site_621 iPseU_CNN:0;iRNA_PseU:0 622 chr22 39357586 39357586 1 + T C rs1065183 39357586 + 39357566 39357606 41 AACACACACGTGAGACTGCGTATCTTCGCTGCCCGCATCTA AACACACACGTGAGACTGCGCATCTTCGCTGCCCGCATCTA Direct Loss 0.941167054421616 0 0.5763704 0 prediction 0.882334108843231 Functional Loss - APOBEC3A;APOBEC3A_B ENSG00000128383 CDS Human protein_coding chr22:39357586 chr22:39357586 synonymous SNV . 0 21 hPsi_associated_SNPs_2581 0 0 0 0 0 unknown 0.4392261915216 0 0.1527408 0 hPsi_site_622 iPseU_CNN:0.1527408;iRNA_PseU:0 623 chr3 51897216 51897216 1 + T C BRCA 51897216 + 51897196 51897236 41 CAGTGATCAAGCTCCAGTCTTTGGTCCGTATGTGGCGTGTC CAGTGATCAAGCTCCAGTCTCTGGTCCGTATGTGGCGTGTC Direct Loss 0.941156834266044 0 0.39935416 0 prediction 0.882313668532089 Functional Loss - IQCF2 ENSG00000184345 CDS Human protein_coding chr3:51897216 chr3:51897216 synonymous SNV . 0 21 hPsi_associated_SNPs_2582 0 0 0 0 0 unknown 0.440574328140081 0 0 0 hPsi_site_623 iPseU_CNN:0;iRNA_PseU:0 624 chr2 8824193 8824193 1 + T G rs543520892 8824193 + 8824173 8824213 41 GGATCCAGTATTCAGTCACTTAAATGAAGTCTTTTGGTCAG GGATCCAGTATTCAGTCACTGAAATGAAGTCTTTTGGTCAG Direct Loss 0.941075873709982 0 0.48118514 0 prediction 0.882151747419965 Functional Loss - ID2 ENSG00000115738 UTR3 Human protein_coding chr2:8824193 chr2:8824193 . . 0 21 hPsi_associated_SNPs_2583 0 0 1 2 0 Endoplasmic reticulum 0.43871838445997 0 0 0 hPsi_site_624 iPseU_CNN:0;iRNA_PseU:0 625 chr3 128998687 128998687 1 + T C PAAD 128998687 + 128998667 128998707 41 AGTGGAGGGACCCTGATAAGTACTGCCCCTCTTACAACAAG AGTGGAGGGACCCTGATAAGCACTGCCCCTCTTACAACAAG Direct Loss 0.941074809284133 0 0.7753874 0 prediction 0.882149618568265 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:128998687 chr3:128998687 nonsynonymous SNV 0.777 4 21 hPsi_associated_SNPs_2584 0 0 1 0 1 Ribosome 0.438718592994899 0 0.5507748 0 hPsi_site_625 iPseU_CNN:0.5507748;iRNA_PseU:0 626 chr1 38274776 38274776 1 + T C LIHC 38274776 + 38274756 38274796 41 GCAGAATACCCTGACTTCTCTCCCTCCCCAGGGCCGGTGGC GCAGAATACCCTGACTTCTCCCCCTCCCCAGGGCCGGTGGC Direct Loss 0.941064413636395 0 0.32412788 0 prediction 0.882128827272789 Functional Loss - C1orf122 ENSG00000197982 CDS Human protein_coding chr1:38274776 chr1:38274776 synonymous SNV . 0 21 hPsi_associated_SNPs_2585 0 0 1 1 0 Ribosome 0.438718592995108 0 0 0 hPsi_site_626 iPseU_CNN:0;iRNA_PseU:0 627 chr17 51901612 51901612 1 + A G STAD 51901612 - 51901592 51901632 41 GAAGTCCGACAGCTATTCCCTATTTCCACCAGGTTCAGCAC GAAGTCCGACAGCTATTCCCCATTTCCACCAGGTTCAGCAC Direct Loss 0.941061693386513 0 0.4754516 0 prediction 0.882123386773027 Functional Loss - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901612 chr17:51901612 nonsynonymous SNV 0.105 0 21 hPsi_associated_SNPs_2586 0 0 1 0 0 exosome 0.438725793162573 0 0 0 hPsi_site_627 iPseU_CNN:0;iRNA_PseU:0 628 chr2 242811994 242811994 1 + T C LUSC 242811994 + 242811974 242812014 41 CCAGGACGTCTGGGTTCTGCTACCTGAGCACAGCCTGGTCC CCAGGACGTCTGGGTTCTGCCACCTGAGCACAGCCTGGTCC Direct Loss 0.940881561156449 0 0.72898555 0 prediction 0.881763122312899 Functional Loss - RTP5 ENSG00000188011 CDS Human protein_coding chr2:242811994 chr2:242811994 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_2587 0 0 0 0 1 exosome 0.438718593011355 0 0.4579711 0 hPsi_site_628 iPseU_CNN:0.4579711;iRNA_PseU:0 629 chr12 55615166 55615166 1 + T C UCEC 55615166 + 55615146 55615186 41 TCCTTCTCTCCATGATGGCTTATGATCGCTTTGTGGCCATC TCCTTCTCTCCATGATGGCTCATGATCGCTTTGTGGCCATC Direct Loss 0.940868475557947 0 0.6588021 0 prediction 0.881736951115893 Functional Loss - OR10A7 ENSG00000179919 CDS Human protein_coding chr12:55615166 chr12:55615166 nonsynonymous SNV 0.977 3 21 hPsi_associated_SNPs_2588 0 0 0 0 0 unknown 0.439439945089084 0 0.3176042 0 hPsi_site_629 iPseU_CNN:0.3176042;iRNA_PseU:0 630 chr7 143701858 143701858 1 + T C LUAD 143701858 + 143701838 143701878 41 ATTCAGCCATTATTTTCATGTATGCTCGACCTCGAGTTATC ATTCAGCCATTATTTTCATGCATGCTCGACCTCGAGTTATC Direct Loss 0.940865245370183 0 0.39064267 0 prediction 0.881730490740365 Functional Loss - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701858 chr7:143701858 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2589 0 0 0 0 0 unknown 0.437834101850465 0 0 0 hPsi_site_630 iPseU_CNN:0;iRNA_PseU:0 631 chr14 20825922 20825922 1 + T A LUSC 20825922 + 20825902 20825942 41 GGTCCGTATGCGGTACCTTTTAAAGGTTCAGTTTAATTTCC GGTCCGTATGCGGTACCTTTAAAAGGTTCAGTTTAATTTCC Direct Loss 0.940854455866371 0 0.5859021 0 prediction 0.881708911732742 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20825922 chr14:20825922 stopgain 0.998 1 21 hPsi_associated_SNPs_2590 0 0 1 0 0 Cytosol 0.438718592999501 0 0.1718042 0 hPsi_site_631 iPseU_CNN:0.1718042;iRNA_PseU:0 632 chr4 48037767 48037767 1 + T A SKCM 48037767 + 48037747 48037787 41 TGATAGAATGGAAGCCAGTTTACAAACATCCGCTGGTCTTT TGATAGAATGGAAGCCAGTTAACAAACATCCGCTGGTCTTT Direct Loss 0.940805747595394 0 0.65144074 0 prediction 0.881611495190789 Functional Loss - NIPAL1 ENSG00000163293 CDS Human protein_coding chr4:48037767 chr4:48037767 nonsynonymous SNV 0.866 3 21 hPsi_associated_SNPs_2591 0 0 1 0 0 Ribosome 0.438718593350845 0 0.30288148 0 hPsi_site_632 iPseU_CNN:0.30288148;iRNA_PseU:0 633 chr4 48036991 48036991 1 + T C COAD 48036991 + 48036971 48037011 41 TTGGGGTCAACTGTGATGGTTATCCATGCCCCACAAGAAGA TTGGGGTCAACTGTGATGGTCATCCATGCCCCACAAGAAGA Direct Loss 0.940767780662687 0 0.40202177 0 prediction 0.881535561325374 Functional Loss - NIPAL1 ENSG00000163293 CDS Human protein_coding chr4:48036991 chr4:48036991 synonymous SNV . 0 21 hPsi_associated_SNPs_2592 0 0 0 0 2 Ribosome 0.438721058541575 0 0 0 hPsi_site_633 iPseU_CNN:0;iRNA_PseU:0 634 chr2 86831231 86831231 1 + T C GBM 86831231 + 86831211 86831251 41 CCATATCTTCATTAGTGTTATATGATCCATATGACCTCCCC CCATATCTTCATTAGTGTTACATGATCCATATGACCTCCCC Direct Loss 0.940641381897178 0 0.32459304 0 prediction 0.881282763794356 Functional Loss - RNF103 ENSG00000239305 CDS Human protein_coding chr2:86831231 chr2:86831231 nonsynonymous SNV 0.979 0 21 hPsi_associated_SNPs_2593 0 0 0 0 0 Ribosome 0.438719043084209 0 0 0 hPsi_site_634 iPseU_CNN:0;iRNA_PseU:0 635 chr7 6639834 6639834 1 + T G KIRP 6639834 + 6639814 6639854 41 GGCGCCTGGGGCTGATCCTCTTCGACCACATGGTCCCGCTG GGCGCCTGGGGCTGATCCTCGTCGACCACATGGTCCCGCTG Direct Loss 0.940634237369699 0 0.7059081 0 prediction 0.881268474739397 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6639834 chr7:6639834 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_2594 0 0 0 0 1 chromatin 0.43753716772635 0 0.4118162 0 hPsi_site_635 iPseU_CNN:0.4118162;iRNA_PseU:0 636 chr19 50207994 50207994 1 + T C rs144205321 50207994 + 50207974 50208014 41 ACTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCG ACTGGTGGGAGGAATTTGTGCACCTGCGCTCCCGAAATCCG Direct Loss 0.940621940768807 0 0.6688544 0 prediction 0.881243881537613 Functional Loss - CPT1C ENSG00000169169 CDS Human protein_coding chr19:50207994 chr19:50207994 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2595 0 0 0 0 2 exosome 0.438661367853767 0 0.3377088 0 hPsi_site_636 iPseU_CNN:0.3377088;iRNA_PseU:0 637 chr2 27351948 27351948 1 + T A rs6715286 27351948 + 27351928 27351968 41 ATCACTGGCAGTAGCCAGGATACATACGTCTTGCACCTAGT ATCACTGGCAGTAGCCAGGAAACATACGTCTTGCACCTAGT Direct Loss 0.940614631829859 0 0.930488 0 prediction 0.881229263659718 Functional Loss - ABHD1 ENSG00000143994 CDS Human protein_coding chr2:27351948 chr2:27351948 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2596 0 0 0 1 1 exosome 0.438718615430576 0 0.860976 0 hPsi_site_637 iPseU_CNN:0.860976;iRNA_PseU:0 638 chr1 156706426 156706426 1 + T A COAD 156706426 + 156706406 156706446 41 TTAAGCCCTTTCTCCCAGGTTTCCATGCTGAGCTCCTGCCC TTAAGCCCTTTCTCCCAGGTATCCATGCTGAGCTCCTGCCC Direct Loss 0.940598015503032 0 0.34832615 0 prediction 0.881196031006064 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156706426 chr1:156706426 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2597 0 0 0 0 1 chromatin 0.438718593993856 0 0 0 hPsi_site_638 iPseU_CNN:0;iRNA_PseU:0 639 chrX 150348881 150348881 1 + T C PRAD 150348881 + 150348861 150348901 41 GCAAGATCCCCAACTGGCTTTATCTTGCAGCCTACTTCATA GCAAGATCCCCAACTGGCTTCATCTTGCAGCCTACTTCATA Direct Loss 0.940563936282513 0 0.5963979 0 prediction 0.881127872565025 Functional Loss - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150348881 chrX:150348881 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2598 0 0 0 0 0 exosome 0.438667225707873 0 0.1927958 0 hPsi_site_639 iPseU_CNN:0.1927958;iRNA_PseU:0 640 chr16 86602485 86602485 1 + T G rs199552394 86602485 + 86602465 86602505 41 CCTCCCCGGCCCGCTCCGGCTTCGCTTCCCAGCCCCGACCC CCTCCCCGGCCCGCTCCGGCGTCGCTTCCCAGCCCCGACCC Direct Loss 0.940558827481464 0 0.63238895 0 prediction 0.881117654962928 Functional Loss - FOXC2 ENSG00000176692 UTR3 Human protein_coding chr16:86602485 chr16:86602485 . . 0 21 hPsi_associated_SNPs_2599 0 0 0 0 0 exosome 0.438718655897646 0 0.2647779 0 hPsi_site_640 iPseU_CNN:0.2647779;iRNA_PseU:0 641 chr7 99631376 99631376 1 + T C rs61736362 99631376 + 99631356 99631396 41 TGTGGGAAAGCCTTCAGTCTTAACTCCAACCTTGTCCTGCA TGTGGGAAAGCCTTCAGTCTCAACTCCAACCTTGTCCTGCA Direct Loss 0.940556292469954 0 0.5645635 0 prediction 0.881112584939908 Functional Loss - ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99631376 chr7:99631376 synonymous SNV . 0 21 hPsi_associated_SNPs_2600 0 0 1 0 0 Cytosol 0.438718588312574 0 0.129127 0 hPsi_site_641 iPseU_CNN:0.129127;iRNA_PseU:0 642 chr6 44198360 44198360 1 + T C CESC 44198360 + 44198340 44198380 41 TTTATCACAGCCTGTGCTGTTATCATTTTGACCATCATCTG TTTATCACAGCCTGTGCTGTCATCATTTTGACCATCATCTG Direct Loss 0.940538091390312 0 0.7105743 0 prediction 0.881076182780625 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44198360 chr6:44198360 synonymous SNV . 0 21 hPsi_associated_SNPs_2601 0 0 1 0 2 Endoplasmic reticulum 0.438000089808723 0 0.4211486 0 hPsi_site_642 iPseU_CNN:0.4211486;iRNA_PseU:0 643 chr14 51370849 51370849 1 + T C rs7154732 51370849 + 51370829 51370869 41 AGAGGGTCAAGATGGTTATCTTTCCTCCTGGCTTCCAACAC AGAGGGTCAAGATGGTTATCCTTCCTCCTGGCTTCCAACAC Direct Loss 0.940460638389679 0 0.3132005 0 prediction 0.880921276779358 Functional Loss - ABHD12B ENSG00000131969 CDS Human protein_coding chr14:51370849 chr14:51370849 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_2602 0 0 0 0 2 Ribosome 0.438718585932547 0 0 0 hPsi_site_643 iPseU_CNN:0;iRNA_PseU:0 644 chr17 8029087 8029087 1 + T A rs377519668 8029087 + 8029067 8029107 41 TTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAG TTGGTGGTTCAGTGGTAGAAATCTCGCCTGCCACGCGGGAG Direct Loss 0.940455617427882 0 0.7059498 0 prediction 0.880911234855763 Functional Loss - HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029087 chr17:8029087 . . 0 21 hPsi_associated_SNPs_2603 0 0 1 0 0 unknown 0.42859285714147 0 0.4118996 0 hPsi_site_644 iPseU_CNN:0.4118996;iRNA_PseU:0 645 chr12 108956417 108956417 1 + T G rs10778647 108956417 + 108956397 108956437 41 AGATGGCGGCGGCTGGGGCTTTCCGTCTGAGGCGGGCGGCA AGATGGCGGCGGCTGGGGCTGTCCGTCTGAGGCGGGCGGCA Direct Loss 0.940417281287637 0 0.43560833 0 prediction 0.880834562575274 Functional Loss - ISCU ENSG00000136003 CDS Human protein_coding chr12:108956417 chr12:108956417 nonsynonymous SNV 0.407 0 21 hPsi_associated_SNPs_2604 0 0 1 0 1 Cytosol 0.438715832654919 0 0 0 hPsi_site_645 iPseU_CNN:0;iRNA_PseU:0 646 chr19 10398364 10398364 1 + T C SKCM 10398364 + 10398344 10398384 41 ATTCCGAAAGCCTGGAGCGCTTCACCGGCCTGGATCTGGCC ATTCCGAAAGCCTGGAGCGCCTCACCGGCCTGGATCTGGCC Direct Loss 0.940416654991793 0 0.8210926 0 prediction 0.880833309983585 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398364 chr19:10398364 nonsynonymous SNV 0.198 1 21 hPsi_associated_SNPs_2605 0 0 1 0 1 Endoplasmic reticulum 0.438708584559057 0 0.6421852 0 hPsi_site_646 iPseU_CNN:0.6421852;iRNA_PseU:0 647 chr2 176973721 176973721 1 + T C UCEC 176973721 + 176973701 176973741 41 GCGAGTTTTTCTTTAACGTGTACATAAACAAAGAGAAAAGA GCGAGTTTTTCTTTAACGTGCACATAAACAAAGAGAAAAGA Direct Loss 0.940373443293525 0 0.54052424 0 prediction 0.88074688658705 Functional Loss - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973721 chr2:176973721 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2606 0 0 1 0 1 exosome 0.439090202161197 0 0.08104848 0 hPsi_site_647 iPseU_CNN:0.08104848;iRNA_PseU:0 648 chr2 55462635 55462635 1 + T C LUAD 55462635 + 55462615 55462655 41 GAATGTGGTGCTGGGGTGTTTATGGCAAGTCACTTTGACAG GAATGTGGTGCTGGGGTGTTCATGGCAAGTCACTTTGACAG Direct Loss 0.940364420013389 0 0.46455798 0 prediction 0.880728840026777 Functional Loss - RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462635 chr2:55462635 synonymous SNV . 0 21 hPsi_associated_SNPs_2607 0 0 1 8 1 Ribosome 0.438715627950767 0 0 0 hPsi_site_648 iPseU_CNN:0;iRNA_PseU:0 649 chr19 9938567 9938567 1 + T C rs114327525 9938567 + 9938547 9938587 41 GGGCTTCCGGCCTCGAACTTTAACTTCCGCTTCCGGTTCCT GGGCTTCCGGCCTCGAACTTCAACTTCCGCTTCCGGTTCCT Direct Loss 0.940357451593831 0 0.7374614 0 prediction 0.880714903187661 Functional Loss - UBL5 ENSG00000127452;ENSG00000198258 upstream Human other chr19:9938567 chr19:9938567 . . 0 21 hPsi_associated_SNPs_2608 0 0 1 0 1 Ribosome 0.438718594508715 0 0.4749228 0 hPsi_site_649 iPseU_CNN:0.4749228;iRNA_PseU:0 650 chr11 49974682 49974682 1 + T A HNSC 49974682 + 49974662 49974702 41 GCAAGGCACGAAGCCCTCTCTACCTGTGTCTCCCACATCAC GCAAGGCACGAAGCCCTCTCAACCTGTGTCTCCCACATCAC Direct Loss 0.940336476028739 0 0.62793905 0 prediction 0.880672952057479 Functional Loss - OR4C13 ENSG00000258817 CDS Human protein_coding chr11:49974682 chr11:49974682 synonymous SNV . 0 21 hPsi_associated_SNPs_2609 0 0 0 0 0 unknown 0.438762296861657 0 0.2558781 0 hPsi_site_650 iPseU_CNN:0.2558781;iRNA_PseU:0 651 chr7 143772084 143772084 1 + T C UCEC 143772084 + 143772064 143772104 41 ATGGCACAGCCATCATCATGTATGTTGAGCCCCAGTATGAG ATGGCACAGCCATCATCATGCATGTTGAGCCCCAGTATGAG Direct Loss 0.940329025641628 0 0.553869 0 prediction 0.880658051283256 Functional Loss - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143772084 chr7:143772084 nonsynonymous SNV 0.649 3 21 hPsi_associated_SNPs_2610 0 0 0 0 0 unknown 0.439128961706192 0 0.107738 0 hPsi_site_651 iPseU_CNN:0.107738;iRNA_PseU:0 652 chr11 67378929 67378929 1 + T G OV 67378929 + 67378909 67378949 41 GTGATCCCTGGCGGCTCGTCTACCCCACTGATCCCCAAGTC GTGATCCCTGGCGGCTCGTCGACCCCACTGATCCCCAAGTC Direct Loss 0.940305842041485 0 0.7434571 0 prediction 0.880611684082971 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378929 chr11:67378929 synonymous SNV . 0 21 hPsi_associated_SNPs_2611 0 0 1 0 1 Ribosome 0.438724960308696 0 0.4869142 0 hPsi_site_652 iPseU_CNN:0.4869142;iRNA_PseU:0 653 chr3 101395663 101395663 1 + T G STAD 101395663 + 101395643 101395683 41 CAGGCGGCAGCTTTTCGGATTTTACGCTTGACATTGCCCTC CAGGCGGCAGCTTTTCGGATGTTACGCTTGACATTGCCCTC Direct Loss 0.940305422848258 0 0.63165295 0 prediction 0.880610845696516 Functional Loss - ZBTB11 ENSG00000066422 CDS Human protein_coding chr3:101395663 chr3:101395663 nonsynonymous SNV 0.981 2 21 hPsi_associated_SNPs_2612 0 0 1 0 0 Nucleus 0.438718592995292 0 0.2633059 0 hPsi_site_653 iPseU_CNN:0.2633059;iRNA_PseU:0 654 chr9 70918880 70918880 1 + T C UCEC 70918880 + 70918860 70918900 41 CAAGGGGTCAGGGGAGCGGGTACAGGGGCTGCGCAGAATTT CAAGGGGTCAGGGGAGCGGGCACAGGGGCTGCGCAGAATTT Direct Loss 0.940301715273126 0 0.73011774 0 prediction 0.880603430546252 Functional Loss - FOXD4L3 ENSG00000187559 CDS Human protein_coding chr9:70918880 chr9:70918880 nonsynonymous SNV 0.022 1 21 hPsi_associated_SNPs_2613 0 0 0 0 0 exosome 0.43871859281896 0 0.46023548 0 hPsi_site_654 iPseU_CNN:0.46023548;iRNA_PseU:0 655 chr5 76348570 76348570 1 + T A BRCA 76348570 + 76348550 76348590 41 TTGACCATGACTTACAAAGTTATGTCCTTGTGGATCAAGGC TTGACCATGACTTACAAAGTAATGTCCTTGTGGATCAAGGC Direct Loss 0.940279436916285 0 0.56083024 0 prediction 0.88055887383257 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76348570 chr5:76348570 nonsynonymous SNV 0.996 5 21 hPsi_associated_SNPs_2614 0 0 1 0 2 Ribosome 0.438718566678274 0 0.12166048 0 hPsi_site_655 iPseU_CNN:0.12166048;iRNA_PseU:0 656 chr19 4792718 4792718 1 + A C UCEC 4792718 - 4792698 4792738 41 GGACAGCAGCTTTCGTAAGATTCCCCGTTCAGTGGTTCCTC GGACAGCAGCTTTCGTAAGAGTCCCCGTTCAGTGGTTCCTC Direct Loss 0.940251334324166 0 0.47181872 0 prediction 0.880502668648332 Functional Loss - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4792718 chr19:4792718 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_2615 0 0 0 0 0 Ribosome 0.438662411818733 0 0 0 hPsi_site_656 iPseU_CNN:0;iRNA_PseU:0 657 chr17 64876733 64876733 1 + T C SKCM 64876733 + 64876713 64876753 41 TCTTCTTCATGTTCATTGGGTTTATCCTGAACAACATCGGA TCTTCTTCATGTTCATTGGGCTTATCCTGAACAACATCGGA Direct Loss 0.940226114660757 0 0.57274187 0 prediction 0.880452229321514 Functional Loss - CACNG5 ENSG00000075429 CDS Human protein_coding chr17:64876733 chr17:64876733 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2616 0 0 0 0 2 unknown 0.435088056419735 0 0.14548374 0 hPsi_site_657 iPseU_CNN:0.14548374;iRNA_PseU:0 658 chr17 4440925 4440925 1 + T C rs76224255 4440925 + 4440905 4440945 41 GAAGAGGCTGTGTCCTCAGTTACCCTGGAAGGATGTGTGTG GAAGAGGCTGTGTCCTCAGTCACCCTGGAAGGATGTGTGTG Direct Loss 0.940222552434199 0 0.2588845 0 prediction 0.880445104868399 Functional Loss - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4440925 chr17:4440925 synonymous SNV . 0 21 hPsi_associated_SNPs_2617 0 0 0 0 0 Ribosome 0.456277001616534 0 0 0 hPsi_site_658 iPseU_CNN:0;iRNA_PseU:0 659 chr12 132589773 132589773 1 + T C COAD 132589773 + 132589753 132589793 41 GGAGAGACTGTATGGACCATTACAAGCATATCTTAGGCAGA GGAGAGACTGTATGGACCATCACAAGCATATCTTAGGCAGA Direct Loss 0.940197161868968 0 0.29474837 0 prediction 0.880394323737935 Functional Loss - EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589773 chr12:132589773 nonsynonymous SNV 0.420 3 21 hPsi_associated_SNPs_2618 0 0 1 0 0 chromatin 0.438707798659768 0 0 0 hPsi_site_659 iPseU_CNN:0;iRNA_PseU:0 660 chr7 150932236 150932236 1 + T C SKCM 150932236 + 150932216 150932256 41 TTGGCCGTGGCTGTGAACCGTACGGTGGCCCATCACTTCCC TTGGCCGTGGCTGTGAACCGCACGGTGGCCCATCACTTCCC Direct Loss 0.9401962774778 0 0.8629098 0 prediction 0.880392554955599 Functional Loss - CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150932236 chr7:150932236 synonymous SNV . 0 21 hPsi_associated_SNPs_2619 0 0 1 0 0 Nucleus 0.438696573546061 0 0.7258196 0 hPsi_site_660 iPseU_CNN:0.7258196;iRNA_PseU:0 661 chr10 69524357 69524357 1 + T A rs367628342 69524357 + 69524337 69524377 41 GCTGCGGAAGCGGGTGCTCTTATTTTTTCTATTTTTTTAAA GCTGCGGAAGCGGGTGCTCTAATTTTTTCTATTTTTTTAAA Direct Loss 0.940169167693677 0 0.44426045 0 prediction 0.880338335387353 Functional Loss - CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524357 chr10:69524357 . . 0 21 hPsi_associated_SNPs_2620 0 0 1 0 0 unknown 0.438718592995103 0 0 0 hPsi_site_661 iPseU_CNN:0;iRNA_PseU:0 662 chr21 33887459 33887459 1 + T A UCEC 33887459 + 33887439 33887479 41 AAATATGGATGAACAGTGGTTTGGACACCTCGCTCCCAAGA AAATATGGATGAACAGTGGTATGGACACCTCGCTCCCAAGA Direct Loss 0.940110370159244 0 0.6910008 0 prediction 0.880220740318487 Functional Loss - EVA1C ENSG00000166979 CDS Human protein_coding chr21:33887459 chr21:33887459 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2621 0 0 0 2 0 Ribosome 0.438716615062456 0 0.3820016 0 hPsi_site_662 iPseU_CNN:0.3820016;iRNA_PseU:0 663 chr17 70118942 70118942 1 + T C COAD 70118942 + 70118922 70118962 41 ACAAGAAGGACCACCCGGATTACAAGTACCAGCCGCGGCGG ACAAGAAGGACCACCCGGATCACAAGTACCAGCCGCGGCGG Direct Loss 0.940107952669452 0 0.48557696 0 prediction 0.880215905338904 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70118942 chr17:70118942 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2622 0 0 1 0 1 Cytosol 0.438679817655845 0 0 0 hPsi_site_663 iPseU_CNN:0;iRNA_PseU:0 664 chr1 71532487 71532487 1 + T C LUAD 71532487 + 71532467 71532507 41 TGACCGTGATCTTGTTCGTCTTTTTTTGCGATCACCAGATG TGACCGTGATCTTGTTCGTCCTTTTTTGCGATCACCAGATG Direct Loss 0.940088218986934 0 0.43325967 0 prediction 0.880176437973867 Functional Loss - ZRANB2 ENSG00000132485 CDS Human protein_coding chr1:71532487 chr1:71532487 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2623 0 0 0 0 1 Nucleus 0.438347911013687 0 0 0 hPsi_site_664 iPseU_CNN:0;iRNA_PseU:0 665 chr11 74716632 74716632 1 + T G LUAD 74716632 + 74716612 74716652 41 GGAATGCTGCCCGCCTTTGCTTCATCTACAGTCAGGATGCT GGAATGCTGCCCGCCTTTGCGTCATCTACAGTCAGGATGCT Direct Loss 0.940079811216118 0 0.3018638 0 prediction 0.880159622432236 Functional Loss - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74716632 chr11:74716632 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_2624 0 0 1 0 0 Nucleus 0.438718594363952 0 0 0 hPsi_site_665 iPseU_CNN:0;iRNA_PseU:0 666 chr11 60689491 60689491 1 + T C STAD 60689491 + 60689471 60689511 41 TCCTGGCCTTGCTGATCCTCTACGCCCTGCTGAGCCGGCTC TCCTGGCCTTGCTGATCCTCCACGCCCTGCTGAGCCGGCTC Direct Loss 0.940055590659392 0 0.6344763 0 prediction 0.880111181318784 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689491 chr11:60689491 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_2625 0 0 1 0 0 Ribosome 0.438726060496857 0 0.2689526 0 hPsi_site_666 iPseU_CNN:0.2689526;iRNA_PseU:0 667 chr16 613451 613451 1 + T A SKCM 613451 + 613431 613471 41 GCCTGGAGAAGTCACACCTCTACAACCACATGAAGTACAGC GCCTGGAGAAGTCACACCTCAACAACCACATGAAGTACAGC Direct Loss 0.940040746236078 0 0.38570815 0 prediction 0.880081492472156 Functional Loss - PRR35 ENSG00000161992 CDS Human protein_coding chr16:613451 chr16:613451 nonsynonymous SNV 0.963 4 21 hPsi_associated_SNPs_2626 0 0 0 0 0 exosome 0.438718594291844 0 0 0 hPsi_site_667 iPseU_CNN:0;iRNA_PseU:0 668 chr20 37356215 37356215 1 + T C BLCA 37356215 + 37356195 37356235 41 AGATCCTCATCGCGTGCCTGTACGAGGAGAATGAAGACGGC AGATCCTCATCGCGTGCCTGCACGAGGAGAATGAAGACGGC Direct Loss 0.94000574783328 0 0.8705493 0 prediction 0.880011495666559 Functional Loss - SLC32A1 ENSG00000101438 CDS Human protein_coding chr20:37356215 chr20:37356215 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2627 0 0 0 0 0 exosome 0.438629453526205 0 0.7410986 0 hPsi_site_668 iPseU_CNN:0.7410986;iRNA_PseU:0 669 chr1 114524263 114524263 1 + T A SKCM 114524263 + 114524243 114524283 41 AACGGGCAGCACTCCCTTATTTTCCCCGCAGATATGGTGCC AACGGGCAGCACTCCCTTATATTCCCCGCAGATATGGTGCC Direct Loss 0.939974991535859 0 0.81927884 0 prediction 0.879949983071717 Functional Loss - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524263 chr1:114524263 nonsynonymous SNV 0.741 5 21 hPsi_associated_SNPs_2628 0 0 1 0 0 exosome 0.438718592995102 0 0.63855768 0 hPsi_site_669 iPseU_CNN:0.63855768;iRNA_PseU:0 670 chr16 57394393 57394393 1 + T C rs41398344 57394393 + 57394373 57394413 41 ACAGCGTCTGCTGCCGTGATTACGTCCGTTACCGTCTGCCC ACAGCGTCTGCTGCCGTGATCACGTCCGTTACCGTCTGCCC Direct Loss 0.939955634571741 0 0.8359659 0 prediction 0.879911269143482 Functional Loss - CCL22 ENSG00000102962 CDS Human protein_coding chr16:57394393 chr16:57394393 nonsynonymous SNV 0.311 1 21 hPsi_associated_SNPs_2629 0 1 0 0 2 Nucleus 0.438714022903825 0 0.6719318 0 hPsi_site_670 iPseU_CNN:0.6719318;iRNA_PseU:0 671 chr21 33040872 33040872 1 + T C UCEC 33040872 + 33040852 33040892 41 AAGTCGTTTGGCTTGTGGTGTAATTGGGATCGCCCAATAAA AAGTCGTTTGGCTTGTGGTGCAATTGGGATCGCCCAATAAA Direct Loss 0.939905280660018 0 0.7461037 0 prediction 0.879810561320037 Functional Loss - SOD1 ENSG00000142168 CDS Human protein_coding chr21:33040872 chr21:33040872 nonsynonymous SNV 0.926 5 21 hPsi_associated_SNPs_2630 0 0 1 0 1 Ribosome 0.438718634521465 0 0.4922074 0 hPsi_site_671 iPseU_CNN:0.4922074;iRNA_PseU:0 672 chr7 6774969 6774969 1 + T C UCEC 6774969 + 6774949 6774989 41 TGAATGACGTCTACCGCGTGTATAATCGACACCAGTATCCA TGAATGACGTCTACCGCGTGCATAATCGACACCAGTATCCA Direct Loss 0.939877090483228 0 0.32565907 0 prediction 0.879754180966456 Functional Loss - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6774969 chr7:6774969 . . 0 21 hPsi_associated_SNPs_2631 0 0 1 0 1 unknown 0.437381844444629 0 0 0 hPsi_site_672 iPseU_CNN:0;iRNA_PseU:0 673 chr19 44661316 44661316 1 + T C STAD 44661316 + 44661296 44661336 41 TGTGTGGTAAGGGTTTCATTTACAGTTCAAGTTTTCAGGCC TGTGTGGTAAGGGTTTCATTCACAGTTCAAGTTTTCAGGCC Direct Loss 0.939840604379621 0 0.76283514 0 prediction 0.879681208759243 Functional Loss - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44661316 chr19:44661316 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_2632 0 0 1 0 0 exosome 0.438719580599841 0 0.52567028 0 hPsi_site_673 iPseU_CNN:0.52567028;iRNA_PseU:0 674 chr7 143632631 143632631 1 + T A rs201010098 143632631 + 143632611 143632651 41 AGCTGTGCAGCCCAGTTATTTTTCTCCCTGGCCTTGGGTGG AGCTGTGCAGCCCAGTTATTATTCTCCCTGGCCTTGGGTGG Direct Loss 0.939826723283659 0 0.33335915 0 prediction 0.879653446567317 Functional Loss - OR2F2 ENSG00000221910 CDS Human protein_coding chr7:143632631 chr7:143632631 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_2633 0 0 0 0 0 unknown 0.438718570249375 0 0 0 hPsi_site_674 iPseU_CNN:0;iRNA_PseU:0 675 chr17 7340213 7340213 1 + T A GBM 7340213 + 7340193 7340233 41 TTCACCACCGTCCTCCTGGCTACCCCTGAGCCCCCTCGCCG TTCACCACCGTCCTCCTGGCAACCCCTGAGCCCCCTCGCCG Direct Loss 0.939786548413984 0 0.70470905 0 prediction 0.879573096827968 Functional Loss - TMEM102 ENSG00000181284 CDS Human protein_coding chr17:7340213 chr17:7340213 synonymous SNV . 0 21 hPsi_associated_SNPs_2634 0 0 1 0 0 exosome 0.438718593146917 0 0.4094181 0 hPsi_site_675 iPseU_CNN:0.4094181;iRNA_PseU:0 676 chr11 118851267 118851267 1 + T G UCEC 118851267 + 118851247 118851287 41 CTGTCCGTCACAATCTCTGTTTTCGAGACAGCTTTGAGAAA CTGTCCGTCACAATCTCTGTGTTCGAGACAGCTTTGAGAAA Direct Loss 0.939773385972268 0 0.874059 0 prediction 0.879546771944537 Functional Loss - FOXR1 ENSG00000176302 CDS Human protein_coding chr11:118851267 chr11:118851267 nonsynonymous SNV 0.994 5 21 hPsi_associated_SNPs_2635 0 0 0 0 1 unknown 0.438440124088803 0 0.748118 0 hPsi_site_676 iPseU_CNN:0.748118;iRNA_PseU:0 677 chr12 48919835 48919835 1 + T C COAD 48919835 + 48919815 48919855 41 AGATCATGGGTAAACAGCTGTATATGCACCTTGTGTGGGGC AGATCATGGGTAAACAGCTGCATATGCACCTTGTGTGGGGC Direct Loss 0.939771466381028 0 0.6225893 0 prediction 0.879542932762057 Functional Loss - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48919835 chr12:48919835 nonsynonymous SNV 0.024 2 21 hPsi_associated_SNPs_2636 0 0 0 0 0 unknown 0.438680805595288 0 0.2451786 0 hPsi_site_677 iPseU_CNN:0.2451786;iRNA_PseU:0 678 chr6 155578056 155578056 1 + A C GBM 155578056 - 155578036 155578076 41 TGGTGCTGTTGGCTTTTCGTTTAATGGGGCAGAAGTGCCCC TGGTGCTGTTGGCTTTTCGTGTAATGGGGCAGAAGTGCCCC Direct Loss 0.939599014332663 0 0.8302934 0 prediction 0.879198028665325 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155578056 chr6:155578056 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2637 0 0 1 0 0 Cytosol 0.438718592351434 0 0.6605868 0 hPsi_site_678 iPseU_CNN:0.6605868;iRNA_PseU:0 679 chr12 53837314 53837314 1 + T C COAD 53837314 + 53837294 53837334 41 GCTCCCCATGGCAATCCAGCTTTCCCCCCAGGTGGGCCCCC GCTCCCCATGGCAATCCAGCCTTCCCCCCAGGTGGGCCCCC Direct Loss 0.93957873867131 0 0.3358448 0 prediction 0.87915747734262 Functional Loss - PRR13 ENSG00000205352 CDS Human protein_coding chr12:53837314 chr12:53837314 synonymous SNV . 0 21 hPsi_associated_SNPs_2638 0 0 0 0 0 Ribosome 0.438030942812367 0 0 0 hPsi_site_679 iPseU_CNN:0;iRNA_PseU:0 680 chr16 31474058 31474058 1 + T G CESC 31474058 + 31474038 31474078 41 TGTGGCTGCCCTTGTGGGGTTTCTGTATGACACTGGGGCCC TGTGGCTGCCCTTGTGGGGTGTCTGTATGACACTGGGGCCC Direct Loss 0.939550910918006 0 0.39357802 0 prediction 0.879101821836011 Functional Loss - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31474058 chr16:31474058 nonsynonymous SNV 0.986 4 21 hPsi_associated_SNPs_2639 0 0 1 0 0 cytosol 0.438733374065284 0 0 0 hPsi_site_680 iPseU_CNN:0;iRNA_PseU:0 681 chr3 151545415 151545415 1 + T C SKCM 151545415 + 151545395 151545435 41 TCAAGATCCAGTCTTTAATTTATCCTGCCCTTCAGCCTCTT TCAAGATCCAGTCTTTAATTCATCCTGCCCTTCAGCCTCTT Direct Loss 0.939509039161962 0 0.39305502 0 prediction 0.879018078323924 Functional Loss - AADAC ENSG00000114771 CDS Human protein_coding chr3:151545415 chr3:151545415 nonsynonymous SNV 0.413 4 21 hPsi_associated_SNPs_2640 0 0 0 0 1 exosome 0.438715250856978 0 0 0 hPsi_site_681 iPseU_CNN:0;iRNA_PseU:0 682 chr17 7578443 7578443 1 + A G HNSC 7578443 - 7578423 7578463 41 GCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACATG GCGTCCGCGCCATGGCCATCCACAAGCAGTCACAGCACATG Direct Loss 0.939469285441649 0 0.5901723 0 prediction 0.878938570883298 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578443 chr17:7578443 nonsynonymous SNV 0.690 5 21 hPsi_associated_SNPs_2641 14 0 1 0 1 Ribosome 0.434664748732727 0 0.1803446 0 hPsi_site_682 iPseU_CNN:0.1803446;iRNA_PseU:0 683 chr1 158576761 158576761 1 + T C LUSC 158576761 + 158576741 158576781 41 CCATGAAATCCAGCACTTTTTTTGTGACACGCCACCTGTGC CCATGAAATCCAGCACTTTTCTTGTGACACGCCACCTGTGC Direct Loss 0.93942026425609 0 0.3229271 0 prediction 0.87884052851218 Functional Loss - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576761 chr1:158576761 nonsynonymous SNV 0.832 4 21 hPsi_associated_SNPs_2642 0 0 0 0 0 unknown 0.438669527778833 0 0 0 hPsi_site_683 iPseU_CNN:0;iRNA_PseU:0 684 chr16 1741860 1741860 1 + T C rs573427871 1741860 + 1741840 1741880 41 GCAGGGGGTAAAGGAAGTGGTATCTTTGACGAATCAACCCC GCAGGGGGTAAAGGAAGTGGCATCTTTGACGAATCAACCCC Direct Loss 0.939396730960836 0 0.6891705 0 prediction 0.878793461921672 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1741860 chr16:1741860 synonymous SNV . 0 21 hPsi_associated_SNPs_2643 0 0 1 0 1 unknown 0.438718592992533 0 0.378341 0 hPsi_site_684 iPseU_CNN:0.378341;iRNA_PseU:0 685 chr14 24567579 24567579 1 + T G UCEC 24567579 + 24567559 24567599 41 GCGAGCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGTA GCGAGCTGTGGATGAGAGGTGTCCAGGCTGCATGCAGGGTA Direct Loss 0.939328377542466 0 0.4107679 0 prediction 0.878656755084932 Functional Loss - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567579 chr14:24567579 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2644 0 0 1 0 0 Endoplasmic reticulum 0.438718701480424 0 0 0 hPsi_site_685 iPseU_CNN:0;iRNA_PseU:0 686 chr4 147561342 147561342 1 + T C UCEC 147561342 + 147561322 147561362 41 CCCGGGCTGGCCCTGGGCGCTATGGCGGGCCCCGACGGCGC CCCGGGCTGGCCCTGGGCGCCATGGCGGGCCCCGACGGCGC Direct Loss 0.939316932789076 0 0.36145306 0 prediction 0.878633865578152 Functional Loss - POU4F2 ENSG00000151615 CDS Human protein_coding chr4:147561342 chr4:147561342 synonymous SNV . 0 21 hPsi_associated_SNPs_2645 0 0 0 0 0 unknown 0.438718389259156 0 0 0 hPsi_site_686 iPseU_CNN:0;iRNA_PseU:0 687 chr5 40691998 40691998 1 + T C STAD 40691998 + 40691978 40692018 41 CCATCCTAGACCCCTGGATATATATCCTCCTGAGAAAGACA CCATCCTAGACCCCTGGATACATATCCTCCTGAGAAAGACA Direct Loss 0.939299199422996 0 0.6772058 0 prediction 0.878598398845992 Functional Loss - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40691998 chr5:40691998 nonsynonymous SNV 0.996 5 21 hPsi_associated_SNPs_2646 0 0 0 0 0 Cytosol 0.438718593105861 0 0.3544116 0 hPsi_site_687 iPseU_CNN:0.3544116;iRNA_PseU:0 688 chr11 51515399 51515399 1 + T A COAD 51515399 + 51515379 51515419 41 ATATCATCACTGTGGTGGGATATGTGCTCATTGTGGTCACC ATATCATCACTGTGGTGGGAAATGTGCTCATTGTGGTCACC Direct Loss 0.939295967036712 0 0.5006425 0 prediction 0.878591934073425 Functional Loss - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515399 chr11:51515399 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2647 0 0 0 0 0 unknown 0.443075654001668 0 0.00128499999999998 0 hPsi_site_688 iPseU_CNN:0.00128499999999998;iRNA_PseU:0 689 chr12 52467520 52467520 1 + T G GBM 52467520 + 52467500 52467540 41 GGCTGTGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCA GGCTGTGCTGCACACGGTGCGTCTGCACCGCAGCACAGGCA Direct Loss 0.939193558320814 0 0.31221163 0 prediction 0.878387116641629 Functional Loss - ATG101 ENSG00000123395 CDS Human protein_coding chr12:52467520 chr12:52467520 nonsynonymous SNV 0.924 4 21 hPsi_associated_SNPs_2648 0 0 0 0 0 Ribosome 0.432992275117117 0 0 0 hPsi_site_689 iPseU_CNN:0;iRNA_PseU:0 690 chr11 5373563 5373563 1 + T C UCEC 5373563 + 5373543 5373583 41 TCGTTCACATCACAATGAGCTACATCCACTTCCTTTTCCCA TCGTTCACATCACAATGAGCCACATCCACTTCCTTTTCCCA Direct Loss 0.939162697776461 0 0.6400255 0 prediction 0.878325395552921 Functional Loss - OR51B6 ENSG00000176239 CDS Human protein_coding chr11:5373563 chr11:5373563 nonsynonymous SNV 0.565 2 21 hPsi_associated_SNPs_2649 0 0 0 0 0 unknown 0.438163958135028 0 0.280051 0 hPsi_site_690 iPseU_CNN:0.280051;iRNA_PseU:0 691 chr14 20711810 20711810 1 + T A LUSC 20711810 + 20711790 20711830 41 GCAGAAGATCCTCACACTGGTATATTCAGTAACGACTCCTC GCAGAAGATCCTCACACTGGAATATTCAGTAACGACTCCTC Direct Loss 0.939156989128378 0 0.59333086 0 prediction 0.878313978256757 Functional Loss - OR11H4 ENSG00000176198 CDS Human protein_coding chr14:20711810 chr14:20711810 nonsynonymous SNV 0.785 1 21 hPsi_associated_SNPs_2650 0 0 0 0 0 unknown 0.438718583132128 0 0.18666172 0 hPsi_site_691 iPseU_CNN:0.18666172;iRNA_PseU:0 692 chr1 32829406 32829406 1 + T C BRCA 32829406 + 32829386 32829426 41 GGCCCTCTTCCGTCAGATGGTTGAGGCCATCCGCTACTGCC GGCCCTCTTCCGTCAGATGGCTGAGGCCATCCGCTACTGCC Direct Loss 0.939092732454363 0 0.29586518 0 prediction 0.878185464908727 Functional Loss - TSSK3 ENSG00000162526 CDS Human protein_coding chr1:32829406 chr1:32829406 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2651 0 0 0 0 0 chromatin 0.438936524324115 0 0 0 hPsi_site_692 iPseU_CNN:0;iRNA_PseU:0 693 chr21 46020564 46020564 1 + T A ESCA 46020564 + 46020544 46020584 41 TCTGCTCCAGCGACCTGAGCTACGGCAGCCGCGTCTGCCTT TCTGCTCCAGCGACCTGAGCAACGGCAGCCGCGTCTGCCTT Direct Loss 0.939090766190645 0 0.66854286 0 prediction 0.878181532381289 Functional Loss - KRTAP10-7 ENSG00000205441 CDS Human other chr21:46020564 chr21:46020564 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_2652 0 0 0 0 0 unknown 0.438711102144848 0 0.33708572 0 hPsi_site_693 iPseU_CNN:0.33708572;iRNA_PseU:0 694 chrX 75397516 75397516 1 + T C COAD 75397516 + 75397496 75397536 41 AAGGCTATAACAAAGCTGTTTATATCAGTGTTCAGGACAAA AAGGCTATAACAAAGCTGTTCATATCAGTGTTCAGGACAAA Direct Loss 0.939090194158907 0 0.57881063 0 prediction 0.878180388317814 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397516 chrX:75397516 nonsynonymous SNV 0.980 0 21 hPsi_associated_SNPs_2653 0 0 0 0 1 nucleoplasm 0.438719678051301 0 0.15762126 0 hPsi_site_694 iPseU_CNN:0.15762126;iRNA_PseU:0 695 chr16 55518022 55518022 1 + T G DLBC 55518022 + 55518002 55518042 41 GCGATGTGACCCCACTGCGGTTTTCTCGAATCCATGATGGA GCGATGTGACCCCACTGCGGGTTTCTCGAATCCATGATGGA Direct Loss 0.939081082570697 0 0.56186426 0 prediction 0.878162165141394 Functional Loss - MMP2 ENSG00000087245 CDS Human protein_coding chr16:55518022 chr16:55518022 nonsynonymous SNV 0.984 2 21 hPsi_associated_SNPs_2654 0 0 0 0 2 Endoplasmic reticulum 0.438761875907062 0 0.12372852 0 hPsi_site_695 iPseU_CNN:0.12372852;iRNA_PseU:0 696 chr19 8953801 8953801 1 + T C rs2969292 8953801 + 8953781 8953821 41 CTCTGCAAACAATTTCTGGTTACTGAGGAAGATATCAGGAA CTCTGCAAACAATTTCTGGTCACTGAGGAAGATATCAGGAA Direct Loss 0.939037095616766 0 0.32802165 0 prediction 0.878074191233531 Functional Loss - MBD3L1 ENSG00000170948 CDS Human protein_coding chr19:8953801 chr19:8953801 synonymous SNV . 0 21 hPsi_associated_SNPs_2655 0 0 0 0 0 nucleus 0.438714111417064 0 0 0 hPsi_site_696 iPseU_CNN:0;iRNA_PseU:0 697 chr7 6063211 6063211 1 + A G COAD 6063211 - 6063191 6063231 41 CAGCCTCCGATCTGCTGGAGTACAGACCACAGCACCACGTC CAGCCTCCGATCTGCTGGAGCACAGACCACAGCACCACGTC Direct Loss 0.938951784887741 0 0.7965121 0 prediction 0.877903569775482 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063211 chr7:6063211 synonymous SNV . 0 21 hPsi_associated_SNPs_2656 0 0 1 0 0 Ribosome 0.437784391493962 0 0.5930242 0 hPsi_site_697 iPseU_CNN:0.5930242;iRNA_PseU:0 698 chr19 49536230 49536230 1 + T A rs535359388 49536230 + 49536210 49536250 41 GCAACTACCGCGATGTGCGCTTCGAGTCCATCCGGCTCCCT GCAACTACCGCGATGTGCGCATCGAGTCCATCCGGCTCCCT Direct Loss 0.938915288586643 0 0.9672557 0 prediction 0.877830577173285 Functional Loss - CGB2 ENSG00000104818 CDS Human protein_coding chr19:49536230 chr19:49536230 nonsynonymous SNV 0.041 4 21 hPsi_associated_SNPs_2657 0 0 0 0 1 unknown 0.438718838649565 0 0.9345114 0 hPsi_site_698 iPseU_CNN:0.9345114;iRNA_PseU:0 699 chr21 31768561 31768561 1 + T A UCEC 31768561 + 31768541 31768581 41 GCCAGCTGGGTTCCTCTCTCTATAGGGGCTGTCAGCAGACC GCCAGCTGGGTTCCTCTCTCAATAGGGGCTGTCAGCAGACC Direct Loss 0.938907260777127 0 0.4777006 0 prediction 0.877814521554253 Functional Loss - KRTAP13-1 ENSG00000198390 CDS Human protein_coding chr21:31768561 chr21:31768561 nonsynonymous SNV 0.147 0 21 hPsi_associated_SNPs_2658 0 0 0 0 0 unknown 0.438720832052488 0 0 0 hPsi_site_699 iPseU_CNN:0;iRNA_PseU:0 700 chr6 134305716 134305716 1 + T A COAD 134305716 + 134305696 134305736 41 TGTGGCTTATTTTGTGTAGTTACGAACCTGAACTTCATCCT TGTGGCTTATTTTGTGTAGTAACGAACCTGAACTTCATCCT Direct Loss 0.93888990231286 0 0.8291568 0 prediction 0.877779804625721 Functional Loss - TBPL1 ENSG00000028839 CDS Human protein_coding chr6:134305716 chr6:134305716 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_2659 0 0 1 0 2 Ribosome 0.427389571754557 0 0.6583136 0 hPsi_site_700 iPseU_CNN:0.6583136;iRNA_PseU:0 701 chr11 64884013 64884013 1 + T C STAD 64884013 + 64883993 64884033 41 AGGGCGGCCACCTCCTCGGCTACCACAGCATGGGCTTGGTG AGGGCGGCCACCTCCTCGGCCACCACAGCATGGGCTTGGTG Direct Loss 0.938872406236204 0 0.7752812 0 prediction 0.877744812472408 Functional Loss - ZNHIT2 ENSG00000174276 CDS Human protein_coding chr11:64884013 chr11:64884013 synonymous SNV . 0 21 hPsi_associated_SNPs_2660 0 0 0 0 0 Ribosome 0.438723138403167 0 0.5505624 0 hPsi_site_701 iPseU_CNN:0.5505624;iRNA_PseU:0 702 chr5 176823997 176823997 1 + T C STAD 176823997 + 176823977 176824017 41 GCCTACCCGCTCACACTGGGTTCCAACATCGGCACCACCAC GCCTACCCGCTCACACTGGGCTCCAACATCGGCACCACCAC Direct Loss 0.938839810201014 0 0.54665875 0 prediction 0.877679620402029 Functional Loss - SLC34A1 ENSG00000131183 CDS Human protein_coding chr5:176823997 chr5:176823997 synonymous SNV . 0 21 hPsi_associated_SNPs_2661 0 0 0 0 2 exosome 0.437428806222627 0 0.0933174999999999 0 hPsi_site_702 iPseU_CNN:0.0933174999999999;iRNA_PseU:0 703 chr2 54028906 54028906 1 + T C UCEC 54028906 + 54028886 54028926 41 ATCACTGCCAGGATCTCCATTTAAGCCCCTCACCCTGAGGC ATCACTGCCAGGATCTCCATCTAAGCCCCTCACCCTGAGGC Direct Loss 0.938835280432865 0 0.7141526 0 prediction 0.87767056086573 Functional Loss - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54028906 chr2:54028906 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_2662 0 0 1 0 2 Endoplasmic reticulum 0.438718592995107 0 0.4283052 0 hPsi_site_703 iPseU_CNN:0.4283052;iRNA_PseU:0 704 chrX 75397746 75397746 1 + T C UCEC 75397746 + 75397726 75397766 41 GGTGAAAAAGCTATGTAAGGTATACAGGGAACAGCACTCTA GGTGAAAAAGCTATGTAAGGCATACAGGGAACAGCACTCTA Direct Loss 0.938818243922293 0 0.6161753 0 prediction 0.877636487844585 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397746 chrX:75397746 nonsynonymous SNV 0.544 1 21 hPsi_associated_SNPs_2663 0 0 1 1 0 nucleoplasm 0.43871895563157 0 0.2323506 0 hPsi_site_704 iPseU_CNN:0.2323506;iRNA_PseU:0 705 chr15 76633568 76633568 1 + T A UCEC 76633568 + 76633548 76633588 41 GCGCAGTGGAGGTGCAGACGTACCAGCCGCCGTGGAAGGCG GCGCAGTGGAGGTGCAGACGAACCAGCCGCCGTGGAAGGCG Direct Loss 0.938817066628031 0 0.80032897 0 prediction 0.877634133256062 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76633568 chr15:76633568 nonsynonymous SNV 0.985 2 21 hPsi_associated_SNPs_2664 0 0 1 0 2 Cytosol 0.438608645108359 0 0.60065794 0 hPsi_site_705 iPseU_CNN:0.60065794;iRNA_PseU:0 706 chr11 48239117 48239117 1 + T C COAD 48239117 + 48239097 48239137 41 ATCTTGTTTTTTGGACCTGCTATCTTCCTCTACATGCGACC ATCTTGTTTTTTGGACCTGCCATCTTCCTCTACATGCGACC Direct Loss 0.938811772621977 0 0.3587254 0 prediction 0.877623545243954 Functional Loss - OR4B1 ENSG00000175619 CDS Human protein_coding chr11:48239117 chr11:48239117 synonymous SNV . 0 21 hPsi_associated_SNPs_2665 0 0 0 0 0 unknown 0.438599737514643 0 0 0 hPsi_site_706 iPseU_CNN:0;iRNA_PseU:0 707 chr10 115805628 115805628 1 + T C rs190324624 115805628 + 115805608 115805648 41 GTGTGCGTGTGATGCATCTTTAGATTTTTTTCCCCCACCAG GTGTGCGTGTGATGCATCTTCAGATTTTTTTCCCCCACCAG Direct Loss 0.938766846845632 0 0.42287934 0 prediction 0.877533693691264 Functional Loss - ADRB1 ENSG00000043591 UTR3 Human protein_coding chr10:115805628 chr10:115805628 . . 0 21 hPsi_associated_SNPs_2666 0 0 0 5 0 Nucleus 0.438718341606614 0 0 0 hPsi_site_707 iPseU_CNN:0;iRNA_PseU:0 708 chr20 25255290 25255290 1 + T C UCEC 25255290 + 25255270 25255310 41 GAGAAAGCGCGGCCTGAGTATATGCTTCCCGTGCACTTCTA GAGAAAGCGCGGCCTGAGTACATGCTTCCCGTGCACTTCTA Direct Loss 0.938663258627369 0 0.67771006 0 prediction 0.877326517254737 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25255290 chr20:25255290 synonymous SNV . 0 21 hPsi_associated_SNPs_2667 0 0 1 0 2 Nucleus 0.438718592978091 0 0.35542012 0 hPsi_site_708 iPseU_CNN:0.35542012;iRNA_PseU:0 709 chr7 128034949 128034949 1 + T G UCEC 128034949 + 128034929 128034969 41 CAGGGTCAGGGAACCTGAAGTATCGTTTCTGGCTGCTGCTG CAGGGTCAGGGAACCTGAAGGATCGTTTCTGGCTGCTGCTG Direct Loss 0.938640841454768 0 0.68422174 0 prediction 0.877281682909537 Functional Loss - IMPDH1 ENSG00000106348 CDS Human protein_coding chr7:128034949 chr7:128034949 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2668 0 0 0 0 0 Cytosol 0.438715551203243 0 0.36844348 0 hPsi_site_709 iPseU_CNN:0.36844348;iRNA_PseU:0 710 chr12 54396394 54396394 1 + T A DLBC 54396394 + 54396374 54396414 41 GCGGCAGGTCAAAATCTGGTTTCAGAATCGAAGGATGAAGA GCGGCAGGTCAAAATCTGGTATCAGAATCGAAGGATGAAGA Direct Loss 0.938613708671175 0 0.7399166 0 prediction 0.87722741734235 Functional Loss - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54396394 chr12:54396394 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2669 0 0 1 0 0 chromatin 0.438719032106855 0 0.4798332 0 hPsi_site_710 iPseU_CNN:0.4798332;iRNA_PseU:0 711 chr17 46628451 46628451 1 + T A LUAD 46628451 + 46628431 46628471 41 CGCCGCCGACCCCGGGGGGCTCTTGTCCCCTCCCCCGCCGC CGCCGCCGACCCCGGGGGGCACTTGTCCCCTCCCCCGCCGC Direct Loss 0.938568220146922 0 0.36301166 0 prediction 0.877136440293844 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628451 chr17:46628451 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2670 0 0 1 0 1 Nucleus 0.438718687454887 0 0 0 hPsi_site_711 iPseU_CNN:0;iRNA_PseU:0 712 chr14 103371735 103371735 1 + T G LUAD 103371735 + 103371715 103371755 41 TGGGGAAGACCCTGTCCCTTTACAGCCAGCCTTTCTACACT TGGGGAAGACCCTGTCCCTTGACAGCCAGCCTTTCTACACT Direct Loss 0.9385139614081 0 0.74359286 0 prediction 0.877027922816199 Functional Loss - TRAF3 ENSG00000131323 CDS Human protein_coding chr14:103371735 chr14:103371735 nonsynonymous SNV 0.977 4 21 hPsi_associated_SNPs_2671 0 0 1 0 0 Cytosol 0.438718592995238 0 0.48718572 0 hPsi_site_712 iPseU_CNN:0.48718572;iRNA_PseU:0 713 chr12 64202695 64202695 1 + T C UCEC 64202695 + 64202675 64202715 41 ATGGGTGCTCCCTTTATCTTTATCAAGAACTGGAAGGAACT ATGGGTGCTCCCTTTATCTTCATCAAGAACTGGAAGGAACT Direct Loss 0.938470991375085 0 0.27426407 0 prediction 0.876941982750169 Functional Loss - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64202695 chr12:64202695 synonymous SNV . 0 21 hPsi_associated_SNPs_2672 0 0 1 0 0 Endoplasmic reticulum 0.438709512884739 0 0 0 hPsi_site_713 iPseU_CNN:0;iRNA_PseU:0 714 chr3 98251121 98251121 1 + T G UCEC 98251121 + 98251101 98251141 41 TGGCTGCCTCTGACTTCATTTTTCTTGTCACATTGCCTCTC TGGCTGCCTCTGACTTCATTGTTCTTGTCACATTGCCTCTC Direct Loss 0.938417159414397 0 0.64112365 0 prediction 0.876834318828794 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251121 chr3:98251121 nonsynonymous SNV 0.509 3 21 hPsi_associated_SNPs_2673 0 0 0 0 0 exosome 0.438674610455453 0 0.2822473 0 hPsi_site_714 iPseU_CNN:0.2822473;iRNA_PseU:0 715 chr2 122288554 122288554 1 + T C rs145446412 122288554 + 122288534 122288574 41 ACCCGCATCAACTAGAGCTTTTGCTTTATTTTGGTGCAATT ACCCGCATCAACTAGAGCTTCTGCTTTATTTTGGTGCAATT Direct Loss 0.938368963754101 0 0.31786507 0 prediction 0.876737927508203 Functional Loss - RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288554 chr2:122288554 . . 0 21 hPsi_associated_SNPs_2674 0 0 1 9 0 unknown 0.43828966704793 0 0 0 hPsi_site_715 iPseU_CNN:0;iRNA_PseU:0 716 chr1 2116414 2116414 1 + A G COAD 2116414 - 2116394 2116434 41 CGGTGGACAGCAATAATGGGTTGATATACTCAAAGCCTTCG CGGTGGACAGCAATAATGGGCTGATATACTCAAAGCCTTCG Direct Loss 0.938319336022854 0 0.3317339 0 prediction 0.876638672045708 Functional Loss - PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2116414 chr1:2116414 nonsynonymous SNV 0.971 3 21 hPsi_associated_SNPs_2675 0 0 0 4 0 Ribosome 0.438691873113048 0 0 0 hPsi_site_716 iPseU_CNN:0;iRNA_PseU:0 717 chr1 247751962 247751962 1 + T A LUSC 247751962 + 247751942 247751982 41 CTATCGCCTATGGTGGCTGTTTGGTTCACCTTTACAACTCC CTATCGCCTATGGTGGCTGTATGGTTCACCTTTACAACTCC Direct Loss 0.938297408127458 0 0.4734965 0 prediction 0.876594816254916 Functional Loss - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247751962 chr1:247751962 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_2676 0 0 0 0 0 unknown 0.439042599762458 0 0 0 hPsi_site_717 iPseU_CNN:0;iRNA_PseU:0 718 chr14 101528419 101528419 1 + T G COAD 101528419 + 101528399 101528439 41 TGCCCTTGGTGAATTCGCTTTATTTATGTTGAATCACACAA TGCCCTTGGTGAATTCGCTTGATTTATGTTGAATCACACAA Direct Loss 0.938229986461034 0 0.5417285 0 prediction 0.876459972922068 Functional Loss - MIR377 ENSG00000199015 ncRNA_exonic Human miRNA chr14:101528419 chr14:101528419 . . 0 21 hPsi_associated_SNPs_2677 0 0 0 0 0 unknown 0.437644867111298 0 0.0834569999999999 0 hPsi_site_718 iPseU_CNN:0.0834569999999999;iRNA_PseU:0 719 chr15 60297214 60297214 1 + T C STAD 60297214 + 60297194 60297234 41 ACCAGAAGCCGCCCTACTCGTACATCTCGCTGACCGCTATG ACCAGAAGCCGCCCTACTCGCACATCTCGCTGACCGCTATG Direct Loss 0.938100445946006 0 0.9180187 0 prediction 0.876200891892012 Functional Loss - FOXB1 ENSG00000171956 CDS Human protein_coding chr15:60297214 chr15:60297214 nonsynonymous SNV 0.980 4 21 hPsi_associated_SNPs_2678 0 0 0 0 0 exosome 0.438719939645809 0 0.8360374 0 hPsi_site_719 iPseU_CNN:0.8360374;iRNA_PseU:0 720 chr6 111288941 111288941 1 + T C rs41289884 111288941 + 111288921 111288961 41 TTCTGGTCCTCTTATTGATATACCTTCTGAGACAGAAGGTT TTCTGGTCCTCTTATTGATACACCTTCTGAGACAGAAGGTT Direct Loss 0.938084341336504 0 0.47674793 0 prediction 0.876168682673008 Functional Loss - GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288941 chr6:111288941 nonsynonymous SNV 0.080 0 21 hPsi_associated_SNPs_2679 0 0 1 0 0 Ribosome 0.438718593202602 0 0 0 hPsi_site_720 iPseU_CNN:0;iRNA_PseU:0 721 chr20 62370125 62370125 1 + T G SKCM 62370125 + 62370105 62370145 41 GCGGCCCCCTGGAAAACGTGTATGAGAGCATCCGGGAGCTG GCGGCCCCCTGGAAAACGTGGATGAGAGCATCCGGGAGCTG Direct Loss 0.938083308549978 0 0.66337544 0 prediction 0.876166617099956 Functional Loss - LIME1 ENSG00000203896 CDS Human protein_coding chr20:62370125 chr20:62370125 nonsynonymous SNV 0.993 3 21 hPsi_associated_SNPs_2680 0 0 1 0 0 exosome 0.438718608237311 0 0.32675088 0 hPsi_site_721 iPseU_CNN:0.32675088;iRNA_PseU:0 722 chrX 82763423 82763423 1 + T C KIRC 82763423 + 82763403 82763443 41 GCATGCAGCAGGGGAGTCCTTTCCGCAACCCTCAGAAACTT GCATGCAGCAGGGGAGTCCTCTCCGCAACCCTCAGAAACTT Direct Loss 0.938081170637477 0 0.6084964 0 prediction 0.876162341274954 Functional Loss - POU3F4 ENSG00000196767 CDS Human protein_coding chrX:82763423 chrX:82763423 nonsynonymous SNV 0.976 3 21 hPsi_associated_SNPs_2681 0 0 0 0 0 unknown 0.438715755037926 0 0.2169928 0 hPsi_site_722 iPseU_CNN:0.2169928;iRNA_PseU:0 723 chr6 26575805 26575805 1 + T A rs535861485 26575805 + 26575785 26575825 41 AGGGCTAGGGGTCCTTTCGATAGCTCAGTTGGTAGAGCGGA AGGGCTAGGGGTCCTTTCGAAAGCTCAGTTGGTAGAGCGGA Direct Loss 0.93802934125198 0 0.59625113 0 prediction 0.876058682503961 Functional Loss - LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575805 chr6:26575805 . . 0 21 hPsi_associated_SNPs_2682 0 0 1 0 0 unknown 0.438717899096978 0 0.19250226 0 hPsi_site_723 iPseU_CNN:0.19250226;iRNA_PseU:0 724 chr20 33147658 33147658 1 + T C KICH 33147658 + 33147638 33147678 41 AGGAGAAAGACGAGGACGGCTTCCTCTATATGGTCTACGCC AGGAGAAAGACGAGGACGGCCTCCTCTATATGGTCTACGCC Direct Loss 0.937997110373379 0 0.62460977 0 prediction 0.875994220746757 Functional Loss - MAP1LC3A ENSG00000101460 CDS Human protein_coding chr20:33147658 chr20:33147658 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2683 0 0 0 0 0 Ribosome 0.438718595024388 0 0.24921954 0 hPsi_site_724 iPseU_CNN:0.24921954;iRNA_PseU:0 725 chr3 5249844 5249844 1 + T C UCEC 5249844 + 5249824 5249864 41 ACTATGCCATATGGAAACGATATGGTGCCCTCCCTGAGAGA ACTATGCCATATGGAAACGACATGGTGCCCTCCCTGAGAGA Direct Loss 0.937993079855281 0 0.43803775 0 prediction 0.875986159710562 Functional Loss - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5249844 chr3:5249844 nonsynonymous SNV 0.989 2 21 hPsi_associated_SNPs_2684 0 0 1 0 1 Ribosome 0.438719796840832 0 0 0 hPsi_site_725 iPseU_CNN:0;iRNA_PseU:0 726 chr2 242743009 242743009 1 + T A UCEC 242743009 + 242742989 242743029 41 ACGCGCAGTGCGAGGAGGGCTACGTGCGCGCGCGCATCGCC ACGCGCAGTGCGAGGAGGGCAACGTGCGCGCGCGCATCGCC Direct Loss 0.937981348209472 0 0.99241066 0 prediction 0.875962696418944 Functional Loss - GAL3ST2 ENSG00000154252 CDS Human protein_coding chr2:242743009 chr2:242743009 nonsynonymous SNV 0.208 2 21 hPsi_associated_SNPs_2685 0 0 0 0 0 nucleolus 0.439411393385779 0 0.98482132 0 hPsi_site_726 iPseU_CNN:0.98482132;iRNA_PseU:0 727 chr11 64884014 64884014 1 + A G UCEC 64884014 - 64883994 64884034 41 TCACCAAGCCCATGCTGTGGTAGCCGAGGAGGTGGCCGCCC TCACCAAGCCCATGCTGTGGCAGCCGAGGAGGTGGCCGCCC Direct Loss 0.937945065369126 0 0.3261783 0 prediction 0.875890130738253 Functional Loss - ZNHIT2 ENSG00000174276 CDS Human protein_coding chr11:64884014 chr11:64884014 nonsynonymous SNV 0.450 0 21 hPsi_associated_SNPs_2686 0 0 0 0 0 Ribosome 0.438699340059711 0 0 0 hPsi_site_727 iPseU_CNN:0;iRNA_PseU:0 728 chr15 23811463 23811463 1 + T G HNSC 23811463 + 23811443 23811483 41 GGCTCGGCTGCTGAAAGGGGTTTCTTTGAAGCCGAGAGAGA GGCTCGGCTGCTGAAAGGGGGTTCTTTGAAGCCGAGAGAGA Direct Loss 0.937938270050341 0 0.30547625 0 prediction 0.875876540100681 Functional Loss - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811463 chr15:23811463 synonymous SNV . 0 21 hPsi_associated_SNPs_2687 0 0 1 0 0 chromatin 0.438718592273764 0 0 0 hPsi_site_728 iPseU_CNN:0;iRNA_PseU:0 729 chr19 57868695 57868695 1 + T C GBM 57868695 + 57868675 57868715 41 TGTGGGAAGGCCTTCAGCCGTAAAGACACACTTGTGCAACA TGTGGGAAGGCCTTCAGCCGCAAAGACACACTTGTGCAACA Direct Loss 0.937922898406414 0 0.74753135 0 prediction 0.875845796812829 Functional Loss - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57868695 chr19:57868695 synonymous SNV . 0 21 hPsi_associated_SNPs_2688 0 0 0 0 0 chromatin 0.438718671943278 0 0.4950627 0 hPsi_site_729 iPseU_CNN:0.4950627;iRNA_PseU:0 730 chr2 150061851 150061851 1 + T C HNSC 150061851 + 150061831 150061871 41 ATAGCTGTTGTCCAGATCGTTATCTTCTCAGAAAGCTGGGC ATAGCTGTTGTCCAGATCGTCATCTTCTCAGAAAGCTGGGC Direct Loss 0.9379110090752 0 0.55180955 0 prediction 0.875822018150399 Functional Loss - LYPD6B ENSG00000150556 CDS Human protein_coding chr2:150061851 chr2:150061851 synonymous SNV . 0 21 hPsi_associated_SNPs_2689 0 0 0 0 2 exosome 0.438151996688245 0 0.1036191 0 hPsi_site_730 iPseU_CNN:0.1036191;iRNA_PseU:0 731 chr5 175913402 175913402 1 + T C UCEC 175913402 + 175913382 175913422 41 GCAAGAGGGCGTACCTAGTGTTTTCAACCCACCTCCATCAC GCAAGAGGGCGTACCTAGTGCTTTCAACCCACCTCCATCAC Direct Loss 0.937881379164549 0 0.86763155 0 prediction 0.875762758329098 Functional Loss - FAF2 ENSG00000113194 CDS Human protein_coding chr5:175913402 chr5:175913402 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2690 0 0 1 0 1 Endoplasmic reticulum 0.438597232795922 0 0.7352631 0 hPsi_site_731 iPseU_CNN:0.7352631;iRNA_PseU:0 732 chr15 63866272 63866272 1 + T C THCA 63866272 + 63866252 63866292 41 GCATCTACTGTTGTCACGGCTATATTCGGAGGCATTCTCCA GCATCTACTGTTGTCACGGCCATATTCGGAGGCATTCTCCA Direct Loss 0.937859883694422 0 0.7249696 0 prediction 0.875719767388843 Functional Loss - USP3 ENSG00000140455 CDS Human protein_coding chr15:63866272 chr15:63866272 synonymous SNV . 0 21 hPsi_associated_SNPs_2691 0 0 1 0 2 Cytosol 0.438706989972099 0 0.4499392 0 hPsi_site_732 iPseU_CNN:0.4499392;iRNA_PseU:0 733 chr20 43945561 43945561 1 + T G UCEC 43945561 + 43945541 43945581 41 TGGAGAGCATCCATCAGGAGTTCACGCGCACCAACTTCCAC TGGAGAGCATCCATCAGGAGGTCACGCGCACCAACTTCCAC Direct Loss 0.937844115010647 0 0.30831587 0 prediction 0.875688230021294 Functional Loss - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43945561 chr20:43945561 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_2692 0 0 0 0 0 unknown 0.437199850342807 0 0 0 hPsi_site_733 iPseU_CNN:0;iRNA_PseU:0 Multiple continuous traits in DGI samples 734 chr16 204368 204368 1 + T C LIHC 204368 + 204348 204388 41 GGACAAGTTCCTATCGGTCGTATCCTCTGTCCTGACCGAGA GGACAAGTTCCTATCGGTCGCATCCTCTGTCCTGACCGAGA Direct Loss 0.937789656423992 0 0.43176967 0 prediction 0.875579312847985 Functional Loss - HBZ ENSG00000130656 CDS Human protein_coding chr16:204368 chr16:204368 nonsynonymous SNV 0.270 2 21 hPsi_associated_SNPs_2693 0 0 1 0 1 nucleus 0.438718557700009 0 0 0 hPsi_site_734 iPseU_CNN:0;iRNA_PseU:0 735 chrX 89177201 89177201 1 + T A LGG 89177201 + 89177181 89177221 41 ATGTCGAGAAATAACGCAGATACAGGCAGAGTTCTTGCCTT ATGTCGAGAAATAACGCAGAAACAGGCAGAGTTCTTGCCTT Direct Loss 0.937752314067295 0 0.5131589 0 prediction 0.875504628134589 Functional Loss - TGIF2LX ENSG00000153779 CDS Human protein_coding chrX:89177201 chrX:89177201 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_2694 0 0 0 0 0 exosome 0.438617254247662 0 0.0263177999999999 0 hPsi_site_735 iPseU_CNN:0.0263177999999999;iRNA_PseU:0 736 chr9 107266847 107266847 1 + T C COAD 107266847 + 107266827 107266867 41 CAGGGTGCGCCACTCAGATGTACCTCTCCCTTGCCATGGGC CAGGGTGCGCCACTCAGATGCACCTCTCCCTTGCCATGGGC Direct Loss 0.937707154747633 0 0.41799715 0 prediction 0.875414309495267 Functional Loss - OR13F1 ENSG00000186881 CDS Human protein_coding chr9:107266847 chr9:107266847 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2695 0 0 0 0 0 unknown 0.445696311008926 0 0 0 hPsi_site_736 iPseU_CNN:0;iRNA_PseU:0 737 chr9 127996037 127996037 1 + T C COAD 127996037 + 127996017 127996057 41 CGATTGGACCATTCCATGTGTATCATTCCATGGCCAGTGAC CGATTGGACCATTCCATGTGCATCATTCCATGGCCAGTGAC Direct Loss 0.937701175024188 0 0.36697024 0 prediction 0.875402350048376 Functional Loss - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996037 chr9:127996037 synonymous SNV . 0 21 hPsi_associated_SNPs_2696 0 0 1 2 1 Cytosol 0.438718589255092 0 0 0 hPsi_site_737 iPseU_CNN:0;iRNA_PseU:0 738 chr14 101526096 101526096 1 + T C BRCA 101526096 + 101526076 101526116 41 GGGTCTGCGCTAGCGTGTGGTACTTGAAGATAGGTTATCCG GGGTCTGCGCTAGCGTGTGGCACTTGAAGATAGGTTATCCG Direct Loss 0.937670113412177 0 0.7444514 0 prediction 0.875340226824355 Functional Loss - MIR154 ENSG00000207978 ncRNA_exonic Human miRNA chr14:101526096 chr14:101526096 . . 0 21 hPsi_associated_SNPs_2697 0 0 0 0 0 unknown 0.438716994241056 0 0.4889028 0 hPsi_site_738 iPseU_CNN:0.4889028;iRNA_PseU:0 739 chr17 42254204 42254204 1 + A G rs200625323 42254204 - 42254184 42254224 41 GGTACAGAGCCACATGTTGCTCCAGGCCGCGCGCCGCCGCC GGTACAGAGCCACATGTTGCCCCAGGCCGCGCGCCGCCGCC Direct Loss 0.937631662544566 0 0.39636177 0 prediction 0.875263325089132 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42254204 chr17:42254204 nonsynonymous SNV 0.322 1 21 hPsi_associated_SNPs_2698 0 0 1 0 0 Nucleus 0.438718550220635 0 0 0 hPsi_site_739 iPseU_CNN:0;iRNA_PseU:0 740 chr6 26020953 26020953 1 + T G BLCA 26020953 + 26020933 26020973 41 GCGCGAGATTGCGCAGGACTTTAAAACAGACCTGCGTTTCC GCGCGAGATTGCGCAGGACTGTAAAACAGACCTGCGTTTCC Direct Loss 0.937559385226053 0 0.64756685 0 prediction 0.875118770452107 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020953 chr6:26020953 nonsynonymous SNV 0.976 2 21 hPsi_associated_SNPs_2699 0 0 1 0 0 exosome 0.438720136643443 0 0.2951337 0 hPsi_site_740 iPseU_CNN:0.2951337;iRNA_PseU:0 741 chr1 109260466 109260466 1 + T C rs537197955 109260466 + 109260446 109260486 41 AGTATCACTGTAGAATGGGCTACAGTGCCGGGTGCCACCAG AGTATCACTGTAGAATGGGCCACAGTGCCGGGTGCCACCAG Direct Loss 0.937494457146193 0 0.6204767 0 prediction 0.874988914292386 Functional Loss - FNDC7 ENSG00000143107 CDS Human protein_coding chr1:109260466 chr1:109260466 synonymous SNV . 0 21 hPsi_associated_SNPs_2700 0 0 0 0 1 exosome 0.438718482183373 0 0.2409534 0 hPsi_site_741 iPseU_CNN:0.2409534;iRNA_PseU:0 742 chr9 91159310 91159310 1 + T A UCEC 91159310 + 91159290 91159330 41 GCAGTGAGCTGAGGAAGAGGTACAACGTCACAGCCATCCCC GCAGTGAGCTGAGGAAGAGGAACAACGTCACAGCCATCCCC Direct Loss 0.937477702217087 0 0.69815546 0 prediction 0.874955404434174 Functional Loss - NXNL2 ENSG00000130045 CDS Human protein_coding chr9:91159310 chr9:91159310 nonsynonymous SNV 0.162 1 21 hPsi_associated_SNPs_2701 0 0 0 0 1 Nucleus 0.438718593004556 0 0.39631092 0 hPsi_site_742 iPseU_CNN:0.39631092;iRNA_PseU:0 743 chr6 26020909 26020909 1 + T G CESC 26020909 + 26020889 26020929 41 TCCACTGAACTGCTTATTCGTAAACTACCTTTCCAGCGCCT TCCACTGAACTGCTTATTCGGAAACTACCTTTCCAGCGCCT Direct Loss 0.937470658332062 0 0.7723769 0 prediction 0.874941316664125 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020909 chr6:26020909 synonymous SNV . 0 21 hPsi_associated_SNPs_2702 0 0 1 0 0 exosome 0.438812729934683 0 0.5447538 0 hPsi_site_743 iPseU_CNN:0.5447538;iRNA_PseU:0 744 chr1 150532578 150532578 1 + T C BLCA 150532578 + 150532558 150532598 41 TCCACATTGCCCCCTGGTGGTACAGGCCCGGCTCTGCGTCT TCCACATTGCCCCCTGGTGGCACAGGCCCGGCTCTGCGTCT Direct Loss 0.937465589010235 0 0.82115304 0 prediction 0.874931178020469 Functional Loss - ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150532578 chr1:150532578 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2703 0 0 0 0 1 Endoplasmic reticulum 0.438718584310279 0 0.64230608 0 hPsi_site_744 iPseU_CNN:0.64230608;iRNA_PseU:0 Hereditary breast and ovarian cancer syndrome Hereditary breast and ovarian cancer syndrome 745 chr1 54417802 54417802 1 + T C UCEC 54417802 + 54417782 54417822 41 GCCTGCAGAAGCCAAGGCCTTTCAGACTGTTCCCCAAAGGC GCCTGCAGAAGCCAAGGCCTCTCAGACTGTTCCCCAAAGGC Direct Loss 0.937456057886671 0 0.70001215 0 prediction 0.874912115773341 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54417802 chr1:54417802 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2704 0 0 1 0 0 Ribosome 0.438736377896473 0 0.4000243 0 hPsi_site_745 iPseU_CNN:0.4000243;iRNA_PseU:0 746 chr15 76225317 76225317 1 + A C UCEC 76225317 - 76225297 76225337 41 ACTATCCGATCACATCCAATTTCTCCATTTCCAAAGAAGCC ACTATCCGATCACATCCAATGTCTCCATTTCCAAAGAAGCC Direct Loss 0.937418378009914 0 0.28635782 0 prediction 0.874836756019828 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76225317 chr15:76225317 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2705 0 0 0 0 0 Cytosol 0.437503732393856 0 0 0 hPsi_site_746 iPseU_CNN:0;iRNA_PseU:0 747 chr19 14139104 14139104 1 + T C rs141281562 14139104 + 14139084 14139124 41 CTGAGGCCCGGGCAGCGCCTTACGGGGTCAGGCTTTGCGGC CTGAGGCCCGGGCAGCGCCTCACGGGGTCAGGCTTTGCGGC Direct Loss 0.937417368181627 0 0.8802025 0 prediction 0.874834736363254 Functional Loss - RLN3 ENSG00000171136 CDS Human protein_coding chr19:14139104 chr19:14139104 nonsynonymous SNV 0.096 5 21 hPsi_associated_SNPs_2706 0 0 0 0 0 exosome 0.438718592822045 0 0.760405 0 hPsi_site_747 iPseU_CNN:0.760405;iRNA_PseU:0 748 chr7 72849598 72849598 1 + T C LIHC 72849598 + 72849578 72849618 41 GTAGTTTCCTCCTGACCGGCTTCGTGGCCCTCTTCCACATC GTAGTTTCCTCCTGACCGGCCTCGTGGCCCTCTTCCACATC Direct Loss 0.937404420459809 0 0.9695842 0 prediction 0.874808840919618 Functional Loss - FZD9 ENSG00000188763 CDS Human protein_coding chr7:72849598 chr7:72849598 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_2707 0 0 0 0 0 exosome 0.438743418148469 0 0.9391684 0 hPsi_site_748 iPseU_CNN:0.9391684;iRNA_PseU:0 749 chr11 122430662 122430662 1 + T G rs188672814 122430662 + 122430642 122430682 41 TGAGTAATGGGTAGCCTGGATAGCTCAGTTGGTAGAGCATC TGAGTAATGGGTAGCCTGGAGAGCTCAGTTGGTAGAGCATC Direct Loss 0.937399100788153 0 0.3290907 0 prediction 0.874798201576306 Functional Loss - MIR100HG;UBASH3B ENSG00000253035;ENSG00000223265 intergenic Human other chr11:122430662 chr11:122430662 . . 0 21 hPsi_associated_SNPs_2708 0 0 1 0 0 unknown 0.438717487080724 0 0 0 hPsi_site_749 iPseU_CNN:0;iRNA_PseU:0 750 chr6 2785298 2785298 1 + T C STAD 2785298 + 2785278 2785318 41 CCCCAAAGTCCATTGAGGTGTACAGCGCCTACAACAACGTC CCCCAAAGTCCATTGAGGTGCACAGCGCCTACAACAACGTC Direct Loss 0.937329935414437 0 0.33089057 0 prediction 0.874659870828874 Functional Loss - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2785298 chr6:2785298 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2709 0 0 1 0 1 Ribosome 0.438714030937504 0 0 0 hPsi_site_750 iPseU_CNN:0;iRNA_PseU:0 751 chr15 76225229 76225229 1 + A T UCEC 76225229 - 76225209 76225249 41 CATTCCCCTTGGCTCTGTAATACTGAAAGCCCCTGCCAACG CATTCCCCTTGGCTCTGTAAAACTGAAAGCCCCTGCCAACG Direct Loss 0.937327266102069 0 0.7078235 0 prediction 0.874654532204138 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76225229 chr15:76225229 nonsynonymous SNV 0.612 0 21 hPsi_associated_SNPs_2710 0 0 0 0 0 Cytosol 0.438717727656824 0 0.415647 0 hPsi_site_751 iPseU_CNN:0.415647;iRNA_PseU:0 752 chr12 132322755 132322755 1 + T C SKCM 132322755 + 132322735 132322775 41 CTCAGGAGTGGCTAAGCAGGTTCGGTTACCTGCCCCCGGCT CTCAGGAGTGGCTAAGCAGGCTCGGTTACCTGCCCCCGGCT Direct Loss 0.937322561895745 0 0.87231266 0 prediction 0.874645123791489 Functional Loss - MMP17 ENSG00000198598 CDS Human protein_coding chr12:132322755 chr12:132322755 nonsynonymous SNV 0.983 2 21 hPsi_associated_SNPs_2711 0 0 0 0 1 Cytosol 0.438718592995102 0 0.74462532 0 hPsi_site_752 iPseU_CNN:0.74462532;iRNA_PseU:0 753 chr17 40817744 40817744 1 + T A COAD 40817744 + 40817724 40817764 41 CCACCCTGCGCTACCCCGGCTACATGAACAATGACCTCATC CCACCCTGCGCTACCCCGGCAACATGAACAATGACCTCATC Direct Loss 0.93731321431406 0 0.46317625 0 prediction 0.87462642862812 Functional Loss - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40817744 chr17:40817744 nonsynonymous SNV 0.976 4 21 hPsi_associated_SNPs_2712 0 0 0 0 1 Cytosol 0.447351694585965 0 0 0 hPsi_site_753 iPseU_CNN:0;iRNA_PseU:0 754 chr5 74066518 74066518 1 + T C OV 74066518 + 74066498 74066538 41 GAAACAGAAGTATTAAAAGTTATTCGAACAGGAAAGAGAAA GAAACAGAAGTATTAAAAGTCATTCGAACAGGAAAGAGAAA Direct Loss 0.937307198804854 0 0.5355003 0 prediction 0.874614397609708 Functional Loss - NSA2 ENSG00000164346 CDS Human protein_coding chr5:74066518 chr5:74066518 synonymous SNV . 0 21 hPsi_associated_SNPs_2713 0 0 1 0 1 Cytosol 0.434997993863679 0 0.0710006000000001 0 hPsi_site_754 iPseU_CNN:0.0710006000000001;iRNA_PseU:0 755 chr14 74426196 74426196 1 + A C GBM 74426196 - 74426176 74426216 41 GTTAACGGCATCCACAAATTTTTCCTCATCCATGCTAACTA GTTAACGGCATCCACAAATTGTTCCTCATCCATGCTAACTA Direct Loss 0.937305559325249 0 0.37944013 0 prediction 0.874611118650497 Functional Loss - COQ6 ENSG00000119723 CDS Human protein_coding chr14:74426196 chr14:74426196 nonsynonymous SNV 0.982 0 21 hPsi_associated_SNPs_2714 0 0 0 0 1 Ribosome 0.438718593023847 0 0 0 hPsi_site_755 iPseU_CNN:0;iRNA_PseU:0 756 chr20 54941180 54941180 1 + T C SKCM 54941180 + 54941160 54941200 41 CGGATTTAAAGAGTCCCTGGTACAGTCAAAAATGGCAGCAG CGGATTTAAAGAGTCCCTGGCACAGTCAAAAATGGCAGCAG Direct Loss 0.93725538011591 0 0.84551275 0 prediction 0.87451076023182 Functional Loss - FAM210B ENSG00000124098 CDS Human protein_coding chr20:54941180 chr20:54941180 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_2715 0 0 0 0 1 Ribosome 0.438718685416888 0 0.6910255 0 hPsi_site_756 iPseU_CNN:0.6910255;iRNA_PseU:0 757 chr7 5922210 5922210 1 + T G LUAD 5922210 + 5922190 5922230 41 AGGTGAAGGATGTTTTCCGGTTCATAGACAACGACCAGAGC AGGTGAAGGATGTTTTCCGGGTCATAGACAACGACCAGAGC Direct Loss 0.937253694849065 0 0.36025918 0 prediction 0.87450738969813 Functional Loss - OCM ENSG00000122543 CDS Human protein_coding chr7:5922210 chr7:5922210 nonsynonymous SNV 0.854 0 21 hPsi_associated_SNPs_2716 0 0 0 0 2 exosome 0.43871735087503 0 0 0 hPsi_site_757 iPseU_CNN:0;iRNA_PseU:0 758 chr20 23334859 23334859 1 + T C CESC 23334859 + 23334839 23334879 41 GACAAGAATCCTTGAGTGAGTTTTTTGAAATGTTGCCTTCC GACAAGAATCCTTGAGTGAGCTTTTTGAAATGTTGCCTTCC Direct Loss 0.937197540069478 0 0.44699714 0 prediction 0.874395080138955 Functional Loss - NXT1 ENSG00000132661 CDS Human protein_coding chr20:23334859 chr20:23334859 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2717 0 0 1 0 0 Ribosome 0.438718013042241 0 0 0 hPsi_site_758 iPseU_CNN:0;iRNA_PseU:0 759 chr17 6917798 6917798 1 + T A rs12135 6917798 + 6917778 6917818 41 AGGCTGGGGGGCTGTTCCGTTTCTCCACCCTTCGCTGTGTC AGGCTGGGGGGCTGTTCCGTATCTCCACCCTTCGCTGTGTC Direct Loss 0.937185607587175 0 0.73847026 0 prediction 0.874371215174349 Functional Loss - RNASEK-C17orf49 ENSG00000267047 ncRNA_intronic Human antisense chr17:6917798 chr17:6917798 . . 0 21 hPsi_associated_SNPs_2718 0 0 1 0 0 exosome 0.438717233520462 0 0.47694052 0 hPsi_site_759 iPseU_CNN:0.47694052;iRNA_PseU:0 760 chr4 120107215 120107215 1 + T G STAD 120107215 + 120107195 120107235 41 TATTGCTAACAGATCCCAGGTTTATGTCCTTTGTCAATCCC TATTGCTAACAGATCCCAGGGTTATGTCCTTTGTCAATCCC Direct Loss 0.937178134148031 0 0.5597512 0 prediction 0.874356268296062 Functional Loss - MYOZ2 ENSG00000172399 CDS Human protein_coding chr4:120107215 chr4:120107215 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_2719 0 0 0 0 0 exosome 0.438720965879096 0 0.1195024 0 hPsi_site_760 iPseU_CNN:0.1195024;iRNA_PseU:0 761 chr1 43130588 43130588 1 + T G UCEC 43130588 + 43130568 43130608 41 GGCCATTTGCAGATGAAAATTTTAAACTTAGACACTCAGCT GGCCATTTGCAGATGAAAATGTTAAACTTAGACACTCAGCT Direct Loss 0.937173974601654 0 0.56141925 0 prediction 0.874347949203307 Functional Loss - PPIH ENSG00000171960 CDS Human protein_coding chr1:43130588 chr1:43130588 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2720 0 0 1 0 2 Cytosol 0.438719285497317 0 0.1228385 0 hPsi_site_761 iPseU_CNN:0.1228385;iRNA_PseU:0 762 chr16 68104097 68104097 1 + T A rs559364311 68104097 + 68104077 68104117 41 GTCATCAAAGCCATTGCTGATACCCTCTCCATTCCTGTCAT GTCATCAAAGCCATTGCTGAAACCCTCTCCATTCCTGTCAT Direct Loss 0.937169441992101 0 0.8165258 0 prediction 0.874338883984202 Functional Loss - DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104097 chr16:68104097 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2721 0 0 1 0 2 Ribosome 0.43881667402471 0 0.6330516 0 hPsi_site_762 iPseU_CNN:0.6330516;iRNA_PseU:0 763 chr20 23017017 23017017 1 + T C rs2567609 23017017 + 23016997 23017037 41 AACCACGTGTCCCTTATCCTTAGCTATGCCAACAGCTGCGC AACCACGTGTCCCTTATCCTCAGCTATGCCAACAGCTGCGC Direct Loss 0.937019878844228 0 0.32222015 0 prediction 0.874039757688456 Functional Loss - SSTR4 ENSG00000132671 CDS Human protein_coding chr20:23017017 chr20:23017017 synonymous SNV . 0 21 hPsi_associated_SNPs_2722 0 0 0 0 0 exosome 0.438718673954104 0 0 0 hPsi_site_763 iPseU_CNN:0;iRNA_PseU:0 764 chr3 98250922 98250922 1 + T A UCEC 98250922 + 98250902 98250942 41 TATTTGGATTATTACTATGCTACGAGCCCAAACTCTGACAT TATTTGGATTATTACTATGCAACGAGCCCAAACTCTGACAT Direct Loss 0.937016464383559 0 0.5619464 0 prediction 0.874032928767117 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98250922 chr3:98250922 synonymous SNV . 0 21 hPsi_associated_SNPs_2723 0 0 0 0 0 exosome 0.438680163560274 0 0.1238928 0 hPsi_site_764 iPseU_CNN:0.1238928;iRNA_PseU:0 765 chr11 6898239 6898239 1 + T A rs137923849 6898239 + 6898219 6898259 41 GCCTCCTGGCCACCATGGCATATGACCGCTACGTGGCCATC GCCTCCTGGCCACCATGGCAAATGACCGCTACGTGGCCATC Direct Loss 0.937000324129289 0 0.8062116 0 prediction 0.874000648258578 Functional Loss - OR10A4 ENSG00000170782 CDS Human protein_coding chr11:6898239 chr11:6898239 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2724 0 0 0 0 0 exosome 0.438718628466844 0 0.6124232 0 hPsi_site_765 iPseU_CNN:0.6124232;iRNA_PseU:0 766 chr19 39423001 39423001 1 + T C rs2070251 39423001 + 39422981 39423021 41 CTGGTTCCCCGGCTCTGGGCTACCTGCTCCATGGCTACCCT CTGGTTCCCCGGCTCTGGGCCACCTGCTCCATGGCTACCCT Direct Loss 0.936997398600105 0 0.7544593 0 prediction 0.873994797200209 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423001 chr19:39423001 synonymous SNV . 0 21 hPsi_associated_SNPs_2725 0 0 1 0 1 Ribosome 0.438718594099375 0 0.5089186 0 hPsi_site_766 iPseU_CNN:0.5089186;iRNA_PseU:0 767 chr17 38610261 38610261 1 + T C UCEC 38610261 + 38610241 38610281 41 GCCGCACCCACGAGGACCTCTACATCATCCCCATCCCCAAC GCCGCACCCACGAGGACCTCCACATCATCCCCATCCCCAAC Direct Loss 0.936979515931647 0 0.5161094 0 prediction 0.873959031863293 Functional Loss - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610261 chr17:38610261 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2726 0 0 1 0 2 Nucleus 0.438896022086426 0 0.0322188000000001 0 hPsi_site_767 iPseU_CNN:0.0322188000000001;iRNA_PseU:0 768 chr2 27259433 27259433 1 + T G KIRP 27259433 + 27259413 27259453 41 GGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGA GGGCCCTGGGTCAAGCAGGTGTTGCCAACCTCACCGAGGGA Direct Loss 0.936958382797554 0 0.78321826 0 prediction 0.873916765595109 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27259433 chr2:27259433 nonsynonymous SNV 0.975 3 21 hPsi_associated_SNPs_2727 0 0 1 1 2 Ribosome 0.438718539223553 0 0.56643652 0 hPsi_site_768 iPseU_CNN:0.56643652;iRNA_PseU:0 769 chr10 102763345 102763345 1 + T G UCEC 102763345 + 102763325 102763365 41 GGGCTCCGTCCCTGCCTAGCTTCATGGGTCCTCGGGCCACC GGGCTCCGTCCCTGCCTAGCGTCATGGGTCCTCGGGCCACC Direct Loss 0.936954474761257 0 0.7972168 0 prediction 0.873908949522514 Functional Loss - LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763345 chr10:102763345 nonsynonymous SNV 0.983 1 21 hPsi_associated_SNPs_2728 0 0 1 0 1 Ribosome 0.438718192263043 0 0.5944336 0 hPsi_site_769 iPseU_CNN:0.5944336;iRNA_PseU:0 770 chr11 55861310 55861310 1 + T C GBM 55861310 + 55861290 55861330 41 TGATTCCAGCATCAATCATTTTTTTTGTGACACCACAGCTC TGATTCCAGCATCAATCATTCTTTTTGTGACACCACAGCTC Direct Loss 0.936934005321576 0 0.5191955 0 prediction 0.873868010643153 Functional Loss - OR8I2 ENSG00000172154 CDS Human protein_coding chr11:55861310 chr11:55861310 nonsynonymous SNV 0.104 1 21 hPsi_associated_SNPs_2729 0 0 0 0 0 unknown 0.431845308974044 0 0.0383910000000001 0 hPsi_site_770 iPseU_CNN:0.0383910000000001;iRNA_PseU:0 771 chr19 33695694 33695694 1 + T G LUSC 33695694 + 33695674 33695714 41 GCCCGCGACCATGTCTGGATTTTCTTCCACTCAGACGCCTC GCCCGCGACCATGTCTGGATGTTCTTCCACTCAGACGCCTC Direct Loss 0.936908860793446 0 0.5982806 0 prediction 0.873817721586893 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33695694 chr19:33695694 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2730 0 0 1 0 1 Ribosome 0.438719532065499 0 0.1965612 0 hPsi_site_771 iPseU_CNN:0.1965612;iRNA_PseU:0 772 chr6 27783040 27783040 1 + T C CESC 27783040 + 27783020 27783060 41 GTCAACGACATCTTTGAGCGTATCGCCGGAGAAGCGTCACG GTCAACGACATCTTTGAGCGCATCGCCGGAGAAGCGTCACG Direct Loss 0.936903442312736 0 0.5680877 0 prediction 0.873806884625471 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27783040 chr6:27783040 synonymous SNV . 0 21 hPsi_associated_SNPs_2731 0 0 1 0 0 nucleus 0.438737931897641 0 0.1361754 0 hPsi_site_772 iPseU_CNN:0.1361754;iRNA_PseU:0 773 chr2 27666330 27666330 1 + T A rs112908126 27666330 + 27666310 27666350 41 GGGGAGGCTGCTCTATCTGGTTACTGCTGTGTGGCTGCACT GGGGAGGCTGCTCTATCTGGATACTGCTGTGTGGCTGCACT Direct Loss 0.936876177146807 0 0.56229544 0 prediction 0.873752354293614 Functional Loss - KRTCAP3 ENSG00000157992 CDS Human protein_coding chr2:27666330 chr2:27666330 synonymous SNV . 0 21 hPsi_associated_SNPs_2732 0 0 1 0 2 Endoplasmic reticulum 0.438718590442502 0 0.12459088 0 hPsi_site_773 iPseU_CNN:0.12459088;iRNA_PseU:0 774 chr5 53751722 53751722 1 + T C PRAD 53751722 + 53751702 53751742 41 GCAGGCTGGATCATGCTTTATATGCACTGCCTGGGCCAACC GCAGGCTGGATCATGCTTTACATGCACTGCCTGGGCCAACC Direct Loss 0.936846283713024 0 0.3273086 0 prediction 0.873692567426048 Functional Loss - HSPB3 ENSG00000169271 CDS Human protein_coding chr5:53751722 chr5:53751722 nonsynonymous SNV 0.654 5 21 hPsi_associated_SNPs_2733 0 0 0 0 0 exosome 0.438108184824403 0 0 0 hPsi_site_774 iPseU_CNN:0;iRNA_PseU:0 775 chr14 101506628 101506628 1 + T C PCPG 101506628 + 101506608 101506648 41 TGTCTGCTGACCATCACCTTTAGAAGCCCCCTTTCGCTGAG TGTCTGCTGACCATCACCTTCAGAAGCCCCCTTTCGCTGAG Direct Loss 0.936838849463484 0 0.60585296 0 prediction 0.873677698926968 Functional Loss - MIR654 ENSG00000207934 ncRNA_exonic Human miRNA chr14:101506628 chr14:101506628 . . 0 21 hPsi_associated_SNPs_2734 0 0 0 0 0 unknown 0.438734299837453 0 0.21170592 0 hPsi_site_775 iPseU_CNN:0.21170592;iRNA_PseU:0 776 chr21 38581028 38581028 1 + T C rs75992575 38581028 + 38581008 38581048 41 GAGGGGAGACGGATGTCATCTACAATCACACAATACATGGG GAGGGGAGACGGATGTCATCCACAATCACACAATACATGGG Direct Loss 0.936830353210401 0 0.25659928 0 prediction 0.873660706420803 Functional Loss - DSCR9 ENSG00000230366 ncRNA_exonic Human lincRNA chr21:38581028 chr21:38581028 . . 0 21 hPsi_associated_SNPs_2735 0 0 0 0 2 unknown 0.438718221321351 0 0 0 hPsi_site_776 iPseU_CNN:0;iRNA_PseU:0 777 chrX 26213286 26213286 1 + T C rs138252531 26213286 + 26213266 26213306 41 CTGAAGTAGAATTTTCACTTTATGTTAGAAGAGAGTAGTGA CTGAAGTAGAATTTTCACTTCATGTTAGAAGAGAGTAGTGA Direct Loss 0.936797528529881 0 0.28124815 0 prediction 0.873595057059762 Functional Loss - MAGEB6 ENSG00000176746 UTR3 Human protein_coding chrX:26213286 chrX:26213286 . . 0 21 hPsi_associated_SNPs_2736 0 0 0 7 0 unknown 0.432648459155623 0 0 0 hPsi_site_777 iPseU_CNN:0;iRNA_PseU:0 778 chr14 93652850 93652850 1 + T A SKCM 93652850 + 93652830 93652870 41 GTGGACAGTTATTTTTCTGGTACCTTACTTACAGATGTTTT GTGGACAGTTATTTTTCTGGAACCTTACTTACAGATGTTTT Direct Loss 0.936789747245406 0 0.5551127 0 prediction 0.873579494490812 Functional Loss - TMEM251 ENSG00000153485;ENSG00000259066 exonic;splicing Human other chr14:93652850 chr14:93652850 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_2737 0 0 1 0 0 Ribosome 0.438744006245547 0 0.1102254 0 hPsi_site_778 iPseU_CNN:0.1102254;iRNA_PseU:0 779 chr19 13247140 13247140 1 + T C LUAD 13247140 + 13247120 13247160 41 GCGTCTCTCCCGGCTGAACTTATCAACCAGATTGGGAACCG GCGTCTCTCCCGGCTGAACTCATCAACCAGATTGGGAACCG Direct Loss 0.936780460378 0 0.8383035 0 prediction 0.873560920756 Functional Loss - NACC1 ENSG00000160877 CDS Human protein_coding chr19:13247140 chr19:13247140 synonymous SNV . 0 21 hPsi_associated_SNPs_2738 0 0 1 0 2 Ribosome 0.438443044236377 0 0.676607 0 hPsi_site_779 iPseU_CNN:0.676607;iRNA_PseU:0 780 chr22 51159741 51159741 1 + T C rs576803553 51159741 + 51159721 51159761 41 GGGTCCCTGGCTTCCCCGGCTTTCTCCCCACGGAGCCCAGC GGGTCCCTGGCTTCCCCGGCCTTCTCCCCACGGAGCCCAGC Direct Loss 0.936778841602025 0 0.8126334 0 prediction 0.873557683204049 Functional Loss - SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51159741 chr22:51159741 synonymous SNV . 0 21 hPsi_associated_SNPs_2739 0 0 1 0 0 cytosol 0.438718566935789 0 0.6252668 0 hPsi_site_780 iPseU_CNN:0.6252668;iRNA_PseU:0 781 chr9 1056581 1056581 1 + T C UCEC 1056581 + 1056561 1056601 41 ATGTCAGCGTGGCCACAACTTATAGACAGTATCCCTTGTCC ATGTCAGCGTGGCCACAACTCATAGACAGTATCCCTTGTCC Direct Loss 0.936768956094373 0 0.6756148 0 prediction 0.873537912188746 Functional Loss - DMRT2 ENSG00000173253 CDS Human protein_coding chr9:1056581 chr9:1056581 nonsynonymous SNV 0.968 4 21 hPsi_associated_SNPs_2740 0 0 0 3 0 Cytosol 0.438716918039664 0 0.3512296 0 hPsi_site_781 iPseU_CNN:0.3512296;iRNA_PseU:0 782 chr7 141490747 141490747 1 + T C UCEC 141490747 + 141490727 141490767 41 GGATGCTGATTGTCTCTTTGTATACACACCACAAGAAGATG GGATGCTGATTGTCTCTTTGCATACACACCACAAGAAGATG Direct Loss 0.936760776426016 0 0.702253 0 prediction 0.873521552852033 Functional Loss - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490747 chr7:141490747 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2741 0 0 1 0 0 nucleolus 0.427476276691122 0 0.404506 0 hPsi_site_782 iPseU_CNN:0.404506;iRNA_PseU:0 783 chr12 58174322 58174322 1 + T C SKCM 58174322 + 58174302 58174342 41 AGCATGGGACAGAGAGCTTCTTTCAGCACCTCCTGCCCCAG AGCATGGGACAGAGAGCTTCCTTCAGCACCTCCTGCCCCAG Direct Loss 0.936747736423012 0 0.62296605 0 prediction 0.873495472846023 Functional Loss - EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58174322 chr12:58174322 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2742 0 0 1 0 0 unknown 0.438715956316027 0 0.2459321 0 hPsi_site_783 iPseU_CNN:0.2459321;iRNA_PseU:0 not specified not specified 784 chr11 5410687 5410687 1 + T G GBM 5410687 + 5410667 5410707 41 GCTATCCAACATTACTCAGTTTAGCCCCATATTCTATCTCA GCTATCCAACATTACTCAGTGTAGCCCCATATTCTATCTCA Direct Loss 0.936744961317428 0 0.67043984 0 prediction 0.873489922634856 Functional Loss - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410687 chr11:5410687 nonsynonymous SNV 0.060 0 21 hPsi_associated_SNPs_2743 0 0 0 0 0 nucleoplasm 0.438721125394672 0 0.34087968 0 hPsi_site_784 iPseU_CNN:0.34087968;iRNA_PseU:0 785 chr3 52283790 52283790 1 + T G UCS 52283790 + 52283770 52283810 41 TGACGTCTCTGTGTTCGTGATTCCCTTGCACAGTCAGGGCC TGACGTCTCTGTGTTCGTGAGTCCCTTGCACAGTCAGGGCC Direct Loss 0.936738755071134 0 0.37011546 0 prediction 0.873477510142268 Functional Loss - PPM1M ENSG00000164088 CDS Human protein_coding chr3:52283790 chr3:52283790 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2744 0 0 1 0 0 chromatin 0.438719721888053 0 0 0 hPsi_site_785 iPseU_CNN:0;iRNA_PseU:0 786 chr14 101351118 101351118 1 + T C ACC 101351118 + 101351098 101351138 41 CAAATGAGTCTTCAGAGGGTTCTATCATTTCGTCGGATGGA CAAATGAGTCTTCAGAGGGTCCTATCATTTCGTCGGATGGA Direct Loss 0.936725581252684 0 0.29110754 0 prediction 0.873451162505367 Functional Loss - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101351118 chr14:101351118 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2745 0 0 0 0 0 exosome 0.437247493810429 0 0 0 hPsi_site_786 iPseU_CNN:0;iRNA_PseU:0 787 chr19 4793524 4793524 1 + A G BLCA 4793524 - 4793504 4793544 41 AGGGGAATCTGCCCACGGGATAGCGGCCCACGTTTGTGGTG AGGGGAATCTGCCCACGGGACAGCGGCCCACGTTTGTGGTG Direct Loss 0.936722687726381 0 0.59461147 0 prediction 0.873445375452762 Functional Loss - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793524 chr19:4793524 nonsynonymous SNV 0.710 1 21 hPsi_associated_SNPs_2746 0 0 0 0 0 Ribosome 0.438718592823209 0 0.18922294 0 hPsi_site_787 iPseU_CNN:0.18922294;iRNA_PseU:0 788 chr1 44437630 44437630 1 + T C LGG 44437630 + 44437610 44437650 41 CTAGCCCCCCAGCTTTCTGGTAGCTTCTTCCAGCCTATACT CTAGCCCCCCAGCTTTCTGGCAGCTTCTTCCAGCCTATACT Direct Loss 0.936690541933473 0 0.3586583 0 prediction 0.873381083866945 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437630 chr1:44437630 synonymous SNV . 0 21 hPsi_associated_SNPs_2747 0 0 0 0 0 nucleolus 0.438718592995102 0 0 0 hPsi_site_788 iPseU_CNN:0;iRNA_PseU:0 789 chr7 141418958 141418958 1 + T C UCEC 141418958 + 141418938 141418978 41 ATTGGGGTTGGCGAATTTGGTACAGTCTACAAGTGCATTAA ATTGGGGTTGGCGAATTTGGCACAGTCTACAAGTGCATTAA Direct Loss 0.93667624044699 0 0.651165 0 prediction 0.873352480893981 Functional Loss - WEE2 ENSG00000214102 CDS Human protein_coding chr7:141418958 chr7:141418958 synonymous SNV . 0 21 hPsi_associated_SNPs_2748 0 0 0 0 2 exosome 0.438718630651003 0 0.30233 0 hPsi_site_789 iPseU_CNN:0.30233;iRNA_PseU:0 790 chr1 154960867 154960867 1 + T G ESCA 154960867 + 154960847 154960887 41 AGGGGAAGGCTGGGAGAAGCTATCATTGGTGCCCTCCTCTG AGGGGAAGGCTGGGAGAAGCGATCATTGGTGCCCTCCTCTG Direct Loss 0.936590335410504 0 0.44695276 0 prediction 0.873180670821007 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960867 chr1:154960867 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_2749 0 0 1 0 0 Cytosol 0.438718592995322 0 0 0 hPsi_site_790 iPseU_CNN:0;iRNA_PseU:0 791 chr7 139879192 139879192 1 + T A rs185803632 139879192 + 139879172 139879212 41 GGTGGATTTCTTATGAATGGTTTAGTACCATCCACTTTGTA GGTGGATTTCTTATGAATGGATTAGTACCATCCACTTTGTA Direct Loss 0.9365825880285 0 0.62731814 0 prediction 0.873165176057 Functional Loss - JHDM1D-AS1 ENSG00000260231 ncRNA_exonic Human antisense chr7:139879192 chr7:139879192 . . 0 21 hPsi_associated_SNPs_2750 0 0 0 0 0 unknown 0.438718592995102 0 0.25463628 0 hPsi_site_791 iPseU_CNN:0.25463628;iRNA_PseU:0 792 chr19 15198764 15198764 1 + T C rs12975625 15198764 + 15198744 15198784 41 TACAGCATACGGAACAAGGATATGAAGGCAGCCCTGGGGAA TACAGCATACGGAACAAGGACATGAAGGCAGCCCTGGGGAA Direct Loss 0.936563448997511 0 0.3034008 0 prediction 0.873126897995022 Functional Loss - OR1I1 ENSG00000094661 CDS Human protein_coding chr19:15198764 chr19:15198764 synonymous SNV . 0 21 hPsi_associated_SNPs_2751 0 0 0 0 0 unknown 0.438718593020551 0 0 0 hPsi_site_792 iPseU_CNN:0;iRNA_PseU:0 793 chr17 79214814 79214814 1 + T G DLBC 79214814 + 79214794 79214834 41 AGACGCTGGAGGGAGGCTGTTAGGAGGGACTCTGAGCTTCA AGACGCTGGAGGGAGGCTGTGAGGAGGGACTCTGAGCTTCA Direct Loss 0.936552492280275 0 0.7366829 0 prediction 0.87310498456055 Functional Loss - NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79214814 chr17:79214814 stoploss 0.109 0 21 hPsi_associated_SNPs_2752 0 0 1 0 1 unknown 0.438712848146249 0 0.4733658 0 hPsi_site_793 iPseU_CNN:0.4733658;iRNA_PseU:0 794 chr7 31747856 31747856 1 + T C rs113797486 31747856 + 31747836 31747876 41 TGGATGCCCAGGGGAAGGCATACAGGCCTCATCCACCAGGC TGGATGCCCAGGGGAAGGCACACAGGCCTCATCCACCAGGC Direct Loss 0.936541671418148 0 0.38501573 0 prediction 0.873083342836296 Functional Loss - PPP1R17 ENSG00000106341 UTR3 Human protein_coding chr7:31747856 chr7:31747856 . . 0 21 hPsi_associated_SNPs_2753 0 0 0 0 0 exosome 0.438718595972722 0 0 0 hPsi_site_794 iPseU_CNN:0;iRNA_PseU:0 795 chr16 67912502 67912502 1 + T A COAD 67912502 + 67912482 67912522 41 CGAGAGTTAAAGATGTGGTGTACAGTATCCTGGACCTGCCT CGAGAGTTAAAGATGTGGTGAACAGTATCCTGGACCTGCCT Direct Loss 0.936535343238637 0 0.5538383 0 prediction 0.873070686477274 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67912502 chr16:67912502 stopgain 0.999 1 21 hPsi_associated_SNPs_2754 0 0 1 0 1 Cytosol 0.438718586690971 0 0.1076766 0 hPsi_site_795 iPseU_CNN:0.1076766;iRNA_PseU:0 796 chr7 141464298 141464298 1 + T C COAD 141464298 + 141464278 141464318 41 ACTGCCTGAAAATCGCCAGTTTCTCTCACCCCACATTCCTC ACTGCCTGAAAATCGCCAGTCTCTCTCACCCCACATTCCTC Direct Loss 0.936455907551273 0 0.8085251 0 prediction 0.872911815102545 Functional Loss - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464298 chr7:141464298 nonsynonymous SNV 0.962 3 21 hPsi_associated_SNPs_2755 0 0 1 0 0 exosome 0.438947496515307 0 0.6170502 0 hPsi_site_796 iPseU_CNN:0.6170502;iRNA_PseU:0 797 chr12 57619528 57619528 1 + T G STAD 57619528 + 57619508 57619548 41 GTGAGCACCCCTACTTCGGATAGCGCCCCTCCCCAGCCAGT GTGAGCACCCCTACTTCGGAGAGCGCCCCTCCCCAGCCAGT Direct Loss 0.936449812717248 0 0.6056688 0 prediction 0.872899625434497 Functional Loss - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619528 chr12:57619528 stoploss 0.787 0 21 hPsi_associated_SNPs_2756 0 0 1 0 0 exosome 0.43879515876155 0 0.2113376 0 hPsi_site_797 iPseU_CNN:0.2113376;iRNA_PseU:0 798 chr1 111890377 111890377 1 + T C LUSC 111890377 + 111890357 111890397 41 GAGCCAGAACAGCTGTGAGGTTTAAGCCAATACAGAAGGTA GAGCCAGAACAGCTGTGAGGCTTAAGCCAATACAGAAGGTA Direct Loss 0.93642506267412 0 0.47806197 0 prediction 0.87285012534824 Functional Loss - PIFO ENSG00000173947 CDS Human protein_coding chr1:111890377 chr1:111890377 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2757 0 0 0 0 2 exosome 0.43872026868775 0 0 0 hPsi_site_798 iPseU_CNN:0;iRNA_PseU:0 799 chr8 102381499 102381499 1 + T G UCS 102381499 + 102381479 102381519 41 GCTTCGGATACCTACATGGTTTTTGGGGAAGCCAAGATTGA GCTTCGGATACCTACATGGTGTTTGGGGAAGCCAAGATTGA Direct Loss 0.936423682898542 0 0.9284024 0 prediction 0.872847365797085 Functional Loss - NACAP1 ENSG00000228224 ncRNA_exonic Human transcribed_processed_pseudogene chr8:102381499 chr8:102381499 . . 0 21 hPsi_associated_SNPs_2758 0 0 0 0 0 unknown 0.438718592995102 0 0.8568048 0 hPsi_site_799 iPseU_CNN:0.8568048;iRNA_PseU:0 800 chr15 74238810 74238810 1 + T G UCEC 74238810 + 74238790 74238830 41 ATGTGCGGGTGCTACTGCGCTTCCCCCAGCGCGTGAAGAAC ATGTGCGGGTGCTACTGCGCGTCCCCCAGCGCGTGAAGAAC Direct Loss 0.936423305635988 0 0.71944624 0 prediction 0.872846611271975 Functional Loss - LOXL1 ENSG00000129038 CDS Human protein_coding chr15:74238810 chr15:74238810 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2759 0 0 1 0 2 exosome 0.438719165186321 0 0.43889248 0 hPsi_site_800 iPseU_CNN:0.43889248;iRNA_PseU:0 801 chr3 184063775 184063775 1 + T C rs17774396 184063775 + 184063755 184063795 41 TCTGAATGAAAGGCCAAGGCTACAGTACAGGGCCCCACCCC TCTGAATGAAAGGCCAAGGCCACAGTACAGGGCCCCACCCC Direct Loss 0.93629355278828 0 0.44333842 0 prediction 0.872587105576559 Functional Loss - FAM131A ENSG00000175182 UTR3 Human protein_coding chr3:184063775 chr3:184063775 . . 0 21 hPsi_associated_SNPs_2760 0 0 0 1 0 chromatin 0.438718094763093 0 0 0 hPsi_site_801 iPseU_CNN:0;iRNA_PseU:0 802 chr1 35250892 35250892 1 + T A rs80297119 35250892 + 35250872 35250912 41 GCCCCAACATCGTGGACTGCTACATTGCCCGACCTACCGAG GCCCCAACATCGTGGACTGCAACATTGCCCGACCTACCGAG Direct Loss 0.936292682729197 0 0.44625786 0 prediction 0.872585365458393 Functional Loss - GJB3 ENSG00000188910 CDS Human protein_coding chr1:35250892 chr1:35250892 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2761 0 0 0 0 0 Ribosome 0.438730141673823 0 0 0 hPsi_site_802 iPseU_CNN:0;iRNA_PseU:0 803 chr17 72764657 72764657 1 + T A COAD 72764657 + 72764637 72764677 41 GACTCCACAGCGCCCTCGTCTACCTCCTCCTCCGACCCCAT GACTCCACAGCGCCCTCGTCAACCTCCTCCTCCGACCCCAT Direct Loss 0.936274918141844 0 0.76527894 0 prediction 0.872549836283689 Functional Loss - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764657 chr17:72764657 synonymous SNV . 0 21 hPsi_associated_SNPs_2762 0 0 1 0 1 Ribosome 0.438721285128442 0 0.53055788 0 hPsi_site_803 iPseU_CNN:0.53055788;iRNA_PseU:0 804 chr11 59560957 59560957 1 + T C rs34900239 59560957 + 59560937 59560977 41 AAGGAGCTTCACGACATGTTTATGGACATCGCCATGCTGGT AAGGAGCTTCACGACATGTTCATGGACATCGCCATGCTGGT Direct Loss 0.936267092774655 0 0.50468427 0 prediction 0.872534185549311 Functional Loss - STX3 ENSG00000166900 CDS Human protein_coding chr11:59560957 chr11:59560957 synonymous SNV . 0 21 hPsi_associated_SNPs_2763 0 0 1 0 1 Cytosol 0.438749346318266 0 0.00936854000000009 0 hPsi_site_804 iPseU_CNN:0.00936854000000009;iRNA_PseU:0 805 chr17 51901084 51901084 1 + A G rs3803825 51901084 - 51901064 51901104 41 GTGATGATATCCAGGTCCTTTAAGGTTGTCTCTCGCTGGTT GTGATGATATCCAGGTCCTTCAAGGTTGTCTCTCGCTGGTT Direct Loss 0.936250100047581 0 0.5784422 0 prediction 0.872500200095162 Functional Loss - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901084 chr17:51901084 synonymous SNV . 0 21 hPsi_associated_SNPs_2764 0 1 0 0 1 exosome 0.438718674996813 0 0.1568844 0 hPsi_site_805 iPseU_CNN:0.1568844;iRNA_PseU:0 806 chr3 98251609 98251609 1 + T A COAD 98251609 + 98251589 98251629 41 AAATCTATAAAGATCATCTTTATTGTCGTGGCAGCCTTTCT AAATCTATAAAGATCATCTTAATTGTCGTGGCAGCCTTTCT Direct Loss 0.936220412563936 0 0.32290983 0 prediction 0.872440825127872 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251609 chr3:98251609 nonsynonymous SNV 0.060 0 21 hPsi_associated_SNPs_2765 0 0 0 0 0 exosome 0.438745422831322 0 0 0 hPsi_site_806 iPseU_CNN:0;iRNA_PseU:0 807 chr12 48359688 48359688 1 + T C rs35500826 48359688 + 48359668 48359708 41 GTTTGGTGGTTTTCTTCCTGTTTCCGCATTCAGTCCTTGTG GTTTGGTGGTTTTCTTCCTGCTTCCGCATTCAGTCCTTGTG Direct Loss 0.936189495881304 0 0.35466188 0 prediction 0.872378991762607 Functional Loss - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48359688 chr12:48359688 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2766 0 0 1 0 2 Ribosome 0.438717994405006 0 0 0 hPsi_site_807 iPseU_CNN:0;iRNA_PseU:0 808 chr1 228285628 228285628 1 + T C STAD 228285628 + 228285608 228285648 41 CACTACGCCACAGGAACTGGTACATTCAGGCCACCTGCGCC CACTACGCCACAGGAACTGGCACATTCAGGCCACCTGCGCC Direct Loss 0.936174040595081 0 0.9461182 0 prediction 0.872348081190163 Functional Loss - ARF1 ENSG00000143761 CDS Human protein_coding chr1:228285628 chr1:228285628 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2767 0 0 1 0 1 Cytosol 0.438759099479747 0 0.8922364 0 hPsi_site_808 iPseU_CNN:0.8922364;iRNA_PseU:0 809 chr2 233275202 233275202 1 + T C rs150715519 233275202 + 233275182 233275222 41 AAGTCACAGCCACTCAGATGTTCGACGCCCCCTAAGGTCCA AAGTCACAGCCACTCAGATGCTCGACGCCCCCTAAGGTCCA Direct Loss 0.936146597222818 0 0.70136535 0 prediction 0.872293194445635 Functional Loss - ALPPL2 ENSG00000163286 UTR3 Human protein_coding chr2:233275202 chr2:233275202 . . 0 21 hPsi_associated_SNPs_2768 0 0 0 1 0 exosome 0.438710316158515 0 0.4027307 0 hPsi_site_809 iPseU_CNN:0.4027307;iRNA_PseU:0 810 chr1 2493204 2493204 1 + T C UCEC 2493204 + 2493184 2493224 41 GAGCCTCGTCATCGTCATTGTTTGCTCCACAGTTGGCCTAA GAGCCTCGTCATCGTCATTGCTTGCTCCACAGTTGGCCTAA Direct Loss 0.936136064766321 0 0.4432704 0 prediction 0.872272129532642 Functional Loss - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2493204 chr1:2493204 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_2769 0 0 1 0 2 Ribosome 0.438690979517491 0 0 0 hPsi_site_810 iPseU_CNN:0;iRNA_PseU:0 811 chr19 16344406 16344406 1 + T A LUAD 16344406 + 16344386 16344426 41 GTGTCAAGTTCGAGATCCCTTACTTCACTACCTCCGGCATC GTGTCAAGTTCGAGATCCCTAACTTCACTACCTCCGGCATC Direct Loss 0.936094965987993 0 0.8819682 0 prediction 0.872189931975985 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16344406 chr19:16344406 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2770 0 0 1 0 1 Ribosome 0.438652249290849 0 0.7639364 0 hPsi_site_811 iPseU_CNN:0.7639364;iRNA_PseU:0 812 chr14 50360592 50360592 1 + T G STAD 50360592 + 50360572 50360612 41 ACCACCATTCCCACTGTGGGTTTCAACGTGGAGACGGTGAC ACCACCATTCCCACTGTGGGGTTCAACGTGGAGACGGTGAC Direct Loss 0.936072285184919 0 0.25856987 0 prediction 0.872144570369838 Functional Loss - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360592 chr14:50360592 synonymous SNV . 0 21 hPsi_associated_SNPs_2771 0 0 1 0 0 Cytosol 0.437975325875664 0 0 0 hPsi_site_812 iPseU_CNN:0;iRNA_PseU:0 813 chr20 9496233 9496233 1 + T C LUAD 9496233 + 9496213 9496253 41 GCAGAGTTTGCAGCCAAATTTATTGTACCTTATGATGTGTG GCAGAGTTTGCAGCCAAATTCATTGTACCTTATGATGTGTG Direct Loss 0.936055031078478 0 0.33397418 0 prediction 0.872110062156956 Functional Loss - LAMP5 ENSG00000125869 CDS Human protein_coding chr20:9496233 chr20:9496233 synonymous SNV . 0 21 hPsi_associated_SNPs_2772 0 0 0 0 1 exosome 0.438553701435757 0 0 0 hPsi_site_813 iPseU_CNN:0;iRNA_PseU:0 814 chr11 130079714 130079714 1 + T C STAD 130079714 + 130079694 130079734 41 GATCAAAGAGAACACTGGGGTATAGGGGCCGGGGCCACCCA GATCAAAGAGAACACTGGGGCATAGGGGCCGGGGCCACCCA Direct Loss 0.936012621473523 0 0.38120678 0 prediction 0.872025242947046 Functional Loss - ST14 ENSG00000149418 CDS Human protein_coding chr11:130079714 chr11:130079714 nonsynonymous SNV 0.298 3 21 hPsi_associated_SNPs_2773 0 0 0 0 0 Ribosome 0.438716540993838 0 0 0 hPsi_site_814 iPseU_CNN:0;iRNA_PseU:0 815 chr12 13061677 13061677 1 + T A SKCM 13061677 + 13061657 13061697 41 TAGGACCAACGTCAATGTCTTTTCTGAGCTTTCCGCTCCTC TAGGACCAACGTCAATGTCTATTCTGAGCTTTCCGCTCCTC Direct Loss 0.935978658017082 0 0.71338016 0 prediction 0.871957316034163 Functional Loss - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061677 chr12:13061677 nonsynonymous SNV 0.815 4 21 hPsi_associated_SNPs_2774 0 0 1 0 0 Nucleus 0.438668492359579 0 0.42676032 0 hPsi_site_815 iPseU_CNN:0.42676032;iRNA_PseU:0 816 chr4 96761757 96761757 1 + T C COAD 96761757 + 96761737 96761777 41 GGAAAAGGAGGATCGATGCATATGTATACCAAGAACTTCTA GGAAAAGGAGGATCGATGCACATGTATACCAAGAACTTCTA Direct Loss 0.935895209367305 0 0.54580736 0 prediction 0.871790418734609 Functional Loss - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761757 chr4:96761757 synonymous SNV . 0 21 hPsi_associated_SNPs_2775 0 0 0 0 0 unknown 0.438580204649519 0 0.0916147199999999 0 hPsi_site_816 iPseU_CNN:0.0916147199999999;iRNA_PseU:0 817 chr19 53762721 53762721 1 + T G LUSC 53762721 + 53762701 53762741 41 GTTTTCCAACTATTAGCCCTTTTGTTCTCATGTGCCGTGAC GTTTTCCAACTATTAGCCCTGTTGTTCTCATGTGCCGTGAC Direct Loss 0.93588359343136 0 0.47124732 0 prediction 0.871767186862719 Functional Loss - VN1R2 ENSG00000196131 CDS Human protein_coding chr19:53762721 chr19:53762721 nonsynonymous SNV 0.008 3 21 hPsi_associated_SNPs_2776 0 0 0 0 0 unknown 0.438729137856074 0 0 0 hPsi_site_817 iPseU_CNN:0;iRNA_PseU:0 818 chr1 53580472 53580472 1 + T G UCEC 53580472 + 53580452 53580492 41 CGGCTGAGCTCATGATGGGCTTCCCACTCTGCTCCGTGGTC CGGCTGAGCTCATGATGGGCGTCCCACTCTGCTCCGTGGTC Direct Loss 0.935711642206721 0 0.57037103 0 prediction 0.871423284413443 Functional Loss - SLC1A7 ENSG00000162383 CDS Human protein_coding chr1:53580472 chr1:53580472 nonsynonymous SNV 0.945 0 21 hPsi_associated_SNPs_2777 0 0 0 0 0 Cytosol 0.438639189418904 0 0.14074206 0 hPsi_site_818 iPseU_CNN:0.14074206;iRNA_PseU:0 819 chr3 142511756 142511756 1 + T A OV 142511756 + 142511736 142511776 41 CATTTGCAAATGTTCTAAGTTATCTTCGTCTCTTTTTTATG CATTTGCAAATGTTCTAAGTAATCTTCGTCTCTTTTTTATG Direct Loss 0.935694930964366 0 0.5721344 0 prediction 0.871389861928733 Functional Loss - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142511756 chr3:142511756 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2778 0 0 1 0 2 Ribosome 0.438709339311913 0 0.1442688 0 hPsi_site_819 iPseU_CNN:0.1442688;iRNA_PseU:0 820 chr9 34989662 34989662 1 + T A rs191225217 34989662 + 34989642 34989682 41 GCTGAGTGACAGGAAGACGGTTCAATGGGCGGCGCGGAGGC GCTGAGTGACAGGAAGACGGATCAATGGGCGGCGCGGAGGC Direct Loss 0.935647839818533 0 0.69196606 0 prediction 0.871295679637066 Functional Loss - DNAJB5 ENSG00000137094 UTR5 Human protein_coding chr9:34989662 chr9:34989662 . . 0 21 hPsi_associated_SNPs_2779 0 0 0 0 0 exosome 0.438764517138297 0 0.38393212 0 hPsi_site_820 iPseU_CNN:0.38393212;iRNA_PseU:0 821 chr15 89155061 89155061 1 + T C CESC 89155061 + 89155041 89155081 41 CCTTGCAGAACTGGCCTGGATACAGAGTGGACCGGCTGGCC CCTTGCAGAACTGGCCTGGACACAGAGTGGACCGGCTGGCC Direct Loss 0.93564655961143 0 0.39207593 0 prediction 0.87129311922286 Functional Loss - MIR7-2 ENSG00000207703 ncRNA_exonic Human miRNA chr15:89155061 chr15:89155061 . . 0 21 hPsi_associated_SNPs_2780 0 0 0 0 0 unknown 0.438718592994039 0 0 0 hPsi_site_821 iPseU_CNN:0;iRNA_PseU:0 822 chr13 25671465 25671465 1 + T C LUSC 25671465 + 25671445 25671485 41 GCAAAGAAGAGCGCCAGGCTTACCTCACTAACGAGTATATG GCAAAGAAGAGCGCCAGGCTCACCTCACTAACGAGTATATG Direct Loss 0.935617983030061 0 0.6534407 0 prediction 0.871235966060121 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671465 chr13:25671465 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_2781 0 0 0 0 0 Cytosol 0.439219891344014 0 0.3068814 0 hPsi_site_822 iPseU_CNN:0.3068814;iRNA_PseU:0 823 chr13 33629261 33629261 1 + T C COAD 33629261 + 33629241 33629281 41 GTTTCGAGTGGCACAGAGGTTACAGCATCAGGCGTGGACTC GTTTCGAGTGGCACAGAGGTCACAGCATCAGGCGTGGACTC Direct Loss 0.935595503773407 0 0.3284096 0 prediction 0.871191007546813 Functional Loss - KL ENSG00000133116 CDS Human protein_coding chr13:33629261 chr13:33629261 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2782 0 0 0 0 1 exosome 0.437810522608159 0 0 0 hPsi_site_823 iPseU_CNN:0;iRNA_PseU:0 824 chr1 221054662 221054662 1 + T A LUSC 221054662 + 221054642 221054682 41 TTCTGCAATCCTGAGTCCCTTAAACTCGAACCCAAGAAATT TTCTGCAATCCTGAGTCCCTAAAACTCGAACCCAAGAAATT Direct Loss 0.935577310387877 0 0.45401686 0 prediction 0.871154620775754 Functional Loss - HLX ENSG00000136630 CDS Human protein_coding chr1:221054662 chr1:221054662 stopgain 0.993 1 21 hPsi_associated_SNPs_2783 0 0 0 0 1 exosome 0.43871867514825 0 0 0 hPsi_site_824 iPseU_CNN:0;iRNA_PseU:0 825 chr12 8290829 8290829 1 + T C COAD 8290829 + 8290809 8290849 41 AGATGGGGCTGGAATGATGTTAATTGTCTTGGTCCTCAAAG AGATGGGGCTGGAATGATGTCAATTGTCTTGGTCCTCAAAG Direct Loss 0.935555756067841 0 0.5580441 0 prediction 0.871111512135682 Functional Loss - CLEC4A ENSG00000111729 CDS Human protein_coding chr12:8290829 chr12:8290829 synonymous SNV . 0 21 hPsi_associated_SNPs_2784 0 0 1 0 1 exosome 0.438707536002944 0 0.1160882 0 hPsi_site_825 iPseU_CNN:0.1160882;iRNA_PseU:0 826 chr14 59113586 59113586 1 + T C UCEC 59113586 + 59113566 59113606 41 GTGAGGACGAGCAGAGCAATTACACCACCAACTGCTTCGGG GTGAGGACGAGCAGAGCAATCACACCACCAACTGCTTCGGG Direct Loss 0.935530672606397 0 0.73187363 0 prediction 0.871061345212794 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113586 chr14:59113586 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2785 0 0 1 0 0 exosome 0.438715711978972 0 0.46374726 0 hPsi_site_826 iPseU_CNN:0.46374726;iRNA_PseU:0 827 chr19 45911874 45911874 1 + A G UCEC 45911874 - 45911854 45911894 41 TCTTTCAGCTGCTGATTTTTTTTCTTCTTCTTCTTCCGCAC TCTTTCAGCTGCTGATTTTTCTTCTTCTTCTTCTTCCGCAC Direct Loss 0.935521162157287 0 0.4955598 0 prediction 0.871042324314574 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45911874 chr19:45911874 synonymous SNV . 0 21 hPsi_associated_SNPs_2786 0 0 1 0 0 Ribosome 0.438711879268396 0 0 0 hPsi_site_827 iPseU_CNN:0;iRNA_PseU:0 828 chr5 112888972 112888972 1 + T C UCEC 112888972 + 112888952 112888992 41 ACAGAGAGCTCCTGAAAGCTTATCATCATAGTTTCGATGAT ACAGAGAGCTCCTGAAAGCTCATCATCATAGTTTCGATGAT Direct Loss 0.935521014325387 0 0.28441316 0 prediction 0.871042028650773 Functional Loss - YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112888972 chr5:112888972 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2787 0 0 1 0 2 Cytosol 0.438712865479665 0 0 0 hPsi_site_828 iPseU_CNN:0;iRNA_PseU:0 829 chr14 103397120 103397120 1 + T C rs34124488 103397120 + 103397100 103397140 41 CCCCCAAACCTCCCCTTCCTTTCCCCCTCCTCCGGGGGCCA CCCCCAAACCTCCCCTTCCTCTCCCCCTCCTCCGGGGGCCA Direct Loss 0.935489790278158 0 0.3225879 0 prediction 0.870979580556316 Functional Loss - AMN ENSG00000166126 UTR3 Human protein_coding chr14:103397120 chr14:103397120 . . 0 21 hPsi_associated_SNPs_2788 0 0 1 0 0 Endoplasmic reticulum 0.438718592995102 0 0 0 hPsi_site_829 iPseU_CNN:0;iRNA_PseU:0 830 chrX 57405108 57405108 1 + T G SKCM 57405108 + 57405088 57405128 41 GGTTCCCAACAAAGGTCAGTTTCCCTTGGCTGTGGGAGCCC GGTTCCCAACAAAGGTCAGTGTCCCTTGGCTGTGGGAGCCC Direct Loss 0.935466230207584 0 0.3106091 0 prediction 0.870932460415169 Functional Loss - FAAH2 ENSG00000165591 CDS Human protein_coding chrX:57405108 chrX:57405108 nonsynonymous SNV 0.267 3 21 hPsi_associated_SNPs_2789 0 0 0 0 1 nucleus 0.439097264536249 0 0 0 hPsi_site_830 iPseU_CNN:0;iRNA_PseU:0 831 chr17 39388981 39388981 1 + T C rs143261478 39388981 + 39388961 39389001 41 TGCTGCCAGCCTTCCTGCTGTAGCACACCCTGCTGCCAGCC TGCTGCCAGCCTTCCTGCTGCAGCACACCCTGCTGCCAGCC Direct Loss 0.935452912476136 0 0.44984245 0 prediction 0.870905824952272 Functional Loss - KRTAP9-3 ENSG00000204873 CDS Human protein_coding chr17:39388981 chr17:39388981 synonymous SNV . 0 21 hPsi_associated_SNPs_2790 0 0 0 0 0 unknown 0.438718576621262 0 0 0 hPsi_site_831 iPseU_CNN:0;iRNA_PseU:0 832 chr6 17130960 17130960 1 + T G UCEC 17130960 + 17130940 17130980 41 AAAGGGTGAGGTCTGCTGGATTTGAACCATCTGACCTGCAG AAAGGGTGAGGTCTGCTGGAGTTGAACCATCTGACCTGCAG Direct Loss 0.935441907697334 0 0.6350959 0 prediction 0.870883815394667 Functional Loss - STMND1 ENSG00000230873 CDS Human protein_coding chr6:17130960 chr6:17130960 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_2791 0 0 0 0 0 exosome 0.438730953588367 0 0.2701918 0 hPsi_site_832 iPseU_CNN:0.2701918;iRNA_PseU:0 833 chr9 136218167 136218167 1 + T C COAD 136218167 + 136218147 136218187 41 GGTCCTAAGTCTGTGGCTCGTATCGCCAAGCTCGAAAAGGC GGTCCTAAGTCTGTGGCTCGCATCGCCAAGCTCGAAAAGGC Direct Loss 0.935319158455917 0 0.93665713 0 prediction 0.870638316911834 Functional Loss - RPL7A ENSG00000148303 CDS Human protein_coding chr9:136218167 chr9:136218167 synonymous SNV . 0 21 hPsi_associated_SNPs_2792 0 0 1 0 1 Cytosol 0.438718410517314 0 0.87331426 0 hPsi_site_833 iPseU_CNN:0.87331426;iRNA_PseU:0 834 chr9 32634533 32634533 1 + T C BLCA 32634533 + 32634513 32634553 41 TGGTTTGGTATCTGTCACTTTATCTACATCTCCAGTTGATT TGGTTTGGTATCTGTCACTTCATCTACATCTCCAGTTGATT Direct Loss 0.935310187956384 0 0.41906786 0 prediction 0.870620375912769 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634533 chr9:32634533 nonsynonymous SNV 0.884 1 21 hPsi_associated_SNPs_2793 0 0 0 0 0 exosome 0.438718593403659 0 0 0 hPsi_site_834 iPseU_CNN:0;iRNA_PseU:0 835 chr5 118729272 118729272 1 + T G rs184886837 118729272 + 118729252 118729292 41 ATATTGCCAAAAATTCTGGTTAAAAGCTTCCTAACGGGTAA ATATTGCCAAAAATTCTGGTGAAAAGCTTCCTAACGGGTAA Direct Loss 0.935302692159493 0 0.72139275 0 prediction 0.870605384318986 Functional Loss - TNFAIP8 ENSG00000145779 UTR3 Human protein_coding chr5:118729272 chr5:118729272 . . 0 21 hPsi_associated_SNPs_2794 0 0 0 0 0 Cytosol 0.438897328080064 0 0.4427855 0 hPsi_site_835 iPseU_CNN:0.4427855;iRNA_PseU:0 836 chrX 77381288 77381288 1 + T G COAD 77381288 + 77381268 77381308 41 TGTGCTCTCTCAAAAACAGGTAAAGTCCTTCCTGGGGTGGA TGTGCTCTCTCAAAAACAGGGAAAGTCCTTCCTGGGGTGGA Direct Loss 0.935298797486421 0 0.71239257 0 prediction 0.870597594972842 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77381288 chrX:77381288 synonymous SNV . 0 21 hPsi_associated_SNPs_2795 0 0 1 0 1 Ribosome 0.438718592860273 0 0.42478514 0 hPsi_site_836 iPseU_CNN:0.42478514;iRNA_PseU:0 837 chr6 127607923 127607923 1 + T G UCEC 127607923 + 127607903 127607943 41 AGTCTGCCCTGTAAGCACGTTTTCTGCTATCTATGTGTAAA AGTCTGCCCTGTAAGCACGTGTTCTGCTATCTATGTGTAAA Direct Loss 0.935296080425554 0 0.57141495 0 prediction 0.870592160851107 Functional Loss - RNF146 ENSG00000118518 CDS Human protein_coding chr6:127607923 chr6:127607923 synonymous SNV . 0 21 hPsi_associated_SNPs_2796 0 0 1 0 0 cytosol 0.438839691759944 0 0.1428299 0 hPsi_site_837 iPseU_CNN:0.1428299;iRNA_PseU:0 838 chr16 56974081 56974081 1 + T G COAD 56974081 + 56974061 56974101 41 CAGCAGCTACATTTTCTGTTTTTCTCAGTATCCTCTACTTC CAGCAGCTACATTTTCTGTTGTTCTCAGTATCCTCTACTTC Direct Loss 0.935268547653794 0 0.57942975 0 prediction 0.870537095307588 Functional Loss - HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56974081 chr16:56974081 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2797 0 0 1 0 1 Ribosome 0.444074638041701 0 0.1588595 0 hPsi_site_838 iPseU_CNN:0.1588595;iRNA_PseU:0 839 chr7 6634125 6634125 1 + T C UCEC 6634125 + 6634105 6634145 41 CTTGTAGATGACTACTGCTGTTTGGTGCCGGGATCCATTCA CTTGTAGATGACTACTGCTGCTTGGTGCCGGGATCCATTCA Direct Loss 0.935246692829986 0 0.37006158 0 prediction 0.870493385659971 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634125 chr7:6634125 synonymous SNV . 0 21 hPsi_associated_SNPs_2798 0 0 1 0 1 chromatin 0.438718830852911 0 0 0 hPsi_site_839 iPseU_CNN:0;iRNA_PseU:0 840 chr15 75500723 75500723 1 + T G GBM 75500723 + 75500703 75500743 41 GCGTCCCTGTGTGATGCTATTTCTGGCTCCGTCGCCCACTC GCGTCCCTGTGTGATGCTATGTCTGGCTCCGTCGCCCACTC Direct Loss 0.935235782068404 0 0.6713523 0 prediction 0.870471564136807 Functional Loss - C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75500723 chr15:75500723 nonsynonymous SNV 0.990 3 21 hPsi_associated_SNPs_2799 0 0 1 0 0 Cytosol 0.41690598393119 0 0.3427046 0 hPsi_site_840 iPseU_CNN:0.3427046;iRNA_PseU:0 841 chr10 52390466 52390466 1 + T A SKCM 52390466 + 52390446 52390486 41 GGCGGCCAGGTGCTTTTGTTTTCGTTCTGCTGCAGGGATGA GGCGGCCAGGTGCTTTTGTTATCGTTCTGCTGCAGGGATGA Direct Loss 0.935217944047275 0 0.57491934 0 prediction 0.870435888094549 Functional Loss - SGMS1-AS1 ENSG00000226200;ENSG00000231588 ncRNA_exonic Human other chr10:52390466 chr10:52390466 . . 0 21 hPsi_associated_SNPs_2800 0 0 0 0 0 unknown 0.438842536967636 0 0.14983868 0 hPsi_site_841 iPseU_CNN:0.14983868;iRNA_PseU:0 842 chr19 36431696 36431696 1 + T C UCEC 36431696 + 36431676 36431716 41 CTATCCCGGGCATCCGCATGTACCAGATCCAGTACAACAGC CTATCCCGGGCATCCGCATGCACCAGATCCAGTACAACAGC Direct Loss 0.935202810210235 0 0.7754158 0 prediction 0.870405620420471 Functional Loss - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36431696 chr19:36431696 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2801 0 0 0 0 1 nucleus 0.438467690320537 0 0.5508316 0 hPsi_site_842 iPseU_CNN:0.5508316;iRNA_PseU:0 843 chr17 10614306 10614306 1 + T A HNSC 10614306 + 10614286 10614326 41 CTGAGGATCCTTTTGGTGTATACCACGTCAACCTAGAAGGA CTGAGGATCCTTTTGGTGTAAACCACGTCAACCTAGAAGGA Direct Loss 0.935198233502591 0 0.59256583 0 prediction 0.870396467005182 Functional Loss - ADPRM ENSG00000170222 CDS Human protein_coding chr17:10614306 chr17:10614306 stopgain 0.737 3 21 hPsi_associated_SNPs_2802 0 0 1 0 0 Cytosol 0.438718601136222 0 0.18513166 0 hPsi_site_843 iPseU_CNN:0.18513166;iRNA_PseU:0 844 chr7 195663 195663 1 + T C COAD 195663 + 195643 195683 41 GTATCAACCGGTACGAGCTGTACTCCAGACACAACCCGGCC GTATCAACCGGTACGAGCTGCACTCCAGACACAACCCGGCC Direct Loss 0.935189510389383 0 0.9088459 0 prediction 0.870379020778767 Functional Loss - FAM20C ENSG00000177706 CDS Human protein_coding chr7:195663 chr7:195663 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_2803 0 0 0 0 1 Ribosome 0.435679893204739 0 0.8176918 0 hPsi_site_844 iPseU_CNN:0.8176918;iRNA_PseU:0 845 chr2 68613726 68613726 1 + T A UCEC 68613726 + 68613706 68613746 41 CATCGCTGCTCAATGAGGGGTATCTGCAGCCTGCTGGAGAC CATCGCTGCTCAATGAGGGGAATCTGCAGCCTGCTGGAGAC Direct Loss 0.935145593746322 0 0.6216969 0 prediction 0.870291187492644 Functional Loss - PLEK ENSG00000115956 CDS Human protein_coding chr2:68613726 chr2:68613726 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2804 0 0 0 0 2 exosome 0.438529752353038 0 0.2433938 0 hPsi_site_845 iPseU_CNN:0.2433938;iRNA_PseU:0 846 chr16 74425836 74425836 1 + T C rs561689012 74425836 + 74425816 74425856 41 GGAGGCCGAGGCACAACAATTACCCAAACCCAAGAGGCGGA GGAGGCCGAGGCACAACAATCACCCAAACCCAAGAGGCGGA Direct Loss 0.935102058029121 0 0.69167876 0 prediction 0.870204116058243 Functional Loss - NPIPB15 ENSG00000196436 CDS Human protein_coding chr16:74425836 chr16:74425836 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_2805 0 0 0 0 0 Endoplasmic reticulum 0.438718621105524 0 0.38335752 0 hPsi_site_846 iPseU_CNN:0.38335752;iRNA_PseU:0 847 chr1 40737590 40737590 1 + T C UCEC 40737590 + 40737570 40737610 41 TTGTCACAATCTATGCTGATTATATTGCCCCTTTATTTGAC TTGTCACAATCTATGCTGATCATATTGCCCCTTTATTTGAC Direct Loss 0.935038970418687 0 0.4825406 0 prediction 0.870077940837374 Functional Loss - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40737590 chr1:40737590 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2806 0 0 0 0 1 Endoplasmic reticulum 0.439007056335717 0 0 0 hPsi_site_847 iPseU_CNN:0;iRNA_PseU:0 848 chr9 125377107 125377107 1 + T G GBM 125377107 + 125377087 125377127 41 AAATCCCACTCTTCCTTGTTTTCTCACTCATGTACGCAATC AAATCCCACTCTTCCTTGTTGTCTCACTCATGTACGCAATC Direct Loss 0.935031108586489 0 0.43630898 0 prediction 0.870062217172979 Functional Loss - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377107 chr9:125377107 nonsynonymous SNV 0.004 3 21 hPsi_associated_SNPs_2807 0 0 0 0 0 unknown 0.438806892813763 0 0 0 hPsi_site_848 iPseU_CNN:0;iRNA_PseU:0 849 chr11 59244942 59244942 1 + T G UCEC 59244942 + 59244922 59244962 41 CCAGGGTAAAAGAATTTATTTTCCTTGGCCTGACCCAGAAT CCAGGGTAAAAGAATTTATTGTCCTTGGCCTGACCCAGAAT Direct Loss 0.935002542506791 0 0.31394297 0 prediction 0.870005085013583 Functional Loss - OR4D10 ENSG00000254466 CDS Human protein_coding chr11:59244942 chr11:59244942 nonsynonymous SNV 0.142 1 21 hPsi_associated_SNPs_2808 0 0 0 0 0 unknown 0.438718590843761 0 0 0 hPsi_site_849 iPseU_CNN:0;iRNA_PseU:0 850 chr11 5510025 5510025 1 + T C rs561876125 5510025 + 5510005 5510045 41 GGAGGCTGCCCACTTCTGGATTGCCATCCCTTTCTGTGCCA GGAGGCTGCCCACTTCTGGACTGCCATCCCTTTCTGTGCCA Direct Loss 0.934987988921915 0 0.25500405 0 prediction 0.869975977843831 Functional Loss - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510025 chr11:5510025 nonsynonymous SNV 0.388 1 21 hPsi_associated_SNPs_2809 0 0 0 0 0 chromatin 0.438718459961514 0 0 0 hPsi_site_850 iPseU_CNN:0;iRNA_PseU:0 851 chr19 46021223 46021223 1 + T C LIHC 46021223 + 46021203 46021243 41 CCATCGTCCGGGGTGTCAAGTATAACCAGGCCACCCCCAAC CCATCGTCCGGGGTGTCAAGCATAACCAGGCCACCCCCAAC Direct Loss 0.934966538390835 0 0.6367378 0 prediction 0.869933076781671 Functional Loss - VASP ENSG00000125753;ENSG00000125753 exonic;splicing Human other chr19:46021223 chr19:46021223 nonsynonymous SNV 0.986 4 21 hPsi_associated_SNPs_2810 0 0 1 0 1 Ribosome 0.438718588570607 0 0.2734756 0 hPsi_site_851 iPseU_CNN:0.2734756;iRNA_PseU:0 852 chr5 180633886 180633886 1 + T A rs150638197 180633886 + 180633866 180633906 41 GTGGGGATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGT GTGGGGATGTAGCTCAGTGGAAGAGCGCATGCTTTGCATGT Direct Loss 0.934925176609215 0 0.5181753 0 prediction 0.869850353218431 Functional Loss - TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633886 chr5:180633886 . . 0 21 hPsi_associated_SNPs_2811 0 0 1 0 0 unknown 0.438693457592051 0 0.0363506 0 hPsi_site_852 iPseU_CNN:0.0363506;iRNA_PseU:0 853 chr8 39845439 39845439 1 + T A SKCM 39845439 + 39845419 39845459 41 GGGGAGAGAGCCTGCATGGTTTTATACTGGTGACTGCTTTG GGGGAGAGAGCCTGCATGGTATTATACTGGTGACTGCTTTG Direct Loss 0.934844480908429 0 0.66173685 0 prediction 0.869688961816858 Functional Loss - IDO2 ENSG00000188676 CDS Human protein_coding chr8:39845439 chr8:39845439 nonsynonymous SNV 0.944 5 21 hPsi_associated_SNPs_2812 0 0 0 3 2 exosome 0.441509747715816 0 0.3234737 0 hPsi_site_853 iPseU_CNN:0.3234737;iRNA_PseU:0 854 chr10 99509290 99509290 1 + T C UCEC 99509290 + 99509270 99509310 41 TTTGCTGCCACTCTGCTGGGTTCTCACCCTTTTAAACAGCA TTTGCTGCCACTCTGCTGGGCTCTCACCCTTTTAAACAGCA Direct Loss 0.934821349632154 0 0.7208345 0 prediction 0.869642699264309 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99509290 chr10:99509290 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_2813 0 0 1 0 2 Ribosome 0.438719926858255 0 0.441669 0 hPsi_site_854 iPseU_CNN:0.441669;iRNA_PseU:0 855 chr12 49743247 49743247 1 + T A LUSC 49743247 + 49743227 49743267 41 CTTTCACAGGCCCACTGGCATACAGTGCCCTCTGCAACACA CTTTCACAGGCCCACTGGCAAACAGTGCCCTCTGCAACACA Direct Loss 0.934770393159396 0 0.6888843 0 prediction 0.869540786318792 Functional Loss - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49743247 chr12:49743247 nonsynonymous SNV 0.662 2 21 hPsi_associated_SNPs_2814 0 0 0 0 0 Ribosome 0.439063944712042 0 0.3777686 0 hPsi_site_855 iPseU_CNN:0.3777686;iRNA_PseU:0 856 chr15 90808954 90808954 1 + A G STAD 90808954 - 90808934 90808974 41 GCCCAGCAAGAGACTCAGGGTAACCGCCATGTCGACGCAAA GCCCAGCAAGAGACTCAGGGCAACCGCCATGTCGACGCAAA Direct Loss 0.934735448532656 0 0.3119646 0 prediction 0.869470897065312 Functional Loss - NGRN ENSG00000182768 CDS Human protein_coding chr15:90808954 chr15:90808954 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_2815 0 0 0 0 1 Ribosome 0.438719625757012 0 0 0 hPsi_site_856 iPseU_CNN:0;iRNA_PseU:0 857 chr8 90926879 90926879 1 + T C rs35542900 90926879 + 90926859 90926899 41 ATCCAGATGCTGACTTTGGGTATGATTATCCATCCGTTTTG ATCCAGATGCTGACTTTGGGCATGATTATCCATCCGTTTTG Direct Loss 0.934734177405659 0 0.40275335 0 prediction 0.869468354811318 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90926879 chr8:90926879 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_2816 0 0 1 0 2 Cytosol 0.438719376048378 0 0 0 hPsi_site_857 iPseU_CNN:0;iRNA_PseU:0 858 chr17 34173956 34173956 1 + T C CESC 34173956 + 34173936 34173976 41 ACCGACCATACTGATGACTGTTTTGAATGTTCCTTTGTCTC ACCGACCATACTGATGACTGCTTTGAATGTTCCTTTGTCTC Direct Loss 0.934673929529474 0 0.42666826 0 prediction 0.869347859058949 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34173956 chr17:34173956 synonymous SNV . 0 21 hPsi_associated_SNPs_2817 0 0 1 7 1 Cytosol 0.438322897209442 0 0 0 hPsi_site_858 iPseU_CNN:0;iRNA_PseU:0 859 chr16 14973918 14973918 1 + T G COAD 14973918 + 14973898 14973938 41 CATGATGAAGGAGTTCCGGTTTGAGCCATCCTCACAGATGA CATGATGAAGGAGTTCCGGTGTGAGCCATCCTCACAGATGA Direct Loss 0.934646209133643 0 0.8759486 0 prediction 0.869292418267286 Functional Loss - NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14973918 chr16:14973918 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_2818 0 0 1 0 2 Nucleus 0.438697595391206 0 0.7518972 0 hPsi_site_859 iPseU_CNN:0.7518972;iRNA_PseU:0 860 chr3 97806797 97806797 1 + T A LUSC 97806797 + 97806777 97806817 41 ACGGAACTCTGATCTTCATGTATGTGCGTCCTGCATCTGGC ACGGAACTCTGATCTTCATGAATGTGCGTCCTGCATCTGGC Direct Loss 0.934606378076263 0 0.5550631 0 prediction 0.869212756152526 Functional Loss - OR5AC2 ENSG00000196578 CDS Human protein_coding chr3:97806797 chr3:97806797 nonsynonymous SNV 0.571 3 21 hPsi_associated_SNPs_2819 0 0 0 0 0 unknown 0.44131445810858 0 0.1101262 0 hPsi_site_860 iPseU_CNN:0.1101262;iRNA_PseU:0 861 chr1 67243080 67243080 1 + T G UCEC 67243080 + 67243060 67243100 41 GATACCTTTTCATCTTATGTTTTCAGAAATTCTTCTCTCTT GATACCTTTTCATCTTATGTGTTCAGAAATTCTTCTCTCTT Direct Loss 0.934599748930958 0 0.41252494 0 prediction 0.869199497861917 Functional Loss - TCTEX1D1 ENSG00000152760 CDS Human protein_coding chr1:67243080 chr1:67243080 synonymous SNV . 0 21 hPsi_associated_SNPs_2820 0 0 0 1 0 exosome 0.438718551424848 0 0 0 hPsi_site_861 iPseU_CNN:0;iRNA_PseU:0 862 chr17 33288718 33288718 1 + T C UCEC 33288718 + 33288698 33288738 41 TAGAATCTCCATTCGCGAAGTACAACCGTTTGGGGCAGCTG TAGAATCTCCATTCGCGAAGCACAACCGTTTGGGGCAGCTG Direct Loss 0.934593808145733 0 0.34868854 0 prediction 0.869187616291466 Functional Loss - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33288718 chr17:33288718 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2821 0 0 1 0 0 Cytosol 0.438730640494003 0 0 0 hPsi_site_862 iPseU_CNN:0;iRNA_PseU:0 863 chr9 140135776 140135776 1 + T A rs368345353 140135776 + 140135756 140135796 41 CTCTTCTGCTGCTGTTTGTCTACTTCCTCCTGCTTCCCCGC CTCTTCTGCTGCTGTTTGTCAACTTCCTCCTGCTTCCCCGC Direct Loss 0.934575202464381 0 0.71755046 0 prediction 0.869150404928761 Functional Loss - TUBB4B ENSG00000188229 UTR5 Human protein_coding chr9:140135776 chr9:140135776 . . 0 21 hPsi_associated_SNPs_2822 0 0 1 0 1 Cytosol 0.438616664196931 0 0.43510092 0 hPsi_site_863 iPseU_CNN:0.43510092;iRNA_PseU:0 864 chr9 131584720 131584720 1 + T C rs146032272 131584720 + 131584700 131584740 41 GGAGGCAGCAGGTGGGCAAATTGAGCTCCGCACCTACGTGA GGAGGCAGCAGGTGGGCAAACTGAGCTCCGCACCTACGTGA Direct Loss 0.934553617602549 0 0.4930626 0 prediction 0.869107235205098 Functional Loss - ENDOG ENSG00000167136 CDS Human protein_coding chr9:131584720 chr9:131584720 nonsynonymous SNV 0.269 1 21 hPsi_associated_SNPs_2823 0 0 1 0 0 Cytosol 0.438718504281059 0 0 0 hPsi_site_864 iPseU_CNN:0;iRNA_PseU:0 865 chr2 24387156 24387156 1 + T C UCEC 24387156 + 24387136 24387176 41 AAGAGGCCATCTCTGAAGGGTATTTTTCTTCCTTGAGCCTC AAGAGGCCATCTCTGAAGGGCATTTTTCTTCCTTGAGCCTC Direct Loss 0.934516828920897 0 0.6665995 0 prediction 0.869033657841794 Functional Loss - FAM228B ENSG00000219626;ENSG00000266118 CDS Human other chr2:24387156 chr2:24387156 nonsynonymous SNV 0.014 0 21 hPsi_associated_SNPs_2824 0 0 0 0 2 Nucleus 0.43871859683063 0 0.333199 0 hPsi_site_865 iPseU_CNN:0.333199;iRNA_PseU:0 866 chr6 27791932 27791932 1 + T C rs549537157 27791932 + 27791912 27791952 41 CGCGGCAAAGGCGGGAAGGGTCTTGGCAAAGGCGGCGCTAA CGCGGCAAAGGCGGGAAGGGCCTTGGCAAAGGCGGCGCTAA Direct Loss 0.9345021442645 0 0.31052458 0 prediction 0.869004288529 Functional Loss - HIST1H4J ENSG00000197238 CDS Human protein_coding chr6:27791932 chr6:27791932 synonymous SNV . 0 21 hPsi_associated_SNPs_2825 0 0 0 0 0 Ribosome 0.438718587035655 0 0 0 hPsi_site_866 iPseU_CNN:0;iRNA_PseU:0 867 chr1 171761292 171761292 1 + T C UCEC 171761292 + 171761272 171761312 41 GGAAGTGGCCACCCAGTGGTTTGGCTTCTCCCAGAGTGACC GGAAGTGGCCACCCAGTGGTCTGGCTTCTCCCAGAGTGACC Direct Loss 0.934437359321657 0 0.66333216 0 prediction 0.868874718643314 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171761292 chr1:171761292 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2826 0 0 1 0 1 Ribosome 0.438718584851715 0 0.32666432 0 hPsi_site_867 iPseU_CNN:0.32666432;iRNA_PseU:0 868 chr7 139102335 139102335 1 + A C rs118183173 139102335 - 139102315 139102355 41 GATCGAGTTCTCCTCTTGCGTTCACGTGACATGGAGCGAGA GATCGAGTTCTCCTCTTGCGGTCACGTGACATGGAGCGAGA Direct Loss 0.934417371991381 0 0.21282482 0 prediction 0.868834743982761 Functional Loss - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139102335 chr7:139102335 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_2827 0 0 0 0 0 unknown 0.437679688407946 0 0 0 hPsi_site_868 iPseU_CNN:0;iRNA_PseU:0 869 chr1 166594062 166594062 1 + T C UCEC 166594062 + 166594042 166594082 41 ATTTGAAGAGGGATTCTGGTTACGTTCAGTTAAGCAGGACA ATTTGAAGAGGGATTCTGGTCACGTTCAGTTAAGCAGGACA Direct Loss 0.934382867514861 0 0.9210101 0 prediction 0.868765735029722 Functional Loss - FMO9P ENSG00000215834 ncRNA_exonic Human transcribed_unitary_pseudogene chr1:166594062 chr1:166594062 . . 0 21 hPsi_associated_SNPs_2828 0 0 0 0 0 unknown 0.438743843021244 0 0.8420202 0 hPsi_site_869 iPseU_CNN:0.8420202;iRNA_PseU:0 870 chr8 94934399 94934399 1 + T C PRAD 94934399 + 94934379 94934419 41 ATCTCTGTTGTTCCTCATCGTACATTCCTCAGAGTCGACTG ATCTCTGTTGTTCCTCATCGCACATTCCTCAGAGTCGACTG Direct Loss 0.934367999706439 0 0.6809301 0 prediction 0.868735999412878 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94934399 chr8:94934399 nonsynonymous SNV 0.129 0 21 hPsi_associated_SNPs_2829 0 0 0 0 0 Ribosome 0.438632106577621 0 0.3618602 0 hPsi_site_870 iPseU_CNN:0.3618602;iRNA_PseU:0 871 chr7 54612428 54612428 1 + T C UCEC 54612428 + 54612408 54612448 41 ATCTGGAGATCCAATGGTGGTTCCTGCGGGGGCCGGAGGAC ATCTGGAGATCCAATGGTGGCTCCTGCGGGGGCCGGAGGAC Direct Loss 0.93433252260609 0 0.47863394 0 prediction 0.868665045212179 Functional Loss - VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54612428 chr7:54612428 nonsynonymous SNV 0.993 1 21 hPsi_associated_SNPs_2830 0 0 0 0 1 exosome 0.43871859291318 0 0 0 hPsi_site_871 iPseU_CNN:0;iRNA_PseU:0 872 chr8 53853136 53853136 1 + T C LUAD 53853136 + 53853116 53853156 41 TCCACCATCTGTGTCCTCTATACCACCCTGCTGTGCCGGCT TCCACCATCTGTGTCCTCTACACCACCCTGCTGTGCCGGCT Direct Loss 0.934322827824827 0 0.68676805 0 prediction 0.868645655649655 Functional Loss - NPBWR1 ENSG00000183729 CDS Human protein_coding chr8:53853136 chr8:53853136 synonymous SNV . 0 21 hPsi_associated_SNPs_2831 0 0 0 0 0 exosome 0.438718593822426 0 0.3735361 0 hPsi_site_872 iPseU_CNN:0.3735361;iRNA_PseU:0 873 chr2 237490078 237490078 1 + T C LUAD 237490078 + 237490058 237490098 41 TCATCAATCGCAACTACAGGTACGAGCTGATGAAGGCCTTC TCATCAATCGCAACTACAGGCACGAGCTGATGAAGGCCTTC Direct Loss 0.93425051716322 0 0.7058807 0 prediction 0.86850103432644 Functional Loss - ACKR3 ENSG00000144476 CDS Human protein_coding chr2:237490078 chr2:237490078 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_2832 0 0 1 0 0 Nucleus 0.438746531011088 0 0.4117614 0 hPsi_site_873 iPseU_CNN:0.4117614;iRNA_PseU:0 874 chr19 6362538 6362538 1 + T A UCEC 6362538 + 6362518 6362558 41 ACAAGAAGCCCATCCACATGTACATCAACAGCCCTGGTGAG ACAAGAAGCCCATCCACATGAACATCAACAGCCCTGGTGAG Direct Loss 0.934158935176059 0 0.54446495 0 prediction 0.868317870352119 Functional Loss - CLPP ENSG00000125656;ENSG00000125656 exonic;splicing Human other chr19:6362538 chr19:6362538 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2833 0 0 1 0 2 Cytosol 0.438720159626388 0 0.0889298999999999 0 hPsi_site_874 iPseU_CNN:0.0889298999999999;iRNA_PseU:0 875 chr14 21966439 21966439 1 + T C COAD 21966439 + 21966419 21966459 41 TAGAGATGATACCATCTGGGTACCTTTGCTTGAACCGTGCA TAGAGATGATACCATCTGGGCACCTTTGCTTGAACCGTGCA Direct Loss 0.934140041647936 0 0.70190716 0 prediction 0.868280083295873 Functional Loss - METTL3 ENSG00000165819 CDS Human protein_coding chr14:21966439 chr14:21966439 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2834 0 0 1 0 0 Nucleus 0.438750081450155 0 0.40381432 0 hPsi_site_875 iPseU_CNN:0.40381432;iRNA_PseU:0 876 chr22 50654274 50654274 1 + T C HNSC 50654274 + 50654254 50654294 41 TGGAGGAGCTGAGGCTGGCCTTCCGGCCCCAGATGGATCCC TGGAGGAGCTGAGGCTGGCCCTCCGGCCCCAGATGGATCCC Direct Loss 0.934139038446569 0 0.5994317 0 prediction 0.868278076893137 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50654274 chr22:50654274 unknown 0.869 0 21 hPsi_associated_SNPs_2835 0 0 0 0 1 Nucleus 0.438680215651397 0 0.1988634 0 hPsi_site_876 iPseU_CNN:0.1988634;iRNA_PseU:0 877 chr1 227935675 227935675 1 + T C UCEC 227935675 + 227935655 227935695 41 AGGGCCATGCCAAGCACTGGTTCAGCTCCCTGCGGCCAAGT AGGGCCATGCCAAGCACTGGCTCAGCTCCCTGCGGCCAAGT Direct Loss 0.9341055941019 0 0.57086843 0 prediction 0.868211188203801 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227935675 chr1:227935675 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2836 0 0 1 0 0 Ribosome 0.438718592995102 0 0.14173686 0 hPsi_site_877 iPseU_CNN:0.14173686;iRNA_PseU:0 878 chr6 50682985 50682985 1 + T C LUSC 50682985 + 50682965 50683005 41 ACTTCTCCACTAACCACCAGTACACCCCGCTCCACCACCAG ACTTCTCCACTAACCACCAGCACACCCCGCTCCACCACCAG Direct Loss 0.933949033094223 0 0.52799445 0 prediction 0.867898066188447 Functional Loss - TFAP2D ENSG00000008197 CDS Human protein_coding chr6:50682985 chr6:50682985 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2837 0 0 0 0 0 unknown 0.438714778755759 0 0.0559889 0 hPsi_site_878 iPseU_CNN:0.0559889;iRNA_PseU:0 879 chr10 69948844 69948844 1 + T C rs10733838 69948844 + 69948824 69948864 41 GTCACAGAAGGCTCTCCAGTTACATTCACCTGCAAAATTGT GTCACAGAAGGCTCTCCAGTCACATTCACCTGCAAAATTGT Direct Loss 0.933905231144239 0 0.9172722 0 prediction 0.867810462288478 Functional Loss - MYPN ENSG00000138347 CDS Human protein_coding chr10:69948844 chr10:69948844 synonymous SNV . 0 21 hPsi_associated_SNPs_2838 4 0 1 1 1 Cytosol 0.437455212466981 0 0.8345444 0 hPsi_site_879 iPseU_CNN:0.8345444;iRNA_PseU:0 880 chr17 900433 900433 1 + T C STAD 900433 + 900413 900453 41 TCGGCCCCTGAGACAGCGGGTTCCGCCGAAGCTCCGCTGCA TCGGCCCCTGAGACAGCGGGCTCCGCCGAAGCTCCGCTGCA Direct Loss 0.933881871188495 0 0.7205578 0 prediction 0.867763742376991 Functional Loss - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900433 chr17:900433 synonymous SNV . 0 21 hPsi_associated_SNPs_2839 0 0 1 0 0 Cytosol 0.438718591548714 0 0.4411156 0 hPsi_site_880 iPseU_CNN:0.4411156;iRNA_PseU:0 881 chr1 95710178 95710178 1 + T C COAD 95710178 + 95710158 95710198 41 GGAGAAGTGGGCTTCAGATTTAAGGCTGACAGGAAGACTGA GGAGAAGTGGGCTTCAGATTCAAGGCTGACAGGAAGACTGA Direct Loss 0.933859579856788 0 0.22538877 0 prediction 0.867719159713575 Functional Loss - RWDD3 ENSG00000122481 CDS Human protein_coding chr1:95710178 chr1:95710178 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2840 0 0 1 0 4 Cytosol 0.438718592995102 0 0 0 hPsi_site_881 iPseU_CNN:0;iRNA_PseU:0 882 chr1 28863288 28863288 1 + T G OV 28863288 + 28863268 28863308 41 ACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCTTGGA ACAGCCTGGGCCGGGCTGAGGATGGGCGGCTGGGCCTTGGA Direct Loss 0.933848774791536 0 0.34817666 0 prediction 0.867697549583072 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28863288 chr1:28863288 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_2841 0 0 1 0 1 Ribosome 0.438718592990899 0 0 0 hPsi_site_882 iPseU_CNN:0;iRNA_PseU:0 883 chr16 28847651 28847651 1 + T C COAD 28847651 + 28847631 28847671 41 GCACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAG GCACCTGTCTGTGAAGTATGCAGGGTGGGCAGAAGCCACAG Direct Loss 0.933815698594028 0 0.67461693 0 prediction 0.867631397188055 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847651 chr16:28847651 synonymous SNV . 0 21 hPsi_associated_SNPs_2842 0 0 1 0 1 Cytosol 0.438710738270702 0 0.34923386 0 hPsi_site_883 iPseU_CNN:0.34923386;iRNA_PseU:0 884 chr16 29847049 29847049 1 + T C UCEC 29847049 + 29847029 29847069 41 AGAATGGCTGGTCACCACAGTAGGGGCGTACCTCCCAGCGG AGAATGGCTGGTCACCACAGCAGGGGCGTACCTCCCAGCGG Direct Loss 0.933805106996281 0 0.86612153 0 prediction 0.867610213992562 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29847049 chr16:29847049 nonsynonymous SNV 0.470 2 21 hPsi_associated_SNPs_2843 0 0 0 0 2 Nucleus 0.438696905472233 0 0.73224306 0 hPsi_site_884 iPseU_CNN:0.73224306;iRNA_PseU:0 885 chrX 78010723 78010723 1 + T C UCEC 78010723 + 78010703 78010743 41 ATCTCTGGAACTGCATTCCTTACCAACATCTATGGGAGCAT ATCTCTGGAACTGCATTCCTCACCAACATCTATGGGAGCAT Direct Loss 0.93369601006513 0 0.37445074 0 prediction 0.867392020130261 Functional Loss - LPAR4 ENSG00000147145 CDS Human protein_coding chrX:78010723 chrX:78010723 synonymous SNV . 0 21 hPsi_associated_SNPs_2844 0 0 0 0 0 exosome 0.437403964525134 0 0 0 hPsi_site_885 iPseU_CNN:0;iRNA_PseU:0 886 chr11 67378542 67378542 1 + T C rs148303496 67378542 + 67378522 67378562 41 ACAATCTGCCGCCGTGGAGGTACCTGGTTTGCTGGCTTTGG ACAATCTGCCGCCGTGGAGGCACCTGGTTTGCTGGCTTTGG Direct Loss 0.933678821227426 0 0.7764 0 prediction 0.867357642454852 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378542 chr11:67378542 synonymous SNV . 0 21 hPsi_associated_SNPs_2845 0 0 1 0 1 Ribosome 0.438718592995944 0 0.5528 0 hPsi_site_886 iPseU_CNN:0.5528;iRNA_PseU:0 887 chr16 57181683 57181683 1 + T A rs560996839 57181683 + 57181663 57181703 41 TTTACCGATCCCCTTTTTTATTTTTTACAACCGGACCTCCA TTTACCGATCCCCTTTTTTAATTTTTACAACCGGACCTCCA Direct Loss 0.933636703020197 0 0.2992382 0 prediction 0.867273406040393 Functional Loss - CPNE2 ENSG00000140848 UTR3 Human protein_coding chr16:57181683 chr16:57181683 . . 0 21 hPsi_associated_SNPs_2846 0 0 1 0 0 chromatin 0.438718592995102 0 0 0 hPsi_site_887 iPseU_CNN:0;iRNA_PseU:0 888 chr13 33590851 33590851 1 + T C rs2772364 33590851 + 33590831 33590871 41 AAGGGTGCGTCCATCTGGGATACGTTCACCCACCACCCCCT AAGGGTGCGTCCATCTGGGACACGTTCACCCACCACCCCCT Direct Loss 0.933635445690613 0 0.903012 0 prediction 0.867270891381226 Functional Loss - KL ENSG00000133116 CDS Human protein_coding chr13:33590851 chr13:33590851 synonymous SNV . 0 21 hPsi_associated_SNPs_2847 1 0 0 0 0 exosome 0.438717382737443 0 0.806024 0 hPsi_site_888 iPseU_CNN:0.806024;iRNA_PseU:0 889 chr12 54369263 54369263 1 + T C UCEC 54369263 + 54369243 54369283 41 TTTATTTTATTTTTATTTTTTATTTTCTAACTCGTCTTCTT TTTATTTTATTTTTATTTTTCATTTTCTAACTCGTCTTCTT Direct Loss 0.933577778670828 0 0.37077072 0 prediction 0.867155557341655 Functional Loss - HOXC11 ENSG00000123388 CDS Human protein_coding chr12:54369263 chr12:54369263 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_2848 0 0 1 1 0 exosome 0.438718612088242 0 0 0 hPsi_site_889 iPseU_CNN:0;iRNA_PseU:0 890 chr1 15894641 15894641 1 + T G UCEC 15894641 + 15894621 15894661 41 GGAGGGCTCCTTACAGAGGTTTTATATCCCATCATGGCCTG GGAGGGCTCCTTACAGAGGTGTTATATCCCATCATGGCCTG Direct Loss 0.933551653036881 0 0.6345531 0 prediction 0.867103306073761 Functional Loss - DNAJC16 ENSG00000116138 CDS Human protein_coding chr1:15894641 chr1:15894641 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2849 0 0 1 1 1 Endoplasmic reticulum 0.438718592994632 0 0.2691062 0 hPsi_site_890 iPseU_CNN:0.2691062;iRNA_PseU:0 891 chr6 31496822 31496822 1 + T C COAD 31496822 + 31496802 31496842 41 CTCTGCCCTGGCTCTCTCGGTACCATTTCCTTCGCCTCCTT CTCTGCCCTGGCTCTCTCGGCACCATTTCCTTCGCCTCCTT Direct Loss 0.93353601415416 0 0.78290504 0 prediction 0.867072028308321 Functional Loss - MCCD1 ENSG00000204511 CDS Human protein_coding chr6:31496822 chr6:31496822 nonsynonymous SNV 0.023 1 21 hPsi_associated_SNPs_2850 0 0 0 0 0 exosome 0.440005497698425 0 0.56581008 0 hPsi_site_891 iPseU_CNN:0.56581008;iRNA_PseU:0 892 chr7 100485401 100485401 1 + T C UCEC 100485401 + 100485381 100485421 41 GTGAAAAAGGAAGTCGCGTTTTTTAACAACTTCCTCACTGA GTGAAAAAGGAAGTCGCGTTCTTTAACAACTTCCTCACTGA Direct Loss 0.933528784513598 0 0.33135748 0 prediction 0.867057569027196 Functional Loss - SRRT ENSG00000087087 CDS Human protein_coding chr7:100485401 chr7:100485401 synonymous SNV . 0 21 hPsi_associated_SNPs_2851 0 0 1 0 0 Nucleus 0.438718593022158 0 0 0 hPsi_site_892 iPseU_CNN:0;iRNA_PseU:0 893 chr2 233406231 233406231 1 + T A LUSC 233406231 + 233406211 233406251 41 GACTGGCAGAACTGCTCCCTTATCTTCCAGTGAGGCCATTT GACTGGCAGAACTGCTCCCTAATCTTCCAGTGAGGCCATTT Direct Loss 0.933491170594422 0 0.35576528 0 prediction 0.866982341188843 Functional Loss - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233406231 chr2:233406231 synonymous SNV . 0 21 hPsi_associated_SNPs_2852 0 0 0 0 1 chromatin 0.438705507823793 0 0 0 hPsi_site_893 iPseU_CNN:0;iRNA_PseU:0 894 chr11 18158991 18158991 1 + T C LUAD 18158991 + 18158971 18159011 41 CTTCCTTAGCGGCCACATTATATGTTCGCCGTTACGCCTCA CTTCCTTAGCGGCCACATTACATGTTCGCCGTTACGCCTCA Direct Loss 0.933460297571749 0 0.30230105 0 prediction 0.866920595143499 Functional Loss - MRGPRX3 ENSG00000179826 CDS Human protein_coding chr11:18158991 chr11:18158991 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_2853 0 0 0 0 0 exosome 0.438809431079087 0 0 0 hPsi_site_894 iPseU_CNN:0;iRNA_PseU:0 895 chr4 83378122 83378122 1 + T C UCEC 83378122 + 83378102 83378142 41 ACAAAGTAGAGAGTGAAAGTTACCGAAAGATTGCAGACAGC ACAAAGTAGAGAGTGAAAGTCACCGAAAGATTGCAGACAGC Direct Loss 0.933422652045954 0 0.68797785 0 prediction 0.866845304091907 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83378122 chr4:83378122 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_2854 0 0 1 0 2 Ribosome 0.438625143669878 0 0.3759557 0 hPsi_site_895 iPseU_CNN:0.3759557;iRNA_PseU:0 896 chr16 21416164 21416164 1 + T G UCEC 21416164 + 21416144 21416184 41 CTCGGCACGTGTCTTGAGATTATCATCCGCTGAGGGTGGAG CTCGGCACGTGTCTTGAGATGATCATCCGCTGAGGGTGGAG Direct Loss 0.933420941513007 0 0.68970454 0 prediction 0.866841883026015 Functional Loss - NPIPB3 ENSG00000169246 CDS Human protein_coding chr16:21416164 chr16:21416164 nonsynonymous SNV 0.001 2 21 hPsi_associated_SNPs_2855 0 0 0 1 0 Cytosol 0.438570683339249 0 0.37940908 0 hPsi_site_896 iPseU_CNN:0.37940908;iRNA_PseU:0 897 chr2 133402945 133402945 1 + A G UCEC 133402945 - 133402925 133402965 41 TCGGTGGTGGAGTGCGCATGTACGCGCAGGCGCTTCTCGTG TCGGTGGTGGAGTGCGCATGCACGCGCAGGCGCTTCTCGTG Direct Loss 0.933389087272675 0 0.5131755 0 prediction 0.86677817454535 Functional Loss - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402945 chr2:133402945 synonymous SNV . 0 21 hPsi_associated_SNPs_2856 0 0 1 0 0 nucleus 0.438642874663798 0 0.026351 0 hPsi_site_897 iPseU_CNN:0.026351;iRNA_PseU:0 898 chr8 48101793 48101793 1 + T G rs6990363 48101793 + 48101773 48101813 41 AGTGGGGCCTCTCCTTATTTTTGCATTGGTCTCTGTGCCAC AGTGGGGCCTCTCCTTATTTGTGCATTGGTCTCTGTGCCAC Direct Loss 0.933381047651624 0 0.37761247 0 prediction 0.866762095303248 Functional Loss - LOC100287846 ENSG00000248347 ncRNA_intronic Human unprocessed_pseudogene chr8:48101793 chr8:48101793 . . 0 21 hPsi_associated_SNPs_2857 0 0 0 0 0 unknown 0.438718905451949 0 0 0 hPsi_site_898 iPseU_CNN:0;iRNA_PseU:0 899 chr6 153075349 153075349 1 + T A SKCM 153075349 + 153075329 153075369 41 GCAAATGAACCTGATCAAGTTTCATTAAAAGAAGACATTGA GCAAATGAACCTGATCAAGTATCATTAAAAGAAGACATTGA Direct Loss 0.933380710325144 0 0.37747252 0 prediction 0.866761420650288 Functional Loss - VIP ENSG00000146469 CDS Human protein_coding chr6:153075349 chr6:153075349 synonymous SNV . 0 21 hPsi_associated_SNPs_2858 0 0 0 0 2 exosome 0.439384487196902 0 0 0 hPsi_site_899 iPseU_CNN:0;iRNA_PseU:0 900 chr17 18834021 18834021 1 + T C rs1801755 18834021 + 18834001 18834041 41 TAGATGACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCA TAGATGACTGAGTTTTCCTTCAGGAAAACTCCCGAGGGCCA Direct Loss 0.93333200764158 0 0.3226369 0 prediction 0.86666401528316 Functional Loss - PRPSAP2 ENSG00000141127 UTR3 Human protein_coding chr17:18834021 chr17:18834021 . . 0 21 hPsi_associated_SNPs_2859 0 0 1 1 0 Ribosome 0.438718653489592 0 0 0 hPsi_site_900 iPseU_CNN:0;iRNA_PseU:0 901 chr13 25671937 25671937 1 + T A SARC 25671937 + 25671917 25671957 41 GCAACAGCTTGCTGTTCATGTACAAGGTCAGGAAACTTTGA GCAACAGCTTGCTGTTCATGAACAAGGTCAGGAAACTTTGA Direct Loss 0.933312851922788 0 0.33812034 0 prediction 0.866625703845577 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671937 chr13:25671937 nonsynonymous SNV 0.028 0 21 hPsi_associated_SNPs_2860 0 0 0 0 0 Cytosol 0.438959991690935 0 0 0 hPsi_site_901 iPseU_CNN:0;iRNA_PseU:0 902 chr22 50355246 50355246 1 + T G COAD 50355246 + 50355226 50355266 41 CGGCGCAGGACCTCTTCGACTTTATCACGGAGCGCGGCGCC CGGCGCAGGACCTCTTCGACGTTATCACGGAGCGCGGCGCC Direct Loss 0.93326696108509 0 0.94484663 0 prediction 0.86653392217018 Functional Loss - PIM3 ENSG00000198355 CDS Human protein_coding chr22:50355246 chr22:50355246 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_2861 0 0 1 0 0 Ribosome 0.438707617807803 0 0.88969326 0 hPsi_site_902 iPseU_CNN:0.88969326;iRNA_PseU:0 903 chr8 143784596 143784596 1 + T G COAD 143784596 + 143784576 143784616 41 CAAGCCAGAGGAGAAGCGGTTTCTCCTGGAAGAGCCCATGC CAAGCCAGAGGAGAAGCGGTGTCTCCTGGAAGAGCCCATGC Direct Loss 0.933256645225238 0 0.67870635 0 prediction 0.866513290450477 Functional Loss - LY6K ENSG00000160886 CDS Human protein_coding chr8:143784596 chr8:143784596 nonsynonymous SNV 0.007 3 21 hPsi_associated_SNPs_2862 0 0 0 0 2 nucleus 0.438718591811618 0 0.3574127 0 hPsi_site_903 iPseU_CNN:0.3574127;iRNA_PseU:0 904 chr3 9506285 9506285 1 + T C rs117354149 9506285 + 9506265 9506305 41 AAGAGGAGTGTCGAAATGGATACAGCCTCATGTTTTCACCA AAGAGGAGTGTCGAAATGGACACAGCCTCATGTTTTCACCA Direct Loss 0.933247291891157 0 0.7214043 0 prediction 0.866494583782315 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9506285 chr3:9506285 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_2863 0 0 1 0 1 Nucleus 0.438688171173486 0 0.4428086 0 hPsi_site_904 iPseU_CNN:0.4428086;iRNA_PseU:0 905 chr7 44150385 44150385 1 + T C STAD 44150385 + 44150365 44150405 41 ACAGCCAGACATGGGTGATGTACACCAACGGCTATGAGGAA ACAGCCAGACATGGGTGATGCACACCAACGGCTATGAGGAA Direct Loss 0.933246240925532 0 0.376835 0 prediction 0.866492481851064 Functional Loss - AEBP1 ENSG00000106624 CDS Human protein_coding chr7:44150385 chr7:44150385 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2864 0 0 0 0 2 Endoplasmic reticulum 0.433104836907495 0 0 0 hPsi_site_905 iPseU_CNN:0;iRNA_PseU:0 906 chr12 49666727 49666727 1 + A G LUAD 49666727 - 49666707 49666747 41 CCACAGTGGGAGGCTGGTAATTAATGCCAACCTTGAAGCCA CCACAGTGGGAGGCTGGTAACTAATGCCAACCTTGAAGCCA Direct Loss 0.933218944434522 0 0.3721581 0 prediction 0.866437888869045 Functional Loss - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666727 chr12:49666727 nonsynonymous SNV 0.994 5 21 hPsi_associated_SNPs_2865 0 0 0 0 0 Cytosol 0.43835296118362 0 0 0 hPsi_site_906 iPseU_CNN:0;iRNA_PseU:0 907 chr1 22333988 22333988 1 + T C rs112024506 22333988 + 22333968 22334008 41 CCATGGTGTGTGCTGGAGGGTACATCCGCTCCGGCTGCAAC CCATGGTGTGTGCTGGAGGGCACATCCGCTCCGGCTGCAAC Direct Loss 0.93319712932902 0 0.9166534 0 prediction 0.86639425865804 Functional Loss - CELA3A ENSG00000142789 CDS Human protein_coding chr1:22333988 chr1:22333988 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_2866 0 0 0 0 1 Endoplasmic reticulum 0.438714236920185 0 0.8333068 0 hPsi_site_907 iPseU_CNN:0.8333068;iRNA_PseU:0 908 chr10 93751928 93751928 1 + T C GBM 93751928 + 93751908 93751948 41 ACTGTCACCAAGCACAGAGGTATAATTACACTCTACAGGCA ACTGTCACCAAGCACAGAGGCATAATTACACTCTACAGGCA Direct Loss 0.933195366909794 0 0.74715436 0 prediction 0.866390733819588 Functional Loss - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93751928 chr10:93751928 synonymous SNV . 0 21 hPsi_associated_SNPs_2867 0 0 1 0 1 Nucleus 0.43873114947292 0 0.49430872 0 hPsi_site_908 iPseU_CNN:0.49430872;iRNA_PseU:0 909 chr19 44610774 44610774 1 + A G UCEC 44610774 - 44610754 44610794 41 AGACATCACTGAAGGATGGTTTATATCCATTGCCCTGGGAA AGACATCACTGAAGGATGGTCTATATCCATTGCCCTGGGAA Direct Loss 0.933172451610886 0 0.81755495 0 prediction 0.866344903221772 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44610774 chr19:44610774 nonsynonymous SNV 0.007 1 21 hPsi_associated_SNPs_2868 0 0 1 0 0 nucleus 0.437114500758474 0 0.6351099 0 hPsi_site_909 iPseU_CNN:0.6351099;iRNA_PseU:0 910 chr5 140517122 140517122 1 + T C COAD 140517122 + 140517102 140517142 41 GTGTCGTCGCTCTTCCTCTTTTCGGTGCTCCTGTTCGTGGC GTGTCGTCGCTCTTCCTCTTCTCGGTGCTCCTGTTCGTGGC Direct Loss 0.933156629094092 0 0.8856822 0 prediction 0.866313258188184 Functional Loss - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140517122 chr5:140517122 synonymous SNV . 0 21 hPsi_associated_SNPs_2869 0 0 0 0 0 Endoplasmic reticulum 0.438718550305435 0 0.7713644 0 hPsi_site_910 iPseU_CNN:0.7713644;iRNA_PseU:0 911 chr11 93494790 93494790 1 + T C STAD 93494790 + 93494770 93494810 41 GGAATATCTTGGATACTTCTTACCTGCAGAGTTTCTCTATC GGAATATCTTGGATACTTCTCACCTGCAGAGTTTCTCTATC Direct Loss 0.933137781350569 0 0.58408815 0 prediction 0.866275562701139 Functional Loss - C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93494790 chr11:93494790 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_2870 0 0 1 0 0 Cytosol 0.438718588995606 0 0.1681763 0 hPsi_site_911 iPseU_CNN:0.1681763;iRNA_PseU:0 912 chr1 36557280 36557280 1 + T C COAD 36557280 + 36557260 36557300 41 GTGCTGGAGTAGTCACTGTCTTCAAGAAGCTCCTGAACCCC GTGCTGGAGTAGTCACTGTCCTCAAGAAGCTCCTGAACCCC Direct Loss 0.933134879590469 0 0.7554347 0 prediction 0.866269759180939 Functional Loss - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36557280 chr1:36557280 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2871 0 0 1 0 1 Ribosome 0.438743979562928 0 0.5108694 0 hPsi_site_912 iPseU_CNN:0.5108694;iRNA_PseU:0 913 chr15 59911204 59911204 1 + T C OV 59911204 + 59911184 59911224 41 GAATAGCATGGAGTCAGAGGTACCTCCTAAGCACAAAGAAA GAATAGCATGGAGTCAGAGGCACCTCCTAAGCACAAAGAAA Direct Loss 0.933088952290774 0 0.6734659 0 prediction 0.866177904581547 Functional Loss - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911204 chr15:59911204 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_2872 0 0 0 0 0 exosome 0.43878112056864 0 0.3469318 0 hPsi_site_913 iPseU_CNN:0.3469318;iRNA_PseU:0 914 chr11 9499989 9499989 1 + A T LIHC 9499989 - 9499969 9500009 41 ACTGCATGGTGGATATAAGCTGTGGTACCATCTTCCAGCTG ACTGCATGGTGGATATAAGCAGTGGTACCATCTTCCAGCTG Direct Loss 0.933061485130263 0 0.29625797 0 prediction 0.866122970260526 Functional Loss - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9499989 chr11:9499989 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_2873 0 0 0 0 0 chromatin 0.437854974224199 0 0 0 hPsi_site_914 iPseU_CNN:0;iRNA_PseU:0 915 chr3 136573960 136573960 1 + T C UCEC 136573960 + 136573940 136573980 41 TCGTAGATGAGAAAATGGCTTATGTTGACATGGCTACAGTT TCGTAGATGAGAAAATGGCTCATGTTGACATGGCTACAGTT Direct Loss 0.933000938697679 0 0.34006113 0 prediction 0.866001877395359 Functional Loss - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136573960 chr3:136573960 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_2874 0 0 0 0 0 nucleolus 0.43869649957644 0 0 0 hPsi_site_915 iPseU_CNN:0;iRNA_PseU:0 916 chr2 177017383 177017383 1 + T C STAD 177017383 + 177017363 177017403 41 CCAAGCGGTCCCGAACGGCCTACACCCGGCAGCAAGTCCTA CCAAGCGGTCCCGAACGGCCCACACCCGGCAGCAAGTCCTA Direct Loss 0.932979248117455 0 0.39337993 0 prediction 0.865958496234911 Functional Loss - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177017383 chr2:177017383 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2875 0 0 0 0 1 exosome 0.438718256021131 0 0 0 hPsi_site_916 iPseU_CNN:0;iRNA_PseU:0 917 chrX 47518279 47518279 1 + T C HNSC 47518279 + 47518259 47518299 41 AAGGTCTCGTAGCGCAGCACTTTCTCCCCCGTGGCCTCCAC AAGGTCTCGTAGCGCAGCACCTTCTCCCCCGTGGCCTCCAC Direct Loss 0.932959768545745 0 0.6262492 0 prediction 0.86591953709149 Functional Loss - UXT ENSG00000126756 CDS Human protein_coding chrX:47518279 chrX:47518279 synonymous SNV . 0 21 hPsi_associated_SNPs_2876 0 0 0 0 0 Ribosome 0.438720193803125 0 0.2524984 0 hPsi_site_917 iPseU_CNN:0.2524984;iRNA_PseU:0 918 chr11 124489328 124489328 1 + T A rs35607342 124489328 + 124489308 124489348 41 TCACCTCCGCCACTTACCTATACCTTGGTCATTTCCATCTG TCACCTCCGCCACTTACCTAAACCTTGGTCATTTCCATCTG Direct Loss 0.932921851705063 0 0.36049455 0 prediction 0.865843703410127 Functional Loss - PANX3 ENSG00000154143 CDS Human protein_coding chr11:124489328 chr11:124489328 nonsynonymous SNV 0.984 4 21 hPsi_associated_SNPs_2877 0 0 0 0 0 unknown 0.438736363413994 0 0 0 hPsi_site_918 iPseU_CNN:0;iRNA_PseU:0 919 chr12 122691093 122691093 1 + T C COAD 122691093 + 122691073 122691113 41 GTCACCGTCTCTTCTTGACCTATCGTCACTGCCGAAATTTC GTCACCGTCTCTTCTTGACCCATCGTCACTGCCGAAATTTC Direct Loss 0.932815353246983 0 0.68244374 0 prediction 0.865630706493966 Functional Loss - B3GNT4 ENSG00000176383 CDS Human protein_coding chr12:122691093 chr12:122691093 nonsynonymous SNV 0.917 1 21 hPsi_associated_SNPs_2878 0 0 0 0 0 chromatin 0.43871871199977 0 0.36488748 0 hPsi_site_919 iPseU_CNN:0.36488748;iRNA_PseU:0 920 chr11 48266720 48266720 1 + T C STAD 48266720 + 48266700 48266740 41 GCAGAGGGTTTGCTTTGTGATATTTCTGTTCTTGTACACAG GCAGAGGGTTTGCTTTGTGACATTTCTGTTCTTGTACACAG Direct Loss 0.932812579131249 0 0.5720593 0 prediction 0.865625158262499 Functional Loss - OR4X2 ENSG00000172208 CDS Human polymorphic_pseudogene chr11:48266720 chr11:48266720 nonsynonymous SNV 0.164 0 21 hPsi_associated_SNPs_2879 0 0 0 0 0 unknown 0.438698305701987 0 0.1441186 0 hPsi_site_920 iPseU_CNN:0.1441186;iRNA_PseU:0 921 chr3 9848359 9848359 1 + T C rs575847003 9848359 + 9848339 9848379 41 AGGTGGGGAGGGAGGGAGGTTTCAGACTCCAGTTTCTCCCT AGGTGGGGAGGGAGGGAGGTCTCAGACTCCAGTTTCTCCCT Direct Loss 0.932770660637546 0 0.7949406 0 prediction 0.865541321275092 Functional Loss - ARPC4 ENSG00000241553 UTR3 Human protein_coding chr3:9848359 chr3:9848359 . . 0 21 hPsi_associated_SNPs_2880 0 0 1 0 0 Cytosol 0.438718588798176 0 0.5898812 0 hPsi_site_921 iPseU_CNN:0.5898812;iRNA_PseU:0 922 chr14 92915458 92915458 1 + A G rs540053008 92915458 - 92915438 92915478 41 GTTACCGTTTGCAATGCTCTTTTGTTTGACTGTGAAAAAGG GTTACCGTTTGCAATGCTCTCTTGTTTGACTGTGAAAAAGG Direct Loss 0.932760261196527 0 0.2794135 0 prediction 0.865520522393054 Functional Loss - SLC24A4 ENSG00000140090 CDS Human protein_coding chr14:92915458 chr14:92915458 nonsynonymous SNV 0.987 1 21 hPsi_associated_SNPs_2881 0 0 0 0 0 exosome 0.440260331055746 0 0 0 hPsi_site_922 iPseU_CNN:0;iRNA_PseU:0 923 chr7 135307611 135307611 1 + T C SKCM 135307611 + 135307591 135307631 41 ACATAGCCATTATTGAAAGTTATGGCGCCGCCCTCATGGAA ACATAGCCATTATTGAAAGTCATGGCGCCGCCCTCATGGAA Direct Loss 0.932750898112397 0 0.37586075 0 prediction 0.865501796224794 Functional Loss - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135307611 chr7:135307611 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2882 0 0 1 0 1 Cytosol 0.438718108903868 0 0 0 hPsi_site_923 iPseU_CNN:0;iRNA_PseU:0 924 chr2 162036210 162036210 1 + T C COAD 162036210 + 162036190 162036230 41 GCGAGCAACTCAATAAAGCGTATGAAGCCTTCCGGCAGGCA GCGAGCAACTCAATAAAGCGCATGAAGCCTTCCGGCAGGCA Direct Loss 0.932627866059435 0 0.6570644 0 prediction 0.865255732118869 Functional Loss - TANK ENSG00000136560 CDS Human protein_coding chr2:162036210 chr2:162036210 nonsynonymous SNV 0.988 4 21 hPsi_associated_SNPs_2883 0 0 1 0 2 Cytosol 0.438718593448005 0 0.3141288 0 hPsi_site_924 iPseU_CNN:0.3141288;iRNA_PseU:0 925 chr20 34022548 34022548 1 + T C STAD 34022548 + 34022528 34022568 41 GGGCACTAATGTCAAACACGTACCTCTGCTTCCTGACCACG GGGCACTAATGTCAAACACGCACCTCTGCTTCCTGACCACG Direct Loss 0.932597763429086 0 0.62964976 0 prediction 0.865195526858172 Functional Loss - GDF5;GDF5OS ENSG00000125965;ENSG00000204183 CDS Human other chr20:34022548 chr20:34022548 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2884 0 0 0 0 0 unknown 0.438841883165506 0 0.25929952 0 hPsi_site_925 iPseU_CNN:0.25929952;iRNA_PseU:0 926 chr19 18724957 18724957 1 + T C LUAD 18724957 + 18724937 18724977 41 GAGGCAGAGCAGCAGGCCTGTAGCCACGGCTGCTGGAGCCA GAGGCAGAGCAGCAGGCCTGCAGCCACGGCTGCTGGAGCCA Direct Loss 0.932517105031294 0 0.53861576 0 prediction 0.865034210062588 Functional Loss - TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18724957 chr19:18724957 synonymous SNV . 0 21 hPsi_associated_SNPs_2885 0 0 1 0 2 Cytosol 0.438721315873194 0 0.07723152 0 hPsi_site_926 iPseU_CNN:0.07723152;iRNA_PseU:0 927 chr11 113651059 113651059 1 + T A LUSC 113651059 + 113651039 113651079 41 TTTCCTGGCTCTTGGTGGGCTACTCCTCATCTTCTCGGCCT TTTCCTGGCTCTTGGTGGGCAACTCCTCATCTTCTCGGCCT Direct Loss 0.932516226204731 0 0.6537179 0 prediction 0.865032452409463 Functional Loss - CLDN25 ENSG00000228607 CDS Human protein_coding chr11:113651059 chr11:113651059 nonsynonymous SNV 0.002 2 21 hPsi_associated_SNPs_2886 0 0 0 0 0 unknown 0.438715689034048 0 0.3074358 0 hPsi_site_927 iPseU_CNN:0.3074358;iRNA_PseU:0 928 chr10 134015519 134015519 1 + T G UCEC 134015519 + 134015499 134015539 41 ATGCTGCCAAAATCTTCAATTTTTACCCAAGGAAGGGGCGA ATGCTGCCAAAATCTTCAATGTTTACCCAAGGAAGGGGCGA Direct Loss 0.932490254318581 0 0.49870166 0 prediction 0.864980508637163 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134015519 chr10:134015519 nonsynonymous SNV 0.969 1 21 hPsi_associated_SNPs_2887 0 0 1 0 1 Endoplasmic reticulum 0.438718603889135 0 0 0 hPsi_site_928 iPseU_CNN:0;iRNA_PseU:0 929 chr7 30185847 30185847 1 + T C UCEC 30185847 + 30185827 30185867 41 TCTTGCAGCTAGCACAGGATTACATCTCCTCCTGCGGCAAG TCTTGCAGCTAGCACAGGATCACATCTCCTCCTGCGGCAAG Direct Loss 0.932420539081441 0 0.6253183 0 prediction 0.864841078162882 Functional Loss - MTURN ENSG00000180354 CDS Human protein_coding chr7:30185847 chr7:30185847 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2888 0 0 1 0 2 Endoplasmic reticulum 0.438715922176622 0 0.2506366 0 hPsi_site_929 iPseU_CNN:0.2506366;iRNA_PseU:0 930 chr5 1038002 1038002 1 + T A LUSC 1038002 + 1037982 1038022 41 TCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCG TCCCGCTCCCAGGAGCCAGAAACACATGCCGTACACCACCG Direct Loss 0.932404481079107 0 0.83159715 0 prediction 0.864808962158214 Functional Loss - NKD2 ENSG00000145506 CDS Human protein_coding chr5:1038002 chr5:1038002 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_2889 0 0 0 4 0 exosome 0.438687437870073 0 0.6631943 0 hPsi_site_930 iPseU_CNN:0.6631943;iRNA_PseU:0 Age-related macular degeneration (choroidal neovascularisation) 931 chr8 124799566 124799566 1 + T C STAD 124799566 + 124799546 124799586 41 CGAAGCGCATCGCATTCCTGTTTGACTCCACTCTTACTGCC CGAAGCGCATCGCATTCCTGCTTGACTCCACTCTTACTGCC Direct Loss 0.932399739500001 0 0.84241664 0 prediction 0.864799479000002 Functional Loss - FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124799566 chr8:124799566 nonsynonymous SNV 0.902 4 21 hPsi_associated_SNPs_2890 0 0 0 0 2 Ribosome 0.438721157358379 0 0.68483328 0 hPsi_site_931 iPseU_CNN:0.68483328;iRNA_PseU:0 932 chr16 87636909 87636909 1 + T G OV 87636909 + 87636889 87636929 41 GCTTCGAGGTGCTGGGCGTCTACACCTGGCCCAGCGGCAAC GCTTCGAGGTGCTGGGCGTCGACACCTGGCCCAGCGGCAAC Direct Loss 0.932391966633191 0 0.7388705 0 prediction 0.864783933266383 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87636909 chr16:87636909 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2891 0 0 0 0 0 chromatin 0.438773895822359 0 0.477741 0 hPsi_site_932 iPseU_CNN:0.477741;iRNA_PseU:0 933 chr14 62213714 62213714 1 + T C COAD 62213714 + 62213694 62213734 41 GATTACCACAGCTGACCAGTTATGATTGTGAAGTTAATGCT GATTACCACAGCTGACCAGTCATGATTGTGAAGTTAATGCT Direct Loss 0.932377977788329 0 0.5030096 0 prediction 0.864755955576657 Functional Loss - HIF1A ENSG00000100644 CDS Human protein_coding chr14:62213714 chr14:62213714 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_2892 0 0 1 1 1 Cytosol 0.436326365958232 0 0.00601919999999989 0 hPsi_site_933 iPseU_CNN:0.00601919999999989;iRNA_PseU:0 934 chr17 40835871 40835871 1 + T C LUAD 40835871 + 40835851 40835891 41 AGGAGCTGGTGGGTCCCCTGTATGCACGCTCCCTGGGCGCC AGGAGCTGGTGGGTCCCCTGCATGCACGCTCCCTGGGCGCC Direct Loss 0.932292586945417 0 0.5034079 0 prediction 0.864585173890834 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40835871 chr17:40835871 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2893 0 0 1 0 2 Cytosol 0.438718238491439 0 0.00681580000000004 0 hPsi_site_934 iPseU_CNN:0.00681580000000004;iRNA_PseU:0 935 chr10 99330233 99330233 1 + T G UCEC 99330233 + 99330213 99330253 41 AGACCAAGATCCAGAAAGATTTTGTCATCCAGGTCATCATC AGACCAAGATCCAGAAAGATGTTGTCATCCAGGTCATCATC Direct Loss 0.932152802668068 0 0.5712583 0 prediction 0.864305605336136 Functional Loss - UBTD1 ENSG00000165886 CDS Human protein_coding chr10:99330233 chr10:99330233 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2894 0 0 1 0 0 Cytosol 0.438718650994897 0 0.1425166 0 hPsi_site_935 iPseU_CNN:0.1425166;iRNA_PseU:0 936 chr1 26607726 26607726 1 + T G rs7544 26607726 + 26607706 26607746 41 TGTCATTCCTAACCTAACCTTAGAGTCCCTCCCCCAATGCA TGTCATTCCTAACCTAACCTGAGAGTCCCTCCCCCAATGCA Direct Loss 0.932140279088326 0 0.6968235 0 prediction 0.864280558176653 Functional Loss - SH3BGRL3 ENSG00000142669 UTR3 Human protein_coding chr1:26607726 chr1:26607726 . . 0 21 hPsi_associated_SNPs_2895 0 0 1 0 0 Ribosome 0.438718592830006 0 0.393647 0 hPsi_site_936 iPseU_CNN:0.393647;iRNA_PseU:0 937 chr8 145139183 145139183 1 + T C KICH 145139183 + 145139163 145139203 41 ACCTTGACCTGCTCAATCTCTTCCAGACCTTCTGCCAGAAA ACCTTGACCTGCTCAATCTCCTCCAGACCTTCTGCCAGAAA Direct Loss 0.932000166772986 0 0.3400709 0 prediction 0.864000333545971 Functional Loss - GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139183 chr8:145139183 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2896 0 0 1 0 1 Endoplasmic reticulum 0.444850564410207 0 0 0 hPsi_site_937 iPseU_CNN:0;iRNA_PseU:0 938 chr1 27176863 27176863 1 + T C STAD 27176863 + 27176843 27176883 41 ACTATCGCTTCTTCTACGCGTTTATTCTCTCCCTCTCATTC ACTATCGCTTCTTCTACGCGCTTATTCTCTCCCTCTCATTC Direct Loss 0.931891233852707 0 0.6229614 0 prediction 0.863782467705415 Functional Loss - ZDHHC18 ENSG00000204160 CDS Human protein_coding chr1:27176863 chr1:27176863 nonsynonymous SNV 0.698 3 21 hPsi_associated_SNPs_2897 0 0 1 0 2 Ribosome 0.43871860773768 0 0.2459228 0 hPsi_site_938 iPseU_CNN:0.2459228;iRNA_PseU:0 939 chr4 41984529 41984529 1 + T A LUSC 41984529 + 41984509 41984549 41 AGTACGGCTCCTTTGCTGTTTAATGGCTGTCGCTCCGGGGA AGTACGGCTCCTTTGCTGTTAAATGGCTGTCGCTCCGGGGA Direct Loss 0.931889758248731 0 0.6998521 0 prediction 0.863779516497462 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984529 chr4:41984529 nonsynonymous SNV 0.450 1 21 hPsi_associated_SNPs_2898 0 0 1 0 0 Nucleus 0.438706281323671 0 0.3997042 0 hPsi_site_939 iPseU_CNN:0.3997042;iRNA_PseU:0 940 chr2 85857895 85857895 1 + T C UCEC 85857895 + 85857875 85857915 41 ACTTTCTGGAAGAAGACAATTATAAGAACATCAAACGTCCT ACTTTCTGGAAGAAGACAATCATAAGAACATCAAACGTCCT Direct Loss 0.931883581831268 0 0.30216467 0 prediction 0.863767163662537 Functional Loss - USP39 ENSG00000168883 CDS Human protein_coding chr2:85857895 chr2:85857895 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_2899 0 0 1 0 1 Cytosol 0.438713107479253 0 0 0 hPsi_site_940 iPseU_CNN:0;iRNA_PseU:0 941 chr9 101608342 101608342 1 + T C PRAD 101608342 + 101608322 101608362 41 GCTGTGGAAGCAGGAATGGATACCCTTATCATGCATCTCTG GCTGTGGAAGCAGGAATGGACACCCTTATCATGCATCTCTG Direct Loss 0.931872369553136 0 0.7413614 0 prediction 0.863744739106273 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101608342 chr9:101608342 synonymous SNV . 0 21 hPsi_associated_SNPs_2900 0 0 1 0 2 Ribosome 0.440071050959209 0 0.4827228 0 hPsi_site_941 iPseU_CNN:0.4827228;iRNA_PseU:0 942 chr16 31539854 31539854 1 + T C THCA 31539854 + 31539834 31539874 41 GGATGAACTTCTACATCAACTATTACAGGCAGCAGGTGACA GGATGAACTTCTACATCAACCATTACAGGCAGCAGGTGACA Direct Loss 0.931868676697621 0 0.23623869 0 prediction 0.863737353395241 Functional Loss - AHSP ENSG00000169877 CDS Human protein_coding chr16:31539854 chr16:31539854 nonsynonymous SNV 0.956 1 21 hPsi_associated_SNPs_2901 0 0 1 0 1 Cytosol 0.438799281601337 0 0 0 hPsi_site_942 iPseU_CNN:0;iRNA_PseU:0 943 chr19 41307039 41307039 1 + T C HNSC 41307039 + 41307019 41307059 41 ATATCGTGCCCTGCATGCGGTACTACGGCATCTGCGTCAAG ATATCGTGCCCTGCATGCGGCACTACGGCATCTGCGTCAAG Direct Loss 0.931847564999242 0 0.85343075 0 prediction 0.863695129998483 Functional Loss - EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41307039 chr19:41307039 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2902 0 0 1 0 0 chromatin 0.440684006052257 0 0.7068615 0 hPsi_site_943 iPseU_CNN:0.7068615;iRNA_PseU:0 944 chr8 39872792 39872792 1 + T C UCEC 39872792 + 39872772 39872812 41 TTCTGTACAGAATGAGGGATTACATGCCTCCTTCCCATAAG TTCTGTACAGAATGAGGGATCACATGCCTCCTTCCCATAAG Direct Loss 0.931840223584069 0 0.40955582 0 prediction 0.863680447168138 Functional Loss - IDO2 ENSG00000188676 CDS Human protein_coding chr8:39872792 chr8:39872792 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_2903 0 0 0 0 1 exosome 0.438718592993948 0 0 0 hPsi_site_944 iPseU_CNN:0;iRNA_PseU:0 945 chr5 174156229 174156229 1 + T G UCEC 174156229 + 174156209 174156249 41 CGGAAGCCGCGCACGCCCTTTACCACATCCCAGCTCCTCGC CGGAAGCCGCGCACGCCCTTGACCACATCCCAGCTCCTCGC Direct Loss 0.931824944382214 0 0.8030687 0 prediction 0.863649888764427 Functional Loss - MSX2 ENSG00000120149 CDS Human protein_coding chr5:174156229 chr5:174156229 nonsynonymous SNV 0.815 5 21 hPsi_associated_SNPs_2904 0 0 1 0 1 exosome 0.438395885896949 0 0.6061374 0 hPsi_site_945 iPseU_CNN:0.6061374;iRNA_PseU:0 946 chr12 57911081 57911081 1 + T C STAD 57911081 + 57911061 57911101 41 TCCAGGAGGTGAAACATAGGTACCCCCATTTTCATCTGAAG TCCAGGAGGTGAAACATAGGCACCCCCATTTTCATCTGAAG Direct Loss 0.931818740846649 0 0.41972482 0 prediction 0.863637481693297 Functional Loss - DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911081 chr12:57911081 nonsynonymous SNV 0.993 0 21 hPsi_associated_SNPs_2905 0 0 0 0 1 Cytosol 0.438718581117084 0 0 0 hPsi_site_946 iPseU_CNN:0;iRNA_PseU:0 947 chr17 62223767 62223767 1 + T C UCEC 62223767 + 62223747 62223787 41 ATCTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCC ATCTGCAGCGCTAGAGCATGCGCTTGCGCATAACTGGGGCC Direct Loss 0.931804291011263 0 0.45916966 0 prediction 0.863608582022527 Functional Loss - SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223767 chr17:62223767 . . 0 21 hPsi_associated_SNPs_2906 0 0 1 0 0 unknown 0.438718586743217 0 0 0 hPsi_site_947 iPseU_CNN:0;iRNA_PseU:0 948 chr14 53177863 53177863 1 + T C STAD 53177863 + 53177843 53177883 41 GGAACAAGAGTTGCTTTGGATATGACTACACTAACTATCAT GGAACAAGAGTTGCTTTGGACATGACTACACTAACTATCAT Direct Loss 0.931798538529074 0 0.5844408 0 prediction 0.863597077058149 Functional Loss - PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53177863 chr14:53177863 synonymous SNV . 0 21 hPsi_associated_SNPs_2907 0 0 1 0 2 Ribosome 0.43871796426024 0 0.1688816 0 hPsi_site_948 iPseU_CNN:0.1688816;iRNA_PseU:0 949 chr10 43882301 43882301 1 + A G rs142211325 43882301 - 43882281 43882321 41 CATGAAGAAGCTGTGGCAGCTATGTCCAAAGACAGGGCCAA CATGAAGAAGCTGTGGCAGCCATGTCCAAAGACAGGGCCAA Direct Loss 0.931792055742317 0 0.35381705 0 prediction 0.863584111484635 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882301 chr10:43882301 synonymous SNV . 0 21 hPsi_associated_SNPs_2908 0 0 1 0 0 Cytosol 0.439074732871817 0 0 0 hPsi_site_949 iPseU_CNN:0;iRNA_PseU:0 950 chr2 84518125 84518125 1 + T C LUSC 84518125 + 84518105 84518145 41 ACTGGATGGTGCACGGGTTTTATATTCCAGAAGGTTGGAAA ACTGGATGGTGCACGGGTTTCATATTCCAGAAGGTTGGAAA Direct Loss 0.931774878761275 0 0.4157703 0 prediction 0.863549757522549 Functional Loss - FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518125 chr2:84518125 . . 0 21 hPsi_associated_SNPs_2909 0 0 1 0 0 unknown 0.441920191471219 0 0 0 hPsi_site_950 iPseU_CNN:0;iRNA_PseU:0 951 chr2 27258102 27258102 1 + T C UCEC 27258102 + 27258082 27258122 41 ACCTGGCCAGCTATCTCAACTACAAGCTACAAGCTCCTCTA ACCTGGCCAGCTATCTCAACCACAAGCTACAAGCTCCTCTA Direct Loss 0.931772634340278 0 0.5906528 0 prediction 0.863545268680556 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27258102 chr2:27258102 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_2910 0 0 1 2 2 Ribosome 0.43870855004235 0 0.1813056 0 hPsi_site_951 iPseU_CNN:0.1813056;iRNA_PseU:0 952 chr6 116836906 116836906 1 + T A UCEC 116836906 + 116836886 116836926 41 GAGAAGGAGCAGTTGGAAAATACATTTCTGGACTATGCCAA GAGAAGGAGCAGTTGGAAAAAACATTTCTGGACTATGCCAA Direct Loss 0.931751057046235 0 0.44278154 0 prediction 0.863502114092469 Functional Loss - FAM26E ENSG00000178033 CDS Human protein_coding chr6:116836906 chr6:116836906 nonsynonymous SNV 0.557 0 21 hPsi_associated_SNPs_2911 0 0 0 0 0 exosome 0.438718592995102 0 0 0 hPsi_site_952 iPseU_CNN:0;iRNA_PseU:0 953 chr1 34684359 34684359 1 + T A SKCM 34684359 + 34684339 34684379 41 AGTGGGAATGGCATAAACTTTTAGATCTCCTCTTCTCCCTT AGTGGGAATGGCATAAACTTATAGATCTCCTCTTCTCCCTT Direct Loss 0.931739584226651 0 0.56690836 0 prediction 0.863479168453302 Functional Loss - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34684359 chr1:34684359 nonsynonymous SNV 0.341 4 21 hPsi_associated_SNPs_2912 0 0 0 0 1 unknown 0.43872905385742 0 0.13381672 0 hPsi_site_953 iPseU_CNN:0.13381672;iRNA_PseU:0 954 chrX 32305726 32305726 1 + T A OV 32305726 + 32305706 32305746 41 GCTTCCTGTAGCTTCACCCTTTCCACAGGCGTTGCACTTTG GCTTCCTGTAGCTTCACCCTATCCACAGGCGTTGCACTTTG Direct Loss 0.931667709768142 0 0.46948078 0 prediction 0.863335419536284 Functional Loss - DMD ENSG00000198947 CDS Human protein_coding chrX:32305726 chrX:32305726 nonsynonymous SNV 0.139 1 21 hPsi_associated_SNPs_2913 0 0 0 0 0 chromatin 0.438718560126179 0 0 0 hPsi_site_954 iPseU_CNN:0;iRNA_PseU:0 955 chr16 86546582 86546582 1 + T G UCEC 86546582 + 86546562 86546602 41 CATGTGTGACCGAAAGGAGTTTGTCTTCTCTTTCAACGCCA CATGTGTGACCGAAAGGAGTGTGTCTTCTCTTTCAACGCCA Direct Loss 0.93159195756489 0 0.3224937 0 prediction 0.863183915129779 Functional Loss - FOXF1 ENSG00000103241 CDS Human protein_coding chr16:86546582 chr16:86546582 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_2914 0 0 1 0 1 Cytoplasm 0.446061854747485 0 0 0 hPsi_site_955 iPseU_CNN:0;iRNA_PseU:0 956 chr15 74425183 74425183 1 + T C UCEC 74425183 + 74425163 74425203 41 CGTGCGCCTGCGTGGACAAGTACGCTCACCAGTTCGCGGAC CGTGCGCCTGCGTGGACAAGCACGCTCACCAGTTCGCGGAC Direct Loss 0.931585790025565 0 0.7250572 0 prediction 0.863171580051129 Functional Loss - ISLR2 ENSG00000167178 CDS Human protein_coding chr15:74425183 chr15:74425183 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_2915 0 0 0 0 1 Nucleus 0.432884124718579 0 0.4501144 0 hPsi_site_956 iPseU_CNN:0.4501144;iRNA_PseU:0 957 chr2 71377048 71377048 1 + T C LUAD 71377048 + 71377028 71377068 41 TCAAGCATTCTTTTCTAAATTACAAGATCAAGTAAAAATGC TCAAGCATTCTTTTCTAAATCACAAGATCAAGTAAAAATGC Direct Loss 0.931543061919252 0 0.28654003 0 prediction 0.863086123838505 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71377048 chr2:71377048 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2916 0 0 1 0 1 Cytosol 0.43871861787101 0 0 0 hPsi_site_957 iPseU_CNN:0;iRNA_PseU:0 958 chrX 115303767 115303767 1 + T C CHOL 115303767 + 115303747 115303787 41 CAAAAGGGTCCTAAAAAGGTTTCTAGCATATACATCTTCAA CAAAAGGGTCCTAAAAAGGTCTCTAGCATATACATCTTCAA Direct Loss 0.931542257409703 0 0.36236623 0 prediction 0.863084514819406 Functional Loss - AGTR2 ENSG00000180772 CDS Human protein_coding chrX:115303767 chrX:115303767 synonymous SNV . 0 21 hPsi_associated_SNPs_2917 0 0 0 0 0 unknown 0.439182519668059 0 0 0 hPsi_site_958 iPseU_CNN:0;iRNA_PseU:0 959 chr10 27012806 27012806 1 + T C COAD 27012806 + 27012786 27012826 41 CGAATTGGAAATACAACTGTTATATCTATTTTAACCCAAGT CGAATTGGAAATACAACTGTCATATCTATTTTAACCCAAGT Direct Loss 0.931516558724832 0 0.39256063 0 prediction 0.863033117449665 Functional Loss - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:27012806 chr10:27012806 synonymous SNV . 0 21 hPsi_associated_SNPs_2918 0 0 1 0 2 Ribosome 0.438718592848952 0 0 0 hPsi_site_959 iPseU_CNN:0;iRNA_PseU:0 960 chr11 55136274 55136274 1 + T A SKCM 55136274 + 55136254 55136294 41 ATGACTGTAGTTCTAACTTTTATAACTCCCATGCTGAACCC ATGACTGTAGTTCTAACTTTAATAACTCCCATGCTGAACCC Direct Loss 0.931499111344907 0 0.6536461 0 prediction 0.862998222689814 Functional Loss - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55136274 chr11:55136274 nonsynonymous SNV 0.123 0 21 hPsi_associated_SNPs_2919 0 0 0 0 0 unknown 0.438718592735411 0 0.3072922 0 hPsi_site_960 iPseU_CNN:0.3072922;iRNA_PseU:0 961 chr14 101530859 101530859 1 + T C UCEC 101530859 + 101530839 101530879 41 GGAAAGGATTCTGCTGTCGGTCCCACTCCAAAGTTCACAGA GGAAAGGATTCTGCTGTCGGCCCCACTCCAAAGTTCACAGA Direct Loss 0.931446391730301 0 0.25208932 0 prediction 0.862892783460602 Functional Loss - MIR541 ENSG00000216179 ncRNA_exonic Human miRNA chr14:101530859 chr14:101530859 . . 0 21 hPsi_associated_SNPs_2920 0 0 1 0 0 unknown 0.438718592995102 0 0 0 hPsi_site_961 iPseU_CNN:0;iRNA_PseU:0 962 chr20 334211 334211 1 + T C COAD 334211 + 334191 334231 41 ATGCCAGTGGCCAGTCATGGTTCTCGCCACCCGCCAGCCCC ATGCCAGTGGCCAGTCATGGCTCTCGCCACCCGCCAGCCCC Direct Loss 0.931435939352744 0 0.67744 0 prediction 0.862871878705489 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:334211 chr20:334211 nonsynonymous SNV 0.016 0 21 hPsi_associated_SNPs_2921 0 0 1 0 0 cytosol 0.438710332658413 0 0.35488 0 hPsi_site_962 iPseU_CNN:0.35488;iRNA_PseU:0 963 chr11 47595013 47595013 1 + A G LUSC 47595013 - 47594993 47595033 41 GGTGGCAAGACACTGCAAGATACCCTCTCCAACGCAGTCAT GGTGGCAAGACACTGCAAGACACCCTCTCCAACGCAGTCAT Direct Loss 0.931433413397344 0 0.7126999 0 prediction 0.862866826794688 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47595013 chr11:47595013 synonymous SNV . 0 21 hPsi_associated_SNPs_2922 0 0 1 0 0 nucleus 0.438724071422727 0 0.4253998 0 hPsi_site_963 iPseU_CNN:0.4253998;iRNA_PseU:0 964 chr6 27782998 27782998 1 + T C CESC 27782998 + 27782978 27783018 41 ACCGGCATCTCTTCCAAGGCTATGGGAATCATGAACTCCTT ACCGGCATCTCTTCCAAGGCCATGGGAATCATGAACTCCTT Direct Loss 0.93138947102657 0 0.31261405 0 prediction 0.86277894205314 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27782998 chr6:27782998 synonymous SNV . 0 21 hPsi_associated_SNPs_2923 0 0 1 0 0 nucleus 0.438718600013278 0 0 0 hPsi_site_964 iPseU_CNN:0;iRNA_PseU:0 965 chr19 35842879 35842879 1 + T G STAD 35842879 + 35842859 35842899 41 GTGTCACCTGGGTCTGGTCTTTGGGTTGGAGGCTCCAGGAG GTGTCACCTGGGTCTGGTCTGTGGGTTGGAGGCTCCAGGAG Direct Loss 0.931355677735647 0 0.24125227 0 prediction 0.862711355471293 Functional Loss - FFAR1 ENSG00000126266 CDS Human protein_coding chr19:35842879 chr19:35842879 nonsynonymous SNV 0.015 2 21 hPsi_associated_SNPs_2924 0 0 0 0 0 exosome 0.438718592995102 0 0 0 hPsi_site_965 iPseU_CNN:0;iRNA_PseU:0 966 chr10 5416041 5416041 1 + T C SKCM 5416041 + 5416021 5416061 41 AGAGTCCCCACCGCACCAAGTTCACCCTGTCCCTCGACGTC AGAGTCCCCACCGCACCAAGCTCACCCTGTCCCTCGACGTC Direct Loss 0.931331757313986 0 0.37261024 0 prediction 0.862663514627971 Functional Loss - UCN3 ENSG00000178473 CDS Human protein_coding chr10:5416041 chr10:5416041 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_2925 0 0 0 0 0 unknown 0.439055599347501 0 0 0 hPsi_site_966 iPseU_CNN:0;iRNA_PseU:0 967 chr9 135464673 135464673 1 + T C COAD 135464673 + 135464653 135464693 41 TGCTGGCGGAGGCAGGCAATTACTCAGCGCTCCAGCGGATG TGCTGGCGGAGGCAGGCAATCACTCAGCGCTCCAGCGGATG Direct Loss 0.931250968067409 0 0.7700461 0 prediction 0.862501936134818 Functional Loss - BARHL1 ENSG00000125492 CDS Human protein_coding chr9:135464673 chr9:135464673 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2926 0 0 0 0 1 unknown 0.437462387996872 0 0.5400922 0 hPsi_site_967 iPseU_CNN:0.5400922;iRNA_PseU:0 968 chr11 5443763 5443763 1 + T C SKCM 5443763 + 5443743 5443783 41 TTCCTTCATGGATTCTCCTTTATGGAGTCTTCTGTCCTCCT TTCCTTCATGGATTCTCCTTCATGGAGTCTTCTGTCCTCCT Direct Loss 0.931213945035395 0 0.3254267 0 prediction 0.862427890070789 Functional Loss - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5443763 chr11:5443763 synonymous SNV . 0 21 hPsi_associated_SNPs_2927 0 0 0 0 0 chromatin 0.438718592997921 0 0 0 hPsi_site_968 iPseU_CNN:0;iRNA_PseU:0 969 chr18 13826524 13826524 1 + T C LUSC 13826524 + 13826504 13826544 41 TTACCGTGTGCTGGGCCCCGTTCTTCCTTCATCTCACTTTA TTACCGTGTGCTGGGCCCCGCTCTTCCTTCATCTCACTTTA Direct Loss 0.931213065384886 0 0.56501484 0 prediction 0.862426130769771 Functional Loss - MC5R ENSG00000176136 CDS Human protein_coding chr18:13826524 chr18:13826524 nonsynonymous SNV 0.169 4 21 hPsi_associated_SNPs_2928 0 0 0 0 0 unknown 0.438728248032246 0 0.13002968 0 hPsi_site_969 iPseU_CNN:0.13002968;iRNA_PseU:0 970 chr1 236368456 236368456 1 + T A LIHC 236368456 + 236368436 236368476 41 GAATGGTCCCCAGCCATGGATTCAGTCCCAGATCTTATTTC GAATGGTCCCCAGCCATGGAATCAGTCCCAGATCTTATTTC Direct Loss 0.931207486945148 0 0.4430598 0 prediction 0.862414973890296 Functional Loss - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236368456 chr1:236368456 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2929 0 0 1 1 1 Ribosome 0.438719782959203 0 0 0 hPsi_site_970 iPseU_CNN:0;iRNA_PseU:0 971 chr1 35260203 35260203 1 + T C BLCA 35260203 + 35260183 35260223 41 GGAGCGGGCGCTGGCGGCCGTAGAGCGTCAGATGGCCAAGA GGAGCGGGCGCTGGCGGCCGCAGAGCGTCAGATGGCCAAGA Direct Loss 0.931160647423562 0 0.53436905 0 prediction 0.862321294847124 Functional Loss - GJA4 ENSG00000187513 CDS Human protein_coding chr1:35260203 chr1:35260203 nonsynonymous SNV 0.379 1 21 hPsi_associated_SNPs_2930 0 0 0 0 0 cytosol 0.438718912124174 0 0.0687381 0 hPsi_site_971 iPseU_CNN:0.0687381;iRNA_PseU:0 972 chr1 36646102 36646102 1 + T C rs78771983 36646102 + 36646082 36646122 41 TTCTCCCCCATACACACATATACACTCACAGCCTCTCTGGC TTCTCCCCCATACACACATACACACTCACAGCCTCTCTGGC Direct Loss 0.931156281875609 0 0.35063753 0 prediction 0.862312563751218 Functional Loss - MAP7D1 ENSG00000116871 UTR3 Human protein_coding chr1:36646102 chr1:36646102 . . 0 21 hPsi_associated_SNPs_2931 0 0 1 2 0 Ribosome 0.438719557064655 0 0 0 hPsi_site_972 iPseU_CNN:0;iRNA_PseU:0 973 chr2 27322348 27322348 1 + A G UCEC 27322348 - 27322328 27322368 41 AAAGCATCCGAGTGGAGCAATTTGCCATCAGGGCCCAGGGC AAAGCATCCGAGTGGAGCAACTTGCCATCAGGGCCCAGGGC Direct Loss 0.931106840276839 0 0.7576956 0 prediction 0.862213680553679 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27322348 chr2:27322348 synonymous SNV . 0 21 hPsi_associated_SNPs_2932 0 0 0 0 0 Endoplasmic reticulum 0.438718553126963 0 0.5153912 0 hPsi_site_973 iPseU_CNN:0.5153912;iRNA_PseU:0 974 chr7 37960746 37960746 1 + T A PRAD 37960746 + 37960726 37960766 41 ACAGCCGCGCCCTGCTCTCCTACGACGGGCTCAACCAGCGC ACAGCCGCGCCCTGCTCTCCAACGACGGGCTCAACCAGCGC Direct Loss 0.931078730061549 0 0.27759355 0 prediction 0.862157460123098 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960746 chr7:37960746 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_2933 0 0 1 0 1 Ribosome 0.438771488217507 0 0 0 hPsi_site_974 iPseU_CNN:0;iRNA_PseU:0 975 chr3 50220138 50220138 1 + T G SKCM 50220138 + 50220118 50220158 41 GAGCGCAATGATGATAAGCTTTACTTCTTCTTCCGTGAGCG GAGCGCAATGATGATAAGCTGTACTTCTTCTTCCGTGAGCG Direct Loss 0.931067353567039 0 0.48472986 0 prediction 0.862134707134079 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50220138 chr3:50220138 synonymous SNV . 0 21 hPsi_associated_SNPs_2934 0 0 0 0 2 Endoplasmic reticulum 0.438726616505778 0 0 0 hPsi_site_975 iPseU_CNN:0;iRNA_PseU:0 976 chr4 159627858 159627858 1 + T G PAAD 159627858 + 159627838 159627878 41 AACCCGATGGACAGATCAGTTTTGACCTCTTGTCATCTGTG AACCCGATGGACAGATCAGTGTTGACCTCTTGTCATCTGTG Direct Loss 0.93105111597988 0 0.469505 0 prediction 0.86210223195976 Functional Loss - ETFDH ENSG00000171503 CDS Human protein_coding chr4:159627858 chr4:159627858 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_2935 0 0 1 0 1 Ribosome 0.438717871785047 0 0 0 hPsi_site_976 iPseU_CNN:0;iRNA_PseU:0 977 chrX 125955414 125955414 1 + T A KIRP 125955414 + 125955394 125955434 41 TTCTCACTATGCCTCTTCCTTTTGCTCCTCCTCCGATATTT TTCTCACTATGCCTCTTCCTATTGCTCCTCCTCCGATATTT Direct Loss 0.931009548902604 0 0.47873342 0 prediction 0.862019097805208 Functional Loss - PRR32 ENSG00000183631 CDS Human protein_coding chrX:125955414 chrX:125955414 nonsynonymous SNV 0.548 2 21 hPsi_associated_SNPs_2936 0 0 0 0 0 unknown 0.438717465568974 0 0 0 hPsi_site_977 iPseU_CNN:0;iRNA_PseU:0 978 chr6 35438046 35438046 1 + T C STAD 35438046 + 35438026 35438066 41 TTTAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACA TTTAAATAAGGCAGGAAAGTCCCCTTCCCTGCTCACACACA Direct Loss 0.93097999330192 0 0.8180314 0 prediction 0.861959986603841 Functional Loss - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438046 chr6:35438046 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_2937 0 0 1 0 2 Cytosol 0.438718712192039 0 0.6360628 0 hPsi_site_978 iPseU_CNN:0.6360628;iRNA_PseU:0 979 chr16 3021825 3021825 1 + T G STAD 3021825 + 3021805 3021845 41 GCGCTGGGGACCTGGCCGCTTTGACTACTGGGGCAACTCCC GCGCTGGGGACCTGGCCGCTGTGACTACTGGGGCAACTCCC Direct Loss 0.930907048052215 0 0.43073353 0 prediction 0.861814096104429 Functional Loss - PAQR4 ENSG00000162073 CDS Human protein_coding chr16:3021825 chr16:3021825 nonsynonymous SNV 0.987 4 21 hPsi_associated_SNPs_2938 0 0 1 0 0 Ribosome 0.438717502331364 0 0 0 hPsi_site_979 iPseU_CNN:0;iRNA_PseU:0 980 chr10 118969607 118969607 1 + T A UCEC 118969607 + 118969587 118969627 41 AGAATGCCTTCTATTTCTGCTTTGTCACACTCACCACCATT AGAATGCCTTCTATTTCTGCATTGTCACACTCACCACCATT Direct Loss 0.930899420001505 0 0.6491729 0 prediction 0.86179884000301 Functional Loss - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118969607 chr10:118969607 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_2939 0 0 0 0 0 unknown 0.438718082903631 0 0.2983458 0 hPsi_site_980 iPseU_CNN:0.2983458;iRNA_PseU:0 981 chr19 46178255 46178255 1 + A C rs377713506 46178255 - 46178235 46178275 41 GCAGAGGCCGAGTTGGGAGGTTCCCTCTCCAAATGTGTCTT GCAGAGGCCGAGTTGGGAGGGTCCCTCTCCAAATGTGTCTT Direct Loss 0.930860555392813 0 0.36257613 0 prediction 0.861721110785627 Functional Loss - MIR642A;MIR642B ENSG00000207773 ncRNA_exonic Human miRNA chr19:46178255 chr19:46178255 . . 0 21 hPsi_associated_SNPs_2940 0 0 0 0 0 unknown 0.438718592172297 0 0 0 hPsi_site_981 iPseU_CNN:0;iRNA_PseU:0 982 chr15 78805532 78805532 1 + T G COAD 78805532 + 78805512 78805552 41 TCAGTGTTTGGGTTGAAAGTTTCCAAGGTCCGGCCACTTCC TCAGTGTTTGGGTTGAAAGTGTCCAAGGTCCGGCCACTTCC Direct Loss 0.930797763324794 0 0.68623865 0 prediction 0.861595526649589 Functional Loss - HYKK ENSG00000188266 CDS Human protein_coding chr15:78805532 chr15:78805532 synonymous SNV . 0 21 hPsi_associated_SNPs_2941 0 0 1 0 0 nucleolus 0.438718634221075 0 0.3724773 0 hPsi_site_982 iPseU_CNN:0.3724773;iRNA_PseU:0 983 chr22 26839103 26839103 1 + T C rs180855742 26839103 + 26839083 26839123 41 CGGGTGGTTTTCATGGTGGATTTGTGGCATCCAAACGTCGC CGGGTGGTTTTCATGGTGGACTTGTGGCATCCAAACGTCGC Direct Loss 0.930795760344113 0 0.7088337 0 prediction 0.861591520688226 Functional Loss - ASPHD2 ENSG00000128203 CDS Human protein_coding chr22:26839103 chr22:26839103 synonymous SNV . 0 21 hPsi_associated_SNPs_2942 0 0 0 0 1 Endoplasmic reticulum 0.438719469503743 0 0.4176674 0 hPsi_site_983 iPseU_CNN:0.4176674;iRNA_PseU:0 984 chr11 5602430 5602430 1 + T A COAD 5602430 + 5602410 5602450 41 CTGGCCAATTTGTGGCTAGGTTATAGCCTCATTTCCTTTGA CTGGCCAATTTGTGGCTAGGATATAGCCTCATTTCCTTTGA Direct Loss 0.930787235373483 0 0.46919546 0 prediction 0.861574470746966 Functional Loss - OR52B6 ENSG00000187747 CDS Human protein_coding chr11:5602430 chr11:5602430 synonymous SNV . 0 21 hPsi_associated_SNPs_2943 0 0 0 0 0 unknown 0.438718592987646 0 0 0 hPsi_site_984 iPseU_CNN:0;iRNA_PseU:0 985 chr12 4848407 4848407 1 + T C STAD 4848407 + 4848387 4848427 41 GTGAATGAAGCTCTGTCCATTATACAACGGGCCATCACCAG GTGAATGAAGCTCTGTCCATCATACAACGGGCCATCACCAG Direct Loss 0.930732818633504 0 0.7065655 0 prediction 0.861465637267007 Functional Loss - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4848407 chr12:4848407 synonymous SNV . 0 21 hPsi_associated_SNPs_2944 0 0 0 0 2 cytosol 0.43871813288172 0 0.413131 0 hPsi_site_985 iPseU_CNN:0.413131;iRNA_PseU:0 986 chr17 80445986 80445986 1 + T C COAD 80445986 + 80445966 80446006 41 GAGAGGTGCTGCATACCACGTACCAGAGCCAGGAGCGTGGC GAGAGGTGCTGCATACCACGCACCAGAGCCAGGAGCGTGGC Direct Loss 0.930719265066058 0 0.8373564 0 prediction 0.861438530132115 Functional Loss - NARF ENSG00000141562 CDS Human protein_coding chr17:80445986 chr17:80445986 nonsynonymous SNV 0.154 1 21 hPsi_associated_SNPs_2945 0 0 1 1 0 Cytosol 0.438992537105256 0 0.6747128 0 hPsi_site_986 iPseU_CNN:0.6747128;iRNA_PseU:0 987 chr13 64321231 64321231 1 + T C rs545867016 64321231 + 64321211 64321251 41 GCTGTGGGTATGGCTGTGGTTATGGAACTGGCTATGGCTGT GCTGTGGGTATGGCTGTGGTCATGGAACTGGCTATGGCTGT Direct Loss 0.930712077940923 0 0.30238378 0 prediction 0.861424155881847 Functional Loss - OR7E156P;LOC102723968 ENSG00000226974 CDS Human other chr13:64321231 chr13:64321231 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_2946 0 0 0 0 0 unknown 0.438768917350288 0 0 0 hPsi_site_987 iPseU_CNN:0;iRNA_PseU:0 988 chr10 18962969 18962969 1 + T C PRAD 18962969 + 18962949 18962989 41 AAACAGGATATGAAAGGGTGTATGACAGCAGCTGAAATCTC AAACAGGATATGAAAGGGTGCATGACAGCAGCTGAAATCTC Direct Loss 0.930680479408756 0 0.49607727 0 prediction 0.861360958817512 Functional Loss - ARL5B ENSG00000165997 CDS Human protein_coding chr10:18962969 chr10:18962969 synonymous SNV . 0 21 hPsi_associated_SNPs_2947 0 0 1 0 1 Endoplasmic reticulum 0.438712791356817 0 0 0 hPsi_site_988 iPseU_CNN:0;iRNA_PseU:0 989 chr19 920463 920463 1 + T G OV 920463 + 920443 920483 41 AGCTACGCCGCCTACGCGCTTAAGACCTGGGCTCACTGCAT AGCTACGCCGCCTACGCGCTGAAGACCTGGGCTCACTGCAT Direct Loss 0.930648005399552 0 0.7691136 0 prediction 0.861296010799105 Functional Loss - KISS1R ENSG00000116014 CDS Human protein_coding chr19:920463 chr19:920463 stoploss 0.966 0 21 hPsi_associated_SNPs_2948 0 0 0 0 0 nucleus 0.438718593497157 0 0.5382272 0 hPsi_site_989 iPseU_CNN:0.5382272;iRNA_PseU:0 990 chr17 79605767 79605767 1 + T A rs141485617 79605767 + 79605747 79605787 41 CCTGGGTGGGGGCCACAAGATATGAGCCAGTTTATCAATCT CCTGGGTGGGGGCCACAAGAAATGAGCCAGTTTATCAATCT Direct Loss 0.930621129299169 0 0.6257476 0 prediction 0.861242258598339 Functional Loss - TSPAN10 ENSG00000182446;ENSG00000182612 intergenic Human other chr17:79605767 chr17:79605767 . . 0 21 hPsi_associated_SNPs_2949 0 0 0 0 0 nucleoplasm 0.438718588440354 0 0.2514952 0 hPsi_site_990 iPseU_CNN:0.2514952;iRNA_PseU:0 991 chr10 26513569 26513569 1 + T C LUSC 26513569 + 26513549 26513589 41 AGGGGGCTCTGGCGATGGGATATTTTCTCCCGGTACATGAT AGGGGGCTCTGGCGATGGGACATTTTCTCCCGGTACATGAT Direct Loss 0.930620083859974 0 0.5497723 0 prediction 0.861240167719948 Functional Loss - GAD2 ENSG00000136750 CDS Human protein_coding chr10:26513569 chr10:26513569 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2950 0 0 0 0 1 exosome 0.438718635031675 0 0.0995446 0 hPsi_site_991 iPseU_CNN:0.0995446;iRNA_PseU:0 992 chr15 40457304 40457304 1 + T A UCEC 40457304 + 40457284 40457324 41 GGAACTGAGTAAAGAAAATGTACAACCTTTAAGGCAAGGGC GGAACTGAGTAAAGAAAATGAACAACCTTTAAGGCAAGGGC Direct Loss 0.930608582247876 0 0.6153334 0 prediction 0.861217164495752 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40457304 chr15:40457304 nonsynonymous SNV 0.969 4 21 hPsi_associated_SNPs_2951 0 0 1 0 2 Nucleus 0.438718720543021 0 0.2306668 0 hPsi_site_992 iPseU_CNN:0.2306668;iRNA_PseU:0 993 chr12 113532900 113532900 1 + T C STAD 113532900 + 113532880 113532920 41 ATCTACGGGGAGAAGACGGGTACGCAGCCGCCTGGGAAGAT ATCTACGGGGAGAAGACGGGCACGCAGCCGCCTGGGAAGAT Direct Loss 0.930599359602114 0 0.879045 0 prediction 0.861198719204227 Functional Loss - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113532900 chr12:113532900 synonymous SNV . 0 21 hPsi_associated_SNPs_2952 0 0 0 0 1 Endoplasmic reticulum 0.43871859237377 0 0.75809 0 hPsi_site_993 iPseU_CNN:0.75809;iRNA_PseU:0 994 chr19 16060305 16060305 1 + T C rs187591554 16060305 + 16060285 16060325 41 GGGGATGATGGTGACAACGATAGTTTTCCACCTCACTTTCT GGGGATGATGGTGACAACGACAGTTTTCCACCTCACTTTCT Direct Loss 0.930570475365441 0 0.48206994 0 prediction 0.861140950730882 Functional Loss - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060305 chr19:16060305 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_2953 0 0 0 0 0 unknown 0.438718590977024 0 0 0 hPsi_site_994 iPseU_CNN:0;iRNA_PseU:0 995 chr19 7960576 7960576 1 + T C STAD 7960576 + 7960556 7960596 41 GGTGGGACGTGCTGGCCGAGTACCTCACCGTGGCCATGCTC GGTGGGACGTGCTGGCCGAGCACCTCACCGTGGCCATGCTC Direct Loss 0.930540027309828 0 0.84361506 0 prediction 0.861080054619656 Functional Loss - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7960576 chr19:7960576 nonsynonymous SNV 0.984 4 21 hPsi_associated_SNPs_2954 0 0 1 0 2 chromatin 0.438561931783532 0 0.68723012 0 hPsi_site_995 iPseU_CNN:0.68723012;iRNA_PseU:0 996 chr22 51010489 51010489 1 + T C COAD 51010489 + 51010469 51010509 41 GGTGCGAGCGCAGGGTTCGGTTTGCCCAGGCAGTGCCCGGT GGTGCGAGCGCAGGGTTCGGCTTGCCCAGGCAGTGCCCGGT Direct Loss 0.930529734869243 0 0.6249242 0 prediction 0.861059469738485 Functional Loss - CPT1B ENSG00000205560 CDS Human protein_coding chr22:51010489 chr22:51010489 synonymous SNV . 0 21 hPsi_associated_SNPs_2955 0 0 0 0 0 nucleolus 0.438693270545945 0 0.2498484 0 hPsi_site_996 iPseU_CNN:0.2498484;iRNA_PseU:0 997 chr16 68293320 68293320 1 + T C rs3743739 68293320 + 68293300 68293340 41 CAGCTGCACTGCCTCTATGGTACTGGCGTCCCCACACCAGA CAGCTGCACTGCCTCTATGGCACTGGCGTCCCCACACCAGA Direct Loss 0.930529414455336 0 0.45118272 0 prediction 0.861058828910672 Functional Loss - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68293320 chr16:68293320 synonymous SNV . 0 21 hPsi_associated_SNPs_2956 0 0 0 1 0 Ribosome 0.438734941037565 0 0 0 hPsi_site_997 iPseU_CNN:0;iRNA_PseU:0 998 chr13 88328560 88328560 1 + T C UCEC 88328560 + 88328540 88328580 41 TTTGAGCACCACGGGGTATTTACACACCACCCCGGCGTCAG TTTGAGCACCACGGGGTATTCACACACCACCCCGGCGTCAG Direct Loss 0.930491357540349 0 0.8075015 0 prediction 0.860982715080698 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328560 chr13:88328560 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_2957 0 0 1 0 1 nucleus 0.438718575970925 0 0.615003 0 hPsi_site_998 iPseU_CNN:0.615003;iRNA_PseU:0 999 chr16 57785583 57785583 1 + T C COAD 57785583 + 57785563 57785603 41 AGGCCGTGCGGTGTCTCCGGTTCAGCCCCGATGGGAAGTGG AGGCCGTGCGGTGTCTCCGGCTCAGCCCCGATGGGAAGTGG Direct Loss 0.930469333912434 0 0.79286873 0 prediction 0.860938667824869 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57785583 chr16:57785583 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_2958 0 0 1 0 2 Cytosol 0.438718594568988 0 0.58573746 0 hPsi_site_999 iPseU_CNN:0.58573746;iRNA_PseU:0 1000 chrX 129498882 129498882 1 + T C rs73634087 129498882 + 129498862 129498902 41 TTCAAGCCTTATGAACACTTTATACTTCACAGAAATGCCAG TTCAAGCCTTATGAACACTTCATACTTCACAGAAATGCCAG Direct Loss 0.930468265694577 0 0.4648825 0 prediction 0.860936531389153 Functional Loss - SLC25A14 ENSG00000102078 UTR3 Human protein_coding chrX:129498882 chrX:129498882 . . 0 21 hPsi_associated_SNPs_2959 0 0 0 8 0 Endoplasmic reticulum 0.438709912071637 0 0 0 hPsi_site_1000 iPseU_CNN:0;iRNA_PseU:0 1001 chr9 107267257 107267257 1 + T C HNSC 107267257 + 107267237 107267277 41 GAAGGTCGAAGTAAAGCCTTTTCAACGTGCACAGCCCACCT GAAGGTCGAAGTAAAGCCTTCTCAACGTGCACAGCCCACCT Direct Loss 0.930463633076085 0 0.69574547 0 prediction 0.860927266152169 Functional Loss - OR13F1 ENSG00000186881 CDS Human protein_coding chr9:107267257 chr9:107267257 synonymous SNV . 0 21 hPsi_associated_SNPs_2960 0 0 0 0 0 unknown 0.438719081258547 0 0.39149094 0 hPsi_site_1001 iPseU_CNN:0.39149094;iRNA_PseU:0 1002 chr19 57932633 57932633 1 + T C rs61733518 57932633 + 57932613 57932653 41 AGCAAATGTGGGAAATTTTTTATGGACAGCTCCACACTCAT AGCAAATGTGGGAAATTTTTCATGGACAGCTCCACACTCAT Direct Loss 0.930415807741224 0 0.48679093 0 prediction 0.860831615482448 Functional Loss - ZNF17 ENSG00000186272 CDS Human protein_coding chr19:57932633 chr19:57932633 synonymous SNV . 0 21 hPsi_associated_SNPs_2961 0 0 1 0 0 nucleus 0.438718268445432 0 0 0 hPsi_site_1002 iPseU_CNN:0;iRNA_PseU:0 1003 chr18 56620797 56620797 1 + T C UCEC 56620797 + 56620777 56620817 41 GAAGGGCCTCCAAACTTGGGTATAAACTTGCCTTTGAGCAT GAAGGGCCTCCAAACTTGGGCATAAACTTGCCTTTGAGCAT Direct Loss 0.930336334786981 0 0.6002388 0 prediction 0.860672669573962 Functional Loss - ZNF532 ENSG00000074657 CDS Human protein_coding chr18:56620797 chr18:56620797 synonymous SNV . 0 21 hPsi_associated_SNPs_2962 0 0 0 0 1 Cytosol 0.43870422572409 0 0.2004776 0 hPsi_site_1003 iPseU_CNN:0.2004776;iRNA_PseU:0 1004 chr9 133901830 133901830 1 + T C LUAD 133901830 + 133901810 133901850 41 ACGGCCGGCCCGAGGGCCAGTACCTGCGCCCCGGCGAGGAC ACGGCCGGCCCGAGGGCCAGCACCTGCGCCCCGGCGAGGAC Direct Loss 0.930305276568743 0 0.5057761 0 prediction 0.860610553137486 Functional Loss - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133901830 chr9:133901830 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_2963 0 0 0 0 0 chromatin 0.43871859346066 0 0.0115521999999999 0 hPsi_site_1004 iPseU_CNN:0.0115521999999999;iRNA_PseU:0 1005 chr7 30668232 30668232 1 + T C LGG 30668232 + 30668212 30668252 41 TCGGCCTGGGTAGGATCATGTATACGGTATTTGAACATACA TCGGCCTGGGTAGGATCATGCATACGGTATTTGAACATACA Direct Loss 0.930291796753165 0 0.66720647 0 prediction 0.860583593506329 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30668232 chr7:30668232 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_2964 0 0 1 0 2 Cytosol 0.438718592971297 0 0.33441294 0 hPsi_site_1005 iPseU_CNN:0.33441294;iRNA_PseU:0 1006 chr6 28693802 28693802 1 + T C rs116446793 28693802 + 28693782 28693822 41 AACAGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGCGC AACAGTCTCCGTGGGCTCCGCAGCTTAGTTGGTTAAAGCGC Direct Loss 0.930290940200237 0 0.506372 0 prediction 0.860581880400473 Functional Loss - LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693802 chr6:28693802 . . 0 21 hPsi_associated_SNPs_2965 0 0 1 0 0 unknown 0.438663085355399 0 0.0127440000000001 0 hPsi_site_1006 iPseU_CNN:0.0127440000000001;iRNA_PseU:0 1007 chr17 42232723 42232723 1 + T A KIRC 42232723 + 42232703 42232743 41 CCAACAACCTGGTCCATATTTACAGCCCGGATTCTGGGGAT CCAACAACCTGGTCCATATTAACAGCCCGGATTCTGGGGAT Direct Loss 0.930289152639611 0 0.45121157 0 prediction 0.860578305279222 Functional Loss - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42232723 chr17:42232723 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_2966 0 0 1 0 2 chromatin 0.438718598307232 0 0 0 hPsi_site_1007 iPseU_CNN:0;iRNA_PseU:0 1008 chr17 21204266 21204266 1 + T C rs2230435 21204266 + 21204246 21204286 41 AACATGCGCACGGTCGACTGTTTCTACACTGTCACCTTCTA AACATGCGCACGGTCGACTGCTTCTACACTGTCACCTTCTA Direct Loss 0.930276557936876 0 0.4518177 0 prediction 0.860553115873752 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21204266 chr17:21204266 synonymous SNV . 0 21 hPsi_associated_SNPs_2967 0 0 1 0 2 Ribosome 0.438934661430706 0 0 0 hPsi_site_1008 iPseU_CNN:0;iRNA_PseU:0 1009 chr6 26022200 26022200 1 + T G CESC 26022200 + 26022180 26022220 41 AAGCGCCAGGGACGCACCCTTTATGGCTTTGGCGGTTAAGG AAGCGCCAGGGACGCACCCTGTATGGCTTTGGCGGTTAAGG Direct Loss 0.930256344368696 0 0.31349623 0 prediction 0.860512688737392 Functional Loss - HIST1H4A ENSG00000196176 CDS Human other chr6:26022200 chr6:26022200 synonymous SNV . 0 21 hPsi_associated_SNPs_2968 0 0 1 0 0 exosome 0.438718592797346 0 0 0 hPsi_site_1009 iPseU_CNN:0;iRNA_PseU:0 1010 chr8 92097057 92097057 1 + T G UCEC 92097057 + 92097037 92097077 41 GGAGAACATTATAATTCGGTTACACGGTTGGTAAACATAGT GGAGAACATTATAATTCGGTGACACGGTTGGTAAACATAGT Direct Loss 0.93021148348613 0 0.28061002 0 prediction 0.86042296697226 Functional Loss - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92097057 chr8:92097057 synonymous SNV . 0 21 hPsi_associated_SNPs_2969 0 0 1 0 1 Ribosome 0.438718592892293 0 0 0 hPsi_site_1010 iPseU_CNN:0;iRNA_PseU:0 1011 chr17 37822111 37822111 1 + T C LIHC 37822111 + 37822091 37822131 41 TGCAGGAGTACCAGCTGCCCTACCAGCGGGTACTGCCGCTG TGCAGGAGTACCAGCTGCCCCACCAGCGGGTACTGCCGCTG Direct Loss 0.930201520007939 0 0.55420905 0 prediction 0.860403040015877 Functional Loss - TCAP ENSG00000173991 CDS Human protein_coding chr17:37822111 chr17:37822111 nonsynonymous SNV 0.982 5 21 hPsi_associated_SNPs_2970 0 0 0 0 0 Endoplasmic reticulum 0.438718592983847 0 0.1084181 0 hPsi_site_1011 iPseU_CNN:0.1084181;iRNA_PseU:0 1012 chr9 100823084 100823084 1 + T C rs13049 100823084 + 100823064 100823104 41 GAGTGTGGGGCTGATTGTGCTAAGTTCCAGAAGAGTGAGCT GAGTGTGGGGCTGATTGTGCCAAGTTCCAGAAGAGTGAGCT Direct Loss 0.930196902532761 0 0.2727782 0 prediction 0.860393805065521 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100823084 chr9:100823084 synonymous SNV . 0 21 hPsi_associated_SNPs_2971 0 0 1 0 1 Ribosome 0.438718583667166 0 0 0 hPsi_site_1012 iPseU_CNN:0;iRNA_PseU:0 1013 chr13 43180943 43180943 1 + T A STAD 43180943 + 43180923 43180963 41 ATAAACGTTGGTGGATTTTTTAAGTTACGGTCTGGAGAGGA ATAAACGTTGGTGGATTTTTAAAGTTACGGTCTGGAGAGGA Direct Loss 0.930119178629237 0 0.33690864 0 prediction 0.860238357258474 Functional Loss - TNFSF11 ENSG00000120659 CDS Human protein_coding chr13:43180943 chr13:43180943 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_2972 0 0 0 0 0 exosome 0.438742087750792 0 0 0 hPsi_site_1013 iPseU_CNN:0;iRNA_PseU:0 1014 chr19 16799107 16799107 1 + T A OV 16799107 + 16799087 16799127 41 GGTGGGCCAGGAGCTCAGCATTCGGCCATGCCCGCCAAGTC GGTGGGCCAGGAGCTCAGCAATCGGCCATGCCCGCCAAGTC Direct Loss 0.930090614765703 0 0.30883068 0 prediction 0.860181229531407 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16799107 chr19:16799107 nonsynonymous SNV 0.064 0 21 hPsi_associated_SNPs_2973 0 0 0 0 0 Ribosome 0.438718596403127 0 0 0 hPsi_site_1014 iPseU_CNN:0;iRNA_PseU:0 1015 chr11 94801361 94801361 1 + T A rs550551993 94801361 + 94801341 94801381 41 GAAAAGGTTGTGTCACACTTTTCTACCTTTTTGCCAGTTTG GAAAAGGTTGTGTCACACTTATCTACCTTTTTGCCAGTTTG Direct Loss 0.930064614901964 0 0.3212276 0 prediction 0.860129229803927 Functional Loss - SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94801361 chr11:94801361 . . 0 21 hPsi_associated_SNPs_2974 0 0 1 0 0 Cytosol 0.438725893731269 0 0 0 hPsi_site_1015 iPseU_CNN:0;iRNA_PseU:0 1016 chr19 58928693 58928693 1 + T C STAD 58928693 + 58928673 58928713 41 TTCACACTGGAGAAAGGCCTTACGAGTGCAGCAAATGTGGT TTCACACTGGAGAAAGGCCTCACGAGTGCAGCAAATGTGGT Direct Loss 0.930022657299968 0 0.6438493 0 prediction 0.860045314599937 Functional Loss - ZNF584 ENSG00000171574 CDS Human protein_coding chr19:58928693 chr19:58928693 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_2975 0 0 1 0 0 membrane 0.439038829880397 0 0.2876986 0 hPsi_site_1016 iPseU_CNN:0.2876986;iRNA_PseU:0 1017 chr1 229770818 229770818 1 + T A LGG 229770818 + 229770798 229770838 41 GGTGGCCTTGCTGAGCCAGCTTTGCTGGTCGGCCTGCAGGC GGTGGCCTTGCTGAGCCAGCATTGCTGGTCGGCCTGCAGGC Direct Loss 0.930014887990904 0 0.46502998 0 prediction 0.860029775981809 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770818 chr1:229770818 nonsynonymous SNV 0.854 4 21 hPsi_associated_SNPs_2976 0 0 1 0 0 Nucleus 0.441440713687295 0 0 0 hPsi_site_1017 iPseU_CNN:0;iRNA_PseU:0 1018 chr9 108467919 108467919 1 + T C UCEC 108467919 + 108467899 108467939 41 AGAATCCTATTTCAAGCTGGTTTACTGCTATGCTCCACTGT AGAATCCTATTTCAAGCTGGCTTACTGCTATGCTCCACTGT Direct Loss 0.929996480290162 0 0.62446105 0 prediction 0.859992960580324 Functional Loss - TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108467919 chr9:108467919 nonsynonymous SNV 0.991 0 21 hPsi_associated_SNPs_2977 0 0 1 0 1 Ribosome 0.438718698992316 0 0.2489221 0 hPsi_site_1018 iPseU_CNN:0.2489221;iRNA_PseU:0 1019 chr11 130343138 130343138 1 + T C HNSC 130343138 + 130343118 130343158 41 TGAAGGGCAGTCTGCTGCGGTACAGCGGCACGGGCACAGCG TGAAGGGCAGTCTGCTGCGGCACAGCGGCACGGGCACAGCG Direct Loss 0.929941533442925 0 0.8256229 0 prediction 0.859883066885851 Functional Loss - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130343138 chr11:130343138 nonsynonymous SNV 0.962 3 21 hPsi_associated_SNPs_2978 0 0 0 0 0 exosome 0.438718585826625 0 0.6512458 0 hPsi_site_1019 iPseU_CNN:0.6512458;iRNA_PseU:0 1020 chr3 192973554 192973554 1 + T G HNSC 192973554 + 192973534 192973574 41 CCCTGTACTTGGGTGATGGTTACGTTATCAACATAGCACCT CCCTGTACTTGGGTGATGGTGACGTTATCAACATAGCACCT Direct Loss 0.929856386239282 0 0.85355186 0 prediction 0.859712772478565 Functional Loss - HRASLS ENSG00000127252 CDS Human protein_coding chr3:192973554 chr3:192973554 nonsynonymous SNV 0.985 3 21 hPsi_associated_SNPs_2979 0 0 0 0 1 Cytosol 0.438755720099339 0 0.70710372 0 hPsi_site_1020 iPseU_CNN:0.70710372;iRNA_PseU:0 1021 chr16 29394515 29394515 1 + T A rs574965324 29394515 + 29394495 29394535 41 ATGCTCGGCAGGTGTCTTGATATTATCATCTGCTGAGGGTG ATGCTCGGCAGGTGTCTTGAAATTATCATCTGCTGAGGGTG Direct Loss 0.92983266673753 0 0.55948156 0 prediction 0.859665333475059 Functional Loss - NPIPB11 ENSG00000254206 CDS Human protein_coding chr16:29394515 chr16:29394515 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_2980 0 0 0 0 0 nucleoplasm 0.438749582940135 0 0.11896312 0 hPsi_site_1021 iPseU_CNN:0.11896312;iRNA_PseU:0 1022 chr17 695062 695062 1 + T A rs80220493 695062 + 695042 695082 41 TTGGCTGCCTCATGTTGAGGTTCAGAGTTACGACTCGGACT TTGGCTGCCTCATGTTGAGGATCAGAGTTACGACTCGGACT Direct Loss 0.929819739913814 0 0.32442963 0 prediction 0.859639479827627 Functional Loss - MRM3 ENSG00000171861 CDS Human protein_coding chr17:695062 chr17:695062 nonsynonymous SNV 0.926 2 21 hPsi_associated_SNPs_2981 0 0 1 0 0 chromatin 0.438718778448025 0 0 0 hPsi_site_1022 iPseU_CNN:0;iRNA_PseU:0 1023 chr16 86601062 86601062 1 + T C LUAD 86601062 + 86601042 86601082 41 TGGCCAGCCCCATGGGCGTCTATTCCGGCCACCCGGAGCAG TGGCCAGCCCCATGGGCGTCCATTCCGGCCACCCGGAGCAG Direct Loss 0.929798021236186 0 0.67665005 0 prediction 0.859596042472372 Functional Loss - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86601062 chr16:86601062 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_2982 0 0 0 0 0 exosome 0.438938972713264 0 0.3533001 0 hPsi_site_1023 iPseU_CNN:0.3533001;iRNA_PseU:0 1024 chr20 11903534 11903534 1 + T C UCEC 11903534 + 11903514 11903554 41 AAGTCTGAGGGATTCTGCGATATTGACTTCCAGACACTAGA AAGTCTGAGGGATTCTGCGACATTGACTTCCAGACACTAGA Direct Loss 0.929791235847735 0 0.46700576 0 prediction 0.85958247169547 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903534 chr20:11903534 synonymous SNV . 0 21 hPsi_associated_SNPs_2983 0 0 1 0 0 Cytosol 0.438718390227626 0 0 0 hPsi_site_1024 iPseU_CNN:0;iRNA_PseU:0 1025 chr2 27315254 27315254 1 + T C LIHC 27315254 + 27315234 27315274 41 GCGTCCAACTCCTGCACCGTTCTCTCCCTGCTCGGAGCCCC GCGTCCAACTCCTGCACCGTCCTCTCCCTGCTCGGAGCCCC Direct Loss 0.929784945974304 0 0.8598778 0 prediction 0.859569891948607 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27315254 chr2:27315254 synonymous SNV . 0 21 hPsi_associated_SNPs_2984 0 0 1 0 2 Endoplasmic reticulum 0.438718592995102 0 0.7197556 0 hPsi_site_1025 iPseU_CNN:0.7197556;iRNA_PseU:0 1026 chr3 52014496 52014496 1 + T C STAD 52014496 + 52014476 52014516 41 GGCGCTGCGGGACCTGGAGGTACAGAATGCCGTGTTGGTGA GGCGCTGCGGGACCTGGAGGCACAGAATGCCGTGTTGGTGA Direct Loss 0.929756574552033 0 0.8770176 0 prediction 0.859513149104066 Functional Loss - ABHD14A ENSG00000248487 CDS Human protein_coding chr3:52014496 chr3:52014496 nonsynonymous SNV 0.965 1 21 hPsi_associated_SNPs_2985 0 0 0 0 1 Ribosome 0.438718775594906 0 0.7540352 0 hPsi_site_1026 iPseU_CNN:0.7540352;iRNA_PseU:0 1027 chr17 58740414 58740414 1 + T C STAD 58740414 + 58740394 58740434 41 GGACCATATACCTGCCCTGGTTCGTAGCAATGCCTTCTCAG GGACCATATACCTGCCCTGGCTCGTAGCAATGCCTTCTCAG Direct Loss 0.929670824863439 0 0.33212128 0 prediction 0.859341649726879 Functional Loss - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58740414 chr17:58740414 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_2986 0 0 0 1 1 Cytosol 0.438718591357639 0 0 0 hPsi_site_1027 iPseU_CNN:0;iRNA_PseU:0 1028 chr11 6414510 6414510 1 + T G UCEC 6414510 + 6414490 6414530 41 TCATCTCTCTCAATATGAATTTTTGTTCCCGTGAGAACTTC TCATCTCTCTCAATATGAATGTTTGTTCCCGTGAGAACTTC Direct Loss 0.929639704397111 0 0.5427636 0 prediction 0.859279408794221 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6414510 chr11:6414510 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2987 0 0 1 0 1 Endoplasmic reticulum 0.438718589966673 0 0.0855272 0 hPsi_site_1028 iPseU_CNN:0.0855272;iRNA_PseU:0 1029 chr19 58005062 58005062 1 + T G COAD 58005062 + 58005042 58005082 41 TGCAGCGACTGTGGGAAATTTTTTACCCAATGCTCAAGCCT TGCAGCGACTGTGGGAAATTGTTTACCCAATGCTCAAGCCT Direct Loss 0.929611426783345 0 0.36063 0 prediction 0.85922285356669 Functional Loss - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58005062 chr19:58005062 nonsynonymous SNV 0.072 2 21 hPsi_associated_SNPs_2988 0 0 1 0 0 exosome 0.43871841295892 0 0 0 hPsi_site_1029 iPseU_CNN:0;iRNA_PseU:0 1030 chr16 2011195 2011195 1 + T C BLCA 2011195 + 2011175 2011215 41 CAAAGAACAGGTATTACTACTACCACCGGCAGTACCGCCGC CAAAGAACAGGTATTACTACCACCACCGGCAGTACCGCCGC Direct Loss 0.929564411772974 0 0.36461145 0 prediction 0.859128823545949 Functional Loss - NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011195 chr16:2011195 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_2989 0 0 1 0 2 Ribosome 0.438736308225622 0 0 0 hPsi_site_1030 iPseU_CNN:0;iRNA_PseU:0 1031 chr5 98129295 98129295 1 + T A LUSC 98129295 + 98129275 98129315 41 ACCACTGGTGATGCCAACTTTACTGCCGCAGCCCACAGTGC ACCACTGGTGATGCCAACTTAACTGCCGCAGCCCACAGTGC Direct Loss 0.929514693485627 0 0.49736866 0 prediction 0.859029386971253 Functional Loss - RGMB ENSG00000174136 CDS Human protein_coding chr5:98129295 chr5:98129295 nonsynonymous SNV 0.742 5 21 hPsi_associated_SNPs_2990 0 0 1 0 0 nucleus 0.439037263152864 0 0 0 hPsi_site_1031 iPseU_CNN:0;iRNA_PseU:0 1032 chr15 34355303 34355303 1 + T C LGG 34355303 + 34355283 34355323 41 TGGTGATCAGTTTTGACCGTTACTTTTCCATCACAAGACCC TGGTGATCAGTTTTGACCGTCACTTTTCCATCACAAGACCC Direct Loss 0.92950698737495 0 0.8234327 0 prediction 0.859013974749899 Functional Loss - CHRM5 ENSG00000184984 CDS Human protein_coding chr15:34355303 chr15:34355303 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_2991 0 0 0 0 0 cytosol 0.438718592991248 0 0.6468654 0 hPsi_site_1032 iPseU_CNN:0.6468654;iRNA_PseU:0 1033 chr1 248685722 248685722 1 + T C CESC 248685722 + 248685702 248685742 41 ATGGGACCATCATATTCATGTACCTTCAACCGGCCAATAGG ATGGGACCATCATATTCATGCACCTTCAACCGGCCAATAGG Direct Loss 0.92950583802794 0 0.47015682 0 prediction 0.85901167605588 Functional Loss - OR2G6 ENSG00000188558 CDS Human protein_coding chr1:248685722 chr1:248685722 nonsynonymous SNV 0.992 3 21 hPsi_associated_SNPs_2992 0 0 0 0 0 unknown 0.438718592953489 0 0 0 hPsi_site_1033 iPseU_CNN:0;iRNA_PseU:0 1034 chr12 52471038 52471038 1 + T A rs1283163 52471038 + 52471018 52471058 41 TGGCTTTTGGGAATTGCACTTTTGGGCCTTTGGGCTCTGGA TGGCTTTTGGGAATTGCACTATTGGGCCTTTGGGCTCTGGA Direct Loss 0.929476702924952 0 0.41659912 0 prediction 0.858953405849904 Functional Loss - ATG101 ENSG00000257663 ncRNA_exonic Human antisense chr12:52471038 chr12:52471038 . . 0 21 hPsi_associated_SNPs_2993 0 0 1 12 0 Ribosome 0.438718583721357 0 0 0 hPsi_site_1034 iPseU_CNN:0;iRNA_PseU:0 1035 chr1 155582721 155582721 1 + T G UCEC 155582721 + 155582701 155582741 41 CGCCTGTGTTCCTCTCCAGTTTCCATGGTTCATCTGGCTGA CGCCTGTGTTCCTCTCCAGTGTCCATGGTTCATCTGGCTGA Direct Loss 0.929444709034546 0 0.54508805 0 prediction 0.858889418069091 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582721 chr1:155582721 synonymous SNV . 0 21 hPsi_associated_SNPs_2994 0 0 0 0 2 Ribosome 0.438749828081956 0 0.0901761000000001 0 hPsi_site_1035 iPseU_CNN:0.0901761000000001;iRNA_PseU:0 1036 chr19 50309005 50309005 1 + T C GBM 50309005 + 50308985 50309025 41 ACCGAGATGGCGGCCCAGGATTTCTTCCAGCGCTGGAAGCA ACCGAGATGGCGGCCCAGGACTTCTTCCAGCGCTGGAAGCA Direct Loss 0.929435234321342 0 0.65199316 0 prediction 0.858870468642685 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50309005 chr19:50309005 synonymous SNV . 0 21 hPsi_associated_SNPs_2995 0 0 1 0 3 Ribosome 0.438700351676022 0 0.30398632 0 hPsi_site_1036 iPseU_CNN:0.30398632;iRNA_PseU:0 1037 chr9 107550287 107550287 1 + T G LUAD 107550287 + 107550267 107550307 41 ACTATAGTTACCAGCATATTTTTCTCCATACTTCACGAGGC ACTATAGTTACCAGCATATTGTTCTCCATACTTCACGAGGC Direct Loss 0.929393862066135 0 0.7114321 0 prediction 0.858787724132269 Functional Loss - ABCA1 ENSG00000165029 CDS Human protein_coding chr9:107550287 chr9:107550287 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_2996 0 0 0 0 0 cytosol 0.43871865958618 0 0.4228642 0 hPsi_site_1037 iPseU_CNN:0.4228642;iRNA_PseU:0 1038 chr3 98251271 98251271 1 + T A GBM 98251271 + 98251251 98251291 41 CTTGCATGAGTGTTGACCGCTACCTGGCCATTGTGTGGCCA CTTGCATGAGTGTTGACCGCAACCTGGCCATTGTGTGGCCA Direct Loss 0.929281636224085 0 0.7814834 0 prediction 0.858563272448171 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251271 chr3:98251271 nonsynonymous SNV 0.962 5 21 hPsi_associated_SNPs_2997 0 0 0 0 0 exosome 0.438717931786441 0 0.5629668 0 hPsi_site_1038 iPseU_CNN:0.5629668;iRNA_PseU:0 1039 chr12 7069334 7069334 1 + T C STAD 7069334 + 7069314 7069354 41 TGGTGCAGACGGAGGCGCAGTACAAGTTCATCTACGTGGCC TGGTGCAGACGGAGGCGCAGCACAAGTTCATCTACGTGGCC Direct Loss 0.929274345611994 0 0.86971956 0 prediction 0.858548691223988 Functional Loss - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7069334 chr12:7069334 nonsynonymous SNV 0.994 5 21 hPsi_associated_SNPs_2998 0 0 0 0 2 chromatin 0.438728542273389 0 0.73943912 0 hPsi_site_1039 iPseU_CNN:0.73943912;iRNA_PseU:0 1040 chr19 56206633 56206633 1 + T C COAD 56206633 + 56206613 56206653 41 TCCCTGGAGCGCCACCCACGTACATCTCTCCCCTTGGCGGG TCCCTGGAGCGCCACCCACGCACATCTCTCCCCTTGGCGGG Direct Loss 0.929264939718311 0 0.9405769 0 prediction 0.858529879436621 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56206633 chr19:56206633 nonsynonymous SNV 0.501 0 21 hPsi_associated_SNPs_2999 0 0 1 0 0 chromatin 0.438719225362929 0 0.8811538 0 hPsi_site_1040 iPseU_CNN:0.8811538;iRNA_PseU:0 1041 chrX 118893137 118893137 1 + T C rs2782224 118893137 + 118893117 118893157 41 GAGCTCATTCTGGTACACGATTTCGCCCTACGCCGGGGGCT GAGCTCATTCTGGTACACGACTTCGCCCTACGCCGGGGGCT Direct Loss 0.929220916925541 0 0.7504885 0 prediction 0.858441833851083 Functional Loss - SOWAHD ENSG00000187808 CDS Human protein_coding chrX:118893137 chrX:118893137 synonymous SNV . 0 21 hPsi_associated_SNPs_3000 0 0 0 0 0 exosome 0.430271885969641 0 0.500977 0 hPsi_site_1041 iPseU_CNN:0.500977;iRNA_PseU:0 1042 chr20 16729544 16729544 1 + T A LUAD 16729544 + 16729524 16729564 41 TGGCTAGTGCTCAAGAAGATTATAATGCCCCGGACTGTAGA TGGCTAGTGCTCAAGAAGATAATAATGCCCCGGACTGTAGA Direct Loss 0.929208799676174 0 0.5221423 0 prediction 0.858417599352349 Functional Loss - OTOR ENSG00000125879 CDS Human protein_coding chr20:16729544 chr20:16729544 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_3001 0 0 0 0 1 unknown 0.438720644084528 0 0.0442845999999999 0 hPsi_site_1042 iPseU_CNN:0.0442845999999999;iRNA_PseU:0 1043 chr1 107973407 107973407 1 + T C COAD 107973407 + 107973387 107973427 41 GCCACTCCAATCGATGCAGTTATATCGATCTGCTAAATACA GCCACTCCAATCGATGCAGTCATATCGATCTGCTAAATACA Direct Loss 0.929195816055444 0 0.7190584 0 prediction 0.858391632110888 Functional Loss - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107973407 chr1:107973407 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_3002 0 0 0 2 1 exosome 0.438601626577214 0 0.4381168 0 hPsi_site_1043 iPseU_CNN:0.4381168;iRNA_PseU:0 1044 chr3 32995674 32995674 1 + T C UCEC 32995674 + 32995654 32995694 41 TGGTGGTCCTCTTCCTTGGGTTCTGGACACCTTACAACATA TGGTGGTCCTCTTCCTTGGGCTCTGGACACCTTACAACATA Direct Loss 0.929187253177133 0 0.5158899 0 prediction 0.858374506354266 Functional Loss - CCR4 ENSG00000183813 CDS Human protein_coding chr3:32995674 chr3:32995674 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_3003 0 0 0 0 0 exosome 0.438718438934337 0 0.0317798 0 hPsi_site_1044 iPseU_CNN:0.0317798;iRNA_PseU:0 1045 chr1 150463921 150463921 1 + T A COAD 150463921 + 150463901 150463941 41 GAGCGGATTTGCCAGGAACTTACAGCTGCTGCTCGACCCTT GAGCGGATTTGCCAGGAACTAACAGCTGCTGCTCGACCCTT Direct Loss 0.929184030610679 0 0.3491189 0 prediction 0.858368061221357 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150463921 chr1:150463921 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_3004 0 0 1 6 2 Ribosome 0.438738554567512 0 0 0 hPsi_site_1045 iPseU_CNN:0;iRNA_PseU:0 1046 chr7 74202989 74202989 1 + T C UCEC 74202989 + 74202969 74203009 41 TCGCCGCAACAGCGTCCGTTTTCTGCAGCAGCGACGCCGCC TCGCCGCAACAGCGTCCGTTCTCTGCAGCAGCGACGCCGCC Direct Loss 0.929172379178581 0 0.85393965 0 prediction 0.858344758357162 Functional Loss - NCF1 ENSG00000158517 CDS Human protein_coding chr7:74202989 chr7:74202989 nonsynonymous SNV 0.553 0 21 hPsi_associated_SNPs_3005 0 0 0 0 2 exosome 0.438728012062085 0 0.7078793 0 hPsi_site_1046 iPseU_CNN:0.7078793;iRNA_PseU:0 1047 chr19 15905493 15905493 1 + T C UCEC 15905493 + 15905473 15905513 41 CACGGCCCTGCTGGGCTGTTTTCTCCTCATCCTCCTCTCCT CACGGCCCTGCTGGGCTGTTCTCTCCTCATCCTCCTCTCCT Direct Loss 0.929165476693238 0 0.40341032 0 prediction 0.858330953386476 Functional Loss - OR10H5 ENSG00000172519 CDS Human protein_coding chr19:15905493 chr19:15905493 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_3006 0 0 0 0 0 unknown 0.438724824338971 0 0 0 hPsi_site_1047 iPseU_CNN:0;iRNA_PseU:0 1048 chr9 130922590 130922590 1 + T G rs575047861 130922590 + 130922570 130922610 41 TCTACCCTTCCGGCCCGTGTTCTATCCGCCGCCTCCACCTT TCTACCCTTCCGGCCCGTGTGCTATCCGCCGCCTCCACCTT Direct Loss 0.92912995608569 0 0.890031 0 prediction 0.858259912171381 Functional Loss - C9orf16 ENSG00000171159 UTR5 Human protein_coding chr9:130922590 chr9:130922590 . . 0 21 hPsi_associated_SNPs_3007 0 0 1 0 0 Cytosol 0.438718791806277 0 0.780062 0 hPsi_site_1048 iPseU_CNN:0.780062;iRNA_PseU:0 1049 chr5 52780882 52780882 1 + T C LIHC 52780882 + 52780862 52780902 41 GGGAAAAAATGTTTATGGGATTTCAAGGTTGGGAGAGGCCG GGGAAAAAATGTTTATGGGACTTCAAGGTTGGGAGAGGCCG Direct Loss 0.929129515239027 0 0.34855556 0 prediction 0.858259030478054 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52780882 chr5:52780882 synonymous SNV . 0 21 hPsi_associated_SNPs_3008 0 0 1 0 1 nucleus 0.438718594975424 0 0 0 hPsi_site_1049 iPseU_CNN:0;iRNA_PseU:0 1050 chr22 21330564 21330564 1 + T C OV 21330564 + 21330544 21330584 41 AGGATGGCTTCAAGCTGGAGTACAGCAAGCTGCTGCTGGCA AGGATGGCTTCAAGCTGGAGCACAGCAAGCTGCTGCTGGCA Direct Loss 0.929073342387027 0 0.45830607 0 prediction 0.858146684774054 Functional Loss - AIFM3 ENSG00000183773 CDS Human protein_coding chr22:21330564 chr22:21330564 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_3009 0 0 0 0 2 exosome 0.438904280082325 0 0 0 hPsi_site_1050 iPseU_CNN:0;iRNA_PseU:0 1051 chr17 36891012 36891012 1 + A G rs546524179 36891012 - 36890992 36891032 41 AGTCAGTTAGAATCGTTTCTTTCTCTCCCCGTTTCTCTCCC AGTCAGTTAGAATCGTTTCTCTCTCTCCCCGTTTCTCTCCC Direct Loss 0.928996279214889 0 0.6138648 0 prediction 0.857992558429778 Functional Loss - CISD3;PCGF2 ENSG00000056661;ENSG00000230055 UTR3 Human other chr17:36891012 chr17:36891012 . . 0 21 hPsi_associated_SNPs_3010 0 0 0 2 0 unknown 0.438718592893328 0 0.2277296 0 hPsi_site_1051 iPseU_CNN:0.2277296;iRNA_PseU:0 1052 chr9 131004580 131004580 1 + T G UCEC 131004580 + 131004560 131004600 41 GGGGCTCCAAGGAGTACTGGTTTGTGCTGACTGCTGAGAAT GGGGCTCCAAGGAGTACTGGGTTGTGCTGACTGCTGAGAAT Direct Loss 0.928916614393943 0 0.27449167 0 prediction 0.857833228787885 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131004580 chr9:131004580 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_3011 0 0 1 3 2 Endoplasmic reticulum 0.438718592873195 0 0 0 hPsi_site_1052 iPseU_CNN:0;iRNA_PseU:0 1053 chr16 89789074 89789074 1 + T C COAD 89789074 + 89789054 89789094 41 CGCAGAGGAGCGCGTGCTCGTACGGGACTTCCAGCGCCTGC CGCAGAGGAGCGCGTGCTCGCACGGGACTTCCAGCGCCTGC Direct Loss 0.928896402049896 0 0.9318595 0 prediction 0.857792804099792 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789074 chr16:89789074 nonsynonymous SNV 0.090 0 21 hPsi_associated_SNPs_3012 0 0 1 0 0 Nucleus 0.43870637733129 0 0.863719 0 hPsi_site_1053 iPseU_CNN:0.863719;iRNA_PseU:0 1054 chr17 16335393 16335393 1 + T G UCEC 16335393 + 16335373 16335413 41 ACGAGGGCAACGGGGCCCAGTACAGGGGTATCCTGGAAGCC ACGAGGGCAACGGGGCCCAGGACAGGGGTATCCTGGAAGCC Direct Loss 0.928868451573076 0 0.7400335 0 prediction 0.857736903146153 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335393 chr17:16335393 nonsynonymous SNV 0.003 5 21 hPsi_associated_SNPs_3013 0 0 1 0 0 Endoplasmic reticulum 0.438718592840973 0 0.480067 0 hPsi_site_1054 iPseU_CNN:0.480067;iRNA_PseU:0 1055 chr15 68118328 68118328 1 + T C SKCM 68118328 + 68118308 68118348 41 GGGCCGGGGCGCGAGGGCAGTTCCTCGCCCAACTCCAAGCA GGGCCGGGGCGCGAGGGCAGCTCCTCGCCCAACTCCAAGCA Direct Loss 0.928730859475814 0 0.5791471 0 prediction 0.857461718951627 Functional Loss - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68118328 chr15:68118328 synonymous SNV . 0 21 hPsi_associated_SNPs_3014 0 0 0 0 1 exosome 0.438715237152339 0 0.1582942 0 hPsi_site_1055 iPseU_CNN:0.1582942;iRNA_PseU:0 1056 chr19 1106623 1106623 1 + T C rs370996243 1106623 + 1106603 1106643 41 TGCCCACGCCCTTGGAGCCTTCCACCGGCACTCATGACGGC TGCCCACGCCCTTGGAGCCTCCCACCGGCACTCATGACGGC Direct Loss 0.928727691502524 0 0.23250476 0 prediction 0.857455383005048 Functional Loss - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1106623 chr19:1106623 nonsynonymous SNV 0.143 0 21 hPsi_associated_SNPs_3015 0 0 1 0 1 Cytosol 0.438816084366061 0 0 0 hPsi_site_1056 iPseU_CNN:0;iRNA_PseU:0 1057 chr1 180167644 180167644 1 + T C rs7544147 180167644 + 180167624 180167664 41 GAGCCTCAATCCGATTTGGTTTTCTCTTTGACATCTTCACT GAGCCTCAATCCGATTTGGTCTTCTCTTTGACATCTTCACT Direct Loss 0.92870819679241 0 0.5341576 0 prediction 0.85741639358482 Functional Loss - FLJ23867 ENSG00000116260 UTR3 Human protein_coding chr1:180167644 chr1:180167644 . . 0 21 hPsi_associated_SNPs_3016 0 0 0 1 0 unknown 0.438747408274566 0 0.0683152 0 hPsi_site_1057 iPseU_CNN:0.0683152;iRNA_PseU:0 1058 chr18 7231390 7231390 1 + T G STAD 7231390 + 7231370 7231410 41 GTCTCACAACCAGCTCCGGGTTCTCCCTCCCGAGGTGGGGA GTCTCACAACCAGCTCCGGGGTCTCCCTCCCGAGGTGGGGA Direct Loss 0.928701462436333 0 0.3747327 0 prediction 0.857402924872666 Functional Loss - LRRC30 ENSG00000206422 CDS Human protein_coding chr18:7231390 chr18:7231390 nonsynonymous SNV 0.054 0 21 hPsi_associated_SNPs_3017 0 0 0 0 0 unknown 0.438725292435864 0 0 0 hPsi_site_1058 iPseU_CNN:0;iRNA_PseU:0 1059 chr8 42401651 42401651 1 + T C GBM 42401651 + 42401631 42401671 41 GGAGTGATGGGTGACGATGGTTCTATTGATTATACTGTTCA GGAGTGATGGGTGACGATGGCTCTATTGATTATACTGTTCA Direct Loss 0.928658737519947 0 0.17043418 0 prediction 0.857317475039894 Functional Loss - SMIM19 ENSG00000176209 CDS Human protein_coding chr8:42401651 chr8:42401651 synonymous SNV . 0 21 hPsi_associated_SNPs_3018 0 0 1 0 2 Ribosome 0.438716890085845 0 0 0 hPsi_site_1059 iPseU_CNN:0;iRNA_PseU:0 1060 chr10 127436201 127436201 1 + T G HNSC 127436201 + 127436181 127436221 41 ACTGGGAATTGTCCACTACTTACTTTACTATGGCAACTCTA ACTGGGAATTGTCCACTACTGACTTTACTATGGCAACTCTA Direct Loss 0.928621600405968 0 0.7697231 0 prediction 0.857243200811936 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127436201 chr10:127436201 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_3019 0 0 1 0 2 Cytosol 0.43871859394256 0 0.5394462 0 hPsi_site_1060 iPseU_CNN:0.5394462;iRNA_PseU:0 1061 chr1 147097255 147097255 1 + T C rs115164084 147097255 + 147097235 147097275 41 GAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTTCA GAATGCTGGGCTGTTTACTTCAGGTGGAGAATCCATCTTCA Direct Loss 0.928619574895645 0 0.6912847 0 prediction 0.857239149791289 Functional Loss - BCL9 ENSG00000116128 UTR3 Human protein_coding chr1:147097255 chr1:147097255 . . 0 21 hPsi_associated_SNPs_3020 0 0 1 0 0 Nucleus 0.437840299472194 0 0.3825694 0 hPsi_site_1061 iPseU_CNN:0.3825694;iRNA_PseU:0 1062 chr17 73262002 73262002 1 + T C UCEC 73262002 + 73261982 73262022 41 TGGCCCACTACCGCTGGTGGTAGAGTCTCCAGGAGGAGCCC TGGCCCACTACCGCTGGTGGCAGAGTCTCCAGGAGGAGCCC Direct Loss 0.928604883820353 0 0.6256348 0 prediction 0.857209767640707 Functional Loss - MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73262002 chr17:73262002 stoploss 0.946 0 21 hPsi_associated_SNPs_3021 0 0 1 0 0 Ribosome 0.4387185929951 0 0.2512696 0 hPsi_site_1062 iPseU_CNN:0.2512696;iRNA_PseU:0 1063 chrX 106847114 106847114 1 + T C rs12006998 106847114 + 106847094 106847134 41 TTGGGCTCACACTCACCTGGTAGATGCCACCCTGAGGGCCT TTGGGCTCACACTCACCTGGCAGATGCCACCCTGAGGGCCT Direct Loss 0.928593559936946 0 0.7022089 0 prediction 0.857187119873893 Functional Loss - FRMPD3 ENSG00000147234 UTR3 Human protein_coding chrX:106847114 chrX:106847114 . . 0 21 hPsi_associated_SNPs_3022 0 0 0 0 0 exosome 0.438718552674654 0 0.4044178 0 hPsi_site_1063 iPseU_CNN:0.4044178;iRNA_PseU:0 1064 chr16 55525805 55525805 1 + T A LUAD 55525805 + 55525785 55525825 41 GGGCCCTGATGGCACCCATTTACACCTACACCAAGAACTTC GGGCCCTGATGGCACCCATTAACACCTACACCAAGAACTTC Direct Loss 0.928491971123907 0 0.73641 0 prediction 0.856983942247813 Functional Loss - MMP2 ENSG00000087245 CDS Human protein_coding chr16:55525805 chr16:55525805 nonsynonymous SNV 0.977 4 21 hPsi_associated_SNPs_3023 0 0 0 0 1 Endoplasmic reticulum 0.438682926407992 0 0.47282 0 hPsi_site_1064 iPseU_CNN:0.47282;iRNA_PseU:0 1065 chr5 78050876 78050876 1 + T A rs148756719 78050876 + 78050856 78050896 41 TAAAAGAAATAAGTCCTAGATAGCTTTCCCTCCAAGTCATC TAAAAGAAATAAGTCCTAGAAAGCTTTCCCTCCAAGTCATC Direct Loss 0.928488474477527 0 0.29969066 0 prediction 0.856976948955053 Functional Loss - LHFPL2;ARSB ENSG00000254310;ENSG00000113273 intergenic Human other chr5:78050876 chr5:78050876 . . 0 21 hPsi_associated_SNPs_3024 0 0 0 0 0 unknown 0.438718592995108 0 0 0 hPsi_site_1065 iPseU_CNN:0;iRNA_PseU:0 1066 chr3 47284680 47284680 1 + A G GBM 47284680 - 47284660 47284700 41 TGAATGGGAAGGACTTGGATTACGTTTCCACCTCCAAGACC TGAATGGGAAGGACTTGGATCACGTTTCCACCTCCAAGACC Direct Loss 0.928481866748941 0 0.63066864 0 prediction 0.856963733497882 Functional Loss - KIF9 ENSG00000088727 CDS Human protein_coding chr3:47284680 chr3:47284680 nonsynonymous SNV 0.064 0 21 hPsi_associated_SNPs_3025 0 0 0 0 1 Ribosome 0.438718592995102 0 0.26133728 0 hPsi_site_1066 iPseU_CNN:0.26133728;iRNA_PseU:0 1067 chr9 35609590 35609590 1 + T G STAD 35609590 + 35609570 35609610 41 GCTGCCTCGGCCCCTTCAGCTTTGGCTTCCTGTCCATGTGC GCTGCCTCGGCCCCTTCAGCGTTGGCTTCCTGTCCATGTGC Direct Loss 0.928476380421107 0 0.5026257 0 prediction 0.856952760842213 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35609590 chr9:35609590 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_3026 0 0 0 0 0 Cytosol 0.43871857549505 0 0.00525139999999991 0 hPsi_site_1067 iPseU_CNN:0.00525139999999991;iRNA_PseU:0 1068 chr15 80215300 80215300 1 + T C rs2733102 80215300 + 80215280 80215320 41 AGAAGGAGCTACAAGCCCTGTACTTGCAAGCCTCGAACCCC AGAAGGAGCTACAAGCCCTGCACTTGCAAGCCTCGAACCCC Direct Loss 0.928469199008678 0 0.7423007 0 prediction 0.856938398017355 Functional Loss - ST20-AS1 ENSG00000259642 CDS Human antisense chr15:80215300 chr15:80215300 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_3027 0 0 0 0 0 unknown 0.438718591335273 0 0.4846014 0 hPsi_site_1068 iPseU_CNN:0.4846014;iRNA_PseU:0 1069 chr16 27459937 27459937 1 + A G LUAD 27459937 - 27459917 27459957 41 TCCGTGGTGGGTGGCAGCTGTACACCTCCAGGGTGGAGGGC TCCGTGGTGGGTGGCAGCTGCACACCTCCAGGGTGGAGGGC Direct Loss 0.928424279893411 0 0.8126385 0 prediction 0.856848559786823 Functional Loss - IL21R ENSG00000103522 CDS Human protein_coding chr16:27459937 chr16:27459937 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_3028 0 0 1 0 0 nucleus 0.438711097857989 0 0.625277 0 hPsi_site_1069 iPseU_CNN:0.625277;iRNA_PseU:0 1070 chr17 62081042 62081042 1 + A T SKCM 62081042 - 62081022 62081062 41 GTCTCGCGGTGGCAACATCTTTCACAAACACTCAGCCCCGA GTCTCGCGGTGGCAACATCTATCACAAACACTCAGCCCCGA Direct Loss 0.928420512563154 0 0.66324985 0 prediction 0.856841025126309 Functional Loss - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62081042 chr17:62081042 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_3029 0 0 1 0 1 Endoplasmic reticulum 0.444561014282707 0 0.3264997 0 hPsi_site_1070 iPseU_CNN:0.3264997;iRNA_PseU:0 1071 chr8 23147512 23147512 1 + T C UCEC 23147512 + 23147492 23147532 41 GTGCCCGGGCTGGCCGGTGGTATCGTGGACGCAAGCCTGAC GTGCCCGGGCTGGCCGGTGGCATCGTGGACGCAAGCCTGAC Direct Loss 0.928381647436972 0 0.8251546 0 prediction 0.856763294873944 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147512 chr8:23147512 nonsynonymous SNV 0.882 0 21 hPsi_associated_SNPs_3030 0 0 1 0 0 Cytosol 0.438667166762581 0 0.6503092 0 hPsi_site_1071 iPseU_CNN:0.6503092;iRNA_PseU:0 1072 chr22 41077411 41077411 1 + T C STAD 41077411 + 41077391 41077431 41 GCATCACCCCTGTGTGGCTGTATGCCAGACTCATCCCCTTC GCATCACCCCTGTGTGGCTGCATGCCAGACTCATCCCCTTC Direct Loss 0.928368933550203 0 0.6166982 0 prediction 0.856737867100407 Functional Loss - MCHR1 ENSG00000128285 CDS Human protein_coding chr22:41077411 chr22:41077411 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_3031 0 0 0 0 0 exosome 0.431002283319791 0 0.2333964 0 hPsi_site_1072 iPseU_CNN:0.2333964;iRNA_PseU:0 1073 chr16 2881957 2881957 1 + T A LUAD 2881957 + 2881937 2881977 41 TGTACACCAGCAAGGACCGCTATTTCTATTTTGGGAAGCTT TGTACACCAGCAAGGACCGCAATTTCTATTTTGGGAAGCTT Direct Loss 0.928364463706905 0 0.44248766 0 prediction 0.85672892741381 Functional Loss - ZG16B ENSG00000162078 CDS Human protein_coding chr16:2881957 chr16:2881957 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_3032 0 0 0 0 0 exosome 0.43872102369744 0 0 0 hPsi_site_1073 iPseU_CNN:0;iRNA_PseU:0 1074 chr5 64875302 64875302 1 + T C COAD 64875302 + 64875282 64875322 41 ATTAGAGTGATGCAATTGGCTTTGTTCCAGGGGATAGCCAA ATTAGAGTGATGCAATTGGCCTTGTTCCAGGGGATAGCCAA Direct Loss 0.928333358048201 0 0.347158 0 prediction 0.856666716096401 Functional Loss - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64875302 chr5:64875302 synonymous SNV . 0 21 hPsi_associated_SNPs_3033 0 0 1 0 1 chromatin 0.43871406927798 0 0 0 hPsi_site_1074 iPseU_CNN:0;iRNA_PseU:0 1075 chr4 56277916 56277916 1 + T G COAD 56277916 + 56277896 56277936 41 AATTGGGTGATAAGACATTTTTTATAGCAGCCATCATGGCA AATTGGGTGATAAGACATTTGTTATAGCAGCCATCATGGCA Direct Loss 0.928331545435125 0 0.41396266 0 prediction 0.856663090870249 Functional Loss - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56277916 chr4:56277916 nonsynonymous SNV 0.991 5 21 hPsi_associated_SNPs_3034 0 0 1 0 1 Ribosome 0.438550085966742 0 0 0 hPsi_site_1075 iPseU_CNN:0;iRNA_PseU:0 1076 chr13 24466094 24466094 1 + T C HNSC 24466094 + 24466074 24466114 41 CCAGTCTCTCCTCGGAGGCCTTTCTCTCCCATGGGCCCTGC CCAGTCTCTCCTCGGAGGCCCTTCTCTCCCATGGGCCCTGC Direct Loss 0.928276405335257 0 0.52655643 0 prediction 0.856552810670515 Functional Loss - C1QTNF9B ENSG00000205863 CDS Human protein_coding chr13:24466094 chr13:24466094 synonymous SNV . 0 21 hPsi_associated_SNPs_3035 0 0 1 1 0 exosome 0.438718592995431 0 0.0531128599999999 0 hPsi_site_1076 iPseU_CNN:0.0531128599999999;iRNA_PseU:0 1077 chr17 2226993 2226993 1 + A G STAD 2226993 - 2226973 2227013 41 ACTCCAACACCAGCTGTAGGTTCAATGAGTAGTTTCATCCT ACTCCAACACCAGCTGTAGGCTCAATGAGTAGTTTCATCCT Direct Loss 0.928265903104333 0 0.60091716 0 prediction 0.856531806208666 Functional Loss - SRR ENSG00000167720 CDS Human protein_coding chr17:2226993 chr17:2226993 synonymous SNV . 0 21 hPsi_associated_SNPs_3036 0 0 1 1 0 Cytosol 0.438718939705505 0 0.20183432 0 hPsi_site_1077 iPseU_CNN:0.20183432;iRNA_PseU:0 1078 chr11 64884693 64884693 1 + T G PRAD 64884693 + 64884673 64884713 41 GGCGTCACTACCCGGGGCATTATCCAGCTCCTCCAGAAGCT GGCGTCACTACCCGGGGCATGATCCAGCTCCTCCAGAAGCT Direct Loss 0.928258612402101 0 0.6050036 0 prediction 0.856517224804202 Functional Loss - ZNHIT2 ENSG00000174276 CDS Human protein_coding chr11:64884693 chr11:64884693 nonsynonymous SNV 0.079 0 21 hPsi_associated_SNPs_3037 0 0 1 0 0 Ribosome 0.438754317629147 0 0.2100072 0 hPsi_site_1078 iPseU_CNN:0.2100072;iRNA_PseU:0 1079 chr6 26217493 26217493 1 + T G PAAD 26217493 + 26217473 26217513 41 GACGAGGAGCTAAATAAGCTTCTAGGTCGCGTGACCATCGC GACGAGGAGCTAAATAAGCTGCTAGGTCGCGTGACCATCGC Direct Loss 0.928226629008394 0 0.61110693 0 prediction 0.856453258016789 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217493 chr6:26217493 synonymous SNV . 0 21 hPsi_associated_SNPs_3038 0 0 1 0 0 Nucleus 0.438712205974654 0 0.22221386 0 hPsi_site_1079 iPseU_CNN:0.22221386;iRNA_PseU:0 1080 chr1 42922486 42922486 1 + T C UCEC 42922486 + 42922466 42922506 41 GCTACGGGGTCCTGTTCTTGTATCGCGCTCGCTCTGCCTTC GCTACGGGGTCCTGTTCTTGCATCGCGCTCGCTCTGCCTTC Direct Loss 0.928193563729478 0 0.64669466 0 prediction 0.856387127458957 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42922486 chr1:42922486 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_3039 0 0 1 0 0 Ribosome 0.438718063334896 0 0.29338932 0 hPsi_site_1080 iPseU_CNN:0.29338932;iRNA_PseU:0 1081 chr3 49211729 49211729 1 + T C UCEC 49211729 + 49211709 49211749 41 CACGGCCCCCCAGGCCCAGGTACGTGTGTATGAGCCCCGTC CACGGCCCCCCAGGCCCAGGCACGTGTGTATGAGCCCCGTC Direct Loss 0.9281655907736 0 0.8923595 0 prediction 0.8563311815472 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49211729 chr3:49211729 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_3040 0 0 1 0 0 Cytosol 0.43871583854745 0 0.784719 0 hPsi_site_1081 iPseU_CNN:0.784719;iRNA_PseU:0 1082 chr19 1433787 1433787 1 + T C UCEC 1433787 + 1433767 1433807 41 GGCTGCGGCCCACACTTTGTTTACAGTCTTATGGTCAGGCT GGCTGCGGCCCACACTTTGTCTACAGTCTTATGGTCAGGCT Direct Loss 0.928062312856082 0 0.29048592 0 prediction 0.856124625712164 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1433787 chr19:1433787 synonymous SNV . 0 21 hPsi_associated_SNPs_3041 0 0 1 0 2 chromatin 0.43871859299532 0 0 0 hPsi_site_1082 iPseU_CNN:0;iRNA_PseU:0 1083 chr3 15300360 15300360 1 + T C CESC 15300360 + 15300340 15300380 41 GAAATGGCATCAGGCTCAGGTTTGCTCCCTGGCAGATCCTC GAAATGGCATCAGGCTCAGGCTTGCTCCCTGGCAGATCCTC Direct Loss 0.928031769625706 0 0.63291407 0 prediction 0.856063539251411 Functional Loss - SH3BP5 ENSG00000131370 CDS Human protein_coding chr3:15300360 chr3:15300360 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_3042 0 0 1 0 0 Ribosome 0.438718558246132 0 0.26582814 0 hPsi_site_1083 iPseU_CNN:0.26582814;iRNA_PseU:0 1084 chr19 48427151 48427151 1 + T A rs530683932 48427151 + 48427131 48427171 41 ATGGGTCGGAAAAAAGGATTTTTTTTATCGTTCCCAATATA ATGGGTCGGAAAAAAGGATTATTTTTATCGTTCCCAATATA Direct Loss 0.928025653101552 0 0.40066934 0 prediction 0.856051306203104 Functional Loss - SNAR-A10;SNAR-A11;SNAR-A14;SNAR-A3;SNAR-A4;SNAR-A5;SNAR-A6;SNAR-A7;SNAR-A8;SNAR-A9 ENSG00000221072;ENSG00000188334 intergenic Human other chr19:48427151 chr19:48427151 . . 0 21 hPsi_associated_SNPs_3043 0 0 0 0 0 unknown 0.438718591688074 0 0 0 hPsi_site_1084 iPseU_CNN:0;iRNA_PseU:0 1085 chr3 50137473 50137473 1 + A T LUAD 50137473 - 50137453 50137493 41 AGCTCTCACCTGTTTTCCTCTTCATCAGCCTCACATCCGCA AGCTCTCACCTGTTTTCCTCATCATCAGCCTCACATCCGCA Direct Loss 0.92797123721971 0 0.29820535 0 prediction 0.855942474439419 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50137473 chr3:50137473 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_3044 0 0 0 0 0 Cytosol 0.438710819059735 0 0 0 hPsi_site_1085 iPseU_CNN:0;iRNA_PseU:0 1086 chr10 88419107 88419107 1 + T A LUAD 88419107 + 88419087 88419127 41 GCTCCTGGGACTACATGAGCTTCACGCCGGCCGTGCGTGCC GCTCCTGGGACTACATGAGCATCACGCCGGCCGTGCGTGCC Direct Loss 0.927946129911801 0 0.5598731 0 prediction 0.855892259823603 Functional Loss - OPN4 ENSG00000122375 CDS Human protein_coding chr10:88419107 chr10:88419107 nonsynonymous SNV 0.965 2 21 hPsi_associated_SNPs_3045 0 0 0 0 1 exosome 0.438555284460493 0 0.1197462 0 hPsi_site_1086 iPseU_CNN:0.1197462;iRNA_PseU:0 1087 chr8 94740491 94740491 1 + T C UCEC 94740491 + 94740471 94740511 41 AGATGATGAGGATGACGAGTTAGATGTTACAGAAGAAGAAA AGATGATGAGGATGACGAGTCAGATGTTACAGAAGAAGAAA Direct Loss 0.927906906709902 0 0.43303573 0 prediction 0.855813813419804 Functional Loss - FAM92A ENSG00000188343 CDS Human protein_coding chr8:94740491 chr8:94740491 nonsynonymous SNV 0.818 0 21 hPsi_associated_SNPs_3046 0 0 1 1 1 unknown 0.438904957972049 0 0 0 hPsi_site_1087 iPseU_CNN:0;iRNA_PseU:0 1088 chr2 71303763 71303763 1 + T C BRCA 71303763 + 71303743 71303783 41 AGGGAGACCCCCTTTCCCGCTATATCTTCAGGAAGGCTGGG AGGGAGACCCCCTTTCCCGCCATATCTTCAGGAAGGCTGGG Direct Loss 0.927867635775698 0 0.2883635 0 prediction 0.855735271551397 Functional Loss - NAGK ENSG00000124357 CDS Human protein_coding chr2:71303763 chr2:71303763 nonsynonymous SNV 0.952 0 21 hPsi_associated_SNPs_3047 0 0 1 0 2 chromatin 0.438718446494308 0 0 0 hPsi_site_1088 iPseU_CNN:0;iRNA_PseU:0 1089 chr12 56514721 56514721 1 + T C LUAD 56514721 + 56514701 56514741 41 GTAGCAGCTGGCCTTGGCCTTTCACCGGCTGACCTACCAAA GTAGCAGCTGGCCTTGGCCTCTCACCGGCTGACCTACCAAA Direct Loss 0.927827636468595 0 0.2384432 0 prediction 0.855655272937191 Functional Loss - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56514721 chr12:56514721 synonymous SNV . 0 21 hPsi_associated_SNPs_3048 0 0 1 0 0 Ribosome 0.443911596459233 0 0 0 hPsi_site_1089 iPseU_CNN:0;iRNA_PseU:0 1090 chr15 32935871 32935871 1 + T C SKCM 32935871 + 32935851 32935891 41 GGATGGACTCCAGCATTTGCTTACAGCCCCCGGACCCCTGA GGATGGACTCCAGCATTTGCCTACAGCCCCCGGACCCCTGA Direct Loss 0.92778418527326 0 0.4735648 0 prediction 0.855568370546521 Functional Loss - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32935871 chr15:32935871 synonymous SNV . 0 21 hPsi_associated_SNPs_3049 0 0 0 0 1 cytosol 0.438718592990185 0 0 0 hPsi_site_1090 iPseU_CNN:0;iRNA_PseU:0 1091 chr17 34174069 34174069 1 + T G UCEC 34174069 + 34174049 34174089 41 ATTAAGTGACATTTGGATTTTTATTTGGGTGGGAGGGCTGG ATTAAGTGACATTTGGATTTGTATTTGGGTGGGAGGGCTGG Direct Loss 0.927711515587344 0 0.28987283 0 prediction 0.855423031174687 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34174069 chr17:34174069 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_3050 0 0 1 0 0 Cytosol 0.438719019546472 0 0 0 hPsi_site_1091 iPseU_CNN:0;iRNA_PseU:0 1092 chr16 30096315 30096315 1 + T G UCEC 30096315 + 30096295 30096335 41 TCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAAGAG TCCAGAAAGATTTCATCATCGTTGAGGCTGCTCCCCAAGAG Direct Loss 0.927698511999781 0 0.74520576 0 prediction 0.855397023999563 Functional Loss - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096315 chr16:30096315 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_3051 0 0 1 0 1 Ribosome 0.438718306462503 0 0.49041152 0 hPsi_site_1092 iPseU_CNN:0.49041152;iRNA_PseU:0 1093 chr22 19118945 19118945 1 + T C UCEC 19118945 + 19118925 19118965 41 ACAGTCCTAAGGAAGAAGGGTTACATCGTAGGCATCAATCT ACAGTCCTAAGGAAGAAGGGCTACATCGTAGGCATCAATCT Direct Loss 0.927694438948034 0 0.6825743 0 prediction 0.855388877896067 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19118945 chr22:19118945 synonymous SNV . 0 21 hPsi_associated_SNPs_3052 0 0 0 0 0 exosome 0.438718590597117 0 0.3651486 0 hPsi_site_1093 iPseU_CNN:0.3651486;iRNA_PseU:0 1094 chr10 89717697 89717697 1 + T C UCEC 89717697 + 89717677 89717717 41 GGAAGACAAGTTCATGTACTTTGAGTTCCCTCAGCCGTTAC GGAAGACAAGTTCATGTACTCTGAGTTCCCTCAGCCGTTAC Direct Loss 0.927678771561839 0 0.46252337 0 prediction 0.855357543123678 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717697 chr10:89717697 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_3053 1 0 1 0 2 Ribosome 0.43872019194248 0 0 0 hPsi_site_1094 iPseU_CNN:0;iRNA_PseU:0 1095 chr2 202149966 202149966 1 + T C UCEC 202149966 + 202149946 202149986 41 GCCACTGTGAATAACTGTGTTTCCTACCGAAACCCTGCAGA GCCACTGTGAATAACTGTGTCTCCTACCGAAACCCTGCAGA Direct Loss 0.927637640022137 0 0.31093764 0 prediction 0.855275280044275 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149966 chr2:202149966 synonymous SNV . 0 21 hPsi_associated_SNPs_3054 0 0 1 0 1 Nucleus 0.438716195935938 0 0 0 hPsi_site_1095 iPseU_CNN:0;iRNA_PseU:0 1096 chr3 9870882 9870882 1 + T C GBM 9870882 + 9870862 9870902 41 GGAAGGCCAGCTTTGAGCTCTATGGCGCTGACTTCGTGTTC GGAAGGCCAGCTTTGAGCTCCATGGCGCTGACTTCGTGTTC Direct Loss 0.92759104414263 0 0.38990194 0 prediction 0.855182088285261 Functional Loss - ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9870882 chr3:9870882 nonsynonymous SNV 0.935 3 21 hPsi_associated_SNPs_3055 0 0 1 0 0 unknown 0.438718593045952 0 0 0 hPsi_site_1096 iPseU_CNN:0;iRNA_PseU:0 1097 chr6 26156793 26156793 1 + T G UCEC 26156793 + 26156773 26156813 41 AGGAGCGCAGCGGCGTATCTTTGGCCGCTCTCAAGAAAGCG AGGAGCGCAGCGGCGTATCTGTGGCCGCTCTCAAGAAAGCG Direct Loss 0.927588005295757 0 0.49456793 0 prediction 0.855176010591514 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156793 chr6:26156793 nonsynonymous SNV 0.221 1 21 hPsi_associated_SNPs_3056 0 0 1 0 0 Ribosome 0.435790519275931 0 0 0 hPsi_site_1097 iPseU_CNN:0;iRNA_PseU:0 1098 chr21 43982238 43982238 1 + T C UCEC 43982238 + 43982218 43982258 41 TTTGCCAAGCTGGTCAGCTATACTTTCCTCTTCTGGCTGCC TTTGCCAAGCTGGTCAGCTACACTTTCCTCTTCTGGCTGCC Direct Loss 0.927570189343355 0 0.6338923 0 prediction 0.85514037868671 Functional Loss - SLC37A1 ENSG00000160190 CDS Human protein_coding chr21:43982238 chr21:43982238 synonymous SNV . 0 21 hPsi_associated_SNPs_3057 0 0 0 0 2 Nucleus 0.438566859438882 0 0.2677846 0 hPsi_site_1098 iPseU_CNN:0.2677846;iRNA_PseU:0 1099 chr1 46158923 46158923 1 + T A SKCM 46158923 + 46158903 46158943 41 CTAAGAACCAGCAGAACAGATATACTTTCTCTCAAGATGTC CTAAGAACCAGCAGAACAGAAATACTTTCTCTCAAGATGTC Direct Loss 0.927562208424222 0 0.32979774 0 prediction 0.855124416848445 Functional Loss - TMEM69 ENSG00000159596 CDS Human protein_coding chr1:46158923 chr1:46158923 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_3058 0 0 1 0 1 Ribosome 0.438680825467424 0 0 0 hPsi_site_1099 iPseU_CNN:0;iRNA_PseU:0 1100 chr4 56291565 56291565 1 + T G rs149833286 56291565 + 56291545 56291585 41 ACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATTTTC ACAATCATAGGAGGCATCGTGTTTTTGGCGTTTGCATTTTC Direct Loss 0.927529599948119 0 0.62108403 0 prediction 0.855059199896237 Functional Loss - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56291565 chr4:56291565 synonymous SNV . 0 21 hPsi_associated_SNPs_3059 0 0 1 0 1 Ribosome 0.438758056873686 0 0.24216806 0 hPsi_site_1100 iPseU_CNN:0.24216806;iRNA_PseU:0 1101 chr12 108913114 108913114 1 + T C KICH 108913114 + 108913094 108913134 41 AACGAGGGCGACGTGAGGCCTTTCATTCGCTTCATCGCCAA AACGAGGGCGACGTGAGGCCCTTCATTCGCTTCATCGCCAA Direct Loss 0.927513333873238 0 0.6417246 0 prediction 0.855026667746477 Functional Loss - FICD ENSG00000198855 CDS Human protein_coding chr12:108913114 chr12:108913114 synonymous SNV . 0 21 hPsi_associated_SNPs_3060 0 0 0 0 0 chromatin 0.43871871876963 0 0.2834492 0 hPsi_site_1101 iPseU_CNN:0.2834492;iRNA_PseU:0 1102 chr5 141017838 141017838 1 + T C UCEC 141017838 + 141017818 141017858 41 AACCGCCCCAACATGGGCTATATATGCTCTTCCTGCTTGTG AACCGCCCCAACATGGGCTACATATGCTCTTCCTGCTTGTG Direct Loss 0.92749023313695 0 0.295313 0 prediction 0.854980466273899 Functional Loss - RELL2 ENSG00000164620 CDS Human protein_coding chr5:141017838 chr5:141017838 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_3061 0 0 0 0 0 chromatin 0.438757625334407 0 0 0 hPsi_site_1102 iPseU_CNN:0;iRNA_PseU:0 1103 chr18 76755050 76755050 1 + T C COAD 76755050 + 76755030 76755070 41 GTGCTCCACTATGGGTAATTTAAAACAGCACTTACTGACAC GTGCTCCACTATGGGTAATTCAAAACAGCACTTACTGACAC Direct Loss 0.927436714247929 0 0.25017256 0 prediction 0.854873428495859 Functional Loss - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76755050 chr18:76755050 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_3062 0 0 0 0 0 exosome 0.435630393537451 0 0 0 hPsi_site_1103 iPseU_CNN:0;iRNA_PseU:0 1104 chr1 1104438 1104438 1 + T C STAD 1104438 + 1104418 1104458 41 AGACCTGGCCCTCTGTCTAATACTGTCTGGTAAAACCGTCC AGACCTGGCCCTCTGTCTAACACTGTCTGGTAAAACCGTCC Direct Loss 0.927429585374297 0 0.28571585 0 prediction 0.854859170748595 Functional Loss - MIR429 ENSG00000198976 ncRNA_exonic Human miRNA chr1:1104438 chr1:1104438 . . 0 21 hPsi_associated_SNPs_3063 0 0 1 0 0 unknown 0.439022434810667 0 0 0 hPsi_site_1104 iPseU_CNN:0;iRNA_PseU:0 1105 chr1 8037744 8037744 1 + T G UCEC 8037744 + 8037724 8037764 41 TGTTGGCTCATGAAATAGGTTTTGGAAGTAAAGTTACAACA TGTTGGCTCATGAAATAGGTGTTGGAAGTAAAGTTACAACA Direct Loss 0.927412029697045 0 0.22826567 0 prediction 0.85482405939409 Functional Loss - PARK7 ENSG00000116288 CDS Human protein_coding chr1:8037744 chr1:8037744 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_3064 0 0 1 0 2 Ribosome 0.438718592858449 0 0 0 hPsi_site_1105 iPseU_CNN:0;iRNA_PseU:0 1106 chr10 104196307 104196307 1 + T C SKCM 104196307 + 104196287 104196327 41 ATTCCATAGGCTGTGAGCTCTAGCAATGCCCTGTGGACTCA ATTCCATAGGCTGTGAGCTCCAGCAATGCCCTGTGGACTCA Direct Loss 0.927411403433551 0 0.41626313 0 prediction 0.854822806867103 Functional Loss - MIR146B ENSG00000202569 ncRNA_exonic Human miRNA chr10:104196307 chr10:104196307 . . 0 21 hPsi_associated_SNPs_3065 0 0 1 0 0 unknown 0.438696938356711 0 0 0 hPsi_site_1106 iPseU_CNN:0;iRNA_PseU:0 1107 chr9 131846992 131846992 1 + T G HNSC 131846992 + 131846972 131847012 41 CTACCTGAGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCG CTACCTGAGCCTCAGCCCTGGATTTGTCATCGTCGGTTTCG Direct Loss 0.927404288733971 0 0.79230833 0 prediction 0.854808577467942 Functional Loss - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846992 chr9:131846992 nonsynonymous SNV 0.920 1 21 hPsi_associated_SNPs_3066 0 0 1 0 2 Ribosome 0.438700812546394 0 0.58461666 0 hPsi_site_1107 iPseU_CNN:0.58461666;iRNA_PseU:0 1108 chr10 43882107 43882107 1 + T G UCEC 43882107 + 43882087 43882127 41 AGTCATAGCCACCCATGCTGTTCTGCCCACTGTAGCCGGCC AGTCATAGCCACCCATGCTGGTCTGCCCACTGTAGCCGGCC Direct Loss 0.927376876798235 0 0.26822075 0 prediction 0.85475375359647 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882107 chr10:43882107 nonsynonymous SNV 0.991 0 21 hPsi_associated_SNPs_3067 0 0 0 0 0 Cytosol 0.438718676468291 0 0 0 hPsi_site_1108 iPseU_CNN:0;iRNA_PseU:0 1109 chr2 46607719 46607719 1 + T A rs35606117 46607719 - 46607699 46607739 41 GGATCTGGGGGCCACTGGGTATTGGATCTGCCCCCCATGGA GGATCTGGGGGCCACTGGGTTTTGGATCTGCCCCCCATGGA Direct Gain 0 0.989614686438753 0 0.969588398933411 prediction 0.979229372877505 Functional Gain - EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607719 chr2:46607719 nonsynonymous SNV 0.988 1 21 hPsi_associated_SNPs_102149 0 0 0 0 0 Cytosol 0 0.438718592995102 0.939176797866822 0 hPsi_site_1109 iPseU_CNN:0.939176797866822;iRNA_PseU:0 1110 chr7 100777142 100777142 1 + G A STAD 100777142 - 100777122 100777162 41 AGGAGGCGGGGCAGCCTGGTCATGTTGCCTTTCCAGTGGCT AGGAGGCGGGGCAGCCTGGTTATGTTGCCTTTCCAGTGGCT Direct Gain 0 0.989246500383048 0 0.999996185302734 prediction 0.978493000766097 Functional Gain - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777142 chr7:100777142 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102150 0 0 0 0 0 Ribosome 0 0.438718569254961 0.999992370605468 0 hPsi_site_1110 iPseU_CNN:0.999992370605468;iRNA_PseU:0 1111 chr19 30936347 30936347 1 + G A HNSC 30936347 - 30936327 30936367 41 CACTCGGTGGGCTTCTCCTTCATGTTCCCAGGACCCTGCAG CACTCGGTGGGCTTCTCCTTTATGTTCCCAGGACCCTGCAG Direct Gain 0 0.989197733028685 0 0.998066425323486 prediction 0.97839546605737 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936347 chr19:30936347 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_102151 0 0 0 0 0 exosome 0 0.438720060513973 0.996132850646972 0 hPsi_site_1111 iPseU_CNN:0.996132850646972;iRNA_PseU:0 1112 chr11 123810464 123810464 1 + C T SKCM 123810464 + 123810444 123810484 41 GGAAACCTTCTTATTGTGGTCATAGTGACCTCCGACCCACA GGAAACCTTCTTATTGTGGTTATAGTGACCTCCGACCCACA Direct Gain 0 0.988656814645089 0 0.999279499053955 prediction 0.977313629290178 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123810464 chr11:123810464 synonymous SNV . 0 21 hPsi_associated_SNPs_102152 0 0 0 0 0 exosome 0 0.43875505708666 0.99855899810791 0 hPsi_site_1112 iPseU_CNN:0.99855899810791;iRNA_PseU:0 1113 chr12 54423519 54423519 1 + C A STAD 54423519 - 54423499 54423539 41 CGTTAGGTAGCGATTGAAGTGAAATTCCTTCTCCAGTTCCA CGTTAGGTAGCGATTGAAGTTAAATTCCTTCTCCAGTTCCA Direct Gain 0 0.988620047803314 0 0.794484257698059 prediction 0.977240095606629 Functional Gain - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54423519 chr12:54423519 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102153 0 0 0 0 0 exosome 0 0.438653069715334 0.588968515396118 0 hPsi_site_1113 iPseU_CNN:0.588968515396118;iRNA_PseU:0 1114 chr7 55466117 55466117 1 + C T UCEC 55466117 + 55466097 55466137 41 GGGTGGGAAATTATTCCAGGCATAGCCCTTTTGTACCTGCA GGGTGGGAAATTATTCCAGGTATAGCCCTTTTGTACCTGCA Direct Gain 0 0.987944657764943 0 0.368143916130066 prediction 0.975889315529886 Functional Gain - LANCL2 ENSG00000132434 CDS Human protein_coding chr7:55466117 chr7:55466117 synonymous SNV . 0 21 hPsi_associated_SNPs_102154 0 0 0 0 1 Ribosome 0 0.438718693833716 0 0 hPsi_site_1114 iPseU_CNN:0;iRNA_PseU:0 1115 chr2 113305100 113305100 1 + A T COAD 113305100 + 113305080 113305120 41 CCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCTC CCAAGCTTTGCAACTTACGTTACCTTCCCCCACAAGCCCTC Direct Gain 0 0.987928140019072 0 0.999911844730377 prediction 0.975856280038143 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113305100 chr2:113305100 nonsynonymous SNV 0.028 1 21 hPsi_associated_SNPs_102155 0 0 1 0 1 Nucleus 0 0.438716926371929 0.999823689460754 0 hPsi_site_1115 iPseU_CNN:0.999823689460754;iRNA_PseU:0 1116 chr12 6943117 6943117 1 + G A LUSC 6943117 - 6943097 6943137 41 AGCTGCCTGGAATCCTGGGTCAAGGTCACACCCTCCAGGAG AGCTGCCTGGAATCCTGGGTTAAGGTCACACCCTCCAGGAG Direct Gain 0 0.987437447648979 0 0.997317492961884 prediction 0.974874895297957 Functional Gain - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943117 chr12:6943117 synonymous SNV . 0 21 hPsi_associated_SNPs_102156 0 0 0 0 0 membrane 0 0.438718592997315 0.994634985923768 0 hPsi_site_1116 iPseU_CNN:0.994634985923768;iRNA_PseU:0 1117 chr12 49784103 49784103 1 + C T rs559051977 49784103 + 49784083 49784123 41 AAAAACGCATAGTTAATGGTCATAGACCTTTTTCCAAAACA AAAAACGCATAGTTAATGGTTATAGACCTTTTTCCAAAACA Direct Gain 0 0.986340817697467 0 0.99998277425766 prediction 0.972681635394935 Functional Gain - LOC100335030 ENSG00000123352 intronic Human protein_coding chr12:49784103 chr12:49784103 . . 0 21 hPsi_associated_SNPs_102157 0 0 0 0 0 unknown 0 0.438408250547477 0.99996554851532 0 hPsi_site_1117 iPseU_CNN:0.99996554851532;iRNA_PseU:0 1118 chr9 78601099 78601099 1 + G A SKCM 78601099 - 78601079 78601119 41 AGACTGGGCACGACTGAAGTCATAATCCCTCTTTGTCCGCT AGACTGGGCACGACTGAAGTTATAATCCCTCTTTGTCCGCT Direct Gain 0 0.98633877786923 0 0.999989151954651 prediction 0.97267755573846 Functional Gain - PCSK5 ENSG00000099139 CDS Human protein_coding chr9:78601099 chr9:78601099 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_102158 0 0 0 0 0 exosome 0 0.43972240986227 0.999978303909302 0 hPsi_site_1118 iPseU_CNN:0.999978303909302;iRNA_PseU:0 1119 chr11 57958805 57958805 1 + G A LUAD 57958805 - 57958785 57958825 41 AGGGGATTCAGCATTGGGGTCACCACCGTGTAGAGCACAGA AGGGGATTCAGCATTGGGGTTACCACCGTGTAGAGCACAGA Direct Gain 0 0.986317870968811 0 0.983255624771118 prediction 0.972635741937622 Functional Gain - OR9Q2 ENSG00000186513 CDS Human protein_coding chr11:57958805 chr11:57958805 synonymous SNV . 0 21 hPsi_associated_SNPs_102159 0 0 0 0 0 unknown 0 0.438758544754095 0.966511249542236 0 hPsi_site_1119 iPseU_CNN:0.966511249542236;iRNA_PseU:0 1120 chr22 40391100 40391100 1 + G A rs149259541 40391100 - 40391080 40391120 41 AAGGCGGCCTGCGCCTCGGTCACCTTCTCGTTCACGTGCGC AAGGCGGCCTGCGCCTCGGTTACCTTCTCGTTCACGTGCGC Direct Gain 0 0.986218305000158 0 0.999971568584442 prediction 0.972436610000317 Functional Gain - FAM83F ENSG00000133477 CDS Human protein_coding chr22:40391100 chr22:40391100 synonymous SNV . 0 21 hPsi_associated_SNPs_102160 0 0 0 0 0 Ribosome 0 0.439306655939103 0.999943137168884 0 hPsi_site_1120 iPseU_CNN:0.999943137168884;iRNA_PseU:0 1121 chr5 33937817 33937817 1 + C A LIHC 33937817 - 33937797 33937837 41 ACGATGGTCACTGATTTGGTGACCTTCGACAGTCTCCGGGC ACGATGGTCACTGATTTGGTTACCTTCGACAGTCTCCGGGC Direct Gain 0 0.986208514566953 0 0.99999988079071 prediction 0.972417029133907 Functional Gain - RXFP3 ENSG00000182631 CDS Human protein_coding chr5:33937817 chr5:33937817 synonymous SNV . 0 21 hPsi_associated_SNPs_102161 0 0 0 0 0 unknown 0 0.438684904827383 0.99999976158142 0 hPsi_site_1121 iPseU_CNN:0.99999976158142;iRNA_PseU:0 1122 chr20 42887032 42887032 1 + G A rs553730085 42887032 - 42887012 42887052 41 GGGCAGGGAAGCCAGAGGGGCACCTGCCCCGGCCACCTGCC GGGCAGGGAAGCCAGAGGGGTACCTGCCCCGGCCACCTGCC Direct Gain 0 0.985940529281109 0 0.911764621734619 prediction 0.971881058562217 Functional Gain - GDAP1L1 ENSG00000124194 UTR3 Human protein_coding chr20:42887032 chr20:42887032 . 0.003 0 21 hPsi_associated_SNPs_102162 0 0 0 0 0 nucleoplasm 0 0.438721528776674 0.823529243469238 0 hPsi_site_1122 iPseU_CNN:0.823529243469238;iRNA_PseU:0 1123 chr17 26823500 26823500 1 + C T SKCM 26823500 + 26823480 26823520 41 TGCCTCCACCCTCTCTACGTCATGCTCCCCTGCACTCTGGC TGCCTCCACCCTCTCTACGTTATGCTCCCCTGCACTCTGGC Direct Gain 0 0.985884592478703 0 0.965840101242065 prediction 0.971769184957405 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26823500 chr17:26823500 synonymous SNV . 0 21 hPsi_associated_SNPs_102163 0 0 0 0 1 unknown 0 0.43866314452131 0.93168020248413 0 hPsi_site_1123 iPseU_CNN:0.93168020248413;iRNA_PseU:0 1124 chrX 29938136 29938136 1 + G A LUSC 29938136 - 29938116 29938156 41 ACAGGAGTAATTTCCCAAGTCACCTTCTTCCACAGAGTCCA ACAGGAGTAATTTCCCAAGTTACCTTCTTCCACAGAGTCCA Direct Gain 0 0.985879848229907 0 0.999999403953552 prediction 0.971759696459814 Functional Gain - IL1RAPL1 ENSG00000169306 CDS Human protein_coding chrX:29938136 chrX:29938136 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102164 0 0 0 0 0 exosome 0 0.438705123118938 0.999998807907104 0 hPsi_site_1124 iPseU_CNN:0.999998807907104;iRNA_PseU:0 1125 chr11 22248953 22248953 1 + G T LUSC 22248953 + 22248933 22248973 41 AAATGCCTATTAAGGAGAGTGATATTCCCCGCCCTAAGCAC AAATGCCTATTAAGGAGAGTTATATTCCCCGCCCTAAGCAC Direct Gain 0 0.985731703649669 0 0.999904811382294 prediction 0.971463407299338 Functional Gain - ANO5 ENSG00000171714 CDS Human protein_coding chr11:22248953 chr11:22248953 nonsynonymous SNV 0.923 4 21 hPsi_associated_SNPs_102165 0 0 1 0 0 chromatin 0 0.438718308072419 0.999809622764588 0 hPsi_site_1125 iPseU_CNN:0.999809622764588;iRNA_PseU:0 1126 chr1 156348025 156348025 1 + C T BLCA 156348025 + 156348005 156348045 41 GTGGGGGCGGGGTGCTGCCTCTCACCCCACCTCCCCAGGTG GTGGGGGCGGGGTGCTGCCTTTCACCCCACCTCCCCAGGTG Direct Gain 0 0.985685749865122 0 0.999651312828064 prediction 0.971371499730245 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348025 chr1:156348025 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_102166 0 0 1 0 0 Cytosol 0 0.438718593314505 0.999302625656128 0 hPsi_site_1126 iPseU_CNN:0.999302625656128;iRNA_PseU:0 1127 chr9 130224635 130224635 1 + C T THCA 130224635 + 130224615 130224655 41 GATTGCCGCAGATGCTGGCTCACGTTCGAACCCTGGAGGTA GATTGCCGCAGATGCTGGCTTACGTTCGAACCCTGGAGGTA Direct Gain 0 0.985614810401 0 0.999999821186066 prediction 0.971229620802 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130224635 chr9:130224635 nonsynonymous SNV 0.979 3 21 hPsi_associated_SNPs_102167 0 0 1 0 1 chromatin 0 0.438718277753474 0.999999642372132 0 hPsi_site_1127 iPseU_CNN:0.999999642372132;iRNA_PseU:0 1128 chr12 5154222 5154222 1 + C T SKCM 5154222 + 5154202 5154242 41 GGGGCCAACGGCAGCGGGGTCATGGCCCCGCCCTCTGGCCC GGGGCCAACGGCAGCGGGGTTATGGCCCCGCCCTCTGGCCC Direct Gain 0 0.985532843927776 0 0.999774575233459 prediction 0.971065687855552 Functional Gain - KCNA5 ENSG00000130037 CDS Human protein_coding chr12:5154222 chr12:5154222 synonymous SNV . 0 21 hPsi_associated_SNPs_102168 0 0 0 0 0 exosome 0 0.438718593138181 0.999549150466918 0 hPsi_site_1128 iPseU_CNN:0.999549150466918;iRNA_PseU:0 1129 chr20 25278235 25278235 1 + G A rs200171542 25278235 - 25278215 25278255 41 AGGGGCAAGGCTGTGAGGGGCTCACCCCCACCTCCCAGTGC AGGGGCAAGGCTGTGAGGGGTTCACCCCCACCTCCCAGTGC Direct Gain 0 0.985432868802704 0 0.944627225399017 prediction 0.970865737605408 Functional Gain - PYGB ENSG00000100994 UTR3 Human protein_coding chr20:25278235 chr20:25278235 . . 0 21 hPsi_associated_SNPs_102169 0 0 0 0 0 Nucleus 0 0.438718551625868 0.889254450798034 0 hPsi_site_1129 iPseU_CNN:0.889254450798034;iRNA_PseU:0 1130 chr12 56863238 56863238 1 + G A LUAD 56863238 - 56863218 56863258 41 TGAACCACAGAGACCTGGCTCACATCCACCAGGCTCAGCTT TGAACCACAGAGACCTGGCTTACATCCACCAGGCTCAGCTT Direct Gain 0 0.985158821290697 0 0.959423184394836 prediction 0.970317642581395 Functional Gain - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863238 chr12:56863238 synonymous SNV . 0 21 hPsi_associated_SNPs_102170 0 0 0 0 0 Cytosol 0 0.43871847127 0.918846368789672 0 hPsi_site_1130 iPseU_CNN:0.918846368789672;iRNA_PseU:0 1131 chr5 79026507 79026507 1 + C T COAD 79026507 + 79026487 79026527 41 AGAGAATGAGGAATTTGAGGCTTATTCCCCAGCTGCAGCCC AGAGAATGAGGAATTTGAGGTTTATTCCCCAGCTGCAGCCC Direct Gain 0 0.984964420857044 0 0.99493008852005 prediction 0.969928841714088 Functional Gain - CMYA5 ENSG00000164309 CDS Human protein_coding chr5:79026507 chr5:79026507 nonsynonymous SNV 0.060 0 21 hPsi_associated_SNPs_102171 0 0 0 0 0 exosome 0 0.438718620510981 0.9898601770401 0 hPsi_site_1131 iPseU_CNN:0.9898601770401;iRNA_PseU:0 1132 chr4 90830469 90830469 1 + G T SARC 90830469 + 90830449 90830489 41 ACCAGGTTATCTCCCACAGTGATATTGGACAACCAGGTCAC ACCAGGTTATCTCCCACAGTTATATTGGACAACCAGGTCAC Direct Gain 0 0.984898102443713 0 0.99799770116806 prediction 0.969796204887427 Functional Gain - MMRN1 ENSG00000138722 CDS Human protein_coding chr4:90830469 chr4:90830469 synonymous SNV . 0 21 hPsi_associated_SNPs_102172 0 0 0 0 2 cytosol 0 0.438726376126893 0.99599540233612 0 hPsi_site_1132 iPseU_CNN:0.99599540233612;iRNA_PseU:0 1133 chr10 81114507 81114507 1 + G A rs74142396 81114507 - 81114487 81114527 41 AGTAAAGATCAGCTCCAAGTCACAGACCCCTCTTCCAGAAA AGTAAAGATCAGCTCCAAGTTACAGACCCCTCTTCCAGAAA Direct Gain 0 0.984822677000449 0 0.999999225139618 prediction 0.969645354000898 Functional Gain - PPIF ENSG00000108179 UTR3 Human protein_coding chr10:81114507 chr10:81114507 . . 0 21 hPsi_associated_SNPs_102173 0 0 0 0 0 Cytosol 0 0.438717492261375 0.999998450279236 0 hPsi_site_1133 iPseU_CNN:0.999998450279236;iRNA_PseU:0 1134 chr9 115179164 115179164 1 + C T BLCA 115179164 + 115179144 115179184 41 TGAAAAAGAGCAAAGTTGCTCATATCCTCAATATCAGTCCA TGAAAAAGAGCAAAGTTGCTTATATCCTCAATATCAGTCCA Direct Gain 0 0.984817138026255 0 0.851909101009369 prediction 0.969634276052511 Functional Gain - HSDL2 ENSG00000119471 CDS Human protein_coding chr9:115179164 chr9:115179164 nonsynonymous SNV 0.989 5 21 hPsi_associated_SNPs_102174 0 0 1 2 2 Ribosome 0 0.438702484494641 0.703818202018738 0 hPsi_site_1134 iPseU_CNN:0.703818202018738;iRNA_PseU:0 1135 chr16 24196802 24196802 1 + G A SKCM 24196802 - 24196782 24196822 41 GGATTGGAAGAGTTCATCTTCATCCTCCCCTTCAAAGGGTG GGATTGGAAGAGTTCATCTTTATCCTCCCCTTCAAAGGGTG Direct Gain 0 0.984702010546047 0 0.999675989151001 prediction 0.969404021092093 Functional Gain - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24196802 chr16:24196802 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102175 0 0 0 0 0 Ribosome 0 0.438718592995102 0.999351978302002 0 hPsi_site_1135 iPseU_CNN:0.999351978302002;iRNA_PseU:0 1136 chr19 44634808 44634808 1 + C A rs192851339 44634808 - 44634788 44634828 41 AGGCTGGAGTGCAGTGGCGTGATCTCCGCTCACTGCAAGCT AGGCTGGAGTGCAGTGGCGTTATCTCCGCTCACTGCAAGCT Direct Gain 0 0.984639687226798 0 0.995665848255157 prediction 0.969279374453596 Functional Gain - ZNF225 ENSG00000256294 intronic Human protein_coding chr19:44634808 chr19:44634808 . . 0 21 hPsi_associated_SNPs_102176 0 0 0 0 0 exosome 0 0.442598885249689 0.991331696510314 0 hPsi_site_1136 iPseU_CNN:0.991331696510314;iRNA_PseU:0 1137 chr18 77895867 77895867 1 + G A CESC 77895867 - 77895847 77895887 41 TCAGCCTGAGGCCTCACCTTCACATACACAGGCACCAGTGA TCAGCCTGAGGCCTCACCTTTACATACACAGGCACCAGTGA Direct Gain 0 0.984631038594438 0 0.999963760375977 prediction 0.969262077188876 Functional Gain - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895867 chr18:77895867 synonymous SNV . 0 21 hPsi_associated_SNPs_102177 0 0 0 0 0 Cytosol 0 0.438726098356902 0.999927520751954 0 hPsi_site_1137 iPseU_CNN:0.999927520751954;iRNA_PseU:0 1138 chr20 62187101 62187101 1 + G A SKCM 62187101 - 62187081 62187121 41 TGGTTCCAGCAGCTGCTGGTCATCTGCCTCCTCCTGGTCCA TGGTTCCAGCAGCTGCTGGTTATCTGCCTCCTCCTGGTCCA Direct Gain 0 0.984583657905537 0 0.942136406898499 prediction 0.969167315811073 Functional Gain - FNDC11 ENSG00000125531 CDS Human protein_coding chr20:62187101 chr20:62187101 nonsynonymous SNV 0.855 0 21 hPsi_associated_SNPs_102178 0 0 1 0 0 exosome 0 0.43848960128856 0.884272813796998 0 hPsi_site_1138 iPseU_CNN:0.884272813796998;iRNA_PseU:0 1139 chr19 44495708 44495708 1 + G A UCEC 44495708 - 44495688 44495728 41 ACAGCCACATCCTTGAAGGTCACTGCCTCCTACAACATCAA ACAGCCACATCCTTGAAGGTTACTGCCTCCTACAACATCAA Direct Gain 0 0.984505000495328 0 0.999954462051392 prediction 0.969010000990656 Functional Gain - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44495708 chr19:44495708 synonymous SNV . 0 21 hPsi_associated_SNPs_102179 0 0 0 0 0 cytosol 0 0.43871858945057 0.999908924102784 0 hPsi_site_1139 iPseU_CNN:0.999908924102784;iRNA_PseU:0 1140 chr11 294285 294285 1 + G A BLCA 294285 - 294265 294305 41 AGACACACAGGGTCAAAGGTCACACCCGCTCGGGTGACCCT AGACACACAGGGTCAAAGGTTACACCCGCTCGGGTGACCCT Direct Gain 0 0.984206000573736 0 0.999885559082031 prediction 0.968412001147472 Functional Gain - PGGHG ENSG00000142102 CDS Human protein_coding chr11:294285 chr11:294285 synonymous SNV . 0 21 hPsi_associated_SNPs_102180 0 0 0 0 0 unknown 0 0.438566312682238 0.999771118164062 0 hPsi_site_1140 iPseU_CNN:0.999771118164062;iRNA_PseU:0 1141 chr5 5239802 5239802 1 + C A LUSC 5239802 - 5239782 5239822 41 AGAAGGAATGGTGACCATGTGATAATACTCTAGATAAAGGA AGAAGGAATGGTGACCATGTTATAATACTCTAGATAAAGGA Direct Gain 0 0.984044042628395 0 0.677860379219055 prediction 0.968088085256791 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5239802 chr5:5239802 nonsynonymous SNV 0.936 0 21 hPsi_associated_SNPs_102181 0 0 0 0 0 exosome 0 0.438718553266213 0.35572075843811 0 hPsi_site_1141 iPseU_CNN:0.35572075843811;iRNA_PseU:0 1142 chr11 132016333 132016333 1 + G A SARC 132016333 - 132016313 132016353 41 GCAGGTGTAAGGGCCCTCGTCATACACATCCACGTTCTGGA GCAGGTGTAAGGGCCCTCGTTATACACATCCACGTTCTGGA Direct Gain 0 0.983953610031079 0 0.999990940093994 prediction 0.967907220062158 Functional Gain - NTM ENSG00000182667 CDS Human protein_coding chr11:132016333 chr11:132016333 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102182 0 0 0 0 0 Cytosol 0 0.436134117204897 0.999981880187988 0 hPsi_site_1142 iPseU_CNN:0.999981880187988;iRNA_PseU:0 1143 chr16 31128987 31128987 1 + C T rs142359178 31128987 + 31128967 31129007 41 GTGGCGTCCGATTCTGGCGTCACTTCCCTTCCCGCGATGGC GTGGCGTCCGATTCTGGCGTTACTTCCCTTCCCGCGATGGC Direct Gain 0 0.983871579708843 0 0.999958515167236 prediction 0.967743159417686 Functional Gain - KAT8 ENSG00000103510 UTR5 Human protein_coding chr16:31128987 chr16:31128987 . . 0 21 hPsi_associated_SNPs_102183 0 0 1 0 0 Ribosome 0 0.441283510792732 0.999917030334472 0 hPsi_site_1143 iPseU_CNN:0.999917030334472;iRNA_PseU:0 1144 chr11 93796775 93796775 1 + G A ESCA 93796775 - 93796755 93796795 41 GGCATCGGCTGGAGTAGGTGCATATTCTTCTCTCACCGGCC GGCATCGGCTGGAGTAGGTGTATATTCTTCTCTCACCGGCC Direct Gain 0 0.983829926889252 0 0.993703722953796 prediction 0.967659853778503 Functional Gain - HEPHL1 ENSG00000181333 CDS Human protein_coding chr11:93796775 chr11:93796775 nonsynonymous SNV 0.821 4 21 hPsi_associated_SNPs_102184 0 0 0 0 0 exosome 0 0.438718591751052 0.987407445907592 0 hPsi_site_1144 iPseU_CNN:0.987407445907592;iRNA_PseU:0 1145 chr22 39477025 39477025 1 + G A CESC 39477025 - 39477005 39477045 41 GGATATGTACCAGGTGACCTCATACTCCTGGTCACGATGCA GGATATGTACCAGGTGACCTTATACTCCTGGTCACGATGCA Direct Gain 0 0.983703956483273 0 0.994203329086304 prediction 0.967407912966545 Functional Gain - APOBEC3G ENSG00000239713 CDS Human protein_coding chr22:39477025 chr22:39477025 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102185 0 0 0 0 0 Cytosol 0 0.438232679474183 0.988406658172608 0 hPsi_site_1145 iPseU_CNN:0.988406658172608;iRNA_PseU:0 1146 chr16 89167500 89167500 1 + C T rs148969539 89167500 + 89167480 89167520 41 GCGGCCCAGCTGGAGTATGTCATCTGCGACTCCCAGAGCTC GCGGCCCAGCTGGAGTATGTTATCTGCGACTCCCAGAGCTC Direct Gain 0 0.983637359421828 0 0.99999988079071 prediction 0.967274718843655 Functional Gain - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89167500 chr16:89167500 synonymous SNV . 0 21 hPsi_associated_SNPs_102186 1 0 1 0 0 chromatin 0 0.438120658683256 0.99999976158142 0 hPsi_site_1146 iPseU_CNN:0.99999976158142;iRNA_PseU:0 1147 chr12 121435419 121435419 1 + G A COAD 121435419 - 121435399 121435439 41 GCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGG GCCATGAAGGGGCTCTGGGTTACATGGCTCTGCACAGGTGG Direct Gain 0 0.983557641067806 0 0.999998569488525 prediction 0.967115282135611 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121435419 chr12:121435419 synonymous SNV . 0 21 hPsi_associated_SNPs_102187 0 0 0 0 0 cytosol 0 0.438718591992161 0.99999713897705 0 hPsi_site_1147 iPseU_CNN:0.99999713897705;iRNA_PseU:0 1148 chr11 124016917 124016917 1 + A T rs3741107 124016917 + 124016897 124016937 41 TCAAAACATTCATAGGCAGTAATGTTCCTCCCAGGGTTTCC TCAAAACATTCATAGGCAGTTATGTTCCTCCCAGGGTTTCC Direct Gain 0 0.983524117521488 0 0.999990940093994 prediction 0.967048235042975 Functional Gain - VWA5A ENSG00000110002 UTR3 Human protein_coding chr11:124016917 chr11:124016917 . . 0 21 hPsi_associated_SNPs_102188 0 0 0 0 0 nucleus 0 0.438718594398294 0.999981880187988 0 hPsi_site_1148 iPseU_CNN:0.999981880187988;iRNA_PseU:0 1149 chr16 28883695 28883695 1 + C T TGCT 28883695 + 28883675 28883715 41 AGGCGGGGTGAATACGTCCTCACCTTCAACTTCCAGGGCAA AGGCGGGGTGAATACGTCCTTACCTTCAACTTCCAGGGCAA Direct Gain 0 0.983519678631391 0 0.979087948799133 prediction 0.967039357262783 Functional Gain - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883695 chr16:28883695 synonymous SNV . 0 21 hPsi_associated_SNPs_102189 0 0 0 0 1 Cytosol 0 0.43871859284366 0.958175897598266 0 hPsi_site_1149 iPseU_CNN:0.958175897598266;iRNA_PseU:0 1150 chr19 49990618 49990618 1 + G A rs7246497 49990618 - 49990598 49990638 41 CGGAGGCGGTGCTGCTGGGGCACGGCCGTCCAGCCTCGGCG CGGAGGCGGTGCTGCTGGGGTACGGCCGTCCAGCCTCGGCG Direct Gain 0 0.983449758457664 0 0.999999642372131 prediction 0.966899516915327 Functional Gain - RPL13A;RPL13AP5 ENSG00000273189 ncRNA_exonic Human processed_transcript chr19:49990618 chr19:49990618 . . 0 21 hPsi_associated_SNPs_102190 0 0 0 0 0 unknown 0 0.437846216580088 0.999999284744262 0 hPsi_site_1150 iPseU_CNN:0.999999284744262;iRNA_PseU:0 1151 chrX 109694334 109694334 1 + G T UCEC 109694334 + 109694314 109694354 41 GTAGCACCAGATTCTGCAGAGATATCACCATTGGCAATGCC GTAGCACCAGATTCTGCAGATATATCACCATTGGCAATGCC Direct Gain 0 0.983444661668547 0 0.70397537946701 prediction 0.966889323337094 Functional Gain - RTL9 ENSG00000243978 CDS Human protein_coding chrX:109694334 chrX:109694334 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_102191 0 0 0 0 0 unknown 0 0.438720755064995 0.40795075893402 0 hPsi_site_1151 iPseU_CNN:0.40795075893402;iRNA_PseU:0 1152 chr19 41063031 41063031 1 + G A LUSC 41063031 - 41063011 41063051 41 GGTGGCCGCTGCTGTATGGCCACACTCGATCAGCTCATCCA GGTGGCCGCTGCTGTATGGCTACACTCGATCAGCTCATCCA Direct Gain 0 0.983441941371161 0 0.999382495880127 prediction 0.966883882742321 Functional Gain - SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41063031 chr19:41063031 nonsynonymous SNV 0.989 4 21 hPsi_associated_SNPs_102192 0 0 0 0 0 cytosol 0 0.437895930943237 0.998764991760254 0 hPsi_site_1152 iPseU_CNN:0.998764991760254;iRNA_PseU:0 1153 chr5 156734811 156734811 1 + A T STAD 156734811 + 156734791 156734831 41 TAATGGATGGAAATGTCAGTAACATTTACAAACTGGATGCC TAATGGATGGAAATGTCAGTTACATTTACAAACTGGATGCC Direct Gain 0 0.983430766277509 0 0.999233484268188 prediction 0.966861532555018 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156734811 chr5:156734811 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102193 0 0 1 0 2 Cytosol 0 0.438555009244963 0.998466968536376 0 hPsi_site_1153 iPseU_CNN:0.998466968536376;iRNA_PseU:0 1154 chr14 95109987 95109987 1 + C T SKCM 95109987 + 95109967 95110007 41 GGGAACACCACCACCTTCTTCATCTTCCCCAACAGGGGCAA GGGAACACCACCACCTTCTTTATCTTCCCCAACAGGGGCAA Direct Gain 0 0.983247595346283 0 0.999067544937134 prediction 0.966495190692567 Functional Gain - SERPINA13P ENSG00000187483 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr14:95109987 chr14:95109987 . . 0 21 hPsi_associated_SNPs_102194 0 0 0 0 1 unknown 0 0.43871872923666 0.998135089874268 0 hPsi_site_1154 iPseU_CNN:0.998135089874268;iRNA_PseU:0 1155 chr12 101381408 101381408 1 + G A SKCM 101381408 - 101381388 101381428 41 GAAAGGGGCAGTGTAGCAGTCATTCTCCTCCAGGTCTGGCA GAAAGGGGCAGTGTAGCAGTTATTCTCCTCCAGGTCTGGCA Direct Gain 0 0.983159296397183 0 0.950982809066772 prediction 0.966318592794366 Functional Gain - ANO4 ENSG00000151572 CDS Human protein_coding chr12:101381408 chr12:101381408 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102195 0 0 0 0 0 exosome 0 0.438710061982358 0.901965618133544 0 hPsi_site_1155 iPseU_CNN:0.901965618133544;iRNA_PseU:0 1156 chr18 13058716 13058716 1 + G T rs144860683 13058716 + 13058696 13058736 41 GGGACCTCAGCGGTTAGCCTGACTCTTCTTCCCCCCAGCCC GGGACCTCAGCGGTTAGCCTTACTCTTCTTCCCCCCAGCCC Direct Gain 0 0.983075727228517 0 0.99953705072403 prediction 0.966151454457034 Functional Gain - CEP192 ENSG00000101639 UTR3 Human protein_coding chr18:13058716 chr18:13058716 . . 0 21 hPsi_associated_SNPs_102196 0 0 1 0 0 Nucleus 0 0.43871859299511 0.99907410144806 0 hPsi_site_1156 iPseU_CNN:0.99907410144806;iRNA_PseU:0 1157 chr5 66459191 66459191 1 + C T BLCA 66459191 + 66459171 66459211 41 ACCCACCTCCCCGCAGCGGTCACCATCCCCTCTTCTGGGAC ACCCACCTCCCCGCAGCGGTTACCATCCCCTCTTCTGGGAC Direct Gain 0 0.982922649618464 0 0.250168442726135 prediction 0.965845299236928 Functional Gain - MAST4 ENSG00000069020 CDS Human protein_coding chr5:66459191 chr5:66459191 nonsynonymous SNV 0.548 3 21 hPsi_associated_SNPs_102197 0 0 0 0 0 Cytosol 0 0.438718123012565 0 0 hPsi_site_1157 iPseU_CNN:0;iRNA_PseU:0 1158 chr5 175111286 175111286 1 + C T LGG 175111286 + 175111266 175111306 41 GTGTGGAGTGGGACAGAAGTCACGGCCCCCCAGGGAGCCAC GTGTGGAGTGGGACAGAAGTTACGGCCCCCCAGGGAGCCAC Direct Gain 0 0.982896327511685 0 0.9996377825737 prediction 0.965792655023371 Functional Gain - HRH2 ENSG00000113749 CDS Human protein_coding chr5:175111286 chr5:175111286 synonymous SNV . 0 21 hPsi_associated_SNPs_102198 0 0 0 0 1 nucleus 0 0.439087288245843 0.9992755651474 0 hPsi_site_1158 iPseU_CNN:0.9992755651474;iRNA_PseU:0 1159 chr2 128183662 128183662 1 + G T UCEC 128183662 + 128183642 128183682 41 CCACCTCTGCCTACCTCAGTGAAGTTCCCTTGTGGGAGGCC CCACCTCTGCCTACCTCAGTTAAGTTCCCTTGTGGGAGGCC Direct Gain 0 0.982795753842028 0 0.999971568584442 prediction 0.965591507684056 Functional Gain - PROC ENSG00000115718 CDS Human protein_coding chr2:128183662 chr2:128183662 synonymous SNV . 0 21 hPsi_associated_SNPs_102199 0 0 0 0 1 nucleus 0 0.438717401541047 0.999943137168884 0 hPsi_site_1159 iPseU_CNN:0.999943137168884;iRNA_PseU:0 1160 chr20 30898981 30898981 1 + C A LIHC 30898981 - 30898961 30899001 41 GGGTACGGGTATGGTACCTTGATCTTGGCGCCCAGCATCTC GGGTACGGGTATGGTACCTTTATCTTGGCGCCCAGCATCTC Direct Gain 0 0.982582184216579 0 0.995736539363861 prediction 0.965164368433158 Functional Gain - KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898981 chr20:30898981 synonymous SNV . 0 21 hPsi_associated_SNPs_102200 0 0 0 0 0 Ribosome 0 0.438718299057455 0.991473078727722 0 hPsi_site_1160 iPseU_CNN:0.991473078727722;iRNA_PseU:0 1161 chr3 51624557 51624557 1 + G A CESC 51624557 - 51624537 51624577 41 ACCATCCAGCAGGTCTTCTTCATCATCCCTGTCACACTCCT ACCATCCAGCAGGTCTTCTTTATCATCCCTGTCACACTCCT Direct Gain 0 0.982571512566042 0 0.916301965713501 prediction 0.965143025132085 Functional Gain - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51624557 chr3:51624557 nonsynonymous SNV 0.902 1 21 hPsi_associated_SNPs_102201 0 0 0 0 0 chromatin 0 0.438699935932084 0.832603931427002 0 hPsi_site_1161 iPseU_CNN:0.832603931427002;iRNA_PseU:0 1162 chr14 74425743 74425743 1 + G A SARC 74425743 - 74425723 74425763 41 AGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCT AGCCACAACAGCAGACTGGTTATAGTTCCAGCTCACATTCT Direct Gain 0 0.982369341340085 0 0.760250687599182 prediction 0.964738682680169 Functional Gain - COQ6 ENSG00000119723 CDS Human protein_coding chr14:74425743 chr14:74425743 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_102202 0 0 0 1 0 Ribosome 0 0.439236045359191 0.520501375198364 0 hPsi_site_1162 iPseU_CNN:0.520501375198364;iRNA_PseU:0 1163 chr11 6898587 6898587 1 + C A rs112511001 6898587 - 6898567 6898607 41 GGAACAGGTGGAGAATGCCTGATGTTTCCCCTCAGCTGACG GGAACAGGTGGAGAATGCCTTATGTTTCCCCTCAGCTGACG Direct Gain 0 0.982319950207179 0 0.913790285587311 prediction 0.964639900414358 Functional Gain - OR10A4 ENSG00000170782 CDS Human protein_coding chr11:6898587 chr11:6898587 nonsynonymous SNV 0.946 0 21 hPsi_associated_SNPs_102203 0 0 0 0 0 exosome 0 0.438718664340381 0.827580571174622 0 hPsi_site_1163 iPseU_CNN:0.827580571174622;iRNA_PseU:0 1164 chr17 28890257 28890257 1 + G T SARC 28890257 + 28890237 28890277 41 AGAGCCAGACCCATTTGTGAGAGCCTCCACTCCTCCCTGCA AGAGCCAGACCCATTTGTGATAGCCTCCACTCCTCCCTGCA Direct Gain 0 0.982104111096555 0 0.99454140663147 prediction 0.96420822219311 Functional Gain - TBC1D29 ENSG00000266733 CDS Human protein_coding chr17:28890257 chr17:28890257 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_102204 0 0 0 0 1 exosome 0 0.438718584045819 0.98908281326294 0 hPsi_site_1164 iPseU_CNN:0.98908281326294;iRNA_PseU:0 1165 chr11 47282859 47282859 1 + C T ACC 47282859 + 47282839 47282879 41 GAGGAGGAACAGGCTCATGCCACATCCTTGCCCCCCAGGGC GAGGAGGAACAGGCTCATGCTACATCCTTGCCCCCCAGGGC Direct Gain 0 0.982067571782765 0 0.927381753921509 prediction 0.964135143565531 Functional Gain - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47282859 chr11:47282859 synonymous SNV . 0 21 hPsi_associated_SNPs_102205 0 0 0 0 1 Ribosome 0 0.438704022570344 0.854763507843018 0 hPsi_site_1165 iPseU_CNN:0.854763507843018;iRNA_PseU:0 1166 chr17 18682422 18682422 1 + G A SKCM 18682422 - 18682402 18682442 41 TGGTGCTCCTTCTCCTCCTTCACGGTCAACAGCACGAACTC TGGTGCTCCTTCTCCTCCTTTACGGTCAACAGCACGAACTC Direct Gain 0 0.982041016557726 0 0.999829947948456 prediction 0.964082033115451 Functional Gain - FBXW10 ENSG00000171931 CDS Human protein_coding chr17:18682422 chr17:18682422 synonymous SNV . 0 21 hPsi_associated_SNPs_102206 0 0 0 0 0 Nucleus 0 0.438696001840708 0.999659895896912 0 hPsi_site_1166 iPseU_CNN:0.999659895896912;iRNA_PseU:0 1167 chr2 45879213 45879213 1 + C A rs12615066 45879213 - 45879193 45879233 41 GGCGGGGAGTGGGGGCCGGGGTCACTCCGTCTGCCCCGAGG GGCGGGGAGTGGGGGCCGGGTTCACTCCGTCTGCCCCGAGG Direct Gain 0 0.982035851725943 0 0.999579191207886 prediction 0.964071703451886 Functional Gain - PRKCE ENSG00000171132 UTR5 Human protein_coding chr2:45879213 chr2:45879213 . . 0 21 hPsi_associated_SNPs_102207 0 0 0 0 0 chromatin 0 0.43905709420317 0.999158382415772 0 hPsi_site_1167 iPseU_CNN:0.999158382415772;iRNA_PseU:0 1168 chr12 78401054 78401054 1 + G T LUAD 78401054 + 78401034 78401074 41 GAAAGCAAGTGCTTCTAGTTGTCCTGCCCCTTTGGAAGGAA GAAAGCAAGTGCTTCTAGTTTTCCTGCCCCTTTGGAAGGAA Direct Gain 0 0.982014509050374 0 0.0604715645313263 prediction 0.964029018100748 Functional Gain - NAV3 ENSG00000067798 CDS Human protein_coding chr12:78401054 chr12:78401054 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_102208 0 0 0 0 0 Nucleus 0 0.43871859353131 0 0 hPsi_site_1168 iPseU_CNN:0;iRNA_PseU:0 1169 chr16 24578499 24578499 1 + C A LGG 24578499 - 24578479 24578519 41 ACGGGCCTTGAGTCCTCTGTGATCTTTCGCTGTGGTGTCGC ACGGGCCTTGAGTCCTCTGTTATCTTTCGCTGTGGTGTCGC Direct Gain 0 0.982010232320112 0 0.926194548606873 prediction 0.964020464640224 Functional Gain - RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24578499 chr16:24578499 stopgain 1.000 1 21 hPsi_associated_SNPs_102209 0 0 0 0 0 Cytosol 0 0.438149130211271 0.852389097213746 0 hPsi_site_1169 iPseU_CNN:0.852389097213746;iRNA_PseU:0 1170 chr1 65851414 65851414 1 + G T LUAD 65851414 + 65851394 65851434 41 GATACCTGGGCTATATGTGTGACCTACTGGCAGACAAGCCC GATACCTGGGCTATATGTGTTACCTACTGGCAGACAAGCCC Direct Gain 0 0.981996897798671 0 0.999094069004059 prediction 0.963993795597342 Functional Gain - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65851414 chr1:65851414 nonsynonymous SNV 0.976 5 21 hPsi_associated_SNPs_102210 0 0 1 0 1 Cytosol 0 0.438494960808599 0.998188138008118 0 hPsi_site_1170 iPseU_CNN:0.998188138008118;iRNA_PseU:0 1171 chr16 29990361 29990361 1 + C T UCEC 29990361 + 29990341 29990381 41 CGGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCACAACA CGGGGCGCTTCAGGGCCTGGTATATCTGCACTCCCACAACA Direct Gain 0 0.981963256743624 0 0.99940299987793 prediction 0.963926513487248 Functional Gain - TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29990361 chr16:29990361 nonsynonymous SNV 0.973 1 21 hPsi_associated_SNPs_102211 0 0 1 0 2 Nucleus 0 0.438723271601735 0.99880599975586 0 hPsi_site_1171 iPseU_CNN:0.99880599975586;iRNA_PseU:0 1172 chr7 92905495 92905495 1 + C T SKCM 92905495 + 92905475 92905515 41 AGACAGCAATGGATCAACTTCATATGCACTTCACCCAAGCC AGACAGCAATGGATCAACTTTATATGCACTTCACCCAAGCC Direct Gain 0 0.98187514007401 0 0.988569140434265 prediction 0.963750280148019 Functional Gain - VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905495 chr7:92905495 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102212 0 0 1 8 1 Cytosol 0 0.438710106600774 0.97713828086853 0 hPsi_site_1172 iPseU_CNN:0.97713828086853;iRNA_PseU:0 1173 chr15 25465687 25465687 1 + G A SKCM 25465687 - 25465667 25465707 41 ATTGAGCATGATTGTTAAGTCATCACCTCTTTTCAGGACAA ATTGAGCATGATTGTTAAGTTATCACCTCTTTTCAGGACAA Direct Gain 0 0.981851076606214 0 0.995309591293335 prediction 0.963702153212428 Functional Gain - SNORD115-27 ENSG00000201300 ncRNA_exonic Human snoRNA chr15:25465687 chr15:25465687 . . 0 21 hPsi_associated_SNPs_102213 0 0 0 0 0 unknown 0 0.438718409919064 0.99061918258667 0 hPsi_site_1173 iPseU_CNN:0.99061918258667;iRNA_PseU:0 1174 chr6 348179 348179 1 + G A UCEC 348179 - 348159 348199 41 AGCACGCACGGTGTGCAGGGCATCCTCCCAGCCAAAGTCAG AGCACGCACGGTGTGCAGGGTATCCTCCCAGCCAAAGTCAG Direct Gain 0 0.981800084677248 0 0.971589922904968 prediction 0.963600169354496 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348179 chr6:348179 nonsynonymous SNV 0.988 3 21 hPsi_associated_SNPs_102214 0 0 0 0 0 Ribosome 0 0.438718738699695 0.943179845809936 0 hPsi_site_1174 iPseU_CNN:0.943179845809936;iRNA_PseU:0 1175 chr17 3119068 3119068 1 + G T LIHC 3119068 + 3119048 3119088 41 TCGTCCTAGCCATTTGCTCTGATGTTCGCCTTCACAACCCC TCGTCCTAGCCATTTGCTCTTATGTTCGCCTTCACAACCCC Direct Gain 0 0.981799678553588 0 0.418225079774857 prediction 0.963599357107176 Functional Gain - OR1A1 ENSG00000172146 CDS Human protein_coding chr17:3119068 chr17:3119068 nonsynonymous SNV 0.002 3 21 hPsi_associated_SNPs_102215 0 0 0 0 0 unknown 0 0.438624308982175 0 0 hPsi_site_1175 iPseU_CNN:0;iRNA_PseU:0 1176 chr19 55594890 55594890 1 + G A CESC 55594890 - 55594870 55594910 41 CCCTGCTGTGTCGCTTGGGTCACCTGCCGGCGCCTCCGCTC CCCTGCTGTGTCGCTTGGGTTACCTGCCGGCGCCTCCGCTC Direct Gain 0 0.981731210063494 0 0.987748265266418 prediction 0.963462420126987 Functional Gain - EPS8L1 ENSG00000131037 CDS Human protein_coding chr19:55594890 chr19:55594890 synonymous SNV . 0 21 hPsi_associated_SNPs_102216 0 0 0 0 0 Cytosol 0 0.438690002040529 0.975496530532836 0 hPsi_site_1176 iPseU_CNN:0.975496530532836;iRNA_PseU:0 1177 chr11 70189808 70189808 1 + G A LUSC 70189808 - 70189788 70189828 41 CAAGACACTAGCTTGCTGGGCACGTTCCCAATCCTGCTCAT CAAGACACTAGCTTGCTGGGTACGTTCCCAATCCTGCTCAT Direct Gain 0 0.98167187172444 0 0.99991512298584 prediction 0.963343743448879 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70189808 chr11:70189808 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_102217 0 0 0 0 0 Ribosome 0 0.438717789048567 0.99983024597168 0 hPsi_site_1177 iPseU_CNN:0.99983024597168;iRNA_PseU:0 1178 chr10 3178987 3178987 1 + G A rs2388564 3178987 - 3178967 3179007 41 AAACAGAGGACTGTTGGAGTCATAGGCAAATGTTTAATTAA AAACAGAGGACTGTTGGAGTTATAGGCAAATGTTTAATTAA Direct Gain 0 0.981642424437258 0 0.999715745449066 prediction 0.963284848874517 Functional Gain - PFKP ENSG00000067057 intronic Human protein_coding chr10:3178987 chr10:3178987 . . 0 21 hPsi_associated_SNPs_102218 0 0 0 0 0 Nucleus 0 0.438857717674294 0.999431490898132 0 hPsi_site_1178 iPseU_CNN:0.999431490898132;iRNA_PseU:0 1179 chr5 52778834 52778834 1 + G A BLCA 52778834 - 52778814 52778854 41 TTGAAGAGTGTGTTGTCATTCACGTCCTCCTCGGTCCACGA TTGAAGAGTGTGTTGTCATTTACGTCCTCCTCGGTCCACGA Direct Gain 0 0.981550900602094 0 0.999991655349731 prediction 0.963101801204187 Functional Gain - FST ENSG00000134363 CDS Human protein_coding chr5:52778834 chr5:52778834 synonymous SNV . 0 21 hPsi_associated_SNPs_102219 0 0 0 0 0 nucleus 0 0.438708101849381 0.999983310699462 0 hPsi_site_1179 iPseU_CNN:0.999983310699462;iRNA_PseU:0 1180 chr9 140707940 140707940 1 + G T LUSC 140707940 + 140707920 140707960 41 TACGTCTCTCAGAACTGCGTGACGTCCCCCATGAACATCGA TACGTCTCTCAGAACTGCGTTACGTCCCCCATGAACATCGA Direct Gain 0 0.98154929356307 0 0.999970972537994 prediction 0.963098587126139 Functional Gain - EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140707940 chr9:140707940 synonymous SNV . 0 21 hPsi_associated_SNPs_102220 0 0 1 0 1 chromatin 0 0.438719098803327 0.999941945075988 0 hPsi_site_1180 iPseU_CNN:0.999941945075988;iRNA_PseU:0 1181 chr7 21882190 21882190 1 + G A SKCM 21882190 - 21882170 21882210 41 GCGAAAGTTCTTGTTAAATTCACATTCTTTATCTCCAATCC GCGAAAGTTCTTGTTAAATTTACATTCTTTATCTCCAATCC Direct Gain 0 0.981432481939752 0 0.987864851951599 prediction 0.962864963879503 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21882190 chr7:21882190 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_102221 0 0 0 0 0 nucleolus 0 0.439157318332501 0.975729703903198 0 hPsi_site_1181 iPseU_CNN:0.975729703903198;iRNA_PseU:0 1182 chr2 102478435 102478435 1 + G A rs146476749 102478435 - 102478415 102478455 41 CAAAGTGCTGGGATTTCAGGCACGTGCCACTGTGCCCCAGC CAAAGTGCTGGGATTTCAGGTACGTGCCACTGTGCCCCAGC Direct Gain 0 0.98139107495414 0 0.999999582767487 prediction 0.96278214990828 Functional Gain - MAP4K4 ENSG00000071054 intronic Human protein_coding chr2:102478435 chr2:102478435 . . 0 21 hPsi_associated_SNPs_102222 0 0 0 0 0 Ribosome 0 0.438484000267032 0.999999165534974 0 hPsi_site_1182 iPseU_CNN:0.999999165534974;iRNA_PseU:0 1183 chr7 72419548 72419548 1 + C T rs148249665 72419548 + 72419528 72419568 41 AAGGGAAAGTGAGCGCGTGGCACAGGGCTCGCTGCTGGAAC AAGGGAAAGTGAGCGCGTGGTACAGGGCTCGCTGCTGGAAC Direct Gain 0 0.981332446764185 0 0.552135765552521 prediction 0.962664893528369 Functional Gain - NSUN5P2 ENSG00000106133 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72419548 chr7:72419548 . . 0 21 hPsi_associated_SNPs_102223 0 0 0 0 0 unknown 0 0.438799059034276 0.104271531105042 0 hPsi_site_1183 iPseU_CNN:0.104271531105042;iRNA_PseU:0 1184 chr21 47551696 47551696 1 + C T rs2839123 47551696 + 47551676 47551716 41 GCAGTGCCGCCTGAAAGTGTCTTGGGCTAAGGACCCACACC GCAGTGCCGCCTGAAAGTGTTTTGGGCTAAGGACCCACACC Direct Gain 0 0.981280333208098 0 0.999996185302734 prediction 0.962560666416196 Functional Gain - COL6A2 ENSG00000142173 intronic Human protein_coding chr21:47551696 chr21:47551696 . . 0 21 hPsi_associated_SNPs_102224 0 0 0 0 0 Cytosol 0 0.438718593085482 0.999992370605468 0 hPsi_site_1184 iPseU_CNN:0.999992370605468;iRNA_PseU:0 1185 chr18 34310684 34310684 1 + C T UCEC 34310684 + 34310664 34310704 41 GTAACGCCATCAATATTGGTCTGACGGTGCTGCCCCCTCCA GTAACGCCATCAATATTGGTTTGACGGTGCTGCCCCCTCCA Direct Gain 0 0.981114421855293 0 0.997157096862793 prediction 0.962228843710586 Functional Gain - FHOD3 ENSG00000134775 CDS Human protein_coding chr18:34310684 chr18:34310684 synonymous SNV . 0 21 hPsi_associated_SNPs_102225 0 0 1 0 1 exosome 0 0.438898710144191 0.994314193725586 0 hPsi_site_1185 iPseU_CNN:0.994314193725586;iRNA_PseU:0 1186 chr13 32367008 32367008 1 + C T HNSC 32367008 + 32366988 32367028 41 ACTTTGGAGAAGTTCCTGGTCATTGTCTTCCCCTTCAGTAA ACTTTGGAGAAGTTCCTGGTTATTGTCTTCCCCTTCAGTAA Direct Gain 0 0.981104910694064 0 0.688315570354462 prediction 0.962209821388129 Functional Gain - RXFP2 ENSG00000133105 CDS Human protein_coding chr13:32367008 chr13:32367008 synonymous SNV . 0 21 hPsi_associated_SNPs_102226 0 0 0 0 0 exosome 0 0.438718717973128 0.376631140708924 0 hPsi_site_1186 iPseU_CNN:0.376631140708924;iRNA_PseU:0 1187 chrX 107169966 107169966 1 + C T LUSC 107169966 + 107169946 107169986 41 GATTGGCAAGAATGCCTCCTCATGGGTCTTCTCTCGCTGCA GATTGGCAAGAATGCCTCCTTATGGGTCTTCTCTCGCTGCA Direct Gain 0 0.980907347052989 0 0.996736764907837 prediction 0.961814694105978 Functional Gain - MID2 ENSG00000080561 CDS Human protein_coding chrX:107169966 chrX:107169966 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102227 0 0 1 0 1 nucleus 0 0.437969279334192 0.993473529815674 0 hPsi_site_1187 iPseU_CNN:0.993473529815674;iRNA_PseU:0 1188 chr3 9985646 9985646 1 + C T BLCA 9985646 + 9985626 9985666 41 CCGACGCTGGAAGTTGGGTTCTCATCCCCACTCTACATATG CCGACGCTGGAAGTTGGGTTTTCATCCCCACTCTACATATG Direct Gain 0 0.98083922567855 0 0.66535359621048 prediction 0.9616784513571 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9985646 chr3:9985646 nonsynonymous SNV 0.031 0 21 hPsi_associated_SNPs_102228 0 0 1 0 1 chromatin 0 0.438718592994198 0.33070719242096 0 hPsi_site_1188 iPseU_CNN:0.33070719242096;iRNA_PseU:0 1189 chr14 102808186 102808186 1 + G A UCEC 102808186 - 102808166 102808206 41 GGCTGAGGCCCTGGCTTGGGCACAGTCCTGTAGGCACAGTC GGCTGAGGCCCTGGCTTGGGTACAGTCCTGTAGGCACAGTC Direct Gain 0 0.980835221504304 0 0.999999403953552 prediction 0.961670443008608 Functional Gain - ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102808186 chr14:102808186 synonymous SNV . 0 21 hPsi_associated_SNPs_102229 0 0 0 0 0 chromatin 0 0.438718575652426 0.999998807907104 0 hPsi_site_1189 iPseU_CNN:0.999998807907104;iRNA_PseU:0 1190 chr12 51319271 51319271 1 + G A rs187795455 51319271 - 51319251 51319291 41 AGAATCCGCTCCTGGTTCTTCACAGAGCACAGCACCAGGGT AGAATCCGCTCCTGGTTCTTTACAGAGCACAGCACCAGGGT Direct Gain 0 0.980828550139519 0 0.998981714248657 prediction 0.961657100279039 Functional Gain - METTL7A ENSG00000185432 CDS Human protein_coding chr12:51319271 chr12:51319271 synonymous SNV . 0 21 hPsi_associated_SNPs_102230 0 0 0 0 0 Endoplasmic reticulum 0 0.43871860191666 0.997963428497314 0 hPsi_site_1190 iPseU_CNN:0.997963428497314;iRNA_PseU:0 1191 chr1 147380823 147380823 1 + T A rs80358202 147380823 - 147380803 147380843 41 GAGTGGAGGGATTTCTCAGGAATCTCCCCCAGGGGCTGCTC GAGTGGAGGGATTTCTCAGGTATCTCCCCCAGGGGCTGCTC Direct Gain 0 0.980726375688577 0 0.999971985816956 prediction 0.961452751377154 Functional Gain - GJA8 ENSG00000121634 CDS Human protein_coding chr1:147380823 chr1:147380823 synonymous SNV . 0 21 hPsi_associated_SNPs_102231 0 0 0 0 0 unknown 0 0.438718584699872 0.999943971633912 0 hPsi_site_1191 iPseU_CNN:0.999943971633912;iRNA_PseU:0 1192 chr17 78092138 78092138 1 + C T SKCM 78092138 + 78092118 78092158 41 CGAGGGGCCTACACACAGGTCATCTTCCTGGCCAGGAATGT CGAGGGGCCTACACACAGGTTATCTTCCTGGCCAGGAATGT Direct Gain 0 0.98056838115102 0 0.999959230422974 prediction 0.961136762302039 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78092138 chr17:78092138 synonymous SNV . 0 21 hPsi_associated_SNPs_102232 0 0 1 0 1 Endoplasmic reticulum 0 0.440913784369369 0.999918460845948 0 hPsi_site_1192 iPseU_CNN:0.999918460845948;iRNA_PseU:0 1193 chr19 21300002 21300002 1 + G A STAD 21300002 - 21299982 21300022 41 GAACCGCTTAAACACTTTGTCACATTCTTCACATTGGTAAG GAACCGCTTAAACACTTTGTTACATTCTTCACATTGGTAAG Direct Gain 0 0.980479878087453 0 0.999994039535522 prediction 0.960959756174905 Functional Gain - ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300002 chr19:21300002 nonsynonymous SNV 0.412 0 21 hPsi_associated_SNPs_102233 0 0 0 0 0 Cytosol 0 0.438711561723452 0.999988079071044 0 hPsi_site_1193 iPseU_CNN:0.999988079071044;iRNA_PseU:0 1194 chr8 98991128 98991128 1 + G A UCEC 98991128 - 98991108 98991148 41 ACATCCGTGGTTTTCTGAGGCACAGTAGTCCACAGCTGGAG ACATCCGTGGTTTTCTGAGGTACAGTAGTCCACAGCTGGAG Direct Gain 0 0.980418499501779 0 0.961361765861511 prediction 0.960836999003557 Functional Gain - MATN2 ENSG00000132561 CDS Human protein_coding chr8:98991128 chr8:98991128 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_102234 0 0 0 0 0 Cytosol 0 0.438732244389619 0.922723531723022 0 hPsi_site_1194 iPseU_CNN:0.922723531723022;iRNA_PseU:0 1195 chr7 56051451 56051451 1 + G T LUAD 56051451 + 56051431 56051471 41 AATTTCGTAAGGCAAGAAGTGACATGCTTCTCTCCAGGAAG AATTTCGTAAGGCAAGAAGTTACATGCTTCTCTCCAGGAAG Direct Gain 0 0.980365771316231 0 0.999955892562866 prediction 0.960731542632463 Functional Gain - NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56051451 chr7:56051451 nonsynonymous SNV 0.980 0 21 hPsi_associated_SNPs_102235 0 0 1 0 1 unknown 0 0.438713576978662 0.999911785125732 0 hPsi_site_1195 iPseU_CNN:0.999911785125732;iRNA_PseU:0 1196 chr12 27954828 27954828 1 + C T rs11614346 27954828 + 27954808 27954848 41 GAATACAGACATAAATAAGTCACGGCCCATGACCTTGAAGA GAATACAGACATAAATAAGTTACGGCCCATGACCTTGAAGA Direct Gain 0 0.980351679089783 0 0.946848273277283 prediction 0.960703358179565 Functional Gain - KLHL42 ENSG00000087448 UTR3 Human protein_coding chr12:27954828 chr12:27954828 . . 0 21 hPsi_associated_SNPs_102236 0 0 1 0 0 Ribosome 0 0.438719523778298 0.893696546554566 0 hPsi_site_1196 iPseU_CNN:0.893696546554566;iRNA_PseU:0 1197 chrX 49142338 49142338 1 + G T ACC 49142338 + 49142318 49142358 41 GCAACCCCGCAGAAGAAGGTGATGTCCCCAGAAGCAGTCCA GCAACCCCGCAGAAGAAGGTTATGTCCCCAGAAGCAGTCCA Direct Gain 0 0.980237336832082 0 0.982656300067902 prediction 0.960474673664164 Functional Gain - PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49142338 chrX:49142338 nonsynonymous SNV 0.982 3 21 hPsi_associated_SNPs_102237 0 0 0 0 1 Endoplasmic reticulum 0 0.438718602071355 0.965312600135804 0 hPsi_site_1197 iPseU_CNN:0.965312600135804;iRNA_PseU:0 1198 chrX 140969483 140969483 1 + G A CESC 140969483 - 140969463 140969503 41 ATCAGGAGGCGGTTCTGGGGCATGCCCTGCTCATCACTCAG ATCAGGAGGCGGTTCTGGGGTATGCCCTGCTCATCACTCAG Direct Gain 0 0.980227073272824 0 0.59494537115097 prediction 0.960454146545647 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140969483 chrX:140969483 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_102238 0 0 0 0 0 exosome 0 0.438826864630724 0.18989074230194 0 hPsi_site_1198 iPseU_CNN:0.18989074230194;iRNA_PseU:0 1199 chr19 55144601 55144601 1 + G A OV 55144601 - 55144581 55144621 41 TGATCTTAGACGCCATGGGTCATCAGCTGCCCCCTCCTTGG TGATCTTAGACGCCATGGGTTATCAGCTGCCCCCTCCTTGG Direct Gain 0 0.980203095478099 0 0.996405363082886 prediction 0.960406190956197 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55144601 chr19:55144601 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_102239 0 0 0 0 0 exosome 0 0.438718503536601 0.992810726165772 0 hPsi_site_1199 iPseU_CNN:0.992810726165772;iRNA_PseU:0 1200 chr20 8639324 8639324 1 + G A SKCM 8639324 - 8639304 8639344 41 GGCGAGGCTGTTGTTGGGTTCATACTTCTCAATCAATACTT GGCGAGGCTGTTGTTGGGTTTATACTTCTCAATCAATACTT Direct Gain 0 0.980201649464584 0 0.992395997047424 prediction 0.960403298929168 Functional Gain - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8639324 chr20:8639324 nonsynonymous SNV 0.918 3 21 hPsi_associated_SNPs_102240 0 0 0 0 0 Nucleus 0 0.438741921709635 0.984791994094848 0 hPsi_site_1200 iPseU_CNN:0.984791994094848;iRNA_PseU:0 1201 chr10 31750085 31750085 1 + G T LUSC 31750085 + 31750065 31750105 41 GTGAAGGTGTACCAGAGGATGACCTGCCAACAGACCAGACA GTGAAGGTGTACCAGAGGATTACCTGCCAACAGACCAGACA Direct Gain 0 0.980165635053714 0 0.987019538879395 prediction 0.960331270107428 Functional Gain - ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31750085 chr10:31750085 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_102241 0 0 1 0 1 Nucleus 0 0.442133969981204 0.97403907775879 0 hPsi_site_1201 iPseU_CNN:0.97403907775879;iRNA_PseU:0 1202 chr16 31429636 31429636 1 + C T UCEC 31429636 + 31429616 31429656 41 CCTCAGGGCACCTTCATAGTCACATTCGATGTCTCCTACAA CCTCAGGGCACCTTCATAGTTACATTCGATGTCTCCTACAA Direct Gain 0 0.980153666293273 0 1 prediction 0.960307332586547 Functional Gain - ITGAD ENSG00000156886 CDS Human protein_coding chr16:31429636 chr16:31429636 synonymous SNV . 0 21 hPsi_associated_SNPs_102242 0 0 0 0 2 nucleolus 0 0.438684249886674 1 0 hPsi_site_1202 iPseU_CNN:1;iRNA_PseU:0 1203 chr5 31318085 31318085 1 + T A LUSC 31318085 - 31318065 31318105 41 TAAATCTAGAGTGTCACAGTAACAGTGTGAGCCCCTCACCA TAAATCTAGAGTGTCACAGTTACAGTGTGAGCCCCTCACCA Direct Gain 0 0.980135635806085 0 0.983371913433075 prediction 0.960271271612171 Functional Gain - CDH6 ENSG00000113361 CDS Human protein_coding chr5:31318085 chr5:31318085 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_102243 0 0 0 0 0 exosome 0 0.438476559784695 0.96674382686615 0 hPsi_site_1203 iPseU_CNN:0.96674382686615;iRNA_PseU:0 1204 chr4 8229089 8229089 1 + C T BLCA 8229089 + 8229069 8229109 41 GCCAAGAAAGCTGGCCTCCTCATGGCCCTGGCCAGGCTCTG GCCAAGAAAGCTGGCCTCCTTATGGCCCTGGCCAGGCTCTG Direct Gain 0 0.980130351969616 0 0.940902650356293 prediction 0.960260703939231 Functional Gain - SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8229089 chr4:8229089 synonymous SNV . 0 21 hPsi_associated_SNPs_102244 0 0 1 0 0 cytosol 0 0.438718590202055 0.881805300712586 0 hPsi_site_1204 iPseU_CNN:0.881805300712586;iRNA_PseU:0 1205 chr8 27312093 27312093 1 + C A LUAD 27312093 - 27312073 27312113 41 TGACGGCAAGGAAGGCAGGAGATCATCCACGCTCCCGATGA TGACGGCAAGGAAGGCAGGATATCATCCACGCTCCCGATGA Direct Gain 0 0.980031954105455 0 0.999823570251465 prediction 0.96006390821091 Functional Gain - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27312093 chr8:27312093 nonsynonymous SNV 0.850 0 21 hPsi_associated_SNPs_102245 0 0 0 0 0 chromatin 0 0.438732440033893 0.99964714050293 0 hPsi_site_1205 iPseU_CNN:0.99964714050293;iRNA_PseU:0 1206 chr19 38973699 38973699 1 + C T BLCA 38973699 + 38973679 38973719 41 ACTAAGCTATTTCCTGCCGTCTTCGTCCTGCCCACCCACCA ACTAAGCTATTTCCTGCCGTTTTCGTCCTGCCCACCCACCA Direct Gain 0 0.979969552369567 0 0.00517287850379944 prediction 0.959939104739133 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:38973699 chr19:38973699 synonymous SNV . 0 21 hPsi_associated_SNPs_102246 0 0 0 0 2 chromatin 0 0.438718549870853 0 0 hPsi_site_1206 iPseU_CNN:0;iRNA_PseU:0 1207 chr11 34139990 34139990 1 + G A BLCA 34139990 - 34139970 34140010 41 GGCTGGGTGTCCTGCAAGCTCTCCTTCAACTCCCTCAGCTC GGCTGGGTGTCCTGCAAGCTTTCCTTCAACTCCCTCAGCTC Direct Gain 0 0.9799451227927 0 0.999645113945007 prediction 0.959890245585401 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34139990 chr11:34139990 synonymous SNV . 0 21 hPsi_associated_SNPs_102247 0 0 0 0 0 chromatin 0 0.438718604468057 0.999290227890014 0 hPsi_site_1207 iPseU_CNN:0.999290227890014;iRNA_PseU:0 1208 chr13 24168835 24168835 1 + C T rs147807560 24168835 + 24168815 24168855 41 GTGGGTGCAGCTTCAGCAGACTTAAACGTTCCTGCCTGCCA GTGGGTGCAGCTTCAGCAGATTTAAACGTTCCTGCCTGCCA Direct Gain 0 0.979877669192895 0 0.999967932701111 prediction 0.95975533838579 Functional Gain - TNFRSF19 ENSG00000127863 intronic Human protein_coding chr13:24168835 chr13:24168835 . . 0 21 hPsi_associated_SNPs_102248 0 0 0 1 0 cytosol 0 0.438652357319736 0.999935865402222 0 hPsi_site_1208 iPseU_CNN:0.999935865402222;iRNA_PseU:0 1209 chr7 149558265 149558265 1 + G T COAD 149558265 + 149558245 149558285 41 ACAGCAGATGGGTACTTCGAGACCATCGTTTCTGCCCTGGA ACAGCAGATGGGTACTTCGATACCATCGTTTCTGCCCTGGA Direct Gain 0 0.979844461686284 0 0.999999821186066 prediction 0.959688923372568 Functional Gain - ZNF862 ENSG00000106479 CDS Human protein_coding chr7:149558265 chr7:149558265 nonsynonymous SNV 0.905 3 21 hPsi_associated_SNPs_102249 0 0 0 0 0 exosome 0 0.438744502103193 0.999999642372132 0 hPsi_site_1209 iPseU_CNN:0.999999642372132;iRNA_PseU:0 1210 chr22 24122672 24122672 1 + C T SKCM 24122672 + 24122652 24122692 41 CACGAGGGCCGTGCTGACATCATGATCGACTTCGCCAGGTG CACGAGGGCCGTGCTGACATTATGATCGACTTCGCCAGGTG Direct Gain 0 0.979820002061167 0 0.993617534637451 prediction 0.959640004122334 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24122672 chr22:24122672 synonymous SNV . 0 21 hPsi_associated_SNPs_102250 0 0 0 1 1 Endoplasmic reticulum 0 0.437457631618526 0.987235069274902 0 hPsi_site_1210 iPseU_CNN:0.987235069274902;iRNA_PseU:0 1211 chr8 101252722 101252722 1 + C A BLCA 101252722 - 101252702 101252742 41 GTTTCTCAGGGTCTTCTGGTGACCTGCTGCTTTTGCCTCCC GTTTCTCAGGGTCTTCTGGTTACCTGCTGCTTTTGCCTCCC Direct Gain 0 0.979754991145067 0 0.99624365568161 prediction 0.959509982290134 Functional Gain - SPAG1 ENSG00000104450 CDS Human protein_coding chr8:101252722 chr8:101252722 stopgain 0.005 0 21 hPsi_associated_SNPs_102251 0 0 0 0 0 chromatin 0 0.438795284979605 0.99248731136322 0 hPsi_site_1211 iPseU_CNN:0.99248731136322;iRNA_PseU:0 1212 chr11 77532207 77532207 1 + C A rs535373455 77532207 - 77532187 77532227 41 CGCTCCCAGCGCTGCTTCGGGATCTGCGCTCCCCAACTGCC CGCTCCCAGCGCTGCTTCGGTATCTGCGCTCCCCAACTGCC Direct Gain 0 0.979688754523932 0 0.989021897315979 prediction 0.959377509047863 Functional Gain - AAMDC ENSG00000087884 UTR5 Human protein_coding chr11:77532207 chr11:77532207 . . 0 21 hPsi_associated_SNPs_102252 0 0 0 0 0 Ribosome 0 0.438322939061692 0.978043794631958 0 hPsi_site_1212 iPseU_CNN:0.978043794631958;iRNA_PseU:0 1213 chr9 35606896 35606896 1 + C T BLCA 35606896 + 35606876 35606916 41 GAACCCCTGTCCTGGCCGGTCAGGCTCCACCTGGCCCTGGA GAACCCCTGTCCTGGCCGGTTAGGCTCCACCTGGCCCTGGA Direct Gain 0 0.979643723982331 0 0.992143869400024 prediction 0.959287447964662 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35606896 chr9:35606896 synonymous SNV . 0 21 hPsi_associated_SNPs_102253 0 0 1 0 2 Cytosol 0 0.438706896998775 0.984287738800048 0 hPsi_site_1213 iPseU_CNN:0.984287738800048;iRNA_PseU:0 1214 chr2 33752338 33752338 1 + C T COAD 33752338 + 33752318 33752358 41 GACTTGATAGCTGTCCATGTCATTTTCCCAGACTGGACAGA GACTTGATAGCTGTCCATGTTATTTTCCCAGACTGGACAGA Direct Gain 0 0.979618475276974 0 0.998435497283936 prediction 0.959236950553948 Functional Gain - RASGRP3 ENSG00000152689 CDS Human protein_coding chr2:33752338 chr2:33752338 synonymous SNV . 0 21 hPsi_associated_SNPs_102254 0 0 0 0 0 cytosol 0 0.43877136003595 0.996870994567872 0 hPsi_site_1214 iPseU_CNN:0.996870994567872;iRNA_PseU:0 1215 chr6 87725277 87725277 1 + C T SKCM 87725277 + 87725257 87725297 41 CTCCTGGTGGCAGTGCTCGTCATGCCCCTGAGCATCATCTA CTCCTGGTGGCAGTGCTCGTTATGCCCCTGAGCATCATCTA Direct Gain 0 0.979559972208928 0 0.872731804847717 prediction 0.959119944417856 Functional Gain - HTR1E ENSG00000168830 CDS Human protein_coding chr6:87725277 chr6:87725277 synonymous SNV . 0 21 hPsi_associated_SNPs_102255 0 0 0 0 0 unknown 0 0.438718878489232 0.745463609695434 0 hPsi_site_1215 iPseU_CNN:0.745463609695434;iRNA_PseU:0 1216 chr7 45753488 45753488 1 + G T LUSC 45753488 + 45753468 45753508 41 GAGAGCTGGCCTTCAGGGCAGACGTCCCCCCGTGTGCCCCA GAGAGCTGGCCTTCAGGGCATACGTCCCCCCGTGTGCCCCA Direct Gain 0 0.979548306507208 0 0.999977350234985 prediction 0.959096613014416 Functional Gain - ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45753488 chr7:45753488 nonsynonymous SNV 0.950 2 21 hPsi_associated_SNPs_102256 0 0 0 0 0 Nucleus 0 0.439688618450579 0.99995470046997 0 hPsi_site_1216 iPseU_CNN:0.99995470046997;iRNA_PseU:0 1217 chr7 150935717 150935717 1 + G A STAD 150935717 - 150935697 150935737 41 GAGAGCCATAGCCAGCTGGGCACGGCCCCCTAGCCCCTCCA GAGAGCCATAGCCAGCTGGGTACGGCCCCCTAGCCCCTCCA Direct Gain 0 0.979525101716843 0 0.99999874830246 prediction 0.959050203433685 Functional Gain - CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150935717 chr7:150935717 nonsynonymous SNV 0.993 0 21 hPsi_associated_SNPs_102257 0 0 0 0 0 Nucleus 0 0.438717748616821 0.99999749660492 0 hPsi_site_1217 iPseU_CNN:0.99999749660492;iRNA_PseU:0 1218 chrX 67944667 67944667 1 + C T rs773016626 67944667 + 67944647 67944687 41 AGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCT AGACTGAGAGGGCAAGCCGTTTTGTTTGCTGCAAGGATGCT Direct Gain 0 0.979524230096317 0 0.999953150749207 prediction 0.959048460192634 Functional Gain - STARD8 ENSG00000130052 UTR3 Human protein_coding chrX:67944667 chrX:67944667 . . 0 21 hPsi_associated_SNPs_102258 0 0 0 0 0 chromatin 0 0.438717420412041 0.999906301498414 0 hPsi_site_1218 iPseU_CNN:0.999906301498414;iRNA_PseU:0 1219 chr17 30376255 30376255 1 + G A UCEC 30376255 - 30376235 30376275 41 TGTTCGCAACATGAGCTTGGCACAGCTCCCTTGCACATGTG TGTTCGCAACATGAGCTTGGTACAGCTCCCTTGCACATGTG Direct Gain 0 0.979512686404855 0 0.969100713729858 prediction 0.959025372809709 Functional Gain - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30376255 chr17:30376255 nonsynonymous SNV 0.120 2 21 hPsi_associated_SNPs_102259 0 0 0 0 0 chromatin 0 0.438639613417588 0.938201427459716 0 hPsi_site_1219 iPseU_CNN:0.938201427459716;iRNA_PseU:0 1220 chr17 9583641 9583641 1 + G A LUSC 9583641 - 9583621 9583661 41 TGAGGGAGGAACTTGAAAGGCATACACATTATCTCCCTCTG TGAGGGAGGAACTTGAAAGGTATACACATTATCTCCCTCTG Direct Gain 0 0.979454113468457 0 0.997351169586182 prediction 0.958908226936913 Functional Gain - USP43 ENSG00000154914 CDS Human protein_coding chr17:9583641 chr17:9583641 nonsynonymous SNV 0.965 4 21 hPsi_associated_SNPs_102260 0 0 0 0 0 cytosol 0 0.438718527069751 0.994702339172364 0 hPsi_site_1220 iPseU_CNN:0.994702339172364;iRNA_PseU:0 1221 chr10 8100479 8100479 1 + C T BLCA 8100479 + 8100459 8100499 41 CACGCCAGCCCGCACCTCTTCACCTTCCCGCCCACCCCGCC CACGCCAGCCCGCACCTCTTTACCTTCCCGCCCACCCCGCC Direct Gain 0 0.979427105281116 0 0.999974489212036 prediction 0.958854210562233 Functional Gain - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8100479 chr10:8100479 synonymous SNV . 0 21 hPsi_associated_SNPs_102261 0 0 0 0 0 Cytosol 0 0.438717711760334 0.999948978424072 0 hPsi_site_1221 iPseU_CNN:0.999948978424072;iRNA_PseU:0 1222 chr10 134594376 134594376 1 + C T COAD 134594376 + 134594356 134594396 41 GAGAGCGAGGAGAAGGTTGTCACCTATGACCACATTGGGCC GAGAGCGAGGAGAAGGTTGTTACCTATGACCACATTGGGCC Direct Gain 0 0.979424344756147 0 0.99934196472168 prediction 0.958848689512294 Functional Gain - INPP5A ENSG00000068383 CDS Human protein_coding chr10:134594376 chr10:134594376 synonymous SNV . 0 21 hPsi_associated_SNPs_102262 0 0 1 0 2 Nucleus 0 0.43861915954727 0.99868392944336 0 hPsi_site_1222 iPseU_CNN:0.99868392944336;iRNA_PseU:0 1223 chr20 57876610 57876610 1 + G A BLCA 57876610 - 57876590 57876630 41 CCCTGCAGTGCTGTCGGGGCCACAGTCCCCTCGCCAGGGCC CCCTGCAGTGCTGTCGGGGCTACAGTCCCCTCGCCAGGGCC Direct Gain 0 0.979396559028125 0 0.582813501358032 prediction 0.95879311805625 Functional Gain - EDN3 ENSG00000124205 CDS Human protein_coding chr20:57876610 chr20:57876610 synonymous SNV . 0 21 hPsi_associated_SNPs_102263 0 0 0 0 0 exosome 0 0.438716305826444 0.165627002716064 0 hPsi_site_1223 iPseU_CNN:0.165627002716064;iRNA_PseU:0 1224 chr19 55143514 55143514 1 + G A BLCA 55143514 - 55143494 55143534 41 GTTCAGGCATTGTGGGTGTTCATCTTCTCCTTCCTTACACA GTTCAGGCATTGTGGGTGTTTATCTTCTCCTTCCTTACACA Direct Gain 0 0.979396154325181 0 0.12141364812851 prediction 0.958792308650361 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55143514 chr19:55143514 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102264 0 0 0 0 0 exosome 0 0.438719772783667 0 0 hPsi_site_1224 iPseU_CNN:0;iRNA_PseU:0 1225 chr7 21901560 21901560 1 + C A UCEC 21901560 - 21901540 21901580 41 TAGAGGAAGACAGCATGGGTGATGCTCTCCATCAGGATAGA TAGAGGAAGACAGCATGGGTTATGCTCTCCATCAGGATAGA Direct Gain 0 0.979393714329721 0 0.999942004680634 prediction 0.958787428659442 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21901560 chr7:21901560 synonymous SNV . 0 21 hPsi_associated_SNPs_102265 0 0 0 0 0 nucleolus 0 0.436475713267882 0.999884009361268 0 hPsi_site_1225 iPseU_CNN:0.999884009361268;iRNA_PseU:0 1226 chr20 43344036 43344036 1 + G A LIHC 43344036 - 43344016 43344056 41 GGTGGGTCTTCGGTGTGCCTCTCATGTCCCCTGCAGAGCCA GGTGGGTCTTCGGTGTGCCTTTCATGTCCCCTGCAGAGCCA Direct Gain 0 0.979383726121991 0 0.00271391868591309 prediction 0.958767452243982 Functional Gain - WISP2 ENSG00000064205 CDS Human protein_coding chr20:43344036 chr20:43344036 nonsynonymous SNV 0.831 1 21 hPsi_associated_SNPs_102266 0 0 0 0 0 nucleus 0 0.438663507673175 0 0 hPsi_site_1226 iPseU_CNN:0;iRNA_PseU:0 1227 chr19 36036644 36036644 1 + G A BLCA 36036644 - 36036624 36036664 41 TTCCCGAAGTGAAACAGGGTCATGATGCCGGCCGCCCGGTC TTCCCGAAGTGAAACAGGGTTATGATGCCGGCCGCCCGGTC Direct Gain 0 0.979325415081474 0 0.996286273002625 prediction 0.958650830162948 Functional Gain - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36036644 chr19:36036644 nonsynonymous SNV 0.984 2 21 hPsi_associated_SNPs_102267 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593001224 0.99257254600525 0 hPsi_site_1227 iPseU_CNN:0.99257254600525;iRNA_PseU:0 1228 chr19 40199918 40199918 1 + G T UCEC 40199918 + 40199898 40199938 41 AGATGCTGCAAGTCTTCAGAGATATCTCCCTGACCAGAGTG AGATGCTGCAAGTCTTCAGATATATCTCCCTGACCAGAGTG Direct Gain 0 0.979322003212838 0 0.0377371907234192 prediction 0.958644006425675 Functional Gain - LGALS14 ENSG00000006659 CDS Human protein_coding chr19:40199918 chr19:40199918 nonsynonymous SNV 0.008 3 21 hPsi_associated_SNPs_102268 0 0 0 0 1 exosome 0 0.438719291220257 0 0 hPsi_site_1228 iPseU_CNN:0;iRNA_PseU:0 1229 chr2 6118222 6118222 1 + G A rs76687250 6118222 - 6118202 6118242 41 AAAATCAGATCCTAATTTGTCTTCAACCTCCTGGCTGCAAA AAAATCAGATCCTAATTTGTTTTCAACCTCCTGGCTGCAAA Direct Gain 0 0.979283581044418 0 0.999330818653107 prediction 0.958567162088836 Functional Gain - LINC01105 ENSG00000232044 ncRNA_intronic Human processed_transcript chr2:6118222 chr2:6118222 . . 0 21 hPsi_associated_SNPs_102269 0 0 0 0 0 unknown 0 0.438718433239323 0.998661637306214 0 hPsi_site_1229 iPseU_CNN:0.998661637306214;iRNA_PseU:0 1230 chr11 67818101 67818101 1 + C A HNSC 67818101 - 67818081 67818121 41 GCAGGGCGTGCAGGAAGGCTGAGAGTCCCTCCATCACCAGC GCAGGGCGTGCAGGAAGGCTTAGAGTCCCTCCATCACCAGC Direct Gain 0 0.97925902087177 0 0.99998551607132 prediction 0.958518041743539 Functional Gain - TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818101 chr11:67818101 stopgain 0.986 1 21 hPsi_associated_SNPs_102270 0 0 0 0 0 Nucleus 0 0.438731085346451 0.99997103214264 0 hPsi_site_1230 iPseU_CNN:0.99997103214264;iRNA_PseU:0 1231 chr12 108082573 108082573 1 + G A BLCA 108082573 - 108082553 108082593 41 GTGGATAAACTAACCTGGGTCACCTTCCTCATCATATTTAT GTGGATAAACTAACCTGGGTTACCTTCCTCATCATATTTAT Direct Gain 0 0.979249437313561 0 0.999998331069946 prediction 0.958498874627122 Functional Gain - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082573 chr12:108082573 nonsynonymous SNV 0.365 0 21 hPsi_associated_SNPs_102271 0 0 0 0 0 Ribosome 0 0.438718593455789 0.999996662139892 0 hPsi_site_1231 iPseU_CNN:0.999996662139892;iRNA_PseU:0 1232 chr17 53150360 53150360 1 + G A CESC 53150360 - 53150340 53150380 41 TAACAGACGGATCACTTCTTCATAGTCCATTTCCATTCCAT TAACAGACGGATCACTTCTTTATAGTCCATTTCCATTCCAT Direct Gain 0 0.979180120398716 0 0.910774946212769 prediction 0.958360240797433 Functional Gain - STXBP4 ENSG00000166263 CDS Human protein_coding chr17:53150360 chr17:53150360 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102272 0 0 0 0 0 chromatin 0 0.438626626390715 0.821549892425538 0 hPsi_site_1232 iPseU_CNN:0.821549892425538;iRNA_PseU:0 1233 chr18 55143862 55143862 1 + C T SKCM 55143862 + 55143842 55143882 41 ACAACCGTCAGCAACTTCTTCATGAACGCCCGGCGCCGCAG ACAACCGTCAGCAACTTCTTTATGAACGCCCGGCGCCGCAG Direct Gain 0 0.979176869774566 0 0.998941540718079 prediction 0.958353739549132 Functional Gain - ONECUT2 ENSG00000119547 CDS Human protein_coding chr18:55143862 chr18:55143862 synonymous SNV . 0 21 hPsi_associated_SNPs_102273 0 0 1 0 0 nucleus 0 0.438720292618532 0.997883081436158 0 hPsi_site_1233 iPseU_CNN:0.997883081436158;iRNA_PseU:0 1234 chr17 7578227 7578227 1 + C T BLCA 7578227 + 7578207 7578247 41 ATGTCGAAAAGTGTTTCTGTCATCCAAATACTCCACACGCA ATGTCGAAAAGTGTTTCTGTTATCCAAATACTCCACACGCA Direct Gain 0 0.979083199528759 0 0.994752168655396 prediction 0.958166399057517 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578227 chr17:7578227 nonsynonymous SNV 0.720 5 21 hPsi_associated_SNPs_102274 0 0 0 0 0 Ribosome 0 0.438673397504244 0.989504337310792 0 hPsi_site_1234 iPseU_CNN:0.989504337310792;iRNA_PseU:0 1235 chr3 77600071 77600071 1 + T A OV 77600071 - 77600051 77600091 41 TAAAGCCTGGCAGATGTAGTAACCCGCGTCGGAACGTTGAA TAAAGCCTGGCAGATGTAGTTACCCGCGTCGGAACGTTGAA Direct Gain 0 0.979046193655865 0 0.169949233531952 prediction 0.958092387311729 Functional Gain - ROBO2 ENSG00000185008 CDS Human protein_coding chr3:77600071 chr3:77600071 nonsynonymous SNV 0.983 4 21 hPsi_associated_SNPs_102275 0 0 0 0 0 Endoplasmic reticulum 0 0.438880112275903 0 0 hPsi_site_1235 iPseU_CNN:0;iRNA_PseU:0 1236 chr1 32560490 32560490 1 + G A BLCA 32560490 - 32560470 32560510 41 GGCGGCCTTGTGCAGCAGGTCACAGTAGCTGGCAGGCAGCA GGCGGCCTTGTGCAGCAGGTTACAGTAGCTGGCAGGCAGCA Direct Gain 0 0.97897191707679 0 0.994476616382599 prediction 0.95794383415358 Functional Gain - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32560490 chr1:32560490 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102276 0 0 0 0 0 chromatin 0 0.438727687904806 0.988953232765198 0 hPsi_site_1236 iPseU_CNN:0.988953232765198;iRNA_PseU:0 1237 chr15 34032171 34032171 1 + G A LUSC 34032171 - 34032151 34032191 41 GGTGTTAATAGGTTTTGGGTCAAAGTTGCCATCCGCATCCA GGTGTTAATAGGTTTTGGGTTAAAGTTGCCATCCGCATCCA Direct Gain 0 0.978971890113496 0 0.999994277954102 prediction 0.957943780226993 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:34032171 chr15:34032171 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102277 0 0 0 0 0 exosome 0 0.438718517012326 0.999988555908204 0 hPsi_site_1237 iPseU_CNN:0.999988555908204;iRNA_PseU:0 1238 chr20 61917753 61917753 1 + C T rs146580267 61917753 + 61917733 61917773 41 AGTAAGGGATGGCGGGACGTCACCACCTTTTTTTCGGGGAA AGTAAGGGATGGCGGGACGTTACCACCTTTTTTTCGGGGAA Direct Gain 0 0.978963630183365 0 0.999960482120514 prediction 0.957927260366729 Functional Gain - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61917753 chr20:61917753 nonsynonymous SNV 0.979 1 21 hPsi_associated_SNPs_102278 0 0 1 0 3 Nucleus 0 0.438718592803616 0.999920964241028 0 hPsi_site_1238 iPseU_CNN:0.999920964241028;iRNA_PseU:0 1239 chrX 70323237 70323237 1 + C T rs4503258 70323237 + 70323217 70323257 41 CCTTCCCCCAGTGCCCTTTGCATCGTCCCCTCCCCCACCCC CCTTCCCCCAGTGCCCTTTGTATCGTCCCCTCCCCCACCCC Direct Gain 0 0.978933884111127 0 0.304013788700104 prediction 0.957867768222255 Functional Gain - FOXO4 ENSG00000184481 UTR3 Human protein_coding chrX:70323237 chrX:70323237 . . 0 21 hPsi_associated_SNPs_102279 0 0 1 0 0 Cytosol 0 0.438719677398768 0 0 hPsi_site_1239 iPseU_CNN:0;iRNA_PseU:0 1240 chr7 95115440 95115440 1 + G A LUAD 95115440 - 95115420 95115460 41 AGATGCCAAAACCATATTCTCATCTTCGACTTCAAAAACAG AGATGCCAAAACCATATTCTTATCTTCGACTTCAAAAACAG Direct Gain 0 0.978920628989774 0 0.997627735137939 prediction 0.957841257979547 Functional Gain - ASB4 ENSG00000005981 CDS Human protein_coding chr7:95115440 chr7:95115440 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102280 0 0 0 0 0 cytosol 0 0.438720315260802 0.995255470275878 0 hPsi_site_1240 iPseU_CNN:0.995255470275878;iRNA_PseU:0 1241 chr19 39034444 39034444 1 + C T rs148772854 39034444 + 39034424 39034464 41 GGAACCAGCAGAGCCTGGCGCACAGTCGCCTATGGGACGCA GGAACCAGCAGAGCCTGGCGTACAGTCGCCTATGGGACGCA Direct Gain 0 0.97889674521269 0 0.993348300457001 prediction 0.957793490425379 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:39034444 chr19:39034444 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_102281 6 0 0 0 1 chromatin 0 0.438695457645419 0.986696600914002 0 hPsi_site_1241 iPseU_CNN:0.986696600914002;iRNA_PseU:0 1242 chr11 14280917 14280917 1 + G A HNSC 14280917 - 14280897 14280937 41 CCGTCCTCCGGGAACTGCTTCACATACCTCTCCCGGGACCT CCGTCCTCCGGGAACTGCTTTACATACCTCTCCCGGGACCT Direct Gain 0 0.978890841858854 0 0.998113512992859 prediction 0.957781683717708 Functional Gain - SPON1 ENSG00000152268 ncRNA_exonic Human other chr11:14280917 chr11:14280917 . . 0 21 hPsi_associated_SNPs_102282 0 0 0 0 0 chromatin 0 0.438718592356243 0.996227025985718 0 hPsi_site_1242 iPseU_CNN:0.996227025985718;iRNA_PseU:0 1243 chr11 60567343 60567343 1 + C A UCEC 60567343 - 60567323 60567363 41 CAGATCGCAGCTCCGTCAGTGACTATCCATGTGTCCGGGGC CAGATCGCAGCTCCGTCAGTTACTATCCATGTGTCCGGGGC Direct Gain 0 0.978830206128333 0 0.999922871589661 prediction 0.957660412256666 Functional Gain - MS4A10 ENSG00000172689 CDS Human protein_coding chr11:60567343 chr11:60567343 synonymous SNV . 0 21 hPsi_associated_SNPs_102283 0 0 0 0 0 Nucleus 0 0.438747513353368 0.999845743179322 0 hPsi_site_1243 iPseU_CNN:0.999845743179322;iRNA_PseU:0 1244 chr10 94834926 94834926 1 + C A COAD 94834926 - 94834906 94834946 41 TGCTCGATGCGCGCGTGAATGAGGTTCCGCGCCTTCATGCC TGCTCGATGCGCGCGTGAATTAGGTTCCGCGCCTTCATGCC Direct Gain 0 0.978734169698262 0 0.999917387962341 prediction 0.957468339396524 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94834926 chr10:94834926 synonymous SNV . 0 21 hPsi_associated_SNPs_102284 0 0 0 0 0 Endoplasmic reticulum 0 0.438740158099243 0.999834775924682 0 hPsi_site_1244 iPseU_CNN:0.999834775924682;iRNA_PseU:0 1245 chr17 78022555 78022555 1 + G A rs201042940 78022555 - 78022535 78022575 41 GGAAGGCTTCCTTACGTGGTCTGGGTCCAAAACCACCAGCT GGAAGGCTTCCTTACGTGGTTTGGGTCCAAAACCACCAGCT Direct Gain 0 0.978719769838937 0 0.349443405866623 prediction 0.957439539677875 Functional Gain - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022555 chr17:78022555 nonsynonymous SNV 0.991 0 21 hPsi_associated_SNPs_102285 0 0 0 0 0 exosome 0 0.438718989496487 0 0 hPsi_site_1245 iPseU_CNN:0;iRNA_PseU:0 1246 chr22 37423138 37423138 1 + C T rs553475623 37423138 + 37423118 37423158 41 CGAGTAGCTGGGATTACAGGCATGTGCCACCACGCCCGGCT CGAGTAGCTGGGATTACAGGTATGTGCCACCACGCCCGGCT Direct Gain 0 0.978635442781041 0 0.988861501216888 prediction 0.957270885562082 Functional Gain - MPST ENSG00000128309 intronic Human protein_coding chr22:37423138 chr22:37423138 . . 0 21 hPsi_associated_SNPs_102286 0 0 0 0 0 chromatin 0 0.438718593261846 0.977723002433776 0 hPsi_site_1246 iPseU_CNN:0.977723002433776;iRNA_PseU:0 1247 chr7 139083402 139083402 1 + G A COAD 139083402 - 139083382 139083422 41 TTGTTCTTTGGATGCAATTTCATAATCCGCTCTTAAAGCCA TTGTTCTTTGGATGCAATTTTATAATCCGCTCTTAAAGCCA Direct Gain 0 0.978597639397205 0 0.614315867424011 prediction 0.957195278794411 Functional Gain - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139083402 chr7:139083402 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102287 0 0 0 0 0 unknown 0 0.426025286127903 0.228631734848022 0 hPsi_site_1247 iPseU_CNN:0.228631734848022;iRNA_PseU:0 1248 chr8 77767276 77767276 1 + T A COAD 77767276 - 77767256 77767296 41 AGGGCTTGGTGGCAAGCTGTAACCTGCCTGCTTTCCTTCAT AGGGCTTGGTGGCAAGCTGTTACCTGCCTGCTTTCCTTCAT Direct Gain 0 0.978594341812523 0 0.999946594238281 prediction 0.957188683625045 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77767276 chr8:77767276 nonsynonymous SNV 0.321 3 21 hPsi_associated_SNPs_102288 0 0 0 0 0 Ribosome 0 0.438628499959294 0.999893188476562 0 hPsi_site_1248 iPseU_CNN:0.999893188476562;iRNA_PseU:0 1249 chr9 139926607 139926607 1 + C T rs189599418 139926607 + 139926587 139926627 41 GAACTCAGGGGACCTTCCTGCTCCTGCCCCGCCCCTGCCCC GAACTCAGGGGACCTTCCTGTTCCTGCCCCGCCCCTGCCCC Direct Gain 0 0.978564548692681 0 0.998367369174957 prediction 0.957129097385362 Functional Gain - C9orf139;FUT7 ENSG00000180539;ENSG00000180549 UTR5 Human other chr9:139926607 chr9:139926607 . . 0 21 hPsi_associated_SNPs_102289 0 0 0 0 0 unknown 0 0.43871829026301 0.996734738349914 0 hPsi_site_1249 iPseU_CNN:0.996734738349914;iRNA_PseU:0 1250 chr19 35660674 35660674 1 + C T rs146882632 35660674 + 35660654 35660694 41 CCAGGGCTGCCGGTCCGAGTCTCCTACCTCCCCCAACCCTG CCAGGGCTGCCGGTCCGAGTTTCCTACCTCCCCCAACCCTG Direct Gain 0 0.978509642763582 0 0.999825000762939 prediction 0.957019285527164 Functional Gain - FXYD5 ENSG00000089327 UTR3 Human protein_coding chr19:35660674 chr19:35660674 . . 0 21 hPsi_associated_SNPs_102290 0 0 1 0 0 Ribosome 0 0.4387185893785 0.999650001525878 0 hPsi_site_1250 iPseU_CNN:0.999650001525878;iRNA_PseU:0 1251 chr1 162740121 162740121 1 + G A rs34722354 162740121 - 162740101 162740141 41 GGCAGGGAAAGGCTGACTGTCATTTCATCATCCAGCATCCT GGCAGGGAAAGGCTGACTGTTATTTCATCATCCAGCATCCT Direct Gain 0 0.978491983537699 0 0.980434775352478 prediction 0.956983967075399 Functional Gain - DDR2 ENSG00000162733 CDS Human protein_coding chr1:162740121 chr1:162740121 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102291 0 0 0 0 0 nucleolus 0 0.43871852955483 0.960869550704956 0 hPsi_site_1251 iPseU_CNN:0.960869550704956;iRNA_PseU:0 1252 chr22 31519095 31519095 1 + C T COAD 31519095 + 31519075 31519115 41 GGGTGTTGCCCAAACTGGGGCACCCTCCAAGGTAAGACCCC GGGTGTTGCCCAAACTGGGGTACCCTCCAAGGTAAGACCCC Direct Gain 0 0.978485898617188 0 0.353689968585968 prediction 0.956971797234376 Functional Gain - INPP5J ENSG00000185133 CDS Human protein_coding chr22:31519095 chr22:31519095 nonsynonymous SNV 0.858 1 21 hPsi_associated_SNPs_102292 0 0 0 0 1 Cytosol 0 0.438718592995104 0 0 hPsi_site_1252 iPseU_CNN:0;iRNA_PseU:0 1253 chr17 57288805 57288805 1 + G A LUSC 57288805 - 57288785 57288825 41 AGTGGGTGACCCCAAGTCCTCTTCTTTCCCATCAATAGCCA AGTGGGTGACCCCAAGTCCTTTTCTTTCCCATCAATAGCCA Direct Gain 0 0.978436261323476 0 0.122201263904572 prediction 0.956872522646952 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57288805 chr17:57288805 nonsynonymous SNV 0.680 1 21 hPsi_associated_SNPs_102293 0 0 0 0 0 chromatin 0 0.438728063506823 0 0 hPsi_site_1253 iPseU_CNN:0;iRNA_PseU:0 1254 chr16 88039846 88039846 1 + C T DLBC 88039846 + 88039826 88039866 41 CAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAACTC CAGAGCATCGGGAGCAACGTTACGCTCATCACCCTGAACTC Direct Gain 0 0.978431899033556 0 0.997550547122955 prediction 0.956863798067112 Functional Gain - BANP ENSG00000172530 CDS Human protein_coding chr16:88039846 chr16:88039846 synonymous SNV . 0 21 hPsi_associated_SNPs_102294 0 0 1 0 1 Cytosol 0 0.438708366425458 0.99510109424591 0 hPsi_site_1254 iPseU_CNN:0.99510109424591;iRNA_PseU:0 1255 chr11 57958274 57958274 1 + C T LUAD 57958274 + 57958254 57958294 41 GCAGCTCAGTTCTTCCTCTTCACCTTCTTTGCCTCCATCGA GCAGCTCAGTTCTTCCTCTTTACCTTCTTTGCCTCCATCGA Direct Gain 0 0.978428248386648 0 0.997003436088562 prediction 0.956856496773296 Functional Gain - OR9Q2 ENSG00000186513 CDS Human protein_coding chr11:57958274 chr11:57958274 synonymous SNV . 0 21 hPsi_associated_SNPs_102295 0 0 0 0 0 unknown 0 0.438717008973094 0.994006872177124 0 hPsi_site_1255 iPseU_CNN:0.994006872177124;iRNA_PseU:0 1256 chr9 110093446 110093446 1 + G A rs11573728 110093446 - 110093426 110093466 41 TGATGTAAATGCTTAAAAGTCATCATCACCATACTGTGCTA TGATGTAAATGCTTAAAAGTTATCATCACCATACTGTGCTA Direct Gain 0 0.978392367133492 0 0.83554208278656 prediction 0.956784734266983 Functional Gain - RAD23B ENSG00000119318 UTR3 Human protein_coding chr9:110093446 chr9:110093446 . . 0 21 hPsi_associated_SNPs_102296 0 0 0 0 0 Ribosome 0 0.438585086482919 0.67108416557312 0 hPsi_site_1256 iPseU_CNN:0.67108416557312;iRNA_PseU:0 1257 chr16 67029622 67029622 1 + C T SKCM 67029622 + 67029602 67029642 41 GGGAAGACACCCATCCAAGTCTTTTTAGGAGTCCCCTTCTC GGGAAGACACCCATCCAAGTTTTTTTAGGAGTCCCCTTCTC Direct Gain 0 0.978389584529001 0 0.945977747440338 prediction 0.956779169058003 Functional Gain - CES4A ENSG00000172824 CDS Human protein_coding chr16:67029622 chr16:67029622 synonymous SNV . 0 21 hPsi_associated_SNPs_102297 0 0 0 0 0 exosome 0 0.4387185313179 0.891955494880676 0 hPsi_site_1257 iPseU_CNN:0.891955494880676;iRNA_PseU:0 1258 chr5 148712361 148712361 1 + G A LUSC 148712361 - 148712341 148712381 41 GACTGCTGCAAGCGCTCCTTCACAGCCACCAGCTTCAGCTC GACTGCTGCAAGCGCTCCTTTACAGCCACCAGCTTCAGCTC Direct Gain 0 0.978374842486232 0 0.998042941093445 prediction 0.956749684972465 Functional Gain - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148712361 chr5:148712361 synonymous SNV . 0 21 hPsi_associated_SNPs_102298 0 0 0 0 0 exosome 0 0.438733571197585 0.99608588218689 0 hPsi_site_1258 iPseU_CNN:0.99608588218689;iRNA_PseU:0 1259 chr11 64032897 64032897 1 + C T BLCA 64032897 + 64032877 64032917 41 AAGCATCAGCGGAAGGCAGTCACCCTCACCCGCCGCCTGCT AAGCATCAGCGGAAGGCAGTTACCCTCACCCGCCGCCTGCT Direct Gain 0 0.978361311833088 0 0.999999642372131 prediction 0.956722623666175 Functional Gain - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64032897 chr11:64032897 synonymous SNV . 0 21 hPsi_associated_SNPs_102299 0 0 0 0 1 Ribosome 0 0.43871817363767 0.999999284744262 0 hPsi_site_1259 iPseU_CNN:0.999999284744262;iRNA_PseU:0 1260 chr19 44223113 44223113 1 + G A rs11555891 44223113 - 44223093 44223133 41 GGAGACCAGCAGGAAGAAGTCATAGCGGCTGAAGTCTACCT GGAGACCAGCAGGAAGAAGTTATAGCGGCTGAAGTCTACCT Direct Gain 0 0.97824224046702 0 0.999941349029541 prediction 0.956484480934041 Functional Gain - IRGC ENSG00000124449 CDS Human protein_coding chr19:44223113 chr19:44223113 nonsynonymous SNV 0.989 4 21 hPsi_associated_SNPs_102300 0 0 0 0 0 unknown 0 0.438719204462271 0.999882698059082 0 hPsi_site_1260 iPseU_CNN:0.999882698059082;iRNA_PseU:0 1261 chr12 121013647 121013647 1 + T A OV 121013647 - 121013627 121013667 41 ACAGGAACACGGTCTGAATTATCACTCTCCCCGTCGCTGTC ACAGGAACACGGTCTGAATTTTCACTCTCCCCGTCGCTGTC Direct Gain 0 0.97821711555816 0 0.997357845306396 prediction 0.95643423111632 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121013647 chr12:121013647 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102301 0 0 0 0 0 Ribosome 0 0.438192443325937 0.994715690612792 0 hPsi_site_1261 iPseU_CNN:0.994715690612792;iRNA_PseU:0 1262 chr18 5241170 5241170 1 + C T rs8091750 5241170 + 5241150 5241190 41 TGTTGAGAAGGGGAAGCAGTCATGTGAACTCATGTGCTGGA TGTTGAGAAGGGGAAGCAGTTATGTGAACTCATGTGCTGGA Direct Gain 0 0.97819551308415 0 0.999990940093994 prediction 0.956391026168301 Functional Gain - LINC00667 ENSG00000263753 ncRNA_exonic Human lincRNA chr18:5241170 chr18:5241170 . . 0 21 hPsi_associated_SNPs_102302 0 0 0 0 1 unknown 0 0.436961566079747 0.999981880187988 0 hPsi_site_1262 iPseU_CNN:0.999981880187988;iRNA_PseU:0 1263 chr6 163985721 163985721 1 + G A COAD 163985721 - 163985701 163985741 41 CAATGGGCTGAAATATCAGGCATGACTGGCATTTCAATCCA CAATGGGCTGAAATATCAGGTATGACTGGCATTTCAATCCA Direct Gain 0 0.97819273149645 0 0.999673306941986 prediction 0.956385462992901 Functional Gain - QKI ENSG00000112531 CDS Human protein_coding chr6:163985721 chr6:163985721 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102303 0 0 0 0 0 Ribosome 0 0.438804415156655 0.999346613883972 0 hPsi_site_1263 iPseU_CNN:0.999346613883972;iRNA_PseU:0 1264 chr11 76826575 76826575 1 + C T COAD 76826575 + 76826555 76826595 41 TTCAAGTCAGAGAAGTTGGACATGATCCGCCTGCGCAACCC TTCAAGTCAGAGAAGTTGGATATGATCCGCCTGCGCAACCC Direct Gain 0 0.978158917444716 0 0.999495387077332 prediction 0.956317834889431 Functional Gain - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76826575 chr11:76826575 synonymous SNV . 0 21 hPsi_associated_SNPs_102304 0 0 0 0 1 Endoplasmic reticulum 0 0.438717489062547 0.998990774154664 0 hPsi_site_1264 iPseU_CNN:0.998990774154664;iRNA_PseU:0 1265 chrX 128724242 128724242 1 + G A UCEC 128724242 - 128724222 128724262 41 AGAACAGTAAAAGCCTTAGTCTTCTTCGCTCCCAAGCAGAA AGAACAGTAAAAGCCTTAGTTTTCTTCGCTCCCAAGCAGAA Direct Gain 0 0.978136943310761 0 0.549713492393494 prediction 0.956273886621523 Functional Gain - OCRL ENSG00000122126 CDS Human protein_coding chrX:128724242 chrX:128724242 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_102305 0 0 0 0 0 Cytosol 0 0.43871862666565 0.099426984786988 0 hPsi_site_1265 iPseU_CNN:0.099426984786988;iRNA_PseU:0 1266 chr6 7584896 7584896 1 + C T BLCA 7584896 + 7584876 7584916 41 CTCAGGAAGCGTAGAGTGGTCATAGTTGACCCAGAAACCAA CTCAGGAAGCGTAGAGTGGTTATAGTTGACCCAGAAACCAA Direct Gain 0 0.97812144554493 0 0.999736130237579 prediction 0.95624289108986 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7584896 chr6:7584896 synonymous SNV . 0 21 hPsi_associated_SNPs_102306 0 0 1 0 0 Nucleus 0 0.438651427103068 0.999472260475158 0 hPsi_site_1266 iPseU_CNN:0.999472260475158;iRNA_PseU:0 1267 chr12 4873152 4873152 1 + A T THCA 4873152 + 4873132 4873172 41 GGATGAAAATGTCTGCTTGGATCAGGGACCCGTTCCAGGCA GGATGAAAATGTCTGCTTGGTTCAGGGACCCGTTCCAGGCA Direct Gain 0 0.978107916630794 0 0.975594639778137 prediction 0.956215833261587 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4873152 chr12:4873152 nonsynonymous SNV 0.157 4 21 hPsi_associated_SNPs_102307 0 0 0 0 2 cytosol 0 0.438717230942361 0.951189279556274 0 hPsi_site_1267 iPseU_CNN:0.951189279556274;iRNA_PseU:0 1268 chr12 41966630 41966630 1 + C A ESCA 41966630 - 41966610 41966650 41 TGGAGCCTGTGAGCCTGCATGATATTCTGACACTCAAGCTC TGGAGCCTGTGAGCCTGCATTATATTCTGACACTCAAGCTC Direct Gain 0 0.978079883606677 0 0.975639462471008 prediction 0.956159767213354 Functional Gain - PDZRN4 ENSG00000165966 CDS Human protein_coding chr12:41966630 chr12:41966630 synonymous SNV . 0 21 hPsi_associated_SNPs_102308 0 0 0 0 0 exosome 0 0.454544898967139 0.951278924942016 0 hPsi_site_1268 iPseU_CNN:0.951278924942016;iRNA_PseU:0 1269 chr20 31825571 31825571 1 + G A rs144532776 31825571 - 31825551 31825591 41 GGCAGGCCTCCAAACTGGGCCATGGTCTGGGCTAACAGCCC GGCAGGCCTCCAAACTGGGCTATGGTCTGGGCTAACAGCCC Direct Gain 0 0.978073987242508 0 0.999992549419403 prediction 0.956147974485017 Functional Gain - BPIFA1 ENSG00000198183 CDS Human protein_coding chr20:31825571 chr20:31825571 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_102309 0 0 0 0 0 unknown 0 0.438718599724503 0.999985098838806 0 hPsi_site_1269 iPseU_CNN:0.999985098838806;iRNA_PseU:0 1270 chr14 79181380 79181380 1 + G A SKCM 79181380 - 79181360 79181400 41 ATTCTTGCAGGGGTAGCTGTCACACTGCTTGGCACTCATCC ATTCTTGCAGGGGTAGCTGTTACACTGCTTGGCACTCATCC Direct Gain 0 0.978072649420992 0 0.998259246349335 prediction 0.956145298841984 Functional Gain - NRXN3 ENSG00000021645 CDS Human protein_coding chr14:79181380 chr14:79181380 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_102310 0 0 0 0 0 chromatin 0 0.438520128372523 0.99651849269867 0 hPsi_site_1270 iPseU_CNN:0.99651849269867;iRNA_PseU:0 1271 chr3 39425264 39425264 1 + G A BRCA 39425264 - 39425244 39425284 41 CATAAGCGTTTCCACCGTGTCTCCGACATCTTGGGGTTGCA CATAAGCGTTTCCACCGTGTTTCCGACATCTTGGGGTTGCA Direct Gain 0 0.978014699395914 0 0.964960634708405 prediction 0.956029398791828 Functional Gain - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39425264 chr3:39425264 nonsynonymous SNV 0.852 0 21 hPsi_associated_SNPs_102311 0 0 0 0 0 Ribosome 0 0.438492405951264 0.92992126941681 0 hPsi_site_1271 iPseU_CNN:0.92992126941681;iRNA_PseU:0 1272 chr3 130285781 130285781 1 + C A LUAD 130285781 - 130285761 130285801 41 GTATTCCCACCCATCTGCCTGATATTCTCAATGGCCTTTCC GTATTCCCACCCATCTGCCTTATATTCTCAATGGCCTTTCC Direct Gain 0 0.978014175427782 0 0.995046496391296 prediction 0.956028350855564 Functional Gain - COL6A6 ENSG00000206384 CDS Human protein_coding chr3:130285781 chr3:130285781 synonymous SNV . 0 21 hPsi_associated_SNPs_102312 0 0 0 0 0 exosome 0 0.438718803948286 0.990092992782592 0 hPsi_site_1272 iPseU_CNN:0.990092992782592;iRNA_PseU:0 1273 chr17 12656627 12656627 1 + C T SKCM 12656627 + 12656607 12656647 41 CAGGGAGAAGGGCACAGGGTCTCCTCGCCCATCAGCAGCCA CAGGGAGAAGGGCACAGGGTTTCCTCGCCCATCAGCAGCCA Direct Gain 0 0.977999562702743 0 0.968799352645874 prediction 0.955999125405486 Functional Gain - MYOCD ENSG00000141052;ENSG00000273452 CDS Human other chr17:12656627 chr17:12656627 synonymous SNV . 0 21 hPsi_associated_SNPs_102313 0 0 0 0 1 exosome 0 0.43872144627712 0.937598705291748 0 hPsi_site_1273 iPseU_CNN:0.937598705291748;iRNA_PseU:0 1274 chr2 241534647 241534647 1 + G A BLCA 241534647 - 241534627 241534667 41 GCTCCACGAAGTATGACTGTCACCCACCAGTGCCCGGGCCC GCTCCACGAAGTATGACTGTTACCCACCAGTGCCCGGGCCC Direct Gain 0 0.977994106776153 0 0.824607372283936 prediction 0.955988213552307 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241534647 chr2:241534647 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_102314 0 0 0 0 0 cytosol 0 0.437609571702335 0.649214744567872 0 hPsi_site_1274 iPseU_CNN:0.649214744567872;iRNA_PseU:0 1275 chr19 56538652 56538652 1 + G A LUSC 56538652 - 56538632 56538672 41 AACAGCCTTTCTGGTCGGGACATGATCTCCGTCACCGGAGC AACAGCCTTTCTGGTCGGGATATGATCTCCGTCACCGGAGC Direct Gain 0 0.977978629021881 0 0.999993681907654 prediction 0.955957258043763 Functional Gain - NLRP5 ENSG00000171487 CDS Human protein_coding chr19:56538652 chr19:56538652 nonsynonymous SNV 0.155 0 21 hPsi_associated_SNPs_102315 0 0 0 0 0 unknown 0 0.438732152846063 0.999987363815308 0 hPsi_site_1275 iPseU_CNN:0.999987363815308;iRNA_PseU:0 1276 chr15 80767431 80767431 1 + G T LGG 80767431 + 80767411 80767451 41 ACAGGGCGAGTGATTTATGTGTCTGACTCCGTCACCCCTGT ACAGGGCGAGTGATTTATGTTTCTGACTCCGTCACCCCTGT Direct Gain 0 0.977956700930199 0 0.999944090843201 prediction 0.955913401860398 Functional Gain - ARNT2 ENSG00000172379 CDS Human protein_coding chr15:80767431 chr15:80767431 synonymous SNV . 0 21 hPsi_associated_SNPs_102316 0 0 1 0 1 Cytosol 0 0.439209861490696 0.999888181686402 0 hPsi_site_1276 iPseU_CNN:0.999888181686402;iRNA_PseU:0 1277 chr16 50334726 50334726 1 + G A ESCA 50334726 - 50334706 50334746 41 CACGTCGTGGGACCACACGTCATACTGCCACTTGCGCAGCC CACGTCGTGGGACCACACGTTATACTGCCACTTGCGCAGCC Direct Gain 0 0.97792580529266 0 0.87532114982605 prediction 0.955851610585319 Functional Gain - ADCY7 ENSG00000121281 CDS Human protein_coding chr16:50334726 chr16:50334726 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_102317 0 0 0 0 0 Endoplasmic reticulum 0 0.426662550716401 0.7506422996521 0 hPsi_site_1277 iPseU_CNN:0.7506422996521;iRNA_PseU:0 1278 chr5 139193044 139193044 1 + C T LUSC 139193044 + 139193024 139193064 41 GATGAGAGCGACAGCTGCGTCAGCTTCGAGGCCCCCCTCAC GATGAGAGCGACAGCTGCGTTAGCTTCGAGGCCCCCCTCAC Direct Gain 0 0.977914095014199 0 1 prediction 0.955828190028399 Functional Gain - PSD2 ENSG00000146005 CDS Human protein_coding chr5:139193044 chr5:139193044 synonymous SNV . 0 21 hPsi_associated_SNPs_102318 0 0 0 0 0 exosome 0 0.438718592218474 1 0 hPsi_site_1278 iPseU_CNN:1;iRNA_PseU:0 1279 chr18 77810311 77810311 1 + C T rs150648152 77810311 + 77810291 77810331 41 GGGAACTGGGGAGGACAGGTCATGATCAGTGTTTCCTGATT GGGAACTGGGGAGGACAGGTTATGATCAGTGTTTCCTGATT Direct Gain 0 0.977903115510292 0 0.346162497997284 prediction 0.955806231020583 Functional Gain - RBFA ENSG00000261126 ncRNA_intronic Human lincRNA chr18:77810311 chr18:77810311 . . 0 21 hPsi_associated_SNPs_102319 0 0 1 0 0 Ribosome 0 0.438718587740998 0 0 hPsi_site_1279 iPseU_CNN:0;iRNA_PseU:0 1280 chr19 50979796 50979796 1 + G A rs150737582 50979796 - 50979776 50979816 41 GCTGGCTGCCGCCATCTCGGCTTCTTCCCACCAGCGAAGGG GCTGGCTGCCGCCATCTCGGTTTCTTCCCACCAGCGAAGGG Direct Gain 0 0.977848983339726 0 0.998201370239258 prediction 0.955697966679452 Functional Gain - EMC10;FAM71E1 ENSG00000142530;ENSG00000161671 UTR5 Human other chr19:50979796 chr19:50979796 . . 0 21 hPsi_associated_SNPs_102320 0 0 0 0 0 unknown 0 0.438712039878 0.996402740478516 0 hPsi_site_1280 iPseU_CNN:0.996402740478516;iRNA_PseU:0 1281 chr19 10132806 10132806 1 + C T rs115119843 10132806 + 10132786 10132826 41 CTGAGAACACAGGAATGATTCATAGCCCACCCCCCACCTCC CTGAGAACACAGGAATGATTTATAGCCCACCCCCCACCTCC Direct Gain 0 0.977840843542688 0 0.999910593032837 prediction 0.955681687085377 Functional Gain - RDH8 ENSG00000080511 UTR3 Human protein_coding chr19:10132806 chr19:10132806 . . 0 21 hPsi_associated_SNPs_102321 0 0 0 0 0 unknown 0 0.438714128428377 0.999821186065674 0 hPsi_site_1281 iPseU_CNN:0.999821186065674;iRNA_PseU:0 1282 chr10 105194607 105194607 1 + G A rs187041040 105194607 - 105194587 105194627 41 GTCAGCCCCTCGTTGGGAGTCACCTTCACCACTCGGCCCAT GTCAGCCCCTCGTTGGGAGTTACCTTCACCACTCGGCCCAT Direct Gain 0 0.977836128706691 0 0.999996721744537 prediction 0.955672257413382 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105194607 chr10:105194607 synonymous SNV . 0 21 hPsi_associated_SNPs_102322 0 0 0 0 0 Nucleus 0 0.438621522377625 0.999993443489074 0 hPsi_site_1282 iPseU_CNN:0.999993443489074;iRNA_PseU:0 1283 chr13 36046548 36046548 1 + C T LIHC 36046548 + 36046528 36046568 41 GCCTTGCAGGCCCAGTGGTTCTCAGCACCCCTGCCCAGCTC GCCTTGCAGGCCCAGTGGTTTTCAGCACCCCTGCCCAGCTC Direct Gain 0 0.977834751167554 0 0.969574868679047 prediction 0.955669502335107 Functional Gain - NBEA ENSG00000172915 CDS Human protein_coding chr13:36046548 chr13:36046548 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102323 0 0 0 0 1 Nucleus 0 0.438718592994806 0.939149737358094 0 hPsi_site_1283 iPseU_CNN:0.939149737358094;iRNA_PseU:0 1284 chr13 26128028 26128028 1 + G A SKCM 26128028 - 26128008 26128048 41 AAAAGGGCTTGAGTATACTTCACAACCTCAAGAGTCACCAA AAAAGGGCTTGAGTATACTTTACAACCTCAAGAGTCACCAA Direct Gain 0 0.977830244516641 0 0.999996602535248 prediction 0.955660489033282 Functional Gain - ATP8A2 ENSG00000132932 CDS Human protein_coding chr13:26128028 chr13:26128028 synonymous SNV . 0 21 hPsi_associated_SNPs_102324 0 0 0 0 0 unknown 0 0.438719130654166 0.999993205070496 0 hPsi_site_1284 iPseU_CNN:0.999993205070496;iRNA_PseU:0 1285 chr1 233490664 233490664 1 + G A SKCM 233490664 - 233490644 233490684 41 GATTCTTGAGGCATCTCAGTCATCACTGCCCCTTCAATAGC GATTCTTGAGGCATCTCAGTTATCACTGCCCCTTCAATAGC Direct Gain 0 0.977818383528177 0 0.92888742685318 prediction 0.955636767056354 Functional Gain - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233490664 chr1:233490664 nonsynonymous SNV 0.082 1 21 hPsi_associated_SNPs_102325 0 0 0 0 0 unknown 0 0.438719292188594 0.85777485370636 0 hPsi_site_1285 iPseU_CNN:0.85777485370636;iRNA_PseU:0 1286 chr10 72639160 72639160 1 + G T rs186747600 72639160 + 72639140 72639180 41 GTGTGTGTGTGTGTGTGTGTGTTTTTCCTGTTTGCCCAGCA GTGTGTGTGTGTGTGTGTGTTTTTTTCCTGTTTGCCCAGCA Direct Gain 0 0.977817958613545 0 0.671539425849915 prediction 0.955635917227091 Functional Gain - SGPL1 ENSG00000166224 UTR3 Human protein_coding chr10:72639160 chr10:72639160 . . 0 21 hPsi_associated_SNPs_102326 0 0 1 0 0 Ribosome 0 0.438942472377343 0.34307885169983 0 hPsi_site_1286 iPseU_CNN:0.34307885169983;iRNA_PseU:0 1287 chr4 129770159 129770159 1 + C T HNSC 129770159 + 129770139 129770179 41 GTGTCTGAAGAGAAATCCCTCATGTTCATCAGGCCCAAGAA GTGTCTGAAGAGAAATCCCTTATGTTCATCAGGCCCAAGAA Direct Gain 0 0.977812945505774 0 0.97816526889801 prediction 0.955625891011547 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129770159 chr4:129770159 synonymous SNV . 0 21 hPsi_associated_SNPs_102327 0 0 1 0 0 Ribosome 0 0.438695661534933 0.95633053779602 0 hPsi_site_1287 iPseU_CNN:0.95633053779602;iRNA_PseU:0 1288 chrX 109696260 109696260 1 + G T THYM 109696260 + 109696240 109696280 41 AGAGCTCCAGCTTCTGGAGAGATAGCCACGCCTCTGAGATC AGAGCTCCAGCTTCTGGAGATATAGCCACGCCTCTGAGATC Direct Gain 0 0.977761297453204 0 0.384233295917511 prediction 0.955522594906408 Functional Gain - RTL9 ENSG00000243978 CDS Human protein_coding chrX:109696260 chrX:109696260 nonsynonymous SNV 0.121 0 21 hPsi_associated_SNPs_102328 0 0 0 0 0 unknown 0 0.439022041556167 0 0 hPsi_site_1288 iPseU_CNN:0;iRNA_PseU:0 1289 chr2 176959215 176959215 1 + G A STAD 176959215 - 176959195 176959235 41 ATGTCCGGCTGATTTAGAGCCACATCCCCTGATACAAACAA ATGTCCGGCTGATTTAGAGCTACATCCCCTGATACAAACAA Direct Gain 0 0.977690214403965 0 0.999985456466675 prediction 0.955380428807929 Functional Gain - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176959215 chr2:176959215 synonymous SNV . 0 21 hPsi_associated_SNPs_102329 0 0 0 0 0 exosome 0 0.43871859299523 0.99997091293335 0 hPsi_site_1289 iPseU_CNN:0.99997091293335;iRNA_PseU:0 1290 chr12 64456855 64456855 1 + G T SARC 64456855 + 64456835 64456875 41 GATAAGCAGAGATTCATGGAGATGTACCCTGCTGCGTTCTG GATAAGCAGAGATTCATGGATATGTACCCTGCTGCGTTCTG Direct Gain 0 0.977658846720743 0 0.999999284744263 prediction 0.955317693441486 Functional Gain - SRGAP1 ENSG00000196935 CDS Human protein_coding chr12:64456855 chr12:64456855 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102330 0 0 0 0 1 Nucleus 0 0.439675491823187 0.999998569488526 0 hPsi_site_1290 iPseU_CNN:0.999998569488526;iRNA_PseU:0 1291 chr20 43117999 43117999 1 + C A rs138479504 43117999 - 43117979 43118019 41 ACCGCGTTCCAGGTGGCAGTGTCCAGCTCCCCAGCCGTGCC ACCGCGTTCCAGGTGGCAGTTTCCAGCTCCCCAGCCGTGCC Direct Gain 0 0.977657848950779 0 0.99803626537323 prediction 0.955315697901558 Functional Gain - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43117999 chr20:43117999 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_102331 0 0 0 0 0 Ribosome 0 0.438719073392514 0.99607253074646 0 hPsi_site_1291 iPseU_CNN:0.99607253074646;iRNA_PseU:0 1292 chr21 46021430 46021430 1 + C T LAML 46021430 + 46021410 46021450 41 AGCTGCCAGCCGGCTTGCTGCACCACCTCCTGCTGCAGACC AGCTGCCAGCCGGCTTGCTGTACCACCTCCTGCTGCAGACC Direct Gain 0 0.977639112632407 0 0.999677419662476 prediction 0.955278225264814 Functional Gain - KRTAP10-7 ENSG00000205441 CDS Human other chr21:46021430 chr21:46021430 synonymous SNV . 0 21 hPsi_associated_SNPs_102332 0 0 0 0 0 unknown 0 0.43871827180351 0.999354839324952 0 hPsi_site_1292 iPseU_CNN:0.999354839324952;iRNA_PseU:0 1293 chr19 1913260 1913260 1 + C T rs149483810 1913260 + 1913240 1913280 41 CTGACCGTGGATTTCAGGGACACATACCGCCTCCAGCGGGG CTGACCGTGGATTTCAGGGATACATACCGCCTCCAGCGGGG Direct Gain 0 0.97757499155942 0 0.993948340415955 prediction 0.95514998311884 Functional Gain - ADAT3 ENSG00000227500;ENSG00000213638 UTR5;UTR3 Human other chr19:1913260 chr19:1913260 . . 0 21 hPsi_associated_SNPs_102333 0 0 1 0 0 exosome 0 0.438712717268235 0.98789668083191 0 hPsi_site_1293 iPseU_CNN:0.98789668083191;iRNA_PseU:0 1294 chr14 102493986 102493986 1 + G A LUSC 102493986 - 102493966 102494006 41 GCACTGCGTCATCAAGGTGGCATACTCGTCTCCTTCAAAGA GCACTGCGTCATCAAGGTGGTATACTCGTCTCCTTCAAAGA Direct Gain 0 0.9775688867272 0 0.999582529067993 prediction 0.955137773454401 Functional Gain - DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102493986 chr14:102493986 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_102334 0 0 0 0 0 Cytosol 0 0.44018847655662 0.999165058135986 0 hPsi_site_1294 iPseU_CNN:0.999165058135986;iRNA_PseU:0 1295 chr14 72200444 72200444 1 + G A OV 72200444 - 72200424 72200464 41 GGCATCAGGCCAGGGTCGGGCATAGGCTGCCTGCGGGTCTC GGCATCAGGCCAGGGTCGGGTATAGGCTGCCTGCGGGTCTC Direct Gain 0 0.977556070781824 0 0.861324310302734 prediction 0.955112141563648 Functional Gain - SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72200444 chr14:72200444 nonsynonymous SNV 0.390 1 21 hPsi_associated_SNPs_102335 0 0 0 0 0 Nucleus 0 0.438719137917453 0.722648620605468 0 hPsi_site_1295 iPseU_CNN:0.722648620605468;iRNA_PseU:0 1296 chr17 3213841 3213841 1 + C T rs61734052 3213841 + 3213821 3213861 41 GATGTGGGGTGTGTCAGTGTCACTGTCCCTGCCATGCTGAG GATGTGGGGTGTGTCAGTGTTACTGTCCCTGCCATGCTGAG Direct Gain 0 0.977530495043884 0 0.260396957397461 prediction 0.955060990087768 Functional Gain - OR3A4P ENSG00000180068 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:3213841 chr17:3213841 . . 0 21 hPsi_associated_SNPs_102336 0 0 0 0 0 unknown 0 0.43567381887348 0 0 hPsi_site_1296 iPseU_CNN:0;iRNA_PseU:0 1297 chr2 189856949 189856949 1 + C A LUAD 189856949 - 189856929 189856969 41 TAGAAAGTTACTTACTGGTTGACCATCACTGCCTCGAGCAC TAGAAAGTTACTTACTGGTTTACCATCACTGCCTCGAGCAC Direct Gain 0 0.977528042205117 0 0.996045529842377 prediction 0.955056084410233 Functional Gain - COL3A1 ENSG00000168542 CDS Human protein_coding chr2:189856949 chr2:189856949 nonsynonymous SNV 0.987 2 21 hPsi_associated_SNPs_102337 0 0 0 0 0 Endoplasmic reticulum 0 0.438718510191383 0.992091059684754 0 hPsi_site_1297 iPseU_CNN:0.992091059684754;iRNA_PseU:0 1298 chr1 248366730 248366730 1 + G A SKCM 248366730 - 248366710 248366750 41 GCAAATGGCAGTGTAGCGGTCATAAGCCATAACAGCCAAAA GCAAATGGCAGTGTAGCGGTTATAAGCCATAACAGCCAAAA Direct Gain 0 0.97751869648027 0 0.953615248203278 prediction 0.95503739296054 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248366730 chr1:248366730 nonsynonymous SNV 0.130 3 21 hPsi_associated_SNPs_102338 0 0 0 0 0 exosome 0 0.438756071700904 0.907230496406556 0 hPsi_site_1298 iPseU_CNN:0.907230496406556;iRNA_PseU:0 1299 chr1 20645915 20645915 1 + G A CESC 20645915 - 20645895 20645935 41 TGGTCAAACTCTCCCAGGGTCATGTCCCCTTTCTCTATCAG TGGTCAAACTCTCCCAGGGTTATGTCCCCTTTCTCTATCAG Direct Gain 0 0.977479554364169 0 0.997261762619019 prediction 0.954959108728338 Functional Gain - VWA5B1 ENSG00000158816 CDS Human protein_coding chr1:20645915 chr1:20645915 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_102339 0 0 0 0 0 exosome 0 0.438718388405382 0.994523525238038 0 hPsi_site_1299 iPseU_CNN:0.994523525238038;iRNA_PseU:0 1300 chr11 113215139 113215139 1 + C T BLCA 113215139 + 113215119 113215159 41 GAGAGCGGACGGAGCCTGATCATCAACCACCTTGACCTGAC GAGAGCGGACGGAGCCTGATTATCAACCACCTTGACCTGAC Direct Gain 0 0.977444357519225 0 0.96187150478363 prediction 0.954888715038449 Functional Gain - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113215139 chr11:113215139 synonymous SNV . 0 21 hPsi_associated_SNPs_102340 0 0 0 0 1 cytosol 0 0.438718307460945 0.92374300956726 0 hPsi_site_1300 iPseU_CNN:0.92374300956726;iRNA_PseU:0 1301 chr18 42533287 42533287 1 + G A BRCA 42533287 - 42533267 42533307 41 ACCTGGAGACATGGAGGAGTCATAAGAACTTCTCTCCTTGC ACCTGGAGACATGGAGGAGTTATAAGAACTTCTCTCCTTGC Direct Gain 0 0.977436884913174 0 0.99998950958252 prediction 0.954873769826348 Functional Gain - SETBP1 ENSG00000152217 CDS Human protein_coding chr18:42533287 chr18:42533287 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102341 0 0 0 0 0 nucleus 0 0.43871858441497 0.99997901916504 0 hPsi_site_1301 iPseU_CNN:0.99997901916504;iRNA_PseU:0 1302 chr7 88964566 88964566 1 + G A COAD 88964566 - 88964546 88964586 41 AGAAGCAGTTGTGCTTTAGACATTTCCGTTTGTGCCTTTCA AGAAGCAGTTGTGCTTTAGATATTTCCGTTTGTGCCTTTCA Direct Gain 0 0.977420462969353 0 0.999243140220642 prediction 0.954840925938707 Functional Gain - ZNF804B ENSG00000182348 CDS Human protein_coding chr7:88964566 chr7:88964566 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_102342 0 0 0 0 0 chromatin 0 0.438718200447483 0.998486280441284 0 hPsi_site_1302 iPseU_CNN:0.998486280441284;iRNA_PseU:0 1303 chr12 130846054 130846054 1 + G T LUSC 130846054 + 130846034 130846074 41 GTATTGAAGCTGAAGCTCGTGATGATCGTTGGCATCGATTG GTATTGAAGCTGAAGCTCGTTATGATCGTTGGCATCGATTG Direct Gain 0 0.977393593762802 0 0.996810913085938 prediction 0.954787187525605 Functional Gain - PIWIL1 ENSG00000125207 CDS Human protein_coding chr12:130846054 chr12:130846054 synonymous SNV . 0 21 hPsi_associated_SNPs_102343 0 0 0 0 2 Nucleus 0 0.424939296693587 0.993621826171876 0 hPsi_site_1303 iPseU_CNN:0.993621826171876;iRNA_PseU:0 1304 chr1 162482610 162482610 1 + G A BLCA 162482610 - 162482590 162482630 41 ATTTAGAAAACACTAACCTTCATATTCCTCTTCATTCTCAA ATTTAGAAAACACTAACCTTTATATTCCTCTTCATTCTCAA Direct Gain 0 0.977359298956853 0 0.594599664211273 prediction 0.954718597913707 Functional Gain - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162482610 chr1:162482610 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_102344 0 0 0 0 0 chromatin 0 0.438535788331117 0.189199328422546 0 hPsi_site_1304 iPseU_CNN:0.189199328422546;iRNA_PseU:0 1305 chr15 90610643 90610643 1 + G A ESCA 90610643 - 90610623 90610663 41 CTTCCGCCGGGTGTGCTTCTCACAGGCTGCCTCCACCTCCA CTTCCGCCGGGTGTGCTTCTTACAGGCTGCCTCCACCTCCA Direct Gain 0 0.977282335565549 0 0.99393904209137 prediction 0.954564671131098 Functional Gain - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90610643 chr15:90610643 nonsynonymous SNV 0.850 1 21 hPsi_associated_SNPs_102345 0 0 0 0 0 Endoplasmic reticulum 0 0.438731329993361 0.98787808418274 0 hPsi_site_1305 iPseU_CNN:0.98787808418274;iRNA_PseU:0 1306 chr11 100141892 100141892 1 + G A SKCM 100141892 - 100141872 100141912 41 GGTGGCTACCACTCGAAATTCATATTCCACCCAGGGATTTA GGTGGCTACCACTCGAAATTTATATTCCACCCAGGGATTTA Direct Gain 0 0.977212906223604 0 0.993258118629456 prediction 0.954425812447207 Functional Gain - CNTN5 ENSG00000149972 CDS Human protein_coding chr11:100141892 chr11:100141892 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102346 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593001034 0.986516237258912 0 hPsi_site_1306 iPseU_CNN:0.986516237258912;iRNA_PseU:0 1307 chr12 50316033 50316033 1 + G A rs114305896 50316033 - 50316013 50316053 41 GGAACCTGAAGTTCTTCCACCTTGGCCCCAGTCCCCAGCCC GGAACCTGAAGTTCTTCCACTTTGGCCCCAGTCCCCAGCCC Direct Gain 0 0.977149427042777 0 0.824716329574585 prediction 0.954298854085554 Functional Gain - LINC02395 ENSG00000257771 ncRNA_exonic Human lincRNA chr12:50316033 chr12:50316033 . . 0 21 hPsi_associated_SNPs_102347 0 0 0 0 0 unknown 0 0.438718592981056 0.64943265914917 0 hPsi_site_1307 iPseU_CNN:0.64943265914917;iRNA_PseU:0 1308 chr17 45377887 45377887 1 + G A SKCM 45377887 - 45377867 45377907 41 ACGGTTGCAGGTATTTTCGTCATGTAGGGCTCCCCGGTCAA ACGGTTGCAGGTATTTTCGTTATGTAGGGCTCCCCGGTCAA Direct Gain 0 0.977133630347 0 0.994751334190369 prediction 0.954267260693999 Functional Gain - ITGB3 ENSG00000259207;ENSG00000259753 CDS Human other chr17:45377887 chr17:45377887 nonsynonymous SNV 0.070 2 21 hPsi_associated_SNPs_102348 0 0 0 0 0 cytosol 0 0.438718593049433 0.989502668380738 0 hPsi_site_1308 iPseU_CNN:0.989502668380738;iRNA_PseU:0 1309 chr12 2760755 2760755 1 + C T BLCA 2760755 + 2760735 2760775 41 CGGAGGGGCCCTCCTGTTCTCACCCCCCTCTTGCTGTGCTA CGGAGGGGCCCTCCTGTTCTTACCCCCCTCTTGCTGTGCTA Direct Gain 0 0.977097249636542 0 0.979177236557007 prediction 0.954194499273085 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2760755 chr12:2760755 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_102349 2 0 0 0 1 Cytosol 0 0.438718593167136 0.958354473114014 0 hPsi_site_1309 iPseU_CNN:0.958354473114014;iRNA_PseU:0 1310 chr12 112194045 112194045 1 + G T rs182603167 112194045 + 112194025 112194065 41 GGAAGTCCGGGAAGATGGTTGTTATGGGCCATCAAGAGCAG GGAAGTCCGGGAAGATGGTTTTTATGGGCCATCAAGAGCAG Direct Gain 0 0.977080000528734 0 0.889360189437866 prediction 0.954160001057468 Functional Gain - ACAD10 ENSG00000111271;ENSG00000257767 intronic Human other chr12:112194045 chr12:112194045 . . 0 21 hPsi_associated_SNPs_102350 0 0 0 0 1 Endoplasmic reticulum 0 0.438648498609441 0.778720378875732 0 hPsi_site_1310 iPseU_CNN:0.778720378875732;iRNA_PseU:0 1311 chr2 86368352 86368352 1 + G A rs115393590 86368352 - 86368332 86368372 41 ATGGGGGCAGGGAGGAGGGTCACCTGCCCACTGCAACTCTT ATGGGGGCAGGGAGGAGGGTTACCTGCCCACTGCAACTCTT Direct Gain 0 0.977044075819338 0 0.999458014965057 prediction 0.954088151638677 Functional Gain - PTCD3 ENSG00000132300 UTR3 Human protein_coding chr2:86368352 chr2:86368352 . . 0 21 hPsi_associated_SNPs_102351 0 0 0 0 0 Nucleus 0 0.438853311977652 0.998916029930114 0 hPsi_site_1311 iPseU_CNN:0.998916029930114;iRNA_PseU:0 1312 chr19 16860548 16860548 1 + G A rs16981402 16860548 - 16860528 16860568 41 AGCCGCAGGACGGTCACTGTCTTGTGCCCCAGCAGCCTTGG AGCCGCAGGACGGTCACTGTTTTGTGCCCCAGCAGCCTTGG Direct Gain 0 0.977024586053348 0 0.989003241062164 prediction 0.954049172106696 Functional Gain - NWD1 ENSG00000188039 CDS Human protein_coding chr19:16860548 chr19:16860548 synonymous SNV . 0 21 hPsi_associated_SNPs_102352 0 0 0 0 0 exosome 0 0.438718888077138 0.978006482124328 0 hPsi_site_1312 iPseU_CNN:0.978006482124328;iRNA_PseU:0 1313 chr2 206659964 206659964 1 + G T rs113261699 206659964 + 206659944 206659984 41 GGAGATGCAGCCGCACAGGGGATGATTACCCTCCTAGGACC GGAGATGCAGCCGCACAGGGTATGATTACCCTCCTAGGACC Direct Gain 0 0.97702182242502 0 0.99712747335434 prediction 0.954043644850039 Functional Gain - NRP2 ENSG00000118257 UTR3 Human protein_coding chr2:206659964 chr2:206659964 . . 0 21 hPsi_associated_SNPs_102353 0 0 1 0 0 Nucleus 0 0.43871859299497 0.99425494670868 0 hPsi_site_1313 iPseU_CNN:0.99425494670868;iRNA_PseU:0 1314 chr2 155711340 155711340 1 + G T LUSC 155711340 + 155711320 155711360 41 AAGAGGGATTCTTTAAAGTTGATTACTCCCAGTTCCATGCA AAGAGGGATTCTTTAAAGTTTATTACTCCCAGTTCCATGCA Direct Gain 0 0.977008759247781 0 0.998866677284241 prediction 0.954017518495561 Functional Gain - KCNJ3 ENSG00000162989 CDS Human protein_coding chr2:155711340 chr2:155711340 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102354 0 0 0 1 0 exosome 0 0.438736731497433 0.997733354568482 0 hPsi_site_1314 iPseU_CNN:0.997733354568482;iRNA_PseU:0 1315 chr16 27374569 27374569 1 + G A COAD 27374569 - 27374549 27374589 41 GGAATGAGGTCTTGGAAAGGCTTATACCCCTCTTCCCCACT GGAATGAGGTCTTGGAAAGGTTTATACCCCTCTTCCCCACT Direct Gain 0 0.976989535169323 0 0.986164689064026 prediction 0.953979070338645 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374569 chr16:27374569 synonymous SNV . 0 21 hPsi_associated_SNPs_102355 0 0 0 0 0 Endoplasmic reticulum 0 0.438718612054141 0.972329378128052 0 hPsi_site_1315 iPseU_CNN:0.972329378128052;iRNA_PseU:0 1316 chr11 108018624 108018624 1 + G A rs12271846 108018624 - 108018604 108018644 41 CTGAGGACATGGGCTTCTGTCTTGTTTCTAGTACTGCTGCA CTGAGGACATGGGCTTCTGTTTTGTTTCTAGTACTGCTGCA Direct Gain 0 0.976982457356452 0 0.454475104808807 prediction 0.953964914712904 Functional Gain - ACAT1 ENSG00000075239 downstream Human protein_coding chr11:108018624 chr11:108018624 . . 0 21 hPsi_associated_SNPs_102356 1 0 1 0 0 Ribosome 0 0.438718600895428 0 0 hPsi_site_1316 iPseU_CNN:0;iRNA_PseU:0 1317 chr12 122617948 122617948 1 + C T HNSC 122617948 + 122617928 122617968 41 GTGAGCCTTCCTGACAGCCTCATCGCGCCCCCTACCGCCCC GTGAGCCTTCCTGACAGCCTTATCGCGCCCCCTACCGCCCC Direct Gain 0 0.976958187620248 0 0.999883055686951 prediction 0.953916375240496 Functional Gain - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122617948 chr12:122617948 synonymous SNV . 0 21 hPsi_associated_SNPs_102357 0 0 1 0 1 chromatin 0 0.438729859519518 0.999766111373902 0 hPsi_site_1317 iPseU_CNN:0.999766111373902;iRNA_PseU:0 1318 chr7 94293040 94293040 1 + G A LUSC 94293040 - 94293020 94293060 41 AGCACCGCGGAGCTCGATGTCATCATCCTCATCCTCAGGGG AGCACCGCGGAGCTCGATGTTATCATCCTCATCCTCAGGGG Direct Gain 0 0.976865151148684 0 0.999999761581421 prediction 0.953730302297369 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293040 chr7:94293040 nonsynonymous SNV 0.007 1 21 hPsi_associated_SNPs_102358 0 0 0 0 0 Endoplasmic reticulum 0 0.438623442308899 0.999999523162842 0 hPsi_site_1318 iPseU_CNN:0.999999523162842;iRNA_PseU:0 1319 chr10 118220751 118220751 1 + G A LUSC 118220751 - 118220731 118220771 41 TAAAGGTGTAATTAAGTCTTCACATCCTGGCATGTGCTTCC TAAAGGTGTAATTAAGTCTTTACATCCTGGCATGTGCTTCC Direct Gain 0 0.976856081784034 0 0.446130126714706 prediction 0.953712163568068 Functional Gain - PNLIPRP3 ENSG00000203837 CDS Human protein_coding chr10:118220751 chr10:118220751 nonsynonymous SNV 0.964 1 21 hPsi_associated_SNPs_102359 0 0 0 0 0 exosome 0 0.438716389767861 0 0 hPsi_site_1319 iPseU_CNN:0;iRNA_PseU:0 1320 chr1 3643744 3643744 1 + G A SKCM 3643744 - 3643724 3643764 41 ATGAGGATGGGCCGCCGGTTCATGCCCCCTACACAGCTGCT ATGAGGATGGGCCGCCGGTTTATGCCCCCTACACAGCTGCT Direct Gain 0 0.976820745803803 0 0.998068511486053 prediction 0.953641491607606 Functional Gain - TP73 ENSG00000078900 CDS Human protein_coding chr1:3643744 chr1:3643744 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102360 0 0 0 0 0 chromatin 0 0.438718594759959 0.996137022972106 0 hPsi_site_1320 iPseU_CNN:0.996137022972106;iRNA_PseU:0 1321 chr10 73051568 73051568 1 + C A rs150945696 73051568 - 73051548 73051588 41 AGGGGCTCACCTGTGCCGGGGATGCTGAGCCTCCCACCCAG AGGGGCTCACCTGTGCCGGGTATGCTGAGCCTCCCACCCAG Direct Gain 0 0.976818320087614 0 0.994262516498566 prediction 0.953636640175227 Functional Gain - UNC5B ENSG00000107731 CDS Human protein_coding chr10:73051568 chr10:73051568 synonymous SNV . 0 21 hPsi_associated_SNPs_102361 0 0 0 0 0 nucleoplasm 0 0.438719546171834 0.988525032997132 0 hPsi_site_1321 iPseU_CNN:0.988525032997132;iRNA_PseU:0 1322 chr8 145694955 145694955 1 + C T LUSC 145694955 + 145694935 145694975 41 CCTGGCCCAGGGGGCACCGTCACCACCTGCTACCGGGGGCG CCTGGCCCAGGGGGCACCGTTACCACCTGCTACCGGGGGCG Direct Gain 0 0.976769276841652 0 0.999437153339386 prediction 0.953538553683305 Functional Gain - KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145694955 chr8:145694955 synonymous SNV . 0 21 hPsi_associated_SNPs_102362 0 0 1 0 2 nucleolus 0 0.43883532026466 0.998874306678772 0 hPsi_site_1322 iPseU_CNN:0.998874306678772;iRNA_PseU:0 1323 chr3 17052122 17052122 1 + G A SKCM 17052122 - 17052102 17052142 41 TAATGAGACAGAGGTTGCTTCATATCCTGACAGACCTTCTT TAATGAGACAGAGGTTGCTTTATATCCTGACAGACCTTCTT Direct Gain 0 0.976767358369601 0 0.982195258140564 prediction 0.953534716739203 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17052122 chr3:17052122 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102363 0 0 0 0 0 nucleus 0 0.438719512854183 0.964390516281128 0 hPsi_site_1323 iPseU_CNN:0.964390516281128;iRNA_PseU:0 1324 chr7 143882673 143882673 1 + C T ACC 143882673 + 143882653 143882693 41 ATGAAGCAACTGGCCCTGGCCTTATTCCTCCACCTCTTGCT ATGAAGCAACTGGCCCTGGCTTTATTCCTCCACCTCTTGCT Direct Gain 0 0.976764631330491 0 0.884113073348999 prediction 0.953529262660981 Functional Gain - CTAGE4 ENSG00000225932 CDS Human protein_coding chr7:143882673 chr7:143882673 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_102364 0 0 0 0 0 exosome 0 0.438718941893591 0.768226146697998 0 hPsi_site_1324 iPseU_CNN:0.768226146697998;iRNA_PseU:0 1325 chr1 3319384 3319384 1 + G A rs185041492 3319384 - 3319364 3319404 41 CTTGGACTGGAAGAGTTCGTCACACTCGTCACAGCGGAACG CTTGGACTGGAAGAGTTCGTTACACTCGTCACAGCGGAACG Direct Gain 0 0.976763478617707 0 1 prediction 0.953526957235413 Functional Gain - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3319384 chr1:3319384 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_102365 0 0 0 0 0 Nucleus 0 0.439865373809997 1 0 hPsi_site_1325 iPseU_CNN:1;iRNA_PseU:0 1326 chr16 30972797 30972797 1 + C T LUAD 30972797 + 30972777 30972817 41 CGGGGCGCCAAGGAAACGGTCAAAAACCTCCACCTTACCTC CGGGGCGCCAAGGAAACGGTTAAAAACCTCCACCTTACCTC Direct Gain 0 0.976759240567289 0 0.999996662139893 prediction 0.953518481134578 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30972797 chr16:30972797 synonymous SNV . 0 21 hPsi_associated_SNPs_102366 0 0 1 0 1 Cytosol 0 0.438727208776191 0.999993324279786 0 hPsi_site_1326 iPseU_CNN:0.999993324279786;iRNA_PseU:0 1327 chrX 26157612 26157612 1 + C A COAD 26157612 - 26157592 26157632 41 AAAAAGGCATAGTAGTGCCTGATGGGATCCACTTCCTTCAA AAAAAGGCATAGTAGTGCCTTATGGGATCCACTTCCTTCAA Direct Gain 0 0.976730720870872 0 0.839133262634277 prediction 0.953461441741744 Functional Gain - MAGEB18 ENSG00000176774 CDS Human protein_coding chrX:26157612 chrX:26157612 synonymous SNV . 0 21 hPsi_associated_SNPs_102367 0 0 0 0 0 unknown 0 0.438802878121234 0.678266525268554 0 hPsi_site_1327 iPseU_CNN:0.678266525268554;iRNA_PseU:0 1328 chr21 30415852 30415852 1 + G T KIRC 30415852 + 30415832 30415872 41 GTTACATAAAAGAGAGAAGTGATATTCCTTCTGGAACAAGT GTTACATAAAAGAGAGAAGTTATATTCCTTCTGGAACAAGT Direct Gain 0 0.976721484231777 0 0.819321751594543 prediction 0.953442968463555 Functional Gain - USP16 ENSG00000156256 CDS Human protein_coding chr21:30415852 chr21:30415852 nonsynonymous SNV 0.775 2 21 hPsi_associated_SNPs_102368 0 0 1 0 1 Ribosome 0 0.438480987478728 0.638643503189086 0 hPsi_site_1328 iPseU_CNN:0.638643503189086;iRNA_PseU:0 1329 chr5 179149909 179149909 1 + G A LAML 179149909 - 179149889 179149929 41 TCAAAAAAAATGTCAGAGGTCATGGACCACAGCTCCAAACC TCAAAAAAAATGTCAGAGGTTATGGACCACAGCTCCAAACC Direct Gain 0 0.976660267695791 0 0.999075055122375 prediction 0.953320535391582 Functional Gain - CANX ENSG00000127022 CDS Human protein_coding chr5:179149909 chr5:179149909 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102369 0 0 0 0 0 Nucleus 0 0.438907378136955 0.99815011024475 0 hPsi_site_1329 iPseU_CNN:0.99815011024475;iRNA_PseU:0 1330 chr19 52719809 52719809 1 + G A SARC 52719809 - 52719789 52719829 41 TGAGGCCAGGGCAGACTTGACATGTTGGTTGGCATCGGACA TGAGGCCAGGGCAGACTTGATATGTTGGTTGGCATCGGACA Direct Gain 0 0.976631490014304 0 0.986813902854919 prediction 0.953262980028608 Functional Gain - PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52719809 chr19:52719809 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102370 0 0 0 0 0 Ribosome 0 0.439739228305342 0.973627805709838 0 hPsi_site_1330 iPseU_CNN:0.973627805709838;iRNA_PseU:0 1331 chr7 141352706 141352706 1 + C T LUAD 141352706 + 141352686 141352726 41 AGGAAGAGAGAACAGATGCTCACAAGCCCCACCCAGTGAGC AGGAAGAGAGAACAGATGCTTACAAGCCCCACCCAGTGAGC Direct Gain 0 0.976622096758573 0 0.995246887207031 prediction 0.953244193517146 Functional Gain - AGK ENSG00000006530 CDS Human protein_coding chr7:141352706 chr7:141352706 synonymous SNV . 0 21 hPsi_associated_SNPs_102371 0 0 1 0 0 Cytosol 0 0.43871157060325 0.990493774414062 0 hPsi_site_1331 iPseU_CNN:0.990493774414062;iRNA_PseU:0 1332 chrX 47065186 47065186 1 + G A rs4339766 47065186 - 47065166 47065206 41 ATCACGGCTCACTGCAGCCTCAACTTCCCAGGCTCCAGCGA ATCACGGCTCACTGCAGCCTTAACTTCCCAGGCTCCAGCGA Direct Gain 0 0.976477420429176 0 0.999994039535522 prediction 0.952954840858351 Functional Gain - INE1 ENSG00000224975 ncRNA_exonic Human sense_intronic chrX:47065186 chrX:47065186 . . 0 21 hPsi_associated_SNPs_102372 0 0 0 0 0 unknown 0 0.43427678209851 0.999988079071044 0 hPsi_site_1332 iPseU_CNN:0.999988079071044;iRNA_PseU:0 1333 chr19 44635974 44635974 1 + G A SKCM 44635974 - 44635954 44635994 41 AAATCCCTTCCCACATTCTTCACATTTGAATGTTGTCTCTC AAATCCCTTCCCACATTCTTTACATTTGAATGTTGTCTCTC Direct Gain 0 0.976410051572936 0 0.974454402923584 prediction 0.952820103145873 Functional Gain - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44635974 chr19:44635974 nonsynonymous SNV 0.647 2 21 hPsi_associated_SNPs_102373 0 0 0 0 0 exosome 0 0.438701296234193 0.948908805847168 0 hPsi_site_1333 iPseU_CNN:0.948908805847168;iRNA_PseU:0 1334 chr10 99079061 99079061 1 + G A rs145308736 99079061 - 99079041 99079081 41 GGAAGCCGGAGCCCGCCAGGCACTCTAGCCGCGCGCCTGCA GGAAGCCGGAGCCCGCCAGGTACTCTAGCCGCGCGCCTGCA Direct Gain 0 0.976403971350007 0 0.99999988079071 prediction 0.952807942700014 Functional Gain - FRAT1 ENSG00000165879 UTR5 Human protein_coding chr10:99079061 chr10:99079061 . . 0 21 hPsi_associated_SNPs_102374 0 0 0 0 0 Ribosome 0 0.438601333393865 0.99999976158142 0 hPsi_site_1334 iPseU_CNN:0.99999976158142;iRNA_PseU:0 1335 chr4 187158058 187158058 1 + C T SKCM 187158058 + 187158038 187158078 41 CATTCGCTGCCAGTTTTTTTCATATGCCACGCAAACATTTC CATTCGCTGCCAGTTTTTTTTATATGCCACGCAAACATTTC Direct Gain 0 0.976393519113098 0 0.995267271995544 prediction 0.952787038226195 Functional Gain - KLKB1 ENSG00000164344 CDS Human protein_coding chr4:187158058 chr4:187158058 nonsynonymous SNV 0.882 3 21 hPsi_associated_SNPs_102375 0 0 0 0 1 Endoplasmic reticulum 0 0.438129768213877 0.990534543991088 0 hPsi_site_1335 iPseU_CNN:0.990534543991088;iRNA_PseU:0 1336 chr15 68937591 68937591 1 + C A LUSC 68937591 - 68937571 68937611 41 TTGTCGTGCACATTCTTGGTGATGGGGATCCCATCGAAGCA TTGTCGTGCACATTCTTGGTTATGGGGATCCCATCGAAGCA Direct Gain 0 0.976384475202784 0 0.994787871837616 prediction 0.952768950405569 Functional Gain - CORO2B ENSG00000103647 CDS Human protein_coding chr15:68937591 chr15:68937591 synonymous SNV . 0 21 hPsi_associated_SNPs_102376 0 0 0 0 0 exosome 0 0.438567665176326 0.989575743675232 0 hPsi_site_1336 iPseU_CNN:0.989575743675232;iRNA_PseU:0 1337 chr19 36223854 36223854 1 + C T CESC 36223854 + 36223834 36223874 41 TGCTGGCCCTAGAGAGGAGTCACTCCCCCCGGCGCCTCCCC TGCTGGCCCTAGAGAGGAGTTACTCCCCCCGGCGCCTCCCC Direct Gain 0 0.976367166833221 0 0.995291173458099 prediction 0.952734333666443 Functional Gain - KMT2B ENSG00000272333 CDS Human protein_coding chr19:36223854 chr19:36223854 nonsynonymous SNV 0.291 2 21 hPsi_associated_SNPs_102377 0 0 1 0 0 chromatin 0 0.438718592990892 0.990582346916198 0 hPsi_site_1337 iPseU_CNN:0.990582346916198;iRNA_PseU:0 1338 chr22 29539828 29539828 1 + C T rs150810838 29539828 + 29539808 29539848 41 CAGTGGGGAAGGAGAGCACTCTTGTCCCCAGTCCCTTGCCA CAGTGGGGAAGGAGAGCACTTTTGTCCCCAGTCCCTTGCCA Direct Gain 0 0.97634354294177 0 0.769850015640259 prediction 0.95268708588354 Functional Gain - KREMEN1 ENSG00000183762 UTR3 Human protein_coding chr22:29539828 chr22:29539828 . . 0 21 hPsi_associated_SNPs_102378 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592995218 0.539700031280518 0 hPsi_site_1338 iPseU_CNN:0.539700031280518;iRNA_PseU:0 1339 chr19 11651950 11651950 1 + G T LUSC 11651950 + 11651930 11651970 41 AGAGAGTGGATCGAGGGGGTGACAGGCCGTCGCATCGGCAA AGAGAGTGGATCGAGGGGGTTACAGGCCGTCGCATCGGCAA Direct Gain 0 0.976311580265847 0 0.997469127178192 prediction 0.952623160531694 Functional Gain - CNN1 ENSG00000130176 CDS Human protein_coding chr19:11651950 chr19:11651950 synonymous SNV . 0 21 hPsi_associated_SNPs_102379 0 0 0 0 2 Cytosol 0 0.438718626539163 0.994938254356384 0 hPsi_site_1339 iPseU_CNN:0.994938254356384;iRNA_PseU:0 1340 chr19 8316045 8316045 1 + G T ESCA 8316045 + 8316025 8316065 41 GGACAGAGCTAGAAGACCGGGATGGCCGTGTCTACCCCCAC GGACAGAGCTAGAAGACCGGTATGGCCGTGTCTACCCCCAC Direct Gain 0 0.97630648209066 0 0.999646365642548 prediction 0.952612964181319 Functional Gain - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8316045 chr19:8316045 nonsynonymous SNV 0.230 2 21 hPsi_associated_SNPs_102380 0 0 1 0 2 chromatin 0 0.43871859275744 0.999292731285096 0 hPsi_site_1340 iPseU_CNN:0.999292731285096;iRNA_PseU:0 1341 chr5 176304243 176304243 1 + G A BLCA 176304243 - 176304223 176304263 41 GTGCAGCGTGAGGTAGATCTCATAGATCTTCCCTCGGGGTA GTGCAGCGTGAGGTAGATCTTATAGATCTTCCCTCGGGGTA Direct Gain 0 0.976235294275461 0 0.999926567077637 prediction 0.952470588550921 Functional Gain - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176304243 chr5:176304243 nonsynonymous SNV 0.986 4 21 hPsi_associated_SNPs_102381 0 0 0 0 0 exosome 0 0.438718696953644 0.999853134155274 0 hPsi_site_1341 iPseU_CNN:0.999853134155274;iRNA_PseU:0 1342 chr1 210010524 210010524 1 + G A rs41274840 210010524 - 210010504 210010544 41 TAACCCTTGGTCTCTGAAGTCATCATCATCACCCACTCCAA TAACCCTTGGTCTCTGAAGTTATCATCATCACCCACTCCAA Direct Gain 0 0.97617949822322 0 0.999830842018127 prediction 0.95235899644644 Functional Gain - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210010524 chr1:210010524 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_102382 0 0 0 0 0 Cytosol 0 0.438718592990865 0.999661684036254 0 hPsi_site_1342 iPseU_CNN:0.999661684036254;iRNA_PseU:0 1343 chr5 135382142 135382142 1 + C T SKCM 135382142 + 135382122 135382162 41 GAGGGGCCCGGCAGCTTCACCATCTTCGCCCCTAGCAACGA GAGGGGCCCGGCAGCTTCACTATCTTCGCCCCTAGCAACGA Direct Gain 0 0.976120334477512 0 0.999298334121704 prediction 0.952240668955024 Functional Gain - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135382142 chr5:135382142 synonymous SNV . 0 21 hPsi_associated_SNPs_102383 0 0 1 0 1 Endoplasmic reticulum 0 0.438689588850161 0.998596668243408 0 hPsi_site_1343 iPseU_CNN:0.998596668243408;iRNA_PseU:0 1344 chr5 35670344 35670344 1 + G A SKCM 35670344 - 35670324 35670364 41 ATGTAGCATTCTAATTATTTCATATCAGTAGGTACCTTATA ATGTAGCATTCTAATTATTTTATATCAGTAGGTACCTTATA Direct Gain 0 0.976092501634767 0 0.992883682250977 prediction 0.952185003269535 Functional Gain - SPEF2 ENSG00000152582 CDS Human protein_coding chr5:35670344 chr5:35670344 nonsynonymous SNV 0.107 0 21 hPsi_associated_SNPs_102384 0 0 0 0 0 Cytosol 0 0.438737153609854 0.985767364501954 0 hPsi_site_1344 iPseU_CNN:0.985767364501954;iRNA_PseU:0 1345 chr2 103090239 103090239 1 + G A LUSC 103090239 - 103090219 103090259 41 CAATTCCAAGGACTGTAAGTCACGAACATCTGCAGAGCCAT CAATTCCAAGGACTGTAAGTTACGAACATCTGCAGAGCCAT Direct Gain 0 0.975997978493177 0 0.996905565261841 prediction 0.951995956986354 Functional Gain - SLC9A4 ENSG00000180251 CDS Human protein_coding chr2:103090239 chr2:103090239 synonymous SNV . 0 21 hPsi_associated_SNPs_102385 0 0 0 0 0 exosome 0 0.438618231343498 0.993811130523682 0 hPsi_site_1345 iPseU_CNN:0.993811130523682;iRNA_PseU:0 1346 chr17 56429764 56429764 1 + G A rs2632519 56429764 - 56429744 56429784 41 CGGGGGCCCGCTGACTACCCCACACAGCCTCCGCCGCGCCC CGGGGGCCCGCTGACTACCCTACACAGCCTCCGCCGCGCCC Direct Gain 0 0.975996726112113 0 0.99774694442749 prediction 0.951993452224226 Functional Gain - TSPOAP1-AS1 ENSG00000265148 ncRNA_exonic Human antisense chr17:56429764 chr17:56429764 . . 0 21 hPsi_associated_SNPs_102386 0 0 0 0 0 unknown 0 0.438718638106294 0.99549388885498 0 hPsi_site_1346 iPseU_CNN:0.99549388885498;iRNA_PseU:0 1347 chr8 134125813 134125813 1 + G A COAD 134125813 - 134125793 134125833 41 CAGAGCCCGGGAGAAGGAGGCATAGTCATCCGTGGAGTGCT CAGAGCCCGGGAGAAGGAGGTATAGTCATCCGTGGAGTGCT Direct Gain 0 0.975988079212155 0 0.998791217803955 prediction 0.951976158424311 Functional Gain - TG ENSG00000042832 CDS Human protein_coding chr8:134125813 chr8:134125813 nonsynonymous SNV 0.805 0 21 hPsi_associated_SNPs_102387 0 0 0 0 0 Nucleus 0 0.438309155915619 0.99758243560791 0 hPsi_site_1347 iPseU_CNN:0.99758243560791;iRNA_PseU:0 1348 chr14 101459616 101459616 1 + G A SKCM 101459616 - 101459596 101459636 41 AGTTCCAGGCACTTAGTATTCATCCTCCATGACTCACACAC AGTTCCAGGCACTTAGTATTTATCCTCCATGACTCACACAC Direct Gain 0 0.975986024409551 0 0.836886048316956 prediction 0.951972048819101 Functional Gain - SNORD114-31 ENSG00000200089 ncRNA_exonic Human snoRNA chr14:101459616 chr14:101459616 . . 0 21 hPsi_associated_SNPs_102388 0 0 0 0 0 unknown 0 0.438724055945983 0.673772096633912 0 hPsi_site_1348 iPseU_CNN:0.673772096633912;iRNA_PseU:0 1349 chrX 23801329 23801329 1 + C T rs138635490 23801329 + 23801309 23801349 41 GCCGACTGGTGTTTATCCGTCACTCGCCGAGGTTCCTTGGG GCCGACTGGTGTTTATCCGTTACTCGCCGAGGTTCCTTGGG Direct Gain 0 0.975969587185765 0 0.999993562698364 prediction 0.951939174371529 Functional Gain - SAT1 ENSG00000130066 UTR5 Human protein_coding chrX:23801329 chrX:23801329 . . 0 21 hPsi_associated_SNPs_102389 0 0 1 0 0 Ribosome 0 0.439697960033435 0.999987125396728 0 hPsi_site_1349 iPseU_CNN:0.999987125396728;iRNA_PseU:0 1350 chr3 140178514 140178514 1 + G A LUSC 140178514 - 140178494 140178534 41 GTGATGGTGAACTGATCGGTCAGGTTCTTGGGCACAATCCC GTGATGGTGAACTGATCGGTTAGGTTCTTGGGCACAATCCC Direct Gain 0 0.975954697177554 0 1 prediction 0.951909394355108 Functional Gain - CLSTN2 ENSG00000158258 CDS Human protein_coding chr3:140178514 chr3:140178514 synonymous SNV . 0 21 hPsi_associated_SNPs_102390 0 0 0 0 0 exosome 0 0.438751379942545 1 0 hPsi_site_1350 iPseU_CNN:1;iRNA_PseU:0 1351 chr6 34791060 34791060 1 + G A BLCA 34791060 - 34791040 34791080 41 CGAGGATCCTCACATGTCTTCATCTCCACCTCTACCTTATC CGAGGATCCTCACATGTCTTTATCTCCACCTCTACCTTATC Direct Gain 0 0.975917183898944 0 0.999972939491272 prediction 0.951834367797888 Functional Gain - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34791060 chr6:34791060 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102391 0 0 0 0 0 Ribosome 0 0.438878881609179 0.999945878982544 0 hPsi_site_1351 iPseU_CNN:0.999945878982544;iRNA_PseU:0 1352 chr11 56020129 56020129 1 + C A LUAD 56020129 - 56020109 56020149 41 GTTGTAGATGGCTACATAGTGATCATAAGCCATTGCAGCCA GTTGTAGATGGCTACATAGTTATCATAAGCCATTGCAGCCA Direct Gain 0 0.975897657147143 0 0.689834594726562 prediction 0.951795314294286 Functional Gain - OR5T3 ENSG00000172489 CDS Human protein_coding chr11:56020129 chr11:56020129 nonsynonymous SNV 0.988 2 21 hPsi_associated_SNPs_102392 0 0 0 0 0 unknown 0 0.438827294228013 0.379669189453124 0 hPsi_site_1352 iPseU_CNN:0.379669189453124;iRNA_PseU:0 1353 chr12 6993961 6993961 1 + G A rs782394588 6993961 - 6993941 6993981 41 GCATCTGATGCACAACAGGTCATCTTCGCCCACCACCACAG GCATCTGATGCACAACAGGTTATCTTCGCCCACCACCACAG Direct Gain 0 0.975876268176539 0 0.999933362007141 prediction 0.951752536353078 Functional Gain - DSTNP2 ENSG00000248593 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr12:6993961 chr12:6993961 . . 0 21 hPsi_associated_SNPs_102393 0 0 0 0 0 unknown 0 0.43830194641904 0.999866724014282 0 hPsi_site_1353 iPseU_CNN:0.999866724014282;iRNA_PseU:0 1354 chr3 128971781 128971781 1 + C T UCEC 128971781 + 128971761 128971801 41 TCTTGCATTGCAGAGGATGTCATCATTGTCACCAGCAGGCA TCTTGCATTGCAGAGGATGTTATCATTGTCACCAGCAGGCA Direct Gain 0 0.975872739288815 0 0.000534176826477051 prediction 0.95174547857763 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128971781 chr3:128971781 synonymous SNV . 0 21 hPsi_associated_SNPs_102394 0 0 1 0 1 Nucleus 0 0.438717673535176 0 0 hPsi_site_1354 iPseU_CNN:0;iRNA_PseU:0 1355 chr5 161324325 161324325 1 + C A OV 161324325 - 161324305 161324345 41 GCAGCGGGAAGGCTATTCTTGACAGTCGGTCAATTTTGCTG GCAGCGGGAAGGCTATTCTTTACAGTCGGTCAATTTTGCTG Direct Gain 0 0.975866089825475 0 0.999989867210388 prediction 0.951732179650949 Functional Gain - GABRA1 ENSG00000022355 CDS Human protein_coding chr5:161324325 chr5:161324325 stopgain 1.000 1 21 hPsi_associated_SNPs_102395 0 0 0 0 0 unknown 0 0.438718803216565 0.999979734420776 0 hPsi_site_1355 iPseU_CNN:0.999979734420776;iRNA_PseU:0 1356 chr2 97033106 97033106 1 + G A LIHC 97033106 - 97033086 97033126 41 GCAAGAGCATCTGACCTCTGCATCTGCCTCCTTTCCGGAGA GCAAGAGCATCTGACCTCTGTATCTGCCTCCTTTCCGGAGA Direct Gain 0 0.975863192505848 0 0.982374668121338 prediction 0.951726385011696 Functional Gain - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97033106 chr2:97033106 nonsynonymous SNV 0.079 0 21 hPsi_associated_SNPs_102396 0 0 0 0 0 Cytosol 0 0.438717162105277 0.964749336242676 0 hPsi_site_1356 iPseU_CNN:0.964749336242676;iRNA_PseU:0 1357 chr5 139622995 139622995 1 + G A ESCA 139622995 - 139622975 139623015 41 GACGGCTGGGCTGGTCTGGTCAGGTGAGCATGTCCCAGAGA GACGGCTGGGCTGGTCTGGTTAGGTGAGCATGTCCCAGAGA Direct Gain 0 0.975767944179956 0 0.99730658531189 prediction 0.951535888359912 Functional Gain - CYSTM1 ENSG00000120306 CDS Human protein_coding chr5:139622995 chr5:139622995 synonymous SNV . 0 21 hPsi_associated_SNPs_102397 0 0 0 0 0 Ribosome 0 0.454230114009311 0.99461317062378 0 hPsi_site_1357 iPseU_CNN:0.99461317062378;iRNA_PseU:0 1358 chr14 24571980 24571980 1 + C T COAD 24571980 + 24571960 24572000 41 AGGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGATTTT AGGTGACAAGGAGCCCTGTGTACATCCCAACTCTCGATTTT Direct Gain 0 0.975747389293068 0 0.999723732471466 prediction 0.951494778586137 Functional Gain - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24571980 chr14:24571980 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102398 0 0 1 0 1 Endoplasmic reticulum 0 0.438887115330079 0.999447464942932 0 hPsi_site_1358 iPseU_CNN:0.999447464942932;iRNA_PseU:0 1359 chr17 17250697 17250697 1 + G T rs185625494 17250697 + 17250677 17250717 41 CTGAGGTGCTTCCAGGTGGGGACAAGCCCCTCTTGGTCTCA CTGAGGTGCTTCCAGGTGGGTACAAGCCCCTCTTGGTCTCA Direct Gain 0 0.975744480168192 0 0.999995589256287 prediction 0.951488960336383 Functional Gain - NT5M ENSG00000205309 UTR3 Human protein_coding chr17:17250697 chr17:17250697 . . 0 21 hPsi_associated_SNPs_102399 0 0 0 0 0 Cytosol 0 0.438718593084564 0.999991178512574 0 hPsi_site_1359 iPseU_CNN:0.999991178512574;iRNA_PseU:0 1360 chr6 158342618 158342618 1 + G A COAD 158342618 - 158342598 158342638 41 GGATGGCGACACATCCTGGTCATCCAGGCCTGAAGTCTCTC GGATGGCGACACATCCTGGTTATCCAGGCCTGAAGTCTCTC Direct Gain 0 0.975719405362084 0 0.996187031269073 prediction 0.951438810724168 Functional Gain - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158342618 chr6:158342618 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102400 0 0 0 0 0 Ribosome 0 0.43864217217527 0.992374062538146 0 hPsi_site_1360 iPseU_CNN:0.992374062538146;iRNA_PseU:0 1361 chr11 14278235 14278235 1 + G A LUAD 14278235 - 14278215 14278255 41 AAAAGAAAACAACGTACCTTCATCTTTCTCTTCTGGAGCCA AAAAGAAAACAACGTACCTTTATCTTTCTCTTCTGGAGCCA Direct Gain 0 0.975693914762422 0 0.932680368423462 prediction 0.951387829524843 Functional Gain - SPON1 ENSG00000152268 ncRNA_exonic Human other chr11:14278235 chr11:14278235 . 1.000 1 21 hPsi_associated_SNPs_102401 0 0 0 0 0 chromatin 0 0.438718602015409 0.865360736846924 0 hPsi_site_1361 iPseU_CNN:0.865360736846924;iRNA_PseU:0 1362 chr14 103574805 103574805 1 + G T BLCA 103574805 + 103574785 103574825 41 TGGGCGAGACCTACAAAGATGACATCCAGCGGCACCTGGAG TGGGCGAGACCTACAAAGATTACATCCAGCGGCACCTGGAG Direct Gain 0 0.975682334736956 0 0.999671936035156 prediction 0.951364669473912 Functional Gain - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103574805 chr14:103574805 nonsynonymous SNV 0.641 2 21 hPsi_associated_SNPs_102402 0 0 0 0 1 cytosol 0 0.440736629724586 0.999343872070312 0 hPsi_site_1362 iPseU_CNN:0.999343872070312;iRNA_PseU:0 1363 chr16 16138403 16138403 1 + C T COAD 16138403 + 16138383 16138423 41 GAGGTGGAGGCTTTGATCGTCAAGTCCCCACAGAAGGAGTG GAGGTGGAGGCTTTGATCGTTAAGTCCCCACAGAAGGAGTG Direct Gain 0 0.97556577282195 0 0.99997878074646 prediction 0.9511315456439 Functional Gain - ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16138403 chr16:16138403 synonymous SNV . 0 21 hPsi_associated_SNPs_102403 0 0 1 0 1 Mitochondrion 0 0.4387185919518 0.99995756149292 0 hPsi_site_1363 iPseU_CNN:0.99995756149292;iRNA_PseU:0 1364 chr19 10221425 10221425 1 + G A LUSC 10221425 - 10221405 10221445 41 TGAAGGGATCCCAGAGGCCTCTTCATCACTACCCCCGACCC TGAAGGGATCCCAGAGGCCTTTTCATCACTACCCCCGACCC Direct Gain 0 0.975471925897964 0 0.912532210350037 prediction 0.950943851795929 Functional Gain - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10221425 chr19:10221425 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_102404 0 0 0 0 0 unknown 0 0.438702695484023 0.825064420700074 0 hPsi_site_1364 iPseU_CNN:0.825064420700074;iRNA_PseU:0 1365 chr12 131357571 131357571 1 + C A ESCA 131357571 - 131357551 131357591 41 GTTGGTGTGGAACACTAGGGGATGAACCTCAACACCCAAGG GTTGGTGTGGAACACTAGGGTATGAACCTCAACACCCAAGG Direct Gain 0 0.975465633499315 0 0.999811291694641 prediction 0.950931266998631 Functional Gain - RAN ENSG00000132341 CDS Human protein_coding chr12:131357571 chr12:131357571 nonsynonymous SNV 0.357 2 21 hPsi_associated_SNPs_102405 0 0 0 0 0 Ribosome 0 0.438718718209787 0.999622583389282 0 hPsi_site_1365 iPseU_CNN:0.999622583389282;iRNA_PseU:0 1366 chr1 67390754 67390754 1 + G A ESCA 67390754 - 67390734 67390774 41 GCTGCCGCTGCTGCCGCCGCCACCTTCGCTGCTGCCGCCAC GCTGCCGCTGCTGCCGCCGCTACCTTCGCTGCTGCCGCCAC Direct Gain 0 0.975451075063635 0 0.976053953170776 prediction 0.95090215012727 Functional Gain - MIER1 ENSG00000198160 CDS Human protein_coding chr1:67390754 chr1:67390754 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_102406 0 0 0 0 0 Ribosome 0 0.438718592992306 0.952107906341552 0 hPsi_site_1366 iPseU_CNN:0.952107906341552;iRNA_PseU:0 1367 chr2 189868776 189868776 1 + C A LUSC 189868776 - 189868756 189868796 41 GGGCTGCCAGGAGCACCAGTGTTACCCGCAGGACCTGGGGG GGGCTGCCAGGAGCACCAGTTTTACCCGCAGGACCTGGGGG Direct Gain 0 0.975444114620148 0 0.999738931655884 prediction 0.950888229240297 Functional Gain - COL3A1 ENSG00000168542 CDS Human protein_coding chr2:189868776 chr2:189868776 nonsynonymous SNV 0.714 2 21 hPsi_associated_SNPs_102407 0 0 0 0 0 Endoplasmic reticulum 0 0.438718408540684 0.999477863311768 0 hPsi_site_1367 iPseU_CNN:0.999477863311768;iRNA_PseU:0 1368 chr8 22051977 22051977 1 + G A SKCM 22051977 - 22051957 22051997 41 ATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGC ATGTGGCCATAGTCCTTTTTTACATCACCCCCGCAGATGGC Direct Gain 0 0.975431105069657 0 0.985525608062744 prediction 0.950862210139314 Functional Gain - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22051977 chr8:22051977 synonymous SNV . 0 21 hPsi_associated_SNPs_102408 1 0 0 0 0 Endoplasmic reticulum 0 0.438718598745732 0.971051216125488 0 hPsi_site_1368 iPseU_CNN:0.971051216125488;iRNA_PseU:0 1369 chr4 126367576 126367576 1 + G T LUAD 126367576 + 126367556 126367596 41 AGTGGTCTGCAGTGATGCGGGATCCCCAGAGCCTCTTTCCA AGTGGTCTGCAGTGATGCGGTATCCCCAGAGCCTCTTTCCA Direct Gain 0 0.975430199913189 0 0.979267835617065 prediction 0.950860399826379 Functional Gain - FAT4 ENSG00000196159 CDS Human protein_coding chr4:126367576 chr4:126367576 nonsynonymous SNV 0.138 3 21 hPsi_associated_SNPs_102409 0 0 0 0 0 Endoplasmic reticulum 0 0.438721938071186 0.95853567123413 0 hPsi_site_1369 iPseU_CNN:0.95853567123413;iRNA_PseU:0 1370 chrX 69712027 69712027 1 + G T STAD 69712027 + 69712007 69712047 41 GGCTCAGCTTCTCTTATGGTGACATTCTGCATGTCATTAAT GGCTCAGCTTCTCTTATGGTTACATTCTGCATGTCATTAAT Direct Gain 0 0.975417601187484 0 0.994394421577454 prediction 0.950835202374968 Functional Gain - DLG3 ENSG00000082458 CDS Human protein_coding chrX:69712027 chrX:69712027 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_102410 0 0 1 0 1 Ribosome 0 0.437362955658969 0.988788843154908 0 hPsi_site_1370 iPseU_CNN:0.988788843154908;iRNA_PseU:0 1371 chr1 237660050 237660050 1 + C T LUAD 237660050 + 237660030 237660070 41 TGATGGCCTTCATCTCTGGTCAGGTACGTACTATCCATTTT TGATGGCCTTCATCTCTGGTTAGGTACGTACTATCCATTTT Direct Gain 0 0.975410337583914 0 0.9992995262146 prediction 0.950820675167828 Functional Gain - RYR2 ENSG00000198626 CDS Human protein_coding chr1:237660050 chr1:237660050 nonsynonymous SNV 0.989 2 21 hPsi_associated_SNPs_102411 0 0 0 0 1 nucleolus 0 0.438569958705511 0.9985990524292 0 hPsi_site_1371 iPseU_CNN:0.9985990524292;iRNA_PseU:0 1372 chr1 112999355 112999355 1 + C A OV 112999355 - 112999335 112999375 41 AGGAGGCAGTGCTGCTGGGAGACAGTGAGCTCCCACTGGAA AGGAGGCAGTGCTGCTGGGATACAGTGAGCTCCCACTGGAA Direct Gain 0 0.975388645855237 0 0.998977303504944 prediction 0.950777291710474 Functional Gain - CTTNBP2NL ENSG00000143079 CDS Human protein_coding chr1:112999355 chr1:112999355 nonsynonymous SNV 0.988 4 21 hPsi_associated_SNPs_102412 0 0 0 0 0 Ribosome 0 0.438718671801815 0.997954607009888 0 hPsi_site_1372 iPseU_CNN:0.997954607009888;iRNA_PseU:0 1373 chr20 47896871 47896871 1 + G A LUSC 47896871 - 47896851 47896891 41 GTCGGGGAAAAAAGCTAAGTCATCATATATGCCAGCAGGAA GTCGGGGAAAAAAGCTAAGTTATCATATATGCCAGCAGGAA Direct Gain 0 0.975382747675283 0 0.775558710098267 prediction 0.950765495350566 Functional Gain - SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896871 chr20:47896871 . . 0 21 hPsi_associated_SNPs_102413 0 0 0 0 0 unknown 0 0.438718590797123 0.551117420196534 0 hPsi_site_1373 iPseU_CNN:0.551117420196534;iRNA_PseU:0 1374 chr6 38810541 38810541 1 + G A LIHC 38810541 - 38810521 38810561 41 TGTTTCATGGCCTTATTGGTCATCATTTCCAGTAGAGGACA TGTTTCATGGCCTTATTGGTTATCATTTCCAGTAGAGGACA Direct Gain 0 0.975380784748151 0 0.99060583114624 prediction 0.950761569496302 Functional Gain - DNAH8 ENSG00000124721 CDS Human protein_coding chr6:38810541 chr6:38810541 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102414 0 0 0 0 0 chromatin 0 0.438598173074903 0.98121166229248 0 hPsi_site_1374 iPseU_CNN:0.98121166229248;iRNA_PseU:0 1375 chr22 35947656 35947656 1 + G A SKCM 35947656 - 35947636 35947676 41 AGCTCCGCCGCCTCCTTGGTCTTGTTCTTCAGGCAGGACTT AGCTCCGCCGCCTCCTTGGTTTTGTTCTTCAGGCAGGACTT Direct Gain 0 0.975380514047083 0 0.991754710674286 prediction 0.950761028094165 Functional Gain - RASD2 ENSG00000100302 CDS Human protein_coding chr22:35947656 chr22:35947656 synonymous SNV . 0 21 hPsi_associated_SNPs_102415 0 0 0 0 0 exosome 0 0.43871411254836 0.983509421348572 0 hPsi_site_1375 iPseU_CNN:0.983509421348572;iRNA_PseU:0 1376 chr12 2787022 2787022 1 + G A ESCA 2787022 - 2787002 2787042 41 ACCACCCACCCTGAAGATGTCATCTTCAGAAGCAGCGGACA ACCACCCACCCTGAAGATGTTATCTTCAGAAGCAGCGGACA Direct Gain 0 0.975373921512808 0 0.993720650672913 prediction 0.950747843025616 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2787022 chr12:2787022 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_102416 0 0 0 0 1 Cytosol 0 0.438718892400894 0.987441301345826 0 hPsi_site_1376 iPseU_CNN:0.987441301345826;iRNA_PseU:0 1377 chr4 77660935 77660935 1 + G A BLCA 77660935 - 77660915 77660955 41 CTCCACTGGGGACAGCAAGTCATGTTCTAAGGGCTGGCAGA CTCCACTGGGGACAGCAAGTTATGTTCTAAGGGCTGGCAGA Direct Gain 0 0.97535408673895 0 0.999926030635834 prediction 0.9507081734779 Functional Gain - SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77660935 chr4:77660935 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102417 0 0 0 0 0 Ribosome 0 0.438718412905372 0.999852061271668 0 hPsi_site_1377 iPseU_CNN:0.999852061271668;iRNA_PseU:0 1378 chr22 24573530 24573530 1 + G A LUSC 24573530 - 24573510 24573550 41 GGAGAGCTCAGGGGCTGAGTCTCACTCGCAGCCTCCTGAGC GGAGAGCTCAGGGGCTGAGTTTCACTCGCAGCCTCCTGAGC Direct Gain 0 0.975345033295871 0 0.999999642372131 prediction 0.950690066591742 Functional Gain - CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573530 chr22:24573530 synonymous SNV . 0 21 hPsi_associated_SNPs_102418 0 0 0 0 0 Cytosol 0 0.438718506157594 0.999999284744262 0 hPsi_site_1378 iPseU_CNN:0.999999284744262;iRNA_PseU:0 1379 chr11 1248370 1248370 1 + G A rs568952450 1248370 - 1248350 1248390 41 AGGGGGCTTCCTCACCAGGGCACTGTCCTCTCCGTTCCACA AGGGGGCTTCCTCACCAGGGTACTGTCCTCTCCGTTCCACA Direct Gain 0 0.975329203662798 0 0.989804804325104 prediction 0.950658407325596 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1248370 chr11:1248370 nonsynonymous SNV 0.862 0 21 hPsi_associated_SNPs_102419 0 0 0 0 0 Endoplasmic reticulum 0 0.4387185929951 0.979609608650208 0 hPsi_site_1379 iPseU_CNN:0.979609608650208;iRNA_PseU:0 1380 chr2 135711902 135711902 1 + C T UCEC 135711902 + 135711882 135711922 41 GAGGCTGCATGTCAATGATGCATCTCACAACCACCACTCCA GAGGCTGCATGTCAATGATGTATCTCACAACCACCACTCCA Direct Gain 0 0.975305817563129 0 0.999982833862305 prediction 0.950611635126258 Functional Gain - CCNT2 ENSG00000082258 CDS Human protein_coding chr2:135711902 chr2:135711902 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_102420 0 0 1 0 1 Nucleus 0 0.439515177950163 0.99996566772461 0 hPsi_site_1380 iPseU_CNN:0.99996566772461;iRNA_PseU:0 1381 chr1 110169022 110169022 1 + C T SKCM 110169022 + 110169002 110169042 41 GAACGGGAGTTTCAGCGGGTCACCATCTCTGGGGAGGAGAA GAACGGGAGTTTCAGCGGGTTACCATCTCTGGGGAGGAGAA Direct Gain 0 0.975272398507657 0 0.494685590267181 prediction 0.950544797015314 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110169022 chr1:110169022 synonymous SNV . 0 21 hPsi_associated_SNPs_102421 0 0 1 0 2 Cytosol 0 0.438559157354139 0 0 hPsi_site_1381 iPseU_CNN:0;iRNA_PseU:0 1382 chr2 71901350 71901350 1 + G A OV 71901350 - 71901330 71901370 41 GCTGGGATTTTGCTCTCAGTCTTGTCCAGCCTCCAGAAGGC GCTGGGATTTTGCTCTCAGTTTTGTCCAGCCTCCAGAAGGC Direct Gain 0 0.975267662761372 0 0.97953075170517 prediction 0.950535325522744 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71901350 chr2:71901350 synonymous SNV . 0 21 hPsi_associated_SNPs_102422 0 0 0 0 0 Nucleus 0 0.438718590498153 0.95906150341034 0 hPsi_site_1382 iPseU_CNN:0.95906150341034;iRNA_PseU:0 1383 chr6 159052852 159052852 1 + G A BLCA 159052852 - 159052832 159052872 41 GTTCTGCAGCGGCATTTCCTCATAGTCACTCCTGTGAGCAA GTTCTGCAGCGGCATTTCCTTATAGTCACTCCTGTGAGCAA Direct Gain 0 0.97524292023895 0 0.717649698257446 prediction 0.9504858404779 Functional Gain - TMEM181 ENSG00000146433 CDS Human protein_coding chr6:159052852 chr6:159052852 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102423 0 0 0 0 0 Ribosome 0 0.438717892455117 0.435299396514892 0 hPsi_site_1383 iPseU_CNN:0.435299396514892;iRNA_PseU:0 1384 chr19 7694737 7694737 1 + G T UCEC 7694737 + 7694717 7694757 41 GAGATGGGGGTGAAGCTGGAGATATTTCGGGTCAGTGGACA GAGATGGGGGTGAAGCTGGATATATTTCGGGTCAGTGGACA Direct Gain 0 0.9752342152382 0 0.956210970878601 prediction 0.950468430476399 Functional Gain - PET100 ENSG00000229833;ENSG00000268400 CDS Human other chr19:7694737 chr19:7694737 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102424 0 0 1 0 1 Ribosome 0 0.438719548967872 0.912421941757202 0 hPsi_site_1384 iPseU_CNN:0.912421941757202;iRNA_PseU:0 1385 chrX 70643024 70643024 1 + G A BLCA 70643024 - 70643004 70643044 41 GAAAGAAAACGCCACTTGGTCATCATCATCCAGCAAGGGGT GAAAGAAAACGCCACTTGGTTATCATCATCCAGCAAGGGGT Direct Gain 0 0.975229805390941 0 0.976869225502014 prediction 0.950459610781882 Functional Gain - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70643024 chrX:70643024 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102425 0 0 0 0 0 Cytosol 0 0.43871572573455 0.953738451004028 0 hPsi_site_1385 iPseU_CNN:0.953738451004028;iRNA_PseU:0 1386 chr3 193366646 193366646 1 + T A COAD 193366646 - 193366626 193366666 41 ACTTACCAATGTTTTGGTGTAACCTGGCTCAGACTGATAAC ACTTACCAATGTTTTGGTGTTACCTGGCTCAGACTGATAAC Direct Gain 0 0.975128999827964 0 0.523183763027191 prediction 0.950257999655928 Functional Gain - OPA1 ENSG00000198836 CDS Human protein_coding chr3:193366646 chr3:193366646 synonymous SNV . 0 21 hPsi_associated_SNPs_102426 0 0 0 0 0 Nucleus 0 0.438710292757127 0.0463675260543821 0 hPsi_site_1386 iPseU_CNN:0.0463675260543821;iRNA_PseU:0 1387 chr1 28863318 28863318 1 + G A LIHC 28863318 - 28863298 28863338 41 GGTGGGTATGCTCTTCTCCTCAGCACCCTCTCCAAGGCCCA GGTGGGTATGCTCTTCTCCTTAGCACCCTCTCCAAGGCCCA Direct Gain 0 0.975121632139572 0 0.292959034442902 prediction 0.950243264279143 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28863318 chr1:28863318 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102427 0 0 0 0 0 Ribosome 0 0.43871859303326 0 0 hPsi_site_1387 iPseU_CNN:0;iRNA_PseU:0 1388 chr1 201177445 201177445 1 + G A rs115832654 201177445 - 201177425 201177465 41 TGGACCCCCAGAGCCATCTTCATAGCCTCCTTCTCCAAAGG TGGACCCCCAGAGCCATCTTTATAGCCTCCTTCTCCAAAGG Direct Gain 0 0.97510855098601 0 0.988317787647247 prediction 0.950217101972021 Functional Gain - IGFN1 ENSG00000163395 CDS Human protein_coding chr1:201177445 chr1:201177445 nonsynonymous SNV 0.015 2 21 hPsi_associated_SNPs_102428 0 0 0 0 0 exosome 0 0.43872105405366 0.976635575294494 0 hPsi_site_1388 iPseU_CNN:0.976635575294494;iRNA_PseU:0 1389 chr11 10800647 10800647 1 + G A UCEC 10800647 - 10800627 10800667 41 TTGATGAAATAAAACCTAGTCACTATCATCTGACCCATGTT TTGATGAAATAAAACCTAGTTACTATCATCTGACCCATGTT Direct Gain 0 0.975097609448639 0 0.997365593910217 prediction 0.950195218897277 Functional Gain - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10800647 chr11:10800647 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102429 0 0 0 0 0 Cytosol 0 0.438718375643613 0.994731187820434 0 hPsi_site_1389 iPseU_CNN:0.994731187820434;iRNA_PseU:0 1390 chr15 86814893 86814893 1 + C T COAD 86814893 + 86814873 86814913 41 GTGAAGGAGGCTCTTCTTGGCAAACCCACCTGGATAAGGAC GTGAAGGAGGCTCTTCTTGGTAAACCCACCTGGATAAGGAC Direct Gain 0 0.975078562306263 0 0.999067306518555 prediction 0.950157124612526 Functional Gain - AGBL1 ENSG00000166748 CDS Human other chr15:86814893 chr15:86814893 synonymous SNV . 0 21 hPsi_associated_SNPs_102430 0 0 0 0 2 exosome 0 0.438718592995093 0.99813461303711 0 hPsi_site_1390 iPseU_CNN:0.99813461303711;iRNA_PseU:0 1391 chr4 39448794 39448794 1 + C T COAD 39448794 + 39448774 39448814 41 GAAAGGAGGCTGCTCAAGGGCACGGTCGACTTCTGCGCGCT GAAAGGAGGCTGCTCAAGGGTACGGTCGACTTCTGCGCGCT Direct Gain 0 0.97507754422468 0 0.999997437000275 prediction 0.95015508844936 Functional Gain - KLB ENSG00000134962 CDS Human protein_coding chr4:39448794 chr4:39448794 synonymous SNV . 0 21 hPsi_associated_SNPs_102431 0 0 0 0 0 Cytosol 0 0.438696038248872 0.99999487400055 0 hPsi_site_1391 iPseU_CNN:0.99999487400055;iRNA_PseU:0 1392 chr22 46506523 46506523 1 + G T rs183577141 46506523 + 46506503 46506543 41 AGAGGAGCTGGGATGGCCTTGATCTTCCCCCTCCGGCCACT AGAGGAGCTGGGATGGCCTTTATCTTCCCCCTCCGGCCACT Direct Gain 0 0.975059802229487 0 0.999844670295715 prediction 0.950119604458975 Functional Gain - MIRLET7BHG ENSG00000197182 UTR3 Human lincRNA chr22:46506523 chr22:46506523 . . 0 21 hPsi_associated_SNPs_102432 0 0 1 0 0 Nucleus 0 0.438718593626838 0.99968934059143 0 hPsi_site_1392 iPseU_CNN:0.99968934059143;iRNA_PseU:0 1393 chrX 54951451 54951451 1 + G A ESCA 54951451 - 54951431 54951471 41 GATTTCTGGGAAATATTCATCATATTCTTGGATGACATCCC GATTTCTGGGAAATATTCATTATATTCTTGGATGACATCCC Direct Gain 0 0.975012361590175 0 0.966302871704102 prediction 0.95002472318035 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54951451 chrX:54951451 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_102433 0 0 0 0 0 exosome 0 0.438718579658676 0.932605743408204 0 hPsi_site_1393 iPseU_CNN:0.932605743408204;iRNA_PseU:0 1394 chr22 34129030 34129030 1 + C A rs150074341 34129030 - 34129010 34129050 41 GAATGGTAAATGATATGGGGGACATTATCATAGGCGGCCAT GAATGGTAAATGATATGGGGTACATTATCATAGGCGGCCAT Direct Gain 0 0.974977899926577 0 0.96949315071106 prediction 0.949955799853154 Functional Gain - LARGE-AS1 ENSG00000224973 ncRNA_exonic Human processed_transcript chr22:34129030 chr22:34129030 . . 0 21 hPsi_associated_SNPs_102434 0 0 1 0 0 unknown 0 0.438716796182612 0.93898630142212 0 hPsi_site_1394 iPseU_CNN:0.93898630142212;iRNA_PseU:0 1395 chr11 27680049 27680049 1 + C T SKCM 27680049 + 27680029 27680069 41 CCTCGGATGTTTGCTTCTTTCATGGGGGCAGCCTTCATGCA CCTCGGATGTTTGCTTCTTTTATGGGGGCAGCCTTCATGCA Direct Gain 0 0.974947475364368 0 0.998770594596863 prediction 0.949894950728736 Functional Gain - BDNF ENSG00000176697 CDS Human protein_coding chr11:27680049 chr11:27680049 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_102435 0 0 0 0 1 exosome 0 0.438718592947985 0.997541189193726 0 hPsi_site_1395 iPseU_CNN:0.997541189193726;iRNA_PseU:0 1396 chr10 47087272 47087272 1 + C A BLCA 47087272 - 47087252 47087292 41 AGGACACAGGCAATGACCCAGATGAGCACAATCCCCAGGTA AGGACACAGGCAATGACCCATATGAGCACAATCCCCAGGTA Direct Gain 0 0.974946980218006 0 0.997515022754669 prediction 0.949893960436013 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087272 chr10:47087272 synonymous SNV . 0 21 hPsi_associated_SNPs_102436 0 0 0 0 0 unknown 0 0.439785671236197 0.995030045509338 0 hPsi_site_1396 iPseU_CNN:0.995030045509338;iRNA_PseU:0 1397 chr12 119617130 119617130 1 + C T LUSC 119617130 + 119617110 119617150 41 CAGCCACCATGGCTGACGGTCAGATGCCCTTCTCCTGCCAC CAGCCACCATGGCTGACGGTTAGATGCCCTTCTCCTGCCAC Direct Gain 0 0.974877047860153 0 0.999972701072693 prediction 0.949754095720306 Functional Gain - HSPB8 ENSG00000152137 CDS Human protein_coding chr12:119617130 chr12:119617130 stopgain 0.991 0 21 hPsi_associated_SNPs_102437 0 0 0 0 0 exosome 0 0.439291622658403 0.999945402145386 0 hPsi_site_1397 iPseU_CNN:0.999945402145386;iRNA_PseU:0 1398 chr2 27522173 27522173 1 + C A OV 27522173 - 27522153 27522193 41 CAGCTCAGGCAGTAAATATTGATCTTCTCTTCTTCATGCTC CAGCTCAGGCAGTAAATATTTATCTTCTCTTCTTCATGCTC Direct Gain 0 0.97477762154362 0 0.91852080821991 prediction 0.949555243087241 Functional Gain - TRIM54 ENSG00000138100 CDS Human protein_coding chr2:27522173 chr2:27522173 synonymous SNV . 0 21 hPsi_associated_SNPs_102438 0 0 0 0 0 Nucleus 0 0.438716466213112 0.83704161643982 0 hPsi_site_1398 iPseU_CNN:0.83704161643982;iRNA_PseU:0 1399 chr11 57369521 57369521 1 + C A STAD 57369521 - 57369501 57369541 41 CTCTCCAGGTTTGTTTTGGTGTTCTCCCCAGCCCCTGCAAC CTCTCCAGGTTTGTTTTGGTTTTCTCCCCAGCCCCTGCAAC Direct Gain 0 0.974770163207046 0 0.942329943180084 prediction 0.949540326414092 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57369521 chr11:57369521 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_102439 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593936793 0.884659886360168 0 hPsi_site_1399 iPseU_CNN:0.884659886360168;iRNA_PseU:0 1400 chrX 69498463 69498463 1 + G A UCEC 69498463 - 69498443 69498483 41 AGAGGCCAGGTTGGTATCTTCATGCTTAAGTTTGCCATCCA AGAGGCCAGGTTGGTATCTTTATGCTTAAGTTTGCCATCCA Direct Gain 0 0.97474078951901 0 0.999716222286224 prediction 0.949481579038019 Functional Gain - ARR3 ENSG00000120500 CDS Human protein_coding chrX:69498463 chrX:69498463 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_102440 0 0 0 0 0 Cytosol 0 0.440161966925599 0.999432444572448 0 hPsi_site_1400 iPseU_CNN:0.999432444572448;iRNA_PseU:0 1401 chr3 134278244 134278244 1 + G A STAD 134278244 - 134278224 134278264 41 ATAAACTCTTCTTGGTCATTCATACTCTCAGACATAGTGTC ATAAACTCTTCTTGGTCATTTATACTCTCAGACATAGTGTC Direct Gain 0 0.974724701462283 0 0.999009013175964 prediction 0.949449402924567 Functional Gain - CEP63 ENSG00000182923 CDS Human protein_coding chr3:134278244 chr3:134278244 nonsynonymous SNV 0.910 0 21 hPsi_associated_SNPs_102441 0 0 0 0 0 nucleolus 0 0.438792401398958 0.998018026351928 0 hPsi_site_1401 iPseU_CNN:0.998018026351928;iRNA_PseU:0 1402 chrX 17168592 17168592 1 + C T rs191036932 17168592 + 17168572 17168612 41 ATGTGGCATATTGCTTTTGCCACTTTCCTATCCAGCAGACA ATGTGGCATATTGCTTTTGCTACTTTCCTATCCAGCAGACA Direct Gain 0 0.974709999793373 0 0.970404028892517 prediction 0.949419999586747 Functional Gain - REPS2 ENSG00000169891 UTR3 Human protein_coding chrX:17168592 chrX:17168592 . . 0 21 hPsi_associated_SNPs_102442 0 0 0 0 0 Nucleus 0 0.438730649615135 0.940808057785034 0 hPsi_site_1402 iPseU_CNN:0.940808057785034;iRNA_PseU:0 1403 chr4 166999063 166999063 1 + G A SKCM 166999063 - 166999043 166999083 41 TGGACTGTGGATCTTCTGTTCACACTCAGCTGCACCAATAA TGGACTGTGGATCTTCTGTTTACACTCAGCTGCACCAATAA Direct Gain 0 0.974708862915416 0 0.999683976173401 prediction 0.949417725830833 Functional Gain - TLL1 ENSG00000038295 CDS Human protein_coding chr4:166999063 chr4:166999063 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102443 0 0 0 0 0 nucleus 0 0.437854867663522 0.999367952346802 0 hPsi_site_1403 iPseU_CNN:0.999367952346802;iRNA_PseU:0 1404 chr7 104719391 104719391 1 + C T BLCA 104719391 + 104719371 104719411 41 GGCTCGATTCATCAGGCGGTCTTGTACACCCAATGCAGAGG GGCTCGATTCATCAGGCGGTTTTGTACACCCAATGCAGAGG Direct Gain 0 0.974698973873405 0 0.821275651454926 prediction 0.949397947746811 Functional Gain - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104719391 chr7:104719391 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102444 0 0 1 0 2 Cytosol 0 0.438685235259635 0.642551302909852 0 hPsi_site_1404 iPseU_CNN:0.642551302909852;iRNA_PseU:0 1405 chr2 38225470 38225470 1 + G A rs111797186 38225470 - 38225450 38225490 41 GCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGC GCTATGTTGCCCAGGCTGGTTTCAAACTCCTGGCCTCAAGC Direct Gain 0 0.974672772537525 0 0.25477460026741 prediction 0.949345545075051 Functional Gain - RMDN2-AS1 ENSG00000235848 ncRNA_intronic Human antisense chr2:38225470 chr2:38225470 . . 0 21 hPsi_associated_SNPs_102445 0 0 0 0 0 unknown 0 0.43871926882659 0 0 hPsi_site_1405 iPseU_CNN:0;iRNA_PseU:0 1406 chr17 20135698 20135698 1 + C T COAD 20135698 + 20135678 20135718 41 CAGGGCCACGGCAGGGTGGTCACCAGCAGAGCCGCCCCTCC CAGGGCCACGGCAGGGTGGTTACCAGCAGAGCCGCCCCTCC Direct Gain 0 0.974620762707124 0 0.998810768127441 prediction 0.949241525414248 Functional Gain - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135698 chr17:20135698 synonymous SNV . 0 21 hPsi_associated_SNPs_102446 0 0 1 0 2 Cytosol 0 0.438814636749496 0.997621536254882 0 hPsi_site_1406 iPseU_CNN:0.997621536254882;iRNA_PseU:0 1407 chr19 36551791 36551791 1 + G A rs564245431 36551791 - 36551771 36551811 41 AAACCCAAATCATGTTAAGTCTTTCTCTTAGAAAATAGCCA AAACCCAAATCATGTTAAGTTTTTCTCTTAGAAAATAGCCA Direct Gain 0 0.974585907328566 0 0.986584186553955 prediction 0.949171814657132 Functional Gain - WDR62 ENSG00000075702 intronic Human protein_coding chr19:36551791 chr19:36551791 . . 0 21 hPsi_associated_SNPs_102447 0 0 0 0 0 Nucleus 0 0.438714540475617 0.97316837310791 0 hPsi_site_1407 iPseU_CNN:0.97316837310791;iRNA_PseU:0 1408 chr19 22272020 22272020 1 + G A rs190426879 22272020 - 22272000 22272040 41 AAAGGCTTTGCCACATTCTTCACATTTGTAGGGCTTCTCCC AAAGGCTTTGCCACATTCTTTACATTTGTAGGGCTTCTCCC Direct Gain 0 0.974533201112168 0 0.99904203414917 prediction 0.949066402224336 Functional Gain - ZNF257 ENSG00000197134 CDS Human protein_coding chr19:22272020 chr19:22272020 nonsynonymous SNV 0.072 0 21 hPsi_associated_SNPs_102448 0 0 0 0 0 chromatin 0 0.438714827087932 0.99808406829834 0 hPsi_site_1408 iPseU_CNN:0.99808406829834;iRNA_PseU:0 1409 chr2 27800226 27800226 1 + G A SKCM 27800226 - 27800206 27800246 41 GAGTTCCGGAGTAATCCCTTCATATTCCACAGTTTGCTGCA GAGTTCCGGAGTAATCCCTTTATATTCCACAGTTTGCTGCA Direct Gain 0 0.974521993907627 0 0.985093772411346 prediction 0.949043987815254 Functional Gain - C2orf16 ENSG00000221843 CDS Human protein_coding chr2:27800226 chr2:27800226 nonsynonymous SNV 0.004 1 21 hPsi_associated_SNPs_102449 0 0 0 0 0 chromatin 0 0.438732045239605 0.970187544822692 0 hPsi_site_1409 iPseU_CNN:0.970187544822692;iRNA_PseU:0 1410 chr2 109399172 109399172 1 + G A COAD 109399172 - 109399152 109399192 41 AGTTATCCGCCCTAGAGGTTCACCGTCCGCACAAACATCAA AGTTATCCGCCCTAGAGGTTTACCGTCCGCACAAACATCAA Direct Gain 0 0.974514530250451 0 0.0201434791088104 prediction 0.949029060500902 Functional Gain - RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109399172 chr2:109399172 nonsynonymous SNV 0.911 2 21 hPsi_associated_SNPs_102450 0 0 0 0 0 Nucleus 0 0.438718368810134 0 0 hPsi_site_1410 iPseU_CNN:0;iRNA_PseU:0 1411 chr12 109536333 109536333 1 + A T SKCM 109536333 + 109536313 109536353 41 AGTTGGACCGGATCCAGAGGAACAAGGCCGCGGCCCTGCTC AGTTGGACCGGATCCAGAGGTACAAGGCCGCGGCCCTGCTC Direct Gain 0 0.974513528883067 0 0.999289393424988 prediction 0.949027057766133 Functional Gain - UNG ENSG00000076248 CDS Human protein_coding chr12:109536333 chr12:109536333 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102451 0 0 1 0 1 Ribosome 0 0.438718593056022 0.998578786849976 0 hPsi_site_1411 iPseU_CNN:0.998578786849976;iRNA_PseU:0 1412 chr2 73651716 73651716 1 + C T SKCM 73651716 + 73651696 73651736 41 AGGCAGCACAGCTGTTGGGTCTCAGTGCCCTTTTTTACCTT AGGCAGCACAGCTGTTGGGTTTCAGTGCCCTTTTTTACCTT Direct Gain 0 0.97448911365329 0 0.00259524583816528 prediction 0.948978227306581 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73651716 chr2:73651716 nonsynonymous SNV 0.390 1 21 hPsi_associated_SNPs_102452 0 0 0 0 0 Nucleus 0 0.438718592132201 0 0 hPsi_site_1412 iPseU_CNN:0;iRNA_PseU:0 1413 chr2 29245074 29245074 1 + G A COAD 29245074 - 29245054 29245094 41 TCTAAGATCCATCTCCTCCTCTTCTTCCCATTCAGGAGACC TCTAAGATCCATCTCCTCCTTTTCTTCCCATTCAGGAGACC Direct Gain 0 0.974470640761938 0 0.998884081840515 prediction 0.948941281523875 Functional Gain - TOGARAM2 ENSG00000189350 CDS Human protein_coding chr2:29245074 chr2:29245074 nonsynonymous SNV 0.831 2 21 hPsi_associated_SNPs_102453 0 0 0 0 0 unknown 0 0.438718592997645 0.99776816368103 0 hPsi_site_1413 iPseU_CNN:0.99776816368103;iRNA_PseU:0 1414 chrX 152818574 152818574 1 + C A LUAD 152818574 - 152818554 152818594 41 CCATCGCAAGCCATCGGCTCGATGATCTTCCTCACCATGTC CCATCGCAAGCCATCGGCTCTATGATCTTCCTCACCATGTC Direct Gain 0 0.97446027813496 0 0.0393012166023254 prediction 0.948920556269919 Functional Gain - ATP2B3 ENSG00000067842 CDS Human protein_coding chrX:152818574 chrX:152818574 synonymous SNV . 0 21 hPsi_associated_SNPs_102454 0 0 0 0 0 exosome 0 0.438716662279629 0 0 hPsi_site_1414 iPseU_CNN:0;iRNA_PseU:0 1415 chr11 63058004 63058004 1 + G A LUAD 63058004 - 63057984 63058024 41 CGAAGGGAAGTAGCTTTGATCATATACCCAGCCATCCACAC CGAAGGGAAGTAGCTTTGATTATATACCCAGCCATCCACAC Direct Gain 0 0.974435255662752 0 0.999813139438629 prediction 0.948870511325504 Functional Gain - SLC22A10 ENSG00000184999 CDS Human protein_coding chr11:63058004 chr11:63058004 nonsynonymous SNV 0.764 2 21 hPsi_associated_SNPs_102455 0 0 0 0 0 exosome 0 0.438718573900774 0.999626278877258 0 hPsi_site_1415 iPseU_CNN:0.999626278877258;iRNA_PseU:0 1416 chrX 140969315 140969315 1 + C T COAD 140969315 + 140969295 140969335 41 GCAGAGATGCAGATGAATGTCATCAACACATACACGGGCTA GCAGAGATGCAGATGAATGTTATCAACACATACACGGGCTA Direct Gain 0 0.974381973922947 0 0.999992847442627 prediction 0.948763947845895 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140969315 chrX:140969315 synonymous SNV . 0 21 hPsi_associated_SNPs_102456 0 0 0 0 0 exosome 0 0.432690349232666 0.999985694885254 0 hPsi_site_1416 iPseU_CNN:0.999985694885254;iRNA_PseU:0 1417 chr17 36872299 36872299 1 + C T rs546141378 36872299 + 36872279 36872319 41 AGGGGCCACCCCACCAACCTCATAACAGTATTCCTTATCCC AGGGGCCACCCCACCAACCTTATAACAGTATTCCTTATCCC Direct Gain 0 0.974381626854159 0 0.363847136497498 prediction 0.948763253708318 Functional Gain - MLLT6 ENSG00000263975 ncRNA_intronic Human other chr17:36872299 chr17:36872299 . . 0 21 hPsi_associated_SNPs_102457 0 0 1 3 0 chromatin 0 0.438729656026252 0 0 hPsi_site_1417 iPseU_CNN:0;iRNA_PseU:0 1418 chr6 132054838 132054838 1 + C A UCEC 132054838 - 132054818 132054858 41 GGATAGAGGAAGCCGTGGGTGATATTCTTGTCTGCTAAATA GGATAGAGGAAGCCGTGGGTTATATTCTTGTCTGCTAAATA Direct Gain 0 0.974381360685174 0 0.999995291233063 prediction 0.948762721370348 Functional Gain - ENPP3 ENSG00000154269 CDS Human protein_coding chr6:132054838 chr6:132054838 synonymous SNV . 0 21 hPsi_associated_SNPs_102458 0 0 0 0 0 Endoplasmic reticulum 0 0.438718574825953 0.999990582466126 0 hPsi_site_1418 iPseU_CNN:0.999990582466126;iRNA_PseU:0 1419 chr16 30531205 30531205 1 + G A BLCA 30531205 - 30531185 30531225 41 GAGGTAGAGCATCTGCTTCTCATACACCACGTCAACCTTCA GAGGTAGAGCATCTGCTTCTTATACACCACGTCAACCTTCA Direct Gain 0 0.974380889812783 0 0.990912616252899 prediction 0.948761779625567 Functional Gain - ITGAL ENSG00000005844 CDS Human protein_coding chr16:30531205 chr16:30531205 nonsynonymous SNV 0.045 3 21 hPsi_associated_SNPs_102459 0 0 0 0 0 Cytosol 0 0.438718593272022 0.981825232505798 0 hPsi_site_1419 iPseU_CNN:0.981825232505798;iRNA_PseU:0 1420 chr3 9982650 9982650 1 + G A KIRC 9982650 - 9982630 9982670 41 GTAGCCAAGGCCACACTGGCCACAGGCCTCACCCCCGTAGC GTAGCCAAGGCCACACTGGCTACAGGCCTCACCCCCGTAGC Direct Gain 0 0.974369778478241 0 0.992033898830414 prediction 0.948739556956482 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9982650 chr3:9982650 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102460 0 0 0 0 0 chromatin 0 0.438718576453678 0.984067797660828 0 hPsi_site_1420 iPseU_CNN:0.984067797660828;iRNA_PseU:0 1421 chr20 42208623 42208623 1 + G A rs35941643 42208623 - 42208603 42208643 41 GGGCTGAAGAATACATGGTTCTTAATCTCAAGCTGCAGGAA GGGCTGAAGAATACATGGTTTTTAATCTCAAGCTGCAGGAA Direct Gain 0 0.974365072850753 0 0.969814896583557 prediction 0.948730145701507 Functional Gain - SGK2 ENSG00000101049 CDS Human protein_coding chr20:42208623 chr20:42208623 synonymous SNV . 0 21 hPsi_associated_SNPs_102461 0 0 0 0 0 Endoplasmic reticulum 0 0.438719324416482 0.939629793167114 0 hPsi_site_1421 iPseU_CNN:0.939629793167114;iRNA_PseU:0 1422 chr8 146071913 146071913 1 + G A rs1735404 146071913 - 146071893 146071933 41 GTGGCTGGAGGGCATGAAGTCATTTTCCAAGTTCAAGGTGA GTGGCTGGAGGGCATGAAGTTATTTTCCAAGTTCAAGGTGA Direct Gain 0 0.974342496404982 0 0.999926924705505 prediction 0.948684992809963 Functional Gain - ZNF7 ENSG00000147789 UTR3 Human protein_coding chr8:146071913 chr8:146071913 . . 0 21 hPsi_associated_SNPs_102462 0 0 1 0 0 chromatin 0 0.4387398855702 0.99985384941101 0 hPsi_site_1422 iPseU_CNN:0.99985384941101;iRNA_PseU:0 1423 chr7 4798970 4798970 1 + C T SKCM 4798970 + 4798950 4798990 41 GTCAGCGCCCAGCCAGTGATCATGGCCGTGCCTCCCCGACC GTCAGCGCCCAGCCAGTGATTATGGCCGTGCCTCCCCGACC Direct Gain 0 0.974342346502231 0 0.999947428703308 prediction 0.948684693004461 Functional Gain - FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4798970 chr7:4798970 synonymous SNV . 0 21 hPsi_associated_SNPs_102463 0 0 1 0 1 Endoplasmic reticulum 0 0.43871859790339 0.999894857406616 0 hPsi_site_1423 iPseU_CNN:0.999894857406616;iRNA_PseU:0 1424 chr1 76877768 76877768 1 + G A SKCM 76877768 - 76877748 76877788 41 GCAGGAGGATCGATCTATCTCATTTCCCACCTTCTGGCCAA GCAGGAGGATCGATCTATCTTATTTCCCACCTTCTGGCCAA Direct Gain 0 0.974323297168389 0 0.0634678304195404 prediction 0.948646594336777 Functional Gain - ST6GALNAC3 ENSG00000184005 CDS Human protein_coding chr1:76877768 chr1:76877768 nonsynonymous SNV 0.870 2 21 hPsi_associated_SNPs_102464 0 0 0 0 0 nucleus 0 0.438718606164487 0 0 hPsi_site_1424 iPseU_CNN:0;iRNA_PseU:0 1425 chr3 136573387 136573387 1 + C T LUAD 136573387 + 136573367 136573407 41 TGATGGTGAAATATACTTCTCATTATCCCCAGCCTGGCGAT TGATGGTGAAATATACTTCTTATTATCCCCAGCCTGGCGAT Direct Gain 0 0.974318872815893 0 0.504789412021637 prediction 0.948637745631786 Functional Gain - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136573387 chr3:136573387 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102465 0 0 1 0 0 nucleolus 0 0.438718592897988 0.00957882404327393 0 hPsi_site_1425 iPseU_CNN:0.00957882404327393;iRNA_PseU:0 1426 chr17 28383119 28383119 1 + C T SKCM 28383119 + 28383099 28383139 41 AACTGGAAAATGAAGTATGTCACATTTGAAGATGAGGAACA AACTGGAAAATGAAGTATGTTACATTTGAAGATGAGGAACA Direct Gain 0 0.974298964361606 0 0.999374270439148 prediction 0.948597928723211 Functional Gain - EFCAB5 ENSG00000176927 CDS Human protein_coding chr17:28383119 chr17:28383119 synonymous SNV . 0 21 hPsi_associated_SNPs_102466 0 0 0 0 1 exosome 0 0.438715048668003 0.998748540878296 0 hPsi_site_1426 iPseU_CNN:0.998748540878296;iRNA_PseU:0 1427 chr19 18779689 18779689 1 + G A SKCM 18779689 - 18779669 18779709 41 TGTAGCACGCGGGGTTCGCTCATGGGCGCCTTGAACTCCCA TGTAGCACGCGGGGTTCGCTTATGGGCGCCTTGAACTCCCA Direct Gain 0 0.974274543006998 0 0.999997973442078 prediction 0.948549086013996 Functional Gain - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18779689 chr19:18779689 nonsynonymous SNV 0.984 4 21 hPsi_associated_SNPs_102467 0 0 0 0 0 chromatin 0 0.438718593325525 0.999995946884156 0 hPsi_site_1427 iPseU_CNN:0.999995946884156;iRNA_PseU:0 1428 chr3 99865843 99865843 1 + G A CESC 99865843 - 99865823 99865863 41 CTGCTGCATCACTTCTGTGTCTCCTTCTCCTTCACCATCTG CTGCTGCATCACTTCTGTGTTTCCTTCTCCTTCACCATCTG Direct Gain 0 0.974251732080287 0 0.999808669090271 prediction 0.948503464160575 Functional Gain - CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99865843 chr3:99865843 nonsynonymous SNV 0.678 1 21 hPsi_associated_SNPs_102468 0 0 0 0 0 Ribosome 0 0.438711556832927 0.999617338180542 0 hPsi_site_1428 iPseU_CNN:0.999617338180542;iRNA_PseU:0 1429 chr19 41763524 41763524 1 + C A UCEC 41763524 - 41763504 41763544 41 GGGTCCTCACAGTCCATCCAGACAGTCCGCAGGCTGCTTCA GGGTCCTCACAGTCCATCCATACAGTCCGCAGGCTGCTTCA Direct Gain 0 0.974238623698414 0 0.0186679065227509 prediction 0.948477247396827 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41763524 chr19:41763524 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102469 0 0 0 0 0 Nucleus 0 0.438783343228164 0 0 hPsi_site_1429 iPseU_CNN:0;iRNA_PseU:0 1430 chr15 66797605 66797605 1 + G A rs115276175 66797605 - 66797585 66797625 41 GGACCGGCGACGTCAGGGGTCATGGCCCCGCCCCGCCGGGA GGACCGGCGACGTCAGGGGTTATGGCCCCGCCCCGCCGGGA Direct Gain 0 0.97422307902862 0 0.999239861965179 prediction 0.948446158057241 Functional Gain - ZWILCH ENSG00000174442 UTR5 Human protein_coding chr15:66797605 chr15:66797605 . . 0 21 hPsi_associated_SNPs_102470 0 0 0 0 0 Ribosome 0 0.438408129804501 0.998479723930358 0 hPsi_site_1430 iPseU_CNN:0.998479723930358;iRNA_PseU:0 1431 chr10 121658071 121658071 1 + C T UCEC 121658071 + 121658051 121658091 41 TTTTGGGAATATTGGACAGTCACCATTAACAACTGCAGCAA TTTTGGGAATATTGGACAGTTACCATTAACAACTGCAGCAA Direct Gain 0 0.974218405374422 0 0.565846621990204 prediction 0.948436810748844 Functional Gain - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121658071 chr10:121658071 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_102471 0 0 1 0 0 Nucleus 0 0.438959827113113 0.131693243980408 0 hPsi_site_1431 iPseU_CNN:0.131693243980408;iRNA_PseU:0 1432 chr11 5444012 5444012 1 + C A LUAD 5444012 - 5443992 5444032 41 CCATACCAGCTGTTGAGCCTGATGTCAGCACAGACCAGGCG CCATACCAGCTGTTGAGCCTTATGTCAGCACAGACCAGGCG Direct Gain 0 0.97419636680964 0 0.13770380616188 prediction 0.948392733619279 Functional Gain - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5444012 chr11:5444012 synonymous SNV . 0 21 hPsi_associated_SNPs_102472 0 0 1 0 0 chromatin 0 0.420557426209112 0 0 hPsi_site_1432 iPseU_CNN:0;iRNA_PseU:0 1433 chr9 131107500 131107500 1 + G A UCEC 131107500 - 131107480 131107520 41 GTAGAGGCAAACAAAATGGGCACTGTCCGCCGCTCCTGCAG GTAGAGGCAAACAAAATGGGTACTGTCCGCCGCTCCTGCAG Direct Gain 0 0.974186106297195 0 0.999999642372131 prediction 0.94837221259439 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131107500 chr9:131107500 synonymous SNV . 0 21 hPsi_associated_SNPs_102473 0 0 0 0 0 Ribosome 0 0.438718562958463 0.999999284744262 0 hPsi_site_1433 iPseU_CNN:0.999999284744262;iRNA_PseU:0 1434 chr5 71492630 71492630 1 + G A STAD 71492630 - 71492610 71492650 41 AGAAGGGGACTCCGTCTCTTCATTGTTGGTCTCATCACTCA AGAAGGGGACTCCGTCTCTTTATTGTTGGTCTCATCACTCA Direct Gain 0 0.974115905706089 0 0.997685074806213 prediction 0.948231811412179 Functional Gain - MAP1B ENSG00000131711 CDS Human protein_coding chr5:71492630 chr5:71492630 nonsynonymous SNV 0.973 2 21 hPsi_associated_SNPs_102474 0 0 0 0 0 Cytosol 0 0.438717607619642 0.995370149612426 0 hPsi_site_1434 iPseU_CNN:0.995370149612426;iRNA_PseU:0 1435 chr11 67223796 67223796 1 + G A STAD 67223796 - 67223776 67223816 41 GTAGCCGTCACGGTCAGTGTCAAACTCCTCGAAGGCGGCCT GTAGCCGTCACGGTCAGTGTTAAACTCCTCGAAGGCGGCCT Direct Gain 0 0.974095777335517 0 0.999999165534973 prediction 0.948191554671034 Functional Gain - CABP4 ENSG00000175544 CDS Human protein_coding chr11:67223796 chr11:67223796 nonsynonymous SNV 0.974 5 21 hPsi_associated_SNPs_102475 0 0 0 0 0 exosome 0 0.438689849679441 0.999998331069946 0 hPsi_site_1435 iPseU_CNN:0.999998331069946;iRNA_PseU:0 1436 chr1 23219532 23219532 1 + G A SKCM 23219532 - 23219512 23219552 41 GGACTCTGCTCACCTTCTGTCATGGTCTGGAAGTACATCTT GGACTCTGCTCACCTTCTGTTATGGTCTGGAAGTACATCTT Direct Gain 0 0.97407545258883 0 0.999993443489075 prediction 0.948150905177661 Functional Gain - EPHB2 ENSG00000133216 CDS Human protein_coding chr1:23219532 chr1:23219532 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102476 0 0 0 0 0 Endoplasmic reticulum 0 0.438716663388185 0.99998688697815 0 hPsi_site_1436 iPseU_CNN:0.99998688697815;iRNA_PseU:0 1437 chr11 124502031 124502031 1 + C T rs116342529 124502031 + 124502011 124502051 41 TCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATGTACC TCAGCCTGCAGCCTTTGTGTTTTCTTACCAGCCCATGTACC Direct Gain 0 0.97406112408527 0 0.957208871841431 prediction 0.94812224817054 Functional Gain - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124502031 chr11:124502031 nonsynonymous SNV 0.727 4 21 hPsi_associated_SNPs_102477 0 0 1 0 1 Ribosome 0 0.438718592994953 0.914417743682862 0 hPsi_site_1437 iPseU_CNN:0.914417743682862;iRNA_PseU:0 1438 chr1 176759108 176759108 1 + G A SKCM 176759108 - 176759088 176759128 41 AAAAATGTTCCTTACCTTTTCACGTTCCTGGTTACAGTTGA AAAAATGTTCCTTACCTTTTTACGTTCCTGGTTACAGTTGA Direct Gain 0 0.974022729265941 0 0.999116599559784 prediction 0.948045458531883 Functional Gain - PAPPA2 ENSG00000116183 CDS Human protein_coding chr1:176759108 chr1:176759108 nonsynonymous SNV 0.882 0 21 hPsi_associated_SNPs_102478 0 0 0 0 0 Cytosol 0 0.438718592333447 0.998233199119568 0 hPsi_site_1438 iPseU_CNN:0.998233199119568;iRNA_PseU:0 1439 chr4 8467189 8467189 1 + G A LUSC 8467189 - 8467169 8467209 41 AGGTATTCCCGGTACTGAGTCTTCTTACTCTGCCTCCGGGA AGGTATTCCCGGTACTGAGTTTTCTTACTCTGCCTCCGGGA Direct Gain 0 0.974020162159585 0 0.981745958328247 prediction 0.94804032431917 Functional Gain - TRMT44 ENSG00000155275 CDS Human protein_coding chr4:8467189 chr4:8467189 synonymous SNV . 0 21 hPsi_associated_SNPs_102479 0 0 0 0 0 Cytosol 0 0.438718592995138 0.963491916656494 0 hPsi_site_1439 iPseU_CNN:0.963491916656494;iRNA_PseU:0 1440 chr9 32784298 32784298 1 + C T LGG 32784298 + 32784278 32784318 41 AAAGGGGAGACTTTGGGAAACATCCCCCTCCTGGCCATCGG AAAGGGGAGACTTTGGGAAATATCCCCCTCCTGGCCATCGG Direct Gain 0 0.97399358106834 0 0.725180149078369 prediction 0.94798716213668 Functional Gain - TMEM215 ENSG00000188133 CDS Human protein_coding chr9:32784298 chr9:32784298 synonymous SNV . 0 21 hPsi_associated_SNPs_102480 0 0 0 0 0 exosome 0 0.438718589595721 0.450360298156738 0 hPsi_site_1440 iPseU_CNN:0.450360298156738;iRNA_PseU:0 1441 chr12 31237918 31237918 1 + G A CESC 31237918 - 31237898 31237938 41 GCGGAGGAGATTCTCTCTTTCTTCTTCTTCCTGCCTCTGGA GCGGAGGAGATTCTCTCTTTTTTCTTCTTCCTGCCTCTGGA Direct Gain 0 0.973965193228318 0 0.996806859970093 prediction 0.947930386456635 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31237918 chr12:31237918 nonsynonymous SNV 0.221 3 21 hPsi_associated_SNPs_102481 0 0 0 0 0 Cytosol 0 0.438718592984317 0.993613719940186 0 hPsi_site_1441 iPseU_CNN:0.993613719940186;iRNA_PseU:0 1442 chr16 4924401 4924401 1 + G A BLCA 4924401 - 4924381 4924421 41 GGCTGGATTGCGGATCAAGTCTTCATCCAATGAGTCCTCCA GGCTGGATTGCGGATCAAGTTTTCATCCAATGAGTCCTCCA Direct Gain 0 0.973910934509458 0 0.983899235725403 prediction 0.947821869018915 Functional Gain - UBN1 ENSG00000118900 CDS Human protein_coding chr16:4924401 chr16:4924401 nonsynonymous SNV 0.567 4 21 hPsi_associated_SNPs_102482 0 0 0 0 0 Ribosome 0 0.438902978748126 0.967798471450806 0 hPsi_site_1442 iPseU_CNN:0.967798471450806;iRNA_PseU:0 1443 chr3 41275704 41275704 1 + T A UCEC 41275704 - 41275684 41275724 41 AGCAACTGAACTAGTCGTGGAATGGCACCCTGCTCACGCAA AGCAACTGAACTAGTCGTGGTATGGCACCCTGCTCACGCAA Direct Gain 0 0.973905562393937 0 0.999989867210388 prediction 0.947811124787874 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275704 chr3:41275704 synonymous SNV . 0 21 hPsi_associated_SNPs_102483 0 0 0 0 0 Nucleus 0 0.438677719480539 0.999979734420776 0 hPsi_site_1443 iPseU_CNN:0.999979734420776;iRNA_PseU:0 1444 chr2 206165361 206165361 1 + C T UCEC 206165361 + 206165341 206165381 41 GGAAGAATGACCTTCCCTTTCACAGGCCCCGGCCGCACATG GGAAGAATGACCTTCCCTTTTACAGGCCCCGGCCGCACATG Direct Gain 0 0.973881453673485 0 0.873692750930786 prediction 0.947762907346969 Functional Gain - PARD3B ENSG00000116117 CDS Human protein_coding chr2:206165361 chr2:206165361 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_102484 0 0 0 0 1 Nucleus 0 0.438718993076431 0.747385501861572 0 hPsi_site_1444 iPseU_CNN:0.747385501861572;iRNA_PseU:0 1445 chr1 227844895 227844895 1 + T A rs1951729 227844895 - 227844875 227844915 41 GTTTGTTTGTTTTTGTTTTTAACAACCAGCTTTCACATGAA GTTTGTTTGTTTTTGTTTTTTACAACCAGCTTTCACATGAA Direct Gain 0 0.973871257061767 0 0.5465989112854 prediction 0.947742514123535 Functional Gain - ZNF678 ENSG00000181450 UTR3 Human protein_coding chr1:227844895 chr1:227844895 . . 0 21 hPsi_associated_SNPs_102485 0 0 0 0 0 chromatin 0 0.438561178079449 0.0931978225707999 0 hPsi_site_1445 iPseU_CNN:0.0931978225707999;iRNA_PseU:0 1446 chrX 140984681 140984681 1 + G A LGG 140984681 - 140984661 140984701 41 GGTGGCATCCCAGCAGCAGGCATATCCTCATCTTCTGGAAC GGTGGCATCCCAGCAGCAGGTATATCCTCATCTTCTGGAAC Direct Gain 0 0.973867641654568 0 0.988827705383301 prediction 0.947735283309135 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140984681 chrX:140984681 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102486 0 0 0 0 0 exosome 0 0.438849615099395 0.977655410766602 0 hPsi_site_1446 iPseU_CNN:0.977655410766602;iRNA_PseU:0 1447 chr20 48507388 48507388 1 + G A rs2235619 48507388 - 48507368 48507408 41 TCAGGCCTACCCCTTGGCCTCATGCCAGCCAGCCCAGCCCA TCAGGCCTACCCCTTGGCCTTATGCCAGCCAGCCCAGCCCA Direct Gain 0 0.973858918340967 0 0.993349730968475 prediction 0.947717836681934 Functional Gain - SLC9A8 ENSG00000197818 UTR3 Human protein_coding chr20:48507388 chr20:48507388 . . 0 21 hPsi_associated_SNPs_102487 0 0 0 0 0 Nucleus 0 0.438714841836804 0.98669946193695 0 hPsi_site_1447 iPseU_CNN:0.98669946193695;iRNA_PseU:0 1448 chrX 55033742 55033742 1 + G T LGG 55033742 + 55033722 55033762 41 GGCCACAGGGAGCCATGTGTGATGCGTACTGTGAAGAAGCC GGCCACAGGGAGCCATGTGTTATGCGTACTGTGAAGAAGCC Direct Gain 0 0.973856262122316 0 0.949403166770935 prediction 0.947712524244632 Functional Gain - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033742 chrX:55033742 synonymous SNV . 0 21 hPsi_associated_SNPs_102488 0 0 1 0 0 Ribosome 0 0.441216422343248 0.89880633354187 0 hPsi_site_1448 iPseU_CNN:0.89880633354187;iRNA_PseU:0 1449 chr20 51872865 51872865 1 + G A SKCM 51872865 - 51872845 51872885 41 TGGTCCACTGACAAGCGGGTCATGTCCTTCATTTGGAAACC TGGTCCACTGACAAGCGGGTTATGTCCTTCATTTGGAAACC Direct Gain 0 0.973842505286107 0 0.997663378715515 prediction 0.947685010572215 Functional Gain - TSHZ2 ENSG00000182463 CDS Human protein_coding chr20:51872865 chr20:51872865 nonsynonymous SNV 0.983 4 21 hPsi_associated_SNPs_102489 0 0 0 0 0 Cytoplasm 0 0.438718302970179 0.99532675743103 0 hPsi_site_1449 iPseU_CNN:0.99532675743103;iRNA_PseU:0 1450 chr4 77661031 77661031 1 + G A UCEC 77661031 - 77661011 77661051 41 GAGATGTCTCTTCAGGGAGGCATCCTCCTCATTTTCAGGCA GAGATGTCTCTTCAGGGAGGTATCCTCCTCATTTTCAGGCA Direct Gain 0 0.973832089492733 0 0.999441683292389 prediction 0.947664178985466 Functional Gain - SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661031 chr4:77661031 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_102490 0 0 0 0 0 Ribosome 0 0.438719641711681 0.998883366584778 0 hPsi_site_1450 iPseU_CNN:0.998883366584778;iRNA_PseU:0 1451 chr16 87437586 87437586 1 + C T rs367609310 87437586 + 87437566 87437606 41 TGAAAACATTAACATTCAGACACACTCCCTTCTGCCTTCCG TGAAAACATTAACATTCAGATACACTCCCTTCTGCCTTCCG Direct Gain 0 0.973823308136275 0 0.999999284744263 prediction 0.947646616272551 Functional Gain - MAP1LC3B ENSG00000140941 UTR3 Human protein_coding chr16:87437586 chr16:87437586 . . 0 21 hPsi_associated_SNPs_102491 0 0 1 1 0 Ribosome 0 0.439595938843258 0.999998569488526 0 hPsi_site_1451 iPseU_CNN:0.999998569488526;iRNA_PseU:0 1452 chr1 168260434 168260434 1 + G T LUSC 168260434 + 168260414 168260454 41 CTAAAGATTAGTGTCACAGGGTTGGACCCCAATGCCATGTA CTAAAGATTAGTGTCACAGGTTTGGACCCCAATGCCATGTA Direct Gain 0 0.973815801521977 0 0.937978744506836 prediction 0.947631603043954 Functional Gain - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168260434 chr1:168260434 synonymous SNV . 0 21 hPsi_associated_SNPs_102492 0 0 1 0 1 cytosol 0 0.438719086840235 0.875957489013672 0 hPsi_site_1452 iPseU_CNN:0.875957489013672;iRNA_PseU:0 1453 chr20 61386057 61386057 1 + C T SKCM 61386057 + 61386037 61386077 41 GTCAACACCTTCATGTCCTTCATATTCCCCATGGTGGTCAT GTCAACACCTTCATGTCCTTTATATTCCCCATGGTGGTCAT Direct Gain 0 0.973789618918497 0 1 prediction 0.947579237836993 Functional Gain - NTSR1 ENSG00000101188 CDS Human protein_coding chr20:61386057 chr20:61386057 synonymous SNV . 0 21 hPsi_associated_SNPs_102493 0 0 1 0 1 exosome 0 0.439012896442913 1 0 hPsi_site_1453 iPseU_CNN:1;iRNA_PseU:0 1454 chr9 132484547 132484547 1 + C T LUAD 132484547 + 132484527 132484567 41 GGCCCCGCAACCCCAGGGGTCAACATGGCCAACAGCATCGC GGCCCCGCAACCCCAGGGGTTAACATGGCCAACAGCATCGC Direct Gain 0 0.973695662791094 0 0.997968196868896 prediction 0.947391325582188 Functional Gain - PRRX2 ENSG00000167157 CDS Human protein_coding chr9:132484547 chr9:132484547 synonymous SNV . 0 21 hPsi_associated_SNPs_102494 0 0 0 0 1 chromatin 0 0.438718605522552 0.995936393737792 0 hPsi_site_1454 iPseU_CNN:0.995936393737792;iRNA_PseU:0 1455 chr3 179322615 179322615 1 + G A STAD 179322615 - 179322595 179322635 41 GAAACCCGCCGCAACAAACTCATGGCCGCCATGGCTACTAC GAAACCCGCCGCAACAAACTTATGGCCGCCATGGCTACTAC Direct Gain 0 0.973685156923344 0 0.921263754367828 prediction 0.947370313846689 Functional Gain - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179322615 chr3:179322615 nonsynonymous SNV 0.702 4 21 hPsi_associated_SNPs_102495 0 0 0 0 0 Ribosome 0 0.438718513380397 0.842527508735656 0 hPsi_site_1455 iPseU_CNN:0.842527508735656;iRNA_PseU:0 1456 chr19 16772124 16772124 1 + C T LUSC 16772124 + 16772104 16772144 41 GACCTCAGTTACTTCATCGTCTCCATCCTCTACCTCAAGTA GACCTCAGTTACTTCATCGTTTCCATCCTCTACCTCAAGTA Direct Gain 0 0.973655419076164 0 0.942583024501801 prediction 0.947310838152329 Functional Gain - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16772124 chr19:16772124 synonymous SNV . 0 21 hPsi_associated_SNPs_102496 0 0 1 0 1 Ribosome 0 0.438718642420799 0.885166049003602 0 hPsi_site_1456 iPseU_CNN:0.885166049003602;iRNA_PseU:0 1457 chr17 48676861 48676861 1 + A T COAD 48676861 + 48676841 48676881 41 CCAGCAGGCGCTCCAGCCGGAACAGCCTCGGCCGTGCACCC CCAGCAGGCGCTCCAGCCGGTACAGCCTCGGCCGTGCACCC Direct Gain 0 0.973637881647813 0 0.992398619651794 prediction 0.947275763295625 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48676861 chr17:48676861 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_102497 0 0 0 0 0 exosome 0 0.43871859492949 0.984797239303588 0 hPsi_site_1457 iPseU_CNN:0.984797239303588;iRNA_PseU:0 1458 chr11 101869055 101869055 1 + G A rs374654495 101869055 - 101869035 101869075 41 CAAAGTGCTGGGATTACAGGCATAAGCCAACGGCCCTGGCT CAAAGTGCTGGGATTACAGGTATAAGCCAACGGCCCTGGCT Direct Gain 0 0.973625029693144 0 0.999903321266174 prediction 0.947250059386289 Functional Gain - CEP126 ENSG00000110318 UTR3 Human protein_coding chr11:101869055 chr11:101869055 . . 0 21 hPsi_associated_SNPs_102498 0 0 0 0 0 exosome 0 0.438717803353127 0.999806642532348 0 hPsi_site_1458 iPseU_CNN:0.999806642532348;iRNA_PseU:0 1459 chr6 163510401 163510401 1 + C T LGG 163510401 + 163510381 163510421 41 CCTTGGTGCCTTATTACCGTCAAATCCTCCCTGTCCTGAAC CCTTGGTGCCTTATTACCGTTAAATCCTCCCTGTCCTGAAC Direct Gain 0 0.973623710767085 0 0.880857706069946 prediction 0.947247421534171 Functional Gain - PACRG ENSG00000112530 CDS Human protein_coding chr6:163510401 chr6:163510401 stopgain 1.000 1 21 hPsi_associated_SNPs_102499 0 0 0 0 1 Nucleus 0 0.438718592993661 0.761715412139892 0 hPsi_site_1459 iPseU_CNN:0.761715412139892;iRNA_PseU:0 1460 chr11 66555707 66555707 1 + G A LUSC 66555707 - 66555687 66555727 41 TGGAAGGGTGTTACCCCTGTCATATCCTGAGAATAGCTGCC TGGAAGGGTGTTACCCCTGTTATATCCTGAGAATAGCTGCC Direct Gain 0 0.973615852962105 0 0.997849106788635 prediction 0.947231705924209 Functional Gain - C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66555707 chr11:66555707 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102500 0 0 0 0 0 Endoplasmic reticulum 0 0.438734155678328 0.99569821357727 0 hPsi_site_1460 iPseU_CNN:0.99569821357727;iRNA_PseU:0 1461 chr19 58051861 58051861 1 + C T rs112161597 58051861 + 58051841 58051881 41 GTATAGGCTGGGTGCGGTGGCTCATGCCTGTAATCCCAGCA GTATAGGCTGGGTGCGGTGGTTCATGCCTGTAATCCCAGCA Direct Gain 0 0.973597713361051 0 0.999313771724701 prediction 0.947195426722103 Functional Gain - ZNF549 ENSG00000121406 UTR3 Human protein_coding chr19:58051861 chr19:58051861 . . 0 21 hPsi_associated_SNPs_102501 0 0 0 0 0 exosome 0 0.437161419013564 0.998627543449402 0 hPsi_site_1461 iPseU_CNN:0.998627543449402;iRNA_PseU:0 1462 chr11 33308854 33308854 1 + G T UCEC 33308854 + 33308834 33308874 41 AGTCCCCTGCCACTAAAAGTGATTCGGCCCATTCTTCAACA AGTCCCCTGCCACTAAAAGTTATTCGGCCCATTCTTCAACA Direct Gain 0 0.973570135659559 0 0.999953627586365 prediction 0.947140271319117 Functional Gain - HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33308854 chr11:33308854 synonymous SNV . 0 21 hPsi_associated_SNPs_102502 0 0 1 0 0 Cytosol 0 0.438718592995102 0.99990725517273 0 hPsi_site_1462 iPseU_CNN:0.99990725517273;iRNA_PseU:0 1463 chr20 62187706 62187706 1 + C T LUAD 62187706 + 62187686 62187726 41 GCCCGGCTGCGCTGGTTCGTCACCATCCAGCCAGCCACATC GCCCGGCTGCGCTGGTTCGTTACCATCCAGCCAGCCACATC Direct Gain 0 0.973552406559271 0 1 prediction 0.947104813118542 Functional Gain - FNDC11 ENSG00000125531 CDS Human protein_coding chr20:62187706 chr20:62187706 synonymous SNV . 0 21 hPsi_associated_SNPs_102503 0 0 0 0 0 exosome 0 0.390941321810278 1 0 hPsi_site_1463 iPseU_CNN:1;iRNA_PseU:0 1464 chr16 58550743 58550743 1 + G A BLCA 58550743 - 58550723 58550763 41 GGGGGAGTTGGGCTCCTTTTCATCCTCTTCTTCCTCCAGTG GGGGGAGTTGGGCTCCTTTTTATCCTCTTCTTCCTCCAGTG Direct Gain 0 0.973539311871924 0 0.918362855911255 prediction 0.947078623743847 Functional Gain - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550743 chr16:58550743 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_102504 0 0 0 0 0 Ribosome 0 0.438718592995102 0.83672571182251 0 hPsi_site_1464 iPseU_CNN:0.83672571182251;iRNA_PseU:0 1465 chr8 195775 195775 1 + C A READ 195775 - 195755 195795 41 GAAAGCCTTCCCACATAGGAGACATCCATATGGTTTATCTC GAAAGCCTTCCCACATAGGATACATCCATATGGTTTATCTC Direct Gain 0 0.9735329901741 0 0.999943137168884 prediction 0.9470659803482 Functional Gain - ZNF596 ENSG00000172748 CDS Human protein_coding chr8:195775 chr8:195775 nonsynonymous SNV 0.220 0 21 hPsi_associated_SNPs_102505 0 0 0 0 0 cytosol 0 0.438642347621392 0.999886274337768 0 hPsi_site_1465 iPseU_CNN:0.999886274337768;iRNA_PseU:0 1466 chr4 942214 942214 1 + C A rs183333093 942214 - 942194 942234 41 TCCTCTGGCTCACTTCCAGGGTGCTGCCTTTGTCCACTGAA TCCTCTGGCTCACTTCCAGGTTGCTGCCTTTGTCCACTGAA Direct Gain 0 0.973517970530811 0 0.967873394489288 prediction 0.947035941061622 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:942214 chr4:942214 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_102506 0 0 0 0 0 chromatin 0 0.438718592953019 0.935746788978576 0 hPsi_site_1466 iPseU_CNN:0.935746788978576;iRNA_PseU:0 1467 chr12 9087791 9087791 1 + G A BLCA 9087791 - 9087771 9087811 41 AAAGGGCCACCTGACTGATTCTCAGTCAGCCCTGTCGGAAG AAAGGGCCACCTGACTGATTTTCAGTCAGCCCTGTCGGAAG Direct Gain 0 0.973517651932516 0 0.429073452949524 prediction 0.947035303865033 Functional Gain - PHC1 ENSG00000111752 CDS Human protein_coding chr12:9087791 chr12:9087791 synonymous SNV . 0 21 hPsi_associated_SNPs_102507 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592995102 0 0 hPsi_site_1467 iPseU_CNN:0;iRNA_PseU:0 1468 chr1 145303970 145303970 1 + C T SKCM 145303970 + 145303950 145303990 41 GGCTGAGAAAGTGCAGAAATCATCTGCCCCCAGGTAACACT GGCTGAGAAAGTGCAGAAATTATCTGCCCCCAGGTAACACT Direct Gain 0 0.973479782184985 0 0.657217860221863 prediction 0.946959564369971 Functional Gain - NBPF10 ENSG00000163386 CDS Human other chr1:145303970 chr1:145303970 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_102508 0 0 0 0 1 chromatin 0 0.438718433405134 0.314435720443726 0 hPsi_site_1468 iPseU_CNN:0.314435720443726;iRNA_PseU:0 1469 chr3 46541948 46541948 1 + G A SKCM 46541948 - 46541928 46541968 41 CATCTCTGGGTAAACACCCTCATCTTCACCTGGCCCCTGGA CATCTCTGGGTAAACACCCTTATCTTCACCTGGCCCCTGGA Direct Gain 0 0.97347519437907 0 0.999984443187714 prediction 0.94695038875814 Functional Gain - RTP3 ENSG00000163825 CDS Human protein_coding chr3:46541948 chr3:46541948 nonsynonymous SNV 0.989 4 21 hPsi_associated_SNPs_102509 0 0 0 0 0 exosome 0 0.438718655776516 0.999968886375428 0 hPsi_site_1469 iPseU_CNN:0.999968886375428;iRNA_PseU:0 1470 chr2 182363378 182363378 1 + G A SKCM 182363378 - 182363358 182363398 41 GGAGACTCTGCCTTTCTGTTCACATCCAAACTCATGTTATA GGAGACTCTGCCTTTCTGTTTACATCCAAACTCATGTTATA Direct Gain 0 0.973458533595924 0 0.928302764892578 prediction 0.946917067191848 Functional Gain - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182363378 chr2:182363378 synonymous SNV . 0 21 hPsi_associated_SNPs_102510 0 0 0 0 0 exosome 0 0.438565397127302 0.856605529785156 0 hPsi_site_1470 iPseU_CNN:0.856605529785156;iRNA_PseU:0 1471 chr11 77924791 77924791 1 + G A GBM 77924791 - 77924771 77924811 41 GCAGCCCCCTGGAGAGCCTTCATCCTCATCCTTGTCTTCAT GCAGCCCCCTGGAGAGCCTTTATCCTCATCCTTGTCTTCAT Direct Gain 0 0.973454371109237 0 0.999772489070892 prediction 0.946908742218475 Functional Gain - USP35 ENSG00000118369 CDS Human protein_coding chr11:77924791 chr11:77924791 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_102511 0 0 0 0 0 nucleolus 0 0.438718592995019 0.999544978141784 0 hPsi_site_1471 iPseU_CNN:0.999544978141784;iRNA_PseU:0 1472 chr14 59107564 59107564 1 + G T UCEC 59107564 + 59107544 59107584 41 ACATCTGAAGAGCACCTGGAGACAGACAGTCGGCCTAGCTC ACATCTGAAGAGCACCTGGATACAGACAGTCGGCCTAGCTC Direct Gain 0 0.973446195830394 0 0.129381000995636 prediction 0.946892391660789 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59107564 chr14:59107564 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102512 0 0 1 0 1 exosome 0 0.438718597680963 0 0 hPsi_site_1472 iPseU_CNN:0;iRNA_PseU:0 1473 chr12 176445 176445 1 + C T ESCA 176445 + 176425 176465 41 GGGGCCCTGGCAGCAGGGCTCACACACCCCAGTCGCCCCAC GGGGCCCTGGCAGCAGGGCTTACACACCCCAGTCGCCCCAC Direct Gain 0 0.973425237193246 0 0.999968290328979 prediction 0.946850474386492 Functional Gain - IQSEC3 ENSG00000120645 CDS Human protein_coding chr12:176445 chr12:176445 nonsynonymous SNV 0.155 1 21 hPsi_associated_SNPs_102513 0 0 0 0 0 nucleolus 0 0.437537711372093 0.999936580657958 0 hPsi_site_1473 iPseU_CNN:0.999936580657958;iRNA_PseU:0 1474 chr8 35647965 35647965 1 + G A HNSC 35647965 - 35647945 35647985 41 AAGGGCACAGGCCAGGGAGTCAAGATCACCATCATGCTGAT AAGGGCACAGGCCAGGGAGTTAAGATCACCATCATGCTGAT Direct Gain 0 0.9734207652377 0 0.999989867210388 prediction 0.946841530475401 Functional Gain - UNC5D ENSG00000156687 CDS Human protein_coding chr8:35647965 chr8:35647965 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102514 0 0 0 0 0 chromatin 0 0.438831017267591 0.999979734420776 0 hPsi_site_1474 iPseU_CNN:0.999979734420776;iRNA_PseU:0 1475 chr3 89390106 89390106 1 + G A SKCM 89390106 - 89390086 89390126 41 GGCGGGCACTTAGCACACTTCATATTACCATCCAATGCCTT GGCGGGCACTTAGCACACTTTATATTACCATCCAATGCCTT Direct Gain 0 0.97341661599741 0 0.999974966049194 prediction 0.946833231994821 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89390106 chr3:89390106 nonsynonymous SNV 0.373 0 21 hPsi_associated_SNPs_102515 0 0 0 0 0 Ribosome 0 0.438718593255574 0.999949932098388 0 hPsi_site_1475 iPseU_CNN:0.999949932098388;iRNA_PseU:0 1476 chr11 3681041 3681041 1 + C T rs550222266 3681041 + 3681021 3681061 41 CCAGGTGGCCAGAGTGGAGTCTCAGCCCCACCCGTCCATCC CCAGGTGGCCAGAGTGGAGTTTCAGCCCCACCCGTCCATCC Direct Gain 0 0.973414700984451 0 0.994001388549805 prediction 0.946829401968902 Functional Gain - ART1 ENSG00000129744 CDS Human protein_coding chr11:3681041 chr11:3681041 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_102516 0 0 0 0 0 exosome 0 0.438711489372607 0.98800277709961 0 hPsi_site_1476 iPseU_CNN:0.98800277709961;iRNA_PseU:0 1477 chr16 30732207 30732207 1 + C T UCEC 30732207 + 30732187 30732227 41 ATCACTGATGGTTTCAGCCTCACCTGCCGGGCCCCCGCTTA ATCACTGATGGTTTCAGCCTTACCTGCCGGGCCCCCGCTTA Direct Gain 0 0.973410214494238 0 0.999794244766235 prediction 0.946820428988477 Functional Gain - SRCAP ENSG00000080603 CDS Human protein_coding chr16:30732207 chr16:30732207 nonsynonymous SNV 0.642 3 21 hPsi_associated_SNPs_102517 0 0 1 0 0 Ribosome 0 0.438718548637842 0.99958848953247 0 hPsi_site_1477 iPseU_CNN:0.99958848953247;iRNA_PseU:0 1478 chr3 128780850 128780850 1 + G A PAAD 128780850 - 128780830 128780870 41 CAGATAGGTGAGGCTGCAGTCACAGTGCCAGGGGTTCTGCG CAGATAGGTGAGGCTGCAGTTACAGTGCCAGGGGTTCTGCG Direct Gain 0 0.973398032238218 0 0.99757319688797 prediction 0.946796064476436 Functional Gain - GP9 ENSG00000169704 CDS Human protein_coding chr3:128780850 chr3:128780850 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102518 0 0 0 0 0 Endoplasmic reticulum 0 0.43883828982562 0.99514639377594 0 hPsi_site_1478 iPseU_CNN:0.99514639377594;iRNA_PseU:0 1479 chrX 149680710 149680710 1 + G A rs182597797 149680710 - 149680690 149680730 41 TTCCCCGAAACTGCTGTGGTCACAGCTGCTGCCGCTGTGAC TTCCCCGAAACTGCTGTGGTTACAGCTGCTGCCGCTGTGAC Direct Gain 0 0.973390890519935 0 0.959649682044983 prediction 0.946781781039869 Functional Gain - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149680710 chrX:149680710 synonymous SNV . 0 21 hPsi_associated_SNPs_102519 0 0 0 0 0 Nucleus 0 0.438701403904656 0.919299364089966 0 hPsi_site_1479 iPseU_CNN:0.919299364089966;iRNA_PseU:0 1480 chr20 23016333 23016333 1 + G T rs147909121 23016333 + 23016313 23016353 41 AACGCCCTGGTCATCTTCGTGATCCTTCGCTACGCCAAGAT AACGCCCTGGTCATCTTCGTTATCCTTCGCTACGCCAAGAT Direct Gain 0 0.973390034665251 0 0.999893248081207 prediction 0.946780069330503 Functional Gain - SSTR4 ENSG00000132671 CDS Human protein_coding chr20:23016333 chr20:23016333 synonymous SNV . 0 21 hPsi_associated_SNPs_102520 0 0 0 0 0 exosome 0 0.438863511848387 0.999786496162414 0 hPsi_site_1480 iPseU_CNN:0.999786496162414;iRNA_PseU:0 1481 chr2 97476947 97476947 1 + G A rs77892978 97476947 - 97476927 97476967 41 AGTTGAGAACCCATGGGTGTCACCACCTTCTCTCCAGGCTT AGTTGAGAACCCATGGGTGTTACCACCTTCTCTCCAGGCTT Direct Gain 0 0.973379918949159 0 0.996203422546387 prediction 0.946759837898318 Functional Gain - CNNM4 ENSG00000158158 UTR3 Human protein_coding chr2:97476947 chr2:97476947 . . 0 21 hPsi_associated_SNPs_102521 1 0 0 0 0 chromatin 0 0.438690115144888 0.992406845092774 0 hPsi_site_1481 iPseU_CNN:0.992406845092774;iRNA_PseU:0 1482 chr9 96326715 96326715 1 + G A UCEC 96326715 - 96326695 96326735 41 TGTATTGCACGTTTTAGAGTCATTATTCAAGGCACTTTCAG TGTATTGCACGTTTTAGAGTTATTATTCAAGGCACTTTCAG Direct Gain 0 0.973360493130492 0 0.855176508426666 prediction 0.946720986260983 Functional Gain - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96326715 chr9:96326715 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102522 0 0 0 0 0 Endoplasmic reticulum 0 0.438716067002409 0.710353016853332 0 hPsi_site_1482 iPseU_CNN:0.710353016853332;iRNA_PseU:0 1483 chr12 102107962 102107962 1 + C T BLCA 102107962 + 102107942 102107982 41 ACAAGCCAGAAGAACAAACTCTTGTTCCCCTTTAGGGGAGC ACAAGCCAGAAGAACAAACTTTTGTTCCCCTTTAGGGGAGC Direct Gain 0 0.973309776095223 0 0.924016177654266 prediction 0.946619552190445 Functional Gain - CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102107962 chr12:102107962 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_102523 0 0 1 0 2 Ribosome 0 0.438720727106967 0.848032355308532 0 hPsi_site_1483 iPseU_CNN:0.848032355308532;iRNA_PseU:0 1484 chr1 237863758 237863758 1 + G A COAD 237863758 - 237863738 237863778 41 AATTTACATACATATTAGGTCTTCTCCGAACTGATGCTGGC AATTTACATACATATTAGGTTTTCTCCGAACTGATGCTGGC Direct Gain 0 0.973298530858697 0 0.795211613178253 prediction 0.946597061717394 Functional Gain - RYR2 ENSG00000198626 CDS Human protein_coding chr1:237863758 chr1:237863758 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_102524 0 0 0 0 0 nucleolus 0 0.438701043354758 0.590423226356506 0 hPsi_site_1484 iPseU_CNN:0.590423226356506;iRNA_PseU:0 1485 chr20 23424636 23424636 1 + C A LUAD 23424636 - 23424616 23424656 41 GGGCAGGAAGAATTGCTCGTGTCATTCCTCTTGCATTTGGT GGGCAGGAAGAATTGCTCGTTTCATTCCTCTTGCATTTGGT Direct Gain 0 0.973296129208624 0 0.999999105930328 prediction 0.946592258417248 Functional Gain - CSTL1 ENSG00000125823 CDS Human protein_coding chr20:23424636 chr20:23424636 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_102525 0 0 0 0 0 unknown 0 0.438718537382386 0.999998211860656 0 hPsi_site_1485 iPseU_CNN:0.999998211860656;iRNA_PseU:0 1486 chr7 64166863 64166863 1 + C T LUAD 64166863 + 64166843 64166883 41 GTACGGGGCACAAAGGAGGTCATAATACAGTTAACCAATGT GTACGGGGCACAAAGGAGGTTATAATACAGTTAACCAATGT Direct Gain 0 0.973286709473109 0 0.300857245922089 prediction 0.946573418946217 Functional Gain - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64166863 chr7:64166863 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102526 0 0 1 0 0 Nucleus 0 0.438731317434343 0 0 hPsi_site_1486 iPseU_CNN:0;iRNA_PseU:0 1487 chr2 56408518 56408518 1 + G A rs59508375 56408518 - 56408498 56408538 41 GGTGGCCGGGGGCGGTGGCTCATAACTGTAATCCCAGCACT GGTGGCCGGGGGCGGTGGCTTATAACTGTAATCCCAGCACT Direct Gain 0 0.973279428092384 0 0.997035205364227 prediction 0.946558856184769 Functional Gain - LOC100129434 ENSG00000272180 ncRNA_exonic Human lincRNA chr2:56408518 chr2:56408518 . . 0 21 hPsi_associated_SNPs_102527 0 0 0 0 0 unknown 0 0.438718597568535 0.994070410728454 0 hPsi_site_1487 iPseU_CNN:0.994070410728454;iRNA_PseU:0 1488 chr7 76126698 76126698 1 + C T BLCA 76126698 + 76126678 76126718 41 CCATTGGACTCCCTGTGTGTCTTAGCCGCGCACCCCAGCCC CCATTGGACTCCCTGTGTGTTTTAGCCGCGCACCCCAGCCC Direct Gain 0 0.973276238229149 0 0.997088074684143 prediction 0.946552476458298 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76126698 chr7:76126698 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102528 0 0 0 0 1 Nucleus 0 0.43871845298009 0.994176149368286 0 hPsi_site_1488 iPseU_CNN:0.994176149368286;iRNA_PseU:0 1489 chr5 38418304 38418304 1 + G A HNSC 38418304 - 38418284 38418324 41 GCCAGGGCCTCATGTCAATTCTCCTCCCATTCACAGCGAGC GCCAGGGCCTCATGTCAATTTTCCTCCCATTCACAGCGAGC Direct Gain 0 0.97327613376632 0 0.814122915267944 prediction 0.946552267532641 Functional Gain - EGFLAM ENSG00000164318 CDS Human protein_coding chr5:38418304 chr5:38418304 nonsynonymous SNV 0.926 0 21 hPsi_associated_SNPs_102529 0 0 0 0 0 Cytosol 0 0.439355089549672 0.628245830535888 0 hPsi_site_1489 iPseU_CNN:0.628245830535888;iRNA_PseU:0 1490 chr7 3991404 3991404 1 + G T LUSC 3991404 + 3991384 3991424 41 ACCTGGAAGAGGAATGGAGTGAGAATCACCAGTGGCCTCCA ACCTGGAAGAGGAATGGAGTTAGAATCACCAGTGGCCTCCA Direct Gain 0 0.973240670430208 0 1 prediction 0.946481340860416 Functional Gain - SDK1 ENSG00000146555 CDS Human protein_coding chr7:3991404 chr7:3991404 synonymous SNV . 0 21 hPsi_associated_SNPs_102530 0 0 0 0 1 cytosol 0 0.438734100539285 1 0 hPsi_site_1490 iPseU_CNN:1;iRNA_PseU:0 1491 chr12 46230562 46230562 1 + C T SKCM 46230562 + 46230542 46230582 41 GGATTTGGGAGTCTTTATTTCATCCACCTCGAAAGCTGGGC GGATTTGGGAGTCTTTATTTTATCCACCTCGAAAGCTGGGC Direct Gain 0 0.973235946479142 0 0.986994981765747 prediction 0.946471892958285 Functional Gain - ARID2 ENSG00000189079 CDS Human protein_coding chr12:46230562 chr12:46230562 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102531 0 0 1 0 0 Nucleus 0 0.438718596119102 0.973989963531494 0 hPsi_site_1491 iPseU_CNN:0.973989963531494;iRNA_PseU:0 1492 chr3 39162529 39162529 1 + C T BLCA 39162529 + 39162509 39162549 41 CTAGGGCTAGTGTGTAGTTTCATCGAGCGCACCTTCATGGC CTAGGGCTAGTGTGTAGTTTTATCGAGCGCACCTTCATGGC Direct Gain 0 0.973235873741518 0 0.538696050643921 prediction 0.946471747483035 Functional Gain - TTC21A ENSG00000168026 CDS Human protein_coding chr3:39162529 chr3:39162529 synonymous SNV . 0 21 hPsi_associated_SNPs_102532 0 0 0 0 0 nucleus 0 0.43871520117695 0.077392101287842 0 hPsi_site_1492 iPseU_CNN:0.077392101287842;iRNA_PseU:0 1493 chr10 102738662 102738662 1 + G T BLCA 102738662 + 102738642 102738682 41 GCAAGGCCAGTGCAGTGGGTGATGATGACAAGGTGTACTAC GCAAGGCCAGTGCAGTGGGTTATGATGACAAGGTGTACTAC Direct Gain 0 0.973215685767583 0 0.966233015060425 prediction 0.946431371535166 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738662 chr10:102738662 nonsynonymous SNV 0.954 4 21 hPsi_associated_SNPs_102533 0 0 1 0 1 nucleoplasm 0 0.438704627805887 0.93246603012085 0 hPsi_site_1493 iPseU_CNN:0.93246603012085;iRNA_PseU:0 1494 chr5 128844806 128844806 1 + A T THCA 128844806 + 128844786 128844826 41 TCAATGAGGACTTCATATTTATTGAGCCACTCAATGATACA TCAATGAGGACTTCATATTTTTTGAGCCACTCAATGATACA Direct Gain 0 0.973199228891017 0 0.966034293174744 prediction 0.946398457782033 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:128844806 chr5:128844806 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102534 0 0 0 1 1 exosome 0 0.439190165267575 0.932068586349488 0 hPsi_site_1494 iPseU_CNN:0.932068586349488;iRNA_PseU:0 1495 chr1 12820790 12820790 1 + C T SKCM 12820790 + 12820770 12820810 41 GAAGCAGAGCACTTATACTTCATCCTACCCCAGACCACCGT GAAGCAGAGCACTTATACTTTATCCTACCCCAGACCACCGT Direct Gain 0 0.973188899009336 0 0.999802231788635 prediction 0.946377798018673 Functional Gain - C1orf158 ENSG00000157330 CDS Human protein_coding chr1:12820790 chr1:12820790 nonsynonymous SNV 0.021 0 21 hPsi_associated_SNPs_102535 0 0 0 0 1 Cytosol 0 0.438639282345866 0.99960446357727 0 hPsi_site_1495 iPseU_CNN:0.99960446357727;iRNA_PseU:0 1496 chr6 44387200 44387200 1 + C T BLCA 44387200 + 44387180 44387220 41 AATCAGGAAGCCCAGAACCTCATGGCCCTCACCAATGTGGA AATCAGGAAGCCCAGAACCTTATGGCCCTCACCAATGTGGA Direct Gain 0 0.973184300298873 0 0.43905508518219 prediction 0.946368600597746 Functional Gain - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44387200 chr6:44387200 synonymous SNV . 0 21 hPsi_associated_SNPs_102536 0 0 1 0 1 Nucleus 0 0.438718199170037 0 0 hPsi_site_1496 iPseU_CNN:0;iRNA_PseU:0 1497 chr12 27628527 27628527 1 + C T rs115667978 27628527 + 27628507 27628547 41 TTCCGCAGGTGTCTGAAGGGCATGTTCCTCAAGCTAAACTA TTCCGCAGGTGTCTGAAGGGTATGTTCCTCAAGCTAAACTA Direct Gain 0 0.973174234161754 0 0.902672708034515 prediction 0.946348468323508 Functional Gain - SMCO2 ENSG00000165935 CDS Human protein_coding chr12:27628527 chr12:27628527 synonymous SNV . 0 21 hPsi_associated_SNPs_102537 0 0 0 0 1 exosome 0 0.438718592967481 0.80534541606903 0 hPsi_site_1497 iPseU_CNN:0.80534541606903;iRNA_PseU:0 1498 chr19 19033467 19033467 1 + C T BLCA 19033467 + 19033447 19033487 41 CTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCA CTGCTGGTGCCTGAGAAGGTTAAGGACGCCTACCTGGTCCA Direct Gain 0 0.973146846857231 0 0.993516206741333 prediction 0.946293693714462 Functional Gain - DDX49 ENSG00000105671 CDS Human protein_coding chr19:19033467 chr19:19033467 synonymous SNV . 0 21 hPsi_associated_SNPs_102538 0 0 0 0 1 Cytosol 0 0.438716150635417 0.987032413482666 0 hPsi_site_1498 iPseU_CNN:0.987032413482666;iRNA_PseU:0 1499 chr2 46587850 46587850 1 + C A GBM 46587850 - 46587830 46587870 41 ACAGTACGGCCTCTGTTGGTGACCGTGCACTTCATCCTCAT ACAGTACGGCCTCTGTTGGTTACCGTGCACTTCATCCTCAT Direct Gain 0 0.973134270115624 0 0.982386767864227 prediction 0.946268540231248 Functional Gain - EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46587850 chr2:46587850 synonymous SNV . 0 21 hPsi_associated_SNPs_102539 0 0 0 0 0 Cytosol 0 0.438497311513946 0.964773535728454 0 hPsi_site_1499 iPseU_CNN:0.964773535728454;iRNA_PseU:0 1500 chr2 149243455 149243455 1 + G T SKCM 149243455 + 149243435 149243475 41 GAATCTCCAGGCGTTCCAAGGACAGTCCACAATTCCTTGCC GAATCTCCAGGCGTTCCAAGTACAGTCCACAATTCCTTGCC Direct Gain 0 0.973131443516626 0 0.999967396259308 prediction 0.946262887033253 Functional Gain - MBD5 ENSG00000204406 CDS Human protein_coding chr2:149243455 chr2:149243455 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102540 0 0 0 0 1 chromatin 0 0.438909379547676 0.999934792518616 0 hPsi_site_1500 iPseU_CNN:0.999934792518616;iRNA_PseU:0 1501 chr15 45443405 45443405 1 + C T UCEC 45443405 + 45443385 45443425 41 AGACTGCAGTGCCCCATGGACACAGACCCTCCCCAGGAGAT AGACTGCAGTGCCCCATGGATACAGACCCTCCCCAGGAGAT Direct Gain 0 0.973126366839863 0 0.999774217605591 prediction 0.946252733679726 Functional Gain - DUOX1 ENSG00000137857 CDS Human protein_coding chr15:45443405 chr15:45443405 synonymous SNV . 0 21 hPsi_associated_SNPs_102541 0 0 0 0 2 chromatin 0 0.437920702878252 0.999548435211182 0 hPsi_site_1501 iPseU_CNN:0.999548435211182;iRNA_PseU:0 1502 chr18 22017968 22017968 1 + G T UCEC 22017968 + 22017948 22017988 41 TGTGGGTGGAGAAAATAAGAGATGTTCTTATACAAAAATCT TGTGGGTGGAGAAAATAAGATATGTTCTTATACAAAAATCT Direct Gain 0 0.973066855431088 0 0.999709606170654 prediction 0.946133710862177 Functional Gain - IMPACT ENSG00000154059 CDS Human protein_coding chr18:22017968 chr18:22017968 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102542 0 0 0 0 2 Ribosome 0 0.439059553332948 0.999419212341308 0 hPsi_site_1502 iPseU_CNN:0.999419212341308;iRNA_PseU:0 1503 chr19 44590866 44590866 1 + C T SKCM 44590866 + 44590846 44590886 41 GAAGAGATTTTATATGAATTCACAGGGCCATTCACATCAGA GAAGAGATTTTATATGAATTTACAGGGCCATTCACATCAGA Direct Gain 0 0.973040326916485 0 0.996515154838562 prediction 0.94608065383297 Functional Gain - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44590866 chr19:44590866 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_102543 0 0 1 0 0 exosome 0 0.43871858227114 0.993030309677124 0 hPsi_site_1503 iPseU_CNN:0.993030309677124;iRNA_PseU:0 1504 chr19 3207446 3207446 1 + C T COAD 3207446 + 3207426 3207466 41 GGCATTGCTGCCTACCTCGGCATGGCCTACGTGGCTGTCCA GGCATTGCTGCCTACCTCGGTATGGCCTACGTGGCTGTCCA Direct Gain 0 0.973037922479204 0 0.999999403953552 prediction 0.946075844958407 Functional Gain - NCLN ENSG00000125912 CDS Human protein_coding chr19:3207446 chr19:3207446 synonymous SNV . 0 21 hPsi_associated_SNPs_102544 0 0 1 0 1 Ribosome 0 0.438718592955312 0.999998807907104 0 hPsi_site_1504 iPseU_CNN:0.999998807907104;iRNA_PseU:0 1505 chr20 49127034 49127034 1 + G A rs184251638 49127034 - 49127014 49127054 41 GGCGGCTGCTGCGCCTCCTTCTCGGCCCACTGCGCCGTCTG GGCGGCTGCTGCGCCTCCTTTTCGGCCCACTGCGCCGTCTG Direct Gain 0 0.973006144953538 0 0.999886691570282 prediction 0.946012289907076 Functional Gain - PTPN1 ENSG00000196396 UTR5 Human protein_coding chr20:49127034 chr20:49127034 . . 0 21 hPsi_associated_SNPs_102545 0 0 0 0 0 Ribosome 0 0.438718338942733 0.999773383140564 0 hPsi_site_1505 iPseU_CNN:0.999773383140564;iRNA_PseU:0 1506 chr9 96425212 96425212 1 + G A UCEC 96425212 - 96425192 96425232 41 TGAACCACATCTTTGTTGGGCACACTCAGGACACTCTTTGT TGAACCACATCTTTGTTGGGTACACTCAGGACACTCTTTGT Direct Gain 0 0.97300190607375 0 0.999991893768311 prediction 0.946003812147501 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96425212 chr9:96425212 synonymous SNV . 0 21 hPsi_associated_SNPs_102546 0 0 0 0 0 chromatin 0 0.438718395363588 0.999983787536622 0 hPsi_site_1506 iPseU_CNN:0.999983787536622;iRNA_PseU:0 1507 chrX 153543601 153543601 1 + G A OV 153543601 - 153543581 153543621 41 GAAAGTAGAGTACCTGGTGTCACCATCCAGCACAACGACTC GAAAGTAGAGTACCTGGTGTTACCATCCAGCACAACGACTC Direct Gain 0 0.972999796389941 0 0.999710440635681 prediction 0.945999592779883 Functional Gain - TKTL1 ENSG00000007350 CDS Human protein_coding chrX:153543601 chrX:153543601 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102547 0 0 0 0 0 exosome 0 0.438660295978614 0.999420881271362 0 hPsi_site_1507 iPseU_CNN:0.999420881271362;iRNA_PseU:0 1508 chr9 136291344 136291344 1 + A T BRCA 136291344 + 136291324 136291364 41 ACCTGGAGTTGCCTGATGGTAACCGGCAGGTGCGGGGCGTC ACCTGGAGTTGCCTGATGGTTACCGGCAGGTGCGGGGCGTC Direct Gain 0 0.972990047420341 0 0.999895036220551 prediction 0.945980094840683 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136291344 chr9:136291344 nonsynonymous SNV 0.993 3 21 hPsi_associated_SNPs_102548 0 0 0 0 1 nucleus 0 0.438708819424191 0.999790072441102 0 hPsi_site_1508 iPseU_CNN:0.999790072441102;iRNA_PseU:0 1509 chr4 124424 124424 1 + C T BLCA 124424 + 124404 124444 41 CCAGAGCTCGGTTAGGGCCTCATCGCTCTGCTCCCGCTCCT CCAGAGCTCGGTTAGGGCCTTATCGCTCTGCTCCCGCTCCT Direct Gain 0 0.972985424094106 0 0.99971479177475 prediction 0.945970848188211 Functional Gain - ZNF718 ENSG00000250312;ENSG00000256143 ncRNA_exonic Human other chr4:124424 chr4:124424 . . 0 21 hPsi_associated_SNPs_102549 0 0 1 0 0 Cytosol 0 0.438716261170814 0.9994295835495 0 hPsi_site_1509 iPseU_CNN:0.9994295835495;iRNA_PseU:0 1510 chr21 39671789 39671789 1 + G A BLCA 39671789 - 39671769 39671809 41 TGAATCAAGAGGCTCTTCCTCATATTGGCTACCTGAATCAC TGAATCAAGAGGCTCTTCCTTATATTGGCTACCTGAATCAC Direct Gain 0 0.972885111446862 0 0.989359974861145 prediction 0.945770222893724 Functional Gain - KCNJ15 ENSG00000157551 CDS Human protein_coding chr21:39671789 chr21:39671789 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102550 0 0 0 0 0 exosome 0 0.438707182042476 0.97871994972229 0 hPsi_site_1510 iPseU_CNN:0.97871994972229;iRNA_PseU:0 1511 chrX 130222624 130222624 1 + G A OV 130222624 - 130222604 130222644 41 GAACGGGCAGTGCCGGAAGGCACAGCTGGCTCCTCAGAGGA GAACGGGCAGTGCCGGAAGGTACAGCTGGCTCCTCAGAGGA Direct Gain 0 0.972855295503361 0 0.99998539686203 prediction 0.945710591006721 Functional Gain - ARHGAP36 ENSG00000147256 CDS Human protein_coding chrX:130222624 chrX:130222624 synonymous SNV . 0 21 hPsi_associated_SNPs_102551 0 0 0 0 0 unknown 0 0.438718592973333 0.99997079372406 0 hPsi_site_1511 iPseU_CNN:0.99997079372406;iRNA_PseU:0 1512 chr22 20043582 20043582 1 + G A rs112944224 20043582 - 20043562 20043602 41 AAGCACAAGGGTGACCTCTGCATAGAAACAGTCCCCCACCC AAGCACAAGGGTGACCTCTGTATAGAAACAGTCCCCCACCC Direct Gain 0 0.972831920975866 0 0.999931812286377 prediction 0.945663841951732 Functional Gain - TANGO2 ENSG00000183597 intronic Human protein_coding chr22:20043582 chr22:20043582 . . 0 21 hPsi_associated_SNPs_102552 0 0 0 0 0 Nucleus 0 0.438718592896626 0.999863624572754 0 hPsi_site_1512 iPseU_CNN:0.999863624572754;iRNA_PseU:0 1513 chr10 70960106 70960106 1 + G A HNSC 70960106 - 70960086 70960126 41 TTGAGAGGTTGTGATTGGTTCTAGTTCTCTCTCTCCCTTTT TTGAGAGGTTGTGATTGGTTTTAGTTCTCTCTCTCCCTTTT Direct Gain 0 0.97281501299256 0 0.993622422218323 prediction 0.945630025985121 Functional Gain - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70960106 chr10:70960106 nonsynonymous SNV 0.864 1 21 hPsi_associated_SNPs_102553 0 0 0 0 0 Cytosol 0 0.4387186697906 0.987244844436646 0 hPsi_site_1513 iPseU_CNN:0.987244844436646;iRNA_PseU:0 1514 chr12 6929660 6929660 1 + G A rs149728907 6929660 - 6929640 6929680 41 GGGGCAGGCGCAGAGCCTGGCACAATCACCTTTGAGGTCCC GGGGCAGGCGCAGAGCCTGGTACAATCACCTTTGAGGTCCC Direct Gain 0 0.972811281697247 0 0.995812296867371 prediction 0.945622563394494 Functional Gain - CD4 ENSG00000010610 UTR3 Human protein_coding chr12:6929660 chr12:6929660 . . 0 21 hPsi_associated_SNPs_102554 0 0 0 0 0 Endoplasmic reticulum 0 0.438717180352165 0.991624593734742 0 hPsi_site_1514 iPseU_CNN:0.991624593734742;iRNA_PseU:0 1515 chr6 155561678 155561678 1 + C A LUSC 155561678 - 155561658 155561698 41 AAACTCCTGCACAGTGCAGTGATCTGCTCAGCACTCTGAGA AAACTCCTGCACAGTGCAGTTATCTGCTCAGCACTCTGAGA Direct Gain 0 0.97277590671962 0 0.999294281005859 prediction 0.945551813439239 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155561678 chr6:155561678 synonymous SNV . 0 21 hPsi_associated_SNPs_102555 0 0 0 0 0 Cytosol 0 0.438752607908866 0.998588562011718 0 hPsi_site_1515 iPseU_CNN:0.998588562011718;iRNA_PseU:0 1516 chr10 25464361 25464361 1 + G A HNSC 25464361 - 25464341 25464381 41 CAGAGGAGTAAGGGGTAAGCCATGGCTCCCATCTGCCTCCC CAGAGGAGTAAGGGGTAAGCTATGGCTCCCATCTGCCTCCC Direct Gain 0 0.972767064901446 0 0.999744176864624 prediction 0.945534129802892 Functional Gain - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25464361 chr10:25464361 nonsynonymous SNV 0.924 1 21 hPsi_associated_SNPs_102556 0 0 0 0 0 Endoplasmic reticulum 0 0.438718620404864 0.999488353729248 0 hPsi_site_1516 iPseU_CNN:0.999488353729248;iRNA_PseU:0 1517 chr2 26950833 26950833 1 + C T SKCM 26950833 + 26950813 26950853 41 CAGGCCTACTACTACTGCTTCATCACCCTCACCACCATCGG CAGGCCTACTACTACTGCTTTATCACCCTCACCACCATCGG Direct Gain 0 0.972766278341928 0 0.935873210430145 prediction 0.945532556683856 Functional Gain - KCNK3 ENSG00000171303 CDS Human protein_coding chr2:26950833 chr2:26950833 synonymous SNV . 0 21 hPsi_associated_SNPs_102557 0 0 0 0 0 Cytosol 0 0.438718964000661 0.87174642086029 0 hPsi_site_1517 iPseU_CNN:0.87174642086029;iRNA_PseU:0 1518 chr1 186934669 186934669 1 + C A GBM 186934669 - 186934649 186934689 41 AAAGTCAAAGGAGATTATGAGATCAACCCCTCTCTGAGGTC AAAGTCAAAGGAGATTATGATATCAACCCCTCTCTGAGGTC Direct Gain 0 0.972752130898314 0 0.97205775976181 prediction 0.945504261796628 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186934669 chr1:186934669 nonsynonymous SNV 0.834 2 21 hPsi_associated_SNPs_102558 0 0 0 0 0 Nucleus 0 0.438787526806815 0.94411551952362 0 hPsi_site_1518 iPseU_CNN:0.94411551952362;iRNA_PseU:0 1519 chr2 74043846 74043846 1 + G T BLCA 74043846 + 74043826 74043866 41 GAGCCTGTTTCCACTGCTGTGACCAGTCTCCGGTCACTGCC GAGCCTGTTTCCACTGCTGTTACCAGTCTCCGGTCACTGCC Direct Gain 0 0.972742718077357 0 0.709626734256744 prediction 0.945485436154714 Functional Gain - C2orf78 ENSG00000187833 CDS Human protein_coding chr2:74043846 chr2:74043846 synonymous SNV . 0 21 hPsi_associated_SNPs_102559 0 0 0 0 0 unknown 0 0.438699106882267 0.419253468513488 0 hPsi_site_1519 iPseU_CNN:0.419253468513488;iRNA_PseU:0 1520 chr17 72202211 72202211 1 + C T rs145089219 72202211 + 72202191 72202231 41 GTGGCTTTAAAGGTAGTGGTCACAGTCCCCTGGGGACAGTA GTGGCTTTAAAGGTAGTGGTTACAGTCCCCTGGGGACAGTA Direct Gain 0 0.972740264813184 0 0.999836921691895 prediction 0.945480529626367 Functional Gain - RPL38 ENSG00000172809 intronic Human protein_coding chr17:72202211 chr17:72202211 . . 0 21 hPsi_associated_SNPs_102560 0 0 1 0 0 Ribosome 0 0.43874352744224 0.99967384338379 0 hPsi_site_1520 iPseU_CNN:0.99967384338379;iRNA_PseU:0 1521 chrX 68060215 68060215 1 + C T rs35567709 68060215 + 68060195 68060235 41 GGTTGCGTCATCTTCCTGCTCATCATCATCTTCCTGACGGT GGTTGCGTCATCTTCCTGCTTATCATCATCTTCCTGACGGT Direct Gain 0 0.97273696875927 0 0.270438253879547 prediction 0.94547393751854 Functional Gain - EFNB1 ENSG00000090776 CDS Human protein_coding chrX:68060215 chrX:68060215 synonymous SNV . 0 21 hPsi_associated_SNPs_102561 0 0 1 0 0 Endoplasmic reticulum 0 0.438717430886536 0 0 hPsi_site_1521 iPseU_CNN:0;iRNA_PseU:0 1522 chr15 81601431 81601431 1 + C T rs188536293 81601431 + 81601411 81601451 41 AAATGGATTTATTAGAATTTCATATGACATTCATGCCTGGC AAATGGATTTATTAGAATTTTATATGACATTCATGCCTGGC Direct Gain 0 0.972716296781262 0 0.807469606399536 prediction 0.945432593562525 Functional Gain - IL16 ENSG00000271725 ncRNA_intronic Human 3prime_overlapping_ncRNA chr15:81601431 chr15:81601431 . . 0 21 hPsi_associated_SNPs_102562 0 0 0 1 0 Nucleus 0 0.438718945634961 0.614939212799072 0 hPsi_site_1522 iPseU_CNN:0.614939212799072;iRNA_PseU:0 1523 chr5 73981280 73981280 1 + G A BLCA 73981280 - 73981260 73981300 41 AGATGCAGCAGGTTCGGGGTCATCTTCACCAAGAGCGGCAG AGATGCAGCAGGTTCGGGGTTATCTTCACCAAGAGCGGCAG Direct Gain 0 0.972694988510819 0 0.991753220558167 prediction 0.945389977021637 Functional Gain - HEXB ENSG00000049860 CDS Human protein_coding chr5:73981280 chr5:73981280 nonsynonymous SNV 0.006 1 21 hPsi_associated_SNPs_102563 0 0 0 0 0 Cytosol 0 0.438718305243711 0.983506441116334 0 hPsi_site_1523 iPseU_CNN:0.983506441116334;iRNA_PseU:0 1524 chr8 142199135 142199135 1 + C T UCEC 142199135 + 142199115 142199155 41 GTGTGGGTTGGCTCGGAAGACTCCGTCATCTACATCATCAA GTGTGGGTTGGCTCGGAAGATTCCGTCATCTACATCATCAA Direct Gain 0 0.972670144583525 0 0.999905824661255 prediction 0.94534028916705 Functional Gain - DENND3 ENSG00000105339 CDS Human protein_coding chr8:142199135 chr8:142199135 synonymous SNV . 0 21 hPsi_associated_SNPs_102564 0 0 0 0 1 Nucleus 0 0.438124476537688 0.99981164932251 0 hPsi_site_1524 iPseU_CNN:0.99981164932251;iRNA_PseU:0 1525 chr8 75737595 75737595 1 + C A UCEC 75737595 - 75737575 75737615 41 AGAGCTGCTTCAATATCAGTGAAATTATTGGTTGGCGGGGA AGAGCTGCTTCAATATCAGTTAAATTATTGGTTGGCGGGGA Direct Gain 0 0.972645444980638 0 0.534870624542236 prediction 0.945290889961277 Functional Gain - PI15 ENSG00000137558 CDS Human protein_coding chr8:75737595 chr8:75737595 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102565 0 0 0 0 0 exosome 0 0.438718603001606 0.069741249084472 0 hPsi_site_1525 iPseU_CNN:0.069741249084472;iRNA_PseU:0 1526 chr13 113773019 113773019 1 + G A SKCM 113773019 - 113772999 113773039 41 TGCTGCAGGCAGTCCTGGGTCATCAGCCGGGGCACGTTGAG TGCTGCAGGCAGTCCTGGGTTATCAGCCGGGGCACGTTGAG Direct Gain 0 0.972643416445919 0 0.013263076543808 prediction 0.945286832891838 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113773019 chr13:113773019 nonsynonymous SNV 0.920 0 21 hPsi_associated_SNPs_102566 0 0 0 0 0 insoluble cytoplasm 0 0.438712933213179 0 0 hPsi_site_1526 iPseU_CNN:0;iRNA_PseU:0 1527 chr1 152285936 152285936 1 + C T LUAD 152285936 + 152285916 152285956 41 ATGGGCAGAGTCAGGCTGTTCATGAGTGCTCACCTGGTAGA ATGGGCAGAGTCAGGCTGTTTATGAGTGCTCACCTGGTAGA Direct Gain 0 0.972626278041169 0 0.878714561462402 prediction 0.945252556082339 Functional Gain - FLG ENSG00000143631 CDS Human protein_coding chr1:152285936 chr1:152285936 nonsynonymous SNV 0.000 3 21 hPsi_associated_SNPs_102567 0 0 0 0 0 exosome 0 0.438716599914582 0.757429122924804 0 hPsi_site_1527 iPseU_CNN:0.757429122924804;iRNA_PseU:0 1528 chr3 41275047 41275047 1 + C T LIHC 41275047 + 41275027 41275067 41 TGGAAGGTCTCCTTGGGACTCTTGTTCAGCTTCTGGGTTCA TGGAAGGTCTCCTTGGGACTTTTGTTCAGCTTCTGGGTTCA Direct Gain 0 0.972624825952737 0 0.91970419883728 prediction 0.945249651905473 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275047 chr3:41275047 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102568 0 0 1 0 1 Nucleus 0 0.438718589956653 0.83940839767456 0 hPsi_site_1528 iPseU_CNN:0.83940839767456;iRNA_PseU:0 1529 chr6 151939129 151939129 1 + G A HNSC 151939129 - 151939109 151939149 41 TCAGGAAGAGCAAGGCTGGTCACGTTCAAGCCTAGCATCTG TCAGGAAGAGCAAGGCTGGTTACGTTCAAGCCTAGCATCTG Direct Gain 0 0.972614830465042 0 1 prediction 0.945229660930084 Functional Gain - CCDC170 ENSG00000120262 CDS Human protein_coding chr6:151939129 chr6:151939129 synonymous SNV . 0 21 hPsi_associated_SNPs_102569 0 0 0 0 0 Nucleus 0 0.439669149341904 1 0 hPsi_site_1529 iPseU_CNN:1;iRNA_PseU:0 1530 chr5 150858926 150858926 1 + C T SKCM 150858926 + 150858906 150858946 41 TACTCCATCGGGATCTTTTTCACCTACGCACTCCAGTTCTA TACTCCATCGGGATCTTTTTTACCTACGCACTCCAGTTCTA Direct Gain 0 0.972611411659245 0 0.135258108377457 prediction 0.945222823318491 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150858926 chr5:150858926 synonymous SNV . 0 21 hPsi_associated_SNPs_102570 0 0 0 0 1 Endoplasmic reticulum 0 0.438718597489436 0 0 hPsi_site_1530 iPseU_CNN:0;iRNA_PseU:0 1531 chr20 210404 210404 1 + G A BLCA 210404 - 210384 210424 41 GAAAGATCCACATTACTGCTCTTCTGCTTCCTCTAGCTCCA GAAAGATCCACATTACTGCTTTTCTGCTTCCTCTAGCTCCA Direct Gain 0 0.972606326485875 0 0.997523009777069 prediction 0.94521265297175 Functional Gain - DEFB129 ENSG00000125903 CDS Human protein_coding chr20:210404 chr20:210404 nonsynonymous SNV 0.009 2 21 hPsi_associated_SNPs_102571 0 0 0 0 0 exosome 0 0.438950055457835 0.995046019554138 0 hPsi_site_1531 iPseU_CNN:0.995046019554138;iRNA_PseU:0 1532 chr1 150300866 150300866 1 + G A HNSC 150300866 - 150300846 150300886 41 CCCAGGGATCACCTCTGGCTCTTCTTCCACCTCCTCAAAAC CCCAGGGATCACCTCTGGCTTTTCTTCCACCTCCTCAAAAC Direct Gain 0 0.972568475177301 0 0.986109435558319 prediction 0.945136950354603 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150300866 chr1:150300866 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102572 0 0 0 0 0 Nucleus 0 0.438087008789924 0.972218871116638 0 hPsi_site_1532 iPseU_CNN:0.972218871116638;iRNA_PseU:0 1533 chr1 248637204 248637204 1 + G T LUAD 248637204 + 248637184 248637224 41 AAATCCTGAGTTTTTTCTGTGAGACTCCTGCCCTGCTGAAG AAATCCTGAGTTTTTTCTGTTAGACTCCTGCCCTGCTGAAG Direct Gain 0 0.972567907722823 0 0.987850189208984 prediction 0.945135815445647 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248637204 chr1:248637204 stopgain 0.036 0 21 hPsi_associated_SNPs_102573 0 0 0 0 0 unknown 0 0.438717367711311 0.975700378417968 0 hPsi_site_1533 iPseU_CNN:0.975700378417968;iRNA_PseU:0 1534 chr1 46727052 46727052 1 + G A BLCA 46727052 - 46727032 46727072 41 CTGAGAGTCAAGTACCTCGTCACATATGACCAGACCAACAC CTGAGAGTCAAGTACCTCGTTACATATGACCAGACCAACAC Direct Gain 0 0.972556910593603 0 0.999998211860657 prediction 0.945113821187206 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46727052 chr1:46727052 nonsynonymous SNV 0.994 5 21 hPsi_associated_SNPs_102574 0 0 0 0 0 Ribosome 0 0.438424721140069 0.999996423721314 0 hPsi_site_1534 iPseU_CNN:0.999996423721314;iRNA_PseU:0 1535 chr11 128628202 128628202 1 + G A LUSC 128628202 - 128628182 128628222 41 CCTGGATCCATTCATGTGGTCATACTCCCGCTTGACGTTGA CCTGGATCCATTCATGTGGTTATACTCCCGCTTGACGTTGA Direct Gain 0 0.972554441207994 0 0.999497830867767 prediction 0.945108882415988 Functional Gain - FLI1 ENSG00000151702 CDS Human protein_coding chr11:128628202 chr11:128628202 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102575 0 0 0 0 0 Endoplasmic reticulum 0 0.439342910311824 0.998995661735534 0 hPsi_site_1535 iPseU_CNN:0.998995661735534;iRNA_PseU:0 1536 chr17 70117691 70117691 1 + C A LUSC 70117691 - 70117671 70117711 41 AGATCGGGCTCGCCCTTGGGGAACGTGTTCTCCTGGGGCCG AGATCGGGCTCGCCCTTGGGTAACGTGTTCTCCTGGGGCCG Direct Gain 0 0.972499554363345 0 0.999886870384216 prediction 0.94499910872669 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70117691 chr17:70117691 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102576 0 0 0 0 0 Cytosol 0 0.438718571713487 0.999773740768432 0 hPsi_site_1536 iPseU_CNN:0.999773740768432;iRNA_PseU:0 1537 chr9 35044753 35044753 1 + G A KICH 35044753 - 35044733 35044773 41 TGGGGAACTTCTCTTTGTTGCACATTTCTCCACACAAGTTC TGGGGAACTTCTCTTTGTTGTACATTTCTCCACACAAGTTC Direct Gain 0 0.972489268100541 0 0.308899343013763 prediction 0.944978536201083 Functional Gain - C9orf131 ENSG00000174038 CDS Human protein_coding chr9:35044753 chr9:35044753 synonymous SNV . 0 21 hPsi_associated_SNPs_102577 0 0 0 0 0 exosome 0 0.431619705674115 0 0 hPsi_site_1537 iPseU_CNN:0;iRNA_PseU:0 1538 chr1 109806324 109806324 1 + C T LUSC 109806324 + 109806304 109806344 41 CAACCCTGGTACCTCAGCCTCATGTTCCGCACGCGCCAGGC CAACCCTGGTACCTCAGCCTTATGTTCCGCACGCGCCAGGC Direct Gain 0 0.972468887836534 0 0.996665596961975 prediction 0.944937775673069 Functional Gain - CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806324 chr1:109806324 synonymous SNV . 0 21 hPsi_associated_SNPs_102578 0 0 1 0 2 Endoplasmic reticulum 0 0.449279765977693 0.99333119392395 0 hPsi_site_1538 iPseU_CNN:0.99333119392395;iRNA_PseU:0 1539 chr19 11670292 11670292 1 + G A rs144798364 11670292 - 11670272 11670312 41 ATTCAGCCATAAGGTTATTTCATATTCCTCACTTGCCGCTC ATTCAGCCATAAGGTTATTTTATATTCCTCACTTGCCGCTC Direct Gain 0 0.972450327447039 0 0.999607801437378 prediction 0.944900654894079 Functional Gain - ELOF1 ENSG00000198551 UTR5 Human protein_coding chr19:11670292 chr19:11670292 . . 0 21 hPsi_associated_SNPs_102579 0 0 0 0 0 Ribosome 0 0.438793836755583 0.999215602874756 0 hPsi_site_1539 iPseU_CNN:0.999215602874756;iRNA_PseU:0 1540 chr12 54964082 54964082 1 + G A LUSC 54964082 - 54964062 54964102 41 AAAAACAATGGTCCTCAGGGCATGGTCATCTGCTGCCTGGT AAAAACAATGGTCCTCAGGGTATGGTCATCTGCTGCCTGGT Direct Gain 0 0.97242390318781 0 0.824069559574127 prediction 0.94484780637562 Functional Gain - PDE1B ENSG00000123360 CDS Human protein_coding chr12:54964082 chr12:54964082 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_102580 0 0 0 0 0 exosome 0 0.43871859740863 0.648139119148254 0 hPsi_site_1540 iPseU_CNN:0.648139119148254;iRNA_PseU:0 1541 chr10 115804344 115804344 1 + C T BLCA 115804344 + 115804324 115804364 41 AGCATCGAGACCCTGTGTGTCATTGCCCTGGACCGCTACCT AGCATCGAGACCCTGTGTGTTATTGCCCTGGACCGCTACCT Direct Gain 0 0.972415363901384 0 0.999567866325378 prediction 0.944830727802769 Functional Gain - ADRB1 ENSG00000043591 CDS Human protein_coding chr10:115804344 chr10:115804344 synonymous SNV . 0 21 hPsi_associated_SNPs_102581 0 0 1 0 0 Nucleus 0 0.438725920436663 0.999135732650756 0 hPsi_site_1541 iPseU_CNN:0.999135732650756;iRNA_PseU:0 1542 chr1 244218360 244218360 1 + C A UCEC 244218360 - 244218340 244218380 41 TTGAGGGTGTACATGCAAGAGAAAGTCTTCCCACACAGCGA TTGAGGGTGTACATGCAAGATAAAGTCTTCCCACACAGCGA Direct Gain 0 0.972409983416425 0 0.593387186527252 prediction 0.944819966832851 Functional Gain - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218360 chr1:244218360 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102582 0 0 0 0 0 Cytosol 0 0.43870697121173 0.186774373054504 0 hPsi_site_1542 iPseU_CNN:0.186774373054504;iRNA_PseU:0 1543 chr17 7405883 7405883 1 + G A LUAD 7405883 - 7405863 7405903 41 CGCACAGTCGCGTCGTACTTCACCATCACTGACTCCATGGA CGCACAGTCGCGTCGTACTTTACCATCACTGACTCCATGGA Direct Gain 0 0.972396498540083 0 0.998614311218262 prediction 0.944792997080165 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7405883 chr17:7405883 synonymous SNV . 0 21 hPsi_associated_SNPs_102583 0 0 0 0 0 Nucleus 0 0.434230053107109 0.997228622436524 0 hPsi_site_1543 iPseU_CNN:0.997228622436524;iRNA_PseU:0 1544 chr11 58384940 58384940 1 + C T BLCA 58384940 + 58384920 58384960 41 AGCCTTCAGATGGTCAGGGTCTTCCTCTTCTTCCTGAGCCC AGCCTTCAGATGGTCAGGGTTTTCCTCTTCTTCCTGAGCCC Direct Gain 0 0.972376641918667 0 0.358457744121552 prediction 0.944753283837333 Functional Gain - ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58384940 chr11:58384940 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102584 0 0 1 3 0 chromatin 0 0.438718589090412 0 0 hPsi_site_1544 iPseU_CNN:0;iRNA_PseU:0 1545 chr1 248525470 248525470 1 + G T COAD 248525470 + 248525450 248525490 41 ACATTCACTCCCATCACCATGACCTTCCCCTTCCGTGGATC ACATTCACTCCCATCACCATTACCTTCCCCTTCCGTGGATC Direct Gain 0 0.972342151236896 0 0.996524751186371 prediction 0.944684302473792 Functional Gain - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525470 chr1:248525470 nonsynonymous SNV 0.392 3 21 hPsi_associated_SNPs_102585 0 0 0 0 0 unknown 0 0.437382645493833 0.993049502372742 0 hPsi_site_1545 iPseU_CNN:0.993049502372742;iRNA_PseU:0 1546 chr12 131476803 131476803 1 + C A LGG 131476803 - 131476783 131476823 41 TGTCAGGTTGGTTATGATGGGATGGTAGGCATCTGTGGGCA TGTCAGGTTGGTTATGATGGTATGGTAGGCATCTGTGGGCA Direct Gain 0 0.972330914042678 0 0.0733322203159332 prediction 0.944661828085357 Functional Gain - ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131476803 chr12:131476803 nonsynonymous SNV 0.146 4 21 hPsi_associated_SNPs_102586 0 0 0 0 0 chromatin 0 0.438714626973732 0 0 hPsi_site_1546 iPseU_CNN:0;iRNA_PseU:0 1547 chrX 64953091 64953091 1 + C A UCEC 64953091 - 64953071 64953111 41 AATTTCTTATCATTGAAAGAGATGTTCCTGATTTCACTCCA AATTTCTTATCATTGAAAGATATGTTCCTGATTTCACTCCA Direct Gain 0 0.972310125968892 0 0.980260074138641 prediction 0.944620251937784 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64953091 chrX:64953091 synonymous SNV . 0 21 hPsi_associated_SNPs_102587 0 0 0 0 0 Ribosome 0 0.438497273409641 0.960520148277282 0 hPsi_site_1547 iPseU_CNN:0.960520148277282;iRNA_PseU:0 1548 chrX 151908869 151908869 1 + G A LUSC 151908869 - 151908849 151908889 41 GAGGCTCGTGGTTTCCTGGACATCTTCACCAGACCAGTGTC GAGGCTCGTGGTTTCCTGGATATCTTCACCAGACCAGTGTC Direct Gain 0 0.972308078404106 0 0.829434633255005 prediction 0.944616156808211 Functional Gain - CSAG1 ENSG00000198930 CDS Human protein_coding chrX:151908869 chrX:151908869 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_102588 0 0 0 0 0 Ribosome 0 0.438677407629239 0.65886926651001 0 hPsi_site_1548 iPseU_CNN:0.65886926651001;iRNA_PseU:0 1549 chr11 64060283 64060283 1 + C A rs2232411 64060283 - 64060263 64060303 41 CACAGACATCCCTCTGGCTGGACACACCCAGTCCCCCTCCT CACAGACATCCCTCTGGCTGTACACACCCAGTCCCCCTCCT Direct Gain 0 0.972296138133505 0 0.987314283847809 prediction 0.94459227626701 Functional Gain - KCNK4-TEX40 ENSG00000257069 ncRNA_intronic Human processed_transcript chr11:64060283 chr11:64060283 . . 0 21 hPsi_associated_SNPs_102589 0 0 0 0 0 unknown 0 0.438253307382892 0.974628567695618 0 hPsi_site_1549 iPseU_CNN:0.974628567695618;iRNA_PseU:0 1550 chr5 7626297 7626297 1 + C T SKCM 7626297 + 7626277 7626317 41 TAGATCCTGGCCAATGTGATCATTTTCATCTGTGGGAACCT TAGATCCTGGCCAATGTGATTATTTTCATCTGTGGGAACCT Direct Gain 0 0.972282827323883 0 0.911874115467072 prediction 0.944565654647766 Functional Gain - ADCY2 ENSG00000078295 CDS Human protein_coding chr5:7626297 chr5:7626297 synonymous SNV 1.000 0 21 hPsi_associated_SNPs_102590 0 0 0 0 1 exosome 0 0.438718592991837 0.823748230934144 0 hPsi_site_1550 iPseU_CNN:0.823748230934144;iRNA_PseU:0 1551 chr4 110448493 110448493 1 + G A COAD 110448493 - 110448473 110448513 41 GCAAACAAAGTGTATGTACTCTAATTCTCCGCTCACCTAAA GCAAACAAAGTGTATGTACTTTAATTCTCCGCTCACCTAAA Direct Gain 0 0.972276020050157 0 0.999993324279785 prediction 0.944552040100314 Functional Gain - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110448493 chr4:110448493 nonsynonymous SNV 0.111 5 21 hPsi_associated_SNPs_102591 0 0 0 0 0 Cytosol 0 0.438776042457258 0.99998664855957 0 hPsi_site_1551 iPseU_CNN:0.99998664855957;iRNA_PseU:0 1552 chr11 92538405 92538405 1 + C A rs62622785 92538405 - 92538385 92538425 41 ATTGAGAAAGTAAATGTCCTGTTCTTCTCTGTCTAGAGGCC ATTGAGAAAGTAAATGTCCTTTTCTTCTCTGTCTAGAGGCC Direct Gain 0 0.972258880189336 0 0.987835288047791 prediction 0.944517760378671 Functional Gain - FAT3 ENSG00000165323 CDS Human protein_coding chr11:92538405 chr11:92538405 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102592 0 0 0 0 0 nucleoplasm 0 0.43871859284717 0.975670576095582 0 hPsi_site_1552 iPseU_CNN:0.975670576095582;iRNA_PseU:0 1553 chr17 65029052 65029052 1 + C T rs1051774 65029052 + 65029032 65029072 41 AGCAAGGCAGCCGTGCTGTTCTAGTTCCTCTCCATCCGCCA AGCAAGGCAGCCGTGCTGTTTTAGTTCCTCTCCATCCGCCA Direct Gain 0 0.97223425066012 0 0.989319086074829 prediction 0.944468501320241 Functional Gain - CACNG4 ENSG00000265664 ncRNA_intronic Human antisense chr17:65029052 chr17:65029052 . . 0 21 hPsi_associated_SNPs_102593 0 0 0 0 0 Endoplasmic reticulum 0 0.438719311648382 0.978638172149658 0 hPsi_site_1553 iPseU_CNN:0.978638172149658;iRNA_PseU:0 1554 chr13 93879845 93879845 1 + G T LUSC 93879845 + 93879825 93879865 41 CCAAGGGATTCAGCCTGGCGGACATCCCCTACCAGGAGATC CCAAGGGATTCAGCCTGGCGTACATCCCCTACCAGGAGATC Direct Gain 0 0.972222763512697 0 0.999995410442352 prediction 0.944445527025394 Functional Gain - GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879845 chr13:93879845 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102594 0 0 1 0 1 Ribosome 0 0.438724704806538 0.999990820884704 0 hPsi_site_1554 iPseU_CNN:0.999990820884704;iRNA_PseU:0 1555 chr5 132440036 132440036 1 + G T UCEC 132440036 + 132440016 132440056 41 GACCAGTGGATGGACAAGGAGACAACCCAGGCCCCCAGGCT GACCAGTGGATGGACAAGGATACAACCCAGGCCCCCAGGCT Direct Gain 0 0.972217254935001 0 0.999909281730652 prediction 0.944434509870002 Functional Gain - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132440036 chr5:132440036 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102595 0 0 1 0 0 Cytosol 0 0.438718593000606 0.999818563461304 0 hPsi_site_1555 iPseU_CNN:0.999818563461304;iRNA_PseU:0 1556 chr14 33242896 33242896 1 + G T LUAD 33242896 + 33242876 33242916 41 TGTTGCAGTCCCTCTGTCGTGAAATCAAGCAACGACGTCGA TGTTGCAGTCCCTCTGTCGTTAAATCAAGCAACGACGTCGA Direct Gain 0 0.972216811090689 0 0.998137712478638 prediction 0.944433622181378 Functional Gain - AKAP6 ENSG00000151320 CDS Human protein_coding chr14:33242896 chr14:33242896 stopgain 0.982 1 21 hPsi_associated_SNPs_102596 0 0 0 0 1 cytosol 0 0.436648148415707 0.996275424957276 0 hPsi_site_1556 iPseU_CNN:0.996275424957276;iRNA_PseU:0 1557 chr15 89414627 89414627 1 + G A LUAD 89414627 - 89414607 89414647 41 GTACTTGTTCCAGCCCTCCTCACATACCTCCTGGTCTGCAA GTACTTGTTCCAGCCCTCCTTACATACCTCCTGGTCTGCAA Direct Gain 0 0.972212608392627 0 0.999385714530945 prediction 0.944425216785255 Functional Gain - ACAN ENSG00000157766 CDS Human protein_coding chr15:89414627 chr15:89414627 nonsynonymous SNV 0.984 3 21 hPsi_associated_SNPs_102597 0 0 0 0 0 exosome 0 0.438964392712374 0.99877142906189 0 hPsi_site_1557 iPseU_CNN:0.99877142906189;iRNA_PseU:0 1558 chr17 18025319 18025319 1 + G A LUSC 18025319 - 18025299 18025339 41 CCATGTGGCCCTGGTCTGGTCACACGCAGCCAGTGGGTATG CCATGTGGCCCTGGTCTGGTTACACGCAGCCAGTGGGTATG Direct Gain 0 0.97219752667438 0 0.0528388023376465 prediction 0.94439505334876 Functional Gain - MYO15A ENSG00000091536 CDS Human protein_coding chr17:18025319 chr17:18025319 nonsynonymous SNV 0.019 2 21 hPsi_associated_SNPs_102598 0 0 0 0 0 chromatin 0 0.438718592258203 0 0 hPsi_site_1558 iPseU_CNN:0;iRNA_PseU:0 1559 chr2 27456649 27456649 1 + C T KIRC 27456649 + 27456629 27456669 41 TCCAAAGAGCATCCCGTGGTCATCTCCAAGTTCATCCAGGA TCCAAAGAGCATCCCGTGGTTATCTCCAAGTTCATCCAGGA Direct Gain 0 0.972194047530262 0 0.991536974906921 prediction 0.944388095060523 Functional Gain - CAD ENSG00000084774 CDS Human protein_coding chr2:27456649 chr2:27456649 synonymous SNV . 0 21 hPsi_associated_SNPs_102599 0 0 0 0 1 Exosome 0 0.438806443282984 0.983073949813842 0 hPsi_site_1559 iPseU_CNN:0.983073949813842;iRNA_PseU:0 1560 chr22 51237433 51237433 1 + G A OV 51237433 - 51237413 51237453 41 GACCTTGGCCACATCACTGTCATAGAGCTTCTTCACAGCCT GACCTTGGCCACATCACTGTTATAGAGCTTCTTCACAGCCT Direct Gain 0 0.9721923487623 0 0.950747072696686 prediction 0.9443846975246 Functional Gain - RPL23AP82 ENSG00000184319 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:51237433 chr22:51237433 . . 0 21 hPsi_associated_SNPs_102600 0 0 0 0 0 unknown 0 0.438713465501641 0.901494145393372 0 hPsi_site_1560 iPseU_CNN:0.901494145393372;iRNA_PseU:0 1561 chr17 74729645 74729645 1 + G A BLCA 74729645 - 74729625 74729665 41 AGAGGAATGTGGACACATTTCATATCCCATTTGTAGAGTAA AGAGGAATGTGGACACATTTTATATCCCATTTGTAGAGTAA Direct Gain 0 0.972190922744481 0 0.0255537629127502 prediction 0.944381845488963 Functional Gain - METTL23 ENSG00000181038 CDS Human protein_coding chr17:74729645 chr17:74729645 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102601 0 0 1 0 0 Ribosome 0 0.438605734091253 0 0 hPsi_site_1561 iPseU_CNN:0;iRNA_PseU:0 1562 chr19 54481477 54481477 1 + C A UCEC 54481477 - 54481457 54481497 41 GGACCCCCACGTACGGAGTAGATACTCCGCGCTGTCGTGGT GGACCCCCACGTACGGAGTATATACTCCGCGCTGTCGTGGT Direct Gain 0 0.972172340369176 0 0.999838352203369 prediction 0.944344680738352 Functional Gain - CACNG8 ENSG00000142408 CDS Human protein_coding chr19:54481477 chr19:54481477 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_102602 0 0 0 0 0 exosome 0 0.438797790592662 0.999676704406738 0 hPsi_site_1562 iPseU_CNN:0.999676704406738;iRNA_PseU:0 1563 chr10 97916707 97916707 1 + G A STAD 97916707 - 97916687 97916727 41 GGTGGAGAACTTACACTTTTCACATTGAAAATTACCATTAA GGTGGAGAACTTACACTTTTTACATTGAAAATTACCATTAA Direct Gain 0 0.97213754026705 0 0.999974966049194 prediction 0.944275080534099 Functional Gain - ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97916707 chr10:97916707 . 1.000 0 21 hPsi_associated_SNPs_102603 0 0 0 0 0 Cytosol 0 0.438790619901302 0.999949932098388 0 hPsi_site_1563 iPseU_CNN:0.999949932098388;iRNA_PseU:0 1564 chr3 119120994 119120994 1 + C T LUSC 119120994 + 119120974 119121014 41 GACAGCCCTAGCAAATCCGTCTTCACCAGCAGCCTCTTCCA GACAGCCCTAGCAAATCCGTTTTCACCAGCAGCCTCTTCCA Direct Gain 0 0.972116785348016 0 0.999999761581421 prediction 0.944233570696033 Functional Gain - ARHGAP31 ENSG00000031081 CDS Human protein_coding chr3:119120994 chr3:119120994 synonymous SNV . 0 21 hPsi_associated_SNPs_102604 0 0 0 0 0 cytosol 0 0.44170315334012 0.999999523162842 0 hPsi_site_1564 iPseU_CNN:0.999999523162842;iRNA_PseU:0 1565 chr6 32714117 32714117 1 + C T SKCM 32714117 + 32714097 32714137 41 ATTGTGGTGGGCACTGTCTTCATCATCCAAGGCCTGCGTTC ATTGTGGTGGGCACTGTCTTTATCATCCAAGGCCTGCGTTC Direct Gain 0 0.972112617587188 0 0.899790167808533 prediction 0.944225235174375 Functional Gain - HLA-DQA2 ENSG00000237541 CDS Human protein_coding chr6:32714117 chr6:32714117 synonymous SNV . 0 21 hPsi_associated_SNPs_102605 0 0 0 0 1 exosome 0 0.438456410255171 0.799580335617066 0 hPsi_site_1565 iPseU_CNN:0.799580335617066;iRNA_PseU:0 1566 chr14 20813262 20813262 1 + C T rs375984083 20813262 + 20813242 20813282 41 AGATGGTATGCCAGGAAGGTCATGGGCCAGCAAAAGGGTCT AGATGGTATGCCAGGAAGGTTATGGGCCAGCAAAAGGGTCT Direct Gain 0 0.972112068227005 0 0.99997478723526 prediction 0.94422413645401 Functional Gain - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20813262 chr14:20813262 nonsynonymous SNV 0.089 0 21 hPsi_associated_SNPs_102606 0 0 1 0 1 Cytosol 0 0.438719966071233 0.99994957447052 0 hPsi_site_1566 iPseU_CNN:0.99994957447052;iRNA_PseU:0 1567 chr20 9496746 9496746 1 + C A LUAD 9496746 - 9496726 9496766 41 CATTTTGAGTGCATATGCGCGATCCACCCAGAACACTTGCA CATTTTGAGTGCATATGCGCTATCCACCCAGAACACTTGCA Direct Gain 0 0.972096614230389 0 0.741531014442444 prediction 0.944193228460778 Functional Gain - LAMP5 ENSG00000125869 CDS Human protein_coding chr20:9496746 chr20:9496746 nonsynonymous SNV 0.747 1 21 hPsi_associated_SNPs_102607 0 0 0 0 0 exosome 0 0.438493987956543 0.483062028884888 0 hPsi_site_1567 iPseU_CNN:0.483062028884888;iRNA_PseU:0 1568 chr12 69756643 69756643 1 + C T SKCM 69756643 + 69756623 69756663 41 AGAAAAGAGAAGAAGATGGGCACACTCATCAGTGGACAGTA AGAAAAGAGAAGAAGATGGGTACACTCATCAGTGGACAGTA Direct Gain 0 0.972076944565546 0 0.993865609169006 prediction 0.944153889131093 Functional Gain - YEATS4 ENSG00000127337 CDS Human protein_coding chr12:69756643 chr12:69756643 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_102608 0 0 1 0 1 Ribosome 0 0.438718804192365 0.987731218338012 0 hPsi_site_1568 iPseU_CNN:0.987731218338012;iRNA_PseU:0 1569 chr3 53835137 53835137 1 + G T COAD 53835137 + 53835117 53835157 41 TCATGTTAATAGTGATAGGAGAGATTCCCTTCAGCAGACCA TCATGTTAATAGTGATAGGATAGATTCCCTTCAGCAGACCA Direct Gain 0 0.972057174344505 0 0.999921321868896 prediction 0.944114348689009 Functional Gain - CACNA1D ENSG00000157388 CDS Human protein_coding chr3:53835137 chr3:53835137 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102609 0 0 0 0 1 Endoplasmic reticulum 0 0.438816335947262 0.999842643737792 0 hPsi_site_1569 iPseU_CNN:0.999842643737792;iRNA_PseU:0 1570 chr15 91438717 91438717 1 + G A LUSC 91438717 - 91438697 91438737 41 GCTGGGCCGCTGCCCAGGCTCATAGGCCCAGCACTGCTCCA GCTGGGCCGCTGCCCAGGCTTATAGGCCCAGCACTGCTCCA Direct Gain 0 0.972053000539081 0 0.980847835540771 prediction 0.944106001078162 Functional Gain - FES ENSG00000182511 CDS Human protein_coding chr15:91438717 chr15:91438717 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_102610 0 0 0 0 0 cytosol 0 0.438718628264762 0.961695671081542 0 hPsi_site_1570 iPseU_CNN:0.961695671081542;iRNA_PseU:0 1571 chr7 127235387 127235387 1 + G A UCEC 127235387 - 127235367 127235407 41 ACCACGGCCTGTGTCTCATGCTCATTGCTCACCAAGATCTC ACCACGGCCTGTGTCTCATGTTCATTGCTCACCAAGATCTC Direct Gain 0 0.97205258897872 0 0.914944887161255 prediction 0.94410517795744 Functional Gain - FSCN3 ENSG00000106328 CDS Human protein_coding chr7:127235387 chr7:127235387 synonymous SNV . 0 21 hPsi_associated_SNPs_102611 0 0 0 0 0 exosome 0 0.435173031070965 0.82988977432251 0 hPsi_site_1571 iPseU_CNN:0.82988977432251;iRNA_PseU:0 1572 chr22 32352768 32352768 1 + G A GBM 32352768 - 32352748 32352788 41 GAAGGATCTTCAGTTGCCTTCTCCTGCTTCTTCATCCTGCT GAAGGATCTTCAGTTGCCTTTTCCTGCTTCTTCATCCTGCT Direct Gain 0 0.972038004321612 0 0.00107872486114502 prediction 0.944076008643224 Functional Gain - YWHAH ENSG00000128245 CDS Human protein_coding chr22:32352768 chr22:32352768 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102612 0 0 0 0 0 Ribosome 0 0.438698474655673 0 0 hPsi_site_1572 iPseU_CNN:0;iRNA_PseU:0 1573 chr14 65008467 65008467 1 + C T LIHC 65008467 + 65008447 65008487 41 GTGGACTTCTATACGTCCATCACGCGCGCCCGCTTCGAGGA GTGGACTTCTATACGTCCATTACGCGCGCCCGCTTCGAGGA Direct Gain 0 0.972018457305853 0 0.965725064277649 prediction 0.944036914611707 Functional Gain - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65008467 chr14:65008467 synonymous SNV . 0 21 hPsi_associated_SNPs_102613 0 0 0 0 0 Cytosol 0 0.438715348063595 0.931450128555298 0 hPsi_site_1573 iPseU_CNN:0.931450128555298;iRNA_PseU:0 1574 chr5 153030042 153030042 1 + G A SKCM 153030042 - 153030022 153030062 41 AGCATTGAGGCGTTCTGATTCACAGTCCACCACCACCAGCC AGCATTGAGGCGTTCTGATTTACAGTCCACCACCACCAGCC Direct Gain 0 0.972014478482077 0 0.999729633331299 prediction 0.944028956964155 Functional Gain - GRIA1 ENSG00000155511 CDS Human protein_coding chr5:153030042 chr5:153030042 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102614 0 0 0 0 0 exosome 0 0.438718151502996 0.999459266662598 0 hPsi_site_1574 iPseU_CNN:0.999459266662598;iRNA_PseU:0 1575 chr19 9204748 9204748 1 + G T UCEC 9204748 + 9204728 9204768 41 AAGGAGAAAGCTTCTGCGGTGATGTACACAGCAGTCACCCC AAGGAGAAAGCTTCTGCGGTTATGTACACAGCAGTCACCCC Direct Gain 0 0.972014109784003 0 0.998498201370239 prediction 0.944028219568005 Functional Gain - OR1M1 ENSG00000170929 CDS Human protein_coding chr19:9204748 chr19:9204748 synonymous SNV . 0 21 hPsi_associated_SNPs_102615 0 0 0 0 0 unknown 0 0.438412721898854 0.996996402740478 0 hPsi_site_1575 iPseU_CNN:0.996996402740478;iRNA_PseU:0 1576 chr19 57840549 57840549 1 + G A LUSC 57840549 - 57840529 57840569 41 TTGACTGAAGTCTGTGCAGTCATAAAAGGTCTTCCCACATC TTGACTGAAGTCTGTGCAGTTATAAAAGGTCTTCCCACATC Direct Gain 0 0.971996688802134 0 0.99975448846817 prediction 0.943993377604268 Functional Gain - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57840549 chr19:57840549 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102616 0 0 0 0 0 Nucleus 0 0.438727393029264 0.99950897693634 0 hPsi_site_1576 iPseU_CNN:0.99950897693634;iRNA_PseU:0 1577 chr2 160605023 160605023 1 + G A LUAD 160605023 - 160605003 160605043 41 GGTAGGTATCCTTGAAGATTCATCTCTTCCCTCTCGCCTCC GGTAGGTATCCTTGAAGATTTATCTCTTCCCTCTCGCCTCC Direct Gain 0 0.971995421034884 0 0.452068746089935 prediction 0.943990842069768 Functional Gain - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160605023 chr2:160605023 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102617 0 0 0 0 0 Cytosol 0 0.438718598525876 0 0 hPsi_site_1577 iPseU_CNN:0;iRNA_PseU:0 1578 chr5 78379191 78379191 1 + C A LGG 78379191 - 78379171 78379211 41 GCACCTGAGCTTACCAAAGGGATATTCTGGGAGATCCACAA GCACCTGAGCTTACCAAAGGTATATTCTGGGAGATCCACAA Direct Gain 0 0.971987832342874 0 0.999490082263947 prediction 0.943975664685747 Functional Gain - BHMT2 ENSG00000132840 CDS Human protein_coding chr5:78379191 chr5:78379191 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102618 0 0 0 0 0 cytosol 0 0.43871843406233 0.998980164527894 0 hPsi_site_1578 iPseU_CNN:0.998980164527894;iRNA_PseU:0 1579 chr9 140173372 140173372 1 + C T HNSC 140173372 + 140173352 140173392 41 CTGGACCAGCCAAAGTTCTTCACCTTCGACAGCCCCGCGGA CTGGACCAGCCAAAGTTCTTTACCTTCGACAGCCCCGCGGA Direct Gain 0 0.971949464606156 0 0.999999940395355 prediction 0.943898929212312 Functional Gain - TOR4A ENSG00000198113 CDS Human protein_coding chr9:140173372 chr9:140173372 synonymous SNV . 0 21 hPsi_associated_SNPs_102619 0 0 1 0 0 Ribosome 0 0.43868653746739 0.99999988079071 0 hPsi_site_1579 iPseU_CNN:0.99999988079071;iRNA_PseU:0 1580 chr1 111016652 111016652 1 + G A rs61740432 111016652 - 111016632 111016672 41 GGATGAGCTGGTATATTGATCATGTTCTCTGATTTTCCATA GGATGAGCTGGTATATTGATTATGTTCTCTGATTTTCCATA Direct Gain 0 0.971906935888655 0 0.991864800453186 prediction 0.943813871777309 Functional Gain - PROK1;CYMP ENSG00000143125;ENSG00000240194 intergenic Human other chr1:111016652 chr1:111016652 . . 0 21 hPsi_associated_SNPs_102620 0 0 0 0 0 unknown 0 0.452135289226665 0.983729600906372 0 hPsi_site_1580 iPseU_CNN:0.983729600906372;iRNA_PseU:0 1581 chr20 44639608 44639608 1 + C T COAD 44639608 + 44639588 44639628 41 GGAAGGACGGGCTCCTGGCACACGCCTTTCCTCCTGGCCCC GGAAGGACGGGCTCCTGGCATACGCCTTTCCTCCTGGCCCC Direct Gain 0 0.971901500907132 0 0.999997973442078 prediction 0.943803001814264 Functional Gain - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44639608 chr20:44639608 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102621 0 0 0 0 2 Endoplasmic reticulum 0 0.438718592934841 0.999995946884156 0 hPsi_site_1581 iPseU_CNN:0.999995946884156;iRNA_PseU:0 1582 chr1 15895448 15895448 1 + G A rs561299662 15895448 - 15895428 15895468 41 ACATGTCAACGGCTCAAAGTCATCACAGTACTTCTCGCTGT ACATGTCAACGGCTCAAAGTTATCACAGTACTTCTCGCTGT Direct Gain 0 0.971893085945274 0 0.998761713504791 prediction 0.943786171890549 Functional Gain - DNAJC16 ENSG00000116138 UTR3 Human protein_coding chr1:15895448 chr1:15895448 . . 0 21 hPsi_associated_SNPs_102622 0 0 0 0 0 Endoplasmic reticulum 0 0.414971838481892 0.997523427009582 0 hPsi_site_1582 iPseU_CNN:0.997523427009582;iRNA_PseU:0 1583 chrX 106172095 106172095 1 + C T COAD 106172095 + 106172075 106172115 41 GGAGCTCTCCAAGGCCTGGTCAACCTCCCAAAGTCAAGAGT GGAGCTCTCCAAGGCCTGGTTAACCTCCCAAAGTCAAGAGT Direct Gain 0 0.97189244120832 0 0.998385548591614 prediction 0.94378488241664 Functional Gain - CLDN2 ENSG00000165376 CDS Human protein_coding chrX:106172095 chrX:106172095 stopgain 0.809 0 21 hPsi_associated_SNPs_102623 0 0 0 0 0 Ribosome 0 0.438718592994882 0.996771097183228 0 hPsi_site_1583 iPseU_CNN:0.996771097183228;iRNA_PseU:0 1584 chr14 20943076 20943076 1 + C T SKCM 20943076 + 20943056 20943096 41 ACCTACCTGGTTTCAGTGGTCAGAACCCTCTCAGAGGGCCC ACCTACCTGGTTTCAGTGGTTAGAACCCTCTCAGAGGGCCC Direct Gain 0 0.971890299514837 0 0.992344975471497 prediction 0.943780599029674 Functional Gain - PNP ENSG00000198805 CDS Human protein_coding chr14:20943076 chr14:20943076 stopgain 0.836 0 21 hPsi_associated_SNPs_102624 0 0 1 0 1 Ribosome 0 0.438718087448455 0.984689950942994 0 hPsi_site_1584 iPseU_CNN:0.984689950942994;iRNA_PseU:0 1585 chr6 87970002 87970002 1 + G A ESCA 87970002 - 87969982 87970022 41 AGATTTACACTCTAACTGGTCACATGGAAACTTCCCAACAT AGATTTACACTCTAACTGGTTACATGGAAACTTCCCAACAT Direct Gain 0 0.971888441339754 0 0.999660611152649 prediction 0.943776882679508 Functional Gain - ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87970002 chr6:87970002 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102625 0 0 0 0 0 Cytosol 0 0.438721084443759 0.999321222305298 0 hPsi_site_1585 iPseU_CNN:0.999321222305298;iRNA_PseU:0 1586 chr21 31768620 31768620 1 + G T KIRP 31768620 + 31768600 31768640 41 TGCCAGACATCCTATGTGGAGTCCAGCCCCTGCCAGACCTC TGCCAGACATCCTATGTGGATTCCAGCCCCTGCCAGACCTC Direct Gain 0 0.971862586694648 0 0.471126407384872 prediction 0.943725173389295 Functional Gain - KRTAP13-1 ENSG00000198390 CDS Human protein_coding chr21:31768620 chr21:31768620 nonsynonymous SNV 0.023 0 21 hPsi_associated_SNPs_102626 0 0 0 0 0 unknown 0 0.438718433036797 0 0 hPsi_site_1586 iPseU_CNN:0;iRNA_PseU:0 1587 chr22 21357006 21357006 1 + C T rs4822808 21357006 + 21356986 21357026 41 GGCGCGATCTCGGCTCACTGCAAACTCCGCCTCCCGGGTTC GGCGCGATCTCGGCTCACTGTAAACTCCGCCTCCCGGGTTC Direct Gain 0 0.971841535774957 0 0.999983847141266 prediction 0.943683071549913 Functional Gain - THAP7-AS1 ENSG00000230513 ncRNA_exonic Human antisense chr22:21357006 chr22:21357006 . . 0 21 hPsi_associated_SNPs_102627 0 0 0 0 0 unknown 0 0.438718062138655 0.999967694282532 0 hPsi_site_1587 iPseU_CNN:0.999967694282532;iRNA_PseU:0 1588 chr1 160718039 160718039 1 + G T STAD 160718039 + 160718019 160718059 41 GGTTCCGTTGGTGGGGCCGTGACTTTCCCCCTGAAGTCCAA GGTTCCGTTGGTGGGGCCGTTACTTTCCCCCTGAAGTCCAA Direct Gain 0 0.971835373038261 0 0.999984860420227 prediction 0.943670746076522 Functional Gain - SLAMF7 ENSG00000026751 CDS Human protein_coding chr1:160718039 chr1:160718039 synonymous SNV . 0 21 hPsi_associated_SNPs_102628 0 0 0 0 0 exosome 0 0.438717850991803 0.999969720840454 0 hPsi_site_1588 iPseU_CNN:0.999969720840454;iRNA_PseU:0 1589 chr16 67576462 67576462 1 + C T BLCA 67576462 + 67576442 67576482 41 ACAGGCCCTACCCTCAATATCATAGGCCCAGTCCAGACTAC ACAGGCCCTACCCTCAATATTATAGGCCCAGTCCAGACTAC Direct Gain 0 0.971817961704089 0 0.998541831970215 prediction 0.943635923408177 Functional Gain - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67576462 chr16:67576462 synonymous SNV . 0 21 hPsi_associated_SNPs_102629 0 0 1 0 0 unknown 0 0.4387185953875 0.99708366394043 0 hPsi_site_1589 iPseU_CNN:0.99708366394043;iRNA_PseU:0 1590 chr12 40876263 40876263 1 + C A rs73100424 40876263 - 40876243 40876283 41 TTGTCTGAGTCACTGTAGGTGATTGCCGAGGTGTCACTGTC TTGTCTGAGTCACTGTAGGTTATTGCCGAGGTGTCACTGTC Direct Gain 0 0.971810578151857 0 0.999973177909851 prediction 0.943621156303714 Functional Gain - MUC19 ENSG00000205592 CDS Human processed_transcript chr12:40876263 chr12:40876263 stopgain . 0 21 hPsi_associated_SNPs_102630 0 0 0 0 0 unknown 0 0.438479902821838 0.999946355819702 0 hPsi_site_1590 iPseU_CNN:0.999946355819702;iRNA_PseU:0 1591 chr9 2719047 2719047 1 + G A rs139581747 2719047 - 2719027 2719067 41 GTAGTGAAGTTGGTGCTGGGCACATCGTGCTCCACAGAGTA GTAGTGAAGTTGGTGCTGGGTACATCGTGCTCCACAGAGTA Direct Gain 0 0.971795923689067 0 0.999560713768005 prediction 0.943591847378135 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2719047 chr9:2719047 synonymous SNV . 0 21 hPsi_associated_SNPs_102631 0 0 1 0 0 insoluble cytoplasm 0 0.438731084954218 0.99912142753601 0 hPsi_site_1591 iPseU_CNN:0.99912142753601;iRNA_PseU:0 1592 chr11 22770718 22770718 1 + G A SKCM 22770718 - 22770698 22770738 41 AGGGGCAGAAAGTGTTTCTTCTTGTTCAATCTCTTTTTCCA AGGGGCAGAAAGTGTTTCTTTTTGTTCAATCTCTTTTTCCA Direct Gain 0 0.97179592128288 0 0.347432792186737 prediction 0.94359184256576 Functional Gain - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22770718 chr11:22770718 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102632 0 0 0 0 0 Endoplasmic reticulum 0 0.438714617092824 0 0 hPsi_site_1592 iPseU_CNN:0;iRNA_PseU:0 1593 chr9 5720204 5720204 1 + C A UCEC 5720204 - 5720184 5720224 41 ATCAGAAGTAGCAACCAGGAGATCTTCCAACACAGACTGCA ATCAGAAGTAGCAACCAGGATATCTTCCAACACAGACTGCA Direct Gain 0 0.971787502734252 0 0.970760583877563 prediction 0.943575005468504 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5720204 chr9:5720204 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102633 0 0 0 0 0 Nucleus 0 0.438889812309424 0.941521167755126 0 hPsi_site_1593 iPseU_CNN:0.941521167755126;iRNA_PseU:0 1594 chr1 233802610 233802610 1 + G A SKCM 233802610 - 233802590 233802630 41 GGATTCCAGGAAGTTCCAGTCATCCTCCAGGACTGAGAAGA GGATTCCAGGAAGTTCCAGTTATCCTCCAGGACTGAGAAGA Direct Gain 0 0.971777468958586 0 0.981628894805908 prediction 0.943554937917173 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802610 chr1:233802610 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_102634 0 0 0 0 0 Endoplasmic reticulum 0 0.438707705114296 0.963257789611816 0 hPsi_site_1594 iPseU_CNN:0.963257789611816;iRNA_PseU:0 1595 chr7 141618891 141618891 1 + C T LUAD 141618891 + 141618871 141618911 41 TCTGCCCTGGAGATCCTGGTCACAACCATAATCGTCCCCGT TCTGCCCTGGAGATCCTGGTTACAACCATAATCGTCCCCGT Direct Gain 0 0.971776279181075 0 0.999385476112366 prediction 0.94355255836215 Functional Gain - OR9A4 ENSG00000258083 CDS Human protein_coding chr7:141618891 chr7:141618891 synonymous SNV . 0 21 hPsi_associated_SNPs_102635 0 0 0 0 0 unknown 0 0.438718594306182 0.998770952224732 0 hPsi_site_1595 iPseU_CNN:0.998770952224732;iRNA_PseU:0 1596 chr14 65009353 65009353 1 + G A BLCA 65009353 - 65009333 65009373 41 GAGCTCTTTCTGCTTGTGTTCATACTCATCTTTCTCTGCCA GAGCTCTTTCTGCTTGTGTTTATACTCATCTTTCTCTGCCA Direct Gain 0 0.971775983454871 0 0.997680425643921 prediction 0.943551966909743 Functional Gain - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65009353 chr14:65009353 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_102636 0 0 0 0 0 Cytosol 0 0.439303591699881 0.995360851287842 0 hPsi_site_1596 iPseU_CNN:0.995360851287842;iRNA_PseU:0 1597 chr20 3783805 3783805 1 + G A BLCA 3783805 - 3783785 3783825 41 GGGTATCTGCAGTCTACAATCACAAACTTATCCACGATGTT GGGTATCTGCAGTCTACAATTACAAACTTATCCACGATGTT Direct Gain 0 0.971761715639343 0 0.393627226352692 prediction 0.943523431278687 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3783805 chr20:3783805 synonymous SNV . 0 21 hPsi_associated_SNPs_102637 0 0 0 0 0 Ribosome 0 0.438779593414899 0 0 hPsi_site_1597 iPseU_CNN:0;iRNA_PseU:0 1598 chr19 50720898 50720898 1 + C T THCA 50720898 + 50720878 50720918 41 TCCGGCCTTTTCTGTGTGGTCATCAACCCGTACAAGCAGCT TCCGGCCTTTTCTGTGTGGTTATCAACCCGTACAAGCAGCT Direct Gain 0 0.97175804674264 0 0.99780136346817 prediction 0.94351609348528 Functional Gain - MYH14 ENSG00000105357 CDS Human protein_coding chr19:50720898 chr19:50720898 synonymous SNV . 0 21 hPsi_associated_SNPs_102638 0 0 1 0 1 cytosol 0 0.438379413402385 0.99560272693634 0 hPsi_site_1598 iPseU_CNN:0.99560272693634;iRNA_PseU:0 1599 chr22 21357280 21357280 1 + G T UCEC 21357280 + 21357260 21357300 41 AGATCCTCGCGGGCCTCGGAGAATTCCCCCACTGCCATGCC AGATCCTCGCGGGCCTCGGATAATTCCCCCACTGCCATGCC Direct Gain 0 0.971726575885842 0 0.999934911727905 prediction 0.943453151771684 Functional Gain - THAP7-AS1 ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21357280 chr22:21357280 . . 0 21 hPsi_associated_SNPs_102639 0 0 1 0 1 unknown 0 0.438718512772193 0.99986982345581 0 hPsi_site_1599 iPseU_CNN:0.99986982345581;iRNA_PseU:0 1600 chr1 28785655 28785655 1 + G A COAD 28785655 - 28785635 28785675 41 TTTGGTAGGAGGTGTTGTGTCTCCTGCTTCCACACTGTCCA TTTGGTAGGAGGTGTTGTGTTTCCTGCTTCCACACTGTCCA Direct Gain 0 0.971725967471655 0 0.931357145309448 prediction 0.943451934943311 Functional Gain - PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28785655 chr1:28785655 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102640 0 0 0 0 0 Nucleus 0 0.439143062689689 0.862714290618896 0 hPsi_site_1600 iPseU_CNN:0.862714290618896;iRNA_PseU:0 1601 chrX 2573338 2573338 1 + C T rs59170330 2573338 + 2573318 2573358 41 GGGATCTGGTGCTTTTTCTTCATAGGGTTAGTCGCTTTCCC GGGATCTGGTGCTTTTTCTTTATAGGGTTAGTCGCTTTCCC Direct Gain 0 0.97171412193972 0 0.999992966651917 prediction 0.94342824387944 Functional Gain - CD99P1 ENSG00000223773 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:2573338 chrX:2573338 . . 0 21 hPsi_associated_SNPs_102641 0 0 0 0 0 unknown 0 0.438718565969864 0.999985933303834 0 hPsi_site_1601 iPseU_CNN:0.999985933303834;iRNA_PseU:0 1602 chrX 70320966 70320966 1 + G T LUAD 70320966 + 70320946 70320986 41 TCAGCAGTTATGCAGGGGGTGTCCCTCCCACCCTCAATGAA TCAGCAGTTATGCAGGGGGTTTCCCTCCCACCCTCAATGAA Direct Gain 0 0.971713203018145 0 0.581825256347656 prediction 0.943426406036291 Functional Gain - FOXO4 ENSG00000184481 CDS Human protein_coding chrX:70320966 chrX:70320966 nonsynonymous SNV 0.911 2 21 hPsi_associated_SNPs_102642 0 0 1 0 0 Cytosol 0 0.438718592995057 0.163650512695312 0 hPsi_site_1602 iPseU_CNN:0.163650512695312;iRNA_PseU:0 1603 chr20 47895492 47895492 1 + G A BLCA 47895492 - 47895472 47895512 41 GATGGGGAAAAAAGTGAAGTCATCATTTACACCAGCCAAGG GATGGGGAAAAAAGTGAAGTTATCATTTACACCAGCCAAGG Direct Gain 0 0.971699801268842 0 0.126751959323883 prediction 0.943399602537684 Functional Gain - SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895492 chr20:47895492 . . 0 21 hPsi_associated_SNPs_102643 0 0 0 0 0 unknown 0 0.438718667087032 0 0 hPsi_site_1603 iPseU_CNN:0;iRNA_PseU:0 1604 chr22 26423695 26423695 1 + G A rs572268264 26423695 - 26423675 26423715 41 CCAAGGCTGCAAGGTGAACTCTCATTCCCCCAAGAATAGCC CCAAGGCTGCAAGGTGAACTTTCATTCCCCCAAGAATAGCC Direct Gain 0 0.971688522284589 0 0.854596793651581 prediction 0.943377044569179 Functional Gain - MYO18B ENSG00000133454 UTR3 Human protein_coding chr22:26423695 chr22:26423695 . . 0 21 hPsi_associated_SNPs_102644 0 0 0 0 0 chromatin 0 0.438718593010774 0.709193587303162 0 hPsi_site_1604 iPseU_CNN:0.709193587303162;iRNA_PseU:0 1605 chr9 132641892 132641892 1 + C T SKCM 132641892 + 132641872 132641912 41 AACAGCAGGATTGCACAGGTCAAAGGAAGCGGCCATGTCCA AACAGCAGGATTGCACAGGTTAAAGGAAGCGGCCATGTCCA Direct Gain 0 0.971687725635948 0 0.930880069732666 prediction 0.943375451271896 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132641892 chr9:132641892 synonymous SNV . 0 21 hPsi_associated_SNPs_102645 0 0 1 0 1 chromatin 0 0.439458453076846 0.861760139465332 0 hPsi_site_1605 iPseU_CNN:0.861760139465332;iRNA_PseU:0 1606 chr3 140167449 140167449 1 + G T LUSC 140167449 + 140167429 140167469 41 GAGACGTGCGATGGAGCCGTGTCTTCCCTCCAGATCGTCAC GAGACGTGCGATGGAGCCGTTTCTTCCCTCCAGATCGTCAC Direct Gain 0 0.971686582464085 0 0.998379647731781 prediction 0.94337316492817 Functional Gain - CLSTN2 ENSG00000158258 CDS Human protein_coding chr3:140167449 chr3:140167449 synonymous SNV . 0 21 hPsi_associated_SNPs_102646 0 0 0 0 2 exosome 0 0.438718581052254 0.996759295463562 0 hPsi_site_1606 iPseU_CNN:0.996759295463562;iRNA_PseU:0 1607 chr6 46657276 46657276 1 + G A LUSC 46657276 - 46657256 46657296 41 GGCTGGGAGTGAAATCTCTTCATCTACTTCTTCAGCAGGAG GGCTGGGAGTGAAATCTCTTTATCTACTTCTTCAGCAGGAG Direct Gain 0 0.971686513758382 0 0.979928374290466 prediction 0.943373027516763 Functional Gain - TDRD6 ENSG00000180113 CDS Human protein_coding chr6:46657276 chr6:46657276 nonsynonymous SNV 0.060 0 21 hPsi_associated_SNPs_102647 0 0 0 0 0 Cytosol 0 0.438718592990542 0.959856748580932 0 hPsi_site_1607 iPseU_CNN:0.959856748580932;iRNA_PseU:0 1608 chr1 3328903 3328903 1 + G A rs200167919 3328903 - 3328883 3328923 41 TAGGGGAGCGAGCCCAGCTTCTTCTCCTGCATCCCCATGAA TAGGGGAGCGAGCCCAGCTTTTTCTCCTGCATCCCCATGAA Direct Gain 0 0.971625389610383 0 0.995819330215454 prediction 0.943250779220766 Functional Gain - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3328903 chr1:3328903 synonymous SNV . 0 21 hPsi_associated_SNPs_102648 1 0 0 0 0 Nucleus 0 0.438718592995154 0.991638660430908 0 hPsi_site_1608 iPseU_CNN:0.991638660430908;iRNA_PseU:0 1609 chr10 123844087 123844087 1 + C T SKCM 123844087 + 123844067 123844107 41 AGGAGCCATCTGGGAGGGGTCAGGATTGCAGCCCAAATGTC AGGAGCCATCTGGGAGGGGTTAGGATTGCAGCCCAAATGTC Direct Gain 0 0.971621404135785 0 0.999411821365356 prediction 0.94324280827157 Functional Gain - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123844087 chr10:123844087 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_102649 0 0 0 0 0 Cytoplasm 0 0.438757920849976 0.998823642730712 0 hPsi_site_1609 iPseU_CNN:0.998823642730712;iRNA_PseU:0 1610 chr17 79205426 79205426 1 + C A LUSC 79205426 - 79205406 79205446 41 GGTGAGGACTGTGACTCGGGGACCACGCGCCTTCCTGAGCC GGTGAGGACTGTGACTCGGGTACCACGCGCCTTCCTGAGCC Direct Gain 0 0.971608194739468 0 0.99996554851532 prediction 0.943216389478935 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205426 chr17:79205426 nonsynonymous SNV 0.004 4 21 hPsi_associated_SNPs_102650 0 0 1 0 0 chromatin 0 0.438703868388209 0.99993109703064 0 hPsi_site_1610 iPseU_CNN:0.99993109703064;iRNA_PseU:0 1611 chr6 28116554 28116554 1 + G A LUSC 28116554 - 28116534 28116574 41 TCCAAATCCTCTAATAGGGTCACCACCTCCTCTCCGTTCTC TCCAAATCCTCTAATAGGGTTACCACCTCCTCTCCGTTCTC Direct Gain 0 0.971607988938137 0 0.344890892505646 prediction 0.943215977876273 Functional Gain - ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28116554 chr6:28116554 synonymous SNV . 0 21 hPsi_associated_SNPs_102651 0 0 0 0 0 chromatin 0 0.438720205395513 0 0 hPsi_site_1611 iPseU_CNN:0;iRNA_PseU:0 1612 chr11 94884373 94884373 1 + C A rs521191 94884373 - 94884353 94884393 41 CAGGCGCCCGGCGTTAGCGGGATCCTCCCCGCGCACTGGTC CAGGCGCCCGGCGTTAGCGGTATCCTCCCCGCGCACTGGTC Direct Gain 0 0.971607738222228 0 0.999999463558197 prediction 0.943215476444457 Functional Gain - LOC101929295 ENSG00000245552 ncRNA_exonic Human antisense chr11:94884373 chr11:94884373 . . 0 21 hPsi_associated_SNPs_102652 0 0 0 0 0 unknown 0 0.439092842688061 0.999998927116394 0 hPsi_site_1612 iPseU_CNN:0.999998927116394;iRNA_PseU:0 1613 chr6 142741106 142741106 1 + G A BLCA 142741106 - 142741086 142741126 41 GCGCAGGTTCCTTAACACTTCTTCTCTCAGGGTCCGGTTGC GCGCAGGTTCCTTAACACTTTTTCTCTCAGGGTCCGGTTGC Direct Gain 0 0.971589384944531 0 0.886392116546631 prediction 0.943178769889061 Functional Gain - ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142741106 chr6:142741106 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_102653 0 0 0 0 0 Ribosome 0 0.43872994606614 0.772784233093262 0 hPsi_site_1613 iPseU_CNN:0.772784233093262;iRNA_PseU:0 1614 chr11 563489 563489 1 + G A rs201007942 563489 - 563469 563509 41 TGCCCCAGGGGGAGGTGGGGCACAGACATACCCTCGGGGCC TGCCCCAGGGGGAGGTGGGGTACAGACATACCCTCGGGGCC Direct Gain 0 0.971589085386039 0 0.99999725818634 prediction 0.943178170772078 Functional Gain - RASSF7 ENSG00000099849 UTR3 Human protein_coding chr11:563489 chr11:563489 . . 0 21 hPsi_associated_SNPs_102654 0 0 0 0 0 exosome 0 0.453490700227942 0.99999451637268 0 hPsi_site_1614 iPseU_CNN:0.99999451637268;iRNA_PseU:0 1615 chr4 156643246 156643246 1 + G A HNSC 156643246 - 156643226 156643266 41 CCAAAAAGACAGTAACGGGGCATTTTAACTCCAACGACGCC CCAAAAAGACAGTAACGGGGTATTTTAACTCCAACGACGCC Direct Gain 0 0.971579041917433 0 0.983813285827637 prediction 0.943158083834865 Functional Gain - GUCY1A3 ENSG00000164116 CDS Human protein_coding chr4:156643246 chr4:156643246 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_102655 0 0 0 0 0 exosome 0 0.438718592995102 0.967626571655274 0 hPsi_site_1615 iPseU_CNN:0.967626571655274;iRNA_PseU:0 1616 chr2 228124545 228124545 1 + G A HNSC 228124545 - 228124525 228124565 41 TGGTGGGCCTGGAGTGCCTTCATCTCCCTTTTCCTGGTATG TGGTGGGCCTGGAGTGCCTTTATCTCCCTTTTCCTGGTATG Direct Gain 0 0.971569795428101 0 0.555840253829956 prediction 0.943139590856202 Functional Gain - COL4A3 ENSG00000169031 CDS Human protein_coding chr2:228124545 chr2:228124545 nonsynonymous SNV 0.205 1 21 hPsi_associated_SNPs_102656 0 0 0 0 0 nucleus 0 0.43871859257567 0.111680507659912 0 hPsi_site_1616 iPseU_CNN:0.111680507659912;iRNA_PseU:0 1617 chr6 25529103 25529103 1 + C A UCEC 25529103 - 25529083 25529123 41 ACCTGCTGGGTGGTGCTGGTGACAATACCCTGCTGCAGGCG ACCTGCTGGGTGGTGCTGGTTACAATACCCTGCTGCAGGCG Direct Gain 0 0.971564642102526 0 0.999994039535522 prediction 0.943129284205053 Functional Gain - CARMIL1 ENSG00000079691 CDS Human protein_coding chr6:25529103 chr6:25529103 synonymous SNV . 0 21 hPsi_associated_SNPs_102657 0 0 0 0 0 unknown 0 0.438727872557214 0.999988079071044 0 hPsi_site_1617 iPseU_CNN:0.999988079071044;iRNA_PseU:0 1618 chr1 12266986 12266986 1 + C T KIRP 12266986 + 12266966 12267006 41 GGAGGAATGTGCCTTTCGGTCACAGCTGGAGACGCCAGAGA GGAGGAATGTGCCTTTCGGTTACAGCTGGAGACGCCAGAGA Direct Gain 0 0.971564080608614 0 0.996451020240784 prediction 0.943128161217229 Functional Gain - TNFRSF1B ENSG00000028137 CDS Human protein_coding chr1:12266986 chr1:12266986 nonsynonymous SNV 0.001 2 21 hPsi_associated_SNPs_102658 0 0 1 0 0 Ribosome 0 0.438728570028776 0.992902040481568 0 hPsi_site_1618 iPseU_CNN:0.992902040481568;iRNA_PseU:0 1619 chr17 48944306 48944306 1 + G T rs571942326 48944306 + 48944286 48944326 41 GTAGAGAAAGGGCAAACTGTGACCGGGACTTGTGCACCCGA GTAGAGAAAGGGCAAACTGTTACCGGGACTTGTGCACCCGA Direct Gain 0 0.971559139648876 0 0.99999725818634 prediction 0.943118279297753 Functional Gain - TOB1-AS1 ENSG00000229980 ncRNA_exonic Human processed_transcript chr17:48944306 chr17:48944306 . . 0 21 hPsi_associated_SNPs_102659 0 0 0 3 0 unknown 0 0.438731270022154 0.99999451637268 0 hPsi_site_1619 iPseU_CNN:0.99999451637268;iRNA_PseU:0 1620 chr3 195955073 195955073 1 + C A LUSC 195955073 - 195955053 195955093 41 GTGTGGACCATCATCGGGGTGTCCCTCAGCGTCCTCAGCAC GTGTGGACCATCATCGGGGTTTCCCTCAGCGTCCTCAGCAC Direct Gain 0 0.971551253288842 0 0.859805464744568 prediction 0.943102506577684 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955073 chr3:195955073 nonsynonymous SNV 0.940 2 21 hPsi_associated_SNPs_102660 0 0 0 0 0 exosome 0 0.438071176004415 0.719610929489136 0 hPsi_site_1620 iPseU_CNN:0.719610929489136;iRNA_PseU:0 1621 chr1 221055621 221055621 1 + G A COAD 221055621 - 221055601 221055641 41 TTGGTCACGTACTTCTGAATCTCAAACCTTTTCTCCAGGCC TTGGTCACGTACTTCTGAATTTCAAACCTTTTCTCCAGGCC Direct Gain 0 0.971542818594218 0 0.75225704908371 prediction 0.943085637188436 Functional Gain - HLX ENSG00000136630 CDS Human protein_coding chr1:221055621 chr1:221055621 synonymous SNV . 0 21 hPsi_associated_SNPs_102661 0 0 0 0 0 exosome 0 0.438718831388295 0.50451409816742 0 hPsi_site_1621 iPseU_CNN:0.50451409816742;iRNA_PseU:0 1622 chr6 116600829 116600829 1 + C A UCEC 116600829 - 116600809 116600849 41 CCGGGTGAGGGAGGCTCGGAGACCGTCGCGCTCCCGCCTCC CCGGGTGAGGGAGGCTCGGATACCGTCGCGCTCCCGCCTCC Direct Gain 0 0.971540236106413 0 0.999985039234161 prediction 0.943080472212825 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600829 chr6:116600829 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102662 0 0 1 0 0 Ribosome 0 0.438367968063022 0.999970078468322 0 hPsi_site_1622 iPseU_CNN:0.999970078468322;iRNA_PseU:0 1623 chr22 44583673 44583673 1 + C A UCEC 44583673 - 44583653 44583693 41 TCGGGGAGAAGAGTGGCATTGATCCACTCCATCAACACCTG TCGGGGAGAAGAGTGGCATTTATCCACTCCATCAACACCTG Direct Gain 0 0.971526337457524 0 0.997749090194702 prediction 0.943052674915047 Functional Gain - PARVG ENSG00000138964 CDS Human protein_coding chr22:44583673 chr22:44583673 synonymous SNV . 0 21 hPsi_associated_SNPs_102663 0 0 0 0 0 exosome 0 0.43871887548423 0.995498180389404 0 hPsi_site_1623 iPseU_CNN:0.995498180389404;iRNA_PseU:0 1624 chr12 4465343 4465343 1 + G T rs186370160 4465343 + 4465323 4465363 41 GGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCA GGAAGATGGCAGCACTGGCTTTTGGGCCATTTGAAGAAGCA Direct Gain 0 0.971511409178865 0 0.753431081771851 prediction 0.943022818357731 Functional Gain - TIGAR ENSG00000078237;ENSG00000118972 intergenic Human other chr12:4465343 chr12:4465343 . . 0 21 hPsi_associated_SNPs_102664 0 0 1 0 0 Nucleus 0 0.438718586358943 0.506862163543702 0 hPsi_site_1624 iPseU_CNN:0.506862163543702;iRNA_PseU:0 1625 chr3 129992123 129992123 1 + G A rs61733464 129992123 - 129992103 129992143 41 TATTGGGACACACCAAGCCTCACATTCTTCCTTGGTTTCAA TATTGGGACACACCAAGCCTTACATTCTTCCTTGGTTTCAA Direct Gain 0 0.971505752390653 0 0.878645718097687 prediction 0.943011504781305 Functional Gain - COL6A4P2 ENSG00000228252;ENSG00000228252 upstream;downstream Human other chr3:129992123 chr3:129992123 . . 0 21 hPsi_associated_SNPs_102665 0 0 0 0 0 unknown 0 0.43871859219225 0.757291436195374 0 hPsi_site_1625 iPseU_CNN:0.757291436195374;iRNA_PseU:0 1626 chr17 53851141 53851141 1 + G T SARC 53851141 + 53851121 53851161 41 GAAGGGAGGAAGATCCATGTGATCCTGGCCCGGAGCACCTC GAAGGGAGGAAGATCCATGTTATCCTGGCCCGGAGCACCTC Direct Gain 0 0.971505747650047 0 0.960659503936768 prediction 0.943011495300094 Functional Gain - PCTP ENSG00000141179 CDS Human protein_coding chr17:53851141 chr17:53851141 synonymous SNV . 0 21 hPsi_associated_SNPs_102666 0 0 1 0 1 Ribosome 0 0.438718592512415 0.921319007873536 0 hPsi_site_1626 iPseU_CNN:0.921319007873536;iRNA_PseU:0 1627 chr6 15468887 15468887 1 + C T BLCA 15468887 + 15468867 15468907 41 AACAGCCACCAACAATGCTTCATCTTCATGCCAGTCGACCC AACAGCCACCAACAATGCTTTATCTTCATGCCAGTCGACCC Direct Gain 0 0.971497521475158 0 0.99939227104187 prediction 0.942995042950316 Functional Gain - JARID2 ENSG00000008083 CDS Human protein_coding chr6:15468887 chr6:15468887 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102667 0 0 1 0 1 Cytosol 0 0.43789974959017 0.99878454208374 0 hPsi_site_1627 iPseU_CNN:0.99878454208374;iRNA_PseU:0 1628 chr7 17379622 17379622 1 + G A LUSC 17379622 - 17379602 17379642 41 AGTGGGGTATGGGGATGGTTCAAAACTCCCCATAGGGTAGT AGTGGGGTATGGGGATGGTTTAAAACTCCCCATAGGGTAGT Direct Gain 0 0.971489349850416 0 0.999861657619476 prediction 0.942978699700831 Functional Gain - AHR ENSG00000106546 CDS Human protein_coding chr7:17379622 chr7:17379622 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_102668 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859299502 0.999723315238952 0 hPsi_site_1628 iPseU_CNN:0.999723315238952;iRNA_PseU:0 1629 chr6 7594065 7594065 1 + T A GBM 7594065 - 7594045 7594085 41 GGTACCTCTTCTTCTTTGGTATAGCCCATTTTCCTCAATCT GGTACCTCTTCTTCTTTGGTTTAGCCCATTTTCCTCAATCT Direct Gain 0 0.971477887020857 0 0.99192214012146 prediction 0.942955774041714 Functional Gain - SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594065 chr6:7594065 stopgain 0.994 1 21 hPsi_associated_SNPs_102669 0 0 0 0 0 Ribosome 0 0.43871859299807 0.98384428024292 0 hPsi_site_1629 iPseU_CNN:0.98384428024292;iRNA_PseU:0 1630 chr3 135975454 135975454 1 + G A UCEC 135975454 - 135975434 135975474 41 ATGAAATACCTGACTGAAGACATAAACCAATCTTCCATTGA ATGAAATACCTGACTGAAGATATAAACCAATCTTCCATTGA Direct Gain 0 0.97147536743842 0 0.99993109703064 prediction 0.942950734876839 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:135975454 chr3:135975454 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_102670 0 0 0 0 0 Ribosome 0 0.438717968740874 0.99986219406128 0 hPsi_site_1630 iPseU_CNN:0.99986219406128;iRNA_PseU:0 1631 chr11 125616574 125616574 1 + C A COAD 125616574 - 125616554 125616594 41 CACCTGCATCATTTCTCATTGAAAGTGATCCAGATAATGCT CACCTGCATCATTTCTCATTTAAAGTGATCCAGATAATGCT Direct Gain 0 0.971471829228554 0 0.997207283973694 prediction 0.942943658457108 Functional Gain - PATE1 ENSG00000171053 CDS Human protein_coding chr11:125616574 chr11:125616574 stopgain 0.000 0 21 hPsi_associated_SNPs_102671 0 0 0 0 0 unknown 0 0.438718315218321 0.994414567947388 0 hPsi_site_1631 iPseU_CNN:0.994414567947388;iRNA_PseU:0 1632 chr1 248367203 248367203 1 + C T BLCA 248367203 + 248367183 248367223 41 AAGATGGTGTCTGTATTCTACACCATCCTCACTCCCATGTT AAGATGGTGTCTGTATTCTATACCATCCTCACTCCCATGTT Direct Gain 0 0.971457311346575 0 0.998594462871552 prediction 0.94291462269315 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248367203 chr1:248367203 synonymous SNV . 0 21 hPsi_associated_SNPs_102672 0 0 0 0 0 exosome 0 0.438718734802346 0.997188925743104 0 hPsi_site_1632 iPseU_CNN:0.997188925743104;iRNA_PseU:0 1633 chr19 54647772 54647772 1 + G A CESC 54647772 - 54647752 54647792 41 GTAAGCTTTGGTTTTGGTCTCTCGTTCCACAACTTTGAACC GTAAGCTTTGGTTTTGGTCTTTCGTTCCACAACTTTGAACC Direct Gain 0 0.971453858489772 0 0.999953210353851 prediction 0.942907716979543 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54647772 chr19:54647772 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102673 0 0 0 0 0 Ribosome 0 0.444659254722044 0.999906420707702 0 hPsi_site_1633 iPseU_CNN:0.999906420707702;iRNA_PseU:0 1634 chr15 78566828 78566828 1 + G T rs546335398 78566828 + 78566808 78566848 41 GCTGTCTGGGTGCTAATCGTGAGATACACAGACTAGATGTC GCTGTCTGGGTGCTAATCGTTAGATACACAGACTAGATGTC Direct Gain 0 0.971410543469486 0 0.999999225139618 prediction 0.942821086938972 Functional Gain - DNAJA4 ENSG00000140403 intronic Human protein_coding chr15:78566828 chr15:78566828 . . 0 21 hPsi_associated_SNPs_102674 0 0 0 0 0 Ribosome 0 0.438665155831069 0.999998450279236 0 hPsi_site_1634 iPseU_CNN:0.999998450279236;iRNA_PseU:0 1635 chr17 48244818 48244818 1 + G A LUSC 48244818 - 48244798 48244838 41 AGGAAGGCTCAGAAACGTCTCATGGTCCAAGGTGTGCACAA AGGAAGGCTCAGAAACGTCTTATGGTCCAAGGTGTGCACAA Direct Gain 0 0.971369875042429 0 0.994497537612915 prediction 0.942739750084858 Functional Gain - SGCA ENSG00000108823 CDS Human protein_coding chr17:48244818 chr17:48244818 nonsynonymous SNV 0.001 2 21 hPsi_associated_SNPs_102675 0 0 0 0 0 Cytosol 0 0.438735792590277 0.98899507522583 0 hPsi_site_1635 iPseU_CNN:0.98899507522583;iRNA_PseU:0 1636 chr22 17308499 17308499 1 + C T SKCM 17308499 + 17308479 17308519 41 TAAAGATGAATCAACTGGTTCAAAAGCCTCCTCTGGGTCTC TAAAGATGAATCAACTGGTTTAAAAGCCTCCTCTGGGTCTC Direct Gain 0 0.971368059904928 0 0.983640849590302 prediction 0.942736119809857 Functional Gain - HSFY1P1 ENSG00000229027 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17308499 chr22:17308499 . . 0 21 hPsi_associated_SNPs_102676 0 0 0 1 0 unknown 0 0.438718592995102 0.967281699180604 0 hPsi_site_1636 iPseU_CNN:0.967281699180604;iRNA_PseU:0 1637 chr19 56165988 56165988 1 + G A rs181748886 56165988 - 56165968 56166008 41 TTCCACGGACTTGCTCCGATCTTCTCCGCCGGCCCTGTCCA TTCCACGGACTTGCTCCGATTTTCTCCGCCGGCCCTGTCCA Direct Gain 0 0.971356186447722 0 0.999817967414856 prediction 0.942712372895445 Functional Gain - U2AF2 ENSG00000063244 UTR5 Human protein_coding chr19:56165988 chr19:56165988 . . 0 21 hPsi_associated_SNPs_102677 0 0 0 0 0 Ribosome 0 0.43875562066824 0.999635934829712 0 hPsi_site_1637 iPseU_CNN:0.999635934829712;iRNA_PseU:0 1638 chr19 22256335 22256335 1 + G A KICH 22256335 - 22256315 22256355 41 GCTACCATCTCATGTCTCTTCATATTACAGGGCTCTTTTCC GCTACCATCTCATGTCTCTTTATATTACAGGGCTCTTTTCC Direct Gain 0 0.971335277287046 0 0.999689817428589 prediction 0.942670554574093 Functional Gain - ZNF257 ENSG00000197134 CDS Human protein_coding chr19:22256335 chr19:22256335 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_102678 0 0 0 0 0 chromatin 0 0.438718592995102 0.999379634857178 0 hPsi_site_1638 iPseU_CNN:0.999379634857178;iRNA_PseU:0 1639 chr6 7231941 7231941 1 + C A THCA 7231941 - 7231921 7231961 41 CCGGCCACCTCATCCTGAGTGTTGTCCTCCGCTGTCTGCAG CCGGCCACCTCATCCTGAGTTTTGTCCTCCGCTGTCTGCAG Direct Gain 0 0.971334066272145 0 0.998800158500671 prediction 0.94266813254429 Functional Gain - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231941 chr6:7231941 nonsynonymous SNV 0.175 0 21 hPsi_associated_SNPs_102679 0 0 0 0 0 Nucleus 0 0.438717433739797 0.997600317001342 0 hPsi_site_1639 iPseU_CNN:0.997600317001342;iRNA_PseU:0 1640 chr12 49933202 49933202 1 + G A CESC 49933202 - 49933182 49933222 41 AGGAGGCCCCGCATGGCCGGCATCTTAGGCGCCCGCGGCTG AGGAGGCCCCGCATGGCCGGTATCTTAGGCGCCCGCGGCTG Direct Gain 0 0.971318950503273 0 0.99996018409729 prediction 0.942637901006546 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49933202 chr12:49933202 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102680 0 0 0 0 0 chromatin 0 0.438718584952165 0.99992036819458 0 hPsi_site_1640 iPseU_CNN:0.99992036819458;iRNA_PseU:0 1641 chr17 27383737 27383737 1 + C T rs141171026 27383737 + 27383717 27383757 41 GGGGGCCGGGTGTGGTGGCTCACACCTGTAATCTCGGCACT GGGGGCCGGGTGTGGTGGCTTACACCTGTAATCTCGGCACT Direct Gain 0 0.97131675564093 0 0.998837351799011 prediction 0.942633511281859 Functional Gain - PIPOX ENSG00000179761 UTR3 Human protein_coding chr17:27383737 chr17:27383737 . . 0 21 hPsi_associated_SNPs_102681 0 0 0 0 0 cytosol 0 0.438721862234875 0.997674703598022 0 hPsi_site_1641 iPseU_CNN:0.997674703598022;iRNA_PseU:0 1642 chr10 104569675 104569675 1 + C A LUAD 104569675 - 104569655 104569695 41 CAGCAGCAGCTCAGGATGATGATGATGGTCCACACCAGCCA CAGCAGCAGCTCAGGATGATTATGATGGTCCACACCAGCCA Direct Gain 0 0.971316462997025 0 0.713756442070007 prediction 0.942632925994049 Functional Gain - WBP1L ENSG00000166272 CDS Human protein_coding chr10:104569675 chr10:104569675 synonymous SNV . 0 21 hPsi_associated_SNPs_102682 0 0 0 0 0 chromatin 0 0.437798817348165 0.427512884140014 0 hPsi_site_1642 iPseU_CNN:0.427512884140014;iRNA_PseU:0 1643 chr3 175293915 175293915 1 + C T SKCM 175293915 + 175293895 175293935 41 CAAGGTGATGCTGATTATTTCATCAACCATCTTGGAGTTCC CAAGGTGATGCTGATTATTTTATCAACCATCTTGGAGTTCC Direct Gain 0 0.971314627861453 0 0.699809193611145 prediction 0.942629255722907 Functional Gain - NAALADL2 ENSG00000177694 CDS Human protein_coding chr3:175293915 chr3:175293915 synonymous SNV . 0 21 hPsi_associated_SNPs_102683 0 0 0 0 2 exosome 0 0.438718739335818 0.39961838722229 0 hPsi_site_1643 iPseU_CNN:0.39961838722229;iRNA_PseU:0 1644 chr19 14041323 14041323 1 + C T rs73925405 14041323 + 14041303 14041343 41 AGCGGACAATCGGTTCTGGACTCACCCCTCATCCGGGCCCC AGCGGACAATCGGTTCTGGATTCACCCCTCATCCGGGCCCC Direct Gain 0 0.971305424664843 0 0.999967932701111 prediction 0.942610849329687 Functional Gain - CC2D1A ENSG00000132024 UTR3 Human protein_coding chr19:14041323 chr19:14041323 . . 0 21 hPsi_associated_SNPs_102684 0 0 1 0 0 chromatin 0 0.438808712163224 0.999935865402222 0 hPsi_site_1644 iPseU_CNN:0.999935865402222;iRNA_PseU:0 1645 chr13 29598832 29598832 1 + G T READ 29598832 + 29598812 29598852 41 AGCAGCCCCACCAAAGGGTTGACAATGAGCGTCCCAGTGGC AGCAGCCCCACCAAAGGGTTTACAATGAGCGTCCCAGTGGC Direct Gain 0 0.971282524697571 0 0.974889874458313 prediction 0.942565049395143 Functional Gain - MTUS2 ENSG00000132938 CDS Human protein_coding chr13:29598832 chr13:29598832 nonsynonymous SNV 0.447 0 21 hPsi_associated_SNPs_102685 0 0 0 0 0 nucleus 0 0.438718575205267 0.949779748916626 0 hPsi_site_1645 iPseU_CNN:0.949779748916626;iRNA_PseU:0 1646 chr3 61975440 61975440 1 + C T SARC 61975440 + 61975420 61975460 41 CGATGGCTTCGACAATGAGTCTTCTAACAAAACCTGGATGA CGATGGCTTCGACAATGAGTTTTCTAACAAAACCTGGATGA Direct Gain 0 0.971276812683061 0 0.981374859809875 prediction 0.942553625366122 Functional Gain - PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975440 chr3:61975440 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102686 0 0 1 0 1 Ribosome 0 0.439038699932643 0.96274971961975 0 hPsi_site_1646 iPseU_CNN:0.96274971961975;iRNA_PseU:0 1647 chr4 8616150 8616150 1 + G T UCEC 8616150 + 8616130 8616170 41 ACGGTAGAGCTGGGCTGTGTGAAGTTCCCCCCCGAGGAGGC ACGGTAGAGCTGGGCTGTGTTAAGTTCCCCCCCGAGGAGGC Direct Gain 0 0.971264692154428 0 0.993080019950867 prediction 0.942529384308856 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8616150 chr4:8616150 synonymous SNV . 0 21 hPsi_associated_SNPs_102687 0 0 1 2 2 Endoplasmic reticulum 0 0.438718603302167 0.986160039901734 0 hPsi_site_1647 iPseU_CNN:0.986160039901734;iRNA_PseU:0 1648 chr2 112786202 112786202 1 + G A SKCM 112786202 - 112786182 112786222 41 TCCTTCATGAGGTTTGCTGTCATGAACTTCTGCTGTGACCA TCCTTCATGAGGTTTGCTGTTATGAACTTCTGCTGTGACCA Direct Gain 0 0.971262635727182 0 0.472122848033905 prediction 0.942525271454364 Functional Gain - MERTK ENSG00000153208 CDS Human protein_coding chr2:112786202 chr2:112786202 nonsynonymous SNV 0.888 0 21 hPsi_associated_SNPs_102688 0 0 0 0 0 Endoplasmic reticulum 0 0.438693083463935 0 0 hPsi_site_1648 iPseU_CNN:0;iRNA_PseU:0 1649 chr2 85646315 85646315 1 + G A rs367909334 85646315 - 85646295 85646335 41 CGCAGGGCGCCGACGATGGTCAGATACCGCGGCCTGCACAC CGCAGGGCGCCGACGATGGTTAGATACCGCGGCCTGCACAC Direct Gain 0 0.971219679126295 0 0.987205743789673 prediction 0.94243935825259 Functional Gain - SH2D6 ENSG00000152292 UTR5 Human protein_coding chr2:85646315 chr2:85646315 . . 0 21 hPsi_associated_SNPs_102689 0 0 0 0 0 exosome 0 0.426404378103553 0.974411487579346 0 hPsi_site_1649 iPseU_CNN:0.974411487579346;iRNA_PseU:0 1650 chr19 19455750 19455750 1 + G A rs8102280 19455750 - 19455730 19455770 41 GGATTCTCCCGGGGTGTTGTCACAGGGTTACTCACCAGCAA GGATTCTCCCGGGGTGTTGTTACAGGGTTACTCACCAGCAA Direct Gain 0 0.971216826679891 0 0.996555149555206 prediction 0.942433653359783 Functional Gain - MAU2 ENSG00000129933 intronic Human protein_coding chr19:19455750 chr19:19455750 . . 0 21 hPsi_associated_SNPs_102690 0 1 0 0 0 Nucleus 0 0.438718592836903 0.993110299110412 0 hPsi_site_1650 iPseU_CNN:0.993110299110412;iRNA_PseU:0 1651 chr1 162767679 162767679 1 + G A rs114630349 162767679 - 162767659 162767699 41 AAATGGCCAAAGACATTGGTCTCAAACACCTCCTGAAGTCC AAATGGCCAAAGACATTGGTTTCAAACACCTCCTGAAGTCC Direct Gain 0 0.971200593180471 0 0.99933385848999 prediction 0.942401186360943 Functional Gain - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162767679 chr1:162767679 synonymous SNV . 0 21 hPsi_associated_SNPs_102691 0 0 0 0 0 Endoplasmic reticulum 0 0.438718774532939 0.99866771697998 0 hPsi_site_1651 iPseU_CNN:0.99866771697998;iRNA_PseU:0 1652 chrX 153032699 153032699 1 + G A rs111247447 153032699 - 153032679 153032719 41 CCAAGGCGCCGTGTCTCACACACGCCCTGCCGCACCTGCCC CCAAGGCGCCGTGTCTCACATACGCCCTGCCGCACCTGCCC Direct Gain 0 0.97119764991562 0 0.989610373973846 prediction 0.942395299831241 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153032699 chrX:153032699 synonymous SNV . 0 21 hPsi_associated_SNPs_102692 0 0 0 0 0 Endoplasmic reticulum 0 0.438718565592914 0.979220747947692 0 hPsi_site_1652 iPseU_CNN:0.979220747947692;iRNA_PseU:0 1653 chr4 70146905 70146905 1 + G A SKCM 70146905 - 70146885 70146925 41 TAAAACTGATCCCACTTCTTCATATCACACATTTGGAACCA TAAAACTGATCCCACTTCTTTATATCACACATTTGGAACCA Direct Gain 0 0.971188296649545 0 0.438941538333893 prediction 0.942376593299091 Functional Gain - UGT2B28 ENSG00000135226 CDS Human protein_coding chr4:70146905 chr4:70146905 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102693 0 0 0 0 0 exosome 0 0.438718595523593 0 0 hPsi_site_1653 iPseU_CNN:0;iRNA_PseU:0 1654 chr3 127379340 127379340 1 + C T UCEC 127379340 + 127379320 127379360 41 ATCTGGTTGAGCCTCCCTGGCATATGCCTCCCAGAGAGGAG ATCTGGTTGAGCCTCCCTGGTATATGCCTCCCAGAGAGGAG Direct Gain 0 0.971158593335054 0 0.999853253364563 prediction 0.942317186670108 Functional Gain - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379340 chr3:127379340 nonsynonymous SNV 0.946 1 21 hPsi_associated_SNPs_102694 0 0 1 0 0 chromatin 0 0.438718592995106 0.999706506729126 0 hPsi_site_1654 iPseU_CNN:0.999706506729126;iRNA_PseU:0 1655 chr17 18023599 18023599 1 + G A UCS 18023599 - 18023579 18023619 41 TCCAGAGAGGGTGGCAGGGGCACCTCCAGCTTCTCCTTCCC TCCAGAGAGGGTGGCAGGGGTACCTCCAGCTTCTCCTTCCC Direct Gain 0 0.971156695384803 0 0.999293804168701 prediction 0.942313390769606 Functional Gain - MYO15A ENSG00000091536 CDS Human protein_coding chr17:18023599 chr17:18023599 synonymous SNV . 0 21 hPsi_associated_SNPs_102695 0 0 0 0 0 chromatin 0 0.438722704552269 0.998587608337402 0 hPsi_site_1655 iPseU_CNN:0.998587608337402;iRNA_PseU:0 1656 chr22 42354085 42354085 1 + G A rs527579614 42354085 - 42354065 42354105 41 CAAGCCCTGGGCCAGCCAGGCACCTAAGTGCCCCACCTCCA CAAGCCCTGGGCCAGCCAGGTACCTAAGTGCCCCACCTCCA Direct Gain 0 0.971131362059861 0 0.999875426292419 prediction 0.942262724119721 Functional Gain - LINC00634 ENSG00000205704 ncRNA_exonic Human transcribed_unitary_pseudogene chr22:42354085 chr22:42354085 . . 0 21 hPsi_associated_SNPs_102696 0 0 0 0 0 unknown 0 0.43871864397882 0.999750852584838 0 hPsi_site_1656 iPseU_CNN:0.999750852584838;iRNA_PseU:0 1657 chr1 181020069 181020069 1 + G A rs112526759 181020069 - 181020049 181020089 41 GGCTGATCATGATCATGGCTCACTGCAGCCTTGACCTTCCA GGCTGATCATGATCATGGCTTACTGCAGCCTTGACCTTCCA Direct Gain 0 0.971130213221465 0 0.936300575733185 prediction 0.942260426442929 Functional Gain - MR1 ENSG00000153029 intronic Human protein_coding chr1:181020069 chr1:181020069 . . 0 21 hPsi_associated_SNPs_102697 0 0 0 0 0 Endoplasmic reticulum 0 0.438963852742542 0.87260115146637 0 hPsi_site_1657 iPseU_CNN:0.87260115146637;iRNA_PseU:0 1658 chr8 92088846 92088846 1 + G T rs542386416 92088846 + 92088826 92088866 41 GGATAGAAGGAGCTCTCTGTGTTGTCCTTGGTCCCTGCTCT GGATAGAAGGAGCTCTCTGTTTTGTCCTTGGTCCCTGCTCT Direct Gain 0 0.971128840232595 0 0.335992097854614 prediction 0.942257680465191 Functional Gain - OTUD6B ENSG00000155100;ENSG00000155100 UTR5;UTR3 Human other chr8:92088846 chr8:92088846 . . 0 21 hPsi_associated_SNPs_102698 0 0 1 0 1 Ribosome 0 0.438718593004057 0 0 hPsi_site_1658 iPseU_CNN:0;iRNA_PseU:0 1659 chr1 248059653 248059653 1 + C A LUAD 248059653 - 248059633 248059673 41 GGCTGCATGTACATGTAGATGATGTTTCCATAGAAAAGGGA GGCTGCATGTACATGTAGATTATGTTTCCATAGAAAAGGGA Direct Gain 0 0.971121942604265 0 0.998605847358704 prediction 0.94224388520853 Functional Gain - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059653 chr1:248059653 synonymous SNV . 0 21 hPsi_associated_SNPs_102699 0 0 0 0 0 exosome 0 0.438739103829897 0.997211694717408 0 hPsi_site_1659 iPseU_CNN:0.997211694717408;iRNA_PseU:0 1660 chr6 25770495 25770495 1 + C T LUSC 25770495 + 25770475 25770515 41 AATGCGGGAGTGGCCTTGCTCATTGTCCTCCGGATTGTACA AATGCGGGAGTGGCCTTGCTTATTGTCCTCCGGATTGTACA Direct Gain 0 0.971118932208135 0 0.0579331815242767 prediction 0.94223786441627 Functional Gain - SLC17A4 ENSG00000146039 CDS Human protein_coding chr6:25770495 chr6:25770495 synonymous SNV . 0 21 hPsi_associated_SNPs_102700 0 0 0 0 1 exosome 0 0.43871857891008 0 0 hPsi_site_1660 iPseU_CNN:0;iRNA_PseU:0 1661 chr14 22892011 22892011 1 + C T UCEC 22892011 + 22891991 22892031 41 ATCAGAGAGAGATGAAGGGTCTTACTACTGTGCCTGTGACA ATCAGAGAGAGATGAAGGGTTTTACTACTGTGCCTGTGACA Direct Gain 0 0.971109266265809 0 0.08846315741539 prediction 0.942218532531618 Functional Gain - OR4E1;LINC02332 ENSG00000211821 CDS Human TR_V_gene chr14:22892011 chr14:22892011 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_102701 0 0 0 0 0 unknown 0 0.438701716183437 0 0 hPsi_site_1661 iPseU_CNN:0;iRNA_PseU:0 1662 chr2 24974934 24974934 1 + C T LUSC 24974934 + 24974914 24974954 41 CGATGCCAATCCCTCCTCCTCAGAGTTCTCTTCTCCAGCAA CGATGCCAATCCCTCCTCCTTAGAGTTCTCTTCTCCAGCAA Direct Gain 0 0.971107087641512 0 0.00865161418914795 prediction 0.942214175283025 Functional Gain - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24974934 chr2:24974934 stopgain 1.000 1 21 hPsi_associated_SNPs_102702 0 0 1 0 2 Cytosol 0 0.438646624197866 0 0 hPsi_site_1662 iPseU_CNN:0;iRNA_PseU:0 1663 chr1 12919744 12919744 1 + G A SKCM 12919744 - 12919724 12919764 41 GAAGAGGTATCTCAGGCATTCATCCTGGGGTATTTCCTTGA GAAGAGGTATCTCAGGCATTTATCCTGGGGTATTTCCTTGA Direct Gain 0 0.97109617548915 0 0.999971747398376 prediction 0.9421923509783 Functional Gain - PRAMEF2 ENSG00000120952 CDS Human protein_coding chr1:12919744 chr1:12919744 nonsynonymous SNV 0.008 1 21 hPsi_associated_SNPs_102703 0 0 0 0 0 unknown 0 0.438718592995273 0.999943494796752 0 hPsi_site_1663 iPseU_CNN:0.999943494796752;iRNA_PseU:0 1664 chr2 80816596 80816596 1 + G A SKCM 80816596 - 80816576 80816616 41 CCTCACCTTGTGAAGTCTGTCATTTCCATCATGATCATACA CCTCACCTTGTGAAGTCTGTTATTTCCATCATGATCATACA Direct Gain 0 0.971088476533826 0 0.308011949062347 prediction 0.942176953067652 Functional Gain - CTNNA2 ENSG00000066032 CDS Human protein_coding chr2:80816596 chr2:80816596 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102704 0 0 0 0 0 nucleoplasm 0 0.438659877192912 0 0 hPsi_site_1664 iPseU_CNN:0;iRNA_PseU:0 1665 chr3 184020291 184020291 1 + G A COAD 184020291 - 184020271 184020311 41 CTTGCAGGAGGTGAAGATGTCTTCTACCAACTCCATGTCAT CTTGCAGGAGGTGAAGATGTTTTCTACCAACTCCATGTCAT Direct Gain 0 0.971084652577864 0 0.984218895435333 prediction 0.942169305155727 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184020291 chr3:184020291 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102705 0 0 0 0 0 Ribosome 0 0.438298879989417 0.968437790870666 0 hPsi_site_1665 iPseU_CNN:0.968437790870666;iRNA_PseU:0 1666 chr2 113676257 113676257 1 + C T SKCM 113676257 + 113676237 113676277 41 GCGGCTCACCCCGGATGGTTCATCTGCACCTCCTGCAATTG GCGGCTCACCCCGGATGGTTTATCTGCACCTCCTGCAATTG Direct Gain 0 0.971072646007329 0 0.96449339389801 prediction 0.942145292014658 Functional Gain - IL37 ENSG00000125571 CDS Human protein_coding chr2:113676257 chr2:113676257 synonymous SNV . 0 21 hPsi_associated_SNPs_102706 0 0 0 0 0 exosome 0 0.43872113965493 0.92898678779602 0 hPsi_site_1666 iPseU_CNN:0.92898678779602;iRNA_PseU:0 1667 chr12 132398342 132398342 1 + C T SKCM 132398342 + 132398322 132398362 41 GAGCCACGGCCGGACCCCATCTCCATCCCCACCCTGCAGCA GAGCCACGGCCGGACCCCATTTCCATCCCCACCCTGCAGCA Direct Gain 0 0.971059896382627 0 0.356270372867584 prediction 0.942119792765254 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132398342 chr12:132398342 nonsynonymous SNV 0.593 2 21 hPsi_associated_SNPs_102707 0 0 1 0 1 Cytosol 0 0.438706921051181 0 0 hPsi_site_1667 iPseU_CNN:0;iRNA_PseU:0 1668 chr11 121008677 121008677 1 + G A OV 121008677 - 121008657 121008697 41 ATGCTGTAGCCAAACACGGTCACGTCCACCTGCTTAACCCA ATGCTGTAGCCAAACACGGTTACGTCCACCTGCTTAACCCA Direct Gain 0 0.97104886142483 0 0.0373584628105164 prediction 0.94209772284966 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:121008677 chr11:121008677 synonymous SNV . 0 21 hPsi_associated_SNPs_102708 0 0 0 0 0 exosome 0 0.43859375114731 0 0 hPsi_site_1668 iPseU_CNN:0;iRNA_PseU:0 1669 chr10 73269849 73269849 1 + G A COAD 73269849 - 73269829 73269869 41 TCTTGGGCCAGCAACTGGGTCACAGAAGAACCTGGAGTAGC TCTTGGGCCAGCAACTGGGTTACAGAAGAACCTGGAGTAGC Direct Gain 0 0.971031785346518 0 0.999938011169434 prediction 0.942063570693035 Functional Gain - CDH23 ENSG00000107736 CDS Human protein_coding chr10:73269849 chr10:73269849 synonymous SNV . 0 21 hPsi_associated_SNPs_102709 0 0 0 0 0 exosome 0 0.438718775544175 0.999876022338868 0 hPsi_site_1669 iPseU_CNN:0.999876022338868;iRNA_PseU:0 1670 chr19 35843347 35843347 1 + C A rs74530614 35843347 - 35843327 35843367 41 AGCAGTGGCGTTACTTCTGGGACTTGCCCCCTTGCGTTCTT AGCAGTGGCGTTACTTCTGGTACTTGCCCCCTTGCGTTCTT Direct Gain 0 0.971016990852677 0 0.735407590866089 prediction 0.942033981705353 Functional Gain - FFAR1 ENSG00000126266 CDS Human protein_coding chr19:35843347 chr19:35843347 nonsynonymous SNV 0.025 0 21 hPsi_associated_SNPs_102710 0 0 0 0 0 exosome 0 0.438718592994043 0.470815181732178 0 hPsi_site_1670 iPseU_CNN:0.470815181732178;iRNA_PseU:0 1671 chr12 7301635 7301635 1 + G T LUSC 7301635 + 7301615 7301655 41 ACGTGGTCGTCCTTCAGCCTGACGCCCCCCAGATCCTGCTG ACGTGGTCGTCCTTCAGCCTTACGCCCCCCAGATCCTGCTG Direct Gain 0 0.971003842880317 0 0.990385830402374 prediction 0.942007685760635 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7301635 chr12:7301635 nonsynonymous SNV 0.489 4 21 hPsi_associated_SNPs_102711 0 0 1 0 1 Endoplasmic reticulum 0 0.438718593011342 0.980771660804748 0 hPsi_site_1671 iPseU_CNN:0.980771660804748;iRNA_PseU:0 1672 chr19 1032665 1032665 1 + G A LUAD 1032665 - 1032645 1032685 41 AGGGCGAGAAGAGACACCTGCACCTGCGTCATGTTCCCACT AGGGCGAGAAGAGACACCTGTACCTGCGTCATGTTCCCACT Direct Gain 0 0.970958655485577 0 0.999997615814209 prediction 0.941917310971153 Functional Gain - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1032665 chr19:1032665 synonymous SNV . 0 21 hPsi_associated_SNPs_102712 0 0 0 0 0 Ribosome 0 0.438696997655625 0.999995231628418 0 hPsi_site_1672 iPseU_CNN:0.999995231628418;iRNA_PseU:0 1673 chr9 75781089 75781089 1 + G T UCEC 75781089 + 75781069 75781109 41 GAGTTGAAAGGTGACATTGAGAAATGCCTCACAGCTATCGG GAGTTGAAAGGTGACATTGATAAATGCCTCACAGCTATCGG Direct Gain 0 0.97095029199787 0 0.999518632888794 prediction 0.94190058399574 Functional Gain - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75781089 chr9:75781089 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102713 0 0 1 0 1 Cytosol 0 0.441834760083426 0.999037265777588 0 hPsi_site_1673 iPseU_CNN:0.999037265777588;iRNA_PseU:0 1674 chr5 118837760 118837760 1 + G A BLCA 118837760 - 118837740 118837780 41 GGGAAGTGGTTTATATAACTCTAAGTACTGCTCTCCATGAA GGGAAGTGGTTTATATAACTTTAAGTACTGCTCTCCATGAA Direct Gain 0 0.970946079141332 0 0.999269127845764 prediction 0.941892158282664 Functional Gain - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118837760 chr5:118837760 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_102714 0 0 0 0 0 Cytosol 0 0.438718440541034 0.998538255691528 0 hPsi_site_1674 iPseU_CNN:0.998538255691528;iRNA_PseU:0 1675 chr10 43292475 43292475 1 + G A BLCA 43292475 - 43292455 43292495 41 ACTGAGTGAGGAGCTTTCTTCAGATTCATCTTCAGATGCAA ACTGAGTGAGGAGCTTTCTTTAGATTCATCTTCAGATGCAA Direct Gain 0 0.970944153188946 0 0.999996542930603 prediction 0.941888306377893 Functional Gain - BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292475 chr10:43292475 nonsynonymous SNV 0.850 0 21 hPsi_associated_SNPs_102715 0 0 0 0 0 chromatin 0 0.439287622741401 0.999993085861206 0 hPsi_site_1675 iPseU_CNN:0.999993085861206;iRNA_PseU:0 1676 chr4 79258872 79258872 1 + G A BLCA 79258872 - 79258852 79258892 41 AGGGTAACAGGAGATGCAGTCAGACTCCAACGGCCCATGAC AGGGTAACAGGAGATGCAGTTAGACTCCAACGGCCCATGAC Direct Gain 0 0.970941151360211 0 0.999994158744812 prediction 0.941882302720422 Functional Gain - FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79258872 chr4:79258872 nonsynonymous SNV 0.278 0 21 hPsi_associated_SNPs_102716 0 0 0 0 0 Nucleus 0 0.440753714603158 0.999988317489624 0 hPsi_site_1676 iPseU_CNN:0.999988317489624;iRNA_PseU:0 1677 chr14 24587348 24587348 1 + C T SKCM 24587348 + 24587328 24587368 41 AGCAAAGATGGTCAAATATTCATGTCTGCTTGCCAAGGTAC AGCAAAGATGGTCAAATATTTATGTCTGCTTGCCAAGGTAC Direct Gain 0 0.970931552656541 0 0.373901546001434 prediction 0.941863105313083 Functional Gain - DCAF11 ENSG00000100897 CDS Human protein_coding chr14:24587348 chr14:24587348 synonymous SNV . 0 21 hPsi_associated_SNPs_102717 0 0 1 0 2 Ribosome 0 0.43841405768509 0 0 hPsi_site_1677 iPseU_CNN:0;iRNA_PseU:0 1678 chrX 15782795 15782795 1 + C T rs752702507 15782795 + 15782775 15782815 41 GACAGTGTTTATGATCCCGGCTTAAAACCACTGACCATCTC GACAGTGTTTATGATCCCGGTTTAAAACCACTGACCATCTC Direct Gain 0 0.970909298794912 0 0.999847173690796 prediction 0.941818597589824 Functional Gain - CA5B ENSG00000169239 CDS Human protein_coding chrX:15782795 chrX:15782795 synonymous SNV . 0 21 hPsi_associated_SNPs_102718 0 0 0 0 1 Nucleus 0 0.438773754633393 0.999694347381592 0 hPsi_site_1678 iPseU_CNN:0.999694347381592;iRNA_PseU:0 1679 chr6 45515041 45515041 1 + G T UCEC 45515041 + 45515021 45515061 41 ATCTGTTTGGCGACCATATTGAAATTCCTCAGCAGTGGCCC ATCTGTTTGGCGACCATATTTAAATTCCTCAGCAGTGGCCC Direct Gain 0 0.970904781990104 0 0.999947667121887 prediction 0.941809563980208 Functional Gain - RUNX2 ENSG00000124813 CDS Human protein_coding chr6:45515041 chr6:45515041 stoploss 1.000 0 21 hPsi_associated_SNPs_102719 0 0 0 0 0 Cytosol 0 0.438718720730939 0.999895334243774 0 hPsi_site_1679 iPseU_CNN:0.999895334243774;iRNA_PseU:0 1680 chr15 71188211 71188211 1 + C T UCEC 71188211 + 71188191 71188231 41 GAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAG GAATTCAAGCTAAATAAAGATACATCGTCATTCCCCGGTAG Direct Gain 0 0.970887084408898 0 0.994355738162994 prediction 0.941774168817796 Functional Gain - LRRC49 ENSG00000137821 CDS Human protein_coding chr15:71188211 chr15:71188211 synonymous SNV . 0 21 hPsi_associated_SNPs_102720 0 0 0 0 2 nucleus 0 0.4387181233012 0.988711476325988 0 hPsi_site_1680 iPseU_CNN:0.988711476325988;iRNA_PseU:0 1681 chr22 29439334 29439334 1 + G A HNSC 29439334 - 29439314 29439354 41 TTAATGGCATCTGCACCCTTCACATACACCACCGGCCTCTT TTAATGGCATCTGCACCCTTTACATACACCACCGGCCTCTT Direct Gain 0 0.970882316396217 0 0.999995589256287 prediction 0.941764632792434 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29439334 chr22:29439334 synonymous SNV . 0 21 hPsi_associated_SNPs_102721 0 0 0 0 0 Ribosome 0 0.438720210891068 0.999991178512574 0 hPsi_site_1681 iPseU_CNN:0.999991178512574;iRNA_PseU:0 1682 chr5 50687246 50687246 1 + G T UCEC 50687246 + 50687226 50687266 41 GCGACTTCGCCTTGCAGAGTGACATAGATCAGCCTGCTTTT GCGACTTCGCCTTGCAGAGTTACATAGATCAGCCTGCTTTT Direct Gain 0 0.970859174580776 0 0.841540098190308 prediction 0.941718349161552 Functional Gain - ISL1 ENSG00000016082 CDS Human protein_coding chr5:50687246 chr5:50687246 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102722 0 0 0 0 1 exosome 0 0.43777428157571 0.683080196380616 0 hPsi_site_1682 iPseU_CNN:0.683080196380616;iRNA_PseU:0 1683 chr1 93299193 93299193 1 + G A rs58263806 93299193 - 93299173 93299213 41 CAAATGATATCTCTGTTTGTCACACGAACTATCATCCTGTA CAAATGATATCTCTGTTTGTTACACGAACTATCATCCTGTA Direct Gain 0 0.970855289065108 0 0.693126797676086 prediction 0.941710578130217 Functional Gain - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299193 chr1:93299193 synonymous SNV . 0 21 hPsi_associated_SNPs_102723 1 0 0 0 0 Cytosol 0 0.43856622745209 0.386253595352172 0 hPsi_site_1683 iPseU_CNN:0.386253595352172;iRNA_PseU:0 1684 chr12 2760913 2760913 1 + G T KIRP 2760913 + 2760893 2760933 41 GGCATCCGGACGCTGCTGTGGACCTTCATCAAGTCCTTCCA GGCATCCGGACGCTGCTGTGTACCTTCATCAAGTCCTTCCA Direct Gain 0 0.970842450440239 0 0.99999874830246 prediction 0.941684900880478 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2760913 chr12:2760913 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102724 0 0 0 0 1 Cytosol 0 0.438342514636648 0.99999749660492 0 hPsi_site_1684 iPseU_CNN:0.99999749660492;iRNA_PseU:0 1685 chr7 33390918 33390918 1 + C T SKCM 33390918 + 33390898 33390938 41 GGAAGGAAATGCTGTTGTTTCTTATTCCAGACCAACAGGTA GGAAGGAAATGCTGTTGTTTTTTATTCCAGACCAACAGGTA Direct Gain 0 0.970817687424752 0 0.999463021755219 prediction 0.941635374849504 Functional Gain - BBS9 ENSG00000122507 CDS Human protein_coding chr7:33390918 chr7:33390918 nonsynonymous SNV 0.992 3 21 hPsi_associated_SNPs_102725 0 0 0 0 2 cytosol 0 0.438718592998157 0.998926043510438 0 hPsi_site_1685 iPseU_CNN:0.998926043510438;iRNA_PseU:0 1686 chr9 36163495 36163495 1 + T A rs188182899 36163495 - 36163475 36163515 41 CTGCAGCCACAGCTGCCAGGAACAGGCCTGGGCTCCCGCCC CTGCAGCCACAGCTGCCAGGTACAGGCCTGGGCTCCCGCCC Direct Gain 0 0.97079961916822 0 1 prediction 0.94159923833644 Functional Gain - GLIPR2 ENSG00000122694 UTR3 Human protein_coding chr9:36163495 chr9:36163495 . . 0 21 hPsi_associated_SNPs_102726 0 0 0 0 0 Ribosome 0 0.43877707727801 1 0 hPsi_site_1686 iPseU_CNN:1;iRNA_PseU:0 1687 chr11 114113010 114113010 1 + C T UCEC 114113010 + 114112990 114113030 41 ATCTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGGC ATCTGCAGTGAGTGCAACCGTACCTTCCCCAGCCACACGGC Direct Gain 0 0.970798979661255 0 0.981344521045685 prediction 0.94159795932251 Functional Gain - ZBTB16 ENSG00000109906 CDS Human protein_coding chr11:114113010 chr11:114113010 synonymous SNV . 0 21 hPsi_associated_SNPs_102727 0 0 0 0 1 Nucleus 0 0.439642861346284 0.96268904209137 0 hPsi_site_1687 iPseU_CNN:0.96268904209137;iRNA_PseU:0 1688 chr6 31000040 31000040 1 + C T rs185820579 31000040 + 31000020 31000060 41 ATGGCCCCTGGAATGGACTTCACGGCCTCTGCTGCCAGCCA ATGGCCCCTGGAATGGACTTTACGGCCTCTGCTGCCAGCCA Direct Gain 0 0.970792092794017 0 0.997626066207886 prediction 0.941584185588035 Functional Gain - MUC22 ENSG00000261272 CDS Human protein_coding chr6:31000040 chr6:31000040 synonymous SNV . 0 21 hPsi_associated_SNPs_102728 0 0 0 0 1 unknown 0 0.43871859299353 0.995252132415772 0 hPsi_site_1688 iPseU_CNN:0.995252132415772;iRNA_PseU:0 1689 chr2 175411945 175411945 1 + G A rs80311350 175411945 - 175411925 175411965 41 GTTTGATGCTCTCATGGGGTCTTCAAAGACACCGCCGCCTC GTTTGATGCTCTCATGGGGTTTTCAAAGACACCGCCGCCTC Direct Gain 0 0.970784581404005 0 0.999991416931152 prediction 0.94156916280801 Functional Gain - GPR155;RNU6-2 ENSG00000236449 ncRNA_exonic Human antisense chr2:175411945 chr2:175411945 . . 0 21 hPsi_associated_SNPs_102729 0 0 0 0 0 unknown 0 0.438447141502917 0.999982833862304 0 hPsi_site_1689 iPseU_CNN:0.999982833862304;iRNA_PseU:0 1690 chr12 132446100 132446100 1 + G T UCEC 132446100 + 132446080 132446120 41 GGGGGCGCAGCGGGGTTTGGGATGACGTCCCCACCCCCGCC GGGGGCGCAGCGGGGTTTGGTATGACGTCCCCACCCCCGCC Direct Gain 0 0.970769549850198 0 0.914790093898773 prediction 0.941539099700395 Functional Gain - EP400 ENSG00000183495 CDS Human protein_coding chr12:132446100 chr12:132446100 synonymous SNV . 0 21 hPsi_associated_SNPs_102730 0 0 0 0 0 Cytosol 0 0.437365902915295 0.829580187797546 0 hPsi_site_1690 iPseU_CNN:0.829580187797546;iRNA_PseU:0 1691 chr7 150772823 150772823 1 + G A STAD 150772823 - 150772803 150772843 41 TCTGGGTGGTGTTTGGGCGGCATGAGCAGCAGATGCAGCCG TCTGGGTGGTGTTTGGGCGGTATGAGCAGCAGATGCAGCCG Direct Gain 0 0.970768033861028 0 0.997966766357422 prediction 0.941536067722055 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772823 chr7:150772823 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_102731 0 0 0 0 0 Ribosome 0 0.437770351192834 0.995933532714844 0 hPsi_site_1691 iPseU_CNN:0.995933532714844;iRNA_PseU:0 1692 chr10 90649867 90649867 1 + G A rs574911424 90649867 - 90649847 90649887 41 AAGGCACCCCATCCTCAGTTCATACTTCCACTTTCTACCCA AAGGCACCCCATCCTCAGTTTATACTTCCACTTTCTACCCA Direct Gain 0 0.970740197555024 0 0.28869092464447 prediction 0.941480395110048 Functional Gain - STAMBPL1 ENSG00000138134 intronic Human protein_coding chr10:90649867 chr10:90649867 . . 0 21 hPsi_associated_SNPs_102732 0 0 0 0 0 Nucleus 0 0.438718579442085 0 0 hPsi_site_1692 iPseU_CNN:0;iRNA_PseU:0 1693 chr1 248551041 248551041 1 + C T SKCM 248551041 + 248551021 248551061 41 GCCATGATAGCTAATGGGGTCATGATCTTCCTGATTAACAT GCCATGATAGCTAATGGGGTTATGATCTTCCTGATTAACAT Direct Gain 0 0.970728739953697 0 0.991291761398315 prediction 0.941457479907394 Functional Gain - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551041 chr1:248551041 synonymous SNV . 0 21 hPsi_associated_SNPs_102733 0 0 0 0 0 unknown 0 0.439143171117091 0.98258352279663 0 hPsi_site_1693 iPseU_CNN:0.98258352279663;iRNA_PseU:0 1694 chr2 239142895 239142895 1 + G A UCEC 239142895 - 239142875 239142915 41 GAACTGCAGCAAACAGCATTCTTATGGGTAGCTAACAGACA GAACTGCAGCAAACAGCATTTTTATGGGTAGCTAACAGACA Direct Gain 0 0.970725978243286 0 0.222946554422379 prediction 0.941451956486572 Functional Gain - LOC643387 ENSG00000225057 ncRNA_intronic Human processed_transcript chr2:239142895 chr2:239142895 . . 0 21 hPsi_associated_SNPs_102734 0 0 0 0 0 unknown 0 0.438829616769691 0 0 hPsi_site_1694 iPseU_CNN:0;iRNA_PseU:0 1695 chr6 24536843 24536843 1 + C T rs532636189 24536843 + 24536823 24536863 41 TGAAGAAAGTACTTTTCTGGCATAGCTACCGTGAGTTCTCA TGAAGAAAGTACTTTTCTGGTATAGCTACCGTGAGTTCTCA Direct Gain 0 0.970722148046449 0 0.9996657371521 prediction 0.941444296092899 Functional Gain - ALDH5A1 ENSG00000112294 UTR3 Human protein_coding chr6:24536843 chr6:24536843 . . 0 21 hPsi_associated_SNPs_102735 0 0 1 0 0 Nucleus 0 0.438727681037458 0.9993314743042 0 hPsi_site_1695 iPseU_CNN:0.9993314743042;iRNA_PseU:0 1696 chr19 45207470 45207470 1 + C T rs370890913 45207470 + 45207450 45207490 41 ACGGCCGGGTGCTGGCCAGGCATGGCATCCGCCGGGAGGAG ACGGCCGGGTGCTGGCCAGGTATGGCATCCGCCGGGAGGAG Direct Gain 0 0.970721525109075 0 0.999995470046997 prediction 0.941443050218149 Functional Gain - CEACAM16 ENSG00000213892 CDS Human protein_coding chr19:45207470 chr19:45207470 nonsynonymous SNV 0.393 0 21 hPsi_associated_SNPs_102736 0 0 0 0 1 exosome 0 0.438739269322747 0.999990940093994 0 hPsi_site_1696 iPseU_CNN:0.999990940093994;iRNA_PseU:0 1697 chr17 15932030 15932030 1 + T A rs116722822 15932030 - 15932010 15932050 41 CGAACCAAAAGTATCAGTTTATCAGTCCCACTCACATCCCA CGAACCAAAAGTATCAGTTTTTCAGTCCCACTCACATCCCA Direct Gain 0 0.970712375139817 0 0.896097719669342 prediction 0.941424750279634 Functional Gain - TTC19 ENSG00000011295 UTR3 Human protein_coding chr17:15932030 chr17:15932030 . . 0 21 hPsi_associated_SNPs_102737 1 0 0 0 0 Ribosome 0 0.43871857070577 0.792195439338684 0 hPsi_site_1697 iPseU_CNN:0.792195439338684;iRNA_PseU:0 1698 chr11 55594771 55594771 1 + G A COAD 55594771 - 55594751 55594791 41 GAAGGAACAGCAGGAAGAGGCAGACTCTCAACTCAGGGACA GAAGGAACAGCAGGAAGAGGTAGACTCTCAACTCAGGGACA Direct Gain 0 0.970699590049963 0 0.999996483325958 prediction 0.941399180099926 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55594771 chr11:55594771 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_102738 0 0 0 0 0 unknown 0 0.438718414369919 0.999992966651916 0 hPsi_site_1698 iPseU_CNN:0.999992966651916;iRNA_PseU:0 1699 chr10 47087408 47087408 1 + C T BLCA 47087408 + 47087388 47087428 41 CCGAGTCCTGGCCACTGGCTCACCACCGCACCATCTACACC CCGAGTCCTGGCCACTGGCTTACCACCGCACCATCTACACC Direct Gain 0 0.970693500862014 0 0.999999821186066 prediction 0.941387001724029 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087408 chr10:47087408 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_102739 0 0 0 0 0 unknown 0 0.438954242089099 0.999999642372132 0 hPsi_site_1699 iPseU_CNN:0.999999642372132;iRNA_PseU:0 1700 chr16 70688478 70688478 1 + G A STAD 70688478 - 70688458 70688498 41 AAGGGCCACATCTCCAAAGGCTCATTCCCCAAGGCCACGCC AAGGGCCACATCTCCAAAGGTTCATTCCCCAAGGCCACGCC Direct Gain 0 0.970682249169636 0 0.999862670898438 prediction 0.941364498339273 Functional Gain - IL34 ENSG00000157368 CDS Human protein_coding chr16:70688478 chr16:70688478 synonymous SNV . 0 21 hPsi_associated_SNPs_102740 0 0 0 0 0 exosome 0 0.438719324754469 0.999725341796876 0 hPsi_site_1700 iPseU_CNN:0.999725341796876;iRNA_PseU:0 1701 chr10 69935198 69935198 1 + G T rs548866322 69935198 + 69935178 69935218 41 GGAAAAAAATAACTTTCAGTGATGTCAGACCAAACCAGCAG GGAAAAAAATAACTTTCAGTTATGTCAGACCAAACCAGCAG Direct Gain 0 0.970669905831053 0 0.965235948562622 prediction 0.941339811662106 Functional Gain - MYPN ENSG00000138347 CDS Human protein_coding chr10:69935198 chr10:69935198 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102741 0 0 0 0 1 Cytosol 0 0.438718593024411 0.930471897125244 0 hPsi_site_1701 iPseU_CNN:0.930471897125244;iRNA_PseU:0 1702 chr11 121414362 121414362 1 + C T BLCA 121414362 + 121414342 121414382 41 GGGGAGAAGAGCACTGTCTTCACCATCTTTGGCTCGAACAA GGGGAGAAGAGCACTGTCTTTACCATCTTTGGCTCGAACAA Direct Gain 0 0.970652838706942 0 0.379682213068008 prediction 0.941305677413885 Functional Gain - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121414362 chr11:121414362 synonymous SNV . 0 21 hPsi_associated_SNPs_102742 0 0 1 0 1 Nucleus 0 0.438727023150798 0 0 hPsi_site_1702 iPseU_CNN:0;iRNA_PseU:0 1703 chr20 34435311 34435311 1 + G T BLCA 34435311 + 34435291 34435331 41 AGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCGGCC AGGTCCTTGCTTGCTGGTCTTATTGTCGTTTTTACCCGGCC Direct Gain 0 0.97065201939843 0 0.0133960247039795 prediction 0.941304038796861 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34435311 chr20:34435311 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102743 0 0 1 0 2 Nucleus 0 0.43871857475844 0 0 hPsi_site_1703 iPseU_CNN:0;iRNA_PseU:0 1704 chr16 77225440 77225440 1 + G T rs35193130 77225440 + 77225420 77225460 41 GGGGCGCGGAGGACTTGGAGGACACGCAGTTCCCCAGTGAG GGGGCGCGGAGGACTTGGAGTACACGCAGTTCCCCAGTGAG Direct Gain 0 0.970645586332218 0 0.999988913536072 prediction 0.941291172664436 Functional Gain - MON1B ENSG00000103111 CDS Human protein_coding chr16:77225440 chr16:77225440 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_102744 0 0 1 0 2 Ribosome 0 0.438718592995332 0.999977827072144 0 hPsi_site_1704 iPseU_CNN:0.999977827072144;iRNA_PseU:0 1705 chr4 155665754 155665754 1 + C A UCEC 155665754 - 155665734 155665774 41 AGGATGAGACGCTTGTTGGAGACCACCTTCTGCGTGCGCCC AGGATGAGACGCTTGTTGGATACCACCTTCTGCGTGCGCCC Direct Gain 0 0.970644314104394 0 0.999706387519836 prediction 0.941288628208789 Functional Gain - LRAT ENSG00000121207 CDS Human protein_coding chr4:155665754 chr4:155665754 synonymous SNV . 0 21 hPsi_associated_SNPs_102745 0 0 0 0 0 Nucleus 0 0.438843212220102 0.999412775039672 0 hPsi_site_1705 iPseU_CNN:0.999412775039672;iRNA_PseU:0 1706 chr22 17589928 17589928 1 + G A rs28376631 17589928 - 17589908 17589948 41 CGGAGGCAGCAGTGGCTCCTCAAACACCTCTTCGTCCAGGG CGGAGGCAGCAGTGGCTCCTTAAACACCTCTTCGTCCAGGG Direct Gain 0 0.970630793221229 0 0.999996423721313 prediction 0.941261586442457 Functional Gain - IL17RA ENSG00000177663 CDS Human protein_coding chr22:17589928 chr22:17589928 nonsynonymous SNV 0.619 0 21 hPsi_associated_SNPs_102746 0 0 0 0 0 Endoplasmic reticulum 0 0.438714652636597 0.999992847442626 0 hPsi_site_1706 iPseU_CNN:0.999992847442626;iRNA_PseU:0 1707 chr7 149522395 149522395 1 + C T BLCA 149522395 + 149522375 149522415 41 GAGGCCCAAGACACTGTATTCACCCTGGACTGTGCCAACCA GAGGCCCAAGACACTGTATTTACCCTGGACTGTGCCAACCA Direct Gain 0 0.970603117654995 0 0.999947547912598 prediction 0.941206235309989 Functional Gain - SSPO ENSG00000197558 ncRNA_exonic Human protein_coding chr7:149522395 chr7:149522395 . . 0 21 hPsi_associated_SNPs_102747 0 0 0 3 3 chromatin 0 0.438717583625934 0.999895095825196 0 hPsi_site_1707 iPseU_CNN:0.999895095825196;iRNA_PseU:0 1708 chrX 46940133 46940133 1 + G A rs185188660 46940133 - 46940113 46940153 41 CCCTCTGGGTGTCTGCAGGGCACCTTCTGCTCCCCCACCTT CCCTCTGGGTGTCTGCAGGGTACCTTCTGCTCCCCCACCTT Direct Gain 0 0.970567289612098 0 0.99990713596344 prediction 0.941134579224196 Functional Gain - RGN ENSG00000130988 UTR5 Human protein_coding chrX:46940133 chrX:46940133 . . 0 21 hPsi_associated_SNPs_102748 0 0 0 0 0 Cytosol 0 0.438719402960007 0.99981427192688 0 hPsi_site_1708 iPseU_CNN:0.99981427192688;iRNA_PseU:0 1709 chr20 31374350 31374350 1 + C T rs559899499 31374350 + 31374330 31374370 41 GTGTCTCCAGCCGGGAGAGGCACAGGCCTTCCCCACGTTCC GTGTCTCCAGCCGGGAGAGGTACAGGCCTTCCCCACGTTCC Direct Gain 0 0.970561561553405 0 0.999881625175476 prediction 0.94112312310681 Functional Gain - DNMT3B ENSG00000088305 CDS Human protein_coding chr20:31374350 chr20:31374350 nonsynonymous SNV 0.678 1 21 hPsi_associated_SNPs_102749 0 0 0 0 1 chromatin 0 0.436760978695575 0.999763250350952 0 hPsi_site_1709 iPseU_CNN:0.999763250350952;iRNA_PseU:0 1710 chr3 183824454 183824454 1 + C A LUAD 183824454 - 183824434 183824474 41 TTCCAGAGGCATATGACGGTGATGATAGAGGAGGCCATGAA TTCCAGAGGCATATGACGGTTATGATAGAGGAGGCCATGAA Direct Gain 0 0.970560455140173 0 0.969302535057068 prediction 0.941120910280347 Functional Gain - HTR3E ENSG00000186038 CDS Human protein_coding chr3:183824454 chr3:183824454 synonymous SNV . 0 21 hPsi_associated_SNPs_102750 0 0 0 0 0 unknown 0 0.4386104619652 0.938605070114136 0 hPsi_site_1710 iPseU_CNN:0.938605070114136;iRNA_PseU:0 1711 chr12 54394284 54394284 1 + C T rs34079606 54394284 + 54394264 54394304 41 GAGCCGCTGTCCGGCGCCGTCTCCTTCCCCAGCTTCCCGGC GAGCCGCTGTCCGGCGCCGTTTCCTTCCCCAGCTTCCCGGC Direct Gain 0 0.970541262147752 0 0.998075246810913 prediction 0.941082524295503 Functional Gain - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394284 chr12:54394284 synonymous SNV . 0 21 hPsi_associated_SNPs_102751 0 0 1 0 0 chromatin 0 0.43854893002983 0.996150493621826 0 hPsi_site_1711 iPseU_CNN:0.996150493621826;iRNA_PseU:0 1712 chr7 30921895 30921895 1 + G T LUSC 30921895 + 30921875 30921915 41 TGCAGCCGGGGCTCCTGCGTGACTGGAGGACTGAGAGGCTC TGCAGCCGGGGCTCCTGCGTTACTGGAGGACTGAGAGGCTC Direct Gain 0 0.970536250149615 0 0.999530851840973 prediction 0.94107250029923 Functional Gain - MINDY4 ENSG00000106125;ENSG00000240583;ENSG00000250424 CDS Human other chr7:30921895 chr7:30921895 nonsynonymous SNV 0.414 4 21 hPsi_associated_SNPs_102752 0 0 0 0 2 unknown 0 0.438211097454575 0.999061703681946 0 hPsi_site_1712 iPseU_CNN:0.999061703681946;iRNA_PseU:0 1713 chr10 50530608 50530608 1 + G A SKCM 50530608 - 50530588 50530628 41 CTGAACGCGTCTGTGCACTTCTTATTTCCTTGCATCATCTG CTGAACGCGTCTGTGCACTTTTTATTTCCTTGCATCATCTG Direct Gain 0 0.970503489545797 0 0.993588447570801 prediction 0.941006979091593 Functional Gain - C10orf71 ENSG00000177354 CDS Human protein_coding chr10:50530608 chr10:50530608 synonymous SNV . 0 21 hPsi_associated_SNPs_102753 0 0 0 0 0 chromatin 0 0.438718224583689 0.987176895141602 0 hPsi_site_1713 iPseU_CNN:0.987176895141602;iRNA_PseU:0 1714 chr11 89896501 89896501 1 + C A LUSC 89896501 - 89896481 89896521 41 AAATACCCAGGAGTCCCGGTGACCTCCCAGAATAACATACC AAATACCCAGGAGTCCCGGTTACCTCCCAGAATAACATACC Direct Gain 0 0.970503174758133 0 0.999997854232788 prediction 0.941006349516265 Functional Gain - NAALAD2 ENSG00000077616 CDS Human protein_coding chr11:89896501 chr11:89896501 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_102754 0 0 0 0 0 insoluble cytoplasm 0 0.438715647675185 0.999995708465576 0 hPsi_site_1714 iPseU_CNN:0.999995708465576;iRNA_PseU:0 1715 chr20 31022910 31022910 1 + G T rs143594454 31022910 + 31022890 31022930 41 GCACCACTTCCTGGGAAAGTGATGATGAGGAGCAAGGACCC GCACCACTTCCTGGGAAAGTTATGATGAGGAGCAAGGACCC Direct Gain 0 0.970492911531429 0 0.999928832054138 prediction 0.940985823062858 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022910 chr20:31022910 nonsynonymous SNV 0.176 1 21 hPsi_associated_SNPs_102755 2 0 1 0 0 Nucleus 0 0.43870748577237 0.999857664108276 0 hPsi_site_1715 iPseU_CNN:0.999857664108276;iRNA_PseU:0 1716 chr1 12089335 12089335 1 + G A LUSC 12089335 - 12089315 12089355 41 CGAGGGCCCGCACTCACATTCATGGTCTTCCTCCACGCCGC CGAGGGCCCGCACTCACATTTATGGTCTTCCTCCACGCCGC Direct Gain 0 0.970482868019062 0 0.998241305351257 prediction 0.940965736038124 Functional Gain - MIIP ENSG00000116691 CDS Human protein_coding chr1:12089335 chr1:12089335 nonsynonymous SNV 0.915 0 21 hPsi_associated_SNPs_102756 0 0 0 0 0 chromatin 0 0.438718605988782 0.996482610702514 0 hPsi_site_1716 iPseU_CNN:0.996482610702514;iRNA_PseU:0 1717 chr9 79118237 79118237 1 + G A DLBC 79118237 - 79118217 79118257 41 CTCATCAGGGCTGTATGTGTCTTGTGCCCACTCCATCAACT CTCATCAGGGCTGTATGTGTTTTGTGCCCACTCCATCAACT Direct Gain 0 0.970477972067717 0 0.304667383432388 prediction 0.940955944135434 Functional Gain - GCNT1 ENSG00000187210 CDS Human protein_coding chr9:79118237 chr9:79118237 nonsynonymous SNV 0.983 4 21 hPsi_associated_SNPs_102757 0 0 0 0 0 exosome 0 0.438775667762608 0 0 hPsi_site_1717 iPseU_CNN:0;iRNA_PseU:0 1718 chr12 56478817 56478817 1 + G A BLCA 56478817 - 56478797 56478837 41 GGTAGAGTAGAGAATTCATTCATGGCCACGAGGACATAGCC GGTAGAGTAGAGAATTCATTTATGGCCACGAGGACATAGCC Direct Gain 0 0.970477661252193 0 0.999906063079834 prediction 0.940955322504386 Functional Gain - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56478817 chr12:56478817 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_102758 0 0 0 0 0 Cytosol 0 0.438718593365185 0.999812126159668 0 hPsi_site_1718 iPseU_CNN:0.999812126159668;iRNA_PseU:0 1719 chr14 23945265 23945265 1 + G A HNSC 23945265 - 23945245 23945285 41 AGACTGGTCATCTTCTGCTTCATCTTCCTCCTCATCCTCAG AGACTGGTCATCTTCTGCTTTATCTTCCTCCTCATCCTCAG Direct Gain 0 0.970472966129488 0 0.934883236885071 prediction 0.940945932258977 Functional Gain - NGDN ENSG00000129460 CDS Human protein_coding chr14:23945265 chr14:23945265 nonsynonymous SNV 0.360 1 21 hPsi_associated_SNPs_102759 0 0 0 0 0 Cytosol 0 0.438299027838936 0.869766473770142 0 hPsi_site_1719 iPseU_CNN:0.869766473770142;iRNA_PseU:0 1720 chr19 7584149 7584149 1 + C T BLCA 7584149 + 7584129 7584169 41 ATGCGGCGCTCAGTCCTGGTCAGGAACCCAGGCCACAAAGG ATGCGGCGCTCAGTCCTGGTTAGGAACCCAGGCCACAAAGG Direct Gain 0 0.970466041199021 0 0.950513541698456 prediction 0.940932082398043 Functional Gain - ZNF358 ENSG00000198816;ENSG00000267952 CDS Human other chr19:7584149 chr19:7584149 nonsynonymous SNV 0.723 0 21 hPsi_associated_SNPs_102760 0 0 1 0 1 Cytosol 0 0.44023832110261 0.901027083396912 0 hPsi_site_1720 iPseU_CNN:0.901027083396912;iRNA_PseU:0 1721 chr19 43866347 43866347 1 + G A STAD 43866347 - 43866327 43866367 41 AGAGGCAGGAGGCTGCACATCACGCTTCTCACGCGCAGAGA AGAGGCAGGAGGCTGCACATTACGCTTCTCACGCGCAGAGA Direct Gain 0 0.970431138942223 0 0.99837064743042 prediction 0.940862277884447 Functional Gain - CD177 ENSG00000204936 CDS Human protein_coding chr19:43866347 chr19:43866347 unknown 0.002 0 21 hPsi_associated_SNPs_102761 0 0 0 0 0 exosome 0 0.438700680257427 0.99674129486084 0 hPsi_site_1721 iPseU_CNN:0.99674129486084;iRNA_PseU:0 1722 chr9 84531040 84531040 1 + G A COAD 84531040 - 84531020 84531060 41 AATGCCTCTGATTGTTGGGGCACATGTGGATGATCCACCAG AATGCCTCTGATTGTTGGGGTACATGTGGATGATCCACCAG Direct Gain 0 0.97042459843104 0 0.998356282711029 prediction 0.94084919686208 Functional Gain - SPATA31D5P ENSG00000240632 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:84531040 chr9:84531040 . . 0 21 hPsi_associated_SNPs_102762 0 0 0 0 0 unknown 0 0.438807370290004 0.996712565422058 0 hPsi_site_1722 iPseU_CNN:0.996712565422058;iRNA_PseU:0 1723 chr12 109954657 109954657 1 + C T BLCA 109954657 + 109954637 109954677 41 CTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCC CTGCCTCCCCGCATGTCACTTACATCACCATCCGCCGGTCC Direct Gain 0 0.970393597315811 0 0.999927878379822 prediction 0.940787194631622 Functional Gain - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109954657 chr12:109954657 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_102763 0 0 1 0 2 Cytosol 0 0.442160999345118 0.999855756759644 0 hPsi_site_1723 iPseU_CNN:0.999855756759644;iRNA_PseU:0 1724 chr19 55045015 55045015 1 + G A LUSC 55045015 - 55044995 55045035 41 TGGGAATGACAGGAGAGAGTCACACGTCCTCCTAGGGGAAC TGGGAATGACAGGAGAGAGTTACACGTCCTCCTAGGGGAAC Direct Gain 0 0.970388027114866 0 0.15799480676651 prediction 0.940776054229732 Functional Gain - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55045015 chr19:55045015 synonymous SNV . 0 21 hPsi_associated_SNPs_102764 0 0 0 0 0 Nucleus 0 0.447591908631441 0 0 hPsi_site_1724 iPseU_CNN:0;iRNA_PseU:0 1725 chr17 6690183 6690183 1 + T A STAD 6690183 - 6690163 6690203 41 GAAAGCCCAGATTTTGAAGTAAAACAACTTCCTGCAGGATA GAAAGCCCAGATTTTGAAGTTAAACAACTTCCTGCAGGATA Direct Gain 0 0.970367705631312 0 0.99432635307312 prediction 0.940735411262624 Functional Gain - FBXO39 ENSG00000177294 CDS Human protein_coding chr17:6690183 chr17:6690183 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_102765 0 0 0 0 0 exosome 0 0.438718150264739 0.98865270614624 0 hPsi_site_1725 iPseU_CNN:0.98865270614624;iRNA_PseU:0 1726 chr1 55352686 55352686 1 + C T UCEC 55352686 + 55352666 55352706 41 AGAGCGGCAGGAGGAAGAGGCACACGAACACCCAGCGCTGG AGAGCGGCAGGAGGAAGAGGTACACGAACACCCAGCGCTGG Direct Gain 0 0.970356986718757 0 1 prediction 0.940713973437513 Functional Gain - DHCR24 ENSG00000116133 CDS Human protein_coding chr1:55352686 chr1:55352686 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_102766 0 0 0 0 0 Endoplasmic reticulum 0 0.438740663804982 1 0 hPsi_site_1726 iPseU_CNN:1;iRNA_PseU:0 1727 chr3 46401302 46401302 1 + C A LUAD 46401302 - 46401282 46401322 41 CTTCAGGGGCTCTGCCAATTGACTTTCCTTTTCCACGACCA CTTCAGGGGCTCTGCCAATTTACTTTCCTTTTCCACGACCA Direct Gain 0 0.970351538598306 0 0.99938976764679 prediction 0.940703077196613 Functional Gain - CCR2 ENSG00000121807 CDS Human protein_coding chr3:46401302 chr3:46401302 stopgain 0.000 0 21 hPsi_associated_SNPs_102767 0 0 0 0 0 exosome 0 0.438722768158597 0.99877953529358 0 hPsi_site_1727 iPseU_CNN:0.99877953529358;iRNA_PseU:0 1728 chr1 186948491 186948491 1 + G T LIHC 186948491 + 186948471 186948511 41 AGAAAGAAATCGCTGACTTTGATATTTTTGATGACCCAGAA AGAAAGAAATCGCTGACTTTTATATTTTTGATGACCCAGAA Direct Gain 0 0.97034776185847 0 0.00144305825233459 prediction 0.940695523716941 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186948491 chr1:186948491 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102768 0 0 0 0 1 Nucleus 0 0.438718589467419 0 0 hPsi_site_1728 iPseU_CNN:0;iRNA_PseU:0 1729 chr12 101680273 101680273 1 + G A rs142220773 101680273 - 101680253 101680293 41 GGTTACCTGTATATACTGGACATGTCCTTCACCATCAGTCT GGTTACCTGTATATACTGGATATGTCCTTCACCATCAGTCT Direct Gain 0 0.970327458485338 0 0.863219857215881 prediction 0.940654916970676 Functional Gain - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101680273 chr12:101680273 nonsynonymous SNV 0.980 0 21 hPsi_associated_SNPs_102769 0 0 0 0 0 Cytosol 0 0.438720769993116 0.726439714431762 0 hPsi_site_1729 iPseU_CNN:0.726439714431762;iRNA_PseU:0 1730 chr21 35562116 35562116 1 + G A rs567091775 35562116 - 35562096 35562136 41 GGGAAGCAAGACACCTTCTTCACAAGGCCACAAGGCAGCAG GGGAAGCAAGACACCTTCTTTACAAGGCCACAAGGCAGCAG Direct Gain 0 0.970314317571502 0 0.999952077865601 prediction 0.940628635143004 Functional Gain - LINC00310 ENSG00000227456 ncRNA_exonic Human lincRNA chr21:35562116 chr21:35562116 . . 0 21 hPsi_associated_SNPs_102770 0 0 0 0 0 unknown 0 0.438718566837414 0.999904155731202 0 hPsi_site_1730 iPseU_CNN:0.999904155731202;iRNA_PseU:0 1731 chr10 65225244 65225244 1 + G A rs1061259 65225244 - 65225224 65225264 41 GGACCTGGCGGTAAGAGAGTCAGCGCCCCCCTTTTCCCCTG GGACCTGGCGGTAAGAGAGTTAGCGCCCCCCTTTTCCCCTG Direct Gain 0 0.970305992373482 0 0.480333745479584 prediction 0.940611984746963 Functional Gain - JMJD1C-AS1 ENSG00000272767 ncRNA_exonic Human antisense chr10:65225244 chr10:65225244 . . 0 21 hPsi_associated_SNPs_102771 0 0 0 0 0 unknown 0 0.43871859297178 0 0 hPsi_site_1731 iPseU_CNN:0;iRNA_PseU:0 1732 chr2 228786229 228786229 1 + G A SKCM 228786229 - 228786209 228786249 41 GAAAGCACATGAAAAGATTTCATCAGTGTGCCCCTCAAGAA GAAAGCACATGAAAAGATTTTATCAGTGTGCCCCTCAAGAA Direct Gain 0 0.970299676490537 0 0.658745586872101 prediction 0.940599352981074 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228786229 chr2:228786229 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_102772 0 0 0 0 0 exosome 0 0.438708320451286 0.317491173744202 0 hPsi_site_1732 iPseU_CNN:0.317491173744202;iRNA_PseU:0 1733 chr15 85147365 85147365 1 + G A UCEC 85147365 - 85147345 85147385 41 GCACCCTGTGGTCCCCTGGTCACCTCCTCCTGGGGGCCGCC GCACCCTGTGGTCCCCTGGTTACCTCCTCCTGGGGGCCGCC Direct Gain 0 0.970282498843059 0 0.985328614711761 prediction 0.940564997686119 Functional Gain - ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85147365 chr15:85147365 synonymous SNV . 0 21 hPsi_associated_SNPs_102773 0 0 0 0 0 Nucleus 0 0.438718620459031 0.970657229423522 0 hPsi_site_1733 iPseU_CNN:0.970657229423522;iRNA_PseU:0 1734 chr2 71795313 71795313 1 + G A UCEC 71795313 - 71795293 71795333 41 CCAACAAGGGCCAACTTAGTCTCGTTCTCATACTGGAGGGC CCAACAAGGGCCAACTTAGTTTCGTTCTCATACTGGAGGGC Direct Gain 0 0.970274560056981 0 0.999207258224487 prediction 0.940549120113963 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71795313 chr2:71795313 synonymous SNV . 0 21 hPsi_associated_SNPs_102774 0 0 0 0 0 Nucleus 0 0.438718593135655 0.998414516448974 0 hPsi_site_1734 iPseU_CNN:0.998414516448974;iRNA_PseU:0 1735 chr8 77767540 77767540 1 + C A LUSC 77767540 - 77767520 77767560 41 ATCAAAATCGGTTTTATTTTGATCATACCCAGCCTCAGCAG ATCAAAATCGGTTTTATTTTTATCATACCCAGCCTCAGCAG Direct Gain 0 0.970254300208985 0 0.980053424835205 prediction 0.940508600417969 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77767540 chr8:77767540 nonsynonymous SNV 0.745 1 21 hPsi_associated_SNPs_102775 0 0 0 0 0 Ribosome 0 0.438718022574288 0.96010684967041 0 hPsi_site_1735 iPseU_CNN:0.96010684967041;iRNA_PseU:0 1736 chr20 53267285 53267285 1 + C A rs114025120 53267285 - 53267265 53267305 41 ACAATAGAAAATCATTTCGTGACATTGACTTCTTTCTGTCC ACAATAGAAAATCATTTCGTTACATTGACTTCTTTCTGTCC Direct Gain 0 0.970228545055652 0 0.99999725818634 prediction 0.940457090111304 Functional Gain - DOK5 ENSG00000101134 UTR3 Human protein_coding chr20:53267285 chr20:53267285 . . 0 21 hPsi_associated_SNPs_102776 0 0 0 0 0 exosome 0 0.439052157507185 0.99999451637268 0 hPsi_site_1736 iPseU_CNN:0.99999451637268;iRNA_PseU:0 1737 chr11 5687299 5687299 1 + C T COAD 5687299 + 5687279 5687319 41 GTTTCTGGCTTCTTCAAGGTCACGTTCTCCGTCCTAAGAAT GTTTCTGGCTTCTTCAAGGTTACGTTCTCCGTCCTAAGAAT Direct Gain 0 0.970211847032649 0 0.999991774559021 prediction 0.940423694065297 Functional Gain - TRIM5 ENSG00000132256 CDS Human protein_coding chr11:5687299 chr11:5687299 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_102777 0 0 0 1 0 Nucleus 0 0.439339978443973 0.999983549118042 0 hPsi_site_1737 iPseU_CNN:0.999983549118042;iRNA_PseU:0 1738 chr9 135947083 135947083 1 + G A BLCA 135947083 - 135947063 135947103 41 GGGGGGCACAGGGGCAGCCTCAGAGTCACCCGTGGGGGGCA GGGGGGCACAGGGGCAGCCTTAGAGTCACCCGTGGGGGGCA Direct Gain 0 0.970200435010358 0 0.99958324432373 prediction 0.940400870020716 Functional Gain - CEL ENSG00000170835 CDS Human protein_coding chr9:135947083 chr9:135947083 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102778 0 0 0 0 0 exosome 0 0.438718592976297 0.99916648864746 0 hPsi_site_1738 iPseU_CNN:0.99916648864746;iRNA_PseU:0 1739 chr4 183603056 183603056 1 + G A CESC 183603056 - 183603036 183603076 41 ACACATGGTCTTCAGTATTTCACAATTGCTACCTCCCCATC ACACATGGTCTTCAGTATTTTACAATTGCTACCTCCCCATC Direct Gain 0 0.970195581906899 0 0.997532725334167 prediction 0.940391163813798 Functional Gain - TENM3 ENSG00000218336 CDS Human protein_coding chr4:183603056 chr4:183603056 nonsynonymous SNV 0.902 1 21 hPsi_associated_SNPs_102779 0 0 0 0 0 nucleus 0 0.438718863344438 0.995065450668334 0 hPsi_site_1739 iPseU_CNN:0.995065450668334;iRNA_PseU:0 1740 chr22 37333986 37333986 1 + C A LUSC 37333986 - 37333966 37334006 41 AATACCAGGTCTGCAGAGGAGACATAACCAGAGGCCACTCC AATACCAGGTCTGCAGAGGATACATAACCAGAGGCCACTCC Direct Gain 0 0.970177340773889 0 0.999955534934998 prediction 0.940354681547777 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37333986 chr22:37333986 synonymous SNV . 0 21 hPsi_associated_SNPs_102780 0 0 0 0 0 Endoplasmic reticulum 0 0.438716946837458 0.999911069869996 0 hPsi_site_1740 iPseU_CNN:0.999911069869996;iRNA_PseU:0 1741 chr2 31467185 31467185 1 + G A LUSC 31467185 - 31467165 31467205 41 ATGAAGGAGTCTGTGGTGGGCTCAGGCCCAATCCTCATGCC ATGAAGGAGTCTGTGGTGGGTTCAGGCCCAATCCTCATGCC Direct Gain 0 0.970174756869263 0 0.482695817947388 prediction 0.940349513738526 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31467185 chr2:31467185 synonymous SNV . 0 21 hPsi_associated_SNPs_102781 0 0 0 0 0 exosome 0 0.438718592991182 0 0 hPsi_site_1741 iPseU_CNN:0;iRNA_PseU:0 1742 chr20 34505570 34505570 1 + G A HNSC 34505570 - 34505550 34505590 41 GCCTACCTGAATCATGAAGTCATTTTCCTCCTGGACCTCAC GCCTACCTGAATCATGAAGTTATTTTCCTCCTGGACCTCAC Direct Gain 0 0.970150024149455 0 0.999797701835632 prediction 0.94030004829891 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34505570 chr20:34505570 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102782 0 0 0 0 0 Nucleus 0 0.438671351445487 0.999595403671264 0 hPsi_site_1742 iPseU_CNN:0.999595403671264;iRNA_PseU:0 1743 chr12 56428881 56428881 1 + C T LGG 56428881 + 56428861 56428901 41 CAGGAGGGGTTATTGCGGGGCACCCCAGGCCCCTCCAAGGA CAGGAGGGGTTATTGCGGGGTACCCCAGGCCCCTCCAAGGA Direct Gain 0 0.970137180183254 0 0.988036274909973 prediction 0.940274360366508 Functional Gain - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428881 chr12:56428881 synonymous SNV . 0 21 hPsi_associated_SNPs_102783 0 0 0 0 0 Cytosol 0 0.438718592995102 0.976072549819946 0 hPsi_site_1743 iPseU_CNN:0.976072549819946;iRNA_PseU:0 1744 chr7 48563938 48563938 1 + G T UCEC 48563938 + 48563918 48563958 41 TTGAAGGAAGGACCAATGGAGACATTCTTGTGTTATACAAC TTGAAGGAAGGACCAATGGATACATTCTTGTGTTATACAAC Direct Gain 0 0.970129873480119 0 0.99999988079071 prediction 0.940259746960238 Functional Gain - ABCA13 ENSG00000179869 CDS Human protein_coding chr7:48563938 chr7:48563938 nonsynonymous SNV 0.771 5 21 hPsi_associated_SNPs_102784 0 0 0 1 2 Nucleus 0 0.438698412432544 0.99999976158142 0 hPsi_site_1744 iPseU_CNN:0.99999976158142;iRNA_PseU:0 1745 chr2 97217855 97217855 1 + C T LUSC 97217855 + 97217835 97217875 41 CTCCCCTTCAGCCCCCTGGTCATCCCGGCCTTCCCGGCCCA CTCCCCTTCAGCCCCCTGGTTATCCCGGCCTTCCCGGCCCA Direct Gain 0 0.970127693432484 0 0.916055679321289 prediction 0.940255386864968 Functional Gain - ARID5A ENSG00000196843 CDS Human protein_coding chr2:97217855 chr2:97217855 synonymous SNV . 0 21 hPsi_associated_SNPs_102785 0 0 0 0 0 Cytosol 0 0.438718593066442 0.832111358642578 0 hPsi_site_1745 iPseU_CNN:0.832111358642578;iRNA_PseU:0 1746 chr12 94648654 94648654 1 + G T UCEC 94648654 + 94648634 94648674 41 GAAAGCGAGCTCCGGAAAGAGATACGTGACGGTAGGCTCCA GAAAGCGAGCTCCGGAAAGATATACGTGACGGTAGGCTCCA Direct Gain 0 0.970120600744609 0 0.972325801849365 prediction 0.940241201489217 Functional Gain - PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94648654 chr12:94648654 nonsynonymous SNV 0.953 1 21 hPsi_associated_SNPs_102786 0 0 0 0 2 chromatin 0 0.438405408807197 0.94465160369873 0 hPsi_site_1746 iPseU_CNN:0.94465160369873;iRNA_PseU:0 1747 chr19 44501429 44501429 1 + C T BLCA 44501429 + 44501409 44501449 41 GGGCCTCAAGTATTTTGAATCATAAGAGACTCCACTGCCAG GGGCCTCAAGTATTTTGAATTATAAGAGACTCCACTGCCAG Direct Gain 0 0.970096753488363 0 0.999452948570251 prediction 0.940193506976726 Functional Gain - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44501429 chr19:44501429 nonsynonymous SNV 0.046 3 21 hPsi_associated_SNPs_102787 0 0 1 0 0 cytosol 0 0.43869224235941 0.998905897140502 0 hPsi_site_1747 iPseU_CNN:0.998905897140502;iRNA_PseU:0 1748 chr14 104573199 104573199 1 + G A COAD 104573199 - 104573179 104573219 41 CGCCTGCAGCGCCTCCACGTCACCGGCGTGGGCAGCAGCAC CGCCTGCAGCGCCTCCACGTTACCGGCGTGGGCAGCAGCAC Direct Gain 0 0.970059622906876 0 0.999928116798401 prediction 0.940119245813751 Functional Gain - ASPG ENSG00000166183 CDS Human protein_coding chr14:104573199 chr14:104573199 nonsynonymous SNV 0.017 0 21 hPsi_associated_SNPs_102788 0 0 0 0 0 exosome 0 0.429299520715455 0.999856233596802 0 hPsi_site_1748 iPseU_CNN:0.999856233596802;iRNA_PseU:0 1749 chr7 146829579 146829579 1 + G A BLCA 146829579 - 146829559 146829599 41 GAGGAAATATCGATTTGGCTCATCTTGGTCTGTGTGATGTT GAGGAAATATCGATTTGGCTTATCTTGGTCTGTGTGATGTT Direct Gain 0 0.970056679794416 0 0.999179899692535 prediction 0.940113359588832 Functional Gain - CNTNAP2 ENSG00000174469 CDS Human protein_coding chr7:146829579 chr7:146829579 nonsynonymous SNV 0.908 0 21 hPsi_associated_SNPs_102789 0 0 0 0 0 Ribosome 0 0.438116399403289 0.99835979938507 0 hPsi_site_1749 iPseU_CNN:0.99835979938507;iRNA_PseU:0 1750 chr4 88534101 88534101 1 + G A SKCM 88534101 - 88534081 88534121 41 ATCACCAGAACCCTCGTCTTCATCCTCATCTGCTCCATTCC ATCACCAGAACCCTCGTCTTTATCCTCATCTGCTCCATTCC Direct Gain 0 0.970055146389631 0 0.983315646648407 prediction 0.940110292779262 Functional Gain - DSPP ENSG00000152591 CDS Human protein_coding chr4:88534101 chr4:88534101 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_102790 0 0 0 0 0 exosome 0 0.438718531243038 0.966631293296814 0 hPsi_site_1750 iPseU_CNN:0.966631293296814;iRNA_PseU:0 1751 chr6 148840808 148840808 1 + G A SARC 148840808 - 148840788 148840828 41 TGGAGACGTGGTGAGAGAGTCTGAGTCATCTTCGGGAGGTT TGGAGACGTGGTGAGAGAGTTTGAGTCATCTTCGGGAGGTT Direct Gain 0 0.970026250408131 0 0.901055932044983 prediction 0.940052500816262 Functional Gain - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148840808 chr6:148840808 nonsynonymous SNV 0.976 2 21 hPsi_associated_SNPs_102791 0 0 0 0 0 Cytosol 0 0.441004487738137 0.802111864089966 0 hPsi_site_1751 iPseU_CNN:0.802111864089966;iRNA_PseU:0 1752 chr16 30778146 30778146 1 + G A CESC 30778146 - 30778126 30778166 41 AAACTCGATGCGCAGCATCTCATACTCCTTGCGTACCTGGG AAACTCGATGCGCAGCATCTTATACTCCTTGCGTACCTGGG Direct Gain 0 0.970011186197293 0 0.999413847923279 prediction 0.940022372394585 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30778146 chr16:30778146 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_102792 0 0 0 0 0 Ribosome 0 0.438718593314483 0.998827695846558 0 hPsi_site_1752 iPseU_CNN:0.998827695846558;iRNA_PseU:0 1753 chr19 17317576 17317576 1 + C T COAD 17317576 + 17317556 17317596 41 CACAACTCCCTGGAGAGACTCATCTTCCACCTTGTCAAGCA CACAACTCCCTGGAGAGACTTATCTTCCACCTTGTCAAGCA Direct Gain 0 0.970007820993763 0 0.972575545310974 prediction 0.940015641987527 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17317576 chr19:17317576 synonymous SNV . 0 21 hPsi_associated_SNPs_102793 0 0 1 0 0 Nucleus 0 0.438710801754213 0.945151090621948 0 hPsi_site_1753 iPseU_CNN:0.945151090621948;iRNA_PseU:0 1754 chr12 53647351 53647351 1 + G T rs36054910 53647351 + 53647331 53647371 41 GGAGGCCTGCGCTGCCTCCTGTCGGACCGCCGCGTGCTGCT GGAGGCCTGCGCTGCCTCCTTTCGGACCGCCGCGTGCTGCT Direct Gain 0 0.969999064533296 0 0.999956905841827 prediction 0.939998129066591 Functional Gain - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647351 chr12:53647351 synonymous SNV . 0 21 hPsi_associated_SNPs_102794 0 0 1 0 0 Endoplasmic reticulum 0 0.438657637706033 0.999913811683654 0 hPsi_site_1754 iPseU_CNN:0.999913811683654;iRNA_PseU:0 1755 chr16 84024134 84024134 1 + G A COAD 84024134 - 84024114 84024154 41 TCCTTCAGGAGGAAGCGGGTCACAAACTGGTCCACGTTGCT TCCTTCAGGAGGAAGCGGGTTACAAACTGGTCCACGTTGCT Direct Gain 0 0.969998194125569 0 0.995970547199249 prediction 0.939996388251139 Functional Gain - NECAB2 ENSG00000103154 CDS Human protein_coding chr16:84024134 chr16:84024134 synonymous SNV . 0 21 hPsi_associated_SNPs_102795 0 0 0 0 0 exosome 0 0.436871106176468 0.991941094398498 0 hPsi_site_1755 iPseU_CNN:0.991941094398498;iRNA_PseU:0 1756 chr17 42858602 42858602 1 + C T rs547640941 42858602 + 42858582 42858622 41 CGAGGAGGCGTTGTGGAGGGCATCGCCCCCTGTTTATTCAC CGAGGAGGCGTTGTGGAGGGTATCGCCCCCTGTTTATTCAC Direct Gain 0 0.969975544672975 0 0.999624252319336 prediction 0.93995108934595 Functional Gain - ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42858602 chr17:42858602 . . 0 21 hPsi_associated_SNPs_102796 0 0 1 0 0 chromatin 0 0.438716797173143 0.999248504638672 0 hPsi_site_1756 iPseU_CNN:0.999248504638672;iRNA_PseU:0 1757 chr18 29793125 29793125 1 + G A SKCM 29793125 - 29793105 29793145 41 ACCACTCTAAACTTCTTGGTCACTTTCAATGTTACATGATA ACCACTCTAAACTTCTTGGTTACTTTCAATGTTACATGATA Direct Gain 0 0.969974999588364 0 0.999998509883881 prediction 0.939949999176728 Functional Gain - MEP1B ENSG00000141434 CDS Human protein_coding chr18:29793125 chr18:29793125 synonymous SNV . 0 21 hPsi_associated_SNPs_102797 0 0 0 0 0 exosome 0 0.438318364223911 0.999997019767762 0 hPsi_site_1757 iPseU_CNN:0.999997019767762;iRNA_PseU:0 1758 chrX 17080587 17080587 1 + C A UCEC 17080587 - 17080567 17080607 41 AGAATAAGAATCAAATAATTGACAGTCCCATTTGGGCTTAG AGAATAAGAATCAAATAATTTACAGTCCCATTTGGGCTTAG Direct Gain 0 0.969972247972151 0 0.999915659427643 prediction 0.939944495944302 Functional Gain - REPS2 ENSG00000169891 CDS Human protein_coding chrX:17080587 chrX:17080587 nonsynonymous SNV 0.101 0 21 hPsi_associated_SNPs_102798 0 0 0 0 0 Nucleus 0 0.438718526241744 0.999831318855286 0 hPsi_site_1758 iPseU_CNN:0.999831318855286;iRNA_PseU:0 1759 chr1 21887130 21887130 1 + G A SARC 21887130 - 21887110 21887150 41 GTCTCGCCAGTACTTGGGGTCTTTCTCTTTCTCTAAACACA GTCTCGCCAGTACTTGGGGTTTTTCTCTTTCTCTAAACACA Direct Gain 0 0.969946989271249 0 0.301393419504166 prediction 0.939893978542498 Functional Gain - ALPL ENSG00000162551 CDS Human protein_coding chr1:21887130 chr1:21887130 nonsynonymous SNV 0.990 1 21 hPsi_associated_SNPs_102799 0 0 0 0 0 Endoplasmic reticulum 0 0.438718587095102 0 0 hPsi_site_1759 iPseU_CNN:0;iRNA_PseU:0 1760 chr7 99795746 99795746 1 + G A LUAD 99795746 - 99795726 99795766 41 GACAGCCTCCACTGCCACATCATACTCTCTGTCCATGACCA GACAGCCTCCACTGCCACATTATACTCTCTGTCCATGACCA Direct Gain 0 0.96993968895203 0 0.915364503860474 prediction 0.939879377904061 Functional Gain - STAG3 ENSG00000066923 CDS Human protein_coding chr7:99795746 chr7:99795746 nonsynonymous SNV 0.964 1 21 hPsi_associated_SNPs_102800 0 0 0 0 0 exosome 0 0.444153405343759 0.830729007720948 0 hPsi_site_1760 iPseU_CNN:0.830729007720948;iRNA_PseU:0 1761 chr16 30774794 30774794 1 + C T BLCA 30774794 + 30774774 30774814 41 TGAGAGCCAGGGGGAGCTGTCTTCAGCGCCTGAGGCACCTG TGAGAGCCAGGGGGAGCTGTTTTCAGCGCCTGAGGCACCTG Direct Gain 0 0.969917095467891 0 0.999587416648865 prediction 0.939834190935781 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30774794 chr16:30774794 nonsynonymous SNV 0.973 0 21 hPsi_associated_SNPs_102801 0 0 1 0 2 Ribosome 0 0.438718589990831 0.99917483329773 0 hPsi_site_1761 iPseU_CNN:0.99917483329773;iRNA_PseU:0 1762 chr8 39843857 39843857 1 + C A rs60437822 39843857 - 39843837 39843877 41 GATAGAAGCTGAGGTTTGGTGATGGGAGAGGCAACACTGGA GATAGAAGCTGAGGTTTGGTTATGGGAGAGGCAACACTGGA Direct Gain 0 0.969907525063052 0 0.995292603969574 prediction 0.939815050126104 Functional Gain - IDO2 ENSG00000253939 ncRNA_intronic Human antisense chr8:39843857 chr8:39843857 . . 0 21 hPsi_associated_SNPs_102802 0 0 0 0 0 exosome 0 0.438896087045082 0.990585207939148 0 hPsi_site_1762 iPseU_CNN:0.990585207939148;iRNA_PseU:0 1763 chr11 70049296 70049296 1 + G A rs7126976 70049296 - 70049276 70049316 41 GGCGCCGCGGACGGGCGCGGCTTCTGCGCCTGCGCCCGGCG GGCGCCGCGGACGGGCGCGGTTTCTGCGCCTGCGCCCGGCG Direct Gain 0 0.969904070261732 0 0.999984800815582 prediction 0.939808140523463 Functional Gain - FADD ENSG00000168040 UTR5 Human protein_coding chr11:70049296 chr11:70049296 . . 0 21 hPsi_associated_SNPs_102803 0 0 0 0 0 Ribosome 0 0.438720132019042 0.999969601631164 0 hPsi_site_1763 iPseU_CNN:0.999969601631164;iRNA_PseU:0 1764 chr11 111594549 111594549 1 + C T LUAD 111594549 + 111594529 111594569 41 GCAGCAGCAGCCGCCACCGCCACCACCCCCTCCACCACCAC GCAGCAGCAGCCGCCACCGCTACCACCCCCTCCACCACCAC Direct Gain 0 0.969896463060763 0 0.976260125637054 prediction 0.939792926121527 Functional Gain - SIK2 ENSG00000170145 CDS Human protein_coding chr11:111594549 chr11:111594549 nonsynonymous SNV 0.007 2 21 hPsi_associated_SNPs_102804 0 0 0 0 0 Cytosol 0 0.438718395871819 0.952520251274108 0 hPsi_site_1764 iPseU_CNN:0.952520251274108;iRNA_PseU:0 1765 chr1 177250346 177250346 1 + G A SKCM 177250346 - 177250326 177250366 41 ACCTGCAAGGTGTTAATTTTCATGTAACCCAAATTCTTAGA ACCTGCAAGGTGTTAATTTTTATGTAACCCAAATTCTTAGA Direct Gain 0 0.969896351824277 0 0.00201696157455444 prediction 0.939792703648555 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177250346 chr1:177250346 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102805 0 0 0 0 0 Nucleus 0 0.438718583651777 0 0 hPsi_site_1765 iPseU_CNN:0;iRNA_PseU:0 1766 chr10 85965669 85965669 1 + G A LUAD 85965669 - 85965649 85965689 41 GGGTACCTGTACATGCAGCTCATACACCTCTCTCTGGAGCT GGGTACCTGTACATGCAGCTTATACACCTCTCTCTGGAGCT Direct Gain 0 0.96988610825821 0 0.021965354681015 prediction 0.939772216516419 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85965669 chr10:85965669 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_102806 0 0 0 0 0 cytosol 0 0.438592883723158 0 0 hPsi_site_1766 iPseU_CNN:0;iRNA_PseU:0 1767 chr11 1651522 1651522 1 + C T THCA 1651522 + 1651502 1651542 41 GTCCAAGGGGGGCTGTGGTTCTTATGGCTGCTCCCAGTCCA GTCCAAGGGGGGCTGTGGTTTTTATGGCTGCTCCCAGTCCA Direct Gain 0 0.969884992479978 0 0.998586297035217 prediction 0.939769984959956 Functional Gain - KRTAP5-5 ENSG00000185940 CDS Human protein_coding chr11:1651522 chr11:1651522 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_102807 0 0 0 0 0 unknown 0 0.438718592995102 0.997172594070434 0 hPsi_site_1767 iPseU_CNN:0.997172594070434;iRNA_PseU:0 1768 chr3 98251870 98251870 1 + G A SKCM 98251870 - 98251850 98251890 41 GTGAGGTGACTATCTGATGTCTCAGTGCTACTCCCAAAGTC GTGAGGTGACTATCTGATGTTTCAGTGCTACTCCCAAAGTC Direct Gain 0 0.969881563728518 0 0.999764919281006 prediction 0.939763127457035 Functional Gain - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251870 chr3:98251870 synonymous SNV . 0 21 hPsi_associated_SNPs_102808 0 0 0 0 0 exosome 0 0.438718571770248 0.999529838562012 0 hPsi_site_1768 iPseU_CNN:0.999529838562012;iRNA_PseU:0 1769 chr14 73637628 73637628 1 + G A BRCA 73637628 - 73637608 73637648 41 ATATTTCAATGTCAGCTCCTCATCTTCTTCCTCATCTTGCT ATATTTCAATGTCAGCTCCTTATCTTCTTCCTCATCTTGCT Direct Gain 0 0.969879862545043 0 0.996355533599854 prediction 0.939759725090086 Functional Gain - PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637628 chr14:73637628 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_102809 0 0 0 0 0 Ribosome 0 0.438719186461733 0.992711067199708 0 hPsi_site_1769 iPseU_CNN:0.992711067199708;iRNA_PseU:0 1770 chr2 220334094 220334094 1 + G A SKCM 220334094 - 220334074 220334114 41 CCCAGACACGTACACTGTGTCATGCGCCGGTCGTCGCTGCT CCCAGACACGTACACTGTGTTATGCGCCGGTCGTCGCTGCT Direct Gain 0 0.969877351006527 0 0.999675989151001 prediction 0.939754702013054 Functional Gain - SPEG ENSG00000072195 CDS Human protein_coding chr2:220334094 chr2:220334094 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102810 0 0 0 0 0 Nucleus 0 0.436508865089299 0.999351978302002 0 hPsi_site_1770 iPseU_CNN:0.999351978302002;iRNA_PseU:0 1771 chr12 120118103 120118103 1 + C T BLCA 120118103 + 120118083 120118123 41 CGGTACAAGAAGAAGTACGTCACCACCTTGTTATACAAGCC CGGTACAAGAAGAAGTACGTTACCACCTTGTTATACAAGCC Direct Gain 0 0.969877252816459 0 0.995213270187378 prediction 0.939754505632918 Functional Gain - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120118103 chr12:120118103 synonymous SNV . 0 21 hPsi_associated_SNPs_102811 0 0 1 0 1 Ribosome 0 0.438714330301143 0.990426540374756 0 hPsi_site_1771 iPseU_CNN:0.990426540374756;iRNA_PseU:0 1772 chr16 67063313 67063313 1 + G A BRCA 67063313 - 67063293 67063333 41 TGGTCGGGCACGACGCGCGGCATCTTCCCGCCCTGAGGCCG TGGTCGGGCACGACGCGCGGTATCTTCCCGCCCTGAGGCCG Direct Gain 0 0.96987516971825 0 0.999995768070221 prediction 0.939750339436501 Functional Gain - CBFB ENSG00000067955 CDS Human protein_coding chr16:67063313 chr16:67063313 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102812 0 0 0 0 0 Ribosome 0 0.438692984917766 0.999991536140442 0 hPsi_site_1772 iPseU_CNN:0.999991536140442;iRNA_PseU:0 1773 chr16 88504867 88504867 1 + C T COAD 88504867 + 88504847 88504887 41 TCTGAGGGGGGGCCCCGAGGCACCTTCCACAAGGGCAGCGC TCTGAGGGGGGGCCCCGAGGTACCTTCCACAAGGGCAGCGC Direct Gain 0 0.969865656647939 0 0.999999940395355 prediction 0.939731313295879 Functional Gain - ZNF469 ENSG00000225614 CDS Human protein_coding chr16:88504867 chr16:88504867 synonymous SNV . 0 21 hPsi_associated_SNPs_102813 0 0 0 0 0 exosome 0 0.438718595689918 0.99999988079071 0 hPsi_site_1773 iPseU_CNN:0.99999988079071;iRNA_PseU:0 1774 chr14 20344906 20344906 1 + C T SKCM 20344906 + 20344886 20344926 41 ATGCATTCAATGAGTCAGGTCATATTTGCCCTCACGTTACC ATGCATTCAATGAGTCAGGTTATATTTGCCCTCACGTTACC Direct Gain 0 0.969857577882033 0 0.997177124023438 prediction 0.939715155764066 Functional Gain - OR4K2 ENSG00000165762 CDS Human protein_coding chr14:20344906 chr14:20344906 synonymous SNV . 0 21 hPsi_associated_SNPs_102814 0 0 0 0 0 unknown 0 0.438879861956935 0.994354248046876 0 hPsi_site_1774 iPseU_CNN:0.994354248046876;iRNA_PseU:0 1775 chr1 201184746 201184746 1 + G T BLCA 201184746 + 201184726 201184766 41 GCTGGGAAGCCGGTGATAGTGAAGATCCCCTTCCAGAGCCA GCTGGGAAGCCGGTGATAGTTAAGATCCCCTTCCAGAGCCA Direct Gain 0 0.9698422936122 0 0.993967890739441 prediction 0.9396845872244 Functional Gain - IGFN1 ENSG00000163395 CDS Human protein_coding chr1:201184746 chr1:201184746 synonymous SNV . 0 21 hPsi_associated_SNPs_102815 0 0 0 0 1 exosome 0 0.43973796056485 0.987935781478882 0 hPsi_site_1775 iPseU_CNN:0.987935781478882;iRNA_PseU:0 1776 chr8 110099896 110099896 1 + G A LUAD 110099896 - 110099876 110099916 41 GGGTCCTCATGTGCTTGGTTCTCATGACAACCAGGACTACC GGGTCCTCATGTGCTTGGTTTTCATGACAACCAGGACTACC Direct Gain 0 0.969829731918731 0 0.999293982982635 prediction 0.939659463837461 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110099896 chr8:110099896 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102816 0 0 0 0 0 exosome 0 0.438718596120626 0.99858796596527 0 hPsi_site_1776 iPseU_CNN:0.99858796596527;iRNA_PseU:0 1777 chr17 4836835 4836835 1 + C T LUSC 4836835 + 4836815 4836855 41 CGTGCCACAAGGACTGTGGTCAAGTTCCCCACCAAAGCCCA CGTGCCACAAGGACTGTGGTTAAGTTCCCCACCAAAGCCCA Direct Gain 0 0.969812065482442 0 0.917381763458252 prediction 0.939624130964884 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836835 chr17:4836835 synonymous SNV . 0 21 hPsi_associated_SNPs_102817 0 0 0 0 0 exosome 0 0.438718159588311 0.834763526916504 0 hPsi_site_1777 iPseU_CNN:0.834763526916504;iRNA_PseU:0 1778 chr16 21261577 21261577 1 + G A LUSC 21261577 - 21261557 21261597 41 TCCTCTCTGAACACTTCCATCACGTTCCTCTGCCCACTTCT TCCTCTCTGAACACTTCCATTACGTTCCTCTGCCCACTTCT Direct Gain 0 0.96980793912378 0 0.999979376792908 prediction 0.939615878247559 Functional Gain - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21261577 chr16:21261577 synonymous SNV . 0 21 hPsi_associated_SNPs_102818 0 0 0 0 0 exosome 0 0.438719214060732 0.999958753585816 0 hPsi_site_1778 iPseU_CNN:0.999958753585816;iRNA_PseU:0 1779 chr3 183822012 183822012 1 + G A LUAD 183822012 - 183821992 183822032 41 ACTCATCTTCGTGATGCCCTCACATTCCTCTGGGTTCCAGC ACTCATCTTCGTGATGCCCTTACATTCCTCTGGGTTCCAGC Direct Gain 0 0.969792515112246 0 0.996825337409973 prediction 0.939585030224492 Functional Gain - HTR3E ENSG00000186038 CDS Human protein_coding chr3:183822012 chr3:183822012 nonsynonymous SNV 0.603 0 21 hPsi_associated_SNPs_102819 0 0 0 0 0 unknown 0 0.438685687016114 0.993650674819946 0 hPsi_site_1779 iPseU_CNN:0.993650674819946;iRNA_PseU:0 1780 chr12 111336905 111336905 1 + G T UCEC 111336905 + 111336885 111336925 41 GGGAGACGGGGAAAGTCACTGACATCAACCTTCCGCAGTAT GGGAGACGGGGAAAGTCACTTACATCAACCTTCCGCAGTAT Direct Gain 0 0.969775342369883 0 0.886371254920959 prediction 0.939550684739765 Functional Gain - CCDC63 ENSG00000173093 CDS Human protein_coding chr12:111336905 chr12:111336905 nonsynonymous SNV 0.001 4 21 hPsi_associated_SNPs_102820 0 0 0 0 1 exosome 0 0.451274188368324 0.772742509841918 0 hPsi_site_1780 iPseU_CNN:0.772742509841918;iRNA_PseU:0 1781 chr1 109270677 109270677 1 + C T BLCA 109270677 + 109270657 109270697 41 ATGTCATGTACTCCCCAGTTCATAACCACAGGTAAGGCACA ATGTCATGTACTCCCCAGTTTATAACCACAGGTAAGGCACA Direct Gain 0 0.969744018177351 0 0.993684053421021 prediction 0.939488036354701 Functional Gain - FNDC7 ENSG00000143107 CDS Human protein_coding chr1:109270677 chr1:109270677 synonymous SNV . 0 21 hPsi_associated_SNPs_102821 0 0 0 0 1 exosome 0 0.438718593060774 0.987368106842042 0 hPsi_site_1781 iPseU_CNN:0.987368106842042;iRNA_PseU:0 1782 chr13 35615096 35615096 1 + G T UCEC 35615096 + 35615076 35615116 41 GGTGGAGAATTTGACTTGGAGATGAACTTTATTATCCAGGA GGTGGAGAATTTGACTTGGATATGAACTTTATTATCCAGGA Direct Gain 0 0.969735108461932 0 0.997267603874207 prediction 0.939470216923864 Functional Gain - NBEA ENSG00000172915 CDS Human protein_coding chr13:35615096 chr13:35615096 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102822 0 0 0 0 1 Nucleus 0 0.438749705739818 0.994535207748414 0 hPsi_site_1782 iPseU_CNN:0.994535207748414;iRNA_PseU:0 1783 chr2 121732616 121732616 1 + C T LUAD 121732616 + 121732596 121732636 41 AAGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACTGCCA AAGCAGGAGGCTGAGGTGGTTATCTATGAGACCAACTGCCA Direct Gain 0 0.969707528930858 0 0.404194533824921 prediction 0.939415057861716 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121732616 chr2:121732616 synonymous SNV . 0 21 hPsi_associated_SNPs_102823 0 0 0 0 1 Endoplasmic reticulum 0 0.438672532825904 0 0 hPsi_site_1783 iPseU_CNN:0;iRNA_PseU:0 1784 chr22 27067934 27067934 1 + C T UCEC 27067934 + 27067914 27067954 41 ACTTGGCTTTGAATCCATGTCACTTCCCCACATTCTTCCTC ACTTGGCTTTGAATCCATGTTACTTCCCCACATTCTTCCTC Direct Gain 0 0.969701868010755 0 0.998837828636169 prediction 0.93940373602151 Functional Gain - MIAT ENSG00000206028;ENSG00000225783 ncRNA_exonic Human other chr22:27067934 chr22:27067934 . . 0 21 hPsi_associated_SNPs_102824 0 0 1 0 0 unknown 0 0.438718592949897 0.997675657272338 0 hPsi_site_1784 iPseU_CNN:0.997675657272338;iRNA_PseU:0 1785 chr19 12089514 12089514 1 + C A OV 12089514 - 12089494 12089534 41 GAATGCTTTCCCACATTGCTGACATTCATAAGGCTTTTCTC GAATGCTTTCCCACATTGCTTACATTCATAAGGCTTTTCTC Direct Gain 0 0.969683862879841 0 0.992666602134705 prediction 0.939367725759683 Functional Gain - ZNF763 ENSG00000197054;ENSG00000267179 CDS Human other chr19:12089514 chr19:12089514 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102825 0 0 0 0 0 exosome 0 0.438349563698899 0.98533320426941 0 hPsi_site_1785 iPseU_CNN:0.98533320426941;iRNA_PseU:0 1786 chr13 50586202 50586202 1 + G A COAD 50586202 - 50586182 50586222 41 GGTCTCCACAAGGAATTCCGCACACTCCCTTCTAAGATACC GGTCTCCACAAGGAATTCCGTACACTCCCTTCTAAGATACC Direct Gain 0 0.969661784941903 0 0.997046887874603 prediction 0.939323569883805 Functional Gain - TRIM13 ENSG00000204977 CDS Human protein_coding chr13:50586202 chr13:50586202 synonymous SNV . 0 21 hPsi_associated_SNPs_102826 0 0 1 0 0 Endoplasmic reticulum 0 0.438718593004425 0.994093775749206 0 hPsi_site_1786 iPseU_CNN:0.994093775749206;iRNA_PseU:0 1787 chr17 8218749 8218749 1 + G A rs8067778 8218749 - 8218729 8218769 41 AGGTAGGAAGCCTCGGACGTCACCACCTCGAAAAGACTCTA AGGTAGGAAGCCTCGGACGTTACCACCTCGAAAAGACTCTA Direct Gain 0 0.969655379275639 0 0.8511723279953 prediction 0.939310758551279 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8218749 chr17:8218749 synonymous SNV . 0 21 hPsi_associated_SNPs_102827 1 0 0 0 0 exosome 0 0.438719126372067 0.7023446559906 0 hPsi_site_1787 iPseU_CNN:0.7023446559906;iRNA_PseU:0 1788 chr15 48429046 48429046 1 + G A LUSC 48429046 - 48429026 48429066 41 ACGAATGAATGGTTGACCTTCATCTTCCCAGCCCATCAGTG ACGAATGAATGGTTGACCTTTATCTTCCCAGCCCATCAGTG Direct Gain 0 0.969654526147539 0 0.998311936855316 prediction 0.939309052295078 Functional Gain - SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48429046 chr15:48429046 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_102828 0 0 0 0 0 exosome 0 0.438718589662501 0.996623873710632 0 hPsi_site_1788 iPseU_CNN:0.996623873710632;iRNA_PseU:0 1789 chr19 58723852 58723852 1 + C T UCEC 58723852 + 58723832 58723872 41 GCAAACAGTGGCGCTCTTGACACAAACCAAGTTTTGCTCCA GCAAACAGTGGCGCTCTTGATACAAACCAAGTTTTGCTCCA Direct Gain 0 0.969643660801644 0 0.996546506881714 prediction 0.939287321603288 Functional Gain - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58723852 chr19:58723852 synonymous SNV . 0 21 hPsi_associated_SNPs_102829 0 0 0 0 0 chromatin 0 0.440767616695744 0.993093013763428 0 hPsi_site_1789 iPseU_CNN:0.993093013763428;iRNA_PseU:0 1790 chr16 2880751 2880751 1 + G A SKCM 2880751 - 2880731 2880771 41 CACCCGCAGCCCTGTGATTTCATGGTCGTAGTCTTCAGTGG CACCCGCAGCCCTGTGATTTTATGGTCGTAGTCTTCAGTGG Direct Gain 0 0.969634242919218 0 0.415678024291992 prediction 0.939268485838435 Functional Gain - ZG16B ENSG00000162078 CDS Human protein_coding chr16:2880751 chr16:2880751 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102830 0 0 0 0 0 exosome 0 0.438697356791911 0 0 hPsi_site_1790 iPseU_CNN:0;iRNA_PseU:0 1791 chr2 27800654 27800654 1 + G A UCEC 27800654 - 27800634 27800674 41 TGTAGCCATTGCTTACAGGTCAGATTTACAGATTCTGGGAC TGTAGCCATTGCTTACAGGTTAGATTTACAGATTCTGGGAC Direct Gain 0 0.969634159498286 0 0.999881863594055 prediction 0.939268318996573 Functional Gain - C2orf16 ENSG00000221843 CDS Human protein_coding chr2:27800654 chr2:27800654 synonymous SNV . 0 21 hPsi_associated_SNPs_102831 0 0 0 0 0 chromatin 0 0.43875195900427 0.99976372718811 0 hPsi_site_1791 iPseU_CNN:0.99976372718811;iRNA_PseU:0 1792 chr8 67428149 67428149 1 + G A STAD 67428149 - 67428129 67428169 41 AGGGCTGGATACTCTTCAGTCATCTTCTTGAGATGTCTGGA AGGGCTGGATACTCTTCAGTTATCTTCTTGAGATGTCTGGA Direct Gain 0 0.969623711304841 0 0.999959945678711 prediction 0.939247422609683 Functional Gain - C8orf46 ENSG00000169085 CDS Human protein_coding chr8:67428149 chr8:67428149 nonsynonymous SNV 0.889 0 21 hPsi_associated_SNPs_102832 0 0 0 0 0 exosome 0 0.438694439714093 0.999919891357422 0 hPsi_site_1792 iPseU_CNN:0.999919891357422;iRNA_PseU:0 1793 chrX 36008085 36008085 1 + G A rs147042044 36008085 - 36008065 36008105 41 AAAACCATACTGAGTTCTGTCACTTGCCATCACTAAAAGTA AAAACCATACTGAGTTCTGTTACTTGCCATCACTAAAAGTA Direct Gain 0 0.969612800747499 0 0.887206792831421 prediction 0.939225601494998 Functional Gain - CFAP47 ENSG00000165164 UTR3 Human protein_coding chrX:36008085 chrX:36008085 . . 0 21 hPsi_associated_SNPs_102833 0 0 0 0 0 cytosol 0 0.438364042840818 0.774413585662842 0 hPsi_site_1793 iPseU_CNN:0.774413585662842;iRNA_PseU:0 1794 chr5 96248423 96248423 1 + G A SKCM 96248423 - 96248403 96248443 41 AGCACTTGACATTGACAGTTCATATTGCTCTAAAAGGTAAT AGCACTTGACATTGACAGTTTATATTGCTCTAAAAGGTAAT Direct Gain 0 0.969612256418195 0 0.938234090805054 prediction 0.939224512836391 Functional Gain - ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96248423 chr5:96248423 nonsynonymous SNV 0.743 0 21 hPsi_associated_SNPs_102834 0 0 0 0 0 exosome 0 0.438619511495845 0.876468181610108 0 hPsi_site_1794 iPseU_CNN:0.876468181610108;iRNA_PseU:0 1795 chr3 46415026 46415026 1 + C T SKCM 46415026 + 46415006 46415046 41 CTGCCGCTGCTTGTCATGGTCATCTGCTACTCGGGAATCCT CTGCCGCTGCTTGTCATGGTTATCTGCTACTCGGGAATCCT Direct Gain 0 0.969559674440272 0 0.533270716667175 prediction 0.939119348880543 Functional Gain - CCR5 ENSG00000160791 CDS Human protein_coding chr3:46415026 chr3:46415026 synonymous SNV . 0 21 hPsi_associated_SNPs_102835 0 0 0 0 0 exosome 0 0.438719765655718 0.0665414333343499 0 hPsi_site_1795 iPseU_CNN:0.0665414333343499;iRNA_PseU:0 1796 chr17 59115320 59115320 1 + G A BLCA 59115320 - 59115300 59115340 41 CTGAGGGGTCGCGGCTCCATCATGTGTTCCACTAAGGTGCC CTGAGGGGTCGCGGCTCCATTATGTGTTCCACTAAGGTGCC Direct Gain 0 0.969559129213093 0 0.880562901496887 prediction 0.939118258426185 Functional Gain - BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59115320 chr17:59115320 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_102836 0 0 0 0 0 Cytosol 0 0.436260775953261 0.761125802993774 0 hPsi_site_1796 iPseU_CNN:0.761125802993774;iRNA_PseU:0 1797 chr19 53945125 53945125 1 + A T rs144047158 53945125 + 53945105 53945145 41 GGGTGGGCAGCATGGCTGGGATCACCACCATCGAGGCAGTG GGGTGGGCAGCATGGCTGGGTTCACCACCATCGAGGCAGTG Direct Gain 0 0.969557699606022 0 0.999238193035126 prediction 0.939115399212043 Functional Gain - TPM3P9 ENSG00000241015 ncRNA_exonic Human transcribed_processed_pseudogene chr19:53945125 chr19:53945125 . . 0 21 hPsi_associated_SNPs_102837 0 0 1 0 1 unknown 0 0.43885393795564 0.998476386070252 0 hPsi_site_1797 iPseU_CNN:0.998476386070252;iRNA_PseU:0 1798 chr19 58773216 58773216 1 + A T rs567239449 58773216 + 58773196 58773236 41 TGAGTGTGACCTGTGTGGGAAATCCTTCACCCAGAGATCCA TGAGTGTGACCTGTGTGGGATATCCTTCACCCAGAGATCCA Direct Gain 0 0.969534518883661 0 0.997058510780334 prediction 0.939069037767322 Functional Gain - ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773216 chr19:58773216 nonsynonymous SNV 0.954 3 21 hPsi_associated_SNPs_102838 0 0 1 3 0 chromatin 0 0.432912404520638 0.994117021560668 0 hPsi_site_1798 iPseU_CNN:0.994117021560668;iRNA_PseU:0 1799 chr10 121658272 121658272 1 + C T SKCM 121658272 + 121658252 121658292 41 GCCAAGTAGTCTCCCTCCTTCATATTTTGGGAACCAACCCC GCCAAGTAGTCTCCCTCCTTTATATTTTGGGAACCAACCCC Direct Gain 0 0.969490756486709 0 0.998924136161804 prediction 0.938981512973417 Functional Gain - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121658272 chr10:121658272 nonsynonymous SNV 0.878 2 21 hPsi_associated_SNPs_102839 0 0 1 0 0 Nucleus 0 0.438718592731304 0.997848272323608 0 hPsi_site_1799 iPseU_CNN:0.997848272323608;iRNA_PseU:0 1800 chr17 7915566 7915566 1 + C T LUAD 7915566 + 7915546 7915586 41 GAGGGCAACCTGGCTGTGGTCTCAGAGCACTGCACGCGGGG GAGGGCAACCTGGCTGTGGTTTCAGAGCACTGCACGCGGGG Direct Gain 0 0.969474661326822 0 0.999818444252014 prediction 0.938949322653644 Functional Gain - GUCY2D ENSG00000132518 CDS Human protein_coding chr17:7915566 chr17:7915566 synonymous SNV . 0 21 hPsi_associated_SNPs_102840 0 0 0 0 0 exosome 0 0.438010698956149 0.999636888504028 0 hPsi_site_1800 iPseU_CNN:0.999636888504028;iRNA_PseU:0 1801 chr2 61009052 61009052 1 + C T LUAD 61009052 + 61009032 61009072 41 GATAGGTATCATCTCATGCCCATAATCACCCCTGCCTACCC GATAGGTATCATCTCATGCCTATAATCACCCCTGCCTACCC Direct Gain 0 0.969467007993853 0 0.388860583305359 prediction 0.938934015987705 Functional Gain - PAPOLG ENSG00000115421 CDS Human protein_coding chr2:61009052 chr2:61009052 synonymous SNV . 0 21 hPsi_associated_SNPs_102841 0 0 0 0 1 chromatin 0 0.438718592995102 0 0 hPsi_site_1801 iPseU_CNN:0;iRNA_PseU:0 1802 chr11 1857729 1857729 1 + G A COAD 1857729 - 1857709 1857749 41 AGACGGAGCTCACCCAGGGGCTCATGCCCCGAGAAGCGCTT AGACGGAGCTCACCCAGGGGTTCATGCCCCGAGAAGCGCTT Direct Gain 0 0.969462494323427 0 0.660536050796509 prediction 0.938924988646854 Functional Gain - SYT8 ENSG00000149043 CDS Human protein_coding chr11:1857729 chr11:1857729 synonymous SNV . 0 21 hPsi_associated_SNPs_102842 0 0 0 0 0 exosome 0 0.438718592995102 0.321072101593018 0 hPsi_site_1802 iPseU_CNN:0.321072101593018;iRNA_PseU:0 1803 chr19 49375725 49375725 1 + C T rs566352513 49375725 + 49375705 49375745 41 TGATCTTATGCAAGACGCTGCACGACCCCGCGCCCGCTTGT TGATCTTATGCAAGACGCTGTACGACCCCGCGCCCGCTTGT Direct Gain 0 0.969455362859949 0 0.747500598430634 prediction 0.938910725719899 Functional Gain - PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375725 chr19:49375725 . . 0 21 hPsi_associated_SNPs_102843 0 0 1 0 0 Cytosol 0 0.438765778335865 0.495001196861268 0 hPsi_site_1803 iPseU_CNN:0.495001196861268;iRNA_PseU:0 1804 chr22 23437798 23437798 1 + G A rs9624024 23437798 - 23437778 23437818 41 GGACACTGAGACCAGGCAGACAAGAGCCCAGCTGCCCTGGA GGACACTGAGACCAGGCAGATAAGAGCCCAGCTGCCCTGGA Direct Gain 0 0.969453371380643 0 0.978634774684906 prediction 0.938906742761285 Functional Gain - GNAZ ENSG00000128266 UTR5 Human protein_coding chr22:23437798 chr22:23437798 . . 0 21 hPsi_associated_SNPs_102844 0 0 0 0 0 Ribosome 0 0.438720024963414 0.957269549369812 0 hPsi_site_1804 iPseU_CNN:0.957269549369812;iRNA_PseU:0 1805 chr6 158093899 158093899 1 + C T SKCM 158093899 + 158093879 158093919 41 GGCACGCCCTGCGCCAGCCTCACACTGGGCCCGCCCACACC GGCACGCCCTGCGCCAGCCTTACACTGGGCCCGCCCACACC Direct Gain 0 0.969453211534981 0 0.999873161315918 prediction 0.938906423069962 Functional Gain - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:158093899 chr6:158093899 synonymous SNV . 0 21 hPsi_associated_SNPs_102845 0 0 0 0 1 chromatin 0 0.43871865173033 0.999746322631836 0 hPsi_site_1805 iPseU_CNN:0.999746322631836;iRNA_PseU:0 1806 chr5 31302360 31302360 1 + C T BLCA 31302360 + 31302340 31302380 41 GGGCTGGATATGTTTGATGTCATCACCGACCAGGAAACCCA GGGCTGGATATGTTTGATGTTATCACCGACCAGGAAACCCA Direct Gain 0 0.969439192901111 0 0.736732125282288 prediction 0.938878385802223 Functional Gain - CDH6 ENSG00000113361 CDS Human protein_coding chr5:31302360 chr5:31302360 synonymous SNV . 0 21 hPsi_associated_SNPs_102846 0 0 0 0 1 exosome 0 0.438718621234497 0.473464250564576 0 hPsi_site_1806 iPseU_CNN:0.473464250564576;iRNA_PseU:0 1807 chr11 67174327 67174327 1 + C T SKCM 67174327 + 67174307 67174347 41 CGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCT CGGCTGGACGCCGAGGTGTTTATGGCCCTGCTGCGGCGGCT Direct Gain 0 0.969437953076262 0 0.999156713485718 prediction 0.938875906152523 Functional Gain - TBC1D10C ENSG00000175463 CDS Human protein_coding chr11:67174327 chr11:67174327 synonymous SNV . 0 21 hPsi_associated_SNPs_102847 0 0 0 0 1 nucleus 0 0.438718590959937 0.998313426971436 0 hPsi_site_1807 iPseU_CNN:0.998313426971436;iRNA_PseU:0 1808 chr15 86236579 86236579 1 + G A BLCA 86236579 - 86236559 86236599 41 AAAGTGTGCCCGTTGACAGTCTTCTTATCTTTCTCCTTGTC AAAGTGTGCCCGTTGACAGTTTTCTTATCTTTCTCCTTGTC Direct Gain 0 0.96943118318922 0 0.999621629714966 prediction 0.938862366378441 Functional Gain - AKAP13 ENSG00000170776 CDS Human protein_coding chr15:86236579 chr15:86236579 synonymous SNV . 0 21 hPsi_associated_SNPs_102848 0 0 0 0 0 Ribosome 0 0.440598848013848 0.999243259429932 0 hPsi_site_1808 iPseU_CNN:0.999243259429932;iRNA_PseU:0 1809 chr21 18940989 18940989 1 + G T rs146043644 18940989 + 18940969 18941009 41 AAATTGCTGGGATTACAGGTGTGAGCCGCAGCATCCAGCCA AAATTGCTGGGATTACAGGTTTGAGCCGCAGCATCCAGCCA Direct Gain 0 0.96942383571748 0 0.992322206497192 prediction 0.938847671434959 Functional Gain - CXADR ENSG00000154639 UTR3 Human protein_coding chr21:18940989 chr21:18940989 . . 0 21 hPsi_associated_SNPs_102849 0 0 1 0 0 Ribosome 0 0.43864460505986 0.984644412994384 0 hPsi_site_1809 iPseU_CNN:0.984644412994384;iRNA_PseU:0 1810 chr9 140728902 140728902 1 + G A LIHC 140728902 - 140728882 140728922 41 AACCGCAGGTCCTGGTGGGCCATGAACACGCGCACGGGCAC AACCGCAGGTCCTGGTGGGCTATGAACACGCGCACGGGCAC Direct Gain 0 0.969422127976316 0 0.999868929386139 prediction 0.938844255952631 Functional Gain - EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140728902 chr9:140728902 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102850 0 0 0 0 0 chromatin 0 0.438704195008875 0.999737858772278 0 hPsi_site_1810 iPseU_CNN:0.999737858772278;iRNA_PseU:0 1811 chr12 124382441 124382441 1 + C A LUSC 124382441 - 124382421 124382461 41 TCAAGGTAGTTCTTGGGAGTGACATAGTTGCTGCGCCTCAA TCAAGGTAGTTCTTGGGAGTTACATAGTTGCTGCGCCTCAA Direct Gain 0 0.969391378037152 0 0.999975144863129 prediction 0.938782756074304 Functional Gain - DNAH10 ENSG00000197653 CDS Human protein_coding chr12:124382441 chr12:124382441 synonymous SNV . 0 21 hPsi_associated_SNPs_102851 0 0 0 0 0 cytosol 0 0.438715017273799 0.999950289726258 0 hPsi_site_1811 iPseU_CNN:0.999950289726258;iRNA_PseU:0 1812 chr10 5415922 5415922 1 + C T UCEC 5415922 + 5415902 5415942 41 GGAGGGCAAAGAGAAAAAGACTTTCCCCATCTCTGGGGCCA GGAGGGCAAAGAGAAAAAGATTTTCCCCATCTCTGGGGCCA Direct Gain 0 0.969348161410883 0 0.993080854415894 prediction 0.938696322821767 Functional Gain - UCN3 ENSG00000178473 CDS Human protein_coding chr10:5415922 chr10:5415922 nonsynonymous SNV 0.398 3 21 hPsi_associated_SNPs_102852 0 0 0 0 0 unknown 0 0.438718593200569 0.986161708831788 0 hPsi_site_1812 iPseU_CNN:0.986161708831788;iRNA_PseU:0 1813 chr17 80320444 80320444 1 + G A LUSC 80320444 - 80320424 80320464 41 GGGAAGACCCTGGGTCCAGTCAGCATCCTCAAGGCCCAGGC GGGAAGACCCTGGGTCCAGTTAGCATCCTCAAGGCCCAGGC Direct Gain 0 0.969340474329773 0 0.261210322380066 prediction 0.938680948659546 Functional Gain - TEX19 ENSG00000182459 CDS Human protein_coding chr17:80320444 chr17:80320444 nonsynonymous SNV 0.989 0 21 hPsi_associated_SNPs_102853 0 0 0 0 0 exosome 0 0.438737318267979 0 0 hPsi_site_1813 iPseU_CNN:0;iRNA_PseU:0 1814 chr20 57767049 57767049 1 + G A SKCM 57767049 - 57767029 57767069 41 GGGGCCTTGGCATCCCAGGGCTTCTCCGCTGCCGTCGCCTG GGGGCCTTGGCATCCCAGGGTTTCTCCGCTGCCGTCGCCTG Direct Gain 0 0.9693176308212 0 0.977572679519653 prediction 0.938635261642401 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767049 chr20:57767049 synonymous SNV . 0 21 hPsi_associated_SNPs_102854 0 0 0 0 0 exosome 0 0.438718592995102 0.955145359039306 0 hPsi_site_1814 iPseU_CNN:0.955145359039306;iRNA_PseU:0 1815 chr9 74860183 74860183 1 + G T LUAD 74860183 + 74860163 74860203 41 TTTATGGGGACTTTTTTGGTGATATTTCTGAGGTAAGTAAA TTTATGGGGACTTTTTTGGTTATATTTCTGAGGTAAGTAAA Direct Gain 0 0.969317237139443 0 0.954737901687622 prediction 0.938634474278887 Functional Gain - GDA ENSG00000119125 CDS Human protein_coding chr9:74860183 chr9:74860183 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102855 0 0 0 0 1 Cytosol 0 0.43871859286293 0.909475803375244 0 hPsi_site_1815 iPseU_CNN:0.909475803375244;iRNA_PseU:0 1816 chr1 159169599 159169599 1 + G A SKCM 159169599 - 159169579 159169619 41 AGCAGGAAGACAATGAAAGCCACGATCCCACCGATGATGGC AGCAGGAAGACAATGAAAGCTACGATCCCACCGATGATGGC Direct Gain 0 0.969299779001769 0 0.999999701976776 prediction 0.938599558003539 Functional Gain - CADM3 ENSG00000162706 CDS Human protein_coding chr1:159169599 chr1:159169599 synonymous SNV . 0 21 hPsi_associated_SNPs_102856 0 0 0 0 2 exosome 0 0.4372058278263 0.999999403953552 0 hPsi_site_1816 iPseU_CNN:0.999999403953552;iRNA_PseU:0 1817 chr21 42813770 42813770 1 + C A BLCA 42813770 - 42813750 42813790 41 GACAGGCTCAGCTGGTCCTGGATCTCCTGCTGGCCCCGGCA GACAGGCTCAGCTGGTCCTGTATCTCCTGCTGGCCCCGGCA Direct Gain 0 0.969290367893379 0 0.988058984279633 prediction 0.938580735786758 Functional Gain - MX1 ENSG00000157601 CDS Human protein_coding chr21:42813770 chr21:42813770 synonymous SNV . 0 21 hPsi_associated_SNPs_102857 0 0 0 0 0 exosome 0 0.438613536801943 0.976117968559266 0 hPsi_site_1817 iPseU_CNN:0.976117968559266;iRNA_PseU:0 1818 chr20 55028744 55028744 1 + G A rs6127755 55028744 - 55028724 55028764 41 ACTATGTTGCCCAGCCTGGTCTCAAACTCCTGCCTCAAGGG ACTATGTTGCCCAGCCTGGTTTCAAACTCCTGCCTCAAGGG Direct Gain 0 0.969285172899327 0 0.163553714752197 prediction 0.938570345798655 Functional Gain - CASS4 ENSG00000087589 intronic Human protein_coding chr20:55028744 chr20:55028744 . . 0 21 hPsi_associated_SNPs_102858 0 0 0 0 0 chromatin 0 0.438709495041348 0 0 hPsi_site_1818 iPseU_CNN:0;iRNA_PseU:0 1819 chr15 43821990 43821990 1 + C A STAD 43821990 - 43821970 43822010 41 CTTGGCTCGCCATTGGCAGGGTCATTCCCACTGACCACATA CTTGGCTCGCCATTGGCAGGTTCATTCCCACTGACCACATA Direct Gain 0 0.969233537165083 0 0.686660885810852 prediction 0.938467074330166 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43821990 chr15:43821990 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102859 0 0 0 0 0 nucleolus 0 0.439091850456046 0.373321771621704 0 hPsi_site_1819 iPseU_CNN:0.373321771621704;iRNA_PseU:0 1820 chr9 140157645 140157645 1 + G T BLCA 140157645 + 140157625 140157665 41 TGCACGACCTGGACGTGGGTGAAATCTGCACCGTGGACCCG TGCACGACCTGGACGTGGGTTAAATCTGCACCGTGGACCCG Direct Gain 0 0.969232195380899 0 0.999978303909302 prediction 0.938464390761797 Functional Gain - NELFB ENSG00000188986 CDS Human protein_coding chr9:140157645 chr9:140157645 stopgain 0.903 1 21 hPsi_associated_SNPs_102860 0 0 1 0 1 Ribosome 0 0.438712200103905 0.999956607818604 0 hPsi_site_1820 iPseU_CNN:0.999956607818604;iRNA_PseU:0 1821 chr10 38344077 38344077 1 + C T LUAD 38344077 + 38344057 38344097 41 GAAAGCTTTCTGGGAGAAGTCACATCTCACTCGACATCAGA GAAAGCTTTCTGGGAGAAGTTACATCTCACTCGACATCAGA Direct Gain 0 0.969225698164489 0 0.998487651348114 prediction 0.938451396328977 Functional Gain - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38344077 chr10:38344077 nonsynonymous SNV 0.942 2 21 hPsi_associated_SNPs_102861 0 0 1 0 0 Cytosol 0 0.438719450165118 0.996975302696228 0 hPsi_site_1821 iPseU_CNN:0.996975302696228;iRNA_PseU:0 1822 chr18 60645848 60645848 1 + C T UCEC 60645848 + 60645828 60645868 41 GTGCCACCACCCAGTCCTGGCATCTTTCCTCCCTCAGTGAA GTGCCACCACCCAGTCCTGGTATCTTTCCTCCCTCAGTGAA Direct Gain 0 0.969209631981494 0 0.999913692474365 prediction 0.938419263962987 Functional Gain - PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60645848 chr18:60645848 synonymous SNV . 0 21 hPsi_associated_SNPs_102862 0 0 0 0 0 Cytosol 0 0.438718592888013 0.99982738494873 0 hPsi_site_1822 iPseU_CNN:0.99982738494873;iRNA_PseU:0 1823 chr18 21441703 21441703 1 + C A LIHC 21441703 - 21441683 21441723 41 GGTTGCGGGCAGCTCCTGGAGATCCGCCACCATACTGTTGC GGTTGCGGGCAGCTCCTGGATATCCGCCACCATACTGTTGC Direct Gain 0 0.969205427492661 0 0.999779641628265 prediction 0.938410854985322 Functional Gain - LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21441703 chr18:21441703 nonsynonymous SNV 0.926 0 21 hPsi_associated_SNPs_102863 0 0 0 0 0 Cytosol 0 0.438718723077705 0.99955928325653 0 hPsi_site_1823 iPseU_CNN:0.99955928325653;iRNA_PseU:0 1824 chrX 102192696 102192696 1 + G A BLCA 102192696 - 102192676 102192716 41 GGGCTGACCTCAAAGAAGGTCACGCCCAGGCGCTCGGCGTA GGGCTGACCTCAAAGAAGGTTACGCCCAGGCGCTCGGCGTA Direct Gain 0 0.969205274340201 0 0.999423444271088 prediction 0.938410548680402 Functional Gain - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192696 chrX:102192696 synonymous SNV . 0 21 hPsi_associated_SNPs_102864 0 0 0 0 0 exosome 0 0.438724306670943 0.998846888542176 0 hPsi_site_1824 iPseU_CNN:0.998846888542176;iRNA_PseU:0 1825 chr2 182400905 182400905 1 + T A rs1449258 182400905 - 182400885 182400925 41 AAAAATAATTATCCAGAAGTAATTTCACTAAGCTCAAACCA AAAAATAATTATCCAGAAGTTATTTCACTAAGCTCAAACCA Direct Gain 0 0.969179876808549 0 0.893257737159729 prediction 0.938359753617097 Functional Gain - ITGA4 ENSG00000115232 UTR3 Human protein_coding chr2:182400905 chr2:182400905 . . 0 21 hPsi_associated_SNPs_102865 0 0 0 0 0 exosome 0 0.435571759694253 0.786515474319458 0 hPsi_site_1825 iPseU_CNN:0.786515474319458;iRNA_PseU:0 1826 chr12 125834396 125834396 1 + G A SKCM 125834396 - 125834376 125834416 41 GGGTAGATCTTCCGTAAGGTCACTGTCATCCCAGCCCATGC GGGTAGATCTTCCGTAAGGTTACTGTCATCCCAGCCCATGC Direct Gain 0 0.969141972811041 0 0.999846577644348 prediction 0.938283945622082 Functional Gain - TMEM132B ENSG00000139364 CDS Human protein_coding chr12:125834396 chr12:125834396 nonsynonymous SNV 0.327 0 21 hPsi_associated_SNPs_102866 0 0 0 0 0 exosome 0 0.438718575365885 0.999693155288696 0 hPsi_site_1826 iPseU_CNN:0.999693155288696;iRNA_PseU:0 1827 chr12 56481659 56481659 1 + G A STAD 56481659 - 56481639 56481679 41 AGGGCCTGAGCAGCCCCCGGCACACTCATCATGGCAGCACT AGGGCCTGAGCAGCCCCCGGTACACTCATCATGGCAGCACT Direct Gain 0 0.969141309055203 0 0.997651338577271 prediction 0.938282618110406 Functional Gain - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56481659 chr12:56481659 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_102867 0 0 0 0 0 Cytosol 0 0.438685386077033 0.995302677154542 0 hPsi_site_1827 iPseU_CNN:0.995302677154542;iRNA_PseU:0 1828 chr4 169842795 169842795 1 + C T LUSC 169842795 + 169842775 169842815 41 AACGGGGTGCACTCTCTGATCATAGAGCCAGTCACGTCACG AACGGGGTGCACTCTCTGATTATAGAGCCAGTCACGTCACG Direct Gain 0 0.969118386798148 0 0.965692520141602 prediction 0.938236773596297 Functional Gain - PALLD ENSG00000129116 CDS Human protein_coding chr4:169842795 chr4:169842795 synonymous SNV . 0 21 hPsi_associated_SNPs_102868 0 0 1 0 1 Cytosol 0 0.438230557646485 0.931385040283204 0 hPsi_site_1828 iPseU_CNN:0.931385040283204;iRNA_PseU:0 1829 chr12 53453456 53453456 1 + C T rs34044566 53453456 + 53453436 53453476 41 CCAGGCTACCGGGAGGTGGTCATCCTGGAGGACCCTGGGCT CCAGGCTACCGGGAGGTGGTTATCCTGGAGGACCCTGGGCT Direct Gain 0 0.969116443160069 0 0.999971866607666 prediction 0.938232886320138 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453456 chr12:53453456 synonymous SNV . 0 21 hPsi_associated_SNPs_102869 0 0 1 0 0 cytosol 0 0.438718564167374 0.999943733215332 0 hPsi_site_1829 iPseU_CNN:0.999943733215332;iRNA_PseU:0 1830 chr6 31918418 31918418 1 + G T UCEC 31918418 + 31918398 31918438 41 GGGGAGAAGCGGGACCTGGAGATAGAAGTAGTCCTATTTCA GGGGAGAAGCGGGACCTGGATATAGAAGTAGTCCTATTTCA Direct Gain 0 0.969101693392811 0 0.998140811920166 prediction 0.938203386785622 Functional Gain - CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31918418 chr6:31918418 nonsynonymous SNV 0.057 1 21 hPsi_associated_SNPs_102870 0 0 1 0 1 chromatin 0 0.438718589229179 0.996281623840332 0 hPsi_site_1830 iPseU_CNN:0.996281623840332;iRNA_PseU:0 1831 chr16 19548070 19548070 1 + C T SKCM 19548070 + 19548050 19548090 41 TATCAAAAGTCTTACAGGTTCATATGCCAAATTACCTAGTC TATCAAAAGTCTTACAGGTTTATATGCCAAATTACCTAGTC Direct Gain 0 0.969097417496426 0 0.981364846229553 prediction 0.938194834992853 Functional Gain - CCP110 ENSG00000103540 CDS Human protein_coding chr16:19548070 chr16:19548070 nonsynonymous SNV 0.975 2 21 hPsi_associated_SNPs_102871 0 0 1 0 0 Cytosol 0 0.43871819050154 0.962729692459106 0 hPsi_site_1831 iPseU_CNN:0.962729692459106;iRNA_PseU:0 1832 chr9 133943476 133943476 1 + C A UCEC 133943476 - 133943456 133943496 41 ACTGACCGAGCCCTGTGGGTGACAGCTGCAAGCTGGGGGCA ACTGACCGAGCCCTGTGGGTTACAGCTGCAAGCTGGGGGCA Direct Gain 0 0.969084277007686 0 0.998280882835388 prediction 0.938168554015373 Functional Gain - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133943476 chr9:133943476 nonsynonymous SNV 0.293 0 21 hPsi_associated_SNPs_102872 0 0 0 0 0 chromatin 0 0.438716265333512 0.996561765670776 0 hPsi_site_1832 iPseU_CNN:0.996561765670776;iRNA_PseU:0 1833 chr20 25203612 25203612 1 + T A rs140279087 25203612 - 25203592 25203632 41 CCATCCGGGCCCCCTTACCTATGAGGCCCACACCAGCTGCA CCATCCGGGCCCCCTTACCTTTGAGGCCCACACCAGCTGCA Direct Gain 0 0.96907900656216 0 0.00119012594223022 prediction 0.93815801312432 Functional Gain - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25203612 chr20:25203612 nonsynonymous SNV 0.933 4 21 hPsi_associated_SNPs_102873 0 0 0 0 0 Endoplasmic reticulum 0 0.438794151081861 0 0 hPsi_site_1833 iPseU_CNN:0;iRNA_PseU:0 1834 chr1 150530548 150530548 1 + C A rs56228576 150530548 - 150530528 150530568 41 GGTGATGTTGGGCCGGGGGAGATGTCCACAGCGCTCCGGGG GGTGATGTTGGGCCGGGGGATATGTCCACAGCGCTCCGGGG Direct Gain 0 0.969051565585006 0 0.999229609966278 prediction 0.938103131170013 Functional Gain - ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150530548 chr1:150530548 nonsynonymous SNV 0.958 3 21 hPsi_associated_SNPs_102874 0 0 0 0 0 Endoplasmic reticulum 0 0.43871675399577 0.998459219932556 0 hPsi_site_1834 iPseU_CNN:0.998459219932556;iRNA_PseU:0 1835 chr13 32811922 32811922 1 + C T LUAD 32811922 + 32811902 32811942 41 TGTTGAGCAGACTACTGGCACATATGCCACTCGATAAGGCT TGTTGAGCAGACTACTGGCATATATGCCACTCGATAAGGCT Direct Gain 0 0.969046254767203 0 0.986672043800354 prediction 0.938092509534405 Functional Gain - FRY ENSG00000073910 CDS Human protein_coding chr13:32811922 chr13:32811922 nonsynonymous SNV 0.887 1 21 hPsi_associated_SNPs_102875 0 0 1 0 0 cytosol 0 0.438718559807264 0.973344087600708 0 hPsi_site_1835 iPseU_CNN:0.973344087600708;iRNA_PseU:0 1836 chr6 26377947 26377947 1 + G A rs374436079 26377947 - 26377927 26377967 41 GGAAGGGAACCTCAGGGCTACATGTGGGCTCTTCCCATGCA GGAAGGGAACCTCAGGGCTATATGTGGGCTCTTCCCATGCA Direct Gain 0 0.969043403513115 0 0.997244000434875 prediction 0.93808680702623 Functional Gain - BTN3A2 ENSG00000186470 UTR3 Human protein_coding chr6:26377947 chr6:26377947 . . 0 21 hPsi_associated_SNPs_102876 0 0 0 0 0 Ribosome 0 0.438718593122309 0.99448800086975 0 hPsi_site_1836 iPseU_CNN:0.99448800086975;iRNA_PseU:0 1837 chr6 43472736 43472736 1 + G A COAD 43472736 - 43472716 43472756 41 GGCCGGGGGACTGGCTGGATCACCTGGGACACCCTCACTCA GGCCGGGGGACTGGCTGGATTACCTGGGACACCCTCACTCA Direct Gain 0 0.969038663872294 0 0.999996185302734 prediction 0.938077327744589 Functional Gain - TJAP1 ENSG00000137221 CDS Human protein_coding chr6:43472736 chr6:43472736 nonsynonymous SNV 0.060 0 21 hPsi_associated_SNPs_102877 0 0 0 0 0 chromatin 0 0.438718614612194 0.999992370605468 0 hPsi_site_1837 iPseU_CNN:0.999992370605468;iRNA_PseU:0 1838 chr1 237948198 237948198 1 + C T SKCM 237948198 + 237948178 237948218 41 GACAGTACAAACTGATTCCTCATAATCCAAATGCTGGGCTC GACAGTACAAACTGATTCCTTATAATCCAAATGCTGGGCTC Direct Gain 0 0.969038121686845 0 0.0089493989944458 prediction 0.938076243373689 Functional Gain - RYR2 ENSG00000198626 CDS Human protein_coding chr1:237948198 chr1:237948198 nonsynonymous SNV 0.983 4 21 hPsi_associated_SNPs_102878 0 0 1 0 1 nucleolus 0 0.438461069527201 0 0 hPsi_site_1838 iPseU_CNN:0;iRNA_PseU:0 1839 chr14 71444498 71444498 1 + C T UCEC 71444498 + 71444478 71444518 41 AGATGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTGAA AGATGCACAACCAGAGAGGTTTCAGCACCTCTGCATCTGAA Direct Gain 0 0.969016702461762 0 0.823278069496155 prediction 0.938033404923523 Functional Gain - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444498 chr14:71444498 nonsynonymous SNV 0.156 0 21 hPsi_associated_SNPs_102879 0 0 1 0 0 Endoplasmic reticulum 0 0.438717309899968 0.64655613899231 0 hPsi_site_1839 iPseU_CNN:0.64655613899231;iRNA_PseU:0 1840 chr8 11415514 11415514 1 + G T LUAD 11415514 + 11415494 11415534 41 ACAGATGAAGGGAGCAGATTGTCACTCCCAAGGCTGATTGA ACAGATGAAGGGAGCAGATTTTCACTCCCAAGGCTGATTGA Direct Gain 0 0.9690154628722 0 0.90922486782074 prediction 0.938030925744401 Functional Gain - BLK ENSG00000136573 CDS Human protein_coding chr8:11415514 chr8:11415514 nonsynonymous SNV 0.835 1 21 hPsi_associated_SNPs_102880 0 0 0 0 2 exosome 0 0.438718593087158 0.81844973564148 0 hPsi_site_1840 iPseU_CNN:0.81844973564148;iRNA_PseU:0 1841 chr10 73406448 73406448 1 + G A rs115450602 73406448 - 73406428 73406468 41 GATTGCTGAGGTCCCTTGGACAAAATCCCTCTGGGTGCCTC GATTGCTGAGGTCCCTTGGATAAAATCCCTCTGGGTGCCTC Direct Gain 0 0.969004455069695 0 0.999999523162842 prediction 0.93800891013939 Functional Gain - CDH23 ENSG00000107736 CDS Human protein_coding chr10:73406448 chr10:73406448 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_102881 0 0 0 0 0 exosome 0 0.438686009842194 0.999999046325684 0 hPsi_site_1841 iPseU_CNN:0.999999046325684;iRNA_PseU:0 1842 chr11 35227670 35227670 1 + C T LUSC 35227670 + 35227650 35227690 41 TGGTCACAGCAGCCTCAGCTCATACCAGCCATCCAATGCAA TGGTCACAGCAGCCTCAGCTTATACCAGCCATCCAATGCAA Direct Gain 0 0.969000085559077 0 0.872693479061127 prediction 0.938000171118154 Functional Gain - CD44 ENSG00000026508 CDS Human protein_coding chr11:35227670 chr11:35227670 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_102882 0 0 0 0 1 Nucleus 0 0.439826460395697 0.745386958122254 0 hPsi_site_1842 iPseU_CNN:0.745386958122254;iRNA_PseU:0 1843 chr12 130841526 130841526 1 + G T LUAD 130841526 + 130841506 130841546 41 GAGGTGCACCATTAATTAGTGTTAAGCCACTAGATAACTGG GAGGTGCACCATTAATTAGTTTTAAGCCACTAGATAACTGG Direct Gain 0 0.968996728703216 0 0.468353897333145 prediction 0.937993457406431 Functional Gain - PIWIL1 ENSG00000125207 CDS Human protein_coding chr12:130841526 chr12:130841526 nonsynonymous SNV 0.085 1 21 hPsi_associated_SNPs_102883 0 0 0 0 1 Nucleus 0 0.43871859249337 0 0 hPsi_site_1843 iPseU_CNN:0;iRNA_PseU:0 1844 chr20 19665972 19665972 1 + G A LUSC 19665972 - 19665952 19665992 41 TGGTGTGTACGGTCCTTCATCATCATCCTCGTCCTCCTCTT TGGTGTGTACGGTCCTTCATTATCATCCTCGTCCTCCTCTT Direct Gain 0 0.968995260962548 0 0.970415234565735 prediction 0.937990521925096 Functional Gain - SLC24A3 ENSG00000185052 CDS Human protein_coding chr20:19665972 chr20:19665972 nonsynonymous SNV 0.582 0 21 hPsi_associated_SNPs_102884 0 0 0 0 0 exosome 0 0.438721828373341 0.94083046913147 0 hPsi_site_1844 iPseU_CNN:0.94083046913147;iRNA_PseU:0 1845 chr2 85822940 85822940 1 + G A UCEC 85822940 - 85822920 85822960 41 AGCAGCATGTTGGTTCGCGTCTCCTGCTCAGGGTCCGACGG AGCAGCATGTTGGTTCGCGTTTCCTGCTCAGGGTCCGACGG Direct Gain 0 0.968986419705894 0 0.99959409236908 prediction 0.937972839411789 Functional Gain - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85822940 chr2:85822940 synonymous SNV . 0 21 hPsi_associated_SNPs_102885 0 0 0 0 0 Ribosome 0 0.436579104422755 0.99918818473816 0 hPsi_site_1845 iPseU_CNN:0.99918818473816;iRNA_PseU:0 1846 chr1 29647301 29647301 1 + C T COAD 29647301 + 29647281 29647321 41 TACGGGTGCACCTCCATCGTCATGCTCAACCAGCTGAACCA TACGGGTGCACCTCCATCGTTATGCTCAACCAGCTGAACCA Direct Gain 0 0.968983231748627 0 1 prediction 0.937966463497255 Functional Gain - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29647301 chr1:29647301 synonymous SNV . 0 21 hPsi_associated_SNPs_102886 0 0 1 0 1 Endoplasmic reticulum 0 0.438719855568875 1 0 hPsi_site_1846 iPseU_CNN:1;iRNA_PseU:0 1847 chr4 664310 664310 1 + C T rs111404897 664310 + 664290 664330 41 TGAAGTGCTGGGATTACAGGCATGAGCCACCACGCCCAGCC TGAAGTGCTGGGATTACAGGTATGAGCCACCACGCCCAGCC Direct Gain 0 0.968970115583818 0 0.999539017677307 prediction 0.937940231167636 Functional Gain - PDE6B ENSG00000133256 UTR3 Human protein_coding chr4:664310 chr4:664310 . . 0 21 hPsi_associated_SNPs_102887 2 0 0 0 0 Nucleus 0 0.438665489082836 0.999078035354614 0 hPsi_site_1847 iPseU_CNN:0.999078035354614;iRNA_PseU:0 1848 chr17 40940387 40940387 1 + C A PAAD 40940387 - 40940367 40940407 41 GGATCGGGGTCTGCGCCGGAGATTCCTCCCTGGGGGTCTCC GGATCGGGGTCTGCGCCGGATATTCCTCCCTGGGGGTCTCC Direct Gain 0 0.968945964062993 0 0.999994158744812 prediction 0.937891928125986 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40940387 chr17:40940387 nonsynonymous SNV 0.589 0 21 hPsi_associated_SNPs_102888 0 0 0 0 0 chromatin 0 0.438775230327025 0.999988317489624 0 hPsi_site_1848 iPseU_CNN:0.999988317489624;iRNA_PseU:0 1849 chr11 67059201 67059201 1 + C T SARC 67059201 + 67059181 67059221 41 CAGCGGGGCCGGAGGAGCTTCATCTTCAAGGGCCAGGGTGA CAGCGGGGCCGGAGGAGCTTTATCTTCAAGGGCCAGGGTGA Direct Gain 0 0.968929897130935 0 0.984219431877136 prediction 0.93785979426187 Functional Gain - ANKRD13D ENSG00000172932 CDS Human protein_coding chr11:67059201 chr11:67059201 synonymous SNV . 0 21 hPsi_associated_SNPs_102889 0 0 1 0 0 Cytosol 0 0.438718091902085 0.968438863754272 0 hPsi_site_1849 iPseU_CNN:0.968438863754272;iRNA_PseU:0 1850 chr1 186862209 186862209 1 + G A SKCM 186862209 - 186862189 186862229 41 TTATGTCATTATTGAAATGTCTTGTTCTCTTCCTGCTGTCA TTATGTCATTATTGAAATGTTTTGTTCTCTTCCTGCTGTCA Direct Gain 0 0.968923192416314 0 0.999172151088715 prediction 0.937846384832627 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186862209 chr1:186862209 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102890 0 0 0 0 0 Nucleus 0 0.438284922656373 0.99834430217743 0 hPsi_site_1850 iPseU_CNN:0.99834430217743;iRNA_PseU:0 1851 chr22 41525989 41525989 1 + G T SARC 41525989 + 41525969 41526009 41 TCCCCCTCAAAAATGCTGGTGATAAGAGAAATCAACAGCGT TCCCCCTCAAAAATGCTGGTTATAAGAGAAATCAACAGCGT Direct Gain 0 0.968919775480473 0 0.999147057533264 prediction 0.937839550960946 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41525989 chr22:41525989 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_102891 0 0 1 0 1 Cytosol 0 0.436529765271921 0.998294115066528 0 hPsi_site_1851 iPseU_CNN:0.998294115066528;iRNA_PseU:0 1852 chr12 20799759 20799759 1 + T A STAD 20799759 - 20799739 20799779 41 ATTCCCAGACAGACATCCGTATTTATCATCTGTCACATTAT ATTCCCAGACAGACATCCGTTTTTATCATCTGTCACATTAT Direct Gain 0 0.968911613351482 0 0.0969944596290588 prediction 0.937823226702965 Functional Gain - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20799759 chr12:20799759 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_102892 0 0 0 0 0 Nucleus 0 0.438718590335434 0 0 hPsi_site_1852 iPseU_CNN:0;iRNA_PseU:0 1853 chr1 160160734 160160734 1 + G A BLCA 160160734 - 160160714 160160754 41 GTAGAGGAGTGCCAGCACCTCATACTTCTTGAACACATTCT GTAGAGGAGTGCCAGCACCTTATACTTCTTGAACACATTCT Direct Gain 0 0.968897674451991 0 0.999276041984558 prediction 0.937795348903982 Functional Gain - CASQ1 ENSG00000143318 CDS Human protein_coding chr1:160160734 chr1:160160734 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102893 0 0 0 0 0 exosome 0 0.436052154965825 0.998552083969116 0 hPsi_site_1853 iPseU_CNN:0.998552083969116;iRNA_PseU:0 1854 chr4 95129593 95129593 1 + G A LUSC 95129593 - 95129573 95129613 41 GCTTCGGGCGCTTCCTCAATCTTATTCCTTTTCTCAAAGCG GCTTCGGGCGCTTCCTCAATTTTATTCCTTTTCTCAAAGCG Direct Gain 0 0.968897035651604 0 0.99948662519455 prediction 0.937794071303208 Functional Gain - SMARCAD1 ENSG00000163104 CDS Human protein_coding chr4:95129593 chr4:95129593 synonymous SNV . 0 21 hPsi_associated_SNPs_102894 0 0 0 0 0 Nucleus 0 0.438611656879552 0.9989732503891 0 hPsi_site_1854 iPseU_CNN:0.9989732503891;iRNA_PseU:0 1855 chr16 19126994 19126994 1 + C T BLCA 19126994 + 19126974 19127014 41 GTGGGGACGCATCCTATCCTCATATGTGCTCAAGACAGTGC GTGGGGACGCATCCTATCCTTATATGTGCTCAAGACAGTGC Direct Gain 0 0.968876367753182 0 0.594953417778015 prediction 0.937752735506365 Functional Gain - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19126994 chr16:19126994 nonsynonymous SNV 0.947 3 21 hPsi_associated_SNPs_102895 0 0 1 0 0 Ribosome 0 0.438891093196858 0.18990683555603 0 hPsi_site_1855 iPseU_CNN:0.18990683555603;iRNA_PseU:0 1856 chr4 57783956 57783956 1 + G A rs552596569 57783956 - 57783936 57783976 41 CAAAGTGCTGGGATTACAGGCATGAGCCGCCACACCCGGCA CAAAGTGCTGGGATTACAGGTATGAGCCGCCACACCCGGCA Direct Gain 0 0.968845534335718 0 0.998801708221436 prediction 0.937691068671435 Functional Gain - REST ENSG00000084093 intronic Human protein_coding chr4:57783956 chr4:57783956 . . 0 21 hPsi_associated_SNPs_102896 0 0 0 0 0 Ribosome 0 0.438718592636355 0.997603416442872 0 hPsi_site_1856 iPseU_CNN:0.997603416442872;iRNA_PseU:0 1857 chr17 40127447 40127447 1 + C T UCEC 40127447 + 40127427 40127467 41 GATGTGGAGCACAAAAGCCTCTCATCCCCCATTAACCAGGG GATGTGGAGCACAAAAGCCTTTCATCCCCCATTAACCAGGG Direct Gain 0 0.968844316824834 0 0.954923808574677 prediction 0.937688633649669 Functional Gain - CNP ENSG00000173786 UTR3 Human protein_coding chr17:40127447 chr17:40127447 . . 0 21 hPsi_associated_SNPs_102897 0 0 0 0 0 Ribosome 0 0.438701346427261 0.909847617149354 0 hPsi_site_1857 iPseU_CNN:0.909847617149354;iRNA_PseU:0 1858 chr5 140562302 140562302 1 + G T LUAD 140562302 + 140562282 140562322 41 AAAGACCTGGGGTTGGGGTTGACAGAGATGTCCACCCGCAA AAAGACCTGGGGTTGGGGTTTACAGAGATGTCCACCCGCAA Direct Gain 0 0.968841223498583 0 0.301806896924973 prediction 0.937682446997166 Functional Gain - PCDHB16 ENSG00000196963 CDS Human other chr5:140562302 chr5:140562302 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_102898 0 0 0 0 0 Nucleus 0 0.438718592994814 0 0 hPsi_site_1858 iPseU_CNN:0;iRNA_PseU:0 1859 chr8 27288464 27288464 1 + C T SKCM 27288464 + 27288444 27288484 41 CTCAGGGAGGAGGAGTGCGTCATGAAGTTCTTCAACACTCT CTCAGGGAGGAGGAGTGCGTTATGAAGTTCTTCAACACTCT Direct Gain 0 0.968822979011804 0 0.999990463256836 prediction 0.937645958023608 Functional Gain - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288464 chr8:27288464 synonymous SNV . 0 21 hPsi_associated_SNPs_102899 0 0 1 0 1 chromatin 0 0.438718727385895 0.999980926513672 0 hPsi_site_1859 iPseU_CNN:0.999980926513672;iRNA_PseU:0 1860 chr1 22835660 22835660 1 + C A BRCA 22835660 - 22835640 22835680 41 TTGTACTCAATCTTCTGTTGGATGGCCTCCAAGATCAACTG TTGTACTCAATCTTCTGTTGTATGGCCTCCAAGATCAACTG Direct Gain 0 0.96881780937077 0 0.92483252286911 prediction 0.937635618741541 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835660 chr1:22835660 synonymous SNV . 0 21 hPsi_associated_SNPs_102900 0 0 0 0 0 Nucleus 0 0.441766697414379 0.84966504573822 0 hPsi_site_1860 iPseU_CNN:0.84966504573822;iRNA_PseU:0 1861 chr5 140208940 140208940 1 + G A SKCM 140208940 - 140208920 140208960 41 CCGCGCGGTTACCACCAACTCATAGGCCGACACGCTCTCGC CCGCGCGGTTACCACCAACTTATAGGCCGACACGCTCTCGC Direct Gain 0 0.968816913613253 0 0.998383641242981 prediction 0.937633827226506 Functional Gain - PCDHA6 ENSG00000081842 CDS Human protein_coding chr5:140208940 chr5:140208940 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_102901 0 0 0 0 0 nucleus 0 0.438718587176982 0.996767282485962 0 hPsi_site_1861 iPseU_CNN:0.996767282485962;iRNA_PseU:0 1862 chr14 101450246 101450246 1 + C T SKCM 101450246 + 101450226 101450266 41 ACTACTGGTGGCGTATGAGTCATAGACAATGAATACGTGTC ACTACTGGTGGCGTATGAGTTATAGACAATGAATACGTGTC Direct Gain 0 0.968812996457444 0 0.940138280391693 prediction 0.937625992914889 Functional Gain - SNORD114-23 ENSG00000200406 ncRNA_exonic Human snoRNA chr14:101450246 chr14:101450246 . . 0 21 hPsi_associated_SNPs_102902 0 0 0 0 0 unknown 0 0.438638150298059 0.880276560783386 0 hPsi_site_1862 iPseU_CNN:0.880276560783386;iRNA_PseU:0 1863 chr3 183824066 183824066 1 + G A CESC 183824066 - 183824046 183824086 41 GGGGCGCAGTGGGACAGCATCTCCCCGGGCTGTTGCAGTGG GGGGCGCAGTGGGACAGCATTTCCCCGGGCTGTTGCAGTGG Direct Gain 0 0.968797737213851 0 0.998092532157898 prediction 0.937595474427703 Functional Gain - HTR3E ENSG00000186038 CDS Human protein_coding chr3:183824066 chr3:183824066 nonsynonymous SNV 0.530 1 21 hPsi_associated_SNPs_102903 0 0 0 0 0 unknown 0 0.438259090732819 0.996185064315796 0 hPsi_site_1863 iPseU_CNN:0.996185064315796;iRNA_PseU:0 1864 chr1 12416026 12416026 1 + G T ESCA 12416026 + 12416006 12416046 41 GGAACCCAAAACTATATGGTGAGAATGCGACTCTATGACGT GGAACCCAAAACTATATGGTTAGAATGCGACTCTATGACGT Direct Gain 0 0.968790584111282 0 0.783614277839661 prediction 0.937581168222564 Functional Gain - VPS13D ENSG00000048707 CDS Human protein_coding chr1:12416026 chr1:12416026 synonymous SNV . 0 21 hPsi_associated_SNPs_102904 0 0 1 0 1 Nucleus 0 0.438754851936864 0.567228555679322 0 hPsi_site_1864 iPseU_CNN:0.567228555679322;iRNA_PseU:0 1865 chr1 169356302 169356302 1 + C T LUAD 169356302 + 169356282 169356322 41 TAATCCATTTTTTGAGTCTTCACCAACCACCTTACTTGCTA TAATCCATTTTTTGAGTCTTTACCAACCACCTTACTTGCTA Direct Gain 0 0.968788433755442 0 0.99936044216156 prediction 0.937576867510884 Functional Gain - BLZF1 ENSG00000117475 CDS Human protein_coding chr1:169356302 chr1:169356302 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_102905 0 0 1 7 1 Ribosome 0 0.438726535714715 0.99872088432312 0 hPsi_site_1865 iPseU_CNN:0.99872088432312;iRNA_PseU:0 1866 chr19 57868770 57868770 1 + C T READ 57868770 + 57868750 57868790 41 TGTGGTGAATGTGGTAAATTCTTCAGCCATAGCTCCAACCT TGTGGTGAATGTGGTAAATTTTTCAGCCATAGCTCCAACCT Direct Gain 0 0.96878410736922 0 0.951548337936401 prediction 0.93756821473844 Functional Gain - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57868770 chr19:57868770 synonymous SNV . 0 21 hPsi_associated_SNPs_102906 0 0 0 0 0 chromatin 0 0.438935736293298 0.903096675872802 0 hPsi_site_1866 iPseU_CNN:0.903096675872802;iRNA_PseU:0 1867 chr1 159410288 159410288 1 + C T SKCM 159410288 + 159410268 159410308 41 AGTTGAGGGCCGGAAGAAGGCTTTTGCCACCTGTGCATCCC AGTTGAGGGCCGGAAGAAGGTTTTTGCCACCTGTGCATCCC Direct Gain 0 0.968778385800608 0 0.999534010887146 prediction 0.937556771601215 Functional Gain - OR10J1 ENSG00000196184 CDS Human protein_coding chr1:159410288 chr1:159410288 nonsynonymous SNV 0.027 2 21 hPsi_associated_SNPs_102907 0 0 0 0 0 unknown 0 0.438718187885815 0.999068021774292 0 hPsi_site_1867 iPseU_CNN:0.999068021774292;iRNA_PseU:0 1868 chr11 56143843 56143843 1 + C A LUAD 56143843 - 56143823 56143863 41 AGGGTCCCATAGAATATGGTGACTGCCAGCATGTGAGAGCC AGGGTCCCATAGAATATGGTTACTGCCAGCATGTGAGAGCC Direct Gain 0 0.968761000727541 0 0.886204957962036 prediction 0.937522001455083 Functional Gain - OR8U1;OR8U8 ENSG00000172199 CDS Human protein_coding chr11:56143843 chr11:56143843 synonymous SNV . 0 21 hPsi_associated_SNPs_102908 0 0 0 0 0 unknown 0 0.438736143951942 0.772409915924072 0 hPsi_site_1868 iPseU_CNN:0.772409915924072;iRNA_PseU:0 1869 chr11 77924730 77924730 1 + C A HNSC 77924730 - 77924710 77924750 41 GGAGATGTGGGGAGTGCAGAGATGTAGGCCGCCCTGCTCCG GGAGATGTGGGGAGTGCAGATATGTAGGCCGCCCTGCTCCG Direct Gain 0 0.96874452958516 0 0.983807563781738 prediction 0.937489059170319 Functional Gain - USP35 ENSG00000118369 CDS Human protein_coding chr11:77924730 chr11:77924730 synonymous SNV . 0 21 hPsi_associated_SNPs_102909 0 0 0 0 0 nucleolus 0 0.438670057813131 0.967615127563476 0 hPsi_site_1869 iPseU_CNN:0.967615127563476;iRNA_PseU:0 1870 chr12 32490849 32490849 1 + G A rs7309590 32490849 - 32490829 32490869 41 AGCTCCCATTTTTTCTTTTGCTTCCCCTCCTCCATCCTCCA AGCTCCCATTTTTTCTTTTGTTTCCCCTCCTCCATCCTCCA Direct Gain 0 0.968733627361088 0 0.573255479335785 prediction 0.937467254722175 Functional Gain - BICD1 ENSG00000151746 intronic Human protein_coding chr12:32490849 chr12:32490849 . . 0 21 hPsi_associated_SNPs_102910 0 0 0 0 0 Nucleus 0 0.438718592971869 0.14651095867157 0 hPsi_site_1870 iPseU_CNN:0.14651095867157;iRNA_PseU:0 1871 chr11 56431989 56431989 1 + G T ESCA 56431989 + 56431969 56432009 41 CAAGACAAGTGGGCCTCTGTGTTCTACACGGTTATCATCCC CAAGACAAGTGGGCCTCTGTTTTCTACACGGTTATCATCCC Direct Gain 0 0.968717795167367 0 0.999987959861755 prediction 0.937435590334734 Functional Gain - OR5AR1 ENSG00000172459 CDS Human polymorphic_pseudogene chr11:56431989 chr11:56431989 synonymous SNV . 0 21 hPsi_associated_SNPs_102911 0 0 0 0 0 unknown 0 0.438811911657545 0.99997591972351 0 hPsi_site_1871 iPseU_CNN:0.99997591972351;iRNA_PseU:0 1872 chr10 102743434 102743434 1 + G A UCEC 102743434 - 102743414 102743454 41 GGGAGGAGGCCAGGATGAGGCAGAGGCCACCAAGCGCGGCA GGGAGGAGGCCAGGATGAGGTAGAGGCCACCAAGCGCGGCA Direct Gain 0 0.968717128225324 0 0.90765905380249 prediction 0.937434256450647 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102743434 chr10:102743434 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102912 0 0 0 0 0 nucleoplasm 0 0.438297793596356 0.81531810760498 0 hPsi_site_1872 iPseU_CNN:0.81531810760498;iRNA_PseU:0 1873 chr4 3031065 3031065 1 + C A THCA 3031065 - 3031045 3031085 41 GGTATCATTCTTGATTCTTTGATCGACCTCCTCCCATTTGA GGTATCATTCTTGATTCTTTTATCGACCTCCTCCCATTTGA Direct Gain 0 0.968699186080924 0 0.994199335575104 prediction 0.937398372161847 Functional Gain - GRK4 ENSG00000125388 CDS Human protein_coding chr4:3031065 chr4:3031065 nonsynonymous SNV 0.222 0 21 hPsi_associated_SNPs_102913 0 0 0 0 0 Cytosol 0 0.438718571646251 0.988398671150208 0 hPsi_site_1873 iPseU_CNN:0.988398671150208;iRNA_PseU:0 1874 chr4 86921759 86921759 1 + G A UCEC 86921759 - 86921739 86921779 41 CATGTCATTTCTTTTCTCGGCATCTTCTTTTGCTCGCTCGG CATGTCATTTCTTTTCTCGGTATCTTCTTTTGCTCGCTCGG Direct Gain 0 0.968691500544836 0 0.999802470207214 prediction 0.937383001089673 Functional Gain - ARHGAP24 ENSG00000138639 CDS Human protein_coding chr4:86921759 chr4:86921759 nonsynonymous SNV 0.885 4 21 hPsi_associated_SNPs_102914 0 0 0 0 0 Cytosol 0 0.438719152165881 0.999604940414428 0 hPsi_site_1874 iPseU_CNN:0.999604940414428;iRNA_PseU:0 1875 chr12 107109192 107109192 1 + G T LUSC 107109192 + 107109172 107109212 41 TTATAGGCATCTCGAACAGTGATCCACAGTGCAGACATCAC TTATAGGCATCTCGAACAGTTATCCACAGTGCAGACATCAC Direct Gain 0 0.968689369992082 0 0.98842442035675 prediction 0.937378739984165 Functional Gain - RFX4 ENSG00000111783 CDS Human protein_coding chr12:107109192 chr12:107109192 synonymous SNV . 0 21 hPsi_associated_SNPs_102915 0 0 0 0 1 nucleoplasm 0 0.438725434176625 0.9768488407135 0 hPsi_site_1875 iPseU_CNN:0.9768488407135;iRNA_PseU:0 1876 chr3 2908581 2908581 1 + G A COAD 2908581 - 2908561 2908601 41 CCCAGGACCTTGTGGTTTGTCACGGTATTGGTAACCACACA CCCAGGACCTTGTGGTTTGTTACGGTATTGGTAACCACACA Direct Gain 0 0.968684060429761 0 0.999699950218201 prediction 0.937368120859521 Functional Gain - CNTN4 ENSG00000144619 CDS Human protein_coding chr3:2908581 chr3:2908581 synonymous SNV . 0 21 hPsi_associated_SNPs_102916 0 0 0 0 0 exosome 0 0.438743983818367 0.999399900436402 0 hPsi_site_1876 iPseU_CNN:0.999399900436402;iRNA_PseU:0 1877 chr22 31668686 31668686 1 + G A BLCA 31668686 - 31668666 31668706 41 GGGCTTCAGGACTCACCGTTCAGCATCTCAGGGGCCATCCA GGGCTTCAGGACTCACCGTTTAGCATCTCAGGGGCCATCCA Direct Gain 0 0.968678371834485 0 0.999973654747009 prediction 0.93735674366897 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31668686 chr22:31668686 synonymous SNV . 0 21 hPsi_associated_SNPs_102917 0 0 0 0 0 Cytosol 0 0.438710276638002 0.999947309494018 0 hPsi_site_1877 iPseU_CNN:0.999947309494018;iRNA_PseU:0 1878 chr19 6374914 6374914 1 + C A LIHC 6374914 - 6374894 6374934 41 GGAGGGAGCGGCAGATCACGGAGATGCGCCGGCCCCGGGGA GGAGGGAGCGGCAGATCACGTAGATGCGCCGGCCCCGGGGA Direct Gain 0 0.968676383147733 0 0.999250292778015 prediction 0.937352766295467 Functional Gain - ALKBH7 ENSG00000125652 CDS Human protein_coding chr19:6374914 chr19:6374914 nonsynonymous SNV 0.951 4 21 hPsi_associated_SNPs_102918 0 0 0 0 0 Ribosome 0 0.438719091232282 0.99850058555603 0 hPsi_site_1878 iPseU_CNN:0.99850058555603;iRNA_PseU:0 1879 chr5 140202447 140202447 1 + C A LUAD 140202447 - 140202427 140202467 41 AGCAATGACCGTGCTGAGTGGAGCGTCCTCTTTGACAGGCA AGCAATGACCGTGCTGAGTGTAGCGTCCTCTTTGACAGGCA Direct Gain 0 0.968675920089399 0 0.97051727771759 prediction 0.937351840178799 Functional Gain - PCDHA5 ENSG00000204965 CDS Human protein_coding chr5:140202447 chr5:140202447 nonsynonymous SNV 0.288 0 21 hPsi_associated_SNPs_102919 0 0 0 0 0 nucleus 0 0.438709939710232 0.94103455543518 0 hPsi_site_1879 iPseU_CNN:0.94103455543518;iRNA_PseU:0 1880 chr11 69972260 69972260 1 + C A UCEC 69972260 - 69972240 69972280 41 GTGGCGCATCCGTACAGGAAGACAATGATTCCCACGATGGA GTGGCGCATCCGTACAGGAATACAATGATTCCCACGATGGA Direct Gain 0 0.968619264356885 0 0.448976665735245 prediction 0.93723852871377 Functional Gain - ANO1 ENSG00000131620 CDS Human protein_coding chr11:69972260 chr11:69972260 synonymous SNV . 0 21 hPsi_associated_SNPs_102920 0 0 0 0 0 Cytosol 0 0.43871960538727 0 0 hPsi_site_1880 iPseU_CNN:0;iRNA_PseU:0 1881 chr4 110932610 110932610 1 + G T BLCA 110932610 + 110932590 110932630 41 CCAAATGGAGCTGACTCAGTGAAAACTGGAATTAAAAGGAA CCAAATGGAGCTGACTCAGTTAAAACTGGAATTAAAAGGAA Direct Gain 0 0.968618783860879 0 0.408461809158325 prediction 0.937237567721758 Functional Gain - EGF ENSG00000138798 CDS Human protein_coding chr4:110932610 chr4:110932610 stoploss 0.005 0 21 hPsi_associated_SNPs_102921 0 0 0 1 0 membrane 0 0.438718481078133 0 0 hPsi_site_1881 iPseU_CNN:0;iRNA_PseU:0 1882 chr11 1995223 1995223 1 + G A rs217719 1995223 - 1995203 1995243 41 ACCACAGAACAGCATCTGGGCACCTACCTGTTGGCCATGGG ACCACAGAACAGCATCTGGGTACCTACCTGTTGGCCATGGG Direct Gain 0 0.968595088677561 0 0.999986529350281 prediction 0.937190177355121 Functional Gain - MRPL23;MRPL23-AS1 ENSG00000214026 intronic Human protein_coding chr11:1995223 chr11:1995223 . . 0 21 hPsi_associated_SNPs_102922 0 1 0 0 0 unknown 0 0.437924498308134 0.999973058700562 0 hPsi_site_1882 iPseU_CNN:0.999973058700562;iRNA_PseU:0 1883 chr22 24314716 24314716 1 + G A rs113258960 24314716 - 24314696 24314736 41 GTATAGACTTTATTCCTTGTCATTATTCCCTAAACAATACA GTATAGACTTTATTCCTTGTTATTATTCCCTAAACAATACA Direct Gain 0 0.96857402435549 0 0.951815485954285 prediction 0.937148048710979 Functional Gain - DDTL ENSG00000099974 UTR3 Human protein_coding chr22:24314716 chr22:24314716 . . 0 21 hPsi_associated_SNPs_102923 0 0 0 0 0 Ribosome 0 0.438718592568711 0.90363097190857 0 hPsi_site_1883 iPseU_CNN:0.90363097190857;iRNA_PseU:0 1884 chr1 155851053 155851053 1 + G A UCEC 155851053 - 155851033 155851073 41 GGGTTCAAAGTGCACTTCTTCACATGGGTTTTCTTCTTGGC GGGTTCAAAGTGCACTTCTTTACATGGGTTTTCTTCTTGGC Direct Gain 0 0.968572748543127 0 0.999990105628967 prediction 0.937145497086254 Functional Gain - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155851053 chr1:155851053 synonymous SNV . 0 21 hPsi_associated_SNPs_102924 0 0 0 0 0 Nucleus 0 0.438712783040069 0.999980211257934 0 hPsi_site_1884 iPseU_CNN:0.999980211257934;iRNA_PseU:0 1885 chr17 72929583 72929583 1 + C T rs150863790 72929583 + 72929563 72929603 41 AACATCTGCCTCCCTTTCGGCATCTTCTACCGCATGCACGC AACATCTGCCTCCCTTTCGGTATCTTCTACCGCATGCACGC Direct Gain 0 0.968572709452877 0 0.959080398082733 prediction 0.937145418905753 Functional Gain - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72929583 chr17:72929583 synonymous SNV . 0 21 hPsi_associated_SNPs_102925 0 0 0 0 0 exosome 0 0.43871859264623 0.918160796165466 0 hPsi_site_1885 iPseU_CNN:0.918160796165466;iRNA_PseU:0 1886 chr8 144733279 144733279 1 + C A UCEC 144733279 - 144733259 144733299 41 AGTGAGATGGGCTTTCTGGAGAAACGCTTTCCCACATTCCT AGTGAGATGGGCTTTCTGGATAAACGCTTTCCCACATTCCT Direct Gain 0 0.968568431658548 0 0.999504804611206 prediction 0.937136863317096 Functional Gain - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144733279 chr8:144733279 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_102926 0 0 0 0 0 cytosol 0 0.438675064784569 0.999009609222412 0 hPsi_site_1886 iPseU_CNN:0.999009609222412;iRNA_PseU:0 1887 chr11 1218813 1218813 1 + G A rs562203183 1218813 - 1218793 1218833 41 TGTGGGGCTGCAGGCACAGGCACGAAGCCGGGCAGGGGGCA TGTGGGGCTGCAGGCACAGGTACGAAGCCGGGCAGGGGGCA Direct Gain 0 0.968560523376383 0 0.999986886978149 prediction 0.937121046752766 Functional Gain - MUC5AC ENSG00000215182;ENSG00000117983 intergenic Human other chr11:1218813 chr11:1218813 . . 0 21 hPsi_associated_SNPs_102927 0 0 0 0 0 exosome 0 0.438718592995102 0.999973773956298 0 hPsi_site_1887 iPseU_CNN:0.999973773956298;iRNA_PseU:0 1888 chr1 247587233 247587233 1 + G A UCEC 247587233 - 247587213 247587253 41 GTGTGTAGCGTTTGTTGAGGCTCACACTCTCACCCAGACGG GTGTGTAGCGTTTGTTGAGGTTCACACTCTCACCCAGACGG Direct Gain 0 0.96854826889282 0 0.443023264408112 prediction 0.937096537785639 Functional Gain - NLRP3 ENSG00000162711 CDS Human protein_coding chr1:247587233 chr1:247587233 nonsynonymous SNV 0.965 1 21 hPsi_associated_SNPs_102928 0 0 0 0 0 Nucleus 0 0.446563639197654 0 0 hPsi_site_1888 iPseU_CNN:0;iRNA_PseU:0 1889 chr1 92789090 92789090 1 + G A BLCA 92789090 - 92789070 92789110 41 AGTGCTAGAAGAACTAGATTCATATTGCTTTTCAAAGTGGC AGTGCTAGAAGAACTAGATTTATATTGCTTTTCAAAGTGGC Direct Gain 0 0.968546772903094 0 0.0513619780540466 prediction 0.937093545806187 Functional Gain - RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92789090 chr1:92789090 nonsynonymous SNV 0.608 0 21 hPsi_associated_SNPs_102929 0 0 0 0 0 Cytosol 0 0.438664990252426 0 0 hPsi_site_1889 iPseU_CNN:0;iRNA_PseU:0 1890 chr11 60783189 60783189 1 + C T SKCM 60783189 + 60783169 60783209 41 TCTGTTCTCTCCCCAGTTTTCATGCTGCCCATCCAGGTCCA TCTGTTCTCTCCCCAGTTTTTATGCTGCCCATCCAGGTCCA Direct Gain 0 0.968545371475271 0 0.755515098571777 prediction 0.937090742950543 Functional Gain - CD6 ENSG00000013725 CDS Human protein_coding chr11:60783189 chr11:60783189 synonymous SNV . 0 21 hPsi_associated_SNPs_102930 0 0 0 0 1 exosome 0 0.438718723228665 0.511030197143554 0 hPsi_site_1890 iPseU_CNN:0.511030197143554;iRNA_PseU:0 1891 chr2 234580786 234580786 1 + C A BLCA 234580786 - 234580766 234580806 41 TCTTCACTGTGCAATTCAGTGATCTTCCCAGTTGCCAACTC TCTTCACTGTGCAATTCAGTTATCTTCCCAGTTGCCAACTC Direct Gain 0 0.968543695846237 0 0.994983196258545 prediction 0.937087391692473 Functional Gain - UGT1A9 ENSG00000241119;ENSG00000241635 CDS Human other chr2:234580786 chr2:234580786 stopgain 0.000 0 21 hPsi_associated_SNPs_102931 0 0 0 0 0 exosome 0 0.43338705113062 0.98996639251709 0 hPsi_site_1891 iPseU_CNN:0.98996639251709;iRNA_PseU:0 1892 chr19 54489904 54489904 1 + A T rs367794075 54489904 + 54489884 54489924 41 TGGGAGGCTGAGAAAGAAGGATCACTTGAACCCAGGAGGCA TGGGAGGCTGAGAAAGAAGGTTCACTTGAACCCAGGAGGCA Direct Gain 0 0.968543219128489 0 0.0706441402435303 prediction 0.937086438256977 Functional Gain - CACNG8 ENSG00000142408 UTR3 Human protein_coding chr19:54489904 chr19:54489904 . . 0 21 hPsi_associated_SNPs_102932 0 0 0 0 0 exosome 0 0.438716843375077 0 0 hPsi_site_1892 iPseU_CNN:0;iRNA_PseU:0 1893 chr20 34820289 34820289 1 + C A rs8122857 34820289 - 34820269 34820309 41 AGGGGGAATGGGGATAGCCTGATGTCACATGGTGAGTTAGG AGGGGGAATGGGGATAGCCTTATGTCACATGGTGAGTTAGG Direct Gain 0 0.968533978213534 0 0.980086803436279 prediction 0.937067956427068 Functional Gain - EPB41L1 ENSG00000088367 UTR3 Human protein_coding chr20:34820289 chr20:34820289 . . 0 21 hPsi_associated_SNPs_102933 0 0 0 0 0 Cytoplasm 0 0.438719511458903 0.960173606872558 0 hPsi_site_1893 iPseU_CNN:0.960173606872558;iRNA_PseU:0 1894 chr2 33045934 33045934 1 + G A rs541406110 33045934 - 33045914 33045954 41 GGTGTCCATAGCTGTTATGTCATCAGCTAATTCCCTGGACA GGTGTCCATAGCTGTTATGTTATCAGCTAATTCCCTGGACA Direct Gain 0 0.968532783554788 0 0.426751464605331 prediction 0.937065567109577 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33045934 chr2:33045934 nonsynonymous SNV 0.235 1 21 hPsi_associated_SNPs_102934 0 0 0 0 0 Nucleus 0 0.438753451209563 0 0 hPsi_site_1894 iPseU_CNN:0;iRNA_PseU:0 1895 chr1 33236757 33236757 1 + C T BLCA 33236757 + 33236737 33236777 41 CCCCTGGGTGACAGGTTTGTCATACCTCCTCACCCCAAGGT CCCCTGGGTGACAGGTTTGTTATACCTCCTCACCCCAAGGT Direct Gain 0 0.96852630292001 0 0.301587820053101 prediction 0.937052605840019 Functional Gain - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33236757 chr1:33236757 synonymous SNV . 0 21 hPsi_associated_SNPs_102935 0 0 1 0 0 Ribosome 0 0.438717442456184 0 0 hPsi_site_1895 iPseU_CNN:0;iRNA_PseU:0 1896 chr5 147820005 147820005 1 + A T SKCM 147820005 + 147819985 147820025 41 AGAGAGCTCATTAAATATGAATTCTTCCCTGAAGCCACTCG AGAGAGCTCATTAAATATGATTTCTTCCCTGAAGCCACTCG Direct Gain 0 0.968525683011109 0 0.999836206436157 prediction 0.937051366022219 Functional Gain - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820005 chr5:147820005 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102936 0 0 1 0 2 Ribosome 0 0.438724418196658 0.999672412872314 0 hPsi_site_1896 iPseU_CNN:0.999672412872314;iRNA_PseU:0 1897 chr19 56129074 56129074 1 + T A rs111566976 56129074 - 56129054 56129094 41 AAGTGCTAAGAGGGAGCTGTATCATGACCATCAGTCTGCAC AAGTGCTAAGAGGGAGCTGTTTCATGACCATCAGTCTGCAC Direct Gain 0 0.9684942849442 0 0.996310591697693 prediction 0.9369885698884 Functional Gain - ZNF865 ENSG00000261221 downstream Human protein_coding chr19:56129074 chr19:56129074 . . 0 21 hPsi_associated_SNPs_102937 0 0 0 0 0 chromatin 0 0.438719092926656 0.992621183395386 0 hPsi_site_1897 iPseU_CNN:0.992621183395386;iRNA_PseU:0 1898 chr11 7059828 7059828 1 + C T SKCM 7059828 + 7059808 7059848 41 TTTGGACAAGATGGCAGATTCATCATCATCTTCTTTCTTTC TTTGGACAAGATGGCAGATTTATCATCATCTTCTTTCTTTC Direct Gain 0 0.968418651784714 0 0.00651773810386658 prediction 0.936837303569429 Functional Gain - NLRP14 ENSG00000158077 CDS Human protein_coding chr11:7059828 chr11:7059828 nonsynonymous SNV 0.133 1 21 hPsi_associated_SNPs_102938 0 0 0 0 1 cytosol 0 0.438707211604822 0 0 hPsi_site_1898 iPseU_CNN:0;iRNA_PseU:0 1899 chr20 43043227 43043227 1 + G A LUAD 43043227 - 43043207 43043247 41 AGAACCAGCAGCTGCTCCTTCATGGACTCACACACATCTGC AGAACCAGCAGCTGCTCCTTTATGGACTCACACACATCTGC Direct Gain 0 0.968402532804571 0 0.98515397310257 prediction 0.936805065609142 Functional Gain - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43043227 chr20:43043227 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102939 0 0 0 0 0 Ribosome 0 0.438718628478926 0.97030794620514 0 hPsi_site_1899 iPseU_CNN:0.97030794620514;iRNA_PseU:0 1900 chr1 90179638 90179638 1 + G A LUSC 90179638 - 90179618 90179658 41 ATCCAGGGGGGGAGTTCCCTCATGTCATCAAACTTGACGCT ATCCAGGGGGGGAGTTCCCTTATGTCATCAAACTTGACGCT Direct Gain 0 0.96839615624322 0 0.0891273617744446 prediction 0.93679231248644 Functional Gain - LRRC8C ENSG00000171488 CDS Human protein_coding chr1:90179638 chr1:90179638 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_102940 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593673235 0 0 hPsi_site_1900 iPseU_CNN:0;iRNA_PseU:0 1901 chr17 47886541 47886541 1 + G A HNSC 47886541 - 47886521 47886561 41 GGTTGCATGCCTGTTGTTGTCATCTTGCCTGTGAGACAGCA GGTTGCATGCCTGTTGTTGTTATCTTGCCTGTGAGACAGCA Direct Gain 0 0.968390993103348 0 0.993109583854675 prediction 0.936781986206697 Functional Gain - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47886541 chr17:47886541 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102941 0 0 0 0 0 Cytosol 0 0.438727303937038 0.98621916770935 0 hPsi_site_1901 iPseU_CNN:0.98621916770935;iRNA_PseU:0 1902 chr2 132258555 132258555 1 + C A UCEC 132258555 - 132258535 132258575 41 TCAGGGAGGATGCACTCCTGGATGGACGCCTTCACAGGACC TCAGGGAGGATGCACTCCTGTATGGACGCCTTCACAGGACC Direct Gain 0 0.968374617293501 0 0.996547818183899 prediction 0.936749234587002 Functional Gain - LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132258555 chr2:132258555 . . 0 21 hPsi_associated_SNPs_102942 0 0 0 0 0 unknown 0 0.438717866080836 0.993095636367798 0 hPsi_site_1902 iPseU_CNN:0.993095636367798;iRNA_PseU:0 1903 chr7 142459677 142459677 1 + G A GBM 142459677 - 142459657 142459697 41 GGCTGCATTGATGAACTGCTCATTCCCCTCCAGGACTTCGA GGCTGCATTGATGAACTGCTTATTCCCCTCCAGGACTTCGA Direct Gain 0 0.968372747545284 0 0.903322219848633 prediction 0.936745495090567 Functional Gain - PRSS1 ENSG00000204983 CDS Human protein_coding chr7:142459677 chr7:142459677 nonsynonymous SNV 0.168 5 21 hPsi_associated_SNPs_102943 0 0 0 0 0 Cytosol 0 0.438718135976568 0.806644439697266 0 hPsi_site_1903 iPseU_CNN:0.806644439697266;iRNA_PseU:0 1904 chr11 55322769 55322769 1 + C T SKCM 55322769 + 55322749 55322789 41 ATGGCGGCAATATTTTATATCATCTTAAATCCCTTGCTCAA ATGGCGGCAATATTTTATATTATCTTAAATCCCTTGCTCAA Direct Gain 0 0.968351239480342 0 0.99963116645813 prediction 0.936702478960683 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322769 chr11:55322769 synonymous SNV . 0 21 hPsi_associated_SNPs_102944 0 0 0 0 0 unknown 0 0.438724835489456 0.99926233291626 0 hPsi_site_1904 iPseU_CNN:0.99926233291626;iRNA_PseU:0 1905 chr1 41012608 41012608 1 + C T BLCA 41012608 + 41012588 41012628 41 GGAAGGCACACCTTGCAACTCATCAGAAAATTCATAATGGA GGAAGGCACACCTTGCAACTTATCAGAAAATTCATAATGGA Direct Gain 0 0.96834899113441 0 0.00512182712554932 prediction 0.936697982268819 Functional Gain - ZNF684 ENSG00000117010 CDS Human protein_coding chr1:41012608 chr1:41012608 nonsynonymous SNV 0.993 4 21 hPsi_associated_SNPs_102945 0 0 0 0 0 nucleoplasm 0 0.438718592656718 0 0 hPsi_site_1905 iPseU_CNN:0;iRNA_PseU:0 1906 chr13 58208610 58208610 1 + G T HNSC 58208610 + 58208590 58208630 41 AGATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCT AGATCGACCCGTCCAGCGGCTAGATCCGCACGCTGCACCCT Direct Gain 0 0.968345530760376 0 0.998562335968018 prediction 0.936691061520752 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58208610 chr13:58208610 stopgain 1.000 1 21 hPsi_associated_SNPs_102946 0 0 0 0 0 exosome 0 0.438723462645357 0.997124671936036 0 hPsi_site_1906 iPseU_CNN:0.997124671936036;iRNA_PseU:0 1907 chr15 44057707 44057707 1 + C T BLCA 44057707 + 44057687 44057727 41 GTTTGAGGACAAGACTGTGGCATATACAGAGCAAAAAATGA GTTTGAGGACAAGACTGTGGTATATACAGAGCAAAAAATGA Direct Gain 0 0.968345247826283 0 0.999575614929199 prediction 0.936690495652566 Functional Gain - PDIA3 ENSG00000167004 CDS Human protein_coding chr15:44057707 chr15:44057707 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102947 0 0 1 0 2 Endoplasmic reticulum 0 0.438717413789249 0.999151229858398 0 hPsi_site_1907 iPseU_CNN:0.999151229858398;iRNA_PseU:0 1908 chr6 36168265 36168265 1 + G A UCEC 36168265 - 36168245 36168285 41 AGTAATGATTTTGAGTGGGTCATAGATGCTGATACGATGCA AGTAATGATTTTGAGTGGGTTATAGATGCTGATACGATGCA Direct Gain 0 0.968341781040161 0 0.12978383898735 prediction 0.936683562080322 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36168265 chr6:36168265 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102948 0 0 0 0 0 chromatin 0 0.470799739304455 0 0 hPsi_site_1908 iPseU_CNN:0;iRNA_PseU:0 1909 chr3 50223354 50223354 1 + C T LUAD 50223354 + 50223334 50223374 41 GTGGCGTCAGCCGTGGGTGTCACACACCTGAGCCTGCACCG GTGGCGTCAGCCGTGGGTGTTACACACCTGAGCCTGCACCG Direct Gain 0 0.968321917097287 0 0.987591862678528 prediction 0.936643834194574 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50223354 chr3:50223354 synonymous SNV . 0 21 hPsi_associated_SNPs_102949 0 0 1 0 1 Endoplasmic reticulum 0 0.438724183810959 0.975183725357056 0 hPsi_site_1909 iPseU_CNN:0.975183725357056;iRNA_PseU:0 1910 chr1 90048678 90048678 1 + C T SKCM 90048678 + 90048658 90048698 41 AGCATTTTGTGGCCATCCTTCACAAGTGCTTCGATTCTCCA AGCATTTTGTGGCCATCCTTTACAAGTGCTTCGATTCTCCA Direct Gain 0 0.96831294544655 0 0.989415347576141 prediction 0.9366258908931 Functional Gain - LRRC8B ENSG00000197147 CDS Human protein_coding chr1:90048678 chr1:90048678 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102950 0 0 1 0 0 Endoplasmic reticulum 0 0.438718655925884 0.978830695152282 0 hPsi_site_1910 iPseU_CNN:0.978830695152282;iRNA_PseU:0 1911 chr19 15121742 15121742 1 + G A COAD 15121742 - 15121722 15121762 41 TCCTGCCCGCAGCGATCGGTCAGAATGTGCGCGGTCCTCGC TCCTGCCCGCAGCGATCGGTTAGAATGTGCGCGGTCCTCGC Direct Gain 0 0.968305191325061 0 0.999916076660156 prediction 0.936610382650122 Functional Gain - CCDC105 ENSG00000160994 CDS Human protein_coding chr19:15121742 chr19:15121742 synonymous SNV . 0 21 hPsi_associated_SNPs_102951 0 0 0 0 0 unknown 0 0.438762300554607 0.999832153320312 0 hPsi_site_1911 iPseU_CNN:0.999832153320312;iRNA_PseU:0 1912 chr9 37861326 37861326 1 + G A BLCA 37861326 - 37861306 37861346 41 AAGTTCACTGCACTGTTTGTCAAATCCCAACAAGCGAATCC AAGTTCACTGCACTGTTTGTTAAATCCCAACAAGCGAATCC Direct Gain 0 0.968292556765278 0 0.999919533729553 prediction 0.936585113530555 Functional Gain - DCAF10 ENSG00000122741 CDS Human protein_coding chr9:37861326 chr9:37861326 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102952 0 0 0 0 0 Ribosome 0 0.438792090189658 0.999839067459106 0 hPsi_site_1912 iPseU_CNN:0.999839067459106;iRNA_PseU:0 1913 chr7 794332 794332 1 + G A HNSC 794332 - 794312 794352 41 GGGAGCAGCTGTGCCGACTTCACTCGGGTCCCCACCACCCA GGGAGCAGCTGTGCCGACTTTACTCGGGTCCCCACCACCCA Direct Gain 0 0.968287105659249 0 0.999872326850891 prediction 0.936574211318498 Functional Gain - DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:794332 chr7:794332 synonymous SNV . 0 21 hPsi_associated_SNPs_102953 0 0 0 0 0 Ribosome 0 0.438710457755405 0.999744653701782 0 hPsi_site_1913 iPseU_CNN:0.999744653701782;iRNA_PseU:0 1914 chr15 96875768 96875768 1 + G A UCEC 96875768 - 96875748 96875788 41 AGAGGCCGATACCTTCCCGTCTCATGCCCACTTTGAGGCAC AGAGGCCGATACCTTCCCGTTTCATGCCCACTTTGAGGCAC Direct Gain 0 0.968285746803701 0 0.999990582466125 prediction 0.936571493607401 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875768 chr15:96875768 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102954 0 0 0 0 0 Cytoplasm 0 0.438739514759604 0.99998116493225 0 hPsi_site_1914 iPseU_CNN:0.99998116493225;iRNA_PseU:0 1915 chr5 31799815 31799815 1 + G T LUSC 31799815 + 31799795 31799835 41 GGCAGCTGATGGTTGGAGTTGATGTCAGTGGGGCCAGGTAA GGCAGCTGATGGTTGGAGTTTATGTCAGTGGGGCCAGGTAA Direct Gain 0 0.968282535159484 0 0.985283970832825 prediction 0.936565070318968 Functional Gain - PDZD2 ENSG00000133401 CDS Human protein_coding chr5:31799815 chr5:31799815 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102955 0 0 0 0 1 chromatin 0 0.43891251417725 0.97056794166565 0 hPsi_site_1915 iPseU_CNN:0.97056794166565;iRNA_PseU:0 1916 chr7 6629917 6629917 1 + G A BLCA 6629917 - 6629897 6629937 41 AGCGAGTGGCGGATGTCGCTCATGGTGCGGCCGCCGCGGCC AGCGAGTGGCGGATGTCGCTTATGGTGCGGCCGCCGCGGCC Direct Gain 0 0.968279610697441 0 0.99775230884552 prediction 0.936559221394881 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6629917 chr7:6629917 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102956 0 0 0 0 0 chromatin 0 0.268051975398242 0.99550461769104 0 hPsi_site_1916 iPseU_CNN:0.99550461769104;iRNA_PseU:0 1917 chr6 135509014 135509014 1 + G A LUAD 135509014 - 135508994 135509034 41 ATTGGCAATAACTTTCCAGTCATCTGTTCCATTCTGTTCCA ATTGGCAATAACTTTCCAGTTATCTGTTCCATTCTGTTCCA Direct Gain 0 0.968278142786454 0 0.495077133178711 prediction 0.936556285572908 Functional Gain - MYB ENSG00000118513 CDS Human protein_coding chr6:135509014 chr6:135509014 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102957 0 0 0 0 0 Nucleus 0 0.410875870560249 0 0 hPsi_site_1917 iPseU_CNN:0;iRNA_PseU:0 1918 chr20 2378575 2378575 1 + C T rs144101264 2378575 + 2378555 2378595 41 GGGGAGCAGTTTGAGGAGGACATCCTGAACATCTGCCTCTC GGGGAGCAGTTTGAGGAGGATATCCTGAACATCTGCCTCTC Direct Gain 0 0.968264061009943 0 0.999992370605469 prediction 0.936528122019887 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2378575 chr20:2378575 synonymous SNV . 0 21 hPsi_associated_SNPs_102958 1 0 0 0 1 exosome 0 0.438710015219512 0.999984741210938 0 hPsi_site_1918 iPseU_CNN:0.999984741210938;iRNA_PseU:0 1919 chr21 46910218 46910218 1 + G T STAD 46910218 + 46910198 46910238 41 GGAGCAGATGGAGTCCCCGGGTTCCCCGGCCTCCCTGGCAG GGAGCAGATGGAGTCCCCGGTTTCCCCGGCCTCCCTGGCAG Direct Gain 0 0.968257795507336 0 0.976402997970581 prediction 0.936515591014673 Functional Gain - COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46910218 chr21:46910218 synonymous SNV . 0 21 hPsi_associated_SNPs_102959 0 0 1 0 2 Nucleus 0 0.438718592995927 0.952805995941162 0 hPsi_site_1919 iPseU_CNN:0.952805995941162;iRNA_PseU:0 1920 chr19 55221989 55221989 1 + C T COAD 55221989 + 55221969 55222009 41 CAGTCACGGGAGCAGTTGGACACTTTCCTTCTGACCAAGGA CAGTCACGGGAGCAGTTGGATACTTTCCTTCTGACCAAGGA Direct Gain 0 0.968250380939287 0 0.99999988079071 prediction 0.936500761878573 Functional Gain - LILRP2 ENSG00000170858 ncRNA_exonic Human transcribed_processed_pseudogene chr19:55221989 chr19:55221989 . . 0 21 hPsi_associated_SNPs_102960 0 0 0 0 0 unknown 0 0.438851584380099 0.99999976158142 0 hPsi_site_1920 iPseU_CNN:0.99999976158142;iRNA_PseU:0 1921 chr20 3838402 3838402 1 + G A BLCA 3838402 - 3838382 3838422 41 GTCCGCGAGATCAACTAGCTCACAGCCCCTCAGTGCCGCAA GTCCGCGAGATCAACTAGCTTACAGCCCCTCAGTGCCGCAA Direct Gain 0 0.968241668008292 0 0.999997496604919 prediction 0.936483336016584 Functional Gain - MAVS ENSG00000088888 CDS Human protein_coding chr20:3838402 chr20:3838402 nonsynonymous SNV 0.534 4 21 hPsi_associated_SNPs_102961 0 0 0 0 0 Nucleus 0 0.438718593351814 0.999994993209838 0 hPsi_site_1921 iPseU_CNN:0.999994993209838;iRNA_PseU:0 1922 chr2 143959748 143959748 1 + G T LUAD 143959748 + 143959728 143959768 41 CACAGCATATCTTGAAAGATGTCATTCCTCCATTGGAACAA CACAGCATATCTTGAAAGATTTCATTCCTCCATTGGAACAA Direct Gain 0 0.968240147771383 0 0.40689542889595 prediction 0.936480295542767 Functional Gain - ARHGAP15 ENSG00000075884 CDS Human protein_coding chr2:143959748 chr2:143959748 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_102962 0 0 0 0 2 Cytosol 0 0.438628017386588 0 0 hPsi_site_1922 iPseU_CNN:0;iRNA_PseU:0 1923 chr2 108475895 108475895 1 + C T LUAD 108475895 + 108475875 108475915 41 TAAAGGAGAAATGTAATTCTCACCACAGCTCCTATCAGCCG TAAAGGAGAAATGTAATTCTTACCACAGCTCCTATCAGCCG Direct Gain 0 0.968234748549403 0 0.633823037147522 prediction 0.936469497098806 Functional Gain - RGPD4 ENSG00000196862 CDS Human protein_coding chr2:108475895 chr2:108475895 nonsynonymous SNV 0.941 0 21 hPsi_associated_SNPs_102963 0 0 0 0 1 membrane 0 0.436716280510488 0.267646074295044 0 hPsi_site_1923 iPseU_CNN:0.267646074295044;iRNA_PseU:0 1924 chr17 7186840 7186840 1 + G T LUSC 7186840 + 7186820 7186860 41 GGCTGGGGAGGCAGGGGCCTGAGGGACCCAGCTCCATCCCT GGCTGGGGAGGCAGGGGCCTTAGGGACCCAGCTCCATCCCT Direct Gain 0 0.968230641423635 0 0.997430682182312 prediction 0.93646128284727 Functional Gain - SLC2A4 ENSG00000181856 CDS Human protein_coding chr17:7186840 chr17:7186840 stopgain 0.915 0 21 hPsi_associated_SNPs_102964 0 0 0 0 1 Nucleus 0 0.438718593627871 0.994861364364624 0 hPsi_site_1924 iPseU_CNN:0.994861364364624;iRNA_PseU:0 1925 chr11 129993553 129993553 1 + G A rs117994299 129993553 - 129993533 129993573 41 AGGTCGAAGTACCAACGAGGCATCACGGCCCGGCAGGGCCC AGGTCGAAGTACCAACGAGGTATCACGGCCCGGCAGGGCCC Direct Gain 0 0.968208195556925 0 0.994788408279419 prediction 0.93641639111385 Functional Gain - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129993553 chr11:129993553 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102965 0 0 0 0 0 Endoplasmic reticulum 0 0.438692365604532 0.989576816558838 0 hPsi_site_1925 iPseU_CNN:0.989576816558838;iRNA_PseU:0 1926 chr5 32074631 32074631 1 + C T LUSC 32074631 + 32074611 32074651 41 TGAGGCCAAGCCCAGTGGCTCACAGACAGTGAACCTGACTG TGAGGCCAAGCCCAGTGGCTTACAGACAGTGAACCTGACTG Direct Gain 0 0.968206344374474 0 0.209675192832947 prediction 0.936412688748948 Functional Gain - PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32074631 chr5:32074631 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_102966 0 0 0 0 0 chromatin 0 0.43873745157654 0 0 hPsi_site_1926 iPseU_CNN:0;iRNA_PseU:0 1927 chr8 125498960 125498960 1 + G A UCEC 125498960 - 125498940 125498980 41 GGACTGCAGTTAATAAAAGGCACATGTTTCTACTTAAGCGA GGACTGCAGTTAATAAAAGGTACATGTTTCTACTTAAGCGA Direct Gain 0 0.968190435809502 0 0.81462824344635 prediction 0.936380871619004 Functional Gain - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125498960 chr8:125498960 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_102967 0 0 0 0 0 Ribosome 0 0.438718591931548 0.6292564868927 0 hPsi_site_1927 iPseU_CNN:0.6292564868927;iRNA_PseU:0 1928 chr3 140167504 140167504 1 + G A SKCM 140167504 - 140167484 140167524 41 CTCAGAGTAGGTCTCCCGGTCACAACCCTTCCCAATGTAAT CTCAGAGTAGGTCTCCCGGTTACAACCCTTCCCAATGTAAT Direct Gain 0 0.968188225383245 0 0.998522639274597 prediction 0.93637645076649 Functional Gain - CLSTN2 ENSG00000158258 CDS Human protein_coding chr3:140167504 chr3:140167504 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_102968 0 0 0 0 0 exosome 0 0.438714536801448 0.997045278549194 0 hPsi_site_1928 iPseU_CNN:0.997045278549194;iRNA_PseU:0 1929 chr5 96219608 96219608 1 + C T UCEC 96219608 + 96219588 96219628 41 AGATACGAAGAGAGAGCAGGCATATTGCACTATCCAACATG AGATACGAAGAGAGAGCAGGTATATTGCACTATCCAACATG Direct Gain 0 0.968185532578601 0 0.714446902275085 prediction 0.936371065157203 Functional Gain - ERAP2 ENSG00000164308 CDS Human protein_coding chr5:96219608 chr5:96219608 nonsynonymous SNV 0.005 1 21 hPsi_associated_SNPs_102969 0 0 0 7 1 exosome 0 0.438815767804848 0.42889380455017 0 hPsi_site_1929 iPseU_CNN:0.42889380455017;iRNA_PseU:0 1930 chr18 72247468 72247468 1 + G T UCEC 72247468 + 72247448 72247488 41 CGTGGATTGCAAATATTGATGACACCCAGTATCTCGCAGCA CGTGGATTGCAAATATTGATTACACCCAGTATCTCGCAGCA Direct Gain 0 0.968177500625243 0 0.999995946884155 prediction 0.936355001250486 Functional Gain - CNDP1 ENSG00000150656 CDS Human protein_coding chr18:72247468 chr18:72247468 nonsynonymous SNV 0.003 2 21 hPsi_associated_SNPs_102970 0 0 0 0 1 exosome 0 0.437837963167289 0.99999189376831 0 hPsi_site_1930 iPseU_CNN:0.99999189376831;iRNA_PseU:0 1931 chr9 2718384 2718384 1 + G A rs201327014 2718384 - 2718364 2718404 41 GCGCGCAGCTCGTGCTGGATCTTGAGCCGTTCGCTCAGCTC GCGCGCAGCTCGTGCTGGATTTTGAGCCGTTCGCTCAGCTC Direct Gain 0 0.968167021471101 0 0.999935507774353 prediction 0.936334042942202 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718384 chr9:2718384 synonymous SNV . 0 21 hPsi_associated_SNPs_102971 0 0 0 0 0 insoluble cytoplasm 0 0.438718609285007 0.999871015548706 0 hPsi_site_1931 iPseU_CNN:0.999871015548706;iRNA_PseU:0 1932 chrX 138633251 138633251 1 + C T SKCM 138633251 + 138633231 138633271 41 ATGTGGAAGAGTTTCTGTTTCACAAACTTCTAAGCTCACCC ATGTGGAAGAGTTTCTGTTTTACAAACTTCTAAGCTCACCC Direct Gain 0 0.968153332888502 0 0.524261593818665 prediction 0.936306665777004 Functional Gain - F9 ENSG00000101981 CDS Human protein_coding chrX:138633251 chrX:138633251 nonsynonymous SNV 0.174 1 21 hPsi_associated_SNPs_102972 0 0 0 0 1 exosome 0 0.438693456641219 0.04852318763733 0 hPsi_site_1932 iPseU_CNN:0.04852318763733;iRNA_PseU:0 1933 chr15 72050291 72050291 1 + G A SKCM 72050291 - 72050271 72050311 41 AGGCTGCTGACATGGTTGGTCATGCACACCACCGAGCGTGT AGGCTGCTGACATGGTTGGTTATGCACACCACCGAGCGTGT Direct Gain 0 0.968131216717189 0 0.99894642829895 prediction 0.936262433434379 Functional Gain - THSD4 ENSG00000187720 CDS Human protein_coding chr15:72050291 chr15:72050291 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102973 0 0 0 0 0 Nucleus 0 0.440353420002215 0.9978928565979 0 hPsi_site_1933 iPseU_CNN:0.9978928565979;iRNA_PseU:0 1934 chr2 10912040 10912040 1 + C T BLCA 10912040 + 10912020 10912060 41 CTGGATTCTGAATATCTCGTCACACTTCTGGTCATCGTCCC CTGGATTCTGAATATCTCGTTACACTTCTGGTCATCGTCCC Direct Gain 0 0.968116174376352 0 0.999830305576324 prediction 0.936232348752704 Functional Gain - ATP6V1C2 ENSG00000143882 CDS Human protein_coding chr2:10912040 chr2:10912040 synonymous SNV . 0 21 hPsi_associated_SNPs_102974 0 0 0 0 2 Endoplasmic reticulum 0 0.438522913963317 0.999660611152648 0 hPsi_site_1934 iPseU_CNN:0.999660611152648;iRNA_PseU:0 1935 chr4 170634366 170634366 1 + G T BLCA 170634366 + 170634346 170634386 41 GACATGAGCCCTTTTACAGTGACAGACCACACCCCAATGGA GACATGAGCCCTTTTACAGTTACAGACCACACCCCAATGGA Direct Gain 0 0.968113338336496 0 0.98762047290802 prediction 0.936226676672992 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170634366 chr4:170634366 synonymous SNV . 0 21 hPsi_associated_SNPs_102975 0 0 1 0 1 Ribosome 0 0.438718612756352 0.97524094581604 0 hPsi_site_1935 iPseU_CNN:0.97524094581604;iRNA_PseU:0 1936 chr19 1388564 1388564 1 + C A BLCA 1388564 - 1388544 1388584 41 GCCATCGGTGGCCACGCTCTGATGGACACCTCGTGCCTGCA GCCATCGGTGGCCACGCTCTTATGGACACCTCGTGCCTGCA Direct Gain 0 0.968111627772049 0 0.840316832065582 prediction 0.936223255544099 Functional Gain - NDUFS7 ENSG00000115286 CDS Human protein_coding chr19:1388564 chr19:1388564 stopgain 0.012 0 21 hPsi_associated_SNPs_102976 0 0 0 0 0 chromatin 0 0.438763773415955 0.680633664131164 0 hPsi_site_1936 iPseU_CNN:0.680633664131164;iRNA_PseU:0 1937 chr14 71517428 71517428 1 + C A SKCM 71517428 - 71517408 71517448 41 TGGAAAGCAGAACCCCATGTGATCTGCCATGGGGCAATATA TGGAAAGCAGAACCCCATGTTATCTGCCATGGGGCAATATA Direct Gain 0 0.968103523578629 0 0.548578023910522 prediction 0.936207047157258 Functional Gain - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71517428 chr14:71517428 synonymous SNV . 0 21 hPsi_associated_SNPs_102977 0 0 0 0 0 Endoplasmic reticulum 0 0.438718590551951 0.097156047821044 0 hPsi_site_1937 iPseU_CNN:0.097156047821044;iRNA_PseU:0 1938 chr13 109661329 109661329 1 + G A UCEC 109661329 - 109661309 109661349 41 TGTTTCCATGGTAACTCCCTCTTGTACACATTCCACTTGCT TGTTTCCATGGTAACTCCCTTTTGTACACATTCCACTTGCT Direct Gain 0 0.968084937758779 0 0.372518301010132 prediction 0.936169875517557 Functional Gain - MYO16 ENSG00000041515 CDS Human protein_coding chr13:109661329 chr13:109661329 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102978 0 0 0 0 0 chromatin 0 0.439059530411534 0 0 hPsi_site_1938 iPseU_CNN:0;iRNA_PseU:0 1939 chr4 30725209 30725209 1 + G T COAD 30725209 + 30725189 30725229 41 GGATGGGGGAGATCCTCCCAGATCTGCCACAGCTACAGTCT GGATGGGGGAGATCCTCCCATATCTGCCACAGCTACAGTCT Direct Gain 0 0.96807032000421 0 0.999935626983643 prediction 0.93614064000842 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30725209 chr4:30725209 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_102979 0 0 1 0 0 Ribosome 0 0.438719554383011 0.999871253967286 0 hPsi_site_1939 iPseU_CNN:0.999871253967286;iRNA_PseU:0 1940 chr16 4910945 4910945 1 + C T COAD 4910945 + 4910925 4910965 41 TGACGGATTTGGACTTGGAGCATCTGCTCAGTGAGTCTCCA TGACGGATTTGGACTTGGAGTATCTGCTCAGTGAGTCTCCA Direct Gain 0 0.968065954989595 0 0.99999988079071 prediction 0.93613190997919 Functional Gain - UBN1 ENSG00000118900 CDS Human protein_coding chr16:4910945 chr16:4910945 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_102980 0 0 1 0 0 Ribosome 0 0.439047232752373 0.99999976158142 0 hPsi_site_1940 iPseU_CNN:0.99999976158142;iRNA_PseU:0 1941 chr1 207890871 207890871 1 + G T COAD 207890871 + 207890851 207890891 41 ACACAGGAACTCCCCTTGGAGATATTCCCTATGGAAAAGAA ACACAGGAACTCCCCTTGGATATATTCCCTATGGAAAAGAA Direct Gain 0 0.96806581162384 0 0.999784529209137 prediction 0.93613162324768 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207890871 chr1:207890871 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_102981 0 0 0 0 1 Endoplasmic reticulum 0 0.438721325831479 0.999569058418274 0 hPsi_site_1941 iPseU_CNN:0.999569058418274;iRNA_PseU:0 1942 chr18 51056987 51056987 1 + G A SKCM 51056987 - 51056967 51057007 41 GTGATGGCATTAAGCTGCTTCATGAGTCCTTCCAAACTTGC GTGATGGCATTAAGCTGCTTTATGAGTCCTTCCAAACTTGC Direct Gain 0 0.96805079161416 0 8.51452350616455e-05 prediction 0.936101583228319 Functional Gain - DCC ENSG00000187323 CDS Human protein_coding chr18:51056987 chr18:51056987 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102982 0 0 0 0 0 exosome 0 0.438772075489053 0 0 hPsi_site_1942 iPseU_CNN:0;iRNA_PseU:0 1943 chr3 49693115 49693115 1 + C T LIHC 49693115 + 49693095 49693135 41 GGCTTGCAGTATGGCTCAGTCACGGACCTGCGTCATCCTAC GGCTTGCAGTATGGCTCAGTTACGGACCTGCGTCATCCTAC Direct Gain 0 0.968043890238132 0 0.998847424983978 prediction 0.936087780476263 Functional Gain - BSN ENSG00000164061 CDS Human protein_coding chr3:49693115 chr3:49693115 synonymous SNV . 0 21 hPsi_associated_SNPs_102983 0 0 0 0 0 chromatin 0 0.438680719363616 0.997694849967956 0 hPsi_site_1943 iPseU_CNN:0.997694849967956;iRNA_PseU:0 1944 chr12 49719364 49719364 1 + C T COAD 49719364 + 49719344 49719384 41 GTGAGGGTGTGAAGAGCTGTCACCTGGGGCGCCAGCCTAGT GTGAGGGTGTGAAGAGCTGTTACCTGGGGCGCCAGCCTAGT Direct Gain 0 0.968016875388006 0 0.986471354961395 prediction 0.936033750776012 Functional Gain - TROAP ENSG00000135451 CDS Human protein_coding chr12:49719364 chr12:49719364 nonsynonymous SNV 0.339 0 21 hPsi_associated_SNPs_102984 0 0 1 0 2 Ribosome 0 0.438718754422723 0.97294270992279 0 hPsi_site_1944 iPseU_CNN:0.97294270992279;iRNA_PseU:0 1945 chr2 166532891 166532891 1 + G A LUSC 166532891 - 166532871 166532911 41 TGTGTTGTCCAGGTCAATGTCATCATCAGAAATGTCATCCA TGTGTTGTCCAGGTCAATGTTATCATCAGAAATGTCATCCA Direct Gain 0 0.968015174300626 0 0.999916434288025 prediction 0.936030348601253 Functional Gain - CSRNP3 ENSG00000178662 CDS Human protein_coding chr2:166532891 chr2:166532891 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_102985 0 0 0 0 0 exosome 0 0.439657952464276 0.99983286857605 0 hPsi_site_1945 iPseU_CNN:0.99983286857605;iRNA_PseU:0 1946 chr17 42428148 42428148 1 + G A OV 42428148 - 42428128 42428168 41 GTTGGGCATTGGGCAGCAGCCATACTTCCCACTGGGCAGCT GTTGGGCATTGGGCAGCAGCTATACTTCCCACTGGGCAGCT Direct Gain 0 0.968010176887383 0 0.994686007499695 prediction 0.936020353774766 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42428148 chr17:42428148 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_102986 0 0 0 0 0 Endoplasmic reticulum 0 0.438718588546065 0.98937201499939 0 hPsi_site_1946 iPseU_CNN:0.98937201499939;iRNA_PseU:0 1947 chr3 184002788 184002788 1 + C T COAD 184002788 + 184002768 184002808 41 GGACTGGCTTGAGTTCCTGTCTTTCTTGCTGTCACCATTGG GGACTGGCTTGAGTTCCTGTTTTTCTTGCTGTCACCATTGG Direct Gain 0 0.967994503177325 0 0.89768385887146 prediction 0.93598900635465 Functional Gain - ECE2 ENSG00000145194 CDS Human protein_coding chr3:184002788 chr3:184002788 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_102987 0 0 0 0 1 Ribosome 0 0.438718964696894 0.79536771774292 0 hPsi_site_1947 iPseU_CNN:0.79536771774292;iRNA_PseU:0 1948 chr3 46750731 46750731 1 + G A GBM 46750731 - 46750711 46750751 41 GTGAGCTCATTGAGGGGTGGCACAGTCTCCAGCTTGTCTGT GTGAGCTCATTGAGGGGTGGTACAGTCTCCAGCTTGTCTGT Direct Gain 0 0.967993438538721 0 0.0458920300006866 prediction 0.935986877077441 Functional Gain - TMIE ENSG00000181585 CDS Human protein_coding chr3:46750731 chr3:46750731 synonymous SNV . 0 21 hPsi_associated_SNPs_102988 0 0 0 0 0 exosome 0 0.438981762528112 0 0 hPsi_site_1948 iPseU_CNN:0;iRNA_PseU:0 1949 chr4 166388935 166388935 1 + G A LUSC 166388935 - 166388915 166388955 41 GGACCACCTTCTTTCTCATTCACGTACACTATCCTATCCAG GGACCACCTTCTTTCTCATTTACGTACACTATCCTATCCAG Direct Gain 0 0.967978812838765 0 0.25815087556839 prediction 0.93595762567753 Functional Gain - CPE ENSG00000109472 CDS Human protein_coding chr4:166388935 chr4:166388935 synonymous SNV . 0 21 hPsi_associated_SNPs_102989 0 0 0 0 0 Ribosome 0 0.438718862354057 0 0 hPsi_site_1949 iPseU_CNN:0;iRNA_PseU:0 1950 chr20 5902998 5902998 1 + G A COAD 5902998 - 5902978 5903018 41 ATTTTCAGTTGTCTCTTTGTCTTTGACGTCTTTTCTACCTA ATTTTCAGTTGTCTCTTTGTTTTTGACGTCTTTTCTACCTA Direct Gain 0 0.967978060069605 0 0.304447650909424 prediction 0.93595612013921 Functional Gain - CHGB ENSG00000089199 CDS Human protein_coding chr20:5902998 chr20:5902998 nonsynonymous SNV 0.945 2 21 hPsi_associated_SNPs_102990 0 0 0 0 0 exosome 0 0.43874132675968 0 0 hPsi_site_1950 iPseU_CNN:0;iRNA_PseU:0 1951 chr5 131607859 131607859 1 + G A STAD 131607859 - 131607839 131607879 41 TCGTAGCCCTCGGGCGGCTTCACGCGCGCCTTGGCGTGGCT TCGTAGCCCTCGGGCGGCTTTACGCGCGCCTTGGCGTGGCT Direct Gain 0 0.967962247926692 0 0.391572326421738 prediction 0.935924495853385 Functional Gain - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607859 chr5:131607859 synonymous SNV . 0 21 hPsi_associated_SNPs_102991 0 0 0 0 0 chromatin 0 0.438714068556837 0 0 hPsi_site_1951 iPseU_CNN:0;iRNA_PseU:0 1952 chr1 109643014 109643014 1 + G A ESCA 109643014 - 109642994 109643034 41 CGGCCCGGCGGGGCTGGGGTCACGATCCGATCAAATAAGAT CGGCCCGGCGGGGCTGGGGTTACGATCCGATCAAATAAGAT Direct Gain 0 0.967958756000346 0 0.99918258190155 prediction 0.935917512000692 Functional Gain - SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643014 chr1:109643014 . . 0 21 hPsi_associated_SNPs_102992 0 0 0 0 0 unknown 0 0.438718621263518 0.9983651638031 0 hPsi_site_1952 iPseU_CNN:0.9983651638031;iRNA_PseU:0 1953 chr19 53994390 53994390 1 + G A SKCM 53994390 - 53994370 53994410 41 GAAAGCTTTGTCACATTCTTCACATTTGTAAGGTTTCTCTC GAAAGCTTTGTCACATTCTTTACATTTGTAAGGTTTCTCTC Direct Gain 0 0.96793581454355 0 0.999986529350281 prediction 0.9358716290871 Functional Gain - ZNF813 ENSG00000198346 CDS Human protein_coding chr19:53994390 chr19:53994390 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_102993 0 0 0 0 0 nucleolus 0 0.437992977918522 0.999973058700562 0 hPsi_site_1953 iPseU_CNN:0.999973058700562;iRNA_PseU:0 1954 chr11 122720807 122720807 1 + C A rs200267378 122720807 - 122720787 122720827 41 GTCTGGCCTTCCTCCACGGTGATGGTTTCTGTGTGGTTAGT GTCTGGCCTTCCTCCACGGTTATGGTTTCTGTGTGGTTAGT Direct Gain 0 0.967934646544214 0 0.998656094074249 prediction 0.935869293088428 Functional Gain - CRTAM ENSG00000109943 CDS Human protein_coding chr11:122720807 chr11:122720807 synonymous SNV . 0 21 hPsi_associated_SNPs_102994 0 0 0 0 0 exosome 0 0.43871858361418 0.997312188148498 0 hPsi_site_1954 iPseU_CNN:0.997312188148498;iRNA_PseU:0 1955 chrX 49845280 49845280 1 + C T LUSC 49845280 + 49845260 49845300 41 GCCTACATAGTCAATTATTTCATGTACGTCCTCTGGGCTCT GCCTACATAGTCAATTATTTTATGTACGTCCTCTGGGCTCT Direct Gain 0 0.967933727886167 0 0.966567635536194 prediction 0.935867455772335 Functional Gain - CLCN5 ENSG00000171365 CDS Human protein_coding chrX:49845280 chrX:49845280 synonymous SNV . 0 21 hPsi_associated_SNPs_102995 0 0 1 0 2 Nucleus 0 0.438720179256253 0.933135271072388 0 hPsi_site_1955 iPseU_CNN:0.933135271072388;iRNA_PseU:0 1956 chr8 55372554 55372554 1 + G A LUSC 55372554 - 55372534 55372574 41 GGGGCGGATCAGGGACCTGTCACACGTCAGGATAGTTGCAG GGGGCGGATCAGGGACCTGTTACACGTCAGGATAGTTGCAG Direct Gain 0 0.967926285495224 0 0.999832689762115 prediction 0.935852570990448 Functional Gain - SOX17 ENSG00000164736 CDS Human protein_coding chr8:55372554 chr8:55372554 synonymous SNV . 0 21 hPsi_associated_SNPs_102996 0 0 0 0 0 Cytosol 0 0.438716192798882 0.99966537952423 0 hPsi_site_1956 iPseU_CNN:0.99966537952423;iRNA_PseU:0 1957 chr12 93163941 93163941 1 + C T LUAD 93163941 + 93163921 93163961 41 ACCAAGAAAATATCTTTATTCACATTGCCCGCAGAATCCTC ACCAAGAAAATATCTTTATTTACATTGCCCGCAGAATCCTC Direct Gain 0 0.967925631766266 0 0.99306732416153 prediction 0.935851263532531 Functional Gain - PLEKHG7 ENSG00000187510 CDS Human protein_coding chr12:93163941 chr12:93163941 synonymous SNV . 0 21 hPsi_associated_SNPs_102997 0 0 0 0 1 exosome 0 0.438718593444716 0.98613464832306 0 hPsi_site_1957 iPseU_CNN:0.98613464832306;iRNA_PseU:0 1958 chr1 248367191 248367191 1 + G T LIHC 248367191 + 248367171 248367211 41 CCAACACAGGACAAGATGGTGTCTGTATTCTACACCATCCT CCAACACAGGACAAGATGGTTTCTGTATTCTACACCATCCT Direct Gain 0 0.967914931405348 0 0.437235951423645 prediction 0.935829862810697 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248367191 chr1:248367191 synonymous SNV . 0 21 hPsi_associated_SNPs_102998 0 0 0 0 0 exosome 0 0.439706476080389 0 0 hPsi_site_1958 iPseU_CNN:0;iRNA_PseU:0 1959 chr8 110441634 110441634 1 + C T COAD 110441634 + 110441614 110441654 41 ACAAGGATAAAGGAAGGTGGCTTATTCAGACAACATGTACT ACAAGGATAAAGGAAGGTGGTTTATTCAGACAACATGTACT Direct Gain 0 0.967914420317201 0 0.0675108432769775 prediction 0.935828840634402 Functional Gain - PKHD1L1 ENSG00000205038 CDS Human protein_coding chr8:110441634 chr8:110441634 synonymous SNV . 0 21 hPsi_associated_SNPs_102999 0 0 0 0 2 exosome 0 0.43868409453143 0 0 hPsi_site_1959 iPseU_CNN:0;iRNA_PseU:0 1960 chr19 33666314 33666314 1 + G A UCEC 33666314 - 33666294 33666334 41 GAAGATGGAGAAAGGCCTGTCACATCTTTCGCACTGACATG GAAGATGGAGAAAGGCCTGTTACATCTTTCGCACTGACATG Direct Gain 0 0.967913931940301 0 0.996871650218964 prediction 0.935827863880602 Functional Gain - WDR88 ENSG00000166359 CDS Human protein_coding chr19:33666314 chr19:33666314 nonsynonymous SNV 0.085 0 21 hPsi_associated_SNPs_103000 0 0 0 0 0 exosome 0 0.438710252717415 0.993743300437928 0 hPsi_site_1960 iPseU_CNN:0.993743300437928;iRNA_PseU:0 1961 chr19 50207991 50207991 1 + G A ESCA 50207991 - 50207971 50208011 41 ATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGTCAC ATTTCGGGAGCGCAGGTACATAAATTCCTCCCACCAGTCAC Direct Gain 0 0.967905269427001 0 0.977779984474182 prediction 0.935810538854001 Functional Gain - CPT1C ENSG00000169169 CDS Human protein_coding chr19:50207991 chr19:50207991 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103001 0 0 0 0 0 exosome 0 0.438718606268837 0.955559968948364 0 hPsi_site_1961 iPseU_CNN:0.955559968948364;iRNA_PseU:0 1962 chr19 19329828 19329828 1 + C T SKCM 19329828 + 19329808 19329848 41 AGCTGGTGGCCCTGCCCTGTCTCTTTACCCTGCAGCCACGG AGCTGGTGGCCCTGCCCTGTTTCTTTACCCTGCAGCCACGG Direct Gain 0 0.967901694390473 0 0.999948263168335 prediction 0.935803388780947 Functional Gain - NCAN ENSG00000130287 CDS Human protein_coding chr19:19329828 chr19:19329828 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_103002 0 0 0 0 0 exosome 0 0.438718591708901 0.99989652633667 0 hPsi_site_1962 iPseU_CNN:0.99989652633667;iRNA_PseU:0 1963 chr9 79634684 79634684 1 + C T ESCA 79634684 + 79634664 79634704 41 AAGATGCTGCCGCTGAGCGACATCTACAAGTTCATCATGGA AAGATGCTGCCGCTGAGCGATATCTACAAGTTCATCATGGA Direct Gain 0 0.967884078673506 0 0.999346494674683 prediction 0.935768157347012 Functional Gain - FOXB2 ENSG00000204612 CDS Human protein_coding chr9:79634684 chr9:79634684 synonymous SNV . 0 21 hPsi_associated_SNPs_103003 0 0 0 0 0 unknown 0 0.438630123345133 0.998692989349366 0 hPsi_site_1963 iPseU_CNN:0.998692989349366;iRNA_PseU:0 1964 chr7 21723542 21723542 1 + G T LUAD 21723542 + 21723522 21723562 41 GGAAACAGCCCTCGACTAGTGATCACTCCTCTAACTGACAG GGAAACAGCCCTCGACTAGTTATCACTCCTCTAACTGACAG Direct Gain 0 0.967877468972542 0 0.999815940856934 prediction 0.935754937945085 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21723542 chr7:21723542 synonymous SNV . 0 21 hPsi_associated_SNPs_103004 0 0 0 0 1 nucleolus 0 0.438718593246153 0.999631881713868 0 hPsi_site_1964 iPseU_CNN:0.999631881713868;iRNA_PseU:0 1965 chr3 183905953 183905953 1 + G A COAD 183905953 - 183905933 183905973 41 CGGCGGCCCCATGCCAGGTTCACATCCGCTCCAGCCAGCAG CGGCGGCCCCATGCCAGGTTTACATCCGCTCCAGCCAGCAG Direct Gain 0 0.967872959239886 0 0.998897671699524 prediction 0.935745918479772 Functional Gain - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183905953 chr3:183905953 synonymous SNV . 0 21 hPsi_associated_SNPs_103005 0 0 0 0 0 Cytosol 0 0.438718593555015 0.997795343399048 0 hPsi_site_1965 iPseU_CNN:0.997795343399048;iRNA_PseU:0 1966 chr4 170628216 170628216 1 + C T BLCA 170628216 + 170628196 170628236 41 ATGCAAAAGAAGAATTCACTCATACCACCCTGGCTGCTGAC ATGCAAAAGAAGAATTCACTTATACCACCCTGGCTGCTGAC Direct Gain 0 0.967871286520765 0 0.9974445104599 prediction 0.935742573041531 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170628216 chr4:170628216 nonsynonymous SNV 0.970 2 21 hPsi_associated_SNPs_103006 0 0 1 0 0 Ribosome 0 0.438554671479974 0.9948890209198 0 hPsi_site_1966 iPseU_CNN:0.9948890209198;iRNA_PseU:0 1967 chr18 19780827 19780827 1 + C T rs115585611 19780827 + 19780807 19780847 41 GGGAGGGCTCCGCCGCGGGCCTCACTCCACTCGTGTCTGCT GGGAGGGCTCCGCCGCGGGCTTCACTCCACTCGTGTCTGCT Direct Gain 0 0.967864500876641 0 0.999260187149048 prediction 0.935729001753283 Functional Gain - GATA6 ENSG00000266283 ncRNA_exonic Human antisense chr18:19780827 chr18:19780827 . . 0 21 hPsi_associated_SNPs_103007 0 0 1 0 0 Cytosol 0 0.438713373265057 0.998520374298096 0 hPsi_site_1967 iPseU_CNN:0.998520374298096;iRNA_PseU:0 1968 chr3 51864598 51864598 1 + G T LUSC 51864598 + 51864578 51864618 41 CGTCAGCGGCGGCAGGCCCTGTTGAGGGTCTACGTCATCCA CGTCAGCGGCGGCAGGCCCTTTTGAGGGTCTACGTCATCCA Direct Gain 0 0.967859741646757 0 0.999748587608337 prediction 0.935719483293514 Functional Gain - IQCF3 ENSG00000229972 CDS Human protein_coding chr3:51864598 chr3:51864598 nonsynonymous SNV 0.021 0 21 hPsi_associated_SNPs_103008 0 0 0 0 0 unknown 0 0.438725271846364 0.999497175216674 0 hPsi_site_1968 iPseU_CNN:0.999497175216674;iRNA_PseU:0 1969 chr1 205492340 205492340 1 + G T SARC 205492340 + 205492320 205492360 41 TTTAAGCGCCGTTTCTCCCTGTCAGTGCCCCGCACTGAGAC TTTAAGCGCCGTTTCTCCCTTTCAGTGCCCCGCACTGAGAC Direct Gain 0 0.967853250953674 0 0.990404903888702 prediction 0.935706501907348 Functional Gain - CDK18 ENSG00000117266 CDS Human protein_coding chr1:205492340 chr1:205492340 synonymous SNV . 0 21 hPsi_associated_SNPs_103009 0 0 1 0 1 nucleus 0 0.438718592996621 0.980809807777404 0 hPsi_site_1969 iPseU_CNN:0.980809807777404;iRNA_PseU:0 1970 chr5 90087002 90087002 1 + A T BLCA 90087002 + 90086982 90087022 41 TTATTAGATCCATCCAAATTAACATAACCCGGCTTGCTGGA TTATTAGATCCATCCAAATTTACATAACCCGGCTTGCTGGA Direct Gain 0 0.967850005252146 0 0.999472379684448 prediction 0.935700010504293 Functional Gain - ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90087002 chr5:90087002 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_103010 0 0 1 0 0 Nucleus 0 0.438494195286791 0.998944759368896 0 hPsi_site_1970 iPseU_CNN:0.998944759368896;iRNA_PseU:0 1971 chr3 17131341 17131341 1 + C A UCEC 17131341 - 17131321 17131361 41 AAGCTCCGGCGTGGCTTCTGGACATCAGCATTTTCGGTGCC AAGCTCCGGCGTGGCTTCTGTACATCAGCATTTTCGGTGCC Direct Gain 0 0.967846121825241 0 0.999988913536072 prediction 0.935692243650483 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17131341 chr3:17131341 synonymous SNV . 0 21 hPsi_associated_SNPs_103011 0 0 0 0 0 nucleus 0 0.434151665111909 0.999977827072144 0 hPsi_site_1971 iPseU_CNN:0.999977827072144;iRNA_PseU:0 1972 chr19 30935725 30935725 1 + C A ESCA 30935725 - 30935705 30935745 41 GGTTGGCGTGGGCCTCCTGGGACATGCCGCCCATGGGCACA GGTTGGCGTGGGCCTCCTGGTACATGCCGCCCATGGGCACA Direct Gain 0 0.967836841398754 0 0.999999165534973 prediction 0.935673682797509 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935725 chr19:30935725 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103012 0 0 0 0 0 exosome 0 0.438718593422472 0.999998331069946 0 hPsi_site_1972 iPseU_CNN:0.999998331069946;iRNA_PseU:0 1973 chr19 56466553 56466553 1 + G A SKCM 56466553 - 56466533 56466573 41 GGCGAAACTCAAGACTTGGTCTCCCTCCTCTGTGTGTCCAA GGCGAAACTCAAGACTTGGTTTCCCTCCTCTGTGTGTCCAA Direct Gain 0 0.967826124912906 0 0.990373730659485 prediction 0.935652249825812 Functional Gain - NLRP8 ENSG00000179709 CDS Human protein_coding chr19:56466553 chr19:56466553 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103013 0 0 0 0 0 unknown 0 0.438702488531434 0.98074746131897 0 hPsi_site_1973 iPseU_CNN:0.98074746131897;iRNA_PseU:0 1974 chr22 36122598 36122598 1 + G A LGG 36122598 - 36122578 36122618 41 ATGAGACTGCCTCCTGCTGTCACAGGTGCTAGGGCCAAACC ATGAGACTGCCTCCTGCTGTTACAGGTGCTAGGGCCAAACC Direct Gain 0 0.967824485492267 0 0.998879730701447 prediction 0.935648970984535 Functional Gain - APOL5 ENSG00000128313 CDS Human protein_coding chr22:36122598 chr22:36122598 synonymous SNV . 0 21 hPsi_associated_SNPs_103014 0 0 0 0 0 unknown 0 0.438721883597954 0.997759461402894 0 hPsi_site_1974 iPseU_CNN:0.997759461402894;iRNA_PseU:0 1975 chr1 109732234 109732234 1 + C T BLCA 109732234 + 109732214 109732254 41 GCTGGGAGGTGGCTGGTGATCACATTTACACAGCTGCTGGA GCTGGGAGGTGGCTGGTGATTACATTTACACAGCTGCTGGA Direct Gain 0 0.967810665760559 0 0.999965310096741 prediction 0.935621331521118 Functional Gain - KIAA1324 ENSG00000116299 CDS Human protein_coding chr1:109732234 chr1:109732234 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_103015 0 0 0 0 2 exosome 0 0.438749256925426 0.999930620193482 0 hPsi_site_1975 iPseU_CNN:0.999930620193482;iRNA_PseU:0 1976 chr2 202941711 202941711 1 + G A rs546006047 202941711 - 202941691 202941731 41 GAAGGGAGAAATACTGTGGTCTTCCTCTTCTTCTCCCTCTC GAAGGGAGAAATACTGTGGTTTTCCTCTTCTTCTCCCTCTC Direct Gain 0 0.967795589771193 0 0.398468434810638 prediction 0.935591179542386 Functional Gain - KIAA2012 ENSG00000182329 CDS Human protein_coding chr2:202941711 chr2:202941711 synonymous SNV . 0 21 hPsi_associated_SNPs_103016 0 0 0 0 0 exosome 0 0.438719252701313 0 0 hPsi_site_1976 iPseU_CNN:0;iRNA_PseU:0 1977 chr11 57982687 57982687 1 + C T LUSC 57982687 + 57982667 57982707 41 CCCAGGTTCGGCATTTTGCTCACAGTCATCTCATGGTTCCT CCCAGGTTCGGCATTTTGCTTACAGTCATCTCATGGTTCCT Direct Gain 0 0.96779223483274 0 0.999348163604736 prediction 0.93558446966548 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57982687 chr11:57982687 synonymous SNV . 0 21 hPsi_associated_SNPs_103017 0 0 0 0 0 unknown 0 0.438584021827561 0.998696327209472 0 hPsi_site_1977 iPseU_CNN:0.998696327209472;iRNA_PseU:0 1978 chr9 91617003 91617003 1 + C T STAD 91617003 + 91616983 91617023 41 AACTCCGCCATGAACCCGGTCATCTACACGCTGGCCAGCAA AACTCCGCCATGAACCCGGTTATCTACACGCTGGCCAGCAA Direct Gain 0 0.967789906611012 0 0.936872124671936 prediction 0.935579813222023 Functional Gain - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91617003 chr9:91617003 synonymous SNV . 0 21 hPsi_associated_SNPs_103018 0 0 0 0 0 cytosol 0 0.43871247582671 0.873744249343872 0 hPsi_site_1978 iPseU_CNN:0.873744249343872;iRNA_PseU:0 1979 chr4 183652077 183652077 1 + G A STAD 183652077 - 183652057 183652097 41 AGTGAGGAATGGGGATCGTTCAAATACCAAAGTTAGAGAGG AGTGAGGAATGGGGATCGTTTAAATACCAAAGTTAGAGAGG Direct Gain 0 0.967788982862769 0 0.999992847442627 prediction 0.935577965725539 Functional Gain - TENM3 ENSG00000218336 CDS Human protein_coding chr4:183652077 chr4:183652077 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103019 0 0 0 0 0 nucleus 0 0.438718636677204 0.999985694885254 0 hPsi_site_1979 iPseU_CNN:0.999985694885254;iRNA_PseU:0 1980 chr8 43173759 43173759 1 + A T rs566865824 43173759 + 43173739 43173779 41 TAACACAGAGATTGAAGAGTATCACAGGTAAGCCTATGGCA TAACACAGAGATTGAAGAGTTTCACAGGTAAGCCTATGGCA Direct Gain 0 0.967787655552307 0 0.831492304801941 prediction 0.935575311104615 Functional Gain - POTEA ENSG00000188877 ncRNA_exonic Human polymorphic_pseudogene chr8:43173759 chr8:43173759 . . 0 21 hPsi_associated_SNPs_103020 0 0 0 0 1 unknown 0 0.426102342601597 0.662984609603882 0 hPsi_site_1980 iPseU_CNN:0.662984609603882;iRNA_PseU:0 1981 chr1 228285332 228285332 1 + G A rs147354087 228285332 - 228285312 228285352 41 AGCTCCTCACGGGCCTCGTTCACACGCTCTCTGTCATTGCT AGCTCCTCACGGGCCTCGTTTACACGCTCTCTGTCATTGCT Direct Gain 0 0.967777343320957 0 0.99983274936676 prediction 0.935554686641915 Functional Gain - ARF1 ENSG00000143761 CDS Human protein_coding chr1:228285332 chr1:228285332 synonymous SNV . 0 21 hPsi_associated_SNPs_103021 0 0 0 0 0 Cytosol 0 0.4387045162513 0.99966549873352 0 hPsi_site_1981 iPseU_CNN:0.99966549873352;iRNA_PseU:0 1982 chr12 20890175 20890175 1 + G T SARC 20890175 + 20890155 20890195 41 ATCAGCTTGTCTTGCTGGTTGTCAAACCTCCAACAGGAGTG ATCAGCTTGTCTTGCTGGTTTTCAAACCTCCAACAGGAGTG Direct Gain 0 0.967767803824969 0 0.965837836265564 prediction 0.935535607649939 Functional Gain - SLCO1C1 ENSG00000139155 CDS Human protein_coding chr12:20890175 chr12:20890175 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103022 0 0 0 0 1 nucleus 0 0.438720707194251 0.931675672531128 0 hPsi_site_1982 iPseU_CNN:0.931675672531128;iRNA_PseU:0 1983 chr2 155714172 155714172 1 + C A rs373802340 155714172 - 155714152 155714192 41 TCGATCTCCTGACCTCAGGTGATCCCCCAACCTCCGCCTCC TCGATCTCCTGACCTCAGGTTATCCCCCAACCTCCGCCTCC Direct Gain 0 0.967746639219245 0 0.357379794120789 prediction 0.93549327843849 Functional Gain - KCNJ3 ENSG00000162989 UTR3 Human protein_coding chr2:155714172 chr2:155714172 . . 0 21 hPsi_associated_SNPs_103023 0 0 0 0 0 exosome 0 0.438712463517369 0 0 hPsi_site_1983 iPseU_CNN:0;iRNA_PseU:0 1984 chr20 33300798 33300798 1 + G A rs541272073 33300798 - 33300778 33300818 41 GGCTGGGGAGCAGGCATACTCTAAAACAGCACCAAACTGCA GGCTGGGGAGCAGGCATACTTTAAAACAGCACCAAACTGCA Direct Gain 0 0.967741348110826 0 0.192495554685593 prediction 0.935482696221652 Functional Gain - TP53INP2 ENSG00000078804 UTR3 Human protein_coding chr20:33300798 chr20:33300798 . . 0 21 hPsi_associated_SNPs_103024 0 0 0 0 0 nucleolus 0 0.438718584305154 0 0 hPsi_site_1984 iPseU_CNN:0;iRNA_PseU:0 1985 chr17 9792969 9792969 1 + G T COAD 9792969 + 9792949 9792989 41 TGTCCGAGTGCAGTGAGGGGGATGTCACCATGGCCAACACC TGTCCGAGTGCAGTGAGGGGTATGTCACCATGGCCAACACC Direct Gain 0 0.967725635134607 0 0.999769806861877 prediction 0.935451270269214 Functional Gain - GLP2R ENSG00000065325 CDS Human protein_coding chr17:9792969 chr17:9792969 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_103025 0 0 0 0 0 nucleus 0 0.437863081848562 0.999539613723754 0 hPsi_site_1985 iPseU_CNN:0.999539613723754;iRNA_PseU:0 1986 chr11 44636848 44636848 1 + G A rs2303864 44636848 - 44636828 44636868 41 TAGTCTCGAATGAGCTCAGTCACGATGCCGCCCATCTCCTG TAGTCTCGAATGAGCTCAGTTACGATGCCGCCCATCTCCTG Direct Gain 0 0.967725571787625 0 0.999657988548279 prediction 0.93545114357525 Functional Gain - CD82 ENSG00000085117 CDS Human protein_coding chr11:44636848 chr11:44636848 synonymous SNV . 0 21 hPsi_associated_SNPs_103026 0 0 0 0 0 Nucleus 0 0.438717332484003 0.999315977096558 0 hPsi_site_1986 iPseU_CNN:0.999315977096558;iRNA_PseU:0 1987 chr21 45545915 45545915 1 + G A BRCA 45545915 - 45545895 45545935 41 GCCAGGTTGCCAAACTCTGTCATTTTTCTTCGGTTCAAAAA GCCAGGTTGCCAAACTCTGTTATTTTTCTTCGGTTCAAAAA Direct Gain 0 0.967722499896775 0 0.890827059745789 prediction 0.93544499979355 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45545915 chr21:45545915 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103027 0 0 0 0 0 Nucleus 0 0.438132828323496 0.781654119491578 0 hPsi_site_1987 iPseU_CNN:0.781654119491578;iRNA_PseU:0 1988 chr7 158734813 158734813 1 + C A rs34634437 158734813 - 158734793 158734833 41 GGGGAGACCTGCTGTTTGGCGACAGGACCCAGATCGCTCTG GGGGAGACCTGCTGTTTGGCTACAGGACCCAGATCGCTCTG Direct Gain 0 0.967710247465808 0 0.999924540519714 prediction 0.935420494931616 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158734813 chr7:158734813 synonymous SNV . 0 21 hPsi_associated_SNPs_103028 0 0 0 0 0 Nucleus 0 0.438718636944973 0.999849081039428 0 hPsi_site_1988 iPseU_CNN:0.999849081039428;iRNA_PseU:0 1989 chr4 48384633 48384633 1 + C T LUSC 48384633 + 48384613 48384653 41 GTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGAC GTCTCGGCGCAGTTCTGGTTTATCTTGCAATTCTACAAGAC Direct Gain 0 0.967681308638904 0 0.998709440231323 prediction 0.935362617277809 Functional Gain - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384633 chr4:48384633 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_103029 0 0 1 0 1 Cytosol 0 0.438711643107693 0.997418880462646 0 hPsi_site_1989 iPseU_CNN:0.997418880462646;iRNA_PseU:0 1990 chrX 118717171 118717171 1 + G A UCEC 118717171 - 118717151 118717191 41 TATTGCAGAAACACGCTTTTCATATTCCCGTTTGTTCTCCT TATTGCAGAAACACGCTTTTTATATTCCCGTTTGTTCTCCT Direct Gain 0 0.967662711978954 0 0.944298982620239 prediction 0.935325423957908 Functional Gain - UBE2A ENSG00000077721 CDS Human protein_coding chrX:118717171 chrX:118717171 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103030 0 0 0 0 0 Ribosome 0 0.438717635546924 0.888597965240478 0 hPsi_site_1990 iPseU_CNN:0.888597965240478;iRNA_PseU:0 1991 chr14 24567839 24567839 1 + G A BLCA 24567839 - 24567819 24567859 41 GTGCAGACACTTGACAAAGTCACCATCTCCCAGGGCCTGAA GTGCAGACACTTGACAAAGTTACCATCTCCCAGGGCCTGAA Direct Gain 0 0.967661084840869 0 0.999937534332275 prediction 0.935322169681739 Functional Gain - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567839 chr14:24567839 nonsynonymous SNV 0.993 0 21 hPsi_associated_SNPs_103031 0 0 0 0 0 Endoplasmic reticulum 0 0.438739643750727 0.99987506866455 0 hPsi_site_1991 iPseU_CNN:0.99987506866455;iRNA_PseU:0 1992 chr1 158056511 158056511 1 + G A KICH 158056511 - 158056491 158056531 41 ACATCCAGCTCGATGGAAGTCTCCTTGCCACTAGGGATGGC ACATCCAGCTCGATGGAAGTTTCCTTGCCACTAGGGATGGC Direct Gain 0 0.967660916960725 0 0.999916076660156 prediction 0.935321833921451 Functional Gain - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158056511 chr1:158056511 synonymous SNV . 0 21 hPsi_associated_SNPs_103032 0 0 0 0 0 cytosol 0 0.438747616761276 0.999832153320312 0 hPsi_site_1992 iPseU_CNN:0.999832153320312;iRNA_PseU:0 1993 chr11 6292315 6292315 1 + C T UCEC 6292315 + 6292295 6292335 41 ACAGCGATGGCTGCTACGTGCAACTTCCACGTTCCCGGCCT ACAGCGATGGCTGCTACGTGTAACTTCCACGTTCCCGGCCT Direct Gain 0 0.967654401756417 0 0.999658823013306 prediction 0.935308803512833 Functional Gain - CCKBR ENSG00000110148 CDS Human protein_coding chr11:6292315 chr11:6292315 stopgain 0.383 1 21 hPsi_associated_SNPs_103033 0 0 0 0 1 unknown 0 0.438718592994916 0.999317646026612 0 hPsi_site_1993 iPseU_CNN:0.999317646026612;iRNA_PseU:0 1994 chr3 184295481 184295481 1 + G A BLCA 184295481 - 184295461 184295501 41 CCGTCCAGCTGCACGGAGTTCATCTGGCTGGTCACTGTGGA CCGTCCAGCTGCACGGAGTTTATCTGGCTGGTCACTGTGGA Direct Gain 0 0.967641526914558 0 0.989668965339661 prediction 0.935283053829117 Functional Gain - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184295481 chr3:184295481 nonsynonymous SNV 0.976 0 21 hPsi_associated_SNPs_103034 0 0 0 0 0 Endoplasmic reticulum 0 0.438718596324201 0.979337930679322 0 hPsi_site_1994 iPseU_CNN:0.979337930679322;iRNA_PseU:0 1995 chr10 89623695 89623695 1 + C T rs564308116 89623695 + 89623675 89623715 41 AGGCGCGGCGGCGGCGGCGGCACCTCCCGCTCCTGGAGCGG AGGCGCGGCGGCGGCGGCGGTACCTCCCGCTCCTGGAGCGG Direct Gain 0 0.967639884121372 0 0.999941349029541 prediction 0.935279768242744 Functional Gain - PTEN ENSG00000171862 UTR5 Human protein_coding chr10:89623695 chr10:89623695 . . 0 21 hPsi_associated_SNPs_103035 0 0 1 0 0 Ribosome 0 0.438702213145406 0.999882698059082 0 hPsi_site_1995 iPseU_CNN:0.999882698059082;iRNA_PseU:0 1996 chr22 50988137 50988137 1 + G T UCEC 50988137 + 50988117 50988157 41 GTGATGCGCTACAACACAGTGACCGGCTCCTGGAGCAGGGC GTGATGCGCTACAACACAGTTACCGGCTCCTGGAGCAGGGC Direct Gain 0 0.967633518462987 0 0.951079130172729 prediction 0.935267036925974 Functional Gain - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50988137 chr22:50988137 synonymous SNV . 0 21 hPsi_associated_SNPs_103036 0 0 0 0 0 nucleolus 0 0.438720933676022 0.902158260345458 0 hPsi_site_1996 iPseU_CNN:0.902158260345458;iRNA_PseU:0 1997 chr1 64603062 64603062 1 + G A rs571667839 64603062 - 64603042 64603082 41 CTGACAGAATCCATCTTCTTCATACTCATCTCTGAAAGAAA CTGACAGAATCCATCTTCTTTATACTCATCTCTGAAAGAAA Direct Gain 0 0.967620890216308 0 0.99977970123291 prediction 0.935241780432616 Functional Gain - ROR1 ENSG00000185483 CDS Human protein_coding chr1:64603062 chr1:64603062 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_103037 0 0 0 0 0 Nucleus 0 0.438686418496926 0.99955940246582 0 hPsi_site_1997 iPseU_CNN:0.99955940246582;iRNA_PseU:0 1998 chr18 42532188 42532188 1 + C A LIHC 42532188 - 42532168 42532208 41 CTGAACACTTGGAACTTGGTGATTAGCTCCTCCAGGTCTGC CTGAACACTTGGAACTTGGTTATTAGCTCCTCCAGGTCTGC Direct Gain 0 0.967609358883486 0 0.999655842781067 prediction 0.935218717766971 Functional Gain - SETBP1 ENSG00000152217 CDS Human protein_coding chr18:42532188 chr18:42532188 synonymous SNV . 0 21 hPsi_associated_SNPs_103038 0 0 0 0 0 nucleus 0 0.438718610721482 0.999311685562134 0 hPsi_site_1998 iPseU_CNN:0.999311685562134;iRNA_PseU:0 1999 chr4 87691259 87691259 1 + C T KIRP 87691259 + 87691239 87691279 41 TCATGGTACCCCCAGGAAGTCATATCTGCTCTCAGGGGAAC TCATGGTACCCCCAGGAAGTTATATCTGCTCTCAGGGGAAC Direct Gain 0 0.967602636970889 0 0.996808528900146 prediction 0.935205273941778 Functional Gain - PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87691259 chr4:87691259 synonymous SNV . 0 21 hPsi_associated_SNPs_103039 0 0 1 0 2 Ribosome 0 0.438718425634175 0.993617057800292 0 hPsi_site_1999 iPseU_CNN:0.993617057800292;iRNA_PseU:0 2000 chr2 108969836 108969836 1 + G A rs11684248 108969836 - 108969816 108969856 41 CAGGGGTCAGTATCTCTTGGCAGATTCCTCCCCTAGAAGCA CAGGGGTCAGTATCTCTTGGTAGATTCCTCCCCTAGAAGCA Direct Gain 0 0.967590740609072 0 0.99232006072998 prediction 0.935181481218144 Functional Gain - SULT1C2P1 ENSG00000237223 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:108969836 chr2:108969836 . . 0 21 hPsi_associated_SNPs_103040 0 0 0 0 0 unknown 0 0.438718592981073 0.98464012145996 0 hPsi_site_2000 iPseU_CNN:0.98464012145996;iRNA_PseU:0 2001 chr14 103804755 103804755 1 + G T UCEC 103804755 + 103804735 103804775 41 GGCTCCGTATCCAGCAGTGAGACACCACCACCACCACCACC GGCTCCGTATCCAGCAGTGATACACCACCACCACCACCACC Direct Gain 0 0.967589223444288 0 0.91352903842926 prediction 0.935178446888576 Functional Gain - EIF5 ENSG00000100664 CDS Human protein_coding chr14:103804755 chr14:103804755 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103041 0 0 1 0 2 Cytosol 0 0.438736945726355 0.82705807685852 0 hPsi_site_2001 iPseU_CNN:0.82705807685852;iRNA_PseU:0 2002 chr15 32917784 32917784 1 + A T LGG 32917784 + 32917764 32917804 41 GGAAGGCTTTGAAGAAGGTGAATATGAAACTCCTGGTGAAT GGAAGGCTTTGAAGAAGGTGTATATGAAACTCCTGGTGAAT Direct Gain 0 0.967584817746288 0 0.999710083007812 prediction 0.935169635492576 Functional Gain - ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32917784 chr15:32917784 nonsynonymous SNV 0.964 1 21 hPsi_associated_SNPs_103042 0 0 1 0 2 Ribosome 0 0.438718593577329 0.999420166015624 0 hPsi_site_2002 iPseU_CNN:0.999420166015624;iRNA_PseU:0 2003 chr6 150092335 150092335 1 + G T LIHC 150092335 + 150092315 150092355 41 ACAGATAAAGTATTTGAAGTGATGCTGGCTACAGACCGCTC ACAGATAAAGTATTTGAAGTTATGCTGGCTACAGACCGCTC Direct Gain 0 0.967574878923127 0 0.977801918983459 prediction 0.935149757846254 Functional Gain - PCMT1 ENSG00000120265 CDS Human protein_coding chr6:150092335 chr6:150092335 synonymous SNV . 0 21 hPsi_associated_SNPs_103043 0 0 1 0 2 Ribosome 0 0.438725401786577 0.955603837966918 0 hPsi_site_2003 iPseU_CNN:0.955603837966918;iRNA_PseU:0 2004 chr19 55703084 55703084 1 + G A BLCA 55703084 - 55703064 55703104 41 ATTGCCGGAGCCTTTGTGGGCATCCTCCTGTTTCTCATCCT ATTGCCGGAGCCTTTGTGGGTATCCTCCTGTTTCTCATCCT Direct Gain 0 0.967573036512313 0 0.999324262142181 prediction 0.935146073024626 Functional Gain - PTPRH ENSG00000080031 CDS Human protein_coding chr19:55703084 chr19:55703084 synonymous SNV . 0 21 hPsi_associated_SNPs_103044 0 0 0 0 2 chromatin 0 0.438718592776264 0.998648524284362 0 hPsi_site_2004 iPseU_CNN:0.998648524284362;iRNA_PseU:0 2005 chrX 105142675 105142675 1 + G A LUAD 105142675 - 105142655 105142695 41 GGAGCGTCTTGGGTCCTCATCACAGTCAATCACCTCAGGTG GGAGCGTCTTGGGTCCTCATTACAGTCAATCACCTCAGGTG Direct Gain 0 0.967569015895331 0 0.997618913650513 prediction 0.935138031790663 Functional Gain - NRK ENSG00000123572 CDS Human protein_coding chrX:105142675 chrX:105142675 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103045 0 0 0 0 0 exosome 0 0.438712092156125 0.995237827301026 0 hPsi_site_2005 iPseU_CNN:0.995237827301026;iRNA_PseU:0 2006 chr11 119053938 119053938 1 + G A rs77327236 119053938 - 119053918 119053958 41 ATCACTGACCAGTATTCTGACACCGCCGTCCCCTCTGTCAG ATCACTGACCAGTATTCTGATACCGCCGTCCCCTCTGTCAG Direct Gain 0 0.967561792914107 0 0.996913433074951 prediction 0.935123585828214 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119053938 chr11:119053938 synonymous SNV . 0 21 hPsi_associated_SNPs_103046 0 0 0 0 0 exosome 0 0.438718584402311 0.993826866149902 0 hPsi_site_2006 iPseU_CNN:0.993826866149902;iRNA_PseU:0 2007 chr22 43932048 43932048 1 + C A rs527862421 43932048 - 43932028 43932068 41 AATTCTTTGATTTTGAGAGTGATAAACCTTCACTGTGTTAC AATTCTTTGATTTTGAGAGTTATAAACCTTCACTGTGTTAC Direct Gain 0 0.967538995424754 0 0.0141479671001434 prediction 0.935077990849508 Functional Gain - EFCAB6-AS1 ENSG00000223843 ncRNA_exonic Human antisense chr22:43932048 chr22:43932048 . . 0 21 hPsi_associated_SNPs_103047 0 0 0 0 0 unknown 0 0.438726724629792 0 0 hPsi_site_2007 iPseU_CNN:0;iRNA_PseU:0 2008 chr16 27370259 27370259 1 + C T SKCM 27370259 + 27370239 27370279 41 TTAAGAAAGAATGGTGGGATCAGATTCCCAACCCAGCCCGC TTAAGAAAGAATGGTGGGATTAGATTCCCAACCCAGCCCGC Direct Gain 0 0.967531270050821 0 0.999529361724854 prediction 0.935062540101641 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27370259 chr16:27370259 stopgain 0.998 0 21 hPsi_associated_SNPs_103048 0 0 1 0 2 Endoplasmic reticulum 0 0.438718592907539 0.999058723449708 0 hPsi_site_2008 iPseU_CNN:0.999058723449708;iRNA_PseU:0 2009 chr22 23077328 23077328 1 + G T GBM 23077328 + 23077308 23077348 41 GTGTCCGGGTCTCCTGGACAGTCAGTCACCATCTCCTGCAC GTGTCCGGGTCTCCTGGACATTCAGTCACCATCTCCTGCAC Direct Gain 0 0.967501486847064 0 0.877974629402161 prediction 0.935002973694129 Functional Gain - GGTLC2;MIR650 ENSG00000211664 CDS Human IG_V_gene chr22:23077328 chr22:23077328 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103049 0 0 0 0 0 unknown 0 0.438756194080982 0.755949258804322 0 hPsi_site_2009 iPseU_CNN:0.755949258804322;iRNA_PseU:0 2010 chr1 181620515 181620515 1 + C T SKCM 181620515 + 181620495 181620535 41 ACCTGGAATTGGCTGTACTTCATCCCCCTCATCATCATTGG ACCTGGAATTGGCTGTACTTTATCCCCCTCATCATCATTGG Direct Gain 0 0.967485124551632 0 0.999872446060181 prediction 0.934970249103265 Functional Gain - CACNA1E ENSG00000198216 CDS Human protein_coding chr1:181620515 chr1:181620515 synonymous SNV . 0 21 hPsi_associated_SNPs_103050 0 0 0 0 2 exosome 0 0.43871858892054 0.999744892120362 0 hPsi_site_2010 iPseU_CNN:0.999744892120362;iRNA_PseU:0 2011 chr12 46298770 46298770 1 + A T UCEC 46298770 + 46298750 46298790 41 GCTAGCCATTAGTAACATGGAAGCTTCCTCCACCCTTGCCA GCTAGCCATTAGTAACATGGTAGCTTCCTCCACCCTTGCCA Direct Gain 0 0.967483184009816 0 0.996494889259338 prediction 0.934966368019631 Functional Gain - ARID2 ENSG00000189079 CDS Human protein_coding chr12:46298770 chr12:46298770 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103051 0 0 1 2 1 Nucleus 0 0.438739453253007 0.992989778518676 0 hPsi_site_2011 iPseU_CNN:0.992989778518676;iRNA_PseU:0 2012 chr8 123965814 123965814 1 + G A BRCA 123965814 - 123965794 123965834 41 TGGTACTGCTCCATCCACTTCACGGTTCCCGTTTTCAGCAA TGGTACTGCTCCATCCACTTTACGGTTCCCGTTTTCAGCAA Direct Gain 0 0.967448588420751 0 0.577117443084717 prediction 0.934897176841502 Functional Gain - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965814 chr8:123965814 synonymous SNV . 0 21 hPsi_associated_SNPs_103052 0 0 0 0 0 Nucleus 0 0.438718598326396 0.154234886169434 0 hPsi_site_2012 iPseU_CNN:0.154234886169434;iRNA_PseU:0 2013 chr3 9959008 9959008 1 + G A UCEC 9959008 - 9958988 9959028 41 AAGGACAGCAAGAACCAGGGCACAGGCATCTTCTAGGTGCC AAGGACAGCAAGAACCAGGGTACAGGCATCTTCTAGGTGCC Direct Gain 0 0.967426122667555 0 0.999863028526306 prediction 0.93485224533511 Functional Gain - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9959008 chr3:9959008 synonymous SNV . 0 21 hPsi_associated_SNPs_103053 0 0 0 0 0 Ribosome 0 0.438718592969489 0.999726057052612 0 hPsi_site_2013 iPseU_CNN:0.999726057052612;iRNA_PseU:0 2014 chr20 19998682 19998682 1 + C T STAD 19998682 + 19998662 19998702 41 GCAGCAGATGCTGTCTCAGTCATGGTTAGTGTTTGCAAGTT GCAGCAGATGCTGTCTCAGTTATGGTTAGTGTTTGCAAGTT Direct Gain 0 0.967421571550055 0 0.807177305221558 prediction 0.93484314310011 Functional Gain - NAA20 ENSG00000173418 CDS Human protein_coding chr20:19998682 chr20:19998682 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_103054 0 0 1 0 1 Ribosome 0 0.464326669475199 0.614354610443116 0 hPsi_site_2014 iPseU_CNN:0.614354610443116;iRNA_PseU:0 2015 chr17 76212803 76212803 1 + G A BLCA 76212803 - 76212783 76212823 41 TTCACCAAGGGTTAATTCTTCAAACTGCTTCTTGACAGAAA TTCACCAAGGGTTAATTCTTTAAACTGCTTCTTGACAGAAA Direct Gain 0 0.967406475380119 0 0.954093396663666 prediction 0.934812950760238 Functional Gain - BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212803 chr17:76212803 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103055 0 0 0 0 0 Ribosome 0 0.438718594393655 0.908186793327332 0 hPsi_site_2015 iPseU_CNN:0.908186793327332;iRNA_PseU:0 2016 chr3 52245381 52245381 1 + C T BLCA 52245381 + 52245361 52245401 41 CGGTCCTATGCTGCTGGCTTCATCTTCACCACCTCTCTGCC CGGTCCTATGCTGCTGGCTTTATCTTCACCACCTCTCTGCC Direct Gain 0 0.967406240317819 0 0.969361782073975 prediction 0.934812480635637 Functional Gain - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245381 chr3:52245381 synonymous SNV . 0 21 hPsi_associated_SNPs_103056 0 0 1 0 1 Cytosol 0 0.44620717188354 0.93872356414795 0 hPsi_site_2016 iPseU_CNN:0.93872356414795;iRNA_PseU:0 2017 chr11 94883737 94883737 1 + G A rs550370747 94883737 - 94883717 94883757 41 CCAAGCGGAGAATCTCTCTCCACCTCCGCCCTCCCGGGACT CCAAGCGGAGAATCTCTCTCTACCTCCGCCCTCCCGGGACT Direct Gain 0 0.967403589305626 0 0.345778048038483 prediction 0.934807178611252 Functional Gain - LOC101929295 ENSG00000245552 ncRNA_exonic Human antisense chr11:94883737 chr11:94883737 . . 0 21 hPsi_associated_SNPs_103057 0 0 0 0 0 unknown 0 0.438720678983665 0 0 hPsi_site_2017 iPseU_CNN:0;iRNA_PseU:0 2018 chr7 149430775 149430775 1 + C T PRAD 149430775 + 149430755 149430795 41 CAGAGGGACCGCTCGCCGGGCACGTCCGCTGCCTCCAGACG CAGAGGGACCGCTCGCCGGGTACGTCCGCTGCCTCCAGACG Direct Gain 0 0.967398253811487 0 0.999998211860657 prediction 0.934796507622974 Functional Gain - KRBA1 ENSG00000133619 CDS Human protein_coding chr7:149430775 chr7:149430775 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_103058 0 0 0 0 0 Cytosol 0 0.43860803072355 0.999996423721314 0 hPsi_site_2018 iPseU_CNN:0.999996423721314;iRNA_PseU:0 2019 chr5 140209566 140209566 1 + G T LUAD 140209566 + 140209546 140209586 41 GTGGGGCTGTACACGGGCGAGATCAGCACCACTCGTGTCCT GTGGGGCTGTACACGGGCGATATCAGCACCACTCGTGTCCT Direct Gain 0 0.967390759158943 0 0.988842010498047 prediction 0.934781518317885 Functional Gain - PCDHA6 ENSG00000081842 CDS Human protein_coding chr5:140209566 chr5:140209566 nonsynonymous SNV 0.946 3 21 hPsi_associated_SNPs_103059 0 0 0 0 0 nucleus 0 0.439078633806696 0.977684020996094 0 hPsi_site_2019 iPseU_CNN:0.977684020996094;iRNA_PseU:0 2020 chr20 398484 398484 1 + G T LUSC 398484 + 398464 398504 41 ATGGGGTGCGGCAGAATGGGGACAGTGCCTACCTCTATCTG ATGGGGTGCGGCAGAATGGGTACAGTGCCTACCTCTATCTG Direct Gain 0 0.96737482365074 0 0.999990165233612 prediction 0.93474964730148 Functional Gain - RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398484 chr20:398484 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_103060 0 0 0 8 1 Ribosome 0 0.438718539081003 0.999980330467224 0 hPsi_site_2020 iPseU_CNN:0.999980330467224;iRNA_PseU:0 2021 chr5 149227083 149227083 1 + G A BLCA 149227083 - 149227063 149227103 41 GGCCTCTTTCAGTAAGCTGTCAAAATCCATGGCTTCATACT GGCCTCTTTCAGTAAGCTGTTAAAATCCATGGCTTCATACT Direct Gain 0 0.967347103371218 0 0.999020218849182 prediction 0.934694206742435 Functional Gain - PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149227083 chr5:149227083 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103061 0 0 0 0 0 chromatin 0 0.437021334350656 0.998040437698364 0 hPsi_site_2021 iPseU_CNN:0.998040437698364;iRNA_PseU:0 2022 chr1 164818705 164818705 1 + G A rs553017437 164818705 - 164818685 164818725 41 GGAAGCTGTGTTTCCAGAGGCATGCTCTTTCCAAACCCATC GGAAGCTGTGTTTCCAGAGGTATGCTCTTTCCAAACCCATC Direct Gain 0 0.967346307328307 0 0.998267889022827 prediction 0.934692614656615 Functional Gain - PBX1 ENSG00000185630 UTR3 Human protein_coding chr1:164818705 chr1:164818705 . . 0 21 hPsi_associated_SNPs_103062 0 0 0 0 0 Ribosome 0 0.438718458632968 0.996535778045654 0 hPsi_site_2022 iPseU_CNN:0.996535778045654;iRNA_PseU:0 2023 chr22 37707063 37707063 1 + C T SKCM 37707063 + 37707043 37707083 41 ACGTGGAAACGGCGCTGGTTCATCCTGACCGACAACTGCCT ACGTGGAAACGGCGCTGGTTTATCCTGACCGACAACTGCCT Direct Gain 0 0.967345786110398 0 0.829641819000244 prediction 0.934691572220797 Functional Gain - CYTH4 ENSG00000100055 CDS Human protein_coding chr22:37707063 chr22:37707063 synonymous SNV . 0 21 hPsi_associated_SNPs_103063 0 0 0 0 2 exosome 0 0.432809774861185 0.659283638000488 0 hPsi_site_2023 iPseU_CNN:0.659283638000488;iRNA_PseU:0 2024 chr11 44080117 44080117 1 + G A GBM 44080117 - 44080097 44080137 41 ATAGAGGAGCCGTTCTTCTTCAAATGTACAGGGATCCAGGT ATAGAGGAGCCGTTCTTCTTTAAATGTACAGGGATCCAGGT Direct Gain 0 0.96734226561261 0 0.348979771137238 prediction 0.934684531225221 Functional Gain - ACCSL ENSG00000205126 CDS Human protein_coding chr11:44080117 chr11:44080117 nonsynonymous SNV 0.825 0 21 hPsi_associated_SNPs_103064 0 0 0 0 0 Exosome 0 0.438707187368313 0 0 hPsi_site_2024 iPseU_CNN:0;iRNA_PseU:0 2025 chr19 59094804 59094804 1 + C T rs549153659 59094804 + 59094784 59094824 41 AGGAAAGGGTGGCATTTGGACACAAGGCCCTAGATCCCACG AGGAAAGGGTGGCATTTGGATACAAGGCCCTAGATCCCACG Direct Gain 0 0.967331802527968 0 0.999998927116394 prediction 0.934663605055936 Functional Gain - CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59094804 chr19:59094804 . . 0 21 hPsi_associated_SNPs_103065 0 0 1 0 0 unknown 0 0.438718592994629 0.999997854232788 0 hPsi_site_2025 iPseU_CNN:0.999997854232788;iRNA_PseU:0 2026 chr12 1250888 1250888 1 + G T UCEC 1250888 + 1250868 1250908 41 AGAAGGGGACACAAGCTGGAGAGATACATGACCTCAAGGAC AGAAGGGGACACAAGCTGGATAGATACATGACCTCAAGGAC Direct Gain 0 0.96730277693532 0 0.30024066567421 prediction 0.93460555387064 Functional Gain - ERC1 ENSG00000082805 CDS Human protein_coding chr12:1250888 chr12:1250888 stopgain 1.000 1 21 hPsi_associated_SNPs_103066 0 0 1 0 1 chromatin 0 0.438717380020742 0 0 hPsi_site_2026 iPseU_CNN:0;iRNA_PseU:0 2027 chr3 178941917 178941917 1 + G T SKCM 178941917 + 178941897 178941937 41 TGAGGCGACCAGATTTCATGGATGCTCTACAGGGCTTTCTG TGAGGCGACCAGATTTCATGTATGCTCTACAGGGCTTTCTG Direct Gain 0 0.967302439612267 0 0.999052405357361 prediction 0.934604879224535 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178941917 chr3:178941917 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_103067 0 0 0 0 2 Ribosome 0 0.438714650599396 0.998104810714722 0 hPsi_site_2027 iPseU_CNN:0.998104810714722;iRNA_PseU:0 2028 chr10 121196222 121196222 1 + G A HNSC 121196222 - 121196202 121196242 41 AACTTCAGGTCACCCCCATTCATGATGGTCAGGACCAAGCA AACTTCAGGTCACCCCCATTTATGATGGTCAGGACCAAGCA Direct Gain 0 0.967300401234263 0 0.999952614307404 prediction 0.934600802468526 Functional Gain - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121196222 chr10:121196222 nonsynonymous SNV 0.957 4 21 hPsi_associated_SNPs_103068 0 0 0 0 0 Cytosol 0 0.438719108127383 0.999905228614808 0 hPsi_site_2028 iPseU_CNN:0.999905228614808;iRNA_PseU:0 2029 chr17 27371948 27371948 1 + C T rs184988456 27371948 + 27371928 27371968 41 CGAAAGGCGTACCTGGAAGACTTTTACACCCGGATGATGCA CGAAAGGCGTACCTGGAAGATTTTTACACCCGGATGATGCA Direct Gain 0 0.967300324955474 0 0.999597787857056 prediction 0.934600649910949 Functional Gain - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27371948 chr17:27371948 synonymous SNV . 0 21 hPsi_associated_SNPs_103069 0 0 0 0 2 cytosol 0 0.438701711037514 0.999195575714112 0 hPsi_site_2029 iPseU_CNN:0.999195575714112;iRNA_PseU:0 2030 chr16 28948976 28948976 1 + G T LUAD 28948976 + 28948956 28948996 41 GAGAACGAGGATGAAGAGCTGACCCAGCCGGTCGCCAGGAC GAGAACGAGGATGAAGAGCTTACCCAGCCGGTCGCCAGGAC Direct Gain 0 0.967299158728623 0 0.999563097953796 prediction 0.934598317457246 Functional Gain - CD19 ENSG00000177455 CDS Human protein_coding chr16:28948976 chr16:28948976 synonymous SNV 0.996 0 21 hPsi_associated_SNPs_103070 0 0 0 0 2 exosome 0 0.438707347932762 0.999126195907592 0 hPsi_site_2030 iPseU_CNN:0.999126195907592;iRNA_PseU:0 2031 chr9 35382468 35382468 1 + C A STAD 35382468 - 35382448 35382488 41 GCAAAGCGATCAGATGCAGAGACATTGGTAGAGGCAGTTGT GCAAAGCGATCAGATGCAGATACATTGGTAGAGGCAGTTGT Direct Gain 0 0.967298636389191 0 0.999926567077637 prediction 0.934597272778383 Functional Gain - UNC13B ENSG00000198722 CDS Human protein_coding chr9:35382468 chr9:35382468 synonymous SNV . 0 21 hPsi_associated_SNPs_103071 0 0 0 0 0 Cytosol 0 0.379591161922055 0.999853134155274 0 hPsi_site_2031 iPseU_CNN:0.999853134155274;iRNA_PseU:0 2032 chr20 57466805 57466805 1 + G A SKCM 57466805 - 57466785 57466825 41 TCGTTGCGCTGGTCCTCGGTCTTACTGTTCCCGAGGCAGCC TCGTTGCGCTGGTCCTCGGTTTTACTGTTCCCGAGGCAGCC Direct Gain 0 0.967291311601096 0 0.882233798503876 prediction 0.934582623202193 Functional Gain - GNAS ENSG00000087460 CDS Human protein_coding chr20:57466805 chr20:57466805 synonymous SNV . 0 21 hPsi_associated_SNPs_103072 0 0 0 0 0 Cytosol 0 0.438725460308667 0.764467597007752 0 hPsi_site_2032 iPseU_CNN:0.764467597007752;iRNA_PseU:0 2033 chr3 190345207 190345207 1 + G A LGG 190345207 - 190345187 190345227 41 GGTGACATCAATAGTGATGTCATCAGGTTTTTTTCCATCAA GGTGACATCAATAGTGATGTTATCAGGTTTTTTTCCATCAA Direct Gain 0 0.967269414888461 0 0.961880922317505 prediction 0.934538829776921 Functional Gain - IL1RAP ENSG00000196083 CDS Human protein_coding chr3:190345207 chr3:190345207 nonsynonymous SNV 0.443 1 21 hPsi_associated_SNPs_103073 0 0 0 0 0 Endoplasmic reticulum 0 0.438582630596142 0.92376184463501 0 hPsi_site_2033 iPseU_CNN:0.92376184463501;iRNA_PseU:0 2034 chr10 104486751 104486751 1 + G T LUSC 104486751 + 104486731 104486771 41 CCTTGGGTGGCAGGATGGGGGTTGTGCCCCCAGGCACCCAA CCTTGGGTGGCAGGATGGGGTTTGTGCCCCCAGGCACCCAA Direct Gain 0 0.967269210849704 0 0.978685736656189 prediction 0.934538421699407 Functional Gain - SFXN2 ENSG00000156398 CDS Human protein_coding chr10:104486751 chr10:104486751 nonsynonymous SNV 0.506 1 21 hPsi_associated_SNPs_103074 0 0 1 0 1 Ribosome 0 0.438718592995008 0.957371473312378 0 hPsi_site_2034 iPseU_CNN:0.957371473312378;iRNA_PseU:0 2035 chrX 48661088 48661088 1 + G A STAD 48661088 - 48661068 48661108 41 TGAGGTCATAGTTGAGGAGGCTTGGCCCCTGCCGCGGTTCT TGAGGTCATAGTTGAGGAGGTTTGGCCCCTGCCGCGGTTCT Direct Gain 0 0.967244680497444 0 0.601994276046753 prediction 0.934489360994887 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48661088 chrX:48661088 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103075 0 0 0 0 0 Cytosol 0 0.438718592995102 0.203988552093506 0 hPsi_site_2035 iPseU_CNN:0.203988552093506;iRNA_PseU:0 2036 chr2 204001463 204001463 1 + G T UCEC 204001463 + 204001443 204001483 41 GTAAACCAGGAATATCCAGTGAACTACTTCGACCATCAGAT GTAAACCAGGAATATCCAGTTAACTACTTCGACCATCAGAT Direct Gain 0 0.967234862831127 0 0.997529268264771 prediction 0.934469725662255 Functional Gain - NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204001463 chr2:204001463 stopgain 0.997 0 21 hPsi_associated_SNPs_103076 0 0 0 0 1 chromatin 0 0.438719548880383 0.995058536529542 0 hPsi_site_2036 iPseU_CNN:0.995058536529542;iRNA_PseU:0 2037 chr4 661735 661735 1 + G A LUAD 661735 - 661715 661755 41 CAGAGCCTTCACTTTGGCCTCATACTCATCAGCCAGCGCCT CAGAGCCTTCACTTTGGCCTTATACTCATCAGCCAGCGCCT Direct Gain 0 0.967231934440247 0 0.999681234359741 prediction 0.934463868880495 Functional Gain - PDE6B ENSG00000133256 CDS Human protein_coding chr4:661735 chr4:661735 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_103077 0 0 0 0 0 Nucleus 0 0.435357911666782 0.999362468719482 0 hPsi_site_2037 iPseU_CNN:0.999362468719482;iRNA_PseU:0 2038 chr21 47541491 47541491 1 + G T LUSC 47541491 + 47541471 47541511 41 GATCTCGGGGAGACCCCGGTGATGCAGGACCCCGTGGAGAC GATCTCGGGGAGACCCCGGTTATGCAGGACCCCGTGGAGAC Direct Gain 0 0.967229006560569 0 0.999925196170807 prediction 0.934458013121138 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47541491 chr21:47541491 nonsynonymous SNV 0.978 3 21 hPsi_associated_SNPs_103078 0 0 0 0 2 Cytosol 0 0.438439745276826 0.999850392341614 0 hPsi_site_2038 iPseU_CNN:0.999850392341614;iRNA_PseU:0 2039 chr2 168102324 168102324 1 + C A COAD 168102324 - 168102304 168102344 41 TCTTCCTGAGTGACTGTCTTGATATTTTCATATTCTAACCC TCTTCCTGAGTGACTGTCTTTATATTTTCATATTCTAACCC Direct Gain 0 0.967219538482552 0 5.34653663635254e-05 prediction 0.934439076965104 Functional Gain - XIRP2 ENSG00000163092 CDS Human protein_coding chr2:168102324 chr2:168102324 synonymous SNV . 0 21 hPsi_associated_SNPs_103079 0 0 0 0 0 exosome 0 0.438718591759132 0 0 hPsi_site_2039 iPseU_CNN:0;iRNA_PseU:0 2040 chrX 7177764 7177764 1 + G A SKCM 7177764 - 7177744 7177784 41 TAGCCTCTGGGTGAGATTGTCATAGGACATGGGCTGCTGAA TAGCCTCTGGGTGAGATTGTTATAGGACATGGGCTGCTGAA Direct Gain 0 0.967207247415919 0 0.970190107822418 prediction 0.934414494831838 Functional Gain - STS ENSG00000101846 CDS Human protein_coding chrX:7177764 chrX:7177764 nonsynonymous SNV 0.430 2 21 hPsi_associated_SNPs_103080 0 0 0 0 0 Cytosol 0 0.438718843454581 0.940380215644836 0 hPsi_site_2040 iPseU_CNN:0.940380215644836;iRNA_PseU:0 2041 chr14 24543544 24543544 1 + C T rs532254277 24543544 + 24543524 24543564 41 ACAAACGACTATGTGCAACTCACCTTCAGAGCCTACAAGCT ACAAACGACTATGTGCAACTTACCTTCAGAGCCTACAAGCT Direct Gain 0 0.967203960676505 0 0.99893045425415 prediction 0.93440792135301 Functional Gain - CPNE6 ENSG00000100884 CDS Human protein_coding chr14:24543544 chr14:24543544 synonymous SNV . 0 21 hPsi_associated_SNPs_103081 0 0 0 0 2 exosome 0 0.438718688526244 0.9978609085083 0 hPsi_site_2041 iPseU_CNN:0.9978609085083;iRNA_PseU:0 2042 chr1 248617058 248617058 1 + G A SKCM 248617058 - 248617038 248617078 41 CCCTGCTAGCCCTTCCTGATCACAGTCGCCACCCTGATGCT CCCTGCTAGCCCTTCCTGATTACAGTCGCCACCCTGATGCT Direct Gain 0 0.967196502320899 0 0.786983132362366 prediction 0.934393004641798 Functional Gain - OR2T2 ENSG00000196240 CDS Human protein_coding chr1:248617058 chr1:248617058 synonymous SNV . 0 21 hPsi_associated_SNPs_103082 0 0 0 0 0 exosome 0 0.438718592996661 0.573966264724732 0 hPsi_site_2042 iPseU_CNN:0.573966264724732;iRNA_PseU:0 2043 chr1 248637578 248637578 1 + G A LUSC 248637578 - 248637558 248637598 41 TGGTTCATTCTTGACTGCATCATGCTCCTCAGAGCCCTGGT TGGTTCATTCTTGACTGCATTATGCTCCTCAGAGCCCTGGT Direct Gain 0 0.967189456787568 0 0.530285835266113 prediction 0.934378913575136 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248637578 chr1:248637578 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_103083 0 0 0 0 0 unknown 0 0.439174547578886 0.0605716705322259 0 hPsi_site_2043 iPseU_CNN:0.0605716705322259;iRNA_PseU:0 2044 chr14 70418873 70418873 1 + G A SKCM 70418873 - 70418853 70418893 41 GTGGAGGTTGCACTGTGGGTCACGGTCACTTATTAGAAACT GTGGAGGTTGCACTGTGGGTTACGGTCACTTATTAGAAACT Direct Gain 0 0.967172536414353 0 0.999999582767487 prediction 0.934345072828706 Functional Gain - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70418873 chr14:70418873 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103084 0 0 0 0 0 cytosol 0 0.438593240940057 0.999999165534974 0 hPsi_site_2044 iPseU_CNN:0.999999165534974;iRNA_PseU:0 2045 chr12 1936702 1936702 1 + C T rs556699553 1936702 + 1936682 1936722 41 AGCAGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTGCA AGCAGCAGGCCATCCAGCGGTTCACACCCTACGCGGCTGCA Direct Gain 0 0.967169837333194 0 0.999587118625641 prediction 0.934339674666389 Functional Gain - LRTM2 ENSG00000166159 UTR5 Human protein_coding chr12:1936702 chr12:1936702 . . 0 21 hPsi_associated_SNPs_103085 0 0 0 0 2 exosome 0 0.438692330770371 0.999174237251282 0 hPsi_site_2045 iPseU_CNN:0.999174237251282;iRNA_PseU:0 2046 chr19 54403905 54403905 1 + C A OV 54403905 - 54403885 54403925 41 AAAGTCAGTGATCTTGATGTGTCCCTCAGCATCCAGCATCA AAAGTCAGTGATCTTGATGTTTCCCTCAGCATCCAGCATCA Direct Gain 0 0.967147597783474 0 0.971699774265289 prediction 0.934295195566949 Functional Gain - PRKCG ENSG00000126583 CDS Human protein_coding chr19:54403905 chr19:54403905 nonsynonymous SNV 0.993 3 21 hPsi_associated_SNPs_103086 0 0 0 0 0 Cytosol 0 0.438782572622666 0.943399548530578 0 hPsi_site_2046 iPseU_CNN:0.943399548530578;iRNA_PseU:0 2047 chr3 45988278 45988278 1 + G A STAD 45988278 - 45988258 45988298 41 AGATGCCCAGTAGGCTCTTGCACATGACCTGGCCAAACACC AGATGCCCAGTAGGCTCTTGTACATGACCTGGCCAAACACC Direct Gain 0 0.967142213612468 0 1 prediction 0.934284427224936 Functional Gain - CXCR6 ENSG00000172215 CDS Human protein_coding chr3:45988278 chr3:45988278 nonsynonymous SNV 0.555 4 21 hPsi_associated_SNPs_103087 0 0 1 0 0 exosome 0 0.438709549309752 1 0 hPsi_site_2047 iPseU_CNN:1;iRNA_PseU:0 2048 chr10 90362355 90362355 1 + C T SKCM 90362355 + 90362335 90362375 41 TCGTTTGGATGTGTATTTTTCACACAACCCAGCAGGAACAT TCGTTTGGATGTGTATTTTTTACACAACCCAGCAGGAACAT Direct Gain 0 0.967131678003351 0 0.99994283914566 prediction 0.934263356006702 Functional Gain - LIPJ ENSG00000204022 CDS Human protein_coding chr10:90362355 chr10:90362355 nonsynonymous SNV 0.289 1 21 hPsi_associated_SNPs_103088 0 0 0 0 1 exosome 0 0.439097372695572 0.99988567829132 0 hPsi_site_2048 iPseU_CNN:0.99988567829132;iRNA_PseU:0 2049 chr7 64168177 64168177 1 + G A LUSC 64168177 - 64168157 64168197 41 AAAGGCTTTTCCACATTCTTCACATTTATAGGGTTTTTCTC AAAGGCTTTTCCACATTCTTTACATTTATAGGGTTTTTCTC Direct Gain 0 0.967122587442272 0 0.963253855705261 prediction 0.934245174884544 Functional Gain - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64168177 chr7:64168177 nonsynonymous SNV 0.294 0 21 hPsi_associated_SNPs_103089 0 0 0 0 0 Nucleus 0 0.438728279379119 0.926507711410522 0 hPsi_site_2049 iPseU_CNN:0.926507711410522;iRNA_PseU:0 2050 chr1 14105173 14105173 1 + G A SKCM 14105173 - 14105153 14105193 41 ATTTGGCATGCTGGCTTCTTCTTCCCCCTCGTCTTCCAACT ATTTGGCATGCTGGCTTCTTTTTCCCCCTCGTCTTCCAACT Direct Gain 0 0.967109306068605 0 0.259404718875885 prediction 0.934218612137211 Functional Gain - PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14105173 chr1:14105173 nonsynonymous SNV 0.882 1 21 hPsi_associated_SNPs_103090 0 0 0 0 0 Cytosol 0 0.438718592995102 0 0 hPsi_site_2050 iPseU_CNN:0;iRNA_PseU:0 2051 chr6 37429388 37429388 1 + C T LGG 37429388 + 37429368 37429408 41 GCAAGCAGCTGCTTCTGTGTCAGTTCCTCATGGCGCTGTCC GCAAGCAGCTGCTTCTGTGTTAGTTCCTCATGGCGCTGTCC Direct Gain 0 0.9671033768864 0 0.993731260299683 prediction 0.934206753772799 Functional Gain - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37429388 chr6:37429388 stopgain 1.000 1 21 hPsi_associated_SNPs_103091 0 0 0 0 1 Endoplasmic reticulum 0 0.438718590778894 0.987462520599366 0 hPsi_site_2051 iPseU_CNN:0.987462520599366;iRNA_PseU:0 2052 chr3 36422206 36422206 1 + A T LUAD 36422206 + 36422186 36422226 41 GGAGGCGGTGGGCGCCGAGCAACCGCCCTCTCCTGCATCCA GGAGGCGGTGGGCGCCGAGCTACCGCCCTCTCCTGCATCCA Direct Gain 0 0.967101025719149 0 0.996769905090332 prediction 0.934202051438297 Functional Gain - STAC ENSG00000144681 CDS Human protein_coding chr3:36422206 chr3:36422206 nonsynonymous SNV 0.859 2 21 hPsi_associated_SNPs_103092 0 0 0 0 1 exosome 0 0.438522331615123 0.993539810180664 0 hPsi_site_2052 iPseU_CNN:0.993539810180664;iRNA_PseU:0 2053 chr1 41187302 41187302 1 + G A rs79740867 41187302 - 41187282 41187322 41 GCTGGGAGACTGCAATGAGCCATGATTGCACTACTGCACTT GCTGGGAGACTGCAATGAGCTATGATTGCACTACTGCACTT Direct Gain 0 0.967099747864954 0 0.999231934547424 prediction 0.934199495729909 Functional Gain - NFYC ENSG00000066136 UTR5 Human protein_coding chr1:41187302 chr1:41187302 . . 0 21 hPsi_associated_SNPs_103093 0 0 0 0 0 Ribosome 0 0.431540583666153 0.998463869094848 0 hPsi_site_2053 iPseU_CNN:0.998463869094848;iRNA_PseU:0 2054 chr1 154437896 154437896 1 + T A rs2229238 154437896 - 154437876 154437916 41 GCTGAGCCCGTTTGTGTTTTATCATCCACAGGGTCCAGGCT GCTGAGCCCGTTTGTGTTTTTTCATCCACAGGGTCCAGGCT Direct Gain 0 0.967093627901043 0 0.99999338388443 prediction 0.934187255802087 Functional Gain - IL6R ENSG00000160712 UTR3 Human protein_coding chr1:154437896 chr1:154437896 . . 0 21 hPsi_associated_SNPs_103094 0 1 0 0 0 Cytosol 0 0.438715002219943 0.99998676776886 0 hPsi_site_2054 iPseU_CNN:0.99998676776886;iRNA_PseU:0 2055 chr1 248308987 248308987 1 + G T LUSC 248308987 + 248308967 248309007 41 AAATAGCCCACTTCTTCTGTGACTTCCCTTCCCTACTAATC AAATAGCCCACTTCTTCTGTTACTTCCCTTCCCTACTAATC Direct Gain 0 0.967081474382395 0 0.99941474199295 prediction 0.93416294876479 Functional Gain - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248308987 chr1:248308987 nonsynonymous SNV 0.018 3 21 hPsi_associated_SNPs_103095 0 0 0 0 0 unknown 0 0.438716695234834 0.9988294839859 0 hPsi_site_2055 iPseU_CNN:0.9988294839859;iRNA_PseU:0 2056 chr2 43993363 43993363 1 + C A rs74378179 43993363 - 43993343 43993383 41 CTCCAGTGATGTGAAAAGGTGACGGTATACTTTCTAATACC CTCCAGTGATGTGAAAAGGTTACGGTATACTTTCTAATACC Direct Gain 0 0.967077319572489 0 0.99863189458847 prediction 0.934154639144978 Functional Gain - PLEKHH2 ENSG00000152527 UTR3 Human protein_coding chr2:43993363 chr2:43993363 . . 0 21 hPsi_associated_SNPs_103096 0 0 0 0 0 Ribosome 0 0.438718586306695 0.99726378917694 0 hPsi_site_2056 iPseU_CNN:0.99726378917694;iRNA_PseU:0 2057 chr17 73820822 73820822 1 + G A rs117326202 73820822 - 73820802 73820842 41 AGTGGGAGAAGAGGGGATGTCATCTCTGCAGTGGGAAGGGC AGTGGGAGAAGAGGGGATGTTATCTCTGCAGTGGGAAGGGC Direct Gain 0 0.96705756792871 0 0.0205336809158325 prediction 0.934115135857421 Functional Gain - UNK ENSG00000132478 UTR3 Human protein_coding chr17:73820822 chr17:73820822 . . 0 21 hPsi_associated_SNPs_103097 0 0 0 0 0 Cytosol 0 0.438718592486472 0 0 hPsi_site_2057 iPseU_CNN:0;iRNA_PseU:0 2058 chr16 21629218 21629218 1 + C A LUSC 21629218 - 21629198 21629238 41 GTCTCTGAAACTGATCTGGTGAAAACACAAACATTGAGCCT GTCTCTGAAACTGATCTGGTTAAAACACAAACATTGAGCCT Direct Gain 0 0.967049030298674 0 0.98366516828537 prediction 0.934098060597349 Functional Gain - METTL9 ENSG00000197006 CDS Human protein_coding chr16:21629218 chr16:21629218 stopgain 1.000 1 21 hPsi_associated_SNPs_103098 0 0 0 0 0 Cytosol 0 0.438739577986478 0.96733033657074 0 hPsi_site_2058 iPseU_CNN:0.96733033657074;iRNA_PseU:0 2059 chr12 50348009 50348009 1 + C T UCEC 50348009 + 50347989 50348029 41 ACACTGCAGCTGGTGCTCTGCATCTTCGCCTCCACCGATGA ACACTGCAGCTGGTGCTCTGTATCTTCGCCTCCACCGATGA Direct Gain 0 0.967042469889393 0 0.998297810554504 prediction 0.934084939778785 Functional Gain - AQP2 ENSG00000167580 CDS Human protein_coding chr12:50348009 chr12:50348009 synonymous SNV . 0 21 hPsi_associated_SNPs_103099 0 0 0 0 2 Ribosome 0 0.442193109280083 0.996595621109008 0 hPsi_site_2059 iPseU_CNN:0.996595621109008;iRNA_PseU:0 2060 chr7 99798093 99798093 1 + G T UCEC 99798093 + 99798073 99798113 41 CAGTTCTCAGCTGATGCAGAGAAGGTCACTCCCCTGCTCCA CAGTTCTCAGCTGATGCAGATAAGGTCACTCCCCTGCTCCA Direct Gain 0 0.96703773261116 0 0.995106279850006 prediction 0.93407546522232 Functional Gain - STAG3 ENSG00000066923 CDS Human protein_coding chr7:99798093 chr7:99798093 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_103100 0 0 0 0 2 exosome 0 0.438907657786591 0.990212559700012 0 hPsi_site_2060 iPseU_CNN:0.990212559700012;iRNA_PseU:0 2061 chr14 100795978 100795978 1 + C T rs139864899 100795978 + 100795958 100795998 41 GCTCGCCCGGGGTCTGCTCACATAGCCGGTCCCCACGCCCA GCTCGCCCGGGGTCTGCTCATATAGCCGGTCCCCACGCCCA Direct Gain 0 0.967036379509994 0 0.373195767402649 prediction 0.934072759019988 Functional Gain - SLC25A47 ENSG00000140107 CDS Human protein_coding chr14:100795978 chr14:100795978 nonsynonymous SNV 0.044 1 21 hPsi_associated_SNPs_103101 0 0 0 0 0 exosome 0 0.438718562240771 0 0 hPsi_site_2061 iPseU_CNN:0;iRNA_PseU:0 2062 chr21 46057952 46057952 1 + C A rs74701761 46057952 - 46057932 46057972 41 GCAGAGGCACCGCAGGAGGGGACGGGCACGCAGCAGGTGGA GCAGAGGCACCGCAGGAGGGTACGGGCACGCAGCAGGTGGA Direct Gain 0 0.967036121795802 0 0.998947620391846 prediction 0.934072243591604 Functional Gain - KRTAP10-10 ENSG00000221859 CDS Human protein_coding chr21:46057952 chr21:46057952 synonymous SNV . 0 21 hPsi_associated_SNPs_103102 0 0 0 0 0 unknown 0 0.438722908719865 0.997895240783692 0 hPsi_site_2062 iPseU_CNN:0.997895240783692;iRNA_PseU:0 2063 chrX 103294757 103294757 1 + C A CHOL 103294757 - 103294737 103294777 41 GGAAAGGCTGAGGCCCTGGTGAACCTGCTTCAGCACCCGGG GGAAAGGCTGAGGCCCTGGTTAACCTGCTTCAGCACCCGGG Direct Gain 0 0.9670271042458 0 0.999831795692444 prediction 0.9340542084916 Functional Gain - H2BFM ENSG00000101812 CDS Human protein_coding chrX:103294757 chrX:103294757 nonsynonymous SNV 0.018 3 21 hPsi_associated_SNPs_103103 0 0 0 0 0 unknown 0 0.439608116940902 0.999663591384888 0 hPsi_site_2063 iPseU_CNN:0.999663591384888;iRNA_PseU:0 2064 chr1 156052398 156052398 1 + G A rs564170984 156052398 - 156052378 156052418 41 TGCGAGGAAAGACCGAAGGCCACATCCCTATCCTCCTCGGG TGCGAGGAAAGACCGAAGGCTACATCCCTATCCTCCTCGGG Direct Gain 0 0.967014523865228 0 0.999998211860657 prediction 0.934029047730456 Functional Gain - LMNA ENSG00000160789 UTR5 Human protein_coding chr1:156052398 chr1:156052398 . . 0 21 hPsi_associated_SNPs_103104 0 0 0 0 0 Cytosol 0 0.438759957140016 0.999996423721314 0 hPsi_site_2064 iPseU_CNN:0.999996423721314;iRNA_PseU:0 2065 chr12 49373260 49373260 1 + G A SKCM 49373260 - 49373240 49373280 41 TTCGTGGAGGAGGCTACGTTCACAATACCCCTGGTGGGACG TTCGTGGAGGAGGCTACGTTTACAATACCCCTGGTGGGACG Direct Gain 0 0.967003287476596 0 0.999997138977051 prediction 0.934006574953193 Functional Gain - WNT1 ENSG00000125084 CDS Human protein_coding chr12:49373260 chr12:49373260 synonymous SNV . 0 21 hPsi_associated_SNPs_103105 0 0 0 0 0 exosome 0 0.438718596214785 0.999994277954102 0 hPsi_site_2065 iPseU_CNN:0.999994277954102;iRNA_PseU:0 2066 chr4 156643241 156643241 1 + A T COAD 156643241 + 156643221 156643261 41 TTGCTGGCGTCGTTGGAGTTAAAATGCCCCGTTACTGTCTT TTGCTGGCGTCGTTGGAGTTTAAATGCCCCGTTACTGTCTT Direct Gain 0 0.966994745601725 0 0.999987125396729 prediction 0.93398949120345 Functional Gain - GUCY1A3 ENSG00000164116 CDS Human protein_coding chr4:156643241 chr4:156643241 stopgain 0.985 1 21 hPsi_associated_SNPs_103106 0 0 1 0 1 exosome 0 0.438718580209025 0.999974250793458 0 hPsi_site_2066 iPseU_CNN:0.999974250793458;iRNA_PseU:0 2067 chr14 74823852 74823852 1 + C T SKCM 74823852 + 74823832 74823872 41 AGACACTACTACCTCCAGGGCATGATCGACTCCAAAGTGAT AGACACTACTACCTCCAGGGTATGATCGACTCCAAAGTGAT Direct Gain 0 0.96696454229385 0 0.860967516899109 prediction 0.9339290845877 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74823852 chr14:74823852 synonymous SNV . 0 21 hPsi_associated_SNPs_103107 0 0 0 0 0 unknown 0 0.438719306583023 0.721935033798218 0 hPsi_site_2067 iPseU_CNN:0.721935033798218;iRNA_PseU:0 2068 chrX 152994833 152994833 1 + C A rs185931852 152994833 - 152994813 152994853 41 CCAGTGGCAGTGATGATGGGGACAGCCACCATGAGCAGGCC CCAGTGGCAGTGATGATGGGTACAGCCACCATGAGCAGGCC Direct Gain 0 0.966952991397286 0 0.387685269117355 prediction 0.933905982794573 Functional Gain - ABCD1 ENSG00000101986 CDS Human protein_coding chrX:152994833 chrX:152994833 synonymous SNV . 0 21 hPsi_associated_SNPs_103108 0 0 0 0 0 nucleolus 0 0.438719766851209 0 0 hPsi_site_2068 iPseU_CNN:0;iRNA_PseU:0 2069 chr22 24829609 24829609 1 + C T SKCM 24829609 + 24829589 24829629 41 GCCTGCCACGGCTGCCTCTTCATTGCCTGCTTCGTCCTGGT GCCTGCCACGGCTGCCTCTTTATTGCCTGCTTCGTCCTGGT Direct Gain 0 0.966946473609839 0 0.996889710426331 prediction 0.933892947219677 Functional Gain - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24829609 chr22:24829609 synonymous SNV . 0 21 hPsi_associated_SNPs_103109 0 0 0 0 0 Endoplasmic reticulum 0 0.438649721493319 0.993779420852662 0 hPsi_site_2069 iPseU_CNN:0.993779420852662;iRNA_PseU:0 2070 chr15 85461787 85461787 1 + C T rs200365277 85461787 + 85461767 85461807 41 ATTGTCTTTTTCAGCTGTGTCATATCCGTTCTCTACCACGT ATTGTCTTTTTCAGCTGTGTTATATCCGTTCTCTACCACGT Direct Gain 0 0.966927318840624 0 0.993370711803436 prediction 0.933854637681249 Functional Gain - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85461787 chr15:85461787 synonymous SNV . 0 21 hPsi_associated_SNPs_103110 0 0 0 0 2 Endoplasmic reticulum 0 0.438716022241094 0.986741423606872 0 hPsi_site_2070 iPseU_CNN:0.986741423606872;iRNA_PseU:0 2071 chr8 42196169 42196169 1 + G A OV 42196169 - 42196149 42196189 41 GTGATTCCCCCGTTGAGAGTCTCCTGCGGCGCCTTCCGTTT GTGATTCCCCCGTTGAGAGTTTCCTGCGGCGCCTTCCGTTT Direct Gain 0 0.966887723569049 0 0.999040246009827 prediction 0.933775447138098 Functional Gain - POLB ENSG00000070501 CDS Human protein_coding chr8:42196169 chr8:42196169 synonymous SNV . 0 21 hPsi_associated_SNPs_103111 0 0 0 0 0 Cytosol 0 0.438718659285565 0.998080492019654 0 hPsi_site_2071 iPseU_CNN:0.998080492019654;iRNA_PseU:0 2072 chr1 12389930 12389930 1 + G A COAD 12389930 - 12389910 12389950 41 TCCAGAAAGGGTGAAGTGGGCATAGCCTTCAGGGCTAGTTC TCCAGAAAGGGTGAAGTGGGTATAGCCTTCAGGGCTAGTTC Direct Gain 0 0.966886662504546 0 0.998781323432922 prediction 0.933773325009091 Functional Gain - VPS13D ENSG00000048707 CDS Human protein_coding chr1:12389930 chr1:12389930 nonsynonymous SNV 0.978 3 21 hPsi_associated_SNPs_103112 0 0 0 0 0 Nucleus 0 0.438718592461664 0.997562646865844 0 hPsi_site_2072 iPseU_CNN:0.997562646865844;iRNA_PseU:0 2073 chr9 100127970 100127970 1 + C T SKCM 100127970 + 100127950 100127990 41 TGCAGGGATTTTAAGGGGATCATCTTGACCCTCCTCTGGGA TGCAGGGATTTTAAGGGGATTATCTTGACCCTCCTCTGGGA Direct Gain 0 0.966870563109362 0 0.972646951675415 prediction 0.933741126218724 Functional Gain - CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100127970 chr9:100127970 synonymous SNV . 0 21 hPsi_associated_SNPs_103113 0 0 0 0 2 chromatin 0 0.438715069024258 0.94529390335083 0 hPsi_site_2073 iPseU_CNN:0.94529390335083;iRNA_PseU:0 2074 chr5 172513540 172513540 1 + G A UCEC 172513540 - 172513520 172513560 41 AAAGGTGTGGCTTCGAAAGGCATCCCCGAAAGGCGGATCCA AAAGGTGTGGCTTCGAAAGGTATCCCCGAAAGGCGGATCCA Direct Gain 0 0.966863091304709 0 0.99737423658371 prediction 0.933726182609418 Functional Gain - CREBRF ENSG00000164463 CDS Human protein_coding chr5:172513540 chr5:172513540 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103114 0 0 0 0 0 Cytosol 0 0.438718592889061 0.99474847316742 0 hPsi_site_2074 iPseU_CNN:0.99474847316742;iRNA_PseU:0 2075 chr2 210824366 210824366 1 + G A DLBC 210824366 - 210824346 210824386 41 GGCTCCCCAGCCAGATTTTGCAAGATCTTCAGCCGTGGCCC GGCTCCCCAGCCAGATTTTGTAAGATCTTCAGCCGTGGCCC Direct Gain 0 0.966852043118292 0 0.163307249546051 prediction 0.933704086236584 Functional Gain - UNC80 ENSG00000144406 CDS Human protein_coding chr2:210824366 chr2:210824366 synonymous SNV . 0 21 hPsi_associated_SNPs_103115 0 0 0 0 0 exosome 0 0.438718529328177 0 0 hPsi_site_2075 iPseU_CNN:0;iRNA_PseU:0 2076 chr11 125221258 125221258 1 + C A BLCA 125221258 - 125221238 125221278 41 TCCTGGTAGGGTGGGGGCGGGACATTCTGCGTGGCCATCAT TCCTGGTAGGGTGGGGGCGGTACATTCTGCGTGGCCATCAT Direct Gain 0 0.966844975790236 0 0.99993884563446 prediction 0.933689951580473 Functional Gain - PKNOX2 ENSG00000165495 CDS Human protein_coding chr11:125221258 chr11:125221258 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103116 0 0 0 0 0 exosome 0 0.438718601257236 0.99987769126892 0 hPsi_site_2076 iPseU_CNN:0.99987769126892;iRNA_PseU:0 2077 chr19 36430377 36430377 1 + C T SKCM 36430377 + 36430357 36430397 41 GCTGCCGCTGGCCCCTGCCTCATCCCCACCCCAGTCAGCCA GCTGCCGCTGGCCCCTGCCTTATCCCCACCCCAGTCAGCCA Direct Gain 0 0.966840320501613 0 0.999526858329773 prediction 0.933680641003226 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430377 chr19:36430377 nonsynonymous SNV 0.960 0 21 hPsi_associated_SNPs_103117 0 0 1 0 1 nucleus 0 0.43871846058778 0.999053716659546 0 hPsi_site_2077 iPseU_CNN:0.999053716659546;iRNA_PseU:0 2078 chr19 38610087 38610087 1 + C T rs112137003 38610087 + 38610067 38610107 41 AACGCCGCGCACAAGTCCGACAAGTTCCACACCATGGCCAC AACGCCGCGCACAAGTCCGATAAGTTCCACACCATGGCCAC Direct Gain 0 0.966837677378087 0 0.999995708465576 prediction 0.933675354756175 Functional Gain - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38610087 chr19:38610087 synonymous SNV . 0 21 hPsi_associated_SNPs_103118 0 0 1 0 0 Ribosome 0 0.438727170880646 0.999991416931152 0 hPsi_site_2078 iPseU_CNN:0.999991416931152;iRNA_PseU:0 2079 chr11 45893783 45893783 1 + G A rs530143714 45893783 - 45893763 45893803 41 CTAGGCTGCTGTCACTCACTCTCAGGCATCCTTGCTCGGCA CTAGGCTGCTGTCACTCACTTTCAGGCATCCTTGCTCGGCA Direct Gain 0 0.96682124211782 0 0.998324930667877 prediction 0.933642484235641 Functional Gain - CRY2 ENSG00000121671 UTR3 Human protein_coding chr11:45893783 chr11:45893783 . . 0 21 hPsi_associated_SNPs_103119 0 0 0 0 0 Nucleus 0 0.43871401278992 0.996649861335754 0 hPsi_site_2079 iPseU_CNN:0.996649861335754;iRNA_PseU:0 2080 chr18 74624222 74624222 1 + C T SKCM 74624222 + 74624202 74624242 41 AACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTGGACC AACTCGCTTGATTCAGGAGTTATCCCAAGAGGAACTGGACC Direct Gain 0 0.966820138235737 0 0.998485803604126 prediction 0.933640276471474 Functional Gain - ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74624222 chr18:74624222 nonsynonymous SNV 0.733 1 21 hPsi_associated_SNPs_103120 0 0 0 0 2 Cytosol 0 0.438716555884031 0.996971607208252 0 hPsi_site_2080 iPseU_CNN:0.996971607208252;iRNA_PseU:0 2081 chr3 51429824 51429824 1 + G A COAD 51429824 - 51429804 51429844 41 GTTGCGCGTGGCCCGCTGGTCATCCTCGGGCATCAGGTCCT GTTGCGCGTGGCCCGCTGGTTATCCTCGGGCATCAGGTCCT Direct Gain 0 0.966808531009714 0 0.996887683868408 prediction 0.933617062019428 Functional Gain - RBM15B ENSG00000179837 CDS Human other chr3:51429824 chr3:51429824 nonsynonymous SNV 0.990 3 21 hPsi_associated_SNPs_103121 0 0 0 0 0 Cytosol 0 0.43877419290777 0.993775367736816 0 hPsi_site_2081 iPseU_CNN:0.993775367736816;iRNA_PseU:0 2082 chr17 73221520 73221520 1 + C T UCEC 73221520 + 73221500 73221540 41 GAGCGGTACCTCCAGGACAGCACATTCGCCACCAGCCCTCA GAGCGGTACCTCCAGGACAGTACATTCGCCACCAGCCCTCA Direct Gain 0 0.966804702889504 0 0.999994277954102 prediction 0.933609405779009 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73221520 chr17:73221520 synonymous SNV . 0 21 hPsi_associated_SNPs_103122 0 0 1 0 2 Nucleus 0 0.438718593543551 0.999988555908204 0 hPsi_site_2082 iPseU_CNN:0.999988555908204;iRNA_PseU:0 2083 chr5 169469046 169469046 1 + C T BLCA 169469046 + 169469026 169469066 41 GAGCAGTGTGCATCACAGGTCATGCAGACAGGCCAGCAGCA GAGCAGTGTGCATCACAGGTTATGCAGACAGGCCAGCAGCA Direct Gain 0 0.966787311497815 0 0.953923344612122 prediction 0.93357462299563 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169469046 chr5:169469046 synonymous SNV . 0 21 hPsi_associated_SNPs_103123 0 0 0 0 2 Cytosol 0 0.437481694778967 0.907846689224244 0 hPsi_site_2083 iPseU_CNN:0.907846689224244;iRNA_PseU:0 2084 chr17 4836463 4836463 1 + G A DLBC 4836463 - 4836443 4836483 41 AGGAGAAGGGTGTCGAGATTCTCCAGCCCATTCAGGAGCCC AGGAGAAGGGTGTCGAGATTTTCCAGCCCATTCAGGAGCCC Direct Gain 0 0.966770766216899 0 0.655811071395874 prediction 0.933541532433798 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836463 chr17:4836463 synonymous SNV . 0 21 hPsi_associated_SNPs_103124 0 0 1 0 0 exosome 0 0.438718841134557 0.311622142791748 0 hPsi_site_2084 iPseU_CNN:0.311622142791748;iRNA_PseU:0 2085 chr2 203383770 203383770 1 + C A OV 203383770 - 203383750 203383790 41 CTATGAAGAACTTACATTGGGATAGTACTCCATCACAAGCA CTATGAAGAACTTACATTGGTATAGTACTCCATCACAAGCA Direct Gain 0 0.96676764628737 0 0.706159472465515 prediction 0.93353529257474 Functional Gain - BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203383770 chr2:203383770 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103125 0 0 0 0 0 Ribosome 0 0.438718593057295 0.41231894493103 0 hPsi_site_2085 iPseU_CNN:0.41231894493103;iRNA_PseU:0 2086 chr2 185803014 185803014 1 + C A LUSC 185803014 - 185802994 185803034 41 AAAGATAGGATTTAGGCTGTGACTGTCTAAAGTTCCTTTCA AAAGATAGGATTTAGGCTGTTACTGTCTAAAGTTCCTTTCA Direct Gain 0 0.96674103828817 0 0.995954990386963 prediction 0.933482076576341 Functional Gain - ZNF804A ENSG00000170396 CDS Human protein_coding chr2:185803014 chr2:185803014 stopgain 0.115 0 21 hPsi_associated_SNPs_103126 0 0 0 0 0 nucleoplasm 0 0.438718592437115 0.991909980773926 0 hPsi_site_2086 iPseU_CNN:0.991909980773926;iRNA_PseU:0 2087 chr1 248367140 248367140 1 + C T SKCM 248367140 + 248367120 248367160 41 TACTATGGAGCAGCTTTGTTCATGTACATACGGCCCACATC TACTATGGAGCAGCTTTGTTTATGTACATACGGCCCACATC Direct Gain 0 0.966737754125252 0 0.999945759773254 prediction 0.933475508250504 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248367140 chr1:248367140 synonymous SNV . 0 21 hPsi_associated_SNPs_103127 0 0 0 0 0 exosome 0 0.438592927053727 0.999891519546508 0 hPsi_site_2087 iPseU_CNN:0.999891519546508;iRNA_PseU:0 2088 chr7 151805222 151805222 1 + G A COAD 151805222 - 151805202 151805242 41 TGATGATGTCAATCACTGGGCACACCACGGTGTGCCGGTCC TGATGATGTCAATCACTGGGTACACCACGGTGTGCCGGTCC Direct Gain 0 0.966736818464693 0 0.998453497886658 prediction 0.933473636929386 Functional Gain - GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151805222 chr7:151805222 nonsynonymous SNV 0.961 4 21 hPsi_associated_SNPs_103128 0 0 0 0 0 chromatin 0 0.442461245369497 0.996906995773316 0 hPsi_site_2088 iPseU_CNN:0.996906995773316;iRNA_PseU:0 2089 chr1 15382733 15382733 1 + G A LGG 15382733 - 15382713 15382753 41 GGGTGTGAGTGGTAGAGAGTCTGTTGACTCTGCCGGATGGC GGGTGTGAGTGGTAGAGAGTTTGTTGACTCTGCCGGATGGC Direct Gain 0 0.966735317164088 0 0.851837515830994 prediction 0.933470634328176 Functional Gain - KAZN ENSG00000189337 CDS Human protein_coding chr1:15382733 chr1:15382733 synonymous SNV . 0 21 hPsi_associated_SNPs_103129 0 0 0 0 0 chromatin 0 0.438718594627647 0.703675031661988 0 hPsi_site_2089 iPseU_CNN:0.703675031661988;iRNA_PseU:0 2090 chr12 109523652 109523652 1 + G A PAAD 109523652 - 109523632 109523672 41 AGCAGGTAGGCGCTGGAGGACAGGACCTCCTGCAGGCTGGC AGCAGGTAGGCGCTGGAGGATAGGACCTCCTGCAGGCTGGC Direct Gain 0 0.966734022977788 0 0.999605298042297 prediction 0.933468045955575 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109523652 chr12:109523652 synonymous SNV . 0 21 hPsi_associated_SNPs_103130 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592994025 0.999210596084594 0 hPsi_site_2090 iPseU_CNN:0.999210596084594;iRNA_PseU:0 2091 chr20 30458965 30458965 1 + C T rs190534425 30458965 + 30458945 30458985 41 GAAGCTCTGCTGGGACCAGGCACAACTGCCATTAGGTGCCC GAAGCTCTGCTGGGACCAGGTACAACTGCCATTAGGTGCCC Direct Gain 0 0.966731807014987 0 0.999994039535522 prediction 0.933463614029974 Functional Gain - TTLL9 ENSG00000131044 CDS Human protein_coding chr20:30458965 chr20:30458965 synonymous SNV . 0 21 hPsi_associated_SNPs_103131 0 0 0 0 2 exosome 0 0.438716687530781 0.999988079071044 0 hPsi_site_2091 iPseU_CNN:0.999988079071044;iRNA_PseU:0 2092 chr12 122413555 122413555 1 + C T ACC 122413555 + 122413535 122413575 41 CTGTCAGAGCTTCCTTTTGTCATGAGAGCAATTGGCTTTTA CTGTCAGAGCTTCCTTTTGTTATGAGAGCAATTGGCTTTTA Direct Gain 0 0.966724511955911 0 0.969928503036499 prediction 0.933449023911821 Functional Gain - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122413555 chr12:122413555 synonymous SNV . 0 21 hPsi_associated_SNPs_103132 0 0 0 0 1 chromatin 0 0.438687940808927 0.939857006072998 0 hPsi_site_2092 iPseU_CNN:0.939857006072998;iRNA_PseU:0 2093 chr5 176008481 176008481 1 + C T LUSC 176008481 + 176008461 176008501 41 GGGCCCCTGGACAGAGAGGCCATCGACCCCGCCCTGGAGGG GGGCCCCTGGACAGAGAGGCTATCGACCCCGCCCTGGAGGG Direct Gain 0 0.966710541743513 0 0.996854245662689 prediction 0.933421083487025 Functional Gain - CDHR2 ENSG00000074276 CDS Human protein_coding chr5:176008481 chr5:176008481 synonymous SNV . 0 21 hPsi_associated_SNPs_103133 0 0 1 0 0 Exosome 0 0.438718593075337 0.993708491325378 0 hPsi_site_2093 iPseU_CNN:0.993708491325378;iRNA_PseU:0 2094 chr17 7836462 7836462 1 + C T BLCA 7836462 + 7836442 7836482 41 GGATCTCCTGAGTGATTCATCAGAACCCCCTGGGCTCAACC GGATCTCCTGAGTGATTCATTAGAACCCCCTGGGCTCAACC Direct Gain 0 0.966708017363291 0 0.98784351348877 prediction 0.933416034726582 Functional Gain - CNTROB ENSG00000170037 CDS Human protein_coding chr17:7836462 chr17:7836462 nonsynonymous SNV 0.517 3 21 hPsi_associated_SNPs_103134 0 0 1 0 0 Nucleus 0 0.43872458304093 0.97568702697754 0 hPsi_site_2094 iPseU_CNN:0.97568702697754;iRNA_PseU:0 2095 chr3 150874031 150874031 1 + G T LUSC 150874031 + 150874011 150874051 41 ACATGGCCTCCAGCACGGGCGATGGCCCTGTCCCTGTGCCA ACATGGCCTCCAGCACGGGCTATGGCCCTGTCCCTGTGCCA Direct Gain 0 0.966704445871337 0 0.728199183940887 prediction 0.933408891742675 Functional Gain - MED12L ENSG00000144893 CDS Human protein_coding chr3:150874031 chr3:150874031 nonsynonymous SNV 0.291 0 21 hPsi_associated_SNPs_103135 0 0 0 0 1 exosome 0 0.429679615452948 0.456398367881774 0 hPsi_site_2095 iPseU_CNN:0.456398367881774;iRNA_PseU:0 2096 chr6 36981237 36981237 1 + G A rs6909927 36981237 - 36981217 36981257 41 GGGTACGGGGGTGTCATCCTCACATGCGCCCCTCTACTCCT GGGTACGGGGGTGTCATCCTTACATGCGCCCCTCTACTCCT Direct Gain 0 0.966702675828117 0 0.998566865921021 prediction 0.933405351656235 Functional Gain - FGD2 ENSG00000146192 intronic Human protein_coding chr6:36981237 chr6:36981237 . . 0 21 hPsi_associated_SNPs_103136 0 0 0 0 0 Endoplasmic reticulum 0 0.437794656795197 0.997133731842042 0 hPsi_site_2096 iPseU_CNN:0.997133731842042;iRNA_PseU:0 2097 chr14 65054073 65054073 1 + G A TGCT 65054073 - 65054053 65054093 41 TACCTGAACTGAACAAAAGTCATGCGTTTCTTTTCCCCTCC TACCTGAACTGAACAAAAGTTATGCGTTTCTTTTCCCCTCC Direct Gain 0 0.966687751704733 0 0.981072306632996 prediction 0.933375503409465 Functional Gain - PPP1R36 ENSG00000165807 CDS Human protein_coding chr14:65054073 chr14:65054073 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103137 0 0 0 0 0 exosome 0 0.438735667007085 0.962144613265992 0 hPsi_site_2097 iPseU_CNN:0.962144613265992;iRNA_PseU:0 2098 chr11 93779001 93779001 1 + G T SARC 93779001 + 93778981 93779021 41 AGGGCCGAAGTGGGTGATGTGATTGTCATTCATTTAAAGAA AGGGCCGAAGTGGGTGATGTTATTGTCATTCATTTAAAGAA Direct Gain 0 0.966678278954421 0 0.971367120742798 prediction 0.933356557908842 Functional Gain - HEPHL1 ENSG00000181333 CDS Human protein_coding chr11:93779001 chr11:93779001 synonymous SNV . 0 21 hPsi_associated_SNPs_103138 0 0 0 0 1 exosome 0 0.438744086792172 0.942734241485596 0 hPsi_site_2098 iPseU_CNN:0.942734241485596;iRNA_PseU:0 2099 chr6 110300573 110300573 1 + C A CESC 110300573 - 110300553 110300593 41 ACCAGCGCGTTTTCTCCAGCGATCACTGTCCCCGACACGCA ACCAGCGCGTTTTCTCCAGCTATCACTGTCCCCGACACGCA Direct Gain 0 0.966678228071538 0 0.992160558700562 prediction 0.933356456143076 Functional Gain - GPR6 ENSG00000146360 CDS Human protein_coding chr6:110300573 chr6:110300573 synonymous SNV . 0 21 hPsi_associated_SNPs_103139 0 0 0 0 0 unknown 0 0.438113428973299 0.984321117401124 0 hPsi_site_2099 iPseU_CNN:0.984321117401124;iRNA_PseU:0 2100 chr6 116914217 116914217 1 + G A BLCA 116914217 - 116914197 116914237 41 AGCAGGATTATAGTCTGGATCATCTTCATCATCCTCCAGCT AGCAGGATTATAGTCTGGATTATCTTCATCATCCTCCAGCT Direct Gain 0 0.966668270864935 0 0.968103528022766 prediction 0.933336541729871 Functional Gain - RWDD1 ENSG00000111832 CDS Human protein_coding chr6:116914217 chr6:116914217 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_103140 0 0 0 0 0 Ribosome 0 0.43871953125861 0.936207056045532 0 hPsi_site_2100 iPseU_CNN:0.936207056045532;iRNA_PseU:0 2101 chrX 35820637 35820637 1 + G A UCEC 35820637 - 35820617 35820657 41 TGGTCGAGAGCATCTGCGGGCACATTCCTGGGGTCTGATGT TGGTCGAGAGCATCTGCGGGTACATTCCTGGGGTCTGATGT Direct Gain 0 0.966640721910095 0 0.999924778938293 prediction 0.933281443820191 Functional Gain - MAGEB16 ENSG00000189023 CDS Human protein_coding chrX:35820637 chrX:35820637 synonymous SNV . 0 21 hPsi_associated_SNPs_103141 0 0 0 0 0 exosome 0 0.438284798953681 0.999849557876586 0 hPsi_site_2101 iPseU_CNN:0.999849557876586;iRNA_PseU:0 2102 chr19 49469553 49469553 1 + G A CESC 49469553 - 49469533 49469573 41 GTCTGGGGTTTTACCCCACTCATCTTCAGCTGGCTTCTATA GTCTGGGGTTTTACCCCACTTATCTTCAGCTGGCTTCTATA Direct Gain 0 0.966639452711736 0 0.384062558412552 prediction 0.933278905423471 Functional Gain - FTL ENSG00000087086 CDS Human protein_coding chr19:49469553 chr19:49469553 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_103142 0 0 0 0 0 Cytosol 0 0.43871859304694 0 0 hPsi_site_2102 iPseU_CNN:0;iRNA_PseU:0 2103 chr8 19700402 19700402 1 + G A LUSC 19700402 - 19700382 19700422 41 ATTAAATGGAGGCAGTATGGCATGATAGCCTTGCTGGTACA ATTAAATGGAGGCAGTATGGTATGATAGCCTTGCTGGTACA Direct Gain 0 0.966628176414638 0 0.996104717254639 prediction 0.933256352829276 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19700402 chr8:19700402 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103143 0 0 0 0 0 Cytosol 0 0.438717893421911 0.992209434509278 0 hPsi_site_2103 iPseU_CNN:0.992209434509278;iRNA_PseU:0 2104 chr6 114225576 114225576 1 + C T rs59504452 114225576 + 114225556 114225596 41 GCTACCTGGGGTGCCTCAGACTCACCCAAGTCCCCCAGGCC GCTACCTGGGGTGCCTCAGATTCACCCAAGTCCCCCAGGCC Direct Gain 0 0.966626736438754 0 0.999630510807037 prediction 0.933253472877507 Functional Gain - FLJ34503 ENSG00000175967 ncRNA_exonic Human antisense chr6:114225576 chr6:114225576 . . 0 21 hPsi_associated_SNPs_103144 0 0 0 0 0 unknown 0 0.438718596307665 0.999261021614074 0 hPsi_site_2104 iPseU_CNN:0.999261021614074;iRNA_PseU:0 2105 chr19 48519205 48519205 1 + C T rs34647554 48519205 + 48519185 48519225 41 GGAAAGGCTTATAACAGCTGCATCTCCCAGGGCAGCTTCTT GGAAAGGCTTATAACAGCTGTATCTCCCAGGGCAGCTTCTT Direct Gain 0 0.966626119280013 0 0.935018241405487 prediction 0.933252238560027 Functional Gain - ELSPBP1 ENSG00000169393 CDS Human protein_coding chr19:48519205 chr19:48519205 synonymous SNV . 0 21 hPsi_associated_SNPs_103145 0 0 0 0 2 unknown 0 0.435886337106279 0.870036482810974 0 hPsi_site_2105 iPseU_CNN:0.870036482810974;iRNA_PseU:0 2106 chr1 147381070 147381070 1 + G A SKCM 147381070 - 147381050 147381090 41 CGGCCCCTCGCCCTCCACTTCTTGTGCCCCCACCTGAGCGT CGGCCCCTCGCCCTCCACTTTTTGTGCCCCCACCTGAGCGT Direct Gain 0 0.966612056020459 0 0.350877523422241 prediction 0.933224112040918 Functional Gain - GJA8 ENSG00000121634 CDS Human protein_coding chr1:147381070 chr1:147381070 nonsynonymous SNV 0.327 1 21 hPsi_associated_SNPs_103146 0 0 0 0 0 unknown 0 0.438718621936371 0 0 hPsi_site_2106 iPseU_CNN:0;iRNA_PseU:0 2107 chr1 118166160 118166160 1 + G A UCEC 118166160 - 118166140 118166180 41 CAGTCTGTTCTGCAGATGGTCAAAAGCTTCCTCAAAGTCCC CAGTCTGTTCTGCAGATGGTTAAAAGCTTCCTCAAAGTCCC Direct Gain 0 0.966606774106384 0 0.944617807865143 prediction 0.933213548212769 Functional Gain - FAM46C ENSG00000183508 CDS Human protein_coding chr1:118166160 chr1:118166160 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_103147 0 0 1 0 0 Cytosol 0 0.438709602767159 0.889235615730286 0 hPsi_site_2107 iPseU_CNN:0.889235615730286;iRNA_PseU:0 2108 chr10 43883038 43883038 1 + G A COAD 43883038 - 43883018 43883058 41 AGATGGATTGGGTGTTGAAGCACAGTGGTCCCAACAGTGCC AGATGGATTGGGTGTTGAAGTACAGTGGTCCCAACAGTGCC Direct Gain 0 0.966603504117229 0 0.925566971302032 prediction 0.933207008234459 Functional Gain - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43883038 chr10:43883038 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103148 0 0 1 0 0 Cytosol 0 0.438871537977199 0.851133942604064 0 hPsi_site_2108 iPseU_CNN:0.851133942604064;iRNA_PseU:0 2109 chr16 90232838 90232838 1 + C T rs374078383 90232838 + 90232818 90232858 41 ACCAGGCCCAGCTCATGCATCTTGGTGGCCCCTCCAGGCCC ACCAGGCCCAGCTCATGCATTTTGGTGGCCCCTCCAGGCCC Direct Gain 0 0.96659352233235 0 0.447211623191833 prediction 0.933187044664699 Functional Gain - FAM157C ENSG00000260528;ENSG00000261172 ncRNA_intronic Human other chr16:90232838 chr16:90232838 . . 0 21 hPsi_associated_SNPs_103149 0 0 1 0 0 unknown 0 0.438718592545891 0 0 hPsi_site_2109 iPseU_CNN:0;iRNA_PseU:0 2110 chr8 11418172 11418172 1 + C T rs559998633 11418172 + 11418152 11418192 41 GGAGGAGAGACAAGTCTCTTCTTCTTCACAGCCTCTGTCCA GGAGGAGAGACAAGTCTCTTTTTCTTCACAGCCTCTGTCCA Direct Gain 0 0.966585672886791 0 0.990282416343689 prediction 0.933171345773581 Functional Gain - BLK ENSG00000136573 intronic Human protein_coding chr8:11418172 chr8:11418172 . . 0 21 hPsi_associated_SNPs_103150 0 0 0 0 0 exosome 0 0.439484238073182 0.980564832687378 0 hPsi_site_2110 iPseU_CNN:0.980564832687378;iRNA_PseU:0 2111 chr5 145887496 145887496 1 + A T COAD 145887496 + 145887476 145887516 41 TTAAGGAAGATCCTCGATGTATTAAGTTCTCCTCCAGTGAC TTAAGGAAGATCCTCGATGTTTTAAGTTCTCCTCCAGTGAC Direct Gain 0 0.966582286495815 0 0.860754728317261 prediction 0.933164572991629 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145887496 chr5:145887496 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_103151 0 0 1 0 1 Nucleus 0 0.436979159370424 0.721509456634522 0 hPsi_site_2111 iPseU_CNN:0.721509456634522;iRNA_PseU:0 2112 chr19 38939046 38939046 1 + C A UCEC 38939046 - 38939026 38939066 41 GCTAGGTACTGCCCGGTAGTGACATGCCGGACTCGGAGTGG GCTAGGTACTGCCCGGTAGTTACATGCCGGACTCGGAGTGG Direct Gain 0 0.966577773284628 0 1 prediction 0.933155546569256 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:38939046 chr19:38939046 synonymous SNV . 0 21 hPsi_associated_SNPs_103152 0 0 0 0 0 chromatin 0 0.438712249100348 1 0 hPsi_site_2112 iPseU_CNN:1;iRNA_PseU:0 2113 chr16 30972713 30972713 1 + G T UCEC 30972713 + 30972693 30972733 41 GGTGAGGTGGAAGAGGTAGAGATCCTCCTTCACCCCCGTAC GGTGAGGTGGAAGAGGTAGATATCCTCCTTCACCCCCGTAC Direct Gain 0 0.966567741549343 0 0.0294055640697479 prediction 0.933135483098686 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30972713 chr16:30972713 nonsynonymous SNV 0.974 3 21 hPsi_associated_SNPs_103153 0 0 1 0 0 Cytosol 0 0.438718296255128 0 0 hPsi_site_2113 iPseU_CNN:0;iRNA_PseU:0 2114 chr17 78294226 78294226 1 + C T rs7503136 78294226 + 78294206 78294246 41 GCAATGGTGCGATCCTGGCTCACCGCAACCGCTGCCTCCCG GCAATGGTGCGATCCTGGCTTACCGCAACCGCTGCCTCCCG Direct Gain 0 0.966558445793348 0 0.99951183795929 prediction 0.933116891586695 Functional Gain - RNF213 ENSG00000173821 UTR3 Human protein_coding chr17:78294226 chr17:78294226 . . 0 21 hPsi_associated_SNPs_103154 0 0 0 0 0 Nucleus 0 0.438717992243859 0.99902367591858 0 hPsi_site_2114 iPseU_CNN:0.99902367591858;iRNA_PseU:0 2115 chr7 102106340 102106340 1 + G A BLCA 102106340 - 102106320 102106360 41 CAGGTGGTTGTTAGACAGGTCAAGCTCCTGCAGCTGCGTCA CAGGTGGTTGTTAGACAGGTTAAGCTCCTGCAGCTGCGTCA Direct Gain 0 0.966535963292915 0 0.99989378452301 prediction 0.933071926585831 Functional Gain - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102106340 chr7:102106340 nonsynonymous SNV 0.985 3 21 hPsi_associated_SNPs_103155 0 0 0 0 0 Ribosome 0 0.44275019550173 0.99978756904602 0 hPsi_site_2115 iPseU_CNN:0.99978756904602;iRNA_PseU:0 2116 chr19 47634245 47634245 1 + G A CESC 47634245 - 47634225 47634265 41 CCACAGGCGGATCTGCCGGTCATACTGTGCCGCCTCCTCCT CCACAGGCGGATCTGCCGGTTATACTGTGCCGCCTCCTCCT Direct Gain 0 0.966533549508686 0 0.999998211860657 prediction 0.933067099017373 Functional Gain - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47634245 chr19:47634245 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103156 0 0 0 0 0 Ribosome 0 0.438718593105263 0.999996423721314 0 hPsi_site_2116 iPseU_CNN:0.999996423721314;iRNA_PseU:0 2117 chrX 44949096 44949096 1 + G T BLCA 44949096 + 44949076 44949116 41 CGACCTGGAGATTTGGTCTGGATAAATGCAGGCACTGTTCA CGACCTGGAGATTTGGTCTGTATAAATGCAGGCACTGTTCA Direct Gain 0 0.96653143842064 0 0.99492609500885 prediction 0.933062876841279 Functional Gain - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44949096 chrX:44949096 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103157 0 0 0 0 1 Cytosol 0 0.438718584652919 0.9898521900177 0 hPsi_site_2117 iPseU_CNN:0.9898521900177;iRNA_PseU:0 2118 chr3 14105702 14105702 1 + G T UCEC 14105702 + 14105682 14105722 41 ACACGACAAGAGCTGGCGGAGATGCTCAATCTCAGGGAGTA ACACGACAAGAGCTGGCGGATATGCTCAATCTCAGGGAGTA Direct Gain 0 0.966531306667862 0 0.977422595024109 prediction 0.933062613335723 Functional Gain - TPRXL ENSG00000180438 CDS Human transcribed_processed_pseudogene chr3:14105702 chr3:14105702 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_103158 0 0 0 0 0 unknown 0 0.438718587894715 0.954845190048218 0 hPsi_site_2118 iPseU_CNN:0.954845190048218;iRNA_PseU:0 2119 chr5 70751625 70751625 1 + A T rs142427839 70751625 + 70751605 70751645 41 GTGGGGAGGGCGTAGTTCCTAATCCCCTTTCCGGGCAGCCG GTGGGGAGGGCGTAGTTCCTTATCCCCTTTCCGGGCAGCCG Direct Gain 0 0.966520818391631 0 0.99974113702774 prediction 0.933041636783261 Functional Gain - BDP1 ENSG00000145734 UTR5 Human protein_coding chr5:70751625 chr5:70751625 . . 0 21 hPsi_associated_SNPs_103159 0 0 1 0 0 Nucleus 0 0.43871836118796 0.99948227405548 0 hPsi_site_2119 iPseU_CNN:0.99948227405548;iRNA_PseU:0 2120 chr10 118202589 118202589 1 + C T LUSC 118202589 + 118202569 118202609 41 GATCAGTGCGGTTAATTCTTCAACTATCCAAGCCTCATATT GATCAGTGCGGTTAATTCTTTAACTATCCAAGCCTCATATT Direct Gain 0 0.966508902235162 0 0.398711830377579 prediction 0.933017804470325 Functional Gain - PNLIPRP3 ENSG00000203837 CDS Human protein_coding chr10:118202589 chr10:118202589 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_103160 0 0 0 0 2 exosome 0 0.438716048501089 0 0 hPsi_site_2120 iPseU_CNN:0;iRNA_PseU:0 2121 chr1 22828811 22828811 1 + G A UCEC 22828811 - 22828791 22828831 41 AGTAACAGAACAGACAAGGTCTTTCCCTCCTCTGTGCTCCC AGTAACAGAACAGACAAGGTTTTTCCCTCCTCTGTGCTCCC Direct Gain 0 0.966473703415466 0 0.616216719150543 prediction 0.932947406830932 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22828811 chr1:22828811 synonymous SNV . 0 21 hPsi_associated_SNPs_103161 0 0 0 0 0 Nucleus 0 0.438718532577517 0.232433438301086 0 hPsi_site_2121 iPseU_CNN:0.232433438301086;iRNA_PseU:0 2122 chr3 39373990 39373990 1 + C T SKCM 39373990 + 39373970 39374010 41 CTTCTGGGAAACAGCCTGGTCATCCTGGTCCTTGTGGTCTG CTTCTGGGAAACAGCCTGGTTATCCTGGTCCTTGTGGTCTG Direct Gain 0 0.966469735568842 0 0.666323840618134 prediction 0.932939471137684 Functional Gain - CCR8 ENSG00000179934 CDS Human protein_coding chr3:39373990 chr3:39373990 synonymous SNV . 0 21 hPsi_associated_SNPs_103162 0 0 0 0 0 exosome 0 0.438718594154976 0.332647681236268 0 hPsi_site_2122 iPseU_CNN:0.332647681236268;iRNA_PseU:0 2123 chr3 64085238 64085238 1 + G T CESC 64085238 + 64085218 64085258 41 AACGGCGGTTGTCGTCGCGTGAAGTAGCTCTTCTCCGGGTG AACGGCGGTTGTCGTCGCGTTAAGTAGCTCTTCTCCGGGTG Direct Gain 0 0.966462412092049 0 0.987702012062073 prediction 0.932924824184097 Functional Gain - PRICKLE2 ENSG00000163637 CDS Human protein_coding chr3:64085238 chr3:64085238 stopgain 0.080 0 21 hPsi_associated_SNPs_103163 0 0 0 0 0 Endoplasmic reticulum 0 0.438717384778791 0.975404024124146 0 hPsi_site_2123 iPseU_CNN:0.975404024124146;iRNA_PseU:0 2124 chr5 115351338 115351338 1 + G A UCEC 115351338 - 115351318 115351358 41 GAATGGAGATGTGCTGATGGCATACTCCATATATCTGCAAA GAATGGAGATGTGCTGATGGTATACTCCATATATCTGCAAA Direct Gain 0 0.966457134888403 0 0.999906182289124 prediction 0.932914269776806 Functional Gain - LVRN ENSG00000172901 CDS Human protein_coding chr5:115351338 chr5:115351338 nonsynonymous SNV 0.803 0 21 hPsi_associated_SNPs_103164 0 0 0 0 0 Cytosol 0 0.43870379710475 0.999812364578248 0 hPsi_site_2124 iPseU_CNN:0.999812364578248;iRNA_PseU:0 2125 chr19 56369767 56369767 1 + C T SKCM 56369767 + 56369747 56369787 41 GAAAGTGAACAGCTGTTTTCCATATGCCAAATCCCGCTCCT GAAAGTGAACAGCTGTTTTCTATATGCCAAATCCCGCTCCT Direct Gain 0 0.966454403034747 0 0.323492795228958 prediction 0.932908806069495 Functional Gain - NLRP4 ENSG00000160505 CDS Human protein_coding chr19:56369767 chr19:56369767 synonymous SNV . 0 21 hPsi_associated_SNPs_103165 0 0 0 0 0 exosome 0 0.438716838663524 0 0 hPsi_site_2125 iPseU_CNN:0;iRNA_PseU:0 2126 chrX 49645045 49645045 1 + G T COAD 49645045 + 49645025 49645065 41 TCAGTGCCAGGCCTTGGTGAGAAATTCCCAACCTGGGAAAC TCAGTGCCAGGCCTTGGTGATAAATTCCCAACCTGGGAAAC Direct Gain 0 0.96644533890787 0 0.93052476644516 prediction 0.93289067781574 Functional Gain - USP27X ENSG00000242013 CDS Human other chrX:49645045 chrX:49645045 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_103166 0 0 0 0 0 exosome 0 0.438718602751611 0.86104953289032 0 hPsi_site_2126 iPseU_CNN:0.86104953289032;iRNA_PseU:0 2127 chr20 30898575 30898575 1 + G T TGCT 30898575 + 30898555 30898595 41 AGAGACTCTGACCACTCTGCGATATGCCAACCGTGCCAAAA AGAGACTCTGACCACTCTGCTATATGCCAACCGTGCCAAAA Direct Gain 0 0.966438361151194 0 0.999987602233887 prediction 0.932876722302387 Functional Gain - KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898575 chr20:30898575 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103167 0 0 1 0 0 Ribosome 0 0.438618253806015 0.999975204467774 0 hPsi_site_2127 iPseU_CNN:0.999975204467774;iRNA_PseU:0 2128 chr10 124402766 124402766 1 + G A UCEC 124402766 - 124402746 124402786 41 AAGAGGGGTCATACGCTCTGCACACCACCATTTTACAACGC AAGAGGGGTCATACGCTCTGTACACCACCATTTTACAACGC Direct Gain 0 0.966430070331875 0 0.9838547706604 prediction 0.932860140663751 Functional Gain - DMBT1 ENSG00000187908 CDS Human protein_coding chr10:124402766 chr10:124402766 nonsynonymous SNV 0.681 4 21 hPsi_associated_SNPs_103168 0 0 0 0 0 exosome 0 0.44182737402085 0.9677095413208 0 hPsi_site_2128 iPseU_CNN:0.9677095413208;iRNA_PseU:0 2129 chr19 54251891 54251891 1 + C A UCEC 54251891 - 54251871 54251911 41 TTTGGAGGGTCACAGCCTGAGATCTTCTTGCTCCAGGACTC TTTGGAGGGTCACAGCCTGATATCTTCTTGCTCCAGGACTC Direct Gain 0 0.966420536312334 0 0.962128102779388 prediction 0.932841072624669 Functional Gain - MIR521-1 ENSG00000207634 ncRNA_exonic Human miRNA chr19:54251891 chr19:54251891 . . 0 21 hPsi_associated_SNPs_103169 0 0 0 0 0 unknown 0 0.438265032286174 0.924256205558776 0 hPsi_site_2129 iPseU_CNN:0.924256205558776;iRNA_PseU:0 2130 chr18 9337340 9337340 1 + G A UCEC 9337340 - 9337320 9337360 41 TTAGTCCTACCTGAATGAGGCATTTGCTCACATCACTAGCA TTAGTCCTACCTGAATGAGGTATTTGCTCACATCACTAGCA Direct Gain 0 0.966417221942749 0 0.996059417724609 prediction 0.932834443885498 Functional Gain - TWSG1 ENSG00000128791 CDS Human protein_coding chr18:9337340 chr18:9337340 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103170 0 0 0 0 0 Ribosome 0 0.438755015486423 0.992118835449218 0 hPsi_site_2130 iPseU_CNN:0.992118835449218;iRNA_PseU:0 2131 chr3 12475606 12475606 1 + C T BLCA 12475606 + 12475586 12475626 41 CGGAGACAGACATGAGTCTTCACCCGCTCCTGCAGGAGATC CGGAGACAGACATGAGTCTTTACCCGCTCCTGCAGGAGATC Direct Gain 0 0.966400815222152 0 0.0795017182826996 prediction 0.932801630444304 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12475606 chr3:12475606 nonsynonymous SNV 0.925 2 21 hPsi_associated_SNPs_103171 0 0 1 0 0 Cytosol 0 0.438819922650955 0 0 hPsi_site_2131 iPseU_CNN:0;iRNA_PseU:0 2132 chr20 56140665 56140665 1 + C A rs115841045 56140665 - 56140645 56140685 41 TTCAGGGCATCCTCCTTGGGGATGTAGCCTATGGGCGTGAG TTCAGGGCATCCTCCTTGGGTATGTAGCCTATGGGCGTGAG Direct Gain 0 0.966400138847508 0 0.906026601791382 prediction 0.932800277695016 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140665 chr20:56140665 synonymous SNV . 0 21 hPsi_associated_SNPs_103172 0 0 0 0 0 exosome 0 0.438718593035893 0.812053203582764 0 hPsi_site_2132 iPseU_CNN:0.812053203582764;iRNA_PseU:0 2133 chr5 112860756 112860756 1 + G A BLCA 112860756 - 112860736 112860776 41 GCATGTTTTGTATTATGAGTCAAATTACAGGTCATCATTGC GCATGTTTTGTATTATGAGTTAAATTACAGGTCATCATTGC Direct Gain 0 0.966388229757783 0 0.999982953071594 prediction 0.932776459515566 Functional Gain - YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112860756 chr5:112860756 synonymous SNV . 0 21 hPsi_associated_SNPs_103173 0 0 0 0 0 Cytosol 0 0.443306331376344 0.999965906143188 0 hPsi_site_2133 iPseU_CNN:0.999965906143188;iRNA_PseU:0 2134 chr7 5105149 5105149 1 + T A STAD 5105149 - 5105129 5105169 41 GAAGGCTGATCTGTGGTGGAATTTTTTCCCACACTCGTTAC GAAGGCTGATCTGTGGTGGATTTTTTTCCCACACTCGTTAC Direct Gain 0 0.966378881264054 0 0.725985884666443 prediction 0.932757762528109 Functional Gain - RBAK ENSG00000146587 CDS Human protein_coding chr7:5105149 chr7:5105149 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103174 0 0 0 0 0 Cytosol 0 0.438719318306847 0.451971769332886 0 hPsi_site_2134 iPseU_CNN:0.451971769332886;iRNA_PseU:0 2135 chr10 75560431 75560431 1 + C T STAD 75560431 + 75560411 75560451 41 GGAGATGCTGGGTCGCCGGGCACACAACGATCACCCCAACA GGAGATGCTGGGTCGCCGGGTACACAACGATCACCCCAACA Direct Gain 0 0.966378384216537 0 0.999999046325684 prediction 0.932756768433074 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75560431 chr10:75560431 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103175 0 0 1 0 2 Cytosol 0 0.438720937393766 0.999998092651368 0 hPsi_site_2135 iPseU_CNN:0.999998092651368;iRNA_PseU:0 2136 chr10 14885467 14885467 1 + G A rs567409809 14885467 - 14885447 14885487 41 CAGGGGCTGGGCTCCCCGGACACACCCAGTCTGGCCATGGG CAGGGGCTGGGCTCCCCGGATACACCCAGTCTGGCCATGGG Direct Gain 0 0.966355882822444 0 0.999098539352417 prediction 0.932711765644888 Functional Gain - HSPA14 ENSG00000187522 CDS Human protein_coding chr10:14885467 chr10:14885467 nonsynonymous SNV 0.144 1 21 hPsi_associated_SNPs_103176 0 0 0 0 0 Cytosol 0 0.438718097740759 0.998197078704834 0 hPsi_site_2136 iPseU_CNN:0.998197078704834;iRNA_PseU:0 2137 chr11 134021029 134021029 1 + C A rs114365266 134021029 - 134021009 134021049 41 TGAAAGACAAGGTGAGTAGTGAGAGCCATTCTCCAGGCACA TGAAAGACAAGGTGAGTAGTTAGAGCCATTCTCCAGGCACA Direct Gain 0 0.96632828986725 0 0.999998211860657 prediction 0.9326565797345 Functional Gain - JAM3 ENSG00000166086 UTR3 Human protein_coding chr11:134021029 chr11:134021029 . . 0 21 hPsi_associated_SNPs_103177 0 0 1 0 0 nucleoplasm 0 0.438774254299429 0.999996423721314 0 hPsi_site_2137 iPseU_CNN:0.999996423721314;iRNA_PseU:0 2138 chr7 150068727 150068727 1 + C T BLCA 150068727 + 150068707 150068747 41 GAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCA GAGGCTGGGTGGCCCTGGTTTTGCATCTGCGGGCCCATTCA Direct Gain 0 0.966326075070732 0 0.942412436008453 prediction 0.932652150141463 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068727 chr7:150068727 synonymous SNV . 0 21 hPsi_associated_SNPs_103178 0 0 1 0 0 Endoplasmic reticulum 0 0.438718507642457 0.884824872016906 0 hPsi_site_2138 iPseU_CNN:0.884824872016906;iRNA_PseU:0 2139 chr17 47299509 47299509 1 + G A ESCA 47299509 - 47299489 47299529 41 GGGTGGAGGCAGCCCCAATTCATCTCCATCCAGGGGTGGAG GGGTGGAGGCAGCCCCAATTTATCTCCATCCAGGGGTGGAG Direct Gain 0 0.966321819262375 0 0.999962687492371 prediction 0.93264363852475 Functional Gain - ABI3 ENSG00000108798 CDS Human protein_coding chr17:47299509 chr17:47299509 nonsynonymous SNV 0.279 0 21 hPsi_associated_SNPs_103179 0 0 0 0 0 exosome 0 0.438718592881448 0.999925374984742 0 hPsi_site_2139 iPseU_CNN:0.999925374984742;iRNA_PseU:0 2140 chrX 37028042 37028042 1 + C A OV 37028042 - 37028022 37028062 41 GAGGCTCTGGGCGGAGATGGGACACTCCAGTCTCAGAAGGC GAGGCTCTGGGCGGAGATGGTACACTCCAGTCTCAGAAGGC Direct Gain 0 0.966320899090295 0 0.99995231628418 prediction 0.93264179818059 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37028042 chrX:37028042 nonsynonymous SNV 0.006 2 21 hPsi_associated_SNPs_103180 0 0 0 0 0 unknown 0 0.438718561295253 0.99990463256836 0 hPsi_site_2140 iPseU_CNN:0.99990463256836;iRNA_PseU:0 2141 chr15 41749980 41749980 1 + G A BLCA 41749980 - 41749960 41750000 41 CAGACGGGCCCTGTCTTCCTCATCTCCCATGAGGTCTTCTC CAGACGGGCCCTGTCTTCCTTATCTCCCATGAGGTCTTCTC Direct Gain 0 0.96631146973674 0 0.972981095314026 prediction 0.93262293947348 Functional Gain - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41749980 chr15:41749980 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103181 0 0 0 0 0 Cytosol 0 0.438722813880439 0.945962190628052 0 hPsi_site_2141 iPseU_CNN:0.945962190628052;iRNA_PseU:0 2142 chr10 31784752 31784752 1 + G A SKCM 31784752 - 31784732 31784772 41 AGTACCTGTACATCCTGCTTCATCTGCCTGAGCTTCAGGCC AGTACCTGTACATCCTGCTTTATCTGCCTGAGCTTCAGGCC Direct Gain 0 0.966301403520698 0 0.956030249595642 prediction 0.932602807041397 Functional Gain - ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31784752 chr10:31784752 nonsynonymous SNV 0.936 0 21 hPsi_associated_SNPs_103182 0 0 0 0 0 Nucleus 0 0.438708406395655 0.912060499191284 0 hPsi_site_2142 iPseU_CNN:0.912060499191284;iRNA_PseU:0 2143 chr1 62550226 62550226 1 + G A LGG 62550226 - 62550206 62550246 41 CCTGTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGAC CCTGTCCAGGGACAATGGGATACGTTGCGGGGTCCACTGAC Direct Gain 0 0.966297168125562 0 0.997937917709351 prediction 0.932594336251124 Functional Gain - PATJ ENSG00000132849 CDS Human protein_coding chr1:62550226 chr1:62550226 nonsynonymous SNV 0.913 4 21 hPsi_associated_SNPs_103183 0 0 0 0 0 Nucleus 0 0.428925311832285 0.995875835418702 0 hPsi_site_2143 iPseU_CNN:0.995875835418702;iRNA_PseU:0 2144 chr7 65617296 65617296 1 + G A LIHC 65617296 - 65617276 65617316 41 ACATTGCTGTTTGTATTCTTCTTCTGCTCAGCCTCTGGCTC ACATTGCTGTTTGTATTCTTTTTCTGCTCAGCCTCTGGCTC Direct Gain 0 0.966288985925439 0 0.00977399945259094 prediction 0.932577971850878 Functional Gain - CRCP ENSG00000241258 CDS Human protein_coding chr7:65617296 chr7:65617296 synonymous SNV . 0 21 hPsi_associated_SNPs_103184 0 0 0 0 0 Ribosome 0 0.438635501655752 0 0 hPsi_site_2144 iPseU_CNN:0;iRNA_PseU:0 2145 chr1 201849040 201849040 1 + G A rs61745609 201849040 - 201849020 201849060 41 CGAGTAGCTGGGATTACAGGCACGTGCCACCATGCCCAGCT CGAGTAGCTGGGATTACAGGTACGTGCCACCATGCCCAGCT Direct Gain 0 0.966286684691449 0 0.999724507331848 prediction 0.932573369382897 Functional Gain - IPO9 ENSG00000198700 UTR3 Human protein_coding chr1:201849040 chr1:201849040 . . 0 21 hPsi_associated_SNPs_103185 0 0 0 0 0 Nucleus 0 0.4387185924821 0.999449014663696 0 hPsi_site_2145 iPseU_CNN:0.999449014663696;iRNA_PseU:0 2146 chr7 132990735 132990735 1 + C T BLCA 132990735 + 132990715 132990755 41 ATGAACCTTCACTTGGTTCTCATAGATGAACTACACCGGCA ATGAACCTTCACTTGGTTCTTATAGATGAACTACACCGGCA Direct Gain 0 0.966275484765886 0 0.982641935348511 prediction 0.932550969531772 Functional Gain - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:132990735 chr7:132990735 synonymous SNV . 0 21 hPsi_associated_SNPs_103186 0 0 1 0 1 Nucleus 0 0.438731047564224 0.965283870697022 0 hPsi_site_2146 iPseU_CNN:0.965283870697022;iRNA_PseU:0 2147 chrX 152225523 152225523 1 + G T UCEC 152225523 + 152225503 152225543 41 GGCGAGGATGAGTTTGAGGAGACACTCCAGGAGGCTTGCAG GGCGAGGATGAGTTTGAGGATACACTCCAGGAGGCTTGCAG Direct Gain 0 0.966272832177274 0 0.999985694885254 prediction 0.932545664354548 Functional Gain - PNMA3 ENSG00000183837 CDS Human protein_coding chrX:152225523 chrX:152225523 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_103187 0 0 0 0 0 exosome 0 0.438728105424369 0.999971389770508 0 hPsi_site_2147 iPseU_CNN:0.999971389770508;iRNA_PseU:0 2148 chr14 67779271 67779271 1 + G A CESC 67779271 - 67779251 67779291 41 ATAAGGGTCATCTGAGGGGTCATAGTCAAAATGAGCTTTTA ATAAGGGTCATCTGAGGGGTTATAGTCAAAATGAGCTTTTA Direct Gain 0 0.96627068557081 0 0.987732589244843 prediction 0.93254137114162 Functional Gain - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67779271 chr14:67779271 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103188 0 0 0 0 0 Ribosome 0 0.438718480823086 0.975465178489686 0 hPsi_site_2148 iPseU_CNN:0.975465178489686;iRNA_PseU:0 2149 chr14 75747569 75747569 1 + C T CESC 75747569 + 75747549 75747589 41 GAGAAGGAAAAACTAGAGTTCATCCTGGCAGCTCACCGACC GAGAAGGAAAAACTAGAGTTTATCCTGGCAGCTCACCGACC Direct Gain 0 0.966260114655508 0 0.289400994777679 prediction 0.932520229311016 Functional Gain - FOS ENSG00000170345 CDS Human protein_coding chr14:75747569 chr14:75747569 synonymous SNV . 0 21 hPsi_associated_SNPs_103189 0 0 0 0 1 Endoplasmic reticulum 0 0.438718907083436 0 0 hPsi_site_2149 iPseU_CNN:0;iRNA_PseU:0 2150 chr1 32829624 32829624 1 + G T TGCT 32829624 + 32829604 32829644 41 CCCACGATAGCAAAAAAGGTGATGTCTGGAGCATGGGTGTG CCCACGATAGCAAAAAAGGTTATGTCTGGAGCATGGGTGTG Direct Gain 0 0.9662469322641 0 0.325091421604156 prediction 0.9324938645282 Functional Gain - TSSK3 ENSG00000162526 CDS Human protein_coding chr1:32829624 chr1:32829624 nonsynonymous SNV 0.943 4 21 hPsi_associated_SNPs_103190 0 0 0 0 0 chromatin 0 0.43872630542289 0 0 hPsi_site_2150 iPseU_CNN:0;iRNA_PseU:0 2151 chr9 124522400 124522400 1 + G A rs34839326 124522400 - 124522380 124522420 41 AGGTAACTGTTGCGCTCCTTCTTCTTCTTCTTGTCGGTCTC AGGTAACTGTTGCGCTCCTTTTTCTTCTTCTTGTCGGTCTC Direct Gain 0 0.966237968640953 0 0.344491481781006 prediction 0.932475937281906 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124522400 chr9:124522400 synonymous SNV . 0 21 hPsi_associated_SNPs_103191 0 0 0 0 0 Ribosome 0 0.438717645581535 0 0 hPsi_site_2151 iPseU_CNN:0;iRNA_PseU:0 2152 chr19 17394221 17394221 1 + C T COAD 17394221 + 17394201 17394241 41 CCAGGGCACTGGGATTACAGCTCAGACGCCTCTTTCGTCAC CCAGGGCACTGGGATTACAGTTCAGACGCCTCTTTCGTCAC Direct Gain 0 0.966199422631556 0 0.943816900253296 prediction 0.932398845263111 Functional Gain - ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17394221 chr19:17394221 synonymous SNV . 0 21 hPsi_associated_SNPs_103192 0 0 0 0 0 chromatin 0 0.43872843734579 0.887633800506592 0 hPsi_site_2152 iPseU_CNN:0.887633800506592;iRNA_PseU:0 2153 chr10 46250521 46250521 1 + G A HNSC 46250521 - 46250501 46250541 41 GGGTGCCGAGAAAAAGTCGTCATCATCATCACCATCATCAT GGGTGCCGAGAAAAAGTCGTTATCATCATCACCATCATCAT Direct Gain 0 0.966190837436555 0 0.999964714050293 prediction 0.932381674873111 Functional Gain - WASHC2C ENSG00000172661 CDS Human protein_coding chr10:46250521 chr10:46250521 nonsynonymous SNV 0.197 3 21 hPsi_associated_SNPs_103193 0 0 0 0 0 unknown 0 0.447644255767286 0.999929428100586 0 hPsi_site_2153 iPseU_CNN:0.999929428100586;iRNA_PseU:0 2154 chr11 1095748 1095748 1 + G A SKCM 1095748 - 1095728 1095768 41 GGTGGGCATGGGCGGCGGCTCACACTCCACCTTCACGATCT GGTGGGCATGGGCGGCGGCTTACACTCCACCTTCACGATCT Direct Gain 0 0.966183659889868 0 0.999933362007141 prediction 0.932367319779736 Functional Gain - MUC2 ENSG00000198788 CDS Human processed_transcript chr11:1095748 chr11:1095748 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103194 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592794154 0.999866724014282 0 hPsi_site_2154 iPseU_CNN:0.999866724014282;iRNA_PseU:0 2155 chr4 30725711 30725711 1 + G A OV 30725711 - 30725691 30725731 41 AAGATGATTAGAATCACCGTCATAATGCCAGCAACCACGCC AAGATGATTAGAATCACCGTTATAATGCCAGCAACCACGCC Direct Gain 0 0.966168884623519 0 0.99999988079071 prediction 0.932337769247038 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30725711 chr4:30725711 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_103195 0 0 0 0 0 Ribosome 0 0.438733152610108 0.99999976158142 0 hPsi_site_2155 iPseU_CNN:0.99999976158142;iRNA_PseU:0 2156 chr5 140237028 140237028 1 + G A UCEC 140237028 - 140237008 140237048 41 TGGCAGCCTGGCGGGTTGTTCTCCTTCACGAACACCGTGTA TGGCAGCCTGGCGGGTTGTTTTCCTTCACGAACACCGTGTA Direct Gain 0 0.966165107280065 0 0.984109878540039 prediction 0.93233021456013 Functional Gain - PCDHA10 ENSG00000250120 CDS Human protein_coding chr5:140237028 chr5:140237028 synonymous SNV . 0 21 hPsi_associated_SNPs_103196 0 0 0 0 0 exosome 0 0.437278992226594 0.968219757080078 0 hPsi_site_2156 iPseU_CNN:0.968219757080078;iRNA_PseU:0 2157 chr22 26118708 26118708 1 + C A rs149064934 26118708 - 26118688 26118728 41 GGGGAGTCTAAGATGTGTTTGATATCAGACATAAAAATTTA GGGGAGTCTAAGATGTGTTTTATATCAGACATAAAAATTTA Direct Gain 0 0.966148496748058 0 0.326449334621429 prediction 0.932296993496115 Functional Gain - GRK3 ENSG00000100077 UTR3 Human protein_coding chr22:26118708 chr22:26118708 . . 0 21 hPsi_associated_SNPs_103197 0 0 0 0 0 chromatin 0 0.438718593000245 0 0 hPsi_site_2157 iPseU_CNN:0;iRNA_PseU:0 2158 chr19 14184008 14184008 1 + C T rs547015415 14184008 + 14183988 14184028 41 AAAGGGCGGAGGTCCAGGGGCAGCATCCCCCTCCAGGCCCT AAAGGGCGGAGGTCCAGGGGTAGCATCCCCCTCCAGGCCCT Direct Gain 0 0.966135973590093 0 0.999769985675812 prediction 0.932271947180185 Functional Gain - MISP3 ENSG00000141854 CDS Human protein_coding chr19:14184008 chr19:14184008 stopgain 0.012 0 21 hPsi_associated_SNPs_103198 0 0 0 0 0 unknown 0 0.43871859329009 0.999539971351624 0 hPsi_site_2158 iPseU_CNN:0.999539971351624;iRNA_PseU:0 2159 chr2 68872977 68872977 1 + G A SKCM 68872977 - 68872957 68872997 41 GTGTTGGTGGCATTGTCATCCATGAACCCCATGGTGGTCTC GTGTTGGTGGCATTGTCATCTATGAACCCCATGGTGGTCTC Direct Gain 0 0.966135775818011 0 0.995680391788483 prediction 0.932271551636021 Functional Gain - PROKR1 ENSG00000169618 CDS Human protein_coding chr2:68872977 chr2:68872977 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_103199 0 0 0 0 0 exosome 0 0.438287257799802 0.991360783576966 0 hPsi_site_2159 iPseU_CNN:0.991360783576966;iRNA_PseU:0 2160 chr9 92220039 92220039 1 + G A LUSC 92220039 - 92220019 92220059 41 CCGCGGACTTCTTCCAGAGTCATAGTGCGATCAACCAGCAG CCGCGGACTTCTTCCAGAGTTATAGTGCGATCAACCAGCAG Direct Gain 0 0.966131096303527 0 0.996596813201904 prediction 0.932262192607054 Functional Gain - GADD45G ENSG00000130222 CDS Human protein_coding chr9:92220039 chr9:92220039 nonsynonymous SNV 0.987 2 21 hPsi_associated_SNPs_103200 0 0 0 0 0 exosome 0 0.43871179685049 0.993193626403808 0 hPsi_site_2160 iPseU_CNN:0.993193626403808;iRNA_PseU:0 2161 chr18 10471557 10471557 1 + C A STAD 10471557 - 10471537 10471577 41 TAGAATCTGTAGGACCTTGTGATGAACTCTGGGCCTGACCT TAGAATCTGTAGGACCTTGTTATGAACTCTGGGCCTGACCT Direct Gain 0 0.966129694262996 0 0.999955534934998 prediction 0.932259388525992 Functional Gain - APCDD1 ENSG00000154856 CDS Human protein_coding chr18:10471557 chr18:10471557 synonymous SNV . 0 21 hPsi_associated_SNPs_103201 0 0 0 0 0 Cytosol 0 0.438716489602985 0.999911069869996 0 hPsi_site_2161 iPseU_CNN:0.999911069869996;iRNA_PseU:0 2162 chr10 73565969 73565969 1 + G A COAD 73565969 - 73565949 73565989 41 ACCTGCAGCGGCTGCATAGTCTCGTATGGCACTGGCTGGCC ACCTGCAGCGGCTGCATAGTTTCGTATGGCACTGGCTGGCC Direct Gain 0 0.966117028254759 0 0.999987244606018 prediction 0.932234056509518 Functional Gain - CDH23 ENSG00000107736 CDS Human protein_coding chr10:73565969 chr10:73565969 synonymous SNV . 0 21 hPsi_associated_SNPs_103202 0 0 0 0 0 exosome 0 0.4387185877137 0.999974489212036 0 hPsi_site_2162 iPseU_CNN:0.999974489212036;iRNA_PseU:0 2163 chr17 38344965 38344965 1 + C T rs143627858 38344965 + 38344945 38344985 41 GATAATTATCCCATACTGCTCATTGTCCTCTCTTCTGACCC GATAATTATCCCATACTGCTTATTGTCCTCTCTTCTGACCC Direct Gain 0 0.966109711433863 0 0.106445401906967 prediction 0.932219422867725 Functional Gain - RAPGEFL1 ENSG00000108352 intronic Human protein_coding chr17:38344965 chr17:38344965 . . 0 21 hPsi_associated_SNPs_103203 0 0 0 0 0 chromatin 0 0.438689914871975 0 0 hPsi_site_2163 iPseU_CNN:0;iRNA_PseU:0 2164 chr1 228468419 228468419 1 + G A CESC 228468419 - 228468399 228468439 41 GGCGTCTTCAGGGCTCACGTCATGCACCACGAGCCCCCGCG GGCGTCTTCAGGGCTCACGTTATGCACCACGAGCCCCCGCG Direct Gain 0 0.966088387870722 0 0.9930499792099 prediction 0.932176775741444 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228468419 chr1:228468419 nonsynonymous SNV 0.053 2 21 hPsi_associated_SNPs_103204 0 0 0 0 0 Ribosome 0 0.438624743567595 0.9860999584198 0 hPsi_site_2164 iPseU_CNN:0.9860999584198;iRNA_PseU:0 2165 chr10 71048521 71048521 1 + G A LUAD 71048521 - 71048501 71048541 41 AACACCAGAGCTTACCGATTCTCGCTGGCAGATCTGCCCCA AACACCAGAGCTTACCGATTTTCGCTGGCAGATCTGCCCCA Direct Gain 0 0.966080481404009 0 0.0138055980205536 prediction 0.932160962808017 Functional Gain - HK1 ENSG00000156515 CDS Human protein_coding chr10:71048521 chr10:71048521 nonsynonymous SNV 0.019 1 21 hPsi_associated_SNPs_103205 0 0 0 0 0 chromatin 0 0.438718593493305 0 0 hPsi_site_2165 iPseU_CNN:0;iRNA_PseU:0 2166 chr18 33800081 33800081 1 + C T BLCA 33800081 + 33800061 33800101 41 GGAGCTGGATGGTTGTGAATCACAATGGTGTTTGCCTGAGT GGAGCTGGATGGTTGTGAATTACAATGGTGTTTGCCTGAGT Direct Gain 0 0.966078899614818 0 0.999625205993652 prediction 0.932157799229635 Functional Gain - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33800081 chr18:33800081 nonsynonymous SNV 0.993 2 21 hPsi_associated_SNPs_103206 0 0 0 0 2 Ribosome 0 0.438718552951237 0.999250411987304 0 hPsi_site_2166 iPseU_CNN:0.999250411987304;iRNA_PseU:0 2167 chr1 249132572 249132572 1 + G T rs532969325 249132572 + 249132552 249132592 41 GGCGAGAGGGACAGGAGCGTGACCTCCCCATCCCGAGGGGC GGCGAGAGGGACAGGAGCGTTACCTCCCCATCCCGAGGGGC Direct Gain 0 0.966068808500619 0 0.999997019767761 prediction 0.932137617001238 Functional Gain - ZNF672 ENSG00000171161 UTR5 Human protein_coding chr1:249132572 chr1:249132572 . . 0 21 hPsi_associated_SNPs_103207 0 0 1 0 0 Ribosome 0 0.438692416737192 0.999994039535522 0 hPsi_site_2167 iPseU_CNN:0.999994039535522;iRNA_PseU:0 2168 chr1 16261540 16261540 1 + G T SKCM 16261540 + 16261520 16261560 41 GTGAAGGTTCTCACCCAGGGGATCAACACACCCCCTGTGCT GTGAAGGTTCTCACCCAGGGTATCAACACACCCCCTGTGCT Direct Gain 0 0.966058087247277 0 0.506429493427277 prediction 0.932116174494554 Functional Gain - SPEN ENSG00000065526 CDS Human protein_coding chr1:16261540 chr1:16261540 synonymous SNV . 0 21 hPsi_associated_SNPs_103208 0 0 1 0 0 Endoplasmic reticulum 0 0.4387856000714 0.0128589868545541 0 hPsi_site_2168 iPseU_CNN:0.0128589868545541;iRNA_PseU:0 2169 chr15 85438326 85438326 1 + C T CESC 85438326 + 85438306 85438346 41 GGTTTCTCAAGCCTCAGGGCCATCCCCGCCTGCTGCTCTGG GGTTTCTCAAGCCTCAGGGCTATCCCCGCCTGCTGCTCTGG Direct Gain 0 0.966056357756687 0 0.905016362667084 prediction 0.932112715513375 Functional Gain - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85438326 chr15:85438326 nonsynonymous SNV 0.010 2 21 hPsi_associated_SNPs_103209 0 0 0 0 1 Endoplasmic reticulum 0 0.438718592995169 0.810032725334168 0 hPsi_site_2169 iPseU_CNN:0.810032725334168;iRNA_PseU:0 2170 chr2 201768269 201768269 1 + C T STAD 201768269 + 201768249 201768289 41 GCTTCCCAAGGAATAAATGTCATCCTCTGTGAACACAGCAA GCTTCCCAAGGAATAAATGTTATCCTCTGTGAACACAGCAA Direct Gain 0 0.966054688149867 0 0.998590230941772 prediction 0.932109376299733 Functional Gain - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201768269 chr2:201768269 synonymous SNV . 0 21 hPsi_associated_SNPs_103210 0 0 1 2 1 Ribosome 0 0.438900237829322 0.997180461883544 0 hPsi_site_2170 iPseU_CNN:0.997180461883544;iRNA_PseU:0 2171 chr5 140794518 140794518 1 + G T LUSC 140794518 + 140794498 140794538 41 GCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGA GCAGAGCCCGGCTACCTGGTTACCAAGGTGGTGGCGGTGGA Direct Gain 0 0.966051828211835 0 0.999691426753998 prediction 0.93210365642367 Functional Gain - PCDHGA10 ENSG00000253846 CDS Human protein_coding chr5:140794518 chr5:140794518 synonymous SNV . 0 21 hPsi_associated_SNPs_103211 0 0 0 0 0 exosome 0 0.438765655823498 0.999382853507996 0 hPsi_site_2171 iPseU_CNN:0.999382853507996;iRNA_PseU:0 2172 chr12 6426755 6426755 1 + G A GBM 6426755 - 6426735 6426775 41 GTGGGGCTTGATAAGCAAGTCACAGAGCATCTGCCTCCCAG GTGGGGCTTGATAAGCAAGTTACAGAGCATCTGCCTCCCAG Direct Gain 0 0.966047936640995 0 0.999980688095093 prediction 0.93209587328199 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6426755 chr12:6426755 nonsynonymous SNV 0.934 4 21 hPsi_associated_SNPs_103212 0 0 0 0 0 Nucleus 0 0.438718592660794 0.999961376190186 0 hPsi_site_2172 iPseU_CNN:0.999961376190186;iRNA_PseU:0 2173 chr12 48527166 48527166 1 + G A LUAD 48527166 - 48527146 48527186 41 GGTGCCACAGAAGTCATTGTCAATTGACCCAACCAGGCCCA GGTGCCACAGAAGTCATTGTTAATTGACCCAACCAGGCCCA Direct Gain 0 0.96604470723893 0 0.997821450233459 prediction 0.932089414477859 Functional Gain - PFKM ENSG00000152556 CDS Human protein_coding chr12:48527166 chr12:48527166 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_103213 0 0 0 0 0 Nucleus 0 0.43869626549481 0.995642900466918 0 hPsi_site_2173 iPseU_CNN:0.995642900466918;iRNA_PseU:0 2174 chr4 107249297 107249297 1 + G A BLCA 107249297 - 107249277 107249317 41 GTTACTGCTGTAGACTGTATCACATTTTCAGAAACCATAGA GTTACTGCTGTAGACTGTATTACATTTTCAGAAACCATAGA Direct Gain 0 0.966043197249063 0 0.907358050346375 prediction 0.932086394498126 Functional Gain - AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107249297 chr4:107249297 synonymous SNV . 0 21 hPsi_associated_SNPs_103214 0 0 0 0 0 Ribosome 0 0.438629386208718 0.81471610069275 0 hPsi_site_2174 iPseU_CNN:0.81471610069275;iRNA_PseU:0 2175 chr1 196883786 196883786 1 + T A SKCM 196883786 - 196883766 196883806 41 CTTACTATAACATGTTGGGAAATGGGACCACCCATCTTCAC CTTACTATAACATGTTGGGATATGGGACCACCCATCTTCAC Direct Gain 0 0.966032011413814 0 0.93103301525116 prediction 0.932064022827628 Functional Gain - CFHR4 ENSG00000134365 CDS Human protein_coding chr1:196883786 chr1:196883786 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_103215 0 0 0 0 0 cytosol 0 0.438718592995102 0.86206603050232 0 hPsi_site_2175 iPseU_CNN:0.86206603050232;iRNA_PseU:0 2176 chr3 127323485 127323485 1 + G A BLCA 127323485 - 127323465 127323505 41 CAGAGCCAGTCCCTCGGCCTCATAGGCGTCCAGCTCTGGGA CAGAGCCAGTCCCTCGGCCTTATAGGCGTCCAGCTCTGGGA Direct Gain 0 0.966031898386946 0 0.999968707561493 prediction 0.932063796773891 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323485 chr3:127323485 nonsynonymous SNV 0.819 2 21 hPsi_associated_SNPs_103216 0 0 0 0 0 Cytosol 0 0.438900208322624 0.999937415122986 0 hPsi_site_2176 iPseU_CNN:0.999937415122986;iRNA_PseU:0 2177 chr2 235950902 235950902 1 + C T COAD 235950902 + 235950882 235950922 41 CGGTAGTGACCATTTTTGGGCATGACTGTGCCCCAAAGACG CGGTAGTGACCATTTTTGGGTATGACTGTGCCCCAAAGACG Direct Gain 0 0.966014767690667 0 0.913947999477386 prediction 0.932029535381333 Functional Gain - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950902 chr2:235950902 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_103217 0 0 1 0 0 cytosol 0 0.438698821392065 0.827895998954772 0 hPsi_site_2177 iPseU_CNN:0.827895998954772;iRNA_PseU:0 2178 chr9 34996725 34996725 1 + C T SKCM 34996725 + 34996705 34996745 41 TGGAAGGAAGGCACCAAGATCACCTTCCCCAAAGAAGGCGA TGGAAGGAAGGCACCAAGATTACCTTCCCCAAAGAAGGCGA Direct Gain 0 0.966010849816151 0 0.978639483451843 prediction 0.932021699632303 Functional Gain - DNAJB5 ENSG00000137094 CDS Human protein_coding chr9:34996725 chr9:34996725 synonymous SNV . 0 21 hPsi_associated_SNPs_103218 0 0 0 0 0 exosome 0 0.438719659786571 0.957278966903686 0 hPsi_site_2178 iPseU_CNN:0.957278966903686;iRNA_PseU:0 2179 chr19 39841112 39841112 1 + C A rs188048842 39841112 - 39841092 39841132 41 CAAAAACAAAAAAATGCTGAGATGTTCCAGGACAAACTGCC CAAAAACAAAAAAATGCTGATATGTTCCAGGACAAACTGCC Direct Gain 0 0.965987663204188 0 0.902934074401855 prediction 0.931975326408375 Functional Gain - SAMD4B ENSG00000179134 intronic Human protein_coding chr19:39841112 chr19:39841112 . . 0 21 hPsi_associated_SNPs_103219 0 0 0 0 0 Ribosome 0 0.438719079872174 0.80586814880371 0 hPsi_site_2179 iPseU_CNN:0.80586814880371;iRNA_PseU:0 2180 chr2 185801314 185801314 1 + G T UCEC 185801314 + 185801294 185801334 41 GAAAATAAAAATGGTCCCGAGACATTGGCCCCTTCAAATAC GAAAATAAAAATGGTCCCGATACATTGGCCCCTTCAAATAC Direct Gain 0 0.965980243289756 0 0.933643579483032 prediction 0.931960486579512 Functional Gain - ZNF804A ENSG00000170396 CDS Human protein_coding chr2:185801314 chr2:185801314 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_103220 0 0 0 0 0 nucleoplasm 0 0.438745125886024 0.867287158966064 0 hPsi_site_2180 iPseU_CNN:0.867287158966064;iRNA_PseU:0 2181 chr12 109644533 109644533 1 + G T UCEC 109644533 + 109644513 109644553 41 AGGCTGAACCGTTCACAGGAGAACTCCCTGCCCAGCAGACA AGGCTGAACCGTTCACAGGATAACTCCCTGCCCAGCAGACA Direct Gain 0 0.965980235948013 0 0.995400905609131 prediction 0.931960471896025 Functional Gain - ACACB ENSG00000076555 CDS Human protein_coding chr12:109644533 chr12:109644533 stopgain 0.035 0 21 hPsi_associated_SNPs_103221 0 0 1 0 1 Nucleus 0 0.438718592995676 0.990801811218262 0 hPsi_site_2181 iPseU_CNN:0.990801811218262;iRNA_PseU:0 2182 chr16 58438566 58438566 1 + C A LUAD 58438566 - 58438546 58438586 41 GGTTGGAAGCTGTGATCTGAGAAGCCTGCCCCTTCTCCCAA GGTTGGAAGCTGTGATCTGATAAGCCTGCCCCTTCTCCCAA Direct Gain 0 0.965974277835411 0 0.939923167228699 prediction 0.931948555670822 Functional Gain - GINS3 ENSG00000181938 CDS Human protein_coding chr16:58438566 chr16:58438566 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103222 0 0 0 0 0 Ribosome 0 0.438718594394435 0.879846334457398 0 hPsi_site_2182 iPseU_CNN:0.879846334457398;iRNA_PseU:0 2183 chr8 110457571 110457571 1 + A T SKCM 110457571 + 110457551 110457591 41 GTAAAGGCTTGGCTCTGGGAAACCTGACTGTCAGCAGCCCC GTAAAGGCTTGGCTCTGGGATACCTGACTGTCAGCAGCCCC Direct Gain 0 0.965971623001113 0 0.99999988079071 prediction 0.931943246002226 Functional Gain - PKHD1L1 ENSG00000205038 CDS Human protein_coding chr8:110457571 chr8:110457571 nonsynonymous SNV 0.962 2 21 hPsi_associated_SNPs_103223 0 0 0 0 0 exosome 0 0.438718816584319 0.99999976158142 0 hPsi_site_2183 iPseU_CNN:0.99999976158142;iRNA_PseU:0 2184 chr7 121652585 121652585 1 + C A COAD 121652585 - 121652565 121652605 41 ATAAGAGCTGAGTTGAAGGAGATAACATTTCACTAGAAGCA ATAAGAGCTGAGTTGAAGGATATAACATTTCACTAGAAGCA Direct Gain 0 0.96597037669297 0 0.662553429603577 prediction 0.931940753385941 Functional Gain - PTPRZ1 ENSG00000106278 CDS Human protein_coding chr7:121652585 chr7:121652585 nonsynonymous SNV 0.980 1 21 hPsi_associated_SNPs_103224 0 0 0 0 0 exosome 0 0.438719029050876 0.325106859207154 0 hPsi_site_2184 iPseU_CNN:0.325106859207154;iRNA_PseU:0 2185 chr19 12138191 12138191 1 + C T rs141682499 12138191 + 12138171 12138211 41 GACAGGCTCCCAAATCTGGCCATAAACAAAATCTCTGCAGC GACAGGCTCCCAAATCTGGCTATAAACAAAATCTCTGCAGC Direct Gain 0 0.965970164190679 0 0.995143294334412 prediction 0.931940328381358 Functional Gain - LOC101928464 ENSG00000219665 ncRNA_intronic Human processed_transcript chr19:12138191 chr19:12138191 . . 0 21 hPsi_associated_SNPs_103225 0 0 0 0 0 unknown 0 0.438727552810241 0.990286588668824 0 hPsi_site_2185 iPseU_CNN:0.990286588668824;iRNA_PseU:0 2186 chr14 96944851 96944851 1 + G A LUAD 96944851 - 96944831 96944871 41 ATGCTCTCAGGAAGGTTTATCACACGCTCCTTCAGAAACTC ATGCTCTCAGGAAGGTTTATTACACGCTCCTTCAGAAACTC Direct Gain 0 0.965970097315063 0 0.249770075082779 prediction 0.931940194630125 Functional Gain - AK7 ENSG00000140057 CDS Human protein_coding chr14:96944851 chr14:96944851 synonymous SNV . 0 21 hPsi_associated_SNPs_103226 0 0 0 0 0 nucleoplasm 0 0.438676518300414 0 0 hPsi_site_2186 iPseU_CNN:0;iRNA_PseU:0 2187 chr17 5324736 5324736 1 + G A BLCA 5324736 - 5324716 5324756 41 TGACTGCAAAGCATTCCACTCTTCTTCCATCACCTCTTGAA TGACTGCAAAGCATTCCACTTTTCTTCCATCACCTCTTGAA Direct Gain 0 0.965969038258737 0 0.404311507940292 prediction 0.931938076517473 Functional Gain - RPAIN ENSG00000129197 CDS Human protein_coding chr17:5324736 chr17:5324736 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103227 0 0 0 0 0 Ribosome 0 0.441067064622729 0 0 hPsi_site_2187 iPseU_CNN:0;iRNA_PseU:0 2188 chr16 68293372 68293372 1 + G A BLCA 68293372 - 68293352 68293392 41 ACCAAAGCAGATTTTAGGGTCACGGTCAGGGAAGCTCTCAT ACCAAAGCAGATTTTAGGGTTACGGTCAGGGAAGCTCTCAT Direct Gain 0 0.965968269546715 0 0.935921132564545 prediction 0.93193653909343 Functional Gain - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68293372 chr16:68293372 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_103228 0 0 0 0 0 Ribosome 0 0.438720170965881 0.87184226512909 0 hPsi_site_2188 iPseU_CNN:0.87184226512909;iRNA_PseU:0 2189 chr6 24357867 24357867 1 + C T THCA 24357867 + 24357847 24357887 41 GAAGCTGGACACCTTCTTCTCATGGATGACGACGCGGCGCC GAAGCTGGACACCTTCTTCTTATGGATGACGACGCGGCGCC Direct Gain 0 0.965961298236005 0 0.999999642372131 prediction 0.93192259647201 Functional Gain - DCDC2 ENSG00000146038 CDS Human protein_coding chr6:24357867 chr6:24357867 nonsynonymous SNV 0.996 5 21 hPsi_associated_SNPs_103229 0 0 0 0 0 cytosol 0 0.438694755732836 0.999999284744262 0 hPsi_site_2189 iPseU_CNN:0.999999284744262;iRNA_PseU:0 2190 chr5 140616343 140616343 1 + G T STAD 140616343 + 140616323 140616363 41 CCAGGGCATCTGGTAGACGTGAGCGGCACCGGGACCCTATC CCAGGGCATCTGGTAGACGTTAGCGGCACCGGGACCCTATC Direct Gain 0 0.965948234572767 0 0.982616662979126 prediction 0.931896469145535 Functional Gain - PCDHB18P ENSG00000146001 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:140616343 chr5:140616343 . . 0 21 hPsi_associated_SNPs_103230 0 0 0 0 0 unknown 0 0.438718611270999 0.965233325958252 0 hPsi_site_2190 iPseU_CNN:0.965233325958252;iRNA_PseU:0 2191 chrX 78426748 78426748 1 + C T SKCM 78426748 + 78426728 78426768 41 GGATCTTCTACTACTTGAATCATGACTGGCCATTTGGGCCT GGATCTTCTACTACTTGAATTATGACTGGCCATTTGGGCCT Direct Gain 0 0.96593191936188 0 0.835781216621399 prediction 0.931863838723761 Functional Gain - GPR174 ENSG00000147138 CDS Human protein_coding chrX:78426748 chrX:78426748 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103231 0 0 0 0 0 exosome 0 0.438718535071867 0.671562433242798 0 hPsi_site_2191 iPseU_CNN:0.671562433242798;iRNA_PseU:0 2192 chr1 204939856 204939856 1 + G A OV 204939856 - 204939836 204939876 41 CATTGCAAAGGTTCCCCATTCACCATCCACTGGACAGTGGG CATTGCAAAGGTTCCCCATTTACCATCCACTGGACAGTGGG Direct Gain 0 0.965927154228725 0 0.879365801811218 prediction 0.93185430845745 Functional Gain - NFASC ENSG00000163531 CDS Human protein_coding chr1:204939856 chr1:204939856 synonymous SNV . 0 21 hPsi_associated_SNPs_103232 0 0 0 0 0 exosome 0 0.438706446923735 0.758731603622436 0 hPsi_site_2192 iPseU_CNN:0.758731603622436;iRNA_PseU:0 2193 chr11 5410897 5410897 1 + T A LUSC 5410897 - 5410877 5410917 41 AGATCCCCATAGTGGTGGGCAACGTGGACACACACAGCCCC AGATCCCCATAGTGGTGGGCTACGTGGACACACACAGCCCC Direct Gain 0 0.965900415294093 0 0.996794939041138 prediction 0.931800830588186 Functional Gain - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410897 chr11:5410897 stopgain 0.006 0 21 hPsi_associated_SNPs_103233 0 0 0 0 0 nucleoplasm 0 0.439111325432066 0.993589878082276 0 hPsi_site_2193 iPseU_CNN:0.993589878082276;iRNA_PseU:0 2194 chr12 56622860 56622860 1 + C A OV 56622860 - 56622840 56622880 41 GTGGGAGGGAGTATGAGGGGGATGTGGGCCACCACCGGGAC GTGGGAGGGAGTATGAGGGGTATGTGGGCCACCACCGGGAC Direct Gain 0 0.96589968508321 0 0.000473439693450928 prediction 0.93179937016642 Functional Gain - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622860 chr12:56622860 nonsynonymous SNV 0.047 1 21 hPsi_associated_SNPs_103234 0 0 0 0 0 Ribosome 0 0.437965920485984 0 0 hPsi_site_2194 iPseU_CNN:0;iRNA_PseU:0 2195 chr17 59556101 59556101 1 + G T COAD 59556101 + 59556081 59556121 41 TGCACCCACGTGTTCCCAGAGACCTCCTTCATCTCTGTGAC TGCACCCACGTGTTCCCAGATACCTCCTTCATCTCTGTGAC Direct Gain 0 0.965894366529452 0 0.717667460441589 prediction 0.931788733058903 Functional Gain - TBX4 ENSG00000121075 CDS Human protein_coding chr17:59556101 chr17:59556101 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_103235 0 0 0 0 1 exosome 0 0.438717971694377 0.435334920883178 0 hPsi_site_2195 iPseU_CNN:0.435334920883178;iRNA_PseU:0 2196 chr19 58564894 58564894 1 + G A STAD 58564894 - 58564874 58564914 41 GGACCCTTGGGGCTCGAGATCACAGTCCCTTCTGCCCGCAG GGACCCTTGGGGCTCGAGATTACAGTCCCTTCTGCCCGCAG Direct Gain 0 0.965879636252247 0 0.997981429100037 prediction 0.931759272504493 Functional Gain - ZSCAN1 ENSG00000152467 CDS Human protein_coding chr19:58564894 chr19:58564894 synonymous SNV . 0 21 hPsi_associated_SNPs_103236 0 0 0 0 0 exosome 0 0.438718592995101 0.995962858200074 0 hPsi_site_2196 iPseU_CNN:0.995962858200074;iRNA_PseU:0 2197 chr22 31530073 31530073 1 + C T rs76817205 31530073 + 31530053 31530093 41 GACTGGCCAGGTTCCCTGGGCTTGCCCTACGGCCCTCATCC GACTGGCCAGGTTCCCTGGGTTTGCCCTACGGCCCTCATCC Direct Gain 0 0.965877537883622 0 0.969140291213989 prediction 0.931755075767244 Functional Gain - INPP5J ENSG00000185133 CDS Human protein_coding chr22:31530073 chr22:31530073 nonsynonymous SNV 0.848 1 21 hPsi_associated_SNPs_103237 0 0 0 0 0 Cytosol 0 0.438718592995165 0.938280582427978 0 hPsi_site_2197 iPseU_CNN:0.938280582427978;iRNA_PseU:0 2198 chr6 161470789 161470789 1 + G A UCEC 161470789 - 161470769 161470809 41 TCATCCTCAGATTCGAGCCTCTCAAGCTTCTTGGATATGCA TCATCCTCAGATTCGAGCCTTTCAAGCTTCTTGGATATGCA Direct Gain 0 0.965873883307877 0 0.996200561523438 prediction 0.931747766615754 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470789 chr6:161470789 synonymous SNV . 0 21 hPsi_associated_SNPs_103238 0 0 0 0 0 Cytosol 0 0.438717113496571 0.992401123046876 0 hPsi_site_2198 iPseU_CNN:0.992401123046876;iRNA_PseU:0 2199 chr15 85327895 85327895 1 + G T LUSC 85327895 + 85327875 85327915 41 TCTGCGGACCAAATGTTCGTGTCGGCCCCTGTGAACTCCAC TCTGCGGACCAAATGTTCGTTTCGGCCCCTGTGAACTCCAC Direct Gain 0 0.96586403265461 0 0.999894499778748 prediction 0.931728065309221 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85327895 chr15:85327895 synonymous SNV . 0 21 hPsi_associated_SNPs_103239 0 0 1 0 0 Cytosol 0 0.438739440419531 0.999788999557496 0 hPsi_site_2199 iPseU_CNN:0.999788999557496;iRNA_PseU:0 2200 chr4 123665954 123665954 1 + C T rs186896931 123665954 + 123665934 123665974 41 AGCCAACCTGCAGTATTAACCTCAGTCCTGTCCCCCAAGGT AGCCAACCTGCAGTATTAACTTCAGTCCTGTCCCCCAAGGT Direct Gain 0 0.965863000437173 0 0.483171880245209 prediction 0.931726000874346 Functional Gain - BBS12 ENSG00000181004 UTR3 Human protein_coding chr4:123665954 chr4:123665954 . . 0 21 hPsi_associated_SNPs_103240 0 0 0 0 0 Cytosol 0 0.438608164544398 0 0 hPsi_site_2200 iPseU_CNN:0;iRNA_PseU:0 2201 chr8 68015299 68015299 1 + G A GBM 68015299 - 68015279 68015319 41 CCATCATGTTCCATAGGAGGCATATTCCCTCGTTTGTTCCT CCATCATGTTCCATAGGAGGTATATTCCCTCGTTTGTTCCT Direct Gain 0 0.96585515920877 0 0.0903171598911285 prediction 0.93171031841754 Functional Gain - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68015299 chr8:68015299 nonsynonymous SNV 0.474 0 21 hPsi_associated_SNPs_103241 0 0 0 0 0 Cytosol 0 0.438718532713617 0 0 hPsi_site_2201 iPseU_CNN:0;iRNA_PseU:0 2202 chr15 42107900 42107900 1 + G A BLCA 42107900 - 42107880 42107920 41 GGGATCCAACAGGGATGCATCAGCTTTGTCTCCTCCAGGCA GGGATCCAACAGGGATGCATTAGCTTTGTCTCCTCCAGGCA Direct Gain 0 0.96585044493741 0 0.987645268440247 prediction 0.931700889874819 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42107900 chr15:42107900 nonsynonymous SNV 0.098 3 21 hPsi_associated_SNPs_103242 0 0 0 0 0 Endoplasmic reticulum 0 0.438718583755702 0.975290536880494 0 hPsi_site_2202 iPseU_CNN:0.975290536880494;iRNA_PseU:0 2203 chr9 124441057 124441057 1 + C T LUSC 124441057 + 124441037 124441077 41 GCCGCCACGCCGTTCCGGGTCACGGTAACTATCTCTGCGTC GCCGCCACGCCGTTCCGGGTTACGGTAACTATCTCTGCGTC Direct Gain 0 0.96584705820624 0 0.998892188072205 prediction 0.931694116412479 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124441057 chr9:124441057 synonymous SNV . 0 21 hPsi_associated_SNPs_103243 0 0 1 0 1 Ribosome 0 0.438703805783315 0.99778437614441 0 hPsi_site_2203 iPseU_CNN:0.99778437614441;iRNA_PseU:0 2204 chr1 116184619 116184619 1 + G A rs116216703 116184619 - 116184599 116184639 41 GCGCTGGGCTCCTGGAGAGGCAGAGCCCCGCCGCCGCCGCC GCGCTGGGCTCCTGGAGAGGTAGAGCCCCGCCGCCGCCGCC Direct Gain 0 0.965846758709411 0 0.999998807907104 prediction 0.931693517418822 Functional Gain - VANGL1 ENSG00000173218 UTR5 Human protein_coding chr1:116184619 chr1:116184619 . . 0 21 hPsi_associated_SNPs_103244 0 0 0 0 0 Ribosome 0 0.438742510337538 0.999997615814208 0 hPsi_site_2204 iPseU_CNN:0.999997615814208;iRNA_PseU:0 2205 chr14 88477333 88477333 1 + G A LUSC 88477333 - 88477313 88477353 41 GAAGAGGTAAATTCCTAGTTCACTTTCCTTCTTTGCTTGCA GAAGAGGTAAATTCCTAGTTTACTTTCCTTCTTTGCTTGCA Direct Gain 0 0.965837650293929 0 0.999592304229736 prediction 0.931675300587858 Functional Gain - GPR65 ENSG00000140030 CDS Human protein_coding chr14:88477333 chr14:88477333 nonsynonymous SNV 0.990 4 21 hPsi_associated_SNPs_103245 0 0 0 0 0 exosome 0 0.438692877915616 0.999184608459472 0 hPsi_site_2205 iPseU_CNN:0.999184608459472;iRNA_PseU:0 2206 chr15 90255298 90255298 1 + C A STAD 90255298 - 90255278 90255318 41 GCAAAGTCCCCTCCTTGAGAGATCTCCATCTTTATACAGGT GCAAAGTCCCCTCCTTGAGATATCTCCATCTTTATACAGGT Direct Gain 0 0.965835310096685 0 0.806303024291992 prediction 0.93167062019337 Functional Gain - WDR93 ENSG00000140527 CDS Human protein_coding chr15:90255298 chr15:90255298 synonymous SNV . 0 21 hPsi_associated_SNPs_103246 0 0 0 0 0 exosome 0 0.438655994017137 0.612606048583984 0 hPsi_site_2206 iPseU_CNN:0.612606048583984;iRNA_PseU:0 2207 chr19 41596395 41596395 1 + G A rs151080412 41596395 - 41596375 41596415 41 TGACAGGAACTCTTTGTCCTCATAGTCAAAGCGGTCCCCAA TGACAGGAACTCTTTGTCCTTATAGTCAAAGCGGTCCCCAA Direct Gain 0 0.965831336848161 0 0.999875783920288 prediction 0.931662673696322 Functional Gain - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41596395 chr19:41596395 nonsynonymous SNV 0.984 0 21 hPsi_associated_SNPs_103247 0 0 0 0 0 unknown 0 0.40694883249976 0.999751567840576 0 hPsi_site_2207 iPseU_CNN:0.999751567840576;iRNA_PseU:0 2208 chr6 31807367 31807367 1 + G A COAD 31807367 - 31807347 31807387 41 ATACAGGAAAGTTGTAAGTTCTTAGGATATGCCCAGCACCA ATACAGGAAAGTTGTAAGTTTTTAGGATATGCCCAGCACCA Direct Gain 0 0.965809193959872 0 0.57821387052536 prediction 0.931618387919743 Functional Gain - C6orf48 ENSG00000204387 CDS Human protein_coding chr6:31807367 chr6:31807367 nonsynonymous SNV 0.019 0 21 hPsi_associated_SNPs_103248 0 0 0 0 0 Ribosome 0 0.439377802930284 0.15642774105072 0 hPsi_site_2208 iPseU_CNN:0.15642774105072;iRNA_PseU:0 2209 chr1 35852772 35852772 1 + C T LIHC 35852772 + 35852752 35852792 41 CTGCAGCTGGTCTCCAGCGTCTCGCTGCCCAGTCCCAGCAT CTGCAGCTGGTCTCCAGCGTTTCGCTGCCCAGTCCCAGCAT Direct Gain 0 0.965804664517872 0 0.424098134040833 prediction 0.931609329035744 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35852772 chr1:35852772 nonsynonymous SNV 0.212 2 21 hPsi_associated_SNPs_103249 0 0 1 0 0 Cytosol 0 0.431557558240453 0 0 hPsi_site_2209 iPseU_CNN:0;iRNA_PseU:0 2210 chr16 90162030 90162030 1 + G A HNSC 90162030 - 90162010 90162050 41 CGGGGAAACGGGACCATGTTCACGGCCAGCTTCCTCAGGTC CGGGGAAACGGGACCATGTTTACGGCCAGCTTCCTCAGGTC Direct Gain 0 0.96580214919132 0 0.924273610115051 prediction 0.931604298382639 Functional Gain - PRDM7;FAM157B ENSG00000261812 CDS Human transcribed_unprocessed_pseudogene chr16:90162030 chr16:90162030 unknown . 0 21 hPsi_associated_SNPs_103250 0 0 0 0 0 unknown 0 0.43871857234092 0.848547220230102 0 hPsi_site_2210 iPseU_CNN:0.848547220230102;iRNA_PseU:0 2211 chr17 4624301 4624301 1 + G A LUAD 4624301 - 4624281 4624321 41 TCATCATAGTCGTCATCCTTCATCCCCTTCAGCCGAAGCCG TCATCATAGTCGTCATCCTTTATCCCCTTCAGCCGAAGCCG Direct Gain 0 0.965799783921279 0 0.99996817111969 prediction 0.931599567842557 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4624301 chr17:4624301 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103251 0 0 0 0 0 Cytosol 0 0.438719029941041 0.99993634223938 0 hPsi_site_2211 iPseU_CNN:0.99993634223938;iRNA_PseU:0 2212 chr9 20926369 20926369 1 + G T LIHC 20926369 + 20926349 20926389 41 ATACACTCTTGGTCATTGTGGATAGCCATTACCAACCCAGA ATACACTCTTGGTCATTGTGTATAGCCATTACCAACCCAGA Direct Gain 0 0.965784506254758 0 0.998815417289734 prediction 0.931569012509517 Functional Gain - FOCAD ENSG00000188352 CDS Human protein_coding chr9:20926369 chr9:20926369 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103252 0 0 0 0 2 Ribosome 0 0.438717784918768 0.997630834579468 0 hPsi_site_2212 iPseU_CNN:0.997630834579468;iRNA_PseU:0 2213 chr20 57767569 57767569 1 + G A LUAD 57767569 - 57767549 57767589 41 GTTGCTCCTGGTGACGGGGACACATTCCACGGTGGTGGAGA GTTGCTCCTGGTGACGGGGATACATTCCACGGTGGTGGAGA Direct Gain 0 0.965763696718138 0 0.999992370605469 prediction 0.931527393436276 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767569 chr20:57767569 nonsynonymous SNV 0.652 1 21 hPsi_associated_SNPs_103253 0 0 0 0 0 exosome 0 0.405310557712089 0.999984741210938 0 hPsi_site_2213 iPseU_CNN:0.999984741210938;iRNA_PseU:0 2214 chr6 79607920 79607920 1 + C A SKCM 79607920 - 79607900 79607940 41 TGAGAGTCTGGATGACTGGTGATCATCTATTTGGCCTTCCC TGAGAGTCTGGATGACTGGTTATCATCTATTTGGCCTTCCC Direct Gain 0 0.965744352849719 0 0.998053789138794 prediction 0.931488705699438 Functional Gain - IRAK1BP1 ENSG00000146243 CDS Human protein_coding chr6:79607920 chr6:79607920 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_103254 0 0 0 0 0 cytosol 0 0.438329804430913 0.996107578277588 0 hPsi_site_2214 iPseU_CNN:0.996107578277588;iRNA_PseU:0 2215 chr20 33507304 33507304 1 + G A rs111590432 33507304 - 33507284 33507324 41 GGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTT GGCATCACACCACTCGGGCTTACACTCATCCCCTGCCTCTT Direct Gain 0 0.965735183403522 0 0.791437983512878 prediction 0.931470366807044 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33507304 chr20:33507304 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103255 0 0 0 0 0 Ribosome 0 0.438222304143335 0.582875967025756 0 hPsi_site_2215 iPseU_CNN:0.582875967025756;iRNA_PseU:0 2216 chr1 160784365 160784365 1 + G A UCEC 160784365 - 160784345 160784385 41 GAGTGGATCTGCCGTTGCTGCTTCTTCCCTCTCTTTGCTAA GAGTGGATCTGCCGTTGCTGTTTCTTCCCTCTCTTTGCTAA Direct Gain 0 0.96573074482199 0 0.0018925666809082 prediction 0.93146148964398 Functional Gain - LY9 ENSG00000122224 CDS Human protein_coding chr1:160784365 chr1:160784365 nonsynonymous SNV 0.003 2 21 hPsi_associated_SNPs_103256 0 0 0 0 0 exosome 0 0.43871859871 0 0 hPsi_site_2216 iPseU_CNN:0;iRNA_PseU:0 2217 chr11 60150658 60150658 1 + C A LUSC 60150658 - 60150638 60150678 41 GGATAGTGATGCCCTTTGGTGTAAAGCTGTGAGAAACCCCC GGATAGTGATGCCCTTTGGTTTAAAGCTGTGAGAAACCCCC Direct Gain 0 0.965728674438887 0 0.941929876804352 prediction 0.931457348877774 Functional Gain - MS4A7 ENSG00000166927 CDS Human protein_coding chr11:60150658 chr11:60150658 nonsynonymous SNV 0.038 2 21 hPsi_associated_SNPs_103257 0 0 0 0 0 Cytosol 0 0.438718591599053 0.883859753608704 0 hPsi_site_2217 iPseU_CNN:0.883859753608704;iRNA_PseU:0 2218 chr12 113496033 113496033 1 + G A SKCM 113496033 - 113496013 113496053 41 GGTGGGAAGCCCAGACCATTCACAGGCATCAGCCCACCGTG GGTGGGAAGCCCAGACCATTTACAGGCATCAGCCCACCGTG Direct Gain 0 0.965721842690621 0 0.999992489814758 prediction 0.931443685381241 Functional Gain - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113496033 chr12:113496033 synonymous SNV . 0 21 hPsi_associated_SNPs_103258 0 0 0 0 0 Endoplasmic reticulum 0 0.438720930764105 0.999984979629516 0 hPsi_site_2218 iPseU_CNN:0.999984979629516;iRNA_PseU:0 2219 chr22 38151586 38151586 1 + C T LUAD 38151586 + 38151566 38151606 41 GCTGTCTATACCTTGTCGGCCATGACCTCAGGCATCCGGCG GCTGTCTATACCTTGTCGGCTATGACCTCAGGCATCCGGCG Direct Gain 0 0.965715270333563 0 0.764784157276154 prediction 0.931430540667127 Functional Gain - TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38151586 chr22:38151586 synonymous SNV . 0 21 hPsi_associated_SNPs_103259 0 0 0 0 2 Ribosome 0 0.438718737495706 0.529568314552308 0 hPsi_site_2219 iPseU_CNN:0.529568314552308;iRNA_PseU:0 2220 chr17 7911271 7911271 1 + G A LUSC 7911271 - 7911251 7911291 41 ACATGCTGCGGGCACCCAGACTTGATCGACTCCCCTGGGCC ACATGCTGCGGGCACCCAGATTTGATCGACTCCCCTGGGCC Direct Gain 0 0.965710154365759 0 0.99880576133728 prediction 0.931420308731518 Functional Gain - GUCY2D ENSG00000132518 CDS Human protein_coding chr17:7911271 chr17:7911271 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_103260 0 0 0 0 0 exosome 0 0.438717449568925 0.99761152267456 0 hPsi_site_2220 iPseU_CNN:0.99761152267456;iRNA_PseU:0 2221 chr3 39170331 39170331 1 + G A OV 39170331 - 39170311 39170351 41 GGGCCTGAGGAACTTTCTGCCTTCTTCCTTCTTCAGAGCTG GGGCCTGAGGAACTTTCTGCTTTCTTCCTTCTTCAGAGCTG Direct Gain 0 0.965684116419494 0 0.999064326286316 prediction 0.931368232838988 Functional Gain - TTC21A ENSG00000168026 CDS Human protein_coding chr3:39170331 chr3:39170331 nonsynonymous SNV 0.072 0 21 hPsi_associated_SNPs_103261 0 0 0 0 0 nucleus 0 0.4387189519354 0.998128652572632 0 hPsi_site_2221 iPseU_CNN:0.998128652572632;iRNA_PseU:0 2222 chr3 11406175 11406175 1 + G A UCEC 11406175 - 11406155 11406195 41 AGCCCAAGAGAGGTTGGAGGCTCATTCATCCGATCGTCACT AGCCCAAGAGAGGTTGGAGGTTCATTCATCCGATCGTCACT Direct Gain 0 0.96567358701388 0 0.893286228179932 prediction 0.93134717402776 Functional Gain - ATG7 ENSG00000197548 CDS Human protein_coding chr3:11406175 chr3:11406175 synonymous SNV . 0 21 hPsi_associated_SNPs_103262 0 0 0 0 0 Cytosol 0 0.438718719335343 0.786572456359864 0 hPsi_site_2222 iPseU_CNN:0.786572456359864;iRNA_PseU:0 2223 chr12 65847548 65847548 1 + C T SKCM 65847548 + 65847528 65847568 41 GTGATCAATTCTGAGGCAATCACATTCACAGATGACTTTTC GTGATCAATTCTGAGGCAATTACATTCACAGATGACTTTTC Direct Gain 0 0.965667417361449 0 0.997027993202209 prediction 0.931334834722898 Functional Gain - MSRB3 ENSG00000174099 CDS Human protein_coding chr12:65847548 chr12:65847548 synonymous SNV . 0 21 hPsi_associated_SNPs_103263 0 0 1 0 2 Nucleus 0 0.435400296174747 0.994055986404418 0 hPsi_site_2223 iPseU_CNN:0.994055986404418;iRNA_PseU:0 2224 chrX 70516721 70516721 1 + G T COAD 70516721 + 70516701 70516741 41 GGAACGAGAGCAGCCACCCAGATTTGCACAGCCTGGCTCCT GGAACGAGAGCAGCCACCCATATTTGCACAGCCTGGCTCCT Direct Gain 0 0.965654019996763 0 0.465218722820282 prediction 0.931308039993526 Functional Gain - NONO ENSG00000147140 CDS Human protein_coding chrX:70516721 chrX:70516721 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103264 0 0 1 0 1 Nucleus 0 0.438718483005899 0 0 hPsi_site_2224 iPseU_CNN:0;iRNA_PseU:0 2225 chr6 38893864 38893864 1 + G T LGG 38893864 + 38893844 38893884 41 GGCTACAGGGATTACCAGGAGATGATCTCTCAATTCAGAAT GGCTACAGGGATTACCAGGATATGATCTCTCAATTCAGAAT Direct Gain 0 0.965652677789317 0 0.724627614021301 prediction 0.931305355578633 Functional Gain - DNAH8 ENSG00000124721 CDS Human protein_coding chr6:38893864 chr6:38893864 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103265 0 0 0 0 1 chromatin 0 0.438718732774307 0.449255228042602 0 hPsi_site_2225 iPseU_CNN:0.449255228042602;iRNA_PseU:0 2226 chr9 100194500 100194500 1 + G A rs149804703 100194500 - 100194480 100194520 41 CTGTTGTTGGTGGACATGGTCACATGCCTTTGCACTGGAAT CTGTTGTTGGTGGACATGGTTACATGCCTTTGCACTGGAAT Direct Gain 0 0.965633431672416 0 0.997286915779114 prediction 0.931266863344833 Functional Gain - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100194500 chr9:100194500 synonymous SNV . 0 21 hPsi_associated_SNPs_103266 0 0 0 0 0 Ribosome 0 0.436177611054461 0.994573831558228 0 hPsi_site_2226 iPseU_CNN:0.994573831558228;iRNA_PseU:0 2227 chr2 233674471 233674471 1 + C T rs149837608 233674471 + 233674451 233674491 41 CTGACCAGGCAGCAAGAACTCACAGCCTTATACCAGATGCA CTGACCAGGCAGCAAGAACTTACAGCCTTATACCAGATGCA Direct Gain 0 0.965625695568265 0 0.99999988079071 prediction 0.931251391136531 Functional Gain - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233674471 chr2:233674471 synonymous SNV . 0 21 hPsi_associated_SNPs_103267 0 0 1 0 2 Nucleus 0 0.438712867375969 0.99999976158142 0 hPsi_site_2227 iPseU_CNN:0.99999976158142;iRNA_PseU:0 2228 chr19 55220797 55220797 1 + G A rs560881952 55220797 - 55220777 55220817 41 AGGAGAGAAGGAGACACTGTCTTAAATGGGGCTCACGCGTC AGGAGAGAAGGAGACACTGTTTTAAATGGGGCTCACGCGTC Direct Gain 0 0.965622213091918 0 0.997059404850006 prediction 0.931244426183836 Functional Gain - LILRP2 ENSG00000170858 ncRNA_intronic Human transcribed_processed_pseudogene chr19:55220797 chr19:55220797 . . 0 21 hPsi_associated_SNPs_103268 0 0 0 0 0 unknown 0 0.438718572911795 0.994118809700012 0 hPsi_site_2228 iPseU_CNN:0.994118809700012;iRNA_PseU:0 2229 chr5 150639438 150639438 1 + C T SARC 150639438 + 150639418 150639458 41 GGAAATGTGACCCTCAGTGTCATGGGCAGCACCAGTGTCCC GGAAATGTGACCCTCAGTGTTATGGGCAGCACCAGTGTCCC Direct Gain 0 0.965620550043602 0 0.856884300708771 prediction 0.931241100087204 Functional Gain - GM2A ENSG00000196743 CDS Human protein_coding chr5:150639438 chr5:150639438 synonymous SNV . 0 21 hPsi_associated_SNPs_103269 0 0 1 0 1 Endoplasmic reticulum 0 0.438782058014227 0.713768601417542 0 hPsi_site_2229 iPseU_CNN:0.713768601417542;iRNA_PseU:0 2230 chr15 25494412 25494412 1 + A T SKCM 25494412 + 25494392 25494432 41 TAAAAATCATGCTCAATAGGATTACGCTGAGGCCCAGGCTA TAAAAATCATGCTCAATAGGTTTACGCTGAGGCCCAGGCTA Direct Gain 0 0.965620232339282 0 0.267593801021576 prediction 0.931240464678565 Functional Gain - SNORD115-11;SNORD115-29;SNORD115-36;SNORD115-43 ENSG00000202373 ncRNA_exonic Human snoRNA chr15:25494412 chr15:25494412 . . 0 21 hPsi_associated_SNPs_103270 0 0 0 0 0 unknown 0 0.438718297600835 0 0 hPsi_site_2230 iPseU_CNN:0;iRNA_PseU:0 2231 chr1 227935545 227935545 1 + C T UCEC 227935545 + 227935525 227935565 41 ACATCGCTGTCGCTCAGGTTCATGACTGACAGCACTGGAGA ACATCGCTGTCGCTCAGGTTTATGACTGACAGCACTGGAGA Direct Gain 0 0.965616534267082 0 0.898633122444153 prediction 0.931233068534164 Functional Gain - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227935545 chr1:227935545 synonymous SNV . 0 21 hPsi_associated_SNPs_103271 0 0 1 0 0 Ribosome 0 0.436942275480237 0.797266244888306 0 hPsi_site_2231 iPseU_CNN:0.797266244888306;iRNA_PseU:0 2232 chr2 179404278 179404278 1 + C T COAD 179404278 + 179404258 179404298 41 GTATACCAGGCGGCTTTAGGCACTTCTCGTCTCTCGAGGAT GTATACCAGGCGGCTTTAGGTACTTCTCGTCTCTCGAGGAT Direct Gain 0 0.965609342903141 0 0.999999940395355 prediction 0.931218685806282 Functional Gain - TTN ENSG00000155657 CDS Human protein_coding chr2:179404278 chr2:179404278 synonymous SNV . 0 21 hPsi_associated_SNPs_103272 0 0 1 0 0 Nucleus 0 0.438741882844647 0.99999988079071 0 hPsi_site_2232 iPseU_CNN:0.99999988079071;iRNA_PseU:0 2233 chr7 37780424 37780424 1 + G T LIHC 37780424 + 37780404 37780444 41 GCTGGCATGTGGACGCTGGTGATTGTCATTGTGGTACCCCT GCTGGCATGTGGACGCTGGTTATTGTCATTGTGGTACCCCT Direct Gain 0 0.965605464648424 0 0.859728753566742 prediction 0.931210929296848 Functional Gain - GPR141 ENSG00000187037 CDS Human protein_coding chr7:37780424 chr7:37780424 synonymous SNV . 0 21 hPsi_associated_SNPs_103273 0 0 0 0 0 exosome 0 0.436989711402254 0.719457507133484 0 hPsi_site_2233 iPseU_CNN:0.719457507133484;iRNA_PseU:0 2234 chr22 21800972 21800972 1 + C T SKCM 21800972 + 21800952 21800992 41 GAGTGCCAGCTGTGCGGGGGCAAGTTCACCCAGCAGCGCAA GAGTGCCAGCTGTGCGGGGGTAAGTTCACCCAGCAGCGCAA Direct Gain 0 0.9656053293695 0 0.999268889427185 prediction 0.931210658739 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800972 chr22:21800972 synonymous SNV . 0 21 hPsi_associated_SNPs_103274 0 0 1 0 0 chromatin 0 0.438932888831955 0.99853777885437 0 hPsi_site_2234 iPseU_CNN:0.99853777885437;iRNA_PseU:0 2235 chr6 25727328 25727328 1 + G A SKCM 25727328 - 25727308 25727348 41 ATATCAGTGACGAAGGAATTCATAATGCTCATAGCTTTCGA ATATCAGTGACGAAGGAATTTATAATGCTCATAGCTTTCGA Direct Gain 0 0.965599228673875 0 0.998717963695526 prediction 0.93119845734775 Functional Gain - HIST1H2BA ENSG00000146047 CDS Human protein_coding chr6:25727328 chr6:25727328 nonsynonymous SNV 0.097 2 21 hPsi_associated_SNPs_103275 0 0 0 0 0 Cytosol 0 0.438712509282646 0.997435927391052 0 hPsi_site_2235 iPseU_CNN:0.997435927391052;iRNA_PseU:0 2236 chr6 7581076 7581076 1 + G A BLCA 7581076 - 7581056 7581096 41 CGCGTGATATCCTGGTCCTTCACAGTCCTCTCCTGGGAAAC CGCGTGATATCCTGGTCCTTTACAGTCCTCTCCTGGGAAAC Direct Gain 0 0.965597187348977 0 0.999890804290771 prediction 0.931194374697955 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7581076 chr6:7581076 synonymous SNV . 0 21 hPsi_associated_SNPs_103276 0 0 0 0 0 Nucleus 0 0.438718353202593 0.999781608581542 0 hPsi_site_2236 iPseU_CNN:0.999781608581542;iRNA_PseU:0 2237 chr14 20344709 20344709 1 + G T UCEC 20344709 + 20344689 20344729 41 GTCACAAAACCATCTCTTTTGATGGCTGCCTTACCCAGATA GTCACAAAACCATCTCTTTTTATGGCTGCCTTACCCAGATA Direct Gain 0 0.965582581457608 0 0.999509334564209 prediction 0.931165162915215 Functional Gain - OR4K2 ENSG00000165762 CDS Human protein_coding chr14:20344709 chr14:20344709 nonsynonymous SNV 0.202 1 21 hPsi_associated_SNPs_103277 0 0 0 0 0 unknown 0 0.438719042947892 0.999018669128418 0 hPsi_site_2237 iPseU_CNN:0.999018669128418;iRNA_PseU:0 2238 chr12 64173797 64173797 1 + C T LUAD 64173797 + 64173777 64173817 41 ATCGCCCTGTACTGCCTATTCTCCCTCTACGCTGCCTACCA ATCGCCCTGTACTGCCTATTTTCCCTCTACGCTGCCTACCA Direct Gain 0 0.965581188002337 0 0.979214191436768 prediction 0.931162376004675 Functional Gain - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173797 chr12:64173797 synonymous SNV . 0 21 hPsi_associated_SNPs_103278 0 0 1 0 0 Endoplasmic reticulum 0 0.438719829242079 0.958428382873536 0 hPsi_site_2238 iPseU_CNN:0.958428382873536;iRNA_PseU:0 2239 chr6 129714251 129714251 1 + G A SKCM 129714251 - 129714231 129714271 41 GAGATCCTTCTCCATTTCTTCATTTTCCCCCCGGGACTCTC GAGATCCTTCTCCATTTCTTTATTTTCCCCCCGGGACTCTC Direct Gain 0 0.965574669768417 0 0.996838212013245 prediction 0.931149339536834 Functional Gain - LAMA2 ENSG00000196569 CDS Human protein_coding chr6:129714251 chr6:129714251 nonsynonymous SNV 0.067 3 21 hPsi_associated_SNPs_103279 0 0 0 0 0 cytosol 0 0.438718647582441 0.99367642402649 0 hPsi_site_2239 iPseU_CNN:0.99367642402649;iRNA_PseU:0 2240 chr1 22915416 22915416 1 + G A OV 22915416 - 22915396 22915436 41 GGAGGGGCCCACTCCAGAGTCACTGATGTCCCATTCACACT GGAGGGGCCCACTCCAGAGTTACTGATGTCCCATTCACACT Direct Gain 0 0.965560101600908 0 0.989502191543579 prediction 0.931120203201816 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22915416 chr1:22915416 synonymous SNV . 0 21 hPsi_associated_SNPs_103280 0 0 0 0 0 exosome 0 0.438717045483895 0.979004383087158 0 hPsi_site_2240 iPseU_CNN:0.979004383087158;iRNA_PseU:0 2241 chr11 101870516 101870516 1 + G A rs541382430 101870516 - 101870496 101870536 41 CAAAGTGCTAGAATTACATGCATGAGCCACTGTGTCTGGCC CAAAGTGCTAGAATTACATGTATGAGCCACTGTGTCTGGCC Direct Gain 0 0.965553307650679 0 0.999387383460999 prediction 0.931106615301359 Functional Gain - CEP126 ENSG00000110318 UTR3 Human protein_coding chr11:101870516 chr11:101870516 . . 0 21 hPsi_associated_SNPs_103281 0 0 0 0 0 exosome 0 0.438768264305737 0.998774766921998 0 hPsi_site_2241 iPseU_CNN:0.998774766921998;iRNA_PseU:0 2242 chr20 62319356 62319356 1 + C A rs116057134 62319356 - 62319336 62319376 41 GCTCCATCGGGGCCTCTGGGGACGACCCCCACCCAGATCTG GCTCCATCGGGGCCTCTGGGTACGACCCCCACCCAGATCTG Direct Gain 0 0.96552930789139 0 0.999837577342987 prediction 0.931058615782779 Functional Gain - RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62319356 chr20:62319356 synonymous SNV . 0 21 hPsi_associated_SNPs_103282 0 0 0 0 0 chromatin 0 0.438851846068448 0.999675154685974 0 hPsi_site_2242 iPseU_CNN:0.999675154685974;iRNA_PseU:0 2243 chr19 10791742 10791742 1 + C T LIHC 10791742 + 10791722 10791762 41 CAGCTCCATAAAGTCCTAGGCATGGACCCTCTGCCTTCCAA CAGCTCCATAAAGTCCTAGGTATGGACCCTCTGCCTTCCAA Direct Gain 0 0.965526670810884 0 0.999012231826782 prediction 0.931053341621768 Functional Gain - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10791742 chr19:10791742 synonymous SNV . 0 21 hPsi_associated_SNPs_103283 0 0 1 0 2 Cytosol 0 0.438718593557897 0.998024463653564 0 hPsi_site_2243 iPseU_CNN:0.998024463653564;iRNA_PseU:0 2244 chr12 51072628 51072628 1 + G A BLCA 51072628 - 51072608 51072648 41 GTGTAAACTGGTTTCCCTGTCATGTCCAGTGCAGTCAGACA GTGTAAACTGGTTTCCCTGTTATGTCCAGTGCAGTCAGACA Direct Gain 0 0.965526529303567 0 0.99815434217453 prediction 0.931053058607133 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51072628 chr12:51072628 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103284 0 0 0 0 0 Nucleus 0 0.437110880337215 0.99630868434906 0 hPsi_site_2244 iPseU_CNN:0.99630868434906;iRNA_PseU:0 2245 chrX 10106775 10106775 1 + C T BLCA 10106775 + 10106755 10106795 41 AGGTCTTCCCTGGCTGAGCTCATGGCCCGCACCTCCCTGGA AGGTCTTCCCTGGCTGAGCTTATGGCCCGCACCTCCCTGGA Direct Gain 0 0.965524153362762 0 0.992036819458008 prediction 0.931048306725523 Functional Gain - WWC3 ENSG00000047644 CDS Human protein_coding chrX:10106775 chrX:10106775 synonymous SNV . 0 21 hPsi_associated_SNPs_103285 0 0 0 0 1 Nucleus 0 0.437402487779434 0.984073638916016 0 hPsi_site_2245 iPseU_CNN:0.984073638916016;iRNA_PseU:0 2246 chr8 145095792 145095792 1 + C A STAD 145095792 - 145095772 145095812 41 ATTATGCATTCGGGAAGGGGGATGGGGGGCACCCTGGGCGA ATTATGCATTCGGGAAGGGGTATGGGGGGCACCCTGGGCGA Direct Gain 0 0.965510335253827 0 0.940543651580811 prediction 0.931020670507654 Functional Gain - SPATC1 ENSG00000186583 CDS Human protein_coding chr8:145095792 chr8:145095792 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_103286 0 0 0 0 0 chromatin 0 0.43871859299509 0.881087303161622 0 hPsi_site_2246 iPseU_CNN:0.881087303161622;iRNA_PseU:0 2247 chr22 31487380 31487380 1 + G T LUSC 31487380 + 31487360 31487400 41 GCCGAGCCAGGGGGCAGTATGAAGACCACATTCACCATCGA GCCGAGCCAGGGGGCAGTATTAAGACCACATTCACCATCGA Direct Gain 0 0.965509872251357 0 0.999835431575775 prediction 0.931019744502714 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31487380 chr22:31487380 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103287 0 0 1 0 1 Cytosol 0 0.438718715469489 0.99967086315155 0 hPsi_site_2247 iPseU_CNN:0.99967086315155;iRNA_PseU:0 2248 chr12 126138621 126138621 1 + G A UCEC 126138621 - 126138601 126138641 41 AGTGGGGAAGCTTGTAAAGGCATCTGGACCACCACTTTTGA AGTGGGGAAGCTTGTAAAGGTATCTGGACCACCACTTTTGA Direct Gain 0 0.965501854126675 0 0.413860023021698 prediction 0.93100370825335 Functional Gain - TMEM132B ENSG00000139364 CDS Human protein_coding chr12:126138621 chr12:126138621 nonsynonymous SNV 0.974 0 21 hPsi_associated_SNPs_103288 0 0 0 0 0 exosome 0 0.438718593238574 0 0 hPsi_site_2248 iPseU_CNN:0;iRNA_PseU:0 2249 chr11 51515422 51515422 1 + C A OV 51515422 - 51515402 51515442 41 CCCAGTGATGGGCTGGCAGTGATGGTGACCACAATGAGCAC CCCAGTGATGGGCTGGCAGTTATGGTGACCACAATGAGCAC Direct Gain 0 0.965493475392752 0 0.999980628490448 prediction 0.930986950785504 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515422 chr11:51515422 synonymous SNV . 0 21 hPsi_associated_SNPs_103289 0 0 0 0 0 unknown 0 0.433765181584778 0.999961256980896 0 hPsi_site_2249 iPseU_CNN:0.999961256980896;iRNA_PseU:0 2250 chr8 134225290 134225290 1 + G T ESCA 134225290 + 134225270 134225310 41 TGTGCGCTCAGCAGCTTGGGGACAACTGCACGGAGGCTGCC TGTGCGCTCAGCAGCTTGGGTACAACTGCACGGAGGCTGCC Direct Gain 0 0.96549063205982 0 0.999395489692688 prediction 0.93098126411964 Functional Gain - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134225290 chr8:134225290 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103290 0 0 0 0 2 nucleus 0 0.44172461303188 0.998790979385376 0 hPsi_site_2250 iPseU_CNN:0.998790979385376;iRNA_PseU:0 2251 chr2 69304567 69304567 1 + C T CESC 69304567 + 69304547 69304587 41 GGATTGCGGACAGTAAGGATCATGTGTTTCCCGTGAATGAC GGATTGCGGACAGTAAGGATTATGTGTTTCCCGTGAATGAC Direct Gain 0 0.965477682985805 0 0.458261251449585 prediction 0.930955365971609 Functional Gain - ANTXR1 ENSG00000169604 CDS Human protein_coding chr2:69304567 chr2:69304567 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_103291 0 0 0 0 2 Endoplasmic reticulum 0 0.438575770788576 0 0 hPsi_site_2251 iPseU_CNN:0;iRNA_PseU:0 2252 chr6 144808816 144808816 1 + G A SARC 144808816 - 144808796 144808836 41 TACCAGGTGACTTAGATCTTCATATCGGCTGTTGAAAGCCT TACCAGGTGACTTAGATCTTTATATCGGCTGTTGAAAGCCT Direct Gain 0 0.965470429483552 0 0.160731315612793 prediction 0.930940858967104 Functional Gain - UTRN ENSG00000152818 CDS Human protein_coding chr6:144808816 chr6:144808816 nonsynonymous SNV 0.436 1 21 hPsi_associated_SNPs_103292 0 0 0 0 0 Nucleus 0 0.438715954968302 0 0 hPsi_site_2252 iPseU_CNN:0;iRNA_PseU:0 2253 chr3 29628625 29628625 1 + G T LUSC 29628625 + 29628605 29628645 41 GTTATGGTTTTGTAGATTTTGACAGTCCTGCAGCCGCACAG GTTATGGTTTTGTAGATTTTTACAGTCCTGCAGCCGCACAG Direct Gain 0 0.9654678463845 0 0.756163358688354 prediction 0.930935692769 Functional Gain - RBMS3 ENSG00000144642 CDS Human protein_coding chr3:29628625 chr3:29628625 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103293 0 0 0 0 2 Endoplasmic reticulum 0 0.438727760553146 0.512326717376708 0 hPsi_site_2253 iPseU_CNN:0.512326717376708;iRNA_PseU:0 2254 chr9 111625641 111625641 1 + G A STAD 111625641 - 111625621 111625661 41 GTCCCGTTTGAGGGCGATGTCACACTTGTTAAGGCAGGACA GTCCCGTTTGAGGGCGATGTTACACTTGTTAAGGCAGGACA Direct Gain 0 0.965465428365231 0 0.0225143432617188 prediction 0.930930856730462 Functional Gain - ACTL7A ENSG00000187003 CDS Human protein_coding chr9:111625641 chr9:111625641 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_103294 0 0 0 0 0 unknown 0 0.438717841110513 0 0 hPsi_site_2254 iPseU_CNN:0;iRNA_PseU:0 2255 chr20 56137915 56137915 1 + C T LUAD 56137915 + 56137895 56137935 41 GTGGGCGATGGGGAGTTTGTCAAATGCCTCCATTCTGTGGG GTGGGCGATGGGGAGTTTGTTAAATGCCTCCATTCTGTGGG Direct Gain 0 0.965464093652442 0 0.999999582767487 prediction 0.930928187304885 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56137915 chr20:56137915 synonymous SNV . 0 21 hPsi_associated_SNPs_103295 0 0 0 0 1 exosome 0 0.438885208071156 0.999999165534974 0 hPsi_site_2255 iPseU_CNN:0.999999165534974;iRNA_PseU:0 2256 chr9 79117323 79117323 1 + G T BLCA 79117323 + 79117303 79117343 41 GAGGACGTTGCTGCGAAGGAGACTTTTTTCTTATCCCACCA GAGGACGTTGCTGCGAAGGATACTTTTTTCTTATCCCACCA Direct Gain 0 0.965444020289217 0 0.99999988079071 prediction 0.930888040578434 Functional Gain - GCNT1 ENSG00000187210 CDS Human protein_coding chr9:79117323 chr9:79117323 nonsynonymous SNV 0.980 1 21 hPsi_associated_SNPs_103296 0 0 1 0 0 exosome 0 0.438716416145035 0.99999976158142 0 hPsi_site_2256 iPseU_CNN:0.99999976158142;iRNA_PseU:0 2257 chr3 75679929 75679929 1 + G A BLCA 75679929 - 75679909 75679949 41 GTGAGGGCAGGACCAGGCTTCATGCACCTCTTCAGGAATGT GTGAGGGCAGGACCAGGCTTTATGCACCTCTTCAGGAATGT Direct Gain 0 0.965438446099941 0 0.985133528709412 prediction 0.930876892199882 Functional Gain - MIR1324 ENSG00000221795 ncRNA_exonic Human other chr3:75679929 chr3:75679929 . . 0 21 hPsi_associated_SNPs_103297 0 0 0 0 0 unknown 0 0.438779807157601 0.970267057418824 0 hPsi_site_2257 iPseU_CNN:0.970267057418824;iRNA_PseU:0 2258 chr12 51090911 51090911 1 + C A BLCA 51090911 - 51090891 51090931 41 GCAGACGTGGCGCACGGACAGATGGCCTCAGGCTTCAGTCC GCAGACGTGGCGCACGGACATATGGCCTCAGGCTTCAGTCC Direct Gain 0 0.965436854633514 0 0.372459948062897 prediction 0.930873709267028 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51090911 chr12:51090911 synonymous SNV . 0 21 hPsi_associated_SNPs_103298 0 0 0 0 0 Nucleus 0 0.438723553176695 0 0 hPsi_site_2258 iPseU_CNN:0;iRNA_PseU:0 2259 chr3 38039054 38039054 1 + C T UCEC 38039054 + 38039034 38039074 41 GGTGTGGTGGATGATGAGGCCAAAGCCCCGGACCTCATGCA GGTGTGGTGGATGATGAGGCTAAAGCCCCGGACCTCATGCA Direct Gain 0 0.965434208856558 0 0.982566952705383 prediction 0.930868417713117 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38039054 chr3:38039054 synonymous SNV . 0 21 hPsi_associated_SNPs_103299 0 0 0 0 1 chromatin 0 0.438710181664262 0.965133905410766 0 hPsi_site_2259 iPseU_CNN:0.965133905410766;iRNA_PseU:0 2260 chr22 22724353 22724353 1 + C T UCEC 22724353 + 22724333 22724373 41 TCCTGGACACCTGCCCGGTTCTCAGGCTCCCTCCTTGGGGG TCCTGGACACCTGCCCGGTTTTCAGGCTCCCTCCTTGGGGG Direct Gain 0 0.965428174962887 0 0.9233757853508 prediction 0.930856349925774 Functional Gain - BMS1P20;ZNF280B ENSG00000211649 CDS Human IG_V_gene chr22:22724353 chr22:22724353 synonymous SNV . 0 21 hPsi_associated_SNPs_103300 0 0 0 0 0 unknown 0 0.438718592995102 0.8467515707016 0 hPsi_site_2260 iPseU_CNN:0.8467515707016;iRNA_PseU:0 2261 chr3 39174675 39174675 1 + G A STAD 39174675 - 39174655 39174695 41 ATAAGACTGTACCGCCTTGTCATACTCTTTCTCTGCCAGGT ATAAGACTGTACCGCCTTGTTATACTCTTTCTCTGCCAGGT Direct Gain 0 0.965424551630835 0 0.999972522258759 prediction 0.930849103261669 Functional Gain - TTC21A ENSG00000168026 CDS Human protein_coding chr3:39174675 chr3:39174675 nonsynonymous SNV 0.152 0 21 hPsi_associated_SNPs_103301 0 0 0 0 0 nucleus 0 0.438728153059919 0.999945044517518 0 hPsi_site_2261 iPseU_CNN:0.999945044517518;iRNA_PseU:0 2262 chr15 74318746 74318746 1 + C T rs531262037 74318746 + 74318726 74318766 41 TGGTCTTGAACTCCTGACCTCATGATCTGCCCGCCTCGGCC TGGTCTTGAACTCCTGACCTTATGATCTGCCCGCCTCGGCC Direct Gain 0 0.965416067964286 0 0.992777466773987 prediction 0.930832135928572 Functional Gain - PML ENSG00000140464 intronic Human protein_coding chr15:74318746 chr15:74318746 . . 0 21 hPsi_associated_SNPs_103302 0 0 0 0 0 Cytosol 0 0.43871859278744 0.985554933547974 0 hPsi_site_2262 iPseU_CNN:0.985554933547974;iRNA_PseU:0 2263 chr20 35207199 35207199 1 + G A BRCA 35207199 - 35207179 35207219 41 GGAGAGGAGGCCTTCGTCCTCACCTAGATCACTGTCCGACA GGAGAGGAGGCCTTCGTCCTTACCTAGATCACTGTCCGACA Direct Gain 0 0.965413689099781 0 0.999999821186066 prediction 0.930827378199563 Functional Gain - TGIF2;TGIF2-C20orf24 ENSG00000118707;ENSG00000259399 CDS Human other chr20:35207199 chr20:35207199 nonsynonymous SNV 0.842 1 21 hPsi_associated_SNPs_103303 0 0 0 0 0 unknown 0 0.438718603163615 0.999999642372132 0 hPsi_site_2263 iPseU_CNN:0.999999642372132;iRNA_PseU:0 2264 chr2 25314246 25314246 1 + C A UCEC 25314246 - 25314226 25314266 41 GGATCCTCAGGGAAGATGTTGTCAACCAGCCTTTTGTACCT GGATCCTCAGGGAAGATGTTTTCAACCAGCCTTTTGTACCT Direct Gain 0 0.965402957781439 0 0.29542338848114 prediction 0.930805915562878 Functional Gain - EFR3B ENSG00000084710 CDS Human protein_coding chr2:25314246 chr2:25314246 nonsynonymous SNV 0.986 4 21 hPsi_associated_SNPs_103304 0 0 0 0 0 Nucleus 0 0.43871859009362 0 0 hPsi_site_2264 iPseU_CNN:0;iRNA_PseU:0 2265 chr4 134076151 134076151 1 + G A STAD 134076151 - 134076131 134076171 41 CTGGGCACGGTTGGTGGCATCATGATCACTATCTCCCTGTT CTGGGCACGGTTGGTGGCATTATGATCACTATCTCCCTGTT Direct Gain 0 0.965398047494545 0 0.13807675242424 prediction 0.93079609498909 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134076151 chr4:134076151 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_103305 0 0 0 0 0 cytosol 0 0.438718579441735 0 0 hPsi_site_2265 iPseU_CNN:0;iRNA_PseU:0 2266 chr17 3101697 3101697 1 + G A SKCM 3101697 - 3101677 3101717 41 AGTTTCTGTAGGGCTGCCTTCATATCCCAATTTCTCAGACT AGTTTCTGTAGGGCTGCCTTTATATCCCAATTTCTCAGACT Direct Gain 0 0.965395307003765 0 0.992240786552429 prediction 0.930790614007531 Functional Gain - OR1A2 ENSG00000172150 CDS Human protein_coding chr17:3101697 chr17:3101697 nonsynonymous SNV 0.035 1 21 hPsi_associated_SNPs_103306 0 0 0 0 0 exosome 0 0.438718590484274 0.984481573104858 0 hPsi_site_2266 iPseU_CNN:0.984481573104858;iRNA_PseU:0 2267 chrX 84526421 84526421 1 + G T LIHC 84526421 + 84526401 84526441 41 CTCACAAATGTGAGGTCTGTGATAAAGGTTTTCATCGTCCT CTCACAAATGTGAGGTCTGTTATAAAGGTTTTCATCGTCCT Direct Gain 0 0.965389618413441 0 0.635694622993469 prediction 0.930779236826881 Functional Gain - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84526421 chrX:84526421 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103307 0 0 1 0 0 cytosol 0 0.43893375937516 0.271389245986938 0 hPsi_site_2267 iPseU_CNN:0.271389245986938;iRNA_PseU:0 2268 chr1 156563898 156563898 1 + T A rs1270 156563898 - 156563878 156563918 41 GGCTCTAAGTCTTTATTGGGAAGAATACCCACCCACCTTCC GGCTCTAAGTCTTTATTGGGTAGAATACCCACCCACCTTCC Direct Gain 0 0.965379871914675 0 0.999968767166138 prediction 0.93075974382935 Functional Gain - NAXE ENSG00000163382 UTR3 Human protein_coding chr1:156563898 chr1:156563898 . . 0 21 hPsi_associated_SNPs_103308 0 0 0 0 0 Ribosome 0 0.438718592995246 0.999937534332276 0 hPsi_site_2268 iPseU_CNN:0.999937534332276;iRNA_PseU:0 2269 chr6 150569955 150569955 1 + G A SKCM 150569955 - 150569935 150569975 41 GTTTCACCCTGTTCCAGAATCATACACTCTTCTTCTGCGGA GTTTCACCCTGTTCCAGAATTATACACTCTTCTTCTGCGGA Direct Gain 0 0.965378659603808 0 0.997965931892395 prediction 0.930757319207615 Functional Gain - PPP1R14C ENSG00000198729 CDS Human protein_coding chr6:150569955 chr6:150569955 synonymous SNV . 0 21 hPsi_associated_SNPs_103309 0 0 0 0 0 Ribosome 0 0.438783088062997 0.99593186378479 0 hPsi_site_2269 iPseU_CNN:0.99593186378479;iRNA_PseU:0 2270 chrX 100492731 100492731 1 + G A BLCA 100492731 - 100492711 100492751 41 TTCTCCTGTTGCACCAGGGCCACATCCCCCTGTAGGGGCAG TTCTCCTGTTGCACCAGGGCTACATCCCCCTGTAGGGGCAG Direct Gain 0 0.965356503979832 0 0.999981760978699 prediction 0.930713007959664 Functional Gain - DRP2 ENSG00000102385 CDS Human protein_coding chrX:100492731 chrX:100492731 synonymous SNV . 0 21 hPsi_associated_SNPs_103310 0 0 0 0 0 nucleoplasm 0 0.438718587657259 0.999963521957398 0 hPsi_site_2270 iPseU_CNN:0.999963521957398;iRNA_PseU:0 2271 chr1 248112310 248112310 1 + G T LUAD 248112310 + 248112290 248112330 41 TGATTCTTCTCATCTTCTTGGACACCCATCTCCACACACCC TGATTCTTCTCATCTTCTTGTACACCCATCTCCACACACCC Direct Gain 0 0.965350273190285 0 0.985804319381714 prediction 0.930700546380571 Functional Gain - OR2L8 ENSG00000196936 CDS Human other chr1:248112310 chr1:248112310 nonsynonymous SNV 0.003 3 21 hPsi_associated_SNPs_103311 0 0 0 0 0 unknown 0 0.438960603547635 0.971608638763428 0 hPsi_site_2271 iPseU_CNN:0.971608638763428;iRNA_PseU:0 2272 chr11 72533943 72533943 1 + C T UCEC 72533943 + 72533923 72533963 41 GGAGAGAAGGGAGACTCTGGCTCTGGCCCCTGAGCCAGAGC GGAGAGAAGGGAGACTCTGGTTCTGGCCCCTGAGCCAGAGC Direct Gain 0 0.965348857666598 0 0.999921977519989 prediction 0.930697715333195 Functional Gain - ATG16L2 ENSG00000168010 CDS Human protein_coding chr11:72533943 chr11:72533943 nonsynonymous SNV 0.012 0 21 hPsi_associated_SNPs_103312 0 0 1 0 2 Cytosol 0 0.43871859139171 0.999843955039978 0 hPsi_site_2272 iPseU_CNN:0.999843955039978;iRNA_PseU:0 2273 chr5 96349489 96349489 1 + G T LUSC 96349489 + 96349469 96349509 41 TAAATCCTTATGTTCTGAGTGACAAAGACCGAGCCAACCTT TAAATCCTTATGTTCTGAGTTACAAAGACCGAGCCAACCTT Direct Gain 0 0.965348701854465 0 0.998230934143066 prediction 0.930697403708929 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96349489 chr5:96349489 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103313 0 0 1 0 0 Endoplasmic reticulum 0 0.438717053545437 0.996461868286132 0 hPsi_site_2273 iPseU_CNN:0.996461868286132;iRNA_PseU:0 2274 chr16 8941604 8941604 1 + C T BLCA 8941604 + 8941584 8941624 41 GGCAATGACCATGAGATCTTCACAGACCCCAGAACCATGGG GGCAATGACCATGAGATCTTTACAGACCCCAGAACCATGGG Direct Gain 0 0.965335869215278 0 0.994605779647827 prediction 0.930671738430556 Functional Gain - PMM2 ENSG00000140650 CDS Human protein_coding chr16:8941604 chr16:8941604 synonymous SNV . 0 21 hPsi_associated_SNPs_103314 0 0 1 0 0 Ribosome 0 0.43897502390889 0.989211559295654 0 hPsi_site_2274 iPseU_CNN:0.989211559295654;iRNA_PseU:0 2275 chrX 129148812 129148812 1 + C T rs35645526 129148812 + 129148792 129148832 41 TCCACTTCCTCGCCCTTTGTCATCTTTCCCGAGATCGTGAG TCCACTTCCTCGCCCTTTGTTATCTTTCCCGAGATCGTGAG Direct Gain 0 0.965334594204717 0 0.920325219631195 prediction 0.930669188409434 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148812 chrX:129148812 synonymous SNV . 0 21 hPsi_associated_SNPs_103315 0 0 1 0 0 Cytosol 0 0.438718430844359 0.84065043926239 0 hPsi_site_2275 iPseU_CNN:0.84065043926239;iRNA_PseU:0 2276 chr2 238668799 238668799 1 + G A UCEC 238668799 - 238668779 238668819 41 GCATTTAACTCTTCTTTTGTCATCTTGGTAGGACCTTGGTA GCATTTAACTCTTCTTTTGTTATCTTGGTAGGACCTTGGTA Direct Gain 0 0.965331631881433 0 0.36842805147171 prediction 0.930663263762866 Functional Gain - LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238668799 chr2:238668799 nonsynonymous SNV 0.329 0 21 hPsi_associated_SNPs_103316 0 0 0 0 0 Ribosome 0 0.43864086382507 0 0 hPsi_site_2276 iPseU_CNN:0;iRNA_PseU:0 2277 chr19 45683163 45683163 1 + G A rs142688123 45683163 - 45683143 45683183 41 GTTGGGAAGTAGAATCATGGCTAGGCCCGCGGCCCCGGGTC GTTGGGAAGTAGAATCATGGTTAGGCCCGCGGCCCCGGGTC Direct Gain 0 0.965321109327119 0 0.999539256095886 prediction 0.930642218654237 Functional Gain - BLOC1S3 ENSG00000189114;ENSG00000267545 CDS Human other chr19:45683163 chr19:45683163 synonymous SNV . 0 21 hPsi_associated_SNPs_103317 1 0 0 0 0 Cytosol 0 0.438718593229667 0.999078512191772 0 hPsi_site_2277 iPseU_CNN:0.999078512191772;iRNA_PseU:0 2278 chr1 158817597 158817597 1 + G A rs115388526 158817597 - 158817577 158817617 41 TCTCACACTTGATATTGTGCCATTTTCCACTCCCCACTACA TCTCACACTTGATATTGTGCTATTTTCCACTCCCCACTACA Direct Gain 0 0.965300716261086 0 0.226100027561188 prediction 0.930601432522173 Functional Gain - MNDA ENSG00000163563 CDS Human protein_coding chr1:158817597 chr1:158817597 stopgain 0.988 0 21 hPsi_associated_SNPs_103318 0 0 0 0 0 exosome 0 0.43867726398805 0 0 hPsi_site_2278 iPseU_CNN:0;iRNA_PseU:0 2279 chr21 30566162 30566162 1 + G A rs542933948 30566162 - 30566142 30566182 41 GGAAGCCGAGGTGGGAGGATCACTTGAGCCCGGGAGGCAGA GGAAGCCGAGGTGGGAGGATTACTTGAGCCCGGGAGGCAGA Direct Gain 0 0.965289443470245 0 0.981114268302917 prediction 0.930578886940489 Functional Gain - LINC00189 ENSG00000215533 ncRNA_exonic Human sense_overlapping chr21:30566162 chr21:30566162 . . 0 21 hPsi_associated_SNPs_103319 0 0 0 0 0 unknown 0 0.438718507256351 0.962228536605834 0 hPsi_site_2279 iPseU_CNN:0.962228536605834;iRNA_PseU:0 2280 chr11 123484310 123484310 1 + G A STAD 123484310 - 123484290 123484330 41 CTGTGGGCGTGGTGACCGGGCTCATCACCTCTTCCAGGTGA CTGTGGGCGTGGTGACCGGGTTCATCACCTCTTCCAGGTGA Direct Gain 0 0.965260089715449 0 0.999988913536072 prediction 0.930520179430899 Functional Gain - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123484310 chr11:123484310 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_103320 0 0 0 0 0 Cytosol 0 0.438724870001785 0.999977827072144 0 hPsi_site_2280 iPseU_CNN:0.999977827072144;iRNA_PseU:0 2281 chr20 62517383 62517383 1 + C T BLCA 62517383 + 62517363 62517403 41 TTCCAGGGCTCATCCATTTTCACACTCCTTTAGGTAAGGCT TTCCAGGGCTCATCCATTTTTACACTCCTTTAGGTAAGGCT Direct Gain 0 0.965259877252519 0 0.918371617794037 prediction 0.930519754505038 Functional Gain - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62517383 chr20:62517383 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_103321 0 0 1 0 2 Ribosome 0 0.438719001532343 0.836743235588074 0 hPsi_site_2281 iPseU_CNN:0.836743235588074;iRNA_PseU:0 2282 chr2 73650041 73650041 1 + G A UCEC 73650041 - 73650021 73650061 41 ATCAGGCGCAAATTCTTGGTCTTGTGTCAAACAGGTCAGCA ATCAGGCGCAAATTCTTGGTTTTGTGTCAAACAGGTCAGCA Direct Gain 0 0.965259550459721 0 0.23849219083786 prediction 0.930519100919443 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73650041 chr2:73650041 nonsynonymous SNV 0.990 1 21 hPsi_associated_SNPs_103322 0 0 0 0 0 Nucleus 0 0.438725494776493 0 0 hPsi_site_2282 iPseU_CNN:0;iRNA_PseU:0 2283 chr2 113832779 113832779 1 + C T BLCA 113832779 + 113832759 113832799 41 GGTGAAGAGGCCACACGCTTCACCTTCTTCCAGAGCAGCTC GGTGAAGAGGCCACACGCTTTACCTTCTTCCAGAGCAGCTC Direct Gain 0 0.965256391066904 0 0.999911069869995 prediction 0.930512782133807 Functional Gain - IL1F10 ENSG00000136697 CDS Human protein_coding chr2:113832779 chr2:113832779 synonymous SNV . 0 21 hPsi_associated_SNPs_103323 0 0 0 0 1 unknown 0 0.438718238696059 0.99982213973999 0 hPsi_site_2283 iPseU_CNN:0.99982213973999;iRNA_PseU:0 2284 chr22 23505806 23505806 1 + C T rs573035868 23505806 + 23505786 23505826 41 GGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAA GGTGAAAGCCCCCCCCCCGCTACATTAGCTGCGCCCCTGAA Direct Gain 0 0.965216131243917 0 0.999927639961243 prediction 0.930432262487833 Functional Gain - RAB36 ENSG00000100228 UTR3 Human protein_coding chr22:23505806 chr22:23505806 . . 0 21 hPsi_associated_SNPs_103324 0 0 0 0 0 Nucleus 0 0.438718320564171 0.999855279922486 0 hPsi_site_2284 iPseU_CNN:0.999855279922486;iRNA_PseU:0 2285 chr4 164271851 164271851 1 + G A SKCM 164271851 - 164271831 164271871 41 TTAGATATGGGATGTTTTATCATATGATACCTGACAATGGC TTAGATATGGGATGTTTTATTATATGATACCTGACAATGGC Direct Gain 0 0.965214609152916 0 0.114995062351227 prediction 0.930429218305833 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164271851 chr4:164271851 nonsynonymous SNV 0.820 2 21 hPsi_associated_SNPs_103325 0 0 0 0 0 unknown 0 0.438718010209974 0 0 hPsi_site_2285 iPseU_CNN:0;iRNA_PseU:0 2286 chr12 58010232 58010232 1 + C A UCEC 58010232 - 58010212 58010252 41 TGGCCACCTCCCCTTTGGGTGACAGCAGCAGAGAGGGGAGA TGGCCACCTCCCCTTTGGGTTACAGCAGCAGAGAGGGGAGA Direct Gain 0 0.965188324619543 0 0.0334372520446777 prediction 0.930376649239087 Functional Gain - ARHGEF25 ENSG00000240771 CDS Human protein_coding chr12:58010232 chr12:58010232 stopgain 0.402 0 21 hPsi_associated_SNPs_103326 0 0 0 0 0 chromatin 0 0.438718611229071 0 0 hPsi_site_2286 iPseU_CNN:0;iRNA_PseU:0 2287 chr5 73142255 73142255 1 + C A UCEC 73142255 - 73142235 73142275 41 GGAAGGGATTCAGCCCTGGAGATATTAAAATCCGGTTCAGT GGAAGGGATTCAGCCCTGGATATATTAAAATCCGGTTCAGT Direct Gain 0 0.965179768209773 0 0.92739200592041 prediction 0.930359536419547 Functional Gain - ARHGEF28 ENSG00000214944 CDS Human protein_coding chr5:73142255 chr5:73142255 synonymous SNV . 0 21 hPsi_associated_SNPs_103327 0 0 0 0 0 cytosol 0 0.438718592992833 0.85478401184082 0 hPsi_site_2287 iPseU_CNN:0.85478401184082;iRNA_PseU:0 2288 chr11 67174355 67174355 1 + C T COAD 67174355 + 67174335 67174375 41 TGCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAG TGCTGCGGCGGCTGCTTCCGTACGTGCACAAGCACCTGCAG Direct Gain 0 0.965173597236675 0 0.999575734138489 prediction 0.93034719447335 Functional Gain - TBC1D10C ENSG00000175463 CDS Human protein_coding chr11:67174355 chr11:67174355 nonsynonymous SNV 0.027 0 21 hPsi_associated_SNPs_103328 0 0 0 0 1 nucleus 0 0.439103475312518 0.999151468276978 0 hPsi_site_2288 iPseU_CNN:0.999151468276978;iRNA_PseU:0 2289 chr8 118170001 118170001 1 + G A ESCA 118170001 - 118169981 118170021 41 ATCAGGATACAGCAGGCGCTCACATGCCAGGTACACTAGCA ATCAGGATACAGCAGGCGCTTACATGCCAGGTACACTAGCA Direct Gain 0 0.965169754155738 0 0.9678715467453 prediction 0.930339508311476 Functional Gain - SLC30A8 ENSG00000164756 CDS Human protein_coding chr8:118170001 chr8:118170001 nonsynonymous SNV 0.087 0 21 hPsi_associated_SNPs_103329 0 0 0 0 0 membrane 0 0.440457647401848 0.9357430934906 0 hPsi_site_2289 iPseU_CNN:0.9357430934906;iRNA_PseU:0 2290 chr4 178257449 178257449 1 + G A OV 178257449 - 178257429 178257469 41 AGCTGGGTGGAGACCACTGTCAAAGAGAGCTTCATTTTTGA AGCTGGGTGGAGACCACTGTTAAAGAGAGCTTCATTTTTGA Direct Gain 0 0.965155971595909 0 0.34534353017807 prediction 0.930311943191818 Functional Gain - NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178257449 chr4:178257449 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103330 0 0 0 0 0 chromatin 0 0.438664670889959 0 0 hPsi_site_2290 iPseU_CNN:0;iRNA_PseU:0 2291 chr17 61684801 61684801 1 + G A LUSC 61684801 - 61684781 61684821 41 AAAAACGTTCCTTTCTTCTTCATCTTCAGTTTCCTTGACAT AAAAACGTTCCTTTCTTCTTTATCTTCAGTTTCCTTGACAT Direct Gain 0 0.965145789850063 0 0.984200477600098 prediction 0.930291579700127 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61684801 chr17:61684801 nonsynonymous SNV 0.929 3 21 hPsi_associated_SNPs_103331 0 0 0 0 0 Ribosome 0 0.438346726593689 0.968400955200196 0 hPsi_site_2291 iPseU_CNN:0.968400955200196;iRNA_PseU:0 2292 chr1 14105806 14105806 1 + C T LIHC 14105806 + 14105786 14105826 41 GACGGCATCAGCGTAGAGTTCACGAACGTCATCTGATTCCC GACGGCATCAGCGTAGAGTTTACGAACGTCATCTGATTCCC Direct Gain 0 0.965145551581268 0 0.999963998794556 prediction 0.930291103162537 Functional Gain - PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14105806 chr1:14105806 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_103332 0 0 1 0 0 Cytosol 0 0.439226891995932 0.999927997589112 0 hPsi_site_2292 iPseU_CNN:0.999927997589112;iRNA_PseU:0 2293 chr1 70486789 70486789 1 + G A LUSC 70486789 - 70486769 70486809 41 AACTTTCCCAGCATTTTCGTCATCTTCTTTTTTGTCTTCAA AACTTTCCCAGCATTTTCGTTATCTTCTTTTTTGTCTTCAA Direct Gain 0 0.965143165891663 0 1 prediction 0.930286331783327 Functional Gain - LRRC7 ENSG00000033122 CDS Human protein_coding chr1:70486789 chr1:70486789 nonsynonymous SNV 0.985 1 21 hPsi_associated_SNPs_103333 0 0 0 0 0 cytosol 0 0.438715355458019 1 0 hPsi_site_2293 iPseU_CNN:1;iRNA_PseU:0 2294 chr12 96653572 96653572 1 + C T UCEC 96653572 + 96653552 96653592 41 GCATACATTTCTGGAGCAGCCTTAGTCCAGTTGCTCCGCTG GCATACATTTCTGGAGCAGCTTTAGTCCAGTTGCTCCGCTG Direct Gain 0 0.965140878370405 0 0.998074293136597 prediction 0.93028175674081 Functional Gain - ELK3 ENSG00000111145 CDS Human protein_coding chr12:96653572 chr12:96653572 nonsynonymous SNV 0.918 3 21 hPsi_associated_SNPs_103334 0 0 0 0 2 Nucleus 0 0.438612947510546 0.996148586273194 0 hPsi_site_2294 iPseU_CNN:0.996148586273194;iRNA_PseU:0 2295 chr20 53205042 53205042 1 + G A SKCM 53205042 - 53205022 53205062 41 GGCAATCGAGCTACGTTCTTCACATTATTGAGTTCTGTAAC GGCAATCGAGCTACGTTCTTTACATTATTGAGTTCTGTAAC Direct Gain 0 0.965119829461075 0 0.993852734565735 prediction 0.93023965892215 Functional Gain - DOK5 ENSG00000101134 CDS Human protein_coding chr20:53205042 chr20:53205042 synonymous SNV . 0 21 hPsi_associated_SNPs_103335 0 0 0 0 0 exosome 0 0.438716768345582 0.98770546913147 0 hPsi_site_2295 iPseU_CNN:0.98770546913147;iRNA_PseU:0 2296 chr18 9887548 9887548 1 + G T CESC 9887548 + 9887528 9887568 41 CCATCCAGCCCAAGAAGGGTGACATCCCCAAGTCCCCAGAA CCATCCAGCCCAAGAAGGGTTACATCCCCAAGTCCCCAGAA Direct Gain 0 0.965107650853706 0 0.993518710136414 prediction 0.930215301707411 Functional Gain - TXNDC2 ENSG00000168454 CDS Human protein_coding chr18:9887548 chr18:9887548 nonsynonymous SNV 0.000 2 21 hPsi_associated_SNPs_103336 0 0 0 0 0 exosome 0 0.438718592995102 0.987037420272828 0 hPsi_site_2296 iPseU_CNN:0.987037420272828;iRNA_PseU:0 2297 chr6 31685375 31685375 1 + C T BLCA 31685375 + 31685355 31685395 41 CAGCCCCAGTGACCTTGATTCACCAACATCCAGCCTGCGTC CAGCCCCAGTGACCTTGATTTACCAACATCCAGCCTGCGTC Direct Gain 0 0.965098253309583 0 0.993032574653625 prediction 0.930196506619167 Functional Gain - LY6G6D ENSG00000204424;ENSG00000244355;ENSG00000250641 CDS Human other chr6:31685375 chr6:31685375 nonsynonymous SNV 0.909 2 21 hPsi_associated_SNPs_103337 0 0 0 0 1 exosome 0 0.438718546728234 0.98606514930725 0 hPsi_site_2297 iPseU_CNN:0.98606514930725;iRNA_PseU:0 2298 chr5 145393487 145393487 1 + C T SKCM 145393487 + 145393467 145393507 41 TCACAACAGCCTTGAACACTCTCAACCGGATGGTCCATTCT TCACAACAGCCTTGAACACTTTCAACCGGATGGTCCATTCT Direct Gain 0 0.965095294080537 0 0.993954837322235 prediction 0.930190588161073 Functional Gain - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145393487 chr5:145393487 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_103338 0 0 0 0 0 exosome 0 0.438718598376099 0.98790967464447 0 hPsi_site_2298 iPseU_CNN:0.98790967464447;iRNA_PseU:0 2299 chr15 101425524 101425524 1 + C T LGG 101425524 + 101425504 101425544 41 GAGTGGGAAAAAGTTTGCTACATGTAACCCTTCAACTCGGG GAGTGGGAAAAAGTTTGCTATATGTAACCCTTCAACTCGGG Direct Gain 0 0.965067119064115 0 0.965673565864563 prediction 0.93013423812823 Functional Gain - ALDH1A3 ENSG00000184254 CDS Human protein_coding chr15:101425524 chr15:101425524 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103339 0 0 0 0 2 Nucleus 0 0.438687188686982 0.931347131729126 0 hPsi_site_2299 iPseU_CNN:0.931347131729126;iRNA_PseU:0 2300 chr5 21491581 21491581 1 + G A ESCA 21491581 - 21491561 21491601 41 TAGGCGGGGTGTTCGTGCATCAGGTACGGCCACCAGAGGTT TAGGCGGGGTGTTCGTGCATTAGGTACGGCCACCAGAGGTT Direct Gain 0 0.965061680896357 0 0.988170504570007 prediction 0.930123361792713 Functional Gain - GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21491581 chr5:21491581 . . 0 21 hPsi_associated_SNPs_103340 0 0 0 0 0 unknown 0 0.442065251726867 0.976341009140014 0 hPsi_site_2300 iPseU_CNN:0.976341009140014;iRNA_PseU:0 2301 chr4 77661110 77661110 1 + A T DLBC 77661110 + 77661090 77661130 41 AAAGAGCACCCACAGTAACAAACCATCTTCTCATCCCCACA AAAGAGCACCCACAGTAACATACCATCTTCTCATCCCCACA Direct Gain 0 0.965058900018103 0 0.383518874645233 prediction 0.930117800036206 Functional Gain - SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661110 chr4:77661110 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_103341 0 0 1 0 0 Ribosome 0 0.438710970201502 0 0 hPsi_site_2301 iPseU_CNN:0;iRNA_PseU:0 2302 chr4 89591320 89591320 1 + G A BLCA 89591320 - 89591300 89591340 41 CTCAGGAATGTAAAATGTATCATATTCCACATGCTTCACTT CTCAGGAATGTAAAATGTATTATATTCCACATGCTTCACTT Direct Gain 0 0.965054752195981 0 0.967286825180054 prediction 0.930109504391961 Functional Gain - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89591320 chr4:89591320 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_103342 0 0 0 0 0 Ribosome 0 0.436191280609345 0.934573650360108 0 hPsi_site_2302 iPseU_CNN:0.934573650360108;iRNA_PseU:0 2303 chr1 203689718 203689718 1 + C T SKCM 203689718 + 203689698 203689738 41 GCAAAGGAGGCTTCAGACATCATCCTAACAGATGACAACTT GCAAAGGAGGCTTCAGACATTATCCTAACAGATGACAACTT Direct Gain 0 0.965050713076398 0 0.94501519203186 prediction 0.930101426152795 Functional Gain - ATP2B4 ENSG00000058668 CDS Human protein_coding chr1:203689718 chr1:203689718 synonymous SNV . 0 21 hPsi_associated_SNPs_103343 0 0 1 0 1 Endoplasmic reticulum 0 0.438718584673057 0.89003038406372 0 hPsi_site_2303 iPseU_CNN:0.89003038406372;iRNA_PseU:0 2304 chr4 154624714 154624714 1 + G T UCEC 154624714 + 154624694 154624734 41 TACTGCTGGAGATTTTTGTAGATGTTACAAGTTCCGTGGAA TACTGCTGGAGATTTTTGTATATGTTACAAGTTCCGTGGAA Direct Gain 0 0.965033259573044 0 0.988885998725891 prediction 0.930066519146088 Functional Gain - TLR2 ENSG00000137462 CDS Human protein_coding chr4:154624714 chr4:154624714 nonsynonymous SNV 0.302 5 21 hPsi_associated_SNPs_103344 0 0 0 0 0 exosome 0 0.438719246955831 0.977771997451782 0 hPsi_site_2304 iPseU_CNN:0.977771997451782;iRNA_PseU:0 2305 chr15 50494772 50494772 1 + C A rs140346592 50494772 - 50494752 50494792 41 AAGGGCAGAGTGATATAGATGACATCATCTGCCTTCAATCC AAGGGCAGAGTGATATAGATTACATCATCTGCCTTCAATCC Direct Gain 0 0.965030821657555 0 0.97944438457489 prediction 0.930061643315111 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50494772 chr15:50494772 synonymous SNV . 0 21 hPsi_associated_SNPs_103345 0 0 0 0 0 Ribosome 0 0.43871713558626 0.95888876914978 0 hPsi_site_2305 iPseU_CNN:0.95888876914978;iRNA_PseU:0 2306 chr12 21069729 21069729 1 + A T rs117703648 21069729 + 21069709 21069749 41 GATCCTGCAGAAGAAATAGAAATATTCAAATATTGCAAGGT GATCCTGCAGAAGAAATAGATATATTCAAATATTGCAAGGT Direct Gain 0 0.965027103042778 0 0.999636292457581 prediction 0.930054206085557 Functional Gain - SLCO1B3 ENSG00000111700;ENSG00000205754;ENSG00000257046 intronic Human other chr12:21069729 chr12:21069729 . . 0 21 hPsi_associated_SNPs_103346 1 0 0 0 0 exosome 0 0.438718594942261 0.999272584915162 0 hPsi_site_2306 iPseU_CNN:0.999272584915162;iRNA_PseU:0 2307 chr5 137221810 137221810 1 + G T UCEC 137221810 + 137221790 137221830 41 GTTTTAGAGGGAGATTCAGTGAAACTAGAATGCCAGATCTC GTTTTAGAGGGAGATTCAGTTAAACTAGAATGCCAGATCTC Direct Gain 0 0.965025379715012 0 0.999641299247742 prediction 0.930050759430024 Functional Gain - MYOT ENSG00000120729 CDS Human protein_coding chr5:137221810 chr5:137221810 synonymous SNV . 0 21 hPsi_associated_SNPs_103347 0 0 0 0 2 Cytosol 0 0.383462644197836 0.999282598495484 0 hPsi_site_2307 iPseU_CNN:0.999282598495484;iRNA_PseU:0 2308 chr1 228880399 228880399 1 + G A rs191551066 228880399 - 228880379 228880419 41 GTTGGCCTTTCAAGAGTATTCACCTCCCTGCCGAAGAGACA GTTGGCCTTTCAAGAGTATTTACCTCCCTGCCGAAGAGACA Direct Gain 0 0.965024400241263 0 0.973603308200836 prediction 0.930048800482526 Functional Gain - RHOU ENSG00000116574 UTR3 Human protein_coding chr1:228880399 chr1:228880399 . . 0 21 hPsi_associated_SNPs_103348 0 0 0 0 0 Ribosome 0 0.437979371659005 0.947206616401672 0 hPsi_site_2308 iPseU_CNN:0.947206616401672;iRNA_PseU:0 2309 chr19 45650248 45650248 1 + G A rs566900298 45650248 - 45650228 45650268 41 TCTGGGGCTGTTCTGTGCATCTCAACCACCACCAGCACGCA TCTGGGGCTGTTCTGTGCATTTCAACCACCACCAGCACGCA Direct Gain 0 0.965015901458776 0 0.999388635158539 prediction 0.930031802917552 Functional Gain - PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650248 chr19:45650248 . . 0 21 hPsi_associated_SNPs_103349 0 0 0 0 0 Ribosome 0 0.438724020934522 0.998777270317078 0 hPsi_site_2309 iPseU_CNN:0.998777270317078;iRNA_PseU:0 2310 chr13 42017213 42017213 1 + G T rs202006242 42017213 + 42017193 42017233 41 AGAGACATGCTCCTGAGTGTGATGGCCTATGACCGGTTTGT AGAGACATGCTCCTGAGTGTTATGGCCTATGACCGGTTTGT Direct Gain 0 0.965009680410572 0 0.997192144393921 prediction 0.930019360821144 Functional Gain - OR7E37P ENSG00000215480 ncRNA_exonic Human unprocessed_pseudogene chr13:42017213 chr13:42017213 . . 0 21 hPsi_associated_SNPs_103350 0 0 0 0 0 unknown 0 0.438737587120943 0.994384288787842 0 hPsi_site_2310 iPseU_CNN:0.994384288787842;iRNA_PseU:0 2311 chr16 30198771 30198771 1 + G A UCEC 30198771 - 30198751 30198791 41 ATGCGGCTGAAGCCCGTGGTCAGGATCTTCCCCTCCGACAC ATGCGGCTGAAGCCCGTGGTTAGGATCTTCCCCTCCGACAC Direct Gain 0 0.964987373038132 0 0.990304887294769 prediction 0.929974746076264 Functional Gain - CORO1A ENSG00000102879 CDS Human protein_coding chr16:30198771 chr16:30198771 synonymous SNV . 0 21 hPsi_associated_SNPs_103351 0 0 0 0 0 Cytosol 0 0.43871795449594 0.980609774589538 0 hPsi_site_2311 iPseU_CNN:0.980609774589538;iRNA_PseU:0 2312 chr10 8097653 8097653 1 + G A ESCA 8097653 - 8097633 8097673 41 GCACGGCGGGGTGGTGGTGGCTCACCCAGCGCGGCTGGTCC GCACGGCGGGGTGGTGGTGGTTCACCCAGCGCGGCTGGTCC Direct Gain 0 0.964980708253026 0 0.995739996433258 prediction 0.929961416506053 Functional Gain - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8097653 chr10:8097653 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103352 0 0 0 0 0 Cytosol 0 0.439412315351084 0.991479992866516 0 hPsi_site_2312 iPseU_CNN:0.991479992866516;iRNA_PseU:0 2313 chr9 131249075 131249075 1 + G A rs56337001 131249075 - 131249055 131249095 41 TGGTGCCATGATTGCTCATTCACATATGAACACTCACCTAA TGGTGCCATGATTGCTCATTTACATATGAACACTCACCTAA Direct Gain 0 0.964965890275503 0 0.945366978645325 prediction 0.929931780551006 Functional Gain - MIR1268A ENSG00000136811 intronic Human protein_coding chr9:131249075 chr9:131249075 . . 0 21 hPsi_associated_SNPs_103353 0 0 0 0 0 unknown 0 0.396658897920488 0.89073395729065 0 hPsi_site_2313 iPseU_CNN:0.89073395729065;iRNA_PseU:0 2314 chr1 43056351 43056351 1 + G A rs553872980 43056351 - 43056331 43056371 41 GTAGTGGCATGATCATGGCTCATTGCAACCCCGACCTCCCA GTAGTGGCATGATCATGGCTTATTGCAACCCCGACCTCCCA Direct Gain 0 0.964951953945219 0 0.999898314476013 prediction 0.929903907890439 Functional Gain - CCDC30 ENSG00000186409 intronic Human protein_coding chr1:43056351 chr1:43056351 . . 0 21 hPsi_associated_SNPs_103354 0 0 0 0 0 Nucleus 0 0.438708295780195 0.999796628952026 0 hPsi_site_2314 iPseU_CNN:0.999796628952026;iRNA_PseU:0 2315 chr9 138662884 138662884 1 + C T LGG 138662884 + 138662864 138662904 41 AGAAGAGGGCCTTCTCGGGGCAGGGGCTGCACGAGGGTCCG AGAAGAGGGCCTTCTCGGGGTAGGGGCTGCACGAGGGTCCG Direct Gain 0 0.964950577499753 0 0.965170741081238 prediction 0.929901154999505 Functional Gain - KCNT1 ENSG00000107147 CDS Human protein_coding chr9:138662884 chr9:138662884 stopgain 0.092 0 21 hPsi_associated_SNPs_103355 0 0 0 0 1 exosome 0 0.438718603548726 0.930341482162476 0 hPsi_site_2315 iPseU_CNN:0.930341482162476;iRNA_PseU:0 2316 chr19 58187714 58187714 1 + G T LUAD 58187714 + 58187694 58187734 41 GAATTGCAAAGACTTTATAGGATCTTTCACTCATGGCTGCA GAATTGCAAAGACTTTATAGTATCTTTCACTCATGGCTGCA Direct Gain 0 0.96494754937083 0 0.999872803688049 prediction 0.929895098741661 Functional Gain - ZSCAN4 ENSG00000180532 CDS Human protein_coding chr19:58187714 chr19:58187714 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_103356 0 0 0 0 0 exosome 0 0.438174795661681 0.999745607376098 0 hPsi_site_2316 iPseU_CNN:0.999745607376098;iRNA_PseU:0 2317 chr16 30532938 30532938 1 + G T BLCA 30532938 + 30532918 30532958 41 GCTGGGGATCCCGGCTGCCTGAAGCCCCTCCATGAGAAGGA GCTGGGGATCCCGGCTGCCTTAAGCCCCTCCATGAGAAGGA Direct Gain 0 0.964938659426375 0 0.993128418922424 prediction 0.92987731885275 Functional Gain - ITGAL ENSG00000005844 CDS Human protein_coding chr16:30532938 chr16:30532938 synonymous SNV . 0 21 hPsi_associated_SNPs_103357 0 0 0 0 0 Cytosol 0 0.43871840173001 0.986256837844848 0 hPsi_site_2317 iPseU_CNN:0.986256837844848;iRNA_PseU:0 2318 chr2 99172237 99172237 1 + G A COAD 99172237 - 99172217 99172257 41 GGATGGCATGCAGTGGAGGGCATGGTGGAGGGGCATGGTGA GGATGGCATGCAGTGGAGGGTATGGTGGAGGGGCATGGTGA Direct Gain 0 0.964931665693051 0 0.435515016317368 prediction 0.929863331386102 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99172237 chr2:99172237 nonsynonymous SNV 0.697 0 21 hPsi_associated_SNPs_103358 0 0 0 0 0 Ribosome 0 0.438719114580787 0 0 hPsi_site_2318 iPseU_CNN:0;iRNA_PseU:0 2319 chr3 49211830 49211830 1 + G A BLCA 49211830 - 49211810 49211850 41 CCCCAGGCCCTTACCCAGGACATAGATCTTGTTCCCGTGCA CCCCAGGCCCTTACCCAGGATATAGATCTTGTTCCCGTGCA Direct Gain 0 0.964923594087117 0 0.998242676258087 prediction 0.929847188174233 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49211830 chr3:49211830 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103359 0 0 0 0 0 Cytosol 0 0.438719832224298 0.996485352516174 0 hPsi_site_2319 iPseU_CNN:0.996485352516174;iRNA_PseU:0 2320 chr11 1272531 1272531 1 + C T LUSC 1272531 + 1272511 1272551 41 AGGGCCACCAATTCCACGGCCACACCCTCCTCCACTCTGGG AGGGCCACCAATTCCACGGCTACACCCTCCTCCACTCTGGG Direct Gain 0 0.964923442600317 0 0.99472850561142 prediction 0.929846885200634 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1272531 chr11:1272531 synonymous SNV . 0 21 hPsi_associated_SNPs_103360 0 0 0 0 0 Endoplasmic reticulum 0 0.438719049967537 0.98945701122284 0 hPsi_site_2320 iPseU_CNN:0.98945701122284;iRNA_PseU:0 2321 chr17 64637581 64637581 1 + G A LUSC 64637581 - 64637561 64637601 41 AAAGAAAACTTACTTACTGTCACATTTCATCCCTTGATGGA AAAGAAAACTTACTTACTGTTACATTTCATCCCTTGATGGA Direct Gain 0 0.964922761992394 0 0.942930817604065 prediction 0.929845523984789 Functional Gain - PRKCA ENSG00000154229 CDS Human protein_coding chr17:64637581 chr17:64637581 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103361 0 0 0 0 0 Ribosome 0 0.438718592768842 0.88586163520813 0 hPsi_site_2321 iPseU_CNN:0.88586163520813;iRNA_PseU:0 2322 chr16 2812535 2812535 1 + C T BLCA 2812535 + 2812515 2812555 41 CCCAGCCAGACGTGGCCGCTCACGCTCTAGAACCCCAGCTA CCCAGCCAGACGTGGCCGCTTACGCTCTAGAACCCCAGCTA Direct Gain 0 0.964921185155179 0 0.999329924583435 prediction 0.929842370310359 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812535 chr16:2812535 nonsynonymous SNV 0.144 3 21 hPsi_associated_SNPs_103362 0 0 1 0 0 Nucleus 0 0.438723828715506 0.99865984916687 0 hPsi_site_2322 iPseU_CNN:0.99865984916687;iRNA_PseU:0 2323 chr12 82752565 82752565 1 + C T BLCA 82752565 + 82752545 82752585 41 GGAGACGGAGGCCCTGCCCTCAGAGACGCGCCCCCTAGTGG GGAGACGGAGGCCCTGCCCTTAGAGACGCGCCCCCTAGTGG Direct Gain 0 0.964901706612063 0 0.982224702835083 prediction 0.929803413224127 Functional Gain - METTL25 ENSG00000127720 CDS Human protein_coding chr12:82752565 chr12:82752565 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_103363 0 0 0 0 1 cytosol 0 0.438716567168297 0.964449405670166 0 hPsi_site_2323 iPseU_CNN:0.964449405670166;iRNA_PseU:0 2324 chr19 22271246 22271246 1 + G A rs143566184 22271246 - 22271226 22271266 41 AAAAGCTTTTCCACACTCTTCACATTTGTAGGGTTTCTCTC AAAAGCTTTTCCACACTCTTTACATTTGTAGGGTTTCTCTC Direct Gain 0 0.964899104203194 0 0.983129560947418 prediction 0.929798208406388 Functional Gain - ZNF257 ENSG00000197134 CDS Human protein_coding chr19:22271246 chr19:22271246 nonsynonymous SNV 0.043 0 21 hPsi_associated_SNPs_103364 0 0 0 0 0 chromatin 0 0.43801914409969 0.966259121894836 0 hPsi_site_2324 iPseU_CNN:0.966259121894836;iRNA_PseU:0 2325 chr1 223943324 223943324 1 + G A STAD 223943324 - 223943304 223943344 41 ATGCCAAAGCCGATGGTGTGCATGTCCTCGCCCATCTTCCT ATGCCAAAGCCGATGGTGTGTATGTCCTCGCCCATCTTCCT Direct Gain 0 0.964897442025594 0 0.993483304977417 prediction 0.929794884051188 Functional Gain - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943324 chr1:223943324 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_103365 0 0 0 0 0 Ribosome 0 0.438716035757137 0.986966609954834 0 hPsi_site_2325 iPseU_CNN:0.986966609954834;iRNA_PseU:0 2326 chr15 102358506 102358506 1 + G A CESC 102358506 - 102358486 102358526 41 ACAATGACAAGGTTTCCCATCATGCTCGCAAAGTAGAACAA ACAATGACAAGGTTTCCCATTATGCTCGCAAAGTAGAACAA Direct Gain 0 0.964862213784685 0 0.999961853027344 prediction 0.929724427569369 Functional Gain - OR4F15 ENSG00000182854 CDS Human protein_coding chr15:102358506 chr15:102358506 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103366 0 0 0 0 0 unknown 0 0.438718228930752 0.999923706054688 0 hPsi_site_2326 iPseU_CNN:0.999923706054688;iRNA_PseU:0 2327 chr15 86838515 86838515 1 + C A ESCA 86838515 - 86838495 86838535 41 AAGTAGACCTCTTTGAGGTTGACACTCTTTTCCAGGATGTC AAGTAGACCTCTTTGAGGTTTACACTCTTTTCCAGGATGTC Direct Gain 0 0.964847965991344 0 0.980444669723511 prediction 0.929695931982689 Functional Gain - AGBL1 ENSG00000166748 CDS Human other chr15:86838515 chr15:86838515 synonymous SNV . 0 21 hPsi_associated_SNPs_103367 0 0 0 0 0 exosome 0 0.438718697429588 0.960889339447022 0 hPsi_site_2327 iPseU_CNN:0.960889339447022;iRNA_PseU:0 2328 chr3 50257341 50257341 1 + C T SKCM 50257341 + 50257321 50257361 41 TCTGCCCCATTCCTCATCTTCATCTTCCCTGCCATCTTCTA TCTGCCCCATTCCTCATCTTTATCTTCCCTGCCATCTTCTA Direct Gain 0 0.964845612148217 0 0.999846518039703 prediction 0.929691224296435 Functional Gain - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50257341 chr3:50257341 . . 0 21 hPsi_associated_SNPs_103368 0 0 1 0 2 exosome 0 0.438718592995092 0.999693036079406 0 hPsi_site_2328 iPseU_CNN:0.999693036079406;iRNA_PseU:0 2329 chr6 163149393 163149393 1 + C T CESC 163149393 + 163149373 163149413 41 TCTCTGGTTTCTGAGGGTTTCACAGTCAAAGCCATGATGAA TCTCTGGTTTCTGAGGGTTTTACAGTCAAAGCCATGATGAA Direct Gain 0 0.964842283954533 0 0.851502060890198 prediction 0.929684567909065 Functional Gain - PACRG ENSG00000112530 CDS Human protein_coding chr6:163149393 chr6:163149393 synonymous SNV . 0 21 hPsi_associated_SNPs_103369 0 0 0 0 1 Nucleus 0 0.438723382242515 0.703004121780396 0 hPsi_site_2329 iPseU_CNN:0.703004121780396;iRNA_PseU:0 2330 chr14 75537699 75537699 1 + G T UCEC 75537699 + 75537679 75537719 41 GTGGACCGGGCGTTCCCATTGAAACCCATGGTCCACAGGAA GTGGACCGGGCGTTCCCATTTAAACCCATGGTCCACAGGAA Direct Gain 0 0.964832017600394 0 0.972196102142334 prediction 0.929664035200789 Functional Gain - ZC2HC1C ENSG00000119703 CDS Human protein_coding chr14:75537699 chr14:75537699 nonsynonymous SNV 0.920 4 21 hPsi_associated_SNPs_103370 0 0 0 0 0 exosome 0 0.438718512412416 0.944392204284668 0 hPsi_site_2330 iPseU_CNN:0.944392204284668;iRNA_PseU:0 2331 chr16 72132851 72132851 1 + G T BLCA 72132851 + 72132831 72132871 41 TGAGGGGCAAGTACTCGGATGACACGCCTCTGCCAACTCCC TGAGGGGCAAGTACTCGGATTACACGCCTCTGCCAACTCCC Direct Gain 0 0.96481109571328 0 0.999893069267273 prediction 0.929622191426561 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72132851 chr16:72132851 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_103371 0 0 1 0 2 Cytosol 0 0.438729253880766 0.999786138534546 0 hPsi_site_2331 iPseU_CNN:0.999786138534546;iRNA_PseU:0 2332 chr3 167623698 167623698 1 + G A rs997453 167623698 - 167623678 167623718 41 CAGTTGACTTCCTTGAACGTCATGTCTACCTTGTGCCAAGT CAGTTGACTTCCTTGAACGTTATGTCTACCTTGTGCCAAGT Direct Gain 0 0.96480607853124 0 0.950215458869934 prediction 0.929612157062479 Functional Gain - LRRC77P ENSG00000244227 ncRNA_exonic Human transcribed_unitary_pseudogene chr3:167623698 chr3:167623698 . . 0 21 hPsi_associated_SNPs_103372 0 0 0 0 0 unknown 0 0.444369205709423 0.900430917739868 0 hPsi_site_2332 iPseU_CNN:0.900430917739868;iRNA_PseU:0 2333 chr10 75533251 75533251 1 + G T LIHC 75533251 + 75533231 75533271 41 AGAAGCTGGCAGAGTTTATTGACTTTCTGGACAAGAATGAT AGAAGCTGGCAGAGTTTATTTACTTTCTGGACAAGAATGAT Direct Gain 0 0.96480202986156 0 0.999748229980469 prediction 0.929604059723121 Functional Gain - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75533251 chr10:75533251 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103373 0 0 1 0 0 Endoplasmic reticulum 0 0.438865905108449 0.999496459960938 0 hPsi_site_2333 iPseU_CNN:0.999496459960938;iRNA_PseU:0 2334 chr11 30255200 30255200 1 + G A UCEC 30255200 - 30255180 30255220 41 GCATGGTGAGCACAGCCGGGCACTCTCACTGTTTCGTATAC GCATGGTGAGCACAGCCGGGTACTCTCACTGTTTCGTATAC Direct Gain 0 0.964791551794931 0 0.882853984832764 prediction 0.929583103589863 Functional Gain - FSHB ENSG00000131808 CDS Human protein_coding chr11:30255200 chr11:30255200 synonymous SNV . 0 21 hPsi_associated_SNPs_103374 0 0 0 0 0 unknown 0 0.438753179162083 0.765707969665528 0 hPsi_site_2334 iPseU_CNN:0.765707969665528;iRNA_PseU:0 2335 chr11 1858197 1858197 1 + G T LUAD 1858197 + 1858177 1858217 41 GCCCTCCCAGAGCCCTACGTGAAGGTCCAGCTCATGCTGAA GCCCTCCCAGAGCCCTACGTTAAGGTCCAGCTCATGCTGAA Direct Gain 0 0.964778021790844 0 0.999928116798401 prediction 0.929556043581689 Functional Gain - SYT8 ENSG00000149043 CDS Human protein_coding chr11:1858197 chr11:1858197 synonymous SNV . 0 21 hPsi_associated_SNPs_103375 0 0 0 0 1 exosome 0 0.438718567874901 0.999856233596802 0 hPsi_site_2335 iPseU_CNN:0.999856233596802;iRNA_PseU:0 2336 chr12 38721405 38721405 1 + G A rs12305897 38721405 - 38721385 38721425 41 GAATATGACGGTCAAAAACTCACAGGCTTGGGAGTCATACC GAATATGACGGTCAAAAACTTACAGGCTTGGGAGTCATACC Direct Gain 0 0.964763241029625 0 0.996551632881165 prediction 0.929526482059249 Functional Gain - ALG10B ENSG00000175548;ENSG00000256878 intergenic Human other chr12:38721405 chr12:38721405 . . 0 21 hPsi_associated_SNPs_103376 0 0 0 0 0 Nucleus 0 0.438718594937027 0.99310326576233 0 hPsi_site_2336 iPseU_CNN:0.99310326576233;iRNA_PseU:0 2337 chr11 123894140 123894140 1 + G A BRCA 123894140 - 123894120 123894160 41 AGTGCTGGTGGCCAGGAGGGCACATCTGCTCCCACTCATCA AGTGCTGGTGGCCAGGAGGGTACATCTGCTCCCACTCATCA Direct Gain 0 0.964761019235369 0 0.969848096370697 prediction 0.929522038470737 Functional Gain - OR10G9 ENSG00000236981 CDS Human protein_coding chr11:123894140 chr11:123894140 nonsynonymous SNV 0.231 0 21 hPsi_associated_SNPs_103377 0 0 0 0 0 unknown 0 0.438720295682763 0.939696192741394 0 hPsi_site_2337 iPseU_CNN:0.939696192741394;iRNA_PseU:0 2338 chr15 74166053 74166053 1 + G A LUSC 74166053 - 74166033 74166073 41 TTTTCAGGAGAGAGGGTGGTCATGGCCCCTGCTGTCTTCCG TTTTCAGGAGAGAGGGTGGTTATGGCCCCTGCTGTCTTCCG Direct Gain 0 0.964745288057732 0 0.0222308039665222 prediction 0.929490576115463 Functional Gain - TBC1D21 ENSG00000167139 CDS Human protein_coding chr15:74166053 chr15:74166053 nonsynonymous SNV 0.978 2 21 hPsi_associated_SNPs_103378 0 0 0 0 0 exosome 0 0.438675244992933 0 0 hPsi_site_2338 iPseU_CNN:0;iRNA_PseU:0 2339 chr1 1267838 1267838 1 + C T STAD 1267838 + 1267818 1267858 41 TGGCTGACCTCTGACCTGGTCATGGGGCTGCCCGGCATGGC TGGCTGACCTCTGACCTGGTTATGGGGCTGCCCGGCATGGC Direct Gain 0 0.9647411301408 0 0.864610314369202 prediction 0.9294822602816 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1267838 chr1:1267838 synonymous SNV . 0 21 hPsi_associated_SNPs_103379 0 0 0 0 0 chromatin 0 0.438718785487854 0.729220628738404 0 hPsi_site_2339 iPseU_CNN:0.729220628738404;iRNA_PseU:0 2340 chr6 106553754 106553754 1 + C A UCEC 106553754 - 106553734 106553774 41 CAAACGTTGCATTCGTACTTGATCTTGCCGTTCTGCTTCTT CAAACGTTGCATTCGTACTTTATCTTGCCGTTCTGCTTCTT Direct Gain 0 0.964728161501997 0 0.998997390270233 prediction 0.929456323003994 Functional Gain - PRDM1 ENSG00000057657 CDS Human protein_coding chr6:106553754 chr6:106553754 synonymous SNV . 0 21 hPsi_associated_SNPs_103380 0 0 0 0 0 cytosol 0 0.43871801443477 0.997994780540466 0 hPsi_site_2340 iPseU_CNN:0.997994780540466;iRNA_PseU:0 2341 chr19 48343581 48343581 1 + C T rs140211833 48343581 + 48343561 48343601 41 ATTTGGGGTCATGTTTAGGTCAGAATCACCGTGCCCTTGAA ATTTGGGGTCATGTTTAGGTTAGAATCACCGTGCCCTTGAA Direct Gain 0 0.964727740118408 0 0.999999165534973 prediction 0.929455480236815 Functional Gain - CRX ENSG00000105392 UTR3 Human protein_coding chr19:48343581 chr19:48343581 . . 0 21 hPsi_associated_SNPs_103381 0 0 0 2 0 Nucleus 0 0.438718594005 0.999998331069946 0 hPsi_site_2341 iPseU_CNN:0.999998331069946;iRNA_PseU:0 2342 chr1 247592939 247592939 1 + C T COAD 247592939 + 247592919 247592959 41 GCCGGGGCCTCTTTTCAGTTCTGAGCACCAGCCAGAGTCTA GCCGGGGCCTCTTTTCAGTTTTGAGCACCAGCCAGAGTCTA Direct Gain 0 0.964719704095339 0 0.99989640712738 prediction 0.929439408190679 Functional Gain - NLRP3 ENSG00000162711 CDS Human protein_coding chr1:247592939 chr1:247592939 synonymous SNV . 0 21 hPsi_associated_SNPs_103382 0 0 0 0 1 Nucleus 0 0.438718592936776 0.99979281425476 0 hPsi_site_2342 iPseU_CNN:0.99979281425476;iRNA_PseU:0 2343 chr18 76973981 76973981 1 + C A COAD 76973981 - 76973961 76974001 41 GTCTCTTTTCCGGTATAAATGACAACACCTATTACAGTACC GTCTCTTTTCCGGTATAAATTACAACACCTATTACAGTACC Direct Gain 0 0.964718046874186 0 0.456715911626816 prediction 0.929436093748371 Functional Gain - ATP9B ENSG00000166377 CDS Human protein_coding chr18:76973981 chr18:76973981 synonymous SNV . 0 21 hPsi_associated_SNPs_103383 0 0 0 0 0 Endoplasmic reticulum 0 0.43871966364833 0 0 hPsi_site_2343 iPseU_CNN:0;iRNA_PseU:0 2344 chr13 111947494 111947494 1 + A T rs182200658 111947494 + 111947474 111947514 41 TGAAGTGTTTGTTTTATATTAAAAAAAACCTGTTATGTACA TGAAGTGTTTGTTTTATATTTAAAAAAACCTGTTATGTACA Direct Gain 0 0.964685465139108 0 0.996621608734131 prediction 0.929370930278216 Functional Gain - ARHGEF7 ENSG00000102606 UTR3 Human protein_coding chr13:111947494 chr13:111947494 . . 0 21 hPsi_associated_SNPs_103384 0 0 1 0 0 Nucleus 0 0.434061279291643 0.993243217468262 0 hPsi_site_2344 iPseU_CNN:0.993243217468262;iRNA_PseU:0 2345 chr11 71849992 71849992 1 + G A UCEC 71849992 - 71849972 71850012 41 ACTGCACTGGGTGGGGAAGACACAGGACTAAGTCTCTCCCC ACTGCACTGGGTGGGGAAGATACAGGACTAAGTCTCTCCCC Direct Gain 0 0.964685325769079 0 0.985302925109863 prediction 0.929370651538159 Functional Gain - FOLR3 ENSG00000110203 CDS Human protein_coding chr11:71849992 chr11:71849992 synonymous SNV . 0 21 hPsi_associated_SNPs_103385 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592111822 0.970605850219726 0 hPsi_site_2345 iPseU_CNN:0.970605850219726;iRNA_PseU:0 2346 chr1 232941153 232941153 1 + C T rs12409898 232941153 + 232941133 232941173 41 AGACCCCGGGGCTTCAGCTTCTCGTTTGCGGAGCCCGCGGC AGACCCCGGGGCTTCAGCTTTTCGTTTGCGGAGCCCGCGGC Direct Gain 0 0.964676345196994 0 0.987897872924805 prediction 0.929352690393987 Functional Gain - MAP10 ENSG00000212916 CDS Human protein_coding chr1:232941153 chr1:232941153 synonymous SNV . 0 21 hPsi_associated_SNPs_103386 0 0 0 0 0 exosome 0 0.438718593018419 0.97579574584961 0 hPsi_site_2346 iPseU_CNN:0.97579574584961;iRNA_PseU:0 2347 chr19 14030741 14030741 1 + G A UCEC 14030741 - 14030721 14030761 41 CTTAGGCACCTCATCCTCTTCATCCTCTGGGCCTTCATCCT CTTAGGCACCTCATCCTCTTTATCCTCTGGGCCTTCATCCT Direct Gain 0 0.964668907024155 0 0.927518546581268 prediction 0.92933781404831 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14030741 chr19:14030741 nonsynonymous SNV 0.990 1 21 hPsi_associated_SNPs_103387 0 0 0 0 0 chromatin 0 0.438718557464676 0.855037093162536 0 hPsi_site_2347 iPseU_CNN:0.855037093162536;iRNA_PseU:0 2348 chr8 92307811 92307811 1 + C A LUSC 92307811 - 92307791 92307831 41 AGATTCTGCATGTTCTGAGGGACAATCCGTTCCACGGCGTT AGATTCTGCATGTTCTGAGGTACAATCCGTTCCACGGCGTT Direct Gain 0 0.964661711877117 0 0.999946117401123 prediction 0.929323423754233 Functional Gain - SLC26A7 ENSG00000147606 CDS Human protein_coding chr8:92307811 chr8:92307811 synonymous SNV . 0 21 hPsi_associated_SNPs_103388 0 0 0 0 0 membrane 0 0.438719064810077 0.999892234802246 0 hPsi_site_2348 iPseU_CNN:0.999892234802246;iRNA_PseU:0 2349 chr19 55253559 55253559 1 + C T rs138174230 55253559 + 55253539 55253579 41 AGAGAAGGGAAGTTTAAGGACACTTTGCACCTCATTGGAGA AGAGAAGGGAAGTTTAAGGATACTTTGCACCTCATTGGAGA Direct Gain 0 0.964661711024663 0 0.788564920425415 prediction 0.929323422049327 Functional Gain - KIR2DL3 ENSG00000243772 CDS Human protein_coding chr19:55253559 chr19:55253559 synonymous SNV . 0 21 hPsi_associated_SNPs_103389 0 0 0 0 0 exosome 0 0.438720168225013 0.57712984085083 0 hPsi_site_2349 iPseU_CNN:0.57712984085083;iRNA_PseU:0 2350 chr16 81929479 81929479 1 + C T SKCM 81929479 + 81929459 81929499 41 TGGACGCGGACTACCAAGATCAAGTTTGACGACGTCGTGCA TGGACGCGGACTACCAAGATTAAGTTTGACGACGTCGTGCA Direct Gain 0 0.964658784951119 0 0.996914982795715 prediction 0.929317569902237 Functional Gain - PLCG2 ENSG00000197943 CDS Human protein_coding chr16:81929479 chr16:81929479 synonymous SNV . 0 21 hPsi_associated_SNPs_103390 0 0 0 0 2 Cytosol 0 0.438702808638333 0.99382996559143 0 hPsi_site_2350 iPseU_CNN:0.99382996559143;iRNA_PseU:0 2351 chrX 107069193 107069193 1 + G A rs555017789 107069193 - 107069173 107069213 41 AAGAAGAAGGGGTGCTCGGCCACCTTCCCAGGCTCACCTTC AAGAAGAAGGGGTGCTCGGCTACCTTCCCAGGCTCACCTTC Direct Gain 0 0.964652730497255 0 0.999998331069946 prediction 0.929305460994509 Functional Gain - MID2 ENSG00000080561 UTR5 Human protein_coding chrX:107069193 chrX:107069193 . . 0 21 hPsi_associated_SNPs_103391 0 0 0 0 0 nucleus 0 0.438718592966522 0.999996662139892 0 hPsi_site_2351 iPseU_CNN:0.999996662139892;iRNA_PseU:0 2352 chr5 140502601 140502601 1 + G T UCEC 140502601 + 140502581 140502621 41 TAGAGGTGGTGGATGTGAATGACAATCCCCCAGAACTTATC TAGAGGTGGTGGATGTGAATTACAATCCCCCAGAACTTATC Direct Gain 0 0.964643412334533 0 0.996145367622375 prediction 0.929286824669067 Functional Gain - PCDHB4 ENSG00000081818 CDS Human protein_coding chr5:140502601 chr5:140502601 nonsynonymous SNV 0.977 3 21 hPsi_associated_SNPs_103392 0 0 0 0 0 exosome 0 0.438721629795153 0.99229073524475 0 hPsi_site_2352 iPseU_CNN:0.99229073524475;iRNA_PseU:0 2353 chr5 54701406 54701406 1 + G T LUAD 54701406 + 54701386 54701426 41 TGAAAGGACGAGTGGCTTGTGAGATAAGCAGGTAAAATCTG TGAAAGGACGAGTGGCTTGTTAGATAAGCAGGTAAAATCTG Direct Gain 0 0.964632418232316 0 0.998705148696899 prediction 0.929264836464631 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54701406 chr5:54701406 stopgain 1.000 1 21 hPsi_associated_SNPs_103393 0 0 1 0 1 Nucleus 0 0.435374166470321 0.997410297393798 0 hPsi_site_2353 iPseU_CNN:0.997410297393798;iRNA_PseU:0 2354 chr17 78181958 78181958 1 + C T rs200640336 78181958 + 78181938 78181978 41 AAGGGCCTACAGCGGTTGGGCACCTCAGAGGAGCAGCTCCT AAGGGCCTACAGCGGTTGGGTACCTCAGAGGAGCAGCTCCT Direct Gain 0 0.964629066388712 0 0.99932199716568 prediction 0.929258132777424 Functional Gain - CARD14 ENSG00000141527 CDS Human protein_coding chr17:78181958 chr17:78181958 synonymous SNV . 0 21 hPsi_associated_SNPs_103394 0 0 0 0 1 nucleus 0 0.441015207135576 0.99864399433136 0 hPsi_site_2354 iPseU_CNN:0.99864399433136;iRNA_PseU:0 2355 chr3 130114188 130114188 1 + C A UCEC 130114188 - 130114168 130114208 41 ATTGCCTGTTATTGGCAGGAGATGTTCCTTATAAACATCTC ATTGCCTGTTATTGGCAGGATATGTTCCTTATAAACATCTC Direct Gain 0 0.96461666686737 0 0.999942064285278 prediction 0.929233333734739 Functional Gain - COL6A5 ENSG00000172752 CDS Human protein_coding chr3:130114188 chr3:130114188 nonsynonymous SNV 0.019 4 21 hPsi_associated_SNPs_103395 0 0 0 0 0 chromatin 0 0.438718608660475 0.999884128570556 0 hPsi_site_2355 iPseU_CNN:0.999884128570556;iRNA_PseU:0 2356 chr1 150116995 150116995 1 + C T COAD 150116995 + 150116975 150117015 41 AACGGTGGTTGGGGGAAGGGCACAGCTTCCTCTCTTGTCCC AACGGTGGTTGGGGGAAGGGTACAGCTTCCTCTCTTGTCCC Direct Gain 0 0.964609765162007 0 0.997459292411804 prediction 0.929219530324015 Functional Gain - VPS45 ENSG00000136631 CDS Human protein_coding chr1:150116995 chr1:150116995 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_103396 0 0 0 0 0 Nucleus 0 0.438718592995008 0.994918584823608 0 hPsi_site_2356 iPseU_CNN:0.994918584823608;iRNA_PseU:0 2357 chr19 42351701 42351701 1 + C A HNSC 42351701 - 42351681 42351721 41 CAGGATGAGGACACATTTGTGACACTCGCAAGCCTGGAAGA CAGGATGAGGACACATTTGTTACACTCGCAAGCCTGGAAGA Direct Gain 0 0.964606882436084 0 0.996895432472229 prediction 0.929213764872169 Functional Gain - DMRTC2 ENSG00000142025 CDS Human protein_coding chr19:42351701 chr19:42351701 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103397 0 0 0 0 0 exosome 0 0.438705242125079 0.993790864944458 0 hPsi_site_2357 iPseU_CNN:0.993790864944458;iRNA_PseU:0 2358 chr2 168107599 168107599 1 + G T LUSC 168107599 + 168107579 168107619 41 AGATAGAAACTCGTGGTAGGGACTCTCCACCTACAATCACA AGATAGAAACTCGTGGTAGGTACTCTCCACCTACAATCACA Direct Gain 0 0.964606743996562 0 1 prediction 0.929213487993124 Functional Gain - XIRP2 ENSG00000163092 CDS Human protein_coding chr2:168107599 chr2:168107599 nonsynonymous SNV 0.068 3 21 hPsi_associated_SNPs_103398 0 0 0 0 0 exosome 0 0.438697639688769 1 0 hPsi_site_2358 iPseU_CNN:1;iRNA_PseU:0 2359 chr1 246729672 246729672 1 + C A rs546376340 246729672 - 246729652 246729692 41 GGACACCAGCCGGATGGTCGGTCGCTCTCCTCAACGGTCCA GGACACCAGCCGGATGGTCGTTCGCTCTCCTCAACGGTCCA Direct Gain 0 0.964602142855165 0 0.999999821186066 prediction 0.929204285710331 Functional Gain - CNST ENSG00000162851;ENSG00000162852 upstream Human other chr1:246729672 chr1:246729672 . . 0 21 hPsi_associated_SNPs_103399 0 0 0 0 0 Ribosome 0 0.440803425740352 0.999999642372132 0 hPsi_site_2359 iPseU_CNN:0.999999642372132;iRNA_PseU:0 2360 chr2 187371464 187371464 1 + G A LUSC 187371464 - 187371444 187371484 41 GTACAGGCTTAAATCTATGTCATTTACACTCACTGAATCAT GTACAGGCTTAAATCTATGTTATTTACACTCACTGAATCAT Direct Gain 0 0.96459932925527 0 0.968225002288818 prediction 0.929198658510539 Functional Gain - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187371464 chr2:187371464 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103400 0 0 0 0 0 Ribosome 0 0.43720086858953 0.936450004577636 0 hPsi_site_2360 iPseU_CNN:0.936450004577636;iRNA_PseU:0 2361 chr3 3887126 3887126 1 + C T SKCM 3887126 + 3887106 3887146 41 AAAGTTCCAAATTTGAAATTCTTAGACCTCAACAAAAACCC AAAGTTCCAAATTTGAAATTTTTAGACCTCAACAAAAACCC Direct Gain 0 0.964596198736306 0 0.596510350704193 prediction 0.929192397472613 Functional Gain - LRRN1 ENSG00000175928 CDS Human protein_coding chr3:3887126 chr3:3887126 synonymous SNV . 0 21 hPsi_associated_SNPs_103401 0 0 0 0 0 Cytosol 0 0.438718591266667 0.193020701408386 0 hPsi_site_2361 iPseU_CNN:0.193020701408386;iRNA_PseU:0 2362 chr12 72338095 72338095 1 + C T SKCM 72338095 + 72338075 72338115 41 AAAAACGTGTCAACATGGTTCATATTGAATCCAGGAAATCT AAAAACGTGTCAACATGGTTTATATTGAATCCAGGAAATCT Direct Gain 0 0.964589260289384 0 0.02940434217453 prediction 0.929178520578769 Functional Gain - TPH2 ENSG00000139287 CDS Human protein_coding chr12:72338095 chr12:72338095 nonsynonymous SNV 0.991 5 21 hPsi_associated_SNPs_103402 0 0 0 0 1 exosome 0 0.438226734632298 0 0 hPsi_site_2362 iPseU_CNN:0;iRNA_PseU:0 2363 chr15 85400519 85400519 1 + G A UCEC 85400519 - 85400499 85400539 41 AGAGGACAGCCACCCTGATCCATACACGGCACTCCCCCTGG AGAGGACAGCCACCCTGATCTATACACGGCACTCCCCCTGG Direct Gain 0 0.964587856290668 0 0.999998927116394 prediction 0.929175712581336 Functional Gain - ALPK3 ENSG00000136383 CDS Human protein_coding chr15:85400519 chr15:85400519 nonsynonymous SNV 0.024 1 21 hPsi_associated_SNPs_103403 0 0 0 0 0 exosome 0 0.43869716272393 0.999997854232788 0 hPsi_site_2363 iPseU_CNN:0.999997854232788;iRNA_PseU:0 2364 chr3 142503602 142503602 1 + G A UCEC 142503602 - 142503582 142503622 41 GGCTTGCGTCGGTAACCCGACATCTGTCCAAACCAAACAGT GGCTTGCGTCGGTAACCCGATATCTGTCCAAACCAAACAGT Direct Gain 0 0.964579175472211 0 0.999999165534973 prediction 0.929158350944423 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142503602 chr3:142503602 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103404 0 0 0 0 0 Ribosome 0 0.438727341703652 0.999998331069946 0 hPsi_site_2364 iPseU_CNN:0.999998331069946;iRNA_PseU:0 2365 chr5 140516039 140516039 1 + C A BRCA 140516039 - 140516019 140516059 41 ATGGTGAGTTCAGGGGCGTTGTCATTCACATCCACCACTTC ATGGTGAGTTCAGGGGCGTTTTCATTCACATCCACCACTTC Direct Gain 0 0.964576381016626 0 0.947577476501465 prediction 0.929152762033252 Functional Gain - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140516039 chr5:140516039 nonsynonymous SNV 0.979 3 21 hPsi_associated_SNPs_103405 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859840083 0.89515495300293 0 hPsi_site_2365 iPseU_CNN:0.89515495300293;iRNA_PseU:0 2366 chr18 76753491 76753491 1 + C T rs7233194 76753491 + 76753471 76753511 41 TGCTCGGGCATCCCCTACGGCATGTCGCTGCCCCCCGAGAA TGCTCGGGCATCCCCTACGGTATGTCGCTGCCCCCCGAGAA Direct Gain 0 0.964575676437116 0 0.999211728572845 prediction 0.929151352874232 Functional Gain - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76753491 chr18:76753491 synonymous SNV . 0 21 hPsi_associated_SNPs_103406 0 0 0 0 0 exosome 0 0.438718593014907 0.99842345714569 0 hPsi_site_2366 iPseU_CNN:0.99842345714569;iRNA_PseU:0 2367 chr20 60348084 60348084 1 + C T rs34937312 60348084 + 60348064 60348104 41 GAAAGGAAAGAAGGTCGTGGCTCTGGACCCCTCTCCGCCTC GAAAGGAAAGAAGGTCGTGGTTCTGGACCCCTCTCCGCCTC Direct Gain 0 0.964574753887437 0 0.991592645645142 prediction 0.929149507774873 Functional Gain - CDH4 ENSG00000179242 CDS Human protein_coding chr20:60348084 chr20:60348084 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103407 0 0 0 0 1 exosome 0 0.438375389401147 0.983185291290284 0 hPsi_site_2367 iPseU_CNN:0.983185291290284;iRNA_PseU:0 2368 chr17 7401049 7401049 1 + G A BLCA 7401049 - 7401029 7401069 41 AAGTCCACTCTTTTGCCCATCAGGTTCCCTCGCACCCGGCC AAGTCCACTCTTTTGCCCATTAGGTTCCCTCGCACCCGGCC Direct Gain 0 0.964566776697359 0 0.978773474693298 prediction 0.929133553394718 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7401049 chr17:7401049 synonymous SNV . 0 21 hPsi_associated_SNPs_103408 0 0 0 0 0 Nucleus 0 0.438718592994938 0.957546949386596 0 hPsi_site_2368 iPseU_CNN:0.957546949386596;iRNA_PseU:0 2369 chr5 134331971 134331971 1 + G T COAD 134331971 + 134331951 134331991 41 CTACCCCTGTAGTTCTCGGAGATCTTCTTTGTGTCCATCTG CTACCCCTGTAGTTCTCGGATATCTTCTTTGTGTCCATCTG Direct Gain 0 0.964548668203095 0 0.831513166427612 prediction 0.929097336406191 Functional Gain - CATSPER3 ENSG00000152705 CDS Human protein_coding chr5:134331971 chr5:134331971 nonsynonymous SNV 0.022 2 21 hPsi_associated_SNPs_103409 0 0 1 0 1 cytosol 0 0.438837826076917 0.663026332855224 0 hPsi_site_2369 iPseU_CNN:0.663026332855224;iRNA_PseU:0 2370 chr12 120556554 120556554 1 + C T rs77651878 120556554 + 120556534 120556574 41 CTTTGTGATCTTAGGTAAGTCACATCACACTATCTCAAAGC CTTTGTGATCTTAGGTAAGTTACATCACACTATCTCAAAGC Direct Gain 0 0.96452954285878 0 0.999996542930603 prediction 0.92905908571756 Functional Gain - RAB35;GCN1 ENSG00000111737;ENSG00000089154 intergenic Human other chr12:120556554 chr12:120556554 . . 0 21 hPsi_associated_SNPs_103410 0 0 0 0 0 unknown 0 0.438576649580686 0.999993085861206 0 hPsi_site_2370 iPseU_CNN:0.999993085861206;iRNA_PseU:0 2371 chr12 66638970 66638970 1 + C A UCEC 66638970 - 66638950 66638990 41 AAACAGAAGAGCTTGGCAGAGAAATTCCGAGGGCAGGGAGG AAACAGAAGAGCTTGGCAGATAAATTCCGAGGGCAGGGAGG Direct Gain 0 0.964518087589587 0 0.888311862945557 prediction 0.929036175179175 Functional Gain - IRAK3 ENSG00000090376 CDS Human protein_coding chr12:66638970 chr12:66638970 nonsynonymous SNV 0.931 1 21 hPsi_associated_SNPs_103411 0 0 0 0 0 exosome 0 0.438718592996193 0.776623725891114 0 hPsi_site_2371 iPseU_CNN:0.776623725891114;iRNA_PseU:0 2372 chr17 36619596 36619596 1 + G A LIHC 36619596 - 36619576 36619616 41 AGGATGTCCTCGTCCTTGGGCATGATAGACAGCTCCAGAGT AGGATGTCCTCGTCCTTGGGTATGATAGACAGCTCCAGAGT Direct Gain 0 0.964517788789797 0 0.999998688697815 prediction 0.929035577579594 Functional Gain - ARHGAP23 ENSG00000225485 CDS Human other chr17:36619596 chr17:36619596 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103412 0 0 0 0 0 nucleus 0 0.43872267851972 0.99999737739563 0 hPsi_site_2372 iPseU_CNN:0.99999737739563;iRNA_PseU:0 2373 chr1 233482307 233482307 1 + G A COAD 233482307 - 233482287 233482327 41 CACTTCGGGGGCCATCCAGGCATAGGTGCCTGCTGTGCTCA CACTTCGGGGGCCATCCAGGTATAGGTGCCTGCTGTGCTCA Direct Gain 0 0.964508547092001 0 0.999686002731323 prediction 0.929017094184002 Functional Gain - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233482307 chr1:233482307 nonsynonymous SNV 0.996 5 21 hPsi_associated_SNPs_103413 0 0 0 0 0 unknown 0 0.438793131767852 0.999372005462646 0 hPsi_site_2373 iPseU_CNN:0.999372005462646;iRNA_PseU:0 2374 chr1 160326392 160326392 1 + G T BLCA 160326392 + 160326372 160326412 41 CCTTTGGTCTGCACTCAGGTGACGGGCCTCTTCAACATTAC CCTTTGGTCTGCACTCAGGTTACGGGCCTCTTCAACATTAC Direct Gain 0 0.964493790836452 0 0.999990999698639 prediction 0.928987581672904 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160326392 chr1:160326392 nonsynonymous SNV 0.456 4 21 hPsi_associated_SNPs_103414 0 0 1 0 1 Endoplasmic reticulum 0 0.438581369261863 0.999981999397278 0 hPsi_site_2374 iPseU_CNN:0.999981999397278;iRNA_PseU:0 2375 chr7 117250606 117250606 1 + G A GBM 117250606 - 117250586 117250626 41 GTAGGGTTGTAAAACTGCGACAACTGCTATAGCTCCAATCA GTAGGGTTGTAAAACTGCGATAACTGCTATAGCTCCAATCA Direct Gain 0 0.964481008872136 0 0.999992370605469 prediction 0.928962017744273 Functional Gain - CFTR ENSG00000001626 CDS Human protein_coding chr7:117250606 chr7:117250606 nonsynonymous SNV 0.011 2 21 hPsi_associated_SNPs_103415 0 0 0 0 0 exosome 0 0.438510475692307 0.999984741210938 0 hPsi_site_2375 iPseU_CNN:0.999984741210938;iRNA_PseU:0 2376 chr6 25983459 25983459 1 + G T UCEC 25983459 + 25983439 25983479 41 TCTGAGGATCGGAGACAAGTGACTCGTGGATACACCCAGGA TCTGAGGATCGGAGACAAGTTACTCGTGGATACACCCAGGA Direct Gain 0 0.964455803907982 0 0.999999761581421 prediction 0.928911607815965 Functional Gain - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983459 chr6:25983459 synonymous SNV . 0 21 hPsi_associated_SNPs_103416 0 0 1 0 1 Cytosol 0 0.440835371884419 0.999999523162842 0 hPsi_site_2376 iPseU_CNN:0.999999523162842;iRNA_PseU:0 2377 chrX 47070524 47070524 1 + C T rs2228658 47070524 + 47070504 47070544 41 CAGGACCGAGCTGCTGTGGCCACATTCCTGCAGTCTGTGCA CAGGACCGAGCTGCTGTGGCTACATTCCTGCAGTCTGTGCA Direct Gain 0 0.964452535215612 0 0.999999046325684 prediction 0.928905070431223 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47070524 chrX:47070524 synonymous SNV . 0 21 hPsi_associated_SNPs_103417 2 0 1 0 1 Nucleus 0 0.436011910740962 0.999998092651368 0 hPsi_site_2377 iPseU_CNN:0.999998092651368;iRNA_PseU:0 2378 chr10 123846789 123846789 1 + G A ESCA 123846789 - 123846769 123846809 41 CTTTCCAGAAGGAATTCTGTCTTGGGCCACGGCCTCTTCTC CTTTCCAGAAGGAATTCTGTTTTGGGCCACGGCCTCTTCTC Direct Gain 0 0.964450751188932 0 0.999952554702759 prediction 0.928901502377864 Functional Gain - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123846789 chr10:123846789 nonsynonymous SNV 0.029 1 21 hPsi_associated_SNPs_103418 0 0 0 0 0 Cytoplasm 0 0.438718592995098 0.999905109405518 0 hPsi_site_2378 iPseU_CNN:0.999905109405518;iRNA_PseU:0 2379 chr1 201859588 201859588 1 + G A LUSC 201859588 - 201859568 201859608 41 GAGGCGATGCCTGCTATGGTCTTGGGGCTTTAGACAAAGAA GAGGCGATGCCTGCTATGGTTTTGGGGCTTTAGACAAAGAA Direct Gain 0 0.964449787360981 0 0.996030330657959 prediction 0.928899574721961 Functional Gain - SHISA4 ENSG00000198892 CDS Human protein_coding chr1:201859588 chr1:201859588 synonymous SNV . 0 21 hPsi_associated_SNPs_103419 0 0 0 0 0 Endoplasmic reticulum 0 0.43871860399911 0.992060661315918 0 hPsi_site_2379 iPseU_CNN:0.992060661315918;iRNA_PseU:0 2380 chr4 184930426 184930426 1 + C T SKCM 184930426 + 184930406 184930446 41 GTGACCCCACAGACTTATTTCATAACTCCTTCCCTCATAAG GTGACCCCACAGACTTATTTTATAACTCCTTCCCTCATAAG Direct Gain 0 0.964445854541077 0 0.932947158813477 prediction 0.928891709082155 Functional Gain - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184930426 chr4:184930426 synonymous SNV . 0 21 hPsi_associated_SNPs_103420 0 0 1 0 0 exosome 0 0.438718593833353 0.865894317626954 0 hPsi_site_2380 iPseU_CNN:0.865894317626954;iRNA_PseU:0 2381 chr8 110437383 110437383 1 + C T SKCM 110437383 + 110437363 110437403 41 GGCCAGGCGAGTCAAAAATTCATATTCAAAGAATTCAAGCT GGCCAGGCGAGTCAAAAATTTATATTCAAAGAATTCAAGCT Direct Gain 0 0.964423540435074 0 0.995841979980469 prediction 0.928847080870148 Functional Gain - PKHD1L1 ENSG00000205038 CDS Human protein_coding chr8:110437383 chr8:110437383 nonsynonymous SNV 0.977 1 21 hPsi_associated_SNPs_103421 0 0 0 0 2 exosome 0 0.438718533124336 0.991683959960938 0 hPsi_site_2381 iPseU_CNN:0.991683959960938;iRNA_PseU:0 2382 chr2 234102540 234102540 1 + G T LUAD 234102540 + 234102520 234102560 41 CTCACCCACCATGGGGAGTTGACAGGCCACTTCCAGGGGGA CTCACCCACCATGGGGAGTTTACAGGCCACTTCCAGGGGGA Direct Gain 0 0.964422211822867 0 0.997370839118958 prediction 0.928844423645735 Functional Gain - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234102540 chr2:234102540 nonsynonymous SNV 0.945 2 21 hPsi_associated_SNPs_103422 0 0 0 0 2 Cytosol 0 0.438718592993031 0.994741678237916 0 hPsi_site_2382 iPseU_CNN:0.994741678237916;iRNA_PseU:0 2383 chr19 49414506 49414506 1 + G A STAD 49414506 - 49414486 49414526 41 GGACCCACTCCCATTACCGTCTGGATCAGCAGCTCCAGGTC GGACCCACTCCCATTACCGTTTGGATCAGCAGCTCCAGGTC Direct Gain 0 0.964422148345552 0 0.978944063186646 prediction 0.928844296691104 Functional Gain - NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49414506 chr19:49414506 synonymous SNV . 0 21 hPsi_associated_SNPs_103423 0 0 0 0 0 Ribosome 0 0.438688692167965 0.957888126373292 0 hPsi_site_2383 iPseU_CNN:0.957888126373292;iRNA_PseU:0 2384 chr6 32613011 32613011 1 + G A rs9273151 32613011 - 32612991 32613031 41 ACACTCTGCTCCCACACATGCATAGCCTCCCCCATTAGCAA ACACTCTGCTCCCACACATGTATAGCCTCCCCCATTAGCAA Direct Gain 0 0.964403111850833 0 0.358146905899048 prediction 0.928806223701667 Functional Gain - HLA-DQA1;HLA-DQB1 ENSG00000196735;ENSG00000179344 intergenic Human other chr6:32613011 chr6:32613011 . . 0 21 hPsi_associated_SNPs_103424 0 0 0 0 0 unknown 0 0.438723939521457 0 0 hPsi_site_2384 iPseU_CNN:0;iRNA_PseU:0 2385 chr11 49597897 49597897 1 + G T LUAD 49597897 + 49597877 49597917 41 TGGTGGCTCACATGCTGGGTGACATCATTATTGGAGCTCTC TGGTGGCTCACATGCTGGGTTACATCATTATTGGAGCTCTC Direct Gain 0 0.96440108545815 0 0.977612376213074 prediction 0.928802170916299 Functional Gain - LOC440040 ENSG00000205035 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:49597897 chr11:49597897 . . 0 21 hPsi_associated_SNPs_103425 0 0 0 0 0 unknown 0 0.438706381915575 0.955224752426148 0 hPsi_site_2385 iPseU_CNN:0.955224752426148;iRNA_PseU:0 2386 chr6 29142018 29142018 1 + C T SKCM 29142018 + 29141998 29142038 41 AATGAGCTGACCCTCATGGTCATGAGCTCCATTTTTGTTCT AATGAGCTGACCCTCATGGTTATGAGCTCCATTTTTGTTCT Direct Gain 0 0.96439661979082 0 0.991341531276703 prediction 0.928793239581641 Functional Gain - OR2J2 ENSG00000204700 CDS Human protein_coding chr6:29142018 chr6:29142018 synonymous SNV . 0 21 hPsi_associated_SNPs_103426 0 0 0 0 0 unknown 0 0.438637986009893 0.982683062553406 0 hPsi_site_2386 iPseU_CNN:0.982683062553406;iRNA_PseU:0 2387 chr16 46723645 46723645 1 + G A rs574592042 46723645 - 46723625 46723665 41 GGCGAGGCCCAGGCGCGGGGCTAGGCGCCCGATCAGCTCCG GGCGAGGCCCAGGCGCGGGGTTAGGCGCCCGATCAGCTCCG Direct Gain 0 0.964393984681484 0 0.359092712402344 prediction 0.928787969362968 Functional Gain - ORC6 ENSG00000091651 CDS Human protein_coding chr16:46723645 chr16:46723645 nonsynonymous SNV 0.011 4 21 hPsi_associated_SNPs_103427 0 0 0 0 0 Cytosol 0 0.438718590744576 0 0 hPsi_site_2387 iPseU_CNN:0;iRNA_PseU:0 2388 chr5 73069858 73069858 1 + C A LIHC 73069858 - 73069838 73069878 41 AGTAGCTAAACTCACTTTGTGACGTCTTCCACCAGCTTGGA AGTAGCTAAACTCACTTTGTTACGTCTTCCACCAGCTTGGA Direct Gain 0 0.964387419452362 0 0.99711275100708 prediction 0.928774838904724 Functional Gain - ARHGEF28 ENSG00000214944 CDS Human protein_coding chr5:73069858 chr5:73069858 synonymous SNV . 0 21 hPsi_associated_SNPs_103428 0 0 0 0 0 cytosol 0 0.438717566893738 0.99422550201416 0 hPsi_site_2388 iPseU_CNN:0.99422550201416;iRNA_PseU:0 2389 chr19 1524137 1524137 1 + G T rs547281921 1524137 + 1524117 1524157 41 GGCTGCGCCAGAGTCCGCGCGATGGAGCCCCGGCCGCGGCG GGCTGCGCCAGAGTCCGCGCTATGGAGCCCCGGCCGCGGCG Direct Gain 0 0.964386853280503 0 0.989791631698608 prediction 0.928773706561007 Functional Gain - PLK5 ENSG00000185988 UTR5 Human protein_coding chr19:1524137 chr19:1524137 . . 0 21 hPsi_associated_SNPs_103429 0 0 0 0 0 exosome 0 0.43866989443168 0.979583263397216 0 hPsi_site_2389 iPseU_CNN:0.979583263397216;iRNA_PseU:0 2390 chr2 24881562 24881562 1 + G T LIHC 24881562 + 24881542 24881582 41 TCAACATGAGTGGCCTCGGGGACAGTTCATCCGACCCTGCT TCAACATGAGTGGCCTCGGGTACAGTTCATCCGACCCTGCT Direct Gain 0 0.964377538621737 0 0.992844641208649 prediction 0.928755077243474 Functional Gain - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24881562 chr2:24881562 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103430 0 0 1 0 2 Cytosol 0 0.440022601502074 0.985689282417298 0 hPsi_site_2390 iPseU_CNN:0.985689282417298;iRNA_PseU:0 2391 chr3 140281691 140281691 1 + C T SKCM 140281691 + 140281671 140281711 41 GCTATGAGCAGGTGCTACATCACATCCGCTACCGCAACTGG GCTATGAGCAGGTGCTACATTACATCCGCTACCGCAACTGG Direct Gain 0 0.96435883541826 0 0.999176323413849 prediction 0.928717670836519 Functional Gain - CLSTN2 ENSG00000158258 CDS Human protein_coding chr3:140281691 chr3:140281691 nonsynonymous SNV 0.977 1 21 hPsi_associated_SNPs_103431 0 0 0 0 1 exosome 0 0.438717845766127 0.998352646827698 0 hPsi_site_2391 iPseU_CNN:0.998352646827698;iRNA_PseU:0 2392 chr1 210613035 210613035 1 + G A rs369192965 210613035 - 210613015 210613055 41 CAAGAGAAGCAGATTTTCTTCATCTCTCCTGCTCATCACGC CAAGAGAAGCAGATTTTCTTTATCTCTCCTGCTCATCACGC Direct Gain 0 0.964354093173863 0 0.29862505197525 prediction 0.928708186347725 Functional Gain - HHAT ENSG00000054392 UTR5 Human protein_coding chr1:210613035 chr1:210613035 . . 0 21 hPsi_associated_SNPs_103432 0 0 0 0 0 nucleolus 0 0.438718390492346 0 0 hPsi_site_2392 iPseU_CNN:0;iRNA_PseU:0 2393 chr16 76350318 76350318 1 + G A STAD 76350318 - 76350298 76350338 41 GGCAGACACAAGAGGATCATCACAGTCATCTGCCAGGAGGA GGCAGACACAAGAGGATCATTACAGTCATCTGCCAGGAGGA Direct Gain 0 0.964343159885373 0 0.989680111408234 prediction 0.928686319770746 Functional Gain - CNTNAP4 ENSG00000152910 CDS Human protein_coding chr16:76350318 chr16:76350318 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103433 0 0 0 0 0 exosome 0 0.439532370694008 0.979360222816468 0 hPsi_site_2393 iPseU_CNN:0.979360222816468;iRNA_PseU:0 2394 chr20 30486328 30486328 1 + G T LUSC 30486328 + 30486308 30486348 41 CCCTCATGAACACACTCATGGACGTCCTTCGCCACAGGCCA CCCTCATGAACACACTCATGTACGTCCTTCGCCACAGGCCA Direct Gain 0 0.964336414169065 0 0.995911955833435 prediction 0.92867282833813 Functional Gain - TTLL9 ENSG00000131044 CDS Human protein_coding chr20:30486328 chr20:30486328 nonsynonymous SNV 0.912 4 21 hPsi_associated_SNPs_103434 0 0 0 0 2 exosome 0 0.441197999290117 0.99182391166687 0 hPsi_site_2394 iPseU_CNN:0.99182391166687;iRNA_PseU:0 2395 chr16 76555988 76555988 1 + C T LUSC 76555988 + 76555968 76556008 41 GGGAATGGGCCTTTTGAAATCTCAGTGCAGTCACCCACCCA GGGAATGGGCCTTTTGAAATTTCAGTGCAGTCACCCACCCA Direct Gain 0 0.964336217559008 0 0.339026480913162 prediction 0.928672435118016 Functional Gain - CNTNAP4 ENSG00000152910 CDS Human protein_coding chr16:76555988 chr16:76555988 synonymous SNV . 0 21 hPsi_associated_SNPs_103435 0 0 0 0 1 exosome 0 0.438718599030728 0 0 hPsi_site_2395 iPseU_CNN:0;iRNA_PseU:0 2396 chr18 14090175 14090175 1 + C T rs142338768 14090175 + 14090155 14090195 41 GAAACTGACTTTACATAAGGCATGAAAAGCAGCCTGCGGAA GAAACTGACTTTACATAAGGTATGAAAAGCAGCCTGCGGAA Direct Gain 0 0.964333135700133 0 0.913753092288971 prediction 0.928666271400266 Functional Gain - MC2R;ZNF519 ENSG00000267150 ncRNA_exonic Human antisense chr18:14090175 chr18:14090175 . . 0 21 hPsi_associated_SNPs_103436 0 0 0 0 0 unknown 0 0.438718592950182 0.827506184577942 0 hPsi_site_2396 iPseU_CNN:0.827506184577942;iRNA_PseU:0 2397 chr11 22396423 22396423 1 + G A SKCM 22396423 - 22396403 22396443 41 ATGTACTTACCACCACAATTCATGATCTTTCTCACTGTCGT ATGTACTTACCACCACAATTTATGATCTTTCTCACTGTCGT Direct Gain 0 0.964330915705801 0 0.515382587909698 prediction 0.928661831411603 Functional Gain - SLC17A6 ENSG00000091664 CDS Human protein_coding chr11:22396423 chr11:22396423 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103437 0 0 0 0 0 unknown 0 0.438681071834694 0.0307651758193961 0 hPsi_site_2397 iPseU_CNN:0.0307651758193961;iRNA_PseU:0 2398 chrX 9682980 9682980 1 + C T rs199871538 9682980 + 9682960 9683000 41 AGCTACCGAGGCACTGGCGGCATCTTCGAGGTGTGCTGGAA AGCTACCGAGGCACTGGCGGTATCTTCGAGGTGTGCTGGAA Direct Gain 0 0.964329212041279 0 0.99587070941925 prediction 0.928658424082557 Functional Gain - TBL1X ENSG00000101849 CDS Human protein_coding chrX:9682980 chrX:9682980 synonymous SNV . 0 21 hPsi_associated_SNPs_103438 0 0 1 0 1 Cytosol 0 0.438718468856007 0.9917414188385 0 hPsi_site_2398 iPseU_CNN:0.9917414188385;iRNA_PseU:0 2399 chr5 118970154 118970154 1 + C T ACC 118970154 + 118970134 118970174 41 ATGGCCTGCTGCCGGGTGTTCACCACCATGGAAGCCCTCCA ATGGCCTGCTGCCGGGTGTTTACCACCATGGAAGCCCTCCA Direct Gain 0 0.964320363517925 0 0.997460246086121 prediction 0.928640727035849 Functional Gain - FAM170A ENSG00000164334 CDS Human protein_coding chr5:118970154 chr5:118970154 synonymous SNV . 0 21 hPsi_associated_SNPs_103439 0 0 0 0 0 exosome 0 0.438718812920185 0.994920492172242 0 hPsi_site_2399 iPseU_CNN:0.994920492172242;iRNA_PseU:0 2400 chr4 113350325 113350325 1 + C A SKCM 113350325 - 113350305 113350345 41 GCAGCGGACAGCAAATGGTGGTCAAACTCCTTCAGCAGGCT GCAGCGGACAGCAAATGGTGTTCAAACTCCTTCAGCAGGCT Direct Gain 0 0.964302106845383 0 0.99964427947998 prediction 0.928604213690766 Functional Gain - ALPK1 ENSG00000073331 CDS Human protein_coding chr4:113350325 chr4:113350325 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_103440 0 0 0 0 0 chromatin 0 0.438718592765143 0.99928855895996 0 hPsi_site_2400 iPseU_CNN:0.99928855895996;iRNA_PseU:0 2401 chr1 55130851 55130851 1 + G A LUSC 55130851 - 55130831 55130871 41 CACCAGGCATGAGGTCACTTCATCAAAGGCTCCTGCAGGGC CACCAGGCATGAGGTCACTTTATCAAAGGCTCCTGCAGGGC Direct Gain 0 0.964298807748952 0 0.999083280563354 prediction 0.928597615497904 Functional Gain - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55130851 chr1:55130851 nonsynonymous SNV 0.220 1 21 hPsi_associated_SNPs_103441 0 0 0 0 0 exosome 0 0.438717810264187 0.998166561126708 0 hPsi_site_2401 iPseU_CNN:0.998166561126708;iRNA_PseU:0 2402 chr4 8288453 8288453 1 + C T SKCM 8288453 + 8288433 8288473 41 AATGGGGACTCCTATGAGGCCACCATCAAAGACATCGACAA AATGGGGACTCCTATGAGGCTACCATCAAAGACATCGACAA Direct Gain 0 0.964298580609562 0 0.999743759632111 prediction 0.928597161219124 Functional Gain - HTRA3 ENSG00000170801 CDS Human protein_coding chr4:8288453 chr4:8288453 synonymous SNV . 0 21 hPsi_associated_SNPs_103442 0 0 0 0 1 exosome 0 0.438714840336267 0.999487519264222 0 hPsi_site_2402 iPseU_CNN:0.999487519264222;iRNA_PseU:0 2403 chr4 62845470 62845470 1 + A T BLCA 62845470 + 62845450 62845490 41 AGCTGCTCTTCCTGATTGGGATCAACCGAACTGACCAACCA AGCTGCTCTTCCTGATTGGGTTCAACCGAACTGACCAACCA Direct Gain 0 0.964297755495812 0 0.999996662139893 prediction 0.928595510991625 Functional Gain - ADGRL3 ENSG00000150471 CDS Human protein_coding chr4:62845470 chr4:62845470 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103443 0 0 0 0 1 exosome 0 0.438695621518052 0.999993324279786 0 hPsi_site_2403 iPseU_CNN:0.999993324279786;iRNA_PseU:0 2404 chr15 34395002 34395002 1 + C T STAD 34395002 + 34394982 34395022 41 CAAAGGTATGACTTTACCGGCACACCTGGCAGAAAAGTCGA CAAAGGTATGACTTTACCGGTACACCTGGCAGAAAAGTCGA Direct Gain 0 0.964293973694359 0 0.999999165534973 prediction 0.928587947388718 Functional Gain - PGBD4 ENSG00000182405 CDS Human protein_coding chr15:34395002 chr15:34395002 synonymous SNV . 0 21 hPsi_associated_SNPs_103444 0 0 0 0 0 exosome 0 0.438766683466515 0.999998331069946 0 hPsi_site_2404 iPseU_CNN:0.999998331069946;iRNA_PseU:0 2405 chr17 19232061 19232061 1 + G A STAD 19232061 - 19232041 19232081 41 TGTACGGTGGCTCCAGTGGGCACCCCCCATGGGTCAATGGA TGTACGGTGGCTCCAGTGGGTACCCCCCATGGGTCAATGGA Direct Gain 0 0.964288306518657 0 0.13542902469635 prediction 0.928576613037314 Functional Gain - EPN2 ENSG00000072134 CDS Human protein_coding chr17:19232061 chr17:19232061 synonymous SNV . 0 21 hPsi_associated_SNPs_103445 0 0 0 0 0 Nucleus 0 0.437812033699865 0 0 hPsi_site_2405 iPseU_CNN:0;iRNA_PseU:0 2406 chr20 61684268 61684268 1 + T A rs564130057 61684268 - 61684248 61684288 41 TCAAGAGGCTGAGCCTAATTAATTAGCCGTTTCTGAAAAAA TCAAGAGGCTGAGCCTAATTTATTAGCCGTTTCTGAAAAAA Direct Gain 0 0.964283402356019 0 0.981237351894379 prediction 0.928566804712037 Functional Gain - LINC01056 ENSG00000237119 ncRNA_exonic Human lincRNA chr20:61684268 chr20:61684268 . . 0 21 hPsi_associated_SNPs_103446 0 0 0 0 0 unknown 0 0.438690896823742 0.962474703788758 0 hPsi_site_2406 iPseU_CNN:0.962474703788758;iRNA_PseU:0 2407 chr2 70132061 70132061 1 + C A rs189430193 70132061 - 70132041 70132081 41 TCTGGGAGTAGATAACAGGTGATTTTCTGCTTTTCTTTTAC TCTGGGAGTAGATAACAGGTTATTTTCTGCTTTTCTTTTAC Direct Gain 0 0.964268572744811 0 0.896690487861633 prediction 0.928537145489622 Functional Gain - SNRNP27 ENSG00000124380 UTR3 Human protein_coding chr2:70132061 chr2:70132061 . . 0 21 hPsi_associated_SNPs_103447 0 0 0 0 0 Ribosome 0 0.438718592921387 0.793380975723266 0 hPsi_site_2407 iPseU_CNN:0.793380975723266;iRNA_PseU:0 2408 chr14 60977881 60977881 1 + G T LUAD 60977881 + 60977861 60977901 41 GCACGCCAGAGGTGCTGGGCGTCGCCACCAGCCCGGCCGCC GCACGCCAGAGGTGCTGGGCTTCGCCACCAGCCCGGCCGCC Direct Gain 0 0.964262831136097 0 0.923076152801514 prediction 0.928525662272194 Functional Gain - SIX6 ENSG00000184302 CDS Human protein_coding chr14:60977881 chr14:60977881 nonsynonymous SNV 0.929 2 21 hPsi_associated_SNPs_103448 0 0 0 0 1 unknown 0 0.438919473682101 0.846152305603028 0 hPsi_site_2408 iPseU_CNN:0.846152305603028;iRNA_PseU:0 2409 chr17 7663154 7663154 1 + G A LGG 7663154 - 7663134 7663174 41 AAAGAGGTGGTTGCCAATGTCATTGACCACACCTGCCAAAG AAAGAGGTGGTTGCCAATGTTATTGACCACACCTGCCAAAG Direct Gain 0 0.964262548293988 0 0.999507069587708 prediction 0.928525096587975 Functional Gain - DNAH2 ENSG00000183914 CDS Human protein_coding chr17:7663154 chr17:7663154 nonsynonymous SNV 0.740 0 21 hPsi_associated_SNPs_103449 0 0 0 0 0 nucleus 0 0.438720167536694 0.999014139175416 0 hPsi_site_2409 iPseU_CNN:0.999014139175416;iRNA_PseU:0 2410 chr11 120322337 120322337 1 + G A LUSC 120322337 - 120322317 120322357 41 GTATCCAGCGTCTGTTCCTTCATTTGCTAACCCACTCTGGC GTATCCAGCGTCTGTTCCTTTATTTGCTAACCCACTCTGGC Direct Gain 0 0.964254839523815 0 0.00581786036491394 prediction 0.928509679047629 Functional Gain - ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120322337 chr11:120322337 nonsynonymous SNV 0.287 1 21 hPsi_associated_SNPs_103450 0 0 0 0 0 Cytosol 0 0.438737379277401 0 0 hPsi_site_2410 iPseU_CNN:0;iRNA_PseU:0 2411 chr5 140482208 140482208 1 + C T COAD 140482208 + 140482188 140482228 41 GCTCGGCCACCGCCACGCTGCATGTGCTCCTGGTGGACGGC GCTCGGCCACCGCCACGCTGTATGTGCTCCTGGTGGACGGC Direct Gain 0 0.964253815672901 0 0.910530209541321 prediction 0.928507631345801 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140482208 chr5:140482208 nonsynonymous SNV 0.236 3 21 hPsi_associated_SNPs_103451 0 0 0 0 0 exosome 0 0.437909469793635 0.821060419082642 0 hPsi_site_2411 iPseU_CNN:0.821060419082642;iRNA_PseU:0 2412 chr5 140167399 140167399 1 + G T LUSC 140167399 + 140167379 140167419 41 CGCGCGCTGTCGAACTACGTGTCAGTGCACGCGGAGAGCGG CGCGCGCTGTCGAACTACGTTTCAGTGCACGCGGAGAGCGG Direct Gain 0 0.964252268689734 0 0.999659597873688 prediction 0.928504537379469 Functional Gain - PCDHA1 ENSG00000204970 CDS Human protein_coding chr5:140167399 chr5:140167399 synonymous SNV . 0 21 hPsi_associated_SNPs_103452 0 0 0 0 1 insoluble cytoplasm 0 0.416296320890186 0.999319195747376 0 hPsi_site_2412 iPseU_CNN:0.999319195747376;iRNA_PseU:0 2413 chr19 53995275 53995275 1 + C T SKCM 53995275 + 53995255 53995295 41 AAAAAGCAAACCTTGCACGTCATCATAGACTTCATACTGGA AAAAAGCAAACCTTGCACGTTATCATAGACTTCATACTGGA Direct Gain 0 0.964250735410304 0 0.870925664901733 prediction 0.928501470820609 Functional Gain - ZNF813 ENSG00000198346 CDS Human protein_coding chr19:53995275 chr19:53995275 nonsynonymous SNV 0.003 2 21 hPsi_associated_SNPs_103453 0 0 0 0 0 nucleolus 0 0.437589523081187 0.741851329803466 0 hPsi_site_2413 iPseU_CNN:0.741851329803466;iRNA_PseU:0 2414 chr5 180377415 180377415 1 + C T SKCM 180377415 + 180377395 180377435 41 CAAAATGGAACTCCCATAGTCATCTGCCCAGTCACCCAGGA CAAAATGGAACTCCCATAGTTATCTGCCCAGTCACCCAGGA Direct Gain 0 0.964249909403243 0 0.997593224048615 prediction 0.928499818806485 Functional Gain - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180377415 chr5:180377415 synonymous SNV . 0 21 hPsi_associated_SNPs_103454 0 0 0 1 0 chromatin 0 0.438718650087026 0.99518644809723 0 hPsi_site_2414 iPseU_CNN:0.99518644809723;iRNA_PseU:0 2415 chr20 49492591 49492591 1 + G T rs533380214 49492591 + 49492571 49492611 41 TCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCCGCCTCC TCCGCCTCCCGGGTTCAAGTTATTCTCCTGCCTCCGCCTCC Direct Gain 0 0.964241696809777 0 0.999987065792084 prediction 0.928483393619554 Functional Gain - BCAS4 ENSG00000124243 CDS Human protein_coding chr20:49492591 chr20:49492591 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103455 0 0 0 0 2 exosome 0 0.43885670382857 0.999974131584168 0 hPsi_site_2415 iPseU_CNN:0.999974131584168;iRNA_PseU:0 2416 chr6 31918104 31918104 1 + G A DLBC 31918104 - 31918084 31918124 41 GTCAGCACAAAGTACTCAGACACCACAGCCCCCATACAGCT GTCAGCACAAAGTACTCAGATACCACAGCCCCCATACAGCT Direct Gain 0 0.964235825723193 0 0.942165851593018 prediction 0.928471651446387 Functional Gain - CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31918104 chr6:31918104 synonymous SNV . 0 21 hPsi_associated_SNPs_103456 0 0 0 0 0 chromatin 0 0.439320110611726 0.884331703186036 0 hPsi_site_2416 iPseU_CNN:0.884331703186036;iRNA_PseU:0 2417 chr20 57415441 57415441 1 + G A SKCM 57415441 - 57415421 57415461 41 GCACTCGGGGAGGGACAGCTCAAGGTCTGCCTCCTCGTGCT GCACTCGGGGAGGGACAGCTTAAGGTCTGCCTCCTCGTGCT Direct Gain 0 0.964229891199717 0 0.999968647956848 prediction 0.928459782399433 Functional Gain - GNAS ENSG00000087460 CDS Human protein_coding chr20:57415441 chr20:57415441 nonsynonymous SNV 0.871 1 21 hPsi_associated_SNPs_103457 0 0 0 0 0 Cytosol 0 0.438718593291741 0.999937295913696 0 hPsi_site_2417 iPseU_CNN:0.999937295913696;iRNA_PseU:0 2418 chr15 66586034 66586034 1 + C T rs551433057 66586034 + 66586014 66586054 41 TGCGGCCCTGCGTGCCCTGCCACAGCCCGCTCTGCCCGCAG TGCGGCCCTGCGTGCCCTGCTACAGCCCGCTCTGCCCGCAG Direct Gain 0 0.964227989378517 0 0.999788165092468 prediction 0.928455978757033 Functional Gain - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66586034 chr15:66586034 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_103458 0 0 1 0 1 chromatin 0 0.438718550856855 0.999576330184936 0 hPsi_site_2418 iPseU_CNN:0.999576330184936;iRNA_PseU:0 2419 chr21 39671204 39671204 1 + C T SKCM 39671204 + 39671184 39671224 41 ATGGATGCCATTCACATCGGCATGTCCAGCACCCCCCTGGT ATGGATGCCATTCACATCGGTATGTCCAGCACCCCCCTGGT Direct Gain 0 0.964213324195518 0 0.999306559562683 prediction 0.928426648391036 Functional Gain - KCNJ15 ENSG00000157551 CDS Human protein_coding chr21:39671204 chr21:39671204 synonymous SNV . 0 21 hPsi_associated_SNPs_103459 0 0 0 0 0 exosome 0 0.438718484059729 0.998613119125366 0 hPsi_site_2419 iPseU_CNN:0.998613119125366;iRNA_PseU:0 2420 chr14 96731022 96731022 1 + C T UCEC 96731022 + 96731002 96731042 41 AACAATGCACCCCTAAAAGTCTTGCTCCAATATCTTCATCC AACAATGCACCCCTAAAAGTTTTGCTCCAATATCTTCATCC Direct Gain 0 0.964192152095653 0 0.990632653236389 prediction 0.928384304191306 Functional Gain - BDKRB1 ENSG00000100739 CDS Human protein_coding chr14:96731022 chr14:96731022 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_103460 0 0 0 0 0 nucleus 0 0.438266872701427 0.981265306472778 0 hPsi_site_2420 iPseU_CNN:0.981265306472778;iRNA_PseU:0 2421 chr16 29821605 29821605 1 + C T SARC 29821605 + 29821585 29821625 41 TGGAGTAGAGTCCCTTGGTACAAGCTCCTCTCCCCCCTCTT TGGAGTAGAGTCCCTTGGTATAAGCTCCTCTCCCCCCTCTT Direct Gain 0 0.964185336639924 0 0.999969661235809 prediction 0.928370673279848 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29821605 chr16:29821605 synonymous SNV . 0 21 hPsi_associated_SNPs_103461 0 0 1 2 0 Cytosol 0 0.438718559788183 0.999939322471618 0 hPsi_site_2421 iPseU_CNN:0.999939322471618;iRNA_PseU:0 2422 chr8 146032884 146032884 1 + C T COAD 146032884 + 146032864 146032904 41 ACAACTCGCTGCTTCTCAGGCACCAGATCATCCACACCGGC ACAACTCGCTGCTTCTCAGGTACCAGATCATCCACACCGGC Direct Gain 0 0.964181613431215 0 0.998393416404724 prediction 0.92836322686243 Functional Gain - ZNF517 ENSG00000197363 CDS Human protein_coding chr8:146032884 chr8:146032884 nonsynonymous SNV 0.080 2 21 hPsi_associated_SNPs_103462 0 0 0 0 0 chromatin 0 0.438718834692252 0.996786832809448 0 hPsi_site_2422 iPseU_CNN:0.996786832809448;iRNA_PseU:0 2423 chr19 52272664 52272664 1 + C T OV 52272664 + 52272644 52272684 41 GCTGTGGTGGCTTCTTTCTTCATCTGTTGGTTTCCCTTTCA GCTGTGGTGGCTTCTTTCTTTATCTGTTGGTTTCCCTTTCA Direct Gain 0 0.964175828043732 0 0.944830298423767 prediction 0.928351656087465 Functional Gain - FPR2 ENSG00000171049 CDS Human protein_coding chr19:52272664 chr19:52272664 synonymous SNV . 0 21 hPsi_associated_SNPs_103463 0 0 0 0 0 exosome 0 0.438724607100704 0.889660596847534 0 hPsi_site_2423 iPseU_CNN:0.889660596847534;iRNA_PseU:0 2424 chr18 77170431 77170431 1 + C T LUAD 77170431 + 77170411 77170451 41 GGCTATGCATCCTCCAACGTCAGCCCCGCCCTGCCGCTCCC GGCTATGCATCCTCCAACGTTAGCCCCGCCCTGCCGCTCCC Direct Gain 0 0.964169585488645 0 0.998083114624023 prediction 0.92833917097729 Functional Gain - NFATC1 ENSG00000131196 CDS Human protein_coding chr18:77170431 chr18:77170431 synonymous SNV . 0 21 hPsi_associated_SNPs_103464 0 0 1 0 1 Cytosol 0 0.438722596778586 0.996166229248046 0 hPsi_site_2424 iPseU_CNN:0.996166229248046;iRNA_PseU:0 2425 chr22 23101658 23101658 1 + G A DLBC 23101658 - 23101638 23101678 41 GAGCTGCAGTAATAATCAGCCTCGTCCTCAGCCTGGAGCCC GAGCTGCAGTAATAATCAGCTTCGTCCTCAGCCTGGAGCCC Direct Gain 0 0.964169139712851 0 0.998305022716522 prediction 0.928338279425702 Functional Gain - GGTLC2;MIR650 ENSG00000211666 CDS Human IG_V_gene chr22:23101658 chr22:23101658 synonymous SNV . 0 21 hPsi_associated_SNPs_103465 0 0 0 0 0 unknown 0 0.43874801382804 0.996610045433044 0 hPsi_site_2425 iPseU_CNN:0.996610045433044;iRNA_PseU:0 2426 chr13 109562393 109562393 1 + C T SKCM 109562393 + 109562373 109562413 41 AGAGAAATCCAGACTTGTTTCACAACCTCTTGGCCAGAGCA AGAGAAATCCAGACTTGTTTTACAACCTCTTGGCCAGAGCA Direct Gain 0 0.964168720196053 0 0.778260111808777 prediction 0.928337440392107 Functional Gain - MYO16 ENSG00000041515 CDS Human protein_coding chr13:109562393 chr13:109562393 nonsynonymous SNV 0.888 1 21 hPsi_associated_SNPs_103466 0 0 0 0 1 chromatin 0 0.438720482248873 0.556520223617554 0 hPsi_site_2426 iPseU_CNN:0.556520223617554;iRNA_PseU:0 2427 chr4 110402928 110402928 1 + G A LIHC 110402928 - 110402908 110402948 41 CTAAAGCAGACCTGCTTCCTCATCCTCCTCCTCCTCTTCCT CTAAAGCAGACCTGCTTCCTTATCCTCCTCCTCCTCTTCCT Direct Gain 0 0.964158538005273 0 0.932461857795715 prediction 0.928317076010545 Functional Gain - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110402928 chr4:110402928 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103467 0 0 0 0 0 Cytosol 0 0.438720827934877 0.86492371559143 0 hPsi_site_2427 iPseU_CNN:0.86492371559143;iRNA_PseU:0 2428 chr19 20308324 20308324 1 + G A BLCA 20308324 - 20308304 20308344 41 AAAGGCTTTGCCACATTCTTCACAAATGTAGGGTTTCTCTC AAAGGCTTTGCCACATTCTTTACAAATGTAGGGTTTCTCTC Direct Gain 0 0.964153434134886 0 0.975274205207825 prediction 0.928306868269771 Functional Gain - ZNF486 ENSG00000256229 CDS Human protein_coding chr19:20308324 chr19:20308324 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_103468 0 0 0 0 0 exosome 0 0.438689524305962 0.95054841041565 0 hPsi_site_2428 iPseU_CNN:0.95054841041565;iRNA_PseU:0 2429 chr8 101237454 101237454 1 + C A OV 101237454 - 101237434 101237474 41 CAGGCACAGCAGGAATAGGTGACAGCTTCTCCCGCCAATTT CAGGCACAGCAGGAATAGGTTACAGCTTCTCCCGCCAATTT Direct Gain 0 0.964152671303637 0 0.999996662139893 prediction 0.928305342607274 Functional Gain - SPAG1 ENSG00000104450 CDS Human protein_coding chr8:101237454 chr8:101237454 stopgain 0.997 0 21 hPsi_associated_SNPs_103469 0 0 0 0 0 chromatin 0 0.438720931399334 0.999993324279786 0 hPsi_site_2429 iPseU_CNN:0.999993324279786;iRNA_PseU:0 2430 chr1 248570155 248570155 1 + C T UCEC 248570155 + 248570135 248570175 41 AGTGGAGGGCAGGAAGAAGGCATTTGCCACTTGCTCATCCC AGTGGAGGGCAGGAAGAAGGTATTTGCCACTTGCTCATCCC Direct Gain 0 0.964151096006943 0 0.999984204769135 prediction 0.928302192013886 Functional Gain - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248570155 chr1:248570155 nonsynonymous SNV 0.045 3 21 hPsi_associated_SNPs_103470 0 0 0 0 0 unknown 0 0.438629759753263 0.99996840953827 0 hPsi_site_2430 iPseU_CNN:0.99996840953827;iRNA_PseU:0 2431 chr1 146649920 146649920 1 + A T LUSC 146649920 + 146649900 146649940 41 GCAGCTACCAGATTAAAAGGAATAGTCCCATTAGCAAAGGC GCAGCTACCAGATTAAAAGGTATAGTCCCATTAGCAAAGGC Direct Gain 0 0.964133762113048 0 0.99999874830246 prediction 0.928267524226095 Functional Gain - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146649920 chr1:146649920 . . 0 21 hPsi_associated_SNPs_103471 0 0 1 0 0 unknown 0 0.438718580523868 0.99999749660492 0 hPsi_site_2431 iPseU_CNN:0.99999749660492;iRNA_PseU:0 2432 chr10 5567351 5567351 1 + C T SKCM 5567351 + 5567331 5567371 41 AAGGACGGCAACGGCTTCGTCAGCGCCGCCGAGCTGCGACA AAGGACGGCAACGGCTTCGTTAGCGCCGCCGAGCTGCGACA Direct Gain 0 0.964121494794263 0 0.99999988079071 prediction 0.928242989588526 Functional Gain - CALML3 ENSG00000178363 CDS Human protein_coding chr10:5567351 chr10:5567351 synonymous SNV . 0 21 hPsi_associated_SNPs_103472 0 0 0 0 0 unknown 0 0.43873758219069 0.99999976158142 0 hPsi_site_2432 iPseU_CNN:0.99999976158142;iRNA_PseU:0 2433 chr22 40055757 40055757 1 + C T SKCM 40055757 + 40055737 40055777 41 CAATGGCATGGCCTCCACTTCTCCCTGGGCCTCCCTCTACT CAATGGCATGGCCTCCACTTTTCCCTGGGCCTCCCTCTACT Direct Gain 0 0.964106467057213 0 0.946640491485596 prediction 0.928212934114426 Functional Gain - CACNA1I ENSG00000100346 CDS Human protein_coding chr22:40055757 chr22:40055757 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_103473 0 0 0 0 1 Endoplasmic reticulum 0 0.438718592995107 0.893280982971192 0 hPsi_site_2433 iPseU_CNN:0.893280982971192;iRNA_PseU:0 2434 chr8 70517113 70517113 1 + C T UCEC 70517113 + 70517093 70517133 41 TTGCCCAAATATGAACGGGTCAAAGAACTATGCCAGCAGGC TTGCCCAAATATGAACGGGTTAAAGAACTATGCCAGCAGGC Direct Gain 0 0.964087262081918 0 0.887939691543579 prediction 0.928174524163836 Functional Gain - SULF1 ENSG00000137573 CDS Human protein_coding chr8:70517113 chr8:70517113 synonymous SNV . 0 21 hPsi_associated_SNPs_103474 0 0 0 0 2 Nucleus 0 0.438570085211743 0.775879383087158 0 hPsi_site_2434 iPseU_CNN:0.775879383087158;iRNA_PseU:0 2435 chr9 125281448 125281448 1 + C T SKCM 125281448 + 125281428 125281468 41 GGAGAATCAGAGCAGTGTGTCTGAGTTCCTCCTCCTGGACC GGAGAATCAGAGCAGTGTGTTTGAGTTCCTCCTCCTGGACC Direct Gain 0 0.964084870162364 0 0.357057869434357 prediction 0.928169740324729 Functional Gain - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125281448 chr9:125281448 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_103475 0 0 0 0 0 exosome 0 0.438718851632387 0 0 hPsi_site_2435 iPseU_CNN:0;iRNA_PseU:0 2436 chr19 39009873 39009873 1 + G A LUAD 39009873 - 39009853 39009893 41 AGCTCCGGCCGTGCACGGCTCACAATGGGCTGTGCGAACAC AGCTCCGGCCGTGCACGGCTTACAATGGGCTGTGCGAACAC Direct Gain 0 0.964076363707969 0 0.993056178092957 prediction 0.928152727415937 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:39009873 chr19:39009873 synonymous SNV . 0 21 hPsi_associated_SNPs_103476 0 0 0 0 0 chromatin 0 0.43872914071084 0.986112356185914 0 hPsi_site_2436 iPseU_CNN:0.986112356185914;iRNA_PseU:0 2437 chr11 44098924 44098924 1 + G A rs147531492 44098924 - 44098904 44098944 41 GGAAGTCAAGACTCTTACCTCACTGTCCAGGTAGACATAGG GGAAGTCAAGACTCTTACCTTACTGTCCAGGTAGACATAGG Direct Gain 0 0.964055751986929 0 0.999951124191284 prediction 0.928111503973858 Functional Gain - ACCS ENSG00000110455 CDS Human protein_coding chr11:44098924 chr11:44098924 nonsynonymous SNV 0.811 0 21 hPsi_associated_SNPs_103477 0 0 0 0 0 chromatin 0 0.438718070238354 0.999902248382568 0 hPsi_site_2437 iPseU_CNN:0.999902248382568;iRNA_PseU:0 2438 chr10 82116172 82116172 1 + G A rs41296131 82116172 - 82116152 82116192 41 AGATACAATACTGTATCTGGCACCCCTGCCCGGGTGCCCCC AGATACAATACTGTATCTGGTACCCCTGCCCGGGTGCCCCC Direct Gain 0 0.964052688845541 0 0.361933618783951 prediction 0.928105377691082 Functional Gain - DYDC1;DYDC2 ENSG00000133665;ENSG00000170788 UTR5 Human other chr10:82116172 chr10:82116172 . . 0 21 hPsi_associated_SNPs_103478 0 0 0 0 1 unknown 0 0.438718593012962 0 0 hPsi_site_2438 iPseU_CNN:0;iRNA_PseU:0 2439 chr22 26164390 26164390 1 + G A rs56195244 26164390 - 26164370 26164410 41 GGGGCGTCATGGGGATGAGTCTTCTCTGGCTTGGCTGAGTC GGGGCGTCATGGGGATGAGTTTTCTCTGGCTTGGCTGAGTC Direct Gain 0 0.964048085033274 0 0.997567534446716 prediction 0.928096170066547 Functional Gain - MYO18B ENSG00000133454 CDS Human protein_coding chr22:26164390 chr22:26164390 synonymous SNV . 0 21 hPsi_associated_SNPs_103479 0 0 0 0 0 chromatin 0 0.438718592995109 0.995135068893432 0 hPsi_site_2439 iPseU_CNN:0.995135068893432;iRNA_PseU:0 2440 chr10 104117876 104117876 1 + G A CHOL 104117876 - 104117856 104117896 41 GAACCTGGTGTGACTTTGGTCATATGGCGTGGGGGCCGAGG GAACCTGGTGTGACTTTGGTTATATGGCGTGGGGGCCGAGG Direct Gain 0 0.964045807921185 0 0.796375274658203 prediction 0.92809161584237 Functional Gain - GBF1 ENSG00000107862 CDS Human protein_coding chr10:104117876 chr10:104117876 nonsynonymous SNV 0.974 0 21 hPsi_associated_SNPs_103480 0 0 0 0 0 Nucleus 0 0.438660074285693 0.592750549316406 0 hPsi_site_2440 iPseU_CNN:0.592750549316406;iRNA_PseU:0 2441 chr14 64686074 64686074 1 + G A GBM 64686074 - 64686054 64686094 41 ATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCAGCTC ATATCAGAGGGAGGCTTTGCTATCTTTAACATTTCCAGCTC Direct Gain 0 0.964043673244346 0 0.991384267807007 prediction 0.928087346488693 Functional Gain - SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64686074 chr14:64686074 nonsynonymous SNV 0.119 0 21 hPsi_associated_SNPs_103481 0 0 0 0 0 Nucleus 0 0.438718588706794 0.982768535614014 0 hPsi_site_2441 iPseU_CNN:0.982768535614014;iRNA_PseU:0 2442 chr10 60549688 60549688 1 + C A UCEC 60549688 - 60549668 60549708 41 TTTCAGTAACCTTACCATGAGATATTGCCTTGCAAGACAGA TTTCAGTAACCTTACCATGATATATTGCCTTGCAAGACAGA Direct Gain 0 0.964036051952075 0 0.942268848419189 prediction 0.92807210390415 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60549688 chr10:60549688 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103482 0 0 0 0 0 nucleus 0 0.438718592991938 0.884537696838378 0 hPsi_site_2442 iPseU_CNN:0.884537696838378;iRNA_PseU:0 2443 chr19 58904809 58904809 1 + G A LUAD 58904809 - 58904789 58904829 41 ACATCCACAGCCTGTCGTCTCACAGTCCCGGCGCGCCCAAT ACATCCACAGCCTGTCGTCTTACAGTCCCGGCGCGCCCAAT Direct Gain 0 0.964030904978055 0 0.999936461448669 prediction 0.92806180995611 Functional Gain - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904809 chr19:58904809 synonymous SNV . 0 21 hPsi_associated_SNPs_103483 0 0 0 0 0 Ribosome 0 0.437758785502423 0.999872922897338 0 hPsi_site_2443 iPseU_CNN:0.999872922897338;iRNA_PseU:0 2444 chr17 26725943 26725943 1 + C T rs41297903 26725943 + 26725923 26725963 41 GGTACCAATCCACCAGGCAGCTCAGGGCTCCTGCCCAGCCC GGTACCAATCCACCAGGCAGTTCAGGGCTCCTGCCCAGCCC Direct Gain 0 0.964023054781374 0 0.857319831848145 prediction 0.928046109562748 Functional Gain - SARM1;SLC46A1 ENSG00000004139;ENSG00000076351 UTR3 Human other chr17:26725943 chr17:26725943 . . 0 21 hPsi_associated_SNPs_103484 1 0 0 0 0 unknown 0 0.438718592995102 0.71463966369629 0 hPsi_site_2444 iPseU_CNN:0.71463966369629;iRNA_PseU:0 2445 chr19 54178966 54178966 1 + C A UCEC 54178966 - 54178946 54178986 41 TCTTGAGGGTCACAGCAGGAGACAGTCTTGCTCCAGCACTC TCTTGAGGGTCACAGCAGGATACAGTCTTGCTCCAGCACTC Direct Gain 0 0.964019436730658 0 0.990765333175659 prediction 0.928038873461316 Functional Gain - MIR520E ENSG00000207599 ncRNA_exonic Human miRNA chr19:54178966 chr19:54178966 . . 0 21 hPsi_associated_SNPs_103485 0 0 0 0 0 unknown 0 0.438022921258969 0.981530666351318 0 hPsi_site_2445 iPseU_CNN:0.981530666351318;iRNA_PseU:0 2446 chr8 55540178 55540178 1 + G A STAD 55540178 - 55540158 55540198 41 CAAAACACAGACTTCAGGGGCACATGCCTCACTGGCAGAGC CAAAACACAGACTTCAGGGGTACATGCCTCACTGGCAGAGC Direct Gain 0 0.964014888816094 0 0.971017837524414 prediction 0.928029777632189 Functional Gain - RP1 ENSG00000104237 CDS Human protein_coding chr8:55540178 chr8:55540178 nonsynonymous SNV 0.214 0 21 hPsi_associated_SNPs_103486 0 0 0 0 0 exosome 0 0.438678727564832 0.942035675048828 0 hPsi_site_2446 iPseU_CNN:0.942035675048828;iRNA_PseU:0 2447 chr19 1388922 1388922 1 + C T LUSC 1388922 + 1388902 1388942 41 GCCAAGCTGGATGACCTCGTCAACTGGGCCCGCCGGGTGAG GCCAAGCTGGATGACCTCGTTAACTGGGCCCGCCGGGTGAG Direct Gain 0 0.964003247115161 0 0.985795080661774 prediction 0.928006494230322 Functional Gain - NDUFS7 ENSG00000115286 CDS Human protein_coding chr19:1388922 chr19:1388922 synonymous SNV . 0 21 hPsi_associated_SNPs_103487 0 0 1 0 2 chromatin 0 0.438718592997124 0.971590161323548 0 hPsi_site_2447 iPseU_CNN:0.971590161323548;iRNA_PseU:0 2448 chr14 90446926 90446926 1 + C T ESCA 90446926 + 90446906 90446946 41 GAAGAAGGCCTCCGGGTTGTCATACACACCTCCAACCTCAT GAAGAAGGCCTCCGGGTTGTTATACACACCTCCAACCTCAT Direct Gain 0 0.964002834388029 0 0.990366637706757 prediction 0.928005668776058 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90446926 chr14:90446926 synonymous SNV . 0 21 hPsi_associated_SNPs_103488 0 0 1 0 2 chromatin 0 0.438718577082478 0.980733275413514 0 hPsi_site_2448 iPseU_CNN:0.980733275413514;iRNA_PseU:0 2449 chr5 82833328 82833328 1 + C T SKCM 82833328 + 82833308 82833348 41 GGTGAGCCTGATGTTTTCCCCACAGTCCCATTCCATGAGGA GGTGAGCCTGATGTTTTCCCTACAGTCCCATTCCATGAGGA Direct Gain 0 0.963997731297953 0 0.640005171298981 prediction 0.927995462595905 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82833328 chr5:82833328 synonymous SNV . 0 21 hPsi_associated_SNPs_103489 0 0 1 0 0 Ribosome 0 0.438729493073634 0.280010342597962 0 hPsi_site_2449 iPseU_CNN:0.280010342597962;iRNA_PseU:0 2450 chrX 51638656 51638656 1 + A T UCEC 51638656 + 51638636 51638676 41 AGACCCCTTTCAAGGCTTGGAATGATACCACTAAGGCCCCA AGACCCCTTTCAAGGCTTGGTATGATACCACTAAGGCCCCA Direct Gain 0 0.963994517391339 0 0.999861419200897 prediction 0.927989034782678 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638656 chrX:51638656 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103490 0 0 1 0 1 chromatin 0 0.438718592995102 0.999722838401794 0 hPsi_site_2450 iPseU_CNN:0.999722838401794;iRNA_PseU:0 2451 chr11 57427329 57427329 1 + G A GBM 57427329 - 57427309 57427349 41 AGAAGGCGACACACTGTAGACTTGCCCACATCAGTGGGGCC AGAAGGCGACACACTGTAGATTTGCCCACATCAGTGGGGCC Direct Gain 0 0.963993321096529 0 0.718601942062378 prediction 0.927986642193058 Functional Gain - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427329 chr11:57427329 synonymous SNV . 0 21 hPsi_associated_SNPs_103491 0 0 0 0 0 Cytosol 0 0.438720780922679 0.437203884124756 0 hPsi_site_2451 iPseU_CNN:0.437203884124756;iRNA_PseU:0 2452 chr17 1801137 1801137 1 + G T rs1051315 1801137 + 1801117 1801157 41 GAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAA GAGGACCGCTGATAAGCATTTACTTGCCGTCCCCTAAGGAA Direct Gain 0 0.96398710418882 0 0.990746378898621 prediction 0.927974208377641 Functional Gain - RPA1 ENSG00000132383 UTR3 Human protein_coding chr17:1801137 chr17:1801137 . . 0 21 hPsi_associated_SNPs_103492 0 0 1 0 0 chromatin 0 0.438718549845524 0.981492757797242 0 hPsi_site_2452 iPseU_CNN:0.981492757797242;iRNA_PseU:0 2453 chr2 234527178 234527178 1 + C A LIHC 234527178 - 234527158 234527198 41 GGCTTTCCCTGATGGCAGTTGATACCACCAATGAAGATCAT GGCTTTCCCTGATGGCAGTTTATACCACCAATGAAGATCAT Direct Gain 0 0.963985643807358 0 0.894231557846069 prediction 0.927971287614716 Functional Gain - UGT1A8 ENSG00000241635 CDS Human protein_coding chr2:234527178 chr2:234527178 synonymous SNV . 0 21 hPsi_associated_SNPs_103493 0 0 0 0 0 exosome 0 0.43871860666806 0.788463115692138 0 hPsi_site_2453 iPseU_CNN:0.788463115692138;iRNA_PseU:0 2454 chr9 104171829 104171829 1 + G A BLCA 104171829 - 104171809 104171849 41 TCATGGGTTTCTTGGGTTTTCACCTCTGCATGGATCTTCTG TCATGGGTTTCTTGGGTTTTTACCTCTGCATGGATCTTCTG Direct Gain 0 0.963983650882705 0 0.997777342796326 prediction 0.92796730176541 Functional Gain - ZNF189 ENSG00000136870 CDS Human protein_coding chr9:104171829 chr9:104171829 synonymous SNV . 0 21 hPsi_associated_SNPs_103494 0 0 0 0 0 chromatin 0 0.438720464149436 0.995554685592652 0 hPsi_site_2454 iPseU_CNN:0.995554685592652;iRNA_PseU:0 2455 chr16 8943059 8943059 1 + G T rs192550528 8943059 + 8943039 8943079 41 AGCCCCGGATCCGGTGGGGTGAAAGCAGCCAGCTCATCCCA AGCCCCGGATCCGGTGGGGTTAAAGCAGCCAGCTCATCCCA Direct Gain 0 0.963949082505515 0 0.999058961868286 prediction 0.927898165011029 Functional Gain - PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8943059 chr16:8943059 . . 0 21 hPsi_associated_SNPs_103495 0 0 1 0 0 Ribosome 0 0.438717616582046 0.998117923736572 0 hPsi_site_2455 iPseU_CNN:0.998117923736572;iRNA_PseU:0 2456 chr17 42268154 42268154 1 + C T KICH 42268154 + 42268134 42268174 41 ATCAATTACCGCCAATTCTTCACAGCACCTGCCACTGTCTC ATCAATTACCGCCAATTCTTTACAGCACCTGCCACTGTCTC Direct Gain 0 0.963948823630662 0 0.952429413795471 prediction 0.927897647261324 Functional Gain - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42268154 chr17:42268154 synonymous SNV . 0 21 hPsi_associated_SNPs_103496 0 0 1 0 0 Endoplasmic reticulum 0 0.448519447489773 0.904858827590942 0 hPsi_site_2456 iPseU_CNN:0.904858827590942;iRNA_PseU:0 2457 chr7 91936884 91936884 1 + G A LUSC 91936884 - 91936864 91936904 41 AGCATCAATAGCTGCTCTCTCATATTCACCCTGGTCAAGTT AGCATCAATAGCTGCTCTCTTATATTCACCCTGGTCAAGTT Direct Gain 0 0.963934811896917 0 0.971641063690186 prediction 0.927869623793833 Functional Gain - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:91936884 chr7:91936884 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103497 0 0 0 0 0 Cytosol 0 0.438718607422179 0.943282127380372 0 hPsi_site_2457 iPseU_CNN:0.943282127380372;iRNA_PseU:0 2458 chr4 9784305 9784305 1 + G A BRCA 9784305 - 9784285 9784325 41 GGTTCGATTCAGGCTGGAGTCACAGTTCTCTGCATTCACGT GGTTCGATTCAGGCTGGAGTTACAGTTCTCTGCATTCACGT Direct Gain 0 0.963932039072128 0 0.99991637468338 prediction 0.927864078144255 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784305 chr4:9784305 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_103498 0 0 0 0 0 unknown 0 0.438087896468023 0.99983274936676 0 hPsi_site_2458 iPseU_CNN:0.99983274936676;iRNA_PseU:0 2459 chr7 99621247 99621247 1 + C T UCEC 99621247 + 99621227 99621267 41 AGGAAGACCACATGTGGGGGCAGGATTCCACCCTACAGGAC AGGAAGACCACATGTGGGGGTAGGATTCCACCCTACAGGAC Direct Gain 0 0.963929874891301 0 0.849725246429443 prediction 0.927859749782603 Functional Gain - ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99621247 chr7:99621247 stopgain 0.984 0 21 hPsi_associated_SNPs_103499 0 0 1 0 1 Cytosol 0 0.438718592994995 0.699450492858886 0 hPsi_site_2459 iPseU_CNN:0.699450492858886;iRNA_PseU:0 2460 chr9 127115934 127115934 1 + G T UCEC 127115934 + 127115914 127115954 41 ACCTCAATCTCCAGAGGAGTGATTTTCTCAGTGAGGACTGC ACCTCAATCTCCAGAGGAGTTATTTTCTCAGTGAGGACTGC Direct Gain 0 0.963917739714624 0 0.350379824638367 prediction 0.927835479429248 Functional Gain - PSMB7 ENSG00000136930 CDS Human protein_coding chr9:127115934 chr9:127115934 synonymous SNV . 0 21 hPsi_associated_SNPs_103500 0 0 0 0 0 Ribosome 0 0.438868338116009 0 0 hPsi_site_2460 iPseU_CNN:0;iRNA_PseU:0 2461 chr11 48328224 48328224 1 + C T UCEC 48328224 + 48328204 48328244 41 GGGGCCTCCTGGTTAGCTGGCTTCCTGCATTCCATCCTGCA GGGGCCTCCTGGTTAGCTGGTTTCCTGCATTCCATCCTGCA Direct Gain 0 0.963905569869658 0 0.968510627746582 prediction 0.927811139739316 Functional Gain - OR4S1 ENSG00000176555 CDS Human protein_coding chr11:48328224 chr11:48328224 synonymous SNV . 0 21 hPsi_associated_SNPs_103501 0 0 0 0 0 unknown 0 0.438718593104093 0.937021255493164 0 hPsi_site_2461 iPseU_CNN:0.937021255493164;iRNA_PseU:0 2462 chr7 141464345 141464345 1 + G T LUSC 141464345 + 141464325 141464365 41 AAGTGGAGAGTTTCTAGGGTGATGGTATGGATGCTGTTGGG AAGTGGAGAGTTTCTAGGGTTATGGTATGGATGCTGTTGGG Direct Gain 0 0.963901592738258 0 0.0241340398788452 prediction 0.927803185476517 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464345 chr7:141464345 synonymous SNV . 0 21 hPsi_associated_SNPs_103502 0 0 1 0 0 exosome 0 0.438718590491898 0 0 hPsi_site_2462 iPseU_CNN:0;iRNA_PseU:0 2463 chr12 7069342 7069342 1 + C T rs114388315 7069342 + 7069322 7069362 41 ACGGAGGCGCAGTACAAGTTCATCTACGTGGCCATCGCCCA ACGGAGGCGCAGTACAAGTTTATCTACGTGGCCATCGCCCA Direct Gain 0 0.963901198307719 0 0.999273657798767 prediction 0.927802396615438 Functional Gain - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7069342 chr12:7069342 synonymous SNV . 0 21 hPsi_associated_SNPs_103503 0 0 0 0 2 chromatin 0 0.438718593500538 0.998547315597534 0 hPsi_site_2463 iPseU_CNN:0.998547315597534;iRNA_PseU:0 2464 chr1 186370204 186370204 1 + A T LIHC 186370204 + 186370184 186370224 41 ATGTATCCACCATTATTGTTAAAGATTTACCTTAGCAGACA ATGTATCCACCATTATTGTTTAAGATTTACCTTAGCAGACA Direct Gain 0 0.96389818116256 0 0.948405504226685 prediction 0.92779636232512 Functional Gain - OCLM ENSG00000262180 CDS Human protein_coding chr1:186370204 chr1:186370204 nonsynonymous SNV 0.014 0 21 hPsi_associated_SNPs_103504 0 0 1 0 0 exosome 0 0.438718736030536 0.89681100845337 0 hPsi_site_2464 iPseU_CNN:0.89681100845337;iRNA_PseU:0 2465 chr16 57719771 57719771 1 + G T rs74566764 57719771 + 57719751 57719791 41 CTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACCCCGTT CTGGTGGGTGTGACATGGGGTTTGGCCATCTTCACCCCGTT Direct Gain 0 0.963866152672019 0 0.994052767753601 prediction 0.927732305344039 Functional Gain - ADGRG3 ENSG00000182885 CDS Human protein_coding chr16:57719771 chr16:57719771 synonymous SNV . 0 21 hPsi_associated_SNPs_103505 0 0 0 0 1 Nucleus 0 0.438718804983296 0.988105535507202 0 hPsi_site_2465 iPseU_CNN:0.988105535507202;iRNA_PseU:0 2466 chr15 59752234 59752234 1 + G T SARC 59752234 + 59752214 59752254 41 GACAGGATCCTCTGCCATGAGAAAACCACCGCCGCCCTCGT GACAGGATCCTCTGCCATGATAAAACCACCGCCGCCCTCGT Direct Gain 0 0.963854497818492 0 0.98193359375 prediction 0.927708995636983 Functional Gain - FAM81A ENSG00000157470 CDS Human protein_coding chr15:59752234 chr15:59752234 nonsynonymous SNV 0.979 4 21 hPsi_associated_SNPs_103506 0 0 0 0 0 Cytosol 0 0.438694599964143 0.9638671875 0 hPsi_site_2466 iPseU_CNN:0.9638671875;iRNA_PseU:0 2467 chr19 10395810 10395810 1 + C T THCA 10395810 + 10395790 10395830 41 GCCCCCCGGTATGAGATTGTCATCATCACTGTGGTAGCAGC GCCCCCCGGTATGAGATTGTTATCATCACTGTGGTAGCAGC Direct Gain 0 0.963853226932774 0 0.999997973442078 prediction 0.927706453865548 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395810 chr19:10395810 synonymous SNV . 0 21 hPsi_associated_SNPs_103507 0 0 1 0 1 Nucleus 0 0.44486964614284 0.999995946884156 0 hPsi_site_2467 iPseU_CNN:0.999995946884156;iRNA_PseU:0 2468 chr1 248366947 248366947 1 + C A LUSC 248366947 - 248366927 248366967 41 AAAGAATCTTTTCAAATATTGATGTGTCACTGCATGAGAGG AAAGAATCTTTTCAAATATTTATGTGTCACTGCATGAGAGG Direct Gain 0 0.963853087407018 0 0.981533169746399 prediction 0.927706174814036 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248366947 chr1:248366947 stopgain 0.000 0 21 hPsi_associated_SNPs_103508 0 0 0 0 0 exosome 0 0.438718575283676 0.963066339492798 0 hPsi_site_2468 iPseU_CNN:0.963066339492798;iRNA_PseU:0 2469 chr17 47895226 47895226 1 + G A OV 47895226 - 47895206 47895246 41 CCAAAAGCAATTGTTTTAATCATGTTGCTTCCCTCTGTGAT CCAAAAGCAATTGTTTTAATTATGTTGCTTCCCTCTGTGAT Direct Gain 0 0.963843353292679 0 0.723594427108765 prediction 0.927686706585359 Functional Gain - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47895226 chr17:47895226 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103509 0 0 0 0 0 Cytosol 0 0.438718588338213 0.44718885421753 0 hPsi_site_2469 iPseU_CNN:0.44718885421753;iRNA_PseU:0 2470 chr9 136334458 136334458 1 + G A rs34048304 136334458 - 136334438 136334478 41 CAGGGGCGGGGGGTGATGGGCAGAACCTAGGGGCCCCAGCA CAGGGGCGGGGGGTGATGGGTAGAACCTAGGGGCCCCAGCA Direct Gain 0 0.963841138409267 0 0.0168604850769043 prediction 0.927682276818535 Functional Gain - CACFD1 ENSG00000160325 UTR3 Human protein_coding chr9:136334458 chr9:136334458 . . 0 21 hPsi_associated_SNPs_103510 0 0 0 0 0 Ribosome 0 0.438718592995103 0 0 hPsi_site_2470 iPseU_CNN:0;iRNA_PseU:0 2471 chr11 55579557 55579557 1 + G A HNSC 55579557 - 55579537 55579577 41 ATGATGGTAACACTCTCATTCAAAGTGGCCACCAGGAACAG ATGATGGTAACACTCTCATTTAAAGTGGCCACCAGGAACAG Direct Gain 0 0.963831230947431 0 0.998254656791687 prediction 0.927662461894862 Functional Gain - OR5L1 ENSG00000186117 CDS Human other chr11:55579557 chr11:55579557 synonymous SNV . 0 21 hPsi_associated_SNPs_103511 0 0 0 0 0 unknown 0 0.438713937842888 0.996509313583374 0 hPsi_site_2471 iPseU_CNN:0.996509313583374;iRNA_PseU:0 2472 chr19 50764839 50764839 1 + C T SKCM 50764839 + 50764819 50764859 41 GAGGAGCGAGACCTGAAGGTCACCGACATCATCGTCTCCTT GAGGAGCGAGACCTGAAGGTTACCGACATCATCGTCTCCTT Direct Gain 0 0.963812486360786 0 0.999998390674591 prediction 0.927624972721572 Functional Gain - MYH14 ENSG00000105357 CDS Human protein_coding chr19:50764839 chr19:50764839 synonymous SNV . 0 21 hPsi_associated_SNPs_103512 0 0 0 0 1 cytosol 0 0.43701386394103 0.999996781349182 0 hPsi_site_2472 iPseU_CNN:0.999996781349182;iRNA_PseU:0 2473 chr20 2083812 2083812 1 + G A BLCA 2083812 - 2083792 2083832 41 GGGGCGTCGCAGCGGATCTTCTTGACCGCCACCCGGGCCCC GGGGCGTCGCAGCGGATCTTTTTGACCGCCACCCGGGCCCC Direct Gain 0 0.96380029906779 0 0.999989926815033 prediction 0.92760059813558 Functional Gain - STK35 ENSG00000125834 CDS Human protein_coding chr20:2083812 chr20:2083812 synonymous SNV . 0 21 hPsi_associated_SNPs_103513 0 0 0 0 0 Ribosome 0 0.438718593706949 0.999979853630066 0 hPsi_site_2473 iPseU_CNN:0.999979853630066;iRNA_PseU:0 2474 chr19 58051251 58051251 1 + G A rs192430331 58051251 - 58051231 58051271 41 ACACATTCACTCTTCTTGGCCACAATCTTTTCTACTCTGTT ACACATTCACTCTTCTTGGCTACAATCTTTTCTACTCTGTT Direct Gain 0 0.963798324680621 0 0.983096361160278 prediction 0.927596649361241 Functional Gain - ZNF549 ENSG00000121406 UTR3 Human protein_coding chr19:58051251 chr19:58051251 . . 0 21 hPsi_associated_SNPs_103514 0 0 0 0 0 exosome 0 0.439066425710253 0.966192722320556 0 hPsi_site_2474 iPseU_CNN:0.966192722320556;iRNA_PseU:0 2475 chrX 128896740 128896740 1 + G A UCEC 128896740 - 128896720 128896760 41 TGGTGGCAGTTTACCTTGGTCTTTGCTTCTACCACGAGAGC TGGTGGCAGTTTACCTTGGTTTTTGCTTCTACCACGAGAGC Direct Gain 0 0.963748934071629 0 0.612273514270782 prediction 0.927497868143258 Functional Gain - XPNPEP2 ENSG00000122121 CDS Human protein_coding chrX:128896740 chrX:128896740 synonymous SNV . 0 21 hPsi_associated_SNPs_103515 0 0 0 0 0 exosome 0 0.43871054971517 0.224547028541564 0 hPsi_site_2475 iPseU_CNN:0.224547028541564;iRNA_PseU:0 2476 chr9 84606642 84606642 1 + C A rs139704066 84606642 - 84606622 84606662 41 AGGAAATCACCCCTTTTTTTGACTTGTCTCTCCAGGAGTGC AGGAAATCACCCCTTTTTTTTACTTGTCTCTCCAGGAGTGC Direct Gain 0 0.963746721569201 0 0.214535176753998 prediction 0.927493443138402 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84606642 chr9:84606642 synonymous SNV . 0 21 hPsi_associated_SNPs_103516 0 0 0 0 0 exosome 0 0.438720369295992 0 0 hPsi_site_2476 iPseU_CNN:0;iRNA_PseU:0 2477 chr4 69968602 69968602 1 + G A UCEC 69968602 - 69968582 69968622 41 ACGTTGGCCCTTTCTTCTGTCATGTTACTGACCATTGACCC ACGTTGGCCCTTTCTTCTGTTATGTTACTGACCATTGACCC Direct Gain 0 0.963742787589221 0 0.207593709230423 prediction 0.927485575178441 Functional Gain - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69968602 chr4:69968602 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_103517 0 0 0 0 0 Endoplasmic reticulum 0 0.438717124612261 0 0 hPsi_site_2477 iPseU_CNN:0;iRNA_PseU:0 2478 chr22 19771064 19771064 1 + C A rs41258424 19771064 - 19771044 19771084 41 AGAGACCAGGGACAGTGGGGGTCTCACTCTGTCACCCAGGC AGAGACCAGGGACAGTGGGGTTCTCACTCTGTCACCCAGGC Direct Gain 0 0.963741468544532 0 0.99988067150116 prediction 0.927482937089064 Functional Gain - TBX1 ENSG00000184058;ENSG00000185838 UTR3 Human other chr22:19771064 chr22:19771064 . . 0 21 hPsi_associated_SNPs_103518 0 0 0 0 0 chromatin 0 0.439163587872728 0.99976134300232 0 hPsi_site_2478 iPseU_CNN:0.99976134300232;iRNA_PseU:0 2479 chr4 145636576 145636576 1 + G A COAD 145636576 - 145636556 145636596 41 AGATTGTACAGTACCTAGTTCATCTTCTCCAAATCCCAAGA AGATTGTACAGTACCTAGTTTATCTTCTCCAAATCCCAAGA Direct Gain 0 0.963727593361401 0 0.514806807041168 prediction 0.927455186722802 Functional Gain - HHIP ENSG00000164161 CDS Human protein_coding chr4:145636576 chr4:145636576 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_103519 0 0 0 0 0 cytosol 0 0.438718680883896 0.029613614082336 0 hPsi_site_2479 iPseU_CNN:0.029613614082336;iRNA_PseU:0 2480 chr8 107704962 107704962 1 + G T UCEC 107704962 + 107704942 107704982 41 AAAAAAAAAAAAAGAATCCTGATGTCCATCCAACAGAAGCA AAAAAAAAAAAAAGAATCCTTATGTCCATCCAACAGAAGCA Direct Gain 0 0.96372385142801 0 0.889054238796234 prediction 0.927447702856019 Functional Gain - OXR1 ENSG00000164830 CDS Human protein_coding chr8:107704962 chr8:107704962 nonsynonymous SNV 0.981 4 21 hPsi_associated_SNPs_103520 0 0 1 0 1 chromatin 0 0.438718598981135 0.778108477592468 0 hPsi_site_2480 iPseU_CNN:0.778108477592468;iRNA_PseU:0 2481 chr3 11058933 11058933 1 + G T BLCA 11058933 + 11058913 11058953 41 AGCAAGGTGGCCGACGGGCAGATCTCCACCGAGGTCAGCGA AGCAAGGTGGCCGACGGGCATATCTCCACCGAGGTCAGCGA Direct Gain 0 0.963722551316222 0 0.854921579360962 prediction 0.927445102632445 Functional Gain - SLC6A1 ENSG00000157103 CDS Human protein_coding chr3:11058933 chr3:11058933 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103521 0 0 0 0 1 Endoplasmic reticulum 0 0.43872298513559 0.709843158721924 0 hPsi_site_2481 iPseU_CNN:0.709843158721924;iRNA_PseU:0 2482 chr20 19867406 19867406 1 + C A rs73901320 19867406 - 19867386 19867426 41 ACCGTAGTTTGAGAGGCTGTGAAATTCCTCCAGACTTGTAC ACCGTAGTTTGAGAGGCTGTTAAATTCCTCCAGACTTGTAC Direct Gain 0 0.963721265618602 0 0.931975960731506 prediction 0.927442531237204 Functional Gain - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19867406 chr20:19867406 nonsynonymous SNV 0.406 0 21 hPsi_associated_SNPs_103522 0 0 0 0 0 Nucleus 0 0.43871862356565 0.863951921463012 0 hPsi_site_2482 iPseU_CNN:0.863951921463012;iRNA_PseU:0 2483 chr17 38349980 38349980 1 + C T BLCA 38349980 + 38349960 38350000 41 TATGTGCGCCAGTTTCAGGTCATCGACAACCAGAACCTCCT TATGTGCGCCAGTTTCAGGTTATCGACAACCAGAACCTCCT Direct Gain 0 0.963716986383555 0 0.990427374839783 prediction 0.92743397276711 Functional Gain - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38349980 chr17:38349980 synonymous SNV . 0 21 hPsi_associated_SNPs_103523 0 0 0 0 1 chromatin 0 0.438718592856263 0.980854749679566 0 hPsi_site_2483 iPseU_CNN:0.980854749679566;iRNA_PseU:0 2484 chr17 48680195 48680195 1 + G T COAD 48680195 + 48680175 48680215 41 TTGCAGGAACGCATCTTCCTGACCCTCTCCAATTACATCTT TTGCAGGAACGCATCTTCCTTACCCTCTCCAATTACATCTT Direct Gain 0 0.963709538181025 0 0.999975323677063 prediction 0.92741907636205 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48680195 chr17:48680195 synonymous SNV . 0 21 hPsi_associated_SNPs_103524 0 0 0 0 2 exosome 0 0.438798595721993 0.999950647354126 0 hPsi_site_2484 iPseU_CNN:0.999950647354126;iRNA_PseU:0 2485 chr16 20803432 20803432 1 + G A SKCM 20803432 - 20803412 20803452 41 CCCAGAGGATAATATGACATCATCTGCTCTTGCAACAAACC CCCAGAGGATAATATGACATTATCTGCTCTTGCAACAAACC Direct Gain 0 0.963705592352311 0 0.736258924007416 prediction 0.927411184704622 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20803432 chr16:20803432 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103525 0 0 0 0 0 Endoplasmic reticulum 0 0.438718102412258 0.472517848014832 0 hPsi_site_2485 iPseU_CNN:0.472517848014832;iRNA_PseU:0 2486 chr12 53647509 53647509 1 + C A LIHC 53647509 - 53647489 53647529 41 AGGTGGCGATACGGTACAGGGAAGAGCCAAGCAGGCTGGCT AGGTGGCGATACGGTACAGGTAAGAGCCAAGCAGGCTGGCT Direct Gain 0 0.963705279320641 0 0.999745726585388 prediction 0.927410558641282 Functional Gain - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647509 chr12:53647509 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_103526 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593201478 0.999491453170776 0 hPsi_site_2486 iPseU_CNN:0.999491453170776;iRNA_PseU:0 2487 chr17 7807738 7807738 1 + C T rs146907233 7807738 + 7807718 7807758 41 AGAAGGAGACCCCCAGTGTTCATTCATTCTGTTGCCCTTCA AGAAGGAGACCCCCAGTGTTTATTCATTCTGTTGCCCTTCA Direct Gain 0 0.963704432446853 0 0.976775646209717 prediction 0.927408864893706 Functional Gain - CHD3 ENSG00000170004 UTR3 Human protein_coding chr17:7807738 chr17:7807738 . . 0 21 hPsi_associated_SNPs_103527 0 0 0 0 0 Cytosol 0 0.438741663255463 0.953551292419434 0 hPsi_site_2487 iPseU_CNN:0.953551292419434;iRNA_PseU:0 2488 chr8 99030281 99030281 1 + G A rs75614624 99030281 - 99030261 99030301 41 GCACTCGCACGTGTATGAGTCATCACTGTTCACACAAATGT GCACTCGCACGTGTATGAGTTATCACTGTTCACACAAATGT Direct Gain 0 0.963690074814777 0 0.968939661979675 prediction 0.927380149629554 Functional Gain - MATN2 ENSG00000132561 CDS Human protein_coding chr8:99030281 chr8:99030281 nonsynonymous SNV 0.024 1 21 hPsi_associated_SNPs_103528 0 0 0 0 0 Cytosol 0 0.453704414006693 0.93787932395935 0 hPsi_site_2488 iPseU_CNN:0.93787932395935;iRNA_PseU:0 2489 chr18 60646292 60646292 1 + C T LUAD 60646292 + 60646272 60646312 41 GCAGAGGCCAGTGATGAGGGCATTGTCATCAGCGCCAACGA GCAGAGGCCAGTGATGAGGGTATTGTCATCAGCGCCAACGA Direct Gain 0 0.963677351217014 0 0.98517382144928 prediction 0.927354702434028 Functional Gain - PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60646292 chr18:60646292 synonymous SNV . 0 21 hPsi_associated_SNPs_103529 0 0 1 0 0 Cytosol 0 0.439012259549187 0.97034764289856 0 hPsi_site_2489 iPseU_CNN:0.97034764289856;iRNA_PseU:0 2490 chr3 42675201 42675201 1 + G A SARC 42675201 - 42675181 42675221 41 GGTTCTGCAGTAACAACAGGCATATCTCTTCTCAGTAAAAA GGTTCTGCAGTAACAACAGGTATATCTCTTCTCAGTAAAAA Direct Gain 0 0.963675665943655 0 0.948997497558594 prediction 0.927351331887309 Functional Gain - NKTR ENSG00000114857 CDS Human protein_coding chr3:42675201 chr3:42675201 nonsynonymous SNV 0.974 2 21 hPsi_associated_SNPs_103530 0 0 0 0 0 Nucleus 0 0.438718806207426 0.897994995117188 0 hPsi_site_2490 iPseU_CNN:0.897994995117188;iRNA_PseU:0 2491 chr15 42126970 42126970 1 + G T UCEC 42126970 + 42126950 42126990 41 CTCTTGCTGTGCCCTACCTGGACAAACCCCCAACTCCGCTC CTCTTGCTGTGCCCTACCTGTACAAACCCCCAACTCCGCTC Direct Gain 0 0.963667008240039 0 0.999989688396454 prediction 0.927334016480077 Functional Gain - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42126970 chr15:42126970 nonsynonymous SNV 0.971 2 21 hPsi_associated_SNPs_103531 0 0 0 0 0 unknown 0 0.43879429420976 0.999979376792908 0 hPsi_site_2491 iPseU_CNN:0.999979376792908;iRNA_PseU:0 2492 chr17 41338394 41338394 1 + C T rs79648394 41338394 + 41338374 41338414 41 GGCAGGGAAGAAGCCACTTGCACATTACTCTTCACTGGTGA GGCAGGGAAGAAGCCACTTGTACATTACTCTTCACTGGTGA Direct Gain 0 0.963662004828153 0 0.101487189531326 prediction 0.927324009656306 Functional Gain - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41338394 chr17:41338394 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103532 0 0 1 0 1 Cytosol 0 0.438619526217978 0 0 hPsi_site_2492 iPseU_CNN:0;iRNA_PseU:0 2493 chr2 73653612 73653612 1 + C T SKCM 73653612 + 73653592 73653632 41 GGGAAGGTTGAGTCTGACGTCATTACTCTGGATGGCCTAAA GGGAAGGTTGAGTCTGACGTTATTACTCTGGATGGCCTAAA Direct Gain 0 0.963658789354421 0 0.982757449150085 prediction 0.927317578708842 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73653612 chr2:73653612 synonymous SNV . 0 21 hPsi_associated_SNPs_103533 0 0 1 0 2 Nucleus 0 0.440128305223494 0.96551489830017 0 hPsi_site_2493 iPseU_CNN:0.96551489830017;iRNA_PseU:0 2494 chr1 186276741 186276741 1 + G T READ 186276741 + 186276721 186276761 41 CTCACGCCCACCACCCCCGAGAAGCTCGCACCCACCACCCC CTCACGCCCACCACCCCCGATAAGCTCGCACCCACCACCCC Direct Gain 0 0.963654026872333 0 0.997297883033752 prediction 0.927308053744665 Functional Gain - PRG4 ENSG00000116690 CDS Human protein_coding chr1:186276741 chr1:186276741 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_103534 0 0 0 0 0 nucleoplasm 0 0.438718280590165 0.994595766067504 0 hPsi_site_2494 iPseU_CNN:0.994595766067504;iRNA_PseU:0 2495 chr20 47591341 47591341 1 + G A GBM 47591341 - 47591321 47591361 41 ACCATGCACTTGAGAATGGACACGAGGCACTCCAGGCCTTT ACCATGCACTTGAGAATGGATACGAGGCACTCCAGGCCTTT Direct Gain 0 0.963639572925238 0 0.999747753143311 prediction 0.927279145850475 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47591341 chr20:47591341 synonymous SNV . 0 21 hPsi_associated_SNPs_103535 0 0 0 0 0 Cytosol 0 0.438718711169095 0.999495506286622 0 hPsi_site_2495 iPseU_CNN:0.999495506286622;iRNA_PseU:0 2496 chr20 13767988 13767988 1 + G T GBM 13767988 + 13767968 13768008 41 GGATCGCAGACCGTGTATATGACATACCCAGGTAAGTGGTG GGATCGCAGACCGTGTATATTACATACCCAGGTAAGTGGTG Direct Gain 0 0.963638833582838 0 0.999676704406738 prediction 0.927277667165676 Functional Gain - NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13767988 chr20:13767988 nonsynonymous SNV 0.986 5 21 hPsi_associated_SNPs_103536 0 0 1 0 2 Ribosome 0 0.435839072165175 0.999353408813476 0 hPsi_site_2496 iPseU_CNN:0.999353408813476;iRNA_PseU:0 2497 chr5 140175215 140175215 1 + C T LUSC 140175215 + 140175195 140175235 41 GATGGGGGCAAACCTGAGCTCACGGGCACCGTTCAAATACT GATGGGGGCAAACCTGAGCTTACGGGCACCGTTCAAATACT Direct Gain 0 0.963636577228714 0 0.999945223331451 prediction 0.927273154457428 Functional Gain - PCDHA2 ENSG00000204969 CDS Human protein_coding chr5:140175215 chr5:140175215 synonymous SNV . 0 21 hPsi_associated_SNPs_103537 0 0 0 0 0 insoluble cytoplasm 0 0.438718592982377 0.999890446662902 0 hPsi_site_2497 iPseU_CNN:0.999890446662902;iRNA_PseU:0 2498 chr20 32379086 32379086 1 + G A BLCA 32379086 - 32379066 32379106 41 AGCCCAGCCCCTGTGTCCTTCAGCTCCTCCAGCCCCAGCGG AGCCCAGCCCCTGTGTCCTTTAGCTCCTCCAGCCCCAGCGG Direct Gain 0 0.963633383830268 0 0.996934413909912 prediction 0.927266767660535 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32379086 chr20:32379086 synonymous SNV . 0 21 hPsi_associated_SNPs_103538 0 0 0 0 0 chromatin 0 0.438722371459232 0.993868827819824 0 hPsi_site_2498 iPseU_CNN:0.993868827819824;iRNA_PseU:0 2499 chr22 37267715 37267715 1 + C T COAD 37267715 + 37267695 37267735 41 AAGAGCGTGTCCCCACAGGGCAACAGCGTTGACCGCATGGC AAGAGCGTGTCCCCACAGGGTAACAGCGTTGACCGCATGGC Direct Gain 0 0.963617219488194 0 0.951457858085632 prediction 0.927234438976387 Functional Gain - NCF4 ENSG00000100365 CDS Human protein_coding chr22:37267715 chr22:37267715 synonymous SNV . 0 21 hPsi_associated_SNPs_103539 0 0 0 0 2 exosome 0 0.438719124246451 0.902915716171264 0 hPsi_site_2499 iPseU_CNN:0.902915716171264;iRNA_PseU:0 2500 chr2 155307062 155307062 1 + G A SKCM 155307062 - 155307042 155307082 41 GGCTTGGAGGACATGATCTTCATGTGCCCAAGGTCATGTTC GGCTTGGAGGACATGATCTTTATGTGCCCAAGGTCATGTTC Direct Gain 0 0.963600717262053 0 0.999614596366882 prediction 0.927201434524106 Functional Gain - GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155307062 chr2:155307062 synonymous SNV . 0 21 hPsi_associated_SNPs_103540 0 0 0 0 0 Nucleus 0 0.436326179435458 0.999229192733764 0 hPsi_site_2500 iPseU_CNN:0.999229192733764;iRNA_PseU:0 2501 chr5 31552908 31552908 1 + G A COAD 31552908 - 31552888 31552928 41 TTGAATAGTGTCAACTTGGTCAGAAGGACAGTAATCATCCA TTGAATAGTGTCAACTTGGTTAGAAGGACAGTAATCATCCA Direct Gain 0 0.963596297063534 0 0.99900758266449 prediction 0.927192594127068 Functional Gain - C5orf22 ENSG00000082213 CDS Human protein_coding chr5:31552908 chr5:31552908 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_103541 0 0 0 0 0 Ribosome 0 0.438935402003783 0.99801516532898 0 hPsi_site_2501 iPseU_CNN:0.99801516532898;iRNA_PseU:0 2502 chr11 6866955 6866955 1 + C T BLCA 6866955 + 6866935 6866975 41 GAAATAAGTGAATTTATCCTCATGAGCTTCTCTTCCCTACC GAAATAAGTGAATTTATCCTTATGAGCTTCTCTTCCCTACC Direct Gain 0 0.963593573194893 0 0.999838590621948 prediction 0.927187146389785 Functional Gain - OR10A5 ENSG00000166363 CDS Human protein_coding chr11:6866955 chr11:6866955 synonymous SNV . 0 21 hPsi_associated_SNPs_103542 0 0 0 0 0 unknown 0 0.43871888584727 0.999677181243896 0 hPsi_site_2502 iPseU_CNN:0.999677181243896;iRNA_PseU:0 2503 chr3 38139354 38139354 1 + G A BLCA 38139354 - 38139334 38139374 41 AGGGAGACTGGGCTCTCCTTCATGCGCCATGTGGCTGGGAG AGGGAGACTGGGCTCTCCTTTATGCGCCATGTGGCTGGGAG Direct Gain 0 0.963576493567805 0 0.9915931224823 prediction 0.927152987135609 Functional Gain - DLEC1 ENSG00000008226 CDS Human protein_coding chr3:38139354 chr3:38139354 nonsynonymous SNV 0.922 0 21 hPsi_associated_SNPs_103543 0 0 0 0 0 chromatin 0 0.438718628820698 0.9831862449646 0 hPsi_site_2503 iPseU_CNN:0.9831862449646;iRNA_PseU:0 2504 chr13 24797604 24797604 1 + C T UCEC 24797604 + 24797584 24797624 41 CTCAGGCCAGCAGAGTGGGGCACATTGGATGGCTCCGACCT CTCAGGCCAGCAGAGTGGGGTACATTGGATGGCTCCGACCT Direct Gain 0 0.963563790524977 0 0.999963879585266 prediction 0.927127581049955 Functional Gain - SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24797604 chr13:24797604 synonymous SNV . 0 21 hPsi_associated_SNPs_103544 0 0 0 0 0 Cytosol 0 0.438738757705337 0.999927759170532 0 hPsi_site_2504 iPseU_CNN:0.999927759170532;iRNA_PseU:0 2505 chr17 80439027 80439027 1 + C T BLCA 80439027 + 80439007 80439047 41 ACAAGAAGCTGGAGGCTCTTCAGGAAAGCCTTCCCCCTGCT ACAAGAAGCTGGAGGCTCTTTAGGAAAGCCTTCCCCCTGCT Direct Gain 0 0.963563752486552 0 0.960954546928406 prediction 0.927127504973104 Functional Gain - NARF ENSG00000141562 CDS Human protein_coding chr17:80439027 chr17:80439027 stopgain 0.894 1 21 hPsi_associated_SNPs_103545 0 0 1 0 1 Cytosol 0 0.434878819608019 0.921909093856812 0 hPsi_site_2505 iPseU_CNN:0.921909093856812;iRNA_PseU:0 2506 chr6 30881724 30881724 1 + C T BLCA 30881724 + 30881704 30881744 41 CCGGCCGGGCACAGCGACGTCAAGCGCTTTTGGAAGCGGCA CCGGCCGGGCACAGCGACGTTAAGCGCTTTTGGAAGCGGCA Direct Gain 0 0.96355772381388 0 0.97939270734787 prediction 0.92711544762776 Functional Gain - GTF2H4 ENSG00000213780 CDS Human protein_coding chr6:30881724 chr6:30881724 synonymous SNV . 0 21 hPsi_associated_SNPs_103546 0 0 1 0 0 chromatin 0 0.438718595186617 0.95878541469574 0 hPsi_site_2506 iPseU_CNN:0.95878541469574;iRNA_PseU:0 2507 chr15 94516964 94516964 1 + G T rs534738732 94516964 + 94516944 94516984 41 AAAAACATTTTTAAATTCATGATTTCCCCCCCCAGATTTTA AAAAACATTTTTAAATTCATTATTTCCCCCCCCAGATTTTA Direct Gain 0 0.963527265301239 0 0.150767117738724 prediction 0.927054530602478 Functional Gain - LINC01580 ENSG00000258785 ncRNA_exonic Human lincRNA chr15:94516964 chr15:94516964 . . 0 21 hPsi_associated_SNPs_103547 0 0 0 0 0 unknown 0 0.438718592995102 0 0 hPsi_site_2507 iPseU_CNN:0;iRNA_PseU:0 2508 chr18 73835057 73835057 1 + C T rs140188715 73835057 + 73835037 73835077 41 GGGCCCGCACATGCCCTGCTCATCTCAAAACTTCTCGAGAA GGGCCCGCACATGCCCTGCTTATCTCAAAACTTCTCGAGAA Direct Gain 0 0.963524109116167 0 0.998962998390198 prediction 0.927048218232334 Functional Gain - LOC339298 ENSG00000263547 ncRNA_exonic Human processed_transcript chr18:73835057 chr18:73835057 . . 0 21 hPsi_associated_SNPs_103548 0 0 0 0 0 unknown 0 0.438718593035512 0.997925996780396 0 hPsi_site_2508 iPseU_CNN:0.997925996780396;iRNA_PseU:0 2509 chr11 314332 314332 1 + C T SARC 314332 + 314312 314352 41 AACTGGTGCTGTCTGGGCTTCATAGCATTCGCCTACTCCGT AACTGGTGCTGTCTGGGCTTTATAGCATTCGCCTACTCCGT Direct Gain 0 0.963515532712217 0 0.998886942863464 prediction 0.927031065424433 Functional Gain - IFITM1 ENSG00000185885 CDS Human protein_coding chr11:314332 chr11:314332 synonymous SNV . 0 21 hPsi_associated_SNPs_103549 0 0 1 0 1 Ribosome 0 0.438718592995102 0.997773885726928 0 hPsi_site_2509 iPseU_CNN:0.997773885726928;iRNA_PseU:0 2510 chr19 52090786 52090786 1 + C A MESO 52090786 - 52090766 52090806 41 TAATGAGGGTTGAGTTTTGGGAGAAGCCTTTGCCACATTCA TAATGAGGGTTGAGTTTTGGTAGAAGCCTTTGCCACATTCA Direct Gain 0 0.963513993339928 0 0.550272464752197 prediction 0.927027986679856 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090786 chr19:52090786 nonsynonymous SNV 0.947 3 21 hPsi_associated_SNPs_103550 0 0 0 0 0 chromatin 0 0.438716072660009 0.100544929504394 0 hPsi_site_2510 iPseU_CNN:0.100544929504394;iRNA_PseU:0 2511 chr20 62565622 62565622 1 + C T rs3206771 62565622 + 62565602 62565642 41 AGAGGTGGTGAGTCCTGGGGCAGCTTCCGCGCCTCCCTGTC AGAGGTGGTGAGTCCTGGGGTAGCTTCCGCGCCTCCCTGTC Direct Gain 0 0.963508332158657 0 0.978803157806396 prediction 0.927016664317315 Functional Gain - DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62565622 chr20:62565622 . . 0 21 hPsi_associated_SNPs_103551 1 0 1 0 0 Ribosome 0 0.438720221291692 0.957606315612792 0 hPsi_site_2511 iPseU_CNN:0.957606315612792;iRNA_PseU:0 2512 chr15 89012195 89012195 1 + C T rs187163425 89012195 + 89012175 89012215 41 AGGTTGCAGTGAGCCAAGATCACGCCACTGTACTCCAGCCT AGGTTGCAGTGAGCCAAGATTACGCCACTGTACTCCAGCCT Direct Gain 0 0.963494392877107 0 0.986639976501465 prediction 0.926988785754215 Functional Gain - MRPS11 ENSG00000173867 ncRNA_intronic Human processed_transcript chr15:89012195 chr15:89012195 . . 0 21 hPsi_associated_SNPs_103552 0 0 1 0 0 Ribosome 0 0.435420332178887 0.97327995300293 0 hPsi_site_2512 iPseU_CNN:0.97327995300293;iRNA_PseU:0 2513 chrX 41077641 41077641 1 + A T COAD 41077641 + 41077621 41077661 41 TTAGGTATGATGCATTGTGTATTCTCCTTCGTCACAGCAAG TTAGGTATGATGCATTGTGTTTTCTCCTTCGTCACAGCAAG Direct Gain 0 0.963491596793439 0 0.996185421943665 prediction 0.926983193586879 Functional Gain - USP9X ENSG00000124486 CDS Human protein_coding chrX:41077641 chrX:41077641 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103553 0 0 1 0 1 Nucleus 0 0.438716435311044 0.99237084388733 0 hPsi_site_2513 iPseU_CNN:0.99237084388733;iRNA_PseU:0 2514 chrX 37553734 37553734 1 + C T COAD 37553734 + 37553714 37553754 41 GTGATCCAGGCTTTCTTGGGCTCAGCCCCCCAGCTGACCCT GTGATCCAGGCTTTCTTGGGTTCAGCCCCCCAGCTGACCCT Direct Gain 0 0.963482767336588 0 0.584498524665833 prediction 0.926965534673176 Functional Gain - XK ENSG00000047597 CDS Human protein_coding chrX:37553734 chrX:37553734 synonymous SNV . 0 21 hPsi_associated_SNPs_103554 0 0 1 0 1 Endoplasmic reticulum 0 0.438718592995124 0.168997049331666 0 hPsi_site_2514 iPseU_CNN:0.168997049331666;iRNA_PseU:0 2515 chr7 148463701 148463701 1 + C T LUAD 148463701 + 148463681 148463721 41 GAAGAGTTCAGGTTTACCTTCATGAAAGCACACAAGATGAA GAAGAGTTCAGGTTTACCTTTATGAAAGCACACAAGATGAA Direct Gain 0 0.963478580785635 0 0.995516657829285 prediction 0.926957161571271 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148463701 chr7:148463701 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_103555 0 0 1 0 1 Nucleus 0 0.43900359193856 0.99103331565857 0 hPsi_site_2515 iPseU_CNN:0.99103331565857;iRNA_PseU:0 2516 chr2 46607122 46607122 1 + T A rs183088226 46607122 - 46607102 46607142 41 CTTCACCCTGCACATTGAGAAATGTTCTCCTCTCCCCATCC CTTCACCCTGCACATTGAGATATGTTCTCCTCTCCCCATCC Direct Gain 0 0.96347127307077 0 0.999978244304657 prediction 0.92694254614154 Functional Gain - EPAS1 ENSG00000116016 intronic Human protein_coding chr2:46607122 chr2:46607122 . . 0 21 hPsi_associated_SNPs_103556 0 0 0 0 0 Cytosol 0 0.438719707402377 0.999956488609314 0 hPsi_site_2516 iPseU_CNN:0.999956488609314;iRNA_PseU:0 2517 chr19 22271507 22271507 1 + G A LUAD 22271507 - 22271487 22271527 41 AAAGGCTTTGCCACACTCTTCACATTTGTAGGGTTTCTCTC AAAGGCTTTGCCACACTCTTTACATTTGTAGGGTTTCTCTC Direct Gain 0 0.963470545453521 0 0.99921315908432 prediction 0.926941090907042 Functional Gain - ZNF257 ENSG00000197134 CDS Human protein_coding chr19:22271507 chr19:22271507 nonsynonymous SNV 0.411 0 21 hPsi_associated_SNPs_103557 0 0 0 0 0 chromatin 0 0.438326337768309 0.99842631816864 0 hPsi_site_2517 iPseU_CNN:0.99842631816864;iRNA_PseU:0 2518 chrX 77298190 77298190 1 + C A LUAD 77298190 - 77298170 77298210 41 GCCAGAGCTGGGGAGTCATTGATTCCATCTCCCACCATTGC GCCAGAGCTGGGGAGTCATTTATTCCATCTCCCACCATTGC Direct Gain 0 0.963462570431529 0 0.999681532382965 prediction 0.926925140863057 Functional Gain - ATP7A ENSG00000165240 CDS Human protein_coding chrX:77298190 chrX:77298190 synonymous SNV . 0 21 hPsi_associated_SNPs_103558 0 0 0 0 0 Ribosome 0 0.439478441244703 0.99936306476593 0 hPsi_site_2518 iPseU_CNN:0.99936306476593;iRNA_PseU:0 2519 chr19 39589715 39589715 1 + C A rs201971377 39589715 - 39589695 39589735 41 AGCCGGGGGACGGCCTTCGGGTTGTCAGCCCCCAGGTCTCC AGCCGGGGGACGGCCTTCGGTTTGTCAGCCCCCAGGTCTCC Direct Gain 0 0.963461954388755 0 0.999994099140167 prediction 0.92692390877751 Functional Gain - ACP7 ENSG00000183760 CDS Human protein_coding chr19:39589715 chr19:39589715 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_103559 0 0 1 0 0 exosome 0 0.438718551941732 0.999988198280334 0 hPsi_site_2519 iPseU_CNN:0.999988198280334;iRNA_PseU:0 2520 chr7 75694225 75694225 1 + C A STAD 75694225 - 75694205 75694245 41 AGGTACATTCCGTTTCCTGTGACTTAACGAAGGAACATTCC AGGTACATTCCGTTTCCTGTTACTTAACGAAGGAACATTCC Direct Gain 0 0.96344933730955 0 0.998478412628174 prediction 0.926898674619101 Functional Gain - MDH2 ENSG00000146701 CDS Human protein_coding chr7:75694225 chr7:75694225 stopgain 0.296 1 21 hPsi_associated_SNPs_103560 0 0 0 0 0 Cytosol 0 0.438712229195768 0.996956825256348 0 hPsi_site_2520 iPseU_CNN:0.996956825256348;iRNA_PseU:0 2521 chr22 24236679 24236679 1 + A T ACC 24236679 + 24236659 24236699 41 ATCATGCCGATGTTCATCGTAAACACCAACGTGCCCCGCGC ATCATGCCGATGTTCATCGTTAACACCAACGTGCCCCGCGC Direct Gain 0 0.963435582445847 0 1 prediction 0.926871164891694 Functional Gain - MIF ENSG00000240972 CDS Human protein_coding chr22:24236679 chr22:24236679 synonymous SNV . 0 21 hPsi_associated_SNPs_103561 0 0 1 0 1 Ribosome 0 0.438718593408621 1 0 hPsi_site_2521 iPseU_CNN:1;iRNA_PseU:0 2522 chrX 153036515 153036515 1 + C T LUAD 153036515 + 153036495 153036535 41 ACAGCAGGGGATTCAGGCCTCATCCACTGCCAGGCCCACCA ACAGCAGGGGATTCAGGCCTTATCCACTGCCAGGCCCACCA Direct Gain 0 0.963430783849877 0 0.999999046325684 prediction 0.926861567699753 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153036515 chrX:153036515 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103562 0 0 0 0 2 Endoplasmic reticulum 0 0.438718593057662 0.999998092651368 0 hPsi_site_2522 iPseU_CNN:0.999998092651368;iRNA_PseU:0 2523 chr2 131785584 131785584 1 + A T SKCM 131785584 + 131785564 131785604 41 GGGGAGCGAGGAGGACCTGTATGATGACCTGCACAGCTCCA GGGGAGCGAGGAGGACCTGTTTGATGACCTGCACAGCTCCA Direct Gain 0 0.96342614772051 0 0.995988190174103 prediction 0.92685229544102 Functional Gain - ARHGEF4 ENSG00000136002 CDS Human protein_coding chr2:131785584 chr2:131785584 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_103563 0 0 0 0 2 nucleus 0 0.43872590971774 0.991976380348206 0 hPsi_site_2523 iPseU_CNN:0.991976380348206;iRNA_PseU:0 2524 chrX 100748910 100748910 1 + G A rs781884780 100748910 - 100748890 100748930 41 GCCTCAATCCTAGAACAAATCATGGCCTCTTCCCCAGCCCC GCCTCAATCCTAGAACAAATTATGGCCTCTTCCCCAGCCCC Direct Gain 0 0.963408252233577 0 0.354130804538727 prediction 0.926816504467153 Functional Gain - ARMCX4 ENSG00000196440 CDS Human protein_coding chrX:100748910 chrX:100748910 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103564 0 0 0 0 0 exosome 0 0.438718592995102 0 0 hPsi_site_2524 iPseU_CNN:0;iRNA_PseU:0 2525 chr8 38684771 38684771 1 + C T LUAD 38684771 + 38684751 38684791 41 GGAGAAACTGGCATCCACGTCATGTGGTCAGAAATCAGCTG GGAGAAACTGGCATCCACGTTATGTGGTCAGAAATCAGCTG Direct Gain 0 0.963401637549078 0 0.451305896043777 prediction 0.926803275098156 Functional Gain - TACC1 ENSG00000147526 CDS Human protein_coding chr8:38684771 chr8:38684771 nonsynonymous SNV 0.956 1 21 hPsi_associated_SNPs_103565 0 0 1 0 2 Ribosome 0 0.438729853005986 0 0 hPsi_site_2525 iPseU_CNN:0;iRNA_PseU:0 2526 chr1 33562359 33562359 1 + G A UCEC 33562359 - 33562339 33562379 41 CTCAGCAAAGATGTCCACGCCACAGCCCTCTGGGAAGTACA CTCAGCAAAGATGTCCACGCTACAGCCCTCTGGGAAGTACA Direct Gain 0 0.963384412128886 0 0.561125695705414 prediction 0.926768824257771 Functional Gain - AZIN2 ENSG00000142920 CDS Human protein_coding chr1:33562359 chr1:33562359 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103566 0 0 0 0 0 Nucleus 0 0.438371397880294 0.122251391410828 0 hPsi_site_2526 iPseU_CNN:0.122251391410828;iRNA_PseU:0 2527 chr2 11777967 11777967 1 + C T UCEC 11777967 + 11777947 11777987 41 CTGCAGCACCACAGCCACCTCTTCTTCCCGCTGTCCCTGAA CTGCAGCACCACAGCCACCTTTTCTTCCCGCTGTCCCTGAA Direct Gain 0 0.96337750321679 0 0.867709875106812 prediction 0.92675500643358 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11777967 chr2:11777967 synonymous SNV . 0 21 hPsi_associated_SNPs_103567 0 0 1 0 1 Nucleus 0 0.438718592995102 0.735419750213624 0 hPsi_site_2527 iPseU_CNN:0.735419750213624;iRNA_PseU:0 2528 chr2 38893356 38893356 1 + C A OV 38893356 - 38893336 38893376 41 GCAGCTGGAACTTCTCCACTGTCCCTCCTCCCGAGGGCAGC GCAGCTGGAACTTCTCCACTTTCCCTCCTCCCGAGGGCAGC Direct Gain 0 0.963376014105566 0 0.999992489814758 prediction 0.926752028211132 Functional Gain - GALM ENSG00000143891 CDS Human protein_coding chr2:38893356 chr2:38893356 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_103568 0 0 0 0 0 Ribosome 0 0.438718559097162 0.999984979629516 0 hPsi_site_2528 iPseU_CNN:0.999984979629516;iRNA_PseU:0 2529 chr16 13003682 13003682 1 + C T rs80074058 13003682 + 13003662 13003702 41 TGTCTCCTTCCATTATCCCTCTCCTTCCCTCCTTCCCTTCC TGTCTCCTTCCATTATCCCTTTCCTTCCCTCCTTCCCTTCC Direct Gain 0 0.963362226069912 0 0.999519407749176 prediction 0.926724452139823 Functional Gain - SHISA9 ENSG00000237515 UTR3 Human protein_coding chr16:13003682 chr16:13003682 . . 0 21 hPsi_associated_SNPs_103569 0 0 0 0 0 exosome 0 0.438718592995026 0.999038815498352 0 hPsi_site_2529 iPseU_CNN:0.999038815498352;iRNA_PseU:0 2530 chr17 37809815 37809815 1 + G A BLCA 37809815 - 37809795 37809835 41 AGGCAGGCTGCGCTCCAAGTCTCGGGTCAGCTCCCTGGGCA AGGCAGGCTGCGCTCCAAGTTTCGGGTCAGCTCCCTGGGCA Direct Gain 0 0.963353355619357 0 0.951758146286011 prediction 0.926706711238713 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37809815 chr17:37809815 nonsynonymous SNV 0.607 3 21 hPsi_associated_SNPs_103570 0 0 0 0 0 Ribosome 0 0.438717377595802 0.903516292572022 0 hPsi_site_2530 iPseU_CNN:0.903516292572022;iRNA_PseU:0 2531 chr7 44080704 44080704 1 + C T BLCA 44080704 + 44080684 44080724 41 ACCTGGGGACCACCGCAGGTCACATTGATCCTGTCTCCCCC ACCTGGGGACCACCGCAGGTTACATTGATCCTGTCTCCCCC Direct Gain 0 0.963309797876736 0 0.97896671295166 prediction 0.926619595753472 Functional Gain - LINC00957 ENSG00000235314 ncRNA_exonic Human lincRNA chr7:44080704 chr7:44080704 . . 0 21 hPsi_associated_SNPs_103571 0 0 0 0 0 unknown 0 0.438687243776179 0.95793342590332 0 hPsi_site_2531 iPseU_CNN:0.95793342590332;iRNA_PseU:0 2532 chr2 203329608 203329608 1 + C A LGG 203329608 - 203329588 203329628 41 ATTGTCCCATTTTCATGAGAGATTCTACTCTCACCTATCCC ATTGTCCCATTTTCATGAGATATTCTACTCTCACCTATCCC Direct Gain 0 0.963298632965055 0 0.999563694000244 prediction 0.92659726593011 Functional Gain - BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203329608 chr2:203329608 synonymous SNV . 0 21 hPsi_associated_SNPs_103572 0 0 0 0 0 Ribosome 0 0.43855580163911 0.999127388000488 0 hPsi_site_2532 iPseU_CNN:0.999127388000488;iRNA_PseU:0 2533 chr5 71493130 71493130 1 + G A LUSC 71493130 - 71493110 71493150 41 GGTGACACCACTTCCAGAGTCTTGTCCTCAGGACTAGCACA GGTGACACCACTTCCAGAGTTTTGTCCTCAGGACTAGCACA Direct Gain 0 0.963288827515334 0 0.99965626001358 prediction 0.926577655030667 Functional Gain - MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493130 chr5:71493130 synonymous SNV . 0 21 hPsi_associated_SNPs_103573 0 0 0 0 0 Cytosol 0 0.444304975003691 0.99931252002716 0 hPsi_site_2533 iPseU_CNN:0.99931252002716;iRNA_PseU:0 2534 chr9 127220973 127220973 1 + G A UCEC 127220973 - 127220953 127220993 41 CGGTGCTGGAGATGAAAGGTCATGGCCACGTTGACCTCTCC CGGTGCTGGAGATGAAAGGTTATGGCCACGTTGACCTCTCC Direct Gain 0 0.96328055031699 0 0.998039901256561 prediction 0.92656110063398 Functional Gain - PSMB7;NR5A1 ENSG00000180264 CDS Human protein_coding chr9:127220973 chr9:127220973 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103574 0 0 0 0 0 unknown 0 0.438710716728296 0.996079802513122 0 hPsi_site_2534 iPseU_CNN:0.996079802513122;iRNA_PseU:0 2535 chr20 57020626 57020626 1 + C T rs187441988 57020626 + 57020606 57020646 41 GAATTCTTTTGTCATTTTGTCACATTTGCTCTATGGGGGGA GAATTCTTTTGTCATTTTGTTACATTTGCTCTATGGGGGGA Direct Gain 0 0.963261433884151 0 0.999991893768311 prediction 0.926522867768302 Functional Gain - VAPB ENSG00000124164 UTR3 Human protein_coding chr20:57020626 chr20:57020626 . . 0 21 hPsi_associated_SNPs_103575 2 0 1 2 0 Ribosome 0 0.438718495180832 0.999983787536622 0 hPsi_site_2535 iPseU_CNN:0.999983787536622;iRNA_PseU:0 2536 chr12 53342872 53342872 1 + G T rs7978102 53342872 + 53342852 53342892 41 GGGGCGGGGCCTCACTCTGCGATATAACTCGGGTCGCGCGG GGGGCGGGGCCTCACTCTGCTATATAACTCGGGTCGCGCGG Direct Gain 0 0.963256788212036 0 0.979723811149597 prediction 0.926513576424073 Functional Gain - KRT18 ENSG00000111057 UTR5 Human protein_coding chr12:53342872 chr12:53342872 . . 0 21 hPsi_associated_SNPs_103576 0 0 0 0 0 Cytosol 0 0.438718594085992 0.959447622299194 0 hPsi_site_2536 iPseU_CNN:0.959447622299194;iRNA_PseU:0 2537 chr7 23306199 23306199 1 + G T LGG 23306199 + 23306179 23306219 41 TGAAAACTGCCAGATTAACAGATATGGCCACTTTCAAGCCA TGAAAACTGCCAGATTAACATATATGGCCACTTTCAAGCCA Direct Gain 0 0.963255904139196 0 0.85622227191925 prediction 0.926511808278392 Functional Gain - GPNMB ENSG00000136235 CDS Human protein_coding chr7:23306199 chr7:23306199 nonsynonymous SNV 0.776 4 21 hPsi_associated_SNPs_103577 0 0 0 0 3 Endoplasmic reticulum 0 0.43871851415968 0.7124445438385 0 hPsi_site_2537 iPseU_CNN:0.7124445438385;iRNA_PseU:0 2538 chr19 41522804 41522804 1 + G A rs34749331 41522804 - 41522784 41522824 41 GGCAGGAAGTTGCGGGGAGTCAGAGCCATTGTCTACAGAGG GGCAGGAAGTTGCGGGGAGTTAGAGCCATTGTCTACAGAGG Direct Gain 0 0.963253547022147 0 1 prediction 0.926507094044295 Functional Gain - CYP2B6 ENSG00000197408 UTR3 Human protein_coding chr19:41522804 chr19:41522804 . . 0 21 hPsi_associated_SNPs_103578 0 0 0 0 0 Nucleus 0 0.438719085560316 1 0 hPsi_site_2538 iPseU_CNN:1;iRNA_PseU:0 2539 chr2 201534320 201534320 1 + T A HNSC 201534320 - 201534300 201534340 41 AAAACACGGAACACCCCAGGAACACCCCCGACTCTCCCAGA AAAACACGGAACACCCCAGGTACACCCCCGACTCTCCCAGA Direct Gain 0 0.963252114543609 0 0.999998927116394 prediction 0.926504229087218 Functional Gain - AOX1 ENSG00000138356 CDS Human protein_coding chr2:201534320 chr2:201534320 nonsynonymous SNV 0.987 4 21 hPsi_associated_SNPs_103579 0 0 0 0 0 Endoplasmic reticulum 0 0.4384096474464 0.999997854232788 0 hPsi_site_2539 iPseU_CNN:0.999997854232788;iRNA_PseU:0 2540 chr10 119003681 119003681 1 + G A BLCA 119003681 - 119003661 119003701 41 GGAACAGCGGACGCGTTGGTCACCATGTGCTGTGTGGCGGT GGAACAGCGGACGCGTTGGTTACCATGTGCTGTGTGGCGGT Direct Gain 0 0.963252100407915 0 0.837170362472534 prediction 0.92650420081583 Functional Gain - SLC18A2 ENSG00000165646 CDS Human protein_coding chr10:119003681 chr10:119003681 synonymous SNV . 0 21 hPsi_associated_SNPs_103580 0 0 0 0 0 nucleus 0 0.434837633711307 0.674340724945068 0 hPsi_site_2540 iPseU_CNN:0.674340724945068;iRNA_PseU:0 2541 chr10 25887483 25887483 1 + G A SKCM 25887483 - 25887463 25887503 41 GGGTTGACCCTTTGTTGTTTCATAATCCCAGATTTCTGAGG GGGTTGACCCTTTGTTGTTTTATAATCCCAGATTTCTGAGG Direct Gain 0 0.963251748119351 0 0.731342554092407 prediction 0.926503496238702 Functional Gain - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25887483 chr10:25887483 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103581 0 0 0 0 0 Endoplasmic reticulum 0 0.43855903969285 0.462685108184814 0 hPsi_site_2541 iPseU_CNN:0.462685108184814;iRNA_PseU:0 2542 chr19 55179353 55179353 1 + G A BLCA 55179353 - 55179333 55179373 41 CTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGA CTGTGCAGCTGGGCGTAGGTTACATCCTGGGGGGCTTCAGA Direct Gain 0 0.963248907847081 0 0.999995410442352 prediction 0.926497815694163 Functional Gain - LILRB4 ENSG00000186818 CDS Human protein_coding chr19:55179353 chr19:55179353 synonymous SNV . 0 21 hPsi_associated_SNPs_103582 0 0 0 0 0 exosome 0 0.43933853375508 0.999990820884704 0 hPsi_site_2542 iPseU_CNN:0.999990820884704;iRNA_PseU:0 2543 chr2 27804192 27804192 1 + C A rs200703695 27804192 - 27804172 27804212 41 GCAGTGGCTCCTCTGAGAGGGACTGTGATGTCTTCTCTCCA GCAGTGGCTCCTCTGAGAGGTACTGTGATGTCTTCTCTCCA Direct Gain 0 0.963221288447685 0 0.999612748622894 prediction 0.92644257689537 Functional Gain - C2orf16 ENSG00000221843 CDS Human protein_coding chr2:27804192 chr2:27804192 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_103583 0 0 0 0 0 chromatin 0 0.43896375764901 0.999225497245788 0 hPsi_site_2543 iPseU_CNN:0.999225497245788;iRNA_PseU:0 2544 chr5 126732300 126732300 1 + C T rs34649270 126732300 + 126732280 126732320 41 GGGGCTCTGTGCAACCCCATCACCGGGGCTTGCCACTGTGC GGGGCTCTGTGCAACCCCATTACCGGGGCTTGCCACTGTGC Direct Gain 0 0.963172883124666 0 0.98266988992691 prediction 0.926345766249332 Functional Gain - MEGF10 ENSG00000145794 CDS Human protein_coding chr5:126732300 chr5:126732300 synonymous SNV . 0 21 hPsi_associated_SNPs_103584 2 0 0 0 1 exosome 0 0.438718592995629 0.96533977985382 0 hPsi_site_2544 iPseU_CNN:0.96533977985382;iRNA_PseU:0 2545 chr1 23376915 23376915 1 + C T BLCA 23376915 + 23376895 23376935 41 CTTTCCAGAGCCGACTTCCTCATGACCGGATGACTTCTCAA CTTTCCAGAGCCGACTTCCTTATGACCGGATGACTTCTCAA Direct Gain 0 0.963171022940381 0 0.0953727662563324 prediction 0.926342045880762 Functional Gain - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23376915 chr1:23376915 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103585 0 0 1 0 2 Cytosol 0 0.438717439265533 0 0 hPsi_site_2545 iPseU_CNN:0;iRNA_PseU:0 2546 chr5 140719028 140719028 1 + G A COAD 140719028 - 140719008 140719048 41 GTACTTCTGAAGGGCGTTCTCACCTACGTCTGCATCATGCG GTACTTCTGAAGGGCGTTCTTACCTACGTCTGCATCATGCG Direct Gain 0 0.96316657881673 0 0.994660496711731 prediction 0.926333157633459 Functional Gain - PCDHGA2 ENSG00000081853 CDS Human protein_coding chr5:140719028 chr5:140719028 nonsynonymous SNV 0.965 0 21 hPsi_associated_SNPs_103586 0 0 0 0 0 exosome 0 0.438699600792776 0.989320993423462 0 hPsi_site_2546 iPseU_CNN:0.989320993423462;iRNA_PseU:0 2547 chr17 27182208 27182208 1 + C A COAD 27182208 - 27182188 27182228 41 GAGGCCAAGCGGGGACCAGAGAAAGCGGACCCCGCGACGCA GAGGCCAAGCGGGGACCAGATAAAGCGGACCCCGCGACGCA Direct Gain 0 0.963160799710488 0 0.999999701976776 prediction 0.926321599420975 Functional Gain - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27182208 chr17:27182208 nonsynonymous SNV 0.258 0 21 hPsi_associated_SNPs_103587 0 0 0 0 0 Ribosome 0 0.438718596356012 0.999999403953552 0 hPsi_site_2547 iPseU_CNN:0.999999403953552;iRNA_PseU:0 2548 chr21 43704748 43704748 1 + C T LGG 43704748 + 43704728 43704768 41 GGGGGTCGCTCCATCATTTGCACCATCCACCAGCCCAGCGC GGGGGTCGCTCCATCATTTGTACCATCCACCAGCCCAGCGC Direct Gain 0 0.963153409472768 0 0.996518850326538 prediction 0.926306818945536 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43704748 chr21:43704748 synonymous SNV . 0 21 hPsi_associated_SNPs_103588 0 0 0 0 2 Cytosol 0 0.438718680724435 0.993037700653076 0 hPsi_site_2548 iPseU_CNN:0.993037700653076;iRNA_PseU:0 2549 chr13 39262027 39262027 1 + G A UCEC 39262027 - 39262007 39262047 41 ACCAGAGGCAAGTTCCGAGTCACAACCTCCAGCTGGGTGAA ACCAGAGGCAAGTTCCGAGTTACAACCTCCAGCTGGGTGAA Direct Gain 0 0.963142738277925 0 0.999989151954651 prediction 0.92628547655585 Functional Gain - FREM2 ENSG00000150893 CDS Human protein_coding chr13:39262027 chr13:39262027 synonymous SNV . 0 21 hPsi_associated_SNPs_103589 0 0 0 0 0 exosome 0 0.438718593007195 0.999978303909302 0 hPsi_site_2549 iPseU_CNN:0.999978303909302;iRNA_PseU:0 2550 chr19 17392471 17392471 1 + C T rs552850321 17392471 + 17392451 17392491 41 GATAGTGGCACACCCGGTGGCATCCTCCCACCCGGGCTCTT GATAGTGGCACACCCGGTGGTATCCTCCCACCCGGGCTCTT Direct Gain 0 0.963138009525353 0 0.946620345115662 prediction 0.926276019050707 Functional Gain - ANKLE1 ENSG00000160117 UTR5 Human protein_coding chr19:17392471 chr19:17392471 . . 0 21 hPsi_associated_SNPs_103590 0 0 0 0 0 chromatin 0 0.43871669111702 0.893240690231324 0 hPsi_site_2550 iPseU_CNN:0.893240690231324;iRNA_PseU:0 2551 chr1 247752201 247752201 1 + C T SKCM 247752201 + 247752181 247752221 41 CATCGCCAAGTGGATCATTTCATCTGCGAGGTCCCTGTGCT CATCGCCAAGTGGATCATTTTATCTGCGAGGTCCCTGTGCT Direct Gain 0 0.963133696835962 0 0.999994874000549 prediction 0.926267393671923 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247752201 chr1:247752201 synonymous SNV . 0 21 hPsi_associated_SNPs_103591 0 0 0 0 0 unknown 0 0.439063793977995 0.999989748001098 0 hPsi_site_2551 iPseU_CNN:0.999989748001098;iRNA_PseU:0 2552 chr11 1271640 1271640 1 + G T BLCA 1271640 + 1271620 1271660 41 GCAACTGCCCTTCCAGCACTGAGAAGCACAGCCACCACACC GCAACTGCCCTTCCAGCACTTAGAAGCACAGCCACCACACC Direct Gain 0 0.963117724555323 0 0.999724745750427 prediction 0.926235449110645 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1271640 chr11:1271640 synonymous SNV . 0 21 hPsi_associated_SNPs_103592 0 0 0 0 0 Endoplasmic reticulum 0 0.438718495945688 0.999449491500854 0 hPsi_site_2552 iPseU_CNN:0.999449491500854;iRNA_PseU:0 2553 chr3 88040007 88040007 1 + G A OV 88040007 - 88039987 88040027 41 AGGGAGTTGATAGTTGTTGTCATCAGTGCCAGCCCAGACAG AGGGAGTTGATAGTTGTTGTTATCAGTGCCAGCCCAGACAG Direct Gain 0 0.963114619573803 0 0.26563224196434 prediction 0.926229239147605 Functional Gain - HTR1F ENSG00000179097 CDS Human protein_coding chr3:88040007 chr3:88040007 nonsynonymous SNV 0.978 1 21 hPsi_associated_SNPs_103593 0 0 0 0 0 exosome 0 0.438322568783089 0 0 hPsi_site_2553 iPseU_CNN:0;iRNA_PseU:0 2554 chr1 182440489 182440489 1 + G A UCEC 182440489 - 182440469 182440509 41 TGAGGTAGGAATAGAAGCGCCACATCCCTCTGACCCCGCCA TGAGGTAGGAATAGAAGCGCTACATCCCTCTGACCCCGCCA Direct Gain 0 0.963112981400367 0 0.995060443878174 prediction 0.926225962800735 Functional Gain - RGSL1 ENSG00000121446 CDS Human protein_coding chr1:182440489 chr1:182440489 stopgain 1.000 0 21 hPsi_associated_SNPs_103594 0 0 0 0 0 exosome 0 0.438776643986605 0.990120887756348 0 hPsi_site_2554 iPseU_CNN:0.990120887756348;iRNA_PseU:0 2555 chr1 9633411 9633411 1 + C A BLCA 9633411 - 9633391 9633431 41 GGATTCATTAAGGAATTTGTGATAAAAGCTGGAAAAAAAAA GGATTCATTAAGGAATTTGTTATAAAAGCTGGAAAAAAAAA Direct Gain 0 0.963105733329878 0 0.584820866584778 prediction 0.926211466659757 Functional Gain - SLC25A33 ENSG00000171612 CDS Human protein_coding chr1:9633411 chr1:9633411 synonymous SNV . 0 21 hPsi_associated_SNPs_103595 0 0 0 0 0 Ribosome 0 0.438717884213992 0.169641733169556 0 hPsi_site_2555 iPseU_CNN:0.169641733169556;iRNA_PseU:0 2556 chr1 16060330 16060330 1 + C A rs189025469 16060330 - 16060310 16060350 41 GCATCCTCGAATTTCTTCTTGTTGGAGGCTTCCTGGATCGC GCATCCTCGAATTTCTTCTTTTTGGAGGCTTCCTGGATCGC Direct Gain 0 0.963094502671784 0 0.492235869169235 prediction 0.926189005343569 Functional Gain - PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16060330 chr1:16060330 nonsynonymous SNV 0.977 0 21 hPsi_associated_SNPs_103596 0 0 0 0 0 chromatin 0 0.438719486592987 0 0 hPsi_site_2556 iPseU_CNN:0;iRNA_PseU:0 2557 chrX 9905275 9905275 1 + C T UCEC 9905275 + 9905255 9905295 41 GGAGAGCCGCCAGAGCCTGGCATGCCCCGCCGAGCCACCTG GGAGAGCCGCCAGAGCCTGGTATGCCCCGCCGAGCCACCTG Direct Gain 0 0.963081813574486 0 0.999770402908325 prediction 0.926163627148971 Functional Gain - SHROOM2 ENSG00000146950 CDS Human protein_coding chrX:9905275 chrX:9905275 nonsynonymous SNV 0.504 0 21 hPsi_associated_SNPs_103597 0 0 0 0 0 cytosol 0 0.438718601155831 0.99954080581665 0 hPsi_site_2557 iPseU_CNN:0.99954080581665;iRNA_PseU:0 2558 chr22 25042997 25042997 1 + C T rs574009726 25042997 + 25042977 25043017 41 AGGTCCAAGGTGCCCTACATCATGCGCCAGTGCGTGGAGGA AGGTCCAAGGTGCCCTACATTATGCGCCAGTGCGTGGAGGA Direct Gain 0 0.963078565489771 0 0.022452712059021 prediction 0.926157130979542 Functional Gain - BCRP3;POM121L10P ENSG00000215481;ENSG00000224124 ncRNA_exonic Human other chr22:25042997 chr22:25042997 . . 0 21 hPsi_associated_SNPs_103598 0 0 0 0 2 unknown 0 0.438723353859583 0 0 hPsi_site_2558 iPseU_CNN:0;iRNA_PseU:0 2559 chrX 113848299 113848299 1 + C A rs186489399 113848299 - 113848279 113848319 41 GTCAGTTGGCCTATGTTATAGATGCTCGCGGGTGTTAGCTG GTCAGTTGGCCTATGTTATATATGCTCGCGGGTGTTAGCTG Direct Gain 0 0.963068351049867 0 0.239023774862289 prediction 0.926136702099734 Functional Gain - HTR2C ENSG00000147246 UTR5 Human protein_coding chrX:113848299 chrX:113848299 . . 0 21 hPsi_associated_SNPs_103599 0 0 0 0 0 exosome 0 0.43895303121393 0 0 hPsi_site_2559 iPseU_CNN:0;iRNA_PseU:0 2560 chrX 47078252 47078252 1 + C T rs200711551 47078252 + 47078232 47078272 41 GGCGCCAACGAGTCCGGGGGCATCGCCCGCAGCGGCCAAGC GGCGCCAACGAGTCCGGGGGTATCGCCCGCAGCGGCCAAGC Direct Gain 0 0.963050678438658 0 0.993091106414795 prediction 0.926101356877317 Functional Gain - CDK16 ENSG00000102225 UTR5 Human protein_coding chrX:47078252 chrX:47078252 . . 0 21 hPsi_associated_SNPs_103600 0 0 1 0 0 Ribosome 0 0.438719228231274 0.98618221282959 0 hPsi_site_2560 iPseU_CNN:0.98618221282959;iRNA_PseU:0 2561 chr2 61412671 61412671 1 + G A rs372564878 61412671 - 61412651 61412691 41 GAAGAGCCACAGTGGGAATCCTTACACCCAGTGCCACTGGA GAAGAGCCACAGTGGGAATCTTTACACCCAGTGCCACTGGA Direct Gain 0 0.963030973196781 0 0.771529018878937 prediction 0.926061946393562 Functional Gain - AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61412671 chr2:61412671 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_103601 0 0 0 0 0 Nucleus 0 0.438718593897828 0.543058037757874 0 hPsi_site_2561 iPseU_CNN:0.543058037757874;iRNA_PseU:0 2562 chr9 4567684 4567684 1 + G A LUSC 4567684 - 4567664 4567704 41 GCTGGGAGGCTTCACTTCTTCACGCTTAGTTTTGTACTGCA GCTGGGAGGCTTCACTTCTTTACGCTTAGTTTTGTACTGCA Direct Gain 0 0.963030605909063 0 0.995227098464966 prediction 0.926061211818126 Functional Gain - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4567684 chr9:4567684 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_103602 0 0 0 0 0 chromatin 0 0.438724757937464 0.990454196929932 0 hPsi_site_2562 iPseU_CNN:0.990454196929932;iRNA_PseU:0 2563 chr3 127786858 127786858 1 + G A BLCA 127786858 - 127786838 127786878 41 GTCTCTCGGTGGCCTCTCATCACCATCTGCTGCTCCTTCAG GTCTCTCGGTGGCCTCTCATTACCATCTGCTGCTCCTTCAG Direct Gain 0 0.963013308662443 0 0.999983429908752 prediction 0.926026617324885 Functional Gain - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127786858 chr3:127786858 synonymous SNV . 0 21 hPsi_associated_SNPs_103603 0 0 0 0 0 Ribosome 0 0.438533526911536 0.999966859817504 0 hPsi_site_2563 iPseU_CNN:0.999966859817504;iRNA_PseU:0 2564 chr15 39875835 39875835 1 + G A SKCM 39875835 - 39875815 39875855 41 GTGGTTCCAAAGACAAACCTCACATTCTGCAGCACCCCCTG GTGGTTCCAAAGACAAACCTTACATTCTGCAGCACCCCCTG Direct Gain 0 0.963011289722775 0 0.999987006187439 prediction 0.92602257944555 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39875835 chr15:39875835 synonymous SNV . 0 21 hPsi_associated_SNPs_103604 0 0 0 0 0 cytosol 0 0.438722689164231 0.999974012374878 0 hPsi_site_2564 iPseU_CNN:0.999974012374878;iRNA_PseU:0 2565 chr12 57559950 57559950 1 + G A OV 57559950 - 57559930 57559970 41 ATCTTCACTGTTCCCACAGTCATTGTCCCCGTCGCAGAGCC ATCTTCACTGTTCCCACAGTTATTGTCCCCGTCGCAGAGCC Direct Gain 0 0.963008744421786 0 0.998223423957825 prediction 0.926017488843572 Functional Gain - LRP1 ENSG00000123384 CDS Human protein_coding chr12:57559950 chr12:57559950 nonsynonymous SNV 0.988 4 21 hPsi_associated_SNPs_103605 0 0 0 0 0 Exosome 0 0.438707267880937 0.99644684791565 0 hPsi_site_2565 iPseU_CNN:0.99644684791565;iRNA_PseU:0 2566 chr7 43447294 43447294 1 + C T SKCM 43447294 + 43447274 43447314 41 CAGGAGAGGAGATCCAAGATCATAGGCAACACCGTGAACCC CAGGAGAGGAGATCCAAGATTATAGGCAACACCGTGAACCC Direct Gain 0 0.963007477170192 0 0.996184468269348 prediction 0.926014954340385 Functional Gain - HECW1 ENSG00000002746 CDS Human protein_coding chr7:43447294 chr7:43447294 synonymous SNV . 0 21 hPsi_associated_SNPs_103606 0 0 0 0 1 Cytosol 0 0.438623503622499 0.992368936538696 0 hPsi_site_2566 iPseU_CNN:0.992368936538696;iRNA_PseU:0 2567 chr7 128480693 128480693 1 + G A LGG 128480693 - 128480673 128480713 41 TAGCCGCCCCACGTGATGGTCACCACATACTTCCCAGGCAC TAGCCGCCCCACGTGATGGTTACCACATACTTCCCAGGCAC Direct Gain 0 0.963004827181318 0 0.449234426021576 prediction 0.926009654362637 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128480693 chr7:128480693 synonymous SNV . 0 21 hPsi_associated_SNPs_103607 0 0 0 0 0 chromatin 0 0.438587511315976 0 0 hPsi_site_2567 iPseU_CNN:0;iRNA_PseU:0 2568 chr19 39914218 39914218 1 + G A UCEC 39914218 - 39914198 39914238 41 CCGAGGCCGGCGGCGCGGGGCATTGGCTGATGCCCGAGTCT CCGAGGCCGGCGGCGCGGGGTATTGGCTGATGCCCGAGTCT Direct Gain 0 0.963004595930174 0 0.914898097515106 prediction 0.926009191860347 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39914218 chr19:39914218 nonsynonymous SNV 0.102 4 21 hPsi_associated_SNPs_103608 0 0 0 0 0 Nucleus 0 0.438718673226402 0.829796195030212 0 hPsi_site_2568 iPseU_CNN:0.829796195030212;iRNA_PseU:0 2569 chr8 58192971 58192971 1 + G A rs73609764 58192971 - 58192951 58192991 41 GGACCCTCCAACTTCTCGGACAAGGACGTCTCCAACCTCTC GGACCCTCCAACTTCTCGGATAAGGACGTCTCCAACCTCTC Direct Gain 0 0.963001241416697 0 0.999707698822021 prediction 0.926002482833395 Functional Gain - LINC00588 ENSG00000215117 ncRNA_exonic Human lincRNA chr8:58192971 chr8:58192971 . . 0 21 hPsi_associated_SNPs_103609 0 0 0 0 0 unknown 0 0.438718592058145 0.999415397644042 0 hPsi_site_2569 iPseU_CNN:0.999415397644042;iRNA_PseU:0 2570 chr17 29702046 29702046 1 + A T rs3058624 29702046 + 29702026 29702066 41 GTAATTATATATATATATATATTTTTTCCCCTCCCCCTCTT GTAATTATATATATATATATTTTTTTTCCCCTCCCCCTCTT Direct Gain 0 0.962995373034649 0 0.0713426172733307 prediction 0.925990746069298 Functional Gain - NF1 ENSG00000196712 UTR3 Human protein_coding chr17:29702046 chr17:29702046 . . 0 21 hPsi_associated_SNPs_103610 4 0 1 0 0 Nucleus 0 0.438718592995107 0 0 hPsi_site_2570 iPseU_CNN:0;iRNA_PseU:0 2571 chr3 89498398 89498398 1 + G T LUAD 89498398 + 89498378 89498418 41 GGGAAGATCCCAATCAGGTGGACATCACCAGAAGCTATAGC GGGAAGATCCCAATCAGGTGTACATCACCAGAAGCTATAGC Direct Gain 0 0.962979974216649 0 0.99952507019043 prediction 0.925959948433298 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89498398 chr3:89498398 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103611 0 0 0 0 1 Ribosome 0 0.438621283754765 0.99905014038086 0 hPsi_site_2571 iPseU_CNN:0.99905014038086;iRNA_PseU:0 2572 chr1 155247639 155247639 1 + C A COAD 155247639 - 155247619 155247659 41 CGGAAGTCGCTGTAGGGGTGGATGATCCAGGCCCCCGCTGA CGGAAGTCGCTGTAGGGGTGTATGATCCAGGCCCCCGCTGA Direct Gain 0 0.962968569903494 0 0.711920022964478 prediction 0.925937139806989 Functional Gain - HCN3 ENSG00000143630 CDS Human protein_coding chr1:155247639 chr1:155247639 synonymous SNV . 0 21 hPsi_associated_SNPs_103612 0 0 0 0 0 chromatin 0 0.438718588504902 0.423840045928956 0 hPsi_site_2572 iPseU_CNN:0.423840045928956;iRNA_PseU:0 2573 chr1 112303122 112303122 1 + G A BLCA 112303122 - 112303102 112303142 41 ACTGCCTGGGTTCAAGTAGTCAAGTTCTATGAGTTGCTTAA ACTGCCTGGGTTCAAGTAGTTAAGTTCTATGAGTTGCTTAA Direct Gain 0 0.962951863802443 0 0.996408462524414 prediction 0.925903727604886 Functional Gain - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112303122 chr1:112303122 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103613 0 0 0 0 0 Ribosome 0 0.438718282658055 0.992816925048828 0 hPsi_site_2573 iPseU_CNN:0.992816925048828;iRNA_PseU:0 2574 chr15 31063899 31063899 1 + G T rs147469970 31063899 + 31063879 31063919 41 AGAGCTGAAGCCTTTATGGGGTCCAGGCCATCACCCCAGCA AGAGCTGAAGCCTTTATGGGTTCCAGGCCATCACCCCAGCA Direct Gain 0 0.962949275828949 0 0.999936699867249 prediction 0.925898551657898 Functional Gain - LOC100288637 ENSG00000187951;ENSG00000103832 intergenic Human other chr15:31063899 chr15:31063899 . . 0 21 hPsi_associated_SNPs_103614 0 0 0 0 0 unknown 0 0.43871859299454 0.999873399734498 0 hPsi_site_2574 iPseU_CNN:0.999873399734498;iRNA_PseU:0 2575 chr10 24813451 24813451 1 + C T SKCM 24813451 + 24813431 24813471 41 TGTCCGGCATGATGGTTCGCCACGCGCAGAGCTCCCCTGTG TGTCCGGCATGATGGTTCGCTACGCGCAGAGCTCCCCTGTG Direct Gain 0 0.962944675884453 0 1 prediction 0.925889351768907 Functional Gain - KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24813451 chr10:24813451 nonsynonymous SNV 0.021 3 21 hPsi_associated_SNPs_103615 0 0 0 0 0 Nucleus 0 0.438895296041452 1 0 hPsi_site_2575 iPseU_CNN:1;iRNA_PseU:0 2576 chr12 113496090 113496090 1 + G A GBM 113496090 - 113496070 113496110 41 CGCCAGCGGCTGTGCTCATTCAGCCACTCCCACACCACCAC CGCCAGCGGCTGTGCTCATTTAGCCACTCCCACACCACCAC Direct Gain 0 0.962943437921393 0 0.99932849407196 prediction 0.925886875842786 Functional Gain - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113496090 chr12:113496090 synonymous SNV . 0 21 hPsi_associated_SNPs_103616 0 0 0 0 0 Endoplasmic reticulum 0 0.438718391633644 0.99865698814392 0 hPsi_site_2576 iPseU_CNN:0.99865698814392;iRNA_PseU:0 2577 chr17 77711821 77711821 1 + G A LIHC 77711821 - 77711801 77711841 41 GCGACCTCAGACAGAAGAATCACGGTCCCCAGCAGTCCCAT GCGACCTCAGACAGAAGAATTACGGTCCCCAGCAGTCCCAT Direct Gain 0 0.962937384287104 0 0.96413642168045 prediction 0.925874768574208 Functional Gain - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77711821 chr17:77711821 synonymous SNV . 0 21 hPsi_associated_SNPs_103617 0 0 0 0 0 exosome 0 0.438714379498472 0.9282728433609 0 hPsi_site_2577 iPseU_CNN:0.9282728433609;iRNA_PseU:0 2578 chr13 113976673 113976673 1 + C T BLCA 113976673 + 113976653 113976693 41 GCCCTGGCGGGGCTGGTCCTCATCGTCCTCATCGCCTACCT GCCCTGGCGGGGCTGGTCCTTATCGTCCTCATCGCCTACCT Direct Gain 0 0.962904650467021 0 0.999862551689148 prediction 0.925809300934041 Functional Gain - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113976673 chr13:113976673 synonymous SNV . 0 21 hPsi_associated_SNPs_103618 0 0 1 0 1 Cytosol 0 0.438718618802265 0.999725103378296 0 hPsi_site_2578 iPseU_CNN:0.999725103378296;iRNA_PseU:0 2579 chr11 108547868 108547868 1 + C T BLCA 108547868 + 108547848 108547888 41 ACAGATGGGCTGGGGGTTCTCATAATATCACCTACGAGAGA ACAGATGGGCTGGGGGTTCTTATAATATCACCTACGAGAGA Direct Gain 0 0.962896380630298 0 0.846260845661163 prediction 0.925792761260596 Functional Gain - DDX10 ENSG00000178105 CDS Human protein_coding chr11:108547868 chr11:108547868 synonymous SNV . 0 21 hPsi_associated_SNPs_103619 0 0 1 0 1 Nucleus 0 0.43871859096138 0.692521691322326 0 hPsi_site_2579 iPseU_CNN:0.692521691322326;iRNA_PseU:0 2580 chr17 6941689 6941689 1 + C T LUSC 6941689 + 6941669 6941709 41 ACCTAGTGGCCTGTGGTGCTCTCCTCCGCCCACCCTCCCTG ACCTAGTGGCCTGTGGTGCTTTCCTCCGCCCACCCTCCCTG Direct Gain 0 0.962893124272397 0 0.997332334518433 prediction 0.925786248544794 Functional Gain - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6941689 chr17:6941689 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103620 0 0 1 0 0 chromatin 0 0.438716433598532 0.994664669036866 0 hPsi_site_2580 iPseU_CNN:0.994664669036866;iRNA_PseU:0 2581 chr2 101580599 101580599 1 + C T BLCA 101580599 + 101580579 101580619 41 CTAGGAAAGGAGGTTTGCTTCATTGCCACCGTTCGTCTGGC CTAGGAAAGGAGGTTTGCTTTATTGCCACCGTTCGTCTGGC Direct Gain 0 0.962889383665154 0 0.997340798377991 prediction 0.925778767330308 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101580599 chr2:101580599 synonymous SNV . 0 21 hPsi_associated_SNPs_103621 0 0 1 0 1 cytosol 0 0.438532727275952 0.994681596755982 0 hPsi_site_2581 iPseU_CNN:0.994681596755982;iRNA_PseU:0 2582 chr20 2413184 2413184 1 + C A COAD 2413184 - 2413164 2413204 41 GGGCCACTTTTGGAGGGGGTGATGTCAAACTGGACTGAGGC GGGCCACTTTTGGAGGGGGTTATGTCAAACTGGACTGAGGC Direct Gain 0 0.962874713886438 0 0.995350182056427 prediction 0.925749427772875 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2413184 chr20:2413184 synonymous SNV . 0 21 hPsi_associated_SNPs_103622 0 0 0 0 0 exosome 0 0.438713120337738 0.990700364112854 0 hPsi_site_2582 iPseU_CNN:0.990700364112854;iRNA_PseU:0 2583 chr10 14886908 14886908 1 + G A rs41284451 14886908 - 14886888 14886928 41 AAAAGGAAACGTTTCTAGGGCTTGCCCTGTATAACATACTA AAAAGGAAACGTTTCTAGGGTTTGCCCTGTATAACATACTA Direct Gain 0 0.962856136837844 0 0.101550310850143 prediction 0.925712273675689 Functional Gain - HSPA14 ENSG00000187522 intronic Human protein_coding chr10:14886908 chr10:14886908 . . 0 21 hPsi_associated_SNPs_103623 0 0 0 0 0 Cytosol 0 0.438718593012653 0 0 hPsi_site_2583 iPseU_CNN:0;iRNA_PseU:0 2584 chr10 18282139 18282139 1 + G A LIHC 18282139 - 18282119 18282159 41 GCAAGATGGTGGGAATGACCCACGTGCCCATTAACCAATGA GCAAGATGGTGGGAATGACCTACGTGCCCATTAACCAATGA Direct Gain 0 0.962853754401424 0 0.856432914733887 prediction 0.925707508802848 Functional Gain - SLC39A12 ENSG00000148482 CDS Human protein_coding chr10:18282139 chr10:18282139 synonymous SNV . 0 21 hPsi_associated_SNPs_103624 0 0 0 0 0 exosome 0 0.437169213724173 0.712865829467774 0 hPsi_site_2584 iPseU_CNN:0.712865829467774;iRNA_PseU:0 2585 chrX 37027324 37027324 1 + C A LUSC 37027324 - 37027304 37027344 41 GGGAGGCTCTGGGCAGAGATGAGACACTCCAGTCCCAGGAG GGGAGGCTCTGGGCAGAGATTAGACACTCCAGTCCCAGGAG Direct Gain 0 0.962842254384418 0 0.999213218688965 prediction 0.925684508768837 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37027324 chrX:37027324 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_103625 0 0 0 0 0 unknown 0 0.438718688409519 0.99842643737793 0 hPsi_site_2585 iPseU_CNN:0.99842643737793;iRNA_PseU:0 2586 chr6 43748497 43748497 1 + C T BLCA 43748497 + 43748477 43748517 41 TTCGAGGAAAGGGAAAGGGGCAAAAACGAAAGCGCAAGAAA TTCGAGGAAAGGGAAAGGGGTAAAAACGAAAGCGCAAGAAA Direct Gain 0 0.962842064460194 0 1 prediction 0.925684128920388 Functional Gain - VEGFA ENSG00000112715 CDS Human protein_coding chr6:43748497 chr6:43748497 stopgain 1.000 0 21 hPsi_associated_SNPs_103626 0 0 1 0 4 Nucleus 0 0.438718577719071 1 0 hPsi_site_2586 iPseU_CNN:1;iRNA_PseU:0 2587 chr4 79258880 79258880 1 + C A STAD 79258880 - 79258860 79258900 41 GAGATGTGAGGGTAACAGGAGATGCAGTCAGACTCCAACGG GAGATGTGAGGGTAACAGGATATGCAGTCAGACTCCAACGG Direct Gain 0 0.9628334651899 0 0.0514104068279266 prediction 0.925666930379801 Functional Gain - FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79258880 chr4:79258880 synonymous SNV . 0 21 hPsi_associated_SNPs_103627 0 0 0 0 0 Nucleus 0 0.438716208242082 0 0 hPsi_site_2587 iPseU_CNN:0;iRNA_PseU:0 2588 chr1 35580688 35580688 1 + C T KIRC 35580688 + 35580668 35580708 41 TTCAGCAAGTACTGAGAACTCATTTTCTACCCTGCCTCGTC TTCAGCAAGTACTGAGAACTTATTTTCTACCCTGCCTCGTC Direct Gain 0 0.962823363935167 0 0.999992609024048 prediction 0.925646727870333 Functional Gain - ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35580688 chr1:35580688 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_103628 0 0 1 0 0 Cytosol 0 0.438718550667773 0.999985218048096 0 hPsi_site_2588 iPseU_CNN:0.999985218048096;iRNA_PseU:0 2589 chr16 75611225 75611225 1 + C T rs150185855 75611225 + 75611205 75611245 41 GAAAAAGATGAAGATGGATTCTTATATGTGGCCTACAGCGG GAAAAAGATGAAGATGGATTTTTATATGTGGCCTACAGCGG Direct Gain 0 0.962806304195979 0 0.753280460834503 prediction 0.925612608391958 Functional Gain - GABARAPL2 ENSG00000034713 CDS Human protein_coding chr16:75611225 chr16:75611225 synonymous SNV . 0 21 hPsi_associated_SNPs_103629 0 0 1 0 1 Ribosome 0 0.438718606635592 0.506560921669006 0 hPsi_site_2589 iPseU_CNN:0.506560921669006;iRNA_PseU:0 2590 chr3 97851685 97851685 1 + C A UCEC 97851685 - 97851665 97851705 41 AGGTGAGGGTCTTTCCAGATGACAGCAATCAGACCAAGATT AGGTGAGGGTCTTTCCAGATTACAGCAATCAGACCAAGATT Direct Gain 0 0.962800680435922 0 0.0542624890804291 prediction 0.925601360871844 Functional Gain - OR5H1 ENSG00000231192 CDS Human protein_coding chr3:97851685 chr3:97851685 synonymous SNV . 0 21 hPsi_associated_SNPs_103630 0 0 0 0 0 unknown 0 0.438718232115006 0 0 hPsi_site_2590 iPseU_CNN:0;iRNA_PseU:0 2591 chr9 990423 990423 1 + G A LUSC 990423 - 990403 990443 41 AGAAGGACTTCCACGGCGCTCACCAGGTCCCCGCCACAGCC AGAAGGACTTCCACGGCGCTTACCAGGTCCCCGCCACAGCC Direct Gain 0 0.962797311331291 0 0.994827747344971 prediction 0.925594622662582 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990423 chr9:990423 synonymous SNV . 0 21 hPsi_associated_SNPs_103631 0 0 0 0 0 unknown 0 0.438718266263056 0.989655494689942 0 hPsi_site_2591 iPseU_CNN:0.989655494689942;iRNA_PseU:0 2592 chr4 85566464 85566464 1 + C A LIHC 85566464 - 85566444 85566484 41 AAGTACCTTATAAAACTTGTGATGTACACATGTACAAAAGT AAGTACCTTATAAAACTTGTTATGTACACATGTACAAAAGT Direct Gain 0 0.962795374394366 0 0.713222742080688 prediction 0.925590748788731 Functional Gain - CDS1 ENSG00000163624 CDS Human protein_coding chr4:85566464 chr4:85566464 synonymous SNV . 0 21 hPsi_associated_SNPs_103632 0 0 0 0 0 Endoplasmic reticulum 0 0.436408180701858 0.426445484161376 0 hPsi_site_2592 iPseU_CNN:0.426445484161376;iRNA_PseU:0 2593 chrX 103811142 103811142 1 + C T rs761614384 103811142 + 103811122 103811162 41 AGGTGGACAGGCAGAGTCTGCACCTGCCGCCTGCACCTCCG AGGTGGACAGGCAGAGTCTGTACCTGCCGCCTGCACCTCCG Direct Gain 0 0.962779909052499 0 0.999146342277527 prediction 0.925559818104997 Functional Gain - IL1RAPL2 ENSG00000189108 UTR5 Human protein_coding chrX:103811142 chrX:103811142 . . 0 21 hPsi_associated_SNPs_103633 0 0 0 0 0 exosome 0 0.438139686011251 0.998292684555054 0 hPsi_site_2593 iPseU_CNN:0.998292684555054;iRNA_PseU:0 2594 chr17 30348350 30348350 1 + C T rs145413249 30348350 + 30348330 30348370 41 CCCATGGGAATCTCCCCATGCACCTGCTCCCCCAGCAGCCC CCCATGGGAATCTCCCCATGTACCTGCTCCCCCAGCAGCCC Direct Gain 0 0.962779539647227 0 0.999978363513947 prediction 0.925559079294454 Functional Gain - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30348350 chr17:30348350 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_103634 0 0 0 0 0 chromatin 0 0.438719345608975 0.999956727027894 0 hPsi_site_2594 iPseU_CNN:0.999956727027894;iRNA_PseU:0 2595 chr19 41928202 41928202 1 + C T BLCA 41928202 + 41928182 41928222 41 GCCACACTTGAGTGCCCCATCATCTTCTTCTGCCGGAACAA GCCACACTTGAGTGCCCCATTATCTTCTTCTGCCGGAACAA Direct Gain 0 0.962777038378957 0 0.797756433486938 prediction 0.925554076757914 Functional Gain - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41928202 chr19:41928202 synonymous SNV . 0 21 hPsi_associated_SNPs_103635 0 0 1 0 1 Cytosol 0 0.438667897980399 0.595512866973876 0 hPsi_site_2595 iPseU_CNN:0.595512866973876;iRNA_PseU:0 2596 chr11 67658374 67658374 1 + G A rs380394 67658374 - 67658354 67658394 41 GGGTACTGGTCACTCTTGCTCTCTTTCTCCTGCTCAAAATT GGGTACTGGTCACTCTTGCTTTCTTTCTCCTGCTCAAAATT Direct Gain 0 0.962775283267561 0 0.125075489282608 prediction 0.925550566535122 Functional Gain - FAM86C2P;UNC93B1 ENSG00000251637 ncRNA_exonic Human lincRNA chr11:67658374 chr11:67658374 . . 0 21 hPsi_associated_SNPs_103636 0 0 0 0 0 unknown 0 0.438717394832041 0 0 hPsi_site_2596 iPseU_CNN:0;iRNA_PseU:0 2597 chr12 129360514 129360514 1 + G T LUAD 129360514 + 129360494 129360534 41 TGAAGGATGCCTTTGACTTTGAAAGCCGATCTGAGATTGCA TGAAGGATGCCTTTGACTTTTAAAGCCGATCTGAGATTGCA Direct Gain 0 0.962762536206162 0 0.998645901679993 prediction 0.925525072412325 Functional Gain - GLT1D1 ENSG00000151948 CDS Human protein_coding chr12:129360514 chr12:129360514 stopgain 0.584 1 21 hPsi_associated_SNPs_103637 0 0 0 1 2 Cytosol 0 0.438718593011498 0.997291803359986 0 hPsi_site_2597 iPseU_CNN:0.997291803359986;iRNA_PseU:0 2598 chr7 99704122 99704122 1 + C T SKCM 99704122 + 99704102 99704142 41 GTGCAAGGAGGCTCTCAACTCTCAGGCCTTTTCCAGGTATT GTGCAAGGAGGCTCTCAACTTTCAGGCCTTTTCCAGGTATT Direct Gain 0 0.962755369062728 0 0.999492883682251 prediction 0.925510738125456 Functional Gain - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99704122 chr7:99704122 synonymous SNV . 0 21 hPsi_associated_SNPs_103638 0 0 0 0 2 Cytosol 0 0.438718498425538 0.998985767364502 0 hPsi_site_2598 iPseU_CNN:0.998985767364502;iRNA_PseU:0 2599 chr19 15806872 15806872 1 + C A rs117812386 15806872 - 15806852 15806892 41 AGGCTGTGGGCACCTTTGGGGATGACTCGGCCATCTGGGAG AGGCTGTGGGCACCTTTGGGTATGACTCGGCCATCTGGGAG Direct Gain 0 0.962752334037906 0 0.737845420837402 prediction 0.925504668075811 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15806872 chr19:15806872 synonymous SNV . 0 21 hPsi_associated_SNPs_103639 0 0 0 0 0 exosome 0 0.438719577293423 0.475690841674804 0 hPsi_site_2599 iPseU_CNN:0.475690841674804;iRNA_PseU:0 2600 chr9 139747579 139747579 1 + C A COAD 139747579 - 139747559 139747599 41 GGGCTCCTGCAGTGGTTGGGGACCCAGGCCCAGCCTGAGGA GGGCTCCTGCAGTGGTTGGGTACCCAGGCCCAGCCTGAGGA Direct Gain 0 0.962733038615839 0 0.995114624500275 prediction 0.925466077231677 Functional Gain - MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139747579 chr9:139747579 synonymous SNV . 0 21 hPsi_associated_SNPs_103640 0 0 0 0 0 chromatin 0 0.438741156806659 0.99022924900055 0 hPsi_site_2600 iPseU_CNN:0.99022924900055;iRNA_PseU:0 2601 chr2 36764577 36764577 1 + C T UCEC 36764577 + 36764557 36764597 41 CGGTGGGACCTTGACAGCTGCACCCACTGCTACTGCCTGCA CGGTGGGACCTTGACAGCTGTACCCACTGCTACTGCCTGCA Direct Gain 0 0.962725653365073 0 0.998593688011169 prediction 0.925451306730147 Functional Gain - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36764577 chr2:36764577 synonymous SNV . 0 21 hPsi_associated_SNPs_103641 0 0 1 0 1 Nucleus 0 0.439058170189415 0.997187376022338 0 hPsi_site_2601 iPseU_CNN:0.997187376022338;iRNA_PseU:0 2602 chr9 18675883 18675883 1 + G A LUSC 18675883 - 18675863 18675903 41 AGGAAGGGGATGGTAGAGGTCATAAGGCATGATCTGCTTGT AGGAAGGGGATGGTAGAGGTTATAAGGCATGATCTGCTTGT Direct Gain 0 0.962725637408277 0 0.95010769367218 prediction 0.925451274816554 Functional Gain - ADAMTSL1 ENSG00000178031 CDS Human protein_coding chr9:18675883 chr9:18675883 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103642 0 0 0 0 0 Nucleus 0 0.43871291825427 0.90021538734436 0 hPsi_site_2602 iPseU_CNN:0.90021538734436;iRNA_PseU:0 2603 chr19 17448913 17448913 1 + G T rs201061021 17448913 + 17448893 17448933 41 GGCCGCTGCGGCATCGCAGTGATCCGGACCAGCGGCCCCGC GGCCGCTGCGGCATCGCAGTTATCCGGACCAGCGGCCCCGC Direct Gain 0 0.962716169506623 0 0.973508238792419 prediction 0.925432339013247 Functional Gain - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17448913 chr19:17448913 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_103643 0 0 1 0 1 Ribosome 0 0.438711948346853 0.947016477584838 0 hPsi_site_2603 iPseU_CNN:0.947016477584838;iRNA_PseU:0 2604 chr9 78641900 78641900 1 + G A SKCM 78641900 - 78641880 78641920 41 GGGTCCAAGTCATTCCCATTCACGTCGCAACTTGCCAGAGC GGGTCCAAGTCATTCCCATTTACGTCGCAACTTGCCAGAGC Direct Gain 0 0.962714988753486 0 0.999816417694092 prediction 0.925429977506973 Functional Gain - PCSK5 ENSG00000099139 CDS Human protein_coding chr9:78641900 chr9:78641900 synonymous SNV . 0 21 hPsi_associated_SNPs_103644 0 0 0 0 0 exosome 0 0.445265980154366 0.999632835388184 0 hPsi_site_2604 iPseU_CNN:0.999632835388184;iRNA_PseU:0 2605 chr17 37077261 37077261 1 + C T rs147954768 37077261 + 37077241 37077281 41 CCCAGATAAGGCAAGCCAGTCATGGAATCTTGCTGCAGGCC CCCAGATAAGGCAAGCCAGTTATGGAATCTTGCTGCAGGCC Direct Gain 0 0.9627109795317 0 0.997921705245972 prediction 0.925421959063401 Functional Gain - LASP1 ENSG00000265784 ncRNA_intronic Human antisense chr17:37077261 chr17:37077261 . . 0 21 hPsi_associated_SNPs_103645 0 0 1 0 0 Cytosol 0 0.43871859315047 0.995843410491944 0 hPsi_site_2605 iPseU_CNN:0.995843410491944;iRNA_PseU:0 2606 chrX 114874780 114874780 1 + G A BLCA 114874780 - 114874760 114874800 41 GTTAATATCTATCCGTGGTTCACCTTCCTTTTGTCCTTTTG GTTAATATCTATCCGTGGTTTACCTTCCTTTTGTCCTTTTG Direct Gain 0 0.962697322838835 0 0.542513966560364 prediction 0.925394645677669 Functional Gain - PLS3 ENSG00000102024 CDS Human protein_coding chrX:114874780 chrX:114874780 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103646 0 0 0 0 0 Nucleus 0 0.438718079979976 0.085027933120728 0 hPsi_site_2606 iPseU_CNN:0.085027933120728;iRNA_PseU:0 2607 chr17 76193556 76193556 1 + C T rs185477221 76193556 + 76193536 76193576 41 GCAGGTCTGCAGCCCTGGGGCTTATCAGACACCAACCCTGC GCAGGTCTGCAGCCCTGGGGTTTATCAGACACCAACCCTGC Direct Gain 0 0.962686700867297 0 0.9382084608078 prediction 0.925373401734593 Functional Gain - AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76193556 chr17:76193556 . . 0 21 hPsi_associated_SNPs_103647 0 0 1 0 0 Nucleus 0 0.438718389458292 0.8764169216156 0 hPsi_site_2607 iPseU_CNN:0.8764169216156;iRNA_PseU:0 2608 chr1 110210740 110210740 1 + G A rs201905887 110210740 - 110210720 110210760 41 CAGTACCCCAGTGTCATGGGCATGGTGCTGGTTGCTGTGGA CAGTACCCCAGTGTCATGGGTATGGTGCTGGTTGCTGTGGA Direct Gain 0 0.962683672324233 0 0.999140024185181 prediction 0.925367344648466 Functional Gain - GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110210740 chr1:110210740 nonsynonymous SNV 0.035 2 21 hPsi_associated_SNPs_103648 0 0 0 0 0 Cytosol 0 0.439112590846332 0.998280048370362 0 hPsi_site_2608 iPseU_CNN:0.998280048370362;iRNA_PseU:0 2609 chr1 67423853 67423853 1 + G A CESC 67423853 - 67423833 67423873 41 ATCATTATCAGCATCTTCATCATCTTCACCTTCTTCTTCCT ATCATTATCAGCATCTTCATTATCTTCACCTTCTTCTTCCT Direct Gain 0 0.962678308706695 0 0.999947965145111 prediction 0.925356617413391 Functional Gain - MIER1 ENSG00000198160 CDS Human protein_coding chr1:67423853 chr1:67423853 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_103649 0 0 0 0 0 Ribosome 0 0.438719017683305 0.999895930290222 0 hPsi_site_2609 iPseU_CNN:0.999895930290222;iRNA_PseU:0 2610 chr10 96018620 96018620 1 + C T LUSC 96018620 + 96018600 96018640 41 ATGAAGGGATTTCAGAGCTTCATGGTTTCAGATAGCAACAT ATGAAGGGATTTCAGAGCTTTATGGTTTCAGATAGCAACAT Direct Gain 0 0.962664753039394 0 0.376239240169525 prediction 0.925329506078789 Functional Gain - PLCE1 ENSG00000138193 CDS Human protein_coding chr10:96018620 chr10:96018620 synonymous SNV . 0 21 hPsi_associated_SNPs_103650 0 0 0 0 2 nucleoplasm 0 0.438719212659474 0 0 hPsi_site_2610 iPseU_CNN:0;iRNA_PseU:0 2611 chr18 56348550 56348550 1 + C T LUAD 56348550 + 56348530 56348570 41 TGGAACACACTGAAGTTCTTCAGCTTCTCAGCCCCCCAGGT TGGAACACACTGAAGTTCTTTAGCTTCTCAGCCCCCCAGGT Direct Gain 0 0.962662258326765 0 0.999986052513123 prediction 0.92532451665353 Functional Gain - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56348550 chr18:56348550 stopgain 0.999 0 21 hPsi_associated_SNPs_103651 0 0 1 0 1 Nucleus 0 0.438720842272176 0.999972105026246 0 hPsi_site_2611 iPseU_CNN:0.999972105026246;iRNA_PseU:0 2612 chr20 48807401 48807401 1 + G A rs543437865 48807401 - 48807381 48807421 41 GGCTGGACCCTCGGGTGGGTCCCCTTCCCAGTCCCGTGCGC GGCTGGACCCTCGGGTGGGTTCCCTTCCCAGTCCCGTGCGC Direct Gain 0 0.962659296877737 0 0.99987006187439 prediction 0.925318593755474 Functional Gain - CEBPB-AS1 ENSG00000172216 UTR5 Human protein_coding chr20:48807401 chr20:48807401 . . 0 21 hPsi_associated_SNPs_103652 0 0 0 0 0 unknown 0 0.438629906340788 0.99974012374878 0 hPsi_site_2612 iPseU_CNN:0.99974012374878;iRNA_PseU:0 2613 chr10 46274545 46274545 1 + C A UCEC 46274545 - 46274525 46274565 41 TGGAGCCTGGATAATGTTTTGATCTTCCATTTTATCCTCTT TGGAGCCTGGATAATGTTTTTATCTTCCATTTTATCCTCTT Direct Gain 0 0.962644217771397 0 0.352011620998383 prediction 0.925288435542794 Functional Gain - WASHC2C ENSG00000172661 CDS Human protein_coding chr10:46274545 chr10:46274545 nonsynonymous SNV 0.421 0 21 hPsi_associated_SNPs_103653 0 0 0 0 0 unknown 0 0.438718284497723 0 0 hPsi_site_2613 iPseU_CNN:0;iRNA_PseU:0 2614 chr17 36623161 36623161 1 + G A UCEC 36623161 - 36623141 36623181 41 GTAGCCGATGTACCCGAGGTCATCCAGGCCCTGCAGGCCAG GTAGCCGATGTACCCGAGGTTATCCAGGCCCTGCAGGCCAG Direct Gain 0 0.962633084011251 0 0.792435526847839 prediction 0.925266168022503 Functional Gain - ARHGAP23 ENSG00000225485 CDS Human other chr17:36623161 chr17:36623161 nonsynonymous SNV 0.410 3 21 hPsi_associated_SNPs_103654 0 0 0 0 0 nucleus 0 0.438718592995102 0.584871053695678 0 hPsi_site_2614 iPseU_CNN:0.584871053695678;iRNA_PseU:0 2615 chr19 37733854 37733854 1 + C T SKCM 37733854 + 37733834 37733874 41 AAAGGCCTTCAGTTGTAGCTCATACCTTTCTCAACATCAGA AAAGGCCTTCAGTTGTAGCTTATACCTTTCTCAACATCAGA Direct Gain 0 0.96262882635486 0 0.00155812501907349 prediction 0.92525765270972 Functional Gain - ZNF383 ENSG00000188283 CDS Human protein_coding chr19:37733854 chr19:37733854 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103655 0 0 1 0 0 cytosol 0 0.438718149626264 0 0 hPsi_site_2615 iPseU_CNN:0;iRNA_PseU:0 2616 chr17 6545107 6545107 1 + T A COAD 6545107 - 6545087 6545127 41 ATGAACACACATCCTTCACTAATGTGCTTCAGCCCCTCTCG ATGAACACACATCCTTCACTTATGTGCTTCAGCCCCTCTCG Direct Gain 0 0.962626294051232 0 0.993563175201416 prediction 0.925252588102465 Functional Gain - TXNDC17 ENSG00000129235 CDS Human protein_coding chr17:6545107 chr17:6545107 synonymous SNV . 0 21 hPsi_associated_SNPs_103656 0 0 0 0 0 Ribosome 0 0.438708437308507 0.987126350402832 0 hPsi_site_2616 iPseU_CNN:0.987126350402832;iRNA_PseU:0 2617 chr20 19664914 19664914 1 + C T SKCM 19664914 + 19664894 19664934 41 TCTGAGGCTGGCCTTCGAATCATGATAACCAGCCACTTTCC TCTGAGGCTGGCCTTCGAATTATGATAACCAGCCACTTTCC Direct Gain 0 0.962597187565004 0 0.996845364570618 prediction 0.925194375130008 Functional Gain - SLC24A3 ENSG00000185052 CDS Human protein_coding chr20:19664914 chr20:19664914 synonymous SNV . 0 21 hPsi_associated_SNPs_103657 0 0 0 0 2 exosome 0 0.438744884031192 0.993690729141236 0 hPsi_site_2617 iPseU_CNN:0.993690729141236;iRNA_PseU:0 2618 chr6 159650965 159650965 1 + C T SKCM 159650965 + 159650945 159650985 41 CCTGGGGAACGCTATCTTTTCAAAATCCGGGCCACAAACAG CCTGGGGAACGCTATCTTTTTAAAATCCGGGCCACAAACAG Direct Gain 0 0.962564185075404 0 0.99998939037323 prediction 0.925128370150807 Functional Gain - FNDC1 ENSG00000164694 CDS Human protein_coding chr6:159650965 chr6:159650965 synonymous SNV . 0 21 hPsi_associated_SNPs_103658 0 0 0 0 1 Endoplasmic reticulum 0 0.438718593014541 0.99997878074646 0 hPsi_site_2618 iPseU_CNN:0.99997878074646;iRNA_PseU:0 2619 chrX 135106627 135106627 1 + C T HNSC 135106627 + 135106607 135106647 41 TGGCACCACTGCAATGCTGTCATGCTTGCATATCAGGTAAG TGGCACCACTGCAATGCTGTTATGCTTGCATATCAGGTAAG Direct Gain 0 0.962562883834679 0 0.997416615486145 prediction 0.925125767669358 Functional Gain - SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106627 chrX:135106627 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_103659 0 0 1 0 1 Endoplasmic reticulum 0 0.433688520044501 0.99483323097229 0 hPsi_site_2619 iPseU_CNN:0.99483323097229;iRNA_PseU:0 2620 chr19 17692130 17692130 1 + C T ESCA 17692130 + 17692110 17692150 41 GTATGGAACAATGAGCACGTCAAGACCGACTGGGACCGCGC GTATGGAACAATGAGCACGTTAAGACCGACTGGGACCGCGC Direct Gain 0 0.962559832211128 0 0.973758459091187 prediction 0.925119664422255 Functional Gain - COLGALT1 ENSG00000130309 CDS Human protein_coding chr19:17692130 chr19:17692130 synonymous SNV . 0 21 hPsi_associated_SNPs_103660 0 0 1 0 0 Ribosome 0 0.43878755575003 0.947516918182374 0 hPsi_site_2620 iPseU_CNN:0.947516918182374;iRNA_PseU:0 2621 chr11 64853913 64853913 1 + G A HNSC 64853913 - 64853893 64853933 41 GGGTAGCTGGGCAGCACGTTCATTGAGGCAGGCCCAGTGAA GGGTAGCTGGGCAGCACGTTTATTGAGGCAGGCCCAGTGAA Direct Gain 0 0.962556085307696 0 0.914064407348633 prediction 0.925112170615392 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64853913 chr11:64853913 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103661 0 0 0 0 0 Ribosome 0 0.438718649336773 0.828128814697266 0 hPsi_site_2621 iPseU_CNN:0.828128814697266;iRNA_PseU:0 2622 chr3 172480549 172480549 1 + G T UCEC 172480549 + 172480529 172480569 41 TTGAAGAGAATATAGTAAAAGATCTTCCCTTTGAACCTTCA TTGAAGAGAATATAGTAAAATATCTTCCCTTTGAACCTTCA Direct Gain 0 0.96255297047011 0 0.0617927610874176 prediction 0.92510594094022 Functional Gain - ECT2 ENSG00000114346 CDS Human protein_coding chr3:172480549 chr3:172480549 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_103662 0 0 1 0 1 Nucleus 0 0.43871870317523 0 0 hPsi_site_2622 iPseU_CNN:0;iRNA_PseU:0 2623 chr6 148865075 148865075 1 + G A GBM 148865075 - 148865055 148865095 41 GTCTGGGGGCCCTCCAGGGTCTCACAGCTCCGGCAGATGGA GTCTGGGGGCCCTCCAGGGTTTCACAGCTCCGGCAGATGGA Direct Gain 0 0.962540058264606 0 0.995221257209778 prediction 0.925080116529212 Functional Gain - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148865075 chr6:148865075 synonymous SNV . 0 21 hPsi_associated_SNPs_103663 0 0 0 0 0 Cytosol 0 0.438718568428924 0.990442514419556 0 hPsi_site_2623 iPseU_CNN:0.990442514419556;iRNA_PseU:0 2624 chr11 68696791 68696791 1 + C T BLCA 68696791 + 68696771 68696811 41 AGTGCATCCTGGCGGGCGATCACAAGCAGCTGCCCCCCACC AGTGCATCCTGGCGGGCGATTACAAGCAGCTGCCCCCCACC Direct Gain 0 0.962534747261202 0 0.999971866607666 prediction 0.925069494522403 Functional Gain - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68696791 chr11:68696791 nonsynonymous SNV 0.537 2 21 hPsi_associated_SNPs_103664 0 0 1 2 1 chromatin 0 0.438718592995357 0.999943733215332 0 hPsi_site_2624 iPseU_CNN:0.999943733215332;iRNA_PseU:0 2625 chr8 32505728 32505728 1 + C A UCEC 32505728 - 32505708 32505748 41 GCCGCTGATGGTTCAAAGGAGACAACAGCCTTGTCACCTTG GCCGCTGATGGTTCAAAGGATACAACAGCCTTGTCACCTTG Direct Gain 0 0.962522378117421 0 0.999441921710968 prediction 0.925044756234842 Functional Gain - NRG1 ENSG00000157168 CDS Human protein_coding chr8:32505728 chr8:32505728 synonymous SNV . 0 21 hPsi_associated_SNPs_103665 0 0 0 0 0 Endoplasmic reticulum 0 0.439085435522406 0.998883843421936 0 hPsi_site_2625 iPseU_CNN:0.998883843421936;iRNA_PseU:0 2626 chr1 229772088 229772088 1 + G A rs150767483 229772088 - 229772068 229772108 41 AGGGGCTGCACGAGCTCCCTCATCATCCTCTCCATCATGCA AGGGGCTGCACGAGCTCCCTTATCATCCTCTCCATCATGCA Direct Gain 0 0.962517414175166 0 0.370256841182709 prediction 0.925034828350332 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772088 chr1:229772088 nonsynonymous SNV 0.788 0 21 hPsi_associated_SNPs_103666 0 0 0 0 0 Nucleus 0 0.438718627566132 0 0 hPsi_site_2626 iPseU_CNN:0;iRNA_PseU:0 2627 chr6 29430152 29430152 1 + C T UCEC 29430152 + 29430132 29430172 41 CAGTTGGCTGTGTCCAGTGTCATCTTCGTGGTTGTGCCTCT CAGTTGGCTGTGTCCAGTGTTATCTTCGTGGTTGTGCCTCT Direct Gain 0 0.962497024815805 0 0.999899744987488 prediction 0.92499404963161 Functional Gain - OR2H1 ENSG00000204688 CDS Human protein_coding chr6:29430152 chr6:29430152 synonymous SNV . 0 21 hPsi_associated_SNPs_103667 0 0 0 0 0 unknown 0 0.411855782008837 0.999799489974976 0 hPsi_site_2627 iPseU_CNN:0.999799489974976;iRNA_PseU:0 2628 chr10 134942688 134942688 1 + C T ACC 134942688 + 134942668 134942708 41 GGCAGCCCCCGCAGCTCGCGCACAGACAGCCCCCCCAGCTC GGCAGCCCCCGCAGCTCGCGTACAGACAGCCCCCCCAGCTC Direct Gain 0 0.962493837535844 0 0.984125018119812 prediction 0.924987675071688 Functional Gain - ADGRA1 ENSG00000197177 CDS Human protein_coding chr10:134942688 chr10:134942688 synonymous SNV . 0 21 hPsi_associated_SNPs_103668 0 0 0 0 0 Nucleus 0 0.438717018189789 0.968250036239624 0 hPsi_site_2628 iPseU_CNN:0.968250036239624;iRNA_PseU:0 2629 chr22 24890945 24890945 1 + G T rs2232857 24890945 + 24890925 24890965 41 CCTGAGGGAGGCGGGAGGGGGACAGCCTCAGTCCTGACTCG CCTGAGGGAGGCGGGAGGGGTACAGCCTCAGTCCTGACTCG Direct Gain 0 0.962481556633102 0 0.999998092651367 prediction 0.924963113266204 Functional Gain - ADORA2A-AS1 ENSG00000178803 ncRNA_exonic Human antisense chr22:24890945 chr22:24890945 . . 0 21 hPsi_associated_SNPs_103669 0 0 0 0 0 unknown 0 0.438718633599362 0.999996185302734 0 hPsi_site_2629 iPseU_CNN:0.999996185302734;iRNA_PseU:0 2630 chr1 167097335 167097335 1 + C A LUSC 167097335 - 167097315 167097355 41 GCCTCGTGGTAGGAGGAGGTGTCCTGTTCCTCTGACTGGGA GCCTCGTGGTAGGAGGAGGTTTCCTGTTCCTCTGACTGGGA Direct Gain 0 0.962473517369578 0 0.149611920118332 prediction 0.924947034739155 Functional Gain - DUSP27 ENSG00000198842 CDS Human protein_coding chr1:167097335 chr1:167097335 nonsynonymous SNV 0.965 2 21 hPsi_associated_SNPs_103670 0 0 0 0 0 Endoplasmic reticulum 0 0.438718766494569 0 0 hPsi_site_2630 iPseU_CNN:0;iRNA_PseU:0 2631 chr19 41950049 41950049 1 + G A rs139707196 41950049 - 41950029 41950069 41 CTCCTGCTTCCTCTGGGGCTCTTGATCCTCCTCCTCTTCCT CTCCTGCTTCCTCTGGGGCTTTTGATCCTCCTCCTCTTCCT Direct Gain 0 0.9624632468308 0 0.999942064285278 prediction 0.924926493661599 Functional Gain - ERICH4 ENSG00000204978 CDS Human protein_coding chr19:41950049 chr19:41950049 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_103671 0 0 0 0 0 exosome 0 0.438718592995102 0.999884128570556 0 hPsi_site_2631 iPseU_CNN:0.999884128570556;iRNA_PseU:0 2632 chr6 44116057 44116057 1 + G A UCEC 44116057 - 44116037 44116077 41 AGAGGCTTCTCATTCACCTTCTCCTTCTCCCGCTTGTAGTC AGAGGCTTCTCATTCACCTTTTCCTTCTCCCGCTTGTAGTC Direct Gain 0 0.96245931500509 0 0.90585720539093 prediction 0.92491863001018 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116057 chr6:44116057 synonymous SNV . 0 21 hPsi_associated_SNPs_103672 0 0 0 0 0 Ribosome 0 0.438718592995104 0.81171441078186 0 hPsi_site_2632 iPseU_CNN:0.81171441078186;iRNA_PseU:0 2633 chr19 30097231 30097231 1 + G A rs150671362 30097231 - 30097211 30097251 41 ACTTCGCGGCCCCGCTTACTCTTCATTCTCGGACCGCTTCC ACTTCGCGGCCCCGCTTACTTTTCATTCTCGGACCGCTTCC Direct Gain 0 0.962458000779109 0 0.949594020843506 prediction 0.924916001558219 Functional Gain - POP4 ENSG00000105171 CDS Human protein_coding chr19:30097231 chr19:30097231 synonymous SNV . 0 21 hPsi_associated_SNPs_103673 0 0 0 0 0 Ribosome 0 0.438718592939512 0.899188041687012 0 hPsi_site_2633 iPseU_CNN:0.899188041687012;iRNA_PseU:0 2634 chr19 49842154 49842154 1 + C T COAD 49842154 + 49842134 49842174 41 CGGTCCAGACACAGTGCAGACATCTGCGCTGTCCCTGCAGA CGGTCCAGACACAGTGCAGATATCTGCGCTGTCCCTGCAGA Direct Gain 0 0.962447561082146 0 0.968997061252594 prediction 0.924895122164292 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49842154 chr19:49842154 synonymous SNV . 0 21 hPsi_associated_SNPs_103674 0 0 1 0 1 Endoplasmic reticulum 0 0.432606116830731 0.937994122505188 0 hPsi_site_2634 iPseU_CNN:0.937994122505188;iRNA_PseU:0 2635 chr15 93139725 93139725 1 + G T rs78716616 93139725 + 93139705 93139745 41 ACATCGAGGGGTGCCCCTGTGTTGCCACTTTCTGGGATGTG ACATCGAGGGGTGCCCCTGTTTTGCCACTTTCTGGGATGTG Direct Gain 0 0.962441608802567 0 0.221840411424637 prediction 0.924883217605134 Functional Gain - LINC00930;FAM174B ENSG00000258676 ncRNA_intronic Human processed_transcript chr15:93139725 chr15:93139725 . . 0 21 hPsi_associated_SNPs_103675 0 0 0 0 0 unknown 0 0.438358951093741 0 0 hPsi_site_2635 iPseU_CNN:0;iRNA_PseU:0 2636 chr18 61621780 61621780 1 + G A SKCM 61621780 - 61621760 61621800 41 ATGACTTACTGTGAGGAAATCATAAGACTTTTCTCCAAAGA ATGACTTACTGTGAGGAAATTATAAGACTTTTCTCCAAAGA Direct Gain 0 0.962429104474638 0 0.996528506278992 prediction 0.924858208949275 Functional Gain - HMSD ENSG00000221887 CDS Human protein_coding chr18:61621780 chr18:61621780 nonsynonymous SNV 0.146 1 21 hPsi_associated_SNPs_103676 0 0 0 0 0 Dendrite 0 0.438785141944668 0.993057012557984 0 hPsi_site_2636 iPseU_CNN:0.993057012557984;iRNA_PseU:0 2637 chr3 42679340 42679340 1 + C T SKCM 42679340 + 42679320 42679360 41 ATCACGTAGTCTAGCTAGTTCACATTCAAGGTCTAGGTCTC ATCACGTAGTCTAGCTAGTTTACATTCAAGGTCTAGGTCTC Direct Gain 0 0.962412378488675 0 1 prediction 0.924824756977351 Functional Gain - NKTR ENSG00000114857 CDS Human protein_coding chr3:42679340 chr3:42679340 nonsynonymous SNV 0.852 4 21 hPsi_associated_SNPs_103677 0 0 1 0 0 Nucleus 0 0.438718623364379 1 0 hPsi_site_2637 iPseU_CNN:1;iRNA_PseU:0 2638 chrX 135586542 135586542 1 + G A LUAD 135586542 - 135586522 135586562 41 GGATGGTCCGGCTCGCCTCTCAGGTCTCCAATCCAACTGCC GGATGGTCCGGCTCGCCTCTTAGGTCTCCAATCCAACTGCC Direct Gain 0 0.962411755121609 0 0.391152024269104 prediction 0.924823510243218 Functional Gain - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135586542 chrX:135586542 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103678 0 0 0 0 0 Ribosome 0 0.438729701186962 0 0 hPsi_site_2638 iPseU_CNN:0;iRNA_PseU:0 2639 chr9 138457279 138457279 1 + G A LUSC 138457279 - 138457259 138457299 41 GATGAATCCCTGCATGATCTCATCGTCCTCCACCAGGACTC GATGAATCCCTGCATGATCTTATCGTCCTCCACCAGGACTC Direct Gain 0 0.962386018927017 0 0.990734577178955 prediction 0.924772037854034 Functional Gain - PAEP ENSG00000122133 CDS Human protein_coding chr9:138457279 chr9:138457279 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_103679 0 0 0 0 0 chromatin 0 0.437025994064298 0.98146915435791 0 hPsi_site_2639 iPseU_CNN:0.98146915435791;iRNA_PseU:0 2640 chr2 112786199 112786199 1 + C T SKCM 112786199 + 112786179 112786219 41 GTGTGGTCACAGCAGAAGTTCATGACAGCAAACCTCATGAA GTGTGGTCACAGCAGAAGTTTATGACAGCAAACCTCATGAA Direct Gain 0 0.962385040476325 0 0.27942156791687 prediction 0.924770080952651 Functional Gain - MERTK ENSG00000153208 CDS Human protein_coding chr2:112786199 chr2:112786199 nonsynonymous SNV 0.921 3 21 hPsi_associated_SNPs_103680 0 0 0 0 0 Endoplasmic reticulum 0 0.438652037531732 0 0 hPsi_site_2640 iPseU_CNN:0;iRNA_PseU:0 2641 chr12 54379110 54379110 1 + G A SKCM 54379110 - 54379090 54379130 41 TGCGCTCCGGCTATAGCGCTCTCCTCCGCCGGGCGCAGCCA TGCGCTCCGGCTATAGCGCTTTCCTCCGCCGGGCGCAGCCA Direct Gain 0 0.962384355200367 0 0.999999284744263 prediction 0.924768710400734 Functional Gain - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54379110 chr12:54379110 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103681 0 0 0 0 0 exosome 0 0.438686029559863 0.999998569488526 0 hPsi_site_2641 iPseU_CNN:0.999998569488526;iRNA_PseU:0 2642 chr19 52448864 52448864 1 + G A UCEC 52448864 - 52448844 52448884 41 GTCTGAGCTGCCACAGAAGGCATCTGCAGAGTCACCATGTT GTCTGAGCTGCCACAGAAGGTATCTGCAGAGTCACCATGTT Direct Gain 0 0.962375954603591 0 0.172024637460709 prediction 0.924751909207181 Functional Gain - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52448864 chr19:52448864 nonsynonymous SNV 0.540 0 21 hPsi_associated_SNPs_103682 0 0 0 0 0 nucleus 0 0.438760030854015 0 0 hPsi_site_2642 iPseU_CNN:0;iRNA_PseU:0 2643 chr11 125478132 125478132 1 + C A UCEC 125478132 - 125478112 125478152 41 AGGACAAAGCCTACCAGAGAGATGACGCTCCGGAAAAGAAC AGGACAAAGCCTACCAGAGATATGACGCTCCGGAAAAGAAC Direct Gain 0 0.962354881180308 0 0.973106622695923 prediction 0.924709762360616 Functional Gain - STT3A ENSG00000134910 CDS Human protein_coding chr11:125478132 chr11:125478132 synonymous SNV . 0 21 hPsi_associated_SNPs_103683 0 0 0 0 0 Endoplasmic reticulum 0 0.438718379982061 0.946213245391846 0 hPsi_site_2643 iPseU_CNN:0.946213245391846;iRNA_PseU:0 2644 chr3 54905644 54905644 1 + G A SKCM 54905644 - 54905624 54905664 41 AAACAAATCACTTACCACGTCATCTCGGTCTTCCCACTCCA AAACAAATCACTTACCACGTTATCTCGGTCTTCCCACTCCA Direct Gain 0 0.962326884475979 0 0.981277942657471 prediction 0.924653768951958 Functional Gain - CACNA2D3 ENSG00000157445 CDS Human protein_coding chr3:54905644 chr3:54905644 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_103684 0 0 0 0 0 Nucleus 0 0.43837936283934 0.962555885314942 0 hPsi_site_2644 iPseU_CNN:0.962555885314942;iRNA_PseU:0 2645 chr1 36383973 36383973 1 + C A OV 36383973 - 36383953 36383993 41 TCAAACTCAAATGGGTGGGTGATGTTGGTGTCCACTGTGGT TCAAACTCAAATGGGTGGGTTATGTTGGTGTCCACTGTGGT Direct Gain 0 0.962314134223274 0 0.914366245269775 prediction 0.924628268446548 Functional Gain - AGO1 ENSG00000092847 CDS Human protein_coding chr1:36383973 chr1:36383973 synonymous SNV . 0 21 hPsi_associated_SNPs_103685 0 0 0 0 0 Cytosol 0 0.439075393940584 0.82873249053955 0 hPsi_site_2645 iPseU_CNN:0.82873249053955;iRNA_PseU:0 2646 chr16 3406411 3406411 1 + G A SARC 3406411 - 3406391 3406431 41 AGAGTGAATGTTGACTGGATCACAGAGTTGCCCAAGCCACC AGAGTGAATGTTGACTGGATTACAGAGTTGCCCAAGCCACC Direct Gain 0 0.962313698329093 0 0.0287507772445679 prediction 0.924627396658186 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406411 chr16:3406411 synonymous SNV . 0 21 hPsi_associated_SNPs_103686 0 0 0 0 0 unknown 0 0.438718574169529 0 0 hPsi_site_2646 iPseU_CNN:0;iRNA_PseU:0 2647 chr19 12975882 12975882 1 + C T BLCA 12975882 + 12975862 12975902 41 TCCTTATCACCTCCATGGGTCACATCAAGCTCACAGATTTC TCCTTATCACCTCCATGGGTTACATCAAGCTCACAGATTTC Direct Gain 0 0.962312393886163 0 0.992639780044556 prediction 0.924624787772327 Functional Gain - MAST1 ENSG00000105613 CDS Human protein_coding chr19:12975882 chr19:12975882 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103687 0 0 0 0 1 Endoplasmic reticulum 0 0.438712913363863 0.985279560089112 0 hPsi_site_2647 iPseU_CNN:0.985279560089112;iRNA_PseU:0 2648 chr2 65299000 65299000 1 + G T LUSC 65299000 + 65298980 65299020 41 ACAGCCTGTGTTCTCTGGGGGTGATGCTTCTGGGCTAGGCA ACAGCCTGTGTTCTCTGGGGTTGATGCTTCTGGGCTAGGCA Direct Gain 0 0.962309025423838 0 0.997002124786377 prediction 0.924618050847676 Functional Gain - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65299000 chr2:65299000 nonsynonymous SNV 0.229 0 21 hPsi_associated_SNPs_103688 0 0 0 0 0 Cytosol 0 0.438718592992853 0.994004249572754 0 hPsi_site_2648 iPseU_CNN:0.994004249572754;iRNA_PseU:0 2649 chr8 134239704 134239704 1 + C T rs35938742 134239704 + 134239684 134239724 41 CCAGAGGCATCCATGAACTTCACACTTGCGGGCTGCATCAG CCAGAGGCATCCATGAACTTTACACTTGCGGGCTGCATCAG Direct Gain 0 0.962300455094097 0 0.943020939826965 prediction 0.924600910188194 Functional Gain - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134239704 chr8:134239704 nonsynonymous SNV 0.933 1 21 hPsi_associated_SNPs_103689 0 0 0 0 1 nucleus 0 0.437815873253945 0.88604187965393 0 hPsi_site_2649 iPseU_CNN:0.88604187965393;iRNA_PseU:0 2650 chr2 172604376 172604376 1 + G A UCEC 172604376 - 172604356 172604396 41 AGCAGGTATTCGGGTAGCTGCTTCCTCCTCTGCATCAGCTC AGCAGGTATTCGGGTAGCTGTTTCCTCCTCTGCATCAGCTC Direct Gain 0 0.962299085939904 0 0.963014960289001 prediction 0.924598171879809 Functional Gain - DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172604376 chr2:172604376 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103690 0 0 0 0 0 Cytosol 0 0.438718592612784 0.926029920578002 0 hPsi_site_2650 iPseU_CNN:0.926029920578002;iRNA_PseU:0 2651 chr16 29912596 29912596 1 + G A SKCM 29912596 - 29912576 29912616 41 AGCCCCTAGGGCCTGCATGTCTTGGGAGCCCAGGCGGTAGC AGCCCCTAGGGCCTGCATGTTTTGGGAGCCCAGGCGGTAGC Direct Gain 0 0.962298434007511 0 0.999202966690063 prediction 0.924596868015021 Functional Gain - ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912596 chr16:29912596 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_103691 0 0 0 0 0 nucleus 0 0.438718596077439 0.998405933380126 0 hPsi_site_2651 iPseU_CNN:0.998405933380126;iRNA_PseU:0 2652 chr15 40257951 40257951 1 + C T LGG 40257951 + 40257931 40257971 41 ACAGCCACTGGTGGCTTTGTCTTGTTGTATGAGTGGGTCCT ACAGCCACTGGTGGCTTTGTTTTGTTGTATGAGTGGGTCCT Direct Gain 0 0.962297420376888 0 0.889729797840118 prediction 0.924594840753775 Functional Gain - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40257951 chr15:40257951 synonymous SNV . 0 21 hPsi_associated_SNPs_103692 0 0 1 0 2 Ribosome 0 0.438718618749299 0.779459595680236 0 hPsi_site_2652 iPseU_CNN:0.779459595680236;iRNA_PseU:0 2653 chr5 80604814 80604814 1 + G A LUSC 80604814 - 80604794 80604834 41 TTATCAGGACAAGATCTAGACAGGTGCCCCATTTCTCCACA TTATCAGGACAAGATCTAGATAGGTGCCCCATTTCTCCACA Direct Gain 0 0.962283425070143 0 0.999773502349854 prediction 0.924566850140287 Functional Gain - ZCCHC9 ENSG00000131732 CDS Human protein_coding chr5:80604814 chr5:80604814 synonymous SNV . 0 21 hPsi_associated_SNPs_103693 0 0 0 0 0 Cytosol 0 0.438718715820517 0.999547004699708 0 hPsi_site_2653 iPseU_CNN:0.999547004699708;iRNA_PseU:0 2654 chr2 220045446 220045446 1 + G A MESO 220045446 - 220045426 220045466 41 GGAAATCATAATCCCTGGAACATAGTGTCCCAACACAGCCA GGAAATCATAATCCCTGGAATATAGTGTCCCAACACAGCCA Direct Gain 0 0.962279809543512 0 0.0131841599941254 prediction 0.924559619087024 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220045446 chr2:220045446 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103694 0 0 0 0 0 unknown 0 0.438718593011066 0 0 hPsi_site_2654 iPseU_CNN:0;iRNA_PseU:0 2655 chr11 64124980 64124980 1 + G A rs542907 64124980 - 64124960 64125000 41 GGCTGCAGTTCAGCTTTATTCTCATGCCCCTCATGTCCAGT GGCTGCAGTTCAGCTTTATTTTCATGCCCCTCATGTCCAGT Direct Gain 0 0.96226501631601 0 0.999907851219177 prediction 0.924530032632021 Functional Gain - CCDC88B ENSG00000168071 UTR3 Human protein_coding chr11:64124980 chr11:64124980 . . 0 21 hPsi_associated_SNPs_103695 0 0 0 0 0 Ribosome 0 0.438746172366069 0.999815702438354 0 hPsi_site_2655 iPseU_CNN:0.999815702438354;iRNA_PseU:0 2656 chr3 122335903 122335903 1 + G A SKCM 122335903 - 122335883 122335923 41 AATTGCACCGATTTTCATTTCATATGCTGTGAAACAAGGCT AATTGCACCGATTTTCATTTTATATGCTGTGAAACAAGGCT Direct Gain 0 0.962260552324254 0 0.999967098236084 prediction 0.924521104648507 Functional Gain - PARP15 ENSG00000173200 CDS Human protein_coding chr3:122335903 chr3:122335903 nonsynonymous SNV 0.075 0 21 hPsi_associated_SNPs_103696 0 0 0 0 0 exosome 0 0.440063794776262 0.999934196472168 0 hPsi_site_2656 iPseU_CNN:0.999934196472168;iRNA_PseU:0 2657 chr2 157426664 157426664 1 + G A KIRC 157426664 - 157426644 157426684 41 ATAGGCCACCTTTTGCCAGTCACACTTGCCATTTTGGCCAC ATAGGCCACCTTTTGCCAGTTACACTTGCCATTTTGGCCAC Direct Gain 0 0.962257411090801 0 0.994562864303589 prediction 0.924514822181603 Functional Gain - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157426664 chr2:157426664 synonymous SNV . 0 21 hPsi_associated_SNPs_103697 0 0 0 0 0 Endoplasmic reticulum 0 0.438729577691714 0.989125728607178 0 hPsi_site_2657 iPseU_CNN:0.989125728607178;iRNA_PseU:0 2658 chr3 9743959 9743959 1 + G A rs146925501 9743959 - 9743939 9743979 41 AGGTAGGGTCTTTGTGAAGTCATGGCTTCCACAAGGCCCCA AGGTAGGGTCTTTGTGAAGTTATGGCTTCCACAAGGCCCCA Direct Gain 0 0.962255365370284 0 0.999940633773804 prediction 0.924510730740568 Functional Gain - MTMR14 ENSG00000163719 UTR3 Human protein_coding chr3:9743959 chr3:9743959 . . 0 21 hPsi_associated_SNPs_103698 0 0 0 0 0 Ribosome 0 0.438717954001644 0.999881267547608 0 hPsi_site_2658 iPseU_CNN:0.999881267547608;iRNA_PseU:0 2659 chrX 15768171 15768171 1 + G T OV 15768171 + 15768151 15768191 41 TGGTGATGAACAGCCTGAGGGTCATTCTTCAAGCCTCTCCA TGGTGATGAACAGCCTGAGGTTCATTCTTCAAGCCTCTCCA Direct Gain 0 0.962246903071095 0 0.999043524265289 prediction 0.924493806142189 Functional Gain - CA5B ENSG00000169239 CDS Human protein_coding chrX:15768171 chrX:15768171 nonsynonymous SNV 0.884 0 21 hPsi_associated_SNPs_103699 0 0 0 0 1 Nucleus 0 0.438728000331689 0.998087048530578 0 hPsi_site_2659 iPseU_CNN:0.998087048530578;iRNA_PseU:0 2660 chr17 45909502 45909502 1 + G A PAAD 45909502 - 45909482 45909522 41 TGATAAGGGCTTCAGTGATGCAGACGCCCCCTTCCTCTGGA TGATAAGGGCTTCAGTGATGTAGACGCCCCCTTCCTCTGGA Direct Gain 0 0.962230580890706 0 0.999997317790985 prediction 0.924461161781413 Functional Gain - LRRC46 ENSG00000141294 CDS Human protein_coding chr17:45909502 chr17:45909502 nonsynonymous SNV 0.565 0 21 hPsi_associated_SNPs_103700 0 0 0 0 0 exosome 0 0.43872190393675 0.99999463558197 0 hPsi_site_2660 iPseU_CNN:0.99999463558197;iRNA_PseU:0 2661 chr19 54697246 54697246 1 + G A rs2289145 54697246 - 54697226 54697266 41 AGAAAGGCTCTTGCTGCCGACACAGCCACATCCCCTAGGTC AGAAAGGCTCTTGCTGCCGATACAGCCACATCCCCTAGGTC Direct Gain 0 0.962223872393302 0 0.945737719535828 prediction 0.924447744786604 Functional Gain - TSEN34 ENSG00000170892 UTR3 Human protein_coding chr19:54697246 chr19:54697246 . . 0 21 hPsi_associated_SNPs_103701 2 0 0 0 0 Ribosome 0 0.43871859295004 0.891475439071656 0 hPsi_site_2661 iPseU_CNN:0.891475439071656;iRNA_PseU:0 2662 chr4 947011 947011 1 + C T UCEC 947011 + 946991 947031 41 GGTACGCATTCCACTTCCCGCACCTGCTGAGCCCGCAGATC GGTACGCATTCCACTTCCCGTACCTGCTGAGCCCGCAGATC Direct Gain 0 0.962218801334585 0 0.993273258209229 prediction 0.924437602669171 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:947011 chr4:947011 nonsynonymous SNV 0.065 0 21 hPsi_associated_SNPs_103702 0 0 0 0 1 chromatin 0 0.438718592994841 0.986546516418458 0 hPsi_site_2662 iPseU_CNN:0.986546516418458;iRNA_PseU:0 2663 chr3 89499345 89499345 1 + G A LUAD 89499345 - 89499325 89499365 41 GGGTGGCAGTCGATAGCCCTCATCTACAGCTTTAATTACCT GGGTGGCAGTCGATAGCCCTTATCTACAGCTTTAATTACCT Direct Gain 0 0.962218105503055 0 0.999687910079956 prediction 0.92443621100611 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89499345 chr3:89499345 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_103703 0 0 0 0 0 Ribosome 0 0.438718593000017 0.999375820159912 0 hPsi_site_2663 iPseU_CNN:0.999375820159912;iRNA_PseU:0 2664 chr2 204295450 204295450 1 + G A rs146289944 204295450 - 204295430 204295470 41 AGGAGGGGATGAAAATGTCTCACACCCAGTAACTTTTAGGA AGGAGGGGATGAAAATGTCTTACACCCAGTAACTTTTAGGA Direct Gain 0 0.962214812561473 0 0.0291301310062408 prediction 0.924429625122945 Functional Gain - ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204295450 chr2:204295450 . . 0 21 hPsi_associated_SNPs_103704 0 0 0 0 0 Cytosol 0 0.438718796198693 0 0 hPsi_site_2664 iPseU_CNN:0;iRNA_PseU:0 2665 chr19 44086481 44086481 1 + C T rs532639828 44086481 + 44086461 44086501 41 CTCAGGTGATTCTCTCACGTCAGCCTCCCTAGTAGCTGGCA CTCAGGTGATTCTCTCACGTTAGCCTCCCTAGTAGCTGGCA Direct Gain 0 0.962214749641548 0 0.784195780754089 prediction 0.924429499283097 Functional Gain - PINLYP ENSG00000268361 intronic Human protein_coding chr19:44086481 chr19:44086481 . . 0 21 hPsi_associated_SNPs_103705 0 0 0 0 0 exosome 0 0.438718469650773 0.568391561508178 0 hPsi_site_2665 iPseU_CNN:0.568391561508178;iRNA_PseU:0 2666 chr19 48245253 48245253 1 + C T rs192939514 48245253 + 48245233 48245273 41 ACACCCTCAACCGGCTCCATCACATCCTCAGGTCTCGGGAC ACACCCTCAACCGGCTCCATTACATCCTCAGGTCTCGGGAC Direct Gain 0 0.962207151723339 0 0.999134659767151 prediction 0.924414303446677 Functional Gain - EHD2 ENSG00000024422 UTR3 Human protein_coding chr19:48245253 chr19:48245253 . . 0 21 hPsi_associated_SNPs_103706 0 0 1 0 0 Nucleus 0 0.438702087328381 0.998269319534302 0 hPsi_site_2666 iPseU_CNN:0.998269319534302;iRNA_PseU:0 2667 chr5 89933641 89933641 1 + G T UCEC 89933641 + 89933621 89933661 41 CAAAAGCAGTGACCCCGGATGATATAGGCCCCTTTAATGGC CAAAAGCAGTGACCCCGGATTATATAGGCCCCTTTAATGGC Direct Gain 0 0.962201228062364 0 0.566571712493896 prediction 0.924402456124727 Functional Gain - ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:89933641 chr5:89933641 nonsynonymous SNV 0.981 4 21 hPsi_associated_SNPs_103707 0 0 1 0 1 Nucleus 0 0.438718593092832 0.133143424987792 0 hPsi_site_2667 iPseU_CNN:0.133143424987792;iRNA_PseU:0 2668 chr12 2805123 2805123 1 + G T rs576174010 2805123 + 2805103 2805143 41 GGGTTGAGCTCTAGATGAGGGACTTTCCTGCTCCTGCAAGG GGGTTGAGCTCTAGATGAGGTACTTTCCTGCTCCTGCAAGG Direct Gain 0 0.962200842370752 0 0.999010741710663 prediction 0.924401684741504 Functional Gain - CACNA1C ENSG00000151067;ENSG00000256150 intergenic Human other chr12:2805123 chr12:2805123 . . 0 21 hPsi_associated_SNPs_103708 2 0 0 0 0 Cytosol 0 0.438718443876432 0.998021483421326 0 hPsi_site_2668 iPseU_CNN:0.998021483421326;iRNA_PseU:0 2669 chr4 22694616 22694616 1 + C A LUSC 22694616 - 22694596 22694636 41 TTTAAGAAGCTGTCTACTGGGATCTTCAGCTGCCAGAAGCA TTTAAGAAGCTGTCTACTGGTATCTTCAGCTGCCAGAAGCA Direct Gain 0 0.96219806278026 0 0.241169184446335 prediction 0.924396125560521 Functional Gain - GBA3 ENSG00000249948 UTR5 Human polymorphic_pseudogene chr4:22694616 chr4:22694616 . . 0 21 hPsi_associated_SNPs_103709 0 0 0 0 0 unknown 0 0.439291426653686 0 0 hPsi_site_2669 iPseU_CNN:0;iRNA_PseU:0 2670 chr2 29006829 29006829 1 + G T SKCM 29006829 + 29006809 29006849 41 GGAGAATTATGAGACCTACTGATGTCCCTGATACAGGTAAG GGAGAATTATGAGACCTACTTATGTCCCTGATACAGGTAAG Direct Gain 0 0.962187159286256 0 0.997499465942383 prediction 0.924374318572513 Functional Gain - PPP1CB ENSG00000213639 CDS Human protein_coding chr2:29006829 chr2:29006829 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103710 0 0 1 0 2 Ribosome 0 0.438718592995105 0.994998931884766 0 hPsi_site_2670 iPseU_CNN:0.994998931884766;iRNA_PseU:0 2671 chr14 59112475 59112475 1 + C T rs863091 59112475 + 59112455 59112495 41 AGGAACGGGAGCGTTTGTGTCAGAGCCCCGGGCGGTGTCTC AGGAACGGGAGCGTTTGTGTTAGAGCCCCGGGCGGTGTCTC Direct Gain 0 0.962176250892751 0 0.998166084289551 prediction 0.924352501785501 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112475 chr14:59112475 synonymous SNV . 0 21 hPsi_associated_SNPs_103711 0 0 0 0 0 exosome 0 0.438718483025665 0.996332168579102 0 hPsi_site_2671 iPseU_CNN:0.996332168579102;iRNA_PseU:0 2672 chr2 27172709 27172709 1 + C T rs545428186 27172709 + 27172689 27172729 41 AGAGCTCCAGCCAGCTTCGTCACCAGCCCCACTGGCTCCTG AGAGCTCCAGCCAGCTTCGTTACCAGCCCCACTGGCTCCTG Direct Gain 0 0.962166450411686 0 0.999999463558197 prediction 0.924332900823372 Functional Gain - DPYSL5 ENSG00000157851 UTR3 Human protein_coding chr2:27172709 chr2:27172709 . . 0 21 hPsi_associated_SNPs_103712 0 0 0 0 0 Ribosome 0 0.438697167175789 0.999998927116394 0 hPsi_site_2672 iPseU_CNN:0.999998927116394;iRNA_PseU:0 2673 chr1 43909455 43909455 1 + C T SKCM 43909455 + 43909435 43909475 41 GGTACCACTGCGGCCCCCCTCACCCGCCCGCAGGTGAGCCC GGTACCACTGCGGCCCCCCTTACCCGCCCGCAGGTGAGCCC Direct Gain 0 0.962152288909167 0 0.349368333816528 prediction 0.924304577818334 Functional Gain - SZT2 ENSG00000198198 CDS Human protein_coding chr1:43909455 chr1:43909455 nonsynonymous SNV 0.872 4 21 hPsi_associated_SNPs_103713 0 0 1 0 1 Cytosol 0 0.438718588563804 0 0 hPsi_site_2673 iPseU_CNN:0;iRNA_PseU:0 2674 chr7 123672284 123672284 1 + G A LIHC 123672284 - 123672264 123672304 41 TTTCTGGATGAGATCTTCTTCACCTTCTTCTTCAACGTACT TTTCTGGATGAGATCTTCTTTACCTTCTTCTTCAACGTACT Direct Gain 0 0.962147939300777 0 0.726830244064331 prediction 0.924295878601553 Functional Gain - TMEM229A ENSG00000234224 CDS Human protein_coding chr7:123672284 chr7:123672284 synonymous SNV . 0 21 hPsi_associated_SNPs_103714 0 0 0 0 0 exosome 0 0.43871532697209 0.453660488128662 0 hPsi_site_2674 iPseU_CNN:0.453660488128662;iRNA_PseU:0 2675 chr11 118765087 118765087 1 + C T rs2230321 118765087 + 118765067 118765107 41 TGGTCACCCTACCACATCGTCATCTTCCTGGACACCCTGGC TGGTCACCCTACCACATCGTTATCTTCCTGGACACCCTGGC Direct Gain 0 0.962143585091008 0 0.996314108371735 prediction 0.924287170182016 Functional Gain - CXCR5 ENSG00000160683 CDS Human protein_coding chr11:118765087 chr11:118765087 synonymous SNV . 0 21 hPsi_associated_SNPs_103715 0 0 0 0 0 chromatin 0 0.438562058289796 0.99262821674347 0 hPsi_site_2675 iPseU_CNN:0.99262821674347;iRNA_PseU:0 2676 chr19 46026053 46026053 1 + G T UCEC 46026053 + 46026033 46026073 41 GGTGGGGGACTCATGGAAGAGATGAACGCCATGCTGGCCCG GGTGGGGGACTCATGGAAGATATGAACGCCATGCTGGCCCG Direct Gain 0 0.962139108713895 0 0.906470119953156 prediction 0.92427821742779 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46026053 chr19:46026053 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103716 0 0 1 0 3 Ribosome 0 0.438645426499845 0.812940239906312 0 hPsi_site_2676 iPseU_CNN:0.812940239906312;iRNA_PseU:0 2677 chr9 133557989 133557989 1 + G A rs148920702 133557989 - 133557969 133558009 41 GCTCGGAAGCGCTTCGTGGCCACAGAAGCCACCTTAACCTC GCTCGGAAGCGCTTCGTGGCTACAGAAGCCACCTTAACCTC Direct Gain 0 0.962135695766916 0 0.999654471874237 prediction 0.924271391533833 Functional Gain - PRDM12 ENSG00000130711 UTR3 Human protein_coding chr9:133557989 chr9:133557989 . . 0 21 hPsi_associated_SNPs_103717 0 0 0 0 0 exosome 0 0.438580192482726 0.999308943748474 0 hPsi_site_2677 iPseU_CNN:0.999308943748474;iRNA_PseU:0 2678 chr17 80772748 80772748 1 + G T BLCA 80772748 + 80772728 80772768 41 TGACAAGGCGTGGCATGGGGGATGTCTGGCGCTGGCAGAGC TGACAAGGCGTGGCATGGGGTATGTCTGGCGCTGGCAGAGC Direct Gain 0 0.962123144078776 0 0.375234454870224 prediction 0.924246288157552 Functional Gain - TBCD ENSG00000141556 CDS Human protein_coding chr17:80772748 chr17:80772748 nonsynonymous SNV 0.894 4 21 hPsi_associated_SNPs_103718 0 0 1 0 2 Nucleus 0 0.438624531572999 0 0 hPsi_site_2678 iPseU_CNN:0;iRNA_PseU:0 2679 chr8 134034297 134034297 1 + G T COAD 134034297 + 134034277 134034317 41 GGACAGGGAGGAGAGTGAAGGATGGCCGGCTATCGACGGCT GGACAGGGAGGAGAGTGAAGTATGGCCGGCTATCGACGGCT Direct Gain 0 0.962117095360578 0 0.994365632534027 prediction 0.924234190721156 Functional Gain - TG ENSG00000042832 CDS Human protein_coding chr8:134034297 chr8:134034297 nonsynonymous SNV 0.001 2 21 hPsi_associated_SNPs_103719 0 0 0 0 2 Nucleus 0 0.438718593099902 0.988731265068054 0 hPsi_site_2679 iPseU_CNN:0.988731265068054;iRNA_PseU:0 2680 chr5 140755265 140755265 1 + G T SKCM 140755265 + 140755245 140755285 41 TGACAGCCAGCGACAGCGGGGACCCGCCTCTTAGCAGCAAC TGACAGCCAGCGACAGCGGGTACCCGCCTCTTAGCAGCAAC Direct Gain 0 0.962114302227883 0 0.915355682373047 prediction 0.924228604455767 Functional Gain - PCDHGA6 ENSG00000253731 CDS Human protein_coding chr5:140755265 chr5:140755265 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_103720 0 0 0 0 0 exosome 0 0.438731304709996 0.830711364746094 0 hPsi_site_2680 iPseU_CNN:0.830711364746094;iRNA_PseU:0 2681 chr12 3049891 3049891 1 + G A rs571642342 3049891 - 3049871 3049911 41 GCTGCCAGTTGGCCCTCCTTCACATGCTTATCTGATGTGGT GCTGCCAGTTGGCCCTCCTTTACATGCTTATCTGATGTGGT Direct Gain 0 0.96211240275977 0 0.999998986721039 prediction 0.924224805519539 Functional Gain - TULP3 ENSG00000078246 CDS Human protein_coding chr12:3049891 chr12:3049891 synonymous SNV . 0 21 hPsi_associated_SNPs_103721 0 0 0 0 0 Cytosol 0 0.438718620494891 0.999997973442078 0 hPsi_site_2681 iPseU_CNN:0.999997973442078;iRNA_PseU:0 2682 chr1 151237944 151237944 1 + G T LIHC 151237944 + 151237924 151237964 41 GGAACCGGTTCTCATCTGGTGACAGTGCCTCCTGGGCCCAG GGAACCGGTTCTCATCTGGTTACAGTGCCTCCTGGGCCCAG Direct Gain 0 0.962107780006477 0 0.997672915458679 prediction 0.924215560012954 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151237944 chr1:151237944 synonymous SNV . 0 21 hPsi_associated_SNPs_103722 0 0 0 0 1 Ribosome 0 0.438716076785933 0.995345830917358 0 hPsi_site_2682 iPseU_CNN:0.995345830917358;iRNA_PseU:0 2683 chr2 202025610 202025610 1 + C A LUSC 202025610 - 202025590 202025630 41 GTACAGGGATGGTGAGCTGTGAGACTGCTCCAGCAGGGACA GTACAGGGATGGTGAGCTGTTAGACTGCTCCAGCAGGGACA Direct Gain 0 0.962102259909796 0 0.988736033439636 prediction 0.924204519819593 Functional Gain - CFLAR ENSG00000003402 CDS Human protein_coding chr2:202025610 chr2:202025610 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103723 0 0 0 0 0 Cytosol 0 0.438993100058772 0.977472066879272 0 hPsi_site_2683 iPseU_CNN:0.977472066879272;iRNA_PseU:0 2684 chr2 1488544 1488544 1 + C A rs146768724 1488544 - 1488524 1488564 41 GGGTGCTCCTGGAAGCTGGCGTCCAGCCTCCTCACCAGCGG GGGTGCTCCTGGAAGCTGGCTTCCAGCCTCCTCACCAGCGG Direct Gain 0 0.962097694212425 0 0.999892294406891 prediction 0.92419538842485 Functional Gain - TPO ENSG00000115705 CDS Human protein_coding chr2:1488544 chr2:1488544 nonsynonymous SNV 0.000 2 21 hPsi_associated_SNPs_103724 0 0 0 0 0 exosome 0 0.438718561194138 0.999784588813782 0 hPsi_site_2684 iPseU_CNN:0.999784588813782;iRNA_PseU:0 2685 chr16 67696615 67696615 1 + G T rs545843775 67696615 + 67696595 67696635 41 GCAGGGACTTCACAGTGGGGGTTTTTAGCTGGCTCACAGGG GCAGGGACTTCACAGTGGGGTTTTTTAGCTGGCTCACAGGG Direct Gain 0 0.962090976368593 0 0.993744194507599 prediction 0.924181952737186 Functional Gain - PARD6A ENSG00000102981 UTR3 Human protein_coding chr16:67696615 chr16:67696615 . . 0 21 hPsi_associated_SNPs_103725 0 0 0 0 0 Ribosome 0 0.438718204443044 0.987488389015198 0 hPsi_site_2685 iPseU_CNN:0.987488389015198;iRNA_PseU:0 2686 chr19 58863875 58863875 1 + G A BLCA 58863875 - 58863855 58863895 41 ATGGCGCCAGTGTCCTGGATCACCCCCGGCCTGAAAACAAC ATGGCGCCAGTGTCCTGGATTACCCCCGGCCTGAAAACAAC Direct Gain 0 0.962089587217543 0 0.960687160491943 prediction 0.924179174435086 Functional Gain - A1BG ENSG00000121410 CDS Human protein_coding chr19:58863875 chr19:58863875 synonymous SNV . 0 21 hPsi_associated_SNPs_103726 0 0 1 0 0 nucleus 0 0.438706735557278 0.921374320983886 0 hPsi_site_2686 iPseU_CNN:0.921374320983886;iRNA_PseU:0 2687 chr21 45821610 45821610 1 + G A UCEC 45821610 - 45821590 45821630 41 CACGGGTGCGGTGAAGAAGGCACGGGCGCGGGCCGCGGGGG CACGGGTGCGGTGAAGAAGGTACGGGCGCGGGCCGCGGGGG Direct Gain 0 0.962081275364077 0 0.99998950958252 prediction 0.924162550728153 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45821610 chr21:45821610 nonsynonymous SNV 0.691 0 21 hPsi_associated_SNPs_103727 0 0 0 0 0 Ribosome 0 0.438874145362655 0.99997901916504 0 hPsi_site_2687 iPseU_CNN:0.99997901916504;iRNA_PseU:0 2688 chr8 53852671 53852671 1 + G A CESC 53852671 - 53852651 53852691 41 AACAGGTTGGTGACGGTCTTCATGCGGGGCGCCCGCAGCAA AACAGGTTGGTGACGGTCTTTATGCGGGGCGCCCGCAGCAA Direct Gain 0 0.962079242343308 0 0.99837452173233 prediction 0.924158484686616 Functional Gain - NPBWR1 ENSG00000183729 CDS Human protein_coding chr8:53852671 chr8:53852671 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103728 0 0 0 0 0 exosome 0 0.438718592995102 0.99674904346466 0 hPsi_site_2688 iPseU_CNN:0.99674904346466;iRNA_PseU:0 2689 chr8 99962942 99962942 1 + C A CESC 99962942 - 99962922 99962962 41 AACTGCTAGAGTTCTAGACTGACAAAATCCTTTCCCACACT AACTGCTAGAGTTCTAGACTTACAAAATCCTTTCCCACACT Direct Gain 0 0.962079064236648 0 0.936363697052002 prediction 0.924158128473296 Functional Gain - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99962942 chr8:99962942 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103729 0 0 0 0 0 exosome 0 0.43872103283233 0.872727394104004 0 hPsi_site_2689 iPseU_CNN:0.872727394104004;iRNA_PseU:0 2690 chr3 9859380 9859380 1 + G A LUSC 9859380 - 9859360 9859400 41 GCGTGGGAAGAAGGAGTTGGCATCAACCTCATCAAACCACG GCGTGGGAAGAAGGAGTTGGTATCAACCTCATCAAACCACG Direct Gain 0 0.962077848055198 0 1 prediction 0.924155696110395 Functional Gain - ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9859380 chr3:9859380 nonsynonymous SNV 0.970 0 21 hPsi_associated_SNPs_103730 0 0 0 0 0 unknown 0 0.438650568714011 1 0 hPsi_site_2690 iPseU_CNN:1;iRNA_PseU:0 2691 chr17 30535198 30535198 1 + G A OV 30535198 - 30535178 30535218 41 AGTAGGTGAAATACTGTATTCTTGTTTAACTTCATGCAGGT AGTAGGTGAAATACTGTATTTTTGTTTAACTTCATGCAGGT Direct Gain 0 0.96207650746813 0 0.300320148468018 prediction 0.92415301493626 Functional Gain - RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30535198 chr17:30535198 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_103731 0 0 0 0 0 Cytosol 0 0.438701862585246 0 0 hPsi_site_2691 iPseU_CNN:0;iRNA_PseU:0 2692 chr12 51354878 51354878 1 + G A COAD 51354878 - 51354858 51354898 41 TTAAGCGGGTTACCTAGAGTCACAGCTCCAACAACAAATCC TTAAGCGGGTTACCTAGAGTTACAGCTCCAACAACAAATCC Direct Gain 0 0.962071894088816 0 0.999843895435333 prediction 0.924143788177632 Functional Gain - HIGD1C ENSG00000214511 CDS Human protein_coding chr12:51354878 chr12:51354878 synonymous SNV . 0 21 hPsi_associated_SNPs_103732 0 0 0 0 0 exosome 0 0.438718620046574 0.999687790870666 0 hPsi_site_2692 iPseU_CNN:0.999687790870666;iRNA_PseU:0 2693 chr7 121699937 121699937 1 + G T KICH 121699937 + 121699917 121699957 41 TGAGGCCAGGAGTCTTTGCTGACATTGTAAGTAACAAGGCA TGAGGCCAGGAGTCTTTGCTTACATTGTAAGTAACAAGGCA Direct Gain 0 0.962065614212663 0 0.999976754188538 prediction 0.924131228425326 Functional Gain - PTPRZ1 ENSG00000106278 CDS Human protein_coding chr7:121699937 chr7:121699937 nonsynonymous SNV 0.976 4 21 hPsi_associated_SNPs_103733 0 0 0 0 1 exosome 0 0.438718595085831 0.999953508377076 0 hPsi_site_2693 iPseU_CNN:0.999953508377076;iRNA_PseU:0 2694 chr1 153004986 153004986 1 + G A LIHC 153004986 - 153004966 153005006 41 GGAACCTTGGGCTGGCAGGGCTCGGGCACTTTGGGGTGGCA GGAACCTTGGGCTGGCAGGGTTCGGGCACTTTGGGGTGGCA Direct Gain 0 0.962038006467609 0 0.993074357509613 prediction 0.924076012935219 Functional Gain - SPRR1B ENSG00000169469 CDS Human protein_coding chr1:153004986 chr1:153004986 synonymous SNV . 0 21 hPsi_associated_SNPs_103734 0 0 0 0 0 exosome 0 0.438718592995102 0.986148715019226 0 hPsi_site_2694 iPseU_CNN:0.986148715019226;iRNA_PseU:0 2695 chr15 65157606 65157606 1 + C T LUSC 65157606 + 65157586 65157626 41 CATGGGTGAGATGCAGGCTTCTGGGCCACCTGCTCCAGGCA CATGGGTGAGATGCAGGCTTTTGGGCCACCTGCTCCAGGCA Direct Gain 0 0.962030683755989 0 0.999993860721588 prediction 0.924061367511978 Functional Gain - PLEKHO2 ENSG00000241839 CDS Human protein_coding chr15:65157606 chr15:65157606 nonsynonymous SNV 0.590 1 21 hPsi_associated_SNPs_103735 0 0 1 0 0 chromatin 0 0.438701092919092 0.999987721443176 0 hPsi_site_2695 iPseU_CNN:0.999987721443176;iRNA_PseU:0 2696 chr10 31809914 31809914 1 + G A LUSC 31809914 - 31809894 31809934 41 CTGAGTAGGCTGCTTTAGGTCATAGTGCTTTAATTCTGGAA CTGAGTAGGCTGCTTTAGGTTATAGTGCTTTAATTCTGGAA Direct Gain 0 0.962029986123436 0 0.999925076961517 prediction 0.924059972246872 Functional Gain - ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31809914 chr10:31809914 nonsynonymous SNV 0.993 0 21 hPsi_associated_SNPs_103736 0 0 0 0 0 Nucleus 0 0.438792098198769 0.999850153923034 0 hPsi_site_2696 iPseU_CNN:0.999850153923034;iRNA_PseU:0 2697 chr19 37368135 37368135 1 + C T COAD 37368135 + 37368115 37368155 41 GTAGTGGCTCAAACCTTACTCACCATCAGAGAATTCATACT GTAGTGGCTCAAACCTTACTTACCATCAGAGAATTCATACT Direct Gain 0 0.962029801786399 0 0.999999642372131 prediction 0.924059603572798 Functional Gain - ZNF345 ENSG00000251247 CDS Human protein_coding chr19:37368135 chr19:37368135 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_103737 0 0 1 0 0 Nucleus 0 0.434938921937783 0.999999284744262 0 hPsi_site_2697 iPseU_CNN:0.999999284744262;iRNA_PseU:0 2698 chr2 131672768 131672768 1 + G T ACC 131672768 + 131672748 131672788 41 GCTTGCAAAGGGCCTCTCAGGACACTCCTTCTGCAGGTCTC GCTTGCAAAGGGCCTCTCAGTACACTCCTTCTGCAGGTCTC Direct Gain 0 0.962026826743563 0 0.995321035385132 prediction 0.924053653487126 Functional Gain - AMER3;ARHGEF4 ENSG00000136002 CDS Human protein_coding chr2:131672768 chr2:131672768 nonsynonymous SNV 0.022 1 21 hPsi_associated_SNPs_103738 0 0 0 0 0 unknown 0 0.438718640402846 0.990642070770264 0 hPsi_site_2698 iPseU_CNN:0.990642070770264;iRNA_PseU:0 2699 chr17 7329758 7329758 1 + C T READ 7329758 + 7329738 7329778 41 AGCGGCCGCAGAACTACAGACAAATCCCCCATAGCCACTCA AGCGGCCGCAGAACTACAGATAAATCCCCCATAGCCACTCA Direct Gain 0 0.962026488026171 0 0.999787926673889 prediction 0.924052976052342 Functional Gain - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329758 chr17:7329758 stopgain 0.001 0 21 hPsi_associated_SNPs_103739 0 0 0 0 0 exosome 0 0.438718572986266 0.999575853347778 0 hPsi_site_2699 iPseU_CNN:0.999575853347778;iRNA_PseU:0 2700 chr19 39912852 39912852 1 + C A rs377714958 39912852 - 39912832 39912872 41 AGGTCCCAGAGGGGTCCAGTGTTGGGGGTCCAGCATCCTCC AGGTCCCAGAGGGGTCCAGTTTTGGGGGTCCAGCATCCTCC Direct Gain 0 0.962025807295258 0 0.84819769859314 prediction 0.924051614590516 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39912852 chr19:39912852 nonsynonymous SNV 0.009 2 21 hPsi_associated_SNPs_103740 0 0 0 0 0 Nucleus 0 0.438718426332459 0.69639539718628 0 hPsi_site_2700 iPseU_CNN:0.69639539718628;iRNA_PseU:0 2701 chr12 4708311 4708311 1 + C A COAD 4708311 - 4708291 4708331 41 GGCTTGAGATCACAGTGAATGATTTTCTCTACCGAAAGCAT GGCTTGAGATCACAGTGAATTATTTTCTCTACCGAAAGCAT Direct Gain 0 0.962025471128792 0 0.999860405921936 prediction 0.924050942257584 Functional Gain - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4708311 chr12:4708311 synonymous SNV . 0 21 hPsi_associated_SNPs_103741 0 0 0 0 0 Ribosome 0 0.438753215237228 0.999720811843872 0 hPsi_site_2701 iPseU_CNN:0.999720811843872;iRNA_PseU:0 2702 chr18 55103033 55103033 1 + C T rs527450535 55103033 + 55103013 55103053 41 CGGAGCTGACAATGGAAAGTCTGGGCACTTTGCACGGGCCG CGGAGCTGACAATGGAAAGTTTGGGCACTTTGCACGGGCCG Direct Gain 0 0.962025411509093 0 0.995035529136658 prediction 0.924050823018186 Functional Gain - ONECUT2 ENSG00000119547 CDS Human protein_coding chr18:55103033 chr18:55103033 synonymous SNV . 0 21 hPsi_associated_SNPs_103742 0 0 1 0 0 nucleus 0 0.438682386047869 0.990071058273316 0 hPsi_site_2702 iPseU_CNN:0.990071058273316;iRNA_PseU:0 2703 chr8 110100126 110100126 1 + C T SKCM 110100126 + 110100106 110100146 41 AGAGGTACATAGCAATCTGTCACCCCATCAAAGCCCAGTTT AGAGGTACATAGCAATCTGTTACCCCATCAAAGCCCAGTTT Direct Gain 0 0.962015490860728 0 0.96638548374176 prediction 0.924030981721457 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110100126 chr8:110100126 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103743 0 0 0 0 0 exosome 0 0.438798562794706 0.93277096748352 0 hPsi_site_2703 iPseU_CNN:0.93277096748352;iRNA_PseU:0 2704 chr11 130342955 130342955 1 + T A OV 130342955 - 130342935 130342975 41 TGCGGGGATGGCCACCACGAAATTGTAGCCATGCCTGGCGG TGCGGGGATGGCCACCACGATATTGTAGCCATGCCTGGCGG Direct Gain 0 0.962015099322391 0 0.99377703666687 prediction 0.924030198644782 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130342955 chr11:130342955 nonsynonymous SNV 0.983 3 21 hPsi_associated_SNPs_103744 0 0 0 0 0 exosome 0 0.438591302974484 0.98755407333374 0 hPsi_site_2704 iPseU_CNN:0.98755407333374;iRNA_PseU:0 2705 chr12 57573650 57573650 1 + C A UCEC 57573650 - 57573630 57573670 41 CCATCCAGCCGGGCCACATTGATCTGCTTCTTATTGGTGTC CCATCCAGCCGGGCCACATTTATCTGCTTCTTATTGGTGTC Direct Gain 0 0.962011679169605 0 0.869165122509003 prediction 0.924023358339209 Functional Gain - LRP1 ENSG00000123384 CDS Human protein_coding chr12:57573650 chr12:57573650 synonymous SNV . 0 21 hPsi_associated_SNPs_103745 0 0 0 0 0 Exosome 0 0.438719602482511 0.738330245018006 0 hPsi_site_2705 iPseU_CNN:0.738330245018006;iRNA_PseU:0 2706 chr8 1497409 1497409 1 + G T LUAD 1497409 + 1497389 1497429 41 CCAAGGCGGACGGCCGGGCGGACGACCACCACCACGCCCAC CCAAGGCGGACGGCCGGGCGTACGACCACCACCACGCCCAC Direct Gain 0 0.962007868370598 0 0.981687009334564 prediction 0.924015736741197 Functional Gain - DLGAP2 ENSG00000198010 CDS Human protein_coding chr8:1497409 chr8:1497409 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_103746 0 0 0 0 0 nucleolus 0 0.438719980326851 0.963374018669128 0 hPsi_site_2706 iPseU_CNN:0.963374018669128;iRNA_PseU:0 2707 chr11 87038087 87038087 1 + G A rs11235100 87038087 - 87038067 87038107 41 GGGGCTAGGCATGTAACTGTCTTAAACAACATCAGTGTTCC GGGGCTAGGCATGTAACTGTTTTAAACAACATCAGTGTTCC Direct Gain 0 0.962004502257303 0 0.999497294425964 prediction 0.924009004514606 Functional Gain - TMEM135 ENSG00000270510;ENSG00000254582 intergenic Human other chr11:87038087 chr11:87038087 . . 0 21 hPsi_associated_SNPs_103747 0 0 0 0 0 Ribosome 0 0.438780488966219 0.998994588851928 0 hPsi_site_2707 iPseU_CNN:0.998994588851928;iRNA_PseU:0 2708 chr8 56924870 56924870 1 + C T rs16920208 56924870 + 56924850 56924890 41 CAGTGGTGTGCAAAATGGCTCATGTCATCACACCTCAGGTT CAGTGGTGTGCAAAATGGCTTATGTCATCACACCTCAGGTT Direct Gain 0 0.962004001984884 0 0.921946406364441 prediction 0.924008003969768 Functional Gain - LYN ENSG00000254087 downstream Human protein_coding chr8:56924870 chr8:56924870 . . 0 21 hPsi_associated_SNPs_103748 0 0 0 0 0 Cytosol 0 0.437475107383756 0.843892812728882 0 hPsi_site_2708 iPseU_CNN:0.843892812728882;iRNA_PseU:0 2709 chr16 2111908 2111908 1 + G A SKCM 2111908 - 2111888 2111928 41 CTCCACCGTGGTCAACAGGTCATGGACGATGGTCCTGAGCT CTCCACCGTGGTCAACAGGTTATGGACGATGGTCCTGAGCT Direct Gain 0 0.961998945029944 0 0.998818874359131 prediction 0.923997890059887 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2111908 chr16:2111908 nonsynonymous SNV 0.890 4 21 hPsi_associated_SNPs_103749 0 0 0 0 0 Endoplasmic reticulum 0 0.438093826804194 0.997637748718262 0 hPsi_site_2709 iPseU_CNN:0.997637748718262;iRNA_PseU:0 2710 chr19 35749940 35749940 1 + G A SKCM 35749940 - 35749920 35749960 41 GATGAGCTCTGCGTAGGCCTCATTGTTCCCCTGGAGGTCCT GATGAGCTCTGCGTAGGCCTTATTGTTCCCCTGGAGGTCCT Direct Gain 0 0.961969476944834 0 0.993860125541687 prediction 0.923938953889668 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35749940 chr19:35749940 nonsynonymous SNV 0.894 4 21 hPsi_associated_SNPs_103750 0 0 0 0 0 chromatin 0 0.438718730229547 0.987720251083374 0 hPsi_site_2710 iPseU_CNN:0.987720251083374;iRNA_PseU:0 2711 chr19 10543213 10543213 1 + G T rs540378061 10543213 + 10543193 10543233 41 ACTTCCCCTTCAGCGATGAGGACACCCGTCGGCACCCTCCG ACTTCCCCTTCAGCGATGAGTACACCCGTCGGCACCCTCCG Direct Gain 0 0.961964718254477 0 0.0854076147079468 prediction 0.923929436508954 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10543213 chr19:10543213 nonsynonymous SNV 0.976 3 21 hPsi_associated_SNPs_103751 0 0 0 0 1 chromatin 0 0.438752709821576 0 0 hPsi_site_2711 iPseU_CNN:0;iRNA_PseU:0 2712 chr15 65223826 65223826 1 + G A CESC 65223826 - 65223806 65223846 41 CTGCCGACATGGCTATGGCTCAGCAGCCAAGAGCCGACCGC CTGCCGACATGGCTATGGCTTAGCAGCCAAGAGCCGACCGC Direct Gain 0 0.961963353544939 0 0.999979853630066 prediction 0.923926707089878 Functional Gain - ANKDD1A ENSG00000166839 CDS Human protein_coding chr15:65223826 chr15:65223826 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_103752 0 0 0 0 0 nucleoplasm 0 0.438718587757413 0.999959707260132 0 hPsi_site_2712 iPseU_CNN:0.999959707260132;iRNA_PseU:0 2713 chr11 94231384 94231384 1 + G A ESCA 94231384 - 94231364 94231404 41 CCAGCCATCCACAGTCACTGCATGAACATCGGCCCCCTGTG CCAGCCATCCACAGTCACTGTATGAACATCGGCCCCCTGTG Direct Gain 0 0.961952088702021 0 0.393733322620392 prediction 0.923904177404043 Functional Gain - ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231384 chr11:94231384 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_103753 0 0 0 0 0 exosome 0 0.44156023972558 0 0 hPsi_site_2713 iPseU_CNN:0;iRNA_PseU:0 2714 chr9 119109365 119109365 1 + G A LIHC 119109365 - 119109345 119109385 41 GATGCTGCAGTCGACTGGCTCACAGGCCACCTGCTTATTCC GATGCTGCAGTCGACTGGCTTACAGGCCACCTGCTTATTCC Direct Gain 0 0.961941669267643 0 0.998341500759125 prediction 0.923883338535286 Functional Gain - PAPPA ENSG00000182752 CDS Human protein_coding chr9:119109365 chr9:119109365 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103754 0 0 0 0 0 Endoplasmic reticulum 0 0.438718610756617 0.99668300151825 0 hPsi_site_2714 iPseU_CNN:0.99668300151825;iRNA_PseU:0 2715 chr14 75469831 75469831 1 + C T LUAD 75469831 + 75469811 75469851 41 GGGTTGCTGCGCCAGATCATCACGGACCACCGCTGGAGCAA GGGTTGCTGCGCCAGATCATTACGGACCACCGCTGGAGCAA Direct Gain 0 0.961938263922561 0 0.979890465736389 prediction 0.923876527845121 Functional Gain - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75469831 chr14:75469831 synonymous SNV . 0 21 hPsi_associated_SNPs_103755 0 0 1 0 1 Ribosome 0 0.43904987488296 0.959780931472778 0 hPsi_site_2715 iPseU_CNN:0.959780931472778;iRNA_PseU:0 2716 chr11 134238581 134238581 1 + C T LUSC 134238581 + 134238561 134238601 41 ATTGTGGACGCCGGCTCCTCCATCAACCTCTACATGTTCCA ATTGTGGACGCCGGCTCCTCTATCAACCTCTACATGTTCCA Direct Gain 0 0.961920518337398 0 0.993863224983215 prediction 0.923841036674796 Functional Gain - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134238581 chr11:134238581 synonymous SNV . 0 21 hPsi_associated_SNPs_103756 0 0 1 0 1 Ribosome 0 0.439018418112413 0.98772644996643 0 hPsi_site_2716 iPseU_CNN:0.98772644996643;iRNA_PseU:0 2717 chr16 55540416 55540416 1 + C T rs2052264 55540416 + 55540396 55540436 41 GGTTTGCTTCCTCTTTAAGTCTGTTTCTTCATTAGCAATCA GGTTTGCTTCCTCTTTAAGTTTGTTTCTTCATTAGCAATCA Direct Gain 0 0.96191868159365 0 0.948692560195923 prediction 0.9238373631873 Functional Gain - MMP2 ENSG00000087245 UTR3 Human protein_coding chr16:55540416 chr16:55540416 . . 0 21 hPsi_associated_SNPs_103757 1 0 0 1 0 Endoplasmic reticulum 0 0.438350917031516 0.897385120391846 0 hPsi_site_2717 iPseU_CNN:0.897385120391846;iRNA_PseU:0 2718 chr6 74473386 74473386 1 + C T LIHC 74473386 + 74473366 74473406 41 TTATACTACTGTCTTGAAGCCATCTCTCAACTTCACAGCCA TTATACTACTGTCTTGAAGCTATCTCTCAACTTCACAGCCA Direct Gain 0 0.961918161833304 0 0.95067036151886 prediction 0.923836323666609 Functional Gain - CD109 ENSG00000156535 CDS Human protein_coding chr6:74473386 chr6:74473386 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_103758 0 0 0 0 2 Ribosome 0 0.437278986156515 0.90134072303772 0 hPsi_site_2718 iPseU_CNN:0.90134072303772;iRNA_PseU:0 2719 chr1 241886669 241886669 1 + C T UCEC 241886669 + 241886649 241886689 41 GTAGGGAAACTTGTAGGACACATGTTCAGTATCGCCGAGAT GTAGGGAAACTTGTAGGACATATGTTCAGTATCGCCGAGAT Direct Gain 0 0.961908768673084 0 0.296935319900513 prediction 0.923817537346167 Functional Gain - WDR64 ENSG00000162843 CDS Human protein_coding chr1:241886669 chr1:241886669 synonymous SNV . 0 21 hPsi_associated_SNPs_103759 0 0 0 0 2 cytosol 0 0.438727697156759 0 0 hPsi_site_2719 iPseU_CNN:0;iRNA_PseU:0 2720 chr8 104342099 104342099 1 + G A OV 104342099 - 104342079 104342119 41 GGTGAGGTTTGGATTTCTGTCAAAGTTTCTTGTCCTAGGTA GGTGAGGTTTGGATTTCTGTTAAAGTTTCTTGTCCTAGGTA Direct Gain 0 0.961905520980567 0 0.999980449676514 prediction 0.923811041961133 Functional Gain - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342099 chr8:104342099 synonymous SNV . 0 21 hPsi_associated_SNPs_103760 0 0 1 0 0 Ribosome 0 0.438718507943955 0.999960899353028 0 hPsi_site_2720 iPseU_CNN:0.999960899353028;iRNA_PseU:0 2721 chrX 9905278 9905278 1 + G A LUSC 9905278 - 9905258 9905298 41 GGGCAGGTGGCTCGGCGGGGCATGCCAGGCTCTGGCGGCTC GGGCAGGTGGCTCGGCGGGGTATGCCAGGCTCTGGCGGCTC Direct Gain 0 0.961894846633165 0 0.998387277126312 prediction 0.92378969326633 Functional Gain - SHROOM2 ENSG00000146950 CDS Human protein_coding chrX:9905278 chrX:9905278 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_103761 0 0 0 0 0 cytosol 0 0.438730564104755 0.996774554252624 0 hPsi_site_2721 iPseU_CNN:0.996774554252624;iRNA_PseU:0 2722 chrX 70368714 70368714 1 + A T UCEC 70368714 + 70368694 70368734 41 AGTAAAGCGGATTTCCAAGGAATGCGCCCGAAAGCCCAACA AGTAAAGCGGATTTCCAAGGTATGCGCCCGAAAGCCCAACA Direct Gain 0 0.961890868911274 0 0.991978764533997 prediction 0.923781737822549 Functional Gain - NLGN3 ENSG00000196338 CDS Human protein_coding chrX:70368714 chrX:70368714 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103762 0 0 0 0 2 exosome 0 0.438730903870017 0.983957529067994 0 hPsi_site_2722 iPseU_CNN:0.983957529067994;iRNA_PseU:0 2723 chr13 111956182 111956182 1 + C T rs80157749 111956182 + 111956162 111956202 41 TCCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACT TCCACCTAGAGGTGTTTGCTTTTGTCCGCTGTCTGAGTACT Direct Gain 0 0.961889965885796 0 0.99973338842392 prediction 0.923779931771591 Functional Gain - ARHGEF7 ENSG00000102606 UTR3 Human protein_coding chr13:111956182 chr13:111956182 . . 0 21 hPsi_associated_SNPs_103763 0 0 1 0 0 Nucleus 0 0.438724060097265 0.99946677684784 0 hPsi_site_2723 iPseU_CNN:0.99946677684784;iRNA_PseU:0 2724 chr4 126373239 126373239 1 + C A UCEC 126373239 - 126373219 126373259 41 GTTGCTCGTGACTGTGCTGTGAACTCCATCATTGCTAAGGA GTTGCTCGTGACTGTGCTGTTAACTCCATCATTGCTAAGGA Direct Gain 0 0.961876174323371 0 0.853600025177002 prediction 0.923752348646742 Functional Gain - FAT4 ENSG00000196159 CDS Human protein_coding chr4:126373239 chr4:126373239 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103764 0 0 0 0 0 Endoplasmic reticulum 0 0.438701786934763 0.707200050354004 0 hPsi_site_2724 iPseU_CNN:0.707200050354004;iRNA_PseU:0 2725 chr11 55890130 55890130 1 + C T BLCA 55890130 + 55890110 55890150 41 ACTTCCAACTATATTTCCTTCACGGGCTGCTTTGCCCAGAT ACTTCCAACTATATTTCCTTTACGGGCTGCTTTGCCCAGAT Direct Gain 0 0.961869632799534 0 0.200265049934387 prediction 0.923739265599068 Functional Gain - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55890130 chr11:55890130 synonymous SNV . 0 21 hPsi_associated_SNPs_103765 0 0 0 0 0 unknown 0 0.438718592995085 0 0 hPsi_site_2725 iPseU_CNN:0;iRNA_PseU:0 2726 chrX 101909826 101909826 1 + A T TGCT 101909826 + 101909806 101909846 41 GAGCTGGGAAGGAGGCCAATAACAGGGCCAGGCACAGGGCC GAGCTGGGAAGGAGGCCAATTACAGGGCCAGGCACAGGGCC Direct Gain 0 0.961867113121675 0 0.999978959560394 prediction 0.923734226243351 Functional Gain - GPRASP1 ENSG00000198932 CDS Human protein_coding chrX:101909826 chrX:101909826 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_103766 0 0 0 0 0 Cytosol 0 0.438688800982894 0.999957919120788 0 hPsi_site_2726 iPseU_CNN:0.999957919120788;iRNA_PseU:0 2727 chrX 105876175 105876175 1 + G T CHOL 105876175 + 105876155 105876195 41 TTTTTAGGTCAGAACTGGATGATATGCCAGAAAATTGCATC TTTTTAGGTCAGAACTGGATTATATGCCAGAAAATTGCATC Direct Gain 0 0.961856271814725 0 0.994250059127808 prediction 0.923712543629449 Functional Gain - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105876175 chrX:105876175 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103767 0 0 0 0 2 nucleus 0 0.438719950920651 0.988500118255616 0 hPsi_site_2727 iPseU_CNN:0.988500118255616;iRNA_PseU:0 2728 chr17 36559443 36559443 1 + C T rs536398438 36559443 + 36559423 36559463 41 AAACTCCTGCATGGCTCCTGCTCCTTCCCCTTCCCTACATT AAACTCCTGCATGGCTCCTGTTCCTTCCCCTTCCCTACATT Direct Gain 0 0.961855173692708 0 0.997310996055603 prediction 0.923710347385416 Functional Gain - SOCS7 ENSG00000174111;ENSG00000266103 intergenic Human other chr17:36559443 chr17:36559443 . . 0 21 hPsi_associated_SNPs_103768 0 0 1 0 0 Cytosol 0 0.438718086936435 0.994621992111206 0 hPsi_site_2728 iPseU_CNN:0.994621992111206;iRNA_PseU:0 2729 chr3 38043288 38043288 1 + G A BLCA 38043288 - 38043268 38043308 41 GGGGGCTCGCTGCCCATGGTCACATGCTCCTGTACTAGGAC GGGGGCTCGCTGCCCATGGTTACATGCTCCTGTACTAGGAC Direct Gain 0 0.961849834425619 0 0.999999940395355 prediction 0.923699668851237 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38043288 chr3:38043288 synonymous SNV . 0 21 hPsi_associated_SNPs_103769 0 0 0 0 0 chromatin 0 0.438936792851988 0.99999988079071 0 hPsi_site_2729 iPseU_CNN:0.99999988079071;iRNA_PseU:0 2730 chr19 10559791 10559791 1 + C T rs201822561 10559791 + 10559771 10559811 41 CGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCC CGGAGCGTCCGTAGCAACTTTTCACTCCTGACCAATGTGCC Direct Gain 0 0.961849359186696 0 0.807297050952911 prediction 0.923698718373392 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10559791 chr19:10559791 synonymous SNV . 0 21 hPsi_associated_SNPs_103770 0 0 1 0 2 chromatin 0 0.438681998249643 0.614594101905822 0 hPsi_site_2730 iPseU_CNN:0.614594101905822;iRNA_PseU:0 2731 chr3 196509602 196509602 1 + G A UCEC 196509602 - 196509582 196509622 41 GTGATTGGCTGACAAAGGGTCTTTGCCTCCAGTGCTAAAGA GTGATTGGCTGACAAAGGGTTTTTGCCTCCAGTGCTAAAGA Direct Gain 0 0.961838159332146 0 0.75997006893158 prediction 0.923676318664292 Functional Gain - PAK2 ENSG00000180370 CDS Human protein_coding chr3:196509602 chr3:196509602 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_103771 0 0 0 0 0 Ribosome 0 0.438667258784492 0.51994013786316 0 hPsi_site_2731 iPseU_CNN:0.51994013786316;iRNA_PseU:0 2732 chr6 32609786 32609786 1 + G A CESC 32609786 - 32609766 32609806 41 GTGTTGGGCTGACCCAGTGTCACGGGAGACTTGGAAAACAC GTGTTGGGCTGACCCAGTGTTACGGGAGACTTGGAAAACAC Direct Gain 0 0.961827859290104 0 0.964539885520935 prediction 0.923655718580208 Functional Gain - HLA-DQA1 ENSG00000196735 CDS Human protein_coding chr6:32609786 chr6:32609786 synonymous SNV . 0 21 hPsi_associated_SNPs_103772 0 0 0 0 0 exosome 0 0.440060417802116 0.92907977104187 0 hPsi_site_2732 iPseU_CNN:0.92907977104187;iRNA_PseU:0 2733 chr1 160106720 160106720 1 + C T LUAD 160106720 + 160106700 160106740 41 CAGCGGAAGGTGGTGGAGTTCACGTGCCACACGGCATTCTT CAGCGGAAGGTGGTGGAGTTTACGTGCCACACGGCATTCTT Direct Gain 0 0.961825576950038 0 0.999843597412109 prediction 0.923651153900076 Functional Gain - ATP1A2 ENSG00000018625 CDS Human protein_coding chr1:160106720 chr1:160106720 synonymous SNV . 0 21 hPsi_associated_SNPs_103773 0 0 0 0 1 exosome 0 0.450490607635211 0.999687194824218 0 hPsi_site_2733 iPseU_CNN:0.999687194824218;iRNA_PseU:0 2734 chr12 119540084 119540084 1 + C A STAD 119540084 - 119540064 119540104 41 CTGACCCAGCTTTTCTGAGGGTCCATCCTGAGCTGGGACAA CTGACCCAGCTTTTCTGAGGTTCCATCCTGAGCTGGGACAA Direct Gain 0 0.961824262494575 0 0.992912530899048 prediction 0.923648524989149 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119540084 chr12:119540084 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_103774 0 0 0 0 0 Endoplasmic reticulum 0 0.438718836925429 0.985825061798096 0 hPsi_site_2734 iPseU_CNN:0.985825061798096;iRNA_PseU:0 2735 chr10 96495130 96495130 1 + G A SKCM 96495130 - 96495110 96495150 41 ATTGGCAATGGGGGTGATGTCAATATCCTTTGGGTCAACCT ATTGGCAATGGGGGTGATGTTAATATCCTTTGGGTCAACCT Direct Gain 0 0.961817825850724 0 0.0199105143547058 prediction 0.923635651701448 Functional Gain - CYP2C18 ENSG00000108242 CDS Human protein_coding chr10:96495130 chr10:96495130 nonsynonymous SNV 0.090 0 21 hPsi_associated_SNPs_103775 0 0 0 0 0 exosome 0 0.438775112330599 0 0 hPsi_site_2735 iPseU_CNN:0;iRNA_PseU:0 2736 chr9 34569677 34569677 1 + C A rs202128698 34569677 - 34569657 34569697 41 AAAAGCCACATCTGACCTGGGTCATGTCCCACTGCCCTGAC AAAAGCCACATCTGACCTGGTTCATGTCCCACTGCCCTGAC Direct Gain 0 0.961802328813124 0 0.117966592311859 prediction 0.923604657626248 Functional Gain - CNTFR-AS1 ENSG00000237159 ncRNA_exonic Human antisense chr9:34569677 chr9:34569677 . . 0 21 hPsi_associated_SNPs_103776 0 0 0 0 0 unknown 0 0.438718530071622 0 0 hPsi_site_2736 iPseU_CNN:0;iRNA_PseU:0 2737 chr2 43969899 43969899 1 + G A UCEC 43969899 - 43969879 43969919 41 ACAACGCTGGCAGTAAATGGCATATTTTCCAAATTCTGTCC ACAACGCTGGCAGTAAATGGTATATTTTCCAAATTCTGTCC Direct Gain 0 0.961802319869385 0 0.999997615814209 prediction 0.923604639738771 Functional Gain - PLEKHH2 ENSG00000152527 CDS Human protein_coding chr2:43969899 chr2:43969899 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_103777 0 0 0 0 0 Ribosome 0 0.438718621963013 0.999995231628418 0 hPsi_site_2737 iPseU_CNN:0.999995231628418;iRNA_PseU:0 2738 chr2 113742533 113742533 1 + C T BLCA 113742533 + 113742513 113742553 41 GTGGCCTTCCCGGACTGGTTCATTGCCTCCTCCAAGAGAGA GTGGCCTTCCCGGACTGGTTTATTGCCTCCTCCAAGAGAGA Direct Gain 0 0.961799230703356 0 0.327690422534943 prediction 0.923598461406712 Functional Gain - IL36G ENSG00000136688 CDS Human protein_coding chr2:113742533 chr2:113742533 synonymous SNV . 0 21 hPsi_associated_SNPs_103778 0 0 0 0 0 exosome 0 0.438718600302923 0 0 hPsi_site_2738 iPseU_CNN:0;iRNA_PseU:0 2739 chr19 15760928 15760928 1 + G A BLCA 15760928 - 15760908 15760948 41 GGCCTTGGCTTGGAGGAAGTCATCAACACCCTGGCTAGGGA GGCCTTGGCTTGGAGGAAGTTATCAACACCCTGGCTAGGGA Direct Gain 0 0.961783895425759 0 0.999903798103333 prediction 0.923567790851519 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15760928 chr19:15760928 nonsynonymous SNV 0.021 1 21 hPsi_associated_SNPs_103779 0 0 0 0 0 exosome 0 0.438718601703577 0.999807596206666 0 hPsi_site_2739 iPseU_CNN:0.999807596206666;iRNA_PseU:0 2740 chr11 60561459 60561459 1 + G T LUAD 60561459 + 60561439 60561479 41 CTATAGAAGATGTTGTGCCTGATGACAAACCTCATCAGCCT CTATAGAAGATGTTGTGCCTTATGACAAACCTCATCAGCCT Direct Gain 0 0.961782647114172 0 0.671089291572571 prediction 0.923565294228343 Functional Gain - MS4A10 ENSG00000172689 CDS Human protein_coding chr11:60561459 chr11:60561459 synonymous SNV . 0 21 hPsi_associated_SNPs_103780 0 0 0 0 1 Nucleus 0 0.438718528637128 0.342178583145142 0 hPsi_site_2740 iPseU_CNN:0.342178583145142;iRNA_PseU:0 2741 chr2 158115248 158115248 1 + G A BRCA 158115248 - 158115228 158115268 41 TCAGTACTAAGACTGATGGTCACATTCAAGTCCCTTTCAGC TCAGTACTAAGACTGATGGTTACATTCAAGTCCCTTTCAGC Direct Gain 0 0.961777374703518 0 1 prediction 0.923554749407036 Functional Gain - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158115248 chr2:158115248 synonymous SNV . 0 21 hPsi_associated_SNPs_103781 0 0 0 0 0 Exosome 0 0.438956093724205 1 0 hPsi_site_2741 iPseU_CNN:1;iRNA_PseU:0 2742 chr15 33954712 33954712 1 + C T UCEC 33954712 + 33954692 33954732 41 GGGTGGGCCTGAGAACATGTCTCAAGCCCGGGTTCAGGTTC GGGTGGGCCTGAGAACATGTTTCAAGCCCGGGTTCAGGTTC Direct Gain 0 0.961769806556525 0 0.999751687049866 prediction 0.92353961311305 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:33954712 chr15:33954712 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_103782 0 0 0 0 0 exosome 0 0.438745408536836 0.999503374099732 0 hPsi_site_2742 iPseU_CNN:0.999503374099732;iRNA_PseU:0 2743 chr22 19752605 19752605 1 + T A UCEC 19752605 - 19752585 19752625 41 GGTAGGCAGTGACCGCGGTGAATCGTGTCTCCTCGAACACA GGTAGGCAGTGACCGCGGTGTATCGTGTCTCCTCGAACACA Direct Gain 0 0.961769411181697 0 0.999976634979248 prediction 0.923538822363395 Functional Gain - TBX1 ENSG00000184058 CDS Human protein_coding chr22:19752605 chr22:19752605 nonsynonymous SNV 0.361 5 21 hPsi_associated_SNPs_103783 0 0 0 0 0 chromatin 0 0.438718718332988 0.999953269958496 0 hPsi_site_2743 iPseU_CNN:0.999953269958496;iRNA_PseU:0 2744 chr8 48352938 48352938 1 + G A UCEC 48352938 - 48352918 48352958 41 ACACATGGCAACTTGCATGGCACATTCCTCATGCAGCTCTA ACACATGGCAACTTGCATGGTACATTCCTCATGCAGCTCTA Direct Gain 0 0.96176676825209 0 0.999852001667023 prediction 0.923533536504179 Functional Gain - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48352938 chr8:48352938 nonsynonymous SNV 0.107 0 21 hPsi_associated_SNPs_103784 0 0 0 0 0 Ribosome 0 0.438639131849188 0.999704003334046 0 hPsi_site_2744 iPseU_CNN:0.999704003334046;iRNA_PseU:0 2745 chr9 130164873 130164873 1 + C T UCEC 130164873 + 130164853 130164893 41 CGCTGGCTGGCTGTGCTGGGCTGCGTGCCCCCCTCCCTCAT CGCTGGCTGGCTGTGCTGGGTTGCGTGCCCCCCTCCCTCAT Direct Gain 0 0.961755290514876 0 0.941068410873413 prediction 0.923510581029752 Functional Gain - SLC2A8 ENSG00000136856 CDS Human protein_coding chr9:130164873 chr9:130164873 synonymous SNV . 0 21 hPsi_associated_SNPs_103785 0 0 1 0 1 Endoplasmic reticulum 0 0.438665964877265 0.882136821746826 0 hPsi_site_2745 iPseU_CNN:0.882136821746826;iRNA_PseU:0 2746 chr7 140373454 140373454 1 + G A BLCA 140373454 - 140373434 140373474 41 AGTAGGAGGGGGAAGAATTTCACCAACAGAGCGCCGGCGCG AGTAGGAGGGGGAAGAATTTTACCAACAGAGCGCCGGCGCG Direct Gain 0 0.961753533879058 0 0.999704599380493 prediction 0.923507067758117 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373454 chr7:140373454 synonymous SNV . 0 21 hPsi_associated_SNPs_103786 0 0 0 0 0 Ribosome 0 0.438718507844904 0.999409198760986 0 hPsi_site_2746 iPseU_CNN:0.999409198760986;iRNA_PseU:0 2747 chr3 47037075 47037075 1 + C T LUSC 47037075 + 47037055 47037095 41 TCTGCACCCTATGGATACAGCACCTACCCCTGCCCCCACCC TCTGCACCCTATGGATACAGTACCTACCCCTGCCCCCACCC Direct Gain 0 0.961749211025711 0 0.996940314769745 prediction 0.923498422051423 Functional Gain - NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47037075 chr3:47037075 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103787 0 0 1 0 0 Nucleus 0 0.43868096134088 0.99388062953949 0 hPsi_site_2747 iPseU_CNN:0.99388062953949;iRNA_PseU:0 2748 chr19 4910993 4910993 1 + C A BLCA 4910993 - 4910973 4911013 41 TCCACGTGGAACAGCTCCTGGATCTTCCGCCTCAGCTCCTC TCCACGTGGAACAGCTCCTGTATCTTCCGCCTCAGCTCCTC Direct Gain 0 0.961745510096078 0 0.999997019767761 prediction 0.923491020192157 Functional Gain - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4910993 chr19:4910993 . . 0 21 hPsi_associated_SNPs_103788 0 0 0 0 0 chromatin 0 0.438718591591977 0.999994039535522 0 hPsi_site_2748 iPseU_CNN:0.999994039535522;iRNA_PseU:0 2749 chrX 153041443 153041443 1 + G A UCEC 153041443 - 153041423 153041463 41 CGCAGCAAGCGGCTATCATTCAGGGTCCGTTTGGCCTTGCC CGCAGCAAGCGGCTATCATTTAGGGTCCGTTTGGCCTTGCC Direct Gain 0 0.961743837759224 0 0.999429941177368 prediction 0.923487675518447 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153041443 chrX:153041443 synonymous SNV . 0 21 hPsi_associated_SNPs_103789 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593953778 0.998859882354736 0 hPsi_site_2749 iPseU_CNN:0.998859882354736;iRNA_PseU:0 2750 chr1 144619399 144619399 1 + G A rs4067645 144619399 - 144619379 144619419 41 CTGGGGGCAGATGATTTCTGCACTTTCTCATCCTCCTCAAC CTGGGGGCAGATGATTTCTGTACTTTCTCATCCTCCTCAAC Direct Gain 0 0.961741211415972 0 0.999621868133545 prediction 0.923482422831944 Functional Gain - NBPF8;NBPF9 ENSG00000225241 ncRNA_exonic Human other chr1:144619399 chr1:144619399 . . 0 21 hPsi_associated_SNPs_103790 0 0 0 0 0 unknown 0 0.43637341489896 0.99924373626709 0 hPsi_site_2750 iPseU_CNN:0.99924373626709;iRNA_PseU:0 2751 chr11 65734993 65734993 1 + G A OV 65734993 - 65734973 65735013 41 GGCAGGGGCTGAGGCACAGGCTCCTTCTCCTCCTCCACTTC GGCAGGGGCTGAGGCACAGGTTCCTTCTCCTCCTCCACTTC Direct Gain 0 0.961735131602342 0 0.999963104724884 prediction 0.923470263204684 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65734993 chr11:65734993 synonymous SNV . 0 21 hPsi_associated_SNPs_103791 0 0 0 0 0 Cytosol 0 0.438718592995104 0.999926209449768 0 hPsi_site_2751 iPseU_CNN:0.999926209449768;iRNA_PseU:0 2752 chr12 50490683 50490683 1 + C T LUAD 50490683 + 50490663 50490703 41 CTGAAGACTCAGCGGGAGTTCATGCTGAGCTTTGCCAGAGA CTGAAGACTCAGCGGGAGTTTATGCTGAGCTTTGCCAGAGA Direct Gain 0 0.961709898134469 0 0.999963939189911 prediction 0.923419796268938 Functional Gain - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50490683 chr12:50490683 synonymous SNV . 0 21 hPsi_associated_SNPs_103792 0 0 1 0 2 Cytosol 0 0.438716108640475 0.999927878379822 0 hPsi_site_2752 iPseU_CNN:0.999927878379822;iRNA_PseU:0 2753 chr7 141734133 141734133 1 + G A UCEC 141734133 - 141734113 141734153 41 GCCATACAGATTGTGAATGTCATACTGCTTGCCCCAGTGCT GCCATACAGATTGTGAATGTTATACTGCTTGCCCCAGTGCT Direct Gain 0 0.961707314502288 0 0.868699908256531 prediction 0.923414629004575 Functional Gain - MGAM ENSG00000257335 CDS Human protein_coding chr7:141734133 chr7:141734133 nonsynonymous SNV 0.983 3 21 hPsi_associated_SNPs_103793 0 0 0 0 0 Cytosol 0 0.438724829204381 0.737399816513062 0 hPsi_site_2753 iPseU_CNN:0.737399816513062;iRNA_PseU:0 2754 chr18 31318525 31318525 1 + C T SKCM 31318525 + 31318505 31318545 41 TGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTC TGGAGCTCAAAGTAGTTCTTTATGTGGGACTTCTGGCCTTC Direct Gain 0 0.96170421613223 0 0.975848793983459 prediction 0.92340843226446 Functional Gain - ASXL3 ENSG00000141431 CDS Human protein_coding chr18:31318525 chr18:31318525 nonsynonymous SNV 0.580 0 21 hPsi_associated_SNPs_103794 0 0 0 0 1 exosome 0 0.438718302787187 0.951697587966918 0 hPsi_site_2754 iPseU_CNN:0.951697587966918;iRNA_PseU:0 2755 chr22 24659791 24659791 1 + G T COAD 24659791 + 24659771 24659811 41 GCTTGGGCCATAACACAGGAGACCTGCTCCCTATCTGCGCA GCTTGGGCCATAACACAGGATACCTGCTCCCTATCTGCGCA Direct Gain 0 0.961686293262547 0 0.995103716850281 prediction 0.923372586525094 Functional Gain - POM121L9P ENSG00000128262 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:24659791 chr22:24659791 . . 0 21 hPsi_associated_SNPs_103795 0 0 0 0 0 unknown 0 0.438718567971436 0.990207433700562 0 hPsi_site_2755 iPseU_CNN:0.990207433700562;iRNA_PseU:0 2756 chr14 29261125 29261125 1 + C T COAD 29261125 + 29261105 29261145 41 ACAGTGAAGGCTGGCATGATCATCAGCTTCCCATCCAATAA ACAGTGAAGGCTGGCATGATTATCAGCTTCCCATCCAATAA Direct Gain 0 0.961686085478693 0 0.196714848279953 prediction 0.923372170957387 Functional Gain - LINC01551 ENSG00000186960 CDS Human lincRNA chr14:29261125 chr14:29261125 synonymous SNV . 0 21 hPsi_associated_SNPs_103796 0 0 0 0 1 unknown 0 0.438715076700504 0 0 hPsi_site_2756 iPseU_CNN:0;iRNA_PseU:0 2757 chr18 61654354 61654354 1 + G A SKCM 61654354 - 61654334 61654374 41 GGCAGCCTCTGTGCCTTCCTCATTGACCTCCACGAAGCACT GGCAGCCTCTGTGCCTTCCTTATTGACCTCCACGAAGCACT Direct Gain 0 0.961682954896201 0 0.997276425361633 prediction 0.923365909792402 Functional Gain - SERPINB8 ENSG00000166401 CDS Human protein_coding chr18:61654354 chr18:61654354 nonsynonymous SNV 0.947 5 21 hPsi_associated_SNPs_103797 0 0 0 0 0 nucleus 0 0.438718772890462 0.994552850723266 0 hPsi_site_2757 iPseU_CNN:0.994552850723266;iRNA_PseU:0 2758 chr19 38937368 38937368 1 + C T UCEC 38937368 + 38937348 38937388 41 AGGGGGGAGCTGTGTGCACTCATGCCCGCTCCCTCTGGAGG AGGGGGGAGCTGTGTGCACTTATGCCCGCTCCCTCTGGAGG Direct Gain 0 0.961681101090847 0 0.999991536140442 prediction 0.923362202181695 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:38937368 chr19:38937368 nonsynonymous SNV 0.631 3 21 hPsi_associated_SNPs_103798 0 0 1 0 2 chromatin 0 0.437873761281596 0.999983072280884 0 hPsi_site_2758 iPseU_CNN:0.999983072280884;iRNA_PseU:0 2759 chr19 56538763 56538763 1 + C T COAD 56538763 + 56538743 56538783 41 GCTGAGAAGCAGCCTCCGTTCACCCTCATACGCAGTCTGCT GCTGAGAAGCAGCCTCCGTTTACCCTCATACGCAGTCTGCT Direct Gain 0 0.961669909419149 0 0.999071836471558 prediction 0.923339818838297 Functional Gain - NLRP5 ENSG00000171487 CDS Human protein_coding chr19:56538763 chr19:56538763 synonymous SNV . 0 21 hPsi_associated_SNPs_103799 0 0 0 0 0 unknown 0 0.438719592270647 0.998143672943116 0 hPsi_site_2759 iPseU_CNN:0.998143672943116;iRNA_PseU:0 2760 chr6 31940134 31940134 1 + C T SKCM 31940134 + 31940114 31940154 41 GCGCCGGAAGACCCTATTTTCAGGTTCTCTTCCCTCCATTC GCGCCGGAAGACCCTATTTTTAGGTTCTCTTCCCTCCATTC Direct Gain 0 0.961662215343972 0 0.999968111515045 prediction 0.923324430687944 Functional Gain - STK19 ENSG00000204344 CDS Human protein_coding chr6:31940134 chr6:31940134 synonymous SNV . 0 21 hPsi_associated_SNPs_103800 0 0 1 0 0 chromatin 0 0.438718499238549 0.99993622303009 0 hPsi_site_2760 iPseU_CNN:0.99993622303009;iRNA_PseU:0 2761 chr15 97328277 97328277 1 + C T LUSC 97328277 + 97328257 97328297 41 GGTTCAAAGGCGAAGGGTGCCATCTGCTTCCCCACTGATTC GGTTCAAAGGCGAAGGGTGCTATCTGCTTCCCCACTGATTC Direct Gain 0 0.961642561765899 0 0.995148777961731 prediction 0.923285123531798 Functional Gain - SPATA8 ENSG00000185594 CDS Human protein_coding chr15:97328277 chr15:97328277 nonsynonymous SNV 0.008 1 21 hPsi_associated_SNPs_103801 0 0 0 0 1 exosome 0 0.438718592996732 0.990297555923462 0 hPsi_site_2761 iPseU_CNN:0.990297555923462;iRNA_PseU:0 2762 chr19 15728927 15728927 1 + C T LUSC 15728927 + 15728907 15728947 41 ATCAACTTGTGCCACCCTGACATCGTCCGATCTGTCATCAA ATCAACTTGTGCCACCCTGATATCGTCCGATCTGTCATCAA Direct Gain 0 0.961639035584477 0 0.99991250038147 prediction 0.923278071168953 Functional Gain - CYP4F8 ENSG00000186526 ncRNA_exonic Human protein_coding chr19:15728927 chr19:15728927 . . 0 21 hPsi_associated_SNPs_103802 0 0 0 0 1 unknown 0 0.438650891164231 0.99982500076294 0 hPsi_site_2762 iPseU_CNN:0.99982500076294;iRNA_PseU:0 2763 chr18 31318484 31318484 1 + C T rs117356074 31318484 + 31318464 31318504 41 AGAGAGGAATCTGTGAAGCTCACTACTGGACCAAACAACGC AGAGAGGAATCTGTGAAGCTTACTACTGGACCAAACAACGC Direct Gain 0 0.961634521674129 0 0.999733209609985 prediction 0.923269043348258 Functional Gain - ASXL3 ENSG00000141431 CDS Human protein_coding chr18:31318484 chr18:31318484 synonymous SNV . 0 21 hPsi_associated_SNPs_103803 0 0 0 0 1 exosome 0 0.43880216966645 0.99946641921997 0 hPsi_site_2763 iPseU_CNN:0.99946641921997;iRNA_PseU:0 2764 chr6 55196536 55196536 1 + G A SKCM 55196536 - 55196516 55196556 41 ATTGGTTTGGGAAGTGTATTCATTTTCCAAGCTTAACCCCA ATTGGTTTGGGAAGTGTATTTATTTTCCAAGCTTAACCCCA Direct Gain 0 0.961631774321838 0 0.999460220336914 prediction 0.923263548643676 Functional Gain - GFRAL ENSG00000187871 CDS Human protein_coding chr6:55196536 chr6:55196536 nonsynonymous SNV 0.827 0 21 hPsi_associated_SNPs_103804 0 0 0 0 0 Nucleus 0 0.438720037405531 0.998920440673828 0 hPsi_site_2764 iPseU_CNN:0.998920440673828;iRNA_PseU:0 2765 chr10 20105786 20105786 1 + T A rs74119748 20105786 - 20105766 20105806 41 ACCTCTGAGGCTCTCTTTGCAACTTGCCACACTCGCAGCCC ACCTCTGAGGCTCTCTTTGCTACTTGCCACACTCGCAGCCC Direct Gain 0 0.961628440360709 0 0.996817827224731 prediction 0.923256880721419 Functional Gain - PLXDC2 ENSG00000120594 UTR5 Human protein_coding chr10:20105786 chr10:20105786 . . 0 21 hPsi_associated_SNPs_103805 0 0 0 0 0 Nucleus 0 0.438699760954421 0.993635654449462 0 hPsi_site_2765 iPseU_CNN:0.993635654449462;iRNA_PseU:0 2766 chr22 37271902 37271902 1 + C T LUAD 37271902 + 37271882 37271922 41 TGCCCCTCACATCACCTTCTCATGGGTCCCTCTCCCACTCC TGCCCCTCACATCACCTTCTTATGGGTCCCTCTCCCACTCC Direct Gain 0 0.96162516079392 0 0.994043469429016 prediction 0.92325032158784 Functional Gain - NCF4 ENSG00000100365 CDS Human protein_coding chr22:37271902 chr22:37271902 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_103806 0 0 0 0 0 exosome 0 0.438718592995102 0.988086938858032 0 hPsi_site_2766 iPseU_CNN:0.988086938858032;iRNA_PseU:0 2767 chr9 125377328 125377328 1 + C T SKCM 125377328 + 125377308 125377348 41 TTAGCCCAAACTTATTTCTTCATTTGCTTCGCCGTCATGGA TTAGCCCAAACTTATTTCTTTATTTGCTTCGCCGTCATGGA Direct Gain 0 0.961620652097315 0 0.992942988872528 prediction 0.923241304194629 Functional Gain - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377328 chr9:125377328 synonymous SNV . 0 21 hPsi_associated_SNPs_103807 0 0 0 0 0 unknown 0 0.438259864077722 0.985885977745056 0 hPsi_site_2767 iPseU_CNN:0.985885977745056;iRNA_PseU:0 2768 chr10 26936164 26936164 1 + G A rs114612884 26936164 - 26936144 26936184 41 TTCACGCAATGTCTGGGATTCATAAAACCCCCTTTCCCCCA TTCACGCAATGTCTGGGATTTATAAAACCCCCTTTCCCCCA Direct Gain 0 0.961610608815926 0 0.998378753662109 prediction 0.923221217631852 Functional Gain - FAM238B ENSG00000231976 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:26936164 chr10:26936164 . . 0 21 hPsi_associated_SNPs_103808 0 0 0 0 0 unknown 0 0.438718592995102 0.996757507324218 0 hPsi_site_2768 iPseU_CNN:0.996757507324218;iRNA_PseU:0 2769 chr21 45740082 45740082 1 + C T rs375310320 45740082 + 45740062 45740102 41 GAACGGGCTCAGTTATTCTGCAGCCTCTTCACGCTGGCCCC GAACGGGCTCAGTTATTCTGTAGCCTCTTCACGCTGGCCCC Direct Gain 0 0.961607180346381 0 1 prediction 0.923214360692763 Functional Gain - PFKL ENSG00000141959 intronic Human protein_coding chr21:45740082 chr21:45740082 . . 0 21 hPsi_associated_SNPs_103809 0 0 0 0 0 Ribosome 0 0.438575247422655 1 0 hPsi_site_2769 iPseU_CNN:1;iRNA_PseU:0 2770 chr11 62186570 62186570 1 + G T UCEC 62186570 + 62186550 62186590 41 GCATCCCCCTCCTCCACCATGAAACTCGCTGTCACCCTCAC GCATCCCCCTCCTCCACCATTAAACTCGCTGTCACCCTCAC Direct Gain 0 0.961606446630596 0 0.999781966209412 prediction 0.923212893261191 Functional Gain - SCGB1A1 ENSG00000149021 CDS Human protein_coding chr11:62186570 chr11:62186570 nonsynonymous SNV 0.093 4 21 hPsi_associated_SNPs_103810 0 0 0 0 1 exosome 0 0.438671430782432 0.999563932418824 0 hPsi_site_2770 iPseU_CNN:0.999563932418824;iRNA_PseU:0 2771 chr22 35719878 35719878 1 + G T THYM 35719878 + 35719858 35719898 41 CCCCGCCCATACTCTCCGGTGACACGCCCATAGCACCAACC CCCCGCCCATACTCTCCGGTTACACGCCCATAGCACCAACC Direct Gain 0 0.961592885092159 0 0.999999284744263 prediction 0.923185770184318 Functional Gain - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719878 chr22:35719878 nonsynonymous SNV 0.070 2 21 hPsi_associated_SNPs_103811 0 0 1 0 1 Cytosol 0 0.438204222023606 0.999998569488526 0 hPsi_site_2771 iPseU_CNN:0.999998569488526;iRNA_PseU:0 2772 chr17 65548441 65548441 1 + A T rs533656475 65548441 + 65548421 65548461 41 GACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAG GACAGAGAAGGCTTGGAACTTTTATCCCTACACAATTACAG Direct Gain 0 0.961584063561362 0 0.966641545295715 prediction 0.923168127122723 Functional Gain - PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65548441 chr17:65548441 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103812 0 0 1 0 2 Cytosol 0 0.438583407671349 0.93328309059143 0 hPsi_site_2772 iPseU_CNN:0.93328309059143;iRNA_PseU:0 2773 chr11 56756882 56756882 1 + C T SKCM 56756882 + 56756862 56756902 41 ACAAACAGGTTTTACATGTTCACTGTCCTTCTGCAAGTCCA ACAAACAGGTTTTACATGTTTACTGTCCTTCTGCAAGTCCA Direct Gain 0 0.961583821635515 0 0.800133943557739 prediction 0.923167643271031 Functional Gain - OR5AK2 ENSG00000181273 CDS Human protein_coding chr11:56756882 chr11:56756882 nonsynonymous SNV 0.634 0 21 hPsi_associated_SNPs_103813 0 0 0 0 0 unknown 0 0.438407862501205 0.600267887115478 0 hPsi_site_2773 iPseU_CNN:0.600267887115478;iRNA_PseU:0 2774 chrX 23018477 23018477 1 + G A SKCM 23018477 - 23018457 23018497 41 GCCGCTTTGGCCTTTGCTTTCATTTCCCTATTGCCAAAAAT GCCGCTTTGGCCTTTGCTTTTATTTCCCTATTGCCAAAAAT Direct Gain 0 0.961580924883169 0 0.850490629673004 prediction 0.923161849766338 Functional Gain - DDX53 ENSG00000184735 CDS Human protein_coding chrX:23018477 chrX:23018477 nonsynonymous SNV 0.109 0 21 hPsi_associated_SNPs_103814 0 0 0 0 0 unknown 0 0.438717501688543 0.700981259346008 0 hPsi_site_2774 iPseU_CNN:0.700981259346008;iRNA_PseU:0 2775 chr11 74716778 74716778 1 + C A LIHC 74716778 - 74716758 74716798 41 ATGTAGTAGGTATACGCAGGGATGACCAGTCTCCCTGACTG ATGTAGTAGGTATACGCAGGTATGACCAGTCTCCCTGACTG Direct Gain 0 0.961580840228096 0 0.999786257743835 prediction 0.923161680456191 Functional Gain - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74716778 chr11:74716778 synonymous SNV . 0 21 hPsi_associated_SNPs_103815 0 0 0 0 0 Nucleus 0 0.438719409833378 0.99957251548767 0 hPsi_site_2775 iPseU_CNN:0.99957251548767;iRNA_PseU:0 2776 chr11 60696153 60696153 1 + C T BLCA 60696153 + 60696133 60696173 41 GCTTCCCTCGCACTGGTTCTCACAGGCCTCCACCACACGGG GCTTCCCTCGCACTGGTTCTTACAGGCCTCCACCACACGGG Direct Gain 0 0.961570294266422 0 0.999982118606567 prediction 0.923140588532844 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696153 chr11:60696153 nonsynonymous SNV 0.576 1 21 hPsi_associated_SNPs_103816 0 0 1 0 1 Ribosome 0 0.438718593134708 0.999964237213134 0 hPsi_site_2776 iPseU_CNN:0.999964237213134;iRNA_PseU:0 2777 chr10 5791054 5791054 1 + G A STAD 5791054 - 5791034 5791074 41 TGCCCGGGAGGGAGGCTCGTCTCCATGCCTGGAACCCAGCT TGCCCGGGAGGGAGGCTCGTTTCCATGCCTGGAACCCAGCT Direct Gain 0 0.961566923924568 0 1 prediction 0.923133847849136 Functional Gain - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5791054 chr10:5791054 synonymous SNV . 0 21 hPsi_associated_SNPs_103817 0 0 0 0 0 Nucleus 0 0.438718590483024 1 0 hPsi_site_2777 iPseU_CNN:1;iRNA_PseU:0 2778 chr3 141161281 141161281 1 + C T UCEC 141161281 + 141161261 141161301 41 AAGGACGACTTTCACAGTGACACGGTACTCTCCATCTTAAA AAGGACGACTTTCACAGTGATACGGTACTCTCCATCTTAAA Direct Gain 0 0.961564320964294 0 0.999621868133545 prediction 0.923128641928588 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161281 chr3:141161281 synonymous SNV . 0 21 hPsi_associated_SNPs_103818 0 0 1 0 0 chromatin 0 0.438718593445315 0.99924373626709 0 hPsi_site_2778 iPseU_CNN:0.99924373626709;iRNA_PseU:0 2779 chr1 87170606 87170606 1 + G A rs150324653 87170606 - 87170586 87170626 41 GCGTCGGCCGCCAGCTTCTTCACGTTGAAGTCCATGATATT GCGTCGGCCGCCAGCTTCTTTACGTTGAAGTCCATGATATT Direct Gain 0 0.961562667725527 0 0.999996602535248 prediction 0.923125335451054 Functional Gain - SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87170606 chr1:87170606 synonymous SNV . 0 21 hPsi_associated_SNPs_103819 0 0 0 0 0 Ribosome 0 0.438717878714009 0.999993205070496 0 hPsi_site_2779 iPseU_CNN:0.999993205070496;iRNA_PseU:0 2780 chr17 54543823 54543823 1 + C T SKCM 54543823 + 54543803 54543843 41 GGAGGTGGAGATGCTTTATTCATTTTTTAATGGCAAATGGA GGAGGTGGAGATGCTTTATTTATTTTTTAATGGCAAATGGA Direct Gain 0 0.961561363679561 0 0.350548923015594 prediction 0.923122727359122 Functional Gain - ANKFN1 ENSG00000153930 CDS Human protein_coding chr17:54543823 chr17:54543823 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103820 0 0 0 0 0 nucleus 0 0.438718597765002 0 0 hPsi_site_2780 iPseU_CNN:0;iRNA_PseU:0 2781 chr6 30879231 30879231 1 + G T READ 30879231 + 30879211 30879251 41 CGGGGCATGGACCTGGTAGAGATTCTCTCCTTCCTCTTCCA CGGGGCATGGACCTGGTAGATATTCTCTCCTTCCTCTTCCA Direct Gain 0 0.961550944120162 0 0.980840027332306 prediction 0.923101888240323 Functional Gain - GTF2H4 ENSG00000213780 CDS Human protein_coding chr6:30879231 chr6:30879231 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103821 0 0 1 0 2 chromatin 0 0.438718589608772 0.961680054664612 0 hPsi_site_2781 iPseU_CNN:0.961680054664612;iRNA_PseU:0 2782 chr2 220326623 220326623 1 + C T SKCM 220326623 + 220326603 220326643 41 GGTGGGTCTACATCCCCTTTCAGCAGCCCCATCACCTCCGA GGTGGGTCTACATCCCCTTTTAGCAGCCCCATCACCTCCGA Direct Gain 0 0.961550124986881 0 0.256495475769043 prediction 0.923100249973763 Functional Gain - SPEG ENSG00000072195 CDS Human protein_coding chr2:220326623 chr2:220326623 synonymous SNV . 0 21 hPsi_associated_SNPs_103822 0 0 0 0 1 Nucleus 0 0.43872093469894 0 0 hPsi_site_2782 iPseU_CNN:0;iRNA_PseU:0 2783 chr12 22211578 22211578 1 + G A LUAD 22211578 - 22211558 22211598 41 AAAATAAAATGAGCCATTTTCATATAATTCTCCATCCCAGT AAAATAAAATGAGCCATTTTTATATAATTCTCCATCCCAGT Direct Gain 0 0.96154574328837 0 0.943752884864807 prediction 0.92309148657674 Functional Gain - CMAS ENSG00000111726 CDS Human protein_coding chr12:22211578 chr12:22211578 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103823 0 0 0 0 0 Ribosome 0 0.438718602790157 0.887505769729614 0 hPsi_site_2783 iPseU_CNN:0.887505769729614;iRNA_PseU:0 2784 chrX 148797540 148797540 1 + G A UCEC 148797540 - 148797520 148797560 41 TGCACCCACCAGGCCCAGGTCTTCTTCTTGGGCCTGAAGGC TGCACCCACCAGGCCCAGGTTTTCTTCTTGGGCCTGAAGGC Direct Gain 0 0.961527622364268 0 0.460120141506195 prediction 0.923055244728536 Functional Gain - MAGEA11 ENSG00000185247 CDS Human protein_coding chrX:148797540 chrX:148797540 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103824 0 0 0 0 0 exosome 0 0.438718592995129 0 0 hPsi_site_2784 iPseU_CNN:0;iRNA_PseU:0 2785 chr4 8284198 8284198 1 + C T BLCA 8284198 + 8284178 8284218 41 AGCAGCCCGCGCTACAAGTTCAACTTCATTGCTGACGTGGT AGCAGCCCGCGCTACAAGTTTAACTTCATTGCTGACGTGGT Direct Gain 0 0.961517991078396 0 0.999787926673889 prediction 0.923035982156792 Functional Gain - HTRA3 ENSG00000170801 CDS Human protein_coding chr4:8284198 chr4:8284198 synonymous SNV . 0 21 hPsi_associated_SNPs_103825 0 0 0 0 2 exosome 0 0.438700445052915 0.999575853347778 0 hPsi_site_2785 iPseU_CNN:0.999575853347778;iRNA_PseU:0 2786 chr1 64645174 64645174 1 + A T rs544854609 64645174 + 64645154 64645194 41 GTAGAGTGTGCCTTTTTGTGAATCCTCCTCTGATCATGAGG GTAGAGTGTGCCTTTTTGTGTATCCTCCTCTGATCATGAGG Direct Gain 0 0.961511845355396 0 0.705877006053925 prediction 0.923023690710791 Functional Gain - ROR1 ENSG00000185483 UTR3 Human protein_coding chr1:64645174 chr1:64645174 . . 0 21 hPsi_associated_SNPs_103826 0 0 0 0 0 Nucleus 0 0.438717803357219 0.41175401210785 0 hPsi_site_2786 iPseU_CNN:0.41175401210785;iRNA_PseU:0 2787 chr1 228486408 228486408 1 + C T LGG 228486408 + 228486388 228486428 41 GAGAGGACCTCGGCCACGCTCACTGTCAGGGGTAAAGTCCA GAGAGGACCTCGGCCACGCTTACTGTCAGGGGTAAAGTCCA Direct Gain 0 0.961508279994164 0 0.974337697029114 prediction 0.923016559988328 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228486408 chr1:228486408 synonymous SNV . 0 21 hPsi_associated_SNPs_103827 0 0 0 0 1 Ribosome 0 0.437981497423519 0.948675394058228 0 hPsi_site_2787 iPseU_CNN:0.948675394058228;iRNA_PseU:0 2788 chr1 109771018 109771018 1 + G A OV 109771018 - 109770998 109771038 41 GTAAGGTCATCGAAACTCAGCACATTCTCTGGGACAGACTC GTAAGGTCATCGAAACTCAGTACATTCTCTGGGACAGACTC Direct Gain 0 0.961507774699734 0 0.999590516090393 prediction 0.923015549399469 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109771018 chr1:109771018 synonymous SNV . 0 21 hPsi_associated_SNPs_103828 0 0 0 0 0 Ribosome 0 0.442163270531989 0.999181032180786 0 hPsi_site_2788 iPseU_CNN:0.999181032180786;iRNA_PseU:0 2789 chr4 156632014 156632014 1 + G A OV 156632014 - 156631994 156632034 41 GCAGGGAGGCATTAACGACACTTCCACTTCCGTTTCATATA GCAGGGAGGCATTAACGACATTTCCACTTCCGTTTCATATA Direct Gain 0 0.961504180223423 0 0.995295643806458 prediction 0.923008360446846 Functional Gain - GUCY1A3 ENSG00000164116 CDS Human protein_coding chr4:156632014 chr4:156632014 nonsynonymous SNV 0.151 4 21 hPsi_associated_SNPs_103829 0 0 0 0 0 exosome 0 0.438833706455965 0.990591287612916 0 hPsi_site_2789 iPseU_CNN:0.990591287612916;iRNA_PseU:0 2790 chr3 58106996 58106996 1 + C T BLCA 58106996 + 58106976 58107016 41 GTTGGGAAGGATCAGGAGTTCACCGTTGATACCAGGGGGGC GTTGGGAAGGATCAGGAGTTTACCGTTGATACCAGGGGGGC Direct Gain 0 0.961492004542141 0 0.991181254386902 prediction 0.922984009084282 Functional Gain - FLNB ENSG00000136068 CDS Human protein_coding chr3:58106996 chr3:58106996 synonymous SNV . 0 21 hPsi_associated_SNPs_103830 0 0 1 0 1 Cytosol 0 0.438718593005151 0.982362508773804 0 hPsi_site_2790 iPseU_CNN:0.982362508773804;iRNA_PseU:0 2791 chr17 48646258 48646258 1 + C T ESCA 48646258 + 48646238 48646278 41 GAGCGCATCAGCATGTTGGTCATCCTTCTCAACTGCGTGAC GAGCGCATCAGCATGTTGGTTATCCTTCTCAACTGCGTGAC Direct Gain 0 0.961486675087321 0 0.965815663337708 prediction 0.922973350174642 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48646258 chr17:48646258 synonymous SNV . 0 21 hPsi_associated_SNPs_103831 0 0 0 0 1 exosome 0 0.436782946889941 0.931631326675416 0 hPsi_site_2791 iPseU_CNN:0.931631326675416;iRNA_PseU:0 2792 chr11 55563447 55563447 1 + C A LUSC 55563447 - 55563427 55563467 41 GCAGGGCACAGAGCCTCTGTGACATGGCCACTGTATAAAGC GCAGGGCACAGAGCCTCTGTTACATGGCCACTGTATAAAGC Direct Gain 0 0.96148206194957 0 0.999112248420715 prediction 0.922964123899141 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563447 chr11:55563447 stopgain 0.999 0 21 hPsi_associated_SNPs_103832 0 0 0 0 0 unknown 0 0.438718593176114 0.99822449684143 0 hPsi_site_2792 iPseU_CNN:0.99822449684143;iRNA_PseU:0 2793 chr13 32913155 32913155 1 + G T UCEC 32913155 + 32913135 32913175 41 AAAAAGAGCAAGGTACTAGTGAAATCACCAGTTTTAGCCAT AAAAAGAGCAAGGTACTAGTTAAATCACCAGTTTTAGCCAT Direct Gain 0 0.961477629181187 0 0.999969720840454 prediction 0.922955258362374 Functional Gain - BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32913155 chr13:32913155 stopgain 0.005 0 21 hPsi_associated_SNPs_103833 0 0 0 0 0 Nucleus 0 0.437586607912965 0.999939441680908 0 hPsi_site_2793 iPseU_CNN:0.999939441680908;iRNA_PseU:0 2794 chr1 147763309 147763309 1 + C A rs6701274 147763309 - 147763289 147763329 41 TGCCTGATTGCTTCAGCTGAGATATCAGCCTTTTCCTGCCT TGCCTGATTGCTTCAGCTGATATATCAGCCTTTTCCTGCCT Direct Gain 0 0.961465825108277 0 0.916340231895447 prediction 0.922931650216554 Functional Gain - NBPF19 ENSG00000231196 ncRNA_exonic Human other chr1:147763309 chr1:147763309 . . 0 21 hPsi_associated_SNPs_103834 0 0 0 0 0 exosome 0 0.438807535848757 0.832680463790894 0 hPsi_site_2794 iPseU_CNN:0.832680463790894;iRNA_PseU:0 2795 chr17 39240909 39240909 1 + G A COAD 39240909 - 39240889 39240929 41 GGCTCAGCAGCAAGAGGAGGCACAGCACAAGGGGCGGGGAC GGCTCAGCAGCAAGAGGAGGTACAGCACAAGGGGCGGGGAC Direct Gain 0 0.96145316233047 0 0.999882102012634 prediction 0.92290632466094 Functional Gain - KRTAP4-7 ENSG00000240871 CDS Human protein_coding chr17:39240909 chr17:39240909 nonsynonymous SNV 0.773 0 21 hPsi_associated_SNPs_103835 0 0 0 0 0 unknown 0 0.438705138756868 0.999764204025268 0 hPsi_site_2795 iPseU_CNN:0.999764204025268;iRNA_PseU:0 2796 chr12 50035727 50035727 1 + G A LGG 50035727 - 50035707 50035747 41 TATGACGTGGGCGAAGTCCTCAAAGGCCGTGTTCACCTCCA TATGACGTGGGCGAAGTCCTTAAAGGCCGTGTTCACCTCCA Direct Gain 0 0.961450876768941 0 0.830671787261963 prediction 0.922901753537882 Functional Gain - PRPF40B ENSG00000110844 CDS Human protein_coding chr12:50035727 chr12:50035727 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_103836 0 0 0 0 0 Cytosol 0 0.438718551485924 0.661343574523926 0 hPsi_site_2796 iPseU_CNN:0.661343574523926;iRNA_PseU:0 2797 chr7 149028274 149028274 1 + C T rs76862442 149028274 + 149028254 149028294 41 AGATCAAGAGGTCCCTGGTTCAAATCCAGGTGCCCCCTACT AGATCAAGAGGTCCCTGGTTTAAATCCAGGTGCCCCCTACT Direct Gain 0 0.961444138814271 0 1 prediction 0.922888277628543 Functional Gain - LOC155060;ZNF777 ENSG00000231397;ENSG00000215311 intergenic Human other chr7:149028274 chr7:149028274 . . 0 21 hPsi_associated_SNPs_103837 0 0 1 0 0 unknown 0 0.439269668289953 1 0 hPsi_site_2797 iPseU_CNN:1;iRNA_PseU:0 2798 chr10 101448459 101448459 1 + G A UCEC 101448459 - 101448439 101448479 41 AAAGTTGATTCCAATCCATGCATAAACCCCTAAGTAAGAAA AAAGTTGATTCCAATCCATGTATAAACCCCTAAGTAAGAAA Direct Gain 0 0.961442692995087 0 0.999936103820801 prediction 0.922885385990174 Functional Gain - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101448459 chr10:101448459 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103838 0 0 0 0 0 Endoplasmic reticulum 0 0.438719915602431 0.999872207641602 0 hPsi_site_2798 iPseU_CNN:0.999872207641602;iRNA_PseU:0 2799 chr6 153043227 153043227 1 + C A BLCA 153043227 - 153043207 153043247 41 AGAAGGGAGAGTCACCAGCTGACTCTCAGTTTCCACAGGAA AGAAGGGAGAGTCACCAGCTTACTCTCAGTTTCCACAGGAA Direct Gain 0 0.961418183520929 0 0.994935274124146 prediction 0.922836367041859 Functional Gain - MYCT1 ENSG00000120279 CDS Human protein_coding chr6:153043227 chr6:153043227 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_103839 0 0 0 0 0 Cytosol 0 0.438737615610371 0.989870548248292 0 hPsi_site_2799 iPseU_CNN:0.989870548248292;iRNA_PseU:0 2800 chr6 32134508 32134508 1 + G A OV 32134508 - 32134488 32134528 41 GTCTGCTGAACCTCCCGCCTCACCTCCCGCCACATAACGCG GTCTGCTGAACCTCCCGCCTTACCTCCCGCCACATAACGCG Direct Gain 0 0.961388393314984 0 0.922987341880798 prediction 0.922776786629968 Functional Gain - EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134508 chr6:32134508 synonymous SNV . 0 21 hPsi_associated_SNPs_103840 0 0 0 0 0 chromatin 0 0.438720490623964 0.845974683761596 0 hPsi_site_2800 iPseU_CNN:0.845974683761596;iRNA_PseU:0 2801 chr4 164272020 164272020 1 + G T COAD 164272020 + 164272000 164272040 41 TGAGCAGCAGGTATTTATGTGTTGAGTCATGGCCATCTGAT TGAGCAGCAGGTATTTATGTTTTGAGTCATGGCCATCTGAT Direct Gain 0 0.961388299473675 0 0.999946713447571 prediction 0.92277659894735 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272020 chr4:164272020 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_103841 0 0 0 0 0 unknown 0 0.438899282320319 0.999893426895142 0 hPsi_site_2801 iPseU_CNN:0.999893426895142;iRNA_PseU:0 2802 chr21 41033685 41033685 1 + C T rs531628024 41033685 + 41033665 41033705 41 CAGGGGTCAGTATCCTATGACATGATGGGTGTTACCATCCT CAGGGGTCAGTATCCTATGATATGATGGGTGTTACCATCCT Direct Gain 0 0.961386907128652 0 0.815684795379639 prediction 0.922773814257304 Functional Gain - B3GALT5 ENSG00000225330 ncRNA_intronic Human sense_overlapping chr21:41033685 chr21:41033685 . . 0 21 hPsi_associated_SNPs_103842 0 0 0 0 0 exosome 0 0.438717838644135 0.631369590759278 0 hPsi_site_2802 iPseU_CNN:0.631369590759278;iRNA_PseU:0 2803 chr19 55899664 55899664 1 + G A CESC 55899664 - 55899644 55899684 41 GGGCGGGTCCGCTTCCTCTTCACCATCACAGGCTTCTGGCT GGGCGGGTCCGCTTCCTCTTTACCATCACAGGCTTCTGGCT Direct Gain 0 0.961384694571379 0 0.995764374732971 prediction 0.922769389142759 Functional Gain - RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899664 chr19:55899664 synonymous SNV . 0 21 hPsi_associated_SNPs_103843 0 0 0 0 0 Cytosol 0 0.438718590461526 0.991528749465942 0 hPsi_site_2803 iPseU_CNN:0.991528749465942;iRNA_PseU:0 2804 chr11 71238612 71238612 1 + C T SKCM 71238612 + 71238592 71238632 41 TTCTAAGGGGGGCTGTGGTTCTTGTGGCTGCTCCCAGTGCA TTCTAAGGGGGGCTGTGGTTTTTGTGGCTGCTCCCAGTGCA Direct Gain 0 0.961382859473407 0 0.999438405036926 prediction 0.922765718946815 Functional Gain - KRTAP5-7 ENSG00000244411 CDS Human protein_coding chr11:71238612 chr11:71238612 nonsynonymous SNV 0.005 1 21 hPsi_associated_SNPs_103844 0 0 1 0 0 exosome 0 0.438718592995102 0.998876810073852 0 hPsi_site_2804 iPseU_CNN:0.998876810073852;iRNA_PseU:0 2805 chr2 158140813 158140813 1 + C T SKCM 158140813 + 158140793 158140833 41 GATGTGCAGAGCAGCTAGTTCACAATAACCTCCCAACCACC GATGTGCAGAGCAGCTAGTTTACAATAACCTCCCAACCACC Direct Gain 0 0.961381167381946 0 0.358860045671463 prediction 0.922762334763891 Functional Gain - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158140813 chr2:158140813 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103845 0 0 1 1 1 Exosome 0 0.438737906053639 0 0 hPsi_site_2805 iPseU_CNN:0;iRNA_PseU:0 2806 chr1 205549826 205549826 1 + G A COAD 205549826 - 205549806 205549846 41 AAGGGTCAGCAATAAGGGGGCTCAGCAGAGCACCAAAGCCC AAGGGTCAGCAATAAGGGGGTTCAGCAGAGCACCAAAGCCC Direct Gain 0 0.961380859290713 0 0.0710293054580688 prediction 0.922761718581426 Functional Gain - MFSD4A ENSG00000174514 CDS Human protein_coding chr1:205549826 chr1:205549826 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103846 0 0 0 0 0 Nucleus 0 0.438720784695488 0 0 hPsi_site_2806 iPseU_CNN:0;iRNA_PseU:0 2807 chr18 61442910 61442910 1 + G A rs17781440 61442910 - 61442890 61442930 41 AGCAGTGATGGGAATCTGGTCTCCTTTCTCTAGGTGATCTG AGCAGTGATGGGAATCTGGTTTCCTTTCTCTAGGTGATCTG Direct Gain 0 0.961379253626272 0 0.970980525016785 prediction 0.922758507252543 Functional Gain - SERPINB7 ENSG00000166396 UTR5 Human protein_coding chr18:61442910 chr18:61442910 . . 0 21 hPsi_associated_SNPs_103847 0 0 0 0 0 exosome 0 0.438654342067258 0.94196105003357 0 hPsi_site_2807 iPseU_CNN:0.94196105003357;iRNA_PseU:0 2808 chr7 152497698 152497698 1 + C T SKCM 152497698 + 152497678 152497718 41 GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGA GTTGATGACCTTGACTTTTTTATAGGAGATGAAGCCATCGA Direct Gain 0 0.961377358671924 0 0.871544361114502 prediction 0.922754717343847 Functional Gain - ACTR3B ENSG00000133627 CDS Human protein_coding chr7:152497698 chr7:152497698 synonymous SNV . 0 21 hPsi_associated_SNPs_103848 0 0 0 0 2 Ribosome 0 0.438718390211969 0.743088722229004 0 hPsi_site_2808 iPseU_CNN:0.743088722229004;iRNA_PseU:0 2809 chr7 19015511 19015511 1 + G A UCEC 19015511 - 19015491 19015531 41 GAGGCCAGGGCAGAAACGGTCTCTGTCTCCTCTTGCAACTG GAGGCCAGGGCAGAAACGGTTTCTGTCTCCTCTTGCAACTG Direct Gain 0 0.961373537794904 0 0.970934987068176 prediction 0.922747075589809 Functional Gain - HDAC9 ENSG00000048052 CDS Human protein_coding chr7:19015511 chr7:19015511 synonymous SNV . 0 21 hPsi_associated_SNPs_103849 0 0 0 0 0 Ribosome 0 0.438718619585621 0.941869974136352 0 hPsi_site_2809 iPseU_CNN:0.941869974136352;iRNA_PseU:0 2810 chr2 37028519 37028519 1 + T A LUAD 37028519 - 37028499 37028539 41 GAAAGTCCTCCTCTCTGAGTAATTTTCTCTATGGCTGTCTT GAAAGTCCTCCTCTCTGAGTTATTTTCTCTATGGCTGTCTT Direct Gain 0 0.961361146130872 0 0.993497550487518 prediction 0.922722292261744 Functional Gain - VIT ENSG00000205221 CDS Human protein_coding chr2:37028519 chr2:37028519 synonymous SNV . 0 21 hPsi_associated_SNPs_103850 0 0 0 0 0 Nucleus 0 0.438677991057248 0.986995100975036 0 hPsi_site_2810 iPseU_CNN:0.986995100975036;iRNA_PseU:0 2811 chr11 119029568 119029568 1 + G T LUAD 119029568 + 119029548 119029588 41 AGATGGCGGTCTTCATGAGGGAGCACCTCAACTACTGGTAC AGATGGCGGTCTTCATGAGGTAGCACCTCAACTACTGGTAC Direct Gain 0 0.961350478945307 0 0.88968551158905 prediction 0.922700957890614 Functional Gain - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119029568 chr11:119029568 stopgain 0.999 1 21 hPsi_associated_SNPs_103851 0 0 0 0 2 exosome 0 0.438725088523798 0.7793710231781 0 hPsi_site_2811 iPseU_CNN:0.7793710231781;iRNA_PseU:0 2812 chr16 10997631 10997631 1 + C T UCEC 10997631 + 10997611 10997651 41 GTACCCCCTCCCAGTGGATTCACTGTCCACGGCCTCCCAAC GTACCCCCTCCCAGTGGATTTACTGTCCACGGCCTCCCAAC Direct Gain 0 0.961350167534776 0 0.967409133911133 prediction 0.922700335069551 Functional Gain - CIITA ENSG00000179583 CDS Human protein_coding chr16:10997631 chr16:10997631 synonymous SNV . 0 21 hPsi_associated_SNPs_103852 0 0 0 0 1 Nucleus 0 0.438720758356352 0.934818267822266 0 hPsi_site_2812 iPseU_CNN:0.934818267822266;iRNA_PseU:0 2813 chr4 124323001 124323001 1 + G A rs6815848 124323001 - 124322981 124323021 41 CTGTGCTCGTAGTTATTATTCACATTAATTGGTATGATTTC CTGTGCTCGTAGTTATTATTTACATTAATTGGTATGATTTC Direct Gain 0 0.961346632715509 0 0.946266174316406 prediction 0.922693265431017 Functional Gain - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124323001 chr4:124323001 synonymous SNV . 0 21 hPsi_associated_SNPs_103853 0 0 0 0 0 nucleus 0 0.438719158712179 0.892532348632812 0 hPsi_site_2813 iPseU_CNN:0.892532348632812;iRNA_PseU:0 2814 chr11 1272726 1272726 1 + A T LGG 1272726 + 1272706 1272746 41 ACCGCCTCCTCCACTCTGGGAACAGCTCACACCCCCAAAGT ACCGCCTCCTCCACTCTGGGTACAGCTCACACCCCCAAAGT Direct Gain 0 0.961345129636113 0 0.999995350837708 prediction 0.922690259272227 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1272726 chr11:1272726 synonymous SNV . 0 21 hPsi_associated_SNPs_103854 0 0 0 0 0 Endoplasmic reticulum 0 0.438718173141771 0.999990701675416 0 hPsi_site_2814 iPseU_CNN:0.999990701675416;iRNA_PseU:0 2815 chr2 75185974 75185974 1 + G A rs142493904 75185974 - 75185954 75185994 41 GCTTCCTGTCCCGCTAGCGTCACGTCGGGATCTGCCTTCAC GCTTCCTGTCCCGCTAGCGTTACGTCGGGATCTGCCTTCAC Direct Gain 0 0.961340994457673 0 0.999996542930603 prediction 0.922681988915345 Functional Gain - POLE4 ENSG00000115350 CDS Human protein_coding chr2:75185974 chr2:75185974 synonymous SNV . 0 21 hPsi_associated_SNPs_103855 0 0 0 0 0 Ribosome 0 0.438721220079412 0.999993085861206 0 hPsi_site_2815 iPseU_CNN:0.999993085861206;iRNA_PseU:0 2816 chr15 89416180 89416180 1 + G T TGCT 89416180 + 89416160 89416200 41 GGAGAGGACTGTGTGGTGATGATCTGGCACGAGAAGGGCGA GGAGAGGACTGTGTGGTGATTATCTGGCACGAGAAGGGCGA Direct Gain 0 0.961334626898789 0 0.989100933074951 prediction 0.922669253797578 Functional Gain - ACAN ENSG00000157766 CDS Human protein_coding chr15:89416180 chr15:89416180 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103856 0 0 0 0 2 exosome 0 0.43871858232482 0.978201866149902 0 hPsi_site_2816 iPseU_CNN:0.978201866149902;iRNA_PseU:0 2817 chr22 39448090 39448090 1 + G A rs113109079 39448090 - 39448070 39448110 41 CTTTCTGCATGACAATGGGTCTCAGGATCCACCTGGGGAAG CTTTCTGCATGACAATGGGTTTCAGGATCCACCTGGGGAAG Direct Gain 0 0.961332517014589 0 0.99959659576416 prediction 0.922665034029178 Functional Gain - APOBEC3F ENSG00000128394 CDS Human protein_coding chr22:39448090 chr22:39448090 synonymous SNV . 0 21 hPsi_associated_SNPs_103857 0 0 0 0 0 Nucleus 0 0.438710065859277 0.99919319152832 0 hPsi_site_2817 iPseU_CNN:0.99919319152832;iRNA_PseU:0 2818 chr12 15702070 15702070 1 + C T LGG 15702070 + 15702050 15702090 41 ATGTCGTGACCATCTCCAGCCTTCTTCCTGCCACTGCCTAC ATGTCGTGACCATCTCCAGCTTTCTTCCTGCCACTGCCTAC Direct Gain 0 0.961329264002355 0 0.835140407085419 prediction 0.922658528004709 Functional Gain - PTPRO ENSG00000151490 CDS Human protein_coding chr12:15702070 chr12:15702070 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_103858 0 0 0 0 2 chromatin 0 0.438672651998832 0.670280814170838 0 hPsi_site_2818 iPseU_CNN:0.670280814170838;iRNA_PseU:0 2819 chr22 37318175 37318175 1 + C T rs117937233 37318175 + 37318155 37318195 41 AGGAACACAGGACTTCAGGACACTAAGGACCCTGTCATGCC AGGAACACAGGACTTCAGGATACTAAGGACCCTGTCATGCC Direct Gain 0 0.961328316960405 0 0.99996143579483 prediction 0.92265663392081 Functional Gain - CSF2RB ENSG00000100368 UTR5 Human protein_coding chr22:37318175 chr22:37318175 . . 0 21 hPsi_associated_SNPs_103859 0 0 0 0 0 Endoplasmic reticulum 0 0.438718601812402 0.99992287158966 0 hPsi_site_2819 iPseU_CNN:0.99992287158966;iRNA_PseU:0 2820 chr2 3428362 3428362 1 + G A LUAD 3428362 - 3428342 3428382 41 ATCAAGATTTCCGAAGGGTTCAAATTCCATCTCAGCATTCT ATCAAGATTTCCGAAGGGTTTAAATTCCATCTCAGCATTCT Direct Gain 0 0.961314598096083 0 0.958040297031403 prediction 0.922629196192166 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3428362 chr2:3428362 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103860 0 0 0 0 0 Ribosome 0 0.438718535677023 0.916080594062806 0 hPsi_site_2820 iPseU_CNN:0.916080594062806;iRNA_PseU:0 2821 chr11 125499319 125499319 1 + G T LUSC 125499319 + 125499299 125499339 41 GTATTGGAATAACTCACAGGGATATTAAACCAGAAAATCTT GTATTGGAATAACTCACAGGTATATTAAACCAGAAAATCTT Direct Gain 0 0.961312480905969 0 0.20038229227066 prediction 0.922624961811937 Functional Gain - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125499319 chr11:125499319 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_103861 0 0 1 2 2 Ribosome 0 0.43891215454472 0 0 hPsi_site_2821 iPseU_CNN:0;iRNA_PseU:0 2822 chr4 177036977 177036977 1 + C A COAD 177036977 - 177036957 177036997 41 ATGTTCAGACATAATTGCGTGAAGTTTGAATTCATTATAAC ATGTTCAGACATAATTGCGTTAAGTTTGAATTCATTATAAC Direct Gain 0 0.961312114025713 0 0.988939523696899 prediction 0.922624228051427 Functional Gain - WDR17 ENSG00000150627 CDS Human protein_coding chr4:177036977 chr4:177036977 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_103862 0 0 0 0 0 exosome 0 0.443962385571438 0.977879047393798 0 hPsi_site_2822 iPseU_CNN:0.977879047393798;iRNA_PseU:0 2823 chr3 108380784 108380784 1 + C T SKCM 108380784 + 108380764 108380804 41 AAAAGGAAAGGCTTGCTCGTCAAAGGCAGCTTTATAAATTG AAAAGGAAAGGCTTGCTCGTTAAAGGCAGCTTTATAAATTG Direct Gain 0 0.961309195988555 0 0.996912956237793 prediction 0.922618391977109 Functional Gain - DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108380784 chr3:108380784 stopgain 0.514 1 21 hPsi_associated_SNPs_103863 0 0 0 0 2 Ribosome 0 0.438585508632039 0.993825912475586 0 hPsi_site_2823 iPseU_CNN:0.993825912475586;iRNA_PseU:0 2824 chr21 22782720 22782720 1 + T A STAD 22782720 - 22782700 22782740 41 TGGTCGTGTTTTTAGCAGGTAAGACTAATTTATCTCTTCTC TGGTCGTGTTTTTAGCAGGTTAGACTAATTTATCTCTTCTC Direct Gain 0 0.961305241689972 0 0.357367157936096 prediction 0.922610483379944 Functional Gain - NCAM2 ENSG00000154654 CDS Human protein_coding chr21:22782720 chr21:22782720 stopgain 0.995 1 21 hPsi_associated_SNPs_103864 0 0 0 0 0 Cytosol 0 0.438718573617229 0 0 hPsi_site_2824 iPseU_CNN:0;iRNA_PseU:0 2825 chr11 47593082 47593082 1 + C A KIRC 47593082 - 47593062 47593102 41 AGCTGGCCAGGCCTGATGTGGATGTATGACCGGATCTTGGC AGCTGGCCAGGCCTGATGTGTATGTATGACCGGATCTTGGC Direct Gain 0 0.961301395477971 0 0.34948405623436 prediction 0.922602790955941 Functional Gain - PTPMT1 ENSG00000110536 CDS Human protein_coding chr11:47593082 chr11:47593082 nonsynonymous SNV 0.989 1 21 hPsi_associated_SNPs_103865 0 0 0 0 0 Ribosome 0 0.438729279519319 0 0 hPsi_site_2825 iPseU_CNN:0;iRNA_PseU:0 2826 chrX 43085367 43085367 1 + G T rs2410927 43085367 + 43085347 43085387 41 TGAGCTGCTCCTGGATATGTGAAACCCCTCAGTGACTGACC TGAGCTGCTCCTGGATATGTTAAACCCCTCAGTGACTGACC Direct Gain 0 0.961282044779647 0 0.999595165252686 prediction 0.922564089559294 Functional Gain - LOC101927501 ENSG00000224294 ncRNA_exonic Human lincRNA chrX:43085367 chrX:43085367 . . 0 21 hPsi_associated_SNPs_103866 0 0 1 0 0 unknown 0 0.438091062539118 0.999190330505372 0 hPsi_site_2826 iPseU_CNN:0.999190330505372;iRNA_PseU:0 2827 chr11 64977919 64977919 1 + G A UCEC 64977919 - 64977899 64977939 41 AGTTGGGGACACTCACGGAACATGGTCTCTAGCCGCACCAG AGTTGGGGACACTCACGGAATATGGTCTCTAGCCGCACCAG Direct Gain 0 0.961278512834756 0 0.993131816387177 prediction 0.922557025669512 Functional Gain - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64977919 chr11:64977919 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103867 0 0 0 0 0 Ribosome 0 0.438718452415927 0.986263632774354 0 hPsi_site_2827 iPseU_CNN:0.986263632774354;iRNA_PseU:0 2828 chr1 228682839 228682839 1 + G A rs140511611 228682839 - 228682819 228682859 41 ACGTCGGGGTGGAGCCCCATCTCCCCCCAGGCCCCAAGGAA ACGTCGGGGTGGAGCCCCATTTCCCCCCAGGCCCCAAGGAA Direct Gain 0 0.961274998754679 0 0.997877717018127 prediction 0.922549997509359 Functional Gain - RNF187 ENSG00000168159 UTR3 Human protein_coding chr1:228682839 chr1:228682839 . . 0 21 hPsi_associated_SNPs_103868 0 0 0 0 0 Ribosome 0 0.436846149294892 0.995755434036254 0 hPsi_site_2828 iPseU_CNN:0.995755434036254;iRNA_PseU:0 2829 chr2 190719442 190719442 1 + G A LUSC 190719442 - 190719422 190719462 41 TTCAAGACCTGCTTCTTCCTCATTTTCCCCACTCTCATCTA TTCAAGACCTGCTTCTTCCTTATTTTCCCCACTCTCATCTA Direct Gain 0 0.961272670041185 0 0.985197603702545 prediction 0.922545340082371 Functional Gain - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190719442 chr2:190719442 nonsynonymous SNV 0.135 1 21 hPsi_associated_SNPs_103869 0 0 0 0 0 Nucleus 0 0.438736822744079 0.97039520740509 0 hPsi_site_2829 iPseU_CNN:0.97039520740509;iRNA_PseU:0 2830 chr11 67815131 67815131 1 + C T SKCM 67815131 + 67815111 67815151 41 CAGATCTGGCAGACTTTCTTCAGGGGCCGCTACCTGCTCCT CAGATCTGGCAGACTTTCTTTAGGGGCCGCTACCTGCTCCT Direct Gain 0 0.961268965836695 0 0.99395751953125 prediction 0.92253793167339 Functional Gain - TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67815131 chr11:67815131 synonymous SNV . 0 21 hPsi_associated_SNPs_103870 0 0 1 0 0 Nucleus 0 0.438718643956366 0.9879150390625 0 hPsi_site_2830 iPseU_CNN:0.9879150390625;iRNA_PseU:0 2831 chr11 65340946 65340946 1 + C T BLCA 65340946 + 65340926 65340966 41 GAGCTTCTGCCAGGACCTGTCATCCTCCCTCCATTCGGACA GAGCTTCTGCCAGGACCTGTTATCCTCCCTCCATTCGGACA Direct Gain 0 0.961255619910892 0 0.99666965007782 prediction 0.922511239821785 Functional Gain - FAM89B ENSG00000173465;ENSG00000176973 CDS Human other chr11:65340946 chr11:65340946 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_103871 0 0 1 0 1 Cytosol 0 0.438717569095995 0.99333930015564 0 hPsi_site_2831 iPseU_CNN:0.99333930015564;iRNA_PseU:0 2832 chr1 16350339 16350339 1 + G A STAD 16350339 - 16350319 16350359 41 GGTCATCAGGAAGTACCAGTCTTCTCCCAGGCGGAACACCT GGTCATCAGGAAGTACCAGTTTTCTCCCAGGCGGAACACCT Direct Gain 0 0.9612471559664 0 0.990550637245178 prediction 0.9224943119328 Functional Gain - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16350339 chr1:16350339 nonsynonymous SNV 0.880 5 21 hPsi_associated_SNPs_103872 0 0 0 0 0 Endoplasmic reticulum 0 0.438694364008642 0.981101274490356 0 hPsi_site_2832 iPseU_CNN:0.981101274490356;iRNA_PseU:0 2833 chr3 127395158 127395158 1 + C T UCEC 127395158 + 127395138 127395178 41 GTGACGTGGTCTTTGTAGTACACGGGAAGCCATTCCGGGTG GTGACGTGGTCTTTGTAGTATACGGGAAGCCATTCCGGGTG Direct Gain 0 0.961231924754985 0 0.647088766098022 prediction 0.92246384950997 Functional Gain - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127395158 chr3:127395158 nonsynonymous SNV 0.261 3 21 hPsi_associated_SNPs_103873 0 0 1 0 1 exosome 0 0.438718614565109 0.294177532196044 0 hPsi_site_2833 iPseU_CNN:0.294177532196044;iRNA_PseU:0 2834 chr4 39482223 39482223 1 + C T SKCM 39482223 + 39482203 39482243 41 AAACTATGCTCTCTAAAGTTCACCCTTGCTGGCCACACCAA AAACTATGCTCTCTAAAGTTTACCCTTGCTGGCCACACCAA Direct Gain 0 0.961229311985122 0 0.885572910308838 prediction 0.922458623970244 Functional Gain - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482223 chr4:39482223 . . 0 21 hPsi_associated_SNPs_103874 0 0 0 0 0 unknown 0 0.438760018274324 0.771145820617676 0 hPsi_site_2834 iPseU_CNN:0.771145820617676;iRNA_PseU:0 2835 chr12 2800105 2800105 1 + C A UCEC 2800105 - 2800085 2800125 41 GGTGACCTCGATGAACTTGGGATCTTGAGCAAACTGCCCCA GGTGACCTCGATGAACTTGGTATCTTGAGCAAACTGCCCCA Direct Gain 0 0.961226543288901 0 0.999684989452362 prediction 0.922453086577803 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2800105 chr12:2800105 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_103875 0 0 0 0 1 Cytosol 0 0.438746706818242 0.999369978904724 0 hPsi_site_2835 iPseU_CNN:0.999369978904724;iRNA_PseU:0 2836 chr15 45560519 45560519 1 + C A LIHC 45560519 - 45560499 45560539 41 AGCCAGGAGAGGGCAGCATTGATGAAGGCCAACACAGCCAA AGCCAGGAGAGGGCAGCATTTATGAAGGCCAACACAGCCAA Direct Gain 0 0.961216466538781 0 0.999651432037354 prediction 0.922432933077562 Functional Gain - SLC28A2 ENSG00000137860 CDS Human protein_coding chr15:45560519 chr15:45560519 synonymous SNV . 0 21 hPsi_associated_SNPs_103876 0 0 0 0 0 Nucleus 0 0.438819761162765 0.999302864074708 0 hPsi_site_2836 iPseU_CNN:0.999302864074708;iRNA_PseU:0 2837 chr2 231090589 231090589 1 + G A BLCA 231090589 - 231090569 231090609 41 AGATTGCTGTCTCCACTTGCCATCTGCCCCTGCTGGCCCTG AGATTGCTGTCTCCACTTGCTATCTGCCCCTGCTGGCCCTG Direct Gain 0 0.96119197545697 0 0.745767176151276 prediction 0.92238395091394 Functional Gain - SP140 ENSG00000079263 CDS Human protein_coding chr2:231090589 chr2:231090589 nonsynonymous SNV 0.036 1 21 hPsi_associated_SNPs_103877 0 0 0 0 0 exosome 0 0.438719745942735 0.491534352302552 0 hPsi_site_2837 iPseU_CNN:0.491534352302552;iRNA_PseU:0 2838 chr9 104314050 104314050 1 + G A LIHC 104314050 - 104314030 104314070 41 AAATTCTATCCTCAGCATTTCATACTCCTTGCGGACCTGGG AAATTCTATCCTCAGCATTTTATACTCCTTGCGGACCTGGG Direct Gain 0 0.961189369987735 0 0.987594723701477 prediction 0.92237873997547 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104314050 chr9:104314050 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103878 0 0 0 0 0 nucleus 0 0.439330945837633 0.975189447402954 0 hPsi_site_2838 iPseU_CNN:0.975189447402954;iRNA_PseU:0 2839 chr1 16074229 16074229 1 + C T rs146322959 16074229 + 16074209 16074249 41 GGCAGAGTGGCAGAGCTGGCCTCCTGCCCAGAGCTCAGCAC GGCAGAGTGGCAGAGCTGGCTTCCTGCCCAGAGCTCAGCAC Direct Gain 0 0.961165964290874 0 0.664568960666656 prediction 0.922331928581748 Functional Gain - TMEM82 ENSG00000224459 ncRNA_intronic Human antisense chr1:16074229 chr1:16074229 . . 0 21 hPsi_associated_SNPs_103879 0 0 0 0 0 exosome 0 0.438709078268219 0.329137921333312 0 hPsi_site_2839 iPseU_CNN:0.329137921333312;iRNA_PseU:0 2840 chr12 52642426 52642426 1 + C A rs145798781 52642426 - 52642406 52642446 41 TGCCCATGGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCA TGCCCATGGTTCCCCCGAGGTTCAGCCCAATGCCACCGCCA Direct Gain 0 0.96116579044083 0 0.957636654376984 prediction 0.92233158088166 Functional Gain - KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642426 chr12:52642426 nonsynonymous SNV 0.199 1 21 hPsi_associated_SNPs_103880 0 0 0 0 0 Cytosol 0 0.43871838987011 0.915273308753968 0 hPsi_site_2840 iPseU_CNN:0.915273308753968;iRNA_PseU:0 2841 chr7 4050656 4050656 1 + G A LUSC 4050656 - 4050636 4050676 41 CGAGCCGGAGTCAGGCCACTCACGGTGACGCCTGTCATCTC CGAGCCGGAGTCAGGCCACTTACGGTGACGCCTGTCATCTC Direct Gain 0 0.961159432961824 0 0.999350249767303 prediction 0.922318865923648 Functional Gain - SDK1 ENSG00000146555 CDS Human protein_coding chr7:4050656 chr7:4050656 synonymous SNV . 0 21 hPsi_associated_SNPs_103881 0 0 0 0 0 cytosol 0 0.438683766026847 0.998700499534606 0 hPsi_site_2841 iPseU_CNN:0.998700499534606;iRNA_PseU:0 2842 chr2 204824313 204824313 1 + G A rs55655222 204824313 - 204824293 204824333 41 AGAGTTCCATATTATAGGGTCACATCTGTAACAAAAATTCA AGAGTTCCATATTATAGGGTTACATCTGTAACAAAAATTCA Direct Gain 0 0.96115850348006 0 0.996960401535034 prediction 0.92231700696012 Functional Gain - ICOS ENSG00000163600 CDS Human protein_coding chr2:204824313 chr2:204824313 synonymous SNV . 0 21 hPsi_associated_SNPs_103882 1 0 0 0 0 exosome 0 0.43871862200899 0.993920803070068 0 hPsi_site_2842 iPseU_CNN:0.993920803070068;iRNA_PseU:0 2843 chr21 18924160 18924160 1 + G T SKCM 18924160 + 18924140 18924180 41 GTAATGATCTCAAATCTGGTGATGCATCAATAAATGTAACG GTAATGATCTCAAATCTGGTTATGCATCAATAAATGTAACG Direct Gain 0 0.961151303395141 0 0.00173464417457581 prediction 0.922302606790282 Functional Gain - CXADR ENSG00000154639 CDS Human protein_coding chr21:18924160 chr21:18924160 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103883 0 0 1 0 1 Ribosome 0 0.438485761995037 0 0 hPsi_site_2843 iPseU_CNN:0;iRNA_PseU:0 2844 chr19 46843466 46843466 1 + G A rs562334958 46843466 - 46843446 46843486 41 GGCAGCTTGGGGTCTTTGGCCTCAATCGGAAGTCACTGGGG GGCAGCTTGGGGTCTTTGGCTTCAATCGGAAGTCACTGGGG Direct Gain 0 0.961141131289952 0 0.681472539901733 prediction 0.922282262579905 Functional Gain - HIF3A ENSG00000124440 UTR3 Human protein_coding chr19:46843466 chr19:46843466 . . 0 21 hPsi_associated_SNPs_103884 0 0 0 0 0 Nucleus 0 0.438718586245184 0.362945079803466 0 hPsi_site_2844 iPseU_CNN:0.362945079803466;iRNA_PseU:0 2845 chr7 77379112 77379112 1 + G A STAD 77379112 - 77379092 77379132 41 GTAGGCATGGATAACCGATGCACCTCCATTAGGCTGGTGCT GTAGGCATGGATAACCGATGTACCTCCATTAGGCTGGTGCT Direct Gain 0 0.961132372753279 0 0.130225747823715 prediction 0.922264745506558 Functional Gain - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77379112 chr7:77379112 nonsynonymous SNV 0.900 4 21 hPsi_associated_SNPs_103885 0 0 0 0 0 Cytosol 0 0.438718592995102 0 0 hPsi_site_2845 iPseU_CNN:0;iRNA_PseU:0 2846 chr7 150765066 150765066 1 + G A UCEC 150765066 - 150765046 150765086 41 GTGGGGCTTCCCCCAGCGCTCAGTCTCCTCCTCCACGTCCT GTGGGGCTTCCCCCAGCGCTTAGTCTCCTCCTCCACGTCCT Direct Gain 0 0.961126846792367 0 0.00171241164207458 prediction 0.922253693584733 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765066 chr7:150765066 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_103886 0 0 0 0 0 Ribosome 0 0.438718872751249 0 0 hPsi_site_2846 iPseU_CNN:0;iRNA_PseU:0 2847 chr11 61736104 61736104 1 + G A rs138403138 61736104 - 61736084 61736124 41 TGCCTGGGACTCAGCTTAGCCACACACACCGGCCCCACCCC TGCCTGGGACTCAGCTTAGCTACACACACCGGCCCCACCCC Direct Gain 0 0.961125379144102 0 0.980899810791016 prediction 0.922250758288204 Functional Gain - FTH1 ENSG00000269089 UTR3 Human other chr11:61736104 chr11:61736104 . . 0 21 hPsi_associated_SNPs_103887 0 0 0 0 0 Cytosol 0 0.438730926204537 0.961799621582032 0 hPsi_site_2847 iPseU_CNN:0.961799621582032;iRNA_PseU:0 2848 chr15 25440079 25440079 1 + G A SKCM 25440079 - 25440059 25440099 41 TTCAGACAATATAAGTTTCTCATCATCGACCCAACCCAGGG TTCAGACAATATAAGTTTCTTATCATCGACCCAACCCAGGG Direct Gain 0 0.96112373749166 0 0.990505576133728 prediction 0.922247474983321 Functional Gain - SNORD115-14 ENSG00000199960 ncRNA_exonic Human snoRNA chr15:25440079 chr15:25440079 . . 0 21 hPsi_associated_SNPs_103888 0 0 0 0 0 unknown 0 0.438719155440314 0.981011152267456 0 hPsi_site_2848 iPseU_CNN:0.981011152267456;iRNA_PseU:0 2849 chr4 30724721 30724721 1 + G T SKCM 30724721 + 30724701 30724741 41 AGGGTGGCCACGGTGCTGGCGACAGACGCAGACAGCGGTAA AGGGTGGCCACGGTGCTGGCTACAGACGCAGACAGCGGTAA Direct Gain 0 0.961119468602555 0 0.806194663047791 prediction 0.922238937205111 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724721 chr4:30724721 synonymous SNV . 0 21 hPsi_associated_SNPs_103889 0 0 0 0 0 Ribosome 0 0.437051794381813 0.612389326095582 0 hPsi_site_2849 iPseU_CNN:0.612389326095582;iRNA_PseU:0 2850 chr17 12891358 12891358 1 + C T rs577708213 12891358 + 12891338 12891378 41 GCACCAGGATATCTGGTGCTCACAGACAGGTCTCCTGGCGG GCACCAGGATATCTGGTGCTTACAGACAGGTCTCCTGGCGG Direct Gain 0 0.961114341920838 0 0.46927398443222 prediction 0.922228683841675 Functional Gain - ARHGAP44 ENSG00000006740 intronic Human protein_coding chr17:12891358 chr17:12891358 . . 0 21 hPsi_associated_SNPs_103890 0 0 0 0 0 Nucleus 0 0.438717909523278 0 0 hPsi_site_2850 iPseU_CNN:0;iRNA_PseU:0 2851 chr12 4467545 4467545 1 + A T rs576993240 4467545 + 4467525 4467565 41 GTATGTGCGTGTGTTTTGGTAATCTTTTATCTTGGATTTAT GTATGTGCGTGTGTTTTGGTTATCTTTTATCTTGGATTTAT Direct Gain 0 0.961112037931197 0 0.921502768993378 prediction 0.922224075862395 Functional Gain - TIGAR ENSG00000078237;ENSG00000118972 intergenic Human other chr12:4467545 chr12:4467545 . . 0 21 hPsi_associated_SNPs_103891 0 0 1 0 0 Nucleus 0 0.444924734309558 0.843005537986756 0 hPsi_site_2851 iPseU_CNN:0.843005537986756;iRNA_PseU:0 2852 chr10 12211295 12211295 1 + G A UCEC 12211295 - 12211275 12211315 41 GTATCCTTTTTGTAAAATGTCTTCCTTCTCCCTTCCACCTT GTATCCTTTTTGTAAAATGTTTTCCTTCTCCCTTCCACCTT Direct Gain 0 0.961090644099813 0 0.47692084312439 prediction 0.922181288199626 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12211295 chr10:12211295 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_103892 0 0 1 0 0 Ribosome 0 0.438718593024605 0 0 hPsi_site_2852 iPseU_CNN:0;iRNA_PseU:0 2853 chr10 43659419 43659419 1 + G T ACC 43659419 + 43659399 43659439 41 TGGGACAAGGGAGAGGTCTTGATGTTTTTCTGTGATGTTGA TGGGACAAGGGAGAGGTCTTTATGTTTTTCTGTGATGTTGA Direct Gain 0 0.961076322804578 0 0.175427436828613 prediction 0.922152645609156 Functional Gain - CSGALNACT2 ENSG00000169826 CDS Human protein_coding chr10:43659419 chr10:43659419 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103893 0 0 0 0 1 Endoplasmic reticulum 0 0.438718565325148 0 0 hPsi_site_2853 iPseU_CNN:0;iRNA_PseU:0 2854 chr16 90060245 90060245 1 + G A UCEC 90060245 - 90060225 90060265 41 CCAGGGTGTCCTTATTGAGGCTCTTGTCCAGCTTCAGTGGG CCAGGGTGTCCTTATTGAGGTTCTTGTCCAGCTTCAGTGGG Direct Gain 0 0.961074463094494 0 0.661454319953918 prediction 0.922148926188989 Functional Gain - AFG3L1P ENSG00000223959 ncRNA_exonic Human transcribed_unitary_pseudogene chr16:90060245 chr16:90060245 . . 0 21 hPsi_associated_SNPs_103894 0 0 0 0 0 unknown 0 0.438719103394259 0.322908639907836 0 hPsi_site_2854 iPseU_CNN:0.322908639907836;iRNA_PseU:0 2855 chr2 189849536 189849536 1 + G A rs79632685 189849536 - 189849516 189849556 41 GCATGGTTCTGGCTTCCAGACATCTCTATCCGCATAGGACT GCATGGTTCTGGCTTCCAGATATCTCTATCCGCATAGGACT Direct Gain 0 0.961065113473096 0 0.992707490921021 prediction 0.922130226946191 Functional Gain - COL3A1 ENSG00000168542 CDS Human protein_coding chr2:189849536 chr2:189849536 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_103895 3 0 0 0 0 Endoplasmic reticulum 0 0.438718592996613 0.985414981842042 0 hPsi_site_2855 iPseU_CNN:0.985414981842042;iRNA_PseU:0 2856 chr1 201982148 201982148 1 + C T COAD 201982148 + 201982128 201982168 41 GACCTGGATCCCACTGATGGCAAGCTCTTCCCCAGCGGTGA GACCTGGATCCCACTGATGGTAAGCTCTTCCCCAGCGGTGA Direct Gain 0 0.961043686804718 0 0.939908623695374 prediction 0.922087373609436 Functional Gain - ELF3 ENSG00000163435 CDS Human protein_coding chr1:201982148 chr1:201982148 synonymous SNV . 0 21 hPsi_associated_SNPs_103896 0 0 0 0 2 Endoplasmic reticulum 0 0.438728324737817 0.879817247390748 0 hPsi_site_2856 iPseU_CNN:0.879817247390748;iRNA_PseU:0 2857 chr11 1096506 1096506 1 + C T LUSC 1096506 + 1096486 1096526 41 GTGTCCTGTCCCCGCACCCTCATCGTGCGCCACGAGACCCA GTGTCCTGTCCCCGCACCCTTATCGTGCGCCACGAGACCCA Direct Gain 0 0.961034206939261 0 0.999283909797668 prediction 0.922068413878522 Functional Gain - MUC2 ENSG00000198788 CDS Human processed_transcript chr11:1096506 chr11:1096506 synonymous SNV . 0 21 hPsi_associated_SNPs_103897 0 0 0 0 1 Endoplasmic reticulum 0 0.438721597005957 0.998567819595336 0 hPsi_site_2857 iPseU_CNN:0.998567819595336;iRNA_PseU:0 2858 chr2 55747563 55747563 1 + G A UCEC 55747563 - 55747543 55747583 41 TCTGGGCTTCCTGGAGTTATCACATGCCCTCCTTTGCAGTT TCTGGGCTTCCTGGAGTTATTACATGCCCTCCTTTGCAGTT Direct Gain 0 0.961023236759679 0 0.962702631950378 prediction 0.922046473519358 Functional Gain - CFAP36 ENSG00000163001 CDS Human protein_coding chr2:55747563 chr2:55747563 synonymous SNV . 0 21 hPsi_associated_SNPs_103898 0 0 0 0 0 Ribosome 0 0.438718627709771 0.925405263900756 0 hPsi_site_2858 iPseU_CNN:0.925405263900756;iRNA_PseU:0 2859 chr5 139905961 139905961 1 + T A SARC 139905961 - 139905941 139905981 41 ATGAAGGAGCAGTGAGGGGTATTTAGAGGAATTCACATCCA ATGAAGGAGCAGTGAGGGGTTTTTAGAGGAATTCACATCCA Direct Gain 0 0.961022137950172 0 0.984828591346741 prediction 0.922044275900344 Functional Gain - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139905961 chr5:139905961 nonsynonymous SNV 0.328 0 21 hPsi_associated_SNPs_103899 0 0 0 0 0 unknown 0 0.441642866419349 0.969657182693482 0 hPsi_site_2859 iPseU_CNN:0.969657182693482;iRNA_PseU:0 2860 chr5 140581488 140581488 1 + G A UCEC 140581488 - 140581468 140581508 41 AGGCCGCCCTGCTCCTCCTGCACAGCCGCACCGCCACGAAC AGGCCGCCCTGCTCCTCCTGTACAGCCGCACCGCCACGAAC Direct Gain 0 0.961021630047952 0 0.999985218048096 prediction 0.922043260095904 Functional Gain - PCDHB11 ENSG00000197479 CDS Human protein_coding chr5:140581488 chr5:140581488 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_103900 0 0 0 0 0 Nucleus 0 0.438718550569436 0.999970436096192 0 hPsi_site_2860 iPseU_CNN:0.999970436096192;iRNA_PseU:0 2861 chr7 129311328 129311328 1 + C T SARC 129311328 + 129311308 129311348 41 GAAAGAAACGGAAACGGCCTCATGTATTTGAGTCTAATCCA GAAAGAAACGGAAACGGCCTTATGTATTTGAGTCTAATCCA Direct Gain 0 0.961012690916344 0 0.354322075843811 prediction 0.922025381832688 Functional Gain - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129311328 chr7:129311328 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103901 0 0 0 0 2 chromatin 0 0.44093142676411 0 0 hPsi_site_2861 iPseU_CNN:0;iRNA_PseU:0 2862 chr20 44687282 44687282 1 + C A rs113570388 44687282 - 44687262 44687302 41 ATGGGATACGGGGAGCAGGCGACAAGCCGACTGAGGAGAGA ATGGGATACGGGGAGCAGGCTACAAGCCGACTGAGGAGAGA Direct Gain 0 0.961009052625419 0 0.929716229438782 prediction 0.922018105250839 Functional Gain - SLC12A5 ENSG00000124140 UTR3 Human protein_coding chr20:44687282 chr20:44687282 . 1.000 0 21 hPsi_associated_SNPs_103902 0 0 0 0 0 cytosol 0 0.438718608090153 0.859432458877564 0 hPsi_site_2862 iPseU_CNN:0.859432458877564;iRNA_PseU:0 2863 chr6 53785469 53785469 1 + C A STAD 53785469 - 53785449 53785489 41 TCGTTCCAGGCTTCATCAGAGACATCATTTACCAAGTTCTC TCGTTCCAGGCTTCATCAGATACATCATTTACCAAGTTCTC Direct Gain 0 0.961003407040324 0 0.995064258575439 prediction 0.922006814080647 Functional Gain - LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53785469 chr6:53785469 synonymous SNV . 0 21 hPsi_associated_SNPs_103903 0 0 0 0 0 Ribosome 0 0.438407903738446 0.990128517150878 0 hPsi_site_2863 iPseU_CNN:0.990128517150878;iRNA_PseU:0 2864 chr19 56669916 56669916 1 + G A UCEC 56669916 - 56669896 56669936 41 GTGGCCCCAGGGCCCTGCGTCACATCCTGAGGCACCCTCGT GTGGCCCCAGGGCCCTGCGTTACATCCTGAGGCACCCTCGT Direct Gain 0 0.960998649716356 0 1 prediction 0.921997299432713 Functional Gain - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56669916 chr19:56669916 synonymous SNV . 0 21 hPsi_associated_SNPs_103904 0 0 0 0 0 Cytosol 0 0.438719507465735 1 0 hPsi_site_2864 iPseU_CNN:1;iRNA_PseU:0 2865 chr2 204000931 204000931 1 + G T UCEC 204000931 + 204000911 204000951 41 GAGAAAGCAGCATCACAAATGATATGGGCTTTAGTGATGAC GAGAAAGCAGCATCACAAATTATATGGGCTTTAGTGATGAC Direct Gain 0 0.960986266219497 0 0.99999588727951 prediction 0.921972532438994 Functional Gain - NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204000931 chr2:204000931 nonsynonymous SNV 0.987 1 21 hPsi_associated_SNPs_103905 0 0 0 0 1 chromatin 0 0.438463460299143 0.99999177455902 0 hPsi_site_2865 iPseU_CNN:0.99999177455902;iRNA_PseU:0 2866 chr7 33044873 33044873 1 + G A GBM 33044873 - 33044853 33044893 41 TTCCGGTCCTGGTTGGTGAACATATTCTTCACAATCAGCTC TTCCGGTCCTGGTTGGTGAATATATTCTTCACAATCAGCTC Direct Gain 0 0.960976509989441 0 0.998773396015167 prediction 0.921953019978881 Functional Gain - FKBP9 ENSG00000122642 CDS Human protein_coding chr7:33044873 chr7:33044873 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_103906 0 0 0 0 0 Ribosome 0 0.438718592926984 0.997546792030334 0 hPsi_site_2866 iPseU_CNN:0.997546792030334;iRNA_PseU:0 2867 chr11 64051853 64051853 1 + G A rs75052600 64051853 - 64051833 64051873 41 ACTACGTAACATCTTGTCCTCACAGCCCAGAGCATGTTCCA ACTACGTAACATCTTGTCCTTACAGCCCAGAGCATGTTCCA Direct Gain 0 0.960972380891828 0 0.988817989826202 prediction 0.921944761783657 Functional Gain - GPR137 ENSG00000173264 CDS Human protein_coding chr11:64051853 chr11:64051853 synonymous SNV . 0 21 hPsi_associated_SNPs_103907 0 0 0 0 0 Cytosol 0 0.438388739944363 0.977635979652404 0 hPsi_site_2867 iPseU_CNN:0.977635979652404;iRNA_PseU:0 2868 chr10 75549504 75549504 1 + C T UCEC 75549504 + 75549484 75549524 41 GTCTGCCTGCGAGCCCCAGTCTCAGAGTCCCTGTCCCGGCT GTCTGCCTGCGAGCCCCAGTTTCAGAGTCCCTGTCCCGGCT Direct Gain 0 0.960969308776956 0 0.999418318271637 prediction 0.921938617553912 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75549504 chr10:75549504 synonymous SNV . 0 21 hPsi_associated_SNPs_103908 0 0 1 0 2 Cytosol 0 0.438546488687255 0.998836636543274 0 hPsi_site_2868 iPseU_CNN:0.998836636543274;iRNA_PseU:0 2869 chrX 55650229 55650229 1 + G A GBM 55650229 - 55650209 55650249 41 GGTACAAGGCAGAAATAACTCATTCCTCATGTCCCAGTCCA GGTACAAGGCAGAAATAACTTATTCCTCATGTCCCAGTCCA Direct Gain 0 0.96096664535225 0 0.916218042373657 prediction 0.921933290704501 Functional Gain - FOXR2 ENSG00000189299 CDS Human protein_coding chrX:55650229 chrX:55650229 nonsynonymous SNV 0.785 2 21 hPsi_associated_SNPs_103909 0 0 0 0 0 unknown 0 0.438748832262147 0.832436084747314 0 hPsi_site_2869 iPseU_CNN:0.832436084747314;iRNA_PseU:0 2870 chr11 4608670 4608670 1 + G A STAD 4608670 - 4608650 4608690 41 CCTGGCCAAAGCTATGTGCTCACAGTAGGAGTGGACAACCA CCTGGCCAAAGCTATGTGCTTACAGTAGGAGTGGACAACCA Direct Gain 0 0.960966263601875 0 0.359313249588013 prediction 0.921932527203751 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608670 chr11:4608670 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_103910 0 0 0 0 0 unknown 0 0.43835566135606 0 0 hPsi_site_2870 iPseU_CNN:0;iRNA_PseU:0 2871 chr1 34677952 34677952 1 + G T UCEC 34677952 + 34677932 34677972 41 AGATGTCTGCCAACCCCCGAGACCCTCCCCTAATGGCAGGA AGATGTCTGCCAACCCCCGATACCCTCCCCTAATGGCAGGA Direct Gain 0 0.960957607105429 0 0.965092658996582 prediction 0.921915214210857 Functional Gain - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34677952 chr1:34677952 nonsynonymous SNV 0.904 4 21 hPsi_associated_SNPs_103911 0 0 0 0 1 unknown 0 0.438718593090647 0.930185317993164 0 hPsi_site_2871 iPseU_CNN:0.930185317993164;iRNA_PseU:0 2872 chr16 1838598 1838598 1 + G A CESC 1838598 - 1838578 1838618 41 TGGCCCTCCTCCAGGGTCCTCATGAGCGCAGGGTCCAGGGG TGGCCCTCCTCCAGGGTCCTTATGAGCGCAGGGTCCAGGGG Direct Gain 0 0.960953732476641 0 0.991470158100128 prediction 0.921907464953282 Functional Gain - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1838598 chr16:1838598 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_103912 0 0 0 0 0 Ribosome 0 0.438718592845819 0.982940316200256 0 hPsi_site_2872 iPseU_CNN:0.982940316200256;iRNA_PseU:0 2873 chr6 57015563 57015563 1 + G A BLCA 57015563 - 57015543 57015583 41 TCTACAAAGACTATATGAGTCATGGTTCGCAGGTAATCCAA TCTACAAAGACTATATGAGTTATGGTTCGCAGGTAATCCAA Direct Gain 0 0.960950458948768 0 0.999166548252106 prediction 0.921900917897535 Functional Gain - ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57015563 chr6:57015563 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103913 0 0 0 0 0 chromatin 0 0.438711570270355 0.998333096504212 0 hPsi_site_2873 iPseU_CNN:0.998333096504212;iRNA_PseU:0 2874 chr11 14666451 14666451 1 + G T BLCA 14666451 + 14666431 14666471 41 GGAAGCGCCTCTTCATCCTCGACTGTCCAGTGCCGCCGAAG GGAAGCGCCTCTTCATCCTCTACTGTCCAGTGCCGCCGAAG Direct Gain 0 0.960947023266533 0 0.983312427997589 prediction 0.921894046533066 Functional Gain - PDE3B ENSG00000152270 CDS Human protein_coding chr11:14666451 chr11:14666451 nonsynonymous SNV 0.006 1 21 hPsi_associated_SNPs_103914 0 0 1 0 0 chromatin 0 0.43871982557318 0.966624855995178 0 hPsi_site_2874 iPseU_CNN:0.966624855995178;iRNA_PseU:0 2875 chr16 15045872 15045872 1 + C A OV 15045872 - 15045852 15045892 41 TTATTCTTCCTTAGTTTCTTGAGATTATCATCCGCTGAGGG TTATTCTTCCTTAGTTTCTTTAGATTATCATCCGCTGAGGG Direct Gain 0 0.960939503985705 0 0.00375613570213318 prediction 0.92187900797141 Functional Gain - NPIPA1 ENSG00000183426 CDS Human protein_coding chr16:15045872 chr16:15045872 stopgain 0.002 0 21 hPsi_associated_SNPs_103915 0 0 0 0 0 exosome 0 0.438718608855331 0 0 hPsi_site_2875 iPseU_CNN:0;iRNA_PseU:0 2876 chr14 77709375 77709375 1 + C T LUSC 77709375 + 77709355 77709395 41 ACTATCGACATGTACAACGTCACCCGCCCCATCGAGAAGCT ACTATCGACATGTACAACGTTACCCGCCCCATCGAGAAGCT Direct Gain 0 0.960938982163626 0 0.999700307846069 prediction 0.921877964327252 Functional Gain - TMEM63C ENSG00000165548 CDS Human protein_coding chr14:77709375 chr14:77709375 synonymous SNV . 0 21 hPsi_associated_SNPs_103916 0 0 0 0 1 exosome 0 0.438272473923911 0.999400615692138 0 hPsi_site_2876 iPseU_CNN:0.999400615692138;iRNA_PseU:0 2877 chr8 106813924 106813924 1 + C T UCEC 106813924 + 106813904 106813944 41 AGTAGTAGCTACCCTCCCGTCATTTACAGCCCTTTGATGCC AGTAGTAGCTACCCTCCCGTTATTTACAGCCCTTTGATGCC Direct Gain 0 0.96093702144619 0 0.998599410057068 prediction 0.92187404289238 Functional Gain - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106813924 chr8:106813924 synonymous SNV . 0 21 hPsi_associated_SNPs_103917 0 0 0 0 0 chromatin 0 0.438718321937301 0.997198820114136 0 hPsi_site_2877 iPseU_CNN:0.997198820114136;iRNA_PseU:0 2878 chr10 28872388 28872388 1 + C T SKCM 28872388 + 28872368 28872408 41 TGCTCTTCATAGTTCAAATTCACATTCTTCTAATCCAAGCA TGCTCTTCATAGTTCAAATTTACATTCTTCTAATCCAAGCA Direct Gain 0 0.960930861871442 0 0.990782499313354 prediction 0.921861723742883 Functional Gain - WAC ENSG00000095787 CDS Human protein_coding chr10:28872388 chr10:28872388 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103918 0 0 1 0 2 Cytosol 0 0.438803675267787 0.981564998626708 0 hPsi_site_2878 iPseU_CNN:0.981564998626708;iRNA_PseU:0 2879 chr10 83635863 83635863 1 + C T LUAD 83635863 + 83635843 83635883 41 TGCTGCCTCCTCTTCTTCCTCTTCTTCCTCCTCCGCTACCA TGCTGCCTCCTCTTCTTCCTTTTCTTCCTCCTCCGCTACCA Direct Gain 0 0.960925655495489 0 0.997254371643066 prediction 0.921851310990977 Functional Gain - NRG3 ENSG00000185737 CDS Human protein_coding chr10:83635863 chr10:83635863 nonsynonymous SNV 0.401 1 21 hPsi_associated_SNPs_103919 0 0 0 0 1 nucleus 0 0.438718671620904 0.994508743286132 0 hPsi_site_2879 iPseU_CNN:0.994508743286132;iRNA_PseU:0 2880 chr19 39208629 39208629 1 + G A BLCA 39208629 - 39208609 39208649 41 TCCAGCCTGCGGATCTCATTCAGCAGCCACTCCTCGTAGCC TCCAGCCTGCGGATCTCATTTAGCAGCCACTCCTCGTAGCC Direct Gain 0 0.960920001052052 0 0.999965310096741 prediction 0.921840002104104 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39208629 chr19:39208629 synonymous SNV . 0 21 hPsi_associated_SNPs_103920 0 0 0 0 0 Nucleus 0 0.438740650876764 0.999930620193482 0 hPsi_site_2880 iPseU_CNN:0.999930620193482;iRNA_PseU:0 2881 chr11 55861032 55861032 1 + G T BLCA 55861032 + 55861012 55861052 41 GTAACACCTAAGGCATTGGTGAATTTCCAATCCAATCGGAG GTAACACCTAAGGCATTGGTTAATTTCCAATCCAATCGGAG Direct Gain 0 0.960919710525794 0 0.999998152256012 prediction 0.921839421051588 Functional Gain - OR8I2 ENSG00000172154 CDS Human protein_coding chr11:55861032 chr11:55861032 synonymous SNV . 0 21 hPsi_associated_SNPs_103921 0 0 0 0 0 unknown 0 0.438469862324101 0.999996304512024 0 hPsi_site_2881 iPseU_CNN:0.999996304512024;iRNA_PseU:0 2882 chr18 47117340 47117340 1 + C T rs41418147 47117340 + 47117320 47117360 41 CGACAGGAGCTGACTCATGTCAGGATGGCAGGCCTGGTATC CGACAGGAGCTGACTCATGTTAGGATGGCAGGCCTGGTATC Direct Gain 0 0.960919673708452 0 0.192551374435425 prediction 0.921839347416905 Functional Gain - LIPG ENSG00000101670 UTR3 Human protein_coding chr18:47117340 chr18:47117340 . . 0 21 hPsi_associated_SNPs_103922 0 0 0 0 0 Nucleus 0 0.438670882656769 0 0 hPsi_site_2882 iPseU_CNN:0;iRNA_PseU:0 2883 chr11 9462025 9462025 1 + G A HNSC 9462025 - 9462005 9462045 41 TTGCCCATCTTCATCAATATCATCTTCATCACTCCCCAGTT TTGCCCATCTTCATCAATATTATCTTCATCACTCCCCAGTT Direct Gain 0 0.960915818168183 0 0.913532614707947 prediction 0.921831636336365 Functional Gain - IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462025 chr11:9462025 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_103923 0 0 0 0 0 Cytosol 0 0.438718660899398 0.827065229415894 0 hPsi_site_2883 iPseU_CNN:0.827065229415894;iRNA_PseU:0 2884 chr1 53074041 53074041 1 + C A STAD 53074041 - 53074021 53074061 41 CACGAGCGCTGTGATCTGGGGTCTGACCTCCTCCACTGACA CACGAGCGCTGTGATCTGGGTTCTGACCTCCTCCACTGACA Direct Gain 0 0.960909225830348 0 0.99956077337265 prediction 0.921818451660697 Functional Gain - GPX7 ENSG00000116157 CDS Human protein_coding chr1:53074041 chr1:53074041 nonsynonymous SNV 0.583 2 21 hPsi_associated_SNPs_103924 0 0 0 0 0 exosome 0 0.438341026064046 0.9991215467453 0 hPsi_site_2884 iPseU_CNN:0.9991215467453;iRNA_PseU:0 2885 chr10 75673514 75673514 1 + C T COAD 75673514 + 75673494 75673534 41 ATCAGCGCCACACACTGCTTCATGTACGGCCCTGGGTTTCT ATCAGCGCCACACACTGCTTTATGTACGGCCCTGGGTTTCT Direct Gain 0 0.960898447689785 0 0.99091100692749 prediction 0.92179689537957 Functional Gain - PLAU ENSG00000122861 CDS Human protein_coding chr10:75673514 chr10:75673514 synonymous SNV . 0 21 hPsi_associated_SNPs_103925 0 0 0 0 1 Endoplasmic reticulum 0 0.438690133166152 0.98182201385498 0 hPsi_site_2885 iPseU_CNN:0.98182201385498;iRNA_PseU:0 2886 chr19 34900345 34900345 1 + C T SKCM 34900345 + 34900325 34900365 41 GGGACTTTGTCAACCTGGATCATGCCCACAGCCTTCTGAGG GGGACTTTGTCAACCTGGATTATGCCCACAGCCTTCTGAGG Direct Gain 0 0.96089812102917 0 0.99882972240448 prediction 0.921796242058341 Functional Gain - PDCD2L ENSG00000126249 CDS Human protein_coding chr19:34900345 chr19:34900345 nonsynonymous SNV 0.577 4 21 hPsi_associated_SNPs_103926 0 0 1 0 1 Ribosome 0 0.438717649983262 0.99765944480896 0 hPsi_site_2886 iPseU_CNN:0.99765944480896;iRNA_PseU:0 2887 chr15 33023353 33023353 1 + C A UCEC 33023353 - 33023333 33023373 41 AGTTCAGGGCAGTTGAGTGTGACCATCATGGTAGTGAATTT AGTTCAGGGCAGTTGAGTGTTACCATCATGGTAGTGAATTT Direct Gain 0 0.960895374037019 0 0.297308325767517 prediction 0.921790748074037 Functional Gain - GREM1 ENSG00000166923 CDS Human protein_coding chr15:33023353 chr15:33023353 synonymous SNV . 0 21 hPsi_associated_SNPs_103927 0 0 0 0 0 exosome 0 0.438718703720188 0 0 hPsi_site_2887 iPseU_CNN:0;iRNA_PseU:0 2888 chr1 6154485 6154485 1 + C A UCEC 6154485 - 6154465 6154505 41 ATGGCCATCCCCTGGTTGATGACGTGGGTCATGGCGCGGAC ATGGCCATCCCCTGGTTGATTACGTGGGTCATGGCGCGGAC Direct Gain 0 0.960889579613618 0 0.998389005661011 prediction 0.921779159227236 Functional Gain - KCNAB2 ENSG00000069424 CDS Human protein_coding chr1:6154485 chr1:6154485 synonymous SNV . 0 21 hPsi_associated_SNPs_103928 0 0 0 0 0 Ribosome 0 0.438446278886037 0.996778011322022 0 hPsi_site_2888 iPseU_CNN:0.996778011322022;iRNA_PseU:0 2889 chr7 53104367 53104367 1 + G A rs142935690 53104367 - 53104347 53104387 41 GACGAGGGGTGTGGGGGCTGCATGTTTGATAACGTGGTGTC GACGAGGGGTGTGGGGGCTGTATGTTTGATAACGTGGTGTC Direct Gain 0 0.960888234403488 0 0.999905526638031 prediction 0.921776468806975 Functional Gain - POM121L12 ENSG00000221900 UTR3 Human protein_coding chr7:53104367 chr7:53104367 . . 0 21 hPsi_associated_SNPs_103929 0 0 0 0 0 unknown 0 0.438718260045646 0.999811053276062 0 hPsi_site_2889 iPseU_CNN:0.999811053276062;iRNA_PseU:0 2890 chr12 55714785 55714785 1 + G A LUSC 55714785 - 55714765 55714805 41 AGTGTGCAGACTCTTCGATTCATGATACTCAAGCAATGCAG AGTGTGCAGACTCTTCGATTTATGATACTCAAGCAATGCAG Direct Gain 0 0.960879801554366 0 0.999532699584961 prediction 0.921759603108733 Functional Gain - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55714785 chr12:55714785 nonsynonymous SNV 0.111 3 21 hPsi_associated_SNPs_103930 0 0 0 0 0 unknown 0 0.439984721498994 0.999065399169922 0 hPsi_site_2890 iPseU_CNN:0.999065399169922;iRNA_PseU:0 2891 chr12 13061438 13061438 1 + C T rs141986396 13061438 + 13061418 13061458 41 TTTGGCCTCACCTTCGCCTTCATCATCGGACTGGACGGGAG TTTGGCCTCACCTTCGCCTTTATCATCGGACTGGACGGGAG Direct Gain 0 0.960842231527967 0 0.342490017414093 prediction 0.921684463055934 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061438 chr12:13061438 synonymous SNV . 0 21 hPsi_associated_SNPs_103931 0 0 1 0 0 Nucleus 0 0.438709680438978 0 0 hPsi_site_2891 iPseU_CNN:0;iRNA_PseU:0 2892 chr16 50140175 50140175 1 + C T rs78683670 50140175 + 50140155 50140195 41 TACTAATGAGCTAATGGGGTCATTGCCATCCTCCCTACTCA TACTAATGAGCTAATGGGGTTATTGCCATCCTCCCTACTCA Direct Gain 0 0.960837072865886 0 0.920623242855072 prediction 0.921674145731772 Functional Gain - HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50140175 chr16:50140175 . . 0 21 hPsi_associated_SNPs_103932 0 0 1 0 0 Ribosome 0 0.438718592995102 0.841246485710144 0 hPsi_site_2892 iPseU_CNN:0.841246485710144;iRNA_PseU:0 2893 chr16 55530868 55530868 1 + C A LUSC 55530868 - 55530848 55530888 41 AGCAGGGGCCCCATGGGCTTGTCACGTGGCGTCACAGTCCG AGCAGGGGCCCCATGGGCTTTTCACGTGGCGTCACAGTCCG Direct Gain 0 0.960829922450229 0 0.999405562877655 prediction 0.921659844900459 Functional Gain - MMP2 ENSG00000087245 CDS Human protein_coding chr16:55530868 chr16:55530868 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_103933 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859316633 0.99881112575531 0 hPsi_site_2893 iPseU_CNN:0.99881112575531;iRNA_PseU:0 2894 chr12 131471742 131471742 1 + C A UCEC 131471742 - 131471722 131471762 41 TGGACTCTCCATAGTCACGAGACACTTTTCCACTCGGATCA TGGACTCTCCATAGTCACGATACACTTTTCCACTCGGATCA Direct Gain 0 0.960828389252104 0 0.999845862388611 prediction 0.921656778504208 Functional Gain - ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131471742 chr12:131471742 nonsynonymous SNV 0.170 2 21 hPsi_associated_SNPs_103934 0 0 0 0 0 chromatin 0 0.444678477872732 0.999691724777222 0 hPsi_site_2894 iPseU_CNN:0.999691724777222;iRNA_PseU:0 2895 chr9 130578625 130578625 1 + G A rs41429144 130578625 - 130578605 130578645 41 CTCCCGAGCCTCAGTTTCCTCACGTTACCCCATCCATCCTC CTCCCGAGCCTCAGTTTCCTTACGTTACCCCATCCATCCTC Direct Gain 0 0.960828257989718 0 0.999987840652466 prediction 0.921656515979436 Functional Gain - LOC102723566 ENSG00000225032 ncRNA_exonic Human antisense chr9:130578625 chr9:130578625 . . 0 21 hPsi_associated_SNPs_103935 0 0 0 0 0 unknown 0 0.43871861692877 0.999975681304932 0 hPsi_site_2895 iPseU_CNN:0.999975681304932;iRNA_PseU:0 2896 chr1 170501292 170501292 1 + G A SKCM 170501292 - 170501272 170501312 41 GCCAACACTGCTGCCCAGCTCATCCGGGTTTTTCCCCGGCC GCCAACACTGCTGCCCAGCTTATCCGGGTTTTTCCCCGGCC Direct Gain 0 0.960823084950259 0 0.677655577659607 prediction 0.921646169900518 Functional Gain - GORAB ENSG00000120370 CDS Human protein_coding chr1:170501292 chr1:170501292 nonsynonymous SNV 0.608 1 21 hPsi_associated_SNPs_103936 0 0 0 0 0 Cytosol 0 0.438718592995108 0.355311155319214 0 hPsi_site_2896 iPseU_CNN:0.355311155319214;iRNA_PseU:0 2897 chr4 71346552 71346552 1 + C T CESC 71346552 + 71346532 71346572 41 AAAGGGATCATGAACTACGTCACAGAAGGCATCATCACCAA AAAGGGATCATGAACTACGTTACAGAAGGCATCATCACCAA Direct Gain 0 0.960818946160189 0 0.990506887435913 prediction 0.921637892320378 Functional Gain - MUC7 ENSG00000171195 CDS Human protein_coding chr4:71346552 chr4:71346552 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_103937 0 0 0 0 1 unknown 0 0.438642500094542 0.981013774871826 0 hPsi_site_2897 iPseU_CNN:0.981013774871826;iRNA_PseU:0 2898 chr11 55595327 55595327 1 + C T SKCM 55595327 + 55595307 55595347 41 TTGAATGAGAGTGTTACCATCATGATCATCCTCACCTCCTA TTGAATGAGAGTGTTACCATTATGATCATCCTCACCTCCTA Direct Gain 0 0.960809833071677 0 0.714649200439453 prediction 0.921619666143355 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595327 chr11:55595327 synonymous SNV . 0 21 hPsi_associated_SNPs_103938 0 0 0 0 0 unknown 0 0.439769910012175 0.429298400878906 0 hPsi_site_2898 iPseU_CNN:0.429298400878906;iRNA_PseU:0 2899 chr1 248616329 248616329 1 + C T BLCA 248616329 + 248616309 248616349 41 GATACCATCTACATCTGTATCACTGTCCCCAAGATGCTCCA GATACCATCTACATCTGTATTACTGTCCCCAAGATGCTCCA Direct Gain 0 0.960801663251045 0 0.973164200782776 prediction 0.92160332650209 Functional Gain - OR2T2 ENSG00000196240 CDS Human protein_coding chr1:248616329 chr1:248616329 synonymous SNV . 0 21 hPsi_associated_SNPs_103939 0 0 0 0 0 exosome 0 0.438741576368807 0.946328401565552 0 hPsi_site_2899 iPseU_CNN:0.946328401565552;iRNA_PseU:0 2900 chr11 11964077 11964077 1 + G A rs142548073 11964077 - 11964057 11964097 41 TACAGGTCCTTTGACTCTTTCACAGTCATCATCCACATTAC TACAGGTCCTTTGACTCTTTTACAGTCATCATCCACATTAC Direct Gain 0 0.960801139513776 0 0.601315557956696 prediction 0.921602279027551 Functional Gain - USP47 ENSG00000170242 CDS Human protein_coding chr11:11964077 chr11:11964077 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_103940 0 0 0 0 0 Nucleus 0 0.438718553286358 0.202631115913392 0 hPsi_site_2900 iPseU_CNN:0.202631115913392;iRNA_PseU:0 2901 chr2 26399236 26399236 1 + G A UCEC 26399236 - 26399216 26399256 41 GATGAGCAGGATGTCTCGCTCACTGACGCCCTCGGCGTACT GATGAGCAGGATGTCTCGCTTACTGACGCCCTCGGCGTACT Direct Gain 0 0.960794752365512 0 0.993628025054932 prediction 0.921589504731024 Functional Gain - GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26399236 chr2:26399236 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103941 0 0 0 0 0 Exosome 0 0.438719078000865 0.987256050109864 0 hPsi_site_2901 iPseU_CNN:0.987256050109864;iRNA_PseU:0 2902 chr5 90055394 90055394 1 + G A SKCM 90055394 - 90055374 90055414 41 TTAACTTACAGTCTTTTCTTCAAATCCAAATACTCCAAATG TTAACTTACAGTCTTTTCTTTAAATCCAAATACTCCAAATG Direct Gain 0 0.960793192336341 0 0.999935150146484 prediction 0.921586384672683 Functional Gain - ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90055394 chr5:90055394 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103942 0 0 0 0 0 Nucleus 0 0.439210999395675 0.999870300292968 0 hPsi_site_2902 iPseU_CNN:0.999870300292968;iRNA_PseU:0 2903 chr16 30387757 30387757 1 + G A LUAD 30387757 - 30387737 30387777 41 GCATCCAACTCCTCATTCTTCACATTGAGGCGGCCTGGAGG GCATCCAACTCCTCATTCTTTACATTGAGGCGGCCTGGAGG Direct Gain 0 0.960782901106925 0 0.999809801578522 prediction 0.92156580221385 Functional Gain - MYLPF ENSG00000180209 CDS Human protein_coding chr16:30387757 chr16:30387757 synonymous SNV . 0 21 hPsi_associated_SNPs_103943 0 0 0 0 0 exosome 0 0.438718593724766 0.999619603157044 0 hPsi_site_2903 iPseU_CNN:0.999619603157044;iRNA_PseU:0 2904 chr19 49963012 49963012 1 + G A KIRC 49963012 - 49962992 49963032 41 GGCCAGCTGGACGTCCCCGTCTCGAACCTCTCGAACAGCCC GGCCAGCTGGACGTCCCCGTTTCGAACCTCTCGAACAGCCC Direct Gain 0 0.960782880402754 0 0.998810231685638 prediction 0.921565760805509 Functional Gain - ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49963012 chr19:49963012 nonsynonymous SNV 0.831 1 21 hPsi_associated_SNPs_103944 0 0 0 0 0 Ribosome 0 0.438718583854908 0.997620463371276 0 hPsi_site_2904 iPseU_CNN:0.997620463371276;iRNA_PseU:0 2905 chr3 184647438 184647438 1 + G T SARC 184647438 + 184647418 184647458 41 TTATTGATTGCTACTTACGTGACCCTCTGCGAGAGGTGAGT TTATTGATTGCTACTTACGTTACCCTCTGCGAGAGGTGAGT Direct Gain 0 0.960777537867805 0 0.999996244907379 prediction 0.92155507573561 Functional Gain - VPS8 ENSG00000156931 CDS Human protein_coding chr3:184647438 chr3:184647438 nonsynonymous SNV 0.987 4 21 hPsi_associated_SNPs_103945 0 0 1 0 2 chromatin 0 0.438327819474319 0.999992489814758 0 hPsi_site_2905 iPseU_CNN:0.999992489814758;iRNA_PseU:0 2906 chr12 8926668 8926668 1 + G A rs757819079 8926668 - 8926648 8926688 41 AAAAAAAAGTATTTGTTCCTCATGGCCTATGAGCATACACA AAAAAAAAGTATTTGTTCCTTATGGCCTATGAGCATACACA Direct Gain 0 0.960773621723097 0 0.846157908439636 prediction 0.921547243446194 Functional Gain - RIMKLB ENSG00000166532 UTR3 Human protein_coding chr12:8926668 chr12:8926668 . . 0 21 hPsi_associated_SNPs_103946 0 0 0 0 0 chromatin 0 0.438717290673345 0.692315816879272 0 hPsi_site_2906 iPseU_CNN:0.692315816879272;iRNA_PseU:0 2907 chrX 153991070 153991070 1 + A T rs782519189 153991070 + 153991050 153991090 41 ACGACCAGCGGGCGCCTCGGATTCCGCCCCCGGGATGGCCC ACGACCAGCGGGCGCCTCGGTTTCCGCCCCCGGGATGGCCC Direct Gain 0 0.960756684382688 0 0.999815940856934 prediction 0.921513368765377 Functional Gain - DKC1 ENSG00000130826 UTR5 Human protein_coding chrX:153991070 chrX:153991070 . . 0 21 hPsi_associated_SNPs_103947 0 0 0 0 0 Cytosol 0 0.438718517954953 0.999631881713868 0 hPsi_site_2907 iPseU_CNN:0.999631881713868;iRNA_PseU:0 2908 chr15 81201620 81201620 1 + C T UCEC 81201620 + 81201600 81201640 41 CATACATTCTCTCGCTGCGTCACAGTCCATGGCTCCAATGG CATACATTCTCTCGCTGCGTTACAGTCCATGGCTCCAATGG Direct Gain 0 0.960752987246802 0 0.999990105628967 prediction 0.921505974493604 Functional Gain - CEMIP ENSG00000103888 CDS Human protein_coding chr15:81201620 chr15:81201620 synonymous SNV . 0 21 hPsi_associated_SNPs_103948 0 0 1 0 1 Nucleus 0 0.43871945821439 0.999980211257934 0 hPsi_site_2908 iPseU_CNN:0.999980211257934;iRNA_PseU:0 2909 chr18 29122596 29122596 1 + C T LUAD 29122596 + 29122576 29122616 41 AGTAGCTCTGCTTCCATTGTCAAAGGGCAACATGAGATGTC AGTAGCTCTGCTTCCATTGTTAAAGGGCAACATGAGATGTC Direct Gain 0 0.960752143825202 0 0.99985671043396 prediction 0.921504287650404 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29122596 chr18:29122596 synonymous SNV . 0 21 hPsi_associated_SNPs_103949 0 0 1 0 0 Endoplasmic reticulum 0 0.438725546679495 0.99971342086792 0 hPsi_site_2909 iPseU_CNN:0.99971342086792;iRNA_PseU:0 2910 chr12 62960168 62960168 1 + T A LAML 62960168 - 62960148 62960188 41 GTGACACGCTGTTTTTTGGTATAAATCCACAACTACTTCTA GTGACACGCTGTTTTTTGGTTTAAATCCACAACTACTTCTA Direct Gain 0 0.96074195673741 0 0.999986410140991 prediction 0.921483913474819 Functional Gain - MON2 ENSG00000061987 CDS Human protein_coding chr12:62960168 chr12:62960168 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_103950 0 0 0 0 0 Nucleus 0 0.438868253399797 0.999972820281982 0 hPsi_site_2910 iPseU_CNN:0.999972820281982;iRNA_PseU:0 2911 chr11 126163690 126163690 1 + C A rs8177377 126163690 - 126163670 126163710 41 GGTCACGAGCAAAGCGCTGTGACTCACTCCCTATACCTCTT GGTCACGAGCAAAGCGCTGTTACTCACTCCCTATACCTCTT Direct Gain 0 0.960741450254315 0 0.942439675331116 prediction 0.92148290050863 Functional Gain - TIRAP ENSG00000254905 ncRNA_intronic Human antisense chr11:126163690 chr11:126163690 . . 0 21 hPsi_associated_SNPs_103951 0 0 0 0 0 exosome 0 0.438718592255985 0.884879350662232 0 hPsi_site_2911 iPseU_CNN:0.884879350662232;iRNA_PseU:0 2912 chr14 64908132 64908132 1 + G A LIHC 64908132 - 64908112 64908152 41 TTGGGCTTGATTGCGTCCTTCATAAGCACTGTCAGTGCACC TTGGGCTTGATTGCGTCCTTTATAAGCACTGTCAGTGCACC Direct Gain 0 0.960738254540783 0 0.987823128700256 prediction 0.921476509081565 Functional Gain - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64908132 chr14:64908132 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_103952 0 0 0 0 0 Nucleus 0 0.438718592995214 0.975646257400512 0 hPsi_site_2912 iPseU_CNN:0.975646257400512;iRNA_PseU:0 2913 chr19 36606504 36606504 1 + C T BLCA 36606504 + 36606484 36606524 41 GCACCCACGGTGACCGTTTTCATCAGCAGCTCCCTCAACAC GCACCCACGGTGACCGTTTTTATCAGCAGCTCCCTCAACAC Direct Gain 0 0.960724759631169 0 0.000361710786819458 prediction 0.921449519262337 Functional Gain - TBCB ENSG00000105254 CDS Human protein_coding chr19:36606504 chr19:36606504 synonymous SNV . 0 21 hPsi_associated_SNPs_103953 0 0 1 0 1 Ribosome 0 0.438718185867818 0 0 hPsi_site_2913 iPseU_CNN:0;iRNA_PseU:0 2914 chr1 170508556 170508556 1 + C A UCEC 170508556 - 170508536 170508576 41 CCAACGGGGGAGGTGAGAGTGAAATGACTCGGAAGAGTAGG CCAACGGGGGAGGTGAGAGTTAAATGACTCGGAAGAGTAGG Direct Gain 0 0.960722519976538 0 0.999996781349182 prediction 0.921445039953076 Functional Gain - GORAB ENSG00000120370 CDS Human protein_coding chr1:170508556 chr1:170508556 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_103954 0 0 0 0 0 Cytosol 0 0.438718286318737 0.999993562698364 0 hPsi_site_2914 iPseU_CNN:0.999993562698364;iRNA_PseU:0 2915 chr9 18657675 18657675 1 + C T UCEC 18657675 + 18657655 18657695 41 GCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCAT GCTGACAGTACAGTCCAGTTTATCTTCTATCAACCCATCAT Direct Gain 0 0.960716343884368 0 0.00124219059944153 prediction 0.921432687768735 Functional Gain - ADAMTSL1 ENSG00000178031 CDS Human protein_coding chr9:18657675 chr9:18657675 synonymous SNV . 0 21 hPsi_associated_SNPs_103955 0 0 0 0 2 Nucleus 0 0.438708695269911 0 0 hPsi_site_2915 iPseU_CNN:0;iRNA_PseU:0 2916 chr19 56160612 56160612 1 + G T UCEC 56160612 + 56160592 56160632 41 AGATCTCCATTCCCTTCGATGAGGCACCCCACCTAGACCCA AGATCTCCATTCCCTTCGATTAGGCACCCCACCTAGACCCA Direct Gain 0 0.960709737399487 0 0.972404599189758 prediction 0.921419474798973 Functional Gain - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56160612 chr19:56160612 stopgain 0.502 1 21 hPsi_associated_SNPs_103956 0 0 0 0 1 Cytosol 0 0.438718592973336 0.944809198379516 0 hPsi_site_2916 iPseU_CNN:0.944809198379516;iRNA_PseU:0 2917 chr6 3017194 3017194 1 + C T UCEC 3017194 + 3017174 3017214 41 GACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCAC GACAGGAGTCAATGGAGATTTTCGATACTTCCTGTGGCCAC Direct Gain 0 0.960707148825702 0 0.953596711158752 prediction 0.921414297651405 Functional Gain - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3017194 chr6:3017194 nonsynonymous SNV 0.374 0 21 hPsi_associated_SNPs_103957 0 0 1 0 1 Ribosome 0 0.438663342260372 0.907193422317504 0 hPsi_site_2917 iPseU_CNN:0.907193422317504;iRNA_PseU:0 2918 chr10 60573609 60573609 1 + C T THCA 60573609 + 60573589 60573629 41 GGGCTCATCCATGTCCCTTTCACGGTCCAACAGTCGTGAGC GGGCTCATCCATGTCCCTTTTACGGTCCAACAGTCGTGAGC Direct Gain 0 0.9607065569956 0 0.996732294559479 prediction 0.921413113991201 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60573609 chr10:60573609 nonsynonymous SNV 0.965 3 21 hPsi_associated_SNPs_103958 0 0 1 0 1 nucleus 0 0.438724073920928 0.993464589118958 0 hPsi_site_2918 iPseU_CNN:0.993464589118958;iRNA_PseU:0 2919 chr1 145368669 145368669 1 + C T LUAD 145368669 + 145368649 145368689 41 CTGGTGTTCCAGATGGGAGTCATATTCCCACAATAAGCAGC CTGGTGTTCCAGATGGGAGTTATATTCCCACAATAAGCAGC Direct Gain 0 0.960699769017087 0 0.999941051006317 prediction 0.921399538034175 Functional Gain - NBPF9 ENSG00000163386 CDS Human other chr1:145368669 chr1:145368669 synonymous SNV . 0 21 hPsi_associated_SNPs_103959 0 0 0 0 0 exosome 0 0.438718590063069 0.999882102012634 0 hPsi_site_2919 iPseU_CNN:0.999882102012634;iRNA_PseU:0 2920 chr12 56489547 56489547 1 + T A STAD 56489547 - 56489527 56489567 41 TCATAGCCCTTTTATTCTGAATCCGGCGCCCACGCCAGTAG TCATAGCCCTTTTATTCTGATTCCGGCGCCCACGCCAGTAG Direct Gain 0 0.960687973675709 0 0.953857600688934 prediction 0.921375947351418 Functional Gain - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56489547 chr12:56489547 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103960 0 0 0 0 0 Cytosol 0 0.437828306502093 0.907715201377868 0 hPsi_site_2920 iPseU_CNN:0.907715201377868;iRNA_PseU:0 2921 chr10 1046733 1046733 1 + G A CESC 1046733 - 1046713 1046753 41 CCATGCCCACACTGCTCAGACAAATCCATCACATACAGGAC CCATGCCCACACTGCTCAGATAAATCCATCACATACAGGAC Direct Gain 0 0.960676270383008 0 0.859172224998474 prediction 0.921352540766016 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1046733 chr10:1046733 synonymous SNV . 0 21 hPsi_associated_SNPs_103961 0 0 0 0 0 Cytosol 0 0.43872004506783 0.718344449996948 0 hPsi_site_2921 iPseU_CNN:0.718344449996948;iRNA_PseU:0 2922 chr7 120385909 120385909 1 + C T SKCM 120385909 + 120385889 120385929 41 CTGTTAATCGTCCTTCAAGTCACAGTCCTTCACTGTCTTCA CTGTTAATCGTCCTTCAAGTTACAGTCCTTCACTGTCTTCA Direct Gain 0 0.960673022279898 0 0.99988454580307 prediction 0.921346044559795 Functional Gain - KCND2 ENSG00000184408 CDS Human protein_coding chr7:120385909 chr7:120385909 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_103962 0 0 0 0 1 exosome 0 0.438864072107452 0.99976909160614 0 hPsi_site_2922 iPseU_CNN:0.99976909160614;iRNA_PseU:0 2923 chr4 70080324 70080324 1 + C T SKCM 70080324 + 70080304 70080344 41 AGCTCTTTCAGGATTGTCTTCATATTCATCCAATGGCTGTA AGCTCTTTCAGGATTGTCTTTATATTCATCCAATGGCTGTA Direct Gain 0 0.960672330737053 0 0.999966382980347 prediction 0.921344661474106 Functional Gain - UGT2B11 ENSG00000213759 CDS Human protein_coding chr4:70080324 chr4:70080324 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_103963 0 0 0 0 0 exosome 0 0.438718833731269 0.999932765960694 0 hPsi_site_2923 iPseU_CNN:0.999932765960694;iRNA_PseU:0 2924 chr1 228335363 228335363 1 + G A SKCM 228335363 - 228335343 228335383 41 TGGGCAGCAGCCAGCCGCTTCACCAGGCTCTCCTCGGTTTC TGGGCAGCAGCCAGCCGCTTTACCAGGCTCTCCTCGGTTTC Direct Gain 0 0.960671734647542 0 0.982171416282654 prediction 0.921343469295085 Functional Gain - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335363 chr1:228335363 synonymous SNV . 0 21 hPsi_associated_SNPs_103964 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592999487 0.964342832565308 0 hPsi_site_2924 iPseU_CNN:0.964342832565308;iRNA_PseU:0 2925 chr5 35876556 35876556 1 + G A STAD 35876556 - 35876536 35876576 41 GTAGAAGCTGGACATGGTGACATATGCTTCTTCTTGATTTG GTAGAAGCTGGACATGGTGATATATGCTTCTTCTTGATTTG Direct Gain 0 0.960668855072812 0 0.99174690246582 prediction 0.921337710145625 Functional Gain - IL7R ENSG00000168685 CDS Human protein_coding chr5:35876556 chr5:35876556 nonsynonymous SNV 0.976 4 21 hPsi_associated_SNPs_103965 0 0 0 0 0 Endoplasmic reticulum 0 0.440748510154043 0.98349380493164 0 hPsi_site_2925 iPseU_CNN:0.98349380493164;iRNA_PseU:0 2926 chr14 24620535 24620535 1 + C T TGCT 24620535 + 24620515 24620555 41 GGAGAGCCTGGCTGGATCGTCATGGCAACCTTGATGAAGCT GGAGAGCCTGGCTGGATCGTTATGGCAACCTTGATGAAGCT Direct Gain 0 0.960668223048047 0 0.999969244003296 prediction 0.921336446096094 Functional Gain - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24620535 chr14:24620535 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_103966 0 0 1 0 2 Ribosome 0 0.451202666134509 0.999938488006592 0 hPsi_site_2926 iPseU_CNN:0.999938488006592;iRNA_PseU:0 2927 chr12 1895221 1895221 1 + G A UCEC 1895221 - 1895201 1895241 41 GTATCACAGTGCATCCTCTTCACTGCAGCCCCCGCCGATCA GTATCACAGTGCATCCTCTTTACTGCAGCCCCCGCCGATCA Direct Gain 0 0.960660609428129 0 0.999937355518341 prediction 0.921321218856258 Functional Gain - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1895221 chr12:1895221 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_103967 0 0 0 0 0 chromatin 0 0.438718876725852 0.999874711036682 0 hPsi_site_2927 iPseU_CNN:0.999874711036682;iRNA_PseU:0 2928 chr14 74523874 74523874 1 + C T BLCA 74523874 + 74523854 74523894 41 AGTAAGCTTCAAGATAAAATCTTCATCACCCAGCAAATTGC AGTAAGCTTCAAGATAAAATTTTCATCACCCAGCAAATTGC Direct Gain 0 0.960656010075304 0 0.998484909534454 prediction 0.921312020150608 Functional Gain - BBOF1 ENSG00000119636 CDS Human protein_coding chr14:74523874 chr14:74523874 synonymous SNV . 0 21 hPsi_associated_SNPs_103968 0 0 0 0 2 chromatin 0 0.438718566106697 0.996969819068908 0 hPsi_site_2928 iPseU_CNN:0.996969819068908;iRNA_PseU:0 2929 chr6 139094936 139094936 1 + C A rs34538642 139094936 - 139094916 139094956 41 GAGCCCCGGTCACATCCCGGGACCCGCTCCTCCGCAGCTCC GAGCCCCGGTCACATCCCGGTACCCGCTCCTCCGCAGCTCC Direct Gain 0 0.960655978624617 0 0.955245018005371 prediction 0.921311957249233 Functional Gain - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139094936 chr6:139094936 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_103969 0 0 0 0 0 Ribosome 0 0.438719482169115 0.910490036010742 0 hPsi_site_2929 iPseU_CNN:0.910490036010742;iRNA_PseU:0 2930 chr1 215408476 215408476 1 + G A rs375258876 215408476 - 215408456 215408496 41 AGAGAGGGCTATTTGATGTTCTCAATCACAGCAATCTCTTC AGAGAGGGCTATTTGATGTTTTCAATCACAGCAATCTCTTC Direct Gain 0 0.960636757893636 0 0.968521237373352 prediction 0.921273515787272 Functional Gain - KCNK2 ENSG00000082482 CDS Human protein_coding chr1:215408476 chr1:215408476 synonymous SNV . 0 21 hPsi_associated_SNPs_103970 0 0 0 0 0 exosome 0 0.438718609942435 0.937042474746704 0 hPsi_site_2930 iPseU_CNN:0.937042474746704;iRNA_PseU:0 2931 chr10 124907954 124907954 1 + C T COAD 124907954 + 124907934 124907974 41 GCCGGTGGCGTCTCCAGCTTCACCATCCAGTCCATCCTGGG GCCGGTGGCGTCTCCAGCTTTACCATCCAGTCCATCCTGGG Direct Gain 0 0.960634908670393 0 0.815711379051208 prediction 0.921269817340785 Functional Gain - HMX2 ENSG00000188816 CDS Human protein_coding chr10:124907954 chr10:124907954 synonymous SNV . 0 21 hPsi_associated_SNPs_103971 0 0 0 0 0 exosome 0 0.438708303695555 0.631422758102416 0 hPsi_site_2931 iPseU_CNN:0.631422758102416;iRNA_PseU:0 2932 chr19 57867889 57867889 1 + G A rs147228440 57867889 - 57867869 57867909 41 ACTGAAAAGCATCTGTCCATCATAGTCTCCTTGGTGTTGCC ACTGAAAAGCATCTGTCCATTATAGTCTCCTTGGTGTTGCC Direct Gain 0 0.960627664650246 0 0.998993277549744 prediction 0.921255329300491 Functional Gain - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57867889 chr19:57867889 nonsynonymous SNV 0.474 0 21 hPsi_associated_SNPs_103972 0 0 0 0 0 chromatin 0 0.439093163758049 0.997986555099488 0 hPsi_site_2932 iPseU_CNN:0.997986555099488;iRNA_PseU:0 2933 chr11 5757834 5757834 1 + C T UCEC 5757834 + 5757814 5757854 41 TGCTGGGATTCCCGGGCATTCACAGCTGGCAACACTGGCTA TGCTGGGATTCCCGGGCATTTACAGCTGGCAACACTGGCTA Direct Gain 0 0.960619182394615 0 0.993027150630951 prediction 0.921238364789231 Functional Gain - OR56B1 ENSG00000181023 CDS Human protein_coding chr11:5757834 chr11:5757834 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_103973 0 0 0 0 0 exosome 0 0.438718592907159 0.986054301261902 0 hPsi_site_2933 iPseU_CNN:0.986054301261902;iRNA_PseU:0 2934 chr9 140043502 140043502 1 + G A PRAD 140043502 - 140043482 140043522 41 GCCTCCATCAGCAGGGCCGTCACGTTCTTGGTCCCTGGGTC GCCTCCATCAGCAGGGCCGTTACGTTCTTGGTCCCTGGGTC Direct Gain 0 0.960616655107102 0 0.999998092651367 prediction 0.921233310214204 Functional Gain - GRIN1 ENSG00000176884 CDS Human protein_coding chr9:140043502 chr9:140043502 synonymous SNV . 0 21 hPsi_associated_SNPs_103974 0 0 0 0 0 exosome 0 0.438728390145972 0.999996185302734 0 hPsi_site_2934 iPseU_CNN:0.999996185302734;iRNA_PseU:0 2935 chr10 47087158 47087158 1 + G A SKCM 47087158 - 47087138 47087178 41 AGCGAGAGGATGGAGACCGTCACCGACATGCACTGGATGAA AGCGAGAGGATGGAGACCGTTACCGACATGCACTGGATGAA Direct Gain 0 0.960613722675997 0 0.999973356723785 prediction 0.921227445351994 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087158 chr10:47087158 synonymous SNV . 0 21 hPsi_associated_SNPs_103975 0 0 0 0 0 unknown 0 0.438605475930764 0.99994671344757 0 hPsi_site_2935 iPseU_CNN:0.99994671344757;iRNA_PseU:0 2936 chr19 58019455 58019455 1 + G A rs4801494 58019455 - 58019435 58019475 41 GTGCAGTGGCGTGATCTCGGCTCAATGCAACCTCCGCCTCC GTGCAGTGGCGTGATCTCGGTTCAATGCAACCTCCGCCTCC Direct Gain 0 0.960612698430864 0 0.999991595745087 prediction 0.921225396861728 Functional Gain - ZNF773 ENSG00000152439 UTR3 Human protein_coding chr19:58019455 chr19:58019455 . . 0 21 hPsi_associated_SNPs_103976 0 0 0 0 0 exosome 0 0.438776650664358 0.999983191490174 0 hPsi_site_2936 iPseU_CNN:0.999983191490174;iRNA_PseU:0 2937 chr15 68124680 68124680 1 + C T SARC 68124680 + 68124660 68124700 41 TGGAACGGGAATTTCAGAGTCTCAAAGGTACCCACTGCCAT TGGAACGGGAATTTCAGAGTTTCAAAGGTACCCACTGCCAT Direct Gain 0 0.960611668499621 0 0.861379623413086 prediction 0.921223336999243 Functional Gain - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68124680 chr15:68124680 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_103977 0 0 0 0 2 exosome 0 0.438744378024316 0.722759246826172 0 hPsi_site_2937 iPseU_CNN:0.722759246826172;iRNA_PseU:0 2938 chr21 43715169 43715169 1 + G A rs3788008 43715169 - 43715149 43715189 41 CAAAGTGCTGGGATTACAGACATGAGCCACCACGCCTGACT CAAAGTGCTGGGATTACAGATATGAGCCACCACGCCTGACT Direct Gain 0 0.96061142085821 0 0.988141179084778 prediction 0.92122284171642 Functional Gain - ABCG1 ENSG00000160179 intronic Human protein_coding chr21:43715169 chr21:43715169 . . 0 21 hPsi_associated_SNPs_103978 0 0 0 0 0 Cytosol 0 0.438144025905885 0.976282358169556 0 hPsi_site_2938 iPseU_CNN:0.976282358169556;iRNA_PseU:0 2939 chr15 78730672 78730672 1 + C T rs189535848 78730672 + 78730652 78730692 41 CCCCGGAGGGATAATATGGTCTCCGGCGATGGACGCCCCAA CCCCGGAGGGATAATATGGTTTCCGGCGATGGACGCCCCAA Direct Gain 0 0.960604228255265 0 0.112481623888016 prediction 0.92120845651053 Functional Gain - IREB2 ENSG00000136381 UTR5 Human protein_coding chr15:78730672 chr15:78730672 . . 0 21 hPsi_associated_SNPs_103979 0 0 1 0 1 Cytosol 0 0.438718106230042 0 0 hPsi_site_2939 iPseU_CNN:0;iRNA_PseU:0 2940 chr1 27632830 27632830 1 + G A OV 27632830 - 27632810 27632850 41 GCCCTCAGAGCTGTCCTCATCATCAGAGGCCCCGGCACCCC GCCCTCAGAGCTGTCCTCATTATCAGAGGCCCCGGCACCCC Direct Gain 0 0.960600659489995 0 0.0359635353088379 prediction 0.921201318979989 Functional Gain - WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27632830 chr1:27632830 nonsynonymous SNV 0.969 1 21 hPsi_associated_SNPs_103980 0 0 0 0 0 Cytosol 0 0.438718592993574 0 0 hPsi_site_2940 iPseU_CNN:0;iRNA_PseU:0 2941 chr19 6820720 6820720 1 + G A PAAD 6820720 - 6820700 6820740 41 AGGTTCTAATGTTCTTAAGGCACAGGAACTGTGAGGAGACA AGGTTCTAATGTTCTTAAGGTACAGGAACTGTGAGGAGACA Direct Gain 0 0.960598591151824 0 0.369094252586365 prediction 0.921197182303649 Functional Gain - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6820720 chr19:6820720 nonsynonymous SNV 0.963 4 21 hPsi_associated_SNPs_103981 0 0 0 0 0 Endoplasmic reticulum 0 0.438717496132846 0 0 hPsi_site_2941 iPseU_CNN:0;iRNA_PseU:0 2942 chr10 15145813 15145813 1 + G T UCEC 15145813 + 15145793 15145833 41 GGTCCCCCGGCTCAGTGAGAGAATCGCCCCCGTCATTGGCT GGTCCCCCGGCTCAGTGAGATAATCGCCCCCGTCATTGGCT Direct Gain 0 0.96058976831031 0 0.999477028846741 prediction 0.921179536620619 Functional Gain - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145813 chr10:15145813 nonsynonymous SNV 0.846 1 21 hPsi_associated_SNPs_103982 0 0 0 0 0 exosome 0 0.438718596268003 0.998954057693482 0 hPsi_site_2942 iPseU_CNN:0.998954057693482;iRNA_PseU:0 2943 chrX 92964723 92964723 1 + G T LUSC 92964723 + 92964703 92964743 41 AAAGAGAAAGAAGAAATCTTGTCGGTCTTCATCTTCTTCAT AAAGAGAAAGAAGAAATCTTTTCGGTCTTCATCTTCTTCAT Direct Gain 0 0.960578947074278 0 0.00685772299766541 prediction 0.921157894148556 Functional Gain - FAM133A ENSG00000179083 CDS Human protein_coding chrX:92964723 chrX:92964723 nonsynonymous SNV 0.337 0 21 hPsi_associated_SNPs_103983 0 0 0 0 0 exosome 0 0.438716222107408 0 0 hPsi_site_2943 iPseU_CNN:0;iRNA_PseU:0 2944 chr2 69053291 69053291 1 + G A GBM 69053291 - 69053271 69053311 41 GGGTTCCTTCATGGATTTGACAAATTCCTTGACTTCTTCTT GGGTTCCTTCATGGATTTGATAAATTCCTTGACTTCTTCTT Direct Gain 0 0.960578120290572 0 0.999336659908295 prediction 0.921156240581145 Functional Gain - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69053291 chr2:69053291 nonsynonymous SNV 0.990 1 21 hPsi_associated_SNPs_103984 0 0 0 0 0 chromatin 0 0.438718592867326 0.99867331981659 0 hPsi_site_2944 iPseU_CNN:0.99867331981659;iRNA_PseU:0 2945 chr22 45574763 45574763 1 + G A UCEC 45574763 - 45574743 45574783 41 ACCTTTGCATTCACCACTGTCACCTTCTGCTTGGCCCTCCA ACCTTTGCATTCACCACTGTTACCTTCTGCTTGGCCCTCCA Direct Gain 0 0.960574839955905 0 0.999729514122009 prediction 0.92114967991181 Functional Gain - NUP50 ENSG00000093000 CDS Human protein_coding chr22:45574763 chr22:45574763 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_103985 0 0 0 0 0 Ribosome 0 0.433164587270591 0.999459028244018 0 hPsi_site_2945 iPseU_CNN:0.999459028244018;iRNA_PseU:0 2946 chr22 26688729 26688729 1 + C A UCEC 26688729 - 26688709 26688749 41 AGAGGAGATCTAGGCCCTGGGACGCTGGCTGGGACCCTGCC AGAGGAGATCTAGGCCCTGGTACGCTGGCTGGGACCCTGCC Direct Gain 0 0.960570764923845 0 0.993351221084595 prediction 0.921141529847691 Functional Gain - SEZ6L ENSG00000100095 CDS Human protein_coding chr22:26688729 chr22:26688729 nonsynonymous SNV 0.002 2 21 hPsi_associated_SNPs_103986 0 0 0 0 0 exosome 0 0.438718590331757 0.98670244216919 0 hPsi_site_2946 iPseU_CNN:0.98670244216919;iRNA_PseU:0 2947 chr2 38407960 38407960 1 + C T UCEC 38407960 + 38407940 38407980 41 TGGAACAGAACCTCAAAAGTCATCATTAGACTTCCTACTAA TGGAACAGAACCTCAAAAGTTATCATTAGACTTCCTACTAA Direct Gain 0 0.960554854235854 0 0.983828186988831 prediction 0.921109708471709 Functional Gain - CYP1B1-AS1 ENSG00000232973 ncRNA_exonic Human antisense chr2:38407960 chr2:38407960 . . 0 21 hPsi_associated_SNPs_103987 0 0 0 0 0 unknown 0 0.438718600391524 0.967656373977662 0 hPsi_site_2947 iPseU_CNN:0.967656373977662;iRNA_PseU:0 2948 chr10 85968063 85968063 1 + C A LUAD 85968063 - 85968043 85968083 41 GGGGTGGGTGCTCATTCATGGACAGCTCAAACCTGTTTTGG GGGGTGGGTGCTCATTCATGTACAGCTCAAACCTGTTTTGG Direct Gain 0 0.960553614228649 0 0.999475717544556 prediction 0.921107228457298 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85968063 chr10:85968063 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_103988 0 0 0 0 0 cytosol 0 0.430503465244662 0.998951435089112 0 hPsi_site_2948 iPseU_CNN:0.998951435089112;iRNA_PseU:0 2949 chr15 85345216 85345216 1 + C T rs143259756 85345216 + 85345196 85345236 41 TGCGCGAAATGTAGTTTTGCCACAGACTCGGGGCTCGAGTT TGCGCGAAATGTAGTTTTGCTACAGACTCGGGGCTCGAGTT Direct Gain 0 0.960549591741355 0 0.999382019042969 prediction 0.92109918348271 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85345216 chr15:85345216 synonymous SNV . 0 21 hPsi_associated_SNPs_103989 0 0 1 0 0 Cytosol 0 0.438718555653771 0.998764038085938 0 hPsi_site_2949 iPseU_CNN:0.998764038085938;iRNA_PseU:0 2950 chr19 15945412 15945412 1 + C T rs11550960 15945412 + 15945392 15945432 41 TGGACCAGACCCTACCCGGTCATTTATAGCACACCAACTGC TGGACCAGACCCTACCCGGTTATTTATAGCACACCAACTGC Direct Gain 0 0.960549387387528 0 0.00625443458557129 prediction 0.921098774775057 Functional Gain - UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15945412 chr19:15945412 . . 0 21 hPsi_associated_SNPs_103990 0 0 1 0 0 unknown 0 0.438718595366549 0 0 hPsi_site_2950 iPseU_CNN:0;iRNA_PseU:0 2951 chr1 203452654 203452654 1 + C A UCEC 203452654 - 203452634 203452674 41 GACTCCACCGGGAGCTCAGTGATGAAGTTGTTCTGGAGATA GACTCCACCGGGAGCTCAGTTATGAAGTTGTTCTGGAGATA Direct Gain 0 0.960547309742644 0 0.215288996696472 prediction 0.921094619485289 Functional Gain - PRELP ENSG00000188783 CDS Human protein_coding chr1:203452654 chr1:203452654 synonymous SNV . 0 21 hPsi_associated_SNPs_103991 0 0 0 0 0 exosome 0 0.438706392984012 0 0 hPsi_site_2951 iPseU_CNN:0;iRNA_PseU:0 2952 chr1 24077712 24077712 1 + C T BLCA 24077712 + 24077692 24077732 41 GGACCAGGAGCCCATTGTTTCACACCAGAAGCCTGGGAAAG GGACCAGGAGCCCATTGTTTTACACCAGAAGCCTGGGAAAG Direct Gain 0 0.960543987763717 0 0.986600637435913 prediction 0.921087975527434 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077712 chr1:24077712 nonsynonymous SNV 0.254 0 21 hPsi_associated_SNPs_103992 0 0 1 0 0 unknown 0 0.438718619841099 0.973201274871826 0 hPsi_site_2952 iPseU_CNN:0.973201274871826;iRNA_PseU:0 2953 chr19 58190226 58190226 1 + G A LUSC 58190226 - 58190206 58190246 41 ACTTGGCAGGGTAATTTTCTCATGAGTCCTCATATGGCGGT ACTTGGCAGGGTAATTTTCTTATGAGTCCTCATATGGCGGT Direct Gain 0 0.960528106679633 0 0.877630352973938 prediction 0.921056213359265 Functional Gain - ZSCAN4 ENSG00000180532 CDS Human protein_coding chr19:58190226 chr19:58190226 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_103993 0 0 0 0 0 exosome 0 0.438720914935019 0.755260705947876 0 hPsi_site_2953 iPseU_CNN:0.755260705947876;iRNA_PseU:0 2954 chr20 31680332 31680332 1 + G A rs113445311 31680332 - 31680312 31680352 41 GGAGGCAGCTCTGGCATCGGCTTGGGAGACACAGCTGGCCA GGAGGCAGCTCTGGCATCGGTTTGGGAGACACAGCTGGCCA Direct Gain 0 0.960523375890683 0 0.995856821537018 prediction 0.921046751781366 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31680332 chr20:31680332 synonymous SNV . 0 21 hPsi_associated_SNPs_103994 0 0 0 0 0 exosome 0 0.438718593289848 0.991713643074036 0 hPsi_site_2954 iPseU_CNN:0.991713643074036;iRNA_PseU:0 2955 chr11 62554015 62554015 1 + G A ESCA 62554015 - 62553995 62554035 41 GGCTCTGCTGCCTGGGCCTTCATCTTCAGCAGTCGCTCTAC GGCTCTGCTGCCTGGGCCTTTATCTTCAGCAGTCGCTCTAC Direct Gain 0 0.960522506655905 0 0.99968159198761 prediction 0.92104501331181 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554015 chr11:62554015 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_103995 0 0 0 0 0 Ribosome 0 0.438718601643904 0.99936318397522 0 hPsi_site_2955 iPseU_CNN:0.99936318397522;iRNA_PseU:0 2956 chr19 55021778 55021778 1 + G A LUSC 55021778 - 55021758 55021798 41 GGAGGCCATTTCTCCTCATTCATGGTGCATCAAATCCGGAG GGAGGCCATTTCTCCTCATTTATGGTGCATCAAATCCGGAG Direct Gain 0 0.960518708077701 0 0.560975849628448 prediction 0.921037416155402 Functional Gain - LAIR2 ENSG00000167618 CDS Human protein_coding chr19:55021778 chr19:55021778 synonymous SNV . 0 21 hPsi_associated_SNPs_103996 0 0 0 0 0 exosome 0 0.438718595309563 0.121951699256896 0 hPsi_site_2956 iPseU_CNN:0.121951699256896;iRNA_PseU:0 2957 chr14 50789621 50789621 1 + C T rs117130531 50789621 + 50789601 50789641 41 GAGGTTACAGACACCTTCCTCTCCTTCCTCCTCTCACTAAG GAGGTTACAGACACCTTCCTTTCCTTCCTCCTCTCACTAAG Direct Gain 0 0.960504654262758 0 0.999912142753601 prediction 0.921009308525515 Functional Gain - ATP5S ENSG00000125375 intronic Human protein_coding chr14:50789621 chr14:50789621 . . 0 21 hPsi_associated_SNPs_103997 0 0 1 0 0 Cytosol 0 0.438719251164192 0.999824285507202 0 hPsi_site_2957 iPseU_CNN:0.999824285507202;iRNA_PseU:0 2958 chr2 102984502 102984502 1 + C A OV 102984502 - 102984482 102984522 41 TGGAAAAAGTAAGATCCTGTGTCATTCAACTCAACTGGCCA TGGAAAAAGTAAGATCCTGTTTCATTCAACTCAACTGGCCA Direct Gain 0 0.96049810875983 0 0.999660611152649 prediction 0.920996217519661 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:102984502 chr2:102984502 nonsynonymous SNV 0.056 3 21 hPsi_associated_SNPs_103998 0 0 0 0 0 Nucleus 0 0.438523998750447 0.999321222305298 0 hPsi_site_2958 iPseU_CNN:0.999321222305298;iRNA_PseU:0 2959 chr19 50360315 50360315 1 + C T SKCM 50360315 + 50360295 50360335 41 TCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGA TCGTCCAAGAAGAAGATCTTTATGGGCCTCATCCCCTACGA Direct Gain 0 0.96049605620204 0 0.984656989574432 prediction 0.920992112404079 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50360315 chr19:50360315 synonymous SNV . 0 21 hPsi_associated_SNPs_103999 0 0 1 1 2 Ribosome 0 0.438745566724527 0.969313979148864 0 hPsi_site_2959 iPseU_CNN:0.969313979148864;iRNA_PseU:0 2960 chr11 26677930 26677930 1 + G A CESC 26677930 - 26677910 26677950 41 CCAGGGCGGGCCTCTGTAGTCTCTGTACCTGAAATCCACAA CCAGGGCGGGCCTCTGTAGTTTCTGTACCTGAAATCCACAA Direct Gain 0 0.960495629264208 0 0.99884706735611 prediction 0.920991258528416 Functional Gain - ANO3 ENSG00000134343 CDS Human protein_coding chr11:26677930 chr11:26677930 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104000 0 0 0 0 0 Endoplasmic reticulum 0 0.438718563277871 0.99769413471222 0 hPsi_site_2960 iPseU_CNN:0.99769413471222;iRNA_PseU:0 2961 chrX 138644064 138644064 1 + G A UCEC 138644064 - 138644044 138644084 41 GTCCCCCACTATCTCCTTGACATGAATCTCTACCTCCTTCA GTCCCCCACTATCTCCTTGATATGAATCTCTACCTCCTTCA Direct Gain 0 0.960476445890466 0 0.943941593170166 prediction 0.920952891780932 Functional Gain - F9 ENSG00000101981 CDS Human protein_coding chrX:138644064 chrX:138644064 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_104001 0 0 0 0 0 exosome 0 0.43871804261207 0.887883186340332 0 hPsi_site_2961 iPseU_CNN:0.887883186340332;iRNA_PseU:0 2962 chr7 146471409 146471409 1 + C A BLCA 146471409 - 146471389 146471429 41 GAGATGGAGGAGGAGCTGCTGAAAGCCACATGGGGGAGTCC GAGATGGAGGAGGAGCTGCTTAAAGCCACATGGGGGAGTCC Direct Gain 0 0.960470755853255 0 0.875558018684387 prediction 0.920941511706509 Functional Gain - CNTNAP2 ENSG00000174469 CDS Human protein_coding chr7:146471409 chr7:146471409 nonsynonymous SNV 0.764 3 21 hPsi_associated_SNPs_104002 0 0 0 0 0 Ribosome 0 0.438718579819458 0.751116037368774 0 hPsi_site_2962 iPseU_CNN:0.751116037368774;iRNA_PseU:0 2963 chr8 72967815 72967815 1 + C A LIHC 72967815 - 72967795 72967835 41 TTATGGGCGTATCAATACCTGTCAGAGGCTCCTACAAGACA TTATGGGCGTATCAATACCTTTCAGAGGCTCCTACAAGACA Direct Gain 0 0.960460931701769 0 0.715141952037811 prediction 0.920921863403537 Functional Gain - TRPA1 ENSG00000104321 CDS Human protein_coding chr8:72967815 chr8:72967815 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_104003 0 0 0 0 1 chromatin 0 0.438713926598393 0.430283904075622 0 hPsi_site_2963 iPseU_CNN:0.430283904075622;iRNA_PseU:0 2964 chr11 76507252 76507252 1 + G A STAD 76507252 - 76507232 76507272 41 GTCTCGGAGGTTGGGCACGGCATGGAGCCGGTTCCAGGCCA GTCTCGGAGGTTGGGCACGGTATGGAGCCGGTTCCAGGCCA Direct Gain 0 0.960457163336869 0 0.999945402145386 prediction 0.920914326673738 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507252 chr11:76507252 nonsynonymous SNV 0.017 0 21 hPsi_associated_SNPs_104004 0 0 0 0 0 Endoplasmic reticulum 0 0.438716524456797 0.999890804290772 0 hPsi_site_2964 iPseU_CNN:0.999890804290772;iRNA_PseU:0 2965 chr1 22987627 22987627 1 + C T LUSC 22987627 + 22987607 22987647 41 GTGCCCGGTCTCTACTACTTCACCTACCACGCCAGCTCTCG GTGCCCGGTCTCTACTACTTTACCTACCACGCCAGCTCTCG Direct Gain 0 0.960440218728979 0 0.999915957450867 prediction 0.920880437457959 Functional Gain - C1QB ENSG00000173369 CDS Human protein_coding chr1:22987627 chr1:22987627 synonymous SNV . 0 21 hPsi_associated_SNPs_104005 0 0 0 0 0 exosome 0 0.438712965072653 0.999831914901734 0 hPsi_site_2965 iPseU_CNN:0.999831914901734;iRNA_PseU:0 2966 chrX 128926729 128926729 1 + G A rs2231131 128926729 - 128926709 128926749 41 CTGTCGGCGGCTGGGGCGGGCATGCCCCACGGCCTCCTCGG CTGTCGGCGGCTGGGGCGGGTATGCCCCACGGCCTCCTCGG Direct Gain 0 0.960430471266053 0 0.997320652008057 prediction 0.920860942532105 Functional Gain - SASH3 ENSG00000122122 CDS Human protein_coding chrX:128926729 chrX:128926729 nonsynonymous SNV 0.713 0 21 hPsi_associated_SNPs_104006 0 0 0 0 0 exosome 0 0.438718588590567 0.994641304016114 0 hPsi_site_2966 iPseU_CNN:0.994641304016114;iRNA_PseU:0 2967 chr22 22380712 22380712 1 + C T LUSC 22380712 + 22380692 22380732 41 GGGACCGTGGGACAGAAGGTCACCCTCTCCTGTACTGGAAA GGGACCGTGGGACAGAAGGTTACCCTCTCCTGTACTGGAAA Direct Gain 0 0.960425024844074 0 0.887450814247131 prediction 0.920850049688149 Functional Gain - PRAMENP ENSG00000197549;ENSG00000253239 ncRNA_exonic Human other chr22:22380712 chr22:22380712 . . 0 21 hPsi_associated_SNPs_104007 0 0 0 0 0 unknown 0 0.438854630262521 0.774901628494262 0 hPsi_site_2967 iPseU_CNN:0.774901628494262;iRNA_PseU:0 2968 chr18 51908403 51908403 1 + C T rs1344883 51908403 + 51908383 51908423 41 AAGAGACCACATTCTTTACTCATGTGAGGTTCTGGAAATCC AAGAGACCACATTCTTTACTTATGTGAGGTTCTGGAAATCC Direct Gain 0 0.96042148084281 0 0.598180294036865 prediction 0.92084296168562 Functional Gain - C18orf54 ENSG00000166845 intronic Human protein_coding chr18:51908403 chr18:51908403 . . 0 21 hPsi_associated_SNPs_104008 0 0 0 0 0 chromatin 0 0.438718592994298 0.19636058807373 0 hPsi_site_2968 iPseU_CNN:0.19636058807373;iRNA_PseU:0 2969 chr16 22291526 22291526 1 + G A LGG 22291526 - 22291506 22291546 41 GTGCAGGGCCTCTAGCCAGTCTTGGCACCTTGCCAGGAGAT GTGCAGGGCCTCTAGCCAGTTTTGGCACCTTGCCAGGAGAT Direct Gain 0 0.960421314576535 0 0.999991655349731 prediction 0.920842629153071 Functional Gain - EEF2K ENSG00000103319 CDS Human protein_coding chr16:22291526 chr16:22291526 nonsynonymous SNV 0.986 0 21 hPsi_associated_SNPs_104009 0 0 0 0 0 Nucleus 0 0.438718592995101 0.999983310699462 0 hPsi_site_2969 iPseU_CNN:0.999983310699462;iRNA_PseU:0 2970 chr12 58335538 58335538 1 + G A COAD 58335538 - 58335518 58335558 41 CAAGAGACGTGTTGCTGCTGCAGCTGCTCCCCTGCCGCGGG CAAGAGACGTGTTGCTGCTGTAGCTGCTCCCCTGCCGCGGG Direct Gain 0 0.960412848748071 0 0.986581206321716 prediction 0.920825697496142 Functional Gain - ATP23 ENSG00000166896 CDS Human protein_coding chr12:58335538 chr12:58335538 synonymous SNV . 0 21 hPsi_associated_SNPs_104010 0 0 0 0 0 Cytosol 0 0.438749664426169 0.973162412643432 0 hPsi_site_2970 iPseU_CNN:0.973162412643432;iRNA_PseU:0 2971 chr1 234458927 234458927 1 + G A LAML 234458927 - 234458907 234458947 41 AGGTCCTGAGCTCAGGTCGGCAGCGCCCTCTGCAGGCTCCT AGGTCCTGAGCTCAGGTCGGTAGCGCCCTCTGCAGGCTCCT Direct Gain 0 0.960405577674735 0 0.25309294462204 prediction 0.92081115534947 Functional Gain - SLC35F3 ENSG00000183780 CDS Human protein_coding chr1:234458927 chr1:234458927 nonsynonymous SNV 0.029 0 21 hPsi_associated_SNPs_104011 0 0 0 0 0 nucleoplasm 0 0.438719517719216 0 0 hPsi_site_2971 iPseU_CNN:0;iRNA_PseU:0 2972 chr12 69746964 69746964 1 + G T UCEC 69746964 + 69746944 69746984 41 GAAATCGTTGTCAAAACAGAGATGTCCGTCAGTATGTTCAA GAAATCGTTGTCAAAACAGATATGTCCGTCAGTATGTTCAA Direct Gain 0 0.960404496080173 0 0.760037064552307 prediction 0.920808992160347 Functional Gain - LYZ ENSG00000090382 CDS Human protein_coding chr12:69746964 chr12:69746964 nonsynonymous SNV 0.021 4 21 hPsi_associated_SNPs_104012 0 0 1 0 0 Endoplasmic reticulum 0 0.417662483926668 0.520074129104614 0 hPsi_site_2972 iPseU_CNN:0.520074129104614;iRNA_PseU:0 2973 chr4 47427767 47427767 1 + G A UCEC 47427767 - 47427747 47427787 41 TGGCCTTGGGGTCGCTCACGCTCGTGAGCACTTCCGAGCCA TGGCCTTGGGGTCGCTCACGTTCGTGAGCACTTCCGAGCCA Direct Gain 0 0.960399658050552 0 0.983277320861816 prediction 0.920799316101103 Functional Gain - GABRB1 ENSG00000163288 CDS Human protein_coding chr4:47427767 chr4:47427767 nonsynonymous SNV 0.006 1 21 hPsi_associated_SNPs_104013 0 0 0 0 0 Cytosol 0 0.438783696181055 0.966554641723632 0 hPsi_site_2973 iPseU_CNN:0.966554641723632;iRNA_PseU:0 2974 chr2 113832387 113832387 1 + C T LIHC 113832387 + 113832367 113832407 41 GGGAGGGAGCCGCTGCCTGGCATGTGTGGAGACAGAAGAGG GGGAGGGAGCCGCTGCCTGGTATGTGTGGAGACAGAAGAGG Direct Gain 0 0.960395215850146 0 0.994627952575684 prediction 0.920790431700292 Functional Gain - IL1F10 ENSG00000136697 CDS Human protein_coding chr2:113832387 chr2:113832387 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_104014 0 0 0 0 2 unknown 0 0.438685568765604 0.989255905151368 0 hPsi_site_2974 iPseU_CNN:0.989255905151368;iRNA_PseU:0 2975 chr6 3287237 3287237 1 + C T LUSC 3287237 + 3287217 3287257 41 GCTGGCCGTGGTATAGTAGTCAGCATAGAAGTTCTCCAGGA GCTGGCCGTGGTATAGTAGTTAGCATAGAAGTTCTCCAGGA Direct Gain 0 0.960393718806066 0 0.257171034812927 prediction 0.920787437612132 Functional Gain - SLC22A23 ENSG00000137266 CDS Human protein_coding chr6:3287237 chr6:3287237 nonsynonymous SNV 0.895 1 21 hPsi_associated_SNPs_104015 0 0 0 2 0 Endoplasmic reticulum 0 0.438718662788393 0 0 hPsi_site_2975 iPseU_CNN:0;iRNA_PseU:0 2976 chr3 42679552 42679552 1 + G A GBM 42679552 - 42679532 42679572 41 AGACCTGTCTCTACCTTTGACATATTTACTGTGAAGTGTCT AGACCTGTCTCTACCTTTGATATATTTACTGTGAAGTGTCT Direct Gain 0 0.960390784572214 0 0.373698115348816 prediction 0.920781569144428 Functional Gain - NKTR ENSG00000114857 CDS Human protein_coding chr3:42679552 chr3:42679552 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_104016 0 0 0 0 0 Nucleus 0 0.438748548698095 0 0 hPsi_site_2976 iPseU_CNN:0;iRNA_PseU:0 2977 chr15 84611767 84611767 1 + C T LUAD 84611767 + 84611747 84611787 41 ATTGTGCCAAGGACCCAAGGCATCGTCTCACAAGTCCTGTG ATTGTGCCAAGGACCCAAGGTATCGTCTCACAAGTCCTGTG Direct Gain 0 0.96038283321424 0 0.999650299549103 prediction 0.920765666428481 Functional Gain - ADAMTSL3 ENSG00000156218 CDS Human protein_coding chr15:84611767 chr15:84611767 nonsynonymous SNV 0.963 0 21 hPsi_associated_SNPs_104017 0 0 0 0 1 cytosol 0 0.438718592741636 0.999300599098206 0 hPsi_site_2977 iPseU_CNN:0.999300599098206;iRNA_PseU:0 2978 chr8 17823920 17823920 1 + C T SKCM 17823920 + 17823900 17823940 41 GCATCTCCTCAAGTACACTTCATAATGCACCAGTTGAACCA GCATCTCCTCAAGTACACTTTATAATGCACCAGTTGAACCA Direct Gain 0 0.960382827305365 0 0.992067217826843 prediction 0.92076565461073 Functional Gain - PCM1 ENSG00000078674 CDS Human protein_coding chr8:17823920 chr8:17823920 synonymous SNV . 0 21 hPsi_associated_SNPs_104018 0 0 1 0 2 Nucleus 0 0.438595185182122 0.984134435653686 0 hPsi_site_2978 iPseU_CNN:0.984134435653686;iRNA_PseU:0 2979 chr11 48328536 48328536 1 + C T SKCM 48328536 + 48328516 48328556 41 GTTCTCATGCCCCCCATGTTCATGTACATTCGTCCCTCCAC GTTCTCATGCCCCCCATGTTTATGTACATTCGTCCCTCCAC Direct Gain 0 0.960382509378455 0 0.128672033548355 prediction 0.92076501875691 Functional Gain - OR4S1 ENSG00000176555 CDS Human protein_coding chr11:48328536 chr11:48328536 synonymous SNV . 0 21 hPsi_associated_SNPs_104019 0 0 0 0 0 unknown 0 0.440725643240635 0 0 hPsi_site_2979 iPseU_CNN:0;iRNA_PseU:0 2980 chr3 14170992 14170992 1 + G A CESC 14170992 - 14170972 14171012 41 ACAAACATCCCACCCGAGGTCTCGCTCAGCCGTTCCAGGAA ACAAACATCCCACCCGAGGTTTCGCTCAGCCGTTCCAGGAA Direct Gain 0 0.96036851447366 0 0.441578209400177 prediction 0.92073702894732 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14170992 chr3:14170992 synonymous SNV . 0 21 hPsi_associated_SNPs_104020 0 0 0 0 0 Ribosome 0 0.438717713385841 0 0 hPsi_site_2980 iPseU_CNN:0;iRNA_PseU:0 2981 chr2 201683504 201683504 1 + G A LGG 201683504 - 201683484 201683524 41 TCTGGGATGTTGTTTTTTTTCATCTCCTCCTTGACATATAA TCTGGGATGTTGTTTTTTTTTATCTCCTCCTTGACATATAA Direct Gain 0 0.960362017335167 0 0.961712896823883 prediction 0.920724034670333 Functional Gain - BZW1 ENSG00000082153 CDS Human protein_coding chr2:201683504 chr2:201683504 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104021 0 0 0 0 0 Ribosome 0 0.438718590117548 0.923425793647766 0 hPsi_site_2981 iPseU_CNN:0.923425793647766;iRNA_PseU:0 2982 chr1 237774098 237774098 1 + G T SKCM 237774098 + 237774078 237774118 41 CGGCGGGATTATTCAAGAGTGAGCACAAGAACCCCGTGCCG CGGCGGGATTATTCAAGAGTTAGCACAAGAACCCCGTGCCG Direct Gain 0 0.960343303817072 0 0.999195396900177 prediction 0.920686607634143 Functional Gain - RYR2 ENSG00000198626 CDS Human protein_coding chr1:237774098 chr1:237774098 stopgain 0.968 0 21 hPsi_associated_SNPs_104022 0 0 0 0 1 nucleolus 0 0.438795469370161 0.998390793800354 0 hPsi_site_2982 iPseU_CNN:0.998390793800354;iRNA_PseU:0 2983 chr6 3287145 3287145 1 + G A COAD 3287145 - 3287125 3287165 41 CGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCACCGCCCT CGCAGGGGAGGGCTGCTGCTTTTCATGATCCTCACCGCCCT Direct Gain 0 0.960341502768992 0 0.951489567756653 prediction 0.920683005537984 Functional Gain - SLC22A23 ENSG00000137266 CDS Human protein_coding chr6:3287145 chr6:3287145 synonymous SNV . 0 21 hPsi_associated_SNPs_104023 0 0 0 0 1 Endoplasmic reticulum 0 0.438717902870766 0.902979135513306 0 hPsi_site_2983 iPseU_CNN:0.902979135513306;iRNA_PseU:0 2984 chr17 73726363 73726363 1 + C T COAD 73726363 + 73726343 73726383 41 GACAGCACCCACCTGCTGGTCTTCTCCACCGAGTCAGCCTT GACAGCACCCACCTGCTGGTTTTCTCCACCGAGTCAGCCTT Direct Gain 0 0.960341237104778 0 0.999800682067871 prediction 0.920682474209557 Functional Gain - ITGB4 ENSG00000132470 CDS Human protein_coding chr17:73726363 chr17:73726363 synonymous SNV . 0 21 hPsi_associated_SNPs_104024 0 0 0 0 1 Cytosol 0 0.438718389038817 0.999601364135742 0 hPsi_site_2984 iPseU_CNN:0.999601364135742;iRNA_PseU:0 2985 chr1 15893684 15893684 1 + G A KIRC 15893684 - 15893664 15893704 41 GACAGGATGAGGACCACATTCATGTGGCCTGGCCTCAGACG GACAGGATGAGGACCACATTTATGTGGCCTGGCCTCAGACG Direct Gain 0 0.960339917497239 0 0.991002321243286 prediction 0.920679834994478 Functional Gain - DNAJC16 ENSG00000116138 CDS Human protein_coding chr1:15893684 chr1:15893684 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104025 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592994573 0.982004642486572 0 hPsi_site_2985 iPseU_CNN:0.982004642486572;iRNA_PseU:0 2986 chr5 169018214 169018214 1 + G A UCEC 169018214 - 169018194 169018234 41 CCCAACCTTAGTTTTTAGTTCATTCACTTCCTGTCCATGGC CCCAACCTTAGTTTTTAGTTTATTCACTTCCTGTCCATGGC Direct Gain 0 0.960338692079986 0 0.720659375190735 prediction 0.920677384159971 Functional Gain - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169018214 chr5:169018214 nonsynonymous SNV 0.683 1 21 hPsi_associated_SNPs_104026 0 0 0 0 0 chromatin 0 0.438710726442097 0.44131875038147 0 hPsi_site_2986 iPseU_CNN:0.44131875038147;iRNA_PseU:0 2987 chr7 56119613 56119613 1 + C A LIHC 56119613 - 56119593 56119633 41 TGCAGACCCCGCGCTGCGCTGATGTTGACCGCCAGCGCCGC TGCAGACCCCGCGCTGCGCTTATGTTGACCGCCAGCGCCGC Direct Gain 0 0.960337282355669 0 0.998859226703644 prediction 0.920674564711339 Functional Gain - CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119613 chr7:56119613 synonymous SNV . 0 21 hPsi_associated_SNPs_104027 0 0 0 0 0 Ribosome 0 0.440446124616033 0.997718453407288 0 hPsi_site_2987 iPseU_CNN:0.997718453407288;iRNA_PseU:0 2988 chr1 51736919 51736919 1 + G T SARC 51736919 + 51736899 51736939 41 GACTGTATAGATGACTGGTTGATGAGATCCTTCACGTGCCC GACTGTATAGATGACTGGTTTATGAGATCCTTCACGTGCCC Direct Gain 0 0.960328448423063 0 0.37415474653244 prediction 0.920656896846126 Functional Gain - RNF11 ENSG00000123091 CDS Human protein_coding chr1:51736919 chr1:51736919 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104028 0 0 1 0 1 Cytosol 0 0.438718094792347 0 0 hPsi_site_2988 iPseU_CNN:0;iRNA_PseU:0 2989 chr19 34304035 34304035 1 + G A rs138922043 34304035 - 34304015 34304055 41 ATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGT ATCAACAGTCCTTCTGCAGGTATGCCTCCAGCATCCCACGT Direct Gain 0 0.960327084998314 0 0.999999403953552 prediction 0.920654169996628 Functional Gain - KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304035 chr19:34304035 . . 0 21 hPsi_associated_SNPs_104029 0 0 0 0 0 Cytosol 0 0.438716732025451 0.999998807907104 0 hPsi_site_2989 iPseU_CNN:0.999998807907104;iRNA_PseU:0 2990 chr5 176798361 176798361 1 + C A UCEC 176798361 - 176798341 176798381 41 GATTTGTCACGGGCTTTGGAGATCTTCACACCTGCAGCAGA GATTTGTCACGGGCTTTGGATATCTTCACACCTGCAGCAGA Direct Gain 0 0.960326250388554 0 0.994189143180847 prediction 0.920652500777108 Functional Gain - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176798361 chr5:176798361 synonymous SNV . 0 21 hPsi_associated_SNPs_104030 0 0 0 0 0 nucleolus 0 0.438788104847426 0.988378286361694 0 hPsi_site_2990 iPseU_CNN:0.988378286361694;iRNA_PseU:0 2991 chr7 42977140 42977140 1 + G A COAD 42977140 - 42977120 42977160 41 CCAGGATGGTCGCTTTCTGTCTCGTTCAATGATCCTCTTGC CCAGGATGGTCGCTTTCTGTTTCGTTCAATGATCCTCTTGC Direct Gain 0 0.960326085614516 0 0.857328772544861 prediction 0.920652171229031 Functional Gain - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42977140 chr7:42977140 nonsynonymous SNV 0.902 0 21 hPsi_associated_SNPs_104031 0 0 0 0 0 Ribosome 0 0.438700391139107 0.714657545089722 0 hPsi_site_2991 iPseU_CNN:0.714657545089722;iRNA_PseU:0 2992 chr6 25610280 25610280 1 + G A BLCA 25610280 - 25610260 25610300 41 AGATGGAGAGTCTGGAATGTCATCTAAGGAGACACAAACAC AGATGGAGAGTCTGGAATGTTATCTAAGGAGACACAAACAC Direct Gain 0 0.960318783479702 0 0.999571442604065 prediction 0.920637566959405 Functional Gain - CARMIL1 ENSG00000079691 CDS Human protein_coding chr6:25610280 chr6:25610280 nonsynonymous SNV 0.028 1 21 hPsi_associated_SNPs_104032 0 0 0 0 0 unknown 0 0.438718401443913 0.99914288520813 0 hPsi_site_2992 iPseU_CNN:0.99914288520813;iRNA_PseU:0 2993 chr17 43922943 43922943 1 + C A UCEC 43922943 - 43922923 43922963 41 GCAGCTGATGGTGACCACCAGACCCCCCTCCTCTTCGGGCA GCAGCTGATGGTGACCACCATACCCCCCTCCTCTTCGGGCA Direct Gain 0 0.960308678677433 0 0.999796032905579 prediction 0.920617357354867 Functional Gain - SPPL2C ENSG00000185294 CDS Human protein_coding chr17:43922943 chr17:43922943 nonsynonymous SNV 0.016 0 21 hPsi_associated_SNPs_104033 0 0 0 0 0 unknown 0 0.438718606540269 0.999592065811158 0 hPsi_site_2993 iPseU_CNN:0.999592065811158;iRNA_PseU:0 2994 chr22 45813510 45813510 1 + C T BLCA 45813510 + 45813490 45813530 41 ATGAGGCAAAATGACAAAATCATGTGCATATTGGAAAACCG ATGAGGCAAAATGACAAAATTATGTGCATATTGGAAAACCG Direct Gain 0 0.960303563191295 0 0.358490169048309 prediction 0.920607126382589 Functional Gain - RIBC2 ENSG00000128408 CDS Human protein_coding chr22:45813510 chr22:45813510 synonymous SNV . 0 21 hPsi_associated_SNPs_104034 0 0 0 0 1 exosome 0 0.43895294606758 0 0 hPsi_site_2994 iPseU_CNN:0;iRNA_PseU:0 2995 chr16 2256580 2256580 1 + C A LIHC 2256580 - 2256560 2256600 41 TCGTGGAAGCCCACAGACGCGATGTTCTTGTTGACGCCGTC TCGTGGAAGCCCACAGACGCTATGTTCTTGTTGACGCCGTC Direct Gain 0 0.96030343954565 0 0.998396337032318 prediction 0.9206068790913 Functional Gain - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2256580 chr16:2256580 synonymous SNV . 0 21 hPsi_associated_SNPs_104035 0 0 0 0 0 chromatin 0 0.439143357505575 0.996792674064636 0 hPsi_site_2995 iPseU_CNN:0.996792674064636;iRNA_PseU:0 2996 chr19 19330052 19330052 1 + C A LGG 19330052 - 19330032 19330072 41 TGGCAGCGGTACAGCCCAGAGTCACTGGCCCTCAGTGGCCC TGGCAGCGGTACAGCCCAGATTCACTGGCCCTCAGTGGCCC Direct Gain 0 0.960300587419194 0 0.30673086643219 prediction 0.920601174838389 Functional Gain - NCAN ENSG00000130287 CDS Human protein_coding chr19:19330052 chr19:19330052 nonsynonymous SNV 0.385 5 21 hPsi_associated_SNPs_104036 0 0 0 0 0 exosome 0 0.438779263479958 0 0 hPsi_site_2996 iPseU_CNN:0;iRNA_PseU:0 2997 chr12 72680646 72680646 1 + C T SKCM 72680646 + 72680626 72680666 41 ATGGGTTACGGATCACTTTTCACAGACCCCTCTCATGTCCA ATGGGTTACGGATCACTTTTTACAGACCCCTCTCATGTCCA Direct Gain 0 0.960297485048328 0 0.385747849941254 prediction 0.920594970096655 Functional Gain - TRHDE ENSG00000072657 CDS Human protein_coding chr12:72680646 chr12:72680646 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104037 0 0 0 0 1 exosome 0 0.438713012692795 0 0 hPsi_site_2997 iPseU_CNN:0;iRNA_PseU:0 2998 chr17 45473259 45473259 1 + G A HNSC 45473259 - 45473239 45473279 41 AGACAGAGTATTCCACAGGTCAGAAACACTCATCGTCTCCT AGACAGAGTATTCCACAGGTTAGAAACACTCATCGTCTCCT Direct Gain 0 0.960291879899713 0 0.83147144317627 prediction 0.920583759799426 Functional Gain - EFCAB13 ENSG00000178852 CDS Human protein_coding chr17:45473259 chr17:45473259 nonsynonymous SNV 0.063 0 21 hPsi_associated_SNPs_104038 0 0 0 0 0 Nucleus 0 0.438661557363738 0.66294288635254 0 hPsi_site_2998 iPseU_CNN:0.66294288635254;iRNA_PseU:0 2999 chr15 90167441 90167441 1 + G A UCEC 90167441 - 90167421 90167461 41 GTAACAGGTGGGGAAGAAGTCACAGTTGAATTCCCTGGTCT GTAACAGGTGGGGAAGAAGTTACAGTTGAATTCCCTGGTCT Direct Gain 0 0.960281052407228 0 0.999999403953552 prediction 0.920562104814457 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90167441 chr15:90167441 synonymous SNV . 0 21 hPsi_associated_SNPs_104039 0 0 0 0 0 chromatin 0 0.438718687681033 0.999998807907104 0 hPsi_site_2999 iPseU_CNN:0.999998807907104;iRNA_PseU:0 3000 chr4 3149776 3149776 1 + G A BLCA 3149776 - 3149756 3149796 41 GGTGGCTGCTGGGTTGGCTTCTTCTTCAGAGGCCCATGAAC GGTGGCTGCTGGGTTGGCTTTTTCTTCAGAGGCCCATGAAC Direct Gain 0 0.960281051111118 0 0.924548804759979 prediction 0.920562102222237 Functional Gain - HTT ENSG00000197386 CDS Human protein_coding chr4:3149776 chr4:3149776 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_104040 0 0 0 0 0 Cytosol 0 0.438747620009712 0.849097609519958 0 hPsi_site_3000 iPseU_CNN:0.849097609519958;iRNA_PseU:0 3001 chr20 43945404 43945404 1 + C A HNSC 43945404 - 43945384 43945424 41 ACCAGGCTCATGGGGATTGTGATGGGAGCGCGCAGCCAGCG ACCAGGCTCATGGGGATTGTTATGGGAGCGCGCAGCCAGCG Direct Gain 0 0.960274068072703 0 0.995806515216827 prediction 0.920548136145406 Functional Gain - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43945404 chr20:43945404 nonsynonymous SNV 0.875 1 21 hPsi_associated_SNPs_104041 0 0 0 0 0 unknown 0 0.438682327183764 0.991613030433654 0 hPsi_site_3001 iPseU_CNN:0.991613030433654;iRNA_PseU:0 3002 chr2 88478423 88478423 1 + G T UCEC 88478423 + 88478403 88478443 41 TGGTCCCGGGTCCTGGTGCAGATGGCCCATCACTTCTTTGC TGGTCCCGGGTCCTGGTGCATATGGCCCATCACTTCTTTGC Direct Gain 0 0.960273864269759 0 0.912650108337402 prediction 0.920547728539518 Functional Gain - THNSL2 ENSG00000144115 CDS Human protein_coding chr2:88478423 chr2:88478423 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_104042 0 0 0 0 0 exosome 0 0.438718574942187 0.825300216674804 0 hPsi_site_3002 iPseU_CNN:0.825300216674804;iRNA_PseU:0 3003 chr4 1804776 1804776 1 + C T UCEC 1804776 + 1804756 1804796 41 AGGCCTTTTGGCTGAGCGTTCACGGGCCCCGAGCAGGTAAC AGGCCTTTTGGCTGAGCGTTTACGGGCCCCGAGCAGGTAAC Direct Gain 0 0.960266973083056 0 0.999908804893494 prediction 0.920533946166112 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1804776 chr4:1804776 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_104043 0 0 1 0 1 Ribosome 0 0.438718593055026 0.999817609786988 0 hPsi_site_3003 iPseU_CNN:0.999817609786988;iRNA_PseU:0 3004 chr12 52435691 52435691 1 + G A rs7316491 52435691 - 52435671 52435711 41 CTCTGGATGGACCAACAGGCCTTGGCCAACCACATTATCCC CTCTGGATGGACCAACAGGCTTTGGCCAACCACATTATCCC Direct Gain 0 0.960258431676418 0 0.552404284477234 prediction 0.920516863352836 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52435691 chr12:52435691 synonymous SNV . 0 21 hPsi_associated_SNPs_104044 0 0 0 0 0 Endoplasmic reticulum 0 0.4387185929951 0.104808568954468 0 hPsi_site_3004 iPseU_CNN:0.104808568954468;iRNA_PseU:0 3005 chr5 143853578 143853578 1 + G A OV 143853578 - 143853558 143853598 41 AGGAAATCCTGGATACATTTCTCCAGCTCCTCCTCAATTGA AGGAAATCCTGGATACATTTTTCCAGCTCCTCCTCAATTGA Direct Gain 0 0.960249353140076 0 0.974903106689453 prediction 0.920498706280152 Functional Gain - KCTD16 ENSG00000183775 CDS Human protein_coding chr5:143853578 chr5:143853578 synonymous SNV . 0 21 hPsi_associated_SNPs_104045 0 0 0 0 0 exosome 0 0.438716063253267 0.949806213378906 0 hPsi_site_3005 iPseU_CNN:0.949806213378906;iRNA_PseU:0 3006 chr11 58695112 58695112 1 + C T rs516803 58695112 + 58695092 58695132 41 GCGGAGTTTTAGTTTTTTCTCACTGCTTGCTTGGCAATGCA GCGGAGTTTTAGTTTTTTCTTACTGCTTGCTTGGCAATGCA Direct Gain 0 0.960239869728321 0 0.891174256801605 prediction 0.920479739456642 Functional Gain - GLYATL1 ENSG00000255523 ncRNA_intronic Human antisense chr11:58695112 chr11:58695112 . . 0 21 hPsi_associated_SNPs_104046 0 0 0 0 0 exosome 0 0.437658570552519 0.78234851360321 0 hPsi_site_3006 iPseU_CNN:0.78234851360321;iRNA_PseU:0 3007 chr12 11992136 11992136 1 + G A LUAD 11992136 - 11992116 11992156 41 AATTGGCCTTAAAGAAAACTCATTTTCAGCCCACTTGAGCC AATTGGCCTTAAAGAAAACTTATTTTCAGCCCACTTGAGCC Direct Gain 0 0.960236914034793 0 0.823607921600342 prediction 0.920473828069587 Functional Gain - ETV6 ENSG00000139083 CDS Human protein_coding chr12:11992136 chr12:11992136 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104047 0 0 0 0 0 Cytosol 0 0.438718597839575 0.647215843200684 0 hPsi_site_3007 iPseU_CNN:0.647215843200684;iRNA_PseU:0 3008 chr19 16855875 16855875 1 + C T rs146905478 16855875 + 16855855 16855895 41 GGAAAGAGGTTTAATGGACTCACAATTCCACATGGCTGGGG GGAAAGAGGTTTAATGGACTTACAATTCCACATGGCTGGGG Direct Gain 0 0.960234136889057 0 0.99998927116394 prediction 0.920468273778113 Functional Gain - NWD1 ENSG00000188039 CDS Human protein_coding chr19:16855875 chr19:16855875 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_104048 0 0 0 0 1 exosome 0 0.438718593084131 0.99997854232788 0 hPsi_site_3008 iPseU_CNN:0.99997854232788;iRNA_PseU:0 3009 chr4 47578845 47578845 1 + C A OV 47578845 - 47578825 47578865 41 AAACCCAGTAATCAGTCATGGATGTTCCTGAAAATCCACAA AAACCCAGTAATCAGTCATGTATGTTCCTGAAAATCCACAA Direct Gain 0 0.96021569340782 0 0.931968510150909 prediction 0.920431386815639 Functional Gain - ATP10D ENSG00000145246 CDS Human protein_coding chr4:47578845 chr4:47578845 nonsynonymous SNV 0.976 3 21 hPsi_associated_SNPs_104049 0 0 0 0 0 exosome 0 0.438748932446593 0.863937020301818 0 hPsi_site_3009 iPseU_CNN:0.863937020301818;iRNA_PseU:0 3010 chr7 117834753 117834753 1 + G A rs114696065 117834753 - 117834733 117834773 41 TTACAAAGGGCCTTTACTTTCTCATTCCCATGATGAATCTC TTACAAAGGGCCTTTACTTTTTCATTCCCATGATGAATCTC Direct Gain 0 0.960214336470533 0 0.0257653892040253 prediction 0.920428672941067 Functional Gain - LSM8 ENSG00000128534;ENSG00000106013 intergenic Human other chr7:117834753 chr7:117834753 . . 0 21 hPsi_associated_SNPs_104050 0 0 0 0 0 Ribosome 0 0.438707616808594 0 0 hPsi_site_3010 iPseU_CNN:0;iRNA_PseU:0 3011 chr12 104733018 104733018 1 + C A UCEC 104733018 - 104732998 104733038 41 GGGTGGATTCCAATTGTGCTGTCCAGCTGCTTTTTGGTCAG GGGTGGATTCCAATTGTGCTTTCCAGCTGCTTTTTGGTCAG Direct Gain 0 0.960204201912254 0 0.838653922080994 prediction 0.920408403824509 Functional Gain - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104733018 chr12:104733018 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104051 0 0 0 0 0 Ribosome 0 0.437946878713469 0.677307844161988 0 hPsi_site_3011 iPseU_CNN:0.677307844161988;iRNA_PseU:0 3012 chr9 137020841 137020841 1 + G A UCEC 137020841 - 137020821 137020861 41 AATATGCAGTATTTCTCATTCTTGTGGCCAGTGTACGTCTT AATATGCAGTATTTCTCATTTTTGTGGCCAGTGTACGTCTT Direct Gain 0 0.960197756115266 0 0.280777901411057 prediction 0.920395512230531 Functional Gain - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137020841 chr9:137020841 synonymous SNV . 0 21 hPsi_associated_SNPs_104052 0 0 0 0 0 Cytosol 0 0.438849923342759 0 0 hPsi_site_3012 iPseU_CNN:0;iRNA_PseU:0 3013 chr2 1271203 1271203 1 + G A CESC 1271203 - 1271183 1271223 41 GCAATAGGGCCTCTGGTCCTCAAAGTCAAAATCTTGAAGAC GCAATAGGGCCTCTGGTCCTTAAAGTCAAAATCTTGAAGAC Direct Gain 0 0.960192507649215 0 0.999889492988586 prediction 0.920385015298431 Functional Gain - SNTG2 ENSG00000172554 CDS Human protein_coding chr2:1271203 chr2:1271203 nonsynonymous SNV 0.202 0 21 hPsi_associated_SNPs_104053 0 0 0 0 0 exosome 0 0.438718593836161 0.999778985977172 0 hPsi_site_3013 iPseU_CNN:0.999778985977172;iRNA_PseU:0 3014 chr17 66127109 66127109 1 + G T rs549035922 66127109 + 66127089 66127129 41 ATGACAGAATTTTAAAAAGTGTTACTTTGCAACCACCAATG ATGACAGAATTTTAAAAAGTTTTACTTTGCAACCACCAATG Direct Gain 0 0.960158547979661 0 0.964728713035583 prediction 0.920317095959323 Functional Gain - LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66127109 chr17:66127109 . . 0 21 hPsi_associated_SNPs_104054 0 0 0 0 0 unknown 0 0.438959326566958 0.929457426071166 0 hPsi_site_3014 iPseU_CNN:0.929457426071166;iRNA_PseU:0 3015 chr2 173335803 173335803 1 + C A UCEC 173335803 - 173335783 173335823 41 GTTAGCAGGAACAGGAACGAGACTTTCATCATGCTCAGTCT GTTAGCAGGAACAGGAACGATACTTTCATCATGCTCAGTCT Direct Gain 0 0.960155247624254 0 0.999908685684204 prediction 0.920310495248507 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173335803 chr2:173335803 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_104055 0 0 0 0 0 Nucleus 0 0.438701543674567 0.999817371368408 0 hPsi_site_3015 iPseU_CNN:0.999817371368408;iRNA_PseU:0 3016 chr12 8051508 8051508 1 + G T UCEC 8051508 + 8051488 8051528 41 GAAGACGTGTGAAGATGAGTGAAATTGATGTTACTCAGTTT GAAGACGTGTGAAGATGAGTTAAATTGATGTTACTCAGTTT Direct Gain 0 0.960151435137574 0 0.937405705451965 prediction 0.920302870275149 Functional Gain - SLC2A14;SLC2A3 ENSG00000176654 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr12:8051508 chr12:8051508 . . 0 21 hPsi_associated_SNPs_104056 0 0 0 0 0 unknown 0 0.454457787167205 0.87481141090393 0 hPsi_site_3016 iPseU_CNN:0.87481141090393;iRNA_PseU:0 3017 chr17 20224837 20224837 1 + G A UCEC 20224837 - 20224817 20224857 41 GACATCGTGCTGGGGCTGGTCTAAGGCGCCCTCACCGTGCT GACATCGTGCTGGGGCTGGTTTAAGGCGCCCTCACCGTGCT Direct Gain 0 0.960150490869392 0 0.999799370765686 prediction 0.920300981738784 Functional Gain - CCDC144CP ENSG00000154898 ncRNA_exonic Human transcribed_processed_pseudogene chr17:20224837 chr17:20224837 . . 0 21 hPsi_associated_SNPs_104057 0 0 0 0 0 unknown 0 0.438718222525371 0.999598741531372 0 hPsi_site_3017 iPseU_CNN:0.999598741531372;iRNA_PseU:0 3018 chr15 93528746 93528746 1 + G A OV 93528746 - 93528726 93528766 41 CTTAGACTCAGTGTCAGAGTCACTGTCATTTGTCTGAGCCT CTTAGACTCAGTGTCAGAGTTACTGTCATTTGTCTGAGCCT Direct Gain 0 0.960148215641678 0 0.999085605144501 prediction 0.920296431283355 Functional Gain - CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528746 chr15:93528746 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_104058 0 0 0 0 0 Nucleus 0 0.437222055053624 0.998171210289002 0 hPsi_site_3018 iPseU_CNN:0.998171210289002;iRNA_PseU:0 3019 chr19 6908754 6908754 1 + G A SKCM 6908754 - 6908734 6908774 41 AACTACGGTCGTTTTATTTTCACACACTTTGTCCAGAACGC AACTACGGTCGTTTTATTTTTACACACTTTGTCCAGAACGC Direct Gain 0 0.960144192542455 0 0.429009705781937 prediction 0.92028838508491 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6908754 chr19:6908754 nonsynonymous SNV 0.053 0 21 hPsi_associated_SNPs_104059 0 0 0 0 0 exosome 0 0.438700288678111 0 0 hPsi_site_3019 iPseU_CNN:0;iRNA_PseU:0 3020 chr14 71413676 71413676 1 + G T LIHC 71413676 + 71413656 71413696 41 GTAGCAGTTTATTGTCCTGTGATAGCTGCTGTTTTCATTGT GTAGCAGTTTATTGTCCTGTTATAGCTGCTGTTTTCATTGT Direct Gain 0 0.960141921357023 0 0.996029138565063 prediction 0.920283842714046 Functional Gain - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71413676 chr14:71413676 synonymous SNV . 0 21 hPsi_associated_SNPs_104060 0 0 1 0 1 Endoplasmic reticulum 0 0.436238845330058 0.992058277130126 0 hPsi_site_3020 iPseU_CNN:0.992058277130126;iRNA_PseU:0 3021 chr11 56805652 56805652 1 + C A rs72472124 56805652 - 56805632 56805672 41 AGGACATATATGCAGGAAATGATGACCACCATCACAGTGCA AGGACATATATGCAGGAAATTATGACCACCATCACAGTGCA Direct Gain 0 0.960132454836929 0 0.354584991931915 prediction 0.920264909673858 Functional Gain - OR5AK4P ENSG00000224196 downstream Human other chr11:56805652 chr11:56805652 . . 0 21 hPsi_associated_SNPs_104061 0 0 0 0 0 unknown 0 0.438718621096638 0 0 hPsi_site_3021 iPseU_CNN:0;iRNA_PseU:0 3022 chr3 194501758 194501758 1 + C T rs59960312 194501758 + 194501738 194501778 41 GGACCAGACTTGCAGGTAGACATTCACCAATGCGTGATTTG GGACCAGACTTGCAGGTAGATATTCACCAATGCGTGATTTG Direct Gain 0 0.960132251730095 0 0.979487061500549 prediction 0.920264503460189 Functional Gain - LINC01968 ENSG00000237222 ncRNA_exonic Human lincRNA chr3:194501758 chr3:194501758 . . 0 21 hPsi_associated_SNPs_104062 0 0 0 0 0 unknown 0 0.43914052605566 0.958974123001098 0 hPsi_site_3022 iPseU_CNN:0.958974123001098;iRNA_PseU:0 3023 chr11 59282910 59282910 1 + C A ESCA 59282910 - 59282890 59282930 41 GGGACATCGCAGTAGAAAGTGTCAAGAACATTGGGTCCACA GGGACATCGCAGTAGAAAGTTTCAAGAACATTGGGTCCACA Direct Gain 0 0.960131781850693 0 0.28287547826767 prediction 0.920263563701387 Functional Gain - OR4D9 ENSG00000172742 CDS Human protein_coding chr11:59282910 chr11:59282910 nonsynonymous SNV 0.312 3 21 hPsi_associated_SNPs_104063 0 0 0 0 0 unknown 0 0.438719483321973 0 0 hPsi_site_3023 iPseU_CNN:0;iRNA_PseU:0 3024 chr1 119934814 119934814 1 + G T BLCA 119934814 + 119934794 119934834 41 GCGGGGTCCGAACTGGCAATGATGTGCTGAAGGCTCTGGCC GCGGGGTCCGAACTGGCAATTATGTGCTGAAGGCTCTGGCC Direct Gain 0 0.960125060475385 0 0.999999105930328 prediction 0.920250120950771 Functional Gain - HAO2 ENSG00000116882 CDS Human protein_coding chr1:119934814 chr1:119934814 nonsynonymous SNV 0.970 4 21 hPsi_associated_SNPs_104064 0 0 0 0 2 cytosol 0 0.43871859296888 0.999998211860656 0 hPsi_site_3024 iPseU_CNN:0.999998211860656;iRNA_PseU:0 3025 chrX 35820745 35820745 1 + C A UCEC 35820745 - 35820725 35820765 41 AAGTGGCTCTCATCATCTTTGATGATAATCTTCAACATATC AAGTGGCTCTCATCATCTTTTATGATAATCTTCAACATATC Direct Gain 0 0.96012499386599 0 0.780070662498474 prediction 0.920249987731981 Functional Gain - MAGEB16 ENSG00000189023 CDS Human protein_coding chrX:35820745 chrX:35820745 synonymous SNV . 0 21 hPsi_associated_SNPs_104065 0 0 0 0 0 exosome 0 0.438718589766226 0.560141324996948 0 hPsi_site_3025 iPseU_CNN:0.560141324996948;iRNA_PseU:0 3026 chr17 51901966 51901966 1 + G A LUSC 51901966 - 51901946 51901986 41 AGAGTGTTTTCACAAGAGGTCATCCCCGGAGAGATGGTAGC AGAGTGTTTTCACAAGAGGTTATCCCCGGAGAGATGGTAGC Direct Gain 0 0.960122632490228 0 0.910176038742065 prediction 0.920245264980456 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901966 chr17:51901966 nonsynonymous SNV 0.901 0 21 hPsi_associated_SNPs_104066 0 0 0 0 0 exosome 0 0.438718593094313 0.82035207748413 0 hPsi_site_3026 iPseU_CNN:0.82035207748413;iRNA_PseU:0 3027 chr1 182763569 182763569 1 + G A OV 182763569 - 182763549 182763589 41 CCAAATGATAGTTACCCATTCTCAGTCATTGGCGTGATGGT CCAAATGATAGTTACCCATTTTCAGTCATTGGCGTGATGGT Direct Gain 0 0.960113868035452 0 0.0460053384304047 prediction 0.920227736070904 Functional Gain - NPL ENSG00000135838 CDS Human protein_coding chr1:182763569 chr1:182763569 synonymous SNV . 0 21 hPsi_associated_SNPs_104067 0 0 0 0 0 Cytosol 0 0.438720655499065 0 0 hPsi_site_3027 iPseU_CNN:0;iRNA_PseU:0 3028 chr8 104337352 104337352 1 + G T SARC 104337352 + 104337332 104337372 41 GAACACCAGGTTTCCTGACTGTTATGCTTCTTGCTATGAAC GAACACCAGGTTTCCTGACTTTTATGCTTCTTGCTATGAAC Direct Gain 0 0.960109905180924 0 0.988017559051514 prediction 0.920219810361848 Functional Gain - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104337352 chr8:104337352 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_104068 0 0 1 0 1 Ribosome 0 0.438711781667695 0.976035118103028 0 hPsi_site_3028 iPseU_CNN:0.976035118103028;iRNA_PseU:0 3029 chr1 18152816 18152816 1 + C A LUAD 18152816 - 18152796 18152836 41 GTGAACCCGGGATAGAGGGTGTTGCCCCCGCAGGCCATCAC GTGAACCCGGGATAGAGGGTTTTGCCCCCGCAGGCCATCAC Direct Gain 0 0.960108252555931 0 0.954123377799988 prediction 0.920216505111862 Functional Gain - ACTL8 ENSG00000117148 CDS Human protein_coding chr1:18152816 chr1:18152816 nonsynonymous SNV 0.900 2 21 hPsi_associated_SNPs_104069 0 0 0 0 0 unknown 0 0.438718590191359 0.908246755599976 0 hPsi_site_3029 iPseU_CNN:0.908246755599976;iRNA_PseU:0 3030 chr19 31039334 31039334 1 + G A BRCA 31039334 - 31039314 31039354 41 TCAGCCAGGGCTTTGTCCTTCATGTCCTTCTCCTTCTTCAA TCAGCCAGGGCTTTGTCCTTTATGTCCTTCTCCTTCTTCAA Direct Gain 0 0.960092749899373 0 0.993184447288513 prediction 0.920185499798746 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31039334 chr19:31039334 nonsynonymous SNV 0.268 0 21 hPsi_associated_SNPs_104070 0 0 0 0 0 exosome 0 0.438718592995102 0.986368894577026 0 hPsi_site_3030 iPseU_CNN:0.986368894577026;iRNA_PseU:0 3031 chr11 67201670 67201670 1 + G T UCEC 67201670 + 67201650 67201690 41 GTGCATTCTCTACCTACAGAGACATCCCTTTTTCCGGCACA GTGCATTCTCTACCTACAGATACATCCCTTTTTCCGGCACA Direct Gain 0 0.960068325425789 0 0.999892234802246 prediction 0.920136650851578 Functional Gain - RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201670 chr11:67201670 nonsynonymous SNV 0.649 1 21 hPsi_associated_SNPs_104071 0 0 1 0 2 Ribosome 0 0.438718232693911 0.999784469604492 0 hPsi_site_3031 iPseU_CNN:0.999784469604492;iRNA_PseU:0 3032 chr14 24618693 24618693 1 + G A COAD 24618693 - 24618673 24618713 41 ACAGGTGGTCACAGGCTGGACACAGGGCCTGTTTACAGGAT ACAGGTGGTCACAGGCTGGATACAGGGCCTGTTTACAGGAT Direct Gain 0 0.960056075142208 0 0.783661007881165 prediction 0.920112150284416 Functional Gain - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24618693 chr14:24618693 nonsynonymous SNV 0.305 4 21 hPsi_associated_SNPs_104072 0 0 0 0 0 Ribosome 0 0.438718592995173 0.56732201576233 0 hPsi_site_3032 iPseU_CNN:0.56732201576233;iRNA_PseU:0 3033 chr1 160165289 160165289 1 + C A LUSC 160165289 - 160165269 160165309 41 GGCGAAGAAGGGGATGTAGGGATGAAACTCCTCAGCTGCAT GGCGAAGAAGGGGATGTAGGTATGAAACTCCTCAGCTGCAT Direct Gain 0 0.960041495032893 0 0.999999761581421 prediction 0.920082990065786 Functional Gain - CASQ1 ENSG00000143318 CDS Human protein_coding chr1:160165289 chr1:160165289 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_104073 0 0 1 0 0 exosome 0 0.438718584290205 0.999999523162842 0 hPsi_site_3033 iPseU_CNN:0.999999523162842;iRNA_PseU:0 3034 chr5 149751685 149751685 1 + C T SKCM 149751685 + 149751665 149751705 41 GGGGATGTGACACCCCAGGTCAAAGGAGGGGCCCTGCCCCC GGGGATGTGACACCCCAGGTTAAAGGAGGGGCCCTGCCCCC Direct Gain 0 0.960037284373709 0 0.799277424812317 prediction 0.920074568747418 Functional Gain - TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751685 chr5:149751685 synonymous SNV . 0 21 hPsi_associated_SNPs_104074 0 0 1 0 0 Nucleus 0 0.438718592989062 0.598554849624634 0 hPsi_site_3034 iPseU_CNN:0.598554849624634;iRNA_PseU:0 3035 chr17 60766290 60766290 1 + G A SKCM 60766290 - 60766270 60766310 41 TGGCAGATGAAGCCATGGGTCTCCTCCGTGCAGCTCCGATC TGGCAGATGAAGCCATGGGTTTCCTCCGTGCAGCTCCGATC Direct Gain 0 0.960031881273748 0 0.995778322219849 prediction 0.920063762547496 Functional Gain - MRC2 ENSG00000011028 CDS Human protein_coding chr17:60766290 chr17:60766290 nonsynonymous SNV 0.987 0 21 hPsi_associated_SNPs_104075 0 0 0 0 0 Cytosol 0 0.438692244315509 0.991556644439698 0 hPsi_site_3035 iPseU_CNN:0.991556644439698;iRNA_PseU:0 3036 chr19 45541414 45541414 1 + G T rs10856 45541414 + 45541394 45541434 41 AGGTGGGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAA AGGTGGGGGGTAGGTTGGTTTTTCAGAGTCTTCCCAATAAA Direct Gain 0 0.960031523438602 0 0.433274924755096 prediction 0.920063046877203 Functional Gain - RELB ENSG00000104856 UTR3 Human protein_coding chr19:45541414 chr19:45541414 . . 0 21 hPsi_associated_SNPs_104076 0 0 1 1 0 Cytosol 0 0.438718592995103 0 0 hPsi_site_3036 iPseU_CNN:0;iRNA_PseU:0 3037 chr12 122353776 122353776 1 + G T STAD 122353776 + 122353756 122353796 41 TTTCAGAAGCCCCTGAATGTGACAGTGATCCGCAGGGGGGA TTTCAGAAGCCCCTGAATGTTACAGTGATCCGCAGGGGGGA Direct Gain 0 0.960019804481849 0 0.998277485370636 prediction 0.920039608963697 Functional Gain - PSMD9 ENSG00000110801 CDS Human protein_coding chr12:122353776 chr12:122353776 synonymous SNV . 0 21 hPsi_associated_SNPs_104077 0 0 1 0 2 Ribosome 0 0.438729081016474 0.996554970741272 0 hPsi_site_3037 iPseU_CNN:0.996554970741272;iRNA_PseU:0 3038 chr17 13928384 13928384 1 + C T COAD 13928384 + 13928364 13928404 41 GGAGCTGCCTGAAATCACGGCACGTACTGTAGCCACTGGCC GGAGCTGCCTGAAATCACGGTACGTACTGTAGCCACTGGCC Direct Gain 0 0.960017149939063 0 0.99962055683136 prediction 0.920034299878126 Functional Gain - CDRT15P1 ENSG00000141028 ncRNA_splicing Human unprocessed_pseudogene chr17:13928384 chr17:13928384 . . 0 21 hPsi_associated_SNPs_104078 0 0 0 1 0 unknown 0 0.438718532162688 0.99924111366272 0 hPsi_site_3038 iPseU_CNN:0.99924111366272;iRNA_PseU:0 3039 chr1 228505428 228505428 1 + C T BLCA 228505428 + 228505408 228505448 41 TGGGTGCTGGGGAACCGGTTCACCTGCCCCAGACAGTGCGG TGGGTGCTGGGGAACCGGTTTACCTGCCCCAGACAGTGCGG Direct Gain 0 0.960017070356335 0 0.998836636543274 prediction 0.920034140712671 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228505428 chr1:228505428 nonsynonymous SNV 0.123 0 21 hPsi_associated_SNPs_104079 0 0 0 0 1 Ribosome 0 0.43871838062827 0.997673273086548 0 hPsi_site_3039 iPseU_CNN:0.997673273086548;iRNA_PseU:0 3040 chr11 45246027 45246027 1 + C A UCEC 45246027 - 45246007 45246047 41 GCGTCATCCTGGTATTTGGGGACTTTCCTGATGACCAGTGA GCGTCATCCTGGTATTTGGGTACTTTCCTGATGACCAGTGA Direct Gain 0 0.960015579151098 0 0.999982237815857 prediction 0.920031158302196 Functional Gain - PRDM11 ENSG00000019485 CDS Human protein_coding chr11:45246027 chr11:45246027 synonymous SNV . 0 21 hPsi_associated_SNPs_104080 0 0 0 0 0 cytosol 0 0.438718581645916 0.999964475631714 0 hPsi_site_3040 iPseU_CNN:0.999964475631714;iRNA_PseU:0 3041 chr2 120718482 120718482 1 + G A KIRC 120718482 - 120718462 120718502 41 CATTACAACCATAGAGGAGCCTTGTTCCCAAGTCATCTGCC CATTACAACCATAGAGGAGCTTTGTTCCCAAGTCATCTGCC Direct Gain 0 0.959999384207452 0 0.479263961315155 prediction 0.919998768414904 Functional Gain - PTPN4 ENSG00000088179 CDS Human protein_coding chr2:120718482 chr2:120718482 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104081 0 0 0 0 0 Nucleus 0 0.438718589685553 0 0 hPsi_site_3041 iPseU_CNN:0;iRNA_PseU:0 3042 chr17 37075351 37075351 1 + C T rs553425785 37075351 + 37075331 37075371 41 GCCCCTCTGTTCTCTCCCCTCACATCCTCCTGCCCAGCTCC GCCCCTCTGTTCTCTCCCCTTACATCCTCCTGCCCAGCTCC Direct Gain 0 0.959997622750989 0 0.0165325701236725 prediction 0.919995245501978 Functional Gain - LASP1 ENSG00000265784 ncRNA_intronic Human antisense chr17:37075351 chr17:37075351 . . 0 21 hPsi_associated_SNPs_104082 0 0 1 0 0 Cytosol 0 0.438718646154746 0 0 hPsi_site_3042 iPseU_CNN:0;iRNA_PseU:0 3043 chr3 4847868 4847868 1 + G T SARC 4847868 + 4847848 4847888 41 GCTACCGAGCCATGGTTCTGGATGTTGAGTTCCTCTATCAT GCTACCGAGCCATGGTTCTGTATGTTGAGTTCCTCTATCAT Direct Gain 0 0.959992321191788 0 0.994458079338074 prediction 0.919984642383575 Functional Gain - ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4847868 chr3:4847868 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104083 0 0 1 0 2 Endoplasmic reticulum 0 0.438713203219497 0.988916158676148 0 hPsi_site_3043 iPseU_CNN:0.988916158676148;iRNA_PseU:0 3044 chr19 54943050 54943050 1 + G T rs548101676 54943050 + 54943030 54943070 41 AGGACGAGTTTTTTTTGTTTGTTTTTTTTTCACTGGATGGC AGGACGAGTTTTTTTTGTTTTTTTTTTTTTCACTGGATGGC Direct Gain 0 0.959990695464767 0 0.277468055486679 prediction 0.919981390929535 Functional Gain - TTYH1 ENSG00000227407 ncRNA_intronic Human antisense chr19:54943050 chr19:54943050 . . 0 21 hPsi_associated_SNPs_104084 0 0 0 1 0 cytosol 0 0.438040513514723 0 0 hPsi_site_3044 iPseU_CNN:0;iRNA_PseU:0 3045 chr11 7663623 7663623 1 + C A rs577193193 7663623 - 7663603 7663643 41 GGAGTCCCTGGTCCTAGAGAGTCTTGGCCCTGCGGTTGCCC GGAGTCCCTGGTCCTAGAGATTCTTGGCCCTGCGGTTGCCC Direct Gain 0 0.959990629694249 0 0.932753562927246 prediction 0.919981259388497 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7663623 chr11:7663623 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_104085 0 0 0 0 0 Cytosol 0 0.438718592995102 0.865507125854492 0 hPsi_site_3045 iPseU_CNN:0.865507125854492;iRNA_PseU:0 3046 chr3 183369003 183369003 1 + G A BLCA 183369003 - 183368983 183369023 41 TATGTGGTACCGTCTTGCTTCATGCAACAACTGATAACACT TATGTGGTACCGTCTTGCTTTATGCAACAACTGATAACACT Direct Gain 0 0.959985796607214 0 0.967383742332458 prediction 0.919971593214427 Functional Gain - KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369003 chr3:183369003 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_104086 0 0 0 0 0 Ribosome 0 0.430464403729479 0.934767484664916 0 hPsi_site_3046 iPseU_CNN:0.934767484664916;iRNA_PseU:0 3047 chr15 22929869 22929869 1 + G A HNSC 22929869 - 22929849 22929889 41 TACGCTGAGTGGTCGTTCTTCACACTGCACTTCATGTTCTT TACGCTGAGTGGTCGTTCTTTACACTGCACTTCATGTTCTT Direct Gain 0 0.959979056532187 0 0.998258709907532 prediction 0.919958113064374 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22929869 chr15:22929869 synonymous SNV . 0 21 hPsi_associated_SNPs_104087 0 0 0 0 0 Cytosol 0 0.438736743082141 0.996517419815064 0 hPsi_site_3047 iPseU_CNN:0.996517419815064;iRNA_PseU:0 3048 chr1 45232826 45232826 1 + T A GBM 45232826 - 45232806 45232846 41 GGGGCCGTTTCTTGCTGCTTATTTGTCTGCTAGCCTGCTCT GGGGCCGTTTCTTGCTGCTTTTTTGTCTGCTAGCCTGCTCT Direct Gain 0 0.959974434197371 0 0.345667123794556 prediction 0.919948868394741 Functional Gain - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45232826 chr1:45232826 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_104088 0 0 0 0 0 Nucleus 0 0.438718592366968 0 0 hPsi_site_3048 iPseU_CNN:0;iRNA_PseU:0 3049 chr14 70925924 70925924 1 + G T BLCA 70925924 + 70925904 70925944 41 TTCAATGTGAGAATGTGAGAGACATTCCTCTTCTCCAAGAT TTCAATGTGAGAATGTGAGATACATTCCTCTTCTCCAAGAT Direct Gain 0 0.959968887064332 0 0.999701023101807 prediction 0.919937774128664 Functional Gain - ADAM21 ENSG00000139985 CDS Human protein_coding chr14:70925924 chr14:70925924 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104089 0 0 0 0 0 exosome 0 0.438920587935561 0.999402046203614 0 hPsi_site_3049 iPseU_CNN:0.999402046203614;iRNA_PseU:0 3050 chr11 4661230 4661230 1 + G A rs149586591 4661230 - 4661210 4661250 41 GCCAGGAAGAGGTACATGGGCTCATGCAGTCGCCTCTCCAC GCCAGGAAGAGGTACATGGGTTCATGCAGTCGCCTCTCCAC Direct Gain 0 0.959966621666149 0 0.998284041881561 prediction 0.919933243332298 Functional Gain - OR51D1 ENSG00000197428 CDS Human protein_coding chr11:4661230 chr11:4661230 synonymous SNV . 0 21 hPsi_associated_SNPs_104090 0 0 0 0 0 unknown 0 0.438721071703165 0.996568083763122 0 hPsi_site_3050 iPseU_CNN:0.996568083763122;iRNA_PseU:0 3051 chr6 70866211 70866211 1 + G T rs200503721 70866211 + 70866191 70866231 41 CTTCCTCTGTCTTCTAGGGTGATATAGGGCCACGGGGTCCT CTTCCTCTGTCTTCTAGGGTTATATAGGGCCACGGGGTCCT Direct Gain 0 0.959963706646673 0 0.944194555282593 prediction 0.919927413293345 Functional Gain - COL19A1 ENSG00000082293 CDS Human protein_coding chr6:70866211 chr6:70866211 nonsynonymous SNV 0.198 3 21 hPsi_associated_SNPs_104091 0 0 0 0 1 exosome 0 0.438290221252134 0.888389110565186 0 hPsi_site_3051 iPseU_CNN:0.888389110565186;iRNA_PseU:0 3052 chr6 89855890 89855890 1 + G A SKCM 89855890 - 89855870 89855910 41 CCATTGCACGCGCCCCCTTCCACGGGCCGCTCCCCTCCGGG CCATTGCACGCGCCCCCTTCTACGGGCCGCTCCCCTCCGGG Direct Gain 0 0.959955043195115 0 0.999759316444397 prediction 0.91991008639023 Functional Gain - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89855890 chr6:89855890 synonymous SNV . 0 21 hPsi_associated_SNPs_104092 0 0 0 0 0 Ribosome 0 0.438897577540495 0.999518632888794 0 hPsi_site_3052 iPseU_CNN:0.999518632888794;iRNA_PseU:0 3053 chr19 10794784 10794784 1 + G T rs78629067 10794784 + 10794764 10794804 41 TTTTTGCGGTGATTAGGTCAGACGGCCCTCGACCCCCACCC TTTTTGCGGTGATTAGGTCATACGGCCCTCGACCCCCACCC Direct Gain 0 0.959953449180737 0 0.992708206176758 prediction 0.919906898361474 Functional Gain - ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10794784 chr19:10794784 . . 0 21 hPsi_associated_SNPs_104093 0 0 1 2 0 Cytosol 0 0.438718592995106 0.985416412353516 0 hPsi_site_3053 iPseU_CNN:0.985416412353516;iRNA_PseU:0 3054 chr12 109604733 109604733 1 + G T COAD 109604733 + 109604713 109604753 41 AGAAGCTGGACCTGCACAGAGACTTTACCGTGGCTTCTCCC AGAAGCTGGACCTGCACAGATACTTTACCGTGGCTTCTCCC Direct Gain 0 0.959952737981671 0 0.99999988079071 prediction 0.919905475963341 Functional Gain - ACACB ENSG00000076555 CDS Human protein_coding chr12:109604733 chr12:109604733 nonsynonymous SNV 0.924 3 21 hPsi_associated_SNPs_104094 0 0 0 0 2 Nucleus 0 0.438718599927764 0.99999976158142 0 hPsi_site_3054 iPseU_CNN:0.99999976158142;iRNA_PseU:0 3055 chr3 3888296 3888296 1 + G A SKCM 3888296 - 3888276 3888316 41 GAGTGGTGGTAGTTTTTTCTCTTAAATCTTTTGGCAAAGTA GAGTGGTGGTAGTTTTTTCTTTTAAATCTTTTGGCAAAGTA Direct Gain 0 0.959949377385384 0 0.954348623752594 prediction 0.919898754770768 Functional Gain - LRRN1 ENSG00000175928 CDS Human protein_coding chr3:3888296 chr3:3888296 synonymous SNV . 0 21 hPsi_associated_SNPs_104095 0 0 0 0 0 Cytosol 0 0.438717603835509 0.908697247505188 0 hPsi_site_3055 iPseU_CNN:0.908697247505188;iRNA_PseU:0 3056 chr2 135711715 135711715 1 + C A UCEC 135711715 - 135711695 135711735 41 GGTGTGGTGGCGGCTTGAAGGATGCTCCTTGTGCTTCTCCT GGTGTGGTGGCGGCTTGAAGTATGCTCCTTGTGCTTCTCCT Direct Gain 0 0.959938050013251 0 0.999995112419128 prediction 0.919876100026501 Functional Gain - CCNT2 ENSG00000082258 CDS Human protein_coding chr2:135711715 chr2:135711715 nonsynonymous SNV 0.552 0 21 hPsi_associated_SNPs_104096 0 0 0 0 0 Nucleus 0 0.438724797178054 0.999990224838256 0 hPsi_site_3056 iPseU_CNN:0.999990224838256;iRNA_PseU:0 3057 chr10 71392716 71392716 1 + G T SARC 71392716 + 71392696 71392736 41 AACCATGCTGTGGAGCCGGTGACCTCCATCCTGCTCCTCTT AACCATGCTGTGGAGCCGGTTACCTCCATCCTGCTCCTCTT Direct Gain 0 0.959934773770062 0 0.999977588653564 prediction 0.919869547540125 Functional Gain - C10orf35 ENSG00000171224 CDS Human protein_coding chr10:71392716 chr10:71392716 synonymous SNV . 0 21 hPsi_associated_SNPs_104097 0 0 0 0 0 exosome 0 0.43871623147337 0.999955177307128 0 hPsi_site_3057 iPseU_CNN:0.999955177307128;iRNA_PseU:0 3058 chr10 24831868 24831868 1 + G A UCEC 24831868 - 24831848 24831888 41 GATGCATCAGAAATACTATTCTCCATTCCTCTTTCCCACTT GATGCATCAGAAATACTATTTTCCATTCCTCTTTCCCACTT Direct Gain 0 0.959926817299343 0 0.968408465385437 prediction 0.919853634598686 Functional Gain - KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24831868 chr10:24831868 synonymous SNV . 0 21 hPsi_associated_SNPs_104098 0 0 0 0 0 Nucleus 0 0.438718803900253 0.936816930770874 0 hPsi_site_3058 iPseU_CNN:0.936816930770874;iRNA_PseU:0 3059 chr1 13036648 13036648 1 + C T LUSC 13036648 + 13036628 13036668 41 AGGAATCTTCGCAAACTCTTCATCTCCGATGGCTGTCGTTA AGGAATCTTCGCAAACTCTTTATCTCCGATGGCTGTCGTTA Direct Gain 0 0.959926101321332 0 0.87935209274292 prediction 0.919852202642664 Functional Gain - PRAMEF18;PRAMEF22 ENSG00000204508 CDS Human other chr1:13036648 chr1:13036648 synonymous SNV . 0 21 hPsi_associated_SNPs_104099 0 0 0 0 0 unknown 0 0.438719305385598 0.75870418548584 0 hPsi_site_3059 iPseU_CNN:0.75870418548584;iRNA_PseU:0 3060 chr14 33290911 33290911 1 + G A LUAD 33290911 - 33290891 33290931 41 AAATGGCATGTGGTTGTCCTCATAGAGTTCAACATTGTGGA AAATGGCATGTGGTTGTCCTTATAGAGTTCAACATTGTGGA Direct Gain 0 0.959917673322725 0 0.250392735004425 prediction 0.91983534664545 Functional Gain - AKAP6 ENSG00000151320 CDS Human protein_coding chr14:33290911 chr14:33290911 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_104100 0 0 0 0 0 cytosol 0 0.438959197361081 0 0 hPsi_site_3060 iPseU_CNN:0;iRNA_PseU:0 3061 chr3 133098779 133098779 1 + C T SKCM 133098779 + 133098759 133098799 41 CAATCCCGATGGACCCCCCTCACAGGCTGCAGCTCCCATGG CAATCCCGATGGACCCCCCTTACAGGCTGCAGCTCCCATGG Direct Gain 0 0.959916830773128 0 0.999637484550476 prediction 0.919833661546257 Functional Gain - TMEM108 ENSG00000144868 CDS Human protein_coding chr3:133098779 chr3:133098779 nonsynonymous SNV 0.302 3 21 hPsi_associated_SNPs_104101 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593414495 0.999274969100952 0 hPsi_site_3061 iPseU_CNN:0.999274969100952;iRNA_PseU:0 3062 chr22 26701973 26701973 1 + C T LUSC 26701973 + 26701953 26701993 41 GGAGGGGCAGTGCACAATGCCACCATCGGCCGCGTCCTCTC GGAGGGGCAGTGCACAATGCTACCATCGGCCGCGTCCTCTC Direct Gain 0 0.959915831882294 0 0.978710949420929 prediction 0.919831663764588 Functional Gain - SEZ6L ENSG00000100095 CDS Human protein_coding chr22:26701973 chr22:26701973 synonymous SNV . 0 21 hPsi_associated_SNPs_104102 0 0 0 0 1 exosome 0 0.438655927956391 0.957421898841858 0 hPsi_site_3062 iPseU_CNN:0.957421898841858;iRNA_PseU:0 3063 chr11 48510551 48510551 1 + C A STAD 48510551 - 48510531 48510571 41 GAAATGGATGAAGAATAAATGATATCTATAAATGATAAGCC GAAATGGATGAAGAATAAATTATATCTATAAATGATAAGCC Direct Gain 0 0.959913786561534 0 0.999300360679626 prediction 0.919827573123068 Functional Gain - OR4A47 ENSG00000237388 CDS Human protein_coding chr11:48510551 chr11:48510551 synonymous SNV . 0 21 hPsi_associated_SNPs_104103 0 0 0 0 0 unknown 0 0.437468413099118 0.998600721359252 0 hPsi_site_3063 iPseU_CNN:0.998600721359252;iRNA_PseU:0 3064 chr1 1119336 1119336 1 + G A ESCA 1119336 - 1119316 1119356 41 AGGTAGGAGCGCACGTCAAACTTTCTCCCGTCCACCAGCAG AGGTAGGAGCGCACGTCAAATTTTCTCCCGTCCACCAGCAG Direct Gain 0 0.95991191198995 0 0.521110892295837 prediction 0.9198238239799 Functional Gain - TTLL10 ENSG00000162571 CDS Human protein_coding chr1:1119336 chr1:1119336 synonymous SNV . 0 21 hPsi_associated_SNPs_104104 0 0 0 0 0 exosome 0 0.438720951490169 0.0422217845916739 0 hPsi_site_3064 iPseU_CNN:0.0422217845916739;iRNA_PseU:0 3065 chr2 128364867 128364867 1 + C A ESCA 128364867 - 128364847 128364887 41 CTGCACAGGGCCTGCAGCTGGACTGTCCTCTGCCGCATGGC CTGCACAGGGCCTGCAGCTGTACTGTCCTCTGCCGCATGGC Direct Gain 0 0.959896720082061 0 0.388753116130829 prediction 0.919793440164122 Functional Gain - MYO7B ENSG00000169994 CDS Human protein_coding chr2:128364867 chr2:128364867 synonymous SNV . 0 21 hPsi_associated_SNPs_104105 0 0 0 0 0 exosome 0 0.433934397901236 0 0 hPsi_site_3065 iPseU_CNN:0;iRNA_PseU:0 3066 chr6 26370776 26370776 1 + C T UCEC 26370776 + 26370756 26370796 41 TCCGGGGAGGGTGTATCCTGCATCATCAGAAATTCCCTCCT TCCGGGGAGGGTGTATCCTGTATCATCAGAAATTCCCTCCT Direct Gain 0 0.95989538606925 0 0.87374222278595 prediction 0.9197907721385 Functional Gain - BTN3A2 ENSG00000186470 CDS Human protein_coding chr6:26370776 chr6:26370776 synonymous SNV . 0 21 hPsi_associated_SNPs_104106 0 0 1 0 1 Ribosome 0 0.438663756144119 0.7474844455719 0 hPsi_site_3066 iPseU_CNN:0.7474844455719;iRNA_PseU:0 3067 chr15 39881501 39881501 1 + C T SKCM 39881501 + 39881481 39881521 41 CTGCCCTGCCCCCCACGCTTCACCGGCTCACAGCCCTTCGG CTGCCCTGCCCCCCACGCTTTACCGGCTCACAGCCCTTCGG Direct Gain 0 0.959894288601442 0 0.475058674812317 prediction 0.919788577202884 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39881501 chr15:39881501 synonymous SNV . 0 21 hPsi_associated_SNPs_104107 0 0 1 0 2 cytosol 0 0.438690071255825 0 0 hPsi_site_3067 iPseU_CNN:0;iRNA_PseU:0 3068 chr9 71395453 71395453 1 + G T GBM 71395453 + 71395433 71395473 41 AGGAAAGTTTCAGCCTGAGTGACAACGACGTGGAGAAATCC AGGAAAGTTTCAGCCTGAGTTACAACGACGTGGAGAAATCC Direct Gain 0 0.959892331705402 0 0.999467849731445 prediction 0.919784663410804 Functional Gain - FAM122A ENSG00000187866 CDS Human protein_coding chr9:71395453 chr9:71395453 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104108 0 0 1 0 0 chromatin 0 0.43868653741413 0.99893569946289 0 hPsi_site_3068 iPseU_CNN:0.99893569946289;iRNA_PseU:0 3069 chr16 29675062 29675062 1 + C T LIHC 29675062 + 29675042 29675082 41 GCCTGGAAATGGCCACGCTTCTCCTTCTCCTTGGGGTGCTG GCCTGGAAATGGCCACGCTTTTCCTTCTCCTTGGGGTGCTG Direct Gain 0 0.959886028730502 0 0.999671041965485 prediction 0.919772057461005 Functional Gain - SPN ENSG00000197471 CDS Human protein_coding chr16:29675062 chr16:29675062 nonsynonymous SNV 0.012 0 21 hPsi_associated_SNPs_104109 0 0 1 0 1 chromatin 0 0.438718480011689 0.99934208393097 0 hPsi_site_3069 iPseU_CNN:0.99934208393097;iRNA_PseU:0 3070 chr19 41003504 41003504 1 + T A BLCA 41003504 - 41003484 41003524 41 GCGAGAGGCTCACCTTCAGGATCCAGCAGCCGCGCCAGCCC GCGAGAGGCTCACCTTCAGGTTCCAGCAGCCGCGCCAGCCC Direct Gain 0 0.95988519122737 0 0.996852934360504 prediction 0.919770382454741 Functional Gain - SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41003504 chr19:41003504 nonsynonymous SNV 0.989 2 21 hPsi_associated_SNPs_104110 0 0 0 0 0 cytosol 0 0.438726529896441 0.993705868721008 0 hPsi_site_3070 iPseU_CNN:0.993705868721008;iRNA_PseU:0 3071 chr3 124456735 124456735 1 + C T BLCA 124456735 + 124456715 124456755 41 ATGTCTTTGTGGCAGCGAATCATAATGGTTCTCCCCTTTCT ATGTCTTTGTGGCAGCGAATTATAATGGTTCTCCCCTTTCT Direct Gain 0 0.959882939273887 0 0.999312400817871 prediction 0.919765878547775 Functional Gain - UMPS ENSG00000114491 CDS Human protein_coding chr3:124456735 chr3:124456735 nonsynonymous SNV 0.421 0 21 hPsi_associated_SNPs_104111 0 0 1 0 0 Ribosome 0 0.4387796863971 0.998624801635742 0 hPsi_site_3071 iPseU_CNN:0.998624801635742;iRNA_PseU:0 3072 chr11 66031530 66031530 1 + T A COAD 66031530 - 66031510 66031550 41 GCTTGGCCACATCTGGGTGAAACTTGCCCAGGACCTGGGAT GCTTGGCCACATCTGGGTGATACTTGCCCAGGACCTGGGAT Direct Gain 0 0.959873241862969 0 0.999871253967285 prediction 0.919746483725938 Functional Gain - KLC2 ENSG00000174996 CDS Human protein_coding chr11:66031530 chr11:66031530 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104112 0 0 0 0 0 Ribosome 0 0.438719351948615 0.99974250793457 0 hPsi_site_3072 iPseU_CNN:0.99974250793457;iRNA_PseU:0 3073 chr22 21331049 21331049 1 + C T SKCM 21331049 + 21331029 21331069 41 GAGCGCGTGGGTCGAGCCCTCATGAAGGTGAGCCCACCCCA GAGCGCGTGGGTCGAGCCCTTATGAAGGTGAGCCCACCCCA Direct Gain 0 0.959865848343746 0 0.985345780849457 prediction 0.919731696687492 Functional Gain - AIFM3 ENSG00000183773 CDS Human protein_coding chr22:21331049 chr22:21331049 synonymous SNV . 0 21 hPsi_associated_SNPs_104113 0 0 0 0 1 exosome 0 0.43871825683979 0.970691561698914 0 hPsi_site_3073 iPseU_CNN:0.970691561698914;iRNA_PseU:0 3074 chr1 158435844 158435844 1 + C T LUAD 158435844 + 158435824 158435864 41 TCACCACCTCCCTAGTATTTCATCTGCCCTTCCACTCCTCC TCACCACCTCCCTAGTATTTTATCTGCCCTTCCACTCCTCC Direct Gain 0 0.95986227377386 0 0.675500988960266 prediction 0.919724547547719 Functional Gain - OR10K1 ENSG00000173285 CDS Human protein_coding chr1:158435844 chr1:158435844 nonsynonymous SNV 0.801 0 21 hPsi_associated_SNPs_104114 0 0 0 0 0 unknown 0 0.438718971983506 0.351001977920532 0 hPsi_site_3074 iPseU_CNN:0.351001977920532;iRNA_PseU:0 3075 chr3 169802272 169802272 1 + C T BLCA 169802272 + 169802252 169802292 41 GAAGGCACAGAATGCTTATTCTCGTCACTGTCCTTTCTATG GAAGGCACAGAATGCTTATTTTCGTCACTGTCCTTTCTATG Direct Gain 0 0.959861331864055 0 0.176731646060944 prediction 0.919722663728109 Functional Gain - GPR160 ENSG00000173890 CDS Human protein_coding chr3:169802272 chr3:169802272 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104115 0 0 1 0 0 Cytosol 0 0.438732092100784 0 0 hPsi_site_3075 iPseU_CNN:0;iRNA_PseU:0 3076 chr21 31802662 31802662 1 + C T UCEC 31802662 + 31802642 31802682 41 GGCTACCTGTACTACCCAGGCTCCTACCCCAGCAGCCTGGT GGCTACCTGTACTACCCAGGTTCCTACCCCAGCAGCCTGGT Direct Gain 0 0.959850957985111 0 0.999719500541687 prediction 0.919701915970223 Functional Gain - KRTAP13-4 ENSG00000186971 CDS Human protein_coding chr21:31802662 chr21:31802662 synonymous SNV . 0 21 hPsi_associated_SNPs_104116 0 0 0 0 0 unknown 0 0.438718624831234 0.999439001083374 0 hPsi_site_3076 iPseU_CNN:0.999439001083374;iRNA_PseU:0 3077 chr16 29107506 29107506 1 + A T KICH 29107506 + 29107486 29107526 41 AAAAATTGCAGGATCCAAGTAATCCTGCCATCATCAGGCAG AAAAATTGCAGGATCCAAGTTATCCTGCCATCATCAGGCAG Direct Gain 0 0.959843303628195 0 0.939383685588837 prediction 0.91968660725639 Functional Gain - RRN3P2 ENSG00000103472 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:29107506 chr16:29107506 . . 0 21 hPsi_associated_SNPs_104117 0 0 0 0 1 unknown 0 0.438718592293462 0.878767371177674 0 hPsi_site_3077 iPseU_CNN:0.878767371177674;iRNA_PseU:0 3078 chr1 240256710 240256710 1 + C T GBM 240256710 + 240256690 240256730 41 CTCGCCCAATCACTCCCCGTCTCAGTCCCCTAATCAGAGCC CTCGCCCAATCACTCCCCGTTTCAGTCCCCTAATCAGAGCC Direct Gain 0 0.959837349013426 0 0.99087780714035 prediction 0.919674698026852 Functional Gain - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240256710 chr1:240256710 nonsynonymous SNV 0.981 2 21 hPsi_associated_SNPs_104118 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592995102 0.9817556142807 0 hPsi_site_3078 iPseU_CNN:0.9817556142807;iRNA_PseU:0 3079 chr7 146536812 146536812 1 + G T LUSC 146536812 + 146536792 146536832 41 CCCATCTTCAGGTGCTGGGGGATGGTCTCCATCAGACAGCG CCCATCTTCAGGTGCTGGGGTATGGTCTCCATCAGACAGCG Direct Gain 0 0.959819811586611 0 0.999959826469421 prediction 0.919639623173222 Functional Gain - CNTNAP2 ENSG00000174469 CDS Human protein_coding chr7:146536812 chr7:146536812 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104119 0 0 0 0 1 Ribosome 0 0.438717445798616 0.999919652938842 0 hPsi_site_3079 iPseU_CNN:0.999919652938842;iRNA_PseU:0 3080 chr2 20648307 20648307 1 + T A rs558555999 20648307 - 20648287 20648327 41 AAAATTATATCTATATTTATATAACATCCCCCCATCCTCCC AAAATTATATCTATATTTATTTAACATCCCCCCATCCTCCC Direct Gain 0 0.95981859228512 0 0.903606712818146 prediction 0.91963718457024 Functional Gain - RHOB ENSG00000143878 UTR3 Human protein_coding chr2:20648307 chr2:20648307 . . 0 21 hPsi_associated_SNPs_104120 0 0 0 0 0 Cytosol 0 0.438718592995102 0.807213425636292 0 hPsi_site_3080 iPseU_CNN:0.807213425636292;iRNA_PseU:0 3081 chr20 34457471 34457471 1 + C T SKCM 34457471 + 34457451 34457491 41 TCCTCGGCTTGACAAAAATTCATGTGAGTCTACAGTTTGTT TCCTCGGCTTGACAAAAATTTATGTGAGTCTACAGTTTGTT Direct Gain 0 0.959817765825321 0 0.99998414516449 prediction 0.919635531650642 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34457471 chr20:34457471 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_104121 0 0 1 0 0 Nucleus 0 0.438715045706832 0.99996829032898 0 hPsi_site_3081 iPseU_CNN:0.99996829032898;iRNA_PseU:0 3082 chr3 9483337 9483337 1 + G T UCEC 9483337 + 9483317 9483357 41 AGATCCTGAGGGCTGCAAGAGATTTGGCTTTGGACACTCTT AGATCCTGAGGGCTGCAAGATATTTGGCTTTGGACACTCTT Direct Gain 0 0.959806872785713 0 0.944336533546448 prediction 0.919613745571426 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9483337 chr3:9483337 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104122 0 0 1 0 2 Nucleus 0 0.438881895905092 0.888673067092896 0 hPsi_site_3082 iPseU_CNN:0.888673067092896;iRNA_PseU:0 3083 chr1 152659534 152659534 1 + G A rs61730789 152659534 - 152659514 152659554 41 GGGGCCTGTGGTGGCTCAGGCAGCAGCCACCAGCCCCAGAG GGGGCCTGTGGTGGCTCAGGTAGCAGCCACCAGCCCCAGAG Direct Gain 0 0.959802824928116 0 0.882066071033478 prediction 0.919605649856232 Functional Gain - LCE2B ENSG00000159455 CDS Human protein_coding chr1:152659534 chr1:152659534 nonsynonymous SNV 0.429 1 21 hPsi_associated_SNPs_104123 0 0 0 0 0 unknown 0 0.438718593652053 0.764132142066956 0 hPsi_site_3083 iPseU_CNN:0.764132142066956;iRNA_PseU:0 3084 chr20 8609036 8609036 1 + C A LUSC 8609036 - 8609016 8609056 41 GCCACGAGATTCAAATGGGAGATGTTCACGAGGTCAGGCCC GCCACGAGATTCAAATGGGATATGTTCACGAGGTCAGGCCC Direct Gain 0 0.959798294720565 0 0.999714016914368 prediction 0.919596589441131 Functional Gain - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8609036 chr20:8609036 synonymous SNV . 0 21 hPsi_associated_SNPs_104124 0 0 0 0 0 Nucleus 0 0.438148523211543 0.999428033828736 0 hPsi_site_3084 iPseU_CNN:0.999428033828736;iRNA_PseU:0 3085 chr7 106508164 106508164 1 + G A COAD 106508164 - 106508144 106508184 41 GCAGCAGCGCCGTTTCGGGGCTCTTGCATTTGCGCTGGCTG GCAGCAGCGCCGTTTCGGGGTTCTTGCATTTGCGCTGGCTG Direct Gain 0 0.959797839812995 0 2.89082527160645e-05 prediction 0.91959567962599 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508164 chr7:106508164 nonsynonymous SNV 0.372 0 21 hPsi_associated_SNPs_104125 0 0 0 0 0 Cytosol 0 0.438718765592153 0 0 hPsi_site_3085 iPseU_CNN:0;iRNA_PseU:0 3086 chr11 58378451 58378451 1 + G A HNSC 58378451 - 58378431 58378471 41 CTCTTCACTGATTAACATCTCTTCTTCCTCCTCCTCTTCCT CTCTTCACTGATTAACATCTTTTCTTCCTCCTCCTCTTCCT Direct Gain 0 0.959786131278355 0 0.863733649253845 prediction 0.919572262556709 Functional Gain - ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58378451 chr11:58378451 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104126 0 0 0 0 0 chromatin 0 0.438516452103589 0.72746729850769 0 hPsi_site_3086 iPseU_CNN:0.72746729850769;iRNA_PseU:0 3087 chr2 90121878 90121878 1 + C T HNSC 90121878 + 90121858 90121898 41 ATGACCCAGTCTCCATCTGCCATGTCTGCATCTGTAGGAGA ATGACCCAGTCTCCATCTGCTATGTCTGCATCTGTAGGAGA Direct Gain 0 0.959784109364365 0 0.96600604057312 prediction 0.91956821872873 Functional Gain - MIR4436A;LOC654342 ENSG00000242766 CDS Human IG_V_gene chr2:90121878 chr2:90121878 synonymous SNV . 0 21 hPsi_associated_SNPs_104127 0 0 0 0 0 unknown 0 0.437493165487855 0.93201208114624 0 hPsi_site_3087 iPseU_CNN:0.93201208114624;iRNA_PseU:0 3088 chr6 160505029 160505029 1 + G A LUAD 160505029 - 160505009 160505049 41 TTGTGGCCTCCCAATGTCCTCATCTTCATCACACTTAAATA TTGTGGCCTCCCAATGTCCTTATCTTCATCACACTTAAATA Direct Gain 0 0.959781034635044 0 0.998910307884216 prediction 0.919562069270088 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160505029 chr6:160505029 nonsynonymous SNV 0.724 0 21 hPsi_associated_SNPs_104128 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593490066 0.997820615768432 0 hPsi_site_3088 iPseU_CNN:0.997820615768432;iRNA_PseU:0 3089 chr19 45321813 45321813 1 + G A UCEC 45321813 - 45321793 45321833 41 CTGTTTAGAGGTAAGGAAAGCACCTTCCCCTCGCTGAGCTC CTGTTTAGAGGTAAGGAAAGTACCTTCCCCTCGCTGAGCTC Direct Gain 0 0.959774945940434 0 0.994498372077942 prediction 0.919549891880868 Functional Gain - BCAM ENSG00000187244 CDS Human protein_coding chr19:45321813 chr19:45321813 synonymous SNV . 0 21 hPsi_associated_SNPs_104129 0 0 0 0 0 cytosol 0 0.438718722299001 0.988996744155884 0 hPsi_site_3089 iPseU_CNN:0.988996744155884;iRNA_PseU:0 3090 chr1 145304502 145304502 1 + G A UCEC 145304502 - 145304482 145304522 41 GCTATTTGAATAAGTGATGGCACATTCCTCCAGTGAGTCCT GCTATTTGAATAAGTGATGGTACATTCCTCCAGTGAGTCCT Direct Gain 0 0.95974655737008 0 0.150905728340149 prediction 0.919493114740161 Functional Gain - NBPF10 ENSG00000163386 CDS Human other chr1:145304502 chr1:145304502 nonsynonymous SNV 0.017 2 21 hPsi_associated_SNPs_104130 0 0 0 0 0 chromatin 0 0.438718544724362 0 0 hPsi_site_3090 iPseU_CNN:0;iRNA_PseU:0 3091 chr8 75761430 75761430 1 + G A ESCA 75761430 - 75761410 75761450 41 GAAAACACAGATTGTCAGTACAAGATCCCCCATAACTTGGA GAAAACACAGATTGTCAGTATAAGATCCCCCATAACTTGGA Direct Gain 0 0.959744171263885 0 0.983732759952545 prediction 0.919488342527771 Functional Gain - PI15 ENSG00000137558 CDS Human protein_coding chr8:75761430 chr8:75761430 nonsynonymous SNV 0.874 4 21 hPsi_associated_SNPs_104131 0 0 0 0 0 exosome 0 0.438718619625647 0.96746551990509 0 hPsi_site_3091 iPseU_CNN:0.96746551990509;iRNA_PseU:0 3092 chr2 149226804 149226804 1 + C T STAD 149226804 + 149226784 149226824 41 AAGAGTTCAGCATTCAGCTTCAACCTCCCTGTCCCCTTCTC AAGAGTTCAGCATTCAGCTTTAACCTCCCTGTCCCCTTCTC Direct Gain 0 0.959743564695842 0 0.138245552778244 prediction 0.919487129391684 Functional Gain - MBD5 ENSG00000204406 CDS Human protein_coding chr2:149226804 chr2:149226804 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104132 0 0 0 0 0 chromatin 0 0.438493122506277 0 0 hPsi_site_3092 iPseU_CNN:0;iRNA_PseU:0 3093 chr16 70161220 70161220 1 + G A BLCA 70161220 - 70161200 70161240 41 GCCATCTTCTGCTCAATGGTCAAGTGCCTGGCAGTGCTCAG GCCATCTTCTGCTCAATGGTTAAGTGCCTGGCAGTGCTCAG Direct Gain 0 0.959740023390336 0 0.999891996383667 prediction 0.919480046780672 Functional Gain - PDPR ENSG00000090857 CDS Human protein_coding chr16:70161220 chr16:70161220 synonymous SNV . 0 21 hPsi_associated_SNPs_104133 0 0 0 0 0 Nucleus 0 0.437042920656508 0.999783992767334 0 hPsi_site_3093 iPseU_CNN:0.999783992767334;iRNA_PseU:0 3094 chr16 56995987 56995987 1 + C A BLCA 56995987 - 56995967 56996007 41 ACCAGGAGGGCAGGCTTGGTGATGCGGCACACGATGCCTGC ACCAGGAGGGCAGGCTTGGTTATGCGGCACACGATGCCTGC Direct Gain 0 0.959737908145011 0 0.99956750869751 prediction 0.919475816290022 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:56995987 chr16:56995987 synonymous SNV . 0 21 hPsi_associated_SNPs_104134 0 0 0 0 0 exosome 0 0.438685339374839 0.99913501739502 0 hPsi_site_3094 iPseU_CNN:0.99913501739502;iRNA_PseU:0 3095 chr6 56857192 56857192 1 + G T UCEC 56857192 + 56857172 56857212 41 TTAGAGAGACCCATATTCGGGAAATGCCTTTCTGCCTGGTG TTAGAGAGACCCATATTCGGTAAATGCCTTTCTGCCTGGTG Direct Gain 0 0.959737594833719 0 0.999371886253357 prediction 0.919475189667439 Functional Gain - BEND6 ENSG00000151917 CDS Human protein_coding chr6:56857192 chr6:56857192 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_104135 0 0 0 0 1 chromatin 0 0.438718592995042 0.998743772506714 0 hPsi_site_3095 iPseU_CNN:0.998743772506714;iRNA_PseU:0 3096 chr17 21081629 21081629 1 + G T UCEC 21081629 + 21081609 21081649 41 CCCTAGAAGAGCTCATCAGAGAACTCACCGCTTCTCATGCC CCCTAGAAGAGCTCATCAGATAACTCACCGCTTCTCATGCC Direct Gain 0 0.95973642525441 0 0.699653267860413 prediction 0.919472850508821 Functional Gain - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21081629 chr17:21081629 stopgain 0.091 1 21 hPsi_associated_SNPs_104136 0 0 1 0 2 Endoplasmic reticulum 0 0.438718948725969 0.399306535720826 0 hPsi_site_3096 iPseU_CNN:0.399306535720826;iRNA_PseU:0 3097 chr19 20308019 20308019 1 + C T BLCA 20308019 + 20307999 20308039 41 GAAAGTCTTTCATCAATTTTCAAATTCAAAGAGACATAAAA GAAAGTCTTTCATCAATTTTTAAATTCAAAGAGACATAAAA Direct Gain 0 0.959730784085877 0 0.999998807907104 prediction 0.919461568171755 Functional Gain - ZNF486 ENSG00000256229 CDS Human protein_coding chr19:20308019 chr19:20308019 nonsynonymous SNV 0.047 0 21 hPsi_associated_SNPs_104137 0 0 0 0 0 exosome 0 0.438721317268607 0.999997615814208 0 hPsi_site_3097 iPseU_CNN:0.999997615814208;iRNA_PseU:0 3098 chr7 20451501 20451501 1 + G A rs577265227 20451501 - 20451481 20451521 41 CCATTGGGGAAGACAGGGCTCATGGCCCGTGTATCAAGGTC CCATTGGGGAAGACAGGGCTTATGGCCCGTGTATCAAGGTC Direct Gain 0 0.95972952712665 0 0.991025924682617 prediction 0.9194590542533 Functional Gain - ITGB8 ENSG00000105855 UTR3 Human protein_coding chr7:20451501 chr7:20451501 . . 0 21 hPsi_associated_SNPs_104138 0 0 0 0 0 Nucleus 0 0.438718592743527 0.982051849365234 0 hPsi_site_3098 iPseU_CNN:0.982051849365234;iRNA_PseU:0 3099 chr20 55910931 55910931 1 + T A LUAD 55910931 - 55910911 55910951 41 GCAAGGAGACAATTTGTTGCAAAAGTTGTCATCTAGGAGCC GCAAGGAGACAATTTGTTGCTAAAGTTGTCATCTAGGAGCC Direct Gain 0 0.95972656769383 0 0.767608046531677 prediction 0.919453135387659 Functional Gain - SPO11 ENSG00000054796 CDS Human protein_coding chr20:55910931 chr20:55910931 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_104139 0 0 0 0 0 unknown 0 0.438718592930759 0.535216093063354 0 hPsi_site_3099 iPseU_CNN:0.535216093063354;iRNA_PseU:0 3100 chr19 19656345 19656345 1 + G T LUSC 19656345 + 19656325 19656365 41 GTGGAGTTCAAGTGCAGCGGGATGCTGTTCGACCAGCGGCA GTGGAGTTCAAGTGCAGCGGTATGCTGTTCGACCAGCGGCA Direct Gain 0 0.959712288643256 0 0.999906897544861 prediction 0.919424577286513 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19656345 chr19:19656345 synonymous SNV . 0 21 hPsi_associated_SNPs_104140 0 0 1 0 0 exosome 0 0.438718601198694 0.999813795089722 0 hPsi_site_3100 iPseU_CNN:0.999813795089722;iRNA_PseU:0 3101 chr1 86900306 86900306 1 + G T UCEC 86900306 + 86900286 86900326 41 ATGTAATCACAGACTCTGCTGACTTTCACCACAGCTTTCCC ATGTAATCACAGACTCTGCTTACTTTCACCACAGCTTTCCC Direct Gain 0 0.959711520108627 0 0.999767184257507 prediction 0.919423040217253 Functional Gain - CLCA2 ENSG00000137975 CDS Human protein_coding chr1:86900306 chr1:86900306 nonsynonymous SNV 0.032 4 21 hPsi_associated_SNPs_104141 0 0 0 0 0 exosome 0 0.438698376348464 0.999534368515014 0 hPsi_site_3101 iPseU_CNN:0.999534368515014;iRNA_PseU:0 3102 chr5 128844895 128844895 1 + G T UCEC 128844895 + 128844875 128844915 41 ATGGAGGAAAAGGTCACAGAGAAGTCAGCTCTTCACAGTCA ATGGAGGAAAAGGTCACAGATAAGTCAGCTCTTCACAGTCA Direct Gain 0 0.959704157825061 0 0.304099768400192 prediction 0.919408315650122 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:128844895 chr5:128844895 nonsynonymous SNV 0.985 0 21 hPsi_associated_SNPs_104142 0 0 0 0 1 exosome 0 0.452938795971762 0 0 hPsi_site_3102 iPseU_CNN:0;iRNA_PseU:0 3103 chr4 57889570 57889570 1 + G A ESCA 57889570 - 57889550 57889590 41 TGTTTTGCCTATAATAACATCATCTCCTGATACACGAACCC TGTTTTGCCTATAATAACATTATCTCCTGATACACGAACCC Direct Gain 0 0.959700274472568 0 0.526595234870911 prediction 0.919400548945135 Functional Gain - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57889570 chr4:57889570 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_104143 0 0 0 0 0 Nucleus 0 0.438718591766911 0.053190469741822 0 hPsi_site_3103 iPseU_CNN:0.053190469741822;iRNA_PseU:0 3104 chr4 156618262 156618262 1 + G T BLCA 156618262 + 156618242 156618282 41 GCAGAGAGTATTTGCAAACTGATTTTCCCAGAGGTGAGTGC GCAGAGAGTATTTGCAAACTTATTTTCCCAGAGGTGAGTGC Direct Gain 0 0.959696001381705 0 0.492962181568146 prediction 0.91939200276341 Functional Gain - GUCY1A3 ENSG00000164116 CDS Human protein_coding chr4:156618262 chr4:156618262 synonymous SNV . 0 21 hPsi_associated_SNPs_104144 0 0 0 0 1 exosome 0 0.43871763867961 0 0 hPsi_site_3104 iPseU_CNN:0;iRNA_PseU:0 3105 chr9 19360258 19360258 1 + G A THCA 19360258 - 19360238 19360278 41 AAACAGGGGGAGGATTGGGTCTTTTTCCTAAAGGATCCTTA AAACAGGGGGAGGATTGGGTTTTTTTCCTAAAGGATCCTTA Direct Gain 0 0.959694178620584 0 0.989375948905945 prediction 0.919388357241169 Functional Gain - DENND4C ENSG00000137145 CDS Human protein_coding chr9:19360258 chr9:19360258 nonsynonymous SNV 0.979 1 21 hPsi_associated_SNPs_104145 0 0 0 0 0 Nucleus 0 0.438718591009683 0.97875189781189 0 hPsi_site_3105 iPseU_CNN:0.97875189781189;iRNA_PseU:0 3106 chr10 121203219 121203219 1 + G A OV 121203219 - 121203199 121203239 41 TCGGAGAACTTGTGGGAGTACACCTCCTCCGTCTCCAGGAC TCGGAGAACTTGTGGGAGTATACCTCCTCCGTCTCCAGGAC Direct Gain 0 0.959692791434247 0 0.983249664306641 prediction 0.919385582868493 Functional Gain - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121203219 chr10:121203219 synonymous SNV . 0 21 hPsi_associated_SNPs_104146 0 0 0 0 0 Cytosol 0 0.438718592995081 0.966499328613282 0 hPsi_site_3106 iPseU_CNN:0.966499328613282;iRNA_PseU:0 3107 chr3 147128137 147128137 1 + C A DLBC 147128137 - 147128117 147128157 41 GACGTGGCCCGGGTGATGGTGATGGCCCAGGGCCGCAGCAG GACGTGGCCCGGGTGATGGTTATGGCCCAGGGCCGCAGCAG Direct Gain 0 0.959680639198367 0 0.98962676525116 prediction 0.919361278396734 Functional Gain - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147128137 chr3:147128137 nonsynonymous SNV 0.991 5 21 hPsi_associated_SNPs_104147 0 0 0 0 0 exosome 0 0.438866500780082 0.97925353050232 0 hPsi_site_3107 iPseU_CNN:0.97925353050232;iRNA_PseU:0 3108 chr19 19467330 19467330 1 + G A rs560120555 19467330 - 19467310 19467350 41 GTGGCTGGTGCAACAGGAGCCTCAGCTCCCAGCTCCATCTC GTGGCTGGTGCAACAGGAGCTTCAGCTCCCAGCTCCATCTC Direct Gain 0 0.95968026731064 0 0.997895896434784 prediction 0.91936053462128 Functional Gain - MAU2 ENSG00000129933 UTR3 Human protein_coding chr19:19467330 chr19:19467330 . . 0 21 hPsi_associated_SNPs_104148 0 0 0 0 0 Nucleus 0 0.438702339012212 0.995791792869568 0 hPsi_site_3108 iPseU_CNN:0.995791792869568;iRNA_PseU:0 3109 chr6 151626957 151626957 1 + G T LUSC 151626957 + 151626937 151626977 41 AGCTCAGCCTCCAGGAGGGTGACCTAAATGGCCAGAAAGGA AGCTCAGCCTCCAGGAGGGTTACCTAAATGGCCAGAAAGGA Direct Gain 0 0.959674639936691 0 0.907785296440125 prediction 0.919349279873381 Functional Gain - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151626957 chr6:151626957 nonsynonymous SNV 0.085 0 21 hPsi_associated_SNPs_104149 0 0 1 0 1 Ribosome 0 0.438718587406101 0.81557059288025 0 hPsi_site_3109 iPseU_CNN:0.81557059288025;iRNA_PseU:0 3110 chr4 2927785 2927785 1 + G T UCEC 2927785 + 2927765 2927805 41 AGAAAGAAAAGAGTCCTCCAGACCAGCCTGCGGTCCCCCAC AGAAAGAAAAGAGTCCTCCATACCAGCCTGCGGTCCCCCAC Direct Gain 0 0.959674389583516 0 0.817379832267761 prediction 0.919348779167032 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2927785 chr4:2927785 nonsynonymous SNV 0.833 2 21 hPsi_associated_SNPs_104150 0 0 1 0 2 Ribosome 0 0.438718592995102 0.634759664535522 0 hPsi_site_3110 iPseU_CNN:0.634759664535522;iRNA_PseU:0 3111 chr4 83372273 83372273 1 + G T UCEC 83372273 + 83372253 83372293 41 GGAGTGGATGATCTGCAACAGATGATCCAGGCCGTGGTAGA GGAGTGGATGATCTGCAACATATGATCCAGGCCGTGGTAGA Direct Gain 0 0.959669216147664 0 0.97213888168335 prediction 0.919338432295328 Functional Gain - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83372273 chr4:83372273 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_104151 0 0 1 0 1 Ribosome 0 0.438723321890059 0.9442777633667 0 hPsi_site_3111 iPseU_CNN:0.9442777633667;iRNA_PseU:0 3112 chr12 50867242 50867242 1 + G A STAD 50867242 - 50867222 50867262 41 GCAGAAGTGCATTCTGTCTGCTCATCTGCAGGCACTGGGCA GCAGAAGTGCATTCTGTCTGTTCATCTGCAGGCACTGGGCA Direct Gain 0 0.95965107130312 0 0.997229695320129 prediction 0.91930214260624 Functional Gain - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50867242 chr12:50867242 synonymous SNV . 0 21 hPsi_associated_SNPs_104152 0 0 0 0 0 Nucleus 0 0.438673802837999 0.994459390640258 0 hPsi_site_3112 iPseU_CNN:0.994459390640258;iRNA_PseU:0 3113 chr19 1272041 1272041 1 + G A BRCA 1272041 - 1272021 1272061 41 GTGTGACTTACCGTAACTGTCATAACTGTCTCTGTAGGACC GTGTGACTTACCGTAACTGTTATAACTGTCTCTGTAGGACC Direct Gain 0 0.959643040795297 0 0.998084306716919 prediction 0.919286081590593 Functional Gain - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272041 chr19:1272041 nonsynonymous SNV 0.594 2 21 hPsi_associated_SNPs_104153 0 0 0 0 0 Ribosome 0 0.438772833002609 0.996168613433838 0 hPsi_site_3113 iPseU_CNN:0.996168613433838;iRNA_PseU:0 3114 chr10 101591500 101591500 1 + G T SARC 101591500 + 101591480 101591520 41 GGCTCAGTGCTTGGACCAGTGACTCTAAAATCTTCAATAGC GGCTCAGTGCTTGGACCAGTTACTCTAAAATCTTCAATAGC Direct Gain 0 0.959640028152256 0 0.998997211456299 prediction 0.919280056304512 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101591500 chr10:101591500 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_104154 0 0 1 0 1 Endoplasmic reticulum 0 0.438772300444022 0.997994422912598 0 hPsi_site_3114 iPseU_CNN:0.997994422912598;iRNA_PseU:0 3115 chr9 132084622 132084622 1 + G T THCA 132084622 + 132084602 132084642 41 CAGAGCACTGATGCCCGGGGGACACTGCCCTTTGTGTGTCC CAGAGCACTGATGCCCGGGGTACACTGCCCTTTGTGTGTCC Direct Gain 0 0.959634262795705 0 0.998493194580078 prediction 0.91926852559141 Functional Gain - C9orf106 ENSG00000179082 ncRNA_exonic Human lincRNA chr9:132084622 chr9:132084622 . . 0 21 hPsi_associated_SNPs_104155 0 0 0 0 0 Exosome 0 0.438949367365266 0.996986389160156 0 hPsi_site_3115 iPseU_CNN:0.996986389160156;iRNA_PseU:0 3116 chr9 140002630 140002630 1 + G A rs577598300 140002630 - 140002610 140002650 41 CAACCCTCAAGTGACCACGACAGAAACCGCCTCCCCCAGAA CAACCCTCAAGTGACCACGATAGAAACCGCCTCCCCCAGAA Direct Gain 0 0.959633377249581 0 0.922528982162476 prediction 0.919266754499162 Functional Gain - MAN1B1 ENSG00000177239 intronic Human protein_coding chr9:140002630 chr9:140002630 . . 0 21 hPsi_associated_SNPs_104156 0 0 0 0 0 Ribosome 0 0.438718546120821 0.845057964324952 0 hPsi_site_3116 iPseU_CNN:0.845057964324952;iRNA_PseU:0 3117 chr2 90458658 90458658 1 + G T LUAD 90458658 + 90458638 90458678 41 CTTATTACTGTCAACAGAGTGACAGTACCCCTCCCACAGCG CTTATTACTGTCAACAGAGTTACAGTACCCCTCCCACAGCG Direct Gain 0 0.959628924518915 0 0.986302495002747 prediction 0.919257849037831 Functional Gain - MIR4436A;LOC654342 ENSG00000270999 CDS Human IG_V_pseudogene chr2:90458658 chr2:90458658 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_104157 0 0 0 0 1 unknown 0 0.438718460960523 0.972604990005494 0 hPsi_site_3117 iPseU_CNN:0.972604990005494;iRNA_PseU:0 3118 chr9 33886963 33886963 1 + G A LUSC 33886963 - 33886943 33886983 41 TGATGGATGTCTCCTTACCTCATAAATGTTGGGGTGCCACA TGATGGATGTCTCCTTACCTTATAAATGTTGGGGTGCCACA Direct Gain 0 0.959627618599125 0 0.965757012367249 prediction 0.919255237198249 Functional Gain - UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33886963 chr9:33886963 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104158 0 0 0 0 0 Cytosol 0 0.438662883410072 0.931514024734498 0 hPsi_site_3118 iPseU_CNN:0.931514024734498;iRNA_PseU:0 3119 chr7 2625881 2625881 1 + G A LIHC 2625881 - 2625861 2625901 41 AGGAGGGCACTGCCCATCTTCTTCTGCCTTTTGGCGCCCGT AGGAGGGCACTGCCCATCTTTTTCTGCCTTTTGGCGCCCGT Direct Gain 0 0.959622250950696 0 0.966615259647369 prediction 0.919244501901392 Functional Gain - IQCE ENSG00000106012 CDS Human protein_coding chr7:2625881 chr7:2625881 synonymous SNV . 0 21 hPsi_associated_SNPs_104159 0 0 0 0 0 chromatin 0 0.438718587465868 0.933230519294738 0 hPsi_site_3119 iPseU_CNN:0.933230519294738;iRNA_PseU:0 3120 chr7 149575859 149575859 1 + G A BRCA 149575859 - 149575839 149575879 41 CTGGGTCGGGGGCGGCGGGTCACTCCCACAGGAAGCGCACG CTGGGTCGGGGGCGGCGGGTTACTCCCACAGGAAGCGCACG Direct Gain 0 0.959621946420955 0 0.999572932720184 prediction 0.91924389284191 Functional Gain - ATP6V0E2 ENSG00000171130 CDS Human protein_coding chr7:149575859 chr7:149575859 synonymous SNV . 0 21 hPsi_associated_SNPs_104160 0 0 0 0 0 Ribosome 0 0.434975129917358 0.999145865440368 0 hPsi_site_3120 iPseU_CNN:0.999145865440368;iRNA_PseU:0 3121 chr16 12662912 12662912 1 + G A rs116984143 12662912 - 12662892 12662932 41 CAAAAGGAGAGGCTAATAGTCATTCTAGTCCCCACGTGGGA CAAAAGGAGAGGCTAATAGTTATTCTAGTCCCCACGTGGGA Direct Gain 0 0.959615797627344 0 0.978495836257935 prediction 0.919231595254689 Functional Gain - SNX29 ENSG00000259899 ncRNA_intronic Human antisense chr16:12662912 chr16:12662912 . . 0 21 hPsi_associated_SNPs_104161 0 0 0 0 0 Nucleus 0 0.438718885584771 0.95699167251587 0 hPsi_site_3121 iPseU_CNN:0.95699167251587;iRNA_PseU:0 3122 chr15 25330543 25330543 1 + G A ESCA 25330543 - 25330523 25330563 41 AGGAATGTATATAAGGAAGTCATCATCGATCCAGGCACAGT AGGAATGTATATAAGGAAGTTATCATCGATCCAGGCACAGT Direct Gain 0 0.959614905426807 0 0.928255319595337 prediction 0.919229810853613 Functional Gain - SNORD116-18 ENSG00000206688 ncRNA_exonic Human snoRNA chr15:25330543 chr15:25330543 . . 0 21 hPsi_associated_SNPs_104162 0 0 0 0 0 unknown 0 0.438828308642449 0.856510639190674 0 hPsi_site_3122 iPseU_CNN:0.856510639190674;iRNA_PseU:0 3123 chr12 117448229 117448229 1 + C T UCEC 117448229 + 117448209 117448249 41 AGCGACAGCCCTCCCAACCTCATGGTCAGTGGCAACATGGA AGCGACAGCCCTCCCAACCTTATGGTCAGTGGCAACATGGA Direct Gain 0 0.959597347590804 0 0.425888299942017 prediction 0.919194695181607 Functional Gain - FBXW8 ENSG00000174989 CDS Human protein_coding chr12:117448229 chr12:117448229 synonymous SNV . 0 21 hPsi_associated_SNPs_104163 0 0 0 1 1 Cytosol 0 0.436509391642129 0 0 hPsi_site_3123 iPseU_CNN:0;iRNA_PseU:0 3124 chr3 186395238 186395238 1 + C T SKCM 186395238 + 186395218 186395258 41 ATACCCATAGACAGCATCCCCATGGACACCACCCCCATGGA ATACCCATAGACAGCATCCCTATGGACACCACCCCCATGGA Direct Gain 0 0.959589213494423 0 0.876985430717468 prediction 0.919178426988847 Functional Gain - HRG ENSG00000113905 CDS Human protein_coding chr3:186395238 chr3:186395238 nonsynonymous SNV 0.028 1 21 hPsi_associated_SNPs_104164 0 0 0 0 0 exosome 0 0.438380636470302 0.753970861434936 0 hPsi_site_3124 iPseU_CNN:0.753970861434936;iRNA_PseU:0 3125 chr17 40998188 40998188 1 + G A STAD 40998188 - 40998168 40998208 41 AAGTGGAAGGCATGTGTGTGCACCGTTCCCAGCACTCTTTC AAGTGGAAGGCATGTGTGTGTACCGTTCCCAGCACTCTTTC Direct Gain 0 0.959589065391051 0 0.998983860015869 prediction 0.919178130782103 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40998188 chr17:40998188 synonymous SNV . 0 21 hPsi_associated_SNPs_104165 0 0 0 0 0 exosome 0 0.438712897225589 0.997967720031738 0 hPsi_site_3125 iPseU_CNN:0.997967720031738;iRNA_PseU:0 3126 chrX 134481065 134481065 1 + G A SARC 134481065 - 134481045 134481085 41 ATTCAAGGATGCCTGGATTGCACAACCCAGGGCCACAGCCA ATTCAAGGATGCCTGGATTGTACAACCCAGGGCCACAGCCA Direct Gain 0 0.959587974509823 0 0.967094898223877 prediction 0.919175949019646 Functional Gain - ZNF449 ENSG00000173275 CDS Human protein_coding chrX:134481065 chrX:134481065 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104166 0 0 0 0 0 cytosol 0 0.438409919750852 0.934189796447754 0 hPsi_site_3126 iPseU_CNN:0.934189796447754;iRNA_PseU:0 3127 chr2 169766363 169766363 1 + C A rs10176348 169766363 - 169766343 169766383 41 ACTTTGATTTTTTGAGGTTTGTTATCCTCAGCTACTATCAT ACTTTGATTTTTTGAGGTTTTTTATCCTCAGCTACTATCAT Direct Gain 0 0.959586587817369 0 0.167730271816254 prediction 0.919173175634739 Functional Gain - G6PC2 ENSG00000152254 UTR3 Human protein_coding chr2:169766363 chr2:169766363 . . 0 21 hPsi_associated_SNPs_104167 0 0 0 0 0 Nucleus 0 0.438756197844201 0 0 hPsi_site_3127 iPseU_CNN:0;iRNA_PseU:0 3128 chr22 41921257 41921257 1 + G A BRCA 41921257 - 41921237 41921277 41 GCTGGTGGGGCTCACGTCCACATGCTGCCCGCTGCTGTCCT GCTGGTGGGGCTCACGTCCATATGCTGCCCGCTGCTGTCCT Direct Gain 0 0.959582718508764 0 0.0252324938774109 prediction 0.919165437017528 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41921257 chr22:41921257 nonsynonymous SNV 0.008 4 21 hPsi_associated_SNPs_104168 0 0 1 0 0 chromatin 0 0.438715953849153 0 0 hPsi_site_3128 iPseU_CNN:0;iRNA_PseU:0 3129 chr16 22545899 22545899 1 + C T DLBC 22545899 + 22545879 22545919 41 AGCAGATGATAATATCAAGACACCTGCCGAGCGTCTGCGGG AGCAGATGATAATATCAAGATACCTGCCGAGCGTCTGCGGG Direct Gain 0 0.959576754255978 0 0.999984860420227 prediction 0.919153508511956 Functional Gain - NPIPB5 ENSG00000243716 CDS Human protein_coding chr16:22545899 chr16:22545899 nonsynonymous SNV 0.004 2 21 hPsi_associated_SNPs_104169 0 0 0 0 0 chromatin 0 0.438718625197695 0.999969720840454 0 hPsi_site_3129 iPseU_CNN:0.999969720840454;iRNA_PseU:0 3130 chrX 37027536 37027536 1 + G A SKCM 37027536 - 37027516 37027556 41 GGTTCCGGGCAGAGATGGGACACTCCAGTCTCGGGAGGCTC GGTTCCGGGCAGAGATGGGATACTCCAGTCTCGGGAGGCTC Direct Gain 0 0.959568266820276 0 0.997597336769104 prediction 0.919136533640552 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37027536 chrX:37027536 synonymous SNV . 0 21 hPsi_associated_SNPs_104170 0 0 0 0 0 unknown 0 0.438718935979992 0.995194673538208 0 hPsi_site_3130 iPseU_CNN:0.995194673538208;iRNA_PseU:0 3131 chr1 110693407 110693407 1 + G A rs527382871 110693407 - 110693387 110693427 41 GCACAGCTCCTCCCCCGGGCCACAGGCCCCCGGCTGGGGCT GCACAGCTCCTCCCCCGGGCTACAGGCCCCCGGCTGGGGCT Direct Gain 0 0.959565260977187 0 0.260569095611572 prediction 0.919130521954374 Functional Gain - SLC6A17 ENSG00000197106 UTR5 Human protein_coding chr1:110693407 chr1:110693407 . . 0 21 hPsi_associated_SNPs_104171 0 0 0 0 0 exosome 0 0.438718592822954 0 0 hPsi_site_3131 iPseU_CNN:0;iRNA_PseU:0 3132 chr1 186901931 186901931 1 + T A COAD 186901931 - 186901911 186901951 41 GAATCCCACCATGGCTCGGAAACCCCCACCTGAACCCAATA GAATCCCACCATGGCTCGGATACCCCCACCTGAACCCAATA Direct Gain 0 0.959553684838471 0 0.999301671981812 prediction 0.919107369676941 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186901931 chr1:186901931 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_104172 0 0 0 0 0 Nucleus 0 0.438667126659117 0.998603343963624 0 hPsi_site_3132 iPseU_CNN:0.998603343963624;iRNA_PseU:0 3133 chr15 77328187 77328187 1 + G A UCEC 77328187 - 77328167 77328207 41 CACTGCGATGGCTGTGTAGACACCCTCATTCCGCTCGGGGG CACTGCGATGGCTGTGTAGATACCCTCATTCCGCTCGGGGG Direct Gain 0 0.959547823756274 0 0.999978184700012 prediction 0.919095647512548 Functional Gain - PSTPIP1 ENSG00000140368 CDS Human protein_coding chr15:77328187 chr15:77328187 nonsynonymous SNV 0.088 3 21 hPsi_associated_SNPs_104173 0 0 0 0 0 exosome 0 0.438718589630607 0.999956369400024 0 hPsi_site_3133 iPseU_CNN:0.999956369400024;iRNA_PseU:0 3134 chr6 116432034 116432034 1 + G T LUAD 116432034 + 116432014 116432054 41 GCAAGCCATGGCACCAAGATGATGACTCCAGAGGTGCTGGC GCAAGCCATGGCACCAAGATTATGACTCCAGAGGTGCTGGC Direct Gain 0 0.959543885304672 0 0.998478651046753 prediction 0.919087770609343 Functional Gain - NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116432034 chr6:116432034 nonsynonymous SNV 0.872 0 21 hPsi_associated_SNPs_104174 0 0 1 0 2 Cytosol 0 0.438816040638396 0.996957302093506 0 hPsi_site_3134 iPseU_CNN:0.996957302093506;iRNA_PseU:0 3135 chr18 48584593 48584593 1 + C T LUAD 48584593 + 48584573 48584613 41 AGCAGAATGGATTTACTGGTCAGCCAGCTACTTACCATCAT AGCAGAATGGATTTACTGGTTAGCCAGCTACTTACCATCAT Direct Gain 0 0.959540544850488 0 0.200544387102127 prediction 0.919081089700977 Functional Gain - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48584593 chr18:48584593 stopgain 1.000 1 21 hPsi_associated_SNPs_104175 0 0 1 1 1 Cytosol 0 0.43869239367892 0 0 hPsi_site_3135 iPseU_CNN:0;iRNA_PseU:0 3136 chr9 74828854 74828854 1 + C A LUSC 74828854 - 74828834 74828874 41 TCCTTGTATTCTGGAAAAGTGTCATTCAAATCCATGCAAAC TCCTTGTATTCTGGAAAAGTTTCATTCAAATCCATGCAAAC Direct Gain 0 0.959531274242821 0 0.999996781349182 prediction 0.919062548485643 Functional Gain - GDA ENSG00000119125 CDS Human protein_coding chr9:74828854 chr9:74828854 nonsynonymous SNV 0.850 1 21 hPsi_associated_SNPs_104176 0 0 0 0 0 Cytosol 0 0.438718592408616 0.999993562698364 0 hPsi_site_3136 iPseU_CNN:0.999993562698364;iRNA_PseU:0 3137 chr3 47046023 47046023 1 + G T LIHC 47046023 + 47046003 47046043 41 ATATCCAACTTCGAGTACTTGATGCAACTCAACACCATTGC ATATCCAACTTCGAGTACTTTATGCAACTCAACACCATTGC Direct Gain 0 0.959512814905842 0 0.00912010669708252 prediction 0.919025629811684 Functional Gain - NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47046023 chr3:47046023 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_104177 0 0 1 0 2 Nucleus 0 0.438710275591845 0 0 hPsi_site_3137 iPseU_CNN:0;iRNA_PseU:0 3138 chrX 153668353 153668353 1 + G A SKCM 153668353 - 153668333 153668373 41 AAAGGTCTTGGGGTCATTCTCATCGAAGTTTGCCACAAACA AAAGGTCTTGGGGTCATTCTTATCGAAGTTTGCCACAAACA Direct Gain 0 0.959499471342073 0 0.944253921508789 prediction 0.918998942684146 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153668353 chrX:153668353 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104178 0 0 0 0 0 Cytosol 0 0.438688052280474 0.888507843017578 0 hPsi_site_3138 iPseU_CNN:0.888507843017578;iRNA_PseU:0 3139 chr6 44148506 44148506 1 + G A BLCA 44148506 - 44148486 44148526 41 GTTGAGCAGCCTCTGGAGCTCATACACCCCTATCTCCTTGC GTTGAGCAGCCTCTGGAGCTTATACACCCCTATCTCCTTGC Direct Gain 0 0.959499243805633 0 0.986780524253845 prediction 0.918998487611265 Functional Gain - CAPN11 ENSG00000137225 CDS Human protein_coding chr6:44148506 chr6:44148506 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_104179 0 0 0 0 0 exosome 0 0.43871898890157 0.97356104850769 0 hPsi_site_3139 iPseU_CNN:0.97356104850769;iRNA_PseU:0 3140 chr4 156135571 156135571 1 + C A UCEC 156135571 - 156135551 156135591 41 AGGAAGCTGATTCGCTTGGAGATCTTGCTCTCTAGGTGGTA AGGAAGCTGATTCGCTTGGATATCTTGCTCTCTAGGTGGTA Direct Gain 0 0.959493703979609 0 0.99982613325119 prediction 0.918987407959218 Functional Gain - NPY2R ENSG00000185149 CDS Human protein_coding chr4:156135571 chr4:156135571 synonymous SNV . 0 21 hPsi_associated_SNPs_104180 0 0 0 0 0 unknown 0 0.438660568381658 0.99965226650238 0 hPsi_site_3140 iPseU_CNN:0.99965226650238;iRNA_PseU:0 3141 chr2 202964426 202964426 1 + C T COAD 202964426 + 202964406 202964446 41 CCTCCAGGAAGGCCTTTGGGCATGGCCGCATCGATCACTCT CCTCCAGGAAGGCCTTTGGGTATGGCCGCATCGATCACTCT Direct Gain 0 0.959489242011139 0 0.999947905540466 prediction 0.918978484022278 Functional Gain - KIAA2012 ENSG00000182329 CDS Human protein_coding chr2:202964426 chr2:202964426 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_104181 0 0 0 0 2 exosome 0 0.438718592995149 0.999895811080932 0 hPsi_site_3141 iPseU_CNN:0.999895811080932;iRNA_PseU:0 3142 chr3 140407030 140407030 1 + C T LGG 140407030 + 140407010 140407050 41 AAGGTACGCTCCTCAGGGGACTCCCTGCCCTCCCCCTACCC AAGGTACGCTCCTCAGGGGATTCCCTGCCCTCCCCCTACCC Direct Gain 0 0.959485490408482 0 0.437384426593781 prediction 0.918970980816965 Functional Gain - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140407030 chr3:140407030 synonymous SNV . 0 21 hPsi_associated_SNPs_104182 0 0 0 0 0 exosome 0 0.438718592995102 0 0 hPsi_site_3142 iPseU_CNN:0;iRNA_PseU:0 3143 chr9 138664586 138664586 1 + C T rs369983077 138664586 + 138664566 138664606 41 GTGGCCATGGACCTGCAGGGCACAGAGCACCGGCCTACGCA GTGGCCATGGACCTGCAGGGTACAGAGCACCGGCCTACGCA Direct Gain 0 0.959482870077837 0 0.999800980091095 prediction 0.918965740155675 Functional Gain - KCNT1 ENSG00000107147 CDS Human protein_coding chr9:138664586 chr9:138664586 synonymous SNV . 0 21 hPsi_associated_SNPs_104183 3 0 0 0 1 exosome 0 0.438718598558171 0.99960196018219 0 hPsi_site_3143 iPseU_CNN:0.99960196018219;iRNA_PseU:0 3144 chr7 143807605 143807605 1 + G A SKCM 143807605 - 143807585 143807625 41 CAAAGCCCATACACCGTTCTCATGGACCTCTTCCTCTGGAG CAAAGCCCATACACCGTTCTTATGGACCTCTTCCTCTGGAG Direct Gain 0 0.959480743324882 0 0.973290801048279 prediction 0.918961486649763 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807605 chr7:143807605 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104184 0 0 0 0 0 unknown 0 0.438718501513718 0.946581602096558 0 hPsi_site_3144 iPseU_CNN:0.946581602096558;iRNA_PseU:0 3145 chr18 73837680 73837680 1 + C T rs140752367 73837680 + 73837660 73837700 41 TTGTAGAGATGGGTTTTCGCCATGTTGCCCAGGCTGGTCTC TTGTAGAGATGGGTTTTCGCTATGTTGCCCAGGCTGGTCTC Direct Gain 0 0.959478694334151 0 0.99283504486084 prediction 0.918957388668301 Functional Gain - LOC339298 ENSG00000263547 ncRNA_exonic Human processed_transcript chr18:73837680 chr18:73837680 . . 0 21 hPsi_associated_SNPs_104185 0 0 0 0 1 unknown 0 0.438692972196782 0.98567008972168 0 hPsi_site_3145 iPseU_CNN:0.98567008972168;iRNA_PseU:0 3146 chr1 171244613 171244613 1 + T A SKCM 171244613 - 171244593 171244633 41 AGTGGCAAATAAGGATTAGTAAGAAAGCCAGTGCAGACCAT AGTGGCAAATAAGGATTAGTTAGAAAGCCAGTGCAGACCAT Direct Gain 0 0.95947739028477 0 0.895347833633423 prediction 0.91895478056954 Functional Gain - FMO1 ENSG00000010932 CDS Human protein_coding chr1:171244613 chr1:171244613 synonymous SNV . 0 21 hPsi_associated_SNPs_104186 0 0 0 0 0 Cytosol 0 0.438724421838265 0.790695667266846 0 hPsi_site_3146 iPseU_CNN:0.790695667266846;iRNA_PseU:0 3147 chr2 215301398 215301398 1 + C A COAD 215301398 - 215301378 215301418 41 GCAGTCTGCTACAACACAGTGAACTTCATTGCTGGGCTCAC GCAGTCTGCTACAACACAGTTAACTTCATTGCTGGGCTCAC Direct Gain 0 0.959460000644509 0 0.817911088466644 prediction 0.918920001289018 Functional Gain - VWC2L ENSG00000174453 CDS Human protein_coding chr2:215301398 chr2:215301398 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104187 0 0 0 0 0 cytosol 0 0.455197571386681 0.635822176933288 0 hPsi_site_3147 iPseU_CNN:0.635822176933288;iRNA_PseU:0 3148 chr2 232143132 232143132 1 + C T BLCA 232143132 + 232143112 232143152 41 AAGGTGGCAGGCCTCGTGCTCAAAGTCCTTTCGGATCTTCT AAGGTGGCAGGCCTCGTGCTTAAAGTCCTTTCGGATCTTCT Direct Gain 0 0.95945311615962 0 0.999961376190186 prediction 0.918906232319239 Functional Gain - ARMC9 ENSG00000135931 CDS Human protein_coding chr2:232143132 chr2:232143132 synonymous SNV . 0 21 hPsi_associated_SNPs_104188 0 0 0 0 2 membrane 0 0.438731666834162 0.999922752380372 0 hPsi_site_3148 iPseU_CNN:0.999922752380372;iRNA_PseU:0 3149 chr17 72278016 72278016 1 + C A LGG 72278016 - 72277996 72278036 41 AGCTCGGCCTGGCGGTCCGAGAAATTGCACTGCTTCCCGAA AGCTCGGCCTGGCGGTCCGATAAATTGCACTGCTTCCCGAA Direct Gain 0 0.959451693586256 0 0.999748229980469 prediction 0.918903387172512 Functional Gain - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72278016 chr17:72278016 nonsynonymous SNV 0.844 4 21 hPsi_associated_SNPs_104189 0 0 0 0 0 exosome 0 0.438718591612286 0.999496459960938 0 hPsi_site_3149 iPseU_CNN:0.999496459960938;iRNA_PseU:0 3150 chr17 28886493 28886493 1 + C T rs188679161 28886493 + 28886473 28886513 41 TCCAGGGGATGTTCCCACCCCTCCTCCCCAGGGCCAAGGCC TCCAGGGGATGTTCCCACCCTTCCTCCCCAGGGCCAAGGCC Direct Gain 0 0.959450376899718 0 0.966176390647888 prediction 0.918900753799436 Functional Gain - TBC1D29 ENSG00000266733 UTR5 Human protein_coding chr17:28886493 chr17:28886493 . . 0 21 hPsi_associated_SNPs_104190 0 0 0 0 0 exosome 0 0.438427075387377 0.932352781295776 0 hPsi_site_3150 iPseU_CNN:0.932352781295776;iRNA_PseU:0 3151 chr6 168431493 168431493 1 + G T UCEC 168431493 + 168431473 168431513 41 CTCAGAGCGCGGTCTTTGGAGATGTGTGCCCCCTACTCACT CTCAGAGCGCGGTCTTTGGATATGTGTGCCCCCTACTCACT Direct Gain 0 0.959443980167154 0 0.996622502803802 prediction 0.918887960334309 Functional Gain - KIF25 ENSG00000125337 CDS Human protein_coding chr6:168431493 chr6:168431493 nonsynonymous SNV 0.038 3 21 hPsi_associated_SNPs_104191 0 0 0 0 1 exosome 0 0.43871737867677 0.993245005607604 0 hPsi_site_3151 iPseU_CNN:0.993245005607604;iRNA_PseU:0 3152 chr17 34854726 34854726 1 + C T rs140058153 34854726 + 34854706 34854746 41 GAGTTGCTTATACCACTCTTCACCTACATAACCACCCTGCA GAGTTGCTTATACCACTCTTTACCTACATAACCACCCTGCA Direct Gain 0 0.959441372884006 0 0.997531890869141 prediction 0.918882745768012 Functional Gain - ZNHIT3 ENSG00000108278 UTR3 Human other chr17:34854726 chr17:34854726 . . 0 21 hPsi_associated_SNPs_104192 0 0 1 0 0 Cytosol 0 0.438718662282011 0.995063781738282 0 hPsi_site_3152 iPseU_CNN:0.995063781738282;iRNA_PseU:0 3153 chr1 107867059 107867059 1 + C A LUSC 107867059 - 107867039 107867079 41 GTTTTGCTCCAAGACAGAGTGATGTTAACCTGGAGAGGCTT GTTTTGCTCCAAGACAGAGTTATGTTAACCTGGAGAGGCTT Direct Gain 0 0.95942194638993 0 0.960752248764038 prediction 0.91884389277986 Functional Gain - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107867059 chr1:107867059 synonymous SNV . 0 21 hPsi_associated_SNPs_104193 0 0 0 0 0 exosome 0 0.438718007767179 0.921504497528076 0 hPsi_site_3153 iPseU_CNN:0.921504497528076;iRNA_PseU:0 3154 chr19 18276981 18276981 1 + G A OV 18276981 - 18276961 18277001 41 GCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAG GCCTCAATTGCAGTACGCTTTATCTGCAGCTCCTGGAGGAG Direct Gain 0 0.959420348117689 0 0.999309182167053 prediction 0.918840696235377 Functional Gain - PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18276981 chr19:18276981 nonsynonymous SNV 0.992 2 21 hPsi_associated_SNPs_104194 0 0 0 0 0 Cytosol 0 0.439680772083297 0.998618364334106 0 hPsi_site_3154 iPseU_CNN:0.998618364334106;iRNA_PseU:0 3155 chr5 137721882 137721882 1 + G A BRCA 137721882 - 137721862 137721902 41 CCAGGGCCCTCGGCTTGCCTCACCTCCATCGCTCCCATTAC CCAGGGCCCTCGGCTTGCCTTACCTCCATCGCTCCCATTAC Direct Gain 0 0.959418115198181 0 0.992310762405396 prediction 0.918836230396361 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137721882 chr5:137721882 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104195 0 0 0 0 0 Nucleus 0 0.43871859387867 0.984621524810792 0 hPsi_site_3155 iPseU_CNN:0.984621524810792;iRNA_PseU:0 3156 chr1 240255958 240255958 1 + C A SKCM 240255958 - 240255938 240255978 41 GTAGCCGAATGGAAGCTATAGATGTCCGTGTCCGAGCCCGA GTAGCCGAATGGAAGCTATATATGTCCGTGTCCGAGCCCGA Direct Gain 0 0.959413554527838 0 0.983440518379211 prediction 0.918827109055676 Functional Gain - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240255958 chr1:240255958 synonymous SNV . 0 21 hPsi_associated_SNPs_104196 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593841865 0.966881036758422 0 hPsi_site_3156 iPseU_CNN:0.966881036758422;iRNA_PseU:0 3157 chr7 39379586 39379586 1 + C T SKCM 39379586 + 39379566 39379606 41 TCCAGGACATGGCCTGCCTTCACCGCTCACGCCACCCAATC TCCAGGACATGGCCTGCCTTTACCGCTCACGCCACCCAATC Direct Gain 0 0.959412578399369 0 0.999923169612885 prediction 0.918825156798737 Functional Gain - POU6F2 ENSG00000106536 CDS Human protein_coding chr7:39379586 chr7:39379586 nonsynonymous SNV 0.986 2 21 hPsi_associated_SNPs_104197 0 0 0 0 1 chromatin 0 0.438718575209629 0.99984633922577 0 hPsi_site_3157 iPseU_CNN:0.99984633922577;iRNA_PseU:0 3158 chr8 68992750 68992750 1 + C A OV 68992750 - 68992730 68992770 41 TAAGTCGATGTTTCATATTTGATCCCTCCATTTCCTCATCC TAAGTCGATGTTTCATATTTTATCCCTCCATTTCCTCATCC Direct Gain 0 0.959410378415759 0 0.782527267932892 prediction 0.918820756831519 Functional Gain - PREX2 ENSG00000046889 CDS Human protein_coding chr8:68992750 chr8:68992750 stopgain 1.000 1 21 hPsi_associated_SNPs_104198 0 0 0 0 0 Nucleus 0 0.438718588410123 0.565054535865784 0 hPsi_site_3158 iPseU_CNN:0.565054535865784;iRNA_PseU:0 3159 chr3 55021748 55021748 1 + G A SKCM 55021748 - 55021728 55021768 41 CCCATTGTTAGCAATTTGTTCATCACAGCTCCCTCGATCTC CCCATTGTTAGCAATTTGTTTATCACAGCTCCCTCGATCTC Direct Gain 0 0.959406564568691 0 0.999984741210938 prediction 0.918813129137382 Functional Gain - CACNA2D3 ENSG00000157445 CDS Human protein_coding chr3:55021748 chr3:55021748 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104199 0 0 0 0 0 Nucleus 0 0.438719006560847 0.999969482421876 0 hPsi_site_3159 iPseU_CNN:0.999969482421876;iRNA_PseU:0 3160 chr2 71576199 71576199 1 + C T SKCM 71576199 + 71576179 71576219 41 TGAGGCCTGGATCTATGGGTCTCCCAAGATTTTACCCAGCA TGAGGCCTGGATCTATGGGTTTCCCAAGATTTTACCCAGCA Direct Gain 0 0.959399112066891 0 0.961413741111755 prediction 0.918798224133781 Functional Gain - ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71576199 chr2:71576199 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104200 0 0 1 0 0 Nucleus 0 0.438718593166883 0.92282748222351 0 hPsi_site_3160 iPseU_CNN:0.92282748222351;iRNA_PseU:0 3161 chr20 43559211 43559211 1 + G A UCEC 43559211 - 43559191 43559231 41 GCCAGTGCCACGTAGAGTGGCTTGGTGCCCACGATGCGCCC GCCAGTGCCACGTAGAGTGGTTTGGTGCCCACGATGCGCCC Direct Gain 0 0.959398380543986 0 0.997418940067291 prediction 0.918796761087973 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43559211 chr20:43559211 synonymous SNV . 0 21 hPsi_associated_SNPs_104201 0 0 0 0 0 chromatin 0 0.438726399568366 0.994837880134582 0 hPsi_site_3161 iPseU_CNN:0.994837880134582;iRNA_PseU:0 3162 chr17 72301390 72301390 1 + C T UCEC 72301390 + 72301370 72301410 41 ATGGTGGGGACCGAGCAGGGCATCGTCATCTCCTGCAACCG ATGGTGGGGACCGAGCAGGGTATCGTCATCTCCTGCAACCG Direct Gain 0 0.95938945211229 0 0.999521374702454 prediction 0.91877890422458 Functional Gain - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72301390 chr17:72301390 synonymous SNV . 0 21 hPsi_associated_SNPs_104202 0 0 0 2 1 exosome 0 0.438712506887674 0.999042749404908 0 hPsi_site_3162 iPseU_CNN:0.999042749404908;iRNA_PseU:0 3163 chr17 80708607 80708607 1 + C T rs149413139 80708607 + 80708587 80708627 41 TACAGGAGCCCTTCCTTGGGCACCATGCGAAGGCTGCTCAA TACAGGAGCCCTTCCTTGGGTACCATGCGAAGGCTGCTCAA Direct Gain 0 0.959388836868365 0 0.988179385662079 prediction 0.918777673736731 Functional Gain - FN3K ENSG00000167363 CDS Human protein_coding chr17:80708607 chr17:80708607 synonymous SNV . 0 21 hPsi_associated_SNPs_104203 0 0 1 0 0 Nucleus 0 0.438718593034427 0.976358771324158 0 hPsi_site_3163 iPseU_CNN:0.976358771324158;iRNA_PseU:0 3164 chr19 36278085 36278085 1 + C T LUAD 36278085 + 36278065 36278105 41 TATAGGTCCTGATATGGAGTCACCACTGCCACCCCCTCCCC TATAGGTCCTGATATGGAGTTACCACTGCCACCCCCTCCCC Direct Gain 0 0.959388150053697 0 0.988197565078735 prediction 0.918776300107394 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278085 chr19:36278085 nonsynonymous SNV 0.866 2 21 hPsi_associated_SNPs_104204 0 0 1 0 1 chromatin 0 0.438718592981669 0.97639513015747 0 hPsi_site_3164 iPseU_CNN:0.97639513015747;iRNA_PseU:0 3165 chr8 77767234 77767234 1 + C T BLCA 77767234 + 77767214 77767254 41 CAAAGTCGGCCTTAGAAAGCCACATTCGCTCTCGGCACTGG CAAAGTCGGCCTTAGAAAGCTACATTCGCTCTCGGCACTGG Direct Gain 0 0.959387557251107 0 0.999995112419128 prediction 0.918775114502215 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77767234 chr8:77767234 nonsynonymous SNV 0.417 3 21 hPsi_associated_SNPs_104205 0 0 0 0 0 Ribosome 0 0.438718659665857 0.999990224838256 0 hPsi_site_3165 iPseU_CNN:0.999990224838256;iRNA_PseU:0 3166 chr19 56459312 56459312 1 + C T BRCA 56459312 + 56459292 56459332 41 TGACACCCCCATTCCCTTTTCATCCTCCTCCACTCACAGTT TGACACCCCCATTCCCTTTTTATCCTCCTCCACTCACAGTT Direct Gain 0 0.959375553234656 0 0.88543164730072 prediction 0.918751106469312 Functional Gain - NLRP8 ENSG00000179709 CDS Human protein_coding chr19:56459312 chr19:56459312 nonsynonymous SNV 0.011 2 21 hPsi_associated_SNPs_104206 0 0 0 0 0 unknown 0 0.438719417951716 0.77086329460144 0 hPsi_site_3166 iPseU_CNN:0.77086329460144;iRNA_PseU:0 3167 chr22 51043278 51043278 1 + G A rs3219201 51043278 - 51043258 51043298 41 ACCAGCTCCAGCTGCGTGTGCTCATCCACCACCAGCGTGTA ACCAGCTCCAGCTGCGTGTGTTCATCCACCACCAGCGTGTA Direct Gain 0 0.959373744836967 0 0.999963045120239 prediction 0.918747489673934 Functional Gain - MAPK8IP2 ENSG00000008735 CDS Human protein_coding chr22:51043278 chr22:51043278 synonymous SNV . 0 21 hPsi_associated_SNPs_104207 0 0 0 0 0 exosome 0 0.438795405625149 0.999926090240478 0 hPsi_site_3167 iPseU_CNN:0.999926090240478;iRNA_PseU:0 3168 chr12 51856477 51856477 1 + G A rs189680970 51856477 - 51856457 51856497 41 ACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGT ACCATGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAGGT Direct Gain 0 0.959370228424303 0 0.19463923573494 prediction 0.918740456848606 Functional Gain - SLC4A8 ENSG00000050438 intronic Human protein_coding chr12:51856477 chr12:51856477 . . 0 21 hPsi_associated_SNPs_104208 0 0 0 0 0 exosome 0 0.438711049011247 0 0 hPsi_site_3168 iPseU_CNN:0;iRNA_PseU:0 3169 chr15 91836297 91836297 1 + C T rs116512289 91836297 + 91836277 91836317 41 ATTTTCCACTCGAAAATTGACATAGTAGCATTGAGGATACT ATTTTCCACTCGAAAATTGATATAGTAGCATTGAGGATACT Direct Gain 0 0.959367354710149 0 0.956051468849182 prediction 0.918734709420299 Functional Gain - SV2B ENSG00000185518 UTR3 Human protein_coding chr15:91836297 chr15:91836297 . . 0 21 hPsi_associated_SNPs_104209 0 0 0 0 0 Cytosol 0 0.438801196612135 0.912102937698364 0 hPsi_site_3169 iPseU_CNN:0.912102937698364;iRNA_PseU:0 3170 chr19 58773203 58773203 1 + G A STAD 58773203 - 58773183 58773223 41 GAAGGATTTCCCACACAGGTCACACTCATAGGGCTTCTCTC GAAGGATTTCCCACACAGGTTACACTCATAGGGCTTCTCTC Direct Gain 0 0.959365586823162 0 0.98430860042572 prediction 0.918731173646324 Functional Gain - ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773203 chr19:58773203 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_104210 0 0 0 0 0 chromatin 0 0.434718115657475 0.96861720085144 0 hPsi_site_3170 iPseU_CNN:0.96861720085144;iRNA_PseU:0 3171 chr19 18976551 18976551 1 + G A CESC 18976551 - 18976531 18976571 41 TGGGAGAGGCCGGGCTGGCTCATCTGGGAAGGCTGGCTCAT TGGGAGAGGCCGGGCTGGCTTATCTGGGAAGGCTGGCTCAT Direct Gain 0 0.959360964818637 0 0.946089029312134 prediction 0.918721929637273 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18976551 chr19:18976551 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104211 0 0 0 0 0 Nucleus 0 0.438718592974968 0.892178058624268 0 hPsi_site_3171 iPseU_CNN:0.892178058624268;iRNA_PseU:0 3172 chr19 9204055 9204055 1 + C T LUAD 9204055 + 9204035 9204075 41 GTCGTGGGGAACCTGCTCATCATCCTGGCCATCAGCATAGA GTCGTGGGGAACCTGCTCATTATCCTGGCCATCAGCATAGA Direct Gain 0 0.959352939605097 0 0.999981760978699 prediction 0.918705879210194 Functional Gain - OR1M1 ENSG00000170929 CDS Human protein_coding chr19:9204055 chr19:9204055 synonymous SNV . 0 21 hPsi_associated_SNPs_104212 0 0 0 0 0 unknown 0 0.438698320667412 0.999963521957398 0 hPsi_site_3172 iPseU_CNN:0.999963521957398;iRNA_PseU:0 3173 chr3 57261884 57261884 1 + C T rs576610110 57261884 + 57261864 57261904 41 GCTGTGGGCGGCAGCTGCGTCTCCTGCCACCGCCCTCCCTC GCTGTGGGCGGCAGCTGCGTTTCCTGCCACCGCCCTCCCTC Direct Gain 0 0.959349485386116 0 0.999486148357391 prediction 0.918698970772231 Functional Gain - APPL1 ENSG00000157500 UTR5 Human protein_coding chr3:57261884 chr3:57261884 . . 0 21 hPsi_associated_SNPs_104213 0 0 1 0 1 Cytosol 0 0.438719178785598 0.998972296714782 0 hPsi_site_3173 iPseU_CNN:0.998972296714782;iRNA_PseU:0 3174 chr22 50882308 50882308 1 + G T BLCA 50882308 + 50882288 50882328 41 CACACAGGGTCGGGTGTGCTGACAGCCGGCTGTTAAGCCCT CACACAGGGTCGGGTGTGCTTACAGCCGGCTGTTAAGCCCT Direct Gain 0 0.959349029361526 0 0.99203634262085 prediction 0.918698058723052 Functional Gain - PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50882308 chr22:50882308 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_104214 0 0 1 0 0 Ribosome 0 0.438630400763232 0.9840726852417 0 hPsi_site_3174 iPseU_CNN:0.9840726852417;iRNA_PseU:0 3175 chr12 120894928 120894928 1 + G A BLCA 120894928 - 120894908 120894948 41 ATGGGAGTTTTGTAGTAATTCATCAGCACAGTTGCCTTCTA ATGGGAGTTTTGTAGTAATTTATCAGCACAGTTGCCTTCTA Direct Gain 0 0.959346922622908 0 0.908158421516418 prediction 0.918693845245815 Functional Gain - GATC ENSG00000111780;ENSG00000257218 CDS Human other chr12:120894928 chr12:120894928 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_104215 0 0 1 0 0 Ribosome 0 0.438400480090001 0.816316843032836 0 hPsi_site_3175 iPseU_CNN:0.816316843032836;iRNA_PseU:0 3176 chrX 123220506 123220506 1 + G A STAD 123220506 - 123220486 123220526 41 ACTAATGACTGACATGGTGTCATCATCACCACCAGCTAGCA ACTAATGACTGACATGGTGTTATCATCACCACCAGCTAGCA Direct Gain 0 0.959335190560618 0 0.739753127098083 prediction 0.918670381121236 Functional Gain - STAG2 ENSG00000101972 CDS Human protein_coding chrX:123220506 chrX:123220506 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104216 0 0 0 0 0 Nucleus 0 0.438946567967671 0.479506254196166 0 hPsi_site_3176 iPseU_CNN:0.479506254196166;iRNA_PseU:0 3177 chr19 55143114 55143114 1 + G A BLCA 55143114 - 55143094 55143134 41 ATGGGGAACTGGCCCTTCTTCACAAGCTCCTGTGGGATCCG ATGGGGAACTGGCCCTTCTTTACAAGCTCCTGTGGGATCCG Direct Gain 0 0.959334591483426 0 0.999999821186066 prediction 0.918669182966853 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55143114 chr19:55143114 synonymous SNV . 0 21 hPsi_associated_SNPs_104217 0 0 0 0 0 exosome 0 0.438729713328347 0.999999642372132 0 hPsi_site_3177 iPseU_CNN:0.999999642372132;iRNA_PseU:0 3178 chr2 88402600 88402600 1 + G T UCEC 88402600 + 88402580 88402620 41 TCTCAGGAAGTGGTGAAGGAGATGATACAATTCTCCAAGGA TCTCAGGAAGTGGTGAAGGATATGATACAATTCTCCAAGGA Direct Gain 0 0.959327805140724 0 0.816537976264954 prediction 0.918655610281448 Functional Gain - SMYD1 ENSG00000115593 CDS Human protein_coding chr2:88402600 chr2:88402600 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104218 0 0 0 0 2 exosome 0 0.442734644310444 0.633075952529908 0 hPsi_site_3178 iPseU_CNN:0.633075952529908;iRNA_PseU:0 3179 chr11 7530915 7530915 1 + G T UCEC 7530915 + 7530895 7530935 41 AACCAAGCAACTTCTAATGAGATAATCAAATATAACCTGCA AACCAAGCAACTTCTAATGATATAATCAAATATAACCTGCA Direct Gain 0 0.959322230596804 0 0.957596004009247 prediction 0.918644461193608 Functional Gain - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7530915 chr11:7530915 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_104219 0 0 0 0 0 exosome 0 0.438718593002176 0.915192008018494 0 hPsi_site_3179 iPseU_CNN:0.915192008018494;iRNA_PseU:0 3180 chr15 40558120 40558120 1 + C A OV 40558120 - 40558100 40558140 41 CGCAGGGTGTTGGAGCTGATGACTGACAACTTCTGGATGTC CGCAGGGTGTTGGAGCTGATTACTGACAACTTCTGGATGTC Direct Gain 0 0.959315959329619 0 0.0758187770843506 prediction 0.918631918659238 Functional Gain - BUB1B-PAK6;PAK6 ENSG00000137843 CDS Human protein_coding chr15:40558120 chr15:40558120 synonymous SNV . 0 21 hPsi_associated_SNPs_104220 0 0 0 0 0 unknown 0 0.426863713010575 0 0 hPsi_site_3180 iPseU_CNN:0;iRNA_PseU:0 3181 chr11 55890356 55890356 1 + G A rs61746318 55890356 - 55890336 55890376 41 GTGATGAATTATGTTTGAGTCACAGAAATGCAATCTGCTCA GTGATGAATTATGTTTGAGTTACAGAAATGCAATCTGCTCA Direct Gain 0 0.959314899955973 0 0.951752007007599 prediction 0.918629799911946 Functional Gain - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55890356 chr11:55890356 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_104221 0 0 0 0 0 unknown 0 0.439337468450523 0.903504014015198 0 hPsi_site_3181 iPseU_CNN:0.903504014015198;iRNA_PseU:0 3182 chr21 43443001 43443001 1 + C A rs370132714 43443001 - 43442981 43443021 41 AAAGTGCTGGGATTCTAGGCGTGAGCCTCCGCGCCCGGGCA AAAGTGCTGGGATTCTAGGCTTGAGCCTCCGCGCCCGGGCA Direct Gain 0 0.959314226209358 0 0.419419169425964 prediction 0.918628452418715 Functional Gain - ZNF295-AS1 ENSG00000237232 ncRNA_exonic Human lincRNA chr21:43443001 chr21:43443001 . . 0 21 hPsi_associated_SNPs_104222 0 0 0 0 0 unknown 0 0.438718537059776 0 0 hPsi_site_3182 iPseU_CNN:0;iRNA_PseU:0 3183 chr12 109525305 109525305 1 + G A rs11836795 109525305 - 109525285 109525325 41 GCAGGACGGACCGTACAGTTCAAGCTGCCCCTTGCACCCTG GCAGGACGGACCGTACAGTTTAAGCTGCCCCTTGCACCCTG Direct Gain 0 0.9593142241289 0 0.711039900779724 prediction 0.918628448257801 Functional Gain - USP30 ENSG00000135093 UTR3 Human protein_coding chr12:109525305 chr12:109525305 . . 0 21 hPsi_associated_SNPs_104223 0 0 0 0 0 Endoplasmic reticulum 0 0.438711997256424 0.422079801559448 0 hPsi_site_3183 iPseU_CNN:0.422079801559448;iRNA_PseU:0 3184 chr1 18808267 18808267 1 + C T SKCM 18808267 + 18808247 18808287 41 TCCTCCTATACCTTCTCATCCATAGCCCGCGTCCGAATGGA TCCTCCTATACCTTCTCATCTATAGCCCGCGTCCGAATGGA Direct Gain 0 0.959312104350343 0 0.990352392196655 prediction 0.918624208700686 Functional Gain - KLHDC7A ENSG00000179023 CDS Human protein_coding chr1:18808267 chr1:18808267 synonymous SNV . 0 21 hPsi_associated_SNPs_104224 0 0 0 0 0 Cytosol 0 0.438718592726266 0.98070478439331 0 hPsi_site_3184 iPseU_CNN:0.98070478439331;iRNA_PseU:0 3185 chr6 29627371 29627371 1 + G A LUSC 29627371 - 29627351 29627391 41 GAAGCAGGTGAAACCTCCTTCATCTGAGAACCTTACATTCC GAAGCAGGTGAAACCTCCTTTATCTGAGAACCTTACATTCC Direct Gain 0 0.959311247804492 0 0.999696671962738 prediction 0.918622495608984 Functional Gain - MOG ENSG00000204655 CDS Human protein_coding chr6:29627371 chr6:29627371 nonsynonymous SNV 0.951 4 21 hPsi_associated_SNPs_104225 0 0 0 0 0 unknown 0 0.43871880297784 0.999393343925476 0 hPsi_site_3185 iPseU_CNN:0.999393343925476;iRNA_PseU:0 3186 chr1 2160478 2160478 1 + C T STAD 2160478 + 2160458 2160498 41 GTGCTGCCCGGGCCCTTCTTCATGCCGTCCGACCGCTCCAC GTGCTGCCCGGGCCCTTCTTTATGCCGTCCGACCGCTCCAC Direct Gain 0 0.959308705158103 0 0.999977052211761 prediction 0.918617410316206 Functional Gain - SKI ENSG00000157933 CDS Human protein_coding chr1:2160478 chr1:2160478 synonymous SNV . 0 21 hPsi_associated_SNPs_104226 0 0 1 0 0 Endoplasmic reticulum 0 0.438761173145591 0.999954104423522 0 hPsi_site_3186 iPseU_CNN:0.999954104423522;iRNA_PseU:0 3187 chr1 178871301 178871301 1 + G A BLCA 178871301 - 178871281 178871321 41 GAGATCAGGATGTTCAGGGTCATCAGCCATCATCACCATCC GAGATCAGGATGTTCAGGGTTATCAGCCATCATCACCATCC Direct Gain 0 0.959308450400593 0 0.0165447294712067 prediction 0.918616900801187 Functional Gain - RALGPS2 ENSG00000116191 CDS Human protein_coding chr1:178871301 chr1:178871301 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104227 0 0 0 0 0 Ribosome 0 0.441579188050654 0 0 hPsi_site_3187 iPseU_CNN:0;iRNA_PseU:0 3188 chr20 57290013 57290013 1 + C T rs6070558 57290013 + 57289993 57290033 41 GAAGGCAGAGCACACAGGGCCTTGCCCCCTGCCTACGCCTG GAAGGCAGAGCACACAGGGCTTTGCCCCCTGCCTACGCCTG Direct Gain 0 0.959304495325139 0 0.995347023010254 prediction 0.918608990650278 Functional Gain - STX16-NPEPL1 ENSG00000215440;ENSG00000254995 intronic Human other chr20:57290013 chr20:57290013 . . 0 21 hPsi_associated_SNPs_104228 0 0 0 0 0 exosome 0 0.438719144437471 0.990694046020508 0 hPsi_site_3188 iPseU_CNN:0.990694046020508;iRNA_PseU:0 3189 chr6 132468074 132468074 1 + G A rs150408837 132468074 - 132468054 132468094 41 TAGCTGGCCGTCTTCTTGCTCATGTGTCTTCTTATGATTGA TAGCTGGCCGTCTTCTTGCTTATGTGTCTTCTTATGATTGA Direct Gain 0 0.95930047305037 0 0.261363863945007 prediction 0.91860094610074 Functional Gain - LINC01013 ENSG00000228495 ncRNA_exonic Human lincRNA chr6:132468074 chr6:132468074 . . 0 21 hPsi_associated_SNPs_104229 0 0 0 0 0 unknown 0 0.438717844519344 0 0 hPsi_site_3189 iPseU_CNN:0;iRNA_PseU:0 3190 chr10 104121537 104121537 1 + G A CHOL 104121537 - 104121517 104121557 41 GCCTCCAGTGCCATCTCCTTCATCTCATAAGGCATCTTGGG GCCTCCAGTGCCATCTCCTTTATCTCATAAGGCATCTTGGG Direct Gain 0 0.959290577762157 0 0.425694644451141 prediction 0.918581155524314 Functional Gain - GBF1 ENSG00000107862 CDS Human protein_coding chr10:104121537 chr10:104121537 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104230 0 0 0 0 0 Nucleus 0 0.438718598962617 0 0 hPsi_site_3190 iPseU_CNN:0;iRNA_PseU:0 3191 chr9 132854572 132854572 1 + G T UCEC 132854572 + 132854552 132854592 41 ACAGCTACCTCTCAGCAGGAGAAATTCCTCTCCCCAAATTA ACAGCTACCTCTCAGCAGGATAAATTCCTCTCCCCAAATTA Direct Gain 0 0.959285894735806 0 0.999910473823547 prediction 0.918571789471612 Functional Gain - GPR107 ENSG00000148358 CDS Human protein_coding chr9:132854572 chr9:132854572 stopgain 1.000 1 21 hPsi_associated_SNPs_104231 0 0 1 0 2 Ribosome 0 0.438719077142833 0.999820947647094 0 hPsi_site_3191 iPseU_CNN:0.999820947647094;iRNA_PseU:0 3192 chr8 77764458 77764458 1 + G A CESC 77764458 - 77764438 77764478 41 AAGGAGCCAGCCATTCCTGTCATGCCAGGCATCCCAAATGT AAGGAGCCAGCCATTCCTGTTATGCCAGGCATCCCAAATGT Direct Gain 0 0.959282326528912 0 0.99965763092041 prediction 0.918564653057824 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77764458 chr8:77764458 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_104232 0 0 0 0 0 Ribosome 0 0.438718736334494 0.99931526184082 0 hPsi_site_3192 iPseU_CNN:0.99931526184082;iRNA_PseU:0 3193 chr16 1814208 1814208 1 + G A UCEC 1814208 - 1814188 1814228 41 GGTCCTCGCGGGCTCACCTTCATGGTGGGGTCCTTCTCCAC GGTCCTCGCGGGCTCACCTTTATGGTGGGGTCCTTCTCCAC Direct Gain 0 0.959280713164527 0 0.997862577438354 prediction 0.918561426329054 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1814208 chr16:1814208 nonsynonymous SNV 0.926 2 21 hPsi_associated_SNPs_104233 0 0 0 0 0 chromatin 0 0.438718592994899 0.995725154876708 0 hPsi_site_3193 iPseU_CNN:0.995725154876708;iRNA_PseU:0 3194 chr3 58083628 58083628 1 + C A OV 58083628 - 58083608 58083648 41 AACCCTGGACCTTTTGCAGTGACTTTACTGGCATCTCCCTG AACCCTGGACCTTTTGCAGTTACTTTACTGGCATCTCCCTG Direct Gain 0 0.959278733200586 0 0.999317407608032 prediction 0.918557466401172 Functional Gain - FLNB ENSG00000136068 CDS Human protein_coding chr3:58083628 chr3:58083628 synonymous SNV . 0 21 hPsi_associated_SNPs_104234 0 0 0 0 0 Cytosol 0 0.43867249437209 0.998634815216064 0 hPsi_site_3194 iPseU_CNN:0.998634815216064;iRNA_PseU:0 3195 chr2 168103341 168103341 1 + G A LUSC 168103341 - 168103321 168103361 41 AAAACCTTAACTGTGTTATGCACATCTCCAGGGATGATGTC AAAACCTTAACTGTGTTATGTACATCTCCAGGGATGATGTC Direct Gain 0 0.959262407569606 0 0.99490749835968 prediction 0.918524815139212 Functional Gain - XIRP2 ENSG00000163092 CDS Human protein_coding chr2:168103341 chr2:168103341 synonymous SNV . 0 21 hPsi_associated_SNPs_104235 0 0 0 0 0 exosome 0 0.438718616671997 0.98981499671936 0 hPsi_site_3195 iPseU_CNN:0.98981499671936;iRNA_PseU:0 3196 chr9 135553771 135553771 1 + C T UCEC 135553771 + 135553751 135553791 41 GTCAGAATGGAGTGGTCGGGCATCTGTACCACCCAGCAGGT GTCAGAATGGAGTGGTCGGGTATCTGTACCACCCAGCAGGT Direct Gain 0 0.959255036231725 0 0.99944531917572 prediction 0.918510072463451 Functional Gain - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135553771 chr9:135553771 synonymous SNV . 0 21 hPsi_associated_SNPs_104236 0 0 1 0 0 Ribosome 0 0.438772137551118 0.99889063835144 0 hPsi_site_3196 iPseU_CNN:0.99889063835144;iRNA_PseU:0 3197 chr5 167627103 167627103 1 + G A STAD 167627103 - 167627083 167627123 41 GAGTCCATACACCCTTTGGCCATACGCATCTGTCTTGTCCC GAGTCCATACACCCTTTGGCTATACGCATCTGTCTTGTCCC Direct Gain 0 0.959229079397599 0 0.249119460582733 prediction 0.918458158795199 Functional Gain - TENM2 ENSG00000145934 CDS Human protein_coding chr5:167627103 chr5:167627103 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_104237 0 0 0 0 0 exosome 0 0.437673865973148 0 0 hPsi_site_3197 iPseU_CNN:0;iRNA_PseU:0 3198 chr16 31089880 31089880 1 + G A UCEC 31089880 - 31089860 31089900 41 TTATCACCCTGGAAATGGGTCTCATCCCTCTCAAGCCCACA TTATCACCCTGGAAATGGGTTTCATCCCTCTCAAGCCCACA Direct Gain 0 0.959187392063444 0 1 prediction 0.918374784126889 Functional Gain - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089880 chr16:31089880 synonymous SNV . 0 21 hPsi_associated_SNPs_104238 0 0 0 0 0 Endoplasmic reticulum 0 0.438673720022622 1 0 hPsi_site_3198 iPseU_CNN:1;iRNA_PseU:0 3199 chr19 7626392 7626392 1 + C T SKCM 7626392 + 7626372 7626412 41 AGGAGGAGGAGAAGTCGATTCTCCGGCAACGACGCTGTCTG AGGAGGAGGAGAAGTCGATTTTCCGGCAACGACGCTGTCTG Direct Gain 0 0.959185840773287 0 0.99363124370575 prediction 0.918371681546574 Functional Gain - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7626392 chr19:7626392 nonsynonymous SNV 0.479 1 21 hPsi_associated_SNPs_104239 0 0 1 0 1 Ribosome 0 0.438718588838707 0.9872624874115 0 hPsi_site_3199 iPseU_CNN:0.9872624874115;iRNA_PseU:0 3200 chr14 59113171 59113171 1 + G A SARC 59113171 - 59113151 59113191 41 TCATCTGGGAAGCGACACTTCTTGCTCCCGGCCCGCGTTTT TCATCTGGGAAGCGACACTTTTTGCTCCCGGCCCGCGTTTT Direct Gain 0 0.95918116475712 0 0.984352350234985 prediction 0.91836232951424 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113171 chr14:59113171 synonymous SNV . 0 21 hPsi_associated_SNPs_104240 0 0 0 0 0 exosome 0 0.438718592989042 0.96870470046997 0 hPsi_site_3200 iPseU_CNN:0.96870470046997;iRNA_PseU:0 3201 chr2 128941329 128941329 1 + G A UCEC 128941329 - 128941309 128941349 41 AAAGGCTGTTAGGGTCCTGACTCAGACCTTGGTACTGTCCC AAAGGCTGTTAGGGTCCTGATTCAGACCTTGGTACTGTCCC Direct Gain 0 0.959174908413935 0 0.984049081802368 prediction 0.918349816827871 Functional Gain - UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128941329 chr2:128941329 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_104241 0 0 0 0 0 Nucleus 0 0.438718561000645 0.968098163604736 0 hPsi_site_3201 iPseU_CNN:0.968098163604736;iRNA_PseU:0 3202 chr3 16237312 16237312 1 + C T SKCM 16237312 + 16237292 16237332 41 AGCCTGCCCACAGCCAGCGTCATCCTCTGTTTCCATGATGA AGCCTGCCCACAGCCAGCGTTATCCTCTGTTTCCATGATGA Direct Gain 0 0.959174204970008 0 0.999884784221649 prediction 0.918348409940016 Functional Gain - GALNT15 ENSG00000131386 CDS Human protein_coding chr3:16237312 chr3:16237312 synonymous SNV . 0 21 hPsi_associated_SNPs_104242 0 0 0 0 1 exosome 0 0.438680873114872 0.999769568443298 0 hPsi_site_3202 iPseU_CNN:0.999769568443298;iRNA_PseU:0 3203 chr16 14024686 14024686 1 + C T UCEC 14024686 + 14024666 14024706 41 CTCTCTCAGTATGATTGTGTCACATTTCTTAATCTTCTGGA CTCTCTCAGTATGATTGTGTTACATTTCTTAATCTTCTGGA Direct Gain 0 0.959173605662104 0 0.999679982662201 prediction 0.918347211324208 Functional Gain - ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14024686 chr16:14024686 synonymous SNV . 0 21 hPsi_associated_SNPs_104243 0 0 1 0 1 Nucleus 0 0.438635596498004 0.999359965324402 0 hPsi_site_3203 iPseU_CNN:0.999359965324402;iRNA_PseU:0 3204 chr11 61404818 61404818 1 + G A OV 61404818 - 61404798 61404838 41 GATCTGCGGACAGACACCGGCAACATTGCGGACACCCTCCA GATCTGCGGACAGACACCGGTAACATTGCGGACACCCTCCA Direct Gain 0 0.959165919775111 0 0.98935741186142 prediction 0.918331839550222 Functional Gain - RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404818 chr11:61404818 . . 0 21 hPsi_associated_SNPs_104244 0 0 0 0 0 unknown 0 0.43870889580891 0.97871482372284 0 hPsi_site_3204 iPseU_CNN:0.97871482372284;iRNA_PseU:0 3205 chr21 45789008 45789008 1 + G T rs535143712 45789008 + 45788988 45789028 41 CAGGCGTCAGGCTCCTGGGTGTCAGGTGCCCCTCAGTGCTG CAGGCGTCAGGCTCCTGGGTTTCAGGTGCCCCTCAGTGCTG Direct Gain 0 0.959164863512089 0 0.988288283348083 prediction 0.918329727024178 Functional Gain - TRPM2 ENSG00000142185 intronic Human protein_coding chr21:45789008 chr21:45789008 . . 0 21 hPsi_associated_SNPs_104245 0 0 0 0 0 Ribosome 0 0.437757578302397 0.976576566696166 0 hPsi_site_3205 iPseU_CNN:0.976576566696166;iRNA_PseU:0 3206 chr5 192310 192310 1 + G A STAD 192310 - 192290 192330 41 GCATGCAGCCGCACGTTGTGCACCACCTCCAGCTTGCGCAG GCATGCAGCCGCACGTTGTGTACCACCTCCAGCTTGCGCAG Direct Gain 0 0.959156812171022 0 0.981698870658875 prediction 0.918313624342045 Functional Gain - LRRC14B ENSG00000185028 CDS Human protein_coding chr5:192310 chr5:192310 synonymous SNV . 0 21 hPsi_associated_SNPs_104246 0 0 0 0 0 exosome 0 0.43840581870452 0.96339774131775 0 hPsi_site_3206 iPseU_CNN:0.96339774131775;iRNA_PseU:0 3207 chr3 147128794 147128794 1 + G T KIRP 147128794 + 147128774 147128814 41 ACATCCGCGTGCACACGGGCGAGAAGCCCTTTCCCTGCCCC ACATCCGCGTGCACACGGGCTAGAAGCCCTTTCCCTGCCCC Direct Gain 0 0.959128807762338 0 0.999135673046112 prediction 0.918257615524675 Functional Gain - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147128794 chr3:147128794 stopgain 0.975 1 21 hPsi_associated_SNPs_104247 0 0 0 0 1 exosome 0 0.43870677554309 0.998271346092224 0 hPsi_site_3207 iPseU_CNN:0.998271346092224;iRNA_PseU:0 3208 chr11 61404583 61404583 1 + C A LIHC 61404583 - 61404563 61404603 41 GCGCCCCTGGAGATTTTAGTGATGATACCTAAAGCCTGGAA GCGCCCCTGGAGATTTTAGTTATGATACCTAAAGCCTGGAA Direct Gain 0 0.959128279049691 0 0.0925168097019196 prediction 0.918256558099383 Functional Gain - RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404583 chr11:61404583 . . 0 21 hPsi_associated_SNPs_104248 0 0 0 0 0 unknown 0 0.438718592995102 0 0 hPsi_site_3208 iPseU_CNN:0;iRNA_PseU:0 3209 chr11 65267742 65267742 1 + G A BLCA 65267742 - 65267722 65267762 41 CTTCCGTTACGAAAGTCCTTCACATTTTTCAAACTAAGCTA CTTCCGTTACGAAAGTCCTTTACATTTTTCAAACTAAGCTA Direct Gain 0 0.959120011891582 0 0.815605640411377 prediction 0.918240023783164 Functional Gain - MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267742 chr11:65267742 . . 0 21 hPsi_associated_SNPs_104249 0 0 0 0 0 unknown 0 0.438718592995525 0.631211280822754 0 hPsi_site_3209 iPseU_CNN:0.631211280822754;iRNA_PseU:0 3210 chr11 1267383 1267383 1 + G A rs202142190 1267383 - 1267363 1267403 41 GAGGAGGGGTGGATTGTGGACATGGTGGCCATGGGTGTGGT GAGGAGGGGTGGATTGTGGATATGGTGGCCATGGGTGTGGT Direct Gain 0 0.959119342042566 0 0.887048482894897 prediction 0.918238684085132 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1267383 chr11:1267383 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104250 0 0 0 0 0 Endoplasmic reticulum 0 0.438769465442252 0.774096965789794 0 hPsi_site_3210 iPseU_CNN:0.774096965789794;iRNA_PseU:0 3211 chr11 92531738 92531738 1 + G A LUAD 92531738 - 92531718 92531758 41 TGGGGGCTACCACTGTCTCTCACATGCACATGAAAATGGAA TGGGGGCTACCACTGTCTCTTACATGCACATGAAAATGGAA Direct Gain 0 0.959110928335515 0 0.999936878681183 prediction 0.91822185667103 Functional Gain - FAT3 ENSG00000165323 CDS Human protein_coding chr11:92531738 chr11:92531738 synonymous SNV . 0 21 hPsi_associated_SNPs_104251 0 0 0 0 0 nucleoplasm 0 0.438719330829924 0.999873757362366 0 hPsi_site_3211 iPseU_CNN:0.999873757362366;iRNA_PseU:0 3212 chr6 36270168 36270168 1 + C A OV 36270168 - 36270148 36270188 41 AGAACTTCGGGGCAGTGTTTGAGGTGCCCCCACAGTTGAAG AGAACTTCGGGGCAGTGTTTTAGGTGCCCCCACAGTTGAAG Direct Gain 0 0.95911070044463 0 0.999246835708618 prediction 0.91822140088926 Functional Gain - PNPLA1 ENSG00000180316 CDS Human protein_coding chr6:36270168 chr6:36270168 nonsynonymous SNV 0.024 0 21 hPsi_associated_SNPs_104252 0 0 0 0 0 exosome 0 0.438718592995152 0.998493671417236 0 hPsi_site_3212 iPseU_CNN:0.998493671417236;iRNA_PseU:0 3213 chr11 6578477 6578477 1 + C T ESCA 6578477 + 6578457 6578497 41 GCGTCTTTGGTTGCATGAGGCACAGAGAACCTTTTGCGACC GCGTCTTTGGTTGCATGAGGTACAGAGAACCTTTTGCGACC Direct Gain 0 0.959108480024893 0 0.978936672210693 prediction 0.918216960049786 Functional Gain - DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6578477 chr11:6578477 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104253 0 0 1 0 0 chromatin 0 0.438718592995102 0.957873344421386 0 hPsi_site_3213 iPseU_CNN:0.957873344421386;iRNA_PseU:0 3214 chr10 70451227 70451227 1 + G A OV 70451227 - 70451207 70451247 41 AGCGTGCAGCTCTCGCCGGGCACACTCAATCAAAACCGAGC AGCGTGCAGCTCTCGCCGGGTACACTCAATCAAAACCGAGC Direct Gain 0 0.959107975997668 0 0.945332050323486 prediction 0.918215951995336 Functional Gain - TET1 ENSG00000138336 CDS Human protein_coding chr10:70451227 chr10:70451227 nonsynonymous SNV 0.836 4 21 hPsi_associated_SNPs_104254 0 0 0 0 0 chromatin 0 0.43871749576442 0.890664100646972 0 hPsi_site_3214 iPseU_CNN:0.890664100646972;iRNA_PseU:0 3215 chr2 207509337 207509337 1 + C T SKCM 207509337 + 207509317 207509357 41 TGGAGAGGAAGAGAAAATCTCAGCAGCGCAGCCACAGCACA TGGAGAGGAAGAGAAAATCTTAGCAGCGCAGCCACAGCACA Direct Gain 0 0.959102138242274 0 0.99694287776947 prediction 0.918204276484547 Functional Gain - FAM237A ENSG00000235118 ncRNA_exonic Human protein_coding chr2:207509337 chr2:207509337 . . 0 21 hPsi_associated_SNPs_104255 0 0 0 0 1 unknown 0 0.438554417126854 0.99388575553894 0 hPsi_site_3215 iPseU_CNN:0.99388575553894;iRNA_PseU:0 3216 chr17 59001795 59001795 1 + G A STAD 59001795 - 59001775 59001815 41 GAAGTGGGCCACAATGCCATCACTGTCAGAATCCTCACTCA GAAGTGGGCCACAATGCCATTACTGTCAGAATCCTCACTCA Direct Gain 0 0.95909217795723 0 0.325755566358566 prediction 0.91818435591446 Functional Gain - BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59001795 chr17:59001795 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104256 0 0 0 0 0 Cytosol 0 0.43871838404929 0 0 hPsi_site_3216 iPseU_CNN:0;iRNA_PseU:0 3217 chr19 44559263 44559263 1 + C T UCEC 44559263 + 44559243 44559283 41 TCTTCATGGCACTTTCCAGGCACAATTCTGCTTTCCCTGGA TCTTCATGGCACTTTCCAGGTACAATTCTGCTTTCCCTGGA Direct Gain 0 0.95908285930985 0 0.999969482421875 prediction 0.9181657186197 Functional Gain - ZNF223 ENSG00000267022 CDS Human protein_coding chr19:44559263 chr19:44559263 synonymous SNV . 0 21 hPsi_associated_SNPs_104257 0 0 0 0 2 chromatin 0 0.438718525814368 0.99993896484375 0 hPsi_site_3217 iPseU_CNN:0.99993896484375;iRNA_PseU:0 3218 chr15 91491055 91491055 1 + G T LUAD 91491055 + 91491035 91491075 41 AAGCTCGGTTCGGCTGGAGGGACTGACTTCAGCATGAAGCA AAGCTCGGTTCGGCTGGAGGTACTGACTTCAGCATGAAGCA Direct Gain 0 0.959082473523712 0 0.992843747138977 prediction 0.918164947047425 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91491055 chr15:91491055 synonymous SNV . 0 21 hPsi_associated_SNPs_104258 0 0 1 0 2 Nucleus 0 0.438722959991143 0.985687494277954 0 hPsi_site_3218 iPseU_CNN:0.985687494277954;iRNA_PseU:0 3219 chr17 43311481 43311481 1 + G T COAD 43311481 + 43311461 43311501 41 AACGGGGCTTCCAACTCAGAGAAAAACAAGCCCCTGGAGCA AACGGGGCTTCCAACTCAGATAAAAACAAGCCCCTGGAGCA Direct Gain 0 0.95908001653978 0 0.496872842311859 prediction 0.918160033079561 Functional Gain - FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43311481 chr17:43311481 nonsynonymous SNV 0.734 0 21 hPsi_associated_SNPs_104259 0 0 1 0 2 chromatin 0 0.438718702514911 0 0 hPsi_site_3219 iPseU_CNN:0;iRNA_PseU:0 3220 chr13 99087937 99087937 1 + G T ESCA 99087937 + 99087917 99087957 41 AGAAAGATTTGATTGGCATTGACAATCTTGTGGTTCCGGGA AGAAAGATTTGATTGGCATTTACAATCTTGTGGTTCCGGGA Direct Gain 0 0.959079210202814 0 0.999980211257935 prediction 0.918158420405628 Functional Gain - FARP1 ENSG00000152767 CDS Human protein_coding chr13:99087937 chr13:99087937 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_104260 0 0 1 0 0 Cytosol 0 0.438718593140679 0.99996042251587 0 hPsi_site_3220 iPseU_CNN:0.99996042251587;iRNA_PseU:0 3221 chr5 140625979 140625979 1 + C T SKCM 140625979 + 140625959 140625999 41 TGGGACAAATGGAGAGATATCATACTCCCTTTATTACAGCT TGGGACAAATGGAGAGATATTATACTCCCTTTATTACAGCT Direct Gain 0 0.959073229960884 0 0.874243259429932 prediction 0.918146459921768 Functional Gain - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140625979 chr5:140625979 nonsynonymous SNV 0.760 0 21 hPsi_associated_SNPs_104261 0 0 0 0 0 exosome 0 0.438718592323315 0.748486518859864 0 hPsi_site_3221 iPseU_CNN:0.748486518859864;iRNA_PseU:0 3222 chr5 38418247 38418247 1 + C A OV 38418247 - 38418227 38418267 41 GAAAGCCTCGGTTTGTCCCTGTTGCTCTAACCAACCAGTAA GAAAGCCTCGGTTTGTCCCTTTTGCTCTAACCAACCAGTAA Direct Gain 0 0.959071670202464 0 0.979011058807373 prediction 0.918143340404928 Functional Gain - EGFLAM ENSG00000164318 CDS Human protein_coding chr5:38418247 chr5:38418247 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_104262 0 0 0 0 0 Cytosol 0 0.438736881878294 0.958022117614746 0 hPsi_site_3222 iPseU_CNN:0.958022117614746;iRNA_PseU:0 3223 chr2 80831302 80831302 1 + C A LUSC 80831302 - 80831282 80831322 41 CCTTCCCTCTTCTATTACCTGATCAGCCACAGCACGAGCTA CCTTCCCTCTTCTATTACCTTATCAGCCACAGCACGAGCTA Direct Gain 0 0.959065290396386 0 0.357896775007248 prediction 0.918130580792771 Functional Gain - CTNNA2 ENSG00000066032 CDS Human protein_coding chr2:80831302 chr2:80831302 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_104263 0 0 0 0 0 nucleoplasm 0 0.438391302645045 0 0 hPsi_site_3223 iPseU_CNN:0;iRNA_PseU:0 3224 chr11 123777414 123777414 1 + C A STAD 123777414 - 123777394 123777434 41 ATCATGCATCCAGAATAGGAGATGGATCTATCTCTGCATAA ATCATGCATCCAGAATAGGATATGGATCTATCTCTGCATAA Direct Gain 0 0.959059970309735 0 0.999926924705505 prediction 0.91811994061947 Functional Gain - OR8D4 ENSG00000181518 CDS Human protein_coding chr11:123777414 chr11:123777414 synonymous SNV . 0 21 hPsi_associated_SNPs_104264 0 0 0 0 0 unknown 0 0.438785043200007 0.99985384941101 0 hPsi_site_3224 iPseU_CNN:0.99985384941101;iRNA_PseU:0 3225 chr16 2979770 2979770 1 + C T rs200866840 2979770 + 2979750 2979790 41 CCCAAGCCAGGCACGGACGTCATCCCGGCAGCCCCCAGGAA CCCAAGCCAGGCACGGACGTTATCCCGGCAGCCCCCAGGAA Direct Gain 0 0.959054196094884 0 0.247332245111465 prediction 0.918108392189769 Functional Gain - FLYWCH1 ENSG00000059122 CDS Human protein_coding chr16:2979770 chr16:2979770 synonymous SNV . 0 21 hPsi_associated_SNPs_104265 0 0 1 0 0 chromatin 0 0.438702092972596 0 0 hPsi_site_3225 iPseU_CNN:0;iRNA_PseU:0 3226 chr3 14862814 14862814 1 + G A SKCM 14862814 - 14862794 14862834 41 GGGCGGCCGGGAGCGGTCTTCAAAGGACTCCACTCTGGACA GGGCGGCCGGGAGCGGTCTTTAAAGGACTCCACTCTGGACA Direct Gain 0 0.959040292104056 0 0.968746900558472 prediction 0.918080584208112 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14862814 chr3:14862814 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_104266 0 0 0 0 0 Cytosol 0 0.438717107649941 0.937493801116944 0 hPsi_site_3226 iPseU_CNN:0.937493801116944;iRNA_PseU:0 3227 chr17 44949961 44949961 1 + G A SKCM 44949961 - 44949941 44949981 41 TTCAGCAGGTCACACTGCTTCAGGTGGGCCCCGCCCTGTGC TTCAGCAGGTCACACTGCTTTAGGTGGGCCCCGCCCTGTGC Direct Gain 0 0.9590397237815 0 0.998934745788574 prediction 0.918079447563001 Functional Gain - WNT9B ENSG00000158955 CDS Human protein_coding chr17:44949961 chr17:44949961 synonymous SNV . 0 21 hPsi_associated_SNPs_104267 0 0 0 0 0 exosome 0 0.438719637498751 0.997869491577148 0 hPsi_site_3227 iPseU_CNN:0.997869491577148;iRNA_PseU:0 3228 chr1 197890494 197890494 1 + C T COAD 197890494 + 197890474 197890514 41 ATTTCCGCCTCGGAGATGGTCATGCGCGCCCGAGACTCTGT ATTTCCGCCTCGGAGATGGTTATGCGCGCCCGAGACTCTGT Direct Gain 0 0.959034714456932 0 0.297424733638763 prediction 0.918069428913864 Functional Gain - LHX9 ENSG00000143355 CDS Human protein_coding chr1:197890494 chr1:197890494 synonymous SNV . 0 21 hPsi_associated_SNPs_104268 0 0 0 0 1 exosome 0 0.437420872697181 0 0 hPsi_site_3228 iPseU_CNN:0;iRNA_PseU:0 3229 chr1 113241079 113241079 1 + C T LUSC 113241079 + 113241059 113241099 41 AGCCCTCGAAGTGTGGGCGTCATCTCCCCGTACCGGAAACA AGCCCTCGAAGTGTGGGCGTTATCTCCCCGTACCGGAAACA Direct Gain 0 0.9590327894382 0 0.975970447063446 prediction 0.918065578876401 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113241079 chr1:113241079 synonymous SNV . 0 21 hPsi_associated_SNPs_104269 0 0 1 0 1 Cytosol 0 0.435487203386245 0.951940894126892 0 hPsi_site_3229 iPseU_CNN:0.951940894126892;iRNA_PseU:0 3230 chr21 43716401 43716401 1 + G A UCEC 43716401 - 43716381 43716421 41 GAAGTCCAGGTACAGCTTGGCATTTTCCACGTCCAGCTCCC GAAGTCCAGGTACAGCTTGGTATTTTCCACGTCCAGCTCCC Direct Gain 0 0.959031433885355 0 0.998254299163818 prediction 0.91806286777071 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43716401 chr21:43716401 nonsynonymous SNV 0.826 3 21 hPsi_associated_SNPs_104270 0 0 0 0 0 Cytosol 0 0.438718639311326 0.996508598327636 0 hPsi_site_3230 iPseU_CNN:0.996508598327636;iRNA_PseU:0 3231 chr2 74742182 74742182 1 + C A rs115897631 74742182 - 74742162 74742202 41 GGCAGCGGGCGGTGCGCAGGGACGCGGATCACGCCGCCTGG GGCAGCGGGCGGTGCGCAGGTACGCGGATCACGCCGCCTGG Direct Gain 0 0.95902419425261 0 1 prediction 0.91804838850522 Functional Gain - TLX2 ENSG00000115297 CDS Human protein_coding chr2:74742182 chr2:74742182 synonymous SNV . 0 21 hPsi_associated_SNPs_104271 0 0 0 0 0 exosome 0 0.438718589580944 1 0 hPsi_site_3231 iPseU_CNN:1;iRNA_PseU:0 3232 chr16 84482159 84482159 1 + C T SKCM 84482159 + 84482139 84482179 41 GATCAGGAAGACATTTACTTCATGAAAGGGGCCTTGGAAGA GATCAGGAAGACATTTACTTTATGAAAGGGGCCTTGGAAGA Direct Gain 0 0.959024157747178 0 0.895376324653625 prediction 0.918048315494355 Functional Gain - ATP2C2 ENSG00000064270 CDS Human protein_coding chr16:84482159 chr16:84482159 synonymous SNV . 0 21 hPsi_associated_SNPs_104272 0 0 0 0 1 Ribosome 0 0.438726418221844 0.79075264930725 0 hPsi_site_3232 iPseU_CNN:0.79075264930725;iRNA_PseU:0 3233 chr22 46403254 46403254 1 + C T rs547358064 46403254 + 46403234 46403274 41 GGGTGGGGGTGCCGCCTTTTCATGGGGCCAAGAGGGGCCCT GGGTGGGGGTGCCGCCTTTTTATGGGGCCAAGAGGGGCCCT Direct Gain 0 0.959007444425467 0 0.998215317726135 prediction 0.918014888850934 Functional Gain - LOC730668 ENSG00000188064;ENSG00000273145 intergenic Human other chr22:46403254 chr22:46403254 . . 0 21 hPsi_associated_SNPs_104273 0 0 0 0 0 unknown 0 0.438718592995108 0.99643063545227 0 hPsi_site_3233 iPseU_CNN:0.99643063545227;iRNA_PseU:0 3234 chr18 76829417 76829417 1 + G T LUAD 76829417 + 76829397 76829437 41 GGGGCGGTCGGAACATGGCGGACCAGATCCCGCTTTACCCG GGGGCGGTCGGAACATGGCGTACCAGATCCCGCTTTACCCG Direct Gain 0 0.959001247786048 0 0.989763259887695 prediction 0.918002495572096 Functional Gain - ATP9B ENSG00000166377 CDS Human protein_coding chr18:76829417 chr18:76829417 nonsynonymous SNV 0.344 3 21 hPsi_associated_SNPs_104274 0 0 1 0 0 Endoplasmic reticulum 0 0.438636183441164 0.97952651977539 0 hPsi_site_3234 iPseU_CNN:0.97952651977539;iRNA_PseU:0 3235 chr1 213302908 213302908 1 + G T COAD 213302908 + 213302888 213302928 41 ATCTGGTATCTCTTACTGTTGATGTGGATTCTCTTGCTGAG ATCTGGTATCTCTTACTGTTTATGTGGATTCTCTTGCTGAG Direct Gain 0 0.958992219419866 0 0.894515037536621 prediction 0.917984438839731 Functional Gain - RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213302908 chr1:213302908 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104275 0 0 1 0 1 Nucleus 0 0.438718592994541 0.789030075073242 0 hPsi_site_3235 iPseU_CNN:0.789030075073242;iRNA_PseU:0 3236 chrX 152991456 152991456 1 + C T LUAD 152991456 + 152991436 152991476 41 GGCACAGCCTGGCCCTCGGCCATCGCCGGCCTCGTGGTGTT GGCACAGCCTGGCCCTCGGCTATCGCCGGCCTCGTGGTGTT Direct Gain 0 0.9589908494505 0 0.999999582767487 prediction 0.917981698900999 Functional Gain - ABCD1 ENSG00000101986 CDS Human protein_coding chrX:152991456 chrX:152991456 synonymous SNV . 0 21 hPsi_associated_SNPs_104276 0 0 0 0 0 nucleolus 0 0.438575274608208 0.999999165534974 0 hPsi_site_3236 iPseU_CNN:0.999999165534974;iRNA_PseU:0 3237 chr14 22471369 22471369 1 + G A rs373662783 22471369 - 22471349 22471389 41 ATTTCTTTATGTTGTTGAGTCTTTGGCGGAATCTTCTACAA ATTTCTTTATGTTGTTGAGTTTTTGGCGGAATCTTCTACAA Direct Gain 0 0.958984804699883 0 0.999724984169006 prediction 0.917969609399766 Functional Gain - OR4E1;LINC02332 ENSG00000211798 UTR5 Human TR_V_gene chr14:22471369 chr14:22471369 . . 0 21 hPsi_associated_SNPs_104277 0 0 0 0 0 unknown 0 0.438632774018467 0.999449968338012 0 hPsi_site_3237 iPseU_CNN:0.999449968338012;iRNA_PseU:0 3238 chr7 102389902 102389902 1 + G A UCEC 102389902 - 102389882 102389922 41 GGGGCCTCACGGCCAGGTGGCACGGGAGCCGCGCCCGCAGC GGGGCCTCACGGCCAGGTGGTACGGGAGCCGCGCCCGCAGC Direct Gain 0 0.958981640209677 0 0.999828100204468 prediction 0.917963280419355 Functional Gain - FAM185A ENSG00000222011 CDS Human protein_coding chr7:102389902 chr7:102389902 nonsynonymous SNV 0.934 2 21 hPsi_associated_SNPs_104278 0 0 0 0 0 chromatin 0 0.438833234204721 0.999656200408936 0 hPsi_site_3238 iPseU_CNN:0.999656200408936;iRNA_PseU:0 3239 chr10 25464740 25464740 1 + C T rs149869555 25464740 + 25464720 25464760 41 GGGCGCTGGACACACTGACACACGCCACCAACTTCCTCAAC GGGCGCTGGACACACTGACATACGCCACCAACTTCCTCAAC Direct Gain 0 0.958979806150425 0 0.999850273132324 prediction 0.917959612300851 Functional Gain - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25464740 chr10:25464740 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104279 0 0 0 0 0 Endoplasmic reticulum 0 0.438774423966229 0.999700546264648 0 hPsi_site_3239 iPseU_CNN:0.999700546264648;iRNA_PseU:0 3240 chr16 84005572 84005572 1 + C T rs115409644 84005572 + 84005552 84005592 41 GAGGGGAGGGCCTCTGTCTGCAACATCCCTCATCAGTTCCC GAGGGGAGGGCCTCTGTCTGTAACATCCCTCATCAGTTCCC Direct Gain 0 0.958975052377821 0 0.283594310283661 prediction 0.917950104755643 Functional Gain - NECAB2 ENSG00000103154 UTR5 Human protein_coding chr16:84005572 chr16:84005572 . . 0 21 hPsi_associated_SNPs_104280 0 0 0 0 0 exosome 0 0.438720230208529 0 0 hPsi_site_3240 iPseU_CNN:0;iRNA_PseU:0 3241 chr3 35833953 35833953 1 + G A SKCM 35833953 - 35833933 35833973 41 GTTCCTTGTTGGTTATTTATCACGTTCTGACTCTGAGGTGG GTTCCTTGTTGGTTATTTATTACGTTCTGACTCTGAGGTGG Direct Gain 0 0.958974092876057 0 0.998521268367767 prediction 0.917948185752114 Functional Gain - ARPP21 ENSG00000172995 CDS Human protein_coding chr3:35833953 chr3:35833953 synonymous SNV . 0 21 hPsi_associated_SNPs_104281 0 0 0 0 0 Nucleus 0 0.438660762325645 0.997042536735534 0 hPsi_site_3241 iPseU_CNN:0.997042536735534;iRNA_PseU:0 3242 chr16 1818860 1818860 1 + G T rs371913796 1818860 + 1818840 1818880 41 CTGGCCCGACCTGTACATAGGACCCCCGACCACCTGACCCC CTGGCCCGACCTGTACATAGTACCCCCGACCACCTGACCCC Direct Gain 0 0.958973261733802 0 0.983938455581665 prediction 0.917946523467603 Functional Gain - MAPK8IP3 ENSG00000138834 UTR3 Human protein_coding chr16:1818860 chr16:1818860 . . 0 21 hPsi_associated_SNPs_104282 0 0 1 0 0 chromatin 0 0.442257435750824 0.96787691116333 0 hPsi_site_3242 iPseU_CNN:0.96787691116333;iRNA_PseU:0 3243 chr1 116670891 116670891 1 + C T SKCM 116670891 + 116670871 116670911 41 CGTAGGAAGTGTTTTCAGGTCATGAGGCACCTGAAGGAGGA CGTAGGAAGTGTTTTCAGGTTATGAGGCACCTGAAGGAGGA Direct Gain 0 0.958961403408884 0 0.823101997375488 prediction 0.917922806817769 Functional Gain - MAB21L3 ENSG00000173212 CDS Human protein_coding chr1:116670891 chr1:116670891 synonymous SNV . 0 21 hPsi_associated_SNPs_104283 0 0 0 0 1 nucleus 0 0.438718592995284 0.646203994750976 0 hPsi_site_3243 iPseU_CNN:0.646203994750976;iRNA_PseU:0 3244 chrX 29414544 29414544 1 + G T COAD 29414544 + 29414524 29414564 41 TACTGCCAACCAGAGAACCTGAAATCCTTTGGTACAAGGTA TACTGCCAACCAGAGAACCTTAAATCCTTTGGTACAAGGTA Direct Gain 0 0.958956801375305 0 0.998108863830566 prediction 0.91791360275061 Functional Gain - IL1RAPL1 ENSG00000169306 CDS Human protein_coding chrX:29414544 chrX:29414544 stopgain 1.000 1 21 hPsi_associated_SNPs_104284 0 0 0 0 1 exosome 0 0.439638539745059 0.996217727661132 0 hPsi_site_3244 iPseU_CNN:0.996217727661132;iRNA_PseU:0 3245 chr17 12642544 12642544 1 + G A SKCM 12642544 - 12642524 12642564 41 TGAGGCTGAGTCATTTCTGTCATTTTCTGAGCCAGAAGCAA TGAGGCTGAGTCATTTCTGTTATTTTCTGAGCCAGAAGCAA Direct Gain 0 0.958953108647948 0 0.999959349632263 prediction 0.917906217295897 Functional Gain - MYOCD ENSG00000141052;ENSG00000273452 CDS Human other chr17:12642544 chr17:12642544 nonsynonymous SNV 0.976 0 21 hPsi_associated_SNPs_104285 0 0 0 0 0 exosome 0 0.442224086405872 0.999918699264526 0 hPsi_site_3245 iPseU_CNN:0.999918699264526;iRNA_PseU:0 3246 chr10 129216713 129216713 1 + G T LIHC 129216713 + 129216693 129216733 41 GCATGGTGCAGCAGCACCTGGATGACCCCAGCCTGCCCATC GCATGGTGCAGCAGCACCTGTATGACCCCAGCCTGCCCATC Direct Gain 0 0.958942854281186 0 0.390552639961243 prediction 0.917885708562372 Functional Gain - DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129216713 chr10:129216713 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_104286 0 0 0 0 2 Nucleus 0 0.438356650237081 0 0 hPsi_site_3246 iPseU_CNN:0;iRNA_PseU:0 3247 chr1 248570286 248570286 1 + C T BLCA 248570286 + 248570266 248570306 41 TCTCTGTGTTTTACACCATTCTCACACCCATGCTGAACCCC TCTCTGTGTTTTACACCATTTTCACACCCATGCTGAACCCC Direct Gain 0 0.958941258765001 0 0.999510705471039 prediction 0.917882517530002 Functional Gain - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248570286 chr1:248570286 nonsynonymous SNV 0.082 2 21 hPsi_associated_SNPs_104287 0 0 0 0 0 unknown 0 0.438684061898254 0.999021410942078 0 hPsi_site_3247 iPseU_CNN:0.999021410942078;iRNA_PseU:0 3248 chr9 140137556 140137556 1 + G A SARC 140137556 - 140137536 140137576 41 GGCAGCCATCATGTTCTTGGCATCAAACATCTGCTGGGTGA GGCAGCCATCATGTTCTTGGTATCAAACATCTGCTGGGTGA Direct Gain 0 0.958929317094186 0 0.937142372131348 prediction 0.917858634188373 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137556 chr9:140137556 nonsynonymous SNV 0.981 0 21 hPsi_associated_SNPs_104288 0 0 0 0 0 Cytosol 0 0.438905228092619 0.874284744262696 0 hPsi_site_3248 iPseU_CNN:0.874284744262696;iRNA_PseU:0 3249 chr4 1244865 1244865 1 + C T SKCM 1244865 + 1244845 1244885 41 TCTTCCCCATCGTCACTCTCCATGGCCTCCGTCTACACACA TCTTCCCCATCGTCACTCTCTATGGCCTCCGTCTACACACA Direct Gain 0 0.958928000287516 0 0.999285340309143 prediction 0.917856000575032 Functional Gain - CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1244865 chr4:1244865 . . 0 21 hPsi_associated_SNPs_104289 0 0 1 0 0 unknown 0 0.438572503646428 0.998570680618286 0 hPsi_site_3249 iPseU_CNN:0.998570680618286;iRNA_PseU:0 3250 chr19 57038224 57038224 1 + C T rs548755220 57038224 + 57038204 57038244 41 AAAAGTGCAGATAAAACCCTCATCTCCCTGGGACAAAGCAC AAAAGTGCAGATAAAACCCTTATCTCCCTGGGACAAAGCAC Direct Gain 0 0.958922815729484 0 0.942337214946747 prediction 0.917845631458969 Functional Gain - ZNF471 ENSG00000196263 UTR3 Human protein_coding chr19:57038224 chr19:57038224 . . 0 21 hPsi_associated_SNPs_104290 0 0 0 0 0 exosome 0 0.438718633359852 0.884674429893494 0 hPsi_site_3250 iPseU_CNN:0.884674429893494;iRNA_PseU:0 3251 chr7 63809001 63809001 1 + G T SARC 63809001 + 63808981 63809021 41 ACAAGAGAAATCATACTGGAGACAGACCCTACAAATGTGAA ACAAGAGAAATCATACTGGATACAGACCCTACAAATGTGAA Direct Gain 0 0.958912561233311 0 0.493190795183182 prediction 0.917825122466622 Functional Gain - ZNF736 ENSG00000234444 CDS Human protein_coding chr7:63809001 chr7:63809001 nonsynonymous SNV 0.992 2 21 hPsi_associated_SNPs_104291 0 0 0 0 0 nucleus 0 0.436385226048227 0 0 hPsi_site_3251 iPseU_CNN:0;iRNA_PseU:0 3252 chr5 154193538 154193538 1 + C T GBM 154193538 + 154193518 154193558 41 GAAGCGGTGCCCCTCCCAGTCTTCCAGCAGGCCTGCTGCCA GAAGCGGTGCCCCTCCCAGTTTTCCAGCAGGCCTGCTGCCA Direct Gain 0 0.958909883163424 0 0.94417142868042 prediction 0.917819766326848 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154193538 chr5:154193538 nonsynonymous SNV 0.975 4 21 hPsi_associated_SNPs_104292 0 0 1 0 1 Cytosol 0 0.438720068378872 0.88834285736084 0 hPsi_site_3252 iPseU_CNN:0.88834285736084;iRNA_PseU:0 3253 chr16 11445116 11445116 1 + C T rs75818242 11445116 + 11445096 11445136 41 GGAATGACATCCTGGCTCCTCATCTTCTTCATCAGCAACTA GGAATGACATCCTGGCTCCTTATCTTCTTCATCAGCAACTA Direct Gain 0 0.958899311379621 0 0.998612761497498 prediction 0.917798622759242 Functional Gain - RMI2 ENSG00000175643 UTR3 Human protein_coding chr16:11445116 chr16:11445116 . . 0 21 hPsi_associated_SNPs_104293 0 0 1 1 0 Ribosome 0 0.438717281585015 0.997225522994996 0 hPsi_site_3253 iPseU_CNN:0.997225522994996;iRNA_PseU:0 3254 chr22 38121040 38121040 1 + C T rs41296243 38121040 + 38121020 38121060 41 TCAACAGAACATCCCCAGATCATCTTCTACCCAACAAGACA TCAACAGAACATCCCCAGATTATCTTCTACCCAACAAGACA Direct Gain 0 0.958898021195796 0 0.999984085559845 prediction 0.917796042391592 Functional Gain - TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38121040 chr22:38121040 nonsynonymous SNV 0.767 1 21 hPsi_associated_SNPs_104294 0 0 1 0 0 Ribosome 0 0.438801693890284 0.99996817111969 0 hPsi_site_3254 iPseU_CNN:0.99996817111969;iRNA_PseU:0 3255 chr12 109577476 109577476 1 + G T COAD 109577476 + 109577456 109577496 41 CAAAGATGCCGGTCGGCGGAGAAACTCCCTACCACCCTCCC CAAAGATGCCGGTCGGCGGATAAACTCCCTACCACCCTCCC Direct Gain 0 0.958896527325253 0 0.997836232185364 prediction 0.917793054650505 Functional Gain - ACACB ENSG00000076555 CDS Human protein_coding chr12:109577476 chr12:109577476 nonsynonymous SNV 0.069 1 21 hPsi_associated_SNPs_104295 0 0 0 0 0 Nucleus 0 0.438727084746886 0.995672464370728 0 hPsi_site_3255 iPseU_CNN:0.995672464370728;iRNA_PseU:0 3256 chr15 22369113 22369113 1 + G T LUSC 22369113 + 22369093 22369133 41 AGTTAGACAGTTACTTCTGTGACATCACACAGGTTGTCCGG AGTTAGACAGTTACTTCTGTTACATCACACAGGTTGTCCGG Direct Gain 0 0.958887199179453 0 0.988456249237061 prediction 0.917774398358905 Functional Gain - OR4M2 ENSG00000182974 CDS Human protein_coding chr15:22369113 chr15:22369113 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_104296 0 0 0 0 0 unknown 0 0.438717685976077 0.976912498474122 0 hPsi_site_3256 iPseU_CNN:0.976912498474122;iRNA_PseU:0 3257 chr4 3133387 3133387 1 + G A COAD 3133387 - 3133367 3133407 41 AGGGCCTTCACGCTGACCCTCACATCCCTGTCCGGAACCAG AGGGCCTTCACGCTGACCCTTACATCCCTGTCCGGAACCAG Direct Gain 0 0.958880215321315 0 0.999998569488525 prediction 0.91776043064263 Functional Gain - HTT ENSG00000197386 CDS Human protein_coding chr4:3133387 chr4:3133387 synonymous SNV . 0 21 hPsi_associated_SNPs_104297 0 0 0 0 0 Cytosol 0 0.438718592997467 0.99999713897705 0 hPsi_site_3257 iPseU_CNN:0.99999713897705;iRNA_PseU:0 3258 chr11 118373886 118373886 1 + G T UCEC 118373886 + 118373866 118373906 41 ATATGGGATCTAGTTCCAGAGATAGGAGACAGAAAGGGAAA ATATGGGATCTAGTTCCAGATATAGGAGACAGAAAGGGAAA Direct Gain 0 0.958866136759617 0 0.998136401176453 prediction 0.917732273519235 Functional Gain - KMT2A ENSG00000118058 CDS Human protein_coding chr11:118373886 chr11:118373886 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104298 0 0 1 0 0 Cytosol 0 0.441528575428307 0.996272802352906 0 hPsi_site_3258 iPseU_CNN:0.996272802352906;iRNA_PseU:0 3259 chr6 160510272 160510272 1 + G T UCEC 160510272 + 160510252 160510292 41 GCAAGAGCTTCAGCCTCGGAGATATTTATTTTAAGTAAGTA GCAAGAGCTTCAGCCTCGGATATATTTATTTTAAGTAAGTA Direct Gain 0 0.958860944106298 0 0.932050824165344 prediction 0.917721888212596 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160510272 chr6:160510272 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_104299 0 0 1 0 1 Endoplasmic reticulum 0 0.438690553416926 0.864101648330688 0 hPsi_site_3259 iPseU_CNN:0.864101648330688;iRNA_PseU:0 3260 chr18 51013219 51013219 1 + A T COAD 51013219 + 51013199 51013239 41 GAAAGTGCCCAGTACCCAGGAATCCTCCCGTCTCCCACCTG GAAAGTGCCCAGTACCCAGGTATCCTCCCGTCTCCCACCTG Direct Gain 0 0.958858845222656 0 0.999877572059631 prediction 0.917717690445313 Functional Gain - DCC ENSG00000187323 CDS Human protein_coding chr18:51013219 chr18:51013219 synonymous SNV . 0 21 hPsi_associated_SNPs_104300 0 0 0 0 1 exosome 0 0.438718593008747 0.999755144119262 0 hPsi_site_3260 iPseU_CNN:0.999755144119262;iRNA_PseU:0 3261 chr5 169508967 169508967 1 + C A LUAD 169508967 - 169508947 169508987 41 ATTGTCTTGAAGAACTGATTGACCTTCTTCCGTGTGAGTGT ATTGTCTTGAAGAACTGATTTACCTTCTTCCGTGTGAGTGT Direct Gain 0 0.958857357890379 0 0.975446224212646 prediction 0.917714715780757 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169508967 chr5:169508967 synonymous SNV . 0 21 hPsi_associated_SNPs_104301 0 0 0 0 0 Cytosol 0 0.43895532251958 0.950892448425292 0 hPsi_site_3261 iPseU_CNN:0.950892448425292;iRNA_PseU:0 3262 chr22 42154486 42154486 1 + G T SARC 42154486 + 42154466 42154506 41 GGAGGGAGCTGCTCGCCAGAGACAGTACTGCATCCTGCTCC GGAGGGAGCTGCTCGCCAGATACAGTACTGCATCCTGCTCC Direct Gain 0 0.958855418561572 0 0.999137103557587 prediction 0.917710837123145 Functional Gain - MEI1 ENSG00000167077 CDS Human protein_coding chr22:42154486 chr22:42154486 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_104302 0 0 0 0 2 exosome 0 0.438707232725958 0.998274207115174 0 hPsi_site_3262 iPseU_CNN:0.998274207115174;iRNA_PseU:0 3263 chr14 71493521 71493521 1 + A T LUSC 71493521 + 71493501 71493541 41 GTTTCCCAATAGTGTTTTTCATTGGTCTCCTGCCTCAGGTG GTTTCCCAATAGTGTTTTTCTTTGGTCTCCTGCCTCAGGTG Direct Gain 0 0.958843534153829 0 0.397630423307419 prediction 0.917687068307657 Functional Gain - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71493521 chr14:71493521 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104303 0 0 1 0 1 Endoplasmic reticulum 0 0.438718592995245 0 0 hPsi_site_3263 iPseU_CNN:0;iRNA_PseU:0 3264 chr11 17793919 17793919 1 + C T LUAD 17793919 + 17793899 17793939 41 TGTGCGCTGGCGGGCGTGCTCACCATCGCCATGCCCGTGCC TGTGCGCTGGCGGGCGTGCTTACCATCGCCATGCCCGTGCC Direct Gain 0 0.958840950268927 0 0.993971526622772 prediction 0.917681900537855 Functional Gain - KCNC1 ENSG00000129159 CDS Human protein_coding chr11:17793919 chr11:17793919 synonymous SNV . 0 21 hPsi_associated_SNPs_104304 0 0 0 0 0 exosome 0 0.43609487849156 0.987943053245544 0 hPsi_site_3264 iPseU_CNN:0.987943053245544;iRNA_PseU:0 3265 chr20 44676132 44676132 1 + C T SKCM 44676132 + 44676112 44676152 41 ATGAGCCTCTGCCTGGCCCTCATGTTCATCTGCTCCTGGTA ATGAGCCTCTGCCTGGCCCTTATGTTCATCTGCTCCTGGTA Direct Gain 0 0.95883720609696 0 0.999676465988159 prediction 0.917674412193921 Functional Gain - SLC12A5 ENSG00000124140 CDS Human protein_coding chr20:44676132 chr20:44676132 synonymous SNV . 0 21 hPsi_associated_SNPs_104305 0 0 0 0 2 cytosol 0 0.438743688727138 0.999352931976318 0 hPsi_site_3265 iPseU_CNN:0.999352931976318;iRNA_PseU:0 3266 chr12 53400191 53400191 1 + C T rs554266041 53400191 + 53400171 53400211 41 GCCCCCTCCCAGCTTCGCGTCTCCTAGCTCGACGCGCCCGC GCCCCCTCCCAGCTTCGCGTTTCCTAGCTCGACGCGCCCGC Direct Gain 0 0.95883124623241 0 0.999922513961792 prediction 0.91766249246482 Functional Gain - EIF4B ENSG00000063046 UTR5 Human protein_coding chr12:53400191 chr12:53400191 . . 0 21 hPsi_associated_SNPs_104306 0 0 0 0 1 Cytosol 0 0.438805727406848 0.999845027923584 0 hPsi_site_3266 iPseU_CNN:0.999845027923584;iRNA_PseU:0 3267 chr1 44083552 44083552 1 + C T KIRP 44083552 + 44083532 44083572 41 CAGCGCACGGCCACTGTGGTCATGATGACACGGCTGGAGGA CAGCGCACGGCCACTGTGGTTATGATGACACGGCTGGAGGA Direct Gain 0 0.958830044495787 0 0.998324155807495 prediction 0.917660088991575 Functional Gain - PTPRF ENSG00000142949 CDS Human protein_coding chr1:44083552 chr1:44083552 synonymous SNV . 0 21 hPsi_associated_SNPs_104307 0 0 1 0 1 Ribosome 0 0.438797490823201 0.99664831161499 0 hPsi_site_3267 iPseU_CNN:0.99664831161499;iRNA_PseU:0 3268 chr19 55048217 55048217 1 + C T rs377354275 55048217 + 55048197 55048237 41 TGTTCAGACACGGGGTTGCTCATGGACAGTGGCTCAGTGGA TGTTCAGACACGGGGTTGCTTATGGACAGTGGCTCAGTGGA Direct Gain 0 0.958826528370941 0 0.017407238483429 prediction 0.917653056741881 Functional Gain - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55048217 chr19:55048217 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104308 0 0 0 0 0 Nucleus 0 0.438564148031707 0 0 hPsi_site_3268 iPseU_CNN:0;iRNA_PseU:0 3269 chr3 71341768 71341768 1 + G A rs569676128 71341768 - 71341748 71341788 41 TTAGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGCACT TTAGGCCGGGCATGGTGGCTTACACCTGTAATCCCAGCACT Direct Gain 0 0.958824217558449 0 0.997534871101379 prediction 0.917648435116897 Functional Gain - FOXP1-AS1 ENSG00000244203 ncRNA_exonic Human antisense chr3:71341768 chr3:71341768 . . 0 21 hPsi_associated_SNPs_104309 0 0 0 0 0 unknown 0 0.4385447787621 0.995069742202758 0 hPsi_site_3269 iPseU_CNN:0.995069742202758;iRNA_PseU:0 3270 chr5 139508127 139508127 1 + C T HNSC 139508127 + 139508107 139508147 41 AATATTACCATATTTGCTGTCATGTTCTCCCATCTCAGTGC AATATTACCATATTTGCTGTTATGTTCTCCCATCTCAGTGC Direct Gain 0 0.958817034680237 0 0.954541325569153 prediction 0.917634069360474 Functional Gain - IGIP ENSG00000182700 CDS Human protein_coding chr5:139508127 chr5:139508127 synonymous SNV . 0 21 hPsi_associated_SNPs_104310 0 0 0 0 0 Nucleus 0 0.438718744845887 0.909082651138306 0 hPsi_site_3270 iPseU_CNN:0.909082651138306;iRNA_PseU:0 3271 chr6 26452153 26452153 1 + C T STAD 26452153 + 26452133 26452173 41 GAGAGGAAAAAAGGTTGGGTCAAAATGACACCGGAGAACGG GAGAGGAAAAAAGGTTGGGTTAAAATGACACCGGAGAACGG Direct Gain 0 0.958795023564685 0 0.992565393447876 prediction 0.917590047129371 Functional Gain - BTN3A3 ENSG00000111801 CDS Human protein_coding chr6:26452153 chr6:26452153 synonymous SNV . 0 21 hPsi_associated_SNPs_104311 0 0 0 0 0 Endoplasmic reticulum 0 0.438713867798772 0.985130786895752 0 hPsi_site_3271 iPseU_CNN:0.985130786895752;iRNA_PseU:0 3272 chr8 36793376 36793376 1 + G A BLCA 36793376 - 36793356 36793396 41 CTCATCTGAAGTTTTCCTTTCATTTTCTTTTGCATTGTCAC CTCATCTGAAGTTTTCCTTTTATTTTCTTTTGCATTGTCAC Direct Gain 0 0.958791653866496 0 0.0028553307056427 prediction 0.917583307732992 Functional Gain - KCNU1 ENSG00000215262 CDS Human protein_coding chr8:36793376 chr8:36793376 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_104312 0 0 0 0 0 unknown 0 0.439405850708112 0 0 hPsi_site_3272 iPseU_CNN:0;iRNA_PseU:0 3273 chr1 32678175 32678175 1 + G A STAD 32678175 - 32678155 32678195 41 AGATAGGGAAGGTCCTTGAACTCATCCTCTCCGACAGCCAC AGATAGGGAAGGTCCTTGAATTCATCCTCTCCGACAGCCAC Direct Gain 0 0.958774233640053 0 0.981410205364227 prediction 0.917548467280107 Functional Gain - DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32678175 chr1:32678175 synonymous SNV . 0 21 hPsi_associated_SNPs_104313 0 0 0 0 0 cytosol 0 0.438717734813694 0.962820410728454 0 hPsi_site_3273 iPseU_CNN:0.962820410728454;iRNA_PseU:0 3274 chr9 37731005 37731005 1 + G A SKCM 37731005 - 37730985 37731025 41 CCTGAAGAGGCAGCGGTAGTCATGTGACTCCTCCCTTTCTA CCTGAAGAGGCAGCGGTAGTTATGTGACTCCTCCCTTTCTA Direct Gain 0 0.958768500917634 0 1 prediction 0.917537001835267 Functional Gain - FRMPD1 ENSG00000070601 CDS Human protein_coding chr9:37731005 chr9:37731005 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_104314 0 0 0 0 0 exosome 0 0.438718661578194 1 0 hPsi_site_3274 iPseU_CNN:1;iRNA_PseU:0 3275 chrX 48925163 48925163 1 + G T BLCA 48925163 + 48925143 48925183 41 GGGAGCTGCCGCCTGCAGCTGAGGTCCCAGGACCCCTCTCC GGGAGCTGCCGCCTGCAGCTTAGGTCCCAGGACCCCTCTCC Direct Gain 0 0.958765402958899 0 0.79721200466156 prediction 0.917530805917799 Functional Gain - CCDC120 ENSG00000147144 CDS Human protein_coding chrX:48925163 chrX:48925163 stopgain 0.964 1 21 hPsi_associated_SNPs_104315 0 0 0 0 0 cytosol 0 0.438711733861468 0.59442400932312 0 hPsi_site_3275 iPseU_CNN:0.59442400932312;iRNA_PseU:0 3276 chr3 127395140 127395140 1 + G A CESC 127395140 - 127395120 127395160 41 GTGTACTACAAAGACCACGTCACTGTGGATGCCCTGCTCTA GTGTACTACAAAGACCACGTTACTGTGGATGCCCTGCTCTA Direct Gain 0 0.958764489155325 0 0.999109506607056 prediction 0.91752897831065 Functional Gain - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127395140 chr3:127395140 nonsynonymous SNV 0.380 5 21 hPsi_associated_SNPs_104316 0 0 0 0 0 exosome 0 0.438762251164999 0.998219013214112 0 hPsi_site_3276 iPseU_CNN:0.998219013214112;iRNA_PseU:0 3277 chr7 100350251 100350251 1 + A T UCEC 100350251 + 100350231 100350271 41 GAGACTACCATCTCTACAGAAAAACTCACCATCCCCATGGA GAGACTACCATCTCTACAGATAAACTCACCATCCCCATGGA Direct Gain 0 0.9587568253954 0 0.980103313922882 prediction 0.9175136507908 Functional Gain - ZAN ENSG00000146839 CDS Human protein_coding chr7:100350251 chr7:100350251 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_104317 0 0 0 0 0 cytosol 0 0.438782995392019 0.960206627845764 0 hPsi_site_3277 iPseU_CNN:0.960206627845764;iRNA_PseU:0 3278 chr12 109490401 109490401 1 + C T rs2304266 109490401 + 109490381 109490421 41 GCGGCCGCAGGTTCCGCTGTCTCGGGAACCGTCGTATCCCT GCGGCCGCAGGTTCCGCTGTTTCGGGAACCGTCGTATCCCT Direct Gain 0 0.958750737193821 0 0.99931389093399 prediction 0.917501474387641 Functional Gain - USP30-AS1 ENSG00000256262 ncRNA_exonic Human antisense chr12:109490401 chr12:109490401 . . 0 21 hPsi_associated_SNPs_104318 0 0 0 0 0 unknown 0 0.438696178972467 0.99862778186798 0 hPsi_site_3278 iPseU_CNN:0.99862778186798;iRNA_PseU:0 3279 chr10 72520228 72520228 1 + C T UCEC 72520228 + 72520208 72520248 41 GTGTCCTGCATCAAGAAGGCCTCGGGCCCCAACCCTGGCCC GTGTCCTGCATCAAGAAGGCTTCGGGCCCCAACCCTGGCCC Direct Gain 0 0.958749000593205 0 0.97156834602356 prediction 0.917498001186409 Functional Gain - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72520228 chr10:72520228 synonymous SNV . 0 21 hPsi_associated_SNPs_104319 0 0 1 0 0 chromatin 0 0.438726709536347 0.94313669204712 0 hPsi_site_3279 iPseU_CNN:0.94313669204712;iRNA_PseU:0 3280 chr1 158064850 158064850 1 + C T UCEC 158064850 + 158064830 158064870 41 ACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGGACTA ACAGCCACTCGATTCTCCTATACCTCCCAGCACTCGGACTA Direct Gain 0 0.958741255830777 0 0.999585568904877 prediction 0.917482511661553 Functional Gain - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158064850 chr1:158064850 synonymous SNV . 0 21 hPsi_associated_SNPs_104320 0 0 1 0 0 cytosol 0 0.438800186352157 0.999171137809754 0 hPsi_site_3280 iPseU_CNN:0.999171137809754;iRNA_PseU:0 3281 chr15 43817874 43817874 1 + G A CESC 43817874 - 43817854 43817894 41 AAAGCCTTATCCTGCTGTTTCACAGCCTCATTCTTTACATG AAAGCCTTATCCTGCTGTTTTACAGCCTCATTCTTTACATG Direct Gain 0 0.958731895233862 0 0.978465139865875 prediction 0.917463790467724 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43817874 chr15:43817874 synonymous SNV . 0 21 hPsi_associated_SNPs_104321 0 0 0 0 0 nucleolus 0 0.438718597881225 0.95693027973175 0 hPsi_site_3281 iPseU_CNN:0.95693027973175;iRNA_PseU:0 3282 chr6 4937844 4937844 1 + G A BLCA 4937844 - 4937824 4937864 41 GAGCAGTACCAGCTTGCTGTCATCGGCAGCGGCCGTGCTCA GAGCAGTACCAGCTTGCTGTTATCGGCAGCGGCCGTGCTCA Direct Gain 0 0.95872822511014 0 0.991873145103455 prediction 0.91745645022028 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4937844 chr6:4937844 nonsynonymous SNV 0.875 1 21 hPsi_associated_SNPs_104322 0 0 0 0 0 Cytoplasm 0 0.438721294061679 0.98374629020691 0 hPsi_site_3282 iPseU_CNN:0.98374629020691;iRNA_PseU:0 3283 chr19 19165128 19165128 1 + C T HNSC 19165128 + 19165108 19165148 41 TGAGGGACCAGAGCGGCGTTCAGGTATGAAGTCCCCCTGGC TGAGGGACCAGAGCGGCGTTTAGGTATGAAGTCCCCCTGGC Direct Gain 0 0.958727681845033 0 0.924437761306763 prediction 0.917455363690067 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19165128 chr19:19165128 stopgain 0.000 0 21 hPsi_associated_SNPs_104323 0 0 1 0 1 Ribosome 0 0.438718593456589 0.848875522613526 0 hPsi_site_3283 iPseU_CNN:0.848875522613526;iRNA_PseU:0 3284 chr11 57313375 57313375 1 + G A UCEC 57313375 - 57313355 57313395 41 GACTCAGGGGGACTCTGGGGCACGTCGCTGGGTGAAGACTC GACTCAGGGGGACTCTGGGGTACGTCGCTGGGTGAAGACTC Direct Gain 0 0.958718522436492 0 0.999999761581421 prediction 0.917437044872984 Functional Gain - SMTNL1 ENSG00000214872 CDS Human protein_coding chr11:57313375 chr11:57313375 synonymous SNV . 0 21 hPsi_associated_SNPs_104324 0 0 0 0 0 exosome 0 0.438601197045645 0.999999523162842 0 hPsi_site_3284 iPseU_CNN:0.999999523162842;iRNA_PseU:0 3285 chr2 71795404 71795404 1 + G T STAD 71795404 + 71795384 71795424 41 GCAAGATCAAGCTACCCAAGGACAGCTTCCGCCCCTCGGCC GCAAGATCAAGCTACCCAAGTACAGCTTCCGCCCCTCGGCC Direct Gain 0 0.958717290923989 0 0.999997496604919 prediction 0.917434581847977 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71795404 chr2:71795404 nonsynonymous SNV 0.983 5 21 hPsi_associated_SNPs_104325 0 0 0 0 1 Nucleus 0 0.438718592923424 0.999994993209838 0 hPsi_site_3285 iPseU_CNN:0.999994993209838;iRNA_PseU:0 3286 chr8 27358515 27358515 1 + C A BLCA 27358515 - 27358495 27358535 41 CCCCTCACCTGGGAAAGTGTGATCTCTCCTTTCATAAGCCG CCCCTCACCTGGGAAAGTGTTATCTCTCCTTTCATAAGCCG Direct Gain 0 0.958715622932998 0 0.451349020004272 prediction 0.917431245865997 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27358515 chr8:27358515 synonymous SNV . 0 21 hPsi_associated_SNPs_104326 0 0 0 0 0 Cytosol 0 0.438718469591553 0 0 hPsi_site_3286 iPseU_CNN:0;iRNA_PseU:0 3287 chr12 69651668 69651668 1 + C T SKCM 69651668 + 69651648 69651688 41 GCCAGCAGGACCAGGAGGGCCACCCCCACCTTTTCCAGGTA GCCAGCAGGACCAGGAGGGCTACCCCCACCTTTTCCAGGTA Direct Gain 0 0.958713191298534 0 0.962291538715363 prediction 0.917426382597069 Functional Gain - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69651668 chr12:69651668 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104327 0 0 1 0 1 Nucleus 0 0.439592498797386 0.924583077430726 0 hPsi_site_3287 iPseU_CNN:0.924583077430726;iRNA_PseU:0 3288 chr1 155911816 155911816 1 + C A STAD 155911816 - 155911796 155911836 41 GGCACCTCCGAAGGGCCAGTGAAAGTCCAGTGCCGACTCGG GGCACCTCCGAAGGGCCAGTTAAAGTCCAGTGCCGACTCGG Direct Gain 0 0.958708954991287 0 0.999996960163116 prediction 0.917417909982575 Functional Gain - RXFP4 ENSG00000173080 CDS Human protein_coding chr1:155911816 chr1:155911816 nonsynonymous SNV 0.848 0 21 hPsi_associated_SNPs_104328 0 0 0 0 0 exosome 0 0.438718595314596 0.999993920326232 0 hPsi_site_3288 iPseU_CNN:0.999993920326232;iRNA_PseU:0 3289 chr4 126239844 126239844 1 + C A LIHC 126239844 - 126239824 126239864 41 AGTAGCTACTATTTGCAACTGATAAGCTGTTTTTTCTTCTC AGTAGCTACTATTTGCAACTTATAAGCTGTTTTTTCTTCTC Direct Gain 0 0.958704616374492 0 0.0137515366077423 prediction 0.917409232748984 Functional Gain - FAT4 ENSG00000196159 CDS Human protein_coding chr4:126239844 chr4:126239844 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_104329 0 0 0 0 0 Endoplasmic reticulum 0 0.438751688152972 0 0 hPsi_site_3289 iPseU_CNN:0;iRNA_PseU:0 3290 chr12 129100730 129100730 1 + G A SARC 129100730 - 129100710 129100750 41 AAACTGGCTATTTCAAAGTTCATCTGCACAACCTCATTGAA AAACTGGCTATTTCAAAGTTTATCTGCACAACCTCATTGAA Direct Gain 0 0.958702892103723 0 0.999866664409637 prediction 0.917405784207447 Functional Gain - TMEM132C ENSG00000181234 CDS Human protein_coding chr12:129100730 chr12:129100730 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_104330 0 0 0 0 0 exosome 0 0.438686738347394 0.999733328819274 0 hPsi_site_3290 iPseU_CNN:0.999733328819274;iRNA_PseU:0 3291 chr10 70405425 70405425 1 + C T CESC 70405425 + 70405405 70405445 41 AACTACTACCCTTTCCAACTCACATATCAACTCAGCTACTA AACTACTACCCTTTCCAACTTACATATCAACTCAGCTACTA Direct Gain 0 0.958700320389986 0 0.434065401554108 prediction 0.917400640779971 Functional Gain - TET1 ENSG00000138336 CDS Human protein_coding chr10:70405425 chr10:70405425 nonsynonymous SNV 0.030 0 21 hPsi_associated_SNPs_104331 0 0 1 0 0 chromatin 0 0.438718919272291 0 0 hPsi_site_3291 iPseU_CNN:0;iRNA_PseU:0 3292 chr21 42613763 42613763 1 + G A OV 42613763 - 42613743 42613783 41 ACCAGGGAGTCGAAGAAGGTCTCCAGAGAACTTGATGGCTG ACCAGGGAGTCGAAGAAGGTTTCCAGAGAACTTGATGGCTG Direct Gain 0 0.958699613836831 0 0.998345255851746 prediction 0.917399227673661 Functional Gain - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42613763 chr21:42613763 synonymous SNV . 0 21 hPsi_associated_SNPs_104332 0 0 0 0 0 Ribosome 0 0.438108232627026 0.996690511703492 0 hPsi_site_3292 iPseU_CNN:0.996690511703492;iRNA_PseU:0 3293 chr1 171753269 171753269 1 + G A rs139771818 171753269 - 171753249 171753289 41 TTGGCCACTTGGTGCACCCTCACCATCCACCCCTCCCGGGA TTGGCCACTTGGTGCACCCTTACCATCCACCCCTCCCGGGA Direct Gain 0 0.958691685414204 0 0.999962449073792 prediction 0.917383370828407 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753269 chr1:171753269 synonymous SNV . 0 21 hPsi_associated_SNPs_104333 0 0 0 0 0 Ribosome 0 0.438718622156622 0.999924898147584 0 hPsi_site_3293 iPseU_CNN:0.999924898147584;iRNA_PseU:0 3294 chr7 150761384 150761384 1 + G T UCEC 150761384 + 150761364 150761404 41 GGCGTGGAGCGGTTTGAGGAGATCCTACAGGAGGCCGGGTC GGCGTGGAGCGGTTTGAGGATATCCTACAGGAGGCCGGGTC Direct Gain 0 0.958682813877971 0 0.994796395301819 prediction 0.917365627755941 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761384 chr7:150761384 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_104334 0 0 1 0 1 Ribosome 0 0.43873424162013 0.989592790603638 0 hPsi_site_3294 iPseU_CNN:0.989592790603638;iRNA_PseU:0 3295 chr7 31618007 31618007 1 + C T LGG 31618007 + 31617987 31618027 41 ACAAGCTCAAGAGCTTGTCTCATCTTGCAGGCAAAGGACCA ACAAGCTCAAGAGCTTGTCTTATCTTGCAGGCAAAGGACCA Direct Gain 0 0.958679819194563 0 0.984065592288971 prediction 0.917359638389126 Functional Gain - CCDC129 ENSG00000180347 CDS Human protein_coding chr7:31618007 chr7:31618007 nonsynonymous SNV 0.009 1 21 hPsi_associated_SNPs_104335 0 0 0 0 1 exosome 0 0.439048174148979 0.968131184577942 0 hPsi_site_3295 iPseU_CNN:0.968131184577942;iRNA_PseU:0 3296 chr17 12812228 12812228 1 + G A UCEC 12812228 - 12812208 12812248 41 AGACACTGAGCCAGTGTTGTCAAAGGCAACTTTTTCTGAAA AGACACTGAGCCAGTGTTGTTAAAGGCAACTTTTTCTGAAA Direct Gain 0 0.958670856367533 0 0.9879310131073 prediction 0.917341712735067 Functional Gain - ARHGAP44 ENSG00000006740 CDS Human protein_coding chr17:12812228 chr17:12812228 synonymous SNV . 0 21 hPsi_associated_SNPs_104336 0 0 0 0 0 Nucleus 0 0.438666479036939 0.9758620262146 0 hPsi_site_3296 iPseU_CNN:0.9758620262146;iRNA_PseU:0 3297 chr2 48602364 48602364 1 + G A BLCA 48602364 - 48602344 48602384 41 GCCACTGTCTCCAAGAGGATCATCTTCATAATCAACGTCTG GCCACTGTCTCCAAGAGGATTATCTTCATAATCAACGTCTG Direct Gain 0 0.958668351602513 0 0.844955444335938 prediction 0.917336703205026 Functional Gain - FOXN2 ENSG00000170802 CDS Human protein_coding chr2:48602364 chr2:48602364 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_104337 0 0 0 0 0 Cytosol 0 0.43871859618029 0.689910888671876 0 hPsi_site_3297 iPseU_CNN:0.689910888671876;iRNA_PseU:0 3298 chr2 233245165 233245165 1 + G A LUSC 233245165 - 233245145 233245185 41 GACGGGTCCAGGGAAGCCTGCATGAGCTCAGTGCGGTTCCA GACGGGTCCAGGGAAGCCTGTATGAGCTCAGTGCGGTTCCA Direct Gain 0 0.958665977271391 0 0.999801158905029 prediction 0.917331954542782 Functional Gain - ALPP ENSG00000163283 CDS Human protein_coding chr2:233245165 chr2:233245165 nonsynonymous SNV 0.580 1 21 hPsi_associated_SNPs_104338 0 0 0 0 0 Endoplasmic reticulum 0 0.438091381209413 0.999602317810058 0 hPsi_site_3298 iPseU_CNN:0.999602317810058;iRNA_PseU:0 3299 chr2 98340508 98340508 1 + C A LIHC 98340508 - 98340488 98340528 41 AAGGGCAGGTGCGCCGCGGGGTCTGGCATCGCCCCTGGGCC AAGGGCAGGTGCGCCGCGGGTTCTGGCATCGCCCCTGGGCC Direct Gain 0 0.958659394195851 0 0.698198437690735 prediction 0.917318788391703 Functional Gain - ZAP70 ENSG00000115085 CDS Human protein_coding chr2:98340508 chr2:98340508 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_104339 0 0 0 0 0 exosome 0 0.438257230450512 0.39639687538147 0 hPsi_site_3299 iPseU_CNN:0.39639687538147;iRNA_PseU:0 3300 chr5 60839891 60839891 1 + C T COAD 60839891 + 60839871 60839911 41 GAACTCTGGTAAGCTCATGTCACTGGACAAAGCCCCCTTGA GAACTCTGGTAAGCTCATGTTACTGGACAAAGCCCCCTTGA Direct Gain 0 0.958643202887547 0 0.999998033046722 prediction 0.917286405775094 Functional Gain - ZSWIM6 ENSG00000130449 CDS Human protein_coding chr5:60839891 chr5:60839891 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104340 0 0 1 0 0 chromatin 0 0.438728032082044 0.999996066093444 0 hPsi_site_3300 iPseU_CNN:0.999996066093444;iRNA_PseU:0 3301 chr11 44069589 44069589 1 + G A rs3094398 44069589 - 44069569 44069609 41 AGGGTGTCTGACCGATGACTCATACTCCGGGTATCTTTACT AGGGTGTCTGACCGATGACTTATACTCCGGGTATCTTTACT Direct Gain 0 0.958641165505394 0 0.99994021654129 prediction 0.917282331010789 Functional Gain - ACCSL ENSG00000205126 CDS Human protein_coding chr11:44069589 chr11:44069589 nonsynonymous SNV 0.023 0 21 hPsi_associated_SNPs_104341 0 0 0 0 0 Exosome 0 0.438705312848532 0.99988043308258 0 hPsi_site_3301 iPseU_CNN:0.99988043308258;iRNA_PseU:0 3302 chr3 51418783 51418783 1 + C T BLCA 51418783 + 51418763 51418803 41 CACTCAGCCCCAGGGTGCGTCATCCCTCAGGACCCCATGGA CACTCAGCCCCAGGGTGCGTTATCCCTCAGGACCCCATGGA Direct Gain 0 0.958627758725777 0 0.999812483787537 prediction 0.917255517451555 Functional Gain - DOCK3 ENSG00000088538 CDS Human protein_coding chr3:51418783 chr3:51418783 synonymous SNV . 0 21 hPsi_associated_SNPs_104342 0 0 0 0 0 Cytosol 0 0.438452153120092 0.999624967575074 0 hPsi_site_3302 iPseU_CNN:0.999624967575074;iRNA_PseU:0 3303 chr19 53762489 53762489 1 + C T LUAD 53762489 + 53762469 53762509 41 AGCAGCTCCATCGTTTTGGTCTTGTACAGGCACAAACAGCA AGCAGCTCCATCGTTTTGGTTTTGTACAGGCACAAACAGCA Direct Gain 0 0.958626782439717 0 0.999784886837006 prediction 0.917253564879434 Functional Gain - VN1R2 ENSG00000196131 CDS Human protein_coding chr19:53762489 chr19:53762489 synonymous SNV . 0 21 hPsi_associated_SNPs_104343 0 0 0 0 0 unknown 0 0.438695712651179 0.999569773674012 0 hPsi_site_3303 iPseU_CNN:0.999569773674012;iRNA_PseU:0 3304 chr17 73585556 73585556 1 + G T rs542511889 73585556 + 73585536 73585576 41 CGAGGGGCGGGGTCACGAGAGAGGTGACGAGGGCCGGGACC CGAGGGGCGGGGTCACGAGATAGGTGACGAGGGCCGGGACC Direct Gain 0 0.958625495809832 0 0.99997353553772 prediction 0.917250991619663 Functional Gain - MYO15B ENSG00000073350;ENSG00000266714 intergenic Human other chr17:73585556 chr17:73585556 . . 0 21 hPsi_associated_SNPs_104344 0 0 1 0 0 nucleolus 0 0.438720340030207 0.99994707107544 0 hPsi_site_3304 iPseU_CNN:0.99994707107544;iRNA_PseU:0 3305 chr22 50279381 50279381 1 + C A OV 50279381 - 50279361 50279401 41 AGGGGCGGGGAGGGAGTACTGAGGTTTCAAGTATTCAAGCA AGGGGCGGGGAGGGAGTACTTAGGTTTCAAGTATTCAAGCA Direct Gain 0 0.95861717960293 0 0.999971568584442 prediction 0.917234359205861 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279381 chr22:50279381 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104345 0 0 0 0 0 chromatin 0 0.438718598440722 0.999943137168884 0 hPsi_site_3305 iPseU_CNN:0.999943137168884;iRNA_PseU:0 3306 chr2 206590801 206590801 1 + C A COAD 206590801 - 206590781 206590821 41 TATCTGCACAAGTACCTGGAGATACTCCTTGTTGGAATCCA TATCTGCACAAGTACCTGGATATACTCCTTGTTGGAATCCA Direct Gain 0 0.9586108970445 0 0.9980309009552 prediction 0.917221794088999 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206590801 chr2:206590801 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_104346 0 0 0 0 0 Nucleus 0 0.438718896585579 0.9960618019104 0 hPsi_site_3306 iPseU_CNN:0.9960618019104;iRNA_PseU:0 3307 chr17 79667814 79667814 1 + C A UCEC 79667814 - 79667794 79667834 41 TAAGGCTGGTAGCCCATGGAGACTGACTGGCTCCCCATGTA TAAGGCTGGTAGCCCATGGATACTGACTGGCTCCCCATGTA Direct Gain 0 0.958610462629466 0 0.999998033046722 prediction 0.917220925258931 Functional Gain - HGS ENSG00000185359 CDS Human protein_coding chr17:79667814 chr17:79667814 synonymous SNV . 0 21 hPsi_associated_SNPs_104347 0 0 1 0 0 Nucleus 0 0.434923007076024 0.999996066093444 0 hPsi_site_3307 iPseU_CNN:0.999996066093444;iRNA_PseU:0 3308 chr15 42115228 42115228 1 + G A LIHC 42115228 - 42115208 42115248 41 GGGTGCTCCAGGGGGATTGGCACCATTGCCTCTCGGCTGCT GGGTGCTCCAGGGGGATTGGTACCATTGCCTCTCGGCTGCT Direct Gain 0 0.958610271511947 0 0.996658265590668 prediction 0.917220543023894 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42115228 chr15:42115228 nonsynonymous SNV 0.751 0 21 hPsi_associated_SNPs_104348 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593823522 0.993316531181336 0 hPsi_site_3308 iPseU_CNN:0.993316531181336;iRNA_PseU:0 3309 chrX 70389735 70389735 1 + C A rs766078372 70389735 - 70389715 70389755 41 GCGCAGCGTGTCATGGGGGGGACCGGCCTCACACTCGTGGT GCGCAGCGTGTCATGGGGGGTACCGGCCTCACACTCGTGGT Direct Gain 0 0.958606354909397 0 0.999401211738586 prediction 0.917212709818794 Functional Gain - NLGN3 ENSG00000196338 CDS Human protein_coding chrX:70389735 chrX:70389735 nonsynonymous SNV 0.951 1 21 hPsi_associated_SNPs_104349 0 0 0 0 0 exosome 0 0.438718366583186 0.998802423477172 0 hPsi_site_3309 iPseU_CNN:0.998802423477172;iRNA_PseU:0 3310 chr1 120050201 120050201 1 + C T LUAD 120050201 + 120050181 120050221 41 GAGCTGAAGGAGATCAGGGTCTTGGACAAGGCCTTCGGACC GAGCTGAAGGAGATCAGGGTTTTGGACAAGGCCTTCGGACC Direct Gain 0 0.958604173599573 0 0.999990820884705 prediction 0.917208347199145 Functional Gain - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120050201 chr1:120050201 synonymous SNV . 0 21 hPsi_associated_SNPs_104350 0 0 0 0 1 exosome 0 0.438718594968138 0.99998164176941 0 hPsi_site_3310 iPseU_CNN:0.99998164176941;iRNA_PseU:0 3311 chr12 111785783 111785783 1 + G T LUSC 111785783 + 111785763 111785803 41 GGAGAGTGAGGCCGGGGAGCGACTTCACCCGGACCCTTTAA GGAGAGTGAGGCCGGGGAGCTACTTCACCCGGACCCTTTAA Direct Gain 0 0.958601522051893 0 0.999825417995453 prediction 0.917203044103786 Functional Gain - CUX2 ENSG00000111249 CDS Human protein_coding chr12:111785783 chr12:111785783 nonsynonymous SNV 0.006 1 21 hPsi_associated_SNPs_104351 0 0 0 0 0 exosome 0 0.438718592994832 0.999650835990906 0 hPsi_site_3311 iPseU_CNN:0.999650835990906;iRNA_PseU:0 3312 chr14 74036015 74036015 1 + C A UCEC 74036015 - 74035995 74036035 41 ACGCTCGAAGGACAGCAGGAGATGAGGCCATTTTGAATTCA ACGCTCGAAGGACAGCAGGATATGAGGCCATTTTGAATTCA Direct Gain 0 0.958601348188503 0 0.995790302753448 prediction 0.917202696377007 Functional Gain - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74036015 chr14:74036015 nonsynonymous SNV 0.012 1 21 hPsi_associated_SNPs_104352 0 0 0 0 0 exosome 0 0.438726344628986 0.991580605506896 0 hPsi_site_3312 iPseU_CNN:0.991580605506896;iRNA_PseU:0 3313 chr11 9598850 9598850 1 + G A rs566003740 9598850 - 9598830 9598870 41 ATAAATATTTCCTCGATGTTCATTTTCTCAAGCTCACAAGA ATAAATATTTCCTCGATGTTTATTTTCTCAAGCTCACAAGA Direct Gain 0 0.958597785355728 0 0.950827121734619 prediction 0.917195570711456 Functional Gain - WEE1 ENSG00000166483 intronic Human protein_coding chr11:9598850 chr11:9598850 . . 0 21 hPsi_associated_SNPs_104353 0 0 0 0 0 Ribosome 0 0.438616011515315 0.901654243469238 0 hPsi_site_3313 iPseU_CNN:0.901654243469238;iRNA_PseU:0 3314 chr4 41259693 41259693 1 + C T UCEC 41259693 + 41259673 41259713 41 GCTGGGGCTGGAAGAGGAGTCTCTGGGCTCGGTGCCAGCGC GCTGGGGCTGGAAGAGGAGTTTCTGGGCTCGGTGCCAGCGC Direct Gain 0 0.958596662742225 0 0.880629599094391 prediction 0.917193325484449 Functional Gain - UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41259693 chr4:41259693 nonsynonymous SNV 0.980 0 21 hPsi_associated_SNPs_104354 0 0 1 0 2 Ribosome 0 0.438916796716501 0.761259198188782 0 hPsi_site_3314 iPseU_CNN:0.761259198188782;iRNA_PseU:0 3315 chr17 72249349 72249349 1 + G A LGG 72249349 - 72249329 72249369 41 GCCGGGGGCTGCAGGCTGGTCTGACTTCCCAGGCCACTGCT GCCGGGGGCTGCAGGCTGGTTTGACTTCCCAGGCCACTGCT Direct Gain 0 0.958584649682615 0 0.999998807907104 prediction 0.917169299365229 Functional Gain - TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72249349 chr17:72249349 synonymous SNV . 0 21 hPsi_associated_SNPs_104355 0 0 0 0 0 Endoplasmic reticulum 0 0.438718867664166 0.999997615814208 0 hPsi_site_3315 iPseU_CNN:0.999997615814208;iRNA_PseU:0 3316 chr2 86438122 86438122 1 + G A rs189902070 86438122 - 86438102 86438142 41 ACATATCCTTGAAATAATGTCACATTGCTTGAGCTAACTTG ACATATCCTTGAAATAATGTTACATTGCTTGAGCTAACTTG Direct Gain 0 0.958584267001202 0 0.868826389312744 prediction 0.917168534002404 Functional Gain - MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86438122 chr2:86438122 . . 0 21 hPsi_associated_SNPs_104356 0 0 0 0 0 Ribosome 0 0.43871855282359 0.737652778625488 0 hPsi_site_3316 iPseU_CNN:0.737652778625488;iRNA_PseU:0 3317 chr2 131673168 131673168 1 + C T COAD 131673168 + 131673148 131673188 41 CTTGGAAGTGAGTGACAGTTCAGATGCCCCTGAGACCACCC CTTGGAAGTGAGTGACAGTTTAGATGCCCCTGAGACCACCC Direct Gain 0 0.95858092694017 0 0.999513328075409 prediction 0.917161853880339 Functional Gain - AMER3;ARHGEF4 ENSG00000136002 CDS Human protein_coding chr2:131673168 chr2:131673168 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_104357 0 0 0 0 0 unknown 0 0.438718175740898 0.999026656150818 0 hPsi_site_3317 iPseU_CNN:0.999026656150818;iRNA_PseU:0 3318 chr11 124440552 124440552 1 + C T LUSC 124440552 + 124440532 124440572 41 ATCAGTCACTACTTCTGTGACATCCTCCCTCTCATGAAGCT ATCAGTCACTACTTCTGTGATATCCTCCCTCTCATGAAGCT Direct Gain 0 0.95857871751331 0 0.999844431877136 prediction 0.91715743502662 Functional Gain - OR8A1 ENSG00000196119 CDS Human protein_coding chr11:124440552 chr11:124440552 synonymous SNV . 0 21 hPsi_associated_SNPs_104358 0 0 0 0 0 exosome 0 0.438717381017144 0.999688863754272 0 hPsi_site_3318 iPseU_CNN:0.999688863754272;iRNA_PseU:0 3319 chr7 70880904 70880904 1 + G A LIHC 70880904 - 70880884 70880924 41 CCCGGGGTAGCGTTTGTGGACATACTCCTCTAGGGGGACCT CCCGGGGTAGCGTTTGTGGATATACTCCTCTAGGGGGACCT Direct Gain 0 0.958572759565522 0 0.997276663780212 prediction 0.917145519131043 Functional Gain - GALNT17 ENSG00000185274 CDS Human protein_coding chr7:70880904 chr7:70880904 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104359 0 0 0 0 0 unknown 0 0.43871965192785 0.994553327560424 0 hPsi_site_3319 iPseU_CNN:0.994553327560424;iRNA_PseU:0 3320 chr1 32796502 32796502 1 + C A UCEC 32796502 - 32796482 32796522 41 CTGCAGCTATTACCATTAGGGATCTCCGTATCCAGGGCCAC CTGCAGCTATTACCATTAGGTATCTCCGTATCCAGGGCCAC Direct Gain 0 0.958567552777392 0 0.296295702457428 prediction 0.917135105554783 Functional Gain - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32796502 chr1:32796502 synonymous SNV . 0 21 hPsi_associated_SNPs_104360 0 0 0 0 0 Cytosol 0 0.438725051832904 0 0 hPsi_site_3320 iPseU_CNN:0;iRNA_PseU:0 3321 chr18 21427462 21427462 1 + G A BLCA 21427462 - 21427442 21427482 41 GGGCAGCGGCACTGCCCCGTCATCTCTTCACAAAGGCGCCG GGGCAGCGGCACTGCCCCGTTATCTCTTCACAAAGGCGCCG Direct Gain 0 0.958565431343164 0 0.999984383583069 prediction 0.917130862686327 Functional Gain - LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21427462 chr18:21427462 nonsynonymous SNV 0.591 0 21 hPsi_associated_SNPs_104361 0 0 0 0 0 Cytosol 0 0.439104300491238 0.999968767166138 0 hPsi_site_3321 iPseU_CNN:0.999968767166138;iRNA_PseU:0 3322 chr3 52526301 52526301 1 + C T BLCA 52526301 + 52526281 52526321 41 TCTTCGATGACGTGCAAGGTCATGACCTCATGGGCAGTGTC TCTTCGATGACGTGCAAGGTTATGACCTCATGGGCAGTGTC Direct Gain 0 0.958563795878994 0 0.0685325264930725 prediction 0.917127591757988 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526301 chr3:52526301 nonsynonymous SNV 0.329 1 21 hPsi_associated_SNPs_104362 0 0 0 0 0 Cytosol 0 0.43861626987884 0 0 hPsi_site_3322 iPseU_CNN:0;iRNA_PseU:0 3323 chr3 127785928 127785928 1 + C T KIRC 127785928 + 127785908 127785948 41 CTGGTGTCCAACCTTTATGTCATCTCCCAAATGCTCTCAGC CTGGTGTCCAACCTTTATGTTATCTCCCAAATGCTCTCAGC Direct Gain 0 0.958554334415834 0 0.999999165534973 prediction 0.917108668831669 Functional Gain - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127785928 chr3:127785928 synonymous SNV . 0 21 hPsi_associated_SNPs_104363 0 0 1 0 1 Ribosome 0 0.438709653827083 0.999998331069946 0 hPsi_site_3323 iPseU_CNN:0.999998331069946;iRNA_PseU:0 3324 chr11 65349200 65349200 1 + G A LUSC 65349200 - 65349180 65349220 41 GCCCAGCCTAGCTCCATGGGCTTCTGTCCCTTCCTGAGGGC GCCCAGCCTAGCTCCATGGGTTTCTGTCCCTTCCTGAGGGC Direct Gain 0 0.958551912220491 0 0.530234575271606 prediction 0.917103824440982 Functional Gain - EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65349200 chr11:65349200 nonsynonymous SNV 0.482 2 21 hPsi_associated_SNPs_104364 0 0 0 0 0 chromatin 0 0.438718592498027 0.060469150543212 0 hPsi_site_3324 iPseU_CNN:0.060469150543212;iRNA_PseU:0 3325 chr19 6750556 6750556 1 + C A OV 6750556 - 6750536 6750576 41 AACTCCGTGTAAATGGGGGTGTCCTGGCTCTCTTCTGAGGG AACTCCGTGTAAATGGGGGTTTCCTGGCTCTCTTCTGAGGG Direct Gain 0 0.958549802734264 0 0.985104560852051 prediction 0.917099605468528 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750556 chr19:6750556 nonsynonymous SNV 0.009 2 21 hPsi_associated_SNPs_104365 0 0 0 0 0 Ribosome 0 0.438718592960823 0.970209121704102 0 hPsi_site_3325 iPseU_CNN:0.970209121704102;iRNA_PseU:0 3326 chr3 140401940 140401940 1 + C T BLCA 140401940 + 140401920 140401960 41 GGCCACGACACCATTAGCCTCATCGACGCCTGCTCCGAGAG GGCCACGACACCATTAGCCTTATCGACGCCTGCTCCGAGAG Direct Gain 0 0.958548843627516 0 0.920105934143066 prediction 0.917097687255032 Functional Gain - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140401940 chr3:140401940 synonymous SNV . 0 21 hPsi_associated_SNPs_104366 0 0 0 0 1 exosome 0 0.43871136443237 0.840211868286132 0 hPsi_site_3326 iPseU_CNN:0.840211868286132;iRNA_PseU:0 3327 chr18 32455356 32455356 1 + G A COAD 32455356 - 32455336 32455376 41 ATAAAGCCACTTACTTTGTGCAAATGCCTCTTGTACATCTC ATAAAGCCACTTACTTTGTGTAAATGCCTCTTGTACATCTC Direct Gain 0 0.958542278701235 0 0.999859571456909 prediction 0.91708455740247 Functional Gain - DTNA ENSG00000134769 CDS Human protein_coding chr18:32455356 chr18:32455356 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104367 0 0 0 0 0 cytosol 0 0.438668734173976 0.999719142913818 0 hPsi_site_3327 iPseU_CNN:0.999719142913818;iRNA_PseU:0 3328 chr1 155292593 155292593 1 + C T BLCA 155292593 + 155292573 155292613 41 AAAGATCGCAGTGACTGGCTCATAGTCTTCTCGCCCGACAC AAAGATCGCAGTGACTGGCTTATAGTCTTCTCGCCCGACAC Direct Gain 0 0.958540001718981 0 0.991225004196167 prediction 0.917080003437962 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155292593 chr1:155292593 synonymous SNV . 0 21 hPsi_associated_SNPs_104368 0 0 0 0 0 Cytosol 0 0.438730252159333 0.982450008392334 0 hPsi_site_3328 iPseU_CNN:0.982450008392334;iRNA_PseU:0 3329 chr10 28824570 28824570 1 + C A BLCA 28824570 - 28824550 28824590 41 GCAACATTTTATTTGGTGGTGAAGGATCTCCGGCGTCTCGC GCAACATTTTATTTGGTGGTTAAGGATCTCCGGCGTCTCGC Direct Gain 0 0.95853822568403 0 0.817912817001343 prediction 0.91707645136806 Functional Gain - WAC ENSG00000095787 CDS Human protein_coding chr10:28824570 chr10:28824570 stopgain 1.000 1 21 hPsi_associated_SNPs_104369 0 0 0 0 0 Cytosol 0 0.438718495761615 0.635825634002686 0 hPsi_site_3329 iPseU_CNN:0.635825634002686;iRNA_PseU:0 3330 chr17 40818140 40818140 1 + C T rs151219449 40818140 + 40818120 40818160 41 AAGACCACGGTCCTGGATGTCATGAGGCGGCTGCTGCAGCC AAGACCACGGTCCTGGATGTTATGAGGCGGCTGCTGCAGCC Direct Gain 0 0.958534800549357 0 0.996521532535553 prediction 0.917069601098714 Functional Gain - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40818140 chr17:40818140 synonymous SNV . 0 21 hPsi_associated_SNPs_104370 0 0 0 0 1 Cytosol 0 0.438788569323488 0.993043065071106 0 hPsi_site_3330 iPseU_CNN:0.993043065071106;iRNA_PseU:0 3331 chr21 34732043 34732043 1 + G A rs76779730 34732043 - 34732023 34732063 41 TAAAAACACAAGTGTGTGTTCAGGTTCCCAGCCTGAATACA TAAAAACACAAGTGTGTGTTTAGGTTCCCAGCCTGAATACA Direct Gain 0 0.958524820375881 0 0.494742274284363 prediction 0.917049640751762 Functional Gain - IFNAR1 ENSG00000142166 UTR3 Human protein_coding chr21:34732043 chr21:34732043 . . 0 21 hPsi_associated_SNPs_104371 0 0 0 0 0 Endoplasmic reticulum 0 0.438717554944145 0 0 hPsi_site_3331 iPseU_CNN:0;iRNA_PseU:0 3332 chr15 59417044 59417044 1 + G A COAD 59417044 - 59417024 59417064 41 TATCAGTGGGGAGGCAAGGTCTTTGACGGCTTTTGAGTTCA TATCAGTGGGGAGGCAAGGTTTTTGACGGCTTTTGAGTTCA Direct Gain 0 0.95852210335092 0 0.946195363998413 prediction 0.91704420670184 Functional Gain - CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59417044 chr15:59417044 nonsynonymous SNV 0.484 0 21 hPsi_associated_SNPs_104372 0 0 0 0 0 Ribosome 0 0.438716938988073 0.892390727996826 0 hPsi_site_3332 iPseU_CNN:0.892390727996826;iRNA_PseU:0 3333 chr13 42882616 42882616 1 + C T BLCA 42882616 + 42882596 42882636 41 AGAAATAGAAGACTTTCAGTCAACCGAGTCTGTCAGTAGCC AGAAATAGAAGACTTTCAGTTAACCGAGTCTGTCAGTAGCC Direct Gain 0 0.958519811641471 0 0.998242616653442 prediction 0.917039623282942 Functional Gain - AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42882616 chr13:42882616 nonsynonymous SNV 0.771 2 21 hPsi_associated_SNPs_104373 0 0 1 0 1 Nucleus 0 0.438718594705374 0.996485233306884 0 hPsi_site_3333 iPseU_CNN:0.996485233306884;iRNA_PseU:0 3334 chr1 228238540 228238540 1 + C A UCEC 228238540 - 228238520 228238560 41 GGGCGTCGGCGAACTCCCGAGACACCATCCCACCAAACTCG GGGCGTCGGCGAACTCCCGATACACCATCCCACCAAACTCG Direct Gain 0 0.958512983660962 0 0.99620509147644 prediction 0.917025967321925 Functional Gain - WNT3A ENSG00000154342 CDS Human protein_coding chr1:228238540 chr1:228238540 nonsynonymous SNV 0.901 4 21 hPsi_associated_SNPs_104374 0 0 0 0 0 exosome 0 0.438459083260769 0.99241018295288 0 hPsi_site_3334 iPseU_CNN:0.99241018295288;iRNA_PseU:0 3335 chr2 206023503 206023503 1 + G T LUSC 206023503 + 206023483 206023523 41 CAAGCGAGCAGCTCACCTTTGAGATCCCCCTGAATGATTCA CAAGCGAGCAGCTCACCTTTTAGATCCCCCTGAATGATTCA Direct Gain 0 0.958511014400521 0 0.999987065792084 prediction 0.917022028801042 Functional Gain - PARD3B ENSG00000116117 CDS Human protein_coding chr2:206023503 chr2:206023503 stopgain 0.996 0 21 hPsi_associated_SNPs_104375 0 0 0 0 1 Nucleus 0 0.438644119694039 0.999974131584168 0 hPsi_site_3335 iPseU_CNN:0.999974131584168;iRNA_PseU:0 3336 chr6 167754505 167754505 1 + G T UCEC 167754505 + 167754485 167754525 41 GCTTTGAGCTCTTTGGGTTTGATATTTTGATTGATGACAAC GCTTTGAGCTCTTTGGGTTTTATATTTTGATTGATGACAAC Direct Gain 0 0.958510807367077 0 0.668178915977478 prediction 0.917021614734155 Functional Gain - TTLL2 ENSG00000120440 CDS Human protein_coding chr6:167754505 chr6:167754505 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_104376 0 0 0 0 0 Exosome 0 0.438671431857165 0.336357831954956 0 hPsi_site_3336 iPseU_CNN:0.336357831954956;iRNA_PseU:0 3337 chr20 36149769 36149769 1 + C T LUAD 36149769 + 36149749 36149789 41 GCGGCCTCGGCTGAACTGCTCATCATCGGCTGGTACATCTT GCGGCCTCGGCTGAACTGCTTATCATCGGCTGGTACATCTT Direct Gain 0 0.958505792078655 0 0.975539922714233 prediction 0.917011584157311 Functional Gain - NNAT ENSG00000053438 CDS Human protein_coding chr20:36149769 chr20:36149769 synonymous SNV . 0 21 hPsi_associated_SNPs_104377 0 0 0 0 1 exosome 0 0.438718592994764 0.951079845428466 0 hPsi_site_3337 iPseU_CNN:0.951079845428466;iRNA_PseU:0 3338 chr2 179318221 179318221 1 + G A CHOL 179318221 - 179318201 179318241 41 ACTTAGAGGTTGATATTTGTCAGCTTCACTGAGGCTTGGAA ACTTAGAGGTTGATATTTGTTAGCTTCACTGAGGCTTGGAA Direct Gain 0 0.95849864724504 0 0.852613210678101 prediction 0.916997294490079 Functional Gain - DFNB59 ENSG00000204311 CDS Human protein_coding chr2:179318221 chr2:179318221 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104378 0 0 0 0 0 exosome 0 0.438559569925356 0.705226421356202 0 hPsi_site_3338 iPseU_CNN:0.705226421356202;iRNA_PseU:0 3339 chr1 100490086 100490086 1 + G A rs192189070 100490086 - 100490066 100490106 41 GAGACGGAGTCTCGCTCTGTCACCCAGGCTGGGGTGCAGTG GAGACGGAGTCTCGCTCTGTTACCCAGGCTGGGGTGCAGTG Direct Gain 0 0.958497265259636 0 0.987581014633179 prediction 0.916994530519272 Functional Gain - SLC35A3 ENSG00000117620 UTR3 Human protein_coding chr1:100490086 chr1:100490086 . . 0 21 hPsi_associated_SNPs_104379 0 0 0 0 0 Endoplasmic reticulum 0 0.439086696305993 0.975162029266358 0 hPsi_site_3339 iPseU_CNN:0.975162029266358;iRNA_PseU:0 3340 chr20 30070236 30070236 1 + C T LUSC 30070236 + 30070216 30070256 41 CAGGCAGACCATGTGCCCATCATCCTCGTGGGCAACAAGGC CAGGCAGACCATGTGCCCATTATCCTCGTGGGCAACAAGGC Direct Gain 0 0.958495150972111 0 0.972007155418396 prediction 0.916990301944223 Functional Gain - REM1 ENSG00000088320 CDS Human protein_coding chr20:30070236 chr20:30070236 synonymous SNV . 0 21 hPsi_associated_SNPs_104380 0 0 0 0 1 exosome 0 0.438831107105539 0.944014310836792 0 hPsi_site_3340 iPseU_CNN:0.944014310836792;iRNA_PseU:0 3341 chr12 62783684 62783684 1 + C A LUAD 62783684 - 62783664 62783704 41 GAAAGGGCTGACCAAAAAGTGAAGAACCAGTATGGTGGGTA GAAAGGGCTGACCAAAAAGTTAAGAACCAGTATGGTGGGTA Direct Gain 0 0.958492046365569 0 0.990450382232666 prediction 0.916984092731139 Functional Gain - USP15 ENSG00000135655 CDS Human protein_coding chr12:62783684 chr12:62783684 stopgain 1.000 0 21 hPsi_associated_SNPs_104381 0 0 0 0 0 Ribosome 0 0.438718555399531 0.980900764465332 0 hPsi_site_3341 iPseU_CNN:0.980900764465332;iRNA_PseU:0 3342 chr12 120518744 120518744 1 + C T SKCM 120518744 + 120518724 120518764 41 AAAGAGGAGAGAGACCGACTCAGAGTCACTTCTGAGGACAA AAAGAGGAGAGAGACCGACTTAGAGTCACTTCTGAGGACAA Direct Gain 0 0.958491985810755 0 0.99516487121582 prediction 0.91698397162151 Functional Gain - BICDL1 ENSG00000135127 CDS Human protein_coding chr12:120518744 chr12:120518744 synonymous SNV . 0 21 hPsi_associated_SNPs_104382 0 0 0 0 2 chromatin 0 0.438718592995102 0.99032974243164 0 hPsi_site_3342 iPseU_CNN:0.99032974243164;iRNA_PseU:0 3343 chr14 65007906 65007906 1 + G A UCEC 65007906 - 65007886 65007926 41 ATCTCCTCTGGGAAGAAGGTCTTGGTCTCCCCCTTGTACTC ATCTCCTCTGGGAAGAAGGTTTTGGTCTCCCCCTTGTACTC Direct Gain 0 0.958483701115033 0 0.999687075614929 prediction 0.916967402230067 Functional Gain - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65007906 chr14:65007906 synonymous SNV . 0 21 hPsi_associated_SNPs_104383 0 0 0 0 0 Cytosol 0 0.438718592485305 0.999374151229858 0 hPsi_site_3343 iPseU_CNN:0.999374151229858;iRNA_PseU:0 3344 chr9 713340 713340 1 + G T LUSC 713340 + 713320 713360 41 TTCGGGGAACCTCACTCACAGATGGGCTCCCTCAACTCTCA TTCGGGGAACCTCACTCACATATGGGCTCCCTCAACTCTCA Direct Gain 0 0.958472701717668 0 0.999785125255585 prediction 0.916945403435337 Functional Gain - KANK1 ENSG00000107104 CDS Human protein_coding chr9:713340 chr9:713340 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104384 0 0 1 0 0 Nucleus 0 0.43871837863428 0.99957025051117 0 hPsi_site_3344 iPseU_CNN:0.99957025051117;iRNA_PseU:0 3345 chr3 46945048 46945048 1 + G A LUSC 46945048 - 46945028 46945068 41 GCAGGAGCCGTTGAGGAACCCATCGTCCTTGGGAGCAGCCA GCAGGAGCCGTTGAGGAACCTATCGTCCTTGGGAGCAGCCA Direct Gain 0 0.958470991756524 0 0.997632384300232 prediction 0.916941983513047 Functional Gain - PTH1R ENSG00000160801 CDS Human protein_coding chr3:46945048 chr3:46945048 nonsynonymous SNV 0.979 1 21 hPsi_associated_SNPs_104385 0 0 0 0 0 exosome 0 0.438718594446126 0.995264768600464 0 hPsi_site_3345 iPseU_CNN:0.995264768600464;iRNA_PseU:0 3346 chr15 99671728 99671728 1 + G A BLCA 99671728 - 99671708 99671748 41 AGCAGCCGGGGCCTCCGCTCCACCTTCCTCATCTGGGCTGC AGCAGCCGGGGCCTCCGCTCTACCTTCCTCATCTGGGCTGC Direct Gain 0 0.958470597270077 0 0.991147518157959 prediction 0.916941194540154 Functional Gain - SYNM ENSG00000182253 CDS Human protein_coding chr15:99671728 chr15:99671728 nonsynonymous SNV 0.000 3 21 hPsi_associated_SNPs_104386 0 0 0 0 0 exosome 0 0.438722216771483 0.982295036315918 0 hPsi_site_3346 iPseU_CNN:0.982295036315918;iRNA_PseU:0 3347 chr5 140516037 140516037 1 + G A OV 140516037 - 140516017 140516057 41 GGTGAGTTCAGGGGCGTTGTCATTCACATCCACCACTTCTA GGTGAGTTCAGGGGCGTTGTTATTCACATCCACCACTTCTA Direct Gain 0 0.958457929661323 0 0.999458432197571 prediction 0.916915859322646 Functional Gain - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140516037 chr5:140516037 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_104387 0 0 0 0 0 Endoplasmic reticulum 0 0.438719284892983 0.998916864395142 0 hPsi_site_3347 iPseU_CNN:0.998916864395142;iRNA_PseU:0 3348 chr7 128589877 128589877 1 + G A rs188292455 128589877 - 128589857 128589897 41 GGGGACTAAGAGAACTCACTCACTGTCCCCACCTCGGGGGA GGGGACTAAGAGAACTCACTTACTGTCCCCACCTCGGGGGA Direct Gain 0 0.958447879788106 0 0.93175208568573 prediction 0.916895759576213 Functional Gain - IRF5 ENSG00000128604 UTR3 Human protein_coding chr7:128589877 chr7:128589877 . . 0 21 hPsi_associated_SNPs_104388 0 0 1 0 0 exosome 0 0.438718591313873 0.86350417137146 0 hPsi_site_3348 iPseU_CNN:0.86350417137146;iRNA_PseU:0 3349 chr5 134044464 134044464 1 + C T UCEC 134044464 + 134044444 134044484 41 GATGCTCTAGTGAATGCAGTCATTGACTCCCTTTCAGCTTA GATGCTCTAGTGAATGCAGTTATTGACTCCCTTTCAGCTTA Direct Gain 0 0.958425955229963 0 0.1718789935112 prediction 0.916851910459925 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134044464 chr5:134044464 synonymous SNV . 0 21 hPsi_associated_SNPs_104389 0 0 1 0 1 Ribosome 0 0.438725867446168 0 0 hPsi_site_3349 iPseU_CNN:0;iRNA_PseU:0 3350 chr6 169053824 169053824 1 + G A ESCA 169053824 - 169053804 169053844 41 TTGTACGGAGATGGATTTGTCATTATTCACGTCACAGTATT TTGTACGGAGATGGATTTGTTATTATTCACGTCACAGTATT Direct Gain 0 0.958419803525082 0 0.963330328464508 prediction 0.916839607050164 Functional Gain - SMOC2 ENSG00000112562 CDS Human protein_coding chr6:169053824 chr6:169053824 nonsynonymous SNV 0.359 2 21 hPsi_associated_SNPs_104390 0 0 0 0 0 Ribosome 0 0.438712164022568 0.926660656929016 0 hPsi_site_3350 iPseU_CNN:0.926660656929016;iRNA_PseU:0 3351 chr8 121357796 121357796 1 + G A BLCA 121357796 - 121357776 121357816 41 GGGGCCCAGCTTACCTCGTTCTCCTGGGGTCCCTGGCACGC GGGGCCCAGCTTACCTCGTTTTCCTGGGGTCCCTGGCACGC Direct Gain 0 0.958418855201924 0 0.356275230646133 prediction 0.916837710403847 Functional Gain - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121357796 chr8:121357796 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_104391 0 0 0 0 0 Ribosome 0 0.438718593011909 0 0 hPsi_site_3351 iPseU_CNN:0;iRNA_PseU:0 3352 chr16 30081308 30081308 1 + G A CESC 30081308 - 30081288 30081328 41 TCCTGCGCAGCCTTCAGGTTCTCCTTCTTCCCGCCCCAGGC TCCTGCGCAGCCTTCAGGTTTTCCTTCTTCCCGCCCCAGGC Direct Gain 0 0.958417189893389 0 0.999908804893494 prediction 0.916834379786778 Functional Gain - ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081308 chr16:30081308 synonymous SNV . 0 21 hPsi_associated_SNPs_104392 0 0 0 0 0 Cytosol 0 0.438718594423619 0.999817609786988 0 hPsi_site_3352 iPseU_CNN:0.999817609786988;iRNA_PseU:0 3353 chr7 98931009 98931009 1 + C A SARC 98931009 - 98930989 98931029 41 CTGTTCCAGGCATGACAGGTGATTGGCTCTAGTAAAAACTG CTGTTCCAGGCATGACAGGTTATTGGCTCTAGTAAAAACTG Direct Gain 0 0.958413276767305 0 0.977354049682617 prediction 0.916826553534611 Functional Gain - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98931009 chr7:98931009 synonymous SNV . 0 21 hPsi_associated_SNPs_104393 0 0 0 0 0 Cytosol 0 0.438760874803821 0.954708099365234 0 hPsi_site_3353 iPseU_CNN:0.954708099365234;iRNA_PseU:0 3354 chr11 119058040 119058040 1 + C T rs533817767 119058040 + 119058020 119058060 41 GACAGTATTGGCACGGCATGCACATGACGTGGCCCGAGCTC GACAGTATTGGCACGGCATGTACATGACGTGGCCCGAGCTC Direct Gain 0 0.958403988362015 0 0.999989867210388 prediction 0.91680797672403 Functional Gain - PDZD3 ENSG00000172367 CDS Human protein_coding chr11:119058040 chr11:119058040 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_104394 0 0 0 0 1 exosome 0 0.413724976262908 0.999979734420776 0 hPsi_site_3354 iPseU_CNN:0.999979734420776;iRNA_PseU:0 3355 chr17 56321413 56321413 1 + C T rs549382833 56321413 + 56321393 56321433 41 AGTCAGGCCAAGGTCCAAGTCAACAAGGCCTTCCTGGACTC AGTCAGGCCAAGGTCCAAGTTAACAAGGCCTTCCTGGACTC Direct Gain 0 0.958400749393835 0 0.621884644031525 prediction 0.91680149878767 Functional Gain - LPO ENSG00000167419 CDS Human protein_coding chr17:56321413 chr17:56321413 synonymous SNV . 0 21 hPsi_associated_SNPs_104395 0 0 0 0 2 cytosol 0 0.438718588083943 0.24376928806305 0 hPsi_site_3355 iPseU_CNN:0.24376928806305;iRNA_PseU:0 3356 chr14 64443311 64443311 1 + G A STAD 64443311 - 64443291 64443331 41 ATGGAGGGGTGGGGGCAAGGCATAATTTAGCTTTATTTTCC ATGGAGGGGTGGGGGCAAGGTATAATTTAGCTTTATTTTCC Direct Gain 0 0.958399556266611 0 0.417628884315491 prediction 0.916799112533221 Functional Gain - SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64443311 chr14:64443311 nonsynonymous SNV 0.018 0 21 hPsi_associated_SNPs_104396 0 0 0 0 0 Nucleus 0 0.438718592995102 0 0 hPsi_site_3356 iPseU_CNN:0;iRNA_PseU:0 3357 chr1 227170729 227170729 1 + G A UCEC 227170729 - 227170709 227170749 41 ATCAGGCCGCCTACCTGGATCTTCATGGCCACCTCGCGGCC ATCAGGCCGCCTACCTGGATTTTCATGGCCACCTCGCGGCC Direct Gain 0 0.958396856636856 0 0.999998450279236 prediction 0.916793713273712 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227170729 chr1:227170729 synonymous SNV . 0 21 hPsi_associated_SNPs_104397 0 0 1 0 0 Nucleus 0 0.438718682134101 0.999996900558472 0 hPsi_site_3357 iPseU_CNN:0.999996900558472;iRNA_PseU:0 3358 chr14 79175628 79175628 1 + G A OV 79175628 - 79175608 79175648 41 ACAACTTCGCCATAGATTTTCATCTTGGTGTCCGCAATCCG ACAACTTCGCCATAGATTTTTATCTTGGTGTCCGCAATCCG Direct Gain 0 0.958393439675837 0 0.894610404968262 prediction 0.916786879351673 Functional Gain - NRXN3 ENSG00000021645 CDS Human protein_coding chr14:79175628 chr14:79175628 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104398 0 0 0 0 0 chromatin 0 0.438410846511865 0.789220809936524 0 hPsi_site_3358 iPseU_CNN:0.789220809936524;iRNA_PseU:0 3359 chr3 173998935 173998935 1 + G T LUSC 173998935 + 173998915 173998955 41 CTATGAGGAGGTCACCTGATGATGTTCCCTTAATGACACCC CTATGAGGAGGTCACCTGATTATGTTCCCTTAATGACACCC Direct Gain 0 0.958387922255948 0 0.987046480178833 prediction 0.916775844511896 Functional Gain - NLGN1 ENSG00000169760 CDS Human protein_coding chr3:173998935 chr3:173998935 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_104399 0 0 0 0 0 exosome 0 0.438718602557528 0.974092960357666 0 hPsi_site_3359 iPseU_CNN:0.974092960357666;iRNA_PseU:0 3360 chr10 129183066 129183066 1 + G A LIHC 129183066 - 129183046 129183086 41 GGTGAGGTGGGCCACACACACATCCTCCGACCACTAAGGGA GGTGAGGTGGGCCACACACATATCCTCCGACCACTAAGGGA Direct Gain 0 0.958387807061585 0 0.291203498840332 prediction 0.91677561412317 Functional Gain - DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129183066 chr10:129183066 nonsynonymous SNV 0.993 0 21 hPsi_associated_SNPs_104400 0 0 0 0 0 Nucleus 0 0.438718635589169 0 0 hPsi_site_3360 iPseU_CNN:0;iRNA_PseU:0 3361 chr6 39855351 39855351 1 + C T UCEC 39855351 + 39855331 39855371 41 GGCCGGAGGGCCCAAAACTGCATCATCCTTCTTTCCAAGTA GGCCGGAGGGCCCAAAACTGTATCATCCTTCTTTCCAAGTA Direct Gain 0 0.958384483698717 0 0.238661229610443 prediction 0.916768967397433 Functional Gain - DAAM2 ENSG00000146122 CDS Human protein_coding chr6:39855351 chr6:39855351 synonymous SNV . 0 21 hPsi_associated_SNPs_104401 0 0 0 0 2 exosome 0 0.438718587013214 0 0 hPsi_site_3361 iPseU_CNN:0;iRNA_PseU:0 3362 chr17 7404869 7404869 1 + G A BLCA 7404869 - 7404849 7404889 41 CCCTGGGGTGGGCTCCAGCTCATTGTTGTGTGCCTTCTCGA CCCTGGGGTGGGCTCCAGCTTATTGTTGTGTGCCTTCTCGA Direct Gain 0 0.958382079773344 0 0.980983734130859 prediction 0.916764159546689 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7404869 chr17:7404869 nonsynonymous SNV 0.972 1 21 hPsi_associated_SNPs_104402 0 0 0 0 0 Nucleus 0 0.438718592990006 0.961967468261718 0 hPsi_site_3362 iPseU_CNN:0.961967468261718;iRNA_PseU:0 3363 chr6 31430992 31430992 1 + C T ESCA 31430992 + 31430972 31431012 41 CAGACGCCAAGGTTGCGGGTCATGGAGTCCCGAACCCTCCT CAGACGCCAAGGTTGCGGGTTATGGAGTCCCGAACCCTCCT Direct Gain 0 0.958378138405663 0 0.962395846843719 prediction 0.916756276811325 Functional Gain - HCP5 ENSG00000206337;ENSG00000233902 ncRNA_exonic Human other chr6:31430992 chr6:31430992 . . 0 21 hPsi_associated_SNPs_104403 0 0 1 0 1 unknown 0 0.438720933409259 0.924791693687438 0 hPsi_site_3363 iPseU_CNN:0.924791693687438;iRNA_PseU:0 3364 chr18 9119489 9119489 1 + A T rs41274300 9119489 + 9119469 9119509 41 CAGAGGATAGAGGCAATTGTAAAAAACTATCCAGAAGGCCA CAGAGGATAGAGGCAATTGTTAAAAACTATCCAGAAGGCCA Direct Gain 0 0.958374984362118 0 0.40288108587265 prediction 0.916749968724236 Functional Gain - NDUFV2 ENSG00000178127 CDS Human protein_coding chr18:9119489 chr18:9119489 synonymous SNV . 0 21 hPsi_associated_SNPs_104404 2 0 1 0 2 Cytosol 0 0.438383111364635 0 0 hPsi_site_3364 iPseU_CNN:0;iRNA_PseU:0 3365 chr19 42928267 42928267 1 + C T rs182587066 42928267 + 42928247 42928287 41 GAGGGAGCCCCGCTTTCCCTCTCCTGTCTCCTAGTTCTCCT GAGGGAGCCCCGCTTTCCCTTTCCTGTCTCCTAGTTCTCCT Direct Gain 0 0.958373330228324 0 0.00736364722251892 prediction 0.916746660456648 Functional Gain - LIPE-AS1 ENSG00000213904 ncRNA_exonic Human antisense chr19:42928267 chr19:42928267 . . 0 21 hPsi_associated_SNPs_104405 0 0 0 0 0 unknown 0 0.438718592995099 0 0 hPsi_site_3365 iPseU_CNN:0;iRNA_PseU:0 3366 chr22 39448100 39448100 1 + C A GBM 39448100 - 39448080 39448120 41 GAGGAAGCACCTTTCTGCATGACAATGGGTCTCAGGATCCA GAGGAAGCACCTTTCTGCATTACAATGGGTCTCAGGATCCA Direct Gain 0 0.958367302215986 0 0.994960367679596 prediction 0.916734604431973 Functional Gain - APOBEC3F ENSG00000128394 CDS Human protein_coding chr22:39448100 chr22:39448100 nonsynonymous SNV 0.001 4 21 hPsi_associated_SNPs_104406 0 0 0 0 0 Nucleus 0 0.438718574926852 0.989920735359192 0 hPsi_site_3366 iPseU_CNN:0.989920735359192;iRNA_PseU:0 3367 chr6 27115154 27115154 1 + C T rs556603081 27115154 + 27115134 27115174 41 AGACCCGTATCATCCCGCGTCACCTCCAACTGGCCATCCGC AGACCCGTATCATCCCGCGTTACCTCCAACTGGCCATCCGC Direct Gain 0 0.958365532500806 0 0.999996483325958 prediction 0.916731065001611 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115154 chr6:27115154 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_104407 0 0 1 0 0 cytosol 0 0.438724121398659 0.999992966651916 0 hPsi_site_3367 iPseU_CNN:0.999992966651916;iRNA_PseU:0 3368 chr20 335165 335165 1 + C T rs73891945 335165 + 335145 335185 41 AGTGGGTTGTCTTTGCCCCTCAAAGTCCACCTACCTAGAAA AGTGGGTTGTCTTTGCCCCTTAAAGTCCACCTACCTAGAAA Direct Gain 0 0.958363824227421 0 0.971650362014771 prediction 0.916727648454842 Functional Gain - NRSN2 ENSG00000125841 UTR3 Human protein_coding chr20:335165 chr20:335165 . . 0 21 hPsi_associated_SNPs_104408 0 0 1 0 0 cytosol 0 0.438718593780624 0.943300724029542 0 hPsi_site_3368 iPseU_CNN:0.943300724029542;iRNA_PseU:0 3369 chr11 124703483 124703483 1 + C T rs144599053 124703483 + 124703463 124703503 41 TGAATAGCTGGGATTACAGGCATGCACTACCATGACCAGCA TGAATAGCTGGGATTACAGGTATGCACTACCATGACCAGCA Direct Gain 0 0.958362843007291 0 0.999464452266693 prediction 0.916725686014583 Functional Gain - LOC100507283 ENSG00000245498 ncRNA_exonic Human antisense chr11:124703483 chr11:124703483 . . 0 21 hPsi_associated_SNPs_104409 0 0 0 0 0 unknown 0 0.43814670636846 0.998928904533386 0 hPsi_site_3369 iPseU_CNN:0.998928904533386;iRNA_PseU:0 3370 chr16 50733722 50733722 1 + G T UCEC 50733722 + 50733702 50733742 41 ACTCGCTCCACCCAGCCCGAGACCTGCAGAGTCACCGGCCA ACTCGCTCCACCCAGCCCGATACCTGCAGAGTCACCGGCCA Direct Gain 0 0.958355158962214 0 0.994153380393982 prediction 0.916710317924428 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50733722 chr16:50733722 nonsynonymous SNV 0.601 4 21 hPsi_associated_SNPs_104410 0 0 0 0 0 exosome 0 0.43864306117996 0.988306760787964 0 hPsi_site_3370 iPseU_CNN:0.988306760787964;iRNA_PseU:0 3371 chr12 54903724 54903724 1 + C T BLCA 54903724 + 54903704 54903744 41 AGTGCCCAACTTCTAAGCCTCATCAGCAACCCCCCAGCCAT AGTGCCCAACTTCTAAGCCTTATCAGCAACCCCCCAGCCAT Direct Gain 0 0.958353968975695 0 0.986859798431396 prediction 0.91670793795139 Functional Gain - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54903724 chr12:54903724 synonymous SNV . 0 21 hPsi_associated_SNPs_104411 0 0 1 0 2 Cytosol 0 0.438718592994288 0.973719596862792 0 hPsi_site_3371 iPseU_CNN:0.973719596862792;iRNA_PseU:0 3372 chr19 16060433 16060433 1 + G A BRCA 16060433 - 16060413 16060453 41 ACAGCCTATCAGGGCTGTGACACACACCAGCATCACACCCA ACAGCCTATCAGGGCTGTGATACACACCAGCATCACACCCA Direct Gain 0 0.958344820421363 0 0.811841011047363 prediction 0.916689640842725 Functional Gain - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060433 chr19:16060433 nonsynonymous SNV 0.040 0 21 hPsi_associated_SNPs_104412 0 0 0 0 0 unknown 0 0.438527178420284 0.623682022094726 0 hPsi_site_3372 iPseU_CNN:0.623682022094726;iRNA_PseU:0 3373 chr2 69472878 69472878 1 + G A rs141086331 69472878 - 69472858 69472898 41 TTGAGAGCATCTTGCAGTTTCACTGTCTCTGGAACCTTCTA TTGAGAGCATCTTGCAGTTTTACTGTCTCTGGAACCTTCTA Direct Gain 0 0.95834302594446 0 0.997437715530396 prediction 0.91668605188892 Functional Gain - ANTXR1 ENSG00000169604 UTR3 Human protein_coding chr2:69472878 chr2:69472878 . . 0 21 hPsi_associated_SNPs_104413 0 0 0 0 0 Endoplasmic reticulum 0 0.438029550181858 0.994875431060792 0 hPsi_site_3373 iPseU_CNN:0.994875431060792;iRNA_PseU:0 3374 chr5 150844678 150844678 1 + G A LIHC 150844678 - 150844658 150844698 41 GCAGGGGCTGGATTCTAGTCCATACATCACAGTATCACCAT GCAGGGGCTGGATTCTAGTCTATACATCACAGTATCACCAT Direct Gain 0 0.958343017940574 0 0.999706983566284 prediction 0.916686035881147 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150844678 chr5:150844678 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104414 0 0 0 0 0 Endoplasmic reticulum 0 0.438709932790907 0.999413967132568 0 hPsi_site_3374 iPseU_CNN:0.999413967132568;iRNA_PseU:0 3375 chr12 78598913 78598913 1 + C A LIHC 78598913 - 78598893 78598933 41 ACATCTGATTCTTACCAGGGGATCTCCTTCTGTGTCAGTTT ACATCTGATTCTTACCAGGGTATCTCCTTCTGTGTCAGTTT Direct Gain 0 0.958342289255826 0 0.149998605251312 prediction 0.916684578511651 Functional Gain - NAV3 ENSG00000067798 CDS Human protein_coding chr12:78598913 chr12:78598913 nonsynonymous SNV 0.992 3 21 hPsi_associated_SNPs_104415 0 0 0 0 0 Nucleus 0 0.438718593002767 0 0 hPsi_site_3375 iPseU_CNN:0;iRNA_PseU:0 3376 chr3 100328802 100328802 1 + C A LUAD 100328802 - 100328782 100328822 41 ACATTACCTCTTTGGATCCTGATCACAATCCTCCAGATGCC ACATTACCTCTTTGGATCCTTATCACAATCCTCCAGATGCC Direct Gain 0 0.958337120017494 0 0.978249669075012 prediction 0.916674240034988 Functional Gain - ADGRG7 ENSG00000144820 CDS Human protein_coding chr3:100328802 chr3:100328802 synonymous SNV . 0 21 hPsi_associated_SNPs_104416 0 0 0 0 0 exosome 0 0.438727400912343 0.956499338150024 0 hPsi_site_3376 iPseU_CNN:0.956499338150024;iRNA_PseU:0 3377 chr22 39128405 39128405 1 + C T rs115868749 39128405 + 39128385 39128425 41 GCATGGCTTCCGTGTTCAGGCTCCCTCACCAGCTGGTGACA GCATGGCTTCCGTGTTCAGGTTCCCTCACCAGCTGGTGACA Direct Gain 0 0.95833332626034 0 0.985143661499023 prediction 0.916666652520679 Functional Gain - GTPBP1 ENSG00000257034 ncRNA_exonic Human other chr22:39128405 chr22:39128405 . . 0 21 hPsi_associated_SNPs_104417 0 0 1 0 0 Ribosome 0 0.438714767610011 0.970287322998046 0 hPsi_site_3377 iPseU_CNN:0.970287322998046;iRNA_PseU:0 3378 chr20 49195040 49195040 1 + G T SARC 49195040 + 49195020 49195060 41 GAATCACCAGCCTCATTCTTGAACTTTCTTTTCAAAGTCCG GAATCACCAGCCTCATTCTTTAACTTTCTTTTCAAAGTCCG Direct Gain 0 0.958327586107377 0 0.0845225155353546 prediction 0.916655172214754 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49195040 chr20:49195040 nonsynonymous SNV 0.995 5 21 hPsi_associated_SNPs_104418 0 0 1 0 1 Ribosome 0 0.438718591329902 0 0 hPsi_site_3378 iPseU_CNN:0;iRNA_PseU:0 3379 chr16 84209590 84209590 1 + G A rs142345677 84209590 - 84209570 84209610 41 CGTGTAGTCCAGTTCAGGGTCACTGTCATCACTCAAGCTCG CGTGTAGTCCAGTTCAGGGTTACTGTCATCACTCAAGCTCG Direct Gain 0 0.958314047007631 0 0.946576595306396 prediction 0.916628094015262 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84209590 chr16:84209590 nonsynonymous SNV 0.967 2 21 hPsi_associated_SNPs_104419 2 0 1 0 0 Cytosol 0 0.438732675684663 0.893153190612792 0 hPsi_site_3379 iPseU_CNN:0.893153190612792;iRNA_PseU:0 3380 chr5 176083833 176083833 1 + C T LUAD 176083833 + 176083813 176083853 41 TCCAGGTACCCTTGTGGCCCCACGTGCCCCTCCCCTTGCCG TCCAGGTACCCTTGTGGCCCTACGTGCCCCTCCCCTTGCCG Direct Gain 0 0.958313235501739 0 0.055933028459549 prediction 0.916626471003479 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176083833 chr5:176083833 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104420 0 0 1 0 1 Endoplasmic reticulum 0 0.438718564944769 0 0 hPsi_site_3380 iPseU_CNN:0;iRNA_PseU:0 3381 chr2 108863710 108863710 1 + C A UCEC 108863710 - 108863690 108863730 41 GGGACTCCATCTACTTCCATGATGTTAAACAGTTCTGGCTT GGGACTCCATCTACTTCCATTATGTTAAACAGTTCTGGCTT Direct Gain 0 0.958311518386492 0 0.853174209594727 prediction 0.916623036772984 Functional Gain - SULT1C3 ENSG00000196228 CDS Human protein_coding chr2:108863710 chr2:108863710 synonymous SNV . 0 21 hPsi_associated_SNPs_104421 0 0 0 0 0 exosome 0 0.438718592488673 0.706348419189454 0 hPsi_site_3381 iPseU_CNN:0.706348419189454;iRNA_PseU:0 3382 chr16 681681 681681 1 + C T rs535136651 681681 + 681661 681701 41 GGCGACCACCCCCACCCCGTCACTGCCTCTCCTCCCACCCT GGCGACCACCCCCACCCCGTTACTGCCTCTCCTCCCACCCT Direct Gain 0 0.958310279037238 0 0.99987655878067 prediction 0.916620558074476 Functional Gain - WFIKKN1 ENSG00000127578 intronic Human protein_coding chr16:681681 chr16:681681 . . 0 21 hPsi_associated_SNPs_104422 0 0 0 0 0 exosome 0 0.438717846046088 0.99975311756134 0 hPsi_site_3382 iPseU_CNN:0.99975311756134;iRNA_PseU:0 3383 chr16 68849489 68849489 1 + C T HNSC 68849489 + 68849469 68849509 41 AATGTGGTACCTTTTGAGGTCTCTCTCACCACCTCCACAGC AATGTGGTACCTTTTGAGGTTTCTCTCACCACCTCCACAGC Direct Gain 0 0.958297120681188 0 0.993732929229736 prediction 0.916594241362376 Functional Gain - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68849489 chr16:68849489 synonymous SNV . 0 21 hPsi_associated_SNPs_104423 3 0 0 0 1 Nucleus 0 0.438114129786361 0.987465858459472 0 hPsi_site_3383 iPseU_CNN:0.987465858459472;iRNA_PseU:0 3384 chr9 124088906 124088906 1 + C T UCEC 124088906 + 124088886 124088926 41 GGGCAGACAGCCCCTGCCAGCACCCGCCTCTTCCAGGTCCG GGGCAGACAGCCCCTGCCAGTACCCGCCTCTTCCAGGTCCG Direct Gain 0 0.958296596302908 0 0.768471956253052 prediction 0.916593192605816 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124088906 chr9:124088906 synonymous SNV . 0 21 hPsi_associated_SNPs_104424 0 0 1 0 1 Cytosol 0 0.438718829708216 0.536943912506104 0 hPsi_site_3384 iPseU_CNN:0.536943912506104;iRNA_PseU:0 3385 chr19 19459745 19459745 1 + C T BLCA 19459745 + 19459725 19459765 41 CCGGACCACAGCTTCCCTGTCAGGTGAGCCGCTCCAGGCAC CCGGACCACAGCTTCCCTGTTAGGTGAGCCGCTCCAGGCAC Direct Gain 0 0.958294652291851 0 0.989414036273956 prediction 0.916589304583701 Functional Gain - MAU2 ENSG00000129933 CDS Human protein_coding chr19:19459745 chr19:19459745 synonymous SNV . 0 21 hPsi_associated_SNPs_104425 0 0 1 0 2 Nucleus 0 0.438532943042915 0.978828072547912 0 hPsi_site_3385 iPseU_CNN:0.978828072547912;iRNA_PseU:0 3386 chr16 69874107 69874107 1 + T A CHOL 69874107 - 69874087 69874127 41 CAACAGTTGGCCCGTCCAGGAAAATTGTCAGCTCTCCGCCT CAACAGTTGGCCCGTCCAGGTAAATTGTCAGCTCTCCGCCT Direct Gain 0 0.958284003835705 0 0.997304558753967 prediction 0.91656800767141 Functional Gain - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69874107 chr16:69874107 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104426 0 0 0 0 0 Ribosome 0 0.43871855942125 0.994609117507934 0 hPsi_site_3386 iPseU_CNN:0.994609117507934;iRNA_PseU:0 3387 chr19 21606272 21606272 1 + G A LAML 21606272 - 21606252 21606292 41 GAATTGGTAGAAAGATGTGCCACATTCTTCACATTTGTAGG GAATTGGTAGAAAGATGTGCTACATTCTTCACATTTGTAGG Direct Gain 0 0.958282703168285 0 0.996501803398132 prediction 0.916565406336571 Functional Gain - ZNF493 ENSG00000196268 CDS Human protein_coding chr19:21606272 chr19:21606272 nonsynonymous SNV 0.002 3 21 hPsi_associated_SNPs_104427 0 0 0 0 0 nucleoplasm 0 0.438687869774637 0.993003606796264 0 hPsi_site_3387 iPseU_CNN:0.993003606796264;iRNA_PseU:0 3388 chr1 155911667 155911667 1 + G T COAD 155911667 + 155911647 155911687 41 GGGGGCCATTGGCTTGCTGGGAAATTTGGCGGTGCTGTGGG GGGGGCCATTGGCTTGCTGGTAAATTTGGCGGTGCTGTGGG Direct Gain 0 0.958280469413932 0 0.760023534297943 prediction 0.916560938827863 Functional Gain - RXFP4 ENSG00000173080 CDS Human protein_coding chr1:155911667 chr1:155911667 nonsynonymous SNV 0.985 3 21 hPsi_associated_SNPs_104428 0 0 0 0 0 exosome 0 0.438718592994907 0.520047068595886 0 hPsi_site_3388 iPseU_CNN:0.520047068595886;iRNA_PseU:0 3389 chr22 44351353 44351353 1 + G A rs182331873 44351353 - 44351333 44351373 41 GGCGGAGCTGCAGGTCAAGGCAACTCCCACAAACCCCCGGA GGCGGAGCTGCAGGTCAAGGTAACTCCCACAAACCCCCGGA Direct Gain 0 0.958278209524629 0 0.993223786354065 prediction 0.916556419049259 Functional Gain - SAMM50 ENSG00000100347 UTR5 Human protein_coding chr22:44351353 chr22:44351353 . . 0 21 hPsi_associated_SNPs_104429 0 0 0 0 0 Cytosol 0 0.438718286336364 0.98644757270813 0 hPsi_site_3389 iPseU_CNN:0.98644757270813;iRNA_PseU:0 3390 chr12 40692977 40692977 1 + G A SARC 40692977 - 40692957 40692997 41 GATAGGGATGAAATGTGGTTCTTACTAAGGTTTAAAATCTT GATAGGGATGAAATGTGGTTTTTACTAAGGTTTAAAATCTT Direct Gain 0 0.958277849604713 0 0.998452842235565 prediction 0.916555699209426 Functional Gain - LRRK2 ENSG00000188906 CDS Human protein_coding chr12:40692977 chr12:40692977 synonymous SNV . 0 21 hPsi_associated_SNPs_104430 0 0 0 0 0 exosome 0 0.438718467963872 0.99690568447113 0 hPsi_site_3390 iPseU_CNN:0.99690568447113;iRNA_PseU:0 3391 chr18 2751361 2751361 1 + G A COAD 2751361 - 2751341 2751381 41 GGTCGGTTCCCACTGGTAGACAGCTTCCACATTTTCATGGA GGTCGGTTCCCACTGGTAGATAGCTTCCACATTTTCATGGA Direct Gain 0 0.958275981292081 0 0.999811768531799 prediction 0.916551962584162 Functional Gain - SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2751361 chr18:2751361 synonymous SNV . 0 21 hPsi_associated_SNPs_104431 0 0 0 0 0 Nucleus 0 0.438718592977927 0.999623537063598 0 hPsi_site_3391 iPseU_CNN:0.999623537063598;iRNA_PseU:0 3392 chr20 31024488 31024488 1 + C T rs6057581 31024488 + 31024468 31024508 41 GGCCTGCGGACCCGATGCCTCTTCCTGCTGAGATCCCTCCA GGCCTGCGGACCCGATGCCTTTTCCTGCTGAGATCCCTCCA Direct Gain 0 0.958272841627285 0 0.461753189563751 prediction 0.91654568325457 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024488 chr20:31024488 nonsynonymous SNV 0.246 2 21 hPsi_associated_SNPs_104432 2 0 1 0 0 Nucleus 0 0.438718589973852 0 0 hPsi_site_3392 iPseU_CNN:0;iRNA_PseU:0 3393 chr1 152857138 152857138 1 + C T COAD 152857138 + 152857118 152857158 41 TTGGAGACCAAGCCTGAAGTCTCACCCCTTAACATGGAGTC TTGGAGACCAAGCCTGAAGTTTCACCCCTTAACATGGAGTC Direct Gain 0 0.958262649314151 0 0.995052456855774 prediction 0.916525298628302 Functional Gain - SMCP ENSG00000163206 CDS Human protein_coding chr1:152857138 chr1:152857138 synonymous SNV . 0 21 hPsi_associated_SNPs_104433 0 0 0 0 0 unknown 0 0.438720336421552 0.990104913711548 0 hPsi_site_3393 iPseU_CNN:0.990104913711548;iRNA_PseU:0 3394 chr17 48435844 48435844 1 + G T BLCA 48435844 + 48435824 48435864 41 AGTTCTGGGAACCGCTGGGTGAGACCCGCTTCCTTGTGCTG AGTTCTGGGAACCGCTGGGTTAGACCCGCTTCCTTGTGCTG Direct Gain 0 0.958262320770183 0 0.987160205841064 prediction 0.916524641540366 Functional Gain - XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48435844 chr17:48435844 stopgain 1.000 1 21 hPsi_associated_SNPs_104434 0 0 1 0 1 nucleolus 0 0.438729151009145 0.974320411682128 0 hPsi_site_3394 iPseU_CNN:0.974320411682128;iRNA_PseU:0 3395 chr6 96651790 96651790 1 + C A LUAD 96651790 - 96651770 96651810 41 GCATTGTATAGCTTTTCCGTGATGTAATCCTTGTGGATTGA GCATTGTATAGCTTTTCCGTTATGTAATCCTTGTGGATTGA Direct Gain 0 0.958245801685163 0 0.980812191963196 prediction 0.916491603370326 Functional Gain - FUT9 ENSG00000172461 CDS Human protein_coding chr6:96651790 chr6:96651790 synonymous SNV . 0 21 hPsi_associated_SNPs_104435 0 0 0 0 0 exosome 0 0.438669881559333 0.961624383926392 0 hPsi_site_3395 iPseU_CNN:0.961624383926392;iRNA_PseU:0 3396 chr1 160171065 160171065 1 + G A CESC 160171065 - 160171045 160171085 41 AGCAGAAGGCAGGTCCTCCTCATCGTCCATTTCCATCCATA AGCAGAAGGCAGGTCCTCCTTATCGTCCATTTCCATCCATA Direct Gain 0 0.95824377851033 0 0.800898909568787 prediction 0.916487557020661 Functional Gain - CASQ1 ENSG00000143318 CDS Human protein_coding chr1:160171065 chr1:160171065 nonsynonymous SNV 0.935 1 21 hPsi_associated_SNPs_104436 0 0 0 0 0 exosome 0 0.438430888879619 0.601797819137574 0 hPsi_site_3396 iPseU_CNN:0.601797819137574;iRNA_PseU:0 3397 chr8 126194360 126194360 1 + C A GBM 126194360 - 126194340 126194380 41 TAAATCTGGTATTTTTTCTGGACGTTCTTCTTTCACCTAAG TAAATCTGGTATTTTTTCTGTACGTTCTTCTTTCACCTAAG Direct Gain 0 0.958236591475349 0 0.999999642372131 prediction 0.916473182950698 Functional Gain - NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126194360 chr8:126194360 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_104437 0 0 0 0 0 Cytosol 0 0.438718829251517 0.999999284744262 0 hPsi_site_3397 iPseU_CNN:0.999999284744262;iRNA_PseU:0 3398 chr17 4788866 4788866 1 + C T UCEC 4788866 + 4788846 4788886 41 TACTGGATGGCTCCAGAGGTCATCGCCTGTGATGAGAACCC TACTGGATGGCTCCAGAGGTTATCGCCTGTGATGAGAACCC Direct Gain 0 0.958233354455947 0 0.999815344810486 prediction 0.916466708911894 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4788866 chr17:4788866 synonymous SNV . 0 21 hPsi_associated_SNPs_104438 0 0 1 0 1 Ribosome 0 0.438720079999385 0.999630689620972 0 hPsi_site_3398 iPseU_CNN:0.999630689620972;iRNA_PseU:0 3399 chr8 110131356 110131356 1 + C T SKCM 110131356 + 110131336 110131376 41 GACTCTAGTGGTTGTCAACTCATTTCTCTCCAGTCCTTTCC GACTCTAGTGGTTGTCAACTTATTTCTCTCCAGTCCTTTCC Direct Gain 0 0.958231669167196 0 0.938596129417419 prediction 0.916463338334392 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110131356 chr8:110131356 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104439 0 0 0 0 1 exosome 0 0.438718595927628 0.877192258834838 0 hPsi_site_3399 iPseU_CNN:0.877192258834838;iRNA_PseU:0 3400 chr15 99465401 99465401 1 + C T CESC 99465401 + 99465381 99465421 41 GAAAGGAAGCGGAGAGATGTCATGCAAGTGGCCAACACCAC GAAAGGAAGCGGAGAGATGTTATGCAAGTGGCCAACACCAC Direct Gain 0 0.958222737280195 0 0.968644261360168 prediction 0.91644547456039 Functional Gain - IGF1R ENSG00000140443 CDS Human protein_coding chr15:99465401 chr15:99465401 synonymous SNV . 0 21 hPsi_associated_SNPs_104440 0 0 1 0 1 Endoplasmic reticulum 0 0.438718592994891 0.937288522720336 0 hPsi_site_3400 iPseU_CNN:0.937288522720336;iRNA_PseU:0 3401 chr2 201768234 201768234 1 + G A rs569758765 201768234 - 201768214 201768254 41 GGAAGCAGCATCCAAAGTATCATGATGGGACATCTCACCTA GGAAGCAGCATCCAAAGTATTATGATGGGACATCTCACCTA Direct Gain 0 0.958210906898623 0 0.999993801116943 prediction 0.916421813797245 Functional Gain - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201768234 chr2:201768234 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_104441 0 0 0 0 0 Ribosome 0 0.438718495349004 0.999987602233886 0 hPsi_site_3401 iPseU_CNN:0.999987602233886;iRNA_PseU:0 3402 chr1 179380363 179380363 1 + G T COAD 179380363 + 179380343 179380383 41 AAAAGTTAGTGGCAGAAAGAGATATCTGGAGCTCAGCCACA AAAAGTTAGTGGCAGAAAGATATATCTGGAGCTCAGCCACA Direct Gain 0 0.958207297846102 0 0.999009966850281 prediction 0.916414595692204 Functional Gain - AXDND1 ENSG00000162779 CDS Human protein_coding chr1:179380363 chr1:179380363 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_104442 0 0 0 1 2 cytosol 0 0.438672062303975 0.998019933700562 0 hPsi_site_3402 iPseU_CNN:0.998019933700562;iRNA_PseU:0 3403 chr11 55563055 55563055 1 + G A BRCA 55563055 - 55563035 55563075 41 GCAAAGGTGGGCTCCATGCTCAGATTCCTTAAAACCATCAT GCAAAGGTGGGCTCCATGCTTAGATTCCTTAAAACCATCAT Direct Gain 0 0.958200222943633 0 0.999981880187988 prediction 0.916400445887266 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563055 chr11:55563055 synonymous SNV . 0 21 hPsi_associated_SNPs_104443 0 0 0 0 0 unknown 0 0.438712838892885 0.999963760375976 0 hPsi_site_3403 iPseU_CNN:0.999963760375976;iRNA_PseU:0 3404 chr9 90500166 90500166 1 + C T LUSC 90500166 + 90500146 90500186 41 GCATGGTCCCCTGGCCTCCTCTCCACCTCCACCCGACTCCA GCATGGTCCCCTGGCCTCCTTTCCACCTCCACCCGACTCCA Direct Gain 0 0.958198796858284 0 0.996984124183655 prediction 0.916397593716567 Functional Gain - SPATA31E1 ENSG00000177992 CDS Human protein_coding chr9:90500166 chr9:90500166 nonsynonymous SNV 0.151 2 21 hPsi_associated_SNPs_104444 0 0 0 0 0 exosome 0 0.438718585533952 0.99396824836731 0 hPsi_site_3404 iPseU_CNN:0.99396824836731;iRNA_PseU:0 3405 chr11 124016740 124016740 1 + A T rs9326269 124016740 + 124016720 124016760 41 GTGATGATGTGTTCTTGTGTATTATAACTCTTTATTTTTTG GTGATGATGTGTTCTTGTGTTTTATAACTCTTTATTTTTTG Direct Gain 0 0.958198770463349 0 0.932829856872559 prediction 0.916397540926698 Functional Gain - VWA5A ENSG00000110002 UTR3 Human protein_coding chr11:124016740 chr11:124016740 . . 0 21 hPsi_associated_SNPs_104445 0 0 0 3 0 nucleus 0 0.43871922963591 0.865659713745118 0 hPsi_site_3405 iPseU_CNN:0.865659713745118;iRNA_PseU:0 3406 chr8 19677121 19677121 1 + G T UCEC 19677121 + 19677101 19677141 41 ACCAGCCGGTGGTGTGGAGAGAAATCAGCATTATTACATCA ACCAGCCGGTGGTGTGGAGATAAATCAGCATTATTACATCA Direct Gain 0 0.958194044152077 0 0.996531128883362 prediction 0.916388088304155 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677121 chr8:19677121 stopgain 1.000 0 21 hPsi_associated_SNPs_104446 0 0 1 0 2 Cytosol 0 0.439668852312041 0.993062257766724 0 hPsi_site_3406 iPseU_CNN:0.993062257766724;iRNA_PseU:0 3407 chr1 225428443 225428443 1 + C T KICH 225428443 + 225428423 225428463 41 ATATACCATTTTGTCCCAGTCTTGAACCTGATTCTCTTGCA ATATACCATTTTGTCCCAGTTTTGAACCTGATTCTCTTGCA Direct Gain 0 0.958189027991758 0 0.829931497573853 prediction 0.916378055983516 Functional Gain - DNAH14 ENSG00000185842 CDS Human protein_coding chr1:225428443 chr1:225428443 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104447 0 0 1 0 1 Cytosol 0 0.438712394005311 0.659862995147706 0 hPsi_site_3407 iPseU_CNN:0.659862995147706;iRNA_PseU:0 3408 chr20 60776031 60776031 1 + G A HNSC 60776031 - 60776011 60776051 41 TGCTCCAGGTTCTCGCCGGTCAACGCCGACAGCACGATGAC TGCTCCAGGTTCTCGCCGGTTAACGCCGACAGCACGATGAC Direct Gain 0 0.958188440802801 0 0.999994099140167 prediction 0.916376881605601 Functional Gain - MTG2 ENSG00000101181 CDS Human protein_coding chr20:60776031 chr20:60776031 synonymous SNV . 0 21 hPsi_associated_SNPs_104448 0 0 0 0 0 Ribosome 0 0.441476528324511 0.999988198280334 0 hPsi_site_3408 iPseU_CNN:0.999988198280334;iRNA_PseU:0 3409 chr11 73101855 73101855 1 + C T COAD 73101855 + 73101835 73101875 41 CCCAGGCACCTTCTCAGCTGCATGGGGCTCCAGCCCATGCC CCCAGGCACCTTCTCAGCTGTATGGGGCTCCAGCCCATGCC Direct Gain 0 0.958186780855995 0 0.936186015605927 prediction 0.916373561711989 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73101855 chr11:73101855 nonsynonymous SNV 0.499 1 21 hPsi_associated_SNPs_104449 0 0 1 0 0 chromatin 0 0.438718592783389 0.872372031211854 0 hPsi_site_3409 iPseU_CNN:0.872372031211854;iRNA_PseU:0 3410 chr12 7051773 7051773 1 + G A rs188502263 7051773 - 7051753 7051793 41 ATCCACCCGCGTCTCACAGGCATAAGCCACAGAGCCCAGAC ATCCACCCGCGTCTCACAGGTATAAGCCACAGAGCCCAGAC Direct Gain 0 0.958181882799339 0 0.99871426820755 prediction 0.916363765598679 Functional Gain - C12orf57;ATN1 ENSG00000111678;ENSG00000111676;ENSG00000272173 upstream;downstream Human other chr12:7051773 chr12:7051773 . . 0 21 hPsi_associated_SNPs_104450 0 0 0 0 0 unknown 0 0.438729743167494 0.9974285364151 0 hPsi_site_3410 iPseU_CNN:0.9974285364151;iRNA_PseU:0 3411 chr1 248343991 248343991 1 + G A rs142589543 248343991 - 248343971 248344011 41 AACAGGTCGTGAAAGCTTTGCAACGACCCTCTCCAGATCCC AACAGGTCGTGAAAGCTTTGTAACGACCCTCTCCAGATCCC Direct Gain 0 0.958179958090962 0 0.8804532289505 prediction 0.916359916181924 Functional Gain - OR2M2 ENSG00000198601 CDS Human protein_coding chr1:248343991 chr1:248343991 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_104451 0 0 0 0 0 exosome 0 0.438719548901299 0.760906457901 0 hPsi_site_3411 iPseU_CNN:0.760906457901;iRNA_PseU:0 3412 chr16 88594612 88594612 1 + G T UCEC 88594612 + 88594592 88594632 41 CTCCTGCCCCAGCAGGCCGGGATGGCCTCCATCCTTGCCAC CTCCTGCCCCAGCAGGCCGGTATGGCCTCCATCCTTGCCAC Direct Gain 0 0.958178246608998 0 0.983053207397461 prediction 0.916356493217996 Functional Gain - ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88594612 chr16:88594612 synonymous SNV . 0 21 hPsi_associated_SNPs_104452 0 0 1 0 1 chromatin 0 0.442147305629372 0.966106414794922 0 hPsi_site_3412 iPseU_CNN:0.966106414794922;iRNA_PseU:0 3413 chr2 217528736 217528736 1 + G T LUSC 217528736 + 217528716 217528756 41 CACCGGGAAGCTGATCCAGGGAGCCCCCACCATCCGGGGGG CACCGGGAAGCTGATCCAGGTAGCCCCCACCATCCGGGGGG Direct Gain 0 0.958176381024725 0 0.999828696250916 prediction 0.91635276204945 Functional Gain - IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217528736 chr2:217528736 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_104453 0 0 1 0 1 Endoplasmic reticulum 0 0.43873224550504 0.999657392501832 0 hPsi_site_3413 iPseU_CNN:0.999657392501832;iRNA_PseU:0 3414 chr7 63537838 63537838 1 + G T UCEC 63537838 + 63537818 63537858 41 AATGGCATTCATCAATGTTTGTCAGCTACCCGTAGCAAAAC AATGGCATTCATCAATGTTTTTCAGCTACCCGTAGCAAAAC Direct Gain 0 0.958169081537002 0 0.0479259192943573 prediction 0.916338163074003 Functional Gain - ZNF727 ENSG00000257482 CDS Human other chr7:63537838 chr7:63537838 nonsynonymous SNV 0.029 0 21 hPsi_associated_SNPs_104454 0 0 0 0 0 exosome 0 0.441002277126895 0 0 hPsi_site_3414 iPseU_CNN:0;iRNA_PseU:0 3415 chr13 99853036 99853036 1 + C T rs527978131 99853036 + 99853016 99853056 41 GCGCCGGGTGCGCCGTTCGTCAGCGGCGAGTGGCCTCGCGG GCGCCGGGTGCGCCGTTCGTTAGCGGCGAGTGGCCTCGCGG Direct Gain 0 0.95816565128398 0 0.999999761581421 prediction 0.91633130256796 Functional Gain - UBAC2 ENSG00000134882 UTR5 Human protein_coding chr13:99853036 chr13:99853036 . . 0 21 hPsi_associated_SNPs_104455 0 0 0 0 0 Endoplasmic reticulum 0 0.438683105835636 0.999999523162842 0 hPsi_site_3415 iPseU_CNN:0.999999523162842;iRNA_PseU:0 3416 chr11 59245634 59245634 1 + C A UCEC 59245634 - 59245614 59245654 41 AAATGCAGGGTCACCACAGTGATGTGGGAGGTGCAGGTGGA AAATGCAGGGTCACCACAGTTATGTGGGAGGTGCAGGTGGA Direct Gain 0 0.958161708090314 0 0.926778078079224 prediction 0.916323416180628 Functional Gain - OR4D10 ENSG00000254466 CDS Human protein_coding chr11:59245634 chr11:59245634 synonymous SNV . 0 21 hPsi_associated_SNPs_104456 0 0 0 0 0 unknown 0 0.438837085060195 0.853556156158448 0 hPsi_site_3416 iPseU_CNN:0.853556156158448;iRNA_PseU:0 3417 chr5 61923025 61923025 1 + C T SKCM 61923025 + 61923005 61923045 41 ACAGTGTCACTGCAGCAGTTCATCTACGAGAAGCTCAAGGC ACAGTGTCACTGCAGCAGTTTATCTACGAGAAGCTCAAGGC Direct Gain 0 0.958160550415486 0 0.999358654022217 prediction 0.916321100830972 Functional Gain - IPO11 ENSG00000086200 CDS Human protein_coding chr5:61923025 chr5:61923025 synonymous SNV . 0 21 hPsi_associated_SNPs_104457 0 0 1 0 1 Ribosome 0 0.438693348485747 0.998717308044434 0 hPsi_site_3417 iPseU_CNN:0.998717308044434;iRNA_PseU:0 3418 chr2 44508567 44508567 1 + G T UCEC 44508567 + 44508547 44508587 41 TCATACCAAACCACACGAGTGATAAACATATTTGGTTTCAA TCATACCAAACCACACGAGTTATAAACATATTTGGTTTCAA Direct Gain 0 0.958154946932106 0 0.980513095855713 prediction 0.916309893864212 Functional Gain - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44508567 chr2:44508567 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_104458 0 0 0 0 1 exosome 0 0.438718576817982 0.961026191711426 0 hPsi_site_3418 iPseU_CNN:0.961026191711426;iRNA_PseU:0 3419 chr17 55187513 55187513 1 + G A UCEC 55187513 - 55187493 55187533 41 GACTCCGCCCCTACCTTTGGCACCTCGATCTCCCAGATGAT GACTCCGCCCCTACCTTTGGTACCTCGATCTCCCAGATGAT Direct Gain 0 0.958152588545786 0 0.48363333940506 prediction 0.916305177091571 Functional Gain - AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55187513 chr17:55187513 synonymous SNV . 0 21 hPsi_associated_SNPs_104459 0 0 0 0 0 Endoplasmic reticulum 0 0.438643405973174 0 0 hPsi_site_3419 iPseU_CNN:0;iRNA_PseU:0 3420 chr1 39845990 39845990 1 + G A UCEC 39845990 - 39845970 39846010 41 TCCTGTGAGTTGGGATATGTCACCAGTAATCCAGCCAGGGC TCCTGTGAGTTGGGATATGTTACCAGTAATCCAGCCAGGGC Direct Gain 0 0.958137562841904 0 0.391755074262619 prediction 0.916275125683807 Functional Gain - MACF1 ENSG00000127603 CDS Human protein_coding chr1:39845990 chr1:39845990 synonymous SNV . 0 21 hPsi_associated_SNPs_104460 0 0 0 0 0 Endoplasmic reticulum 0 0.437281339178147 0 0 hPsi_site_3420 iPseU_CNN:0;iRNA_PseU:0 3421 chr22 45127628 45127628 1 + C T rs547180222 45127628 + 45127608 45127648 41 AGGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGGGACT AGGACAGAAGCTGCTGGACTTACTGGCAGAGACCTGGGACT Direct Gain 0 0.958133153268973 0 0.997692108154297 prediction 0.916266306537946 Functional Gain - PRR5 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45127628 chr22:45127628 nonsynonymous SNV 0.920 2 21 hPsi_associated_SNPs_104461 0 0 1 0 2 Cytosol 0 0.438940143230217 0.995384216308594 0 hPsi_site_3421 iPseU_CNN:0.995384216308594;iRNA_PseU:0 3422 chr1 248402591 248402591 1 + G A LAML 248402591 - 248402571 248402611 41 ACATATAGCCACATAGCGGTCATAAGCCATGACAGCCAACA ACATATAGCCACATAGCGGTTATAAGCCATGACAGCCAACA Direct Gain 0 0.958129634236517 0 0.997925400733948 prediction 0.916259268473035 Functional Gain - OR2M4 ENSG00000171180 CDS Human protein_coding chr1:248402591 chr1:248402591 nonsynonymous SNV 0.020 4 21 hPsi_associated_SNPs_104462 0 0 0 0 0 exosome 0 0.438745569810194 0.995850801467896 0 hPsi_site_3422 iPseU_CNN:0.995850801467896;iRNA_PseU:0 3423 chr7 48684278 48684278 1 + C T SARC 48684278 + 48684258 48684298 41 GGATGCCTAGCTGACTTGTTCAAAGTTATAGAGAACAATAA GGATGCCTAGCTGACTTGTTTAAAGTTATAGAGAACAATAA Direct Gain 0 0.958128150405894 0 0.570249974727631 prediction 0.916256300811789 Functional Gain - ABCA13 ENSG00000179869 CDS Human protein_coding chr7:48684278 chr7:48684278 synonymous SNV . 0 21 hPsi_associated_SNPs_104463 0 0 0 0 1 Nucleus 0 0.438718638410497 0.140499949455262 0 hPsi_site_3423 iPseU_CNN:0.140499949455262;iRNA_PseU:0 3424 chr7 92905500 92905500 1 + G A LUSC 92905500 - 92905480 92905520 41 TGAATGGCTTGGGTGAAGTGCATATGAAGTTGATCCATTGC TGAATGGCTTGGGTGAAGTGTATATGAAGTTGATCCATTGC Direct Gain 0 0.958127603233172 0 0.74497127532959 prediction 0.916255206466343 Functional Gain - VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905500 chr7:92905500 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104464 0 0 0 0 0 Cytosol 0 0.438858889990528 0.48994255065918 0 hPsi_site_3424 iPseU_CNN:0.48994255065918;iRNA_PseU:0 3425 chr2 201464399 201464399 1 + G A LUAD 201464399 - 201464379 201464419 41 AGCAGCGTGTAGATGGACATCACCATCCCAGGTGTGCAGAA AGCAGCGTGTAGATGGACATTACCATCCCAGGTGTGCAGAA Direct Gain 0 0.958119447943868 0 0.9999960064888 prediction 0.916238895887736 Functional Gain - AOX1 ENSG00000138356 CDS Human protein_coding chr2:201464399 chr2:201464399 synonymous SNV . 0 21 hPsi_associated_SNPs_104465 0 0 0 0 0 Endoplasmic reticulum 0 0.438104396790701 0.9999920129776 0 hPsi_site_3425 iPseU_CNN:0.9999920129776;iRNA_PseU:0 3426 chr5 164028113 164028113 1 + C A OV 164028113 - 164028093 164028133 41 GTGGAGATCAAGCTGGAGATGATCGGCCACGACCTGGGCGA GTGGAGATCAAGCTGGAGATTATCGGCCACGACCTGGGCGA Direct Gain 0 0.958106379990611 0 0.999992549419403 prediction 0.916212759981221 Functional Gain - LOC102546299;NONE ENSG00000241956;ENSG00000253600 ncRNA_exonic Human other chr5:164028113 chr5:164028113 . . 0 21 hPsi_associated_SNPs_104466 0 0 0 0 0 unknown 0 0.438718103604616 0.999985098838806 0 hPsi_site_3426 iPseU_CNN:0.999985098838806;iRNA_PseU:0 3427 chr8 94935181 94935181 1 + G A COAD 94935181 - 94935161 94935201 41 CATGAGCCGTCCTCTTCCTGCACACCCAGCATGGCTCTGCT CATGAGCCGTCCTCTTCCTGTACACCCAGCATGGCTCTGCT Direct Gain 0 0.958105722663837 0 0.999799728393555 prediction 0.916211445327673 Functional Gain - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935181 chr8:94935181 synonymous SNV . 0 21 hPsi_associated_SNPs_104467 0 0 0 0 0 Ribosome 0 0.438835548105953 0.99959945678711 0 hPsi_site_3427 iPseU_CNN:0.99959945678711;iRNA_PseU:0 3428 chrX 16737924 16737924 1 + C T rs11553381 16737924 + 16737904 16737944 41 GCAGCCCAATGGAGATGCTCCACCCGAGCAGCCGTCCGAGA GCAGCCCAATGGAGATGCTCTACCCGAGCAGCCGTCCGAGA Direct Gain 0 0.958102671125307 0 0.989485859870911 prediction 0.916205342250614 Functional Gain - SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16737924 chrX:16737924 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104468 0 0 1 0 1 Ribosome 0 0.438718387647539 0.978971719741822 0 hPsi_site_3428 iPseU_CNN:0.978971719741822;iRNA_PseU:0 3429 chr5 148695474 148695474 1 + C A COAD 148695474 - 148695454 148695494 41 CCCCCAGAGGCTCCTACCGTGATCACAGGTCTCCCGGCGGC CCCCCAGAGGCTCCTACCGTTATCACAGGTCTCCCGGCGGC Direct Gain 0 0.958092697007585 0 0.999950766563416 prediction 0.916185394015171 Functional Gain - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148695474 chr5:148695474 nonsynonymous SNV 0.446 0 21 hPsi_associated_SNPs_104469 0 0 0 0 0 exosome 0 0.438726051644003 0.999901533126832 0 hPsi_site_3429 iPseU_CNN:0.999901533126832;iRNA_PseU:0 3430 chr16 26147059 26147059 1 + G T LUSC 26147059 + 26147039 26147079 41 ATCAAACTGATTGTGGTGGTGAGAAACCCCGTGACCAGGGC ATCAAACTGATTGTGGTGGTTAGAAACCCCGTGACCAGGGC Direct Gain 0 0.958086583352917 0 0.999674618244171 prediction 0.916173166705834 Functional Gain - HS3ST4 ENSG00000182601 CDS Human protein_coding chr16:26147059 chr16:26147059 synonymous SNV . 0 21 hPsi_associated_SNPs_104470 0 0 0 0 0 exosome 0 0.438712617540349 0.999349236488342 0 hPsi_site_3430 iPseU_CNN:0.999349236488342;iRNA_PseU:0 3431 chr18 51818283 51818283 1 + C T SKCM 51818283 + 51818263 51818303 41 TGAATGTGAAGATGCCATTTCACCTTACCCTTCTAAGTGTG TGAATGTGAAGATGCCATTTTACCTTACCCTTCTAAGTGTG Direct Gain 0 0.958083772888332 0 0.601474642753601 prediction 0.916167545776664 Functional Gain - POLI ENSG00000101751 CDS Human protein_coding chr18:51818283 chr18:51818283 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_104471 0 0 1 0 1 Nucleus 0 0.438718656326136 0.202949285507202 0 hPsi_site_3431 iPseU_CNN:0.202949285507202;iRNA_PseU:0 3432 chr12 108086816 108086816 1 + G T UCEC 108086816 + 108086796 108086836 41 ATTTCTTGATTAAGCCCAGTGATAATCTTATAGTTTGTGGC ATTTCTTGATTAAGCCCAGTTATAATCTTATAGTTTGTGGC Direct Gain 0 0.958083615824302 0 0.954123616218567 prediction 0.916167231648605 Functional Gain - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086816 chr12:108086816 nonsynonymous SNV 0.843 4 21 hPsi_associated_SNPs_104472 0 0 1 0 3 Ribosome 0 0.445037339663643 0.908247232437134 0 hPsi_site_3432 iPseU_CNN:0.908247232437134;iRNA_PseU:0 3433 chr1 26759441 26759441 1 + C A UCEC 26759441 - 26759421 26759461 41 GCTCTCCTTCCTTGATCCATGACATAGTTCTTTTCCAGTCA GCTCTCCTTCCTTGATCCATTACATAGTTCTTTTCCAGTCA Direct Gain 0 0.958080081606753 0 0.997174978256226 prediction 0.916160163213505 Functional Gain - DHDDS ENSG00000117682 CDS Human protein_coding chr1:26759441 chr1:26759441 stopgain 1.000 1 21 hPsi_associated_SNPs_104473 0 0 0 0 0 chromatin 0 0.438722306752356 0.994349956512452 0 hPsi_site_3433 iPseU_CNN:0.994349956512452;iRNA_PseU:0 3434 chr16 57416922 57416922 1 + C T BLCA 57416922 + 57416902 57416942 41 CCGGAGCTGTGGTAGTAATTCATATGTCCTGGTGCCCGTGT CCGGAGCTGTGGTAGTAATTTATATGTCCTGGTGCCCGTGT Direct Gain 0 0.958077728706111 0 0.929404199123383 prediction 0.916155457412221 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416922 chr16:57416922 nonsynonymous SNV 0.719 3 21 hPsi_associated_SNPs_104474 0 0 0 0 0 nucleus 0 0.43871907685398 0.858808398246766 0 hPsi_site_3434 iPseU_CNN:0.858808398246766;iRNA_PseU:0 3435 chr8 98900408 98900408 1 + C T LUAD 98900408 + 98900388 98900428 41 TGCCGAGGCCAGGGAGCGGTCACGTGGGAGGTCCATCTCTA TGCCGAGGCCAGGGAGCGGTTACGTGGGAGGTCCATCTCTA Direct Gain 0 0.958076121462035 0 0.999962687492371 prediction 0.916152242924071 Functional Gain - MATN2 ENSG00000132561 CDS Human protein_coding chr8:98900408 chr8:98900408 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_104475 0 0 0 0 1 Cytosol 0 0.438718184495156 0.999925374984742 0 hPsi_site_3435 iPseU_CNN:0.999925374984742;iRNA_PseU:0 3436 chr1 214170119 214170119 1 + G A HNSC 214170119 - 214170099 214170139 41 AAAAGGCATCATGGCATCTTCATACGAGTTCGCCCTCTTCA AAAAGGCATCATGGCATCTTTATACGAGTTCGCCCTCTTCA Direct Gain 0 0.95807444263128 0 0.976716995239258 prediction 0.916148885262561 Functional Gain - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214170119 chr1:214170119 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104476 0 0 0 0 0 cytosol 0 0.438802659273686 0.953433990478516 0 hPsi_site_3436 iPseU_CNN:0.953433990478516;iRNA_PseU:0 3437 chr12 40707860 40707860 1 + G A STAD 40707860 - 40707840 40707880 41 ATTACGGGAAATTCAATTGGCACATTTTTACGCTCCGATAA ATTACGGGAAATTCAATTGGTACATTTTTACGCTCCGATAA Direct Gain 0 0.958066151613437 0 0.995675563812256 prediction 0.916132303226874 Functional Gain - LRRK2 ENSG00000188906 CDS Human protein_coding chr12:40707860 chr12:40707860 synonymous SNV . 0 21 hPsi_associated_SNPs_104477 0 0 0 0 0 exosome 0 0.438718483134897 0.991351127624512 0 hPsi_site_3437 iPseU_CNN:0.991351127624512;iRNA_PseU:0 3438 chr11 65988247 65988247 1 + C T KIRC 65988247 + 65988227 65988267 41 AGAAAGCATCCTCAGCACGCCAAAGCCCAAGCTCAAGTGAG AGAAAGCATCCTCAGCACGCTAAAGCCCAAGCTCAAGTGAG Direct Gain 0 0.958064458833518 0 0.999983847141266 prediction 0.916128917667035 Functional Gain - PACS1 ENSG00000175115 CDS Human protein_coding chr11:65988247 chr11:65988247 nonsynonymous SNV 0.357 2 21 hPsi_associated_SNPs_104478 0 0 1 0 1 Cytosol 0 0.438720585502673 0.999967694282532 0 hPsi_site_3438 iPseU_CNN:0.999967694282532;iRNA_PseU:0 3439 chr4 87705639 87705639 1 + G A HNSC 87705639 - 87705619 87705659 41 TCCTTTGGGGTACGATATTTCATTTATTTCTTCCCCAGCAA TCCTTTGGGGTACGATATTTTATTTATTTCTTCCCCAGCAA Direct Gain 0 0.958061284432425 0 0.0362292528152466 prediction 0.916122568864849 Functional Gain - PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87705639 chr4:87705639 nonsynonymous SNV 0.156 0 21 hPsi_associated_SNPs_104479 0 0 0 0 0 Ribosome 0 0.438718592938939 0 0 hPsi_site_3439 iPseU_CNN:0;iRNA_PseU:0 3440 chr19 15052906 15052906 1 + G A SKCM 15052906 - 15052886 15052926 41 AAAACACCCAGGACAATGGTCACAAAATACATCACGATGTT AAAACACCCAGGACAATGGTTACAAAATACATCACGATGTT Direct Gain 0 0.958051180960251 0 0.999669671058655 prediction 0.916102361920502 Functional Gain - OR7C2 ENSG00000127529 CDS Human protein_coding chr19:15052906 chr19:15052906 synonymous SNV . 0 21 hPsi_associated_SNPs_104480 0 0 0 0 0 exosome 0 0.438719670212013 0.99933934211731 0 hPsi_site_3440 iPseU_CNN:0.99933934211731;iRNA_PseU:0 3441 chr17 57289153 57289153 1 + C A UCEC 57289153 - 57289133 57289173 41 ACCTGATTTAGGTAATGAGTGAAATTTGTGCACACAGTGTT ACCTGATTTAGGTAATGAGTTAAATTTGTGCACACAGTGTT Direct Gain 0 0.958050353661335 0 0.999968707561493 prediction 0.91610070732267 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57289153 chr17:57289153 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104481 0 0 0 0 0 chromatin 0 0.438724850013265 0.999937415122986 0 hPsi_site_3441 iPseU_CNN:0.999937415122986;iRNA_PseU:0 3442 chrX 49028440 49028440 1 + G T UCEC 49028440 + 49028420 49028460 41 GGAATCCTCCTGTTTGCTGAGATTGTGAGCGTTCTGGGGCA GGAATCCTCCTGTTTGCTGATATTGTGAGCGTTCTGGGGCA Direct Gain 0 0.958034164716485 0 0.965075194835663 prediction 0.916068329432971 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49028440 chrX:49028440 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104482 0 0 0 0 1 Ribosome 0 0.438878311610583 0.930150389671326 0 hPsi_site_3442 iPseU_CNN:0.930150389671326;iRNA_PseU:0 3443 chr6 148848629 148848629 1 + C T COAD 148848629 + 148848609 148848649 41 GTACAAAGAAGTCATCAAATCACCTACTGCCTCTCGCATCT GTACAAAGAAGTCATCAAATTACCTACTGCCTCTCGCATCT Direct Gain 0 0.958030514261664 0 0.281744569540024 prediction 0.916061028523327 Functional Gain - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148848629 chr6:148848629 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_104483 0 0 0 0 0 Cytosol 0 0.438710962570074 0 0 hPsi_site_3443 iPseU_CNN:0;iRNA_PseU:0 3444 chr10 7772013 7772013 1 + G A BLCA 7772013 - 7771993 7772033 41 GGACAGTCTCTTCAAAAAATCATAGTCCACATCAAATCCCA GGACAGTCTCTTCAAAAAATTATAGTCCACATCAAATCCCA Direct Gain 0 0.958030343715216 0 0.999986171722412 prediction 0.916060687430431 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7772013 chr10:7772013 nonsynonymous SNV 0.823 4 21 hPsi_associated_SNPs_104484 0 0 0 0 0 cytosol 0 0.438718489484929 0.999972343444824 0 hPsi_site_3444 iPseU_CNN:0.999972343444824;iRNA_PseU:0 3445 chr2 29274760 29274760 1 + G A UCEC 29274760 - 29274740 29274780 41 GGAGGCTCCTGGACAGCCGGCACACCACCCCGCGGATGTTC GGAGGCTCCTGGACAGCCGGTACACCACCCCGCGGATGTTC Direct Gain 0 0.958028796144468 0 0.999995172023773 prediction 0.916057592288935 Functional Gain - TOGARAM2 ENSG00000189350 CDS Human protein_coding chr2:29274760 chr2:29274760 nonsynonymous SNV 0.033 1 21 hPsi_associated_SNPs_104485 0 0 0 0 0 unknown 0 0.4387202534515 0.999990344047546 0 hPsi_site_3445 iPseU_CNN:0.999990344047546;iRNA_PseU:0 3446 chr14 70925420 70925420 1 + G T COAD 70925420 + 70925400 70925440 41 ATAATCCTCCAAGATTGGGGGAAATCTTTATGCTAAAGCGC ATAATCCTCCAAGATTGGGGTAAATCTTTATGCTAAAGCGC Direct Gain 0 0.958025065451836 0 0.386678516864777 prediction 0.916050130903671 Functional Gain - ADAM21 ENSG00000139985 CDS Human protein_coding chr14:70925420 chr14:70925420 stopgain 0.027 0 21 hPsi_associated_SNPs_104486 0 0 0 0 0 exosome 0 0.43871936254926 0 0 hPsi_site_3446 iPseU_CNN:0;iRNA_PseU:0 3447 chr16 29818106 29818106 1 + G T BLCA 29818106 + 29818086 29818126 41 CGGGGGGTGGGCGGCCTCATGAACTCCTTCCCGCCACCTCA CGGGGGGTGGGCGGCCTCATTAACTCCTTCCCGCCACCTCA Direct Gain 0 0.958003897658047 0 0.999561488628387 prediction 0.916007795316093 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29818106 chr16:29818106 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_104487 0 0 1 0 0 Cytosol 0 0.43871834613645 0.999122977256774 0 hPsi_site_3447 iPseU_CNN:0.999122977256774;iRNA_PseU:0 3448 chr6 54191636 54191636 1 + G A LIHC 54191636 - 54191616 54191656 41 TTAAAACCATCTTCTAAAGTCATTCCCCAAAATTGGCTGTA TTAAAACCATCTTCTAAAGTTATTCCCCAAAATTGGCTGTA Direct Gain 0 0.957997573125097 0 0.980579912662506 prediction 0.915995146250195 Functional Gain - TINAG ENSG00000137251 CDS Human protein_coding chr6:54191636 chr6:54191636 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104488 0 0 0 0 0 exosome 0 0.438718545932819 0.961159825325012 0 hPsi_site_3448 iPseU_CNN:0.961159825325012;iRNA_PseU:0 3449 chr12 1005583 1005583 1 + C T BLCA 1005583 + 1005563 1005603 41 AAAGAAAGAAGGACCAGTGGCATCTCCTCCTTTTATGGATT AAAGAAAGAAGGACCAGTGGTATCTCCTCCTTTTATGGATT Direct Gain 0 0.957996995261902 0 0.994382500648499 prediction 0.915993990523805 Functional Gain - WNK1 ENSG00000060237 CDS Human protein_coding chr12:1005583 chr12:1005583 nonsynonymous SNV 0.513 0 21 hPsi_associated_SNPs_104489 0 0 1 0 0 Ribosome 0 0.438718591479481 0.988765001296998 0 hPsi_site_3449 iPseU_CNN:0.988765001296998;iRNA_PseU:0 3450 chr16 14027015 14027015 1 + G T rs3136132 14027015 + 14026995 14027035 41 TGAGCCCAGGAGTTGAAGGTGACACCAAGATATGATCACAC TGAGCCCAGGAGTTGAAGGTTACACCAAGATATGATCACAC Direct Gain 0 0.957978500823732 0 0.976707458496094 prediction 0.915957001647463 Functional Gain - ERCC4 ENSG00000262732 ncRNA_exonic Human antisense chr16:14027015 chr16:14027015 . . 0 21 hPsi_associated_SNPs_104490 0 0 0 0 0 Nucleus 0 0.441309371531871 0.953414916992188 0 hPsi_site_3450 iPseU_CNN:0.953414916992188;iRNA_PseU:0 3451 chr7 148981252 148981252 1 + G A rs146936057 148981252 - 148981232 148981272 41 GGGTCCCATCACTCCAGCTTCAGAGTCACCCACACCAAGGC GGGTCCCATCACTCCAGCTTTAGAGTCACCCACACCAAGGC Direct Gain 0 0.957977439671753 0 0.999757170677185 prediction 0.915954879343506 Functional Gain - ZNF783 ENSG00000204946 UTR3 Human protein_coding chr7:148981252 chr7:148981252 . . 0 21 hPsi_associated_SNPs_104491 0 0 0 0 0 chromatin 0 0.438718576785693 0.99951434135437 0 hPsi_site_3451 iPseU_CNN:0.99951434135437;iRNA_PseU:0 3452 chr6 144820449 144820449 1 + G A BLCA 144820449 - 144820429 144820469 41 GAGAGAGAAGCAGCCTCTTTCTTCATTTTCCGGGCCAACTG GAGAGAGAAGCAGCCTCTTTTTTCATTTTCCGGGCCAACTG Direct Gain 0 0.957975220530581 0 0.971962809562683 prediction 0.915950441061161 Functional Gain - UTRN ENSG00000152818 CDS Human protein_coding chr6:144820449 chr6:144820449 synonymous SNV . 0 21 hPsi_associated_SNPs_104492 0 0 0 0 0 Nucleus 0 0.438718139725646 0.943925619125366 0 hPsi_site_3452 iPseU_CNN:0.943925619125366;iRNA_PseU:0 3453 chr17 74878337 74878337 1 + G T LUAD 74878337 + 74878317 74878357 41 CCAGGCTGGAGAACAGCAGTGAGCTGCACCGGGCCGGCGGC CCAGGCTGGAGAACAGCAGTTAGCTGCACCGGGCCGGCGGC Direct Gain 0 0.957974712389436 0 0.30777183175087 prediction 0.915949424778873 Functional Gain - MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74878337 chr17:74878337 stopgain 0.579 0 21 hPsi_associated_SNPs_104493 0 0 1 0 1 exosome 0 0.438541919830322 0 0 hPsi_site_3453 iPseU_CNN:0;iRNA_PseU:0 3454 chr11 64695312 64695312 1 + G A BLCA 64695312 - 64695292 64695332 41 TCAGGGTCAAATTCAGGGTTCTCACTGGGCGGCAGAGTCCG TCAGGGTCAAATTCAGGGTTTTCACTGGGCGGCAGAGTCCG Direct Gain 0 0.957970859356724 0 0.987070262432098 prediction 0.915941718713449 Functional Gain - PPP2R5B ENSG00000068971 CDS Human protein_coding chr11:64695312 chr11:64695312 synonymous SNV . 0 21 hPsi_associated_SNPs_104494 0 0 0 0 0 Ribosome 0 0.438718590487637 0.974140524864196 0 hPsi_site_3454 iPseU_CNN:0.974140524864196;iRNA_PseU:0 3455 chr18 19095480 19095480 1 + C T READ 19095480 + 19095460 19095500 41 GTCCACTATGCAATCTTGGGCATACAGAAATGGAGCAGCAA GTCCACTATGCAATCTTGGGTATACAGAAATGGAGCAGCAA Direct Gain 0 0.957970467045724 0 0.00295603275299072 prediction 0.915940934091447 Functional Gain - GREB1L ENSG00000141449 CDS Human protein_coding chr18:19095480 chr18:19095480 synonymous SNV . 0 21 hPsi_associated_SNPs_104495 0 0 0 0 0 Nucleus 0 0.438692839382015 0 0 hPsi_site_3455 iPseU_CNN:0;iRNA_PseU:0 3456 chr2 162760646 162760646 1 + C A rs61748242 162760646 - 162760626 162760666 41 CCCAGCAGTCCTCCAAACGTGATGACAGGAGACATACACGC CCCAGCAGTCCTCCAAACGTTATGACAGGAGACATACACGC Direct Gain 0 0.957968733789539 0 0.986329615116119 prediction 0.915937467579077 Functional Gain - SLC4A10 ENSG00000144290 CDS Human protein_coding chr2:162760646 chr2:162760646 synonymous SNV . 0 21 hPsi_associated_SNPs_104496 0 0 0 0 0 exosome 0 0.439114560978284 0.972659230232238 0 hPsi_site_3456 iPseU_CNN:0.972659230232238;iRNA_PseU:0 3457 chr15 74287083 74287083 1 + C T rs566938076 74287083 + 74287063 74287103 41 AGGGACTCAGCCAACTGGCTCACGCCTCCCCTTCAGCTTCT AGGGACTCAGCCAACTGGCTTACGCCTCCCCTTCAGCTTCT Direct Gain 0 0.957967527463699 0 0.942602694034576 prediction 0.915935054927397 Functional Gain - PML ENSG00000140464 UTR5 Human protein_coding chr15:74287083 chr15:74287083 . . 0 21 hPsi_associated_SNPs_104497 0 0 1 0 0 Cytosol 0 0.438458938205867 0.885205388069152 0 hPsi_site_3457 iPseU_CNN:0.885205388069152;iRNA_PseU:0 3458 chr11 65266466 65266466 1 + G T LUSC 65266466 + 65266446 65266486 41 GAAGGTGATCGAATTCCGGTGATGCGAGTTGTTCTCCGTCT GAAGGTGATCGAATTCCGGTTATGCGAGTTGTTCTCCGTCT Direct Gain 0 0.957959830314332 0 0.999986410140991 prediction 0.915919660628664 Functional Gain - MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266466 chr11:65266466 . . 0 21 hPsi_associated_SNPs_104498 0 0 0 0 0 unknown 0 0.434738082698486 0.999972820281982 0 hPsi_site_3458 iPseU_CNN:0.999972820281982;iRNA_PseU:0 3459 chr1 145299809 145299809 1 + G A rs61814630 145299809 - 145299789 145299829 41 TCATTGATTTCTAGAATGTTCATCTCTGCCTTCTCGCTGGA TCATTGATTTCTAGAATGTTTATCTCTGCCTTCTCGCTGGA Direct Gain 0 0.957959779093811 0 0.929589688777924 prediction 0.915919558187622 Functional Gain - NBPF10 ENSG00000163386 CDS Human other chr1:145299809 chr1:145299809 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_104499 0 0 0 0 0 chromatin 0 0.439664180067825 0.859179377555848 0 hPsi_site_3459 iPseU_CNN:0.859179377555848;iRNA_PseU:0 3460 chr11 5841701 5841701 1 + G A rs73394370 5841701 - 5841681 5841721 41 GCTGATGAGGCAGATGAGCCCACAGTTCCCCACGACAGCAA GCTGATGAGGCAGATGAGCCTACAGTTCCCCACGACAGCAA Direct Gain 0 0.957956267468232 0 0.992977380752563 prediction 0.915912534936464 Functional Gain - OR52N2 ENSG00000180988 CDS Human protein_coding chr11:5841701 chr11:5841701 nonsynonymous SNV 0.238 3 21 hPsi_associated_SNPs_104500 0 0 0 0 0 unknown 0 0.438734182934646 0.985954761505126 0 hPsi_site_3460 iPseU_CNN:0.985954761505126;iRNA_PseU:0 3461 chr5 140616446 140616446 1 + C T UCEC 140616446 + 140616426 140616466 41 TGAAGCCGGTGATTCCCAATCTCCTGTCCCGCGACAGCGAA TGAAGCCGGTGATTCCCAATTTCCTGTCCCGCGACAGCGAA Direct Gain 0 0.957948231558792 0 0.983745336532593 prediction 0.915896463117584 Functional Gain - PCDHB18P ENSG00000146001 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:140616446 chr5:140616446 . . 0 21 hPsi_associated_SNPs_104501 0 0 0 0 0 unknown 0 0.438742275235162 0.967490673065186 0 hPsi_site_3461 iPseU_CNN:0.967490673065186;iRNA_PseU:0 3462 chr1 109805471 109805471 1 + G T KICH 109805471 + 109805451 109805491 41 TGCTACTAGGCGGGGTGCCTGACCTGCCCGAGAGCTTCCCA TGCTACTAGGCGGGGTGCCTTACCTGCCCGAGAGCTTCCCA Direct Gain 0 0.957947040903663 0 0.999850630760193 prediction 0.915894081807325 Functional Gain - CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109805471 chr1:109805471 nonsynonymous SNV 0.989 3 21 hPsi_associated_SNPs_104502 0 0 1 0 1 Endoplasmic reticulum 0 0.43872717287374 0.999701261520386 0 hPsi_site_3462 iPseU_CNN:0.999701261520386;iRNA_PseU:0 3463 chr17 39566038 39566038 1 + C T rs150972231 39566038 + 39566018 39566058 41 GACAGAAGCAGCCAACTTGGCATTGTCCCATCCCCATCCAA GACAGAAGCAGCCAACTTGGTATTGTCCCATCCCCATCCAA Direct Gain 0 0.957933100591877 0 0.99965888261795 prediction 0.915866201183753 Functional Gain - LOC100505782 ENSG00000234859 ncRNA_exonic Human antisense chr17:39566038 chr17:39566038 . . 0 21 hPsi_associated_SNPs_104503 0 0 0 0 0 unknown 0 0.43871859905258 0.9993177652359 0 hPsi_site_3463 iPseU_CNN:0.9993177652359;iRNA_PseU:0 3464 chrX 12724975 12724975 1 + C A UCEC 12724975 - 12724955 12724995 41 TAGGTCACTGAGGAACTTGAGATAATGGACCTTGGCTTGTA TAGGTCACTGAGGAACTTGATATAATGGACCTTGGCTTGTA Direct Gain 0 0.957931479530673 0 0.999999403953552 prediction 0.915862959061347 Functional Gain - FRMPD4 ENSG00000169933 CDS Human protein_coding chrX:12724975 chrX:12724975 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104504 0 0 0 0 0 exosome 0 0.438711997523203 0.999998807907104 0 hPsi_site_3464 iPseU_CNN:0.999998807907104;iRNA_PseU:0 3465 chr9 72659550 72659550 1 + G A SARC 72659550 - 72659530 72659570 41 AAAGCCGCAAGTGCTCTCTTCAAAGGCACAGGACCCAGCGG AAAGCCGCAAGTGCTCTCTTTAAAGGCACAGGACCCAGCGG Direct Gain 0 0.957921690195965 0 0.999993026256561 prediction 0.915843380391929 Functional Gain - MAMDC2 ENSG00000165072 CDS Human protein_coding chr9:72659550 chr9:72659550 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_104505 0 0 0 0 0 nucleus 0 0.438743642164197 0.999986052513122 0 hPsi_site_3465 iPseU_CNN:0.999986052513122;iRNA_PseU:0 3466 chr15 58840664 58840664 1 + G A LIHC 58840664 - 58840644 58840684 41 TGCAGCGGCCCTTCTTGCAGCTCAGGCACAGGCCCTGGCTG TGCAGCGGCCCTTCTTGCAGTTCAGGCACAGGCCCTGGCTG Direct Gain 0 0.957914455816598 0 0.998792231082916 prediction 0.915828911633196 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58840664 chr15:58840664 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104506 0 0 0 0 0 Endoplasmic reticulum 0 0.439855824199857 0.997584462165832 0 hPsi_site_3466 iPseU_CNN:0.997584462165832;iRNA_PseU:0 3467 chr12 1940622 1940622 1 + G T LUSC 1940622 + 1940602 1940642 41 TGCAGCTGCTGCAGGTCGGGGATAACCCCTGGGAGTGTGAC TGCAGCTGCTGCAGGTCGGGTATAACCCCTGGGAGTGTGAC Direct Gain 0 0.957912033790602 0 0.998940706253052 prediction 0.915824067581204 Functional Gain - LRTM2 ENSG00000166159 CDS Human protein_coding chr12:1940622 chr12:1940622 nonsynonymous SNV 0.985 2 21 hPsi_associated_SNPs_104507 0 0 0 0 1 exosome 0 0.438718998091399 0.997881412506104 0 hPsi_site_3467 iPseU_CNN:0.997881412506104;iRNA_PseU:0 3468 chr9 131110937 131110937 1 + G T UCEC 131110937 + 131110917 131110957 41 ACCTGGACCCTCTGCTGAAAGATGCTCCCAAGCACCTTCCC ACCTGGACCCTCTGCTGAAATATGCTCCCAAGCACCTTCCC Direct Gain 0 0.957910767647636 0 0.997423529624939 prediction 0.915821535295272 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131110937 chr9:131110937 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_104508 0 0 0 0 1 Ribosome 0 0.438718495793881 0.994847059249878 0 hPsi_site_3468 iPseU_CNN:0.994847059249878;iRNA_PseU:0 3469 chr11 57310520 57310520 1 + G A SKCM 57310520 - 57310500 57310540 41 TTCTCCTCAGCCTTCTGCTTCTCAGAGGCCAGCGTGCTCTC TTCTCCTCAGCCTTCTGCTTTTCAGAGGCCAGCGTGCTCTC Direct Gain 0 0.957907954683189 0 0.903880953788757 prediction 0.915815909366377 Functional Gain - SMTNL1 ENSG00000214872 CDS Human protein_coding chr11:57310520 chr11:57310520 synonymous SNV . 0 21 hPsi_associated_SNPs_104509 0 0 0 0 0 exosome 0 0.438692732174172 0.807761907577514 0 hPsi_site_3469 iPseU_CNN:0.807761907577514;iRNA_PseU:0 3470 chr10 105205183 105205183 1 + G T LUAD 105205183 + 105205163 105205203 41 AGCTTGGCCCCCAAGAGAATGAAGTTCTTCTTCAAGCGCTA AGCTTGGCCCCCAAGAGAATTAAGTTCTTCTTCAAGCGCTA Direct Gain 0 0.957900335835257 0 0.986716866493225 prediction 0.915800671670514 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105205183 chr10:105205183 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104510 0 0 1 0 1 Nucleus 0 0.438703218211435 0.97343373298645 0 hPsi_site_3470 iPseU_CNN:0.97343373298645;iRNA_PseU:0 3471 chrX 114141513 114141513 1 + C A LUAD 114141513 - 114141493 114141533 41 TTCGAAGCTTTTCTTTCATTGTTGATAGCCTGCATGGTGCC TTCGAAGCTTTTCTTTCATTTTTGATAGCCTGCATGGTGCC Direct Gain 0 0.957898360101007 0 0.997095882892609 prediction 0.915796720202015 Functional Gain - HTR2C ENSG00000147246 CDS Human protein_coding chrX:114141513 chrX:114141513 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_104511 0 0 0 0 0 exosome 0 0.438719338540984 0.994191765785218 0 hPsi_site_3471 iPseU_CNN:0.994191765785218;iRNA_PseU:0 3472 chr19 58099930 58099930 1 + C A LUSC 58099930 - 58099910 58099950 41 TCCTGTGAGAAGTAAATGGCGATGTCCTCAAAGGTCACACA TCCTGTGAGAAGTAAATGGCTATGTCCTCAAAGGTCACACA Direct Gain 0 0.957885659015568 0 0.912185907363892 prediction 0.915771318031136 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58099930 chr19:58099930 synonymous SNV . 0 21 hPsi_associated_SNPs_104512 0 0 0 0 0 exosome 0 0.438719481864541 0.824371814727784 0 hPsi_site_3472 iPseU_CNN:0.824371814727784;iRNA_PseU:0 3473 chr17 21081617 21081617 1 + G A SKCM 21081617 - 21081597 21081637 41 GGTGAGTTCTCTGATGAGCTCTTCTAGGGCCCCACCATTCC GGTGAGTTCTCTGATGAGCTTTTCTAGGGCCCCACCATTCC Direct Gain 0 0.95787598866923 0 0.998404681682587 prediction 0.915751977338461 Functional Gain - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21081617 chr17:21081617 nonsynonymous SNV 0.672 1 21 hPsi_associated_SNPs_104513 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593193081 0.996809363365174 0 hPsi_site_3473 iPseU_CNN:0.996809363365174;iRNA_PseU:0 3474 chr2 168725787 168725787 1 + C T UCEC 168725787 + 168725767 168725807 41 GTGAGAAAAACATTCCTTTTCTTGTTATCCTCATCAGCACC GTGAGAAAAACATTCCTTTTTTTGTTATCCTCATCAGCACC Direct Gain 0 0.957875560287905 0 0.429527848958969 prediction 0.915751120575809 Functional Gain - B3GALT1 ENSG00000172318 CDS Human protein_coding chr2:168725787 chr2:168725787 nonsynonymous SNV 0.988 4 21 hPsi_associated_SNPs_104514 0 0 0 0 0 chromatin 0 0.438722132327872 0 0 hPsi_site_3474 iPseU_CNN:0;iRNA_PseU:0 3475 chr7 106508108 106508108 1 + C T SKCM 106508108 + 106508088 106508128 41 GCTGCGGCCAGCCTGTCCTCCATGGAGCTCATCCCCATCGA GCTGCGGCCAGCCTGTCCTCTATGGAGCTCATCCCCATCGA Direct Gain 0 0.957874817566732 0 1 prediction 0.915749635133464 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508108 chr7:106508108 synonymous SNV . 0 21 hPsi_associated_SNPs_104515 0 0 0 0 0 Cytosol 0 0.438516822418505 1 0 hPsi_site_3475 iPseU_CNN:1;iRNA_PseU:0 3476 chr10 77795768 77795768 1 + C A COAD 77795768 - 77795748 77795788 41 ATGCGCTCAGTCCTTCCAGTGACCTGCAATGACAAAGGCAA ATGCGCTCAGTCCTTCCAGTTACCTGCAATGACAAAGGCAA Direct Gain 0 0.957871867410659 0 0.999999821186066 prediction 0.915743734821318 Functional Gain - LRMDA ENSG00000148655 CDS Human protein_coding chr10:77795768 chr10:77795768 stopgain 1.000 0 21 hPsi_associated_SNPs_104516 0 0 0 0 0 Nucleus 0 0.438714296310935 0.999999642372132 0 hPsi_site_3476 iPseU_CNN:0.999999642372132;iRNA_PseU:0 3477 chr22 21057978 21057978 1 + C T rs539598116 21057978 + 21057958 21057998 41 AGGAGCAGACCGTAGTCCTGCAGGTGCGGCCCCACTCAGAC AGGAGCAGACCGTAGTCCTGTAGGTGCGGCCCCACTCAGAC Direct Gain 0 0.957867966624062 0 0.998627722263336 prediction 0.915735933248125 Functional Gain - TMEM191A ENSG00000226287 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:21057978 chr22:21057978 . . 0 21 hPsi_associated_SNPs_104517 0 0 0 0 2 unknown 0 0.43872519209787 0.997255444526672 0 hPsi_site_3477 iPseU_CNN:0.997255444526672;iRNA_PseU:0 3478 chr5 139819840 139819840 1 + G A LUAD 139819840 - 139819820 139819860 41 TCTGCTTACTTGTGCTAATTCATAATACCCTGCTGAACAAG TCTGCTTACTTGTGCTAATTTATAATACCCTGCTGAACAAG Direct Gain 0 0.957866045002675 0 0.841765940189362 prediction 0.915732090005351 Functional Gain - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139819840 chr5:139819840 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104518 0 0 0 0 0 unknown 0 0.447811000322285 0.683531880378724 0 hPsi_site_3478 iPseU_CNN:0.683531880378724;iRNA_PseU:0 3479 chr6 117232170 117232170 1 + C A LUSC 117232170 - 117232150 117232190 41 GCATCCTTGGTATACAAGGTGTTGAGCGCTGGGGAATTCTG GCATCCTTGGTATACAAGGTTTTGAGCGCTGGGGAATTCTG Direct Gain 0 0.957865276807243 0 0.932429611682892 prediction 0.915730553614487 Functional Gain - RFX6 ENSG00000185002 CDS Human protein_coding chr6:117232170 chr6:117232170 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104519 0 0 0 0 0 membrane 0 0.438718634339895 0.864859223365784 0 hPsi_site_3479 iPseU_CNN:0.864859223365784;iRNA_PseU:0 3480 chr20 62373320 62373320 1 + G A LUAD 62373320 - 62373300 62373340 41 GGTGGACGGAGAGGACTGGTCACTGGCCAGGTCCCATCCCC GGTGGACGGAGAGGACTGGTTACTGGCCAGGTCCCATCCCC Direct Gain 0 0.957864660984495 0 0.999563932418823 prediction 0.915729321968991 Functional Gain - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373320 chr20:62373320 nonsynonymous SNV 0.970 1 21 hPsi_associated_SNPs_104520 0 0 0 0 0 Cytosol 0 0.438219988244007 0.999127864837646 0 hPsi_site_3480 iPseU_CNN:0.999127864837646;iRNA_PseU:0 3481 chr18 72178174 72178174 1 + G A BLCA 72178174 - 72178154 72178194 41 CTTTCCCAGCCAGTAATTGTCAGAAATGCAGACATAGTCCA CTTTCCCAGCCAGTAATTGTTAGAAATGCAGACATAGTCCA Direct Gain 0 0.957857525644724 0 0.0290581881999969 prediction 0.915715051289449 Functional Gain - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72178174 chr18:72178174 nonsynonymous SNV 0.979 4 21 hPsi_associated_SNPs_104521 0 0 0 0 0 Ribosome 0 0.43905604299136 0 0 hPsi_site_3481 iPseU_CNN:0;iRNA_PseU:0 3482 chrX 101817814 101817814 1 + G A rs17284949 101817814 - 101817794 101817834 41 ATATACCTTTTGGTTTTCCTCATCATGAATCTTGCAGTTGA ATATACCTTTTGGTTTTCCTTATCATGAATCTTGCAGTTGA Direct Gain 0 0.957847701126342 0 0.370277017354965 prediction 0.915695402252684 Functional Gain - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101817814 chrX:101817814 . . 0 21 hPsi_associated_SNPs_104522 0 0 0 0 0 unknown 0 0.43871971897009 0 0 hPsi_site_3482 iPseU_CNN:0;iRNA_PseU:0 3483 chrX 48682631 48682631 1 + G T SARC 48682631 + 48682611 48682651 41 CCAACACCATGGAAATTCTGGACACCCGCTGGTCCTCAGCT CCAACACCATGGAAATTCTGTACACCCGCTGGTCCTCAGCT Direct Gain 0 0.957841969946485 0 0.994895994663239 prediction 0.91568393989297 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48682631 chrX:48682631 nonsynonymous SNV 0.908 2 21 hPsi_associated_SNPs_104523 0 0 0 0 2 Cytosol 0 0.438718592999482 0.989791989326478 0 hPsi_site_3483 iPseU_CNN:0.989791989326478;iRNA_PseU:0 3484 chr1 109731732 109731732 1 + G A CESC 109731732 - 109731712 109731752 41 CGTGTTCCACCATTTGTATTCAAATCCCACAGCAGGTTCAG CGTGTTCCACCATTTGTATTTAAATCCCACAGCAGGTTCAG Direct Gain 0 0.957837421471656 0 0.999709725379944 prediction 0.915674842943313 Functional Gain - KIAA1324 ENSG00000116299 CDS Human protein_coding chr1:109731732 chr1:109731732 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104524 0 0 0 0 0 exosome 0 0.438721589912067 0.999419450759888 0 hPsi_site_3484 iPseU_CNN:0.999419450759888;iRNA_PseU:0 3485 chr11 55111075 55111075 1 + C A LUSC 55111075 - 55111055 55111095 41 ATGCAAACCAGTCGATTCATGATGTTCAAATAGTGCAGCGG ATGCAAACCAGTCGATTCATTATGTTCAAATAGTGCAGCGG Direct Gain 0 0.957836000141783 0 0.998458325862885 prediction 0.915672000283567 Functional Gain - OR4A16 ENSG00000181961 CDS Human protein_coding chr11:55111075 chr11:55111075 synonymous SNV . 0 21 hPsi_associated_SNPs_104525 0 0 0 0 0 unknown 0 0.431951195660078 0.99691665172577 0 hPsi_site_3485 iPseU_CNN:0.99691665172577;iRNA_PseU:0 3486 chr6 106978066 106978066 1 + C T ACC 106978066 + 106978046 106978086 41 TTCAGGATTACAGAGTTAGTCACATTGACTTATTTACTGAA TTCAGGATTACAGAGTTAGTTACATTGACTTATTTACTGAA Direct Gain 0 0.957830317409271 0 0.995628833770752 prediction 0.915660634818542 Functional Gain - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:106978066 chr6:106978066 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_104526 0 0 0 0 1 unknown 0 0.438705229385612 0.991257667541504 0 hPsi_site_3486 iPseU_CNN:0.991257667541504;iRNA_PseU:0 3487 chr19 55144534 55144534 1 + G A UCEC 55144534 - 55144514 55144554 41 TGTGACTGACACAGCAGGGTCACGTTCTCTCCTGAGGCCAC TGTGACTGACACAGCAGGGTTACGTTCTCTCCTGAGGCCAC Direct Gain 0 0.957828409188413 0 0.999933123588562 prediction 0.915656818376826 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55144534 chr19:55144534 synonymous SNV . 0 21 hPsi_associated_SNPs_104527 0 0 0 0 0 exosome 0 0.438222177439224 0.999866247177124 0 hPsi_site_3487 iPseU_CNN:0.999866247177124;iRNA_PseU:0 3488 chr9 730817 730817 1 + G A rs12003752 730817 - 730797 730837 41 ACTAAACAGGGATTATTATTCTTCTTCAGCTGAGATAACCT ACTAAACAGGGATTATTATTTTTCTTCAGCTGAGATAACCT Direct Gain 0 0.957826245349262 0 0.172268509864807 prediction 0.915652490698524 Functional Gain - KANK1 ENSG00000107104 intronic Human protein_coding chr9:730817 chr9:730817 . . 0 21 hPsi_associated_SNPs_104528 0 0 0 0 0 Nucleus 0 0.438749120567612 0 0 hPsi_site_3488 iPseU_CNN:0;iRNA_PseU:0 3489 chr5 140262664 140262664 1 + G T UCEC 140262664 + 140262644 140262684 41 TAAATGCCACAGATCCTGATGATGGTACAAATGGAGATATA TAAATGCCACAGATCCTGATTATGGTACAAATGGAGATATA Direct Gain 0 0.957823026240269 0 0.329618901014328 prediction 0.915646052480539 Functional Gain - PCDHA13 ENSG00000239389 CDS Human protein_coding chr5:140262664 chr5:140262664 nonsynonymous SNV 0.966 3 21 hPsi_associated_SNPs_104529 0 0 0 0 0 exosome 0 0.438718222811334 0 0 hPsi_site_3489 iPseU_CNN:0;iRNA_PseU:0 3490 chr2 185803655 185803655 1 + C T SKCM 185803655 + 185803635 185803675 41 TCATTCCAGCTTCCGTTCTTCATCCTAGCCATCTGGCTTTC TCATTCCAGCTTCCGTTCTTTATCCTAGCCATCTGGCTTTC Direct Gain 0 0.957818706034883 0 0.999523401260376 prediction 0.915637412069767 Functional Gain - ZNF804A ENSG00000170396 CDS Human protein_coding chr2:185803655 chr2:185803655 nonsynonymous SNV 0.892 4 21 hPsi_associated_SNPs_104530 0 0 0 0 0 nucleoplasm 0 0.438533101935214 0.999046802520752 0 hPsi_site_3490 iPseU_CNN:0.999046802520752;iRNA_PseU:0 3491 chr5 142283211 142283211 1 + G T SKCM 142283211 + 142283191 142283231 41 CAGTCCCTACACCATGGAGGGATACCTCTACGTGCAGGAGA CAGTCCCTACACCATGGAGGTATACCTCTACGTGCAGGAGA Direct Gain 0 0.957812859513807 0 0.999997615814209 prediction 0.915625719027614 Functional Gain - ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142283211 chr5:142283211 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_104531 0 0 1 0 1 Nucleus 0 0.436839939625212 0.999995231628418 0 hPsi_site_3491 iPseU_CNN:0.999995231628418;iRNA_PseU:0 3492 chrX 67941939 67941939 1 + G A rs779378953 67941939 - 67941919 67941959 41 GGGTGGCTGCCATGTTGTCACTCAGGTCCCTAGGGCCTGGC GGGTGGCTGCCATGTTGTCATTCAGGTCCCTAGGGCCTGGC Direct Gain 0 0.957811752662159 0 0.972996354103088 prediction 0.915623505324318 Functional Gain - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67941939 chrX:67941939 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104532 0 0 0 0 0 chromatin 0 0.43871357726464 0.945992708206176 0 hPsi_site_3492 iPseU_CNN:0.945992708206176;iRNA_PseU:0 3493 chr3 11596306 11596306 1 + G A COAD 11596306 - 11596286 11596326 41 GGGGCCATCTCAGATGGTCTCATCATCGCTCATGTCCCAGA GGGGCCATCTCAGATGGTCTTATCATCGCTCATGTCCCAGA Direct Gain 0 0.957796269913685 0 0.984105825424194 prediction 0.91559253982737 Functional Gain - ATG7 ENSG00000197548 CDS Human protein_coding chr3:11596306 chr3:11596306 nonsynonymous SNV 0.489 3 21 hPsi_associated_SNPs_104533 0 0 0 0 0 Cytosol 0 0.440340060750293 0.968211650848388 0 hPsi_site_3493 iPseU_CNN:0.968211650848388;iRNA_PseU:0 3494 chr7 89903401 89903401 1 + C T SKCM 89903401 + 89903381 89903421 41 TGATCACTACAATTATAGCTCAAAATCCTGAAGCACCAATG TGATCACTACAATTATAGCTTAAAATCCTGAAGCACCAATG Direct Gain 0 0.957796018881223 0 0.998568654060364 prediction 0.915592037762446 Functional Gain - CFAP69 ENSG00000105792 CDS Human protein_coding chr7:89903401 chr7:89903401 stopgain 0.997 1 21 hPsi_associated_SNPs_104534 0 0 0 0 1 cytosol 0 0.438718362153598 0.997137308120728 0 hPsi_site_3494 iPseU_CNN:0.997137308120728;iRNA_PseU:0 3495 chr10 72619143 72619143 1 + G A UCEC 72619143 - 72619123 72619163 41 ATGCAGGGGGTTACTCCATGCAAAATCTCCATAAGCCTGCA ATGCAGGGGGTTACTCCATGTAAAATCTCCATAAGCCTGCA Direct Gain 0 0.957794886154177 0 0.999723672866821 prediction 0.915589772308353 Functional Gain - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72619143 chr10:72619143 nonsynonymous SNV 0.994 0 21 hPsi_associated_SNPs_104535 0 0 0 0 0 Ribosome 0 0.438718564366356 0.999447345733642 0 hPsi_site_3495 iPseU_CNN:0.999447345733642;iRNA_PseU:0 3496 chr12 125834167 125834167 1 + C T BLCA 125834167 + 125834147 125834187 41 GCCCGGGTGGAGCCATTCTTCATCTACCGAGCCAGGACACC GCCCGGGTGGAGCCATTCTTTATCTACCGAGCCAGGACACC Direct Gain 0 0.957790267377258 0 0.847142696380615 prediction 0.915580534754517 Functional Gain - TMEM132B ENSG00000139364 CDS Human protein_coding chr12:125834167 chr12:125834167 synonymous SNV . 0 21 hPsi_associated_SNPs_104536 0 0 0 0 0 exosome 0 0.438718592995102 0.69428539276123 0 hPsi_site_3496 iPseU_CNN:0.69428539276123;iRNA_PseU:0 3497 chrX 66765627 66765627 1 + G A rs6152 66765627 - 66765607 66765647 41 GAAGTGGGAGCCCCCGAGGCCTCCCTCGCTCTCCCGCTGCT GAAGTGGGAGCCCCCGAGGCTTCCCTCGCTCTCCCGCTGCT Direct Gain 0 0.957782512766897 0 0.861317694187164 prediction 0.915565025533795 Functional Gain - AR ENSG00000169083 CDS Human protein_coding chrX:66765627 chrX:66765627 synonymous SNV . 0 21 hPsi_associated_SNPs_104537 2 0 0 0 0 Endoplasmic reticulum 0 0.438718454717939 0.722635388374328 0 hPsi_site_3497 iPseU_CNN:0.722635388374328;iRNA_PseU:0 3498 chr2 27528496 27528496 1 + G A SKCM 27528496 - 27528476 27528516 41 TCCAGCACTGCGCACAGGCTCTCAAACCTCTGGTTTAACAA TCCAGCACTGCGCACAGGCTTTCAAACCTCTGGTTTAACAA Direct Gain 0 0.957776960581662 0 0.986319839954376 prediction 0.915553921163323 Functional Gain - TRIM54 ENSG00000138100 CDS Human protein_coding chr2:27528496 chr2:27528496 synonymous SNV . 0 21 hPsi_associated_SNPs_104538 0 0 0 0 0 Nucleus 0 0.438599448189972 0.972639679908752 0 hPsi_site_3498 iPseU_CNN:0.972639679908752;iRNA_PseU:0 3499 chr10 69909844 69909844 1 + C A rs147184158 69909844 - 69909824 69909864 41 GTAAACACAGGAGCTGCAATGATAGGTTTTCCATCCAATCC GTAAACACAGGAGCTGCAATTATAGGTTTTCCATCCAATCC Direct Gain 0 0.957772494698088 0 0.996871709823608 prediction 0.915544989396175 Functional Gain - MYPN ENSG00000138347 CDS Human protein_coding chr10:69909844 chr10:69909844 synonymous SNV . 0 21 hPsi_associated_SNPs_104539 3 0 0 0 0 Cytosol 0 0.43929698055116 0.993743419647216 0 hPsi_site_3499 iPseU_CNN:0.993743419647216;iRNA_PseU:0 3500 chr18 21532955 21532955 1 + C T BLCA 21532955 + 21532935 21532975 41 ACCAGCCTCCTTTCCCCAGTCACCATAAAACAACACATCCT ACCAGCCTCCTTTCCCCAGTTACCATAAAACAACACATCCT Direct Gain 0 0.95777196141159 0 0.860617876052856 prediction 0.915543922823181 Functional Gain - LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21532955 chr18:21532955 synonymous SNV . 0 21 hPsi_associated_SNPs_104540 2 0 0 0 1 Cytosol 0 0.438685107285613 0.721235752105712 0 hPsi_site_3500 iPseU_CNN:0.721235752105712;iRNA_PseU:0 3501 chrX 27840218 27840218 1 + C A STAD 27840218 - 27840198 27840238 41 TGATAGCGTGGAGGATCACTGTTGGGCACTTGCTGGTACTC TGATAGCGTGGAGGATCACTTTTGGGCACTTGCTGGTACTC Direct Gain 0 0.957766149776722 0 0.999996900558472 prediction 0.915532299553443 Functional Gain - MAGEB10 ENSG00000177689 CDS Human protein_coding chrX:27840218 chrX:27840218 nonsynonymous SNV 0.982 3 21 hPsi_associated_SNPs_104541 0 0 0 0 0 Nucleus 0 0.438718877087395 0.999993801116944 0 hPsi_site_3501 iPseU_CNN:0.999993801116944;iRNA_PseU:0 3502 chr1 228560366 228560366 1 + C A rs548966351 228560366 - 228560346 228560386 41 CCACCTCGGAAATGTCCAGGGATATTGTGTCGGCCGCCTCC CCACCTCGGAAATGTCCAGGTATATTGTGTCGGCCGCCTCC Direct Gain 0 0.957764518966381 0 0.9930220246315 prediction 0.915529037932763 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228560366 chr1:228560366 nonsynonymous SNV 0.779 3 21 hPsi_associated_SNPs_104542 0 0 0 0 0 Ribosome 0 0.438713032956696 0.986044049263 0 hPsi_site_3502 iPseU_CNN:0.986044049263;iRNA_PseU:0 3503 chr9 130475068 130475068 1 + C T GBM 130475068 + 130475048 130475088 41 ATGCTGCAGCAACTGCTGGTCATGCTCAGCTCCACTGTGGC ATGCTGCAGCAACTGCTGGTTATGCTCAGCTCCACTGTGGC Direct Gain 0 0.957759072600368 0 0.386016130447388 prediction 0.915518145200736 Functional Gain - CFAP157 ENSG00000160401 CDS Human protein_coding chr9:130475068 chr9:130475068 synonymous SNV . 0 21 hPsi_associated_SNPs_104543 0 0 0 1 2 Cytosol 0 0.433664635493093 0 0 hPsi_site_3503 iPseU_CNN:0;iRNA_PseU:0 3504 chr9 97563162 97563162 1 + G T UCEC 97563162 + 97563142 97563182 41 CTCACGGGTGCCTGCCAAGAGACCCTTCTGCGGCTGATCCC CTCACGGGTGCCTGCCAAGATACCCTTCTGCGGCTGATCCC Direct Gain 0 0.957757196761018 0 0.164624512195587 prediction 0.915514393522036 Functional Gain - C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97563162 chr9:97563162 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_104544 0 0 1 0 0 Cytosol 0 0.438718592995102 0 0 hPsi_site_3504 iPseU_CNN:0;iRNA_PseU:0 3505 chr11 134357109 134357109 1 + T A rs114739040 134357109 - 134357089 134357129 41 TGGAGGAGCAGCCCCACGGGAATAGACCAGGAGGGGAGTGA TGGAGGAGCAGCCCCACGGGTATAGACCAGGAGGGGAGTGA Direct Gain 0 0.957746083605758 0 0.385021686553955 prediction 0.915492167211516 Functional Gain - LOC283177 ENSG00000255545 ncRNA_exonic Human processed_transcript chr11:134357109 chr11:134357109 . . 0 21 hPsi_associated_SNPs_104545 0 0 0 0 0 unknown 0 0.438718593451905 0 0 hPsi_site_3505 iPseU_CNN:0;iRNA_PseU:0 3506 chr1 15960364 15960364 1 + G A rs41270277 15960364 - 15960344 15960384 41 GTGGTCTCACCAGATGGTGGCTTCTGCTCAGTCCGGGGGTC GTGGTCTCACCAGATGGTGGTTTCTGCTCAGTCCGGGGGTC Direct Gain 0 0.957741483846934 0 0.957249879837036 prediction 0.915482967693868 Functional Gain - DDI2 ENSG00000197312 UTR3 Human protein_coding chr1:15960364 chr1:15960364 . . 0 21 hPsi_associated_SNPs_104546 0 0 0 0 0 Ribosome 0 0.436993664814866 0.914499759674072 0 hPsi_site_3506 iPseU_CNN:0.914499759674072;iRNA_PseU:0 3507 chr11 130332037 130332037 1 + G T UCEC 130332037 + 130332017 130332057 41 GTCTGTGAGGAGGTGTTTGGGAAGCTCCGAGCCAACCACAT GTCTGTGAGGAGGTGTTTGGTAAGCTCCGAGCCAACCACAT Direct Gain 0 0.957735744545066 0 0.999964773654938 prediction 0.915471489090132 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130332037 chr11:130332037 synonymous SNV . 0 21 hPsi_associated_SNPs_104547 0 0 0 0 1 exosome 0 0.438718968836761 0.999929547309876 0 hPsi_site_3507 iPseU_CNN:0.999929547309876;iRNA_PseU:0 3508 chr20 1895812 1895812 1 + G T PRAD 1895812 + 1895792 1895832 41 GTGTTGGTTGCAGCTGGAGAGACAGCCACTCTGCGCTGCAC GTGTTGGTTGCAGCTGGAGATACAGCCACTCTGCGCTGCAC Direct Gain 0 0.957729589118229 0 0.935829639434814 prediction 0.915459178236457 Functional Gain - SIRPA ENSG00000198053 CDS Human protein_coding chr20:1895812 chr20:1895812 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_104548 0 0 0 0 2 Nucleus 0 0.4193706274159 0.871659278869628 0 hPsi_site_3508 iPseU_CNN:0.871659278869628;iRNA_PseU:0 3509 chr17 18138202 18138202 1 + G A CESC 18138202 - 18138182 18138222 41 CACACTTACACAGTGGCGGTCACCATAGCTGGCACGGGGCA CACACTTACACAGTGGCGGTTACCATAGCTGGCACGGGGCA Direct Gain 0 0.957729013698104 0 0.994137525558472 prediction 0.915458027396208 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18138202 chr17:18138202 nonsynonymous SNV 0.990 2 21 hPsi_associated_SNPs_104549 0 0 0 0 0 Cytosol 0 0.438718848211553 0.988275051116944 0 hPsi_site_3509 iPseU_CNN:0.988275051116944;iRNA_PseU:0 3510 chr5 5262855 5262855 1 + C T LUSC 5262855 + 5262835 5262875 41 AATCCCAAGACACGACCTGTCACGGGGCTGGTGCCTTGCAA AATCCCAAGACACGACCTGTTACGGGGCTGGTGCCTTGCAA Direct Gain 0 0.957712546101352 0 0.996455311775208 prediction 0.915425092202703 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5262855 chr5:5262855 synonymous SNV . 0 21 hPsi_associated_SNPs_104550 0 0 0 0 2 exosome 0 0.438718592995254 0.992910623550416 0 hPsi_site_3510 iPseU_CNN:0.992910623550416;iRNA_PseU:0 3511 chr17 78082385 78082385 1 + G A CESC 78082385 - 78082365 78082405 41 AGGGGGAAGTGGGCCCTGGTCATGTTCTCCACCACCTGGCG AGGGGGAAGTGGGCCCTGGTTATGTTCTCCACCACCTGGCG Direct Gain 0 0.957705199057205 0 0.999997138977051 prediction 0.915410398114409 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78082385 chr17:78082385 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_104551 0 0 0 0 0 Endoplasmic reticulum 0 0.438825481163183 0.999994277954102 0 hPsi_site_3511 iPseU_CNN:0.999994277954102;iRNA_PseU:0 3512 chr3 51978832 51978832 1 + G A UCEC 51978832 - 51978812 51978852 41 GGGTCCAGGGAGCAGGGCTGCACCCGCTTAGTCACAGTCCT GGGTCCAGGGAGCAGGGCTGTACCCGCTTAGTCACAGTCCT Direct Gain 0 0.957704024991346 0 0.999966859817505 prediction 0.915408049982692 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978832 chr3:51978832 synonymous SNV . 0 21 hPsi_associated_SNPs_104552 0 0 0 0 0 nucleus 0 0.438706409922848 0.99993371963501 0 hPsi_site_3512 iPseU_CNN:0.99993371963501;iRNA_PseU:0 3513 chr3 58145397 58145397 1 + G A UCEC 58145397 - 58145377 58145417 41 TCACCTGGCTCCAGCTCAGACACGTGGCACTCCTCCACGGC TCACCTGGCTCCAGCTCAGATACGTGGCACTCCTCCACGGC Direct Gain 0 0.957703235247606 0 0.999997735023499 prediction 0.915406470495212 Functional Gain - FLNB ENSG00000136068 CDS Human protein_coding chr3:58145397 chr3:58145397 synonymous SNV . 0 21 hPsi_associated_SNPs_104553 0 0 0 0 0 Cytosol 0 0.438564059859839 0.999995470046998 0 hPsi_site_3513 iPseU_CNN:0.999995470046998;iRNA_PseU:0 3514 chr17 72740494 72740494 1 + C T ACC 72740494 + 72740474 72740514 41 GCCCAGAGGGACGTGGTGATCATGCTGCTAGGCAACAAGGT GCCCAGAGGGACGTGGTGATTATGCTGCTAGGCAACAAGGT Direct Gain 0 0.957697422671293 0 0.999928176403046 prediction 0.915394845342586 Functional Gain - RAB37 ENSG00000172794 CDS Human protein_coding chr17:72740494 chr17:72740494 synonymous SNV . 0 21 hPsi_associated_SNPs_104554 0 0 0 8 2 nucleus 0 0.438718314891958 0.999856352806092 0 hPsi_site_3514 iPseU_CNN:0.999856352806092;iRNA_PseU:0 3515 chr22 20044178 20044178 1 + G A rs140136012 20044178 - 20044158 20044198 41 TGCAGAGGGGGGCAATGTGACACATTCTCTCCAGGTTGGGG TGCAGAGGGGGGCAATGTGATACATTCTCTCCAGGTTGGGG Direct Gain 0 0.957690655953319 0 0.999982059001923 prediction 0.915381311906639 Functional Gain - TANGO2 ENSG00000183597 intronic Human protein_coding chr22:20044178 chr22:20044178 . . 0 21 hPsi_associated_SNPs_104555 0 0 0 0 0 Nucleus 0 0.43916081876722 0.999964118003846 0 hPsi_site_3515 iPseU_CNN:0.999964118003846;iRNA_PseU:0 3516 chr9 138237555 138237555 1 + G A rs149256068 138237555 - 138237535 138237575 41 TGTGTGTGCACATAGCCAGGCACATACAGGCATACGCACAC TGTGTGTGCACATAGCCAGGTACATACAGGCATACGCACAC Direct Gain 0 0.957690478016714 0 0.999962568283081 prediction 0.915380956033429 Functional Gain - C9orf62 ENSG00000178243 UTR3 Human lincRNA chr9:138237555 chr9:138237555 . . 0 21 hPsi_associated_SNPs_104556 0 0 0 0 0 unknown 0 0.373936159089969 0.999925136566162 0 hPsi_site_3516 iPseU_CNN:0.999925136566162;iRNA_PseU:0 3517 chr19 57955273 57955273 1 + G A BLCA 57955273 - 57955253 57955293 41 CTTTCCATATTCAGTGCCCTCATAAGGCCTTTCTCCAGCAT CTTTCCATATTCAGTGCCCTTATAAGGCCTTTCTCCAGCAT Direct Gain 0 0.957674059144432 0 0.216338992118835 prediction 0.915348118288865 Functional Gain - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57955273 chr19:57955273 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_104557 0 0 0 0 0 exosome 0 0.438707385718599 0 0 hPsi_site_3517 iPseU_CNN:0;iRNA_PseU:0 3518 chr3 138191347 138191347 1 + C T rs139504758 138191347 + 138191327 138191367 41 AGAAGGCCCTACAGATTTGCCATGTCCCCCAGACCCTGCTT AGAAGGCCCTACAGATTTGCTATGTCCCCCAGACCCTGCTT Direct Gain 0 0.957668701806041 0 0.489711582660675 prediction 0.915337403612082 Functional Gain - ESYT3 ENSG00000158220 CDS Human protein_coding chr3:138191347 chr3:138191347 nonsynonymous SNV 0.005 1 21 hPsi_associated_SNPs_104558 0 0 0 1 0 nucleoplasm 0 0.438720335958146 0 0 hPsi_site_3518 iPseU_CNN:0;iRNA_PseU:0 3519 chr19 13249004 13249004 1 + G A BLCA 13249004 - 13248984 13249024 41 ATGTCGGCCGCGATGGCATTCATCTCGCTCTCCTTGAAGTT ATGTCGGCCGCGATGGCATTTATCTCGCTCTCCTTGAAGTT Direct Gain 0 0.957667223560304 0 0.999991774559021 prediction 0.915334447120608 Functional Gain - NACC1 ENSG00000160877 CDS Human protein_coding chr19:13249004 chr19:13249004 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_104559 0 0 0 0 0 Ribosome 0 0.438718573396812 0.999983549118042 0 hPsi_site_3519 iPseU_CNN:0.999983549118042;iRNA_PseU:0 3520 chr11 45246182 45246182 1 + C T BLCA 45246182 + 45246162 45246202 41 GGATGAAGAAGAGGAGCCTTCATCATTCAAGGCCGACAGTC GGATGAAGAAGAGGAGCCTTTATCATTCAAGGCCGACAGTC Direct Gain 0 0.957664201589028 0 0.997123122215271 prediction 0.915328403178056 Functional Gain - PRDM11 ENSG00000019485 CDS Human protein_coding chr11:45246182 chr11:45246182 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_104560 0 0 0 0 0 cytosol 0 0.438778652957431 0.994246244430542 0 hPsi_site_3520 iPseU_CNN:0.994246244430542;iRNA_PseU:0 3521 chr3 184020293 184020293 1 + C T SKCM 184020293 + 184020273 184020313 41 GACATGGAGTTGGTAGAAGACATCTTCACCTCCTGCAAGGA GACATGGAGTTGGTAGAAGATATCTTCACCTCCTGCAAGGA Direct Gain 0 0.957664028374003 0 0.999889135360718 prediction 0.915328056748006 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184020293 chr3:184020293 synonymous SNV . 0 21 hPsi_associated_SNPs_104561 0 0 1 0 1 Ribosome 0 0.438588955470614 0.999778270721436 0 hPsi_site_3521 iPseU_CNN:0.999778270721436;iRNA_PseU:0 3522 chr15 92706005 92706005 1 + C T CESC 92706005 + 92705985 92706025 41 GGCTTCATCCCTCCACCCCTCATCTTCGGGGCTGGCATCGA GGCTTCATCCCTCCACCCCTTATCTTCGGGGCTGGCATCGA Direct Gain 0 0.957661879566211 0 0.997705101966858 prediction 0.915323759132422 Functional Gain - SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92706005 chr15:92706005 synonymous SNV . 0 21 hPsi_associated_SNPs_104562 0 0 1 0 1 Nucleus 0 0.438718592993568 0.995410203933716 0 hPsi_site_3522 iPseU_CNN:0.995410203933716;iRNA_PseU:0 3523 chr17 57650573 57650573 1 + G A COAD 57650573 - 57650553 57650593 41 AGTTAGAGTTCTTTCATGGGCTTCATCCAAAATAATGACAC AGTTAGAGTTCTTTCATGGGTTTCATCCAAAATAATGACAC Direct Gain 0 0.957655978491321 0 0.986000955104828 prediction 0.915311956982643 Functional Gain - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57650573 chr17:57650573 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104563 0 0 0 0 0 Ribosome 0 0.438636525425037 0.972001910209656 0 hPsi_site_3523 iPseU_CNN:0.972001910209656;iRNA_PseU:0 3524 chr6 31917237 31917237 1 + G A STAD 31917237 - 31917217 31917257 41 GAAGCCAAAGCATTGATGTTCACTTGGTTCACCAAAGGCCC GAAGCCAAAGCATTGATGTTTACTTGGTTCACCAAAGGCCC Direct Gain 0 0.957644874051324 0 0.999991416931152 prediction 0.915289748102648 Functional Gain - CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31917237 chr6:31917237 synonymous SNV . 0 21 hPsi_associated_SNPs_104564 0 0 0 0 0 chromatin 0 0.43871859242402 0.999982833862304 0 hPsi_site_3524 iPseU_CNN:0.999982833862304;iRNA_PseU:0 3525 chr2 46524623 46524623 1 + T A rs558198311 46524623 - 46524603 46524643 41 GTCTCAGGACACTGCCGAGGATTGTACGGCCGCCTCAGGAG GTCTCAGGACACTGCCGAGGTTTGTACGGCCGCCTCAGGAG Direct Gain 0 0.957629738864262 0 0.965631484985352 prediction 0.915259477728525 Functional Gain - EPAS1 ENSG00000116016 UTR5 Human protein_coding chr2:46524623 chr2:46524623 . . 0 21 hPsi_associated_SNPs_104565 0 0 0 0 0 Cytosol 0 0.438719819831188 0.931262969970704 0 hPsi_site_3525 iPseU_CNN:0.931262969970704;iRNA_PseU:0 3526 chr9 116054831 116054831 1 + G A rs186373014 116054831 - 116054811 116054851 41 TCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAA TCAGAGTTGCCTGATGCTGTTAGCATTCCAAGCAAACTCAA Direct Gain 0 0.957629241541145 0 0.431479126214981 prediction 0.915258483082291 Functional Gain - PRPF4 ENSG00000136875 UTR3 Human protein_coding chr9:116054831 chr9:116054831 . . 0 21 hPsi_associated_SNPs_104566 0 0 0 0 0 Ribosome 0 0.438725883600676 0 0 hPsi_site_3526 iPseU_CNN:0;iRNA_PseU:0 3527 chr1 205238762 205238762 1 + G A LUSC 205238762 - 205238742 205238782 41 GGCGCTGGCGCTGGAGCACTCATCATCGCTGCCATACTTGG GGCGCTGGCGCTGGAGCACTTATCATCGCTGCCATACTTGG Direct Gain 0 0.957628890084295 0 0.99984085559845 prediction 0.91525778016859 Functional Gain - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205238762 chr1:205238762 nonsynonymous SNV 0.836 4 21 hPsi_associated_SNPs_104567 0 0 0 0 0 chromatin 0 0.438718593005029 0.9996817111969 0 hPsi_site_3527 iPseU_CNN:0.9996817111969;iRNA_PseU:0 3528 chr6 33882661 33882661 1 + C T rs4713722 33882661 + 33882641 33882681 41 GGGCTCGCCTGCCCCTGCATCACAGCTTCCTCTTCTGTTCA GGGCTCGCCTGCCCCTGCATTACAGCTTCCTCTTCTGTTCA Direct Gain 0 0.957628333037196 0 0.996378898620605 prediction 0.915256666074393 Functional Gain - MIR7159;MIR1275 ENSG00000233183 ncRNA_exonic Human lincRNA chr6:33882661 chr6:33882661 . . 0 21 hPsi_associated_SNPs_104568 0 0 0 0 0 unknown 0 0.438719524868804 0.99275779724121 0 hPsi_site_3528 iPseU_CNN:0.99275779724121;iRNA_PseU:0 3529 chr9 5769097 5769097 1 + G A HNSC 5769097 - 5769077 5769117 41 GCATAGCCAACTAATTAGTTCAAAGCCCAGCTGGGCTGCAA GCATAGCCAACTAATTAGTTTAAAGCCCAGCTGGGCTGCAA Direct Gain 0 0.957619041749539 0 0.993139505386353 prediction 0.915238083499079 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5769097 chr9:5769097 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104569 0 0 0 0 0 Nucleus 0 0.438718593149214 0.986279010772706 0 hPsi_site_3529 iPseU_CNN:0.986279010772706;iRNA_PseU:0 3530 chr7 102738797 102738797 1 + C T LUSC 102738797 + 102738777 102738817 41 GCCACGTAGCAAAGGAGATTCTTCTTCGAGTACTTACGCTA GCCACGTAGCAAAGGAGATTTTTCTTCGAGTACTTACGCTA Direct Gain 0 0.957618185242659 0 0.997740983963013 prediction 0.915236370485319 Functional Gain - ARMC10 ENSG00000170632 CDS Human protein_coding chr7:102738797 chr7:102738797 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104570 0 0 0 0 1 Ribosome 0 0.438401120593782 0.995481967926026 0 hPsi_site_3530 iPseU_CNN:0.995481967926026;iRNA_PseU:0 3531 chr11 64950979 64950979 1 + C T BLCA 64950979 + 64950959 64950999 41 TTGGCGGCCATCGCCTCCCTCACTCTCAACGACACCCTCCT TTGGCGGCCATCGCCTCCCTTACTCTCAACGACACCCTCCT Direct Gain 0 0.957615653032652 0 0.999950528144836 prediction 0.915231306065303 Functional Gain - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950979 chr11:64950979 synonymous SNV . 0 21 hPsi_associated_SNPs_104571 0 0 1 0 2 Ribosome 0 0.438718581580954 0.999901056289672 0 hPsi_site_3531 iPseU_CNN:0.999901056289672;iRNA_PseU:0 3532 chr18 8378361 8378361 1 + G A ESCA 8378361 - 8378341 8378381 41 GTCTGTGGATCCAGTTTGTTCATGTCATAATACAGAGACCT GTCTGTGGATCCAGTTTGTTTATGTCATAATACAGAGACCT Direct Gain 0 0.957607751267413 0 0.998904585838318 prediction 0.915215502534826 Functional Gain - PTPRM ENSG00000173482 CDS Human protein_coding chr18:8378361 chr18:8378361 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104572 0 0 0 0 0 Nucleus 0 0.436469247705415 0.997809171676636 0 hPsi_site_3532 iPseU_CNN:0.997809171676636;iRNA_PseU:0 3533 chr3 49211740 49211740 1 + G A BLCA 49211740 - 49211720 49211760 41 CCAGCAGTCCCGACGGGGCTCATACACACGTACCTGGGCCT CCAGCAGTCCCGACGGGGCTTATACACACGTACCTGGGCCT Direct Gain 0 0.957606901395829 0 0.031449019908905 prediction 0.915213802791657 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49211740 chr3:49211740 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104573 0 0 0 0 0 Cytosol 0 0.438503652207317 0 0 hPsi_site_3533 iPseU_CNN:0;iRNA_PseU:0 3534 chr6 31708290 31708290 1 + G A BLCA 31708290 - 31708270 31708310 41 CGGAGGAGGCCGCCCCAGGTCTCGGTCCCTGCGGTGTCCTC CGGAGGAGGCCGCCCCAGGTTTCGGTCCCTGCGGTGTCCTC Direct Gain 0 0.957603390316631 0 0.985184192657471 prediction 0.915206780633262 Functional Gain - MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31708290 chr6:31708290 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104574 0 0 0 0 0 Cytosol 0 0.438767613709885 0.970368385314942 0 hPsi_site_3534 iPseU_CNN:0.970368385314942;iRNA_PseU:0 3535 chr17 66123011 66123011 1 + A T rs149247972 66123011 + 66122991 66123031 41 CATTTTGTCTCAGTTTGTTTAACAGTTGGCTCTAAGTTGAA CATTTTGTCTCAGTTTGTTTTACAGTTGGCTCTAAGTTGAA Direct Gain 0 0.957602534620116 0 0.00929507613182068 prediction 0.915205069240232 Functional Gain - LINC00674 ENSG00000267023 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:66123011 chr17:66123011 . . 0 21 hPsi_associated_SNPs_104575 0 0 1 0 0 unknown 0 0.43798339325019 0 0 hPsi_site_3535 iPseU_CNN:0;iRNA_PseU:0 3536 chr17 79202841 79202841 1 + C T rs78610767 79202841 + 79202821 79202861 41 ATCAGGACAGGACTCTCCCGCAGCAGCCCCAGCCCCCACCA ATCAGGACAGGACTCTCCCGTAGCAGCCCCAGCCCCCACCA Direct Gain 0 0.957601516530356 0 0.999973297119141 prediction 0.915203033060711 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79202841 chr17:79202841 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104576 0 0 0 0 0 chromatin 0 0.438718701749729 0.999946594238282 0 hPsi_site_3536 iPseU_CNN:0.999946594238282;iRNA_PseU:0 3537 chr22 39886057 39886057 1 + G A rs76066045 39886057 - 39886037 39886077 41 GTCTCCTAATCACAGCAGCTCAGAATCAACTCCAACAAAGA GTCTCCTAATCACAGCAGCTTAGAATCAACTCCAACAAAGA Direct Gain 0 0.957599824495372 0 0.404416769742966 prediction 0.915199648990744 Functional Gain - MGAT3 ENSG00000128268 UTR3 Human protein_coding chr22:39886057 chr22:39886057 . . 0 21 hPsi_associated_SNPs_104577 0 0 0 0 0 Endoplasmic reticulum 0 0.438720119427781 0 0 hPsi_site_3537 iPseU_CNN:0;iRNA_PseU:0 3538 chr17 38421174 38421174 1 + C T rs151273872 38421174 + 38421154 38421194 41 ACCAAGTGGCCAGTCTCTGGCTCCTCCTCCTCCGCCTTACC ACCAAGTGGCCAGTCTCTGGTTCCTCCTCCTCCGCCTTACC Direct Gain 0 0.957580163614358 0 0.998723149299622 prediction 0.915160327228717 Functional Gain - WIPF2 ENSG00000171475 CDS Human protein_coding chr17:38421174 chr17:38421174 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104578 0 0 1 0 0 Ribosome 0 0.438718550664673 0.997446298599244 0 hPsi_site_3538 iPseU_CNN:0.997446298599244;iRNA_PseU:0 3539 chrX 153421876 153421876 1 + C A OV 153421876 - 153421856 153421896 41 GCAAAGCATGCGAAGAAGGTGTAGGGTCCCCAGCAGACGCA GCAAAGCATGCGAAGAAGGTTTAGGGTCCCCAGCAGACGCA Direct Gain 0 0.957572545081311 0 0.996647119522095 prediction 0.915145090162622 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153421876 chrX:153421876 stopgain 0.978 1 21 hPsi_associated_SNPs_104579 0 0 0 0 0 unknown 0 0.438714215298853 0.99329423904419 0 hPsi_site_3539 iPseU_CNN:0.99329423904419;iRNA_PseU:0 3540 chr12 110940516 110940516 1 + G A rs140144966 110940516 - 110940496 110940536 41 GGTTAATGCTGTTCTCTTGGCACAAAAATACTTTTACTGTC GGTTAATGCTGTTCTCTTGGTACAAAAATACTTTTACTGTC Direct Gain 0 0.957568705209676 0 0.998823285102844 prediction 0.915137410419352 Functional Gain - RAD9B ENSG00000151164 intronic Human protein_coding chr12:110940516 chr12:110940516 . . 0 21 hPsi_associated_SNPs_104580 0 0 0 0 0 exosome 0 0.438781980007649 0.997646570205688 0 hPsi_site_3540 iPseU_CNN:0.997646570205688;iRNA_PseU:0 3541 chr19 49514275 49514275 1 + G A rs16981038 49514275 - 49514255 49514295 41 ATCTGCTCACGGACTTCTGACTTGATCTCCCCTGTGTCACC ATCTGCTCACGGACTTCTGATTTGATCTCCCCTGTGTCACC Direct Gain 0 0.957567326447825 0 0.999088406562805 prediction 0.91513465289565 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49514275 chr19:49514275 synonymous SNV . 0 21 hPsi_associated_SNPs_104581 0 0 0 0 0 chromatin 0 0.438843001533717 0.99817681312561 0 hPsi_site_3541 iPseU_CNN:0.99817681312561;iRNA_PseU:0 3542 chr3 136045688 136045688 1 + C T LUSC 136045688 + 136045668 136045708 41 GTGAAAGGGGCTCGTTTTGTCAGATTCTGTGATGCATTCAA GTGAAAGGGGCTCGTTTTGTTAGATTCTGTGATGCATTCAA Direct Gain 0 0.957564307111891 0 0.999802708625793 prediction 0.915128614223782 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:136045688 chr3:136045688 synonymous SNV . 0 21 hPsi_associated_SNPs_104582 0 0 1 0 2 Ribosome 0 0.438720389418748 0.999605417251586 0 hPsi_site_3542 iPseU_CNN:0.999605417251586;iRNA_PseU:0 3543 chr5 112327826 112327826 1 + C T SKCM 112327826 + 112327806 112327846 41 CACTATTTATACTCTTCAGTCATTGTCCGTTTTTGCTGCCT CACTATTTATACTCTTCAGTTATTGTCCGTTTTTGCTGCCT Direct Gain 0 0.957560718418657 0 0.996471762657166 prediction 0.915121436837313 Functional Gain - DCP2 ENSG00000172795 CDS Human protein_coding chr5:112327826 chr5:112327826 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_104583 0 0 1 0 0 Ribosome 0 0.438682041513672 0.992943525314332 0 hPsi_site_3543 iPseU_CNN:0.992943525314332;iRNA_PseU:0 3544 chr10 6264883 6264883 1 + G A rs2230272 6264883 - 6264863 6264903 41 GCCTGGTGGCAGATGACCAGCACATTCTCCTGCCGCTCCAG GCCTGGTGGCAGATGACCAGTACATTCTCCTGCCGCTCCAG Direct Gain 0 0.957558363283515 0 0.999967992305756 prediction 0.91511672656703 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6264883 chr10:6264883 synonymous SNV . 0 21 hPsi_associated_SNPs_104584 0 0 0 0 0 Ribosome 0 0.438705537716902 0.999935984611512 0 hPsi_site_3544 iPseU_CNN:0.999935984611512;iRNA_PseU:0 3545 chr4 42895308 42895308 1 + G A rs78136490 42895308 - 42895288 42895328 41 TTTCCGTGGCCTGTCACTTTCTGGCTTCATCTCCCTTTTAA TTTCCGTGGCCTGTCACTTTTTGGCTTCATCTCCCTTTTAA Direct Gain 0 0.957550385569731 0 5.83231449127197e-05 prediction 0.915100771139462 Functional Gain - GRXCR1 ENSG00000215203 CDS Human protein_coding chr4:42895308 chr4:42895308 nonsynonymous SNV 0.596 1 21 hPsi_associated_SNPs_104585 2 0 0 0 0 unknown 0 0.438665980633993 0 0 hPsi_site_3545 iPseU_CNN:0;iRNA_PseU:0 3546 chr1 161683116 161683116 1 + G A rs61741808 161683116 - 161683096 161683136 41 CGGTGGCCAGATAATTCCCTCAACTCCATGAGCAGGTGACC CGGTGGCCAGATAATTCCCTTAACTCCATGAGCAGGTGACC Direct Gain 0 0.957549510191296 0 0.934695839881897 prediction 0.915099020382591 Functional Gain - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161683116 chr1:161683116 synonymous SNV . 0 21 hPsi_associated_SNPs_104586 0 0 0 0 0 Endoplasmic reticulum 0 0.438718589636103 0.869391679763794 0 hPsi_site_3546 iPseU_CNN:0.869391679763794;iRNA_PseU:0 3547 chr11 93454543 93454543 1 + G A rs74976465 93454543 - 93454523 93454563 41 CACAGTTGGACCCAAATATGCATGTTCTTCCTCCACAGCAT CACAGTTGGACCCAAATATGTATGTTCTTCCTCCACAGCAT Direct Gain 0 0.957546991489349 0 0.988412976264954 prediction 0.915093982978698 Functional Gain - CEP295 ENSG00000166004 CDS Human protein_coding chr11:93454543 chr11:93454543 nonsynonymous SNV 0.005 0 21 hPsi_associated_SNPs_104587 0 0 0 0 0 Nucleus 0 0.43865586093651 0.976825952529908 0 hPsi_site_3547 iPseU_CNN:0.976825952529908;iRNA_PseU:0 3548 chr5 167826567 167826567 1 + G A BLCA 167826567 - 167826547 167826587 41 GCAGGGTGTACTTACTTCTTCAGGGTCTGAAAGCCACGCTC GCAGGGTGTACTTACTTCTTTAGGGTCTGAAAGCCACGCTC Direct Gain 0 0.957545849629025 0 0.912169873714447 prediction 0.915091699258051 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167826567 chr5:167826567 synonymous SNV . 0 21 hPsi_associated_SNPs_104588 0 0 0 0 0 Ribosome 0 0.438717125244965 0.824339747428894 0 hPsi_site_3548 iPseU_CNN:0.824339747428894;iRNA_PseU:0 3549 chr15 83788365 83788365 1 + G T UCEC 83788365 + 83788345 83788385 41 AACACCGCATATGGGCACATGATCTGCTACTGGGATGGCTC AACACCGCATATGGGCACATTATCTGCTACTGGGATGGCTC Direct Gain 0 0.957528360475988 0 0.987693011760712 prediction 0.915056720951977 Functional Gain - TM6SF1 ENSG00000136404 CDS Human protein_coding chr15:83788365 chr15:83788365 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104589 0 0 1 1 1 chromatin 0 0.438731651523039 0.975386023521424 0 hPsi_site_3549 iPseU_CNN:0.975386023521424;iRNA_PseU:0 3550 chr12 73056875 73056875 1 + C T LUSC 73056875 + 73056855 73056895 41 TGATGGGGTAGCTGCTGCTTCTTTCTCACGAGCTGTGGAAA TGATGGGGTAGCTGCTGCTTTTTTCTCACGAGCTGTGGAAA Direct Gain 0 0.957524990177168 0 0.961531758308411 prediction 0.915049980354335 Functional Gain - TRHDE ENSG00000072657 CDS Human protein_coding chr12:73056875 chr12:73056875 nonsynonymous SNV 0.770 4 21 hPsi_associated_SNPs_104590 0 0 0 0 1 exosome 0 0.438718594524682 0.923063516616822 0 hPsi_site_3550 iPseU_CNN:0.923063516616822;iRNA_PseU:0 3551 chr14 90651308 90651308 1 + C T SKCM 90651308 + 90651288 90651328 41 GGGGTGGGAGCCTTTGCAATCATGAACAACAGGTTGGCAGA GGGGTGGGAGCCTTTGCAATTATGAACAACAGGTTGGCAGA Direct Gain 0 0.957522545756374 0 0.999800503253937 prediction 0.915045091512748 Functional Gain - KCNK13 ENSG00000152315 CDS Human protein_coding chr14:90651308 chr14:90651308 synonymous SNV . 0 21 hPsi_associated_SNPs_104591 0 0 0 0 0 exosome 0 0.438718592234186 0.999601006507874 0 hPsi_site_3551 iPseU_CNN:0.999601006507874;iRNA_PseU:0 3552 chr9 5629133 5629133 1 + G A rs4471106 5629133 - 5629113 5629153 41 GCAAGGCTGCGCGACGAAGGCACCCCCAAGCTGACGGGGCC GCAAGGCTGCGCGACGAAGGTACCCCCAAGCTGACGGGGCC Direct Gain 0 0.957511841234528 0 1 prediction 0.915023682469056 Functional Gain - RIC1 ENSG00000107036 UTR5 Human protein_coding chr9:5629133 chr9:5629133 . . 0 21 hPsi_associated_SNPs_104592 0 0 0 0 0 Nucleus 0 0.438718592277766 1 0 hPsi_site_3552 iPseU_CNN:1;iRNA_PseU:0 3553 chr2 26801163 26801163 1 + G A rs80103058 26801163 - 26801143 26801183 41 CACTGACCTCCCAGGCCAGGCACCACCCACCACCCTACCCC CACTGACCTCCCAGGCCAGGTACCACCCACCACCCTACCCC Direct Gain 0 0.957508027115513 0 0.97542017698288 prediction 0.915016054231026 Functional Gain - C2orf70 ENSG00000173557 intronic Human protein_coding chr2:26801163 chr2:26801163 . . 0 21 hPsi_associated_SNPs_104593 0 0 0 0 0 exosome 0 0.438718592555987 0.95084035396576 0 hPsi_site_3553 iPseU_CNN:0.95084035396576;iRNA_PseU:0 3554 chr11 57948110 57948110 1 + C T rs143205795 57948110 + 57948090 57948130 41 CCTGTGCAATCCAAATATGGCACACTTCACCTGTCTGTGAT CCTGTGCAATCCAAATATGGTACACTTCACCTGTCTGTGAT Direct Gain 0 0.957497322750569 0 0.999543726444244 prediction 0.914994645501138 Functional Gain - OR9Q1 ENSG00000186509 UTR3 Human protein_coding chr11:57948110 chr11:57948110 . . 0 21 hPsi_associated_SNPs_104594 0 0 0 1 0 nucleus 0 0.438716426186885 0.999087452888488 0 hPsi_site_3554 iPseU_CNN:0.999087452888488;iRNA_PseU:0 3555 chr15 23811883 23811883 1 + C A UCEC 23811883 - 23811863 23811903 41 TTGGGGTTGGCCTTCTCATAGACAACCTCCATGCAGATGCC TTGGGGTTGGCCTTCTCATATACAACCTCCATGCAGATGCC Direct Gain 0 0.957494279005359 0 0.632529437541962 prediction 0.914988558010718 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811883 chr15:23811883 synonymous SNV . 0 21 hPsi_associated_SNPs_104595 0 0 0 0 0 chromatin 0 0.438718593005729 0.265058875083924 0 hPsi_site_3555 iPseU_CNN:0.265058875083924;iRNA_PseU:0 3556 chr10 105185029 105185029 1 + G A CESC 105185029 - 105185009 105185049 41 AGTCAGAGCTGGATCCACTTCTTCATCCTCATCAACTGTCT AGTCAGAGCTGGATCCACTTTTTCATCCTCATCAACTGTCT Direct Gain 0 0.95747988545697 0 0.576281607151031 prediction 0.914959770913939 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105185029 chr10:105185029 nonsynonymous SNV 0.561 1 21 hPsi_associated_SNPs_104596 0 0 0 0 0 Nucleus 0 0.438664821361541 0.152563214302062 0 hPsi_site_3556 iPseU_CNN:0.152563214302062;iRNA_PseU:0 3557 chr17 5334145 5334145 1 + C T rs143728578 5334145 + 5334125 5334165 41 TAGTAAGGTGAACAGTGAGTCATCCACACAGATTATAATGG TAGTAAGGTGAACAGTGAGTTATCCACACAGATTATAATGG Direct Gain 0 0.957477311024128 0 0.239117532968521 prediction 0.914954622048256 Functional Gain - RPAIN ENSG00000263272 ncRNA_intronic Human antisense chr17:5334145 chr17:5334145 . . 0 21 hPsi_associated_SNPs_104597 0 0 0 0 0 Ribosome 0 0.438703505498542 0 0 hPsi_site_3557 iPseU_CNN:0;iRNA_PseU:0 3558 chr6 84233979 84233979 1 + G A LIHC 84233979 - 84233959 84233999 41 AGAAGAGCATAGTCATAGTCCAAGGTAGCGTCCCCCATGCC AGAAGAGCATAGTCATAGTCTAAGGTAGCGTCCCCCATGCC Direct Gain 0 0.957461976779386 0 0.566786468029022 prediction 0.914923953558771 Functional Gain - PRSS35 ENSG00000146250 CDS Human protein_coding chr6:84233979 chr6:84233979 synonymous SNV . 0 21 hPsi_associated_SNPs_104598 0 0 0 0 0 exosome 0 0.43871852679923 0.133572936058044 0 hPsi_site_3558 iPseU_CNN:0.133572936058044;iRNA_PseU:0 3559 chr16 50820406 50820406 1 + C T rs13337656 50820406 + 50820386 50820426 41 GTTGGCCAGGTGTGGTGGCGCACACCTGTAATCCCAGCACT GTTGGCCAGGTGTGGTGGCGTACACCTGTAATCCCAGCACT Direct Gain 0 0.957459197660578 0 0.998370170593262 prediction 0.914918395321157 Functional Gain - CYLD ENSG00000260616 ncRNA_intronic Human antisense chr16:50820406 chr16:50820406 . . 0 21 hPsi_associated_SNPs_104599 0 0 0 0 0 Ribosome 0 0.43823917695291 0.996740341186524 0 hPsi_site_3559 iPseU_CNN:0.996740341186524;iRNA_PseU:0 3560 chr19 40097944 40097944 1 + G T COAD 40097944 + 40097924 40097964 41 AGATGGTGCAAGTGTCGAGAGATATCTCCCTGACCTCAGTG AGATGGTGCAAGTGTCGAGATATATCTCCCTGACCTCAGTG Direct Gain 0 0.957455743803996 0 0.402921169996262 prediction 0.914911487607992 Functional Gain - LGALS13 ENSG00000105198 CDS Human protein_coding chr19:40097944 chr19:40097944 nonsynonymous SNV 0.003 3 21 hPsi_associated_SNPs_104600 0 0 0 0 1 unknown 0 0.438706782359077 0 0 hPsi_site_3560 iPseU_CNN:0;iRNA_PseU:0 3561 chrX 64959621 64959621 1 + G T KIRC 64959621 + 64959601 64959641 41 CGGAGCTGGCCAATGCCAGAGATGAGTCCAAGAAGACTGCC CGGAGCTGGCCAATGCCAGATATGAGTCCAAGAAGACTGCC Direct Gain 0 0.95744530343947 0 0.998718500137329 prediction 0.91489060687894 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64959621 chrX:64959621 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_104601 0 0 1 0 1 Ribosome 0 0.438456714807886 0.997437000274658 0 hPsi_site_3561 iPseU_CNN:0.997437000274658;iRNA_PseU:0 3562 chr20 31812208 31812208 1 + C A rs113989803 31812208 - 31812188 31812228 41 AGAACCACTCCTTATGGAATGATATCTGGATCCCACCACAG AGAACCACTCCTTATGGAATTATATCTGGATCCCACCACAG Direct Gain 0 0.957444975857264 0 0.999426960945129 prediction 0.914889951714529 Functional Gain - BPIFA3 ENSG00000131059 CDS Human protein_coding chr20:31812208 chr20:31812208 stopgain 0.839 0 21 hPsi_associated_SNPs_104602 0 0 0 0 0 unknown 0 0.438730198774145 0.998853921890258 0 hPsi_site_3562 iPseU_CNN:0.998853921890258;iRNA_PseU:0 3563 chr19 55815961 55815961 1 + G A SKCM 55815961 - 55815941 55815981 41 GGAGCCCCCGCCTCGAGCCTCATCTCCAGCCCCCGGCTCCG GGAGCCCCCGCCTCGAGCCTTATCTCCAGCCCCCGGCTCCG Direct Gain 0 0.957444094980698 0 0.999989688396454 prediction 0.914888189961396 Functional Gain - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55815961 chr19:55815961 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_104603 0 0 0 0 0 chromatin 0 0.438700542999049 0.999979376792908 0 hPsi_site_3563 iPseU_CNN:0.999979376792908;iRNA_PseU:0 3564 chr1 55072931 55072931 1 + G A BLCA 55072931 - 55072911 55072951 41 GATAGGCACACACCCATTGTCACAAGGCTTCCGCCTCGAGG GATAGGCACACACCCATTGTTACAAGGCTTCCGCCTCGAGG Direct Gain 0 0.957441760089364 0 0.999999642372131 prediction 0.914883520178727 Functional Gain - ACOT11 ENSG00000162390 CDS Human protein_coding chr1:55072931 chr1:55072931 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104604 0 0 0 0 0 chromatin 0 0.438718592995052 0.999999284744262 0 hPsi_site_3564 iPseU_CNN:0.999999284744262;iRNA_PseU:0 3565 chr1 12056237 12056237 1 + G A BLCA 12056237 - 12056217 12056257 41 TCCCAGAGCATGGCATTGATCACGGTGCTCTTCCCATTGCT TCCCAGAGCATGGCATTGATTACGGTGCTCTTCCCATTGCT Direct Gain 0 0.957440941503309 0 0.988101243972778 prediction 0.914881883006618 Functional Gain - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12056237 chr1:12056237 synonymous SNV . 0 21 hPsi_associated_SNPs_104605 0 0 0 0 0 Ribosome 0 0.438723147772556 0.976202487945556 0 hPsi_site_3565 iPseU_CNN:0.976202487945556;iRNA_PseU:0 3566 chr16 21721247 21721247 1 + G A CESC 21721247 - 21721227 21721267 41 CCCAGGGTCTCATTGAGGGTCTGGTTCTCCATGGCAATGTC CCCAGGGTCTCATTGAGGGTTTGGTTCTCCATGGCAATGTC Direct Gain 0 0.957438507498904 0 0.999998092651367 prediction 0.914877014997808 Functional Gain - OTOA ENSG00000155719 CDS Human protein_coding chr16:21721247 chr16:21721247 synonymous SNV . 0 21 hPsi_associated_SNPs_104606 0 0 0 0 0 exosome 0 0.438707407009117 0.999996185302734 0 hPsi_site_3566 iPseU_CNN:0.999996185302734;iRNA_PseU:0 3567 chr3 32927521 32927521 1 + G A BLCA 32927521 - 32927501 32927541 41 TCGCGTTCCTCCAGGGCTTTCTTATGCCTCGCCGTCACGGC TCGCGTTCCTCCAGGGCTTTTTTATGCCTCGCCGTCACGGC Direct Gain 0 0.957437766964082 0 0.978625059127808 prediction 0.914875533928165 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32927521 chr3:32927521 synonymous SNV . 0 21 hPsi_associated_SNPs_104607 0 0 0 0 0 cytosol 0 0.438718650399061 0.957250118255616 0 hPsi_site_3567 iPseU_CNN:0.957250118255616;iRNA_PseU:0 3568 chr12 123335823 123335823 1 + G A UCEC 123335823 - 123335803 123335843 41 TGATTCAGAAAGCTTCAGCTCACAATCCATGTAATCAAACA TGATTCAGAAAGCTTCAGCTTACAATCCATGTAATCAAACA Direct Gain 0 0.957434759080586 0 0.998910307884216 prediction 0.914869518161172 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123335823 chr12:123335823 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104608 0 0 0 0 0 Nucleus 0 0.439789335168729 0.997820615768432 0 hPsi_site_3568 iPseU_CNN:0.997820615768432;iRNA_PseU:0 3569 chr19 33795107 33795107 1 + C A rs116624689 33795107 - 33795087 33795127 41 ATATTTATTTAACGTATCTGGTTTTTACTCCCTCCCGTCCA ATATTTATTTAACGTATCTGTTTTTTACTCCCTCCCGTCCA Direct Gain 0 0.957434528129962 0 0.995181083679199 prediction 0.914869056259925 Functional Gain - CEBPA-AS1 ENSG00000178863;ENSG00000267296 ncRNA_exonic Human other chr19:33795107 chr19:33795107 . . 0 21 hPsi_associated_SNPs_104609 0 0 0 0 0 unknown 0 0.438718595825706 0.990362167358398 0 hPsi_site_3569 iPseU_CNN:0.990362167358398;iRNA_PseU:0 3570 chr12 102056230 102056230 1 + G A LUSC 102056230 - 102056210 102056250 41 TCATAGGCCACACCTTCAATCATCTTCTTGGGCTCAAAAGT TCATAGGCCACACCTTCAATTATCTTCTTGGGCTCAAAAGT Direct Gain 0 0.957433125704613 0 0.89417552947998 prediction 0.914866251409227 Functional Gain - MYBPC1 ENSG00000196091 CDS Human protein_coding chr12:102056230 chr12:102056230 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104610 0 0 0 0 0 nucleus 0 0.438375100775089 0.78835105895996 0 hPsi_site_3570 iPseU_CNN:0.78835105895996;iRNA_PseU:0 3571 chr5 82817894 82817894 1 + C T SKCM 82817894 + 82817874 82817914 41 TCATTGGAGAATCAACATCTCATGTTCCTCCCACTACCCTT TCATTGGAGAATCAACATCTTATGTTCCTCCCACTACCCTT Direct Gain 0 0.957416147200301 0 0.995392441749573 prediction 0.914832294400601 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82817894 chr5:82817894 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_104611 0 0 0 0 0 Ribosome 0 0.438719374921532 0.990784883499146 0 hPsi_site_3571 iPseU_CNN:0.990784883499146;iRNA_PseU:0 3572 chr6 158922910 158922910 1 + G A LUSC 158922910 - 158922890 158922930 41 TGGGTACTGGGTGGCACTGTCACCTGCATGTTCTGCTGTCC TGGGTACTGGGTGGCACTGTTACCTGCATGTTCTGCTGTCC Direct Gain 0 0.957409601950629 0 0.999994277954102 prediction 0.914819203901258 Functional Gain - TULP4 ENSG00000130338 CDS Human protein_coding chr6:158922910 chr6:158922910 nonsynonymous SNV 0.714 2 21 hPsi_associated_SNPs_104612 0 0 0 0 0 Ribosome 0 0.438684144468571 0.999988555908204 0 hPsi_site_3572 iPseU_CNN:0.999988555908204;iRNA_PseU:0 3573 chr19 50093900 50093900 1 + C T rs569865244 50093900 + 50093880 50093920 41 CTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGGTAGG CTGACCGTGAGGGCACTGGTTAGTTCCGCCCCCGTGGTAGG Direct Gain 0 0.957403789881721 0 0.999189257621765 prediction 0.914807579763442 Functional Gain - PRRG2 ENSG00000126460 UTR3 Human protein_coding chr19:50093900 chr19:50093900 . . 0 21 hPsi_associated_SNPs_104613 0 0 0 0 0 Ribosome 0 0.438718592994718 0.99837851524353 0 hPsi_site_3573 iPseU_CNN:0.99837851524353;iRNA_PseU:0 3574 chr9 90301573 90301573 1 + G T STAD 90301573 + 90301553 90301593 41 AAGGGATGCTGGAGGTGTTTGTGGCCCCGACCCACCACCCG AAGGGATGCTGGAGGTGTTTTTGGCCCCGACCCACCACCCG Direct Gain 0 0.957403250203265 0 5.09321689605713e-05 prediction 0.914806500406529 Functional Gain - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90301573 chr9:90301573 nonsynonymous SNV 0.974 3 21 hPsi_associated_SNPs_104614 0 0 0 0 1 Ribosome 0 0.438718222611747 0 0 hPsi_site_3574 iPseU_CNN:0;iRNA_PseU:0 3575 chr19 10394332 10394332 1 + C T CESC 10394332 + 10394312 10394352 41 GTGGGGGAGCCCGCTGAGGTCACGACCACGGTGCTGGTGAG GTGGGGGAGCCCGCTGAGGTTACGACCACGGTGCTGGTGAG Direct Gain 0 0.957398976077752 0 0.999950528144836 prediction 0.914797952155503 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394332 chr19:10394332 synonymous SNV . 0 21 hPsi_associated_SNPs_104615 0 0 1 0 0 Nucleus 0 0.438722251153559 0.999901056289672 0 hPsi_site_3575 iPseU_CNN:0.999901056289672;iRNA_PseU:0 3576 chr1 24790531 24790531 1 + C T STAD 24790531 + 24790511 24790551 41 CGCAGGTGCCTCATTGCATTCTTGGGCGTCTTCTTAATCAC CGCAGGTGCCTCATTGCATTTTTGGGCGTCTTCTTAATCAC Direct Gain 0 0.957391053512585 0 0.948199152946472 prediction 0.91478210702517 Functional Gain - NIPAL3 ENSG00000001461 CDS Human protein_coding chr1:24790531 chr1:24790531 synonymous SNV . 0 21 hPsi_associated_SNPs_104616 0 0 1 0 2 Endoplasmic reticulum 0 0.438717699287945 0.896398305892944 0 hPsi_site_3576 iPseU_CNN:0.896398305892944;iRNA_PseU:0 3577 chr6 50810907 50810907 1 + C T CESC 50810907 + 50810887 50810927 41 CCGGGGATCCAGAGCTGCCTCACGCACTTCAGCCTCATCAC CCGGGGATCCAGAGCTGCCTTACGCACTTCAGCCTCATCAC Direct Gain 0 0.957391001079296 0 0.999716401100159 prediction 0.914782002158592 Functional Gain - TFAP2B ENSG00000008196 CDS Human protein_coding chr6:50810907 chr6:50810907 synonymous SNV . 0 21 hPsi_associated_SNPs_104617 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859299679 0.999432802200318 0 hPsi_site_3577 iPseU_CNN:0.999432802200318;iRNA_PseU:0 3578 chr2 1156954 1156954 1 + C A rs181446326 1156954 - 1156934 1156974 41 GATGCGCTCTCTTTTTTTTTGACTGTCATCCAGGCTGGAAG GATGCGCTCTCTTTTTTTTTTACTGTCATCCAGGCTGGAAG Direct Gain 0 0.957385339059953 0 0.942995548248291 prediction 0.914770678119907 Functional Gain - SNTG2 ENSG00000172554 UTR3 Human protein_coding chr2:1156954 chr2:1156954 . . 0 21 hPsi_associated_SNPs_104618 0 0 0 0 0 exosome 0 0.438717021673073 0.885991096496582 0 hPsi_site_3578 iPseU_CNN:0.885991096496582;iRNA_PseU:0 3579 chr16 88705630 88705630 1 + C T CESC 88705630 + 88705610 88705650 41 GGGGAGGCACGAGAGGCCCTCAGCTACGACCCAGTGCCCGG GGGGAGGCACGAGAGGCCCTTAGCTACGACCCAGTGCCCGG Direct Gain 0 0.957381160154216 0 0.999364852905273 prediction 0.914762320308432 Functional Gain - IL17C ENSG00000124391 CDS Human protein_coding chr16:88705630 chr16:88705630 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104619 0 0 0 0 1 exosome 0 0.438718726241143 0.998729705810546 0 hPsi_site_3579 iPseU_CNN:0.998729705810546;iRNA_PseU:0 3580 chr16 57065331 57065331 1 + C T BLCA 57065331 + 57065311 57065351 41 TGCAGGGAGGCGGACCTCATCTTCCTTCTTTCCCCGCCCAC TGCAGGGAGGCGGACCTCATTTTCCTTCTTTCCCCGCCCAC Direct Gain 0 0.957377335768303 0 0.990811109542847 prediction 0.914754671536606 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57065331 chr16:57065331 synonymous SNV . 0 21 hPsi_associated_SNPs_104620 0 0 1 0 2 Ribosome 0 0.438718592992705 0.981622219085694 0 hPsi_site_3580 iPseU_CNN:0.981622219085694;iRNA_PseU:0 3581 chr11 60703815 60703815 1 + G A rs139210234 60703815 - 60703795 60703835 41 ACATGCTGAGGGGCAGGGACCATCTCCTCCTCCTCTTCCTC ACATGCTGAGGGGCAGGGACTATCTCCTCCTCCTCTTCCTC Direct Gain 0 0.957374302222616 0 0.940681219100952 prediction 0.914748604445232 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703815 chr11:60703815 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_104621 0 0 0 0 0 Ribosome 0 0.438693060742129 0.881362438201904 0 hPsi_site_3581 iPseU_CNN:0.881362438201904;iRNA_PseU:0 3582 chr11 68370823 68370823 1 + G A rs35387680 68370823 - 68370803 68370843 41 TCAGAGCTGGCTTCCATGGCCACACTGCCTGCCGCTGAAAA TCAGAGCTGGCTTCCATGGCTACACTGCCTGCCGCTGAAAA Direct Gain 0 0.957372929631782 0 0.000993221998214722 prediction 0.914745859263564 Functional Gain - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68370823 chr11:68370823 synonymous SNV . 0 21 hPsi_associated_SNPs_104622 0 0 0 0 0 Nucleus 0 0.438727643282163 0 0 hPsi_site_3582 iPseU_CNN:0;iRNA_PseU:0 3583 chr17 4799553 4799553 1 + C T rs75741630 4799553 + 4799533 4799573 41 GTAGAGGAGGGGCAGCGGCTCAAGGTCATCTATGGCTCCAG GTAGAGGAGGGGCAGCGGCTTAAGGTCATCTATGGCTCCAG Direct Gain 0 0.957370582168425 0 0.999999463558197 prediction 0.914741164336849 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799553 chr17:4799553 synonymous SNV . 0 21 hPsi_associated_SNPs_104623 0 0 1 0 2 Ribosome 0 0.438718302195449 0.999998927116394 0 hPsi_site_3583 iPseU_CNN:0.999998927116394;iRNA_PseU:0 3584 chr2 172950497 172950497 1 + C A UCEC 172950497 - 172950477 172950517 41 CGTGGGACATGGGAGAAGGAGACATTTGCTGGTTGGGCGGC CGTGGGACATGGGAGAAGGATACATTTGCTGGTTGGGCGGC Direct Gain 0 0.957358049825125 0 0.998346328735352 prediction 0.914716099650251 Functional Gain - DLX1 ENSG00000144355 CDS Human protein_coding chr2:172950497 chr2:172950497 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_104624 0 0 0 0 0 exosome 0 0.38657119104457 0.996692657470704 0 hPsi_site_3584 iPseU_CNN:0.996692657470704;iRNA_PseU:0 3585 chr17 1637119 1637119 1 + G T SARC 1637119 + 1637099 1637139 41 GGCGGGGGCCTGGGCAGCGGGAGCGACGACAACGCCCTGAA GGCGGGGGCCTGGGCAGCGGTAGCGACGACAACGCCCTGAA Direct Gain 0 0.957357543284609 0 0.999999761581421 prediction 0.914715086569217 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1637119 chr17:1637119 synonymous SNV . 0 21 hPsi_associated_SNPs_104625 0 0 1 0 0 Endoplasmic reticulum 0 0.438717402317747 0.999999523162842 0 hPsi_site_3585 iPseU_CNN:0.999999523162842;iRNA_PseU:0 3586 chr16 2028358 2028358 1 + C T SKCM 2028358 + 2028338 2028378 41 CGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCC CGTGGAACACCAACTCGCGGTACTGCCACGAGGCCCAGGCC Direct Gain 0 0.95735485399969 0 0.999830663204193 prediction 0.91470970799938 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2028358 chr16:2028358 nonsynonymous SNV 0.473 4 21 hPsi_associated_SNPs_104626 0 0 0 4 2 Nucleus 0 0.438698263439598 0.999661326408386 0 hPsi_site_3586 iPseU_CNN:0.999661326408386;iRNA_PseU:0 3587 chr11 7673015 7673015 1 + G A rs5864 7673015 - 7672995 7673035 41 GAGGCCATTTTCTCTCGCTTCTCCTGTTCAGCCTCCGGACC GAGGCCATTTTCTCTCGCTTTTCCTGTTCAGCCTCCGGACC Direct Gain 0 0.957347906836286 0 0.943999350070953 prediction 0.914695813672572 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7673015 chr11:7673015 synonymous SNV . 0 21 hPsi_associated_SNPs_104627 0 0 0 0 0 Cytosol 0 0.438716899162915 0.887998700141906 0 hPsi_site_3587 iPseU_CNN:0.887998700141906;iRNA_PseU:0 3588 chrX 135290072 135290072 1 + G T LUAD 135290072 + 135290052 135290092 41 GGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTT GGGGAGGACTTCTACTGCGTTACTTGCCATGAGACCAAGTT Direct Gain 0 0.957345012140746 0 0.99999988079071 prediction 0.914690024281492 Functional Gain - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135290072 chrX:135290072 synonymous SNV . 0 21 hPsi_associated_SNPs_104628 0 0 1 0 1 chromatin 0 0.438660365604913 0.99999976158142 0 hPsi_site_3588 iPseU_CNN:0.99999976158142;iRNA_PseU:0 3589 chr10 50151404 50151404 1 + C T CESC 50151404 + 50151384 50151424 41 ATCAGCAATTTTGAGTATCTCATGTACCTCAACACCGCGGC ATCAGCAATTTTGAGTATCTTATGTACCTCAACACCGCGGC Direct Gain 0 0.957338857571616 0 0.944890797138214 prediction 0.914677715143232 Functional Gain - WDFY4 ENSG00000128815 CDS Human protein_coding chr10:50151404 chr10:50151404 synonymous SNV . 0 21 hPsi_associated_SNPs_104629 0 0 0 0 2 exosome 0 0.438347419491575 0.889781594276428 0 hPsi_site_3589 iPseU_CNN:0.889781594276428;iRNA_PseU:0 3590 chr10 111883838 111883838 1 + G T COAD 111883838 + 111883818 111883858 41 AGAAGCCTAGGCACAAGAGTGATGTGGAAATCCCAGCAACT AGAAGCCTAGGCACAAGAGTTATGTGGAAATCCCAGCAACT Direct Gain 0 0.957332891774117 0 0.987942159175873 prediction 0.914665783548234 Functional Gain - ADD3 ENSG00000148700 CDS Human protein_coding chr10:111883838 chr10:111883838 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104630 0 0 1 0 1 Ribosome 0 0.438718482930959 0.975884318351746 0 hPsi_site_3590 iPseU_CNN:0.975884318351746;iRNA_PseU:0 3591 chr2 133175182 133175182 1 + C A HNSC 133175182 - 133175162 133175202 41 GTGCTGGAGCGGTTGCAAGTGAGACCCCGGTGGCTGGGCAC GTGCTGGAGCGGTTGCAAGTTAGACCCCGGTGGCTGGGCAC Direct Gain 0 0.957329855385218 0 0.99998939037323 prediction 0.914659710770437 Functional Gain - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133175182 chr2:133175182 synonymous SNV . 0 21 hPsi_associated_SNPs_104631 0 0 0 0 0 nucleus 0 0.438714793857784 0.99997878074646 0 hPsi_site_3591 iPseU_CNN:0.99997878074646;iRNA_PseU:0 3592 chr12 7043646 7043646 1 + G A UCEC 7043646 - 7043626 7043666 41 GTTGACCTTTGGGGTGGAGGCTTCCTCTACTCGGGCCTTCT GTTGACCTTTGGGGTGGAGGTTTCCTCTACTCGGGCCTTCT Direct Gain 0 0.9573273317402 0 0.983556687831879 prediction 0.914654663480401 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7043646 chr12:7043646 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_104632 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592988983 0.967113375663758 0 hPsi_site_3592 iPseU_CNN:0.967113375663758;iRNA_PseU:0 3593 chr6 70919384 70919384 1 + C T rs117232254 70919384 + 70919364 70919404 41 AAGTGGACTTGTCACAATGACACAAACTCATTTTTTGTAAC AAGTGGACTTGTCACAATGATACAAACTCATTTTTTGTAAC Direct Gain 0 0.957320655417143 0 0.999967813491821 prediction 0.914641310834286 Functional Gain - COL19A1 ENSG00000082293 UTR3 Human protein_coding chr6:70919384 chr6:70919384 . . 0 21 hPsi_associated_SNPs_104633 0 0 0 1 0 exosome 0 0.439007557896199 0.999935626983642 0 hPsi_site_3593 iPseU_CNN:0.999935626983642;iRNA_PseU:0 3594 chr14 100610522 100610522 1 + C T rs377656813 100610522 + 100610502 100610542 41 ATGGTGTTGAAACTGTCTGTCATGCACCACGGTGTCTGTGT ATGGTGTTGAAACTGTCTGTTATGCACCACGGTGTCTGTGT Direct Gain 0 0.957312200506846 0 0.99936455488205 prediction 0.914624401013692 Functional Gain - EVL ENSG00000196405 UTR3 Human protein_coding chr14:100610522 chr14:100610522 . . 0 21 hPsi_associated_SNPs_104634 0 0 1 0 0 chromatin 0 0.437790118651466 0.9987291097641 0 hPsi_site_3594 iPseU_CNN:0.9987291097641;iRNA_PseU:0 3595 chrX 153033715 153033715 1 + G T UCEC 153033715 + 153033695 153033735 41 GCCACGTAGGATTCCCCCGAGTCGTACCCCTGTGGCGACGA GCCACGTAGGATTCCCCCGATTCGTACCCCTGTGGCGACGA Direct Gain 0 0.957311798264575 0 0.999842345714569 prediction 0.914623596529149 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153033715 chrX:153033715 nonsynonymous SNV 0.871 0 21 hPsi_associated_SNPs_104635 0 0 0 0 1 Endoplasmic reticulum 0 0.438719344194341 0.999684691429138 0 hPsi_site_3595 iPseU_CNN:0.999684691429138;iRNA_PseU:0 3596 chr4 187171550 187171550 1 + C T SARC 187171550 + 187171530 187171570 41 AAATGTATGGAAAATCGAGTCACAAAGGCGAGTATGCATGG AAATGTATGGAAAATCGAGTTACAAAGGCGAGTATGCATGG Direct Gain 0 0.957309028436898 0 0.861479640007019 prediction 0.914618056873797 Functional Gain - KLKB1 ENSG00000164344 CDS Human protein_coding chr4:187171550 chr4:187171550 nonsynonymous SNV 0.033 2 21 hPsi_associated_SNPs_104636 0 0 0 0 0 Endoplasmic reticulum 0 0.438719483398299 0.722959280014038 0 hPsi_site_3596 iPseU_CNN:0.722959280014038;iRNA_PseU:0 3597 chr19 2099330 2099330 1 + C T rs375600736 2099330 + 2099310 2099350 41 TGGAAGATGCTGCTGAGTGTCTCAAGCAGCACTGACAGCAG TGGAAGATGCTGCTGAGTGTTTCAAGCAGCACTGACAGCAG Direct Gain 0 0.957304422748436 0 0.435426265001297 prediction 0.914608845496871 Functional Gain - IZUMO4 ENSG00000099840 CDS Human protein_coding chr19:2099330 chr19:2099330 nonsynonymous SNV 0.119 0 21 hPsi_associated_SNPs_104637 0 0 1 0 1 Cytosol 0 0.438712960720545 0 0 hPsi_site_3597 iPseU_CNN:0;iRNA_PseU:0 3598 chr17 37864783 37864783 1 + C T SARC 37864783 + 37864763 37864803 41 GAGCTGCAGCTTCGAAGCCTCACAGGTGGCCTTCACCGTCA GAGCTGCAGCTTCGAAGCCTTACAGGTGGCCTTCACCGTCA Direct Gain 0 0.957303893525455 0 0.993829131126404 prediction 0.914607787050909 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37864783 chr17:37864783 synonymous SNV . 0 21 hPsi_associated_SNPs_104638 0 0 1 0 1 Cytosol 0 0.438719306675598 0.987658262252808 0 hPsi_site_3598 iPseU_CNN:0.987658262252808;iRNA_PseU:0 3599 chr9 129983901 129983901 1 + G A rs139495271 129983901 - 129983881 129983921 41 GGGAGGGGGCCAAAGTCTCTCACCAGGCACAGTTAGAACAA GGGAGGGGGCCAAAGTCTCTTACCAGGCACAGTTAGAACAA Direct Gain 0 0.95730142209222 0 0.986866116523743 prediction 0.91460284418444 Functional Gain - RALGPS1 ENSG00000228487 ncRNA_intronic Human antisense chr9:129983901 chr9:129983901 . . 0 21 hPsi_associated_SNPs_104639 0 0 0 0 0 Nucleus 0 0.438717906372261 0.973732233047486 0 hPsi_site_3599 iPseU_CNN:0.973732233047486;iRNA_PseU:0 3600 chr11 55606641 55606641 1 + C A COAD 55606641 - 55606621 55606661 41 ATGGCACAGAGTTTCTGGGAGATGGCAACTGTGTAGAGCAG ATGGCACAGAGTTTCTGGGATATGGCAACTGTGTAGAGCAG Direct Gain 0 0.957295021961111 0 0.963050603866577 prediction 0.914590043922223 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606641 chr11:55606641 synonymous SNV . 0 21 hPsi_associated_SNPs_104640 0 0 0 0 0 unknown 0 0.438718677940886 0.926101207733154 0 hPsi_site_3600 iPseU_CNN:0.926101207733154;iRNA_PseU:0 3601 chr19 47503672 47503672 1 + C A ESCA 47503672 - 47503652 47503692 41 GTGAGGGCGTCCATAGTGCTGAAATCAGGTCTCATCAAGGT GTGAGGGCGTCCATAGTGCTTAAATCAGGTCTCATCAAGGT Direct Gain 0 0.957285540202763 0 0.99839460849762 prediction 0.914571080405526 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47503672 chr19:47503672 nonsynonymous SNV 0.990 2 21 hPsi_associated_SNPs_104641 0 0 0 0 0 Ribosome 0 0.415712418073088 0.99678921699524 0 hPsi_site_3601 iPseU_CNN:0.99678921699524;iRNA_PseU:0 3602 chr3 57847690 57847690 1 + T A OV 57847690 - 57847670 57847710 41 TGGGTACATTCATCTTCAGTATTACTCAGACTTCGCTGCGA TGGGTACATTCATCTTCAGTTTTACTCAGACTTCGCTGCGA Direct Gain 0 0.957282039574433 0 0.999956488609314 prediction 0.914564079148865 Functional Gain - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57847690 chr3:57847690 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104642 0 0 0 0 0 Ribosome 0 0.438619320681061 0.999912977218628 0 hPsi_site_3602 iPseU_CNN:0.999912977218628;iRNA_PseU:0 3603 chr5 156727766 156727766 1 + G A COAD 156727766 - 156727746 156727786 41 CCTTCCTGCGCTCGGCATGGCACAGCCGCTTCACCTCGCTG CCTTCCTGCGCTCGGCATGGTACAGCCGCTTCACCTCGCTG Direct Gain 0 0.957281089676915 0 0.999998569488525 prediction 0.91456217935383 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156727766 chr5:156727766 nonsynonymous SNV 0.899 3 21 hPsi_associated_SNPs_104643 0 0 0 0 0 Cytosol 0 0.438718591951986 0.99999713897705 0 hPsi_site_3603 iPseU_CNN:0.99999713897705;iRNA_PseU:0 3604 chr11 89774530 89774530 1 + C T COAD 89774530 + 89774510 89774550 41 AGAATGACATTCAATGCAGTCTCTTTACCACCTCCCCACTT AGAATGACATTCAATGCAGTTTCTTTACCACCTCCCCACTT Direct Gain 0 0.957278321364074 0 0.991331338882446 prediction 0.914556642728148 Functional Gain - TRIM49C ENSG00000204449 CDS Human protein_coding chr11:89774530 chr11:89774530 nonsynonymous SNV 0.014 3 21 hPsi_associated_SNPs_104644 0 0 0 0 0 unknown 0 0.439359661478993 0.982662677764892 0 hPsi_site_3604 iPseU_CNN:0.982662677764892;iRNA_PseU:0 3605 chr1 22333420 22333420 1 + G A UCEC 22333420 - 22333400 22333440 41 GAGTGAGGCGAGCTGGACGGCATCTCCCAGCTGGGCGCTGC GAGTGAGGCGAGCTGGACGGTATCTCCCAGCTGGGCGCTGC Direct Gain 0 0.957271411434104 0 0.999214947223663 prediction 0.914542822868208 Functional Gain - CELA3A ENSG00000142789 CDS Human protein_coding chr1:22333420 chr1:22333420 nonsynonymous SNV 0.285 1 21 hPsi_associated_SNPs_104645 0 0 0 0 0 Endoplasmic reticulum 0 0.438653268430241 0.998429894447326 0 hPsi_site_3605 iPseU_CNN:0.998429894447326;iRNA_PseU:0 3606 chr22 40080923 40080923 1 + G A rs540580985 40080923 - 40080903 40080943 41 GCAGCCCGAGGCTTCTCATCCACCAGACCCGCCCTCCCACC GCAGCCCGAGGCTTCTCATCTACCAGACCCGCCCTCCCACC Direct Gain 0 0.957269773825527 0 0.993690371513367 prediction 0.914539547651054 Functional Gain - CACNA1I ENSG00000100346 UTR3 Human protein_coding chr22:40080923 chr22:40080923 . . 0 21 hPsi_associated_SNPs_104646 0 0 0 0 0 Endoplasmic reticulum 0 0.438718673201156 0.987380743026734 0 hPsi_site_3606 iPseU_CNN:0.987380743026734;iRNA_PseU:0 3607 chr6 30297491 30297491 1 + C T SKCM 30297491 + 30297471 30297511 41 GCTTGATATGTGCAATTTCCCACACCCACCGGGCCCACACC GCTTGATATGTGCAATTTCCTACACCCACCGGGCCCACACC Direct Gain 0 0.957268152926723 0 0.885609269142151 prediction 0.914536305853446 Functional Gain - TRIM39;TRIM39-RPP21 ENSG00000204599;ENSG00000248167 CDS Human other chr6:30297491 chr6:30297491 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_104647 0 0 0 0 1 unknown 0 0.438718592937728 0.771218538284302 0 hPsi_site_3607 iPseU_CNN:0.771218538284302;iRNA_PseU:0 3608 chr1 67833573 67833573 1 + C T COAD 67833573 + 67833553 67833593 41 ACAACATTCTGGTGACTTGGCAGCCTCCCAGGAAAGATCCC ACAACATTCTGGTGACTTGGTAGCCTCCCAGGAAAGATCCC Direct Gain 0 0.957265707619735 0 0.999462485313416 prediction 0.914531415239469 Functional Gain - IL12RB2 ENSG00000081985 CDS Human protein_coding chr1:67833573 chr1:67833573 stopgain 0.024 0 21 hPsi_associated_SNPs_104648 0 0 0 0 0 cytosol 0 0.438718592995102 0.998924970626832 0 hPsi_site_3608 iPseU_CNN:0.998924970626832;iRNA_PseU:0 3609 chrX 1720318 1720318 1 + G A rs142727356 1720318 - 1720298 1720338 41 GGGACCGGGTGTGGTCCGGGCTCGTGCTGCGCCGGCGGGGG GGGACCGGGTGTGGTCCGGGTTCGTGCTGCGCCGGCGGGGG Direct Gain 0 0.957263619518384 0 0.973424851894379 prediction 0.914527239036768 Functional Gain - AKAP17A ENSG00000197976 CDS Human protein_coding chrX:1720318 chrX:1720318 nonsynonymous SNV 0.010 2 21 hPsi_associated_SNPs_104649 0 0 0 0 0 nucleolus 0 0.438530878502051 0.946849703788758 0 hPsi_site_3609 iPseU_CNN:0.946849703788758;iRNA_PseU:0 3610 chr17 11607595 11607595 1 + G A SKCM 11607595 - 11607575 11607615 41 ATAGTCCTTCATGGCACTCTCATAGCCTTCCTCCAGCCTGG ATAGTCCTTCATGGCACTCTTATAGCCTTCCTCCAGCCTGG Direct Gain 0 0.95726352096764 0 0.965932250022888 prediction 0.914527041935281 Functional Gain - DNAH9 ENSG00000007174 CDS Human protein_coding chr17:11607595 chr17:11607595 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_104650 0 0 0 0 0 exosome 0 0.438718592859927 0.931864500045776 0 hPsi_site_3610 iPseU_CNN:0.931864500045776;iRNA_PseU:0 3611 chr11 129246050 129246050 1 + G T UCEC 129246050 + 129246030 129246070 41 GAGACCTGCGATTACTTTGAGAAACTTTCCCTCTACTCCGT GAGACCTGCGATTACTTTGATAAACTTTCCCTCTACTCCGT Direct Gain 0 0.957261768956835 0 0.235945373773575 prediction 0.914523537913669 Functional Gain - BARX2 ENSG00000043039 CDS Human protein_coding chr11:129246050 chr11:129246050 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104651 0 0 1 0 1 exosome 0 0.438718597952659 0 0 hPsi_site_3611 iPseU_CNN:0;iRNA_PseU:0 3612 chr7 8790737 8790737 1 + G A COAD 8790737 - 8790717 8790757 41 GAGTCGGCTGATAGACAAGTCTTTGCTGCTTTCTGTCCATA GAGTCGGCTGATAGACAAGTTTTTGCTGCTTTCTGTCCATA Direct Gain 0 0.957258541734458 0 0.998606741428375 prediction 0.914517083468915 Functional Gain - NXPH1 ENSG00000122584 CDS Human protein_coding chr7:8790737 chr7:8790737 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104652 0 0 0 0 0 nucleoplasm 0 0.436163813150995 0.99721348285675 0 hPsi_site_3612 iPseU_CNN:0.99721348285675;iRNA_PseU:0 3613 chr5 10433762 10433762 1 + C T HNSC 10433762 + 10433742 10433782 41 GAAATCTGGCAAACAAGGCTCATCTCCACCACCTCCACAGT GAAATCTGGCAAACAAGGCTTATCTCCACCACCTCCACAGT Direct Gain 0 0.95725200536147 0 0.270461678504944 prediction 0.91450401072294 Functional Gain - MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10433762 chr5:10433762 nonsynonymous SNV 0.278 0 21 hPsi_associated_SNPs_104653 0 0 1 0 1 Nucleus 0 0.438722916275427 0 0 hPsi_site_3613 iPseU_CNN:0;iRNA_PseU:0 3614 chr7 143771684 143771684 1 + C T SKCM 143771684 + 143771664 143771704 41 TCCTATGATCGGTACGTGGCCATCTGCCACCCTCTCCGATA TCCTATGATCGGTACGTGGCTATCTGCCACCCTCTCCGATA Direct Gain 0 0.957250862520756 0 0.999637126922607 prediction 0.914501725041513 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771684 chr7:143771684 synonymous SNV . 0 21 hPsi_associated_SNPs_104654 0 0 0 0 0 unknown 0 0.438718526162533 0.999274253845214 0 hPsi_site_3614 iPseU_CNN:0.999274253845214;iRNA_PseU:0 3615 chr14 22671053 22671053 1 + A T HNSC 22671053 + 22671033 22671073 41 AGCCTGTTCACTTGCCTTGTAACCACTCCACAATCAGTGGA AGCCTGTTCACTTGCCTTGTTACCACTCCACAATCAGTGGA Direct Gain 0 0.957246292698403 0 0.999977827072144 prediction 0.914492585396807 Functional Gain - OR4E1;LINC02332 ENSG00000211812 CDS Human TR_V_gene chr14:22671053 chr14:22671053 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_104655 0 0 0 0 1 unknown 0 0.438718523606457 0.999955654144288 0 hPsi_site_3615 iPseU_CNN:0.999955654144288;iRNA_PseU:0 3616 chr17 37657663 37657663 1 + T A OV 37657663 - 37657643 37657683 41 AGCAAAATGTTAGAACACTTAATATCCCGATGCAGGAAATT AGCAAAATGTTAGAACACTTTATATCCCGATGCAGGAAATT Direct Gain 0 0.957233532225275 0 0.0570176839828491 prediction 0.91446706445055 Functional Gain - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37657663 chr17:37657663 synonymous SNV . 0 21 hPsi_associated_SNPs_104656 0 0 0 0 0 Nucleus 0 0.438588848596355 0 0 hPsi_site_3616 iPseU_CNN:0;iRNA_PseU:0 3617 chr7 96639170 96639170 1 + T A STAD 96639170 - 96639150 96639190 41 AGGGGGTCGCTCTCATGAGGATTACTGCCCTGCTTCAGCAG AGGGGGTCGCTCTCATGAGGTTTACTGCCCTGCTTCAGCAG Direct Gain 0 0.957233502549162 0 0.946719169616699 prediction 0.914467005098325 Functional Gain - DLX6 ENSG00000006377 CDS Human protein_coding chr7:96639170 chr7:96639170 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_104657 0 0 0 0 0 cytosol 0 0.438718590858048 0.893438339233398 0 hPsi_site_3617 iPseU_CNN:0.893438339233398;iRNA_PseU:0 3618 chr14 67525414 67525414 1 + C A UCEC 67525414 - 67525394 67525434 41 TAGATGTCAGAGGAAAAGGAGACATGCGATGTCTTCTAGCC TAGATGTCAGAGGAAAAGGATACATGCGATGTCTTCTAGCC Direct Gain 0 0.957231114813686 0 0.999999523162842 prediction 0.914462229627372 Functional Gain - GPHN ENSG00000171723 CDS Human protein_coding chr14:67525414 chr14:67525414 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104658 0 0 0 0 0 chromatin 0 0.438720280977072 0.999999046325684 0 hPsi_site_3618 iPseU_CNN:0.999999046325684;iRNA_PseU:0 3619 chr7 89897659 89897659 1 + G T SKCM 89897659 + 89897639 89897679 41 AAATTTGTAAGTGTATTGTTGATTTTTATCATGCAGAACCA AAATTTGTAAGTGTATTGTTTATTTTTATCATGCAGAACCA Direct Gain 0 0.957230991506755 0 0.979077577590942 prediction 0.91446198301351 Functional Gain - CFAP69 ENSG00000105792 CDS Human protein_coding chr7:89897659 chr7:89897659 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104659 0 0 0 1 2 cytosol 0 0.434581923604655 0.958155155181884 0 hPsi_site_3619 iPseU_CNN:0.958155155181884;iRNA_PseU:0 3620 chr19 41518311 41518311 1 + G T UCEC 41518311 + 41518291 41518331 41 AGTCATCTATGAGATTCAGAGATTTTCCGACCTTCTCCCCA AGTCATCTATGAGATTCAGATATTTTCCGACCTTCTCCCCA Direct Gain 0 0.957223305125884 0 0.99577260017395 prediction 0.914446610251767 Functional Gain - CYP2B6 ENSG00000197408 CDS Human protein_coding chr19:41518311 chr19:41518311 nonsynonymous SNV 0.929 5 21 hPsi_associated_SNPs_104660 0 0 0 0 1 Nucleus 0 0.438295368129721 0.9915452003479 0 hPsi_site_3620 iPseU_CNN:0.9915452003479;iRNA_PseU:0 3621 chr16 89334972 89334972 1 + G A UCEC 89334972 - 89334952 89334992 41 AGGAACTGGACCCCGCCGGGCACAAGTCCCTGTGCGTGAAC AGGAACTGGACCCCGCCGGGTACAAGTCCCTGTGCGTGAAC Direct Gain 0 0.957221773410914 0 0.999294757843018 prediction 0.914443546821827 Functional Gain - ANKRD11 ENSG00000167522 CDS Human protein_coding chr16:89334972 chr16:89334972 nonsynonymous SNV 0.942 1 21 hPsi_associated_SNPs_104661 0 0 0 0 1 Cytosol 0 0.438375744168007 0.998589515686036 0 hPsi_site_3621 iPseU_CNN:0.998589515686036;iRNA_PseU:0 3622 chrX 72667266 72667266 1 + G A LUSC 72667266 - 72667246 72667286 41 CAGTGAGGATCCATGCTGGGCATATGAGGATACCCCATATA CAGTGAGGATCCATGCTGGGTATATGAGGATACCCCATATA Direct Gain 0 0.957219518154616 0 0.999866724014282 prediction 0.914439036309232 Functional Gain - CDX4 ENSG00000131264 CDS Human protein_coding chrX:72667266 chrX:72667266 nonsynonymous SNV 0.683 0 21 hPsi_associated_SNPs_104662 0 0 0 0 0 exosome 0 0.438713867726103 0.999733448028564 0 hPsi_site_3622 iPseU_CNN:0.999733448028564;iRNA_PseU:0 3623 chr6 29912502 29912502 1 + C T rs9260198 29912502 + 29912482 29912522 41 TGGGAAGCACCGTCCACAATCATGGGCCTACCCAGTCTGGG TGGGAAGCACCGTCCACAATTATGGGCCTACCCAGTCTGGG Direct Gain 0 0.957217882099288 0 0.975459337234497 prediction 0.914435764198577 Functional Gain - HLA-A ENSG00000206503 intronic Human protein_coding chr6:29912502 chr6:29912502 . . 0 21 hPsi_associated_SNPs_104663 0 0 0 0 0 Endoplasmic reticulum 0 0.438718683706747 0.950918674468994 0 hPsi_site_3623 iPseU_CNN:0.950918674468994;iRNA_PseU:0 3624 chr14 38678747 38678747 1 + G A rs199894154 38678747 - 38678727 38678767 41 GCGCTGCCCTGGCCCTCGCTCAAGGTCCCGTTCTGGGACGC GCGCTGCCCTGGCCCTCGCTTAAGGTCCCGTTCTGGGACGC Direct Gain 0 0.957217590518261 0 0.999868512153625 prediction 0.914435181036522 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38678747 chr14:38678747 synonymous SNV . 0 21 hPsi_associated_SNPs_104664 0 0 0 0 0 nucleus 0 0.438718599697212 0.99973702430725 0 hPsi_site_3624 iPseU_CNN:0.99973702430725;iRNA_PseU:0 3625 chr9 20949656 20949656 1 + C T rs187226133 20949656 + 20949636 20949676 41 CAAGGCAGACTTAATGAAGTCATTAGAACCTTAACTCAGGT CAAGGCAGACTTAATGAAGTTATTAGAACCTTAACTCAGGT Direct Gain 0 0.957213963077343 0 0.993017196655273 prediction 0.914427926154686 Functional Gain - FOCAD ENSG00000188352 CDS Human protein_coding chr9:20949656 chr9:20949656 synonymous SNV . 0 21 hPsi_associated_SNPs_104665 0 0 0 0 2 Ribosome 0 0.440672994713855 0.986034393310546 0 hPsi_site_3625 iPseU_CNN:0.986034393310546;iRNA_PseU:0 3626 chr14 91639689 91639689 1 + G A BLCA 91639689 - 91639669 91639709 41 TTGTCCTTGGGAATGGGCCTCATCGTGACCACCAGAGGGCA TTGTCCTTGGGAATGGGCCTTATCGTGACCACCAGAGGGCA Direct Gain 0 0.957212956551596 0 0.333895534276962 prediction 0.914425913103193 Functional Gain - C14orf159 ENSG00000133943 CDS Human protein_coding chr14:91639689 chr14:91639689 nonsynonymous SNV 0.368 1 21 hPsi_associated_SNPs_104666 0 0 0 0 0 chromatin 0 0.438718592862719 0 0 hPsi_site_3626 iPseU_CNN:0;iRNA_PseU:0 3627 chr11 51515731 51515731 1 + C T LUSC 51515731 + 51515711 51515751 41 GGAGTGGTGTGGATGGGAGGCTTTCTTCATGCAACCATACA GGAGTGGTGTGGATGGGAGGTTTTCTTCATGCAACCATACA Direct Gain 0 0.95721256662089 0 0.317370563745499 prediction 0.91442513324178 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515731 chr11:51515731 synonymous SNV . 0 21 hPsi_associated_SNPs_104667 0 0 0 0 0 unknown 0 0.438718587741674 0 0 hPsi_site_3627 iPseU_CNN:0;iRNA_PseU:0 3628 chr17 46052295 46052295 1 + C T rs182381677 46052295 + 46052275 46052315 41 AGGAATTGTGCTTGGTGTGTCATGTGGATTCTCTCTTGCAT AGGAATTGTGCTTGGTGTGTTATGTGGATTCTCTCTTGCAT Direct Gain 0 0.957208287635401 0 0.773397326469421 prediction 0.914416575270801 Functional Gain - CDK5RAP3 ENSG00000108465 intronic Human protein_coding chr17:46052295 chr17:46052295 . . 0 21 hPsi_associated_SNPs_104668 0 0 1 0 0 chromatin 0 0.381856831558197 0.546794652938842 0 hPsi_site_3628 iPseU_CNN:0.546794652938842;iRNA_PseU:0 3629 chr9 131671273 131671273 1 + C T UCEC 131671273 + 131671253 131671293 41 GAGCGCATCCCCCACTCCATCTTCAGCCTCCACAACCTGCA GAGCGCATCCCCCACTCCATTTTCAGCCTCCACAACCTGCA Direct Gain 0 0.95719574421582 0 0.030664324760437 prediction 0.914391488431639 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671273 chr9:131671273 synonymous SNV . 0 21 hPsi_associated_SNPs_104669 0 0 1 0 0 Endoplasmic reticulum 0 0.438718600874916 0 0 hPsi_site_3629 iPseU_CNN:0;iRNA_PseU:0 3630 chr2 220473122 220473122 1 + G A CESC 220473122 - 220473102 220473142 41 CTTCTGGTCCTGCTCCTCTTCTTCCTCCTCTCCTGCCTCCT CTTCTGGTCCTGCTCCTCTTTTTCCTCCTCTCCTGCCTCCT Direct Gain 0 0.957180492516351 0 0.494362831115723 prediction 0.914360985032702 Functional Gain - STK11IP ENSG00000144589 CDS Human protein_coding chr2:220473122 chr2:220473122 nonsynonymous SNV 0.404 0 21 hPsi_associated_SNPs_104670 0 0 0 0 0 chromatin 0 0.438718593943715 0 0 hPsi_site_3630 iPseU_CNN:0;iRNA_PseU:0 3631 chr21 14983062 14983062 1 + G A OV 14983062 - 14983042 14983082 41 AGGCCCGGTTACCTCTTTTCCTTGTCCCTCTTGTTCATGTC AGGCCCGGTTACCTCTTTTCTTTGTCCCTCTTGTTCATGTC Direct Gain 0 0.95717749691117 0 0.330566585063934 prediction 0.91435499382234 Functional Gain - POTED ENSG00000166351 CDS Human protein_coding chr21:14983062 chr21:14983062 synonymous SNV . 0 21 hPsi_associated_SNPs_104671 0 0 0 0 0 exosome 0 0.438718605276283 0 0 hPsi_site_3631 iPseU_CNN:0;iRNA_PseU:0 3632 chr1 116935553 116935553 1 + G A LUAD 116935553 - 116935533 116935573 41 ATTTTGGCGTATCTTTCTCTCATCTCCTTCACGGAACCACA ATTTTGGCGTATCTTTCTCTTATCTCCTTCACGGAACCACA Direct Gain 0 0.957176893948999 0 0.999877035617828 prediction 0.914353787897998 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116935553 chr1:116935553 nonsynonymous SNV 0.960 2 21 hPsi_associated_SNPs_104672 0 0 0 0 1 Nucleus 0 0.43870396440545 0.999754071235656 0 hPsi_site_3632 iPseU_CNN:0.999754071235656;iRNA_PseU:0 3633 chr22 31484046 31484046 1 + G A CESC 31484046 - 31484026 31484066 41 GCACGGAAACGCTTGGATGCCAGGGCCTCCTCCTCGCGCTC GCACGGAAACGCTTGGATGCTAGGGCCTCCTCCTCGCGCTC Direct Gain 0 0.957176294469468 0 0.999972581863403 prediction 0.914352588938935 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31484046 chr22:31484046 synonymous SNV . 0 21 hPsi_associated_SNPs_104673 0 0 0 0 0 Cytosol 0 0.438719788570027 0.999945163726806 0 hPsi_site_3633 iPseU_CNN:0.999945163726806;iRNA_PseU:0 3634 chr22 39497406 39497406 1 + C T rs77993299 39497406 + 39497386 39497426 41 CACGACCATCTGAACCTGGGCATCTTCGCCTCCCGCCTGTA CACGACCATCTGAACCTGGGTATCTTCGCCTCCCGCCTGTA Direct Gain 0 0.957171764672564 0 0.999237418174744 prediction 0.914343529345127 Functional Gain - APOBEC3H ENSG00000100298 CDS Human protein_coding chr22:39497406 chr22:39497406 synonymous SNV . 0 21 hPsi_associated_SNPs_104674 0 0 0 0 0 exosome 0 0.438718592995113 0.998474836349488 0 hPsi_site_3634 iPseU_CNN:0.998474836349488;iRNA_PseU:0 3635 chr5 179126070 179126070 1 + C T rs185536392 179126070 + 179126050 179126090 41 GGTGTGCGGGCGGGAAGGGGCACGGGCACCCCCGCGGTCCC GGTGTGCGGGCGGGAAGGGGTACGGGCACCCCCGCGGTCCC Direct Gain 0 0.957170902751952 0 0.999968886375427 prediction 0.914341805503905 Functional Gain - CANX ENSG00000127022 CDS Human protein_coding chr5:179126070 chr5:179126070 unknown . 0 21 hPsi_associated_SNPs_104675 0 0 1 0 1 Nucleus 0 0.438714039568763 0.999937772750854 0 hPsi_site_3635 iPseU_CNN:0.999937772750854;iRNA_PseU:0 3636 chr9 82336786 82336786 1 + C T LGG 82336786 + 82336766 82336806 41 AGGGGCGGCAGCTGCAGCAGCACGACTTCACCTCCCAGGTA AGGGGCGGCAGCTGCAGCAGTACGACTTCACCTCCCAGGTA Direct Gain 0 0.957162796228959 0 0.999079942703247 prediction 0.914325592457917 Functional Gain - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82336786 chr9:82336786 nonsynonymous SNV 0.989 1 21 hPsi_associated_SNPs_104676 0 0 0 0 1 Endoplasmic reticulum 0 0.438718593089548 0.998159885406494 0 hPsi_site_3636 iPseU_CNN:0.998159885406494;iRNA_PseU:0 3637 chr19 19790525 19790525 1 + C T DLBC 19790525 + 19790505 19790545 41 ATCCCAGTTTATTTCAAATTCATGTTAGAACTCACACTGGA ATCCCAGTTTATTTCAAATTTATGTTAGAACTCACACTGGA Direct Gain 0 0.957158055466334 0 0.0989330410957336 prediction 0.914316110932669 Functional Gain - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790525 chr19:19790525 nonsynonymous SNV 0.373 4 21 hPsi_associated_SNPs_104677 0 0 1 0 0 nucleolus 0 0.438691046248988 0 0 hPsi_site_3637 iPseU_CNN:0;iRNA_PseU:0 3638 chrX 106171656 106171656 1 + C A UCEC 106171656 - 106171636 106171676 41 AGGCCCAGAAGGGTGCTATAGATGTCACACTGGGTGATGCC AGGCCCAGAAGGGTGCTATATATGTCACACTGGGTGATGCC Direct Gain 0 0.957156032813371 0 0.886130511760712 prediction 0.914312065626742 Functional Gain - CLDN2 ENSG00000165376 CDS Human protein_coding chrX:106171656 chrX:106171656 synonymous SNV . 0 21 hPsi_associated_SNPs_104678 0 0 0 0 0 Ribosome 0 0.438733672597577 0.772261023521424 0 hPsi_site_3638 iPseU_CNN:0.772261023521424;iRNA_PseU:0 3639 chr6 30918182 30918182 1 + G A rs558596212 30918182 - 30918162 30918202 41 GTGGTCTTCTCGTTGGCTGTCATTTCTCTATTTTCTGTAGG GTGGTCTTCTCGTTGGCTGTTATTTCTCTATTTTCTGTAGG Direct Gain 0 0.957154487342419 0 0.485099911689758 prediction 0.914308974684838 Functional Gain - DPCR1 ENSG00000168631 CDS Human protein_coding chr6:30918182 chr6:30918182 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104679 0 0 0 0 0 exosome 0 0.438718590568733 0 0 hPsi_site_3639 iPseU_CNN:0;iRNA_PseU:0 3640 chr15 90167874 90167874 1 + C T SKCM 90167874 + 90167854 90167894 41 GGGGCTACCCAGGCCCTGGTCTCAGGAGTGATTGGCATGCA GGGGCTACCCAGGCCCTGGTTTCAGGAGTGATTGGCATGCA Direct Gain 0 0.957151930032273 0 0.0979771316051483 prediction 0.914303860064547 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90167874 chr15:90167874 nonsynonymous SNV 0.164 0 21 hPsi_associated_SNPs_104680 0 0 1 0 0 chromatin 0 0.43871861028449 0 0 hPsi_site_3640 iPseU_CNN:0;iRNA_PseU:0 3641 chr22 24813444 24813444 1 + G A rs139066290 24813444 - 24813424 24813464 41 GGTTACAGGGCTCACTGTCCCACAGCCCCAGGCCACACGGT GGTTACAGGGCTCACTGTCCTACAGCCCCAGGCCACACGGT Direct Gain 0 0.95714849871229 0 0.999994516372681 prediction 0.914296997424581 Functional Gain - SPECC1L-ADORA2A ENSG00000100014 UTR3 Human protein_coding chr22:24813444 chr22:24813444 . . 0 21 hPsi_associated_SNPs_104681 0 0 0 0 0 exosome 0 0.438718577935328 0.999989032745362 0 hPsi_site_3641 iPseU_CNN:0.999989032745362;iRNA_PseU:0 3642 chr1 11249964 11249964 1 + G T ACC 11249964 + 11249944 11249984 41 CCGAGATGAACAACCAAATTGACATCATGCAGCTGCAGGCA CCGAGATGAACAACCAAATTTACATCATGCAGCTGCAGGCA Direct Gain 0 0.957145139756143 0 0.991917729377747 prediction 0.914290279512286 Functional Gain - ANGPTL7 ENSG00000171819 CDS Human protein_coding chr1:11249964 chr1:11249964 nonsynonymous SNV 0.988 2 21 hPsi_associated_SNPs_104682 0 0 0 0 1 nucleoplasm 0 0.435861934126333 0.983835458755494 0 hPsi_site_3642 iPseU_CNN:0.983835458755494;iRNA_PseU:0 3643 chr12 266236 266236 1 + G A LIHC 266236 - 266216 266256 41 GCCTGGAACTTGCGCAGGGCCTCGTCCAGCTCCATGCTGGA GCCTGGAACTTGCGCAGGGCTTCGTCCAGCTCCATGCTGGA Direct Gain 0 0.957144951294563 0 0.999921321868896 prediction 0.914289902589126 Functional Gain - IQSEC3 ENSG00000120645 CDS Human protein_coding chr12:266236 chr12:266236 synonymous SNV . 0 21 hPsi_associated_SNPs_104683 0 0 0 0 0 nucleolus 0 0.438718132316157 0.999842643737792 0 hPsi_site_3643 iPseU_CNN:0.999842643737792;iRNA_PseU:0 3644 chr15 52005589 52005589 1 + G A STAD 52005589 - 52005569 52005609 41 TTCTTTATTTCCCTTTTTGTCATGTTTCTTCAACCATTCAA TTCTTTATTTCCCTTTTTGTTATGTTTCTTCAACCATTCAA Direct Gain 0 0.957130818922173 0 0.333341181278229 prediction 0.914261637844346 Functional Gain - SCG3 ENSG00000104112 CDS Human protein_coding chr15:52005589 chr15:52005589 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_104684 0 0 0 0 0 nucleolus 0 0.438718593031884 0 0 hPsi_site_3644 iPseU_CNN:0;iRNA_PseU:0 3645 chr17 47241572 47241572 1 + G A UCEC 47241572 - 47241552 47241592 41 TTCCAGGGGCTTCTGGCTGTCATCAGCCACTATTACGGTCA TTCCAGGGGCTTCTGGCTGTTATCAGCCACTATTACGGTCA Direct Gain 0 0.957130270011397 0 0.999937534332275 prediction 0.914260540022793 Functional Gain - B4GALNT2 ENSG00000167080 CDS Human protein_coding chr17:47241572 chr17:47241572 nonsynonymous SNV 0.103 4 21 hPsi_associated_SNPs_104685 0 0 0 0 0 nucleolus 0 0.438718589038108 0.99987506866455 0 hPsi_site_3645 iPseU_CNN:0.99987506866455;iRNA_PseU:0 3646 chr11 65402086 65402086 1 + G T SARC 65402086 + 65402066 65402106 41 CTGGGCCGCCGGGCCCTGGGGACAGCCTCTCACAGCATGTC CTGGGCCGCCGGGCCCTGGGTACAGCCTCTCACAGCATGTC Direct Gain 0 0.957125347341168 0 0.994788765907288 prediction 0.914250694682335 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402086 chr11:65402086 synonymous SNV . 0 21 hPsi_associated_SNPs_104686 0 0 1 0 2 Ribosome 0 0.439018993468819 0.989577531814576 0 hPsi_site_3646 iPseU_CNN:0.989577531814576;iRNA_PseU:0 3647 chr1 173826739 173826739 1 + G A LGG 173826739 - 173826719 173826759 41 TGGGGTATTGCTCATGAGGTCATGTCCCCGGAAGGACTTTG TGGGGTATTGCTCATGAGGTTATGTCCCCGGAAGGACTTTG Direct Gain 0 0.957124918464517 0 0.403220057487488 prediction 0.914249836929034 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173826739 chr1:173826739 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104687 0 0 0 0 0 chromatin 0 0.438755342826337 0 0 hPsi_site_3647 iPseU_CNN:0;iRNA_PseU:0 3648 chrX 150572114 150572114 1 + C T LUAD 150572114 + 150572094 150572134 41 TTATTCCAGAAATGAAAGCTCATTAGCATCTACACTGAAGA TTATTCCAGAAATGAAAGCTTATTAGCATCTACACTGAAGA Direct Gain 0 0.957113167947629 0 0.00622075796127319 prediction 0.914226335895257 Functional Gain - VMA21 ENSG00000160131 CDS Human protein_coding chrX:150572114 chrX:150572114 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_104688 0 0 1 0 2 Ribosome 0 0.438600626658314 0 0 hPsi_site_3648 iPseU_CNN:0;iRNA_PseU:0 3649 chr10 135033549 135033549 1 + C T LIHC 135033549 + 135033529 135033569 41 CGGCCCACCTCCTGGCCATGCACATCCAGCAGCTGGAGACA CGGCCCACCTCCTGGCCATGTACATCCAGCAGCTGGAGACA Direct Gain 0 0.95711306996241 0 0.999997735023499 prediction 0.914226139924819 Functional Gain - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135033549 chr10:135033549 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_104689 0 0 0 0 2 Endoplasmic reticulum 0 0.439233827638249 0.999995470046998 0 hPsi_site_3649 iPseU_CNN:0.999995470046998;iRNA_PseU:0 3650 chr13 24895627 24895627 1 + C T SKCM 24895627 + 24895607 24895647 41 GATACAGCAGCGGGGAAATTCACGTGCCACATTGCTGGGGT GATACAGCAGCGGGGAAATTTACGTGCCACATTGCTGGGGT Direct Gain 0 0.957110010263862 0 0.999844908714294 prediction 0.914220020527724 Functional Gain - C1QTNF9 ENSG00000240654 CDS Human protein_coding chr13:24895627 chr13:24895627 synonymous SNV . 0 21 hPsi_associated_SNPs_104690 0 0 0 0 0 exosome 0 0.43871816291604 0.999689817428588 0 hPsi_site_3650 iPseU_CNN:0.999689817428588;iRNA_PseU:0 3651 chr22 37423143 37423143 1 + G A rs545506221 37423143 - 37423123 37423163 41 ACATTAGCCGGGCGTGGTGGCACATGCCTGTAATCCCAGCT ACATTAGCCGGGCGTGGTGGTACATGCCTGTAATCCCAGCT Direct Gain 0 0.957109764186393 0 0.999995470046997 prediction 0.914219528372787 Functional Gain - MPST ENSG00000128309 intronic Human protein_coding chr22:37423143 chr22:37423143 . . 0 21 hPsi_associated_SNPs_104691 0 0 0 0 0 chromatin 0 0.438717463671401 0.999990940093994 0 hPsi_site_3651 iPseU_CNN:0.999990940093994;iRNA_PseU:0 3652 chr2 149806860 149806860 1 + G A UCEC 149806860 - 149806840 149806880 41 GAGTCCTGAAGAATCCGAGTCATCTTGCTGTCCCGGTATGG GAGTCCTGAAGAATCCGAGTTATCTTGCTGTCCCGGTATGG Direct Gain 0 0.957106018125469 0 0.991693258285522 prediction 0.914212036250938 Functional Gain - KIF5C ENSG00000168280 CDS Human protein_coding chr2:149806860 chr2:149806860 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104692 0 0 0 0 0 exosome 0 0.438703978539201 0.983386516571044 0 hPsi_site_3652 iPseU_CNN:0.983386516571044;iRNA_PseU:0 3653 chr15 43820186 43820186 1 + C T BLCA 43820186 + 43820166 43820206 41 TTCAGCCTTTGGCTTCTCCTCATTGCAGCCAGCTCCCCCAC TTCAGCCTTTGGCTTCTCCTTATTGCAGCCAGCTCCCCCAC Direct Gain 0 0.957094821134592 0 0.995571732521057 prediction 0.914189642269184 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43820186 chr15:43820186 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_104693 0 0 1 0 0 nucleolus 0 0.467139150417099 0.991143465042114 0 hPsi_site_3653 iPseU_CNN:0.991143465042114;iRNA_PseU:0 3654 chr10 114169419 114169419 1 + G A UCEC 114169419 - 114169399 114169439 41 GCATCATATAGGGATAAGATCTCAATTCCACTCTTCTCCCC GCATCATATAGGGATAAGATTTCAATTCCACTCTTCTCCCC Direct Gain 0 0.957092825539534 0 0.167985856533051 prediction 0.914185651079069 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114169419 chr10:114169419 synonymous SNV . 0 21 hPsi_associated_SNPs_104694 0 0 0 0 0 Ribosome 0 0.438718592995102 0 0 hPsi_site_3654 iPseU_CNN:0;iRNA_PseU:0 3655 chr1 207500131 207500131 1 + C T COAD 207500131 + 207500111 207500151 41 GCTCGACTTCTAGTTTTTGTCTTATTTCAGGCAGCTCTGTC GCTCGACTTCTAGTTTTTGTTTTATTTCAGGCAGCTCTGTC Direct Gain 0 0.957092804790644 0 0.822080373764038 prediction 0.914185609581289 Functional Gain - CD55 ENSG00000196352 CDS Human protein_coding chr1:207500131 chr1:207500131 nonsynonymous SNV 0.000 2 21 hPsi_associated_SNPs_104695 0 0 1 1 2 Endoplasmic reticulum 0 0.438715425159987 0.644160747528076 0 hPsi_site_3655 iPseU_CNN:0.644160747528076;iRNA_PseU:0 3656 chr15 86198672 86198672 1 + G T UCEC 86198672 + 86198652 86198692 41 AGGAAGAGCATTTGGCCTGTGATATCACCGGATCCAGTTCA AGGAAGAGCATTTGGCCTGTTATATCACCGGATCCAGTTCA Direct Gain 0 0.957090594792725 0 0.569099009037018 prediction 0.91418118958545 Functional Gain - AKAP13 ENSG00000170776 CDS Human protein_coding chr15:86198672 chr15:86198672 nonsynonymous SNV 0.951 3 21 hPsi_associated_SNPs_104696 0 0 0 0 0 Ribosome 0 0.438717524790785 0.138198018074036 0 hPsi_site_3656 iPseU_CNN:0.138198018074036;iRNA_PseU:0 3657 chr1 150445062 150445062 1 + C A UCEC 150445062 - 150445042 150445082 41 GAGGGACAGGTGGGGCAGATGATGGCCCCACTGGCTCTCTC GAGGGACAGGTGGGGCAGATTATGGCCCCACTGGCTCTCTC Direct Gain 0 0.957090466158675 0 0.893414735794067 prediction 0.914180932317349 Functional Gain - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445062 chr1:150445062 stopgain 0.999 0 21 hPsi_associated_SNPs_104697 0 0 0 0 0 Cytosol 0 0.438719333055325 0.786829471588134 0 hPsi_site_3657 iPseU_CNN:0.786829471588134;iRNA_PseU:0 3658 chr3 19575248 19575248 1 + C T LUAD 19575248 + 19575228 19575268 41 TTCTCCAAGCCTTGATTATTCACCTTCCCACTACCAGGTTG TTCTCCAAGCCTTGATTATTTACCTTCCCACTACCAGGTTG Direct Gain 0 0.957084930501326 0 0.999786794185638 prediction 0.914169861002652 Functional Gain - KCNH8 ENSG00000183960 CDS Human protein_coding chr3:19575248 chr3:19575248 nonsynonymous SNV 0.931 2 21 hPsi_associated_SNPs_104698 0 0 0 0 0 exosome 0 0.438686120459238 0.999573588371276 0 hPsi_site_3658 iPseU_CNN:0.999573588371276;iRNA_PseU:0 3659 chrX 70598787 70598787 1 + C A UCEC 70598787 - 70598767 70598807 41 GGTTTTGTCCCTTTGTGTTTGACATCCTCCCCATCCCAGAT GGTTTTGTCCCTTTGTGTTTTACATCCTCCCCATCCCAGAT Direct Gain 0 0.957084659891081 0 0.947568774223328 prediction 0.914169319782162 Functional Gain - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70598787 chrX:70598787 synonymous SNV . 0 21 hPsi_associated_SNPs_104699 0 0 0 0 0 Cytosol 0 0.438726308979962 0.895137548446656 0 hPsi_site_3659 iPseU_CNN:0.895137548446656;iRNA_PseU:0 3660 chr6 26091715 26091715 1 + C T UCEC 26091715 + 26091695 26091735 41 CCAAGCTGGAGTGGGAAAGGCACAAGATTCGGGCCAGGCAG CCAAGCTGGAGTGGGAAAGGTACAAGATTCGGGCCAGGCAG Direct Gain 0 0.957082893225701 0 0.996764779090881 prediction 0.914165786451401 Functional Gain - HFE ENSG00000010704 CDS Human protein_coding chr6:26091715 chr6:26091715 nonsynonymous SNV 0.681 1 21 hPsi_associated_SNPs_104700 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859299032 0.993529558181762 0 hPsi_site_3660 iPseU_CNN:0.993529558181762;iRNA_PseU:0 3661 chr19 47104662 47104662 1 + C A rs564316220 47104662 - 47104642 47104682 41 CGGGGTGTCCGGAGCACGGGGATCAAGGTTCCTCCGGCGGC CGGGGTGTCCGGAGCACGGGTATCAAGGTTCCTCCGGCGGC Direct Gain 0 0.957078998940094 0 0.999872624874115 prediction 0.914157997880187 Functional Gain - CALM3 ENSG00000160014 UTR5 Human protein_coding chr19:47104662 chr19:47104662 . . 0 21 hPsi_associated_SNPs_104701 0 0 0 0 0 Ribosome 0 0.438718631974815 0.99974524974823 0 hPsi_site_3661 iPseU_CNN:0.99974524974823;iRNA_PseU:0 3662 chr7 129962364 129962364 1 + G A SKCM 129962364 - 129962344 129962384 41 TGCAAATTTGATGCCGTTGTCATATGCCCAGTCGATGCTGC TGCAAATTTGATGCCGTTGTTATATGCCCAGTCGATGCTGC Direct Gain 0 0.957071820462804 0 0.998893022537231 prediction 0.914143640925609 Functional Gain - CPA4 ENSG00000128510 CDS Human protein_coding chr7:129962364 chr7:129962364 nonsynonymous SNV 0.468 0 21 hPsi_associated_SNPs_104702 0 0 0 0 0 Endoplasmic reticulum 0 0.438881266904051 0.997786045074462 0 hPsi_site_3662 iPseU_CNN:0.997786045074462;iRNA_PseU:0 3663 chr15 74425761 74425761 1 + G A SARC 74425761 - 74425741 74425781 41 GGCAGGGCGGGCAGGCGGTACACCGGCACCCCCTGCAGCGC GGCAGGGCGGGCAGGCGGTATACCGGCACCCCCTGCAGCGC Direct Gain 0 0.95707002785576 0 0.998954296112061 prediction 0.914140055711519 Functional Gain - ISLR2 ENSG00000167178 CDS Human protein_coding chr15:74425761 chr15:74425761 synonymous SNV . 0 21 hPsi_associated_SNPs_104703 0 0 0 0 0 Nucleus 0 0.438721817047506 0.997908592224122 0 hPsi_site_3663 iPseU_CNN:0.997908592224122;iRNA_PseU:0 3664 chr2 102781629 102781629 1 + G A rs3917286 102781629 - 102781609 102781649 41 GCATTATAACATAAGTTAGGCTCATTCTCCACAAATTTTGC GCATTATAACATAAGTTAGGTTCATTCTCCACAAATTTTGC Direct Gain 0 0.9570641839109 0 0.999813556671143 prediction 0.9141283678218 Functional Gain - IL1R1 ENSG00000115594 CDS Human protein_coding chr2:102781629 chr2:102781629 synonymous SNV . 0 21 hPsi_associated_SNPs_104704 0 0 0 0 0 Endoplasmic reticulum 0 0.438718711482077 0.999627113342286 0 hPsi_site_3664 iPseU_CNN:0.999627113342286;iRNA_PseU:0 3665 chr2 155307848 155307848 1 + T A rs707083 155307848 - 155307828 155307868 41 ATTTTGGTTAAGAATTGAGTATCCAACATAAACTCTAGGAG ATTTTGGTTAAGAATTGAGTTTCCAACATAAACTCTAGGAG Direct Gain 0 0.957063768053249 0 0.987673759460449 prediction 0.914127536106497 Functional Gain - GALNT13 ENSG00000224675 ncRNA_intronic Human antisense chr2:155307848 chr2:155307848 . . 0 21 hPsi_associated_SNPs_104705 0 0 0 0 0 Nucleus 0 0.43871919684312 0.975347518920898 0 hPsi_site_3665 iPseU_CNN:0.975347518920898;iRNA_PseU:0 3666 chr11 8008928 8008928 1 + C T UCEC 8008928 + 8008908 8008948 41 ACCGGCGGTACCAGTAAGTGCTCCTCCGGCCACGCCAACCC ACCGGCGGTACCAGTAAGTGTTCCTCCGGCCACGCCAACCC Direct Gain 0 0.957062203191014 0 0.998542964458466 prediction 0.914124406382027 Functional Gain - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8008928 chr11:8008928 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_104706 0 0 1 0 0 Nucleus 0 0.438718592778994 0.997085928916932 0 hPsi_site_3666 iPseU_CNN:0.997085928916932;iRNA_PseU:0 3667 chr19 50473730 50473730 1 + G A rs544619308 50473730 - 50473710 50473750 41 AGAAGTGGGAGGTGCTTGGTCTGGTTCTTCTAGGGGAGAGG AGAAGTGGGAGGTGCTTGGTTTGGTTCTTCTAGGGGAGAGG Direct Gain 0 0.957057660192721 0 0.999999523162842 prediction 0.914115320385442 Functional Gain - SIGLEC16 ENSG00000161643 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:50473730 chr19:50473730 . . 0 21 hPsi_associated_SNPs_104707 0 0 0 0 0 unknown 0 0.438718587682552 0.999999046325684 0 hPsi_site_3667 iPseU_CNN:0.999999046325684;iRNA_PseU:0 3668 chr5 140572684 140572684 1 + G A SKCM 140572684 - 140572664 140572704 41 CTCTGGATATATCATGCCTTCATCACCGCCACTAATGTTAA CTCTGGATATATCATGCCTTTATCACCGCCACTAATGTTAA Direct Gain 0 0.957054323931551 0 0.931564450263977 prediction 0.914108647863102 Functional Gain - PCDHB10 ENSG00000120324 CDS Human protein_coding chr5:140572684 chr5:140572684 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_104708 0 0 0 0 0 exosome 0 0.438807959001184 0.863128900527954 0 hPsi_site_3668 iPseU_CNN:0.863128900527954;iRNA_PseU:0 3669 chr17 13928664 13928664 1 + G A UCEC 13928664 - 13928644 13928684 41 CCCAGCCTTCTTTTAATGCTCTCCGGCACCTCCTGCACACA CCCAGCCTTCTTTTAATGCTTTCCGGCACCTCCTGCACACA Direct Gain 0 0.957052633305352 0 0.300841301679611 prediction 0.914105266610703 Functional Gain - CDRT15P1 ENSG00000141028 ncRNA_exonic Human unprocessed_pseudogene chr17:13928664 chr17:13928664 . . 0 21 hPsi_associated_SNPs_104709 0 0 0 0 0 unknown 0 0.438771466526268 0 0 hPsi_site_3669 iPseU_CNN:0;iRNA_PseU:0 3670 chr1 12460348 12460348 1 + G T BLCA 12460348 + 12460328 12460368 41 GCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGC GCTGTGCAAGTCAACGCAGTTAAGTTCCCCAGTAAGAGTGC Direct Gain 0 0.957042461289007 0 0.999880075454712 prediction 0.914084922578014 Functional Gain - VPS13D ENSG00000048707 CDS Human protein_coding chr1:12460348 chr1:12460348 synonymous SNV . 0 21 hPsi_associated_SNPs_104710 0 0 0 0 1 Nucleus 0 0.438529669535841 0.999760150909424 0 hPsi_site_3670 iPseU_CNN:0.999760150909424;iRNA_PseU:0 3671 chr2 113676227 113676227 1 + G A UCEC 113676227 - 113676207 113676247 41 GGGTGAGCCGCCGACTCCAGCATGTTCCAGGAGCCCACCTG GGGTGAGCCGCCGACTCCAGTATGTTCCAGGAGCCCACCTG Direct Gain 0 0.957037678405361 0 0.99956750869751 prediction 0.914075356810722 Functional Gain - IL37 ENSG00000125571 CDS Human protein_coding chr2:113676227 chr2:113676227 nonsynonymous SNV 0.009 1 21 hPsi_associated_SNPs_104711 0 0 0 0 0 exosome 0 0.438714794222358 0.99913501739502 0 hPsi_site_3671 iPseU_CNN:0.99913501739502;iRNA_PseU:0 3672 chr1 109707175 109707175 1 + C T COAD 109707175 + 109707155 109707195 41 GAAGGACCAGTCATGTAAGCCATGCGCTGAGGGCCGCTACT GAAGGACCAGTCATGTAAGCTATGCGCTGAGGGCCGCTACT Direct Gain 0 0.957033127741693 0 0.999948740005493 prediction 0.914066255483387 Functional Gain - KIAA1324 ENSG00000116299 CDS Human protein_coding chr1:109707175 chr1:109707175 nonsynonymous SNV 0.637 3 21 hPsi_associated_SNPs_104712 0 0 0 0 1 exosome 0 0.43872027809986 0.999897480010986 0 hPsi_site_3672 iPseU_CNN:0.999897480010986;iRNA_PseU:0 3673 chr11 57373936 57373936 1 + C T BLCA 57373936 + 57373916 57373956 41 AGAATGGAACCCTTTCACTTCAAAAACTCAGTTATAAAAGT AGAATGGAACCCTTTCACTTTAAAAACTCAGTTATAAAAGT Direct Gain 0 0.95702741819555 0 0.00268656015396118 prediction 0.914054836391101 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57373936 chr11:57373936 synonymous SNV . 0 21 hPsi_associated_SNPs_104713 0 0 0 0 2 Endoplasmic reticulum 0 0.438688438271664 0 0 hPsi_site_3673 iPseU_CNN:0;iRNA_PseU:0 3674 chr6 27107333 27107333 1 + C T UCEC 27107333 + 27107313 27107353 41 CACGCCAAGCGCAAGACGGTCACCGCCATGGACGTGGTCTA CACGCCAAGCGCAAGACGGTTACCGCCATGGACGTGGTCTA Direct Gain 0 0.957023662775039 0 0.999655306339264 prediction 0.914047325550078 Functional Gain - HIST1H4I ENSG00000198339 CDS Human other chr6:27107333 chr6:27107333 synonymous SNV . 0 21 hPsi_associated_SNPs_104714 0 0 1 0 0 Nucleus 0 0.4387196289984 0.999310612678528 0 hPsi_site_3674 iPseU_CNN:0.999310612678528;iRNA_PseU:0 3675 chr17 46135809 46135809 1 + C T KIRC 46135809 + 46135789 46135829 41 GGGGGCTGCAGCCAGGACTTCTTACTCTTCAGCCCCGAGGT GGGGGCTGCAGCCAGGACTTTTTACTCTTCAGCCCCGAGGT Direct Gain 0 0.957015832886605 0 0.998131036758423 prediction 0.914031665773209 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135809 chr17:46135809 synonymous SNV . 0 21 hPsi_associated_SNPs_104715 0 0 1 0 0 Ribosome 0 0.438796468668354 0.996262073516846 0 hPsi_site_3675 iPseU_CNN:0.996262073516846;iRNA_PseU:0 3676 chr4 166231823 166231823 1 + G A CESC 166231823 - 166231803 166231843 41 AAAGTGCTTCTCCGGTCTCTCATGTTAGCAACGCTGGTCCA AAAGTGCTTCTCCGGTCTCTTATGTTAGCAACGCTGGTCCA Direct Gain 0 0.957010422706732 0 0.296155482530594 prediction 0.914020845413463 Functional Gain - KLHL2 ENSG00000109466 CDS Human protein_coding chr4:166231823 chr4:166231823 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104716 0 0 0 0 0 chromatin 0 0.438698325165784 0 0 hPsi_site_3676 iPseU_CNN:0;iRNA_PseU:0 3677 chr13 51938396 51938396 1 + G T SARC 51938396 + 51938376 51938416 41 GTTTGTCTTCAGTATTGGGAGAGTTTCAAATCCCCTAGACT GTTTGTCTTCAGTATTGGGATAGTTTCAAATCCCCTAGACT Direct Gain 0 0.957009581402765 0 0.999914526939392 prediction 0.91401916280553 Functional Gain - INTS6 ENSG00000253309 CDS Human protein_coding chr13:51938396 chr13:51938396 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_104717 0 0 0 0 0 Cytosol 0 0.438718592982993 0.999829053878784 0 hPsi_site_3677 iPseU_CNN:0.999829053878784;iRNA_PseU:0 3678 chr20 60512859 60512859 1 + G A rs531630821 60512859 - 60512839 60512879 41 CAGATGCTGGCTGGTTTGGACAACTCACTCTTCTGGACCAA CAGATGCTGGCTGGTTTGGATAACTCACTCTTCTGGACCAA Direct Gain 0 0.957006597069719 0 0.996411681175232 prediction 0.914013194139438 Functional Gain - CDH4 ENSG00000179242 UTR3 Human protein_coding chr20:60512859 chr20:60512859 . . 0 21 hPsi_associated_SNPs_104718 0 0 0 0 0 exosome 0 0.438718587075562 0.992823362350464 0 hPsi_site_3678 iPseU_CNN:0.992823362350464;iRNA_PseU:0 3679 chr2 137814529 137814529 1 + G A SKCM 137814529 - 137814509 137814549 41 AGGACAGGAAATGGGAGCATCACAGGCTCTTGACTCAGTCA AGGACAGGAAATGGGAGCATTACAGGCTCTTGACTCAGTCA Direct Gain 0 0.957004071489592 0 0.963255167007446 prediction 0.914008142979184 Functional Gain - THSD7B ENSG00000144229 CDS Human protein_coding chr2:137814529 chr2:137814529 nonsynonymous SNV 0.749 0 21 hPsi_associated_SNPs_104719 0 0 0 0 0 nucleoplasm 0 0.438434525717871 0.926510334014892 0 hPsi_site_3679 iPseU_CNN:0.926510334014892;iRNA_PseU:0 3680 chr3 182577088 182577088 1 + G A BLCA 182577088 - 182577068 182577108 41 AGCTTTCTGATCTGATTCTTCATGATACAGATCAAGATCCC AGCTTTCTGATCTGATTCTTTATGATACAGATCAAGATCCC Direct Gain 0 0.956997631420527 0 0.999701976776123 prediction 0.913995262841054 Functional Gain - ATP11B ENSG00000058063 CDS Human protein_coding chr3:182577088 chr3:182577088 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104720 0 0 0 0 0 Endoplasmic reticulum 0 0.438628794491675 0.999403953552246 0 hPsi_site_3680 iPseU_CNN:0.999403953552246;iRNA_PseU:0 3681 chr19 20027415 20027415 1 + A T UCEC 20027415 + 20027395 20027435 41 ATCGCCCATCTGGAGCAAGGAAAAAAACCTTTGACTATGAA ATCGCCCATCTGGAGCAAGGTAAAAAACCTTTGACTATGAA Direct Gain 0 0.956996992436602 0 0.999972701072693 prediction 0.913993984873203 Functional Gain - ZNF93 ENSG00000184635 CDS Human protein_coding chr19:20027415 chr19:20027415 synonymous SNV . 0 21 hPsi_associated_SNPs_104721 0 0 0 0 2 Cytosol 0 0.43871859316115 0.999945402145386 0 hPsi_site_3681 iPseU_CNN:0.999945402145386;iRNA_PseU:0 3682 chr22 25016930 25016930 1 + C A HNSC 25016930 - 25016910 25016950 41 TGTCAGCCAGCTGCGGCAGGGTCAGTCTCTCCCCCTCCCGA TGTCAGCCAGCTGCGGCAGGTTCAGTCTCTCCCCCTCCCGA Direct Gain 0 0.956991119069498 0 0.998002648353577 prediction 0.913982238138996 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25016930 chr22:25016930 nonsynonymous SNV 0.106 0 21 hPsi_associated_SNPs_104722 0 0 0 0 0 exosome 0 0.438718592710729 0.996005296707154 0 hPsi_site_3682 iPseU_CNN:0.996005296707154;iRNA_PseU:0 3683 chr6 146480657 146480657 1 + G A LUAD 146480657 - 146480637 146480677 41 TCCTCGCACTGTCATGCCTTCACAGAAGCAGACCACCACTC TCCTCGCACTGTCATGCCTTTACAGAAGCAGACCACCACTC Direct Gain 0 0.956984912674566 0 0.992891430854797 prediction 0.913969825349132 Functional Gain - GRM1 ENSG00000152822 CDS Human protein_coding chr6:146480657 chr6:146480657 nonsynonymous SNV 0.982 4 21 hPsi_associated_SNPs_104723 0 0 0 0 0 exosome 0 0.438115361667811 0.985782861709594 0 hPsi_site_3683 iPseU_CNN:0.985782861709594;iRNA_PseU:0 3684 chr10 72292502 72292502 1 + G A UCEC 72292502 - 72292482 72292522 41 AGGAAGAGGGGCCGCTTGTACACCTCCTCCGTCACATGCAA AGGAAGAGGGGCCGCTTGTATACCTCCTCCGTCACATGCAA Direct Gain 0 0.956974882869691 0 0.995489239692688 prediction 0.913949765739381 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72292502 chr10:72292502 synonymous SNV . 0 21 hPsi_associated_SNPs_104724 0 0 0 0 0 Ribosome 0 0.438717413868179 0.990978479385376 0 hPsi_site_3684 iPseU_CNN:0.990978479385376;iRNA_PseU:0 3685 chr22 37334391 37334391 1 + G A LIHC 37334391 - 37334371 37334411 41 GCCTGGTCTAGGTTCTTGATCTCAGGACCGGGTCCCGGGGA GCCTGGTCTAGGTTCTTGATTTCAGGACCGGGTCCCGGGGA Direct Gain 0 0.956968775482875 0 0.998535752296448 prediction 0.91393755096575 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37334391 chr22:37334391 synonymous SNV . 0 21 hPsi_associated_SNPs_104725 0 0 0 0 0 Endoplasmic reticulum 0 0.43871855579919 0.997071504592896 0 hPsi_site_3685 iPseU_CNN:0.997071504592896;iRNA_PseU:0 3686 chr3 130893655 130893655 1 + A T rs202173091 130893655 + 130893635 130893675 41 AGTGTTTTTTCCAAAGCTGGAATAGCCTGAGACTCTAGGGC AGTGTTTTTTCCAAAGCTGGTATAGCCTGAGACTCTAGGGC Direct Gain 0 0.956965005627613 0 0.999758303165436 prediction 0.913930011255225 Functional Gain - NEK11 ENSG00000114670 UTR3 Human protein_coding chr3:130893655 chr3:130893655 . . 0 21 hPsi_associated_SNPs_104726 0 0 0 0 1 chromatin 0 0.438716804929116 0.999516606330872 0 hPsi_site_3686 iPseU_CNN:0.999516606330872;iRNA_PseU:0 3687 chr12 57584591 57584591 1 + C T LUAD 57584591 + 57584571 57584611 41 GGACCCTCTTCCCCCAGCCTCATGTTCTGGACCAACTGGAA GGACCCTCTTCCCCCAGCCTTATGTTCTGGACCAACTGGAA Direct Gain 0 0.956964684152117 0 0.897783517837524 prediction 0.913929368304234 Functional Gain - LRP1 ENSG00000123384 CDS Human protein_coding chr12:57584591 chr12:57584591 synonymous SNV . 0 21 hPsi_associated_SNPs_104727 0 0 1 0 1 Exosome 0 0.438718596332585 0.795567035675048 0 hPsi_site_3687 iPseU_CNN:0.795567035675048;iRNA_PseU:0 3688 chr6 102376303 102376303 1 + G A COAD 102376303 - 102376283 102376323 41 CTGGTGGACAGTGCTTTGGGCATGAGCTCAGAACCTAACAG CTGGTGGACAGTGCTTTGGGTATGAGCTCAGAACCTAACAG Direct Gain 0 0.956958871247366 0 0.999981939792633 prediction 0.913917742494732 Functional Gain - GRIK2 ENSG00000164418 CDS Human protein_coding chr6:102376303 chr6:102376303 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104728 0 0 0 0 0 exosome 0 0.438725644331171 0.999963879585266 0 hPsi_site_3688 iPseU_CNN:0.999963879585266;iRNA_PseU:0 3689 chr17 78153074 78153074 1 + C T rs114584401 78153074 + 78153054 78153094 41 AGCAGTGGAGAAAAATTAGGCACAACCTGATATCCTCCCAC AGCAGTGGAGAAAAATTAGGTACAACCTGATATCCTCCCAC Direct Gain 0 0.956958360784282 0 0.999928593635559 prediction 0.913916721568563 Functional Gain - CARD14 ENSG00000141527 UTR5 Human protein_coding chr17:78153074 chr17:78153074 . . 0 21 hPsi_associated_SNPs_104729 0 0 0 1 0 nucleus 0 0.438718423745359 0.999857187271118 0 hPsi_site_3689 iPseU_CNN:0.999857187271118;iRNA_PseU:0 3690 chr19 6361602 6361602 1 + T A COAD 6361602 - 6361582 6361622 41 CCACCCGGGCCCCCCCTACCAATATTCCGGGCCACATCCCT CCACCCGGGCCCCCCCTACCTATATTCCGGGCCACATCCCT Direct Gain 0 0.956957033804244 0 0.998144030570984 prediction 0.913914067608489 Functional Gain - CLPP ENSG00000125656 CDS Human protein_coding chr19:6361602 chr19:6361602 stopgain 0.025 0 21 hPsi_associated_SNPs_104730 0 0 0 0 0 Cytosol 0 0.438666308001315 0.996288061141968 0 hPsi_site_3690 iPseU_CNN:0.996288061141968;iRNA_PseU:0 3691 chrX 17394301 17394301 1 + G T LUSC 17394301 + 17394281 17394321 41 GTGTCCTCCGGCAGCTCTCGGACGTGGCCCGGCACGCTTGC GTGTCCTCCGGCAGCTCTCGTACGTGGCCCGGCACGCTTGC Direct Gain 0 0.956952323608208 0 0.997307419776917 prediction 0.913904647216417 Functional Gain - NHS ENSG00000188158 CDS Human protein_coding chrX:17394301 chrX:17394301 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104731 0 0 0 0 0 nucleus 0 0.438718577410353 0.994614839553834 0 hPsi_site_3691 iPseU_CNN:0.994614839553834;iRNA_PseU:0 3692 chrX 57475049 57475049 1 + G T COAD 57475049 + 57475029 57475069 41 GCCTGCGTAAAGAGCTGGTGGATATGCTAGGTGATGATGGT GCCTGCGTAAAGAGCTGGTGTATATGCTAGGTGATGATGGT Direct Gain 0 0.956947139803389 0 0.260119795799255 prediction 0.913894279606777 Functional Gain - FAAH2 ENSG00000165591 CDS Human protein_coding chrX:57475049 chrX:57475049 nonsynonymous SNV 0.881 1 21 hPsi_associated_SNPs_104732 0 0 0 0 1 nucleus 0 0.438730738985383 0 0 hPsi_site_3692 iPseU_CNN:0;iRNA_PseU:0 3693 chr9 132345965 132345965 1 + C A rs41276764 132345965 - 132345945 132345985 41 AGAGAGACCAGCTCCTGGGGGTTGGGGGTTTTGCTCCTGAG AGAGAGACCAGCTCCTGGGGTTTGGGGGTTTTGCTCCTGAG Direct Gain 0 0.956946963000322 0 0.998618304729462 prediction 0.913893926000644 Functional Gain - LINC00963;NTMT1 ENSG00000227619 ncRNA_exonic Human lincRNA chr9:132345965 chr9:132345965 . . 0 21 hPsi_associated_SNPs_104733 0 0 0 0 0 unknown 0 0.438718592995918 0.997236609458924 0 hPsi_site_3693 iPseU_CNN:0.997236609458924;iRNA_PseU:0 3694 chr17 48356586 48356586 1 + C A SKCM 48356586 - 48356566 48356606 41 GGGAGGGGGTGGCTCTGTGGGAGTTGGGCCCAGGCTGGGCT GGGAGGGGGTGGCTCTGTGGTAGTTGGGCCCAGGCTGGGCT Direct Gain 0 0.956944322507072 0 0.955632090568542 prediction 0.913888645014144 Functional Gain - TMEM92 ENSG00000167105 CDS Human protein_coding chr17:48356586 chr17:48356586 nonsynonymous SNV 0.080 2 21 hPsi_associated_SNPs_104734 0 0 0 0 0 nucleolus 0 0.438718592995179 0.911264181137084 0 hPsi_site_3694 iPseU_CNN:0.911264181137084;iRNA_PseU:0 3695 chr9 140729621 140729621 1 + G A rs374734508 140729621 - 140729601 140729641 41 AGTGTGCGCTCCAGCCTGGGCACTGGGCCCGCGGTGAGGCC AGTGTGCGCTCCAGCCTGGGTACTGGGCCCGCGGTGAGGCC Direct Gain 0 0.956943864613314 0 0.999773144721985 prediction 0.913887729226629 Functional Gain - EHMT1 ENSG00000181090 UTR3 Human protein_coding chr9:140729621 chr9:140729621 . . 0 21 hPsi_associated_SNPs_104735 0 0 0 0 0 chromatin 0 0.438718043781778 0.99954628944397 0 hPsi_site_3695 iPseU_CNN:0.99954628944397;iRNA_PseU:0 3696 chr1 39924126 39924126 1 + C T UCEC 39924126 + 39924106 39924146 41 GGAAAAACATAGAGCCTACTCACGCGCCTTTCATAGAGAAA GGAAAAACATAGAGCCTACTTACGCGCCTTTCATAGAGAAA Direct Gain 0 0.956942113916927 0 0.997910618782043 prediction 0.913884227833854 Functional Gain - MACF1 ENSG00000127603 CDS Human protein_coding chr1:39924126 chr1:39924126 nonsynonymous SNV 0.013 3 21 hPsi_associated_SNPs_104736 0 0 1 0 2 Endoplasmic reticulum 0 0.438718418719047 0.995821237564086 0 hPsi_site_3696 iPseU_CNN:0.995821237564086;iRNA_PseU:0 3697 chr16 27079498 27079498 1 + G T COAD 27079498 + 27079478 27079518 41 AGTCAGCAGCATCCTGGTGGGACCCCCTGTACCAAAACTCA AGTCAGCAGCATCCTGGTGGTACCCCCTGTACCAAAACTCA Direct Gain 0 0.956921570076669 0 0.99975574016571 prediction 0.913843140153337 Functional Gain - C16orf82 ENSG00000234186 ncRNA_exonic Human protein_coding chr16:27079498 chr16:27079498 . . 0 21 hPsi_associated_SNPs_104737 0 0 0 0 0 unknown 0 0.43871856757776 0.99951148033142 0 hPsi_site_3697 iPseU_CNN:0.99951148033142;iRNA_PseU:0 3698 chr3 50310680 50310680 1 + C T BLCA 50310680 + 50310660 50310700 41 GCAGCGCGTGGGTCTCGCATCAGGAGGCAAGGCCAGGACCC GCAGCGCGTGGGTCTCGCATTAGGAGGCAAGGCCAGGACCC Direct Gain 0 0.956916456469597 0 0.990222036838531 prediction 0.913832912939194 Functional Gain - MIR6872 ENSG00000012171 ncRNA_exonic Human protein_coding chr3:50310680 chr3:50310680 . . 0 21 hPsi_associated_SNPs_104738 0 0 1 0 1 unknown 0 0.438804180428666 0.980444073677062 0 hPsi_site_3698 iPseU_CNN:0.980444073677062;iRNA_PseU:0 3699 chr3 89391122 89391122 1 + G T UCEC 89391122 + 89391102 89391142 41 ACCAACACCACGGTGACAGTGACAGACCTTCTGGCACATAC ACCAACACCACGGTGACAGTTACAGACCTTCTGGCACATAC Direct Gain 0 0.956909161293389 0 0.999841570854187 prediction 0.913818322586778 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89391122 chr3:89391122 synonymous SNV . 0 21 hPsi_associated_SNPs_104739 0 0 0 1 0 Ribosome 0 0.453785903224844 0.999683141708374 0 hPsi_site_3699 iPseU_CNN:0.999683141708374;iRNA_PseU:0 3700 chr7 48467402 48467402 1 + C T LIHC 48467402 + 48467382 48467422 41 AAGATTCCAACAAGAAATCTCACATTGCCCTGGGGACTGAG AAGATTCCAACAAGAAATCTTACATTGCCCTGGGGACTGAG Direct Gain 0 0.956902772715293 0 0.991913497447968 prediction 0.913805545430586 Functional Gain - ABCA13 ENSG00000179869 CDS Human protein_coding chr7:48467402 chr7:48467402 nonsynonymous SNV 0.054 1 21 hPsi_associated_SNPs_104740 0 0 0 0 2 Nucleus 0 0.438718566930434 0.983826994895936 0 hPsi_site_3700 iPseU_CNN:0.983826994895936;iRNA_PseU:0 3701 chr11 75480097 75480097 1 + G A rs146363434 75480097 - 75480077 75480117 41 GTGAGAGCGCTGGCTCCGGTCAGCCTCGGCCTGACGCTCGC GTGAGAGCGCTGGCTCCGGTTAGCCTCGGCCTGACGCTCGC Direct Gain 0 0.956902761057148 0 0.999911546707153 prediction 0.913805522114296 Functional Gain - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75480097 chr11:75480097 nonsynonymous SNV 0.089 0 21 hPsi_associated_SNPs_104741 0 0 0 0 0 Ribosome 0 0.439119443601182 0.999823093414306 0 hPsi_site_3701 iPseU_CNN:0.999823093414306;iRNA_PseU:0 3702 chr11 111796789 111796789 1 + G T LUAD 111796789 + 111796769 111796809 41 ACAGCAACTTACATTATGCTGACATTCAAGTGTGCAGCCGT ACAGCAACTTACATTATGCTTACATTCAAGTGTGCAGCCGT Direct Gain 0 0.956898824436356 0 0.999968230724335 prediction 0.913797648872712 Functional Gain - C11orf52 ENSG00000149300 CDS Human protein_coding chr11:111796789 chr11:111796789 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_104742 0 0 0 0 0 exosome 0 0.438727632400022 0.99993646144867 0 hPsi_site_3702 iPseU_CNN:0.99993646144867;iRNA_PseU:0 3703 chr17 27936431 27936431 1 + G A LUSC 27936431 - 27936411 27936451 41 CTGCAGCCTCACCTTAGCTTCATACCCATTCACCATCTCCG CTGCAGCCTCACCTTAGCTTTATACCCATTCACCATCTCCG Direct Gain 0 0.956898294259437 0 0.993724942207336 prediction 0.913796588518873 Functional Gain - ANKRD13B ENSG00000198720 CDS Human protein_coding chr17:27936431 chr17:27936431 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_104743 0 0 0 0 0 chromatin 0 0.438918906025066 0.987449884414672 0 hPsi_site_3703 iPseU_CNN:0.987449884414672;iRNA_PseU:0 3704 chr2 71829919 71829919 1 + C A LUSC 71829919 - 71829899 71829939 41 TCACCTCATCCAGGATCCTTGATGTCTCCTGCACCTGGCCC TCACCTCATCCAGGATCCTTTATGTCTCCTGCACCTGGCCC Direct Gain 0 0.956896275622761 0 0.906724095344543 prediction 0.913792551245523 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71829919 chr2:71829919 stopgain 0.151 0 21 hPsi_associated_SNPs_104744 0 0 0 0 0 Nucleus 0 0.438730736735098 0.813448190689086 0 hPsi_site_3704 iPseU_CNN:0.813448190689086;iRNA_PseU:0 3705 chr16 23364391 23364391 1 + G A UCEC 23364391 - 23364371 23364411 41 CCCAGGGACCACTTACTAGTCTCATGGCCATTTTGCACCCG CCCAGGGACCACTTACTAGTTTCATGGCCATTTTGCACCCG Direct Gain 0 0.956894707126768 0 0.999999940395355 prediction 0.913789414253536 Functional Gain - SCNN1B ENSG00000168447 CDS Human protein_coding chr16:23364391 chr16:23364391 nonsynonymous SNV 0.933 1 21 hPsi_associated_SNPs_104745 0 0 0 0 0 exosome 0 0.438718663020109 0.99999988079071 0 hPsi_site_3705 iPseU_CNN:0.99999988079071;iRNA_PseU:0 3706 chr5 161277823 161277823 1 + A T KIRC 161277823 + 161277803 161277843 41 TGCTCCAGCCCGCGATGAGGAAAAGTCCAGGTCTGTCTGAC TGCTCCAGCCCGCGATGAGGTAAAGTCCAGGTCTGTCTGAC Direct Gain 0 0.956889471230778 0 0.999948382377625 prediction 0.913778942461556 Functional Gain - GABRA1 ENSG00000022355 CDS Human protein_coding chr5:161277823 chr5:161277823 stopgain 1.000 0 21 hPsi_associated_SNPs_104746 0 0 0 0 2 unknown 0 0.43857631557564 0.99989676475525 0 hPsi_site_3706 iPseU_CNN:0.99989676475525;iRNA_PseU:0 3707 chr11 62434258 62434258 1 + C T LUSC 62434258 + 62434238 62434278 41 GAACCTGGGGGCTGTGGCTTCTTCAGGCTCTTTCCAACTAC GAACCTGGGGGCTGTGGCTTTTTCAGGCTCTTTCCAACTAC Direct Gain 0 0.956886648862801 0 0.771636486053467 prediction 0.913773297725602 Functional Gain - METTL12 ENSG00000214756 CDS Human protein_coding chr11:62434258 chr11:62434258 nonsynonymous SNV 0.037 1 21 hPsi_associated_SNPs_104747 0 0 0 0 0 Cytosol 0 0.438723722045866 0.543272972106934 0 hPsi_site_3707 iPseU_CNN:0.543272972106934;iRNA_PseU:0 3708 chr18 9256432 9256432 1 + C T BLCA 9256432 + 9256412 9256452 41 AGATAAGCCTAAACCTAAGTCATCACCAGCATCAAAAGATA AGATAAGCCTAAACCTAAGTTATCACCAGCATCAAAAGATA Direct Gain 0 0.956873491316914 0 0.588561773300171 prediction 0.913746982633827 Functional Gain - ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9256432 chr18:9256432 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_104748 0 0 1 0 0 Cytosol 0 0.438718948382153 0.177123546600342 0 hPsi_site_3708 iPseU_CNN:0.177123546600342;iRNA_PseU:0 3709 chr19 57932133 57932133 1 + G T UCEC 57932133 + 57932113 57932153 41 AATGTGGGAAGTTCTTTATGGACACTTCCACACTCATTATT AATGTGGGAAGTTCTTTATGTACACTTCCACACTCATTATT Direct Gain 0 0.956868920735051 0 0.998546719551086 prediction 0.913737841470101 Functional Gain - ZNF17 ENSG00000186272 CDS Human protein_coding chr19:57932133 chr19:57932133 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_104749 0 0 1 0 0 nucleus 0 0.438718653021149 0.997093439102172 0 hPsi_site_3709 iPseU_CNN:0.997093439102172;iRNA_PseU:0 3710 chr2 71908217 71908217 1 + G A SKCM 71908217 - 71908197 71908237 41 GGGTCCTCAAGCTTAGGGTTCATGTTGGGCTCATCCCGGCC GGGTCCTCAAGCTTAGGGTTTATGTTGGGCTCATCCCGGCC Direct Gain 0 0.956865843672061 0 0.960868000984192 prediction 0.913731687344122 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71908217 chr2:71908217 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_104750 0 0 0 0 0 Nucleus 0 0.438718592995094 0.921736001968384 0 hPsi_site_3710 iPseU_CNN:0.921736001968384;iRNA_PseU:0 3711 chr17 56833454 56833454 1 + G A SARC 56833454 - 56833434 56833474 41 GGTTCGGGTTCGGGTTCCGGCTCCGGCTCGCCGCCGCCGCA GGTTCGGGTTCGGGTTCCGGTTCCGGCTCGCCGCCGCCGCA Direct Gain 0 0.95686482355342 0 0.997981667518616 prediction 0.913729647106841 Functional Gain - PPM1E ENSG00000175175 CDS Human protein_coding chr17:56833454 chr17:56833454 synonymous SNV . 0 21 hPsi_associated_SNPs_104751 0 0 0 0 0 Cytosol 0 0.438718592997999 0.995963335037232 0 hPsi_site_3711 iPseU_CNN:0.995963335037232;iRNA_PseU:0 3712 chr17 38100624 38100624 1 + G T rs536611185 38100624 + 38100604 38100644 41 GTGGGGCTACAGATCCAAGTGAACCTATCCGCAAACCCATG GTGGGGCTACAGATCCAAGTTAACCTATCCGCAAACCCATG Direct Gain 0 0.956863686354061 0 0.99974799156189 prediction 0.913727372708123 Functional Gain - LRRC3C ENSG00000204913 CDS Human protein_coding chr17:38100624 chr17:38100624 synonymous SNV . 0 21 hPsi_associated_SNPs_104752 0 0 0 0 0 exosome 0 0.439323952088619 0.99949598312378 0 hPsi_site_3712 iPseU_CNN:0.99949598312378;iRNA_PseU:0 3713 chr20 44053201 44053201 1 + G A LGG 44053201 - 44053181 44053221 41 ACAGGCTGTTGAAGAGGGGACTCTCTTCCCAGTCCACTGGC ACAGGCTGTTGAAGAGGGGATTCTCTTCCCAGTCCACTGGC Direct Gain 0 0.956833128724228 0 0.000743120908737183 prediction 0.913666257448456 Functional Gain - PIGT ENSG00000124155 CDS Human protein_coding chr20:44053201 chr20:44053201 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_104753 0 0 0 0 0 Ribosome 0 0.438792933623697 0 0 hPsi_site_3713 iPseU_CNN:0;iRNA_PseU:0 3714 chr3 131101249 131101249 1 + C T UCEC 131101249 + 131101229 131101269 41 AAGCATCCCTGGAGAAAAGTCTTTGCCCCTCTGACCTTGCC AAGCATCCCTGGAGAAAAGTTTTTGCCCCTCTGACCTTGCC Direct Gain 0 0.956829792980522 0 0.953184247016907 prediction 0.913659585961043 Functional Gain - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131101249 chr3:131101249 synonymous SNV . 0 21 hPsi_associated_SNPs_104754 0 0 0 0 0 Ribosome 0 0.438718573041428 0.906368494033814 0 hPsi_site_3714 iPseU_CNN:0.906368494033814;iRNA_PseU:0 3715 chr14 24631447 24631447 1 + G A BRCA 24631447 - 24631427 24631467 41 GAACATGGTCTTAGCTGTATCATCCCAGCACACTCCGGGAA GAACATGGTCTTAGCTGTATTATCCCAGCACACTCCGGGAA Direct Gain 0 0.956826540710354 0 0.977056086063385 prediction 0.913653081420707 Functional Gain - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24631447 chr14:24631447 nonsynonymous SNV 0.788 3 21 hPsi_associated_SNPs_104755 0 0 0 0 0 Cytosol 0 0.438701498102085 0.95411217212677 0 hPsi_site_3715 iPseU_CNN:0.95411217212677;iRNA_PseU:0 3716 chrX 152225719 152225719 1 + C A UCEC 152225719 - 152225699 152225739 41 GAAGCGGTTCAGTCTGTTGAGAAATTCCCCATCTGAGTTAC GAAGCGGTTCAGTCTGTTGATAAATTCCCCATCTGAGTTAC Direct Gain 0 0.956825707057163 0 0.836338996887207 prediction 0.913651414114326 Functional Gain - PNMA3 ENSG00000183837 CDS Human protein_coding chrX:152225719 chrX:152225719 nonsynonymous SNV 0.069 0 21 hPsi_associated_SNPs_104756 0 0 0 0 0 exosome 0 0.439667773057694 0.672677993774414 0 hPsi_site_3716 iPseU_CNN:0.672677993774414;iRNA_PseU:0 3717 chr11 93796772 93796772 1 + T A CESC 93796772 - 93796752 93796792 41 ATCGGCTGGAGTAGGTGCATATTCTTCTCTCACCGGCCAGA ATCGGCTGGAGTAGGTGCATTTTCTTCTCTCACCGGCCAGA Direct Gain 0 0.956825039285608 0 0.999557495117188 prediction 0.913650078571217 Functional Gain - HEPHL1 ENSG00000181333 CDS Human protein_coding chr11:93796772 chr11:93796772 nonsynonymous SNV 0.958 3 21 hPsi_associated_SNPs_104757 0 0 0 0 0 exosome 0 0.439148555703962 0.999114990234376 0 hPsi_site_3717 iPseU_CNN:0.999114990234376;iRNA_PseU:0 3718 chr20 61711545 61711545 1 + G A UCEC 61711545 - 61711525 61711565 41 GGCTTCAAACAACACAGATTCACTGTCTGAGTTCTGAGGCC GGCTTCAAACAACACAGATTTACTGTCTGAGTTCTGAGGCC Direct Gain 0 0.956822171405127 0 0.961517095565796 prediction 0.913644342810253 Functional Gain - LINC01749 ENSG00000272259 ncRNA_exonic Human lincRNA chr20:61711545 chr20:61711545 . . 0 21 hPsi_associated_SNPs_104758 0 0 0 0 0 unknown 0 0.438718593004251 0.923034191131592 0 hPsi_site_3718 iPseU_CNN:0.923034191131592;iRNA_PseU:0 3719 chr15 86287025 86287025 1 + G A LGG 86287025 - 86287005 86287045 41 GAGCGGCTGGTTTTGTTCTTCTTTTTTTTCTCCTTCTTTTC GAGCGGCTGGTTTTGTTCTTTTTTTTTTTCTCCTTCTTTTC Direct Gain 0 0.956820508346621 0 0.912952601909637 prediction 0.913641016693242 Functional Gain - AKAP13 ENSG00000170776 CDS Human protein_coding chr15:86287025 chr15:86287025 synonymous SNV . 0 21 hPsi_associated_SNPs_104759 0 0 1 0 0 Ribosome 0 0.438718591944186 0.825905203819274 0 hPsi_site_3719 iPseU_CNN:0.825905203819274;iRNA_PseU:0 3720 chr13 25341412 25341412 1 + C T ACC 25341412 + 25341392 25341432 41 TAAGAATTTCATCAATAGGTCACCATTGTGAACTTCAATGT TAAGAATTTCATCAATAGGTTACCATTGTGAACTTCAATGT Direct Gain 0 0.956806465981607 0 0.909722566604614 prediction 0.913612931963214 Functional Gain - RNF17 ENSG00000132972 CDS Human protein_coding chr13:25341412 chr13:25341412 nonsynonymous SNV 0.347 2 21 hPsi_associated_SNPs_104760 0 0 0 0 2 exosome 0 0.437942649673711 0.819445133209228 0 hPsi_site_3720 iPseU_CNN:0.819445133209228;iRNA_PseU:0 3721 chrX 153248410 153248410 1 + C T rs1045938 153248410 + 153248390 153248430 41 GTGTGATGATATGCACTGATCACACAAGACTGCCCTTTCCT GTGTGATGATATGCACTGATTACACAAGACTGCCCTTTCCT Direct Gain 0 0.956806129528193 0 0.983372569084167 prediction 0.913612259056386 Functional Gain - TMEM187 ENSG00000177854 UTR3 Human protein_coding chrX:153248410 chrX:153248410 . . 0 21 hPsi_associated_SNPs_104761 0 0 1 0 0 Endoplasmic reticulum 0 0.452928680875741 0.966745138168334 0 hPsi_site_3721 iPseU_CNN:0.966745138168334;iRNA_PseU:0 3722 chr1 35227260 35227260 1 + C T SKCM 35227260 + 35227240 35227280 41 TGGACGTACTTGCTGAGCCTCATCTTCAAGGCCGCCGTGGA TGGACGTACTTGCTGAGCCTTATCTTCAAGGCCGCCGTGGA Direct Gain 0 0.956805069752091 0 0.999997735023499 prediction 0.913610139504182 Functional Gain - GJB4 ENSG00000189433 CDS Human protein_coding chr1:35227260 chr1:35227260 synonymous SNV . 0 21 hPsi_associated_SNPs_104762 0 0 0 0 0 exosome 0 0.439711592807578 0.999995470046998 0 hPsi_site_3722 iPseU_CNN:0.999995470046998;iRNA_PseU:0 3723 chr15 89388905 89388905 1 + C T rs16942341 89388905 + 89388885 89388925 41 GTAAAGCCCATCTTCGAGGTCTCCCCCAGTCCCCTGGAACC GTAAAGCCCATCTTCGAGGTTTCCCCCAGTCCCCTGGAACC Direct Gain 0 0.956805043789494 0 0.98761785030365 prediction 0.913610087578988 Functional Gain - ACAN ENSG00000157766 CDS Human protein_coding chr15:89388905 chr15:89388905 synonymous SNV . 0 21 hPsi_associated_SNPs_104763 0 1 0 0 0 exosome 0 0.438718593033194 0.9752357006073 0 hPsi_site_3723 iPseU_CNN:0.9752357006073;iRNA_PseU:0 3724 chr2 46707879 46707879 1 + G A UCEC 46707879 - 46707859 46707899 41 CGGGGCGCCGCCTCTTGCTGCAGCTGCTCCATCACCACCTC CGGGGCGCCGCCTCTTGCTGTAGCTGCTCCATCACCACCTC Direct Gain 0 0.95680101308874 0 0.999976634979248 prediction 0.91360202617748 Functional Gain - TMEM247 ENSG00000187600 CDS Human protein_coding chr2:46707879 chr2:46707879 synonymous SNV . 0 21 hPsi_associated_SNPs_104764 0 0 0 0 0 unknown 0 0.438710836570177 0.999953269958496 0 hPsi_site_3724 iPseU_CNN:0.999953269958496;iRNA_PseU:0 3725 chr17 12656030 12656030 1 + C T SARC 12656030 + 12656010 12656050 41 GGGTCCCTGCCGGACACCTTCAATGATGCCTCCCCCTCCTT GGGTCCCTGCCGGACACCTTTAATGATGCCTCCCCCTCCTT Direct Gain 0 0.956798479311735 0 0.934197902679443 prediction 0.91359695862347 Functional Gain - MYOCD ENSG00000141052;ENSG00000273452 CDS Human other chr17:12656030 chr17:12656030 synonymous SNV . 0 21 hPsi_associated_SNPs_104765 0 0 0 0 0 exosome 0 0.43871859310557 0.868395805358886 0 hPsi_site_3725 iPseU_CNN:0.868395805358886;iRNA_PseU:0 3726 chr5 42718878 42718878 1 + C T SKCM 42718878 + 42718858 42718898 41 TTAAAAGGGGAAGCAGATCTCTTATGCCTTGACCAGAAGAA TTAAAAGGGGAAGCAGATCTTTTATGCCTTGACCAGAAGAA Direct Gain 0 0.956785265043191 0 0.901724576950073 prediction 0.913570530086382 Functional Gain - GHR ENSG00000112964 CDS Human protein_coding chr5:42718878 chr5:42718878 synonymous SNV . 0 21 hPsi_associated_SNPs_104766 0 0 0 0 0 Nucleus 0 0.438453716864908 0.803449153900146 0 hPsi_site_3726 iPseU_CNN:0.803449153900146;iRNA_PseU:0 3727 chr1 186957549 186957549 1 + G T LUSC 186957549 + 186957529 186957569 41 TGAAAGCATTGAATATAGAAGACAGAATCCATCTCGTTGCT TGAAAGCATTGAATATAGAATACAGAATCCATCTCGTTGCT Direct Gain 0 0.956784184504495 0 0.898026585578918 prediction 0.91356836900899 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186957549 chr1:186957549 nonsynonymous SNV 0.981 2 21 hPsi_associated_SNPs_104767 0 0 0 0 1 Nucleus 0 0.438684576181608 0.796053171157836 0 hPsi_site_3727 iPseU_CNN:0.796053171157836;iRNA_PseU:0 3728 chr4 71232578 71232578 1 + C T GBM 71232578 + 71232558 71232598 41 TGGTCCAGGGAGAATTCAATCACACTCTCTTCCTCCTCCTT TGGTCCAGGGAGAATTCAATTACACTCTCTTCCTCCTCCTT Direct Gain 0 0.956777401237363 0 0.999366641044617 prediction 0.913554802474727 Functional Gain - SMR3A ENSG00000109208 CDS Human protein_coding chr4:71232578 chr4:71232578 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104768 0 0 0 0 0 unknown 0 0.438718563433174 0.998733282089234 0 hPsi_site_3728 iPseU_CNN:0.998733282089234;iRNA_PseU:0 3729 chr7 150418008 150418008 1 + G A LUSC 150418008 - 150417988 150418028 41 TTAGGACCTGCGCTGTCAGTCAGGCCCGACCTCCGCAACGG TTAGGACCTGCGCTGTCAGTTAGGCCCGACCTCCGCAACGG Direct Gain 0 0.956773451391371 0 0.999865293502808 prediction 0.913546902782741 Functional Gain - GIMAP1 ENSG00000213203 CDS Human protein_coding chr7:150418008 chr7:150418008 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_104769 0 0 0 0 0 exosome 0 0.438713681055455 0.999730587005616 0 hPsi_site_3729 iPseU_CNN:0.999730587005616;iRNA_PseU:0 3730 chr12 104341191 104341191 1 + G A BLCA 104341191 - 104341171 104341211 41 TACCTTTGCTGTTTCTTCTTCTTCATCTGTTCCCACATCCA TACCTTTGCTGTTTCTTCTTTTTCATCTGTTCCCACATCCA Direct Gain 0 0.956763636357434 0 0.00127068161964417 prediction 0.913527272714868 Functional Gain - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104341191 chr12:104341191 nonsynonymous SNV 0.794 0 21 hPsi_associated_SNPs_104770 0 0 0 0 0 Nucleus 0 0.438717601771933 0 0 hPsi_site_3730 iPseU_CNN:0;iRNA_PseU:0 3731 chr6 31599733 31599733 1 + G A BLCA 31599733 - 31599713 31599753 41 GCGCCGCTTGGGGATTTCCTCATACTCTGAACCCTCGCTCC GCGCCGCTTGGGGATTTCCTTATACTCTGAACCCTCGCTCC Direct Gain 0 0.956760822501381 0 0.996068954467773 prediction 0.913521645002762 Functional Gain - PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31599733 chr6:31599733 nonsynonymous SNV 0.983 4 21 hPsi_associated_SNPs_104771 0 0 0 0 0 Ribosome 0 0.43871974784183 0.992137908935546 0 hPsi_site_3731 iPseU_CNN:0.992137908935546;iRNA_PseU:0 3732 chr2 46985765 46985765 1 + G A UCEC 46985765 - 46985745 46985785 41 GACAAACATCTGTTGGAGTTCATGTCCACATTTTCACTACG GACAAACATCTGTTGGAGTTTATGTCCACATTTTCACTACG Direct Gain 0 0.95675891984776 0 0.960790157318115 prediction 0.91351783969552 Functional Gain - SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46985765 chr2:46985765 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_104772 0 0 0 0 0 Cytosol 0 0.438737473306461 0.92158031463623 0 hPsi_site_3732 iPseU_CNN:0.92158031463623;iRNA_PseU:0 3733 chr6 38885030 38885030 1 + G T LUAD 38885030 + 38885010 38885050 41 TATAGACTATCAAGCCAAATGATATTGCCACAGTCAGGAAA TATAGACTATCAAGCCAAATTATATTGCCACAGTCAGGAAA Direct Gain 0 0.956758111493115 0 0.279767572879791 prediction 0.913516222986229 Functional Gain - DNAH8 ENSG00000124721 CDS Human protein_coding chr6:38885030 chr6:38885030 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104773 0 0 0 0 1 chromatin 0 0.438718590270119 0 0 hPsi_site_3733 iPseU_CNN:0;iRNA_PseU:0 3734 chr16 22130322 22130322 1 + G A BLCA 22130322 - 22130302 22130342 41 CATGGTGCAGGTGAGCGCCTCACAGGGGCTGCTGTGCTGCA CATGGTGCAGGTGAGCGCCTTACAGGGGCTGCTGTGCTGCA Direct Gain 0 0.95675783685224 0 0.34978985786438 prediction 0.913515673704479 Functional Gain - VWA3A ENSG00000175267 CDS Human protein_coding chr16:22130322 chr16:22130322 nonsynonymous SNV 0.043 0 21 hPsi_associated_SNPs_104774 0 0 0 0 0 Endoplasmic reticulum 0 0.4388601583973 0 0 hPsi_site_3734 iPseU_CNN:0;iRNA_PseU:0 3735 chrX 153694059 153694059 1 + C A LUAD 153694059 - 153694039 153694079 41 CCAGCCACAGTTGAAGCGGGGATCAGCCTTGAGGCAGAGGC CCAGCCACAGTTGAAGCGGGTATCAGCCTTGAGGCAGAGGC Direct Gain 0 0.956752999110217 0 0.474142342805862 prediction 0.913505998220435 Functional Gain - PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153694059 chrX:153694059 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_104775 0 0 0 0 0 Endoplasmic reticulum 0 0.438676162305887 0 0 hPsi_site_3735 iPseU_CNN:0;iRNA_PseU:0 3736 chr4 155014 155014 1 + T A BLCA 155014 - 154994 155034 41 TTAGGCGTGAGAGCACGTGAAATGATTTGCCACATTCTTTA TTAGGCGTGAGAGCACGTGATATGATTTGCCACATTCTTTA Direct Gain 0 0.95674021200751 0 0.977448999881744 prediction 0.91348042401502 Functional Gain - ZNF718 ENSG00000250312 ncRNA_exonic Human protein_coding chr4:155014 chr4:155014 . 0.056 2 21 hPsi_associated_SNPs_104776 0 0 0 0 0 Cytosol 0 0.438734458684618 0.954897999763488 0 hPsi_site_3736 iPseU_CNN:0.954897999763488;iRNA_PseU:0 3737 chr11 131781481 131781481 1 + G A COAD 131781481 - 131781461 131781501 41 CATAGCTTTGGGGAAGGTGGCATCTCCGCTGCGCACGGGCA CATAGCTTTGGGGAAGGTGGTATCTCCGCTGCGCACGGGCA Direct Gain 0 0.956736866715607 0 0.994700372219086 prediction 0.913473733431213 Functional Gain - NTM ENSG00000182667 CDS Human protein_coding chr11:131781481 chr11:131781481 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104777 0 0 0 0 0 Cytosol 0 0.43870467394653 0.989400744438172 0 hPsi_site_3737 iPseU_CNN:0.989400744438172;iRNA_PseU:0 3738 chr3 58094970 58094970 1 + C T SKCM 58094970 + 58094950 58094990 41 GGACGGCACATATGCATGCTCATACACCCCGGTGAAGGCCA GGACGGCACATATGCATGCTTATACACCCCGGTGAAGGCCA Direct Gain 0 0.956733963837761 0 0.949373066425323 prediction 0.913467927675522 Functional Gain - FLNB ENSG00000136068 CDS Human protein_coding chr3:58094970 chr3:58094970 nonsynonymous SNV 0.798 2 21 hPsi_associated_SNPs_104778 0 0 1 0 1 Cytosol 0 0.438720468659578 0.898746132850646 0 hPsi_site_3738 iPseU_CNN:0.898746132850646;iRNA_PseU:0 3739 chr11 59865476 59865476 1 + C A rs115532097 59865476 - 59865456 59865496 41 AGAGGTCCTGGTAAACCAGGGTTAAGAGTCTGTATGTGAAC AGAGGTCCTGGTAAACCAGGTTTAAGAGTCTGTATGTGAAC Direct Gain 0 0.956721125268538 0 0.999507129192352 prediction 0.913442250537077 Functional Gain - MS4A2 ENSG00000149534;ENSG00000254952 intergenic Human other chr11:59865476 chr11:59865476 . . 0 21 hPsi_associated_SNPs_104779 0 0 0 0 0 exosome 0 0.438777179590179 0.999014258384704 0 hPsi_site_3739 iPseU_CNN:0.999014258384704;iRNA_PseU:0 3740 chr7 150748970 150748970 1 + G A SKCM 150748970 - 150748950 150748990 41 ACCAAGCAGCTCTGACATCTCATAGGCCTTCTTCTGCTCCA ACCAAGCAGCTCTGACATCTTATAGGCCTTCTTCTGCTCCA Direct Gain 0 0.956720943030892 0 0.93694019317627 prediction 0.913441886061783 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150748970 chr7:150748970 nonsynonymous SNV 0.883 3 21 hPsi_associated_SNPs_104780 0 0 0 0 0 exosome 0 0.436120784103097 0.87388038635254 0 hPsi_site_3740 iPseU_CNN:0.87388038635254;iRNA_PseU:0 3741 chr8 42260891 42260891 1 + C A OV 42260891 - 42260871 42260911 41 CTGTCCAAGCAAGGTTTATGGATGTTTCAATCTTCTCATTC CTGTCCAAGCAAGGTTTATGTATGTTTCAATCTTCTCATTC Direct Gain 0 0.956716462823893 0 0.790931344032288 prediction 0.913432925647785 Functional Gain - VDAC3 ENSG00000078668 CDS Human protein_coding chr8:42260891 chr8:42260891 nonsynonymous SNV 0.990 3 21 hPsi_associated_SNPs_104781 0 0 0 0 0 Ribosome 0 0.438718434813439 0.581862688064576 0 hPsi_site_3741 iPseU_CNN:0.581862688064576;iRNA_PseU:0 3742 chrX 74494186 74494186 1 + G T BLCA 74494186 + 74494166 74494206 41 CCGAGCAGCTGCGACCTGGCGATCTGATCCTGGACCACGCA CCGAGCAGCTGCGACCTGGCTATCTGATCCTGGACCACGCA Direct Gain 0 0.95671573036235 0 0.996921181678772 prediction 0.913431460724701 Functional Gain - UPRT ENSG00000094841 CDS Human protein_coding chrX:74494186 chrX:74494186 nonsynonymous SNV 0.005 3 21 hPsi_associated_SNPs_104782 0 0 0 0 0 Ribosome 0 0.438718593004901 0.993842363357544 0 hPsi_site_3742 iPseU_CNN:0.993842363357544;iRNA_PseU:0 3743 chr9 135826622 135826622 1 + G A rs537321830 135826622 - 135826602 135826642 41 TTAGCAGAAAAGCTGAATGGCACATTTTTCATGGCCTCTGC TTAGCAGAAAAGCTGAATGGTACATTTTTCATGGCCTCTGC Direct Gain 0 0.956713197863831 0 0.912818789482117 prediction 0.913426395727662 Functional Gain - GFI1B ENSG00000233800 ncRNA_exonic Human other chr9:135826622 chr9:135826622 . . 0 21 hPsi_associated_SNPs_104783 0 0 0 0 0 chromatin 0 0.438718095875468 0.825637578964234 0 hPsi_site_3743 iPseU_CNN:0.825637578964234;iRNA_PseU:0 3744 chr8 67026483 67026483 1 + G A rs553743236 67026483 - 67026463 67026503 41 GGAAAACTGGAGGATGCGGGCATCGATCCCGCTACCTCTCG GGAAAACTGGAGGATGCGGGTATCGATCCCGCTACCTCTCG Direct Gain 0 0.956709054516629 0 0.999992251396179 prediction 0.913418109033258 Functional Gain - DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026483 chr8:67026483 . . 0 21 hPsi_associated_SNPs_104784 0 0 0 0 0 unknown 0 0.438823744522525 0.999984502792358 0 hPsi_site_3744 iPseU_CNN:0.999984502792358;iRNA_PseU:0 3745 chr5 169533045 169533045 1 + G A SARC 169533045 - 169533025 169533065 41 AAGTTCTCATAGTAGAGGTTCATCTCGGGGGGCTCCTGGCC AAGTTCTCATAGTAGAGGTTTATCTCGGGGGGCTCCTGGCC Direct Gain 0 0.95670894695075 0 0.925001978874207 prediction 0.913417893901501 Functional Gain - FOXI1 ENSG00000168269 CDS Human protein_coding chr5:169533045 chr5:169533045 nonsynonymous SNV 0.498 3 21 hPsi_associated_SNPs_104785 0 0 0 0 0 exosome 0 0.438718592995102 0.850003957748414 0 hPsi_site_3745 iPseU_CNN:0.850003957748414;iRNA_PseU:0 3746 chr3 121659821 121659821 1 + G A SKCM 121659821 - 121659801 121659841 41 TTCTTGGTCTCTAGTTTGATCATGTTCCCCTGGATGTGAGG TTCTTGGTCTCTAGTTTGATTATGTTCCCCTGGATGTGAGG Direct Gain 0 0.956707778131729 0 0.999323129653931 prediction 0.913415556263459 Functional Gain - SLC15A2 ENSG00000163406 CDS Human protein_coding chr3:121659821 chr3:121659821 nonsynonymous SNV 0.720 0 21 hPsi_associated_SNPs_104786 0 0 0 0 0 cytosol 0 0.43871859619453 0.998646259307862 0 hPsi_site_3746 iPseU_CNN:0.998646259307862;iRNA_PseU:0 3747 chr19 49378105 49378105 1 + G T UCEC 49378105 + 49378085 49378125 41 AAAGGCGGCTCAAGCGCCCAGAAACCCCTACTCATGATCCG AAAGGCGGCTCAAGCGCCCATAAACCCCTACTCATGATCCG Direct Gain 0 0.95670468183778 0 0.00170347094535828 prediction 0.91340936367556 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49378105 chr19:49378105 stopgain 0.006 0 21 hPsi_associated_SNPs_104787 0 0 1 0 1 Cytosol 0 0.438760467809084 0 0 hPsi_site_3747 iPseU_CNN:0;iRNA_PseU:0 3748 chr12 58113916 58113916 1 + C A OV 58113916 - 58113896 58113936 41 CCTCCGAGACGGAGCTTGGTGACCCGGACCCGGACTCTGTG CCTCCGAGACGGAGCTTGGTTACCCGGACCCGGACTCTGTG Direct Gain 0 0.95670435544838 0 0.999968409538269 prediction 0.91340871089676 Functional Gain - OS9 ENSG00000135506 CDS Human protein_coding chr12:58113916 chr12:58113916 synonymous SNV . 0 21 hPsi_associated_SNPs_104788 0 0 0 0 0 Nucleus 0 0.43871805555522 0.999936819076538 0 hPsi_site_3748 iPseU_CNN:0.999936819076538;iRNA_PseU:0 3749 chr14 23315110 23315110 1 + G A COAD 23315110 - 23315090 23315130 41 AGCACCACGGCAGCCGCGCTCACCGCCCCGCCGCCCTCCTC AGCACCACGGCAGCCGCGCTTACCGCCCCGCCGCCCTCCTC Direct Gain 0 0.956688163381196 0 0.97474730014801 prediction 0.913376326762393 Functional Gain - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23315110 chr14:23315110 synonymous SNV . 0 21 hPsi_associated_SNPs_104789 0 0 0 0 0 cytosol 0 0.437898756848599 0.94949460029602 0 hPsi_site_3749 iPseU_CNN:0.94949460029602;iRNA_PseU:0 3750 chr6 41065114 41065114 1 + G A CESC 41065114 - 41065094 41065134 41 GATCTGTGTCATTGCTTCTTCATCGGCTTGGTTTGGATCCT GATCTGTGTCATTGCTTCTTTATCGGCTTGGTTTGGATCCT Direct Gain 0 0.956685675713876 0 0.447488903999329 prediction 0.913371351427753 Functional Gain - NFYA ENSG00000001167 CDS Human protein_coding chr6:41065114 chr6:41065114 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_104790 0 0 0 0 0 Cytosol 0 0.438718582333692 0 0 hPsi_site_3750 iPseU_CNN:0;iRNA_PseU:0 3751 chr8 92307760 92307760 1 + C T BLCA 92307760 + 92307740 92307780 41 CCACACCACTTGGTTTCAGGCACCTTTGCCTTGACATCCTT CCACACCACTTGGTTTCAGGTACCTTTGCCTTGACATCCTT Direct Gain 0 0.956681421147183 0 0.673961460590363 prediction 0.913362842294366 Functional Gain - SLC26A7 ENSG00000147606 CDS Human protein_coding chr8:92307760 chr8:92307760 synonymous SNV . 0 21 hPsi_associated_SNPs_104791 0 0 0 0 1 membrane 0 0.438717014560715 0.347922921180726 0 hPsi_site_3751 iPseU_CNN:0.347922921180726;iRNA_PseU:0 3752 chr11 65628007 65628007 1 + G A rs61893865 65628007 - 65627987 65628027 41 CGCTGCTCTAAGTGGTTGGTCAGGGGCGCTGTCTCTAACGA CGCTGCTCTAAGTGGTTGGTTAGGGGCGCTGTCTCTAACGA Direct Gain 0 0.956678431781755 0 0.999989986419678 prediction 0.91335686356351 Functional Gain - MUS81 ENSG00000172732 UTR5 Human protein_coding chr11:65628007 chr11:65628007 . . 0 21 hPsi_associated_SNPs_104792 0 0 0 0 0 Ribosome 0 0.439043279332457 0.999979972839356 0 hPsi_site_3752 iPseU_CNN:0.999979972839356;iRNA_PseU:0 3753 chr16 30510512 30510512 1 + C A COAD 30510512 - 30510492 30510532 41 TTGATCTGGAAACAGATTGTGATATTAACTCCTTCTTTCAT TTGATCTGGAAACAGATTGTTATATTAACTCCTTCTTTCAT Direct Gain 0 0.956663788191901 0 0.921062827110291 prediction 0.913327576383802 Functional Gain - ITGAL ENSG00000005844 CDS Human protein_coding chr16:30510512 chr16:30510512 synonymous SNV . 0 21 hPsi_associated_SNPs_104793 0 0 0 0 0 Cytosol 0 0.437963686783988 0.842125654220582 0 hPsi_site_3753 iPseU_CNN:0.842125654220582;iRNA_PseU:0 3754 chr9 125513035 125513035 1 + G A SKCM 125513035 - 125513015 125513055 41 TAAATTCTGTCCTGTAATTTCTTCAAACCCCTCTTCATATC TAAATTCTGTCCTGTAATTTTTTCAAACCCCTCTTCATATC Direct Gain 0 0.956662346588815 0 0.998402118682861 prediction 0.913324693177629 Functional Gain - OR1L6 ENSG00000171459 CDS Human protein_coding chr9:125513035 chr9:125513035 synonymous SNV . 0 21 hPsi_associated_SNPs_104794 0 0 0 0 0 unknown 0 0.438718595139322 0.996804237365722 0 hPsi_site_3754 iPseU_CNN:0.996804237365722;iRNA_PseU:0 3755 chr6 159655264 159655264 1 + G A SKCM 159655264 - 159655244 159655284 41 GGTGGGGGGAGAGGTCGCTTCACAGGAGCCAGGCTCCCTCC GGTGGGGGGAGAGGTCGCTTTACAGGAGCCAGGCTCCCTCC Direct Gain 0 0.956656188234786 0 0.52483344078064 prediction 0.913312376469573 Functional Gain - FNDC1 ENSG00000164694 CDS Human protein_coding chr6:159655264 chr6:159655264 synonymous SNV . 0 21 hPsi_associated_SNPs_104795 0 0 0 0 0 Endoplasmic reticulum 0 0.438718607488554 0.04966688156128 0 hPsi_site_3755 iPseU_CNN:0.04966688156128;iRNA_PseU:0 3756 chr13 45589658 45589658 1 + G T UCEC 45589658 + 45589638 45589678 41 TGGGCCAAGGACTTTTAAGAGAAGAGCTGATGACACATCTG TGGGCCAAGGACTTTTAAGATAAGAGCTGATGACACATCTG Direct Gain 0 0.956654551553882 0 0.998337984085083 prediction 0.913309103107764 Functional Gain - GPALPP1 ENSG00000133114 CDS Human protein_coding chr13:45589658 chr13:45589658 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104796 0 0 1 0 2 cytosol 0 0.438717433420221 0.996675968170166 0 hPsi_site_3756 iPseU_CNN:0.996675968170166;iRNA_PseU:0 3757 chr11 121038819 121038819 1 + C A COAD 121038819 - 121038799 121038839 41 CTGGTGATGATGTTGCCAGTGTTGTTGGCGCTTTCGATCCA CTGGTGATGATGTTGCCAGTTTTGTTGGCGCTTTCGATCCA Direct Gain 0 0.956647728798524 0 0.999966263771057 prediction 0.913295457597047 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:121038819 chr11:121038819 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104797 0 0 0 0 0 exosome 0 0.419946947582186 0.999932527542114 0 hPsi_site_3757 iPseU_CNN:0.999932527542114;iRNA_PseU:0 3758 chr2 150061897 150061897 1 + A T LUSC 150061897 + 150061877 150061917 41 CCAAGAACATCAACTTCTATAATGTGAGGCCTCCTCTCGAC CCAAGAACATCAACTTCTATTATGTGAGGCCTCCTCTCGAC Direct Gain 0 0.956643992678712 0 0.416857481002808 prediction 0.913287985357425 Functional Gain - LYPD6B ENSG00000150556 CDS Human protein_coding chr2:150061897 chr2:150061897 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_104798 0 0 0 0 1 exosome 0 0.438728441413718 0 0 hPsi_site_3758 iPseU_CNN:0;iRNA_PseU:0 3759 chr14 23794476 23794476 1 + C T BLCA 23794476 + 23794456 23794496 41 GGGCCGGGCTAGAGCGACATCATGGTATTCCCCTTACTAAA GGGCCGGGCTAGAGCGACATTATGGTATTCCCCTTACTAAA Direct Gain 0 0.956634798288899 0 0.0101291239261627 prediction 0.913269596577798 Functional Gain - BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794476 chr14:23794476 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_104799 0 0 1 0 1 unknown 0 0.438718590900593 0 0 hPsi_site_3759 iPseU_CNN:0;iRNA_PseU:0 3760 chr7 5232780 5232780 1 + C T SKCM 5232780 + 5232760 5232800 41 GGGCATCAAGAGCAGCTGGTCTTGGCCGTCGCGCTGTTGTC GGGCATCAAGAGCAGCTGGTTTTGGCCGTCGCGCTGTTGTC Direct Gain 0 0.95663275288344 0 0.999466896057129 prediction 0.91326550576688 Functional Gain - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5232780 chr7:5232780 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_104800 0 0 1 0 2 Cytosol 0 0.438283826470309 0.998933792114258 0 hPsi_site_3760 iPseU_CNN:0.998933792114258;iRNA_PseU:0 3761 chr19 55086385 55086385 1 + C T SKCM 55086385 + 55086365 55086405 41 GGGTGGTCCTGGGCCATCTTCTCCGTGGGCCCCGTGAGCCC GGGTGGTCCTGGGCCATCTTTTCCGTGGGCCCCGTGAGCCC Direct Gain 0 0.956632355114223 0 0.803080081939697 prediction 0.913264710228445 Functional Gain - LILRA2 ENSG00000239998 CDS Human protein_coding chr19:55086385 chr19:55086385 synonymous SNV . 0 21 hPsi_associated_SNPs_104801 0 0 0 0 0 Cytosol 0 0.438718597670117 0.606160163879394 0 hPsi_site_3761 iPseU_CNN:0.606160163879394;iRNA_PseU:0 3762 chr1 86909493 86909493 1 + C A rs2390059 86909493 - 86909473 86909513 41 TTCAATTGATGGTGAGGTTTGACATTTTCACCTGTACTTTC TTCAATTGATGGTGAGGTTTTACATTTTCACCTGTACTTTC Direct Gain 0 0.956632185556821 0 0.637572646141052 prediction 0.913264371113642 Functional Gain - CLCA2 ENSG00000137975 CDS Human protein_coding chr1:86909493 chr1:86909493 synonymous SNV . 0 21 hPsi_associated_SNPs_104802 0 0 0 0 0 exosome 0 0.436658719608232 0.275145292282104 0 hPsi_site_3762 iPseU_CNN:0.275145292282104;iRNA_PseU:0 3763 chr13 92345593 92345593 1 + G A DLBC 92345593 - 92345573 92345613 41 AAATCTGTTTACAAATTCTTCAGGATTAACATCCGCACCAA AAATCTGTTTACAAATTCTTTAGGATTAACATCCGCACCAA Direct Gain 0 0.956629505923835 0 0.997547090053558 prediction 0.913259011847669 Functional Gain - GPC5 ENSG00000179399 CDS Human protein_coding chr13:92345593 chr13:92345593 nonsynonymous SNV 0.971 3 21 hPsi_associated_SNPs_104803 0 0 0 0 0 Nucleus 0 0.438976170272577 0.995094180107116 0 hPsi_site_3763 iPseU_CNN:0.995094180107116;iRNA_PseU:0 3764 chr19 7081448 7081448 1 + C A COAD 7081448 - 7081428 7081468 41 ACCTGGACAGGTACCTGAGAGAATTCCTCTCTCTTCTGTCA ACCTGGACAGGTACCTGAGATAATTCCTCTCTCTTCTGTCA Direct Gain 0 0.956617805172391 0 0.999999403953552 prediction 0.913235610344781 Functional Gain - ZNF557 ENSG00000130544 CDS Human protein_coding chr19:7081448 chr19:7081448 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_104804 0 0 0 0 0 Cytosol 0 0.438717362396214 0.999998807907104 0 hPsi_site_3764 iPseU_CNN:0.999998807907104;iRNA_PseU:0 3765 chr1 201178926 201178926 1 + G A rs6702960 201178926 - 201178906 201178946 41 AAATCCTTCCTATAACCTGCCTTATTCACTGACCCCATTTC AAATCCTTCCTATAACCTGCTTTATTCACTGACCCCATTTC Direct Gain 0 0.95661684774342 0 0.580781817436218 prediction 0.91323369548684 Functional Gain - IGFN1 ENSG00000163395 CDS Human protein_coding chr1:201178926 chr1:201178926 synonymous SNV . 0 21 hPsi_associated_SNPs_104805 0 0 0 0 0 exosome 0 0.438717876976994 0.161563634872436 0 hPsi_site_3765 iPseU_CNN:0.161563634872436;iRNA_PseU:0 3766 chr15 89811724 89811724 1 + G A HNSC 89811724 - 89811704 89811744 41 CACGAGTTCTCTGCCTAGTTCATAGTCCAATTTGATGGCAA CACGAGTTCTCTGCCTAGTTTATAGTCCAATTTGATGGCAA Direct Gain 0 0.956616515282325 0 0.999705195426941 prediction 0.91323303056465 Functional Gain - FANCI ENSG00000140525 CDS Human protein_coding chr15:89811724 chr15:89811724 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104806 0 0 0 0 0 Nucleus 0 0.438718699553636 0.999410390853882 0 hPsi_site_3766 iPseU_CNN:0.999410390853882;iRNA_PseU:0 3767 chr10 101120689 101120689 1 + C A LIHC 101120689 - 101120669 101120709 41 GCTAGCAGAAGCTGTGGTGAGATCTTCACCCGCATCTCCGT GCTAGCAGAAGCTGTGGTGATATCTTCACCCGCATCTCCGT Direct Gain 0 0.956611855356473 0 0.984145998954773 prediction 0.913223710712947 Functional Gain - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101120689 chr10:101120689 synonymous SNV . 0 21 hPsi_associated_SNPs_104807 0 0 0 0 0 cytosol 0 0.438708291270959 0.968291997909546 0 hPsi_site_3767 iPseU_CNN:0.968291997909546;iRNA_PseU:0 3768 chr1 154227736 154227736 1 + C T LUSC 154227736 + 154227716 154227756 41 GACGACAACCAATCAGCATTCATCCTCCTTGGGTGGCTTGA GACGACAACCAATCAGCATTTATCCTCCTTGGGTGGCTTGA Direct Gain 0 0.956610932822159 0 0.997523903846741 prediction 0.913221865644318 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154227736 chr1:154227736 nonsynonymous SNV 0.993 3 21 hPsi_associated_SNPs_104808 0 0 1 0 1 Nucleus 0 0.438718804315026 0.995047807693482 0 hPsi_site_3768 iPseU_CNN:0.995047807693482;iRNA_PseU:0 3769 chr12 109673431 109673431 1 + C T SKCM 109673431 + 109673411 109673451 41 AAAGAATTTCCCAAGTTTTTCACATTCAGAGCAAGAGATGA AAAGAATTTCCCAAGTTTTTTACATTCAGAGCAAGAGATGA Direct Gain 0 0.95660819302489 0 0.997495174407959 prediction 0.913216386049779 Functional Gain - ACACB ENSG00000076555 CDS Human protein_coding chr12:109673431 chr12:109673431 synonymous SNV . 0 21 hPsi_associated_SNPs_104809 0 0 0 0 2 Nucleus 0 0.43871924243002 0.994990348815918 0 hPsi_site_3769 iPseU_CNN:0.994990348815918;iRNA_PseU:0 3770 chr5 63905072 63905072 1 + C A LUAD 63905072 - 63905052 63905092 41 CAGGAGGAGCCACCTAGCTTGAGATGAGACAACACAGCCCA CAGGAGGAGCCACCTAGCTTTAGATGAGACAACACAGCCCA Direct Gain 0 0.956607947635763 0 0.999636292457581 prediction 0.913215895271525 Functional Gain - RGS7BP ENSG00000186479 CDS Human protein_coding chr5:63905072 chr5:63905072 stopgain 0.995 1 21 hPsi_associated_SNPs_104810 0 0 0 0 0 exosome 0 0.438703785236432 0.999272584915162 0 hPsi_site_3770 iPseU_CNN:0.999272584915162;iRNA_PseU:0 3771 chr10 121571402 121571402 1 + G A SKCM 121571402 - 121571382 121571422 41 TCATCAGGCAGTAGTAACTTCATGTAACTTTGTAAGAGCTG TCATCAGGCAGTAGTAACTTTATGTAACTTTGTAAGAGCTG Direct Gain 0 0.956602882365146 0 2.89082527160645e-05 prediction 0.913205764730292 Functional Gain - INPP5F ENSG00000198825 CDS Human protein_coding chr10:121571402 chr10:121571402 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104811 0 0 0 0 0 Cytosol 0 0.438718807681183 0 0 hPsi_site_3771 iPseU_CNN:0;iRNA_PseU:0 3772 chr5 34937497 34937497 1 + G A CESC 34937497 - 34937477 34937517 41 AGCCTGTCGTGTATCATATTCTTCCTTCCATGCAAAATTCT AGCCTGTCGTGTATCATATTTTTCCTTCCATGCAAAATTCT Direct Gain 0 0.956590586092488 0 0.162884533405304 prediction 0.913181172184976 Functional Gain - DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34937497 chr5:34937497 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_104812 0 0 0 0 0 Cytosol 0 0.438718592997728 0 0 hPsi_site_3772 iPseU_CNN:0;iRNA_PseU:0 3773 chr1 150280534 150280534 1 + G T BLCA 150280534 + 150280514 150280554 41 TTAAGCATCGGCGGTATTATGAGAAGCCATGCCGCCGGCGA TTAAGCATCGGCGGTATTATTAGAAGCCATGCCGCCGGCGA Direct Gain 0 0.956587169351707 0 0.363173931837082 prediction 0.913174338703414 Functional Gain - MRPS21 ENSG00000187145 CDS Human other chr1:150280534 chr1:150280534 stopgain 0.999 0 21 hPsi_associated_SNPs_104813 0 0 1 0 1 Cytosol 0 0.437428235978768 0 0 hPsi_site_3773 iPseU_CNN:0;iRNA_PseU:0 3774 chr19 49842673 49842673 1 + G A COAD 49842673 - 49842653 49842693 41 GGGTGGGGGCGGGGCCAGATCACCTCGAGTAGGCCGACGCC GGGTGGGGGCGGGGCCAGATTACCTCGAGTAGGCCGACGCC Direct Gain 0 0.956585640583766 0 0.999637007713318 prediction 0.913171281167532 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49842673 chr19:49842673 synonymous SNV . 0 21 hPsi_associated_SNPs_104814 0 0 1 0 0 Endoplasmic reticulum 0 0.438718592970598 0.999274015426636 0 hPsi_site_3774 iPseU_CNN:0.999274015426636;iRNA_PseU:0 3775 chr16 84203530 84203530 1 + C A OV 84203530 - 84203510 84203550 41 CCTTGTTTCTCTGTCCCCGGGAGGCTCCTCCTTGCCTTCCG CCTTGTTTCTCTGTCCCCGGTAGGCTCCTCCTTGCCTTCCG Direct Gain 0 0.956575633561669 0 0.99675464630127 prediction 0.913151267123337 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84203530 chr16:84203530 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_104815 0 0 0 0 0 Cytosol 0 0.438718593872044 0.99350929260254 0 hPsi_site_3775 iPseU_CNN:0.99350929260254;iRNA_PseU:0 3776 chr19 18054116 18054116 1 + G T SARC 18054116 + 18054096 18054136 41 GTGCCGCTGGAGGAGAACGTGAACCGCCGCGTGCTGGAGGA GTGCCGCTGGAGGAGAACGTTAACCGCCGCGTGCTGGAGGA Direct Gain 0 0.956573631537274 0 0.998490452766418 prediction 0.913147263074549 Functional Gain - CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18054116 chr19:18054116 synonymous SNV . 0 21 hPsi_associated_SNPs_104816 0 0 1 0 2 Ribosome 0 0.438804949381749 0.996980905532836 0 hPsi_site_3776 iPseU_CNN:0.996980905532836;iRNA_PseU:0 3777 chr19 55142527 55142527 1 + G A UCEC 55142527 - 55142507 55142547 41 AGGACCGTGAGGATGGGGGTCATGGCGTCTCCTCCCACTGC AGGACCGTGAGGATGGGGGTTATGGCGTCTCCTCCCACTGC Direct Gain 0 0.956571786456186 0 0.985982000827789 prediction 0.913143572912371 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55142527 chr19:55142527 nonsynonymous SNV 0.032 3 21 hPsi_associated_SNPs_104817 0 0 0 0 0 exosome 0 0.438717700323522 0.971964001655578 0 hPsi_site_3777 iPseU_CNN:0.971964001655578;iRNA_PseU:0 3778 chr5 132087813 132087813 1 + C T COAD 132087813 + 132087793 132087833 41 GGCTCCACACTGGCCTTGGTCATCATCACCTTAGAGCTGGA GGCTCCACACTGGCCTTGGTTATCATCACCTTAGAGCTGGA Direct Gain 0 0.956555125282989 0 0.11174139380455 prediction 0.913110250565978 Functional Gain - CCNI2;SEPT8 ENSG00000164402;ENSG00000205089 CDS Human other chr5:132087813 chr5:132087813 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_104818 0 0 0 0 1 unknown 0 0.439117902800823 0 0 hPsi_site_3778 iPseU_CNN:0;iRNA_PseU:0 3779 chrX 150869697 150869697 1 + G A rs145819281 150869697 - 150869677 150869717 41 TCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCA TCTTCCCGGGGGCTTCGACTTATGCGTGGTCCCTACCCCCA Direct Gain 0 0.956537913649726 0 0.991649508476257 prediction 0.913075827299451 Functional Gain - PRRG3 ENSG00000130032 UTR3 Human protein_coding chrX:150869697 chrX:150869697 . . 0 21 hPsi_associated_SNPs_104819 0 0 0 0 0 exosome 0 0.438723477305908 0.983299016952514 0 hPsi_site_3779 iPseU_CNN:0.983299016952514;iRNA_PseU:0 3780 chr10 5255003 5255003 1 + G A rs140450651 5255003 - 5254983 5255023 41 TTTGTGTTTCTTTGCTAAGGCACAAAGAACTGGGTCCTCCA TTTGTGTTTCTTTGCTAAGGTACAAAGAACTGGGTCCTCCA Direct Gain 0 0.956537646389709 0 0.545374810695648 prediction 0.913075292779417 Functional Gain - AKR1C4 ENSG00000198610 CDS Human protein_coding chr10:5255003 chr10:5255003 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_104820 0 0 0 0 0 exosome 0 0.438718598769683 0.0907496213912959 0 hPsi_site_3780 iPseU_CNN:0.0907496213912959;iRNA_PseU:0 3781 chr3 180630485 180630485 1 + G A OV 180630485 - 180630465 180630505 41 GAGCCGCGAACCTCCACCGTCAGCTCCGCCATGTTGGAACC GAGCCGCGAACCTCCACCGTTAGCTCCGCCATGTTGGAACC Direct Gain 0 0.956535667125156 0 0.999235153198242 prediction 0.913071334250312 Functional Gain - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180630485 chr3:180630485 synonymous SNV . 0 21 hPsi_associated_SNPs_104821 0 0 0 0 0 Exosome 0 0.438705451528812 0.998470306396484 0 hPsi_site_3781 iPseU_CNN:0.998470306396484;iRNA_PseU:0 3782 chr16 30748508 30748508 1 + A T TGCT 30748508 + 30748488 30748528 41 GAGGCACCCACCGGCGCAGTAAAAAGGCCAAAGCCCCTGAG GAGGCACCCACCGGCGCAGTTAAAAGGCCAAAGCCCCTGAG Direct Gain 0 0.956522540245409 0 0.994478225708008 prediction 0.913045080490818 Functional Gain - SRCAP ENSG00000080603 CDS Human protein_coding chr16:30748508 chr16:30748508 stopgain 0.987 1 21 hPsi_associated_SNPs_104822 0 0 1 0 0 Ribosome 0 0.438718592999535 0.988956451416016 0 hPsi_site_3782 iPseU_CNN:0.988956451416016;iRNA_PseU:0 3783 chr22 41755857 41755857 1 + G T rs9538 41755857 + 41755837 41755877 41 GCTCAGAGGACTGAATCTGGGACCTGTGTTCCCCCCGGCAG GCTCAGAGGACTGAATCTGGTACCTGTGTTCCCCCCGGCAG Direct Gain 0 0.95652122149178 0 0.998898804187775 prediction 0.913042442983559 Functional Gain - ZC3H7B ENSG00000100403 UTR3 Human protein_coding chr22:41755857 chr22:41755857 . . 0 21 hPsi_associated_SNPs_104823 0 0 1 0 0 Endoplasmic reticulum 0 0.438626113058563 0.99779760837555 0 hPsi_site_3783 iPseU_CNN:0.99779760837555;iRNA_PseU:0 3784 chr12 20522857 20522857 1 + C T BLCA 20522857 + 20522837 20522877 41 AGGCTGAGGCTGGGCGTCCTCATGATCGCCTTGACTAGCGC AGGCTGAGGCTGGGCGTCCTTATGATCGCCTTGACTAGCGC Direct Gain 0 0.956520022843708 0 0.867678761482239 prediction 0.913040045687415 Functional Gain - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20522857 chr12:20522857 synonymous SNV . 0 21 hPsi_associated_SNPs_104824 0 0 0 0 0 Nucleus 0 0.438732224004695 0.735357522964478 0 hPsi_site_3784 iPseU_CNN:0.735357522964478;iRNA_PseU:0 3785 chr16 75204325 75204325 1 + C T rs12930876 75204325 + 75204305 75204345 41 ATTGAGGGAACATGGGAATTCATACTGAGATGCAATCTCTC ATTGAGGGAACATGGGAATTTATACTGAGATGCAATCTCTC Direct Gain 0 0.956504857625959 0 0.964536190032959 prediction 0.913009715251918 Functional Gain - ZFP1 ENSG00000184517 UTR3 Human protein_coding chr16:75204325 chr16:75204325 . . 0 21 hPsi_associated_SNPs_104825 0 0 1 0 0 chromatin 0 0.438719109025125 0.929072380065918 0 hPsi_site_3785 iPseU_CNN:0.929072380065918;iRNA_PseU:0 3786 chr1 110563388 110563388 1 + G T COAD 110563388 + 110563368 110563408 41 GCTTGCATCTGCCATCATTTGATGCCCACCTTACAGAGCTG GCTTGCATCTGCCATCATTTTATGCCCACCTTACAGAGCTG Direct Gain 0 0.956491652788306 0 0.53381609916687 prediction 0.912983305576612 Functional Gain - AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110563388 chr1:110563388 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104826 0 0 1 0 2 Ribosome 0 0.438824972069768 0.06763219833374 0 hPsi_site_3786 iPseU_CNN:0.06763219833374;iRNA_PseU:0 3787 chr15 74921349 74921349 1 + G A BLCA 74921349 - 74921329 74921369 41 AGAGGTTTGCAGTTCTCCTTCACATACCGGCCGTCAGAGCT AGAGGTTTGCAGTTCTCCTTTACATACCGGCCGTCAGAGCT Direct Gain 0 0.956490312177428 0 0.999735713005066 prediction 0.912980624354855 Functional Gain - CLK3 ENSG00000179335 CDS Human protein_coding chr15:74921349 chr15:74921349 synonymous SNV . 0 21 hPsi_associated_SNPs_104827 0 0 0 0 0 Nucleus 0 0.438724130464365 0.999471426010132 0 hPsi_site_3787 iPseU_CNN:0.999471426010132;iRNA_PseU:0 3788 chr15 81440214 81440214 1 + C T SKCM 81440214 + 81440194 81440234 41 TTAAGGCAAATGCTAAAATTCTCATCAATCACTGTCACACA TTAAGGCAAATGCTAAAATTTTCATCAATCACTGTCACACA Direct Gain 0 0.956487168652549 0 0.93228816986084 prediction 0.912974337305098 Functional Gain - CFAP161 ENSG00000156206 CDS Human protein_coding chr15:81440214 chr15:81440214 nonsynonymous SNV 0.084 1 21 hPsi_associated_SNPs_104828 0 0 0 0 2 chromatin 0 0.438682725659603 0.86457633972168 0 hPsi_site_3788 iPseU_CNN:0.86457633972168;iRNA_PseU:0 3789 chr8 2037988 2037988 1 + C A rs36089594 2037988 - 2037968 2038008 41 CATCCTGGGCCTGAATGGGGGACGTTATCTCCGAAGGTTCG CATCCTGGGCCTGAATGGGGTACGTTATCTCCGAAGGTTCG Direct Gain 0 0.956486002893296 0 0.9990394115448 prediction 0.912972005786592 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2037988 chr8:2037988 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_104829 0 0 0 0 0 exosome 0 0.438714398566246 0.9980788230896 0 hPsi_site_3789 iPseU_CNN:0.9980788230896;iRNA_PseU:0 3790 chr16 68721569 68721569 1 + C T BLCA 68721569 + 68721549 68721589 41 GACAAGGACCTGTCTCCCCACACCTCCCCTTTCCAGGCCCA GACAAGGACCTGTCTCCCCATACCTCCCCTTTCCAGGCCCA Direct Gain 0 0.956485146704902 0 0.937376976013184 prediction 0.912970293409804 Functional Gain - CDH3 ENSG00000062038 CDS Human protein_coding chr16:68721569 chr16:68721569 synonymous SNV . 0 21 hPsi_associated_SNPs_104830 0 0 0 0 1 Endoplasmic reticulum 0 0.4387186092753 0.874753952026368 0 hPsi_site_3790 iPseU_CNN:0.874753952026368;iRNA_PseU:0 3791 chr3 14177549 14177549 1 + G A rs529568107 14177549 - 14177529 14177569 41 GGTCAAACACTTTGATGAGGCATACTCAACATTCCGCTATT GGTCAAACACTTTGATGAGGTATACTCAACATTCCGCTATT Direct Gain 0 0.956466804818083 0 0.998128890991211 prediction 0.912933609636166 Functional Gain - TMEM43 ENSG00000170876;ENSG00000268279 intronic Human other chr3:14177549 chr3:14177549 . . 0 21 hPsi_associated_SNPs_104831 0 0 0 0 0 Ribosome 0 0.438656859654463 0.996257781982422 0 hPsi_site_3791 iPseU_CNN:0.996257781982422;iRNA_PseU:0 3792 chr19 50529356 50529356 1 + G A rs58602067 50529356 - 50529336 50529376 41 GGGATTGTAGTCGGCCGCGTCAACAGACGCAACCCCAGCCT GGGATTGTAGTCGGCCGCGTTAACAGACGCAACCCCAGCCT Direct Gain 0 0.9564638631712 0 0.987901091575623 prediction 0.9129277263424 Functional Gain - ZNF473 ENSG00000142528 UTR5 Human protein_coding chr19:50529356 chr19:50529356 . . 0 21 hPsi_associated_SNPs_104832 0 0 0 0 0 Cytosol 0 0.438718601992868 0.975802183151246 0 hPsi_site_3792 iPseU_CNN:0.975802183151246;iRNA_PseU:0 3793 chr20 17417525 17417525 1 + C A LUSC 17417525 - 17417505 17417545 41 GGGGCCGGCCCCCTTACCTTGTTCACGCCATCGGCCATGGC GGGGCCGGCCCCCTTACCTTTTTCACGCCATCGGCCATGGC Direct Gain 0 0.956461470803396 0 0.999197959899902 prediction 0.912922941606793 Functional Gain - PCSK2 ENSG00000125851 CDS Human protein_coding chr20:17417525 chr20:17417525 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_104833 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592980936 0.998395919799804 0 hPsi_site_3793 iPseU_CNN:0.998395919799804;iRNA_PseU:0 3794 chr3 46449655 46449655 1 + G A BRCA 46449655 - 46449635 46449675 41 TGCCTGGGCGTCATACTTGTCACATTGCTCTGCCTCATCGC TGCCTGGGCGTCATACTTGTTACATTGCTCTGCCTCATCGC Direct Gain 0 0.956451892901557 0 0.999996781349182 prediction 0.912903785803114 Functional Gain - CCRL2 ENSG00000121797 CDS Human protein_coding chr3:46449655 chr3:46449655 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104834 0 0 0 0 0 exosome 0 0.438744208492801 0.999993562698364 0 hPsi_site_3794 iPseU_CNN:0.999993562698364;iRNA_PseU:0 3795 chr8 1649504 1649504 1 + C T UCEC 1649504 + 1649484 1649524 41 AGCGAGCGGCGTCCTTCCGGCAGAATTCCGCCTCCGAGCGC AGCGAGCGGCGTCCTTCCGGTAGAATTCCGCCTCCGAGCGC Direct Gain 0 0.956451118505658 0 0.99994957447052 prediction 0.912902237011316 Functional Gain - DLGAP2 ENSG00000198010 CDS Human protein_coding chr8:1649504 chr8:1649504 stopgain 0.881 1 21 hPsi_associated_SNPs_104835 0 0 0 0 0 nucleolus 0 0.438718592995102 0.99989914894104 0 hPsi_site_3795 iPseU_CNN:0.99989914894104;iRNA_PseU:0 3796 chr1 27059204 27059204 1 + C T BLCA 27059204 + 27059184 27059224 41 ATTTGGGTCTCAGGCATCCTCAGCCCCCTCAATGACCTCCA ATTTGGGTCTCAGGCATCCTTAGCCCCCTCAATGACCTCCA Direct Gain 0 0.956450538767156 0 0.977052628993988 prediction 0.912901077534312 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27059204 chr1:27059204 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104836 0 0 1 0 2 Nucleus 0 0.438718592995102 0.954105257987976 0 hPsi_site_3796 iPseU_CNN:0.954105257987976;iRNA_PseU:0 3797 chr1 206647703 206647703 1 + C A PAAD 206647703 - 206647683 206647723 41 AGGTAGCTGGTAGTGTTGAAGACCTTCACAGCAACCAGCTC AGGTAGCTGGTAGTGTTGAATACCTTCACAGCAACCAGCTC Direct Gain 0 0.956447681575921 0 0.999987006187439 prediction 0.912895363151842 Functional Gain - IKBKE ENSG00000143466 CDS Human other chr1:206647703 chr1:206647703 synonymous SNV . 0 21 hPsi_associated_SNPs_104837 0 0 0 0 0 Cytosol 0 0.43739581865099 0.999974012374878 0 hPsi_site_3797 iPseU_CNN:0.999974012374878;iRNA_PseU:0 3798 chr8 61757852 61757852 1 + G A LUSC 61757852 - 61757832 61757872 41 GGCTGTGTGCTCTGGGCTTTCACCTTCTTTCCCTTCCTTCC GGCTGTGTGCTCTGGGCTTTTACCTTCTTTCCCTTCCTTCC Direct Gain 0 0.956444406756431 0 0.741641998291016 prediction 0.912888813512863 Functional Gain - CHD7 ENSG00000171316 CDS Human protein_coding chr8:61757852 chr8:61757852 synonymous SNV . 0 21 hPsi_associated_SNPs_104838 0 0 0 0 0 Cytosol 0 0.438718592995127 0.483283996582032 0 hPsi_site_3798 iPseU_CNN:0.483283996582032;iRNA_PseU:0 3799 chr12 10217392 10217392 1 + C A STAD 10217392 - 10217372 10217412 41 GTCCGCTGTGTCCATCCTGAGACAACCCCACCCAGTAATCA GTCCGCTGTGTCCATCCTGATACAACCCCACCCAGTAATCA Direct Gain 0 0.956439336027666 0 0.975084781646729 prediction 0.912878672055332 Functional Gain - CLEC9A ENSG00000197992 CDS Human protein_coding chr12:10217392 chr12:10217392 nonsynonymous SNV 0.038 0 21 hPsi_associated_SNPs_104839 0 0 0 0 0 exosome 0 0.438713768672398 0.950169563293458 0 hPsi_site_3799 iPseU_CNN:0.950169563293458;iRNA_PseU:0 3800 chr14 23072581 23072581 1 + G A UCEC 23072581 - 23072561 23072601 41 ATGCTGGGGATCCCCATGGTCTCCCGCCATGTCTCTATCGA ATGCTGGGGATCCCCATGGTTTCCCGCCATGTCTCTATCGA Direct Gain 0 0.956437011510161 0 0.867352604866028 prediction 0.912874023020322 Functional Gain - ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23072581 chr14:23072581 synonymous SNV . 0 21 hPsi_associated_SNPs_104840 0 0 0 0 0 cytosol 0 0.440094465512319 0.734705209732056 0 hPsi_site_3800 iPseU_CNN:0.734705209732056;iRNA_PseU:0 3801 chrX 110762676 110762676 1 + G A rs187356565 110762676 - 110762656 110762696 41 CTTCCAGGGACCCTGTGCTTCTTACAACCACTGCGCATGAA CTTCCAGGGACCCTGTGCTTTTTACAACCACTGCGCATGAA Direct Gain 0 0.956433813875199 0 0.930534482002258 prediction 0.912867627750397 Functional Gain - LINC00890 ENSG00000260802 ncRNA_exonic Human protein_coding chrX:110762676 chrX:110762676 . . 0 21 hPsi_associated_SNPs_104841 0 0 0 0 0 exosome 0 0.438718452961848 0.861068964004516 0 hPsi_site_3801 iPseU_CNN:0.861068964004516;iRNA_PseU:0 3802 chr3 183470006 183470006 1 + C T GBM 183470006 + 183469986 183470026 41 TTCTTCACCAATAAAGCAGTCACATGAGCCAGTACCCGATA TTCTTCACCAATAAAGCAGTTACATGAGCCAGTACCCGATA Direct Gain 0 0.956427968789294 0 0.989260375499725 prediction 0.912855937578587 Functional Gain - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183470006 chr3:183470006 nonsynonymous SNV 0.922 0 21 hPsi_associated_SNPs_104842 0 0 0 0 1 Nucleus 0 0.438289930585272 0.97852075099945 0 hPsi_site_3802 iPseU_CNN:0.97852075099945;iRNA_PseU:0 3803 chr1 161494908 161494908 1 + G A rs10919226 161494908 - 161494888 161494928 41 GGTGGCCTGGCGCTGCGAGTCATTGAAATAGGCGGGCACGG GGTGGCCTGGCGCTGCGAGTTATTGAAATAGGCGGGCACGG Direct Gain 0 0.956426552148775 0 0.999999225139618 prediction 0.912853104297551 Functional Gain - HSPA6 ENSG00000173110 CDS Human protein_coding chr1:161494908 chr1:161494908 nonsynonymous SNV 0.271 1 21 hPsi_associated_SNPs_104843 0 0 0 0 0 exosome 0 0.438653732330607 0.999998450279236 0 hPsi_site_3803 iPseU_CNN:0.999998450279236;iRNA_PseU:0 3804 chr8 61777946 61777946 1 + G A BLCA 61777946 - 61777926 61777966 41 GCAGCTGACAGAGGGTTATTCAACAGCCCGCCCAAGCCAAA GCAGCTGACAGAGGGTTATTTAACAGCCCGCCCAAGCCAAA Direct Gain 0 0.956426509365407 0 0.989053964614868 prediction 0.912853018730814 Functional Gain - CHD7 ENSG00000171316 CDS Human protein_coding chr8:61777946 chr8:61777946 synonymous SNV . 0 21 hPsi_associated_SNPs_104844 0 0 0 0 0 Cytosol 0 0.438718592979563 0.978107929229736 0 hPsi_site_3804 iPseU_CNN:0.978107929229736;iRNA_PseU:0 3805 chr12 110778734 110778734 1 + G T LUSC 110778734 + 110778714 110778754 41 ACGCCCGCTGTTTTGCTCGAGTTGAACCCTCCCACAAGTCT ACGCCCGCTGTTTTGCTCGATTTGAACCCTCCCACAAGTCT Direct Gain 0 0.956414322862975 0 0.989480137825012 prediction 0.912828645725949 Functional Gain - ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110778734 chr12:110778734 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104845 0 0 1 0 1 Nucleus 0 0.438718593287353 0.978960275650024 0 hPsi_site_3805 iPseU_CNN:0.978960275650024;iRNA_PseU:0 3806 chr19 57868434 57868434 1 + C T SKCM 57868434 + 57868414 57868454 41 TGCAGTGAATGTGGAAAATTCTTTAGCCAAAGCTCCCACCT TGCAGTGAATGTGGAAAATTTTTTAGCCAAAGCTCCCACCT Direct Gain 0 0.956405661259268 0 0.856390476226807 prediction 0.912811322518535 Functional Gain - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57868434 chr19:57868434 synonymous SNV . 0 21 hPsi_associated_SNPs_104846 0 0 0 0 0 chromatin 0 0.438740196391845 0.712780952453614 0 hPsi_site_3806 iPseU_CNN:0.712780952453614;iRNA_PseU:0 3807 chr16 67686168 67686168 1 + G A BLCA 67686168 - 67686148 67686188 41 AGGCTCAAGGAGGCTGGGCTCACCTCCATCCGGTGCTGGTA AGGCTCAAGGAGGCTGGGCTTACCTCCATCCGGTGCTGGTA Direct Gain 0 0.956404126795894 0 0.992937564849854 prediction 0.912808253591787 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67686168 chr16:67686168 nonsynonymous SNV 0.076 0 21 hPsi_associated_SNPs_104847 0 0 0 0 0 chromatin 0 0.438718592995065 0.985875129699708 0 hPsi_site_3807 iPseU_CNN:0.985875129699708;iRNA_PseU:0 3808 chr3 156763475 156763475 1 + C A UCEC 156763475 - 156763455 156763495 41 GTCTAGTCTCATTTGCTGAAGATGCTCCACCCCTGGGAGGA GTCTAGTCTCATTTGCTGAATATGCTCCACCCCTGGGAGGA Direct Gain 0 0.956398192732291 0 0.499755024909973 prediction 0.912796385464583 Functional Gain - LEKR1 ENSG00000197980 CDS Human protein_coding chr3:156763475 chr3:156763475 nonsynonymous SNV 0.036 0 21 hPsi_associated_SNPs_104848 0 0 0 0 0 chromatin 0 0.438709187930945 0 0 hPsi_site_3808 iPseU_CNN:0;iRNA_PseU:0 3809 chr19 12969513 12969513 1 + G A BLCA 12969513 - 12969493 12969533 41 ATGCAGAGGTGGCGCCGAGTCTCAAAGGAGCAGAACATGCC ATGCAGAGGTGGCGCCGAGTTTCAAAGGAGCAGAACATGCC Direct Gain 0 0.956395667370591 0 0.980155110359192 prediction 0.912791334741181 Functional Gain - MAST1 ENSG00000105613 CDS Human protein_coding chr19:12969513 chr19:12969513 synonymous SNV . 0 21 hPsi_associated_SNPs_104849 0 0 0 0 0 Endoplasmic reticulum 0 0.438682737073619 0.960310220718384 0 hPsi_site_3809 iPseU_CNN:0.960310220718384;iRNA_PseU:0 3810 chr10 96292988 96292988 1 + T A rs12260063 96292988 - 96292968 96293008 41 TTACTTCAGCCATAAAATGTAAAATCAGCAGTTTTCCACCT TTACTTCAGCCATAAAATGTTAAATCAGCAGTTTTCCACCT Direct Gain 0 0.956391135266798 0 0.444881856441498 prediction 0.912782270533596 Functional Gain - TBC1D12 ENSG00000108239 UTR3 Human protein_coding chr10:96292988 chr10:96292988 . . 0 21 hPsi_associated_SNPs_104850 0 0 0 0 0 chromatin 0 0.436046713063112 0 0 hPsi_site_3810 iPseU_CNN:0;iRNA_PseU:0 3811 chr19 15052452 15052452 1 + C T SKCM 15052452 + 15052432 15052472 41 CATCATCCTGACCATCAGTTCAGACTCCCACCTCCACACCC CATCATCCTGACCATCAGTTTAGACTCCCACCTCCACACCC Direct Gain 0 0.956388744445695 0 0.561457335948944 prediction 0.912777488891391 Functional Gain - OR7C2 ENSG00000127529 CDS Human protein_coding chr19:15052452 chr19:15052452 nonsynonymous SNV 0.047 1 21 hPsi_associated_SNPs_104851 0 0 0 0 0 exosome 0 0.438710703758424 0.122914671897888 0 hPsi_site_3811 iPseU_CNN:0.122914671897888;iRNA_PseU:0 3812 chr10 111895214 111895214 1 + G A rs563019644 111895214 - 111895194 111895234 41 AGGACACAGAGGTTCATTGGCTCATTCTTTATGCCAAAGCA AGGACACAGAGGTTCATTGGTTCATTCTTTATGCCAAAGCA Direct Gain 0 0.956385969790214 0 0.990448594093323 prediction 0.912771939580427 Functional Gain - ADD3 ENSG00000148700 UTR3 Human protein_coding chr10:111895214 chr10:111895214 . . 0 21 hPsi_associated_SNPs_104852 0 0 0 0 0 Ribosome 0 0.438718590182636 0.980897188186646 0 hPsi_site_3812 iPseU_CNN:0.980897188186646;iRNA_PseU:0 3813 chr5 161530983 161530983 1 + C T UCEC 161530983 + 161530963 161531003 41 TCCTGGAGGCTTTATCAATTCTCATTTGTTGGTCTAAGAAA TCCTGGAGGCTTTATCAATTTTCATTTGTTGGTCTAAGAAA Direct Gain 0 0.956380946453835 0 0.000145673751831055 prediction 0.91276189290767 Functional Gain - GABRG2 ENSG00000113327 CDS Human protein_coding chr5:161530983 chr5:161530983 synonymous SNV . 0 21 hPsi_associated_SNPs_104853 0 0 0 0 2 exosome 0 0.43872507881322 0 0 hPsi_site_3813 iPseU_CNN:0;iRNA_PseU:0 3814 chr21 46048059 46048059 1 + C A rs587609949 46048059 - 46048039 46048079 41 GCTGGGGCTGCTCCTTCTGTGTTGAGCTGTGCTGAGGCTGG GCTGGGGCTGCTCCTTCTGTTTTGAGCTGTGCTGAGGCTGG Direct Gain 0 0.956367593552021 0 0.995956182479858 prediction 0.912735187104043 Functional Gain - KRTAP10-9 ENSG00000221837 UTR3 Human protein_coding chr21:46048059 chr21:46048059 . . 0 21 hPsi_associated_SNPs_104854 0 0 0 0 0 unknown 0 0.438723803866599 0.991912364959716 0 hPsi_site_3814 iPseU_CNN:0.991912364959716;iRNA_PseU:0 3815 chr10 73494069 73494069 1 + G A BLCA 73494069 - 73494049 73494089 41 GTCCACCTTGGGGCCGCCGTCATCTGCCACCACTGTCAAGG GTCCACCTTGGGGCCGCCGTTATCTGCCACCACTGTCAAGG Direct Gain 0 0.956361449263014 0 0.917110443115234 prediction 0.912722898526029 Functional Gain - CDH23 ENSG00000107736 CDS Human protein_coding chr10:73494069 chr10:73494069 nonsynonymous SNV 0.948 3 21 hPsi_associated_SNPs_104855 0 0 0 0 0 exosome 0 0.438732090054367 0.834220886230468 0 hPsi_site_3815 iPseU_CNN:0.834220886230468;iRNA_PseU:0 3816 chr4 77651964 77651964 1 + G A BLCA 77651964 - 77651944 77651984 41 GTGAGGTCGGCCTGCAGGCTCACTGCGCCTGGGGAGACACA GTGAGGTCGGCCTGCAGGCTTACTGCGCCTGGGGAGACACA Direct Gain 0 0.956353020239031 0 0.898200273513794 prediction 0.912706040478062 Functional Gain - SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77651964 chr4:77651964 nonsynonymous SNV 0.976 2 21 hPsi_associated_SNPs_104856 0 0 0 0 0 Ribosome 0 0.43776426246479 0.796400547027588 0 hPsi_site_3816 iPseU_CNN:0.796400547027588;iRNA_PseU:0 3817 chrY 3447740 3447740 1 + C A STAD 3447740 - 3447720 3447760 41 AGGGGCAGGCTTTGTACATTGTCTGGACCACTGGCCCTGAC AGGGGCAGGCTTTGTACATTTTCTGGACCACTGGCCCTGAC Direct Gain 0 0.956350658759174 0 0.999965310096741 prediction 0.912701317518348 Functional Gain - TGIF2LY ENSG00000176679 CDS Human protein_coding chrY:3447740 chrY:3447740 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_104857 0 0 0 0 0 unknown 0 0.438716249640588 0.999930620193482 0 hPsi_site_3817 iPseU_CNN:0.999930620193482;iRNA_PseU:0 3818 chr2 149241367 149241367 1 + C A rs181919984 149241367 - 149241347 149241387 41 ACAGCTGGGAGGAACAGGGGGTTAAAAGTAGTGTCACTGCC ACAGCTGGGAGGAACAGGGGTTTAAAAGTAGTGTCACTGCC Direct Gain 0 0.956320412789118 0 0.987252295017242 prediction 0.912640825578237 Functional Gain - MBD5 ENSG00000204406 CDS Human protein_coding chr2:149241367 chr2:149241367 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104858 0 0 0 0 0 chromatin 0 0.438718592995102 0.974504590034484 0 hPsi_site_3818 iPseU_CNN:0.974504590034484;iRNA_PseU:0 3819 chr1 207648173 207648173 1 + T A rs61735651 207648173 - 207648153 207648193 41 ACTGGTGGAGGGTGACAGTGAATAACTGCAGAAGAGATTTA ACTGGTGGAGGGTGACAGTGTATAACTGCAGAAGAGATTTA Direct Gain 0 0.956312742377236 0 0.169935047626495 prediction 0.912625484754472 Functional Gain - CR2 ENSG00000117322 CDS Human protein_coding chr1:207648173 chr1:207648173 synonymous SNV . 0 21 hPsi_associated_SNPs_104859 0 0 0 0 0 Endoplasmic reticulum 0 0.438718203936652 0 0 hPsi_site_3819 iPseU_CNN:0;iRNA_PseU:0 3820 chr19 50985417 50985417 1 + C T SKCM 50985417 + 50985397 50985437 41 CGGCTGCAGTGGATGTACATCATTCCCGTCGTCCTGTTCCT CGGCTGCAGTGGATGTACATTATTCCCGTCGTCCTGTTCCT Direct Gain 0 0.956304750209705 0 0.784913778305054 prediction 0.912609500419409 Functional Gain - EMC10 ENSG00000161671 CDS Human protein_coding chr19:50985417 chr19:50985417 synonymous SNV . 0 21 hPsi_associated_SNPs_104860 0 0 1 0 1 Cytosol 0 0.418177497757958 0.569827556610108 0 hPsi_site_3820 iPseU_CNN:0.569827556610108;iRNA_PseU:0 3821 chr5 140208831 140208831 1 + G A SKCM 140208831 - 140208811 140208851 41 TGAGGCGTCAGCGAGCAGTTCACCTGCCCGTTGGCACCTGA TGAGGCGTCAGCGAGCAGTTTACCTGCCCGTTGGCACCTGA Direct Gain 0 0.956296928389039 0 0.999984979629517 prediction 0.912593856778078 Functional Gain - PCDHA6 ENSG00000081842 CDS Human protein_coding chr5:140208831 chr5:140208831 synonymous SNV . 0 21 hPsi_associated_SNPs_104861 0 0 0 0 0 nucleus 0 0.438714305955259 0.999969959259034 0 hPsi_site_3821 iPseU_CNN:0.999969959259034;iRNA_PseU:0 3822 chr20 61477349 61477349 1 + G T UCEC 61477349 + 61477329 61477369 41 AAAGCTCCTGGCTTCGTGGAGACACAGCCATTTGTGATTTG AAAGCTCCTGGCTTCGTGGATACACAGCCATTTGTGATTTG Direct Gain 0 0.956287373208182 0 0.912096500396729 prediction 0.912574746416363 Functional Gain - DPH3P1 ENSG00000101190 CDS Human protein_coding chr20:61477349 chr20:61477349 nonsynonymous SNV 0.011 1 21 hPsi_associated_SNPs_104862 0 0 0 0 0 unknown 0 0.438721729916857 0.824193000793458 0 hPsi_site_3822 iPseU_CNN:0.824193000793458;iRNA_PseU:0 3823 chr8 11184278 11184278 1 + G A rs182586339 11184278 - 11184258 11184298 41 ACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGA ACCGTGTTAGCCAGGATGGTTTCGATCTCCTGACCTCATGA Direct Gain 0 0.956281511892761 0 0.981501460075378 prediction 0.912563023785522 Functional Gain - MTMR9 ENSG00000104643 UTR3 Human protein_coding chr8:11184278 chr8:11184278 . . 0 21 hPsi_associated_SNPs_104863 0 0 0 0 0 Ribosome 0 0.439178594402845 0.963002920150756 0 hPsi_site_3823 iPseU_CNN:0.963002920150756;iRNA_PseU:0 3824 chr11 49831901 49831901 1 + C T UCEC 49831901 + 49831881 49831921 41 AAATAGGTTCTGTTTTATGTCTTGAATTGCATTCTAATGTT AAATAGGTTCTGTTTTATGTTTTGAATTGCATTCTAATGTT Direct Gain 0 0.956280687343483 0 0.00671231746673584 prediction 0.912561374686965 Functional Gain - LOC440040 ENSG00000205035 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:49831901 chr11:49831901 . . 0 21 hPsi_associated_SNPs_104864 0 0 0 1 0 unknown 0 0.438988021334141 0 0 hPsi_site_3824 iPseU_CNN:0;iRNA_PseU:0 3825 chr2 14776786 14776786 1 + G A rs116546729 14776786 - 14776766 14776806 41 AGCTAAACAGCATTATTTGACAAATTCCCTTGAAAGAGACA AGCTAAACAGCATTATTTGATAAATTCCCTTGAAAGAGACA Direct Gain 0 0.956274445913798 0 0.991470456123352 prediction 0.912548891827596 Functional Gain - FAM84A ENSG00000162981 UTR3 Human protein_coding chr2:14776786 chr2:14776786 . . 0 21 hPsi_associated_SNPs_104865 0 0 0 0 0 Ribosome 0 0.438718600795623 0.982940912246704 0 hPsi_site_3825 iPseU_CNN:0.982940912246704;iRNA_PseU:0 3826 chr5 150227742 150227742 1 + C A UCEC 150227742 - 150227722 150227762 41 AGAGTCTCCTTGATGTTAGAGATCACCTCTGGCAAGTTCCC AGAGTCTCCTTGATGTTAGATATCACCTCTGGCAAGTTCCC Direct Gain 0 0.956255236446279 0 0.363268166780472 prediction 0.912510472892557 Functional Gain - IRGM ENSG00000237693 CDS Human protein_coding chr5:150227742 chr5:150227742 synonymous SNV . 0 21 hPsi_associated_SNPs_104866 0 0 0 0 0 exosome 0 0.438736506613034 0 0 hPsi_site_3826 iPseU_CNN:0;iRNA_PseU:0 3827 chr15 25345152 25345152 1 + C T rs113968283 25345152 + 25345132 25345172 41 GTGCAGTGGCATAATCTCGGCTCACTGCAACCTCCACCTCC GTGCAGTGGCATAATCTCGGTTCACTGCAACCTCCACCTCC Direct Gain 0 0.956239158829736 0 0.999729871749878 prediction 0.912478317659473 Functional Gain - SNHG14 ENSG00000224078 ncRNA_intronic Human processed_transcript chr15:25345152 chr15:25345152 . . 0 21 hPsi_associated_SNPs_104867 0 0 0 0 0 unknown 0 0.439160527277876 0.999459743499756 0 hPsi_site_3827 iPseU_CNN:0.999459743499756;iRNA_PseU:0 3828 chrX 68060218 68060218 1 + C T LUAD 68060218 + 68060198 68060238 41 TGCGTCATCTTCCTGCTCATCATCATCTTCCTGACGGTCCT TGCGTCATCTTCCTGCTCATTATCATCTTCCTGACGGTCCT Direct Gain 0 0.956234404306705 0 0.999990999698639 prediction 0.912468808613409 Functional Gain - EFNB1 ENSG00000090776 CDS Human protein_coding chrX:68060218 chrX:68060218 synonymous SNV . 0 21 hPsi_associated_SNPs_104868 0 0 1 0 0 Endoplasmic reticulum 0 0.438726287014167 0.999981999397278 0 hPsi_site_3828 iPseU_CNN:0.999981999397278;iRNA_PseU:0 3829 chr10 50828573 50828573 1 + C A LAML 50828573 - 50828553 50828593 41 GGCAGGGCCAGGCGGTTGTTGAGATACATGTCATTCAGCCA GGCAGGGCCAGGCGGTTGTTTAGATACATGTCATTCAGCCA Direct Gain 0 0.956234382653022 0 0.999966681003571 prediction 0.912468765306043 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50828573 chr10:50828573 synonymous SNV . 0 21 hPsi_associated_SNPs_104869 0 0 0 0 0 unknown 0 0.4398869741021 0.999933362007142 0 hPsi_site_3829 iPseU_CNN:0.999933362007142;iRNA_PseU:0 3830 chr19 42848946 42848946 1 + C T SKCM 42848946 + 42848926 42848966 41 CTGCCTGGCCTGCACTTGCTCACCTTTCAGCAGCCGCCCAA CTGCCTGGCCTGCACTTGCTTACCTTTCAGCAGCCGCCCAA Direct Gain 0 0.956232395753283 0 0.882377624511719 prediction 0.912464791506566 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42848946 chr19:42848946 synonymous SNV . 0 21 hPsi_associated_SNPs_104870 0 0 1 0 1 Endoplasmic reticulum 0 0.438718637301979 0.764755249023438 0 hPsi_site_3830 iPseU_CNN:0.764755249023438;iRNA_PseU:0 3831 chr19 57302439 57302439 1 + C T rs182753984 57302439 + 57302419 57302459 41 CTAGGGAACTCTCTTTCCTTCTCACTGAACTCTAGCTTCAT CTAGGGAACTCTCTTTCCTTTTCACTGAACTCTAGCTTCAT Direct Gain 0 0.956229436807993 0 0.998833298683167 prediction 0.912458873615986 Functional Gain - ZIM2-AS1 ENSG00000269793 ncRNA_exonic Human antisense chr19:57302439 chr19:57302439 . . 0 21 hPsi_associated_SNPs_104871 0 0 0 0 1 unknown 0 0.437807321230736 0.997666597366334 0 hPsi_site_3831 iPseU_CNN:0.997666597366334;iRNA_PseU:0 3832 chr12 133272599 133272599 1 + C T ESCA 133272599 + 133272579 133272619 41 GTCTTTGCACCGGCCTTCCTCATGTTGTTCTTCCTCATCAT GTCTTTGCACCGGCCTTCCTTATGTTGTTCTTCCTCATCAT Direct Gain 0 0.956217911609152 0 0.989307165145874 prediction 0.912435823218305 Functional Gain - PXMP2 ENSG00000176894 CDS Human protein_coding chr12:133272599 chr12:133272599 synonymous SNV . 0 21 hPsi_associated_SNPs_104872 0 0 1 0 1 Ribosome 0 0.438592153448376 0.978614330291748 0 hPsi_site_3832 iPseU_CNN:0.978614330291748;iRNA_PseU:0 3833 chr11 55033131 55033131 1 + G T COAD 55033131 + 55033111 55033151 41 AAAAGCTTGTGAAAATCAGAGAAACCTGAATGTGGAAACCA AAAAGCTTGTGAAAATCAGATAAACCTGAATGTGGAAACCA Direct Gain 0 0.956214622299535 0 0.849815905094147 prediction 0.912429244599069 Functional Gain - TRIM48 ENSG00000150244 CDS Human protein_coding chr11:55033131 chr11:55033131 nonsynonymous SNV 0.070 0 21 hPsi_associated_SNPs_104873 0 0 0 0 2 unknown 0 0.438744717358053 0.699631810188294 0 hPsi_site_3833 iPseU_CNN:0.699631810188294;iRNA_PseU:0 3834 chr7 143701707 143701707 1 + C A LUAD 143701707 - 143701687 143701727 41 ATAAAGAGTGGGAATAGGAAGATGACCAGTGCCAGGATAAA ATAAAGAGTGGGAATAGGAATATGACCAGTGCCAGGATAAA Direct Gain 0 0.956198076039834 0 0.996284604072571 prediction 0.912396152079669 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701707 chr7:143701707 synonymous SNV . 0 21 hPsi_associated_SNPs_104874 0 0 0 0 0 unknown 0 0.438718592995066 0.992569208145142 0 hPsi_site_3834 iPseU_CNN:0.992569208145142;iRNA_PseU:0 3835 chr11 118376178 118376178 1 + G T LUSC 118376178 + 118376158 118376198 41 CTTCAGGCCTGCTTATTGGGGTTCAGCCTCCTCCGGATCCC CTTCAGGCCTGCTTATTGGGTTTCAGCCTCCTCCGGATCCC Direct Gain 0 0.956189362043736 0 0.99999988079071 prediction 0.912378724087472 Functional Gain - KMT2A ENSG00000118058 CDS Human protein_coding chr11:118376178 chr11:118376178 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_104875 0 0 1 0 0 Cytosol 0 0.438718603295589 0.99999976158142 0 hPsi_site_3835 iPseU_CNN:0.99999976158142;iRNA_PseU:0 3836 chr17 6661423 6661423 1 + C T STAD 6661423 + 6661403 6661443 41 TGTAGTAAAAGACATGTAGTCTCTGCCAACTTCACCCTCCA TGTAGTAAAAGACATGTAGTTTCTGCCAACTTCACCCTCCA Direct Gain 0 0.956189163790486 0 0.929400861263275 prediction 0.912378327580972 Functional Gain - XAF1 ENSG00000132530 CDS Human protein_coding chr17:6661423 chr17:6661423 synonymous SNV . 0 21 hPsi_associated_SNPs_104876 0 0 0 0 1 exosome 0 0.438718596165311 0.85880172252655 0 hPsi_site_3836 iPseU_CNN:0.85880172252655;iRNA_PseU:0 3837 chr14 21793201 21793201 1 + G T LUSC 21793201 + 21793181 21793221 41 AGGGTGCTAGAGACTGTGGAGAAAGTCCATGGCTTGGCCAC AGGGTGCTAGAGACTGTGGATAAAGTCCATGGCTTGGCCAC Direct Gain 0 0.956186260433799 0 0.995690703392029 prediction 0.912372520867599 Functional Gain - RPGRIP1 ENSG00000092200 CDS Human protein_coding chr14:21793201 chr14:21793201 nonsynonymous SNV 0.983 3 21 hPsi_associated_SNPs_104877 0 0 0 0 0 chromatin 0 0.438740434228905 0.991381406784058 0 hPsi_site_3837 iPseU_CNN:0.991381406784058;iRNA_PseU:0 3838 chr7 134650072 134650072 1 + G T COAD 134650072 + 134650052 134650092 41 ATCAGGACTTGAGACCAGGAGACGTATCCAGCAAGCGGAAC ATCAGGACTTGAGACCAGGATACGTATCCAGCAAGCGGAAC Direct Gain 0 0.956185427713299 0 0.999986886978149 prediction 0.912370855426597 Functional Gain - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134650072 chr7:134650072 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_104878 0 0 1 0 2 Ribosome 0 0.438709148698867 0.999973773956298 0 hPsi_site_3838 iPseU_CNN:0.999973773956298;iRNA_PseU:0 3839 chr22 39772115 39772115 1 + C T LUSC 39772115 + 39772095 39772135 41 CTGGCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCC CTGGCCAACCAGTGGCAGGTTTCCAAGCCCAAGGACAACCC Direct Gain 0 0.956180184017082 0 0.999998509883881 prediction 0.912360368034164 Functional Gain - SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39772115 chr22:39772115 synonymous SNV . 0 21 hPsi_associated_SNPs_104879 0 0 1 0 2 Endoplasmic reticulum 0 0.438718413192209 0.999997019767762 0 hPsi_site_3839 iPseU_CNN:0.999997019767762;iRNA_PseU:0 3840 chr19 3612010 3612010 1 + A T LUAD 3612010 + 3611990 3612030 41 GAAGCCGTGGCGGTGCGAGTATTCCCACTCGCGGTTGACGA GAAGCCGTGGCGGTGCGAGTTTTCCCACTCGCGGTTGACGA Direct Gain 0 0.956179112848993 0 0.99999463558197 prediction 0.912358225697986 Functional Gain - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612010 chr19:3612010 nonsynonymous SNV 0.714 4 21 hPsi_associated_SNPs_104880 0 0 0 0 0 Ribosome 0 0.438792613553182 0.99998927116394 0 hPsi_site_3840 iPseU_CNN:0.99998927116394;iRNA_PseU:0 3841 chr1 18021672 18021672 1 + C A SKCM 18021672 - 18021652 18021692 41 TGGCAGATCAGGAGGCTGGTGACACACAAGTGCTTCTGGCC TGGCAGATCAGGAGGCTGGTTACACACAAGTGCTTCTGGCC Direct Gain 0 0.956168977661119 0 0.99999737739563 prediction 0.912337955322239 Functional Gain - ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:18021672 chr1:18021672 synonymous SNV . 0 21 hPsi_associated_SNPs_104881 0 0 0 0 0 Nucleus 0 0.439049346354864 0.99999475479126 0 hPsi_site_3841 iPseU_CNN:0.99999475479126;iRNA_PseU:0 3842 chr19 7527130 7527130 1 + G T LUAD 7527130 + 7527110 7527150 41 CCGAGATGGGCGGCCTCGAAGACCTGCCCCAGCCCCGAGGC CCGAGATGGGCGGCCTCGAATACCTGCCCCAGCCCCGAGGC Direct Gain 0 0.956166962454254 0 0.976427555084229 prediction 0.912333924908509 Functional Gain - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7527130 chr19:7527130 nonsynonymous SNV 0.015 1 21 hPsi_associated_SNPs_104882 0 0 0 0 1 Cytosol 0 0.43871594641022 0.952855110168458 0 hPsi_site_3842 iPseU_CNN:0.952855110168458;iRNA_PseU:0 3843 chr2 189864274 189864274 1 + C A COAD 189864274 - 189864254 189864294 41 CTTTGGACCAGGACTTCCAAGACCTCCTCTTTCTCCAGGCA CTTTGGACCAGGACTTCCAATACCTCCTCTTTCTCCAGGCA Direct Gain 0 0.956166554083031 0 0.857533156871796 prediction 0.912333108166062 Functional Gain - COL3A1 ENSG00000168542 CDS Human protein_coding chr2:189864274 chr2:189864274 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_104883 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859287847 0.715066313743592 0 hPsi_site_3843 iPseU_CNN:0.715066313743592;iRNA_PseU:0 3844 chr1 7723459 7723459 1 + C T LIHC 7723459 + 7723439 7723479 41 TGTAACAGCGCCAAACACCGCATCATCTCGCCCAAGGTGGA TGTAACAGCGCCAAACACCGTATCATCTCGCCCAAGGTGGA Direct Gain 0 0.956161154970767 0 0.0145545601844788 prediction 0.912322309941535 Functional Gain - CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7723459 chr1:7723459 synonymous SNV . 0 21 hPsi_associated_SNPs_104884 0 0 0 0 1 Cytosol 0 0.438746398333571 0 0 hPsi_site_3844 iPseU_CNN:0;iRNA_PseU:0 3845 chr11 63141442 63141442 1 + G A UCEC 63141442 - 63141422 63141462 41 AAAGCCAGGCCTGCCAGGGTCATAAATGCAATACCAGAAGG AAAGCCAGGCCTGCCAGGGTTATAAATGCAATACCAGAAGG Direct Gain 0 0.956154318545358 0 0.977021336555481 prediction 0.912308637090716 Functional Gain - SLC22A9 ENSG00000149742 CDS Human protein_coding chr11:63141442 chr11:63141442 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_104885 0 0 0 0 0 nucleus 0 0.438832502687248 0.954042673110962 0 hPsi_site_3845 iPseU_CNN:0.954042673110962;iRNA_PseU:0 3846 chr5 56152511 56152511 1 + G A BLCA 56152511 - 56152491 56152531 41 GCTGGCATACAGGTTGCCTTCAGTTTCTCCCTGATCATTCG GCTGGCATACAGGTTGCCTTTAGTTTCTCCCTGATCATTCG Direct Gain 0 0.956147259977196 0 0.999964714050293 prediction 0.912294519954393 Functional Gain - MAP3K1 ENSG00000095015 CDS Human protein_coding chr5:56152511 chr5:56152511 synonymous SNV . 0 21 hPsi_associated_SNPs_104886 0 0 0 0 0 Cytosol 0 0.438756535934764 0.999929428100586 0 hPsi_site_3846 iPseU_CNN:0.999929428100586;iRNA_PseU:0 3847 chr1 10042714 10042714 1 + C T SKCM 10042714 + 10042694 10042734 41 GAAGACAGGAATGCTGGGGTCATCCTGGCCCCTTTGCAGAG GAAGACAGGAATGCTGGGGTTATCCTGGCCCCTTTGCAGAG Direct Gain 0 0.956144150550166 0 0.999268770217896 prediction 0.912288301100332 Functional Gain - NMNAT1 ENSG00000173614 CDS Human protein_coding chr1:10042714 chr1:10042714 synonymous SNV . 0 21 hPsi_associated_SNPs_104887 0 0 0 0 0 Nucleus 0 0.438718593142983 0.998537540435792 0 hPsi_site_3847 iPseU_CNN:0.998537540435792;iRNA_PseU:0 3848 chrX 129493065 129493065 1 + G A UCEC 129493065 - 129493045 129493085 41 CAAAGTGCTGGGATTACAGGCATGAGCCACAGCACACAGCC CAAAGTGCTGGGATTACAGGTATGAGCCACAGCACACAGCC Direct Gain 0 0.956134974561988 0 0.999952793121338 prediction 0.912269949123977 Functional Gain - SLC25A14 ENSG00000102078 CDS Human protein_coding chrX:129493065 chrX:129493065 nonsynonymous SNV 0.087 0 21 hPsi_associated_SNPs_104888 0 0 0 0 0 Endoplasmic reticulum 0 0.43860709226051 0.999905586242676 0 hPsi_site_3848 iPseU_CNN:0.999905586242676;iRNA_PseU:0 3849 chr8 28574347 28574347 1 + G A UCEC 28574347 - 28574327 28574367 41 GGCAGGGAATACAACTGCTTCTCCAGCTCAGCAGGCCGCAG GGCAGGGAATACAACTGCTTTTCCAGCTCAGCAGGCCGCAG Direct Gain 0 0.956133925397295 0 0.478523701429367 prediction 0.912267850794589 Functional Gain - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574347 chr8:28574347 synonymous SNV . 0 21 hPsi_associated_SNPs_104889 0 0 0 0 0 Endoplasmic reticulum 0 0.439660438975383 0 0 hPsi_site_3849 iPseU_CNN:0;iRNA_PseU:0 3850 chr1 178888164 178888164 1 + T A rs113885762 178888164 - 178888144 178888184 41 ACATGCCAATCATTATGCTTATCATAAACAGGCTTAAATTG ACATGCCAATCATTATGCTTTTCATAAACAGGCTTAAATTG Direct Gain 0 0.956130905786811 0 0.00153335928916931 prediction 0.912261811573622 Functional Gain - RALGPS2 ENSG00000116191 UTR3 Human protein_coding chr1:178888164 chr1:178888164 . . 0 21 hPsi_associated_SNPs_104890 0 0 0 0 0 Ribosome 0 0.439166185148234 0 0 hPsi_site_3850 iPseU_CNN:0;iRNA_PseU:0 3851 chr3 9425964 9425964 1 + C T rs532812713 9425964 + 9425944 9425984 41 GGAGATGAGCCGTGTCTGCACACCTACCACAGGCCGAGCTG GGAGATGAGCCGTGTCTGCATACCTACCACAGGCCGAGCTG Direct Gain 0 0.956125656476453 0 0.999998569488525 prediction 0.912251312952906 Functional Gain - THUMPD3 ENSG00000134077 CDS Human protein_coding chr3:9425964 chr3:9425964 nonsynonymous SNV 0.753 2 21 hPsi_associated_SNPs_104891 0 0 1 0 2 Cytosol 0 0.439275642090005 0.99999713897705 0 hPsi_site_3851 iPseU_CNN:0.99999713897705;iRNA_PseU:0 3852 chr11 59856269 59856269 1 + C T BLCA 59856269 + 59856249 59856289 41 AAAGTAATAGGAGAGCAAATCTTGCTCTCCCACAGGAGCCT AAAGTAATAGGAGAGCAAATTTTGCTCTCCCACAGGAGCCT Direct Gain 0 0.956123258972165 0 0.632476210594177 prediction 0.91224651794433 Functional Gain - MS4A2 ENSG00000149534 CDS Human protein_coding chr11:59856269 chr11:59856269 nonsynonymous SNV 0.161 1 21 hPsi_associated_SNPs_104892 0 0 0 0 1 exosome 0 0.438716787590382 0.264952421188354 0 hPsi_site_3852 iPseU_CNN:0.264952421188354;iRNA_PseU:0 3853 chr7 33423334 33423334 1 + C T COAD 33423334 + 33423314 33423354 41 TTTGGCTCATAACCAATGAGCTTATTCTTCGCCTTCAAGAA TTTGGCTCATAACCAATGAGTTTATTCTTCGCCTTCAAGAA Direct Gain 0 0.956116761253373 0 0.973983764648438 prediction 0.912233522506746 Functional Gain - BBS9 ENSG00000122507 CDS Human protein_coding chr7:33423334 chr7:33423334 nonsynonymous SNV 0.964 1 21 hPsi_associated_SNPs_104893 0 0 0 0 1 cytosol 0 0.438718532961156 0.947967529296876 0 hPsi_site_3853 iPseU_CNN:0.947967529296876;iRNA_PseU:0 3854 chr3 133465289 133465289 1 + G A UCEC 133465289 - 133465269 133465309 41 GCAGGGCTCCCACGGCGAGCCTCATCTTCCGGGTGCGGCGC GCAGGGCTCCCACGGCGAGCTTCATCTTCCGGGTGCGGCGC Direct Gain 0 0.956115152716517 0 0.956113934516907 prediction 0.912230305433034 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133465289 chr3:133465289 nonsynonymous SNV 0.950 0 21 hPsi_associated_SNPs_104894 0 0 0 0 0 Cytosol 0 0.438728228973766 0.912227869033814 0 hPsi_site_3854 iPseU_CNN:0.912227869033814;iRNA_PseU:0 3855 chr8 145065252 145065252 1 + C T rs545923337 145065252 + 145065232 145065272 41 CCACAGCCCGGGGCAAAGGTCACGGTCTTCCCTTGCTTCCC CCACAGCCCGGGGCAAAGGTTACGGTCTTCCCTTGCTTCCC Direct Gain 0 0.956111422731583 0 0.999999761581421 prediction 0.912222845463166 Functional Gain - GRINA ENSG00000178685 UTR5 Human protein_coding chr8:145065252 chr8:145065252 . . 0 21 hPsi_associated_SNPs_104895 0 0 0 0 0 Endoplasmic reticulum 0 0.438718900480179 0.999999523162842 0 hPsi_site_3855 iPseU_CNN:0.999999523162842;iRNA_PseU:0 3856 chr1 205033516 205033516 1 + T A STAD 205033516 - 205033496 205033536 41 GGGGCTGGCAGGGGATAAGGATCTCTCCCCCGCGGGCCGCG GGGGCTGGCAGGGGATAAGGTTCTCTCCCCCGCGGGCCGCG Direct Gain 0 0.956109182545034 0 0.999972581863403 prediction 0.912218365090068 Functional Gain - CNTN2 ENSG00000184144 CDS Human protein_coding chr1:205033516 chr1:205033516 nonsynonymous SNV 0.510 1 21 hPsi_associated_SNPs_104896 0 0 0 0 0 exosome 0 0.438775631341083 0.999945163726806 0 hPsi_site_3856 iPseU_CNN:0.999945163726806;iRNA_PseU:0 3857 chr11 71931976 71931976 1 + C T UCEC 71931976 + 71931956 71931996 41 AGCCAGGAGCTGCACAAGGACACCTCCCGCCTGTACAACTT AGCCAGGAGCTGCACAAGGATACCTCCCGCCTGTACAACTT Direct Gain 0 0.956107033039022 0 0.999997138977051 prediction 0.912214066078045 Functional Gain - FOLR2 ENSG00000165457 CDS Human protein_coding chr11:71931976 chr11:71931976 synonymous SNV . 0 21 hPsi_associated_SNPs_104897 0 0 0 0 1 Cytosol 0 0.438718593026879 0.999994277954102 0 hPsi_site_3857 iPseU_CNN:0.999994277954102;iRNA_PseU:0 3858 chr15 84657469 84657469 1 + T A LUSC 84657469 - 84657449 84657489 41 TTGTAGGATTCTGTATCTGTATCTTCCCAGTTCCATCCAAA TTGTAGGATTCTGTATCTGTTTCTTCCCAGTTCCATCCAAA Direct Gain 0 0.956100803327 0 0.99937641620636 prediction 0.912201606653999 Functional Gain - ADAMTSL3 ENSG00000156218 CDS Human protein_coding chr15:84657469 chr15:84657469 nonsynonymous SNV 0.988 1 21 hPsi_associated_SNPs_104898 0 0 0 0 0 cytosol 0 0.438597472049871 0.99875283241272 0 hPsi_site_3858 iPseU_CNN:0.99875283241272;iRNA_PseU:0 3859 chr16 67237459 67237459 1 + C T UCEC 67237459 + 67237439 67237479 41 GGGGAGGAGGAAGCGTACCTCAACTTCATTGCCCCCTCCAA GGGGAGGAGGAAGCGTACCTTAACTTCATTGCCCCCTCCAA Direct Gain 0 0.956099589711825 0 0.999996304512024 prediction 0.912199179423649 Functional Gain - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67237459 chr16:67237459 synonymous SNV . 0 21 hPsi_associated_SNPs_104899 0 0 1 0 2 Cytosol 0 0.438718592995255 0.999992609024048 0 hPsi_site_3859 iPseU_CNN:0.999992609024048;iRNA_PseU:0 3860 chr2 71191904 71191904 1 + G A rs368854893 71191904 - 71191884 71191924 41 TCCTCCCCAACTACTGCCTTCATGGCCTGCACGTCCTTCCC TCCTCCCCAACTACTGCCTTTATGGCCTGCACGTCCTTCCC Direct Gain 0 0.956096787522786 0 0.987400829792023 prediction 0.912193575045571 Functional Gain - ATP6V1B1 ENSG00000116039 CDS Human protein_coding chr2:71191904 chr2:71191904 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_104900 1 0 0 0 0 Endoplasmic reticulum 0 0.438719062274346 0.974801659584046 0 hPsi_site_3860 iPseU_CNN:0.974801659584046;iRNA_PseU:0 3861 chr11 114569315 114569315 1 + C A UCEC 114569315 - 114569295 114569335 41 GTCAGGCCACATTCAGTGAAGACATTGGAGCTTCTGTTGGC GTCAGGCCACATTCAGTGAATACATTGGAGCTTCTGTTGGC Direct Gain 0 0.956088719113752 0 0.999519467353821 prediction 0.912177438227505 Functional Gain - NXPE2 ENSG00000204361 CDS Human protein_coding chr11:114569315 chr11:114569315 synonymous SNV . 0 21 hPsi_associated_SNPs_104901 0 0 0 0 0 exosome 0 0.438723682286177 0.999038934707642 0 hPsi_site_3861 iPseU_CNN:0.999038934707642;iRNA_PseU:0 3862 chr11 55032749 55032749 1 + C T BLCA 55032749 + 55032729 55032769 41 GCTCTCAGGAGCACCGGTATCACAGACACTGTCCCGCTGAG GCTCTCAGGAGCACCGGTATTACAGACACTGTCCCGCTGAG Direct Gain 0 0.956061552220516 0 0.984112560749054 prediction 0.912123104441032 Functional Gain - TRIM48 ENSG00000150244 CDS Human protein_coding chr11:55032749 chr11:55032749 nonsynonymous SNV 0.076 4 21 hPsi_associated_SNPs_104902 0 0 0 0 1 unknown 0 0.437909658742643 0.968225121498108 0 hPsi_site_3862 iPseU_CNN:0.968225121498108;iRNA_PseU:0 3863 chr4 3156082 3156082 1 + G A LUAD 3156082 - 3156062 3156102 41 GCTTGTTCTCCTGGTTCTTTCTCCTTCCCCTTTCGTCGGAT GCTTGTTCTCCTGGTTCTTTTTCCTTCCCCTTTCGTCGGAT Direct Gain 0 0.956053588876416 0 0.432458013296127 prediction 0.912107177752832 Functional Gain - HTT ENSG00000197386 CDS Human protein_coding chr4:3156082 chr4:3156082 synonymous SNV . 0 21 hPsi_associated_SNPs_104903 0 0 0 0 0 Cytosol 0 0.438718593109943 0 0 hPsi_site_3863 iPseU_CNN:0;iRNA_PseU:0 3864 chr5 145379690 145379690 1 + G T UCEC 145379690 + 145379670 145379710 41 ACCTAAGGTTTAATAAGGGAGATATCATCCTTCTCCGGAGA ACCTAAGGTTTAATAAGGGATATATCATCCTTCTCCGGAGA Direct Gain 0 0.956051820899124 0 0.86114913225174 prediction 0.912103641798248 Functional Gain - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145379690 chr5:145379690 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_104904 0 0 0 0 1 exosome 0 0.438602728039227 0.72229826450348 0 hPsi_site_3864 iPseU_CNN:0.72229826450348;iRNA_PseU:0 3865 chr12 101018624 101018624 1 + G A OV 101018624 - 101018604 101018644 41 AGTCATGACAAAATAATGGTCATCATCTTCCTTTTTCTTTG AGTCATGACAAAATAATGGTTATCATCTTCCTTTTTCTTTG Direct Gain 0 0.95604782106682 0 0.997090220451355 prediction 0.912095642133639 Functional Gain - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101018624 chr12:101018624 nonsynonymous SNV 0.953 4 21 hPsi_associated_SNPs_104905 0 0 0 0 0 Cytosol 0 0.437864847423331 0.99418044090271 0 hPsi_site_3865 iPseU_CNN:0.99418044090271;iRNA_PseU:0 3866 chr21 36089881 36089881 1 + C A rs146515216 36089881 - 36089861 36089901 41 GTGATGAGAGGTTGGTTAGGGATGGTGGAGGCAAAGCCACA GTGATGAGAGGTTGGTTAGGTATGGTGGAGGCAAAGCCACA Direct Gain 0 0.956037475285891 0 0.995342552661896 prediction 0.912074950571782 Functional Gain - CLIC6 ENSG00000159212 UTR3 Human protein_coding chr21:36089881 chr21:36089881 . . 0 21 hPsi_associated_SNPs_104906 0 0 0 0 0 exosome 0 0.438718541348152 0.990685105323792 0 hPsi_site_3866 iPseU_CNN:0.990685105323792;iRNA_PseU:0 3867 chr1 205538365 205538365 1 + C T BLCA 205538365 + 205538345 205538385 41 CTGCCCCAGATCTCCTGGGTCTTCTTCTCGCAGCAGCTCTG CTGCCCCAGATCTCCTGGGTTTTCTTCTCGCAGCAGCTCTG Direct Gain 0 0.956029338629942 0 0.982306003570557 prediction 0.912058677259884 Functional Gain - MFSD4A ENSG00000174514 CDS Human protein_coding chr1:205538365 chr1:205538365 synonymous SNV . 0 21 hPsi_associated_SNPs_104907 0 0 0 0 1 Nucleus 0 0.438724081234245 0.964612007141114 0 hPsi_site_3867 iPseU_CNN:0.964612007141114;iRNA_PseU:0 3868 chrX 24741351 24741351 1 + C A rs11573338 24741351 - 24741331 24741371 41 AGGAAGTAAAGCGTTCGCTCGATATTTTTCACCATGACACA AGGAAGTAAAGCGTTCGCTCTATATTTTTCACCATGACACA Direct Gain 0 0.956025887958448 0 0.921612739562988 prediction 0.912051775916896 Functional Gain - POLA1 ENSG00000101868 CDS Human protein_coding chrX:24741351 chrX:24741351 synonymous SNV . 0 21 hPsi_associated_SNPs_104908 0 0 0 0 0 chromatin 0 0.438699417752407 0.843225479125976 0 hPsi_site_3868 iPseU_CNN:0.843225479125976;iRNA_PseU:0 3869 chr7 95115286 95115286 1 + G A PAAD 95115286 - 95115266 95115306 41 ACAGGGGCAGTGGTGCCGTCCATCCTTCCTCTCCCTCTGGA ACAGGGGCAGTGGTGCCGTCTATCCTTCCTCTCCCTCTGGA Direct Gain 0 0.956025421548414 0 0.995381951332092 prediction 0.912050843096828 Functional Gain - ASB4 ENSG00000005981 CDS Human protein_coding chr7:95115286 chr7:95115286 nonsynonymous SNV 0.979 1 21 hPsi_associated_SNPs_104909 0 0 0 0 0 cytosol 0 0.438721095231181 0.990763902664184 0 hPsi_site_3869 iPseU_CNN:0.990763902664184;iRNA_PseU:0 3870 chr3 42730389 42730389 1 + G A LUAD 42730389 - 42730369 42730409 41 CCACTCAAACTTCTTGGGGTCATAGACGCACATCTTGTTCA CCACTCAAACTTCTTGGGGTTATAGACGCACATCTTGTTCA Direct Gain 0 0.956025404806695 0 0.999983787536621 prediction 0.912050809613391 Functional Gain - KLHL40 ENSG00000157119 CDS Human protein_coding chr3:42730389 chr3:42730389 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_104910 0 0 0 0 0 unknown 0 0.438720837620075 0.999967575073242 0 hPsi_site_3870 iPseU_CNN:0.999967575073242;iRNA_PseU:0 3871 chr8 22475940 22475940 1 + G A SKCM 22475940 - 22475920 22475960 41 GTCTCGCCGGTGCAAGTAGCCACACCAGTTGGCATCAAAGA GTCTCGCCGGTGCAAGTAGCTACACCAGTTGGCATCAAAGA Direct Gain 0 0.956022540303629 0 0.979921817779541 prediction 0.912045080607258 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22475940 chr8:22475940 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104911 0 0 0 0 0 Nucleus 0 0.384100757060498 0.959843635559082 0 hPsi_site_3871 iPseU_CNN:0.959843635559082;iRNA_PseU:0 3872 chr9 139702577 139702577 1 + G A rs377030067 139702577 - 139702557 139702597 41 CGGGGAAGGGGTGCGACTGGCACCATGTCCCGGCGGCCCCG CGGGGAAGGGGTGCGACTGGTACCATGTCCCGGCGGCCCCG Direct Gain 0 0.956021276607323 0 0.958414673805237 prediction 0.912042553214647 Functional Gain - CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702577 chr9:139702577 . . 0 21 hPsi_associated_SNPs_104912 0 0 0 0 0 unknown 0 0.434844769710037 0.916829347610474 0 hPsi_site_3872 iPseU_CNN:0.916829347610474;iRNA_PseU:0 3873 chr1 39800366 39800366 1 + G T THCA 39800366 + 39800346 39800386 41 ACTGCTACTGGAAAAAGACTGACATTGGCATCAGCTTTGGA ACTGCTACTGGAAAAAGACTTACATTGGCATCAGCTTTGGA Direct Gain 0 0.956021044531378 0 0.998639822006226 prediction 0.912042089062757 Functional Gain - MACF1 ENSG00000127603 CDS Human protein_coding chr1:39800366 chr1:39800366 synonymous SNV . 0 21 hPsi_associated_SNPs_104913 0 0 0 0 0 Endoplasmic reticulum 0 0.440935215620498 0.997279644012452 0 hPsi_site_3873 iPseU_CNN:0.997279644012452;iRNA_PseU:0 3874 chr4 126241103 126241103 1 + C T ACC 126241103 + 126241083 126241123 41 GCTGTGTTTAGCTTTACAGTCATAGCAACAGATCAGGGGAT GCTGTGTTTAGCTTTACAGTTATAGCAACAGATCAGGGGAT Direct Gain 0 0.956015427872021 0 0.996985912322998 prediction 0.912030855744042 Functional Gain - FAT4 ENSG00000196159 CDS Human protein_coding chr4:126241103 chr4:126241103 synonymous SNV . 0 21 hPsi_associated_SNPs_104914 0 0 0 0 0 Endoplasmic reticulum 0 0.438718606993085 0.993971824645996 0 hPsi_site_3874 iPseU_CNN:0.993971824645996;iRNA_PseU:0 3875 chr1 151043174 151043174 1 + C A rs587624267 151043174 - 151043154 151043194 41 GGAATCTGTGAAGGGAAAATGATCAGAAAACTCATGCTCCC GGAATCTGTGAAGGGAAAATTATCAGAAAACTCATGCTCCC Direct Gain 0 0.956014088720986 0 0.963442146778107 prediction 0.912028177441972 Functional Gain - GABPB2 ENSG00000143458 UTR5 Human protein_coding chr1:151043174 chr1:151043174 . . 0 21 hPsi_associated_SNPs_104915 0 0 0 0 0 chromatin 0 0.43840568499585 0.926884293556214 0 hPsi_site_3875 iPseU_CNN:0.926884293556214;iRNA_PseU:0 3876 chr14 72205854 72205854 1 + C T rs144388709 72205854 + 72205834 72205874 41 AAGAAGTTCACAGAATGGGTCTTCAACACCATAGACATGAG AAGAAGTTCACAGAATGGGTTTTCAACACCATAGACATGAG Direct Gain 0 0.956007412066933 0 0.822796285152435 prediction 0.912014824133866 Functional Gain - SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72205854 chr14:72205854 synonymous SNV . 0 21 hPsi_associated_SNPs_104916 0 0 1 0 0 Nucleus 0 0.437327842120342 0.64559257030487 0 hPsi_site_3876 iPseU_CNN:0.64559257030487;iRNA_PseU:0 3877 chr12 21205068 21205068 1 + C T SKCM 21205068 + 21205048 21205088 41 TCATGTAGATGTACCACTTTCTTATTGCAACTCAGAGTGCA TCATGTAGATGTACCACTTTTTTATTGCAACTCAGAGTGCA Direct Gain 0 0.956002144585704 0 0.358780592679977 prediction 0.912004289171409 Functional Gain - SLCO1B7 ENSG00000205754;ENSG00000257046 CDS Human other chr12:21205068 chr12:21205068 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_104917 0 0 0 0 1 nucleus 0 0.437087397206417 0 0 hPsi_site_3877 iPseU_CNN:0;iRNA_PseU:0 3878 chr11 47256931 47256931 1 + C T LUSC 47256931 + 47256911 47256951 41 TGGGCCTGATCCCGCACCCTCACCGTCACTTCCAGCACCTC TGGGCCTGATCCCGCACCCTTACCGTCACTTCCAGCACCTC Direct Gain 0 0.955998677728195 0 0.0130380392074585 prediction 0.911997355456391 Functional Gain - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256931 chr11:47256931 nonsynonymous SNV 0.940 4 21 hPsi_associated_SNPs_104918 0 0 1 0 1 Cytosol 0 0.456537984592612 0 0 hPsi_site_3878 iPseU_CNN:0;iRNA_PseU:0 3879 chr8 30614366 30614366 1 + G T UCEC 30614366 + 30614346 30614386 41 ACTTGCCTAAACCTTTAACTGAATTTCCGTCTCCTGCTGAA ACTTGCCTAAACCTTTAACTTAATTTCCGTCTCCTGCTGAA Direct Gain 0 0.955991541025661 0 0.979233682155609 prediction 0.911983082051323 Functional Gain - UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614366 chr8:30614366 . 0.001 0 21 hPsi_associated_SNPs_104919 0 0 1 1 1 Endoplasmic reticulum 0 0.438681126219677 0.958467364311218 0 hPsi_site_3879 iPseU_CNN:0.958467364311218;iRNA_PseU:0 3880 chr2 74129532 74129532 1 + G A CESC 74129532 - 74129512 74129552 41 CCCTCGCTTGCTCTGAGCCTCATCCCCCACATAGCTGTCTT CCCTCGCTTGCTCTGAGCCTTATCCCCCACATAGCTGTCTT Direct Gain 0 0.95598559334901 0 0.9976567029953 prediction 0.911971186698019 Functional Gain - ACTG2 ENSG00000163017 CDS Human protein_coding chr2:74129532 chr2:74129532 nonsynonymous SNV 0.948 3 21 hPsi_associated_SNPs_104920 0 0 0 0 0 Cytosol 0 0.438719465762581 0.9953134059906 0 hPsi_site_3880 iPseU_CNN:0.9953134059906;iRNA_PseU:0 3881 chr13 58299183 58299183 1 + C A STAD 58299183 - 58299163 58299203 41 TGGTTGCTTACTAGGTGACAGATATTGACTGTCAGTGGGCA TGGTTGCTTACTAGGTGACATATATTGACTGTCAGTGGGCA Direct Gain 0 0.955977973515594 0 0.0869144797325134 prediction 0.911955947031188 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58299183 chr13:58299183 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_104921 0 0 0 0 0 exosome 0 0.440601584772289 0 0 hPsi_site_3881 iPseU_CNN:0;iRNA_PseU:0 3882 chr6 41067227 41067227 1 + C T rs554322456 41067227 + 41067207 41067247 41 GTTTGAAATGCTTCAGTTGTCATTTTGTCATTGCATTTCAA GTTTGAAATGCTTCAGTTGTTATTTTGTCATTGCATTTCAA Direct Gain 0 0.955968438320567 0 0.972744345664978 prediction 0.911936876641134 Functional Gain - NFYA ENSG00000001167 UTR3 Human protein_coding chr6:41067227 chr6:41067227 . . 0 21 hPsi_associated_SNPs_104922 0 0 1 1 0 Cytosol 0 0.438757222460174 0.945488691329956 0 hPsi_site_3882 iPseU_CNN:0.945488691329956;iRNA_PseU:0 3883 chr3 135975417 135975417 1 + C T LUAD 135975417 + 135975397 135975437 41 TTTCCTGGAGACAGCGTGGTCACTGGACGAGGCCGAATCAA TTTCCTGGAGACAGCGTGGTTACTGGACGAGGCCGAATCAA Direct Gain 0 0.955962089433602 0 0.999989449977875 prediction 0.911924178867204 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:135975417 chr3:135975417 synonymous SNV . 0 21 hPsi_associated_SNPs_104923 0 0 1 0 2 Ribosome 0 0.438720203577405 0.99997889995575 0 hPsi_site_3883 iPseU_CNN:0.99997889995575;iRNA_PseU:0 3884 chr19 48760271 48760271 1 + G A rs192102780 48760271 - 48760251 48760291 41 AGACCTTATTTGAATTTTGTCAATATTTCTCTTAACGTCCT AGACCTTATTTGAATTTTGTTAATATTTCTCTTAACGTCCT Direct Gain 0 0.955960808674318 0 0.948532581329346 prediction 0.911921617348636 Functional Gain - CARD8-AS1 ENSG00000268001 ncRNA_exonic Human antisense chr19:48760271 chr19:48760271 . . 0 21 hPsi_associated_SNPs_104924 0 0 0 0 0 unknown 0 0.438777302081599 0.897065162658692 0 hPsi_site_3884 iPseU_CNN:0.897065162658692;iRNA_PseU:0 3885 chr3 50391055 50391055 1 + C T BLCA 50391055 + 50391035 50391075 41 GGCATGTGCTCACTCTGGTTCACTGCCTCTGTCACTGGTGC GGCATGTGCTCACTCTGGTTTACTGCCTCTGTCACTGGTGC Direct Gain 0 0.955958611869746 0 0.326548963785172 prediction 0.911917223739492 Functional Gain - CYB561D2 ENSG00000114395 CDS Human protein_coding chr3:50391055 chr3:50391055 synonymous SNV . 0 21 hPsi_associated_SNPs_104925 0 0 1 0 0 Ribosome 0 0.43871942414679 0 0 hPsi_site_3885 iPseU_CNN:0;iRNA_PseU:0 3886 chr1 226019631 226019631 1 + G T COAD 226019631 + 226019611 226019651 41 GCAGGTGGAGATTCTCAACAGATACCCTCACTTCAAGACTA GCAGGTGGAGATTCTCAACATATACCCTCACTTCAAGACTA Direct Gain 0 0.955953707029921 0 0.992598652839661 prediction 0.911907414059842 Functional Gain - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226019631 chr1:226019631 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_104926 0 0 1 0 1 Endoplasmic reticulum 0 0.439288968880652 0.985197305679322 0 hPsi_site_3886 iPseU_CNN:0.985197305679322;iRNA_PseU:0 3887 chr10 63850661 63850661 1 + G A rs41274054 63850661 - 63850641 63850681 41 GCTCAGGGATGCTTTTCTGGCTTATTAAAGTCTCTTGTTCT GCTCAGGGATGCTTTTCTGGTTTATTAAAGTCTCTTGTTCT Direct Gain 0 0.955944245671883 0 0.199932396411896 prediction 0.911888491343766 Functional Gain - ARID5B ENSG00000150347 CDS Human protein_coding chr10:63850661 chr10:63850661 nonsynonymous SNV 0.815 0 21 hPsi_associated_SNPs_104927 0 0 0 0 0 Cytosol 0 0.438718592995284 0 0 hPsi_site_3887 iPseU_CNN:0;iRNA_PseU:0 3888 chr1 209849101 209849101 1 + G A CESC 209849101 - 209849081 209849121 41 CTGCCCAGCACGTACAGCTTCACCATCTTCCCCTTGCGCTT CTGCCCAGCACGTACAGCTTTACCATCTTCCCCTTGCGCTT Direct Gain 0 0.955927090870335 0 0.23631563782692 prediction 0.91185418174067 Functional Gain - G0S2 ENSG00000123689 CDS Human protein_coding chr1:209849101 chr1:209849101 synonymous SNV . 0 21 hPsi_associated_SNPs_104928 0 0 0 0 0 exosome 0 0.43871859527946 0 0 hPsi_site_3888 iPseU_CNN:0;iRNA_PseU:0 3889 chrX 153037720 153037720 1 + C A OV 153037720 - 153037700 153037740 41 GGTAGGTGAAGTGCTGGCTTGAGATGCCTGGTGGCTGGCTC GGTAGGTGAAGTGCTGGCTTTAGATGCCTGGTGGCTGGCTC Direct Gain 0 0.955917103456124 0 0.357241481542587 prediction 0.911834206912247 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153037720 chrX:153037720 stopgain 0.915 0 21 hPsi_associated_SNPs_104929 0 0 0 0 0 Endoplasmic reticulum 0 0.438719130146097 0 0 hPsi_site_3889 iPseU_CNN:0;iRNA_PseU:0 3890 chr2 73717916 73717916 1 + G T LGG 73717916 + 73717896 73717936 41 ATGTAGATCATCAAATGAGAGAAAACCATTCTCCCCTTCCT ATGTAGATCATCAAATGAGATAAAACCATTCTCCCCTTCCT Direct Gain 0 0.955914603366108 0 0.785234332084656 prediction 0.911829206732216 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73717916 chr2:73717916 stopgain 0.186 0 21 hPsi_associated_SNPs_104930 0 0 1 0 0 Nucleus 0 0.437939596255177 0.570468664169312 0 hPsi_site_3890 iPseU_CNN:0.570468664169312;iRNA_PseU:0 3891 chr14 67147830 67147830 1 + G T DLBC 67147830 + 67147810 67147850 41 CCCATTTCTATTTAGTGAGTGATAGTTGCTTCAGGAATCTT CCCATTTCTATTTAGTGAGTTATAGTTGCTTCAGGAATCTT Direct Gain 0 0.955914079816632 0 0.989224791526794 prediction 0.911828159633265 Functional Gain - GPHN ENSG00000171723 CDS Human protein_coding chr14:67147830 chr14:67147830 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104931 0 0 0 0 2 chromatin 0 0.438796707397292 0.978449583053588 0 hPsi_site_3891 iPseU_CNN:0.978449583053588;iRNA_PseU:0 3892 chr7 150554705 150554705 1 + C T SKCM 150554705 + 150554685 150554725 41 GGGGCCTGGGCAGCGTCACTCATGAGTTAGCCCCCGGCATC GGGGCCTGGGCAGCGTCACTTATGAGTTAGCCCCCGGCATC Direct Gain 0 0.955906312034963 0 0.406140863895416 prediction 0.911812624069926 Functional Gain - AOC1 ENSG00000002726 CDS Human protein_coding chr7:150554705 chr7:150554705 nonsynonymous SNV 0.709 0 21 hPsi_associated_SNPs_104932 0 0 0 0 0 exosome 0 0.438719932366533 0 0 hPsi_site_3892 iPseU_CNN:0;iRNA_PseU:0 3893 chr14 102901338 102901338 1 + C T SKCM 102901338 + 102901318 102901358 41 GGAGGACAGCTGACTCCGGTCTCTGCCTTGGCAGCCAGCAC GGAGGACAGCTGACTCCGGTTTCTGCCTTGGCAGCCAGCAC Direct Gain 0 0.955896052325051 0 0.927011966705322 prediction 0.911792104650101 Functional Gain - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102901338 chr14:102901338 synonymous SNV . 0 21 hPsi_associated_SNPs_104933 0 0 1 0 0 Cytosol 0 0.438608300736573 0.854023933410644 0 hPsi_site_3893 iPseU_CNN:0.854023933410644;iRNA_PseU:0 3894 chr19 8841744 8841744 1 + G A UCEC 8841744 - 8841724 8841764 41 GCAACATAACGGTCATAAGACATGAGGACCAACAGGACGCC GCAACATAACGGTCATAAGATATGAGGACCAACAGGACGCC Direct Gain 0 0.955895794125079 0 0.959473133087158 prediction 0.911791588250157 Functional Gain - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8841744 chr19:8841744 nonsynonymous SNV 0.409 4 21 hPsi_associated_SNPs_104934 0 0 0 0 0 unknown 0 0.438724201266949 0.918946266174316 0 hPsi_site_3894 iPseU_CNN:0.918946266174316;iRNA_PseU:0 3895 chr11 111381485 111381485 1 + G A rs550378301 111381485 - 111381465 111381505 41 TAAAACTCATATGTAAAAGTCATGAAGATGCATTGCCTACT TAAAACTCATATGTAAAAGTTATGAAGATGCATTGCCTACT Direct Gain 0 0.955892423263084 0 0.999955058097839 prediction 0.911784846526169 Functional Gain - BTG4 ENSG00000137707 intronic Human protein_coding chr11:111381485 chr11:111381485 . . 0 21 hPsi_associated_SNPs_104935 0 0 0 0 0 unknown 0 0.438745399374311 0.999910116195678 0 hPsi_site_3895 iPseU_CNN:0.999910116195678;iRNA_PseU:0 3896 chr5 138266174 138266174 1 + C T BLCA 138266174 + 138266154 138266194 41 GATCACAGGCGATCATGGCTCAGCTTCCCCAGGAGCAAAAA GATCACAGGCGATCATGGCTTAGCTTCCCCAGGAGCAAAAA Direct Gain 0 0.955889026412226 0 0.998043537139893 prediction 0.911778052824451 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138266174 chr5:138266174 stopgain 1.000 1 21 hPsi_associated_SNPs_104936 0 0 1 0 1 Nucleus 0 0.438718592994673 0.996087074279786 0 hPsi_site_3896 iPseU_CNN:0.996087074279786;iRNA_PseU:0 3897 chrX 68725707 68725707 1 + C T SKCM 68725707 + 68725687 68725727 41 AAAGGCCACTTTCGGAACTTCACTCTCTCCTTTTGCGACAC AAAGGCCACTTTCGGAACTTTACTCTCTCCTTTTGCGACAC Direct Gain 0 0.95588679176341 0 0.888067185878754 prediction 0.91177358352682 Functional Gain - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68725707 chrX:68725707 synonymous SNV . 0 21 hPsi_associated_SNPs_104937 0 0 0 0 0 exosome 0 0.438706428614968 0.776134371757508 0 hPsi_site_3897 iPseU_CNN:0.776134371757508;iRNA_PseU:0 3898 chr9 15591485 15591485 1 + G A LUSC 15591485 - 15591465 15591505 41 TCTCGATTGCAATTTTGGATCATATTGTCTCTTTCCTCCAA TCTCGATTGCAATTTTGGATTATATTGTCTCTTTCCTCCAA Direct Gain 0 0.955883226355888 0 0.800763070583344 prediction 0.911766452711777 Functional Gain - CCDC171 ENSG00000164989 CDS Human protein_coding chr9:15591485 chr9:15591485 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_104938 0 0 0 0 0 Nucleus 0 0.438718678417401 0.601526141166688 0 hPsi_site_3898 iPseU_CNN:0.601526141166688;iRNA_PseU:0 3899 chr1 212209034 212209034 1 + G A rs17018373 212209034 - 212209014 212209054 41 CGAGCGACGTCCGGGCGCCTCAGAGTCATTTCCCCCTTCGG CGAGCGACGTCCGGGCGCCTTAGAGTCATTTCCCCCTTCGG Direct Gain 0 0.955880311978337 0 0.976135551929474 prediction 0.911760623956673 Functional Gain - DTL ENSG00000143476 UTR5 Human protein_coding chr1:212209034 chr1:212209034 . . 0 21 hPsi_associated_SNPs_104939 0 0 0 0 0 Cytosol 0 0.438718597638926 0.952271103858948 0 hPsi_site_3899 iPseU_CNN:0.952271103858948;iRNA_PseU:0 3900 chr1 231830177 231830177 1 + G A BLCA 231830177 - 231830157 231830197 41 TGGTGGGCAGCCTTCTGCTTCTCCACGTTCCCCGGCAGAGC TGGTGGGCAGCCTTCTGCTTTTCCACGTTCCCCGGCAGAGC Direct Gain 0 0.95587552581052 0 0.991183757781982 prediction 0.91175105162104 Functional Gain - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231830177 chr1:231830177 nonsynonymous SNV 0.971 3 21 hPsi_associated_SNPs_104940 0 0 0 0 0 Nucleus 0 0.438841511615165 0.982367515563964 0 hPsi_site_3900 iPseU_CNN:0.982367515563964;iRNA_PseU:0 3901 chr17 75524926 75524926 1 + G T rs35620944 75524926 + 75524906 75524946 41 GCTGCTGCGCGCGGGCTGGGGACCGTGCACCGCTTTGCGCG GCTGCTGCGCGCGGGCTGGGTACCGTGCACCGCTTTGCGCG Direct Gain 0 0.955875003801198 0 0.999975204467773 prediction 0.911750007602396 Functional Gain - SEPT9;LOC100507351 ENSG00000267665 ncRNA_exonic Human lincRNA chr17:75524926 chr17:75524926 . . 0 21 hPsi_associated_SNPs_104941 0 0 0 0 0 unknown 0 0.438747593205623 0.999950408935546 0 hPsi_site_3901 iPseU_CNN:0.999950408935546;iRNA_PseU:0 3902 chr19 58141763 58141763 1 + G A rs113758843 58141763 - 58141743 58141783 41 AGGTTGCAGTAAGCCGAGATCATGCCACGACACTCCAGCCT AGGTTGCAGTAAGCCGAGATTATGCCACGACACTCCAGCCT Direct Gain 0 0.955871924223628 0 0.999558568000793 prediction 0.911743848447256 Functional Gain - ZNF134;ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58141763 chr19:58141763 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_104942 0 0 0 0 0 unknown 0 0.421057765037911 0.999117136001586 0 hPsi_site_3902 iPseU_CNN:0.999117136001586;iRNA_PseU:0 3903 chr9 125048343 125048343 1 + G A rs60946137 125048343 - 125048323 125048363 41 GGGACCGGATTCCAGGTACTCTAAGACTCCTAATCCAGGCC GGGACCGGATTCCAGGTACTTTAAGACTCCTAATCCAGGCC Direct Gain 0 0.955871328878103 0 0.999199509620667 prediction 0.911742657756206 Functional Gain - MRRF ENSG00000148187 CDS Human protein_coding chr9:125048343 chr9:125048343 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_104943 0 0 0 0 0 Cytosol 0 0.438718592995102 0.998399019241334 0 hPsi_site_3903 iPseU_CNN:0.998399019241334;iRNA_PseU:0 3904 chr20 47650740 47650740 1 + G A rs115154836 47650740 - 47650720 47650760 41 TATGGGAGCGGCTTCTCATGCACAGTTACTGTCCCTCTCTG TATGGGAGCGGCTTCTCATGTACAGTTACTGTCCCTCTCTG Direct Gain 0 0.955858231091257 0 0.999993085861206 prediction 0.911716462182514 Functional Gain - ARFGEF2 ENSG00000124198 UTR3 Human protein_coding chr20:47650740 chr20:47650740 . . 0 21 hPsi_associated_SNPs_104944 0 0 0 0 0 Cytosol 0 0.43856228328458 0.999986171722412 0 hPsi_site_3904 iPseU_CNN:0.999986171722412;iRNA_PseU:0 3905 chr11 55563480 55563480 1 + C T LUSC 55563480 + 55563460 55563500 41 TGCCCTGCTGGTGGCTGGGTCATATCTCTGGGGCATGTTTG TGCCCTGCTGGTGGCTGGGTTATATCTCTGGGGCATGTTTG Direct Gain 0 0.955849051396532 0 0.995274543762207 prediction 0.911698102793064 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563480 chr11:55563480 nonsynonymous SNV 0.967 1 21 hPsi_associated_SNPs_104945 0 0 0 0 0 unknown 0 0.438724874861574 0.990549087524414 0 hPsi_site_3905 iPseU_CNN:0.990549087524414;iRNA_PseU:0 3906 chr12 8850647 8850647 1 + G A rs74766418 8850647 - 8850627 8850667 41 TCTCCCTCACCCCACTCCCACACACTCTCACTCCCACACAC TCTCCCTCACCCCACTCCCATACACTCTCACTCCCACACAC Direct Gain 0 0.955844237175762 0 0.295564204454422 prediction 0.911688474351523 Functional Gain - RIMKLB ENSG00000166532 UTR5 Human protein_coding chr12:8850647 chr12:8850647 . . 0 21 hPsi_associated_SNPs_104946 0 0 0 0 0 chromatin 0 0.436003235063531 0 0 hPsi_site_3906 iPseU_CNN:0;iRNA_PseU:0 3907 chr17 64783006 64783006 1 + G A CESC 64783006 - 64782986 64783026 41 AGACTGAAATAGCTCGTCTTCATCTTCACCATCAAATGGAG AGACTGAAATAGCTCGTCTTTATCTTCACCATCAAATGGAG Direct Gain 0 0.955840092147178 0 0.868047177791595 prediction 0.911680184294356 Functional Gain - PRKCA ENSG00000154229 CDS Human protein_coding chr17:64783006 chr17:64783006 nonsynonymous SNV 0.926 4 21 hPsi_associated_SNPs_104947 0 0 0 0 0 Ribosome 0 0.438687820758546 0.73609435558319 0 hPsi_site_3907 iPseU_CNN:0.73609435558319;iRNA_PseU:0 3908 chr19 33183266 33183266 1 + G A rs532080158 33183266 - 33183246 33183286 41 CAGCAGCACGCCCGCCTCCTCAAAGGCCTCCCGCACGGCGC CAGCAGCACGCCCGCCTCCTTAAAGGCCTCCCGCACGGCGC Direct Gain 0 0.955832722976091 0 0.999800682067871 prediction 0.911665445952182 Functional Gain - NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33183266 chr19:33183266 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_104948 0 0 0 0 0 Ribosome 0 0.438718586807276 0.999601364135742 0 hPsi_site_3908 iPseU_CNN:0.999601364135742;iRNA_PseU:0 3909 chrX 48374161 48374161 1 + G A UCEC 48374161 - 48374141 48374181 41 ATGTAGGAGGGCGCTGGCTGCATAGGTGACCAGCACAGCCG ATGTAGGAGGGCGCTGGCTGTATAGGTGACCAGCACAGCCG Direct Gain 0 0.955831335662733 0 0.861298203468323 prediction 0.911662671325466 Functional Gain - PORCN ENSG00000102312 CDS Human protein_coding chrX:48374161 chrX:48374161 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104949 0 0 0 0 0 nucleolus 0 0.439356608900765 0.722596406936646 0 hPsi_site_3909 iPseU_CNN:0.722596406936646;iRNA_PseU:0 3910 chr11 93797666 93797666 1 + C A KIRC 93797666 - 93797646 93797686 41 AGGTACTCACCATGCATTTTGTTACTCCTCTGGAAAACAGC AGGTACTCACCATGCATTTTTTTACTCCTCTGGAAAACAGC Direct Gain 0 0.955822170786597 0 0.417971938848495 prediction 0.911644341573194 Functional Gain - HEPHL1 ENSG00000181333 CDS Human protein_coding chr11:93797666 chr11:93797666 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_104950 0 0 0 0 0 exosome 0 0.438771406110918 0 0 hPsi_site_3910 iPseU_CNN:0;iRNA_PseU:0 3911 chr3 12861610 12861610 1 + C T LUSC 12861610 + 12861590 12861630 41 CCACACACCCGGAGCACCGTCATCACAGCGGTCAAGTTCCT CCACACACCCGGAGCACCGTTATCACAGCGGTCAAGTTCCT Direct Gain 0 0.955813010004137 0 0.918209314346313 prediction 0.911626020008274 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12861610 chr3:12861610 synonymous SNV . 0 21 hPsi_associated_SNPs_104951 0 0 0 0 2 chromatin 0 0.438718592427923 0.836418628692626 0 hPsi_site_3911 iPseU_CNN:0.836418628692626;iRNA_PseU:0 3912 chr22 22661321 22661321 1 + G A STAD 22661321 - 22661301 22661341 41 GATAATGGGGTAACGGGGGTCAAAGTTCTACACAAATTCAC GATAATGGGGTAACGGGGGTTAAAGTTCTACACAAATTCAC Direct Gain 0 0.955805725310145 0 0.993350505828857 prediction 0.911611450620289 Functional Gain - BMS1P20 ENSG00000272779 ncRNA_exonic Human unprocessed_pseudogene chr22:22661321 chr22:22661321 . . 0 21 hPsi_associated_SNPs_104952 0 0 0 0 0 unknown 0 0.438718593419575 0.986701011657714 0 hPsi_site_3912 iPseU_CNN:0.986701011657714;iRNA_PseU:0 3913 chr8 40012715 40012715 1 + G A rs191144811 40012715 - 40012695 40012735 41 GTAACACACAGAATCTTGGTCATCACTCAGACTCTAAACCC GTAACACACAGAATCTTGGTTATCACTCAGACTCTAAACCC Direct Gain 0 0.955805435447678 0 0.642312228679657 prediction 0.911610870895356 Functional Gain - C8orf4 ENSG00000176907 UTR3 Human protein_coding chr8:40012715 chr8:40012715 . . 0 21 hPsi_associated_SNPs_104953 0 0 0 0 0 exosome 0 0.435725070303723 0.284624457359314 0 hPsi_site_3913 iPseU_CNN:0.284624457359314;iRNA_PseU:0 3914 chr19 39868400 39868400 1 + G A BLCA 39868400 - 39868380 39868420 41 GCGACGGGAGCCGGGGCAGGCTCACTGCCATCAGTGGGAGC GCGACGGGAGCCGGGGCAGGTTCACTGCCATCAGTGGGAGC Direct Gain 0 0.955802709765133 0 0.995980381965637 prediction 0.911605419530267 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868400 chr19:39868400 synonymous SNV . 0 21 hPsi_associated_SNPs_104954 0 0 0 0 0 Ribosome 0 0.438718595039187 0.991960763931274 0 hPsi_site_3914 iPseU_CNN:0.991960763931274;iRNA_PseU:0 3915 chr1 183852983 183852983 1 + C A UCEC 183852983 - 183852963 183853003 41 AGAAGCACGTGAATTCTGCTGACTCTCCACCCTCCAGTTCC AGAAGCACGTGAATTCTGCTTACTCTCCACCCTCCAGTTCC Direct Gain 0 0.955801502237609 0 0.998542547225952 prediction 0.911603004475217 Functional Gain - RGL1 ENSG00000143344 CDS Human protein_coding chr1:183852983 chr1:183852983 stopgain 0.988 0 21 hPsi_associated_SNPs_104955 0 0 0 0 0 cytosol 0 0.438720063871107 0.997085094451904 0 hPsi_site_3915 iPseU_CNN:0.997085094451904;iRNA_PseU:0 3916 chr7 101063336 101063336 1 + G A UCEC 101063336 - 101063316 101063356 41 GGCCACCGGCAGCTCTGGTACACGCGCTGGACCACCGTCTC GGCCACCGGCAGCTCTGGTATACGCGCTGGACCACCGTCTC Direct Gain 0 0.95579943937671 0 0.983546614646912 prediction 0.911598878753419 Functional Gain - COL26A1 ENSG00000160963 CDS Human protein_coding chr7:101063336 chr7:101063336 synonymous SNV . 0 21 hPsi_associated_SNPs_104956 0 0 0 0 0 exosome 0 0.438718701184622 0.967093229293824 0 hPsi_site_3916 iPseU_CNN:0.967093229293824;iRNA_PseU:0 3917 chr3 16343246 16343246 1 + C A UCEC 16343246 - 16343226 16343266 41 CGCAGGATGGAAAGCAGAGGGTTAATTCCGACTCCTCCTGC CGCAGGATGGAAAGCAGAGGTTTAATTCCGACTCCTCCTGC Direct Gain 0 0.955794668461688 0 0.390295535326004 prediction 0.911589336923376 Functional Gain - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16343246 chr3:16343246 nonsynonymous SNV 0.973 5 21 hPsi_associated_SNPs_104957 0 0 0 0 0 Ribosome 0 0.438718593015065 0 0 hPsi_site_3917 iPseU_CNN:0;iRNA_PseU:0 3918 chr2 103006527 103006527 1 + G T UCEC 103006527 + 103006507 103006547 41 CTTTTCTAGCAGACATGGCTGATATCCCAGGCCACGTCTTC CTTTTCTAGCAGACATGGCTTATATCCCAGGCCACGTCTTC Direct Gain 0 0.955791989890189 0 0.999693870544434 prediction 0.911583979780377 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:103006527 chr2:103006527 nonsynonymous SNV 0.224 3 21 hPsi_associated_SNPs_104958 0 0 0 0 2 Nucleus 0 0.438717594690579 0.999387741088868 0 hPsi_site_3918 iPseU_CNN:0.999387741088868;iRNA_PseU:0 3919 chr5 170232728 170232728 1 + G A SKCM 170232728 - 170232708 170232748 41 GAACTCCACATCATTTCCATCATAGCCCCCTGGCAAATAAA GAACTCCACATCATTTCCATTATAGCCCCCTGGCAAATAAA Direct Gain 0 0.95578866560272 0 0.485850006341934 prediction 0.911577331205439 Functional Gain - GABRP ENSG00000094755 CDS Human protein_coding chr5:170232728 chr5:170232728 nonsynonymous SNV 0.902 1 21 hPsi_associated_SNPs_104959 0 0 0 0 0 Cytosol 0 0.438718601967299 0 0 hPsi_site_3919 iPseU_CNN:0;iRNA_PseU:0 3920 chr19 2993544 2993544 1 + G A LUSC 2993544 - 2993524 2993564 41 GACGCTCAGGATGACGCTGTCTTTTTGCCCCACCATGTGCC GACGCTCAGGATGACGCTGTTTTTTTGCCCCACCATGTGCC Direct Gain 0 0.955788485024579 0 0.99727737903595 prediction 0.911576970049159 Functional Gain - TLE6 ENSG00000104953 CDS Human protein_coding chr19:2993544 chr19:2993544 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_104960 0 0 0 0 0 exosome 0 0.438719558909482 0.9945547580719 0 hPsi_site_3920 iPseU_CNN:0.9945547580719;iRNA_PseU:0 3921 chr1 227149105 227149105 1 + G T UCEC 227149105 + 227149085 227149125 41 GGATGGCTGCCATATTGGGAGACACCATCATGGTGGCTAAA GGATGGCTGCCATATTGGGATACACCATCATGGTGGCTAAA Direct Gain 0 0.955787053958958 0 0.912882566452026 prediction 0.911574107917916 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227149105 chr1:227149105 nonsynonymous SNV 0.490 4 21 hPsi_associated_SNPs_104961 0 0 1 0 1 Nucleus 0 0.438718688953746 0.825765132904052 0 hPsi_site_3921 iPseU_CNN:0.825765132904052;iRNA_PseU:0 3922 chr20 279088 279088 1 + G A UCEC 279088 - 279068 279108 41 CAGATCCCAAACCTGTCGGTCACTTTCACCGGCACGGCCAG CAGATCCCAAACCTGTCGGTTACTTTCACCGGCACGGCCAG Direct Gain 0 0.955777540943693 0 0.999999701976776 prediction 0.911555081887387 Functional Gain - ZCCHC3 ENSG00000177764 CDS Human other chr20:279088 chr20:279088 synonymous SNV . 0 21 hPsi_associated_SNPs_104962 0 0 0 0 0 Cytosol 0 0.442261332233345 0.999999403953552 0 hPsi_site_3922 iPseU_CNN:0.999999403953552;iRNA_PseU:0 3923 chr19 14492227 14492227 1 + C T rs527745246 14492227 + 14492207 14492247 41 GCTGTCCGCCCCCCCTCCTTCATAAAGTCCTGGCCTCGGGA GCTGTCCGCCCCCCCTCCTTTATAAAGTCCTGGCCTCGGGA Direct Gain 0 0.955768311670253 0 0.578285694122314 prediction 0.911536623340506 Functional Gain - ADGRE5 ENSG00000123146 UTR5 Human protein_coding chr19:14492227 chr19:14492227 . . 0 21 hPsi_associated_SNPs_104963 0 0 1 0 0 Cytosol 0 0.438718592995243 0.156571388244628 0 hPsi_site_3923 iPseU_CNN:0.156571388244628;iRNA_PseU:0 3924 chr19 11040374 11040374 1 + G T UCEC 11040374 + 11040354 11040394 41 GGTGCAGGCGGAGGCCCCGAGATGAAACCCTGAGGCCCCCG GGTGCAGGCGGAGGCCCCGATATGAAACCCTGAGGCCCCCG Direct Gain 0 0.95576420938713 0 0.999997437000275 prediction 0.911528418774261 Functional Gain - TIMM29 ENSG00000142444 CDS Human protein_coding chr19:11040374 chr19:11040374 nonsynonymous SNV 0.129 1 21 hPsi_associated_SNPs_104964 0 0 1 0 0 unknown 0 0.438712691876051 0.99999487400055 0 hPsi_site_3924 iPseU_CNN:0.99999487400055;iRNA_PseU:0 3925 chr16 66918387 66918387 1 + C A OV 66918387 - 66918367 66918407 41 GAAAATCATCTTCCTCTGTTGATGTGTGTCTGTAGGCTTTG GAAAATCATCTTCCTCTGTTTATGTGTGTCTGTAGGCTTTG Direct Gain 0 0.955762984413701 0 0.991914629936218 prediction 0.911525968827402 Functional Gain - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918387 chr16:66918387 stopgain 0.982 0 21 hPsi_associated_SNPs_104965 0 0 0 0 0 nucleolus 0 0.43883074767075 0.983829259872436 0 hPsi_site_3925 iPseU_CNN:0.983829259872436;iRNA_PseU:0 3926 chr2 96687149 96687149 1 + G A rs60607082 96687149 - 96687129 96687169 41 GGAGGTGGGGGGGTCCCAGTCAGGATGACATCCCCTGGGTA GGAGGTGGGGGGGTCCCAGTTAGGATGACATCCCCTGGGTA Direct Gain 0 0.955757247311146 0 0.993724226951599 prediction 0.911514494622293 Functional Gain - FAHD2CP ENSG00000231584 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:96687149 chr2:96687149 . . 0 21 hPsi_associated_SNPs_104966 0 0 0 0 0 unknown 0 0.43870490768616 0.987448453903198 0 hPsi_site_3926 iPseU_CNN:0.987448453903198;iRNA_PseU:0 3927 chr8 102570785 102570785 1 + C T BLCA 102570785 + 102570765 102570805 41 AAGCGGGAACAGTACAGCATCAGCTTCCCCGAGAGCTCTGC AAGCGGGAACAGTACAGCATTAGCTTCCCCGAGAGCTCTGC Direct Gain 0 0.95575155212618 0 0.971922934055328 prediction 0.91150310425236 Functional Gain - GRHL2 ENSG00000083307 CDS Human protein_coding chr8:102570785 chr8:102570785 synonymous SNV . 0 21 hPsi_associated_SNPs_104967 0 0 0 0 0 Nucleus 0 0.43871859298552 0.943845868110656 0 hPsi_site_3927 iPseU_CNN:0.943845868110656;iRNA_PseU:0 3928 chr10 72298051 72298051 1 + G A LGG 72298051 - 72298031 72298071 41 CCAGCGGCTGAAACTGAGGGCAAAGGCCAGCGGGTACTGCA CCAGCGGCTGAAACTGAGGGTAAAGGCCAGCGGGTACTGCA Direct Gain 0 0.955747140498842 0 0.909600734710693 prediction 0.911494280997684 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72298051 chr10:72298051 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104968 0 0 0 0 0 Ribosome 0 0.438839237303916 0.819201469421386 0 hPsi_site_3928 iPseU_CNN:0.819201469421386;iRNA_PseU:0 3929 chr3 196613016 196613016 1 + C T LUAD 196613016 + 196612996 196613036 41 TGGTGAAGGGGACGAACTCTCATGTGCCTGATTGCCACACT TGGTGAAGGGGACGAACTCTTATGTGCCTGATTGCCACACT Direct Gain 0 0.955746016515304 0 0.947482407093048 prediction 0.911492033030607 Functional Gain - SENP5 ENSG00000119231 CDS Human protein_coding chr3:196613016 chr3:196613016 nonsynonymous SNV 0.654 1 21 hPsi_associated_SNPs_104969 0 0 1 0 0 Cytosol 0 0.438507037586486 0.894964814186096 0 hPsi_site_3929 iPseU_CNN:0.894964814186096;iRNA_PseU:0 3930 chr9 120476873 120476873 1 + C A rs56380595 120476873 - 120476853 120476893 41 TGTACCCACTGTTCCTTCTGGATTCCATGATTTACCATCCA TGTACCCACTGTTCCTTCTGTATTCCATGATTTACCATCCA Direct Gain 0 0.955741875477654 0 0.992513298988342 prediction 0.911483750955308 Functional Gain - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120476873 chr9:120476873 nonsynonymous SNV 0.146 4 21 hPsi_associated_SNPs_104970 0 0 0 0 0 cytosol 0 0.438719169574185 0.985026597976684 0 hPsi_site_3930 iPseU_CNN:0.985026597976684;iRNA_PseU:0 3931 chr20 825844 825844 1 + G A rs7273455 825844 - 825824 825864 41 GGCTGGGGGAGGACGGCCGGCTCCCTCGGCCCGTCCAGGAG GGCTGGGGGAGGACGGCCGGTTCCCTCGGCCCGTCCAGGAG Direct Gain 0 0.955737273070521 0 0.999036908149719 prediction 0.911474546141042 Functional Gain - FAM110A ENSG00000125898 CDS Human protein_coding chr20:825844 chr20:825844 nonsynonymous SNV 0.128 0 21 hPsi_associated_SNPs_104971 0 0 0 0 0 Cytosol 0 0.438717714823369 0.998073816299438 0 hPsi_site_3931 iPseU_CNN:0.998073816299438;iRNA_PseU:0 3932 chr22 39449503 39449503 1 + G T rs5750734 39449503 + 39449483 39449523 41 GGTGGCATGCACCTGTAGTTGAAGCTACTTGGAAGGATGAA GGTGGCATGCACCTGTAGTTTAAGCTACTTGGAAGGATGAA Direct Gain 0 0.955734871729656 0 0.969957172870636 prediction 0.911469743459313 Functional Gain - APOBEC3F ENSG00000128394 UTR3 Human protein_coding chr22:39449503 chr22:39449503 . . 0 21 hPsi_associated_SNPs_104972 0 0 1 0 0 Nucleus 0 0.438718578321872 0.939914345741272 0 hPsi_site_3932 iPseU_CNN:0.939914345741272;iRNA_PseU:0 3933 chr20 36962855 36962855 1 + G A SKCM 36962855 - 36962835 36962875 41 AGAATGGGTACAATGTAGTTCATGATATCCTGCAGCAATTC AGAATGGGTACAATGTAGTTTATGATATCCTGCAGCAATTC Direct Gain 0 0.955734055039351 0 0.923498451709747 prediction 0.911468110078701 Functional Gain - BPI ENSG00000101425 CDS Human protein_coding chr20:36962855 chr20:36962855 nonsynonymous SNV 0.174 0 21 hPsi_associated_SNPs_104973 0 0 0 0 0 Nucleus 0 0.438706361885014 0.846996903419494 0 hPsi_site_3933 iPseU_CNN:0.846996903419494;iRNA_PseU:0 3934 chr9 71835842 71835842 1 + C A rs41305539 71835842 - 71835822 71835862 41 ATCCAGGGGAGGGCTGGCCTGAAGTGCGGCCACCTGGACCT ATCCAGGGGAGGGCTGGCCTTAAGTGCGGCCACCTGGACCT Direct Gain 0 0.955718661367293 0 0.017513781785965 prediction 0.911437322734585 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71835842 chr9:71835842 nonsynonymous SNV 0.021 0 21 hPsi_associated_SNPs_104974 2 0 0 0 0 Nucleus 0 0.438718596669196 0 0 hPsi_site_3934 iPseU_CNN:0;iRNA_PseU:0 3935 chr3 183368878 183368878 1 + G A BLCA 183368878 - 183368858 183368898 41 GGAGCTCGTGTAACAGTGGTCTTCTCAGATCAACGGCACGA GGAGCTCGTGTAACAGTGGTTTTCTCAGATCAACGGCACGA Direct Gain 0 0.955710007301048 0 0.993508219718933 prediction 0.911420014602097 Functional Gain - KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183368878 chr3:183368878 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_104975 0 0 0 0 0 Ribosome 0 0.438724286706365 0.987016439437866 0 hPsi_site_3935 iPseU_CNN:0.987016439437866;iRNA_PseU:0 3936 chr19 11132434 11132434 1 + C A LGG 11132434 - 11132414 11132454 41 GTGGTGGTTCTTCATGCGGTGACCTTCGTCCACAATCATGT GTGGTGGTTCTTCATGCGGTTACCTTCGTCCACAATCATGT Direct Gain 0 0.955707695451432 0 0.998762011528015 prediction 0.911415390902865 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11132434 chr19:11132434 nonsynonymous SNV 0.978 5 21 hPsi_associated_SNPs_104976 0 0 0 0 0 Nucleus 0 0.432347878289738 0.99752402305603 0 hPsi_site_3936 iPseU_CNN:0.99752402305603;iRNA_PseU:0 3937 chr22 44968262 44968262 1 + C T rs114364590 44968262 + 44968242 44968282 41 GGCCGTGAAAACTCAAAAGACACAGTCTTTAAAATAAGGAC GGCCGTGAAAACTCAAAAGATACAGTCTTTAAAATAAGGAC Direct Gain 0 0.955706933873831 0 0.999320447444916 prediction 0.911413867747662 Functional Gain - LINC00207 ENSG00000187012 downstream Human lincRNA chr22:44968262 chr22:44968262 . . 0 21 hPsi_associated_SNPs_104977 0 0 0 0 0 unknown 0 0.438693986506747 0.998640894889832 0 hPsi_site_3937 iPseU_CNN:0.998640894889832;iRNA_PseU:0 3938 chr19 15648387 15648387 1 + C T rs141382984 15648387 + 15648367 15648407 41 AAGGTGACAAGTGGAGCCGGCACCGTCGCCTGCTGACACCC AAGGTGACAAGTGGAGCCGGTACCGTCGCCTGCTGACACCC Direct Gain 0 0.955695960777061 0 0.999996066093445 prediction 0.911391921554123 Functional Gain - CYP4F22 ENSG00000171954 CDS Human protein_coding chr19:15648387 chr19:15648387 nonsynonymous SNV 0.728 3 21 hPsi_associated_SNPs_104978 0 0 0 0 2 exosome 0 0.438721125153889 0.99999213218689 0 hPsi_site_3938 iPseU_CNN:0.99999213218689;iRNA_PseU:0 3939 chr11 119060561 119060561 1 + G A rs530572030 119060561 - 119060541 119060581 41 AGAGGGCAGGCATAGCTGGTCTCCAAATTTTTGCATTACAC AGAGGGCAGGCATAGCTGGTTTCCAAATTTTTGCATTACAC Direct Gain 0 0.955691237231024 0 0.162286043167114 prediction 0.911382474462047 Functional Gain - PDZD3 ENSG00000172367;ENSG00000248712 UTR3 Human other chr11:119060561 chr11:119060561 . . 0 21 hPsi_associated_SNPs_104979 0 0 0 0 0 exosome 0 0.436406470055623 0 0 hPsi_site_3939 iPseU_CNN:0;iRNA_PseU:0 3940 chr3 50609606 50609606 1 + G A STAD 50609606 - 50609586 50609626 41 CGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCC CGAGGAATAAACACTGGGGGTACCATCCTTAGGCTGAGCCC Direct Gain 0 0.955680996136027 0 0.999506592750549 prediction 0.911361992272055 Functional Gain - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50609606 chr3:50609606 synonymous SNV . 0 21 hPsi_associated_SNPs_104980 0 0 0 0 0 Ribosome 0 0.438719789876149 0.999013185501098 0 hPsi_site_3940 iPseU_CNN:0.999013185501098;iRNA_PseU:0 3941 chr10 26789999 26789999 1 + G T LUSC 26789999 + 26789979 26790019 41 CACCAGCCGATCCTGTGTTAGACCTTCCACTGCCACCACCA CACCAGCCGATCCTGTGTTATACCTTCCACTGCCACCACCA Direct Gain 0 0.955675726145881 0 0.999905586242676 prediction 0.911351452291762 Functional Gain - APBB1IP ENSG00000077420 CDS Human protein_coding chr10:26789999 chr10:26789999 nonsynonymous SNV 0.182 3 21 hPsi_associated_SNPs_104981 0 0 0 0 1 nucleus 0 0.438670417822649 0.999811172485352 0 hPsi_site_3941 iPseU_CNN:0.999811172485352;iRNA_PseU:0 3942 chr11 6566735 6566735 1 + G A UCEC 6566735 - 6566715 6566755 41 TCAAGCAGAGCCTCCTCCATCTCGGCCCGCCATACCACCTC TCAAGCAGAGCCTCCTCCATTTCGGCCCGCCATACCACCTC Direct Gain 0 0.955674561380074 0 0.955548167228699 prediction 0.911349122760147 Functional Gain - DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6566735 chr11:6566735 synonymous SNV . 0 21 hPsi_associated_SNPs_104982 0 0 0 0 0 chromatin 0 0.43871888669735 0.911096334457398 0 hPsi_site_3942 iPseU_CNN:0.911096334457398;iRNA_PseU:0 3943 chr2 139310249 139310249 1 + G T LUSC 139310249 + 139310229 139310269 41 ACAAGCTTACATTATTTTGTGAGGTGGGTACATCTTTTATT ACAAGCTTACATTATTTTGTTAGGTGGGTACATCTTTTATT Direct Gain 0 0.955668404613228 0 0.222106218338013 prediction 0.911336809226456 Functional Gain - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139310249 chr2:139310249 stopgain 1.000 1 21 hPsi_associated_SNPs_104983 0 0 1 0 1 chromatin 0 0.438720719633902 0 0 hPsi_site_3943 iPseU_CNN:0;iRNA_PseU:0 3944 chr1 154551368 154551368 1 + G A rs4845653 154551368 - 154551348 154551388 41 ATAGTCTCAACCTGTTTCCTCACTTCCCCTCCCAAACCCTT ATAGTCTCAACCTGTTTCCTTACTTCCCCTCCCAAACCCTT Direct Gain 0 0.955667479620427 0 0.99914163351059 prediction 0.911334959240854 Functional Gain - CHRNB2 ENSG00000160716 UTR3 Human protein_coding chr1:154551368 chr1:154551368 . . 0 21 hPsi_associated_SNPs_104984 0 0 1 0 0 nucleus 0 0.438718592994436 0.99828326702118 0 hPsi_site_3944 iPseU_CNN:0.99828326702118;iRNA_PseU:0 3945 chr17 74774906 74774906 1 + G T rs58520410 74774906 + 74774886 74774926 41 ATAGCAAAGCTGGGTGTGGTGTTGCACCGCTATACTCCCAG ATAGCAAAGCTGGGTGTGGTTTTGCACCGCTATACTCCCAG Direct Gain 0 0.955663430544031 0 0.999605417251587 prediction 0.911326861088061 Functional Gain - MFSD11 ENSG00000092931 UTR3 Human protein_coding chr17:74774906 chr17:74774906 . . 0 21 hPsi_associated_SNPs_104985 0 0 1 0 0 Endoplasmic reticulum 0 0.438681642027589 0.999210834503174 0 hPsi_site_3945 iPseU_CNN:0.999210834503174;iRNA_PseU:0 3946 chr3 112993223 112993223 1 + C T rs147556461 112993223 + 112993203 112993243 41 CTTCCTGTTGGTCCTCCAGGCATAACCCCAAGGCTATGGCA CTTCCTGTTGGTCCTCCAGGTATAACCCCAAGGCTATGGCA Direct Gain 0 0.955661486471408 0 0.999994516372681 prediction 0.911322972942816 Functional Gain - BOC ENSG00000144857 CDS Human protein_coding chr3:112993223 chr3:112993223 synonymous SNV . 0 21 hPsi_associated_SNPs_104986 0 0 0 0 1 nucleoplasm 0 0.438718583786 0.999989032745362 0 hPsi_site_3946 iPseU_CNN:0.999989032745362;iRNA_PseU:0 3947 chr5 140168205 140168205 1 + C A HNSC 140168205 - 140168185 140168225 41 CTGACGTGTTAAGACTTGGAGATAGGCCTGGGCTGAAGGCC CTGACGTGTTAAGACTTGGATATAGGCCTGGGCTGAAGGCC Direct Gain 0 0.955653564542263 0 0.0261172354221344 prediction 0.911307129084526 Functional Gain - PCDHA1 ENSG00000204970 CDS Human protein_coding chr5:140168205 chr5:140168205 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_104987 0 0 0 0 0 insoluble cytoplasm 0 0.438501909896617 0 0 hPsi_site_3947 iPseU_CNN:0;iRNA_PseU:0 3948 chr17 15621276 15621276 1 + C T rs186264311 15621276 + 15621256 15621296 41 TTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCGGGCTG TTTTTTTTTTGAGACAGAGTTTTGCTCTGTTGCCCGGGCTG Direct Gain 0 0.955650567919204 0 0.618487000465393 prediction 0.911301135838408 Functional Gain - ZNF286A ENSG00000187607 UTR3 Human protein_coding chr17:15621276 chr17:15621276 . . 0 21 hPsi_associated_SNPs_104988 0 0 0 0 0 Nucleus 0 0.438716742550457 0.236974000930786 0 hPsi_site_3948 iPseU_CNN:0.236974000930786;iRNA_PseU:0 3949 chr2 162242036 162242036 1 + G A UCEC 162242036 - 162242016 162242056 41 CCAGATTCGAAGTTGTTTGTCTTGGTTCATGTCCTAAGACC CCAGATTCGAAGTTGTTTGTTTTGGTTCATGTCCTAAGACC Direct Gain 0 0.95564939824951 0 0.985352575778961 prediction 0.911298796499019 Functional Gain - PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162242036 chr2:162242036 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_104989 0 0 0 0 0 Cytosol 0 0.438718593125428 0.970705151557922 0 hPsi_site_3949 iPseU_CNN:0.970705151557922;iRNA_PseU:0 3950 chr11 68822765 68822765 1 + C A LUSC 68822765 - 68822745 68822785 41 AGAGCACCTCGACACTCTCGGTCAGGCCGCAGGGCGGCTCC AGAGCACCTCGACACTCTCGTTCAGGCCGCAGGGCGGCTCC Direct Gain 0 0.955647236981816 0 0.992881655693054 prediction 0.911294473963631 Functional Gain - TPCN2 ENSG00000162341 CDS Human protein_coding chr11:68822765 chr11:68822765 nonsynonymous SNV 0.656 5 21 hPsi_associated_SNPs_104990 0 0 0 0 0 chromatin 0 0.438718427844325 0.985763311386108 0 hPsi_site_3950 iPseU_CNN:0.985763311386108;iRNA_PseU:0 3951 chr2 189156398 189156398 1 + T A rs192872084 189156398 - 189156378 189156418 41 CGGAGGTGGGTGGAGGGTGGAATGAGAGAGAAACCCATCCG CGGAGGTGGGTGGAGGGTGGTATGAGAGAGAAACCCATCCG Direct Gain 0 0.955636560204944 0 0.996817231178284 prediction 0.911273120409889 Functional Gain - GULP1 ENSG00000144366 UTR5 Human protein_coding chr2:189156398 chr2:189156398 . . 0 21 hPsi_associated_SNPs_104991 0 0 0 0 0 Ribosome 0 0.438617502884139 0.993634462356568 0 hPsi_site_3951 iPseU_CNN:0.993634462356568;iRNA_PseU:0 3952 chr16 597885 597885 1 + C T rs142840835 597885 + 597865 597905 41 ACCTGGTCATGTGCCAAGTGCACGCTCAGAAACCCCACAGT ACCTGGTCATGTGCCAAGTGTACGCTCAGAAACCCCACAGT Direct Gain 0 0.955630384508959 0 0.999842643737793 prediction 0.911260769017918 Functional Gain - CAPN15 ENSG00000103326 CDS Human protein_coding chr16:597885 chr16:597885 nonsynonymous SNV 0.143 0 21 hPsi_associated_SNPs_104992 0 0 0 0 0 chromatin 0 0.413968747336858 0.999685287475586 0 hPsi_site_3952 iPseU_CNN:0.999685287475586;iRNA_PseU:0 3953 chr18 43219767 43219767 1 + G T LUSC 43219767 + 43219747 43219787 41 TATGGCTGTGACAATCCCTGGACAGGCGGCGTGTTCCTGGT TATGGCTGTGACAATCCCTGTACAGGCGGCGTGTTCCTGGT Direct Gain 0 0.955630254472793 0 0.999997138977051 prediction 0.911260508945586 Functional Gain - SLC14A2 ENSG00000132874 CDS Human protein_coding chr18:43219767 chr18:43219767 nonsynonymous SNV 0.896 4 21 hPsi_associated_SNPs_104993 0 0 0 0 2 Nucleus 0 0.438750552842788 0.999994277954102 0 hPsi_site_3953 iPseU_CNN:0.999994277954102;iRNA_PseU:0 3954 chr2 204292753 204292753 1 + G A rs72926403 204292753 - 204292733 204292773 41 TCAAACGGGTGGCAATCGTTCACCACCCTCAGAGTGTTGGG TCAAACGGGTGGCAATCGTTTACCACCCTCAGAGTGTTGGG Direct Gain 0 0.955619964370383 0 0.999999046325684 prediction 0.911239928740765 Functional Gain - ABI2 ENSG00000138443 UTR3 Human protein_coding chr2:204292753 chr2:204292753 . . 0 21 hPsi_associated_SNPs_104994 0 0 0 0 0 Cytosol 0 0.438778844534566 0.999998092651368 0 hPsi_site_3954 iPseU_CNN:0.999998092651368;iRNA_PseU:0 3955 chr9 84531580 84531580 1 + C T BLCA 84531580 + 84531560 84531600 41 AGTCTCTGCATCCTACTATTCTTGTCCAACGTGGCCATTCC AGTCTCTGCATCCTACTATTTTTGTCCAACGTGGCCATTCC Direct Gain 0 0.955619202789284 0 0.996367931365967 prediction 0.911238405578568 Functional Gain - SPATA31D5P ENSG00000240632 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:84531580 chr9:84531580 . . 0 21 hPsi_associated_SNPs_104995 0 0 0 0 0 unknown 0 0.438683872936024 0.992735862731934 0 hPsi_site_3955 iPseU_CNN:0.992735862731934;iRNA_PseU:0 3956 chr2 102626224 102626224 1 + G T KIRP 102626224 + 102626204 102626244 41 AGACACGGATGTGGGCCCAGGACGGTGCTCTGTGGCTTCTG AGACACGGATGTGGGCCCAGTACGGTGCTCTGTGGCTTCTG Direct Gain 0 0.955615044535158 0 0.996975123882294 prediction 0.911230089070315 Functional Gain - IL1R2 ENSG00000115590 CDS Human protein_coding chr2:102626224 chr2:102626224 nonsynonymous SNV 0.018 0 21 hPsi_associated_SNPs_104996 0 0 0 0 2 Endoplasmic reticulum 0 0.4387183492424 0.993950247764588 0 hPsi_site_3956 iPseU_CNN:0.993950247764588;iRNA_PseU:0 3957 chr19 56203149 56203149 1 + C T CESC 56203149 + 56203129 56203169 41 ATGGACCTTGCTGACGTCTTCACGGCCCCAGCTCCTGCCCC ATGGACCTTGCTGACGTCTTTACGGCCCCAGCTCCTGCCCC Direct Gain 0 0.95560344502888 0 0.943905174732208 prediction 0.911206890057759 Functional Gain - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56203149 chr19:56203149 synonymous SNV . 0 21 hPsi_associated_SNPs_104997 0 0 1 0 1 chromatin 0 0.438718957613476 0.887810349464416 0 hPsi_site_3957 iPseU_CNN:0.887810349464416;iRNA_PseU:0 3958 chr20 35075130 35075130 1 + G A SKCM 35075130 - 35075110 35075150 41 GGCTGACTCGCAGGCCGCCTCATACTGGTCACTCAGCTCTG GGCTGACTCGCAGGCCGCCTTATACTGGTCACTCAGCTCTG Direct Gain 0 0.955600256736104 0 0.99998950958252 prediction 0.911200513472208 Functional Gain - DLGAP4 ENSG00000080845 CDS Human protein_coding chr20:35075130 chr20:35075130 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_104998 0 0 0 0 0 Cytosol 0 0.438722110130452 0.99997901916504 0 hPsi_site_3958 iPseU_CNN:0.99997901916504;iRNA_PseU:0 3959 chr10 24834318 24834318 1 + T A rs535879132 24834318 - 24834298 24834338 41 TTCCCGAGGTGTTCAGATGAAACACTACATTCACCAAAGAA TTCCCGAGGTGTTCAGATGATACACTACATTCACCAAAGAA Direct Gain 0 0.955586898817124 0 0.99967223405838 prediction 0.911173797634248 Functional Gain - KIAA1217 ENSG00000120549 UTR3 Human protein_coding chr10:24834318 chr10:24834318 . . 0 21 hPsi_associated_SNPs_104999 0 0 0 0 0 Nucleus 0 0.438804242636989 0.99934446811676 0 hPsi_site_3959 iPseU_CNN:0.99934446811676;iRNA_PseU:0 3960 chr12 32687411 32687411 1 + G T UCEC 32687411 + 32687391 32687431 41 GATTAATTATCAGTATATGTGAAATCATGTCCACTGATCAA GATTAATTATCAGTATATGTTAAATCATGTCCACTGATCAA Direct Gain 0 0.955582048703766 0 0.057608962059021 prediction 0.911164097407532 Functional Gain - FGD4 ENSG00000139132 CDS Human protein_coding chr12:32687411 chr12:32687411 stopgain 0.951 0 21 hPsi_associated_SNPs_105000 0 0 0 0 1 nucleoplasm 0 0.438064454337683 0 0 hPsi_site_3960 iPseU_CNN:0;iRNA_PseU:0 3961 chr19 34710384 34710384 1 + G A BLCA 34710384 - 34710364 34710404 41 TCAAAGTCTTTCTCAAATTTCATTGGCCCATCTCGCCGAAT TCAAAGTCTTTCTCAAATTTTATTGGCCCATCTCGCCGAAT Direct Gain 0 0.955578859422491 0 0.987717628479004 prediction 0.911157718844982 Functional Gain - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34710384 chr19:34710384 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105001 0 0 0 0 0 Cytosol 0 0.438705073859269 0.975435256958008 0 hPsi_site_3961 iPseU_CNN:0.975435256958008;iRNA_PseU:0 3962 chr10 5957433 5957433 1 + G T UCEC 5957433 + 5957413 5957453 41 CAGAGCAGGTTTCTGTATGTGACATTCAACAAGAGCATCGC CAGAGCAGGTTTCTGTATGTTACATTCAACAAGAGCATCGC Direct Gain 0 0.955570111663602 0 1 prediction 0.911140223327204 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5957433 chr10:5957433 synonymous SNV . 0 21 hPsi_associated_SNPs_105002 0 0 1 0 1 Ribosome 0 0.43900656904763 1 0 hPsi_site_3962 iPseU_CNN:1;iRNA_PseU:0 3963 chr20 51871749 51871749 1 + G T COAD 51871749 + 51871729 51871769 41 ATTGCACCAAAGTGGAAAGTGATGCCACTGGTTTCTATGCC ATTGCACCAAAGTGGAAAGTTATGCCACTGGTTTCTATGCC Direct Gain 0 0.955559012290647 0 0.90346086025238 prediction 0.911118024581294 Functional Gain - TSHZ2 ENSG00000182463 CDS Human protein_coding chr20:51871749 chr20:51871749 synonymous SNV . 0 21 hPsi_associated_SNPs_105003 0 0 0 0 0 Cytoplasm 0 0.438682435812511 0.80692172050476 0 hPsi_site_3963 iPseU_CNN:0.80692172050476;iRNA_PseU:0 3964 chr22 22697817 22697817 1 + C T SARC 22697817 + 22697797 22697837 41 GCATCAGCCTCCCTGGGAGCCTCGGTCACACTCACCTGCAC GCATCAGCCTCCCTGGGAGCTTCGGTCACACTCACCTGCAC Direct Gain 0 0.955549553211749 0 0.987638473510742 prediction 0.911099106423498 Functional Gain - BMS1P20;ZNF280B ENSG00000223350 CDS Human IG_V_gene chr22:22697817 chr22:22697817 synonymous SNV . 0 21 hPsi_associated_SNPs_105004 0 0 0 0 0 unknown 0 0.438474175602061 0.975276947021484 0 hPsi_site_3964 iPseU_CNN:0.975276947021484;iRNA_PseU:0 3965 chr1 8397904 8397904 1 + C T LUAD 8397904 + 8397884 8397924 41 TCATTCGAGGGGATGTTGCTCTTCTACACAGACTTCATGGG TCATTCGAGGGGATGTTGCTTTTCTACACAGACTTCATGGG Direct Gain 0 0.955547109185523 0 0.959899663925171 prediction 0.911094218371047 Functional Gain - SLC45A1 ENSG00000162426 CDS Human protein_coding chr1:8397904 chr1:8397904 synonymous SNV . 0 21 hPsi_associated_SNPs_105005 0 0 0 0 0 exosome 0 0.438717683532848 0.919799327850342 0 hPsi_site_3965 iPseU_CNN:0.919799327850342;iRNA_PseU:0 3966 chr1 150230532 150230532 1 + C T READ 150230532 + 150230512 150230552 41 TCCTGGGACACTATGTTGTTCTCCGCCCTCCTGCTGGAGGT TCCTGGGACACTATGTTGTTTTCCGCCCTCCTGCTGGAGGT Direct Gain 0 0.955542442142315 0 0.958941578865051 prediction 0.911084884284631 Functional Gain - CA14 ENSG00000118298 CDS Human protein_coding chr1:150230532 chr1:150230532 synonymous SNV . 0 21 hPsi_associated_SNPs_105006 0 0 0 0 1 exosome 0 0.439320262953017 0.917883157730102 0 hPsi_site_3966 iPseU_CNN:0.917883157730102;iRNA_PseU:0 3967 chr10 71851674 71851674 1 + G A rs114246674 71851674 - 71851654 71851694 41 GGTTTGGCAGCCTTGGATTTCTTCCCCCCCTTCTTGCCTGA GGTTTGGCAGCCTTGGATTTTTTCCCCCCCTTCTTGCCTGA Direct Gain 0 0.955541495781216 0 0.889320433139801 prediction 0.911082991562432 Functional Gain - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71851674 chr10:71851674 synonymous SNV . 0 21 hPsi_associated_SNPs_105007 0 0 0 0 0 Ribosome 0 0.438718592995102 0.778640866279602 0 hPsi_site_3967 iPseU_CNN:0.778640866279602;iRNA_PseU:0 3968 chr1 213142248 213142248 1 + G A rs41277154 213142248 - 213142228 213142268 41 TGTAAGGGAGGTGGTCATTTCAATGACCTAAATCCAGAGGC TGTAAGGGAGGTGGTCATTTTAATGACCTAAATCCAGAGGC Direct Gain 0 0.955532236552556 0 0.0210152566432953 prediction 0.911064473105111 Functional Gain - VASH2 ENSG00000143494 intronic Human protein_coding chr1:213142248 chr1:213142248 . . 0 21 hPsi_associated_SNPs_105008 0 0 0 0 0 nucleoplasm 0 0.438718592802482 0 0 hPsi_site_3968 iPseU_CNN:0;iRNA_PseU:0 3969 chr17 40120175 40120175 1 + G A UCEC 40120175 - 40120155 40120195 41 TGAAGGAAGGGAAACTGCAGCTCAGGCTTGTCCTTGGCCCC TGAAGGAAGGGAAACTGCAGTTCAGGCTTGTCCTTGGCCCC Direct Gain 0 0.955526467314589 0 0.161272078752518 prediction 0.911052934629179 Functional Gain - CNP ENSG00000173786 CDS Human protein_coding chr17:40120175 chr17:40120175 synonymous SNV . 0 21 hPsi_associated_SNPs_105009 0 0 1 0 0 Ribosome 0 0.438701785314262 0 0 hPsi_site_3969 iPseU_CNN:0;iRNA_PseU:0 3970 chr13 42783527 42783527 1 + G A BLCA 42783527 - 42783507 42783547 41 TGGAGGCTGAACCCACGCTTCACCATCCACTTGCACTGGGA TGGAGGCTGAACCCACGCTTTACCATCCACTTGCACTGGGA Direct Gain 0 0.955526226843091 0 0.766724050045013 prediction 0.911052453686183 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42783527 chr13:42783527 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105010 0 0 0 0 0 chromatin 0 0.438717305380514 0.533448100090026 0 hPsi_site_3970 iPseU_CNN:0.533448100090026;iRNA_PseU:0 3971 chr10 102893963 102893963 1 + G A rs7090185 102893963 - 102893943 102893983 41 GACGTGCGCGGCTTCTTCTTCTTGGGGGGCGTCCGGTTCTG GACGTGCGCGGCTTCTTCTTTTTGGGGGGCGTCCGGTTCTG Direct Gain 0 0.955520060229429 0 0.999704241752625 prediction 0.911040120458859 Functional Gain - TLX1 ENSG00000107807 CDS Human protein_coding chr10:102893963 chr10:102893963 synonymous SNV . 0 21 hPsi_associated_SNPs_105011 0 0 0 0 0 exosome 0 0.438718430191743 0.99940848350525 0 hPsi_site_3971 iPseU_CNN:0.99940848350525;iRNA_PseU:0 3972 chr1 155686914 155686914 1 + G A BRCA 155686914 - 155686894 155686934 41 ATATTAGTAACTCACCGGGTCATTCTCATTGGTGCGGGAAA ATATTAGTAACTCACCGGGTTATTCTCATTGGTGCGGGAAA Direct Gain 0 0.955510737857035 0 0.959569334983826 prediction 0.91102147571407 Functional Gain - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155686914 chr1:155686914 nonsynonymous SNV 0.897 3 21 hPsi_associated_SNPs_105012 0 0 0 0 0 chromatin 0 0.44125394762026 0.919138669967652 0 hPsi_site_3972 iPseU_CNN:0.919138669967652;iRNA_PseU:0 3973 chr10 69881370 69881370 1 + G T LUSC 69881370 + 69881350 69881390 41 AAGGAGGCGGAGGCCAAGATGACCTTCCAGATCTTTCAGCC AAGGAGGCGGAGGCCAAGATTACCTTCCAGATCTTTCAGCC Direct Gain 0 0.955505081917366 0 0.991715550422668 prediction 0.911010163834732 Functional Gain - MYPN ENSG00000138347 CDS Human protein_coding chr10:69881370 chr10:69881370 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105013 0 0 1 0 0 Cytosol 0 0.438717494263057 0.983431100845336 0 hPsi_site_3973 iPseU_CNN:0.983431100845336;iRNA_PseU:0 3974 chr9 102992040 102992040 1 + C T UCEC 102992040 + 102992020 102992060 41 GGGATTCCTGATGTTGAAGGCAAGATCCCACTTCACTGGGC GGGATTCCTGATGTTGAAGGTAAGATCCCACTTCACTGGGC Direct Gain 0 0.955500511479777 0 0.996589303016663 prediction 0.911001022959553 Functional Gain - INVS ENSG00000119509 CDS Human protein_coding chr9:102992040 chr9:102992040 synonymous SNV . 0 21 hPsi_associated_SNPs_105014 0 0 1 0 2 chromatin 0 0.438718535922349 0.993178606033326 0 hPsi_site_3974 iPseU_CNN:0.993178606033326;iRNA_PseU:0 3975 chr7 45115443 45115443 1 + G A BLCA 45115443 - 45115423 45115463 41 ATGATGCCGCGGCCATCCTTCACGCCAATGGTCTCCAGGAA ATGATGCCGCGGCCATCCTTTACGCCAATGGTCTCCAGGAA Direct Gain 0 0.955495186667936 0 0.99999988079071 prediction 0.910990373335873 Functional Gain - CCM2 ENSG00000136280 CDS Human protein_coding chr7:45115443 chr7:45115443 synonymous SNV . 0 21 hPsi_associated_SNPs_105015 0 0 0 0 0 Ribosome 0 0.4387185928111 0.99999976158142 0 hPsi_site_3975 iPseU_CNN:0.99999976158142;iRNA_PseU:0 3976 chr3 52551568 52551568 1 + C T SKCM 52551568 + 52551548 52551588 41 GATCAAGACTGGGGACAGGTCTCCTGCAGCTGCCGTGAGGG GATCAAGACTGGGGACAGGTTTCCTGCAGCTGCCGTGAGGG Direct Gain 0 0.955490166929217 0 0.988422274589539 prediction 0.910980333858435 Functional Gain - STAB1 ENSG00000010327 CDS Human protein_coding chr3:52551568 chr3:52551568 synonymous SNV . 0 21 hPsi_associated_SNPs_105016 0 0 0 0 2 cytosol 0 0.438718661600556 0.976844549179078 0 hPsi_site_3976 iPseU_CNN:0.976844549179078;iRNA_PseU:0 3977 chr12 80729917 80729917 1 + C A LUSC 80729917 - 80729897 80729937 41 AAGAAATGCAAACTTACAAGGACATTCCCACTCAGGGCAGC AAGAAATGCAAACTTACAAGTACATTCCCACTCAGGGCAGC Direct Gain 0 0.955487575194426 0 0.999986529350281 prediction 0.910975150388851 Functional Gain - OTOGL ENSG00000165899 CDS Human protein_coding chr12:80729917 chr12:80729917 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_105017 0 0 0 0 0 exosome 0 0.438720572776196 0.999973058700562 0 hPsi_site_3977 iPseU_CNN:0.999973058700562;iRNA_PseU:0 3978 chr22 45681940 45681940 1 + C T SARC 45681940 + 45681920 45681960 41 AGCAAAGAGGCCCTCACTGGCACCCACGAGGTCTACCTGTA AGCAAAGAGGCCCTCACTGGTACCCACGAGGTCTACCTGTA Direct Gain 0 0.955487361669577 0 0.990287661552429 prediction 0.910974723339155 Functional Gain - UPK3A ENSG00000100373 CDS Human protein_coding chr22:45681940 chr22:45681940 synonymous SNV . 0 21 hPsi_associated_SNPs_105018 0 0 0 0 1 exosome 0 0.438718596585461 0.980575323104858 0 hPsi_site_3978 iPseU_CNN:0.980575323104858;iRNA_PseU:0 3979 chr14 89034472 89034472 1 + A T OV 89034472 + 89034452 89034492 41 ATCTGTCCCTGTTTCTAGGGAACAACACAATTCGATTCACC ATCTGTCCCTGTTTCTAGGGTACAACACAATTCGATTCACC Direct Gain 0 0.955486590546583 0 0.99553906917572 prediction 0.910973181093167 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89034472 chr14:89034472 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105019 0 0 1 0 2 Nucleus 0 0.438718592899966 0.99107813835144 0 hPsi_site_3979 iPseU_CNN:0.99107813835144;iRNA_PseU:0 3980 chr11 59861451 59861451 1 + G T LIHC 59861451 + 59861431 59861471 41 CAATAGGAAATTGTAGTGATGATGCTGTTTCTCACCATTCT CAATAGGAAATTGTAGTGATTATGCTGTTTCTCACCATTCT Direct Gain 0 0.955471373509437 0 0.267284631729126 prediction 0.910942747018874 Functional Gain - MS4A2 ENSG00000149534 CDS Human protein_coding chr11:59861451 chr11:59861451 nonsynonymous SNV 0.719 0 21 hPsi_associated_SNPs_105020 0 0 0 0 2 exosome 0 0.431841531227825 0 0 hPsi_site_3980 iPseU_CNN:0;iRNA_PseU:0 3981 chr7 63726906 63726906 1 + G A SKCM 63726906 - 63726886 63726926 41 AAAGGCTTTGCCACATTCTTCACATGTGTATGGTTTCTCTC AAAGGCTTTGCCACATTCTTTACATGTGTATGGTTTCTCTC Direct Gain 0 0.9554699119862 0 0.999023199081421 prediction 0.910939823972401 Functional Gain - ZNF679 ENSG00000197123 CDS Human protein_coding chr7:63726906 chr7:63726906 nonsynonymous SNV 0.008 2 21 hPsi_associated_SNPs_105021 0 0 0 0 0 unknown 0 0.438921447157469 0.998046398162842 0 hPsi_site_3981 iPseU_CNN:0.998046398162842;iRNA_PseU:0 3982 chrX 153421840 153421840 1 + G A ESCA 153421840 - 153421820 153421860 41 ACGCAGTACGCAAAGATCATCACCACCACCATGCGCGTCAC ACGCAGTACGCAAAGATCATTACCACCACCATGCGCGTCAC Direct Gain 0 0.955468196297988 0 0.99967098236084 prediction 0.910936392595975 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153421840 chrX:153421840 synonymous SNV . 0 21 hPsi_associated_SNPs_105022 0 0 0 0 0 unknown 0 0.43938667626848 0.99934196472168 0 hPsi_site_3982 iPseU_CNN:0.99934196472168;iRNA_PseU:0 3983 chr11 6504639 6504639 1 + A T rs116189027 6504639 + 6504619 6504659 41 TTCAGCAGCCTGGATAGCATATCATTCCATCACCCCATTTT TTCAGCAGCCTGGATAGCATTTCATTCCATCACCCCATTTT Direct Gain 0 0.955468195569976 0 0.0153173506259918 prediction 0.910936391139952 Functional Gain - TIMM10B ENSG00000132286 UTR3 Human protein_coding chr11:6504639 chr11:6504639 . . 0 21 hPsi_associated_SNPs_105023 0 0 1 0 0 Ribosome 0 0.438718649162226 0 0 hPsi_site_3983 iPseU_CNN:0;iRNA_PseU:0 3984 chr11 33564300 33564300 1 + G A rs570056661 33564300 - 33564280 33564320 41 GGCAAAGACACCCCATTGTGCACTCTTCCAGGCACCCCAGC GGCAAAGACACCCCATTGTGTACTCTTCCAGGCACCCCAGC Direct Gain 0 0.955467196312363 0 0.988401532173157 prediction 0.910934392624725 Functional Gain - KIAA1549L ENSG00000110427 CDS Human protein_coding chr11:33564300 chr11:33564300 synonymous SNV . 0 21 hPsi_associated_SNPs_105024 0 0 0 0 0 exosome 0 0.438718592764744 0.976803064346314 0 hPsi_site_3984 iPseU_CNN:0.976803064346314;iRNA_PseU:0 3985 chr4 5053593 5053593 1 + G A ESCA 5053593 - 5053573 5053613 41 TTGTGGGAGTGGTTCCCGCCCATATTCCGCCGTTGCTGCCG TTGTGGGAGTGGTTCCCGCCTATATTCCGCCGTTGCTGCCG Direct Gain 0 0.955465446563206 0 0.999820113182068 prediction 0.910930893126412 Functional Gain - STK32B ENSG00000152953 CDS Human protein_coding chr4:5053593 chr4:5053593 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_105025 0 0 0 0 0 Nucleus 0 0.439081711816984 0.999640226364136 0 hPsi_site_3985 iPseU_CNN:0.999640226364136;iRNA_PseU:0 3986 chr10 125448841 125448841 1 + C T rs192389959 125448841 + 125448821 125448861 41 GCAATGGTGCGATCTAGGCTCACCACAACCTCTGCCTTCCA GCAATGGTGCGATCTAGGCTTACCACAACCTCTGCCTTCCA Direct Gain 0 0.955462190178647 0 0.996605157852173 prediction 0.910924380357294 Functional Gain - GPR26 ENSG00000154478 UTR3 Human protein_coding chr10:125448841 chr10:125448841 . . 0 21 hPsi_associated_SNPs_105026 0 0 0 0 0 exosome 0 0.438720342906398 0.993210315704346 0 hPsi_site_3986 iPseU_CNN:0.993210315704346;iRNA_PseU:0 3987 chr6 161508851 161508851 1 + C T LUAD 161508851 + 161508831 161508871 41 AAAGATTCAGATGACGTACTCATCGATGCCTATCTGCTTCT AAAGATTCAGATGACGTACTTATCGATGCCTATCTGCTTCT Direct Gain 0 0.955454264238078 0 0.915289103984833 prediction 0.910908528476156 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161508851 chr6:161508851 synonymous SNV . 0 21 hPsi_associated_SNPs_105027 0 0 1 0 0 Cytosol 0 0.438718596083723 0.830578207969666 0 hPsi_site_3987 iPseU_CNN:0.830578207969666;iRNA_PseU:0 3988 chr11 48285489 48285489 1 + C A COAD 48285489 - 48285469 48285509 41 ACATGAGGAGAAACATCACAGAAATGACCCTCTGCTCACTC ACATGAGGAGAAACATCACATAAATGACCCTCTGCTCACTC Direct Gain 0 0.955452634723666 0 0.997716426849365 prediction 0.910905269447331 Functional Gain - OR4X1 ENSG00000176567 CDS Human protein_coding chr11:48285489 chr11:48285489 nonsynonymous SNV 0.178 1 21 hPsi_associated_SNPs_105028 0 0 0 0 0 unknown 0 0.438686805229584 0.99543285369873 0 hPsi_site_3988 iPseU_CNN:0.99543285369873;iRNA_PseU:0 3989 chr3 134281726 134281726 1 + C T rs112084137 134281726 + 134281706 134281746 41 AGGGCCCCCTAGAGCTCTGTCATGGGTTTTCTCCCTCAGCA AGGGCCCCCTAGAGCTCTGTTATGGGTTTTCTCCCTCAGCA Direct Gain 0 0.9554443446121 0 0.972478806972504 prediction 0.9108886892242 Functional Gain - CEP63 ENSG00000182923 UTR3 Human protein_coding chr3:134281726 chr3:134281726 . . 0 21 hPsi_associated_SNPs_105029 0 0 0 0 0 nucleolus 0 0.438718592995154 0.944957613945008 0 hPsi_site_3989 iPseU_CNN:0.944957613945008;iRNA_PseU:0 3990 chr8 2033444 2033444 1 + C A HNSC 2033444 - 2033424 2033464 41 AGGACGACATAGTTTCTGCTGATCTCGGAAGCGTGCACACC AGGACGACATAGTTTCTGCTTATCTCGGAAGCGTGCACACC Direct Gain 0 0.955440570381541 0 0.999634146690369 prediction 0.910881140763082 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2033444 chr8:2033444 synonymous SNV . 0 21 hPsi_associated_SNPs_105030 0 0 0 0 0 exosome 0 0.438642564880051 0.999268293380738 0 hPsi_site_3990 iPseU_CNN:0.999268293380738;iRNA_PseU:0 3991 chr17 7804681 7804681 1 + C T LUSC 7804681 + 7804661 7804701 41 GAGCAAGGACACCGAGTGCTCATCTTCTCGCAGGTGACCTG GAGCAAGGACACCGAGTGCTTATCTTCTCGCAGGTGACCTG Direct Gain 0 0.955436903718348 0 0.747721970081329 prediction 0.910873807436695 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7804681 chr17:7804681 synonymous SNV . 0 21 hPsi_associated_SNPs_105031 0 0 1 0 1 Cytosol 0 0.435021839245322 0.495443940162658 0 hPsi_site_3991 iPseU_CNN:0.495443940162658;iRNA_PseU:0 3992 chr8 77776581 77776581 1 + C T UCEC 77776581 + 77776561 77776601 41 AGCTGCTTCTCCCCCTTCTTCTCCTCCTTCCCTTTCCTTGC AGCTGCTTCTCCCCCTTCTTTTCCTCCTTCCCTTTCCTTGC Direct Gain 0 0.955434240015233 0 0.938122749328613 prediction 0.910868480030465 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77776581 chr8:77776581 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105032 0 0 1 0 0 Ribosome 0 0.438718592927668 0.876245498657226 0 hPsi_site_3992 iPseU_CNN:0.876245498657226;iRNA_PseU:0 3993 chr3 50148120 50148120 1 + G A COAD 50148120 - 50148100 50148140 41 ATACTGGTAAGTGGACGTGTCAGGTACTGCTGCAAAAACAA ATACTGGTAAGTGGACGTGTTAGGTACTGCTGCAAAAACAA Direct Gain 0 0.955431730526976 0 0.395260632038116 prediction 0.910863461053952 Functional Gain - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50148120 chr3:50148120 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105033 0 0 0 0 0 Cytosol 0 0.438660574203367 0 0 hPsi_site_3993 iPseU_CNN:0;iRNA_PseU:0 3994 chr12 97078996 97078996 1 + C T SKCM 97078996 + 97078976 97079016 41 GGGTGTTTGCAAGGAGCAGTCATATCAGCAAAGATAGCACA GGGTGTTTGCAAGGAGCAGTTATATCAGCAAAGATAGCACA Direct Gain 0 0.955430124595568 0 0.397331684827805 prediction 0.910860249191137 Functional Gain - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:97078996 chr12:97078996 synonymous SNV . 0 21 hPsi_associated_SNPs_105034 0 0 0 0 1 exosome 0 0.438729678912092 0 0 hPsi_site_3994 iPseU_CNN:0;iRNA_PseU:0 3995 chr2 56611422 56611422 1 + G T LGG 56611422 + 56611402 56611442 41 TTGTGTGGAGGAAACTTGGAGATGCTGCAGGTTCGTGTCCT TTGTGTGGAGGAAACTTGGATATGCTGCAGGTTCGTGTCCT Direct Gain 0 0.955418702645371 0 0.999473333358765 prediction 0.910837405290741 Functional Gain - CCDC85A ENSG00000055813 CDS Human protein_coding chr2:56611422 chr2:56611422 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105035 0 0 0 0 1 exosome 0 0.438718469283562 0.99894666671753 0 hPsi_site_3995 iPseU_CNN:0.99894666671753;iRNA_PseU:0 3996 chr22 39414710 39414710 1 + C T rs144230202 39414710 + 39414690 39414730 41 TAAACTCATCCTAGGCTGGGCATGGTGACTCACGCCTGTAA TAAACTCATCCTAGGCTGGGTATGGTGACTCACGCCTGTAA Direct Gain 0 0.955417897010959 0 0.301516473293304 prediction 0.910835794021918 Functional Gain - APOBEC3C ENSG00000244509 UTR3 Human protein_coding chr22:39414710 chr22:39414710 . . 0 21 hPsi_associated_SNPs_105036 0 0 1 0 0 exosome 0 0.438718615229242 0 0 hPsi_site_3996 iPseU_CNN:0;iRNA_PseU:0 3997 chr10 72506193 72506193 1 + G A rs189096829 72506193 - 72506173 72506213 41 ACCTGATACCCATTAGCCGTCATGCCTCTTTCCTTCCCCAG ACCTGATACCCATTAGCCGTTATGCCTCTTTCCTTCCCCAG Direct Gain 0 0.955415199636421 0 0.930798649787903 prediction 0.910830399272841 Functional Gain - ADAMTS14 ENSG00000138316 intronic Human protein_coding chr10:72506193 chr10:72506193 . . 0 21 hPsi_associated_SNPs_105037 0 0 0 0 0 chromatin 0 0.438712098719489 0.861597299575806 0 hPsi_site_3997 iPseU_CNN:0.861597299575806;iRNA_PseU:0 3998 chr22 24659712 24659712 1 + C T rs534872323 24659712 + 24659692 24659732 41 CACTGGCGCACGATGTAGGGCACCTTGGACCTCTCTCTCCT CACTGGCGCACGATGTAGGGTACCTTGGACCTCTCTCTCCT Direct Gain 0 0.955415096558906 0 0.999596416950226 prediction 0.910830193117812 Functional Gain - POM121L9P ENSG00000128262;ENSG00000225098 ncRNA_exonic Human other chr22:24659712 chr22:24659712 . . 0 21 hPsi_associated_SNPs_105038 0 0 0 0 0 unknown 0 0.441944312667888 0.999192833900452 0 hPsi_site_3998 iPseU_CNN:0.999192833900452;iRNA_PseU:0 3999 chr13 114290417 114290417 1 + C T SKCM 114290417 + 114290397 114290437 41 AACACCAGCAAGAAGACGGTCATCGACTGCAGCATCTCCAA AACACCAGCAAGAAGACGGTTATCGACTGCAGCATCTCCAA Direct Gain 0 0.955410387805373 0 0.999998807907104 prediction 0.910820775610746 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290417 chr13:114290417 synonymous SNV . 0 21 hPsi_associated_SNPs_105039 0 0 1 0 1 Cytosol 0 0.43819652495387 0.999997615814208 0 hPsi_site_3999 iPseU_CNN:0.999997615814208;iRNA_PseU:0 4000 chr11 121416106 121416106 1 + C T rs12280714 121416106 + 121416086 121416126 41 GACAGGCCGGTGGTCGTGTCCAACTGCTCCTGCACCCGGGA GACAGGCCGGTGGTCGTGTCTAACTGCTCCTGCACCCGGGA Direct Gain 0 0.955406277589156 0 0.364333689212799 prediction 0.910812555178312 Functional Gain - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121416106 chr11:121416106 synonymous SNV . 0 21 hPsi_associated_SNPs_105040 0 0 1 0 1 Nucleus 0 0.438714498320335 0 0 hPsi_site_4000 iPseU_CNN:0;iRNA_PseU:0 4001 chr9 36211679 36211679 1 + G A LUSC 36211679 - 36211659 36211699 41 GCTAGACTTGGGGTTAAAGTCACACAGCCGGGCCACCCGTT GCTAGACTTGGGGTTAAAGTTACACAGCCGGGCCACCCGTT Direct Gain 0 0.955405755088718 0 0.999875128269196 prediction 0.910811510177436 Functional Gain - CLTA ENSG00000122705 CDS Human protein_coding chr9:36211679 chr9:36211679 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105041 0 0 0 0 0 Ribosome 0 0.438718592998499 0.999750256538392 0 hPsi_site_4001 iPseU_CNN:0.999750256538392;iRNA_PseU:0 4002 chr1 47614425 47614425 1 + C T rs61736430 47614425 + 47614405 47614445 41 AAAATGGAATCCACCTGCGTCTCAGGAGGCTCCCTAACCCT AAAATGGAATCCACCTGCGTTTCAGGAGGCTCCCTAACCCT Direct Gain 0 0.955402200015049 0 0.0050109326839447 prediction 0.910804400030098 Functional Gain - CYP4A22 ENSG00000162365 CDS Human protein_coding chr1:47614425 chr1:47614425 nonsynonymous SNV 0.023 4 21 hPsi_associated_SNPs_105042 0 0 0 0 0 exosome 0 0.438718632440235 0 0 hPsi_site_4002 iPseU_CNN:0;iRNA_PseU:0 4003 chrX 144905297 144905297 1 + C A BLCA 144905297 - 144905277 144905317 41 GACATTATACTCTAAATAGAGATATTGCAAGCTCTGCAGTC GACATTATACTCTAAATAGATATATTGCAAGCTCTGCAGTC Direct Gain 0 0.955399136288967 0 0.0543268918991089 prediction 0.910798272577934 Functional Gain - SLITRK2 ENSG00000185985 CDS Human protein_coding chrX:144905297 chrX:144905297 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105043 0 0 0 0 0 Cytosol 0 0.438649035072976 0 0 hPsi_site_4003 iPseU_CNN:0;iRNA_PseU:0 4004 chr11 862714 862714 1 + C A rs142273247 862714 - 862694 862734 41 AGGAGGCACTTGTTCTCCTTGATGGCACCCAGGCAGCCCAC AGGAGGCACTTGTTCTCCTTTATGGCACCCAGGCAGCCCAC Direct Gain 0 0.955396368701434 0 0.956248879432678 prediction 0.910792737402867 Functional Gain - TSPAN4 ENSG00000214063 CDS Human protein_coding chr11:862714 chr11:862714 synonymous SNV . 0 21 hPsi_associated_SNPs_105044 0 0 0 0 0 Ribosome 0 0.438714047342607 0.912497758865356 0 hPsi_site_4004 iPseU_CNN:0.912497758865356;iRNA_PseU:0 4005 chr6 129419352 129419352 1 + C T UCEC 129419352 + 129419332 129419372 41 GTATGTGATTGTGAAGGCAGCTAACTCCCCCCGGCCTGGAA GTATGTGATTGTGAAGGCAGTTAACTCCCCCCGGCCTGGAA Direct Gain 0 0.955395506615638 0 0.998209714889526 prediction 0.910791013231275 Functional Gain - LAMA2 ENSG00000196569 CDS Human protein_coding chr6:129419352 chr6:129419352 nonsynonymous SNV 0.981 2 21 hPsi_associated_SNPs_105045 0 0 0 0 1 cytosol 0 0.438706046502197 0.996419429779052 0 hPsi_site_4005 iPseU_CNN:0.996419429779052;iRNA_PseU:0 4006 chr16 83817034 83817034 1 + C T CESC 83817034 + 83817014 83817054 41 GCGGCAGGGGCCCTGCGCTTCAGCCTGCCCTCAGTCCTGCT GCGGCAGGGGCCCTGCGCTTTAGCCTGCCCTCAGTCCTGCT Direct Gain 0 0.955393130126533 0 0.999743521213531 prediction 0.910786260253066 Functional Gain - CDH13 ENSG00000140945 CDS Human protein_coding chr16:83817034 chr16:83817034 synonymous SNV . 0 21 hPsi_associated_SNPs_105046 0 0 0 0 1 Nucleus 0 0.438718991273826 0.999487042427062 0 hPsi_site_4006 iPseU_CNN:0.999487042427062;iRNA_PseU:0 4007 chr19 54943383 54943383 1 + G A rs143605423 54943383 - 54943363 54943403 41 GTTTGTGACAGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTG GTTTGTGACAGAGTTTCGCTTTTGTTGCCCAGGCTGGAGTG Direct Gain 0 0.955389838874122 0 0.0251064300537109 prediction 0.910779677748244 Functional Gain - TTYH1 ENSG00000227407 ncRNA_intronic Human antisense chr19:54943383 chr19:54943383 . . 0 21 hPsi_associated_SNPs_105047 0 0 1 0 0 cytosol 0 0.43873978035214 0 0 hPsi_site_4007 iPseU_CNN:0;iRNA_PseU:0 4008 chr9 84531000 84531000 1 + G T COAD 84531000 + 84530980 84531020 41 GTATTGAAGCCTTTTCCGGAGATGTTATCTCTAGGTAGTTC GTATTGAAGCCTTTTCCGGATATGTTATCTCTAGGTAGTTC Direct Gain 0 0.955389558651766 0 0.914544939994812 prediction 0.910779117303532 Functional Gain - SPATA31D5P ENSG00000240632 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:84531000 chr9:84531000 . . 0 21 hPsi_associated_SNPs_105048 0 0 0 0 0 unknown 0 0.438702424587321 0.829089879989624 0 hPsi_site_4008 iPseU_CNN:0.829089879989624;iRNA_PseU:0 4009 chr1 36767183 36767183 1 + C T ACC 36767183 + 36767163 36767203 41 GCCAGAGGAAGAGGCTGGGGCAGAGGCAACTACTCTGGGAA GCCAGAGGAAGAGGCTGGGGTAGAGGCAACTACTCTGGGAA Direct Gain 0 0.955388168003579 0 0.993746638298035 prediction 0.910776336007158 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36767183 chr1:36767183 synonymous SNV . 0 21 hPsi_associated_SNPs_105049 0 0 1 0 1 Nucleus 0 0.438718592986951 0.98749327659607 0 hPsi_site_4009 iPseU_CNN:0.98749327659607;iRNA_PseU:0 4010 chr22 31491427 31491427 1 + G A BLCA 31491427 - 31491407 31491447 41 CTATACCATCTTGTCCAAGACTCCTTCATCCTCAATAGTCA CTATACCATCTTGTCCAAGATTCCTTCATCCTCAATAGTCA Direct Gain 0 0.955388122059632 0 0.997395694255829 prediction 0.910776244119263 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31491427 chr22:31491427 nonsynonymous SNV 0.836 0 21 hPsi_associated_SNPs_105050 0 0 0 0 0 Cytosol 0 0.438720309929035 0.994791388511658 0 hPsi_site_4010 iPseU_CNN:0.994791388511658;iRNA_PseU:0 4011 chr2 65455000 65455000 1 + G A BRCA 65455000 - 65454980 65455020 41 GCAGCCGCACAACCTACAGCCACCGCCGCCCGGCCGTTTTC GCAGCCGCACAACCTACAGCTACCGCCGCCCGGCCGTTTTC Direct Gain 0 0.955386650671749 0 0.998446941375732 prediction 0.910773301343498 Functional Gain - ACTR2 ENSG00000138071 UTR5 Human protein_coding chr2:65455000 chr2:65455000 . . 0 21 hPsi_associated_SNPs_105051 0 0 0 0 0 Ribosome 0 0.438718673737008 0.996893882751464 0 hPsi_site_4011 iPseU_CNN:0.996893882751464;iRNA_PseU:0 4012 chr12 13066037 13066037 1 + C T rs115287864 13066037 + 13066017 13066057 41 TCACAGTGGGTTTTGTGAGGCTCTGTGGCCCAGAGCAGACC TCACAGTGGGTTTTGTGAGGTTCTGTGGCCCAGAGCAGACC Direct Gain 0 0.955385365681037 0 0.796030879020691 prediction 0.910770731362075 Functional Gain - GPRC5A ENSG00000013588 UTR3 Human protein_coding chr12:13066037 chr12:13066037 . . 0 21 hPsi_associated_SNPs_105052 0 0 1 0 0 Nucleus 0 0.438718592994248 0.592061758041382 0 hPsi_site_4012 iPseU_CNN:0.592061758041382;iRNA_PseU:0 4013 chr11 12315279 12315279 1 + G T COAD 12315279 + 12315259 12315299 41 GCCTGGTGAGCCCTGGTGAAGATGGCCTCTCAGACCCTGCA GCCTGGTGAGCCCTGGTGAATATGGCCTCTCAGACCCTGCA Direct Gain 0 0.955383993859461 0 0.270228952169418 prediction 0.910767987718921 Functional Gain - MICALCL ENSG00000133808 CDS Human protein_coding chr11:12315279 chr11:12315279 nonsynonymous SNV 0.010 2 21 hPsi_associated_SNPs_105053 0 0 0 0 0 exosome 0 0.438718592979639 0 0 hPsi_site_4013 iPseU_CNN:0;iRNA_PseU:0 4014 chr1 202287438 202287438 1 + C T SKCM 202287438 + 202287418 202287458 41 GCCGCAGTGCAGTGCAGCGTCTCCGTCTCCTGTGTCCGGGC GCCGCAGTGCAGTGCAGCGTTTCCGTCTCCTGTGTCCGGGC Direct Gain 0 0.955376853982216 0 0.999024868011475 prediction 0.910753707964433 Functional Gain - LGR6 ENSG00000133067 CDS Human protein_coding chr1:202287438 chr1:202287438 synonymous SNV . 0 21 hPsi_associated_SNPs_105054 0 0 0 0 0 nucleoplasm 0 0.438607475833157 0.99804973602295 0 hPsi_site_4014 iPseU_CNN:0.99804973602295;iRNA_PseU:0 4015 chr3 184044703 184044703 1 + G A BLCA 184044703 - 184044683 184044723 41 TGAAGGGCTGAGAAGCGATTCAAAGTACTAGTAGCTGGGCG TGAAGGGCTGAGAAGCGATTTAAAGTACTAGTAGCTGGGCG Direct Gain 0 0.955369090352028 0 0.999488413333893 prediction 0.910738180704055 Functional Gain - EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184044703 chr3:184044703 synonymous SNV . 0 21 hPsi_associated_SNPs_105055 0 0 0 0 0 Nucleus 0 0.438718303020434 0.998976826667786 0 hPsi_site_4015 iPseU_CNN:0.998976826667786;iRNA_PseU:0 4016 chr18 42529998 42529998 1 + C A LUAD 42529998 - 42529978 42530018 41 CTGATGAAGCAATTCTGAGTGACGGGTCCGCTGTCAGAGTT CTGATGAAGCAATTCTGAGTTACGGGTCCGCTGTCAGAGTT Direct Gain 0 0.955368677786541 0 0.999319553375244 prediction 0.910737355573082 Functional Gain - SETBP1 ENSG00000152217 CDS Human protein_coding chr18:42529998 chr18:42529998 synonymous SNV . 0 21 hPsi_associated_SNPs_105056 0 0 0 0 0 nucleus 0 0.438718261328734 0.998639106750488 0 hPsi_site_4016 iPseU_CNN:0.998639106750488;iRNA_PseU:0 4017 chrX 119007294 119007294 1 + C A CESC 119007294 - 119007274 119007314 41 TCTTTCCATCAGACTCCAGTGATACCCAAAATGAGCAACCC TCTTTCCATCAGACTCCAGTTATACCCAAAATGAGCAACCC Direct Gain 0 0.955363103137923 0 0.912199854850769 prediction 0.910726206275845 Functional Gain - NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007294 chrX:119007294 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_105057 0 0 0 0 0 Ribosome 0 0.438720007216703 0.824399709701538 0 hPsi_site_4017 iPseU_CNN:0.824399709701538;iRNA_PseU:0 4018 chr19 44680679 44680679 1 + G A CESC 44680679 - 44680659 44680699 41 GAAGCCCTTACCACACTCCTCACATTTGTATGGTTTCTCTC GAAGCCCTTACCACACTCCTTACATTTGTATGGTTTCTCTC Direct Gain 0 0.955361490091112 0 0.999913692474365 prediction 0.910722980182224 Functional Gain - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680679 chr19:44680679 nonsynonymous SNV 0.984 0 21 hPsi_associated_SNPs_105058 0 0 0 0 0 Cytosol 0 0.438701294416354 0.99982738494873 0 hPsi_site_4018 iPseU_CNN:0.99982738494873;iRNA_PseU:0 4019 chr3 49701941 49701941 1 + G T UCEC 49701941 + 49701921 49701961 41 GGGGAGAGCGTGTTCTCCAAGATCCTCCCTGGCGGGGCAGC GGGGAGAGCGTGTTCTCCAATATCCTCCCTGGCGGGGCAGC Direct Gain 0 0.955358039519129 0 0.680857479572296 prediction 0.910716079038258 Functional Gain - BSN ENSG00000164061 CDS Human protein_coding chr3:49701941 chr3:49701941 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_105059 0 0 0 0 2 chromatin 0 0.438718593232783 0.361714959144592 0 hPsi_site_4019 iPseU_CNN:0.361714959144592;iRNA_PseU:0 4020 chr6 31913054 31913054 1 + G A STAD 31913054 - 31913034 31913074 41 GAAGAGATTGATGTGAAAGTCTCGTGGCGGCGGGACCTTGC GAAGAGATTGATGTGAAAGTTTCGTGGCGGCGGGACCTTGC Direct Gain 0 0.955356176639962 0 0.327584087848663 prediction 0.910712353279924 Functional Gain - C2 ENSG00000166278 CDS Human protein_coding chr6:31913054 chr6:31913054 nonsynonymous SNV 0.571 4 21 hPsi_associated_SNPs_105060 0 0 0 0 0 Endoplasmic reticulum 0 0.438117619270857 0 0 hPsi_site_4020 iPseU_CNN:0;iRNA_PseU:0 4021 chr1 12009946 12009946 1 + C T BLCA 12009946 + 12009926 12009966 41 GCAGACAAGGAGGATCTGGTCATTCTCTTCGCAGACAGGTA GCAGACAAGGAGGATCTGGTTATTCTCTTCGCAGACAGGTA Direct Gain 0 0.955347134515707 0 0.999993205070496 prediction 0.910694269031414 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009946 chr1:12009946 synonymous SNV . 0 21 hPsi_associated_SNPs_105061 0 0 1 0 1 Nucleus 0 0.438719802901352 0.999986410140992 0 hPsi_site_4021 iPseU_CNN:0.999986410140992;iRNA_PseU:0 4022 chr22 41753371 41753371 1 + G T COAD 41753371 + 41753351 41753391 41 TCCTGCTGCAAGAGGACGGGGACCTTGCCGGTGCCACCCCA TCCTGCTGCAAGAGGACGGGTACCTTGCCGGTGCCACCCCA Direct Gain 0 0.955331952050599 0 0.999970674514771 prediction 0.910663904101197 Functional Gain - ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41753371 chr22:41753371 nonsynonymous SNV 0.036 1 21 hPsi_associated_SNPs_105062 0 0 1 0 0 Endoplasmic reticulum 0 0.43871331862722 0.999941349029542 0 hPsi_site_4022 iPseU_CNN:0.999941349029542;iRNA_PseU:0 4023 chr14 24523675 24523675 1 + C A SKCM 24523675 - 24523655 24523695 41 GGGCAGAGCTCACATGTCGTGTCACCTGGTCCACACTTTCA GGGCAGAGCTCACATGTCGTTTCACCTGGTCCACACTTTCA Direct Gain 0 0.955331652114053 0 0.86216413974762 prediction 0.910663304228106 Functional Gain - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24523675 chr14:24523675 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_105063 0 0 0 0 0 Endoplasmic reticulum 0 0.438632695620019 0.72432827949524 0 hPsi_site_4023 iPseU_CNN:0.72432827949524;iRNA_PseU:0 4024 chr10 14896200 14896200 1 + T A KIRP 14896200 - 14896180 14896220 41 ACTTCCCAAGGTTGACAAAGAATGTTTCGCTACTTCAGCAC ACTTCCCAAGGTTGACAAAGTATGTTTCGCTACTTCAGCAC Direct Gain 0 0.955327420523009 0 0.91257107257843 prediction 0.910654841046018 Functional Gain - HSPA14 ENSG00000187522 CDS Human protein_coding chr10:14896200 chr10:14896200 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105064 0 0 0 0 0 Cytosol 0 0.439410026159272 0.82514214515686 0 hPsi_site_4024 iPseU_CNN:0.82514214515686;iRNA_PseU:0 4025 chr19 55263855 55263855 1 + G A rs4020187 55263855 - 55263835 55263875 41 AACGCAGTGATTCAACTGTGCATATGTCACCTCCTGAGGGT AACGCAGTGATTCAACTGTGTATATGTCACCTCCTGAGGGT Direct Gain 0 0.955326815853844 0 0.919891834259033 prediction 0.910653631707688 Functional Gain - KIR2DL3 ENSG00000243772 CDS Human protein_coding chr19:55263855 chr19:55263855 nonsynonymous SNV 0.003 2 21 hPsi_associated_SNPs_105065 0 0 0 0 0 exosome 0 0.437782227613398 0.839783668518066 0 hPsi_site_4025 iPseU_CNN:0.839783668518066;iRNA_PseU:0 4026 chr12 49951431 49951431 1 + C T LUSC 49951431 + 49951411 49951451 41 CCTGGGGTCCCCCAGCGTCTCAGAGCTCCCCCTGGCCTCGA CCTGGGGTCCCCCAGCGTCTTAGAGCTCCCCCTGGCCTCGA Direct Gain 0 0.955324848284654 0 0.94926643371582 prediction 0.910649696569309 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49951431 chr12:49951431 stopgain 1.000 0 21 hPsi_associated_SNPs_105066 0 0 0 0 0 chromatin 0 0.438718594108438 0.89853286743164 0 hPsi_site_4026 iPseU_CNN:0.89853286743164;iRNA_PseU:0 4027 chr12 40629491 40629491 1 + G A BLCA 40629491 - 40629471 40629511 41 GTTAGGAGGAGATCTAAGGTCTTCAGTCCAATCACTGACAA GTTAGGAGGAGATCTAAGGTTTTCAGTCCAATCACTGACAA Direct Gain 0 0.955324442113407 0 0.349990785121918 prediction 0.910648884226813 Functional Gain - LRRK2 ENSG00000188906 CDS Human protein_coding chr12:40629491 chr12:40629491 synonymous SNV . 0 21 hPsi_associated_SNPs_105067 0 0 0 0 0 exosome 0 0.438718591292557 0 0 hPsi_site_4027 iPseU_CNN:0;iRNA_PseU:0 4028 chr18 50985744 50985744 1 + C A UCEC 50985744 - 50985724 50985764 41 GTCTTGGCAACTTTGGATGGGAGAGTCCCTTCCTGCAGGGT GTCTTGGCAACTTTGGATGGTAGAGTCCCTTCCTGCAGGGT Direct Gain 0 0.955323655750414 0 0.98595142364502 prediction 0.910647311500829 Functional Gain - DCC ENSG00000187323 CDS Human protein_coding chr18:50985744 chr18:50985744 nonsynonymous SNV 0.993 4 21 hPsi_associated_SNPs_105068 0 0 0 0 0 exosome 0 0.438718594626341 0.97190284729004 0 hPsi_site_4028 iPseU_CNN:0.97190284729004;iRNA_PseU:0 4029 chr17 20640235 20640235 1 + G T rs112668492 20640235 + 20640215 20640255 41 TTCTCCTGGGGATTTCTGGGGAAGAGGCGCTTCGGCCAGCA TTCTCCTGGGGATTTCTGGGTAAGAGGCGCTTCGGCCAGCA Direct Gain 0 0.955323144204381 0 0.999907612800598 prediction 0.910646288408762 Functional Gain - LOC100287072 ENSG00000226521 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:20640235 chr17:20640235 . . 0 21 hPsi_associated_SNPs_105069 0 0 0 0 1 unknown 0 0.438718592435933 0.999815225601196 0 hPsi_site_4029 iPseU_CNN:0.999815225601196;iRNA_PseU:0 4030 chr8 72967823 72967823 1 + G T HNSC 72967823 + 72967803 72967843 41 AGGAGCCTCTGACAGGTATTGATACGCCCATAACTTGGAAA AGGAGCCTCTGACAGGTATTTATACGCCCATAACTTGGAAA Direct Gain 0 0.955322059194433 0 0.984849214553833 prediction 0.910644118388865 Functional Gain - TRPA1 ENSG00000104321 CDS Human protein_coding chr8:72967823 chr8:72967823 synonymous SNV . 0 21 hPsi_associated_SNPs_105070 0 0 0 0 0 chromatin 0 0.438719706627102 0.969698429107666 0 hPsi_site_4030 iPseU_CNN:0.969698429107666;iRNA_PseU:0 4031 chr9 90387871 90387871 1 + G T COAD 90387871 + 90387851 90387891 41 AATCAGGAATACAGGGAAGGGAAACACAGCTTCACAATGGC AATCAGGAATACAGGGAAGGTAAACACAGCTTCACAATGGC Direct Gain 0 0.955315833585051 0 0.285184949636459 prediction 0.910631667170102 Functional Gain - CTSL3P ENSG00000188029 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:90387871 chr9:90387871 . . 0 21 hPsi_associated_SNPs_105071 0 0 0 0 1 unknown 0 0.438718638730528 0 0 hPsi_site_4031 iPseU_CNN:0;iRNA_PseU:0 4032 chr11 67222868 67222868 1 + G A rs192302421 67222868 - 67222848 67222888 41 GGGATAACAGGGCTCAGAGACACCACACCCCTGGGCACCCT GGGATAACAGGGCTCAGAGATACCACACCCCTGGGCACCCT Direct Gain 0 0.955314295629288 0 0.999992966651917 prediction 0.910628591258576 Functional Gain - CABP4 ENSG00000175544 UTR5 Human protein_coding chr11:67222868 chr11:67222868 . . 0 21 hPsi_associated_SNPs_105072 1 0 0 0 0 exosome 0 0.438718592995076 0.999985933303834 0 hPsi_site_4032 iPseU_CNN:0.999985933303834;iRNA_PseU:0 4033 chr12 100594414 100594414 1 + C T rs140689844 100594414 + 100594394 100594434 41 GCGAGAAAGCACATAGTAGTCAAATCTCGCCACCACATAAA GCGAGAAAGCACATAGTAGTTAAATCTCGCCACCACATAAA Direct Gain 0 0.955313455177186 0 0.999362111091614 prediction 0.910626910354372 Functional Gain - ACTR6 ENSG00000075089 UTR5 Human protein_coding chr12:100594414 chr12:100594414 . . 0 21 hPsi_associated_SNPs_105073 0 0 0 0 0 Ribosome 0 0.448318014688661 0.998724222183228 0 hPsi_site_4033 iPseU_CNN:0.998724222183228;iRNA_PseU:0 4034 chr8 133975283 133975283 1 + G A rs2069561 133975283 - 133975263 133975303 41 TGCTGGCCTTGGCACTGTGTCTTTTCTACATCCCATAGACT TGCTGGCCTTGGCACTGTGTTTTTTCTACATCCCATAGACT Direct Gain 0 0.95530701484414 0 0.964027166366577 prediction 0.910614029688281 Functional Gain - TG ENSG00000042832 CDS Human protein_coding chr8:133975283 chr8:133975283 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105074 2 0 0 0 0 Nucleus 0 0.43871859059134 0.928054332733154 0 hPsi_site_4034 iPseU_CNN:0.928054332733154;iRNA_PseU:0 4035 chrX 152140702 152140702 1 + A T rs140582632 152140702 + 152140682 152140722 41 GTAATGGCATTAATCCCCATAATAATCCTGTGAAGGTGATA GTAATGGCATTAATCCCCATTATAATCCTGTGAAGGTGATA Direct Gain 0 0.955302801213971 0 0.944396495819092 prediction 0.910605602427943 Functional Gain - ZNF185 ENSG00000147394 UTR3 Human protein_coding chrX:152140702 chrX:152140702 . . 0 21 hPsi_associated_SNPs_105075 0 0 1 0 0 chromatin 0 0.43877061096307 0.888792991638184 0 hPsi_site_4035 iPseU_CNN:0.888792991638184;iRNA_PseU:0 4036 chr2 70015206 70015206 1 + C T BLCA 70015206 + 70015186 70015226 41 GCAACCAAAGGAGGTACTGTCAAAGCTGCTTCAGGATTCAA GCAACCAAAGGAGGTACTGTTAAAGCTGCTTCAGGATTCAA Direct Gain 0 0.955297114705387 0 0.999594688415527 prediction 0.910594229410775 Functional Gain - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70015206 chr2:70015206 synonymous SNV . 0 21 hPsi_associated_SNPs_105076 0 0 1 1 2 Cytosol 0 0.438747499333434 0.999189376831054 0 hPsi_site_4036 iPseU_CNN:0.999189376831054;iRNA_PseU:0 4037 chr1 155291680 155291680 1 + C T UCEC 155291680 + 155291660 155291700 41 ACAGGAGGGGCCTTTGAGCACACCCCCTCCTCCAGGAGACA ACAGGAGGGGCCTTTGAGCATACCCCCTCCTCCAGGAGACA Direct Gain 0 0.95529017216238 0 0.110190510749817 prediction 0.91058034432476 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155291680 chr1:155291680 nonsynonymous SNV 0.986 2 21 hPsi_associated_SNPs_105077 0 0 0 0 0 Cytosol 0 0.438718593002859 0 0 hPsi_site_4037 iPseU_CNN:0;iRNA_PseU:0 4038 chr17 7809236 7809236 1 + G A STAD 7809236 - 7809216 7809256 41 GTGAAGGCATCCTGTGGTGGCATCCCCCAGCGCATCACAGC GTGAAGGCATCCTGTGGTGGTATCCCCCAGCGCATCACAGC Direct Gain 0 0.955285008843017 0 0.973933339118958 prediction 0.910570017686035 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7809236 chr17:7809236 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_105078 0 0 0 0 0 Cytosol 0 0.438717057213425 0.947866678237916 0 hPsi_site_4038 iPseU_CNN:0.947866678237916;iRNA_PseU:0 4039 chr17 79202513 79202513 1 + C T rs78433640 79202513 + 79202493 79202533 41 GAGCCCTGAGATCGACATTTCTGAAGCCCTGCCACCTGCCA GAGCCCTGAGATCGACATTTTTGAAGCCCTGCCACCTGCCA Direct Gain 0 0.955284605497678 0 0.866469383239746 prediction 0.910569210995355 Functional Gain - LOC105371925 ENSG00000260005 ncRNA_exonic Human antisense chr17:79202513 chr17:79202513 . . 0 21 hPsi_associated_SNPs_105079 0 0 0 0 0 unknown 0 0.438680684175539 0.732938766479492 0 hPsi_site_4039 iPseU_CNN:0.732938766479492;iRNA_PseU:0 4040 chr2 84932829 84932829 1 + C T UCEC 84932829 + 84932809 84932849 41 GATTTGTACTCTCGAGTGGTCAAGGTCGTCGAACCAAAAAG GATTTGTACTCTCGAGTGGTTAAGGTCGTCGAACCAAAAAG Direct Gain 0 0.955284237792718 0 0.999993920326233 prediction 0.910568475585436 Functional Gain - DNAH6 ENSG00000115423 CDS Human protein_coding chr2:84932829 chr2:84932829 synonymous SNV . 0 21 hPsi_associated_SNPs_105080 0 0 0 0 1 Exosome 0 0.43872559017985 0.999987840652466 0 hPsi_site_4040 iPseU_CNN:0.999987840652466;iRNA_PseU:0 4041 chr6 4892439 4892439 1 + C A LIHC 4892439 - 4892419 4892459 41 GGGTGCCACTGTGTCCTCCTGACCCTGCTCGACGGGGTCCA GGGTGCCACTGTGTCCTCCTTACCCTGCTCGACGGGGTCCA Direct Gain 0 0.955283589031194 0 0.999885678291321 prediction 0.910567178062387 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892439 chr6:4892439 nonsynonymous SNV 0.851 0 21 hPsi_associated_SNPs_105081 0 0 0 0 0 Cytoplasm 0 0.438717360806202 0.999771356582642 0 hPsi_site_4041 iPseU_CNN:0.999771356582642;iRNA_PseU:0 4042 chr6 97562284 97562284 1 + G T UCEC 97562284 + 97562264 97562304 41 GGTTCTGCCTACAGTTGAGCGATATTGCCCCAAGAAGAACA GGTTCTGCCTACAGTTGAGCTATATTGCCCCAAGAAGAACA Direct Gain 0 0.955280750329517 0 0.0220577716827393 prediction 0.910561500659034 Functional Gain - KLHL32 ENSG00000186231 CDS Human protein_coding chr6:97562284 chr6:97562284 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_105082 0 0 0 0 0 chromatin 0 0.43871859289455 0 0 hPsi_site_4042 iPseU_CNN:0;iRNA_PseU:0 4043 chr1 152732438 152732438 1 + C T SKCM 152732438 + 152732418 152732458 41 CTACGTGCAGTGCGAAGCGTCACAACCTGTTCAGACTTGCT CTACGTGCAGTGCGAAGCGTTACAACCTGTTCAGACTTGCT Direct Gain 0 0.955279166786248 0 0.999918103218079 prediction 0.910558333572496 Functional Gain - KPRP ENSG00000203786 CDS Human protein_coding chr1:152732438 chr1:152732438 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_105083 0 0 0 0 0 exosome 0 0.438701657862294 0.999836206436158 0 hPsi_site_4043 iPseU_CNN:0.999836206436158;iRNA_PseU:0 4044 chr6 41303997 41303997 1 + G A SKCM 41303997 - 41303977 41304017 41 GTGAATCGAGAGGTCCAAGCCATCGTCCTGGGCTTGGAGCT GTGAATCGAGAGGTCCAAGCTATCGTCCTGGGCTTGGAGCT Direct Gain 0 0.955270850525004 0 0.94014447927475 prediction 0.910541701050008 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41303997 chr6:41303997 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105084 0 0 0 0 0 exosome 0 0.438718587299272 0.8802889585495 0 hPsi_site_4044 iPseU_CNN:0.8802889585495;iRNA_PseU:0 4045 chr2 216200794 216200794 1 + G A UCEC 216200794 - 216200774 216200814 41 GGAAAGTATTGTCAAGGCTTCTTCTTCATATCCTGGGGCAA GGAAAGTATTGTCAAGGCTTTTTCTTCATATCCTGGGGCAA Direct Gain 0 0.955267210629499 0 0.0400093495845795 prediction 0.910534421258997 Functional Gain - ATIC ENSG00000138363 CDS Human protein_coding chr2:216200794 chr2:216200794 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_105085 0 0 0 0 0 chromatin 0 0.438717977703271 0 0 hPsi_site_4045 iPseU_CNN:0;iRNA_PseU:0 4046 chr16 4431778 4431778 1 + C T LUSC 4431778 + 4431758 4431798 41 GCAGCTGCCCGCAACCCCTTCAACTGCGTGTGCCCCCTGAG GCAGCTGCCCGCAACCCCTTTAACTGCGTGTGCCCCCTGAG Direct Gain 0 0.955267042421972 0 0.998932600021362 prediction 0.910534084843945 Functional Gain - VASN ENSG00000168140 CDS Human protein_coding chr16:4431778 chr16:4431778 synonymous SNV . 0 21 hPsi_associated_SNPs_105086 0 0 1 0 0 nucleus 0 0.438718592995102 0.997865200042724 0 hPsi_site_4046 iPseU_CNN:0.997865200042724;iRNA_PseU:0 4047 chr2 113089829 113089829 1 + G A UCEC 113089829 - 113089809 113089849 41 GGGAACGTCCGCCTGTGGGTCAGCTGGCCCCTCAAGAGTGA GGGAACGTCCGCCTGTGGGTTAGCTGGCCCCTCAAGAGTGA Direct Gain 0 0.955262274228797 0 0.659357130527496 prediction 0.910524548457594 Functional Gain - ZC3H6 ENSG00000188177 CDS Human protein_coding chr2:113089829 chr2:113089829 nonsynonymous SNV 0.476 1 21 hPsi_associated_SNPs_105087 0 0 0 0 0 Cytosol 0 0.438718581560663 0.318714261054992 0 hPsi_site_4047 iPseU_CNN:0.318714261054992;iRNA_PseU:0 4048 chr14 77332334 77332334 1 + C T SKCM 77332334 + 77332314 77332354 41 TATGCAGACCAACACAAAATCACGATCGTGGACTTCTTCAA TATGCAGACCAACACAAAATTACGATCGTGGACTTCTTCAA Direct Gain 0 0.955261384936109 0 0.999853491783142 prediction 0.910522769872217 Functional Gain - LRRC74A ENSG00000100565 CDS Human protein_coding chr14:77332334 chr14:77332334 synonymous SNV . 0 21 hPsi_associated_SNPs_105088 0 0 0 0 2 exosome 0 0.437711622944728 0.999706983566284 0 hPsi_site_4048 iPseU_CNN:0.999706983566284;iRNA_PseU:0 4049 chr10 135012583 135012583 1 + C A rs111276772 135012583 - 135012563 135012603 41 GGGACACTGTCTGGACTCTGGTCATCACGTTCCCCGGCAGG GGGACACTGTCTGGACTCTGTTCATCACGTTCCCCGGCAGG Direct Gain 0 0.955254653283345 0 0.978140592575073 prediction 0.91050930656669 Functional Gain - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135012583 chr10:135012583 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105089 0 0 0 0 0 Endoplasmic reticulum 0 0.438715719878063 0.956281185150146 0 hPsi_site_4049 iPseU_CNN:0.956281185150146;iRNA_PseU:0 4050 chr22 30415812 30415812 1 + C A UCEC 30415812 - 30415792 30415832 41 CCTGCTCTCCTTTTCTAAGAGAGGGTCCTCTTTACCCTCCT CCTGCTCTCCTTTTCTAAGATAGGGTCCTCTTTACCCTCCT Direct Gain 0 0.955250320411774 0 0.333883583545685 prediction 0.910500640823547 Functional Gain - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30415812 chr22:30415812 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_105090 0 0 0 0 0 Ribosome 0 0.438718592994638 0 0 hPsi_site_4050 iPseU_CNN:0;iRNA_PseU:0 4051 chr15 29398908 29398908 1 + G A UCEC 29398908 - 29398888 29398928 41 CGGGCAGCCGGGCCGCCATTCATCATGTTGGCCAGGATCAC CGGGCAGCCGGGCCGCCATTTATCATGTTGGCCAGGATCAC Direct Gain 0 0.955248554427261 0 0.999359905719757 prediction 0.910497108854522 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29398908 chr15:29398908 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_105091 0 0 0 0 0 Cytosol 0 0.438723849550094 0.998719811439514 0 hPsi_site_4051 iPseU_CNN:0.998719811439514;iRNA_PseU:0 4052 chr1 15546198 15546198 1 + G A CESC 15546198 - 15546178 15546218 41 GGGGGCCTTCTCCTGGACTTCATCATACTGCGGTGGAGGAG GGGGGCCTTCTCCTGGACTTTATCATACTGCGGTGGAGGAG Direct Gain 0 0.955238673481327 0 0.426013261079788 prediction 0.910477346962655 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15546198 chr1:15546198 nonsynonymous SNV 0.128 2 21 hPsi_associated_SNPs_105092 0 0 0 0 0 cytosol 0 0.438718616065657 0 0 hPsi_site_4052 iPseU_CNN:0;iRNA_PseU:0 4053 chr7 149515810 149515810 1 + G A LUSC 149515810 - 149515790 149515830 41 AGAGGCGGGTGCGGCTGCGCCATGCAGGGCGAGCGGGGTCC AGAGGCGGGTGCGGCTGCGCTATGCAGGGCGAGCGGGGTCC Direct Gain 0 0.955237978659581 0 0.0958546698093414 prediction 0.910475957319163 Functional Gain - SSPO ENSG00000197558 ncRNA_exonic Human protein_coding chr7:149515810 chr7:149515810 . 0.954 0 21 hPsi_associated_SNPs_105093 0 0 0 0 0 chromatin 0 0.438480378950485 0 0 hPsi_site_4053 iPseU_CNN:0;iRNA_PseU:0 4054 chr2 27449820 27449820 1 + G A BRCA 27449820 - 27449800 27449840 41 TGAGTCTCACCAACGCTCTTCATGCAGCTCCCAATCTTTGT TGAGTCTCACCAACGCTCTTTATGCAGCTCCCAATCTTTGT Direct Gain 0 0.955225980441172 0 0.958343863487244 prediction 0.910451960882344 Functional Gain - CAD ENSG00000084774 CDS Human protein_coding chr2:27449820 chr2:27449820 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105094 0 0 0 0 0 Exosome 0 0.438639640010504 0.916687726974488 0 hPsi_site_4054 iPseU_CNN:0.916687726974488;iRNA_PseU:0 4055 chr4 8228895 8228895 1 + G A STAD 8228895 - 8228875 8228915 41 GGCCTCTGGGTCCTCCCAGTCATCCTCGGCTTCCAAGCAGA GGCCTCTGGGTCCTCCCAGTTATCCTCGGCTTCCAAGCAGA Direct Gain 0 0.955220414896107 0 0.99995094537735 prediction 0.910440829792215 Functional Gain - SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8228895 chr4:8228895 nonsynonymous SNV 0.016 0 21 hPsi_associated_SNPs_105095 0 0 0 0 0 cytosol 0 0.438708275438876 0.9999018907547 0 hPsi_site_4055 iPseU_CNN:0.9999018907547;iRNA_PseU:0 4056 chr1 229773366 229773366 1 + G T SKCM 229773366 + 229773346 229773386 41 GAATTCCTCCAAGTGATAGGGACGTTCTTAGAGGAGCTAAT GAATTCCTCCAAGTGATAGGTACGTTCTTAGAGGAGCTAAT Direct Gain 0 0.955218617939701 0 1 prediction 0.910437235879401 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229773366 chr1:229773366 synonymous SNV . 0 21 hPsi_associated_SNPs_105096 0 0 1 0 0 Nucleus 0 0.438712173776596 1 0 hPsi_site_4056 iPseU_CNN:1;iRNA_PseU:0 4057 chr2 178084948 178084948 1 + C A rs188233157 178084948 - 178084928 178084968 41 CAAGGTAAATGTAGAATAGAGATGTTCTAAACACAGCTAGG CAAGGTAAATGTAGAATAGATATGTTCTAAACACAGCTAGG Direct Gain 0 0.955218426498218 0 0.999883651733398 prediction 0.910436852996436 Functional Gain - HNRNPA3 ENSG00000170144 UTR3 Human protein_coding chr2:178084948 chr2:178084948 . . 0 21 hPsi_associated_SNPs_105097 0 0 0 0 0 Cytosol 0 0.438720142036583 0.999767303466796 0 hPsi_site_4057 iPseU_CNN:0.999767303466796;iRNA_PseU:0 4058 chr9 32634873 32634873 1 + C T UCEC 32634873 + 32634853 32634893 41 AGCTTGGTGGCATCATGCTGCATAATCCCAGCCAATGGAAG AGCTTGGTGGCATCATGCTGTATAATCCCAGCCAATGGAAG Direct Gain 0 0.95521797087126 0 0.999748826026917 prediction 0.910435941742521 Functional Gain - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634873 chr9:32634873 nonsynonymous SNV 0.637 1 21 hPsi_associated_SNPs_105098 0 0 0 0 0 exosome 0 0.438718658115474 0.999497652053834 0 hPsi_site_4058 iPseU_CNN:0.999497652053834;iRNA_PseU:0 4059 chr4 128753856 128753856 1 + A T COAD 128753856 + 128753836 128753876 41 AGGAACTGGATAATTTCTGTAACCCCATCATTTACAAGCCC AGGAACTGGATAATTTCTGTTACCCCATCATTTACAAGCCC Direct Gain 0 0.955212214833906 0 0.0598309934139252 prediction 0.910424429667813 Functional Gain - HSPA4L ENSG00000164070 CDS Human protein_coding chr4:128753856 chr4:128753856 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_105099 0 0 1 0 1 Cytosol 0 0.438718583530417 0 0 hPsi_site_4059 iPseU_CNN:0;iRNA_PseU:0 4060 chr7 65546843 65546843 1 + G T UCEC 65546843 + 65546823 65546863 41 GCAGTGGACCCCATCATGGAGAAGTTCAACGCGTCCATTGC GCAGTGGACCCCATCATGGATAAGTTCAACGCGTCCATTGC Direct Gain 0 0.955211682166136 0 0.99999988079071 prediction 0.910423364332273 Functional Gain - ASL ENSG00000126522 CDS Human protein_coding chr7:65546843 chr7:65546843 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105100 0 0 1 0 0 Ribosome 0 0.438715398109154 0.99999976158142 0 hPsi_site_4060 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4061 chr1 209785331 209785331 1 + G A LUSC 209785331 - 209785311 209785351 41 TGCTGGCAGGGTAATTGGGTCAGGGCAGGGAGTGCTACACT TGCTGGCAGGGTAATTGGGTTAGGGCAGGGAGTGCTACACT Direct Gain 0 0.955203991867766 0 0.374276608228683 prediction 0.910407983735531 Functional Gain - CAMK1G ENSG00000008118 CDS Human protein_coding chr1:209785331 chr1:209785331 synonymous SNV . 0 21 hPsi_associated_SNPs_105101 0 0 0 0 0 exosome 0 0.438718595288008 0 0 hPsi_site_4061 iPseU_CNN:0;iRNA_PseU:0 4062 chr6 46726569 46726569 1 + C T LIHC 46726569 + 46726549 46726589 41 AAAGGGAGCTGGAGCTGTCTCTTCCTTCCCTAAATCAAAAC AAAGGGAGCTGGAGCTGTCTTTTCCTTCCCTAAATCAAAAC Direct Gain 0 0.955179660144706 0 0.770021975040436 prediction 0.910359320289412 Functional Gain - ANKRD66 ENSG00000230062 CDS Human protein_coding chr6:46726569 chr6:46726569 nonsynonymous SNV 0.973 2 21 hPsi_associated_SNPs_105102 0 0 0 0 0 unknown 0 0.438718592995029 0.540043950080872 0 hPsi_site_4062 iPseU_CNN:0.540043950080872;iRNA_PseU:0 4063 chr7 30963109 30963109 1 + C T COAD 30963109 + 30963089 30963129 41 GGGGGAGCCCTGGCTGTACTCATCTACGACTTCATCCTGGC GGGGGAGCCCTGGCTGTACTTATCTACGACTTCATCCTGGC Direct Gain 0 0.955176759144382 0 0.999708712100983 prediction 0.910353518288764 Functional Gain - AQP1 ENSG00000240583;ENSG00000250424 CDS Human other chr7:30963109 chr7:30963109 synonymous SNV . 0 21 hPsi_associated_SNPs_105103 0 0 1 0 1 Endoplasmic reticulum 0 0.438719521991449 0.999417424201966 0 hPsi_site_4063 iPseU_CNN:0.999417424201966;iRNA_PseU:0 4064 chr17 900385 900385 1 + G A SKCM 900385 - 900365 900405 41 GCATTGGGGGCGGCCGCCGCCATGACAGTCGCTGCCCAAGC GCATTGGGGGCGGCCGCCGCTATGACAGTCGCTGCCCAAGC Direct Gain 0 0.955173534465646 0 0.939417123794556 prediction 0.910347068931293 Functional Gain - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900385 chr17:900385 nonsynonymous SNV 0.841 1 21 hPsi_associated_SNPs_105104 0 0 0 0 0 Cytosol 0 0.438718197528858 0.878834247589112 0 hPsi_site_4064 iPseU_CNN:0.878834247589112;iRNA_PseU:0 4065 chr20 44669233 44669233 1 + C T rs138250479 44669233 + 44669213 44669253 41 GCTGGGGTCATCAAGTCTGCCTTCGACCCACCCAACTTCCC GCTGGGGTCATCAAGTCTGCTTTCGACCCACCCAACTTCCC Direct Gain 0 0.955172964902711 0 0.999986290931702 prediction 0.910345929805422 Functional Gain - SLC12A5 ENSG00000124140 CDS Human protein_coding chr20:44669233 chr20:44669233 synonymous SNV . 0 21 hPsi_associated_SNPs_105105 0 0 0 0 1 cytosol 0 0.438824155835786 0.999972581863404 0 hPsi_site_4065 iPseU_CNN:0.999972581863404;iRNA_PseU:0 4066 chr2 118577326 118577326 1 + G A BLCA 118577326 - 118577306 118577346 41 GGGCACCTCACTCTCATCTTCATCATTATCTGGCTTCTCCA GGGCACCTCACTCTCATCTTTATCATTATCTGGCTTCTCCA Direct Gain 0 0.955168989967739 0 0.695772111415863 prediction 0.910337979935478 Functional Gain - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118577326 chr2:118577326 nonsynonymous SNV 0.553 0 21 hPsi_associated_SNPs_105106 0 0 0 0 0 Nucleus 0 0.438717336428322 0.391544222831726 0 hPsi_site_4066 iPseU_CNN:0.391544222831726;iRNA_PseU:0 4067 chr5 149754546 149754546 1 + C T BLCA 149754546 + 149754526 149754566 41 TCAGGGAAGGCCCCCCAGGTCAGAGCCGCCTCGGCCCCTGC TCAGGGAAGGCCCCCCAGGTTAGAGCCGCCTCGGCCCCTGC Direct Gain 0 0.955165189186674 0 0.99999213218689 prediction 0.910330378373347 Functional Gain - TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754546 chr5:149754546 synonymous SNV . 0 21 hPsi_associated_SNPs_105107 0 0 1 0 1 Nucleus 0 0.438718603736995 0.99998426437378 0 hPsi_site_4067 iPseU_CNN:0.99998426437378;iRNA_PseU:0 4068 chr16 71417323 71417323 1 + G A GBM 71417323 - 71417303 71417343 41 GTTTGGGTGTATTCCTGGAGCTTGGGCTCATCGTACGGCCG GTTTGGGTGTATTCCTGGAGTTTGGGCTCATCGTACGGCCG Direct Gain 0 0.955161830188619 0 0.998255252838135 prediction 0.910323660377237 Functional Gain - CALB2 ENSG00000172137 CDS Human protein_coding chr16:71417323 chr16:71417323 synonymous SNV . 0 21 hPsi_associated_SNPs_105108 0 0 0 0 0 Ribosome 0 0.438718592825859 0.99651050567627 0 hPsi_site_4068 iPseU_CNN:0.99651050567627;iRNA_PseU:0 4069 chr1 27101630 27101630 1 + G T UCEC 27101630 + 27101610 27101650 41 AGCCCCCCATGATTCGGCGGGATATCACCTTCCCACCTGGC AGCCCCCCATGATTCGGCGGTATATCACCTTCCCACCTGGC Direct Gain 0 0.955155094041493 0 0.485627472400665 prediction 0.910310188082986 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27101630 chr1:27101630 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105109 0 0 1 0 0 Nucleus 0 0.438718592994632 0 0 hPsi_site_4069 iPseU_CNN:0;iRNA_PseU:0 4070 chr9 126133594 126133594 1 + C T UCEC 126133594 + 126133574 126133614 41 CTGGGCGCTGGGATGATGGGCTCCGTCACCTGGTGATGCTC CTGGGCGCTGGGATGATGGGTTCCGTCACCTGGTGATGCTC Direct Gain 0 0.955152832053965 0 0.997643947601318 prediction 0.91030566410793 Functional Gain - CRB2 ENSG00000148204 CDS Human protein_coding chr9:126133594 chr9:126133594 nonsynonymous SNV 0.855 0 21 hPsi_associated_SNPs_105110 0 0 0 0 0 exosome 0 0.439130767447176 0.995287895202636 0 hPsi_site_4070 iPseU_CNN:0.995287895202636;iRNA_PseU:0 4071 chr14 101200948 101200948 1 + G A UCEC 101200948 - 101200928 101200968 41 GTTTTCTTGTTGAGCTCTTTCATGGACACCTTCAGGATGCG GTTTTCTTGTTGAGCTCTTTTATGGACACCTTCAGGATGCG Direct Gain 0 0.955152718247413 0 0.998218953609467 prediction 0.910305436494827 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200948 chr14:101200948 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105111 0 0 0 0 0 Endoplasmic reticulum 0 0.438785879746381 0.996437907218934 0 hPsi_site_4071 iPseU_CNN:0.996437907218934;iRNA_PseU:0 4072 chr13 97485030 97485030 1 + G A SKCM 97485030 - 97485010 97485050 41 CAACAGGATGGTGTTTCTTTCACTCTCGTTCATGAAAGTCA CAACAGGATGGTGTTTCTTTTACTCTCGTTCATGAAAGTCA Direct Gain 0 0.955147890959933 0 0.42904269695282 prediction 0.910295781919867 Functional Gain - HS6ST3 ENSG00000185352 CDS Human protein_coding chr13:97485030 chr13:97485030 nonsynonymous SNV 0.907 1 21 hPsi_associated_SNPs_105112 0 0 0 0 0 exosome 0 0.442139409296953 0 0 hPsi_site_4072 iPseU_CNN:0;iRNA_PseU:0 4073 chr4 134073204 134073204 1 + G T LUAD 134073204 + 134073184 134073224 41 GCATGGACTGGCGCACCGGGGAGCTGCGCACAGCACGCCGA GCATGGACTGGCGCACCGGGTAGCTGCGCACAGCACGCCGA Direct Gain 0 0.955147581671338 0 0.999999642372131 prediction 0.910295163342675 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073204 chr4:134073204 stopgain 0.994 1 21 hPsi_associated_SNPs_105113 0 0 0 0 0 cytosol 0 0.438702357690502 0.999999284744262 0 hPsi_site_4073 iPseU_CNN:0.999999284744262;iRNA_PseU:0 4074 chr1 209878160 209878160 1 + G A rs529612378 209878160 - 209878140 209878180 41 ACGGGGGAGGCTGGAGTAGTCTCAGGCAGTGCTAGCCAATT ACGGGGGAGGCTGGAGTAGTTTCAGGCAGTGCTAGCCAATT Direct Gain 0 0.95514555154073 0 0.999902367591858 prediction 0.91029110308146 Functional Gain - LOC101930114 ENSG00000227591 ncRNA_intronic Human antisense chr1:209878160 chr1:209878160 . . 0 21 hPsi_associated_SNPs_105114 0 0 0 0 0 Ribosome 0 0.438718592978074 0.999804735183716 0 hPsi_site_4074 iPseU_CNN:0.999804735183716;iRNA_PseU:0 4075 chr15 42042802 42042802 1 + G A UCEC 42042802 - 42042782 42042822 41 GCTCACCACCTTTTCTACATCATCAACCTCCTCACTCTGGT GCTCACCACCTTTTCTACATTATCAACCTCCTCACTCTGGT Direct Gain 0 0.955144562634243 0 0.161997824907303 prediction 0.910289125268487 Functional Gain - MGA ENSG00000174197 CDS Human protein_coding chr15:42042802 chr15:42042802 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105115 0 0 0 0 0 Cytosol 0 0.438692696603154 0 0 hPsi_site_4075 iPseU_CNN:0;iRNA_PseU:0 4076 chr7 143701575 143701575 1 + C T LUAD 143701575 + 143701555 143701595 41 TCCCTGGCGAAGATCTACTTCATCTCCTGCCTCAGCTTCTG TCCCTGGCGAAGATCTACTTTATCTCCTGCCTCAGCTTCTG Direct Gain 0 0.955143474990576 0 0.998352468013763 prediction 0.910286949981152 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701575 chr7:143701575 synonymous SNV . 0 21 hPsi_associated_SNPs_105116 0 0 0 0 0 unknown 0 0.4387186362205 0.996704936027526 0 hPsi_site_4076 iPseU_CNN:0.996704936027526;iRNA_PseU:0 4077 chr1 12855755 12855755 1 + G T UCEC 12855755 + 12855735 12855775 41 CCCCTCGGAGCTCTGCTGGAGAAAATTGCTGCCTCTCTCAA CCCCTCGGAGCTCTGCTGGATAAAATTGCTGCCTCTCTCAA Direct Gain 0 0.955140118070075 0 0.999738097190857 prediction 0.91028023614015 Functional Gain - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12855755 chr1:12855755 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_105117 0 0 0 0 0 unknown 0 0.438718592995105 0.999476194381714 0 hPsi_site_4077 iPseU_CNN:0.999476194381714;iRNA_PseU:0 4078 chr8 6338302 6338302 1 + G A BLCA 6338302 - 6338282 6338322 41 AAGCACGTGAGTCGTGGTCTCACAGACGTCTGGTGCAATTG AAGCACGTGAGTCGTGGTCTTACAGACGTCTGGTGCAATTG Direct Gain 0 0.955139938968826 0 0.395541548728943 prediction 0.910279877937651 Functional Gain - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6338302 chr8:6338302 nonsynonymous SNV 0.211 2 21 hPsi_associated_SNPs_105118 0 0 0 0 0 Nucleus 0 0.436353387789929 0 0 hPsi_site_4078 iPseU_CNN:0;iRNA_PseU:0 4079 chr1 228566473 228566473 1 + C T rs540744111 228566473 + 228566453 228566493 41 GCGCGCTGCTGTACAAGAGGCACAACCTGGCCCAGGTGCGC GCGCGCTGCTGTACAAGAGGTACAACCTGGCCCAGGTGCGC Direct Gain 0 0.955137366197378 0 0.97356128692627 prediction 0.910274732394757 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228566473 chr1:228566473 nonsynonymous SNV 0.539 0 21 hPsi_associated_SNPs_105119 0 0 0 0 0 Ribosome 0 0.438662944562344 0.94712257385254 0 hPsi_site_4079 iPseU_CNN:0.94712257385254;iRNA_PseU:0 4080 chr3 100467340 100467340 1 + C T BLCA 100467340 + 100467320 100467360 41 GTAACCGTCCTCCCTTTGGTCAGGGCTATACCCAACCTGGA GTAACCGTCCTCCCTTTGGTTAGGGCTATACCCAACCTGGA Direct Gain 0 0.955131586229896 0 0.996861279010773 prediction 0.910263172459792 Functional Gain - TFG ENSG00000114354 CDS Human protein_coding chr3:100467340 chr3:100467340 stopgain 1.000 1 21 hPsi_associated_SNPs_105120 0 0 1 0 0 Cytosol 0 0.438718592995102 0.993722558021546 0 hPsi_site_4080 iPseU_CNN:0.993722558021546;iRNA_PseU:0 4081 chr5 149935679 149935679 1 + C A rs146020627 149935679 - 149935659 149935699 41 AGAGTGAATTAGTGGACATTGAAGACTGGCCTCGCTGGCCC AGAGTGAATTAGTGGACATTTAAGACTGGCCTCGCTGGCCC Direct Gain 0 0.955126789244283 0 0.999773383140564 prediction 0.910253578488566 Functional Gain - NDST1 ENSG00000070614 UTR3 Human protein_coding chr5:149935679 chr5:149935679 . . 0 21 hPsi_associated_SNPs_105121 0 0 0 0 0 Cytosol 0 0.438718592966745 0.999546766281128 0 hPsi_site_4081 iPseU_CNN:0.999546766281128;iRNA_PseU:0 4082 chr19 14038837 14038837 1 + G A LGG 14038837 - 14038817 14038857 41 GTGGGGGGTCTCACTGTGGGCACAGCTGCCGGCACAGGGTC GTGGGGGGTCTCACTGTGGGTACAGCTGCCGGCACAGGGTC Direct Gain 0 0.955113601283756 0 0.995370388031006 prediction 0.910227202567512 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14038837 chr19:14038837 synonymous SNV . 0 21 hPsi_associated_SNPs_105122 0 0 0 0 0 chromatin 0 0.438736444928454 0.990740776062012 0 hPsi_site_4082 iPseU_CNN:0.990740776062012;iRNA_PseU:0 4083 chr1 242035351 242035351 1 + G A COAD 242035351 - 242035331 242035371 41 AGAATACTGACTCAACAGGTCATCTTCTGACAGCTCTGCTA AGAATACTGACTCAACAGGTTATCTTCTGACAGCTCTGCTA Direct Gain 0 0.955113162649459 0 0.999333560466766 prediction 0.910226325298917 Functional Gain - EXO1 ENSG00000174371 CDS Human protein_coding chr1:242035351 chr1:242035351 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_105123 0 0 0 0 0 Nucleus 0 0.438718851783781 0.998667120933532 0 hPsi_site_4083 iPseU_CNN:0.998667120933532;iRNA_PseU:0 4084 chr17 78269582 78269582 1 + G T LUSC 78269582 + 78269562 78269602 41 CACCAGATGAGTTTCACCGTGACCTAAGCCACATCCTTGGG CACCAGATGAGTTTCACCGTTACCTAAGCCACATCCTTGGG Direct Gain 0 0.955099802169471 0 0.999849557876587 prediction 0.910199604338943 Functional Gain - RNF213 ENSG00000173821 CDS Human protein_coding chr17:78269582 chr17:78269582 nonsynonymous SNV 0.012 3 21 hPsi_associated_SNPs_105124 0 0 1 0 1 Nucleus 0 0.438323546179076 0.999699115753174 0 hPsi_site_4084 iPseU_CNN:0.999699115753174;iRNA_PseU:0 4085 chr1 18688682 18688682 1 + C A UCEC 18688682 - 18688662 18688702 41 GACACGATGCAGACCAGCGTGAAGTTCTGGGCTTGGTAGCG GACACGATGCAGACCAGCGTTAAGTTCTGGGCTTGGTAGCG Direct Gain 0 0.955099480466283 0 0.99840521812439 prediction 0.910198960932566 Functional Gain - IGSF21 ENSG00000117154 CDS Human protein_coding chr1:18688682 chr1:18688682 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_105125 0 0 0 0 0 Nucleus 0 0.434338409552812 0.99681043624878 0 hPsi_site_4085 iPseU_CNN:0.99681043624878;iRNA_PseU:0 4086 chrX 49142890 49142890 1 + G A SKCM 49142890 - 49142870 49142910 41 TGTGACAGAGAGCCCCTCTTCACCCTCCCCTTCATCATCAG TGTGACAGAGAGCCCCTCTTTACCCTCCCCTTCATCATCAG Direct Gain 0 0.955098328387785 0 0.990399241447449 prediction 0.910196656775569 Functional Gain - PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49142890 chrX:49142890 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_105126 0 0 0 0 0 Endoplasmic reticulum 0 0.438721113902094 0.980798482894898 0 hPsi_site_4086 iPseU_CNN:0.980798482894898;iRNA_PseU:0 4087 chr19 48957656 48957656 1 + G A rs182894282 48957656 - 48957636 48957676 41 GGCCGGGGGTGGGGCTAGCTCAGAGCCGCAGAGGGGGAGCC GGCCGGGGGTGGGGCTAGCTTAGAGCCGCAGAGGGGGAGCC Direct Gain 0 0.955094347897501 0 0.999333739280701 prediction 0.910188695795002 Functional Gain - GRWD1 ENSG00000105447 UTR3 Human protein_coding chr19:48957656 chr19:48957656 . . 0 21 hPsi_associated_SNPs_105127 0 0 0 0 0 Ribosome 0 0.438718592996435 0.998667478561402 0 hPsi_site_4087 iPseU_CNN:0.998667478561402;iRNA_PseU:0 4088 chr6 161137785 161137785 1 + C A LGG 161137785 - 161137765 161137805 41 TCATACTCACTGCAGCGGGGGATGTCACAAAGTTCCCAGCG TCATACTCACTGCAGCGGGGTATGTCACAAAGTTCCCAGCG Direct Gain 0 0.955091864044512 0 0.9915611743927 prediction 0.910183728089023 Functional Gain - PLG ENSG00000122194 CDS Human protein_coding chr6:161137785 chr6:161137785 synonymous SNV . 0 21 hPsi_associated_SNPs_105128 0 0 0 0 0 exosome 0 0.43877978405497 0.9831223487854 0 hPsi_site_4088 iPseU_CNN:0.9831223487854;iRNA_PseU:0 4089 chr16 304619 304619 1 + C T SKCM 304619 + 304599 304639 41 GTGTTCGTCGTCTCATTCGTCATCCCGTGTCCAGACCGGCC GTGTTCGTCGTCTCATTCGTTATCCCGTGTCCAGACCGGCC Direct Gain 0 0.955087916956266 0 0.661944448947906 prediction 0.910175833912533 Functional Gain - FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:304619 chr16:304619 synonymous SNV . 0 21 hPsi_associated_SNPs_105129 0 0 1 0 1 Ribosome 0 0.436732688937379 0.323888897895812 0 hPsi_site_4089 iPseU_CNN:0.323888897895812;iRNA_PseU:0 4090 chr13 35731354 35731354 1 + G A LUSC 35731354 - 35731334 35731374 41 GACTCTCCAGCCTCCCCATTCATATTTTATTGCATGATACA GACTCTCCAGCCTCCCCATTTATATTTTATTGCATGATACA Direct Gain 0 0.955085708362078 0 0.998452425003052 prediction 0.910171416724156 Functional Gain - NBEA ENSG00000172915 CDS Human protein_coding chr13:35731354 chr13:35731354 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105130 0 0 0 0 0 Nucleus 0 0.438718805981095 0.996904850006104 0 hPsi_site_4090 iPseU_CNN:0.996904850006104;iRNA_PseU:0 4091 chr12 13155279 13155279 1 + G T UCEC 13155279 + 13155259 13155299 41 GCTTCCCTCGAGTGGAGCCAGACAGCAGTAGTCACCCTGAA GCTTCCCTCGAGTGGAGCCATACAGCAGTAGTCACCCTGAA Direct Gain 0 0.955081653267262 0 0.955238938331604 prediction 0.910163306534524 Functional Gain - HTR7P1 ENSG00000183935 ncRNA_exonic Human transcribed_processed_pseudogene chr12:13155279 chr12:13155279 . . 0 21 hPsi_associated_SNPs_105131 0 0 0 0 0 unknown 0 0.438792497157043 0.910477876663208 0 hPsi_site_4091 iPseU_CNN:0.910477876663208;iRNA_PseU:0 4092 chr17 72739444 72739444 1 + G T STAD 72739444 + 72739424 72739464 41 CAGCCTTGCTTCTGCTGTATGACATCACCAACAAATCTTCT CAGCCTTGCTTCTGCTGTATTACATCACCAACAAATCTTCT Direct Gain 0 0.955081056632271 0 0.679827451705933 prediction 0.910162113264542 Functional Gain - RAB37 ENSG00000172794 CDS Human protein_coding chr17:72739444 chr17:72739444 nonsynonymous SNV 0.995 5 21 hPsi_associated_SNPs_105132 0 0 0 0 1 nucleus 0 0.438115997090082 0.359654903411866 0 hPsi_site_4092 iPseU_CNN:0.359654903411866;iRNA_PseU:0 4093 chr17 56234781 56234781 1 + G A rs150737599 56234781 - 56234761 56234801 41 GTGCGCGGCTTCGGATTGGTCTTGTGTTTTCTCAGGGTGCA GTGCGCGGCTTCGGATTGGTTTTGTGTTTTCTCAGGGTGCA Direct Gain 0 0.95507894301127 0 0.999953746795654 prediction 0.910157886022541 Functional Gain - MSX2P1 ENSG00000229590 ncRNA_exonic Human processed_pseudogene chr17:56234781 chr17:56234781 . . 0 21 hPsi_associated_SNPs_105133 0 0 0 0 0 unknown 0 0.438722075011171 0.999907493591308 0 hPsi_site_4093 iPseU_CNN:0.999907493591308;iRNA_PseU:0 4094 chr19 30156412 30156412 1 + G A rs373563812 30156412 - 30156392 30156432 41 GGGACGGTGGGGGGACTCACCTTCTGCGCCGGCCCCGCGCC GGGACGGTGGGGGGACTCACTTTCTGCGCCGGCCCCGCGCC Direct Gain 0 0.955077540113204 0 0.998737812042236 prediction 0.910155080226407 Functional Gain - PLEKHF1 ENSG00000166289 UTR5 Human protein_coding chr19:30156412 chr19:30156412 . . 0 21 hPsi_associated_SNPs_105134 0 0 0 0 0 Cytosol 0 0.438703903457353 0.997475624084472 0 hPsi_site_4094 iPseU_CNN:0.997475624084472;iRNA_PseU:0 4095 chrX 70443614 70443614 1 + C T BLCA 70443614 + 70443594 70443634 41 GTGAACCGGCATTCTACTGCCATTGGCCGAGTATGGCTCTC GTGAACCGGCATTCTACTGCTATTGGCCGAGTATGGCTCTC Direct Gain 0 0.955076157875815 0 0.776544511318207 prediction 0.91015231575163 Functional Gain - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70443614 chrX:70443614 synonymous SNV . 0 21 hPsi_associated_SNPs_105135 0 0 1 0 1 Endoplasmic reticulum 0 0.438481846112848 0.553089022636414 0 hPsi_site_4095 iPseU_CNN:0.553089022636414;iRNA_PseU:0 4096 chr9 100403101 100403101 1 + G A UCEC 100403101 - 100403081 100403121 41 GTTTCATTTGCATCAGAGGTCTTTCTCCTTTTGTGAGGCTG GTTTCATTTGCATCAGAGGTTTTTCTCCTTTTGTGAGGCTG Direct Gain 0 0.95507262797583 0 0.286203533411026 prediction 0.910145255951661 Functional Gain - NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100403101 chr9:100403101 synonymous SNV . 0 21 hPsi_associated_SNPs_105136 0 0 0 0 0 Nucleus 0 0.434911388265039 0 0 hPsi_site_4096 iPseU_CNN:0;iRNA_PseU:0 4097 chr1 158152847 158152847 1 + C A LUAD 158152847 - 158152827 158152867 41 CACATCCAGGGTTGCTCGGAGATACCATGTCTCGTCAGCAT CACATCCAGGGTTGCTCGGATATACCATGTCTCGTCAGCAT Direct Gain 0 0.955067590464792 0 0.997998356819153 prediction 0.910135180929583 Functional Gain - CD1D ENSG00000158473 CDS Human protein_coding chr1:158152847 chr1:158152847 nonsynonymous SNV 0.731 3 21 hPsi_associated_SNPs_105137 0 0 0 0 0 Endoplasmic reticulum 0 0.437839663787587 0.995996713638306 0 hPsi_site_4097 iPseU_CNN:0.995996713638306;iRNA_PseU:0 4098 chr1 22987712 22987712 1 + G T LUSC 22987712 + 22987692 22987732 41 AGAAGGTGGTCACCTTCTGTGACTATGCCTACAACACCTTC AGAAGGTGGTCACCTTCTGTTACTATGCCTACAACACCTTC Direct Gain 0 0.955066889719075 0 0.993396997451782 prediction 0.91013377943815 Functional Gain - C1QB ENSG00000173369 CDS Human protein_coding chr1:22987712 chr1:22987712 nonsynonymous SNV 0.911 4 21 hPsi_associated_SNPs_105138 0 0 0 0 0 exosome 0 0.438718593000208 0.986793994903564 0 hPsi_site_4098 iPseU_CNN:0.986793994903564;iRNA_PseU:0 4099 chr22 22786651 22786651 1 + C T LUSC 22786651 + 22786631 22786671 41 GGAAAGGCTCCCAAACTCCTCATCTATTATGATGATCTGCT GGAAAGGCTCCCAAACTCCTTATCTATTATGATGATCTGCT Direct Gain 0 0.955060549757591 0 0.543673813343048 prediction 0.910121099515182 Functional Gain - BMS1P20;ZNF280B ENSG00000211655 CDS Human IG_V_gene chr22:22786651 chr22:22786651 synonymous SNV . 0 21 hPsi_associated_SNPs_105139 0 0 0 0 0 unknown 0 0.438718580380451 0.087347626686096 0 hPsi_site_4099 iPseU_CNN:0.087347626686096;iRNA_PseU:0 4100 chr1 231885718 231885718 1 + C A LUSC 231885718 - 231885698 231885738 41 GGAAGTTGAAAGTGCAGGCTGATTTTCTCTTGTTCCAGGTC GGAAGTTGAAAGTGCAGGCTTATTTTCTCTTGTTCCAGGTC Direct Gain 0 0.955048787002829 0 0.642021417617798 prediction 0.910097574005657 Functional Gain - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231885718 chr1:231885718 synonymous SNV . 0 21 hPsi_associated_SNPs_105140 0 0 0 0 0 Nucleus 0 0.438715435897934 0.284042835235596 0 hPsi_site_4100 iPseU_CNN:0.284042835235596;iRNA_PseU:0 4101 chr1 76276428 76276428 1 + C T UCEC 76276428 + 76276408 76276448 41 ACCTTTGGAAATAATAATGTCAAATACTGCTTGTGCTGTGG ACCTTTGGAAATAATAATGTTAAATACTGCTTGTGCTGTGG Direct Gain 0 0.955042934665064 0 0.976794242858887 prediction 0.910085869330128 Functional Gain - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76276428 chr1:76276428 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105141 0 0 0 0 2 exosome 0 0.438283771952028 0.953588485717774 0 hPsi_site_4101 iPseU_CNN:0.953588485717774;iRNA_PseU:0 4102 chr10 118368599 118368599 1 + G A LUAD 118368599 - 118368579 118368619 41 CGTGAGGGTGAGCAGCGTGTCTTCCCGCACTGTGTCTTCGC CGTGAGGGTGAGCAGCGTGTTTTCCCGCACTGTGTCTTCGC Direct Gain 0 0.955034512549695 0 0.844809055328369 prediction 0.91006902509939 Functional Gain - PNLIPRP1 ENSG00000187021 CDS Human protein_coding chr10:118368599 chr10:118368599 nonsynonymous SNV 0.020 1 21 hPsi_associated_SNPs_105142 0 0 0 0 0 unknown 0 0.438807712207323 0.689618110656738 0 hPsi_site_4102 iPseU_CNN:0.689618110656738;iRNA_PseU:0 4103 chr22 21322183 21322183 1 + C A LUSC 21322183 - 21322163 21322203 41 AGGAGCACAGATGGGGAGCTGTCGGAGGCCTAGGGCGCCCC AGGAGCACAGATGGGGAGCTTTCGGAGGCCTAGGGCGCCCC Direct Gain 0 0.955030285935868 0 0.987529039382935 prediction 0.910060571871736 Functional Gain - AIFM3 ENSG00000183773 CDS Human protein_coding chr22:21322183 chr22:21322183 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105143 0 0 0 0 0 exosome 0 0.438681276838823 0.97505807876587 0 hPsi_site_4103 iPseU_CNN:0.97505807876587;iRNA_PseU:0 4104 chr7 34118567 34118567 1 + G A SKCM 34118567 - 34118547 34118587 41 CGAGGCAGGGGAGGAGCAGTCTTTTGTCAAAACGTACTGAC CGAGGCAGGGGAGGAGCAGTTTTTTGTCAAAACGTACTGAC Direct Gain 0 0.955024946489703 0 0.998952388763428 prediction 0.910049892979405 Functional Gain - BMPER ENSG00000164619 CDS Human protein_coding chr7:34118567 chr7:34118567 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105144 0 0 0 0 0 exosome 0 0.438915990390953 0.997904777526856 0 hPsi_site_4104 iPseU_CNN:0.997904777526856;iRNA_PseU:0 4105 chr13 37574681 37574681 1 + C T rs7334233 37574681 + 37574661 37574701 41 CTGTTGGTGTTATTCTGAGTCACAGCACCAGCTCTTTTATA CTGTTGGTGTTATTCTGAGTTACAGCACCAGCTCTTTTATA Direct Gain 0 0.955017047593585 0 0.999619245529175 prediction 0.910034095187171 Functional Gain - EXOSC8 ENSG00000120699 UTR5 Human protein_coding chr13:37574681 chr13:37574681 . . 0 21 hPsi_associated_SNPs_105145 0 0 1 1 0 Ribosome 0 0.446232416314371 0.99923849105835 0 hPsi_site_4105 iPseU_CNN:0.99923849105835;iRNA_PseU:0 4106 chr1 93730380 93730380 1 + T A rs139422966 93730380 - 93730360 93730400 41 TGATGCAAATTGCTTACAGTATCCTGAGCTTCTTCTAATTC TGATGCAAATTGCTTACAGTTTCCTGAGCTTCTTCTAATTC Direct Gain 0 0.955014198103995 0 0.913908720016479 prediction 0.91002839620799 Functional Gain - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93730380 chr1:93730380 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_105146 0 0 0 0 0 chromatin 0 0.438711748134399 0.827817440032958 0 hPsi_site_4106 iPseU_CNN:0.827817440032958;iRNA_PseU:0 4107 chr22 45127156 45127156 1 + G A rs150998424 45127156 - 45127136 45127176 41 GCACAGGTAGGTACACTCGGCACAGGTGAGACCTGCATCAG GCACAGGTAGGTACACTCGGTACAGGTGAGACCTGCATCAG Direct Gain 0 0.955006706751202 0 0.999512493610382 prediction 0.910013413502405 Functional Gain - PRR5;PRR5-ARHGAP8 ENSG00000186654;ENSG00000241484;ENSG00000248405 intronic Human other chr22:45127156 chr22:45127156 . . 0 21 hPsi_associated_SNPs_105147 0 0 0 0 0 unknown 0 0.43818666493346 0.999024987220764 0 hPsi_site_4107 iPseU_CNN:0.999024987220764;iRNA_PseU:0 4108 chr5 14477064 14477064 1 + G T UCEC 14477064 + 14477044 14477084 41 AAAAACTAGGATCCCTTTTTGTTAAACACGTAAGCACAATA AAAAACTAGGATCCCTTTTTTTTAAACACGTAAGCACAATA Direct Gain 0 0.955002830031876 0 0.0743579268455505 prediction 0.910005660063753 Functional Gain - TRIO ENSG00000038382 CDS Human protein_coding chr5:14477064 chr5:14477064 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_105148 0 0 0 0 2 Nucleus 0 0.438718306395422 0 0 hPsi_site_4108 iPseU_CNN:0;iRNA_PseU:0 4109 chr22 29169765 29169765 1 + G A UCEC 29169765 - 29169745 29169785 41 AACAACCACTGAAACTTACTCATCATCCTCCTCCTCCTCTC AACAACCACTGAAACTTACTTATCATCCTCCTCCTCCTCTC Direct Gain 0 0.95499729849932 0 0.999667763710022 prediction 0.90999459699864 Functional Gain - CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29169765 chr22:29169765 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105149 0 0 0 0 0 Ribosome 0 0.438718662023059 0.999335527420044 0 hPsi_site_4109 iPseU_CNN:0.999335527420044;iRNA_PseU:0 4110 chr5 89970023 89970023 1 + C T SKCM 89970023 + 89970003 89970043 41 GAAAAGGAAACGACTGATATCACCATCAAAGCTAGTGATCA GAAAAGGAAACGACTGATATTACCATCAAAGCTAGTGATCA Direct Gain 0 0.954987632600235 0 0.954270899295807 prediction 0.909975265200471 Functional Gain - ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:89970023 chr5:89970023 synonymous SNV . 0 21 hPsi_associated_SNPs_105150 0 0 0 0 1 Nucleus 0 0.438516891941877 0.908541798591614 0 hPsi_site_4110 iPseU_CNN:0.908541798591614;iRNA_PseU:0 4111 chr17 21731538 21731538 1 + G A LUAD 21731538 - 21731518 21731558 41 GTAGTCAGAAAGAGTGCGGCCATCTTCCAACTTCTTGCCTG GTAGTCAGAAAGAGTGCGGCTATCTTCCAACTTCTTGCCTG Direct Gain 0 0.954984876099037 0 0.999961137771606 prediction 0.909969752198074 Functional Gain - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731538 chr17:21731538 nonsynonymous SNV 0.649 0 21 hPsi_associated_SNPs_105151 0 0 0 0 0 Ribosome 0 0.438718592980558 0.999922275543212 0 hPsi_site_4111 iPseU_CNN:0.999922275543212;iRNA_PseU:0 4112 chr6 50712944 50712944 1 + G T UCEC 50712944 + 50712924 50712964 41 GAACAGACAGCAAGAAAAAAGATGATCCTGGCGACCAAGTA GAACAGACAGCAAGAAAAAATATGATCCTGGCGACCAAGTA Direct Gain 0 0.954982703570893 0 0.999918460845947 prediction 0.909965407141786 Functional Gain - TFAP2D ENSG00000008197 CDS Human protein_coding chr6:50712944 chr6:50712944 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105152 0 0 0 0 1 unknown 0 0.438718799098678 0.999836921691894 0 hPsi_site_4112 iPseU_CNN:0.999836921691894;iRNA_PseU:0 4113 chr9 6986621 6986621 1 + C A LUAD 6986621 - 6986601 6986641 41 TCTCCACTGGGGACCGCTGGGATTTCCCCAGGTTCAAGGCC TCTCCACTGGGGACCGCTGGTATTTCCCCAGGTTCAAGGCC Direct Gain 0 0.954979304437417 0 0.755759239196777 prediction 0.909958608874834 Functional Gain - KDM4C ENSG00000107077 CDS Human protein_coding chr9:6986621 chr9:6986621 synonymous SNV . 0 21 hPsi_associated_SNPs_105153 0 0 0 0 0 Nucleus 0 0.43871859296845 0.511518478393554 0 hPsi_site_4113 iPseU_CNN:0.511518478393554;iRNA_PseU:0 4114 chr12 82783629 82783629 1 + G A CESC 82783629 - 82783609 82783649 41 TGAACTTCATGAGATTTCTTCATATTCATAAACTCAACTGC TGAACTTCATGAGATTTCTTTATATTCATAAACTCAACTGC Direct Gain 0 0.954978016612577 0 0.0659423172473907 prediction 0.909956033225153 Functional Gain - METTL25 ENSG00000127720 CDS Human protein_coding chr12:82783629 chr12:82783629 nonsynonymous SNV 0.968 0 21 hPsi_associated_SNPs_105154 0 0 0 0 0 cytosol 0 0.435178830775833 0 0 hPsi_site_4114 iPseU_CNN:0;iRNA_PseU:0 4115 chr3 32995243 32995243 1 + G A LGG 32995243 - 32995223 32995263 41 ACATCCAGGAAATCATCTTGCACAGACCTAGCCCAAAAACC ACATCCAGGAAATCATCTTGTACAGACCTAGCCCAAAAACC Direct Gain 0 0.954969632385256 0 0.982014954090118 prediction 0.909939264770511 Functional Gain - CCR4 ENSG00000183813 CDS Human protein_coding chr3:32995243 chr3:32995243 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_105155 0 0 0 0 0 exosome 0 0.438735678089387 0.964029908180236 0 hPsi_site_4115 iPseU_CNN:0.964029908180236;iRNA_PseU:0 4116 chr1 164761828 164761828 1 + G A SKCM 164761828 - 164761808 164761848 41 GCCGCCGACCCTCCGCCCTTCTCAGGCCCCGCCACGCCTTC GCCGCCGACCCTCCGCCCTTTTCAGGCCCCGCCACGCCTTC Direct Gain 0 0.954965706562333 0 0.999997854232788 prediction 0.909931413124667 Functional Gain - PBX1 ENSG00000185630 CDS Human protein_coding chr1:164761828 chr1:164761828 synonymous SNV . 0 21 hPsi_associated_SNPs_105156 0 0 0 0 0 Ribosome 0 0.438718592985225 0.999995708465576 0 hPsi_site_4116 iPseU_CNN:0.999995708465576;iRNA_PseU:0 4117 chr3 133529974 133529974 1 + C A UCEC 133529974 - 133529954 133529994 41 GGCCGGGAAGGTCAATCAAGGTCAGACTATTGCCCTGGGGA GGCCGGGAAGGTCAATCAAGTTCAGACTATTGCCCTGGGGA Direct Gain 0 0.954963375116153 0 0.560996055603027 prediction 0.909926750232307 Functional Gain - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133529974 chr3:133529974 nonsynonymous SNV 0.989 0 21 hPsi_associated_SNPs_105157 0 0 0 0 0 Ribosome 0 0.438721449179385 0.121992111206054 0 hPsi_site_4117 iPseU_CNN:0.121992111206054;iRNA_PseU:0 4118 chr1 35227410 35227410 1 + C A UCEC 35227410 - 35227390 35227430 41 GTCACCATGAAGTAGGTGAAGACCTTCTTCTCCGTGGGCCG GTCACCATGAAGTAGGTGAATACCTTCTTCTCCGTGGGCCG Direct Gain 0 0.954960917644089 0 0.999992609024048 prediction 0.909921835288178 Functional Gain - GJB4 ENSG00000189433 CDS Human protein_coding chr1:35227410 chr1:35227410 synonymous SNV . 0 21 hPsi_associated_SNPs_105158 0 0 0 0 0 exosome 0 0.438718598319859 0.999985218048096 0 hPsi_site_4118 iPseU_CNN:0.999985218048096;iRNA_PseU:0 4119 chrX 47230094 47230094 1 + G T SARC 47230094 + 47230074 47230114 41 GCTAATGGGACATCACCCCAGAGATTCCCTGCCCTGATTCC GCTAATGGGACATCACCCCATAGATTCCCTGCCCTGATTCC Direct Gain 0 0.954957009109184 0 0.87847888469696 prediction 0.909914018218368 Functional Gain - ZNF157 ENSG00000147117 CDS Human protein_coding chrX:47230094 chrX:47230094 nonsynonymous SNV 0.985 2 21 hPsi_associated_SNPs_105159 0 0 0 0 1 exosome 0 0.438718592985558 0.75695776939392 0 hPsi_site_4119 iPseU_CNN:0.75695776939392;iRNA_PseU:0 4120 chrX 91873543 91873543 1 + G T LUSC 91873543 + 91873523 91873563 41 AGCCCACCACCGATACAGGTGTCTGCTCTCCACCACAGTCC AGCCCACCACCGATACAGGTTTCTGCTCTCCACCACAGTCC Direct Gain 0 0.9549562712222 0 0.873915076255798 prediction 0.909912542444399 Functional Gain - PCDH11X ENSG00000102290 CDS Human protein_coding chrX:91873543 chrX:91873543 synonymous SNV . 0 21 hPsi_associated_SNPs_105160 0 0 0 0 0 exosome 0 0.439155251643692 0.747830152511596 0 hPsi_site_4120 iPseU_CNN:0.747830152511596;iRNA_PseU:0 4121 chr1 152636858 152636858 1 + G A SKCM 152636858 - 152636838 152636878 41 GGCCCCAGAAGGTTCACTCTCACAGCAATCGGGGCTCTGGT GGCCCCAGAAGGTTCACTCTTACAGCAATCGGGGCTCTGGT Direct Gain 0 0.954950721003024 0 0.99976909160614 prediction 0.909901442006047 Functional Gain - LCE2D ENSG00000187223 CDS Human protein_coding chr1:152636858 chr1:152636858 nonsynonymous SNV 0.057 1 21 hPsi_associated_SNPs_105161 0 0 0 0 0 unknown 0 0.438717760860437 0.99953818321228 0 hPsi_site_4121 iPseU_CNN:0.99953818321228;iRNA_PseU:0 4122 chr11 55541012 55541012 1 + C T COAD 55541012 + 55540992 55541032 41 GTTCCACTCTTTCTGGTTTTCTTGTTCGTCTACACAGTCAC GTTCCACTCTTTCTGGTTTTTTTGTTCGTCTACACAGTCAC Direct Gain 0 0.954949845333451 0 0.611438989639282 prediction 0.909899690666903 Functional Gain - OR5D13 ENSG00000198877 CDS Human other chr11:55541012 chr11:55541012 synonymous SNV . 0 21 hPsi_associated_SNPs_105162 0 0 0 0 0 unknown 0 0.438762709744582 0.222877979278564 0 hPsi_site_4122 iPseU_CNN:0.222877979278564;iRNA_PseU:0 4123 chr6 155450612 155450612 1 + C A UCEC 155450612 - 155450592 155450632 41 GAGTAGGCAACACCTCTGGAGACCTTGCATGTGGGGCCACC GAGTAGGCAACACCTCTGGATACCTTGCATGTGGGGCCACC Direct Gain 0 0.954948723440842 0 0.995287775993347 prediction 0.909897446881684 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155450612 chr6:155450612 synonymous SNV . 0 21 hPsi_associated_SNPs_105163 0 0 0 0 0 Cytosol 0 0.438725756182642 0.990575551986694 0 hPsi_site_4123 iPseU_CNN:0.990575551986694;iRNA_PseU:0 4124 chr12 9720678 9720678 1 + G T UCEC 9720678 + 9720658 9720698 41 GAGGTGTACACCCACCCTGTGATATTCTTCCTCATATTCAG GAGGTGTACACCCACCCTGTTATATTCTTCCTCATATTCAG Direct Gain 0 0.954947293135957 0 0.999958395957947 prediction 0.909894586271913 Functional Gain - DDX12P;KLRB1 ENSG00000214776 ncRNA_exonic Human protein_coding chr12:9720678 chr12:9720678 . . 0 21 hPsi_associated_SNPs_105164 0 0 0 0 0 unknown 0 0.438801704983415 0.999916791915894 0 hPsi_site_4124 iPseU_CNN:0.999916791915894;iRNA_PseU:0 4125 chr8 105261789 105261789 1 + G T LGG 105261789 + 105261769 105261809 41 TCCGGGCCCGTGGCCTTGTTGTAAAACCAGGTTCCAAGACA TCCGGGCCCGTGGCCTTGTTTTAAAACCAGGTTCCAAGACA Direct Gain 0 0.954940496017027 0 0.983541429042816 prediction 0.909880992034054 Functional Gain - RIMS2 ENSG00000176406 CDS Human protein_coding chr8:105261789 chr8:105261789 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_105165 0 0 0 0 2 Cytosol 0 0.438718592995036 0.967082858085632 0 hPsi_site_4125 iPseU_CNN:0.967082858085632;iRNA_PseU:0 4126 chr16 30978303 30978303 1 + G A SARC 30978303 - 30978283 30978323 41 ATGCCCGTAGTGCCCCCGCTCTTGGCCCAGTCCACGAGGGA ATGCCCGTAGTGCCCCCGCTTTTGGCCCAGTCCACGAGGGA Direct Gain 0 0.954940068704283 0 0.999956965446472 prediction 0.909880137408566 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30978303 chr16:30978303 synonymous SNV . 0 21 hPsi_associated_SNPs_105166 0 0 0 0 0 Cytosol 0 0.438721083312356 0.999913930892944 0 hPsi_site_4126 iPseU_CNN:0.999913930892944;iRNA_PseU:0 4127 chr22 30642436 30642436 1 + C T rs373862134 30642436 + 30642416 30642456 41 GAAGAGGAGGAGGAGGAAGGCTCGGCGCCCCCTCCCTCGCC GAAGAGGAGGAGGAGGAAGGTTCGGCGCCCCCTCCCTCGCC Direct Gain 0 0.954933823053706 0 0.999997735023499 prediction 0.909867646107412 Functional Gain - LIF ENSG00000268812 ncRNA_exonic Human antisense chr22:30642436 chr22:30642436 . . 0 21 hPsi_associated_SNPs_105167 0 0 0 0 0 exosome 0 0.438718512764001 0.999995470046998 0 hPsi_site_4127 iPseU_CNN:0.999995470046998;iRNA_PseU:0 4128 chr9 128088795 128088795 1 + G A SKCM 128088795 - 128088775 128088815 41 AAGACGTCTGTACTCCAGGTCTCACTCACTGTTTCTGATAT AAGACGTCTGTACTCCAGGTTTCACTCACTGTTTCTGATAT Direct Gain 0 0.954932731796056 0 0.820536732673645 prediction 0.909865463592113 Functional Gain - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128088795 chr9:128088795 synonymous SNV . 0 21 hPsi_associated_SNPs_105168 0 0 0 0 0 Nucleus 0 0.437520168212684 0.64107346534729 0 hPsi_site_4128 iPseU_CNN:0.64107346534729;iRNA_PseU:0 4129 chr1 158576545 158576545 1 + C T THYM 158576545 + 158576525 158576565 41 CCAGATGTTCTTTTCTGCCTCATGGGCCTGTACTAACTGCT CCAGATGTTCTTTTCTGCCTTATGGGCCTGTACTAACTGCT Direct Gain 0 0.954929534167315 0 0.8772794008255 prediction 0.909859068334629 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576545 chr1:158576545 nonsynonymous SNV 0.232 0 21 hPsi_associated_SNPs_105169 0 0 0 0 0 unknown 0 0.438718957051826 0.754558801651 0 hPsi_site_4129 iPseU_CNN:0.754558801651;iRNA_PseU:0 4130 chr19 42794579 42794579 1 + C T UCEC 42794579 + 42794559 42794599 41 GCCACCTCCTTCTCACTGGGCTCAGGAACCTTCAAGGCCCA GCCACCTCCTTCTCACTGGGTTCAGGAACCTTCAAGGCCCA Direct Gain 0 0.954927359873946 0 0.99975049495697 prediction 0.909854719747892 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42794579 chr19:42794579 synonymous SNV . 0 21 hPsi_associated_SNPs_105170 0 0 1 0 0 Cytosol 0 0.438719981240053 0.99950098991394 0 hPsi_site_4130 iPseU_CNN:0.99950098991394;iRNA_PseU:0 4131 chr14 74371761 74371761 1 + G A ESCA 74371761 - 74371741 74371781 41 TGGATGCGCCGGTGGTTCTTCAGGTTTCCAGCTGTAGTAAA TGGATGCGCCGGTGGTTCTTTAGGTTTCCAGCTGTAGTAAA Direct Gain 0 0.954925562768522 0 0.999711573123932 prediction 0.909851125537045 Functional Gain - ZNF410 ENSG00000119725 CDS Human protein_coding chr14:74371761 chr14:74371761 synonymous SNV . 0 21 hPsi_associated_SNPs_105171 0 0 0 0 0 Cytosol 0 0.438717955522945 0.999423146247864 0 hPsi_site_4131 iPseU_CNN:0.999423146247864;iRNA_PseU:0 4132 chr11 33308010 33308010 1 + C T LUAD 33308010 + 33307990 33308030 41 ATATGTTTATCAAACTCAGTCAAGTGCCTTTTGTAGTGTGA ATATGTTTATCAAACTCAGTTAAGTGCCTTTTGTAGTGTGA Direct Gain 0 0.954918938659997 0 0.949726939201355 prediction 0.909837877319994 Functional Gain - HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33308010 chr11:33308010 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105172 0 0 1 0 1 Cytosol 0 0.438260180863232 0.89945387840271 0 hPsi_site_4132 iPseU_CNN:0.89945387840271;iRNA_PseU:0 4133 chr18 51888230 51888230 1 + T A STAD 51888230 - 51888210 51888250 41 TAGGGTCCTTGAAAATGTGGATTCTTCTCAATGTCCAATGA TAGGGTCCTTGAAAATGTGGTTTCTTCTCAATGTCCAATGA Direct Gain 0 0.954918603889014 0 0.775457859039307 prediction 0.909837207778028 Functional Gain - C18orf54 ENSG00000166845 CDS Human protein_coding chr18:51888230 chr18:51888230 nonsynonymous SNV 0.054 0 21 hPsi_associated_SNPs_105173 0 0 0 0 0 chromatin 0 0.438718595078941 0.550915718078614 0 hPsi_site_4133 iPseU_CNN:0.550915718078614;iRNA_PseU:0 4134 chr8 120430401 120430401 1 + T A COAD 120430401 - 120430381 120430421 41 TGACAGCGGGGCACACAGCCAATCTGCCCATCTCTGCAGGT TGACAGCGGGGCACACAGCCTATCTGCCCATCTCTGCAGGT Direct Gain 0 0.954914748518931 0 0.486188292503357 prediction 0.909829497037862 Functional Gain - NOV ENSG00000136999 CDS Human protein_coding chr8:120430401 chr8:120430401 synonymous SNV . 0 21 hPsi_associated_SNPs_105174 0 0 0 0 0 exosome 0 0.438737023653873 0 0 hPsi_site_4134 iPseU_CNN:0;iRNA_PseU:0 4135 chr19 39019632 39019632 1 + G T UCEC 39019632 + 39019612 39019652 41 GAGGAGGAAGAGGTGGAAGAGAAGAAGCCAGACCCCCTGCA GAGGAGGAAGAGGTGGAAGATAAGAAGCCAGACCCCCTGCA Direct Gain 0 0.954908596232221 0 0.464226752519608 prediction 0.909817192464442 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:39019632 chr19:39019632 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_105175 0 0 0 0 2 chromatin 0 0.438718594770991 0 0 hPsi_site_4135 iPseU_CNN:0;iRNA_PseU:0 4136 chr12 27575798 27575798 1 + C T rs191491395 27575798 + 27575778 27575818 41 GCCTCAAAAGCAGATGGGGGCAGACTTGCCCTCGTGATGCC GCCTCAAAAGCAGATGGGGGTAGACTTGCCCTCGTGATGCC Direct Gain 0 0.954908460997697 0 0.999830603599548 prediction 0.909816921995393 Functional Gain - ARNTL2-AS1 ENSG00000245311 ncRNA_intronic Human antisense chr12:27575798 chr12:27575798 . . 0 21 hPsi_associated_SNPs_105176 0 0 0 0 0 unknown 0 0.438719205670144 0.999661207199096 0 hPsi_site_4136 iPseU_CNN:0.999661207199096;iRNA_PseU:0 4137 chr22 38463714 38463714 1 + G T SKCM 38463714 + 38463694 38463734 41 GTGTGCTGCTCTTCCAGGGGGAGGTGACCATCCACTACAAC GTGTGCTGCTCTTCCAGGGGTAGGTGACCATCCACTACAAC Direct Gain 0 0.95490306381964 0 0.997665524482727 prediction 0.909806127639279 Functional Gain - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38463714 chr22:38463714 stopgain 0.959 1 21 hPsi_associated_SNPs_105177 0 0 1 0 2 Ribosome 0 0.438719515661698 0.995331048965454 0 hPsi_site_4137 iPseU_CNN:0.995331048965454;iRNA_PseU:0 4138 chr1 205492699 205492699 1 + C T BLCA 205492699 + 205492679 205492719 41 GGGGAGGAGCCGGGGCAGCTCTCCCCTGGCGTGCAGTTCCA GGGGAGGAGCCGGGGCAGCTTTCCCCTGGCGTGCAGTTCCA Direct Gain 0 0.954897451734939 0 0.977723479270935 prediction 0.909794903469877 Functional Gain - CDK18 ENSG00000117266 CDS Human protein_coding chr1:205492699 chr1:205492699 synonymous SNV . 0 21 hPsi_associated_SNPs_105178 0 0 1 0 2 nucleus 0 0.438707919936633 0.95544695854187 0 hPsi_site_4138 iPseU_CNN:0.95544695854187;iRNA_PseU:0 4139 chr7 45650025 45650025 1 + G A SKCM 45650025 - 45650005 45650045 41 GGCTTCAGGAAGTCCTCCTTCATCTCCATGGCAACGTTCCG GGCTTCAGGAAGTCCTCCTTTATCTCCATGGCAACGTTCCG Direct Gain 0 0.954888296975387 0 0.999872922897339 prediction 0.909776593950773 Functional Gain - ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45650025 chr7:45650025 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105179 0 0 0 0 0 Nucleus 0 0.438718695977676 0.999745845794678 0 hPsi_site_4139 iPseU_CNN:0.999745845794678;iRNA_PseU:0 4140 chr1 201282324 201282324 1 + G T LIHC 201282324 + 201282304 201282344 41 GAACCCTCAAGCGGGAGCCTGACAACAGGCGCTTCAGCTCC GAACCCTCAAGCGGGAGCCTTACAACAGGCGCTTCAGCTCC Direct Gain 0 0.954888146841578 0 0.999606013298035 prediction 0.909776293683156 Functional Gain - PKP1 ENSG00000081277 CDS Human protein_coding chr1:201282324 chr1:201282324 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_105180 0 0 0 0 1 exosome 0 0.438719277301415 0.99921202659607 0 hPsi_site_4140 iPseU_CNN:0.99921202659607;iRNA_PseU:0 4141 chr6 2272374 2272374 1 + G A rs576653295 2272374 - 2272354 2272394 41 TTTGTTACCGGAAAAAGGGTCTTATCCCAGATGCCAAGAGT TTTGTTACCGGAAAAAGGGTTTTATCCCAGATGCCAAGAGT Direct Gain 0 0.954877983128532 0 0.303707361221313 prediction 0.909755966257065 Functional Gain - GMDS-AS1 ENSG00000250903 ncRNA_exonic Human lincRNA chr6:2272374 chr6:2272374 . . 0 21 hPsi_associated_SNPs_105181 0 0 0 0 0 unknown 0 0.438716236551264 0 0 hPsi_site_4141 iPseU_CNN:0;iRNA_PseU:0 4142 chr20 61467832 61467832 1 + G T THYM 61467832 + 61467812 61467852 41 GTGTGGGGTGAATTCCAGGGGAAGGAGGCCAGCGAGCAGCG GTGTGGGGTGAATTCCAGGGTAAGGAGGCCAGCGAGCAGCG Direct Gain 0 0.954863724890392 0 0.99395340681076 prediction 0.909727449780785 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61467832 chr20:61467832 synonymous SNV . 0 21 hPsi_associated_SNPs_105182 0 0 1 0 2 Cytosol 0 0.438718327913336 0.98790681362152 0 hPsi_site_4142 iPseU_CNN:0.98790681362152;iRNA_PseU:0 4143 chr17 79410148 79410148 1 + C T rs374395535 79410148 + 79410128 79410168 41 GGTGTCCAGGCAGGCCAGGGCACCGCCATGGCCATCAGCGA GGTGTCCAGGCAGGCCAGGGTACCGCCATGGCCATCAGCGA Direct Gain 0 0.954859468713527 0 0.970450460910797 prediction 0.909718937427054 Functional Gain - BAHCC1 ENSG00000171282 CDS Human other chr17:79410148 chr17:79410148 synonymous SNV . 0 21 hPsi_associated_SNPs_105183 0 0 0 0 0 chromatin 0 0.432439912060359 0.940900921821594 0 hPsi_site_4143 iPseU_CNN:0.940900921821594;iRNA_PseU:0 4144 chr17 48586017 48586017 1 + C T BLCA 48586017 + 48585997 48586037 41 GGCGGTGCAGGGCAACGTTTCATGGTGCCGGGCGGCACCAT GGCGGTGCAGGGCAACGTTTTATGGTGCCGGGCGGCACCAT Direct Gain 0 0.954853626783943 0 0.987568140029907 prediction 0.909707253567887 Functional Gain - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48586017 chr17:48586017 synonymous SNV . 0 21 hPsi_associated_SNPs_105184 0 0 0 0 1 exosome 0 0.438718594243022 0.975136280059814 0 hPsi_site_4144 iPseU_CNN:0.975136280059814;iRNA_PseU:0 4145 chr1 220928441 220928441 1 + C T BLCA 220928441 + 220928421 220928461 41 GCCTAGCAAGCAGCCTTCCTCAAACAAACTCCACAACTGCA GCCTAGCAAGCAGCCTTCCTTAAACAAACTCCACAACTGCA Direct Gain 0 0.954852414301948 0 0.98628830909729 prediction 0.909704828603895 Functional Gain - MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928441 chr1:220928441 nonsynonymous SNV 0.077 0 21 hPsi_associated_SNPs_105185 0 0 1 0 1 nucleus 0 0.437841359659867 0.97257661819458 0 hPsi_site_4145 iPseU_CNN:0.97257661819458;iRNA_PseU:0 4146 chr1 196712671 196712671 1 + T A LUSC 196712671 - 196712651 196712691 41 ATAAGGGCTCCTACATTGATAACGTACTCTCTCACCAGATG ATAAGGGCTCCTACATTGATTACGTACTCTCTCACCAGATG Direct Gain 0 0.954850221300309 0 0.985442519187927 prediction 0.909700442600618 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196712671 chr1:196712671 nonsynonymous SNV 0.038 3 21 hPsi_associated_SNPs_105186 0 0 0 0 0 chromatin 0 0.440788421831856 0.970885038375854 0 hPsi_site_4146 iPseU_CNN:0.970885038375854;iRNA_PseU:0 4147 chr10 86004855 86004855 1 + G T UCEC 86004855 + 86004835 86004875 41 GGGAGAGTGAGGATGGCAGAGACCAGTGCCCTGCCCACTGG GGGAGAGTGAGGATGGCAGATACCAGTGCCCTGCCCACTGG Direct Gain 0 0.954848965921118 0 0.677863478660583 prediction 0.909697931842236 Functional Gain - RGR ENSG00000148604 CDS Human protein_coding chr10:86004855 chr10:86004855 nonsynonymous SNV 0.020 1 21 hPsi_associated_SNPs_105187 0 0 0 0 1 unknown 0 0.438719846673807 0.355726957321166 0 hPsi_site_4147 iPseU_CNN:0.355726957321166;iRNA_PseU:0 4148 chr4 69343178 69343178 1 + G A SKCM 69343178 - 69343158 69343198 41 TGATGGGTGTTTGTATTTTTCATGGACAATTATTCTCCGGA TGATGGGTGTTTGTATTTTTTATGGACAATTATTCTCCGGA Direct Gain 0 0.954834803263241 0 0.298655092716217 prediction 0.909669606526483 Functional Gain - TMPRSS11E ENSG00000087128 CDS Human protein_coding chr4:69343178 chr4:69343178 nonsynonymous SNV 0.886 1 21 hPsi_associated_SNPs_105188 0 0 0 0 0 exosome 0 0.438718592130274 0 0 hPsi_site_4148 iPseU_CNN:0;iRNA_PseU:0 4149 chr16 24802935 24802935 1 + C A OV 24802935 - 24802915 24802955 41 TGCGACGTATAGATTCTGGGGATGGTTCCTCCCAGCCTGTG TGCGACGTATAGATTCTGGGTATGGTTCCTCCCAGCCTGTG Direct Gain 0 0.954831487624026 0 0.999419093132019 prediction 0.909662975248053 Functional Gain - TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24802935 chr16:24802935 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105189 0 0 0 0 0 Nucleus 0 0.438718458127332 0.998838186264038 0 hPsi_site_4149 iPseU_CNN:0.998838186264038;iRNA_PseU:0 4150 chr1 116569575 116569575 1 + C T SKCM 116569575 + 116569555 116569595 41 TATGCCCTGTTAGGATACTTCATCCGCTCCTGGAGGACCCT TATGCCCTGTTAGGATACTTTATCCGCTCCTGGAGGACCCT Direct Gain 0 0.954829241995724 0 0.999016880989075 prediction 0.909658483991448 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116569575 chr1:116569575 synonymous SNV . 0 21 hPsi_associated_SNPs_105190 0 0 1 0 2 cytosol 0 0.438718592997546 0.99803376197815 0 hPsi_site_4150 iPseU_CNN:0.99803376197815;iRNA_PseU:0 4151 chr1 109285207 109285207 1 + G A rs143411388 109285207 - 109285187 109285227 41 GTTTGAGGCTCTCCATTTGACATCTTCTCTCATGCAGAAAG GTTTGAGGCTCTCCATTTGATATCTTCTCTCATGCAGAAAG Direct Gain 0 0.954829120798007 0 0.845286965370178 prediction 0.909658241596014 Functional Gain - FNDC7 ENSG00000143107 UTR3 Human protein_coding chr1:109285207 chr1:109285207 . . 0 21 hPsi_associated_SNPs_105191 0 0 0 0 0 exosome 0 0.438718908314873 0.690573930740356 0 hPsi_site_4151 iPseU_CNN:0.690573930740356;iRNA_PseU:0 4152 chr19 24310636 24310636 1 + T A SKCM 24310636 - 24310616 24310656 41 AGTTAGGGTTGAGGACCAGAAAAATGCTTTGCCACATTCTT AGTTAGGGTTGAGGACCAGATAAATGCTTTGCCACATTCTT Direct Gain 0 0.95482220994339 0 0.999986350536346 prediction 0.90964441988678 Functional Gain - ZNF254 ENSG00000213096 CDS Human protein_coding chr19:24310636 chr19:24310636 nonsynonymous SNV 0.547 0 21 hPsi_associated_SNPs_105192 0 0 0 0 0 chromatin 0 0.438718592949843 0.999972701072692 0 hPsi_site_4152 iPseU_CNN:0.999972701072692;iRNA_PseU:0 4153 chr19 6366307 6366307 1 + C A BLCA 6366307 - 6366287 6366327 41 AGCTGCTTCTTGAGCTTCATGATCTCCTCTGCCTGGATGGC AGCTGCTTCTTGAGCTTCATTATCTCCTCTGCCTGGATGGC Direct Gain 0 0.954818688433581 0 0.414087623357773 prediction 0.909637376867161 Functional Gain - CLPP ENSG00000125656 CDS Human protein_coding chr19:6366307 chr19:6366307 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_105193 0 0 0 0 0 Cytosol 0 0.438750983410511 0 0 hPsi_site_4153 iPseU_CNN:0;iRNA_PseU:0 4154 chr16 81314496 81314496 1 + C T rs7501331 81314496 + 81314476 81314516 41 CACAAATTTAATCAAAGTGGCATCTACAACAGCCACGGCCC CACAAATTTAATCAAAGTGGTATCTACAACAGCCACGGCCC Direct Gain 0 0.954816480860452 0 0.993990898132324 prediction 0.909632961720904 Functional Gain - BCO1 ENSG00000135697 CDS Human protein_coding chr16:81314496 chr16:81314496 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105194 0 0 0 0 2 exosome 0 0.438719209213022 0.987981796264648 0 hPsi_site_4154 iPseU_CNN:0.987981796264648;iRNA_PseU:0 4155 chr14 55510796 55510796 1 + C T UCEC 55510796 + 55510776 55510816 41 TCACAACTTTAGCTTTGATGCACATGACCCCTGTGTCTTCC TCACAACTTTAGCTTTGATGTACATGACCCCTGTGTCTTCC Direct Gain 0 0.954812820672711 0 0.999420821666718 prediction 0.909625641345422 Functional Gain - SOCS4 ENSG00000180008 CDS Human protein_coding chr14:55510796 chr14:55510796 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105195 0 0 1 0 0 Cytosol 0 0.438718943312889 0.998841643333436 0 hPsi_site_4155 iPseU_CNN:0.998841643333436;iRNA_PseU:0 4156 chr8 145583888 145583888 1 + G A COAD 145583888 - 145583868 145583908 41 CTCTTGCAGTGGTGAGGACTCTTCCACCTCTTCCTCTGCTC CTCTTGCAGTGGTGAGGACTTTTCCACCTCTTCCTCTGCTC Direct Gain 0 0.95480555993558 0 0.983272314071655 prediction 0.90961111987116 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583888 chr8:145583888 nonsynonymous SNV 0.757 1 21 hPsi_associated_SNPs_105196 0 0 0 0 0 Ribosome 0 0.439620058295111 0.96654462814331 0 hPsi_site_4156 iPseU_CNN:0.96654462814331;iRNA_PseU:0 4157 chr2 202003767 202003767 1 + G A rs113350756 202003767 - 202003747 202003787 41 CCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTG CCTATGTCTACTTCTTTCTATACAGACACAGTAACAATCTG Direct Gain 0 0.954801650654017 0 0.999009490013123 prediction 0.909603301308034 Functional Gain - CFLAR ENSG00000232133 ncRNA_intronic Human processed_pseudogene chr2:202003767 chr2:202003767 . . 0 21 hPsi_associated_SNPs_105197 0 0 0 0 0 Cytosol 0 0.438718592912805 0.998018980026246 0 hPsi_site_4157 iPseU_CNN:0.998018980026246;iRNA_PseU:0 4158 chrX 21874636 21874636 1 + G A UCEC 21874636 - 21874616 21874656 41 ATCTGCCGGGATCTCCAGGTCTTGTGTGATGGAGAAATCTT ATCTGCCGGGATCTCCAGGTTTTGTGTGATGGAGAAATCTT Direct Gain 0 0.954788915851186 0 0.773820817470551 prediction 0.909577831702372 Functional Gain - YY2 ENSG00000230797 CDS Human protein_coding chrX:21874636 chrX:21874636 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_105198 0 0 0 0 0 exosome 0 0.438718597764879 0.547641634941102 0 hPsi_site_4158 iPseU_CNN:0.547641634941102;iRNA_PseU:0 4159 chr20 3543950 3543950 1 + G A LGG 3543950 - 3543930 3543970 41 GCCATGGCTCATAGATGTGTCATTGTGTGTGTTTCCTCCAA GCCATGGCTCATAGATGTGTTATTGTGTGTGTTTCCTCCAA Direct Gain 0 0.954783278160371 0 0.296116292476654 prediction 0.909566556320742 Functional Gain - ATRN ENSG00000088812 CDS Human protein_coding chr20:3543950 chr20:3543950 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105199 0 0 0 0 0 Ribosome 0 0.437107759857095 0 0 hPsi_site_4159 iPseU_CNN:0;iRNA_PseU:0 4160 chr4 100522814 100522814 1 + G A STAD 100522814 - 100522794 100522834 41 ACAAGTGTCCCAGTGATGATCATAACAGTTTCTCTGATGTC ACAAGTGTCCCAGTGATGATTATAACAGTTTCTCTGATGTC Direct Gain 0 0.954772542782731 0 0.941885352134705 prediction 0.909545085565462 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100522814 chr4:100522814 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105200 0 0 0 0 0 cytosol 0 0.443593269830055 0.88377070426941 0 hPsi_site_4160 iPseU_CNN:0.88377070426941;iRNA_PseU:0 4161 chr16 67645922 67645922 1 + C A BRCA 67645922 - 67645902 67645942 41 ATCAGTGTGGCTTTTCATGTGACGATCCAAATTTGAACGCC ATCAGTGTGGCTTTTCATGTTACGATCCAAATTTGAACGCC Direct Gain 0 0.954772088845452 0 0.999891579151154 prediction 0.909544177690904 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67645922 chr16:67645922 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_105201 0 0 0 0 0 Nucleus 0 0.438726584403162 0.999783158302308 0 hPsi_site_4161 iPseU_CNN:0.999783158302308;iRNA_PseU:0 4162 chr11 4903778 4903778 1 + C T SKCM 4903778 + 4903758 4903798 41 GCACTGACGTATTGTTTATTCTTTTCTCCTATGTCCTGATC GCACTGACGTATTGTTTATTTTTTTCTCCTATGTCCTGATC Direct Gain 0 0.954768751696286 0 0.590533494949341 prediction 0.909537503392573 Functional Gain - OR51T1 ENSG00000176900 CDS Human protein_coding chr11:4903778 chr11:4903778 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_105202 0 0 0 0 0 unknown 0 0.434016253715137 0.181066989898682 0 hPsi_site_4162 iPseU_CNN:0.181066989898682;iRNA_PseU:0 4163 chr8 97342498 97342498 1 + C A KIRC 97342498 - 97342478 97342518 41 CTTCCATACCTTTTCTCGGTGACCATAGTGTTCTGCATACC CTTCCATACCTTTTCTCGGTTACCATAGTGTTCTGCATACC Direct Gain 0 0.954765672756288 0 0.0396531522274017 prediction 0.909531345512576 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97342498 chr8:97342498 nonsynonymous SNV 0.921 1 21 hPsi_associated_SNPs_105203 0 0 0 0 0 Ribosome 0 0.43881439295595 0 0 hPsi_site_4163 iPseU_CNN:0;iRNA_PseU:0 4164 chr6 33652562 33652562 1 + G A SKCM 33652562 - 33652542 33652582 41 GGCTGCGATTGCCGACCAGTCTGGGTCCAGGCCTGGAGGCG GGCTGCGATTGCCGACCAGTTTGGGTCCAGGCCTGGAGGCG Direct Gain 0 0.954764577352545 0 0.999996542930603 prediction 0.90952915470509 Functional Gain - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652562 chr6:33652562 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_105204 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592973603 0.999993085861206 0 hPsi_site_4164 iPseU_CNN:0.999993085861206;iRNA_PseU:0 4165 chr8 100831085 100831085 1 + G A SKCM 100831085 - 100831065 100831105 41 TGTCAGGTGATGTACAAGGTCAGGTTCTATGTTTTGCAGTG TGTCAGGTGATGTACAAGGTTAGGTTCTATGTTTTGCAGTG Direct Gain 0 0.954761742731577 0 0.990705847740173 prediction 0.909523485463155 Functional Gain - VPS13B ENSG00000132549 CDS Human protein_coding chr8:100831085 chr8:100831085 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105205 0 0 0 0 0 Nucleus 0 0.434543218973406 0.981411695480346 0 hPsi_site_4165 iPseU_CNN:0.981411695480346;iRNA_PseU:0 4166 chr15 88796070 88796070 1 + C T rs114949103 88796070 + 88796050 88796090 41 GGGTGGAGGTGAGACCCACACTTATGCTCTGATGCCTTGCA GGGTGGAGGTGAGACCCACATTTATGCTCTGATGCCTTGCA Direct Gain 0 0.954754580223067 0 0.988872170448303 prediction 0.909509160446134 Functional Gain - NTRK3-AS1 ENSG00000260305 ncRNA_exonic Human lincRNA chr15:88796070 chr15:88796070 . . 0 21 hPsi_associated_SNPs_105206 0 0 0 0 0 unknown 0 0.438716263570091 0.977744340896606 0 hPsi_site_4166 iPseU_CNN:0.977744340896606;iRNA_PseU:0 4167 chr8 85834018 85834018 1 + C T rs569821750 85834018 + 85833998 85834038 41 GAAATGGAAGAAACCATCTTCACAGACCGTAGGAGAATTCA GAAATGGAAGAAACCATCTTTACAGACCGTAGGAGAATTCA Direct Gain 0 0.954753590967914 0 0.356896281242371 prediction 0.909507181935828 Functional Gain - RALYL ENSG00000184672 UTR3 Human protein_coding chr8:85834018 chr8:85834018 . . 0 21 hPsi_associated_SNPs_105207 0 0 0 0 0 exosome 0 0.439426363625324 0 0 hPsi_site_4167 iPseU_CNN:0;iRNA_PseU:0 4168 chr16 58545342 58545342 1 + G A SARC 58545342 - 58545322 58545362 41 CGGGAGCGTGCCAGGCGGGTCATGCTGGCTGAGGGCACTGT CGGGAGCGTGCCAGGCGGGTTATGCTGGCTGAGGGCACTGT Direct Gain 0 0.954747796214736 0 0.691601395606995 prediction 0.909495592429472 Functional Gain - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58545342 chr16:58545342 nonsynonymous SNV 0.986 3 21 hPsi_associated_SNPs_105208 0 0 0 0 0 Exosome 0 0.438581191275885 0.38320279121399 0 hPsi_site_4168 iPseU_CNN:0.38320279121399;iRNA_PseU:0 4169 chr9 130890988 130890988 1 + G A rs147075733 130890988 - 130890968 130891008 41 GCCAAGGTCGCTCCAGCAGTCTCCTCGGGTCACCCGCTTCC GCCAAGGTCGCTCCAGCAGTTTCCTCGGGTCACCCGCTTCC Direct Gain 0 0.9547469907205 0 0.999987244606018 prediction 0.909493981441 Functional Gain - PTGES2-AS1 ENSG00000232850 CDS Human lincRNA chr9:130890988 chr9:130890988 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105209 0 0 0 0 0 unknown 0 0.438681822519094 0.999974489212036 0 hPsi_site_4169 iPseU_CNN:0.999974489212036;iRNA_PseU:0 4170 chr7 121638051 121638051 1 + G T LUAD 121638051 + 121638031 121638071 41 TGATTGTCGACATGCCTACTGATAATCCTGGTAAGTGCCAC TGATTGTCGACATGCCTACTTATAATCCTGGTAAGTGCCAC Direct Gain 0 0.954746249228585 0 0.999999284744263 prediction 0.90949249845717 Functional Gain - PTPRZ1 ENSG00000106278 CDS Human protein_coding chr7:121638051 chr7:121638051 nonsynonymous SNV 0.036 1 21 hPsi_associated_SNPs_105210 0 0 0 0 1 exosome 0 0.43871824002128 0.999998569488526 0 hPsi_site_4170 iPseU_CNN:0.999998569488526;iRNA_PseU:0 4171 chr19 40276741 40276741 1 + G A rs147692654 40276741 - 40276721 40276761 41 GGAGCTGGTCATACTCAAGGCATACTGGAAAAAGATATTGA GGAGCTGGTCATACTCAAGGTATACTGGAAAAAGATATTGA Direct Gain 0 0.95473059514965 0 0.994624733924866 prediction 0.909461190299299 Functional Gain - LEUTX ENSG00000213921 CDS Human protein_coding chr19:40276741 chr19:40276741 nonsynonymous SNV 0.000 2 21 hPsi_associated_SNPs_105211 0 0 0 0 0 unknown 0 0.438718577362131 0.989249467849732 0 hPsi_site_4171 iPseU_CNN:0.989249467849732;iRNA_PseU:0 4172 chr10 104139678 104139678 1 + G A CESC 104139678 - 104139658 104139698 41 GTGGAAGCCCTCATCCGGGTCTCCTCCATCCCACCCACATC GTGGAAGCCCTCATCCGGGTTTCCTCCATCCCACCCACATC Direct Gain 0 0.954727653732748 0 0.996085166931152 prediction 0.909455307465497 Functional Gain - GBF1 ENSG00000107862 CDS Human protein_coding chr10:104139678 chr10:104139678 synonymous SNV . 0 21 hPsi_associated_SNPs_105212 0 0 0 0 0 Nucleus 0 0.438709912323657 0.992170333862304 0 hPsi_site_4172 iPseU_CNN:0.992170333862304;iRNA_PseU:0 4173 chr11 65481111 65481111 1 + G A ESCA 65481111 - 65481091 65481131 41 AAAACCGAGGCCGGGGCTGTCTCGCTGGGCACTGGAGTTGC AAAACCGAGGCCGGGGCTGTTTCGCTGGGCACTGGAGTTGC Direct Gain 0 0.954727244256144 0 0.145366817712784 prediction 0.909454488512288 Functional Gain - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65481111 chr11:65481111 synonymous SNV . 0 21 hPsi_associated_SNPs_105213 0 0 0 0 0 Cytosol 0 0.438718593007125 0 0 hPsi_site_4173 iPseU_CNN:0;iRNA_PseU:0 4174 chr3 172096176 172096176 1 + C T BLCA 172096176 + 172096156 172096196 41 GGCTGGAGAAGGGCCCTTCTCAGAAACCTATACCTTCAGCA GGCTGGAGAAGGGCCCTTCTTAGAAACCTATACCTTCAGCA Direct Gain 0 0.954725745748458 0 0.943612813949585 prediction 0.909451491496917 Functional Gain - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172096176 chr3:172096176 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_105214 0 0 1 0 1 Nucleus 0 0.438719233218055 0.88722562789917 0 hPsi_site_4174 iPseU_CNN:0.88722562789917;iRNA_PseU:0 4175 chr9 118950283 118950283 1 + G A SKCM 118950283 - 118950263 118950303 41 TTGCACTCGGGGTCACAGTTCTCATCCCCAATCTTGCTGAT TTGCACTCGGGGTCACAGTTTTCATCCCCAATCTTGCTGAT Direct Gain 0 0.954724511609349 0 0.999548316001892 prediction 0.909449023218698 Functional Gain - PAPPA ENSG00000182752 CDS Human protein_coding chr9:118950283 chr9:118950283 synonymous SNV . 0 21 hPsi_associated_SNPs_105215 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592641498 0.999096632003784 0 hPsi_site_4175 iPseU_CNN:0.999096632003784;iRNA_PseU:0 4176 chr3 126382175 126382175 1 + C T LUSC 126382175 + 126382155 126382195 41 TATTTCCTCCCCACTCAGGTCACCTCTGAGGGCAGCCCCCA TATTTCCTCCCCACTCAGGTTACCTCTGAGGGCAGCCCCCA Direct Gain 0 0.954724132386758 0 0.898722529411316 prediction 0.909448264773515 Functional Gain - NUP210P1 ENSG00000198284 ncRNA_exonic Human transcribed_processed_pseudogene chr3:126382175 chr3:126382175 . . 0 21 hPsi_associated_SNPs_105216 0 0 0 0 1 unknown 0 0.438718585021783 0.797445058822632 0 hPsi_site_4176 iPseU_CNN:0.797445058822632;iRNA_PseU:0 4177 chr1 207890949 207890949 1 + G T LGG 207890949 + 207890929 207890969 41 TGACCTTCAACCTCATTGGGGAGAGCACCATCCGCCGCACA TGACCTTCAACCTCATTGGGTAGAGCACCATCCGCCGCACA Direct Gain 0 0.954718404147121 0 0.984482049942017 prediction 0.909436808294243 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207890949 chr1:207890949 stopgain 0.267 0 21 hPsi_associated_SNPs_105217 0 0 0 0 0 Endoplasmic reticulum 0 0.438717508847283 0.968964099884034 0 hPsi_site_4177 iPseU_CNN:0.968964099884034;iRNA_PseU:0 4178 chr17 80196738 80196738 1 + G A LUSC 80196738 - 80196718 80196758 41 TCTGCAGGAGGCTTGTGGAGCTTCTCCTCCTCCGCGGCCGC TCTGCAGGAGGCTTGTGGAGTTTCTCCTCCTCCGCGGCCGC Direct Gain 0 0.954717579084048 0 0.999992966651917 prediction 0.909435158168096 Functional Gain - SLC16A3 ENSG00000141526 CDS Human protein_coding chr17:80196738 chr17:80196738 synonymous SNV . 0 21 hPsi_associated_SNPs_105218 0 0 0 0 0 Ribosome 0 0.438718593063369 0.999985933303834 0 hPsi_site_4178 iPseU_CNN:0.999985933303834;iRNA_PseU:0 4179 chr17 18682533 18682533 1 + C A LGG 18682533 - 18682513 18682553 41 TTATCAATAGGCAGGCCTTTGATCTTCCTGATCCATGCAGC TTATCAATAGGCAGGCCTTTTATCTTCCTGATCCATGCAGC Direct Gain 0 0.954714597247635 0 0.977574169635773 prediction 0.909429194495269 Functional Gain - FBXW10 ENSG00000171931 CDS Human protein_coding chr17:18682533 chr17:18682533 synonymous SNV . 0 21 hPsi_associated_SNPs_105219 0 0 0 0 0 Nucleus 0 0.438711451966084 0.955148339271546 0 hPsi_site_4179 iPseU_CNN:0.955148339271546;iRNA_PseU:0 4180 chr3 124458996 124458996 1 + G T BLCA 124458996 + 124458976 124459016 41 GGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCTCC GGGGGTGCCTCCTTATTGCGTAAATGAGCTCCACCGGCTCC Direct Gain 0 0.954712409853902 0 0.999410510063171 prediction 0.909424819707805 Functional Gain - UMPS ENSG00000114491 CDS Human protein_coding chr3:124458996 chr3:124458996 stopgain 0.989 1 21 hPsi_associated_SNPs_105220 0 0 1 0 1 Ribosome 0 0.43871846445232 0.998821020126342 0 hPsi_site_4180 iPseU_CNN:0.998821020126342;iRNA_PseU:0 4181 chr12 93968915 93968915 1 + G A SARC 93968915 - 93968895 93968935 41 CTTCCAAGTAATCTTTTAGTCTTGTTGGTAAAGGCAGTCCC CTTCCAAGTAATCTTTTAGTTTTGTTGGTAAAGGCAGTCCC Direct Gain 0 0.954711119607821 0 0.985702395439148 prediction 0.909422239215642 Functional Gain - SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968915 chr12:93968915 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105221 0 0 0 0 0 Ribosome 0 0.438718608673647 0.971404790878296 0 hPsi_site_4181 iPseU_CNN:0.971404790878296;iRNA_PseU:0 4182 chr12 81545798 81545798 1 + G A LUSC 81545798 - 81545778 81545818 41 TCCAACAACCCAGCCTAAGTCAGAAGCTGCCCACCACACCT TCCAACAACCCAGCCTAAGTTAGAAGCTGCCCACCACACCT Direct Gain 0 0.954710345290751 0 0.995497345924377 prediction 0.909420690581503 Functional Gain - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81545798 chr12:81545798 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105222 0 0 0 0 0 cytosol 0 0.438714971224063 0.990994691848754 0 hPsi_site_4182 iPseU_CNN:0.990994691848754;iRNA_PseU:0 4183 chr15 85189529 85189529 1 + G T COAD 85189529 + 85189509 85189549 41 GACGGCCACCCTAGGCCAGAGACTCTCCTCTTTCTCATGCA GACGGCCACCCTAGGCCAGATACTCTCCTCTTTCTCATGCA Direct Gain 0 0.954705410545556 0 0.547423839569092 prediction 0.909410821091112 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85189529 chr15:85189529 nonsynonymous SNV 0.838 2 21 hPsi_associated_SNPs_105223 0 0 0 0 0 Cytosol 0 0.435510902812506 0.094847679138184 0 hPsi_site_4183 iPseU_CNN:0.094847679138184;iRNA_PseU:0 4184 chrX 21875700 21875700 1 + G A LIHC 21875700 - 21875680 21875720 41 CACGGGTTGTTTTTGGTCTTCACATGCGTTAATATGTGGGT CACGGGTTGTTTTTGGTCTTTACATGCGTTAATATGTGGGT Direct Gain 0 0.954699327354283 0 0.999951481819153 prediction 0.909398654708567 Functional Gain - YY2 ENSG00000230797 CDS Human protein_coding chrX:21875700 chrX:21875700 synonymous SNV . 0 21 hPsi_associated_SNPs_105224 0 0 0 0 0 exosome 0 0.43960521681377 0.999902963638306 0 hPsi_site_4184 iPseU_CNN:0.999902963638306;iRNA_PseU:0 4185 chr8 105261767 105261767 1 + C T LUSC 105261767 + 105261747 105261787 41 GGACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCCTTGT GGACAGCTGGAGGTAGAAATTATCCGGGCCCGTGGCCTTGT Direct Gain 0 0.954698516069452 0 0.916943907737732 prediction 0.909397032138905 Functional Gain - RIMS2 ENSG00000176406 CDS Human protein_coding chr8:105261767 chr8:105261767 synonymous SNV . 0 21 hPsi_associated_SNPs_105225 0 0 0 0 2 Cytosol 0 0.438718592995102 0.833887815475464 0 hPsi_site_4185 iPseU_CNN:0.833887815475464;iRNA_PseU:0 4186 chr15 90800449 90800449 1 + C T rs2063743 90800449 + 90800429 90800469 41 TGACCCTCTCCGGATCTTCACATATGAGGAGGGCCTAGCCC TGACCCTCTCCGGATCTTCATATATGAGGAGGGCCTAGCCC Direct Gain 0 0.95469636068064 0 0.999806046485901 prediction 0.90939272136128 Functional Gain - TTLL13P ENSG00000213471;ENSG00000261147 CDS Human other chr15:90800449 chr15:90800449 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105226 0 0 0 0 2 unknown 0 0.438718593185693 0.999612092971802 0 hPsi_site_4186 iPseU_CNN:0.999612092971802;iRNA_PseU:0 4187 chr19 2229294 2229294 1 + C T rs140245891 2229294 + 2229274 2229314 41 GCGTGCCTGGCGGCGTAGTGCAAAGGTGCCCTCTGCTTGCC GCGTGCCTGGCGGCGTAGTGTAAAGGTGCCCTCTGCTTGCC Direct Gain 0 0.954695243331951 0 0.999008774757385 prediction 0.909390486663902 Functional Gain - DOT1L ENSG00000104885 intronic Human protein_coding chr19:2229294 chr19:2229294 . . 0 21 hPsi_associated_SNPs_105227 0 0 1 0 0 Cytosol 0 0.4386994109758 0.99801754951477 0 hPsi_site_4187 iPseU_CNN:0.99801754951477;iRNA_PseU:0 4188 chr2 97356256 97356256 1 + G A ESCA 97356256 - 97356236 97356276 41 TGCCAGCCTTGGGGGCACTTCACGTTCTCCCGGGCCTCCAT TGCCAGCCTTGGGGGCACTTTACGTTCTCCCGGGCCTCCAT Direct Gain 0 0.95469012942854 0 1 prediction 0.90938025885708 Functional Gain - FER1L5 ENSG00000249715 ncRNA_exonic Human protein_coding chr2:97356256 chr2:97356256 . . 0 21 hPsi_associated_SNPs_105228 0 0 0 0 0 exosome 0 0.438718441600104 1 0 hPsi_site_4188 iPseU_CNN:1;iRNA_PseU:0 4189 chr22 45689120 45689120 1 + C T LUSC 45689120 + 45689100 45689140 41 CGGAGCGGAGGCATGATCGTCATCACTTCCATCCTGGGCTC CGGAGCGGAGGCATGATCGTTATCACTTCCATCCTGGGCTC Direct Gain 0 0.954689704385126 0 0.999480724334717 prediction 0.909379408770253 Functional Gain - UPK3A ENSG00000100373 CDS Human protein_coding chr22:45689120 chr22:45689120 synonymous SNV . 0 21 hPsi_associated_SNPs_105229 0 0 0 0 2 exosome 0 0.438741117756684 0.998961448669434 0 hPsi_site_4189 iPseU_CNN:0.998961448669434;iRNA_PseU:0 4190 chr3 151082914 151082914 1 + C A OV 151082914 - 151082894 151082934 41 CGATTGGCCGCATTGTCACTGAGGATCTTGCCCAGCATTGA CGATTGGCCGCATTGTCACTTAGGATCTTGCCCAGCATTGA Direct Gain 0 0.954689046500437 0 0.970813930034637 prediction 0.909378093000875 Functional Gain - MED12L ENSG00000144893 CDS Human protein_coding chr3:151082914 chr3:151082914 synonymous SNV . 0 21 hPsi_associated_SNPs_105230 0 0 0 0 0 exosome 0 0.438640777114569 0.941627860069274 0 hPsi_site_4190 iPseU_CNN:0.941627860069274;iRNA_PseU:0 4191 chr6 43033394 43033394 1 + G T COAD 43033394 + 43033374 43033414 41 ATGCCACCAAGGATTCCCTGGATGACCTCTTTCCTAATGAG ATGCCACCAAGGATTCCCTGTATGACCTCTTTCCTAATGAG Direct Gain 0 0.954688871416153 0 0.979415655136108 prediction 0.909377742832306 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43033394 chr6:43033394 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105231 0 0 1 0 2 Cytosol 0 0.43871861844425 0.958831310272216 0 hPsi_site_4191 iPseU_CNN:0.958831310272216;iRNA_PseU:0 4192 chr20 60504806 60504806 1 + C A BLCA 60504806 - 60504786 60504826 41 ATGGTGGTGCAGTCCCCGTTGTCATCACATGGGCACACCTT ATGGTGGTGCAGTCCCCGTTTTCATCACATGGGCACACCTT Direct Gain 0 0.95468863416575 0 0.999856770038605 prediction 0.9093772683315 Functional Gain - CDH4 ENSG00000179242 CDS Human protein_coding chr20:60504806 chr20:60504806 nonsynonymous SNV 0.738 0 21 hPsi_associated_SNPs_105232 0 0 0 0 0 exosome 0 0.438702262845612 0.99971354007721 0 hPsi_site_4192 iPseU_CNN:0.99971354007721;iRNA_PseU:0 4193 chr5 140562967 140562967 1 + C T SKCM 140562967 + 140562947 140562987 41 CGGAGCCAATGGAAAAATATCATACACACTCTTTCAGCCTT CGGAGCCAATGGAAAAATATTATACACACTCTTTCAGCCTT Direct Gain 0 0.954687639983566 0 0.201801747083664 prediction 0.909375279967131 Functional Gain - PCDHB16 ENSG00000196963 CDS Human other chr5:140562967 chr5:140562967 nonsynonymous SNV 0.025 0 21 hPsi_associated_SNPs_105233 0 0 0 0 0 Nucleus 0 0.438448699087638 0 0 hPsi_site_4193 iPseU_CNN:0;iRNA_PseU:0 4194 chrX 147018109 147018109 1 + G A SARC 147018109 - 147018089 147018129 41 TTCTTGTGGAACATTTTTCTCATTTTCAGCCTCAATCCTCA TTCTTGTGGAACATTTTTCTTATTTTCAGCCTCAATCCTCA Direct Gain 0 0.954685877026797 0 0.992961406707764 prediction 0.909371754053594 Functional Gain - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147018109 chrX:147018109 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105234 0 0 0 0 0 Cytosol 0 0.438729638478502 0.985922813415528 0 hPsi_site_4194 iPseU_CNN:0.985922813415528;iRNA_PseU:0 4195 chr11 89896721 89896721 1 + C A LUAD 89896721 - 89896701 89896741 41 CCCAGCTGGCAAAAATGATAGTTCTTCTAGGTCTCCAGCCT CCCAGCTGGCAAAAATGATATTTCTTCTAGGTCTCCAGCCT Direct Gain 0 0.954685344850356 0 0.600587904453278 prediction 0.909370689700711 Functional Gain - NAALAD2 ENSG00000077616 CDS Human protein_coding chr11:89896721 chr11:89896721 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105235 0 0 0 0 0 insoluble cytoplasm 0 0.438718587617634 0.201175808906556 0 hPsi_site_4195 iPseU_CNN:0.201175808906556;iRNA_PseU:0 4196 chr19 9958804 9958804 1 + G A rs138056875 9958804 - 9958784 9958824 41 TTGCGCACCTCTGCTGAAGGCACCCAGGTCTCCCCTGGCCT TTGCGCACCTCTGCTGAAGGTACCCAGGTCTCCCCTGGCCT Direct Gain 0 0.954684615026527 0 0.993124186992645 prediction 0.909369230053053 Functional Gain - PIN1 ENSG00000127445 CDS Human protein_coding chr19:9958804 chr19:9958804 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_105236 0 0 0 0 0 Ribosome 0 0.438718596318956 0.98624837398529 0 hPsi_site_4196 iPseU_CNN:0.98624837398529;iRNA_PseU:0 4197 chr10 13652141 13652141 1 + G T BLCA 13652141 + 13652121 13652161 41 GAGAGGAAGACACACAGAATGATCTGAAAGTTCATGAGGAA GAGAGGAAGACACACAGAATTATCTGAAAGTTCATGAGGAA Direct Gain 0 0.954682339822245 0 0.917686820030212 prediction 0.909364679644489 Functional Gain - PRPF18 ENSG00000165630;ENSG00000239665 CDS Human other chr10:13652141 chr10:13652141 nonsynonymous SNV 0.987 4 21 hPsi_associated_SNPs_105237 0 0 1 0 1 Cytosol 0 0.438528546072091 0.835373640060424 0 hPsi_site_4197 iPseU_CNN:0.835373640060424;iRNA_PseU:0 4198 chr12 104714905 104714905 1 + G A SARC 104714905 - 104714885 104714925 41 GATGCTCCAACAACCAGGGTCTTACCCGGGCAGTAAGGCAA GATGCTCCAACAACCAGGGTTTTACCCGGGCAGTAAGGCAA Direct Gain 0 0.954675197481906 0 0.994488716125488 prediction 0.909350394963811 Functional Gain - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104714905 chr12:104714905 synonymous SNV . 0 21 hPsi_associated_SNPs_105238 0 0 0 0 0 Ribosome 0 0.438718175381944 0.988977432250976 0 hPsi_site_4198 iPseU_CNN:0.988977432250976;iRNA_PseU:0 4199 chr1 153233476 153233476 1 + G T TGCT 153233476 + 153233456 153233496 41 CAGCCCCCAGTGGACTGCGTGAAGACCTCTGGCGGCGGTGG CAGCCCCCAGTGGACTGCGTTAAGACCTCTGGCGGCGGTGG Direct Gain 0 0.954669518095312 0 0.993601083755493 prediction 0.909339036190624 Functional Gain - LOR ENSG00000203782 CDS Human protein_coding chr1:153233476 chr1:153233476 synonymous SNV . 0 21 hPsi_associated_SNPs_105239 0 0 0 0 1 exosome 0 0.438718663600275 0.987202167510986 0 hPsi_site_4199 iPseU_CNN:0.987202167510986;iRNA_PseU:0 4200 chr19 38899412 38899412 1 + G A SKCM 38899412 - 38899392 38899432 41 ATTTGGGCGGCCCCCCCGGTCTGGAACGTTGCCCATAAGCA ATTTGGGCGGCCCCCCCGGTTTGGAACGTTGCCCATAAGCA Direct Gain 0 0.954669091404317 0 0.520425200462341 prediction 0.909338182808634 Functional Gain - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38899412 chr19:38899412 nonsynonymous SNV 0.983 3 21 hPsi_associated_SNPs_105240 0 0 0 0 0 Cytosol 0 0.438718598480424 0.040850400924682 0 hPsi_site_4200 iPseU_CNN:0.040850400924682;iRNA_PseU:0 4201 chr11 66024815 66024815 1 + G A rs150341182 66024815 - 66024795 66024835 41 TGGTGCCCTGGGTTCATTGACTTAATGCTCACGAAGACCCG TGGTGCCCTGGGTTCATTGATTTAATGCTCACGAAGACCCG Direct Gain 0 0.954667513370748 0 0.999979257583618 prediction 0.909335026741495 Functional Gain - KLC2 ENSG00000174996 UTR5 Human protein_coding chr11:66024815 chr11:66024815 . . 0 21 hPsi_associated_SNPs_105241 0 0 0 0 0 Ribosome 0 0.438720938490651 0.999958515167236 0 hPsi_site_4201 iPseU_CNN:0.999958515167236;iRNA_PseU:0 4202 chr15 91455347 91455347 1 + C T UCEC 91455347 + 91455327 91455367 41 CTGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTGTGCG CTGGGCCTGGATGGGCACCGTACGCTGCCCTCCTCTGTGCG Direct Gain 0 0.95466616308952 0 0.999985873699188 prediction 0.909332326179041 Functional Gain - MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91455347 chr15:91455347 synonymous SNV . 0 21 hPsi_associated_SNPs_105242 0 0 1 0 0 Endoplasmic reticulum 0 0.438689439014081 0.999971747398376 0 hPsi_site_4202 iPseU_CNN:0.999971747398376;iRNA_PseU:0 4203 chr15 81212460 81212460 1 + C T LUSC 81212460 + 81212440 81212480 41 GGACGTTGTGGGCTATAACTCTTTGGGCCACTGCTTCTTCA GGACGTTGTGGGCTATAACTTTTTGGGCCACTGCTTCTTCA Direct Gain 0 0.954661624587621 0 0.905748546123505 prediction 0.909323249175241 Functional Gain - CEMIP ENSG00000103888 CDS Human protein_coding chr15:81212460 chr15:81212460 nonsynonymous SNV 0.951 2 21 hPsi_associated_SNPs_105243 0 0 0 0 1 Nucleus 0 0.438718540372973 0.81149709224701 0 hPsi_site_4203 iPseU_CNN:0.81149709224701;iRNA_PseU:0 4204 chr1 35847334 35847334 1 + C T LUSC 35847334 + 35847314 35847354 41 GTCTAAGAAGTTTTGTAGTTCATCGTGTATCACGGCATACA GTCTAAGAAGTTTTGTAGTTTATCGTGTATCACGGCATACA Direct Gain 0 0.954657090756439 0 0.479667633771896 prediction 0.909314181512877 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35847334 chr1:35847334 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_105244 0 0 1 0 1 Cytosol 0 0.438719027848005 0 0 hPsi_site_4204 iPseU_CNN:0;iRNA_PseU:0 4205 chr19 52197545 52197545 1 + C T rs139192287 52197545 + 52197525 52197565 41 GGATAGCGACTGGTCGGGGGCAGAGACTCAGGGAGGATAGA GGATAGCGACTGGTCGGGGGTAGAGACTCAGGGAGGATAGA Direct Gain 0 0.954655580315407 0 0.998675942420959 prediction 0.909311160630814 Functional Gain - SPACA6 ENSG00000182310;ENSG00000273318 ncRNA_exonic Human other chr19:52197545 chr19:52197545 . . 0 21 hPsi_associated_SNPs_105245 0 0 1 2 0 chromatin 0 0.438719485754852 0.997351884841918 0 hPsi_site_4205 iPseU_CNN:0.997351884841918;iRNA_PseU:0 4206 chr1 41006266 41006266 1 + G T UCEC 41006266 + 41006246 41006286 41 GTGCTGTTACAGGAATCAGTGACATTCCAGGATGTGGCTGT GTGCTGTTACAGGAATCAGTTACATTCCAGGATGTGGCTGT Direct Gain 0 0.95465268678178 0 0.999974608421326 prediction 0.90930537356356 Functional Gain - ZNF684 ENSG00000117010 CDS Human protein_coding chr1:41006266 chr1:41006266 synonymous SNV . 0 21 hPsi_associated_SNPs_105246 0 0 1 0 1 nucleoplasm 0 0.438786107122599 0.999949216842652 0 hPsi_site_4206 iPseU_CNN:0.999949216842652;iRNA_PseU:0 4207 chr4 75971407 75971407 1 + G A UCEC 75971407 - 75971387 75971427 41 GTTTCCCCAGGACCCGTAGTCATGGTCGTCCAAAAGTCTTC GTTTCCCCAGGACCCGTAGTTATGGTCGTCCAAAAGTCTTC Direct Gain 0 0.954652164648375 0 0.996363461017609 prediction 0.909304329296751 Functional Gain - PARM1 ENSG00000169116 CDS Human protein_coding chr4:75971407 chr4:75971407 nonsynonymous SNV 0.959 4 21 hPsi_associated_SNPs_105247 0 0 0 0 0 exosome 0 0.438718593098965 0.992726922035218 0 hPsi_site_4207 iPseU_CNN:0.992726922035218;iRNA_PseU:0 4208 chr19 21676173 21676173 1 + C A rs8101089 21676173 - 21676153 21676193 41 AACAGTAATGTCACATTGGTGTTGAGCCCCACAATATGTCC AACAGTAATGTCACATTGGTTTTGAGCCCCACAATATGTCC Direct Gain 0 0.954634740715313 0 0.273348391056061 prediction 0.909269481430627 Functional Gain - LINC00664 ENSG00000268658 ncRNA_exonic Human lincRNA chr19:21676173 chr19:21676173 . . 0 21 hPsi_associated_SNPs_105248 0 0 0 0 0 unknown 0 0.438925630328355 0 0 hPsi_site_4208 iPseU_CNN:0;iRNA_PseU:0 4209 chr2 219000010 219000010 1 + C T LUAD 219000010 + 218999990 219000030 41 ACCCAGAAGCGCTACTTGGTCAAATTCATATGTCTCAGCAT ACCCAGAAGCGCTACTTGGTTAAATTCATATGTCTCAGCAT Direct Gain 0 0.954628822162956 0 1 prediction 0.909257644325913 Functional Gain - CXCR2 ENSG00000180871 CDS Human protein_coding chr2:219000010 chr2:219000010 synonymous SNV . 0 21 hPsi_associated_SNPs_105249 0 0 0 0 0 exosome 0 0.438718600797487 1 0 hPsi_site_4209 iPseU_CNN:1;iRNA_PseU:0 4210 chr1 186908349 186908349 1 + C A LUAD 186908349 - 186908329 186908369 41 AACTTACATTATGAATTAGTGTTTCTCCTATTAACATCCCA AACTTACATTATGAATTAGTTTTTCTCCTATTAACATCCCA Direct Gain 0 0.954626781168511 0 0.909177601337433 prediction 0.909253562337023 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186908349 chr1:186908349 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105250 0 0 0 0 0 Nucleus 0 0.438793537429045 0.818355202674866 0 hPsi_site_4210 iPseU_CNN:0.818355202674866;iRNA_PseU:0 4211 chr10 50165278 50165278 1 + G T UCEC 50165278 + 50165258 50165298 41 GTCAGGGAGCTGACCCCAGAGTTCTTCTACCTGCCTGAGTT GTCAGGGAGCTGACCCCAGATTTCTTCTACCTGCCTGAGTT Direct Gain 0 0.954621037615976 0 0.386008650064468 prediction 0.909242075231952 Functional Gain - WDFY4 ENSG00000128815 CDS Human protein_coding chr10:50165278 chr10:50165278 nonsynonymous SNV 0.961 5 21 hPsi_associated_SNPs_105251 0 0 0 0 1 exosome 0 0.438718427898256 0 0 hPsi_site_4211 iPseU_CNN:0;iRNA_PseU:0 4212 chr10 75550789 75550789 1 + C T UCEC 75550789 + 75550769 75550809 41 GCCAGCCGCTGCTGAATGGGCATGTCTGCTGCGCCCTCTGA GCCAGCCGCTGCTGAATGGGTATGTCTGCTGCGCCCTCTGA Direct Gain 0 0.954617421473549 0 0.999395132064819 prediction 0.909234842947099 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75550789 chr10:75550789 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105252 0 0 1 0 1 Cytosol 0 0.438906425090396 0.998790264129638 0 hPsi_site_4212 iPseU_CNN:0.998790264129638;iRNA_PseU:0 4213 chr12 8612237 8612237 1 + G A SKCM 8612237 - 8612217 8612257 41 TGAATGATATGAGTGTAGTTCAGACAGCCTTTTGCCAGTTT TGAATGATATGAGTGTAGTTTAGACAGCCTTTTGCCAGTTT Direct Gain 0 0.954610827246784 0 0.750712871551514 prediction 0.909221654493568 Functional Gain - CLEC6A ENSG00000205846 CDS Human protein_coding chr12:8612237 chr12:8612237 nonsynonymous SNV 0.253 0 21 hPsi_associated_SNPs_105253 0 0 0 0 0 exosome 0 0.438917027759251 0.501425743103028 0 hPsi_site_4213 iPseU_CNN:0.501425743103028;iRNA_PseU:0 4214 chr17 3143979 3143979 1 + G T UCEC 3143979 + 3143959 3143999 41 AAGTTGGGGGAATGGATGGAGATAACCAGAGTGAGAACTCA AAGTTGGGGGAATGGATGGATATAACCAGAGTGAGAACTCA Direct Gain 0 0.954607869415383 0 0.989012956619263 prediction 0.909215738830765 Functional Gain - OR1D4 ENSG00000255095 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:3143979 chr17:3143979 . . 0 21 hPsi_associated_SNPs_105254 0 0 0 0 0 unknown 0 0.438717743066344 0.978025913238526 0 hPsi_site_4214 iPseU_CNN:0.978025913238526;iRNA_PseU:0 4215 chr1 248224371 248224371 1 + C T LUSC 248224371 + 248224351 248224391 41 TTGCTATTTGCTTTCCTCTTCACTATCCCATCCGCATGAGC TTGCTATTTGCTTTCCTCTTTACTATCCCATCCGCATGAGC Direct Gain 0 0.954606682469561 0 0.370963096618652 prediction 0.909213364939122 Functional Gain - OR2L3 ENSG00000198128 CDS Human protein_coding chr1:248224371 chr1:248224371 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105255 0 0 0 0 0 unknown 0 0.438718593318593 0 0 hPsi_site_4215 iPseU_CNN:0;iRNA_PseU:0 4216 chr1 155103945 155103945 1 + G A LUSC 155103945 - 155103925 155103965 41 CTGGCACAGCTGGTACTCCTCATGCTCCACCAGGTACAGTA CTGGCACAGCTGGTACTCCTTATGCTCCACCAGGTACAGTA Direct Gain 0 0.954606032962504 0 0.999459862709045 prediction 0.909212065925008 Functional Gain - EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155103945 chr1:155103945 nonsynonymous SNV 0.926 3 21 hPsi_associated_SNPs_105256 0 0 0 0 0 Endoplasmic reticulum 0 0.438636529978837 0.99891972541809 0 hPsi_site_4216 iPseU_CNN:0.99891972541809;iRNA_PseU:0 4217 chr2 75159842 75159842 1 + C T rs186544654 75159842 + 75159822 75159862 41 GCAGCATGTGTTTCCATAGGCATCTTCTCTCAGTACCCCAG GCAGCATGTGTTTCCATAGGTATCTTCTCTCAGTACCCCAG Direct Gain 0 0.954600882930581 0 0.975436449050903 prediction 0.909201765861163 Functional Gain - LINC01291 ENSG00000204792 ncRNA_exonic Human lincRNA chr2:75159842 chr2:75159842 . . 0 21 hPsi_associated_SNPs_105257 0 0 0 0 1 unknown 0 0.438718593067484 0.950872898101806 0 hPsi_site_4217 iPseU_CNN:0.950872898101806;iRNA_PseU:0 4218 chr9 21409494 21409494 1 + G A SKCM 21409494 - 21409474 21409514 41 GTCAAGTTCGATGTAGAATTCATCTAGAAGGGTCTCATCCA GTCAAGTTCGATGTAGAATTTATCTAGAAGGGTCTCATCCA Direct Gain 0 0.954595147310531 0 0.999992787837982 prediction 0.909190294621062 Functional Gain - IFNA8 ENSG00000120242 CDS Human protein_coding chr9:21409494 chr9:21409494 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105258 0 0 0 0 0 unknown 0 0.43871859759785 0.999985575675964 0 hPsi_site_4218 iPseU_CNN:0.999985575675964;iRNA_PseU:0 4219 chr15 69003926 69003926 1 + G T BLCA 69003926 + 69003906 69003946 41 GTGAGCCGGTGAAGATGATTGACTGCCACACGGATGTGATC GTGAGCCGGTGAAGATGATTTACTGCCACACGGATGTGATC Direct Gain 0 0.954588216964877 0 0.533101141452789 prediction 0.909176433929754 Functional Gain - CORO2B ENSG00000103647 CDS Human protein_coding chr15:69003926 chr15:69003926 nonsynonymous SNV 0.988 2 21 hPsi_associated_SNPs_105259 0 0 1 0 1 exosome 0 0.438744798357255 0.0662022829055779 0 hPsi_site_4219 iPseU_CNN:0.0662022829055779;iRNA_PseU:0 4220 chr6 28121398 28121398 1 + C T UCEC 28121398 + 28121378 28121418 41 GAAAGCTTTCAGTCATAGCTCACACCTCATTGGACATCAGA GAAAGCTTTCAGTCATAGCTTACACCTCATTGGACATCAGA Direct Gain 0 0.954588133730147 0 0.872351169586182 prediction 0.909176267460293 Functional Gain - ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28121398 chr6:28121398 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105260 0 0 1 0 0 chromatin 0 0.438740573321438 0.744702339172364 0 hPsi_site_4220 iPseU_CNN:0.744702339172364;iRNA_PseU:0 4221 chr7 36462328 36462328 1 + G T UCEC 36462328 + 36462308 36462348 41 ATAAGGCTAGTCCCCAAAGTGAATTTATGCCATCCAAAGGA ATAAGGCTAGTCCCCAAAGTTAATTTATGCCATCCAAAGGA Direct Gain 0 0.954584113887008 0 0.914879441261292 prediction 0.909168227774015 Functional Gain - ANLN ENSG00000011426 CDS Human protein_coding chr7:36462328 chr7:36462328 stopgain 0.933 0 21 hPsi_associated_SNPs_105261 0 0 1 0 2 Nucleus 0 0.438711243996434 0.829758882522584 0 hPsi_site_4221 iPseU_CNN:0.829758882522584;iRNA_PseU:0 4222 chr1 11589947 11589947 1 + C T UCEC 11589947 + 11589927 11589967 41 GTGGATACCGGGGCCATGGTCTTTGTGGTCTTCGGCATTAT GTGGATACCGGGGCCATGGTTTTTGTGGTCTTCGGCATTAT Direct Gain 0 0.954574627060086 0 0.302420765161514 prediction 0.909149254120171 Functional Gain - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11589947 chr1:11589947 synonymous SNV . 0 21 hPsi_associated_SNPs_105262 0 0 0 0 1 exosome 0 0.43871917427666 0 0 hPsi_site_4222 iPseU_CNN:0;iRNA_PseU:0 4223 chr11 130339294 130339294 1 + G A SKCM 130339294 - 130339274 130339314 41 AGATTGCAGGATCGGTATTTCACCCTCACTCCCTCGCAGTA AGATTGCAGGATCGGTATTTTACCCTCACTCCCTCGCAGTA Direct Gain 0 0.954572158446828 0 0.999891638755798 prediction 0.909144316893657 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130339294 chr11:130339294 synonymous SNV . 0 21 hPsi_associated_SNPs_105263 0 0 0 0 0 exosome 0 0.43858378925143 0.999783277511596 0 hPsi_site_4223 iPseU_CNN:0.999783277511596;iRNA_PseU:0 4224 chr5 140581345 140581345 1 + C A UCEC 140581345 - 140581325 140581365 41 AGCGGCAGGTAGGGCTGGGAGAAGCCGTCCACCAGGAGCAC AGCGGCAGGTAGGGCTGGGATAAGCCGTCCACCAGGAGCAC Direct Gain 0 0.954571422253188 0 0.98442268371582 prediction 0.909142844506376 Functional Gain - PCDHB11 ENSG00000197479 CDS Human protein_coding chr5:140581345 chr5:140581345 nonsynonymous SNV 0.007 1 21 hPsi_associated_SNPs_105264 0 0 0 0 0 Nucleus 0 0.438697064171699 0.96884536743164 0 hPsi_site_4224 iPseU_CNN:0.96884536743164;iRNA_PseU:0 4225 chr12 2717815 2717815 1 + C T SKCM 2717815 + 2717795 2717835 41 AACATCTTCGTGGGCTTCGTCATCGTCACCTTTCAGGAGCA AACATCTTCGTGGGCTTCGTTATCGTCACCTTTCAGGAGCA Direct Gain 0 0.954569515379418 0 0.999311089515686 prediction 0.909139030758836 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2717815 chr12:2717815 synonymous SNV . 0 21 hPsi_associated_SNPs_105265 0 0 0 0 1 Cytosol 0 0.438720999495531 0.998622179031372 0 hPsi_site_4225 iPseU_CNN:0.998622179031372;iRNA_PseU:0 4226 chr19 36207502 36207502 1 + C A OV 36207502 - 36207482 36207522 41 CTGCATGGAGGCCAGGCTGGGACAGCCGGCCCCGCACAGGG CTGCATGGAGGCCAGGCTGGTACAGCCGGCCCCGCACAGGG Direct Gain 0 0.954568693583059 0 0.994936466217041 prediction 0.909137387166119 Functional Gain - ZBTB32 ENSG00000011590 CDS Human protein_coding chr19:36207502 chr19:36207502 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_105266 0 0 0 0 0 nucleus 0 0.438718593017656 0.989872932434082 0 hPsi_site_4226 iPseU_CNN:0.989872932434082;iRNA_PseU:0 4227 chr15 90799505 90799505 1 + G T UCEC 90799505 + 90799485 90799525 41 ATCAAGCCAGGAGAGCATATGATCTGCCAGCAATACATCTC ATCAAGCCAGGAGAGCATATTATCTGCCAGCAATACATCTC Direct Gain 0 0.954568126466704 0 0.998756587505341 prediction 0.909136252933407 Functional Gain - TTLL13P ENSG00000213471 CDS Human protein_coding chr15:90799505 chr15:90799505 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105267 0 0 0 0 1 unknown 0 0.439348445054507 0.997513175010682 0 hPsi_site_4227 iPseU_CNN:0.997513175010682;iRNA_PseU:0 4228 chr20 3850970 3850970 1 + G A rs144666706 3850970 - 3850950 3850990 41 AGAAAGAAGGTGGAGAGGGGCTAATATGCAGATACCATTGC AGAAAGAAGGTGGAGAGGGGTTAATATGCAGATACCATTGC Direct Gain 0 0.954566036353976 0 0.835519433021545 prediction 0.909132072707952 Functional Gain - MAVS ENSG00000088888;ENSG00000229539 intergenic Human other chr20:3850970 chr20:3850970 . . 0 21 hPsi_associated_SNPs_105268 0 0 0 0 0 Nucleus 0 0.438718593788606 0.67103886604309 0 hPsi_site_4228 iPseU_CNN:0.67103886604309;iRNA_PseU:0 4229 chr3 88189388 88189388 1 + G T UCEC 88189388 + 88189368 88189408 41 AATGCCATGAGCTTTTTGAAGATCTTCCTCTGCTGTATGAA AATGCCATGAGCTTTTTGAATATCTTCCTCTGCTGTATGAA Direct Gain 0 0.954563043588043 0 0.999251961708069 prediction 0.909126087176086 Functional Gain - ZNF654 ENSG00000175105 CDS Human protein_coding chr3:88189388 chr3:88189388 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105269 0 0 1 0 0 chromatin 0 0.43872556970329 0.998503923416138 0 hPsi_site_4229 iPseU_CNN:0.998503923416138;iRNA_PseU:0 4230 chr14 103187355 103187355 1 + T A rs201688800 103187355 - 103187335 103187375 41 AGAGCACTGTTTGTCTGTTTAATATTCTGGATCTAGGAAGG AGAGCACTGTTTGTCTGTTTTATATTCTGGATCTAGGAAGG Direct Gain 0 0.954560059445227 0 0.997058749198914 prediction 0.909120118890455 Functional Gain - RCOR1 ENSG00000089902 CDS Human protein_coding chr14:103187355 chr14:103187355 synonymous SNV . 0 21 hPsi_associated_SNPs_105270 0 0 0 0 0 Cytosol 0 0.438718592719087 0.994117498397828 0 hPsi_site_4230 iPseU_CNN:0.994117498397828;iRNA_PseU:0 4231 chr2 190728779 190728779 1 + G A rs61736573 190728779 - 190728759 190728799 41 ATTGTGGATCAAGCAAGGTTCATCCTTCTCTTCTAAGTCAA ATTGTGGATCAAGCAAGGTTTATCCTTCTCTTCTAAGTCAA Direct Gain 0 0.954555571094581 0 0.999853491783142 prediction 0.909111142189163 Functional Gain - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728779 chr2:190728779 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_105271 0 0 0 0 0 Nucleus 0 0.438624566594408 0.999706983566284 0 hPsi_site_4231 iPseU_CNN:0.999706983566284;iRNA_PseU:0 4232 chr1 92446495 92446495 1 + G A BLCA 92446495 - 92446475 92446515 41 CATAGGTTTAGCATTATCTTCATCTTCAGATTTTAGACCAA CATAGGTTTAGCATTATCTTTATCTTCAGATTTTAGACCAA Direct Gain 0 0.954553720036109 0 0.99943220615387 prediction 0.909107440072219 Functional Gain - BRDT ENSG00000137948 CDS Human protein_coding chr1:92446495 chr1:92446495 nonsynonymous SNV 0.984 4 21 hPsi_associated_SNPs_105272 0 0 0 0 0 exosome 0 0.438718592984535 0.99886441230774 0 hPsi_site_4232 iPseU_CNN:0.99886441230774;iRNA_PseU:0 4233 chr11 10514928 10514928 1 + G A SKCM 10514928 - 10514908 10514948 41 CGCAGCAGATGCTTTTGGTTCATGCAGGCGGCCGCATGGAT CGCAGCAGATGCTTTTGGTTTATGCAGGCGGCCGCATGGAT Direct Gain 0 0.954544908200445 0 0.0486895740032196 prediction 0.90908981640089 Functional Gain - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10514928 chr11:10514928 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105273 0 0 0 0 0 Cytosol 0 0.438718602744207 0 0 hPsi_site_4233 iPseU_CNN:0;iRNA_PseU:0 4234 chr12 52446304 52446304 1 + C T rs61915172 52446304 + 52446284 52446324 41 GGTGCAGCCTGAGGCTTGTTCAGCAGAACAGGTGCAAGCCA GGTGCAGCCTGAGGCTTGTTTAGCAGAACAGGTGCAAGCCA Direct Gain 0 0.954541016134906 0 0.753963112831116 prediction 0.909082032269812 Functional Gain - NR4A1 ENSG00000123358 UTR5 Human protein_coding chr12:52446304 chr12:52446304 . . 0 21 hPsi_associated_SNPs_105274 0 0 0 0 1 Endoplasmic reticulum 0 0.438692863222928 0.507926225662232 0 hPsi_site_4234 iPseU_CNN:0.507926225662232;iRNA_PseU:0 4235 chr14 51710599 51710599 1 + C T LUSC 51710599 + 51710579 51710619 41 CCCCGTGGTGCCCTGCTTGTCAAAATCTTCAACCGGAATGG CCCCGTGGTGCCCTGCTTGTTAAAATCTTCAACCGGAATGG Direct Gain 0 0.95454065304473 0 0.136088997125626 prediction 0.90908130608946 Functional Gain - TMX1 ENSG00000139921 CDS Human protein_coding chr14:51710599 chr14:51710599 stopgain 1.000 1 21 hPsi_associated_SNPs_105275 0 0 1 0 3 Ribosome 0 0.438718592995102 0 0 hPsi_site_4235 iPseU_CNN:0;iRNA_PseU:0 4236 chr17 57990111 57990111 1 + C A OV 57990111 - 57990091 57990131 41 AGCTCAAAACATTCTGGTCTGATTTTTTCTGGCCCTCTGTT AGCTCAAAACATTCTGGTCTTATTTTTTCTGGCCCTCTGTT Direct Gain 0 0.954540348629134 0 0.990615904331207 prediction 0.909080697258267 Functional Gain - RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:57990111 chr17:57990111 synonymous SNV . 0 21 hPsi_associated_SNPs_105276 0 0 0 0 0 Ribosome 0 0.43859342896758 0.981231808662414 0 hPsi_site_4236 iPseU_CNN:0.981231808662414;iRNA_PseU:0 4237 chr3 169801897 169801897 1 + G A UCEC 169801897 - 169801877 169801917 41 TTTGACAGGTGTTTTTTCTTCTCATTCCTAGTGTAAGGATA TTTGACAGGTGTTTTTTCTTTTCATTCCTAGTGTAAGGATA Direct Gain 0 0.954530669406667 0 0.416364550590515 prediction 0.909061338813334 Functional Gain - GPR160 ENSG00000173890 CDS Human protein_coding chr3:169801897 chr3:169801897 nonsynonymous SNV 0.386 0 21 hPsi_associated_SNPs_105277 0 0 1 0 0 Cytosol 0 0.438718751953851 0 0 hPsi_site_4237 iPseU_CNN:0;iRNA_PseU:0 4238 chr16 30972767 30972767 1 + C T BLCA 30972767 + 30972747 30972787 41 GGCCTGGCCCGTGTGCTCTTCACCAGCACTCGGGGCGCCAA GGCCTGGCCCGTGTGCTCTTTACCAGCACTCGGGGCGCCAA Direct Gain 0 0.954528474627772 0 0.67190408706665 prediction 0.909056949255545 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30972767 chr16:30972767 synonymous SNV . 0 21 hPsi_associated_SNPs_105278 0 0 1 0 1 Cytosol 0 0.438757716235328 0.3438081741333 0 hPsi_site_4238 iPseU_CNN:0.3438081741333;iRNA_PseU:0 4239 chr22 20291721 20291721 1 + G A rs553092943 20291721 - 20291701 20291741 41 GAGGGGATGGCTCACTACTGCACCACCCCAGTCACCTCCCC GAGGGGATGGCTCACTACTGTACCACCCCAGTCACCTCCCC Direct Gain 0 0.954528021696078 0 0.999980628490448 prediction 0.909056043392155 Functional Gain - RTN4R;DGCR6L ENSG00000161132 ncRNA_intronic Human unprocessed_pseudogene chr22:20291721 chr22:20291721 . . 0 21 hPsi_associated_SNPs_105279 0 0 0 0 0 unknown 0 0.438720428960664 0.999961256980896 0 hPsi_site_4239 iPseU_CNN:0.999961256980896;iRNA_PseU:0 4240 chr2 85595841 85595841 1 + G A LUSC 85595841 - 85595821 85595861 41 GGTGTCCACAGCTTCCCATTCTTCTTGGGCTCTGACCACCT GGTGTCCACAGCTTCCCATTTTTCTTGGGCTCTGACCACCT Direct Gain 0 0.954526414647427 0 0.661758422851562 prediction 0.909052829294855 Functional Gain - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85595841 chr2:85595841 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105280 0 0 0 0 0 Cytosol 0 0.438863536723464 0.323516845703124 0 hPsi_site_4240 iPseU_CNN:0.323516845703124;iRNA_PseU:0 4241 chr1 16057693 16057693 1 + G T rs116565708 16057693 + 16057673 16057713 41 TTGTGCCCCTGCAGCAACGGGATCCTCTACCAGTACCCGGA TTGTGCCCCTGCAGCAACGGTATCCTCTACCAGTACCCGGA Direct Gain 0 0.954519595290126 0 0.999965190887451 prediction 0.909039190580252 Functional Gain - PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16057693 chr1:16057693 synonymous SNV . 0 21 hPsi_associated_SNPs_105281 0 0 0 0 2 chromatin 0 0.438715645458561 0.999930381774902 0 hPsi_site_4241 iPseU_CNN:0.999930381774902;iRNA_PseU:0 4242 chr19 45183597 45183597 1 + C T rs149827243 45183597 + 45183577 45183617 41 AGCCAGAATTGGGCCCTGCTCATGATGCTGGTAAGGCGGGA AGCCAGAATTGGGCCCTGCTTATGATGCTGGTAAGGCGGGA Direct Gain 0 0.954516920014338 0 0.965542078018188 prediction 0.909033840028676 Functional Gain - CEACAM19 ENSG00000186567 CDS Human protein_coding chr19:45183597 chr19:45183597 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105282 0 0 0 0 2 Cytosol 0 0.438718592995109 0.931084156036376 0 hPsi_site_4242 iPseU_CNN:0.931084156036376;iRNA_PseU:0 4243 chr14 35465981 35465981 1 + T A BLCA 35465981 - 35465961 35466001 41 TTACATACCTCTTCATTGATAATGGTGGCATTGCTCAACGA TTACATACCTCTTCATTGATTATGGTGGCATTGCTCAACGA Direct Gain 0 0.954516150915781 0 0.995388150215149 prediction 0.909032301831561 Functional Gain - SRP54 ENSG00000100883 CDS Human protein_coding chr14:35465981 chr14:35465981 stopgain 1.000 0 21 hPsi_associated_SNPs_105283 0 0 0 0 0 Ribosome 0 0.438699778011697 0.990776300430298 0 hPsi_site_4243 iPseU_CNN:0.990776300430298;iRNA_PseU:0 4244 chr14 71445286 71445286 1 + G T UCEC 71445286 + 71445266 71445306 41 GGACGGGCTTCCCAGTTAGAGACAGTCACTCGATCTAGGAA GGACGGGCTTCCCAGTTAGATACAGTCACTCGATCTAGGAA Direct Gain 0 0.954513919349304 0 0.999839544296265 prediction 0.909027838698608 Functional Gain - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71445286 chr14:71445286 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_105284 0 0 1 0 1 Endoplasmic reticulum 0 0.438727709979968 0.99967908859253 0 hPsi_site_4244 iPseU_CNN:0.99967908859253;iRNA_PseU:0 4245 chr16 332725 332725 1 + C A UCEC 332725 - 332705 332745 41 GGTGAAGAGGGACACCACCAGATAGGGGCCCCGCACCAGCG GGTGAAGAGGGACACCACCATATAGGGGCCCCGCACCAGCG Direct Gain 0 0.95450668465569 0 0.998853087425232 prediction 0.90901336931138 Functional Gain - ARHGDIG ENSG00000242173 CDS Human protein_coding chr16:332725 chr16:332725 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105285 0 0 0 0 0 exosome 0 0.438718592921363 0.997706174850464 0 hPsi_site_4245 iPseU_CNN:0.997706174850464;iRNA_PseU:0 4246 chr3 12447443 12447443 1 + G T UCEC 12447443 + 12447423 12447463 41 TGTTGGCGGAGATCTCCAGTGATATCGACCAGCTGAATCCA TGTTGGCGGAGATCTCCAGTTATATCGACCAGCTGAATCCA Direct Gain 0 0.954505426217046 0 0.999998092651367 prediction 0.909010852434092 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12447443 chr3:12447443 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105286 0 0 0 0 1 Cytosol 0 0.437619910730152 0.999996185302734 0 hPsi_site_4246 iPseU_CNN:0.999996185302734;iRNA_PseU:0 4247 chr1 204082136 204082136 1 + G A UCEC 204082136 - 204082116 204082156 41 TGGGGGGCCTCGTGGCAAGGCTCTTTCTTCTCCTCTGACTT TGGGGGGCCTCGTGGCAAGGTTCTTTCTTCTCCTCTGACTT Direct Gain 0 0.954499396351369 0 0.999998331069946 prediction 0.908998792702739 Functional Gain - SOX13 ENSG00000143842 CDS Human protein_coding chr1:204082136 chr1:204082136 synonymous SNV . 0 21 hPsi_associated_SNPs_105287 0 0 0 0 0 nucleus 0 0.438718619063138 0.999996662139892 0 hPsi_site_4247 iPseU_CNN:0.999996662139892;iRNA_PseU:0 4248 chr1 33237798 33237798 1 + C A UCEC 33237798 - 33237778 33237818 41 TGGGGTGGCCGCTGCTCTGAGATGCTCCGGAGTTCTGCCAC TGGGGTGGCCGCTGCTCTGATATGCTCCGGAGTTCTGCCAC Direct Gain 0 0.954492540462826 0 0.980057954788208 prediction 0.908985080925653 Functional Gain - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237798 chr1:33237798 synonymous SNV . 0 21 hPsi_associated_SNPs_105288 0 0 0 0 0 Ribosome 0 0.438650107757456 0.960115909576416 0 hPsi_site_4248 iPseU_CNN:0.960115909576416;iRNA_PseU:0 4249 chr13 103271162 103271162 1 + G A OV 103271162 - 103271142 103271182 41 ATCATGCCATACCAAGCAGTCATATACAGGGCCAGGATCGC ATCATGCCATACCAAGCAGTTATATACAGGGCCAGGATCGC Direct Gain 0 0.954488984725819 0 0.999980688095093 prediction 0.908977969451638 Functional Gain - TPP2 ENSG00000134900 CDS Human protein_coding chr13:103271162 chr13:103271162 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105289 0 0 0 0 0 Nucleus 0 0.438711002552792 0.999961376190186 0 hPsi_site_4249 iPseU_CNN:0.999961376190186;iRNA_PseU:0 4250 chr13 42701667 42701667 1 + C T HNSC 42701667 + 42701647 42701687 41 AGGTGGAAAAAGCGATACTTCAAACTTCGAGGCCGCACCCT AGGTGGAAAAAGCGATACTTTAAACTTCGAGGCCGCACCCT Direct Gain 0 0.954480933219662 0 0.996888399124146 prediction 0.908961866439325 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42701667 chr13:42701667 synonymous SNV . 0 21 hPsi_associated_SNPs_105290 0 0 1 0 2 chromatin 0 0.438718594214217 0.993776798248292 0 hPsi_site_4250 iPseU_CNN:0.993776798248292;iRNA_PseU:0 4251 chr20 13251325 13251325 1 + C T rs76665689 13251325 + 13251305 13251345 41 ATTTCCCCAGATCCTTTCTCCTTGATCTACCAAACTTTCCA ATTTCCCCAGATCCTTTCTCTTTGATCTACCAAACTTTCCA Direct Gain 0 0.954480927095486 0 0.00196138024330139 prediction 0.908961854190971 Functional Gain - ISM1 ENSG00000101230 CDS Human protein_coding chr20:13251325 chr20:13251325 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105291 0 0 0 0 1 exosome 0 0.438718592995102 0 0 hPsi_site_4251 iPseU_CNN:0;iRNA_PseU:0 4252 chr4 27019403 27019403 1 + G A UCEC 27019403 - 27019383 27019423 41 TGAGGCTGAGGCGAGGACGGCACAATGCTGCGGCGTGAACG TGAGGCTGAGGCGAGGACGGTACAATGCTGCGGCGTGAACG Direct Gain 0 0.954479742694369 0 0.999999821186066 prediction 0.908959485388737 Functional Gain - STIM2 ENSG00000109689 CDS Human protein_coding chr4:27019403 chr4:27019403 synonymous SNV . 0 21 hPsi_associated_SNPs_105292 0 0 0 0 0 Nucleus 0 0.438719016284415 0.999999642372132 0 hPsi_site_4252 iPseU_CNN:0.999999642372132;iRNA_PseU:0 4253 chr19 32902349 32902349 1 + G A LUSC 32902349 - 32902329 32902369 41 CAAAACTGTGTTGCCTTGGTCATTCATCCACATGGCTTACT CAAAACTGTGTTGCCTTGGTTATTCATCCACATGGCTTACT Direct Gain 0 0.954474798093028 0 0.234671175479889 prediction 0.908949596186057 Functional Gain - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32902349 chr19:32902349 synonymous SNV . 0 21 hPsi_associated_SNPs_105293 0 0 0 0 0 cytosol 0 0.438718223636227 0 0 hPsi_site_4253 iPseU_CNN:0;iRNA_PseU:0 4254 chr14 101518827 101518827 1 + G A rs143972054 101518827 - 101518807 101518847 41 GATGTCCCTGTATGATTCGTCATAAATTAAGCGAACACAGC GATGTCCCTGTATGATTCGTTATAAATTAAGCGAACACAGC Direct Gain 0 0.954473690587456 0 0.00477778911590576 prediction 0.908947381174913 Functional Gain - MIR487A ENSG00000207558 ncRNA_exonic Human other chr14:101518827 chr14:101518827 . . 0 21 hPsi_associated_SNPs_105294 0 0 0 0 0 unknown 0 0.438939405823522 0 0 hPsi_site_4254 iPseU_CNN:0;iRNA_PseU:0 4255 chr6 145119080 145119080 1 + C A STAD 145119080 - 145119060 145119100 41 ACAGATGTTGCATTTGGCCTGATGTTTTGCAGTCTCCGCTG ACAGATGTTGCATTTGGCCTTATGTTTTGCAGTCTCCGCTG Direct Gain 0 0.954451785075338 0 0.984756112098694 prediction 0.908903570150676 Functional Gain - UTRN ENSG00000152818 CDS Human protein_coding chr6:145119080 chr6:145119080 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105295 0 0 0 0 0 Nucleus 0 0.437714832257741 0.969512224197388 0 hPsi_site_4255 iPseU_CNN:0.969512224197388;iRNA_PseU:0 4256 chr19 45495519 45495519 1 + C T BLCA 45495519 + 45495499 45495539 41 ACCATGACGCCCCAGCTCTTCATCAACTACAAGCTCAAGTC ACCATGACGCCCCAGCTCTTTATCAACTACAAGCTCAAGTC Direct Gain 0 0.954447932534795 0 0.99833083152771 prediction 0.90889586506959 Functional Gain - CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45495519 chr19:45495519 synonymous SNV . 0 21 hPsi_associated_SNPs_105296 0 0 1 0 0 Cytosol 0 0.437198005564832 0.99666166305542 0 hPsi_site_4256 iPseU_CNN:0.99666166305542;iRNA_PseU:0 4257 chr9 126139177 126139177 1 + G A UCEC 126139177 - 126139157 126139197 41 GAGGAGGAGGAGGAGGCAGGCACAGGCTGCAGGTACGGCCA GAGGAGGAGGAGGAGGCAGGTACAGGCTGCAGGTACGGCCA Direct Gain 0 0.954444656973995 0 0.99996554851532 prediction 0.90888931394799 Functional Gain - CRB2 ENSG00000148204 CDS Human protein_coding chr9:126139177 chr9:126139177 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105297 0 0 0 0 0 exosome 0 0.438718592994939 0.99993109703064 0 hPsi_site_4257 iPseU_CNN:0.99993109703064;iRNA_PseU:0 4258 chr2 234915549 234915549 1 + A T SARC 234915549 + 234915529 234915569 41 TGGGAGGGTGTCATGAAGGAAAACTACCTTGTCAAGATCAA TGGGAGGGTGTCATGAAGGATAACTACCTTGTCAAGATCAA Direct Gain 0 0.954440966081985 0 0.131910979747772 prediction 0.90888193216397 Functional Gain - TRPM8 ENSG00000144481 CDS Human protein_coding chr2:234915549 chr2:234915549 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105298 0 0 0 2 2 exosome 0 0.438718682291154 0 0 hPsi_site_4258 iPseU_CNN:0;iRNA_PseU:0 4259 chr1 100133276 100133276 1 + C A COAD 100133276 - 100133256 100133296 41 GATCTGGTGCTGGTCTTGTTGATTTTGCTTCTTCATCTCTT GATCTGGTGCTGGTCTTGTTTATTTTGCTTCTTCATCTCTT Direct Gain 0 0.954429734932357 0 0.989474058151245 prediction 0.908859469864714 Functional Gain - PALMD ENSG00000099260 CDS Human protein_coding chr1:100133276 chr1:100133276 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_105299 0 0 0 0 0 Cytosol 0 0.442052809593512 0.97894811630249 0 hPsi_site_4259 iPseU_CNN:0.97894811630249;iRNA_PseU:0 4260 chr5 55034828 55034828 1 + C T BLCA 55034828 + 55034808 55034848 41 GGGAAGCAGAAATCAACCCTCATATGTCTTCCTATGTTCCC GGGAAGCAGAAATCAACCCTTATATGTCTTCCTATGTTCCC Direct Gain 0 0.954426543966165 0 0.956856966018677 prediction 0.90885308793233 Functional Gain - DDX4 ENSG00000152670 CDS Human protein_coding chr5:55034828 chr5:55034828 nonsynonymous SNV 0.825 3 21 hPsi_associated_SNPs_105300 0 0 0 0 2 unknown 0 0.438865435691226 0.913713932037354 0 hPsi_site_4260 iPseU_CNN:0.913713932037354;iRNA_PseU:0 4261 chr9 127572296 127572296 1 + G T UCEC 127572296 + 127572276 127572316 41 GGCGCGGACACTCGGACATTGACTTTGCCGTGGACGAGAGC GGCGCGGACACTCGGACATTTACTTTGCCGTGGACGAGAGC Direct Gain 0 0.954418268471037 0 0.997842490673065 prediction 0.908836536942074 Functional Gain - OLFML2A ENSG00000185585 CDS Human protein_coding chr9:127572296 chr9:127572296 nonsynonymous SNV 0.888 5 21 hPsi_associated_SNPs_105301 0 0 1 0 0 Nucleus 0 0.43868127522316 0.99568498134613 0 hPsi_site_4261 iPseU_CNN:0.99568498134613;iRNA_PseU:0 4262 chr1 153654997 153654997 1 + G T LUSC 153654997 + 153654977 153655017 41 TGACAGGATACCTGAAAATTGATAGCAGTGGCGATCGGGAA TGACAGGATACCTGAAAATTTATAGCAGTGGCGATCGGGAA Direct Gain 0 0.954417807097292 0 0.969243109226227 prediction 0.908835614194584 Functional Gain - NPR1 ENSG00000169418 CDS Human protein_coding chr1:153654997 chr1:153654997 nonsynonymous SNV 0.990 5 21 hPsi_associated_SNPs_105302 0 0 0 0 1 Cytosol 0 0.438717638393199 0.938486218452454 0 hPsi_site_4262 iPseU_CNN:0.938486218452454;iRNA_PseU:0 4263 chr19 55224785 55224785 1 + G A rs2296370 55224785 - 55224765 55224805 41 AACCTCCTAGGACTATCAGACTCATTGCCAAGGCTCTGGCA AACCTCCTAGGACTATCAGATTCATTGCCAAGGCTCTGGCA Direct Gain 0 0.954415465651313 0 0.759543001651764 prediction 0.908830931302626 Functional Gain - LILRP2 ENSG00000170858 ncRNA_exonic Human transcribed_processed_pseudogene chr19:55224785 chr19:55224785 . . 0 21 hPsi_associated_SNPs_105303 0 0 0 0 0 unknown 0 0.438718571418753 0.519086003303528 0 hPsi_site_4263 iPseU_CNN:0.519086003303528;iRNA_PseU:0 4264 chr19 41828573 41828573 1 + G T LUSC 41828573 + 41828553 41828593 41 AGGAGGAGAGGTACTTTGATGAGGAAGAACCTGAGGATGCG AGGAGGAGAGGTACTTTGATTAGGAAGAACCTGAGGATGCG Direct Gain 0 0.954410805751958 0 0.999832034111023 prediction 0.908821611503916 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41828573 chr19:41828573 stopgain 0.998 0 21 hPsi_associated_SNPs_105304 0 0 1 0 1 chromatin 0 0.438718583608778 0.999664068222046 0 hPsi_site_4264 iPseU_CNN:0.999664068222046;iRNA_PseU:0 4265 chr19 44635578 44635578 1 + C T SKCM 44635578 + 44635558 44635598 41 AATGTGGGAAGGCCTTCATTCATGATTCCCAGCTTCAGGAA AATGTGGGAAGGCCTTCATTTATGATTCCCAGCTTCAGGAA Direct Gain 0 0.954407382831569 0 1 prediction 0.908814765663137 Functional Gain - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44635578 chr19:44635578 nonsynonymous SNV 0.524 2 21 hPsi_associated_SNPs_105305 0 0 0 0 0 exosome 0 0.438718592995102 1 0 hPsi_site_4265 iPseU_CNN:1;iRNA_PseU:0 4266 chr12 56629458 56629458 1 + C T COAD 56629458 + 56629438 56629478 41 TGCTGGAGAACATGCTGGGGCTTTTGCGGCACCGAGGGCTC TGCTGGAGAACATGCTGGGGTTTTTGCGGCACCGAGGGCTC Direct Gain 0 0.954404613316496 0 0.996572971343994 prediction 0.908809226632993 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56629458 chr12:56629458 nonsynonymous SNV 0.890 1 21 hPsi_associated_SNPs_105306 0 0 1 0 1 cytosol 0 0.438718592961678 0.993145942687988 0 hPsi_site_4266 iPseU_CNN:0.993145942687988;iRNA_PseU:0 4267 chr1 151505004 151505004 1 + G A BLCA 151505004 - 151504984 151505024 41 TCCAGAGGTCTTCTCAGCCTCACTGGCCCAATCCTTGGCCT TCCAGAGGTCTTCTCAGCCTTACTGGCCCAATCCTTGGCCT Direct Gain 0 0.954397133934358 0 0.568171143531799 prediction 0.908794267868717 Functional Gain - CGN ENSG00000143375 CDS Human protein_coding chr1:151505004 chr1:151505004 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105307 0 0 0 0 0 exosome 0 0.438721388768406 0.136342287063598 0 hPsi_site_4267 iPseU_CNN:0.136342287063598;iRNA_PseU:0 4268 chr2 159672313 159672313 1 + C T SKCM 159672313 + 159672293 159672333 41 TGAAAAGGATCTACATTATTCAGCAGCCTCGAAAATGTTAA TGAAAAGGATCTACATTATTTAGCAGCCTCGAAAATGTTAA Direct Gain 0 0.95439653127351 0 0.870022535324097 prediction 0.908793062547019 Functional Gain - DAPL1 ENSG00000163331 CDS Human protein_coding chr2:159672313 chr2:159672313 stopgain 1.000 1 21 hPsi_associated_SNPs_105308 0 0 0 0 1 exosome 0 0.438627648225266 0.740045070648194 0 hPsi_site_4268 iPseU_CNN:0.740045070648194;iRNA_PseU:0 4269 chr5 140530858 140530858 1 + C A LUAD 140530858 - 140530838 140530878 41 ATGGTGAGTTCAGGGGCATTGTCATTCACGTCCAGGACCCT ATGGTGAGTTCAGGGGCATTTTCATTCACGTCCAGGACCCT Direct Gain 0 0.954390892156576 0 0.999955773353577 prediction 0.908781784313152 Functional Gain - PCDHB6 ENSG00000113211 CDS Human protein_coding chr5:140530858 chr5:140530858 nonsynonymous SNV 0.886 3 21 hPsi_associated_SNPs_105309 0 0 0 0 0 exosome 0 0.43851446974694 0.999911546707154 0 hPsi_site_4269 iPseU_CNN:0.999911546707154;iRNA_PseU:0 4270 chr17 80543811 80543811 1 + C T COAD 80543811 + 80543791 80543831 41 TCCAGTCAGCCAGTCTTAATCACCGTCCAGCGGCAGCTACC TCCAGTCAGCCAGTCTTAATTACCGTCCAGCGGCAGCTACC Direct Gain 0 0.954390804821833 0 0.00210320949554443 prediction 0.908781609643667 Functional Gain - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80543811 chr17:80543811 synonymous SNV . 0 21 hPsi_associated_SNPs_105310 0 0 1 0 0 Cytosol 0 0.43871897485697 0 0 hPsi_site_4270 iPseU_CNN:0;iRNA_PseU:0 4271 chr20 60881738 60881738 1 + G A CESC 60881738 - 60881718 60881758 41 TGCATGAGCTGGCTGTGGCTCATGTTTCCCAGCAGGCTCTG TGCATGAGCTGGCTGTGGCTTATGTTTCCCAGCAGGCTCTG Direct Gain 0 0.954389701192914 0 0.999937415122986 prediction 0.908779402385828 Functional Gain - ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881738 chr20:60881738 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105311 0 0 0 0 0 Ribosome 0 0.438717724644313 0.999874830245972 0 hPsi_site_4271 iPseU_CNN:0.999874830245972;iRNA_PseU:0 4272 chr4 20543138 20543138 1 + G A LAML 20543138 - 20543118 20543158 41 CCGTGACAATTCTCTTCTTTCTCAGCCACTCTCCCAACCAA CCGTGACAATTCTCTTCTTTTTCAGCCACTCTCCCAACCAA Direct Gain 0 0.954389386553408 0 0.999429523944855 prediction 0.908778773106816 Functional Gain - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20543138 chr4:20543138 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105312 0 0 0 0 0 Ribosome 0 0.438718592995099 0.99885904788971 0 hPsi_site_4272 iPseU_CNN:0.99885904788971;iRNA_PseU:0 4273 chr18 77156091 77156091 1 + G T rs146292734 77156091 + 77156071 77156111 41 GCGCGCACACGCCCCTCGATGACTTTCCTCCGGGGCGCGCG GCGCGCACACGCCCCTCGATTACTTTCCTCCGGGGCGCGCG Direct Gain 0 0.95437975829741 0 0.997666597366333 prediction 0.908759516594819 Functional Gain - NFATC1 ENSG00000131196 UTR5 Human protein_coding chr18:77156091 chr18:77156091 . . 0 21 hPsi_associated_SNPs_105313 0 0 0 0 0 Cytosol 0 0.438719840987106 0.995333194732666 0 hPsi_site_4273 iPseU_CNN:0.995333194732666;iRNA_PseU:0 4274 chr8 59059539 59059539 1 + C T BLCA 59059539 + 59059519 59059559 41 GTGGAACCAGCTTGTGGAGTCAGCCGAAGACCCTCCCTCCA GTGGAACCAGCTTGTGGAGTTAGCCGAAGACCCTCCCTCCA Direct Gain 0 0.954370193134861 0 0.999974131584167 prediction 0.908740386269722 Functional Gain - FAM110B ENSG00000169122 CDS Human protein_coding chr8:59059539 chr8:59059539 synonymous SNV . 0 21 hPsi_associated_SNPs_105314 0 0 0 0 0 Cytosol 0 0.438734930368369 0.999948263168334 0 hPsi_site_4274 iPseU_CNN:0.999948263168334;iRNA_PseU:0 4275 chr5 140431107 140431107 1 + C T BLCA 140431107 + 140431087 140431127 41 ACAGGCAAGTGGGATCTCTTCTCATTTTTCTGTGCATATCT ACAGGCAAGTGGGATCTCTTTTCATTTTTCTGTGCATATCT Direct Gain 0 0.954353753842147 0 0.150132834911346 prediction 0.908707507684294 Functional Gain - PCDHB1 ENSG00000171815 CDS Human protein_coding chr5:140431107 chr5:140431107 nonsynonymous SNV 0.541 0 21 hPsi_associated_SNPs_105315 0 0 0 0 0 unknown 0 0.438718587833725 0 0 hPsi_site_4275 iPseU_CNN:0;iRNA_PseU:0 4276 chr17 37881425 37881425 1 + G A CESC 37881425 - 37881405 37881445 41 TGCATGGTACTCTGTCTCGTCAATGTCCAGCAGCCGAGCCA TGCATGGTACTCTGTCTCGTTAATGTCCAGCAGCCGAGCCA Direct Gain 0 0.954350153195955 0 0.351528733968735 prediction 0.90870030639191 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37881425 chr17:37881425 nonsynonymous SNV 0.851 3 21 hPsi_associated_SNPs_105316 0 0 0 0 0 Cytosol 0 0.436837278991062 0 0 hPsi_site_4276 iPseU_CNN:0;iRNA_PseU:0 4277 chr5 72469250 72469250 1 + C A LUSC 72469250 - 72469230 72469270 41 TGGGAGACACCTTGGTATTTGATCCAGCCCATGACAGTGAA TGGGAGACACCTTGGTATTTTATCCAGCCCATGACAGTGAA Direct Gain 0 0.954338378379148 0 0.830441355705261 prediction 0.908676756758297 Functional Gain - TMEM174 ENSG00000164325 CDS Human protein_coding chr5:72469250 chr5:72469250 synonymous SNV . 0 21 hPsi_associated_SNPs_105317 0 0 0 0 0 unknown 0 0.438718642343653 0.660882711410522 0 hPsi_site_4277 iPseU_CNN:0.660882711410522;iRNA_PseU:0 4278 chr17 13980173 13980173 1 + G T UCEC 13980173 + 13980153 13980193 41 AGCAGAAATATATGAGATGAGACCTCTCTCACCGCCCAGCC AGCAGAAATATATGAGATGATACCTCTCTCACCGCCCAGCC Direct Gain 0 0.954334730445082 0 0.999774098396301 prediction 0.908669460890165 Functional Gain - COX10 ENSG00000006695 CDS Human protein_coding chr17:13980173 chr17:13980173 nonsynonymous SNV 0.038 0 21 hPsi_associated_SNPs_105318 0 0 1 0 0 Cytosol 0 0.43871859264526 0.999548196792602 0 hPsi_site_4278 iPseU_CNN:0.999548196792602;iRNA_PseU:0 4279 chr7 20438615 20438615 1 + G A BLCA 20438615 - 20438595 20438635 41 AAATGCACACCCACATACTTCATCATTGCTCGTCACGTTTC AAATGCACACCCACATACTTTATCATTGCTCGTCACGTTTC Direct Gain 0 0.954332451537634 0 0.00393205881118774 prediction 0.908664903075268 Functional Gain - ITGB8 ENSG00000105855 CDS Human protein_coding chr7:20438615 chr7:20438615 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_105319 0 0 0 0 0 Nucleus 0 0.438693661784408 0 0 hPsi_site_4279 iPseU_CNN:0;iRNA_PseU:0 4280 chr19 42839282 42839282 1 + G A OV 42839282 - 42839262 42839302 41 AAGGCAGGGTCCCTGGCACTCACGTTGTGCCACCACCCAGC AAGGCAGGGTCCCTGGCACTTACGTTGTGCCACCACCCAGC Direct Gain 0 0.954331312184783 0 0.970519483089447 prediction 0.908662624369565 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839282 chr19:42839282 synonymous SNV . 0 21 hPsi_associated_SNPs_105320 0 0 0 0 0 Endoplasmic reticulum 0 0.438718594002821 0.941038966178894 0 hPsi_site_4280 iPseU_CNN:0.941038966178894;iRNA_PseU:0 4281 chr19 58370669 58370669 1 + C A LUSC 58370669 - 58370649 58370689 41 TTTCCCGCACTCCTCACAGGGATAAGCTGTCTGTCCAGTGT TTTCCCGCACTCCTCACAGGTATAAGCTGTCTGTCCAGTGT Direct Gain 0 0.95432323255819 0 0.999937534332275 prediction 0.908646465116381 Functional Gain - ZNF587 ENSG00000198466 CDS Human protein_coding chr19:58370669 chr19:58370669 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105321 0 0 0 0 0 Nucleus 0 0.43945210523113 0.99987506866455 0 hPsi_site_4281 iPseU_CNN:0.99987506866455;iRNA_PseU:0 4282 chrX 107320392 107320392 1 + C A UCEC 107320392 - 107320372 107320412 41 GGCTCATAGTCTGGTTCTTGGATGGTATCAGGGCCAGTCTC GGCTCATAGTCTGGTTCTTGTATGGTATCAGGGCCAGTCTC Direct Gain 0 0.954314508732115 0 0.997456550598145 prediction 0.908629017464231 Functional Gain - VSIG1 ENSG00000101842 CDS Human protein_coding chrX:107320392 chrX:107320392 synonymous SNV . 0 21 hPsi_associated_SNPs_105322 0 0 0 0 0 Nucleus 0 0.438718567227392 0.99491310119629 0 hPsi_site_4282 iPseU_CNN:0.99491310119629;iRNA_PseU:0 4283 chr7 2753725 2753725 1 + C T rs11976039 2753725 + 2753705 2753745 41 GGAATTGACCCTTTTATTGTCACACGTACCCCCTCAGCCTG GGAATTGACCCTTTTATTGTTACACGTACCCCCTCAGCCTG Direct Gain 0 0.954304871637096 0 0.996634840965271 prediction 0.908609743274191 Functional Gain - AMZ1 ENSG00000174945 UTR3 Human protein_coding chr7:2753725 chr7:2753725 . . 0 21 hPsi_associated_SNPs_105323 0 0 0 0 0 nucleus 0 0.438718589119352 0.993269681930542 0 hPsi_site_4283 iPseU_CNN:0.993269681930542;iRNA_PseU:0 4284 chr9 90462253 90462253 1 + G A rs7018666 90462253 - 90462233 90462273 41 TCCTCAGTCGAGTCCTTCCTCATCACCATCCATCAGCTCAC TCCTCAGTCGAGTCCTTCCTTATCACCATCCATCAGCTCAC Direct Gain 0 0.954291586719425 0 0.713215410709381 prediction 0.90858317343885 Functional Gain - CTSLP8 ENSG00000233884;ENSG00000234575 downstream Human other chr9:90462253 chr9:90462253 . . 0 21 hPsi_associated_SNPs_105324 0 0 0 0 0 unknown 0 0.438720793735736 0.426430821418762 0 hPsi_site_4284 iPseU_CNN:0.426430821418762;iRNA_PseU:0 4285 chr4 141300765 141300765 1 + G A STAD 141300765 - 141300745 141300785 41 CCAACACTTGATTAATAAGTCTTGTTTTTTCCTCCAGTTCC CCAACACTTGATTAATAAGTTTTGTTTTTTCCTCCAGTTCC Direct Gain 0 0.954290942709801 0 0.777629494667053 prediction 0.908581885419601 Functional Gain - SCOC ENSG00000153130 CDS Human protein_coding chr4:141300765 chr4:141300765 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105325 0 0 0 0 0 Ribosome 0 0.438718593051064 0.555258989334106 0 hPsi_site_4285 iPseU_CNN:0.555258989334106;iRNA_PseU:0 4286 chr8 75756273 75756273 1 + G T COAD 75756273 + 75756253 75756293 41 GGGCGGCTACTTGCATTTGGGACCATGGACCTTCTTACTTA GGGCGGCTACTTGCATTTGGTACCATGGACCTTCTTACTTA Direct Gain 0 0.954263941482664 0 0.89796370267868 prediction 0.908527882965327 Functional Gain - PI15 ENSG00000137558 CDS Human protein_coding chr8:75756273 chr8:75756273 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105326 0 0 0 0 2 exosome 0 0.438718610359423 0.79592740535736 0 hPsi_site_4286 iPseU_CNN:0.79592740535736;iRNA_PseU:0 4287 chr3 99895244 99895244 1 + G A COAD 99895244 - 99895224 99895264 41 GGTACCTCGGGAATGTCCATCATTCTCCTCAACTTCTGATC GGTACCTCGGGAATGTCCATTATTCTCCTCAACTTCTGATC Direct Gain 0 0.954255608835544 0 0.997417807579041 prediction 0.908511217671089 Functional Gain - CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99895244 chr3:99895244 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105327 0 0 0 0 0 Ribosome 0 0.438822642833649 0.994835615158082 0 hPsi_site_4287 iPseU_CNN:0.994835615158082;iRNA_PseU:0 4288 chr7 5105227 5105227 1 + C A COAD 5105227 - 5105207 5105247 41 AATTGAGATCTGACTTCAGAGATTTTCCACATCAAGTACGT AATTGAGATCTGACTTCAGATATTTTCCACATCAAGTACGT Direct Gain 0 0.954247772496661 0 0.857342958450317 prediction 0.908495544993323 Functional Gain - RBAK ENSG00000146587 CDS Human protein_coding chr7:5105227 chr7:5105227 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_105328 0 0 0 0 0 Cytosol 0 0.381277834169028 0.714685916900634 0 hPsi_site_4288 iPseU_CNN:0.714685916900634;iRNA_PseU:0 4289 chr12 54396548 54396548 1 + G A rs144848510 54396548 - 54396528 54396568 41 CTATCTTGCTCTTTCCTTTTCTTTTTCGTCTCTCCCCCGCC CTATCTTGCTCTTTCCTTTTTTTTTTCGTCTCTCCCCCGCC Direct Gain 0 0.954242143944914 0 0.381101071834564 prediction 0.908484287889828 Functional Gain - HOXC9 ENSG00000180806 UTR3 Human protein_coding chr12:54396548 chr12:54396548 . . 0 21 hPsi_associated_SNPs_105329 0 0 0 0 0 chromatin 0 0.4387185929951 0 0 hPsi_site_4289 iPseU_CNN:0;iRNA_PseU:0 4290 chr16 27752135 27752135 1 + C T rs12447120 27752135 + 27752115 27752155 41 GTCCACAGTGATGACTCAGACATCTTTAACCAGCCCCCCAA GTCCACAGTGATGACTCAGATATCTTTAACCAGCCCCCCAA Direct Gain 0 0.954238972748745 0 0.993463039398193 prediction 0.908477945497489 Functional Gain - KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27752135 chr16:27752135 synonymous SNV . 0 21 hPsi_associated_SNPs_105330 0 0 0 0 0 Nucleus 0 0.438720916949965 0.986926078796386 0 hPsi_site_4290 iPseU_CNN:0.986926078796386;iRNA_PseU:0 4291 chr2 75113779 75113779 1 + C T SKCM 75113779 + 75113759 75113799 41 TGTGGCTGTGGATGAGCTTTCACTCAACCCCGGCAAGCAGA TGTGGCTGTGGATGAGCTTTTACTCAACCCCGGCAAGCAGA Direct Gain 0 0.954232610483794 0 0.986098408699036 prediction 0.908465220967588 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75113779 chr2:75113779 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_105331 0 0 1 0 1 Nucleus 0 0.438738016318904 0.972196817398072 0 hPsi_site_4291 iPseU_CNN:0.972196817398072;iRNA_PseU:0 4292 chr3 115395178 115395178 1 + G A LUSC 115395178 - 115395158 115395198 41 TGCCTGCTCTGTGGCAGCATCACCCTCCCCCTTCTTCTCCT TGCCTGCTCTGTGGCAGCATTACCCTCCCCCTTCTTCTCCT Direct Gain 0 0.954231234148753 0 0.417547345161438 prediction 0.908462468297506 Functional Gain - GAP43 ENSG00000172020 CDS Human protein_coding chr3:115395178 chr3:115395178 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_105332 0 0 0 0 0 nucleus 0 0.438718494916026 0 0 hPsi_site_4292 iPseU_CNN:0;iRNA_PseU:0 4293 chr2 207175538 207175538 1 + G A SKCM 207175538 - 207175518 207175558 41 AGAGCCTTGTCCATCAGCATCATTATCTCCTGCACTGGAGT AGAGCCTTGTCCATCAGCATTATTATCTCCTGCACTGGAGT Direct Gain 0 0.954221800802928 0 2.89082527160645e-05 prediction 0.908443601605856 Functional Gain - ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175538 chr2:207175538 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105333 0 0 0 0 0 Nucleus 0 0.438732781025768 0 0 hPsi_site_4293 iPseU_CNN:0;iRNA_PseU:0 4294 chr3 49753087 49753087 1 + C T BLCA 49753087 + 49753067 49753107 41 GATGTGGCACCCAGCTTCCTCAACAGCGTCCTCAATCAGCT GATGTGGCACCCAGCTTCCTTAACAGCGTCCTCAATCAGCT Direct Gain 0 0.954201280085606 0 0.925329327583313 prediction 0.908402560171212 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49753087 chr3:49753087 synonymous SNV . 0 21 hPsi_associated_SNPs_105334 0 0 0 0 2 Nucleus 0 0.442407544221501 0.850658655166626 0 hPsi_site_4294 iPseU_CNN:0.850658655166626;iRNA_PseU:0 4295 chrX 47068887 47068887 1 + C T UCEC 47068887 + 47068867 47068907 41 AGGTGGGGGAATGGGGAAGGCTAGAGGGCTTCCCCACTTCC AGGTGGGGGAATGGGGAAGGTTAGAGGGCTTCCCCACTTCC Direct Gain 0 0.954198750391822 0 0.0043921172618866 prediction 0.908397500783645 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47068887 chrX:47068887 synonymous SNV . 0 21 hPsi_associated_SNPs_105335 0 0 1 0 0 Nucleus 0 0.438718592995102 0 0 hPsi_site_4295 iPseU_CNN:0;iRNA_PseU:0 4296 chr5 140346534 140346534 1 + G A LUSC 140346534 - 140346514 140346554 41 TCAAGCCCCAGCGCGCGAGCCACGTTGCCCACGAGCGCGCC TCAAGCCCCAGCGCGCGAGCTACGTTGCCCACGAGCGCGCC Direct Gain 0 0.954192716504063 0 0.998695492744446 prediction 0.908385433008127 Functional Gain - PCDHAC2 ENSG00000243232 CDS Human protein_coding chr5:140346534 chr5:140346534 synonymous SNV . 0 21 hPsi_associated_SNPs_105336 0 0 0 0 0 exosome 0 0.438715599125624 0.997390985488892 0 hPsi_site_4296 iPseU_CNN:0.997390985488892;iRNA_PseU:0 4297 chr8 22035197 22035197 1 + G T UCEC 22035197 + 22035177 22035217 41 CTGGACAGGACTCTTCCTGAGACCCTCCCCATTCCCCAGGC CTGGACAGGACTCTTCCTGATACCCTCCCCATTCCCCAGGC Direct Gain 0 0.954190436661312 0 0.967937767505646 prediction 0.908380873322624 Functional Gain - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22035197 chr8:22035197 nonsynonymous SNV 0.195 2 21 hPsi_associated_SNPs_105337 0 0 0 0 1 Endoplasmic reticulum 0 0.438718587184789 0.935875535011292 0 hPsi_site_4297 iPseU_CNN:0.935875535011292;iRNA_PseU:0 4298 chr13 88327698 88327698 1 + C T COAD 88327698 + 88327678 88327718 41 AGGACCTTCACAGAAAAATGCATAGCTGGATGCTGCAGACT AGGACCTTCACAGAAAAATGTATAGCTGGATGCTGCAGACT Direct Gain 0 0.954189254672509 0 0.975741803646088 prediction 0.908378509345019 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327698 chr13:88327698 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105338 0 0 1 0 1 nucleus 0 0.438710630927772 0.951483607292176 0 hPsi_site_4298 iPseU_CNN:0.951483607292176;iRNA_PseU:0 4299 chr12 53700549 53700549 1 + C A STAD 53700549 - 53700529 53700569 41 AGAAGATGGCCACTGGAGGGGACAGCCCAGATTCCAGGTGG AGAAGATGGCCACTGGAGGGTACAGCCCAGATTCCAGGTGG Direct Gain 0 0.95418889793851 0 0.993432402610779 prediction 0.90837779587702 Functional Gain - C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700549 chr12:53700549 nonsynonymous SNV 0.049 1 21 hPsi_associated_SNPs_105339 0 0 0 0 0 cytosol 0 0.438718488771254 0.986864805221558 0 hPsi_site_4299 iPseU_CNN:0.986864805221558;iRNA_PseU:0 4300 chr1 19955120 19955120 1 + G A rs551345550 19955120 - 19955100 19955140 41 GCAGTGGCGCGATCTCAGCTCACCGCAACCTCTGCCTCCCG GCAGTGGCGCGATCTCAGCTTACCGCAACCTCTGCCTCCCG Direct Gain 0 0.954187757067588 0 0.999780297279358 prediction 0.908375514135177 Functional Gain - MINOS1 ENSG00000173436 UTR3 Human protein_coding chr1:19955120 chr1:19955120 . . 0 21 hPsi_associated_SNPs_105340 0 0 0 0 0 Nucleus 0 0.436398088344973 0.999560594558716 0 hPsi_site_4300 iPseU_CNN:0.999560594558716;iRNA_PseU:0 4301 chr15 75044554 75044554 1 + C A LUAD 75044554 - 75044534 75044574 41 GAAGGGCAAGAAGGAGGAGTGTCGGAAGGTCTCCAGGATGA GAAGGGCAAGAAGGAGGAGTTTCGGAAGGTCTCCAGGATGA Direct Gain 0 0.95418614194319 0 0.964341998100281 prediction 0.908372283886379 Functional Gain - CYP1A2 ENSG00000140505 CDS Human protein_coding chr15:75044554 chr15:75044554 nonsynonymous SNV 0.967 2 21 hPsi_associated_SNPs_105341 0 0 0 0 0 Nucleus 0 0.438718592991645 0.928683996200562 0 hPsi_site_4301 iPseU_CNN:0.928683996200562;iRNA_PseU:0 4302 chr19 55815927 55815927 1 + C T UCEC 55815927 + 55815907 55815947 41 TGTCCTCTGCAGAGTCCGGTCTTTTCCTTTTCACCGGAGCC TGTCCTCTGCAGAGTCCGGTTTTTTCCTTTTCACCGGAGCC Direct Gain 0 0.954180306486625 0 0.823584079742432 prediction 0.908360612973251 Functional Gain - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55815927 chr19:55815927 synonymous SNV . 0 21 hPsi_associated_SNPs_105342 0 0 1 0 0 chromatin 0 0.438718589712966 0.647168159484864 0 hPsi_site_4302 iPseU_CNN:0.647168159484864;iRNA_PseU:0 4303 chr15 91843959 91843959 1 + G T rs73520617 91843959 + 91843939 91843979 41 TTAATCCTTTGGCTAGATGGGATACCTCTTCTACCTTTTCA TTAATCCTTTGGCTAGATGGTATACCTCTTCTACCTTTTCA Direct Gain 0 0.95416859032372 0 0.900276601314545 prediction 0.908337180647441 Functional Gain - SV2B ENSG00000185518 UTR3 Human protein_coding chr15:91843959 chr15:91843959 . . 0 21 hPsi_associated_SNPs_105343 0 0 0 0 0 Cytosol 0 0.438718593881361 0.80055320262909 0 hPsi_site_4303 iPseU_CNN:0.80055320262909;iRNA_PseU:0 4304 chr9 125562680 125562680 1 + C T rs144743444 125562680 + 125562660 125562700 41 TTGGCCCATGACCACTCCATCTCGCTGGCTGGCTGCCTGAC TTGGCCCATGACCACTCCATTTCGCTGGCTGGCTGCCTGAC Direct Gain 0 0.954164604860566 0 0.0888433754444122 prediction 0.908329209721133 Functional Gain - OR1K1 ENSG00000165204 CDS Human protein_coding chr9:125562680 chr9:125562680 synonymous SNV . 0 21 hPsi_associated_SNPs_105344 0 0 0 0 0 unknown 0 0.438718607286861 0 0 hPsi_site_4304 iPseU_CNN:0;iRNA_PseU:0 4305 chr12 101018061 101018061 1 + C T rs61748063 101018061 + 101018041 101018081 41 ATCTCACTTAGCTGCACATTCAAATTCATCCTCAAAATGTC ATCTCACTTAGCTGCACATTTAAATTCATCCTCAAAATGTC Direct Gain 0 0.954161909147513 0 0.999999165534973 prediction 0.908323818295026 Functional Gain - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101018061 chr12:101018061 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105345 0 0 1 0 0 Cytosol 0 0.436413262694999 0.999998331069946 0 hPsi_site_4305 iPseU_CNN:0.999998331069946;iRNA_PseU:0 4306 chr21 42767611 42767611 1 + G A SKCM 42767611 - 42767591 42767631 41 TGGCCCCGGCACTTCACAATCATGTAGCCCTTCTTGAGGGG TGGCCCCGGCACTTCACAATTATGTAGCCCTTCTTGAGGGG Direct Gain 0 0.954159145606213 0 0.990591526031494 prediction 0.908318291212426 Functional Gain - MX2 ENSG00000183486 CDS Human protein_coding chr21:42767611 chr21:42767611 nonsynonymous SNV 0.967 3 21 hPsi_associated_SNPs_105346 0 0 0 0 0 exosome 0 0.43872999211588 0.981183052062988 0 hPsi_site_4306 iPseU_CNN:0.981183052062988;iRNA_PseU:0 4307 chr21 45547881 45547881 1 + G A LUSC 45547881 - 45547861 45547901 41 GGTGTCCAGCTCAAACGGGTCAAAGAGCACGCGGGTGTCCA GGTGTCCAGCTCAAACGGGTTAAAGAGCACGCGGGTGTCCA Direct Gain 0 0.954158499921726 0 0.995008826255798 prediction 0.908316999843451 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45547881 chr21:45547881 nonsynonymous SNV 0.639 2 21 hPsi_associated_SNPs_105347 0 0 0 0 0 Nucleus 0 0.438719741372247 0.990017652511596 0 hPsi_site_4307 iPseU_CNN:0.990017652511596;iRNA_PseU:0 4308 chr3 32280527 32280527 1 + G T UCEC 32280527 + 32280507 32280547 41 ACCGCCAGCTCCTTCGCAGAGAACTTCTCCACCAGCAGCAG ACCGCCAGCTCCTTCGCAGATAACTTCTCCACCAGCAGCAG Direct Gain 0 0.954157955364276 0 0.993568420410156 prediction 0.908315910728551 Functional Gain - CMTM8 ENSG00000170293 CDS Human protein_coding chr3:32280527 chr3:32280527 nonsynonymous SNV 0.976 0 21 hPsi_associated_SNPs_105348 0 0 1 0 1 Nucleus 0 0.438718592410394 0.987136840820312 0 hPsi_site_4308 iPseU_CNN:0.987136840820312;iRNA_PseU:0 4309 chr16 23692284 23692284 1 + G A CESC 23692284 - 23692264 23692304 41 TTAGGAGTCCCACACAGGGTCTTCTTCCTCTCCCCGTCATA TTAGGAGTCCCACACAGGGTTTTCTTCCTCTCCCCGTCATA Direct Gain 0 0.954155468870423 0 0.339890211820602 prediction 0.908310937740847 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23692284 chr16:23692284 synonymous SNV . 0 21 hPsi_associated_SNPs_105349 0 0 0 0 0 Ribosome 0 0.438718618853762 0 0 hPsi_site_4309 iPseU_CNN:0;iRNA_PseU:0 4310 chr3 52543271 52543271 1 + G A UCEC 52543271 - 52543251 52543291 41 GCAGGCGATGCCCTTGTAGTCTGGGAAGCAGAGGCAGGCCC GCAGGCGATGCCCTTGTAGTTTGGGAAGCAGAGGCAGGCCC Direct Gain 0 0.95414608624926 0 0.000799894332885742 prediction 0.908292172498519 Functional Gain - STAB1 ENSG00000010327 CDS Human protein_coding chr3:52543271 chr3:52543271 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105350 0 0 0 0 0 cytosol 0 0.438718592525103 0 0 hPsi_site_4310 iPseU_CNN:0;iRNA_PseU:0 4311 chr5 140724693 140724693 1 + G T COAD 140724693 + 140724673 140724713 41 AAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTG AAGAGGGCACCGTTGGAAGATAAATTGCTCTTATCGACGTG Direct Gain 0 0.954142017390823 0 0.999996423721313 prediction 0.908284034781647 Functional Gain - PCDHGA3 ENSG00000254245 CDS Human protein_coding chr5:140724693 chr5:140724693 stopgain 0.991 0 21 hPsi_associated_SNPs_105351 0 0 0 0 0 exosome 0 0.43881296628808 0.999992847442626 0 hPsi_site_4311 iPseU_CNN:0.999992847442626;iRNA_PseU:0 4312 chr12 52159647 52159647 1 + G A CESC 52159647 - 52159627 52159667 41 CATATGCCAGCGAGGGAGTTCACAGTCCTGGTTGATCTTGC CATATGCCAGCGAGGGAGTTTACAGTCCTGGTTGATCTTGC Direct Gain 0 0.954134649988318 0 0.0689976811408997 prediction 0.908269299976636 Functional Gain - SCN8A ENSG00000196876 CDS Human protein_coding chr12:52159647 chr12:52159647 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_105352 0 0 0 0 0 nucleus 0 0.438718593143169 0 0 hPsi_site_4312 iPseU_CNN:0;iRNA_PseU:0 4313 chr9 100353611 100353611 1 + G A rs142059795 100353611 - 100353591 100353631 41 GCGTTTTTTTCCAACATGCTCACAATCTCCATTTCCACTTT GCGTTTTTTTCCAACATGCTTACAATCTCCATTTCCACTTT Direct Gain 0 0.954120413825788 0 0.950990319252014 prediction 0.908240827651576 Functional Gain - TMOD1 ENSG00000136842 CDS Human protein_coding chr9:100353611 chr9:100353611 synonymous SNV . 0 21 hPsi_associated_SNPs_105353 0 0 0 0 0 Ribosome 0 0.4386457850745 0.901980638504028 0 hPsi_site_4313 iPseU_CNN:0.901980638504028;iRNA_PseU:0 4314 chr5 118506884 118506884 1 + T A UCEC 118506884 - 118506864 118506904 41 GAAGTATGCAGTAACTAAGAAACATTCTCAAAAGTGACTGA GAAGTATGCAGTAACTAAGATACATTCTCAAAAGTGACTGA Direct Gain 0 0.954119367677948 0 0.999898552894592 prediction 0.908238735355896 Functional Gain - DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118506884 chr5:118506884 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105354 0 0 0 0 0 Cytosol 0 0.447379608579685 0.999797105789184 0 hPsi_site_4314 iPseU_CNN:0.999797105789184;iRNA_PseU:0 4315 chr5 60768594 60768594 1 + T A UCEC 60768594 - 60768574 60768614 41 GGTCACTGAGGTAATCTTGCAACGATCAAAGCTGATGGCCA GGTCACTGAGGTAATCTTGCTACGATCAAAGCTGATGGCCA Direct Gain 0 0.954116796823755 0 0.995001554489136 prediction 0.90823359364751 Functional Gain - ZSWIM6 ENSG00000130449 CDS Human protein_coding chr5:60768594 chr5:60768594 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105355 0 0 0 0 0 chromatin 0 0.438720068667633 0.990003108978272 0 hPsi_site_4315 iPseU_CNN:0.990003108978272;iRNA_PseU:0 4316 chr3 35681578 35681578 1 + C A rs569667339 35681578 - 35681558 35681598 41 CGCTGCCCCTGCTGCTGCTGGTCTCTGCTCCGGACGCGCTC CGCTGCCCCTGCTGCTGCTGTTCTCTGCTCCGGACGCGCTC Direct Gain 0 0.954116756084642 0 0.663302779197693 prediction 0.908233512169285 Functional Gain - ARPP21 ENSG00000172995 UTR5 Human protein_coding chr3:35681578 chr3:35681578 . . 0 21 hPsi_associated_SNPs_105356 0 0 0 0 0 Nucleus 0 0.438716253373957 0.326605558395386 0 hPsi_site_4316 iPseU_CNN:0.326605558395386;iRNA_PseU:0 4317 chr4 130023943 130023943 1 + G A HNSC 130023943 - 130023923 130023963 41 ACAGTACTTCCACTTACCTTCATAATCCCACAGTTCATTGA ACAGTACTTCCACTTACCTTTATAATCCCACAGTTCATTGA Direct Gain 0 0.954103823066989 0 0.954538464546204 prediction 0.908207646133978 Functional Gain - C4orf33 ENSG00000151470 CDS Human protein_coding chr4:130023943 chr4:130023943 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105357 0 0 0 0 0 nucleoplasm 0 0.438718515809013 0.909076929092408 0 hPsi_site_4317 iPseU_CNN:0.909076929092408;iRNA_PseU:0 4318 chrX 78011052 78011052 1 + G A COAD 78011052 - 78011032 78011072 41 TAGCAGGCTTGCGAAGAGTTCTCAGCACCACAGAAGAGCAA TAGCAGGCTTGCGAAGAGTTTTCAGCACCACAGAAGAGCAA Direct Gain 0 0.954102360664696 0 0.962068438529968 prediction 0.908204721329393 Functional Gain - LPAR4 ENSG00000147145 CDS Human protein_coding chrX:78011052 chrX:78011052 nonsynonymous SNV 0.982 0 21 hPsi_associated_SNPs_105358 0 0 0 0 0 exosome 0 0.438733294327114 0.924136877059936 0 hPsi_site_4318 iPseU_CNN:0.924136877059936;iRNA_PseU:0 4319 chr1 248084342 248084342 1 + C T SARC 248084342 + 248084322 248084362 41 GGAAAATGGGAGCTATACCTCTTATTTCATTCTCCTAGGAC GGAAAATGGGAGCTATACCTTTTATTTCATTCTCCTAGGAC Direct Gain 0 0.954097393567571 0 0.711863875389099 prediction 0.908194787135143 Functional Gain - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248084342 chr1:248084342 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_105359 0 0 0 0 0 exosome 0 0.438718478675217 0.423727750778198 0 hPsi_site_4319 iPseU_CNN:0.423727750778198;iRNA_PseU:0 4320 chr15 25415878 25415878 1 + G A ESCA 25415878 - 25415858 25415898 41 GGATAATATAAGGTTCTCATCATCAACACAACCCAGGGCAC GGATAATATAAGGTTCTCATTATCAACACAACCCAGGGCAC Direct Gain 0 0.954088910345025 0 0.796299338340759 prediction 0.90817782069005 Functional Gain - SNORD115-1 ENSG00000201831 ncRNA_exonic Human snoRNA chr15:25415878 chr15:25415878 . . 0 21 hPsi_associated_SNPs_105360 0 0 0 0 0 unknown 0 0.438655887338725 0.592598676681518 0 hPsi_site_4320 iPseU_CNN:0.592598676681518;iRNA_PseU:0 4321 chr9 95768376 95768376 1 + G A LUAD 95768376 - 95768356 95768396 41 GGCTCGGTCAAAGTTCTTGACATACTCGCCGTACATCTTCA GGCTCGGTCAAAGTTCTTGATATACTCGCCGTACATCTTCA Direct Gain 0 0.954083453948025 0 0.165055006742477 prediction 0.908166907896049 Functional Gain - FGD3 ENSG00000127084 CDS Human protein_coding chr9:95768376 chr9:95768376 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_105361 0 0 0 0 0 exosome 0 0.438718255083516 0 0 hPsi_site_4321 iPseU_CNN:0;iRNA_PseU:0 4322 chr19 1969891 1969891 1 + G A BLCA 1969891 - 1969871 1969911 41 CGGAAGTTGGGGCCCACCATCAGGACCCCCGAGCTGGTCCC CGGAAGTTGGGGCCCACCATTAGGACCCCCGAGCTGGTCCC Direct Gain 0 0.95408300117843 0 0.552886009216309 prediction 0.908166002356861 Functional Gain - CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1969891 chr19:1969891 synonymous SNV . 0 21 hPsi_associated_SNPs_105362 0 0 0 0 0 Ribosome 0 0.438718592995102 0.105772018432618 0 hPsi_site_4322 iPseU_CNN:0.105772018432618;iRNA_PseU:0 4323 chr1 1168120 1168120 1 + G A LUSC 1168120 - 1168100 1168140 41 GCGAAGGAGTCGTCGTCCGCCTTGAGCACGAACTCGAAGGC GCGAAGGAGTCGTCGTCCGCTTTGAGCACGAACTCGAAGGC Direct Gain 0 0.95407332657807 0 0.999998569488525 prediction 0.90814665315614 Functional Gain - B3GALT6 ENSG00000176022 CDS Human protein_coding chr1:1168120 chr1:1168120 synonymous SNV . 0 21 hPsi_associated_SNPs_105363 0 0 0 0 0 Ribosome 0 0.438465111364789 0.99999713897705 0 hPsi_site_4323 iPseU_CNN:0.99999713897705;iRNA_PseU:0 4324 chr12 57600296 57600296 1 + G A OV 57600296 - 57600276 57600316 41 CCGGGGAACAGGCTGCGGATCTCATTGTCATCAGCGATGTA CCGGGGAACAGGCTGCGGATTTCATTGTCATCAGCGATGTA Direct Gain 0 0.954071505401607 0 0.999996662139893 prediction 0.908143010803214 Functional Gain - LRP1 ENSG00000123384 CDS Human protein_coding chr12:57600296 chr12:57600296 synonymous SNV . 0 21 hPsi_associated_SNPs_105364 0 0 0 0 0 Exosome 0 0.438719257968893 0.999993324279786 0 hPsi_site_4324 iPseU_CNN:0.999993324279786;iRNA_PseU:0 4325 chr3 136664893 136664893 1 + G A STAD 136664893 - 136664873 136664913 41 CCATACCATTGATCTTCCTGCATTTCCACCACTCTGGGTCA CCATACCATTGATCTTCCTGTATTTCCACCACTCTGGGTCA Direct Gain 0 0.954070683590602 0 0.568686783313751 prediction 0.908141367181205 Functional Gain - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664893 chr3:136664893 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105365 0 0 0 0 0 Ribosome 0 0.438739657371221 0.137373566627502 0 hPsi_site_4325 iPseU_CNN:0.137373566627502;iRNA_PseU:0 4326 chr16 68732498 68732498 1 + G T rs114591853 68732498 + 68732478 68732518 41 TGGAGGAATGTGGGCAGTTTGACTTCAGCACTGAAAACCTC TGGAGGAATGTGGGCAGTTTTACTTCAGCACTGAAAACCTC Direct Gain 0 0.954068650410832 0 0.985979437828064 prediction 0.908137300821664 Functional Gain - CDH3 ENSG00000062038 UTR3 Human protein_coding chr16:68732498 chr16:68732498 . . 0 21 hPsi_associated_SNPs_105366 0 0 0 0 0 Endoplasmic reticulum 0 0.4387191513408 0.971958875656128 0 hPsi_site_4326 iPseU_CNN:0.971958875656128;iRNA_PseU:0 4327 chrX 128881675 128881675 1 + G A BLCA 128881675 - 128881655 128881695 41 ATTTGGAACCGGTGGCCTCTCTGATCCCCATACCAGGTCCA ATTTGGAACCGGTGGCCTCTTTGATCCCCATACCAGGTCCA Direct Gain 0 0.954064282979602 0 0.999716460704803 prediction 0.908128565959205 Functional Gain - XPNPEP2 ENSG00000122121 CDS Human protein_coding chrX:128881675 chrX:128881675 nonsynonymous SNV 0.940 1 21 hPsi_associated_SNPs_105367 0 0 0 0 0 exosome 0 0.438728870412053 0.999432921409606 0 hPsi_site_4327 iPseU_CNN:0.999432921409606;iRNA_PseU:0 4328 chr16 3077426 3077426 1 + G A BLCA 3077426 - 3077406 3077446 41 GAGGAGCCAGGCACCTGGGCCTTCAGCTCCCCGCTCAGCTG GAGGAGCCAGGCACCTGGGCTTTCAGCTCCCCGCTCAGCTG Direct Gain 0 0.954060092621174 0 0.999865889549255 prediction 0.908120185242349 Functional Gain - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3077426 chr16:3077426 synonymous SNV . 0 21 hPsi_associated_SNPs_105368 0 0 0 0 0 Ribosome 0 0.438716526744573 0.99973177909851 0 hPsi_site_4328 iPseU_CNN:0.99973177909851;iRNA_PseU:0 4329 chr3 14862939 14862939 1 + C A LUSC 14862939 - 14862919 14862959 41 GGTCTCCGGGGTGGAATCTGGATATTCTCATAGTCCGAGTT GGTCTCCGGGGTGGAATCTGTATATTCTCATAGTCCGAGTT Direct Gain 0 0.9540572256558 0 0.979506373405457 prediction 0.9081144513116 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14862939 chr3:14862939 synonymous SNV . 0 21 hPsi_associated_SNPs_105369 0 0 0 0 0 Cytosol 0 0.438730479215863 0.959012746810914 0 hPsi_site_4329 iPseU_CNN:0.959012746810914;iRNA_PseU:0 4330 chr13 113460556 113460556 1 + G T UCEC 113460556 + 113460536 113460576 41 GATACACCCACAAGTCCAGTGACAAGCGGACTTCCACTCTT GATACACCCACAAGTCCAGTTACAAGCGGACTTCCACTCTT Direct Gain 0 0.954055468664845 0 0.996266007423401 prediction 0.90811093732969 Functional Gain - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113460556 chr13:113460556 synonymous SNV . 0 21 hPsi_associated_SNPs_105370 0 0 1 0 2 Endoplasmic reticulum 0 0.438718659189974 0.992532014846802 0 hPsi_site_4330 iPseU_CNN:0.992532014846802;iRNA_PseU:0 4331 chr17 38325681 38325681 1 + C T STAD 38325681 + 38325661 38325701 41 ACTCCCCAGCCAGTCACCATCAAGCCCCCTCCACCTGAGGT ACTCCCCAGCCAGTCACCATTAAGCCCCCTCCACCTGAGGT Direct Gain 0 0.954048177622871 0 0.86467307806015 prediction 0.908096355245743 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38325681 chr17:38325681 synonymous SNV . 0 21 hPsi_associated_SNPs_105371 0 0 1 0 1 Ribosome 0 0.43872708986028 0.7293461561203 0 hPsi_site_4331 iPseU_CNN:0.7293461561203;iRNA_PseU:0 4332 chr17 41477310 41477310 1 + C T STAD 41477310 + 41477290 41477330 41 CTCGGGGGATCGCGTGGCATCACCTTCCAAGTGTGGGACGT CTCGGGGGATCGCGTGGCATTACCTTCCAAGTGTGGGACGT Direct Gain 0 0.954037095398527 0 0.90308678150177 prediction 0.908074190797054 Functional Gain - ARL4D ENSG00000175906 CDS Human protein_coding chr17:41477310 chr17:41477310 synonymous SNV . 0 21 hPsi_associated_SNPs_105372 0 0 1 0 0 Cytosol 0 0.438848456334016 0.80617356300354 0 hPsi_site_4332 iPseU_CNN:0.80617356300354;iRNA_PseU:0 4333 chr19 16238297 16238297 1 + G A LUSC 16238297 - 16238277 16238317 41 GAAACTTGTCTCTTGTCATTCACATCACACTTGTTCCCGAG GAAACTTGTCTCTTGTCATTTACATCACACTTGTTCCCGAG Direct Gain 0 0.954024457778654 0 0.999998033046722 prediction 0.908048915557308 Functional Gain - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16238297 chr19:16238297 synonymous SNV . 0 21 hPsi_associated_SNPs_105373 0 0 0 0 0 Ribosome 0 0.438718527101468 0.999996066093444 0 hPsi_site_4333 iPseU_CNN:0.999996066093444;iRNA_PseU:0 4334 chr2 79348747 79348747 1 + G A UCEC 79348747 - 79348727 79348767 41 GTAGCAGTAGGAGCGATAGGCATTGGTGCCTTCTGGGCAGC GTAGCAGTAGGAGCGATAGGTATTGGTGCCTTCTGGGCAGC Direct Gain 0 0.95401436123185 0 0.873727679252625 prediction 0.908028722463699 Functional Gain - REG1A ENSG00000115386 CDS Human protein_coding chr2:79348747 chr2:79348747 nonsynonymous SNV 0.515 3 21 hPsi_associated_SNPs_105374 0 0 0 0 0 Ribosome 0 0.438721520994246 0.74745535850525 0 hPsi_site_4334 iPseU_CNN:0.74745535850525;iRNA_PseU:0 4335 chr11 6592590 6592590 1 + C T UCEC 6592590 + 6592570 6592610 41 AATTTCCCTGGTAGCCGAGGCTCGGTCTCCAGTCAGCTCCA AATTTCCCTGGTAGCCGAGGTTCGGTCTCCAGTCAGCTCCA Direct Gain 0 0.954010841280674 0 0.464922696352005 prediction 0.908021682561347 Functional Gain - DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6592590 chr11:6592590 synonymous SNV . 0 21 hPsi_associated_SNPs_105375 0 0 0 2 0 chromatin 0 0.438699430023615 0 0 hPsi_site_4335 iPseU_CNN:0;iRNA_PseU:0 4336 chr19 58101637 58101637 1 + C T HNSC 58101637 + 58101617 58101657 41 GAGGGACATGGACAGAGCCTCATATGTGAAGTGCTGCCTAT GAGGGACATGGACAGAGCCTTATATGTGAAGTGCTGCCTAT Direct Gain 0 0.954005859994815 0 0.919782161712646 prediction 0.908011719989631 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101637 chr19:58101637 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_105376 0 0 0 0 0 exosome 0 0.440290968856843 0.839564323425292 0 hPsi_site_4336 iPseU_CNN:0.839564323425292;iRNA_PseU:0 4337 chr1 248570369 248570369 1 + C A STAD 248570369 - 248570349 248570389 41 GACACCCTTTGAGGACCCTTGAACCTCCCCAAGGCCCTCTT GACACCCTTTGAGGACCCTTTAACCTCCCCAAGGCCCTCTT Direct Gain 0 0.953999928999514 0 0.999988675117493 prediction 0.907999857999028 Functional Gain - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248570369 chr1:248570369 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_105377 0 0 0 0 0 unknown 0 0.438718592995102 0.999977350234986 0 hPsi_site_4337 iPseU_CNN:0.999977350234986;iRNA_PseU:0 4338 chr11 64875072 64875072 1 + G A BLCA 64875072 - 64875052 64875092 41 TCCATCTTCCGGAAATCGTTCTTCATCTTCCGGATGGTGTC TCCATCTTCCGGAAATCGTTTTTCATCTTCCGGATGGTGTC Direct Gain 0 0.953998061401891 0 0.850229144096375 prediction 0.907996122803782 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64875072 chr11:64875072 synonymous SNV . 0 21 hPsi_associated_SNPs_105378 0 0 0 0 0 Ribosome 0 0.438718592972851 0.70045828819275 0 hPsi_site_4338 iPseU_CNN:0.70045828819275;iRNA_PseU:0 4339 chr15 42092078 42092078 1 + G A BLCA 42092078 - 42092058 42092098 41 AACTAAACCTGATCGGGGGTCACAGGCAAGTCCTCTGCCTC AACTAAACCTGATCGGGGGTTACAGGCAAGTCCTCTGCCTC Direct Gain 0 0.953997280038461 0 0.999468088150024 prediction 0.907994560076922 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42092078 chr15:42092078 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105379 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593018923 0.998936176300048 0 hPsi_site_4339 iPseU_CNN:0.998936176300048;iRNA_PseU:0 4340 chr1 158435384 158435384 1 + G T BLCA 158435384 + 158435364 158435404 41 AATAAGACTGTGGTGAGAGAGTTCGTCGTCCTCGGCTTCTC AATAAGACTGTGGTGAGAGATTTCGTCGTCCTCGGCTTCTC Direct Gain 0 0.953990662312113 0 0.999983668327332 prediction 0.907981324624227 Functional Gain - OR10K1 ENSG00000173285 CDS Human protein_coding chr1:158435384 chr1:158435384 nonsynonymous SNV 0.218 1 21 hPsi_associated_SNPs_105380 0 0 0 0 0 unknown 0 0.438719424481188 0.999967336654664 0 hPsi_site_4340 iPseU_CNN:0.999967336654664;iRNA_PseU:0 4341 chr17 41063167 41063167 1 + C T ACC 41063167 + 41063147 41063187 41 AGCCTCCTCAAGAACCTGGGCACGCTCTTTGGCCTGGGGCT AGCCTCCTCAAGAACCTGGGTACGCTCTTTGGCCTGGGGCT Direct Gain 0 0.953989323513629 0 0.999997794628143 prediction 0.907978647027259 Functional Gain - G6PC ENSG00000131482 CDS Human protein_coding chr17:41063167 chr17:41063167 synonymous SNV . 0 21 hPsi_associated_SNPs_105381 0 0 1 0 0 Nucleus 0 0.438718592995102 0.999995589256286 0 hPsi_site_4341 iPseU_CNN:0.999995589256286;iRNA_PseU:0 4342 chr16 29819018 29819018 1 + G A BLCA 29819018 - 29818998 29819038 41 ACCGGGCACTGGTAGGGCTTCTCGTCCGAGTGCGACAGCTT ACCGGGCACTGGTAGGGCTTTTCGTCCGAGTGCGACAGCTT Direct Gain 0 0.953988961506053 0 0.977492451667786 prediction 0.907977923012105 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819018 chr16:29819018 synonymous SNV . 0 21 hPsi_associated_SNPs_105382 0 0 0 0 0 Cytosol 0 0.4387178386796 0.954984903335572 0 hPsi_site_4342 iPseU_CNN:0.954984903335572;iRNA_PseU:0 4343 chr10 106917009 106917009 1 + G A SKCM 106917009 - 106916989 106917029 41 ACTGGGCTTCCTCTCAGGTCCACATCCGGAGCTTGCAGCAG ACTGGGCTTCCTCTCAGGTCTACATCCGGAGCTTGCAGCAG Direct Gain 0 0.953988790891498 0 0.610130906105042 prediction 0.907977581782996 Functional Gain - SORCS3 ENSG00000156395 CDS Human protein_coding chr10:106917009 chr10:106917009 synonymous SNV . 0 21 hPsi_associated_SNPs_105383 0 0 0 0 0 exosome 0 0.438718566456188 0.220261812210084 0 hPsi_site_4343 iPseU_CNN:0.220261812210084;iRNA_PseU:0 4344 chr11 93431671 93431671 1 + C A UCEC 93431671 - 93431651 93431691 41 AGGTGCCAGTCTGTTCAGAAGAAATTCTTTTCTCCAATTCA AGGTGCCAGTCTGTTCAGAATAAATTCTTTTCTCCAATTCA Direct Gain 0 0.953980507296714 0 0.999123811721802 prediction 0.907961014593428 Functional Gain - CEP295 ENSG00000166004 CDS Human protein_coding chr11:93431671 chr11:93431671 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_105384 0 0 0 0 0 Nucleus 0 0.440252789302078 0.998247623443604 0 hPsi_site_4344 iPseU_CNN:0.998247623443604;iRNA_PseU:0 4345 chr1 237993871 237993871 1 + C T UCEC 237993871 + 237993851 237993891 41 ATAGGCAATGATTACTTCGACACAGTGCCACATGGCTTTGA ATAGGCAATGATTACTTCGATACAGTGCCACATGGCTTTGA Direct Gain 0 0.953977110969155 0 0.843924105167389 prediction 0.90795422193831 Functional Gain - RYR2 ENSG00000198626 CDS Human protein_coding chr1:237993871 chr1:237993871 synonymous SNV . 0 21 hPsi_associated_SNPs_105385 0 0 0 0 2 nucleolus 0 0.438717974432915 0.687848210334778 0 hPsi_site_4345 iPseU_CNN:0.687848210334778;iRNA_PseU:0 4346 chr15 41862857 41862857 1 + C A LUAD 41862857 - 41862837 41862877 41 AGGGTGAACTGCTGCTCTGGGATGAGCACATCCTCCAGTTT AGGGTGAACTGCTGCTCTGGTATGAGCACATCCTCCAGTTT Direct Gain 0 0.95397413863766 0 0.999697744846344 prediction 0.90794827727532 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41862857 chr15:41862857 synonymous SNV . 0 21 hPsi_associated_SNPs_105386 0 0 0 0 0 Ribosome 0 0.438689810652512 0.999395489692688 0 hPsi_site_4346 iPseU_CNN:0.999395489692688;iRNA_PseU:0 4347 chr11 86648209 86648209 1 + C T rs10792892 86648209 + 86648189 86648229 41 AGAGGCTGAGTAAAGATTGTCATTTTGGTCAATGATTCTTA AGAGGCTGAGTAAAGATTGTTATTTTGGTCAATGATTCTTA Direct Gain 0 0.953959997700869 0 0.0192230641841888 prediction 0.907919995401737 Functional Gain - OR7E2P;FZD4 ENSG00000150687 intronic Human protein_coding chr11:86648209 chr11:86648209 . . 0 21 hPsi_associated_SNPs_105387 0 0 0 0 0 unknown 0 0.438708897627737 0 0 hPsi_site_4347 iPseU_CNN:0;iRNA_PseU:0 4348 chr11 20648259 20648259 1 + G T LUSC 20648259 + 20648239 20648279 41 CCATGGCTTTTCTAGGTGGTGTACTTCACGGCCACGTTCCC CCATGGCTTTTCTAGGTGGTTTACTTCACGGCCACGTTCCC Direct Gain 0 0.95395559679579 0 0.999908208847046 prediction 0.90791119359158 Functional Gain - SLC6A5 ENSG00000165970 CDS Human protein_coding chr11:20648259 chr11:20648259 synonymous SNV . 0 21 hPsi_associated_SNPs_105388 0 0 0 0 1 unknown 0 0.438718592995102 0.999816417694092 0 hPsi_site_4348 iPseU_CNN:0.999816417694092;iRNA_PseU:0 4349 chr7 6786744 6786744 1 + G A COAD 6786744 - 6786724 6786764 41 GCTCAGCATGAAGATCAGTTCATCGACGTCCTGGGGTCCGA GCTCAGCATGAAGATCAGTTTATCGACGTCCTGGGGTCCGA Direct Gain 0 0.953955083542568 0 0.999923944473267 prediction 0.907910167085136 Functional Gain - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6786744 chr7:6786744 . . 0 21 hPsi_associated_SNPs_105389 0 0 0 0 0 unknown 0 0.440514363865244 0.999847888946534 0 hPsi_site_4349 iPseU_CNN:0.999847888946534;iRNA_PseU:0 4350 chr5 82841383 82841383 1 + G A UCEC 82841383 - 82841363 82841403 41 AACAGGTGCCTCCGTTAAGGCACGGGTTCATTTTGCAGCGA AACAGGTGCCTCCGTTAAGGTACGGGTTCATTTTGCAGCGA Direct Gain 0 0.953953957837939 0 0.966414332389832 prediction 0.907907915675877 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82841383 chr5:82841383 nonsynonymous SNV 0.993 5 21 hPsi_associated_SNPs_105390 0 0 0 0 0 Ribosome 0 0.438756239860577 0.932828664779664 0 hPsi_site_4350 iPseU_CNN:0.932828664779664;iRNA_PseU:0 4351 chr10 105178389 105178389 1 + G T LUAD 105178389 + 105178369 105178409 41 TGAGCCAGAGCGAGGGGCGTGTTGTATCCTTGACTGGTATC TGAGCCAGAGCGAGGGGCGTTTTGTATCCTTGACTGGTATC Direct Gain 0 0.953942845604221 0 0.0203971266746521 prediction 0.907885691208442 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105178389 chr10:105178389 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_105391 0 0 1 0 1 Nucleus 0 0.438718592994875 0 0 hPsi_site_4351 iPseU_CNN:0;iRNA_PseU:0 4352 chr1 248112360 248112360 1 + C T SKCM 248112360 + 248112340 248112380 41 CTACTGAGTCAGCTCTCCCTCATTGACCTAAATTACATCTC CTACTGAGTCAGCTCTCCCTTATTGACCTAAATTACATCTC Direct Gain 0 0.953938945048018 0 0.948824107646942 prediction 0.907877890096035 Functional Gain - OR2L8 ENSG00000196936 CDS Human other chr1:248112360 chr1:248112360 synonymous SNV . 0 21 hPsi_associated_SNPs_105392 0 0 0 0 0 unknown 0 0.438726691705551 0.897648215293884 0 hPsi_site_4352 iPseU_CNN:0.897648215293884;iRNA_PseU:0 4353 chr1 225586901 225586901 1 + C A rs114514795 225586901 - 225586881 225586921 41 GACTAGGAGGTTTCTTCGTTGATAAATACACTGATGTTAAA GACTAGGAGGTTTCTTCGTTTATAAATACACTGATGTTAAA Direct Gain 0 0.953932817458674 0 0.978241324424744 prediction 0.907865634917348 Functional Gain - DNAH14 ENSG00000185842 CDS Human protein_coding chr1:225586901 chr1:225586901 stopgain 0.523 0 21 hPsi_associated_SNPs_105393 0 0 1 0 0 Cytosol 0 0.438718701525936 0.956482648849488 0 hPsi_site_4353 iPseU_CNN:0.956482648849488;iRNA_PseU:0 4354 chr1 155296591 155296591 1 + C T STAD 155296591 + 155296571 155296611 41 CTGCAGCAGACTATGCAAGCCATGCTGCACTTTGGGGGCCG CTGCAGCAGACTATGCAAGCTATGCTGCACTTTGGGGGCCG Direct Gain 0 0.95393111323607 0 0.257867425680161 prediction 0.90786222647214 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155296591 chr1:155296591 synonymous SNV . 0 21 hPsi_associated_SNPs_105394 0 0 1 0 0 Cytosol 0 0.438724302359315 0 0 hPsi_site_4354 iPseU_CNN:0;iRNA_PseU:0 4355 chr10 105037912 105037912 1 + A T COAD 105037912 + 105037892 105037932 41 CCGCGAGGAGATCCACGAGTATCGGCGCCAGCTGCAGGCGC CCGCGAGGAGATCCACGAGTTTCGGCGCCAGCTGCAGGCGC Direct Gain 0 0.953929435464505 0 0.836265325546265 prediction 0.907858870929011 Functional Gain - INA ENSG00000148798 CDS Human protein_coding chr10:105037912 chr10:105037912 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_105395 0 0 0 0 0 exosome 0 0.438742914946726 0.67253065109253 0 hPsi_site_4355 iPseU_CNN:0.67253065109253;iRNA_PseU:0 4356 chr17 77083959 77083959 1 + C T rs141305001 77083959 + 77083939 77083979 41 AGCTGAAATCCACCTGTCTCCATCTTCCTTGCCTGCCTGGG AGCTGAAATCCACCTGTCTCTATCTTCCTTGCCTGCCTGGG Direct Gain 0 0.953913163564716 0 0.901479005813599 prediction 0.907826327129432 Functional Gain - ENGASE ENSG00000167280 UTR3 Human protein_coding chr17:77083959 chr17:77083959 . . 0 21 hPsi_associated_SNPs_105396 0 0 1 0 0 chromatin 0 0.438718561221201 0.802958011627198 0 hPsi_site_4356 iPseU_CNN:0.802958011627198;iRNA_PseU:0 4357 chr17 7318136 7318136 1 + C T UCEC 7318136 + 7318116 7318156 41 GGGGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCTCCCA GGGGCAGGGGCCTCCTGCGTTAACCTTCTGATCCTCTCCCA Direct Gain 0 0.953913056251629 0 0.961559891700745 prediction 0.907826112503259 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318136 chr17:7318136 synonymous SNV . 0 21 hPsi_associated_SNPs_105397 0 0 1 0 1 chromatin 0 0.438718489747268 0.92311978340149 0 hPsi_site_4357 iPseU_CNN:0.92311978340149;iRNA_PseU:0 4358 chr14 92920320 92920320 1 + C T COAD 92920320 + 92920300 92920340 41 AGCTCCAGCCCTCCCAAGTTCACCTTCCCTGAAGCAGGCTT AGCTCCAGCCCTCCCAAGTTTACCTTCCCTGAAGCAGGCTT Direct Gain 0 0.953902930880465 0 0.391886502504349 prediction 0.907805861760931 Functional Gain - SLC24A4 ENSG00000140090 CDS Human protein_coding chr14:92920320 chr14:92920320 synonymous SNV . 0 21 hPsi_associated_SNPs_105398 0 0 0 0 2 exosome 0 0.438718608770008 0 0 hPsi_site_4358 iPseU_CNN:0;iRNA_PseU:0 4359 chr22 35943073 35943073 1 + G T LUSC 35943073 + 35943053 35943093 41 TGTACCAGCTCGACATCCTGGATACCTCTGGCAACCACCCC TGTACCAGCTCGACATCCTGTATACCTCTGGCAACCACCCC Direct Gain 0 0.953890702318977 0 0.999749898910522 prediction 0.907781404637955 Functional Gain - RASD2 ENSG00000100302 CDS Human protein_coding chr22:35943073 chr22:35943073 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105399 0 0 0 0 1 exosome 0 0.438718378927737 0.999499797821044 0 hPsi_site_4359 iPseU_CNN:0.999499797821044;iRNA_PseU:0 4360 chr9 32408557 32408557 1 + G A LUSC 32408557 - 32408537 32408577 41 GGATCTCCTCCTAACTTTTTCACAGCATCACGCATTGCAGC GGATCTCCTCCTAACTTTTTTACAGCATCACGCATTGCAGC Direct Gain 0 0.953864179401502 0 0.973692893981934 prediction 0.907728358803005 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32408557 chr9:32408557 synonymous SNV . 0 21 hPsi_associated_SNPs_105400 0 0 0 0 0 Ribosome 0 0.438720002930881 0.947385787963868 0 hPsi_site_4360 iPseU_CNN:0.947385787963868;iRNA_PseU:0 4361 chr3 98110153 98110153 1 + C T COAD 98110153 + 98110133 98110173 41 CTTTACTATAGTCTTAGTTTCTTATTTCTACATCCTTTTCA CTTTACTATAGTCTTAGTTTTTTATTTCTACATCCTTTTCA Direct Gain 0 0.953861155264827 0 0.0111319422721863 prediction 0.907722310529654 Functional Gain - OR5K3 ENSG00000206536 CDS Human protein_coding chr3:98110153 chr3:98110153 nonsynonymous SNV 0.758 3 21 hPsi_associated_SNPs_105401 0 0 0 0 0 unknown 0 0.438718867870242 0 0 hPsi_site_4361 iPseU_CNN:0;iRNA_PseU:0 4362 chr19 42818443 42818443 1 + G A SKCM 42818443 - 42818423 42818463 41 AATCCGAGAGGAAACAAAATCTTGTCAGGAACACCCAGTCC AATCCGAGAGGAAACAAAATTTTGTCAGGAACACCCAGTCC Direct Gain 0 0.953849003593353 0 0.392005920410156 prediction 0.907698007186706 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42818443 chr19:42818443 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105402 0 0 0 0 0 nucleoplasm 0 0.43871856702659 0 0 hPsi_site_4362 iPseU_CNN:0;iRNA_PseU:0 4363 chr17 60813847 60813847 1 + G T COAD 60813847 + 60813827 60813867 41 AATTCACTGATGATCTTGGAGATATTGGTCTGCCAGAAATA AATTCACTGATGATCTTGGATATATTGGTCTGCCAGAAATA Direct Gain 0 0.953848276737007 0 0.291083961725235 prediction 0.907696553474013 Functional Gain - MARCH10 ENSG00000173838 CDS Human protein_coding chr17:60813847 chr17:60813847 nonsynonymous SNV 0.150 2 21 hPsi_associated_SNPs_105403 0 0 0 0 0 nucleus 0 0.438807585687465 0 0 hPsi_site_4363 iPseU_CNN:0;iRNA_PseU:0 4364 chr5 99871368 99871368 1 + C T UCEC 99871368 + 99871348 99871388 41 GGCCGCGCCAGGTCTTGGGCCTCCTGACCCTAGACCACGGA GGCCGCGCCAGGTCTTGGGCTTCCTGACCCTAGACCACGGA Direct Gain 0 0.953847582208094 0 0.987210273742676 prediction 0.907695164416188 Functional Gain - FAM174A ENSG00000174132 CDS Human protein_coding chr5:99871368 chr5:99871368 nonsynonymous SNV 0.007 2 21 hPsi_associated_SNPs_105404 0 0 0 0 0 Cytosol 0 0.438718593052526 0.974420547485352 0 hPsi_site_4364 iPseU_CNN:0.974420547485352;iRNA_PseU:0 4365 chr1 53546508 53546508 1 + G A UCEC 53546508 - 53546488 53546528 41 GTTGGGCGTGGAGTCGAAGGCATTGGCGGGCACCGCACTAA GTTGGGCGTGGAGTCGAAGGTATTGGCGGGCACCGCACTAA Direct Gain 0 0.953845310931056 0 0.97733336687088 prediction 0.907690621862113 Functional Gain - PODN ENSG00000174348 CDS Human protein_coding chr1:53546508 chr1:53546508 nonsynonymous SNV 0.846 3 21 hPsi_associated_SNPs_105405 0 0 0 0 0 Cytosol 0 0.438482816297826 0.95466673374176 0 hPsi_site_4365 iPseU_CNN:0.95466673374176;iRNA_PseU:0 4366 chrX 123045507 123045507 1 + G T rs765311366 123045507 + 123045487 123045527 41 CACTGTACTCCAGTCTGGGTGACAGAGTGAGACCCCATCTC CACTGTACTCCAGTCTGGGTTACAGAGTGAGACCCCATCTC Direct Gain 0 0.953842657369405 0 0.065868467092514 prediction 0.907685314738809 Functional Gain - XIAP ENSG00000101966 UTR3 Human protein_coding chrX:123045507 chrX:123045507 . . 0 21 hPsi_associated_SNPs_105406 0 0 1 0 0 Cytosol 0 0.434636151377832 0 0 hPsi_site_4366 iPseU_CNN:0;iRNA_PseU:0 4367 chr19 9271774 9271774 1 + G T SARC 9271774 + 9271754 9271794 41 CCTGCGGGAAAGTCTTCGGTGACTATTTATCCCGGCGGAGG CCTGCGGGAAAGTCTTCGGTTACTATTTATCCCGGCGGAGG Direct Gain 0 0.953840505933328 0 0.988275647163391 prediction 0.907681011866656 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271774 chr19:9271774 nonsynonymous SNV 0.370 3 21 hPsi_associated_SNPs_105407 0 0 1 0 0 Nucleus 0 0.43871882626744 0.976551294326782 0 hPsi_site_4367 iPseU_CNN:0.976551294326782;iRNA_PseU:0 4368 chr9 22451104 22451104 1 + G A UCEC 22451104 - 22451084 22451124 41 GGATTTGGAGATCAGTTCTTCTTGTCCATTCTGGCATGACT GGATTTGGAGATCAGTTCTTTTTGTCCATTCTGGCATGACT Direct Gain 0 0.953839919465505 0 0.81540846824646 prediction 0.907679838931009 Functional Gain - DMRTA1 ENSG00000176399 CDS Human protein_coding chr9:22451104 chr9:22451104 nonsynonymous SNV 0.973 0 21 hPsi_associated_SNPs_105408 0 0 0 0 0 exosome 0 0.437502208134561 0.63081693649292 0 hPsi_site_4368 iPseU_CNN:0.63081693649292;iRNA_PseU:0 4369 chr4 94006212 94006212 1 + C A LUSC 94006212 - 94006192 94006232 41 CGTCTGCCAAAGACTGGAGGGATCCTGCTGACGTGCAGCCA CGTCTGCCAAAGACTGGAGGTATCCTGCTGACGTGCAGCCA Direct Gain 0 0.953834557961525 0 0.917231023311615 prediction 0.907669115923049 Functional Gain - GRID2 ENSG00000152208 CDS Human protein_coding chr4:94006212 chr4:94006212 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105409 0 0 0 0 0 exosome 0 0.438687250016638 0.83446204662323 0 hPsi_site_4369 iPseU_CNN:0.83446204662323;iRNA_PseU:0 4370 chr16 53878094 53878094 1 + C T BLCA 53878094 + 53878074 53878114 41 AGAGGAAAGTGAGGATGACTCTCATCTCGAAGGCAGGGATC AGAGGAAAGTGAGGATGACTTTCATCTCGAAGGCAGGGATC Direct Gain 0 0.953832787479718 0 0.990436673164368 prediction 0.907665574959436 Functional Gain - FTO ENSG00000140718 CDS Human protein_coding chr16:53878094 chr16:53878094 nonsynonymous SNV 0.097 0 21 hPsi_associated_SNPs_105410 0 0 1 0 1 Nucleus 0 0.438718318176388 0.980873346328736 0 hPsi_site_4370 iPseU_CNN:0.980873346328736;iRNA_PseU:0 4371 chr1 207300085 207300085 1 + C T SKCM 207300085 + 207300065 207300105 41 CTGTCGCAAGCCAGATGTTTCACATGGGGAAATGGTCTCTG CTGTCGCAAGCCAGATGTTTTACATGGGGAAATGGTCTCTG Direct Gain 0 0.953832375855624 0 0.963658332824707 prediction 0.907664751711248 Functional Gain - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207300085 chr1:207300085 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105411 0 0 0 0 1 Endoplasmic reticulum 0 0.43871979899909 0.927316665649414 0 hPsi_site_4371 iPseU_CNN:0.927316665649414;iRNA_PseU:0 4372 chr19 56160593 56160593 1 + G T COAD 56160593 + 56160573 56160613 41 AAGGACGATGAGACCTTCGAGATCTCCATTCCCTTCGATGA AAGGACGATGAGACCTTCGATATCTCCATTCCCTTCGATGA Direct Gain 0 0.953831824310305 0 0.999451816082001 prediction 0.90766364862061 Functional Gain - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56160593 chr19:56160593 nonsynonymous SNV 0.981 1 21 hPsi_associated_SNPs_105412 0 0 0 0 1 Cytosol 0 0.438585987835512 0.998903632164002 0 hPsi_site_4372 iPseU_CNN:0.998903632164002;iRNA_PseU:0 4373 chr5 140475983 140475983 1 + G A SKCM 140475983 - 140475963 140476003 41 CAACGCCGGGGAGCCGCGGTCTGCGGCGCCCACGCGGAACT CAACGCCGGGGAGCCGCGGTTTGCGGCGCCCACGCGGAACT Direct Gain 0 0.953831547503486 0 0.998984694480896 prediction 0.907663095006971 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475983 chr5:140475983 nonsynonymous SNV 0.008 3 21 hPsi_associated_SNPs_105413 0 0 0 0 0 exosome 0 0.438681736259166 0.997969388961792 0 hPsi_site_4373 iPseU_CNN:0.997969388961792;iRNA_PseU:0 4374 chr4 106647744 106647744 1 + C A LUSC 106647744 - 106647724 106647764 41 TTCTCAGAAAATTTCCTGCTGATAATTACCTAGGTAGGAAA TTCTCAGAAAATTTCCTGCTTATAATTACCTAGGTAGGAAA Direct Gain 0 0.953831033502492 0 0.0260573923587799 prediction 0.907662067004984 Functional Gain - GSTCD ENSG00000138780 CDS Human protein_coding chr4:106647744 chr4:106647744 synonymous SNV . 0 21 hPsi_associated_SNPs_105414 0 0 0 0 0 Ribosome 0 0.438718687670021 0 0 hPsi_site_4374 iPseU_CNN:0;iRNA_PseU:0 4375 chr1 175113525 175113525 1 + G T LUSC 175113525 + 175113505 175113545 41 GTCTCTTCTCTCCTGCAGGGGATGCTCTTACTTACCACAAT GTCTCTTCTCTCCTGCAGGGTATGCTCTTACTTACCACAAT Direct Gain 0 0.95382378405061 0 0.00230816006660461 prediction 0.907647568101219 Functional Gain - TNN ENSG00000120332 CDS Human protein_coding chr1:175113525 chr1:175113525 nonsynonymous SNV 0.967 5 21 hPsi_associated_SNPs_105415 0 0 0 0 1 exosome 0 0.438822958727425 0 0 hPsi_site_4375 iPseU_CNN:0;iRNA_PseU:0 4376 chr17 74538650 74538650 1 + G A HNSC 74538650 - 74538630 74538670 41 GCAGAGGTGAGGGCTTACTTCAGAGGTTCTTTCTCCCTAAA GCAGAGGTGAGGGCTTACTTTAGAGGTTCTTTCTCCCTAAA Direct Gain 0 0.953822755253993 0 0.929785013198853 prediction 0.907645510507986 Functional Gain - PRCD ENSG00000214140 CDS Human protein_coding chr17:74538650 chr17:74538650 synonymous SNV . 0 21 hPsi_associated_SNPs_105416 0 0 0 0 0 exosome 0 0.438718592188045 0.859570026397706 0 hPsi_site_4376 iPseU_CNN:0.859570026397706;iRNA_PseU:0 4377 chr8 120942092 120942092 1 + C T LUSC 120942092 + 120942072 120942112 41 GAATTCAAGGATGTCAAACTCTTCTACCGCTTTAGAAAGGA GAATTCAAGGATGTCAAACTTTTCTACCGCTTTAGAAAGGA Direct Gain 0 0.953821313971332 0 0.977902173995972 prediction 0.907642627942664 Functional Gain - DEPTOR ENSG00000155792 CDS Human protein_coding chr8:120942092 chr8:120942092 synonymous SNV . 0 21 hPsi_associated_SNPs_105417 0 0 0 0 1 exosome 0 0.438718715522738 0.955804347991944 0 hPsi_site_4377 iPseU_CNN:0.955804347991944;iRNA_PseU:0 4378 chr22 41574069 41574069 1 + G A UCEC 41574069 - 41574049 41574089 41 TGGACCCCCTGCTGACCTGGCATGGTAGGTGGCTGTAGCCC TGGACCCCCTGCTGACCTGGTATGGTAGGTGGCTGTAGCCC Direct Gain 0 0.95382005391301 0 0.999992549419403 prediction 0.90764010782602 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41574069 chr22:41574069 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_105418 0 0 0 0 0 Cytosol 0 0.438718823396017 0.999985098838806 0 hPsi_site_4378 iPseU_CNN:0.999985098838806;iRNA_PseU:0 4379 chr12 109838916 109838916 1 + C T LUAD 109838916 + 109838896 109838936 41 AGGGCATTCCCGTAGGTGGGCATATCATCAGTTACTTGATA AGGGCATTCCCGTAGGTGGGTATATCATCAGTTACTTGATA Direct Gain 0 0.953813934592601 0 0.819043457508087 prediction 0.907627869185201 Functional Gain - MYO1H ENSG00000174527 CDS Human protein_coding chr12:109838916 chr12:109838916 nonsynonymous SNV 0.938 3 21 hPsi_associated_SNPs_105419 0 0 0 0 1 exosome 0 0.438714401937898 0.638086915016174 0 hPsi_site_4379 iPseU_CNN:0.638086915016174;iRNA_PseU:0 4380 chr7 34917691 34917691 1 + C T CESC 34917691 + 34917671 34917711 41 CCTTTCTTCTTTCCCAGGGTCATCCGTCTCCGTCAGCTCCA CCTTTCTTCTTTCCCAGGGTTATCCGTCTCCGTCAGCTCCA Direct Gain 0 0.9538106498388 0 0.000272423028945923 prediction 0.907621299677601 Functional Gain - NPSR1 ENSG00000187258 CDS Human protein_coding chr7:34917691 chr7:34917691 synonymous SNV . 0 21 hPsi_associated_SNPs_105420 0 0 0 0 0 Nucleus 0 0.438718592809977 0 0 hPsi_site_4380 iPseU_CNN:0;iRNA_PseU:0 4381 chr15 62995052 62995052 1 + G A BLCA 62995052 - 62995032 62995072 41 ATATCTTACCTGGAATCGCTCATCAGTCTCATTCTCTCCAA ATATCTTACCTGGAATCGCTTATCAGTCTCATTCTCTCCAA Direct Gain 0 0.953808521869608 0 0.999803185462952 prediction 0.907617043739217 Functional Gain - TLN2 ENSG00000171914 CDS Human protein_coding chr15:62995052 chr15:62995052 nonsynonymous SNV 0.755 1 21 hPsi_associated_SNPs_105421 0 0 0 0 0 Nucleus 0 0.438718592551325 0.999606370925904 0 hPsi_site_4381 iPseU_CNN:0.999606370925904;iRNA_PseU:0 4382 chr9 841731 841731 1 + C T rs149965643 841731 + 841711 841751 41 TCCGGCTGCAGCGCACACGTCTCCTGCGCCTCCTCCTCCGG TCCGGCTGCAGCGCACACGTTTCCTGCGCCTCCTCCTCCGG Direct Gain 0 0.953797392122723 0 0.999945402145386 prediction 0.907594784245445 Functional Gain - DMRT1 ENSG00000137090 UTR5 Human protein_coding chr9:841731 chr9:841731 . . 0 21 hPsi_associated_SNPs_105422 0 0 0 0 0 unknown 0 0.438718261813862 0.999890804290772 0 hPsi_site_4382 iPseU_CNN:0.999890804290772;iRNA_PseU:0 4383 chr19 2810741 2810741 1 + G T LGG 2810741 + 2810721 2810761 41 TATGCGCGGCTCTGCCAGGAGATCCTCGGGGTCCCGGCCAC TATGCGCGGCTCTGCCAGGATATCCTCGGGGTCCCGGCCAC Direct Gain 0 0.953792283342879 0 0.98729395866394 prediction 0.907584566685757 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810741 chr19:2810741 nonsynonymous SNV 0.941 0 21 hPsi_associated_SNPs_105423 0 0 1 0 1 Ribosome 0 0.438718726840704 0.97458791732788 0 hPsi_site_4383 iPseU_CNN:0.97458791732788;iRNA_PseU:0 4384 chr7 148497645 148497645 1 + G A ESCA 148497645 - 148497625 148497665 41 GTAACTGTAGGTGTCCTTTTCACCATCCACTCGCTCCAAAT GTAACTGTAGGTGTCCTTTTTACCATCCACTCGCTCCAAAT Direct Gain 0 0.953792135561129 0 0.996360063552856 prediction 0.907584271122258 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148497645 chr7:148497645 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_105424 0 0 0 0 0 Nucleus 0 0.438719032180078 0.992720127105712 0 hPsi_site_4384 iPseU_CNN:0.992720127105712;iRNA_PseU:0 4385 chr9 78796493 78796493 1 + C T BLCA 78796493 + 78796473 78796513 41 TACTCACTGCCCTGATGGGTCATATCAGGATACCAGTAAGC TACTCACTGCCCTGATGGGTTATATCAGGATACCAGTAAGC Direct Gain 0 0.953791952742127 0 0.999477028846741 prediction 0.907583905484254 Functional Gain - PCSK5 ENSG00000099139 CDS Human protein_coding chr9:78796493 chr9:78796493 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105425 0 0 0 0 1 exosome 0 0.438726507927153 0.998954057693482 0 hPsi_site_4385 iPseU_CNN:0.998954057693482;iRNA_PseU:0 4386 chr14 62463041 62463041 1 + G A LAML 62463041 - 62463021 62463061 41 GCTTGGGCTTGAATTTTGGGCAGAGTCCTGCAAATCACTAT GCTTGGGCTTGAATTTTGGGTAGAGTCCTGCAAATCACTAT Direct Gain 0 0.953788919781483 0 0.997756242752075 prediction 0.907577839562965 Functional Gain - SYT16 ENSG00000139973 CDS Human protein_coding chr14:62463041 chr14:62463041 nonsynonymous SNV 0.957 0 21 hPsi_associated_SNPs_105426 0 0 0 0 0 exosome 0 0.438718540211546 0.99551248550415 0 hPsi_site_4386 iPseU_CNN:0.99551248550415;iRNA_PseU:0 4387 chr19 22272454 22272454 1 + T A rs4932954 22272454 - 22272434 22272474 41 AGTAAGAGTTGAGAACTGGGAAGAGGCTATGCCACATTCAT AGTAAGAGTTGAGAACTGGGTAGAGGCTATGCCACATTCAT Direct Gain 0 0.953787545036904 0 0.744455397129059 prediction 0.907575090073808 Functional Gain - ZNF257 ENSG00000197134 UTR3 Human protein_coding chr19:22272454 chr19:22272454 . . 0 21 hPsi_associated_SNPs_105427 0 0 0 0 0 chromatin 0 0.438718605980325 0.488910794258118 0 hPsi_site_4387 iPseU_CNN:0.488910794258118;iRNA_PseU:0 4388 chr8 77763458 77763458 1 + T A OV 77763458 - 77763438 77763478 41 TTAAAGCCTGGAATGTACGGAAACTGCGCTGGCAGAGGTTA TTAAAGCCTGGAATGTACGGTAACTGCGCTGGCAGAGGTTA Direct Gain 0 0.953767297546804 0 0.998799324035645 prediction 0.907534595093609 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77763458 chr8:77763458 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105428 0 0 0 0 0 Ribosome 0 0.43871764175909 0.99759864807129 0 hPsi_site_4388 iPseU_CNN:0.99759864807129;iRNA_PseU:0 4389 chr13 44455356 44455356 1 + G T LUAD 44455356 + 44455336 44455376 41 TCTTGGAAGAATTTGAGATTGTTAGCTGTCCCAGCATGGCT TCTTGGAAGAATTTGAGATTTTTAGCTGTCCCAGCATGGCT Direct Gain 0 0.953766911364107 0 0.867550432682037 prediction 0.907533822728215 Functional Gain - LACC1 ENSG00000179630 CDS Human protein_coding chr13:44455356 chr13:44455356 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_105429 0 0 0 0 0 exosome 0 0.438724175103939 0.735100865364074 0 hPsi_site_4389 iPseU_CNN:0.735100865364074;iRNA_PseU:0 4390 chr3 44700902 44700902 1 + C T SKCM 44700902 + 44700882 44700922 41 TTTACTAGGAGCTCAAACCTCATTGTCCACCAGAGGATCCA TTTACTAGGAGCTCAAACCTTATTGTCCACCAGAGGATCCA Direct Gain 0 0.953766678923982 0 0.99680483341217 prediction 0.907533357847964 Functional Gain - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700902 chr3:44700902 synonymous SNV . 0 21 hPsi_associated_SNPs_105430 0 0 1 0 0 Cytosol 0 0.438718595926636 0.99360966682434 0 hPsi_site_4390 iPseU_CNN:0.99360966682434;iRNA_PseU:0 4391 chr2 31489165 31489165 1 + G A rs148671842 31489165 - 31489145 31489185 41 ATCTGGATGGGCCGCTGTGACTCCTCCTGGCGCACTAGCAC ATCTGGATGGGCCGCTGTGATTCCTCCTGGCGCACTAGCAC Direct Gain 0 0.953765824723334 0 0.996903836727142 prediction 0.907531649446668 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31489165 chr2:31489165 synonymous SNV . 0 21 hPsi_associated_SNPs_105431 0 0 0 0 0 exosome 0 0.438718569130489 0.993807673454284 0 hPsi_site_4391 iPseU_CNN:0.993807673454284;iRNA_PseU:0 4392 chr9 137300036 137300036 1 + C T LUSC 137300036 + 137300016 137300056 41 GTCAGCAGCAGCGAGGACATCAAGCCCCCCCTGGGCCTCAA GTCAGCAGCAGCGAGGACATTAAGCCCCCCCTGGGCCTCAA Direct Gain 0 0.953761538850506 0 0.981035470962524 prediction 0.907523077701012 Functional Gain - RXRA ENSG00000186350 CDS Human protein_coding chr9:137300036 chr9:137300036 synonymous SNV . 0 21 hPsi_associated_SNPs_105432 0 0 1 0 1 Cytosol 0 0.43871770877941 0.962070941925048 0 hPsi_site_4392 iPseU_CNN:0.962070941925048;iRNA_PseU:0 4393 chr21 27086676 27086676 1 + C T rs150373123 27086676 + 27086656 27086696 41 AAATACAAAAATTAGCTGGGCATGGTGGCATGTGCCTGCAG AAATACAAAAATTAGCTGGGTATGGTGGCATGTGCCTGCAG Direct Gain 0 0.953759256612575 0 0.944224655628204 prediction 0.90751851322515 Functional Gain - JAM2 ENSG00000154721 UTR3 Human protein_coding chr21:27086676 chr21:27086676 . . 0 21 hPsi_associated_SNPs_105433 0 0 0 0 0 nucleus 0 0.438708333645911 0.888449311256408 0 hPsi_site_4393 iPseU_CNN:0.888449311256408;iRNA_PseU:0 4394 chr9 84534432 84534432 1 + C A LUAD 84534432 - 84534412 84534452 41 GGGAGCTGTGTAGTTGCGGGGATAGCCCTGGAAAGGCTCTG GGGAGCTGTGTAGTTGCGGGTATAGCCCTGGAAAGGCTCTG Direct Gain 0 0.953755409136492 0 0.938338816165924 prediction 0.907510818272985 Functional Gain - SPATA31D5P ENSG00000240632 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:84534432 chr9:84534432 . . 0 21 hPsi_associated_SNPs_105434 0 0 0 0 0 unknown 0 0.438718592974478 0.876677632331848 0 hPsi_site_4394 iPseU_CNN:0.876677632331848;iRNA_PseU:0 4395 chr2 86705788 86705788 1 + C T LGG 86705788 + 86705768 86705808 41 AGCGAAATGGGGAATAAAGGCAAACTGCCCTTGTTCAAACA AGCGAAATGGGGAATAAAGGTAAACTGCCCTTGTTCAAACA Direct Gain 0 0.953751845313767 0 0.992749452590942 prediction 0.907503690627534 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86705788 chr2:86705788 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105435 0 0 1 0 2 chromatin 0 0.438718592995102 0.985498905181884 0 hPsi_site_4395 iPseU_CNN:0.985498905181884;iRNA_PseU:0 4396 chr5 139742606 139742606 1 + C A COAD 139742606 - 139742586 139742626 41 TGGGCGGGGGAATCCGGGCTGTTGGGTCCCACCGACCTGGG TGGGCGGGGGAATCCGGGCTTTTGGGTCCCACCGACCTGGG Direct Gain 0 0.953745195619078 0 0.998166799545288 prediction 0.907490391238156 Functional Gain - SLC4A9 ENSG00000113073 CDS Human protein_coding chr5:139742606 chr5:139742606 nonsynonymous SNV 0.903 3 21 hPsi_associated_SNPs_105436 0 0 0 0 0 unknown 0 0.43871859309779 0.996333599090576 0 hPsi_site_4396 iPseU_CNN:0.996333599090576;iRNA_PseU:0 4397 chr2 80101255 80101255 1 + G A BLCA 80101255 - 80101235 80101275 41 AGCATTGTGGCATTCTTCTTCAGAGCCCCTCGGGCGGCTGC AGCATTGTGGCATTCTTCTTTAGAGCCCCTCGGGCGGCTGC Direct Gain 0 0.95374110010271 0 0.991276979446411 prediction 0.90748220020542 Functional Gain - CTNNA2 ENSG00000066032 CDS Human protein_coding chr2:80101255 chr2:80101255 synonymous SNV . 0 21 hPsi_associated_SNPs_105437 0 0 0 0 0 nucleoplasm 0 0.438718592995117 0.982553958892822 0 hPsi_site_4397 iPseU_CNN:0.982553958892822;iRNA_PseU:0 4398 chr19 12780828 12780828 1 + G A BLCA 12780828 - 12780808 12780848 41 GGGTTCCACAGCTTCAGCGTCTTGTCACTGCCGCACGTCAG GGGTTCCACAGCTTCAGCGTTTTGTCACTGCCGCACGTCAG Direct Gain 0 0.953741053044752 0 0.866559147834778 prediction 0.907482106089504 Functional Gain - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12780828 chr19:12780828 synonymous SNV . 0 21 hPsi_associated_SNPs_105438 0 0 0 0 0 chromatin 0 0.438718880395444 0.733118295669556 0 hPsi_site_4398 iPseU_CNN:0.733118295669556;iRNA_PseU:0 4399 chr19 52719863 52719863 1 + G A COAD 52719863 - 52719843 52719883 41 GAGGTGCTCGATGGTGTTGTCTTTGCCCAAGATGGGAGAGA GAGGTGCTCGATGGTGTTGTTTTTGCCCAAGATGGGAGAGA Direct Gain 0 0.95373918698308 0 0.429473459720612 prediction 0.907478373966159 Functional Gain - PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52719863 chr19:52719863 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105439 0 0 0 0 0 Ribosome 0 0.438718629108451 0 0 hPsi_site_4399 iPseU_CNN:0;iRNA_PseU:0 4400 chr1 116607106 116607106 1 + A T HNSC 116607106 + 116607086 116607126 41 TCTCCCGAGTTGGTGGGATTATTGCTCCCTTCATCCCCTCA TCTCCCGAGTTGGTGGGATTTTTGCTCCCTTCATCCCCTCA Direct Gain 0 0.953730137725828 0 0.557047128677368 prediction 0.907460275451656 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116607106 chr1:116607106 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_105440 0 0 1 0 2 cytosol 0 0.438730500123038 0.114094257354736 0 hPsi_site_4400 iPseU_CNN:0.114094257354736;iRNA_PseU:0 4401 chr1 114515811 114515811 1 + C T BLCA 114515811 + 114515791 114515831 41 ACCTTGCCCCGGCCCCTGCTCACCTGCCAAGCCAGGCTCAT ACCTTGCCCCGGCCCCTGCTTACCTGCCAAGCCAGGCTCAT Direct Gain 0 0.953724610361013 0 0.999928593635559 prediction 0.907449220722025 Functional Gain - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114515811 chr1:114515811 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105441 0 0 1 0 0 Cytosol 0 0.438718407496292 0.999857187271118 0 hPsi_site_4401 iPseU_CNN:0.999857187271118;iRNA_PseU:0 4402 chrX 24562394 24562394 1 + C T rs554072376 24562394 + 24562374 24562414 41 TGGGAGACAGATCCTCTTTGCATTTCCCCATTCCCACTAGT TGGGAGACAGATCCTCTTTGTATTTCCCCATTCCCACTAGT Direct Gain 0 0.953695893808907 0 0.981093108654022 prediction 0.907391787617813 Functional Gain - PDK3 ENSG00000067992;ENSG00000260822 intergenic Human other chrX:24562394 chrX:24562394 . . 0 21 hPsi_associated_SNPs_105442 0 0 1 0 0 exosome 0 0.438697174315567 0.962186217308044 0 hPsi_site_4402 iPseU_CNN:0.962186217308044;iRNA_PseU:0 4403 chrX 139866217 139866217 1 + G T LUAD 139866217 + 139866197 139866237 41 AAAAAATCCGGGTCTTCCAGGAAATCCGTGTCTTCCAGCAA AAAAAATCCGGGTCTTCCAGTAAATCCGTGTCTTCCAGCAA Direct Gain 0 0.953695562201081 0 0.986432015895844 prediction 0.907391124402161 Functional Gain - CDR1 ENSG00000184258 CDS Human protein_coding chrX:139866217 chrX:139866217 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105443 0 0 1 0 0 exosome 0 0.438745917438553 0.972864031791688 0 hPsi_site_4403 iPseU_CNN:0.972864031791688;iRNA_PseU:0 4404 chrX 105075071 105075071 1 + G T LUSC 105075071 + 105075051 105075091 41 CAACTGGAATATTCTCACTAGATAAAACCATTGGCCTTGGT CAACTGGAATATTCTCACTATATAAAACCATTGGCCTTGGT Direct Gain 0 0.95369502084105 0 0.995179653167725 prediction 0.9073900416821 Functional Gain - NRK ENSG00000123572 CDS Human protein_coding chrX:105075071 chrX:105075071 nonsynonymous SNV 0.993 2 21 hPsi_associated_SNPs_105444 0 0 0 0 2 exosome 0 0.430728834236297 0.99035930633545 0 hPsi_site_4404 iPseU_CNN:0.99035930633545;iRNA_PseU:0 4405 chr20 37555177 37555177 1 + C T BLCA 37555177 + 37555157 37555197 41 GACCGAGCTGTTCAGCGAGTCACGGCGCCTGGCTCTGGAGG GACCGAGCTGTTCAGCGAGTTACGGCGCCTGGCTCTGGAGG Direct Gain 0 0.953691490176352 0 0.999527394771576 prediction 0.907382980352704 Functional Gain - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37555177 chr20:37555177 nonsynonymous SNV 0.969 0 21 hPsi_associated_SNPs_105445 0 0 1 0 0 Ribosome 0 0.438434877309589 0.999054789543152 0 hPsi_site_4405 iPseU_CNN:0.999054789543152;iRNA_PseU:0 4406 chr12 54963097 54963097 1 + G A LAML 54963097 - 54963077 54963117 41 ACAATGCTTCGGAACTTGGGCTTCTCCTCTGCTCGGCGGCC ACAATGCTTCGGAACTTGGGTTTCTCCTCTGCTCGGCGGCC Direct Gain 0 0.95368998047803 0 0.999921560287476 prediction 0.90737996095606 Functional Gain - PDE1B ENSG00000123360 CDS Human protein_coding chr12:54963097 chr12:54963097 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105446 0 0 0 0 0 exosome 0 0.438718592994435 0.999843120574952 0 hPsi_site_4406 iPseU_CNN:0.999843120574952;iRNA_PseU:0 4407 chr13 53602986 53602986 1 + C T BLCA 53602986 + 53602966 53603006 41 GACAAGATGAGGCCCGGCCTCTCATTTCTCCTAGCCCTTCT GACAAGATGAGGCCCGGCCTTTCATTTCTCCTAGCCCTTCT Direct Gain 0 0.953685236650341 0 0.916974008083344 prediction 0.907370473300682 Functional Gain - OLFM4 ENSG00000102837 CDS Human protein_coding chr13:53602986 chr13:53602986 synonymous SNV . 0 21 hPsi_associated_SNPs_105447 0 0 0 0 0 exosome 0 0.438718590893455 0.833948016166688 0 hPsi_site_4407 iPseU_CNN:0.833948016166688;iRNA_PseU:0 4408 chr9 93347362 93347362 1 + G A rs111838575 93347362 - 93347342 93347382 41 ACCTGGACCAGGTATTGGGCCATCTTCTTGTAGCAGTTGTG ACCTGGACCAGGTATTGGGCTATCTTCTTGTAGCAGTTGTG Direct Gain 0 0.953684166863349 0 0.99999988079071 prediction 0.907368333726697 Functional Gain - LINC01501;DIRAS2 ENSG00000229613;ENSG00000165023 intergenic Human other chr9:93347362 chr9:93347362 . . 0 21 hPsi_associated_SNPs_105448 0 0 0 0 0 unknown 0 0.438784180263155 0.99999976158142 0 hPsi_site_4408 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4409 chr4 145573877 145573877 1 + G T STAD 145573877 + 145573857 145573897 41 AGAGAGAAGTCTTGGAAAGAGACCTAGTACTTCCTCTGCTC AGAGAGAAGTCTTGGAAAGATACCTAGTACTTCCTCTGCTC Direct Gain 0 0.953683681896045 0 0.988217115402222 prediction 0.907367363792091 Functional Gain - HHIP ENSG00000164161 CDS Human protein_coding chr4:145573877 chr4:145573877 nonsynonymous SNV 0.992 2 21 hPsi_associated_SNPs_105449 0 0 0 0 1 cytosol 0 0.438715655497333 0.976434230804444 0 hPsi_site_4409 iPseU_CNN:0.976434230804444;iRNA_PseU:0 4410 chr16 2812292 2812292 1 + C T UCEC 2812292 + 2812272 2812312 41 GGGCAGGTCCCGCTCTAGAACACCTGCCAGGCGGAGATCAC GGGCAGGTCCCGCTCTAGAATACCTGCCAGGCGGAGATCAC Direct Gain 0 0.953671618215412 0 0.99847412109375 prediction 0.907343236430824 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812292 chr16:2812292 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_105450 0 0 1 0 0 Nucleus 0 0.4387185922458 0.9969482421875 0 hPsi_site_4410 iPseU_CNN:0.9969482421875;iRNA_PseU:0 4411 chr19 13050438 13050438 1 + C T LUAD 13050438 + 13050418 13050458 41 GGAGACTCAGAATACAACATCATGTTTGGTGAGGGCCTGCT GGAGACTCAGAATACAACATTATGTTTGGTGAGGGCCTGCT Direct Gain 0 0.953668735697719 0 0.0728958547115326 prediction 0.907337471395437 Functional Gain - CALR ENSG00000179218 CDS Human protein_coding chr19:13050438 chr19:13050438 synonymous SNV . 0 21 hPsi_associated_SNPs_105451 0 0 1 0 1 Ribosome 0 0.438733818427882 0 0 hPsi_site_4411 iPseU_CNN:0;iRNA_PseU:0 4412 chr1 47505192 47505192 1 + C T SKCM 47505192 + 47505172 47505212 41 GGGCATCCTGGGGGATGGGTCTTCTATCACTTGGTAAGATC GGGCATCCTGGGGGATGGGTTTTCTATCACTTGGTAAGATC Direct Gain 0 0.953662546869201 0 0.0697433650493622 prediction 0.907325093738403 Functional Gain - CYP4X1 ENSG00000186377 CDS Human protein_coding chr1:47505192 chr1:47505192 nonsynonymous SNV 0.093 1 21 hPsi_associated_SNPs_105452 0 0 0 0 1 Ribosome 0 0.438718654256567 0 0 hPsi_site_4412 iPseU_CNN:0;iRNA_PseU:0 4413 chr7 100086204 100086204 1 + C A LUAD 100086204 - 100086184 100086224 41 CGTGAGGCTGTTGTGGCGGGGATGTTGCCGTCAATGGTGGA CGTGAGGCTGTTGTGGCGGGTATGTTGCCGTCAATGGTGGA Direct Gain 0 0.953657619410182 0 0.894466280937195 prediction 0.907315238820364 Functional Gain - NYAP1 ENSG00000166924 CDS Human protein_coding chr7:100086204 chr7:100086204 nonsynonymous SNV 0.047 3 21 hPsi_associated_SNPs_105453 0 0 0 0 0 nucleolus 0 0.438718088272131 0.78893256187439 0 hPsi_site_4413 iPseU_CNN:0.78893256187439;iRNA_PseU:0 4414 chr22 38051611 38051611 1 + G A LUAD 38051611 - 38051591 38051631 41 GGGGACCCCACTGATAGCCTCAGGGGCTCCTCCCTCTGCTG GGGGACCCCACTGATAGCCTTAGGGGCTCCTCCCTCTGCTG Direct Gain 0 0.953644214661557 0 0.799445033073425 prediction 0.907288429323114 Functional Gain - SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38051611 chr22:38051611 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_105454 0 0 0 0 0 cytosol 0 0.438718575415065 0.59889006614685 0 hPsi_site_4414 iPseU_CNN:0.59889006614685;iRNA_PseU:0 4415 chr17 73055613 73055613 1 + G A BLCA 73055613 - 73055593 73055633 41 AGGACTCTGTACACGTGCTTCACGGGGCCCTGCAATGACCA AGGACTCTGTACACGTGCTTTACGGGGCCCTGCAATGACCA Direct Gain 0 0.953637373657533 0 0.999706149101257 prediction 0.907274747315066 Functional Gain - KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73055613 chr17:73055613 synonymous SNV . 0 21 hPsi_associated_SNPs_105455 0 0 0 0 0 Cytosol 0 0.43912250845848 0.999412298202514 0 hPsi_site_4415 iPseU_CNN:0.999412298202514;iRNA_PseU:0 4416 chr5 140249949 140249949 1 + G A SKCM 140249949 - 140249929 140249969 41 CCGCGCAGTCACCACCAGTTCATAGGCCCACACGTTCTCGC CCGCGCAGTCACCACCAGTTTATAGGCCCACACGTTCTCGC Direct Gain 0 0.953636876371864 0 0.99927282333374 prediction 0.907273752743728 Functional Gain - PCDHA11 ENSG00000249158 CDS Human protein_coding chr5:140249949 chr5:140249949 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_105456 0 0 0 0 0 exosome 0 0.438761867658749 0.99854564666748 0 hPsi_site_4416 iPseU_CNN:0.99854564666748;iRNA_PseU:0 4417 chr5 140712369 140712369 1 + C T SKCM 140712369 + 140712349 140712389 41 GTCTCCTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGC GTCTCCTGCGTCTTCCTGGCTTTCGTCATCGTGCTGCTGGC Direct Gain 0 0.953634220142407 0 0.942176342010498 prediction 0.907268440284815 Functional Gain - PCDHGA1 ENSG00000204956 CDS Human protein_coding chr5:140712369 chr5:140712369 synonymous SNV . 0 21 hPsi_associated_SNPs_105457 0 0 0 0 0 exosome 0 0.438734985798579 0.884352684020996 0 hPsi_site_4417 iPseU_CNN:0.884352684020996;iRNA_PseU:0 4418 chr7 143175367 143175367 1 + G T ACC 143175367 + 143175347 143175387 41 GGGTGGGTGCCCTGGCTCCTGTTGGGCTCTGTCCTGATCTC GGGTGGGTGCCCTGGCTCCTTTTGGGCTCTGTCCTGATCTC Direct Gain 0 0.953632536571808 0 0.415261030197144 prediction 0.907265073143615 Functional Gain - TAS2R41 ENSG00000221855 CDS Human protein_coding chr7:143175367 chr7:143175367 synonymous SNV . 0 21 hPsi_associated_SNPs_105458 0 0 0 0 0 exosome 0 0.438565557741607 0 0 hPsi_site_4418 iPseU_CNN:0;iRNA_PseU:0 4419 chr1 145473962 145473962 1 + G T LUAD 145473962 + 145473942 145473982 41 AGGAAGAAGAGGAGAAGCGGGACGTATTTGAATTCCCTCTT AGGAAGAAGAGGAGAAGCGGTACGTATTTGAATTCCCTCTT Direct Gain 0 0.953615006389064 0 0.999994039535522 prediction 0.907230012778129 Functional Gain - ANKRD34A ENSG00000181039 CDS Human other chr1:145473962 chr1:145473962 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105459 0 0 0 0 0 chromatin 0 0.43870567345001 0.999988079071044 0 hPsi_site_4419 iPseU_CNN:0.999988079071044;iRNA_PseU:0 4420 chr2 210837831 210837831 1 + G T UCEC 210837831 + 210837811 210837851 41 GAGGTGCAGCTGCTGCTGCAGACAGTCATCAATGTACTCCT GAGGTGCAGCTGCTGCTGCATACAGTCATCAATGTACTCCT Direct Gain 0 0.953612492145344 0 0.175249725580215 prediction 0.907224984290688 Functional Gain - UNC80 ENSG00000144406 CDS Human protein_coding chr2:210837831 chr2:210837831 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_105460 0 0 0 0 1 exosome 0 0.433909885149084 0 0 hPsi_site_4420 iPseU_CNN:0;iRNA_PseU:0 4421 chr12 56733273 56733273 1 + G A STAD 56733273 - 56733253 56733293 41 GAGTCCTTGGGGGTCACAGCCATCTCCACACTGGATATGGG GAGTCCTTGGGGGTCACAGCTATCTCCACACTGGATATGGG Direct Gain 0 0.953610705006738 0 0.999554395675659 prediction 0.907221410013475 Functional Gain - IL23A ENSG00000110944 CDS Human protein_coding chr12:56733273 chr12:56733273 nonsynonymous SNV 0.978 1 21 hPsi_associated_SNPs_105461 0 0 0 0 0 Cytosol 0 0.438292021573502 0.999108791351318 0 hPsi_site_4421 iPseU_CNN:0.999108791351318;iRNA_PseU:0 4422 chr20 24523848 24523848 1 + C T UCEC 24523848 + 24523828 24523868 41 TGGCCGAGAGCAGAGATGGTCTGGTGTCTGTTTACCCAGCG TGGCCGAGAGCAGAGATGGTTTGGTGTCTGTTTACCCAGCG Direct Gain 0 0.953609355490678 0 0.812302947044373 prediction 0.907218710981357 Functional Gain - SYNDIG1 ENSG00000101463 CDS Human protein_coding chr20:24523848 chr20:24523848 synonymous SNV . 0 21 hPsi_associated_SNPs_105462 0 0 0 0 0 exosome 0 0.439039092367873 0.624605894088746 0 hPsi_site_4422 iPseU_CNN:0.624605894088746;iRNA_PseU:0 4423 chr2 160027234 160027234 1 + C A COAD 160027234 - 160027214 160027254 41 AGGGCCACCAACTTGGAAATGATTGCCGTCTTCCCAAATCC AGGGCCACCAACTTGGAAATTATTGCCGTCTTCCCAAATCC Direct Gain 0 0.953607308065033 0 0.999947607517242 prediction 0.907214616130067 Functional Gain - TANC1 ENSG00000115183 CDS Human protein_coding chr2:160027234 chr2:160027234 synonymous SNV . 0 21 hPsi_associated_SNPs_105463 0 0 0 0 0 Nucleus 0 0.438709027686254 0.999895215034484 0 hPsi_site_4423 iPseU_CNN:0.999895215034484;iRNA_PseU:0 4424 chr9 131847848 131847848 1 + G A UCEC 131847848 - 131847828 131847868 41 GCGAGGAGTCCCAGGGAGAGCACGTGCCTCCACAGCAAGTC GCGAGGAGTCCCAGGGAGAGTACGTGCCTCCACAGCAAGTC Direct Gain 0 0.953590484165117 0 0.99726003408432 prediction 0.907180968330235 Functional Gain - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847848 chr9:131847848 synonymous SNV . 0 21 hPsi_associated_SNPs_105464 0 0 0 0 0 Ribosome 0 0.438718344553207 0.99452006816864 0 hPsi_site_4424 iPseU_CNN:0.99452006816864;iRNA_PseU:0 4425 chr17 76130018 76130018 1 + C T UCEC 76130018 + 76129998 76130038 41 AAGGTCTTCTCCTCATGGGACTTCTGCATCCGGGTGCAGGA AAGGTCTTCTCCTCATGGGATTTCTGCATCCGGGTGCAGGA Direct Gain 0 0.953588536139667 0 0.455286920070648 prediction 0.907177072279334 Functional Gain - TMC8 ENSG00000167895 CDS Human protein_coding chr17:76130018 chr17:76130018 synonymous SNV . 0 21 hPsi_associated_SNPs_105465 0 0 0 0 2 chromatin 0 0.438718592995102 0 0 hPsi_site_4425 iPseU_CNN:0;iRNA_PseU:0 4426 chr5 140188116 140188116 1 + G A SKCM 140188116 - 140188096 140188136 41 AACGCCGGAGCGTTGTCGTTCACATCAGCCACCTCCACAGA AACGCCGGAGCGTTGTCGTTTACATCAGCCACCTCCACAGA Direct Gain 0 0.953582585395303 0 0.997920870780945 prediction 0.907165170790607 Functional Gain - PCDHA4 ENSG00000204967 CDS Human protein_coding chr5:140188116 chr5:140188116 synonymous SNV . 0 21 hPsi_associated_SNPs_105466 0 0 0 0 0 insoluble cytoplasm 0 0.438706135649961 0.99584174156189 0 hPsi_site_4426 iPseU_CNN:0.99584174156189;iRNA_PseU:0 4427 chr15 41056393 41056393 1 + C T BLCA 41056393 + 41056373 41056413 41 TGCACCATGCCCTACCTGCTCATCAGCACCCAGATCCGCAT TGCACCATGCCCTACCTGCTTATCAGCACCCAGATCCGCAT Direct Gain 0 0.953578184919528 0 0.00691670179367065 prediction 0.907156369839057 Functional Gain - GCHFR ENSG00000137880 CDS Human protein_coding chr15:41056393 chr15:41056393 synonymous SNV . 0 21 hPsi_associated_SNPs_105467 0 0 1 0 1 Cytosol 0 0.438719071138271 0 0 hPsi_site_4427 iPseU_CNN:0;iRNA_PseU:0 4428 chr17 80192000 80192000 1 + G A rs8078916 80192000 - 80191980 80192020 41 ACTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCA ACTGAGGCCGGGCGCGGTGGTTCACGCCTGTAATCCCAGCA Direct Gain 0 0.953574265719355 0 0.998084306716919 prediction 0.90714853143871 Functional Gain - SLC16A3 ENSG00000141526 UTR5 Human protein_coding chr17:80192000 chr17:80192000 . . 0 21 hPsi_associated_SNPs_105468 0 0 0 0 0 Ribosome 0 0.438876991456849 0.996168613433838 0 hPsi_site_4428 iPseU_CNN:0.996168613433838;iRNA_PseU:0 4429 chr13 26343235 26343235 1 + G A BLCA 26343235 - 26343215 26343255 41 ATGGCGAGGGTGATGGCCTTCACCCGCTTCTTCACCACATC ATGGCGAGGGTGATGGCCTTTACCCGCTTCTTCACCACATC Direct Gain 0 0.953572411369903 0 0.347404807806015 prediction 0.907144822739805 Functional Gain - ATP8A2 ENSG00000132932 CDS Human protein_coding chr13:26343235 chr13:26343235 synonymous SNV . 0 21 hPsi_associated_SNPs_105469 0 0 0 0 0 unknown 0 0.438757143707029 0 0 hPsi_site_4429 iPseU_CNN:0;iRNA_PseU:0 4430 chr6 54095644 54095644 1 + C T UCEC 54095644 + 54095624 54095664 41 TTGCCCCAGGACCCTTCAGTCATCTGTCCTTCTCCTTGAGT TTGCCCCAGGACCCTTCAGTTATCTGTCCTTCTCCTTGAGT Direct Gain 0 0.953571574358814 0 0.969321370124817 prediction 0.907143148717628 Functional Gain - MLIP ENSG00000146147 CDS Human protein_coding chr6:54095644 chr6:54095644 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105470 0 0 0 0 1 Cytosol 0 0.438718401871119 0.938642740249634 0 hPsi_site_4430 iPseU_CNN:0.938642740249634;iRNA_PseU:0 4431 chr16 77232076 77232076 1 + G T LUSC 77232076 + 77232056 77232096 41 GCAGGTGCAATCTTGGTAGTGACCAAACTCCTGCGCTGGGT GCAGGTGCAATCTTGGTAGTTACCAAACTCCTGCGCTGGGT Direct Gain 0 0.953551883597962 0 0.999991238117218 prediction 0.907103767195923 Functional Gain - MON1B ENSG00000103111 CDS Human protein_coding chr16:77232076 chr16:77232076 synonymous SNV . 0 21 hPsi_associated_SNPs_105471 0 0 1 0 1 Ribosome 0 0.438746269650137 0.999982476234436 0 hPsi_site_4431 iPseU_CNN:0.999982476234436;iRNA_PseU:0 4432 chr14 22320911 22320911 1 + G A SKCM 22320911 - 22320891 22320931 41 ATGTGGATGTCAGGCTGGGTCACTGACTGGGCTCTGGCAGT ATGTGGATGTCAGGCTGGGTTACTGACTGGGCTCTGGCAGT Direct Gain 0 0.953537834345179 0 0.942885994911194 prediction 0.907075668690358 Functional Gain - OR4E1;LINC02332 ENSG00000211787 CDS Human TR_V_gene chr14:22320911 chr14:22320911 synonymous SNV . 0 21 hPsi_associated_SNPs_105472 0 0 0 0 0 unknown 0 0.438795617958457 0.885771989822388 0 hPsi_site_4432 iPseU_CNN:0.885771989822388;iRNA_PseU:0 4433 chr16 2027165 2027165 1 + C T SKCM 2027165 + 2027145 2027185 41 TGCCAGCTGCTGGGTGTCTTCTCAGGCCACCGGCGTGGCCT TGCCAGCTGCTGGGTGTCTTTTCAGGCCACCGGCGTGGCCT Direct Gain 0 0.953533321441483 0 0.998901605606079 prediction 0.907066642882966 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2027165 chr16:2027165 synonymous SNV . 0 21 hPsi_associated_SNPs_105473 0 0 1 0 0 Nucleus 0 0.438717888039935 0.997803211212158 0 hPsi_site_4433 iPseU_CNN:0.997803211212158;iRNA_PseU:0 4434 chr4 184114852 184114852 1 + C A UCEC 184114852 - 184114832 184114872 41 GGAAAACTTACTGTTGATGTGATCGATGTAGTAGACACCAA GGAAAACTTACTGTTGATGTTATCGATGTAGTAGACACCAA Direct Gain 0 0.953528599913456 0 0.999583899974823 prediction 0.907057199826911 Functional Gain - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184114852 chr4:184114852 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105474 0 0 0 0 0 Cytosol 0 0.438731979699815 0.999167799949646 0 hPsi_site_4434 iPseU_CNN:0.999167799949646;iRNA_PseU:0 4435 chr16 4638218 4638218 1 + G T UCEC 4638218 + 4638198 4638238 41 GCAAGCCGCGTTGACCTGGAGACTGTGGCCTTGGAGCTGAA GCAAGCCGCGTTGACCTGGATACTGTGGCCTTGGAGCTGAA Direct Gain 0 0.953526716262662 0 0.417697668075562 prediction 0.907053432525325 Functional Gain - C16orf96 ENSG00000205832 CDS Human protein_coding chr16:4638218 chr16:4638218 nonsynonymous SNV 0.503 0 21 hPsi_associated_SNPs_105475 0 0 0 0 1 exosome 0 0.439227100255613 0 0 hPsi_site_4435 iPseU_CNN:0;iRNA_PseU:0 4436 chr6 130392265 130392265 1 + G A UCS 130392265 - 130392245 130392285 41 GAAAATGTCTCACCAATAGTCATAGCTCTCATCCCAGTTGT GAAAATGTCTCACCAATAGTTATAGCTCTCATCCCAGTTGT Direct Gain 0 0.953522786785372 0 0.827084600925446 prediction 0.907045573570744 Functional Gain - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130392265 chr6:130392265 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105476 0 0 0 0 0 nucleoplasm 0 0.438718593007889 0.654169201850892 0 hPsi_site_4436 iPseU_CNN:0.654169201850892;iRNA_PseU:0 4437 chr1 220307795 220307795 1 + G T LUAD 220307795 + 220307775 220307815 41 AGGAAAAGACCAGCTCGGGGGTTGGTTTCAGTCATCCTTAT AGGAAAAGACCAGCTCGGGGTTTGGTTTCAGTCATCCTTAT Direct Gain 0 0.953519182534898 0 0.386149823665619 prediction 0.907038365069795 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220307795 chr1:220307795 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_105477 0 0 1 0 2 Ribosome 0 0.438718297357126 0 0 hPsi_site_4437 iPseU_CNN:0;iRNA_PseU:0 4438 chr19 10157997 10157997 1 + C A UCEC 10157997 - 10157977 10158017 41 AAAGGGGTCCGAGACACAGAGACCTACAGCCAGGAGAGCAC AAAGGGGTCCGAGACACAGATACCTACAGCCAGGAGAGCAC Direct Gain 0 0.953515085151101 0 0.967584729194641 prediction 0.907030170302201 Functional Gain - C3P1 ENSG00000167798 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:10157997 chr19:10157997 . . 0 21 hPsi_associated_SNPs_105478 0 0 0 0 0 unknown 0 0.438723318420547 0.935169458389282 0 hPsi_site_4438 iPseU_CNN:0.935169458389282;iRNA_PseU:0 4439 chr4 7725486 7725486 1 + G A OV 7725486 - 7725466 7725506 41 TCCCCGGTCAGTGTAAGGTTCACGTACATGGCCTTGAAGCC TCCCCGGTCAGTGTAAGGTTTACGTACATGGCCTTGAAGCC Direct Gain 0 0.953513199893824 0 0.998184025287628 prediction 0.907026399787649 Functional Gain - SORCS2 ENSG00000184985 CDS Human protein_coding chr4:7725486 chr4:7725486 synonymous SNV . 0 21 hPsi_associated_SNPs_105479 0 0 0 0 0 nucleus 0 0.438537579824857 0.996368050575256 0 hPsi_site_4439 iPseU_CNN:0.996368050575256;iRNA_PseU:0 4440 chr8 22021462 22021462 1 + G A LUAD 22021462 - 22021442 22021482 41 GGAGGGTGCTGAGCCTGCATCTCGCCCCTCTGCCTGGCCCA GGAGGGTGCTGAGCCTGCATTTCGCCCCTCTGCCTGGCCCA Direct Gain 0 0.953513167660516 0 0.979511499404907 prediction 0.907026335321033 Functional Gain - SFTPC ENSG00000168484 CDS Human protein_coding chr8:22021462 chr8:22021462 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_105480 0 0 0 0 0 Cytosol 0 0.439390251327282 0.959022998809814 0 hPsi_site_4440 iPseU_CNN:0.959022998809814;iRNA_PseU:0 4441 chr8 59329436 59329436 1 + G A BLCA 59329436 - 59329416 59329456 41 GGAAGATTTGCACTTCACTTCATCTTCATACAATTCTGCCA GGAAGATTTGCACTTCACTTTATCTTCATACAATTCTGCCA Direct Gain 0 0.95350992687981 0 0.709709405899048 prediction 0.907019853759621 Functional Gain - UBXN2B ENSG00000215114 CDS Human protein_coding chr8:59329436 chr8:59329436 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_105481 0 0 0 0 0 Cytosol 0 0.438717898925591 0.419418811798096 0 hPsi_site_4441 iPseU_CNN:0.419418811798096;iRNA_PseU:0 4442 chr15 85326889 85326889 1 + C A LUAD 85326889 - 85326869 85326909 41 GGCTCCGGGGACTCTTTGGTGACTTGGGCATTTTGGGGCTA GGCTCCGGGGACTCTTTGGTTACTTGGGCATTTTGGGGCTA Direct Gain 0 0.953508593129766 0 0.999988436698914 prediction 0.907017186259532 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326889 chr15:85326889 stopgain 1.000 1 21 hPsi_associated_SNPs_105482 0 0 0 0 0 Cytosol 0 0.438718118097719 0.999976873397828 0 hPsi_site_4442 iPseU_CNN:0.999976873397828;iRNA_PseU:0 4443 chr9 34501173 34501173 1 + G A SKCM 34501173 - 34501153 34501193 41 GTCAGATCACTTACAAGAGCCATATCCCACTGCAAACAGAT GTCAGATCACTTACAAGAGCTATATCCCACTGCAAACAGAT Direct Gain 0 0.953507056734096 0 0.999653100967407 prediction 0.907014113468193 Functional Gain - DNAI1 ENSG00000122735 CDS Human protein_coding chr9:34501173 chr9:34501173 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_105483 0 0 0 0 0 unknown 0 0.438768127409391 0.999306201934814 0 hPsi_site_4443 iPseU_CNN:0.999306201934814;iRNA_PseU:0 4444 chr10 118368610 118368610 1 + C T LUAD 118368610 + 118368590 118368630 41 GTGCGGGAAGACACGCTGCTCACCCTCACGCCCTGCTAAGC GTGCGGGAAGACACGCTGCTTACCCTCACGCCCTGCTAAGC Direct Gain 0 0.953504641227469 0 0.00072130560874939 prediction 0.907009282454939 Functional Gain - PNLIPRP1 ENSG00000187021 CDS Human protein_coding chr10:118368610 chr10:118368610 synonymous SNV . 0 21 hPsi_associated_SNPs_105484 0 0 0 0 1 unknown 0 0.438718594781542 0 0 hPsi_site_4444 iPseU_CNN:0;iRNA_PseU:0 4445 chr20 55027795 55027795 1 + G T LGG 55027795 + 55027775 55027815 41 AGAATTCGGGACCAGATGCAGACCATCTCCAACTCCTACCG AGAATTCGGGACCAGATGCATACCATCTCCAACTCCTACCG Direct Gain 0 0.953503883089819 0 0.980225026607513 prediction 0.907007766179638 Functional Gain - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55027795 chr20:55027795 nonsynonymous SNV 0.906 3 21 hPsi_associated_SNPs_105485 0 0 1 0 0 chromatin 0 0.437613749512296 0.960450053215026 0 hPsi_site_4445 iPseU_CNN:0.960450053215026;iRNA_PseU:0 4446 chr2 185800745 185800745 1 + C A LUAD 185800745 - 185800725 185800765 41 AAAGCCGATTTTGTGTCTGTGAATCCCCTGGGCTTGATCCC AAAGCCGATTTTGTGTCTGTTAATCCCCTGGGCTTGATCCC Direct Gain 0 0.953502444839915 0 0.592442691326141 prediction 0.907004889679831 Functional Gain - ZNF804A ENSG00000170396 CDS Human protein_coding chr2:185800745 chr2:185800745 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_105486 0 0 0 0 0 nucleoplasm 0 0.4387185929951 0.184885382652282 0 hPsi_site_4446 iPseU_CNN:0.184885382652282;iRNA_PseU:0 4447 chr6 129635828 129635828 1 + G T UCEC 129635828 + 129635808 129635848 41 GGAAGGCATCCACTGTGACAGATGCCGGCCTGGCAAATTCG GGAAGGCATCCACTGTGACATATGCCGGCCTGGCAAATTCG Direct Gain 0 0.953502159906328 0 0.3857581615448 prediction 0.907004319812657 Functional Gain - LAMA2 ENSG00000196569 CDS Human protein_coding chr6:129635828 chr6:129635828 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_105487 0 0 0 0 1 cytosol 0 0.438718446172941 0 0 hPsi_site_4447 iPseU_CNN:0;iRNA_PseU:0 4448 chr9 32433803 32433803 1 + C A rs61752944 32433803 - 32433783 32433823 41 TCAAAGAATGGTGGTGATTTGATATACGTAGATTTGGAATT TCAAAGAATGGTGGTGATTTTATATACGTAGATTTGGAATT Direct Gain 0 0.953489870063932 0 0.134118288755417 prediction 0.906979740127864 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32433803 chr9:32433803 synonymous SNV . 0 21 hPsi_associated_SNPs_105488 0 0 0 0 0 Ribosome 0 0.438717570393231 0 0 hPsi_site_4448 iPseU_CNN:0;iRNA_PseU:0 4449 chr4 156638432 156638432 1 + C A COAD 156638432 - 156638412 156638452 41 TGATAGGTTCTCCATGGGGAGACATAACTTCATCAGAGAGC TGATAGGTTCTCCATGGGGATACATAACTTCATCAGAGAGC Direct Gain 0 0.953486333443361 0 0.975366711616516 prediction 0.906972666886721 Functional Gain - GUCY1A3 ENSG00000164116 CDS Human protein_coding chr4:156638432 chr4:156638432 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105489 0 0 0 0 0 exosome 0 0.437397836638397 0.950733423233032 0 hPsi_site_4449 iPseU_CNN:0.950733423233032;iRNA_PseU:0 4450 chr6 28054062 28054062 1 + C T SKCM 28054062 + 28054042 28054082 41 CAAGGCCCATTTTGATTCATCAGAACCCCAGCTCCTATGGG CAAGGCCCATTTTGATTCATTAGAACCCCAGCTCCTATGGG Direct Gain 0 0.953483926166392 0 0.997851848602295 prediction 0.906967852332785 Functional Gain - ZNF165 ENSG00000197279 CDS Human protein_coding chr6:28054062 chr6:28054062 nonsynonymous SNV 0.154 0 21 hPsi_associated_SNPs_105490 0 0 0 0 1 Endoplasmic reticulum 0 0.438718592995102 0.99570369720459 0 hPsi_site_4450 iPseU_CNN:0.99570369720459;iRNA_PseU:0 4451 chrX 66863138 66863138 1 + T A LIHC 66863138 - 66863118 66863158 41 GGTCTTCTGGGGTGGAAAGTAATAGTCAATGGGCAAAACAT GGTCTTCTGGGGTGGAAAGTTATAGTCAATGGGCAAAACAT Direct Gain 0 0.953482082846492 0 0.893150329589844 prediction 0.906964165692985 Functional Gain - AR ENSG00000169083 CDS Human protein_coding chrX:66863138 chrX:66863138 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105491 0 0 0 0 0 Endoplasmic reticulum 0 0.438718875644351 0.786300659179688 0 hPsi_site_4451 iPseU_CNN:0.786300659179688;iRNA_PseU:0 4452 chr2 64780376 64780376 1 + G A rs139549105 64780376 - 64780356 64780396 41 AGATTCAGTAGCCTGCTGGTCTCCAAAAGCAGCCCAAGAAC AGATTCAGTAGCCTGCTGGTTTCCAAAAGCAGCCCAAGAAC Direct Gain 0 0.953478066855556 0 0.777835965156555 prediction 0.906956133711111 Functional Gain - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64780376 chr2:64780376 nonsynonymous SNV 0.982 3 21 hPsi_associated_SNPs_105492 0 0 0 0 0 Ribosome 0 0.438718550491435 0.55567193031311 0 hPsi_site_4452 iPseU_CNN:0.55567193031311;iRNA_PseU:0 4453 chr19 8430919 8430919 1 + C T UCEC 8430919 + 8430899 8430939 41 AGCGGCACCTGGAGAAGCAGCACCTGCGAATTCAGCATCTG AGCGGCACCTGGAGAAGCAGTACCTGCGAATTCAGCATCTG Direct Gain 0 0.953475518036382 0 0.993364930152893 prediction 0.906951036072764 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8430919 chr19:8430919 nonsynonymous SNV 0.483 1 21 hPsi_associated_SNPs_105493 0 0 0 0 2 Cytosol 0 0.438717909736848 0.986729860305786 0 hPsi_site_4453 iPseU_CNN:0.986729860305786;iRNA_PseU:0 4454 chr1 152800159 152800159 1 + C T SKCM 152800159 + 152800139 152800179 41 GAGGTGGCTGCTGCCTGAGCCACCACAGGCGCCACAGGTCC GAGGTGGCTGCTGCCTGAGCTACCACAGGCGCCACAGGTCC Direct Gain 0 0.953474287456289 0 0.999156475067139 prediction 0.906948574912579 Functional Gain - LCE1A ENSG00000186844 CDS Human protein_coding chr1:152800159 chr1:152800159 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_105494 0 0 0 0 0 unknown 0 0.438753909857038 0.998312950134278 0 hPsi_site_4454 iPseU_CNN:0.998312950134278;iRNA_PseU:0 4455 chr17 45369870 45369870 1 + C A COAD 45369870 - 45369850 45369890 41 CACTCGCAGTACTTGCCCGTGATCTTGCCAAAGTCACTGCT CACTCGCAGTACTTGCCCGTTATCTTGCCAAAGTCACTGCT Direct Gain 0 0.953471687171227 0 0.99965763092041 prediction 0.906943374342454 Functional Gain - ITGB3 ENSG00000259207;ENSG00000259753 CDS Human other chr17:45369870 chr17:45369870 synonymous SNV . 0 21 hPsi_associated_SNPs_105495 0 0 0 0 0 cytosol 0 0.438719496186192 0.99931526184082 0 hPsi_site_4455 iPseU_CNN:0.99931526184082;iRNA_PseU:0 4456 chr8 87437474 87437474 1 + C T SKCM 87437474 + 87437454 87437494 41 GGGAACAAAGAAAAGATCCTCATGGTAGAACCTATTATGTG GGGAACAAAGAAAAGATCCTTATGGTAGAACCTATTATGTG Direct Gain 0 0.953466643680262 0 0.952111303806305 prediction 0.906933287360524 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87437474 chr8:87437474 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105496 0 0 1 0 1 Cytosol 0 0.438718433189889 0.90422260761261 0 hPsi_site_4456 iPseU_CNN:0.90422260761261;iRNA_PseU:0 4457 chr7 100678935 100678935 1 + C T KIRC 100678935 + 100678915 100678955 41 GCCGGTAGTCAGTTCTGAGGCTAGCACCCTTTCAGCAACTC GCCGGTAGTCAGTTCTGAGGTTAGCACCCTTTCAGCAACTC Direct Gain 0 0.953466186076064 0 0.748134672641754 prediction 0.906932372152128 Functional Gain - MUC17 ENSG00000169876 CDS Human protein_coding chr7:100678935 chr7:100678935 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_105497 0 0 0 0 0 exosome 0 0.43871830699929 0.496269345283508 0 hPsi_site_4457 iPseU_CNN:0.496269345283508;iRNA_PseU:0 4458 chr17 57774031 57774031 1 + C T rs541710398 57774031 + 57774011 57774051 41 AGATCAAAAGGGAAAAAAGGCACCCTTAATTGTCAAAGTTA AGATCAAAAGGGAAAAAAGGTACCCTTAATTGTCAAAGTTA Direct Gain 0 0.953463814331662 0 0.995759844779968 prediction 0.906927628663324 Functional Gain - CLTC ENSG00000141367;ENSG00000141378 downstream Human other chr17:57774031 chr17:57774031 . . 0 21 hPsi_associated_SNPs_105498 0 0 0 0 0 Nucleus 0 0.438718592589115 0.991519689559936 0 hPsi_site_4458 iPseU_CNN:0.991519689559936;iRNA_PseU:0 4459 chr15 93522446 93522446 1 + C T BLCA 93522446 + 93522426 93522466 41 AAAAGAAGATGGTATTAGATCATCTGGTGATTCAGCGCATG AAAAGAAGATGGTATTAGATTATCTGGTGATTCAGCGCATG Direct Gain 0 0.953463355548688 0 0.30159467458725 prediction 0.906926711097377 Functional Gain - CHD2 ENSG00000173575 CDS Human protein_coding chr15:93522446 chr15:93522446 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105499 0 0 1 1 1 Nucleus 0 0.438716664071461 0 0 hPsi_site_4459 iPseU_CNN:0;iRNA_PseU:0 4460 chr2 80136875 80136875 1 + C A LUSC 80136875 - 80136855 80136895 41 TGGAGCGCCTGCCGCACGGCGTTGCACTCCGCCACGATCCT TGGAGCGCCTGCCGCACGGCTTTGCACTCCGCCACGATCCT Direct Gain 0 0.953435429221804 0 0.999995768070221 prediction 0.906870858443608 Functional Gain - CTNNA2 ENSG00000066032 CDS Human protein_coding chr2:80136875 chr2:80136875 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_105500 0 0 0 0 0 nucleoplasm 0 0.438308242093079 0.999991536140442 0 hPsi_site_4460 iPseU_CNN:0.999991536140442;iRNA_PseU:0 4461 chr8 110471843 110471843 1 + G A LUSC 110471843 - 110471823 110471863 41 AGATGCAATGGTCATTTTTTCATTCTCTCCTTGACTGTGTC AGATGCAATGGTCATTTTTTTATTCTCTCCTTGACTGTGTC Direct Gain 0 0.953432911213227 0 0.0603932440280914 prediction 0.906865822426455 Functional Gain - PKHD1L1 ENSG00000205038 CDS Human protein_coding chr8:110471843 chr8:110471843 nonsynonymous SNV 0.905 5 21 hPsi_associated_SNPs_105501 0 0 0 0 0 exosome 0 0.441177899920456 0 0 hPsi_site_4461 iPseU_CNN:0;iRNA_PseU:0 4462 chr11 5510494 5510494 1 + C T STAD 5510494 + 5510474 5510514 41 ACATACTGTGAGCATATGGGCATTGCCCGACTGGCCTGTGC ACATACTGTGAGCATATGGGTATTGCCCGACTGGCCTGTGC Direct Gain 0 0.953430587717622 0 0.948591113090515 prediction 0.906861175435244 Functional Gain - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510494 chr11:5510494 synonymous SNV . 0 21 hPsi_associated_SNPs_105502 0 0 0 0 0 chromatin 0 0.438719819340829 0.89718222618103 0 hPsi_site_4462 iPseU_CNN:0.89718222618103;iRNA_PseU:0 4463 chr15 57731164 57731164 1 + G A PAAD 57731164 - 57731144 57731184 41 ATGACGATTGACGTTGTCGGCATGGATGGCACATTCCTGAT ATGACGATTGACGTTGTCGGTATGGATGGCACATTCCTGAT Direct Gain 0 0.953429204683256 0 0.927927494049072 prediction 0.906858409366513 Functional Gain - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57731164 chr15:57731164 nonsynonymous SNV 0.974 3 21 hPsi_associated_SNPs_105503 0 0 0 0 0 cytosol 0 0.438718566005243 0.855854988098144 0 hPsi_site_4463 iPseU_CNN:0.855854988098144;iRNA_PseU:0 4464 chr19 58967106 58967106 1 + G A rs143385944 58967106 - 58967086 58967126 41 AGGTCGGAGCTCTTCACGAACACTTTGCTGCACGCCCTGCA AGGTCGGAGCTCTTCACGAATACTTTGCTGCACGCCCTGCA Direct Gain 0 0.953427261834365 0 0.999993860721588 prediction 0.90685452366873 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58967106 chr19:58967106 synonymous SNV . 0 21 hPsi_associated_SNPs_105504 0 0 0 0 0 exosome 0 0.438793947317792 0.999987721443176 0 hPsi_site_4464 iPseU_CNN:0.999987721443176;iRNA_PseU:0 4465 chr11 65271612 65271612 1 + C A CESC 65271612 - 65271592 65271632 41 TGAATGGCTTCATGAAGGATGAAATGCCTCTGCAAAGGAAA TGAATGGCTTCATGAAGGATTAAATGCCTCTGCAAAGGAAA Direct Gain 0 0.953423657909238 0 0.999634265899658 prediction 0.906847315818476 Functional Gain - MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271612 chr11:65271612 . . 0 21 hPsi_associated_SNPs_105505 0 0 0 0 0 unknown 0 0.438720411759887 0.999268531799316 0 hPsi_site_4465 iPseU_CNN:0.999268531799316;iRNA_PseU:0 4466 chr7 138984576 138984576 1 + G A rs191077816 138984576 - 138984556 138984596 41 GAAGCAAAGACCTTTTTATTCATATTTCGTAAAAGCAAGAG GAAGCAAAGACCTTTTTATTTATATTTCGTAAAAGCAAGAG Direct Gain 0 0.953419136317839 0 0.432264775037766 prediction 0.906838272635678 Functional Gain - UBN2 ENSG00000157741 UTR3 Human protein_coding chr7:138984576 chr7:138984576 . . 0 21 hPsi_associated_SNPs_105506 0 0 0 0 0 Cytosol 0 0.43871575274061 0 0 hPsi_site_4466 iPseU_CNN:0;iRNA_PseU:0 4467 chr12 53499791 53499791 1 + G A SKCM 53499791 - 53499771 53499811 41 GAAGGGGACCTACCTGCCCTCATCAATGAAGTCGATGGCCA GAAGGGGACCTACCTGCCCTTATCAATGAAGTCGATGGCCA Direct Gain 0 0.953415269200262 0 0.999976813793182 prediction 0.906830538400525 Functional Gain - SOAT2 ENSG00000167780 CDS Human protein_coding chr12:53499791 chr12:53499791 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105507 0 0 0 0 0 cytosol 0 0.438718592969645 0.999953627586364 0 hPsi_site_4467 iPseU_CNN:0.999953627586364;iRNA_PseU:0 4468 chr5 140772607 140772607 1 + C T SKCM 140772607 + 140772587 140772627 41 AGGTAGGACGCAGCTCTTTGCTCTGAACCCGCGCAGCGGCA AGGTAGGACGCAGCTCTTTGTTCTGAACCCGCGCAGCGGCA Direct Gain 0 0.953415155155423 0 0.982816219329834 prediction 0.906830310310846 Functional Gain - PCDHGA8 ENSG00000253767 CDS Human protein_coding chr5:140772607 chr5:140772607 nonsynonymous SNV 0.787 1 21 hPsi_associated_SNPs_105508 0 0 0 0 0 exosome 0 0.438678192292485 0.965632438659668 0 hPsi_site_4468 iPseU_CNN:0.965632438659668;iRNA_PseU:0 4469 chr1 23695852 23695852 1 + G T UCEC 23695852 + 23695832 23695872 41 ACCCGAGTGGGGGACGAACAGACTTACCTCCTGTCCCGCAA ACCCGAGTGGGGGACGAACATACTTACCTCCTGTCCCGCAA Direct Gain 0 0.95341389666986 0 0.999994516372681 prediction 0.90682779333972 Functional Gain - ZNF436-AS1 ENSG00000249087 CDS Human antisense chr1:23695852 chr1:23695852 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105509 0 0 1 0 0 unknown 0 0.438416315706265 0.999989032745362 0 hPsi_site_4469 iPseU_CNN:0.999989032745362;iRNA_PseU:0 4470 chr17 37187142 37187142 1 + T A rs116663797 37187142 - 37187122 37187162 41 GTGACACTGGGTGATACTGGAATCTGGGCTTGGTCCTGGCC GTGACACTGGGTGATACTGGTATCTGGGCTTGGTCCTGGCC Direct Gain 0 0.953390684782048 0 0.999999701976776 prediction 0.906781369564096 Functional Gain - LRRC37A11P ENSG00000214553 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:37187142 chr17:37187142 . . 0 21 hPsi_associated_SNPs_105510 0 0 0 0 0 unknown 0 0.438718592764264 0.999999403953552 0 hPsi_site_4470 iPseU_CNN:0.999999403953552;iRNA_PseU:0 4471 chr11 70224261 70224261 1 + G A PAAD 70224261 - 70224241 70224281 41 GGCTGCATAGAGGGGGAAGACATAGAAGAAGTCACCCGGAA GGCTGCATAGAGGGGGAAGATATAGAAGAAGTCACCCGGAA Direct Gain 0 0.953386239010884 0 0.945703089237213 prediction 0.906772478021767 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70224261 chr11:70224261 nonsynonymous SNV 0.111 0 21 hPsi_associated_SNPs_105511 0 0 0 0 0 Ribosome 0 0.438718592995358 0.891406178474426 0 hPsi_site_4471 iPseU_CNN:0.891406178474426;iRNA_PseU:0 4472 chr19 36980861 36980861 1 + C T rs142207550 36980861 + 36980841 36980881 41 CGGTTGGACCCTCCGAAAGTCATCTTAATTGCTCTCACAGA CGGTTGGACCCTCCGAAAGTTATCTTAATTGCTCTCACAGA Direct Gain 0 0.953385146568896 0 0.999028503894806 prediction 0.906770293137793 Functional Gain - LOC728752 ENSG00000267309 ncRNA_exonic Human antisense chr19:36980861 chr19:36980861 . . 0 21 hPsi_associated_SNPs_105512 0 0 0 0 0 unknown 0 0.438718593135109 0.998057007789612 0 hPsi_site_4472 iPseU_CNN:0.998057007789612;iRNA_PseU:0 4473 chr6 38890846 38890846 1 + G T ACC 38890846 + 38890826 38890866 41 GGCTGCAGGATTTGCTTAATGACGCTGATACGTGCCGGAAA GGCTGCAGGATTTGCTTAATTACGCTGATACGTGCCGGAAA Direct Gain 0 0.953373242033465 0 0.989360928535461 prediction 0.906746484066931 Functional Gain - DNAH8 ENSG00000124721 CDS Human protein_coding chr6:38890846 chr6:38890846 nonsynonymous SNV 0.752 4 21 hPsi_associated_SNPs_105513 0 0 0 0 1 chromatin 0 0.438688697996366 0.978721857070922 0 hPsi_site_4473 iPseU_CNN:0.978721857070922;iRNA_PseU:0 4474 chr11 111796690 111796690 1 + G A CESC 111796690 - 111796670 111796710 41 ATACGTATGTCCTGTTGTTTCATGGCCCTGCGAGGAATGGA ATACGTATGTCCTGTTGTTTTATGGCCCTGCGAGGAATGGA Direct Gain 0 0.953371025734491 0 0.815878808498383 prediction 0.906742051468983 Functional Gain - C11orf52 ENSG00000149300 CDS Human protein_coding chr11:111796690 chr11:111796690 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_105514 0 0 0 0 0 exosome 0 0.438731197907179 0.631757616996766 0 hPsi_site_4474 iPseU_CNN:0.631757616996766;iRNA_PseU:0 4475 chr1 35855617 35855617 1 + G A LIHC 35855617 - 35855597 35855637 41 AGCAGGTTACAGAAATGTTTCATTTCCCCTCGCCATTTCAA AGCAGGTTACAGAAATGTTTTATTTCCCCTCGCCATTTCAA Direct Gain 0 0.953366866018181 0 0.198571711778641 prediction 0.906733732036362 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35855617 chr1:35855617 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_105515 0 0 0 0 0 Cytosol 0 0.438718592995101 0 0 hPsi_site_4475 iPseU_CNN:0;iRNA_PseU:0 4476 chr2 71780216 71780216 1 + G A COAD 71780216 - 71780196 71780236 41 GCTGACCTCAAACTGGATGGCATCATCCACATCCTGCAGCA GCTGACCTCAAACTGGATGGTATCATCCACATCCTGCAGCA Direct Gain 0 0.95335839896023 0 0.999666452407837 prediction 0.906716797920459 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71780216 chr2:71780216 nonsynonymous SNV 0.987 4 21 hPsi_associated_SNPs_105516 1 0 0 0 0 Nucleus 0 0.438715003641337 0.999332904815674 0 hPsi_site_4476 iPseU_CNN:0.999332904815674;iRNA_PseU:0 4477 chr5 63894207 63894207 1 + G A LUSC 63894207 - 63894187 63894227 41 AGTTTGCTTAAAAGGTTTTTCATTTCTCTCATGTCTCTGTA AGTTTGCTTAAAAGGTTTTTTATTTCTCTCATGTCTCTGTA Direct Gain 0 0.953356476752377 0 0.68823629617691 prediction 0.906712953504753 Functional Gain - RGS7BP ENSG00000186479 CDS Human protein_coding chr5:63894207 chr5:63894207 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105517 0 0 0 0 0 exosome 0 0.431024260551884 0.37647259235382 0 hPsi_site_4477 iPseU_CNN:0.37647259235382;iRNA_PseU:0 4478 chr15 34078168 34078168 1 + A T LUSC 34078168 + 34078148 34078188 41 GCATCGATGAGGCCTCCTGGATGAAGCGCATTGCAGGTACC GCATCGATGAGGCCTCCTGGTTGAAGCGCATTGCAGGTACC Direct Gain 0 0.953341477520817 0 0.602211892604828 prediction 0.906682955041635 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:34078168 chr15:34078168 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105518 0 0 0 0 1 exosome 0 0.438718593021156 0.204423785209656 0 hPsi_site_4478 iPseU_CNN:0.204423785209656;iRNA_PseU:0 4479 chr8 59360793 59360793 1 + C T rs147055282 59360793 + 59360773 59360813 41 CCCAGGCTGGAGTGCAATGGCATAATTTCTGCTCACCGCAA CCCAGGCTGGAGTGCAATGGTATAATTTCTGCTCACCGCAA Direct Gain 0 0.953337901879828 0 0.9477898478508 prediction 0.906675803759655 Functional Gain - UBXN2B ENSG00000215114 UTR3 Human protein_coding chr8:59360793 chr8:59360793 . . 0 21 hPsi_associated_SNPs_105519 0 0 1 0 0 Cytosol 0 0.438718589583097 0.8955796957016 0 hPsi_site_4479 iPseU_CNN:0.8955796957016;iRNA_PseU:0 4480 chr1 20940386 20940386 1 + G A BLCA 20940386 - 20940366 20940406 41 GAGAAGCTGCTTACCTCTCTCATGACTTGCCTGCAGGCCCC GAGAAGCTGCTTACCTCTCTTATGACTTGCCTGCAGGCCCC Direct Gain 0 0.953337710523582 0 0.256519556045532 prediction 0.906675421047164 Functional Gain - CDA ENSG00000158825 CDS Human protein_coding chr1:20940386 chr1:20940386 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105520 0 0 0 0 0 nucleus 0 0.438718546362319 0 0 hPsi_site_4480 iPseU_CNN:0;iRNA_PseU:0 4481 chr22 43830976 43830976 1 + G A LUSC 43830976 - 43830956 43830996 41 GTAGCCTGGAGGTTTGGGGGCATCGTGAGGCACCGGGTCCA GTAGCCTGGAGGTTTGGGGGTATCGTGAGGCACCGGGTCCA Direct Gain 0 0.953334120086521 0 0.948900818824768 prediction 0.906668240173041 Functional Gain - MPPED1 ENSG00000186732 CDS Human protein_coding chr22:43830976 chr22:43830976 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_105521 0 0 0 0 0 nucleus 0 0.438741376343736 0.897801637649536 0 hPsi_site_4481 iPseU_CNN:0.897801637649536;iRNA_PseU:0 4482 chr7 99015155 99015155 1 + G A BLCA 99015155 - 99015135 99015175 41 CCGAAGTTGGTGTCCCGTGTCTGAATGCACCGCAGGCAGCA CCGAAGTTGGTGTCCCGTGTTTGAATGCACCGCAGGCAGCA Direct Gain 0 0.953332842539098 0 0.801786541938782 prediction 0.906665685078197 Functional Gain - BUD31 ENSG00000106245 CDS Human protein_coding chr7:99015155 chr7:99015155 synonymous SNV . 0 21 hPsi_associated_SNPs_105522 0 0 0 0 0 Ribosome 0 0.438717646806623 0.603573083877564 0 hPsi_site_4482 iPseU_CNN:0.603573083877564;iRNA_PseU:0 4483 chr5 76722338 76722338 1 + G A SKCM 76722338 - 76722318 76722358 41 CAAACTTTTGCACTTTAGGTCATCTAGTGTCTTCCAGTGTT CAAACTTTTGCACTTTAGGTTATCTAGTGTCTTCCAGTGTT Direct Gain 0 0.953325139397776 0 0.961815118789673 prediction 0.906650278795551 Functional Gain - PDE8B ENSG00000113231 CDS Human protein_coding chr5:76722338 chr5:76722338 nonsynonymous SNV 0.966 1 21 hPsi_associated_SNPs_105523 0 0 0 0 0 Nucleus 0 0.438545002427083 0.923630237579346 0 hPsi_site_4483 iPseU_CNN:0.923630237579346;iRNA_PseU:0 4484 chr3 109128857 109128857 1 + G T BLCA 109128857 + 109128837 109128877 41 AGTAGAGGGCGCACTCTTGTGAGCGGCTTTTGTACCCAGTT AGTAGAGGGCGCACTCTTGTTAGCGGCTTTTGTACCCAGTT Direct Gain 0 0.953323858519315 0 0.920910060405731 prediction 0.90664771703863 Functional Gain - LINC01205 ENSG00000228980;ENSG00000230618 ncRNA_exonic Human other chr3:109128857 chr3:109128857 . . 0 21 hPsi_associated_SNPs_105524 0 0 0 0 0 unknown 0 0.438719573488111 0.841820120811462 0 hPsi_site_4484 iPseU_CNN:0.841820120811462;iRNA_PseU:0 4485 chr19 41727831 41727831 1 + C T LUAD 41727831 + 41727811 41727851 41 GAAGACAGGACTGTGGCCGCCAACACCCCCTTCAACCTGAG GAAGACAGGACTGTGGCCGCTAACACCCCCTTCAACCTGAG Direct Gain 0 0.953315753393264 0 0.604631245136261 prediction 0.906631506786527 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41727831 chr19:41727831 synonymous SNV . 0 21 hPsi_associated_SNPs_105525 0 0 1 0 1 Nucleus 0 0.438718592961669 0.209262490272522 0 hPsi_site_4485 iPseU_CNN:0.209262490272522;iRNA_PseU:0 4486 chr8 102381091 102381091 1 + C T SKCM 102381091 + 102381071 102381111 41 AGACGTGGGTCACGCTCTCTCTGGCTCTCTTTCTGCCGCCA AGACGTGGGTCACGCTCTCTTTGGCTCTCTTTCTGCCGCCA Direct Gain 0 0.95331476405665 0 0.9792839884758 prediction 0.9066295281133 Functional Gain - NACAP1 ENSG00000228224 ncRNA_exonic Human transcribed_processed_pseudogene chr8:102381091 chr8:102381091 . . 0 21 hPsi_associated_SNPs_105526 0 0 0 0 1 unknown 0 0.438415617399736 0.9585679769516 0 hPsi_site_4486 iPseU_CNN:0.9585679769516;iRNA_PseU:0 4487 chr4 31145624 31145624 1 + T A rs188645942 31145624 - 31145604 31145644 41 TATGCCAATGCATCTTTCTTAACCTACCCATGATCCATAAA TATGCCAATGCATCTTTCTTTACCTACCCATGATCCATAAA Direct Gain 0 0.953309942045113 0 0.998519778251648 prediction 0.906619884090227 Functional Gain - PCDH7 ENSG00000169851 UTR3 Human protein_coding chr4:31145624 chr4:31145624 . . 0 21 hPsi_associated_SNPs_105527 0 0 0 0 0 Ribosome 0 0.438695238456334 0.997039556503296 0 hPsi_site_4487 iPseU_CNN:0.997039556503296;iRNA_PseU:0 4488 chr16 7721569 7721569 1 + C A LUAD 7721569 - 7721549 7721589 41 ATTGCCATACACAGGCTCTTGATACACTACTCTATAAGGAA ATTGCCATACACAGGCTCTTTATACACTACTCTATAAGGAA Direct Gain 0 0.953305346934382 0 0.0125839710235596 prediction 0.906610693868765 Functional Gain - RBFOX1 ENSG00000078328 CDS Human protein_coding chr16:7721569 chr16:7721569 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105528 0 0 0 0 0 Cytoplasm 0 0.438718560094785 0 0 hPsi_site_4488 iPseU_CNN:0;iRNA_PseU:0 4489 chr4 75174841 75174841 1 + G A BRCA 75174841 - 75174821 75174861 41 GTGATTGGAGGTGTTACAGTCACGGCTGCCTCTTCGGTCAG GTGATTGGAGGTGTTACAGTTACGGCTGCCTCTTCGGTCAG Direct Gain 0 0.953305303127418 0 0.99656468629837 prediction 0.906610606254835 Functional Gain - EPGN ENSG00000182585 CDS Human protein_coding chr4:75174841 chr4:75174841 synonymous SNV . 0 21 hPsi_associated_SNPs_105529 0 0 0 0 0 exosome 0 0.438716838440448 0.99312937259674 0 hPsi_site_4489 iPseU_CNN:0.99312937259674;iRNA_PseU:0 4490 chr22 41257829 41257829 1 + G T LGG 41257829 + 41257809 41257849 41 TGTCCCGTTTCTCATCATTTGATAATACCTCGTATGCCTCA TGTCCCGTTTCTCATCATTTTATAATACCTCGTATGCCTCA Direct Gain 0 0.953305137272794 0 0.997045516967773 prediction 0.906610274545588 Functional Gain - DNAJB7 ENSG00000172404 CDS Human protein_coding chr22:41257829 chr22:41257829 stopgain 1.000 1 21 hPsi_associated_SNPs_105530 0 0 1 10 0 exosome 0 0.438718597939448 0.994091033935546 0 hPsi_site_4490 iPseU_CNN:0.994091033935546;iRNA_PseU:0 4491 chr20 43997646 43997646 1 + C A rs7099 43997646 - 43997626 43997666 41 AAAAAAAGTTTGGATCACGTGACTTTTGGCCATTTCTAAAA AAAAAAAGTTTGGATCACGTTACTTTTGGCCATTTCTAAAA Direct Gain 0 0.953304986336529 0 0.988289594650269 prediction 0.906609972673058 Functional Gain - SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:43997646 chr20:43997646 . . 0 21 hPsi_associated_SNPs_105531 0 0 0 0 0 exosome 0 0.438718585433476 0.976579189300538 0 hPsi_site_4491 iPseU_CNN:0.976579189300538;iRNA_PseU:0 4492 chr7 99905596 99905596 1 + G A LUAD 99905596 - 99905576 99905616 41 ACCTGATGGTCCCGACACTTCATCATCCACCACCTCCTGGA ACCTGATGGTCCCGACACTTTATCATCCACCACCTCCTGGA Direct Gain 0 0.95330478770657 0 0.972960770130157 prediction 0.90660957541314 Functional Gain - SPDYE3 ENSG00000214300 CDS Human protein_coding chr7:99905596 chr7:99905596 nonsynonymous SNV 0.218 1 21 hPsi_associated_SNPs_105532 0 0 0 0 0 nucleoplasm 0 0.438714387762098 0.945921540260314 0 hPsi_site_4492 iPseU_CNN:0.945921540260314;iRNA_PseU:0 4493 chr20 39788339 39788339 1 + C T ESCA 39788339 + 39788319 39788359 41 AGCTTTCCGGCCGGACCAGTCACATTGCTTTGTCATTCTCT AGCTTTCCGGCCGGACCAGTTACATTGCTTTGTCATTCTCT Direct Gain 0 0.953298671675623 0 0.999999046325684 prediction 0.906597343351246 Functional Gain - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39788339 chr20:39788339 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105533 0 0 1 0 2 Cytosol 0 0.438718521641885 0.999998092651368 0 hPsi_site_4493 iPseU_CNN:0.999998092651368;iRNA_PseU:0 4494 chr8 125499022 125499022 1 + C T LUSC 125499022 + 125499002 125499042 41 CAGACCCTGTATTAATGTCTCTCAGTGCCTCTCATGTGTCA CAGACCCTGTATTAATGTCTTTCAGTGCCTCTCATGTGTCA Direct Gain 0 0.953290718675455 0 0.993992984294891 prediction 0.906581437350909 Functional Gain - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125499022 chr8:125499022 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105534 0 0 1 0 0 Ribosome 0 0.438718033363193 0.987985968589782 0 hPsi_site_4494 iPseU_CNN:0.987985968589782;iRNA_PseU:0 4495 chr5 37064931 37064931 1 + G A BLCA 37064931 - 37064911 37064951 41 GTCTGAACAACTTTATTAGTCAGCTTATTAGCACTCGTTAG GTCTGAACAACTTTATTAGTTAGCTTATTAGCACTCGTTAG Direct Gain 0 0.953290307707065 0 0.76760596036911 prediction 0.90658061541413 Functional Gain - NIPBL ENSG00000164190 CDS Human protein_coding chr5:37064931 chr5:37064931 synonymous SNV . 0 21 hPsi_associated_SNPs_105535 0 0 0 0 0 Nucleus 0 0.438713566713365 0.53521192073822 0 hPsi_site_4495 iPseU_CNN:0.53521192073822;iRNA_PseU:0 4496 chr16 21728295 21728295 1 + C A COAD 21728295 - 21728275 21728315 41 GCCTCCTTAAATCAAAGAGAGACACTTCCTTAAAGAAAGCC GCCTCCTTAAATCAAAGAGATACACTTCCTTAAAGAAAGCC Direct Gain 0 0.953288157179833 0 0.659699201583862 prediction 0.906576314359667 Functional Gain - OTOA ENSG00000155719 CDS Human protein_coding chr16:21728295 chr16:21728295 nonsynonymous SNV 0.992 5 21 hPsi_associated_SNPs_105536 0 0 0 0 0 exosome 0 0.438749404208568 0.319398403167724 0 hPsi_site_4496 iPseU_CNN:0.319398403167724;iRNA_PseU:0 4497 chr17 48652918 48652918 1 + C T SKCM 48652918 + 48652898 48652938 41 CTACAGGTGGGCTCCTTCTTCATGATCAACCTGTGCCTGGT CTACAGGTGGGCTCCTTCTTTATGATCAACCTGTGCCTGGT Direct Gain 0 0.953285361082163 0 0.99637246131897 prediction 0.906570722164325 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48652918 chr17:48652918 synonymous SNV . 0 21 hPsi_associated_SNPs_105537 0 0 0 0 1 exosome 0 0.438727724146694 0.99274492263794 0 hPsi_site_4497 iPseU_CNN:0.99274492263794;iRNA_PseU:0 4498 chr16 4702778 4702778 1 + C A COAD 4702778 - 4702758 4702798 41 GATGCCTGGCAGTAGATGGTGATGGCCACGCGGGCATCGGC GATGCCTGGCAGTAGATGGTTATGGCCACGCGGGCATCGGC Direct Gain 0 0.953284813551123 0 0.999477624893188 prediction 0.906569627102246 Functional Gain - MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4702778 chr16:4702778 synonymous SNV . 0 21 hPsi_associated_SNPs_105538 0 0 0 0 0 Cytosol 0 0.438640156298864 0.998955249786376 0 hPsi_site_4498 iPseU_CNN:0.998955249786376;iRNA_PseU:0 4499 chr17 78305881 78305881 1 + G T UCEC 78305881 + 78305861 78305901 41 AAATGACACCGTGACAGTGAGACTGTCCACCTCCTCGAACT AAATGACACCGTGACAGTGATACTGTCCACCTCCTCGAACT Direct Gain 0 0.953273537878291 0 0.999931871891022 prediction 0.906547075756583 Functional Gain - RNF213 ENSG00000173821 CDS Human protein_coding chr17:78305881 chr17:78305881 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105539 0 0 1 0 1 Nucleus 0 0.439291471030324 0.999863743782044 0 hPsi_site_4499 iPseU_CNN:0.999863743782044;iRNA_PseU:0 4500 chr2 121107189 121107189 1 + C T LUSC 121107189 + 121107169 121107209 41 ATCGGCTGGAACGACTGGATCATAGCACCCACCGGCTACTA ATCGGCTGGAACGACTGGATTATAGCACCCACCGGCTACTA Direct Gain 0 0.953268332587351 0 0.992902874946594 prediction 0.906536665174703 Functional Gain - INHBB ENSG00000163083 CDS Human protein_coding chr2:121107189 chr2:121107189 synonymous SNV . 0 21 hPsi_associated_SNPs_105540 0 0 0 0 0 Endoplasmic reticulum 0 0.438718536783528 0.985805749893188 0 hPsi_site_4500 iPseU_CNN:0.985805749893188;iRNA_PseU:0 4501 chr19 19655534 19655534 1 + T A LUAD 19655534 - 19655514 19655554 41 GCTCAGGCACGTCCAGATTGAACAGGCGCCGCTCCCGGATC GCTCAGGCACGTCCAGATTGTACAGGCGCCGCTCCCGGATC Direct Gain 0 0.953267878722476 0 0.99975597858429 prediction 0.906535757444953 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19655534 chr19:19655534 nonsynonymous SNV 0.985 3 21 hPsi_associated_SNPs_105541 0 0 0 0 0 exosome 0 0.437321936709145 0.99951195716858 0 hPsi_site_4501 iPseU_CNN:0.99951195716858;iRNA_PseU:0 4502 chr4 166149996 166149996 1 + G A OV 166149996 - 166149976 166150016 41 ATGAGCAGAAATTTCCATGTCTTCTGCCACAATTGTGACAT ATGAGCAGAAATTTCCATGTTTTCTGCCACAATTGTGACAT Direct Gain 0 0.95326715199394 0 0.95284116268158 prediction 0.90653430398788 Functional Gain - KLHL2 ENSG00000109466 CDS Human protein_coding chr4:166149996 chr4:166149996 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105542 0 0 0 0 0 chromatin 0 0.43871163338216 0.90568232536316 0 hPsi_site_4502 iPseU_CNN:0.90568232536316;iRNA_PseU:0 4503 chr6 102074270 102074270 1 + C A STAD 102074270 - 102074250 102074290 41 AGATGGCAGCCACCCCAAGAGACAGCTGATCACAGGCTGAA AGATGGCAGCCACCCCAAGATACAGCTGATCACAGGCTGAA Direct Gain 0 0.953260465838145 0 0.99993360042572 prediction 0.906520931676289 Functional Gain - GRIK2 ENSG00000164418 CDS Human protein_coding chr6:102074270 chr6:102074270 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105543 0 0 0 0 0 exosome 0 0.438718593004103 0.99986720085144 0 hPsi_site_4503 iPseU_CNN:0.99986720085144;iRNA_PseU:0 4504 chr3 141327397 141327397 1 + G A BLCA 141327397 - 141327377 141327417 41 GCAGAGTACGTCTATCCATTCATTAGCTTCTACACAGTTAT GCAGAGTACGTCTATCCATTTATTAGCTTCTACACAGTTAT Direct Gain 0 0.953259155761599 0 0.999432444572449 prediction 0.906518311523198 Functional Gain - RASA2 ENSG00000155903 CDS Human protein_coding chr3:141327397 chr3:141327397 nonsynonymous SNV 0.933 3 21 hPsi_associated_SNPs_105544 0 0 0 0 0 chromatin 0 0.437003506210287 0.998864889144898 0 hPsi_site_4504 iPseU_CNN:0.998864889144898;iRNA_PseU:0 4505 chr4 152498952 152498952 1 + A T LIHC 152498952 + 152498932 152498972 41 TTGCTGAGCTCTTGTTCAGGAACAACCACCCCCACTGTGGA TTGCTGAGCTCTTGTTCAGGTACAACCACCCCCACTGTGGA Direct Gain 0 0.953258433642481 0 0.715689897537231 prediction 0.906516867284962 Functional Gain - FAM160A1 ENSG00000164142 CDS Human protein_coding chr4:152498952 chr4:152498952 synonymous SNV . 0 21 hPsi_associated_SNPs_105545 0 0 0 0 0 cytosol 0 0.438718729113584 0.431379795074462 0 hPsi_site_4505 iPseU_CNN:0.431379795074462;iRNA_PseU:0 4506 chr19 13084260 13084260 1 + C T SKCM 13084260 + 13084240 13084280 41 GAAATCATCTGTGCTTTGGTCATTGCTCCTCTCTCTACATC GAAATCATCTGTGCTTTGGTTATTGCTCCTCTCTCTACATC Direct Gain 0 0.953257904394102 0 0.991386413574219 prediction 0.906515808788205 Functional Gain - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13084260 chr19:13084260 nonsynonymous SNV 0.022 2 21 hPsi_associated_SNPs_105546 0 0 0 0 1 Nucleus 0 0.437882761663449 0.982772827148438 0 hPsi_site_4506 iPseU_CNN:0.982772827148438;iRNA_PseU:0 4507 chr1 43663277 43663277 1 + C A rs117105091 43663277 - 43663257 43663297 41 ATGCAGGTAGCTAGACCGGTGATGGGTGCTGAGTGCAATGG ATGCAGGTAGCTAGACCGGTTATGGGTGCTGAGTGCAATGG Direct Gain 0 0.953256490275544 0 0.932678461074829 prediction 0.906512980551089 Functional Gain - CFAP57 ENSG00000243710 CDS Human protein_coding chr1:43663277 chr1:43663277 synonymous SNV . 0 21 hPsi_associated_SNPs_105547 0 0 0 0 0 exosome 0 0.43871837608212 0.865356922149658 0 hPsi_site_4507 iPseU_CNN:0.865356922149658;iRNA_PseU:0 4508 chr16 2554329 2554329 1 + C T rs79502522 2554329 + 2554309 2554349 41 ACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATAT ACAGGGTTTCCATGTACCCTTACCTTCCCCCAAGTCAATAT Direct Gain 0 0.953255091265033 0 0.197129994630814 prediction 0.906510182530065 Functional Gain - TBC1D24 ENSG00000162065 UTR3 Human protein_coding chr16:2554329 chr16:2554329 . . 0 21 hPsi_associated_SNPs_105548 0 0 1 0 0 Cytosol 0 0.438718592994797 0 0 hPsi_site_4508 iPseU_CNN:0;iRNA_PseU:0 4509 chr14 100406362 100406362 1 + C T UCEC 100406362 + 100406342 100406382 41 GGCGGGCACAGCAGCCATGTCACCAATGTCGATTTCCTCTG GGCGGGCACAGCAGCCATGTTACCAATGTCGATTTCCTCTG Direct Gain 0 0.953253890568509 0 0.953683257102966 prediction 0.906507781137018 Functional Gain - EML1 ENSG00000066629 CDS Human protein_coding chr14:100406362 chr14:100406362 synonymous SNV . 0 21 hPsi_associated_SNPs_105549 0 0 0 0 1 Nucleus 0 0.438574895758894 0.907366514205932 0 hPsi_site_4509 iPseU_CNN:0.907366514205932;iRNA_PseU:0 4510 chr1 44069443 44069443 1 + G A STAD 44069443 - 44069423 44069463 41 GGTGACTGTGAAGTGCTGGTCATCCTTGCCGAAATCTATGG GGTGACTGTGAAGTGCTGGTTATCCTTGCCGAAATCTATGG Direct Gain 0 0.953252650651567 0 0.999580502510071 prediction 0.906505301303134 Functional Gain - PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069443 chr1:44069443 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_105550 0 0 0 0 0 Ribosome 0 0.438727296689562 0.999161005020142 0 hPsi_site_4510 iPseU_CNN:0.999161005020142;iRNA_PseU:0 4511 chrX 109696971 109696971 1 + G A UCEC 109696971 - 109696951 109696991 41 GCTGTGGCTCTTGGTAGTGGCATGGGCATCGATCCAGAAAC GCTGTGGCTCTTGGTAGTGGTATGGGCATCGATCCAGAAAC Direct Gain 0 0.953251670721955 0 0.999595820903778 prediction 0.90650334144391 Functional Gain - RTL9 ENSG00000243978 CDS Human protein_coding chrX:109696971 chrX:109696971 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_105551 0 0 0 0 0 unknown 0 0.438718593011505 0.999191641807556 0 hPsi_site_4511 iPseU_CNN:0.999191641807556;iRNA_PseU:0 4512 chr17 66195705 66195705 1 + C T rs567941139 66195705 + 66195685 66195725 41 ACGAGGCCATCCAGGATGTGCACGGCCCGCCGCGGGAGGAG ACGAGGCCATCCAGGATGTGTACGGCCCGCCGCGGGAGGAG Direct Gain 0 0.953244124946292 0 0.998105049133301 prediction 0.906488249892583 Functional Gain - LOC440461 ENSG00000267472 ncRNA_exonic Human processed_pseudogene chr17:66195705 chr17:66195705 . . 0 21 hPsi_associated_SNPs_105552 0 0 0 0 0 unknown 0 0.438718590899964 0.996210098266602 0 hPsi_site_4512 iPseU_CNN:0.996210098266602;iRNA_PseU:0 4513 chr13 111109730 111109730 1 + C T SKCM 111109730 + 111109710 111109750 41 GGAGCAAAAGGAAGAGCAGGCTTCCCTGGGCTTCCCGGCTC GGAGCAAAAGGAAGAGCAGGTTTCCCTGGGCTTCCCGGCTC Direct Gain 0 0.953237871626838 0 0.998497843742371 prediction 0.906475743253677 Functional Gain - COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111109730 chr13:111109730 synonymous SNV . 0 21 hPsi_associated_SNPs_105553 0 0 0 0 2 Cytosol 0 0.438718592943385 0.996995687484742 0 hPsi_site_4513 iPseU_CNN:0.996995687484742;iRNA_PseU:0 4514 chr2 234590757 234590757 1 + C T LGG 234590757 + 234590737 234590777 41 GGGCATGAGGTGGTCGTAGTCATGCCAGAGGTGAGTTGGCA GGGCATGAGGTGGTCGTAGTTATGCCAGAGGTGAGTTGGCA Direct Gain 0 0.953237334747921 0 0.79828405380249 prediction 0.906474669495841 Functional Gain - UGT1A7 ENSG00000244122 CDS Human protein_coding chr2:234590757 chr2:234590757 synonymous SNV . 0 21 hPsi_associated_SNPs_105554 0 0 0 0 0 exosome 0 0.437630776463087 0.59656810760498 0 hPsi_site_4514 iPseU_CNN:0.59656810760498;iRNA_PseU:0 4515 chr5 140256947 140256947 1 + G T COAD 140256947 + 140256927 140256967 41 GTGGGGCTGTACACTGGCGAGATCAGCACGACACGCATCCT GTGGGGCTGTACACTGGCGATATCAGCACGACACGCATCCT Direct Gain 0 0.953231670384607 0 0.913065910339355 prediction 0.906463340769213 Functional Gain - PCDHA12 ENSG00000251664 CDS Human protein_coding chr5:140256947 chr5:140256947 nonsynonymous SNV 0.995 2 21 hPsi_associated_SNPs_105555 0 0 0 0 0 exosome 0 0.442391304842996 0.82613182067871 0 hPsi_site_4515 iPseU_CNN:0.82613182067871;iRNA_PseU:0 4516 chr7 149430351 149430351 1 + C A SKCM 149430351 - 149430331 149430371 41 AGGGGGCAGCTCCGGAGGGGGAGACTCACTGGGCAGCTCAG AGGGGGCAGCTCCGGAGGGGTAGACTCACTGGGCAGCTCAG Direct Gain 0 0.953229952597978 0 0.990703105926514 prediction 0.906459905195955 Functional Gain - KRBA1 ENSG00000133619 CDS Human protein_coding chr7:149430351 chr7:149430351 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_105556 0 0 0 0 0 Cytosol 0 0.43873750398502 0.981406211853028 0 hPsi_site_4516 iPseU_CNN:0.981406211853028;iRNA_PseU:0 4517 chr13 49795214 49795214 1 + C T UCEC 49795214 + 49795194 49795234 41 CAGCTGGGCGCGCTGCGTGTCATGCTGTGGGTCACCACCGC CAGCTGGGCGCGCTGCGTGTTATGCTGTGGGTCACCACCGC Direct Gain 0 0.95322613117614 0 0.999999642372131 prediction 0.90645226235228 Functional Gain - MLNR ENSG00000102539 CDS Human protein_coding chr13:49795214 chr13:49795214 synonymous SNV . 0 21 hPsi_associated_SNPs_105557 0 0 0 0 0 exosome 0 0.441143417928205 0.999999284744262 0 hPsi_site_4517 iPseU_CNN:0.999999284744262;iRNA_PseU:0 4518 chr8 35624574 35624574 1 + C A UCEC 35624574 - 35624554 35624594 41 AAGGACTCACCTCTAGGATTGATGTCTGCACTTGGAGGATC AAGGACTCACCTCTAGGATTTATGTCTGCACTTGGAGGATC Direct Gain 0 0.953223695879259 0 0.542952239513397 prediction 0.906447391758518 Functional Gain - UNC5D ENSG00000156687 CDS Human protein_coding chr8:35624574 chr8:35624574 stopgain 0.993 1 21 hPsi_associated_SNPs_105558 0 0 0 0 0 chromatin 0 0.438732245806969 0.085904479026794 0 hPsi_site_4518 iPseU_CNN:0.085904479026794;iRNA_PseU:0 4519 chr19 17691613 17691613 1 + G T rs202137060 17691613 + 17691593 17691633 41 TACTGGACCCTGGCCTACGTGATCTCCCTGCAAGGCGCCCG TACTGGACCCTGGCCTACGTTATCTCCCTGCAAGGCGCCCG Direct Gain 0 0.953213843923327 0 0.837390542030334 prediction 0.906427687846654 Functional Gain - COLGALT1 ENSG00000130309 CDS Human protein_coding chr19:17691613 chr19:17691613 synonymous SNV . 0 21 hPsi_associated_SNPs_105559 0 0 1 0 0 Ribosome 0 0.438718592957519 0.674781084060668 0 hPsi_site_4519 iPseU_CNN:0.674781084060668;iRNA_PseU:0 4520 chr1 9034438 9034438 1 + C T CESC 9034438 + 9034418 9034458 41 GGGGGCATCGTGGGAGAAGCCAAAATCCAAGAGTACAGCCC GGGGGCATCGTGGGAGAAGCTAAAATCCAAGAGTACAGCCC Direct Gain 0 0.953212939016247 0 0.999983191490173 prediction 0.906425878032494 Functional Gain - CA6 ENSG00000131686 CDS Human protein_coding chr1:9034438 chr1:9034438 stopgain 0.000 0 21 hPsi_associated_SNPs_105560 0 0 0 0 1 exosome 0 0.438718592672591 0.999966382980346 0 hPsi_site_4520 iPseU_CNN:0.999966382980346;iRNA_PseU:0 4521 chr1 153391683 153391683 1 + G A SKCM 153391683 - 153391663 153391703 41 AACTCAGAAAAATCAATCTTCTTATCCTCATTCTTGTCCTT AACTCAGAAAAATCAATCTTTTTATCCTCATTCTTGTCCTT Direct Gain 0 0.953201759314333 0 0.835776805877686 prediction 0.906403518628667 Functional Gain - S100A7A ENSG00000184330 CDS Human protein_coding chr1:153391683 chr1:153391683 synonymous SNV . 0 21 hPsi_associated_SNPs_105561 0 0 0 0 0 unknown 0 0.438719009104214 0.671553611755372 0 hPsi_site_4521 iPseU_CNN:0.671553611755372;iRNA_PseU:0 4522 chr13 32905061 32905061 1 + G T LUSC 32905061 + 32905041 32905081 41 CTATAATTTTTGCAGAATGTGAAAAGCTATTTTTCCAATCA CTATAATTTTTGCAGAATGTTAAAAGCTATTTTTCCAATCA Direct Gain 0 0.953201059451903 0 0.999985337257385 prediction 0.906402118903806 Functional Gain - BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32905061 chr13:32905061 synonymous SNV . 0 21 hPsi_associated_SNPs_105562 0 0 0 0 1 Nucleus 0 0.459466140503464 0.99997067451477 0 hPsi_site_4522 iPseU_CNN:0.99997067451477;iRNA_PseU:0 4523 chr10 26936407 26936407 1 + G A rs184976528 26936407 - 26936387 26936427 41 AACCAGACCGCATCCTGGTTCAGAGTAAACAATCAGGTCCA AACCAGACCGCATCCTGGTTTAGAGTAAACAATCAGGTCCA Direct Gain 0 0.953196165340914 0 0.951991975307465 prediction 0.906392330681829 Functional Gain - FAM238B ENSG00000231976 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:26936407 chr10:26936407 . . 0 21 hPsi_associated_SNPs_105563 0 0 0 0 0 unknown 0 0.438718592992674 0.90398395061493 0 hPsi_site_4523 iPseU_CNN:0.90398395061493;iRNA_PseU:0 4524 chr9 129937055 129937055 1 + C A UCEC 129937055 - 129937035 129937075 41 GGTAGCTACGATACCTGCAAGATCTTCCTTGGAAGAGACTA GGTAGCTACGATACCTGCAATATCTTCCTTGGAAGAGACTA Direct Gain 0 0.953187598070196 0 0.870752930641174 prediction 0.906375196140393 Functional Gain - RALGPS1 ENSG00000136828 CDS Human protein_coding chr9:129937055 chr9:129937055 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105564 0 0 0 0 0 Nucleus 0 0.438718592794956 0.741505861282348 0 hPsi_site_4524 iPseU_CNN:0.741505861282348;iRNA_PseU:0 4525 chr19 49468644 49468644 1 + C T rs11553228 49468644 + 49468624 49468664 41 TCCGGGGACTCTCTTCCAGCCTCCGACCGCCCTCCGATTTC TCCGGGGACTCTCTTCCAGCTTCCGACCGCCCTCCGATTTC Direct Gain 0 0.95318270141668 0 0.932767748832703 prediction 0.906365402833359 Functional Gain - FTL ENSG00000087086 UTR5 Human protein_coding chr19:49468644 chr19:49468644 . . 0 21 hPsi_associated_SNPs_105565 0 0 1 0 0 Cytosol 0 0.438716563834874 0.865535497665406 0 hPsi_site_4525 iPseU_CNN:0.865535497665406;iRNA_PseU:0 4526 chr17 57290862 57290862 1 + C T LUAD 57290862 + 57290842 57290882 41 CATGCCCTTATATATTCTGTCATCCTCTCAAGGTAGAGGGC CATGCCCTTATATATTCTGTTATCCTCTCAAGGTAGAGGGC Direct Gain 0 0.953170582479307 0 0.466392278671265 prediction 0.906341164958614 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57290862 chr17:57290862 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105566 0 0 1 0 0 chromatin 0 0.438718090346408 0 0 hPsi_site_4526 iPseU_CNN:0;iRNA_PseU:0 4527 chr10 38738202 38738202 1 + G A rs576036301 38738202 - 38738182 38738222 41 TGGGAGGAGCCAGTGAGAGGCAGGGGCTCATGTCTCTGGGC TGGGAGGAGCCAGTGAGAGGTAGGGGCTCATGTCTCTGGGC Direct Gain 0 0.95316591317498 0 0.988328576087952 prediction 0.906331826349959 Functional Gain - LINC00999 ENSG00000225119;ENSG00000228882 intergenic Human other chr10:38738202 chr10:38738202 . . 0 21 hPsi_associated_SNPs_105567 0 0 0 0 0 nucleoplasm 0 0.438719036038696 0.976657152175904 0 hPsi_site_4527 iPseU_CNN:0.976657152175904;iRNA_PseU:0 4528 chrX 153694823 153694823 1 + G A LUSC 153694823 - 153694803 153694843 41 CACTCGCTGTCCCTCACAGTCACTGTGACCCTGCTGCCAGC CACTCGCTGTCCCTCACAGTTACTGTGACCCTGCTGCCAGC Direct Gain 0 0.953165663625762 0 0.249169439077377 prediction 0.906331327251524 Functional Gain - PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153694823 chrX:153694823 synonymous SNV . 0 21 hPsi_associated_SNPs_105568 0 0 0 0 0 Endoplasmic reticulum 0 0.435455577261471 0 0 hPsi_site_4528 iPseU_CNN:0;iRNA_PseU:0 4529 chr19 53958149 53958149 1 + C T rs115009768 53958149 + 53958129 53958169 41 CAGAACGATATGATCAAAGTCATGCTAGAAACAAGCCTATT CAGAACGATATGATCAAAGTTATGCTAGAAACAAGCCTATT Direct Gain 0 0.953162455897942 0 0.991467237472534 prediction 0.906324911795884 Functional Gain - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53958149 chr19:53958149 . 0.000 0 21 hPsi_associated_SNPs_105569 0 0 1 0 0 unknown 0 0.438717542500362 0.982934474945068 0 hPsi_site_4529 iPseU_CNN:0.982934474945068;iRNA_PseU:0 4530 chr13 42742882 42742882 1 + C T BLCA 42742882 + 42742862 42742902 41 AGTTCTTGGCTGGGGAGGTTCATATGACGATGACACCCAAC AGTTCTTGGCTGGGGAGGTTTATATGACGATGACACCCAAC Direct Gain 0 0.953162257389928 0 0.26624271273613 prediction 0.906324514779857 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42742882 chr13:42742882 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_105570 0 0 0 0 1 chromatin 0 0.438718974623759 0 0 hPsi_site_4530 iPseU_CNN:0;iRNA_PseU:0 4531 chr4 96761387 96761387 1 + C T LUAD 96761387 + 96761367 96761407 41 GGTGGCATCCCGTAACTCCTCAAATGACGCTACATTTGAAA GGTGGCATCCCGTAACTCCTTAAATGACGCTACATTTGAAA Direct Gain 0 0.953156583483761 0 0.999976992607117 prediction 0.906313166967523 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761387 chr4:96761387 nonsynonymous SNV 0.004 2 21 hPsi_associated_SNPs_105571 0 0 0 0 0 unknown 0 0.43871602207874 0.999953985214234 0 hPsi_site_4531 iPseU_CNN:0.999953985214234;iRNA_PseU:0 4532 chr22 50357577 50357577 1 + G A rs142470900 50357577 - 50357557 50357597 41 GGTACTGAATAAATTAAACGCTCAGGCTCTGGCCCCACCCC GGTACTGAATAAATTAAACGTTCAGGCTCTGGCCCCACCCC Direct Gain 0 0.953146356890699 0 0.912176012992859 prediction 0.906292713781398 Functional Gain - PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357577 chr22:50357577 . . 0 21 hPsi_associated_SNPs_105572 0 0 0 0 0 Ribosome 0 0.438718595391478 0.824352025985718 0 hPsi_site_4532 iPseU_CNN:0.824352025985718;iRNA_PseU:0 4533 chr11 71943737 71943737 1 + G T LIHC 71943737 + 71943717 71943757 41 ACCGGCAGCTCAATGCCTTTGACATCTCTCTGCGTTTCACA ACCGGCAGCTCAATGCCTTTTACATCTCTCTGCGTTTCACA Direct Gain 0 0.953132877668556 0 0.997239708900452 prediction 0.906265755337113 Functional Gain - INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71943737 chr11:71943737 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105573 0 0 0 0 2 Cytosol 0 0.438714913967211 0.994479417800904 0 hPsi_site_4533 iPseU_CNN:0.994479417800904;iRNA_PseU:0 4534 chr22 20077772 20077772 1 + G A LIHC 20077772 - 20077752 20077792 41 CAAAAACTCACCAACGGATTCATCTTTGCACACCTCGACTT CAAAAACTCACCAACGGATTTATCTTTGCACACCTCGACTT Direct Gain 0 0.953130953104314 0 0.884146094322205 prediction 0.906261906208629 Functional Gain - DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20077772 chr22:20077772 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_105574 0 0 0 0 0 Nucleus 0 0.438711569598682 0.76829218864441 0 hPsi_site_4534 iPseU_CNN:0.76829218864441;iRNA_PseU:0 4535 chr4 151504946 151504946 1 + G A SKCM 151504946 - 151504926 151504966 41 AGGTGGCGGTCCCGCAGAGTCTTCAGCACTGAGAGGCACTT AGGTGGCGGTCCCGCAGAGTTTTCAGCACTGAGAGGCACTT Direct Gain 0 0.953130100923197 0 0.965595364570618 prediction 0.906260201846393 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504946 chr4:151504946 synonymous SNV . 0 21 hPsi_associated_SNPs_105575 0 0 1 0 0 nucleus 0 0.438652486611732 0.931190729141236 0 hPsi_site_4535 iPseU_CNN:0.931190729141236;iRNA_PseU:0 4536 chr19 53996380 53996380 1 + C T rs550939529 53996380 + 53996360 53996400 41 TTGGGCCAGGTACAGTGTCTCACACCTGTAATCCCAGCACT TTGGGCCAGGTACAGTGTCTTACACCTGTAATCCCAGCACT Direct Gain 0 0.953129933933951 0 0.999995589256287 prediction 0.906259867867901 Functional Gain - ZNF813 ENSG00000198346 UTR3 Human protein_coding chr19:53996380 chr19:53996380 . . 0 21 hPsi_associated_SNPs_105576 0 0 0 0 0 nucleolus 0 0.438687438698188 0.999991178512574 0 hPsi_site_4536 iPseU_CNN:0.999991178512574;iRNA_PseU:0 4537 chr6 31543608 31543608 1 + C T DLBC 31543608 + 31543588 31543628 41 CCCCAGGGCTCCAGGCGGTGCTTGTTCCTCAGCCTCTTCTC CCCCAGGGCTCCAGGCGGTGTTTGTTCCTCAGCCTCTTCTC Direct Gain 0 0.953129187936257 0 0.186539530754089 prediction 0.906258375872514 Functional Gain - TNF ENSG00000232810 CDS Human protein_coding chr6:31543608 chr6:31543608 synonymous SNV . 0 21 hPsi_associated_SNPs_105577 0 0 0 0 1 Ribosome 0 0.438718595544323 0 0 hPsi_site_4537 iPseU_CNN:0;iRNA_PseU:0 4538 chr17 73016621 73016621 1 + C T rs1044228 73016621 + 73016601 73016641 41 AGGTTAGGAGAGTTGATCCTCACCTCTGAGAGCAGCCGCTA AGGTTAGGAGAGTTGATCCTTACCTCTGAGAGCAGCCGCTA Direct Gain 0 0.953123276268677 0 0.997311592102051 prediction 0.906246552537354 Functional Gain - MRPL58 ENSG00000167862 CDS Human protein_coding chr17:73016621 chr17:73016621 synonymous SNV . 0 21 hPsi_associated_SNPs_105578 0 0 1 0 1 nucleoplasm 0 0.438718592995177 0.994623184204102 0 hPsi_site_4538 iPseU_CNN:0.994623184204102;iRNA_PseU:0 4539 chr16 85111185 85111185 1 + C T UCEC 85111185 + 85111165 85111205 41 AGGACTGAGAATGTCAAGGGCTTCTTCGGGGGGCTGGAGAC AGGACTGAGAATGTCAAGGGTTTCTTCGGGGGGCTGGAGAC Direct Gain 0 0.953116763444299 0 0.443219572305679 prediction 0.906233526888599 Functional Gain - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85111185 chr16:85111185 synonymous SNV . 0 21 hPsi_associated_SNPs_105579 0 0 0 0 1 Nucleus 0 0.438718592527923 0 0 hPsi_site_4539 iPseU_CNN:0;iRNA_PseU:0 4540 chr1 145297669 145297669 1 + G A UCEC 145297669 - 145297649 145297689 41 GGGGGCAGATGATTCCAGTACTTTCTCAGCCTCCTCAACTT GGGGGCAGATGATTCCAGTATTTTCTCAGCCTCCTCAACTT Direct Gain 0 0.953112903028706 0 0.826489090919495 prediction 0.906225806057413 Functional Gain - NBPF10 ENSG00000163386 CDS Human other chr1:145297669 chr1:145297669 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105580 0 0 0 0 0 chromatin 0 0.438718592172718 0.65297818183899 0 hPsi_site_4540 iPseU_CNN:0.65297818183899;iRNA_PseU:0 4541 chr12 133197702 133197702 1 + C T KIRP 133197702 + 133197682 133197722 41 CAAGCACGTGCCTGCCTCGTCAGGCTACAACTTCAGGTGCT CAAGCACGTGCCTGCCTCGTTAGGCTACAACTTCAGGTGCT Direct Gain 0 0.953111331657088 0 0.973310530185699 prediction 0.906222663314176 Functional Gain - P2RX2 ENSG00000187848 CDS Human protein_coding chr12:133197702 chr12:133197702 nonsynonymous SNV 0.819 2 21 hPsi_associated_SNPs_105581 0 0 0 0 1 exosome 0 0.439048926072002 0.946621060371398 0 hPsi_site_4541 iPseU_CNN:0.946621060371398;iRNA_PseU:0 4542 chr20 62666038 62666038 1 + G A rs116569600 62666038 - 62666018 62666058 41 AAAAGCTGCAGGACTCTCTTCATCTTCAGAATAAATGTTGA AAAAGCTGCAGGACTCTCTTTATCTTCAGAATAAATGTTGA Direct Gain 0 0.953110252759851 0 0.99934983253479 prediction 0.906220505519701 Functional Gain - C20orf204 ENSG00000196421 ncRNA_exonic Human protein_coding chr20:62666038 chr20:62666038 . . 0 21 hPsi_associated_SNPs_105582 0 0 0 0 0 unknown 0 0.442458866406657 0.99869966506958 0 hPsi_site_4542 iPseU_CNN:0.99869966506958;iRNA_PseU:0 4543 chr1 93730263 93730263 1 + T A UCEC 93730263 - 93730243 93730283 41 GCATGGTTCTCTTGATGTGAAATCATCTATATAGCCCCAGA GCATGGTTCTCTTGATGTGATATCATCTATATAGCCCCAGA Direct Gain 0 0.953108392947506 0 0.99307656288147 prediction 0.906216785895012 Functional Gain - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93730263 chr1:93730263 synonymous SNV . 0 21 hPsi_associated_SNPs_105583 0 0 0 0 0 chromatin 0 0.438718600090553 0.98615312576294 0 hPsi_site_4543 iPseU_CNN:0.98615312576294;iRNA_PseU:0 4544 chr19 9297698 9297698 1 + G T rs10402805 9297698 + 9297678 9297718 41 TCCGCCTCCCGGGTTCAAGTGATTCTTCTGTCTCAGCCTCC TCCGCCTCCCGGGTTCAAGTTATTCTTCTGTCTCAGCCTCC Direct Gain 0 0.953105802305793 0 0.997104465961456 prediction 0.906211604611585 Functional Gain - OR7D2 ENSG00000188000 UTR3 Human protein_coding chr19:9297698 chr19:9297698 . . 0 21 hPsi_associated_SNPs_105584 0 0 0 1 0 Nucleus 0 0.438718519758781 0.994208931922912 0 hPsi_site_4544 iPseU_CNN:0.994208931922912;iRNA_PseU:0 4545 chr12 125834371 125834371 1 + C A OV 125834371 - 125834351 125834391 41 TCATCCCAGCCCATGCCAGTGACATAAAACAAGGTCTGCAC TCATCCCAGCCCATGCCAGTTACATAAAACAAGGTCTGCAC Direct Gain 0 0.953101470232052 0 0.970333874225616 prediction 0.906202940464104 Functional Gain - TMEM132B ENSG00000139364 CDS Human protein_coding chr12:125834371 chr12:125834371 synonymous SNV . 0 21 hPsi_associated_SNPs_105585 0 0 0 0 0 exosome 0 0.438695925550259 0.940667748451232 0 hPsi_site_4545 iPseU_CNN:0.940667748451232;iRNA_PseU:0 4546 chr12 125834737 125834737 1 + C A BLCA 125834737 - 125834717 125834757 41 AGATCATCTTGGGTTGGGTAGACCACCACACTCCCAATCCT AGATCATCTTGGGTTGGGTATACCACCACACTCCCAATCCT Direct Gain 0 0.953095644644786 0 0.913536906242371 prediction 0.906191289289572 Functional Gain - TMEM132B ENSG00000139364 CDS Human protein_coding chr12:125834737 chr12:125834737 synonymous SNV . 0 21 hPsi_associated_SNPs_105586 0 0 0 0 0 exosome 0 0.438718644346936 0.827073812484742 0 hPsi_site_4546 iPseU_CNN:0.827073812484742;iRNA_PseU:0 4547 chr6 26509435 26509435 1 + C T rs76709174 26509435 + 26509415 26509455 41 CTCATCTGTTTTCCTTTCCTCTAACCCCTCTCCTCCATAGC CTCATCTGTTTTCCTTTCCTTTAACCCCTCTCCTCCATAGC Direct Gain 0 0.95309455795031 0 0.801766216754913 prediction 0.906189115900621 Functional Gain - BTN1A1 ENSG00000124557 UTR3 Human protein_coding chr6:26509435 chr6:26509435 . . 0 21 hPsi_associated_SNPs_105587 0 0 0 0 0 nucleoplasm 0 0.438718592991622 0.603532433509826 0 hPsi_site_4547 iPseU_CNN:0.603532433509826;iRNA_PseU:0 4548 chr22 31654373 31654373 1 + C A COAD 31654373 - 31654353 31654393 41 AGCAGGGAGCACCCATGACAGAACTCCCCAAACTTCCCCCA AGCAGGGAGCACCCATGACATAACTCCCCAAACTTCCCCCA Direct Gain 0 0.953092557928412 0 0.995617985725403 prediction 0.906185115856823 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31654373 chr22:31654373 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_105588 0 0 0 0 0 Cytosol 0 0.438718581713894 0.991235971450806 0 hPsi_site_4548 iPseU_CNN:0.991235971450806;iRNA_PseU:0 4549 chr17 7416688 7416688 1 + C T LUAD 7416688 + 7416668 7416708 41 GTCTCCCAGCTACTCACCGACATCTCCCAGCTACTCGCCAA GTCTCCCAGCTACTCACCGATATCTCCCAGCTACTCGCCAA Direct Gain 0 0.953084879971426 0 0.998461604118347 prediction 0.906169759942851 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7416688 chr17:7416688 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_105589 0 0 1 0 0 Nucleus 0 0.438718592995102 0.996923208236694 0 hPsi_site_4549 iPseU_CNN:0.996923208236694;iRNA_PseU:0 4550 chr2 179345630 179345630 1 + C A UCEC 179345630 - 179345610 179345650 41 ACGAGCCCCCATACCTGTGAGATAGTTGGTCCACTTGTACA ACGAGCCCCCATACCTGTGATATAGTTGGTCCACTTGTACA Direct Gain 0 0.953074214062002 0 0.00211837887763977 prediction 0.906148428124003 Functional Gain - PLEKHA3 ENSG00000116095 CDS Human protein_coding chr2:179345630 chr2:179345630 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105590 0 0 0 0 0 Ribosome 0 0.438713781613213 0 0 hPsi_site_4550 iPseU_CNN:0;iRNA_PseU:0 4551 chr7 48411860 48411860 1 + C T COAD 48411860 + 48411840 48411880 41 ATAAGCAGTGCTACTCTGGCCATCGTTCTGAAAACAAGTGG ATAAGCAGTGCTACTCTGGCTATCGTTCTGAAAACAAGTGG Direct Gain 0 0.953071039763469 0 0.999650120735168 prediction 0.906142079526937 Functional Gain - ABCA13 ENSG00000179869 CDS Human protein_coding chr7:48411860 chr7:48411860 synonymous SNV . 0 21 hPsi_associated_SNPs_105591 0 0 0 0 1 Nucleus 0 0.438718625303623 0.999300241470336 0 hPsi_site_4551 iPseU_CNN:0.999300241470336;iRNA_PseU:0 4552 chr21 31973557 31973557 1 + G A HNSC 31973557 - 31973537 31973577 41 GCCAGAAAACCAAGATCTTTCATAACACCATGGGCAGTAGC GCCAGAAAACCAAGATCTTTTATAACACCATGGGCAGTAGC Direct Gain 0 0.953070480820249 0 0.995206713676453 prediction 0.906140961640497 Functional Gain - KRTAP22-1 ENSG00000186924 CDS Human protein_coding chr21:31973557 chr21:31973557 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105592 0 0 0 0 0 unknown 0 0.438718509228112 0.990413427352906 0 hPsi_site_4552 iPseU_CNN:0.990413427352906;iRNA_PseU:0 4553 chr18 32889230 32889230 1 + C T ESCA 32889230 + 32889210 32889250 41 ATAATAAATACATATTTGGTCTTCATCCCCTGGTACAGAGC ATAATAAATACATATTTGGTTTTCATCCCCTGGTACAGAGC Direct Gain 0 0.953065858009719 0 0.998283207416534 prediction 0.906131716019439 Functional Gain - ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32889230 chr18:32889230 . . 0 21 hPsi_associated_SNPs_105593 0 0 1 0 0 unknown 0 0.438422524314911 0.996566414833068 0 hPsi_site_4553 iPseU_CNN:0.996566414833068;iRNA_PseU:0 4554 chr16 89806445 89806445 1 + C T rs17227361 89806445 + 89806425 89806465 41 GCCAGCCAGGATATCTTCCTCTTCTCTAAACACTCGAGGAT GCCAGCCAGGATATCTTCCTTTTCTCTAAACACTCGAGGAT Direct Gain 0 0.953060922435706 0 0.893959641456604 prediction 0.906121844871412 Functional Gain - FANCA ENSG00000187741 CDS Human protein_coding chr16:89806445 chr16:89806445 synonymous SNV . 0 21 hPsi_associated_SNPs_105594 1 0 1 0 0 Cytosol 0 0.438726140070514 0.787919282913208 0 hPsi_site_4554 iPseU_CNN:0.787919282913208;iRNA_PseU:0 4555 chr3 46399808 46399808 1 + C T SKCM 46399808 + 46399788 46399828 41 CTCCCTATAATATTGTCATTCTCCTGAACACCTTCCAGGAA CTCCCTATAATATTGTCATTTTCCTGAACACCTTCCAGGAA Direct Gain 0 0.953050279752628 0 0.914936423301697 prediction 0.906100559505257 Functional Gain - CCR2 ENSG00000121807 CDS Human protein_coding chr3:46399808 chr3:46399808 nonsynonymous SNV 0.038 1 21 hPsi_associated_SNPs_105595 0 0 0 0 0 exosome 0 0.438718589518391 0.829872846603394 0 hPsi_site_4555 iPseU_CNN:0.829872846603394;iRNA_PseU:0 4556 chr11 66314504 66314504 1 + C A UCEC 66314504 - 66314484 66314524 41 AGCAGCAGGTCGCGGTCCCAGTCCTCCTCCTGTTCCATGTA AGCAGCAGGTCGCGGTCCCATTCCTCCTCCTGTTCCATGTA Direct Gain 0 0.953049904843574 0 0.999942302703857 prediction 0.906099809687147 Functional Gain - ACTN3 ENSG00000248746 CDS Human protein_coding chr11:66314504 chr11:66314504 nonsynonymous SNV 0.956 0 21 hPsi_associated_SNPs_105596 0 0 0 0 0 Cytosol 0 0.438517502712657 0.999884605407714 0 hPsi_site_4556 iPseU_CNN:0.999884605407714;iRNA_PseU:0 4557 chr9 91159449 91159449 1 + A T UCEC 91159449 + 91159429 91159469 41 GGCGGCCGATATCTTCCAGAATTTCTCCGTTTGAAGTGGGA GGCGGCCGATATCTTCCAGATTTTCTCCGTTTGAAGTGGGA Direct Gain 0 0.953048514670891 0 0.982288241386414 prediction 0.906097029341783 Functional Gain - NXNL2 ENSG00000130045 CDS Human protein_coding chr9:91159449 chr9:91159449 nonsynonymous SNV 0.033 5 21 hPsi_associated_SNPs_105597 0 0 0 0 0 Nucleus 0 0.438705952465568 0.964576482772828 0 hPsi_site_4557 iPseU_CNN:0.964576482772828;iRNA_PseU:0 4558 chr17 58011538 58011538 1 + G A BLCA 58011538 - 58011518 58011558 41 AGTCCAAAGTCTGTTAGTTTCACATGACCTACAATGAAAGA AGTCCAAAGTCTGTTAGTTTTACATGACCTACAATGAAAGA Direct Gain 0 0.953045760332663 0 0.974348187446594 prediction 0.906091520665325 Functional Gain - RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58011538 chr17:58011538 synonymous SNV . 0 21 hPsi_associated_SNPs_105598 0 0 0 0 0 Ribosome 0 0.441885288418923 0.948696374893188 0 hPsi_site_4558 iPseU_CNN:0.948696374893188;iRNA_PseU:0 4559 chr19 41707228 41707228 1 + C T SKCM 41707228 + 41707208 41707248 41 GGGACGATGACGGTCAGCACCACGGTCGGCTATACCCTCCT GGGACGATGACGGTCAGCACTACGGTCGGCTATACCCTCCT Direct Gain 0 0.953036351439469 0 0.992012679576874 prediction 0.906072702878938 Functional Gain - CYP2S1 ENSG00000167600 CDS Human protein_coding chr19:41707228 chr19:41707228 nonsynonymous SNV 0.087 0 21 hPsi_associated_SNPs_105599 0 0 0 0 2 Ribosome 0 0.438764155183742 0.984025359153748 0 hPsi_site_4559 iPseU_CNN:0.984025359153748;iRNA_PseU:0 4560 chr10 50860015 50860015 1 + G A LGG 50860015 - 50859995 50860035 41 GAGGGCCACCTGGATGAAGGCATCAGGGCTGCATTTCTGCT GAGGGCCACCTGGATGAAGGTATCAGGGCTGCATTTCTGCT Direct Gain 0 0.953030801823161 0 0.988215923309326 prediction 0.906061603646322 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50860015 chr10:50860015 nonsynonymous SNV 0.974 3 21 hPsi_associated_SNPs_105600 0 0 0 0 0 unknown 0 0.438718595403514 0.976431846618652 0 hPsi_site_4560 iPseU_CNN:0.976431846618652;iRNA_PseU:0 4561 chr20 62153042 62153042 1 + G T rs549303880 62153042 + 62153022 62153062 41 TCTCCCCAAGGCTGACCCGGGTCATTGGTGGGCCAGCTTCT TCTCCCCAAGGCTGACCCGGTTCATTGGTGGGCCAGCTTCT Direct Gain 0 0.953019645436778 0 0.91570508480072 prediction 0.906039290873557 Functional Gain - PPDPF ENSG00000125534 CDS Human protein_coding chr20:62153042 chr20:62153042 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_105601 0 0 1 0 1 Cytosol 0 0.438728179573475 0.83141016960144 0 hPsi_site_4561 iPseU_CNN:0.83141016960144;iRNA_PseU:0 4562 chr17 30361933 30361933 1 + C T BLCA 30361933 + 30361913 30361953 41 TCATTGCATTTTTCAGAATTCTCAATCGCAATCCTCTGACT TCATTGCATTTTTCAGAATTTTCAATCGCAATCCTCTGACT Direct Gain 0 0.953018694408385 0 0.964237153530121 prediction 0.90603738881677 Functional Gain - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30361933 chr17:30361933 nonsynonymous SNV 0.934 3 21 hPsi_associated_SNPs_105602 0 0 1 0 2 chromatin 0 0.43798507645223 0.928474307060242 0 hPsi_site_4562 iPseU_CNN:0.928474307060242;iRNA_PseU:0 4563 chr6 131602702 131602702 1 + G A BLCA 131602702 - 131602682 131602722 41 CTTACTGAGCCTTACTAGTTCAGCGTCATCGGGCTCCCCTC CTTACTGAGCCTTACTAGTTTAGCGTCATCGGGCTCCCCTC Direct Gain 0 0.953013623440034 0 0.994059920310974 prediction 0.906027246880068 Functional Gain - AKAP7 ENSG00000118507 CDS Human protein_coding chr6:131602702 chr6:131602702 nonsynonymous SNV 0.723 3 21 hPsi_associated_SNPs_105603 0 0 0 0 0 cytosol 0 0.438718578783983 0.988119840621948 0 hPsi_site_4563 iPseU_CNN:0.988119840621948;iRNA_PseU:0 4564 chr10 124396729 124396729 1 + C T SKCM 124396729 + 124396709 124396749 41 TTTTCTGCCAGTGACCTTGTCATTTCCACCTGGAATGGATA TTTTCTGCCAGTGACCTTGTTATTTCCACCTGGAATGGATA Direct Gain 0 0.953007700181997 0 0.999424278736115 prediction 0.906015400363994 Functional Gain - DMBT1 ENSG00000187908 CDS Human protein_coding chr10:124396729 chr10:124396729 synonymous SNV . 0 21 hPsi_associated_SNPs_105604 0 0 0 0 2 exosome 0 0.43871859299456 0.99884855747223 0 hPsi_site_4564 iPseU_CNN:0.99884855747223;iRNA_PseU:0 4565 chr11 17800909 17800909 1 + G A rs142092022 17800909 - 17800889 17800929 41 AGCGGGGTATTGGCAGAGGGCAGCTTGAGCGTCCCTGAGGA AGCGGGGTATTGGCAGAGGGTAGCTTGAGCGTCCCTGAGGA Direct Gain 0 0.953006434512305 0 0.999903976917267 prediction 0.90601286902461 Functional Gain - KCNC1 ENSG00000129159 intronic Human protein_coding chr11:17800909 chr11:17800909 . . 0 21 hPsi_associated_SNPs_105605 0 0 0 0 0 exosome 0 0.438718592998254 0.999807953834534 0 hPsi_site_4565 iPseU_CNN:0.999807953834534;iRNA_PseU:0 4566 chr5 170351451 170351451 1 + G T UCEC 170351451 + 170351431 170351471 41 AGCAGATGTGAATATGAAAAGACATGTGCTCTTCTTGTGCA AGCAGATGTGAATATGAAAATACATGTGCTCTTCTTGTGCA Direct Gain 0 0.953005165688394 0 0.95155930519104 prediction 0.906010331376789 Functional Gain - RANBP17 ENSG00000204764 CDS Human protein_coding chr5:170351451 chr5:170351451 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105606 0 0 0 0 1 nucleus 0 0.458240336004036 0.90311861038208 0 hPsi_site_4566 iPseU_CNN:0.90311861038208;iRNA_PseU:0 4567 chr7 143657094 143657094 1 + G A LUSC 143657094 - 143657074 143657114 41 CAGGCCGAGGAGAATAAATTCACTCACCCAAGTCTGGTTAT CAGGCCGAGGAGAATAAATTTACTCACCCAAGTCTGGTTAT Direct Gain 0 0.953004590357919 0 0.429662108421326 prediction 0.906009180715837 Functional Gain - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657094 chr7:143657094 nonsynonymous SNV 0.447 1 21 hPsi_associated_SNPs_105607 0 0 0 0 0 unknown 0 0.438718592995102 0 0 hPsi_site_4567 iPseU_CNN:0;iRNA_PseU:0 4568 chr5 647960 647960 1 + G A SKCM 647960 - 647940 647980 41 TCCAGGTGCTGCTTCAGTTCCACAATCTCGCCACACAGCCT TCCAGGTGCTGCTTCAGTTCTACAATCTCGCCACACAGCCT Direct Gain 0 0.953002054755392 0 0.0664577186107635 prediction 0.906004109510785 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:647960 chr5:647960 synonymous SNV . 0 21 hPsi_associated_SNPs_105608 0 0 0 0 0 chromatin 0 0.439625526892289 0 0 hPsi_site_4568 iPseU_CNN:0;iRNA_PseU:0 4569 chr20 10536903 10536903 1 + G T BLCA 10536903 + 10536883 10536923 41 GGAATTTTGCTGTCCTCGTGGATCTTCATATCTTGCCACAA GGAATTTTGCTGTCCTCGTGTATCTTCATATCTTGCCACAA Direct Gain 0 0.952999248708123 0 0.822322010993958 prediction 0.905998497416247 Functional Gain - SLX4IP ENSG00000149346 CDS Human protein_coding chr20:10536903 chr20:10536903 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105609 0 0 1 0 1 chromatin 0 0.438886333726919 0.644644021987916 0 hPsi_site_4569 iPseU_CNN:0.644644021987916;iRNA_PseU:0 4570 chr22 29688506 29688506 1 + G A OV 29688506 - 29688486 29688526 41 TACATAAATTGCACTGTTGTCAGAGTCTTCATCTGGATCTA TACATAAATTGCACTGTTGTTAGAGTCTTCATCTGGATCTA Direct Gain 0 0.952969654547188 0 0.999912083148956 prediction 0.905939309094376 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29688506 chr22:29688506 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105610 0 0 0 0 0 Cytosol 0 0.438802434006351 0.999824166297912 0 hPsi_site_4570 iPseU_CNN:0.999824166297912;iRNA_PseU:0 4571 chr22 45182484 45182484 1 + C T UCEC 45182484 + 45182464 45182504 41 ACATGGCATTCTGCAGGTGGCAGGTAGGGCCCCAGCTGGGC ACATGGCATTCTGCAGGTGGTAGGTAGGGCCCCAGCTGGGC Direct Gain 0 0.952962924261319 0 0.999071776866913 prediction 0.905925848522638 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45182484 chr22:45182484 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_105611 0 0 0 3 1 unknown 0 0.438718594672196 0.998143553733826 0 hPsi_site_4571 iPseU_CNN:0.998143553733826;iRNA_PseU:0 4572 chr14 24780920 24780920 1 + G A BLCA 24780920 - 24780900 24780940 41 TCCCATTCCGGACCGTCCTTCTCCATCCCACCCCCCGGGTC TCCCATTCCGGACCGTCCTTTTCCATCCCACCCCCCGGGTC Direct Gain 0 0.95296271787024 0 0.997358918190002 prediction 0.905925435740481 Functional Gain - LTB4R2 ENSG00000213906;ENSG00000272658 CDS Human other chr14:24780920 chr14:24780920 synonymous SNV . 0 21 hPsi_associated_SNPs_105612 0 0 0 0 0 chromatin 0 0.439245285558131 0.994717836380004 0 hPsi_site_4572 iPseU_CNN:0.994717836380004;iRNA_PseU:0 4573 chr2 204161222 204161222 1 + G A rs142547646 204161222 - 204161202 204161242 41 AAAAGTTTTCATTACTAATTCATCATCAAACCGATCTGGAT AAAAGTTTTCATTACTAATTTATCATCAAACCGATCTGGAT Direct Gain 0 0.952958471109339 0 0.420156925916672 prediction 0.905916942218679 Functional Gain - CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204161222 chr2:204161222 nonsynonymous SNV 0.399 2 21 hPsi_associated_SNPs_105613 0 0 0 0 0 Nucleus 0 0.438712464600017 0 0 hPsi_site_4573 iPseU_CNN:0;iRNA_PseU:0 4574 chr18 60052393 60052393 1 + C T rs548628692 60052393 + 60052373 60052413 41 GAGGAAGACCACCCGGCATTCTCTGCCCACTTTGCCTTCCA GAGGAAGACCACCCGGCATTTTCTGCCCACTTTGCCTTCCA Direct Gain 0 0.952957416846174 0 0.770649671554565 prediction 0.905914833692348 Functional Gain - TNFRSF11A ENSG00000141655 UTR3 Human protein_coding chr18:60052393 chr18:60052393 . . 0 21 hPsi_associated_SNPs_105614 0 0 1 1 0 nucleus 0 0.438718592994953 0.54129934310913 0 hPsi_site_4574 iPseU_CNN:0.54129934310913;iRNA_PseU:0 4575 chr5 36995809 36995809 1 + G T SARC 36995809 + 36995789 36995829 41 ATGCCACTTTGTGAACGTGTGAAAATGAACAAACGCAAGCG ATGCCACTTTGTGAACGTGTTAAAATGAACAAACGCAAGCG Direct Gain 0 0.952956836037492 0 0.999980509281158 prediction 0.905913672074984 Functional Gain - NIPBL ENSG00000164190 CDS Human protein_coding chr5:36995809 chr5:36995809 synonymous SNV . 0 21 hPsi_associated_SNPs_105615 0 0 1 0 2 Nucleus 0 0.436505006022564 0.999961018562316 0 hPsi_site_4575 iPseU_CNN:0.999961018562316;iRNA_PseU:0 4576 chr12 54971083 54971083 1 + G A SKCM 54971083 - 54971063 54971103 41 ATTCCCATTCTGGTTGTGTTCATCTTCGGCAGGGGATGGGG ATTCCCATTCTGGTTGTGTTTATCTTCGGCAGGGGATGGGG Direct Gain 0 0.95295128091263 0 0.538898229598999 prediction 0.90590256182526 Functional Gain - PDE1B ENSG00000123360 CDS Human protein_coding chr12:54971083 chr12:54971083 nonsynonymous SNV 0.987 0 21 hPsi_associated_SNPs_105616 0 0 0 0 0 exosome 0 0.438719640445392 0.077796459197998 0 hPsi_site_4576 iPseU_CNN:0.077796459197998;iRNA_PseU:0 4577 chr7 31692355 31692355 1 + C T LUSC 31692355 + 31692335 31692375 41 GGAGAACAGCACCAGGATGTCTCCTTCATCATCAGCTTGGG GGAGAACAGCACCAGGATGTTTCCTTCATCATCAGCTTGGG Direct Gain 0 0.952941311139714 0 0.999997794628143 prediction 0.905882622279428 Functional Gain - CCDC129 ENSG00000180347 CDS Human protein_coding chr7:31692355 chr7:31692355 nonsynonymous SNV 0.089 3 21 hPsi_associated_SNPs_105617 0 0 0 0 1 exosome 0 0.445308850494679 0.999995589256286 0 hPsi_site_4577 iPseU_CNN:0.999995589256286;iRNA_PseU:0 4578 chr8 122656673 122656673 1 + T A rs62526466 122656673 - 122656653 122656693 41 GCTGTGGGATGGAGGTCAGCAACAACATATTGCTAAGTCAC GCTGTGGGATGGAGGTCAGCTACAACATATTGCTAAGTCAC Direct Gain 0 0.952937675413031 0 0.490203619003296 prediction 0.905875350826061 Functional Gain - HAS2-AS1 ENSG00000248690 ncRNA_exonic Human antisense chr8:122656673 chr8:122656673 . . 0 21 hPsi_associated_SNPs_105618 0 0 0 0 0 unknown 0 0.438742562909743 0 0 hPsi_site_4578 iPseU_CNN:0;iRNA_PseU:0 4579 chr6 131900261 131900261 1 + G A SKCM 131900261 - 131900241 131900281 41 GGCAGGTCCCCATAATCCTTCACATCACACTCTAAAATTAA GGCAGGTCCCCATAATCCTTTACATCACACTCTAAAATTAA Direct Gain 0 0.952937533690395 0 0.999081373214722 prediction 0.90587506738079 Functional Gain - ARG1 ENSG00000118520 CDS Human protein_coding chr6:131900261 chr6:131900261 synonymous SNV . 0 21 hPsi_associated_SNPs_105619 0 0 0 0 0 exosome 0 0.438718570402747 0.998162746429444 0 hPsi_site_4579 iPseU_CNN:0.998162746429444;iRNA_PseU:0 4580 chr9 130575853 130575853 1 + G A LUSC 130575853 - 130575833 130575873 41 AGTGCGGGCTCCAGCAGCTTCAGGACACCACCCACCAGGTG AGTGCGGGCTCCAGCAGCTTTAGGACACCACCCACCAGGTG Direct Gain 0 0.952936926799599 0 0.399082601070404 prediction 0.905873853599198 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130575853 chr9:130575853 synonymous SNV . 0 21 hPsi_associated_SNPs_105620 0 0 0 0 0 Cytosol 0 0.438718593986056 0 0 hPsi_site_4580 iPseU_CNN:0;iRNA_PseU:0 4581 chr11 12959847 12959847 1 + C A rs116821773 12959847 - 12959827 12959867 41 GGAGCAGAGATGCTAAAACTGATGAGCCTTTTACTTGTCTA GGAGCAGAGATGCTAAAACTTATGAGCCTTTTACTTGTCTA Direct Gain 0 0.952934777559805 0 0.99947190284729 prediction 0.90586955511961 Functional Gain - TEAD1 ENSG00000187079 UTR3 Human protein_coding chr11:12959847 chr11:12959847 . . 0 21 hPsi_associated_SNPs_105621 0 0 0 0 0 Cytosol 0 0.438718593059171 0.99894380569458 0 hPsi_site_4581 iPseU_CNN:0.99894380569458;iRNA_PseU:0 4582 chr3 184298540 184298540 1 + G T LUAD 184298540 + 184298520 184298560 41 GGGAAGATCCCCATCCGCTGGACTGCCCCAGAGGCCATAGC GGGAAGATCCCCATCCGCTGTACTGCCCCAGAGGCCATAGC Direct Gain 0 0.952931083929419 0 0.997974872589111 prediction 0.905862167858839 Functional Gain - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184298540 chr3:184298540 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_105622 0 0 0 0 1 Endoplasmic reticulum 0 0.438718592766245 0.995949745178222 0 hPsi_site_4582 iPseU_CNN:0.995949745178222;iRNA_PseU:0 4583 chr22 23230409 23230409 1 + G A DLBC 23230409 - 23230389 23230429 41 GGCTCCGCAGGCTGGATCGGCTGCTTCCAACTGAGGCTCCA GGCTCCGCAGGCTGGATCGGTTGCTTCCAACTGAGGCTCCA Direct Gain 0 0.952926966631906 0 0.999993026256561 prediction 0.905853933263811 Functional Gain - IGLL5 ENSG00000254709 CDS Human protein_coding chr22:23230409 chr22:23230409 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_105623 0 0 0 0 0 exosome 0 0.438716703031707 0.999986052513122 0 hPsi_site_4583 iPseU_CNN:0.999986052513122;iRNA_PseU:0 4584 chr2 48734478 48734478 1 + C T SARC 48734478 + 48734458 48734498 41 AAGGATAGTGGAACTTACGTCTCAGTTGCAGCTGGCTGACA AAGGATAGTGGAACTTACGTTTCAGTTGCAGCTGGCTGACA Direct Gain 0 0.952926422012198 0 0.919495820999146 prediction 0.905852844024395 Functional Gain - PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48734478 chr2:48734478 nonsynonymous SNV 0.962 3 21 hPsi_associated_SNPs_105624 0 0 1 0 2 Cytosol 0 0.438650833881599 0.838991641998292 0 hPsi_site_4584 iPseU_CNN:0.838991641998292;iRNA_PseU:0 4585 chr17 19480703 19480703 1 + C T UCEC 19480703 + 19480683 19480723 41 AAAGACAGGCGAGCCTCAGTCAGATCAGCAGATGCGCCAAG AAAGACAGGCGAGCCTCAGTTAGATCAGCAGATGCGCCAAG Direct Gain 0 0.952925543041962 0 0.999817609786987 prediction 0.905851086083923 Functional Gain - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19480703 chr17:19480703 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105625 0 0 0 0 0 Nucleus 0 0.438644955131026 0.999635219573974 0 hPsi_site_4585 iPseU_CNN:0.999635219573974;iRNA_PseU:0 4586 chr16 2817055 2817055 1 + C T SKCM 2817055 + 2817035 2817075 41 GAACATCTGTGCCAGAAAATCATGCTCAGTCCAGGATTGCA GAACATCTGTGCCAGAAAATTATGCTCAGTCCAGGATTGCA Direct Gain 0 0.952922178410672 0 0.141445875167847 prediction 0.905844356821343 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2817055 chr16:2817055 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_105626 0 0 1 0 0 Nucleus 0 0.543925646733789 0 0.0878512934675781 hPsi_site_4586 iPseU_CNN:0;iRNA_PseU:0.0878512934675781 4587 chr1 196642261 196642261 1 + G A SKCM 196642261 - 196642241 196642281 41 TTAATGGATTAAGAGCAACCCATTCTCCCTTCCTGCATACC TTAATGGATTAAGAGCAACCTATTCTCCCTTCCTGCATACC Direct Gain 0 0.952919224410313 0 0.783482134342194 prediction 0.905838448820625 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196642261 chr1:196642261 stopgain 0.111 0 21 hPsi_associated_SNPs_105627 0 0 0 0 0 chromatin 0 0.438718595304437 0.566964268684388 0 hPsi_site_4587 iPseU_CNN:0.566964268684388;iRNA_PseU:0 4588 chr20 32664926 32664926 1 + G A rs2281209 32664926 - 32664906 32664946 41 GGCTGGTGGCCGGCTGCTGCCACCGCCACCGCCACCACCAC GGCTGGTGGCCGGCTGCTGCTACCGCCACCGCCACCACCAC Direct Gain 0 0.952917910523082 0 0.869107842445374 prediction 0.905835821046163 Functional Gain - RALY ENSG00000125970 CDS Human protein_coding chr20:32664926 chr20:32664926 nonsynonymous SNV 0.005 1 21 hPsi_associated_SNPs_105628 0 0 0 0 0 Cytosol 0 0.438715727839288 0.738215684890748 0 hPsi_site_4588 iPseU_CNN:0.738215684890748;iRNA_PseU:0 4589 chr3 89259547 89259547 1 + G T LUSC 89259547 + 89259527 89259567 41 TGGAGGTTAGAGGGTCTTGTGTCAACAATTCTAAGGAGGAA TGGAGGTTAGAGGGTCTTGTTTCAACAATTCTAAGGAGGAA Direct Gain 0 0.952912767175733 0 0.997627139091492 prediction 0.905825534351465 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89259547 chr3:89259547 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105629 0 0 0 0 0 Ribosome 0 0.438721653895324 0.995254278182984 0 hPsi_site_4589 iPseU_CNN:0.995254278182984;iRNA_PseU:0 4590 chr3 179294684 179294684 1 + C T COAD 179294684 + 179294664 179294704 41 CTCAGGTTACGAGGTCTTGGCACAATTATATGTGTAATGTA CTCAGGTTACGAGGTCTTGGTACAATTATATGTGTAATGTA Direct Gain 0 0.952911674544786 0 0.843247175216675 prediction 0.905823349089571 Functional Gain - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179294684 chr3:179294684 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105630 0 0 1 0 2 Ribosome 0 0.438716269822222 0.68649435043335 0 hPsi_site_4590 iPseU_CNN:0.68649435043335;iRNA_PseU:0 4591 chr22 29138168 29138168 1 + G T BLCA 29138168 + 29138148 29138188 41 GAAGGAGACCGCTAAGCTGCGATGCTGCGTCGCAGGCGGGA GAAGGAGACCGCTAAGCTGCTATGCTGCGTCGCAGGCGGGA Direct Gain 0 0.952911223622218 0 0.99636447429657 prediction 0.905822447244435 Functional Gain - HSCB ENSG00000100209 CDS Human protein_coding chr22:29138168 chr22:29138168 nonsynonymous SNV 0.047 1 21 hPsi_associated_SNPs_105631 0 0 1 0 0 Ribosome 0 0.438909458188973 0.99272894859314 0 hPsi_site_4591 iPseU_CNN:0.99272894859314;iRNA_PseU:0 4592 chr16 31382953 31382953 1 + G A HNSC 31382953 - 31382933 31382973 41 GGTCACAGAGCTTTGGAGGTCACCTGTAGGCGGTCGCAGGG GGTCACAGAGCTTTGGAGGTTACCTGTAGGCGGTCGCAGGG Direct Gain 0 0.952910890898128 0 0.0618812739849091 prediction 0.905821781796257 Functional Gain - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31382953 chr16:31382953 nonsynonymous SNV 0.120 0 21 hPsi_associated_SNPs_105632 0 0 0 0 0 Nucleus 0 0.420437079434558 0 0 hPsi_site_4592 iPseU_CNN:0;iRNA_PseU:0 4593 chr2 27280235 27280235 1 + G A BLCA 27280235 - 27280215 27280255 41 GGGGCTGGCACGCCCATTGTCATGGCAGGCAGCAGGGATGC GGGGCTGGCACGCCCATTGTTATGGCAGGCAGCAGGGATGC Direct Gain 0 0.952906270519579 0 0.996822595596313 prediction 0.905812541039157 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280235 chr2:27280235 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105633 0 0 1 0 0 Cytosol 0 0.438713156286494 0.993645191192626 0 hPsi_site_4593 iPseU_CNN:0.993645191192626;iRNA_PseU:0 4594 chr7 100459398 100459398 1 + C A BRCA 100459398 - 100459378 100459418 41 GGGCCGCCAGAACTTCACGTGATCCTTCCGGACGTCCAGCC GGGCCGCCAGAACTTCACGTTATCCTTCCGGACGTCCAGCC Direct Gain 0 0.952902689111428 0 0.999963402748108 prediction 0.905805378222855 Functional Gain - SLC12A9 ENSG00000146828 CDS Human protein_coding chr7:100459398 chr7:100459398 nonsynonymous SNV 0.987 5 21 hPsi_associated_SNPs_105634 0 0 0 0 0 Cytosol 0 0.438718592912371 0.999926805496216 0 hPsi_site_4594 iPseU_CNN:0.999926805496216;iRNA_PseU:0 4595 chr19 36430720 36430720 1 + C T BLCA 36430720 + 36430700 36430740 41 GGCCAGCTGCGCGGCCTGGTCAACTTGCGCCACCTCATCCT GGCCAGCTGCGCGGCCTGGTTAACTTGCGCCACCTCATCCT Direct Gain 0 0.952899938166782 0 0.99999988079071 prediction 0.905799876333565 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430720 chr19:36430720 synonymous SNV . 0 21 hPsi_associated_SNPs_105635 0 0 0 0 0 nucleus 0 0.438718590728702 0.99999976158142 0 hPsi_site_4595 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4596 chr8 42401705 42401705 1 + G T COAD 42401705 + 42401685 42401725 41 GAAGCCACCAATGTTTACTTGATAGTTATCCTTGTTAGCTT GAAGCCACCAATGTTTACTTTATAGTTATCCTTGTTAGCTT Direct Gain 0 0.952893496648628 0 0.338134467601776 prediction 0.905786993297256 Functional Gain - SMIM19 ENSG00000176209 CDS Human protein_coding chr8:42401705 chr8:42401705 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_105636 0 0 1 0 2 Ribosome 0 0.438718589310984 0 0 hPsi_site_4596 iPseU_CNN:0;iRNA_PseU:0 4597 chr9 84608319 84608319 1 + C T BLCA 84608319 + 84608299 84608339 41 GAAAAGTTGGGAACAACAAGCTCAGTCCCCATCCTTGATCG GAAAAGTTGGGAACAACAAGTTCAGTCCCCATCCTTGATCG Direct Gain 0 0.952890977730813 0 0.226902186870575 prediction 0.905781955461626 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84608319 chr9:84608319 synonymous SNV . 0 21 hPsi_associated_SNPs_105637 0 0 0 0 0 exosome 0 0.438718638916072 0 0 hPsi_site_4597 iPseU_CNN:0;iRNA_PseU:0 4598 chr4 183658121 183658121 1 + G A BLCA 183658121 - 183658101 183658141 41 GAAACCACTTTTGGAAGAGTCTTCCTACTACAGCTACCATA GAAACCACTTTTGGAAGAGTTTTCCTACTACAGCTACCATA Direct Gain 0 0.952889113203933 0 0.981091380119324 prediction 0.905778226407866 Functional Gain - TENM3 ENSG00000218336 CDS Human protein_coding chr4:183658121 chr4:183658121 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105638 0 0 0 0 0 nucleus 0 0.438718587778638 0.962182760238648 0 hPsi_site_4598 iPseU_CNN:0.962182760238648;iRNA_PseU:0 4599 chr15 34113731 34113731 1 + G A BLCA 34113731 - 34113711 34113751 41 GTCTCAACCACCATGGGGCTCATCTCACCTGCCATGGTGAA GTCTCAACCACCATGGGGCTTATCTCACCTGCCATGGTGAA Direct Gain 0 0.952886607322253 0 0.847047686576843 prediction 0.905773214644506 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:34113731 chr15:34113731 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105639 0 0 0 0 0 exosome 0 0.438718594899557 0.694095373153686 0 hPsi_site_4599 iPseU_CNN:0.694095373153686;iRNA_PseU:0 4600 chr1 196973882 196973882 1 + G A LUAD 196973882 - 196973862 196973902 41 AAGGACTGGCAACGGTACGTCACTGTTGACCCTGGAGGATA AAGGACTGGCAACGGTACGTTACTGTTGACCCTGGAGGATA Direct Gain 0 0.952883781031599 0 0.999964714050293 prediction 0.905767562063197 Functional Gain - CFHR5 ENSG00000134389 CDS Human protein_coding chr1:196973882 chr1:196973882 synonymous SNV . 0 21 hPsi_associated_SNPs_105640 0 0 0 0 0 exosome 0 0.438698808214 0.999929428100586 0 hPsi_site_4600 iPseU_CNN:0.999929428100586;iRNA_PseU:0 4601 chr5 55109520 55109520 1 + C T UCEC 55109520 + 55109500 55109540 41 GGGGATGAAAGAACTATGGTCTTTGTTGAAACTAAGAAAAA GGGGATGAAAGAACTATGGTTTTTGTTGAAACTAAGAAAAA Direct Gain 0 0.952878956668753 0 0.0580199956893921 prediction 0.905757913337505 Functional Gain - DDX4 ENSG00000152670 CDS Human protein_coding chr5:55109520 chr5:55109520 synonymous SNV . 0 21 hPsi_associated_SNPs_105641 0 0 0 0 2 unknown 0 0.438701458866808 0 0 hPsi_site_4601 iPseU_CNN:0;iRNA_PseU:0 4602 chr17 44374759 44374759 1 + G A UCEC 44374759 - 44374739 44374779 41 AGTGGGTTCTGGAATGATGGCAAGTCCCAGGTCTGGAGGCT AGTGGGTTCTGGAATGATGGTAAGTCCCAGGTCTGGAGGCT Direct Gain 0 0.952877459785711 0 0.962261497974396 prediction 0.905754919571421 Functional Gain - LRRC37A ENSG00000176681 CDS Human protein_coding chr17:44374759 chr17:44374759 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_105642 0 0 0 0 0 exosome 0 0.438718592995208 0.924522995948792 0 hPsi_site_4602 iPseU_CNN:0.924522995948792;iRNA_PseU:0 4603 chr9 5534953 5534953 1 + C T LGG 5534953 + 5534933 5534973 41 CTAGGGAAGGCCTCGTTCCACATACCTCAAGTCCAAGTGAG CTAGGGAAGGCCTCGTTCCATATACCTCAAGTCCAAGTGAG Direct Gain 0 0.952872695362955 0 0.994069397449493 prediction 0.905745390725911 Functional Gain - PDCD1LG2 ENSG00000197646 CDS Human protein_coding chr9:5534953 chr9:5534953 synonymous SNV . 0 21 hPsi_associated_SNPs_105643 0 0 0 0 1 exosome 0 0.438698153195509 0.988138794898986 0 hPsi_site_4603 iPseU_CNN:0.988138794898986;iRNA_PseU:0 4604 chr8 35579852 35579852 1 + C T SKCM 35579852 + 35579832 35579872 41 AGTGACTATGGCGTGGACGTCATTGACTCTTCTGCATTGAC AGTGACTATGGCGTGGACGTTATTGACTCTTCTGCATTGAC Direct Gain 0 0.952872675896337 0 0.50661689043045 prediction 0.905745351792674 Functional Gain - UNC5D ENSG00000156687 CDS Human protein_coding chr8:35579852 chr8:35579852 synonymous SNV . 0 21 hPsi_associated_SNPs_105644 0 0 0 0 1 chromatin 0 0.437704255984185 0.0132337808609 0 hPsi_site_4604 iPseU_CNN:0.0132337808609;iRNA_PseU:0 4605 chr3 133185782 133185782 1 + G A UCEC 133185782 - 133185762 133185802 41 AGGGCACGTAAGGATTCTGTCTCAGCCTGGAGGCTCTGGAC AGGGCACGTAAGGATTCTGTTTCAGCCTGGAGGCTCTGGAC Direct Gain 0 0.952862508554775 0 0.774642467498779 prediction 0.905725017109549 Functional Gain - BFSP2 ENSG00000170819 CDS Human protein_coding chr3:133185782 chr3:133185782 synonymous SNV . 0 21 hPsi_associated_SNPs_105645 0 0 0 0 0 exosome 0 0.438718592993381 0.549284934997558 0 hPsi_site_4605 iPseU_CNN:0.549284934997558;iRNA_PseU:0 4606 chr21 33039670 33039670 1 + C T BLCA 33039670 + 33039650 33039690 41 CTCTCAGGAGACCATTGCATCATTGGCCGCACACTGGTGGT CTCTCAGGAGACCATTGCATTATTGGCCGCACACTGGTGGT Direct Gain 0 0.952861228551626 0 0.0211540460586548 prediction 0.905722457103252 Functional Gain - SOD1 ENSG00000142168 CDS Human protein_coding chr21:33039670 chr21:33039670 synonymous SNV . 0 21 hPsi_associated_SNPs_105646 0 0 1 0 2 Ribosome 0 0.43860090345542 0 0 hPsi_site_4606 iPseU_CNN:0;iRNA_PseU:0 4607 chr7 100680667 100680667 1 + G A OV 100680667 - 100680647 100680687 41 ACCAGCGTGGTGCTGAGAGGCATACTTGTTAGTGGAGTGCT ACCAGCGTGGTGCTGAGAGGTATACTTGTTAGTGGAGTGCT Direct Gain 0 0.952860386173794 0 0.947756111621857 prediction 0.905720772347588 Functional Gain - MUC17 ENSG00000169876 CDS Human protein_coding chr7:100680667 chr7:100680667 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105647 0 0 0 0 0 exosome 0 0.43876119274652 0.895512223243714 0 hPsi_site_4607 iPseU_CNN:0.895512223243714;iRNA_PseU:0 4608 chr19 50434197 50434197 1 + C A rs12449 50434197 - 50434177 50434217 41 AGGGGGGCAGGGGCCGGGGGGAGTTTCCCATAGTCTACGAG AGGGGGGCAGGGGCCGGGGGTAGTTTCCCATAGTCTACGAG Direct Gain 0 0.952855427681755 0 0.991489112377167 prediction 0.905710855363509 Functional Gain - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50434197 chr19:50434197 synonymous SNV . 0 21 hPsi_associated_SNPs_105648 0 0 0 0 0 Cytosol 0 0.438718592995101 0.982978224754334 0 hPsi_site_4608 iPseU_CNN:0.982978224754334;iRNA_PseU:0 4609 chr12 54396309 54396309 1 + C A LAML 54396309 - 54396289 54396329 41 GGTTAAATACATATTGAAGAGAAACTCCTTCTCCAGTTCCA GGTTAAATACATATTGAAGATAAACTCCTTCTCCAGTTCCA Direct Gain 0 0.952848585121009 0 0.029388964176178 prediction 0.905697170242017 Functional Gain - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54396309 chr12:54396309 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105649 0 0 0 0 0 chromatin 0 0.438718501166762 0 0 hPsi_site_4609 iPseU_CNN:0;iRNA_PseU:0 4610 chr9 35750932 35750932 1 + G T HNSC 35750932 + 35750912 35750952 41 TGACCATTGGCTGCCAGCGTGTCAACTCCCCTATCACTTTA TGACCATTGGCTGCCAGCGTTTCAACTCCCCTATCACTTTA Direct Gain 0 0.952844625574575 0 0.399016946554184 prediction 0.905689251149151 Functional Gain - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35750932 chr9:35750932 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_105650 0 0 1 0 2 Cytosol 0 0.438718606785165 0 0 hPsi_site_4610 iPseU_CNN:0;iRNA_PseU:0 4611 chr6 32713147 32713147 1 + C T SKCM 32713147 + 32713127 32713167 41 GGAAAACACACCTTGGAATTCATGATGAGACAGTCCAACTC GGAAAACACACCTTGGAATTTATGATGAGACAGTCCAACTC Direct Gain 0 0.952841290815833 0 0.940829038619995 prediction 0.905682581631667 Functional Gain - HLA-DQA2 ENSG00000237541 CDS Human protein_coding chr6:32713147 chr6:32713147 synonymous SNV . 0 21 hPsi_associated_SNPs_105651 0 0 0 0 1 exosome 0 0.438709671502764 0.88165807723999 0 hPsi_site_4611 iPseU_CNN:0.88165807723999;iRNA_PseU:0 4612 chr6 160494870 160494870 1 + G A CESC 160494870 - 160494850 160494890 41 GGCATCATCCTCACTCTCATCATAAGCCTCATAACCACCAG GGCATCATCCTCACTCTCATTATAAGCCTCATAACCACCAG Direct Gain 0 0.95282149977497 0 0.999484777450562 prediction 0.905642999549941 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494870 chr6:160494870 nonsynonymous SNV 0.580 1 21 hPsi_associated_SNPs_105652 0 0 0 0 0 Endoplasmic reticulum 0 0.438715357636831 0.998969554901124 0 hPsi_site_4612 iPseU_CNN:0.998969554901124;iRNA_PseU:0 4613 chr3 148459124 148459124 1 + G A COAD 148459124 - 148459104 148459144 41 CGCTGGCTGAAGCAATCTTACATAGGTAATTGCCAAAGGGC CGCTGGCTGAAGCAATCTTATATAGGTAATTGCCAAAGGGC Direct Gain 0 0.952817669484458 0 0.992599844932556 prediction 0.905635338968916 Functional Gain - AGTR1 ENSG00000144891 CDS Human protein_coding chr3:148459124 chr3:148459124 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_105653 0 0 0 0 0 Endoplasmic reticulum 0 0.43871867873916 0.985199689865112 0 hPsi_site_4613 iPseU_CNN:0.985199689865112;iRNA_PseU:0 4614 chr12 123070231 123070231 1 + G T UCEC 123070231 + 123070211 123070251 41 ATGAAGAGTGGTCTTACAGTGACTTCTTCAGTGAAGATGGA ATGAAGAGTGGTCTTACAGTTACTTCTTCAGTGAAGATGGA Direct Gain 0 0.952817516657263 0 0.99977570772171 prediction 0.905635033314526 Functional Gain - KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123070231 chr12:123070231 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_105654 0 0 0 0 2 Nucleus 0 0.438704319356577 0.99955141544342 0 hPsi_site_4614 iPseU_CNN:0.99955141544342;iRNA_PseU:0 4615 chr2 264985 264985 1 + G A rs11691572 264985 - 264965 265005 41 AGACACACAAACAGCACGGACTTGGTAGCCTGTTCCGCCAT AGACACACAAACAGCACGGATTTGGTAGCCTGTTCCGCCAT Direct Gain 0 0.952809580542157 0 0.843125343322754 prediction 0.905619161084314 Functional Gain - ACP1 ENSG00000143727 CDS Human protein_coding chr2:264985 chr2:264985 synonymous SNV . 0 21 hPsi_associated_SNPs_105655 0 0 0 0 0 Ribosome 0 0.43871770527149 0.686250686645508 0 hPsi_site_4615 iPseU_CNN:0.686250686645508;iRNA_PseU:0 4616 chr8 28385340 28385340 1 + G A PAAD 28385340 - 28385320 28385360 41 ACACACGCCACTAATATTGTCACCTTCAATTTTATTCATCG ACACACGCCACTAATATTGTTACCTTCAATTTTATTCATCG Direct Gain 0 0.952798105294881 0 0.991782546043396 prediction 0.905596210589763 Functional Gain - FZD3 ENSG00000104290 CDS Human protein_coding chr8:28385340 chr8:28385340 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105656 0 0 0 0 0 Ribosome 0 0.43828055619354 0.983565092086792 0 hPsi_site_4616 iPseU_CNN:0.983565092086792;iRNA_PseU:0 4617 chr1 172425623 172425623 1 + G A SKCM 172425623 - 172425603 172425643 41 TCCCCCTTGCCTACCATTTTCATTTCTTGACATGTGGAGCA TCCCCCTTGCCTACCATTTTTATTTCTTGACATGTGGAGCA Direct Gain 0 0.952796743258378 0 0.995367228984833 prediction 0.905593486516756 Functional Gain - C1orf105 ENSG00000180999 CDS Human protein_coding chr1:172425623 chr1:172425623 nonsynonymous SNV 0.011 0 21 hPsi_associated_SNPs_105657 0 0 0 0 0 chromatin 0 0.438356018255511 0.990734457969666 0 hPsi_site_4617 iPseU_CNN:0.990734457969666;iRNA_PseU:0 4618 chr4 57860643 57860643 1 + C T BLCA 57860643 + 57860623 57860663 41 GGAAAGAGATGGTGCTCCTTCACCAATGATGCCCAATGAAG GGAAAGAGATGGTGCTCCTTTACCAATGATGCCCAATGAAG Direct Gain 0 0.952796548233247 0 0.686757683753967 prediction 0.905593096466494 Functional Gain - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57860643 chr4:57860643 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105658 0 0 1 0 2 Nucleus 0 0.438718406221416 0.373515367507934 0 hPsi_site_4618 iPseU_CNN:0.373515367507934;iRNA_PseU:0 4619 chr12 50453726 50453726 1 + G A BLCA 50453726 - 50453706 50453746 41 GGGACTCACCACCTTGAAGTCTTCAGCGCTGCAGACCTCCC GGGACTCACCACCTTGAAGTTTTCAGCGCTGCAGACCTCCC Direct Gain 0 0.95279482247238 0 0.999892473220825 prediction 0.905589644944759 Functional Gain - ASIC1 ENSG00000110881 CDS Human protein_coding chr12:50453726 chr12:50453726 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105659 0 0 0 0 0 exosome 0 0.438735760837656 0.99978494644165 0 hPsi_site_4619 iPseU_CNN:0.99978494644165;iRNA_PseU:0 4620 chr10 98064410 98064410 1 + C T BLCA 98064410 + 98064390 98064430 41 ACCACCCGCAGAGCGTTCCTCATGGAGCTGGCCCGCAGGAA ACCACCCGCAGAGCGTTCCTTATGGAGCTGGCCCGCAGGAA Direct Gain 0 0.952784127672998 0 0.993577480316162 prediction 0.905568255345995 Functional Gain - DNTT ENSG00000107447 CDS Human protein_coding chr10:98064410 chr10:98064410 synonymous SNV . 0 21 hPsi_associated_SNPs_105660 0 0 0 0 1 exosome 0 0.438806796501912 0.987154960632324 0 hPsi_site_4620 iPseU_CNN:0.987154960632324;iRNA_PseU:0 4621 chr22 37425383 37425383 1 + C T SKCM 37425383 + 37425363 37425403 41 GGAGAAGAAAGTGGACCTGTCTAAGCCACTGGTGGCCACGT GGAGAAGAAAGTGGACCTGTTTAAGCCACTGGTGGCCACGT Direct Gain 0 0.952781959550122 0 0.997565269470215 prediction 0.905563919100244 Functional Gain - MPST ENSG00000128309 CDS Human protein_coding chr22:37425383 chr22:37425383 nonsynonymous SNV 0.669 2 21 hPsi_associated_SNPs_105661 0 0 1 0 0 chromatin 0 0.43846697707505 0.99513053894043 0 hPsi_site_4621 iPseU_CNN:0.99513053894043;iRNA_PseU:0 4622 chr2 71909753 71909753 1 + C T UCEC 71909753 + 71909733 71909773 41 CGGTGGGCCATCATCCTCTTCATCATCCTCTTCATCCTGCT CGGTGGGCCATCATCCTCTTTATCATCCTCTTCATCCTGCT Direct Gain 0 0.952773100364058 0 0.377285540103912 prediction 0.905546200728115 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71909753 chr2:71909753 synonymous SNV . 0 21 hPsi_associated_SNPs_105662 0 0 0 0 2 Nucleus 0 0.438718656502291 0 0 hPsi_site_4622 iPseU_CNN:0;iRNA_PseU:0 4623 chr16 89630114 89630114 1 + C T rs111439133 89630114 + 89630094 89630134 41 CAAGTAGAGGGGTTTATAGGCACGAGACCCTGCACCCAACC CAAGTAGAGGGGTTTATAGGTACGAGACCCTGCACCCAACC Direct Gain 0 0.952767781017096 0 0.99999463558197 prediction 0.905535562034193 Functional Gain - RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630114 chr16:89630114 . . 0 21 hPsi_associated_SNPs_105663 0 0 1 0 0 Cytosol 0 0.438718592995102 0.99998927116394 0 hPsi_site_4623 iPseU_CNN:0.99998927116394;iRNA_PseU:0 4624 chr11 73008551 73008551 1 + G A rs144114236 73008551 - 73008531 73008571 41 GCTGCCCAGGACCTGGAGGACTCAGCGACCCTGCCTCTGCC GCTGCCCAGGACCTGGAGGATTCAGCGACCCTGCCTCTGCC Direct Gain 0 0.952765957378774 0 0.992712259292603 prediction 0.905531914757547 Functional Gain - P2RY6 ENSG00000171631 UTR3 Human protein_coding chr11:73008551 chr11:73008551 . . 0 21 hPsi_associated_SNPs_105664 0 0 0 0 0 exosome 0 0.43871826832561 0.985424518585206 0 hPsi_site_4624 iPseU_CNN:0.985424518585206;iRNA_PseU:0 4625 chr7 34182938 34182938 1 + C T UCEC 34182938 + 34182918 34182958 41 GCCTGCCAGAGAGAGGGCATCAAAGTCCACTGGGAGCCTCA GCCTGCCAGAGAGAGGGCATTAAAGTCCACTGGGAGCCTCA Direct Gain 0 0.952765098025778 0 0.990639567375183 prediction 0.905530196051556 Functional Gain - BMPER ENSG00000164619 CDS Human protein_coding chr7:34182938 chr7:34182938 synonymous SNV . 0 21 hPsi_associated_SNPs_105665 0 0 0 0 2 exosome 0 0.438659930611436 0.981279134750366 0 hPsi_site_4625 iPseU_CNN:0.981279134750366;iRNA_PseU:0 4626 chr9 5044449 5044449 1 + C A ESCA 5044449 - 5044429 5044469 41 ACCTCGAGATATTCCATGCCGATAGGCTCTGTTGCTGCCAC ACCTCGAGATATTCCATGCCTATAGGCTCTGTTGCTGCCAC Direct Gain 0 0.952763669051033 0 0.88865852355957 prediction 0.905527338102067 Functional Gain - JAK2 ENSG00000096968 CDS Human protein_coding chr9:5044449 chr9:5044449 synonymous SNV . 0 21 hPsi_associated_SNPs_105666 0 0 0 0 0 chromatin 0 0.438816720423746 0.77731704711914 0 hPsi_site_4626 iPseU_CNN:0.77731704711914;iRNA_PseU:0 4627 chr12 99076980 99076980 1 + C T BLCA 99076980 + 99076960 99077000 41 GATGAGCACTCAGAGCAAGTCAATTGCTGCCATTTCACCAA GATGAGCACTCAGAGCAAGTTAATTGCTGCCATTTCACCAA Direct Gain 0 0.952756381522678 0 0.99999737739563 prediction 0.905512763045357 Functional Gain - APAF1 ENSG00000120868 CDS Human protein_coding chr12:99076980 chr12:99076980 synonymous SNV . 0 21 hPsi_associated_SNPs_105667 0 0 1 0 2 Nucleus 0 0.439004191111974 0.99999475479126 0 hPsi_site_4627 iPseU_CNN:0.99999475479126;iRNA_PseU:0 4628 chr12 4835766 4835766 1 + G A LUAD 4835766 - 4835746 4835786 41 CTTTAGAAGAGGGCGTACTTCATCTTTCGCCCTCTTCAGTG CTTTAGAAGAGGGCGTACTTTATCTTTCGCCCTCTTCAGTG Direct Gain 0 0.952754754835372 0 0.0527944266796112 prediction 0.905509509670744 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4835766 chr12:4835766 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_105668 0 0 0 0 0 cytosol 0 0.438718602735807 0 0 hPsi_site_4628 iPseU_CNN:0;iRNA_PseU:0 4629 chr19 30935849 30935849 1 + G A SKCM 30935849 - 30935829 30935869 41 CCCAGCGCTTCCTTCTCCTTCATGGGCAGCTCGCCCTTGCC CCCAGCGCTTCCTTCTCCTTTATGGGCAGCTCGCCCTTGCC Direct Gain 0 0.952753411766889 0 0.989502906799316 prediction 0.905506823533779 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935849 chr19:30935849 nonsynonymous SNV 0.132 0 21 hPsi_associated_SNPs_105669 0 0 0 0 0 exosome 0 0.438718592995099 0.979005813598632 0 hPsi_site_4629 iPseU_CNN:0.979005813598632;iRNA_PseU:0 4630 chr1 201798340 201798340 1 + G A MESO 201798340 - 201798320 201798360 41 CCAGCTGCCGCCGCCGCCGCCATCTTTTCTCCCCTCAGCCC CCAGCTGCCGCCGCCGCCGCTATCTTTTCTCCCCTCAGCCC Direct Gain 0 0.952750522319122 0 0.976815342903137 prediction 0.905501044638244 Functional Gain - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201798340 chr1:201798340 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105670 0 0 0 0 0 Nucleus 0 0.438718733312852 0.953630685806274 0 hPsi_site_4630 iPseU_CNN:0.953630685806274;iRNA_PseU:0 4631 chr16 1552107 1552107 1 + C T rs58099766 1552107 + 1552087 1552127 41 AGAGCTGAAGAGCAGCAAGGCTCCTGCCTACGTCCGGGACT AGAGCTGAAGAGCAGCAAGGTTCCTGCCTACGTCCGGGACT Direct Gain 0 0.952748904349449 0 0.935331046581268 prediction 0.905497808698898 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1552107 chr16:1552107 nonsynonymous SNV 0.489 0 21 hPsi_associated_SNPs_105671 0 0 1 0 2 Cytosol 0 0.438716542258116 0.870662093162536 0 hPsi_site_4631 iPseU_CNN:0.870662093162536;iRNA_PseU:0 4632 chr8 99044506 99044506 1 + C A SARC 99044506 - 99044486 99044526 41 TTTTGGCAGTTCCCCTGCTGGAGAGTCCTGTCTTCCATCGG TTTTGGCAGTTCCCCTGCTGTAGAGTCCTGTCTTCCATCGG Direct Gain 0 0.952746579690278 0 0.999786615371704 prediction 0.905493159380556 Functional Gain - MATN2 ENSG00000132561 CDS Human protein_coding chr8:99044506 chr8:99044506 nonsynonymous SNV 0.922 0 21 hPsi_associated_SNPs_105672 0 0 0 0 0 Cytosol 0 0.438719532331592 0.999573230743408 0 hPsi_site_4632 iPseU_CNN:0.999573230743408;iRNA_PseU:0 4633 chr1 228412228 228412228 1 + G A rs1757153 228412228 - 228412208 228412248 41 CACCTCGCAGCTCAGTGTGGCACTGGCTCCTGCCTCTGCCT CACCTCGCAGCTCAGTGTGGTACTGGCTCCTGCCTCTGCCT Direct Gain 0 0.952740371502991 0 0.999748706817627 prediction 0.905480743005981 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228412228 chr1:228412228 nonsynonymous SNV 0.131 1 21 hPsi_associated_SNPs_105673 0 0 0 0 0 Ribosome 0 0.438348779002046 0.999497413635254 0 hPsi_site_4633 iPseU_CNN:0.999497413635254;iRNA_PseU:0 4634 chr19 11417406 11417406 1 + G A LUAD 11417406 - 11417386 11417426 41 GTGGATGACGTTTGGAGACACATCGCGTCCGTCACAGGACA GTGGATGACGTTTGGAGACATATCGCGTCCGTCACAGGACA Direct Gain 0 0.952740033776243 0 0.000206589698791504 prediction 0.905480067552485 Functional Gain - TSPAN16 ENSG00000130167 CDS Human protein_coding chr19:11417406 chr19:11417406 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105674 0 0 0 0 2 nucleus 0 0.4388636607481 0 0 hPsi_site_4634 iPseU_CNN:0;iRNA_PseU:0 4635 chr15 48537008 48537008 1 + G A SKCM 48537008 - 48536988 48537028 41 GCTGCTGAACCATTGCAGTTCATCCCAGAAATGATGGTGTC GCTGCTGAACCATTGCAGTTTATCCCAGAAATGATGGTGTC Direct Gain 0 0.952739635509826 0 0.994758605957031 prediction 0.905479271019653 Functional Gain - SLC12A1 ENSG00000074803 CDS Human protein_coding chr15:48537008 chr15:48537008 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105675 0 0 0 0 0 exosome 0 0.438700863423282 0.989517211914062 0 hPsi_site_4635 iPseU_CNN:0.989517211914062;iRNA_PseU:0 4636 chr19 44470534 44470534 1 + G T UCEC 44470534 + 44470514 44470554 41 GTGGGAAAGCCTTCATTCATGATTCACAGCTTCAAGAACAT GTGGGAAAGCCTTCATTCATTATTCACAGCTTCAAGAACAT Direct Gain 0 0.952738767671829 0 0.974845290184021 prediction 0.905477535343658 Functional Gain - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470534 chr19:44470534 nonsynonymous SNV 0.566 2 21 hPsi_associated_SNPs_105676 0 0 1 0 0 exosome 0 0.438451856893969 0.949690580368042 0 hPsi_site_4636 iPseU_CNN:0.949690580368042;iRNA_PseU:0 4637 chrX 35970007 35970007 1 + A T DLBC 35970007 + 35969987 35970027 41 ACATAGATACTACTATCATTATCTCCTGTCTTCCTAATGAA ACATAGATACTACTATCATTTTCTCCTGTCTTCCTAATGAA Direct Gain 0 0.952738426188035 0 0.989704251289368 prediction 0.90547685237607 Functional Gain - CFAP47 ENSG00000165164 CDS Human protein_coding chrX:35970007 chrX:35970007 nonsynonymous SNV 0.663 3 21 hPsi_associated_SNPs_105677 0 0 0 1 1 cytosol 0 0.438718516894801 0.979408502578736 0 hPsi_site_4637 iPseU_CNN:0.979408502578736;iRNA_PseU:0 4638 chr6 30139901 30139901 1 + C A UCEC 30139901 - 30139881 30139921 41 GCCCAGCACTGCTGGTGCGAGATGATCACGGCCCAGACGCC GCCCAGCACTGCTGGTGCGATATGATCACGGCCCAGACGCC Direct Gain 0 0.952734277223431 0 0.999985694885254 prediction 0.905468554446862 Functional Gain - TRIM15 ENSG00000204610 CDS Human protein_coding chr6:30139901 chr6:30139901 synonymous SNV . 0 21 hPsi_associated_SNPs_105678 0 0 0 0 0 Endoplasmic reticulum 0 0.438791757041828 0.999971389770508 0 hPsi_site_4638 iPseU_CNN:0.999971389770508;iRNA_PseU:0 4639 chr6 90604336 90604336 1 + C A UCEC 90604336 - 90604316 90604356 41 GGGTGTTGCAGGCAAATGCTGACTGTTCATCATCCCAGACA GGGTGTTGCAGGCAAATGCTTACTGTTCATCATCCCAGACA Direct Gain 0 0.952725656806502 0 0.998202681541443 prediction 0.905451313613003 Functional Gain - GJA10 ENSG00000135355 CDS Human protein_coding chr6:90604336 chr6:90604336 stopgain 0.998 0 21 hPsi_associated_SNPs_105679 0 0 0 0 0 unknown 0 0.438715264751026 0.996405363082886 0 hPsi_site_4639 iPseU_CNN:0.996405363082886;iRNA_PseU:0 4640 chr12 119942946 119942946 1 + C T SKCM 119942946 + 119942926 119942966 41 GGCGAGGCTCCACACTCAGTCTGAGTCGGGCCAGTGGGGGG GGCGAGGCTCCACACTCAGTTTGAGTCGGGCCAGTGGGGGG Direct Gain 0 0.95272540137969 0 0.999907314777374 prediction 0.90545080275938 Functional Gain - CCDC60 ENSG00000183273 CDS Human protein_coding chr12:119942946 chr12:119942946 synonymous SNV . 0 21 hPsi_associated_SNPs_105680 0 0 0 0 1 exosome 0 0.438718592996895 0.999814629554748 0 hPsi_site_4640 iPseU_CNN:0.999814629554748;iRNA_PseU:0 4641 chr14 20528695 20528695 1 + G T LUSC 20528695 + 20528675 20528715 41 AGCCAGATAGTTTTAACAATGAACTTGCCTTTCTGTGGCCA AGCCAGATAGTTTTAACAATTAACTTGCCTTTCTGTGGCCA Direct Gain 0 0.952719819913037 0 0.645280182361603 prediction 0.905439639826073 Functional Gain - OR4L1 ENSG00000176246 CDS Human protein_coding chr14:20528695 chr14:20528695 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_105681 0 0 0 0 0 unknown 0 0.438559648300057 0.290560364723206 0 hPsi_site_4641 iPseU_CNN:0.290560364723206;iRNA_PseU:0 4642 chr22 26736429 26736429 1 + G A LUAD 26736429 - 26736409 26736449 41 TCGTCGCCATCGTAGATGGTCAAGATGTCACTGTTGCTCAG TCGTCGCCATCGTAGATGGTTAAGATGTCACTGTTGCTCAG Direct Gain 0 0.952718175149512 0 0.981642723083496 prediction 0.905436350299024 Functional Gain - SEZ6L ENSG00000100095 CDS Human protein_coding chr22:26736429 chr22:26736429 synonymous SNV . 0 21 hPsi_associated_SNPs_105682 0 0 0 0 0 exosome 0 0.438864966538267 0.963285446166992 0 hPsi_site_4642 iPseU_CNN:0.963285446166992;iRNA_PseU:0 4643 chr11 5475079 5475079 1 + G A ESCA 5475079 - 5475059 5475099 41 ACAAATGGCCACATAGCGGTCAAAACTCATGGCCAGCAGAA ACAAATGGCCACATAGCGGTTAAAACTCATGGCCAGCAGAA Direct Gain 0 0.952716140361258 0 0.094391405582428 prediction 0.905432280722516 Functional Gain - OR51I2 ENSG00000187918 CDS Human protein_coding chr11:5475079 chr11:5475079 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_105683 0 0 0 0 0 nucleus 0 0.43871839863183 0 0 hPsi_site_4643 iPseU_CNN:0;iRNA_PseU:0 4644 chr20 37400343 37400343 1 + G A SARC 37400343 - 37400323 37400363 41 GGGGACATAGATGTTGGAAGCACAGTGCTCCTTGAGGTACT GGGGACATAGATGTTGGAAGTACAGTGCTCCTTGAGGTACT Direct Gain 0 0.952712456966417 0 0.907622635364532 prediction 0.905424913932834 Functional Gain - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37400343 chr20:37400343 nonsynonymous SNV 0.890 3 21 hPsi_associated_SNPs_105684 0 0 0 0 0 chromatin 0 0.438711832965037 0.815245270729064 0 hPsi_site_4644 iPseU_CNN:0.815245270729064;iRNA_PseU:0 4645 chr2 128910396 128910396 1 + C A GBM 128910396 - 128910376 128910416 41 ACAACATTTGGCTGATTCATGATATACTCTACCACATCTTG ACAACATTTGGCTGATTCATTATATACTCTACCACATCTTG Direct Gain 0 0.952711838459774 0 0.969901919364929 prediction 0.905423676919548 Functional Gain - UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128910396 chr2:128910396 synonymous SNV . 0 21 hPsi_associated_SNPs_105685 0 0 0 0 0 Nucleus 0 0.438203683206737 0.939803838729858 0 hPsi_site_4645 iPseU_CNN:0.939803838729858;iRNA_PseU:0 4646 chr2 172291128 172291128 1 + G A rs537657779 172291128 - 172291108 172291148 41 AGCAGCCCAGCGCCCGGCGACTCAGCCGGCTGCACACGTTG AGCAGCCCAGCGCCCGGCGATTCAGCCGGCTGCACACGTTG Direct Gain 0 0.952710735857997 0 0.935538470745087 prediction 0.905421471715994 Functional Gain - DCAF17 ENSG00000115827 CDS Human protein_coding chr2:172291128 chr2:172291128 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_105686 0 0 0 0 0 chromatin 0 0.43874480401215 0.871076941490174 0 hPsi_site_4646 iPseU_CNN:0.871076941490174;iRNA_PseU:0 4647 chr1 167962640 167962640 1 + G A UCEC 167962640 - 167962620 167962660 41 CGCAGAAGGAGTTTTAAGTTCTCGTGCTGTATCATCTTTCG CGCAGAAGGAGTTTTAAGTTTTCGTGCTGTATCATCTTTCG Direct Gain 0 0.952709313546079 0 0.58001720905304 prediction 0.905418627092158 Functional Gain - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:167962640 chr1:167962640 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105687 0 0 0 0 0 Cytosol 0 0.438777864669871 0.16003441810608 0 hPsi_site_4647 iPseU_CNN:0.16003441810608;iRNA_PseU:0 4648 chr2 27375610 27375610 1 + G A LUSC 27375610 - 27375590 27375630 41 GGTGCTGGCTGTGGTGGAGTCAAGATCGGAGTACCCCAGGC GGTGCTGGCTGTGGTGGAGTTAAGATCGGAGTACCCCAGGC Direct Gain 0 0.952705802659646 0 0.999804496765137 prediction 0.905411605319292 Functional Gain - TCF23 ENSG00000163792 CDS Human protein_coding chr2:27375610 chr2:27375610 nonsynonymous SNV 0.632 3 21 hPsi_associated_SNPs_105688 0 0 0 0 0 exosome 0 0.438718592995338 0.999608993530274 0 hPsi_site_4648 iPseU_CNN:0.999608993530274;iRNA_PseU:0 4649 chr1 156878777 156878777 1 + G A SKCM 156878777 - 156878757 156878797 41 TGAGCAGGCGATGGCATTTTCACATGAGCAGCGTGCAGAAC TGAGCAGGCGATGGCATTTTTACATGAGCAGCGTGCAGAAC Direct Gain 0 0.95269470942397 0 0.999992966651917 prediction 0.90538941884794 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156878777 chr1:156878777 nonsynonymous SNV 0.754 0 21 hPsi_associated_SNPs_105689 0 0 0 0 0 cytosol 0 0.439834008607134 0.999985933303834 0 hPsi_site_4649 iPseU_CNN:0.999985933303834;iRNA_PseU:0 4650 chr12 27877015 27877015 1 + G A GBM 27877015 - 27876995 27877035 41 ATGCTTCTCACATTTCTCGTCACTGTCCAGTGCGGCTGGCC ATGCTTCTCACATTTCTCGTTACTGTCCAGTGCGGCTGGCC Direct Gain 0 0.952690379858433 0 0.978555381298065 prediction 0.905380759716865 Functional Gain - MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27877015 chr12:27877015 nonsynonymous SNV 0.989 1 21 hPsi_associated_SNPs_105690 0 0 0 0 0 Ribosome 0 0.438864708281963 0.95711076259613 0 hPsi_site_4650 iPseU_CNN:0.95711076259613;iRNA_PseU:0 4651 chr16 46943685 46943685 1 + C T LUSC 46943685 + 46943665 46943705 41 TATCCCCTCTATTCAGCTGTCATCTCTGAGCTCGACGCCAT TATCCCCTCTATTCAGCTGTTATCTCTGAGCTCGACGCCAT Direct Gain 0 0.952677324896808 0 0.99578720331192 prediction 0.905354649793616 Functional Gain - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46943685 chr16:46943685 synonymous SNV . 0 21 hPsi_associated_SNPs_105691 0 0 1 0 1 Ribosome 0 0.438718446703438 0.99157440662384 0 hPsi_site_4651 iPseU_CNN:0.99157440662384;iRNA_PseU:0 4652 chr12 52404692 52404692 1 + T A OV 52404692 - 52404672 52404712 41 TCAAAGCCGAAGGTCTGGTTATCCTCCTTCTCCAACGTCAG TCAAAGCCGAAGGTCTGGTTTTCCTCCTTCTCCAACGTCAG Direct Gain 0 0.95267247838249 0 0.904167056083679 prediction 0.90534495676498 Functional Gain - GRASP ENSG00000161835 CDS Human protein_coding chr12:52404692 chr12:52404692 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_105692 0 0 0 0 0 exosome 0 0.438718592994813 0.808334112167358 0 hPsi_site_4652 iPseU_CNN:0.808334112167358;iRNA_PseU:0 4653 chr5 172590789 172590789 1 + C A rs148974577 172590789 - 172590769 172590809 41 ATAAGCTTCCGGCCCAGCTGGATGGTGCCCGACATGGACTT ATAAGCTTCCGGCCCAGCTGTATGGTGCCCGACATGGACTT Direct Gain 0 0.952660794014966 0 0.127994686365128 prediction 0.905321588029931 Functional Gain - BNIP1 ENSG00000113734 CDS Human protein_coding chr5:172590789 chr5:172590789 synonymous SNV . 0 21 hPsi_associated_SNPs_105693 0 0 0 0 0 Ribosome 0 0.43871836418307 0 0 hPsi_site_4653 iPseU_CNN:0;iRNA_PseU:0 4654 chr11 95555688 95555688 1 + C T BLCA 95555688 + 95555668 95555708 41 TTCTAGGAACTATTTTGGTGCACAACCACATTATAGATTAT TTCTAGGAACTATTTTGGTGTACAACCACATTATAGATTAT Direct Gain 0 0.952659208962899 0 0.611812710762024 prediction 0.905318417925798 Functional Gain - CEP57 ENSG00000166037 CDS Human protein_coding chr11:95555688 chr11:95555688 nonsynonymous SNV 0.349 0 21 hPsi_associated_SNPs_105694 0 0 1 1 2 Nucleus 0 0.436010598952241 0.223625421524048 0 hPsi_site_4654 iPseU_CNN:0.223625421524048;iRNA_PseU:0 4655 chr9 130263353 130263353 1 + G A BLCA 130263353 - 130263333 130263373 41 GCAGGGGGAGCGGATGGCCTCACAGACTCAGGAGGCTCCTG GCAGGGGGAGCGGATGGCCTTACAGACTCAGGAGGCTCCTG Direct Gain 0 0.952656368073472 0 0.999996066093445 prediction 0.905312736146943 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130263353 chr9:130263353 synonymous SNV . 0 21 hPsi_associated_SNPs_105695 0 0 0 0 0 chromatin 0 0.438718671670829 0.99999213218689 0 hPsi_site_4655 iPseU_CNN:0.99999213218689;iRNA_PseU:0 4656 chr1 67794051 67794051 1 + C T COAD 67794051 + 67794031 67794071 41 TCTTCACTTCCATCCACATTCACATTCTTGGACATAGGTAC TCTTCACTTCCATCCACATTTACATTCTTGGACATAGGTAC Direct Gain 0 0.952656331957338 0 0.961228787899017 prediction 0.905312663914675 Functional Gain - IL12RB2 ENSG00000081985 CDS Human protein_coding chr1:67794051 chr1:67794051 synonymous SNV . 0 21 hPsi_associated_SNPs_105696 0 0 0 0 1 cytosol 0 0.438925003594281 0.922457575798034 0 hPsi_site_4656 iPseU_CNN:0.922457575798034;iRNA_PseU:0 4657 chr1 113057617 113057617 1 + G A UCEC 113057617 - 113057597 113057637 41 CTGACACTCTCGGATCCATTCTCGGGCACCCTCGCCCACTG CTGACACTCTCGGATCCATTTTCGGGCACCCTCGCCCACTG Direct Gain 0 0.952656154931209 0 0.989658296108246 prediction 0.905312309862418 Functional Gain - WNT2B ENSG00000134245 CDS Human protein_coding chr1:113057617 chr1:113057617 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105697 0 0 0 0 0 chromatin 0 0.440848567250403 0.979316592216492 0 hPsi_site_4657 iPseU_CNN:0.979316592216492;iRNA_PseU:0 4658 chr5 36677035 36677035 1 + C A LUAD 36677035 - 36677015 36677055 41 ACAAGCGTTTCGTTGGCCTGGATGGGCACTTTAAAGCTTCT ACAAGCGTTTCGTTGGCCTGTATGGGCACTTTAAAGCTTCT Direct Gain 0 0.952655932351356 0 0.999839186668396 prediction 0.905311864702711 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36677035 chr5:36677035 synonymous SNV . 0 21 hPsi_associated_SNPs_105698 0 0 0 0 0 Endoplasmic reticulum 0 0.438718291959931 0.999678373336792 0 hPsi_site_4658 iPseU_CNN:0.999678373336792;iRNA_PseU:0 4659 chr1 28862474 28862474 1 + C T LUSC 28862474 + 28862454 28862494 41 GCCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGA GCCTTTTGTGGTGCCTATTTTACCTTTGCCATCTCCCATGA Direct Gain 0 0.952650508406951 0 0.996443629264832 prediction 0.905301016813903 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862474 chr1:28862474 synonymous SNV . 0 21 hPsi_associated_SNPs_105699 0 0 1 0 2 Ribosome 0 0.438718501973958 0.992887258529664 0 hPsi_site_4659 iPseU_CNN:0.992887258529664;iRNA_PseU:0 4660 chr20 47707327 47707327 1 + G A OV 47707327 - 47707307 47707347 41 AAGATAAAAACCTTGGTGGTCATTTGCTTTGGATGCAATCA AAGATAAAAACCTTGGTGGTTATTTGCTTTGGATGCAATCA Direct Gain 0 0.952648839170799 0 0.997177064418793 prediction 0.905297678341598 Functional Gain - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47707327 chr20:47707327 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_105700 0 0 0 0 0 Nucleus 0 0.438717073127883 0.994354128837586 0 hPsi_site_4660 iPseU_CNN:0.994354128837586;iRNA_PseU:0 4661 chr16 28895913 28895913 1 + G A UCEC 28895913 - 28895893 28895933 41 GGCGAGGATTCGGATGTCTGCAGGGACTTTGTCCCCCACTG GGCGAGGATTCGGATGTCTGTAGGGACTTTGTCCCCCACTG Direct Gain 0 0.952644709242263 0 0.999999523162842 prediction 0.905289418484526 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28895913 chr16:28895913 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105701 0 0 1 0 0 chromatin 0 0.438718648977957 0.999999046325684 0 hPsi_site_4661 iPseU_CNN:0.999999046325684;iRNA_PseU:0 4662 chr11 55340470 55340470 1 + T A SKCM 55340470 - 55340450 55340490 41 ATGGCACTTTTCACTTCTGTATTCTTCAGCGTGTAAATCAC ATGGCACTTTTCACTTCTGTTTTCTTCAGCGTGTAAATCAC Direct Gain 0 0.952639184552871 0 0.949544668197632 prediction 0.905278369105741 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55340470 chr11:55340470 nonsynonymous SNV 0.008 2 21 hPsi_associated_SNPs_105702 0 0 0 0 0 unknown 0 0.438721204560049 0.899089336395264 0 hPsi_site_4662 iPseU_CNN:0.899089336395264;iRNA_PseU:0 4663 chr8 56436207 56436207 1 + C T SKCM 56436207 + 56436187 56436227 41 AGGACACGCTGCAGGCTATTCATTTACTATTTTGTGATCCT AGGACACGCTGCAGGCTATTTATTTACTATTTTGTGATCCT Direct Gain 0 0.952631875125552 0 0.999736189842224 prediction 0.905263750251103 Functional Gain - XKR4 ENSG00000206579 CDS Human protein_coding chr8:56436207 chr8:56436207 synonymous SNV . 0 21 hPsi_associated_SNPs_105703 0 0 0 0 0 exosome 0 0.438830210038861 0.999472379684448 0 hPsi_site_4663 iPseU_CNN:0.999472379684448;iRNA_PseU:0 4664 chrX 49104112 49104112 1 + C T SKCM 49104112 + 49104092 49104132 41 CTGGCCTGGGCCTCCCAGGTCACGTGGGCAGCTCAGGAACA CTGGCCTGGGCCTCCCAGGTTACGTGGGCAGCTCAGGAACA Direct Gain 0 0.952624680008384 0 0.626588225364685 prediction 0.905249360016767 Functional Gain - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49104112 chrX:49104112 synonymous SNV . 0 21 hPsi_associated_SNPs_105704 0 0 1 0 1 Cytosol 0 0.438718593068517 0.25317645072937 0 hPsi_site_4664 iPseU_CNN:0.25317645072937;iRNA_PseU:0 4665 chr1 107973473 107973473 1 + G A SKCM 107973473 - 107973453 107973493 41 GTAGCCCAGCCTGCATAACTCACAGTGCTGCCCTCTAGTGT GTAGCCCAGCCTGCATAACTTACAGTGCTGCCCTCTAGTGT Direct Gain 0 0.952622076302813 0 0.999070644378662 prediction 0.905244152605625 Functional Gain - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107973473 chr1:107973473 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105705 0 0 0 0 0 exosome 0 0.438720886274775 0.998141288757324 0 hPsi_site_4665 iPseU_CNN:0.998141288757324;iRNA_PseU:0 4666 chr9 93659263 93659263 1 + C T rs138672587 93659263 + 93659243 93659283 41 AGGTCGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCTT AGGTCGCAGTGAGCCAAGATTATGCCACTGCACTCCAGCTT Direct Gain 0 0.952621994778427 0 0.969554364681244 prediction 0.905243989556855 Functional Gain - SYK ENSG00000165025 UTR3 Human protein_coding chr9:93659263 chr9:93659263 . . 0 21 hPsi_associated_SNPs_105706 0 0 0 0 0 Cytosol 0 0.431979814635471 0.939108729362488 0 hPsi_site_4666 iPseU_CNN:0.939108729362488;iRNA_PseU:0 4667 chr2 220073151 220073151 1 + C T SKCM 220073151 + 220073131 220073171 41 TTCAATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTG TTCAATGTCTGTCGTAGAGCTACAACCCGATCTCCGTCCTG Direct Gain 0 0.952621449085729 0 0.993636131286621 prediction 0.905242898171457 Functional Gain - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220073151 chr2:220073151 synonymous SNV . 0 21 hPsi_associated_SNPs_105707 0 0 1 1 2 Ribosome 0 0.438666385752397 0.987272262573242 0 hPsi_site_4667 iPseU_CNN:0.987272262573242;iRNA_PseU:0 4668 chr5 178369801 178369801 1 + C A HNSC 178369801 - 178369781 178369821 41 ACCATGGTTGGCAGGTGGCTGACAGCCATTCTTTCTTCTCC ACCATGGTTGGCAGGTGGCTTACAGCCATTCTTTCTTCTCC Direct Gain 0 0.95261832931005 0 0.99990850687027 prediction 0.905236658620099 Functional Gain - ZNF454 ENSG00000178187 CDS Human protein_coding chr5:178369801 chr5:178369801 synonymous SNV . 0 21 hPsi_associated_SNPs_105708 0 0 0 0 0 exosome 0 0.438704128870645 0.99981701374054 0 hPsi_site_4668 iPseU_CNN:0.99981701374054;iRNA_PseU:0 4669 chr17 74868960 74868960 1 + C T rs200892664 74868960 + 74868940 74868980 41 GTCCTGGGCATCGGCTTCTTCACTCTCTGCTTCCTGATGAC GTCCTGGGCATCGGCTTCTTTACTCTCTGCTTCCTGATGAC Direct Gain 0 0.952609204441101 0 0.998289227485657 prediction 0.905218408882202 Functional Gain - MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74868960 chr17:74868960 synonymous SNV . 0 21 hPsi_associated_SNPs_105709 0 0 0 0 2 exosome 0 0.438714102175467 0.996578454971314 0 hPsi_site_4669 iPseU_CNN:0.996578454971314;iRNA_PseU:0 4670 chr15 91447509 91447509 1 + C T rs2677743 91447509 + 91447489 91447529 41 GCAGTCTTCTCGCTCTACCTCATGCTGGACCGAGTGCAACA GCAGTCTTCTCGCTCTACCTTATGCTGGACCGAGTGCAACA Direct Gain 0 0.952608501893582 0 0.999013662338257 prediction 0.905217003787163 Functional Gain - MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91447509 chr15:91447509 synonymous SNV . 0 21 hPsi_associated_SNPs_105710 0 0 1 0 1 Endoplasmic reticulum 0 0.43880639886994 0.998027324676514 0 hPsi_site_4670 iPseU_CNN:0.998027324676514;iRNA_PseU:0 4671 chr19 48954335 48954335 1 + C T COAD 48954335 + 48954315 48954355 41 GCCTCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAA GCCTCCATCCGCATCTGGGATATCCGGGCAGCCCCCAGCAA Direct Gain 0 0.952589846738731 0 0.360571324825287 prediction 0.905179693477462 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48954335 chr19:48954335 synonymous SNV . 0 21 hPsi_associated_SNPs_105711 0 0 1 0 1 Ribosome 0 0.438718826786513 0 0 hPsi_site_4671 iPseU_CNN:0;iRNA_PseU:0 4672 chrX 105449843 105449843 1 + G A SKCM 105449843 - 105449823 105449863 41 CTCAAGACACCCTGGTAAGTCACCTTCATCCTTCCGGTATT CTCAAGACACCCTGGTAAGTTACCTTCATCCTTCCGGTATT Direct Gain 0 0.952588020717761 0 0.99999988079071 prediction 0.905176041435523 Functional Gain - MUM1L1 ENSG00000157502 CDS Human protein_coding chrX:105449843 chrX:105449843 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105712 0 0 0 0 0 exosome 0 0.438703258519199 0.99999976158142 0 hPsi_site_4672 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4673 chr6 136476860 136476860 1 + G A SKCM 136476860 - 136476840 136476880 41 AGATGGTGGTTAGTTTTTATCAAAAATGGCTGGTTCACCCC AGATGGTGGTTAGTTTTTATTAAAAATGGCTGGTTCACCCC Direct Gain 0 0.952586190869413 0 0.447490513324738 prediction 0.905172381738825 Functional Gain - PDE7B ENSG00000171408 CDS Human protein_coding chr6:136476860 chr6:136476860 synonymous SNV . 0 21 hPsi_associated_SNPs_105713 0 0 1 0 0 nucleoplasm 0 0.438718594290059 0 0 hPsi_site_4673 iPseU_CNN:0;iRNA_PseU:0 4674 chr1 117640030 117640030 1 + C A BLCA 117640030 - 117640010 117640050 41 CATGTCCAAAAGAAAGAGGTGATTTCCTCCAGTCAGGTTTA CATGTCCAAAAGAAAGAGGTTATTTCCTCCAGTCAGGTTTA Direct Gain 0 0.952579599185735 0 0.270996272563934 prediction 0.90515919837147 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117640030 chr1:117640030 nonsynonymous SNV 0.990 3 21 hPsi_associated_SNPs_105714 0 0 0 0 0 Nucleus 0 0.43871883066264 0 0 hPsi_site_4674 iPseU_CNN:0;iRNA_PseU:0 4675 chr17 57195361 57195361 1 + C T rs150398435 57195361 + 57195341 57195381 41 ACTGGCTGGACATGGTGGCTCACGCCTGTAATCCCAGCACT ACTGGCTGGACATGGTGGCTTACGCCTGTAATCCCAGCACT Direct Gain 0 0.952579076098199 0 0.999987781047821 prediction 0.905158152196398 Functional Gain - SKA2 ENSG00000224738 ncRNA_exonic Human antisense chr17:57195361 chr17:57195361 . . 0 21 hPsi_associated_SNPs_105715 0 0 0 0 1 Ribosome 0 0.438842086246174 0.999975562095642 0 hPsi_site_4675 iPseU_CNN:0.999975562095642;iRNA_PseU:0 4676 chr19 48343158 48343158 1 + C T SKCM 48343158 + 48343138 48343178 41 CCCACGGGCACCTGGAAATTCACCTACAATCCCATGGACCC CCCACGGGCACCTGGAAATTTACCTACAATCCCATGGACCC Direct Gain 0 0.952577489480038 0 0.998579680919647 prediction 0.905154978960077 Functional Gain - CRX ENSG00000105392 CDS Human protein_coding chr19:48343158 chr19:48343158 synonymous SNV . 0 21 hPsi_associated_SNPs_105716 0 0 0 0 0 Nucleus 0 0.438718592995101 0.997159361839294 0 hPsi_site_4676 iPseU_CNN:0.997159361839294;iRNA_PseU:0 4677 chr2 11052841 11052841 1 + G T THYM 11052841 + 11052821 11052861 41 TCGAGGTGTACTATTTCGGGGAGGTCCACATGAAGAAGGGC TCGAGGTGTACTATTTCGGGTAGGTCCACATGAAGAAGGGC Direct Gain 0 0.952576714014524 0 0.974287629127502 prediction 0.905153428029049 Functional Gain - KCNF1 ENSG00000162975 CDS Human protein_coding chr2:11052841 chr2:11052841 stopgain 1.000 1 21 hPsi_associated_SNPs_105717 0 0 0 0 0 exosome 0 0.438718593330962 0.948575258255004 0 hPsi_site_4677 iPseU_CNN:0.948575258255004;iRNA_PseU:0 4678 chr17 61621708 61621708 1 + G A SKCM 61621708 - 61621688 61621728 41 CAGAGGCCAGCAATCTGGGTCTTCCTGAGGGCTTTGGGGGC CAGAGGCCAGCAATCTGGGTTTTCCTGAGGGCTTTGGGGGC Direct Gain 0 0.952569670596689 0 0.967229247093201 prediction 0.905139341193378 Functional Gain - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61621708 chr17:61621708 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105718 0 0 0 0 0 unknown 0 0.438718592982859 0.934458494186402 0 hPsi_site_4678 iPseU_CNN:0.934458494186402;iRNA_PseU:0 4679 chr8 15508305 15508305 1 + G T LUSC 15508305 + 15508285 15508325 41 ATGGTGGACTATGATGAGGGGACAGACGTTTTTCAGCAGGT ATGGTGGACTATGATGAGGGTACAGACGTTTTTCAGCAGGT Direct Gain 0 0.952567603076388 0 0.971255779266357 prediction 0.905135206152775 Functional Gain - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15508305 chr8:15508305 synonymous SNV . 0 21 hPsi_associated_SNPs_105719 0 0 1 0 2 Endoplasmic reticulum 0 0.43867003450456 0.942511558532714 0 hPsi_site_4679 iPseU_CNN:0.942511558532714;iRNA_PseU:0 4680 chr11 66033414 66033414 1 + G A OV 66033414 - 66033394 66033434 41 CGAGGCCCGGCACCCCCAGCCATGTCTCGGCTGCTGCGGCG CGAGGCCCGGCACCCCCAGCTATGTCTCGGCTGCTGCGGCG Direct Gain 0 0.952567120963482 0 0.995986104011536 prediction 0.905134241926965 Functional Gain - KLC2 ENSG00000174996 CDS Human protein_coding chr11:66033414 chr11:66033414 nonsynonymous SNV 0.165 0 21 hPsi_associated_SNPs_105720 0 0 0 0 0 Ribosome 0 0.438718177145722 0.991972208023072 0 hPsi_site_4680 iPseU_CNN:0.991972208023072;iRNA_PseU:0 4681 chr20 25398806 25398806 1 + T A COAD 25398806 - 25398786 25398826 41 CAGCAGCCATGTGAAATCGTAATGCATTTGGCAAGACGCTA CAGCAGCCATGTGAAATCGTTATGCATTTGGCAAGACGCTA Direct Gain 0 0.952561578813121 0 0.971830368041992 prediction 0.905123157626242 Functional Gain - GINS1 ENSG00000101003 CDS Human protein_coding chr20:25398806 chr20:25398806 stopgain 0.480 0 21 hPsi_associated_SNPs_105721 0 0 0 0 0 Ribosome 0 0.438563437635235 0.943660736083984 0 hPsi_site_4681 iPseU_CNN:0.943660736083984;iRNA_PseU:0 4682 chr14 20404125 20404125 1 + G T LUSC 20404125 + 20404105 20404145 41 TTTGAGGGTTGCATGGCCCAGATATTCGTTCTTCACAGTTT TTTGAGGGTTGCATGGCCCATATATTCGTTCTTCACAGTTT Direct Gain 0 0.952556045584355 0 0.879183292388916 prediction 0.905112091168709 Functional Gain - OR4K1 ENSG00000155249 CDS Human protein_coding chr14:20404125 chr14:20404125 nonsynonymous SNV 0.973 2 21 hPsi_associated_SNPs_105722 0 0 0 0 0 unknown 0 0.438718654905141 0.758366584777832 0 hPsi_site_4682 iPseU_CNN:0.758366584777832;iRNA_PseU:0 4683 chr1 175067715 175067715 1 + C A LUSC 175067715 - 175067695 175067735 41 TTACCTGTCTGGGCCTTGGTGTCGGCCTTCTTGCTCTCCTG TTACCTGTCTGGGCCTTGGTTTCGGCCTTCTTGCTCTCCTG Direct Gain 0 0.952555167253108 0 0.999335527420044 prediction 0.905110334506215 Functional Gain - TNN ENSG00000120332 CDS Human protein_coding chr1:175067715 chr1:175067715 nonsynonymous SNV 0.665 1 21 hPsi_associated_SNPs_105723 0 0 0 0 0 exosome 0 0.438718592954017 0.998671054840088 0 hPsi_site_4683 iPseU_CNN:0.998671054840088;iRNA_PseU:0 4684 chr11 34130304 34130304 1 + C T LUSC 34130304 + 34130284 34130324 41 GGCAGGTGGTAATACTTCATCACATGTTATCCAAAGCAACT GGCAGGTGGTAATACTTCATTACATGTTATCCAAAGCAACT Direct Gain 0 0.952553180269971 0 0.137029260396957 prediction 0.905106360539943 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34130304 chr11:34130304 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105724 0 0 1 0 2 chromatin 0 0.43864544800274 0 0 hPsi_site_4684 iPseU_CNN:0;iRNA_PseU:0 4685 chr17 66339772 66339772 1 + C T SKCM 66339772 + 66339752 66339792 41 GATTTCCATGCAGCTGCCTCCACCTGCTCACCCTCCCGGGC GATTTCCATGCAGCTGCCTCTACCTGCTCACCCTCCCGGGC Direct Gain 0 0.952547950833516 0 0.90834641456604 prediction 0.905095901667032 Functional Gain - ARSG ENSG00000141337 CDS Human protein_coding chr17:66339772 chr17:66339772 synonymous SNV . 0 21 hPsi_associated_SNPs_105725 0 0 1 0 1 chromatin 0 0.438693646179327 0.81669282913208 0 hPsi_site_4685 iPseU_CNN:0.81669282913208;iRNA_PseU:0 4686 chr2 190708723 190708723 1 + C T UCEC 190708723 + 190708703 190708743 41 AGAAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCA AGAAAAGCAGAGTATCAGATTACAAGATGGCTCTCATGTCA Direct Gain 0 0.952543594740538 0 0.948608577251434 prediction 0.905087189481075 Functional Gain - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190708723 chr2:190708723 nonsynonymous SNV 0.970 1 21 hPsi_associated_SNPs_105726 0 0 1 0 1 Nucleus 0 0.438728122455435 0.897217154502868 0 hPsi_site_4686 iPseU_CNN:0.897217154502868;iRNA_PseU:0 4687 chr11 32459419 32459419 1 + G A rs573378706 32459419 - 32459399 32459439 41 CCCCGGGGTTCGCACCGGTGCTCTTCCCCTCCCCGCCCCCA CCCCGGGGTTCGCACCGGTGTTCTTCCCCTCCCCGCCCCCA Direct Gain 0 0.952543291038646 0 0.749374508857727 prediction 0.905086582077293 Functional Gain - WT1-AS ENSG00000183242 ncRNA_exonic Human antisense chr11:32459419 chr11:32459419 . . 0 21 hPsi_associated_SNPs_105727 0 0 0 0 0 unknown 0 0.438718593149616 0.498749017715454 0 hPsi_site_4687 iPseU_CNN:0.498749017715454;iRNA_PseU:0 4688 chr14 93107640 93107640 1 + C A LIHC 93107640 - 93107620 93107660 41 GCGATGGTCTCAAGGTCCGTGAAGCTGCTGGCCTCAAGGAT GCGATGGTCTCAAGGTCCGTTAAGCTGCTGGCCTCAAGGAT Direct Gain 0 0.952541243161374 0 0.903068482875824 prediction 0.905082486322748 Functional Gain - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93107640 chr14:93107640 stopgain 0.160 0 21 hPsi_associated_SNPs_105728 0 0 0 0 0 cytosol 0 0.43871007837427 0.806136965751648 0 hPsi_site_4688 iPseU_CNN:0.806136965751648;iRNA_PseU:0 4689 chr1 4832517 4832517 1 + G A UCEC 4832517 - 4832497 4832537 41 GTCTCATCGGTGTACACGGGCACAGATGCCCTGACGCACTC GTCTCATCGGTGTACACGGGTACAGATGCCCTGACGCACTC Direct Gain 0 0.952540747828553 0 0.992884695529938 prediction 0.905081495657107 Functional Gain - AJAP1 ENSG00000196581 CDS Human protein_coding chr1:4832517 chr1:4832517 synonymous SNV . 0 21 hPsi_associated_SNPs_105729 0 0 0 0 0 exosome 0 0.438718006490486 0.985769391059876 0 hPsi_site_4689 iPseU_CNN:0.985769391059876;iRNA_PseU:0 4690 chr3 140284901 140284901 1 + G A SKCM 140284901 - 140284881 140284921 41 TTCCCCATGCCCTGGTCCTTCATGTTTCTGGATATCAAGGA TTCCCCATGCCCTGGTCCTTTATGTTTCTGGATATCAAGGA Direct Gain 0 0.952539212498158 0 0.0219494104385376 prediction 0.905078424996316 Functional Gain - CLSTN2 ENSG00000158258 CDS Human protein_coding chr3:140284901 chr3:140284901 nonsynonymous SNV 0.977 1 21 hPsi_associated_SNPs_105730 0 0 0 0 0 exosome 0 0.438718588869333 0 0 hPsi_site_4690 iPseU_CNN:0;iRNA_PseU:0 4691 chrX 85994870 85994870 1 + C A HNSC 85994870 - 85994850 85994890 41 CTCACCCATTCTTTCCAAATGATGATCCATCTGAGAGGGAG CTCACCCATTCTTTCCAAATTATGATCCATCTGAGAGGGAG Direct Gain 0 0.952529360226514 0 0.896423757076263 prediction 0.905058720453027 Functional Gain - DACH2 ENSG00000126733 CDS Human protein_coding chrX:85994870 chrX:85994870 nonsynonymous SNV 0.985 1 21 hPsi_associated_SNPs_105731 0 0 0 0 0 exosome 0 0.4387200059932 0.792847514152526 0 hPsi_site_4691 iPseU_CNN:0.792847514152526;iRNA_PseU:0 4692 chr10 123845639 123845639 1 + G A SKCM 123845639 - 123845619 123845659 41 GCCTGGTGTGTAGAAAAATCCATGGTGCTCCTGGGAATCCC GCCTGGTGTGTAGAAAAATCTATGGTGCTCCTGGGAATCCC Direct Gain 0 0.952525993131473 0 0.852244853973389 prediction 0.905051986262947 Functional Gain - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123845639 chr10:123845639 nonsynonymous SNV 0.027 0 21 hPsi_associated_SNPs_105732 0 0 0 0 0 Cytoplasm 0 0.43871859303316 0.704489707946778 0 hPsi_site_4692 iPseU_CNN:0.704489707946778;iRNA_PseU:0 4693 chr12 102061526 102061526 1 + T A UCEC 102061526 - 102061506 102061546 41 TCAATCAGATCTTTGTTTGCAACTATCCAGTCCTCAGCTGA TCAATCAGATCTTTGTTTGCTACTATCCAGTCCTCAGCTGA Direct Gain 0 0.952525551384596 0 0.999906182289124 prediction 0.905051102769192 Functional Gain - MYBPC1 ENSG00000196091 CDS Human protein_coding chr12:102061526 chr12:102061526 synonymous SNV . 0 21 hPsi_associated_SNPs_105733 0 0 0 0 0 nucleus 0 0.438881399389739 0.999812364578248 0 hPsi_site_4693 iPseU_CNN:0.999812364578248;iRNA_PseU:0 4694 chr4 144336813 144336813 1 + G T COAD 144336813 + 144336793 144336833 41 TTGAAAACAGCTACATTTTTGATATCAACACTATTGACCGG TTGAAAACAGCTACATTTTTTATATCAACACTATTGACCGG Direct Gain 0 0.952522294707376 0 0.328790783882141 prediction 0.905044589414752 Functional Gain - GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336813 chr4:144336813 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105734 0 0 1 0 0 chromatin 0 0.438718573722047 0 0 hPsi_site_4694 iPseU_CNN:0;iRNA_PseU:0 4695 chr20 17950725 17950725 1 + G A BLCA 17950725 - 17950705 17950745 41 GGGTCCACAGAGCAAAGCATCTTCCTCCACCGATCCCGGGG GGGTCCACAGAGCAAAGCATTTTCCTCCACCGATCCCGGGG Direct Gain 0 0.952518887597301 0 0.988843202590942 prediction 0.905037775194603 Functional Gain - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950725 chr20:17950725 nonsynonymous SNV 0.209 4 21 hPsi_associated_SNPs_105735 0 0 0 0 0 chromatin 0 0.438718541966079 0.977686405181884 0 hPsi_site_4695 iPseU_CNN:0.977686405181884;iRNA_PseU:0 4696 chr9 6893118 6893118 1 + C T BLCA 6893118 + 6893098 6893138 41 ACCCAGGAGGCTGGAGAATTCATGATCACTTTCCCATATGG ACCCAGGAGGCTGGAGAATTTATGATCACTTTCCCATATGG Direct Gain 0 0.952517654058943 0 0.998988091945648 prediction 0.905035308117886 Functional Gain - KDM4C ENSG00000107077 CDS Human protein_coding chr9:6893118 chr9:6893118 synonymous SNV . 0 21 hPsi_associated_SNPs_105736 0 0 1 0 1 Nucleus 0 0.438718501040849 0.997976183891296 0 hPsi_site_4696 iPseU_CNN:0.997976183891296;iRNA_PseU:0 4697 chr11 47289880 47289880 1 + G A STAD 47289880 - 47289860 47289900 41 ATGGTGGATGGAGACGTAGGCATGCAGGGCTTCCACATATG ATGGTGGATGGAGACGTAGGTATGCAGGGCTTCCACATATG Direct Gain 0 0.952513364065674 0 0.999739050865173 prediction 0.905026728131348 Functional Gain - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47289880 chr11:47289880 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105737 0 0 0 0 0 Ribosome 0 0.438718556502805 0.999478101730346 0 hPsi_site_4697 iPseU_CNN:0.999478101730346;iRNA_PseU:0 4698 chr19 860975 860975 1 + C T UCEC 860975 + 860955 860995 41 CACCCGGACAGCCAGCCCGACACCATCGACCACGACCTCCT CACCCGGACAGCCAGCCCGATACCATCGACCACGACCTCCT Direct Gain 0 0.952508401146294 0 0.994823515415192 prediction 0.905016802292588 Functional Gain - CFD ENSG00000197766 CDS Human protein_coding chr19:860975 chr19:860975 synonymous SNV . 0 21 hPsi_associated_SNPs_105738 0 0 0 0 1 Cytosol 0 0.439319448153832 0.989647030830384 0 hPsi_site_4698 iPseU_CNN:0.989647030830384;iRNA_PseU:0 4699 chr20 2398149 2398149 1 + C A OV 2398149 - 2398129 2398169 41 ACTGGCTTGCGGGTATAGAGGATGGTGGCACCGCTCAGGTT ACTGGCTTGCGGGTATAGAGTATGGTGGCACCGCTCAGGTT Direct Gain 0 0.95250480085452 0 0.900336027145386 prediction 0.90500960170904 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2398149 chr20:2398149 synonymous SNV . 0 21 hPsi_associated_SNPs_105739 0 0 0 0 0 exosome 0 0.438980291196084 0.800672054290772 0 hPsi_site_4699 iPseU_CNN:0.800672054290772;iRNA_PseU:0 4700 chr17 12623650 12623650 1 + G T rs73977962 12623650 + 12623630 12623670 41 ACCGGAGACCCTTCTTGGGCGATCCGCTTTCTCAGCATGTG ACCGGAGACCCTTCTTGGGCTATCCGCTTTCTCAGCATGTG Direct Gain 0 0.952502993211073 0 0.448582589626312 prediction 0.905005986422146 Functional Gain - MYOCD ENSG00000141052 intronic Human protein_coding chr17:12623650 chr17:12623650 . . 0 21 hPsi_associated_SNPs_105740 0 0 0 0 0 exosome 0 0.439126187871134 0 0 hPsi_site_4700 iPseU_CNN:0;iRNA_PseU:0 4701 chr8 92139360 92139360 1 + C T UCEC 92139360 + 92139340 92139380 41 TTAATCTGAACAACAATCATCTTACGCAGCTTCCTCAAGAA TTAATCTGAACAACAATCATTTTACGCAGCTTCCTCAAGAA Direct Gain 0 0.952495979971717 0 0.29605770111084 prediction 0.904991959943433 Functional Gain - LRRC69 ENSG00000214954 CDS Human protein_coding chr8:92139360 chr8:92139360 nonsynonymous SNV 0.020 3 21 hPsi_associated_SNPs_105741 0 0 0 0 2 nucleoplasm 0 0.437560289258437 0 0 hPsi_site_4701 iPseU_CNN:0;iRNA_PseU:0 4702 chr1 65099830 65099830 1 + C A BLCA 65099830 - 65099810 65099850 41 TCACGCTGCTAACAAAGGTGGACATTTTCCTTTTTGTCTCA TCACGCTGCTAACAAAGGTGTACATTTTCCTTTTTGTCTCA Direct Gain 0 0.952487818936846 0 0.962148427963257 prediction 0.904975637873692 Functional Gain - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65099830 chr1:65099830 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_105742 0 0 0 0 0 unknown 0 0.437933862064277 0.924296855926514 0 hPsi_site_4702 iPseU_CNN:0.924296855926514;iRNA_PseU:0 4703 chr17 76157193 76157193 1 + G A UCEC 76157193 - 76157173 76157213 41 AAGGAGGCCGGCTCGTGGGTCTTCACCACCTTCTTGGCCAC AAGGAGGCCGGCTCGTGGGTTTTCACCACCTTCTTGGCCAC Direct Gain 0 0.952483348366883 0 0.999802947044373 prediction 0.904966696733765 Functional Gain - C17orf99 ENSG00000187997 CDS Human protein_coding chr17:76157193 chr17:76157193 synonymous SNV . 0 21 hPsi_associated_SNPs_105743 0 0 0 0 0 Endoplasmic reticulum 0 0.438718792635302 0.999605894088746 0 hPsi_site_4703 iPseU_CNN:0.999605894088746;iRNA_PseU:0 4704 chr21 47841914 47841914 1 + G A UCEC 47841914 - 47841894 47841934 41 CAGGGCCTCCTGACCCCGGGCTCAGTCTTGCTCCAAAACCC CAGGGCCTCCTGACCCCGGGTTCAGTCTTGCTCCAAAACCC Direct Gain 0 0.952477249835805 0 0.43338069319725 prediction 0.90495449967161 Functional Gain - PCNT ENSG00000160299 CDS Human protein_coding chr21:47841914 chr21:47841914 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105744 0 0 0 0 0 Exosome 0 0.438718315914193 0 0 hPsi_site_4704 iPseU_CNN:0;iRNA_PseU:0 4705 chr15 75503356 75503356 1 + C T rs540551289 75503356 + 75503336 75503376 41 GTCTGCTGGAGACCGCCTGGCTCAATGGCCTGGCTCTGCCC GTCTGCTGGAGACCGCCTGGTTCAATGGCCTGGCTCTGCCC Direct Gain 0 0.952475206469545 0 0.745487570762634 prediction 0.90495041293909 Functional Gain - C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75503356 chr15:75503356 nonsynonymous SNV 0.986 3 21 hPsi_associated_SNPs_105745 0 0 1 0 0 Cytosol 0 0.43871858253928 0.490975141525268 0 hPsi_site_4705 iPseU_CNN:0.490975141525268;iRNA_PseU:0 4706 chr19 53911911 53911911 1 + C T SKCM 53911911 + 53911891 53911931 41 CAAGACCTTTAGTCGGAAGTCACATTTTACATGCCATCATA CAAGACCTTTAGTCGGAAGTTACATTTTACATGCCATCATA Direct Gain 0 0.952467426543065 0 0.976494133472443 prediction 0.90493485308613 Functional Gain - ZNF765 ENSG00000196417 CDS Human protein_coding chr19:53911911 chr19:53911911 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_105746 0 0 1 0 0 Nucleus 0 0.438718123396025 0.952988266944886 0 hPsi_site_4706 iPseU_CNN:0.952988266944886;iRNA_PseU:0 4707 chr13 25671820 25671820 1 + C T rs200679039 25671820 + 25671800 25671840 41 TGCAGCTGCTGCTGCTGCTGCAGCTACCCCTGCTGTGCGCA TGCAGCTGCTGCTGCTGCTGTAGCTACCCCTGCTGTGCGCA Direct Gain 0 0.952463270827216 0 0.961219310760498 prediction 0.904926541654432 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671820 chr13:25671820 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_105747 0 0 0 0 0 Cytosol 0 0.435866319087459 0.922438621520996 0 hPsi_site_4707 iPseU_CNN:0.922438621520996;iRNA_PseU:0 4708 chr8 55533617 55533617 1 + C T CESC 55533617 + 55533597 55533637 41 CTCGCCATTTGAGCCTCACTCATCCTGTTGTGGCCAAGCGA CTCGCCATTTGAGCCTCACTTATCCTGTTGTGGCCAAGCGA Direct Gain 0 0.952456526639664 0 0.994261026382446 prediction 0.904913053279329 Functional Gain - RP1 ENSG00000104237 CDS Human protein_coding chr8:55533617 chr8:55533617 nonsynonymous SNV 0.454 2 21 hPsi_associated_SNPs_105748 0 0 0 0 0 exosome 0 0.43871859366502 0.988522052764892 0 hPsi_site_4708 iPseU_CNN:0.988522052764892;iRNA_PseU:0 4709 chr1 201795327 201795327 1 + G A rs79003561 201795327 - 201795307 201795347 41 TAGTGGAATTATTTTATACTCACCTCCCCCGGGGTTTAGTC TAGTGGAATTATTTTATACTTACCTCCCCCGGGGTTTAGTC Direct Gain 0 0.952449998725896 0 0.998326301574707 prediction 0.904899997451792 Functional Gain - IPO9-AS1 ENSG00000231871 ncRNA_intronic Human antisense chr1:201795327 chr1:201795327 . . 0 21 hPsi_associated_SNPs_105749 0 0 1 0 0 unknown 0 0.438718592995096 0.996652603149414 0 hPsi_site_4709 iPseU_CNN:0.996652603149414;iRNA_PseU:0 4710 chr4 1902399 1902399 1 + G A UCEC 1902399 - 1902379 1902419 41 TGAACAGAAAGGGGACTCTGCTTGATGCTAAATTCCATCCA TGAACAGAAAGGGGACTCTGTTTGATGCTAAATTCCATCCA Direct Gain 0 0.952444040751054 0 0.0780426263809204 prediction 0.904888081502108 Functional Gain - NSD2 ENSG00000109685 CDS Human protein_coding chr4:1902399 chr4:1902399 synonymous SNV . 0 21 hPsi_associated_SNPs_105750 0 0 0 0 0 Nucleus 0 0.438717031557339 0 0 hPsi_site_4710 iPseU_CNN:0;iRNA_PseU:0 4711 chr3 89156913 89156913 1 + C T SKCM 89156913 + 89156893 89156933 41 AGCAACATGGATTGTCAGCTCTCCATCCTCCTCCTTCTCAG AGCAACATGGATTGTCAGCTTTCCATCCTCCTCCTTCTCAG Direct Gain 0 0.952435791103773 0 0.9999920129776 prediction 0.904871582207545 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89156913 chr3:89156913 synonymous SNV . 0 21 hPsi_associated_SNPs_105751 0 0 1 0 1 Ribosome 0 0.438716054862692 0.9999840259552 0 hPsi_site_4711 iPseU_CNN:0.9999840259552;iRNA_PseU:0 4712 chr10 97605144 97605144 1 + G A SKCM 97605144 - 97605124 97605164 41 GGTTTCCTGATTATTGGTTTCATATGGGACTATGCTGAACC GGTTTCCTGATTATTGGTTTTATATGGGACTATGCTGAACC Direct Gain 0 0.952431612700891 0 0.999615788459778 prediction 0.904863225401783 Functional Gain - ENTPD1 ENSG00000138185 CDS Human protein_coding chr10:97605144 chr10:97605144 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105752 0 0 1 0 0 Nucleus 0 0.438718593109895 0.999231576919556 0 hPsi_site_4712 iPseU_CNN:0.999231576919556;iRNA_PseU:0 4713 chr10 95557191 95557191 1 + G T LUSC 95557191 + 95557171 95557211 41 ATGGAGGATGTGTACGCAGTGAAGCACTTCTCAGTGAAAGG ATGGAGGATGTGTACGCAGTTAAGCACTTCTCAGTGAAAGG Direct Gain 0 0.952430990735561 0 0.998716592788696 prediction 0.904861981471123 Functional Gain - LGI1 ENSG00000108231 CDS Human protein_coding chr10:95557191 chr10:95557191 synonymous SNV . 0 21 hPsi_associated_SNPs_105753 0 0 0 12 0 exosome 0 0.439460386173483 0.997433185577392 0 hPsi_site_4713 iPseU_CNN:0.997433185577392;iRNA_PseU:0 4714 chr5 134343808 134343808 1 + C T SKCM 134343808 + 134343788 134343828 41 AACCTGGCTGCAGCTTTTTTCACCCTCTTCAGCTTGGCCAC AACCTGGCTGCAGCTTTTTTTACCCTCTTCAGCTTGGCCAC Direct Gain 0 0.952429543660633 0 0.99733555316925 prediction 0.904859087321266 Functional Gain - CATSPER3 ENSG00000152705 CDS Human protein_coding chr5:134343808 chr5:134343808 synonymous SNV . 0 21 hPsi_associated_SNPs_105754 0 0 0 0 1 cytosol 0 0.438735266425121 0.9946711063385 0 hPsi_site_4714 iPseU_CNN:0.9946711063385;iRNA_PseU:0 4715 chr9 2115978 2115978 1 + G A UCEC 2115978 - 2115958 2115998 41 GTGGCTTGAAGACTTTTGGTCAAACATGCCCGCCTGGATCA GTGGCTTGAAGACTTTTGGTTAAACATGCCCGCCTGGATCA Direct Gain 0 0.952425106343116 0 0.999958157539368 prediction 0.904850212686231 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2115978 chr9:2115978 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105755 0 0 0 0 0 Nucleus 0 0.438728316850063 0.999916315078736 0 hPsi_site_4715 iPseU_CNN:0.999916315078736;iRNA_PseU:0 4716 chr19 3179663 3179663 1 + G T ACC 3179663 + 3179643 3179683 41 TACCTGCGGGGCATGGACTGGATCCTGGCCCTGGCCGTCCT TACCTGCGGGGCATGGACTGTATCCTGGCCCTGGCCGTCCT Direct Gain 0 0.952421124732222 0 0.99725079536438 prediction 0.904842249464444 Functional Gain - S1PR4 ENSG00000125910 CDS Human protein_coding chr19:3179663 chr19:3179663 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105756 0 0 0 0 0 exosome 0 0.43875300618978 0.99450159072876 0 hPsi_site_4716 iPseU_CNN:0.99450159072876;iRNA_PseU:0 4717 chr20 2847206 2847206 1 + G A OV 2847206 - 2847186 2847226 41 GACTCCTCACTTCTTCTGGGCTTGTGCCCTGGCCCGTTGAA GACTCCTCACTTCTTCTGGGTTTGTGCCCTGGCCCGTTGAA Direct Gain 0 0.952414736092132 0 0.98767226934433 prediction 0.904829472184264 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2847206 chr20:2847206 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105757 0 0 0 0 0 chromatin 0 0.438718593142983 0.97534453868866 0 hPsi_site_4717 iPseU_CNN:0.97534453868866;iRNA_PseU:0 4718 chr1 92647095 92647095 1 + C A UCEC 92647095 - 92647075 92647115 41 AGCATAGTGCCACATTTAGAGATACCTCTGTCATTTGACCC AGCATAGTGCCACATTTAGATATACCTCTGTCATTTGACCC Direct Gain 0 0.952413876554007 0 0.983323335647583 prediction 0.904827753108014 Functional Gain - KIAA1107 ENSG00000069712 CDS Human protein_coding chr1:92647095 chr1:92647095 synonymous SNV . 0 21 hPsi_associated_SNPs_105758 0 0 0 0 0 exosome 0 0.438692736021517 0.966646671295166 0 hPsi_site_4718 iPseU_CNN:0.966646671295166;iRNA_PseU:0 4719 chrX 12938465 12938465 1 + G T UCEC 12938465 + 12938445 12938485 41 GAATATCACCGTTGGTAAAAGATACCCGGCAGAGTTATGCA GAATATCACCGTTGGTAAAATATACCCGGCAGAGTTATGCA Direct Gain 0 0.952409584632565 0 0.944864094257355 prediction 0.904819169265129 Functional Gain - TLR8 ENSG00000101916 CDS Human protein_coding chrX:12938465 chrX:12938465 nonsynonymous SNV 0.003 2 21 hPsi_associated_SNPs_105759 0 0 0 0 0 nucleolus 0 0.438718592993024 0.88972818851471 0 hPsi_site_4719 iPseU_CNN:0.88972818851471;iRNA_PseU:0 4720 chr19 805537 805537 1 + T A SKCM 805537 - 805517 805557 41 GAATGGCAAAGGTGGGAGGGAAACCAGCTCCTGCATACGGA GAATGGCAAAGGTGGGAGGGTAACCAGCTCCTGCATACGGA Direct Gain 0 0.952401536728797 0 0.66062605381012 prediction 0.904803073457594 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:805537 chr19:805537 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105760 0 0 0 0 0 Cytosol 0 0.438718840175824 0.32125210762024 0 hPsi_site_4720 iPseU_CNN:0.32125210762024;iRNA_PseU:0 4721 chr1 110882243 110882243 1 + G A BLCA 110882243 - 110882223 110882263 41 CCACCAGAGCCCCCTAACTTCTTGCTCCGCTCACCGCGGGA CCACCAGAGCCCCCTAACTTTTTGCTCCGCTCACCGCGGGA Direct Gain 0 0.952400444528555 0 0.856753826141357 prediction 0.90480088905711 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882243 chr1:110882243 synonymous SNV . 0 21 hPsi_associated_SNPs_105761 0 0 0 0 0 Nucleus 0 0.438718592936038 0.713507652282714 0 hPsi_site_4721 iPseU_CNN:0.713507652282714;iRNA_PseU:0 4722 chr14 96556846 96556846 1 + C T rs61985272 96556846 + 96556826 96556866 41 GCCGCTGTAGCCAGGCCTGTCTTAAGAGGACTTGTGCTTCC GCCGCTGTAGCCAGGCCTGTTTTAAGAGGACTTGTGCTTCC Direct Gain 0 0.952381780792098 0 0.988180756568909 prediction 0.904763561584196 Functional Gain - C14orf132 ENSG00000227051 UTR5 Human protein_coding chr14:96556846 chr14:96556846 . . 0 21 hPsi_associated_SNPs_105762 0 0 1 0 0 exosome 0 0.438718531549564 0.976361513137818 0 hPsi_site_4722 iPseU_CNN:0.976361513137818;iRNA_PseU:0 4723 chr8 64697404 64697404 1 + C T rs561091659 64697404 + 64697384 64697424 41 AGAAGGCACCGTCCCTCATGCACAGCCACATGCCACAGGTC AGAAGGCACCGTCCCTCATGTACAGCCACATGCCACAGGTC Direct Gain 0 0.952379213232624 0 0.993401408195496 prediction 0.904758426465248 Functional Gain - LINC01289 ENSG00000253734 ncRNA_exonic Human lincRNA chr8:64697404 chr8:64697404 . . 0 21 hPsi_associated_SNPs_105763 0 0 0 0 0 unknown 0 0.438718592216049 0.986802816390992 0 hPsi_site_4723 iPseU_CNN:0.986802816390992;iRNA_PseU:0 4724 chr5 147778625 147778625 1 + G A KIRC 147778625 - 147778605 147778645 41 ACAACTCGCAGATATAGGGTCACTGCTTCCTTTAGCTTCCG ACAACTCGCAGATATAGGGTTACTGCTTCCTTTAGCTTCCG Direct Gain 0 0.952371109108514 0 0.0625616014003754 prediction 0.904742218217027 Functional Gain - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147778625 chr5:147778625 synonymous SNV . 0 21 hPsi_associated_SNPs_105764 0 0 0 0 0 Ribosome 0 0.438695598433636 0 0 hPsi_site_4724 iPseU_CNN:0;iRNA_PseU:0 4725 chr5 112174857 112174857 1 + C T SKCM 112174857 + 112174837 112174877 41 ATATGCCACAGATATTCCTTCATCACAGAAACAGTCATTTT ATATGCCACAGATATTCCTTTATCACAGAAACAGTCATTTT Direct Gain 0 0.952365424112582 0 0.0253790318965912 prediction 0.904730848225164 Functional Gain - APC ENSG00000134982 CDS Human protein_coding chr5:112174857 chr5:112174857 nonsynonymous SNV 0.468 2 21 hPsi_associated_SNPs_105765 0 0 1 0 0 Cytosol 0 0.438735037972799 0 0 hPsi_site_4725 iPseU_CNN:0;iRNA_PseU:0 4726 chr15 43426538 43426538 1 + C A UCEC 43426538 - 43426518 43426558 41 AGGACGAGAGCTGGTTGAATGATGTCAATAGTTTCAGAACA AGGACGAGAGCTGGTTGAATTATGTCAATAGTTTCAGAACA Direct Gain 0 0.952361058096029 0 0.352718621492386 prediction 0.904722116192058 Functional Gain - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43426538 chr15:43426538 synonymous SNV . 0 21 hPsi_associated_SNPs_105766 0 0 0 0 0 chromatin 0 0.438718870571613 0 0 hPsi_site_4726 iPseU_CNN:0;iRNA_PseU:0 4727 chr7 116528208 116528208 1 + C T COAD 116528208 + 116528188 116528228 41 TAGCAGCAAAATTCATCATTCATGCCCCTCCTGGAGAATTT TAGCAGCAAAATTCATCATTTATGCCCCTCCTGGAGAATTT Direct Gain 0 0.952359059891905 0 0.99836802482605 prediction 0.90471811978381 Functional Gain - CAPZA2 ENSG00000198898 CDS Human protein_coding chr7:116528208 chr7:116528208 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105767 0 0 1 0 2 Ribosome 0 0.438703231404435 0.9967360496521 0 hPsi_site_4727 iPseU_CNN:0.9967360496521;iRNA_PseU:0 4728 chr5 65054447 65054447 1 + C A UCEC 65054447 - 65054427 65054467 41 AAGACATTGCCTGAAGAGGAGACATCACTTCTCTTCCTAAC AAGACATTGCCTGAAGAGGATACATCACTTCTCTTCCTAAC Direct Gain 0 0.952354661726177 0 0.999845087528229 prediction 0.904709323452355 Functional Gain - NLN ENSG00000123213 CDS Human protein_coding chr5:65054447 chr5:65054447 nonsynonymous SNV 0.966 2 21 hPsi_associated_SNPs_105768 0 0 0 0 0 Ribosome 0 0.438841683990974 0.999690175056458 0 hPsi_site_4728 iPseU_CNN:0.999690175056458;iRNA_PseU:0 4729 chr3 33416811 33416811 1 + G A STAD 33416811 - 33416791 33416831 41 GTAGCCGGTGACAGCCCCTGCATATCTGCACCACACCTTCA GTAGCCGGTGACAGCCCCTGTATATCTGCACCACACCTTCA Direct Gain 0 0.952352063410493 0 0.993563294410706 prediction 0.904704126820986 Functional Gain - FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33416811 chr3:33416811 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_105769 0 0 0 0 0 chromatin 0 0.438497350877422 0.987126588821412 0 hPsi_site_4729 iPseU_CNN:0.987126588821412;iRNA_PseU:0 4730 chr11 55563493 55563493 1 + C T MESO 55563493 + 55563473 55563513 41 GCTGGGTCATATCTCTGGGGCATGTTTGGCCCCTTGGTACT GCTGGGTCATATCTCTGGGGTATGTTTGGCCCCTTGGTACT Direct Gain 0 0.952342320175168 0 0.984443783760071 prediction 0.904684640350335 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563493 chr11:55563493 synonymous SNV . 0 21 hPsi_associated_SNPs_105770 0 0 0 0 0 unknown 0 0.438718592996631 0.968887567520142 0 hPsi_site_4730 iPseU_CNN:0.968887567520142;iRNA_PseU:0 4731 chr1 158576825 158576825 1 + C T SKCM 158576825 + 158576805 158576845 41 GGCCCGAGTGAGCTGAGGATCTTTATCCTCAGTCTTTTGGT GGCCCGAGTGAGCTGAGGATTTTTATCCTCAGTCTTTTGGT Direct Gain 0 0.952341661142107 0 0.99832409620285 prediction 0.904683322284213 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576825 chr1:158576825 synonymous SNV . 0 21 hPsi_associated_SNPs_105771 0 0 0 0 0 unknown 0 0.438718592995047 0.9966481924057 0 hPsi_site_4731 iPseU_CNN:0.9966481924057;iRNA_PseU:0 4732 chr22 48250839 48250839 1 + G A rs550270896 48250839 - 48250819 48250859 41 AGCAAGGGAGGGCCAGGTCTCAGTGTCCCTCTTTACCAGGG AGCAAGGGAGGGCCAGGTCTTAGTGTCCCTCTTTACCAGGG Direct Gain 0 0.952337429838512 0 0.0826825797557831 prediction 0.904674859677024 Functional Gain - LOC284930 ENSG00000224271 ncRNA_exonic Human lincRNA chr22:48250839 chr22:48250839 . . 0 21 hPsi_associated_SNPs_105772 0 0 0 0 0 unknown 0 0.438718564639886 0 0 hPsi_site_4732 iPseU_CNN:0;iRNA_PseU:0 4733 chr5 79732638 79732638 1 + C T UCEC 79732638 + 79732618 79732658 41 TAACCACTGCTCAGTTTCTTCAGAGTTGGCTTCCTCACAGC TAACCACTGCTCAGTTTCTTTAGAGTTGGCTTCCTCACAGC Direct Gain 0 0.952319398852654 0 0.992184996604919 prediction 0.904638797705309 Functional Gain - ZFYVE16 ENSG00000039319 CDS Human protein_coding chr5:79732638 chr5:79732638 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_105773 0 0 1 0 1 Ribosome 0 0.438856776260132 0.984369993209838 0 hPsi_site_4733 iPseU_CNN:0.984369993209838;iRNA_PseU:0 4734 chr1 228481133 228481133 1 + G A rs140221070 228481133 - 228481113 228481153 41 TCCACGGGGGCCATCTTGCTCAGCTCACACCGCAGCACGGC TCCACGGGGGCCATCTTGCTTAGCTCACACCGCAGCACGGC Direct Gain 0 0.952295390411086 0 0.99980103969574 prediction 0.904590780822173 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228481133 chr1:228481133 synonymous SNV . 0 21 hPsi_associated_SNPs_105774 0 0 0 0 0 Ribosome 0 0.438718541380456 0.99960207939148 0 hPsi_site_4734 iPseU_CNN:0.99960207939148;iRNA_PseU:0 4735 chrX 135292909 135292909 1 + C A rs766382402 135292909 - 135292889 135292929 41 CCAGAAGTATTCGTTGTGACGATGTTCCTCTGAAACAGGCT CCAGAAGTATTCGTTGTGACTATGTTCCTCTGAAACAGGCT Direct Gain 0 0.952293505503869 0 0.93609482049942 prediction 0.904587011007739 Functional Gain - FHL1 ENSG00000022267 UTR3 Human protein_coding chrX:135292909 chrX:135292909 . . 0 21 hPsi_associated_SNPs_105775 0 0 0 0 0 chromatin 0 0.438726426439364 0.87218964099884 0 hPsi_site_4735 iPseU_CNN:0.87218964099884;iRNA_PseU:0 4736 chr3 33166008 33166008 1 + C A LAML 33166008 - 33165988 33166028 41 GGAACCCTCGCAGGCTGCGAGACACTCGTAAAAGGCTTTGA GGAACCCTCGCAGGCTGCGATACACTCGTAAAAGGCTTTGA Direct Gain 0 0.952292121268047 0 0.999979615211487 prediction 0.904584242536094 Functional Gain - CRTAP ENSG00000170275 CDS Human protein_coding chr3:33166008 chr3:33166008 nonsynonymous SNV 0.633 0 21 hPsi_associated_SNPs_105776 0 0 0 0 0 Endoplasmic reticulum 0 0.438718591959149 0.999959230422974 0 hPsi_site_4736 iPseU_CNN:0.999959230422974;iRNA_PseU:0 4737 chr19 13008641 13008641 1 + C T COAD 13008641 + 13008621 13008661 41 ACGAGTATCACGTGATCCGGCACGCCATGAACCTGGAGGCC ACGAGTATCACGTGATCCGGTACGCCATGAACCTGGAGGCC Direct Gain 0 0.952291509398504 0 0.99992573261261 prediction 0.904583018797008 Functional Gain - GCDH ENSG00000105607 CDS Human protein_coding chr19:13008641 chr19:13008641 nonsynonymous SNV 0.992 5 21 hPsi_associated_SNPs_105777 0 0 1 0 1 Ribosome 0 0.43871885185457 0.99985146522522 0 hPsi_site_4737 iPseU_CNN:0.99985146522522;iRNA_PseU:0 4738 chr4 22820363 22820363 1 + C A COAD 22820363 - 22820343 22820383 41 GCACAATATACTTGAAGATTGACTTTATCAAGTTGGATAGC GCACAATATACTTGAAGATTTACTTTATCAAGTTGGATAGC Direct Gain 0 0.952288050300573 0 0.476152241230011 prediction 0.904576100601146 Functional Gain - GBA3 ENSG00000249948 CDS Human polymorphic_pseudogene chr4:22820363 chr4:22820363 unknown . 0 21 hPsi_associated_SNPs_105778 0 0 0 0 0 unknown 0 0.438716533388426 0 0 hPsi_site_4738 iPseU_CNN:0;iRNA_PseU:0 4739 chr19 24102878 24102878 1 + C A LUSC 24102878 - 24102858 24102898 41 TCACTCTCACCTACCTGGGGGTTCATCCACCATCTCATCTC TCACTCTCACCTACCTGGGGTTTCATCCACCATCTCATCTC Direct Gain 0 0.952285812466673 0 0.312988132238388 prediction 0.904571624933346 Functional Gain - ZNF726 ENSG00000213967 CDS Human protein_coding chr19:24102878 chr19:24102878 nonsynonymous SNV 0.664 0 21 hPsi_associated_SNPs_105779 0 0 0 0 0 chromatin 0 0.438718707574819 0 0 hPsi_site_4739 iPseU_CNN:0;iRNA_PseU:0 4740 chr15 24923800 24923800 1 + C A LIHC 24923800 - 24923780 24923820 41 GTGGCTGGACTGAAGGAGATGTTAAGCCTATAACTGGTGCT GTGGCTGGACTGAAGGAGATTTTAAGCCTATAACTGGTGCT Direct Gain 0 0.952280310960215 0 0.981744050979614 prediction 0.90456062192043 Functional Gain - NPAP1 ENSG00000185823 CDS Human protein_coding chr15:24923800 chr15:24923800 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105780 0 0 0 0 0 Nucleus 0 0.438723013040623 0.963488101959228 0 hPsi_site_4740 iPseU_CNN:0.963488101959228;iRNA_PseU:0 4741 chr19 9452452 9452452 1 + C T LUAD 9452452 + 9452432 9452472 41 AACACTCATGCCTTAAGACTCACAGGAGAACTTACTTTAGA AACACTCATGCCTTAAGACTTACAGGAGAACTTACTTTAGA Direct Gain 0 0.952278144261921 0 0.999653697013855 prediction 0.904556288523843 Functional Gain - ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9452452 chr19:9452452 nonsynonymous SNV 0.382 2 21 hPsi_associated_SNPs_105781 0 0 1 0 1 Cytosol 0 0.438653967363713 0.99930739402771 0 hPsi_site_4741 iPseU_CNN:0.99930739402771;iRNA_PseU:0 4742 chr17 7807811 7807811 1 + G A CESC 7807811 - 7807791 7807831 41 CAGCAGCTTCTCCCAGTAGTCAGGGTCCACATTCTCCTCCT CAGCAGCTTCTCCCAGTAGTTAGGGTCCACATTCTCCTCCT Direct Gain 0 0.952275223883415 0 0.986185073852539 prediction 0.904550447766829 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7807811 chr17:7807811 nonsynonymous SNV 0.990 4 21 hPsi_associated_SNPs_105782 0 0 0 0 0 Cytosol 0 0.438718494815142 0.972370147705078 0 hPsi_site_4742 iPseU_CNN:0.972370147705078;iRNA_PseU:0 4743 chr9 109687491 109687491 1 + G A LUAD 109687491 - 109687471 109687511 41 GGAACCTATTCATGAATCTTCTAAATGGAATCCCCTTGGTC GGAACCTATTCATGAATCTTTTAAATGGAATCCCCTTGGTC Direct Gain 0 0.952273792132468 0 0.999800682067871 prediction 0.904547584264936 Functional Gain - ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109687491 chr9:109687491 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_105783 0 0 0 0 0 exosome 0 0.438718592995095 0.999601364135742 0 hPsi_site_4743 iPseU_CNN:0.999601364135742;iRNA_PseU:0 4744 chr2 26614148 26614148 1 + G A rs561037611 26614148 - 26614128 26614168 41 AACAGTGAATTGCTCAATTTCACTTTCCCCTTGTTGACAGC AACAGTGAATTGCTCAATTTTACTTTCCCCTTGTTGACAGC Direct Gain 0 0.952272467527508 0 0.999033749103546 prediction 0.904544935055017 Functional Gain - SELENOI ENSG00000138018 UTR3 Human protein_coding chr2:26614148 chr2:26614148 . . 0 21 hPsi_associated_SNPs_105784 0 0 0 0 0 unknown 0 0.438718542131524 0.998067498207092 0 hPsi_site_4744 iPseU_CNN:0.998067498207092;iRNA_PseU:0 4745 chr19 7711143 7711143 1 + G T UCEC 7711143 + 7711123 7711163 41 CCCTGCCTGTAGGGCTCGGGGACCTCCAGCCGGCTGGAGCC CCCTGCCTGTAGGGCTCGGGTACCTCCAGCCGGCTGGAGCC Direct Gain 0 0.952272425837582 0 0.999067485332489 prediction 0.904544851675164 Functional Gain - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7711143 chr19:7711143 synonymous SNV . 0 21 hPsi_associated_SNPs_105785 0 0 1 0 2 chromatin 0 0.438718593895406 0.998134970664978 0 hPsi_site_4745 iPseU_CNN:0.998134970664978;iRNA_PseU:0 4746 chr8 118183343 118183343 1 + G A ESCA 118183343 - 118183323 118183363 41 GACCAGATGTGCAGGCTGTGCACAGACAGCACCCCGTCGAC GACCAGATGTGCAGGCTGTGTACAGACAGCACCCCGTCGAC Direct Gain 0 0.952269414168405 0 0.364856958389282 prediction 0.90453882833681 Functional Gain - SLC30A8 ENSG00000164756 CDS Human protein_coding chr8:118183343 chr8:118183343 synonymous SNV . 0 21 hPsi_associated_SNPs_105786 0 0 0 0 0 membrane 0 0.438666612180063 0 0 hPsi_site_4746 iPseU_CNN:0;iRNA_PseU:0 4747 chr10 70451467 70451467 1 + C T LUSC 70451467 + 70451447 70451487 41 CTGAAGTAAATGAATTGAACCAAATTCCTTCTCATAAAGCA CTGAAGTAAATGAATTGAACTAAATTCCTTCTCATAAAGCA Direct Gain 0 0.952261076626265 0 0.0485858023166656 prediction 0.90452215325253 Functional Gain - TET1 ENSG00000138336 CDS Human protein_coding chr10:70451467 chr10:70451467 stopgain 0.998 0 21 hPsi_associated_SNPs_105787 0 0 1 0 0 chromatin 0 0.438732863022086 0 0 hPsi_site_4747 iPseU_CNN:0;iRNA_PseU:0 4748 chr1 116941293 116941293 1 + G A BLCA 116941293 - 116941273 116941313 41 ACCCCAATGTCTGCTTTCTTCAAAGCTGGAGAGTCATTCAC ACCCCAATGTCTGCTTTCTTTAAAGCTGGAGAGTCATTCAC Direct Gain 0 0.95225952124948 0 0.930045485496521 prediction 0.90451904249896 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116941293 chr1:116941293 synonymous SNV . 0 21 hPsi_associated_SNPs_105788 0 0 0 0 0 Nucleus 0 0.438718597755896 0.860090970993042 0 hPsi_site_4748 iPseU_CNN:0.860090970993042;iRNA_PseU:0 4749 chr1 242045224 242045224 1 + G A LIHC 242045224 - 242045204 242045244 41 AAGTAACTTAATATTGCAATCAGATTCCTAGAGTCCCCAGA AAGTAACTTAATATTGCAATTAGATTCCTAGAGTCCCCAGA Direct Gain 0 0.952237435049408 0 0.00149306654930115 prediction 0.904474870098815 Functional Gain - EXO1 ENSG00000174371 CDS Human protein_coding chr1:242045224 chr1:242045224 nonsynonymous SNV 0.702 2 21 hPsi_associated_SNPs_105789 0 0 0 0 0 Nucleus 0 0.438977012895154 0 0 hPsi_site_4749 iPseU_CNN:0;iRNA_PseU:0 4750 chr4 126373581 126373581 1 + G A STAD 126373581 - 126373561 126373601 41 TGGGCCATGCACACAGGAGTCATGATCCACAGATTCCACCT TGGGCCATGCACACAGGAGTTATGATCCACAGATTCCACCT Direct Gain 0 0.95223045775924 0 0.994570136070251 prediction 0.904460915518479 Functional Gain - FAT4 ENSG00000196159 CDS Human protein_coding chr4:126373581 chr4:126373581 nonsynonymous SNV 0.787 0 21 hPsi_associated_SNPs_105790 0 0 0 0 0 Endoplasmic reticulum 0 0.43981111321515 0.989140272140502 0 hPsi_site_4750 iPseU_CNN:0.989140272140502;iRNA_PseU:0 4751 chr12 104015856 104015856 1 + G A SKCM 104015856 - 104015836 104015876 41 GGGTCCAAATAAGTTGTCGTCAGCACAGGTTTCACAGGCTG GGGTCCAAATAAGTTGTCGTTAGCACAGGTTTCACAGGCTG Direct Gain 0 0.95222358444891 0 0.449885278940201 prediction 0.90444716889782 Functional Gain - STAB2 ENSG00000136011 CDS Human protein_coding chr12:104015856 chr12:104015856 nonsynonymous SNV 0.193 1 21 hPsi_associated_SNPs_105791 0 0 0 0 0 nucleoplasm 0 0.438714033808598 0 0 hPsi_site_4751 iPseU_CNN:0;iRNA_PseU:0 4752 chr4 110791634 110791634 1 + G T UCEC 110791634 + 110791614 110791654 41 CTACTGAAAGAGTTGAAGGAGATGATTCTCAATGGTCTCTC CTACTGAAAGAGTTGAAGGATATGATTCTCAATGGTCTCTC Direct Gain 0 0.952221699363374 0 0.425090163946152 prediction 0.904443398726748 Functional Gain - LRIT3 ENSG00000183423 CDS Human protein_coding chr4:110791634 chr4:110791634 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105792 0 0 0 0 0 Nucleus 0 0.438718558772104 0 0 hPsi_site_4752 iPseU_CNN:0;iRNA_PseU:0 4753 chr11 56431593 56431593 1 + C T SKCM 56431593 + 56431573 56431613 41 AAGCAGGTCTGCTTGGCTCTCATGCTGGGCTCTTACCTGGC AAGCAGGTCTGCTTGGCTCTTATGCTGGGCTCTTACCTGGC Direct Gain 0 0.952218944083283 0 0.87443208694458 prediction 0.904437888166565 Functional Gain - OR5AR1 ENSG00000172459 CDS Human polymorphic_pseudogene chr11:56431593 chr11:56431593 synonymous SNV . 0 21 hPsi_associated_SNPs_105793 0 0 0 0 0 unknown 0 0.438718593070858 0.74886417388916 0 hPsi_site_4753 iPseU_CNN:0.74886417388916;iRNA_PseU:0 4754 chr19 42265227 42265227 1 + C T SKCM 42265227 + 42265207 42265247 41 GACAAGGATGCTGTGGCCTTCACCTGTGAACCTGAGGTTCA GACAAGGATGCTGTGGCCTTTACCTGTGAACCTGAGGTTCA Direct Gain 0 0.952212158114064 0 0.964381098747253 prediction 0.904424316228127 Functional Gain - CEACAM6 ENSG00000086548 CDS Human protein_coding chr19:42265227 chr19:42265227 synonymous SNV . 0 21 hPsi_associated_SNPs_105794 0 0 0 0 1 Ribosome 0 0.438718256566383 0.928762197494506 0 hPsi_site_4754 iPseU_CNN:0.928762197494506;iRNA_PseU:0 4755 chr19 51738465 51738465 1 + G A rs58981829 51738465 - 51738445 51738485 41 AAGAGCGAGCAGGGCTGTAACACCAGCTCCTCCAATGGCCC AAGAGCGAGCAGGGCTGTAATACCAGCTCCTCCAATGGCCC Direct Gain 0 0.95219703958938 0 0.998791933059692 prediction 0.90439407917876 Functional Gain - CD33 ENSG00000105383 CDS Human protein_coding chr19:51738465 chr19:51738465 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105795 0 0 0 0 0 exosome 0 0.438718824604986 0.997583866119384 0 hPsi_site_4755 iPseU_CNN:0.997583866119384;iRNA_PseU:0 4756 chr12 56428384 56428384 1 + G T LUAD 56428384 + 56428364 56428404 41 AGATGCGCTTCAGCCTCTCAGACCTCCCCTATGATGTGAAC AGATGCGCTTCAGCCTCTCATACCTCCCCTATGATGTGAAC Direct Gain 0 0.952193680084256 0 0.977068543434143 prediction 0.904387360168512 Functional Gain - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428384 chr12:56428384 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_105796 0 0 0 0 1 Cytosol 0 0.438390808628891 0.954137086868286 0 hPsi_site_4756 iPseU_CNN:0.954137086868286;iRNA_PseU:0 4757 chr15 84651504 84651504 1 + G T SKCM 84651504 + 84651484 84651524 41 AAATGTGGAATAACAAAAATGACCTTTATCTGGATGATGAC AAATGTGGAATAACAAAAATTACCTTTATCTGGATGATGAC Direct Gain 0 0.95219165860764 0 0.353532314300537 prediction 0.90438331721528 Functional Gain - ADAMTSL3 ENSG00000156218 CDS Human protein_coding chr15:84651504 chr15:84651504 nonsynonymous SNV 0.225 1 21 hPsi_associated_SNPs_105797 0 0 0 0 0 cytosol 0 0.438718822450518 0 0 hPsi_site_4757 iPseU_CNN:0;iRNA_PseU:0 4758 chr19 55329954 55329954 1 + G A STAD 55329954 - 55329934 55329974 41 TTCCCTGCATGTGCTGTGGTCACAGGGCTCATGTTGAAGCT TTCCCTGCATGTGCTGTGGTTACAGGGCTCATGTTGAAGCT Direct Gain 0 0.952190181292168 0 0.999984622001648 prediction 0.904380362584335 Functional Gain - KIR3DL1 ENSG00000167633 CDS Human protein_coding chr19:55329954 chr19:55329954 synonymous SNV . 0 21 hPsi_associated_SNPs_105798 0 0 0 0 0 exosome 0 0.438512539730419 0.999969244003296 0 hPsi_site_4758 iPseU_CNN:0.999969244003296;iRNA_PseU:0 4759 chr11 67075398 67075398 1 + C A COAD 67075398 - 67075378 67075418 41 CTGCCCACCTCTTTGGAAGTGACACTCTCCAGGTCACTGAC CTGCCCACCTCTTTGGAAGTTACACTCTCCAGGTCACTGAC Direct Gain 0 0.952189989775558 0 0.999988317489624 prediction 0.904379979551117 Functional Gain - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075398 chr11:67075398 synonymous SNV . 0 21 hPsi_associated_SNPs_105799 0 0 0 0 0 nucleus 0 0.438722250060308 0.999976634979248 0 hPsi_site_4759 iPseU_CNN:0.999976634979248;iRNA_PseU:0 4760 chr1 223567377 223567377 1 + C T UCEC 223567377 + 223567357 223567397 41 AGGTCGCTGGTCCCCTTCCTCAGTTCCCTCGGAGCGGTCTT AGGTCGCTGGTCCCCTTCCTTAGTTCCCTCGGAGCGGTCTT Direct Gain 0 0.952189343967346 0 0.99978369474411 prediction 0.904378687934693 Functional Gain - CCDC185 ENSG00000178395 CDS Human protein_coding chr1:223567377 chr1:223567377 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_105800 0 0 0 0 0 unknown 0 0.438718592993364 0.99956738948822 0 hPsi_site_4760 iPseU_CNN:0.99956738948822;iRNA_PseU:0 4761 chr22 38021856 38021856 1 + C T STAD 38021856 + 38021836 38021876 41 CTGGATCTCCCGCCTGCGGGCACCACCTACCCAGCTATGCC CTGGATCTCCCGCCTGCGGGTACCACCTACCCAGCTATGCC Direct Gain 0 0.95218843219049 0 0.834754288196564 prediction 0.90437686438098 Functional Gain - GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021856 chr22:38021856 synonymous SNV . 0 21 hPsi_associated_SNPs_105801 0 0 1 0 1 chromatin 0 0.438718589765891 0.669508576393128 0 hPsi_site_4761 iPseU_CNN:0.669508576393128;iRNA_PseU:0 4762 chr1 85561635 85561635 1 + G A OV 85561635 - 85561615 85561655 41 GAACTTGAAGCAGAAGATGTCATCTGGGCTCTCCAGCATTA GAACTTGAAGCAGAAGATGTTATCTGGGCTCTCCAGCATTA Direct Gain 0 0.952180435409126 0 0.312497705221176 prediction 0.904360870818251 Functional Gain - WDR63 ENSG00000162643 CDS Human protein_coding chr1:85561635 chr1:85561635 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105802 0 0 0 0 0 exosome 0 0.438722032974484 0 0 hPsi_site_4762 iPseU_CNN:0;iRNA_PseU:0 4763 chr9 74588095 74588095 1 + G A rs80083119 74588095 - 74588075 74588115 41 CCAAAAGGTGGTCAGAATTTCACATTCTAAATTGACTTTTT CCAAAAGGTGGTCAGAATTTTACATTCTAAATTGACTTTTT Direct Gain 0 0.952177942132907 0 0.9493408203125 prediction 0.904355884265814 Functional Gain - C9orf85 ENSG00000155621 UTR3 Human protein_coding chr9:74588095 chr9:74588095 . . 0 21 hPsi_associated_SNPs_105803 0 0 0 0 0 Cytosol 0 0.438718029883896 0.898681640625 0 hPsi_site_4763 iPseU_CNN:0.898681640625;iRNA_PseU:0 4764 chr21 35201947 35201947 1 + C T rs1108000 35201947 + 35201927 35201967 41 GAAATTGCCCAGGTTATTGCCTCATACACCGCCACCGGCCC GAAATTGCCCAGGTTATTGCTTCATACACCGCCACCGGCCC Direct Gain 0 0.952173358848265 0 0.999772906303406 prediction 0.904346717696529 Functional Gain - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35201947 chr21:35201947 synonymous SNV . 0 21 hPsi_associated_SNPs_105804 0 0 1 0 1 Nucleus 0 0.438718375583723 0.999545812606812 0 hPsi_site_4764 iPseU_CNN:0.999545812606812;iRNA_PseU:0 4765 chr17 36557068 36557068 1 + A T rs564174810 36557068 + 36557048 36557088 41 GAAAAACTCCAATGGTCTTTAATGGTTTCTGCAGCTGGCCA GAAAAACTCCAATGGTCTTTTATGGTTTCTGCAGCTGGCCA Direct Gain 0 0.952169905546121 0 0.984222292900085 prediction 0.904339811092241 Functional Gain - SOCS7 ENSG00000174111;ENSG00000266103 intergenic Human other chr17:36557068 chr17:36557068 . . 0 21 hPsi_associated_SNPs_105805 0 0 1 0 0 Cytosol 0 0.438719195591228 0.96844458580017 0 hPsi_site_4765 iPseU_CNN:0.96844458580017;iRNA_PseU:0 4766 chr2 133402949 133402949 1 + G A rs61735719 133402949 - 133402929 133402969 41 GCTGTCGGTGGTGGAGTGCGCATGTACGCGCAGGCGCTTCT GCTGTCGGTGGTGGAGTGCGTATGTACGCGCAGGCGCTTCT Direct Gain 0 0.952169264414345 0 0.999968826770782 prediction 0.904338528828691 Functional Gain - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402949 chr2:133402949 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105806 1 0 1 0 0 nucleus 0 0.438732584366838 0.999937653541564 0 hPsi_site_4766 iPseU_CNN:0.999937653541564;iRNA_PseU:0 4767 chr5 169504785 169504785 1 + C A UCEC 169504785 - 169504765 169504805 41 GAATTCATGGAAGCCAGAGAGATGATGGACATCTGTCTGTA GAATTCATGGAAGCCAGAGATATGATGGACATCTGTCTGTA Direct Gain 0 0.952162707000125 0 0.99976122379303 prediction 0.90432541400025 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169504785 chr5:169504785 synonymous SNV . 0 21 hPsi_associated_SNPs_105807 0 0 0 0 0 Cytosol 0 0.439322597370967 0.99952244758606 0 hPsi_site_4767 iPseU_CNN:0.99952244758606;iRNA_PseU:0 4768 chr5 31799459 31799459 1 + G A ESCA 31799459 - 31799439 31799479 41 GCTTCTGGATGGCCGCCTGGCAGAGCCGCTGCTCCGGCCCA GCTTCTGGATGGCCGCCTGGTAGAGCCGCTGCTCCGGCCCA Direct Gain 0 0.952153714009564 0 0.999963879585266 prediction 0.904307428019127 Functional Gain - PDZD2 ENSG00000133401 CDS Human protein_coding chr5:31799459 chr5:31799459 nonsynonymous SNV 0.985 3 21 hPsi_associated_SNPs_105808 0 0 0 0 0 chromatin 0 0.43871859138986 0.999927759170532 0 hPsi_site_4768 iPseU_CNN:0.999927759170532;iRNA_PseU:0 4769 chr17 28796184 28796184 1 + G A rs150809481 28796184 - 28796164 28796204 41 TATCAGCAGAGTCTGTTTCTCATACAACTTTGCTTTCCCAA TATCAGCAGAGTCTGTTTCTTATACAACTTTGCTTTCCCAA Direct Gain 0 0.952147169612181 0 0.107712179422379 prediction 0.904294339224363 Functional Gain - CPD ENSG00000108582 UTR3 Human protein_coding chr17:28796184 chr17:28796184 . . 0 21 hPsi_associated_SNPs_105809 0 0 0 0 0 Nucleus 0 0.438718799737957 0 0 hPsi_site_4769 iPseU_CNN:0;iRNA_PseU:0 4770 chr20 30115313 30115313 1 + C T UCEC 30115313 + 30115293 30115333 41 TCAGACATGCCTGAAACAATCACCAGCCGGGATGCCGCCCG TCAGACATGCCTGAAACAATTACCAGCCGGGATGCCGCCCG Direct Gain 0 0.952147010176891 0 0.962450742721558 prediction 0.904294020353781 Functional Gain - HM13 ENSG00000101294 CDS Human protein_coding chr20:30115313 chr20:30115313 synonymous SNV . 0 21 hPsi_associated_SNPs_105810 0 0 1 0 2 Ribosome 0 0.438738750048116 0.924901485443116 0 hPsi_site_4770 iPseU_CNN:0.924901485443116;iRNA_PseU:0 4771 chr3 10206688 10206688 1 + G A COAD 10206688 - 10206668 10206708 41 TGAGCGCGTCCATGTTGCGGCACAGGTCGTCCAGCACCCAG TGAGCGCGTCCATGTTGCGGTACAGGTCGTCCAGCACCCAG Direct Gain 0 0.952135603324074 0 0.99480128288269 prediction 0.904271206648148 Functional Gain - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10206688 chr3:10206688 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105811 0 0 0 0 0 Nucleus 0 0.439508144675414 0.98960256576538 0 hPsi_site_4771 iPseU_CNN:0.98960256576538;iRNA_PseU:0 4772 chr9 117044605 117044605 1 + G A LUSC 117044605 - 117044585 117044625 41 GAAGGGGACACCTACCTTGGCTCCAGTGCGGCCCTTCTCGC GAAGGGGACACCTACCTTGGTTCCAGTGCGGCCCTTCTCGC Direct Gain 0 0.952135001462368 0 0.999993205070496 prediction 0.904270002924735 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117044605 chr9:117044605 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_105812 0 0 0 0 0 Nucleus 0 0.438723700204292 0.999986410140992 0 hPsi_site_4772 iPseU_CNN:0.999986410140992;iRNA_PseU:0 4773 chr5 90449047 90449047 1 + G A LUSC 90449047 - 90449027 90449067 41 GAAGGATGCTCTCTCCCAGTCAGGTGGCACCTTTTTAGATT GAAGGATGCTCTCTCCCAGTTAGGTGGCACCTTTTTAGATT Direct Gain 0 0.952132907269231 0 0.112737387418747 prediction 0.904265814538462 Functional Gain - ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90449047 chr5:90449047 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_105813 0 0 0 0 0 Nucleus 0 0.438718504071818 0 0 hPsi_site_4773 iPseU_CNN:0;iRNA_PseU:0 4774 chr7 6193752 6193752 1 + G A rs61753119 6193752 - 6193732 6193772 41 ACCGCGCAGGCGGAGCCGGACTCAACCCTTCCGGGGCTTCC ACCGCGCAGGCGGAGCCGGATTCAACCCTTCCGGGGCTTCC Direct Gain 0 0.952126711982821 0 0.988793134689331 prediction 0.904253423965642 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193752 chr7:6193752 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_105814 0 0 0 0 0 Ribosome 0 0.438718593200678 0.977586269378662 0 hPsi_site_4774 iPseU_CNN:0.977586269378662;iRNA_PseU:0 4775 chr20 37209989 37209989 1 + C T BLCA 37209989 + 37209969 37210009 41 GGTTTGCTGTTGTTATTGATCATCTGGCTACGCTTCTTACT GGTTTGCTGTTGTTATTGATTATCTGGCTACGCTTCTTACT Direct Gain 0 0.952120009010245 0 0.997732639312744 prediction 0.904240018020489 Functional Gain - ADIG ENSG00000182035 CDS Human protein_coding chr20:37209989 chr20:37209989 synonymous SNV . 0 21 hPsi_associated_SNPs_105815 0 0 0 0 1 nucleolus 0 0.438719040273019 0.995465278625488 0 hPsi_site_4775 iPseU_CNN:0.995465278625488;iRNA_PseU:0 4776 chr8 2024303 2024303 1 + G T rs529946883 2024303 + 2024283 2024323 41 AACCGGGACTACGTCATCGTGACCTGGAAGCCGCCCAACAC AACCGGGACTACGTCATCGTTACCTGGAAGCCGCCCAACAC Direct Gain 0 0.952111041352645 0 0.99999988079071 prediction 0.90422208270529 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2024303 chr8:2024303 synonymous SNV . 0 21 hPsi_associated_SNPs_105816 0 0 0 0 2 exosome 0 0.43871728724785 0.99999976158142 0 hPsi_site_4776 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4777 chr3 23848871 23848871 1 + C T LGG 23848871 + 23848851 23848891 41 AAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACT AAGAAGGAGAGTAAAGTCAGTATGAGCAAAAACTCCAAACT Direct Gain 0 0.952110969458782 0 0.997373938560486 prediction 0.904221938917564 Functional Gain - UBE2E1 ENSG00000170142 CDS Human protein_coding chr3:23848871 chr3:23848871 synonymous SNV . 0 21 hPsi_associated_SNPs_105817 0 0 1 0 1 chromatin 0 0.438570968800802 0.994747877120972 0 hPsi_site_4777 iPseU_CNN:0.994747877120972;iRNA_PseU:0 4778 chr19 12858873 12858873 1 + C T SKCM 12858873 + 12858853 12858893 41 GCAGACAAGGTCAACACCTTCTCGGCCCTCCTCCTGGAGCC GCAGACAAGGTCAACACCTTTTCGGCCCTCCTCCTGGAGCC Direct Gain 0 0.952108595540933 0 0.41471391916275 prediction 0.904217191081867 Functional Gain - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12858873 chr19:12858873 synonymous SNV . 0 21 hPsi_associated_SNPs_105818 0 0 1 0 1 Ribosome 0 0.438718588339738 0 0 hPsi_site_4778 iPseU_CNN:0;iRNA_PseU:0 4779 chr4 89425491 89425491 1 + C T KIRC 89425491 + 89425471 89425511 41 ATGTGCGACGAAGACATTATCAAATTATTCCACCCCGAAGA ATGTGCGACGAAGACATTATTAAATTATTCCACCCCGAAGA Direct Gain 0 0.952105936088624 0 0.67277854681015 prediction 0.904211872177248 Functional Gain - HERC5 ENSG00000138646 CDS Human protein_coding chr4:89425491 chr4:89425491 synonymous SNV . 0 21 hPsi_associated_SNPs_105819 0 0 1 0 1 exosome 0 0.43871805568643 0.3455570936203 0 hPsi_site_4779 iPseU_CNN:0.3455570936203;iRNA_PseU:0 4780 chr19 17664371 17664371 1 + G A LUSC 17664371 - 17664351 17664391 41 TGGAAAGGTCAGGAATATCTCATTGTCTTGGGGTAGGCCGA TGGAAAGGTCAGGAATATCTTATTGTCTTGGGGTAGGCCGA Direct Gain 0 0.952105059413379 0 0.965188980102539 prediction 0.904210118826757 Functional Gain - FAM129C ENSG00000167483 CDS Human protein_coding chr19:17664371 chr19:17664371 synonymous SNV . 0 21 hPsi_associated_SNPs_105820 0 0 0 0 0 exosome 0 0.438718556015536 0.930377960205078 0 hPsi_site_4780 iPseU_CNN:0.930377960205078;iRNA_PseU:0 4781 chr3 99886649 99886649 1 + C A UCEC 99886649 - 99886629 99886669 41 GCTCGGACGGCCGAGCTGCAGATGATCAGCATCAGGACCGA GCTCGGACGGCCGAGCTGCATATGATCAGCATCAGGACCGA Direct Gain 0 0.952104530723733 0 0.992839753627777 prediction 0.904209061447467 Functional Gain - CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99886649 chr3:99886649 synonymous SNV . 0 21 hPsi_associated_SNPs_105821 0 0 0 0 0 Ribosome 0 0.438894821238499 0.985679507255554 0 hPsi_site_4781 iPseU_CNN:0.985679507255554;iRNA_PseU:0 4782 chr5 140794543 140794543 1 + G A HNSC 140794543 - 140794523 140794563 41 CCAGGCGTTCTGGCCGGAGTCTCTGTCCACCGCCACCACCT CCAGGCGTTCTGGCCGGAGTTTCTGTCCACCGCCACCACCT Direct Gain 0 0.952102668859358 0 0.999922513961792 prediction 0.904205337718716 Functional Gain - PCDHGA10 ENSG00000253846 CDS Human protein_coding chr5:140794543 chr5:140794543 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105822 0 0 0 0 0 exosome 0 0.438783763727616 0.999845027923584 0 hPsi_site_4782 iPseU_CNN:0.999845027923584;iRNA_PseU:0 4783 chr19 49652861 49652861 1 + G T LUAD 49652861 + 49652841 49652881 41 GGAAGATGTTCCGGGAGAAGGACCTCCGAGGCGTAACTCCC GGAAGATGTTCCGGGAGAAGTACCTCCGAGGCGTAACTCCC Direct Gain 0 0.952101969739209 0 0.999994516372681 prediction 0.904203939478418 Functional Gain - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652861 chr19:49652861 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105823 0 0 1 0 1 Cytosol 0 0.438718592992518 0.999989032745362 0 hPsi_site_4783 iPseU_CNN:0.999989032745362;iRNA_PseU:0 4784 chr19 58863752 58863752 1 + G A LUSC 58863752 - 58863732 58863772 41 GCCCAGGAGGATGTGGAGGCCACCTTTCCAGTCCATCAGCC GCCCAGGAGGATGTGGAGGCTACCTTTCCAGTCCATCAGCC Direct Gain 0 0.952091177421644 0 0.0745296478271484 prediction 0.904182354843288 Functional Gain - A1BG ENSG00000121410 CDS Human protein_coding chr19:58863752 chr19:58863752 synonymous SNV . 0 21 hPsi_associated_SNPs_105824 0 0 1 0 0 nucleus 0 0.438718592994567 0 0 hPsi_site_4784 iPseU_CNN:0;iRNA_PseU:0 4785 chr19 15852520 15852520 1 + C T SKCM 15852520 + 15852500 15852540 41 ATTCAGATGTTCTTCTCCTTCATGTTTGGCTTCACTCACTC ATTCAGATGTTCTTCTCCTTTATGTTTGGCTTCACTCACTC Direct Gain 0 0.952087786722635 0 0.94279557466507 prediction 0.904175573445271 Functional Gain - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852520 chr19:15852520 synonymous SNV . 0 21 hPsi_associated_SNPs_105825 0 0 0 0 0 unknown 0 0.438718926437412 0.88559114933014 0 hPsi_site_4785 iPseU_CNN:0.88559114933014;iRNA_PseU:0 4786 chr2 159954168 159954168 1 + G T UCEC 159954168 + 159954148 159954188 41 GGAAGTGACTTTGGTCCAGAGACTTCTCCAGTCCTGCACCT GGAAGTGACTTTGGTCCAGATACTTCTCCAGTCCTGCACCT Direct Gain 0 0.952084310801431 0 0.972728490829468 prediction 0.904168621602862 Functional Gain - TANC1 ENSG00000115183 CDS Human protein_coding chr2:159954168 chr2:159954168 nonsynonymous SNV 0.929 2 21 hPsi_associated_SNPs_105826 0 0 1 0 1 Nucleus 0 0.438718592521829 0.945456981658936 0 hPsi_site_4786 iPseU_CNN:0.945456981658936;iRNA_PseU:0 4787 chr3 49689465 49689465 1 + C T CESC 49689465 + 49689445 49689485 41 GTGAGGGTGGCCTGTCCCCTCTTCCACCCCAGCCCCCAGCC GTGAGGGTGGCCTGTCCCCTTTTCCACCCCAGCCCCCAGCC Direct Gain 0 0.952081255147686 0 0.964274942874908 prediction 0.904162510295372 Functional Gain - BSN ENSG00000164061 CDS Human protein_coding chr3:49689465 chr3:49689465 nonsynonymous SNV 0.943 1 21 hPsi_associated_SNPs_105827 0 0 0 0 0 chromatin 0 0.438718592995102 0.928549885749816 0 hPsi_site_4787 iPseU_CNN:0.928549885749816;iRNA_PseU:0 4788 chr19 14139151 14139151 1 + C T LUSC 14139151 + 14139131 14139171 41 TTCATCCGAGCAGTCATCTTCACCTGCGGGGGCTCCCGGTG TTCATCCGAGCAGTCATCTTTACCTGCGGGGGCTCCCGGTG Direct Gain 0 0.952065297310769 0 0.999997794628143 prediction 0.904130594621539 Functional Gain - RLN3 ENSG00000171136 CDS Human protein_coding chr19:14139151 chr19:14139151 synonymous SNV . 0 21 hPsi_associated_SNPs_105828 0 0 0 0 1 exosome 0 0.438716651623921 0.999995589256286 0 hPsi_site_4788 iPseU_CNN:0.999995589256286;iRNA_PseU:0 4789 chr1 85589864 85589864 1 + C A OV 85589864 - 85589844 85589884 41 TAATGTCGTTGTAGAAAGGTGATCTCTGAATAGTGTGGACA TAATGTCGTTGTAGAAAGGTTATCTCTGAATAGTGTGGACA Direct Gain 0 0.952065024113412 0 0.9730184674263 prediction 0.904130048226824 Functional Gain - WDR63 ENSG00000162643 CDS Human protein_coding chr1:85589864 chr1:85589864 stopgain 0.972 1 21 hPsi_associated_SNPs_105829 0 0 0 0 0 exosome 0 0.438768622175026 0.9460369348526 0 hPsi_site_4789 iPseU_CNN:0.9460369348526;iRNA_PseU:0 4790 chr12 57577900 57577900 1 + G A LUSC 57577900 - 57577880 57577920 41 GAGCCGGGCGACCTCGATGACATCAAAGCCCTGGTCTGTCC GAGCCGGGCGACCTCGATGATATCAAAGCCCTGGTCTGTCC Direct Gain 0 0.952061699870507 0 0.999704122543335 prediction 0.904123399741015 Functional Gain - LRP1 ENSG00000123384 CDS Human protein_coding chr12:57577900 chr12:57577900 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_105830 0 0 0 0 0 Exosome 0 0.438717774464285 0.99940824508667 0 hPsi_site_4790 iPseU_CNN:0.99940824508667;iRNA_PseU:0 4791 chr6 27220706 27220706 1 + G A SKCM 27220706 - 27220686 27220726 41 AAGCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTC AAGCCGAACTCGGTACATGTTTGATACAACCACTGCCGGTC Direct Gain 0 0.952058216645555 0 0.999775886535645 prediction 0.90411643329111 Functional Gain - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27220706 chr6:27220706 synonymous SNV . 0 21 hPsi_associated_SNPs_105831 0 0 0 0 0 Cytosol 0 0.438712499632919 0.99955177307129 0 hPsi_site_4791 iPseU_CNN:0.99955177307129;iRNA_PseU:0 4792 chr10 50531202 50531202 1 + C A HNSC 50531202 - 50531182 50531222 41 TGGTAGCTGTTCTGATGGGTGTTGGAAACTTCAGCGGGCAC TGGTAGCTGTTCTGATGGGTTTTGGAAACTTCAGCGGGCAC Direct Gain 0 0.952054995947684 0 0.990342855453491 prediction 0.904109991895368 Functional Gain - C10orf71 ENSG00000177354 CDS Human protein_coding chr10:50531202 chr10:50531202 nonsynonymous SNV 0.448 0 21 hPsi_associated_SNPs_105832 0 0 0 0 0 chromatin 0 0.438718573929406 0.980685710906982 0 hPsi_site_4792 iPseU_CNN:0.980685710906982;iRNA_PseU:0 4793 chr15 94858848 94858848 1 + G T LUAD 94858848 + 94858828 94858868 41 TGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGT TGAAGGAAGGCCGGAACCTGTTTGTCCGAGATCGCTGTGGT Direct Gain 0 0.952052618030323 0 0.999147653579712 prediction 0.904105236060646 Functional Gain - MCTP2 ENSG00000140563 CDS Human protein_coding chr15:94858848 chr15:94858848 nonsynonymous SNV 0.955 4 21 hPsi_associated_SNPs_105833 0 0 0 0 2 exosome 0 0.438718592995102 0.998295307159424 0 hPsi_site_4793 iPseU_CNN:0.998295307159424;iRNA_PseU:0 4794 chr20 42344652 42344652 1 + C T SKCM 42344652 + 42344632 42344672 41 GGGACCAGGGACCAGCTTTTCATGCAGGAGAAAGCCCGGCA GGGACCAGGGACCAGCTTTTTATGCAGGAGAAAGCCCGGCA Direct Gain 0 0.952049645762851 0 0.958929538726807 prediction 0.904099291525703 Functional Gain - MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42344652 chr20:42344652 synonymous SNV . 0 21 hPsi_associated_SNPs_105834 0 0 1 0 1 Cytosol 0 0.438718939256091 0.917859077453614 0 hPsi_site_4794 iPseU_CNN:0.917859077453614;iRNA_PseU:0 4795 chr2 169571573 169571573 1 + C A GBM 169571573 - 169571553 169571593 41 CCTACTCGGGCCATATTGTTGACATATGAAAAGGTAATCAA CCTACTCGGGCCATATTGTTTACATATGAAAAGGTAATCAA Direct Gain 0 0.952044305165618 0 0.0155709087848663 prediction 0.904088610331236 Functional Gain - CERS6 ENSG00000172292 CDS Human protein_coding chr2:169571573 chr2:169571573 synonymous SNV . 0 21 hPsi_associated_SNPs_105835 0 0 0 0 0 Endoplasmic reticulum 0 0.43871910272475 0 0 hPsi_site_4795 iPseU_CNN:0;iRNA_PseU:0 4796 chr3 12858966 12858966 1 + G T rs17037287 12858966 + 12858946 12858986 41 GTCAAGGTCCTGGCATTCTTGTCGCTGGCTGAGGTGGGTCA GTCAAGGTCCTGGCATTCTTTTCGCTGGCTGAGGTGGGTCA Direct Gain 0 0.952032878498413 0 0.839695453643799 prediction 0.904065756996826 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858966 chr3:12858966 nonsynonymous SNV 0.981 3 21 hPsi_associated_SNPs_105836 0 0 0 0 0 chromatin 0 0.43873335757891 0.679390907287598 0 hPsi_site_4796 iPseU_CNN:0.679390907287598;iRNA_PseU:0 4797 chr15 80884001 80884001 1 + G T HNSC 80884001 + 80883981 80884021 41 ACCATGGCCAGCAGAGCGGTGAGCAGCACTCCCACCAGCAG ACCATGGCCAGCAGAGCGGTTAGCAGCACTCCCACCAGCAG Direct Gain 0 0.952031241271643 0 0.999858856201172 prediction 0.904062482543285 Functional Gain - ARNT2 ENSG00000172379 CDS Human protein_coding chr15:80884001 chr15:80884001 stopgain 1.000 1 21 hPsi_associated_SNPs_105837 0 0 0 0 2 Cytosol 0 0.438150022663523 0.999717712402344 0 hPsi_site_4797 iPseU_CNN:0.999717712402344;iRNA_PseU:0 4798 chr19 45448424 45448424 1 + G A STAD 45448424 - 45448404 45448444 41 TGGTCGTCATAGTAGGTCTGCATGAAGCCCCGGAAGGTGCT TGGTCGTCATAGTAGGTCTGTATGAAGCCCCGGAAGGTGCT Direct Gain 0 0.952030755511606 0 0.999793648719788 prediction 0.904061511023212 Functional Gain - APOC4 ENSG00000224916;ENSG00000267467 CDS Human other chr19:45448424 chr19:45448424 nonsynonymous SNV 0.445 0 21 hPsi_associated_SNPs_105838 0 0 0 0 0 Endoplasmic reticulum 0 0.438718599407486 0.999587297439576 0 hPsi_site_4798 iPseU_CNN:0.999587297439576;iRNA_PseU:0 4799 chr19 56165867 56165867 1 + C T rs150252140 56165867 + 56165847 56165887 41 GGAAAGAGCCGAAACACGGACTCGAGCTTAATCCCAGGAGG GGAAAGAGCCGAAACACGGATTCGAGCTTAATCCCAGGAGG Direct Gain 0 0.952030515277516 0 0.999993324279785 prediction 0.904061030555033 Functional Gain - U2AF2 ENSG00000063244 UTR5 Human protein_coding chr19:56165867 chr19:56165867 . . 0 21 hPsi_associated_SNPs_105839 0 0 1 0 0 Ribosome 0 0.438718592743739 0.99998664855957 0 hPsi_site_4799 iPseU_CNN:0.99998664855957;iRNA_PseU:0 4800 chr16 29824915 29824915 1 + G A SARC 29824915 - 29824895 29824935 41 AGGGGCACCACTGCCCCATTCTCTTGCTTTTCCCCTACACT AGGGGCACCACTGCCCCATTTTCTTGCTTTTCCCCTACACT Direct Gain 0 0.952025938359664 0 0.915078997612 prediction 0.904051876719328 Functional Gain - PRRT2 ENSG00000167371 CDS Human protein_coding chr16:29824915 chr16:29824915 synonymous SNV . 0 21 hPsi_associated_SNPs_105840 0 0 0 0 0 nucleoplasm 0 0.438718592995575 0.830157995224 0 hPsi_site_4800 iPseU_CNN:0.830157995224;iRNA_PseU:0 4801 chr11 76170459 76170459 1 + G A rs182999257 76170459 - 76170439 76170479 41 AACTAAAATAATGACAACATCATATTTCAACCTATCATTCA AACTAAAATAATGACAACATTATATTTCAACCTATCATTCA Direct Gain 0 0.952023463851248 0 2.89082527160645e-05 prediction 0.904046927702496 Functional Gain - EMSY ENSG00000158636 intronic Human protein_coding chr11:76170459 chr11:76170459 . . 0 21 hPsi_associated_SNPs_105841 0 0 0 0 0 Nucleus 0 0.438915838705074 0 0 hPsi_site_4801 iPseU_CNN:0;iRNA_PseU:0 4802 chr2 170592392 170592392 1 + C T LUSC 170592392 + 170592372 170592412 41 GGCATCCTTTATCAGAGGTTCACATATGGGATCCTTTGACA GGCATCCTTTATCAGAGGTTTACATATGGGATCCTTTGACA Direct Gain 0 0.952019150445288 0 0.0170697569847107 prediction 0.904038300890576 Functional Gain - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170592392 chr2:170592392 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105842 0 0 1 0 0 unknown 0 0.438718592501629 0 0 hPsi_site_4802 iPseU_CNN:0;iRNA_PseU:0 4803 chr20 30408223 30408223 1 + G T LUAD 30408223 + 30408203 30408243 41 GAAGCCCAAGGCTGAGCAGGGAGCCTCAGGCAGCCAGGATC GAAGCCCAAGGCTGAGCAGGTAGCCTCAGGCAGCCAGGATC Direct Gain 0 0.952018758823373 0 0.999951958656311 prediction 0.904037517646746 Functional Gain - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30408223 chr20:30408223 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_105843 0 0 0 0 0 exosome 0 0.438749582808686 0.999903917312622 0 hPsi_site_4803 iPseU_CNN:0.999903917312622;iRNA_PseU:0 4804 chr16 50757249 50757249 1 + G A UVM 50757249 - 50757229 50757269 41 TGCCAGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAA TGCCAGCATCAGTGCCAAGGTTTGGGCACCCACACTGCCAA Direct Gain 0 0.95201664207132 0 0.364523351192474 prediction 0.90403328414264 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50757249 chr16:50757249 nonsynonymous SNV 0.430 4 21 hPsi_associated_SNPs_105844 0 0 0 0 0 exosome 0 0.438718592999776 0 0 hPsi_site_4804 iPseU_CNN:0;iRNA_PseU:0 4805 chr12 123461093 123461093 1 + C T rs115152276 123461093 + 123461073 123461113 41 GGAGTGTAGGCTAGACTTGGCTTCCAGCCTGGGCCCTGTCT GGAGTGTAGGCTAGACTTGGTTTCCAGCCTGGGCCCTGTCT Direct Gain 0 0.952015325672633 0 0.999724805355072 prediction 0.904030651345267 Functional Gain - OGFOD2 ENSG00000256028 ncRNA_intronic Human processed_transcript chr12:123461093 chr12:123461093 . . 0 21 hPsi_associated_SNPs_105845 0 0 1 0 0 Cytosol 0 0.438718592995107 0.999449610710144 0 hPsi_site_4805 iPseU_CNN:0.999449610710144;iRNA_PseU:0 4806 chrX 150889924 150889924 1 + C A UCEC 150889924 - 150889904 150889944 41 ATTGCCAGCGTACTCCTGGAGATGGGCATCCCCATGGCCTG ATTGCCAGCGTACTCCTGGATATGGGCATCCCCATGGCCTG Direct Gain 0 0.952014295585727 0 0.983674883842468 prediction 0.904028591171455 Functional Gain - FATE1 ENSG00000147378 CDS Human protein_coding chrX:150889924 chrX:150889924 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_105846 0 0 0 0 0 Cytosol 0 0.438718527725629 0.967349767684936 0 hPsi_site_4806 iPseU_CNN:0.967349767684936;iRNA_PseU:0 4807 chr7 150768813 150768813 1 + G A BLCA 150768813 - 150768793 150768833 41 TGGAGCGCTGTGGACATAATCAGCTCCGACACCCCTATCAG TGGAGCGCTGTGGACATAATTAGCTCCGACACCCCTATCAG Direct Gain 0 0.952011156949101 0 0.999988257884979 prediction 0.904022313898201 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150768813 chr7:150768813 synonymous SNV . 0 21 hPsi_associated_SNPs_105847 0 0 0 0 0 Ribosome 0 0.438712440162616 0.999976515769958 0 hPsi_site_4807 iPseU_CNN:0.999976515769958;iRNA_PseU:0 4808 chr4 48492311 48492311 1 + G A COAD 48492311 - 48492291 48492331 41 ACCTCGTCCCCCAGGGCCGCCATGGGCGCACTGCTCCCGCC ACCTCGTCCCCCAGGGCCGCTATGGGCGCACTGCTCCCGCC Direct Gain 0 0.952006012529279 0 0.999909162521362 prediction 0.904012025058558 Functional Gain - ZAR1 ENSG00000182223 CDS Human protein_coding chr4:48492311 chr4:48492311 nonsynonymous SNV 0.177 1 21 hPsi_associated_SNPs_105848 0 0 0 0 0 unknown 0 0.438739819571192 0.999818325042724 0 hPsi_site_4808 iPseU_CNN:0.999818325042724;iRNA_PseU:0 4809 chrX 83129027 83129027 1 + C A rs144524564 83129027 - 83129007 83129047 41 GTAGACTCTTCATCATTCTTGACAGACTTTTTATTATCTGT GTAGACTCTTCATCATTCTTTACAGACTTTTTATTATCTGT Direct Gain 0 0.952004700399916 0 0.751622200012207 prediction 0.904009400799833 Functional Gain - CYLC1 ENSG00000183035 CDS Human protein_coding chrX:83129027 chrX:83129027 synonymous SNV . 0 21 hPsi_associated_SNPs_105849 0 0 0 0 0 unknown 0 0.43941148837326 0.503244400024414 0 hPsi_site_4809 iPseU_CNN:0.503244400024414;iRNA_PseU:0 4810 chr7 152139872 152139872 1 + G A rs56123659 152139872 - 152139852 152139892 41 AGTTGCAAACAGTCTGAGTTCTTCTGCCATCAGCTGTGTTT AGTTGCAAACAGTCTGAGTTTTTCTGCCATCAGCTGTGTTT Direct Gain 0 0.95200304544289 0 0.0576336085796356 prediction 0.904006090885779 Functional Gain - FABP5P3 ENSG00000241735 ncRNA_exonic Human transcribed_processed_pseudogene chr7:152139872 chr7:152139872 . . 0 21 hPsi_associated_SNPs_105850 0 0 0 0 0 unknown 0 0.436717854207344 0 0 hPsi_site_4810 iPseU_CNN:0;iRNA_PseU:0 4811 chr2 128321787 128321787 1 + C T UCEC 128321787 + 128321767 128321807 41 ACCGGCGTGGCCATCGGGGGCATCATCAAAGAGGCAAAGCC ACCGGCGTGGCCATCGGGGGTATCATCAAAGAGGCAAAGCC Direct Gain 0 0.95199894045514 0 0.981561243534088 prediction 0.90399788091028 Functional Gain - MYO7B ENSG00000169994 CDS Human protein_coding chr2:128321787 chr2:128321787 synonymous SNV . 0 21 hPsi_associated_SNPs_105851 0 0 0 0 1 exosome 0 0.438718654916873 0.963122487068176 0 hPsi_site_4811 iPseU_CNN:0.963122487068176;iRNA_PseU:0 4812 chr5 140182624 140182624 1 + G T ACC 140182624 + 140182604 140182644 41 TCGTATGAGCTGCAGCCTGGGACCGGCGGTGCGCGCATCCC TCGTATGAGCTGCAGCCTGGTACCGGCGGTGCGCGCATCCC Direct Gain 0 0.951998356968386 0 0.999999523162842 prediction 0.903996713936772 Functional Gain - PCDHA3 ENSG00000255408 CDS Human protein_coding chr5:140182624 chr5:140182624 synonymous SNV . 0 21 hPsi_associated_SNPs_105852 0 0 0 0 0 insoluble cytoplasm 0 0.437845806000723 0.999999046325684 0 hPsi_site_4812 iPseU_CNN:0.999999046325684;iRNA_PseU:0 4813 chr19 58115769 58115769 1 + C A rs76787024 58115769 - 58115749 58115789 41 ATAGGAGGGCCTTACCTAGGGATGCCATAACTGCAAAGTTC ATAGGAGGGCCTTACCTAGGTATGCCATAACTGCAAAGTTC Direct Gain 0 0.951996883556868 0 0.999831974506378 prediction 0.903993767113737 Functional Gain - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58115769 chr19:58115769 nonsynonymous SNV 0.015 3 21 hPsi_associated_SNPs_105853 0 0 0 0 0 Nucleus 0 0.438718592267201 0.999663949012756 0 hPsi_site_4813 iPseU_CNN:0.999663949012756;iRNA_PseU:0 4814 chr3 24003672 24003672 1 + C T BLCA 24003672 + 24003652 24003692 41 GCAAGAAAACATCAAAAGCTCTTCTCCTCCATCTTCTGATT GCAAGAAAACATCAAAAGCTTTTCTCCTCCATCTTCTGATT Direct Gain 0 0.951977987042935 0 0.135233223438263 prediction 0.903955974085869 Functional Gain - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:24003672 chr3:24003672 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_105854 0 0 1 1 0 Ribosome 0 0.438721531303453 0 0 hPsi_site_4814 iPseU_CNN:0;iRNA_PseU:0 4815 chr14 77926052 77926052 1 + G A UCEC 77926052 - 77926032 77926072 41 TCAAGCTTACTCACTTCCGTCACCTCACACTTGCCTTCTTC TCAAGCTTACTCACTTCCGTTACCTCACACTTGCCTTCTTC Direct Gain 0 0.951974831381462 0 0.956779778003693 prediction 0.903949662762925 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77926052 chr14:77926052 synonymous SNV . 0 21 hPsi_associated_SNPs_105855 0 0 0 0 0 Ribosome 0 0.438709653943246 0.913559556007386 0 hPsi_site_4815 iPseU_CNN:0.913559556007386;iRNA_PseU:0 4816 chr17 59479063 59479063 1 + C T BLCA 59479063 + 59479043 59479083 41 AGGCGGATGTTCCCCCCCTTCAAGGTGCGAGTCAGCGGCCT AGGCGGATGTTCCCCCCCTTTAAGGTGCGAGTCAGCGGCCT Direct Gain 0 0.95196978500884 0 0.998769402503967 prediction 0.903939570017679 Functional Gain - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59479063 chr17:59479063 synonymous SNV . 0 21 hPsi_associated_SNPs_105856 0 0 0 0 1 Cytosol 0 0.438718987699309 0.997538805007934 0 hPsi_site_4816 iPseU_CNN:0.997538805007934;iRNA_PseU:0 4817 chr12 108011178 108011178 1 + G A SKCM 108011178 - 108011158 108011198 41 GCAGCCTGGCTGAAAGAGTTCATATCACCCTGGGGGGTTGT GCAGCCTGGCTGAAAGAGTTTATATCACCCTGGGGGGTTGT Direct Gain 0 0.951966664757537 0 0.987296223640442 prediction 0.903933329515074 Functional Gain - BTBD11 ENSG00000151136 CDS Human protein_coding chr12:108011178 chr12:108011178 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105857 0 0 0 0 0 cytosol 0 0.438718618118102 0.974592447280884 0 hPsi_site_4817 iPseU_CNN:0.974592447280884;iRNA_PseU:0 4818 chr19 51274894 51274894 1 + C T LUAD 51274894 + 51274874 51274914 41 TGGAGAGGAGGAGTTTCTGTCATCCTGTCCCCGTGGCAACG TGGAGAGGAGGAGTTTCTGTTATCCTGTCCCCGTGGCAACG Direct Gain 0 0.951965237636824 0 0.999852895736694 prediction 0.903930475273648 Functional Gain - GPR32 ENSG00000142511 CDS Human protein_coding chr19:51274894 chr19:51274894 nonsynonymous SNV 0.007 1 21 hPsi_associated_SNPs_105858 0 0 0 0 0 unknown 0 0.438718608449253 0.999705791473388 0 hPsi_site_4818 iPseU_CNN:0.999705791473388;iRNA_PseU:0 4819 chr7 150933659 150933659 1 + G T UCEC 150933659 + 150933639 150933679 41 AGTTGGAGCGGGCTTACAGTGAAATAGAACAACTGCAGGTG AGTTGGAGCGGGCTTACAGTTAAATAGAACAACTGCAGGTG Direct Gain 0 0.951965130879746 0 0.985569357872009 prediction 0.903930261759492 Functional Gain - CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933659 chr7:150933659 stopgain 1.000 1 21 hPsi_associated_SNPs_105859 0 0 1 0 1 Nucleus 0 0.438718593569859 0.971138715744018 0 hPsi_site_4819 iPseU_CNN:0.971138715744018;iRNA_PseU:0 4820 chr20 3854740 3854740 1 + G A rs530059216 3854740 - 3854720 3854760 41 TGCATAGCGATATTTTCATTCATATTCGTTGCTGTGCAGTA TGCATAGCGATATTTTCATTTATATTCGTTGCTGTGCAGTA Direct Gain 0 0.951963519288679 0 0.977122366428375 prediction 0.903927038577359 Functional Gain - MAVS ENSG00000088888;ENSG00000229539 intergenic Human other chr20:3854740 chr20:3854740 . . 0 21 hPsi_associated_SNPs_105860 0 0 1 0 0 Nucleus 0 0.435326588489136 0.95424473285675 0 hPsi_site_4820 iPseU_CNN:0.95424473285675;iRNA_PseU:0 4821 chr11 6261751 6261751 1 + G A COAD 6261751 - 6261731 6261771 41 GCCCACCATGAAGAGGTACTCTTCTTCCCTGGCTGGCGGCG GCCCACCATGAAGAGGTACTTTTCTTCCCTGGCTGGCGGCG Direct Gain 0 0.951956399354495 0 0.985708475112915 prediction 0.90391279870899 Functional Gain - CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6261751 chr11:6261751 nonsynonymous SNV 0.986 5 21 hPsi_associated_SNPs_105861 0 0 0 0 0 exosome 0 0.438718592995102 0.97141695022583 0 hPsi_site_4821 iPseU_CNN:0.97141695022583;iRNA_PseU:0 4822 chr19 55086244 55086244 1 + G A rs74551170 55086244 - 55086224 55086264 41 GTCACGTTCCCTCCTAAGGTCACCACAGGGCTGGGCAGAGC GTCACGTTCCCTCCTAAGGTTACCACAGGGCTGGGCAGAGC Direct Gain 0 0.951946794340482 0 0.899194121360779 prediction 0.903893588680965 Functional Gain - LILRA2 ENSG00000239998 CDS Human protein_coding chr19:55086244 chr19:55086244 synonymous SNV . 0 21 hPsi_associated_SNPs_105862 0 0 0 0 0 Cytosol 0 0.438718597906671 0.798388242721558 0 hPsi_site_4822 iPseU_CNN:0.798388242721558;iRNA_PseU:0 4823 chr6 17507493 17507493 1 + C T SKCM 17507493 + 17507473 17507513 41 GGGGGAGTAACATGTTTAATCATCTTTCGGCCGTCAGCGAA GGGGGAGTAACATGTTTAATTATCTTTCGGCCGTCAGCGAA Direct Gain 0 0.951943208636781 0 0.0685299932956696 prediction 0.903886417273561 Functional Gain - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17507493 chr6:17507493 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_105863 0 0 0 0 2 exosome 0 0.438812901725206 0 0 hPsi_site_4823 iPseU_CNN:0;iRNA_PseU:0 4824 chr22 39817937 39817937 1 + G A LUAD 39817937 - 39817917 39817957 41 CCATGGGCTGCCTCTAGGGCCTTGTACAACCCCTCCGACAT CCATGGGCTGCCTCTAGGGCTTTGTACAACCCCTCCGACAT Direct Gain 0 0.951939967995362 0 0.997736573219299 prediction 0.903879935990724 Functional Gain - TAB1 ENSG00000100324 CDS Human protein_coding chr22:39817937 chr22:39817937 synonymous SNV . 0 21 hPsi_associated_SNPs_105864 0 0 0 0 0 Cytosol 0 0.438722070227464 0.995473146438598 0 hPsi_site_4824 iPseU_CNN:0.995473146438598;iRNA_PseU:0 4825 chr3 32932556 32932556 1 + C T SKCM 32932556 + 32932536 32932576 41 GTAGACAAGGAGGGCTACATCATTGTCGCCGACCGCAGCAA GTAGACAAGGAGGGCTACATTATTGTCGCCGACCGCAGCAA Direct Gain 0 0.95193743961356 0 0.861398220062256 prediction 0.903874879227119 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932556 chr3:32932556 synonymous SNV . 0 21 hPsi_associated_SNPs_105865 0 0 1 0 0 cytosol 0 0.4387091118039 0.722796440124512 0 hPsi_site_4825 iPseU_CNN:0.722796440124512;iRNA_PseU:0 4826 chr6 28501899 28501899 1 + C T LUAD 28501899 + 28501879 28501919 41 CGGGCTACGGTCAGCTCAGTCAAGACAGACATCCTGGCGTA CGGGCTACGGTCAGCTCAGTTAAGACAGACATCCTGGCGTA Direct Gain 0 0.95193722745949 0 0.986668765544891 prediction 0.90387445491898 Functional Gain - GPX5 ENSG00000224586 CDS Human protein_coding chr6:28501899 chr6:28501899 synonymous SNV . 0 21 hPsi_associated_SNPs_105866 0 0 0 0 0 unknown 0 0.438816208799073 0.973337531089782 0 hPsi_site_4826 iPseU_CNN:0.973337531089782;iRNA_PseU:0 4827 chr19 36634000 36634000 1 + C T LUAD 36634000 + 36633980 36634020 41 ACTGATGGTTTTGGCATTGACACATGTCGCAGCATGGTGGC ACTGATGGTTTTGGCATTGATACATGTCGCAGCATGGTGGC Direct Gain 0 0.951933716890347 0 0.767767906188965 prediction 0.903867433780693 Functional Gain - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36634000 chr19:36634000 synonymous SNV . 0 21 hPsi_associated_SNPs_105867 0 0 1 0 2 Ribosome 0 0.438711273315332 0.53553581237793 0 hPsi_site_4827 iPseU_CNN:0.53553581237793;iRNA_PseU:0 4828 chr12 41966511 41966511 1 + G A LUSC 41966511 - 41966491 41966531 41 GCTGCTTGAGTAATACAGGTCATACTCTCCATGATTTCGAA GCTGCTTGAGTAATACAGGTTATACTCTCCATGATTTCGAA Direct Gain 0 0.951930596114618 0 0.999990403652191 prediction 0.903861192229236 Functional Gain - PDZRN4 ENSG00000165966 CDS Human protein_coding chr12:41966511 chr12:41966511 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105868 0 0 0 0 0 exosome 0 0.438417646862742 0.999980807304382 0 hPsi_site_4828 iPseU_CNN:0.999980807304382;iRNA_PseU:0 4829 chr2 224824473 224824473 1 + G T COAD 224824473 + 224824453 224824493 41 CAAGGGACATCTTTTTCACAGACTTGCCTTACACAGTTTCT CAAGGGACATCTTTTTCACATACTTGCCTTACACAGTTTCT Direct Gain 0 0.951929389714264 0 0.140276551246643 prediction 0.903858779428528 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824473 chr2:224824473 nonsynonymous SNV 0.391 0 21 hPsi_associated_SNPs_105869 0 0 1 0 0 Ribosome 0 0.409490070037926 0 0 hPsi_site_4829 iPseU_CNN:0;iRNA_PseU:0 4830 chr14 38678783 38678783 1 + C T SKCM 38678783 + 38678763 38678803 41 AGCGCCATCCTGATCTCTTTCATCTACTCCGTGGTGTGCCT AGCGCCATCCTGATCTCTTTTATCTACTCCGTGGTGTGCCT Direct Gain 0 0.951927437866741 0 0.965523481369019 prediction 0.903854875733483 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38678783 chr14:38678783 synonymous SNV . 0 21 hPsi_associated_SNPs_105870 0 0 0 0 0 nucleus 0 0.438691787938633 0.931046962738038 0 hPsi_site_4830 iPseU_CNN:0.931046962738038;iRNA_PseU:0 4831 chr11 117859150 117859150 1 + C T SKCM 117859150 + 117859130 117859170 41 TTGAAGCAGAATTTTTCCACCACATCCTCCACTGGACACCC TTGAAGCAGAATTTTTCCACTACATCCTCCACTGGACACCC Direct Gain 0 0.951920223119913 0 0.863674402236938 prediction 0.903840446239827 Functional Gain - IL10RA ENSG00000110324 CDS Human protein_coding chr11:117859150 chr11:117859150 nonsynonymous SNV 0.925 3 21 hPsi_associated_SNPs_105871 0 0 0 0 2 nucleoplasm 0 0.438723667873806 0.727348804473876 0 hPsi_site_4831 iPseU_CNN:0.727348804473876;iRNA_PseU:0 4832 chr19 22256347 22256347 1 + G A rs10423157 22256347 - 22256327 22256367 41 CCTGGGGGTTTGGCTACCATCTCATGTCTCTTCATATTACA CCTGGGGGTTTGGCTACCATTTCATGTCTCTTCATATTACA Direct Gain 0 0.951918898978768 0 0.76903623342514 prediction 0.903837797957536 Functional Gain - ZNF257 ENSG00000197134 CDS Human protein_coding chr19:22256347 chr19:22256347 synonymous SNV . 0 21 hPsi_associated_SNPs_105872 0 0 0 0 0 chromatin 0 0.438718584618506 0.53807246685028 0 hPsi_site_4832 iPseU_CNN:0.53807246685028;iRNA_PseU:0 4833 chr7 143792812 143792812 1 + C T SKCM 143792812 + 143792792 143792832 41 CTATTTGCGGGTTCTGCGTTCATCTTAGTGGGGCCGCTCTG CTATTTGCGGGTTCTGCGTTTATCTTAGTGGGGCCGCTCTG Direct Gain 0 0.951915327151573 0 0.999494969844818 prediction 0.903830654303147 Functional Gain - OR2A12 ENSG00000221858 CDS Human protein_coding chr7:143792812 chr7:143792812 synonymous SNV . 0 21 hPsi_associated_SNPs_105873 0 0 0 0 0 unknown 0 0.438718545526332 0.998989939689636 0 hPsi_site_4833 iPseU_CNN:0.998989939689636;iRNA_PseU:0 4834 chrX 119739938 119739938 1 + G A LGG 119739938 - 119739918 119739958 41 TGTAAGGATTTCTATATGTTCATGGCTGTAAGACAAATGTC TGTAAGGATTTCTATATGTTTATGGCTGTAAGACAAATGTC Direct Gain 0 0.951914642169437 0 0.980137825012207 prediction 0.903829284338874 Functional Gain - MCTS1 ENSG00000232119 CDS Human protein_coding chrX:119739938 chrX:119739938 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105874 0 0 0 0 0 Cytosol 0 0.438718877778812 0.960275650024414 0 hPsi_site_4834 iPseU_CNN:0.960275650024414;iRNA_PseU:0 4835 chr12 49312207 49312207 1 + G A LUAD 49312207 - 49312187 49312227 41 ACTTCAATCTCTTTGGAGCTCTTCTCATCCTTCACCTGCAG ACTTCAATCTCTTTGGAGCTTTTCTCATCCTTCACCTGCAG Direct Gain 0 0.951914357111242 0 0.999785661697388 prediction 0.903828714222484 Functional Gain - CCDC65 ENSG00000139537 CDS Human protein_coding chr12:49312207 chr12:49312207 synonymous SNV . 0 21 hPsi_associated_SNPs_105875 0 0 1 0 0 chromatin 0 0.438542941182754 0.999571323394776 0 hPsi_site_4835 iPseU_CNN:0.999571323394776;iRNA_PseU:0 4836 chr7 30668274 30668274 1 + G A LUAD 30668274 - 30668254 30668294 41 ACAACTTACTGTTCTCTGTTCATCTCCTTCTCGTACATGGA ACAACTTACTGTTCTCTGTTTATCTCCTTCTCGTACATGGA Direct Gain 0 0.951913202348274 0 0.792040467262268 prediction 0.903826404696547 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30668274 chr7:30668274 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_105876 0 0 0 0 0 Cytosol 0 0.438716899882748 0.584080934524536 0 hPsi_site_4836 iPseU_CNN:0.584080934524536;iRNA_PseU:0 4837 chr17 26671527 26671527 1 + G A UCEC 26671527 - 26671507 26671547 41 CGGTCCCGCAGTTCAAAGGTCTCCTCATCTTCACTGGGGGA CGGTCCCGCAGTTCAAAGGTTTCCTCATCTTCACTGGGGGA Direct Gain 0 0.951900540264594 0 0.940254211425781 prediction 0.903801080529188 Functional Gain - TNFAIP1 ENSG00000109079 CDS Human protein_coding chr17:26671527 chr17:26671527 synonymous SNV . 0 21 hPsi_associated_SNPs_105877 0 0 0 0 0 Ribosome 0 0.438836928231187 0.880508422851562 0 hPsi_site_4837 iPseU_CNN:0.880508422851562;iRNA_PseU:0 4838 chr18 51013247 51013247 1 + C A LUAD 51013247 - 51013227 51013267 41 GAGAGTGAACTGCGGGTGGGGATATCCACAGGTGGGAGACG GAGAGTGAACTGCGGGTGGGTATATCCACAGGTGGGAGACG Direct Gain 0 0.951899509645817 0 0.880137920379639 prediction 0.903799019291633 Functional Gain - DCC ENSG00000187323 CDS Human protein_coding chr18:51013247 chr18:51013247 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_105878 0 0 0 0 0 exosome 0 0.437542174005657 0.760275840759278 0 hPsi_site_4838 iPseU_CNN:0.760275840759278;iRNA_PseU:0 4839 chr19 11891699 11891699 1 + C T UCEC 11891699 + 11891679 11891719 41 ATTGCACAGGTTTTCGAAGACACATGATAACGCACACTGGA ATTGCACAGGTTTTCGAAGATACATGATAACGCACACTGGA Direct Gain 0 0.951896291429652 0 0.925988674163818 prediction 0.903792582859304 Functional Gain - ZNF441 ENSG00000197044 CDS Human protein_coding chr19:11891699 chr19:11891699 nonsynonymous SNV 0.257 4 21 hPsi_associated_SNPs_105879 0 0 1 0 0 chromatin 0 0.438747880914432 0.851977348327636 0 hPsi_site_4839 iPseU_CNN:0.851977348327636;iRNA_PseU:0 4840 chr16 30198715 30198715 1 + C A rs141827038 30198715 - 30198695 30198735 41 GGGCCGGGTCCCCTCGTGGGGACGGTCCTTCTCCTGCAAGG GGGCCGGGTCCCCTCGTGGGTACGGTCCTTCTCCTGCAAGG Direct Gain 0 0.951892241776175 0 0.99999988079071 prediction 0.90378448355235 Functional Gain - CORO1A ENSG00000102879 CDS Human protein_coding chr16:30198715 chr16:30198715 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_105880 0 0 0 0 0 Cytosol 0 0.438827760992189 0.99999976158142 0 hPsi_site_4840 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4841 chr17 4713296 4713296 1 + C T rs139166795 4713296 + 4713276 4713316 41 AAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACC AAAGGAGCACGGAGGCACGGTACGGCGTGCGGATCGATACC Direct Gain 0 0.951886086041974 0 0.999987185001373 prediction 0.903772172083948 Functional Gain - PLD2 ENSG00000129219 CDS Human protein_coding chr17:4713296 chr17:4713296 nonsynonymous SNV 0.531 0 21 hPsi_associated_SNPs_105881 0 0 0 0 1 Cytosol 0 0.438718724497131 0.999974370002746 0 hPsi_site_4841 iPseU_CNN:0.999974370002746;iRNA_PseU:0 4842 chr22 29664186 29664186 1 + T A rs143153949 29664186 - 29664166 29664206 41 GGGTGGGGTCAGGAGGGATGAACCACCGCTTACTCGTTCTT GGGTGGGGTCAGGAGGGATGTACCACCGCTTACTCGTTCTT Direct Gain 0 0.951884265064441 0 0.99130517244339 prediction 0.903768530128883 Functional Gain - EWSR1 ENSG00000100263;ENSG00000182944 UTR5 Human other chr22:29664186 chr22:29664186 . . 0 21 hPsi_associated_SNPs_105882 0 0 0 0 0 Cytosol 0 0.438718630482403 0.98261034488678 0 hPsi_site_4842 iPseU_CNN:0.98261034488678;iRNA_PseU:0 4843 chr15 41023291 41023291 1 + G A BLCA 41023291 - 41023271 41023311 41 AGGGAGAGTCGTAGATTTTGCAGATTCTGGTTTCCCCTCTT AGGGAGAGTCGTAGATTTTGTAGATTCTGGTTTCCCCTCTT Direct Gain 0 0.951879386767681 0 0.950809240341187 prediction 0.903758773535363 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41023291 chr15:41023291 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_105883 0 0 0 0 0 Cytosol 0 0.438764405436326 0.901618480682374 0 hPsi_site_4843 iPseU_CNN:0.901618480682374;iRNA_PseU:0 4844 chr19 55107952 55107952 1 + C T COAD 55107952 + 55107932 55107972 41 GACTCCCTGGAGCTCATGGTCTCAGGTGAGGGCCCTGACCC GACTCCCTGGAGCTCATGGTTTCAGGTGAGGGCCCTGACCC Direct Gain 0 0.95187245470381 0 0.876757979393005 prediction 0.90374490940762 Functional Gain - LILRA1 ENSG00000104974 CDS Human protein_coding chr19:55107952 chr19:55107952 synonymous SNV . 0 21 hPsi_associated_SNPs_105884 0 0 0 0 0 exosome 0 0.43883255326811 0.75351595878601 0 hPsi_site_4844 iPseU_CNN:0.75351595878601;iRNA_PseU:0 4845 chr1 247726901 247726901 1 + G A COAD 247726901 - 247726881 247726921 41 AGTTTTCTTTCAAATGTAGTCATTTCCTGCCTACAAGGAAA AGTTTTCTTTCAAATGTAGTTATTTCCTGCCTACAAGGAAA Direct Gain 0 0.951872384729257 0 0.644945979118347 prediction 0.903744769458514 Functional Gain - GCSAML ENSG00000169224 CDS Human protein_coding chr1:247726901 chr1:247726901 nonsynonymous SNV 0.424 0 21 hPsi_associated_SNPs_105885 0 0 0 0 0 exosome 0 0.438719106218591 0.289891958236694 0 hPsi_site_4845 iPseU_CNN:0.289891958236694;iRNA_PseU:0 4846 chr8 33355977 33355977 1 + G T COAD 33355977 + 33355957 33355997 41 ATAAACTGGATGCCAGCAGTGATGAAGATCAGGATGGTAAA ATAAACTGGATGCCAGCAGTTATGAAGATCAGGATGGTAAA Direct Gain 0 0.951868483666755 0 0.944348812103271 prediction 0.90373696733351 Functional Gain - MAK16 ENSG00000198042 CDS Human protein_coding chr8:33355977 chr8:33355977 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_105886 0 0 1 0 1 Cytosol 0 0.438718593170689 0.888697624206542 0 hPsi_site_4846 iPseU_CNN:0.888697624206542;iRNA_PseU:0 4847 chr5 79355614 79355614 1 + C A UCEC 79355614 - 79355594 79355634 41 CCTCGGAAACATGGGTTGGAGTCACACCGACGAGGTGGGCG CCTCGGAAACATGGGTTGGATTCACACCGACGAGGTGGGCG Direct Gain 0 0.951852204816527 0 0.999844431877136 prediction 0.903704409633053 Functional Gain - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79355614 chr5:79355614 nonsynonymous SNV 0.738 0 21 hPsi_associated_SNPs_105887 0 0 0 0 0 exosome 0 0.456711078414135 0.999688863754272 0 hPsi_site_4847 iPseU_CNN:0.999688863754272;iRNA_PseU:0 4848 chr7 55220240 55220240 1 + G T LUAD 55220240 + 55220220 55220260 41 AACCTTTGCTCTTTTTCAGTGACCAAAATCATCTGTGCCCA AACCTTTGCTCTTTTTCAGTTACCAAAATCATCTGTGCCCA Direct Gain 0 0.951847414576758 0 0.99724280834198 prediction 0.903694829153516 Functional Gain - EGFR ENSG00000146648 CDS Human protein_coding chr7:55220240 chr7:55220240 synonymous SNV . 0 21 hPsi_associated_SNPs_105888 0 0 0 0 1 Nucleus 0 0.435842517434521 0.99448561668396 0 hPsi_site_4848 iPseU_CNN:0.99448561668396;iRNA_PseU:0 4849 chr4 147561554 147561554 1 + C A LUSC 147561554 - 147561534 147561574 41 CGGAGCCCACATCTGCCTGGGTCACCCCCAGCTTGATGCGT CGGAGCCCACATCTGCCTGGTTCACCCCCAGCTTGATGCGT Direct Gain 0 0.951838556805533 0 0.999960720539093 prediction 0.903677113611066 Functional Gain - POU4F2 ENSG00000151615 CDS Human protein_coding chr4:147561554 chr4:147561554 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105889 0 0 0 0 0 unknown 0 0.438717362199577 0.999921441078186 0 hPsi_site_4849 iPseU_CNN:0.999921441078186;iRNA_PseU:0 4850 chr18 12094031 12094031 1 + G T rs11664969 12094031 + 12094011 12094051 41 TTCAGGATGGAGGTCAGGGGGTCGTTCCTGGCGGCCTGCAG TTCAGGATGGAGGTCAGGGGTTCGTTCCTGGCGGCCTGCAG Direct Gain 0 0.951831001326114 0 0.995772063732147 prediction 0.903662002652229 Functional Gain - ANKRD62 ENSG00000181626 CDS Human protein_coding chr18:12094031 chr18:12094031 synonymous SNV . 0 21 hPsi_associated_SNPs_105890 0 0 0 0 0 exosome 0 0.43871859299496 0.991544127464294 0 hPsi_site_4850 iPseU_CNN:0.991544127464294;iRNA_PseU:0 4851 chr10 129869084 129869084 1 + G A LGG 129869084 - 129869064 129869104 41 GTTCTCCTTCATGATCCGGACATTTGTCAATTTCTGCAGCA GTTCTCCTTCATGATCCGGATATTTGTCAATTTCTGCAGCA Direct Gain 0 0.951825956483658 0 0.920390188694 prediction 0.903651912967315 Functional Gain - PTPRE ENSG00000132334 CDS Human protein_coding chr10:129869084 chr10:129869084 nonsynonymous SNV 0.970 1 21 hPsi_associated_SNPs_105891 0 0 0 0 0 Ribosome 0 0.438838251790278 0.840780377388 0 hPsi_site_4851 iPseU_CNN:0.840780377388;iRNA_PseU:0 4852 chr7 142448623 142448623 1 + G A SKCM 142448623 - 142448603 142448643 41 GTCAATGACAAATCCACTCTCATATGTGGCCTCAGAGCCCT GTCAATGACAAATCCACTCTTATATGTGGCCTCAGAGCCCT Direct Gain 0 0.951820795791225 0 0.362846314907074 prediction 0.90364159158245 Functional Gain - MTRNR2L6;PRSS1 ENSG00000232869 CDS Human TR_V_gene chr7:142448623 chr7:142448623 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105892 0 0 0 0 0 unknown 0 0.4387157395839 0 0 hPsi_site_4852 iPseU_CNN:0;iRNA_PseU:0 4853 chr16 19580908 19580908 1 + G A UCEC 19580908 - 19580888 19580928 41 GCTGGGGTGCATTACCATGGCAGCTGCCAAGGCTGCGGGGT GCTGGGGTGCATTACCATGGTAGCTGCCAAGGCTGCGGGGT Direct Gain 0 0.951812255208209 0 0.999789595603943 prediction 0.903624510416418 Functional Gain - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19580908 chr16:19580908 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_105893 0 0 0 0 0 Cytosol 0 0.438623882851013 0.999579191207886 0 hPsi_site_4853 iPseU_CNN:0.999579191207886;iRNA_PseU:0 4854 chr15 54305353 54305353 1 + G A LUSC 54305353 - 54305333 54305373 41 TGTTGGTGAGAGGGAAAACTCTTTACTGGCCTCGTCTTCCT TGTTGGTGAGAGGGAAAACTTTTTACTGGCCTCGTCTTCCT Direct Gain 0 0.95180654804668 0 0.924707293510437 prediction 0.90361309609336 Functional Gain - UNC13C ENSG00000137766 CDS Human protein_coding chr15:54305353 chr15:54305353 nonsynonymous SNV 0.585 1 21 hPsi_associated_SNPs_105894 0 0 0 0 0 exosome 0 0.438718592997901 0.849414587020874 0 hPsi_site_4854 iPseU_CNN:0.849414587020874;iRNA_PseU:0 4855 chr15 25483141 25483141 1 + G A STAD 25483141 - 25483121 25483161 41 GGACAATATAAGGTTCTCATCATCAGCCCAACCCAGGGTAC GGACAATATAAGGTTCTCATTATCAGCCCAACCCAGGGTAC Direct Gain 0 0.951805012595798 0 0.42140144109726 prediction 0.903610025191596 Functional Gain - SNORD115-37 ENSG00000200638 ncRNA_exonic Human snoRNA chr15:25483141 chr15:25483141 . . 0 21 hPsi_associated_SNPs_105895 0 0 0 0 0 unknown 0 0.438722679413842 0 0 hPsi_site_4855 iPseU_CNN:0;iRNA_PseU:0 4856 chr6 30690335 30690335 1 + G A HNSC 30690335 - 30690315 30690355 41 GGTGGGGTCGATGCCATGTTCATCACTGATCACCTCCCAGA GGTGGGGTCGATGCCATGTTTATCACTGATCACCTCCCAGA Direct Gain 0 0.951804945335306 0 0.337823212146759 prediction 0.903609890670613 Functional Gain - TUBB ENSG00000196230 CDS Human protein_coding chr6:30690335 chr6:30690335 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105896 0 0 0 0 0 Cytosol 0 0.43871671561444 0 0 hPsi_site_4856 iPseU_CNN:0;iRNA_PseU:0 4857 chr19 44536227 44536227 1 + C T rs116607330 44536227 + 44536207 44536247 41 GTGATGTTTCCTTCTTTGATCTTCCTCAGCAGTTATATTCA GTGATGTTTCCTTCTTTGATTTTCCTCAGCAGTTATATTCA Direct Gain 0 0.951804906825666 0 0.425824463367462 prediction 0.903609813651332 Functional Gain - ZNF222 ENSG00000159885 CDS Human protein_coding chr19:44536227 chr19:44536227 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_105897 0 0 1 0 0 exosome 0 0.469380377253074 0 0 hPsi_site_4857 iPseU_CNN:0;iRNA_PseU:0 4858 chr5 23509599 23509599 1 + C T rs7714612 23509599 + 23509579 23509619 41 GTCAAAGATGCCTTCAAAGACATTTCCATATACTTCACCAA GTCAAAGATGCCTTCAAAGATATTTCCATATACTTCACCAA Direct Gain 0 0.95178668157591 0 0.883958280086517 prediction 0.903573363151821 Functional Gain - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23509599 chr5:23509599 synonymous SNV . 0 21 hPsi_associated_SNPs_105898 0 0 0 0 1 unknown 0 0.438710967352922 0.767916560173034 0 hPsi_site_4858 iPseU_CNN:0.767916560173034;iRNA_PseU:0 4859 chr11 65269399 65269399 1 + G A BLCA 65269399 - 65269379 65269419 41 GGCATGAGTTTATCTGCAATCATAAACTAAACAATTACCTA GGCATGAGTTTATCTGCAATTATAAACTAAACAATTACCTA Direct Gain 0 0.951777493845818 0 0.857341468334198 prediction 0.903554987691635 Functional Gain - MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269399 chr11:65269399 . . 0 21 hPsi_associated_SNPs_105899 0 0 0 0 0 unknown 0 0.43871859278239 0.714682936668396 0 hPsi_site_4859 iPseU_CNN:0.714682936668396;iRNA_PseU:0 4860 chr10 121587053 121587053 1 + C T CESC 121587053 + 121587033 121587073 41 TTGAACTTGAGACAGGGCTTCATGTAACTCCTTCTCCTTCA TTGAACTTGAGACAGGGCTTTATGTAACTCCTTCTCCTTCA Direct Gain 0 0.95177589316849 0 0.136929929256439 prediction 0.903551786336979 Functional Gain - INPP5F ENSG00000198825 CDS Human protein_coding chr10:121587053 chr10:121587053 nonsynonymous SNV 0.561 0 21 hPsi_associated_SNPs_105900 0 0 0 0 0 Cytosol 0 0.438718605036238 0 0 hPsi_site_4860 iPseU_CNN:0;iRNA_PseU:0 4861 chr12 81004356 81004356 1 + G A rs146199719 81004356 - 81004336 81004376 41 AGCACTTGACTTCCCTTCTACATATGCAGCACTAATGTTCC AGCACTTGACTTCCCTTCTATATATGCAGCACTAATGTTCC Direct Gain 0 0.951773803224066 0 0.998955011367798 prediction 0.903547606448132 Functional Gain - PTPRQ ENSG00000139304 CDS Human protein_coding chr12:81004356 chr12:81004356 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_105901 0 0 0 0 0 exosome 0 0.438718823644524 0.997910022735596 0 hPsi_site_4861 iPseU_CNN:0.997910022735596;iRNA_PseU:0 4862 chr11 47282123 47282123 1 + C T ESCA 47282123 + 47282103 47282143 41 GTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGCCA GTCATCAAGGGAGCGCACTATATCTGCCACAGTGGCGGCCA Direct Gain 0 0.951772371301061 0 0.999017715454102 prediction 0.903544742602121 Functional Gain - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47282123 chr11:47282123 synonymous SNV . 0 21 hPsi_associated_SNPs_105902 0 0 1 0 0 Ribosome 0 0.438770020673269 0.998035430908204 0 hPsi_site_4862 iPseU_CNN:0.998035430908204;iRNA_PseU:0 4863 chr4 494291 494291 1 + G A LUAD 494291 - 494271 494311 41 GTTGTGTAGGGCATAAATTTCACACCCTTTGACCCAAACAC GTTGTGTAGGGCATAAATTTTACACCCTTTGACCCAAACAC Direct Gain 0 0.951770587275688 0 0.998340606689453 prediction 0.903541174551377 Functional Gain - PIGG ENSG00000174227 CDS Human protein_coding chr4:494291 chr4:494291 synonymous SNV . 0 21 hPsi_associated_SNPs_105903 0 0 0 0 0 Nucleus 0 0.438718592920058 0.996681213378906 0 hPsi_site_4863 iPseU_CNN:0.996681213378906;iRNA_PseU:0 4864 chr4 1215310 1215310 1 + G A rs75981314 1215310 - 1215290 1215330 41 GAACACAGCACGATTTGCTTCTCCAGACTCTTGGTGATGCA GAACACAGCACGATTTGCTTTTCCAGACTCTTGGTGATGCA Direct Gain 0 0.9517672319921 0 0.997108578681946 prediction 0.9035344639842 Functional Gain - CTBP1 ENSG00000159692 UTR3 Human protein_coding chr4:1215310 chr4:1215310 . . 0 21 hPsi_associated_SNPs_105904 0 0 1 0 0 Ribosome 0 0.438746619285023 0.994217157363892 0 hPsi_site_4864 iPseU_CNN:0.994217157363892;iRNA_PseU:0 4865 chr11 117253629 117253629 1 + C T BLCA 117253629 + 117253609 117253649 41 CCTGAGGAGAAGGTGGCGGTCAGCCCCACCCCGCCAGTCTC CCTGAGGAGAAGGTGGCGGTTAGCCCCACCCCGCCAGTCTC Direct Gain 0 0.951765528396886 0 0.999971091747284 prediction 0.903531056793771 Functional Gain - CEP164 ENSG00000110274 CDS Human protein_coding chr11:117253629 chr11:117253629 synonymous SNV . 0 21 hPsi_associated_SNPs_105905 0 0 0 0 1 Cytosol 0 0.438716478488635 0.999942183494568 0 hPsi_site_4865 iPseU_CNN:0.999942183494568;iRNA_PseU:0 4866 chr16 30990892 30990892 1 + C A BLCA 30990892 - 30990872 30990912 41 GCAGCCCGCGCCGGGCAGGGGTCAGGGCCAGGTCGGCCAGG GCAGCCCGCGCCGGGCAGGGTTCAGGGCCAGGTCGGCCAGG Direct Gain 0 0.951765368087488 0 0.968558192253113 prediction 0.903530736174976 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990892 chr16:30990892 nonsynonymous SNV 0.664 4 21 hPsi_associated_SNPs_105906 0 0 0 0 0 Cytosol 0 0.438718592995102 0.937116384506226 0 hPsi_site_4866 iPseU_CNN:0.937116384506226;iRNA_PseU:0 4867 chr17 72920961 72920961 1 + C T UCEC 72920961 + 72920941 72920981 41 CTGGCAACGCTCTGGATCCTCTTCTACCTCCTCCGAACCGT CTGGCAACGCTCTGGATCCTTTTCTACCTCCTCCGAACCGT Direct Gain 0 0.951761350067892 0 0.999997019767761 prediction 0.903522700135785 Functional Gain - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72920961 chr17:72920961 synonymous SNV . 0 21 hPsi_associated_SNPs_105907 0 0 0 0 1 exosome 0 0.438718975728792 0.999994039535522 0 hPsi_site_4867 iPseU_CNN:0.999994039535522;iRNA_PseU:0 4868 chr1 16256972 16256972 1 + G A CESC 16256972 - 16256952 16256992 41 ATCTCGCTCACGTAGCTTGTCTTCTCTGTCCCTCAATAAAA ATCTCGCTCACGTAGCTTGTTTTCTCTGTCCCTCAATAAAA Direct Gain 0 0.951754484216439 0 0.999122023582458 prediction 0.903508968432878 Functional Gain - SPEN ENSG00000065526 CDS Human protein_coding chr1:16256972 chr1:16256972 nonsynonymous SNV 0.988 1 21 hPsi_associated_SNPs_105908 0 0 0 0 0 Endoplasmic reticulum 0 0.438718594380696 0.998244047164916 0 hPsi_site_4868 iPseU_CNN:0.998244047164916;iRNA_PseU:0 4869 chr6 155500521 155500521 1 + G A UCEC 155500521 - 155500501 155500541 41 TAGTGGAAAGACTTCTATTTCATCATAAACCTGCAAAAGGT TAGTGGAAAGACTTCTATTTTATCATAAACCTGCAAAAGGT Direct Gain 0 0.951750979659655 0 0.849861025810242 prediction 0.903501959319311 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155500521 chr6:155500521 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_105909 0 0 0 0 0 Cytosol 0 0.438718827484989 0.699722051620484 0 hPsi_site_4869 iPseU_CNN:0.699722051620484;iRNA_PseU:0 4870 chr21 30699682 30699682 1 + G A THYM 30699682 - 30699662 30699702 41 TTCTCTGGCTGAACAGGATTCACTGTCTCCTTCGGTGTCCG TTCTCTGGCTGAACAGGATTTACTGTCTCCTTCGGTGTCCG Direct Gain 0 0.951747202893747 0 0.650492668151855 prediction 0.903494405787494 Functional Gain - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699682 chr21:30699682 nonsynonymous SNV 0.974 3 21 hPsi_associated_SNPs_105910 0 0 0 0 0 Cytosol 0 0.436729322437609 0.30098533630371 0 hPsi_site_4870 iPseU_CNN:0.30098533630371;iRNA_PseU:0 4871 chr11 65161133 65161133 1 + G A HNSC 65161133 - 65161113 65161153 41 GCACTGACCCATGGCCACGTCATCGTCTGGGGCACTGGTGA GCACTGACCCATGGCCACGTTATCGTCTGGGGCACTGGTGA Direct Gain 0 0.951740627359616 0 0.999905824661255 prediction 0.903481254719232 Functional Gain - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65161133 chr11:65161133 nonsynonymous SNV 0.497 3 21 hPsi_associated_SNPs_105911 0 0 0 0 0 Ribosome 0 0.43667571459204 0.99981164932251 0 hPsi_site_4871 iPseU_CNN:0.99981164932251;iRNA_PseU:0 4872 chr17 73229235 73229235 1 + G A LUSC 73229235 - 73229215 73229255 41 ACCCAGGAATGTCAGTCGGTCACTGAGCATCATGGCTGGCC ACCCAGGAATGTCAGTCGGTTACTGAGCATCATGGCTGGCC Direct Gain 0 0.951737318789029 0 0.996973395347595 prediction 0.903474637578059 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73229235 chr17:73229235 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_105912 0 0 0 0 0 Nucleus 0 0.441396949249275 0.99394679069519 0 hPsi_site_4872 iPseU_CNN:0.99394679069519;iRNA_PseU:0 4873 chr22 32439254 32439254 1 + C A rs200443129 32439254 - 32439234 32439274 41 GTCCATGGTGGCAGCGTTGCGTCCTTCCCTCTCGCCAGGGC GTCCATGGTGGCAGCGTTGCTTCCTTCCCTCTCGCCAGGGC Direct Gain 0 0.951729141241432 0 0.995048642158508 prediction 0.903458282482863 Functional Gain - SLC5A1 ENSG00000100170 UTR5 Human protein_coding chr22:32439254 chr22:32439254 . . 0 21 hPsi_associated_SNPs_105913 0 0 0 0 0 Nucleus 0 0.438685965285423 0.990097284317016 0 hPsi_site_4873 iPseU_CNN:0.990097284317016;iRNA_PseU:0 4874 chr2 27279520 27279520 1 + C A UCEC 27279520 - 27279500 27279540 41 AAGTGGGCTGAATTCAAGGAGATGAGCTTTGGATATAGCAT AAGTGGGCTGAATTCAAGGATATGAGCTTTGGATATAGCAT Direct Gain 0 0.951726479786334 0 0.99640941619873 prediction 0.903452959572667 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27279520 chr2:27279520 synonymous SNV . 0 21 hPsi_associated_SNPs_105914 0 0 1 0 0 Cytosol 0 0.438717349379456 0.99281883239746 0 hPsi_site_4874 iPseU_CNN:0.99281883239746;iRNA_PseU:0 4875 chr11 721349 721349 1 + G A UCEC 721349 - 721329 721369 41 CGGGCCCGGGCACCCACCGTCTCCTTCTCTATCTTCTGAGC CGGGCCCGGGCACCCACCGTTTCCTTCTCTATCTTCTGAGC Direct Gain 0 0.951723055607918 0 0.994657278060913 prediction 0.903446111215835 Functional Gain - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:721349 chr11:721349 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_105915 0 0 0 0 0 Cytosol 0 0.438718601423162 0.989314556121826 0 hPsi_site_4875 iPseU_CNN:0.989314556121826;iRNA_PseU:0 4876 chr2 27459290 27459290 1 + C T LUSC 27459290 + 27459270 27459310 41 GTGGAGCTGGGGGCCGGCGTCTCTCTTCCTTTGTCACCAAG GTGGAGCTGGGGGCCGGCGTTTCTCTTCCTTTGTCACCAAG Direct Gain 0 0.95172165779848 0 0.28161433339119 prediction 0.90344331559696 Functional Gain - CAD ENSG00000084774 CDS Human protein_coding chr2:27459290 chr2:27459290 nonsynonymous SNV 0.988 3 21 hPsi_associated_SNPs_105916 0 0 1 0 0 Exosome 0 0.438718608767796 0 0 hPsi_site_4876 iPseU_CNN:0;iRNA_PseU:0 4877 chr9 97783990 97783990 1 + G A rs41316528 97783990 - 97783970 97784010 41 CTAAGATGGGAGACTGTGGTCACACAGCAGGCCCCAGCCCA CTAAGATGGGAGACTGTGGTTACACAGCAGGCCCCAGCCCA Direct Gain 0 0.951715956864083 0 0.109476983547211 prediction 0.903431913728166 Functional Gain - C9orf3 ENSG00000148120 intronic Human protein_coding chr9:97783990 chr9:97783990 . . 0 21 hPsi_associated_SNPs_105917 0 0 0 0 0 Cytosol 0 0.439780228988897 0 0 hPsi_site_4877 iPseU_CNN:0;iRNA_PseU:0 4878 chr6 26091280 26091280 1 + C T LGG 26091280 + 26091260 26091300 41 AGTCTGAAAGGGTGGGATCACATGTTCACTGTTGACTTCTG AGTCTGAAAGGGTGGGATCATATGTTCACTGTTGACTTCTG Direct Gain 0 0.951713543554588 0 0.842243194580078 prediction 0.903427087109177 Functional Gain - HFE ENSG00000010704 CDS Human protein_coding chr6:26091280 chr6:26091280 synonymous SNV . 0 21 hPsi_associated_SNPs_105918 0 0 0 0 0 Endoplasmic reticulum 0 0.43871930854214 0.684486389160156 0 hPsi_site_4878 iPseU_CNN:0.684486389160156;iRNA_PseU:0 4879 chr1 65117914 65117914 1 + G A THCA 65117914 - 65117894 65117934 41 TCAAGAATGTAAGCCAGATTCACGTCCACACCTACAATTCC TCAAGAATGTAAGCCAGATTTACGTCCACACCTACAATTCC Direct Gain 0 0.951708460411162 0 0.994910478591919 prediction 0.903416920822324 Functional Gain - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65117914 chr1:65117914 synonymous SNV . 0 21 hPsi_associated_SNPs_105919 0 0 0 0 0 unknown 0 0.438422075846702 0.989820957183838 0 hPsi_site_4879 iPseU_CNN:0.989820957183838;iRNA_PseU:0 4880 chr10 64913486 64913486 1 + G T UCEC 64913486 + 64913466 64913506 41 AAGTACAGCCCTTCCACAGAGAAATGCCTGCCTGAGATTCA AAGTACAGCCCTTCCACAGATAAATGCCTGCCTGAGATTCA Direct Gain 0 0.951706155951522 0 0.78177273273468 prediction 0.903412311903044 Functional Gain - NRBF2 ENSG00000148572 CDS Human protein_coding chr10:64913486 chr10:64913486 nonsynonymous SNV 0.273 3 21 hPsi_associated_SNPs_105920 0 0 0 0 0 Cytosol 0 0.438722487122852 0.56354546546936 0 hPsi_site_4880 iPseU_CNN:0.56354546546936;iRNA_PseU:0 4881 chr1 171072967 171072967 1 + C T KICH 171072967 + 171072947 171072987 41 GCTAGCATTTACAAATCAGTCTTTTCCAACTCTTCCAAAGA GCTAGCATTTACAAATCAGTTTTTTCCAACTCTTCCAAAGA Direct Gain 0 0.951697080668807 0 0.333746194839478 prediction 0.903394161337613 Functional Gain - FMO3 ENSG00000007933 CDS Human protein_coding chr1:171072967 chr1:171072967 synonymous SNV . 0 21 hPsi_associated_SNPs_105921 0 0 0 0 1 exosome 0 0.43871854670562 0 0 hPsi_site_4881 iPseU_CNN:0;iRNA_PseU:0 4882 chr11 92627111 92627111 1 + G A rs190285306 92627111 - 92627091 92627131 41 CTCTGTGGGCTTGGGCAAGTCTCTTTCCCACTCTGGGTATG CTCTGTGGGCTTGGGCAAGTTTCTTTCCCACTCTGGGTATG Direct Gain 0 0.951688162907475 0 0.999951839447021 prediction 0.903376325814951 Functional Gain - FAT3 ENSG00000165323 UTR3 Human protein_coding chr11:92627111 chr11:92627111 . . 0 21 hPsi_associated_SNPs_105922 0 0 0 0 0 nucleoplasm 0 0.438706810356311 0.999903678894042 0 hPsi_site_4882 iPseU_CNN:0.999903678894042;iRNA_PseU:0 4883 chr5 77755079 77755079 1 + C A COAD 77755079 - 77755059 77755099 41 GGTTGAGACCAGTAAGGGATGAAATCCAACCACTAAAAAGT GGTTGAGACCAGTAAGGGATTAAATCCAACCACTAAAAAGT Direct Gain 0 0.951688097954333 0 0.999848961830139 prediction 0.903376195908666 Functional Gain - SCAMP1 ENSG00000085365 CDS Human protein_coding chr5:77755079 chr5:77755079 stopgain 1.000 0 21 hPsi_associated_SNPs_105923 0 0 0 0 0 Ribosome 0 0.438712140811307 0.999697923660278 0 hPsi_site_4883 iPseU_CNN:0.999697923660278;iRNA_PseU:0 4884 chr7 43484961 43484961 1 + C T LUSC 43484961 + 43484941 43484981 41 AGCGCCAAGATCTCCGAGAGCACGGTCTTCTCCTCGCAAGA AGCGCCAAGATCTCCGAGAGTACGGTCTTCTCCTCGCAAGA Direct Gain 0 0.951683796895751 0 0.999765872955322 prediction 0.903367593791502 Functional Gain - HECW1 ENSG00000002746 CDS Human protein_coding chr7:43484961 chr7:43484961 synonymous SNV . 0 21 hPsi_associated_SNPs_105924 0 0 0 0 0 Cytosol 0 0.438718592991632 0.999531745910644 0 hPsi_site_4884 iPseU_CNN:0.999531745910644;iRNA_PseU:0 4885 chr3 48327757 48327757 1 + G A UCEC 48327757 - 48327737 48327777 41 CCAGGGGCAGGAGCCCTGATCTTGGACTTCCCAGTTCCAGA CCAGGGGCAGGAGCCCTGATTTTGGACTTCCCAGTTCCAGA Direct Gain 0 0.951683377613576 0 0.988541007041931 prediction 0.903366755227152 Functional Gain - ZNF589;FCF1P2 ENSG00000164048 CDS Human protein_coding chr3:48327757 chr3:48327757 nonsynonymous SNV 0.100 0 21 hPsi_associated_SNPs_105925 0 0 0 0 0 unknown 0 0.438718592995173 0.977082014083862 0 hPsi_site_4885 iPseU_CNN:0.977082014083862;iRNA_PseU:0 4886 chr10 81051984 81051984 1 + C T BLCA 81051984 + 81051964 81052004 41 ACCAGGCCGCCTGCTGACTTCACTCAGCCCGCGGCAGCCGC ACCAGGCCGCCTGCTGACTTTACTCAGCCCGCGGCAGCCGC Direct Gain 0 0.951675990649023 0 0.995998859405518 prediction 0.903351981298046 Functional Gain - ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81051984 chr10:81051984 synonymous SNV . 0 21 hPsi_associated_SNPs_105926 0 0 1 0 1 Nucleus 0 0.438717936814919 0.991997718811036 0 hPsi_site_4886 iPseU_CNN:0.991997718811036;iRNA_PseU:0 4887 chr6 160221766 160221766 1 + C A UCEC 160221766 - 160221746 160221786 41 AATAGCAGTCCTCGGGTGCAGAACATCGCCAGCACTCCTCA AATAGCAGTCCTCGGGTGCATAACATCGCCAGCACTCCTCA Direct Gain 0 0.951675464463357 0 0.999691724777222 prediction 0.903350928926714 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160221766 chr6:160221766 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105927 0 0 0 0 0 exosome 0 0.438745893650573 0.999383449554444 0 hPsi_site_4887 iPseU_CNN:0.999383449554444;iRNA_PseU:0 4888 chr10 24816930 24816930 1 + G A SKCM 24816930 - 24816910 24816950 41 TGAGCTTCTTCTAGGAGCTTCTCAAACTCTTTCCCATTATA TGAGCTTCTTCTAGGAGCTTTTCAAACTCTTTCCCATTATA Direct Gain 0 0.95167445937769 0 0.976286351680756 prediction 0.90334891875538 Functional Gain - KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816930 chr10:24816930 synonymous SNV . 0 21 hPsi_associated_SNPs_105928 0 0 0 0 0 Nucleus 0 0.438716219361328 0.952572703361512 0 hPsi_site_4888 iPseU_CNN:0.952572703361512;iRNA_PseU:0 4889 chr11 64940371 64940371 1 + C T LUSC 64940371 + 64940351 64940391 41 CTTCTCTGACCTCTGAATGTCATCGCCCTCCCTCCCAAAAT CTTCTCTGACCTCTGAATGTTATCGCCCTCCCTCCCAAAAT Direct Gain 0 0.951664887225969 0 0.963224649429321 prediction 0.903329774451938 Functional Gain - SPDYC ENSG00000204710 CDS Human protein_coding chr11:64940371 chr11:64940371 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_105929 0 0 0 0 0 nucleolus 0 0.438782942615706 0.926449298858642 0 hPsi_site_4889 iPseU_CNN:0.926449298858642;iRNA_PseU:0 4890 chr7 91709233 91709233 1 + G A BLCA 91709233 - 91709213 91709253 41 TGATATATCTGACCCCAACTCATCTTCTCTTAGTTGATTTA TGATATATCTGACCCCAACTTATCTTCTCTTAGTTGATTTA Direct Gain 0 0.951663160143085 0 0.885890901088715 prediction 0.90332632028617 Functional Gain - AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91709233 chr7:91709233 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_105930 0 0 0 0 0 Nucleus 0 0.438718491811676 0.77178180217743 0 hPsi_site_4890 iPseU_CNN:0.77178180217743;iRNA_PseU:0 4891 chr20 44003672 44003672 1 + C T rs115998555 44003672 + 44003652 44003692 41 GCCTGGCAGTGTTGTTGTCACACCCACCTTGTATGGATGCC GCCTGGCAGTGTTGTTGTCATACCCACCTTGTATGGATGCC Direct Gain 0 0.951661847955547 0 0.949333548545837 prediction 0.903323695911094 Functional Gain - SYS1-DBNDD2 ENSG00000204070 UTR3 Human protein_coding chr20:44003672 chr20:44003672 . . 0 21 hPsi_associated_SNPs_105931 0 0 0 2 0 exosome 0 0.438718943382279 0.898667097091674 0 hPsi_site_4891 iPseU_CNN:0.898667097091674;iRNA_PseU:0 4892 chr11 99872838 99872838 1 + C A LIHC 99872838 - 99872818 99872858 41 CAAAGCATTCCATCTTAACAGTTGTTCCTTTAGCAGCTGTA CAAAGCATTCCATCTTAACATTTGTTCCTTTAGCAGCTGTA Direct Gain 0 0.951657742652168 0 0.99999988079071 prediction 0.903315485304336 Functional Gain - CNTN5 ENSG00000149972 CDS Human protein_coding chr11:99872838 chr11:99872838 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_105932 0 0 0 0 0 Endoplasmic reticulum 0 0.438642431868107 0.99999976158142 0 hPsi_site_4892 iPseU_CNN:0.99999976158142;iRNA_PseU:0 4893 chr15 25448428 25448428 1 + C T SKCM 25448428 + 25448408 25448448 41 AGAGGTGATGACTTAAAAATCATTCTCAAAAGGATTATGCT AGAGGTGATGACTTAAAAATTATTCTCAAAAGGATTATGCT Direct Gain 0 0.951656662220457 0 0.513595283031464 prediction 0.903313324440914 Functional Gain - SNORD115-17;SNORD115-18;SNORD115-19 ENSG00000200163 ncRNA_exonic Human snoRNA chr15:25448428 chr15:25448428 . . 0 21 hPsi_associated_SNPs_105933 0 0 0 0 0 unknown 0 0.438724459139212 0.0271905660629279 0 hPsi_site_4893 iPseU_CNN:0.0271905660629279;iRNA_PseU:0 4894 chr15 41193186 41193186 1 + G A HNSC 41193186 - 41193166 41193206 41 GGCCAGGTCCACGGCCTCCTCATACAGCTCTAGGACCTTGT GGCCAGGTCCACGGCCTCCTTATACAGCTCTAGGACCTTGT Direct Gain 0 0.951655664071414 0 0.960880994796753 prediction 0.903311328142827 Functional Gain - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41193186 chr15:41193186 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_105934 0 0 0 0 0 chromatin 0 0.43871859298814 0.921761989593506 0 hPsi_site_4894 iPseU_CNN:0.921761989593506;iRNA_PseU:0 4895 chr12 108102971 108102971 1 + G T UCEC 108102971 + 108102951 108102991 41 AGATCTGGGACATCTTAGGAGATAGGCCAAGTCTAGTTCAT AGATCTGGGACATCTTAGGATATAGGCCAAGTCTAGTTCAT Direct Gain 0 0.95165259301593 0 0.998508095741272 prediction 0.903305186031859 Functional Gain - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108102971 chr12:108102971 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105935 0 0 1 0 2 Ribosome 0 0.438718592739208 0.997016191482544 0 hPsi_site_4895 iPseU_CNN:0.997016191482544;iRNA_PseU:0 4896 chr4 134073432 134073432 1 + G A LUAD 134073432 - 134073412 134073452 41 GATGAGGATGAGGGTGAGGTCTAGCGAGGTTTCCCCGCCGC GATGAGGATGAGGGTGAGGTTTAGCGAGGTTTCCCCGCCGC Direct Gain 0 0.951644912324673 0 0.4236761033535 prediction 0.903289824649347 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073432 chr4:134073432 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_105936 0 0 0 0 0 cytosol 0 0.4387176691372 0 0 hPsi_site_4896 iPseU_CNN:0;iRNA_PseU:0 4897 chr15 39874516 39874516 1 + G A GBM 39874516 - 39874496 39874536 41 CACAGGGGGGATCAGGTTGGCATCCTCGATGCGGAAAGCTG CACAGGGGGGATCAGGTTGGTATCCTCGATGCGGAAAGCTG Direct Gain 0 0.951643589142133 0 0.999407768249512 prediction 0.903287178284266 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874516 chr15:39874516 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105937 0 0 0 0 0 cytosol 0 0.438719301821838 0.998815536499024 0 hPsi_site_4897 iPseU_CNN:0.998815536499024;iRNA_PseU:0 4898 chr11 119024743 119024743 1 + G A SARC 119024743 - 119024723 119024763 41 GAGAGGCACTTGAGAAGGGTCTTATAACCTGCAGTGAGGTG GAGAGGCACTTGAGAAGGGTTTTATAACCTGCAGTGAGGTG Direct Gain 0 0.951643329491779 0 0.00108712911605835 prediction 0.903286658983559 Functional Gain - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119024743 chr11:119024743 synonymous SNV . 0 21 hPsi_associated_SNPs_105938 0 0 0 0 0 exosome 0 0.438712106577319 0 0 hPsi_site_4898 iPseU_CNN:0;iRNA_PseU:0 4899 chr16 89293372 89293372 1 + G T SARC 89293372 + 89293352 89293392 41 GCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAA GCACTCGGGACAGATCTCTTTACTACAGCAGCTGTGGGGAA Direct Gain 0 0.951638049004824 0 0.974816143512726 prediction 0.903276098009648 Functional Gain - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89293372 chr16:89293372 nonsynonymous SNV 0.006 2 21 hPsi_associated_SNPs_105939 0 0 1 0 0 chromatin 0 0.438718659824737 0.949632287025452 0 hPsi_site_4899 iPseU_CNN:0.949632287025452;iRNA_PseU:0 4900 chr2 100867822 100867822 1 + G A rs543325626 100867822 - 100867802 100867842 41 TGAGTAGCTGGGACTCCAGGCACATGCCACCACACCCAGCT TGAGTAGCTGGGACTCCAGGTACATGCCACCACACCCAGCT Direct Gain 0 0.951631376888702 0 0.999997496604919 prediction 0.903262753777403 Functional Gain - LINC01104 ENSG00000232084 ncRNA_exonic Human lincRNA chr2:100867822 chr2:100867822 . . 0 21 hPsi_associated_SNPs_105940 0 0 0 0 0 unknown 0 0.437695802913806 0.999994993209838 0 hPsi_site_4900 iPseU_CNN:0.999994993209838;iRNA_PseU:0 4901 chr20 57251299 57251299 1 + C T BLCA 57251299 + 57251279 57251319 41 GTGATTTTAATATTATTTGTCATCATCATTGTGCTCATTGT GTGATTTTAATATTATTTGTTATCATCATTGTGCTCATTGT Direct Gain 0 0.951621573032699 0 0.684348464012146 prediction 0.903243146065397 Functional Gain - STX16 ENSG00000124222 CDS Human protein_coding chr20:57251299 chr20:57251299 synonymous SNV . 0 21 hPsi_associated_SNPs_105941 0 0 1 0 1 Endoplasmic reticulum 0 0.438319395643603 0.368696928024292 0 hPsi_site_4901 iPseU_CNN:0.368696928024292;iRNA_PseU:0 4902 chr10 97631505 97631505 1 + C A rs146979297 97631505 - 97631485 97631525 41 AACAAGTCAACTCTAGTGCTGATGAGGGTGATCATCATCAC AACAAGTCAACTCTAGTGCTTATGAGGGTGATCATCATCAC Direct Gain 0 0.951620300053875 0 0.308468401432037 prediction 0.90324060010775 Functional Gain - ENTPD1-AS1 ENSG00000226688;ENSG00000240527 ncRNA_intronic Human other chr10:97631505 chr10:97631505 . . 0 21 hPsi_associated_SNPs_105942 0 0 1 0 0 unknown 0 0.438719026714797 0 0 hPsi_site_4902 iPseU_CNN:0;iRNA_PseU:0 4903 chr19 39075702 39075702 1 + C T HNSC 39075702 + 39075682 39075722 41 GTCTTCGACATCACCTTCTTCTTCTTCGTCATCGTCATCCT GTCTTCGACATCACCTTCTTTTTCTTCGTCATCGTCATCCT Direct Gain 0 0.951620162080799 0 0.998858332633972 prediction 0.903240324161599 Functional Gain - RYR1 ENSG00000196218 CDS Human protein_coding chr19:39075702 chr19:39075702 synonymous SNV . 0 21 hPsi_associated_SNPs_105943 0 0 0 0 0 chromatin 0 0.438869199544415 0.997716665267944 0 hPsi_site_4903 iPseU_CNN:0.997716665267944;iRNA_PseU:0 4904 chr20 43547557 43547557 1 + C T SARC 43547557 + 43547537 43547577 41 ATGTCCACAGCTTTGTGGGTCACTTCAAGTCTCGACGGGAG ATGTCCACAGCTTTGTGGGTTACTTCAAGTCTCGACGGGAG Direct Gain 0 0.951616460949813 0 0.999999463558197 prediction 0.903232921899625 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547557 chr20:43547557 nonsynonymous SNV 0.987 2 21 hPsi_associated_SNPs_105944 0 0 1 0 1 chromatin 0 0.43871860392997 0.999998927116394 0 hPsi_site_4904 iPseU_CNN:0.999998927116394;iRNA_PseU:0 4905 chr17 40818189 40818189 1 + G A UCEC 40818189 - 40818169 40818209 41 GCAGTGGTTGGTCTGGCGGTCTCGGCCTGTGGACACCATCA GCAGTGGTTGGTCTGGCGGTTTCGGCCTGTGGACACCATCA Direct Gain 0 0.951609382783382 0 0.996665596961975 prediction 0.903218765566763 Functional Gain - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40818189 chr17:40818189 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105945 0 0 0 0 0 Cytosol 0 0.436965862587953 0.99333119392395 0 hPsi_site_4905 iPseU_CNN:0.99333119392395;iRNA_PseU:0 4906 chr19 45375390 45375390 1 + G A BLCA 45375390 - 45375370 45375410 41 TCACAGCGTACAGAGAGGGTCACAGGTATCAGGGCTGGTTC TCACAGCGTACAGAGAGGGTTACAGGTATCAGGGCTGGTTC Direct Gain 0 0.951607682678615 0 0.999250471591949 prediction 0.903215365357229 Functional Gain - NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375390 chr19:45375390 synonymous SNV . 0 21 hPsi_associated_SNPs_105946 0 0 0 0 0 Ribosome 0 0.428064280736689 0.998500943183898 0 hPsi_site_4906 iPseU_CNN:0.998500943183898;iRNA_PseU:0 4907 chr2 242089958 242089958 1 + G A UCEC 242089958 - 242089938 242089978 41 CGCAGGGGCCGCTCACCCTCCATCATCTCCTGCGACTGTTG CGCAGGGGCCGCTCACCCTCTATCATCTCCTGCGACTGTTG Direct Gain 0 0.951606656667079 0 0.96425998210907 prediction 0.903213313334158 Functional Gain - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242089958 chr2:242089958 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_105947 0 0 0 0 0 Ribosome 0 0.438721374332863 0.92851996421814 0 hPsi_site_4907 iPseU_CNN:0.92851996421814;iRNA_PseU:0 4908 chr17 40946850 40946850 1 + C T STAD 40946850 + 40946830 40946870 41 GACAGCCTTCTCCACCTCCTCATCTTCTCCTGGAACTCCTT GACAGCCTTCTCCACCTCCTTATCTTCTCCTGGAACTCCTT Direct Gain 0 0.951603347652588 0 0.991528809070587 prediction 0.903206695305175 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40946850 chr17:40946850 nonsynonymous SNV 0.783 0 21 hPsi_associated_SNPs_105948 0 0 1 0 1 chromatin 0 0.43871859049076 0.983057618141174 0 hPsi_site_4908 iPseU_CNN:0.983057618141174;iRNA_PseU:0 4909 chr12 104140477 104140477 1 + G A STAD 104140477 - 104140457 104140497 41 ACAAAGGTGGCTTACCTGTGCATGTGATTCCGTCACCTTCA ACAAAGGTGGCTTACCTGTGTATGTGATTCCGTCACCTTCA Direct Gain 0 0.951602421770724 0 0.97384774684906 prediction 0.903204843541447 Functional Gain - STAB2 ENSG00000136011 CDS Human protein_coding chr12:104140477 chr12:104140477 nonsynonymous SNV 0.995 5 21 hPsi_associated_SNPs_105949 0 0 0 0 0 nucleoplasm 0 0.438718482184872 0.94769549369812 0 hPsi_site_4909 iPseU_CNN:0.94769549369812;iRNA_PseU:0 4910 chr19 55247512 55247512 1 + C T SKCM 55247512 + 55247492 55247532 41 GTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGCC GTTTTCACACAGAGAAAAATTACTCGCCCTTCTCAGAGGCC Direct Gain 0 0.951598831471227 0 0.490135610103607 prediction 0.903197662942453 Functional Gain - KIR3DL3 ENSG00000242019 CDS Human protein_coding chr19:55247512 chr19:55247512 synonymous SNV . 0 21 hPsi_associated_SNPs_105950 0 0 0 0 1 unknown 0 0.438720636085584 0 0 hPsi_site_4910 iPseU_CNN:0;iRNA_PseU:0 4911 chr19 22779151 22779151 1 + C A rs56051913 22779151 - 22779131 22779171 41 AGGGCGGGAAGGGAGGTGGGGTTGGGGCCACATCAGCTCTA AGGGCGGGAAGGGAGGTGGGTTTGGGGCCACATCAGCTCTA Direct Gain 0 0.951597074510076 0 0.983068645000458 prediction 0.903194149020151 Functional Gain - GOLGA2P9 ENSG00000269332 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:22779151 chr19:22779151 . . 0 21 hPsi_associated_SNPs_105951 0 0 0 0 0 unknown 0 0.438715570152568 0.966137290000916 0 hPsi_site_4911 iPseU_CNN:0.966137290000916;iRNA_PseU:0 4912 chr1 248637404 248637404 1 + C T SKCM 248637404 + 248637384 248637424 41 ACCTGCTCCTCCCACATGATCATAGTGCTGCTGCTCTTCGG ACCTGCTCCTCCCACATGATTATAGTGCTGCTGCTCTTCGG Direct Gain 0 0.951595169796404 0 0.901086211204529 prediction 0.903190339592809 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248637404 chr1:248637404 synonymous SNV . 0 21 hPsi_associated_SNPs_105952 0 0 0 0 0 unknown 0 0.438843600156348 0.802172422409058 0 hPsi_site_4912 iPseU_CNN:0.802172422409058;iRNA_PseU:0 4913 chr7 117175454 117175454 1 + G A STAD 117175454 - 117175434 117175474 41 GGTTGCTACCTGTACTTCATCATCATTCTCCCTAGCCCAGC GGTTGCTACCTGTACTTCATTATCATTCTCCCTAGCCCAGC Direct Gain 0 0.951593497783768 0 0.390193462371826 prediction 0.903186995567536 Functional Gain - CFTR ENSG00000001626 CDS Human protein_coding chr7:117175454 chr7:117175454 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_105953 0 0 0 0 0 exosome 0 0.438718592995088 0 0 hPsi_site_4913 iPseU_CNN:0;iRNA_PseU:0 4914 chr5 140187689 140187689 1 + G T LUSC 140187689 + 140187669 140187709 41 TGGACAAATTATTGTAAAGGGATATATTGACTTTGAAGAAA TGGACAAATTATTGTAAAGGTATATATTGACTTTGAAGAAA Direct Gain 0 0.951590744694701 0 0.000347226858139038 prediction 0.903181489389402 Functional Gain - PCDHA4 ENSG00000204967 CDS Human protein_coding chr5:140187689 chr5:140187689 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_105954 0 0 0 0 0 insoluble cytoplasm 0 0.438718814525489 0 0 hPsi_site_4914 iPseU_CNN:0;iRNA_PseU:0 4915 chr2 1488512 1488512 1 + G A rs28910612 1488512 - 1488492 1488532 41 CACCAGCGGGTGGATCGTGGCATGGCCGAAGCGGAAGGCGG CACCAGCGGGTGGATCGTGGTATGGCCGAAGCGGAAGGCGG Direct Gain 0 0.951590160026982 0 0.999997854232788 prediction 0.903180320053964 Functional Gain - TPO ENSG00000115705 CDS Human protein_coding chr2:1488512 chr2:1488512 nonsynonymous SNV 0.018 3 21 hPsi_associated_SNPs_105955 0 0 0 0 0 exosome 0 0.438728152424413 0.999995708465576 0 hPsi_site_4915 iPseU_CNN:0.999995708465576;iRNA_PseU:0 4916 chr20 13071780 13071780 1 + G A SKCM 13071780 - 13071760 13071800 41 ACCATAGCTGCTTCCACATTCAGGAACTTAGCCACAAGGTC ACCATAGCTGCTTCCACATTTAGGAACTTAGCCACAAGGTC Direct Gain 0 0.951589427953497 0 0.991306841373444 prediction 0.903178855906994 Functional Gain - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13071780 chr20:13071780 synonymous SNV . 0 21 hPsi_associated_SNPs_105956 0 0 0 0 0 cytosol 0 0.43877404495597 0.982613682746888 0 hPsi_site_4916 iPseU_CNN:0.982613682746888;iRNA_PseU:0 4917 chrX 152617630 152617630 1 + C T rs183067536 152617630 + 152617610 152617650 41 GGATTTCTGGCAGCAGCCCTCATTGGTCCACGTGCGTCCCC GGATTTCTGGCAGCAGCCCTTATTGGTCCACGTGCGTCCCC Direct Gain 0 0.95158844437243 0 0.165303021669388 prediction 0.903176888744859 Functional Gain - LOC105373378 ENSG00000063587 UTR3 Human protein_coding chrX:152617630 chrX:152617630 . . 0 21 hPsi_associated_SNPs_105957 0 0 1 0 0 unknown 0 0.438754298682606 0 0 hPsi_site_4917 iPseU_CNN:0;iRNA_PseU:0 4918 chr11 65061661 65061661 1 + G T GBM 65061661 + 65061641 65061681 41 TCTTTGTCCCGTCATTGAGAGATGTGCACCATGAGCCTGTG TCTTTGTCCCGTCATTGAGATATGTGCACCATGAGCCTGTG Direct Gain 0 0.951574029441589 0 0.997563362121582 prediction 0.903148058883177 Functional Gain - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65061661 chr11:65061661 nonsynonymous SNV 0.975 4 21 hPsi_associated_SNPs_105958 0 0 1 0 2 Endoplasmic reticulum 0 0.438828713071358 0.995126724243164 0 hPsi_site_4918 iPseU_CNN:0.995126724243164;iRNA_PseU:0 4919 chr10 95849043 95849043 1 + G A LUAD 95849043 - 95849023 95849063 41 GGGAAGAGCCAACCAACCTTCAAGACAGCTGAGAGCGTGCA GGGAAGAGCCAACCAACCTTTAAGACAGCTGAGAGCGTGCA Direct Gain 0 0.951571926978779 0 0.994665026664734 prediction 0.903143853957557 Functional Gain - PLCE1 ENSG00000138193 CDS Human protein_coding chr10:95849043 chr10:95849043 synonymous SNV . 0 21 hPsi_associated_SNPs_105959 0 0 0 0 0 nucleoplasm 0 0.438718592257236 0.989330053329468 0 hPsi_site_4919 iPseU_CNN:0.989330053329468;iRNA_PseU:0 4920 chr20 56139386 56139386 1 + G A LIHC 56139386 - 56139366 56139406 41 GACACCTGAAGCTAGCGGCTCATCAATGCCTTCCCAGTAAA GACACCTGAAGCTAGCGGCTTATCAATGCCTTCCCAGTAAA Direct Gain 0 0.951570518616256 0 0.684518158435822 prediction 0.903141037232511 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56139386 chr20:56139386 nonsynonymous SNV 0.088 1 21 hPsi_associated_SNPs_105960 0 0 0 0 0 exosome 0 0.438718588207883 0.369036316871644 0 hPsi_site_4920 iPseU_CNN:0.369036316871644;iRNA_PseU:0 4921 chr12 49221515 49221515 1 + G A UCEC 49221515 - 49221495 49221535 41 CAGGTCCTGGTAGGCATCTGCATAGTCCTCCTCCAGGTGGC CAGGTCCTGGTAGGCATCTGTATAGTCCTCCTCCAGGTGGC Direct Gain 0 0.951567504563999 0 0.999595999717712 prediction 0.903135009127999 Functional Gain - CACNB3 ENSG00000167535 CDS Human protein_coding chr12:49221515 chr12:49221515 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_105961 0 0 0 0 0 Ribosome 0 0.438718592995346 0.999191999435424 0 hPsi_site_4921 iPseU_CNN:0.999191999435424;iRNA_PseU:0 4922 chr7 141731507 141731507 1 + G T LIHC 141731507 + 141731487 141731527 41 CTGGACAAACTGTGTTTCCTGATTATACCAATCCCAACTGT CTGGACAAACTGTGTTTCCTTATTATACCAATCCCAACTGT Direct Gain 0 0.95156607191106 0 0.933687627315521 prediction 0.90313214382212 Functional Gain - MGAM ENSG00000257335 CDS Human protein_coding chr7:141731507 chr7:141731507 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_105962 0 0 0 0 2 Cytosol 0 0.438718592992363 0.867375254631042 0 hPsi_site_4922 iPseU_CNN:0.867375254631042;iRNA_PseU:0 4923 chr17 9774075 9774075 1 + C T SKCM 9774075 + 9774055 9774095 41 TTTTTCAAGGTCAATTTCTTCATCTTCCTGAAAATTCTCAA TTTTTCAAGGTCAATTTCTTTATCTTCCTGAAAATTCTCAA Direct Gain 0 0.951563579694862 0 0.994942307472229 prediction 0.903127159389725 Functional Gain - GLP2R ENSG00000065325 CDS Human protein_coding chr17:9774075 chr17:9774075 synonymous SNV . 0 21 hPsi_associated_SNPs_105963 0 0 0 0 2 nucleus 0 0.438675980958633 0.989884614944458 0 hPsi_site_4923 iPseU_CNN:0.989884614944458;iRNA_PseU:0 4924 chr11 86521689 86521689 1 + T A rs115942293 86521689 - 86521669 86521709 41 AAAGGAACATCTATTTTTTTAAAAAAATCCATTCTGGTCTT AAAGGAACATCTATTTTTTTTAAAAAATCCATTCTGGTCTT Direct Gain 0 0.951558813072128 0 0.00489521026611328 prediction 0.903117626144255 Functional Gain - PRSS23 ENSG00000150687 UTR3 Human protein_coding chr11:86521689 chr11:86521689 . . 0 21 hPsi_associated_SNPs_105964 0 0 0 0 0 Ribosome 0 0.438717069100393 0 0 hPsi_site_4924 iPseU_CNN:0;iRNA_PseU:0 4925 chr1 87033149 87033149 1 + T A SKCM 87033149 - 87033129 87033169 41 TTCAACAGTCTGCAGCAGGAAATGTTTTGCTGCTTGATTCA TTCAACAGTCTGCAGCAGGATATGTTTTGCTGCTTGATTCA Direct Gain 0 0.95155798995208 0 0.960538148880005 prediction 0.903115979904159 Functional Gain - CLCA4 ENSG00000016602 CDS Human protein_coding chr1:87033149 chr1:87033149 nonsynonymous SNV 0.023 4 21 hPsi_associated_SNPs_105965 0 0 0 0 0 unknown 0 0.439625585575761 0.92107629776001 0 hPsi_site_4925 iPseU_CNN:0.92107629776001;iRNA_PseU:0 4926 chr8 61769280 61769280 1 + C T SKCM 61769280 + 61769260 61769300 41 TGTCTGATGCCTTTAAGACTCAAATGGAACTGCTCCAAGCA TGTCTGATGCCTTTAAGACTTAAATGGAACTGCTCCAAGCA Direct Gain 0 0.951550702419454 0 0.999989807605743 prediction 0.903101404838909 Functional Gain - CHD7 ENSG00000171316 CDS Human protein_coding chr8:61769280 chr8:61769280 stopgain 1.000 0 21 hPsi_associated_SNPs_105966 0 0 1 0 0 Cytosol 0 0.438718394451859 0.999979615211486 0 hPsi_site_4926 iPseU_CNN:0.999979615211486;iRNA_PseU:0 4927 chr19 3121081 3121081 1 + C T BLCA 3121081 + 3121061 3121101 41 AAGATCATCTACTCACACTTCACGTGTGCCACCGACACGGA AAGATCATCTACTCACACTTTACGTGTGCCACCGACACGGA Direct Gain 0 0.951550686793447 0 0.931180834770203 prediction 0.903101373586894 Functional Gain - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3121081 chr19:3121081 synonymous SNV . 0 21 hPsi_associated_SNPs_105967 0 0 1 0 1 Cytosol 0 0.438883360052143 0.862361669540406 0 hPsi_site_4927 iPseU_CNN:0.862361669540406;iRNA_PseU:0 4928 chr12 113448232 113448232 1 + G T COAD 113448232 + 113448212 113448252 41 ATCCATCCTATTGTCAATGAGATGTTCTCATCCAGAAGCCA ATCCATCCTATTGTCAATGATATGTTCTCATCCAGAAGCCA Direct Gain 0 0.951549756714189 0 0.995408415794373 prediction 0.903099513428378 Functional Gain - OAS2 ENSG00000111335 CDS Human protein_coding chr12:113448232 chr12:113448232 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_105968 0 0 0 5 1 exosome 0 0.438718699579988 0.990816831588746 0 hPsi_site_4928 iPseU_CNN:0.990816831588746;iRNA_PseU:0 4929 chr12 8976376 8976376 1 + A T UCEC 8976376 + 8976356 8976396 41 TCCGGGTGTCGGGAGTTGGAAATAACATCAGCTTTGAGGAG TCCGGGTGTCGGGAGTTGGATATAACATCAGCTTTGAGGAG Direct Gain 0 0.951548214799656 0 0.690978288650513 prediction 0.903096429599312 Functional Gain - A2ML1 ENSG00000166535 CDS Human protein_coding chr12:8976376 chr12:8976376 nonsynonymous SNV 0.140 1 21 hPsi_associated_SNPs_105969 0 0 0 0 1 exosome 0 0.438718591332195 0.381956577301026 0 hPsi_site_4929 iPseU_CNN:0.381956577301026;iRNA_PseU:0 4930 chr11 59224794 59224794 1 + G A BLCA 59224794 - 59224774 59224814 41 GGCGATTGCAAGGTATCTGTCATAGGCCATCACAGAGAGGA GGCGATTGCAAGGTATCTGTTATAGGCCATCACAGAGAGGA Direct Gain 0 0.951547542244078 0 0.999783515930176 prediction 0.903095084488157 Functional Gain - OR4D6 ENSG00000166884 CDS Human protein_coding chr11:59224794 chr11:59224794 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_105970 0 0 0 0 0 unknown 0 0.442835677723821 0.999567031860352 0 hPsi_site_4930 iPseU_CNN:0.999567031860352;iRNA_PseU:0 4931 chrX 11781934 11781934 1 + G A BLCA 11781934 - 11781914 11781954 41 GAGTGTAATCAAAGGTTATTCTTAATCCATCCACCATCTCC GAGTGTAATCAAAGGTTATTTTTAATCCATCCACCATCTCC Direct Gain 0 0.951538076308023 0 0.923040866851807 prediction 0.903076152616046 Functional Gain - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11781934 chrX:11781934 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_105971 0 0 0 0 0 Cytosol 0 0.438717819546645 0.846081733703614 0 hPsi_site_4931 iPseU_CNN:0.846081733703614;iRNA_PseU:0 4932 chr8 73480086 73480086 1 + C A STAD 73480086 - 73480066 73480106 41 TGGTTGAGGCCCCCCACATTGATCTTAACTCTCCTGGAGCA TGGTTGAGGCCCCCCACATTTATCTTAACTCTCCTGGAGCA Direct Gain 0 0.951533594794716 0 0.3378786444664 prediction 0.903067189589432 Functional Gain - KCNB2 ENSG00000182674 CDS Human protein_coding chr8:73480086 chr8:73480086 synonymous SNV . 0 21 hPsi_associated_SNPs_105972 0 0 0 0 0 exosome 0 0.438718798908769 0 0 hPsi_site_4932 iPseU_CNN:0;iRNA_PseU:0 4933 chr3 51978469 51978469 1 + G A LUAD 51978469 - 51978449 51978489 41 CTTTTCCCGAAATTTCTTCTCAAAGTCCTTCTTTGCATCTT CTTTTCCCGAAATTTCTTCTTAAAGTCCTTCTTTGCATCTT Direct Gain 0 0.95153320397224 0 0.802313268184662 prediction 0.903066407944481 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978469 chr3:51978469 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_105973 0 0 0 0 0 nucleus 0 0.438717709760861 0.604626536369324 0 hPsi_site_4933 iPseU_CNN:0.604626536369324;iRNA_PseU:0 4934 chr16 732373 732373 1 + C T BLCA 732373 + 732353 732393 41 TGTCACTGCAGCGTGTGGGTCATTTTGACCCCGTGACCCGG TGTCACTGCAGCGTGTGGGTTATTTTGACCCCGTGACCCGG Direct Gain 0 0.951528275818671 0 0.986799240112305 prediction 0.903056551637341 Functional Gain - STUB1 ENSG00000103266 CDS Human protein_coding chr16:732373 chr16:732373 nonsynonymous SNV 0.878 4 21 hPsi_associated_SNPs_105974 0 0 1 0 0 Endoplasmic reticulum 0 0.438977510066552 0.97359848022461 0 hPsi_site_4934 iPseU_CNN:0.97359848022461;iRNA_PseU:0 4935 chr14 23345363 23345363 1 + C T ACC 23345363 + 23345343 23345383 41 TGTCGGCATTGCCAGCCTGGCAATTTCCGATGCCGGGACGA TGTCGGCATTGCCAGCCTGGTAATTTCCGATGCCGGGACGA Direct Gain 0 0.951527866501811 0 0.952408313751221 prediction 0.903055733003622 Functional Gain - LRP10 ENSG00000197324 CDS Human protein_coding chr14:23345363 chr14:23345363 synonymous SNV . 0 21 hPsi_associated_SNPs_105975 0 0 1 0 0 Ribosome 0 0.438733074823267 0.904816627502442 0 hPsi_site_4935 iPseU_CNN:0.904816627502442;iRNA_PseU:0 4936 chr16 22826363 22826363 1 + C T BLCA 22826363 + 22826343 22826383 41 CCGGACGTGCGGGCCTTGGGCACGGAACCCCACTTCTTTGA CCGGACGTGCGGGCCTTGGGTACGGAACCCCACTTCTTTGA Direct Gain 0 0.951520834923868 0 0.999942123889923 prediction 0.903041669847735 Functional Gain - HS3ST2 ENSG00000122254 CDS Human protein_coding chr16:22826363 chr16:22826363 synonymous SNV . 0 21 hPsi_associated_SNPs_105976 0 0 0 0 1 exosome 0 0.438718592995102 0.999884247779846 0 hPsi_site_4936 iPseU_CNN:0.999884247779846;iRNA_PseU:0 4937 chr9 138378672 138378672 1 + C T UCEC 138378672 + 138378652 138378692 41 GGGAAGAAACCCCCCAGTGTCTTTGGCAGCACGGCAGAGAG GGGAAGAAACCCCCCAGTGTTTTTGGCAGCACGGCAGAGAG Direct Gain 0 0.951515631578082 0 0.418440669775009 prediction 0.903031263156164 Functional Gain - PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378672 chr9:138378672 synonymous SNV . 0 21 hPsi_associated_SNPs_105977 0 0 0 0 0 Ribosome 0 0.438718196013647 0 0 hPsi_site_4937 iPseU_CNN:0;iRNA_PseU:0 4938 chr3 122437451 122437451 1 + A T SKCM 122437451 + 122437431 122437471 41 TGCAGAAGAAGTTAAATATTAACATTTCCCTGGACCATAAG TGCAGAAGAAGTTAAATATTTACATTTCCCTGGACCATAAG Direct Gain 0 0.951515423781935 0 0.999888777732849 prediction 0.90303084756387 Functional Gain - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122437451 chr3:122437451 nonsynonymous SNV 0.203 0 21 hPsi_associated_SNPs_105978 0 0 0 0 0 Nucleus 0 0.438718647486983 0.999777555465698 0 hPsi_site_4938 iPseU_CNN:0.999777555465698;iRNA_PseU:0 4939 chr11 94730376 94730376 1 + G A rs116860989 94730376 - 94730356 94730396 41 AGATGATAATCTTTCTTGGGCTTGTTTATTCACTAGTGAGA AGATGATAATCTTTCTTGGGTTTGTTTATTCACTAGTGAGA Direct Gain 0 0.951512654477124 0 0.0320019125938416 prediction 0.903025308954247 Functional Gain - KDM4D ENSG00000186280 UTR5 Human protein_coding chr11:94730376 chr11:94730376 . . 0 21 hPsi_associated_SNPs_105979 0 0 0 0 0 chromatin 0 0.438728729128091 0 0 hPsi_site_4939 iPseU_CNN:0;iRNA_PseU:0 4940 chr7 156746878 156746878 1 + C A STAD 156746878 - 156746858 156746898 41 ATGAGAGCGGAGGTCAGGGTGTCATTCATGTCCTTTCTGCT ATGAGAGCGGAGGTCAGGGTTTCATTCATGTCCTTTCTGCT Direct Gain 0 0.951509958811359 0 0.999984741210938 prediction 0.903019917622717 Functional Gain - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746878 chr7:156746878 nonsynonymous SNV 0.784 1 21 hPsi_associated_SNPs_105980 0 0 0 0 0 Nucleus 0 0.438743607975179 0.999969482421876 0 hPsi_site_4940 iPseU_CNN:0.999969482421876;iRNA_PseU:0 4941 chr4 152204409 152204409 1 + G T BLCA 152204409 + 152204389 152204429 41 AAGACAAGATTTGTGCTGGTGATACTCAAAACATGAAGGAT AAGACAAGATTTGTGCTGGTTATACTCAAAACATGAAGGAT Direct Gain 0 0.951508626770733 0 0.999941825866699 prediction 0.903017253541466 Functional Gain - PRSS48 ENSG00000189099 CDS Human protein_coding chr4:152204409 chr4:152204409 nonsynonymous SNV 0.682 2 21 hPsi_associated_SNPs_105981 0 0 0 0 1 nucleus 0 0.438172603146954 0.999883651733398 0 hPsi_site_4941 iPseU_CNN:0.999883651733398;iRNA_PseU:0 4942 chr4 77700186 77700186 1 + C A UCS 77700186 - 77700166 77700206 41 AGGCTCTCCAGCAGACACTTGACCTGCTCCTGGCCCAGCTT AGGCTCTCCAGCAGACACTTTACCTGCTCCTGGCCCAGCTT Direct Gain 0 0.951499244070514 0 0.999263405799866 prediction 0.902998488141028 Functional Gain - SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77700186 chr4:77700186 synonymous SNV . 0 21 hPsi_associated_SNPs_105982 0 0 0 0 0 Ribosome 0 0.438680736839485 0.998526811599732 0 hPsi_site_4942 iPseU_CNN:0.998526811599732;iRNA_PseU:0 4943 chr12 108010919 108010919 1 + G A SKCM 108010919 - 108010899 108010939 41 AGGGGTGTTTCCGAGTAGTTCTCCTCGCCATGCTCCACTGA AGGGGTGTTTCCGAGTAGTTTTCCTCGCCATGCTCCACTGA Direct Gain 0 0.95149739926577 0 0.906854510307312 prediction 0.902994798531539 Functional Gain - BTBD11 ENSG00000151136 CDS Human protein_coding chr12:108010919 chr12:108010919 synonymous SNV . 0 21 hPsi_associated_SNPs_105983 0 0 0 0 0 cytosol 0 0.4387202568519 0.813709020614624 0 hPsi_site_4943 iPseU_CNN:0.813709020614624;iRNA_PseU:0 4944 chr20 2384444 2384444 1 + C A LUSC 2384444 - 2384424 2384464 41 GGATACTTGTAGAGGTCAGTGATGTCCACGCGGGAGTCACT GGATACTTGTAGAGGTCAGTTATGTCCACGCGGGAGTCACT Direct Gain 0 0.951496874183384 0 0.99639105796814 prediction 0.902993748366768 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2384444 chr20:2384444 synonymous SNV . 0 21 hPsi_associated_SNPs_105984 0 0 0 0 0 exosome 0 0.438720031064517 0.99278211593628 0 hPsi_site_4944 iPseU_CNN:0.99278211593628;iRNA_PseU:0 4945 chr18 29126202 29126202 1 + G T LUAD 29126202 + 29126182 29126222 41 ACTATGCCACCAACCACTGTGATCCTGGGTCCTAGCCAGCC ACTATGCCACCAACCACTGTTATCCTGGGTCCTAGCCAGCC Direct Gain 0 0.951496190116215 0 0.686205089092255 prediction 0.90299238023243 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29126202 chr18:29126202 synonymous SNV . 0 21 hPsi_associated_SNPs_105985 0 0 1 0 0 Endoplasmic reticulum 0 0.438718605016539 0.37241017818451 0 hPsi_site_4945 iPseU_CNN:0.37241017818451;iRNA_PseU:0 4946 chr2 198948716 198948716 1 + G T LUSC 198948716 + 198948696 198948736 41 ACCTCGAGAAAGCCAAGCTTGATATTTCTGCCATAAAAGAG ACCTCGAGAAAGCCAAGCTTTATATTTCTGCCATAAAAGAG Direct Gain 0 0.951494740299637 0 0.335944473743439 prediction 0.902989480599274 Functional Gain - PLCL1 ENSG00000115896 CDS Human protein_coding chr2:198948716 chr2:198948716 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_105986 0 0 0 0 0 Cytosol 0 0.438748182809095 0 0 hPsi_site_4946 iPseU_CNN:0;iRNA_PseU:0 4947 chr22 39078403 39078403 1 + G A COAD 39078403 - 39078383 39078423 41 GAGGGAAAGATCAAAAGTGGCTCCGGCCGCGGACCGGACCC GAGGGAAAGATCAAAAGTGGTTCCGGCCGCGGACCGGACCC Direct Gain 0 0.951492899615166 0 0.999245166778564 prediction 0.902985799230333 Functional Gain - TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078403 chr22:39078403 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_105987 0 0 0 0 0 Ribosome 0 0.438520237842566 0.998490333557128 0 hPsi_site_4947 iPseU_CNN:0.998490333557128;iRNA_PseU:0 4948 chr11 55339905 55339905 1 + C T SKCM 55339905 + 55339885 55339925 41 GTGCATGATCCAAGTCTTTTCATCCCATGTCTTTGGCTGCC GTGCATGATCCAAGTCTTTTTATCCCATGTCTTTGGCTGCC Direct Gain 0 0.951492538150894 0 0.886939883232117 prediction 0.902985076301787 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55339905 chr11:55339905 nonsynonymous SNV 0.038 0 21 hPsi_associated_SNPs_105988 0 0 0 0 0 unknown 0 0.438713531217689 0.773879766464234 0 hPsi_site_4948 iPseU_CNN:0.773879766464234;iRNA_PseU:0 4949 chr22 22673537 22673537 1 + G A LAML 22673537 - 22673517 22673557 41 GTACCACAGTAATAGTCAGCCTCATCCTCAGGCTGGAGCCC GTACCACAGTAATAGTCAGCTTCATCCTCAGGCTGGAGCCC Direct Gain 0 0.95149108542138 0 0.98114812374115 prediction 0.902982170842759 Functional Gain - BMS1P20 ENSG00000211643 CDS Human IG_V_gene chr22:22673537 chr22:22673537 synonymous SNV . 0 21 hPsi_associated_SNPs_105989 0 0 0 0 0 unknown 0 0.438695692053179 0.9622962474823 0 hPsi_site_4949 iPseU_CNN:0.9622962474823;iRNA_PseU:0 4950 chr1 35259856 35259856 1 + C A LIHC 35259856 - 35259836 35259876 41 ACCACGGTCGAGTGCTCCTGGACCTGGTCCAGCAACTTCTC ACCACGGTCGAGTGCTCCTGTACCTGGTCCAGCAACTTCTC Direct Gain 0 0.951486478544467 0 0.999626159667969 prediction 0.902972957088934 Functional Gain - GJA4 ENSG00000187513 CDS Human protein_coding chr1:35259856 chr1:35259856 synonymous SNV . 0 21 hPsi_associated_SNPs_105990 0 0 0 0 0 cytosol 0 0.438714464977323 0.999252319335938 0 hPsi_site_4950 iPseU_CNN:0.999252319335938;iRNA_PseU:0 4951 chr4 74285242 74285242 1 + G A SARC 74285242 - 74285222 74285262 41 GTTGCCTTGGGCTTGTGTTTCACGAGCTCAACAAGTGCACT GTTGCCTTGGGCTTGTGTTTTACGAGCTCAACAAGTGCACT Direct Gain 0 0.951484587877369 0 0.999203383922577 prediction 0.902969175754738 Functional Gain - ALB ENSG00000163631 CDS Human protein_coding chr4:74285242 chr4:74285242 synonymous SNV . 0 21 hPsi_associated_SNPs_105991 0 0 0 0 0 Endoplasmic reticulum 0 0.438511422491303 0.998406767845154 0 hPsi_site_4951 iPseU_CNN:0.998406767845154;iRNA_PseU:0 4952 chr19 56552345 56552345 1 + C A LUAD 56552345 - 56552325 56552365 41 TGTGTCAAGCTCCGGTTGCTGACGAGGGCTGAGGCCAGACT TGTGTCAAGCTCCGGTTGCTTACGAGGGCTGAGGCCAGACT Direct Gain 0 0.95148313795978 0 0.983584403991699 prediction 0.902966275919561 Functional Gain - NLRP5 ENSG00000171487 CDS Human protein_coding chr19:56552345 chr19:56552345 synonymous SNV . 0 21 hPsi_associated_SNPs_105992 0 0 0 0 0 unknown 0 0.438819987951001 0.967168807983398 0 hPsi_site_4952 iPseU_CNN:0.967168807983398;iRNA_PseU:0 4953 chr15 41195587 41195587 1 + G A rs530636584 41195587 - 41195567 41195607 41 GCAGCCTTCTCAAGTGGGTTCAAGCCACTGCTCCCCATTGC GCAGCCTTCTCAAGTGGGTTTAAGCCACTGCTCCCCATTGC Direct Gain 0 0.951482617727702 0 0.919245421886444 prediction 0.902965235455404 Functional Gain - VPS18 ENSG00000104142 UTR3 Human protein_coding chr15:41195587 chr15:41195587 . . 0 21 hPsi_associated_SNPs_105993 0 0 0 0 0 chromatin 0 0.438718444403261 0.838490843772888 0 hPsi_site_4953 iPseU_CNN:0.838490843772888;iRNA_PseU:0 4954 chr9 132637882 132637882 1 + C T HNSC 132637882 + 132637862 132637902 41 TACATCGACGACCTGGTGGTCATCCTGCCCCAGAACGTCTG TACATCGACGACCTGGTGGTTATCCTGCCCCAGAACGTCTG Direct Gain 0 0.951481665644251 0 0.991978168487549 prediction 0.902963331288502 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132637882 chr9:132637882 synonymous SNV . 0 21 hPsi_associated_SNPs_105994 0 0 1 0 2 chromatin 0 0.438797936102239 0.983956336975098 0 hPsi_site_4954 iPseU_CNN:0.983956336975098;iRNA_PseU:0 4955 chr22 50279812 50279812 1 + G A rs116332282 50279812 - 50279792 50279832 41 TTAATGGCCTCGCTGACGATCAGGTTCACCGTATGGCTGAA TTAATGGCCTCGCTGACGATTAGGTTCACCGTATGGCTGAA Direct Gain 0 0.951473995685179 0 0.999997973442078 prediction 0.902947991370359 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279812 chr22:50279812 synonymous SNV . 0 21 hPsi_associated_SNPs_105995 0 0 0 0 0 chromatin 0 0.438707232161152 0.999995946884156 0 hPsi_site_4955 iPseU_CNN:0.999995946884156;iRNA_PseU:0 4956 chr6 157528353 157528353 1 + C T COAD 157528353 + 157528333 157528373 41 TTGAGGGATAACACGTTGGTCACGTTGGCCAACATTTCCGG TTGAGGGATAACACGTTGGTTACGTTGGCCAACATTTCCGG Direct Gain 0 0.951465942832582 0 0.999997794628143 prediction 0.902931885665164 Functional Gain - ARID1B ENSG00000049618 CDS Human protein_coding chr6:157528353 chr6:157528353 synonymous SNV . 0 21 hPsi_associated_SNPs_105996 0 0 1 0 0 Ribosome 0 0.438939737633825 0.999995589256286 0 hPsi_site_4956 iPseU_CNN:0.999995589256286;iRNA_PseU:0 4957 chr12 53666555 53666555 1 + G A COAD 53666555 - 53666535 53666575 41 AGAGATGGCACAGGCCTCGGCATAGAGCTTGTGACTATAGA AGAGATGGCACAGGCCTCGGTATAGAGCTTGTGACTATAGA Direct Gain 0 0.951453797160438 0 0.999503493309021 prediction 0.902907594320876 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53666555 chr12:53666555 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_105997 0 0 0 0 0 Nucleus 0 0.438718679589406 0.999006986618042 0 hPsi_site_4957 iPseU_CNN:0.999006986618042;iRNA_PseU:0 4958 chr16 31235914 31235914 1 + C T LUSC 31235914 + 31235894 31235934 41 AGCTTCGGCGACGGCGTCCTCTCCTTCTACGATGCCAGCGA AGCTTCGGCGACGGCGTCCTTTCCTTCTACGATGCCAGCGA Direct Gain 0 0.951445182978129 0 0.999481916427612 prediction 0.902890365956258 Functional Gain - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31235914 chr16:31235914 synonymous SNV . 0 21 hPsi_associated_SNPs_105998 0 0 0 0 0 exosome 0 0.438714239758531 0.998963832855224 0 hPsi_site_4958 iPseU_CNN:0.998963832855224;iRNA_PseU:0 4959 chr17 3213742 3213742 1 + C T LUSC 3213742 + 3213722 3213762 41 ACTACCATTGGAGGCACCCTCAGCATCCTGGCGGCCATCCT ACTACCATTGGAGGCACCCTTAGCATCCTGGCGGCCATCCT Direct Gain 0 0.951422245042452 0 0.429944097995758 prediction 0.902844490084904 Functional Gain - OR3A4P ENSG00000180068 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:3213742 chr17:3213742 . . 0 21 hPsi_associated_SNPs_105999 0 0 0 0 0 unknown 0 0.438718529171443 0 0 hPsi_site_4959 iPseU_CNN:0;iRNA_PseU:0 4960 chr12 45833493 45833493 1 + C T LIHC 45833493 + 45833473 45833513 41 CCCAGGCTGGGACACAGTGGCATGATCTTGGCTCACTGCAA CCCAGGCTGGGACACAGTGGTATGATCTTGGCTCACTGCAA Direct Gain 0 0.951414215008524 0 0.999215722084045 prediction 0.902828430017049 Functional Gain - ANO6 ENSG00000177119 CDS Human protein_coding chr12:45833493 chr12:45833493 synonymous SNV . 0 21 hPsi_associated_SNPs_106000 0 0 0 0 1 Ribosome 0 0.438718592871047 0.99843144416809 0 hPsi_site_4960 iPseU_CNN:0.99843144416809;iRNA_PseU:0 4961 chr22 37421541 37421541 1 + G A rs140282548 37421541 - 37421521 37421561 41 GAGGAAATCCAGCCCACAGGCAGAAGGCTCTGCCCTACCCA GAGGAAATCCAGCCCACAGGTAGAAGGCTCTGCCCTACCCA Direct Gain 0 0.951413799682258 0 0.991394996643066 prediction 0.902827599364517 Functional Gain - MPST ENSG00000128309 intronic Human protein_coding chr22:37421541 chr22:37421541 . . 0 21 hPsi_associated_SNPs_106001 0 0 0 0 0 chromatin 0 0.438718592995102 0.982789993286132 0 hPsi_site_4961 iPseU_CNN:0.982789993286132;iRNA_PseU:0 4962 chr10 7759652 7759652 1 + G A rs140264160 7759652 - 7759632 7759672 41 TGGTAGTGAAGTTCGAACTGCACCTTTGCTCCTGGGAGGAC TGGTAGTGAAGTTCGAACTGTACCTTTGCTCCTGGGAGGAC Direct Gain 0 0.951412656687795 0 0.201596826314926 prediction 0.902825313375589 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7759652 chr10:7759652 synonymous SNV . 0 21 hPsi_associated_SNPs_106002 0 0 0 0 0 cytosol 0 0.438849275373662 0 0 hPsi_site_4962 iPseU_CNN:0;iRNA_PseU:0 4963 chr13 61109283 61109283 1 + G A COAD 61109283 - 61109263 61109303 41 ATGAATTTAACAACTGCTGTCATACCCGAAGAATGGAGGGC ATGAATTTAACAACTGCTGTTATACCCGAAGAATGGAGGGC Direct Gain 0 0.951412648174716 0 0.993955016136169 prediction 0.902825296349432 Functional Gain - TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61109283 chr13:61109283 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106003 0 0 0 0 0 Cytosol 0 0.438835273152627 0.987910032272338 0 hPsi_site_4963 iPseU_CNN:0.987910032272338;iRNA_PseU:0 4964 chr16 30666245 30666245 1 + T A STAD 30666245 - 30666225 30666265 41 TTAGGGAGAAGTGCTGGGGTATTGTGGTCCTGAGTTCGCCA TTAGGGAGAAGTGCTGGGGTTTTGTGGTCCTGAGTTCGCCA Direct Gain 0 0.951411260152679 0 0.031781017780304 prediction 0.902822520305357 Functional Gain - PRR14 ENSG00000156858 CDS Human protein_coding chr16:30666245 chr16:30666245 nonsynonymous SNV 0.966 1 21 hPsi_associated_SNPs_106004 0 0 0 0 0 Cytosol 0 0.43871859849286 0 0 hPsi_site_4964 iPseU_CNN:0;iRNA_PseU:0 4965 chr9 139739233 139739233 1 + G A rs543626205 139739233 - 139739213 139739253 41 CGATGCCTCGGCCCGCGCCGCACGCTGGGCCTCCCGCCCTC CGATGCCTCGGCCCGCGCCGTACGCTGGGCCTCCCGCCCTC Direct Gain 0 0.951408246506726 0 0.999999940395355 prediction 0.902816493013452 Functional Gain - C9orf172 ENSG00000232434 CDS Human protein_coding chr9:139739233 chr9:139739233 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106005 0 0 0 0 0 chromatin 0 0.438071232391859 0.99999988079071 0 hPsi_site_4965 iPseU_CNN:0.99999988079071;iRNA_PseU:0 4966 chr9 112642897 112642897 1 + G A LAML 112642897 - 112642877 112642917 41 TTCAGACTGCCGCCTCCTGGCTTCCTCCTCTTCGGCAGTTC TTCAGACTGCCGCCTCCTGGTTTCCTCCTCTTCGGCAGTTC Direct Gain 0 0.951403811694213 0 0.983214855194092 prediction 0.902807623388426 Functional Gain - PALM2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978;ENSG00000243444 CDS Human other chr9:112642897 chr9:112642897 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106006 0 0 0 0 0 unknown 0 0.438718593102325 0.966429710388184 0 hPsi_site_4966 iPseU_CNN:0.966429710388184;iRNA_PseU:0 4967 chr12 49690770 49690770 1 + C T LUAD 49690770 + 49690750 49690790 41 CTGACGGCAGCGCTGAGGGACATCCGCGCGCAGTACGAGAG CTGACGGCAGCGCTGAGGGATATCCGCGCGCAGTACGAGAG Direct Gain 0 0.951400080074749 0 0.986536264419556 prediction 0.902800160149497 Functional Gain - PRPH ENSG00000135406 CDS Human protein_coding chr12:49690770 chr12:49690770 synonymous SNV . 0 21 hPsi_associated_SNPs_106007 0 0 0 0 2 exosome 0 0.438718592996256 0.973072528839112 0 hPsi_site_4967 iPseU_CNN:0.973072528839112;iRNA_PseU:0 4968 chr20 43851270 43851270 1 + C T SKCM 43851270 + 43851250 43851290 41 CTCAAAACCAGGTAACAATTCATAGTCAAGATCAAGAGCAT CTCAAAACCAGGTAACAATTTATAGTCAAGATCAAGAGCAT Direct Gain 0 0.951400032637165 0 0.999934077262878 prediction 0.90280006527433 Functional Gain - SEMG2 ENSG00000124157 CDS Human protein_coding chr20:43851270 chr20:43851270 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106008 0 0 0 0 0 Cytosol 0 0.438721022486807 0.999868154525756 0 hPsi_site_4968 iPseU_CNN:0.999868154525756;iRNA_PseU:0 4969 chr20 62688695 62688695 1 + G T rs566682464 62688695 + 62688675 62688715 41 TAGCCCTAACGCGGCTGAGGGATCCAGGCCTTGCCTCTGGG TAGCCCTAACGCGGCTGAGGTATCCAGGCCTTGCCTCTGGG Direct Gain 0 0.951395998244863 0 0.832392573356628 prediction 0.902791996489726 Functional Gain - TCEA2 ENSG00000171703 UTR5 Human protein_coding chr20:62688695 chr20:62688695 . . 0 21 hPsi_associated_SNPs_106009 0 0 0 0 0 Cytosol 0 0.438697968399252 0.664785146713256 0 hPsi_site_4969 iPseU_CNN:0.664785146713256;iRNA_PseU:0 4970 chr19 45807945 45807945 1 + G A rs12971645 45807945 - 45807925 45807965 41 CCAGTCGCTGCCTGAGGACACATCTGCCTCCTCCATTGGAC CCAGTCGCTGCCTGAGGACATATCTGCCTCCTCCATTGGAC Direct Gain 0 0.951392847585724 0 0.29866161942482 prediction 0.902785695171447 Functional Gain - MARK4 ENSG00000007047 UTR3 Human protein_coding chr19:45807945 chr19:45807945 . . 0 21 hPsi_associated_SNPs_106010 0 1 0 0 0 Nucleus 0 0.438718482862858 0 0 hPsi_site_4970 iPseU_CNN:0;iRNA_PseU:0 4971 chr4 123227177 123227177 1 + C T STAD 123227177 + 123227157 123227197 41 GAATAGACCAATTGTTTATGCACAGCCTGTGGCCTTTGATA GAATAGACCAATTGTTTATGTACAGCCTGTGGCCTTTGATA Direct Gain 0 0.951392618318804 0 0.0623690485954285 prediction 0.902785236637607 Functional Gain - KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123227177 chr4:123227177 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106011 0 0 1 0 1 Nucleus 0 0.438999312682649 0 0 hPsi_site_4971 iPseU_CNN:0;iRNA_PseU:0 4972 chr12 7064853 7064853 1 + C T UCEC 7064853 + 7064833 7064873 41 AGCAGGAGGTGAAGAACTTGCACCAGCGTCTGGAAGGGCAG AGCAGGAGGTGAAGAACTTGTACCAGCGTCTGGAAGGGCAG Direct Gain 0 0.951389264848494 0 0.345818698406219 prediction 0.902778529696988 Functional Gain - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7064853 chr12:7064853 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_106012 0 0 1 0 1 chromatin 0 0.434204956348715 0 0 hPsi_site_4972 iPseU_CNN:0;iRNA_PseU:0 4973 chr11 122830264 122830264 1 + C A rs76252188 122830264 - 122830244 122830284 41 GAAAGCAAACATGGACGGCAGATAGATGATAATAATAGGCC GAAAGCAAACATGGACGGCATATAGATGATAATAATAGGCC Direct Gain 0 0.951386508977622 0 0.00441825389862061 prediction 0.902773017955244 Functional Gain - C11orf63 ENSG00000109944 UTR3 Human protein_coding chr11:122830264 chr11:122830264 . . 0 21 hPsi_associated_SNPs_106013 0 0 0 0 0 exosome 0 0.438718455910464 0 0 hPsi_site_4973 iPseU_CNN:0;iRNA_PseU:0 4974 chr1 248128636 248128636 1 + G T BLCA 248128636 + 248128616 248128656 41 GGAAGTCAACATTATTACATGAACATTTCAGATGTCATCTC GGAAGTCAACATTATTACATTAACATTTCAGATGTCATCTC Direct Gain 0 0.951385242535008 0 0.27472248673439 prediction 0.902770485070016 Functional Gain - OR2AK2 ENSG00000187080 CDS Human protein_coding chr1:248128636 chr1:248128636 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_106014 0 0 0 0 0 exosome 0 0.438870960803983 0 0 hPsi_site_4974 iPseU_CNN:0;iRNA_PseU:0 4975 chr6 144780066 144780066 1 + G A PAAD 144780066 - 144780046 144780086 41 TTTACCCACTCCTCCTTTGTCTTGATGACCTTTTCAAGCTC TTTACCCACTCCTCCTTTGTTTTGATGACCTTTTCAAGCTC Direct Gain 0 0.951385084114775 0 0.983875036239624 prediction 0.90277016822955 Functional Gain - UTRN ENSG00000152818 CDS Human protein_coding chr6:144780066 chr6:144780066 synonymous SNV . 0 21 hPsi_associated_SNPs_106015 0 0 0 0 0 Nucleus 0 0.4387182824739 0.967750072479248 0 hPsi_site_4975 iPseU_CNN:0.967750072479248;iRNA_PseU:0 4976 chr22 38119979 38119979 1 + C T rs534931785 38119979 + 38119959 38119999 41 ACCTCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAAC ACCTCCTCTCCCAATAGAGCTACACGAGACAACCCCAGAAC Direct Gain 0 0.951383181739883 0 0.999373197555542 prediction 0.902766363479766 Functional Gain - TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38119979 chr22:38119979 synonymous SNV . 0 21 hPsi_associated_SNPs_106016 0 0 0 0 0 Ribosome 0 0.438220721875244 0.998746395111084 0 hPsi_site_4976 iPseU_CNN:0.998746395111084;iRNA_PseU:0 4977 chr7 94540239 94540239 1 + C T LUAD 94540239 + 94540219 94540259 41 GTGTTGATACAGAGGATGCTCACAAGAGTAATGCAACTCCA GTGTTGATACAGAGGATGCTTACAAGAGTAATGCAACTCCA Direct Gain 0 0.951376599927184 0 0.917296767234802 prediction 0.902753199854369 Functional Gain - PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94540239 chr7:94540239 nonsynonymous SNV 0.211 2 21 hPsi_associated_SNPs_106017 0 0 1 0 0 Nucleus 0 0.437830676261069 0.834593534469604 0 hPsi_site_4977 iPseU_CNN:0.834593534469604;iRNA_PseU:0 4978 chr1 248224871 248224871 1 + G T STAD 248224871 + 248224851 248224891 41 AGCCTGAGGAACAAGGAGGTGATGGGGGCCCTGACACGAGT AGCCTGAGGAACAAGGAGGTTATGGGGGCCCTGACACGAGT Direct Gain 0 0.951374936761945 0 0.703839719295502 prediction 0.902749873523889 Functional Gain - OR2L3 ENSG00000198128 CDS Human protein_coding chr1:248224871 chr1:248224871 synonymous SNV . 0 21 hPsi_associated_SNPs_106018 0 0 0 0 0 unknown 0 0.438731305687663 0.407679438591004 0 hPsi_site_4978 iPseU_CNN:0.407679438591004;iRNA_PseU:0 4979 chr20 21195243 21195243 1 + C T BLCA 21195243 + 21195223 21195263 41 AGCTATTCACAGTAGTGAATCATCTTGCAGCTTGCCATCTA AGCTATTCACAGTAGTGAATTATCTTGCAGCTTGCCATCTA Direct Gain 0 0.951371289330801 0 0.989763379096985 prediction 0.902742578661602 Functional Gain - KIZ ENSG00000088970 ncRNA_exonic Human protein_coding chr20:21195243 chr20:21195243 . 0.836 2 21 hPsi_associated_SNPs_106019 0 0 1 1 2 Cytosol 0 0.441511514664428 0.97952675819397 0 hPsi_site_4979 iPseU_CNN:0.97952675819397;iRNA_PseU:0 4980 chr12 2162548 2162548 1 + G A rs112412740 2162548 - 2162528 2162568 41 TTACCTGATTCCCATTATGGCATCAAACCCCAAAAACTGCT TTACCTGATTCCCATTATGGTATCAAACCCCAAAAACTGCT Direct Gain 0 0.951369434869067 0 0.119460731744766 prediction 0.902738869738133 Functional Gain - CACNA1C ENSG00000151067 UTR5 Human protein_coding chr12:2162548 chr12:2162548 . . 0 21 hPsi_associated_SNPs_106020 2 0 0 0 0 Cytosol 0 0.438718582542371 0 0 hPsi_site_4980 iPseU_CNN:0;iRNA_PseU:0 4981 chr12 862641 862641 1 + T A rs3088353 862641 - 862621 862661 41 CCGCGCAGAGGTCTGCAGGGAACCGCGGCCGGGCGGGTTCG CCGCGCAGAGGTCTGCAGGGTACCGCGGCCGGGCGGGTTCG Direct Gain 0 0.951355994607272 0 0.95866334438324 prediction 0.902711989214545 Functional Gain - WNK1 ENSG00000060237 UTR5 Human protein_coding chr12:862641 chr12:862641 . . 0 21 hPsi_associated_SNPs_106021 0 0 0 0 0 Ribosome 0 0.438631843812195 0.91732668876648 0 hPsi_site_4981 iPseU_CNN:0.91732668876648;iRNA_PseU:0 4982 chr16 68961747 68961747 1 + G A BLCA 68961747 - 68961727 68961767 41 GCCTGTCTGGGGGGCTGTCTCATGGCTCTGCTGTTGTTCAA GCCTGTCTGGGGGGCTGTCTTATGGCTCTGCTGTTGTTCAA Direct Gain 0 0.95133937148842 0 0.999765634536743 prediction 0.90267874297684 Functional Gain - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68961747 chr16:68961747 nonsynonymous SNV 0.468 0 21 hPsi_associated_SNPs_106022 0 0 0 0 0 Nucleus 0 0.438719541911616 0.999531269073486 0 hPsi_site_4982 iPseU_CNN:0.999531269073486;iRNA_PseU:0 4983 chr2 242396218 242396218 1 + C T UCEC 242396218 + 242396198 242396238 41 GCCGGAAGAGCCCCCTGAGTCTGAGCCCTGCATTTCAGGTG GCCGGAAGAGCCCCCTGAGTTTGAGCCCTGCATTTCAGGTG Direct Gain 0 0.951333636391091 0 0.129858404397964 prediction 0.902667272782182 Functional Gain - FARP2 ENSG00000006607 CDS Human protein_coding chr2:242396218 chr2:242396218 synonymous SNV . 0 21 hPsi_associated_SNPs_106023 0 0 0 0 1 Nucleus 0 0.438735969808702 0 0 hPsi_site_4983 iPseU_CNN:0;iRNA_PseU:0 4984 chr9 127962972 127962972 1 + G A rs10986636 127962972 - 127962952 127962992 41 AGGGAAGGCCCTTCCCCGTTCTTTGCACCCGGCTTGGGCCC AGGGAAGGCCCTTCCCCGTTTTTTGCACCCGGCTTGGGCCC Direct Gain 0 0.951325561162303 0 0.926680684089661 prediction 0.902651122324606 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127962972 chr9:127962972 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106024 0 0 0 0 0 Cytosol 0 0.438717657952336 0.853361368179322 0 hPsi_site_4984 iPseU_CNN:0.853361368179322;iRNA_PseU:0 4985 chr12 9001417 9001417 1 + C T BLCA 9001417 + 9001397 9001437 41 TGGGACTTTCCTCAGCCCCTCATTGACCCAATGCCCCAAGG TGGGACTTTCCTCAGCCCCTTATTGACCCAATGCCCCAAGG Direct Gain 0 0.951325373361738 0 0.993374705314636 prediction 0.902650746723476 Functional Gain - A2ML1 ENSG00000166535 CDS Human protein_coding chr12:9001417 chr12:9001417 synonymous SNV . 0 21 hPsi_associated_SNPs_106025 0 0 0 0 1 exosome 0 0.438718592995102 0.986749410629272 0 hPsi_site_4985 iPseU_CNN:0.986749410629272;iRNA_PseU:0 4986 chr9 131477135 131477135 1 + C A LUSC 131477135 - 131477115 131477155 41 GGATGGGGTACCTGGTGGGGGAGGCTGGTGGAGATGGCCCA GGATGGGGTACCTGGTGGGGTAGGCTGGTGGAGATGGCCCA Direct Gain 0 0.951321501148942 0 0.892035126686096 prediction 0.902643002297883 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131477135 chr9:131477135 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106026 0 0 0 0 0 chromatin 0 0.43871859299487 0.784070253372192 0 hPsi_site_4986 iPseU_CNN:0.784070253372192;iRNA_PseU:0 4987 chr3 196730797 196730797 1 + C T COAD 196730797 + 196730777 196730817 41 CCCGAGCACTGCTGAGACGACATCCCTTCCAGCGCCGCCAC CCCGAGCACTGCTGAGACGATATCCCTTCCAGCGCCGCCAC Direct Gain 0 0.951314418707159 0 0.997407972812653 prediction 0.902628837414319 Functional Gain - MELTF ENSG00000163975 CDS Human protein_coding chr3:196730797 chr3:196730797 nonsynonymous SNV 0.991 1 21 hPsi_associated_SNPs_106027 0 0 1 0 1 chromatin 0 0.438735858811625 0.994815945625306 0 hPsi_site_4987 iPseU_CNN:0.994815945625306;iRNA_PseU:0 4988 chr2 131520903 131520903 1 + G T LUAD 131520903 + 131520883 131520923 41 CACGGGACAGCTACAGTGGGGACGCCCTCTACGAGCTCTTC CACGGGACAGCTACAGTGGGTACGCCCTCTACGAGCTCTTC Direct Gain 0 0.951311673515787 0 0.999790668487549 prediction 0.902623347031573 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131520903 chr2:131520903 nonsynonymous SNV 0.810 4 21 hPsi_associated_SNPs_106028 0 0 0 0 0 Nucleus 0 0.438705179083199 0.999581336975098 0 hPsi_site_4988 iPseU_CNN:0.999581336975098;iRNA_PseU:0 4989 chr2 74441578 74441578 1 + G A rs149200674 74441578 - 74441558 74441598 41 ATGGCTGCTCCTGGCTAGATCACAGGACCCTGCATGATACT ATGGCTGCTCCTGGCTAGATTACAGGACCCTGCATGATACT Direct Gain 0 0.951310756831281 0 0.403498232364655 prediction 0.902621513662562 Functional Gain - MTHFD2 ENSG00000065911;ENSG00000264324 UTR3 Human other chr2:74441578 chr2:74441578 . . 0 21 hPsi_associated_SNPs_106029 0 0 0 0 2 Ribosome 0 0.438718802515984 0 0 hPsi_site_4989 iPseU_CNN:0;iRNA_PseU:0 4990 chr10 26849092 26849092 1 + G A SKCM 26849092 - 26849072 26849112 41 TGACCCACTGGTTAAGGGTTCTTGTGTCATCACAGCAGAGA TGACCCACTGGTTAAGGGTTTTTGTGTCATCACAGCAGAGA Direct Gain 0 0.951309542208861 0 0.647014141082764 prediction 0.902619084417722 Functional Gain - APBB1IP ENSG00000077420 CDS Human protein_coding chr10:26849092 chr10:26849092 nonsynonymous SNV 0.977 0 21 hPsi_associated_SNPs_106030 0 0 0 0 0 nucleus 0 0.438718722552439 0.294028282165528 0 hPsi_site_4990 iPseU_CNN:0.294028282165528;iRNA_PseU:0 4991 chr17 76495050 76495050 1 + C T rs691291 76495050 + 76495030 76495070 41 AGGAAAGCTGACGAGCCAGTCACCCGACGTGACCCCGAGGC AGGAAAGCTGACGAGCCAGTTACCCGACGTGACCCCGAGGC Direct Gain 0 0.951309126169156 0 0.999997913837433 prediction 0.902618252338313 Functional Gain - DNAH17-AS1 ENSG00000267432 ncRNA_exonic Human processed_transcript chr17:76495050 chr17:76495050 . . 0 21 hPsi_associated_SNPs_106031 0 0 0 0 0 unknown 0 0.438026324955185 0.999995827674866 0 hPsi_site_4991 iPseU_CNN:0.999995827674866;iRNA_PseU:0 4992 chr2 85663680 85663680 1 + G A rs76432883 85663680 - 85663660 85663700 41 GCTTGGTGGGGAAGAGCAGGCAGGTGAGTTCCCGGCTGCCG GCTTGGTGGGGAAGAGCAGGTAGGTGAGTTCCCGGCTGCCG Direct Gain 0 0.951305006304003 0 0.999591708183289 prediction 0.902610012608007 Functional Gain - SH2D6 ENSG00000152292 CDS Human protein_coding chr2:85663680 chr2:85663680 nonsynonymous SNV 0.973 0 21 hPsi_associated_SNPs_106032 0 0 0 0 0 exosome 0 0.438718593007223 0.999183416366578 0 hPsi_site_4992 iPseU_CNN:0.999183416366578;iRNA_PseU:0 4993 chr17 3324337 3324337 1 + C T UCEC 3324337 + 3324317 3324357 41 GTTGGTGGCTGCGTCCTGGGCTTGTGCCTTCACCAACGCAC GTTGGTGGCTGCGTCCTGGGTTTGTGCCTTCACCAACGCAC Direct Gain 0 0.95130231121133 0 0.995303153991699 prediction 0.90260462242266 Functional Gain - OR3A3 ENSG00000159961 CDS Human protein_coding chr17:3324337 chr17:3324337 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106033 0 0 0 0 0 exosome 0 0.438673612587257 0.990606307983398 0 hPsi_site_4993 iPseU_CNN:0.990606307983398;iRNA_PseU:0 4994 chr4 57180246 57180246 1 + G A LUAD 57180246 - 57180226 57180266 41 GGTGTCCGTTCTGGTCCAGGCAGGGCCGACTCTCAAGGCCG GGTGTCCGTTCTGGTCCAGGTAGGGCCGACTCTCAAGGCCG Direct Gain 0 0.951301357291283 0 0.998361706733704 prediction 0.902602714582565 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57180246 chr4:57180246 nonsynonymous SNV 0.104 0 21 hPsi_associated_SNPs_106034 0 0 0 0 0 cytosol 0 0.438718678873062 0.996723413467408 0 hPsi_site_4994 iPseU_CNN:0.996723413467408;iRNA_PseU:0 4995 chrX 89177677 89177677 1 + C T UCEC 89177677 + 89177657 89177697 41 AAAGGTCAAGGTTTCTGTCACATCCCCGTCTTCTCCAGAAC AAAGGTCAAGGTTTCTGTCATATCCCCGTCTTCTCCAGAAC Direct Gain 0 0.951300534918178 0 0.988943576812744 prediction 0.902601069836355 Functional Gain - TGIF2LX ENSG00000153779 CDS Human protein_coding chrX:89177677 chrX:89177677 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106035 0 0 0 0 0 exosome 0 0.439397535298076 0.977887153625488 0 hPsi_site_4995 iPseU_CNN:0.977887153625488;iRNA_PseU:0 4996 chr19 58291636 58291636 1 + C A rs574881843 58291636 - 58291616 58291656 41 TCATGATGAGTTAGGCGAATGATGTACTGTGGGCACCTGCC TCATGATGAGTTAGGCGAATTATGTACTGTGGGCACCTGCC Direct Gain 0 0.951295729206828 0 0.270994812250137 prediction 0.902591458413656 Functional Gain - ZNF586 ENSG00000083828 UTR3 Human protein_coding chr19:58291636 chr19:58291636 . . 0 21 hPsi_associated_SNPs_106036 0 0 0 0 0 chromatin 0 0.438721230254224 0 0 hPsi_site_4996 iPseU_CNN:0;iRNA_PseU:0 4997 chr16 67682003 67682003 1 + C T UCEC 67682003 + 67681983 67682023 41 ACGTACTGTCGTTCCTGAATCTCGCAGGCACCGACACTGCC ACGTACTGTCGTTCCTGAATTTCGCAGGCACCGACACTGCC Direct Gain 0 0.951295704797762 0 0.986979007720947 prediction 0.902591409595524 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67682003 chr16:67682003 nonsynonymous SNV 0.065 2 21 hPsi_associated_SNPs_106037 0 0 0 0 2 chromatin 0 0.442339534054224 0.973958015441894 0 hPsi_site_4997 iPseU_CNN:0.973958015441894;iRNA_PseU:0 4998 chrX 119744919 119744919 1 + G A KIRC 119744919 - 119744899 119744939 41 ACTTACATGTCTTCTGCAGACATCTTCATGACTCCAACACA ACTTACATGTCTTCTGCAGATATCTTCATGACTCCAACACA Direct Gain 0 0.95129339239185 0 0.319665431976318 prediction 0.902586784783701 Functional Gain - MCTS1 ENSG00000232119 CDS Human protein_coding chrX:119744919 chrX:119744919 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106038 0 0 0 0 0 Cytosol 0 0.438747406950732 0 0 hPsi_site_4998 iPseU_CNN:0;iRNA_PseU:0 4999 chrX 48681938 48681938 1 + G T UCEC 48681938 + 48681918 48681958 41 GTGCAGGGAACTACACCCCAGATATCTCCCAGTACACTGAT GTGCAGGGAACTACACCCCATATATCTCCCAGTACACTGAT Direct Gain 0 0.95128509657803 0 0.444568634033203 prediction 0.902570193156059 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681938 chrX:48681938 nonsynonymous SNV 0.122 0 21 hPsi_associated_SNPs_106039 0 0 1 0 1 Cytosol 0 0.438840669345487 0 0 hPsi_site_4999 iPseU_CNN:0;iRNA_PseU:0 5000 chr19 603592 603592 1 + C T SKCM 603592 + 603572 603612 41 TTCATGGTGGGAAACCTCATCATCATCCCAGTGGGCATCAC TTCATGGTGGGAAACCTCATTATCATCCCAGTGGGCATCAC Direct Gain 0 0.951284270609897 0 0.933309257030487 prediction 0.902568541219794 Functional Gain - HCN2 ENSG00000099822 CDS Human protein_coding chr19:603592 chr19:603592 synonymous SNV . 0 21 hPsi_associated_SNPs_106040 0 0 0 0 1 chromatin 0 0.438718579247809 0.866618514060974 0 hPsi_site_5000 iPseU_CNN:0.866618514060974;iRNA_PseU:0 5001 chr3 10089718 10089718 1 + G T UCEC 10089718 + 10089698 10089738 41 AATATGCATTTAAGTTTTTTGACACGTACTGCCAGCAGGTA AATATGCATTTAAGTTTTTTTACACGTACTGCCAGCAGGTA Direct Gain 0 0.951279643174109 0 0.990838050842285 prediction 0.902559286348219 Functional Gain - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10089718 chr3:10089718 nonsynonymous SNV 0.969 4 21 hPsi_associated_SNPs_106041 0 0 1 0 1 Cytosol 0 0.438734825290351 0.98167610168457 0 hPsi_site_5001 iPseU_CNN:0.98167610168457;iRNA_PseU:0 5002 chr3 186395244 186395244 1 + C T COAD 186395244 + 186395224 186395264 41 ATAGACAGCATCCCCATGGACACCACCCCCATGGACACCAT ATAGACAGCATCCCCATGGATACCACCCCCATGGACACCAT Direct Gain 0 0.951279133417534 0 0.909310817718506 prediction 0.902558266835068 Functional Gain - HRG ENSG00000113905 CDS Human protein_coding chr3:186395244 chr3:186395244 nonsynonymous SNV 0.008 3 21 hPsi_associated_SNPs_106042 0 0 0 0 0 exosome 0 0.44163063388977 0.818621635437012 0 hPsi_site_5002 iPseU_CNN:0.818621635437012;iRNA_PseU:0 5003 chr12 132497648 132497648 1 + G A UCEC 132497648 - 132497628 132497668 41 GCATCTCATCAATGACCAGGCACTTCCAGCGCACTCGTGTG GCATCTCATCAATGACCAGGTACTTCCAGCGCACTCGTGTG Direct Gain 0 0.95127712739559 0 0.99998939037323 prediction 0.90255425479118 Functional Gain - EP400 ENSG00000183495 CDS Human protein_coding chr12:132497648 chr12:132497648 nonsynonymous SNV 0.774 2 21 hPsi_associated_SNPs_106043 0 0 0 0 0 Cytosol 0 0.438718639315009 0.99997878074646 0 hPsi_site_5003 iPseU_CNN:0.99997878074646;iRNA_PseU:0 5004 chr11 126873751 126873751 1 + G A rs11220700 126873751 - 126873731 126873771 41 TCTGGGTCACCCAGCTCCGGCTCGCCCCGCTGGCGGAGGTG TCTGGGTCACCCAGCTCCGGTTCGCCCCGCTGGCGGAGGTG Direct Gain 0 0.951275785809948 0 0.431351542472839 prediction 0.902551571619896 Functional Gain - KIRREL3-AS3 ENSG00000218109;ENSG00000256527 ncRNA_exonic Human other chr11:126873751 chr11:126873751 . . 0 21 hPsi_associated_SNPs_106044 0 0 0 0 0 unknown 0 0.438718691831041 0 0 hPsi_site_5004 iPseU_CNN:0;iRNA_PseU:0 5005 chrX 135292062 135292062 1 + G A CESC 135292062 - 135292042 135292082 41 GTCGTGCCAGGATTGTCCTTCATAGGCCACCACACTGGAGC GTCGTGCCAGGATTGTCCTTTATAGGCCACCACACTGGAGC Direct Gain 0 0.951275042336702 0 0.963175654411316 prediction 0.902550084673404 Functional Gain - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135292062 chrX:135292062 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106045 0 0 0 0 0 chromatin 0 0.438750274503941 0.926351308822632 0 hPsi_site_5005 iPseU_CNN:0.926351308822632;iRNA_PseU:0 5006 chr22 41621027 41621027 1 + C T LUSC 41621027 + 41621007 41621047 41 GAAGGGATGAAGCTGGAGGCCATTGACCCCCTGAATCTGGG GAAGGGATGAAGCTGGAGGCTATTGACCCCCTGAATCTGGG Direct Gain 0 0.951272287550589 0 0.974435567855835 prediction 0.902544575101179 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41621027 chr22:41621027 synonymous SNV . 0 21 hPsi_associated_SNPs_106046 0 0 1 0 2 Ribosome 0 0.4387185932467 0.94887113571167 0 hPsi_site_5006 iPseU_CNN:0.94887113571167;iRNA_PseU:0 5007 chr20 3838459 3838459 1 + G A rs11905555 3838459 - 3838439 3838479 41 GAGGGCAAGGGCAGGACGCTCACGAGGCTGGTAGCTCTGGT GAGGGCAAGGGCAGGACGCTTACGAGGCTGGTAGCTCTGGT Direct Gain 0 0.951258495736866 0 0.999409556388855 prediction 0.902516991473731 Functional Gain - MAVS ENSG00000088888 intronic Human protein_coding chr20:3838459 chr20:3838459 . . 0 21 hPsi_associated_SNPs_106047 0 0 0 0 0 Nucleus 0 0.438718552855577 0.99881911277771 0 hPsi_site_5007 iPseU_CNN:0.99881911277771;iRNA_PseU:0 5008 chr5 147040868 147040868 1 + C T SKCM 147040868 + 147040848 147040888 41 TCGTGCTGCTTGATAAGGTTCTCCCTCACAGCCTGCAGCTC TCGTGCTGCTTGATAAGGTTTTCCCTCACAGCCTGCAGCTC Direct Gain 0 0.951258477842026 0 0.745697200298309 prediction 0.902516955684052 Functional Gain - JAKMIP2 ENSG00000176049 CDS Human protein_coding chr5:147040868 chr5:147040868 synonymous SNV . 0 21 hPsi_associated_SNPs_106048 0 0 0 0 0 Endoplasmic reticulum 0 0.43871717032563 0.491394400596618 0 hPsi_site_5008 iPseU_CNN:0.491394400596618;iRNA_PseU:0 5009 chr16 1826238 1826238 1 + G A BLCA 1826238 - 1826218 1826258 41 CTGGTGGTCCCACGTGTGGTCAGGAGCCCAGGTCCAGCAGG CTGGTGGTCCCACGTGTGGTTAGGAGCCCAGGTCCAGCAGG Direct Gain 0 0.951257347515457 0 0.99460244178772 prediction 0.902514695030913 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1826238 chr16:1826238 synonymous SNV . 0 21 hPsi_associated_SNPs_106049 0 0 0 0 0 chromatin 0 0.438714021089078 0.98920488357544 0 hPsi_site_5009 iPseU_CNN:0.98920488357544;iRNA_PseU:0 5010 chr16 67688702 67688702 1 + G A UCEC 67688702 - 67688682 67688722 41 GGATGGAGCCAGTTCTGTTTCTCCCCGCTCCAGGGGCCGCC GGATGGAGCCAGTTCTGTTTTTCCCCGCTCCAGGGGCCGCC Direct Gain 0 0.951254057836651 0 0.988069474697113 prediction 0.902508115673302 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67688702 chr16:67688702 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_106050 0 0 0 0 0 chromatin 0 0.438716982200006 0.976138949394226 0 hPsi_site_5010 iPseU_CNN:0.976138949394226;iRNA_PseU:0 5011 chr11 60070165 60070165 1 + G T LUAD 60070165 + 60070145 60070185 41 CTATGGCAACTCAAATAATTGTCATGGGACTATGTCCATCT CTATGGCAACTCAAATAATTTTCATGGGACTATGTCCATCT Direct Gain 0 0.951253094030268 0 0.81625908613205 prediction 0.902506188060536 Functional Gain - MS4A4A ENSG00000110079 CDS Human protein_coding chr11:60070165 chr11:60070165 nonsynonymous SNV 0.003 2 21 hPsi_associated_SNPs_106051 0 0 0 0 1 Endoplasmic reticulum 0 0.438718731021464 0.6325181722641 0 hPsi_site_5011 iPseU_CNN:0.6325181722641;iRNA_PseU:0 5012 chr20 56140113 56140113 1 + G A GBM 56140113 - 56140093 56140133 41 ATGTTGCCAGCTGAGAGCTTCATAGACTAGAGGGACACCTT ATGTTGCCAGCTGAGAGCTTTATAGACTAGAGGGACACCTT Direct Gain 0 0.951251175590217 0 0.998579263687134 prediction 0.902502351180434 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140113 chr20:56140113 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_106052 0 0 0 0 0 exosome 0 0.438717369568758 0.997158527374268 0 hPsi_site_5012 iPseU_CNN:0.997158527374268;iRNA_PseU:0 5013 chr1 44132643 44132643 1 + G A COAD 44132643 - 44132623 44132663 41 AGGGAAAGTGATCATAAACTCTCCAGCCTCTTGAGTCACCT AGGGAAAGTGATCATAAACTTTCCAGCCTCTTGAGTCACCT Direct Gain 0 0.951248665207506 0 0.997113347053528 prediction 0.902497330415012 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44132643 chr1:44132643 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106053 0 0 0 0 0 Nucleus 0 0.438700334305071 0.994226694107056 0 hPsi_site_5013 iPseU_CNN:0.994226694107056;iRNA_PseU:0 5014 chr4 114277491 114277491 1 + G A LUAD 114277491 - 114277471 114277511 41 TTTCTCCCCGTTTTCTGAATCATCCTCCTCTGCACATTCAT TTTCTCCCCGTTTTCTGAATTATCCTCCTCTGCACATTCAT Direct Gain 0 0.951247623673932 0 0.971316576004028 prediction 0.902495247347863 Functional Gain - ANK2 ENSG00000145362 CDS Human protein_coding chr4:114277491 chr4:114277491 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_106054 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859321611 0.942633152008056 0 hPsi_site_5014 iPseU_CNN:0.942633152008056;iRNA_PseU:0 5015 chr15 57731561 57731561 1 + C T HNSC 57731561 + 57731541 57731581 41 GGGAGCAGCGCACGGGGCTTCATGTGCCCACTCCAGGCCTC GGGAGCAGCGCACGGGGCTTTATGTGCCCACTCCAGGCCTC Direct Gain 0 0.951241098837259 0 0.999495983123779 prediction 0.902482197674518 Functional Gain - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57731561 chr15:57731561 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106055 0 0 0 0 0 cytosol 0 0.446359117774522 0.998991966247558 0 hPsi_site_5015 iPseU_CNN:0.998991966247558;iRNA_PseU:0 5016 chr16 11214578 11214578 1 + G A STAD 11214578 - 11214558 11214598 41 ACTCCCCAGCCAAGCCTGGACACATCAGGCTCCACCAAACT ACTCCCCAGCCAAGCCTGGATACATCAGGCTCCACCAAACT Direct Gain 0 0.951238126734509 0 0.99999874830246 prediction 0.902476253469018 Functional Gain - CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11214578 chr16:11214578 synonymous SNV . 0 21 hPsi_associated_SNPs_106056 0 0 0 0 0 Cytosol 0 0.438721677946641 0.99999749660492 0 hPsi_site_5016 iPseU_CNN:0.99999749660492;iRNA_PseU:0 5017 chr1 12304631 12304631 1 + C T SKCM 12304631 + 12304611 12304651 41 AGGGGAGTCCTATTGGTATTCAGTTACCGCCTCCGTAGTTA AGGGGAGTCCTATTGGTATTTAGTTACCGCCTCCGTAGTTA Direct Gain 0 0.951232816912132 0 0.957571148872375 prediction 0.902465633824265 Functional Gain - VPS13D ENSG00000048707 CDS Human protein_coding chr1:12304631 chr1:12304631 nonsynonymous SNV 0.953 3 21 hPsi_associated_SNPs_106057 0 0 1 0 2 Nucleus 0 0.438718592995251 0.91514229774475 0 hPsi_site_5017 iPseU_CNN:0.91514229774475;iRNA_PseU:0 5018 chr12 2800282 2800282 1 + G A LUAD 2800282 - 2800262 2800302 41 GCGCACACAGCCCGCGTCCTCTTCGCCCCCGGCTCGGTCCT GCGCACACAGCCCGCGTCCTTTTCGCCCCCGGCTCGGTCCT Direct Gain 0 0.951232657513627 0 0.982868194580078 prediction 0.902465315027255 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2800282 chr12:2800282 nonsynonymous SNV 0.029 0 21 hPsi_associated_SNPs_106058 0 0 0 0 0 Cytosol 0 0.438717879450733 0.965736389160156 0 hPsi_site_5018 iPseU_CNN:0.965736389160156;iRNA_PseU:0 5019 chr10 43625529 43625529 1 + C A rs183817000 43625529 - 43625509 43625549 41 TCAAGGATAAATTGGTCAAGGATAAATTCCCCATCACTGGG TCAAGGATAAATTGGTCAAGTATAAATTCCCCATCACTGGG Direct Gain 0 0.951229167151306 0 0.953435897827148 prediction 0.902458334302611 Functional Gain - RET ENSG00000165731 UTR3 Human protein_coding chr10:43625529 chr10:43625529 . . 0 21 hPsi_associated_SNPs_106059 0 0 0 0 0 Cytosol 0 0.438663029848643 0.906871795654296 0 hPsi_site_5019 iPseU_CNN:0.906871795654296;iRNA_PseU:0 5020 chr10 5772729 5772729 1 + C T SKCM 5772729 + 5772709 5772749 41 TGAAAAGTGCCCTTCAGAGTCTTTAACTCAGTTGAACTCTT TGAAAAGTGCCCTTCAGAGTTTTTAACTCAGTTGAACTCTT Direct Gain 0 0.951228164248149 0 0.00145819783210754 prediction 0.902456328496299 Functional Gain - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5772729 chr10:5772729 nonsynonymous SNV 0.909 1 21 hPsi_associated_SNPs_106060 0 0 1 0 0 Nucleus 0 0.438901137751543 0 0 hPsi_site_5020 iPseU_CNN:0;iRNA_PseU:0 5021 chr17 51901099 51901099 1 + C T SKCM 51901099 + 51901079 51901119 41 ACCTTAAAGGACCTGGATATCATCACCGTCCCCTCGGACAA ACCTTAAAGGACCTGGATATTATCACCGTCCCCTCGGACAA Direct Gain 0 0.951222662967162 0 0.834386944770813 prediction 0.902445325934325 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901099 chr17:51901099 synonymous SNV . 0 21 hPsi_associated_SNPs_106061 0 0 0 0 0 exosome 0 0.438718601689551 0.668773889541626 0 hPsi_site_5021 iPseU_CNN:0.668773889541626;iRNA_PseU:0 5022 chr16 82660665 82660665 1 + G A CESC 82660665 - 82660645 82660685 41 GAAGCGCCCGGCGGCGTTTTCATTCATGCACGCGGCTGCAC GAAGCGCCCGGCGGCGTTTTTATTCATGCACGCGGCTGCAC Direct Gain 0 0.951212176004563 0 0.997687757015228 prediction 0.902424352009126 Functional Gain - CDH13 ENSG00000140945 CDS Human protein_coding chr16:82660665 chr16:82660665 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106062 0 0 0 0 0 Nucleus 0 0.438719890478159 0.995375514030456 0 hPsi_site_5022 iPseU_CNN:0.995375514030456;iRNA_PseU:0 5023 chr6 123319049 123319049 1 + G T LUSC 123319049 + 123319029 123319069 41 ATATGGTCATCACCAGGCCGGACATTGGCTTTCTGCGCACG ATATGGTCATCACCAGGCCGTACATTGGCTTTCTGCGCACG Direct Gain 0 0.951195801776143 0 0.999972820281982 prediction 0.902391603552286 Functional Gain - CLVS2 ENSG00000146352 CDS Human protein_coding chr6:123319049 chr6:123319049 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106063 0 0 0 0 0 exosome 0 0.438740774805984 0.999945640563964 0 hPsi_site_5023 iPseU_CNN:0.999945640563964;iRNA_PseU:0 5024 chr2 56408643 56408643 1 + C A rs57123633 56408643 - 56408623 56408663 41 CTTTGGGATGATTGCCTCGTGTCCATAACATGGTTGGTGGA CTTTGGGATGATTGCCTCGTTTCCATAACATGGTTGGTGGA Direct Gain 0 0.951179434298663 0 0.530905365943909 prediction 0.902358868597327 Functional Gain - LOC100129434 ENSG00000272180 ncRNA_exonic Human lincRNA chr2:56408643 chr2:56408643 . . 0 21 hPsi_associated_SNPs_106064 0 0 0 0 0 unknown 0 0.438728699226337 0.061810731887818 0 hPsi_site_5024 iPseU_CNN:0.061810731887818;iRNA_PseU:0 5025 chr6 2769021 2769021 1 + G T UCEC 2769021 + 2769001 2769041 41 CCAAGACAAATGATGTGCGAGATGTCATAAAACAAGCTCAA CCAAGACAAATGATGTGCGATATGTCATAAAACAAGCTCAA Direct Gain 0 0.95117549445217 0 0.99045205116272 prediction 0.90235098890434 Functional Gain - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2769021 chr6:2769021 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106065 0 0 1 0 2 Ribosome 0 0.464811003503111 0.98090410232544 0 hPsi_site_5025 iPseU_CNN:0.98090410232544;iRNA_PseU:0 5026 chr19 19456163 19456163 1 + C T SKCM 19456163 + 19456143 19456183 41 GACAACGCGGAAGCCCAGTTCACCACGGCCCTGCGGGTAAG GACAACGCGGAAGCCCAGTTTACCACGGCCCTGCGGGTAAG Direct Gain 0 0.95117254080851 0 0.998416304588318 prediction 0.902345081617021 Functional Gain - MAU2 ENSG00000129933 CDS Human protein_coding chr19:19456163 chr19:19456163 synonymous SNV . 0 21 hPsi_associated_SNPs_106066 0 0 1 0 1 Nucleus 0 0.438718592994678 0.996832609176636 0 hPsi_site_5026 iPseU_CNN:0.996832609176636;iRNA_PseU:0 5027 chr12 104139016 104139016 1 + G A SKCM 104139016 - 104138996 104139036 41 GGGGCCTGTCCACCCCGTTTCACAGAGGCACTGCCCGGAGC GGGGCCTGTCCACCCCGTTTTACAGAGGCACTGCCCGGAGC Direct Gain 0 0.951171746912869 0 0.973745465278625 prediction 0.902343493825738 Functional Gain - STAB2 ENSG00000136011 CDS Human protein_coding chr12:104139016 chr12:104139016 nonsynonymous SNV 0.935 0 21 hPsi_associated_SNPs_106067 0 0 0 0 0 nucleoplasm 0 0.43871861476224 0.94749093055725 0 hPsi_site_5027 iPseU_CNN:0.94749093055725;iRNA_PseU:0 5028 chr16 67670658 67670658 1 + G A STAD 67670658 - 67670638 67670678 41 CACAGGCTGAGGCTCTGGCTCAGGTTCAATTTCTACGGCAG CACAGGCTGAGGCTCTGGCTTAGGTTCAATTTCTACGGCAG Direct Gain 0 0.951168349379158 0 0.994550824165344 prediction 0.902336698758317 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67670658 chr16:67670658 nonsynonymous SNV 0.983 1 21 hPsi_associated_SNPs_106068 0 0 0 0 0 Nucleus 0 0.438718299767733 0.989101648330688 0 hPsi_site_5028 iPseU_CNN:0.989101648330688;iRNA_PseU:0 5029 chr11 62439585 62439585 1 + G A BLCA 62439585 - 62439565 62439605 41 CACGGAGGCAAGTCCGGTCTCACGGTGACCTCCCGCCGGCG CACGGAGGCAAGTCCGGTCTTACGGTGACCTCCCGCCGGCG Direct Gain 0 0.951164928688123 0 0.000133275985717773 prediction 0.902329857376246 Functional Gain - UQCC3 ENSG00000204922 CDS Human protein_coding chr11:62439585 chr11:62439585 synonymous SNV . 0 21 hPsi_associated_SNPs_106069 0 0 1 0 0 Ribosome 0 0.438811860998304 0 0 hPsi_site_5029 iPseU_CNN:0;iRNA_PseU:0 5030 chr1 220872429 220872429 1 + G A rs11553966 220872429 - 220872409 220872449 41 TACAAAAGAAGTCTCTTGGTCAAGCACATCAAGCGAAAGCT TACAAAAGAAGTCTCTTGGTTAAGCACATCAAGCGAAAGCT Direct Gain 0 0.951161163043933 0 0.999624907970428 prediction 0.902322326087867 Functional Gain - C1orf115 ENSG00000162817 UTR3 Human protein_coding chr1:220872429 chr1:220872429 . . 0 21 hPsi_associated_SNPs_106070 0 0 0 0 0 Ribosome 0 0.438953104059275 0.999249815940856 0 hPsi_site_5030 iPseU_CNN:0.999249815940856;iRNA_PseU:0 5031 chr1 36056276 36056276 1 + G A LUSC 36056276 - 36056256 36056296 41 CTTGGCTGGGAACTCCGTCTCACAGACGTAACCGAAGTCTC CTTGGCTGGGAACTCCGTCTTACAGACGTAACCGAAGTCTC Direct Gain 0 0.951155379035843 0 0.999999403953552 prediction 0.902310758071685 Functional Gain - TFAP2E ENSG00000116819 CDS Human protein_coding chr1:36056276 chr1:36056276 nonsynonymous SNV 0.994 5 21 hPsi_associated_SNPs_106071 0 0 0 0 0 nucleoplasm 0 0.438718593029706 0.999998807907104 0 hPsi_site_5031 iPseU_CNN:0.999998807907104;iRNA_PseU:0 5032 chr1 64643185 64643185 1 + C A COAD 64643185 - 64643165 64643205 41 AGATAGAGATGGCCTTTATAGATTTTTCCAAAGGCACACTC AGATAGAGATGGCCTTTATATATTTTTCCAAAGGCACACTC Direct Gain 0 0.951155130154052 0 0.679807305335999 prediction 0.902310260308104 Functional Gain - ROR1 ENSG00000185483 CDS Human protein_coding chr1:64643185 chr1:64643185 synonymous SNV . 0 21 hPsi_associated_SNPs_106072 0 0 0 0 0 Nucleus 0 0.438718584095165 0.359614610671998 0 hPsi_site_5032 iPseU_CNN:0.359614610671998;iRNA_PseU:0 5033 chr10 60556160 60556160 1 + C A COAD 60556160 - 60556140 60556180 41 ACTGCTTTCAAGTCCGAGGAGACATTTCCTTGCTTCATACA ACTGCTTTCAAGTCCGAGGATACATTTCCTTGCTTCATACA Direct Gain 0 0.951154920328488 0 0.984996676445007 prediction 0.902309840656976 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60556160 chr10:60556160 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106073 0 0 1 0 0 nucleus 0 0.438767736015589 0.969993352890014 0 hPsi_site_5033 iPseU_CNN:0.969993352890014;iRNA_PseU:0 5034 chrX 151820005 151820005 1 + C T SKCM 151820005 + 151819985 151820025 41 ACAGGCTTAACTTCAATGCTCATCCTGACCACCATCGACTC ACAGGCTTAACTTCAATGCTTATCCTGACCACCATCGACTC Direct Gain 0 0.951154871843838 0 0.999895691871643 prediction 0.902309743687676 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151820005 chrX:151820005 synonymous SNV . 0 21 hPsi_associated_SNPs_106074 0 0 1 0 1 chromatin 0 0.438717151607173 0.999791383743286 0 hPsi_site_5034 iPseU_CNN:0.999791383743286;iRNA_PseU:0 5035 chr4 56734621 56734621 1 + G A SKCM 56734621 - 56734601 56734641 41 CGCATTCGAGATTGCATATTCACAGCCTTCCATCATTATTT CGCATTCGAGATTGCATATTTACAGCCTTCCATCATTATTT Direct Gain 0 0.951150013404837 0 0.959825277328491 prediction 0.902300026809673 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56734621 chr4:56734621 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_106075 0 0 0 0 0 Cytosol 0 0.438728791251363 0.919650554656982 0 hPsi_site_5035 iPseU_CNN:0.919650554656982;iRNA_PseU:0 5036 chr13 109538767 109538767 1 + C T rs147300581 109538767 + 109538747 109538787 41 AGCTCGGCTACGTCCAGGTTCTTGCCTCACGACCTGGAAAA AGCTCGGCTACGTCCAGGTTTTTGCCTCACGACCTGGAAAA Direct Gain 0 0.951147720905276 0 0.9711092710495 prediction 0.902295441810553 Functional Gain - MYO16 ENSG00000041515 UTR5 Human protein_coding chr13:109538767 chr13:109538767 . . 0 21 hPsi_associated_SNPs_106076 0 0 0 0 0 chromatin 0 0.438718511289791 0.942218542099 0 hPsi_site_5036 iPseU_CNN:0.942218542099;iRNA_PseU:0 5037 chr9 82323110 82323110 1 + C A STAD 82323110 - 82323090 82323130 41 GGCCTCAATCCGGGAGTAGAGTTACTGCCTGGGGTGGGCGC GGCCTCAATCCGGGAGTAGATTTACTGCCTGGGGTGGGCGC Direct Gain 0 0.951141053961147 0 0.883047103881836 prediction 0.902282107922295 Functional Gain - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82323110 chr9:82323110 nonsynonymous SNV 0.970 0 21 hPsi_associated_SNPs_106077 0 0 0 0 0 Endoplasmic reticulum 0 0.43871859299778 0.766094207763672 0 hPsi_site_5037 iPseU_CNN:0.766094207763672;iRNA_PseU:0 5038 chr20 30193696 30193696 1 + C T rs73235783 30193696 + 30193676 30193716 41 GAGGGCGTGGGCGCTTGCACCACTTCCGTCCCATCCTTGCG GAGGGCGTGGGCGCTTGCACTACTTCCGTCCCATCCTTGCG Direct Gain 0 0.951140812502739 0 0.999905645847321 prediction 0.902281625005478 Functional Gain - ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30193696 chr20:30193696 . . 0 21 hPsi_associated_SNPs_106078 0 0 1 0 0 Endoplasmic reticulum 0 0.438704085084198 0.999811291694642 0 hPsi_site_5038 iPseU_CNN:0.999811291694642;iRNA_PseU:0 5039 chr14 70925402 70925402 1 + A T LUSC 70925402 + 70925382 70925422 41 ACCAGGGATCATGTCTGCATAATCCTCCAAGATTGGGGGAA ACCAGGGATCATGTCTGCATTATCCTCCAAGATTGGGGGAA Direct Gain 0 0.951139021387133 0 0.882160425186157 prediction 0.902278042774267 Functional Gain - ADAM21 ENSG00000139985 CDS Human protein_coding chr14:70925402 chr14:70925402 nonsynonymous SNV 0.048 0 21 hPsi_associated_SNPs_106079 0 0 0 0 0 exosome 0 0.438718708586866 0.764320850372314 0 hPsi_site_5039 iPseU_CNN:0.764320850372314;iRNA_PseU:0 5040 chr4 87696775 87696775 1 + C A BLCA 87696775 - 87696755 87696795 41 TCAATACCAATGAAGGAAGTGACATGTCTAATGCTCTGTTA TCAATACCAATGAAGGAAGTTACATGTCTAATGCTCTGTTA Direct Gain 0 0.951137060921612 0 0.348434954881668 prediction 0.902274121843224 Functional Gain - PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87696775 chr4:87696775 stopgain 0.831 0 21 hPsi_associated_SNPs_106080 0 0 0 0 0 Ribosome 0 0.438700758206102 0 0 hPsi_site_5040 iPseU_CNN:0;iRNA_PseU:0 5041 chr9 140728854 140728854 1 + C T SKCM 140728854 + 140728834 140728874 41 TACGGGAACGTCAGCCGGTTCATCAACCACCACTGCGAGCC TACGGGAACGTCAGCCGGTTTATCAACCACCACTGCGAGCC Direct Gain 0 0.951135171695364 0 0.850676417350769 prediction 0.902270343390728 Functional Gain - EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140728854 chr9:140728854 synonymous SNV . 0 21 hPsi_associated_SNPs_106081 0 0 1 0 1 chromatin 0 0.438718595288337 0.701352834701538 0 hPsi_site_5041 iPseU_CNN:0.701352834701538;iRNA_PseU:0 5042 chr5 167642246 167642246 1 + G A SARC 167642246 - 167642226 167642266 41 ATCAGGGTTGCATCTATGGCCTTCCCTCCATCCCCGCAGCG ATCAGGGTTGCATCTATGGCTTTCCCTCCATCCCCGCAGCG Direct Gain 0 0.951131944431785 0 0.864256620407104 prediction 0.90226388886357 Functional Gain - TENM2 ENSG00000145934 CDS Human protein_coding chr5:167642246 chr5:167642246 synonymous SNV . 0 21 hPsi_associated_SNPs_106082 0 0 0 0 0 exosome 0 0.438683614263742 0.728513240814208 0 hPsi_site_5042 iPseU_CNN:0.728513240814208;iRNA_PseU:0 5043 chr7 116528204 116528204 1 + C T SKCM 116528204 + 116528184 116528224 41 CGTATAGCAGCAAAATTCATCATTCATGCCCCTCCTGGAGA CGTATAGCAGCAAAATTCATTATTCATGCCCCTCCTGGAGA Direct Gain 0 0.951122583971167 0 0.449840426445007 prediction 0.902245167942334 Functional Gain - CAPZA2 ENSG00000198898 CDS Human protein_coding chr7:116528204 chr7:116528204 synonymous SNV . 0 21 hPsi_associated_SNPs_106083 0 0 1 0 2 Ribosome 0 0.438709860716682 0 0 hPsi_site_5043 iPseU_CNN:0;iRNA_PseU:0 5044 chr7 92078169 92078169 1 + G A OV 92078169 - 92078149 92078189 41 TTTTCAATTTAAATATATGTCTTCTCCCTTTTCCTTTGGTG TTTTCAATTTAAATATATGTTTTCTCCCTTTTCCTTTGGTG Direct Gain 0 0.951119759346874 0 0.767045259475708 prediction 0.902239518693749 Functional Gain - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92078169 chr7:92078169 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106084 0 0 0 0 0 Ribosome 0 0.438718593074783 0.534090518951416 0 hPsi_site_5044 iPseU_CNN:0.534090518951416;iRNA_PseU:0 5045 chr19 1058868 1058868 1 + G A UCEC 1058868 - 1058848 1058888 41 CACCCGCTCCCGTTCACGGGCTACATCCTCGTCCTCCTCTC CACCCGCTCCCGTTCACGGGTTACATCCTCGTCCTCCTCTC Direct Gain 0 0.951113388020634 0 0.848711252212524 prediction 0.902226776041267 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1058868 chr19:1058868 nonsynonymous SNV 0.425 2 21 hPsi_associated_SNPs_106085 0 0 0 0 0 Endoplasmic reticulum 0 0.438721902849003 0.697422504425048 0 hPsi_site_5045 iPseU_CNN:0.697422504425048;iRNA_PseU:0 5046 chr6 79607626 79607626 1 + C T STAD 79607626 + 79607606 79607646 41 AAGCTAGATAGCTCTGTTGTCATCAGCCCACCCCAGTTCTA AAGCTAGATAGCTCTGTTGTTATCAGCCCACCCCAGTTCTA Direct Gain 0 0.951106112872035 0 0.00329875946044922 prediction 0.90221222574407 Functional Gain - IRAK1BP1 ENSG00000146243 CDS Human protein_coding chr6:79607626 chr6:79607626 synonymous SNV . 0 21 hPsi_associated_SNPs_106086 0 0 0 0 2 cytosol 0 0.438684210637783 0 0 hPsi_site_5046 iPseU_CNN:0;iRNA_PseU:0 5047 chr9 990186 990186 1 + G A SKCM 990186 - 990166 990206 41 ACAGCGTATCCCCCTTCCTCCACGGACACTATCTCAGGGCT ACAGCGTATCCCCCTTCCTCTACGGACACTATCTCAGGGCT Direct Gain 0 0.951102050987681 0 0.999890148639679 prediction 0.902204101975362 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990186 chr9:990186 synonymous SNV . 0 21 hPsi_associated_SNPs_106087 0 0 0 0 0 unknown 0 0.438718571473899 0.999780297279358 0 hPsi_site_5047 iPseU_CNN:0.999780297279358;iRNA_PseU:0 5048 chr19 35232780 35232780 1 + C A BLCA 35232780 - 35232760 35232800 41 GTAAGGTTTGAACTACAGCTGAAGGTCTTCCCACATTTAAT GTAAGGTTTGAACTACAGCTTAAGGTCTTCCCACATTTAAT Direct Gain 0 0.951098339435568 0 0.999784111976624 prediction 0.902196678871136 Functional Gain - ZNF181 ENSG00000197841 CDS Human protein_coding chr19:35232780 chr19:35232780 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_106088 0 0 0 0 0 nucleus 0 0.438718596645626 0.999568223953248 0 hPsi_site_5048 iPseU_CNN:0.999568223953248;iRNA_PseU:0 5049 chr1 179380336 179380336 1 + G T COAD 179380336 + 179380316 179380356 41 AAAGAGAAAGGATGGAGAATGATATGAAAAAGTTAGTGGCA AAAGAGAAAGGATGGAGAATTATATGAAAAAGTTAGTGGCA Direct Gain 0 0.951094770761323 0 0.981152176856995 prediction 0.902189541522645 Functional Gain - AXDND1 ENSG00000162779 CDS Human protein_coding chr1:179380336 chr1:179380336 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106089 0 0 0 0 2 cytosol 0 0.438722970848195 0.96230435371399 0 hPsi_site_5049 iPseU_CNN:0.96230435371399;iRNA_PseU:0 5050 chr17 48628570 48628570 1 + G A rs139662050 48628570 - 48628550 48628590 41 ATCCTACAGACAGGCTCGGTCTCAGGTGTGCTGCCCCACCA ATCCTACAGACAGGCTCGGTTTCAGGTGTGCTGCCCCACCA Direct Gain 0 0.951092341111856 0 0.0496693253517151 prediction 0.902184682223713 Functional Gain - SPATA20 ENSG00000006282 intronic Human protein_coding chr17:48628570 chr17:48628570 . . 0 21 hPsi_associated_SNPs_106090 0 0 0 0 0 nucleus 0 0.437257440183266 0 0 hPsi_site_5050 iPseU_CNN:0;iRNA_PseU:0 5051 chr19 46717082 46717082 1 + C T rs139078284 46717082 + 46717062 46717102 41 GCCGCTTTCTGTTTGTGACTCTCCCTGCCTCCACTCCCCCC GCCGCTTTCTGTTTGTGACTTTCCCTGCCTCCACTCCCCCC Direct Gain 0 0.951091996456661 0 0.928687334060669 prediction 0.902183992913321 Functional Gain - LOC93429 ENSG00000268460 ncRNA_exonic Human processed_transcript chr19:46717082 chr19:46717082 . . 0 21 hPsi_associated_SNPs_106091 0 0 0 0 1 unknown 0 0.438718611323808 0.857374668121338 0 hPsi_site_5051 iPseU_CNN:0.857374668121338;iRNA_PseU:0 5052 chr11 34163346 34163346 1 + G A STAD 34163346 - 34163326 34163366 41 ACTAGGTCGTCACTGAGGGTCTTCATCGTGGGCTCCATGAC ACTAGGTCGTCACTGAGGGTTTTCATCGTGGGCTCCATGAC Direct Gain 0 0.951091965368253 0 0.999145209789276 prediction 0.902183930736506 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34163346 chr11:34163346 synonymous SNV . 0 21 hPsi_associated_SNPs_106092 0 0 0 0 0 chromatin 0 0.43928828557411 0.998290419578552 0 hPsi_site_5052 iPseU_CNN:0.998290419578552;iRNA_PseU:0 5053 chr16 81303970 81303970 1 + C T SKCM 81303970 + 81303950 81303990 41 TTCAAGGAGAACTCCAGGCTCACCTCGGTCCCCACCCTCAG TTCAAGGAGAACTCCAGGCTTACCTCGGTCCCCACCCTCAG Direct Gain 0 0.95108832127305 0 0.99949848651886 prediction 0.9021766425461 Functional Gain - BCO1 ENSG00000135697 CDS Human protein_coding chr16:81303970 chr16:81303970 synonymous SNV . 0 21 hPsi_associated_SNPs_106093 0 0 0 0 1 exosome 0 0.438718307003546 0.99899697303772 0 hPsi_site_5053 iPseU_CNN:0.99899697303772;iRNA_PseU:0 5054 chr12 98927852 98927852 1 + C T LUSC 98927852 + 98927832 98927872 41 AGCTGCACAGATTCTTAGCTCAGATCCTAGTCGTACCCACC AGCTGCACAGATTCTTAGCTTAGATCCTAGTCGTACCCACC Direct Gain 0 0.951086044927304 0 0.999998211860657 prediction 0.902172089854608 Functional Gain - TMPO ENSG00000120802 CDS Human protein_coding chr12:98927852 chr12:98927852 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106094 0 0 1 0 0 Ribosome 0 0.438719012529956 0.999996423721314 0 hPsi_site_5054 iPseU_CNN:0.999996423721314;iRNA_PseU:0 5055 chr3 112066493 112066493 1 + C T SKCM 112066493 + 112066473 112066513 41 GCCCGCCCAGCCCCCATGGTCTTCTGGAAGGTCCCTCGGTC GCCCGCCCAGCCCCCATGGTTTTCTGGAAGGTCCCTCGGTC Direct Gain 0 0.951079745866784 0 0.958492279052734 prediction 0.902159491733567 Functional Gain - CD200 ENSG00000091972 CDS Human protein_coding chr3:112066493 chr3:112066493 synonymous SNV . 0 21 hPsi_associated_SNPs_106095 0 0 0 0 2 Endoplasmic reticulum 0 0.438718625410804 0.916984558105468 0 hPsi_site_5055 iPseU_CNN:0.916984558105468;iRNA_PseU:0 5056 chrX 152770170 152770170 1 + C A UCEC 152770170 - 152770150 152770190 41 AATGGCCCATCGTCCAGGGTGAAGTCCCAGAAGCCTCTCTG AATGGCCCATCGTCCAGGGTTAAGTCCCAGAAGCCTCTCTG Direct Gain 0 0.95107286834637 0 0.999999761581421 prediction 0.90214573669274 Functional Gain - BGN ENSG00000182492 CDS Human protein_coding chrX:152770170 chrX:152770170 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106096 0 0 0 0 0 Cytosol 0 0.438716753877398 0.999999523162842 0 hPsi_site_5056 iPseU_CNN:0.999999523162842;iRNA_PseU:0 5057 chr9 140852127 140852127 1 + C A UCEC 140852127 - 140852107 140852147 41 AGACTCACCAACAGCACAGAGATCTGCAAACCGGTCCTCTC AGACTCACCAACAGCACAGATATCTGCAAACCGGTCCTCTC Direct Gain 0 0.951063745257487 0 0.39384937286377 prediction 0.902127490514974 Functional Gain - CACNA1B ENSG00000148408 CDS Human protein_coding chr9:140852127 chr9:140852127 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_106097 0 0 0 0 0 exosome 0 0.436771204434051 0 0 hPsi_site_5057 iPseU_CNN:0;iRNA_PseU:0 5058 chr2 232123764 232123764 1 + G A UCEC 232123764 - 232123744 232123784 41 AAGCGGTCACTCCCCAAAATCAAATCCTTCTTCAGTTTCTC AAGCGGTCACTCCCCAAAATTAAATCCTTCTTCAGTTTCTC Direct Gain 0 0.951060278866354 0 0.968638062477112 prediction 0.902120557732708 Functional Gain - ARMC9 ENSG00000135931 CDS Human protein_coding chr2:232123764 chr2:232123764 synonymous SNV . 0 21 hPsi_associated_SNPs_106098 0 0 0 0 0 membrane 0 0.438718592950108 0.937276124954224 0 hPsi_site_5058 iPseU_CNN:0.937276124954224;iRNA_PseU:0 5059 chr22 32218727 32218727 1 + C A rs61731667 32218727 - 32218707 32218747 41 GAAAGCTCCTCTGTTCCACTGAAGTTCAAGAAGGACATGCC GAAAGCTCCTCTGTTCCACTTAAGTTCAAGAAGGACATGCC Direct Gain 0 0.951059153028342 0 0.999657154083252 prediction 0.902118306056685 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32218727 chr22:32218727 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106099 2 0 0 0 0 chromatin 0 0.438695673154003 0.999314308166504 0 hPsi_site_5059 iPseU_CNN:0.999314308166504;iRNA_PseU:0 5060 chr4 166408697 166408697 1 + A T LUAD 166408697 + 166408677 166408717 41 TGAAGACCTACTGGGAGGATAACAAAAACTCCCTCATTAGC TGAAGACCTACTGGGAGGATTACAAAAACTCCCTCATTAGC Direct Gain 0 0.951053378576893 0 0.878766059875488 prediction 0.902106757153785 Functional Gain - CPE ENSG00000109472 CDS Human protein_coding chr4:166408697 chr4:166408697 nonsynonymous SNV 0.990 4 21 hPsi_associated_SNPs_106100 0 0 1 0 1 Ribosome 0 0.438719122561034 0.757532119750976 0 hPsi_site_5060 iPseU_CNN:0.757532119750976;iRNA_PseU:0 5061 chr14 74567871 74567871 1 + C A BLCA 74567871 - 74567851 74567891 41 TCCATCAAATTAGCCGTGGTGAGACTCCCCAGTTCTGAAAC TCCATCAAATTAGCCGTGGTTAGACTCCCCAGTTCTGAAAC Direct Gain 0 0.951049011931319 0 0.994430541992188 prediction 0.902098023862639 Functional Gain - LIN52 ENSG00000205659 CDS Human protein_coding chr14:74567871 chr14:74567871 synonymous SNV . 0 21 hPsi_associated_SNPs_106101 0 0 0 0 0 chromatin 0 0.438209481472479 0.988861083984376 0 hPsi_site_5061 iPseU_CNN:0.988861083984376;iRNA_PseU:0 5062 chr12 55523903 55523903 1 + C A LUAD 55523903 - 55523883 55523923 41 GCCACACAGCCTGCAAAGGAGATAGACTTGTTTTCAGACCA GCCACACAGCCTGCAAAGGATATAGACTTGTTTTCAGACCA Direct Gain 0 0.951043917975638 0 0.999682247638702 prediction 0.902087835951276 Functional Gain - OR9K2 ENSG00000170605 CDS Human protein_coding chr12:55523903 chr12:55523903 synonymous SNV . 0 21 hPsi_associated_SNPs_106102 0 0 0 0 0 unknown 0 0.438914903653955 0.999364495277404 0 hPsi_site_5062 iPseU_CNN:0.999364495277404;iRNA_PseU:0 5063 chr5 153054110 153054110 1 + G A SKCM 153054110 - 153054090 153054130 41 TTCACCAGCTGGAAACCTGTCACATTGGCGCCACTCTCCTT TTCACCAGCTGGAAACCTGTTACATTGGCGCCACTCTCCTT Direct Gain 0 0.951041921094323 0 0.999931693077087 prediction 0.902083842188647 Functional Gain - GRIA1 ENSG00000155511 CDS Human protein_coding chr5:153054110 chr5:153054110 synonymous SNV . 0 21 hPsi_associated_SNPs_106103 0 0 0 0 0 exosome 0 0.439131993154124 0.999863386154174 0 hPsi_site_5063 iPseU_CNN:0.999863386154174;iRNA_PseU:0 5064 chr14 74665876 74665876 1 + A T rs528762907 74665876 + 74665856 74665896 41 AGAATCTGCTCTACCCAAGGATCATTGCAGTTACTCAATCA AGAATCTGCTCTACCCAAGGTTCATTGCAGTTACTCAATCA Direct Gain 0 0.951037485195002 0 0.999903917312622 prediction 0.902074970390005 Functional Gain - LIN52 ENSG00000205659 UTR3 Human protein_coding chr14:74665876 chr14:74665876 . . 0 21 hPsi_associated_SNPs_106104 0 0 1 2 0 chromatin 0 0.438724551449898 0.999807834625244 0 hPsi_site_5064 iPseU_CNN:0.999807834625244;iRNA_PseU:0 5065 chr6 49518766 49518766 1 + G T COAD 49518766 + 49518746 49518786 41 CGTGAGTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCA CGTGAGTCCTGGGTCAGAGATAAAGTGCTCTTTCTCCTGCA Direct Gain 0 0.951037450926292 0 0.35993230342865 prediction 0.902074901852583 Functional Gain - C6orf141 ENSG00000197261 CDS Human protein_coding chr6:49518766 chr6:49518766 nonsynonymous SNV 0.962 0 21 hPsi_associated_SNPs_106105 0 0 0 0 0 exosome 0 0.438715254432452 0 0 hPsi_site_5065 iPseU_CNN:0;iRNA_PseU:0 5066 chr8 41479406 41479406 1 + G A rs117597328 41479406 - 41479386 41479426 41 ACCAGCCAGTTTTATTTACTCACAAGAACAAATCCAAAGCC ACCAGCCAGTTTTATTTACTTACAAGAACAAATCCAAAGCC Direct Gain 0 0.951035451242732 0 0.988003373146057 prediction 0.902070902485463 Functional Gain - GPAT4 ENSG00000158669 UTR3 Human protein_coding chr8:41479406 chr8:41479406 . . 0 21 hPsi_associated_SNPs_106106 0 0 0 0 0 Ribosome 0 0.438718586584666 0.976006746292114 0 hPsi_site_5066 iPseU_CNN:0.976006746292114;iRNA_PseU:0 5067 chr15 74883752 74883752 1 + C A OV 74883752 - 74883732 74883772 41 TCCTGAGAGTGGTTGCTGGGGATATCCGAGGGCTACTGGTA TCCTGAGAGTGGTTGCTGGGTATATCCGAGGGCTACTGGTA Direct Gain 0 0.951031754803016 0 0.999075293540955 prediction 0.902063509606031 Functional Gain - ARID3B ENSG00000179361 CDS Human protein_coding chr15:74883752 chr15:74883752 nonsynonymous SNV 0.970 2 21 hPsi_associated_SNPs_106107 0 0 0 0 0 Nucleus 0 0.438718592972297 0.99815058708191 0 hPsi_site_5067 iPseU_CNN:0.99815058708191;iRNA_PseU:0 5068 chr1 28206495 28206495 1 + C T BLCA 28206495 + 28206475 28206515 41 GCCCTGAAAGACCTCGTCCTCACCTGCCCCACCCTGCCCTG GCCCTGAAAGACCTCGTCCTTACCTGCCCCACCCTGCCCTG Direct Gain 0 0.951028492237206 0 0.996509432792664 prediction 0.902056984474412 Functional Gain - THEMIS2 ENSG00000130775 CDS Human protein_coding chr1:28206495 chr1:28206495 synonymous SNV . 0 21 hPsi_associated_SNPs_106108 0 0 0 0 1 chromatin 0 0.43527262437918 0.993018865585328 0 hPsi_site_5068 iPseU_CNN:0.993018865585328;iRNA_PseU:0 5069 chr11 62649510 62649510 1 + C A CHOL 62649510 - 62649490 62649530 41 TTAGCCGATTGCAAGAGACTGTCAAAATCTTCCTTGGAGCC TTAGCCGATTGCAAGAGACTTTCAAAATCTTCCTTGGAGCC Direct Gain 0 0.951017766338935 0 0.995069265365601 prediction 0.90203553267787 Functional Gain - SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62649510 chr11:62649510 nonsynonymous SNV 0.085 1 21 hPsi_associated_SNPs_106109 0 0 0 0 0 Nucleus 0 0.438718594409579 0.990138530731202 0 hPsi_site_5069 iPseU_CNN:0.990138530731202;iRNA_PseU:0 5070 chr1 172050998 172050998 1 + C T UCEC 172050998 + 172050978 172051018 41 CTATTGATTGACATTCAAGTCTCTTACATCAACACCAACCA CTATTGATTGACATTCAAGTTTCTTACATCAACACCAACCA Direct Gain 0 0.951016432401825 0 0.871267676353455 prediction 0.90203286480365 Functional Gain - DNM3 ENSG00000197959 CDS Human protein_coding chr1:172050998 chr1:172050998 synonymous SNV . 0 21 hPsi_associated_SNPs_106110 0 0 0 0 2 nucleus 0 0.44126116647803 0.74253535270691 0 hPsi_site_5070 iPseU_CNN:0.74253535270691;iRNA_PseU:0 5071 chr19 51650058 51650058 1 + G A SARC 51650058 - 51650038 51650078 41 GACCAGGGCTGTGGCTCCAGCTCCCCCGACCGCCCCCAGCA GACCAGGGCTGTGGCTCCAGTTCCCCCGACCGCCCCCAGCA Direct Gain 0 0.951001752027428 0 0.990906000137329 prediction 0.902003504054855 Functional Gain - SIGLEC7 ENSG00000168995 CDS Human protein_coding chr19:51650058 chr19:51650058 nonsynonymous SNV 0.014 2 21 hPsi_associated_SNPs_106111 0 0 0 0 0 exosome 0 0.438718556954978 0.981812000274658 0 hPsi_site_5071 iPseU_CNN:0.981812000274658;iRNA_PseU:0 5072 chr17 32965899 32965899 1 + C T rs562629936 32965899 + 32965879 32965919 41 GCCAGGCACCTTCCTGAGTTCTCAGGACTCCCACCTCTGCC GCCAGGCACCTTCCTGAGTTTTCAGGACTCCCACCTCTGCC Direct Gain 0 0.950994152148513 0 0.994474232196808 prediction 0.901988304297026 Functional Gain - TMEM132E ENSG00000181291 UTR3 Human protein_coding chr17:32965899 chr17:32965899 . . 0 21 hPsi_associated_SNPs_106112 0 0 1 2 0 exosome 0 0.43871826097619 0.988948464393616 0 hPsi_site_5072 iPseU_CNN:0.988948464393616;iRNA_PseU:0 5073 chr16 55725892 55725892 1 + C T LUAD 55725892 + 55725872 55725912 41 GTGCTCCTGGTCCATGGCGTCACGCTGCCCGGAGCCTCCAA GTGCTCCTGGTCCATGGCGTTACGCTGCCCGGAGCCTCCAA Direct Gain 0 0.950988315992363 0 0.999945044517517 prediction 0.901976631984725 Functional Gain - SLC6A2 ENSG00000103546 CDS Human protein_coding chr16:55725892 chr16:55725892 synonymous SNV . 0 21 hPsi_associated_SNPs_106113 0 0 0 0 2 exosome 0 0.43872064128789 0.999890089035034 0 hPsi_site_5073 iPseU_CNN:0.999890089035034;iRNA_PseU:0 5074 chr6 26205020 26205020 1 + C T COAD 26205020 + 26205000 26205040 41 GTGTCAAGCGCATTTCTGGTCTCATCTACGAGGAGACTCGC GTGTCAAGCGCATTTCTGGTTTCATCTACGAGGAGACTCGC Direct Gain 0 0.950985559884087 0 0.996206045150757 prediction 0.901971119768174 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26205020 chr6:26205020 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_106114 0 0 1 0 0 Nucleus 0 0.438961443245973 0.992412090301514 0 hPsi_site_5074 iPseU_CNN:0.992412090301514;iRNA_PseU:0 5075 chr2 220493868 220493868 1 + C T SKCM 220493868 + 220493848 220493888 41 GATCTCCTGCACCCCCAGTTCACCGGCACACATCCCACCAC GATCTCCTGCACCCCCAGTTTACCGGCACACATCCCACCAC Direct Gain 0 0.9509852126958 0 0.951131463050842 prediction 0.901970425391601 Functional Gain - SLC4A3 ENSG00000114923 CDS Human protein_coding chr2:220493868 chr2:220493868 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106115 0 0 1 0 1 Cytosol 0 0.438121507716426 0.902262926101684 0 hPsi_site_5075 iPseU_CNN:0.902262926101684;iRNA_PseU:0 5076 chr20 54967709 54967709 1 + C T rs35594166 54967709 + 54967689 54967729 41 GCTCGGAGCGGTAGATTGGGCAGGATTCGCGCCTCCATTTT GCTCGGAGCGGTAGATTGGGTAGGATTCGCGCCTCCATTTT Direct Gain 0 0.950981931785821 0 0.999953269958496 prediction 0.901963863571642 Functional Gain - CSTF1 ENSG00000101138 UTR5 Human protein_coding chr20:54967709 chr20:54967709 . . 0 21 hPsi_associated_SNPs_106116 0 0 1 0 1 Cytosol 0 0.438706507809978 0.999906539916992 0 hPsi_site_5076 iPseU_CNN:0.999906539916992;iRNA_PseU:0 5077 chr8 69434106 69434106 1 + G A STAD 69434106 - 69434086 69434126 41 AGCAGCTAGGGGATCAGCATCATTTTCTTCTCTACCAATCC AGCAGCTAGGGGATCAGCATTATTTTCTTCTCTACCAATCC Direct Gain 0 0.95098077991839 0 0.999286711215973 prediction 0.901961559836781 Functional Gain - C8orf34 ENSG00000165084 CDS Human protein_coding chr8:69434106 chr8:69434106 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_106117 0 0 0 0 0 exosome 0 0.438720629938334 0.998573422431946 0 hPsi_site_5077 iPseU_CNN:0.998573422431946;iRNA_PseU:0 5078 chr7 49842409 49842409 1 + G T LUAD 49842409 + 49842389 49842429 41 TGGACCCTGTGTACGAGCCTGATCAGTGCTGTCCCATCTGC TGGACCCTGTGTACGAGCCTTATCAGTGCTGTCCCATCTGC Direct Gain 0 0.950976832167123 0 0.990825712680817 prediction 0.901953664334245 Functional Gain - VWC2 ENSG00000188730 CDS Human protein_coding chr7:49842409 chr7:49842409 nonsynonymous SNV 0.978 4 21 hPsi_associated_SNPs_106118 0 0 0 0 1 exosome 0 0.438566130964666 0.981651425361634 0 hPsi_site_5078 iPseU_CNN:0.981651425361634;iRNA_PseU:0 5079 chr11 65348725 65348725 1 + G A rs79021529 65348725 - 65348705 65348745 41 GCTGGGGGTGCAGGAGCACTCACAGGGGCTGGGCTGGTATC GCTGGGGGTGCAGGAGCACTTACAGGGGCTGGGCTGGTATC Direct Gain 0 0.950976190802869 0 0.999519348144531 prediction 0.901952381605737 Functional Gain - EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65348725 chr11:65348725 synonymous SNV . 0 21 hPsi_associated_SNPs_106119 0 0 0 0 0 chromatin 0 0.438718649583926 0.999038696289062 0 hPsi_site_5079 iPseU_CNN:0.999038696289062;iRNA_PseU:0 5080 chr16 13002653 13002653 1 + A T rs373814390 13002653 + 13002633 13002673 41 TGGTGGAGGCGTTGGTGAGAAATGACCTTGGGGACAGAAGC TGGTGGAGGCGTTGGTGAGATATGACCTTGGGGACAGAAGC Direct Gain 0 0.950971346740207 0 0.650463998317719 prediction 0.901942693480414 Functional Gain - SHISA9 ENSG00000237515 UTR3 Human protein_coding chr16:13002653 chr16:13002653 . . 0 21 hPsi_associated_SNPs_106120 0 0 0 0 0 exosome 0 0.43888907682862 0.300927996635438 0 hPsi_site_5080 iPseU_CNN:0.300927996635438;iRNA_PseU:0 5081 chrX 102946424 102946424 1 + G T rs5945800 102946424 + 102946404 102946444 41 ATTAGTTGGGCACCCTTGGGGAGGGTGCAACCTGCCCAACA ATTAGTTGGGCACCCTTGGGTAGGGTGCAACCTGCCCAACA Direct Gain 0 0.95096853505006 0 0.921042919158936 prediction 0.90193707010012 Functional Gain - MORF4L2-AS1 ENSG00000231154 ncRNA_exonic Human antisense chrX:102946424 chrX:102946424 . . 0 21 hPsi_associated_SNPs_106121 0 0 0 0 1 unknown 0 0.438718688754331 0.842085838317872 0 hPsi_site_5081 iPseU_CNN:0.842085838317872;iRNA_PseU:0 5082 chr3 47044731 47044731 1 + G A BLCA 47044731 - 47044711 47044751 41 AGCAACTCGGGTGGGGTGCTCACTTTGGCCTCTTTGGTCAC AGCAACTCGGGTGGGGTGCTTACTTTGGCCTCTTTGGTCAC Direct Gain 0 0.950959013728647 0 0.998166561126709 prediction 0.901918027457294 Functional Gain - NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47044731 chr3:47044731 synonymous SNV . 0 21 hPsi_associated_SNPs_106122 0 0 0 0 0 Nucleus 0 0.438717497953801 0.996333122253418 0 hPsi_site_5082 iPseU_CNN:0.996333122253418;iRNA_PseU:0 5083 chr1 114442568 114442568 1 + C A STAD 114442568 - 114442548 114442588 41 AGCTTCGAGGGTACTGCACGGATGTGTCTGCGGACTTTGCA AGCTTCGAGGGTACTGCACGTATGTGTCTGCGGACTTTGCA Direct Gain 0 0.950955334297816 0 0.999668717384338 prediction 0.901910668595632 Functional Gain - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442568 chr1:114442568 nonsynonymous SNV 0.934 4 21 hPsi_associated_SNPs_106123 0 0 1 0 1 chromatin 0 0.439285896196981 0.999337434768676 0 hPsi_site_5083 iPseU_CNN:0.999337434768676;iRNA_PseU:0 5084 chrX 68750812 68750812 1 + G T rs376724117 68750812 + 68750792 68750832 41 CGATCTCCATGGGGAGGAGGGACTTAAGCCCAAGTGGGTCA CGATCTCCATGGGGAGGAGGTACTTAAGCCCAAGTGGGTCA Direct Gain 0 0.95095263545938 0 0.999934434890747 prediction 0.90190527091876 Functional Gain - FAM155B ENSG00000130054 UTR3 Human protein_coding chrX:68750812 chrX:68750812 . . 0 21 hPsi_associated_SNPs_106124 0 0 1 0 0 exosome 0 0.438718504828966 0.999868869781494 0 hPsi_site_5084 iPseU_CNN:0.999868869781494;iRNA_PseU:0 5085 chr20 60883474 60883474 1 + C T STAD 60883474 + 60883454 60883494 41 TCGGGGCAGCTGGGCCCCCTCATGTGCCAGTTCGGTCTGCC TCGGGGCAGCTGGGCCCCCTTATGTGCCAGTTCGGTCTGCC Direct Gain 0 0.950947246496855 0 0.920537710189819 prediction 0.90189449299371 Functional Gain - ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60883474 chr20:60883474 synonymous SNV . 0 21 hPsi_associated_SNPs_106125 0 0 1 0 2 Ribosome 0 0.438718586299538 0.841075420379638 0 hPsi_site_5085 iPseU_CNN:0.841075420379638;iRNA_PseU:0 5086 chr12 55715310 55715310 1 + C T SKCM 55715310 + 55715290 55715330 41 GCAAGGAAGACTGTATTTTTCACAAGCACATGAAATGGTAT GCAAGGAAGACTGTATTTTTTACAAGCACATGAAATGGTAT Direct Gain 0 0.950938982154432 0 0.885434687137604 prediction 0.901877964308865 Functional Gain - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55715310 chr12:55715310 synonymous SNV . 0 21 hPsi_associated_SNPs_106126 0 0 0 0 0 unknown 0 0.438722739162355 0.770869374275208 0 hPsi_site_5086 iPseU_CNN:0.770869374275208;iRNA_PseU:0 5087 chr17 43138781 43138781 1 + G A LUSC 43138781 - 43138761 43138801 41 TTCTCGCAATCGCTGCAGTGCTCATGGCCGTTCCCGTTCCC TTCTCGCAATCGCTGCAGTGTTCATGGCCGTTCCCGTTCCC Direct Gain 0 0.950938893764216 0 0.998902559280396 prediction 0.901877787528433 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43138781 chr17:43138781 synonymous SNV . 0 21 hPsi_associated_SNPs_106127 0 0 0 0 0 Ribosome 0 0.438718583676369 0.997805118560792 0 hPsi_site_5087 iPseU_CNN:0.997805118560792;iRNA_PseU:0 5088 chr1 55457696 55457696 1 + G T UCEC 55457696 + 55457676 55457716 41 AGAGCATCAGCCTTGCTCTTGATGCCGTTTCTGCGGAGACG AGAGCATCAGCCTTGCTCTTTATGCCGTTTCTGCGGAGACG Direct Gain 0 0.950935907476115 0 0.991373956203461 prediction 0.90187181495223 Functional Gain - TMEM61 ENSG00000143001 CDS Human protein_coding chr1:55457696 chr1:55457696 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_106128 0 0 0 0 0 Cytosol 0 0.438722799256048 0.982747912406922 0 hPsi_site_5088 iPseU_CNN:0.982747912406922;iRNA_PseU:0 5089 chr5 176022636 176022636 1 + C A LUAD 176022636 - 176022616 176022656 41 CCAGGCCAGCGTTGGTGTAGGATGGCCCCTCCAGCTGTCCA CCAGGCCAGCGTTGGTGTAGTATGGCCCCTCCAGCTGTCCA Direct Gain 0 0.950922649766844 0 0.998165130615234 prediction 0.901845299533688 Functional Gain - CDHR2 ENSG00000074276 CDS Human protein_coding chr5:176022636 chr5:176022636 nonsynonymous SNV 0.190 1 21 hPsi_associated_SNPs_106129 0 0 0 0 0 Exosome 0 0.43866940331111 0.996330261230468 0 hPsi_site_5089 iPseU_CNN:0.996330261230468;iRNA_PseU:0 5090 chr1 159166750 159166750 1 + G T LUSC 159166750 + 159166730 159166770 41 ATGACCCAGGAGAGTGCCCTGATCTTCCCTTTCCTCAACAA ATGACCCAGGAGAGTGCCCTTATCTTCCCTTTCCTCAACAA Direct Gain 0 0.95092057591319 0 0.998536586761475 prediction 0.90184115182638 Functional Gain - CADM3 ENSG00000162706 CDS Human protein_coding chr1:159166750 chr1:159166750 synonymous SNV . 0 21 hPsi_associated_SNPs_106130 0 0 0 0 1 exosome 0 0.438722746146131 0.99707317352295 0 hPsi_site_5090 iPseU_CNN:0.99707317352295;iRNA_PseU:0 5091 chr10 43650700 43650700 1 + G A STAD 43650700 - 43650680 43650720 41 ATTTCCATCAGTCTGGGGGGCACATTCCAGGAGGTACATAA ATTTCCATCAGTCTGGGGGGTACATTCCAGGAGGTACATAA Direct Gain 0 0.950919976781192 0 0.981633067131042 prediction 0.901839953562384 Functional Gain - CSGALNACT2 ENSG00000169826 CDS Human protein_coding chr10:43650700 chr10:43650700 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106131 0 0 0 0 0 Endoplasmic reticulum 0 0.43916106836058 0.963266134262084 0 hPsi_site_5091 iPseU_CNN:0.963266134262084;iRNA_PseU:0 5092 chr19 48346462 48346462 1 + G A rs4081725 48346462 - 48346442 48346482 41 CTTCTCAGGGAGGCTCCTGGCTTCTTCCTTCTGTCCCCACC CTTCTCAGGGAGGCTCCTGGTTTCTTCCTTCTGTCCCCACC Direct Gain 0 0.950915632079272 0 0.768976449966431 prediction 0.901831264158544 Functional Gain - CRX ENSG00000105392 UTR3 Human protein_coding chr19:48346462 chr19:48346462 . . 0 21 hPsi_associated_SNPs_106132 3 0 0 0 0 Nucleus 0 0.438718592995102 0.537952899932862 0 hPsi_site_5092 iPseU_CNN:0.537952899932862;iRNA_PseU:0 5093 chr8 68992704 68992704 1 + G A SKCM 68992704 - 68992684 68992724 41 AAAACGGAAAAGTAGGGGTTCATCTTTGAATTCGCTTTTTT AAAACGGAAAAGTAGGGGTTTATCTTTGAATTCGCTTTTTT Direct Gain 0 0.950909078211003 0 0.367823004722595 prediction 0.901818156422007 Functional Gain - PREX2 ENSG00000046889 CDS Human protein_coding chr8:68992704 chr8:68992704 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106133 0 0 0 0 0 Nucleus 0 0.438718592994422 0 0 hPsi_site_5093 iPseU_CNN:0;iRNA_PseU:0 5094 chr3 169540634 169540634 1 + G T LUSC 169540634 + 169540614 169540654 41 TGGTCAACTTGCGCTTCCTGGACCTAAGCCAGAACCATCTG TGGTCAACTTGCGCTTCCTGTACCTAAGCCAGAACCATCTG Direct Gain 0 0.950903917099789 0 0.999999940395355 prediction 0.901807834199579 Functional Gain - LRRIQ4 ENSG00000188306 CDS Human protein_coding chr3:169540634 chr3:169540634 nonsynonymous SNV 0.886 3 21 hPsi_associated_SNPs_106134 0 0 0 0 1 exosome 0 0.438740147715427 0.99999988079071 0 hPsi_site_5094 iPseU_CNN:0.99999988079071;iRNA_PseU:0 5095 chr21 38538117 38538117 1 + G A UCEC 38538117 - 38538097 38538137 41 CAGTTGTAGTTTAACTCGTACATACTCCCCTGCTTTTGAAA CAGTTGTAGTTTAACTCGTATATACTCCCCTGCTTTTGAAA Direct Gain 0 0.950903199841581 0 0.999838769435883 prediction 0.901806399683162 Functional Gain - TTC3 ENSG00000182670 CDS Human protein_coding chr21:38538117 chr21:38538117 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_106135 0 0 0 0 0 Cytosol 0 0.438640324044103 0.999677538871766 0 hPsi_site_5095 iPseU_CNN:0.999677538871766;iRNA_PseU:0 5096 chr4 187004339 187004339 1 + C T BLCA 187004339 + 187004319 187004359 41 AAATGTGGATAGCTCTCCTTCACCATTCCAGCCTCTTCGTA AAATGTGGATAGCTCTCCTTTACCATTCCAGCCTCTTCGTA Direct Gain 0 0.950898050831346 0 0.997485280036926 prediction 0.901796101662692 Functional Gain - TLR3 ENSG00000164342 CDS Human protein_coding chr4:187004339 chr4:187004339 nonsynonymous SNV 0.248 4 21 hPsi_associated_SNPs_106136 0 0 0 0 0 exosome 0 0.438718593002745 0.994970560073852 0 hPsi_site_5096 iPseU_CNN:0.994970560073852;iRNA_PseU:0 5097 chr4 139966239 139966239 1 + G A LUSC 139966239 - 139966219 139966259 41 TTGCAGGTTCTGAAGGAGGTCACAGCCTTGAGCTGATCGAA TTGCAGGTTCTGAAGGAGGTTACAGCCTTGAGCTGATCGAA Direct Gain 0 0.950895252001371 0 0.998704552650452 prediction 0.901790504002743 Functional Gain - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966239 chr4:139966239 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_106137 0 0 1 0 0 chromatin 0 0.439609786935032 0.997409105300904 0 hPsi_site_5097 iPseU_CNN:0.997409105300904;iRNA_PseU:0 5098 chr9 101832019 101832019 1 + G A SKCM 101832019 - 101831999 101832039 41 GTCCGCGGTTCGCCATGCTTCACAGTAGTTATCCACAAGGC GTCCGCGGTTCGCCATGCTTTACAGTAGTTATCCACAAGGC Direct Gain 0 0.950889777785557 0 0.997937738895416 prediction 0.901779555571115 Functional Gain - COL15A1 ENSG00000204291 CDS Human protein_coding chr9:101832019 chr9:101832019 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106138 0 0 0 0 0 Endoplasmic reticulum 0 0.438717790463563 0.995875477790832 0 hPsi_site_5098 iPseU_CNN:0.995875477790832;iRNA_PseU:0 5099 chr1 156100427 156100427 1 + G A STAD 156100427 - 156100407 156100447 41 AGCCTGAGCAGCTATCAGGTCACCCTCCTTCTTGGTATTGC AGCCTGAGCAGCTATCAGGTTACCCTCCTTCTTGGTATTGC Direct Gain 0 0.950889389486573 0 0.999606311321259 prediction 0.901778778973147 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156100427 chr1:156100427 nonsynonymous SNV 0.644 4 21 hPsi_associated_SNPs_106139 0 0 0 0 0 Cytosol 0 0.438718599754216 0.999212622642518 0 hPsi_site_5099 iPseU_CNN:0.999212622642518;iRNA_PseU:0 5100 chr14 94712813 94712813 1 + C T SKCM 94712813 + 94712793 94712833 41 TATGCCTGCCTGCCACATGTCATATCAAGCGATCAGATTTA TATGCCTGCCTGCCACATGTTATATCAAGCGATCAGATTTA Direct Gain 0 0.950888757790474 0 0.999875783920288 prediction 0.901777515580947 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94712813 chr14:94712813 synonymous SNV . 0 21 hPsi_associated_SNPs_106140 0 0 1 0 1 cytosol 0 0.439974844330733 0.999751567840576 0 hPsi_site_5100 iPseU_CNN:0.999751567840576;iRNA_PseU:0 5101 chr19 51983636 51983636 1 + C T SKCM 51983636 + 51983616 51983656 41 GCCTCTGGCCAAATCTTCATCACCCAAACCCTGGGGATCAA GCCTCTGGCCAAATCTTCATTACCCAAACCCTGGGGATCAA Direct Gain 0 0.950884067307584 0 0.999930858612061 prediction 0.901768134615168 Functional Gain - CEACAM18 ENSG00000213822 CDS Human protein_coding chr19:51983636 chr19:51983636 synonymous SNV . 0 21 hPsi_associated_SNPs_106141 0 0 0 0 1 unknown 0 0.438718592878589 0.999861717224122 0 hPsi_site_5101 iPseU_CNN:0.999861717224122;iRNA_PseU:0 5102 chr12 95676223 95676223 1 + G A CESC 95676223 - 95676203 95676243 41 GCATGAGGTAGACCTTGAGTCACATCAGATAAGATACGATG GCATGAGGTAGACCTTGAGTTACATCAGATAAGATACGATG Direct Gain 0 0.950882342871885 0 0.999482870101929 prediction 0.90176468574377 Functional Gain - VEZT ENSG00000028203 CDS Human protein_coding chr12:95676223 chr12:95676223 synonymous SNV . 0 21 hPsi_associated_SNPs_106142 0 0 0 0 0 Endoplasmic reticulum 0 0.439348498185044 0.998965740203858 0 hPsi_site_5102 iPseU_CNN:0.998965740203858;iRNA_PseU:0 5103 chr1 15635201 15635201 1 + G A UCEC 15635201 - 15635181 15635221 41 GCGTTGTCTCTCTTTAAGTTCTCGCCCTCATTCTTCAGGGA GCGTTGTCTCTCTTTAAGTTTTCGCCCTCATTCTTCAGGGA Direct Gain 0 0.95088212055519 0 0.431660503149033 prediction 0.901764241110379 Functional Gain - FHAD1 ENSG00000142621 CDS Human protein_coding chr1:15635201 chr1:15635201 synonymous SNV . 0 21 hPsi_associated_SNPs_106143 0 0 0 0 0 cytosol 0 0.438601106756829 0 0 hPsi_site_5103 iPseU_CNN:0;iRNA_PseU:0 5104 chr10 104129937 104129937 1 + G A STAD 104129937 - 104129917 104129957 41 TGTGATCATTTTTTCTGGGTCACATTGCTAGAGAGGGCAAA TGTGATCATTTTTTCTGGGTTACATTGCTAGAGAGGGCAAA Direct Gain 0 0.95087087107098 0 0.542281687259674 prediction 0.90174174214196 Functional Gain - GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129937 chr10:104129937 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106144 0 0 0 0 0 Nucleus 0 0.438718118032128 0.0845633745193479 0 hPsi_site_5104 iPseU_CNN:0.0845633745193479;iRNA_PseU:0 5105 chr6 121768083 121768083 1 + C T SKCM 121768083 + 121768063 121768103 41 GTGTGGCTGTCAGTACTTTTCATTTTCCGAATCCTGCTGCT GTGTGGCTGTCAGTACTTTTTATTTTCCGAATCCTGCTGCT Direct Gain 0 0.9508682263507 0 0.922200322151184 prediction 0.901736452701401 Functional Gain - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121768083 chr6:121768083 synonymous SNV . 0 21 hPsi_associated_SNPs_106145 0 0 1 0 0 Endoplasmic reticulum 0 0.438726334832657 0.844400644302368 0 hPsi_site_5105 iPseU_CNN:0.844400644302368;iRNA_PseU:0 5106 chr7 63538469 63538469 1 + G A STAD 63538469 - 63538449 63538489 41 GGTTGAGGAGTAGGTAAAGGCTTTGCCACATTCTTCACAAA GGTTGAGGAGTAGGTAAAGGTTTTGCCACATTCTTCACAAA Direct Gain 0 0.950855786178394 0 0.787073135375977 prediction 0.901711572356788 Functional Gain - ZNF727 ENSG00000257482 CDS Human other chr7:63538469 chr7:63538469 nonsynonymous SNV 0.524 1 21 hPsi_associated_SNPs_106146 0 0 0 0 0 exosome 0 0.438718592995102 0.574146270751954 0 hPsi_site_5106 iPseU_CNN:0.574146270751954;iRNA_PseU:0 5107 chr6 102337571 102337571 1 + C A UCEC 102337571 - 102337551 102337591 41 ATAAAGGGCTTGGAAAAGTCGATGACCTTCTCTCGAACATA ATAAAGGGCTTGGAAAAGTCTATGACCTTCTCTCGAACATA Direct Gain 0 0.950851825858959 0 0.987215340137482 prediction 0.901703651717919 Functional Gain - GRIK2 ENSG00000164418 CDS Human protein_coding chr6:102337571 chr6:102337571 synonymous SNV . 0 21 hPsi_associated_SNPs_106147 0 0 0 0 0 exosome 0 0.438718592827999 0.974430680274964 0 hPsi_site_5107 iPseU_CNN:0.974430680274964;iRNA_PseU:0 5108 chr21 45821651 45821651 1 + C A LUAD 45821651 - 45821631 45821671 41 AGGAAGGCGAAGTAGGAGAGGATGTTCAGGTGGAAGACCAC AGGAAGGCGAAGTAGGAGAGTATGTTCAGGTGGAAGACCAC Direct Gain 0 0.950843210821337 0 0.974457323551178 prediction 0.901686421642675 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45821651 chr21:45821651 synonymous SNV . 0 21 hPsi_associated_SNPs_106148 0 0 0 0 0 Ribosome 0 0.43871859045536 0.948914647102356 0 hPsi_site_5108 iPseU_CNN:0.948914647102356;iRNA_PseU:0 5109 chr3 172480757 172480757 1 + G A BLCA 172480757 - 172480737 172480777 41 GGGTTAAAAGCATACCTTTTCATATAAATACATAGTTTCTC GGGTTAAAAGCATACCTTTTTATATAAATACATAGTTTCTC Direct Gain 0 0.950839853387914 0 0.980243921279907 prediction 0.901679706775827 Functional Gain - ECT2 ENSG00000114346 CDS Human protein_coding chr3:172480757 chr3:172480757 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106149 0 0 0 0 0 Nucleus 0 0.438037272293135 0.960487842559814 0 hPsi_site_5109 iPseU_CNN:0.960487842559814;iRNA_PseU:0 5110 chr18 54349956 54349956 1 + G A STAD 54349956 - 54349936 54349976 41 TTTCAGGGTAATGTCCGTGGCATAAAAGCCTTCCTTCTCGC TTTCAGGGTAATGTCCGTGGTATAAAAGCCTTCCTTCTCGC Direct Gain 0 0.95083885784824 0 0.990691542625427 prediction 0.901677715696479 Functional Gain - WDR7 ENSG00000091157 CDS Human protein_coding chr18:54349956 chr18:54349956 nonsynonymous SNV 0.971 4 21 hPsi_associated_SNPs_106150 0 0 0 0 0 chromatin 0 0.438718855438624 0.981383085250854 0 hPsi_site_5110 iPseU_CNN:0.981383085250854;iRNA_PseU:0 5111 chr1 39926431 39926431 1 + C A STAD 39926431 - 39926411 39926451 41 CATCGATAAACTCCTGACGTGTTATCTTCCCATCCTGGTCC CATCGATAAACTCCTGACGTTTTATCTTCCCATCCTGGTCC Direct Gain 0 0.950837720149519 0 0.998891234397888 prediction 0.901675440299038 Functional Gain - MACF1 ENSG00000127603 CDS Human protein_coding chr1:39926431 chr1:39926431 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106151 0 0 0 0 0 Endoplasmic reticulum 0 0.438666910980451 0.997782468795776 0 hPsi_site_5111 iPseU_CNN:0.997782468795776;iRNA_PseU:0 5112 chr7 86394595 86394595 1 + T A LUSC 86394595 - 86394575 86394615 41 TGCCTTTTTCGTTAATAGGAAACAGGCCCCCTAAAACAAGG TGCCTTTTTCGTTAATAGGATACAGGCCCCCTAAAACAAGG Direct Gain 0 0.950837577235421 0 0.999764680862427 prediction 0.901675154470841 Functional Gain - GRM3 ENSG00000198822 CDS Human protein_coding chr7:86394595 chr7:86394595 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106152 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593052731 0.999529361724854 0 hPsi_site_5112 iPseU_CNN:0.999529361724854;iRNA_PseU:0 5113 chr14 24886215 24886215 1 + G T LUSC 24886215 + 24886195 24886235 41 CCTTCAGGGCCTCCTCCACTGATGCCACACCGTTCAAGGTC CCTTCAGGGCCTCCTCCACTTATGCCACACCGTTCAAGGTC Direct Gain 0 0.950835027918301 0 0.996204853057861 prediction 0.901670055836603 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24886215 chr14:24886215 nonsynonymous SNV 0.004 1 21 hPsi_associated_SNPs_106153 0 0 1 0 0 Exosome 0 0.438718549930291 0.992409706115722 0 hPsi_site_5113 iPseU_CNN:0.992409706115722;iRNA_PseU:0 5114 chrX 1531808 1531808 1 + C T rs184571688 1531808 + 1531788 1531828 41 AAGAAGCAGTCCTCCCCGGACAGATCCTGGGACGGCCACCC AAGAAGCAGTCCTCCCCGGATAGATCCTGGGACGGCCACCC Direct Gain 0 0.95083384908837 0 0.974923372268677 prediction 0.90166769817674 Functional Gain - ASMTL-AS1 ENSG00000236017 ncRNA_exonic Human antisense chrX:1531808 chrX:1531808 . . 0 21 hPsi_associated_SNPs_106154 0 0 0 0 0 unknown 0 0.439073415274019 0.949846744537354 0 hPsi_site_5114 iPseU_CNN:0.949846744537354;iRNA_PseU:0 5115 chr11 123894386 123894386 1 + T A UCEC 123894386 - 123894366 123894406 41 GGTGTGGATCCGCAGGATGGAACAGACGATGGACACATAAG GGTGTGGATCCGCAGGATGGTACAGACGATGGACACATAAG Direct Gain 0 0.950829137989326 0 0.999576926231384 prediction 0.901658275978652 Functional Gain - OR10G9 ENSG00000236981 CDS Human protein_coding chr11:123894386 chr11:123894386 nonsynonymous SNV 0.005 1 21 hPsi_associated_SNPs_106155 0 0 0 0 0 unknown 0 0.448718849704234 0.999153852462768 0 hPsi_site_5115 iPseU_CNN:0.999153852462768;iRNA_PseU:0 5116 chr7 158818124 158818124 1 + G A rs552692712 158818124 - 158818104 158818144 41 CAGTCTGCACTGTGTCTCCTCATCTATCCATCATCCGGATG CAGTCTGCACTGTGTCTCCTTATCTATCCATCATCCGGATG Direct Gain 0 0.950828094462876 0 0.997561633586884 prediction 0.901656188925753 Functional Gain - LINC00689 ENSG00000231419 ncRNA_exonic Human processed_transcript chr7:158818124 chr7:158818124 . . 0 21 hPsi_associated_SNPs_106156 0 0 0 0 0 unknown 0 0.438424497751324 0.995123267173768 0 hPsi_site_5116 iPseU_CNN:0.995123267173768;iRNA_PseU:0 5117 chr22 32439307 32439307 1 + C T LUSC 32439307 + 32439287 32439327 41 AGCCCCAAGACCACCGCGGTCACCCGGCCTGTTGAGACCCA AGCCCCAAGACCACCGCGGTTACCCGGCCTGTTGAGACCCA Direct Gain 0 0.950826846087007 0 0.894143044948578 prediction 0.901653692174013 Functional Gain - SLC5A1 ENSG00000100170 CDS Human protein_coding chr22:32439307 chr22:32439307 synonymous SNV . 0 21 hPsi_associated_SNPs_106157 0 0 0 0 1 Nucleus 0 0.438718951593531 0.788286089897156 0 hPsi_site_5117 iPseU_CNN:0.788286089897156;iRNA_PseU:0 5118 chr4 106156732 106156732 1 + G A UCEC 106156732 - 106156712 106156752 41 ATCTCGTGTTTGCTCCTTGTCTCGACCCTTCAGAATCTCTT ATCTCGTGTTTGCTCCTTGTTTCGACCCTTCAGAATCTCTT Direct Gain 0 0.950822748634781 0 0.998648524284363 prediction 0.901645497269562 Functional Gain - TET2 ENSG00000168769 CDS Human protein_coding chr4:106156732 chr4:106156732 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106158 0 0 0 0 0 Cytosol 0 0.438778529497272 0.997297048568726 0 hPsi_site_5118 iPseU_CNN:0.997297048568726;iRNA_PseU:0 5119 chr15 86807816 86807816 1 + G A KICH 86807816 - 86807796 86807836 41 CATCCTTGGGCAGAAAATTGCATCTACGTCCCAGGCATCTG CATCCTTGGGCAGAAAATTGTATCTACGTCCCAGGCATCTG Direct Gain 0 0.950822324154261 0 0.9996178150177 prediction 0.901644648308522 Functional Gain - AGBL1 ENSG00000166748 CDS Human other chr15:86807816 chr15:86807816 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106159 0 0 0 0 0 exosome 0 0.438685654026704 0.9992356300354 0 hPsi_site_5119 iPseU_CNN:0.9992356300354;iRNA_PseU:0 5120 chr17 3392596 3392596 1 + G A LUSC 3392596 - 3392576 3392616 41 AAATCAAGAGCATGTTTAATCATTTTTCTCATTTGATCCAA AAATCAAGAGCATGTTTAATTATTTTTCTCATTTGATCCAA Direct Gain 0 0.950819257358604 0 0.441324591636658 prediction 0.901638514717207 Functional Gain - ASPA ENSG00000108381 CDS Human protein_coding chr17:3392596 chr17:3392596 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106160 0 0 0 0 0 exosome 0 0.438718601310577 0 0 hPsi_site_5120 iPseU_CNN:0;iRNA_PseU:0 5121 chr19 36279258 36279258 1 + C T SKCM 36279258 + 36279238 36279278 41 AGGGCAAAGAGGGGAGGGGGCTGGTCCCCCACCCCCTTACC AGGGCAAAGAGGGGAGGGGGTTGGTCCCCCACCCCCTTACC Direct Gain 0 0.95080822761337 0 0.736028075218201 prediction 0.90161645522674 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36279258 chr19:36279258 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106161 0 0 1 0 0 chromatin 0 0.438718592995102 0.472056150436402 0 hPsi_site_5121 iPseU_CNN:0.472056150436402;iRNA_PseU:0 5122 chr16 7762285 7762285 1 + C T rs552095997 7762285 + 7762265 7762305 41 GCTGCCATAGGTTAAGTCCTCATGTGTACAGTGCAGGCCCT GCTGCCATAGGTTAAGTCCTTATGTGTACAGTGCAGGCCCT Direct Gain 0 0.950807738799167 0 0.902946352958679 prediction 0.901615477598333 Functional Gain - RBFOX1 ENSG00000078328 UTR3 Human protein_coding chr16:7762285 chr16:7762285 . . 0 21 hPsi_associated_SNPs_106162 0 0 0 0 0 Cytoplasm 0 0.438700268078066 0.805892705917358 0 hPsi_site_5122 iPseU_CNN:0.805892705917358;iRNA_PseU:0 5123 chr8 94935887 94935887 1 + C A OV 94935887 - 94935867 94935907 41 CACTCACTATTCTTGGTTTTGATACGCCCCTACAACATGAG CACTCACTATTCTTGGTTTTTATACGCCCCTACAACATGAG Direct Gain 0 0.950800291481692 0 0.858152151107788 prediction 0.901600582963384 Functional Gain - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935887 chr8:94935887 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_106163 0 0 0 0 0 Ribosome 0 0.438718302534931 0.716304302215576 0 hPsi_site_5123 iPseU_CNN:0.716304302215576;iRNA_PseU:0 5124 chr12 132546845 132546845 1 + C T SKCM 132546845 + 132546825 132546865 41 AGTGCAGACCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCC AGTGCAGACCCCGGCACGGTTTTTGGTGCCCCAAGTGTCCC Direct Gain 0 0.950794690756162 0 0.44060292840004 prediction 0.901589381512324 Functional Gain - EP400 ENSG00000183495 CDS Human protein_coding chr12:132546845 chr12:132546845 nonsynonymous SNV 0.614 5 21 hPsi_associated_SNPs_106164 0 0 1 0 1 Cytosol 0 0.439046205569808 0 0 hPsi_site_5124 iPseU_CNN:0;iRNA_PseU:0 5125 chr5 140176856 140176856 1 + C T SKCM 140176856 + 140176836 140176876 41 GACCCCCCCAAGACGGACCTCATGGCCTTCAGCCCTAGCTT GACCCCCCCAAGACGGACCTTATGGCCTTCAGCCCTAGCTT Direct Gain 0 0.950793123635885 0 0.93078875541687 prediction 0.901586247271771 Functional Gain - PCDHA2 ENSG00000204969 CDS Human protein_coding chr5:140176856 chr5:140176856 synonymous SNV . 0 21 hPsi_associated_SNPs_106165 0 0 0 0 1 insoluble cytoplasm 0 0.438718592995102 0.86157751083374 0 hPsi_site_5125 iPseU_CNN:0.86157751083374;iRNA_PseU:0 5126 chr16 55690054 55690054 1 + C T rs57556520 55690054 + 55690034 55690074 41 GGGGCCGGCAGGGCGCAAGGCACCAGGGATCCCCTCGCCGC GGGGCCGGCAGGGCGCAAGGTACCAGGGATCCCCTCGCCGC Direct Gain 0 0.950792785443166 0 0.999999046325684 prediction 0.901585570886331 Functional Gain - SLC6A2 ENSG00000103546 UTR5 Human protein_coding chr16:55690054 chr16:55690054 . . 0 21 hPsi_associated_SNPs_106166 0 0 0 0 1 exosome 0 0.438716908992828 0.999998092651368 0 hPsi_site_5126 iPseU_CNN:0.999998092651368;iRNA_PseU:0 5127 chr1 156626843 156626843 1 + C T COAD 156626843 + 156626823 156626863 41 AGTGCCGGATGTACGGCGCGCATCTGGCCAGCATCAGCACA AGTGCCGGATGTACGGCGCGTATCTGGCCAGCATCAGCACA Direct Gain 0 0.950789134473891 0 0.999916195869446 prediction 0.901578268947783 Functional Gain - BCAN ENSG00000132692 CDS Human protein_coding chr1:156626843 chr1:156626843 nonsynonymous SNV 0.925 4 21 hPsi_associated_SNPs_106167 0 0 0 0 1 chromatin 0 0.438718049878344 0.999832391738892 0 hPsi_site_5127 iPseU_CNN:0.999832391738892;iRNA_PseU:0 5128 chr1 145438826 145438826 1 + G A rs140925524 145438826 - 145438806 145438846 41 TTAAAGACCACCTCAAAAGACTTGATCTTCTTGAACATCAC TTAAAGACCACCTCAAAAGATTTGATCTTCTTGAACATCAC Direct Gain 0 0.950788268979818 0 0.999987721443176 prediction 0.901576537959636 Functional Gain - TXNIP ENSG00000117289 CDS Human other chr1:145438826 chr1:145438826 synonymous SNV . 0 21 hPsi_associated_SNPs_106168 0 0 0 0 0 Ribosome 0 0.438718646939615 0.999975442886352 0 hPsi_site_5128 iPseU_CNN:0.999975442886352;iRNA_PseU:0 5129 chr16 84872125 84872125 1 + C A BLCA 84872125 - 84872105 84872145 41 AACAGCAGCCCCAAGGGGATGACACCACCCAGGACGCAGCT AACAGCAGCCCCAAGGGGATTACACCACCCAGGACGCAGCT Direct Gain 0 0.950781890303158 0 0.509422659873962 prediction 0.901563780606315 Functional Gain - CRISPLD2 ENSG00000103196 CDS Human protein_coding chr16:84872125 chr16:84872125 synonymous SNV . 0 21 hPsi_associated_SNPs_106169 0 0 0 0 0 Nucleus 0 0.43870592159508 0.0188453197479239 0 hPsi_site_5129 iPseU_CNN:0.0188453197479239;iRNA_PseU:0 5130 chr15 91843019 91843019 1 + C T rs181009103 91843019 + 91842999 91843039 41 CGAGTAGCTGGGATTACAGGCATGCGCCACCATGCCTGGCT CGAGTAGCTGGGATTACAGGTATGCGCCACCATGCCTGGCT Direct Gain 0 0.950777154744197 0 0.997271180152893 prediction 0.901554309488395 Functional Gain - SV2B ENSG00000185518 UTR3 Human protein_coding chr15:91843019 chr15:91843019 . . 0 21 hPsi_associated_SNPs_106170 0 0 0 0 0 Cytosol 0 0.438718592994802 0.994542360305786 0 hPsi_site_5130 iPseU_CNN:0.994542360305786;iRNA_PseU:0 5131 chr4 71508611 71508611 1 + C A LUSC 71508611 - 71508591 71508631 41 GTAATAGGAGTTTTCATGTTGATCAACAGAATTAAAATTTG GTAATAGGAGTTTTCATGTTTATCAACAGAATTAAAATTTG Direct Gain 0 0.950777108974696 0 0.00695842504501343 prediction 0.901554217949393 Functional Gain - ENAM ENSG00000132464 CDS Human protein_coding chr4:71508611 chr4:71508611 nonsynonymous SNV 0.983 2 21 hPsi_associated_SNPs_106171 0 0 0 0 0 exosome 0 0.43762634946968 0 0 hPsi_site_5131 iPseU_CNN:0;iRNA_PseU:0 5132 chr17 66033315 66033315 1 + G A COAD 66033315 - 66033295 66033335 41 GAAGGTACTCACTGTACTGTCTTTTCCCTTGTTCTTGAATC GAAGGTACTCACTGTACTGTTTTTTCCCTTGTTCTTGAATC Direct Gain 0 0.950771754786783 0 0.406591832637787 prediction 0.901543509573566 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033315 chr17:66033315 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_106172 0 0 0 0 0 Cytosol 0 0.438699214960132 0 0 hPsi_site_5132 iPseU_CNN:0;iRNA_PseU:0 5133 chr11 66329012 66329012 1 + C A LUAD 66329012 - 66328992 66329032 41 TCAATGTTAGTCTTGTAGTTGATAATGTTCTGCTCCTGCTG TCAATGTTAGTCTTGTAGTTTATAATGTTCTGCTCCTGCTG Direct Gain 0 0.950771131516663 0 0.165806323289871 prediction 0.901542263033327 Functional Gain - ACTN3 ENSG00000248746 CDS Human protein_coding chr11:66329012 chr11:66329012 unknown . 0 21 hPsi_associated_SNPs_106173 0 0 0 0 0 Cytosol 0 0.438818439869805 0 0 hPsi_site_5133 iPseU_CNN:0;iRNA_PseU:0 5134 chr21 22658708 22658708 1 + G A BLCA 22658708 - 22658688 22658728 41 GGAAATAGTGGTGACTTCCTCATTATGATACAACCAGCTGA GGAAATAGTGGTGACTTCCTTATTATGATACAACCAGCTGA Direct Gain 0 0.950769144814333 0 0.962802410125732 prediction 0.901538289628667 Functional Gain - NCAM2 ENSG00000154654 CDS Human protein_coding chr21:22658708 chr21:22658708 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_106174 0 0 0 0 0 Cytosol 0 0.438718593008611 0.925604820251464 0 hPsi_site_5134 iPseU_CNN:0.925604820251464;iRNA_PseU:0 5135 chr10 119013854 119013854 1 + C A rs547856858 119013854 - 119013834 119013874 41 ACAGCAAAAGAATAATGCGTGACTCGCCTTCCCTCTCCAGC ACAGCAAAAGAATAATGCGTTACTCGCCTTCCCTCTCCAGC Direct Gain 0 0.950765619059982 0 0.998622715473175 prediction 0.901531238119964 Functional Gain - SLC18A2 ENSG00000165646 intronic Human protein_coding chr10:119013854 chr10:119013854 . . 0 21 hPsi_associated_SNPs_106175 0 0 0 0 0 nucleus 0 0.438638354878356 0.99724543094635 0 hPsi_site_5135 iPseU_CNN:0.99724543094635;iRNA_PseU:0 5136 chr8 142161747 142161747 1 + G T LUAD 142161747 + 142161727 142161767 41 TGCATCCTGACGGAACAGCGGATCGTCTTCTTCTCCTCGGA TGCATCCTGACGGAACAGCGTATCGTCTTCTTCTCCTCGGA Direct Gain 0 0.950756447422778 0 0.999829769134521 prediction 0.901512894845557 Functional Gain - DENND3 ENSG00000105339 CDS Human protein_coding chr8:142161747 chr8:142161747 synonymous SNV . 0 21 hPsi_associated_SNPs_106176 0 0 0 0 1 Nucleus 0 0.43646680451446 0.999659538269042 0 hPsi_site_5136 iPseU_CNN:0.999659538269042;iRNA_PseU:0 5137 chr12 101776996 101776996 1 + G A rs1061436 101776996 - 101776976 101777016 41 CGTGGCCGGCCTGCCGAGCTCTTCCTTCACCTCTTCCTTCT CGTGGCCGGCCTGCCGAGCTTTTCCTTCACCTCTTCCTTCT Direct Gain 0 0.950750748860271 0 0.999877452850342 prediction 0.901501497720542 Functional Gain - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101776996 chr12:101776996 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_106177 0 0 0 0 0 Cytosol 0 0.438718593010798 0.999754905700684 0 hPsi_site_5137 iPseU_CNN:0.999754905700684;iRNA_PseU:0 5138 chrX 79279565 79279565 1 + G T STAD 79279565 + 79279545 79279585 41 TATTTTCTTTCTTACAGGCGGATGTTCCCCTCTGTTCGGGT TATTTTCTTTCTTACAGGCGTATGTTCCCCTCTGTTCGGGT Direct Gain 0 0.950741778164536 0 0.0858862102031708 prediction 0.901483556329072 Functional Gain - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79279565 chrX:79279565 synonymous SNV . 0 21 hPsi_associated_SNPs_106178 0 0 0 0 2 unknown 0 0.438718592995107 0 0 hPsi_site_5138 iPseU_CNN:0;iRNA_PseU:0 5139 chr15 102507705 102507705 1 + C T UCEC 102507705 + 102507685 102507725 41 TTTGCAGCCTCCTCTTCTGTCACCAACTGGGAACCCACCTC TTTGCAGCCTCCTCTTCTGTTACCAACTGGGAACCCACCTC Direct Gain 0 0.950738672501606 0 0.993420362472534 prediction 0.901477345003212 Functional Gain - WASH3P ENSG00000185596 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr15:102507705 chr15:102507705 . . 0 21 hPsi_associated_SNPs_106179 0 0 1 1 1 unknown 0 0.43874458702715 0.986840724945068 0 hPsi_site_5139 iPseU_CNN:0.986840724945068;iRNA_PseU:0 5140 chr13 24200904 24200904 1 + G T COAD 24200904 + 24200884 24200924 41 TGGAGTGTGTGCCTTGTGGAGACCCTCCTCCTCCTTACGAA TGGAGTGTGTGCCTTGTGGATACCCTCCTCCTCCTTACGAA Direct Gain 0 0.950735479525153 0 0.998377680778503 prediction 0.901470959050306 Functional Gain - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24200904 chr13:24200904 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_106180 0 0 1 0 2 cytosol 0 0.438745255267313 0.996755361557006 0 hPsi_site_5140 iPseU_CNN:0.996755361557006;iRNA_PseU:0 5141 chr19 58806921 58806921 1 + G A rs188839301 58806921 - 58806901 58806941 41 TTTTACTTGTGGTTAAAAGTCATCAGCAAAGTTTCTCTCCT TTTTACTTGTGGTTAAAAGTTATCAGCAAAGTTTCTCTCCT Direct Gain 0 0.950728308676133 0 0.468421638011932 prediction 0.901456617352265 Functional Gain - ZNF8-ERVK3-1 ENSG00000083842;ENSG00000267216;ENSG00000273439 UTR3 Human other chr19:58806921 chr19:58806921 . . 0 21 hPsi_associated_SNPs_106181 0 0 0 0 0 unknown 0 0.438718717799032 0 0 hPsi_site_5141 iPseU_CNN:0;iRNA_PseU:0 5142 chr9 99697617 99697617 1 + C T SKCM 99697617 + 99697597 99697637 41 CACTGGTTTACAGCCCAGTTCTCCGATCCCTGGCCCGGCGG CACTGGTTTACAGCCCAGTTTTCCGATCCCTGGCCCGGCGG Direct Gain 0 0.950721803798436 0 0.991854667663574 prediction 0.901443607596872 Functional Gain - NUTM2G ENSG00000188152 CDS Human protein_coding chr9:99697617 chr9:99697617 nonsynonymous SNV 0.010 3 21 hPsi_associated_SNPs_106182 0 0 0 0 1 chromatin 0 0.438718592995102 0.983709335327148 0 hPsi_site_5142 iPseU_CNN:0.983709335327148;iRNA_PseU:0 5143 chr3 121642073 121642073 1 + C T SKCM 121642073 + 121642053 121642093 41 GATCTGTTTGCCCTAGGGTTCACGATGGACTTTGCAAGCCA GATCTGTTTGCCCTAGGGTTTACGATGGACTTTGCAAGCCA Direct Gain 0 0.950720428962334 0 0.601681232452393 prediction 0.901440857924668 Functional Gain - SLC15A2 ENSG00000163406 CDS Human protein_coding chr3:121642073 chr3:121642073 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_106183 0 0 0 0 1 cytosol 0 0.43572240209492 0.203362464904786 0 hPsi_site_5143 iPseU_CNN:0.203362464904786;iRNA_PseU:0 5144 chr12 99093210 99093210 1 + G A rs138526583 99093210 - 99093190 99093230 41 CACATTAATGCTTTTCCTCTCATTTGCTGATGTCGCATCCC CACATTAATGCTTTTCCTCTTATTTGCTGATGTCGCATCCC Direct Gain 0 0.950719881940428 0 0.334056317806244 prediction 0.901439763880856 Functional Gain - APAF1 ENSG00000120868 CDS Human protein_coding chr12:99093210 chr12:99093210 nonsynonymous SNV 0.986 2 21 hPsi_associated_SNPs_106184 0 0 0 0 0 Nucleus 0 0.438718530288942 0 0 hPsi_site_5144 iPseU_CNN:0;iRNA_PseU:0 5145 chr14 102348558 102348558 1 + G A BLCA 102348558 - 102348538 102348578 41 TGGTTCATCTTCCTCCGGGTCAAATTCCGCTCCCGTAGGAT TGGTTCATCTTCCTCCGGGTTAAATTCCGCTCCCGTAGGAT Direct Gain 0 0.95071968703068 0 0.999998271465302 prediction 0.90143937406136 Functional Gain - PPP2R5C ENSG00000078304 CDS Human protein_coding chr14:102348558 chr14:102348558 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_106185 0 0 0 0 0 Cytosol 0 0.438718617694037 0.999996542930604 0 hPsi_site_5145 iPseU_CNN:0.999996542930604;iRNA_PseU:0 5146 chr4 152203456 152203456 1 + C T CESC 152203456 + 152203436 152203476 41 TTGAAACTGTCCTCTCAAGTCACCTTCACTTCTGCCATCCT TTGAAACTGTCCTCTCAAGTTACCTTCACTTCTGCCATCCT Direct Gain 0 0.9507137480158 0 0.998432397842407 prediction 0.9014274960316 Functional Gain - PRSS48 ENSG00000189099 CDS Human protein_coding chr4:152203456 chr4:152203456 synonymous SNV . 0 21 hPsi_associated_SNPs_106186 0 0 0 0 0 nucleus 0 0.438718592319163 0.996864795684814 0 hPsi_site_5146 iPseU_CNN:0.996864795684814;iRNA_PseU:0 5147 chr4 6995917 6995917 1 + G A LUSC 6995917 - 6995897 6995937 41 AGGTCTTCCAGCCTTGTCTTCATATTCCTAGGACAAAGAAA AGGTCTTCCAGCCTTGTCTTTATATTCCTAGGACAAAGAAA Direct Gain 0 0.95071215293982 0 0.993390560150146 prediction 0.90142430587964 Functional Gain - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6995917 chr4:6995917 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106187 0 0 0 0 0 Cytosol 0 0.439523446314732 0.986781120300292 0 hPsi_site_5147 iPseU_CNN:0.986781120300292;iRNA_PseU:0 5148 chr9 96054642 96054642 1 + G A LGG 96054642 - 96054622 96054662 41 ACCACATGGGAGTCTGAGGCCACCTGCCTTCCATCTCTGTC ACCACATGGGAGTCTGAGGCTACCTGCCTTCCATCTCTGTC Direct Gain 0 0.950699428358056 0 0.999920010566711 prediction 0.901398856716112 Functional Gain - WNK2 ENSG00000165238 CDS Human protein_coding chr9:96054642 chr9:96054642 synonymous SNV . 0 21 hPsi_associated_SNPs_106188 0 0 0 0 0 Nucleus 0 0.438687600993733 0.999840021133422 0 hPsi_site_5148 iPseU_CNN:0.999840021133422;iRNA_PseU:0 5149 chr11 67052920 67052920 1 + G A rs2229537 67052920 - 67052900 67052940 41 TAAAAGGCGGGTGGGCGGGTCAGAGGCCGTTGGCACTGCCG TAAAAGGCGGGTGGGCGGGTTAGAGGCCGTTGGCACTGCCG Direct Gain 0 0.950696235655213 0 0.998674273490906 prediction 0.901392471310425 Functional Gain - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052920 chr11:67052920 synonymous SNV . 0 21 hPsi_associated_SNPs_106189 0 0 0 0 0 chromatin 0 0.438718592995029 0.997348546981812 0 hPsi_site_5149 iPseU_CNN:0.997348546981812;iRNA_PseU:0 5150 chr2 73777445 73777445 1 + G A ESCA 73777445 - 73777425 73777465 41 TGGCTGAGAGGTCATCATCTCTTGTGCCTAGCACCTGAGCT TGGCTGAGAGGTCATCATCTTTTGTGCCTAGCACCTGAGCT Direct Gain 0 0.950691817774112 0 0.996318459510803 prediction 0.901383635548224 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73777445 chr2:73777445 nonsynonymous SNV 0.492 3 21 hPsi_associated_SNPs_106190 0 0 0 0 0 Nucleus 0 0.438106581202758 0.992636919021606 0 hPsi_site_5150 iPseU_CNN:0.992636919021606;iRNA_PseU:0 5151 chr1 201839746 201839746 1 + G A LUSC 201839746 - 201839726 201839766 41 TGGGCTACTTGTTCCAGGGTCACTGACACATAGGCCCGCAA TGGGCTACTTGTTCCAGGGTTACTGACACATAGGCCCGCAA Direct Gain 0 0.950690863128373 0 0.982061088085175 prediction 0.901381726256745 Functional Gain - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201839746 chr1:201839746 synonymous SNV . 0 21 hPsi_associated_SNPs_106191 0 0 0 0 0 Nucleus 0 0.438797262934089 0.96412217617035 0 hPsi_site_5151 iPseU_CNN:0.96412217617035;iRNA_PseU:0 5152 chr5 153765981 153765981 1 + C T COAD 153765981 + 153765961 153766001 41 GGAGGGGAGCAGTATGAAATCTCCTTCAAGGTGAGCCAGCT GGAGGGGAGCAGTATGAAATTTCCTTCAAGGTGAGCCAGCT Direct Gain 0 0.950690527145251 0 0.908952713012695 prediction 0.901381054290502 Functional Gain - GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153765981 chr5:153765981 synonymous SNV . 0 21 hPsi_associated_SNPs_106192 0 0 1 0 1 Ribosome 0 0.438718489535438 0.81790542602539 0 hPsi_site_5152 iPseU_CNN:0.81790542602539;iRNA_PseU:0 5153 chr16 1545455 1545455 1 + C T rs577762506 1545455 + 1545435 1545475 41 CGGCAGCAGACGCAGCCCGGCTTCATCCTGCTCCGGGAGAC CGGCAGCAGACGCAGCCCGGTTTCATCCTGCTCCGGGAGAC Direct Gain 0 0.950682727897775 0 0.841344594955444 prediction 0.90136545579555 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545455 chr16:1545455 synonymous SNV . 0 21 hPsi_associated_SNPs_106193 0 0 0 0 0 Cytosol 0 0.438717303203706 0.682689189910888 0 hPsi_site_5153 iPseU_CNN:0.682689189910888;iRNA_PseU:0 5154 chr11 1092965 1092965 1 + C A UCEC 1092965 - 1092945 1092985 41 GTGTGCCGGTGGGTGTTGGGGTTGGGGTCACCGTAGTGGTG GTGTGCCGGTGGGTGTTGGGTTTGGGGTCACCGTAGTGGTG Direct Gain 0 0.950681736213823 0 0.988381743431091 prediction 0.901363472427647 Functional Gain - MUC2 ENSG00000198788 CDS Human processed_transcript chr11:1092965 chr11:1092965 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106194 0 0 0 0 0 Endoplasmic reticulum 0 0.438718578380856 0.976763486862182 0 hPsi_site_5154 iPseU_CNN:0.976763486862182;iRNA_PseU:0 5155 chr16 89986444 89986444 1 + C T STAD 89986444 + 89986424 89986464 41 GCTGGGGCCCCTTCTTCCTGCATCTCACACTCATCGTCCTC GCTGGGGCCCCTTCTTCCTGTATCTCACACTCATCGTCCTC Direct Gain 0 0.950679295262442 0 0.960217893123627 prediction 0.901358590524883 Functional Gain - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89986444 chr16:89986444 nonsynonymous SNV 0.946 1 21 hPsi_associated_SNPs_106195 0 0 1 0 0 Endoplasmic reticulum 0 0.438718598803073 0.920435786247254 0 hPsi_site_5155 iPseU_CNN:0.920435786247254;iRNA_PseU:0 5156 chr9 137707811 137707811 1 + G T UCEC 137707811 + 137707791 137707831 41 GTCCCCCTGGTGACAAAGGAGATGATGGTGAACCCGGGCAG GTCCCCCTGGTGACAAAGGATATGATGGTGAACCCGGGCAG Direct Gain 0 0.950679229938135 0 0.097063422203064 prediction 0.901358459876271 Functional Gain - COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137707811 chr9:137707811 nonsynonymous SNV 0.965 3 21 hPsi_associated_SNPs_106196 0 0 1 0 1 Nucleus 0 0.438722257779559 0 0 hPsi_site_5156 iPseU_CNN:0;iRNA_PseU:0 5157 chr10 96454723 96454723 1 + G T UCEC 96454723 + 96454703 96454743 41 GGCTGTGCTCCCTGCAATGTGATCTGCTCTGTTATTTTCCA GGCTGTGCTCCCTGCAATGTTATCTGCTCTGTTATTTTCCA Direct Gain 0 0.950671859751685 0 0.900019526481628 prediction 0.90134371950337 Functional Gain - CYP2C18 ENSG00000108242 CDS Human protein_coding chr10:96454723 chr10:96454723 synonymous SNV . 0 21 hPsi_associated_SNPs_106197 0 0 0 0 1 exosome 0 0.438988271000669 0.800039052963256 0 hPsi_site_5157 iPseU_CNN:0.800039052963256;iRNA_PseU:0 5158 chr5 10391798 10391798 1 + G A BLCA 10391798 - 10391778 10391818 41 CGCATCCTCCACACCAGCGTCATCTTCCTCCTCATTGTCCT CGCATCCTCCACACCAGCGTTATCTTCCTCCTCATTGTCCT Direct Gain 0 0.950666741655498 0 0.995487213134766 prediction 0.901333483310996 Functional Gain - MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10391798 chr5:10391798 nonsynonymous SNV 0.970 1 21 hPsi_associated_SNPs_106198 0 0 0 0 0 Nucleus 0 0.438597083164542 0.990974426269532 0 hPsi_site_5158 iPseU_CNN:0.990974426269532;iRNA_PseU:0 5159 chr9 140318104 140318104 1 + C T rs199666822 140318104 + 140318084 140318124 41 GCGCCGCCCGCCAGGCTGTGCTTCAACGCGGGCTGCGTGCA GCGCCGCCCGCCAGGCTGTGTTTCAACGCGGGCTGCGTGCA Direct Gain 0 0.950657320817571 0 0.9559166431427 prediction 0.901314641635143 Functional Gain - NOXA1 ENSG00000188747 CDS Human protein_coding chr9:140318104 chr9:140318104 synonymous SNV . 0 21 hPsi_associated_SNPs_106199 0 0 0 0 1 nucleus 0 0.438740768083234 0.9118332862854 0 hPsi_site_5159 iPseU_CNN:0.9118332862854;iRNA_PseU:0 5160 chr8 90798866 90798866 1 + G T LUSC 90798866 + 90798846 90798886 41 ATGAAAATAGTGGTTCTCCTGAAACTTCAAGGTCCCTGCCA ATGAAAATAGTGGTTCTCCTTAAACTTCAAGGTCCCTGCCA Direct Gain 0 0.950648770852711 0 0.993117153644562 prediction 0.901297541705423 Functional Gain - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90798866 chr8:90798866 stopgain 0.279 0 21 hPsi_associated_SNPs_106200 0 0 1 0 2 chromatin 0 0.438714893922114 0.986234307289124 0 hPsi_site_5160 iPseU_CNN:0.986234307289124;iRNA_PseU:0 5161 chr14 20528800 20528800 1 + C T SKCM 20528800 + 20528780 20528820 41 TACACCCTGGAATTATTTGTCATTGCTGACAGCGGGCTGCT TACACCCTGGAATTATTTGTTATTGCTGACAGCGGGCTGCT Direct Gain 0 0.950645896217647 0 0.991893351078033 prediction 0.901291792435293 Functional Gain - OR4L1 ENSG00000176246 CDS Human protein_coding chr14:20528800 chr14:20528800 synonymous SNV . 0 21 hPsi_associated_SNPs_106201 0 0 0 0 0 unknown 0 0.438718592999938 0.983786702156066 0 hPsi_site_5161 iPseU_CNN:0.983786702156066;iRNA_PseU:0 5162 chr16 30080194 30080194 1 + C A KIRC 30080194 - 30080174 30080214 41 AGCACACAACGCCACTTGGCGAAGTCAGCTCCGTCCTTCTT AGCACACAACGCCACTTGGCTAAGTCAGCTCCGTCCTTCTT Direct Gain 0 0.950644404114653 0 0.999943375587463 prediction 0.901288808229306 Functional Gain - ALDOA ENSG00000149925 CDS Human protein_coding chr16:30080194 chr16:30080194 nonsynonymous SNV 0.996 5 21 hPsi_associated_SNPs_106202 0 0 0 0 0 Cytosol 0 0.393719879647773 0.999886751174926 0 hPsi_site_5162 iPseU_CNN:0.999886751174926;iRNA_PseU:0 5163 chr17 79502107 79502107 1 + G A ESCA 79502107 - 79502087 79502127 41 GAAGGTCTCGTGGTCTAGTTCATCATCCTGATTGGCTGAGA GAAGGTCTCGTGGTCTAGTTTATCATCCTGATTGGCTGAGA Direct Gain 0 0.95064200649793 0 0.966171085834503 prediction 0.90128401299586 Functional Gain - FSCN2 ENSG00000186765 CDS Human protein_coding chr17:79502107 chr17:79502107 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_106203 0 0 1 0 0 chromatin 0 0.438718840464749 0.932342171669006 0 hPsi_site_5163 iPseU_CNN:0.932342171669006;iRNA_PseU:0 5164 chr20 18297193 18297193 1 + T A rs1050476 18297193 - 18297173 18297213 41 GAGTGAGCCCGCTTGTGTGTAATTAGAGCTGACTTATTGCC GAGTGAGCCCGCTTGTGTGTTATTAGAGCTGACTTATTGCC Direct Gain 0 0.950640134685619 0 0.999408841133118 prediction 0.901280269371238 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18297193 chr20:18297193 synonymous SNV . 0 21 hPsi_associated_SNPs_106204 0 0 0 0 0 Cytosol 0 0.446669402493385 0.998817682266236 0 hPsi_site_5164 iPseU_CNN:0.998817682266236;iRNA_PseU:0 5165 chr19 54205992 54205992 1 + C A UCEC 54205992 - 54205972 54206012 41 CCTCTGGAGGGCCACAGCATGACATATTCTTGCTCCAACAC CCTCTGGAGGGCCACAGCATTACATATTCTTGCTCCAACAC Direct Gain 0 0.95063814409649 0 0.97929835319519 prediction 0.90127628819298 Functional Gain - MIR518B ENSG00000207862 ncRNA_exonic Human miRNA chr19:54205992 chr19:54205992 . . 0 21 hPsi_associated_SNPs_106205 0 0 0 0 0 unknown 0 0.437269489582711 0.95859670639038 0 hPsi_site_5165 iPseU_CNN:0.95859670639038;iRNA_PseU:0 5166 chr2 173292654 173292654 1 + C T THCA 173292654 + 173292634 173292674 41 CCCGGGAGCCTCTTCGGCTTCTCGCTGGCCATGCACTGGCA CCCGGGAGCCTCTTCGGCTTTTCGCTGGCCATGCACTGGCA Direct Gain 0 0.950633264466352 0 0.0903072357177734 prediction 0.901266528932704 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173292654 chr2:173292654 synonymous SNV . 0 21 hPsi_associated_SNPs_106206 0 0 1 0 1 Nucleus 0 0.438714447045877 0 0 hPsi_site_5166 iPseU_CNN:0;iRNA_PseU:0 5167 chr6 97063590 97063590 1 + C A LUSC 97063590 - 97063570 97063610 41 AGAAGATTTCCTTGTTCTGGGTCAGGAAGCCTTTACCCACC AGAAGATTTCCTTGTTCTGGTTCAGGAAGCCTTTACCCACC Direct Gain 0 0.950628881754392 0 0.796228349208832 prediction 0.901257763508783 Functional Gain - FHL5 ENSG00000112214 CDS Human protein_coding chr6:97063590 chr6:97063590 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_106207 0 0 0 0 0 exosome 0 0.438718592995102 0.592456698417664 0 hPsi_site_5167 iPseU_CNN:0.592456698417664;iRNA_PseU:0 5168 chr5 90074819 90074819 1 + G A BLCA 90074819 - 90074799 90074839 41 TCAACATGCAGACTTTTCCTCATCTCCCCTGCTTCAAAGAG TCAACATGCAGACTTTTCCTTATCTCCCCTGCTTCAAAGAG Direct Gain 0 0.950627968710629 0 0.993612110614777 prediction 0.901255937421258 Functional Gain - ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90074819 chr5:90074819 nonsynonymous SNV 0.040 0 21 hPsi_associated_SNPs_106208 0 0 0 0 0 Nucleus 0 0.438718751290445 0.987224221229554 0 hPsi_site_5168 iPseU_CNN:0.987224221229554;iRNA_PseU:0 5169 chr2 84832648 84832648 1 + G T UCEC 84832648 + 84832628 84832668 41 AGGACTCTTGGAAAACAACTGAATTTGTCATTCTGCCTCAC AGGACTCTTGGAAAACAACTTAATTTGTCATTCTGCCTCAC Direct Gain 0 0.950621328162837 0 0.999597430229187 prediction 0.901242656325674 Functional Gain - DNAH6 ENSG00000115423 CDS Human protein_coding chr2:84832648 chr2:84832648 stopgain 0.997 0 21 hPsi_associated_SNPs_106209 0 0 0 0 2 Exosome 0 0.439221200501872 0.999194860458374 0 hPsi_site_5169 iPseU_CNN:0.999194860458374;iRNA_PseU:0 5170 chrX 140969256 140969256 1 + C T SKCM 140969256 + 140969236 140969276 41 TGGACAAGTTGGTGCAGTTTCTTCTCCTCAAATATCAAGCA TGGACAAGTTGGTGCAGTTTTTTCTCCTCAAATATCAAGCA Direct Gain 0 0.950619736171418 0 0.208042800426483 prediction 0.901239472342836 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140969256 chrX:140969256 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_106210 0 0 0 0 1 exosome 0 0.438063344458626 0 0 hPsi_site_5170 iPseU_CNN:0;iRNA_PseU:0 5171 chr6 28056521 28056521 1 + C T UCEC 28056521 + 28056501 28056541 41 GGAAAAAGAATCAGGGGAGTCTCAGAGACTCTCGTCTGCCC GGAAAAAGAATCAGGGGAGTTTCAGAGACTCTCGTCTGCCC Direct Gain 0 0.950617471837148 0 0.836683452129364 prediction 0.901234943674296 Functional Gain - ZNF165 ENSG00000197279 CDS Human protein_coding chr6:28056521 chr6:28056521 nonsynonymous SNV 0.018 1 21 hPsi_associated_SNPs_106211 0 0 0 0 0 Endoplasmic reticulum 0 0.438689493583629 0.673366904258728 0 hPsi_site_5171 iPseU_CNN:0.673366904258728;iRNA_PseU:0 5172 chr9 78974219 78974219 1 + G A rs79943184 78974219 - 78974199 78974239 41 GAATACCAGGAGGCAGCAGACACCTCCACAATGCAGCTCGG GAATACCAGGAGGCAGCAGATACCTCCACAATGCAGCTCGG Direct Gain 0 0.950617407194718 0 0.993423700332642 prediction 0.901234814389436 Functional Gain - PCSK5 ENSG00000099139 UTR3 Human protein_coding chr9:78974219 chr9:78974219 . . 0 21 hPsi_associated_SNPs_106212 0 0 0 0 0 exosome 0 0.438616761543594 0.986847400665284 0 hPsi_site_5172 iPseU_CNN:0.986847400665284;iRNA_PseU:0 5173 chr1 35824978 35824978 1 + G A SKCM 35824978 - 35824958 35824998 41 GGGTTTATCCAACCGTTTTTCACGTTCATAAGTTAGGTCTC GGGTTTATCCAACCGTTTTTTACGTTCATAAGTTAGGTCTC Direct Gain 0 0.950609911943782 0 0.99895852804184 prediction 0.901219823887563 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824978 chr1:35824978 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106213 0 0 0 0 0 Cytosol 0 0.438718592994475 0.99791705608368 0 hPsi_site_5173 iPseU_CNN:0.99791705608368;iRNA_PseU:0 5174 chr1 186143682 186143682 1 + G T LUSC 186143682 + 186143662 186143702 41 AGATGGGACCCATCAGTGCAGATATAACCAGATATGTGAGA AGATGGGACCCATCAGTGCATATATAACCAGATATGTGAGA Direct Gain 0 0.950608961068662 0 0.00228351354598999 prediction 0.901217922137323 Functional Gain - HMCN1 ENSG00000143341 CDS Human protein_coding chr1:186143682 chr1:186143682 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106214 0 0 0 0 2 nucleus 0 0.438679123546477 0 0 hPsi_site_5174 iPseU_CNN:0;iRNA_PseU:0 5175 chr16 89623349 89623349 1 + C T UCEC 89623349 + 89623329 89623369 41 ACTATGAGGACATTGAGGCTCTCATTGGCCCGCCGCCCCAT ACTATGAGGACATTGAGGCTTTCATTGGCCCGCCGCCCCAT Direct Gain 0 0.950603738413022 0 0.999976575374603 prediction 0.901207476826045 Functional Gain - SPG7 ENSG00000197912 CDS Human protein_coding chr16:89623349 chr16:89623349 nonsynonymous SNV 0.846 5 21 hPsi_associated_SNPs_106215 0 0 1 0 1 Nucleus 0 0.438718592852194 0.999953150749206 0 hPsi_site_5175 iPseU_CNN:0.999953150749206;iRNA_PseU:0 5176 chr13 92002896 92002896 1 + G T UCEC 92002896 + 92002876 92002916 41 GTGCTTACAGTGCAGGTAGTGATATGTGCATCTACTGCAGT GTGCTTACAGTGCAGGTAGTTATATGTGCATCTACTGCAGT Direct Gain 0 0.950602136226829 0 0.999793529510498 prediction 0.901204272453657 Functional Gain - MIR17;MIR17HG ENSG00000215417 ncRNA_exonic Human processed_transcript chr13:92002896 chr13:92002896 . . 0 21 hPsi_associated_SNPs_106216 0 0 1 0 0 unknown 0 0.441890534289586 0.999587059020996 0 hPsi_site_5176 iPseU_CNN:0.999587059020996;iRNA_PseU:0 5177 chr19 57133999 57133999 1 + C T SKCM 57133999 + 57133979 57134019 41 CAGTGCGGGAAGTCCTTCATCAAGAACTCCTCCCTCACTGT CAGTGCGGGAAGTCCTTCATTAAGAACTCCTCCCTCACTGT Direct Gain 0 0.950601683899846 0 0.327919661998749 prediction 0.901203367799691 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133999 chr19:57133999 synonymous SNV . 0 21 hPsi_associated_SNPs_106217 0 0 1 0 0 exosome 0 0.438604512128001 0 0 hPsi_site_5177 iPseU_CNN:0;iRNA_PseU:0 5178 chr12 52698808 52698808 1 + G A rs78831098 52698808 - 52698788 52698828 41 GGCCCCTGAGCCCGCACCTCCTCATACAGCCGCCTCAGGAA GGCCCCTGAGCCCGCACCTCTTCATACAGCCGCCTCAGGAA Direct Gain 0 0.950589361004791 0 0.564414978027344 prediction 0.901178722009581 Functional Gain - KRT86 ENSG00000170442 CDS Human protein_coding chr12:52698808 chr12:52698808 synonymous SNV . 0 21 hPsi_associated_SNPs_106218 0 0 0 0 0 nucleus 0 0.438718617260952 0.128829956054688 0 hPsi_site_5178 iPseU_CNN:0.128829956054688;iRNA_PseU:0 5179 chr2 33246085 33246085 1 + C A LUSC 33246085 - 33246065 33246105 41 CCAAAGACTGGTGACGAGGTGTCCTGGGCAGCTATTGTTTC CCAAAGACTGGTGACGAGGTTTCCTGGGCAGCTATTGTTTC Direct Gain 0 0.950588448769965 0 0.0147062838077545 prediction 0.90117689753993 Functional Gain - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33246085 chr2:33246085 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_106219 0 0 0 0 0 Endoplasmic reticulum 0 0.43871773220873 0 0 hPsi_site_5179 iPseU_CNN:0;iRNA_PseU:0 5180 chr12 96350484 96350484 1 + G T UCEC 96350484 + 96350464 96350504 41 TGGCAGGAGCCACCTACATGGAAATTCACCAGGCCGGAGGA TGGCAGGAGCCACCTACATGTAAATTCACCAGGCCGGAGGA Direct Gain 0 0.950581546931118 0 0.340398341417313 prediction 0.901163093862235 Functional Gain - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96350484 chr12:96350484 stopgain 0.994 0 21 hPsi_associated_SNPs_106220 0 0 1 0 1 Cytosol 0 0.44222538885601 0 0 hPsi_site_5180 iPseU_CNN:0;iRNA_PseU:0 5181 chr17 55058493 55058493 1 + G A LIHC 55058493 - 55058473 55058513 41 GGCATCCTTGCGGACCGTCACATAATCCCATACTTCCTTGC GGCATCCTTGCGGACCGTCATATAATCCCATACTTCCTTGC Direct Gain 0 0.95057897859932 0 0.997585415840149 prediction 0.901157957198641 Functional Gain - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55058493 chr17:55058493 nonsynonymous SNV 0.267 4 21 hPsi_associated_SNPs_106221 0 0 0 0 0 Ribosome 0 0.438718599827722 0.995170831680298 0 hPsi_site_5181 iPseU_CNN:0.995170831680298;iRNA_PseU:0 5182 chr19 41078194 41078194 1 + G A rs139049712 41078194 - 41078174 41078214 41 TCTGGGGAAGGGGCCCAGCCCACCTGCCCACCAAGTGTCCC TCTGGGGAAGGGGCCCAGCCTACCTGCCCACCAAGTGTCCC Direct Gain 0 0.950574928266436 0 0.911578297615051 prediction 0.901149856532871 Functional Gain - SPTBN4 ENSG00000160460 intronic Human protein_coding chr19:41078194 chr19:41078194 . . 0 21 hPsi_associated_SNPs_106222 0 0 0 0 0 cytosol 0 0.438719592823744 0.823156595230102 0 hPsi_site_5182 iPseU_CNN:0.823156595230102;iRNA_PseU:0 5183 chr7 128470943 128470943 1 + C T ESCA 128470943 + 128470923 128470963 41 AGCCAGAAGCGCATGTACCGCAAGTTCCATCCGCGCCCCAA AGCCAGAAGCGCATGTACCGTAAGTTCCATCCGCGCCCCAA Direct Gain 0 0.950566613525518 0 0.99999988079071 prediction 0.901133227051036 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128470943 chr7:128470943 synonymous SNV . 0 21 hPsi_associated_SNPs_106223 0 0 0 0 0 chromatin 0 0.438727365590897 0.99999976158142 0 hPsi_site_5183 iPseU_CNN:0.99999976158142;iRNA_PseU:0 5184 chr16 90110153 90110153 1 + G T rs573324912 90110153 + 90110133 90110173 41 GTGCTGGCACTAACTTCATTGACACCTGAGTCACAGCTGCC GTGCTGGCACTAACTTCATTTACACCTGAGTCACAGCTGCC Direct Gain 0 0.950566082609372 0 0.99950647354126 prediction 0.901132165218745 Functional Gain - URAHP ENSG00000222019 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:90110153 chr16:90110153 . . 0 21 hPsi_associated_SNPs_106224 0 0 1 0 0 unknown 0 0.438234211327504 0.99901294708252 0 hPsi_site_5184 iPseU_CNN:0.99901294708252;iRNA_PseU:0 5185 chr9 138477183 138477183 1 + T A rs11103077 138477183 - 138477163 138477203 41 AAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCA AAAGTGCTGGGATTACAGGCTTGAGCCACCGCGCCCGGCCA Direct Gain 0 0.950560349084372 0 0.42893573641777 prediction 0.901120698168743 Functional Gain - LINC01502 ENSG00000237339 ncRNA_exonic Human lincRNA chr9:138477183 chr9:138477183 . . 0 21 hPsi_associated_SNPs_106225 0 0 0 0 0 unknown 0 0.438703274118703 0 0 hPsi_site_5185 iPseU_CNN:0;iRNA_PseU:0 5186 chr19 10657566 10657566 1 + C T STAD 10657566 + 10657546 10657586 41 CCCCCCTGAGCTGTCAGGGTCAGCCTCTCCCAGCCGGTACC CCCCCCTGAGCTGTCAGGGTTAGCCTCTCCCAGCCGGTACC Direct Gain 0 0.950560315722505 0 0.999170660972595 prediction 0.90112063144501 Functional Gain - ATG4D ENSG00000130734 CDS Human protein_coding chr19:10657566 chr19:10657566 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_106226 0 0 0 0 1 Ribosome 0 0.438718593021567 0.99834132194519 0 hPsi_site_5186 iPseU_CNN:0.99834132194519;iRNA_PseU:0 5187 chr4 175898316 175898316 1 + C T BLCA 175898316 + 175898296 175898336 41 ATATATAAAGTGTAATATCTCAGATGTCCAGTGTGGAAGAA ATATATAAAGTGTAATATCTTAGATGTCCAGTGTGGAAGAA Direct Gain 0 0.950559702545625 0 0.00310367345809937 prediction 0.90111940509125 Functional Gain - ADAM29 ENSG00000168594 CDS Human protein_coding chr4:175898316 chr4:175898316 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_106227 0 0 1 0 0 exosome 0 0.438755518062746 0 0 hPsi_site_5187 iPseU_CNN:0;iRNA_PseU:0 5188 chr11 1278842 1278842 1 + G T LUSC 1278842 + 1278822 1278862 41 GCAGTGCAAGCCCCTGCCCTGTGACGCCCAGGGTCAGCCCC GCAGTGCAAGCCCCTGCCCTTTGACGCCCAGGGTCAGCCCC Direct Gain 0 0.950556358307883 0 0.997154831886292 prediction 0.901112716615767 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1278842 chr11:1278842 nonsynonymous SNV 0.004 3 21 hPsi_associated_SNPs_106228 0 0 0 0 2 Endoplasmic reticulum 0 0.438718593012621 0.994309663772584 0 hPsi_site_5188 iPseU_CNN:0.994309663772584;iRNA_PseU:0 5189 chr15 29390737 29390737 1 + C T SKCM 29390737 + 29390717 29390757 41 CTGACGGAAGTGGACCTCTTCATTTCCACCCAGAGGATCAA CTGACGGAAGTGGACCTCTTTATTTCCACCCAGAGGATCAA Direct Gain 0 0.950555566077624 0 0.999071836471558 prediction 0.901111132155249 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29390737 chr15:29390737 synonymous SNV . 0 21 hPsi_associated_SNPs_106229 0 0 1 0 2 Cytosol 0 0.438719441255198 0.998143672943116 0 hPsi_site_5189 iPseU_CNN:0.998143672943116;iRNA_PseU:0 5190 chr12 124092871 124092871 1 + C T rs148070370 124092871 + 124092851 124092891 41 GGCTTTGTGAACCATATGGTCTCCATCGCACTTACTCAACT GGCTTTGTGAACCATATGGTTTCCATCGCACTTACTCAACT Direct Gain 0 0.950554704799748 0 0.849582076072693 prediction 0.901109409599496 Functional Gain - DDX55 ENSG00000111364 intronic Human protein_coding chr12:124092871 chr12:124092871 . . 0 21 hPsi_associated_SNPs_106230 0 0 1 0 0 Nucleus 0 0.43846882280298 0.699164152145386 0 hPsi_site_5190 iPseU_CNN:0.699164152145386;iRNA_PseU:0 5191 chr3 111795777 111795777 1 + T A UCEC 111795777 - 111795757 111795797 41 ACCGGGGAGACAAACTTGGCATTCCCCTGAACATACATCCC ACCGGGGAGACAAACTTGGCTTTCCCCTGAACATACATCCC Direct Gain 0 0.950551332776102 0 0.992553770542145 prediction 0.901102665552205 Functional Gain - TMPRSS7 ENSG00000176040 CDS Human protein_coding chr3:111795777 chr3:111795777 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106231 0 0 0 0 0 exosome 0 0.438718592995108 0.98510754108429 0 hPsi_site_5191 iPseU_CNN:0.98510754108429;iRNA_PseU:0 5192 chr19 20229486 20229486 1 + G A rs1725935 20229486 - 20229466 20229506 41 GGATGAAATAAATGCTTTGCCACATTTATCACACTTGTAGG GGATGAAATAAATGCTTTGCTACATTTATCACACTTGTAGG Direct Gain 0 0.950549784601942 0 0.585935056209564 prediction 0.901099569203884 Functional Gain - ZNF90 ENSG00000213988 CDS Human protein_coding chr19:20229486 chr19:20229486 nonsynonymous SNV 0.064 2 21 hPsi_associated_SNPs_106232 0 0 0 0 0 exosome 0 0.438731177223858 0.171870112419128 0 hPsi_site_5192 iPseU_CNN:0.171870112419128;iRNA_PseU:0 5193 chr10 71712652 71712652 1 + G A LUSC 71712652 - 71712632 71712672 41 TTAGGCCCTCTAGAGCCTTTCTTCCCCCTCTCCCCCTGTAA TTAGGCCCTCTAGAGCCTTTTTTCCCCCTCTCCCCCTGTAA Direct Gain 0 0.950546248845218 0 0.725521981716156 prediction 0.901092497690437 Functional Gain - COL13A1 ENSG00000197467 CDS Human protein_coding chr10:71712652 chr10:71712652 synonymous SNV . 0 21 hPsi_associated_SNPs_106233 0 0 0 0 0 exosome 0 0.438718592993617 0.451043963432312 0 hPsi_site_5193 iPseU_CNN:0.451043963432312;iRNA_PseU:0 5194 chr16 66514672 66514672 1 + C T UCEC 66514672 + 66514652 66514692 41 CAAGGTGGCCTTCACACGGTCTCCATGGACACCCTTCCCCC CAAGGTGGCCTTCACACGGTTTCCATGGACACCCTTCCCCC Direct Gain 0 0.950539493186157 0 0.998700618743896 prediction 0.901078986372315 Functional Gain - BEAN1 ENSG00000166546 CDS Human protein_coding chr16:66514672 chr16:66514672 synonymous SNV . 0 21 hPsi_associated_SNPs_106234 0 0 0 0 0 nucleus 0 0.438714956717802 0.997401237487792 0 hPsi_site_5194 iPseU_CNN:0.997401237487792;iRNA_PseU:0 5195 chr16 68721503 68721503 1 + C T SKCM 68721503 + 68721483 68721523 41 GTCCCTGAGCCCCGTCAGATCACCATCTGCAACCAAAGCCC GTCCCTGAGCCCCGTCAGATTACCATCTGCAACCAAAGCCC Direct Gain 0 0.950538566444077 0 0.999202132225037 prediction 0.901077132888154 Functional Gain - CDH3 ENSG00000062038 CDS Human protein_coding chr16:68721503 chr16:68721503 synonymous SNV . 0 21 hPsi_associated_SNPs_106235 0 0 0 0 1 Endoplasmic reticulum 0 0.410331248663623 0.998404264450074 0 hPsi_site_5195 iPseU_CNN:0.998404264450074;iRNA_PseU:0 5196 chr16 66612833 66612833 1 + G A LUAD 66612833 - 66612813 66612853 41 GGCGGGGGAAAGCTTCCTTTCAACTTCGACTCCCAGGAATC GGCGGGGGAAAGCTTCCTTTTAACTTCGACTCCCAGGAATC Direct Gain 0 0.950538561979393 0 0.990077614784241 prediction 0.901077123958786 Functional Gain - CKLF-CMTM1;CMTM1 ENSG00000089505;ENSG00000254788 CDS Human other chr16:66612833 chr16:66612833 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_106236 0 0 0 0 0 unknown 0 0.438718592995126 0.980155229568482 0 hPsi_site_5196 iPseU_CNN:0.980155229568482;iRNA_PseU:0 5197 chr12 44162031 44162031 1 + T A rs141039652 44162031 - 44162011 44162051 41 TCATCACCAGATGGTTTTTTAATAGCTACAGCTAACTTCTT TCATCACCAGATGGTTTTTTTATAGCTACAGCTAACTTCTT Direct Gain 0 0.950535401114795 0 0.37793755531311 prediction 0.90107080222959 Functional Gain - IRAK4 ENSG00000198001 CDS Human protein_coding chr12:44162031 chr12:44162031 synonymous SNV . 0 21 hPsi_associated_SNPs_106237 0 0 0 0 0 Cytosol 0 0.438718590791734 0 0 hPsi_site_5197 iPseU_CNN:0;iRNA_PseU:0 5198 chr1 50666604 50666604 1 + C T SKCM 50666604 + 50666584 50666624 41 ACAGGAACTGGGTGGTGCATCTTTGTCTACAACCTGTCCCC ACAGGAACTGGGTGGTGCATTTTTGTCTACAACCTGTCCCC Direct Gain 0 0.950535090759802 0 0.750384449958801 prediction 0.901070181519603 Functional Gain - ELAVL4 ENSG00000162374 CDS Human protein_coding chr1:50666604 chr1:50666604 synonymous SNV . 0 21 hPsi_associated_SNPs_106238 0 0 0 0 1 exosome 0 0.43871956616142 0.500768899917602 0 hPsi_site_5198 iPseU_CNN:0.500768899917602;iRNA_PseU:0 5199 chr12 2693768 2693768 1 + G T LUSC 2693768 + 2693748 2693788 41 GGAGGAAGAGGAGAAGGAGAGAAAGAAGCTGGCCAGGTAAC GGAGGAAGAGGAGAAGGAGATAAAGAAGCTGGCCAGGTAAC Direct Gain 0 0.950532068168796 0 0.970290422439575 prediction 0.901064136337592 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2693768 chr12:2693768 nonsynonymous SNV 0.978 5 21 hPsi_associated_SNPs_106239 0 0 0 0 2 Cytosol 0 0.438717032305085 0.94058084487915 0 hPsi_site_5199 iPseU_CNN:0.94058084487915;iRNA_PseU:0 5200 chr9 37486062 37486062 1 + G A UCEC 37486062 - 37486042 37486082 41 TACTGCCACCTCGCACTCGGCAACACCTCCGCCGCCATCTC TACTGCCACCTCGCACTCGGTAACACCTCCGCCGCCATCTC Direct Gain 0 0.95052724919643 0 0.969923138618469 prediction 0.90105449839286 Functional Gain - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37486062 chr9:37486062 synonymous SNV . 0 21 hPsi_associated_SNPs_106240 0 0 0 0 0 Ribosome 0 0.43871862803518 0.939846277236938 0 hPsi_site_5200 iPseU_CNN:0.939846277236938;iRNA_PseU:0 5201 chr1 146757132 146757132 1 + G A rs142236750 146757132 - 146757112 146757152 41 TCAGCCTCTTCCTTTTGCCTCTTCTTCTCCTCTATGAGTCT TCAGCCTCTTCCTTTTGCCTTTTCTTCTCCTCTATGAGTCT Direct Gain 0 0.950520083634122 0 0.803784847259521 prediction 0.901040167268243 Functional Gain - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146757132 chr1:146757132 synonymous SNV . 0 21 hPsi_associated_SNPs_106241 0 0 0 0 0 Ribosome 0 0.43870836815299 0.607569694519042 0 hPsi_site_5201 iPseU_CNN:0.607569694519042;iRNA_PseU:0 5202 chr11 51515761 51515761 1 + C T LUSC 51515761 + 51515741 51515781 41 GCAACCATACAGATCCTCTTCATCTTCCAATTACCTTTCTG GCAACCATACAGATCCTCTTTATCTTCCAATTACCTTTCTG Direct Gain 0 0.950502822506552 0 0.980627954006195 prediction 0.901005645013103 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515761 chr11:51515761 synonymous SNV . 0 21 hPsi_associated_SNPs_106242 0 0 0 0 0 unknown 0 0.43871859318553 0.96125590801239 0 hPsi_site_5202 iPseU_CNN:0.96125590801239;iRNA_PseU:0 5203 chr12 55725604 55725604 1 + G T KIRC 55725604 + 55725584 55725624 41 TTAAGTGTTACTGGAAACCTGACTATCATCACCCTAACCTT TTAAGTGTTACTGGAAACCTTACTATCATCACCCTAACCTT Direct Gain 0 0.950488035416677 0 0.944441258907318 prediction 0.900976070833355 Functional Gain - OR6C3 ENSG00000205329 CDS Human protein_coding chr12:55725604 chr12:55725604 synonymous SNV . 0 21 hPsi_associated_SNPs_106243 0 0 0 0 0 unknown 0 0.438718735440463 0.888882517814636 0 hPsi_site_5203 iPseU_CNN:0.888882517814636;iRNA_PseU:0 5204 chr5 140865412 140865412 1 + C T COAD 140865412 + 140865392 140865432 41 GGGAACCCGCCGAGATCTGGCACCGCAGAGCTCCGGGTATC GGGAACCCGCCGAGATCTGGTACCGCAGAGCTCCGGGTATC Direct Gain 0 0.950478478198675 0 0.999929070472717 prediction 0.90095695639735 Functional Gain - PCDHGC4 ENSG00000242419 CDS Human protein_coding chr5:140865412 chr5:140865412 synonymous SNV . 0 21 hPsi_associated_SNPs_106244 0 0 0 0 0 exosome 0 0.438718584415734 0.999858140945434 0 hPsi_site_5204 iPseU_CNN:0.999858140945434;iRNA_PseU:0 5205 chr16 29819764 29819764 1 + C T rs370496515 29819764 + 29819744 29819784 41 TCTTCAAGGCCTCATCATGTCACTCCCATTTCCTACAGATC TCTTCAAGGCCTCATCATGTTACTCCCATTTCCTACAGATC Direct Gain 0 0.950478347294382 0 0.998743832111359 prediction 0.900956694588765 Functional Gain - MAZ ENSG00000103495 intronic Human protein_coding chr16:29819764 chr16:29819764 . . 0 21 hPsi_associated_SNPs_106245 0 0 1 0 0 Cytosol 0 0.440716239554374 0.997487664222718 0 hPsi_site_5205 iPseU_CNN:0.997487664222718;iRNA_PseU:0 5206 chr2 186671509 186671509 1 + G A LUAD 186671509 - 186671489 186671529 41 GATGAGTTTCATAGCAGTGTCATAGAGTTTGGCTTGATTTT GATGAGTTTCATAGCAGTGTTATAGAGTTTGGCTTGATTTT Direct Gain 0 0.950475633688572 0 0.000191926956176758 prediction 0.900951267377144 Functional Gain - FSIP2 ENSG00000188738 CDS Human protein_coding chr2:186671509 chr2:186671509 nonsynonymous SNV 0.558 1 21 hPsi_associated_SNPs_106246 0 0 0 0 0 chromatin 0 0.439058090526465 0 0 hPsi_site_5206 iPseU_CNN:0;iRNA_PseU:0 5207 chr11 65180832 65180832 1 + G A rs145586051 65180832 - 65180812 65180852 41 GAAAACACATCATCTGTGTACTCAGACACACACACTCCAAC GAAAACACATCATCTGTGTATTCAGACACACACACTCCAAC Direct Gain 0 0.950475632556248 0 0.999998986721039 prediction 0.900951265112496 Functional Gain - FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65180832 chr11:65180832 . . 0 21 hPsi_associated_SNPs_106247 0 0 0 0 0 Ribosome 0 0.434843048273037 0.999997973442078 0 hPsi_site_5207 iPseU_CNN:0.999997973442078;iRNA_PseU:0 5208 chr12 2602426 2602426 1 + C T LUSC 2602426 + 2602406 2602446 41 GGGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCCCGGCTG GGGCGGCAGTGCCAGAACGGTACGGTGTGCAAGCCCGGCTG Direct Gain 0 0.950475613811434 0 0.999999463558197 prediction 0.900951227622868 Functional Gain - CACNA1C ENSG00000151067 CDS Human protein_coding chr12:2602426 chr12:2602426 synonymous SNV . 0 21 hPsi_associated_SNPs_106248 0 0 0 0 2 Cytosol 0 0.438722693452377 0.999998927116394 0 hPsi_site_5208 iPseU_CNN:0.999998927116394;iRNA_PseU:0 5209 chr5 57913527 57913527 1 + G A COAD 57913527 - 57913507 57913547 41 GAGTAATTTGAACATGTAGTCAAAGTTCTGATCAGAGGAGT GAGTAATTTGAACATGTAGTTAAAGTTCTGATCAGAGGAGT Direct Gain 0 0.950475523820208 0 0.997759819030762 prediction 0.900951047640416 Functional Gain - RAB3C ENSG00000152932 CDS Human protein_coding chr5:57913527 chr5:57913527 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_106249 0 0 0 0 0 Endoplasmic reticulum 0 0.447015038253559 0.995519638061524 0 hPsi_site_5209 iPseU_CNN:0.995519638061524;iRNA_PseU:0 5210 chr10 126675551 126675551 1 + T A rs577927716 126675551 - 126675531 126675571 41 GGTCAGGGTCACTGATTGATAATAAATAAATAAATAATAGA GGTCAGGGTCACTGATTGATTATAAATAAATAAATAATAGA Direct Gain 0 0.950472929995464 0 0.0224269330501556 prediction 0.900945859990928 Functional Gain - ZRANB1 ENSG00000019995 UTR3 Human protein_coding chr10:126675551 chr10:126675551 . . 0 21 hPsi_associated_SNPs_106250 0 0 0 0 0 Ribosome 0 0.438718521422312 0 0 hPsi_site_5210 iPseU_CNN:0;iRNA_PseU:0 5211 chr14 102486368 102486368 1 + G A BLCA 102486368 - 102486348 102486388 41 TTGGAAGAGACGCAGAGCTTCATGTGCCCAAATCCGAATGA TTGGAAGAGACGCAGAGCTTTATGTGCCCAAATCCGAATGA Direct Gain 0 0.95047206122602 0 0.999479293823242 prediction 0.90094412245204 Functional Gain - DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102486368 chr14:102486368 nonsynonymous SNV 0.966 4 21 hPsi_associated_SNPs_106251 0 0 0 0 0 Cytosol 0 0.438702975079319 0.998958587646484 0 hPsi_site_5211 iPseU_CNN:0.998958587646484;iRNA_PseU:0 5212 chr16 55806315 55806315 1 + C T CESC 55806315 + 55806295 55806335 41 ACAGCCCGGGGAACTGGGGTCACCTGGACCAGCTGGCTGCC ACAGCCCGGGGAACTGGGGTTACCTGGACCAGCTGGCTGCC Direct Gain 0 0.950470631765896 0 0.997094869613647 prediction 0.900941263531791 Functional Gain - CES1P1 ENSG00000228695 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:55806315 chr16:55806315 . . 0 21 hPsi_associated_SNPs_106252 0 0 0 0 1 unknown 0 0.438570892967491 0.994189739227294 0 hPsi_site_5212 iPseU_CNN:0.994189739227294;iRNA_PseU:0 5213 chr2 128393818 128393818 1 + G A LUSC 128393818 - 128393798 128393838 41 ACCTTGGCCTCCTCCACTGTCTTGTCCTTATGCTTGTCATA ACCTTGGCCTCCTCCACTGTTTTGTCCTTATGCTTGTCATA Direct Gain 0 0.950468435007069 0 0.895145893096924 prediction 0.900936870014138 Functional Gain - MYO7B ENSG00000169994 CDS Human protein_coding chr2:128393818 chr2:128393818 synonymous SNV . 0 21 hPsi_associated_SNPs_106253 0 0 0 0 0 exosome 0 0.43871857649459 0.790291786193848 0 hPsi_site_5213 iPseU_CNN:0.790291786193848;iRNA_PseU:0 5214 chr2 220313881 220313881 1 + G T COAD 220313881 + 220313861 220313901 41 AGGGCGGGGCCTGAGGCAGAGAAGAGGCTTCGCAGAGGGCC AGGGCGGGGCCTGAGGCAGATAAGAGGCTTCGCAGAGGGCC Direct Gain 0 0.95046453587399 0 0.880509734153748 prediction 0.900929071747981 Functional Gain - SPEG ENSG00000072195 CDS Human protein_coding chr2:220313881 chr2:220313881 nonsynonymous SNV 0.966 1 21 hPsi_associated_SNPs_106254 0 0 0 0 0 Nucleus 0 0.438716088175602 0.761019468307496 0 hPsi_site_5214 iPseU_CNN:0.761019468307496;iRNA_PseU:0 5215 chr10 124339165 124339165 1 + T A LUSC 124339165 - 124339145 124339185 41 GGTGCCCCAGGAGCCTCGGTATAGGACCTCCACTCGGCCTC GGTGCCCCAGGAGCCTCGGTTTAGGACCTCCACTCGGCCTC Direct Gain 0 0.950463694100717 0 0.999814748764038 prediction 0.900927388201433 Functional Gain - DMBT1 ENSG00000187908 CDS Human protein_coding chr10:124339165 chr10:124339165 nonsynonymous SNV 0.045 3 21 hPsi_associated_SNPs_106255 0 0 0 0 0 exosome 0 0.438718593101192 0.999629497528076 0 hPsi_site_5215 iPseU_CNN:0.999629497528076;iRNA_PseU:0 5216 chr4 54265930 54265930 1 + G T UCEC 54265930 + 54265910 54265950 41 GAACTGGAAACTCAGAGAAAGAAACTGCCCTTCCATCTACA GAACTGGAAACTCAGAGAAATAAACTGCCCTTCCATCTACA Direct Gain 0 0.950454044896387 0 0.0200632214546204 prediction 0.900908089792774 Functional Gain - FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54265930 chr4:54265930 stopgain 0.994 1 21 hPsi_associated_SNPs_106256 0 0 1 0 1 Nucleus 0 0.438761198719383 0 0 hPsi_site_5216 iPseU_CNN:0;iRNA_PseU:0 5217 chr15 38243312 38243312 1 + C T SKCM 38243312 + 38243292 38243332 41 ATGTTTTTTCATGTAAGATTCATAAATCCAGATCTCCTCGT ATGTTTTTTCATGTAAGATTTATAAATCCAGATCTCCTCGT Direct Gain 0 0.950448270579027 0 0.898496270179749 prediction 0.900896541158055 Functional Gain - TMCO5A ENSG00000166069 CDS Human protein_coding chr15:38243312 chr15:38243312 synonymous SNV . 0 21 hPsi_associated_SNPs_106257 0 0 0 0 1 exosome 0 0.438718593931461 0.796992540359498 0 hPsi_site_5217 iPseU_CNN:0.796992540359498;iRNA_PseU:0 5218 chr2 95979554 95979554 1 + G A rs150250315 95979554 - 95979534 95979574 41 GGCGCTAGGTGGGGCCCTGGCTTCGTCCCATTCAGACCTCG GGCGCTAGGTGGGGCCCTGGTTTCGTCCCATTCAGACCTCG Direct Gain 0 0.950443866934375 0 0.999987959861755 prediction 0.900887733868751 Functional Gain - KCNIP3 ENSG00000115041 intronic Human protein_coding chr2:95979554 chr2:95979554 . . 0 21 hPsi_associated_SNPs_106258 0 0 0 0 0 Cytosol 0 0.438718592995102 0.99997591972351 0 hPsi_site_5218 iPseU_CNN:0.99997591972351;iRNA_PseU:0 5219 chr4 9784016 9784016 1 + C T SKCM 9784016 + 9783996 9784036 41 GTCTGGGTGGCCTTCGACATCATGTGCTCCACTGCCTCCAT GTCTGGGTGGCCTTCGACATTATGTGCTCCACTGCCTCCAT Direct Gain 0 0.950439129263405 0 0.999731779098511 prediction 0.90087825852681 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784016 chr4:9784016 synonymous SNV . 0 21 hPsi_associated_SNPs_106259 0 0 0 0 0 unknown 0 0.438723906503922 0.999463558197022 0 hPsi_site_5219 iPseU_CNN:0.999463558197022;iRNA_PseU:0 5220 chr10 24809131 24809131 1 + G A rs543294312 24809131 - 24809111 24809151 41 ACGCAGGAGGAAAGCCCCGTCTTCCACGTCTTTCAGAGTAA ACGCAGGAGGAAAGCCCCGTTTTCCACGTCTTTCAGAGTAA Direct Gain 0 0.950435905789951 0 0.948113679885864 prediction 0.900871811579902 Functional Gain - KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24809131 chr10:24809131 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_106260 0 0 0 0 0 Nucleus 0 0.438718836003783 0.896227359771728 0 hPsi_site_5220 iPseU_CNN:0.896227359771728;iRNA_PseU:0 5221 chr1 12030771 12030771 1 + C A OV 12030771 - 12030751 12030791 41 CCGATCTGGTTCATGTGGATGTCAATAGTCGGCACGTTCTC CCGATCTGGTTCATGTGGATTTCAATAGTCGGCACGTTCTC Direct Gain 0 0.950431179078529 0 0.999791860580444 prediction 0.900862358157058 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12030771 chr1:12030771 nonsynonymous SNV 0.991 5 21 hPsi_associated_SNPs_106261 0 0 0 0 0 Nucleus 0 0.438650330953934 0.999583721160888 0 hPsi_site_5221 iPseU_CNN:0.999583721160888;iRNA_PseU:0 5222 chr17 27001402 27001402 1 + G A BLCA 27001402 - 27001382 27001422 41 ATCACCAGAGTCACTGCCCTCATCCTCCTCCCCTTCATCTT ATCACCAGAGTCACTGCCCTTATCCTCCTCCCCTTCATCTT Direct Gain 0 0.950429163955919 0 0.985997676849365 prediction 0.900858327911839 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27001402 chr17:27001402 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106262 0 0 0 0 0 Cytosol 0 0.438718585375204 0.97199535369873 0 hPsi_site_5222 iPseU_CNN:0.97199535369873;iRNA_PseU:0 5223 chr18 13826533 13826533 1 + C T LUAD 13826533 + 13826513 13826553 41 GCTGGGCCCCGTTCTTCCTTCATCTCACTTTAATGCTTTCT GCTGGGCCCCGTTCTTCCTTTATCTCACTTTAATGCTTTCT Direct Gain 0 0.950426073796997 0 0.0525433719158173 prediction 0.900852147593994 Functional Gain - MC5R ENSG00000176136 CDS Human protein_coding chr18:13826533 chr18:13826533 nonsynonymous SNV 0.096 4 21 hPsi_associated_SNPs_106263 0 0 0 0 0 unknown 0 0.438718592995066 0 0 hPsi_site_5223 iPseU_CNN:0;iRNA_PseU:0 5224 chr7 100086968 100086968 1 + G T THCA 100086968 + 100086948 100086988 41 ACAGCCTTCCGGACCCAACTGTAGGCCCCCTGACCCCGCTG ACAGCCTTCCGGACCCAACTTTAGGCCCCCTGACCCCGCTG Direct Gain 0 0.950423078087742 0 0.995364308357239 prediction 0.900846156175484 Functional Gain - NYAP1 ENSG00000166924 CDS Human protein_coding chr7:100086968 chr7:100086968 nonsynonymous SNV 0.889 1 21 hPsi_associated_SNPs_106264 0 0 0 0 0 nucleolus 0 0.438718592961072 0.990728616714478 0 hPsi_site_5224 iPseU_CNN:0.990728616714478;iRNA_PseU:0 5225 chr5 138266310 138266310 1 + G A STAD 138266310 - 138266290 138266330 41 TCATCTCCATCATAATCATGCACATCTGCTTGGCCAGCACA TCATCTCCATCATAATCATGTACATCTGCTTGGCCAGCACA Direct Gain 0 0.950406505488498 0 0.999974489212036 prediction 0.900813010976997 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138266310 chr5:138266310 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106265 0 0 0 0 0 Nucleus 0 0.440871880287706 0.999948978424072 0 hPsi_site_5225 iPseU_CNN:0.999948978424072;iRNA_PseU:0 5226 chr2 85598640 85598640 1 + G A rs116470781 85598640 - 85598620 85598660 41 GTTTCCATGAAGGGCACAGTCAAACTTGGAGCCGGTCAGCT GTTTCCATGAAGGGCACAGTTAAACTTGGAGCCGGTCAGCT Direct Gain 0 0.950399238502134 0 0.996400117874146 prediction 0.900798477004267 Functional Gain - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85598640 chr2:85598640 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_106266 0 0 0 0 0 Cytosol 0 0.438718592995101 0.992800235748292 0 hPsi_site_5226 iPseU_CNN:0.992800235748292;iRNA_PseU:0 5227 chr1 171118840 171118840 1 + G A rs2272797 171118840 - 171118820 171118860 41 CCACGTGTTCATCTTCTGGACATATAACCAGTCAGAGATGA CCACGTGTTCATCTTCTGGATATATAACCAGTCAGAGATGA Direct Gain 0 0.950397242939182 0 0.98132050037384 prediction 0.900794485878365 Functional Gain - FMO6P ENSG00000117507 CDS Human transcribed_unitary_pseudogene chr1:171118840 chr1:171118840 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_106267 0 0 0 0 0 unknown 0 0.438565490549152 0.96264100074768 0 hPsi_site_5227 iPseU_CNN:0.96264100074768;iRNA_PseU:0 5228 chr4 169099059 169099059 1 + C A GBM 169099059 - 169099039 169099079 41 GTGCTCCCCCGTCTTCTGCTGACAGGCTTCCCATAGGACCT GTGCTCCCCCGTCTTCTGCTTACAGGCTTCCCATAGGACCT Direct Gain 0 0.950396802764106 0 0.999980270862579 prediction 0.900793605528212 Functional Gain - ANXA10 ENSG00000109511 CDS Human protein_coding chr4:169099059 chr4:169099059 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106268 0 0 0 0 0 exosome 0 0.438719029458712 0.999960541725158 0 hPsi_site_5228 iPseU_CNN:0.999960541725158;iRNA_PseU:0 5229 chr17 32964393 32964393 1 + C A GBM 32964393 - 32964373 32964413 41 GTTTTCTGGCAGCTCTCAGCGATGGTTAGCTCTGCGCGAAG GTTTTCTGGCAGCTCTCAGCTATGGTTAGCTCTGCGCGAAG Direct Gain 0 0.950396720228191 0 0.937139749526978 prediction 0.900793440456382 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32964393 chr17:32964393 synonymous SNV . 0 21 hPsi_associated_SNPs_106269 0 0 0 0 0 exosome 0 0.438718279065277 0.874279499053956 0 hPsi_site_5229 iPseU_CNN:0.874279499053956;iRNA_PseU:0 5230 chr1 1396133 1396133 1 + C T SKCM 1396133 + 1396113 1396153 41 CCATCCCCGCCCCGCAGATTCATGCTGATCCTGGCCAGCTG CCATCCCCGCCCCGCAGATTTATGCTGATCCTGGCCAGCTG Direct Gain 0 0.950391569037494 0 0.0793339610099792 prediction 0.900783138074988 Functional Gain - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1396133 chr1:1396133 synonymous SNV . 0 21 hPsi_associated_SNPs_106270 0 0 0 0 1 Nucleus 0 0.438658319889211 0 0 hPsi_site_5230 iPseU_CNN:0;iRNA_PseU:0 5231 chr1 32049095 32049095 1 + C T COAD 32049095 + 32049075 32049115 41 AACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGGCAT AACCACAGCGCCTTCTGGGGTATGACCCTGGATGAGGGCAT Direct Gain 0 0.950389660384219 0 0.124959915876389 prediction 0.900779320768439 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32049095 chr1:32049095 synonymous SNV . 0 21 hPsi_associated_SNPs_106271 0 0 1 0 2 Ribosome 0 0.438718532660863 0 0 hPsi_site_5231 iPseU_CNN:0;iRNA_PseU:0 5232 chr14 75537379 75537379 1 + T A OV 75537379 - 75537359 75537399 41 GGAAGAGTCACCTTGTTCGTAAGAGTCTTGCTTGGCTGAGT GGAAGAGTCACCTTGTTCGTTAGAGTCTTGCTTGGCTGAGT Direct Gain 0 0.950388517507746 0 0.999784708023071 prediction 0.900777035015492 Functional Gain - ZC2HC1C ENSG00000119703 CDS Human protein_coding chr14:75537379 chr14:75537379 nonsynonymous SNV 0.915 1 21 hPsi_associated_SNPs_106272 0 0 0 0 0 exosome 0 0.438718431765708 0.999569416046142 0 hPsi_site_5232 iPseU_CNN:0.999569416046142;iRNA_PseU:0 5233 chr18 42530198 42530198 1 + C T BLCA 42530198 + 42530178 42530218 41 ATCCCCAAGCAGCCACAGCTCACCAGCCCCACCCAGCAGCT ATCCCCAAGCAGCCACAGCTTACCAGCCCCACCCAGCAGCT Direct Gain 0 0.950377964243274 0 0.0498327910900116 prediction 0.900755928486549 Functional Gain - SETBP1 ENSG00000152217 CDS Human protein_coding chr18:42530198 chr18:42530198 nonsynonymous SNV 0.067 1 21 hPsi_associated_SNPs_106273 0 0 0 0 0 nucleus 0 0.438718910221726 0 0 hPsi_site_5233 iPseU_CNN:0;iRNA_PseU:0 5234 chr9 103204612 103204612 1 + A T UCEC 103204612 + 103204592 103204632 41 CCCCCCGGAGGAGGAGCCCGAATACCACCCCGACGCCTCAG CCCCCCGGAGGAGGAGCCCGTATACCACCCCGACGCCTCAG Direct Gain 0 0.95037331732616 0 0.99868643283844 prediction 0.90074663465232 Functional Gain - MSANTD3;MSANTD3-TMEFF1 ENSG00000066697;ENSG00000241697;ENSG00000251349 CDS Human other chr9:103204612 chr9:103204612 nonsynonymous SNV 0.984 0 21 hPsi_associated_SNPs_106274 0 0 1 0 1 unknown 0 0.439038414529852 0.99737286567688 0 hPsi_site_5234 iPseU_CNN:0.99737286567688;iRNA_PseU:0 5235 chr11 118376449 118376449 1 + C A UCEC 118376449 - 118376429 118376469 41 TGTTGGGGACAGTTCGGTGAGATGAAGTATTAAGTGACCCC TGTTGGGGACAGTTCGGTGATATGAAGTATTAAGTGACCCC Direct Gain 0 0.95036626193344 0 0.70475697517395 prediction 0.90073252386688 Functional Gain - KMT2A ENSG00000118058 CDS Human protein_coding chr11:118376449 chr11:118376449 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106275 0 0 0 0 0 Cytosol 0 0.438718587159169 0.4095139503479 0 hPsi_site_5235 iPseU_CNN:0.4095139503479;iRNA_PseU:0 5236 chr22 50922682 50922682 1 + G A rs114516558 50922682 - 50922662 50922702 41 GCACGGAGGCCTCCACAGGGCAGGACCAGCCTGGACCGTTC GCACGGAGGCCTCCACAGGGTAGGACCAGCCTGGACCGTTC Direct Gain 0 0.950365579919774 0 0.0448546409606934 prediction 0.900731159839548 Functional Gain - ADM2 ENSG00000128165 UTR3 Human protein_coding chr22:50922682 chr22:50922682 . . 0 21 hPsi_associated_SNPs_106276 0 0 0 0 0 nucleolus 0 0.438718592916481 0 0 hPsi_site_5236 iPseU_CNN:0;iRNA_PseU:0 5237 chr16 30977308 30977308 1 + C T LUAD 30977308 + 30977288 30977328 41 GGCAAGGGATTGATTGCCGCCTCAGCTGGCCCCCCCGGTGG GGCAAGGGATTGATTGCCGCTTCAGCTGGCCCCCCCGGTGG Direct Gain 0 0.950363476053564 0 0.263264894485474 prediction 0.900726952107129 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30977308 chr16:30977308 synonymous SNV . 0 21 hPsi_associated_SNPs_106277 0 0 1 0 0 Cytosol 0 0.438579432192876 0 0 hPsi_site_5237 iPseU_CNN:0;iRNA_PseU:0 5238 chr17 2938025 2938025 1 + C T rs143140849 2938025 + 2938005 2938045 41 AGCCAGCTCACCTCCAAGGACATCCCCTCCTGGCTTCTCCC AGCCAGCTCACCTCCAAGGATATCCCCTCCTGGCTTCTCCC Direct Gain 0 0.950357908993188 0 0.940240621566772 prediction 0.900715817986375 Functional Gain - RAP1GAP2 ENSG00000132359 UTR3 Human protein_coding chr17:2938025 chr17:2938025 . . 0 21 hPsi_associated_SNPs_106278 0 0 1 0 0 Ribosome 0 0.438757446152365 0.880481243133544 0 hPsi_site_5238 iPseU_CNN:0.880481243133544;iRNA_PseU:0 5239 chr11 1273643 1273643 1 + C T UCEC 1273643 + 1273623 1273663 41 GTGTGCAATCAGCACTGTGACATTGACCGCTTCCAGGGCGC GTGTGCAATCAGCACTGTGATATTGACCGCTTCCAGGGCGC Direct Gain 0 0.950355783079906 0 0.996241927146912 prediction 0.900711566159812 Functional Gain - MUC5B ENSG00000117983 CDS Human protein_coding chr11:1273643 chr11:1273643 synonymous SNV . 0 21 hPsi_associated_SNPs_106279 0 0 0 0 1 Endoplasmic reticulum 0 0.438284541765188 0.992483854293824 0 hPsi_site_5239 iPseU_CNN:0.992483854293824;iRNA_PseU:0 5240 chr2 97427634 97427634 1 + G A HNSC 97427634 - 97427614 97427654 41 GGTGAGAAGGATGGTGTTGGCACCCACAGCCAGCCCATGTC GGTGAGAAGGATGGTGTTGGTACCCACAGCCAGCCCATGTC Direct Gain 0 0.950350107605529 0 0.999765396118164 prediction 0.900700215211057 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97427634 chr2:97427634 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_106280 0 0 0 0 0 chromatin 0 0.438718592995102 0.999530792236328 0 hPsi_site_5240 iPseU_CNN:0.999530792236328;iRNA_PseU:0 5241 chr10 125447644 125447644 1 + C A LUSC 125447644 - 125447624 125447664 41 CGGCAGAATGTTCTGGCTGTGAGAGTCGCCTGTGAGGCCAG CGGCAGAATGTTCTGGCTGTTAGAGTCGCCTGTGAGGCCAG Direct Gain 0 0.950338773183045 0 0.999977231025696 prediction 0.90067754636609 Functional Gain - GPR26 ENSG00000154478 CDS Human protein_coding chr10:125447644 chr10:125447644 nonsynonymous SNV 0.989 0 21 hPsi_associated_SNPs_106281 0 0 0 0 0 exosome 0 0.438713351739179 0.999954462051392 0 hPsi_site_5241 iPseU_CNN:0.999954462051392;iRNA_PseU:0 5242 chr17 16285578 16285578 1 + C T rs551926346 16285578 + 16285558 16285598 41 CCTCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCT CCTCCCGACCAGCAGAGGCTTATCTTTGCAGGCAAGCAGCT Direct Gain 0 0.95033809506428 0 0.00759565830230713 prediction 0.90067619012856 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285578 chr17:16285578 synonymous SNV . 0 21 hPsi_associated_SNPs_106282 0 0 1 0 0 Ribosome 0 0.438718592995084 0 0 hPsi_site_5242 iPseU_CNN:0;iRNA_PseU:0 5243 chr16 20803437 20803437 1 + C T rs5711 20803437 + 20803417 20803457 41 GTTGCAAGAGCAGATGATGTCATATTATCCTCTGGGTAACT GTTGCAAGAGCAGATGATGTTATATTATCCTCTGGGTAACT Direct Gain 0 0.950336274487096 0 0.2661092877388 prediction 0.900672548974193 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20803437 chr16:20803437 synonymous SNV . 0 21 hPsi_associated_SNPs_106283 0 0 1 0 1 Endoplasmic reticulum 0 0.440568912793844 0 0 hPsi_site_5243 iPseU_CNN:0;iRNA_PseU:0 5244 chr9 114691897 114691897 1 + C T LGG 114691897 + 114691877 114691917 41 TGTTGGATCAAGCAGGAGGACTTATAGCTTTTGCTCAGTAC TGTTGGATCAAGCAGGAGGATTTATAGCTTTTGCTCAGTAC Direct Gain 0 0.950332737975495 0 0.0356221795082092 prediction 0.90066547595099 Functional Gain - UGCG ENSG00000148154 CDS Human protein_coding chr9:114691897 chr9:114691897 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_106284 0 0 1 0 1 Ribosome 0 0.43872765181074 0 0 hPsi_site_5244 iPseU_CNN:0;iRNA_PseU:0 5245 chrX 57622882 57622882 1 + C A rs752436637 57622882 - 57622862 57622902 41 AACGAGACACAAATTGTGAAGATGTTCCCCAAATTGCAAAA AACGAGACACAAATTGTGAATATGTTCCCCAAATTGCAAAA Direct Gain 0 0.950331502902002 0 0.421448320150375 prediction 0.900663005804004 Functional Gain - ZXDB ENSG00000198455 UTR3 Human protein_coding chrX:57622882 chrX:57622882 . . 0 21 hPsi_associated_SNPs_106285 0 0 0 0 0 Cytosol 0 0.438706086098428 0 0 hPsi_site_5245 iPseU_CNN:0;iRNA_PseU:0 5246 chr2 36704129 36704129 1 + T A rs6730889 36704129 - 36704109 36704149 41 TGGGCGGTGAAGCAGATGGCAACGCCCCCTTGGCATCGACA TGGGCGGTGAAGCAGATGGCTACGCCCCCTTGGCATCGACA Direct Gain 0 0.950331244067295 0 0.999930143356323 prediction 0.90066248813459 Functional Gain - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36704129 chr2:36704129 synonymous SNV . 0 21 hPsi_associated_SNPs_106286 0 0 0 0 0 Nucleus 0 0.438718104791425 0.999860286712646 0 hPsi_site_5246 iPseU_CNN:0.999860286712646;iRNA_PseU:0 5247 chr8 145616824 145616824 1 + G A BLCA 145616824 - 145616804 145616844 41 CAGCGCTCTGCGTTGCGGCCCTCATTCTCGAAGTCCAGCTC CAGCGCTCTGCGTTGCGGCCTTCATTCTCGAAGTCCAGCTC Direct Gain 0 0.950326620186389 0 0.999494135379791 prediction 0.900653240372779 Functional Gain - ADCK5 ENSG00000173137 CDS Human protein_coding chr8:145616824 chr8:145616824 synonymous SNV . 0 21 hPsi_associated_SNPs_106287 0 0 0 0 0 chromatin 0 0.440222743814563 0.998988270759582 0 hPsi_site_5247 iPseU_CNN:0.998988270759582;iRNA_PseU:0 5248 chr18 44030268 44030268 1 + G A SKCM 44030268 - 44030248 44030288 41 GTAAGGGTAGTTTCGGATTTCATGGACGACCTGTTGGGTAG GTAAGGGTAGTTTCGGATTTTATGGACGACCTGTTGGGTAG Direct Gain 0 0.950326557734607 0 0.102311313152313 prediction 0.900653115469213 Functional Gain - RNF165 ENSG00000141622 CDS Human protein_coding chr18:44030268 chr18:44030268 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106288 0 0 0 0 0 nucleus 0 0.438718592995303 0 0 hPsi_site_5248 iPseU_CNN:0;iRNA_PseU:0 5249 chr12 6929912 6929912 1 + G A rs28990971 6929912 - 6929892 6929932 41 GAGCAGGGGTGGAGAGTGGGCACAAATGCAAAGTAAGCAAA GAGCAGGGGTGGAGAGTGGGTACAAATGCAAAGTAAGCAAA Direct Gain 0 0.950323451215203 0 0.499170452356339 prediction 0.900646902430406 Functional Gain - CD4 ENSG00000010610 UTR3 Human protein_coding chr12:6929912 chr12:6929912 . . 0 21 hPsi_associated_SNPs_106289 0 0 1 0 0 Endoplasmic reticulum 0 0.438758949682085 0 0 hPsi_site_5249 iPseU_CNN:0;iRNA_PseU:0 5250 chr5 908553 908553 1 + G A BLCA 908553 - 908533 908573 41 TTAATCTGATCAATTTGGGTCAAGACAGCATTGACCACGCG TTAATCTGATCAATTTGGGTTAAGACAGCATTGACCACGCG Direct Gain 0 0.950323097608922 0 0.7976233959198 prediction 0.900646195217843 Functional Gain - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908553 chr5:908553 synonymous SNV . 0 21 hPsi_associated_SNPs_106290 0 0 0 0 0 Ribosome 0 0.438769335666523 0.5952467918396 0 hPsi_site_5250 iPseU_CNN:0.5952467918396;iRNA_PseU:0 5251 chr17 43922395 43922395 1 + G T LUSC 43922395 + 43922375 43922415 41 AGCAAGGACTACTGTATCCTGTTCAGCTCCGACTACATCAC AGCAAGGACTACTGTATCCTTTTCAGCTCCGACTACATCAC Direct Gain 0 0.950319058901619 0 0.997201025485992 prediction 0.900638117803237 Functional Gain - SPPL2C ENSG00000185294 CDS Human protein_coding chr17:43922395 chr17:43922395 synonymous SNV . 0 21 hPsi_associated_SNPs_106291 0 0 0 0 0 unknown 0 0.438742974697948 0.994402050971984 0 hPsi_site_5251 iPseU_CNN:0.994402050971984;iRNA_PseU:0 5252 chr11 77775098 77775098 1 + C T LGG 77775098 + 77775078 77775118 41 GCTGAGGCCCCTGATCTCTACACCTACTTCACCATGCTCAA GCTGAGGCCCCTGATCTCTATACCTACTTCACCATGCTCAA Direct Gain 0 0.950316888777544 0 0.999890983104706 prediction 0.900633777555089 Functional Gain - THRSP ENSG00000151365 CDS Human protein_coding chr11:77775098 chr11:77775098 synonymous SNV . 0 21 hPsi_associated_SNPs_106292 0 0 0 0 0 nucleolus 0 0.438718657357093 0.999781966209412 0 hPsi_site_5252 iPseU_CNN:0.999781966209412;iRNA_PseU:0 5253 chr1 151491553 151491553 1 + C A STAD 151491553 - 151491533 151491573 41 GCCTGGCCTCCAAGTTGACTGTCAAACTTGTTGATGAGTGA GCCTGGCCTCCAAGTTGACTTTCAAACTTGTTGATGAGTGA Direct Gain 0 0.950315004243387 0 0.99328875541687 prediction 0.900630008486773 Functional Gain - CGN ENSG00000143375 CDS Human protein_coding chr1:151491553 chr1:151491553 nonsynonymous SNV 0.275 1 21 hPsi_associated_SNPs_106293 0 0 0 0 0 exosome 0 0.43875363443146 0.98657751083374 0 hPsi_site_5253 iPseU_CNN:0.98657751083374;iRNA_PseU:0 5254 chr17 11687676 11687676 1 + C T rs565534235 11687676 + 11687656 11687696 41 GATGCCCTGTCCTCTATCTACAGCATCATCCTCACTCAGCA GATGCCCTGTCCTCTATCTATAGCATCATCCTCACTCAGCA Direct Gain 0 0.950314670995617 0 0.940660715103149 prediction 0.900629341991234 Functional Gain - DNAH9 ENSG00000007174 CDS Human protein_coding chr17:11687676 chr17:11687676 synonymous SNV . 0 21 hPsi_associated_SNPs_106294 0 0 0 0 0 exosome 0 0.438717670793052 0.881321430206298 0 hPsi_site_5254 iPseU_CNN:0.881321430206298;iRNA_PseU:0 5255 chr17 46923425 46923425 1 + C T rs575635330 46923425 + 46923405 46923445 41 AATCAGACTATTCAACTCCTCATCACCCCAGACACTGGTAG AATCAGACTATTCAACTCCTTATCACCCCAGACACTGGTAG Direct Gain 0 0.950312251089572 0 0.488363802433014 prediction 0.900624502179145 Functional Gain - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46923425 chr17:46923425 synonymous SNV . 0 21 hPsi_associated_SNPs_106295 0 0 1 0 1 Ribosome 0 0.438877949277608 0 0 hPsi_site_5255 iPseU_CNN:0;iRNA_PseU:0 5256 chr19 57802270 57802270 1 + A T UCEC 57802270 + 57802250 57802290 41 AGAGTGAGAAACTCCATGGGAAAATGAGCCTTGAACACGAA AGAGTGAGAAACTCCATGGGTAAATGAGCCTTGAACACGAA Direct Gain 0 0.950311771835715 0 0.998824119567871 prediction 0.90062354367143 Functional Gain - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802270 chr19:57802270 stopgain 0.003 0 21 hPsi_associated_SNPs_106296 0 0 1 0 0 Nucleus 0 0.438723882100309 0.997648239135742 0 hPsi_site_5256 iPseU_CNN:0.997648239135742;iRNA_PseU:0 5257 chr5 135399373 135399373 1 + G A rs7854 135399373 - 135399353 135399393 41 AGCCACGTGTAGATGTGAGACACATTTGACAGAACATTTCA AGCCACGTGTAGATGTGAGATACATTTGACAGAACATTTCA Direct Gain 0 0.950307387309028 0 0.920715570449829 prediction 0.900614774618055 Functional Gain - TGFBI ENSG00000120708 UTR3 Human protein_coding chr5:135399373 chr5:135399373 . . 0 21 hPsi_associated_SNPs_106297 1 0 0 0 0 Endoplasmic reticulum 0 0.429929696773291 0.841431140899658 0 hPsi_site_5257 iPseU_CNN:0.841431140899658;iRNA_PseU:0 5258 chr3 19575503 19575503 1 + C A LUSC 19575503 - 19575483 19575523 41 CCAAAGGTTTTGTAGAAGCTGATGCCATTCCTTCCTGGTTC CCAAAGGTTTTGTAGAAGCTTATGCCATTCCTTCCTGGTTC Direct Gain 0 0.950301631454925 0 0.0512067377567291 prediction 0.90060326290985 Functional Gain - KCNH8 ENSG00000183960 CDS Human protein_coding chr3:19575503 chr3:19575503 stopgain 0.008 0 21 hPsi_associated_SNPs_106298 0 0 0 0 0 exosome 0 0.43871683830788 0 0 hPsi_site_5258 iPseU_CNN:0;iRNA_PseU:0 5259 chr10 135195045 135195045 1 + C A HNSC 135195045 - 135195025 135195065 41 TGGAAGGACCCGTTCCAGTGGATGGTCTTCACAGGCTTCTC TGGAAGGACCCGTTCCAGTGTATGGTCTTCACAGGCTTCTC Direct Gain 0 0.950298048478276 0 0.999701321125031 prediction 0.900596096956553 Functional Gain - PAOX ENSG00000148832 CDS Human protein_coding chr10:135195045 chr10:135195045 synonymous SNV . 0 21 hPsi_associated_SNPs_106299 0 0 0 0 0 exosome 0 0.438718579789998 0.999402642250062 0 hPsi_site_5259 iPseU_CNN:0.999402642250062;iRNA_PseU:0 5260 chr16 68057103 68057103 1 + C T COAD 68057103 + 68057083 68057123 41 CGCACCGGCCGCGTTAGAGCCATGTTTCCCTTAGTGCGGGA CGCACCGGCCGCGTTAGAGCTATGTTTCCCTTAGTGCGGGA Direct Gain 0 0.950290762109139 0 0.985983073711395 prediction 0.900581524218278 Functional Gain - DDX28 ENSG00000182810 CDS Human protein_coding chr16:68057103 chr16:68057103 nonsynonymous SNV 0.085 1 21 hPsi_associated_SNPs_106300 0 0 0 0 0 Ribosome 0 0.438713132503552 0.97196614742279 0 hPsi_site_5260 iPseU_CNN:0.97196614742279;iRNA_PseU:0 5261 chr2 183616459 183616459 1 + C T HNSC 183616459 + 183616439 183616479 41 ATGTTACCACGCTTGGACCTCAAAATTTTCCTGCCAATGAC ATGTTACCACGCTTGGACCTTAAAATTTTCCTGCCAATGAC Direct Gain 0 0.950281235677527 0 0.967140316963196 prediction 0.900562471355054 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183616459 chr2:183616459 stopgain 1.000 1 21 hPsi_associated_SNPs_106301 0 0 1 1 2 Ribosome 0 0.438725463012347 0.934280633926392 0 hPsi_site_5261 iPseU_CNN:0.934280633926392;iRNA_PseU:0 5262 chr16 4745156 4745156 1 + G T UCEC 4745156 + 4745136 4745176 41 AAGCAGAAGAAGGCCCTGGAGAAGTTGCTCCCGGCCTCCTC AAGCAGAAGAAGGCCCTGGATAAGTTGCTCCCGGCCTCCTC Direct Gain 0 0.950280769265703 0 0.994819343090057 prediction 0.900561538531407 Functional Gain - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4745156 chr16:4745156 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_106302 0 0 0 0 0 Ribosome 0 0.442145353034876 0.989638686180114 0 hPsi_site_5262 iPseU_CNN:0.989638686180114;iRNA_PseU:0 5263 chr6 28333556 28333556 1 + G A BLCA 28333556 - 28333536 28333576 41 CTTACCACATTCTTCACACTCATATGGCTTCTCACCAGTGT CTTACCACATTCTTCACACTTATATGGCTTCTCACCAGTGT Direct Gain 0 0.950280222833561 0 0.999337315559387 prediction 0.900560445667121 Functional Gain - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28333556 chr6:28333556 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_106303 0 0 0 0 0 exosome 0 0.440293018763901 0.998674631118774 0 hPsi_site_5263 iPseU_CNN:0.998674631118774;iRNA_PseU:0 5264 chr7 128478760 128478760 1 + C T LGG 128478760 + 128478740 128478780 41 GGTGACAGCACGTTCCGCTGCACATACAGACCTGCCATGGA GGTGACAGCACGTTCCGCTGTACATACAGACCTGCCATGGA Direct Gain 0 0.950280218268013 0 0.999950289726257 prediction 0.900560436536026 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128478760 chr7:128478760 synonymous SNV . 0 21 hPsi_associated_SNPs_106304 0 0 1 0 1 chromatin 0 0.438151503753296 0.999900579452514 0 hPsi_site_5264 iPseU_CNN:0.999900579452514;iRNA_PseU:0 5265 chr9 36150898 36150898 1 + G A COAD 36150898 - 36150878 36150918 41 GAAGTTATAGTTCTTGATTTCACTGTACCATCTATCAGCCA GAAGTTATAGTTCTTGATTTTACTGTACCATCTATCAGCCA Direct Gain 0 0.950279986591471 0 0.939316034317017 prediction 0.900559973182941 Functional Gain - GLIPR2 ENSG00000122694 CDS Human protein_coding chr9:36150898 chr9:36150898 nonsynonymous SNV 0.984 4 21 hPsi_associated_SNPs_106305 0 0 0 0 0 Ribosome 0 0.438720478367439 0.878632068634034 0 hPsi_site_5265 iPseU_CNN:0.878632068634034;iRNA_PseU:0 5266 chr19 12015485 12015485 1 + C A OV 12015485 - 12015465 12015505 41 CTGTCATCTTTAATTTCATTGACTTTCTTTTCTATGAGACT CTGTCATCTTTAATTTCATTTACTTTCTTTTCTATGAGACT Direct Gain 0 0.950274747683314 0 0.0784712731838226 prediction 0.900549495366628 Functional Gain - ZNF69 ENSG00000198429 CDS Human protein_coding chr19:12015485 chr19:12015485 synonymous SNV . 0 21 hPsi_associated_SNPs_106306 0 0 0 0 0 Nucleus 0 0.44282708527415 0 0 hPsi_site_5266 iPseU_CNN:0;iRNA_PseU:0 5267 chr20 8626822 8626822 1 + A T rs45496299 8626822 + 8626802 8626842 41 GTCCAGGGATGCATTTCTGGAAAAAGCGTAAGTCACTCTAA GTCCAGGGATGCATTTCTGGTAAAAGCGTAAGTCACTCTAA Direct Gain 0 0.950273019420872 0 0.983263969421387 prediction 0.900546038841743 Functional Gain - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8626822 chr20:8626822 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106307 2 0 1 0 1 Nucleus 0 0.438727010746158 0.966527938842774 0 hPsi_site_5267 iPseU_CNN:0.966527938842774;iRNA_PseU:0 5268 chr17 7128139 7128139 1 + C A SKCM 7128139 - 7128119 7128159 41 TGGGGTGGCCCTCACTCAGGGATCTTGAGGCCCTGGCAGGA TGGGGTGGCCCTCACTCAGGTATCTTGAGGCCCTGGCAGGA Direct Gain 0 0.950268592929079 0 0.896957874298096 prediction 0.900537185858158 Functional Gain - ACADVL ENSG00000072778 CDS Human protein_coding chr17:7128139 chr17:7128139 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_106308 0 0 0 0 0 Endoplasmic reticulum 0 0.438718396621406 0.793915748596192 0 hPsi_site_5268 iPseU_CNN:0.793915748596192;iRNA_PseU:0 5269 chr20 5166418 5166418 1 + G A rs3818196 5166418 - 5166398 5166438 41 CCAATGAAGCCTTCCCAGGTCTTCTTCGGGGACAGCTGTGG CCAATGAAGCCTTCCCAGGTTTTCTTCGGGGACAGCTGTGG Direct Gain 0 0.950256907226478 0 0.880371451377869 prediction 0.900513814452956 Functional Gain - CDS2 ENSG00000101290 CDS Human protein_coding chr20:5166418 chr20:5166418 synonymous SNV . 0 21 hPsi_associated_SNPs_106309 0 0 0 0 0 chromatin 0 0.43871859298934 0.760742902755738 0 hPsi_site_5269 iPseU_CNN:0.760742902755738;iRNA_PseU:0 5270 chr9 133327703 133327703 1 + G A UCEC 133327703 - 133327683 133327723 41 CACCAGATAGGCAATGACGTCATAGCCTTGTTCCTTCAGCC CACCAGATAGGCAATGACGTTATAGCCTTGTTCCTTCAGCC Direct Gain 0 0.950255928037197 0 0.936386823654175 prediction 0.900511856074394 Functional Gain - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133327703 chr9:133327703 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_106310 0 0 0 0 0 Ribosome 0 0.438718584386568 0.87277364730835 0 hPsi_site_5270 iPseU_CNN:0.87277364730835;iRNA_PseU:0 5271 chr2 99992890 99992890 1 + G A UCEC 99992890 - 99992870 99992910 41 CTCCTCTTCTTCACTTTCTTCATCTTCTTCTTCCTCTTCTT CTCCTCTTCTTCACTTTCTTTATCTTCTTCTTCCTCTTCTT Direct Gain 0 0.950252445126455 0 0.995893836021423 prediction 0.900504890252911 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99992890 chr2:99992890 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_106311 0 0 0 0 0 Ribosome 0 0.438719040995226 0.991787672042846 0 hPsi_site_5271 iPseU_CNN:0.991787672042846;iRNA_PseU:0 5272 chr11 1619152 1619152 1 + G A UCEC 1619152 - 1619132 1619172 41 TTCCAAGGGGGGCTGTGGTTCTTGTGGCTGCTCCCAGTCCA TTCCAAGGGGGGCTGTGGTTTTTGTGGCTGCTCCCAGTCCA Direct Gain 0 0.95025155796535 0 0.998377442359924 prediction 0.9005031159307 Functional Gain - KRTAP5-2 ENSG00000205867 CDS Human protein_coding chr11:1619152 chr11:1619152 nonsynonymous SNV 0.119 0 21 hPsi_associated_SNPs_106312 0 0 0 0 0 exosome 0 0.438718592995102 0.996754884719848 0 hPsi_site_5272 iPseU_CNN:0.996754884719848;iRNA_PseU:0 5273 chr2 216964737 216964737 1 + C T LUSC 216964737 + 216964717 216964757 41 CAGATGGTGGACATCCATGTCACATTGACAGAGAAAGAGCT CAGATGGTGGACATCCATGTTACATTGACAGAGAAAGAGCT Direct Gain 0 0.950246926786857 0 0.999878406524658 prediction 0.900493853573714 Functional Gain - TMEM169 ENSG00000163449 CDS Human protein_coding chr2:216964737 chr2:216964737 synonymous SNV . 0 21 hPsi_associated_SNPs_106313 0 0 0 0 1 Nucleus 0 0.438718369519911 0.999756813049316 0 hPsi_site_5273 iPseU_CNN:0.999756813049316;iRNA_PseU:0 5274 chr14 23845080 23845080 1 + G A COAD 23845080 - 23845060 23845100 41 AGCAGGTCCGGCTAGCCCATCACACGGGGCCGCACACACAC AGCAGGTCCGGCTAGCCCATTACACGGGGCCGCACACACAC Direct Gain 0 0.95024048565397 0 0.998137712478638 prediction 0.900480971307941 Functional Gain - IL25 ENSG00000166090 CDS Human protein_coding chr14:23845080 chr14:23845080 synonymous SNV . 0 21 hPsi_associated_SNPs_106314 0 0 0 0 0 exosome 0 0.438718939630238 0.996275424957276 0 hPsi_site_5274 iPseU_CNN:0.996275424957276;iRNA_PseU:0 5275 chr14 58832826 58832826 1 + C T SKCM 58832826 + 58832806 58832846 41 GCATCTTAATGTATCTAAGCCACAGAAACTTGCACGATCTC GCATCTTAATGTATCTAAGCTACAGAAACTTGCACGATCTC Direct Gain 0 0.950238554989274 0 0.964116513729095 prediction 0.900477109978547 Functional Gain - ARID4A ENSG00000032219 CDS Human protein_coding chr14:58832826 chr14:58832826 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_106315 0 0 1 0 1 chromatin 0 0.438751953914963 0.92823302745819 0 hPsi_site_5275 iPseU_CNN:0.92823302745819;iRNA_PseU:0 5276 chr15 82386571 82386571 1 + C A rs140079569 82386571 - 82386551 82386591 41 GAAGATTCATTCTTACCATAGATCTTAGCAACCTCAGCATA GAAGATTCATTCTTACCATATATCTTAGCAACCTCAGCATA Direct Gain 0 0.950237501351143 0 0.999999701976776 prediction 0.900475002702285 Functional Gain - LINC01583 ENSG00000259518 intronic Human lincRNA chr15:82386571 chr15:82386571 . . 0 21 hPsi_associated_SNPs_106316 0 0 0 0 0 unknown 0 0.43871870607015 0.999999403953552 0 hPsi_site_5276 iPseU_CNN:0.999999403953552;iRNA_PseU:0 5277 chr19 55341628 55341628 1 + C A LUSC 55341628 - 55341608 55341648 41 GGCCTCTGAGAAGGGCGAGTGATTTTTCTCTGTGTGAAAAC GGCCTCTGAGAAGGGCGAGTTATTTTTCTCTGTGTGAAAAC Direct Gain 0 0.950233099805662 0 0.961921155452728 prediction 0.900466199611325 Functional Gain - KIR3DL1 ENSG00000167633 CDS Human protein_coding chr19:55341628 chr19:55341628 synonymous SNV . 0 21 hPsi_associated_SNPs_106317 0 0 0 0 0 exosome 0 0.438720651534711 0.923842310905456 0 hPsi_site_5277 iPseU_CNN:0.923842310905456;iRNA_PseU:0 5278 chr5 32789537 32789537 1 + C A OV 32789537 - 32789517 32789557 41 CAAGTTGATGGTTCTTCAGAGAAATGTGATGTTTTCAGGGA CAAGTTGATGGTTCTTCAGATAAATGTGATGTTTTCAGGGA Direct Gain 0 0.95022493931784 0 0.999065637588501 prediction 0.900449878635681 Functional Gain - NPR3 ENSG00000181495 CDS Human other chr5:32789537 chr5:32789537 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106318 0 0 0 0 0 nucleoplasm 0 0.4387440698909 0.998131275177002 0 hPsi_site_5278 iPseU_CNN:0.998131275177002;iRNA_PseU:0 5279 chr8 143558763 143558763 1 + G A CESC 143558763 - 143558743 143558783 41 GAGGCTCCAGGGCGACCACTCATCCCAGGCACCATGCACTG GAGGCTCCAGGGCGACCACTTATCCCAGGCACCATGCACTG Direct Gain 0 0.950224294233171 0 0.999999761581421 prediction 0.900448588466341 Functional Gain - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143558763 chr8:143558763 nonsynonymous SNV 0.981 2 21 hPsi_associated_SNPs_106319 0 0 0 0 0 Nucleus 0 0.438718564319731 0.999999523162842 0 hPsi_site_5279 iPseU_CNN:0.999999523162842;iRNA_PseU:0 5280 chr12 108642007 108642007 1 + G A SKCM 108642007 - 108641987 108642027 41 CATGTCCGCAGTATAGGGGTCATACTCGAGCTTCCGGAGCC CATGTCCGCAGTATAGGGGTTATACTCGAGCTTCCGGAGCC Direct Gain 0 0.950221759573238 0 0.999456286430359 prediction 0.900443519146475 Functional Gain - WSCD2 ENSG00000075035 CDS Human protein_coding chr12:108642007 chr12:108642007 nonsynonymous SNV 0.868 0 21 hPsi_associated_SNPs_106320 0 0 0 0 0 Endoplasmic reticulum 0 0.438804891692403 0.998912572860718 0 hPsi_site_5280 iPseU_CNN:0.998912572860718;iRNA_PseU:0 5281 chr12 98927837 98927837 1 + C T COAD 98927837 + 98927817 98927857 41 GGCAGACATTAGTCAAGCTGCACAGATTCTTAGCTCAGATC GGCAGACATTAGTCAAGCTGTACAGATTCTTAGCTCAGATC Direct Gain 0 0.950221419025349 0 0.997600078582764 prediction 0.900442838050697 Functional Gain - TMPO ENSG00000120802 CDS Human protein_coding chr12:98927837 chr12:98927837 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_106321 0 0 1 0 0 Ribosome 0 0.438730789255514 0.995200157165528 0 hPsi_site_5281 iPseU_CNN:0.995200157165528;iRNA_PseU:0 5282 chr19 8550895 8550895 1 + G A UCEC 8550895 - 8550875 8550915 41 CGGGCACCATGCGCTCCATGCTCAGGCCCATGCGCTCGATG CGGGCACCATGCGCTCCATGTTCAGGCCCATGCGCTCGATG Direct Gain 0 0.950218294251837 0 0.999915361404419 prediction 0.900436588503675 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8550895 chr19:8550895 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_106322 0 0 0 0 0 Nucleus 0 0.438739169462021 0.999830722808838 0 hPsi_site_5282 iPseU_CNN:0.999830722808838;iRNA_PseU:0 5283 chr17 57290275 57290275 1 + G A COAD 57290275 - 57290255 57290295 41 TCTGTGGATTGGCCCAAACTCAAAGCTAAACTCAGGCTCGT TCTGTGGATTGGCCCAAACTTAAAGCTAAACTCAGGCTCGT Direct Gain 0 0.950218191460826 0 0.999908924102783 prediction 0.900436382921653 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57290275 chr17:57290275 synonymous SNV . 0 21 hPsi_associated_SNPs_106323 0 0 0 0 0 chromatin 0 0.438727908619711 0.999817848205566 0 hPsi_site_5283 iPseU_CNN:0.999817848205566;iRNA_PseU:0 5284 chr14 20389698 20389698 1 + T A PRAD 20389698 - 20389678 20389718 41 ACTACTAGTGACATTTCAGAAATTCTCCTTGGCCTCAGGTA ACTACTAGTGACATTTCAGATATTCTCCTTGGCCTCAGGTA Direct Gain 0 0.950217479781623 0 0.992885947227478 prediction 0.900434959563245 Functional Gain - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20389698 chr14:20389698 synonymous SNV . 0 21 hPsi_associated_SNPs_106324 0 0 0 0 0 unknown 0 0.438651947716469 0.985771894454956 0 hPsi_site_5284 iPseU_CNN:0.985771894454956;iRNA_PseU:0 5285 chr7 149575792 149575792 1 + C T LUSC 149575792 + 149575772 149575812 41 TCATCGCCATCCTGGCGCAGCTGAACCCCCTGTTCGGGCCC TCATCGCCATCCTGGCGCAGTTGAACCCCCTGTTCGGGCCC Direct Gain 0 0.950217059997839 0 0.988507866859436 prediction 0.900434119995677 Functional Gain - ATP6V0E2 ENSG00000171130 CDS Human protein_coding chr7:149575792 chr7:149575792 synonymous SNV . 0 21 hPsi_associated_SNPs_106325 0 0 1 0 3 Ribosome 0 0.438718759176106 0.977015733718872 0 hPsi_site_5285 iPseU_CNN:0.977015733718872;iRNA_PseU:0 5286 chr16 27231970 27231970 1 + G T UCEC 27231970 + 27231950 27231990 41 TGCATCCTGTCTCCTGGAGAGATCCTGTTCATCCCGGTGAA TGCATCCTGTCTCCTGGAGATATCCTGTTCATCCCGGTGAA Direct Gain 0 0.950214225684043 0 0.993113875389099 prediction 0.900428451368086 Functional Gain - KDM8 ENSG00000155666 CDS Human protein_coding chr16:27231970 chr16:27231970 nonsynonymous SNV 0.074 0 21 hPsi_associated_SNPs_106326 0 0 0 0 1 nucleolus 0 0.438719503863666 0.986227750778198 0 hPsi_site_5286 iPseU_CNN:0.986227750778198;iRNA_PseU:0 5287 chr4 1388347 1388347 1 + C T UCEC 1388347 + 1388327 1388367 41 GTGGAGTGCCCGCCTGCTCACACGTGCCCATGTGGAGTGCC GTGGAGTGCCCGCCTGCTCATACGTGCCCATGTGGAGTGCC Direct Gain 0 0.950212184945869 0 0.979266464710236 prediction 0.900424369891739 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388347 chr4:1388347 synonymous SNV . 0 21 hPsi_associated_SNPs_106327 0 0 1 0 0 chromatin 0 0.438719289346263 0.958532929420472 0 hPsi_site_5287 iPseU_CNN:0.958532929420472;iRNA_PseU:0 5288 chr22 20937220 20937220 1 + C T SKCM 20937220 + 20937200 20937240 41 GCGCGGACCCCACAGAACTTCAGTGTCCCCTCACCTGGACC GCGCGGACCCCACAGAACTTTAGTGTCCCCTCACCTGGACC Direct Gain 0 0.950208914031478 0 0.781930804252625 prediction 0.900417828062955 Functional Gain - MED15 ENSG00000099917 CDS Human protein_coding chr22:20937220 chr22:20937220 synonymous SNV . 0 21 hPsi_associated_SNPs_106328 0 0 1 0 2 Cytosol 0 0.43873551915794 0.56386160850525 0 hPsi_site_5288 iPseU_CNN:0.56386160850525;iRNA_PseU:0 5289 chr12 85459188 85459188 1 + C T LGG 85459188 + 85459168 85459208 41 AAAACTTAAGTACATTGATGCACAGGTATGCTCTCTGCCCT AAAACTTAAGTACATTGATGTACAGGTATGCTCTCTGCCCT Direct Gain 0 0.950201725650976 0 0.999998331069946 prediction 0.900403451301953 Functional Gain - LRRIQ1 ENSG00000133640 CDS Human protein_coding chr12:85459188 chr12:85459188 nonsynonymous SNV 0.995 0 21 hPsi_associated_SNPs_106329 0 0 0 0 1 cytosol 0 0.438718602711008 0.999996662139892 0 hPsi_site_5289 iPseU_CNN:0.999996662139892;iRNA_PseU:0 5290 chr1 203135680 203135680 1 + G A rs145693152 203135680 - 203135660 203135700 41 TGAACCTACCCTTTCTGCCTCTCCCACGTACAATCCTGGGC TGAACCTACCCTTTCTGCCTTTCCCACGTACAATCCTGGGC Direct Gain 0 0.950193303813839 0 0.999423980712891 prediction 0.900386607627679 Functional Gain - ADORA1 ENSG00000163485 UTR3 Human protein_coding chr1:203135680 chr1:203135680 . . 0 21 hPsi_associated_SNPs_106330 0 0 0 0 0 exosome 0 0.438718439474536 0.998847961425782 0 hPsi_site_5290 iPseU_CNN:0.998847961425782;iRNA_PseU:0 5291 chr1 153333143 153333143 1 + C T MESO 153333143 + 153333123 153333163 41 GAGAATAAGAATGAAAAGGTCATAGAACACATCATGGAGGA GAGAATAAGAATGAAAAGGTTATAGAACACATCATGGAGGA Direct Gain 0 0.950191291917348 0 0.936418414115906 prediction 0.900382583834695 Functional Gain - S100A9 ENSG00000163220 CDS Human protein_coding chr1:153333143 chr1:153333143 synonymous SNV . 0 21 hPsi_associated_SNPs_106331 0 0 0 0 1 exosome 0 0.438716890792906 0.872836828231812 0 hPsi_site_5291 iPseU_CNN:0.872836828231812;iRNA_PseU:0 5292 chr2 220342136 220342136 1 + C A UCEC 220342136 - 220342116 220342156 41 GCCAACTCTGCTTTGCAGGAGACCTCACCCGCCAGGTTCTG GCCAACTCTGCTTTGCAGGATACCTCACCCGCCAGGTTCTG Direct Gain 0 0.950176756523071 0 0.960561156272888 prediction 0.900353513046143 Functional Gain - SPEG ENSG00000072195 CDS Human protein_coding chr2:220342136 chr2:220342136 synonymous SNV . 0 21 hPsi_associated_SNPs_106332 0 0 0 0 0 Nucleus 0 0.438705057769959 0.921122312545776 0 hPsi_site_5292 iPseU_CNN:0.921122312545776;iRNA_PseU:0 5293 chrX 91134233 91134233 1 + G T BRCA 91134233 + 91134213 91134253 41 TCTGACTGTGGCTATCCAGTGACGACCTTCGAGGTACCTGT TCTGACTGTGGCTATCCAGTTACGACCTTCGAGGTACCTGT Direct Gain 0 0.950168974225937 0 0.99984210729599 prediction 0.900337948451874 Functional Gain - PCDH11X ENSG00000102290 CDS Human protein_coding chrX:91134233 chrX:91134233 synonymous SNV . 0 21 hPsi_associated_SNPs_106333 0 0 0 0 1 exosome 0 0.438689857279169 0.99968421459198 0 hPsi_site_5293 iPseU_CNN:0.99968421459198;iRNA_PseU:0 5294 chrX 100490939 100490939 1 + G A LGG 100490939 - 100490919 100490959 41 TGGTTCCAGGGGTCCAGAGGCACCAACAGACCCGTTCAACA TGGTTCCAGGGGTCCAGAGGTACCAACAGACCCGTTCAACA Direct Gain 0 0.950164511406071 0 0.990668952465057 prediction 0.900329022812142 Functional Gain - DRP2 ENSG00000102385 CDS Human protein_coding chrX:100490939 chrX:100490939 nonsynonymous SNV 0.727 0 21 hPsi_associated_SNPs_106334 0 0 0 0 0 nucleoplasm 0 0.438512484454991 0.981337904930114 0 hPsi_site_5294 iPseU_CNN:0.981337904930114;iRNA_PseU:0 5295 chr4 148461579 148461579 1 + C T SKCM 148461579 + 148461559 148461599 41 TAACTTGGCAACCATGAATTCATGTATAAACCCCATAGCTC TAACTTGGCAACCATGAATTTATGTATAAACCCCATAGCTC Direct Gain 0 0.950161446059161 0 0.985810279846191 prediction 0.900322892118322 Functional Gain - EDNRA ENSG00000151617 CDS Human protein_coding chr4:148461579 chr4:148461579 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106335 0 0 0 0 2 Nucleus 0 0.438722681710989 0.971620559692382 0 hPsi_site_5295 iPseU_CNN:0.971620559692382;iRNA_PseU:0 5296 chr9 97522766 97522766 1 + C T LUAD 97522766 + 97522746 97522786 41 GCAGATAAGGAAGACAGGGGCTCAGACAGCTACTGACTTTC GCAGATAAGGAAGACAGGGGTTCAGACAGCTACTGACTTTC Direct Gain 0 0.950159378368929 0 0.00395050644874573 prediction 0.900318756737858 Functional Gain - C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97522766 chr9:97522766 nonsynonymous SNV 0.989 0 21 hPsi_associated_SNPs_106336 0 0 1 0 1 Cytosol 0 0.438720012940473 0 0 hPsi_site_5296 iPseU_CNN:0;iRNA_PseU:0 5297 chr10 50167796 50167796 1 + G T UCEC 50167796 + 50167776 50167816 41 AGGACGGGACTGTGCTAGGAGACGTGCAGCTCCCTCCCTGG AGGACGGGACTGTGCTAGGATACGTGCAGCTCCCTCCCTGG Direct Gain 0 0.950153095217134 0 0.99999988079071 prediction 0.900306190434267 Functional Gain - WDFY4 ENSG00000128815 CDS Human protein_coding chr10:50167796 chr10:50167796 nonsynonymous SNV 0.350 4 21 hPsi_associated_SNPs_106337 0 0 0 0 2 exosome 0 0.438718534052767 0.99999976158142 0 hPsi_site_5297 iPseU_CNN:0.99999976158142;iRNA_PseU:0 5298 chr17 32684573 32684573 1 + G A STAD 32684573 - 32684553 32684593 41 GGACACCTGCTGGTGGTGATCACATAGCTCTTCAGCCTCTG GGACACCTGCTGGTGGTGATTACATAGCTCTTCAGCCTCTG Direct Gain 0 0.950152912231831 0 0.927065670490265 prediction 0.900305824463662 Functional Gain - CCL13 ENSG00000181374 CDS Human protein_coding chr17:32684573 chr17:32684573 synonymous SNV . 0 21 hPsi_associated_SNPs_106338 0 0 0 0 0 exosome 0 0.434418672604267 0.85413134098053 0 hPsi_site_5298 iPseU_CNN:0.85413134098053;iRNA_PseU:0 5299 chr12 93968616 93968616 1 + T A LIHC 93968616 - 93968596 93968636 41 GTTGGTCCAGCTGATGTTTTAACAGATATTGTTAGTAGGTA GTTGGTCCAGCTGATGTTTTTACAGATATTGTTAGTAGGTA Direct Gain 0 0.950152732548301 0 0.000279039144515991 prediction 0.900305465096602 Functional Gain - SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968616 chr12:93968616 synonymous SNV . 0 21 hPsi_associated_SNPs_106339 0 0 0 0 0 Ribosome 0 0.438595714324564 0 0 hPsi_site_5299 iPseU_CNN:0;iRNA_PseU:0 5300 chr11 101069470 101069470 1 + C A rs561890395 101069470 - 101069450 101069490 41 AGACCTTGGTTATTGTCTCTGATGCTCTCATCTGTAAAATG AGACCTTGGTTATTGTCTCTTATGCTCTCATCTGTAAAATG Direct Gain 0 0.950150759920899 0 0.984913945198059 prediction 0.900301519841799 Functional Gain - PGR-AS1;TRPC6 ENSG00000255504 ncRNA_intronic Human transcribed_processed_pseudogene chr11:101069470 chr11:101069470 . . 0 21 hPsi_associated_SNPs_106340 0 0 0 0 0 unknown 0 0.438718573988969 0.969827890396118 0 hPsi_site_5300 iPseU_CNN:0.969827890396118;iRNA_PseU:0 5301 chr21 47931385 47931385 1 + G A BLCA 47931385 - 47931365 47931405 41 GCAGTGAGAGGCTCCCCTCTCAGCACACTCGTCTCGCTTCC GCAGTGAGAGGCTCCCCTCTTAGCACACTCGTCTCGCTTCC Direct Gain 0 0.950149948019355 0 0.986514091491699 prediction 0.900299896038711 Functional Gain - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47931385 chr21:47931385 synonymous SNV . 0 21 hPsi_associated_SNPs_106341 0 0 0 0 0 Cytosol 0 0.438718548345214 0.973028182983398 0 hPsi_site_5301 iPseU_CNN:0.973028182983398;iRNA_PseU:0 5302 chr9 98775342 98775342 1 + G T LUSC 98775342 + 98775322 98775362 41 CAGTAATAGAGACTCTGTGTGAAAAAGCACCTCTAGCAGCA CAGTAATAGAGACTCTGTGTTAAAAAGCACCTCTAGCAGCA Direct Gain 0 0.950146049888395 0 0.756126940250397 prediction 0.900292099776789 Functional Gain - ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98775342 chr9:98775342 stopgain . 0 21 hPsi_associated_SNPs_106342 0 0 1 0 0 Nucleus 0 0.438718593118714 0.512253880500794 0 hPsi_site_5302 iPseU_CNN:0.512253880500794;iRNA_PseU:0 5303 chr3 119426303 119426303 1 + G T UCEC 119426303 + 119426283 119426323 41 TAACCTGATCCATTATCCAAGATATTCTCTATATTGGAGCA TAACCTGATCCATTATCCAATATATTCTCTATATTGGAGCA Direct Gain 0 0.950145504820605 0 0.591836929321289 prediction 0.90029100964121 Functional Gain - MAATS1 ENSG00000183833 CDS Human protein_coding chr3:119426303 chr3:119426303 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106343 0 0 0 0 1 exosome 0 0.438719188587232 0.183673858642578 0 hPsi_site_5303 iPseU_CNN:0.183673858642578;iRNA_PseU:0 5304 chr15 25339020 25339020 1 + C T SKCM 25339020 + 25339000 25339040 41 GGCCAGAGGCTGCGATGGATCATCTTTGTCTTGGGAGATTC GGCCAGAGGCTGCGATGGATTATCTTTGTCTTGGGAGATTC Direct Gain 0 0.950145180096362 0 0.99596107006073 prediction 0.900290360192725 Functional Gain - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25339020 chr15:25339020 . . 0 21 hPsi_associated_SNPs_106344 0 0 1 1 1 unknown 0 0.438718592019187 0.99192214012146 0 hPsi_site_5304 iPseU_CNN:0.99192214012146;iRNA_PseU:0 5305 chr6 155143463 155143463 1 + C T BLCA 155143463 + 155143443 155143483 41 AAGAGACGGTCCAGACAACTCAGAGCCCAACTCCAGTTGAA AAGAGACGGTCCAGACAACTTAGAGCCCAACTCCAGTTGAA Direct Gain 0 0.950137701790675 0 0.998965382575989 prediction 0.90027540358135 Functional Gain - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155143463 chr6:155143463 stopgain 0.997 0 21 hPsi_associated_SNPs_106345 0 0 1 0 1 Nucleus 0 0.438716352490745 0.997930765151978 0 hPsi_site_5305 iPseU_CNN:0.997930765151978;iRNA_PseU:0 5306 chr1 215792518 215792518 1 + G A UCEC 215792518 - 215792498 215792538 41 ATCGAGTAATTTGAGTAGCTCTTCTTCGGTTGGACCACCTA ATCGAGTAATTTGAGTAGCTTTTCTTCGGTTGGACCACCTA Direct Gain 0 0.950131589317192 0 0.999250173568726 prediction 0.900263178634384 Functional Gain - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215792518 chr1:215792518 nonsynonymous SNV 0.899 4 21 hPsi_associated_SNPs_106346 0 0 0 0 0 Ribosome 0 0.438718593121563 0.998500347137452 0 hPsi_site_5306 iPseU_CNN:0.998500347137452;iRNA_PseU:0 5307 chr3 184081347 184081347 1 + G A ESCA 184081347 - 184081327 184081367 41 CATACCTTACTTACCTCGGTCAAACTTCTTGCCCTCCGGGT CATACCTTACTTACCTCGGTTAAACTTCTTGCCCTCCGGGT Direct Gain 0 0.950128202574932 0 0.998776614665985 prediction 0.900256405149864 Functional Gain - POLR2H ENSG00000163882 CDS Human protein_coding chr3:184081347 chr3:184081347 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106347 0 0 0 0 0 Ribosome 0 0.438718597591587 0.99755322933197 0 hPsi_site_5307 iPseU_CNN:0.99755322933197;iRNA_PseU:0 5308 chr1 201757633 201757633 1 + C T UCEC 201757633 + 201757613 201757653 41 ACCACGCCAAGAATCACCCGCTCCAACAGCATCCCCACCCA ACCACGCCAAGAATCACCCGTTCCAACAGCATCCCCACCCA Direct Gain 0 0.95012768564903 0 0.999870717525482 prediction 0.900255371298061 Functional Gain - NAV1 ENSG00000134369 CDS Human protein_coding chr1:201757633 chr1:201757633 synonymous SNV . 0 21 hPsi_associated_SNPs_106348 0 0 0 0 1 Nucleus 0 0.43878954744197 0.999741435050964 0 hPsi_site_5308 iPseU_CNN:0.999741435050964;iRNA_PseU:0 5309 chr10 50031350 50031350 1 + G A rs45520233 50031350 - 50031330 50031370 41 AGAAAGTTCTTTCCAAGAATCACAGACATCCCCCTGGGTGG AGAAAGTTCTTTCCAAGAATTACAGACATCCCCCTGGGTGG Direct Gain 0 0.950127245902231 0 0.00483512878417969 prediction 0.900254491804461 Functional Gain - WDFY4 ENSG00000128815 UTR3 Human protein_coding chr10:50031350 chr10:50031350 . . 0 21 hPsi_associated_SNPs_106349 0 0 0 0 0 exosome 0 0.438718593297783 0 0 hPsi_site_5309 iPseU_CNN:0;iRNA_PseU:0 5310 chr8 69728129 69728129 1 + G T SARC 69728129 + 69728109 69728149 41 TTTGTTGTGCAGGTTCCGCTGATCTTCTTCTTTGCGTTCCA TTTGTTGTGCAGGTTCCGCTTATCTTCTTCTTTGCGTTCCA Direct Gain 0 0.950123021084253 0 0.999768793582916 prediction 0.900246042168507 Functional Gain - C8orf34 ENSG00000165084 CDS Human protein_coding chr8:69728129 chr8:69728129 nonsynonymous SNV 0.721 1 21 hPsi_associated_SNPs_106350 0 0 0 0 2 exosome 0 0.438731938630517 0.999537587165832 0 hPsi_site_5310 iPseU_CNN:0.999537587165832;iRNA_PseU:0 5311 chr20 43703697 43703697 1 + C T rs142232604 43703697 + 43703677 43703717 41 GAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGAT GAGGACCTTCAGAAGAGGCTTTTGGCCCTGGACCCCATGAT Direct Gain 0 0.950116757868713 0 0.998438477516174 prediction 0.900233515737426 Functional Gain - STK4 ENSG00000101109 CDS Human protein_coding chr20:43703697 chr20:43703697 synonymous SNV . 0 21 hPsi_associated_SNPs_106351 0 0 1 0 1 Ribosome 0 0.438718680695858 0.996876955032348 0 hPsi_site_5311 iPseU_CNN:0.996876955032348;iRNA_PseU:0 5312 chr21 48081768 48081768 1 + C T rs143321526 48081768 + 48081748 48081788 41 GCGGGGACCCTGCACGGCTTCACGGCCTGGTTTAGCGTCCA GCGGGGACCCTGCACGGCTTTACGGCCTGGTTTAGCGTCCA Direct Gain 0 0.950106664085187 0 0.999941825866699 prediction 0.900213328170374 Functional Gain - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48081768 chr21:48081768 synonymous SNV . 0 21 hPsi_associated_SNPs_106352 0 0 1 0 1 Cytosol 0 0.438718593353412 0.999883651733398 0 hPsi_site_5312 iPseU_CNN:0.999883651733398;iRNA_PseU:0 5313 chr15 23261093 23261093 1 + G A BLCA 23261093 - 23261073 23261113 41 ACCTCCTGCGACATTTTTCTCATCCTCTGCTGCCACCGGGC ACCTCCTGCGACATTTTTCTTATCCTCTGCTGCCACCGGGC Direct Gain 0 0.950105570791626 0 0.508774995803833 prediction 0.900211141583252 Functional Gain - GOLGA8IP ENSG00000153666 CDS Human other chr15:23261093 chr15:23261093 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106353 0 0 0 0 0 unknown 0 0.438408477881014 0.017549991607666 0 hPsi_site_5313 iPseU_CNN:0.017549991607666;iRNA_PseU:0 5314 chr8 92301385 92301385 1 + C T SKCM 92301385 + 92301365 92301405 41 ATTGGCCTTTGCTGTTCTCTCATCTGTGCACCCAGTGTTTG ATTGGCCTTTGCTGTTCTCTTATCTGTGCACCCAGTGTTTG Direct Gain 0 0.950105084954839 0 0.958539485931396 prediction 0.900210169909678 Functional Gain - SLC26A7 ENSG00000147606 CDS Human protein_coding chr8:92301385 chr8:92301385 nonsynonymous SNV 0.951 5 21 hPsi_associated_SNPs_106354 0 0 0 1 2 membrane 0 0.438764715540421 0.917078971862792 0 hPsi_site_5314 iPseU_CNN:0.917078971862792;iRNA_PseU:0 5315 chr20 44678295 44678295 1 + G A UCEC 44678295 - 44678275 44678315 41 GGGGTGCACCACATTCTGGTCTTGGTCCACACGCACCAGCA GGGGTGCACCACATTCTGGTTTTGGTCCACACGCACCAGCA Direct Gain 0 0.95010505671027 0 0.999987721443176 prediction 0.900210113420539 Functional Gain - SLC12A5 ENSG00000124140 CDS Human protein_coding chr20:44678295 chr20:44678295 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_106355 0 0 0 0 0 cytosol 0 0.438716142604441 0.999975442886352 0 hPsi_site_5315 iPseU_CNN:0.999975442886352;iRNA_PseU:0 5316 chr11 67816408 67816408 1 + C T SKCM 67816408 + 67816388 67816428 41 TTCAAGATGAAGATGTCCGTCATCCTGGGCGTCGTGCACAT TTCAAGATGAAGATGTCCGTTATCCTGGGCGTCGTGCACAT Direct Gain 0 0.950098693242724 0 0.999909281730652 prediction 0.900197386485449 Functional Gain - TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67816408 chr11:67816408 synonymous SNV . 0 21 hPsi_associated_SNPs_106356 0 0 0 0 2 Nucleus 0 0.434448199745064 0.999818563461304 0 hPsi_site_5316 iPseU_CNN:0.999818563461304;iRNA_PseU:0 5317 chr5 7709437 7709437 1 + G A STAD 7709437 - 7709417 7709457 41 TGATGTAGGTGTGCAAAGGGCTTGGCTGCCCCCCAGGACTC TGATGTAGGTGTGCAAAGGGTTTGGCTGCCCCCCAGGACTC Direct Gain 0 0.950092914612284 0 0.685460686683655 prediction 0.900185829224567 Functional Gain - ADCY2 ENSG00000078295 CDS Human protein_coding chr5:7709437 chr5:7709437 synonymous SNV . 0 21 hPsi_associated_SNPs_106357 0 0 0 0 0 exosome 0 0.438719254121934 0.37092137336731 0 hPsi_site_5317 iPseU_CNN:0.37092137336731;iRNA_PseU:0 5318 chr5 140223289 140223289 1 + C T SKCM 140223289 + 140223269 140223309 41 AGCAAGATTTAAATGTTGATCATGGCCTCAAAGTAAGTCCA AGCAAGATTTAAATGTTGATTATGGCCTCAAAGTAAGTCCA Direct Gain 0 0.950088317739047 0 0.99204695224762 prediction 0.900176635478094 Functional Gain - PCDHA8 ENSG00000204962 CDS Human protein_coding chr5:140223289 chr5:140223289 nonsynonymous SNV 0.136 0 21 hPsi_associated_SNPs_106358 0 0 0 0 1 exosome 0 0.434333068010174 0.98409390449524 0 hPsi_site_5318 iPseU_CNN:0.98409390449524;iRNA_PseU:0 5319 chr15 40991008 40991008 1 + G A UCEC 40991008 - 40990988 40991028 41 GGGTTGTGGGCCAAAGCTTTCTTCTTCCACTGAAGTATCTG GGGTTGTGGGCCAAAGCTTTTTTCTTCCACTGAAGTATCTG Direct Gain 0 0.950087946160814 0 0.999258995056152 prediction 0.900175892321628 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:40991008 chr15:40991008 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_106359 0 0 0 0 0 Cytosol 0 0.438723279555141 0.998517990112304 0 hPsi_site_5319 iPseU_CNN:0.998517990112304;iRNA_PseU:0 5320 chr17 72340466 72340466 1 + C T COAD 72340466 + 72340446 72340486 41 GTGGCCGGCATCACCGAAGTCTCCACCATCAATGCCAAGGA GTGGCCGGCATCACCGAAGTTTCCACCATCAATGCCAAGGA Direct Gain 0 0.950087896932489 0 0.989244639873505 prediction 0.900175793864978 Functional Gain - KIF19 ENSG00000196169 CDS Human protein_coding chr17:72340466 chr17:72340466 synonymous SNV . 0 21 hPsi_associated_SNPs_106360 0 0 0 0 0 exosome 0 0.438742579852588 0.97848927974701 0 hPsi_site_5320 iPseU_CNN:0.97848927974701;iRNA_PseU:0 5321 chr16 78064571 78064571 1 + G A COAD 78064571 - 78064551 78064591 41 GATAGCGATTCCGTTGACGTCAACAAACTTGCCTTCCGTGA GATAGCGATTCCGTTGACGTTAACAAACTTGCCTTCCGTGA Direct Gain 0 0.950085765657587 0 0.993288159370422 prediction 0.900171531315175 Functional Gain - CLEC3A ENSG00000166509 CDS Human protein_coding chr16:78064571 chr16:78064571 nonsynonymous SNV 0.973 3 21 hPsi_associated_SNPs_106361 0 0 0 0 0 unknown 0 0.438718590413494 0.986576318740844 0 hPsi_site_5321 iPseU_CNN:0.986576318740844;iRNA_PseU:0 5322 chr10 123848117 123848117 1 + G T LGG 123848117 + 123848097 123848137 41 GAACAGAAAGGTCAGCGAAAGATATTGGTCTTTGGAAGGCC GAACAGAAAGGTCAGCGAAATATATTGGTCTTTGGAAGGCC Direct Gain 0 0.950083586332262 0 0.99994170665741 prediction 0.900167172664525 Functional Gain - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123848117 chr10:123848117 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_106362 0 0 0 0 0 Cytoplasm 0 0.438725990663164 0.99988341331482 0 hPsi_site_5322 iPseU_CNN:0.99988341331482;iRNA_PseU:0 5323 chr14 94044364 94044364 1 + G A LUAD 94044364 - 94044344 94044384 41 AGGATGAAACAATTTAGATTCATTTCATCATCTTCACAATC AGGATGAAACAATTTAGATTTATTTCATCATCTTCACAATC Direct Gain 0 0.950078754010738 0 0.998028695583344 prediction 0.900157508021475 Functional Gain - UNC79 ENSG00000133958 CDS Human protein_coding chr14:94044364 chr14:94044364 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106363 0 0 0 0 0 nucleus 0 0.438709821345021 0.996057391166688 0 hPsi_site_5323 iPseU_CNN:0.996057391166688;iRNA_PseU:0 5324 chr20 21687305 21687305 1 + C T rs17861030 21687305 + 21687285 21687325 41 GGGGGGAGCAAGCCCCGCGTCACCACTCCCAACGTGGTCAA GGGGGGAGCAAGCCCCGCGTTACCACTCCCAACGTGGTCAA Direct Gain 0 0.950078616811184 0 0.999999582767487 prediction 0.900157233622368 Functional Gain - PAX1 ENSG00000125813 CDS Human protein_coding chr20:21687305 chr20:21687305 synonymous SNV . 0 21 hPsi_associated_SNPs_106364 0 0 0 0 0 unknown 0 0.43872135489112 0.999999165534974 0 hPsi_site_5324 iPseU_CNN:0.999999165534974;iRNA_PseU:0 5325 chr8 92346549 92346549 1 + C A HNSC 92346549 - 92346529 92346569 41 GCTTCCAGTCGCACAGACTTGATGTTTTCAAAAACATATGC GCTTCCAGTCGCACAGACTTTATGTTTTCAAAAACATATGC Direct Gain 0 0.950075007918024 0 0.000127404928207397 prediction 0.900150015836048 Functional Gain - SLC26A7 ENSG00000147606 CDS Human protein_coding chr8:92346549 chr8:92346549 synonymous SNV . 0 21 hPsi_associated_SNPs_106365 0 0 0 0 0 membrane 0 0.438849569905468 0 0 hPsi_site_5325 iPseU_CNN:0;iRNA_PseU:0 5326 chr2 29269123 29269123 1 + C T rs114429280 29269123 + 29269103 29269143 41 TTCCAGGGCTGAAATCTGTTCTTGTGGTCCTTGAGGTGGCA TTCCAGGGCTGAAATCTGTTTTTGTGGTCCTTGAGGTGGCA Direct Gain 0 0.950074914673512 0 0.982784867286682 prediction 0.900149829347025 Functional Gain - TOGARAM2 ENSG00000189350 intronic Human protein_coding chr2:29269123 chr2:29269123 . . 0 21 hPsi_associated_SNPs_106366 0 0 0 0 0 unknown 0 0.438718613198419 0.965569734573364 0 hPsi_site_5326 iPseU_CNN:0.965569734573364;iRNA_PseU:0 5327 chr9 114685159 114685159 1 + G A BLCA 114685159 - 114685139 114685179 41 TACATCAATGGCTGGATCATCATGATCTTGTACACAAAGGA TACATCAATGGCTGGATCATTATGATCTTGTACACAAAGGA Direct Gain 0 0.95006648399288 0 0.574658870697021 prediction 0.900132967985761 Functional Gain - UGCG ENSG00000148154 CDS Human protein_coding chr9:114685159 chr9:114685159 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106367 0 0 0 0 0 Ribosome 0 0.440672856814575 0.149317741394042 0 hPsi_site_5327 iPseU_CNN:0.149317741394042;iRNA_PseU:0 5328 chr6 70040426 70040426 1 + C A UCEC 70040426 - 70040406 70040446 41 AGGTCCCACAAAAGCATAGAGTAGTCCTCCTTCAAGAGAGA AGGTCCCACAAAAGCATAGATTAGTCCTCCTTCAAGAGAGA Direct Gain 0 0.950054314227312 0 0.239209532737732 prediction 0.900108628454624 Functional Gain - ADGRB3 ENSG00000135298 CDS Human protein_coding chr6:70040426 chr6:70040426 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_106368 0 0 0 0 0 Endoplasmic reticulum 0 0.438538178421687 0 0 hPsi_site_5328 iPseU_CNN:0;iRNA_PseU:0 5329 chr1 160719714 160719714 1 + G T LUAD 160719714 + 160719694 160719734 41 GAACATGGGGAAGAGGATGTGATTTATACCTGGAAGGCCCT GAACATGGGGAAGAGGATGTTATTTATACCTGGAAGGCCCT Direct Gain 0 0.950049697907366 0 0.970030307769775 prediction 0.900099395814732 Functional Gain - SLAMF7 ENSG00000026751 CDS Human protein_coding chr1:160719714 chr1:160719714 synonymous SNV . 0 21 hPsi_associated_SNPs_106369 0 0 0 0 0 exosome 0 0.438717776703151 0.94006061553955 0 hPsi_site_5329 iPseU_CNN:0.94006061553955;iRNA_PseU:0 5330 chr11 18487261 18487261 1 + G T UCEC 18487261 + 18487241 18487281 41 AAAAAGGAGAAACACGCCTTGATTTAGTCCAGCGAAATGTA AAAAAGGAGAAACACGCCTTTATTTAGTCCAGCGAAATGTA Direct Gain 0 0.950047502452957 0 0.998578131198883 prediction 0.900095004905914 Functional Gain - LDHAL6A ENSG00000166800 CDS Human protein_coding chr11:18487261 chr11:18487261 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_106370 0 0 0 0 2 Nucleus 0 0.438674648451625 0.997156262397766 0 hPsi_site_5330 iPseU_CNN:0.997156262397766;iRNA_PseU:0 5331 chr22 26304324 26304324 1 + G A SKCM 26304324 - 26304304 26304344 41 TCCTTCTGGTGCATCTGCTTCATCCGCTCGATCTCCAGCTC TCCTTCTGGTGCATCTGCTTTATCCGCTCGATCTCCAGCTC Direct Gain 0 0.950046508050301 0 0.99841696023941 prediction 0.900093016100603 Functional Gain - MYO18B ENSG00000133454 CDS Human protein_coding chr22:26304324 chr22:26304324 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_106371 0 0 0 0 0 chromatin 0 0.439298764270416 0.99683392047882 0 hPsi_site_5331 iPseU_CNN:0.99683392047882;iRNA_PseU:0 5332 chr16 68845691 68845691 1 + G A BLCA 68845691 - 68845671 68845711 41 AATGGTGAACATATTTTTGTCAGGGAGCTCAGGATCTTGGC AATGGTGAACATATTTTTGTTAGGGAGCTCAGGATCTTGGC Direct Gain 0 0.950036689542878 0 0.981570780277252 prediction 0.900073379085756 Functional Gain - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68845691 chr16:68845691 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106372 0 0 0 0 0 Nucleus 0 0.438945314479531 0.963141560554504 0 hPsi_site_5332 iPseU_CNN:0.963141560554504;iRNA_PseU:0 5333 chr20 32619404 32619404 1 + G T rs17091472 32619404 + 32619384 32619424 41 AGCTGGCTAAGCTCATCATTGTTACTGGTGAGTGAGGTTGC AGCTGGCTAAGCTCATCATTTTTACTGGTGAGTGAGGTTGC Direct Gain 0 0.950031532584791 0 0.997285902500153 prediction 0.900063065169582 Functional Gain - RALY ENSG00000125970 UTR5 Human protein_coding chr20:32619404 chr20:32619404 . . 0 21 hPsi_associated_SNPs_106373 0 0 1 0 2 Cytosol 0 0.438675999747102 0.994571805000306 0 hPsi_site_5333 iPseU_CNN:0.994571805000306;iRNA_PseU:0 5334 chr8 143599561 143599561 1 + C T SKCM 143599561 + 143599541 143599581 41 GGCTGTGGCGTGTCCTCTCTCACCCTGCTCATGCTGGTCAT GGCTGTGGCGTGTCCTCTCTTACCCTGCTCATGCTGGTCAT Direct Gain 0 0.950017741807768 0 0.0895338654518127 prediction 0.900035483615536 Functional Gain - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143599561 chr8:143599561 synonymous SNV . 0 21 hPsi_associated_SNPs_106374 0 0 0 0 2 Nucleus 0 0.438718593123019 0 0 hPsi_site_5334 iPseU_CNN:0;iRNA_PseU:0 5335 chr12 112924299 112924299 1 + C A ESCA 112924299 - 112924279 112924319 41 GTCCGAAAGTGGTATTGCCAGACCGTTCTCTCCGTATTCCC GTCCGAAAGTGGTATTGCCATACCGTTCTCTCCGTATTCCC Direct Gain 0 0.95001686019439 0 0.17528823018074 prediction 0.900033720388781 Functional Gain - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112924299 chr12:112924299 synonymous SNV . 0 21 hPsi_associated_SNPs_106375 0 0 0 0 0 Ribosome 0 0.438721075843754 0 0 hPsi_site_5335 iPseU_CNN:0;iRNA_PseU:0 5336 chr4 62599270 62599270 1 + C A ESCA 62599270 - 62599250 62599290 41 ACAAAAGGTTGAACTTACCTGATCTACTATCCAGAGGTCCA ACAAAAGGTTGAACTTACCTTATCTACTATCCAGAGGTCCA Direct Gain 0 0.950012854603499 0 0.999992311000824 prediction 0.900025709206999 Functional Gain - ADGRL3 ENSG00000150471 CDS Human protein_coding chr4:62599270 chr4:62599270 stopgain 0.998 0 21 hPsi_associated_SNPs_106376 0 0 0 0 0 exosome 0 0.438736659343765 0.999984622001648 0 hPsi_site_5336 iPseU_CNN:0.999984622001648;iRNA_PseU:0 5337 chr11 66010495 66010495 1 + G A LUSC 66010495 - 66010475 66010515 41 CCTGCCCTCGCACCTCTCAGCATAGTCTGCTGCTGCTTGGC CCTGCCCTCGCACCTCTCAGTATAGTCTGCTGCTGCTTGGC Direct Gain 0 0.950002898414948 0 0.664466381072998 prediction 0.900005796829896 Functional Gain - PACS1 ENSG00000175115 CDS Human protein_coding chr11:66010495 chr11:66010495 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106377 0 0 0 0 0 Cytosol 0 0.438718704794184 0.328932762145996 0 hPsi_site_5337 iPseU_CNN:0.328932762145996;iRNA_PseU:0 5338 chr17 77704925 77704925 1 + C T DLBC 77704925 + 77704905 77704945 41 AGAGGCCTGGCCGTCCTCCTCACTGTGGCTCTGGCCACGCT AGAGGCCTGGCCGTCCTCCTTACTGTGGCTCTGGCCACGCT Direct Gain 0 0.950002477525649 0 0.999883651733398 prediction 0.900004955051299 Functional Gain - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77704925 chr17:77704925 synonymous SNV . 0 21 hPsi_associated_SNPs_106378 0 0 1 0 0 exosome 0 0.438740560708661 0.999767303466796 0 hPsi_site_5338 iPseU_CNN:0.999767303466796;iRNA_PseU:0 5339 chr6 26368421 26368421 1 + C T LUSC 26368421 + 26368401 26368441 41 TGCAGCATAGATGAAAATGGCAAGTTCCCTGGCTTTCCTTC TGCAGCATAGATGAAAATGGTAAGTTCCCTGGCTTTCCTTC Direct Gain 0 0.950001955566065 0 0.999973475933075 prediction 0.90000391113213 Functional Gain - BTN3A2 ENSG00000186470 CDS Human protein_coding chr6:26368421 chr6:26368421 nonsynonymous SNV 0.209 2 21 hPsi_associated_SNPs_106379 0 0 0 0 2 Ribosome 0 0.439973241352625 0.99994695186615 0 hPsi_site_5339 iPseU_CNN:0.99994695186615;iRNA_PseU:0 5340 chr6 127898528 127898528 1 + C T SKCM 127898528 + 127898508 127898548 41 AGAATGGGGATGTATAAAATCATATTGAATCAGACAGCCAG AGAATGGGGATGTATAAAATTATATTGAATCAGACAGCCAG Direct Gain 0 0.950001200425743 0 0.106077134609222 prediction 0.900002400851487 Functional Gain - C6orf58 ENSG00000184530 CDS Human protein_coding chr6:127898528 chr6:127898528 synonymous SNV . 0 21 hPsi_associated_SNPs_106380 0 0 0 0 0 exosome 0 0.43871859013829 0 0 hPsi_site_5340 iPseU_CNN:0;iRNA_PseU:0 5341 chr11 92526050 92526050 1 + G A SKCM 92526050 - 92526030 92526070 41 TGATCCCAGAGCAGCAGATTCAAACACAGACGCTTCATACA TGATCCCAGAGCAGCAGATTTAAACACAGACGCTTCATACA Direct Gain 0 0.950000395787657 0 0.999942064285278 prediction 0.900000791575315 Functional Gain - FAT3 ENSG00000165323 CDS Human protein_coding chr11:92526050 chr11:92526050 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106381 0 0 0 0 0 nucleoplasm 0 0.443131971450312 0.999884128570556 0 hPsi_site_5341 iPseU_CNN:0.999884128570556;iRNA_PseU:0 5342 chr3 4354714 4354714 1 + G A BLCA 4354714 - 4354694 4354734 41 TCTAAGGCATGAGTTATCATCATAGTTCTCTCCATGGCGGA TCTAAGGCATGAGTTATCATTATAGTTCTCTCCATGGCGGA Direct Gain 0 0.949988658794386 0 0.956953167915344 prediction 0.899977317588772 Functional Gain - SETMAR ENSG00000170364 CDS Human protein_coding chr3:4354714 chr3:4354714 nonsynonymous SNV 0.906 0 21 hPsi_associated_SNPs_106382 0 0 0 0 0 Cytosol 0 0.438718356240429 0.913906335830688 0 hPsi_site_5342 iPseU_CNN:0.913906335830688;iRNA_PseU:0 5343 chr14 20923850 20923850 1 + G A SKCM 20923850 - 20923830 20923870 41 TCCCTTACCTGTCCTGAGCTCATCCCCGTCTTCCGCCACCG TCCCTTACCTGTCCTGAGCTTATCCCCGTCTTCCGCCACCG Direct Gain 0 0.949987352748184 0 0.988574981689453 prediction 0.899974705496367 Functional Gain - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20923850 chr14:20923850 nonsynonymous SNV 0.294 0 21 hPsi_associated_SNPs_106383 0 0 0 0 0 Cytosol 0 0.438718592403324 0.977149963378906 0 hPsi_site_5343 iPseU_CNN:0.977149963378906;iRNA_PseU:0 5344 chr20 8862380 8862380 1 + C T SKCM 8862380 + 8862360 8862400 41 AGATCAGTGAAGACAGCAATCACGGTTCTGCCCCTCTCTCC AGATCAGTGAAGACAGCAATTACGGTTCTGCCCCTCTCTCC Direct Gain 0 0.949977867444548 0 0.0209699869155884 prediction 0.899955734889096 Functional Gain - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8862380 chr20:8862380 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_106384 0 0 1 0 0 Nucleus 0 0.438718460462244 0 0 hPsi_site_5344 iPseU_CNN:0;iRNA_PseU:0 5345 chr5 102285306 102285306 1 + C T SKCM 102285306 + 102285286 102285326 41 ATGTCTTTGCCTATAGAGTTCACACTCACCATTTAGGTAAG ATGTCTTTGCCTATAGAGTTTACACTCACCATTTAGGTAAG Direct Gain 0 0.949976303587308 0 0.958373844623566 prediction 0.899952607174616 Functional Gain - PAM ENSG00000145730 CDS Human protein_coding chr5:102285306 chr5:102285306 nonsynonymous SNV 0.998 5 21 hPsi_associated_SNPs_106385 0 0 0 0 2 Ribosome 0 0.438728228829883 0.916747689247132 0 hPsi_site_5345 iPseU_CNN:0.916747689247132;iRNA_PseU:0 5346 chr17 7803698 7803698 1 + C T UCEC 7803698 + 7803678 7803718 41 ATCTGGAGGAGCTCTTCCATCTCCTGAACTTCCTCACCCCA ATCTGGAGGAGCTCTTCCATTTCCTGAACTTCCTCACCCCA Direct Gain 0 0.949970638590448 0 0.912876427173615 prediction 0.899941277180895 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7803698 chr17:7803698 nonsynonymous SNV 0.935 4 21 hPsi_associated_SNPs_106386 0 0 1 0 2 Cytosol 0 0.438718327007777 0.82575285434723 0 hPsi_site_5346 iPseU_CNN:0.82575285434723;iRNA_PseU:0 5347 chr4 88766771 88766771 1 + G A SKCM 88766771 - 88766751 88766791 41 CCCACTGAAAGGAGATATATCATTGTCCCCTCTCTCTTGAA CCCACTGAAAGGAGATATATTATTGTCCCCTCTCTCTTGAA Direct Gain 0 0.949970034437253 0 0.0313174426555634 prediction 0.899940068874506 Functional Gain - MEPE ENSG00000152595 CDS Human protein_coding chr4:88766771 chr4:88766771 nonsynonymous SNV 0.613 0 21 hPsi_associated_SNPs_106387 0 0 0 0 0 exosome 0 0.438754481292472 0 0 hPsi_site_5347 iPseU_CNN:0;iRNA_PseU:0 5348 chr8 10102637 10102637 1 + G A CESC 10102637 - 10102617 10102657 41 CAAGACCCAGAATTTCCTTTCAGCTCCCCAGAAACATCCCA CAAGACCCAGAATTTCCTTTTAGCTCCCCAGAAACATCCCA Direct Gain 0 0.949970019495428 0 0.643168568611145 prediction 0.899940038990857 Functional Gain - MSRA ENSG00000175806 CDS Human protein_coding chr8:10102637 chr8:10102637 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106388 0 0 0 0 0 Nucleus 0 0.438718593035649 0.28633713722229 0 hPsi_site_5348 iPseU_CNN:0.28633713722229;iRNA_PseU:0 5349 chr19 18974259 18974259 1 + C A COAD 18974259 - 18974239 18974279 41 GCCTTCGGGTTGCCCACAATGATGACGCCATACCTGCAACA GCCTTCGGGTTGCCCACAATTATGACGCCATACCTGCAACA Direct Gain 0 0.949969509548427 0 0.999926507472992 prediction 0.899939019096854 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18974259 chr19:18974259 synonymous SNV . 0 21 hPsi_associated_SNPs_106389 0 0 0 0 0 Nucleus 0 0.437837556162498 0.999853014945984 0 hPsi_site_5349 iPseU_CNN:0.999853014945984;iRNA_PseU:0 5350 chr8 102679837 102679837 1 + G A rs373871915 102679837 - 102679817 102679857 41 TGGTGGCCTCGAAGGAGAGTCATGCCCATGGAGAAGGAGAG TGGTGGCCTCGAAGGAGAGTTATGCCCATGGAGAAGGAGAG Direct Gain 0 0.949964122526699 0 0.96796065568924 prediction 0.899928245053399 Functional Gain - GRHL2 ENSG00000083307 UTR3 Human protein_coding chr8:102679837 chr8:102679837 . . 0 21 hPsi_associated_SNPs_106390 0 0 0 0 0 Nucleus 0 0.438718576757172 0.93592131137848 0 hPsi_site_5350 iPseU_CNN:0.93592131137848;iRNA_PseU:0 5351 chr17 41132975 41132975 1 + G A BLCA 41132975 - 41132955 41132995 41 GCAGCCGCGGAAGGCGAAGTCTTCGAGCTCCCGCAGAAGGC GCAGCCGCGGAAGGCGAAGTTTTCGAGCTCCCGCAGAAGGC Direct Gain 0 0.949963805346526 0 0.992923736572266 prediction 0.899927610693052 Functional Gain - RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41132975 chr17:41132975 nonsynonymous SNV 0.989 3 21 hPsi_associated_SNPs_106391 0 0 0 0 0 exosome 0 0.438718589732923 0.985847473144532 0 hPsi_site_5351 iPseU_CNN:0.985847473144532;iRNA_PseU:0 5352 chr20 51870136 51870136 1 + G A SKCM 51870136 - 51870116 51870156 41 CTCCTCGTCCGTCCCTGTGTCATTGCCACCCTGCAGTTGAG CTCCTCGTCCGTCCCTGTGTTATTGCCACCCTGCAGTTGAG Direct Gain 0 0.949963613445433 0 0.997734546661377 prediction 0.899927226890865 Functional Gain - TSHZ2 ENSG00000182463 CDS Human protein_coding chr20:51870136 chr20:51870136 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_106392 0 0 0 0 0 Cytoplasm 0 0.438718579683362 0.995469093322754 0 hPsi_site_5352 iPseU_CNN:0.995469093322754;iRNA_PseU:0 5353 chr6 30593657 30593657 1 + C A rs142489658 30593657 - 30593637 30593677 41 TCAAACTCCTGGGATCAAGTGATCAGCCCACCTTGGCTTCC TCAAACTCCTGGGATCAAGTTATCAGCCCACCTTGGCTTCC Direct Gain 0 0.949963157200865 0 0.841228842735291 prediction 0.89992631440173 Functional Gain - MRPS18B ENSG00000204568 UTR3 Human protein_coding chr6:30593657 chr6:30593657 . . 0 21 hPsi_associated_SNPs_106393 0 0 0 0 0 Cytosol 0 0.438730094048119 0.682457685470582 0 hPsi_site_5353 iPseU_CNN:0.682457685470582;iRNA_PseU:0 5354 chr11 2943334 2943334 1 + G T UCEC 2943334 + 2943314 2943354 41 CTCTCTGTCTGGCTCTAGGTGACCCAGGGCCTGGTCATCGG CTCTCTGTCTGGCTCTAGGTTACCCAGGGCCTGGTCATCGG Direct Gain 0 0.949962495320221 0 0.999838769435883 prediction 0.899924990640443 Functional Gain - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2943334 chr11:2943334 synonymous SNV . 0 21 hPsi_associated_SNPs_106394 0 0 1 0 2 Ribosome 0 0.438718614502568 0.999677538871766 0 hPsi_site_5354 iPseU_CNN:0.999677538871766;iRNA_PseU:0 5355 chr11 7110384 7110384 1 + C T BLCA 7110384 + 7110364 7110404 41 GATCGCCCGGGGAAGCTGTTCATTGGGGGCCTCAACCTCGA GATCGCCCGGGGAAGCTGTTTATTGGGGGCCTCAACCTCGA Direct Gain 0 0.949961206520278 0 0.999438524246216 prediction 0.899922413040556 Functional Gain - RBMXL2 ENSG00000170748 CDS Human protein_coding chr11:7110384 chr11:7110384 synonymous SNV . 0 21 hPsi_associated_SNPs_106395 0 0 0 0 0 exosome 0 0.438718592984357 0.998877048492432 0 hPsi_site_5355 iPseU_CNN:0.998877048492432;iRNA_PseU:0 5356 chr19 37619937 37619937 1 + C T LUSC 37619937 + 37619917 37619957 41 AATGTGGGATTGACTTTAGTCATGGCTCACAAGTTTACATG AATGTGGGATTGACTTTAGTTATGGCTCACAAGTTTACATG Direct Gain 0 0.949952943592579 0 0.998020529747009 prediction 0.899905887185158 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37619937 chr19:37619937 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106396 0 0 0 0 0 chromatin 0 0.438718521286138 0.996041059494018 0 hPsi_site_5356 iPseU_CNN:0.996041059494018;iRNA_PseU:0 5357 chr7 45113885 45113885 1 + C T LUSC 45113885 + 45113865 45113905 41 GCAGCTGCGCACCAAGCTGTCATCACAGGAGATCCAGCAGT GCAGCTGCGCACCAAGCTGTTATCACAGGAGATCCAGCAGT Direct Gain 0 0.949952183633397 0 0.99999737739563 prediction 0.899904367266794 Functional Gain - CCM2 ENSG00000136280 CDS Human protein_coding chr7:45113885 chr7:45113885 nonsynonymous SNV 0.771 4 21 hPsi_associated_SNPs_106397 0 0 1 0 1 Ribosome 0 0.438683146615073 0.99999475479126 0 hPsi_site_5357 iPseU_CNN:0.99999475479126;iRNA_PseU:0 5358 chr5 129040073 129040073 1 + G T LUSC 129040073 + 129040053 129040093 41 GCTATGTGTGGCGAATGGGTGACTGGTCTAAGGTGAGAACC GCTATGTGTGGCGAATGGGTTACTGGTCTAAGGTGAGAACC Direct Gain 0 0.949951641589006 0 0.989199459552765 prediction 0.899903283178013 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:129040073 chr5:129040073 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106398 0 0 1 1 1 exosome 0 0.438719732315058 0.97839891910553 0 hPsi_site_5358 iPseU_CNN:0.97839891910553;iRNA_PseU:0 5359 chr14 101321242 101321242 1 + G T ESCA 101321242 + 101321222 101321262 41 GAACATTTTGGATCAGGACTGATGGGAGAATCTCCTTTCAT GAACATTTTGGATCAGGACTTATGGGAGAATCTCCTTTCAT Direct Gain 0 0.949947955753001 0 0.999834895133972 prediction 0.899895911506001 Functional Gain - MEG3 ENSG00000214548;ENSG00000258663 ncRNA_intronic Human other chr14:101321242 chr14:101321242 . . 0 21 hPsi_associated_SNPs_106399 0 0 1 0 0 unknown 0 0.438710774954992 0.999669790267944 0 hPsi_site_5359 iPseU_CNN:0.999669790267944;iRNA_PseU:0 5360 chr13 45694684 45694684 1 + C T rs192725652 45694684 + 45694664 45694704 41 GCAGGTAAGGAACGCCGGCTCTTCGCCTCTCAGCGCGGCTT GCAGGTAAGGAACGCCGGCTTTTCGCCTCTCAGCGCGGCTT Direct Gain 0 0.949945564751473 0 0.999731242656708 prediction 0.899891129502946 Functional Gain - GTF2F2 ENSG00000188342 UTR5 Human protein_coding chr13:45694684 chr13:45694684 . . 0 21 hPsi_associated_SNPs_106400 0 0 1 0 0 Cytosol 0 0.438720877377815 0.999462485313416 0 hPsi_site_5360 iPseU_CNN:0.999462485313416;iRNA_PseU:0 5361 chr5 52368966 52368966 1 + C T LUAD 52368966 + 52368946 52368986 41 AGAGAACAACCCTTTATTGTCAGCAACCAAAACAAAAGGTT AGAGAACAACCCTTTATTGTTAGCAACCAAAACAAAAGGTT Direct Gain 0 0.949943726842321 0 0.231555372476578 prediction 0.899887453684643 Functional Gain - ITGA2 ENSG00000164171 CDS Human protein_coding chr5:52368966 chr5:52368966 synonymous SNV . 0 21 hPsi_associated_SNPs_106401 0 0 0 0 1 cytosol 0 0.438703265545322 0 0 hPsi_site_5361 iPseU_CNN:0;iRNA_PseU:0 5362 chr19 45912143 45912143 1 + C A STAD 45912143 - 45912123 45912163 41 CCTGTGGCTGAGACTCAACTGTCACCCCCTCCTCTGGCTCC CCTGTGGCTGAGACTCAACTTTCACCCCCTCCTCTGGCTCC Direct Gain 0 0.949943457867347 0 0.988601088523865 prediction 0.899886915734694 Functional Gain - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45912143 chr19:45912143 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106402 0 0 1 0 0 Ribosome 0 0.438718593032066 0.97720217704773 0 hPsi_site_5362 iPseU_CNN:0.97720217704773;iRNA_PseU:0 5363 chr12 31116946 31116946 1 + C T UCEC 31116946 + 31116926 31116966 41 TGGGAGCGGAAGGGCTGCCTCTCCACGGTCAGTGCCCGCCC TGGGAGCGGAAGGGCTGCCTTTCCACGGTCAGTGCCCGCCC Direct Gain 0 0.949940013120489 0 0.999788761138916 prediction 0.899880026240979 Functional Gain - TSPAN11 ENSG00000110900 CDS Human protein_coding chr12:31116946 chr12:31116946 synonymous SNV . 0 21 hPsi_associated_SNPs_106403 0 0 0 0 1 Cytosol 0 0.438716641697286 0.999577522277832 0 hPsi_site_5363 iPseU_CNN:0.999577522277832;iRNA_PseU:0 5364 chr11 74351706 74351706 1 + G T LUSC 74351706 + 74351686 74351726 41 AGACCCCCTGCCATGACTGTGAAAAAAGAACCCAGAGAGGA AGACCCCCTGCCATGACTGTTAAAAAAGAACCCAGAGAGGA Direct Gain 0 0.949939958518224 0 0.986053943634033 prediction 0.899879917036447 Functional Gain - POLD3 ENSG00000077514 CDS Human protein_coding chr11:74351706 chr11:74351706 synonymous SNV . 0 21 hPsi_associated_SNPs_106404 0 0 1 0 1 Nucleus 0 0.438718592992957 0.972107887268066 0 hPsi_site_5364 iPseU_CNN:0.972107887268066;iRNA_PseU:0 5365 chr10 25701280 25701280 1 + G T UCEC 25701280 + 25701260 25701300 41 GCTGCCCCTTCTGTGCTGATGACAGCCCATGCTTCGTCCAG GCTGCCCCTTCTGTGCTGATTACAGCCCATGCTTCGTCCAG Direct Gain 0 0.949920540252562 0 0.961492836475372 prediction 0.899841080505124 Functional Gain - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25701280 chr10:25701280 nonsynonymous SNV 0.765 4 21 hPsi_associated_SNPs_106405 0 0 0 0 0 Endoplasmic reticulum 0 0.438718461327679 0.922985672950744 0 hPsi_site_5365 iPseU_CNN:0.922985672950744;iRNA_PseU:0 5366 chr17 57288495 57288495 1 + G A ESCA 57288495 - 57288475 57288515 41 AGCAAAGATTCCGGGTCCTTCACAGTACAATGACTCCTAAG AGCAAAGATTCCGGGTCCTTTACAGTACAATGACTCCTAAG Direct Gain 0 0.949920299721121 0 0.890533804893494 prediction 0.899840599442242 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57288495 chr17:57288495 synonymous SNV . 0 21 hPsi_associated_SNPs_106406 0 0 0 0 0 chromatin 0 0.438718592995327 0.781067609786988 0 hPsi_site_5366 iPseU_CNN:0.781067609786988;iRNA_PseU:0 5367 chr3 44945406 44945406 1 + G A BLCA 44945406 - 44945386 44945426 41 TTGGGCAGATCCGGTCGCTTCATCCAGGCATCCGTCCACAC TTGGGCAGATCCGGTCGCTTTATCCAGGCATCCGTCCACAC Direct Gain 0 0.949917196643074 0 0.976478934288025 prediction 0.899834393286148 Functional Gain - TGM4 ENSG00000163810 CDS Human protein_coding chr3:44945406 chr3:44945406 nonsynonymous SNV 0.872 3 21 hPsi_associated_SNPs_106407 0 0 0 0 0 exosome 0 0.438718582100393 0.95295786857605 0 hPsi_site_5367 iPseU_CNN:0.95295786857605;iRNA_PseU:0 5368 chr9 130097568 130097568 1 + C T SKCM 130097568 + 130097548 130097588 41 AAGGGCATGAGATCATGTTTCATGTTTCCACCATGTTGCCA AAGGGCATGAGATCATGTTTTATGTTTCCACCATGTTGCCA Direct Gain 0 0.949916791108329 0 0.279213607311249 prediction 0.899833582216658 Functional Gain - GARNL3 ENSG00000136895 CDS Human protein_coding chr9:130097568 chr9:130097568 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_106408 0 0 0 0 2 Nucleus 0 0.438609945981421 0 0 hPsi_site_5368 iPseU_CNN:0;iRNA_PseU:0 5369 chr1 161681140 161681140 1 + C A COAD 161681140 - 161681120 161681160 41 ACGGTGATGGAGAATTCCCTGTTAGGCCCGGGGGGACCCAG ACGGTGATGGAGAATTCCCTTTTAGGCCCGGGGGGACCCAG Direct Gain 0 0.949915445966664 0 0.849033236503601 prediction 0.899830891933327 Functional Gain - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681140 chr1:161681140 nonsynonymous SNV 0.254 0 21 hPsi_associated_SNPs_106409 0 0 0 0 0 Endoplasmic reticulum 0 0.438718404534424 0.698066473007202 0 hPsi_site_5369 iPseU_CNN:0.698066473007202;iRNA_PseU:0 5370 chr14 23511481 23511481 1 + G T LUAD 23511481 + 23511461 23511501 41 GCAGTCCCCTGACACCCAGGGACCATCACCTCACCTGCCTC GCAGTCCCCTGACACCCAGGTACCATCACCTCACCTGCCTC Direct Gain 0 0.949895408663896 0 0.974910378456116 prediction 0.899790817327792 Functional Gain - PSMB11 ENSG00000222028 CDS Human protein_coding chr14:23511481 chr14:23511481 nonsynonymous SNV 0.061 1 21 hPsi_associated_SNPs_106410 0 0 0 0 0 exosome 0 0.438711389369031 0.949820756912232 0 hPsi_site_5370 iPseU_CNN:0.949820756912232;iRNA_PseU:0 5371 chr11 126131377 126131377 1 + G A rs34495134 126131377 - 126131357 126131397 41 GAATAGGAAACAGTATACCTCTTATTTCACTGTGTGCTGCA GAATAGGAAACAGTATACCTTTTATTTCACTGTGTGCTGCA Direct Gain 0 0.949889011701877 0 0.0998462438583374 prediction 0.899778023403755 Functional Gain - FAM118B ENSG00000197798 CDS Human protein_coding chr11:126131377 chr11:126131377 nonsynonymous SNV 0.983 1 21 hPsi_associated_SNPs_106411 0 0 0 0 0 Ribosome 0 0.43781276123686 0 0 hPsi_site_5371 iPseU_CNN:0;iRNA_PseU:0 5372 chr13 26043183 26043183 1 + G A UCEC 26043183 - 26043163 26043203 41 GGCGGGTGCCTCCAGCTGGTCTCCAACAGACGTGGCCCGGG GGCGGGTGCCTCCAGCTGGTTTCCAACAGACGTGGCCCGGG Direct Gain 0 0.94988534151292 0 0.997047543525696 prediction 0.899770683025839 Functional Gain - ATP8A2 ENSG00000132932 CDS Human protein_coding chr13:26043183 chr13:26043183 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106412 0 0 0 0 0 unknown 0 0.438673290242636 0.994095087051392 0 hPsi_site_5372 iPseU_CNN:0.994095087051392;iRNA_PseU:0 5373 chr1 158725466 158725466 1 + G A LUSC 158725466 - 158725446 158725486 41 GAGTAGGTGGCTGAGAATCTCAAATACATGACAGCCACACT GAGTAGGTGGCTGAGAATCTTAAATACATGACAGCCACACT Direct Gain 0 0.949883314192004 0 0.999817848205566 prediction 0.899766628384008 Functional Gain - OR6K6 ENSG00000180433 CDS Human protein_coding chr1:158725466 chr1:158725466 synonymous SNV . 0 21 hPsi_associated_SNPs_106413 0 0 0 0 0 unknown 0 0.438054108602713 0.999635696411132 0 hPsi_site_5373 iPseU_CNN:0.999635696411132;iRNA_PseU:0 5374 chr22 24656964 24656964 1 + G A rs532969501 24656964 - 24656944 24656984 41 AGCACAGCCAGGGTCGAGGTCACTCCCTCCCTGAGGACTCT AGCACAGCCAGGGTCGAGGTTACTCCCTCCCTGAGGACTCT Direct Gain 0 0.949868995661377 0 0.999990940093994 prediction 0.899737991322755 Functional Gain - POM121L9P ENSG00000128262 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:24656964 chr22:24656964 . . 0 21 hPsi_associated_SNPs_106414 0 0 0 0 0 unknown 0 0.438680498680553 0.999981880187988 0 hPsi_site_5374 iPseU_CNN:0.999981880187988;iRNA_PseU:0 5375 chr3 64575013 64575013 1 + C T rs529293656 64575013 + 64574993 64575033 41 AATGAAGTTTGAGTTTTAGGCACATCCTTTATGGAATATAA AATGAAGTTTGAGTTTTAGGTACATCCTTTATGGAATATAA Direct Gain 0 0.949867961149138 0 0.99999588727951 prediction 0.899735922298276 Functional Gain - ADAMTS9-AS1 ENSG00000163638 intronic Human protein_coding chr3:64575013 chr3:64575013 . . 0 21 hPsi_associated_SNPs_106415 0 0 0 0 0 unknown 0 0.438718606168521 0.99999177455902 0 hPsi_site_5375 iPseU_CNN:0.99999177455902;iRNA_PseU:0 5376 chr22 26228898 26228898 1 + G A rs375955648 26228898 - 26228878 26228918 41 GGGTCCGGGAGGTCAAACTGCACAGGAACACCTTCCTGGAA GGGTCCGGGAGGTCAAACTGTACAGGAACACCTTCCTGGAA Direct Gain 0 0.949863776935009 0 0.992855191230774 prediction 0.899727553870018 Functional Gain - MYO18B ENSG00000133454 CDS Human protein_coding chr22:26228898 chr22:26228898 synonymous SNV . 0 21 hPsi_associated_SNPs_106416 0 0 0 0 0 chromatin 0 0.438719209457835 0.985710382461548 0 hPsi_site_5376 iPseU_CNN:0.985710382461548;iRNA_PseU:0 5377 chrX 152806837 152806837 1 + G A UCEC 152806837 - 152806817 152806857 41 CTGCCTGCGCTTCTCCAGGTCATTGGTGTTGTCCGCCAGGC CTGCCTGCGCTTCTCCAGGTTATTGGTGTTGTCCGCCAGGC Direct Gain 0 0.949860732635306 0 0.995383024215698 prediction 0.899721465270613 Functional Gain - ATP2B3 ENSG00000067842 CDS Human protein_coding chrX:152806837 chrX:152806837 nonsynonymous SNV 0.976 2 21 hPsi_associated_SNPs_106417 0 0 0 0 0 exosome 0 0.439555161333718 0.990766048431396 0 hPsi_site_5377 iPseU_CNN:0.990766048431396;iRNA_PseU:0 5378 chr6 37344716 37344716 1 + G A GBM 37344716 - 37344696 37344736 41 TCTTCCTTCTGTGCTTGCATCTTCTCCTTCTCTTCCTGCAA TCTTCCTTCTGTGCTTGCATTTTCTCCTTCTCTTCCTGCAA Direct Gain 0 0.949857422076294 0 0.999279022216797 prediction 0.899714844152588 Functional Gain - RNF8 ENSG00000112130 CDS Human protein_coding chr6:37344716 chr6:37344716 synonymous SNV . 0 21 hPsi_associated_SNPs_106418 0 0 0 0 0 Ribosome 0 0.438718717220476 0.998558044433594 0 hPsi_site_5378 iPseU_CNN:0.998558044433594;iRNA_PseU:0 5379 chr7 90896136 90896136 1 + C T BLCA 90896136 + 90896116 90896156 41 AAACAAGGGGAGACTACAGTCTGAGACCCGGGGCTCAGCCC AAACAAGGGGAGACTACAGTTTGAGACCCGGGGCTCAGCCC Direct Gain 0 0.949854340663084 0 0.174288541078568 prediction 0.899708681326167 Functional Gain - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90896136 chr7:90896136 synonymous SNV . 0 21 hPsi_associated_SNPs_106419 0 0 1 0 0 Endoplasmic reticulum 0 0.438718592870265 0 0 hPsi_site_5379 iPseU_CNN:0;iRNA_PseU:0 5380 chr19 55019312 55019312 1 + G A SKCM 55019312 - 55019292 55019332 41 ATAAAGCCCGGCATTTCCTTCACTTACTGAGTCAATGTGGA ATAAAGCCCGGCATTTCCTTTACTTACTGAGTCAATGTGGA Direct Gain 0 0.94985390885857 0 0.966621577739716 prediction 0.899707817717141 Functional Gain - LAIR2 ENSG00000167618 CDS Human protein_coding chr19:55019312 chr19:55019312 nonsynonymous SNV 0.007 2 21 hPsi_associated_SNPs_106420 0 0 0 0 0 exosome 0 0.438718590895903 0.933243155479432 0 hPsi_site_5380 iPseU_CNN:0.933243155479432;iRNA_PseU:0 5381 chr15 54305959 54305959 1 + G A SKCM 54305959 - 54305939 54305979 41 TGTGCGCAACTGCTCAATTTCACTTTGTACAACCTCCACAC TGTGCGCAACTGCTCAATTTTACTTTGTACAACCTCCACAC Direct Gain 0 0.949852946357309 0 0.980538010597229 prediction 0.899705892714619 Functional Gain - UNC13C ENSG00000137766 CDS Human protein_coding chr15:54305959 chr15:54305959 nonsynonymous SNV 0.931 4 21 hPsi_associated_SNPs_106421 0 0 0 0 0 exosome 0 0.433653881802055 0.961076021194458 0 hPsi_site_5381 iPseU_CNN:0.961076021194458;iRNA_PseU:0 5382 chr6 26508840 26508840 1 + G T UCEC 26508840 + 26508820 26508860 41 ACTGCCTGAGAAAACAGAGAGATTTGACTCCTGGCCCTGTG ACTGCCTGAGAAAACAGAGATATTTGACTCCTGGCCCTGTG Direct Gain 0 0.949852293876448 0 0.998864948749542 prediction 0.899704587752897 Functional Gain - BTN1A1 ENSG00000124557 CDS Human protein_coding chr6:26508840 chr6:26508840 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_106422 0 0 0 0 0 nucleoplasm 0 0.432891064506807 0.997729897499084 0 hPsi_site_5382 iPseU_CNN:0.997729897499084;iRNA_PseU:0 5383 chr21 35260488 35260488 1 + G T LUAD 35260488 + 35260468 35260508 41 GGACGGAGATCCGTGTGGCGGACATCAAGAAAGACCAGGGC GGACGGAGATCCGTGTGGCGTACATCAAGAAAGACCAGGGC Direct Gain 0 0.949852268830011 0 0.999334216117859 prediction 0.899704537660022 Functional Gain - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35260488 chr21:35260488 nonsynonymous SNV 0.964 4 21 hPsi_associated_SNPs_106423 0 0 0 0 1 Nucleus 0 0.43398105151421 0.998668432235718 0 hPsi_site_5383 iPseU_CNN:0.998668432235718;iRNA_PseU:0 5384 chr18 14763769 14763769 1 + C A LUAD 14763769 - 14763749 14763789 41 AGCGTGCAGCCTCGTCAGGTGTTTTTTCCAGCAAGCTTTCA AGCGTGCAGCCTCGTCAGGTTTTTTTTCCAGCAAGCTTTCA Direct Gain 0 0.949848465473057 0 0.997772455215454 prediction 0.899696930946114 Functional Gain - ANKRD30B ENSG00000180777 CDS Human protein_coding chr18:14763769 chr18:14763769 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106424 0 0 0 0 0 exosome 0 0.438716792659633 0.995544910430908 0 hPsi_site_5384 iPseU_CNN:0.995544910430908;iRNA_PseU:0 5385 chr22 46508318 46508318 1 + C T rs116185093 46508318 + 46508298 46508338 41 AGGGAGCCGGCTGCCTGTGACAGCGTCGCAAAATGCCGCCA AGGGAGCCGGCTGCCTGTGATAGCGTCGCAAAATGCCGCCA Direct Gain 0 0.949848289237439 0 0.994482040405273 prediction 0.899696578474877 Functional Gain - MIRLET7BHG ENSG00000197182 UTR3 Human lincRNA chr22:46508318 chr22:46508318 . . 0 21 hPsi_associated_SNPs_106425 0 0 0 2 0 Nucleus 0 0.438718266424363 0.988964080810546 0 hPsi_site_5385 iPseU_CNN:0.988964080810546;iRNA_PseU:0 5386 chr19 6928286 6928286 1 + G T UCEC 6928286 + 6928266 6928306 41 AGGAGCAAGGAGACCTGCGAGATCTGGAATTTCCAGGGACG AGGAGCAAGGAGACCTGCGATATCTGGAATTTCCAGGGACG Direct Gain 0 0.94983959946774 0 0.732365846633911 prediction 0.899679198935481 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6928286 chr19:6928286 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_106426 0 0 0 0 0 exosome 0 0.438718593031542 0.464731693267822 0 hPsi_site_5386 iPseU_CNN:0.464731693267822;iRNA_PseU:0 5387 chr2 168100416 168100416 1 + C A LUSC 168100416 - 168100396 168100436 41 AACATCCAACACTTTCTGGAGACATCTGTACCTATTATTTT AACATCCAACACTTTCTGGATACATCTGTACCTATTATTTT Direct Gain 0 0.949839334338534 0 0.872633576393127 prediction 0.899678668677069 Functional Gain - XIRP2 ENSG00000163092 CDS Human protein_coding chr2:168100416 chr2:168100416 synonymous SNV . 0 21 hPsi_associated_SNPs_106427 0 0 0 0 0 exosome 0 0.439072491374757 0.745267152786254 0 hPsi_site_5387 iPseU_CNN:0.745267152786254;iRNA_PseU:0 5388 chr4 126370157 126370157 1 + C A BLCA 126370157 - 126370137 126370177 41 AAAATTGGGGCATTATCATTGACATCTAATACTGTTATATC AAAATTGGGGCATTATCATTTACATCTAATACTGTTATATC Direct Gain 0 0.949838635552815 0 0.706989467144012 prediction 0.89967727110563 Functional Gain - FAT4 ENSG00000196159 CDS Human protein_coding chr4:126370157 chr4:126370157 synonymous SNV . 0 21 hPsi_associated_SNPs_106428 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592279164 0.413978934288024 0 hPsi_site_5388 iPseU_CNN:0.413978934288024;iRNA_PseU:0 5389 chr11 33693207 33693207 1 + T A rs76669144 33693207 - 33693187 33693227 41 AAAAAGCATCTCTATTAGTTAAATTCCTCACCTCCTCCATT AAAAAGCATCTCTATTAGTTTAATTCCTCACCTCCTCCATT Direct Gain 0 0.949834277850912 0 0.999893665313721 prediction 0.899668555701824 Functional Gain - KIAA1549L ENSG00000255202 ncRNA_intronic Human antisense chr11:33693207 chr11:33693207 . . 0 21 hPsi_associated_SNPs_106429 0 0 0 0 0 exosome 0 0.438718572555235 0.999787330627442 0 hPsi_site_5389 iPseU_CNN:0.999787330627442;iRNA_PseU:0 5390 chr2 132057178 132057178 1 + G A rs116591397 132057178 - 132057158 132057198 41 GGCGGCTACGCACCCAGGTTCAGGTATGGATCGCGCGTCCT GGCGGCTACGCACCCAGGTTTAGGTATGGATCGCGCGTCCT Direct Gain 0 0.949818445937699 0 0.700747132301331 prediction 0.899636891875397 Functional Gain - LOC440910 ENSG00000231431;ENSG00000236516 ncRNA_exonic Human other chr2:132057178 chr2:132057178 . . 0 21 hPsi_associated_SNPs_106430 0 0 0 0 0 unknown 0 0.438715271864526 0.401494264602662 0 hPsi_site_5390 iPseU_CNN:0.401494264602662;iRNA_PseU:0 5391 chr15 64972464 64972464 1 + G A UCEC 64972464 - 64972444 64972484 41 ACAAGTCACACTGGGGCTGGCTCGTGCCTTGTCAGCATCTT ACAAGTCACACTGGGGCTGGTTCGTGCCTTGTCAGCATCTT Direct Gain 0 0.949817986697245 0 0.999676823616028 prediction 0.89963597339449 Functional Gain - ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64972464 chr15:64972464 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_106431 0 0 0 0 0 Endoplasmic reticulum 0 0.438716647694477 0.999353647232056 0 hPsi_site_5391 iPseU_CNN:0.999353647232056;iRNA_PseU:0 5392 chr14 29237007 29237007 1 + G A CESC 29237007 - 29236987 29237027 41 TTCTCGTACTTGCCGTTCTTCTTCTCGCCCTCCTTGCCCCC TTCTCGTACTTGCCGTTCTTTTTCTCGCCCTCCTTGCCCCC Direct Gain 0 0.949814184613933 0 0.998037338256836 prediction 0.899628369227866 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237007 chr14:29237007 synonymous SNV . 0 21 hPsi_associated_SNPs_106432 0 0 0 0 0 Cytosol 0 0.438718592474901 0.996074676513672 0 hPsi_site_5392 iPseU_CNN:0.996074676513672;iRNA_PseU:0 5393 chr11 611923 611923 1 + G A rs112818794 611923 - 611903 611943 41 CGCAGGAACCCGACGGCAGGCATGGTGATGCCCCCCATTTC CGCAGGAACCCGACGGCAGGTATGGTGATGCCCCCCATTTC Direct Gain 0 0.949813601929063 0 0.999904870986938 prediction 0.899627203858126 Functional Gain - PHRF1 ENSG00000070047 UTR3 Human protein_coding chr11:611923 chr11:611923 . . 0 21 hPsi_associated_SNPs_106433 0 0 0 0 0 Nucleus 0 0.438328996540149 0.999809741973876 0 hPsi_site_5393 iPseU_CNN:0.999809741973876;iRNA_PseU:0 5394 chr20 31692652 31692652 1 + G A HNSC 31692652 - 31692632 31692672 41 TGCGGGCATGAATGCCAGGTCAAAAATCTTCTCCACCAGCA TGCGGGCATGAATGCCAGGTTAAAAATCTTCTCCACCAGCA Direct Gain 0 0.949812496774741 0 0.99261462688446 prediction 0.899624993549482 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31692652 chr20:31692652 nonsynonymous SNV 0.960 0 21 hPsi_associated_SNPs_106434 0 0 0 0 0 exosome 0 0.43871859297568 0.98522925376892 0 hPsi_site_5394 iPseU_CNN:0.98522925376892;iRNA_PseU:0 5395 chr11 62554107 62554107 1 + A T READ 62554107 + 62554087 62554127 41 ATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCG ATGGGACAGCCTTCTCTTTCTAGAGTCGTCCTCCGGGGGCG Direct Gain 0 0.949811096732511 0 0.874445974826813 prediction 0.899622193465023 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554107 chr11:62554107 nonsynonymous SNV 0.248 1 21 hPsi_associated_SNPs_106435 0 0 1 0 0 Ribosome 0 0.438718565988339 0.748891949653626 0 hPsi_site_5395 iPseU_CNN:0.748891949653626;iRNA_PseU:0 5396 chr22 51222465 51222465 1 + G A rs555358604 51222465 - 51222445 51222485 41 GAACCTCTCTTCTCCACAGGCACATGGGCGGCGTACCTGCT GAACCTCTCTTCTCCACAGGTACATGGGCGGCGTACCTGCT Direct Gain 0 0.9498100870598 0 0.99893319606781 prediction 0.899620174119601 Functional Gain - RPL23AP82 ENSG00000184319 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:51222465 chr22:51222465 . . 0 21 hPsi_associated_SNPs_106436 0 0 0 0 0 unknown 0 0.43871863960627 0.99786639213562 0 hPsi_site_5396 iPseU_CNN:0.99786639213562;iRNA_PseU:0 5397 chr16 24921703 24921703 1 + C T rs116112035 24921703 + 24921683 24921723 41 ACCACCAGCAGCTCCCTTGTCTCTTACCCTCTCTCAGAACG ACCACCAGCAGCTCCCTTGTTTCTTACCCTCTCTCAGAACG Direct Gain 0 0.9497864718671 0 0.999269604682922 prediction 0.8995729437342 Functional Gain - SLC5A11 ENSG00000158865 CDS Human protein_coding chr16:24921703 chr16:24921703 nonsynonymous SNV 0.010 1 21 hPsi_associated_SNPs_106437 0 0 0 0 2 exosome 0 0.438715264707309 0.998539209365844 0 hPsi_site_5397 iPseU_CNN:0.998539209365844;iRNA_PseU:0 5398 chr2 75185871 75185871 1 + C T TGCT 75185871 + 75185851 75185891 41 GGAGGGACCTGCTGGGGAGGCAGCGGCCTCGCAGCCCCAGG GGAGGGACCTGCTGGGGAGGTAGCGGCCTCGCAGCCCCAGG Direct Gain 0 0.949785678223255 0 0.998759746551514 prediction 0.899571356446511 Functional Gain - POLE4 ENSG00000115350 CDS Human protein_coding chr2:75185871 chr2:75185871 nonsynonymous SNV 0.077 1 21 hPsi_associated_SNPs_106438 0 0 1 0 0 Ribosome 0 0.438719876211926 0.997519493103028 0 hPsi_site_5398 iPseU_CNN:0.997519493103028;iRNA_PseU:0 5399 chr20 18296770 18296770 1 + C T rs115173830 18296770 + 18296750 18296790 41 TTCAGCCAGAATTCAACCCTCATCTCTCACAGGCGGACACA TTCAGCCAGAATTCAACCCTTATCTCTCACAGGCGGACACA Direct Gain 0 0.949769012930978 0 0.989191114902496 prediction 0.899538025861957 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296770 chr20:18296770 synonymous SNV . 0 21 hPsi_associated_SNPs_106439 0 0 1 0 0 Cytosol 0 0.438719681882371 0.978382229804992 0 hPsi_site_5399 iPseU_CNN:0.978382229804992;iRNA_PseU:0 5400 chr1 43893249 43893249 1 + T A UCEC 43893249 - 43893229 43893269 41 GACGCCCAGCGTAAGCCTGTAAGTCTCGACGGAATGGTGGA GACGCCCAGCGTAAGCCTGTTAGTCTCGACGGAATGGTGGA Direct Gain 0 0.949767521817218 0 0.999985754489899 prediction 0.899535043634436 Functional Gain - SZT2 ENSG00000198198 CDS Human protein_coding chr1:43893249 chr1:43893249 stopgain 0.974 0 21 hPsi_associated_SNPs_106440 0 0 0 0 0 Cytosol 0 0.438693860111186 0.999971508979798 0 hPsi_site_5400 iPseU_CNN:0.999971508979798;iRNA_PseU:0 5401 chr3 49059908 49059908 1 + G A BLCA 49059908 - 49059888 49059928 41 AGCACGCGGTTTCCGTTTATCATGAAGCCGCGGCTGTTGTA AGCACGCGGTTTCCGTTTATTATGAAGCCGCGGCTGTTGTA Direct Gain 0 0.94976649916321 0 0.999553740024567 prediction 0.899532998326419 Functional Gain - NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49059908 chr3:49059908 nonsynonymous SNV 0.814 0 21 hPsi_associated_SNPs_106441 0 0 0 0 0 Ribosome 0 0.438716535736063 0.999107480049134 0 hPsi_site_5401 iPseU_CNN:0.999107480049134;iRNA_PseU:0 5402 chr11 118959935 118959935 1 + G T UCEC 118959935 + 118959915 118959955 41 TCTGTCCGGCAGATTGGAGAGAAAAGCCTGTTTACCAAGGA TCTGTCCGGCAGATTGGAGATAAAAGCCTGTTTACCAAGGA Direct Gain 0 0.949766246517043 0 0.980329513549805 prediction 0.899532493034085 Functional Gain - HMBS ENSG00000256269 CDS Human protein_coding chr11:118959935 chr11:118959935 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106442 0 0 1 0 2 Cytosol 0 0.439129562831185 0.96065902709961 0 hPsi_site_5402 iPseU_CNN:0.96065902709961;iRNA_PseU:0 5403 chr16 11771706 11771706 1 + C T rs1050049 11771706 + 11771686 11771726 41 CCTCCTGCTCAGACTAAAGGCACCTCCTCTGGCCTCACCCA CCTCCTGCTCAGACTAAAGGTACCTCCTCTGGCCTCACCCA Direct Gain 0 0.949764875590826 0 0.979630589485168 prediction 0.899529751181651 Functional Gain - SNN ENSG00000184602 UTR3 Human protein_coding chr16:11771706 chr16:11771706 . . 0 21 hPsi_associated_SNPs_106443 0 0 0 0 0 Ribosome 0 0.43871859314529 0.959261178970336 0 hPsi_site_5403 iPseU_CNN:0.959261178970336;iRNA_PseU:0 5404 chr1 29611340 29611340 1 + C T LGG 29611340 + 29611320 29611360 41 GCAGGGGGGCTTGCTGTCCTCATCCTTCTCCTGGGTGCCAT GCAGGGGGGCTTGCTGTCCTTATCCTTCTCCTGGGTGCCAT Direct Gain 0 0.949764483165891 0 0.99739933013916 prediction 0.899528966331782 Functional Gain - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29611340 chr1:29611340 synonymous SNV . 0 21 hPsi_associated_SNPs_106444 0 0 0 0 1 Endoplasmic reticulum 0 0.43871859299328 0.99479866027832 0 hPsi_site_5404 iPseU_CNN:0.99479866027832;iRNA_PseU:0 5405 chr12 113629143 113629143 1 + G A STAD 113629143 - 113629123 113629163 41 GGAGCCAAACAGCGACTCATCACAGTAAGACGGGGTGTGGC GGAGCCAAACAGCGACTCATTACAGTAAGACGGGGTGTGGC Direct Gain 0 0.949760682546651 0 0.956061959266663 prediction 0.899521365093302 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629143 chr12:113629143 nonsynonymous SNV 0.993 4 21 hPsi_associated_SNPs_106445 0 0 0 0 0 Ribosome 0 0.438718592994832 0.912123918533326 0 hPsi_site_5405 iPseU_CNN:0.912123918533326;iRNA_PseU:0 5406 chr1 162353415 162353415 1 + C T LIHC 162353415 + 162353395 162353435 41 TGGCAGCCCCCCTCCTCAGGCACGGACCTCCAGCCTCGACA TGGCAGCCCCCCTCCTCAGGTACGGACCTCCAGCCTCGACA Direct Gain 0 0.94976051977741 0 0.999782681465149 prediction 0.89952103955482 Functional Gain - C1orf226 ENSG00000239887 CDS Human protein_coding chr1:162353415 chr1:162353415 nonsynonymous SNV 0.754 1 21 hPsi_associated_SNPs_106446 0 0 0 0 0 nucleus 0 0.438719297306351 0.999565362930298 0 hPsi_site_5406 iPseU_CNN:0.999565362930298;iRNA_PseU:0 5407 chr18 14851920 14851920 1 + G T rs142686832 14851920 + 14851900 14851940 41 ACTTGCTTTCCACAGTGCAGGAGATGCTCCTTTGCAAGGAA ACTTGCTTTCCACAGTGCAGTAGATGCTCCTTTGCAAGGAA Direct Gain 0 0.949750154529805 0 0.992064893245697 prediction 0.899500309059611 Functional Gain - ANKRD30B ENSG00000180777 CDS Human protein_coding chr18:14851920 chr18:14851920 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_106447 0 0 0 0 0 exosome 0 0.43873871141096 0.984129786491394 0 hPsi_site_5407 iPseU_CNN:0.984129786491394;iRNA_PseU:0 5408 chrX 117773523 117773523 1 + C T UCEC 117773523 + 117773503 117773543 41 TCTTAGTAGCCTAGAAAGTTCATTTACACTTAATCACAGTA TCTTAGTAGCCTAGAAAGTTTATTTACACTTAATCACAGTA Direct Gain 0 0.949750118351804 0 0.0021851658821106 prediction 0.899500236703608 Functional Gain - DOCK11 ENSG00000147251 CDS Human protein_coding chrX:117773523 chrX:117773523 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_106448 0 0 0 0 1 Cytosol 0 0.438798127084424 0 0 hPsi_site_5408 iPseU_CNN:0;iRNA_PseU:0 5409 chr9 45442038 45442038 1 + T A rs553532406 45442038 - 45442018 45442058 41 CCTCCGGAGACCGTCCTGGTAACTGCCCTGGCCAGGGCTGG CCTCCGGAGACCGTCCTGGTTACTGCCCTGGCCAGGGCTGG Direct Gain 0 0.949747803376416 0 0.418640226125717 prediction 0.899495606752831 Functional Gain - LOC102723709;FAM27E2 ENSG00000268578 upstream Human other chr9:45442038 chr9:45442038 . . 0 21 hPsi_associated_SNPs_106449 0 0 0 0 0 unknown 0 0.438939019832785 0 0 hPsi_site_5409 iPseU_CNN:0;iRNA_PseU:0 5410 chr9 103310147 103310147 1 + G T SARC 103310147 + 103310127 103310167 41 GTATAAAGCAAGAACAAATTGATATAAGGCATCTTGGTCAT GTATAAAGCAAGAACAAATTTATATAAGGCATCTTGGTCAT Direct Gain 0 0.949740002393326 0 0.388629734516144 prediction 0.899480004786653 Functional Gain - MSANTD3-TMEFF1;TMEFF1 ENSG00000241697;ENSG00000251349 CDS Human other chr9:103310147 chr9:103310147 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_106450 0 0 0 0 1 unknown 0 0.438718478459326 0 0 hPsi_site_5410 iPseU_CNN:0;iRNA_PseU:0 5411 chr3 138189775 138189775 1 + G T UCEC 138189775 + 138189755 138189795 41 CTGGAGGTCCCCCTGTGCCAGATCCTCCCCTATGCTGACCT CTGGAGGTCCCCCTGTGCCATATCCTCCCCTATGCTGACCT Direct Gain 0 0.949738484969856 0 0.470454037189484 prediction 0.899476969939712 Functional Gain - ESYT3 ENSG00000158220 CDS Human protein_coding chr3:138189775 chr3:138189775 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_106451 0 0 0 0 2 nucleoplasm 0 0.438717383531792 0 0 hPsi_site_5411 iPseU_CNN:0;iRNA_PseU:0 5412 chr19 57746697 57746697 1 + G T BLCA 57746697 + 57746677 57746717 41 CAGATACCAGCCCTTGGAGAGACTGCCCCTGGCCCAGATCC CAGATACCAGCCCTTGGAGATACTGCCCCTGGCCCAGATCC Direct Gain 0 0.949738338663151 0 0.795450687408447 prediction 0.899476677326303 Functional Gain - AURKC ENSG00000105146 CDS Human protein_coding chr19:57746697 chr19:57746697 nonsynonymous SNV 0.009 4 21 hPsi_associated_SNPs_106452 0 0 0 0 1 Cytosol 0 0.438718737369141 0.590901374816894 0 hPsi_site_5412 iPseU_CNN:0.590901374816894;iRNA_PseU:0 5413 chr1 28598956 28598956 1 + C T LGG 28598956 + 28598936 28598976 41 CTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCA CTGGCGCATCGGCCATGGCTTATCACCAAGGAACACATCCA Direct Gain 0 0.949732766484971 0 0.790447413921356 prediction 0.899465532969942 Functional Gain - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28598956 chr1:28598956 synonymous SNV . 0 21 hPsi_associated_SNPs_106453 0 0 1 0 1 Ribosome 0 0.438718668851169 0.580894827842712 0 hPsi_site_5413 iPseU_CNN:0.580894827842712;iRNA_PseU:0 5414 chr14 21792899 21792899 1 + G A LGG 21792899 - 21792879 21792919 41 GGCCTGGTGGATGTGCAGTTCAAAAAGATTCTCACCCTGAT GGCCTGGTGGATGTGCAGTTTAAAAAGATTCTCACCCTGAT Direct Gain 0 0.949732658451496 0 0.973503470420837 prediction 0.899465316902993 Functional Gain - RPGRIP1 ENSG00000092200 CDS Human protein_coding chr14:21792899 chr14:21792899 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_106454 0 0 0 0 0 chromatin 0 0.438717897406151 0.947006940841674 0 hPsi_site_5414 iPseU_CNN:0.947006940841674;iRNA_PseU:0 5415 chr10 91061883 91061883 1 + G A BLCA 91061883 - 91061863 91061903 41 CGAAGGGAAAATATTTACCTCATGGTTGCAGTGCAATTCTC CGAAGGGAAAATATTTACCTTATGGTTGCAGTGCAATTCTC Direct Gain 0 0.949732557695072 0 0.996656179428101 prediction 0.899465115390144 Functional Gain - IFIT2 ENSG00000119922 CDS Human protein_coding chr10:91061883 chr10:91061883 nonsynonymous SNV 0.969 1 21 hPsi_associated_SNPs_106455 0 0 0 0 0 exosome 0 0.43871859454398 0.993312358856202 0 hPsi_site_5415 iPseU_CNN:0.993312358856202;iRNA_PseU:0 5416 chr7 150163810 150163810 1 + G A CESC 150163810 - 150163790 150163830 41 AGGAGGAGCCGCAGTTCGGACATCTGGCAGCTCTGCTCTGA AGGAGGAGCCGCAGTTCGGATATCTGGCAGCTCTGCTCTGA Direct Gain 0 0.949727656014344 0 0.999992966651917 prediction 0.899455312028688 Functional Gain - GIMAP8 ENSG00000171115 CDS Human protein_coding chr7:150163810 chr7:150163810 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106456 0 0 0 0 0 cytosol 0 0.43884470731214 0.999985933303834 0 hPsi_site_5416 iPseU_CNN:0.999985933303834;iRNA_PseU:0 5417 chr12 1005644 1005644 1 + G A rs61736907 1005644 - 1005624 1005664 41 GGCTCTGACAGTTCAGGCTTCTCTTTCTTTGGTATCACAGC GGCTCTGACAGTTCAGGCTTTTCTTTCTTTGGTATCACAGC Direct Gain 0 0.949727150504444 0 0.448236107826233 prediction 0.899454301008887 Functional Gain - WNK1 ENSG00000060237 CDS Human protein_coding chr12:1005644 chr12:1005644 synonymous SNV . 0 21 hPsi_associated_SNPs_106457 2 0 0 0 0 Ribosome 0 0.437692394051382 0 0 hPsi_site_5417 iPseU_CNN:0;iRNA_PseU:0 5418 chr1 237038041 237038041 1 + C T LUAD 237038041 + 237038021 237038061 41 AATAGATATAATTGGCCTGTCAGGACTCATCACTCCTTCCC AATAGATATAATTGGCCTGTTAGGACTCATCACTCCTTCCC Direct Gain 0 0.949725811703345 0 0.101424992084503 prediction 0.89945162340669 Functional Gain - MTR ENSG00000116984 CDS Human protein_coding chr1:237038041 chr1:237038041 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_106458 0 0 1 0 1 Nucleus 0 0.438721194253523 0 0 hPsi_site_5418 iPseU_CNN:0;iRNA_PseU:0 5419 chr10 114177628 114177628 1 + G A UCEC 114177628 - 114177608 114177648 41 GGCAGCTCCAGTGACAATTACACGAACCCTTCCGCCCAGGC GGCAGCTCCAGTGACAATTATACGAACCCTTCCGCCCAGGC Direct Gain 0 0.949724900442645 0 0.999999523162842 prediction 0.89944980088529 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114177628 chr10:114177628 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106459 0 0 0 0 0 Ribosome 0 0.438718619237772 0.999999046325684 0 hPsi_site_5419 iPseU_CNN:0.999999046325684;iRNA_PseU:0 5420 chrX 128674794 128674794 1 + A T LUSC 128674794 + 128674774 128674814 41 CCTAGCCCAGAGGAACGGGCAATATGAGTAAGTAACCACCT CCTAGCCCAGAGGAACGGGCTATATGAGTAAGTAACCACCT Direct Gain 0 0.949719582615321 0 0.999996304512024 prediction 0.899439165230641 Functional Gain - OCRL ENSG00000122126 CDS Human protein_coding chrX:128674794 chrX:128674794 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_106460 0 0 1 0 1 Cytosol 0 0.438669611184342 0.999992609024048 0 hPsi_site_5420 iPseU_CNN:0.999992609024048;iRNA_PseU:0 5421 chr11 70281143 70281143 1 + G A BLCA 70281143 - 70281123 70281163 41 ATCAGGGTCAAATGAGATCTCATCATCGCCCGCTGGGGAAG ATCAGGGTCAAATGAGATCTTATCATCGCCCGCTGGGGAAG Direct Gain 0 0.949719321709283 0 0.995492815971375 prediction 0.899438643418566 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281143 chr11:70281143 nonsynonymous SNV 0.960 4 21 hPsi_associated_SNPs_106461 0 0 0 0 0 Ribosome 0 0.438294673483399 0.99098563194275 0 hPsi_site_5421 iPseU_CNN:0.99098563194275;iRNA_PseU:0 5422 chr1 158815601 158815601 1 + C A LUAD 158815601 - 158815581 158815621 41 GAGTAATCAGATATGGTAATGACCTTCTTCCTTACAAATTT GAGTAATCAGATATGGTAATTACCTTCTTCCTTACAAATTT Direct Gain 0 0.94971870611604 0 0.99987119436264 prediction 0.899437412232081 Functional Gain - MNDA ENSG00000163563 CDS Human protein_coding chr1:158815601 chr1:158815601 synonymous SNV . 0 21 hPsi_associated_SNPs_106462 0 0 0 0 0 exosome 0 0.438718592983857 0.99974238872528 0 hPsi_site_5422 iPseU_CNN:0.99974238872528;iRNA_PseU:0 5423 chr17 65942142 65942142 1 + C A OV 65942142 - 65942122 65942162 41 AGAGAGAACCTGGACTTGTTGTTGCAGCTGAGGCACAGCAA AGAGAGAACCTGGACTTGTTTTTGCAGCTGAGGCACAGCAA Direct Gain 0 0.949717859570862 0 0.422017276287079 prediction 0.899435719141724 Functional Gain - BPTF ENSG00000171634 CDS Human protein_coding chr17:65942142 chr17:65942142 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106463 0 0 0 0 0 Cytosol 0 0.438810903770534 0 0 hPsi_site_5423 iPseU_CNN:0;iRNA_PseU:0 5424 chr19 57840009 57840009 1 + G A OV 57840009 - 57839989 57840029 41 CACTCCATGCACTTATAGGGCTTCTCCCCAGTGTGGATAAT CACTCCATGCACTTATAGGGTTTCTCCCCAGTGTGGATAAT Direct Gain 0 0.949713678528716 0 0.699775218963623 prediction 0.899427357057432 Functional Gain - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57840009 chr19:57840009 synonymous SNV . 0 21 hPsi_associated_SNPs_106464 0 0 0 0 0 Nucleus 0 0.438718592995102 0.399550437927246 0 hPsi_site_5424 iPseU_CNN:0.399550437927246;iRNA_PseU:0 5425 chr9 131250230 131250230 1 + G T BLCA 131250230 + 131250210 131250250 41 AGAAGATGCGGGAAGACCGGGATAGCCTGGTGGAGAGACTA AGAAGATGCGGGAAGACCGGTATAGCCTGGTGGAGAGACTA Direct Gain 0 0.94970861337823 0 0.170703917741776 prediction 0.89941722675646 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131250230 chr9:131250230 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106465 0 0 1 0 2 Cytosol 0 0.438718592995102 0 0 hPsi_site_5425 iPseU_CNN:0;iRNA_PseU:0 5426 chr11 130067757 130067757 1 + G A UCEC 130067757 - 130067737 130067777 41 GGATACACCGCCCCGTGCGGCACGTGAACTGCCCCGGGCAT GGATACACCGCCCCGTGCGGTACGTGAACTGCCCCGGGCAT Direct Gain 0 0.949705325850223 0 0.999999284744263 prediction 0.899410651700446 Functional Gain - ST14 ENSG00000149418 CDS Human protein_coding chr11:130067757 chr11:130067757 nonsynonymous SNV 0.008 5 21 hPsi_associated_SNPs_106466 0 0 0 0 0 Ribosome 0 0.439852048343729 0.999998569488526 0 hPsi_site_5426 iPseU_CNN:0.999998569488526;iRNA_PseU:0 5427 chr15 90167312 90167312 1 + C T rs138024656 90167312 + 90167292 90167332 41 CCTCCGAGAGCAGCAGCCTTCATGGGCACGCCTCAGAATCA CCTCCGAGAGCAGCAGCCTTTATGGGCACGCCTCAGAATCA Direct Gain 0 0.949704479604245 0 0.995136380195618 prediction 0.899408959208489 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90167312 chr15:90167312 synonymous SNV . 0 21 hPsi_associated_SNPs_106467 0 0 1 0 0 chromatin 0 0.438716568368443 0.990272760391236 0 hPsi_site_5427 iPseU_CNN:0.990272760391236;iRNA_PseU:0 5428 chrX 47103906 47103906 1 + G T LUAD 47103906 + 47103886 47103926 41 CTCTGTTGCAGACGCTACGTGACCAAACCCAACTCAGATGA CTCTGTTGCAGACGCTACGTTACCAAACCCAACTCAGATGA Direct Gain 0 0.949702517373647 0 0.13849800825119 prediction 0.899405034747293 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47103906 chrX:47103906 synonymous SNV . 0 21 hPsi_associated_SNPs_106468 0 0 1 0 2 cytosol 0 0.40257077782095 0 0 hPsi_site_5428 iPseU_CNN:0;iRNA_PseU:0 5429 chr5 63509514 63509514 1 + G T COAD 63509514 + 63509494 63509534 41 ATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGCA ATCTCTCCAAGAGCCGGACTTATTATCAGCCAACACAGGCA Direct Gain 0 0.949689635527365 0 0.0246430933475494 prediction 0.899379271054729 Functional Gain - RNF180 ENSG00000164197 CDS Human protein_coding chr5:63509514 chr5:63509514 nonsynonymous SNV 0.977 4 21 hPsi_associated_SNPs_106469 0 0 0 0 0 nucleus 0 0.438718569956444 0 0 hPsi_site_5429 iPseU_CNN:0;iRNA_PseU:0 5430 chr22 22663759 22663759 1 + G A ESCA 22663759 - 22663739 22663779 41 GCAGCCCAGATCCTTTTACTCAGATGCATGCACTTAGAACA GCAGCCCAGATCCTTTTACTTAGATGCATGCACTTAGAACA Direct Gain 0 0.949686061273497 0 0.00524038076400757 prediction 0.899372122546993 Functional Gain - BMS1P20 ENSG00000236850;ENSG00000272779 ncRNA_intronic Human other chr22:22663759 chr22:22663759 . . 0 21 hPsi_associated_SNPs_106470 0 0 0 0 0 unknown 0 0.438720146530604 0 0 hPsi_site_5430 iPseU_CNN:0;iRNA_PseU:0 5431 chr6 22570014 22570014 1 + C A STAD 22570014 - 22569994 22570034 41 GCGCTGAAGCCGCGCCTCTTGTTGGGCTTGCCGAACTTCTC GCGCTGAAGCCGCGCCTCTTTTTGGGCTTGCCGAACTTCTC Direct Gain 0 0.949680307039686 0 0.997051239013672 prediction 0.899360614079373 Functional Gain - HDGFL1 ENSG00000112273 CDS Human protein_coding chr6:22570014 chr6:22570014 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_106471 0 0 0 0 0 unknown 0 0.438701697667795 0.994102478027344 0 hPsi_site_5431 iPseU_CNN:0.994102478027344;iRNA_PseU:0 5432 chr16 24580152 24580152 1 + C T SKCM 24580152 + 24580132 24580172 41 TGGTTCAACACGTTCACGCTCTTATTCTCGATCATTCAGCC TGGTTCAACACGTTCACGCTTTTATTCTCGATCATTCAGCC Direct Gain 0 0.949679402211174 0 0.996884822845459 prediction 0.899358804422348 Functional Gain - RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580152 chr16:24580152 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_106472 0 0 1 0 1 Cytosol 0 0.438713387499477 0.993769645690918 0 hPsi_site_5432 iPseU_CNN:0.993769645690918;iRNA_PseU:0 5433 chr16 74425781 74425781 1 + G A UCEC 74425781 - 74425761 74425801 41 CTTGGGCGATTGTTCCACCTCATCCGCCCTCCGCCTCTTGG CTTGGGCGATTGTTCCACCTTATCCGCCCTCCGCCTCTTGG Direct Gain 0 0.949673337524389 0 0.335467368364334 prediction 0.899346675048778 Functional Gain - NPIPB15 ENSG00000196436 CDS Human protein_coding chr16:74425781 chr16:74425781 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_106473 0 0 0 0 0 Endoplasmic reticulum 0 0.438719411857167 0 0 hPsi_site_5433 iPseU_CNN:0;iRNA_PseU:0 5434 chr19 49377076 49377076 1 + G A BLCA 49377076 - 49377056 49377096 41 TTCTTTCTTTACAGCTTCTTCATCGTCCTCCTCCTCCACGG TTCTTTCTTTACAGCTTCTTTATCGTCCTCCTCCTCCACGG Direct Gain 0 0.949665971870843 0 0.54244989156723 prediction 0.899331943741687 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377076 chr19:49377076 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_106474 0 0 0 0 0 Cytosol 0 0.438718592995104 0.08489978313446 0 hPsi_site_5434 iPseU_CNN:0.08489978313446;iRNA_PseU:0 5435 chr2 185801309 185801309 1 + C A LUSC 185801309 - 185801289 185801329 41 TGAAGGGGCCAATGTCTCGGGACCATTTTTATTTTCAACCT TGAAGGGGCCAATGTCTCGGTACCATTTTTATTTTCAACCT Direct Gain 0 0.949661175458898 0 0.763611435890198 prediction 0.899322350917796 Functional Gain - ZNF804A ENSG00000170396 CDS Human protein_coding chr2:185801309 chr2:185801309 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_106475 0 0 0 0 0 nucleoplasm 0 0.438718577873625 0.527222871780396 0 hPsi_site_5435 iPseU_CNN:0.527222871780396;iRNA_PseU:0 5436 chr13 96086142 96086142 1 + C T UCEC 96086142 + 96086122 96086162 41 GTGTCGGAGGGTTTGGAGCTCTCGTTGCTGCTACCACGTCC GTGTCGGAGGGTTTGGAGCTTTCGTTGCTGCTACCACGTCC Direct Gain 0 0.949660037058358 0 0.995944738388062 prediction 0.899320074116716 Functional Gain - CLDN10 ENSG00000134873 CDS Human protein_coding chr13:96086142 chr13:96086142 nonsynonymous SNV 0.948 2 21 hPsi_associated_SNPs_106476 0 0 0 0 0 Endoplasmic reticulum 0 0.438715330183788 0.991889476776124 0 hPsi_site_5436 iPseU_CNN:0.991889476776124;iRNA_PseU:0 5437 chr6 42141390 42141390 1 + G A CESC 42141390 - 42141370 42141410 41 TGGTGGCACTCGGTGCTGCTCAGCTCCTCCACTGACTTTCC TGGTGGCACTCGGTGCTGCTTAGCTCCTCCACTGACTTTCC Direct Gain 0 0.949657330893655 0 0.99999988079071 prediction 0.899314661787309 Functional Gain - GUCA1A ENSG00000048545 CDS Human protein_coding chr6:42141390 chr6:42141390 synonymous SNV . 0 21 hPsi_associated_SNPs_106477 0 0 0 0 0 Cytosol 0 0.438647631682199 0.99999976158142 0 hPsi_site_5437 iPseU_CNN:0.99999976158142;iRNA_PseU:0 5438 chr19 48343624 48343624 1 + A T rs3848536 48343624 + 48343604 48343644 41 AGCAGGTAGGGGGGCTTGATAACTTAACTTTCCACGTGGAC AGCAGGTAGGGGGGCTTGATTACTTAACTTTCCACGTGGAC Direct Gain 0 0.949643725545194 0 0.998088955879211 prediction 0.899287451090389 Functional Gain - CRX ENSG00000105392 UTR3 Human protein_coding chr19:48343624 chr19:48343624 . . 0 21 hPsi_associated_SNPs_106478 3 0 0 0 0 Nucleus 0 0.438718593301243 0.996177911758422 0 hPsi_site_5438 iPseU_CNN:0.996177911758422;iRNA_PseU:0 5439 chr19 52828590 52828590 1 + A T rs143593493 52828590 + 52828570 52828610 41 TGCTGGTGGGAATGTAAATTAATTCAGCCATTGTGGAAAGC TGCTGGTGGGAATGTAAATTTATTCAGCCATTGTGGAAAGC Direct Gain 0 0.949640732560537 0 0.587640762329102 prediction 0.899281465121075 Functional Gain - ZNF480 ENSG00000269535 ncRNA_intronic Human antisense chr19:52828590 chr19:52828590 . . 0 21 hPsi_associated_SNPs_106479 0 0 0 0 0 Cytosol 0 0.438718593008986 0.175281524658204 0 hPsi_site_5439 iPseU_CNN:0.175281524658204;iRNA_PseU:0 5440 chr8 142204309 142204309 1 + G A LUSC 142204309 - 142204289 142204329 41 TTCGCCTTTCCAAATGGCGACTTTCCCCTCCTCCCTGCCCG TTCGCCTTTCCAAATGGCGATTTTCCCCTCCTCCCTGCCCG Direct Gain 0 0.949636700944218 0 0.999913513660431 prediction 0.899273401888436 Functional Gain - DENND3 ENSG00000105339 CDS Human protein_coding chr8:142204309 chr8:142204309 nonsynonymous SNV 0.564 0 21 hPsi_associated_SNPs_106480 0 0 0 0 0 Nucleus 0 0.438718592846425 0.999827027320862 0 hPsi_site_5440 iPseU_CNN:0.999827027320862;iRNA_PseU:0 5441 chr12 132549258 132549258 1 + C T UCEC 132549258 + 132549238 132549278 41 AGAAACTGCAGATGCCCCCGCAGCCCCCACCGCCACAGGCC AGAAACTGCAGATGCCCCCGTAGCCCCCACCGCCACAGGCC Direct Gain 0 0.949634389741862 0 0.0147476196289062 prediction 0.899268779483723 Functional Gain - EP400 ENSG00000183495 CDS Human protein_coding chr12:132549258 chr12:132549258 stopgain 0.021 0 21 hPsi_associated_SNPs_106481 0 0 1 0 1 Cytosol 0 0.438718590174544 0 0 hPsi_site_5441 iPseU_CNN:0;iRNA_PseU:0 5442 chr11 122430682 122430682 1 + C A rs11493813 122430682 - 122430662 122430702 41 GACCCTCAGATTAAAAGTCTGATGCTCTACCAACTGAGCTA GACCCTCAGATTAAAAGTCTTATGCTCTACCAACTGAGCTA Direct Gain 0 0.94962204748332 0 0.916636228561401 prediction 0.899244094966639 Functional Gain - MIR100HG;UBASH3B ENSG00000253035;ENSG00000223265 intergenic Human other chr11:122430682 chr11:122430682 . . 0 21 hPsi_associated_SNPs_106482 0 0 0 0 0 unknown 0 0.438718591379321 0.833272457122802 0 hPsi_site_5442 iPseU_CNN:0.833272457122802;iRNA_PseU:0 5443 chr4 89318055 89318055 1 + C T LAML 89318055 + 89318035 89318075 41 GTCAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGC GTCAGGTGGTATCTTTTGGTTATGGACCAAGTGACACAAGC Direct Gain 0 0.949620599615795 0 0.999951481819153 prediction 0.899241199231589 Functional Gain - HERC6 ENSG00000138642 CDS Human protein_coding chr4:89318055 chr4:89318055 nonsynonymous SNV 0.128 0 21 hPsi_associated_SNPs_106483 0 0 0 1 2 Cytosol 0 0.438564923035451 0.999902963638306 0 hPsi_site_5443 iPseU_CNN:0.999902963638306;iRNA_PseU:0 5444 chr13 26594812 26594812 1 + C T rs138967477 26594812 + 26594792 26594832 41 GCCGCCGTGTCCAGGCGCCCCTCACCCCCACACCTGCTGCA GCCGCCGTGTCCAGGCGCCCTTCACCCCCACACCTGCTGCA Direct Gain 0 0.949613394131103 0 0.273094654083252 prediction 0.899226788262205 Functional Gain - ATP8A2 ENSG00000132932 UTR3 Human protein_coding chr13:26594812 chr13:26594812 . . 0 21 hPsi_associated_SNPs_106484 0 0 0 0 0 unknown 0 0.438718616621574 0 0 hPsi_site_5444 iPseU_CNN:0;iRNA_PseU:0 5445 chr7 149545191 149545191 1 + C T COAD 149545191 + 149545171 149545211 41 AAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGA AAGGCCCACATGTTCTGTGTTAATGCCTTGGCAGCGAGGGA Direct Gain 0 0.949609855257348 0 0.403004348278046 prediction 0.899219710514696 Functional Gain - ZNF862 ENSG00000106479 CDS Human protein_coding chr7:149545191 chr7:149545191 synonymous SNV . 0 21 hPsi_associated_SNPs_106485 0 0 0 0 0 exosome 0 0.438700394923888 0 0 hPsi_site_5445 iPseU_CNN:0;iRNA_PseU:0 5446 chr4 78085963 78085963 1 + T A rs4150090 78085963 - 78085943 78085983 41 GTGCAGTGGCTCACACCTGTAATCTCAGCACTTCGGAGGCT GTGCAGTGGCTCACACCTGTTATCTCAGCACTTCGGAGGCT Direct Gain 0 0.949605192749385 0 0.994861006736755 prediction 0.899210385498769 Functional Gain - CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78085963 chr4:78085963 . . 0 21 hPsi_associated_SNPs_106486 0 0 0 0 0 Ribosome 0 0.438817942898472 0.98972201347351 0 hPsi_site_5446 iPseU_CNN:0.98972201347351;iRNA_PseU:0 5447 chr19 1301033 1301033 1 + C T rs543113444 1301033 + 1301013 1301053 41 AATAAGCTCGTGTCGTCTGTCAGAGCCCCTCTCTCAACTCT AATAAGCTCGTGTCGTCTGTTAGAGCCCCTCTCTCAACTCT Direct Gain 0 0.949602513286396 0 0.965815424919128 prediction 0.899205026572791 Functional Gain - EFNA2 ENSG00000099617 UTR3 Human protein_coding chr19:1301033 chr19:1301033 . . 0 21 hPsi_associated_SNPs_106487 0 0 1 0 0 exosome 0 0.438718409519678 0.931630849838256 0 hPsi_site_5447 iPseU_CNN:0.931630849838256;iRNA_PseU:0 5448 chr13 28241287 28241287 1 + G A rs9273 28241287 - 28241267 28241307 41 TGGATCAAGAATGACTTGGGCTTGTCACTCCCTAGCAGGCT TGGATCAAGAATGACTTGGGTTTGTCACTCCCTAGCAGGCT Direct Gain 0 0.949602302510952 0 0.726220786571503 prediction 0.899204605021904 Functional Gain - POLR1D ENSG00000186184 UTR3 Human protein_coding chr13:28241287 chr13:28241287 . . 0 21 hPsi_associated_SNPs_106488 0 0 0 0 0 Ribosome 0 0.438717717078203 0.452441573143006 0 hPsi_site_5448 iPseU_CNN:0.452441573143006;iRNA_PseU:0 5449 chr2 98852898 98852898 1 + C T LUSC 98852898 + 98852878 98852918 41 GTGGCTGGATGACAAATCGTCAGAAAAGGTGACGCGAGAAG GTGGCTGGATGACAAATCGTTAGAAAAGGTGACGCGAGAAG Direct Gain 0 0.949598320628266 0 0.999063968658447 prediction 0.899196641256533 Functional Gain - VWA3B ENSG00000168658 CDS Human protein_coding chr2:98852898 chr2:98852898 nonsynonymous SNV 0.011 0 21 hPsi_associated_SNPs_106489 0 0 0 0 2 exosome 0 0.438718585361927 0.998127937316894 0 hPsi_site_5449 iPseU_CNN:0.998127937316894;iRNA_PseU:0 5450 chrX 7811973 7811973 1 + G A UCEC 7811973 - 7811953 7811993 41 TGACTCAGTGGTTCTTCCATCTCGCTCTCCTGACTCAGTGG TGACTCAGTGGTTCTTCCATTTCGCTCTCCTGACTCAGTGG Direct Gain 0 0.949597994429992 0 0.605480194091797 prediction 0.899195988859985 Functional Gain - VCX ENSG00000182583 CDS Human protein_coding chrX:7811973 chrX:7811973 synonymous SNV . 0 21 hPsi_associated_SNPs_106490 0 0 0 0 0 unknown 0 0.439591229665312 0.210960388183594 0 hPsi_site_5450 iPseU_CNN:0.210960388183594;iRNA_PseU:0 5451 chr16 83520231 83520231 1 + G T LUAD 83520231 + 83520211 83520251 41 AGAAAGGAGACATTGTCACTGTTGTGTCACCTGCGCTGCTG AGAAAGGAGACATTGTCACTTTTGTGTCACCTGCGCTGCTG Direct Gain 0 0.949595528096093 0 0.99921989440918 prediction 0.899191056192187 Functional Gain - CDH13 ENSG00000140945 CDS Human protein_coding chr16:83520231 chr16:83520231 nonsynonymous SNV 0.860 3 21 hPsi_associated_SNPs_106491 0 0 0 0 1 Nucleus 0 0.439403207740447 0.99843978881836 0 hPsi_site_5451 iPseU_CNN:0.99843978881836;iRNA_PseU:0 5452 chr5 5239924 5239924 1 + G A SKCM 5239924 - 5239904 5239944 41 TTGTACCGGCCGGGCCAGTCCACGGTCCAGTGCCCATTCAG TTGTACCGGCCGGGCCAGTCTACGGTCCAGTGCCCATTCAG Direct Gain 0 0.949586554743954 0 0.998620748519897 prediction 0.899173109487909 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5239924 chr5:5239924 synonymous SNV . 0 21 hPsi_associated_SNPs_106492 0 0 0 0 0 exosome 0 0.438781385814218 0.997241497039794 0 hPsi_site_5452 iPseU_CNN:0.997241497039794;iRNA_PseU:0 5453 chr2 97427777 97427777 1 + G T LUSC 97427777 + 97427757 97427797 41 CTGATGGAGATGTTGAAGGTGACGGAGCCCTATAATGACCT CTGATGGAGATGTTGAAGGTTACGGAGCCCTATAATGACCT Direct Gain 0 0.949581923251757 0 0.854645550251007 prediction 0.899163846503513 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97427777 chr2:97427777 synonymous SNV . 0 21 hPsi_associated_SNPs_106493 0 0 0 0 0 chromatin 0 0.438737441520604 0.709291100502014 0 hPsi_site_5453 iPseU_CNN:0.709291100502014;iRNA_PseU:0 5454 chr3 193855938 193855938 1 + C T UCEC 193855938 + 193855918 193855958 41 GTCTACACCAGCAACAGCGGCACCTCCGTGGGCCCCAACGC GTCTACACCAGCAACAGCGGTACCTCCGTGGGCCCCAACGC Direct Gain 0 0.949557374152546 0 1 prediction 0.899114748305093 Functional Gain - HES1 ENSG00000114315 CDS Human protein_coding chr3:193855938 chr3:193855938 synonymous SNV . 0 21 hPsi_associated_SNPs_106494 0 0 1 0 0 Cytosol 0 0.438546880797079 1 0 hPsi_site_5454 iPseU_CNN:1;iRNA_PseU:0 5455 chr2 3627648 3627648 1 + G A rs7576238 3627648 - 3627628 3627668 41 AGCAACGCCTGCCCTCTGGGCAACTCCAGAGGGCACCTCTT AGCAACGCCTGCCCTCTGGGTAACTCCAGAGGGCACCTCTT Direct Gain 0 0.949555885902573 0 0.999982535839081 prediction 0.899111771805145 Functional Gain - RPS7 ENSG00000171863 intronic Human protein_coding chr2:3627648 chr2:3627648 . . 0 21 hPsi_associated_SNPs_106495 0 0 0 0 0 Nucleus 0 0.438718593052523 0.999965071678162 0 hPsi_site_5455 iPseU_CNN:0.999965071678162;iRNA_PseU:0 5456 chr9 131008703 131008703 1 + G T SARC 131008703 + 131008683 131008723 41 AGAAATACATGCTGTCTGTGGACAACCTCAAGCTGCGGGAC AGAAATACATGCTGTCTGTGTACAACCTCAAGCTGCGGGAC Direct Gain 0 0.94955362052211 0 0.999999046325684 prediction 0.89910724104422 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131008703 chr9:131008703 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106496 0 0 1 0 2 Endoplasmic reticulum 0 0.438733085408478 0.999998092651368 0 hPsi_site_5456 iPseU_CNN:0.999998092651368;iRNA_PseU:0 5457 chr4 86921774 86921774 1 + G T UCEC 86921774 + 86921754 86921794 41 AAGATGCCGAGAAAAGAAATGACATGCTACAGAAAGAAATG AAGATGCCGAGAAAAGAAATTACATGCTACAGAAAGAAATG Direct Gain 0 0.949552693941358 0 0.996051371097565 prediction 0.899105387882716 Functional Gain - ARHGAP24 ENSG00000138639 CDS Human protein_coding chr4:86921774 chr4:86921774 nonsynonymous SNV 0.978 1 21 hPsi_associated_SNPs_106497 0 0 0 0 0 Cytosol 0 0.438718592858271 0.99210274219513 0 hPsi_site_5457 iPseU_CNN:0.99210274219513;iRNA_PseU:0 5458 chr12 66700234 66700234 1 + G T UCEC 66700234 + 66700214 66700254 41 ATAGGGTCAGGTTCTAAAGAGATGTTGAAAGAGATAGAAGA ATAGGGTCAGGTTCTAAAGATATGTTGAAAGAGATAGAAGA Direct Gain 0 0.949549979937797 0 0.867748856544495 prediction 0.899099959875595 Functional Gain - HELB ENSG00000127311 CDS Human protein_coding chr12:66700234 chr12:66700234 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_106498 0 0 0 0 1 nucleus 0 0.438726124273478 0.73549771308899 0 hPsi_site_5458 iPseU_CNN:0.73549771308899;iRNA_PseU:0 5459 chr7 64649471 64649471 1 + C T UCEC 64649471 + 64649451 64649491 41 GGAGTGTGTAGTCTTCAGCACTTGGACCCTCAGGGAGCCCA GGAGTGTGTAGTCTTCAGCATTTGGACCCTCAGGGAGCCCA Direct Gain 0 0.949544891129964 0 0.999470591545105 prediction 0.899089782259928 Functional Gain - INTS4P1 ENSG00000164669 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64649471 chr7:64649471 . . 0 21 hPsi_associated_SNPs_106499 0 0 0 0 1 unknown 0 0.438718592993984 0.99894118309021 0 hPsi_site_5459 iPseU_CNN:0.99894118309021;iRNA_PseU:0 5460 chr1 228362306 228362306 1 + G A rs74931164 228362306 - 228362286 228362326 41 GGGAGCGCGCCTTACCCGGGCAGAGGAGCACACCGTGGACC GGGAGCGCGCCTTACCCGGGTAGAGGAGCACACCGTGGACC Direct Gain 0 0.949542962491466 0 0.999544024467468 prediction 0.899085924982931 Functional Gain - IBA57 ENSG00000181873 UTR5 Human protein_coding chr1:228362306 chr1:228362306 . . 0 21 hPsi_associated_SNPs_106500 0 0 0 0 0 Ribosome 0 0.438723331325101 0.999088048934936 0 hPsi_site_5460 iPseU_CNN:0.999088048934936;iRNA_PseU:0 5461 chr8 77618855 77618855 1 + G T UCEC 77618855 + 77618835 77618875 41 AACCCTGCCGACCCTCAGCTGATGATCAATCCATTCCAGCT AACCCTGCCGACCCTCAGCTTATGATCAATCCATTCCAGCT Direct Gain 0 0.949532638936922 0 0.998181939125061 prediction 0.899065277873844 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77618855 chr8:77618855 synonymous SNV . 0 21 hPsi_associated_SNPs_106501 0 0 1 0 1 Ribosome 0 0.438718613674577 0.996363878250122 0 hPsi_site_5461 iPseU_CNN:0.996363878250122;iRNA_PseU:0 5462 chr1 120110043 120110043 1 + G A rs115859093 120110043 - 120110023 120110063 41 ACAGGCAGAGCATGGTGGCTCACACCTGTAATTCCATCATT ACAGGCAGAGCATGGTGGCTTACACCTGTAATTCCATCATT Direct Gain 0 0.949530005086301 0 0.999447822570801 prediction 0.899060010172601 Functional Gain - HSD3BP4 ENSG00000203855 ncRNA_intronic Human unprocessed_pseudogene chr1:120110043 chr1:120110043 . . 0 21 hPsi_associated_SNPs_106502 0 0 0 0 0 unknown 0 0.442810326850578 0.998895645141602 0 hPsi_site_5462 iPseU_CNN:0.998895645141602;iRNA_PseU:0 5463 chr3 14939498 14939498 1 + G A SKCM 14939498 - 14939478 14939518 41 GATGTGAGTGGCGTGGTGATCAAACCCCTGCTCCCGGGCCA GATGTGAGTGGCGTGGTGATTAAACCCCTGCTCCCGGGCCA Direct Gain 0 0.949524888183225 0 0.343399673700333 prediction 0.89904977636645 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14939498 chr3:14939498 nonsynonymous SNV 0.891 0 21 hPsi_associated_SNPs_106503 0 0 0 0 0 Cytosol 0 0.438720140178756 0 0 hPsi_site_5463 iPseU_CNN:0;iRNA_PseU:0 5464 chr1 179337977 179337977 1 + C T BLCA 179337977 + 179337957 179337997 41 AAAAAATATGGTGGATCGTTCAAAACTCCTTCCTACTTCCC AAAAAATATGGTGGATCGTTTAAAACTCCTTCCTACTTCCC Direct Gain 0 0.949524505093672 0 0.998815774917603 prediction 0.899049010187345 Functional Gain - AXDND1 ENSG00000162779 CDS Human protein_coding chr1:179337977 chr1:179337977 nonsynonymous SNV 0.020 0 21 hPsi_associated_SNPs_106504 0 0 0 0 0 cytosol 0 0.438718594050047 0.997631549835206 0 hPsi_site_5464 iPseU_CNN:0.997631549835206;iRNA_PseU:0 5465 chr1 151670766 151670766 1 + G A rs548742611 151670766 - 151670746 151670786 41 GAGCCCAGCCCAGAAGTTGGCAAATTCTGAGATAGGAGAGA GAGCCCAGCCCAGAAGTTGGTAAATTCTGAGATAGGAGAGA Direct Gain 0 0.949523648611101 0 0.0185019969940186 prediction 0.899047297222203 Functional Gain - SNX27 ENSG00000143376 UTR3 Human protein_coding chr1:151670766 chr1:151670766 . . 0 21 hPsi_associated_SNPs_106505 0 0 0 0 0 Ribosome 0 0.438718734067171 0 0 hPsi_site_5465 iPseU_CNN:0;iRNA_PseU:0 5466 chr20 826538 826538 1 + C T rs139279615 826538 + 826518 826558 41 GTTTTGTTCTTGGCTTTGGACACCTGAGAACCCCCTCCTCC GTTTTGTTCTTGGCTTTGGATACCTGAGAACCCCCTCCTCC Direct Gain 0 0.94951946192028 0 0.99999862909317 prediction 0.89903892384056 Functional Gain - FAM110A ENSG00000125898 UTR3 Human protein_coding chr20:826538 chr20:826538 . . 0 21 hPsi_associated_SNPs_106506 0 0 0 0 0 Cytosol 0 0.438718600459074 0.99999725818634 0 hPsi_site_5466 iPseU_CNN:0.99999725818634;iRNA_PseU:0 5467 chr10 106916918 106916918 1 + T A COAD 106916918 - 106916898 106916938 41 CCACCTTCTTGTTTGCCAGAAATATCCCTTTGATACCTGCT CCACCTTCTTGTTTGCCAGATATATCCCTTTGATACCTGCT Direct Gain 0 0.949518068528311 0 0.950912654399872 prediction 0.899036137056622 Functional Gain - SORCS3 ENSG00000156395 CDS Human protein_coding chr10:106916918 chr10:106916918 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106507 0 0 0 0 0 exosome 0 0.43873328755361 0.901825308799744 0 hPsi_site_5467 iPseU_CNN:0.901825308799744;iRNA_PseU:0 5468 chr1 205561360 205561360 1 + C T BLCA 205561360 + 205561340 205561380 41 GCAAGCCTGGGCCTGTTTCTCAGCAGCACCTTCCCCAGCAT GCAAGCCTGGGCCTGTTTCTTAGCAGCACCTTCCCCAGCAT Direct Gain 0 0.949513220764851 0 0.00198051333427429 prediction 0.899026441529702 Functional Gain - MFSD4A ENSG00000174514 CDS Human protein_coding chr1:205561360 chr1:205561360 synonymous SNV . 0 21 hPsi_associated_SNPs_106508 0 0 0 2 2 Nucleus 0 0.438716845748884 0 0 hPsi_site_5468 iPseU_CNN:0;iRNA_PseU:0 5469 chr14 100363551 100363551 1 + C T SKCM 100363551 + 100363531 100363571 41 ACGGGAGAGACCGTCTACTTCATCGCATCCGTGGTGGTGTT ACGGGAGAGACCGTCTACTTTATCGCATCCGTGGTGGTGTT Direct Gain 0 0.949508042626233 0 0.0742884576320648 prediction 0.899016085252466 Functional Gain - EML1 ENSG00000066629 CDS Human protein_coding chr14:100363551 chr14:100363551 synonymous SNV . 0 21 hPsi_associated_SNPs_106509 0 0 0 0 2 Nucleus 0 0.438571760290459 0 0 hPsi_site_5469 iPseU_CNN:0;iRNA_PseU:0 5470 chr5 38445672 38445672 1 + G A rs141381972 38445672 - 38445652 38445692 41 GAAGCCAGCCTTGTTTCTCTCACAAAGCTCTGCCCGAGAGT GAAGCCAGCCTTGTTTCTCTTACAAAGCTCTGCCCGAGAGT Direct Gain 0 0.949498813923001 0 0.947345495223999 prediction 0.898997627846002 Functional Gain - EGFLAM ENSG00000164318 UTR5 Human protein_coding chr5:38445672 chr5:38445672 . . 0 21 hPsi_associated_SNPs_106510 0 0 0 0 0 Cytosol 0 0.438718586649532 0.894690990447998 0 hPsi_site_5470 iPseU_CNN:0.894690990447998;iRNA_PseU:0 5471 chr7 154739773 154739773 1 + G A rs116455831 154739773 - 154739753 154739793 41 TGGGCGAGAATTTTGTGGGTCACACTTGCCACACTTCACGT TGGGCGAGAATTTTGTGGGTTACACTTGCCACACTTCACGT Direct Gain 0 0.949497648262182 0 0.999099135398865 prediction 0.898995296524365 Functional Gain - PAXIP1-AS2 ENSG00000214106 UTR3 Human antisense chr7:154739773 chr7:154739773 . . 0 21 hPsi_associated_SNPs_106511 0 0 1 0 0 unknown 0 0.438718287254652 0.99819827079773 0 hPsi_site_5471 iPseU_CNN:0.99819827079773;iRNA_PseU:0 5472 chr10 61007423 61007423 1 + C T UCEC 61007423 + 61007403 61007443 41 TGATGAGGACCTCTAATAGTCTCAGTTTGGCTTTTATGTGC TGATGAGGACCTCTAATAGTTTCAGTTTGGCTTTTATGTGC Direct Gain 0 0.949496114188999 0 0.747606456279755 prediction 0.898992228377998 Functional Gain - FAM13C ENSG00000148541 CDS Human protein_coding chr10:61007423 chr10:61007423 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106512 0 0 0 0 0 Cytosol 0 0.438721044645416 0.49521291255951 0 hPsi_site_5472 iPseU_CNN:0.49521291255951;iRNA_PseU:0 5473 chr11 55136025 55136025 1 + C T SKCM 55136025 + 55136005 55136045 41 GCTTGCACCAATACCTATGTCACTGGGCTTTCTATGATAGC GCTTGCACCAATACCTATGTTACTGGGCTTTCTATGATAGC Direct Gain 0 0.949495598921134 0 0.834929943084717 prediction 0.898991197842268 Functional Gain - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55136025 chr11:55136025 synonymous SNV . 0 21 hPsi_associated_SNPs_106513 0 0 0 0 0 unknown 0 0.43925701251023 0.669859886169434 0 hPsi_site_5473 iPseU_CNN:0.669859886169434;iRNA_PseU:0 5474 chr1 74670242 74670242 1 + G A LUSC 74670242 - 74670222 74670262 41 TTCTCCAATACTATAAAGTTCAATATCATCTGCACAGGTAA TTCTCCAATACTATAAAGTTTAATATCATCTGCACAGGTAA Direct Gain 0 0.949495377652363 0 0.000632584095001221 prediction 0.898990755304726 Functional Gain - FPGT ENSG00000254685 CDS Human protein_coding chr1:74670242 chr1:74670242 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_106514 0 0 0 0 0 Ribosome 0 0.438719653678268 0 0 hPsi_site_5474 iPseU_CNN:0;iRNA_PseU:0 5475 chr19 12087882 12087882 1 + G A rs111399037 12087882 - 12087862 12087902 41 CACTCCTCCTGGGTGAAGTTCACAGCAACATCCTCACAGGC CACTCCTCCTGGGTGAAGTTTACAGCAACATCCTCACAGGC Direct Gain 0 0.94949495509057 0 0.99985671043396 prediction 0.89898991018114 Functional Gain - ZNF763 ENSG00000197054;ENSG00000267179 CDS Human other chr19:12087882 chr19:12087882 synonymous SNV . 0 21 hPsi_associated_SNPs_106515 0 0 0 0 0 exosome 0 0.438718667991134 0.99971342086792 0 hPsi_site_5475 iPseU_CNN:0.99971342086792;iRNA_PseU:0 5476 chr19 2216711 2216711 1 + G A KIRP 2216711 - 2216691 2216731 41 GGCACCGTGTGGTCCTGGCTCAGGTGCCGCCTCAGCACAAT GGCACCGTGTGGTCCTGGCTTAGGTGCCGCCTCAGCACAAT Direct Gain 0 0.949494413283567 0 0.999894976615906 prediction 0.898988826567135 Functional Gain - DOT1L ENSG00000104885 CDS Human protein_coding chr19:2216711 chr19:2216711 synonymous SNV . 0 21 hPsi_associated_SNPs_106516 0 0 0 0 0 Cytosol 0 0.438718764918814 0.999789953231812 0 hPsi_site_5476 iPseU_CNN:0.999789953231812;iRNA_PseU:0 5477 chr11 55944440 55944440 1 + C A LUAD 55944440 - 55944420 55944460 41 AGCGGTCATAGGCCATCACTGACAGTAAGAAGCCTTCTGTG AGCGGTCATAGGCCATCACTTACAGTAAGAAGCCTTCTGTG Direct Gain 0 0.949492204099253 0 0.999871850013733 prediction 0.898984408198505 Functional Gain - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944440 chr11:55944440 stopgain 0.000 0 21 hPsi_associated_SNPs_106517 0 0 0 0 0 unknown 0 0.4387132934647 0.999743700027466 0 hPsi_site_5477 iPseU_CNN:0.999743700027466;iRNA_PseU:0 5478 chr5 38406299 38406299 1 + G A SKCM 38406299 - 38406279 38406319 41 TAAGTCGTCTTCAAATCCTTCATCATCCTCACCAGCTCCCA TAAGTCGTCTTCAAATCCTTTATCATCCTCACCAGCTCCCA Direct Gain 0 0.949481437516983 0 0.999665379524231 prediction 0.898962875033965 Functional Gain - EGFLAM ENSG00000164318 CDS Human protein_coding chr5:38406299 chr5:38406299 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_106518 0 0 0 0 0 Cytosol 0 0.438664710321403 0.999330759048462 0 hPsi_site_5478 iPseU_CNN:0.999330759048462;iRNA_PseU:0 5479 chr20 411291 411291 1 + G T rs6107317 411291 + 411271 411311 41 TGCGGCTCCCACCTCTGCCTGACCCCAGCCTTAAACATAGC TGCGGCTCCCACCTCTGCCTTACCCCAGCCTTAAACATAGC Direct Gain 0 0.949478393905548 0 0.995213866233826 prediction 0.898956787811095 Functional Gain - RBCK1 ENSG00000125826 UTR3 Human protein_coding chr20:411291 chr20:411291 . . 0 21 hPsi_associated_SNPs_106519 0 0 1 0 0 Ribosome 0 0.438719065562117 0.990427732467652 0 hPsi_site_5479 iPseU_CNN:0.990427732467652;iRNA_PseU:0 5480 chr13 53030731 53030731 1 + G T UCEC 53030731 + 53030711 53030751 41 GCATACAAGCAGGAAAATGAGATGTTATCCAGGTAAGGTCA GCATACAAGCAGGAAAATGATATGTTATCCAGGTAAGGTCA Direct Gain 0 0.949476012066557 0 0.999879717826843 prediction 0.898952024133114 Functional Gain - CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53030731 chr13:53030731 nonsynonymous SNV 0.042 1 21 hPsi_associated_SNPs_106520 0 0 1 0 2 Cytosol 0 0.435398748772249 0.999759435653686 0 hPsi_site_5480 iPseU_CNN:0.999759435653686;iRNA_PseU:0 5481 chr15 25479402 25479402 1 + G A HNSC 25479402 - 25479382 25479422 41 AGATAATACAAGGTTCTCATCATTGACCCAACCCAGGGCAC AGATAATACAAGGTTCTCATTATTGACCCAACCCAGGGCAC Direct Gain 0 0.949475862466631 0 0.295509397983551 prediction 0.898951724933262 Functional Gain - SNORD115-35 ENSG00000201992 ncRNA_exonic Human snoRNA chr15:25479402 chr15:25479402 . . 0 21 hPsi_associated_SNPs_106521 0 0 0 0 0 unknown 0 0.438719146033206 0 0 hPsi_site_5481 iPseU_CNN:0;iRNA_PseU:0 5482 chr3 185191480 185191480 1 + G A SKCM 185191480 - 185191460 185191500 41 TGAGAGGTGCCGAGGGATGACTCAGACCTACAGCCGCTGAA TGAGAGGTGCCGAGGGATGATTCAGACCTACAGCCGCTGAA Direct Gain 0 0.949475259401352 0 0.997753977775574 prediction 0.898950518802703 Functional Gain - MAP3K13 ENSG00000073803 CDS Human protein_coding chr3:185191480 chr3:185191480 synonymous SNV . 0 21 hPsi_associated_SNPs_106522 0 0 0 0 0 Cytosol 0 0.438648445170304 0.995507955551148 0 hPsi_site_5482 iPseU_CNN:0.995507955551148;iRNA_PseU:0 5483 chr6 36262158 36262158 1 + G T LUAD 36262158 + 36262138 36262178 41 GCCAGGATGACCCACGCATTGTTCCCCCCGGACCTGGTGGT GCCAGGATGACCCACGCATTTTTCCCCCCGGACCTGGTGGT Direct Gain 0 0.949469487458916 0 0.831752121448517 prediction 0.898938974917833 Functional Gain - PNPLA1 ENSG00000180316 CDS Human protein_coding chr6:36262158 chr6:36262158 nonsynonymous SNV 0.587 1 21 hPsi_associated_SNPs_106523 0 0 0 0 1 exosome 0 0.438718593096772 0.663504242897034 0 hPsi_site_5483 iPseU_CNN:0.663504242897034;iRNA_PseU:0 5484 chr8 96037287 96037287 1 + C A rs113557846 96037287 - 96037267 96037307 41 CGGCGGCAGCACAGGCCGGGGATGCCAAGCCGCAACGGCCC CGGCGGCAGCACAGGCCGGGTATGCCAAGCCGCAACGGCCC Direct Gain 0 0.94946944921914 0 0.99996542930603 prediction 0.89893889843828 Functional Gain - NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96037287 chr8:96037287 synonymous SNV . 0 21 hPsi_associated_SNPs_106524 1 0 0 0 0 chromatin 0 0.438588881723806 0.99993085861206 0 hPsi_site_5484 iPseU_CNN:0.99993085861206;iRNA_PseU:0 5485 chr14 76949074 76949074 1 + C T SKCM 76949074 + 76949054 76949094 41 GCAGACCGAGAGCTTGTGGTCATCATTGGCTGGGCCAAGCA GCAGACCGAGAGCTTGTGGTTATCATTGGCTGGGCCAAGCA Direct Gain 0 0.949461135756138 0 0.9641392827034 prediction 0.898922271512277 Functional Gain - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76949074 chr14:76949074 synonymous SNV . 0 21 hPsi_associated_SNPs_106525 0 0 0 0 1 Nucleus 0 0.433073962332251 0.9282785654068 0 hPsi_site_5485 iPseU_CNN:0.9282785654068;iRNA_PseU:0 5486 chr11 123901097 123901097 1 + C T SKCM 123901097 + 123901077 123901117 41 TTCTTTGGCCCTGGTCTTTTCATTTACCTGAGGCCAGGCTC TTCTTTGGCCCTGGTCTTTTTATTTACCTGAGGCCAGGCTC Direct Gain 0 0.949460706328037 0 0.995470881462097 prediction 0.898921412656073 Functional Gain - OR10G8 ENSG00000234560 CDS Human protein_coding chr11:123901097 chr11:123901097 synonymous SNV . 0 21 hPsi_associated_SNPs_106526 0 0 0 0 0 unknown 0 0.438718912371952 0.990941762924194 0 hPsi_site_5486 iPseU_CNN:0.990941762924194;iRNA_PseU:0 5487 chr13 25268600 25268600 1 + G A LUAD 25268600 - 25268580 25268620 41 TAAAAGAGCAGTTTCTGAGGCATCTCCAATCACAGCTTTCT TAAAAGAGCAGTTTCTGAGGTATCTCCAATCACAGCTTTCT Direct Gain 0 0.94946049536881 0 0.0042966902256012 prediction 0.898920990737619 Functional Gain - ATP12A ENSG00000075673 CDS Human protein_coding chr13:25268600 chr13:25268600 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106527 0 0 0 0 0 Nucleus 0 0.438718566238001 0 0 hPsi_site_5487 iPseU_CNN:0;iRNA_PseU:0 5488 chr7 80301321 80301321 1 + G A SKCM 80301321 - 80301301 80301341 41 GTATGTCCTATGTTCTTCTTCATTTGGGTTTAATCCATCAA GTATGTCCTATGTTCTTCTTTATTTGGGTTTAATCCATCAA Direct Gain 0 0.949454172948499 0 0.996125817298889 prediction 0.898908345896997 Functional Gain - CD36 ENSG00000135218 CDS Human protein_coding chr7:80301321 chr7:80301321 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_106528 0 0 0 0 0 Nucleus 0 0.438828954129821 0.992251634597778 0 hPsi_site_5488 iPseU_CNN:0.992251634597778;iRNA_PseU:0 5489 chr11 6221264 6221264 1 + C T DLBC 6221264 + 6221244 6221284 41 ACCTCACACACCGCTTTGGTCATCACACTGTCCCAAAGCCT ACCTCACACACCGCTTTGGTTATCACACTGTCCCAAAGCCT Direct Gain 0 0.949452240625641 0 0.624934613704681 prediction 0.898904481251281 Functional Gain - OR52W1 ENSG00000175485 CDS Human protein_coding chr11:6221264 chr11:6221264 nonsynonymous SNV 0.325 0 21 hPsi_associated_SNPs_106529 0 0 0 0 0 unknown 0 0.438733812797256 0.249869227409362 0 hPsi_site_5489 iPseU_CNN:0.249869227409362;iRNA_PseU:0 5490 chr6 33403080 33403080 1 + G A LUSC 33403080 - 33403060 33403100 41 GCCCACCAGACCCAGTACCTCAAAACAGAACTCCTGGCCCA GCCCACCAGACCCAGTACCTTAAAACAGAACTCCTGGCCCA Direct Gain 0 0.949448527683623 0 0.356095552444458 prediction 0.898897055367247 Functional Gain - SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33403080 chr6:33403080 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_106530 0 0 0 0 0 chromatin 0 0.438814587314628 0 0 hPsi_site_5490 iPseU_CNN:0;iRNA_PseU:0 5491 chr2 131116870 131116870 1 + C T LGG 131116870 + 131116850 131116890 41 CACAGCGACTACATTAATGGCAACTTCATCCGGGTGAGGGT CACAGCGACTACATTAATGGTAACTTCATCCGGGTGAGGGT Direct Gain 0 0.94944765754219 0 0.999702572822571 prediction 0.898895315084379 Functional Gain - PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131116870 chr2:131116870 synonymous SNV . 0 21 hPsi_associated_SNPs_106531 0 0 0 0 2 Cytosol 0 0.438718527805304 0.999405145645142 0 hPsi_site_5491 iPseU_CNN:0.999405145645142;iRNA_PseU:0 5492 chr2 114335700 114335700 1 + C T CESC 114335700 + 114335680 114335720 41 GGGCAAGTTCTTAAACCCTTCAAAGCCTCATTTTTCTCCAA GGGCAAGTTCTTAAACCCTTTAAAGCCTCATTTTTCTCCAA Direct Gain 0 0.949446370015829 0 0.818947494029999 prediction 0.898892740031658 Functional Gain - FAM138B ENSG00000226516 ncRNA_exonic Human lincRNA chr2:114335700 chr2:114335700 . . 0 21 hPsi_associated_SNPs_106532 0 0 0 0 1 unknown 0 0.438718592995102 0.637894988059998 0 hPsi_site_5492 iPseU_CNN:0.637894988059998;iRNA_PseU:0 5493 chr19 15221329 15221329 1 + C T LUSC 15221329 + 15221309 15221349 41 CTCAGGCCCCCTTGTGTCCTCAGGGTGCCAGGCCCAACAGC CTCAGGCCCCCTTGTGTCCTTAGGGTGCCAGGCCCAACAGC Direct Gain 0 0.949445414968227 0 0.998292863368988 prediction 0.898890829936454 Functional Gain - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15221329 chr19:15221329 nonsynonymous SNV 0.346 0 21 hPsi_associated_SNPs_106533 0 0 1 0 0 exosome 0 0.438718592995087 0.996585726737976 0 hPsi_site_5493 iPseU_CNN:0.996585726737976;iRNA_PseU:0 5494 chr10 38344004 38344004 1 + C T COAD 38344004 + 38343984 38344024 41 GGAGGAAATTGTGTCTGTCACACCTTCAGAAAGGTGATAAA GGAGGAAATTGTGTCTGTCATACCTTCAGAAAGGTGATAAA Direct Gain 0 0.949433211377308 0 0.0404723584651947 prediction 0.898866422754616 Functional Gain - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38344004 chr10:38344004 nonsynonymous SNV 0.433 0 21 hPsi_associated_SNPs_106534 0 0 1 0 0 Cytosol 0 0.364361133501297 0 0 hPsi_site_5494 iPseU_CNN:0;iRNA_PseU:0 5495 chr16 30998277 30998277 1 + C T LUSC 30998277 + 30998257 30998297 41 CTGCGCCTGGGAGGTTGGCTCTTCCGGGCCATCCCGGCCTC CTGCGCCTGGGAGGTTGGCTTTTCCGGGCCATCCCGGCCTC Direct Gain 0 0.949432571306611 0 0.950557708740234 prediction 0.898865142613222 Functional Gain - HSD3B7 ENSG00000099377 CDS Human protein_coding chr16:30998277 chr16:30998277 synonymous SNV . 0 21 hPsi_associated_SNPs_106535 0 0 0 0 1 Ribosome 0 0.43871836605583 0.901115417480468 0 hPsi_site_5495 iPseU_CNN:0.901115417480468;iRNA_PseU:0 5496 chr7 123256477 123256477 1 + G A SKCM 123256477 - 123256457 123256497 41 CAATGGAAACCATCCTTTTTCATCAGCTTCATCCATTGCAT CAATGGAAACCATCCTTTTTTATCAGCTTCATCCATTGCAT Direct Gain 0 0.949424688775924 0 0.950198888778687 prediction 0.898849377551848 Functional Gain - ASB15 ENSG00000146809 CDS Human protein_coding chr7:123256477 chr7:123256477 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_106536 0 0 1 0 0 exosome 0 0.438717321904089 0.900397777557374 0 hPsi_site_5496 iPseU_CNN:0.900397777557374;iRNA_PseU:0 5497 chr3 10970929 10970929 1 + G A UCEC 10970929 - 10970909 10970949 41 CTCCGGAAAACCTTGGGGTACATGTCCACCACGGCGGTCAC CTCCGGAAAACCTTGGGGTATATGTCCACCACGGCGGTCAC Direct Gain 0 0.949424414017681 0 0.999924838542938 prediction 0.898848828035361 Functional Gain - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10970929 chr3:10970929 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106537 0 0 0 0 0 cytosol 0 0.438718592995102 0.999849677085876 0 hPsi_site_5497 iPseU_CNN:0.999849677085876;iRNA_PseU:0 5498 chr12 81536961 81536961 1 + G T LUSC 81536961 + 81536941 81536981 41 AAGCCCAGTCACATGACTGTGTTCCTGTTCTTTCAGAACAC AAGCCCAGTCACATGACTGTTTTCCTGTTCTTTCAGAACAC Direct Gain 0 0.949421066305923 0 0.405258655548096 prediction 0.898842132611845 Functional Gain - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81536961 chr12:81536961 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106538 0 0 1 0 2 cytosol 0 0.439115068124708 0 0 hPsi_site_5498 iPseU_CNN:0;iRNA_PseU:0 5499 chr17 56233261 56233261 1 + G T COAD 56233261 + 56233241 56233281 41 CACATCATCGTGGTGTCCATGATCTTCATTCCCTGTATCTA CACATCATCGTGGTGTCCATTATCTTCATTCCCTGTATCTA Direct Gain 0 0.949417746149743 0 0.999554514884949 prediction 0.898835492299486 Functional Gain - OR4D1 ENSG00000141194 CDS Human protein_coding chr17:56233261 chr17:56233261 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_106539 0 0 0 0 0 unknown 0 0.438963615699304 0.999109029769898 0 hPsi_site_5499 iPseU_CNN:0.999109029769898;iRNA_PseU:0 5500 chr19 2338837 2338837 1 + C T SKCM 2338837 + 2338817 2338857 41 AAAGACATGCTGGACATCTTCACGGTAGGTCTGCGCCGGCT AAAGACATGCTGGACATCTTTACGGTAGGTCTGCGCCGGCT Direct Gain 0 0.949417246443051 0 0.998238801956177 prediction 0.898834492886102 Functional Gain - SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2338837 chr19:2338837 . . 0 21 hPsi_associated_SNPs_106540 0 0 1 0 1 Endoplasmic reticulum 0 0.43871951038404 0.996477603912354 0 hPsi_site_5500 iPseU_CNN:0.996477603912354;iRNA_PseU:0 5501 chr9 35677808 35677808 1 + G A UCEC 35677808 - 35677788 35677828 41 AGACAGCAACTGCTCATAGGCACTGTTTTCTTCCGGGCCCT AGACAGCAACTGCTCATAGGTACTGTTTTCTTCCGGGCCCT Direct Gain 0 0.949407783651634 0 0.99999725818634 prediction 0.898815567303267 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35677808 chr9:35677808 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_106541 0 0 0 0 0 Endoplasmic reticulum 0 0.438718540344521 0.99999451637268 0 hPsi_site_5501 iPseU_CNN:0.99999451637268;iRNA_PseU:0 5502 chr19 6772993 6772993 1 + G T UCEC 6772993 + 6772973 6773013 41 CCCATGCCATCAACCTGCGTGAGGTCAACCTGCGCCCCCAG CCCATGCCATCAACCTGCGTTAGGTCAACCTGCGCCCCCAG Direct Gain 0 0.949406387299971 0 0.999954640865326 prediction 0.898812774599941 Functional Gain - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6772993 chr19:6772993 stopgain 0.932 0 21 hPsi_associated_SNPs_106542 0 0 1 0 1 Endoplasmic reticulum 0 0.437741842155444 0.999909281730652 0 hPsi_site_5502 iPseU_CNN:0.999909281730652;iRNA_PseU:0 5503 chr12 132394476 132394476 1 + G T COAD 132394476 + 132394456 132394496 41 TGCCCCAGCATCCCCCGGGAGACCTCGGCCCCGCTGCGGCA TGCCCCAGCATCCCCCGGGATACCTCGGCCCCGCTGCGGCA Direct Gain 0 0.949401267404958 0 0.995949447154999 prediction 0.898802534809917 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132394476 chr12:132394476 nonsynonymous SNV 0.914 1 21 hPsi_associated_SNPs_106543 0 0 1 0 2 Cytosol 0 0.438718584354852 0.991898894309998 0 hPsi_site_5503 iPseU_CNN:0.991898894309998;iRNA_PseU:0 5504 chrX 153694567 153694567 1 + G T LUAD 153694567 + 153694547 153694587 41 GGAGCTGTGTGTGGGTGACTGTTCAGCCGACTTCCGCACGC GGAGCTGTGTGTGGGTGACTTTTCAGCCGACTTCCGCACGC Direct Gain 0 0.949397243779886 0 0.999340295791626 prediction 0.898794487559772 Functional Gain - PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153694567 chrX:153694567 nonsynonymous SNV 0.569 3 21 hPsi_associated_SNPs_106544 0 0 1 0 2 Endoplasmic reticulum 0 0.438718508852655 0.998680591583252 0 hPsi_site_5504 iPseU_CNN:0.998680591583252;iRNA_PseU:0 5505 chr13 32900690 32900690 1 + G A UCEC 32900690 - 32900670 32900710 41 AGAACTTGACCAAGACATATCAGGATCCACCTCAGCTCCTA AGAACTTGACCAAGACATATTAGGATCCACCTCAGCTCCTA Direct Gain 0 0.949397014558883 0 0.994202136993408 prediction 0.898794029117766 Functional Gain - BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32900690 chr13:32900690 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_106545 0 0 0 0 0 Nucleus 0 0.438718587022223 0.988404273986816 0 hPsi_site_5505 iPseU_CNN:0.988404273986816;iRNA_PseU:0 5506 chr3 178938894 178938894 1 + C T LUSC 178938894 + 178938874 178938914 41 GTCGAGGCAATGGAAAAGCTCATTAACTTAACTGACATTCT GTCGAGGCAATGGAAAAGCTTATTAACTTAACTGACATTCT Direct Gain 0 0.949394076847035 0 0.994269788265228 prediction 0.89878815369407 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178938894 chr3:178938894 synonymous SNV . 0 21 hPsi_associated_SNPs_106546 0 0 1 0 1 Ribosome 0 0.438743516743824 0.988539576530456 0 hPsi_site_5506 iPseU_CNN:0.988539576530456;iRNA_PseU:0 5507 chr17 40933193 40933193 1 + C T COAD 40933193 + 40933173 40933213 41 GAGCAGGAAGAAAAGGAGGACATGGAGACCCAGGCTGTGGC GAGCAGGAAGAAAAGGAGGATATGGAGACCCAGGCTGTGGC Direct Gain 0 0.949386863167692 0 0.380657494068146 prediction 0.898773726335385 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40933193 chr17:40933193 synonymous SNV . 0 21 hPsi_associated_SNPs_106547 0 0 1 0 0 chromatin 0 0.438718592944084 0 0 hPsi_site_5507 iPseU_CNN:0;iRNA_PseU:0 5508 chr10 1136248 1136248 1 + G A rs138438768 1136248 - 1136228 1136268 41 AACTTAGCTGGGCGTGGTGGCATGTGCCTGTACTCCCAGCT AACTTAGCTGGGCGTGGTGGTATGTGCCTGTACTCCCAGCT Direct Gain 0 0.949385896527815 0 0.999977588653564 prediction 0.898771793055631 Functional Gain - WDR37 ENSG00000047056 intronic Human protein_coding chr10:1136248 chr10:1136248 . . 0 21 hPsi_associated_SNPs_106548 0 0 0 0 0 Cytosol 0 0.439028609496013 0.999955177307128 0 hPsi_site_5508 iPseU_CNN:0.999955177307128;iRNA_PseU:0 5509 chrY 14952494 14952494 1 + G T BLCA 14952494 + 14952474 14952514 41 TTAGAGTATTTTCAGTTTGTGAAAAAACTGCTTACATGTAA TTAGAGTATTTTCAGTTTGTTAAAAAACTGCTTACATGTAA Direct Gain 0 0.949383304034989 0 0.99975860118866 prediction 0.898766608069979 Functional Gain - USP9Y ENSG00000114374 CDS Human protein_coding chrY:14952494 chrY:14952494 synonymous SNV . 0 21 hPsi_associated_SNPs_106549 0 0 0 0 1 Cytosol 0 0.438502159259991 0.99951720237732 0 hPsi_site_5509 iPseU_CNN:0.99951720237732;iRNA_PseU:0 5510 chr3 178952100 178952100 1 + C A COAD 178952100 - 178952080 178952120 41 AGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCA AGATCCAATCCATTTTTGTTTTCCAGCCACCATGATGTGCA Direct Gain 0 0.949380896023189 0 0.016672670841217 prediction 0.898761792046378 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178952100 chr3:178952100 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_106550 0 0 0 0 0 Ribosome 0 0.438718684142705 0 0 hPsi_site_5510 iPseU_CNN:0;iRNA_PseU:0 5511 chr20 23350941 23350941 1 + G A rs6048766 23350941 - 23350921 23350961 41 ATCTGCCTTGCAGGCTGTGTCAGCAGAACTGTTCTCCTGCA ATCTGCCTTGCAGGCTGTGTTAGCAGAACTGTTCTCCTGCA Direct Gain 0 0.949377225924604 0 0.315933644771576 prediction 0.898754451849209 Functional Gain - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23350941 chr20:23350941 nonsynonymous SNV 0.018 0 21 hPsi_associated_SNPs_106551 0 0 1 0 0 Cytosol 0 0.439458606584762 0 0 hPsi_site_5511 iPseU_CNN:0;iRNA_PseU:0 5512 chr8 121262899 121262899 1 + C A LUAD 121262899 - 121262879 121262919 41 AGGTTTGTGATAAGGATGGTGTTAATGTCAGCTCCCACAAA AGGTTTGTGATAAGGATGGTTTTAATGTCAGCTCCCACAAA Direct Gain 0 0.949375048468541 0 0.982754766941071 prediction 0.898750096937083 Functional Gain - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121262899 chr8:121262899 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_106552 0 0 0 0 0 Ribosome 0 0.438701916394812 0.965509533882142 0 hPsi_site_5512 iPseU_CNN:0.965509533882142;iRNA_PseU:0 5513 chr18 33751067 33751067 1 + G A SKCM 33751067 - 33751047 33751087 41 ATTTCTGGAACTTGATCAGTCTTTTTCCAGGTATATAAGCA ATTTCTGGAACTTGATCAGTTTTTTTCCAGGTATATAAGCA Direct Gain 0 0.949372688717074 0 0.999944627285004 prediction 0.898745377434147 Functional Gain - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33751067 chr18:33751067 synonymous SNV . 0 21 hPsi_associated_SNPs_106553 0 0 0 0 0 Nucleus 0 0.438762794858207 0.999889254570008 0 hPsi_site_5513 iPseU_CNN:0.999889254570008;iRNA_PseU:0 5514 chr19 51728629 51728629 1 + G A rs115684563 51728629 - 51728609 51728649 41 AGAGTCCCTGGATATAATGGCTCCTTCCCGGAACCAGTAAC AGAGTCCCTGGATATAATGGTTCCTTCCCGGAACCAGTAAC Direct Gain 0 0.949369163129165 0 0.941811919212341 prediction 0.898738326258329 Functional Gain - CD33 ENSG00000105383 CDS Human protein_coding chr19:51728629 chr19:51728629 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106554 0 0 0 0 0 exosome 0 0.438718603834371 0.883623838424682 0 hPsi_site_5514 iPseU_CNN:0.883623838424682;iRNA_PseU:0 5515 chr7 28857705 28857705 1 + G A SKCM 28857705 - 28857685 28857725 41 AGCTGGGCCACCTCATTTTTCAACATAGACACTTCATTCTA AGCTGGGCCACCTCATTTTTTAACATAGACACTTCATTCTA Direct Gain 0 0.949365698301891 0 0.997205972671509 prediction 0.898731396603782 Functional Gain - CREB5 ENSG00000146592 CDS Human protein_coding chr7:28857705 chr7:28857705 synonymous SNV . 0 21 hPsi_associated_SNPs_106555 0 0 0 0 0 Cytosol 0 0.438731405777555 0.994411945343018 0 hPsi_site_5515 iPseU_CNN:0.994411945343018;iRNA_PseU:0 5516 chr5 1219624 1219624 1 + C T HNSC 1219624 + 1219604 1219644 41 GTCCCCCGGCCTGCAGGCCTCATCTGCCTGGGGACATTCCT GTCCCCCGGCCTGCAGGCCTTATCTGCCTGGGGACATTCCT Direct Gain 0 0.949361231376355 0 0.998908281326294 prediction 0.898722462752711 Functional Gain - SLC6A19 ENSG00000174358 CDS Human protein_coding chr5:1219624 chr5:1219624 synonymous SNV . 0 21 hPsi_associated_SNPs_106556 0 0 0 0 1 cytosol 0 0.438718592995111 0.997816562652588 0 hPsi_site_5516 iPseU_CNN:0.997816562652588;iRNA_PseU:0 5517 chr19 52869463 52869463 1 + C T rs140259910 52869463 + 52869443 52869483 41 GCAATTCAAACCTTGCACGACATCAAAGAATTCATACTGGA GCAATTCAAACCTTGCACGATATCAAAGAATTCATACTGGA Direct Gain 0 0.949359185085234 0 0.992378115653992 prediction 0.898718370170467 Functional Gain - ZNF610 ENSG00000167554 CDS Human protein_coding chr19:52869463 chr19:52869463 nonsynonymous SNV 0.013 4 21 hPsi_associated_SNPs_106557 0 0 0 0 0 exosome 0 0.440142560876034 0.984756231307984 0 hPsi_site_5517 iPseU_CNN:0.984756231307984;iRNA_PseU:0 5518 chr1 245772617 245772617 1 + C T UCEC 245772617 + 245772597 245772637 41 GATTCCATGCAGAACCTGGGCATCATTCCCTGTGCCATCTC GATTCCATGCAGAACCTGGGTATCATTCCCTGTGCCATCTC Direct Gain 0 0.949349343388315 0 0.99981278181076 prediction 0.898698686776631 Functional Gain - KIF26B ENSG00000162849 CDS Human protein_coding chr1:245772617 chr1:245772617 synonymous SNV . 0 21 hPsi_associated_SNPs_106558 0 0 0 0 1 insoluble cytoplasm 0 0.438678658970785 0.99962556362152 0 hPsi_site_5518 iPseU_CNN:0.99962556362152;iRNA_PseU:0 5519 chr11 85610008 85610008 1 + G T LIHC 85610008 + 85609988 85610028 41 AGAATGCTGTAAAGCTCATTGACAAGGGCAGTTATCTAGAG AGAATGCTGTAAAGCTCATTTACAAGGGCAGTTATCTAGAG Direct Gain 0 0.949341119204203 0 0.131175339221954 prediction 0.898682238408407 Functional Gain - CCDC83 ENSG00000150676 CDS Human protein_coding chr11:85610008 chr11:85610008 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106559 0 0 0 0 2 exosome 0 0.438720236363479 0 0 hPsi_site_5519 iPseU_CNN:0;iRNA_PseU:0 5520 chr4 134072934 134072934 1 + G T LUSC 134072934 + 134072914 134072954 41 GTTTTCAGGTGGAAGCCCGGGACGCTGGCAGCCCCCAGGCG GTTTTCAGGTGGAAGCCCGGTACGCTGGCAGCCCCCAGGCG Direct Gain 0 0.94933738558096 0 1 prediction 0.898674771161919 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134072934 chr4:134072934 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_106560 0 0 0 0 0 cytosol 0 0.438718595704303 1 0 hPsi_site_5520 iPseU_CNN:1;iRNA_PseU:0 5521 chr1 86905881 86905881 1 + G T UCEC 86905881 + 86905861 86905901 41 GGCTCTGTGATGATATTAGTGACCAGCGGAGATGATAAGCT GGCTCTGTGATGATATTAGTTACCAGCGGAGATGATAAGCT Direct Gain 0 0.94933661585802 0 0.245640844106674 prediction 0.898673231716039 Functional Gain - CLCA2 ENSG00000137975 CDS Human protein_coding chr1:86905881 chr1:86905881 synonymous SNV . 0 21 hPsi_associated_SNPs_106561 0 0 0 0 1 exosome 0 0.438718684813162 0 0 hPsi_site_5521 iPseU_CNN:0;iRNA_PseU:0 5522 chr19 1046262 1046262 1 + G T rs200677638 1046262 + 1046242 1046282 41 GGCCCAGCCGCGGACCCCCTGACCGACCTGCGCTACGTGTG GGCCCAGCCGCGGACCCCCTTACCGACCTGCGCTACGTGTG Direct Gain 0 0.94933562711203 0 0.999181032180786 prediction 0.898671254224059 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1046262 chr19:1046262 synonymous SNV . 0 21 hPsi_associated_SNPs_106562 0 0 1 0 1 Endoplasmic reticulum 0 0.438717299677898 0.998362064361572 0 hPsi_site_5522 iPseU_CNN:0.998362064361572;iRNA_PseU:0 5523 chr6 133427266 133427266 1 + G A CESC 133427266 - 133427246 133427286 41 GCTCCCAACTGTCTTCTGATCATCTTTAAATTCCCATTTCC GCTCCCAACTGTCTTCTGATTATCTTTAAATTCCCATTTCC Direct Gain 0 0.949331563655756 0 0.891763627529144 prediction 0.898663127311511 Functional Gain - LINC00326 ENSG00000231023 ncRNA_exonic Human lincRNA chr6:133427266 chr6:133427266 . . 0 21 hPsi_associated_SNPs_106563 0 0 0 0 0 unknown 0 0.438713375923304 0.783527255058288 0 hPsi_site_5523 iPseU_CNN:0.783527255058288;iRNA_PseU:0 5524 chr3 141497148 141497148 1 + G T LUAD 141497148 + 141497128 141497168 41 TGGTGGACATGGGGGCCCTGGACAACCTGATCGCCAACACC TGGTGGACATGGGGGCCCTGTACAACCTGATCGCCAACACC Direct Gain 0 0.949313621475485 0 0.999979734420776 prediction 0.898627242950969 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141497148 chr3:141497148 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106564 0 0 0 0 0 exosome 0 0.438718592909543 0.999959468841552 0 hPsi_site_5524 iPseU_CNN:0.999959468841552;iRNA_PseU:0 5525 chr16 705409 705409 1 + C T rs569657851 705409 + 705389 705429 41 GAGCACCACGCGCTGCAGTTCACCGACCTGGCCTTCAAGCA GAGCACCACGCGCTGCAGTTTACCGACCTGGCCTTCAAGCA Direct Gain 0 0.94931301783214 0 0.998597621917725 prediction 0.898626035664279 Functional Gain - WDR90 ENSG00000161996 CDS Human protein_coding chr16:705409 chr16:705409 synonymous SNV . 0 21 hPsi_associated_SNPs_106565 0 0 1 0 1 Cytosol 0 0.438024908852128 0.99719524383545 0 hPsi_site_5525 iPseU_CNN:0.99719524383545;iRNA_PseU:0 5526 chr6 31964370 31964370 1 + G A SKCM 31964370 - 31964350 31964390 41 CCTCACCCCTCACCTCCAGTCTCCTGGGCCATTGCCATGAG CCTCACCCCTCACCTCCAGTTTCCTGGGCCATTGCCATGAG Direct Gain 0 0.949304526705452 0 0.995370507240295 prediction 0.898609053410903 Functional Gain - C4A;C4B;C4B_2 ENSG00000244731 CDS Human protein_coding chr6:31964370 chr6:31964370 synonymous SNV . 0 21 hPsi_associated_SNPs_106566 0 0 0 0 0 unknown 0 0.438717124155176 0.99074101448059 0 hPsi_site_5526 iPseU_CNN:0.99074101448059;iRNA_PseU:0 5527 chr16 27080215 27080215 1 + C A UCEC 27080215 - 27080195 27080235 41 GGGTTGGGCTCTGTCACCATGAAGTGCTTCTCACGGCATTG GGGTTGGGCTCTGTCACCATTAAGTGCTTCTCACGGCATTG Direct Gain 0 0.949303111503365 0 0.915291786193848 prediction 0.898606223006729 Functional Gain - C16orf82 ENSG00000234186 ncRNA_exonic Human protein_coding chr16:27080215 chr16:27080215 . . 0 21 hPsi_associated_SNPs_106567 0 0 0 0 0 unknown 0 0.438656825817523 0.830583572387696 0 hPsi_site_5527 iPseU_CNN:0.830583572387696;iRNA_PseU:0 5528 chr12 27908279 27908279 1 + G A LIHC 27908279 - 27908259 27908299 41 AACAGACTTTTTGTACTCTTCAATTTCTTTAGTACCAAGGA AACAGACTTTTTGTACTCTTTAATTTCTTTAGTACCAAGGA Direct Gain 0 0.949298174695016 0 0.999643743038177 prediction 0.898596349390032 Functional Gain - MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908279 chr12:27908279 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_106568 0 0 0 0 0 Ribosome 0 0.440227466466708 0.999287486076354 0 hPsi_site_5528 iPseU_CNN:0.999287486076354;iRNA_PseU:0 5529 chr10 35894525 35894525 1 + C T BLCA 35894525 + 35894505 35894545 41 GTGGACTTGCTAGGGTTTCTCATCATCACATTAAACTGCAA GTGGACTTGCTAGGGTTTCTTATCATCACATTAAACTGCAA Direct Gain 0 0.949296529114255 0 0.0743857324123383 prediction 0.898593058228509 Functional Gain - GJD4 ENSG00000177291 CDS Human protein_coding chr10:35894525 chr10:35894525 synonymous SNV . 0 21 hPsi_associated_SNPs_106569 0 0 0 0 1 exosome 0 0.438713494769825 0 0 hPsi_site_5529 iPseU_CNN:0;iRNA_PseU:0 5530 chrX 37027790 37027790 1 + C T SKCM 37027790 + 37027770 37027810 41 GCCTCCCAAGACTCGCGGATCTCATCTCCGCCCGGAACCTC GCCTCCCAAGACTCGCGGATTTCATCTCCGCCCGGAACCTC Direct Gain 0 0.949296002263967 0 0.998967409133911 prediction 0.898592004527934 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37027790 chrX:37027790 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106570 0 0 0 0 0 unknown 0 0.438708614069423 0.997934818267822 0 hPsi_site_5530 iPseU_CNN:0.997934818267822;iRNA_PseU:0 5531 chr6 72596810 72596810 1 + G A UCEC 72596810 - 72596790 72596830 41 ATGTTCCTCTCCTCTTCGGTCAGGTGGCTCAGGTCGGGCAG ATGTTCCTCTCCTCTTCGGTTAGGTGGCTCAGGTCGGGCAG Direct Gain 0 0.949285726644436 0 0.847079157829285 prediction 0.898571453288872 Functional Gain - RIMS1 ENSG00000079841 CDS Human protein_coding chr6:72596810 chr6:72596810 synonymous SNV . 0 21 hPsi_associated_SNPs_106571 0 0 0 0 0 Endoplasmic reticulum 0 0.43871291329644 0.69415831565857 0 hPsi_site_5531 iPseU_CNN:0.69415831565857;iRNA_PseU:0 5532 chr2 113940973 113940973 1 + G A COAD 113940973 - 113940953 113940993 41 GAATGGAGGGGTACAATGCCCACTGATAGCAGCGCCGTCCC GAATGGAGGGGTACAATGCCTACTGATAGCAGCGCCGTCCC Direct Gain 0 0.949285290005364 0 0.968379855155945 prediction 0.898570580010729 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940973 chr2:113940973 nonsynonymous SNV 0.035 1 21 hPsi_associated_SNPs_106572 0 0 0 0 0 chromatin 0 0.438570236630626 0.93675971031189 0 hPsi_site_5532 iPseU_CNN:0.93675971031189;iRNA_PseU:0 5533 chr1 222838912 222838912 1 + C T UCEC 222838912 + 222838892 222838932 41 AGATGAGCCTCCACCTGCCTCTCAGAGCACTAGCCAGGACT AGATGAGCCTCCACCTGCCTTTCAGAGCACTAGCCAGGACT Direct Gain 0 0.949284646857302 0 0.0582636296749115 prediction 0.898569293714604 Functional Gain - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222838912 chr1:222838912 nonsynonymous SNV 0.630 3 21 hPsi_associated_SNPs_106573 0 0 1 0 0 Endoplasmic reticulum 0 0.439917669005678 0 0 hPsi_site_5533 iPseU_CNN:0;iRNA_PseU:0 5534 chr19 13991279 13991279 1 + G A LUSC 13991279 - 13991259 13991299 41 AGAGCAGGAGGGCGAAGGCTCAGACTTCCCGGCACCTCTGA AGAGCAGGAGGGCGAAGGCTTAGACTTCCCGGCACCTCTGA Direct Gain 0 0.949283185158282 0 0.999502778053284 prediction 0.898566370316564 Functional Gain - NANOS3 ENSG00000187556 CDS Human protein_coding chr19:13991279 chr19:13991279 nonsynonymous SNV 0.026 0 21 hPsi_associated_SNPs_106574 0 0 0 0 0 exosome 0 0.438718592994753 0.999005556106568 0 hPsi_site_5534 iPseU_CNN:0.999005556106568;iRNA_PseU:0 5535 chr7 21744171 21744171 1 + G A HNSC 21744171 - 21744151 21744191 41 ACCATCTGTTCAAAGTGCAGCTTCCTCCTCCGGGGCACATC ACCATCTGTTCAAAGTGCAGTTTCCTCCTCCGGGGCACATC Direct Gain 0 0.949278882073023 0 0.929213285446167 prediction 0.898557764146047 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21744171 chr7:21744171 synonymous SNV . 0 21 hPsi_associated_SNPs_106575 0 0 0 0 0 nucleolus 0 0.438718591218926 0.858426570892334 0 hPsi_site_5535 iPseU_CNN:0.858426570892334;iRNA_PseU:0 5536 chr2 113334645 113334645 1 + G A rs527732074 113334645 - 113334625 113334665 41 TATAATGGCCAAAGATAAGTCACCAGAATATTTGCAGAAAA TATAATGGCCAAAGATAAGTTACCAGAATATTTGCAGAAAA Direct Gain 0 0.949278848913828 0 0.905499517917633 prediction 0.898557697827656 Functional Gain - POLR1B ENSG00000125630 downstream Human protein_coding chr2:113334645 chr2:113334645 . . 0 21 hPsi_associated_SNPs_106576 0 0 0 0 0 Nucleus 0 0.438710339900439 0.810999035835266 0 hPsi_site_5536 iPseU_CNN:0.810999035835266;iRNA_PseU:0 5537 chr10 123846870 123846870 1 + G A OV 123846870 - 123846850 123846890 41 TCCTGGAACCCCTGTGTGAGCAAAGTCCCCGGGACCATCTT TCCTGGAACCCCTGTGTGAGTAAAGTCCCCGGGACCATCTT Direct Gain 0 0.94927522768324 0 0.999807834625244 prediction 0.89855045536648 Functional Gain - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123846870 chr10:123846870 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_106577 0 0 0 0 0 Cytoplasm 0 0.438718638721701 0.999615669250488 0 hPsi_site_5537 iPseU_CNN:0.999615669250488;iRNA_PseU:0 5538 chr19 21570208 21570208 1 + C T rs554514350 21570208 + 21570188 21570228 41 ACCATCTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGT ACCATCTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAGGT Direct Gain 0 0.949273889509715 0 0.960547804832458 prediction 0.898547779019431 Functional Gain - ZNF738 ENSG00000213976 downstream Human unprocessed_pseudogene chr19:21570208 chr19:21570208 . . 0 21 hPsi_associated_SNPs_106578 0 0 0 0 0 exosome 0 0.438672420220698 0.921095609664916 0 hPsi_site_5538 iPseU_CNN:0.921095609664916;iRNA_PseU:0 5539 chr6 44219858 44219858 1 + G A BLCA 44219858 - 44219838 44219878 41 TGAGACCAGGCTCTTCCCATCAAATTCCTTGAGCTGCTGCA TGAGACCAGGCTCTTCCCATTAAATTCCTTGAGCTGCTGCA Direct Gain 0 0.949271732182601 0 0.999862551689148 prediction 0.898543464365201 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219858 chr6:44219858 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106579 0 0 0 0 0 Nucleus 0 0.438692049936614 0.999725103378296 0 hPsi_site_5539 iPseU_CNN:0.999725103378296;iRNA_PseU:0 5540 chrX 29972768 29972768 1 + A T LUSC 29972768 + 29972748 29972788 41 GCTTGAAAAGCATTATGGATATAAGTTGTTTATACCAGATA GCTTGAAAAGCATTATGGATTTAAGTTGTTTATACCAGATA Direct Gain 0 0.949271578247776 0 0.790337920188904 prediction 0.898543156495552 Functional Gain - IL1RAPL1 ENSG00000169306 CDS Human protein_coding chrX:29972768 chrX:29972768 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106580 0 0 0 0 1 exosome 0 0.43901049878961 0.580675840377808 0 hPsi_site_5540 iPseU_CNN:0.580675840377808;iRNA_PseU:0 5541 chr11 5841641 5841641 1 + C A LUAD 5841641 - 5841621 5841661 41 TGGCAGGGAGATCCAGATGTGTGTGGCTTCCAGCCCAGGAA TGGCAGGGAGATCCAGATGTTTGTGGCTTCCAGCCCAGGAA Direct Gain 0 0.949268833226566 0 0.416279882192612 prediction 0.898537666453132 Functional Gain - OR52N2 ENSG00000180988 CDS Human protein_coding chr11:5841641 chr11:5841641 nonsynonymous SNV 0.237 1 21 hPsi_associated_SNPs_106581 0 0 0 0 0 unknown 0 0.43871859298687 0 0 hPsi_site_5541 iPseU_CNN:0;iRNA_PseU:0 5542 chrX 2733276 2733276 1 + G A rs5939339 2733276 - 2733256 2733296 41 GGATGCCTAAGGATTTAAGACTTCCTACCCTGATGAATAGA GGATGCCTAAGGATTTAAGATTTCCTACCCTGATGAATAGA Direct Gain 0 0.949254390131435 0 0.847533226013184 prediction 0.898508780262869 Functional Gain - XG ENSG00000124343 UTR3 Human protein_coding chrX:2733276 chrX:2733276 . . 0 21 hPsi_associated_SNPs_106582 0 0 0 0 0 exosome 0 0.438718592767585 0.695066452026368 0 hPsi_site_5542 iPseU_CNN:0.695066452026368;iRNA_PseU:0 5543 chr1 10328300 10328300 1 + G T UCEC 10328300 + 10328280 10328320 41 CAGAAGAAACACGATAATGAGACCAACCTTTCCACTGAGAA CAGAAGAAACACGATAATGATACCAACCTTTCCACTGAGAA Direct Gain 0 0.949253268884598 0 0.996384024620056 prediction 0.898506537769196 Functional Gain - KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328300 chr1:10328300 nonsynonymous SNV 0.925 2 21 hPsi_associated_SNPs_106583 0 0 1 0 2 Cytosol 0 0.444057868885831 0.992768049240112 0 hPsi_site_5543 iPseU_CNN:0.992768049240112;iRNA_PseU:0 5544 chr5 10411614 10411614 1 + C A LUSC 10411614 - 10411594 10411634 41 TAAAGGTCGGCGGTAAGGCTGAAAGCCAACAGGCCCTCCCT TAAAGGTCGGCGGTAAGGCTTAAAGCCAACAGGCCCTCCCT Direct Gain 0 0.94925143075352 0 1 prediction 0.89850286150704 Functional Gain - MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411614 chr5:10411614 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106584 0 0 0 0 0 Nucleus 0 0.438718592995102 1 0 hPsi_site_5544 iPseU_CNN:1;iRNA_PseU:0 5545 chr7 146805249 146805249 1 + T A STAD 146805249 - 146805229 146805269 41 ACATGGCCATCAAAGTTGATAACATCAGCCCCTAAAACAAA ACATGGCCATCAAAGTTGATTACATCAGCCCCTAAAACAAA Direct Gain 0 0.949245038651231 0 0.0154036581516266 prediction 0.898490077302461 Functional Gain - CNTNAP2 ENSG00000174469 CDS Human protein_coding chr7:146805249 chr7:146805249 synonymous SNV . 0 21 hPsi_associated_SNPs_106585 0 0 0 0 0 Ribosome 0 0.438758174079577 0 0 hPsi_site_5545 iPseU_CNN:0;iRNA_PseU:0 5546 chr17 52993145 52993145 1 + G A LGG 52993145 - 52993125 52993165 41 GCGGACATCACTCGCACATTCATTTTCACCATATCCAATTC GCGGACATCACTCGCACATTTATTTTCACCATATCCAATTC Direct Gain 0 0.949243714128436 0 0.999146819114685 prediction 0.898487428256871 Functional Gain - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52993145 chr17:52993145 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106586 0 0 0 0 0 Cytosol 0 0.454757753959245 0.99829363822937 0 hPsi_site_5546 iPseU_CNN:0.99829363822937;iRNA_PseU:0 5547 chr16 34624175 34624175 1 + G A LUAD 34624175 - 34624155 34624195 41 GAGAGACTGTGTTACCCTTTCACATTCACCCTGGCAGCGAT GAGAGACTGTGTTACCCTTTTACATTCACCCTGGCAGCGAT Direct Gain 0 0.949235149630263 0 0.999833464622498 prediction 0.898470299260525 Functional Gain - LINC01566 ENSG00000259841;ENSG00000261689 ncRNA_exonic Human other chr16:34624175 chr16:34624175 . . 0 21 hPsi_associated_SNPs_106587 0 0 0 0 0 unknown 0 0.438528035090242 0.999666929244996 0 hPsi_site_5547 iPseU_CNN:0.999666929244996;iRNA_PseU:0 5548 chr5 173491306 173491306 1 + C A PAAD 173491306 - 173491286 173491326 41 AAACTGACCGTAAATTCAGCGATTTTCGGCACCCGGAACTT AAACTGACCGTAAATTCAGCTATTTTCGGCACCCGGAACTT Direct Gain 0 0.949234955832129 0 0.174101740121841 prediction 0.898469911664258 Functional Gain - HMP19 ENSG00000170091 CDS Human protein_coding chr5:173491306 chr5:173491306 synonymous SNV . 0 21 hPsi_associated_SNPs_106588 0 0 0 0 0 exosome 0 0.438719747526594 0 0 hPsi_site_5548 iPseU_CNN:0;iRNA_PseU:0 5549 chr1 13743064 13743064 1 + C T UCEC 13743064 + 13743044 13743084 41 TCCAAGCTGTGCTCGATGGGCTTGATGCACTGCTTACCCAC TCCAAGCTGTGCTCGATGGGTTTGATGCACTGCTTACCCAC Direct Gain 0 0.949234870527012 0 0.987462997436523 prediction 0.898469741054023 Functional Gain - PRAMEF20 ENSG00000204478 CDS Human protein_coding chr1:13743064 chr1:13743064 nonsynonymous SNV 0.017 1 21 hPsi_associated_SNPs_106589 0 0 0 0 1 unknown 0 0.438668851338058 0.974925994873046 0 hPsi_site_5549 iPseU_CNN:0.974925994873046;iRNA_PseU:0 5550 chr2 55462059 55462059 1 + G A HNSC 55462059 - 55462039 55462079 41 GCCAGCTTAACCTTCTTTCTCTTGTGCTTATTCTTCTTGGG GCCAGCTTAACCTTCTTTCTTTTGTGCTTATTCTTCTTGGG Direct Gain 0 0.949224512028492 0 0.88028085231781 prediction 0.898449024056985 Functional Gain - RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462059 chr2:55462059 synonymous SNV . 0 21 hPsi_associated_SNPs_106590 0 0 0 0 0 Ribosome 0 0.438719657652623 0.76056170463562 0 hPsi_site_5550 iPseU_CNN:0.76056170463562;iRNA_PseU:0 5551 chr4 8621152 8621152 1 + G A SKCM 8621152 - 8621132 8621172 41 CGCAGCCCATGAATAAAGTTCTTGGGTCCCATCCCCAGAGG CGCAGCCCATGAATAAAGTTTTTGGGTCCCATCCCCAGAGG Direct Gain 0 0.949223714137124 0 0.977573394775391 prediction 0.898447428274248 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8621152 chr4:8621152 synonymous SNV . 0 21 hPsi_associated_SNPs_106591 0 0 0 0 0 Endoplasmic reticulum 0 0.438718715523969 0.955146789550782 0 hPsi_site_5551 iPseU_CNN:0.955146789550782;iRNA_PseU:0 5552 chr17 60642414 60642414 1 + G A LUSC 60642414 - 60642394 60642434 41 CAGTAGTAAAGTGGCCCAGTCTCAAGCGGTCTTGCATGCTC CAGTAGTAAAGTGGCCCAGTTTCAAGCGGTCTTGCATGCTC Direct Gain 0 0.949223022552177 0 0.999971151351929 prediction 0.898446045104353 Functional Gain - TLK2 ENSG00000146872 CDS Human protein_coding chr17:60642414 chr17:60642414 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_106592 0 0 0 0 0 Cytosol 0 0.438718610477285 0.999942302703858 0 hPsi_site_5552 iPseU_CNN:0.999942302703858;iRNA_PseU:0 5553 chrX 153042366 153042366 1 + C T THCA 153042366 + 153042346 153042386 41 CAGATGGAGCAACAGTGGGGCTCGTCCCTCAGCTGCACCGT CAGATGGAGCAACAGTGGGGTTCGTCCCTCAGCTGCACCGT Direct Gain 0 0.949222054085105 0 0.999886393547058 prediction 0.898444108170209 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153042366 chrX:153042366 nonsynonymous SNV 0.449 4 21 hPsi_associated_SNPs_106593 0 0 0 0 1 Endoplasmic reticulum 0 0.438794970338091 0.999772787094116 0 hPsi_site_5553 iPseU_CNN:0.999772787094116;iRNA_PseU:0 5554 chr19 44531552 44531552 1 + C T LGG 44531552 + 44531532 44531572 41 GACTTTGCCTGTTCACAGGGCATCAACCATTCCATGGAGAT GACTTTGCCTGTTCACAGGGTATCAACCATTCCATGGAGAT Direct Gain 0 0.949219890046131 0 0.999931335449219 prediction 0.898439780092262 Functional Gain - ZNF222 ENSG00000159885;ENSG00000267022 CDS Human other chr19:44531552 chr19:44531552 nonsynonymous SNV 0.329 1 21 hPsi_associated_SNPs_106594 0 0 0 0 2 exosome 0 0.438698502472426 0.999862670898438 0 hPsi_site_5554 iPseU_CNN:0.999862670898438;iRNA_PseU:0 5555 chr16 84203737 84203737 1 + G A rs149158199 84203737 - 84203717 84203757 41 GGTCCCCTCTGGCTCTCCATCTCCGTCCTCTCCTTTAACCT GGTCCCCTCTGGCTCTCCATTTCCGTCCTCTCCTTTAACCT Direct Gain 0 0.949215231158943 0 0.919933676719666 prediction 0.898430462317887 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84203737 chr16:84203737 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_106595 2 0 0 0 0 Cytosol 0 0.438718592982852 0.839867353439332 0 hPsi_site_5555 iPseU_CNN:0.839867353439332;iRNA_PseU:0 5556 chr2 73717604 73717604 1 + G T LUSC 73717604 + 73717584 73717624 41 TCAAGGAAATTCAGATTTCTGATAACCATACCCTTATTAGC TCAAGGAAATTCAGATTTCTTATAACCATACCCTTATTAGC Direct Gain 0 0.949213922308104 0 0.00603294372558594 prediction 0.898427844616208 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73717604 chr2:73717604 nonsynonymous SNV 0.965 2 21 hPsi_associated_SNPs_106596 0 0 0 0 0 Nucleus 0 0.438718592995102 0 0 hPsi_site_5556 iPseU_CNN:0;iRNA_PseU:0 5557 chr20 13200555 13200555 1 + C T rs567508105 13200555 + 13200535 13200575 41 AAAGCAGTTGAATTAAGAATCTTAAATCTTTCTAGGACGCG AAAGCAGTTGAATTAAGAATTTTAAATCTTTCTAGGACGCG Direct Gain 0 0.949212126161835 0 0.999994158744812 prediction 0.898424252323669 Functional Gain - SPTLC3;ISM1 ENSG00000172296;ENSG00000101230 intergenic Human other chr20:13200555 chr20:13200555 . . 0 21 hPsi_associated_SNPs_106597 0 0 0 0 0 unknown 0 0.438722606024961 0.999988317489624 0 hPsi_site_5557 iPseU_CNN:0.999988317489624;iRNA_PseU:0 5558 chr12 41961666 41961666 1 + G A rs143454786 41961666 - 41961646 41961686 41 GGCAGTGGGCTGCATTGCTTCATTATGCTCTTCTTCCAACA GGCAGTGGGCTGCATTGCTTTATTATGCTCTTCTTCCAACA Direct Gain 0 0.949211607209984 0 0.972334861755371 prediction 0.898423214419967 Functional Gain - PDZRN4 ENSG00000165966 CDS Human protein_coding chr12:41961666 chr12:41961666 nonsynonymous SNV 0.934 1 21 hPsi_associated_SNPs_106598 0 0 0 0 0 exosome 0 0.438718909139917 0.944669723510742 0 hPsi_site_5558 iPseU_CNN:0.944669723510742;iRNA_PseU:0 5559 chr14 66028381 66028381 1 + G A LGG 66028381 - 66028361 66028401 41 GCTAGAGTGATCAGGATGGTCATTATCTCGTACCAAGTGAC GCTAGAGTGATCAGGATGGTTATTATCTCGTACCAAGTGAC Direct Gain 0 0.949211008215169 0 0.728259027004242 prediction 0.898422016430337 Functional Gain - FUT8 ENSG00000033170 CDS Human protein_coding chr14:66028381 chr14:66028381 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106599 0 0 0 0 0 Endoplasmic reticulum 0 0.434125808067162 0.456518054008484 0 hPsi_site_5559 iPseU_CNN:0.456518054008484;iRNA_PseU:0 5560 chr7 102940667 102940667 1 + G A LUSC 102940667 - 102940647 102940687 41 GAGATGAGCACCCATATTTTCAATCTCAAGTTCCAGATCTA GAGATGAGCACCCATATTTTTAATCTCAAGTTCCAGATCTA Direct Gain 0 0.949209706686067 0 0.369066596031189 prediction 0.898419413372134 Functional Gain - PMPCB ENSG00000105819 CDS Human protein_coding chr7:102940667 chr7:102940667 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106600 0 0 0 0 0 Ribosome 0 0.43871880214234 0 0 hPsi_site_5560 iPseU_CNN:0;iRNA_PseU:0 5561 chr9 88455095 88455095 1 + G A rs568499149 88455095 - 88455075 88455115 41 GTGGAGGACCTCATCTCGTTCTTCTACGTGATCCAACAGCA GTGGAGGACCTCATCTCGTTTTTCTACGTGATCCAACAGCA Direct Gain 0 0.949206517660697 0 0.999815404415131 prediction 0.898413035321395 Functional Gain - LOC389765 ENSG00000165121 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:88455095 chr9:88455095 . . 0 21 hPsi_associated_SNPs_106601 0 0 0 0 0 unknown 0 0.438777739170476 0.999630808830262 0 hPsi_site_5561 iPseU_CNN:0.999630808830262;iRNA_PseU:0 5562 chr1 228469773 228469773 1 + C T UCEC 228469773 + 228469753 228469793 41 GGTGGGAAGACAGTGGGCAGCTCCAGCCGCTTCCAGGCCAC GGTGGGAAGACAGTGGGCAGTTCCAGCCGCTTCCAGGCCAC Direct Gain 0 0.949203525378086 0 0.402590334415436 prediction 0.898407050756172 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228469773 chr1:228469773 synonymous SNV . 0 21 hPsi_associated_SNPs_106602 0 0 0 0 0 Ribosome 0 0.438728174364638 0 0 hPsi_site_5562 iPseU_CNN:0;iRNA_PseU:0 5563 chr6 84569524 84569524 1 + C T HNSC 84569524 + 84569504 84569544 41 GCTGAACGTCCCTTCCCAGTCTTTCCCGGCCCCCAGGTCGC GCTGAACGTCCCTTCCCAGTTTTTCCCGGCCCCCAGGTCGC Direct Gain 0 0.949199594775787 0 0.406706005334854 prediction 0.898399189551573 Functional Gain - CYB5R4 ENSG00000065615 CDS Human protein_coding chr6:84569524 chr6:84569524 nonsynonymous SNV 0.904 1 21 hPsi_associated_SNPs_106603 0 0 1 0 1 Ribosome 0 0.438748848900604 0 0 hPsi_site_5563 iPseU_CNN:0;iRNA_PseU:0 5564 chr6 44107469 44107469 1 + G T UCEC 44107469 + 44107449 44107489 41 CAATGCCTACAGCTTTGGGAGAACCACCATTGCCAACTTGA CAATGCCTACAGCTTTGGGATAACCACCATTGCCAACTTGA Direct Gain 0 0.949198353929433 0 0.980183720588684 prediction 0.898396707858867 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107469 chr6:44107469 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106604 0 0 1 2 0 Ribosome 0 0.43871874045086 0.960367441177368 0 hPsi_site_5564 iPseU_CNN:0.960367441177368;iRNA_PseU:0 5565 chr3 85961570 85961570 1 + G T COAD 85961570 + 85961550 85961590 41 CAAATCGCAAGACATTCACTGTCAGCAGCACACTGGACTTC CAAATCGCAAGACATTCACTTTCAGCAGCACACTGGACTTC Direct Gain 0 0.949191933818508 0 0.999680697917938 prediction 0.898383867637016 Functional Gain - CADM2 ENSG00000175161 CDS Human protein_coding chr3:85961570 chr3:85961570 nonsynonymous SNV 0.980 4 21 hPsi_associated_SNPs_106605 0 0 1 0 1 Nucleus 0 0.437403674042149 0.999361395835876 0 hPsi_site_5565 iPseU_CNN:0.999361395835876;iRNA_PseU:0 5566 chr19 57910108 57910108 1 + G T UCEC 57910108 + 57910088 57910128 41 AGAGTTCACATGGCAGAGGAGATCTTCACATGCATGGAGGG AGAGTTCACATGGCAGAGGATATCTTCACATGCATGGAGGG Direct Gain 0 0.949191818859338 0 0.111662566661835 prediction 0.898383637718676 Functional Gain - ZNF548 ENSG00000188785 CDS Human protein_coding chr19:57910108 chr19:57910108 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_106606 0 0 1 0 0 Nucleus 0 0.438718595312268 0 0 hPsi_site_5566 iPseU_CNN:0;iRNA_PseU:0 5567 chr4 25678327 25678327 1 + G A SKCM 25678327 - 25678307 25678347 41 TGAGTCCGAGGCAGGGACCTCACCCTGAGCCTCTCTGCTAA TGAGTCCGAGGCAGGGACCTTACCCTGAGCCTCTCTGCTAA Direct Gain 0 0.949190849343839 0 0.999033451080322 prediction 0.898381698687679 Functional Gain - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25678327 chr4:25678327 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106607 0 0 0 0 0 nucleus 0 0.43851726195372 0.998066902160644 0 hPsi_site_5567 iPseU_CNN:0.998066902160644;iRNA_PseU:0 5568 chr9 37733499 37733499 1 + C A UCEC 37733499 - 37733479 37733519 41 TGTTTCGGAGTAAAGTTGGAGATATAAAGTTCTCTATTCCC TGTTTCGGAGTAAAGTTGGATATATAAAGTTCTCTATTCCC Direct Gain 0 0.949190567970278 0 0.873415946960449 prediction 0.898381135940556 Functional Gain - FRMPD1 ENSG00000070601 CDS Human protein_coding chr9:37733499 chr9:37733499 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106608 0 0 0 0 0 exosome 0 0.438725723859159 0.746831893920898 0 hPsi_site_5568 iPseU_CNN:0.746831893920898;iRNA_PseU:0 5569 chr13 50587103 50587103 1 + G A SKCM 50587103 - 50587083 50587123 41 GCCTTTCCAAGTTGCCAGGTCATCAAATAATGACCATTCTA GCCTTTCCAAGTTGCCAGGTTATCAAATAATGACCATTCTA Direct Gain 0 0.949188098950375 0 0.990885734558105 prediction 0.898376197900749 Functional Gain - TRIM13 ENSG00000204977 CDS Human protein_coding chr13:50587103 chr13:50587103 nonsynonymous SNV 0.977 0 21 hPsi_associated_SNPs_106609 0 0 1 0 0 Endoplasmic reticulum 0 0.438718592971086 0.98177146911621 0 hPsi_site_5569 iPseU_CNN:0.98177146911621;iRNA_PseU:0 5570 chr1 10511631 10511631 1 + G T UCEC 10511631 + 10511611 10511651 41 TGCAGGAACTTCTTCTGGAAGACCTTCTCCTCCTGCAAATA TGCAGGAACTTCTTCTGGAATACCTTCTCCTCCTGCAAATA Direct Gain 0 0.94918574542713 0 0.999752998352051 prediction 0.898371490854259 Functional Gain - CENPS-CORT;CORT ENSG00000175279;ENSG00000241563;ENSG00000251503 CDS Human other chr1:10511631 chr1:10511631 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106610 0 0 0 1 0 unknown 0 0.438718367458187 0.999505996704102 0 hPsi_site_5570 iPseU_CNN:0.999505996704102;iRNA_PseU:0 5571 chr19 58869380 58869380 1 + G A rs75819328 58869380 - 58869360 58869400 41 TGGAGTCTCCACCTTCTTGACACTTGGGGCCCCACCCTGTG TGGAGTCTCCACCTTCTTGATACTTGGGGCCCCACCCTGTG Direct Gain 0 0.949182182262122 0 0.999953150749207 prediction 0.898364364524243 Functional Gain - ZNF497 ENSG00000174586 CDS Human protein_coding chr19:58869380 chr19:58869380 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106611 0 0 0 0 1 Nucleus 0 0.438718592995096 0.999906301498414 0 hPsi_site_5571 iPseU_CNN:0.999906301498414;iRNA_PseU:0 5572 chr15 38643846 38643846 1 + A T LAML 38643846 + 38643826 38643866 41 ATGTGGTTGCTGTGGTGGGAAACATAAAGCTGCTGGATGAA ATGTGGTTGCTGTGGTGGGATACATAAAGCTGCTGGATGAA Direct Gain 0 0.949178962848545 0 0.859046816825867 prediction 0.898357925697091 Functional Gain - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38643846 chr15:38643846 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_106612 0 0 0 0 0 Ribosome 0 0.438720332884584 0.718093633651734 0 hPsi_site_5572 iPseU_CNN:0.718093633651734;iRNA_PseU:0 5573 chr14 95090004 95090004 1 + C T LUAD 95090004 + 95089984 95090024 41 GGCACAGAAGCATCTGCTGCCACAGCAGTCAAAATCACCCT GGCACAGAAGCATCTGCTGCTACAGCAGTCAAAATCACCCT Direct Gain 0 0.949178657065353 0 0.989379346370697 prediction 0.898357314130707 Functional Gain - SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95090004 chr14:95090004 synonymous SNV . 0 21 hPsi_associated_SNPs_106613 0 0 1 0 1 cytosol 0 0.438864076018593 0.978758692741394 0 hPsi_site_5573 iPseU_CNN:0.978758692741394;iRNA_PseU:0 5574 chr1 16256891 16256891 1 + G A GBM 16256891 - 16256871 16256911 41 TGAGTGGGATTTGTGTTCACCATCTTCGTCAGAATCAGAAG TGAGTGGGATTTGTGTTCACTATCTTCGTCAGAATCAGAAG Direct Gain 0 0.949173437652162 0 0.97797691822052 prediction 0.898346875304324 Functional Gain - SPEN ENSG00000065526 CDS Human protein_coding chr1:16256891 chr1:16256891 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_106614 0 0 0 0 0 Endoplasmic reticulum 0 0.438357120980243 0.95595383644104 0 hPsi_site_5574 iPseU_CNN:0.95595383644104;iRNA_PseU:0 5575 chr1 235505800 235505800 1 + G T LUSC 235505800 + 235505780 235505820 41 GTGAAAACAAAAGTTTTTGTGAAGATCTGACAGAGGGAAAG GTGAAAACAAAAGTTTTTGTTAAGATCTGACAGAGGGAAAG Direct Gain 0 0.949169592401338 0 0.985519111156464 prediction 0.898339184802677 Functional Gain - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505800 chr1:235505800 stopgain 1.000 1 21 hPsi_associated_SNPs_106615 0 0 1 0 0 Ribosome 0 0.438733460861835 0.971038222312928 0 hPsi_site_5575 iPseU_CNN:0.971038222312928;iRNA_PseU:0 5576 chr1 16257911 16257911 1 + G A KIRP 16257911 - 16257891 16257931 41 ATCCAGATAAGGCGGCTGGTCACCTGATGAACCTTCCTCAA ATCCAGATAAGGCGGCTGGTTACCTGATGAACCTTCCTCAA Direct Gain 0 0.94916594581421 0 0.999994814395905 prediction 0.898331891628421 Functional Gain - SPEN ENSG00000065526 CDS Human protein_coding chr1:16257911 chr1:16257911 nonsynonymous SNV 0.017 1 21 hPsi_associated_SNPs_106616 0 0 0 0 0 Endoplasmic reticulum 0 0.438711148689152 0.99998962879181 0 hPsi_site_5576 iPseU_CNN:0.99998962879181;iRNA_PseU:0 5577 chr7 106509918 106509918 1 + G A SKCM 106509918 - 106509898 106509938 41 TGCAATGGCTCTTACATTTTCATCTGAGAAGTTGCAGTCCA TGCAATGGCTCTTACATTTTTATCTGAGAAGTTGCAGTCCA Direct Gain 0 0.94916456228624 0 0.999640166759491 prediction 0.89832912457248 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509918 chr7:106509918 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_106617 0 0 0 0 0 Cytosol 0 0.438706817732285 0.999280333518982 0 hPsi_site_5577 iPseU_CNN:0.999280333518982;iRNA_PseU:0 5578 chr5 31317842 31317842 1 + C A COAD 31317842 - 31317822 31317862 41 TGAAATGACCACAGGCAAGAGATAGGTGCTCATCTCGTGTC TGAAATGACCACAGGCAAGATATAGGTGCTCATCTCGTGTC Direct Gain 0 0.949161372196792 0 0.851943731307983 prediction 0.898322744393584 Functional Gain - CDH6 ENSG00000113361 CDS Human protein_coding chr5:31317842 chr5:31317842 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106618 0 0 0 0 0 exosome 0 0.438718571022881 0.703887462615966 0 hPsi_site_5578 iPseU_CNN:0.703887462615966;iRNA_PseU:0 5579 chr4 1732910 1732910 1 + G A ESCA 1732910 - 1732890 1732930 41 AGCGAGGTGCTGGCAGAGTTCAAGGCTCTCTCCTGGAGGAA AGCGAGGTGCTGGCAGAGTTTAAGGCTCTCTCCTGGAGGAA Direct Gain 0 0.949157572320353 0 0.999769628047943 prediction 0.898315144640706 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1732910 chr4:1732910 synonymous SNV 0.000 0 21 hPsi_associated_SNPs_106619 0 0 0 0 0 Cytosol 0 0.438713521642981 0.999539256095886 0 hPsi_site_5579 iPseU_CNN:0.999539256095886;iRNA_PseU:0 5580 chr2 54755205 54755205 1 + G A rs138070959 54755205 - 54755185 54755225 41 AGAGTGACTGATTAATCATTCATTCAGGCCAGCTCAAGAAA AGAGTGACTGATTAATCATTTATTCAGGCCAGCTCAAGAAA Direct Gain 0 0.949156648616136 0 0.999536514282227 prediction 0.898313297232271 Functional Gain - SPTBN1 ENSG00000228108 ncRNA_intronic Human antisense chr2:54755205 chr2:54755205 . . 0 21 hPsi_associated_SNPs_106620 0 0 0 0 0 Nucleus 0 0.445690194820464 0.999073028564454 0 hPsi_site_5580 iPseU_CNN:0.999073028564454;iRNA_PseU:0 5581 chr2 47220609 47220609 1 + G A LGG 47220609 - 47220589 47220629 41 GCAGCACCTCCCGGAGCTCTCTCATGCCCTTCACGATGTTC GCAGCACCTCCCGGAGCTCTTTCATGCCCTTCACGATGTTC Direct Gain 0 0.949155479010676 0 0.998963356018066 prediction 0.898310958021353 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47220609 chr2:47220609 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_106621 0 0 0 0 0 Nucleus 0 0.438718593027923 0.997926712036132 0 hPsi_site_5581 iPseU_CNN:0.997926712036132;iRNA_PseU:0 5582 chr7 155093355 155093355 1 + C T UCEC 155093355 + 155093335 155093375 41 AAGAGAGAATGGGCCAGTGTCATGCGCTGCATAGCAGTTTT AAGAGAGAATGGGCCAGTGTTATGCGCTGCATAGCAGTTTT Direct Gain 0 0.94915186802523 0 0.0153302848339081 prediction 0.898303736050459 Functional Gain - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155093355 chr7:155093355 synonymous SNV . 0 21 hPsi_associated_SNPs_106622 0 0 1 0 2 Endoplasmic reticulum 0 0.43871412732836 0 0 hPsi_site_5582 iPseU_CNN:0;iRNA_PseU:0 5583 chr17 30632388 30632388 1 + G A OV 30632388 - 30632368 30632408 41 GAGCCCACGACTGGAGCGGTCATGTCAGCCACAGACACTGC GAGCCCACGACTGGAGCGGTTATGTCAGCCACAGACACTGC Direct Gain 0 0.949148867876077 0 0.977437257766724 prediction 0.898297735752154 Functional Gain - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30632388 chr17:30632388 nonsynonymous SNV 0.967 3 21 hPsi_associated_SNPs_106623 0 0 0 0 0 cytosol 0 0.439314282529037 0.954874515533448 0 hPsi_site_5583 iPseU_CNN:0.954874515533448;iRNA_PseU:0 5584 chr1 213446185 213446185 1 + C T rs180936383 213446185 + 213446165 213446205 41 GTGCCAGGGGCTGTTATATACATATATACACAACCAAGGTG GTGCCAGGGGCTGTTATATATATATATACACAACCAAGGTG Direct Gain 0 0.949148655757249 0 0.697775423526764 prediction 0.898297311514498 Functional Gain - RPS6KC1 ENSG00000136643 UTR3 Human protein_coding chr1:213446185 chr1:213446185 . . 0 21 hPsi_associated_SNPs_106624 0 0 1 0 0 Nucleus 0 0.438718598181675 0.395550847053528 0 hPsi_site_5584 iPseU_CNN:0.395550847053528;iRNA_PseU:0 5585 chr4 17625328 17625328 1 + G A UCEC 17625328 - 17625308 17625348 41 TCGGCGGGCTTTTTGTGCTGCACGTTGATGTCCTCCAGCAC TCGGCGGGCTTTTTGTGCTGTACGTTGATGTCCTCCAGCAC Direct Gain 0 0.949148485558036 0 0.99999213218689 prediction 0.898296971116072 Functional Gain - MED28 ENSG00000118579 CDS Human protein_coding chr4:17625328 chr4:17625328 synonymous SNV . 0 21 hPsi_associated_SNPs_106625 0 0 0 0 0 Ribosome 0 0.438293205365131 0.99998426437378 0 hPsi_site_5585 iPseU_CNN:0.99998426437378;iRNA_PseU:0 5586 chr17 78319648 78319648 1 + C T SKCM 78319648 + 78319628 78319668 41 TCAAAGAAGTCCTGTGTGATCATATGGTGGATGGCCAGCCT TCAAAGAAGTCCTGTGTGATTATATGGTGGATGGCCAGCCT Direct Gain 0 0.949143479788521 0 0.743740200996399 prediction 0.898286959577042 Functional Gain - RNF213 ENSG00000173821 CDS Human protein_coding chr17:78319648 chr17:78319648 nonsynonymous SNV 0.012 0 21 hPsi_associated_SNPs_106626 0 0 1 0 0 Nucleus 0 0.438629450188227 0.487480401992798 0 hPsi_site_5586 iPseU_CNN:0.487480401992798;iRNA_PseU:0 5587 chr4 120193037 120193037 1 + G A STAD 120193037 - 120193017 120193057 41 ATCTGCCAATTATCACCATGCACTTTACCCTCTACAAGGCC ATCTGCCAATTATCACCATGTACTTTACCCTCTACAAGGCC Direct Gain 0 0.949142700897263 0 0.999998927116394 prediction 0.898285401794527 Functional Gain - USP53 ENSG00000145390 CDS Human protein_coding chr4:120193037 chr4:120193037 synonymous SNV . 0 21 hPsi_associated_SNPs_106627 0 0 0 0 0 Nucleus 0 0.438703456992034 0.999997854232788 0 hPsi_site_5587 iPseU_CNN:0.999997854232788;iRNA_PseU:0 5588 chr7 94293201 94293201 1 + C A UCEC 94293201 - 94293181 94293221 41 ACACGGACACGATCAACTGAGAAATCCCTGGTGCTCTTTTC ACACGGACACGATCAACTGATAAATCCCTGGTGCTCTTTTC Direct Gain 0 0.949129275487337 0 0.999501585960388 prediction 0.898258550974675 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293201 chr7:94293201 nonsynonymous SNV 0.977 3 21 hPsi_associated_SNPs_106628 0 0 0 0 0 Endoplasmic reticulum 0 0.438718506866925 0.999003171920776 0 hPsi_site_5588 iPseU_CNN:0.999003171920776;iRNA_PseU:0 5589 chr11 123810992 123810992 1 + C T SARC 123810992 + 123810972 123811012 41 TCGTACACAGCACTGCTAGTCATGCTCCGAAGCCACTCACG TCGTACACAGCACTGCTAGTTATGCTCCGAAGCCACTCACG Direct Gain 0 0.949123085648817 0 0.990185260772705 prediction 0.898246171297634 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123810992 chr11:123810992 synonymous SNV . 0 21 hPsi_associated_SNPs_106629 0 0 0 0 0 exosome 0 0.438539352346321 0.98037052154541 0 hPsi_site_5589 iPseU_CNN:0.98037052154541;iRNA_PseU:0 5590 chr22 39387531 39387531 1 + C T rs200377379 39387531 + 39387511 39387551 41 AACACACACGTGAGACTGCGCATCTTCGCTGCCCGCATCTA AACACACACGTGAGACTGCGTATCTTCGCTGCCCGCATCTA Direct Gain 0 0.94912224527872 0 0.762817978858948 prediction 0.898244490557441 Functional Gain - APOBEC3B ENSG00000179750 CDS Human protein_coding chr22:39387531 chr22:39387531 synonymous SNV . 0 21 hPsi_associated_SNPs_106630 0 0 0 0 0 exosome 0 0.4392261915216 0.525635957717896 0 hPsi_site_5590 iPseU_CNN:0.525635957717896;iRNA_PseU:0 5591 chr2 149226272 149226272 1 + A T LUSC 149226272 + 149226252 149226292 41 CTGATGTTTTCACAAGAAGTAATCCTGGTTTTCATGGAGCT CTGATGTTTTCACAAGAAGTTATCCTGGTTTTCATGGAGCT Direct Gain 0 0.949122240851499 0 0.999893426895142 prediction 0.898244481702998 Functional Gain - MBD5 ENSG00000204406 CDS Human protein_coding chr2:149226272 chr2:149226272 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106631 0 0 0 0 0 chromatin 0 0.438719445443948 0.999786853790284 0 hPsi_site_5591 iPseU_CNN:0.999786853790284;iRNA_PseU:0 5592 chr2 30569937 30569937 1 + G A rs538753471 30569937 - 30569917 30569957 41 GTGGAGCCCAGCACTTAGCTCAAGCCAGGCGGCGTCACCGC GTGGAGCCCAGCACTTAGCTTAAGCCAGGCGGCGTCACCGC Direct Gain 0 0.949118417282676 0 0.999897122383118 prediction 0.898236834565352 Functional Gain - LOC285043 ENSG00000235997 ncRNA_exonic Human lincRNA chr2:30569937 chr2:30569937 . . 0 21 hPsi_associated_SNPs_106632 0 0 0 0 0 unknown 0 0.438718349749033 0.999794244766236 0 hPsi_site_5592 iPseU_CNN:0.999794244766236;iRNA_PseU:0 5593 chr11 99690341 99690341 1 + C T SKCM 99690341 + 99690321 99690361 41 GTTAAGAATTAAGAAGAGTTCATCTTCATCTCTCTTTGGTT GTTAAGAATTAAGAAGAGTTTATCTTCATCTCTCTTTGGTT Direct Gain 0 0.94911508900478 0 0.987132549285889 prediction 0.89823017800956 Functional Gain - CNTN5 ENSG00000149972 CDS Human protein_coding chr11:99690341 chr11:99690341 nonsynonymous SNV 0.962 1 21 hPsi_associated_SNPs_106633 0 0 0 0 0 Endoplasmic reticulum 0 0.438727817652421 0.974265098571778 0 hPsi_site_5593 iPseU_CNN:0.974265098571778;iRNA_PseU:0 5594 chr9 713094 713094 1 + G A LUAD 713094 - 713074 713114 41 GGCCCACAAGCTATAGTCCTCATTTTGAGACCAACCAGATA GGCCCACAAGCTATAGTCCTTATTTTGAGACCAACCAGATA Direct Gain 0 0.949108940419274 0 0.999921083450317 prediction 0.898217880838548 Functional Gain - KANK1 ENSG00000107104 CDS Human protein_coding chr9:713094 chr9:713094 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106634 0 0 0 0 0 Nucleus 0 0.438735105620587 0.999842166900634 0 hPsi_site_5594 iPseU_CNN:0.999842166900634;iRNA_PseU:0 5595 chr18 67425038 67425038 1 + C A COAD 67425038 - 67425018 67425058 41 AGTACGCGCTGCGAGGAAGAGATATTGATTTGGATAATGTC AGTACGCGCTGCGAGGAAGATATATTGATTTGGATAATGTC Direct Gain 0 0.949105806347805 0 0.582489788532257 prediction 0.898211612695609 Functional Gain - DOK6 ENSG00000206052 CDS Human protein_coding chr18:67425038 chr18:67425038 nonsynonymous SNV 0.986 3 21 hPsi_associated_SNPs_106635 0 0 0 0 0 Endoplasmic reticulum 0 0.438718682642124 0.164979577064514 0 hPsi_site_5595 iPseU_CNN:0.164979577064514;iRNA_PseU:0 5596 chr10 106924133 106924133 1 + G T UCEC 106924133 + 106924113 106924153 41 CGATGGGGGCAACACATGGAGACAGGTAACTGGGTGAATTG CGATGGGGGCAACACATGGATACAGGTAACTGGGTGAATTG Direct Gain 0 0.949105151873289 0 0.958487749099731 prediction 0.898210303746579 Functional Gain - SORCS3 ENSG00000156395 CDS Human protein_coding chr10:106924133 chr10:106924133 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106636 0 0 0 0 2 exosome 0 0.438718599138716 0.916975498199462 0 hPsi_site_5596 iPseU_CNN:0.916975498199462;iRNA_PseU:0 5597 chr19 10822892 10822892 1 + G A LUSC 10822892 - 10822872 10822912 41 CGCCAGAACTGCGACTTGCTCTCACCCCCGCTCAGGCCCCC CGCCAGAACTGCGACTTGCTTTCACCCCCGCTCAGGCCCCC Direct Gain 0 0.949092057493453 0 0.824971675872803 prediction 0.898184114986906 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10822892 chr19:10822892 synonymous SNV . 0 21 hPsi_associated_SNPs_106637 0 0 0 0 0 Ribosome 0 0.438717718027238 0.649943351745606 0 hPsi_site_5597 iPseU_CNN:0.649943351745606;iRNA_PseU:0 5598 chr19 55258808 55258808 1 + C T rs35861855 55258808 + 55258788 55258828 41 AAACCCTTCAAATAGTTGGCCTTCACCCACTGAACCAAGCT AAACCCTTCAAATAGTTGGCTTTCACCCACTGAACCAAGCT Direct Gain 0 0.949089678935638 0 0.999472379684448 prediction 0.898179357871275 Functional Gain - KIR2DL3 ENSG00000243772 CDS Human protein_coding chr19:55258808 chr19:55258808 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106638 0 0 0 0 2 exosome 0 0.438715105878503 0.998944759368896 0 hPsi_site_5598 iPseU_CNN:0.998944759368896;iRNA_PseU:0 5599 chr1 174606603 174606603 1 + G A HNSC 174606603 - 174606583 174606623 41 GCAGATCTTATAGAGCGATTCTTGACCATCTCCTCCAGTAT GCAGATCTTATAGAGCGATTTTTGACCATCTCCTCCAGTAT Direct Gain 0 0.949086100748514 0 0.939810276031494 prediction 0.898172201497029 Functional Gain - RABGAP1L ENSG00000152061 CDS Human protein_coding chr1:174606603 chr1:174606603 nonsynonymous SNV 0.983 2 21 hPsi_associated_SNPs_106639 0 0 0 0 0 Nucleus 0 0.438718672137562 0.879620552062988 0 hPsi_site_5599 iPseU_CNN:0.879620552062988;iRNA_PseU:0 5600 chr2 131128796 131128796 1 + G A CESC 131128796 - 131128776 131128816 41 GGGAGTCCGGAGGAAGAGGGCATCGTCGTAGAGTGGGGCAC GGGAGTCCGGAGGAAGAGGGTATCGTCGTAGAGTGGGGCAC Direct Gain 0 0.949076928148229 0 0.999999523162842 prediction 0.898153856296459 Functional Gain - PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131128796 chr2:131128796 nonsynonymous SNV 0.050 2 21 hPsi_associated_SNPs_106640 0 0 0 0 0 Cytosol 0 0.437164074872648 0.999999046325684 0 hPsi_site_5600 iPseU_CNN:0.999999046325684;iRNA_PseU:0 5601 chr15 33999125 33999125 1 + G A STAD 33999125 - 33999105 33999145 41 CCACAGCCTGCCAAGTAGGTCACCACCTGCCAGAAACAGTA CCACAGCCTGCCAAGTAGGTTACCACCTGCCAGAAACAGTA Direct Gain 0 0.949067404039014 0 0.995936155319214 prediction 0.898134808078028 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:33999125 chr15:33999125 synonymous SNV . 0 21 hPsi_associated_SNPs_106641 0 0 0 0 0 exosome 0 0.438718590633854 0.991872310638428 0 hPsi_site_5601 iPseU_CNN:0.991872310638428;iRNA_PseU:0 5602 chr20 37146211 37146211 1 + C T ESCA 37146211 + 37146191 37146231 41 TGAATAGATTAAGTATGCCTCAAAGTGCTGCTGTCAGTACC TGAATAGATTAAGTATGCCTTAAAGTGCTGCTGTCAGTACC Direct Gain 0 0.949064668068362 0 0.996004998683929 prediction 0.898129336136724 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37146211 chr20:37146211 stopgain 0.995 1 21 hPsi_associated_SNPs_106642 0 0 1 0 2 Nucleus 0 0.438700854276636 0.992009997367858 0 hPsi_site_5602 iPseU_CNN:0.992009997367858;iRNA_PseU:0 5603 chr11 74460030 74460030 1 + G A UCEC 74460030 - 74460010 74460050 41 GCCGGGCCTGGGGCCCCAGTCTTAGCTGCCGCCGTCTCGTC GCCGGGCCTGGGGCCCCAGTTTTAGCTGCCGCCGTCTCGTC Direct Gain 0 0.949053095909081 0 0.999999165534973 prediction 0.898106191818161 Functional Gain - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74460030 chr11:74460030 synonymous SNV . 0 21 hPsi_associated_SNPs_106643 0 0 0 0 0 Nucleus 0 0.438723669621593 0.999998331069946 0 hPsi_site_5603 iPseU_CNN:0.999998331069946;iRNA_PseU:0 5604 chr12 53449433 53449433 1 + C T UCEC 53449433 + 53449413 53449453 41 GCAAAGCCATGGAGACATGGCTCAGTGCTGACCCACAGCAC GCAAAGCCATGGAGACATGGTTCAGTGCTGACCCACAGCAC Direct Gain 0 0.94905223721968 0 0.98443865776062 prediction 0.89810447443936 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53449433 chr12:53449433 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_106644 0 0 1 0 2 cytosol 0 0.438718719510022 0.96887731552124 0 hPsi_site_5604 iPseU_CNN:0.96887731552124;iRNA_PseU:0 5605 chr6 7600429 7600429 1 + G T rs187711547 7600429 + 7600409 7600449 41 ATATTGTTATGTATAGCCGTGTTAAACCATGGCCTCAGATT ATATTGTTATGTATAGCCGTTTTAAACCATGGCCTCAGATT Direct Gain 0 0.949051395277897 0 0.998260021209717 prediction 0.898102790555793 Functional Gain - SNRNP48 ENSG00000168566 intronic Human protein_coding chr6:7600429 chr6:7600429 . . 0 21 hPsi_associated_SNPs_106645 0 0 1 0 0 Ribosome 0 0.439872136374667 0.996520042419434 0 hPsi_site_5605 iPseU_CNN:0.996520042419434;iRNA_PseU:0 5606 chr20 9510426 9510426 1 + C T LGG 9510426 + 9510406 9510446 41 AAATGACTGCCAACCAGGTGCAGATCCCTCGGGACAGATCC AAATGACTGCCAACCAGGTGTAGATCCCTCGGGACAGATCC Direct Gain 0 0.94904941502388 0 0.99859344959259 prediction 0.89809883004776 Functional Gain - LAMP5 ENSG00000125869 CDS Human protein_coding chr20:9510426 chr20:9510426 stopgain 1.000 1 21 hPsi_associated_SNPs_106646 0 0 0 0 0 exosome 0 0.438718599284364 0.99718689918518 0 hPsi_site_5606 iPseU_CNN:0.99718689918518;iRNA_PseU:0 5607 chr16 56970275 56970275 1 + C T rs147770832 56970275 + 56970255 56970295 41 GCTGGGTTGTATTTATAAATCTTGTTGGTCAGATGTCTGCA GCTGGGTTGTATTTATAAATTTTGTTGGTCAGATGTCTGCA Direct Gain 0 0.949044064861609 0 0.378128111362457 prediction 0.898088129723219 Functional Gain - HERPUD1 ENSG00000051108 intronic Human protein_coding chr16:56970275 chr16:56970275 . . 0 21 hPsi_associated_SNPs_106647 0 0 1 0 0 Ribosome 0 0.404522781096563 0 0 hPsi_site_5607 iPseU_CNN:0;iRNA_PseU:0 5608 chr9 130423462 130423462 1 + C T UCEC 130423462 + 130423442 130423482 41 TCTGACGGAAATCAATATTGCATTTCTCCCGTATGAATCCC TCTGACGGAAATCAATATTGTATTTCTCCCGTATGAATCCC Direct Gain 0 0.94904366799794 0 0.999976634979248 prediction 0.898087335995881 Functional Gain - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130423462 chr9:130423462 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_106648 0 0 1 0 2 Cytosol 0 0.438721629263191 0.999953269958496 0 hPsi_site_5608 iPseU_CNN:0.999953269958496;iRNA_PseU:0 5609 chr10 124336138 124336138 1 + G A LGG 124336138 - 124336118 124336158 41 GATTCGTGTCCTGAGCAGCGCACATCATCCAGGGCAATGGG GATTCGTGTCCTGAGCAGCGTACATCATCCAGGGCAATGGG Direct Gain 0 0.949043483810286 0 0.539306461811066 prediction 0.898086967620571 Functional Gain - DMBT1 ENSG00000187908 CDS Human protein_coding chr10:124336138 chr10:124336138 synonymous SNV . 0 21 hPsi_associated_SNPs_106649 0 0 0 0 0 exosome 0 0.438718597053841 0.078612923622132 0 hPsi_site_5609 iPseU_CNN:0.078612923622132;iRNA_PseU:0 5610 chr17 66127338 66127338 1 + A T rs6501362 66127338 + 66127318 66127358 41 GTGGCAAAATCGTAGCTCACAACAGCCTCGACCCCCACCCT GTGGCAAAATCGTAGCTCACTACAGCCTCGACCCCCACCCT Direct Gain 0 0.949043344714416 0 0.993728280067444 prediction 0.898086689428832 Functional Gain - LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66127338 chr17:66127338 . . 0 21 hPsi_associated_SNPs_106650 0 0 1 0 0 unknown 0 0.438718579907445 0.987456560134888 0 hPsi_site_5610 iPseU_CNN:0.987456560134888;iRNA_PseU:0 5611 chr15 33988507 33988507 1 + C A COAD 33988507 - 33988487 33988527 41 TACTGCCTCCGGAGGAGGTTGAACATCATTCGGACCAGCTC TACTGCCTCCGGAGGAGGTTTAACATCATTCGGACCAGCTC Direct Gain 0 0.949033490593552 0 0.626649737358093 prediction 0.898066981187105 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:33988507 chr15:33988507 nonsynonymous SNV 0.992 2 21 hPsi_associated_SNPs_106651 0 0 0 0 0 exosome 0 0.438718592739499 0.253299474716186 0 hPsi_site_5611 iPseU_CNN:0.253299474716186;iRNA_PseU:0 5612 chr19 44739479 44739479 1 + G T COAD 44739479 + 44739459 44739499 41 AGGAGAGAAACTCAATAGATGTCATGAATCTGGTGATTGCT AGGAGAGAAACTCAATAGATTTCATGAATCTGGTGATTGCT Direct Gain 0 0.949027627849678 0 0.972400188446045 prediction 0.898055255699355 Functional Gain - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44739479 chr19:44739479 nonsynonymous SNV 0.007 1 21 hPsi_associated_SNPs_106652 0 0 1 0 0 cytosol 0 0.438740564459835 0.94480037689209 0 hPsi_site_5612 iPseU_CNN:0.94480037689209;iRNA_PseU:0 5613 chr8 56436091 56436091 1 + G A BLCA 56436091 - 56436071 56436111 41 GGTGATACAGAATTCTGTCTCACAGTGGACGATCCAGAAGG GGTGATACAGAATTCTGTCTTACAGTGGACGATCCAGAAGG Direct Gain 0 0.949027483013518 0 0.957910895347595 prediction 0.898054966027036 Functional Gain - XKR4 ENSG00000206579 CDS Human protein_coding chr8:56436091 chr8:56436091 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106653 0 0 0 0 0 exosome 0 0.438699974859156 0.91582179069519 0 hPsi_site_5613 iPseU_CNN:0.91582179069519;iRNA_PseU:0 5614 chr19 57036898 57036898 1 + G A UCEC 57036898 - 57036878 57036918 41 TTTTCCACATTCTTTACATTCATAGGGTTTTTCACCAGTAT TTTTCCACATTCTTTACATTTATAGGGTTTTTCACCAGTAT Direct Gain 0 0.949024139314196 0 0.999967813491821 prediction 0.898048278628392 Functional Gain - ZNF471 ENSG00000196263 CDS Human protein_coding chr19:57036898 chr19:57036898 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106654 0 0 0 0 0 exosome 0 0.438710308814689 0.999935626983642 0 hPsi_site_5614 iPseU_CNN:0.999935626983642;iRNA_PseU:0 5615 chr11 1997260 1997260 1 + G A rs543017102 1997260 - 1997240 1997280 41 CTCAGACCCCGTGGGGAGGACATGCTCAGACCCCGTGGGGA CTCAGACCCCGTGGGGAGGATATGCTCAGACCCCGTGGGGA Direct Gain 0 0.949023598265463 0 0.999061465263367 prediction 0.898047196530927 Functional Gain - MRPL23;MRPL23-AS1 ENSG00000214026 intronic Human protein_coding chr11:1997260 chr11:1997260 . . 0 21 hPsi_associated_SNPs_106655 0 0 0 0 0 unknown 0 0.438718633351165 0.998122930526734 0 hPsi_site_5615 iPseU_CNN:0.998122930526734;iRNA_PseU:0 5616 chr17 33953659 33953659 1 + C A ESCA 33953659 - 33953639 33953679 41 GTTGGCATGGGATAGCCGGGGAGTTACCCGCTCACAGATGC GTTGGCATGGGATAGCCGGGTAGTTACCCGCTCACAGATGC Direct Gain 0 0.949022869957527 0 0.311593592166901 prediction 0.898045739915053 Functional Gain - AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33953659 chr17:33953659 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_106656 0 0 0 0 0 Cytosol 0 0.438718086965299 0 0 hPsi_site_5616 iPseU_CNN:0;iRNA_PseU:0 5617 chr14 52735319 52735319 1 + C T SKCM 52735319 + 52735299 52735339 41 AGCCCCTGGAGGAGCTGGATCACCTCCTGCTGCTGGCGCTG AGCCCCTGGAGGAGCTGGATTACCTCCTGCTGCTGGCGCTG Direct Gain 0 0.94902162873619 0 0.99997466802597 prediction 0.898043257472381 Functional Gain - PTGDR ENSG00000168229 CDS Human protein_coding chr14:52735319 chr14:52735319 nonsynonymous SNV 0.833 3 21 hPsi_associated_SNPs_106657 0 0 0 0 1 exosome 0 0.438718191323649 0.99994933605194 0 hPsi_site_5617 iPseU_CNN:0.99994933605194;iRNA_PseU:0 5618 chrX 151903801 151903801 1 + A T rs72616407 151903801 + 151903781 151903821 41 GCGGGAGCTCCCACGATCGTATTGACCTCTGGAAGAAGACA GCGGGAGCTCCCACGATCGTTTTGACCTCTGGAAGAAGACA Direct Gain 0 0.949017392228216 0 0.990235507488251 prediction 0.898034784456432 Functional Gain - CSAG1 ENSG00000198930 UTR5 Human protein_coding chrX:151903801 chrX:151903801 . . 0 21 hPsi_associated_SNPs_106658 0 0 0 0 1 Ribosome 0 0.438717114658274 0.980471014976502 0 hPsi_site_5618 iPseU_CNN:0.980471014976502;iRNA_PseU:0 5619 chr11 58972187 58972187 1 + C T BLCA 58972187 + 58972167 58972207 41 GTGGCCTGGGATCGCCGCCTCATTTTTGCCATTGGCACCTC GTGGCCTGGGATCGCCGCCTTATTTTTGCCATTGGCACCTC Direct Gain 0 0.949014909276441 0 0.999455094337463 prediction 0.898029818552882 Functional Gain - DTX4 ENSG00000110042 CDS Human protein_coding chr11:58972187 chr11:58972187 synonymous SNV . 0 21 hPsi_associated_SNPs_106659 0 0 0 0 1 Cytosol 0 0.438718592994242 0.998910188674926 0 hPsi_site_5619 iPseU_CNN:0.998910188674926;iRNA_PseU:0 5620 chr22 23055691 23055691 1 + G A rs12160583 23055691 - 23055671 23055711 41 ACTTCCTCATCTGCCTGTGTCACCGTGGGATGATCACTACT ACTTCCTCATCTGCCTGTGTTACCGTGGGATGATCACTACT Direct Gain 0 0.949012138171896 0 0.955201745033264 prediction 0.898024276343791 Functional Gain - GGTLC2;MIR650 ENSG00000211662 downstream Human IG_V_gene chr22:23055691 chr22:23055691 . . 0 21 hPsi_associated_SNPs_106660 0 0 0 0 0 unknown 0 0.438724668740141 0.910403490066528 0 hPsi_site_5620 iPseU_CNN:0.910403490066528;iRNA_PseU:0 5621 chr15 101188666 101188666 1 + G T LUSC 101188666 + 101188646 101188686 41 ACACAAATTTGATGATATCTGATATGCCAGAACTGTGAGCA ACACAAATTTGATGATATCTTATATGCCAGAACTGTGAGCA Direct Gain 0 0.949000176326305 0 0.999630987644196 prediction 0.89800035265261 Functional Gain - ASB7 ENSG00000183475 CDS Human protein_coding chr15:101188666 chr15:101188666 stoploss 0.990 0 21 hPsi_associated_SNPs_106661 0 0 1 0 0 Ribosome 0 0.435643426982052 0.999261975288392 0 hPsi_site_5621 iPseU_CNN:0.999261975288392;iRNA_PseU:0 5622 chr5 34863115 34863115 1 + C T LUSC 34863115 + 34863095 34863135 41 GAAATCCTGGAAGCTCTGGTCAAGCTGTACTACACTCTGGG GAAATCCTGGAAGCTCTGGTTAAGCTGTACTACACTCTGGG Direct Gain 0 0.948996484320516 0 0.378364443778992 prediction 0.897992968641031 Functional Gain - TTC23L ENSG00000205838 CDS Human protein_coding chr5:34863115 chr5:34863115 synonymous SNV . 0 21 hPsi_associated_SNPs_106662 0 0 0 0 0 chromatin 0 0.438718851106308 0 0 hPsi_site_5622 iPseU_CNN:0;iRNA_PseU:0 5623 chr22 50584191 50584191 1 + T A OV 50584191 - 50584171 50584211 41 AGCTGCTGCATGTGGTGATGATTATCCGGAAGCGTGAGGCT AGCTGCTGCATGTGGTGATGTTTATCCGGAAGCGTGAGGCT Direct Gain 0 0.948991978236098 0 0.0747497379779816 prediction 0.897983956472195 Functional Gain - MOV10L1 ENSG00000073146 CDS Human protein_coding chr22:50584191 chr22:50584191 nonsynonymous SNV 0.004 3 21 hPsi_associated_SNPs_106663 0 0 0 0 0 exosome 0 0.438718595941252 0 0 hPsi_site_5623 iPseU_CNN:0;iRNA_PseU:0 5624 chr1 15809840 15809840 1 + C T COAD 15809840 + 15809820 15809860 41 GCCTGCCTCCCTCCTGCCGGCACCATTCTACCCAACAACTA GCCTGCCTCCCTCCTGCCGGTACCATTCTACCCAACAACTA Direct Gain 0 0.948987954593937 0 0.979854345321655 prediction 0.897975909187875 Functional Gain - CELA2B ENSG00000215704 CDS Human protein_coding chr1:15809840 chr1:15809840 synonymous SNV . 0 21 hPsi_associated_SNPs_106664 0 0 0 0 1 unknown 0 0.438719791310196 0.95970869064331 0 hPsi_site_5624 iPseU_CNN:0.95970869064331;iRNA_PseU:0 5625 chr12 66725230 66725230 1 + C T LUSC 66725230 + 66725210 66725250 41 GCATCTCCACTCCCTGTAGTCACAGACCACGCCATGACAAA GCATCTCCACTCCCTGTAGTTACAGACCACGCCATGACAAA Direct Gain 0 0.948986968596087 0 0.997375130653381 prediction 0.897973937192175 Functional Gain - HELB ENSG00000127311 CDS Human protein_coding chr12:66725230 chr12:66725230 synonymous SNV . 0 21 hPsi_associated_SNPs_106665 0 0 1 0 0 nucleus 0 0.438664105076517 0.994750261306762 0 hPsi_site_5625 iPseU_CNN:0.994750261306762;iRNA_PseU:0 5626 chr7 100386933 100386933 1 + G A LUSC 100386933 - 100386913 100386953 41 ACCAAAGCTGACGACCAGCTCAAAGTCGGTGACCAGGTAGA ACCAAAGCTGACGACCAGCTTAAAGTCGGTGACCAGGTAGA Direct Gain 0 0.948984274911634 0 0.999743103981018 prediction 0.897968549823269 Functional Gain - ZAN ENSG00000146839 CDS Human protein_coding chr7:100386933 chr7:100386933 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_106666 0 0 0 0 0 cytosol 0 0.438718433525216 0.999486207962036 0 hPsi_site_5626 iPseU_CNN:0.999486207962036;iRNA_PseU:0 5627 chr1 232943052 232943052 1 + G A SKCM 232943052 - 232943032 232943072 41 ATAATGGAATTTGCAGGACTCACAACTTCTTCCAATGAAAC ATAATGGAATTTGCAGGACTTACAACTTCTTCCAATGAAAC Direct Gain 0 0.948983965377019 0 0.732927203178406 prediction 0.897967930754038 Functional Gain - MAP10 ENSG00000212916 CDS Human protein_coding chr1:232943052 chr1:232943052 synonymous SNV . 0 21 hPsi_associated_SNPs_106667 0 0 0 0 0 exosome 0 0.438718678170558 0.465854406356812 0 hPsi_site_5627 iPseU_CNN:0.465854406356812;iRNA_PseU:0 5628 chr4 153897040 153897040 1 + C A LIHC 153897040 - 153897020 153897060 41 CGGGAGACGCCTCTTTCAGGGAGCCTCTCTTTGGTGCTACA CGGGAGACGCCTCTTTCAGGTAGCCTCTCTTTGGTGCTACA Direct Gain 0 0.948983131528875 0 0.956066966056824 prediction 0.89796626305775 Functional Gain - FHDC1 ENSG00000137460 CDS Human protein_coding chr4:153897040 chr4:153897040 nonsynonymous SNV 0.007 2 21 hPsi_associated_SNPs_106668 0 0 0 0 0 Nucleus 0 0.438718592982246 0.912133932113648 0 hPsi_site_5628 iPseU_CNN:0.912133932113648;iRNA_PseU:0 5629 chr19 22847741 22847741 1 + G A LUAD 22847741 - 22847721 22847761 41 AAAAGCTTTGCCACATTCTTCACATTTGTAGGGTTTCTCTC AAAAGCTTTGCCACATTCTTTACATTTGTAGGGTTTCTCTC Direct Gain 0 0.948981579161087 0 0.999494254589081 prediction 0.897963158322174 Functional Gain - ZNF492 ENSG00000229676 CDS Human protein_coding chr19:22847741 chr19:22847741 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106669 0 0 0 0 0 exosome 0 0.438457680540087 0.998988509178162 0 hPsi_site_5629 iPseU_CNN:0.998988509178162;iRNA_PseU:0 5630 chr13 39263874 39263874 1 + G T LUSC 39263874 + 39263854 39263894 41 AGAACTGGGCGTGGCTACTCGAGTGGCCCAGTTCCAGTTCC AGAACTGGGCGTGGCTACTCTAGTGGCCCAGTTCCAGTTCC Direct Gain 0 0.94897027190823 0 0.474886894226074 prediction 0.89794054381646 Functional Gain - FREM2 ENSG00000150893 CDS Human protein_coding chr13:39263874 chr13:39263874 nonsynonymous SNV 0.977 2 21 hPsi_associated_SNPs_106670 0 0 0 0 0 exosome 0 0.438718592995102 0 0 hPsi_site_5630 iPseU_CNN:0;iRNA_PseU:0 5631 chrX 34962377 34962377 1 + G A LUSC 34962377 - 34962357 34962397 41 AAACAGACTGCTGATGGATTCTTCATTAACTCCTAGGTCTC AAACAGACTGCTGATGGATTTTTCATTAACTCCTAGGTCTC Direct Gain 0 0.948964034420985 0 0.994299054145813 prediction 0.897928068841969 Functional Gain - FAM47B ENSG00000189132 CDS Human protein_coding chrX:34962377 chrX:34962377 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106671 0 0 0 0 0 unknown 0 0.438705340608257 0.988598108291626 0 hPsi_site_5631 iPseU_CNN:0.988598108291626;iRNA_PseU:0 5632 chr11 60777201 60777201 1 + G A BLCA 60777201 - 60777181 60777221 41 TGGGGCAGCCCCTTGGGCCTCTCAACCGCAGTTCCACAGCC TGGGGCAGCCCCTTGGGCCTTTCAACCGCAGTTCCACAGCC Direct Gain 0 0.948963748687584 0 0.90724778175354 prediction 0.897927497375169 Functional Gain - CD6 ENSG00000013725 CDS Human protein_coding chr11:60777201 chr11:60777201 synonymous SNV . 0 21 hPsi_associated_SNPs_106672 0 0 0 0 0 exosome 0 0.438718592995102 0.81449556350708 0 hPsi_site_5632 iPseU_CNN:0.81449556350708;iRNA_PseU:0 5633 chr3 89498454 89498454 1 + G T LGG 89498454 + 89498434 89498474 41 GTCAGCCAGCGATGTATGGAGTTATGGGATTGTTCTCTGGG GTCAGCCAGCGATGTATGGATTTATGGGATTGTTCTCTGGG Direct Gain 0 0.948961105271915 0 0.993174433708191 prediction 0.89792221054383 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89498454 chr3:89498454 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_106673 0 0 1 0 2 Ribosome 0 0.438692901181524 0.986348867416382 0 hPsi_site_5633 iPseU_CNN:0.986348867416382;iRNA_PseU:0 5634 chr1 178427504 178427504 1 + C T SKCM 178427504 + 178427484 178427524 41 AGGTGCCCGAGCCAAAGCCCCACCATCCCTGCCACACAGTG AGGTGCCCGAGCCAAAGCCCTACCATCCCTGCCACACAGTG Direct Gain 0 0.948955784925611 0 0.999993681907654 prediction 0.897911569851222 Functional Gain - RASAL2 ENSG00000075391 CDS Human protein_coding chr1:178427504 chr1:178427504 nonsynonymous SNV 0.994 2 21 hPsi_associated_SNPs_106674 0 0 0 0 0 Nucleus 0 0.40990746865005 0.999987363815308 0 hPsi_site_5634 iPseU_CNN:0.999987363815308;iRNA_PseU:0 5635 chr6 45399659 45399659 1 + T A ESCA 45399659 - 45399639 45399679 41 AGCTCAGCAGAATAATTTTCATCGTTACCCGCCATGACAGT AGCTCAGCAGAATAATTTTCTTCGTTACCCGCCATGACAGT Direct Gain 0 0.948955746167366 0 0.964872241020203 prediction 0.897911492334732 Functional Gain - RUNX2 ENSG00000124813 CDS Human protein_coding chr6:45399659 chr6:45399659 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_106675 0 0 0 0 0 Cytosol 0 0.438718591742985 0.929744482040406 0 hPsi_site_5635 iPseU_CNN:0.929744482040406;iRNA_PseU:0 5636 chr2 33707791 33707791 1 + C T rs141515583 33707791 + 33707771 33707811 41 TCATTGTATGACAGCATCATCAGAATGTTGCCAAGATCATA TCATTGTATGACAGCATCATTAGAATGTTGCCAAGATCATA Direct Gain 0 0.94894501524371 0 0.13730975985527 prediction 0.897890030487421 Functional Gain - RASGRP3 ENSG00000152689 intronic Human protein_coding chr2:33707791 chr2:33707791 . . 0 21 hPsi_associated_SNPs_106676 0 0 0 2 0 cytosol 0 0.438760750285686 0 0 hPsi_site_5636 iPseU_CNN:0;iRNA_PseU:0 5637 chr12 31135580 31135580 1 + G A STAD 31135580 - 31135560 31135600 41 TGGGCCCGCTGGCCGCAGCGCACCACCACTGTCTTGCAGCA TGGGCCCGCTGGCCGCAGCGTACCACCACTGTCTTGCAGCA Direct Gain 0 0.948940253270917 0 0.986873507499695 prediction 0.897880506541835 Functional Gain - TSPAN11 ENSG00000110900 CDS Human protein_coding chr12:31135580 chr12:31135580 synonymous SNV . 0 21 hPsi_associated_SNPs_106677 0 0 0 0 0 Cytosol 0 0.438648612044718 0.97374701499939 0 hPsi_site_5637 iPseU_CNN:0.97374701499939;iRNA_PseU:0 5638 chr21 38524296 38524296 1 + G T COAD 38524296 + 38524276 38524316 41 GAATGGAGGAGGACTTAAGAGAAAGTAATCCACCCAAAAAT GAATGGAGGAGGACTTAAGATAAAGTAATCCACCCAAAAAT Direct Gain 0 0.948937985824194 0 0.885103404521942 prediction 0.897875971648388 Functional Gain - TTC3 ENSG00000182670 CDS Human protein_coding chr21:38524296 chr21:38524296 stopgain 1.000 0 21 hPsi_associated_SNPs_106678 0 0 1 0 1 Cytosol 0 0.438722498148171 0.770206809043884 0 hPsi_site_5638 iPseU_CNN:0.770206809043884;iRNA_PseU:0 5639 chr2 187495554 187495554 1 + G A ESCA 187495554 - 187495534 187495574 41 CAATGCTGAATCCTCCTTGACAAAATCCCTGTCCATCAGCA CAATGCTGAATCCTCCTTGATAAAATCCCTGTCCATCAGCA Direct Gain 0 0.948936784441558 0 0.999898970127106 prediction 0.897873568883116 Functional Gain - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187495554 chr2:187495554 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106679 0 0 0 0 0 Endoplasmic reticulum 0 0.438718436358745 0.999797940254212 0 hPsi_site_5639 iPseU_CNN:0.999797940254212;iRNA_PseU:0 5640 chr11 22747949 22747949 1 + G A LUSC 22747949 - 22747929 22747969 41 CGATTCAAATAGACACGTTTCATCCACCCCTAAATCTCGGC CGATTCAAATAGACACGTTTTATCCACCCCTAAATCTCGGC Direct Gain 0 0.948935212522273 0 0.955119907855988 prediction 0.897870425044547 Functional Gain - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22747949 chr11:22747949 nonsynonymous SNV 0.987 1 21 hPsi_associated_SNPs_106680 0 0 0 0 0 Endoplasmic reticulum 0 0.438780599824354 0.910239815711976 0 hPsi_site_5640 iPseU_CNN:0.910239815711976;iRNA_PseU:0 5641 chr2 105708997 105708997 1 + G A rs147161518 105708997 - 105708977 105709017 41 GCTAAAGGCCATTCCTTGCTCATCATACTGTACAGGTTCAA GCTAAAGGCCATTCCTTGCTTATCATACTGTACAGGTTCAA Direct Gain 0 0.94893286565022 0 0.995655179023743 prediction 0.89786573130044 Functional Gain - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105708997 chr2:105708997 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106681 0 0 0 0 0 Ribosome 0 0.438719871614429 0.991310358047486 0 hPsi_site_5641 iPseU_CNN:0.991310358047486;iRNA_PseU:0 5642 chrX 129147106 129147106 1 + G T KIRC 129147106 + 129147086 129147126 41 TGCCCCTGAGCAGCCCAGGAGACGGGCTCAAGCTTCCCGCA TGCCCCTGAGCAGCCCAGGATACGGGCTCAAGCTTCCCGCA Direct Gain 0 0.948930129591972 0 0.999994993209839 prediction 0.897860259183944 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147106 chrX:129147106 nonsynonymous SNV 0.977 3 21 hPsi_associated_SNPs_106682 0 0 1 0 0 Cytosol 0 0.43871699299288 0.999989986419678 0 hPsi_site_5642 iPseU_CNN:0.999989986419678;iRNA_PseU:0 5643 chr22 25320541 25320541 1 + G A rs137873193 25320541 - 25320521 25320561 41 GAAGAGGAGACCATTCCGGGCACCAGCAAACAAAGATGGCT GAAGAGGAGACCATTCCGGGTACCAGCAAACAAAGATGGCT Direct Gain 0 0.94892989177238 0 0.757816255092621 prediction 0.897859783544759 Functional Gain - SGSM1 ENSG00000167037 UTR3 Human protein_coding chr22:25320541 chr22:25320541 . . 0 21 hPsi_associated_SNPs_106683 0 0 0 0 0 exosome 0 0.438718855477707 0.515632510185242 0 hPsi_site_5643 iPseU_CNN:0.515632510185242;iRNA_PseU:0 5644 chr17 78765289 78765289 1 + C T SKCM 78765289 + 78765269 78765309 41 GTCAGTCTGGTGCCTGGCGTCACACTGGATTTGATAGAAAA GTCAGTCTGGTGCCTGGCGTTACACTGGATTTGATAGAAAA Direct Gain 0 0.948929303673556 0 0.996297538280487 prediction 0.897858607347113 Functional Gain - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78765289 chr17:78765289 synonymous SNV . 0 21 hPsi_associated_SNPs_106684 0 0 1 0 2 Nucleus 0 0.438722909545003 0.992595076560974 0 hPsi_site_5644 iPseU_CNN:0.992595076560974;iRNA_PseU:0 5645 chr18 77477886 77477886 1 + C A UCEC 77477886 - 77477866 77477906 41 GGGGCCAGGCTGGGCCTTGGGAAGAACCGGCATCGGGTGGA GGGGCCAGGCTGGGCCTTGGTAAGAACCGGCATCGGGTGGA Direct Gain 0 0.948922758085223 0 0.996743679046631 prediction 0.897845516170447 Functional Gain - CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77477886 chr18:77477886 nonsynonymous SNV 0.026 1 21 hPsi_associated_SNPs_106685 0 0 0 0 0 chromatin 0 0.438943489550528 0.993487358093262 0 hPsi_site_5645 iPseU_CNN:0.993487358093262;iRNA_PseU:0 5646 chr14 22237266 22237266 1 + C T SKCM 22237266 + 22237246 22237286 41 CCCTTAAACAGAGTTTGTTTCATATCACAGCCTCCCAGCCT CCCTTAAACAGAGTTTGTTTTATATCACAGCCTCCCAGCCT Direct Gain 0 0.94891986823149 0 0.992162883281708 prediction 0.89783973646298 Functional Gain - OR4E1;LINC02332 ENSG00000211780 CDS Human TR_V_gene chr14:22237266 chr14:22237266 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106686 0 0 0 0 0 unknown 0 0.438718599536973 0.984325766563416 0 hPsi_site_5646 iPseU_CNN:0.984325766563416;iRNA_PseU:0 5647 chr2 187521035 187521035 1 + G T BRCA 187521035 + 187521015 187521055 41 GGAGCAATTCGACGAGCACTGTTTCTCTACAGCAGGTCCCC GGAGCAATTCGACGAGCACTTTTTCTCTACAGCAGGTCCCC Direct Gain 0 0.9489165387246 0 0.99981564283371 prediction 0.897833077449201 Functional Gain - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187521035 chr2:187521035 synonymous SNV . 0 21 hPsi_associated_SNPs_106687 0 0 1 0 2 Endoplasmic reticulum 0 0.438718592994804 0.99963128566742 0 hPsi_site_5647 iPseU_CNN:0.99963128566742;iRNA_PseU:0 5648 chr12 111066746 111066746 1 + C T SKCM 111066746 + 111066726 111066766 41 GAGCCTGAACTTGATTGATTCTTTTCATCCCATCACAAATA GAGCCTGAACTTGATTGATTTTTTTCATCCCATCACAAATA Direct Gain 0 0.948907448995087 0 0.822351157665253 prediction 0.897814897990175 Functional Gain - TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111066746 chr12:111066746 nonsynonymous SNV 0.000 2 21 hPsi_associated_SNPs_106688 0 0 1 0 0 chromatin 0 0.438715841520636 0.644702315330506 0 hPsi_site_5648 iPseU_CNN:0.644702315330506;iRNA_PseU:0 5649 chr11 20648376 20648376 1 + C T SKCM 20648376 + 20648356 20648396 41 ACACCCAAGTGGGAGAAACTCACGGATGCCACGGTGGGCTT ACACCCAAGTGGGAGAAACTTACGGATGCCACGGTGGGCTT Direct Gain 0 0.948906859878776 0 0.475642263889313 prediction 0.897813719757551 Functional Gain - SLC6A5 ENSG00000165970 CDS Human protein_coding chr11:20648376 chr11:20648376 synonymous SNV . 0 21 hPsi_associated_SNPs_106689 0 0 0 0 1 unknown 0 0.438718281641172 0 0 hPsi_site_5649 iPseU_CNN:0;iRNA_PseU:0 5650 chr3 43389698 43389698 1 + C T KIRC 43389698 + 43389678 43389718 41 CTCGTTGAGAGCCTCAAACTCATGAGCCTCTGCCTCGGCTC CTCGTTGAGAGCCTCAAACTTATGAGCCTCTGCCTCGGCTC Direct Gain 0 0.948892842707248 0 0.960574746131897 prediction 0.897785685414497 Functional Gain - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389698 chr3:43389698 synonymous SNV . 0 21 hPsi_associated_SNPs_106690 0 0 1 0 0 Cytosol 0 0.438723425898243 0.921149492263794 0 hPsi_site_5650 iPseU_CNN:0.921149492263794;iRNA_PseU:0 5651 chr14 80130168 80130168 1 + C A UCEC 80130168 - 80130148 80130188 41 GTTCTCTCCTCTTTGATGGAGATGTCAACTGTGCCAATGTT GTTCTCTCCTCTTTGATGGATATGTCAACTGTGCCAATGTT Direct Gain 0 0.948890091510476 0 0.852435350418091 prediction 0.897780183020952 Functional Gain - NRXN3 ENSG00000021645 CDS Human protein_coding chr14:80130168 chr14:80130168 synonymous SNV . 0 21 hPsi_associated_SNPs_106691 0 0 0 0 0 chromatin 0 0.44108766628853 0.704870700836182 0 hPsi_site_5651 iPseU_CNN:0.704870700836182;iRNA_PseU:0 5652 chr11 76831829 76831829 1 + C T BLCA 76831829 + 76831809 76831849 41 CAGCTCCATCTACATCAACTCACGCAGCGTCTTCCTGCGCA CAGCTCCATCTACATCAACTTACGCAGCGTCTTCCTGCGCA Direct Gain 0 0.948889226999743 0 0.99999475479126 prediction 0.897778453999486 Functional Gain - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76831829 chr11:76831829 nonsynonymous SNV 0.796 4 21 hPsi_associated_SNPs_106692 0 0 0 0 1 Endoplasmic reticulum 0 0.438896420718658 0.99998950958252 0 hPsi_site_5652 iPseU_CNN:0.99998950958252;iRNA_PseU:0 5653 chr10 17275823 17275823 1 + G T LUAD 17275823 + 17275803 17275843 41 AGCATGTCCAAATCGATGTGGATGTTTCCAAGCCTGACCTC AGCATGTCCAAATCGATGTGTATGTTTCCAAGCCTGACCTC Direct Gain 0 0.948888949682136 0 0.996970295906067 prediction 0.897777899364272 Functional Gain - VIM ENSG00000026025 CDS Human protein_coding chr10:17275823 chr10:17275823 nonsynonymous SNV 0.960 5 21 hPsi_associated_SNPs_106693 0 0 1 1 1 Ribosome 0 0.425582267564896 0.993940591812134 0 hPsi_site_5653 iPseU_CNN:0.993940591812134;iRNA_PseU:0 5654 chr16 84883108 84883108 1 + C T UCEC 84883108 + 84883088 84883128 41 AGGTGCTCGGGGCCCATGTGCACGCACTACACACAGGTAAC AGGTGCTCGGGGCCCATGTGTACGCACTACACACAGGTAAC Direct Gain 0 0.948872697969872 0 0.999864816665649 prediction 0.897745395939744 Functional Gain - CRISPLD2 ENSG00000103196 CDS Human protein_coding chr16:84883108 chr16:84883108 synonymous SNV . 0 21 hPsi_associated_SNPs_106694 0 0 0 0 1 Nucleus 0 0.438733244549671 0.999729633331298 0 hPsi_site_5654 iPseU_CNN:0.999729633331298;iRNA_PseU:0 5655 chr4 2695442 2695442 1 + C T LUSC 2695442 + 2695422 2695462 41 GCTGTCACCTGCTGCGCTCTCACCTGCCTCCACACCTCACC GCTGTCACCTGCTGCGCTCTTACCTGCCTCCACACCTCACC Direct Gain 0 0.948872067628013 0 0.746087491512299 prediction 0.897744135256026 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2695442 chr4:2695442 nonsynonymous SNV 0.006 1 21 hPsi_associated_SNPs_106695 0 0 1 0 0 Cytosol 0 0.438721166620866 0.492174983024598 0 hPsi_site_5655 iPseU_CNN:0.492174983024598;iRNA_PseU:0 5656 chr17 78069097 78069097 1 + G A rs1982243 78069097 - 78069077 78069117 41 AACTCCATGGCACGGATCATCTTCTCCTGCTGCTTCAGCAG AACTCCATGGCACGGATCATTTTCTCCTGCTGCTTCAGCAG Direct Gain 0 0.9488698910603 0 0.984053134918213 prediction 0.897739782120601 Functional Gain - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78069097 chr17:78069097 synonymous SNV . 0 21 hPsi_associated_SNPs_106696 2 0 0 0 0 exosome 0 0.438718594708001 0.968106269836426 0 hPsi_site_5656 iPseU_CNN:0.968106269836426;iRNA_PseU:0 5657 chrX 65239368 65239368 1 + C T rs7880198 65239368 + 65239348 65239388 41 TTCCAGAGACTTTTGAAAGTCAACTTACACTTTTTCCTTCT TTCCAGAGACTTTTGAAAGTTAACTTACACTTTTTCCTTCT Direct Gain 0 0.948863742642594 0 0.661416351795197 prediction 0.897727485285189 Functional Gain - MIR223 ENSG00000207939 downstream Human other chrX:65239368 chrX:65239368 . . 0 21 hPsi_associated_SNPs_106697 0 0 0 0 0 unknown 0 0.438719901951814 0.322832703590394 0 hPsi_site_5657 iPseU_CNN:0.322832703590394;iRNA_PseU:0 5658 chr6 26413585 26413585 1 + G T LUSC 26413585 + 26413565 26413605 41 ACTGGGAGGTGGAGGTAGGGGACAGGAAAGAGTGGCATATA ACTGGGAGGTGGAGGTAGGGTACAGGAAAGAGTGGCATATA Direct Gain 0 0.948856698913547 0 0.999877154827118 prediction 0.897713397827094 Functional Gain - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26413585 chr6:26413585 nonsynonymous SNV 0.175 3 21 hPsi_associated_SNPs_106698 0 0 0 0 0 Nucleus 0 0.438718589039812 0.999754309654236 0 hPsi_site_5658 iPseU_CNN:0.999754309654236;iRNA_PseU:0 5659 chr21 45825823 45825823 1 + T A COAD 45825823 - 45825803 45825843 41 GGATGAAGTCCAGAGAGAGGATGACGCGCCCGGGGTACAGC GGATGAAGTCCAGAGAGAGGTTGACGCGCCCGGGGTACAGC Direct Gain 0 0.948856618198896 0 0.448191493749619 prediction 0.897713236397793 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45825823 chr21:45825823 nonsynonymous SNV 0.878 3 21 hPsi_associated_SNPs_106699 0 0 0 0 0 Ribosome 0 0.438718557556144 0 0 hPsi_site_5659 iPseU_CNN:0;iRNA_PseU:0 5660 chr20 54824481 54824481 1 + C T LUSC 54824481 + 54824461 54824501 41 GTCATTGTGTGCCTCATCACCATGTTCTTCGCCATGATGCT GTCATTGTGTGCCTCATCACTATGTTCTTCGCCATGATGCT Direct Gain 0 0.94885572598812 0 0.997412979602814 prediction 0.89771145197624 Functional Gain - MC3R ENSG00000124089 CDS Human protein_coding chr20:54824481 chr20:54824481 synonymous SNV . 0 21 hPsi_associated_SNPs_106700 0 0 0 0 0 unknown 0 0.441534924669903 0.994825959205628 0 hPsi_site_5660 iPseU_CNN:0.994825959205628;iRNA_PseU:0 5661 chr19 18958562 18958562 1 + A T rs73526913 18958562 + 18958542 18958582 41 TGATTTTTTAGTTACTGTGGAATACACGATCCTGCCTGCGT TGATTTTTTAGTTACTGTGGTATACACGATCCTGCCTGCGT Direct Gain 0 0.948854889762498 0 0.490617543458939 prediction 0.897709779524997 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18958562 chr19:18958562 synonymous SNV . 0 21 hPsi_associated_SNPs_106701 0 0 1 0 2 Nucleus 0 0.438718338134597 0 0 hPsi_site_5661 iPseU_CNN:0;iRNA_PseU:0 5662 chr1 115537562 115537562 1 + G A LUSC 115537562 - 115537542 115537582 41 ACAGCCCAACGGTCCTCCCGCATTTTTCTTATAGCTCCAAA ACAGCCCAACGGTCCTCCCGTATTTTTCTTATAGCTCCAAA Direct Gain 0 0.948848583787947 0 0.418581068515778 prediction 0.897697167575894 Functional Gain - SYCP1 ENSG00000198765 CDS Human protein_coding chr1:115537562 chr1:115537562 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_106702 0 0 0 0 0 exosome 0 0.438718593001675 0 0 hPsi_site_5662 iPseU_CNN:0;iRNA_PseU:0 5663 chr14 22675976 22675976 1 + C T HNSC 22675976 + 22675956 22675996 41 CAGCAAAGTTCCCTGCATATCACAGCCTCCCAGCCCAGCCA CAGCAAAGTTCCCTGCATATTACAGCCTCCCAGCCCAGCCA Direct Gain 0 0.948839980441983 0 0.983847558498383 prediction 0.897679960883967 Functional Gain - OR4E1;LINC02332 ENSG00000211813 CDS Human TR_V_gene chr14:22675976 chr14:22675976 synonymous SNV . 0 21 hPsi_associated_SNPs_106703 0 0 0 0 0 unknown 0 0.438718592995879 0.967695116996766 0 hPsi_site_5663 iPseU_CNN:0.967695116996766;iRNA_PseU:0 5664 chr19 45977434 45977434 1 + C T rs28381258 45977434 + 45977414 45977454 41 CCAGCCTAGGACGCCAACTTCTCCCACCCCTTGGCCCCTCA CCAGCCTAGGACGCCAACTTTTCCCACCCCTTGGCCCCTCA Direct Gain 0 0.948836064613087 0 0.983640611171722 prediction 0.897672129226175 Functional Gain - FOSB ENSG00000125740 UTR3 Human protein_coding chr19:45977434 chr19:45977434 . . 0 21 hPsi_associated_SNPs_106704 0 0 0 0 0 Cytosol 0 0.438718609107948 0.967281222343444 0 hPsi_site_5664 iPseU_CNN:0.967281222343444;iRNA_PseU:0 5665 chr12 130648636 130648636 1 + C T SKCM 130648636 + 130648616 130648656 41 GGGGACGAGCTCACCGGGGTCTGCTACGTGGGCAGCATGGA GGGGACGAGCTCACCGGGGTTTGCTACGTGGGCAGCATGGA Direct Gain 0 0.948834767288551 0 0.999961614608765 prediction 0.897669534577102 Functional Gain - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130648636 chr12:130648636 synonymous SNV . 0 21 hPsi_associated_SNPs_106705 0 0 0 0 0 exosome 0 0.439320401696122 0.99992322921753 0 hPsi_site_5665 iPseU_CNN:0.99992322921753;iRNA_PseU:0 5666 chr11 108238315 108238315 1 + C A rs142456486 108238315 - 108238295 108238335 41 GAAAGCTCAATCACCCATTTGTTAATCTCCGCAGCTGGGAT GAAAGCTCAATCACCCATTTTTTAATCTCCGCAGCTGGGAT Direct Gain 0 0.948834675798068 0 0.0478880703449249 prediction 0.897669351596136 Functional Gain - ATM ENSG00000149311 UTR3 Human protein_coding chr11:108238315 chr11:108238315 . . 0 21 hPsi_associated_SNPs_106706 0 0 0 0 0 Nucleus 0 0.439308426691879 0 0 hPsi_site_5666 iPseU_CNN:0;iRNA_PseU:0 5667 chr3 113795710 113795710 1 + C A LUSC 113795710 - 113795690 113795730 41 CAGGGTTGTTGGATTTCCTTGAAAACCATCCAGAAGGAAGC CAGGGTTGTTGGATTTCCTTTAAAACCATCCAGAAGGAAGC Direct Gain 0 0.948829958393332 0 0.847131431102753 prediction 0.897659916786663 Functional Gain - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113795710 chr3:113795710 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_106707 0 0 0 0 0 Nucleus 0 0.438718592995102 0.694262862205506 0 hPsi_site_5667 iPseU_CNN:0.694262862205506;iRNA_PseU:0 5668 chr17 80011842 80011842 1 + G A LIHC 80011842 - 80011822 80011862 41 ACGAAGGAGAGGGCCATCTTCAGGGCCTCCACCCGCAGCGT ACGAAGGAGAGGGCCATCTTTAGGGCCTCCACCCGCAGCGT Direct Gain 0 0.948826183453209 0 0.990852355957031 prediction 0.897652366906419 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80011842 chr17:80011842 synonymous SNV . 0 21 hPsi_associated_SNPs_106708 0 0 0 0 0 Cytosol 0 0.438719248739725 0.981704711914062 0 hPsi_site_5668 iPseU_CNN:0.981704711914062;iRNA_PseU:0 5669 chr12 132403110 132403110 1 + G A UCEC 132403110 - 132403090 132403130 41 TGGAGCAGGGAGCTCAGGGGCTGGGGCCTCGCTGCAGGGCC TGGAGCAGGGAGCTCAGGGGTTGGGGCCTCGCTGCAGGGCC Direct Gain 0 0.94882575608517 0 0.642829179763794 prediction 0.89765151217034 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132403110 chr12:132403110 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_106709 0 0 0 0 0 Cytosol 0 0.438718592995102 0.285658359527588 0 hPsi_site_5669 iPseU_CNN:0.285658359527588;iRNA_PseU:0 5670 chr19 45179567 45179567 1 + C T rs78626419 45179567 + 45179547 45179587 41 GAATAAGGAGCTGCCCAGTACACACCTGCCCACCAACGCTG GAATAAGGAGCTGCCCAGTATACACCTGCCCACCAACGCTG Direct Gain 0 0.948817943165049 0 0.999922037124634 prediction 0.897635886330098 Functional Gain - CEACAM19 ENSG00000186567 CDS Human protein_coding chr19:45179567 chr19:45179567 nonsynonymous SNV 0.011 0 21 hPsi_associated_SNPs_106710 0 0 0 0 1 Cytosol 0 0.43871409422616 0.999844074249268 0 hPsi_site_5670 iPseU_CNN:0.999844074249268;iRNA_PseU:0 5671 chr9 99220728 99220728 1 + G A OV 99220728 - 99220708 99220748 41 CTCCGCTCAGCTCTTTCGAGCATCCCCTCCGGCCCACGGCT CTCCGCTCAGCTCTTTCGAGTATCCCCTCCGGCCCACGGCT Direct Gain 0 0.948812523492483 0 0.999815881252289 prediction 0.897625046984967 Functional Gain - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99220728 chr9:99220728 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_106711 0 0 0 0 0 chromatin 0 0.438718574898325 0.999631762504578 0 hPsi_site_5671 iPseU_CNN:0.999631762504578;iRNA_PseU:0 5672 chr14 20389666 20389666 1 + A T LUSC 20389666 + 20389646 20389686 41 TGAAGGCTGCCGTAAGGAAAATTGTGAACCATTACCTGAGG TGAAGGCTGCCGTAAGGAAATTTGTGAACCATTACCTGAGG Direct Gain 0 0.948805980675736 0 0.99782532453537 prediction 0.897611961351471 Functional Gain - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20389666 chr14:20389666 nonsynonymous SNV 0.029 0 21 hPsi_associated_SNPs_106712 0 0 0 0 0 unknown 0 0.438721023778676 0.99565064907074 0 hPsi_site_5672 iPseU_CNN:0.99565064907074;iRNA_PseU:0 5673 chr19 42874353 42874353 1 + G A BLCA 42874353 - 42874333 42874373 41 AAACAGCGGGAGGCACTGCTCACAGTGGCTGCCCTGAGAAC AAACAGCGGGAGGCACTGCTTACAGTGGCTGCCCTGAGAAC Direct Gain 0 0.948802419240911 0 0.999997794628143 prediction 0.897604838481823 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42874353 chr19:42874353 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_106713 0 0 0 0 0 Endoplasmic reticulum 0 0.437838221441626 0.999995589256286 0 hPsi_site_5673 iPseU_CNN:0.999995589256286;iRNA_PseU:0 5674 chr16 2811844 2811844 1 + G T UCEC 2811844 + 2811824 2811864 41 GGCATGCCAGCTCTTCCCCAGAAAGTCCTAAACCTGCTCCA GGCATGCCAGCTCTTCCCCATAAAGTCCTAAACCTGCTCCA Direct Gain 0 0.948795944353578 0 0.964064002037048 prediction 0.897591888707155 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811844 chr16:2811844 stopgain 1.000 1 21 hPsi_associated_SNPs_106714 0 0 1 0 0 Nucleus 0 0.438644488470032 0.928128004074096 0 hPsi_site_5674 iPseU_CNN:0.928128004074096;iRNA_PseU:0 5675 chr11 55433091 55433091 1 + G T LUAD 55433091 + 55433071 55433111 41 AGGAGGGGCTTGGGTGGGGGGATTTATGCACGCAATGATAC AGGAGGGGCTTGGGTGGGGGTATTTATGCACGCAATGATAC Direct Gain 0 0.948795906883384 0 0.000429064035415649 prediction 0.897591813766768 Functional Gain - OR4C6 ENSG00000181903 CDS Human protein_coding chr11:55433091 chr11:55433091 nonsynonymous SNV 0.555 1 21 hPsi_associated_SNPs_106715 0 0 0 0 0 unknown 0 0.43872090683319 0 0 hPsi_site_5675 iPseU_CNN:0;iRNA_PseU:0 5676 chr18 42532839 42532839 1 + C T SKCM 42532839 + 42532819 42532859 41 GGTCTTTTTGCAGGCAAAGCCACAGGCTTCTCCAGCCACAT GGTCTTTTTGCAGGCAAAGCTACAGGCTTCTCCAGCCACAT Direct Gain 0 0.948791962255724 0 0.91823136806488 prediction 0.897583924511448 Functional Gain - SETBP1 ENSG00000152217 CDS Human protein_coding chr18:42532839 chr18:42532839 synonymous SNV . 0 21 hPsi_associated_SNPs_106716 0 0 0 0 0 nucleus 0 0.438718451767564 0.83646273612976 0 hPsi_site_5676 iPseU_CNN:0.83646273612976;iRNA_PseU:0 5677 chrX 75648877 75648877 1 + G A UCEC 75648877 - 75648857 75648897 41 GGGTGGGCACCACGGAGGTGCTTGGTCCCTCATAGGCTGTG GGGTGGGCACCACGGAGGTGTTTGGTCCCTCATAGGCTGTG Direct Gain 0 0.948791385379328 0 0.982397139072418 prediction 0.897582770758655 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75648877 chrX:75648877 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_106717 0 0 0 0 0 membrane 0 0.438719180142191 0.964794278144836 0 hPsi_site_5677 iPseU_CNN:0.964794278144836;iRNA_PseU:0 5678 chr1 151011435 151011435 1 + G T UCEC 151011435 + 151011415 151011455 41 GATGGCAGTTCTGACCTGGAGATAGACGAATTGGAGACACC GATGGCAGTTCTGACCTGGATATAGACGAATTGGAGACACC Direct Gain 0 0.948784954072212 0 0.983569025993347 prediction 0.897569908144425 Functional Gain - BNIPL ENSG00000163141 CDS Human protein_coding chr1:151011435 chr1:151011435 nonsynonymous SNV 0.986 0 21 hPsi_associated_SNPs_106718 0 0 0 1 1 Nucleus 0 0.438702487442507 0.967138051986694 0 hPsi_site_5678 iPseU_CNN:0.967138051986694;iRNA_PseU:0 5679 chr10 91066539 91066539 1 + T A PRAD 91066539 - 91066519 91066559 41 GTAGGCATTGTTTGGTATGTATTCTAAAGCCTTTTTAAGCA GTAGGCATTGTTTGGTATGTTTTCTAAAGCCTTTTTAAGCA Direct Gain 0 0.948772205893752 0 0.995300531387329 prediction 0.897544411787504 Functional Gain - IFIT2 ENSG00000119922 CDS Human protein_coding chr10:91066539 chr10:91066539 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106719 0 0 0 0 0 exosome 0 0.43913003751609 0.990601062774658 0 hPsi_site_5679 iPseU_CNN:0.990601062774658;iRNA_PseU:0 5680 chr5 145719498 145719498 1 + C T SKCM 145719498 + 145719478 145719518 41 ACCCGCACACCGTGGCCCCTCATAGCGCCATGCCTGCATGC ACCCGCACACCGTGGCCCCTTATAGCGCCATGCCTGCATGC Direct Gain 0 0.94877133704121 0 0.997006356716156 prediction 0.897542674082419 Functional Gain - POU4F3 ENSG00000091010 CDS Human protein_coding chr5:145719498 chr5:145719498 nonsynonymous SNV 0.962 1 21 hPsi_associated_SNPs_106720 0 0 0 0 0 exosome 0 0.441839303925374 0.994012713432312 0 hPsi_site_5680 iPseU_CNN:0.994012713432312;iRNA_PseU:0 5681 chr6 84233404 84233404 1 + C A UCEC 84233404 - 84233384 84233424 41 AAAGACAGTCTCATAGGAAAGATAATCCTCCAATTCAGAAA AAAGACAGTCTCATAGGAAATATAATCCTCCAATTCAGAAA Direct Gain 0 0.948763952308203 0 0.000602543354034424 prediction 0.897527904616406 Functional Gain - PRSS35 ENSG00000146250 CDS Human protein_coding chr6:84233404 chr6:84233404 nonsynonymous SNV 0.084 2 21 hPsi_associated_SNPs_106721 0 0 0 0 0 exosome 0 0.438432554026496 0 0 hPsi_site_5681 iPseU_CNN:0;iRNA_PseU:0 5682 chr4 110865188 110865188 1 + G A SKCM 110865188 - 110865168 110865208 41 AATGTGGACAGAACCTCCATCATAATCACAGGAGCAAATAA AATGTGGACAGAACCTCCATTATAATCACAGGAGCAAATAA Direct Gain 0 0.948754903977636 0 0.845640301704407 prediction 0.897509807955271 Functional Gain - EGF ENSG00000138798 CDS Human protein_coding chr4:110865188 chr4:110865188 nonsynonymous SNV 0.949 1 21 hPsi_associated_SNPs_106722 0 0 0 0 0 membrane 0 0.438895030694509 0.691280603408814 0 hPsi_site_5682 iPseU_CNN:0.691280603408814;iRNA_PseU:0 5683 chr19 42583295 42583295 1 + G A STAD 42583295 - 42583275 42583315 41 GCCTTTCGGTATGAGTGCTCCACAGCCACTCGGGCCTGGCC GCCTTTCGGTATGAGTGCTCTACAGCCACTCGGGCCTGGCC Direct Gain 0 0.948754464235929 0 0.351776599884033 prediction 0.897508928471858 Functional Gain - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42583295 chr19:42583295 synonymous SNV . 0 21 hPsi_associated_SNPs_106723 0 0 0 0 0 Cytosol 0 0.438636693903411 0 0 hPsi_site_5683 iPseU_CNN:0;iRNA_PseU:0 5684 chr20 32255647 32255647 1 + G A UCEC 32255647 - 32255627 32255667 41 GGAAGCGCTCACTGCTGAGGCAGACGCAGCACCCGTTACCC GGAAGCGCTCACTGCTGAGGTAGACGCAGCACCCGTTACCC Direct Gain 0 0.948750840934957 0 0.999936282634735 prediction 0.897501681869914 Functional Gain - ACTL10 ENSG00000182584 CDS Human protein_coding chr20:32255647 chr20:32255647 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106724 0 0 0 0 0 exosome 0 0.438723147945552 0.99987256526947 0 hPsi_site_5684 iPseU_CNN:0.99987256526947;iRNA_PseU:0 5685 chr19 47506821 47506821 1 + C A rs139116656 47506821 - 47506801 47506841 41 GCAGAGTAAATGTGTGCCGTGACACCCAGTATGCGACACAA GCAGAGTAAATGTGTGCCGTTACACCCAGTATGCGACACAA Direct Gain 0 0.948743983742801 0 0.999700784683228 prediction 0.897487967485602 Functional Gain - ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506821 chr19:47506821 . . 0 21 hPsi_associated_SNPs_106725 0 0 0 0 0 Ribosome 0 0.438633684606341 0.999401569366456 0 hPsi_site_5685 iPseU_CNN:0.999401569366456;iRNA_PseU:0 5686 chr7 142499042 142499042 1 + G A CESC 142499042 - 142499022 142499062 41 CCTATCCTGGGTCCACTCGTCATTCTCCGAGAGCCCGTAGA CCTATCCTGGGTCCACTCGTTATTCTCCGAGAGCCCGTAGA Direct Gain 0 0.948743694420784 0 0.958548545837402 prediction 0.897487388841568 Functional Gain - PRSS3P2;EPHB6 ENSG00000211772 CDS Human TR_C_gene chr7:142499042 chr7:142499042 unknown . 0 21 hPsi_associated_SNPs_106726 0 0 0 0 0 unknown 0 0.438718650415978 0.917097091674804 0 hPsi_site_5686 iPseU_CNN:0.917097091674804;iRNA_PseU:0 5687 chr16 3077614 3077614 1 + G A UCEC 3077614 - 3077594 3077634 41 GTAACCCAGGTTGGTGAAGACATCCACCCGGCAGCTGTTGC GTAACCCAGGTTGGTGAAGATATCCACCCGGCAGCTGTTGC Direct Gain 0 0.948743525396978 0 0.949201583862305 prediction 0.897487050793955 Functional Gain - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3077614 chr16:3077614 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_106727 0 0 0 0 0 Ribosome 0 0.438718592995101 0.89840316772461 0 hPsi_site_5687 iPseU_CNN:0.89840316772461;iRNA_PseU:0 5688 chr13 42742851 42742851 1 + G A COAD 42742851 - 42742831 42742871 41 GCCAAGAACTCGGGCAAGGTCATTTCCTGTACCCAAAGGCA GCCAAGAACTCGGGCAAGGTTATTTCCTGTACCCAAAGGCA Direct Gain 0 0.948737548252383 0 0.999894738197327 prediction 0.897475096504766 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42742851 chr13:42742851 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106728 0 0 0 0 0 chromatin 0 0.438709292069764 0.999789476394654 0 hPsi_site_5688 iPseU_CNN:0.999789476394654;iRNA_PseU:0 5689 chr9 139929401 139929401 1 + A T SKCM 139929401 + 139929381 139929421 41 GCTCGGGGGTTTTGCCCAGAAATGGGTCAGAACGAAAGCCT GCTCGGGGGTTTTGCCCAGATATGGGTCAGAACGAAAGCCT Direct Gain 0 0.94873619210549 0 0.998790323734283 prediction 0.89747238421098 Functional Gain - C9orf139 ENSG00000180539 CDS Human antisense chr9:139929401 chr9:139929401 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106729 0 0 0 0 0 unknown 0 0.438752017728136 0.997580647468566 0 hPsi_site_5689 iPseU_CNN:0.997580647468566;iRNA_PseU:0 5690 chr18 29054145 29054145 1 + G A SKCM 29054145 - 29054125 29054165 41 GCTGCTCCAAGCTTAGTGGTCATTTCCATTCCTGAAGTGCC GCTGCTCCAAGCTTAGTGGTTATTTCCATTCCTGAAGTGCC Direct Gain 0 0.948724368621087 0 0.99049323797226 prediction 0.897448737242175 Functional Gain - DSG3 ENSG00000134757 CDS Human protein_coding chr18:29054145 chr18:29054145 nonsynonymous SNV 0.938 0 21 hPsi_associated_SNPs_106730 0 0 0 0 0 Nucleus 0 0.438718595464023 0.98098647594452 0 hPsi_site_5690 iPseU_CNN:0.98098647594452;iRNA_PseU:0 5691 chr11 121358786 121358786 1 + G T UCEC 121358786 + 121358766 121358806 41 AGTACCTCTGGATCACGTTTGACTTCTGCAACACTCTTCAA AGTACCTCTGGATCACGTTTTACTTCTGCAACACTCTTCAA Direct Gain 0 0.948717261621909 0 0.984323680400848 prediction 0.897434523243817 Functional Gain - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121358786 chr11:121358786 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106731 0 0 1 0 1 Nucleus 0 0.438724686788379 0.968647360801696 0 hPsi_site_5691 iPseU_CNN:0.968647360801696;iRNA_PseU:0 5692 chr8 68939555 68939555 1 + G A CESC 68939555 - 68939535 68939575 41 GGTAGCACATAAAATACCTTCAAAATAAGAGGGTACTTGCA GGTAGCACATAAAATACCTTTAAAATAAGAGGGTACTTGCA Direct Gain 0 0.948712207909896 0 0.986399829387665 prediction 0.897424415819793 Functional Gain - PREX2 ENSG00000046889 CDS Human protein_coding chr8:68939555 chr8:68939555 synonymous SNV . 0 21 hPsi_associated_SNPs_106732 0 0 0 0 0 Nucleus 0 0.438720510647948 0.97279965877533 0 hPsi_site_5692 iPseU_CNN:0.97279965877533;iRNA_PseU:0 5693 chr7 100473227 100473227 1 + G A LUSC 100473227 - 100473207 100473247 41 GCGCCTTCGATCGTACTCGTCATCACTGTCACCCATGGCAC GCGCCTTCGATCGTACTCGTTATCACTGTCACCCATGGCAC Direct Gain 0 0.948705301770118 0 0.952657282352448 prediction 0.897410603540236 Functional Gain - SRRT ENSG00000087087 CDS Human protein_coding chr7:100473227 chr7:100473227 nonsynonymous SNV 0.990 4 21 hPsi_associated_SNPs_106733 0 0 0 0 0 Nucleus 0 0.420353387988879 0.905314564704896 0 hPsi_site_5693 iPseU_CNN:0.905314564704896;iRNA_PseU:0 5694 chr2 131519789 131519789 1 + C A LUAD 131519789 - 131519769 131519809 41 GCTTGGGGGCCCTTCTCACTGTGGGGCCTCTGTTGCCCTCC GCTTGGGGGCCCTTCTCACTTTGGGGCCTCTGTTGCCCTCC Direct Gain 0 0.948701654673519 0 0.976277947425842 prediction 0.897403309347037 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131519789 chr2:131519789 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106734 0 0 0 0 0 Nucleus 0 0.438718599220776 0.952555894851684 0 hPsi_site_5694 iPseU_CNN:0.952555894851684;iRNA_PseU:0 5695 chr5 147820788 147820788 1 + G A OV 147820788 - 147820768 147820808 41 ATAATTACTTTCTTCATCGTCTTCAAAGTCGTATCGAGCGA ATAATTACTTTCTTCATCGTTTTCAAAGTCGTATCGAGCGA Direct Gain 0 0.948700909062528 0 0.959722280502319 prediction 0.897401818125056 Functional Gain - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820788 chr5:147820788 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106735 0 0 0 0 0 Ribosome 0 0.440470277089025 0.919444561004638 0 hPsi_site_5695 iPseU_CNN:0.919444561004638;iRNA_PseU:0 5696 chr2 103121890 103121890 1 + C T SKCM 103121890 + 103121870 103121910 41 GAGTGGAACTGGGCCTTCATCTGCTTCACCCTGGCCTTCTG GAGTGGAACTGGGCCTTCATTTGCTTCACCCTGGCCTTCTG Direct Gain 0 0.948694710186088 0 0.99999988079071 prediction 0.897389420372176 Functional Gain - SLC9A4 ENSG00000180251 CDS Human protein_coding chr2:103121890 chr2:103121890 synonymous SNV . 0 21 hPsi_associated_SNPs_106736 0 0 0 0 1 exosome 0 0.438746370988679 0.99999976158142 0 hPsi_site_5696 iPseU_CNN:0.99999976158142;iRNA_PseU:0 5697 chr16 28914158 28914158 1 + C T rs201014240 28914158 + 28914138 28914178 41 GAGGGCATAGACTGTGAGGTCTTCGAGGCCCCCGAGCCCAT GAGGGCATAGACTGTGAGGTTTTCGAGGCCCCCGAGCCCAT Direct Gain 0 0.94869125623594 0 0.974889039993286 prediction 0.897382512471881 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28914158 chr16:28914158 synonymous SNV . 0 21 hPsi_associated_SNPs_106737 0 0 0 0 2 chromatin 0 0.438718726369246 0.949778079986572 0 hPsi_site_5697 iPseU_CNN:0.949778079986572;iRNA_PseU:0 5698 chr11 125513723 125513723 1 + C T STAD 125513723 + 125513703 125513743 41 AGTCACTTCAGGTGGTGTGTCAGAGTCTCCCAGTGGATTTT AGTCACTTCAGGTGGTGTGTTAGAGTCTCCCAGTGGATTTT Direct Gain 0 0.948685630500233 0 0.998564660549164 prediction 0.897371261000466 Functional Gain - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513723 chr11:125513723 nonsynonymous SNV 0.245 0 21 hPsi_associated_SNPs_106738 0 0 1 2 2 Ribosome 0 0.438732127326941 0.997129321098328 0 hPsi_site_5698 iPseU_CNN:0.997129321098328;iRNA_PseU:0 5699 chr21 30419344 30419344 1 + C T UCEC 30419344 + 30419324 30419364 41 GGGAGCAATGGAGAAGTGGACATTTCCAATGGTTTCAAAAA GGGAGCAATGGAGAAGTGGATATTTCCAATGGTTTCAAAAA Direct Gain 0 0.948684445477715 0 0.0049273669719696 prediction 0.897368890955431 Functional Gain - USP16 ENSG00000156256 CDS Human protein_coding chr21:30419344 chr21:30419344 synonymous SNV . 0 21 hPsi_associated_SNPs_106739 0 0 1 0 0 Ribosome 0 0.4387776227144 0 0 hPsi_site_5699 iPseU_CNN:0;iRNA_PseU:0 5700 chr17 48149456 48149456 1 + C T BLCA 48149456 + 48149436 48149476 41 CGGGAACCTCCTTCCCTGCTCACCCCTCACTCCTTCTTCAT CGGGAACCTCCTTCCCTGCTTACCCCTCACTCCTTCTTCAT Direct Gain 0 0.948679270921898 0 0.999950528144836 prediction 0.897358541843796 Functional Gain - ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48149456 chr17:48149456 nonsynonymous SNV 0.986 1 21 hPsi_associated_SNPs_106740 0 0 0 0 0 Cytosol 0 0.438718591795062 0.999901056289672 0 hPsi_site_5700 iPseU_CNN:0.999901056289672;iRNA_PseU:0 5701 chr6 144086522 144086522 1 + G T LUSC 144086522 + 144086502 144086542 41 AGCAAAGCAGGGACAGTGGGGACCACCAAGGGCAAGAGAAA AGCAAAGCAGGGACAGTGGGTACCACCAAGGGCAAGAGAAA Direct Gain 0 0.948676473235217 0 0.388549268245697 prediction 0.897352946470433 Functional Gain - PHACTR2 ENSG00000112419 CDS Human protein_coding chr6:144086522 chr6:144086522 synonymous SNV . 0 21 hPsi_associated_SNPs_106741 0 0 1 0 0 Cytosol 0 0.438718593030931 0 0 hPsi_site_5701 iPseU_CNN:0;iRNA_PseU:0 5702 chr12 46053242 46053242 1 + G A rs146971612 46053242 - 46053222 46053262 41 ACCATGTTGGCCAGGCTGGTCTTGAACTCCTGAACTCGTGA ACCATGTTGGCCAGGCTGGTTTTGAACTCCTGAACTCGTGA Direct Gain 0 0.948676208148447 0 0.00714150071144104 prediction 0.897352416296894 Functional Gain - ANO6;LINC00938 ENSG00000257657;ENSG00000273015 intergenic Human other chr12:46053242 chr12:46053242 . . 0 21 hPsi_associated_SNPs_106742 0 0 0 0 0 unknown 0 0.438726856680166 0 0 hPsi_site_5702 iPseU_CNN:0;iRNA_PseU:0 5703 chr13 37577117 37577117 1 + T A STAD 37577117 - 37577097 37577137 41 ACTCCACAGATTACTGTAGTATTTCCCAACTTCACTAAAGC ACTCCACAGATTACTGTAGTTTTTCCCAACTTCACTAAAGC Direct Gain 0 0.948675757145551 0 0.162514060735703 prediction 0.897351514291102 Functional Gain - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37577117 chr13:37577117 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106743 0 0 0 0 0 Ribosome 0 0.440265548287016 0 0 hPsi_site_5703 iPseU_CNN:0;iRNA_PseU:0 5704 chr9 139927034 139927034 1 + G T rs182250360 139927034 + 139927014 139927054 41 GGAGAATCTTACACATTGAAGATGTACTGTGCTCAGCTCTT GGAGAATCTTACACATTGAATATGTACTGTGCTCAGCTCTT Direct Gain 0 0.948670068968475 0 0.894353628158569 prediction 0.897340137936951 Functional Gain - C9orf139;FUT7 ENSG00000180539;ENSG00000180549 UTR5 Human other chr9:139927034 chr9:139927034 . . 0 21 hPsi_associated_SNPs_106744 0 0 0 0 0 unknown 0 0.438643114855588 0.788707256317138 0 hPsi_site_5704 iPseU_CNN:0.788707256317138;iRNA_PseU:0 5705 chr1 207789982 207789982 1 + G T UCEC 207789982 + 207789962 207790002 41 ACACAGGAACTCCCTTTGGAGATATTCCCTATGGAAAAGAA ACACAGGAACTCCCTTTGGATATATTCCCTATGGAAAAGAA Direct Gain 0 0.948668852327388 0 0.999942064285278 prediction 0.897337704654776 Functional Gain - CR1 ENSG00000203710 CDS Human protein_coding chr1:207789982 chr1:207789982 nonsynonymous SNV 0.023 3 21 hPsi_associated_SNPs_106745 0 0 0 0 1 Nucleus 0 0.438724824074454 0.999884128570556 0 hPsi_site_5705 iPseU_CNN:0.999884128570556;iRNA_PseU:0 5706 chr14 42361125 42361125 1 + C T BLCA 42361125 + 42361105 42361145 41 AGCCGTCCTCCCGATTCTGTCACAGAGGGGCCCACGTCTAA AGCCGTCCTCCCGATTCTGTTACAGAGGGGCCCACGTCTAA Direct Gain 0 0.948663561354013 0 0.818916797637939 prediction 0.897327122708026 Functional Gain - LRFN5 ENSG00000165379 CDS Human protein_coding chr14:42361125 chr14:42361125 synonymous SNV . 0 21 hPsi_associated_SNPs_106746 0 0 0 0 1 Nucleus 0 0.438718853178309 0.637833595275878 0 hPsi_site_5706 iPseU_CNN:0.637833595275878;iRNA_PseU:0 5707 chr10 1120438 1120438 1 + C T SARC 1120438 + 1120418 1120458 41 TGATTCGGAGTGGGACCGGTCAGCATGTTCTGTAAGTGGCC TGATTCGGAGTGGGACCGGTTAGCATGTTCTGTAAGTGGCC Direct Gain 0 0.94866062821296 0 0.99356746673584 prediction 0.897321256425921 Functional Gain - WDR37 ENSG00000047056 CDS Human protein_coding chr10:1120438 chr10:1120438 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106747 0 0 1 0 0 Cytosol 0 0.438739675983907 0.98713493347168 0 hPsi_site_5707 iPseU_CNN:0.98713493347168;iRNA_PseU:0 5708 chr6 30593467 30593467 1 + C A UCEC 30593467 - 30593447 30593487 41 GGGGCCACTCTCTTCTTGGAGATGACCCTGGTAAAGCCGGC GGGGCCACTCTCTTCTTGGATATGACCCTGGTAAAGCCGGC Direct Gain 0 0.948658849851771 0 0.769493460655212 prediction 0.897317699703542 Functional Gain - MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593467 chr6:30593467 nonsynonymous SNV 0.777 2 21 hPsi_associated_SNPs_106748 0 0 0 0 0 Cytosol 0 0.438718593010713 0.538986921310424 0 hPsi_site_5708 iPseU_CNN:0.538986921310424;iRNA_PseU:0 5709 chr7 40789081 40789081 1 + A T LUSC 40789081 + 40789061 40789101 41 TGGAGCATCCAACTGTGGGGAAGATTTCCGTCCCAGGTCTG TGGAGCATCCAACTGTGGGGTAGATTTCCGTCCCAGGTCTG Direct Gain 0 0.948655689124994 0 0.981036961078644 prediction 0.897311378249988 Functional Gain - SUGCT ENSG00000175600 CDS Human protein_coding chr7:40789081 chr7:40789081 stopgain 0.986 0 21 hPsi_associated_SNPs_106749 0 0 0 0 2 cytosol 0 0.43871858462439 0.962073922157288 0 hPsi_site_5709 iPseU_CNN:0.962073922157288;iRNA_PseU:0 5710 chr1 228335185 228335185 1 + C A LUAD 228335185 - 228335165 228335205 41 GGCCGCAGATCGGTGGCCTTGATGTTCCGCACACCCTGCAG GGCCGCAGATCGGTGGCCTTTATGTTCCGCACACCCTGCAG Direct Gain 0 0.948654907134583 0 0.999893546104431 prediction 0.897309814269165 Functional Gain - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335185 chr1:228335185 synonymous SNV . 0 21 hPsi_associated_SNPs_106750 0 0 0 0 0 Endoplasmic reticulum 0 0.438716255493546 0.999787092208862 0 hPsi_site_5710 iPseU_CNN:0.999787092208862;iRNA_PseU:0 5711 chr16 31373164 31373164 1 + G A rs2230425 31373164 - 31373144 31373184 41 AAGGAGCTACTGCTTGTGGTCTCCGTACCTGGGGGAAGGCA AAGGAGCTACTGCTTGTGGTTTCCGTACCTGGGGGAAGGCA Direct Gain 0 0.948651994674855 0 0.0931346416473389 prediction 0.89730398934971 Functional Gain - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31373164 chr16:31373164 synonymous SNV . 0 21 hPsi_associated_SNPs_106751 0 0 0 0 0 Nucleus 0 0.438718389460793 0 0 hPsi_site_5711 iPseU_CNN:0;iRNA_PseU:0 5712 chr13 78182210 78182210 1 + C A UCEC 78182210 - 78182190 78182230 41 TTCAGGGGTCACTTTGATGAGATTATCAAGGCTCTGGCCCC TTCAGGGGTCACTTTGATGATATTATCAAGGCTCTGGCCCC Direct Gain 0 0.948647057079231 0 0.999584197998047 prediction 0.897294114158462 Functional Gain - SCEL ENSG00000136155 CDS Human protein_coding chr13:78182210 chr13:78182210 nonsynonymous SNV 0.871 2 21 hPsi_associated_SNPs_106752 0 0 0 0 0 Cytosol 0 0.438718592810366 0.999168395996094 0 hPsi_site_5712 iPseU_CNN:0.999168395996094;iRNA_PseU:0 5713 chr17 40766939 40766939 1 + C T COAD 40766939 + 40766919 40766959 41 GAGCAGTTCCGCAAGGAGGACATGTTCAAGGACAACTTTGA GAGCAGTTCCGCAAGGAGGATATGTTCAAGGACAACTTTGA Direct Gain 0 0.948646892550796 0 0.931642532348633 prediction 0.897293785101592 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40766939 chr17:40766939 synonymous SNV . 0 21 hPsi_associated_SNPs_106753 0 0 1 0 1 Ribosome 0 0.438718593030943 0.863285064697266 0 hPsi_site_5713 iPseU_CNN:0.863285064697266;iRNA_PseU:0 5714 chr1 109735389 109735389 1 + G A UCEC 109735389 - 109735369 109735409 41 GGAGTGGCAGGTTCCTGAATCTCGGTCAATATAGTAACCAG GGAGTGGCAGGTTCCTGAATTTCGGTCAATATAGTAACCAG Direct Gain 0 0.948646104667276 0 0.997845709323883 prediction 0.897292209334552 Functional Gain - KIAA1324 ENSG00000116299 CDS Human protein_coding chr1:109735389 chr1:109735389 nonsynonymous SNV 0.991 0 21 hPsi_associated_SNPs_106754 0 0 0 0 0 exosome 0 0.438718589266419 0.995691418647766 0 hPsi_site_5714 iPseU_CNN:0.995691418647766;iRNA_PseU:0 5715 chr1 160140523 160140523 1 + G A rs530955109 160140523 - 160140503 160140543 41 AAATTAGCTGGGCATGGTGGCATGTGCCCATAATCCCAGCC AAATTAGCTGGGCATGGTGGTATGTGCCCATAATCCCAGCC Direct Gain 0 0.948645540796241 0 0.998848140239716 prediction 0.897291081592482 Functional Gain - ATP1A4 ENSG00000132681 intronic Human protein_coding chr1:160140523 chr1:160140523 . . 0 21 hPsi_associated_SNPs_106755 0 0 0 0 0 exosome 0 0.438702885498958 0.997696280479432 0 hPsi_site_5715 iPseU_CNN:0.997696280479432;iRNA_PseU:0 5716 chr3 32032675 32032675 1 + T A rs111514380 32032675 - 32032655 32032695 41 ACAGTGCTGGGATTACAGGTATAAGCCACCCTGCCCAGCCC ACAGTGCTGGGATTACAGGTTTAAGCCACCCTGCCCAGCCC Direct Gain 0 0.948645059669846 0 0.918301343917847 prediction 0.897290119339692 Functional Gain - ZNF860 ENSG00000197385 UTR3 Human protein_coding chr3:32032675 chr3:32032675 . . 0 21 hPsi_associated_SNPs_106756 0 0 0 0 0 exosome 0 0.438718571703945 0.836602687835694 0 hPsi_site_5716 iPseU_CNN:0.836602687835694;iRNA_PseU:0 5717 chr10 12870801 12870801 1 + C T SKCM 12870801 + 12870781 12870821 41 CACGCTCTGTAGTTTCATTTCTTCTTCGTCGGGGGTCTCAG CACGCTCTGTAGTTTCATTTTTTCTTCGTCGGGGGTCTCAG Direct Gain 0 0.948638358305468 0 0.994613409042358 prediction 0.897276716610935 Functional Gain - CAMK1D ENSG00000183049 CDS Human protein_coding chr10:12870801 chr10:12870801 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_106757 0 0 1 0 1 Ribosome 0 0.438718554914665 0.989226818084716 0 hPsi_site_5717 iPseU_CNN:0.989226818084716;iRNA_PseU:0 5718 chr17 28754415 28754415 1 + C A GBM 28754415 - 28754395 28754435 41 TTCTGCCAATTACACTTATTGAATCTCCTGTATGATATGAT TTCTGCCAATTACACTTATTTAATCTCCTGTATGATATGAT Direct Gain 0 0.948637410435919 0 0.325065672397614 prediction 0.897274820871839 Functional Gain - CPD ENSG00000108582 CDS Human protein_coding chr17:28754415 chr17:28754415 stopgain 0.974 0 21 hPsi_associated_SNPs_106758 0 0 0 0 0 Nucleus 0 0.438997660189703 0 0 hPsi_site_5718 iPseU_CNN:0;iRNA_PseU:0 5719 chr11 46722615 46722615 1 + G A BRCA 46722615 - 46722595 46722635 41 TTCTTCCCCTCCAAGAGCAGCTCCTCCGCCTCCTCCATTCC TTCTTCCCCTCCAAGAGCAGTTCCTCCGCCTCCTCCATTCC Direct Gain 0 0.948626940628394 0 0.984244346618652 prediction 0.897253881256789 Functional Gain - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46722615 chr11:46722615 synonymous SNV . 0 21 hPsi_associated_SNPs_106759 0 0 0 0 0 cytosol 0 0.438718592994544 0.968488693237304 0 hPsi_site_5719 iPseU_CNN:0.968488693237304;iRNA_PseU:0 5720 chr16 55807889 55807889 1 + C T rs28656851 55807889 + 55807869 55807909 41 GGAGAATTCACTCATTGATTCATTTGTTCACACAACAAAAC GGAGAATTCACTCATTGATTTATTTGTTCACACAACAAAAC Direct Gain 0 0.948626633665408 0 0.99885892868042 prediction 0.897253267330815 Functional Gain - CES1P1 ENSG00000228695 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:55807889 chr16:55807889 . . 0 21 hPsi_associated_SNPs_106760 0 0 0 0 0 unknown 0 0.436778758404551 0.99771785736084 0 hPsi_site_5720 iPseU_CNN:0.99771785736084;iRNA_PseU:0 5721 chr4 123336763 123336763 1 + C A LUAD 123336763 - 123336743 123336783 41 AGTAATTTTAACCTTTCAGTGATCTTCCCACTCAGGCCATC AGTAATTTTAACCTTTCAGTTATCTTCCCACTCAGGCCATC Direct Gain 0 0.948626283112329 0 0.999832034111023 prediction 0.897252566224658 Functional Gain - ADAD1 ENSG00000164113 CDS Human protein_coding chr4:123336763 chr4:123336763 synonymous SNV . 0 21 hPsi_associated_SNPs_106761 0 0 0 0 0 exosome 0 0.43872870054039 0.999664068222046 0 hPsi_site_5721 iPseU_CNN:0.999664068222046;iRNA_PseU:0 5722 chrX 37518884 37518884 1 + G A rs142780377 37518884 - 37518864 37518904 41 CCATGGCACCAGTGCACCAGCTCATTCTCTCTCTCGATGGT CCATGGCACCAGTGCACCAGTTCATTCTCTCTCTCGATGGT Direct Gain 0 0.948624414310552 0 0.993412375450134 prediction 0.897248828621103 Functional Gain - LANCL3 ENSG00000147036 CDS Human protein_coding chrX:37518884 chrX:37518884 synonymous SNV . 0 21 hPsi_associated_SNPs_106762 0 0 0 0 0 chromatin 0 0.438718376805394 0.986824750900268 0 hPsi_site_5722 iPseU_CNN:0.986824750900268;iRNA_PseU:0 5723 chr1 99774485 99774485 1 + C A rs550978597 99774485 - 99774465 99774505 41 GCAGGGGTTTTTGTTTGCTTGTTTTTGTCCTTCAGAGTACT GCAGGGGTTTTTGTTTGCTTTTTTTTGTCCTTCAGAGTACT Direct Gain 0 0.948620516800629 0 0.0139934718608856 prediction 0.897241033601257 Functional Gain - PLPPR4 ENSG00000117600 UTR3 Human protein_coding chr1:99774485 chr1:99774485 . . 0 21 hPsi_associated_SNPs_106763 0 0 0 0 0 exosome 0 0.438619287300218 0 0 hPsi_site_5723 iPseU_CNN:0;iRNA_PseU:0 5724 chr11 99827605 99827605 1 + C A COAD 99827605 - 99827585 99827625 41 AGGTTGCCTGTCTCCTGGGAGATGAACCGCCGGCTGTCTTC AGGTTGCCTGTCTCCTGGGATATGAACCGCCGGCTGTCTTC Direct Gain 0 0.948617205767194 0 0.99963241815567 prediction 0.897234411534388 Functional Gain - CNTN5 ENSG00000149972 CDS Human protein_coding chr11:99827605 chr11:99827605 synonymous SNV . 0 21 hPsi_associated_SNPs_106764 0 0 0 0 0 Endoplasmic reticulum 0 0.437614382365439 0.99926483631134 0 hPsi_site_5724 iPseU_CNN:0.99926483631134;iRNA_PseU:0 5725 chr22 41556648 41556648 1 + A T LUAD 41556648 + 41556628 41556668 41 TGGCCTTCTTGCCGACAGGTATCATTTCTGTGAGAAGTGTT TGGCCTTCTTGCCGACAGGTTTCATTTCTGTGAGAAGTGTT Direct Gain 0 0.948615408896591 0 0.999911725521088 prediction 0.897230817793182 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41556648 chr22:41556648 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106765 0 0 1 0 2 Cytosol 0 0.439762477485772 0.999823451042176 0 hPsi_site_5725 iPseU_CNN:0.999823451042176;iRNA_PseU:0 5726 chr16 3100309 3100309 1 + C T LUAD 3100309 + 3100289 3100329 41 CAGGAGACCGTGCGGGTCCTCATGAGCTATGCCCTGATGGC CAGGAGACCGTGCGGGTCCTTATGAGCTATGCCCTGATGGC Direct Gain 0 0.948614182657069 0 0.999719381332397 prediction 0.897228365314137 Functional Gain - MMP25 ENSG00000008516 CDS Human protein_coding chr16:3100309 chr16:3100309 synonymous SNV . 0 21 hPsi_associated_SNPs_106766 0 0 0 0 0 chromatin 0 0.438292404061641 0.999438762664794 0 hPsi_site_5726 iPseU_CNN:0.999438762664794;iRNA_PseU:0 5727 chrX 153640545 153640545 1 + C A UCEC 153640545 - 153640525 153640565 41 ACTGGCCCGGGTACCCCAGAGATGAGGGTCGTCCATGCAGG ACTGGCCCGGGTACCCCAGATATGAGGGTCGTCCATGCAGG Direct Gain 0 0.948606720879065 0 0.332972168922424 prediction 0.897213441758129 Functional Gain - TAZ ENSG00000102125 CDS Human protein_coding chrX:153640545 chrX:153640545 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106767 0 0 0 0 0 Ribosome 0 0.437941698757509 0 0 hPsi_site_5727 iPseU_CNN:0;iRNA_PseU:0 5728 chr19 10572296 10572296 1 + C T LUSC 10572296 + 10572276 10572316 41 CTGCAGGAGGACAACTGCGACATCTTCCAGAACCTCAGCAA CTGCAGGAGGACAACTGCGATATCTTCCAGAACCTCAGCAA Direct Gain 0 0.948598383747096 0 0.993643999099731 prediction 0.897196767494191 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10572296 chr19:10572296 synonymous SNV . 0 21 hPsi_associated_SNPs_106768 0 0 0 0 2 chromatin 0 0.438619106472883 0.987287998199462 0 hPsi_site_5728 iPseU_CNN:0.987287998199462;iRNA_PseU:0 5729 chr11 94801692 94801692 1 + G T SARC 94801692 + 94801672 94801712 41 AGGTGGTGTAAATTAATATGGATAATTTTATTTACCTCCAG AGGTGGTGTAAATTAATATGTATAATTTTATTTACCTCCAG Direct Gain 0 0.948591834686098 0 0.023326188325882 prediction 0.897183669372196 Functional Gain - SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94801692 chr11:94801692 . . 0 21 hPsi_associated_SNPs_106769 0 0 1 0 0 Cytosol 0 0.438718592994928 0 0 hPsi_site_5729 iPseU_CNN:0;iRNA_PseU:0 5730 chr1 197313422 197313422 1 + G A rs114846212 197313422 - 197313402 197313442 41 ACATTCGTCAATTTCCAATTCACAGTTTACACCTTTTAAAA ACATTCGTCAATTTCCAATTTACAGTTTACACCTTTTAAAA Direct Gain 0 0.948590187792902 0 0.992811441421509 prediction 0.897180375585804 Functional Gain - CRB1 ENSG00000134376 CDS Human protein_coding chr1:197313422 chr1:197313422 nonsynonymous SNV 0.978 4 21 hPsi_associated_SNPs_106770 3 0 0 0 0 exosome 0 0.438717208689783 0.985622882843018 0 hPsi_site_5730 iPseU_CNN:0.985622882843018;iRNA_PseU:0 5731 chrX 133956986 133956986 1 + G A rs187485942 133956986 - 133956966 133957006 41 TAGTAGAGATGGGGTTTCACCATGTTGACCAGGCTGATCTC TAGTAGAGATGGGGTTTCACTATGTTGACCAGGCTGATCTC Direct Gain 0 0.948590027929355 0 0.439705848693848 prediction 0.89718005585871 Functional Gain - FAM122C ENSG00000156500 UTR3 Human protein_coding chrX:133956986 chrX:133956986 . . 0 21 hPsi_associated_SNPs_106771 0 0 0 0 0 Cytosol 0 0.438718444045862 0 0 hPsi_site_5731 iPseU_CNN:0;iRNA_PseU:0 5732 chr1 110085756 110085756 1 + G T BLCA 110085756 + 110085736 110085776 41 TCCCGGAGGTGGGGCTACGGGATGTTGCTTCGGAATCTGTG TCCCGGAGGTGGGGCTACGGTATGTTGCTTCGGAATCTGTG Direct Gain 0 0.948583465387379 0 0.909624934196472 prediction 0.897166930774759 Functional Gain - GPR61 ENSG00000156097 CDS Human protein_coding chr1:110085756 chr1:110085756 nonsynonymous SNV 0.131 1 21 hPsi_associated_SNPs_106772 0 0 0 0 0 exosome 0 0.438718349188851 0.819249868392944 0 hPsi_site_5732 iPseU_CNN:0.819249868392944;iRNA_PseU:0 5733 chr1 16255494 16255494 1 + C T COAD 16255494 + 16255474 16255514 41 GGACCAGAAACTTCAGGTCTCTCAGACGGAGCCTGCAAAAT GGACCAGAAACTTCAGGTCTTTCAGACGGAGCCTGCAAAAT Direct Gain 0 0.948581355208406 0 0.999672055244446 prediction 0.897162710416812 Functional Gain - SPEN ENSG00000065526 CDS Human protein_coding chr1:16255494 chr1:16255494 nonsynonymous SNV 0.973 0 21 hPsi_associated_SNPs_106773 0 0 1 0 0 Endoplasmic reticulum 0 0.438718902703208 0.999344110488892 0 hPsi_site_5733 iPseU_CNN:0.999344110488892;iRNA_PseU:0 5734 chr9 84532180 84532180 1 + C T SKCM 84532180 + 84532160 84532200 41 ACGTCCTCAGAGCAAAATTTCAGAGCTATCTGTGTCAGACA ACGTCCTCAGAGCAAAATTTTAGAGCTATCTGTGTCAGACA Direct Gain 0 0.948578522755968 0 0.999889373779297 prediction 0.897157045511936 Functional Gain - SPATA31D5P ENSG00000240632 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:84532180 chr9:84532180 . . 0 21 hPsi_associated_SNPs_106774 0 0 0 0 0 unknown 0 0.438719264189863 0.999778747558594 0 hPsi_site_5734 iPseU_CNN:0.999778747558594;iRNA_PseU:0 5735 chr8 125562077 125562077 1 + G A STAD 125562077 - 125562057 125562097 41 CCACCACAGTGGGGGCAAATCACCTTCCTTTCGGGCAGGGG CCACCACAGTGGGGGCAAATTACCTTCCTTTCGGGCAGGGG Direct Gain 0 0.948576600327562 0 0.999806642532349 prediction 0.897153200655125 Functional Gain - NDUFB9 ENSG00000147684 CDS Human protein_coding chr8:125562077 chr8:125562077 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_106775 0 0 0 0 0 Ribosome 0 0.438718592578456 0.999613285064698 0 hPsi_site_5735 iPseU_CNN:0.999613285064698;iRNA_PseU:0 5736 chr16 86613581 86613581 1 + C T rs79390329 86613581 + 86613561 86613601 41 ACTGGGAGCAGCTACGGAGACTTAAAAGATCCCCGCGGGGT ACTGGGAGCAGCTACGGAGATTTAAAAGATCCCCGCGGGGT Direct Gain 0 0.948560541986147 0 0.999956846237183 prediction 0.897121083972294 Functional Gain - FOXL1 ENSG00000176678 UTR3 Human protein_coding chr16:86613581 chr16:86613581 . . 0 21 hPsi_associated_SNPs_106776 0 0 0 0 0 exosome 0 0.438717461302196 0.999913692474366 0 hPsi_site_5736 iPseU_CNN:0.999913692474366;iRNA_PseU:0 5737 chr14 35409607 35409607 1 + C T CESC 35409607 + 35409587 35409627 41 AAGGAAAACCATGCAGTCCTCATCTCCCTGGGCTTCCGCTT AAGGAAAACCATGCAGTCCTTATCTCCCTGGGCTTCCGCTT Direct Gain 0 0.948554199186879 0 0.999961197376251 prediction 0.897108398373759 Functional Gain - IGBP1P1 ENSG00000226677 ncRNA_exonic Human processed_pseudogene chr14:35409607 chr14:35409607 . . 0 21 hPsi_associated_SNPs_106777 0 0 0 0 0 unknown 0 0.43876716061326 0.999922394752502 0 hPsi_site_5737 iPseU_CNN:0.999922394752502;iRNA_PseU:0 5738 chr10 75559813 75559813 1 + G A BRCA 75559813 - 75559793 75559833 41 GCAGCAAGTGAGGGAGGAGTCACTGAATAAGGGTACTGAGC GCAGCAAGTGAGGGAGGAGTTACTGAATAAGGGTACTGAGC Direct Gain 0 0.948550279506774 0 0.00574499368667603 prediction 0.897100559013548 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75559813 chr10:75559813 synonymous SNV . 0 21 hPsi_associated_SNPs_106778 0 0 0 0 0 Cytosol 0 0.43871594494228 0 0 hPsi_site_5738 iPseU_CNN:0;iRNA_PseU:0 5739 chr1 120054208 120054208 1 + C T rs6200 120054208 + 120054188 120054228 41 AAGAGAGCCTGCCAGGACGTCTCGGTCATCATCCACACCGC AAGAGAGCCTGCCAGGACGTTTCGGTCATCATCCACACCGC Direct Gain 0 0.948548362154173 0 0.999737501144409 prediction 0.897096724308346 Functional Gain - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120054208 chr1:120054208 synonymous SNV . 0 21 hPsi_associated_SNPs_106779 0 0 0 0 2 exosome 0 0.441012364252971 0.999475002288818 0 hPsi_site_5739 iPseU_CNN:0.999475002288818;iRNA_PseU:0 5740 chr7 87020948 87020948 1 + C T BLCA 87020948 + 87020928 87020968 41 CTATGACAAGACATTTTTATCATGGCCGTACAGAGACTATG CTATGACAAGACATTTTTATTATGGCCGTACAGAGACTATG Direct Gain 0 0.948536109588632 0 0.556185007095337 prediction 0.897072219177263 Functional Gain - CROT ENSG00000005469 CDS Human protein_coding chr7:87020948 chr7:87020948 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_106780 0 0 0 0 2 Nucleus 0 0.438717036288978 0.112370014190674 0 hPsi_site_5740 iPseU_CNN:0.112370014190674;iRNA_PseU:0 5741 chr20 391170 391170 1 + C T rs7059 391170 + 391150 391190 41 AGCATAGCTCAAAAATTGTACACACTTCTTCCGTTAATTCC AGCATAGCTCAAAAATTGTATACACTTCTTCCGTTAATTCC Direct Gain 0 0.948533337833785 0 0.999993085861206 prediction 0.897066675667571 Functional Gain - RBCK1 ENSG00000125826 CDS Human protein_coding chr20:391170 chr20:391170 synonymous SNV . 0 21 hPsi_associated_SNPs_106781 0 0 1 1 0 Ribosome 0 0.438946453244652 0.999986171722412 0 hPsi_site_5741 iPseU_CNN:0.999986171722412;iRNA_PseU:0 5742 chr5 175925944 175925944 1 + G A BLCA 175925944 - 175925924 175925964 41 AGGCCTCATCCTGCTGTTGTCTCAGCACTTGGGTCTGGTTT AGGCCTCATCCTGCTGTTGTTTCAGCACTTGGGTCTGGTTT Direct Gain 0 0.948531676144028 0 0.891688942909241 prediction 0.897063352288055 Functional Gain - FAF2 ENSG00000113194 CDS Human protein_coding chr5:175925944 chr5:175925944 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106782 0 0 0 0 0 Endoplasmic reticulum 0 0.438717252765057 0.783377885818482 0 hPsi_site_5742 iPseU_CNN:0.783377885818482;iRNA_PseU:0 5743 chr12 6927663 6927663 1 + C T UCEC 6927663 + 6927643 6927683 41 GTCGCCGGCCTCCTGCTTTTCATTGGGCTAGGCATCTTCTT GTCGCCGGCCTCCTGCTTTTTATTGGGCTAGGCATCTTCTT Direct Gain 0 0.948530606058186 0 0.999988794326782 prediction 0.897061212116372 Functional Gain - CD4 ENSG00000010610 CDS Human protein_coding chr12:6927663 chr12:6927663 synonymous SNV . 0 21 hPsi_associated_SNPs_106783 0 0 0 0 1 Endoplasmic reticulum 0 0.438718592993888 0.999977588653564 0 hPsi_site_5743 iPseU_CNN:0.999977588653564;iRNA_PseU:0 5744 chrX 153670977 153670977 1 + G A BLCA 153670977 - 153670957 153670997 41 ACGTCGTTCTGTTTGCGCTTCATGTTCTCAAAGTCAAAGGC ACGTCGTTCTGTTTGCGCTTTATGTTCTCAAAGTCAAAGGC Direct Gain 0 0.94852951017696 0 0.421653270721436 prediction 0.89705902035392 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153670977 chrX:153670977 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106784 0 0 0 0 0 Cytosol 0 0.440156932347008 0 0 hPsi_site_5744 iPseU_CNN:0;iRNA_PseU:0 5745 chr1 180907837 180907837 1 + G A BLCA 180907837 - 180907817 180907857 41 TGTCACTCACCTTGACAGCACATGTCCTCCAGATCCTGACC TGTCACTCACCTTGACAGCATATGTCCTCCAGATCCTGACC Direct Gain 0 0.94852939030992 0 0.998177886009216 prediction 0.897058780619839 Functional Gain - KIAA1614 ENSG00000135835 CDS Human protein_coding chr1:180907837 chr1:180907837 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_106785 0 0 0 0 0 nucleus 0 0.438357662400273 0.996355772018432 0 hPsi_site_5745 iPseU_CNN:0.996355772018432;iRNA_PseU:0 5746 chr20 43243200 43243200 1 + G A STAD 43243200 - 43243180 43243220 41 TAGGAGGACTCGACCTCCATCATGCCTGTCGCATCGCTCCT TAGGAGGACTCGACCTCCATTATGCCTGTCGCATCGCTCCT Direct Gain 0 0.948527175371401 0 0.993737816810608 prediction 0.897054350742802 Functional Gain - PKIG ENSG00000168734 CDS Human protein_coding chr20:43243200 chr20:43243200 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106786 0 0 0 0 0 Ribosome 0 0.438718533345178 0.987475633621216 0 hPsi_site_5746 iPseU_CNN:0.987475633621216;iRNA_PseU:0 5747 chr9 5757430 5757430 1 + C T STAD 5757430 + 5757410 5757450 41 GTGAGTACAGAGAATGGAATCACCTTGAAAATGCCACAGCA GTGAGTACAGAGAATGGAATTACCTTGAAAATGCCACAGCA Direct Gain 0 0.948519748568413 0 0.974543571472168 prediction 0.897039497136826 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5757430 chr9:5757430 synonymous SNV . 0 21 hPsi_associated_SNPs_106787 0 0 0 0 1 Nucleus 0 0.438718714356486 0.949087142944336 0 hPsi_site_5747 iPseU_CNN:0.949087142944336;iRNA_PseU:0 5748 chr10 79688730 79688730 1 + G A rs190294378 79688730 - 79688710 79688750 41 GCAGTGGTGCAATTTCAGCTCACTGCAACCTCCACCTCCTG GCAGTGGTGCAATTTCAGCTTACTGCAACCTCCACCTCCTG Direct Gain 0 0.948516968585161 0 0.567010700702667 prediction 0.897033937170322 Functional Gain - DLG5-AS1 ENSG00000233871 ncRNA_intronic Human processed_transcript chr10:79688730 chr10:79688730 . . 0 21 hPsi_associated_SNPs_106788 0 0 0 0 0 unknown 0 0.4387137528716 0.134021401405334 0 hPsi_site_5748 iPseU_CNN:0.134021401405334;iRNA_PseU:0 5749 chr16 58552688 58552688 1 + G A UCEC 58552688 - 58552668 58552708 41 GCTGCCCTCTTCCCTTTTATCATCTCCCCCTCCATCCTGGT GCTGCCCTCTTCCCTTTTATTATCTCCCCCTCCATCCTGGT Direct Gain 0 0.948513939954671 0 0.998431205749512 prediction 0.897027879909343 Functional Gain - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552688 chr16:58552688 nonsynonymous SNV 0.119 0 21 hPsi_associated_SNPs_106789 0 0 1 0 0 Ribosome 0 0.43871944454572 0.996862411499024 0 hPsi_site_5749 iPseU_CNN:0.996862411499024;iRNA_PseU:0 5750 chr12 121439903 121439903 1 + G A rs140584786 121439903 - 121439883 121439923 41 GCCTTGCTGCCTTGTGAGCTCAGCTACTCCTGCCCCAAACA GCCTTGCTGCCTTGTGAGCTTAGCTACTCCTGCCCCAAACA Direct Gain 0 0.948513475055141 0 0.993727684020996 prediction 0.897026950110283 Functional Gain - HNF1A ENSG00000135100 UTR3 Human protein_coding chr12:121439903 chr12:121439903 . . 0 21 hPsi_associated_SNPs_106790 1 0 0 0 0 cytosol 0 0.439559217112241 0.987455368041992 0 hPsi_site_5750 iPseU_CNN:0.987455368041992;iRNA_PseU:0 5751 chr5 125821384 125821384 1 + C A ESCA 125821384 - 125821364 125821404 41 GTAAGATTCCAACAGTTTCTGACAGACCTGTTGGGAGGAAA GTAAGATTCCAACAGTTTCTTACAGACCTGTTGGGAGGAAA Direct Gain 0 0.948511562568173 0 0.999732494354248 prediction 0.897023125136346 Functional Gain - GRAMD2B ENSG00000155324 CDS Human protein_coding chr5:125821384 chr5:125821384 stopgain 0.996 0 21 hPsi_associated_SNPs_106791 0 0 0 0 0 Nucleus 0 0.438719621859835 0.999464988708496 0 hPsi_site_5751 iPseU_CNN:0.999464988708496;iRNA_PseU:0 5752 chr19 42212653 42212653 1 + G A LIHC 42212653 - 42212633 42212673 41 GGAGGGGCCGAGGGAGACTCCATGGTCTCTGCTGTCTGCTC GGAGGGGCCGAGGGAGACTCTATGGTCTCTGCTGTCTGCTC Direct Gain 0 0.948507107827026 0 0.274843633174896 prediction 0.897014215654051 Functional Gain - CEACAM5 ENSG00000105388;ENSG00000267881 CDS Human other chr19:42212653 chr19:42212653 nonsynonymous SNV 0.121 3 21 hPsi_associated_SNPs_106792 0 0 0 0 0 Cytosol 0 0.438718717030265 0 0 hPsi_site_5752 iPseU_CNN:0;iRNA_PseU:0 5753 chr20 57253751 57253751 1 + G A rs542223532 57253751 - 57253731 57253771 41 GGGCCAGCTCCAGGCTGGGTCTGTCTCTCCCACCTTGGGAA GGGCCAGCTCCAGGCTGGGTTTGTCTCTCCCACCTTGGGAA Direct Gain 0 0.948505977444876 0 0.69163978099823 prediction 0.897011954889753 Functional Gain - STX16-NPEPL1 ENSG00000124222 UTR3 Human protein_coding chr20:57253751 chr20:57253751 . . 0 21 hPsi_associated_SNPs_106793 0 0 0 0 0 exosome 0 0.438718729846587 0.38327956199646 0 hPsi_site_5753 iPseU_CNN:0.38327956199646;iRNA_PseU:0 5754 chrX 51075151 51075151 1 + G A rs1151715 51075151 - 51075131 51075171 41 AAACCCACAGGCAGTTGTTTCACACAAGACAGGGGCAAAGG AAACCCACAGGCAGTTGTTTTACACAAGACAGGGGCAAAGG Direct Gain 0 0.94850097807594 0 0.99203634262085 prediction 0.89700195615188 Functional Gain - NUDT10 ENSG00000122824 UTR5 Human protein_coding chrX:51075151 chrX:51075151 . . 0 21 hPsi_associated_SNPs_106794 0 0 0 0 0 exosome 0 0.438718764323435 0.9840726852417 0 hPsi_site_5754 iPseU_CNN:0.9840726852417;iRNA_PseU:0 5755 chr2 132021869 132021869 1 + C T UCEC 132021869 + 132021849 132021889 41 GAGCTGCCCGATGGCCAGGTCATCACCATCGGCAACGAGCG GAGCTGCCCGATGGCCAGGTTATCACCATCGGCAACGAGCG Direct Gain 0 0.948484056805947 0 0.99853515625 prediction 0.896968113611894 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021869 chr2:132021869 synonymous SNV . 0 21 hPsi_associated_SNPs_106795 0 0 0 0 0 chromatin 0 0.438715404050106 0.9970703125 0 hPsi_site_5755 iPseU_CNN:0.9970703125;iRNA_PseU:0 5756 chr1 43647246 43647246 1 + C T SKCM 43647246 + 43647226 43647266 41 TGTTGGCCTTGTCCATCAGTCCCAATCGGCGGTACCTCGCT TGTTGGCCTTGTCCATCAGTTCCAATCGGCGGTACCTCGCT Direct Gain 0 0.948477378345012 0 1 prediction 0.896954756690024 Functional Gain - CFAP57 ENSG00000243710 CDS Human protein_coding chr1:43647246 chr1:43647246 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106796 0 0 0 0 1 exosome 0 0.438718594369459 1 0 hPsi_site_5756 iPseU_CNN:1;iRNA_PseU:0 5757 chr19 22846700 22846700 1 + G A LUSC 22846700 - 22846680 22846720 41 TTTTCTTAACTGTAAATTTTCACATCCACATTTTTTATATC TTTTCTTAACTGTAAATTTTTACATCCACATTTTTTATATC Direct Gain 0 0.948472089561987 0 0.753038108348846 prediction 0.896944179123974 Functional Gain - ZNF492 ENSG00000229676 CDS Human protein_coding chr19:22846700 chr19:22846700 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106797 0 0 0 0 0 exosome 0 0.438718368623206 0.506076216697692 0 hPsi_site_5757 iPseU_CNN:0.506076216697692;iRNA_PseU:0 5758 chr7 128486150 128486150 1 + G A UCEC 128486150 - 128486130 128486170 41 TCTGTCACATAGGTGTCTGTCTTGGCCCCCGAGGGGTTGAG TCTGTCACATAGGTGTCTGTTTTGGCCCCCGAGGGGTTGAG Direct Gain 0 0.948459934451274 0 0.916576027870178 prediction 0.896919868902547 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128486150 chr7:128486150 synonymous SNV . 0 21 hPsi_associated_SNPs_106798 0 0 0 0 0 chromatin 0 0.438718582601987 0.833152055740356 0 hPsi_site_5758 iPseU_CNN:0.833152055740356;iRNA_PseU:0 5759 chr11 123989789 123989789 1 + G A SKCM 123989789 - 123989769 123989809 41 AGAAAGAAAATACCTGGCTTCATGTTAGGCATCCCCATCTC AGAAAGAAAATACCTGGCTTTATGTTAGGCATCCCCATCTC Direct Gain 0 0.948457218083616 0 0.999777436256409 prediction 0.896914436167232 Functional Gain - VWA5A ENSG00000110002 CDS Human protein_coding chr11:123989789 chr11:123989789 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106799 0 0 0 0 0 nucleus 0 0.43874979513898 0.999554872512818 0 hPsi_site_5759 iPseU_CNN:0.999554872512818;iRNA_PseU:0 5760 chr4 30724968 30724968 1 + G T LUSC 30724968 + 30724948 30724988 41 ATGACCCTAAGTTTATGCAGGACGTCTTCACCTTTTATGTG ATGACCCTAAGTTTATGCAGTACGTCTTCACCTTTTATGTG Direct Gain 0 0.948455991452361 0 0.92421692609787 prediction 0.896911982904721 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724968 chr4:30724968 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_106800 0 0 1 0 0 Ribosome 0 0.438685626339141 0.84843385219574 0 hPsi_site_5760 iPseU_CNN:0.84843385219574;iRNA_PseU:0 5761 chr7 148947825 148947825 1 + G A HNSC 148947825 - 148947805 148947845 41 TTCTGCCAATCCTCCAGATTCTCCCATTCCTGCTCGGTGAA TTCTGCCAATCCTCCAGATTTTCCCATTCCTGCTCGGTGAA Direct Gain 0 0.948450225574109 0 0.151467025279999 prediction 0.896900451148218 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148947825 chr7:148947825 synonymous SNV . 0 21 hPsi_associated_SNPs_106801 0 0 0 0 0 Cytosol 0 0.438718636478135 0 0 hPsi_site_5761 iPseU_CNN:0;iRNA_PseU:0 5762 chr2 131904340 131904340 1 + C T BLCA 131904340 + 131904320 131904360 41 TTAGGGTCTCTATTTTGGGTCTTCTAGGGGCCTCAAGGTCT TTAGGGTCTCTATTTTGGGTTTTCTAGGGGCCTCAAGGTCT Direct Gain 0 0.94845012992886 0 0.967111587524414 prediction 0.89690025985772 Functional Gain - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131904340 chr2:131904340 synonymous SNV . 0 21 hPsi_associated_SNPs_106802 0 0 1 0 0 Ribosome 0 0.438718592995058 0.934223175048828 0 hPsi_site_5762 iPseU_CNN:0.934223175048828;iRNA_PseU:0 5763 chr11 47594902 47594902 1 + G A SARC 47594902 - 47594882 47594922 41 GGTGCCAACCTCAACGGGATCATCTACTTACTAGGGGGGGA GGTGCCAACCTCAACGGGATTATCTACTTACTAGGGGGGGA Direct Gain 0 0.948447556791772 0 0.974538326263428 prediction 0.896895113583545 Functional Gain - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594902 chr11:47594902 synonymous SNV . 0 21 hPsi_associated_SNPs_106803 0 0 1 0 0 nucleus 0 0.438718593276235 0.949076652526856 0 hPsi_site_5763 iPseU_CNN:0.949076652526856;iRNA_PseU:0 5764 chr18 61449693 61449693 1 + C T SKCM 61449693 + 61449673 61449713 41 CAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGAGCCTCTT CAAGGAAATGGAAATGTGTTTTTTTCCTCTCTGAGCCTCTT Direct Gain 0 0.948445568422599 0 0.359993636608124 prediction 0.896891136845198 Functional Gain - SERPINB7 ENSG00000166396 CDS Human protein_coding chr18:61449693 chr18:61449693 synonymous SNV . 0 21 hPsi_associated_SNPs_106804 0 0 0 0 1 exosome 0 0.438709901114731 0 0 hPsi_site_5764 iPseU_CNN:0;iRNA_PseU:0 5765 chr17 42225813 42225813 1 + G A STAD 42225813 - 42225793 42225833 41 CCCGCTTTGTGGATGGCAGGCACAGGCCCCTTCTGGCAAGA CCCGCTTTGTGGATGGCAGGTACAGGCCCCTTCTGGCAAGA Direct Gain 0 0.948444084025183 0 0.999492287635803 prediction 0.896888168050365 Functional Gain - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225813 chr17:42225813 synonymous SNV . 0 21 hPsi_associated_SNPs_106805 0 0 0 0 0 chromatin 0 0.430311437677643 0.998984575271606 0 hPsi_site_5765 iPseU_CNN:0.998984575271606;iRNA_PseU:0 5766 chr10 96493179 96493179 1 + C T SKCM 96493179 + 96493159 96493199 41 TTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGTAA TTTAAGAAAAGTGACTACTTTATGCCTTTCTCAGCAGGTAA Direct Gain 0 0.948443798593985 0 0.226122438907623 prediction 0.896887597187971 Functional Gain - CYP2C18 ENSG00000108242 CDS Human protein_coding chr10:96493179 chr10:96493179 synonymous SNV . 0 21 hPsi_associated_SNPs_106806 0 0 0 0 1 exosome 0 0.438712433727903 0 0 hPsi_site_5766 iPseU_CNN:0;iRNA_PseU:0 5767 chr13 58208026 58208026 1 + C T CESC 58208026 + 58208006 58208046 41 CGTGGCGCGGGACGGGGGCTCTCCTCCCCTCAACTCCACCA CGTGGCGCGGGACGGGGGCTTTCCTCCCCTCAACTCCACCA Direct Gain 0 0.948440300640748 0 0.999553442001343 prediction 0.896880601281496 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58208026 chr13:58208026 nonsynonymous SNV 0.787 0 21 hPsi_associated_SNPs_106807 0 0 0 0 0 exosome 0 0.438888450410027 0.999106884002686 0 hPsi_site_5767 iPseU_CNN:0.999106884002686;iRNA_PseU:0 5768 chr1 26149225 26149225 1 + G A rs535584739 26149225 - 26149205 26149245 41 GGAGAGCGAGACCATCCTGGCTAACACAGTGAAGCCCTGTC GGAGAGCGAGACCATCCTGGTTAACACAGTGAAGCCCTGTC Direct Gain 0 0.948439577667155 0 0.248947739601135 prediction 0.89687915533431 Functional Gain - LOC646471 ENSG00000117640 UTR5 Human protein_coding chr1:26149225 chr1:26149225 . . 0 21 hPsi_associated_SNPs_106808 0 0 0 0 0 unknown 0 0.438708051719918 0 0 hPsi_site_5768 iPseU_CNN:0;iRNA_PseU:0 5769 chr18 8633188 8633188 1 + G T LIHC 8633188 + 8633168 8633208 41 TTTGGCTGCTTTTTCTTAGGGACACAGCAGGTCAGGAGAGA TTTGGCTGCTTTTTCTTAGGTACACAGCAGGTCAGGAGAGA Direct Gain 0 0.948434277724909 0 0.318967044353485 prediction 0.896868555449818 Functional Gain - RAB12 ENSG00000206418 CDS Human protein_coding chr18:8633188 chr18:8633188 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106809 0 0 1 0 1 Ribosome 0 0.438718576598331 0 0 hPsi_site_5769 iPseU_CNN:0;iRNA_PseU:0 5770 chr2 32756613 32756613 1 + C A UCEC 32756613 - 32756593 32756633 41 GAAATCTTATCTTACCTGTTGAATTACTTCTGGATATAGCA GAAATCTTATCTTACCTGTTTAATTACTTCTGGATATAGCA Direct Gain 0 0.948432198168065 0 0.0438902080059052 prediction 0.896864396336129 Functional Gain - BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32756613 chr2:32756613 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_106810 0 0 0 0 0 Nucleus 0 0.438718592153597 0 0 hPsi_site_5770 iPseU_CNN:0;iRNA_PseU:0 5771 chr6 43166498 43166498 1 + C T LUAD 43166498 + 43166478 43166518 41 GGTGCCGTGAGGCCCCTCCTCAAGCGCCTCCAGCAGGAGAC GGTGCCGTGAGGCCCCTCCTTAAGCGCCTCCAGCAGGAGAC Direct Gain 0 0.948427089440297 0 0.992920756340027 prediction 0.896854178880594 Functional Gain - CUL9 ENSG00000112659 CDS Human protein_coding chr6:43166498 chr6:43166498 synonymous SNV . 0 21 hPsi_associated_SNPs_106811 0 0 1 0 1 chromatin 0 0.43871402542958 0.985841512680054 0 hPsi_site_5771 iPseU_CNN:0.985841512680054;iRNA_PseU:0 5772 chr15 68583346 68583346 1 + G A LUSC 68583346 - 68583326 68583366 41 ATGATGATGGAGTGCAAGGTCAAAAAATCACTGATGGGCCT ATGATGATGGAGTGCAAGGTTAAAAAATCACTGATGGGCCT Direct Gain 0 0.948418977873419 0 0.261261641979218 prediction 0.896837955746839 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583346 chr15:68583346 synonymous SNV . 0 21 hPsi_associated_SNPs_106812 0 0 0 0 0 Ribosome 0 0.438921892463537 0 0 hPsi_site_5772 iPseU_CNN:0;iRNA_PseU:0 5773 chr11 123893749 123893749 1 + C T SKCM 123893749 + 123893729 123893769 41 ACCAGCCTCGTGACAGCGTTCATCCTCACGGGCCTTCCCCA ACCAGCCTCGTGACAGCGTTTATCCTCACGGGCCTTCCCCA Direct Gain 0 0.948411794903692 0 0.998212933540344 prediction 0.896823589807384 Functional Gain - OR10G9 ENSG00000236981 CDS Human protein_coding chr11:123893749 chr11:123893749 synonymous SNV . 0 21 hPsi_associated_SNPs_106813 0 0 0 0 0 unknown 0 0.438718827414536 0.996425867080688 0 hPsi_site_5773 iPseU_CNN:0.996425867080688;iRNA_PseU:0 5774 chr12 57920900 57920900 1 + G T UCEC 57920900 + 57920880 57920920 41 AGCCATTTTCAGGCTTGGGAGACCTGTCCCCCCTACTTTTC AGCCATTTTCAGGCTTGGGATACCTGTCCCCCCTACTTTTC Direct Gain 0 0.94840752719779 0 0.998756170272827 prediction 0.896815054395581 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920900 chr12:57920900 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106814 0 0 1 1 0 chromatin 0 0.438718592992509 0.997512340545654 0 hPsi_site_5774 iPseU_CNN:0.997512340545654;iRNA_PseU:0 5775 chr20 30605875 30605875 1 + G A SKCM 30605875 - 30605855 30605895 41 GATTCGCAGAATGAGCTCTTCATTGTCGCGCCAGGTGAGCA GATTCGCAGAATGAGCTCTTTATTGTCGCGCCAGGTGAGCA Direct Gain 0 0.948399795238393 0 0.355843961238861 prediction 0.896799590476786 Functional Gain - CCM2L ENSG00000101331 CDS Human protein_coding chr20:30605875 chr20:30605875 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_106815 0 0 0 0 0 exosome 0 0.438649888264871 0 0 hPsi_site_5775 iPseU_CNN:0;iRNA_PseU:0 5776 chr22 23063594 23063594 1 + G A HNSC 23063594 - 23063574 23063614 41 GTTACAGTAATAGTCAGCCTCATCTTCCGCCTGAGCCCCAG GTTACAGTAATAGTCAGCCTTATCTTCCGCCTGAGCCCCAG Direct Gain 0 0.948394650668317 0 0.999970495700836 prediction 0.896789301336635 Functional Gain - GGTLC2;MIR650 ENSG00000211663 CDS Human IG_V_gene chr22:23063594 chr22:23063594 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106816 0 0 0 0 0 unknown 0 0.438718677867644 0.999940991401672 0 hPsi_site_5776 iPseU_CNN:0.999940991401672;iRNA_PseU:0 5777 chr2 44531327 44531327 1 + G T COAD 44531327 + 44531307 44531347 41 GAGAGTATTGACAGGACCGTGATGTACTATGGATTGCCATT GAGAGTATTGACAGGACCGTTATGTACTATGGATTGCCATT Direct Gain 0 0.948392753579367 0 0.905083537101746 prediction 0.896785507158734 Functional Gain - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44531327 chr2:44531327 synonymous SNV . 0 21 hPsi_associated_SNPs_106817 0 0 0 0 1 exosome 0 0.437615021952243 0.810167074203492 0 hPsi_site_5777 iPseU_CNN:0.810167074203492;iRNA_PseU:0 5778 chr8 55371779 55371779 1 + C T COAD 55371779 + 55371759 55371799 41 GGGTGGAGGGCGGCTTCCTGCACGGCCTGGCTGAGCCGCAG GGGTGGAGGGCGGCTTCCTGTACGGCCTGGCTGAGCCGCAG Direct Gain 0 0.948389637024046 0 0.731145441532135 prediction 0.896779274048093 Functional Gain - SOX17 ENSG00000164736 CDS Human protein_coding chr8:55371779 chr8:55371779 nonsynonymous SNV 0.979 4 21 hPsi_associated_SNPs_106818 0 0 0 0 0 Cytosol 0 0.438724261887501 0.46229088306427 0 hPsi_site_5778 iPseU_CNN:0.46229088306427;iRNA_PseU:0 5779 chr1 198723408 198723408 1 + C A LUSC 198723408 - 198723388 198723428 41 ACAAAATATTCCCGTTTGCTGAGATCCATCCCTATAAAAGA ACAAAATATTCCCGTTTGCTTAGATCCATCCCTATAAAAGA Direct Gain 0 0.948386572173947 0 0.750713884830475 prediction 0.896773144347894 Functional Gain - PTPRC ENSG00000081237 CDS Human protein_coding chr1:198723408 chr1:198723408 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_106819 0 0 0 0 0 Ribosome 0 0.438718593004067 0.50142776966095 0 hPsi_site_5779 iPseU_CNN:0.50142776966095;iRNA_PseU:0 5780 chr12 5153943 5153943 1 + G A OV 5153943 - 5153923 5153963 41 TCATCCTCGCGGAAGCGCTCCATGGCCTCGTCCCCCAGCTG TCATCCTCGCGGAAGCGCTCTATGGCCTCGTCCCCCAGCTG Direct Gain 0 0.948386447193591 0 0.976293087005615 prediction 0.896772894387182 Functional Gain - KCNA5 ENSG00000130037 CDS Human protein_coding chr12:5153943 chr12:5153943 nonsynonymous SNV 0.935 0 21 hPsi_associated_SNPs_106820 0 0 0 0 0 exosome 0 0.43847117467999 0.95258617401123 0 hPsi_site_5780 iPseU_CNN:0.95258617401123;iRNA_PseU:0 5781 chr12 657232 657232 1 + G A KIRC 657232 - 657212 657252 41 TCGGTGCCCTCCTCATTCTGCTTGTGCAGCACCTCGAAGTA TCGGTGCCCTCCTCATTCTGTTTGTGCAGCACCTCGAAGTA Direct Gain 0 0.948386311285676 0 0.999840080738068 prediction 0.896772622571351 Functional Gain - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:657232 chr12:657232 synonymous SNV . 0 21 hPsi_associated_SNPs_106821 0 0 0 0 0 exosome 0 0.438508185650198 0.999680161476136 0 hPsi_site_5781 iPseU_CNN:0.999680161476136;iRNA_PseU:0 5782 chr11 5730393 5730393 1 + G T STAD 5730393 + 5730373 5730413 41 TTAAGAATTCAAATCCATGTGATTTTTCTGCTTTTGGTGTC TTAAGAATTCAAATCCATGTTATTTTTCTGCTTTTGGTGTC Direct Gain 0 0.948380017390021 0 0.666498184204102 prediction 0.896760034780041 Functional Gain - TRIM22 ENSG00000132274 CDS Human protein_coding chr11:5730393 chr11:5730393 nonsynonymous SNV 0.003 3 21 hPsi_associated_SNPs_106822 0 0 1 0 0 Cytosol 0 0.438718557867049 0.332996368408204 0 hPsi_site_5782 iPseU_CNN:0.332996368408204;iRNA_PseU:0 5783 chr15 55647133 55647133 1 + C T LUAD 55647133 + 55647113 55647153 41 TAGAGAGTTTCATGATGATGCATCATTGCCTACTCACTTGA TAGAGAGTTTCATGATGATGTATCATTGCCTACTCACTTGA Direct Gain 0 0.948378210587734 0 0.962977409362793 prediction 0.896756421175467 Functional Gain - PIGB ENSG00000069943 CDS Human protein_coding chr15:55647133 chr15:55647133 nonsynonymous SNV 0.008 0 21 hPsi_associated_SNPs_106823 0 0 0 0 1 Endoplasmic reticulum 0 0.436596323358862 0.925954818725586 0 hPsi_site_5783 iPseU_CNN:0.925954818725586;iRNA_PseU:0 5784 chr1 22928138 22928138 1 + C T rs150964144 22928138 + 22928118 22928158 41 AGGGACGTGCGCGCCCTGGGCATCACCCTCATGGGCCACCA AGGGACGTGCGCGCCCTGGGTATCACCCTCATGGGCCACCA Direct Gain 0 0.948376946443967 0 0.999322772026062 prediction 0.896753892887933 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22928138 chr1:22928138 synonymous SNV . 0 21 hPsi_associated_SNPs_106824 0 0 0 0 1 exosome 0 0.438729924754788 0.998645544052124 0 hPsi_site_5784 iPseU_CNN:0.998645544052124;iRNA_PseU:0 5785 chr8 125464363 125464363 1 + G A STAD 125464363 - 125464343 125464383 41 AGTGGCGATTCGAGTTTCTGCAGATTCTGCCCACCTTTGCC AGTGGCGATTCGAGTTTCTGTAGATTCTGCCCACCTTTGCC Direct Gain 0 0.948375295038416 0 0.999933242797852 prediction 0.896750590076833 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125464363 chr8:125464363 nonsynonymous SNV 0.987 0 21 hPsi_associated_SNPs_106825 0 0 0 0 0 Cytosol 0 0.43871858935211 0.999866485595704 0 hPsi_site_5785 iPseU_CNN:0.999866485595704;iRNA_PseU:0 5786 chr10 99327681 99327681 1 + G A PAAD 99327681 - 99327661 99327701 41 AGCCGCTCTTTCTTCAGGGGCTCATTGCGTCCTGGGCAGGA AGCCGCTCTTTCTTCAGGGGTTCATTGCGTCCTGGGCAGGA Direct Gain 0 0.948371844212829 0 0.998776912689209 prediction 0.896743688425659 Functional Gain - UBTD1 ENSG00000165886 CDS Human protein_coding chr10:99327681 chr10:99327681 synonymous SNV . 0 21 hPsi_associated_SNPs_106826 0 0 0 0 0 Cytosol 0 0.438721980601525 0.997553825378418 0 hPsi_site_5786 iPseU_CNN:0.997553825378418;iRNA_PseU:0 5787 chr16 31309153 31309153 1 + G T LUSC 31309153 + 31309133 31309173 41 CAGCCCTAACAGTGCTGGGGGACGTAAATGGGGACAAGCTG CAGCCCTAACAGTGCTGGGGTACGTAAATGGGGACAAGCTG Direct Gain 0 0.948370473834341 0 0.999525725841522 prediction 0.896740947668682 Functional Gain - ITGAM ENSG00000169896 CDS Human protein_coding chr16:31309153 chr16:31309153 nonsynonymous SNV 0.987 4 21 hPsi_associated_SNPs_106827 0 0 0 0 2 Endoplasmic reticulum 0 0.438718592794919 0.999051451683044 0 hPsi_site_5787 iPseU_CNN:0.999051451683044;iRNA_PseU:0 5788 chr1 40961697 40961697 1 + T A LUSC 40961697 - 40961677 40961717 41 GGAAGGCGTTCCTCCTGTGTATTTCATGATGTCGACTAAGT GGAAGGCGTTCCTCCTGTGTTTTTCATGATGTCGACTAAGT Direct Gain 0 0.948366340451028 0 0.212870091199875 prediction 0.896732680902056 Functional Gain - ZFP69 ENSG00000187815 CDS Human protein_coding chr1:40961697 chr1:40961697 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106828 0 0 0 0 0 insoluble cytoplasm 0 0.438724960153381 0 0 hPsi_site_5788 iPseU_CNN:0;iRNA_PseU:0 5789 chr1 3321352 3321352 1 + G A SKCM 3321352 - 3321332 3321372 41 GAAGGCCTTGGGACACTGGTCGCATTTGTACTCGCGCTCCT GAAGGCCTTGGGACACTGGTTGCATTTGTACTCGCGCTCCT Direct Gain 0 0.948366251996942 0 0.999442338943481 prediction 0.896732503993884 Functional Gain - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3321352 chr1:3321352 nonsynonymous SNV 0.927 2 21 hPsi_associated_SNPs_106829 0 0 0 0 0 Nucleus 0 0.438511031306606 0.998884677886962 0 hPsi_site_5789 iPseU_CNN:0.998884677886962;iRNA_PseU:0 5790 chr18 63489321 63489321 1 + C T LUSC 63489321 + 63489301 63489341 41 ATTTGAAATTTTACAGGAGTCATCAAGACTGCCCTTCCAAA ATTTGAAATTTTACAGGAGTTATCAAGACTGCCCTTCCAAA Direct Gain 0 0.948364018641883 0 0.98986291885376 prediction 0.896728037283767 Functional Gain - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63489321 chr18:63489321 synonymous SNV . 0 21 hPsi_associated_SNPs_106830 0 0 0 0 1 exosome 0 0.438697639816169 0.97972583770752 0 hPsi_site_5790 iPseU_CNN:0.97972583770752;iRNA_PseU:0 5791 chr13 71742342 71742342 1 + A T rs528033625 71742342 + 71742322 71742362 41 GAAAGATGACAAGGAAATCTAATCTGCTGAGTTATACTAAA GAAAGATGACAAGGAAATCTTATCTGCTGAGTTATACTAAA Direct Gain 0 0.948357896425428 0 0.999786615371704 prediction 0.896715792850857 Functional Gain - LINC00348 ENSG00000226846 ncRNA_exonic Human lincRNA chr13:71742342 chr13:71742342 . . 0 21 hPsi_associated_SNPs_106831 0 0 0 0 0 unknown 0 0.438718549527437 0.999573230743408 0 hPsi_site_5791 iPseU_CNN:0.999573230743408;iRNA_PseU:0 5792 chr7 141352646 141352646 1 + G A OV 141352646 - 141352626 141352666 41 AGCTTCCTGGGGAGCAGTTTCACCTCCACAGGCATCGCTTC AGCTTCCTGGGGAGCAGTTTTACCTCCACAGGCATCGCTTC Direct Gain 0 0.948357485025059 0 0.999819934368134 prediction 0.896714970050118 Functional Gain - AGK ENSG00000006530 CDS Human protein_coding chr7:141352646 chr7:141352646 synonymous SNV . 0 21 hPsi_associated_SNPs_106832 0 0 1 0 0 Cytosol 0 0.438661144066194 0.999639868736268 0 hPsi_site_5792 iPseU_CNN:0.999639868736268;iRNA_PseU:0 5793 chrX 51638306 51638306 1 + C T rs782818810 51638306 + 51638286 51638326 41 GATGGCTGACATTCAGGTTTCAGCAGCTGCCGCTAGGCCTA GATGGCTGACATTCAGGTTTTAGCAGCTGCCGCTAGGCCTA Direct Gain 0 0.948349421457169 0 0.953192710876465 prediction 0.896698842914339 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638306 chrX:51638306 nonsynonymous SNV 0.028 0 21 hPsi_associated_SNPs_106833 0 0 1 0 0 chromatin 0 0.438718594700559 0.90638542175293 0 hPsi_site_5793 iPseU_CNN:0.90638542175293;iRNA_PseU:0 5794 chr19 55107847 55107847 1 + G A SKCM 55107847 - 55107827 55107867 41 TGGGCTGAGGTCACAGGACTCATAGGGAATTCAGCCTGGTA TGGGCTGAGGTCACAGGACTTATAGGGAATTCAGCCTGGTA Direct Gain 0 0.948349130934126 0 0.799646198749542 prediction 0.896698261868252 Functional Gain - LILRA1 ENSG00000104974 CDS Human protein_coding chr19:55107847 chr19:55107847 nonsynonymous SNV 0.004 0 21 hPsi_associated_SNPs_106834 0 0 0 0 0 exosome 0 0.438718361106896 0.599292397499084 0 hPsi_site_5794 iPseU_CNN:0.599292397499084;iRNA_PseU:0 5795 chr1 104116384 104116384 1 + G A LUSC 104116384 - 104116364 104116404 41 TTCGGCAATCTTGGAACGCACATAATCTTTCTCCAGTGCAA TTCGGCAATCTTGGAACGCATATAATCTTTCTCCAGTGCAA Direct Gain 0 0.948348343573115 0 0.947274208068848 prediction 0.89669668714623 Functional Gain - AMY2B ENSG00000240038 CDS Human protein_coding chr1:104116384 chr1:104116384 nonsynonymous SNV 0.942 5 21 hPsi_associated_SNPs_106835 0 0 0 0 0 exosome 0 0.438718597722511 0.894548416137696 0 hPsi_site_5795 iPseU_CNN:0.894548416137696;iRNA_PseU:0 5796 chr15 85448797 85448797 1 + C T UCEC 85448797 + 85448777 85448817 41 GGAGGGCCGTGTCTTGGGGACTTGGACTGCAGTTTGTACTT GGAGGGCCGTGTCTTGGGGATTTGGACTGCAGTTTGTACTT Direct Gain 0 0.948348053246752 0 0.00196486711502075 prediction 0.896696106493505 Functional Gain - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85448797 chr15:85448797 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_106836 0 0 0 0 2 Endoplasmic reticulum 0 0.438719014917617 0 0 hPsi_site_5796 iPseU_CNN:0;iRNA_PseU:0 5797 chr13 103544807 103544807 1 + C T ESCA 103544807 + 103544787 103544827 41 AGTACACACATGAGTACTCTCATGTACTCATATGAGCACGC AGTACACACATGAGTACTCTTATGTACTCATATGAGCACGC Direct Gain 0 0.948347869218391 0 2.89082527160645e-05 prediction 0.896695738436782 Functional Gain - METTL21EP ENSG00000250878 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr13:103544807 chr13:103544807 . . 0 21 hPsi_associated_SNPs_106837 0 0 0 0 0 unknown 0 0.438828575524492 0 0 hPsi_site_5797 iPseU_CNN:0;iRNA_PseU:0 5798 chr7 100732123 100732123 1 + C T CESC 100732123 + 100732103 100732143 41 GACAAGCGGTCCCCCCGGATCACCGGGCTCTGTCCCTTCGG GACAAGCGGTCCCCCCGGATTACCGGGCTCTGTCCCTTCGG Direct Gain 0 0.948346576248701 0 0.997441232204437 prediction 0.896693152497402 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732123 chr7:100732123 synonymous SNV . 0 21 hPsi_associated_SNPs_106838 0 0 1 0 0 nucleus 0 0.438718760239234 0.994882464408874 0 hPsi_site_5798 iPseU_CNN:0.994882464408874;iRNA_PseU:0 5799 chr11 55579651 55579651 1 + G A SARC 55579651 - 55579631 55579671 41 GGAAGCACAGGTGGAGAAGGCTTTGTGCCTGCCCTCTGCAG GGAAGCACAGGTGGAGAAGGTTTTGTGCCTGCCCTCTGCAG Direct Gain 0 0.948346084342133 0 0.983487844467163 prediction 0.896692168684265 Functional Gain - OR5L1 ENSG00000186117 CDS Human other chr11:55579651 chr11:55579651 nonsynonymous SNV 0.416 1 21 hPsi_associated_SNPs_106839 0 0 0 0 0 unknown 0 0.438718592972734 0.966975688934326 0 hPsi_site_5799 iPseU_CNN:0.966975688934326;iRNA_PseU:0 5800 chr11 61607868 61607868 1 + G A SKCM 61607868 - 61607848 61607888 41 AGGAAGAACACGTGGTTGGTCTTGAACAGGTTCATGTCCTC AGGAAGAACACGTGGTTGGTTTTGAACAGGTTCATGTCCTC Direct Gain 0 0.948343392251863 0 0.999999046325684 prediction 0.896686784503726 Functional Gain - FADS2 ENSG00000134824 CDS Human protein_coding chr11:61607868 chr11:61607868 synonymous SNV . 0 21 hPsi_associated_SNPs_106840 0 0 0 0 0 Ribosome 0 0.439362788759093 0.999998092651368 0 hPsi_site_5800 iPseU_CNN:0.999998092651368;iRNA_PseU:0 5801 chr10 51585393 51585393 1 + C T SARC 51585393 + 51585373 51585413 41 ACAGCCCCTTGTCGGAGTGGCTTATCAGGCCCCCATACAAA ACAGCCCCTTGTCGGAGTGGTTTATCAGGCCCCCATACAAA Direct Gain 0 0.948342219266456 0 0.56643933057785 prediction 0.896684438532912 Functional Gain - NCOA4 ENSG00000138293 CDS Human other chr10:51585393 chr10:51585393 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106841 0 0 1 0 0 Cytosol 0 0.438724877435499 0.1328786611557 0 hPsi_site_5801 iPseU_CNN:0.1328786611557;iRNA_PseU:0 5802 chr19 6187624 6187624 1 + G T UCEC 6187624 + 6187604 6187644 41 GGGCAGTGTGAGATGAATCAGATGAGCGGAGAACCTCTGGA GGGCAGTGTGAGATGAATCATATGAGCGGAGAACCTCTGGA Direct Gain 0 0.948339533612774 0 0.977973818778992 prediction 0.896679067225547 Functional Gain - ACSBG2 ENSG00000130377 CDS Human protein_coding chr19:6187624 chr19:6187624 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106842 0 0 0 0 0 exosome 0 0.436865053404938 0.955947637557984 0 hPsi_site_5802 iPseU_CNN:0.955947637557984;iRNA_PseU:0 5803 chr15 20362850 20362850 1 + T A LIHC 20362850 - 20362830 20362870 41 AAAAGGACCCACCTGCACGTATCCAACATTTCCCTCGCTGT AAAAGGACCCACCTGCACGTTTCCAACATTTCCCTCGCTGT Direct Gain 0 0.948337878916456 0 0.999999165534973 prediction 0.896675757832913 Functional Gain - NONE;CHEK2P2 ENSG00000258780 ncRNA_exonic Human unprocessed_pseudogene chr15:20362850 chr15:20362850 . . 0 21 hPsi_associated_SNPs_106843 0 0 0 0 0 unknown 0 0.438713045610517 0.999998331069946 0 hPsi_site_5803 iPseU_CNN:0.999998331069946;iRNA_PseU:0 5804 chr2 160035546 160035546 1 + G T BLCA 160035546 + 160035526 160035566 41 TGGGAAGACTTTCAGCAGAGGATGGACGCCCTCTCCTGCTT TGGGAAGACTTTCAGCAGAGTATGGACGCCCTCTCCTGCTT Direct Gain 0 0.948331674591436 0 0.999899208545685 prediction 0.896663349182871 Functional Gain - TANC1 ENSG00000115183 CDS Human protein_coding chr2:160035546 chr2:160035546 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_106844 0 0 0 0 0 Nucleus 0 0.438686937616801 0.99979841709137 0 hPsi_site_5804 iPseU_CNN:0.99979841709137;iRNA_PseU:0 5805 chr1 228492251 228492251 1 + C T SKCM 228492251 + 228492231 228492271 41 GGGCAGGAGAGGACCTCAGCCACACTCACGATCAGGGGTAA GGGCAGGAGAGGACCTCAGCTACACTCACGATCAGGGGTAA Direct Gain 0 0.948320221214735 0 0.99931138753891 prediction 0.89664044242947 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228492251 chr1:228492251 synonymous SNV . 0 21 hPsi_associated_SNPs_106845 0 0 0 0 1 Ribosome 0 0.438527578187468 0.99862277507782 0 hPsi_site_5805 iPseU_CNN:0.99862277507782;iRNA_PseU:0 5806 chr20 47839910 47839910 1 + G A BLCA 47839910 - 47839890 47839930 41 AGTCTCCGAGGCTTCATCTTCTGAGCCTTCCTCATCATTCT AGTCTCCGAGGCTTCATCTTTTGAGCCTTCCTCATCATTCT Direct Gain 0 0.948319670175472 0 0.611183404922485 prediction 0.896639340350944 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47839910 chr20:47839910 nonsynonymous SNV 0.016 0 21 hPsi_associated_SNPs_106846 0 0 0 0 0 chromatin 0 0.438715978397684 0.22236680984497 0 hPsi_site_5806 iPseU_CNN:0.22236680984497;iRNA_PseU:0 5807 chr11 48238706 48238706 1 + G T LUAD 48238706 + 48238686 48238726 41 GAGATCCTTTTGATTGTGGTGATGGCCTATGATTGCTACGT GAGATCCTTTTGATTGTGGTTATGGCCTATGATTGCTACGT Direct Gain 0 0.948318623837988 0 0.217942446470261 prediction 0.896637247675976 Functional Gain - OR4B1 ENSG00000175619 CDS Human protein_coding chr11:48238706 chr11:48238706 synonymous SNV . 0 21 hPsi_associated_SNPs_106847 0 0 0 0 0 unknown 0 0.438718749567682 0 0 hPsi_site_5807 iPseU_CNN:0;iRNA_PseU:0 5808 chr7 140398056 140398056 1 + G T SARC 140398056 + 140398036 140398076 41 TGAGGAGATGGGGGAATGCCGATCTTCCCTGAGGTGCTGGC TGAGGAGATGGGGGAATGCCTATCTTCCCTGAGGTGCTGGC Direct Gain 0 0.948311828309718 0 0.0150722861289978 prediction 0.896623656619435 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140398056 chr7:140398056 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106848 0 0 1 0 1 Ribosome 0 0.43871859299587 0 0 hPsi_site_5808 iPseU_CNN:0;iRNA_PseU:0 5809 chr7 128852198 128852198 1 + C T UCEC 128852198 + 128852178 128852218 41 CAGTGCACCGGCCCCCGTGGCATGGGCTCATGGCCGCCGAC CAGTGCACCGGCCCCCGTGGTATGGGCTCATGGCCGCCGAC Direct Gain 0 0.94831163052207 0 0.998943865299225 prediction 0.896623261044139 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128852198 chr7:128852198 nonsynonymous SNV 0.190 0 21 hPsi_associated_SNPs_106849 0 0 1 0 0 cytosol 0 0.438560130980647 0.99788773059845 0 hPsi_site_5809 iPseU_CNN:0.99788773059845;iRNA_PseU:0 5810 chr1 232162223 232162223 1 + G A UCEC 232162223 - 232162203 232162243 41 CAATAGCTTCTTGCCTATGTCTTCACACTTTTCTCCAAGTT CAATAGCTTCTTGCCTATGTTTTCACACTTTTCTCCAAGTT Direct Gain 0 0.948304385800031 0 0.964995503425598 prediction 0.896608771600061 Functional Gain - DISC1 ENSG00000162946 CDS Human protein_coding chr1:232162223 chr1:232162223 nonsynonymous SNV 0.895 0 21 hPsi_associated_SNPs_106850 0 0 0 0 0 Nucleus 0 0.438718486556869 0.929991006851196 0 hPsi_site_5810 iPseU_CNN:0.929991006851196;iRNA_PseU:0 5811 chr5 140579673 140579673 1 + T A STAD 140579673 - 140579653 140579693 41 ACTGCGTGGGGTTTTGCATTAACACCTGCAAATGTAGCACG ACTGCGTGGGGTTTTGCATTTACACCTGCAAATGTAGCACG Direct Gain 0 0.948303330958013 0 0.912705540657043 prediction 0.896606661916026 Functional Gain - PCDHB11 ENSG00000197479 CDS Human protein_coding chr5:140579673 chr5:140579673 stopgain 0.008 0 21 hPsi_associated_SNPs_106851 0 0 0 0 0 Nucleus 0 0.444491351822658 0.825411081314086 0 hPsi_site_5811 iPseU_CNN:0.825411081314086;iRNA_PseU:0 5812 chr18 59212293 59212293 1 + G T UCEC 59212293 + 59212273 59212313 41 TGAGTGCGGTGGACCAAGATGACCCACGCAATGGTCAGCAT TGAGTGCGGTGGACCAAGATTACCCACGCAATGGTCAGCAT Direct Gain 0 0.94830223776781 0 0.999742150306702 prediction 0.896604475535619 Functional Gain - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59212293 chr18:59212293 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106852 0 0 0 0 2 nucleus 0 0.438688298773795 0.999484300613404 0 hPsi_site_5812 iPseU_CNN:0.999484300613404;iRNA_PseU:0 5813 chr20 5843987 5843987 1 + G T GBM 5843987 + 5843967 5844007 41 TCTTACAGAGGCATTCCAGGGACACCCACTTCTACCCACTG TCTTACAGAGGCATTCCAGGTACACCCACTTCTACCCACTG Direct Gain 0 0.948299137197826 0 0.999992370605469 prediction 0.896598274395651 Functional Gain - C20orf196 ENSG00000171984 CDS Human protein_coding chr20:5843987 chr20:5843987 nonsynonymous SNV 0.002 3 21 hPsi_associated_SNPs_106853 0 0 0 0 0 Cytosol 0 0.438699845908122 0.999984741210938 0 hPsi_site_5813 iPseU_CNN:0.999984741210938;iRNA_PseU:0 5814 chr11 62434253 62434253 1 + G A HNSC 62434253 - 62434233 62434273 41 TGGAAAGAGCCTGAAGAAGCCACAGCCCCCAGGTTCTGAGC TGGAAAGAGCCTGAAGAAGCTACAGCCCCCAGGTTCTGAGC Direct Gain 0 0.948292746128084 0 0.998504281044006 prediction 0.896585492256167 Functional Gain - METTL12 ENSG00000214756 CDS Human protein_coding chr11:62434253 chr11:62434253 synonymous SNV . 0 21 hPsi_associated_SNPs_106854 0 0 1 0 0 Cytosol 0 0.438718591334652 0.997008562088012 0 hPsi_site_5814 iPseU_CNN:0.997008562088012;iRNA_PseU:0 5815 chr19 47844720 47844720 1 + G A rs138219631 47844720 - 47844700 47844740 41 GGCTGCCCAGCACAGGAGGGCACTGTGGCAGCTGGCCACGG GGCTGCCCAGCACAGGAGGGTACTGTGGCAGCTGGCCACGG Direct Gain 0 0.94829193039836 0 0.992966532707214 prediction 0.89658386079672 Functional Gain - C5AR2 ENSG00000134830 CDS Human protein_coding chr19:47844720 chr19:47844720 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106855 0 0 0 0 0 exosome 0 0.438718606096004 0.985933065414428 0 hPsi_site_5815 iPseU_CNN:0.985933065414428;iRNA_PseU:0 5816 chr11 59838341 59838341 1 + G A rs368642032 59838341 - 59838321 59838361 41 CTTTGAAGAACACATTTGGGCTTGCTCTCAGACTCGCCAAC CTTTGAAGAACACATTTGGGTTTGCTCTCAGACTCGCCAAC Direct Gain 0 0.948284619835258 0 0.999997556209564 prediction 0.896569239670516 Functional Gain - MS4A3 ENSG00000149516 UTR3 Human protein_coding chr11:59838341 chr11:59838341 . . 0 21 hPsi_associated_SNPs_106856 0 0 0 0 0 exosome 0 0.438710011412309 0.999995112419128 0 hPsi_site_5816 iPseU_CNN:0.999995112419128;iRNA_PseU:0 5817 chrX 151870148 151870148 1 + G T LUSC 151870148 + 151870128 151870168 41 GGGGTCCAAGGGCCCTCATTGAAACCAGCTATGTGAAAGTC GGGGTCCAAGGGCCCTCATTTAAACCAGCTATGTGAAAGTC Direct Gain 0 0.948278509877294 0 0.648176491260529 prediction 0.896557019754588 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870148 chrX:151870148 stopgain 0.037 0 21 hPsi_associated_SNPs_106857 0 0 0 0 0 Ribosome 0 0.438718389479232 0.296352982521058 0 hPsi_site_5817 iPseU_CNN:0.296352982521058;iRNA_PseU:0 5818 chr12 62931458 62931458 1 + C A LUSC 62931458 - 62931438 62931478 41 TTGCCAAGACAAGTTGCCATGATGTTCCAAGAACAGCCCCA TTGCCAAGACAAGTTGCCATTATGTTCCAAGAACAGCCCCA Direct Gain 0 0.948269212103833 0 0.720131516456604 prediction 0.896538424207665 Functional Gain - MON2 ENSG00000061987 CDS Human protein_coding chr12:62931458 chr12:62931458 stopgain 0.997 1 21 hPsi_associated_SNPs_106858 0 0 0 0 0 Nucleus 0 0.438582686959245 0.440263032913208 0 hPsi_site_5818 iPseU_CNN:0.440263032913208;iRNA_PseU:0 5819 chrX 119048716 119048716 1 + G A BLCA 119048716 - 119048696 119048736 41 GAGGAAGCTGTGAATTAAGTCTTTCCTCTCTACAAACTCTA GAGGAAGCTGTGAATTAAGTTTTTCCTCTCTACAAACTCTA Direct Gain 0 0.948263637832894 0 0.412229239940643 prediction 0.896527275665788 Functional Gain - AKAP14 ENSG00000186471 CDS Human protein_coding chrX:119048716 chrX:119048716 nonsynonymous SNV 0.587 3 21 hPsi_associated_SNPs_106859 0 0 0 0 0 unknown 0 0.436640896241122 0 0 hPsi_site_5819 iPseU_CNN:0;iRNA_PseU:0 5820 chr12 6436606 6436606 1 + C T BLCA 6436606 + 6436586 6436626 41 CTTCGGCGGGACCCTCGCCTCACCTTCTCCACCCTGGAACT CTTCGGCGGGACCCTCGCCTTACCTTCTCCACCCTGGAACT Direct Gain 0 0.948256078794537 0 0.946231603622437 prediction 0.896512157589074 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6436606 chr12:6436606 synonymous SNV . 0 21 hPsi_associated_SNPs_106860 0 0 0 0 0 Nucleus 0 0.438718567482688 0.892463207244874 0 hPsi_site_5820 iPseU_CNN:0.892463207244874;iRNA_PseU:0 5821 chr14 71462636 71462636 1 + G A SKCM 71462636 - 71462616 71462656 41 TAAGGCCTGCATACCAAGTTCATCGTGCAAACTGCTACCGC TAAGGCCTGCATACCAAGTTTATCGTGCAAACTGCTACCGC Direct Gain 0 0.94825442211745 0 0.993641257286072 prediction 0.8965088442349 Functional Gain - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71462636 chr14:71462636 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106861 0 0 0 0 0 Endoplasmic reticulum 0 0.438720331866143 0.987282514572144 0 hPsi_site_5821 iPseU_CNN:0.987282514572144;iRNA_PseU:0 5822 chrX 13624584 13624584 1 + C T SKCM 13624584 + 13624564 13624604 41 GAAGCTACTACTGCAAATGTCACATTGGTTTCGAACTGCAA GAAGCTACTACTGCAAATGTTACATTGGTTTCGAACTGCAA Direct Gain 0 0.948245657769484 0 0.999999403953552 prediction 0.896491315538969 Functional Gain - EGFL6 ENSG00000198759 CDS Human protein_coding chrX:13624584 chrX:13624584 nonsynonymous SNV 0.927 3 21 hPsi_associated_SNPs_106862 0 0 0 0 2 exosome 0 0.436803070111915 0.999998807907104 0 hPsi_site_5822 iPseU_CNN:0.999998807907104;iRNA_PseU:0 5823 chr15 58001424 58001424 1 + C T rs143723126 58001424 + 58001404 58001444 41 GGACCAAGGTGAACAACAGTCAGAAGAAAACGCAAGTACTA GGACCAAGGTGAACAACAGTTAGAAGAAAACGCAAGTACTA Direct Gain 0 0.948239528991396 0 0.892951250076294 prediction 0.896479057982793 Functional Gain - GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001424 chr15:58001424 nonsynonymous SNV 0.023 0 21 hPsi_associated_SNPs_106863 0 0 0 1 1 unknown 0 0.438769323378951 0.785902500152588 0 hPsi_site_5823 iPseU_CNN:0.785902500152588;iRNA_PseU:0 5824 chr17 78321786 78321786 1 + C T STAD 78321786 + 78321766 78321806 41 AAATACAGCCCCTCTGACGTCTTCATCGGCTACCACTCGGA AAATACAGCCCCTCTGACGTTTTCATCGGCTACCACTCGGA Direct Gain 0 0.948239343536922 0 0.722073256969452 prediction 0.896478687073844 Functional Gain - RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321786 chr17:78321786 synonymous SNV . 0 21 hPsi_associated_SNPs_106864 0 0 1 0 0 Nucleus 0 0.449940280809008 0.444146513938904 0 hPsi_site_5824 iPseU_CNN:0.444146513938904;iRNA_PseU:0 5825 chr11 56143809 56143809 1 + C T LUAD 56143809 + 56143789 56143829 41 AGCTGAGGGAAGACAGAAGGCTTTCTCGACGTGTGGCTCTC AGCTGAGGGAAGACAGAAGGTTTTCTCGACGTGTGGCTCTC Direct Gain 0 0.94823666034764 0 0.967787742614746 prediction 0.89647332069528 Functional Gain - OR8U1;OR8U8 ENSG00000172199 CDS Human protein_coding chr11:56143809 chr11:56143809 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106865 0 0 0 0 0 unknown 0 0.43871887496585 0.935575485229492 0 hPsi_site_5825 iPseU_CNN:0.935575485229492;iRNA_PseU:0 5826 chr17 17068823 17068823 1 + C T rs61740553 17068823 + 17068803 17068843 41 AGGGAGGGCCATCAGCAGGGCACAGCCAAACTCGACCAAGG AGGGAGGGCCATCAGCAGGGTACAGCCAAACTCGACCAAGG Direct Gain 0 0.948236620371277 0 0.986725330352783 prediction 0.896473240742555 Functional Gain - MPRIP ENSG00000133030 CDS Human protein_coding chr17:17068823 chr17:17068823 unknown . 0 21 hPsi_associated_SNPs_106866 0 0 1 0 0 Cytosol 0 0.438718592995413 0.973450660705566 0 hPsi_site_5826 iPseU_CNN:0.973450660705566;iRNA_PseU:0 5827 chr11 22301182 22301182 1 + G A STAD 22301182 - 22301162 22301202 41 TCATGGAGAATCTTGATAGTCATTAACTTTTCTCTCTTGAT TCATGGAGAATCTTGATAGTTATTAACTTTTCTCTCTTGAT Direct Gain 0 0.948235165803173 0 0.999611258506775 prediction 0.896470331606345 Functional Gain - ANO5 ENSG00000171714 CDS Human protein_coding chr11:22301182 chr11:22301182 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106867 0 0 0 0 0 chromatin 0 0.438694709842431 0.99922251701355 0 hPsi_site_5827 iPseU_CNN:0.99922251701355;iRNA_PseU:0 5828 chr19 14029367 14029367 1 + C A STAD 14029367 - 14029347 14029387 41 GGTGGAGGGGGCAGGCAGGAGAGGTCCACGGGCTCACCCCG GGTGGAGGGGGCAGGCAGGATAGGTCCACGGGCTCACCCCG Direct Gain 0 0.948231372717397 0 0.999403059482574 prediction 0.896462745434793 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14029367 chr19:14029367 synonymous SNV . 0 21 hPsi_associated_SNPs_106868 0 0 0 0 0 chromatin 0 0.43869429940987 0.998806118965148 0 hPsi_site_5828 iPseU_CNN:0.998806118965148;iRNA_PseU:0 5829 chr18 14840641 14840641 1 + C A UCEC 14840641 - 14840621 14840661 41 TGTTGTCTTTATTTCTTTTTGATATGTAGCCTCAGGTAAAC TGTTGTCTTTATTTCTTTTTTATATGTAGCCTCAGGTAAAC Direct Gain 0 0.948227364062832 0 0.252580583095551 prediction 0.896454728125663 Functional Gain - ANKRD30B ENSG00000180777 CDS Human protein_coding chr18:14840641 chr18:14840641 nonsynonymous SNV 0.016 1 21 hPsi_associated_SNPs_106869 0 0 0 0 0 exosome 0 0.438757210023365 0 0 hPsi_site_5829 iPseU_CNN:0;iRNA_PseU:0 5830 chr5 140711095 140711095 1 + C T LUSC 140711095 + 140711075 140711115 41 GGGAAGTAACGTACTCCTTTCACAATGTAGACCACAGAGTG GGGAAGTAACGTACTCCTTTTACAATGTAGACCACAGAGTG Direct Gain 0 0.948224156884776 0 0.000442057847976685 prediction 0.896448313769552 Functional Gain - PCDHGA1 ENSG00000204956 CDS Human protein_coding chr5:140711095 chr5:140711095 nonsynonymous SNV 0.998 0 21 hPsi_associated_SNPs_106870 0 0 0 0 0 exosome 0 0.438719131886314 0 0 hPsi_site_5830 iPseU_CNN:0;iRNA_PseU:0 5831 chrX 21990097 21990097 1 + G A CESC 21990097 - 21990077 21990117 41 AAAACCGACACTGTCGATCTCTTCTTTGCCTTGCGCATCAC AAAACCGACACTGTCGATCTTTTCTTTGCCTTGCGCATCAC Direct Gain 0 0.948217391320716 0 0.962855160236359 prediction 0.896434782641432 Functional Gain - SMS ENSG00000102172 CDS Human protein_coding chrX:21990097 chrX:21990097 nonsynonymous SNV 0.973 2 21 hPsi_associated_SNPs_106871 0 0 0 0 0 Ribosome 0 0.438703716023223 0.925710320472718 0 hPsi_site_5831 iPseU_CNN:0.925710320472718;iRNA_PseU:0 5832 chrX 77218426 77218426 1 + A T rs782540240 77218426 + 77218406 77218446 41 CTCTTTGATAGTGACTGTGTAATAATTCATACTTCCTCATA CTCTTTGATAGTGACTGTGTTATAATTCATACTTCCTCATA Direct Gain 0 0.948217113366238 0 0.999974846839905 prediction 0.896434226732476 Functional Gain - ATP7A ENSG00000248503 ncRNA_exonic Human transcribed_processed_pseudogene chrX:77218426 chrX:77218426 . . 0 21 hPsi_associated_SNPs_106872 0 0 1 0 0 Ribosome 0 0.438717250168413 0.99994969367981 0 hPsi_site_5832 iPseU_CNN:0.99994969367981;iRNA_PseU:0 5833 chr2 47184034 47184034 1 + C T UCEC 47184034 + 47184014 47184054 41 AAACTGCATTACGTGGAGGGCTCATACCGAGATGCCATCAG AAACTGCATTACGTGGAGGGTTCATACCGAGATGCCATCAG Direct Gain 0 0.948216604815164 0 0.981101870536804 prediction 0.896433209630329 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47184034 chr2:47184034 synonymous SNV . 0 21 hPsi_associated_SNPs_106873 0 0 1 0 1 Nucleus 0 0.43871859301644 0.962203741073608 0 hPsi_site_5833 iPseU_CNN:0.962203741073608;iRNA_PseU:0 5834 chr19 41063159 41063159 1 + C T ACC 41063159 + 41063139 41063179 41 CGGGAGCTTCATAAGTTCTTCAGTGACGCCCGAGAGCTTCA CGGGAGCTTCATAAGTTCTTTAGTGACGCCCGAGAGCTTCA Direct Gain 0 0.948216471046062 0 0.999938011169434 prediction 0.896432942092123 Functional Gain - SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41063159 chr19:41063159 synonymous SNV . 0 21 hPsi_associated_SNPs_106874 0 0 0 0 0 cytosol 0 0.438718623690255 0.999876022338868 0 hPsi_site_5834 iPseU_CNN:0.999876022338868;iRNA_PseU:0 5835 chr11 63593915 63593915 1 + C A rs73492273 63593915 - 63593895 63593935 41 GGACAGAAAAGACCCCTGGCGAACTTCCACCAGGCTCTTTA GGACAGAAAAGACCCCTGGCTAACTTCCACCAGGCTCTTTA Direct Gain 0 0.94821364184153 0 0.806135296821594 prediction 0.89642728368306 Functional Gain - C11orf84 ENSG00000168005 intronic Human protein_coding chr11:63593915 chr11:63593915 . . 0 21 hPsi_associated_SNPs_106875 0 0 0 0 0 Ribosome 0 0.438718593000706 0.612270593643188 0 hPsi_site_5835 iPseU_CNN:0.612270593643188;iRNA_PseU:0 5836 chr22 38062689 38062689 1 + G A rs60518788 38062689 - 38062669 38062709 41 GAAAGGGTGGGGCTTGGCCACAGAAGCCCCAGAGCATCACA GAAAGGGTGGGGCTTGGCCATAGAAGCCCCAGAGCATCACA Direct Gain 0 0.948203019307977 0 0.831714510917664 prediction 0.896406038615953 Functional Gain - PDXP ENSG00000100092;ENSG00000241360 UTR3 Human other chr22:38062689 chr22:38062689 . . 0 21 hPsi_associated_SNPs_106876 0 0 0 0 0 Ribosome 0 0.438718504664086 0.663429021835328 0 hPsi_site_5836 iPseU_CNN:0.663429021835328;iRNA_PseU:0 5837 chr12 55846129 55846129 1 + C T BLCA 55846129 + 55846109 55846149 41 ACAGGGAACCTGACTATTATCACCCTCACATTGGTGGACCA ACAGGGAACCTGACTATTATTACCCTCACATTGGTGGACCA Direct Gain 0 0.948194837126614 0 0.933739244937897 prediction 0.896389674253228 Functional Gain - OR6C2 ENSG00000179695 CDS Human protein_coding chr12:55846129 chr12:55846129 synonymous SNV . 0 21 hPsi_associated_SNPs_106877 0 0 0 0 0 unknown 0 0.43871938869236 0.867478489875794 0 hPsi_site_5837 iPseU_CNN:0.867478489875794;iRNA_PseU:0 5838 chr1 70705161 70705161 1 + C A LUAD 70705161 - 70705141 70705181 41 TCCTCCTCCTCCTAGAACGTGATCTTGATCTTGAATGCCTT TCCTCCTCCTCCTAGAACGTTATCTTGATCTTGAATGCCTT Direct Gain 0 0.948194376916664 0 0.85905909538269 prediction 0.896388753833328 Functional Gain - SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70705161 chr1:70705161 stopgain 1.000 1 21 hPsi_associated_SNPs_106878 0 0 0 0 0 Nucleus 0 0.438718592922191 0.71811819076538 0 hPsi_site_5838 iPseU_CNN:0.71811819076538;iRNA_PseU:0 5839 chr7 149512416 149512416 1 + G A UCEC 149512416 - 149512396 149512436 41 GGCAGTGGGCTGGGGGCACGCACAGCCCGTCCTGGGAGAGC GGCAGTGGGCTGGGGGCACGTACAGCCCGTCCTGGGAGAGC Direct Gain 0 0.948193585996765 0 0.99967086315155 prediction 0.89638717199353 Functional Gain - SSPO ENSG00000197558 ncRNA_exonic Human protein_coding chr7:149512416 chr7:149512416 . 0.433 2 21 hPsi_associated_SNPs_106879 0 0 0 0 0 chromatin 0 0.438730524809272 0.9993417263031 0 hPsi_site_5839 iPseU_CNN:0.9993417263031;iRNA_PseU:0 5840 chr21 46898256 46898256 1 + G A BLCA 46898256 - 46898236 46898276 41 CAGACTCACCGGCTTTCCGTCTTCACCGGGGTCGCCCTGGG CAGACTCACCGGCTTTCCGTTTTCACCGGGGTCGCCCTGGG Direct Gain 0 0.948192374206149 0 0.999947428703308 prediction 0.896384748412299 Functional Gain - COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46898256 chr21:46898256 nonsynonymous SNV 0.018 1 21 hPsi_associated_SNPs_106880 0 0 0 0 0 Nucleus 0 0.438719082054856 0.999894857406616 0 hPsi_site_5840 iPseU_CNN:0.999894857406616;iRNA_PseU:0 5841 chr3 58080588 58080588 1 + G T LUAD 58080588 + 58080568 58080608 41 GAGCCCACTGGAAACATGGTGAAGCAGCCAGCCAAGTTCAC GAGCCCACTGGAAACATGGTTAAGCAGCCAGCCAAGTTCAC Direct Gain 0 0.948189973137286 0 0.848294734954834 prediction 0.896379946274571 Functional Gain - FLNB ENSG00000136068 CDS Human protein_coding chr3:58080588 chr3:58080588 synonymous SNV . 0 21 hPsi_associated_SNPs_106881 0 0 1 0 2 Cytosol 0 0.438720063152772 0.696589469909668 0 hPsi_site_5841 iPseU_CNN:0.696589469909668;iRNA_PseU:0 5842 chr11 69462905 69462905 1 + G A LUSC 69462905 - 69462885 69462925 41 ATCACCCTCACTTACCGGGTCACACTTGATCACTCTGGAGA ATCACCCTCACTTACCGGGTTACACTTGATCACTCTGGAGA Direct Gain 0 0.948186532301789 0 0.999357938766479 prediction 0.896373064603577 Functional Gain - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69462905 chr11:69462905 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_106882 0 0 0 0 0 Ribosome 0 0.438720024677574 0.998715877532958 0 hPsi_site_5842 iPseU_CNN:0.998715877532958;iRNA_PseU:0 5843 chr17 73124893 73124893 1 + C T rs150791316 73124893 + 73124873 73124913 41 GAGACGGTGCTGTCTGCCATCACCACGCTCATGCACCTGAG GAGACGGTGCTGTCTGCCATTACCACGCTCATGCACCTGAG Direct Gain 0 0.948185853256624 0 0.988887190818787 prediction 0.896371706513247 Functional Gain - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73124893 chr17:73124893 nonsynonymous SNV 0.243 0 21 hPsi_associated_SNPs_106883 0 0 0 0 0 Cytosol 0 0.437551693927536 0.977774381637574 0 hPsi_site_5843 iPseU_CNN:0.977774381637574;iRNA_PseU:0 5844 chr17 79432916 79432916 1 + C A rs551366794 79432916 - 79432896 79432936 41 CGAGCCTCAAGCAGGACCTCGTCCAACCACCTCCCCAGACA CGAGCCTCAAGCAGGACCTCTTCCAACCACCTCCCCAGACA Direct Gain 0 0.948177015467077 0 0.468916326761246 prediction 0.896354030934153 Functional Gain - BAHCC1 ENSG00000171282 UTR3 Human other chr17:79432916 chr17:79432916 . . 0 21 hPsi_associated_SNPs_106884 0 0 0 0 0 chromatin 0 0.438820020746751 0 0 hPsi_site_5844 iPseU_CNN:0;iRNA_PseU:0 5845 chr17 37865596 37865596 1 + C A UCEC 37865596 - 37865576 37865616 41 CAGAGCTGGGGGTTCCGCTGGATCAAGACCCCTCCTTTCAA CAGAGCTGGGGGTTCCGCTGTATCAAGACCCCTCCTTTCAA Direct Gain 0 0.948176440684574 0 0.993097841739655 prediction 0.896352881369148 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37865596 chr17:37865596 synonymous SNV . 0 21 hPsi_associated_SNPs_106885 0 0 0 0 0 Cytosol 0 0.438718593031905 0.98619568347931 0 hPsi_site_5845 iPseU_CNN:0.98619568347931;iRNA_PseU:0 5846 chr15 33941338 33941338 1 + G T BLCA 33941338 + 33941318 33941358 41 TGTGTCTGGGTCGGATGGGTGACTCCAGACTATCACTTGTA TGTGTCTGGGTCGGATGGGTTACTCCAGACTATCACTTGTA Direct Gain 0 0.948157722936574 0 0.999946594238281 prediction 0.896315445873149 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:33941338 chr15:33941338 synonymous SNV . 0 21 hPsi_associated_SNPs_106886 0 0 0 0 2 exosome 0 0.438653104122154 0.999893188476562 0 hPsi_site_5846 iPseU_CNN:0.999893188476562;iRNA_PseU:0 5847 chr19 53888578 53888578 1 + G A rs150237885 53888578 - 53888558 53888598 41 ATGGAGTCTCTTTTTATACTCATGTCTTATCCTTTTGAGGG ATGGAGTCTCTTTTTATACTTATGTCTTATCCTTTTGAGGG Direct Gain 0 0.948153413951648 0 0.996509432792664 prediction 0.896306827903297 Functional Gain - ZNF525 ENSG00000203326 UTR3 Human protein_coding chr19:53888578 chr19:53888578 . . 0 21 hPsi_associated_SNPs_106887 0 0 0 0 0 chromatin 0 0.438715443409091 0.993018865585328 0 hPsi_site_5847 iPseU_CNN:0.993018865585328;iRNA_PseU:0 5848 chr17 11725280 11725280 1 + C T BLCA 11725280 + 11725260 11725300 41 GATGATGAAGTTGAAAACATCATAAGCAATGTGAGGAATGA GATGATGAAGTTGAAAACATTATAAGCAATGTGAGGAATGA Direct Gain 0 0.948152577122144 0 0.280190706253052 prediction 0.896305154244288 Functional Gain - DNAH9 ENSG00000007174 CDS Human protein_coding chr17:11725280 chr17:11725280 synonymous SNV . 0 21 hPsi_associated_SNPs_106888 0 0 0 0 2 exosome 0 0.439628172349704 0 0 hPsi_site_5848 iPseU_CNN:0;iRNA_PseU:0 5849 chr1 159806702 159806702 1 + C A rs545922375 159806702 - 159806682 159806722 41 GACTGTAGGTGGCAGGTGGGGATGGTGCAAGCTGACAGGTT GACTGTAGGTGGCAGGTGGGTATGGTGCAAGCTGACAGGTT Direct Gain 0 0.948151835275183 0 0.994864761829376 prediction 0.896303670550367 Functional Gain - SNHG28 ENSG00000158714 UTR3 Human protein_coding chr1:159806702 chr1:159806702 . . 0 21 hPsi_associated_SNPs_106889 0 0 0 0 0 unknown 0 0.43871859227879 0.989729523658752 0 hPsi_site_5849 iPseU_CNN:0.989729523658752;iRNA_PseU:0 5850 chr20 62642790 62642790 1 + C T SKCM 62642790 + 62642770 62642810 41 ACGCAGATGGTGGAGAAGATCATCGACCGAGCCATCACCTC ACGCAGATGGTGGAGAAGATTATCGACCGAGCCATCACCTC Direct Gain 0 0.948151288085171 0 0.738880515098572 prediction 0.896302576170343 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62642790 chr20:62642790 synonymous SNV . 0 21 hPsi_associated_SNPs_106890 0 0 1 0 1 Cytosol 0 0.43824999122376 0.477761030197144 0 hPsi_site_5850 iPseU_CNN:0.477761030197144;iRNA_PseU:0 5851 chr20 36997753 36997753 1 + G A COAD 36997753 - 36997733 36997773 41 GCTGGGCAGGAGCACAAAGGCATCTATCTCCATATAGGGGT GCTGGGCAGGAGCACAAAGGTATCTATCTCCATATAGGGGT Direct Gain 0 0.948145089207124 0 0.995779275894165 prediction 0.896290178414247 Functional Gain - LBP ENSG00000129988 CDS Human protein_coding chr20:36997753 chr20:36997753 nonsynonymous SNV 0.060 0 21 hPsi_associated_SNPs_106891 0 0 0 0 0 exosome 0 0.438718514803894 0.99155855178833 0 hPsi_site_5851 iPseU_CNN:0.99155855178833;iRNA_PseU:0 5852 chr2 190339976 190339976 1 + G A LUAD 190339976 - 190339956 190339996 41 TGAATCTTCACTTTCTTTTTCTTCTTCCATATCTACATCTT TGAATCTTCACTTTCTTTTTTTTCTTCCATATCTACATCTT Direct Gain 0 0.948145085405466 0 0.916583478450775 prediction 0.896290170810931 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190339976 chr2:190339976 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_106892 0 0 0 0 0 Nucleus 0 0.438385822627427 0.83316695690155 0 hPsi_site_5852 iPseU_CNN:0.83316695690155;iRNA_PseU:0 5853 chrX 217662 217662 1 + G A rs192434627 217662 - 217642 217682 41 AAGAAATATCGGCGGCTGGGCACAGTGGCTCATGCCTGTCA AAGAAATATCGGCGGCTGGGTACAGTGGCTCATGCCTGTCA Direct Gain 0 0.948134296185856 0 0.998171091079712 prediction 0.896268592371711 Functional Gain - PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:217662 chrX:217662 . . 0 21 hPsi_associated_SNPs_106893 0 0 0 0 0 Cytosol 0 0.438746566756163 0.996342182159424 0 hPsi_site_5853 iPseU_CNN:0.996342182159424;iRNA_PseU:0 5854 chr1 161197728 161197728 1 + G A BLCA 161197728 - 161197708 161197748 41 GGTCAGAGTGGCTGTGTAGTCATCTCCCCGATACTCGCCAT GGTCAGAGTGGCTGTGTAGTTATCTCCCCGATACTCGCCAT Direct Gain 0 0.948123542891936 0 0.990802764892578 prediction 0.896247085783872 Functional Gain - TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161197728 chr1:161197728 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_106894 0 0 0 0 0 Ribosome 0 0.438718599581301 0.981605529785156 0 hPsi_site_5854 iPseU_CNN:0.981605529785156;iRNA_PseU:0 5855 chr21 46077853 46077853 1 + C T rs114984685 46077853 + 46077833 46077873 41 CCAGAGAAGCAGCTTCCAGACATCACCATCCTCCTCCCCAG CCAGAGAAGCAGCTTCCAGATATCACCATCCTCCTCCCCAG Direct Gain 0 0.948122967425859 0 0.999052166938782 prediction 0.896245934851719 Functional Gain - KRTAP12-3 ENSG00000205439 UTR5 Human protein_coding chr21:46077853 chr21:46077853 . . 0 21 hPsi_associated_SNPs_106895 0 0 0 0 0 exosome 0 0.438718661056197 0.998104333877564 0 hPsi_site_5855 iPseU_CNN:0.998104333877564;iRNA_PseU:0 5856 chr1 176668499 176668499 1 + G A LUSC 176668499 - 176668479 176668519 41 TTTGATGGTGAGTGGGATGTCACAGAAAGTGTCTAAGGGGC TTTGATGGTGAGTGGGATGTTACAGAAAGTGTCTAAGGGGC Direct Gain 0 0.948106434886668 0 0.416989296674728 prediction 0.896212869773335 Functional Gain - PAPPA2 ENSG00000116183 CDS Human protein_coding chr1:176668499 chr1:176668499 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106896 0 0 0 0 0 Cytosol 0 0.438718563057715 0 0 hPsi_site_5856 iPseU_CNN:0;iRNA_PseU:0 5857 chr1 32713232 32713232 1 + C A UCEC 32713232 - 32713212 32713252 41 TCCATTGAGTCGAAACCACAGATGTCCCCAGGTCCCCCTGG TCCATTGAGTCGAAACCACATATGTCCCCAGGTCCCCCTGG Direct Gain 0 0.948106426530371 0 0.993309259414673 prediction 0.896212853060743 Functional Gain - FAM167B ENSG00000183615 CDS Human protein_coding chr1:32713232 chr1:32713232 synonymous SNV . 0 21 hPsi_associated_SNPs_106897 0 0 0 0 0 exosome 0 0.439209208847949 0.986618518829346 0 hPsi_site_5857 iPseU_CNN:0.986618518829346;iRNA_PseU:0 5858 chr7 86468900 86468900 1 + C T SKCM 86468900 + 86468880 86468920 41 AGCCCCAGTTCTCAGGTTTTCATCTGCCTGGGTCTGATCCT AGCCCCAGTTCTCAGGTTTTTATCTGCCTGGGTCTGATCCT Direct Gain 0 0.948106172273659 0 0.999741673469543 prediction 0.896212344547318 Functional Gain - GRM3 ENSG00000198822 CDS Human protein_coding chr7:86468900 chr7:86468900 synonymous SNV . 0 21 hPsi_associated_SNPs_106898 0 0 0 0 0 Endoplasmic reticulum 0 0.438718938795841 0.999483346939086 0 hPsi_site_5858 iPseU_CNN:0.999483346939086;iRNA_PseU:0 5859 chr3 197762812 197762812 1 + C A UCEC 197762812 - 197762792 197762832 41 GCAGAGCAGGTTTCCATCGTGAATCCAGCCATTCATCTGGA GCAGAGCAGGTTTCCATCGTTAATCCAGCCATTCATCTGGA Direct Gain 0 0.948104460795919 0 0.997893333435059 prediction 0.896208921591837 Functional Gain - LMLN ENSG00000185621 CDS Human protein_coding chr3:197762812 chr3:197762812 nonsynonymous SNV 0.980 4 21 hPsi_associated_SNPs_106899 0 0 0 0 0 Endoplasmic reticulum 0 0.446996308377847 0.995786666870118 0 hPsi_site_5859 iPseU_CNN:0.995786666870118;iRNA_PseU:0 5860 chr19 49994439 49994439 1 + G T rs368173441 49994439 + 49994419 49994459 41 GGACCTGGAGCCTGGCAGATGATGTCCTTATCTCACGATGG GGACCTGGAGCCTGGCAGATTATGTCCTTATCTCACGATGG Direct Gain 0 0.948102133533396 0 0.932341814041138 prediction 0.896204267066792 Functional Gain - SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994439 chr19:49994439 . . 0 21 hPsi_associated_SNPs_106900 0 0 1 0 0 unknown 0 0.438718591309144 0.864683628082276 0 hPsi_site_5860 iPseU_CNN:0.864683628082276;iRNA_PseU:0 5861 chr12 4705324 4705324 1 + G A SARC 4705324 - 4705304 4705344 41 ATAGCGGTAGGCAATGTGATCATGCAGGACCTGTGGAAGCC ATAGCGGTAGGCAATGTGATTATGCAGGACCTGTGGAAGCC Direct Gain 0 0.948101826724358 0 0.999806225299835 prediction 0.896203653448715 Functional Gain - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4705324 chr12:4705324 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_106901 0 0 0 0 0 Ribosome 0 0.434146018624588 0.99961245059967 0 hPsi_site_5861 iPseU_CNN:0.99961245059967;iRNA_PseU:0 5862 chr9 5126407 5126407 1 + T A rs140219534 5126407 - 5126387 5126427 41 GGTCTTGGTAATCTTCCATTATTCTTCAAAAGTTCTATCAA GGTCTTGGTAATCTTCCATTTTTCTTCAAAAGTTCTATCAA Direct Gain 0 0.948099150120654 0 0.963747024536133 prediction 0.896198300241309 Functional Gain - JAK2 ENSG00000096968 CDS Human protein_coding chr9:5126407 chr9:5126407 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_106902 0 0 0 0 0 chromatin 0 0.438700770759505 0.927494049072266 0 hPsi_site_5862 iPseU_CNN:0.927494049072266;iRNA_PseU:0 5863 chr12 57857819 57857819 1 + C T LUSC 57857819 + 57857799 57857839 41 TTCTGCCACCAAGCTAACCTCATGTCCGGCCCCCACAGTTA TTCTGCCACCAAGCTAACCTTATGTCCGGCCCCCACAGTTA Direct Gain 0 0.948097610303742 0 0.636716306209564 prediction 0.896195220607485 Functional Gain - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57857819 chr12:57857819 synonymous SNV . 0 21 hPsi_associated_SNPs_106903 0 0 0 0 1 nucleoplasm 0 0.438718673777534 0.273432612419128 0 hPsi_site_5863 iPseU_CNN:0.273432612419128;iRNA_PseU:0 5864 chr14 102514236 102514236 1 + G A BLCA 102514236 - 102514216 102514256 41 GACGTGGAGTCTGTCCTCGTCTTCTTCTCAGTCTCTGCGTA GACGTGGAGTCTGTCCTCGTTTTCTTCTCAGTCTCTGCGTA Direct Gain 0 0.948092074773232 0 0.999883890151978 prediction 0.896184149546465 Functional Gain - DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102514236 chr14:102514236 synonymous SNV . 0 21 hPsi_associated_SNPs_106904 0 0 0 0 0 Cytosol 0 0.438694012569221 0.999767780303956 0 hPsi_site_5864 iPseU_CNN:0.999767780303956;iRNA_PseU:0 5865 chr20 61392828 61392828 1 + C T rs146672963 61392828 + 61392808 61392848 41 AGGATCCAGGCTCCACAGAGCACATGACTAGCCAGGCCCCT AGGATCCAGGCTCCACAGAGTACATGACTAGCCAGGCCCCT Direct Gain 0 0.948091651986897 0 0.999207615852356 prediction 0.896183303973795 Functional Gain - NTSR1 ENSG00000101188 UTR3 Human protein_coding chr20:61392828 chr20:61392828 . . 0 21 hPsi_associated_SNPs_106905 0 0 0 0 0 exosome 0 0.438720100399206 0.998415231704712 0 hPsi_site_5865 iPseU_CNN:0.998415231704712;iRNA_PseU:0 5866 chr13 39343846 39343846 1 + G A LUAD 39343846 - 39343826 39343866 41 CTGAAAGGTTTCAGACTGCTCATGCTCCCCATCACTCAGGA CTGAAAGGTTTCAGACTGCTTATGCTCCCCATCACTCAGGA Direct Gain 0 0.948087441730869 0 0.999937772750854 prediction 0.896174883461738 Functional Gain - FREM2 ENSG00000150893 CDS Human protein_coding chr13:39343846 chr13:39343846 nonsynonymous SNV 0.551 4 21 hPsi_associated_SNPs_106906 0 0 0 0 0 exosome 0 0.438718538450096 0.999875545501708 0 hPsi_site_5866 iPseU_CNN:0.999875545501708;iRNA_PseU:0 5867 chr1 34666496 34666496 1 + C A UCEC 34666496 - 34666476 34666516 41 TCTTGGGCGGCAGGGTCAGTGATGCGGTGCCCACTGCGTCA TCTTGGGCGGCAGGGTCAGTTATGCGGTGCCCACTGCGTCA Direct Gain 0 0.948085134781561 0 0.99474835395813 prediction 0.896170269563122 Functional Gain - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34666496 chr1:34666496 stopgain 0.002 0 21 hPsi_associated_SNPs_106907 0 0 0 0 0 unknown 0 0.438718198464977 0.98949670791626 0 hPsi_site_5867 iPseU_CNN:0.98949670791626;iRNA_PseU:0 5868 chr19 21119910 21119910 1 + C T rs142951396 21119910 + 21119890 21119930 41 GTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCC GTGCAGTGGCACGATCTCGGTTCACTGCAACCTCCGCCTCC Direct Gain 0 0.948083429888424 0 0.999931454658508 prediction 0.896166859776848 Functional Gain - ZNF85 ENSG00000105750 UTR5 Human protein_coding chr19:21119910 chr19:21119910 . . 0 21 hPsi_associated_SNPs_106908 0 0 0 0 0 exosome 0 0.438484236608226 0.999862909317016 0 hPsi_site_5868 iPseU_CNN:0.999862909317016;iRNA_PseU:0 5869 chr9 87488204 87488204 1 + G A rs200358775 87488204 - 87488184 87488224 41 CAGGCCATGGCCTTCCAAGGCATACAAACAACTCCCAAAGC CAGGCCATGGCCTTCCAAGGTATACAAACAACTCCCAAAGC Direct Gain 0 0.948082882956457 0 0.725136637687683 prediction 0.896165765912914 Functional Gain - NTRK2 ENSG00000148053 UTR3 Human protein_coding chr9:87488204 chr9:87488204 . . 0 21 hPsi_associated_SNPs_106909 0 0 0 0 0 Cytosol 0 0.438718592995102 0.450273275375366 0 hPsi_site_5869 iPseU_CNN:0.450273275375366;iRNA_PseU:0 5870 chr2 136362568 136362568 1 + G A LUSC 136362568 - 136362548 136362588 41 ACCTGCAAATCTATATTGTTCTCAATACAATGTTCATTCTT ACCTGCAAATCTATATTGTTTTCAATACAATGTTCATTCTT Direct Gain 0 0.948076544812309 0 0.909916579723358 prediction 0.896153089624618 Functional Gain - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136362568 chr2:136362568 synonymous SNV . 0 21 hPsi_associated_SNPs_106910 0 0 0 0 0 Cytosol 0 0.438738945270534 0.819833159446716 0 hPsi_site_5870 iPseU_CNN:0.819833159446716;iRNA_PseU:0 5871 chr10 134999903 134999903 1 + G A rs78452191 134999903 - 134999883 134999923 41 AGCCTGGAAGCTAGAAAGGCCATTTTTCCTGTCCAGAAAGG AGCCTGGAAGCTAGAAAGGCTATTTTTCCTGTCCAGAAAGG Direct Gain 0 0.948074253168089 0 0.901677370071411 prediction 0.896148506336179 Functional Gain - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:134999903 chr10:134999903 nonsynonymous SNV 0.005 3 21 hPsi_associated_SNPs_106911 0 0 0 0 0 Endoplasmic reticulum 0 0.438720108236406 0.803354740142822 0 hPsi_site_5871 iPseU_CNN:0.803354740142822;iRNA_PseU:0 5872 chr3 16217089 16217089 1 + C A UCEC 16217089 - 16217069 16217109 41 GGGTCAACTCCTCTTCTTCAGACACCTCCCCGTCCTCATCA GGGTCAACTCCTCTTCTTCATACACCTCCCCGTCCTCATCA Direct Gain 0 0.948066380242979 0 0.999947071075439 prediction 0.896132760485958 Functional Gain - GALNT15 ENSG00000131386 CDS Human protein_coding chr3:16217089 chr3:16217089 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_106912 0 0 0 0 0 exosome 0 0.438718588402107 0.999894142150878 0 hPsi_site_5872 iPseU_CNN:0.999894142150878;iRNA_PseU:0 5873 chr20 30327089 30327089 1 + T A rs17093563 30327089 - 30327069 30327109 41 CGCCGCGGGACTCATTCAGTATCGTTGAAATTTTGAACCCA CGCCGCGGGACTCATTCAGTTTCGTTGAAATTTTGAACCCA Direct Gain 0 0.948064045406635 0 0.99999988079071 prediction 0.896128090813271 Functional Gain - TPX2 ENSG00000088325 UTR5 Human protein_coding chr20:30327089 chr20:30327089 . . 0 21 hPsi_associated_SNPs_106913 0 0 0 0 0 Cytosol 0 0.438954016866631 0.99999976158142 0 hPsi_site_5873 iPseU_CNN:0.99999976158142;iRNA_PseU:0 5874 chr1 116943772 116943772 1 + C A rs114525271 116943772 - 116943752 116943792 41 GTGTGGCAGGTGAACTCCACGATTTTCCTCTGCTCATAGGT GTGTGGCAGGTGAACTCCACTATTTTCCTCTGCTCATAGGT Direct Gain 0 0.948063967555776 0 0.269105195999146 prediction 0.896127935111551 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116943772 chr1:116943772 synonymous SNV . 0 21 hPsi_associated_SNPs_106914 0 0 0 0 0 Nucleus 0 0.438718627001552 0 0 hPsi_site_5874 iPseU_CNN:0;iRNA_PseU:0 5875 chr19 55106395 55106395 1 + C A rs10417158 55106395 - 55106375 55106415 41 GTCACCACCAGCTCCAGGGGGTCACTGGGCTCTGACCAGCC GTCACCACCAGCTCCAGGGGTTCACTGGGCTCTGACCAGCC Direct Gain 0 0.948061470417939 0 0.995217561721802 prediction 0.896122940835877 Functional Gain - LILRA1 ENSG00000104974 CDS Human protein_coding chr19:55106395 chr19:55106395 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_106915 0 0 0 0 0 exosome 0 0.438723884877338 0.990435123443604 0 hPsi_site_5875 iPseU_CNN:0.990435123443604;iRNA_PseU:0 5876 chr5 140746060 140746060 1 + G A ESCA 140746060 - 140746040 140746080 41 TCAGCCTGAAGCAGGCGTGACTTGTGCCAGCGCCTCAGTCT TCAGCCTGAAGCAGGCGTGATTTGTGCCAGCGCCTCAGTCT Direct Gain 0 0.948059904299305 0 0.888353765010834 prediction 0.896119808598611 Functional Gain - PCDHGA5 ENSG00000253485 CDS Human protein_coding chr5:140746060 chr5:140746060 synonymous SNV . 0 21 hPsi_associated_SNPs_106916 0 0 0 0 0 exosome 0 0.438721059710678 0.776707530021668 0 hPsi_site_5876 iPseU_CNN:0.776707530021668;iRNA_PseU:0 5877 chr1 160769745 160769745 1 + C A UCEC 160769745 - 160769725 160769765 41 AGGGAGTAACTCCACTTGGTGATGTCTAGTCGGCCCAGGTA AGGGAGTAACTCCACTTGGTTATGTCTAGTCGGCCCAGGTA Direct Gain 0 0.948059146864257 0 0.997459888458252 prediction 0.896118293728515 Functional Gain - LY9 ENSG00000122224 CDS Human protein_coding chr1:160769745 chr1:160769745 synonymous SNV . 0 21 hPsi_associated_SNPs_106917 0 0 0 0 0 exosome 0 0.439623073152217 0.994919776916504 0 hPsi_site_5877 iPseU_CNN:0.994919776916504;iRNA_PseU:0 5878 chr3 89448615 89448615 1 + G T LGG 89448615 + 89448595 89448635 41 ACAGCCGCAAGTTTGAGTTTGAAACTAGTCCAGACTGTATG ACAGCCGCAAGTTTGAGTTTTAAACTAGTCCAGACTGTATG Direct Gain 0 0.948058183405005 0 0.265818536281586 prediction 0.896116366810011 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89448615 chr3:89448615 stopgain 0.984 1 21 hPsi_associated_SNPs_106918 0 0 0 2 1 Ribosome 0 0.438718592823377 0 0 hPsi_site_5878 iPseU_CNN:0;iRNA_PseU:0 5879 chr11 114569276 114569276 1 + C A LUAD 114569276 - 114569256 114569296 41 GCAAACAGGCCAGTGAAGATGATCCTATCACATCCTTGGTT GCAAACAGGCCAGTGAAGATTATCCTATCACATCCTTGGTT Direct Gain 0 0.948054829462221 0 0.141264408826828 prediction 0.896109658924442 Functional Gain - NXPE2 ENSG00000204361 CDS Human protein_coding chr11:114569276 chr11:114569276 synonymous SNV . 0 21 hPsi_associated_SNPs_106919 0 0 0 0 0 exosome 0 0.438710848896583 0 0 hPsi_site_5879 iPseU_CNN:0;iRNA_PseU:0 5880 chr19 37100830 37100830 1 + G T ACC 37100830 + 37100810 37100850 41 CTAGAGTATGCCCTTACAGGGATCAGTGTCATTCAAGGATG CTAGAGTATGCCCTTACAGGTATCAGTGTCATTCAAGGATG Direct Gain 0 0.948050870188664 0 0.998073220252991 prediction 0.896101740377329 Functional Gain - ZNF382 ENSG00000161298 CDS Human protein_coding chr19:37100830 chr19:37100830 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_106920 0 0 1 0 2 exosome 0 0.440096925719869 0.996146440505982 0 hPsi_site_5880 iPseU_CNN:0.996146440505982;iRNA_PseU:0 5881 chr1 158262110 158262110 1 + C T SKCM 158262110 + 158262090 158262130 41 GAAGCACTTGCCCCCGATTTCTCTTGGGTCTCCTGGATGCA GAAGCACTTGCCCCCGATTTTTCTTGGGTCTCCTGGATGCA Direct Gain 0 0.948047434821739 0 0.959184408187866 prediction 0.896094869643479 Functional Gain - CD1C ENSG00000158481 CDS Human protein_coding chr1:158262110 chr1:158262110 nonsynonymous SNV 0.006 0 21 hPsi_associated_SNPs_106921 0 0 0 0 1 exosome 0 0.438732813219039 0.918368816375732 0 hPsi_site_5881 iPseU_CNN:0.918368816375732;iRNA_PseU:0 5882 chr9 17394920 17394920 1 + C A LIHC 17394920 - 17394900 17394940 41 ATTTAACCTTGGTCATAGTTGTCTTACAATCATATCGTCCA ATTTAACCTTGGTCATAGTTTTCTTACAATCATATCGTCCA Direct Gain 0 0.948047162536016 0 0.999090552330017 prediction 0.896094325072031 Functional Gain - CNTLN ENSG00000044459 CDS Human protein_coding chr9:17394920 chr9:17394920 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_106922 0 0 0 0 0 Nucleus 0 0.438717656430716 0.998181104660034 0 hPsi_site_5882 iPseU_CNN:0.998181104660034;iRNA_PseU:0 5883 chr4 5332977 5332977 1 + C T SKCM 5332977 + 5332957 5332997 41 CAGGATGAGGAGGACATGTTCATGGTGGTGGACCTGCTCCT CAGGATGAGGAGGACATGTTTATGGTGGTGGACCTGCTCCT Direct Gain 0 0.948046594639978 0 0.865657150745392 prediction 0.896093189279957 Functional Gain - STK32B ENSG00000152953 CDS Human protein_coding chr4:5332977 chr4:5332977 synonymous SNV . 0 21 hPsi_associated_SNPs_106923 0 0 0 0 1 Nucleus 0 0.438718506235214 0.731314301490784 0 hPsi_site_5883 iPseU_CNN:0.731314301490784;iRNA_PseU:0 5884 chr19 2223424 2223424 1 + C T UCEC 2223424 + 2223404 2223444 41 TGAGCCAGACCAATGGGGCACACTACTCCCCACTCACCTCA TGAGCCAGACCAATGGGGCATACTACTCCCCACTCACCTCA Direct Gain 0 0.948035116382553 0 0.986691296100616 prediction 0.896070232765106 Functional Gain - DOT1L ENSG00000104885 CDS Human protein_coding chr19:2223424 chr19:2223424 nonsynonymous SNV 0.992 2 21 hPsi_associated_SNPs_106924 0 0 1 0 0 Cytosol 0 0.438718594857022 0.973382592201232 0 hPsi_site_5884 iPseU_CNN:0.973382592201232;iRNA_PseU:0 5885 chrX 30237292 30237292 1 + C A LUAD 30237292 - 30237272 30237312 41 CATCAGAAGCTTTCTCCTGGGAAAGTCCCAGGAACTGAGCA CATCAGAAGCTTTCTCCTGGTAAAGTCCCAGGAACTGAGCA Direct Gain 0 0.948031684014972 0 0.996949791908264 prediction 0.896063368029944 Functional Gain - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237292 chrX:30237292 nonsynonymous SNV 0.008 3 21 hPsi_associated_SNPs_106925 0 0 0 0 0 exosome 0 0.438721512326933 0.993899583816528 0 hPsi_site_5885 iPseU_CNN:0.993899583816528;iRNA_PseU:0 5886 chr1 55464937 55464937 1 + G A BLCA 55464937 - 55464917 55464957 41 ACCTGGGGCCGATCATGGCTCATGAGGAACGTACCGAGGGC ACCTGGGGCCGATCATGGCTTATGAGGAACGTACCGAGGGC Direct Gain 0 0.948019757722218 0 0.983991801738739 prediction 0.896039515444435 Functional Gain - BSND ENSG00000162399 CDS Human protein_coding chr1:55464937 chr1:55464937 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106926 0 0 0 0 0 unknown 0 0.4387185929965 0.967983603477478 0 hPsi_site_5886 iPseU_CNN:0.967983603477478;iRNA_PseU:0 5887 chr20 13798373 13798373 1 + C T rs528365398 13798373 + 13798353 13798393 41 GTGGGACCACCATGGTTTTACACCCCACCCTACCTTAGGGA GTGGGACCACCATGGTTTTATACCCCACCCTACCTTAGGGA Direct Gain 0 0.948017696876265 0 0.977451086044312 prediction 0.89603539375253 Functional Gain - NDUFAF5 ENSG00000101247 UTR3 Human protein_coding chr20:13798373 chr20:13798373 . . 0 21 hPsi_associated_SNPs_106927 0 0 1 0 0 Ribosome 0 0.438711685202841 0.954902172088624 0 hPsi_site_5887 iPseU_CNN:0.954902172088624;iRNA_PseU:0 5888 chr12 104474564 104474564 1 + G A COAD 104474564 - 104474544 104474584 41 TGAAGGCTTCGTGGAAGTGGCACTGTCCCTTTAGTTTCTGG TGAAGGCTTCGTGGAAGTGGTACTGTCCCTTTAGTTTCTGG Direct Gain 0 0.948017407349114 0 0.998412549495697 prediction 0.896034814698228 Functional Gain - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104474564 chr12:104474564 synonymous SNV . 0 21 hPsi_associated_SNPs_106928 0 0 0 0 0 Cytosol 0 0.438718593013531 0.996825098991394 0 hPsi_site_5888 iPseU_CNN:0.996825098991394;iRNA_PseU:0 5889 chr11 66278173 66278173 1 + G A BLCA 66278173 - 66278153 66278193 41 GGAGCCCTGCCTTCACCTCTCAGCTCCGCAGGCGTCGGAAT GGAGCCCTGCCTTCACCTCTTAGCTCCGCAGGCGTCGGAAT Direct Gain 0 0.948016337275829 0 0.480116009712219 prediction 0.896032674551658 Functional Gain - BBS1 ENSG00000174483 CDS Human protein_coding chr11:66278173 chr11:66278173 nonsynonymous SNV 0.845 1 21 hPsi_associated_SNPs_106929 0 0 0 0 0 membrane 0 0.438719121835883 0 0 hPsi_site_5889 iPseU_CNN:0;iRNA_PseU:0 5890 chr7 148947393 148947393 1 + G A HNSC 148947393 - 148947373 148947413 41 TGTAGCCGGGCAGCCTGGGACTCCATCTTCTTCTCCACAGC TGTAGCCGGGCAGCCTGGGATTCCATCTTCTTCTCCACAGC Direct Gain 0 0.948016267412966 0 0.999784827232361 prediction 0.896032534825932 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148947393 chr7:148947393 synonymous SNV . 0 21 hPsi_associated_SNPs_106930 0 0 0 0 0 Cytosol 0 0.438718593110699 0.999569654464722 0 hPsi_site_5890 iPseU_CNN:0.999569654464722;iRNA_PseU:0 5891 chr4 83375932 83375932 1 + G T UCEC 83375932 + 83375912 83375952 41 AGAGAGGCCGGAATGAAGGTGTACATCTATTCCTCAGGGAG AGAGAGGCCGGAATGAAGGTTTACATCTATTCCTCAGGGAG Direct Gain 0 0.948008595306277 0 0.999541163444519 prediction 0.896017190612554 Functional Gain - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83375932 chr4:83375932 synonymous SNV . 0 21 hPsi_associated_SNPs_106931 0 0 0 0 2 Ribosome 0 0.438718567468108 0.999082326889038 0 hPsi_site_5891 iPseU_CNN:0.999082326889038;iRNA_PseU:0 5892 chr2 207656451 207656451 1 + C T UCEC 207656451 + 207656431 207656471 41 CTAGAGATGGAAGATGCAGTCACATTTTTGAAGACTAAAAT CTAGAGATGGAAGATGCAGTTACATTTTTGAAGACTAAAAT Direct Gain 0 0.948008340507019 0 0.404578685760498 prediction 0.896016681014038 Functional Gain - FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207656451 chr2:207656451 synonymous SNV . 0 21 hPsi_associated_SNPs_106932 0 0 1 0 1 Nucleus 0 0.447932303370371 0 0 hPsi_site_5892 iPseU_CNN:0;iRNA_PseU:0 5893 chrX 50085212 50085212 1 + G T rs141322816 50085212 + 50085192 50085232 41 TTCCTCCAGGTGTCCTTTGAGATGACCCATGAGACCCTGTA TTCCTCCAGGTGTCCTTTGATATGACCCATGAGACCCTGTA Direct Gain 0 0.947994771008114 0 0.0218042731285095 prediction 0.895989542016228 Functional Gain - CCNB3 ENSG00000147082 CDS Human protein_coding chrX:50085212 chrX:50085212 nonsynonymous SNV 0.601 2 21 hPsi_associated_SNPs_106933 0 0 0 0 1 exosome 0 0.438718591499651 0 0 hPsi_site_5893 iPseU_CNN:0;iRNA_PseU:0 5894 chr3 62063840 62063840 1 + C T LGG 62063840 + 62063820 62063860 41 TTTAATTGTTCTTACAGATGCAGATTTTCTTTTACAATCCA TTTAATTGTTCTTACAGATGTAGATTTTCTTTTACAATCCA Direct Gain 0 0.947988520958531 0 0.43599945306778 prediction 0.895977041917063 Functional Gain - PTPRG ENSG00000144724 CDS Human protein_coding chr3:62063840 chr3:62063840 stopgain 1.000 1 21 hPsi_associated_SNPs_106934 0 0 0 0 2 Ribosome 0 0.437773046887347 0 0 hPsi_site_5894 iPseU_CNN:0;iRNA_PseU:0 5895 chr17 44061091 44061091 1 + C T SKCM 44061091 + 44061071 44061111 41 TTCACGTTTCACGTGGAAATCACACCCAACGTGCAGAAGGA TTCACGTTTCACGTGGAAATTACACCCAACGTGCAGAAGGA Direct Gain 0 0.947975622452115 0 0.99596631526947 prediction 0.89595124490423 Functional Gain - MAPT ENSG00000186868 CDS Human protein_coding chr17:44061091 chr17:44061091 synonymous SNV . 0 21 hPsi_associated_SNPs_106935 0 0 0 0 0 cytosol 0 0.438718593050155 0.99193263053894 0 hPsi_site_5895 iPseU_CNN:0.99193263053894;iRNA_PseU:0 5896 chr3 50608743 50608743 1 + C T HNSC 50608743 + 50608723 50608763 41 CCAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAAAACA CCAGTGAGTACATCGTGGCTTATGTCCTTGGAGCCAAAACA Direct Gain 0 0.947974520783729 0 0.947629928588867 prediction 0.895949041567459 Functional Gain - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50608743 chr3:50608743 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_106936 0 0 0 0 1 Ribosome 0 0.438718592995038 0.895259857177734 0 hPsi_site_5896 iPseU_CNN:0.895259857177734;iRNA_PseU:0 5897 chr5 10256236 10256236 1 + G A HNSC 10256236 - 10256216 10256256 41 CCCAGCGTGGTTTTTGCTGTCTGAATCAGGGGTTCGGTGTC CCCAGCGTGGTTTTTGCTGTTTGAATCAGGGGTTCGGTGTC Direct Gain 0 0.947967334378887 0 0.96350622177124 prediction 0.895934668757775 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10256236 chr5:10256236 synonymous SNV . 0 21 hPsi_associated_SNPs_106937 0 0 0 0 0 Cytosol 0 0.438717236857321 0.92701244354248 0 hPsi_site_5897 iPseU_CNN:0.92701244354248;iRNA_PseU:0 5898 chr21 39671657 39671657 1 + C T UCEC 39671657 + 39671637 39671677 41 ATCACGACCTTGATTGAGATCTTCATCACCGGAACCTTCCT ATCACGACCTTGATTGAGATTTTCATCACCGGAACCTTCCT Direct Gain 0 0.947965685095376 0 0.999992311000824 prediction 0.895931370190752 Functional Gain - KCNJ15 ENSG00000157551 CDS Human protein_coding chr21:39671657 chr21:39671657 synonymous SNV . 0 21 hPsi_associated_SNPs_106938 0 0 0 0 0 exosome 0 0.438714875923072 0.999984622001648 0 hPsi_site_5898 iPseU_CNN:0.999984622001648;iRNA_PseU:0 5899 chr6 167754990 167754990 1 + G A LGG 167754990 - 167754970 167755010 41 ACACACGGGGAGGTCTTGGTCTTGCAGGAGTGCGACTGGAA ACACACGGGGAGGTCTTGGTTTTGCAGGAGTGCGACTGGAA Direct Gain 0 0.947965208116257 0 0.402611434459686 prediction 0.895930416232514 Functional Gain - TTLL2 ENSG00000120440 CDS Human protein_coding chr6:167754990 chr6:167754990 synonymous SNV . 0 21 hPsi_associated_SNPs_106939 0 0 0 0 0 Exosome 0 0.438710115150742 0 0 hPsi_site_5899 iPseU_CNN:0;iRNA_PseU:0 5900 chr22 29707904 29707904 1 + C T BLCA 29707904 + 29707884 29707924 41 GCACCCCGGCTTTCCCGGGTCTCCAGCCCCAGTCCAGAGTT GCACCCCGGCTTTCCCGGGTTTCCAGCCCCAGTCCAGAGTT Direct Gain 0 0.947951603129348 0 0.948108673095703 prediction 0.895903206258697 Functional Gain - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29707904 chr22:29707904 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_106940 0 0 0 0 0 Ribosome 0 0.43866971754861 0.896217346191406 0 hPsi_site_5900 iPseU_CNN:0.896217346191406;iRNA_PseU:0 5901 chr22 25620893 25620893 1 + C A SARC 25620893 - 25620873 25620913 41 TGAAAGTTTTCCTGCTCAAAGATGATGATCTGCAAGAGGAA TGAAAGTTTTCCTGCTCAAATATGATGATCTGCAAGAGGAA Direct Gain 0 0.947949477854584 0 0.618147015571594 prediction 0.895898955709168 Functional Gain - CRYBB2 ENSG00000244752 CDS Human protein_coding chr22:25620893 chr22:25620893 synonymous SNV . 0 21 hPsi_associated_SNPs_106941 0 0 0 0 0 exosome 0 0.438706323481395 0.236294031143188 0 hPsi_site_5901 iPseU_CNN:0.236294031143188;iRNA_PseU:0 5902 chr16 4898157 4898157 1 + C T rs575420855 4898157 + 4898137 4898177 41 CGCCGCCGCCCGGGGACCGGCATGAGGACCGCCGCGGGGGG CGCCGCCGCCCGGGGACCGGTATGAGGACCGCCGCGGGGGG Direct Gain 0 0.947939059769383 0 0.999346315860748 prediction 0.895878119538765 Functional Gain - UBN1 ENSG00000118900 UTR5 Human protein_coding chr16:4898157 chr16:4898157 . . 0 21 hPsi_associated_SNPs_106942 0 0 1 0 1 Ribosome 0 0.448849279198406 0.998692631721496 0 hPsi_site_5902 iPseU_CNN:0.998692631721496;iRNA_PseU:0 5903 chr22 32234735 32234735 1 + C T LIHC 32234735 + 32234715 32234755 41 AAGAGTTTATTTGCCAACGTCTCATGCAGGGCTACCAAATC AAGAGTTTATTTGCCAACGTTTCATGCAGGGCTACCAAATC Direct Gain 0 0.947936559108531 0 0.999503314495087 prediction 0.895873118217062 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32234735 chr22:32234735 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106943 0 0 0 0 2 chromatin 0 0.439447871735814 0.999006628990174 0 hPsi_site_5903 iPseU_CNN:0.999006628990174;iRNA_PseU:0 5904 chr4 37445791 37445791 1 + C T rs150729425 37445791 + 37445771 37445811 41 GAAAGACATGTGAAAAATGTCACACTCCTAGTCTGGGCCAA GAAAGACATGTGAAAAATGTTACACTCCTAGTCTGGGCCAA Direct Gain 0 0.947936334938466 0 0.99999737739563 prediction 0.895872669876931 Functional Gain - NWD2 ENSG00000174145 CDS Human protein_coding chr4:37445791 chr4:37445791 synonymous SNV . 0 21 hPsi_associated_SNPs_106944 0 0 0 0 0 exosome 0 0.436011547404225 0.99999475479126 0 hPsi_site_5904 iPseU_CNN:0.99999475479126;iRNA_PseU:0 5905 chr6 43225648 43225648 1 + C T SKCM 43225648 + 43225628 43225668 41 GGCACCGATGCCCTCCTGTCCACGAGCACCTCTACCCCGCC GGCACCGATGCCCTCCTGTCTACGAGCACCTCTACCCCGCC Direct Gain 0 0.947936237911838 0 0.991663336753845 prediction 0.895872475823676 Functional Gain - TTBK1 ENSG00000146216 CDS Human protein_coding chr6:43225648 chr6:43225648 synonymous SNV . 0 21 hPsi_associated_SNPs_106945 0 0 0 0 2 exosome 0 0.438686634696153 0.98332667350769 0 hPsi_site_5905 iPseU_CNN:0.98332667350769;iRNA_PseU:0 5906 chr1 158577071 158577071 1 + G A ESCA 158577071 - 158577051 158577091 41 ATGGGATTAAGGAGGGGGGTCACTACAGTATAGGTCATGGC ATGGGATTAAGGAGGGGGGTTACTACAGTATAGGTCATGGC Direct Gain 0 0.947930005391889 0 0.282438546419144 prediction 0.895860010783778 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158577071 chr1:158577071 synonymous SNV . 0 21 hPsi_associated_SNPs_106946 0 0 0 0 0 unknown 0 0.438718627924541 0 0 hPsi_site_5906 iPseU_CNN:0;iRNA_PseU:0 5907 chrY 14898521 14898521 1 + C A STAD 14898521 - 14898501 14898541 41 GCCACCACTTTTCAAGAAGTGAACTTGAAAGTCAGAGGACC GCCACCACTTTTCAAGAAGTTAACTTGAAAGTCAGAGGACC Direct Gain 0 0.947929685160391 0 0.999142348766327 prediction 0.895859370320782 Functional Gain - USP9Y ENSG00000114374 CDS Human protein_coding chrY:14898521 chrY:14898521 nonsynonymous SNV 0.709 0 21 hPsi_associated_SNPs_106947 0 0 0 0 0 Cytosol 0 0.438704169447952 0.998284697532654 0 hPsi_site_5907 iPseU_CNN:0.998284697532654;iRNA_PseU:0 5908 chr2 108478071 108478071 1 + G A OV 108478071 - 108478051 108478091 41 AAGGGCATCATTTGCAATGTCTTCTGCCTTCCTGTGAAAAA AAGGGCATCATTTGCAATGTTTTCTGCCTTCCTGTGAAAAA Direct Gain 0 0.947928693203758 0 0.0533682405948639 prediction 0.895857386407517 Functional Gain - RGPD4 ENSG00000196862 CDS Human protein_coding chr2:108478071 chr2:108478071 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_106948 0 0 0 0 0 membrane 0 0.442718456924408 0 0 hPsi_site_5908 iPseU_CNN:0;iRNA_PseU:0 5909 chr20 8609002 8609002 1 + T A STAD 8609002 - 8608982 8609022 41 CAGGCCCATACACCACTGTGATCATGCGCTGCTCCAGGCGC CAGGCCCATACACCACTGTGTTCATGCGCTGCTCCAGGCGC Direct Gain 0 0.94792492919528 0 0.186884254217148 prediction 0.895849858390559 Functional Gain - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8609002 chr20:8609002 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_106949 0 0 0 0 0 Nucleus 0 0.438723763072885 0 0 hPsi_site_5909 iPseU_CNN:0;iRNA_PseU:0 5910 chr2 209190987 209190987 1 + T A LUSC 209190987 - 209190967 209191007 41 TGGCTCGATAATCGGCCAGCATTCTACCCAAGCTCTGGCTA TGGCTCGATAATCGGCCAGCTTTCTACCCAAGCTCTGGCTA Direct Gain 0 0.947915446664093 0 0.95854663848877 prediction 0.895830893328187 Functional Gain - PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209190987 chr2:209190987 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_106950 0 0 0 0 0 Nucleus 0 0.438676824546193 0.91709327697754 0 hPsi_site_5910 iPseU_CNN:0.91709327697754;iRNA_PseU:0 5911 chr1 3350342 3350342 1 + G A STAD 3350342 - 3350322 3350362 41 ATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGAC ATGGGGTGAAATGCTCCAGATTCCGACGTGGCTCCAGTGAC Direct Gain 0 0.947912971042724 0 0.542501151561737 prediction 0.895825942085448 Functional Gain - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3350342 chr1:3350342 synonymous SNV . 0 21 hPsi_associated_SNPs_106951 0 0 0 0 0 Nucleus 0 0.438867195298299 0.0850023031234739 0 hPsi_site_5911 iPseU_CNN:0.0850023031234739;iRNA_PseU:0 5912 chr19 56499675 56499675 1 + C A rs191914311 56499675 - 56499655 56499695 41 TCTGCCTCCTAGATTCAAGTGATTCTCCTGCCTCAGCCTCC TCTGCCTCCTAGATTCAAGTTATTCTCCTGCCTCAGCCTCC Direct Gain 0 0.947912393832663 0 0.995716094970703 prediction 0.895824787665325 Functional Gain - NLRP8 ENSG00000179709 UTR3 Human protein_coding chr19:56499675 chr19:56499675 . . 0 21 hPsi_associated_SNPs_106952 0 0 0 0 0 unknown 0 0.43872490472703 0.991432189941406 0 hPsi_site_5912 iPseU_CNN:0.991432189941406;iRNA_PseU:0 5913 chr2 27462219 27462219 1 + G T UCEC 27462219 + 27462199 27462239 41 GTGGATCTGGAGCATGAGTGGACAATTCCCAGCCACATGCC GTGGATCTGGAGCATGAGTGTACAATTCCCAGCCACATGCC Direct Gain 0 0.947908604640307 0 0.999428510665894 prediction 0.895817209280613 Functional Gain - CAD ENSG00000084774 CDS Human protein_coding chr2:27462219 chr2:27462219 nonsynonymous SNV 0.975 5 21 hPsi_associated_SNPs_106953 0 0 1 0 1 Exosome 0 0.438718608140602 0.998857021331788 0 hPsi_site_5913 iPseU_CNN:0.998857021331788;iRNA_PseU:0 5914 chr11 55433545 55433545 1 + G A SKCM 55433545 - 55433525 55433565 41 CCAGCCAAAGCCTCCCATTTCATCCAGAGTTTCTTCATGGC CCAGCCAAAGCCTCCCATTTTATCCAGAGTTTCTTCATGGC Direct Gain 0 0.947906631456867 0 0.693359375 prediction 0.895813262913733 Functional Gain - OR4C6 ENSG00000181903 CDS Human protein_coding chr11:55433545 chr11:55433545 nonsynonymous SNV 0.365 0 21 hPsi_associated_SNPs_106954 0 0 0 0 0 unknown 0 0.438682363661215 0.38671875 0 hPsi_site_5914 iPseU_CNN:0.38671875;iRNA_PseU:0 5915 chr18 66564537 66564537 1 + G T BLCA 66564537 + 66564517 66564557 41 AAAAGCAGGGACTGGAGAGAGAAAATAGAAGGCTGAAGATC AAAAGCAGGGACTGGAGAGATAAAATAGAAGGCTGAAGATC Direct Gain 0 0.947904974030652 0 0.994583487510681 prediction 0.895809948061304 Functional Gain - CCDC102B ENSG00000150636 CDS Human protein_coding chr18:66564537 chr18:66564537 stopgain 0.997 1 21 hPsi_associated_SNPs_106955 0 0 0 0 1 exosome 0 0.438718197052107 0.989166975021362 0 hPsi_site_5915 iPseU_CNN:0.989166975021362;iRNA_PseU:0 5916 chr5 72469950 72469950 1 + C T SKCM 72469950 + 72469930 72469970 41 GAGGAGGCCTGTGCCTGCTTCTCTCCTCCCCCTTATGAAGA GAGGAGGCCTGTGCCTGCTTTTCTCCTCCCCCTTATGAAGA Direct Gain 0 0.947900034704228 0 0.930195093154907 prediction 0.895800069408457 Functional Gain - TMEM174 ENSG00000164325 CDS Human protein_coding chr5:72469950 chr5:72469950 synonymous SNV . 0 21 hPsi_associated_SNPs_106956 0 0 0 0 1 unknown 0 0.43871862883785 0.860390186309814 0 hPsi_site_5916 iPseU_CNN:0.860390186309814;iRNA_PseU:0 5917 chr11 17578855 17578855 1 + C A LIHC 17578855 - 17578835 17578875 41 CTCACCAGAGCTGGTCACCAGATCATCCTTGGGGTCAGCAT CTCACCAGAGCTGGTCACCATATCATCCTTGGGGTCAGCAT Direct Gain 0 0.947899483044459 0 0.931639492511749 prediction 0.895798966088917 Functional Gain - OTOG ENSG00000188162 CDS Human protein_coding chr11:17578855 chr11:17578855 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_106957 0 0 0 0 0 exosome 0 0.436644790892178 0.863278985023498 0 hPsi_site_5917 iPseU_CNN:0.863278985023498;iRNA_PseU:0 5918 chr19 53885512 53885512 1 + C A rs112464508 53885512 - 53885492 53885532 41 GTAAGGGATGATGTATGACTGAAGGTCTTGCCACACCTATT GTAAGGGATGATGTATGACTTAAGGTCTTGCCACACCTATT Direct Gain 0 0.94789253475915 0 0.997770726680756 prediction 0.895785069518301 Functional Gain - ZNF525 ENSG00000203326 UTR3 Human protein_coding chr19:53885512 chr19:53885512 . . 0 21 hPsi_associated_SNPs_106958 0 0 0 0 0 chromatin 0 0.438718592995102 0.995541453361512 0 hPsi_site_5918 iPseU_CNN:0.995541453361512;iRNA_PseU:0 5919 chrX 103411502 103411502 1 + G T UCEC 103411502 + 103411482 103411522 41 TCGGCCATCACTTCCTACGAGAAGTTTCTAACCCCCGAGGA TCGGCCATCACTTCCTACGATAAGTTTCTAACCCCCGAGGA Direct Gain 0 0.947891435185917 0 0.998757481575012 prediction 0.895782870371833 Functional Gain - FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411502 chrX:103411502 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_106959 0 0 1 0 0 Ribosome 0 0.439057712621974 0.997514963150024 0 hPsi_site_5919 iPseU_CNN:0.997514963150024;iRNA_PseU:0 5920 chr9 140151435 140151435 1 + C A UCEC 140151435 - 140151415 140151455 41 AGAGAGCTCTGTACTGAAGAGAGCGCTCTCCTTCTCCAGGA AGAGAGCTCTGTACTGAAGATAGCGCTCTCCTTCTCCAGGA Direct Gain 0 0.9478900474605 0 0.985484957695007 prediction 0.895780094920999 Functional Gain - NELFB ENSG00000188986 CDS Human protein_coding chr9:140151435 chr9:140151435 nonsynonymous SNV 0.901 1 21 hPsi_associated_SNPs_106960 0 0 0 0 0 Ribosome 0 0.438828336491383 0.970969915390014 0 hPsi_site_5920 iPseU_CNN:0.970969915390014;iRNA_PseU:0 5921 chr14 23355626 23355626 1 + C T rs145762582 23355626 + 23355606 23355646 41 CCCTTCTTGTCACTTCCCCTCACCTCTCTCCTAGGCCTCCT CCCTTCTTGTCACTTCCCCTTACCTCTCTCCTAGGCCTCCT Direct Gain 0 0.947880370917996 0 0.285022377967834 prediction 0.895760741835991 Functional Gain - REM2 ENSG00000139890 UTR3 Human protein_coding chr14:23355626 chr14:23355626 . . 0 21 hPsi_associated_SNPs_106961 0 0 0 1 0 exosome 0 0.438718592994954 0 0 hPsi_site_5921 iPseU_CNN:0;iRNA_PseU:0 5922 chr11 124824021 124824021 1 + G A rs138340473 124824021 - 124824001 124824041 41 CCGTCCCGCCCATCCGTAGCCTTATGCCCGCCCTTTCCGGA CCGTCCCGCCCATCCGTAGCTTTATGCCCGCCCTTTCCGGA Direct Gain 0 0.947875214914518 0 0.930686712265015 prediction 0.895750429829036 Functional Gain - CCDC15 ENSG00000149548 UTR5 Human protein_coding chr11:124824021 chr11:124824021 . . 0 21 hPsi_associated_SNPs_106962 0 0 0 0 0 chromatin 0 0.438718593849357 0.86137342453003 0 hPsi_site_5922 iPseU_CNN:0.86137342453003;iRNA_PseU:0 5923 chr14 102028596 102028596 1 + G A OV 102028596 - 102028576 102028616 41 GAGACGCTCGAAGTAGGCGCCATAGGCCGAGCTGCTGGAGT GAGACGCTCGAAGTAGGCGCTATAGGCCGAGCTGCTGGAGT Direct Gain 0 0.947872058895766 0 0.826698303222656 prediction 0.895744117791532 Functional Gain - DIO3 ENSG00000197406 CDS Human protein_coding chr14:102028596 chr14:102028596 unknown 0.461 2 21 hPsi_associated_SNPs_106963 0 0 0 0 0 Endoplasmic reticulum 0 0.438582393717964 0.653396606445312 0 hPsi_site_5923 iPseU_CNN:0.653396606445312;iRNA_PseU:0 5924 chr19 3728466 3728466 1 + C T LUSC 3728466 + 3728446 3728486 41 ATCTGGGAACAGCACACGGCCACACTGTCCAAGGTGAGGCC ATCTGGGAACAGCACACGGCTACACTGTCCAAGGTGAGGCC Direct Gain 0 0.947866281069319 0 0.0430462658405304 prediction 0.895732562138638 Functional Gain - TJP3 ENSG00000105289 CDS Human protein_coding chr19:3728466 chr19:3728466 synonymous SNV . 0 21 hPsi_associated_SNPs_106964 0 0 0 0 2 Ribosome 0 0.438697878235429 0 0 hPsi_site_5924 iPseU_CNN:0;iRNA_PseU:0 5925 chr19 23329319 23329319 1 + G T LUAD 23329319 + 23329299 23329339 41 TGTGGTAAAGCCTTTAGGCGGTTCTCACACCTTACTAGGCA TGTGGTAAAGCCTTTAGGCGTTTCTCACACCTTACTAGGCA Direct Gain 0 0.947865676747628 0 0.995413064956665 prediction 0.895731353495256 Functional Gain - ZNF730 ENSG00000183850 CDS Human protein_coding chr19:23329319 chr19:23329319 synonymous SNV . 0 21 hPsi_associated_SNPs_106965 0 0 0 0 0 chromatin 0 0.438720921801698 0.99082612991333 0 hPsi_site_5925 iPseU_CNN:0.99082612991333;iRNA_PseU:0 5926 chr6 147581799 147581799 1 + C T UCEC 147581799 + 147581779 147581819 41 AGTAAGTGGCTCTATGTGGGCACTGAACGAGGTAATATACA AGTAAGTGGCTCTATGTGGGTACTGAACGAGGTAATATACA Direct Gain 0 0.947863581052262 0 0.995339870452881 prediction 0.895727162104524 Functional Gain - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147581799 chr6:147581799 synonymous SNV . 0 21 hPsi_associated_SNPs_106966 0 0 1 0 1 Nucleus 0 0.438715825442237 0.990679740905762 0 hPsi_site_5926 iPseU_CNN:0.990679740905762;iRNA_PseU:0 5927 chr15 48500070 48500070 1 + G T LUAD 48500070 + 48500050 48500090 41 ATGAAGAAACCTCTTTTGGGGATGAAGCTCAGAAAAGACTC ATGAAGAAACCTCTTTTGGGTATGAAGCTCAGAAAAGACTC Direct Gain 0 0.947863015583395 0 0.916812896728516 prediction 0.895726031166791 Functional Gain - SLC12A1 ENSG00000074803 CDS Human protein_coding chr15:48500070 chr15:48500070 nonsynonymous SNV 0.954 2 21 hPsi_associated_SNPs_106967 0 0 0 0 0 exosome 0 0.438718662747579 0.833625793457032 0 hPsi_site_5927 iPseU_CNN:0.833625793457032;iRNA_PseU:0 5928 chr7 116146138 116146138 1 + G A UCEC 116146138 - 116146118 116146158 41 GCAGGCTGACAGAAGAGAAGCATCGTCCTACGCTCGTACAC GCAGGCTGACAGAAGAGAAGTATCGTCCTACGCTCGTACAC Direct Gain 0 0.947859311849759 0 0.99542248249054 prediction 0.895718623699517 Functional Gain - CAV2 ENSG00000105971 CDS Human protein_coding chr7:116146138 chr7:116146138 nonsynonymous SNV 0.990 2 21 hPsi_associated_SNPs_106968 0 0 0 0 0 Ribosome 0 0.438690316049556 0.99084496498108 0 hPsi_site_5928 iPseU_CNN:0.99084496498108;iRNA_PseU:0 5929 chr1 1421959 1421959 1 + C T UCEC 1421959 + 1421939 1421979 41 TCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGC TCAGGCATGGACTACGCCATTATGACAGGCGGGGACGTGGC Direct Gain 0 0.947859108386283 0 0.000214695930480957 prediction 0.895718216772565 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421959 chr1:1421959 synonymous SNV . 0 21 hPsi_associated_SNPs_106969 0 0 0 0 2 Ribosome 0 0.438796017033121 0 0 hPsi_site_5929 iPseU_CNN:0;iRNA_PseU:0 5930 chr7 90042324 90042324 1 + G A LUSC 90042324 - 90042304 90042344 41 GGGCACCGAGGACCTGAAGGCAGTGTTGCACATTCCAATCA GGGCACCGAGGACCTGAAGGTAGTGTTGCACATTCCAATCA Direct Gain 0 0.947855300477959 0 0.979226231575012 prediction 0.895710600955918 Functional Gain - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042324 chr7:90042324 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106970 0 0 0 0 0 Ribosome 0 0.438773694645502 0.958452463150024 0 hPsi_site_5930 iPseU_CNN:0.958452463150024;iRNA_PseU:0 5931 chr15 42129862 42129862 1 + C T rs187758054 42129862 + 42129842 42129882 41 GCAGTGGTGTGATGTCAGCTCACTGCAAGCTCCGCCTCCCA GCAGTGGTGTGATGTCAGCTTACTGCAAGCTCCGCCTCCCA Direct Gain 0 0.947847932862432 0 0.999388039112091 prediction 0.895695865724865 Functional Gain - JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708 intronic Human other chr15:42129862 chr15:42129862 . . 0 21 hPsi_associated_SNPs_106971 0 0 0 0 0 exosome 0 0.438765766556481 0.998776078224182 0 hPsi_site_5931 iPseU_CNN:0.998776078224182;iRNA_PseU:0 5932 chr10 3146101 3146101 1 + C A UCEC 3146101 - 3146081 3146121 41 ATGATGGCGTCGACGACCTCGATGATCCTGTGCAGGGCGGA ATGATGGCGTCGACGACCTCTATGATCCTGTGCAGGGCGGA Direct Gain 0 0.947840693384331 0 0.864118099212646 prediction 0.895681386768662 Functional Gain - PFKP ENSG00000067057 CDS Human protein_coding chr10:3146101 chr10:3146101 synonymous SNV . 0 21 hPsi_associated_SNPs_106972 0 0 0 0 0 Nucleus 0 0.438709800662159 0.728236198425292 0 hPsi_site_5932 iPseU_CNN:0.728236198425292;iRNA_PseU:0 5933 chr15 74536335 74536335 1 + G A BLCA 74536335 - 74536315 74536355 41 GATCAGGGGCTCCTCTGGGTCTTCAGTGTTCTGTGGGGAGA GATCAGGGGCTCCTCTGGGTTTTCAGTGTTCTGTGGGGAGA Direct Gain 0 0.947838982437553 0 0.485379129648209 prediction 0.895677964875106 Functional Gain - CCDC33 ENSG00000140481 CDS Human protein_coding chr15:74536335 chr15:74536335 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106973 0 0 0 0 0 exosome 0 0.438716627911044 0 0 hPsi_site_5933 iPseU_CNN:0;iRNA_PseU:0 5934 chr5 1038002 1038002 1 + T A LUSC 1038002 - 1037982 1038022 41 CGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGA CGGTGGTGTACGGCATGTGTTTCTGGCTCCTGGGAGCGGGA Direct Gain 0 0.947836282485295 0 0.0669528245925903 prediction 0.895672564970589 Functional Gain - NKD2 ENSG00000145506 CDS Human protein_coding chr5:1038002 chr5:1038002 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_106974 0 0 0 0 0 exosome 0 0.438700622800743 0 0 hPsi_site_5934 iPseU_CNN:0;iRNA_PseU:0 5935 chr12 527786 527786 1 + G A BLCA 527786 - 527766 527806 41 GTACCTGATTCTCAGTCGGTCATTTTCTGAGTAGAGGCGTA GTACCTGATTCTCAGTCGGTTATTTTCTGAGTAGAGGCGTA Direct Gain 0 0.947835975863296 0 0.995261013507843 prediction 0.895671951726592 Functional Gain - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:527786 chr12:527786 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_106975 0 0 0 0 0 cytosol 0 0.438765149338939 0.990522027015686 0 hPsi_site_5935 iPseU_CNN:0.990522027015686;iRNA_PseU:0 5936 chr22 18020342 18020342 1 + C T LUAD 18020342 + 18020322 18020362 41 GGAGGAAAGTCGTTGCCCCCCACACGCCGAGCGCCCTCTTC GGAGGAAAGTCGTTGCCCCCTACACGCCGAGCGCCCTCTTC Direct Gain 0 0.947831049270203 0 0.999997973442078 prediction 0.895662098540406 Functional Gain - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18020342 chr22:18020342 synonymous SNV . 0 21 hPsi_associated_SNPs_106976 0 0 0 0 0 nucleoplasm 0 0.438714150945387 0.999995946884156 0 hPsi_site_5936 iPseU_CNN:0.999995946884156;iRNA_PseU:0 5937 chrX 64958879 64958879 1 + G A OV 64958879 - 64958859 64958899 41 TGAGGTGTACTCATGGCAGTCTTCAGCTCAGCACGGGTCTT TGAGGTGTACTCATGGCAGTTTTCAGCTCAGCACGGGTCTT Direct Gain 0 0.94783028686101 0 0.999887406826019 prediction 0.89566057372202 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64958879 chrX:64958879 synonymous SNV . 0 21 hPsi_associated_SNPs_106977 0 0 0 0 0 Ribosome 0 0.43881176612013 0.999774813652038 0 hPsi_site_5937 iPseU_CNN:0.999774813652038;iRNA_PseU:0 5938 chr1 26603736 26603736 1 + G A LUAD 26603736 - 26603716 26603756 41 TCCTGGGCATATCTGTCTGACATGGTGGTCCTTAAGTCCTC TCCTGGGCATATCTGTCTGATATGGTGGTCCTTAAGTCCTC Direct Gain 0 0.947824791829719 0 0.97110116481781 prediction 0.895649583659438 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26603736 chr1:26603736 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_106978 0 0 0 0 0 Nucleus 0 0.43866289107929 0.94220232963562 0 hPsi_site_5938 iPseU_CNN:0.94220232963562;iRNA_PseU:0 5939 chr18 54815252 54815252 1 + C T rs12605919 54815252 + 54815232 54815272 41 AGAGAGAAAGTTGACCGTGGCACCCTCCTGCATTGCGCTGC AGAGAGAAAGTTGACCGTGGTACCCTCCTGCATTGCGCTGC Direct Gain 0 0.947819985270538 0 0.999941647052765 prediction 0.895639970541077 Functional Gain - BOD1L2 ENSG00000228075 UTR3 Human protein_coding chr18:54815252 chr18:54815252 . . 0 21 hPsi_associated_SNPs_106979 0 0 0 0 0 Cytosol 0 0.438718591736162 0.99988329410553 0 hPsi_site_5939 iPseU_CNN:0.99988329410553;iRNA_PseU:0 5940 chrX 103173734 103173734 1 + C A rs1180802 103173734 - 103173714 103173754 41 AGGGCCAGAGGCTGCTTGGGGAGGCCGCCTCCTCGCCCCGC AGGGCCAGAGGCTGCTTGGGTAGGCCGCCTCCTCGCCCCGC Direct Gain 0 0.947812751335528 0 0.998295962810516 prediction 0.895625502671056 Functional Gain - LOC100128594 ENSG00000231728 ncRNA_intronic Human antisense chrX:103173734 chrX:103173734 . . 0 21 hPsi_associated_SNPs_106980 0 0 0 0 0 unknown 0 0.438718592759469 0.996591925621032 0 hPsi_site_5940 iPseU_CNN:0.996591925621032;iRNA_PseU:0 5941 chr16 50268917 50268917 1 + C T rs115637669 50268917 + 50268897 50268937 41 TGAAAACTTTCCAATCTTGTCTAGTTACCACTGCAGAGACA TGAAAACTTTCCAATCTTGTTTAGTTACCACTGCAGAGACA Direct Gain 0 0.947811797542129 0 0.258594155311584 prediction 0.895623595084257 Functional Gain - PAPD5 ENSG00000121274 UTR3 Human protein_coding chr16:50268917 chr16:50268917 . . 0 21 hPsi_associated_SNPs_106981 0 0 0 0 1 Ribosome 0 0.438722290686391 0 0 hPsi_site_5941 iPseU_CNN:0;iRNA_PseU:0 5942 chr10 122622272 122622272 1 + C T HNSC 122622272 + 122622252 122622292 41 ACCAGCGAGGGTATTGTTTTCATCTCAGACTTCTCCCCATC ACCAGCGAGGGTATTGTTTTTATCTCAGACTTCTCCCCATC Direct Gain 0 0.947806708715745 0 0.996453583240509 prediction 0.895613417431489 Functional Gain - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122622272 chr10:122622272 synonymous SNV . 0 21 hPsi_associated_SNPs_106982 0 0 1 0 1 Nucleus 0 0.438718713459028 0.992907166481018 0 hPsi_site_5942 iPseU_CNN:0.992907166481018;iRNA_PseU:0 5943 chrX 10104698 10104698 1 + C T BLCA 10104698 + 10104678 10104718 41 TCGTAGTGACAGCGACAGTTCAACGCTGCCCCGGAAGTCCC TCGTAGTGACAGCGACAGTTTAACGCTGCCCCGGAAGTCCC Direct Gain 0 0.947802099260059 0 0.320230931043625 prediction 0.895604198520118 Functional Gain - WWC3 ENSG00000047644 CDS Human protein_coding chrX:10104698 chrX:10104698 nonsynonymous SNV 0.990 2 21 hPsi_associated_SNPs_106983 0 0 0 0 2 Nucleus 0 0.438718596074875 0 0 hPsi_site_5943 iPseU_CNN:0;iRNA_PseU:0 5944 chr1 205238245 205238245 1 + T A rs36005646 205238245 - 205238225 205238265 41 TCGTCGCGAGCCTCCTGCTCAATCTTGATCTGCTCGGTGAT TCGTCGCGAGCCTCCTGCTCTATCTTGATCTGCTCGGTGAT Direct Gain 0 0.947790742663055 0 0.987067103385925 prediction 0.895581485326109 Functional Gain - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205238245 chr1:205238245 synonymous SNV . 0 21 hPsi_associated_SNPs_106984 0 0 0 0 0 chromatin 0 0.438383442776202 0.97413420677185 0 hPsi_site_5944 iPseU_CNN:0.97413420677185;iRNA_PseU:0 5945 chr9 130217307 130217307 1 + G T UCEC 130217307 + 130217287 130217327 41 CTGGGGCAGATGACATTCTCGACATCTCTAAATGTGAGCTC CTGGGGCAGATGACATTCTCTACATCTCTAAATGTGAGCTC Direct Gain 0 0.947789346139885 0 0.0702141225337982 prediction 0.895578692279769 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130217307 chr9:130217307 nonsynonymous SNV 0.990 4 21 hPsi_associated_SNPs_106985 0 0 1 0 2 chromatin 0 0.441930552145758 0 0 hPsi_site_5945 iPseU_CNN:0;iRNA_PseU:0 5946 chr1 204958537 204958537 1 + G A rs141949609 204958537 - 204958517 204958557 41 CTGGACCCAGGTGATGAACTCATTTGCTCTTTGTGAAGCTG CTGGACCCAGGTGATGAACTTATTTGCTCTTTGTGAAGCTG Direct Gain 0 0.947779635981619 0 0.984501659870148 prediction 0.895559271963238 Functional Gain - NFASC ENSG00000163531 intronic Human protein_coding chr1:204958537 chr1:204958537 . . 0 21 hPsi_associated_SNPs_106986 0 0 0 0 0 exosome 0 0.441347943049323 0.969003319740296 0 hPsi_site_5946 iPseU_CNN:0.969003319740296;iRNA_PseU:0 5947 chr3 12861638 12861638 1 + G T LIHC 12861638 + 12861618 12861658 41 CGGTCAAGTTCCTTATCTCGGACCAGCCCCATCCCATTGAC CGGTCAAGTTCCTTATCTCGTACCAGCCCCATCCCATTGAC Direct Gain 0 0.947779360040705 0 0.933582663536072 prediction 0.895558720081411 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12861638 chr3:12861638 nonsynonymous SNV 0.921 2 21 hPsi_associated_SNPs_106987 0 0 0 0 2 chromatin 0 0.434324120800738 0.867165327072144 0 hPsi_site_5947 iPseU_CNN:0.867165327072144;iRNA_PseU:0 5948 chr4 140393933 140393933 1 + G A CESC 140393933 - 140393913 140393953 41 ACTAGCCATGTTGGTCATATCATACACGAAGACAACAGCAT ACTAGCCATGTTGGTCATATTATACACGAAGACAACAGCAT Direct Gain 0 0.947778186526752 0 0.999929308891296 prediction 0.895556373053504 Functional Gain - RAB33B ENSG00000172007 CDS Human protein_coding chr4:140393933 chr4:140393933 nonsynonymous SNV 0.835 5 21 hPsi_associated_SNPs_106988 0 0 0 0 0 Nucleus 0 0.438730590623776 0.999858617782592 0 hPsi_site_5948 iPseU_CNN:0.999858617782592;iRNA_PseU:0 5949 chr8 88249313 88249313 1 + G T BLCA 88249313 + 88249293 88249333 41 AAAAACTCTACACTTGCTGAGATGTACCTACCTTCATATGA AAAAACTCTACACTTGCTGATATGTACCTACCTTCATATGA Direct Gain 0 0.947776023447557 0 0.999993324279785 prediction 0.895552046895113 Functional Gain - CNBD1 ENSG00000176571 CDS Human protein_coding chr8:88249313 chr8:88249313 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_106989 0 0 0 0 1 exosome 0 0.439358525228031 0.99998664855957 0 hPsi_site_5949 iPseU_CNN:0.99998664855957;iRNA_PseU:0 5950 chr19 17316876 17316876 1 + G T UCEC 17316876 + 17316856 17316896 41 AAGCTCCTGGAACACGTGGAGATGCACGGCCTGTACACCGA AAGCTCCTGGAACACGTGGATATGCACGGCCTGTACACCGA Direct Gain 0 0.947773023670383 0 0.999968528747559 prediction 0.895546047340765 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17316876 chr19:17316876 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_106990 0 0 1 0 1 Nucleus 0 0.438747432626925 0.999937057495118 0 hPsi_site_5950 iPseU_CNN:0.999937057495118;iRNA_PseU:0 5951 chr7 150440030 150440030 1 + C T BLCA 150440030 + 150440010 150440050 41 GGAGAACGAGAGTAACTGGGCATACAAGGCGCTCCTCAGAG GGAGAACGAGAGTAACTGGGTATACAAGGCGCTCCTCAGAG Direct Gain 0 0.947770068607621 0 0.999984085559845 prediction 0.895540137215242 Functional Gain - GIMAP1-GIMAP5;GIMAP5 ENSG00000196329 CDS Human protein_coding chr7:150440030 chr7:150440030 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_106991 0 0 0 0 0 unknown 0 0.438719433795066 0.99996817111969 0 hPsi_site_5951 iPseU_CNN:0.99996817111969;iRNA_PseU:0 5952 chrX 153418468 153418468 1 + G A rs731614 153418468 - 153418448 153418488 41 ACATTGCCAAAGGGCTTGCACACCACCAGCCACCTCTCCCA ACATTGCCAAAGGGCTTGCATACCACCAGCCACCTCTCCCA Direct Gain 0 0.947765502091009 0 0.99936580657959 prediction 0.895531004182019 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153418468 chrX:153418468 synonymous SNV . 0 21 hPsi_associated_SNPs_106992 0 0 0 0 0 unknown 0 0.438718592995282 0.99873161315918 0 hPsi_site_5952 iPseU_CNN:0.99873161315918;iRNA_PseU:0 5953 chr3 135974724 135974724 1 + C A BLCA 135974724 - 135974704 135974744 41 CCAGGGTCCAGCAAGAGACTGATCCTCTCCCTGGCTGTTAG CCAGGGTCCAGCAAGAGACTTATCCTCTCCCTGGCTGTTAG Direct Gain 0 0.947765265856162 0 0.893600165843964 prediction 0.895530531712325 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:135974724 chr3:135974724 synonymous SNV . 0 21 hPsi_associated_SNPs_106993 0 0 0 0 0 Ribosome 0 0.438711783600063 0.787200331687928 0 hPsi_site_5953 iPseU_CNN:0.787200331687928;iRNA_PseU:0 5954 chr1 153004845 153004845 1 + G A rs575372386 153004845 - 153004825 153004865 41 TGAGGGGGTGGGGTGCAAGGCTGCTTCTGCTGCTGGGAACT TGAGGGGGTGGGGTGCAAGGTTGCTTCTGCTGCTGGGAACT Direct Gain 0 0.947765108314238 0 0.411090880632401 prediction 0.895530216628477 Functional Gain - SPRR1B ENSG00000169469 CDS Human protein_coding chr1:153004845 chr1:153004845 synonymous SNV . 0 21 hPsi_associated_SNPs_106994 0 0 0 0 0 exosome 0 0.43871853137664 0 0 hPsi_site_5954 iPseU_CNN:0;iRNA_PseU:0 5955 chr5 424002 424002 1 + C T UCEC 424002 + 423982 424022 41 CTCAGGGCCCAGGAGTGGGGCACAGGCACGCCCACCGAGTA CTCAGGGCCCAGGAGTGGGGTACAGGCACGCCCACCGAGTA Direct Gain 0 0.947760064595953 0 0.999433994293213 prediction 0.895520129191906 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:424002 chr5:424002 synonymous SNV . 0 21 hPsi_associated_SNPs_106995 0 0 1 0 2 chromatin 0 0.438702098225922 0.998867988586426 0 hPsi_site_5955 iPseU_CNN:0.998867988586426;iRNA_PseU:0 5956 chr4 154259096 154259096 1 + G A rs76036887 154259096 - 154259076 154259116 41 GTCATGTATTTCTGGATGGTCAAGTGACTCTCTGCCTCCCC GTCATGTATTTCTGGATGGTTAAGTGACTCTCTGCCTCCCC Direct Gain 0 0.947755161498074 0 0.996673107147217 prediction 0.895510322996149 Functional Gain - TRIM2 ENSG00000109654 UTR3 Human protein_coding chr4:154259096 chr4:154259096 . . 0 21 hPsi_associated_SNPs_106996 0 0 0 0 0 Ribosome 0 0.438719148625114 0.993346214294434 0 hPsi_site_5956 iPseU_CNN:0.993346214294434;iRNA_PseU:0 5957 chr19 5908904 5908904 1 + G A UCEC 5908904 - 5908884 5908924 41 ATGAGCTCGTCCCTCTGGTGCACGGTGGCCTGCAGGCTGTG ATGAGCTCGTCCCTCTGGTGTACGGTGGCCTGCAGGCTGTG Direct Gain 0 0.947753927033035 0 0.512181520462036 prediction 0.895507854066071 Functional Gain - VMAC ENSG00000187650 CDS Human protein_coding chr19:5908904 chr19:5908904 synonymous SNV . 0 21 hPsi_associated_SNPs_106997 0 0 1 0 0 exosome 0 0.441592416496197 0.024363040924072 0 hPsi_site_5957 iPseU_CNN:0.024363040924072;iRNA_PseU:0 5958 chr2 131798940 131798940 1 + C A COAD 131798940 - 131798920 131798960 41 AGCAGGAAGCCATCCAGGGAGATGTCAATCATCTTCTGCAG AGCAGGAAGCCATCCAGGGATATGTCAATCATCTTCTGCAG Direct Gain 0 0.947747392298175 0 0.999891579151154 prediction 0.895494784596351 Functional Gain - ARHGEF4 ENSG00000136002 CDS Human protein_coding chr2:131798940 chr2:131798940 synonymous SNV . 0 21 hPsi_associated_SNPs_106998 0 0 0 0 0 nucleus 0 0.438579773866613 0.999783158302308 0 hPsi_site_5958 iPseU_CNN:0.999783158302308;iRNA_PseU:0 5959 chrX 103040650 103040650 1 + G T UCEC 103040650 + 103040630 103040670 41 GGCACAGAAAAGCTAATTGAGACCTATTTCTCCAAAAACTA GGCACAGAAAAGCTAATTGATACCTATTTCTCCAAAAACTA Direct Gain 0 0.947745323399945 0 0.969253659248352 prediction 0.895490646799891 Functional Gain - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103040650 chrX:103040650 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_106999 0 0 0 0 1 Endoplasmic reticulum 0 0.438719001401055 0.938507318496704 0 hPsi_site_5959 iPseU_CNN:0.938507318496704;iRNA_PseU:0 5960 chr11 119002752 119002752 1 + C T rs148361757 119002752 + 119002732 119002772 41 TGCTTGGAATGGGTTAGGGGCATGTTTCTAGTGGGGGTGGC TGCTTGGAATGGGTTAGGGGTATGTTTCTAGTGGGGGTGGC Direct Gain 0 0.947743828714597 0 0.764930486679077 prediction 0.895487657429194 Functional Gain - HINFP ENSG00000172273 intronic Human protein_coding chr11:119002752 chr11:119002752 . . 0 21 hPsi_associated_SNPs_107000 0 0 1 0 0 Cytosol 0 0.438718593032105 0.529860973358154 0 hPsi_site_5960 iPseU_CNN:0.529860973358154;iRNA_PseU:0 5961 chr20 62319013 62319013 1 + C T rs138399496 62319013 + 62318993 62319033 41 AAGGTGCTGAGCTACTGGTGCTTCAGTCCCGGCCACAGCAT AAGGTGCTGAGCTACTGGTGTTTCAGTCCCGGCCACAGCAT Direct Gain 0 0.947743037380382 0 0.999271750450134 prediction 0.895486074760764 Functional Gain - RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62319013 chr20:62319013 synonymous SNV . 0 21 hPsi_associated_SNPs_107001 0 0 1 0 1 chromatin 0 0.438762363579857 0.998543500900268 0 hPsi_site_5961 iPseU_CNN:0.998543500900268;iRNA_PseU:0 5962 chr7 142498969 142498969 1 + C T STAD 142498969 + 142498949 142498989 41 CTGAGCAGCCGCCTGAGGGTCTCGGCCACCTTCTGGCAGAA CTGAGCAGCCGCCTGAGGGTTTCGGCCACCTTCTGGCAGAA Direct Gain 0 0.947741039942222 0 0.999941945075989 prediction 0.895482079884444 Functional Gain - PRSS3P2;EPHB6 ENSG00000211772 CDS Human TR_C_gene chr7:142498969 chr7:142498969 unknown . 0 21 hPsi_associated_SNPs_107002 0 0 1 0 0 unknown 0 0.438719856065884 0.999883890151978 0 hPsi_site_5962 iPseU_CNN:0.999883890151978;iRNA_PseU:0 5963 chr2 9628371 9628371 1 + C A STAD 9628371 - 9628351 9628391 41 AGCAGCAAAGGTAGAGAAGAGACCTTTTTCTCTATCAAAGG AGCAGCAAAGGTAGAGAAGATACCTTTTTCTCTATCAAAGG Direct Gain 0 0.947731841010153 0 0.995560526847839 prediction 0.895463682020306 Functional Gain - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9628371 chr2:9628371 synonymous SNV . 0 21 hPsi_associated_SNPs_107003 0 0 0 0 0 Ribosome 0 0.438514962593483 0.991121053695678 0 hPsi_site_5963 iPseU_CNN:0.991121053695678;iRNA_PseU:0 5964 chr7 21630916 21630916 1 + G T LUAD 21630916 + 21630896 21630936 41 AGGGCTATTGACGAGCAGCTGACAGCAGCCACAACGTGGCT AGGGCTATTGACGAGCAGCTTACAGCAGCCACAACGTGGCT Direct Gain 0 0.947722363692022 0 0.00253769755363464 prediction 0.895444727384044 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21630916 chr7:21630916 synonymous SNV . 0 21 hPsi_associated_SNPs_107004 0 0 0 0 0 nucleolus 0 0.432860752616038 0 0 hPsi_site_5964 iPseU_CNN:0;iRNA_PseU:0 5965 chr22 25301103 25301103 1 + G A LIHC 25301103 - 25301083 25301123 41 AAGATCACACATGCCCTGGACATAGCCGATCTCAATGTGCT AAGATCACACATGCCCTGGATATAGCCGATCTCAATGTGCT Direct Gain 0 0.947721157115963 0 0.99999737739563 prediction 0.895442314231925 Functional Gain - SGSM1 ENSG00000167037 CDS Human protein_coding chr22:25301103 chr22:25301103 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_107005 0 0 0 0 0 exosome 0 0.438733632755715 0.99999475479126 0 hPsi_site_5965 iPseU_CNN:0.99999475479126;iRNA_PseU:0 5966 chr15 42701576 42701576 1 + G T UCEC 42701576 + 42701556 42701596 41 TTTTCAAGCAGATAGCAGGAGATGTGAGTACCTCCAAGCCC TTTTCAAGCAGATAGCAGGATATGTGAGTACCTCCAAGCCC Direct Gain 0 0.947720268521603 0 0.996840417385101 prediction 0.895440537043206 Functional Gain - CAPN3 ENSG00000092529 CDS Human protein_coding chr15:42701576 chr15:42701576 nonsynonymous SNV 0.934 3 21 hPsi_associated_SNPs_107006 0 0 0 0 2 Cytosol 0 0.438716694641167 0.993680834770202 0 hPsi_site_5966 iPseU_CNN:0.993680834770202;iRNA_PseU:0 5967 chr22 27708589 27708589 1 + G A rs112395709 27708589 - 27708569 27708609 41 GTGTACCTTGAGTATGTGTGCATGTTAGTGTGTATGTGCAC GTGTACCTTGAGTATGTGTGTATGTTAGTGTGTATGTGCAC Direct Gain 0 0.94771588974764 0 0.783162832260132 prediction 0.895431779495281 Functional Gain - LOC100507657 ENSG00000226741 ncRNA_exonic Human lincRNA chr22:27708589 chr22:27708589 . . 0 21 hPsi_associated_SNPs_107007 0 0 0 0 0 unknown 0 0.436126408145885 0.566325664520264 0 hPsi_site_5967 iPseU_CNN:0.566325664520264;iRNA_PseU:0 5968 chr11 61736834 61736834 1 + G A rs529102670 61736834 - 61736814 61736854 41 AATAGCTAGGATTACAGGCGCATGCCACCACGCCCGGCTAA AATAGCTAGGATTACAGGCGTATGCCACCACGCCCGGCTAA Direct Gain 0 0.947708723680715 0 0.999965906143188 prediction 0.89541744736143 Functional Gain - FTH1;INCENP ENSG00000269089 downstream Human other chr11:61736834 chr11:61736834 . . 0 21 hPsi_associated_SNPs_107008 0 0 0 0 0 unknown 0 0.438718592995103 0.999931812286376 0 hPsi_site_5968 iPseU_CNN:0.999931812286376;iRNA_PseU:0 5969 chr1 111891192 111891192 1 + C A rs2184884 111891192 - 111891172 111891212 41 TGGAGCAAAATTTTGTTTGTGTTTTTCCTGCTGAGGACTTA TGGAGCAAAATTTTGTTTGTTTTTTTCCTGCTGAGGACTTA Direct Gain 0 0.947708620673138 0 0.976414442062378 prediction 0.895417241346277 Functional Gain - PIFO ENSG00000173947 CDS Human protein_coding chr1:111891192 chr1:111891192 nonsynonymous SNV 0.930 0 21 hPsi_associated_SNPs_107009 0 0 0 0 0 exosome 0 0.43865410450609 0.952828884124756 0 hPsi_site_5969 iPseU_CNN:0.952828884124756;iRNA_PseU:0 5970 chr4 3319283 3319283 1 + G T LUSC 3319283 + 3319263 3319303 41 GCGTGGGACGGTGTGGGTGGGAGGGGTGCCCAGCCCTGGGG GCGTGGGACGGTGTGGGTGGTAGGGGTGCCCAGCCCTGGGG Direct Gain 0 0.947708439930663 0 0.988436698913574 prediction 0.895416879861326 Functional Gain - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319283 chr4:3319283 synonymous SNV . 0 21 hPsi_associated_SNPs_107010 0 0 1 0 0 Nucleus 0 0.438714410098886 0.976873397827148 0 hPsi_site_5970 iPseU_CNN:0.976873397827148;iRNA_PseU:0 5971 chr5 14291120 14291120 1 + G T LUSC 14291120 + 14291100 14291140 41 CGAGGACCTGGATTTGGAGGGACAGAAGCTGCTTCAGAGGA CGAGGACCTGGATTTGGAGGTACAGAAGCTGCTTCAGAGGA Direct Gain 0 0.947702885752538 0 0.203296422958374 prediction 0.895405771505077 Functional Gain - TRIO ENSG00000038382 CDS Human protein_coding chr5:14291120 chr5:14291120 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_107011 0 0 1 0 0 Nucleus 0 0.439406449265912 0 0 hPsi_site_5971 iPseU_CNN:0;iRNA_PseU:0 5972 chr7 123594182 123594182 1 + G A GBM 123594182 - 123594162 123594202 41 TCAAATTCTTGTTTTGCTTTCTCAGTGGCCTCTGTGAGACT TCAAATTCTTGTTTTGCTTTTTCAGTGGCCTCTGTGAGACT Direct Gain 0 0.947701653303305 0 0.180578917264938 prediction 0.89540330660661 Functional Gain - SPAM1 ENSG00000106304 CDS Human protein_coding chr7:123594182 chr7:123594182 synonymous SNV . 0 21 hPsi_associated_SNPs_107012 0 0 0 0 0 Nucleus 0 0.438789640241987 0 0 hPsi_site_5972 iPseU_CNN:0;iRNA_PseU:0 5973 chr12 118456908 118456908 1 + G T UCEC 118456908 + 118456888 118456928 41 ACCGGCCACAGACCCTGAATGATCTCATTTCTCATCAGGAC ACCGGCCACAGACCCTGAATTATCTCATTTCTCATCAGGAC Direct Gain 0 0.947699804933328 0 0.910216808319092 prediction 0.895399609866655 Functional Gain - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118456908 chr12:118456908 nonsynonymous SNV 0.842 4 21 hPsi_associated_SNPs_107013 0 0 1 0 1 Ribosome 0 0.438450318043323 0.820433616638184 0 hPsi_site_5973 iPseU_CNN:0.820433616638184;iRNA_PseU:0 5974 chr2 179261123 179261123 1 + C A rs536697559 179261123 - 179261103 179261143 41 GTGAGGTTAGGTGGAAGAGGGATGGTTTATTATCTGGACGC GTGAGGTTAGGTGGAAGAGGTATGGTTTATTATCTGGACGC Direct Gain 0 0.947693376976043 0 0.973227381706238 prediction 0.895386753952087 Functional Gain - MIR548N ENSG00000079156 UTR3 Human protein_coding chr2:179261123 chr2:179261123 . . 0 21 hPsi_associated_SNPs_107014 0 0 0 0 0 unknown 0 0.438718592995212 0.946454763412476 0 hPsi_site_5974 iPseU_CNN:0.946454763412476;iRNA_PseU:0 5975 chr11 55340183 55340183 1 + A T BLCA 55340183 + 55340163 55340203 41 GTTCAGAAACCTATGTGGTTAACCTACTCCTGGTTTCCAAT GTTCAGAAACCTATGTGGTTTACCTACTCCTGGTTTCCAAT Direct Gain 0 0.947689701705926 0 0.957510709762573 prediction 0.895379403411852 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55340183 chr11:55340183 nonsynonymous SNV 0.041 4 21 hPsi_associated_SNPs_107015 0 0 0 0 0 unknown 0 0.438718589053375 0.915021419525146 0 hPsi_site_5975 iPseU_CNN:0.915021419525146;iRNA_PseU:0 5976 chr15 44087216 44087216 1 + G T rs143486742 44087216 + 44087196 44087236 41 ACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCG ACTTAGACTGGAGGATATTTTTTATCTGGGGATATGATGCG Direct Gain 0 0.947682689347284 0 0.0469799041748047 prediction 0.895365378694567 Functional Gain - SERINC4 ENSG00000184716 CDS Human protein_coding chr15:44087216 chr15:44087216 nonsynonymous SNV 0.076 1 21 hPsi_associated_SNPs_107016 0 0 1 0 0 chromatin 0 0.438718592286722 0 0 hPsi_site_5976 iPseU_CNN:0;iRNA_PseU:0 5977 chr3 4829763 4829763 1 + G T COAD 4829763 + 4829743 4829783 41 AACAAGGCAGCAAAATCAATGATTTCTTTCTGCGGTCTGAA AACAAGGCAGCAAAATCAATTATTTCTTTCTGCGGTCTGAA Direct Gain 0 0.947682513818866 0 0.993667960166931 prediction 0.895365027637732 Functional Gain - ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4829763 chr3:4829763 nonsynonymous SNV 0.991 5 21 hPsi_associated_SNPs_107017 0 0 0 0 1 Endoplasmic reticulum 0 0.438718709829423 0.987335920333862 0 hPsi_site_5977 iPseU_CNN:0.987335920333862;iRNA_PseU:0 5978 chr2 174231143 174231143 1 + G T UCEC 174231143 + 174231123 174231163 41 GTTATGGTGAAGAGGTCAGGGATGCTCTGCTGGATCCGGTA GTTATGGTGAAGAGGTCAGGTATGCTCTGCTGGATCCGGTA Direct Gain 0 0.947680580930065 0 0.704822480678558 prediction 0.89536116186013 Functional Gain - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174231143 chr2:174231143 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107018 0 0 1 0 1 Nucleus 0 0.438718594478311 0.409644961357116 0 hPsi_site_5978 iPseU_CNN:0.409644961357116;iRNA_PseU:0 5979 chr4 62942453 62942453 1 + C A rs77140830 62942453 - 62942433 62942473 41 AGAAACATTTATAAAATATTGATGTTTCCTTGAGACAAGGT AGAAACATTTATAAAATATTTATGTTTCCTTGAGACAAGGT Direct Gain 0 0.947680085368844 0 0.383440464735031 prediction 0.895360170737689 Functional Gain - ADGRL3-AS1 ENSG00000248692 ncRNA_intronic Human antisense chr4:62942453 chr4:62942453 . . 0 21 hPsi_associated_SNPs_107019 0 0 0 0 0 unknown 0 0.4386252023223 0 0 hPsi_site_5979 iPseU_CNN:0;iRNA_PseU:0 5980 chr17 65026641 65026641 1 + G T UCEC 65026641 + 65026621 65026661 41 GCAACACAGGTGACCCGAGTGACAAGCGGGACGAAGACAAA GCAACACAGGTGACCCGAGTTACAAGCGGGACGAAGACAAA Direct Gain 0 0.947674543814183 0 0.818654954433441 prediction 0.895349087628367 Functional Gain - CACNG4 ENSG00000075461 CDS Human protein_coding chr17:65026641 chr17:65026641 nonsynonymous SNV 0.882 4 21 hPsi_associated_SNPs_107020 0 0 0 0 1 Endoplasmic reticulum 0 0.425897017149215 0.637309908866882 0 hPsi_site_5980 iPseU_CNN:0.637309908866882;iRNA_PseU:0 5981 chr1 201184186 201184186 1 + C T UCEC 201184186 + 201184166 201184206 41 TTAAGCAAGACGGTCTCGTGCACAGCCTCTTCATCACGCAT TTAAGCAAGACGGTCTCGTGTACAGCCTCTTCATCACGCAT Direct Gain 0 0.947662716053042 0 0.943222641944885 prediction 0.895325432106084 Functional Gain - IGFN1 ENSG00000163395 CDS Human protein_coding chr1:201184186 chr1:201184186 nonsynonymous SNV 0.005 2 21 hPsi_associated_SNPs_107021 0 0 0 1 1 exosome 0 0.438713149470891 0.88644528388977 0 hPsi_site_5981 iPseU_CNN:0.88644528388977;iRNA_PseU:0 5982 chr19 54627194 54627194 1 + C A OV 54627194 - 54627174 54627214 41 TAGATGCGGTGCTTGGAGGCGTTCAGCTCCAGCGCCATGTC TAGATGCGGTGCTTGGAGGCTTTCAGCTCCAGCGCCATGTC Direct Gain 0 0.947656259626012 0 0.955308437347412 prediction 0.895312519252025 Functional Gain - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54627194 chr19:54627194 nonsynonymous SNV 0.953 1 21 hPsi_associated_SNPs_107022 0 0 0 0 0 Cytosol 0 0.438719517303513 0.910616874694824 0 hPsi_site_5982 iPseU_CNN:0.910616874694824;iRNA_PseU:0 5983 chr4 40104488 40104488 1 + G A BLCA 40104488 - 40104468 40104508 41 GCAAGTACCGGGCAGTAACTCACATCCTTCCCCTTAGTTGG GCAAGTACCGGGCAGTAACTTACATCCTTCCCCTTAGTTGG Direct Gain 0 0.947651321190047 0 0.999998807907104 prediction 0.895302642380093 Functional Gain - N4BP2 ENSG00000078177 CDS Human protein_coding chr4:40104488 chr4:40104488 synonymous SNV . 0 21 hPsi_associated_SNPs_107023 0 0 0 0 0 Ribosome 0 0.438718592994983 0.999997615814208 0 hPsi_site_5983 iPseU_CNN:0.999997615814208;iRNA_PseU:0 5984 chrX 73044970 73044970 1 + T A rs41303715 73044970 - 73044950 73044990 41 AGCTTGTTGTGGTCACCTATAATGTGCCAGATACCATGCTG AGCTTGTTGTGGTCACCTATTATGTGCCAGATACCATGCTG Direct Gain 0 0.947651165349407 0 0.996339678764343 prediction 0.895302330698815 Functional Gain - TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044970 chrX:73044970 . . 0 21 hPsi_associated_SNPs_107024 0 0 1 0 0 unknown 0 0.439738299006965 0.992679357528686 0 hPsi_site_5984 iPseU_CNN:0.992679357528686;iRNA_PseU:0 5985 chr11 66294133 66294133 1 + C A rs200577824 66294133 - 66294113 66294153 41 GTACGCTTCAGGATCTTGATGATCAGGCCACCACCTAGGGA GTACGCTTCAGGATCTTGATTATCAGGCCACCACCTAGGGA Direct Gain 0 0.947649133870791 0 0.993207931518555 prediction 0.895298267741583 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66294133 chr11:66294133 synonymous SNV . 0 21 hPsi_associated_SNPs_107025 1 0 0 0 0 membrane 0 0.435549252252367 0.98641586303711 0 hPsi_site_5985 iPseU_CNN:0.98641586303711;iRNA_PseU:0 5986 chr1 155912157 155912157 1 + C T BLCA 155912157 + 155912137 155912177 41 TTCATGGTGCCCTTGGGCGTCATCACCACCAGCTACCTGCT TTCATGGTGCCCTTGGGCGTTATCACCACCAGCTACCTGCT Direct Gain 0 0.947646334569826 0 0.953703999519348 prediction 0.895292669139651 Functional Gain - RXFP4 ENSG00000173080 CDS Human protein_coding chr1:155912157 chr1:155912157 synonymous SNV . 0 21 hPsi_associated_SNPs_107026 0 0 0 0 0 exosome 0 0.438719265689454 0.907407999038696 0 hPsi_site_5986 iPseU_CNN:0.907407999038696;iRNA_PseU:0 5987 chr14 24437993 24437993 1 + C T COAD 24437993 + 24437973 24438013 41 GAGCCAGAGGATTGTGCTGGCATCGTGTCTTTCCTGTGCTC GAGCCAGAGGATTGTGCTGGTATCGTGTCTTTCCTGTGCTC Direct Gain 0 0.947643797627753 0 0.999987483024597 prediction 0.895287595255507 Functional Gain - DHRS4 ENSG00000157326 CDS Human protein_coding chr14:24437993 chr14:24437993 nonsynonymous SNV 0.935 1 21 hPsi_associated_SNPs_107027 0 0 0 0 1 Ribosome 0 0.438879415442216 0.999974966049194 0 hPsi_site_5987 iPseU_CNN:0.999974966049194;iRNA_PseU:0 5988 chr17 48158685 48158685 1 + C T rs55893410 48158685 + 48158665 48158705 41 CCAATCCAGGATTACAGAGACTTTGACCGAGTCCGGGTAAA CCAATCCAGGATTACAGAGATTTTGACCGAGTCCGGGTAAA Direct Gain 0 0.947638494452552 0 0.993250250816345 prediction 0.895276988905104 Functional Gain - ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48158685 chr17:48158685 synonymous SNV . 0 21 hPsi_associated_SNPs_107028 0 0 0 0 2 Cytosol 0 0.438718592990598 0.98650050163269 0 hPsi_site_5988 iPseU_CNN:0.98650050163269;iRNA_PseU:0 5989 chr17 26854355 26854355 1 + C T rs547559375 26854355 + 26854335 26854375 41 CCCTTGCAGCATATGTACTGCTCCTCCCAGCCCCCCTTCCA CCCTTGCAGCATATGTACTGTTCCTCCCAGCCCCCCTTCCA Direct Gain 0 0.947636622133134 0 0.980634927749634 prediction 0.895273244266267 Functional Gain - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26854355 chr17:26854355 synonymous SNV . 0 21 hPsi_associated_SNPs_107029 0 0 0 0 1 exosome 0 0.438716712650989 0.961269855499268 0 hPsi_site_5989 iPseU_CNN:0.961269855499268;iRNA_PseU:0 5990 chr5 140744389 140744389 1 + G T LUSC 140744389 + 140744369 140744409 41 CGGGATGCGGATGTGGGTGTGAACTCTCTCCGGAGTTACCA CGGGATGCGGATGTGGGTGTTAACTCTCTCCGGAGTTACCA Direct Gain 0 0.947636440475244 0 0.992107331752777 prediction 0.895272880950488 Functional Gain - PCDHGA5 ENSG00000253485 CDS Human protein_coding chr5:140744389 chr5:140744389 synonymous SNV . 0 21 hPsi_associated_SNPs_107030 0 0 0 0 0 exosome 0 0.438718192479028 0.984214663505554 0 hPsi_site_5990 iPseU_CNN:0.984214663505554;iRNA_PseU:0 5991 chr6 160212043 160212043 1 + G A ESCA 160212043 - 160212023 160212063 41 GAATTCTGGGGCGACAGCTTCATTTTCCACAGGGTCCACTT GAATTCTGGGGCGACAGCTTTATTTTCCACAGGGTCCACTT Direct Gain 0 0.947634332008516 0 0.881957113742828 prediction 0.895268664017031 Functional Gain - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212043 chr6:160212043 nonsynonymous SNV 0.375 1 21 hPsi_associated_SNPs_107031 0 0 0 0 0 Cytosol 0 0.438715247191165 0.763914227485656 0 hPsi_site_5991 iPseU_CNN:0.763914227485656;iRNA_PseU:0 5992 chr1 24668758 24668758 1 + G T BLCA 24668758 + 24668738 24668778 41 GCCAGATCAAGATCTTCTGTGACAAGGTGGCTGGACTGGGC GCCAGATCAAGATCTTCTGTTACAAGGTGGCTGGACTGGGC Direct Gain 0 0.947627213911694 0 0.977940261363983 prediction 0.895254427823388 Functional Gain - GRHL3 ENSG00000158055 CDS Human protein_coding chr1:24668758 chr1:24668758 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_107032 0 0 0 0 1 Nucleus 0 0.438719270764628 0.955880522727966 0 hPsi_site_5992 iPseU_CNN:0.955880522727966;iRNA_PseU:0 5993 chr1 43896050 43896050 1 + G A LIHC 43896050 - 43896030 43896070 41 GCCCACATACCTTCTTCTCCCATAAGCTCAGCCTCTGAAAA GCCCACATACCTTCTTCTCCTATAAGCTCAGCCTCTGAAAA Direct Gain 0 0.947621485746844 0 0.0356274545192719 prediction 0.895242971493688 Functional Gain - SZT2 ENSG00000198198 CDS Human protein_coding chr1:43896050 chr1:43896050 nonsynonymous SNV 0.758 0 21 hPsi_associated_SNPs_107033 0 0 0 0 0 Cytosol 0 0.438726509900933 0 0 hPsi_site_5993 iPseU_CNN:0;iRNA_PseU:0 5994 chr1 247599290 247599290 1 + C T LUSC 247599290 + 247599270 247599310 41 AGGTTGGTCAGCTGCTGCCTCACATCAGCATGTTGTCAGGA AGGTTGGTCAGCTGCTGCCTTACATCAGCATGTTGTCAGGA Direct Gain 0 0.947616706740096 0 0.997363209724426 prediction 0.895233413480192 Functional Gain - NLRP3 ENSG00000162711 CDS Human protein_coding chr1:247599290 chr1:247599290 synonymous SNV . 0 21 hPsi_associated_SNPs_107034 0 0 0 0 1 Nucleus 0 0.439797323849564 0.994726419448852 0 hPsi_site_5994 iPseU_CNN:0.994726419448852;iRNA_PseU:0 5995 chr15 96875643 96875643 1 + C T LUSC 96875643 + 96875623 96875663 41 GAGGGCTGCAAGAGCTTCTTCAAGCGCAGCGTGCGGAGGAA GAGGGCTGCAAGAGCTTCTTTAAGCGCAGCGTGCGGAGGAA Direct Gain 0 0.94760940016108 0 0.990636110305786 prediction 0.89521880032216 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875643 chr15:96875643 synonymous SNV . 0 21 hPsi_associated_SNPs_107035 0 0 1 0 0 Cytoplasm 0 0.43871860126086 0.981272220611572 0 hPsi_site_5995 iPseU_CNN:0.981272220611572;iRNA_PseU:0 5996 chr4 173930422 173930422 1 + G A STAD 173930422 - 173930402 173930442 41 TTCATGAGACCATGTTCTTTCAGAACCATCCTTGACACAGA TTCATGAGACCATGTTCTTTTAGAACCATCCTTGACACAGA Direct Gain 0 0.947607573545038 0 0.974661827087402 prediction 0.895215147090076 Functional Gain - GALNTL6 ENSG00000174473 CDS Human protein_coding chr4:173930422 chr4:173930422 nonsynonymous SNV 0.969 0 21 hPsi_associated_SNPs_107036 0 0 0 0 0 chromatin 0 0.438707206208984 0.949323654174804 0 hPsi_site_5996 iPseU_CNN:0.949323654174804;iRNA_PseU:0 5997 chr1 164776902 164776902 1 + C T LUSC 164776902 + 164776882 164776922 41 TTAGCCAAGAAGTGTGGCATCACAGTCTCCCAGGTAAGCAG TTAGCCAAGAAGTGTGGCATTACAGTCTCCCAGGTAAGCAG Direct Gain 0 0.947606150444754 0 0.00129193067550659 prediction 0.895212300889508 Functional Gain - PBX1 ENSG00000185630 CDS Human protein_coding chr1:164776902 chr1:164776902 synonymous SNV . 0 21 hPsi_associated_SNPs_107037 0 0 0 0 1 Ribosome 0 0.438718590658482 0 0 hPsi_site_5997 iPseU_CNN:0;iRNA_PseU:0 5998 chrX 23019971 23019971 1 + A T LUSC 23019971 + 23019951 23019991 41 GTTCCGGAAGATCTTGTAGTAATGGCTGAGCAATACAAGTT GTTCCGGAAGATCTTGTAGTTATGGCTGAGCAATACAAGTT Direct Gain 0 0.947600880044214 0 0.998616933822632 prediction 0.895201760088428 Functional Gain - DDX53 ENSG00000184735 CDS Human protein_coding chrX:23019971 chrX:23019971 synonymous SNV . 0 21 hPsi_associated_SNPs_107038 0 0 0 0 0 unknown 0 0.438717284741438 0.997233867645264 0 hPsi_site_5998 iPseU_CNN:0.997233867645264;iRNA_PseU:0 5999 chr12 122691336 122691336 1 + G A OV 122691336 - 122691316 122691356 41 GAAGTCCCACTGGAGGATGTCATCAAACTCCCTACTCTCAT GAAGTCCCACTGGAGGATGTTATCAAACTCCCTACTCTCAT Direct Gain 0 0.947599965474404 0 0.999916136264801 prediction 0.895199930948808 Functional Gain - B3GNT4 ENSG00000176383 CDS Human protein_coding chr12:122691336 chr12:122691336 nonsynonymous SNV 0.980 4 21 hPsi_associated_SNPs_107039 0 0 1 0 0 chromatin 0 0.438545525938176 0.999832272529602 0 hPsi_site_5999 iPseU_CNN:0.999832272529602;iRNA_PseU:0 6000 chr19 46027912 46027912 1 + G A CESC 46027912 - 46027892 46027932 41 CCCCCCCAAGTTACCTGTTTCACCCTCTGTAGGTCCGAGTA CCCCCCCAAGTTACCTGTTTTACCCTCTGTAGGTCCGAGTA Direct Gain 0 0.94759579413041 0 0.987928509712219 prediction 0.895191588260819 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46027912 chr19:46027912 synonymous SNV . 0 21 hPsi_associated_SNPs_107040 0 0 0 0 0 Ribosome 0 0.438718592995102 0.975857019424438 0 hPsi_site_6000 iPseU_CNN:0.975857019424438;iRNA_PseU:0 6001 chr9 6893122 6893122 1 + A T COAD 6893122 + 6893102 6893142 41 AGGAGGCTGGAGAATTCATGATCACTTTCCCATATGGCTAC AGGAGGCTGGAGAATTCATGTTCACTTTCCCATATGGCTAC Direct Gain 0 0.947581833446116 0 0.290945172309875 prediction 0.895163666892231 Functional Gain - KDM4C ENSG00000107077 CDS Human protein_coding chr9:6893122 chr9:6893122 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107041 0 0 1 0 1 Nucleus 0 0.438718563360149 0 0 hPsi_site_6001 iPseU_CNN:0;iRNA_PseU:0 6002 chr13 36220454 36220454 1 + C T SKCM 36220454 + 36220434 36220474 41 ATCTCAGTTGCTTATTGAGCCACATCCGCCTCGGAGCTCTG ATCTCAGTTGCTTATTGAGCTACATCCGCCTCGGAGCTCTG Direct Gain 0 0.947578908852669 0 0.832661151885986 prediction 0.895157817705339 Functional Gain - NBEA ENSG00000172915 CDS Human protein_coding chr13:36220454 chr13:36220454 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107042 0 0 1 0 2 Nucleus 0 0.439215815832553 0.665322303771972 0 hPsi_site_6002 iPseU_CNN:0.665322303771972;iRNA_PseU:0 6003 chr11 14287206 14287206 1 + C A UCEC 14287206 - 14287186 14287226 41 GGATGAACATTGCATGCTCTGATCTCCTTCTTGTCTTTGCA GGATGAACATTGCATGCTCTTATCTCCTTCTTGTCTTTGCA Direct Gain 0 0.947578553217606 0 0.997897267341614 prediction 0.895157106435213 Functional Gain - SPON1 ENSG00000152268 ncRNA_exonic Human other chr11:14287206 chr11:14287206 . . 0 21 hPsi_associated_SNPs_107043 0 0 0 0 0 chromatin 0 0.438706401861186 0.995794534683228 0 hPsi_site_6003 iPseU_CNN:0.995794534683228;iRNA_PseU:0 6004 chr7 142566461 142566461 1 + C A COAD 142566461 - 142566441 142566481 41 TCCAGGGGGCCAAGCTCCATGAACTCCGTCAGCACCATGAG TCCAGGGGGCCAAGCTCCATTAACTCCGTCAGCACCATGAG Direct Gain 0 0.947575865599475 0 0.998011946678162 prediction 0.895151731198951 Functional Gain - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142566461 chr7:142566461 nonsynonymous SNV 0.992 0 21 hPsi_associated_SNPs_107044 0 0 0 0 0 Endoplasmic reticulum 0 0.438718909206343 0.996023893356324 0 hPsi_site_6004 iPseU_CNN:0.996023893356324;iRNA_PseU:0 6005 chr10 35819157 35819157 1 + G A UCEC 35819157 - 35819137 35819177 41 ACTCACCAGGGTGACGATGGCACATTCAGCCGTCAGCTGAG ACTCACCAGGGTGACGATGGTACATTCAGCCGTCAGCTGAG Direct Gain 0 0.947575629503315 0 0.999964118003845 prediction 0.895151259006629 Functional Gain - CCNY ENSG00000108100 CDS Human protein_coding chr10:35819157 chr10:35819157 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107045 0 0 0 0 0 Cytosol 0 0.438702318199739 0.99992823600769 0 hPsi_site_6005 iPseU_CNN:0.99992823600769;iRNA_PseU:0 6006 chrX 135429793 135429793 1 + C T GBM 135429793 + 135429773 135429813 41 AGACCACAAAAATTTCCAGTCACCAAACACATTCGCCTTCA AGACCACAAAAATTTCCAGTTACCAAACACATTCGCCTTCA Direct Gain 0 0.947559577628157 0 0.998929142951965 prediction 0.895119155256314 Functional Gain - ADGRG4 ENSG00000156920 CDS Human protein_coding chrX:135429793 chrX:135429793 nonsynonymous SNV 0.934 1 21 hPsi_associated_SNPs_107046 0 0 0 0 0 exosome 0 0.438878927820161 0.99785828590393 0 hPsi_site_6006 iPseU_CNN:0.99785828590393;iRNA_PseU:0 6007 chr12 53694033 53694033 1 + G A COAD 53694033 - 53694013 53694053 41 AACCTACCTCTGGTGATGGTCATATCGGTGTCTCCGAGGGT AACCTACCTCTGGTGATGGTTATATCGGTGTCTCCGAGGGT Direct Gain 0 0.947552842507062 0 0.999267160892487 prediction 0.895105685014124 Functional Gain - C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53694033 chr12:53694033 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107047 0 0 0 0 0 cytosol 0 0.438045715944169 0.998534321784974 0 hPsi_site_6007 iPseU_CNN:0.998534321784974;iRNA_PseU:0 6008 chr11 118374917 118374917 1 + C A GBM 118374917 - 118374897 118374937 41 TGGCCAACAGAACTCTTAGTGACATGTTCTTTCTCCCCAGC TGGCCAACAGAACTCTTAGTTACATGTTCTTTCTCCCCAGC Direct Gain 0 0.947546148709784 0 0.989915609359741 prediction 0.895092297419568 Functional Gain - KMT2A ENSG00000118058 CDS Human protein_coding chr11:118374917 chr11:118374917 synonymous SNV . 0 21 hPsi_associated_SNPs_107048 0 0 0 0 0 Cytosol 0 0.438830333524431 0.979831218719482 0 hPsi_site_6008 iPseU_CNN:0.979831218719482;iRNA_PseU:0 6009 chr10 105514028 105514028 1 + G A rs56270609 105514028 - 105514008 105514048 41 GGGTTACAGCGAGCTATGATCATGCCACTGCACTCCATCCT GGGTTACAGCGAGCTATGATTATGCCACTGCACTCCATCCT Direct Gain 0 0.947541825817442 0 0.99319314956665 prediction 0.895083651634884 Functional Gain - SH3PXD2A-AS1 ENSG00000107957 intronic Human protein_coding chr10:105514028 chr10:105514028 . . 0 21 hPsi_associated_SNPs_107049 0 0 0 0 0 unknown 0 0.437269690495695 0.9863862991333 0 hPsi_site_6009 iPseU_CNN:0.9863862991333;iRNA_PseU:0 6010 chr19 5641853 5641853 1 + G A COAD 5641853 - 5641833 5641873 41 ATCAGCATCATCGTCTTCGACACAATCTGCAACGCTTCCAT ATCAGCATCATCGTCTTCGATACAATCTGCAACGCTTCCAT Direct Gain 0 0.947534876644213 0 0.999887228012085 prediction 0.895069753288426 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5641853 chr19:5641853 nonsynonymous SNV 0.320 0 21 hPsi_associated_SNPs_107050 0 0 0 0 0 chromatin 0 0.438950726044252 0.99977445602417 0 hPsi_site_6010 iPseU_CNN:0.99977445602417;iRNA_PseU:0 6011 chr21 48073237 48073237 1 + G A rs569066799 48073237 - 48073217 48073257 41 TATTGGTATGAAATTAAATTCTTACTGGCCACGTGCCTGTT TATTGGTATGAAATTAAATTTTTACTGGCCACGTGCCTGTT Direct Gain 0 0.947526234611317 0 0.83268404006958 prediction 0.895052469222634 Functional Gain - PRMT2 ENSG00000160310 intronic Human protein_coding chr21:48073237 chr21:48073237 . . 0 21 hPsi_associated_SNPs_107051 0 0 0 0 0 Cytosol 0 0.438801449951381 0.66536808013916 0 hPsi_site_6011 iPseU_CNN:0.66536808013916;iRNA_PseU:0 6012 chr6 10704853 10704853 1 + G T UCEC 10704853 + 10704833 10704873 41 TTAGTGGCACCATCACAAATGAAAAGAGAATTTCCTCTGTT TTAGTGGCACCATCACAAATTAAAAGAGAATTTCCTCTGTT Direct Gain 0 0.947525944720197 0 0.999585151672363 prediction 0.895051889440393 Functional Gain - PAK1IP1 ENSG00000111845 CDS Human protein_coding chr6:10704853 chr6:10704853 stopgain 0.987 0 21 hPsi_associated_SNPs_107052 0 0 1 0 1 Ribosome 0 0.438707232011378 0.999170303344726 0 hPsi_site_6012 iPseU_CNN:0.999170303344726;iRNA_PseU:0 6013 chr7 143826719 143826719 1 + G A SKCM 143826719 - 143826699 143826739 41 ACAGAAGAAGTGGTTGATTTCATGAGGCCCGCAGAAGGGCA ACAGAAGAAGTGGTTGATTTTATGAGGCCCGCAGAAGGGCA Direct Gain 0 0.947512742516095 0 0.978378236293793 prediction 0.89502548503219 Functional Gain - OR2A14 ENSG00000221938 CDS Human protein_coding chr7:143826719 chr7:143826719 nonsynonymous SNV 0.134 0 21 hPsi_associated_SNPs_107053 0 0 0 0 0 unknown 0 0.438718132488437 0.956756472587586 0 hPsi_site_6013 iPseU_CNN:0.956756472587586;iRNA_PseU:0 6014 chr15 67158290 67158290 1 + C T rs28532310 67158290 + 67158270 67158310 41 TAGCCCCAACCTCATTCATTCACTTCCAGAATGGCAGGTGC TAGCCCCAACCTCATTCATTTACTTCCAGAATGGCAGGTGC Direct Gain 0 0.947511307953861 0 0.928083419799805 prediction 0.895022615907723 Functional Gain - SMAD6;LINC02206 ENSG00000270490;ENSG00000259437 intergenic Human other chr15:67158290 chr15:67158290 . . 0 21 hPsi_associated_SNPs_107054 0 0 1 0 0 unknown 0 0.438668192019907 0.85616683959961 0 hPsi_site_6014 iPseU_CNN:0.85616683959961;iRNA_PseU:0 6015 chr20 35234390 35234390 1 + G A rs551256031 35234390 - 35234370 35234410 41 GCCCCGTTGGCCAGCTGCGGCTGAGGCGGCTCCTCCTTCCG GCCCCGTTGGCCAGCTGCGGTTGAGGCGGCTCCTCCTTCCG Direct Gain 0 0.947503852843462 0 0.463007360696793 prediction 0.895007705686925 Functional Gain - C20orf24 ENSG00000101084 CDS Human protein_coding chr20:35234390 chr20:35234390 synonymous SNV . 0 21 hPsi_associated_SNPs_107055 0 0 0 0 0 Ribosome 0 0.43871677881172 0 0 hPsi_site_6015 iPseU_CNN:0;iRNA_PseU:0 6016 chr2 186654084 186654084 1 + G A CESC 186654084 - 186654064 186654104 41 GGAAAGCAAGATTTCTTTTTCACGTTCACATTGTTCAACAA GGAAAGCAAGATTTCTTTTTTACGTTCACATTGTTCAACAA Direct Gain 0 0.947502170228812 0 0.983678340911865 prediction 0.895004340457625 Functional Gain - FSIP2 ENSG00000188738 CDS Human protein_coding chr2:186654084 chr2:186654084 nonsynonymous SNV 0.236 0 21 hPsi_associated_SNPs_107056 0 0 0 0 0 chromatin 0 0.438907787112752 0.96735668182373 0 hPsi_site_6016 iPseU_CNN:0.96735668182373;iRNA_PseU:0 6017 chr2 220399924 220399924 1 + C T SKCM 220399924 + 220399904 220399944 41 GGGGGCCCTGAGGGCCCGTGCTTCTGCCCCACCCCCTGCAA GGGGGCCCTGAGGGCCCGTGTTTCTGCCCCACCCCCTGCAA Direct Gain 0 0.947501983476484 0 0.442786902189255 prediction 0.895003966952967 Functional Gain - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220399924 chr2:220399924 synonymous SNV . 0 21 hPsi_associated_SNPs_107057 0 0 1 0 1 chromatin 0 0.438718620493735 0 0 hPsi_site_6017 iPseU_CNN:0;iRNA_PseU:0 6018 chr14 20825922 20825922 1 + T A LUSC 20825922 - 20825902 20825942 41 GGAAATTAAACTGAACCTTTAAAAGGTACCGCATACGGACC GGAAATTAAACTGAACCTTTTAAAGGTACCGCATACGGACC Direct Gain 0 0.947497250213858 0 0.999866127967834 prediction 0.894994500427716 Functional Gain - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20825922 chr14:20825922 stopgain 0.998 1 21 hPsi_associated_SNPs_107058 0 0 0 0 0 Cytosol 0 0.438718592999337 0.999732255935668 0 hPsi_site_6018 iPseU_CNN:0.999732255935668;iRNA_PseU:0 6019 chr19 36912860 36912860 1 + G A rs10426014 36912860 - 36912840 36912880 41 GGCAGGAAGAGCGTGGCGCGCACCCGGCCCGCGCGCACCGA GGCAGGAAGAGCGTGGCGCGTACCCGGCCCGCGCGCACCGA Direct Gain 0 0.947492426935209 0 0.9159095287323 prediction 0.894984853870418 Functional Gain - LOC644189 ENSG00000267142 ncRNA_exonic Human processed_pseudogene chr19:36912860 chr19:36912860 . . 0 21 hPsi_associated_SNPs_107059 0 0 0 0 0 unknown 0 0.438717631703982 0.8318190574646 0 hPsi_site_6019 iPseU_CNN:0.8318190574646;iRNA_PseU:0 6020 chr18 77805847 77805847 1 + G A BLCA 77805847 - 77805827 77805867 41 AATCTGCTTGTTGAGCGCCTCATGATCGATCCCACACAGAC AATCTGCTTGTTGAGCGCCTTATGATCGATCCCACACAGAC Direct Gain 0 0.947485533666964 0 0.418785929679871 prediction 0.894971067333927 Functional Gain - RBFA ENSG00000101546 CDS Human protein_coding chr18:77805847 chr18:77805847 nonsynonymous SNV 0.274 1 21 hPsi_associated_SNPs_107060 0 0 0 0 0 Ribosome 0 0.43869220285214 0 0 hPsi_site_6020 iPseU_CNN:0;iRNA_PseU:0 6021 chr11 121420743 121420743 1 + C T LUAD 121420743 + 121420723 121420763 41 TCCGGAATTTTCTGGAAAGTCATACTCCCCTCCTGTGCCTT TCCGGAATTTTCTGGAAAGTTATACTCCCCTCCTGTGCCTT Direct Gain 0 0.947484128496757 0 0.999990820884705 prediction 0.894968256993514 Functional Gain - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121420743 chr11:121420743 nonsynonymous SNV 0.984 1 21 hPsi_associated_SNPs_107061 0 0 1 0 1 Nucleus 0 0.43871868460782 0.99998164176941 0 hPsi_site_6021 iPseU_CNN:0.99998164176941;iRNA_PseU:0 6022 chr6 150240387 150240387 1 + G A OV 150240387 - 150240367 150240407 41 GGCAGTGGATCTTGGCAGCTCAGTTTCGATGGACAGATCTT GGCAGTGGATCTTGGCAGCTTAGTTTCGATGGACAGATCTT Direct Gain 0 0.947478741384007 0 0.998227477073669 prediction 0.894957482768013 Functional Gain - RAET1G ENSG00000203722 CDS Human protein_coding chr6:150240387 chr6:150240387 synonymous SNV . 0 21 hPsi_associated_SNPs_107062 0 0 0 0 1 exosome 0 0.438718329435889 0.996454954147338 0 hPsi_site_6022 iPseU_CNN:0.996454954147338;iRNA_PseU:0 6023 chr1 248039286 248039286 1 + G A SKCM 248039286 - 248039266 248039306 41 GGTTGTTGGGGACATCCCTCCATGGTTCTCCATCCTGCACA GGTTGTTGGGGACATCCCTCTATGGTTCTCCATCCTGCACA Direct Gain 0 0.947477270577009 0 0.425660014152527 prediction 0.894954541154018 Functional Gain - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248039286 chr1:248039286 stopgain 0.052 0 21 hPsi_associated_SNPs_107063 0 0 0 0 0 Cytosol 0 0.438205858884154 0 0 hPsi_site_6023 iPseU_CNN:0;iRNA_PseU:0 6024 chr16 25238433 25238433 1 + G T LUSC 25238433 + 25238413 25238453 41 GAATCCCGCCCGTGCTTTTGGACCTGCGGTGGTGGCCAACC GAATCCCGCCCGTGCTTTTGTACCTGCGGTGGTGGCCAACC Direct Gain 0 0.947470140297978 0 0.275597542524338 prediction 0.894940280595957 Functional Gain - AQP8 ENSG00000103375 CDS Human protein_coding chr16:25238433 chr16:25238433 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107064 0 0 0 0 2 Ribosome 0 0.43871859332401 0 0 hPsi_site_6024 iPseU_CNN:0;iRNA_PseU:0 6025 chr19 52090944 52090944 1 + C T UCEC 52090944 + 52090924 52090964 41 ATGTGTGTATCGAATGCGGGCAGGCCTTCATCCAGAAGGCA ATGTGTGTATCGAATGCGGGTAGGCCTTCATCCAGAAGGCA Direct Gain 0 0.947468306144247 0 0.99809730052948 prediction 0.894936612288493 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090944 chr19:52090944 stopgain 0.967 0 21 hPsi_associated_SNPs_107065 0 0 0 0 0 chromatin 0 0.438703274604315 0.99619460105896 0 hPsi_site_6025 iPseU_CNN:0.99619460105896;iRNA_PseU:0 6026 chr19 54656706 54656706 1 + G T UCEC 54656706 + 54656686 54656726 41 TACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTTCTA TACCAGCGCCTGTCGACCGATACACTCTTCTTCATCTTCTA Direct Gain 0 0.947467783990677 0 0.97684633731842 prediction 0.894935567981353 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656706 chr19:54656706 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_107066 0 0 1 0 2 Ribosome 0 0.438718464810868 0.95369267463684 0 hPsi_site_6026 iPseU_CNN:0.95369267463684;iRNA_PseU:0 6027 chr9 140638462 140638462 1 + G A UCEC 140638462 - 140638442 140638482 41 GAACGCGGCCGCCTGCTCTGCACCATGGCCGTCGTCCTCCT GAACGCGGCCGCCTGCTCTGTACCATGGCCGTCGTCCTCCT Direct Gain 0 0.947466412551222 0 0.999744415283203 prediction 0.894932825102443 Functional Gain - EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140638462 chr9:140638462 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_107067 0 0 0 0 0 chromatin 0 0.438658053547168 0.999488830566406 0 hPsi_site_6027 iPseU_CNN:0.999488830566406;iRNA_PseU:0 6028 chr12 117289418 117289418 1 + G A rs112903394 117289418 - 117289398 117289438 41 TGAGTAGCTGGGATTACAGGCACCCGCCACCGCGCCCGGCT TGAGTAGCTGGGATTACAGGTACCCGCCACCGCGCCCGGCT Direct Gain 0 0.947465333650644 0 0.998964905738831 prediction 0.894930667301288 Functional Gain - RNFT2 ENSG00000135119 UTR3 Human protein_coding chr12:117289418 chr12:117289418 . . 0 21 hPsi_associated_SNPs_107068 0 0 0 0 0 Ribosome 0 0.438718592995227 0.997929811477662 0 hPsi_site_6028 iPseU_CNN:0.997929811477662;iRNA_PseU:0 6029 chr2 113832328 113832328 1 + C T SKCM 113832328 + 113832308 113832348 41 TGCATACTTCCTAACAGAGGCTTGGCCCGCACCAAGGTCCC TGCATACTTCCTAACAGAGGTTTGGCCCGCACCAAGGTCCC Direct Gain 0 0.94746379493073 0 0.999944925308228 prediction 0.89492758986146 Functional Gain - IL1F10 ENSG00000136697 CDS Human protein_coding chr2:113832328 chr2:113832328 synonymous SNV . 0 21 hPsi_associated_SNPs_107069 0 0 0 0 2 unknown 0 0.438718592995098 0.999889850616456 0 hPsi_site_6029 iPseU_CNN:0.999889850616456;iRNA_PseU:0 6030 chr17 66040016 66040016 1 + G A CESC 66040016 - 66039996 66040036 41 GCGAGTGCTCCTGCATCAATCACAACCTGAGTCTGTTCATC GCGAGTGCTCCTGCATCAATTACAACCTGAGTCTGTTCATC Direct Gain 0 0.947459592182961 0 0.999980211257935 prediction 0.894919184365922 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66040016 chr17:66040016 synonymous SNV . 0 21 hPsi_associated_SNPs_107070 0 0 0 0 0 Cytosol 0 0.434840687108904 0.99996042251587 0 hPsi_site_6030 iPseU_CNN:0.99996042251587;iRNA_PseU:0 6031 chr13 58209207 58209207 1 + G A UCEC 58209207 - 58209187 58209227 41 AGTGGCAGGGGTCTCGCTTGCATTAGTCCCTTGTCCGGTGA AGTGGCAGGGGTCTCGCTTGTATTAGTCCCTTGTCCGGTGA Direct Gain 0 0.947459009279041 0 0.999489307403564 prediction 0.894918018558081 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58209207 chr13:58209207 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_107071 0 0 0 0 0 exosome 0 0.438704010196489 0.998978614807128 0 hPsi_site_6031 iPseU_CNN:0.998978614807128;iRNA_PseU:0 6032 chr4 169060698 169060698 1 + G A SKCM 169060698 - 169060678 169060718 41 CTCTGGTATGCCTCTGCAATCATCATCCTTTGTGCATTGCA CTCTGGTATGCCTCTGCAATTATCATCCTTTGTGCATTGCA Direct Gain 0 0.947455229012346 0 0.53121691942215 prediction 0.894910458024692 Functional Gain - ANXA10 ENSG00000109511 CDS Human protein_coding chr4:169060698 chr4:169060698 nonsynonymous SNV 0.030 1 21 hPsi_associated_SNPs_107072 0 0 0 0 0 exosome 0 0.438706842867782 0.0624338388443 0 hPsi_site_6032 iPseU_CNN:0.0624338388443;iRNA_PseU:0 6033 chr3 38126934 38126934 1 + G T GBM 38126934 + 38126914 38126954 41 CGGAGGCCGCCCCCCGTGCTGACATGTGAGTGTGCACCGTA CGGAGGCCGCCCCCCGTGCTTACATGTGAGTGTGCACCGTA Direct Gain 0 0.94745081018249 0 0.972926616668701 prediction 0.894901620364979 Functional Gain - DLEC1 ENSG00000008226 CDS Human protein_coding chr3:38126934 chr3:38126934 synonymous SNV . 0 21 hPsi_associated_SNPs_107073 0 0 0 0 1 chromatin 0 0.438911486337467 0.945853233337402 0 hPsi_site_6033 iPseU_CNN:0.945853233337402;iRNA_PseU:0 6034 chr2 204137404 204137404 1 + G A STAD 204137404 - 204137384 204137424 41 TCTAGAAAGCCTTTTCCAATCTCAGACCAAACCTGAAAATA TCTAGAAAGCCTTTTCCAATTTCAGACCAAACCTGAAAATA Direct Gain 0 0.947450056227044 0 0.608443140983582 prediction 0.894900112454087 Functional Gain - CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204137404 chr2:204137404 synonymous SNV . 0 21 hPsi_associated_SNPs_107074 0 0 0 0 0 Nucleus 0 0.440268081492569 0.216886281967164 0 hPsi_site_6034 iPseU_CNN:0.216886281967164;iRNA_PseU:0 6035 chr16 70499044 70499044 1 + G T BLCA 70499044 + 70499024 70499064 41 TGCAGGTGGTCACATCCGATGTCCTGCACTCGGCCTGGATC TGCAGGTGGTCACATCCGATTTCCTGCACTCGGCCTGGATC Direct Gain 0 0.947449884833505 0 0.995309472084045 prediction 0.89489976966701 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70499044 chr16:70499044 nonsynonymous SNV 0.564 4 21 hPsi_associated_SNPs_107075 0 0 1 0 2 chromatin 0 0.438845276873611 0.99061894416809 0 hPsi_site_6035 iPseU_CNN:0.99061894416809;iRNA_PseU:0 6036 chr2 185802184 185802184 1 + C A rs61739287 185802184 - 185802164 185802204 41 TTACAGTGGTTTTTAGAACTGATAGTATCATAAGTGTTGTA TTACAGTGGTTTTTAGAACTTATAGTATCATAAGTGTTGTA Direct Gain 0 0.947447762679419 0 0.994428277015686 prediction 0.894895525358837 Functional Gain - ZNF804A ENSG00000170396 CDS Human protein_coding chr2:185802184 chr2:185802184 synonymous SNV . 0 21 hPsi_associated_SNPs_107076 0 0 0 0 0 nucleoplasm 0 0.438978022758395 0.988856554031372 0 hPsi_site_6036 iPseU_CNN:0.988856554031372;iRNA_PseU:0 6037 chr4 173150844 173150844 1 + C T LUSC 173150844 + 173150824 173150864 41 GGGAGATGGGCAATTCTATTCATGGACAGATGGTTTGAGAA GGGAGATGGGCAATTCTATTTATGGACAGATGGTTTGAGAA Direct Gain 0 0.947447242931885 0 0.541166424751282 prediction 0.89489448586377 Functional Gain - GALNTL6 ENSG00000174473 CDS Human protein_coding chr4:173150844 chr4:173150844 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107077 0 0 0 0 2 chromatin 0 0.439393814465284 0.0823328495025639 0 hPsi_site_6037 iPseU_CNN:0.0823328495025639;iRNA_PseU:0 6038 chr3 150340211 150340211 1 + G A COAD 150340211 - 150340191 150340231 41 TACCGCTGGCTAATAACCCGCATGTACTCCTCAAACACCCG TACCGCTGGCTAATAACCCGTATGTACTCCTCAAACACCCG Direct Gain 0 0.947445338241285 0 0.998384594917297 prediction 0.89489067648257 Functional Gain - SELENOT ENSG00000198843 CDS Human protein_coding chr3:150340211 chr3:150340211 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107078 0 0 0 0 0 unknown 0 0.438710310572629 0.996769189834594 0 hPsi_site_6038 iPseU_CNN:0.996769189834594;iRNA_PseU:0 6039 chr2 27804570 27804570 1 + C T CESC 27804570 + 27804550 27804590 41 GTCCCTCTGAGAGAAGACATCACAGTCCCTCTAAGAGAAGC GTCCCTCTGAGAGAAGACATTACAGTCCCTCTAAGAGAAGC Direct Gain 0 0.947444972321428 0 0.376719385385513 prediction 0.894889944642856 Functional Gain - C2orf16 ENSG00000221843 CDS Human protein_coding chr2:27804570 chr2:27804570 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107079 0 0 0 0 0 chromatin 0 0.438724139533214 0 0 hPsi_site_6039 iPseU_CNN:0;iRNA_PseU:0 6040 chr15 67457307 67457307 1 + G A CESC 67457307 - 67457287 67457327 41 GGTGGCTGTGCAGGTCTGGCCATCGCCACAGGCGGCAGTAG GGTGGCTGTGCAGGTCTGGCTATCGCCACAGGCGGCAGTAG Direct Gain 0 0.947442787770705 0 0.971392035484314 prediction 0.89488557554141 Functional Gain - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67457307 chr15:67457307 stopgain 0.999 1 21 hPsi_associated_SNPs_107080 0 0 0 0 0 Cytosol 0 0.438718567602826 0.942784070968628 0 hPsi_site_6040 iPseU_CNN:0.942784070968628;iRNA_PseU:0 6041 chr21 45564871 45564871 1 + C T rs116773015 45564871 + 45564851 45564891 41 GCTAGGCGCCAGGACTTGGCCTCACCCTCTGGCTGAGGAGC GCTAGGCGCCAGGACTTGGCTTCACCCTCTGGCTGAGGAGC Direct Gain 0 0.947441951617467 0 0.00407227873802185 prediction 0.894883903234934 Functional Gain - C21orf33 ENSG00000160221 UTR3 Human protein_coding chr21:45564871 chr21:45564871 . . 0 21 hPsi_associated_SNPs_107081 0 0 1 0 0 Ribosome 0 0.438718598070895 0 0 hPsi_site_6041 iPseU_CNN:0;iRNA_PseU:0 6042 chrX 140984987 140984987 1 + G T LUAD 140984987 + 140984967 140985007 41 GAGCCTGTCACAAAGGCAGAGATGCTGACGACTGTCATCAA GAGCCTGTCACAAAGGCAGATATGCTGACGACTGTCATCAA Direct Gain 0 0.947434535904957 0 0.919421315193176 prediction 0.894869071809915 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140984987 chrX:140984987 nonsynonymous SNV 0.040 0 21 hPsi_associated_SNPs_107082 0 0 0 0 0 exosome 0 0.438755340407563 0.838842630386352 0 hPsi_site_6042 iPseU_CNN:0.838842630386352;iRNA_PseU:0 6043 chr22 31499964 31499964 1 + G A rs367927204 31499964 - 31499944 31499984 41 CCTGGAGACCACCTTCTGCTCACCCTCACTGGCACACTCCA CCTGGAGACCACCTTCTGCTTACCCTCACTGGCACACTCCA Direct Gain 0 0.94743103282777 0 0.959527611732483 prediction 0.894862065655541 Functional Gain - SMTN ENSG00000183963 intronic Human protein_coding chr22:31499964 chr22:31499964 . . 0 21 hPsi_associated_SNPs_107083 0 0 0 0 0 Cytosol 0 0.436807678645658 0.919055223464966 0 hPsi_site_6043 iPseU_CNN:0.919055223464966;iRNA_PseU:0 6044 chr1 212799107 212799107 1 + G A BLCA 212799107 - 212799087 212799127 41 GAATTGGCTGCTGCCACACTCAAGGCACCTGCTACGGTGCC GAATTGGCTGCTGCCACACTTAAGGCACCTGCTACGGTGCC Direct Gain 0 0.947430930729577 0 0.981837749481201 prediction 0.894861861459154 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212799107 chr1:212799107 synonymous SNV . 0 21 hPsi_associated_SNPs_107084 0 0 1 0 0 exosome 0 0.438718590845105 0.963675498962402 0 hPsi_site_6044 iPseU_CNN:0.963675498962402;iRNA_PseU:0 6045 chr11 1955863 1955863 1 + C T SKCM 1955863 + 1955843 1955883 41 GCAAGCCGCTCAACATCGATCACCTTGGTGAAGACAAACTG GCAAGCCGCTCAACATCGATTACCTTGGTGAAGACAAACTG Direct Gain 0 0.947417905365976 0 0.997897386550903 prediction 0.894835810731953 Functional Gain - TNNT3 ENSG00000130595 CDS Human protein_coding chr11:1955863 chr11:1955863 nonsynonymous SNV 0.042 4 21 hPsi_associated_SNPs_107085 0 0 0 0 2 exosome 0 0.439265015210254 0.995794773101806 0 hPsi_site_6045 iPseU_CNN:0.995794773101806;iRNA_PseU:0 6046 chr12 93965611 93965611 1 + C A rs530629473 93965611 - 93965591 93965631 41 ATGGGGCGGGGGGGTGGGGGGAAAAGGGGAGGTGGGAGGGG ATGGGGCGGGGGGGTGGGGGTAAAAGGGGAGGTGGGAGGGG Direct Gain 0 0.947414046064005 0 0.0108918249607086 prediction 0.894828092128011 Functional Gain - SOCS2 ENSG00000120833 UTR5 Human protein_coding chr12:93965611 chr12:93965611 . . 0 21 hPsi_associated_SNPs_107086 0 0 0 0 0 Ribosome 0 0.438718592980556 0 0 hPsi_site_6046 iPseU_CNN:0;iRNA_PseU:0 6047 chr10 61006281 61006281 1 + G A rs529635532 61006281 - 61006261 61006301 41 GTAAAAGGTCAACATTTTCTCTCATGTACCAACCTTGTTTG GTAAAAGGTCAACATTTTCTTTCATGTACCAACCTTGTTTG Direct Gain 0 0.947413476119233 0 0.4310242831707 prediction 0.894826952238465 Functional Gain - FAM13C;PHYHIPL ENSG00000148541;ENSG00000165443 UTR3 Human other chr10:61006281 chr10:61006281 . . 0 21 hPsi_associated_SNPs_107087 0 0 1 1 0 unknown 0 0.438486351848172 0 0 hPsi_site_6047 iPseU_CNN:0;iRNA_PseU:0 6048 chrX 102632356 102632356 1 + C T rs747974052 102632356 + 102632336 102632376 41 CAGAGCACCAAGCATTCAGTCTCTCTCCTTGCCTTTGTCTT CAGAGCACCAAGCATTCAGTTTCTCTCCTTGCCTTTGTCTT Direct Gain 0 0.947407727503806 0 0.912191987037659 prediction 0.894815455007611 Functional Gain - BEX3 ENSG00000166681 UTR5 Human protein_coding chrX:102632356 chrX:102632356 . . 0 21 hPsi_associated_SNPs_107088 0 0 1 0 0 Cytosol 0 0.438654279623855 0.824383974075318 0 hPsi_site_6048 iPseU_CNN:0.824383974075318;iRNA_PseU:0 6049 chr15 42679987 42679987 1 + G T UCEC 42679987 + 42679967 42680007 41 AGTGGGTGGACGTGGTTATAGATGACTGCCTGCCAACGTAC AGTGGGTGGACGTGGTTATATATGACTGCCTGCCAACGTAC Direct Gain 0 0.947405147596394 0 0.0860927700996399 prediction 0.894810295192789 Functional Gain - CAPN3 ENSG00000092529 CDS Human protein_coding chr15:42679987 chr15:42679987 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107089 0 0 0 0 2 Cytosol 0 0.438678476248842 0 0 hPsi_site_6049 iPseU_CNN:0;iRNA_PseU:0 6050 chr1 210415046 210415046 1 + G A STAD 210415046 - 210415026 210415066 41 GGGAAGCACCAGTTATTCTGCATGATAATTTCTCCATGGAT GGGAAGCACCAGTTATTCTGTATGATAATTTCTCCATGGAT Direct Gain 0 0.947401968903333 0 0.999772787094116 prediction 0.894803937806667 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415046 chr1:210415046 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107090 0 0 0 0 0 exosome 0 0.438718737677283 0.999545574188232 0 hPsi_site_6050 iPseU_CNN:0.999545574188232;iRNA_PseU:0 6051 chr1 149858827 149858827 1 + C T BLCA 149858827 + 149858807 149858847 41 AACAAGCTGCTGGGCAAAGTCACCATCGCCCAGGGCGGCGT AACAAGCTGCTGGGCAAAGTTACCATCGCCCAGGGCGGCGT Direct Gain 0 0.947400868181263 0 0.999996900558472 prediction 0.894801736362527 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858827 chr1:149858827 synonymous SNV . 0 21 hPsi_associated_SNPs_107091 0 0 1 0 0 Ribosome 0 0.438754074926695 0.999993801116944 0 hPsi_site_6051 iPseU_CNN:0.999993801116944;iRNA_PseU:0 6052 chr19 21681575 21681575 1 + G A rs74608025 21681575 - 21681555 21681595 41 CACATATTTAGGTCATGTGTCATAGGCGGTCATAGCAGAGA CACATATTTAGGTCATGTGTTATAGGCGGTCATAGCAGAGA Direct Gain 0 0.947398367666416 0 0.924752771854401 prediction 0.894796735332832 Functional Gain - LINC00664 ENSG00000268658 ncRNA_exonic Human lincRNA chr19:21681575 chr19:21681575 . . 0 21 hPsi_associated_SNPs_107092 0 0 0 0 0 unknown 0 0.438752067067606 0.849505543708802 0 hPsi_site_6052 iPseU_CNN:0.849505543708802;iRNA_PseU:0 6053 chr11 20676437 20676437 1 + G A rs116313557 20676437 - 20676417 20676457 41 GAGGAAAAACAGGATCAAGTCTGGACCATCCCACACCACTG GAGGAAAAACAGGATCAAGTTTGGACCATCCCACACCACTG Direct Gain 0 0.947396868777347 0 0.0319706499576569 prediction 0.894793737554694 Functional Gain - SLC6A5 ENSG00000165970 UTR3 Human protein_coding chr11:20676437 chr11:20676437 . . 0 21 hPsi_associated_SNPs_107093 0 0 0 0 0 unknown 0 0.438718597423157 0 0 hPsi_site_6053 iPseU_CNN:0;iRNA_PseU:0 6054 chr2 32641045 32641045 1 + G A KICH 32641045 - 32641025 32641065 41 GTGTCCAAGAGTAGAAATGTCAGACGTTTTTTCTCTCTCAA GTGTCCAAGAGTAGAAATGTTAGACGTTTTTTCTCTCTCAA Direct Gain 0 0.947388485531867 0 0.504213035106659 prediction 0.894776971063735 Functional Gain - BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32641045 chr2:32641045 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_107094 0 0 0 0 0 Nucleus 0 0.438752292371531 0.00842607021331809 0 hPsi_site_6054 iPseU_CNN:0.00842607021331809;iRNA_PseU:0 6055 chr3 42678662 42678662 1 + C T COAD 42678662 + 42678642 42678682 41 AAGGAGTTCTCGTTCTTCCTCATTGTCATCTCATCACTCAT AAGGAGTTCTCGTTCTTCCTTATTGTCATCTCATCACTCAT Direct Gain 0 0.947385406751571 0 0.983768582344055 prediction 0.894770813503142 Functional Gain - NKTR ENSG00000114857 CDS Human protein_coding chr3:42678662 chr3:42678662 nonsynonymous SNV 0.342 4 21 hPsi_associated_SNPs_107095 0 0 1 0 0 Nucleus 0 0.438712347841119 0.96753716468811 0 hPsi_site_6055 iPseU_CNN:0.96753716468811;iRNA_PseU:0 6056 chr17 1635682 1635682 1 + C T HNSC 1635682 + 1635662 1635702 41 ACCATCAGCCTCATCGCCCTCATCTGCCTGCGCATTGGACA ACCATCAGCCTCATCGCCCTTATCTGCCTGCGCATTGGACA Direct Gain 0 0.947382410927018 0 0.0860905647277832 prediction 0.894764821854036 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1635682 chr17:1635682 synonymous SNV . 0 21 hPsi_associated_SNPs_107096 0 0 1 0 1 Endoplasmic reticulum 0 0.438718788951913 0 0 hPsi_site_6056 iPseU_CNN:0;iRNA_PseU:0 6057 chr15 74560710 74560710 1 + G A UCEC 74560710 - 74560690 74560730 41 CAACTGGGTCTTGGCAGTGGCTTCATCGGCTTTCCCAGACT CAACTGGGTCTTGGCAGTGGTTTCATCGGCTTTCCCAGACT Direct Gain 0 0.947382040993572 0 0.991356611251831 prediction 0.894764081987143 Functional Gain - CCDC33 ENSG00000140481 CDS Human protein_coding chr15:74560710 chr15:74560710 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107097 0 0 0 0 0 exosome 0 0.438718592995146 0.982713222503662 0 hPsi_site_6057 iPseU_CNN:0.982713222503662;iRNA_PseU:0 6058 chr8 37620169 37620169 1 + C A rs371407450 37620169 - 37620149 37620189 41 AGCTCTCCACATCCCCCGGGGACCGACGCCGAGCCCCAGGC AGCTCTCCACATCCCCCGGGTACCGACGCCGAGCCCCAGGC Direct Gain 0 0.947380271964978 0 0.99996542930603 prediction 0.894760543929956 Functional Gain - PLPBP ENSG00000147471 UTR5 Human protein_coding chr8:37620169 chr8:37620169 . . 0 21 hPsi_associated_SNPs_107098 0 0 0 0 0 unknown 0 0.438605919482352 0.99993085861206 0 hPsi_site_6058 iPseU_CNN:0.99993085861206;iRNA_PseU:0 6059 chr4 6862739 6862739 1 + C T LUSC 6862739 + 6862719 6862759 41 TCTAGCTCTTCTTCATCATCCACAGCCCCACCAGCTAGCAC TCTAGCTCTTCTTCATCATCTACAGCCCCACCAGCTAGCAC Direct Gain 0 0.947373203634045 0 0.990749955177307 prediction 0.89474640726809 Functional Gain - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6862739 chr4:6862739 synonymous SNV . 0 21 hPsi_associated_SNPs_107099 0 0 1 0 0 Nucleus 0 0.438718797034951 0.981499910354614 0 hPsi_site_6059 iPseU_CNN:0.981499910354614;iRNA_PseU:0 6060 chr17 4428422 4428422 1 + G A SKCM 4428422 - 4428402 4428442 41 AAAATGCCGCAGCTGAGAATCACCTTCCTGTTGAAGCGGTC AAAATGCCGCAGCTGAGAATTACCTTCCTGTTGAAGCGGTC Direct Gain 0 0.947372543998485 0 0.999969124794006 prediction 0.894745087996969 Functional Gain - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4428422 chr17:4428422 synonymous SNV . 0 21 hPsi_associated_SNPs_107100 0 0 0 0 0 Ribosome 0 0.438741567634143 0.999938249588012 0 hPsi_site_6060 iPseU_CNN:0.999938249588012;iRNA_PseU:0 6061 chr17 80545111 80545111 1 + A T BLCA 80545111 + 80545091 80545131 41 CAAAACGGCACTCACGTGGCATCAGTCCCCACTGCGGTCCA CAAAACGGCACTCACGTGGCTTCAGTCCCCACTGCGGTCCA Direct Gain 0 0.947372187796702 0 0.493252784013748 prediction 0.894744375593403 Functional Gain - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80545111 chr17:80545111 synonymous SNV . 0 21 hPsi_associated_SNPs_107101 0 0 1 0 1 Cytosol 0 0.438718593641051 0 0 hPsi_site_6061 iPseU_CNN:0;iRNA_PseU:0 6062 chr6 109578931 109578931 1 + C A SARC 109578931 - 109578911 109578951 41 AGGCCTCAGGCGTGGCTGGGGTGAGCCACAGGTCCAGGGCC AGGCCTCAGGCGTGGCTGGGTTGAGCCACAGGTCCAGGGCC Direct Gain 0 0.947371045259001 0 0.893828153610229 prediction 0.894742090518002 Functional Gain - C6orf183 ENSG00000243587;ENSG00000233908 intergenic Human other chr6:109578931 chr6:109578931 . . 0 21 hPsi_associated_SNPs_107102 0 0 0 0 0 unknown 0 0.438429819911606 0.787656307220458 0 hPsi_site_6062 iPseU_CNN:0.787656307220458;iRNA_PseU:0 6063 chrX 135432465 135432465 1 + G T UCEC 135432465 + 135432445 135432485 41 CCACTCATATCCACTGGGGTGACATATCCTTTTACAGCAAC CCACTCATATCCACTGGGGTTACATATCCTTTTACAGCAAC Direct Gain 0 0.947367039775298 0 0.00211837887763977 prediction 0.894734079550596 Functional Gain - ADGRG4 ENSG00000156920 CDS Human protein_coding chrX:135432465 chrX:135432465 synonymous SNV . 0 21 hPsi_associated_SNPs_107103 0 0 0 0 0 exosome 0 0.438718451986215 0 0 hPsi_site_6063 iPseU_CNN:0;iRNA_PseU:0 6064 chr19 31045767 31045767 1 + G A rs112432832 31045767 - 31045747 31045787 41 GAGGACCAGTGTTTGCACCACTCATTCCCTAGGGATGACCA GAGGACCAGTGTTTGCACCATTCATTCCCTAGGGATGACCA Direct Gain 0 0.947365506660112 0 0.998621702194214 prediction 0.894731013320224 Functional Gain - ZNF536 ENSG00000198597 intronic Human protein_coding chr19:31045767 chr19:31045767 . . 0 21 hPsi_associated_SNPs_107104 0 0 0 0 0 exosome 0 0.438723751919025 0.997243404388428 0 hPsi_site_6064 iPseU_CNN:0.997243404388428;iRNA_PseU:0 6065 chr16 57111712 57111712 1 + G T COAD 57111712 + 57111692 57111732 41 TGCAGGCGCCTGGAGGAGTTGATGTGAGTGTCTGCCCAGGT TGCAGGCGCCTGGAGGAGTTTATGTGAGTGTCTGCCCAGGT Direct Gain 0 0.947362056473981 0 0.985033988952637 prediction 0.894724112947962 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57111712 chr16:57111712 nonsynonymous SNV 0.962 0 21 hPsi_associated_SNPs_107105 0 0 0 0 2 Ribosome 0 0.438773038347302 0.970067977905274 0 hPsi_site_6065 iPseU_CNN:0.970067977905274;iRNA_PseU:0 6066 chr2 211525277 211525277 1 + C A BRCA 211525277 - 211525257 211525297 41 ACCTTGGTGGCCACATCAATGAAGTCAACCCCAAGAGTCTT ACCTTGGTGGCCACATCAATTAAGTCAACCCCAAGAGTCTT Direct Gain 0 0.947360438888664 0 0.996551036834717 prediction 0.894720877777328 Functional Gain - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211525277 chr2:211525277 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107106 0 0 0 0 0 Nucleus 0 0.438719693663732 0.993102073669434 0 hPsi_site_6066 iPseU_CNN:0.993102073669434;iRNA_PseU:0 6067 chr2 120194908 120194908 1 + C T ESCA 120194908 + 120194888 120194928 41 CTCAGGAACCAAGTCACACTCATCGGCTTCACCCTAATGTT CTCAGGAACCAAGTCACACTTATCGGCTTCACCCTAATGTT Direct Gain 0 0.947350433746984 0 0.988399147987366 prediction 0.894700867493968 Functional Gain - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194908 chr2:120194908 synonymous SNV . 0 21 hPsi_associated_SNPs_107107 0 0 1 0 0 Endoplasmic reticulum 0 0.438663333192779 0.976798295974732 0 hPsi_site_6067 iPseU_CNN:0.976798295974732;iRNA_PseU:0 6068 chr3 4725119 4725119 1 + C A GBM 4725119 - 4725099 4725139 41 CAAGTGGAGCAGGACACGGAGAAAGGTTCTGCCGCCGTGGT CAAGTGGAGCAGGACACGGATAAAGGTTCTGCCGCCGTGGT Direct Gain 0 0.947349616294083 0 0.999922394752502 prediction 0.894699232588165 Functional Gain - ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4725119 chr3:4725119 nonsynonymous SNV 0.891 5 21 hPsi_associated_SNPs_107108 0 0 0 0 0 Endoplasmic reticulum 0 0.438727111181988 0.999844789505004 0 hPsi_site_6068 iPseU_CNN:0.999844789505004;iRNA_PseU:0 6069 chr2 27804970 27804970 1 + G T UCEC 27804970 + 27804950 27804990 41 CCATCGTAGGATTTCTGAGAGAAGTCACAGTCCCTCAGAGA CCATCGTAGGATTTCTGAGATAAGTCACAGTCCCTCAGAGA Direct Gain 0 0.947345306540316 0 0.999820590019226 prediction 0.894690613080632 Functional Gain - C2orf16 ENSG00000221843 CDS Human protein_coding chr2:27804970 chr2:27804970 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107109 0 0 0 0 0 chromatin 0 0.438719728518419 0.999641180038452 0 hPsi_site_6069 iPseU_CNN:0.999641180038452;iRNA_PseU:0 6070 chr14 90429894 90429894 1 + G A CESC 90429894 - 90429874 90429914 41 CTGGCCCTCCCCTGATGTCTCATACTCGTCTTCCTCCTCTT CTGGCCCTCCCCTGATGTCTTATACTCGTCTTCCTCCTCTT Direct Gain 0 0.94734402222776 0 0.999941945075989 prediction 0.894688044455521 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429894 chr14:90429894 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_107110 0 0 0 0 0 chromatin 0 0.438764208829409 0.999883890151978 0 hPsi_site_6070 iPseU_CNN:0.999883890151978;iRNA_PseU:0 6071 chr1 109779970 109779970 1 + G A UCEC 109779970 - 109779950 109779990 41 GGCATGAACTCCTTCAATTTCTCAGGCACAGTGATGCCCTT GGCATGAACTCCTTCAATTTTTCAGGCACAGTGATGCCCTT Direct Gain 0 0.947341125165763 0 0.990452289581299 prediction 0.894682250331526 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109779970 chr1:109779970 synonymous SNV . 0 21 hPsi_associated_SNPs_107111 0 0 0 0 0 Ribosome 0 0.438718596064086 0.980904579162598 0 hPsi_site_6071 iPseU_CNN:0.980904579162598;iRNA_PseU:0 6072 chr1 228509548 228509548 1 + G A LUSC 228509548 - 228509528 228509568 41 CGGCGGAAGGCATCGTCCAGCTCACCCCCAGAGGAGCTCTC CGGCGGAAGGCATCGTCCAGTTCACCCCCAGAGGAGCTCTC Direct Gain 0 0.947339439159672 0 0.379134744405746 prediction 0.894678878319344 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228509548 chr1:228509548 synonymous SNV . 0 21 hPsi_associated_SNPs_107112 0 0 0 0 0 Ribosome 0 0.438718925443057 0 0 hPsi_site_6072 iPseU_CNN:0;iRNA_PseU:0 6073 chr8 91057130 91057130 1 + C T ESCA 91057130 + 91057110 91057150 41 TTTGAGAAAGAAATGATTGGCAGAATTCCCTGTGGTCGCCT TTTGAGAAAGAAATGATTGGTAGAATTCCCTGTGGTCGCCT Direct Gain 0 0.947330037386241 0 0.820014119148254 prediction 0.894660074772483 Functional Gain - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91057130 chr8:91057130 synonymous SNV . 0 21 hPsi_associated_SNPs_107113 0 0 1 0 1 Cytosol 0 0.438718597733454 0.640028238296508 0 hPsi_site_6073 iPseU_CNN:0.640028238296508;iRNA_PseU:0 6074 chr2 9621513 9621513 1 + G A GBM 9621513 - 9621493 9621533 41 GGTCGGCGTGATGAGAATGACTCGATTCTCAGGGATGTCCA GGTCGGCGTGATGAGAATGATTCGATTCTCAGGGATGTCCA Direct Gain 0 0.947328272184032 0 0.999964416027069 prediction 0.894656544368064 Functional Gain - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9621513 chr2:9621513 nonsynonymous SNV 0.049 0 21 hPsi_associated_SNPs_107114 0 0 1 0 0 Ribosome 0 0.438574343078092 0.999928832054138 0 hPsi_site_6074 iPseU_CNN:0.999928832054138;iRNA_PseU:0 6075 chr6 29141771 29141771 1 + C T SKCM 29141771 + 29141751 29141791 41 TGTCCTACTGGTGGTGATGTCATATGATCGTTATGTAGCTG TGTCCTACTGGTGGTGATGTTATATGATCGTTATGTAGCTG Direct Gain 0 0.947321462618551 0 0.209044188261032 prediction 0.894642925237102 Functional Gain - OR2J2 ENSG00000204700 CDS Human protein_coding chr6:29141771 chr6:29141771 nonsynonymous SNV 0.754 1 21 hPsi_associated_SNPs_107115 0 0 0 0 0 unknown 0 0.43830470243567 0 0 hPsi_site_6075 iPseU_CNN:0;iRNA_PseU:0 6076 chr2 12881541 12881541 1 + G A rs565581962 12881541 - 12881521 12881561 41 GGAGCAAAGCATTAACATGTCATTTCCTGACCAGGATATTA GGAGCAAAGCATTAACATGTTATTTCCTGACCAGGATATTA Direct Gain 0 0.94731984513501 0 0.941458225250244 prediction 0.89463969027002 Functional Gain - TRIB2 ENSG00000071575 UTR3 Human protein_coding chr2:12881541 chr2:12881541 . . 0 21 hPsi_associated_SNPs_107116 0 0 0 0 0 Cytosol 0 0.438718524371572 0.882916450500488 0 hPsi_site_6076 iPseU_CNN:0.882916450500488;iRNA_PseU:0 6077 chr9 82336710 82336710 1 + C T ESCA 82336710 + 82336690 82336730 41 ATTGACATTTCTAATGATGGCACCAAGCTCTGGACAGGTGG ATTGACATTTCTAATGATGGTACCAAGCTCTGGACAGGTGG Direct Gain 0 0.947319207805469 0 0.997734606266022 prediction 0.894638415610939 Functional Gain - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82336710 chr9:82336710 synonymous SNV . 0 21 hPsi_associated_SNPs_107117 0 0 1 0 2 Endoplasmic reticulum 0 0.438711109973579 0.995469212532044 0 hPsi_site_6077 iPseU_CNN:0.995469212532044;iRNA_PseU:0 6078 chr3 110837742 110837742 1 + G T LUSC 110837742 + 110837722 110837762 41 GAAGGCGAATTACTTGTGTTGTAAAACATCCAGCCTTGGAA GAAGGCGAATTACTTGTGTTTTAAAACATCCAGCCTTGGAA Direct Gain 0 0.947316107759854 0 0.966776192188263 prediction 0.894632215519708 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110837742 chr3:110837742 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107118 0 0 1 0 0 Ribosome 0 0.438718593038155 0.933552384376526 0 hPsi_site_6078 iPseU_CNN:0.933552384376526;iRNA_PseU:0 6079 chr12 21526343 21526343 1 + C A STAD 21526343 - 21526323 21526363 41 TTCAATGGGTGTAGCTTTCAGATGGTTCAATGCAACAGAGA TTCAATGGGTGTAGCTTTCATATGGTTCAATGCAACAGAGA Direct Gain 0 0.947316076834989 0 0.999936580657959 prediction 0.894632153669978 Functional Gain - IAPP ENSG00000121351 CDS Human protein_coding chr12:21526343 chr12:21526343 nonsynonymous SNV 0.056 3 21 hPsi_associated_SNPs_107119 0 0 0 0 0 Cytoplasm 0 0.438718652480376 0.999873161315918 0 hPsi_site_6079 iPseU_CNN:0.999873161315918;iRNA_PseU:0 6080 chr2 18113577 18113577 1 + G A UCEC 18113577 - 18113557 18113597 41 CTAATGTTAAAGTAAGGTAGCTCATGACACTTCTCTGGTGC CTAATGTTAAAGTAAGGTAGTTCATGACACTTCTCTGGTGC Direct Gain 0 0.947312476903447 0 0.863991439342499 prediction 0.894624953806894 Functional Gain - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18113577 chr2:18113577 synonymous SNV . 0 21 hPsi_associated_SNPs_107120 0 0 0 0 0 Cytosol 0 0.438792841249188 0.727982878684998 0 hPsi_site_6080 iPseU_CNN:0.727982878684998;iRNA_PseU:0 6081 chr19 15795970 15795970 1 + G A SKCM 15795970 - 15795950 15795990 41 ATCGCGGTCCTTCAGAAGCTCTTGCACCTCCTGTCGGCAGC ATCGCGGTCCTTCAGAAGCTTTTGCACCTCCTGTCGGCAGC Direct Gain 0 0.947310121389111 0 0.999532699584961 prediction 0.894620242778221 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15795970 chr19:15795970 nonsynonymous SNV 0.753 1 21 hPsi_associated_SNPs_107121 0 0 0 0 0 exosome 0 0.438718459774901 0.999065399169922 0 hPsi_site_6081 iPseU_CNN:0.999065399169922;iRNA_PseU:0 6082 chr17 6659329 6659329 1 + A T rs193161810 6659329 + 6659309 6659349 41 GCTGTGGGCTGGGCCATCGGAAAACTTTCAGTTTTGTTTCC GCTGTGGGCTGGGCCATCGGTAAACTTTCAGTTTTGTTTCC Direct Gain 0 0.94730075011919 0 0.999963521957397 prediction 0.89460150023838 Functional Gain - XAF1 ENSG00000132530 UTR5 Human protein_coding chr17:6659329 chr17:6659329 . . 0 21 hPsi_associated_SNPs_107122 0 0 0 0 1 exosome 0 0.438718592995098 0.999927043914794 0 hPsi_site_6082 iPseU_CNN:0.999927043914794;iRNA_PseU:0 6083 chr17 39394962 39394962 1 + C T rs112651990 39394962 + 39394942 39394982 41 GGAGGGCAGAATACTTCATCCTGATTCTCTTTTTCCTTACA GGAGGGCAGAATACTTCATCTTGATTCTCTTTTTCCTTACA Direct Gain 0 0.947298431817442 0 0.9851233959198 prediction 0.894596863634884 Functional Gain - KRTAP9-8 ENSG00000187272 UTR3 Human protein_coding chr17:39394962 chr17:39394962 . . 0 21 hPsi_associated_SNPs_107123 0 0 0 0 0 unknown 0 0.438504020404672 0.9702467918396 0 hPsi_site_6083 iPseU_CNN:0.9702467918396;iRNA_PseU:0 6084 chr19 10663639 10663639 1 + G T BLCA 10663639 + 10663619 10663659 41 ATGCTCAGGACCACAGCCTGGACGACCTCTGCTCCCAGCTC ATGCTCAGGACCACAGCCTGTACGACCTCTGCTCCCAGCTC Direct Gain 0 0.947298142721122 0 0.994860529899597 prediction 0.894596285442244 Functional Gain - ATG4D ENSG00000130734 CDS Human protein_coding chr19:10663639 chr19:10663639 nonsynonymous SNV 0.971 1 21 hPsi_associated_SNPs_107124 0 0 0 0 1 Ribosome 0 0.438718788494851 0.989721059799194 0 hPsi_site_6084 iPseU_CNN:0.989721059799194;iRNA_PseU:0 6085 chr17 7406760 7406760 1 + C T UCEC 7406760 + 7406740 7406780 41 AATGCTCAGAAAATCTTCCACATCAACCCACGCCTTCCCTC AATGCTCAGAAAATCTTCCATATCAACCCACGCCTTCCCTC Direct Gain 0 0.947297314472782 0 0.959813833236694 prediction 0.894594628945564 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7406760 chr17:7406760 synonymous SNV . 0 21 hPsi_associated_SNPs_107125 0 0 1 0 1 Nucleus 0 0.438716988779864 0.919627666473388 0 hPsi_site_6085 iPseU_CNN:0.919627666473388;iRNA_PseU:0 6086 chr13 39266512 39266512 1 + C T SKCM 39266512 + 39266492 39266532 41 GCCACTGGCCACTTGGGGTTCATGATCACAAGCAAAATATT GCCACTGGCCACTTGGGGTTTATGATCACAAGCAAAATATT Direct Gain 0 0.947282128837251 0 0.915336132049561 prediction 0.894564257674501 Functional Gain - FREM2 ENSG00000150893 CDS Human protein_coding chr13:39266512 chr13:39266512 synonymous SNV . 0 21 hPsi_associated_SNPs_107126 0 0 0 0 0 exosome 0 0.438718592464384 0.830672264099122 0 hPsi_site_6086 iPseU_CNN:0.830672264099122;iRNA_PseU:0 6087 chr22 46406470 46406470 1 + C T rs76426475 46406470 + 46406450 46406490 41 CTGGAGGCCTTGTTCATTCTCATGTGTGTCTCCCCCACATC CTGGAGGCCTTGTTCATTCTTATGTGTGTCTCCCCCACATC Direct Gain 0 0.947280471022439 0 0.989107549190521 prediction 0.894560942044878 Functional Gain - LOC730668 ENSG00000188064;ENSG00000273145 intergenic Human other chr22:46406470 chr22:46406470 . . 0 21 hPsi_associated_SNPs_107127 0 0 0 0 0 unknown 0 0.438710839172525 0.978215098381042 0 hPsi_site_6087 iPseU_CNN:0.978215098381042;iRNA_PseU:0 6088 chr5 36671303 36671303 1 + G A BLCA 36671303 - 36671283 36671323 41 AGGAAGGCATCTGCAGCTGTCACTCGTACAATTTTGCCTTC AGGAAGGCATCTGCAGCTGTTACTCGTACAATTTTGCCTTC Direct Gain 0 0.947271708507789 0 0.960517168045044 prediction 0.894543417015578 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36671303 chr5:36671303 synonymous SNV . 0 21 hPsi_associated_SNPs_107128 0 0 0 0 0 Endoplasmic reticulum 0 0.438639999537195 0.921034336090088 0 hPsi_site_6088 iPseU_CNN:0.921034336090088;iRNA_PseU:0 6089 chr8 73848263 73848263 1 + G A SARC 73848263 - 73848243 73848283 41 GCGGTTGTCATTGAGTTGTCCAAATTCGTCCGTTTCCTGCA GCGGTTGTCATTGAGTTGTCTAAATTCGTCCGTTTCCTGCA Direct Gain 0 0.94726891284252 0 0.739001274108887 prediction 0.89453782568504 Functional Gain - KCNB2 ENSG00000182674 CDS Human protein_coding chr8:73848263 chr8:73848263 nonsynonymous SNV 0.035 5 21 hPsi_associated_SNPs_107129 0 0 0 0 0 exosome 0 0.438695565670905 0.478002548217774 0 hPsi_site_6089 iPseU_CNN:0.478002548217774;iRNA_PseU:0 6090 chrX 153031719 153031719 1 + G A rs12009053 153031719 - 153031699 153031739 41 AGCTGGGGGAAAGAGCCAGGCAGCCGCGGGCTGAGCAAGGA AGCTGGGGGAAAGAGCCAGGTAGCCGCGGGCTGAGCAAGGA Direct Gain 0 0.947262028349449 0 0.998898029327393 prediction 0.894524056698897 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153031719 chrX:153031719 synonymous SNV . 0 21 hPsi_associated_SNPs_107130 0 0 0 0 0 Endoplasmic reticulum 0 0.438718637429623 0.997796058654786 0 hPsi_site_6090 iPseU_CNN:0.997796058654786;iRNA_PseU:0 6091 chr12 124285903 124285903 1 + G A LGG 124285903 - 124285883 124285923 41 TGGGAATGATCTTTGAGAAGCACAGACTCCGCATCGTTTAA TGGGAATGATCTTTGAGAAGTACAGACTCCGCATCGTTTAA Direct Gain 0 0.947261874914009 0 0.435806512832642 prediction 0.894523749828018 Functional Gain - DNAH10 ENSG00000197653 CDS Human protein_coding chr12:124285903 chr12:124285903 synonymous SNV . 0 21 hPsi_associated_SNPs_107131 0 0 0 0 0 cytosol 0 0.438674007125693 0 0 hPsi_site_6091 iPseU_CNN:0;iRNA_PseU:0 6092 chr17 38510637 38510637 1 + G A CESC 38510637 - 38510617 38510657 41 GGGCCGAAGCCAGCGTTGTGCATCTGGGTCCGGTTCAGGGT GGGCCGAAGCCAGCGTTGTGTATCTGGGTCCGGTTCAGGGT Direct Gain 0 0.94726090505238 0 0.999868988990784 prediction 0.894521810104761 Functional Gain - RARA ENSG00000131759 CDS Human protein_coding chr17:38510637 chr17:38510637 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107132 0 0 0 0 0 chromatin 0 0.438726401954213 0.999737977981568 0 hPsi_site_6092 iPseU_CNN:0.999737977981568;iRNA_PseU:0 6093 chr8 39872825 39872825 1 + G A SKCM 39872825 - 39872805 39872845 41 GGAAGGTGCTGAGTGGATGTCTTCTATGAAGGCCTTATGGG GGAAGGTGCTGAGTGGATGTTTTCTATGAAGGCCTTATGGG Direct Gain 0 0.947260829430478 0 0.145726054906845 prediction 0.894521658860955 Functional Gain - IDO2 ENSG00000188676 CDS Human protein_coding chr8:39872825 chr8:39872825 nonsynonymous SNV 0.654 0 21 hPsi_associated_SNPs_107133 0 0 0 0 0 exosome 0 0.438718593003471 0 0 hPsi_site_6093 iPseU_CNN:0;iRNA_PseU:0 6094 chr2 90060797 90060797 1 + T A LUSC 90060797 - 90060777 90060817 41 TACCAGTGTAAGCTACTACCAATGCTCTGACTGGCCCGGCA TACCAGTGTAAGCTACTACCTATGCTCTGACTGGCCCGGCA Direct Gain 0 0.947260122309507 0 0.999672174453735 prediction 0.894520244619014 Functional Gain - MIR4436A;LOC654342 ENSG00000225523 CDS Human IG_V_gene chr2:90060797 chr2:90060797 synonymous SNV . 0 21 hPsi_associated_SNPs_107134 0 0 0 0 0 unknown 0 0.438718592994591 0.99934434890747 0 hPsi_site_6094 iPseU_CNN:0.99934434890747;iRNA_PseU:0 6095 chr19 51633303 51633303 1 + C A LIHC 51633303 - 51633283 51633323 41 TTGATCTCCGAGTACTCGGTGTCAGTGGCCTCCTGTCCCCG TTGATCTCCGAGTACTCGGTTTCAGTGGCCTCCTGTCCCCG Direct Gain 0 0.947254605802214 0 0.999675869941711 prediction 0.894509211604427 Functional Gain - SIGLEC9 ENSG00000129450 CDS Human protein_coding chr19:51633303 chr19:51633303 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107135 0 0 0 0 0 exosome 0 0.438700664100942 0.999351739883422 0 hPsi_site_6095 iPseU_CNN:0.999351739883422;iRNA_PseU:0 6096 chr15 43821015 43821015 1 + C T CESC 43821015 + 43820995 43821035 41 CGGCCCCATCGTGGGGAGCTCTCCCCATCCTTCCTGAACCC CGGCCCCATCGTGGGGAGCTTTCCCCATCCTTCCTGAACCC Direct Gain 0 0.947249040925929 0 0.955387711524963 prediction 0.894498081851858 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43821015 chr15:43821015 synonymous SNV . 0 21 hPsi_associated_SNPs_107136 0 0 1 0 0 nucleolus 0 0.439172339874642 0.910775423049926 0 hPsi_site_6096 iPseU_CNN:0.910775423049926;iRNA_PseU:0 6097 chr6 114181437 114181437 1 + G A rs189092612 114181437 - 114181417 114181457 41 GGGTCGCCACCCGCCGCCCCCTCCTCGCCCGCTGCCGCCTC GGGTCGCCACCCGCCGCCCCTTCCTCGCCCGCTGCCGCCTC Direct Gain 0 0.947244594195424 0 0.941424131393433 prediction 0.894489188390847 Functional Gain - MARCKS ENSG00000155130 CDS Human other chr6:114181437 chr6:114181437 synonymous SNV . 0 21 hPsi_associated_SNPs_107137 0 0 0 0 0 Ribosome 0 0.439235326239007 0.882848262786866 0 hPsi_site_6097 iPseU_CNN:0.882848262786866;iRNA_PseU:0 6098 chr14 65482384 65482384 1 + G A UCEC 65482384 - 65482364 65482404 41 TCTAGCAGTTCCAAGCTGTGCAGGATCCAATAGCAGAGCCA TCTAGCAGTTCCAAGCTGTGTAGGATCCAATAGCAGAGCCA Direct Gain 0 0.947235063428358 0 0.984220385551453 prediction 0.894470126856716 Functional Gain - CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65482384 chr14:65482384 synonymous SNV . 0 21 hPsi_associated_SNPs_107138 0 0 0 0 0 unknown 0 0.438727485426205 0.968440771102906 0 hPsi_site_6098 iPseU_CNN:0.968440771102906;iRNA_PseU:0 6099 chr1 225548490 225548490 1 + G A rs141105896 225548490 - 225548470 225548510 41 TAGTGCCTTTAAAATGAGGTCTTCAGCTTTAGCTGCTTGGT TAGTGCCTTTAAAATGAGGTTTTCAGCTTTAGCTGCTTGGT Direct Gain 0 0.94723426798748 0 0.914395749568939 prediction 0.89446853597496 Functional Gain - DNAH14 ENSG00000185842 CDS Human protein_coding chr1:225548490 chr1:225548490 nonsynonymous SNV 0.458 0 21 hPsi_associated_SNPs_107139 0 0 0 0 0 Cytosol 0 0.438786513455841 0.828791499137878 0 hPsi_site_6099 iPseU_CNN:0.828791499137878;iRNA_PseU:0 6100 chr15 32929213 32929213 1 + A T SKCM 32929213 + 32929193 32929233 41 ATGAGAATATGATGGAAGGTAACTTACCGAAGTGTGCAGCA ATGAGAATATGATGGAAGGTTACTTACCGAAGTGTGCAGCA Direct Gain 0 0.947229744931294 0 0.999511480331421 prediction 0.894459489862587 Functional Gain - ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32929213 chr15:32929213 nonsynonymous SNV 0.001 2 21 hPsi_associated_SNPs_107140 0 0 1 0 0 Ribosome 0 0.462047291968249 0.999022960662842 0 hPsi_site_6100 iPseU_CNN:0.999022960662842;iRNA_PseU:0 6101 chr7 99917593 99917593 1 + G A BLCA 99917593 - 99917573 99917613 41 CTAGGAAAGGTGGGCGCGATCTCGCGCCCACACCCAGTGCT CTAGGAAAGGTGGGCGCGATTTCGCGCCCACACCCAGTGCT Direct Gain 0 0.947228364573517 0 0.402129352092743 prediction 0.894456729147035 Functional Gain - SPDYE3 ENSG00000214300 CDS Human protein_coding chr7:99917593 chr7:99917593 nonsynonymous SNV 0.018 2 21 hPsi_associated_SNPs_107141 0 0 0 0 0 nucleoplasm 0 0.438679052772462 0 0 hPsi_site_6101 iPseU_CNN:0;iRNA_PseU:0 6102 chr3 4669502 4669502 1 + G T SARC 4669502 + 4669482 4669522 41 TCTGCCCAAAAGCAGTTCTGGAAAGCCGCTAAGCCTGGGGC TCTGCCCAAAAGCAGTTCTGTAAAGCCGCTAAGCCTGGGGC Direct Gain 0 0.947227432829367 0 0.684412598609924 prediction 0.894454865658735 Functional Gain - ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4669502 chr3:4669502 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107142 0 0 1 0 2 Endoplasmic reticulum 0 0.438718576742623 0.368825197219848 0 hPsi_site_6102 iPseU_CNN:0.368825197219848;iRNA_PseU:0 6103 chr2 96992343 96992343 1 + A T UCEC 96992343 + 96992323 96992363 41 TAGAGAGCAGATAAGTCTGGAAGATGACCACTGACTCCTAC TAGAGAGCAGATAAGTCTGGTAGATGACCACTGACTCCTAC Direct Gain 0 0.947215211467336 0 0.335273087024689 prediction 0.894430422934672 Functional Gain - ITPRIPL1 ENSG00000198885 UTR5 Human protein_coding chr2:96992343 chr2:96992343 . . 0 21 hPsi_associated_SNPs_107143 0 0 1 0 0 Endoplasmic reticulum 0 0.439039112156203 0 0 hPsi_site_6103 iPseU_CNN:0;iRNA_PseU:0 6104 chr1 174671252 174671252 1 + A T LUAD 174671252 + 174671232 174671272 41 TTTCCACTTTGACTTTTAGGAACAGCTACCGGACCTGCATA TTTCCACTTTGACTTTTAGGTACAGCTACCGGACCTGCATA Direct Gain 0 0.94721402588202 0 0.999727249145508 prediction 0.894428051764041 Functional Gain - RABGAP1L ENSG00000152061 CDS Human protein_coding chr1:174671252 chr1:174671252 nonsynonymous SNV 0.943 3 21 hPsi_associated_SNPs_107144 0 0 1 0 1 Nucleus 0 0.43871422035917 0.999454498291016 0 hPsi_site_6104 iPseU_CNN:0.999454498291016;iRNA_PseU:0 6105 chr18 77477971 77477971 1 + C T rs148819920 77477971 + 77477951 77477991 41 GGGCGCCCGGGGGCCCCCAGCACCCTCCAGCTCCCTACCCA GGGCGCCCGGGGGCCCCCAGTACCCTCCAGCTCCCTACCCA Direct Gain 0 0.947210648241157 0 0.805401206016541 prediction 0.894421296482314 Functional Gain - CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77477971 chr18:77477971 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_107145 0 0 0 0 1 chromatin 0 0.438718592995102 0.610802412033082 0 hPsi_site_6105 iPseU_CNN:0.610802412033082;iRNA_PseU:0 6106 chr5 172386933 172386933 1 + C T BLCA 172386933 + 172386913 172386953 41 AAAAACCGCAAACGTCACTTCAATGCCCCCTCACACGTGCG AAAAACCGCAAACGTCACTTTAATGCCCCCTCACACGTGCG Direct Gain 0 0.947204204466809 0 0.837937951087952 prediction 0.894408408933618 Functional Gain - RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172386933 chr5:172386933 synonymous SNV . 0 21 hPsi_associated_SNPs_107146 0 0 1 0 1 Ribosome 0 0.438718606229944 0.675875902175904 0 hPsi_site_6106 iPseU_CNN:0.675875902175904;iRNA_PseU:0 6107 chr1 248550951 248550951 1 + C T LUAD 248550951 + 248550931 248550971 41 TTGACCAGAGGCTTTACCCTCATGGGGCTCTTCACTCACAA TTGACCAGAGGCTTTACCCTTATGGGGCTCTTCACTCACAA Direct Gain 0 0.947201555120016 0 0.999873161315918 prediction 0.894403110240032 Functional Gain - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248550951 chr1:248550951 synonymous SNV . 0 21 hPsi_associated_SNPs_107147 0 0 0 0 0 unknown 0 0.438718592322092 0.999746322631836 0 hPsi_site_6107 iPseU_CNN:0.999746322631836;iRNA_PseU:0 6108 chr12 104131540 104131540 1 + T A rs181327072 104131540 - 104131520 104131560 41 ACCGAGGCATCGAAAGTAGTAAAGGTGTCACAGCGGCCCCC ACCGAGGCATCGAAAGTAGTTAAGGTGTCACAGCGGCCCCC Direct Gain 0 0.947201371068897 0 0.999989748001099 prediction 0.894402742137794 Functional Gain - STAB2 ENSG00000136011 CDS Human protein_coding chr12:104131540 chr12:104131540 nonsynonymous SNV 0.001 2 21 hPsi_associated_SNPs_107148 0 0 0 0 0 nucleoplasm 0 0.438503543888759 0.999979496002198 0 hPsi_site_6108 iPseU_CNN:0.999979496002198;iRNA_PseU:0 6109 chr4 71346543 71346543 1 + G A SKCM 71346543 - 71346523 71346563 41 ATGCCTTCTGTGACGTAGTTCATGATCCCTTTCTCGACCTT ATGCCTTCTGTGACGTAGTTTATGATCCCTTTCTCGACCTT Direct Gain 0 0.947198806690775 0 0.983474254608154 prediction 0.894397613381549 Functional Gain - MUC7 ENSG00000171195 CDS Human protein_coding chr4:71346543 chr4:71346543 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107149 0 0 0 0 0 unknown 0 0.438715517926272 0.966948509216308 0 hPsi_site_6109 iPseU_CNN:0.966948509216308;iRNA_PseU:0 6110 chr11 94731487 94731487 1 + G T LUAD 94731487 + 94731467 94731507 41 AGCTGTGGGGAGGCAAGGGTGACCTTTTCCATGGATGCCTT AGCTGTGGGGAGGCAAGGGTTACCTTTTCCATGGATGCCTT Direct Gain 0 0.947189206677651 0 0.951359391212463 prediction 0.894378413355302 Functional Gain - KDM4D ENSG00000186280 CDS Human protein_coding chr11:94731487 chr11:94731487 synonymous SNV . 0 21 hPsi_associated_SNPs_107150 0 0 0 0 0 chromatin 0 0.438718570952552 0.902718782424926 0 hPsi_site_6110 iPseU_CNN:0.902718782424926;iRNA_PseU:0 6111 chr9 21818058 21818058 1 + G A UCEC 21818058 - 21818038 21818078 41 TGGTAGTTGACCTTTGAAGGCATGATGGTGTGCTGCCTTCC TGGTAGTTGACCTTTGAAGGTATGATGGTGTGCTGCCTTCC Direct Gain 0 0.947187566107237 0 0.34654837846756 prediction 0.894375132214474 Functional Gain - MTAP ENSG00000099810;ENSG00000264545 CDS Human other chr9:21818058 chr9:21818058 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107151 0 0 0 0 0 Ribosome 0 0.438675258470549 0 0 hPsi_site_6111 iPseU_CNN:0;iRNA_PseU:0 6112 chr19 58352778 58352778 1 + G A COAD 58352778 - 58352758 58352798 41 GCTAAAGGATTTCCCACATTCACAGCACACATAACATTCTT GCTAAAGGATTTCCCACATTTACAGCACACATAACATTCTT Direct Gain 0 0.947184530188623 0 0.116526007652283 prediction 0.894369060377245 Functional Gain - ZNF587B ENSG00000269343 CDS Human protein_coding chr19:58352778 chr19:58352778 nonsynonymous SNV 0.007 1 21 hPsi_associated_SNPs_107152 0 0 0 0 0 cytosol 0 0.439027947784652 0 0 hPsi_site_6112 iPseU_CNN:0;iRNA_PseU:0 6113 chr15 25307533 25307533 1 + G A SKCM 25307533 - 25307513 25307553 41 CGACGGTATGAGTTCTCACTCATTTTGTTCAGCTTTTCCAA CGACGGTATGAGTTCTCACTTATTTTGTTCAGCTTTTCCAA Direct Gain 0 0.947182454838768 0 0.975183486938477 prediction 0.894364909677535 Functional Gain - SNORD116-5;SNORD116-7 ENSG00000207191 ncRNA_exonic Human snoRNA chr15:25307533 chr15:25307533 . . 0 21 hPsi_associated_SNPs_107153 0 0 0 0 0 unknown 0 0.438718078473563 0.950366973876954 0 hPsi_site_6113 iPseU_CNN:0.950366973876954;iRNA_PseU:0 6114 chr11 9116971 9116971 1 + C A rs148678204 9116971 - 9116951 9116991 41 GTCTGAGCCTGGAGCCGGCTGATGTTCCTATTAATCTCAGA GTCTGAGCCTGGAGCCGGCTTATGTTCCTATTAATCTCAGA Direct Gain 0 0.947181988329406 0 0.999510586261749 prediction 0.894363976658811 Functional Gain - KRT8P41 ENSG00000213538 ncRNA_exonic Human processed_pseudogene chr11:9116971 chr11:9116971 . . 0 21 hPsi_associated_SNPs_107154 0 0 0 0 0 unknown 0 0.438721757670265 0.999021172523498 0 hPsi_site_6114 iPseU_CNN:0.999021172523498;iRNA_PseU:0 6115 chr2 73471784 73471784 1 + G T UCEC 73471784 + 73471764 73471804 41 TGGATGCAGTGATGATGCTCGATGATTTGCTGCAGCTTAAA TGGATGCAGTGATGATGCTCTATGATTTGCTGCAGCTTAAA Direct Gain 0 0.94718019363142 0 0.806778073310852 prediction 0.89436038726284 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471784 chr2:73471784 nonsynonymous SNV 0.973 4 21 hPsi_associated_SNPs_107155 0 0 1 0 1 Cytosol 0 0.43872263311727 0.613556146621704 0 hPsi_site_6115 iPseU_CNN:0.613556146621704;iRNA_PseU:0 6116 chr12 49942949 49942949 1 + C T rs140902738 49942949 + 49942929 49942969 41 TTCTCCATCTGCACCATGCTCATCGGCGGTGAGCCCGGCCG TTCTCCATCTGCACCATGCTTATCGGCGGTGAGCCCGGCCG Direct Gain 0 0.947179120070259 0 0.708812355995178 prediction 0.894358240140518 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49942949 chr12:49942949 synonymous SNV . 0 21 hPsi_associated_SNPs_107156 0 0 0 0 1 chromatin 0 0.438694422147817 0.417624711990356 0 hPsi_site_6116 iPseU_CNN:0.417624711990356;iRNA_PseU:0 6117 chr17 78857742 78857742 1 + C A UCEC 78857742 - 78857722 78857762 41 GGGTCGGAGAGGAGGCTGTAGAGCTTCTCATGAGCGCTGTC GGGTCGGAGAGGAGGCTGTATAGCTTCTCATGAGCGCTGTC Direct Gain 0 0.947167902971055 0 0.850838303565979 prediction 0.89433580594211 Functional Gain - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78857742 chr17:78857742 synonymous SNV . 0 21 hPsi_associated_SNPs_107157 0 0 0 0 0 Nucleus 0 0.438714046848359 0.701676607131958 0 hPsi_site_6117 iPseU_CNN:0.701676607131958;iRNA_PseU:0 6118 chr17 59152364 59152364 1 + G A CESC 59152364 - 59152344 59152384 41 TACCTGGGAAAGCCATTCTTCATCTTCCTGTCCACTATGGT TACCTGGGAAAGCCATTCTTTATCTTCCTGTCCACTATGGT Direct Gain 0 0.947163577491856 0 0.996437072753906 prediction 0.894327154983711 Functional Gain - BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59152364 chr17:59152364 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107158 0 0 0 0 0 Cytosol 0 0.438718592995086 0.992874145507812 0 hPsi_site_6118 iPseU_CNN:0.992874145507812;iRNA_PseU:0 6119 chr14 76165604 76165604 1 + G T rs556212778 76165604 + 76165584 76165624 41 AGGGGGCGGGGCGTCTACCTGATCAACAATGTAAGTATGCA AGGGGGCGGGGCGTCTACCTTATCAACAATGTAAGTATGCA Direct Gain 0 0.947155729842249 0 0.562990248203278 prediction 0.894311459684499 Functional Gain - TTLL5 ENSG00000119685 CDS Human protein_coding chr14:76165604 chr14:76165604 synonymous SNV . 0 21 hPsi_associated_SNPs_107159 0 0 1 0 1 Cytosol 0 0.438718593005293 0.125980496406556 0 hPsi_site_6119 iPseU_CNN:0.125980496406556;iRNA_PseU:0 6120 chr2 178977542 178977542 1 + G A PAAD 178977542 - 178977522 178977562 41 TGGTGTCGTTGGGGCCGAGGCACTGGCCATGCATCTCCTCC TGGTGTCGTTGGGGCCGAGGTACTGGCCATGCATCTCCTCC Direct Gain 0 0.947153575773435 0 0.999967873096466 prediction 0.89430715154687 Functional Gain - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178977542 chr2:178977542 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_107160 0 0 0 0 0 Nucleus 0 0.438834927664429 0.999935746192932 0 hPsi_site_6120 iPseU_CNN:0.999935746192932;iRNA_PseU:0 6121 chr21 46363700 46363700 1 + C T BLCA 46363700 + 46363680 46363720 41 GTGAGGAGTGTCACTTCCGTCAGGAGAGGTGAGGCAGGCTC GTGAGGAGTGTCACTTCCGTTAGGAGAGGTGAGGCAGGCTC Direct Gain 0 0.947153179667292 0 0.126925349235535 prediction 0.894306359334583 Functional Gain - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46363700 chr21:46363700 synonymous SNV . 0 21 hPsi_associated_SNPs_107161 0 0 1 0 2 Ribosome 0 0.438826425934927 0 0 hPsi_site_6121 iPseU_CNN:0;iRNA_PseU:0 6122 chr22 26423248 26423248 1 + G A SKCM 26423248 - 26423228 26423268 41 TCATCGAAGTCCACTTTGGTCTTGCGTTCGTAGTCGAGGCT TCATCGAAGTCCACTTTGGTTTTGCGTTCGTAGTCGAGGCT Direct Gain 0 0.947148547519482 0 0.999830782413483 prediction 0.894297095038964 Functional Gain - MYO18B ENSG00000133454 CDS Human protein_coding chr22:26423248 chr22:26423248 synonymous SNV . 0 21 hPsi_associated_SNPs_107162 0 0 0 0 0 chromatin 0 0.438716221102375 0.999661564826966 0 hPsi_site_6122 iPseU_CNN:0.999661564826966;iRNA_PseU:0 6123 chr15 38243250 38243250 1 + C A UCEC 38243250 - 38243230 38243270 41 AAATAGGGTGATGAAAAAGAGACAGCAAAAAATCCTAAAAA AAATAGGGTGATGAAAAAGATACAGCAAAAAATCCTAAAAA Direct Gain 0 0.947146593065071 0 0.963905096054077 prediction 0.894293186130142 Functional Gain - TMCO5A ENSG00000166069 CDS Human protein_coding chr15:38243250 chr15:38243250 nonsynonymous SNV 0.226 1 21 hPsi_associated_SNPs_107163 0 0 0 0 0 exosome 0 0.438713722606072 0.927810192108154 0 hPsi_site_6123 iPseU_CNN:0.927810192108154;iRNA_PseU:0 6124 chr11 101833351 101833351 1 + C T LUAD 101833351 + 101833331 101833371 41 TTCAAGATGCCTATATACCTCACAATCCTGATTCAAAAGAT TTCAAGATGCCTATATACCTTACAATCCTGATTCAAAAGAT Direct Gain 0 0.947144386743898 0 0.991543769836426 prediction 0.894288773487797 Functional Gain - CEP126 ENSG00000110318 CDS Human protein_coding chr11:101833351 chr11:101833351 nonsynonymous SNV 0.079 1 21 hPsi_associated_SNPs_107164 0 0 0 0 0 exosome 0 0.439706155769486 0.983087539672852 0 hPsi_site_6124 iPseU_CNN:0.983087539672852;iRNA_PseU:0 6125 chr5 176078862 176078862 1 + C T LGG 176078862 + 176078842 176078882 41 GTGCTGGGCTTTGCTGGCTGCATTGGGGCCCTCCGGGAGAA GTGCTGGGCTTTGCTGGCTGTATTGGGGCCCTCCGGGAGAA Direct Gain 0 0.947143691113245 0 0.999478280544281 prediction 0.89428738222649 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176078862 chr5:176078862 synonymous SNV . 0 21 hPsi_associated_SNPs_107165 0 0 1 0 1 Endoplasmic reticulum 0 0.435117791810611 0.998956561088562 0 hPsi_site_6125 iPseU_CNN:0.998956561088562;iRNA_PseU:0 6126 chr20 44053208 44053208 1 + C T BLCA 44053208 + 44053188 44053228 41 GACTGGGAAGAGAGTCCCCTCTTCAACAGCCTGTAAGTGTG GACTGGGAAGAGAGTCCCCTTTTCAACAGCCTGTAAGTGTG Direct Gain 0 0.947141720619872 0 0.939607381820679 prediction 0.894283441239744 Functional Gain - PIGT ENSG00000124155 CDS Human protein_coding chr20:44053208 chr20:44053208 synonymous SNV . 0 21 hPsi_associated_SNPs_107166 0 0 0 0 2 Ribosome 0 0.438722393787575 0.879214763641358 0 hPsi_site_6126 iPseU_CNN:0.879214763641358;iRNA_PseU:0 6127 chr22 24574245 24574245 1 + C A rs559396938 24574245 - 24574225 24574265 41 GGCATCCATGTGGGCCTCTGGTCCTGCCCAGGGTCCTGCCC GGCATCCATGTGGGCCTCTGTTCCTGCCCAGGGTCCTGCCC Direct Gain 0 0.947140908764903 0 0.99996280670166 prediction 0.894281817529806 Functional Gain - CABIN1 ENSG00000099991 UTR3 Human protein_coding chr22:24574245 chr22:24574245 . . 0 21 hPsi_associated_SNPs_107167 0 0 0 0 0 Cytosol 0 0.438718592389483 0.99992561340332 0 hPsi_site_6127 iPseU_CNN:0.99992561340332;iRNA_PseU:0 6128 chr10 116605952 116605952 1 + C T SKCM 116605952 + 116605932 116605972 41 AGTTCTGAGATGGGTATTCTCACATCCACTGCTCTGCTTCA AGTTCTGAGATGGGTATTCTTACATCCACTGCTCTGCTTCA Direct Gain 0 0.947138101733692 0 0.935117363929749 prediction 0.894276203467383 Functional Gain - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116605952 chr10:116605952 synonymous SNV . 0 21 hPsi_associated_SNPs_107168 0 0 1 0 1 nucleoplasm 0 0.438718606981366 0.870234727859498 0 hPsi_site_6128 iPseU_CNN:0.870234727859498;iRNA_PseU:0 6129 chr18 42531601 42531601 1 + C A LUAD 42531601 - 42531581 42531621 41 TGAAGACGCCACAAGTGACTGAAAGTTGGAAGGCACGGCTG TGAAGACGCCACAAGTGACTTAAAGTTGGAAGGCACGGCTG Direct Gain 0 0.94713652652947 0 0.867482781410217 prediction 0.89427305305894 Functional Gain - SETBP1 ENSG00000152217 CDS Human protein_coding chr18:42531601 chr18:42531601 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107169 0 0 0 0 0 nucleus 0 0.438718592966906 0.734965562820434 0 hPsi_site_6129 iPseU_CNN:0.734965562820434;iRNA_PseU:0 6130 chr20 39792749 39792749 1 + G A STAD 39792749 - 39792729 39792769 41 TGCCCATGGTAAATAACTGGCATCCCATCCGGGCCGTCCCA TGCCCATGGTAAATAACTGGTATCCCATCCGGGCCGTCCCA Direct Gain 0 0.947136019259055 0 0.994242787361145 prediction 0.894272038518109 Functional Gain - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39792749 chr20:39792749 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107170 0 0 0 0 0 Cytosol 0 0.438718592865029 0.98848557472229 0 hPsi_site_6130 iPseU_CNN:0.98848557472229;iRNA_PseU:0 6131 chr8 77767965 77767965 1 + G A LUSC 77767965 - 77767945 77767985 41 ACCTTGAGTTGAAGATTGCTCATTTGCGTTCGAAAACGCTT ACCTTGAGTTGAAGATTGCTTATTTGCGTTCGAAAACGCTT Direct Gain 0 0.947128619315424 0 0.999985098838806 prediction 0.894257238630847 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77767965 chr8:77767965 nonsynonymous SNV 0.975 2 21 hPsi_associated_SNPs_107171 0 0 0 0 0 Ribosome 0 0.438699613924362 0.999970197677612 0 hPsi_site_6131 iPseU_CNN:0.999970197677612;iRNA_PseU:0 6132 chr10 37431195 37431195 1 + C T SKCM 37431195 + 37431175 37431215 41 TGCATGTCCTACAAAAGAATCATCTACAAAAGCAAGTGCCA TGCATGTCCTACAAAAGAATTATCTACAAAAGCAAGTGCCA Direct Gain 0 0.947125020305814 0 0.99933922290802 prediction 0.894250040611629 Functional Gain - ANKRD30A ENSG00000148513 CDS Human protein_coding chr10:37431195 chr10:37431195 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107172 0 0 0 0 1 exosome 0 0.415186691850384 0.99867844581604 0 hPsi_site_6132 iPseU_CNN:0.99867844581604;iRNA_PseU:0 6133 chr19 55175869 55175869 1 + C T LUAD 55175869 + 55175849 55175889 41 GGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCA GGGGGGACCTACAGGTGCTTTAGCTCACACGGCTTCTCCCA Direct Gain 0 0.947116978328233 0 0.999998927116394 prediction 0.894233956656466 Functional Gain - LILRB4 ENSG00000186818 CDS Human protein_coding chr19:55175869 chr19:55175869 synonymous SNV . 0 21 hPsi_associated_SNPs_107173 0 0 0 0 1 exosome 0 0.43871860187104 0.999997854232788 0 hPsi_site_6133 iPseU_CNN:0.999997854232788;iRNA_PseU:0 6134 chr1 156876145 156876145 1 + G T SKCM 156876145 + 156876125 156876165 41 GTGTGCCAGGCTGGCGGGGCGACGACTGTTCCAGTGGTGAG GTGTGCCAGGCTGGCGGGGCTACGACTGTTCCAGTGGTGAG Direct Gain 0 0.947114016093337 0 0.99770450592041 prediction 0.894228032186675 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156876145 chr1:156876145 nonsynonymous SNV 0.208 2 21 hPsi_associated_SNPs_107174 0 0 0 0 1 cytosol 0 0.438930768361448 0.99540901184082 0 hPsi_site_6134 iPseU_CNN:0.99540901184082;iRNA_PseU:0 6135 chrX 153657425 153657425 1 + G A SKCM 153657425 - 153657405 153657445 41 GTCGCTGGTGATGTGGCCTTCATGAGTGTCGGCCGCAGGAG GTCGCTGGTGATGTGGCCTTTATGAGTGTCGGCCGCAGGAG Direct Gain 0 0.947113225345243 0 0.949254631996155 prediction 0.894226450690486 Functional Gain - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153657425 chrX:153657425 nonsynonymous SNV 0.421 3 21 hPsi_associated_SNPs_107175 0 0 0 0 0 Ribosome 0 0.439300093954822 0.89850926399231 0 hPsi_site_6135 iPseU_CNN:0.89850926399231;iRNA_PseU:0 6136 chr6 150719329 150719329 1 + G A SKCM 150719329 - 150719309 150719349 41 CAGAGGTTTGCGCTTGAGGTCAGGCACCGTGGCCTCCTTGC CAGAGGTTTGCGCTTGAGGTTAGGCACCGTGGCCTCCTTGC Direct Gain 0 0.947106730347909 0 0.999731302261353 prediction 0.894213460695818 Functional Gain - IYD ENSG00000009765 CDS Human protein_coding chr6:150719329 chr6:150719329 nonsynonymous SNV 0.947 0 21 hPsi_associated_SNPs_107176 0 0 0 0 0 exosome 0 0.438706776311603 0.999462604522706 0 hPsi_site_6136 iPseU_CNN:0.999462604522706;iRNA_PseU:0 6137 chr1 196883693 196883693 1 + G A LUAD 196883693 - 196883673 196883713 41 GCATTCGTAGTCCAATGTGTCATGGAGCTTAAACCGCATGC GCATTCGTAGTCCAATGTGTTATGGAGCTTAAACCGCATGC Direct Gain 0 0.947104859961521 0 0.998038291931152 prediction 0.894209719923041 Functional Gain - CFHR4 ENSG00000134365 CDS Human protein_coding chr1:196883693 chr1:196883693 nonsynonymous SNV 0.835 3 21 hPsi_associated_SNPs_107177 0 0 0 0 0 cytosol 0 0.438701311331353 0.996076583862304 0 hPsi_site_6137 iPseU_CNN:0.996076583862304;iRNA_PseU:0 6138 chr9 37746100 37746100 1 + C T UCEC 37746100 + 37746080 37746120 41 ACAGAGGAAGAAGACAGGGACTTGGAAGCACACCCCATGGC ACAGAGGAAGAAGACAGGGATTTGGAAGCACACCCCATGGC Direct Gain 0 0.94710408426972 0 0.901372671127319 prediction 0.89420816853944 Functional Gain - FRMPD1 ENSG00000070601 CDS Human protein_coding chr9:37746100 chr9:37746100 synonymous SNV . 0 21 hPsi_associated_SNPs_107178 0 0 0 0 0 exosome 0 0.438718590965765 0.802745342254638 0 hPsi_site_6138 iPseU_CNN:0.802745342254638;iRNA_PseU:0 6139 chr22 23101666 23101666 1 + A T DLBC 23101666 + 23101646 23101686 41 GGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATACAA GGCTGAGGACGAGGCTGATTTTTACTGCAGCTCATATACAA Direct Gain 0 0.947100577964313 0 0.997457265853882 prediction 0.894201155928626 Functional Gain - GGTLC2;MIR650 ENSG00000211666 CDS Human IG_V_gene chr22:23101666 chr22:23101666 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107179 0 0 0 0 0 unknown 0 0.438705356445734 0.994914531707764 0 hPsi_site_6139 iPseU_CNN:0.994914531707764;iRNA_PseU:0 6140 chr11 117060966 117060966 1 + C A OV 117060966 - 117060946 117060986 41 CGCAGCAGGGCCCGGTTGTGGTTGATCTCCCGTTGCAGGAT CGCAGCAGGGCCCGGTTGTGTTTGATCTCCCGTTGCAGGAT Direct Gain 0 0.947080913811908 0 0.490182220935822 prediction 0.894161827623816 Functional Gain - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117060966 chr11:117060966 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_107180 0 0 0 0 0 Ribosome 0 0.438718612421163 0 0 hPsi_site_6140 iPseU_CNN:0;iRNA_PseU:0 6141 chr10 12870941 12870941 1 + C A rs187718671 12870941 - 12870921 12870961 41 GAGTGGCTCGCGGCTCTGGCGACCCTGGGGCTCCCCTTCCC GAGTGGCTCGCGGCTCTGGCTACCCTGGGGCTCCCCTTCCC Direct Gain 0 0.947079535978076 0 0.98353898525238 prediction 0.894159071956152 Functional Gain - CAMK1D ENSG00000183049 UTR3 Human protein_coding chr10:12870941 chr10:12870941 . . 0 21 hPsi_associated_SNPs_107181 0 0 0 0 0 Ribosome 0 0.438718448314023 0.96707797050476 0 hPsi_site_6141 iPseU_CNN:0.96707797050476;iRNA_PseU:0 6142 chr2 176959694 176959694 1 + T A rs141649575 176959694 - 176959674 176959714 41 ACATTAAAAACAGATATTTTAAAAACCCTAGGCAAGAACAA ACATTAAAAACAGATATTTTTAAAACCCTAGGCAAGAACAA Direct Gain 0 0.947059009302624 0 0.967226445674896 prediction 0.894118018605247 Functional Gain - HOXD13 ENSG00000128714 UTR3 Human protein_coding chr2:176959694 chr2:176959694 . . 0 21 hPsi_associated_SNPs_107182 0 0 0 0 0 exosome 0 0.43871812256686 0.934452891349792 0 hPsi_site_6142 iPseU_CNN:0.934452891349792;iRNA_PseU:0 6143 chrX 86888842 86888842 1 + G T LUSC 86888842 + 86888822 86888862 41 AAGATGGGACCCTGAGGGACGACAGTGGAATTACGTAGCCA AAGATGGGACCCTGAGGGACTACAGTGGAATTACGTAGCCA Direct Gain 0 0.947057866833971 0 0.999262094497681 prediction 0.894115733667943 Functional Gain - KLHL4 ENSG00000102271 CDS Human protein_coding chrX:86888842 chrX:86888842 nonsynonymous SNV 0.954 2 21 hPsi_associated_SNPs_107183 0 0 0 0 2 chromatin 0 0.438627694022327 0.998524188995362 0 hPsi_site_6143 iPseU_CNN:0.998524188995362;iRNA_PseU:0 6144 chr22 26165135 26165135 1 + G A COAD 26165135 - 26165115 26165155 41 TGTGCTCACCTCCTTTGGGGCTTCACAGCCCTTCTCTGTCT TGTGCTCACCTCCTTTGGGGTTTCACAGCCCTTCTCTGTCT Direct Gain 0 0.94705634244916 0 0.495201647281647 prediction 0.894112684898321 Functional Gain - MYO18B ENSG00000133454 CDS Human protein_coding chr22:26165135 chr22:26165135 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107184 0 0 0 0 0 chromatin 0 0.438718346295751 0 0 hPsi_site_6144 iPseU_CNN:0;iRNA_PseU:0 6145 chr5 50137863 50137863 1 + G T COAD 50137863 + 50137843 50137883 41 GAAGGAGGCATTCACAAAGAGATCCTCCGAGTAATTGGTAA GAAGGAGGCATTCACAAAGATATCCTCCGAGTAATTGGTAA Direct Gain 0 0.94705403696084 0 0.766185581684113 prediction 0.89410807392168 Functional Gain - PARP8 ENSG00000151883 CDS Human protein_coding chr5:50137863 chr5:50137863 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107185 0 0 0 0 1 Nucleus 0 0.438716022239449 0.532371163368226 0 hPsi_site_6145 iPseU_CNN:0.532371163368226;iRNA_PseU:0 6146 chr7 75614412 75614412 1 + C T STAD 75614412 + 75614392 75614432 41 GGGTGGTGGAGGCCCGGAGGCACATCCTGGCCATCCTGCAG GGGTGGTGGAGGCCCGGAGGTACATCCTGGCCATCCTGCAG Direct Gain 0 0.947053791703012 0 0.999998986721039 prediction 0.894107583406023 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75614412 chr7:75614412 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107186 0 0 1 0 1 Nucleus 0 0.438718736037786 0.999997973442078 0 hPsi_site_6146 iPseU_CNN:0.999997973442078;iRNA_PseU:0 6147 chr11 93463064 93463064 1 + G A ESCA 93463064 - 93463044 93463084 41 AAAGATGCTCTGACTTTATTCACGCCCTTTAGACGACTCAC AAAGATGCTCTGACTTTATTTACGCCCTTTAGACGACTCAC Direct Gain 0 0.947053502459322 0 0.998481750488281 prediction 0.894107004918645 Functional Gain - CEP295 ENSG00000166004 CDS Human protein_coding chr11:93463064 chr11:93463064 synonymous SNV . 0 21 hPsi_associated_SNPs_107187 0 0 1 0 0 Nucleus 0 0.442454804810174 0.996963500976562 0 hPsi_site_6147 iPseU_CNN:0.996963500976562;iRNA_PseU:0 6148 chrX 153669466 153669466 1 + C T LGG 153669466 + 153669446 153669486 41 GAGTGCCATCTATGGGGGGACATATATGCTGAACAAACCTG GAGTGCCATCTATGGGGGGATATATATGCTGAACAAACCTG Direct Gain 0 0.9470457626619 0 0.99813187122345 prediction 0.894091525323799 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669466 chrX:153669466 nonsynonymous SNV 0.910 3 21 hPsi_associated_SNPs_107188 0 0 1 3 2 Cytosol 0 0.438722150110109 0.9962637424469 0 hPsi_site_6148 iPseU_CNN:0.9962637424469;iRNA_PseU:0 6149 chr20 47567889 47567889 1 + C T UCEC 47567889 + 47567869 47567909 41 GCATACGGGCACATCACTGGCAACGCCCCTGACAGTGGAGC GCATACGGGCACATCACTGGTAACGCCCCTGACAGTGGAGC Direct Gain 0 0.94703720518013 0 0.999590158462524 prediction 0.894074410360259 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47567889 chr20:47567889 synonymous SNV . 0 21 hPsi_associated_SNPs_107189 0 0 1 0 1 Cytosol 0 0.438719669619773 0.999180316925048 0 hPsi_site_6149 iPseU_CNN:0.999180316925048;iRNA_PseU:0 6150 chrX 1534204 1534204 1 + G T rs183517151 1534204 + 1534184 1534224 41 CACACTGTGACGGCTCTCGGGTCAGTTCCTTCCGTGACCTC CACACTGTGACGGCTCTCGGTTCAGTTCCTTCCGTGACCTC Direct Gain 0 0.947033650405777 0 0.999986052513123 prediction 0.894067300811553 Functional Gain - ASMTL-AS1 ENSG00000169093 intronic Human protein_coding chrX:1534204 chrX:1534204 . . 0 21 hPsi_associated_SNPs_107190 0 0 1 0 0 unknown 0 0.438718442039798 0.999972105026246 0 hPsi_site_6150 iPseU_CNN:0.999972105026246;iRNA_PseU:0 6151 chr11 106133535 106133535 1 + G A rs138374529 106133535 - 106133515 106133555 41 TAACACAATCTGCTAAATGTCATAATAAAACAAATGGTTTT TAACACAATCTGCTAAATGTTATAATAAAACAAATGGTTTT Direct Gain 0 0.947023613501138 0 0.761245965957642 prediction 0.894047227002275 Functional Gain - LOC101928535 ENSG00000254811 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:106133535 chr11:106133535 . . 0 21 hPsi_associated_SNPs_107191 0 0 0 0 0 unknown 0 0.438711019301042 0.522491931915284 0 hPsi_site_6151 iPseU_CNN:0.522491931915284;iRNA_PseU:0 6152 chrX 51644781 51644781 1 + G T UCEC 51644781 + 51644761 51644801 41 GAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTGGGCCC GAACCCGCATGGGAATTGGATATGAGGCTGTGTCTGGGCCC Direct Gain 0 0.947011560217294 0 0.99966424703598 prediction 0.894023120434587 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644781 chrX:51644781 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107192 0 0 1 0 0 chromatin 0 0.438717161949236 0.99932849407196 0 hPsi_site_6152 iPseU_CNN:0.99932849407196;iRNA_PseU:0 6153 chr12 49218962 49218962 1 + C T ACC 49218962 + 49218942 49218982 41 GCAGGCGGAACATGTTCCCCCATATGACGTGGTGCCCTCCA GCAGGCGGAACATGTTCCCCTATATGACGTGGTGCCCTCCA Direct Gain 0 0.947005437220097 0 0.999821901321411 prediction 0.894010874440194 Functional Gain - CACNB3 ENSG00000167535 CDS Human protein_coding chr12:49218962 chr12:49218962 nonsynonymous SNV 0.974 4 21 hPsi_associated_SNPs_107193 0 0 0 0 1 Ribosome 0 0.437283489047613 0.999643802642822 0 hPsi_site_6153 iPseU_CNN:0.999643802642822;iRNA_PseU:0 6154 chr10 98716353 98716353 1 + G A rs192771237 98716353 - 98716333 98716373 41 TTCTGAAGGTAGTGTGTGCACATTTTCCACCACCTTCCCCT TTCTGAAGGTAGTGTGTGCATATTTTCCACCACCTTCCCCT Direct Gain 0 0.947003034859703 0 0.628618717193604 prediction 0.894006069719406 Functional Gain - LCOR ENSG00000196233 UTR3 Human protein_coding chr10:98716353 chr10:98716353 . . 0 21 hPsi_associated_SNPs_107194 0 0 0 0 0 Ribosome 0 0.438717313528298 0.257237434387208 0 hPsi_site_6154 iPseU_CNN:0.257237434387208;iRNA_PseU:0 6155 chr19 41038588 41038588 1 + C A LUSC 41038588 - 41038568 41038608 41 CTCTTATGCAGCTTGTGGTTGTCCTCCCGCGTGCCATCCCG CTCTTATGCAGCTTGTGGTTTTCCTCCCGCGTGCCATCCCG Direct Gain 0 0.946997107683613 0 0.997956395149231 prediction 0.893994215367227 Functional Gain - SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41038588 chr19:41038588 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_107195 0 0 0 0 0 cytosol 0 0.438718592994454 0.995912790298462 0 hPsi_site_6155 iPseU_CNN:0.995912790298462;iRNA_PseU:0 6156 chr4 110739100 110739100 1 + G T UCEC 110739100 + 110739080 110739120 41 GTCCTGTTTCAGTATTAGGAGAGTTCCTGCATCCCTGTGAA GTCCTGTTTCAGTATTAGGATAGTTCCTGCATCCCTGTGAA Direct Gain 0 0.946993138175206 0 0.929090619087219 prediction 0.893986276350412 Functional Gain - GAR1 ENSG00000109534 CDS Human protein_coding chr4:110739100 chr4:110739100 stopgain 0.997 1 21 hPsi_associated_SNPs_107196 0 0 1 0 1 chromatin 0 0.438718562872503 0.858181238174438 0 hPsi_site_6156 iPseU_CNN:0.858181238174438;iRNA_PseU:0 6157 chr9 134350323 134350323 1 + C A rs10736851 134350323 - 134350303 134350343 41 TGATGGGTCCCGACCTCCGGGTCCTGCCCGTCTGCTCCGGG TGATGGGTCCCGACCTCCGGTTCCTGCCCGTCTGCTCCGGG Direct Gain 0 0.946988572315444 0 0.999585628509521 prediction 0.893977144630889 Functional Gain - PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134350323 chr9:134350323 nonsynonymous SNV 0.983 1 21 hPsi_associated_SNPs_107197 0 0 0 0 0 Nucleus 0 0.438935925475175 0.999171257019042 0 hPsi_site_6157 iPseU_CNN:0.999171257019042;iRNA_PseU:0 6158 chr1 160327971 160327971 1 + C T BLCA 160327971 + 160327951 160327991 41 ACAGTGGGCTTCGGCATCCTCATCTTCTCCCTCATCGTCAC ACAGTGGGCTTCGGCATCCTTATCTTCTCCCTCATCGTCAC Direct Gain 0 0.946973257795712 0 0.999997019767761 prediction 0.893946515591423 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160327971 chr1:160327971 synonymous SNV . 0 21 hPsi_associated_SNPs_107198 0 0 1 0 1 Endoplasmic reticulum 0 0.438717592593986 0.999994039535522 0 hPsi_site_6158 iPseU_CNN:0.999994039535522;iRNA_PseU:0 6159 chr7 100349892 100349892 1 + G T UCEC 100349892 + 100349872 100349912 41 AAAAACCCACCATCCCCACAGAAAAACCCACCATCCCCACA AAAAACCCACCATCCCCACATAAAAACCCACCATCCCCACA Direct Gain 0 0.946973148203312 0 0.999923944473267 prediction 0.893946296406623 Functional Gain - ZAN ENSG00000146839 CDS Human protein_coding chr7:100349892 chr7:100349892 stopgain 0.002 0 21 hPsi_associated_SNPs_107199 0 0 0 0 0 cytosol 0 0.438718592995102 0.999847888946534 0 hPsi_site_6159 iPseU_CNN:0.999847888946534;iRNA_PseU:0 6160 chr17 71202876 71202876 1 + G A LUSC 71202876 - 71202856 71202896 41 CTCCGGGGGGCGAGCTGATTCTCTGTACCAGTCACCAATCC CTCCGGGGGGCGAGCTGATTTTCTGTACCAGTCACCAATCC Direct Gain 0 0.946973013384941 0 0.999982833862305 prediction 0.893946026769881 Functional Gain - COG1 ENSG00000166685 CDS Human protein_coding chr17:71202876 chr17:71202876 synonymous SNV . 0 21 hPsi_associated_SNPs_107200 0 0 1 0 0 Nucleus 0 0.438718838561356 0.99996566772461 0 hPsi_site_6160 iPseU_CNN:0.99996566772461;iRNA_PseU:0 6161 chr19 50478641 50478641 1 + G A rs12609492 50478641 - 50478621 50478661 41 CTATAAAAGATTAGGGGGGTCAGCTGCCCTTCAGCACCCAA CTATAAAAGATTAGGGGGGTTAGCTGCCCTTCAGCACCCAA Direct Gain 0 0.946971032891466 0 0.0174123644828796 prediction 0.893942065782932 Functional Gain - SIGLEC16 ENSG00000161643 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:50478641 chr19:50478641 . . 0 21 hPsi_associated_SNPs_107201 0 0 0 0 0 unknown 0 0.438718574643534 0 0 hPsi_site_6161 iPseU_CNN:0;iRNA_PseU:0 6162 chr19 43026238 43026238 1 + T A SKCM 43026238 - 43026218 43026258 41 CAACCTACCTGTGGTGGATAAACAATCAGAGCCTCCCGGTC CAACCTACCTGTGGTGGATATACAATCAGAGCCTCCCGGTC Direct Gain 0 0.946970361077175 0 0.999927520751953 prediction 0.89394072215435 Functional Gain - CEACAM1 ENSG00000079385 CDS Human protein_coding chr19:43026238 chr19:43026238 nonsynonymous SNV 0.001 3 21 hPsi_associated_SNPs_107202 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593966257 0.999855041503906 0 hPsi_site_6162 iPseU_CNN:0.999855041503906;iRNA_PseU:0 6163 chr2 95941806 95941806 1 + G A SKCM 95941806 - 95941786 95941826 41 GCCAGCGCCTTGTGCTCTGTCTTCACTCGTCCCCCGCAGCG GCCAGCGCCTTGTGCTCTGTTTTCACTCGTCCCCCGCAGCG Direct Gain 0 0.946969062091122 0 0.995140254497528 prediction 0.893938124182243 Functional Gain - PROM2 ENSG00000155066 CDS Human protein_coding chr2:95941806 chr2:95941806 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107203 0 0 0 0 0 Ribosome 0 0.438951594335215 0.990280508995056 0 hPsi_site_6163 iPseU_CNN:0.990280508995056;iRNA_PseU:0 6164 chrX 23411622 23411622 1 + G A SKCM 23411622 - 23411602 23411642 41 CCTCAGGGTTTCCAAGAGATCATAGAGTTCTTCTCTGTTTG CCTCAGGGTTTCCAAGAGATTATAGAGTTCTTCTCTGTTTG Direct Gain 0 0.946968685724618 0 0.997221708297729 prediction 0.893937371449236 Functional Gain - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23411622 chrX:23411622 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107204 0 0 0 0 0 exosome 0 0.438719949295282 0.994443416595458 0 hPsi_site_6164 iPseU_CNN:0.994443416595458;iRNA_PseU:0 6165 chr19 34305493 34305493 1 + G A rs377523882 34305493 - 34305473 34305513 41 ACGTGGGGGTCTAAAGAGGACATCATCCCCAACCAAAGAAT ACGTGGGGGTCTAAAGAGGATATCATCCCCAACCAAAGAAT Direct Gain 0 0.9469669288211 0 0.998414635658264 prediction 0.8939338576422 Functional Gain - KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34305493 chr19:34305493 . . 0 21 hPsi_associated_SNPs_107205 0 0 0 0 0 Cytosol 0 0.43871857778931 0.996829271316528 0 hPsi_site_6165 iPseU_CNN:0.996829271316528;iRNA_PseU:0 6166 chr14 20215793 20215793 1 + C T SKCM 20215793 + 20215773 20215813 41 TTTTTAGGTCATCTCTCTTTCATTGACCTATGCCTGAGCTG TTTTTAGGTCATCTCTCTTTTATTGACCTATGCCTGAGCTG Direct Gain 0 0.946962180564055 0 0.0286829173564911 prediction 0.89392436112811 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20215793 chr14:20215793 synonymous SNV . 0 21 hPsi_associated_SNPs_107206 0 0 0 0 0 unknown 0 0.43872168872176 0 0 hPsi_site_6166 iPseU_CNN:0;iRNA_PseU:0 6167 chr19 42085857 42085857 1 + G A SARC 42085857 - 42085837 42085877 41 AGCATATGGTTAAACCAGGACAGCTTCATCCTCTTCGTGAC AGCATATGGTTAAACCAGGATAGCTTCATCCTCTTCGTGAC Direct Gain 0 0.946956166891143 0 0.995580554008484 prediction 0.893912333782286 Functional Gain - CEACAM21 ENSG00000007129 CDS Human protein_coding chr19:42085857 chr19:42085857 synonymous SNV . 0 21 hPsi_associated_SNPs_107207 0 0 0 0 0 exosome 0 0.438718593176379 0.991161108016968 0 hPsi_site_6167 iPseU_CNN:0.991161108016968;iRNA_PseU:0 6168 chr7 146818253 146818253 1 + G A LUSC 146818253 - 146818233 146818273 41 CTACGTCATCACATGTACCTCATAGTCCAAGTCCAGGTAGT CTACGTCATCACATGTACCTTATAGTCCAAGTCCAGGTAGT Direct Gain 0 0.946946201024484 0 0.999858021736145 prediction 0.893892402048968 Functional Gain - CNTNAP2 ENSG00000174469 CDS Human protein_coding chr7:146818253 chr7:146818253 nonsynonymous SNV 0.666 3 21 hPsi_associated_SNPs_107208 0 0 0 0 0 Ribosome 0 0.439012314290117 0.99971604347229 0 hPsi_site_6168 iPseU_CNN:0.99971604347229;iRNA_PseU:0 6169 chr7 12611626 12611626 1 + C A rs74569342 12611626 - 12611606 12611646 41 GTTTTCCTCCTAAGCTCAGGGATAAAACTAAACAAACACGA GTTTTCCTCCTAAGCTCAGGTATAAAACTAAACAAACACGA Direct Gain 0 0.946940277470857 0 0.445304274559021 prediction 0.893880554941713 Functional Gain - SCIN ENSG00000006747 intronic Human protein_coding chr7:12611626 chr7:12611626 . . 0 21 hPsi_associated_SNPs_107209 0 0 0 0 0 nucleolus 0 0.438712516663287 0 0 hPsi_site_6169 iPseU_CNN:0;iRNA_PseU:0 6170 chr19 18255395 18255395 1 + G A OV 18255395 - 18255375 18255415 41 GGCTCTGGACTTCTCAGGGGCTGGGTCTCTTGGGCCCCCAA GGCTCTGGACTTCTCAGGGGTTGGGTCTCTTGGGCCCCCAA Direct Gain 0 0.94693913036791 0 0.999994158744812 prediction 0.89387826073582 Functional Gain - MAST3 ENSG00000099308 CDS Human protein_coding chr19:18255395 chr19:18255395 nonsynonymous SNV 0.946 0 21 hPsi_associated_SNPs_107210 0 0 0 0 0 Cytosol 0 0.438718600010531 0.999988317489624 0 hPsi_site_6170 iPseU_CNN:0.999988317489624;iRNA_PseU:0 6171 chr19 17000638 17000638 1 + G A SKCM 17000638 - 17000618 17000658 41 CGCCAGGGCCAGCAGGAGGTCAGCAGCCGCGAGGTTCATCA CGCCAGGGCCAGCAGGAGGTTAGCAGCCGCGAGGTTCATCA Direct Gain 0 0.946935275127416 0 0.837893009185791 prediction 0.893870550254833 Functional Gain - F2RL3 ENSG00000127533 CDS Human protein_coding chr19:17000638 chr19:17000638 nonsynonymous SNV 0.030 4 21 hPsi_associated_SNPs_107211 0 0 0 0 0 chromatin 0 0.438619978408434 0.675786018371582 0 hPsi_site_6171 iPseU_CNN:0.675786018371582;iRNA_PseU:0 6172 chr1 192628641 192628641 1 + C A LUSC 192628641 - 192628621 192628661 41 AGTTGTAGTCAGAAACTGTTGTTGGACTGCATAGTTTTCAA AGTTGTAGTCAGAAACTGTTTTTGGACTGCATAGTTTTCAA Direct Gain 0 0.946934400079881 0 0.39369460940361 prediction 0.893868800159761 Functional Gain - RGS13 ENSG00000127074 CDS Human protein_coding chr1:192628641 chr1:192628641 nonsynonymous SNV 0.074 0 21 hPsi_associated_SNPs_107212 0 0 0 0 0 nucleus 0 0.439958482053982 0 0 hPsi_site_6172 iPseU_CNN:0;iRNA_PseU:0 6173 chrX 18767971 18767971 1 + C T rs150392543 18767971 + 18767951 18767991 41 GATAGATGGGATTATGTGGACTCGATAGATGTCCCAGACTC GATAGATGGGATTATGTGGATTCGATAGATGTCCCAGACTC Direct Gain 0 0.946930458792269 0 0.999910771846771 prediction 0.893860917584538 Functional Gain - PPEF1 ENSG00000086717 CDS Human protein_coding chrX:18767971 chrX:18767971 synonymous SNV . 0 21 hPsi_associated_SNPs_107213 0 0 0 0 2 exosome 0 0.438720010355584 0.999821543693542 0 hPsi_site_6173 iPseU_CNN:0.999821543693542;iRNA_PseU:0 6174 chr20 3002719 3002719 1 + G T LUAD 3002719 + 3002699 3002739 41 GGTGGGCGACATGACCAACAGAAAGCCACAGCGCCTCATCA GGTGGGCGACATGACCAACATAAAGCCACAGCGCCTCATCA Direct Gain 0 0.946930043802101 0 0.981048822402954 prediction 0.893860087604201 Functional Gain - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3002719 chr20:3002719 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107214 0 0 1 0 1 Ribosome 0 0.438724715576967 0.962097644805908 0 hPsi_site_6174 iPseU_CNN:0.962097644805908;iRNA_PseU:0 6175 chr12 7273217 7273217 1 + G A rs138860772 7273217 - 7273197 7273237 41 GTCCCTGGGGACTCACCCTGCACATCCTGGGGCTGTGTCCA GTCCCTGGGGACTCACCCTGTACATCCTGGGGCTGTGTCCA Direct Gain 0 0.9469223879555 0 0.999998927116394 prediction 0.893844775911 Functional Gain - C1RL-AS1 ENSG00000205885 ncRNA_exonic Human antisense chr12:7273217 chr12:7273217 . . 0 21 hPsi_associated_SNPs_107215 0 0 0 0 0 unknown 0 0.438206261357505 0.999997854232788 0 hPsi_site_6175 iPseU_CNN:0.999997854232788;iRNA_PseU:0 6176 chr3 150908568 150908568 1 + C T SKCM 150908568 + 150908548 150908588 41 GTGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCTTCTC GTGCTGCTCTTCTGCGAGTTTATCCGCCATGATGTCTTCTC Direct Gain 0 0.946922178271787 0 0.150602132081985 prediction 0.893844356543574 Functional Gain - MED12L ENSG00000144893 CDS Human protein_coding chr3:150908568 chr3:150908568 synonymous SNV . 0 21 hPsi_associated_SNPs_107216 0 0 0 0 1 exosome 0 0.438707293911171 0 0 hPsi_site_6176 iPseU_CNN:0;iRNA_PseU:0 6177 chr10 98097919 98097919 1 + G A SKCM 98097919 - 98097899 98097939 41 ATGCGCAAAAATTTCTTCTTCACTTTCTGCTTTGAGGAATA ATGCGCAAAAATTTCTTCTTTACTTTCTGCTTTGAGGAATA Direct Gain 0 0.946919089214307 0 0.998738050460815 prediction 0.893838178428614 Functional Gain - DNTT ENSG00000107447 CDS Human protein_coding chr10:98097919 chr10:98097919 nonsynonymous SNV 0.999 5 21 hPsi_associated_SNPs_107217 0 0 0 0 0 exosome 0 0.439484482787069 0.99747610092163 0 hPsi_site_6177 iPseU_CNN:0.99747610092163;iRNA_PseU:0 6178 chr20 16729104 16729104 1 + G A rs115426082 16729104 - 16729084 16729124 41 TAGACGGTCCATAAATATTCCATGCACAGCACATACAGCCA TAGACGGTCCATAAATATTCTATGCACAGCACATACAGCCA Direct Gain 0 0.946918713864431 0 0.107568144798279 prediction 0.893837427728861 Functional Gain - OTOR ENSG00000125879 CDS Human protein_coding chr20:16729104 chr20:16729104 nonsynonymous SNV 0.935 4 21 hPsi_associated_SNPs_107218 0 0 0 0 0 unknown 0 0.438615012706156 0 0 hPsi_site_6178 iPseU_CNN:0;iRNA_PseU:0 6179 chr20 36488303 36488303 1 + C T UCEC 36488303 + 36488283 36488323 41 ACGTTCATTTGTTTCTAGGACATGGTCCGGCGAGGAGAGAT ACGTTCATTTGTTTCTAGGATATGGTCCGGCGAGGAGAGAT Direct Gain 0 0.946918403287765 0 0.965893626213074 prediction 0.893836806575531 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488303 chr20:36488303 synonymous SNV . 0 21 hPsi_associated_SNPs_107219 0 0 1 0 1 Cytosol 0 0.439142543052154 0.931787252426148 0 hPsi_site_6179 iPseU_CNN:0.931787252426148;iRNA_PseU:0 6180 chrX 100880159 100880159 1 + G T UCEC 100880159 + 100880139 100880179 41 ATAATGACTGGTCTGATGATGATGATGACAGCAATGAGAGC ATAATGACTGGTCTGATGATTATGATGACAGCAATGAGAGC Direct Gain 0 0.946917567965888 0 0.986806869506836 prediction 0.893835135931775 Functional Gain - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880159 chrX:100880159 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107220 0 0 1 0 0 Endoplasmic reticulum 0 0.43419388964528 0.973613739013672 0 hPsi_site_6180 iPseU_CNN:0.973613739013672;iRNA_PseU:0 6181 chr10 75013743 75013743 1 + G A LUSC 75013743 - 75013723 75013763 41 AACAGTTGGCTTTGGAAATCCATCTTTCTGATACCCCTCCA AACAGTTGGCTTTGGAAATCTATCTTTCTGATACCCCTCCA Direct Gain 0 0.946904481623118 0 0.999783456325531 prediction 0.893808963246236 Functional Gain - CFAP70 ENSG00000156042 CDS Human protein_coding chr10:75013743 chr10:75013743 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107221 0 0 0 0 1 cytosol 0 0.438747016747298 0.999566912651062 0 hPsi_site_6181 iPseU_CNN:0.999566912651062;iRNA_PseU:0 6182 chr16 81301547 81301547 1 + C A OV 81301547 - 81301527 81301567 41 ATGGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCTTCCC ATGGAGCAGAACACCTCTGTTTGCTTCCAGGGGCTCTTCCC Direct Gain 0 0.946899337907818 0 0.791225969791412 prediction 0.893798675815636 Functional Gain - BCO1 ENSG00000135697 CDS Human protein_coding chr16:81301547 chr16:81301547 nonsynonymous SNV 0.891 1 21 hPsi_associated_SNPs_107222 0 0 0 0 0 exosome 0 0.438740070480988 0.582451939582824 0 hPsi_site_6182 iPseU_CNN:0.582451939582824;iRNA_PseU:0 6183 chr19 19612021 19612021 1 + G A BLCA 19612021 - 19612001 19612041 41 TCACACATGATGGCGCCGCTCTTCTCCTCCCGCCAGCGGCA TCACACATGATGGCGCCGCTTTTCTCCTCCCGCCAGCGGCA Direct Gain 0 0.946891890584474 0 0.0105277299880981 prediction 0.893783781168948 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19612021 chr19:19612021 synonymous SNV . 0 21 hPsi_associated_SNPs_107223 0 0 0 0 0 Cytosol 0 0.438717276698192 0 0 hPsi_site_6183 iPseU_CNN:0;iRNA_PseU:0 6184 chr6 38997973 38997973 1 + C T SKCM 38997973 + 38997953 38997993 41 TCCACCCCCAAGGTACTCTTCACGCAGTTACCCGTGCTCCA TCCACCCCCAAGGTACTCTTTACGCAGTTACCCGTGCTCCA Direct Gain 0 0.946889490104559 0 0.991360068321228 prediction 0.893778980209117 Functional Gain - DNAH8 ENSG00000124721 CDS Human protein_coding chr6:38997973 chr6:38997973 synonymous SNV . 0 21 hPsi_associated_SNPs_107224 0 0 0 0 1 chromatin 0 0.438716274287717 0.982720136642456 0 hPsi_site_6184 iPseU_CNN:0.982720136642456;iRNA_PseU:0 6185 chr16 31477087 31477087 1 + C T rs571019214 31477087 + 31477067 31477107 41 CCAGAGGTTTCACCCTCCTTCATCTCACGGGCCCAGAGCCC CCAGAGGTTTCACCCTCCTTTATCTCACGGGCCCAGAGCCC Direct Gain 0 0.946886249833963 0 0.999621987342834 prediction 0.893772499667926 Functional Gain - ARMC5 ENSG00000140691 UTR3 Human protein_coding chr16:31477087 chr16:31477087 . . 0 21 hPsi_associated_SNPs_107225 0 0 0 1 0 cytosol 0 0.438718620727058 0.999243974685668 0 hPsi_site_6185 iPseU_CNN:0.999243974685668;iRNA_PseU:0 6186 chr8 67592026 67592026 1 + C T SKCM 67592026 + 67592006 67592046 41 GCAGAAAAGGCAAAAGGGGTCTTTGGCCATCTTCTGCTGGA GCAGAAAAGGCAAAAGGGGTTTTTGGCCATCTTCTGCTGGA Direct Gain 0 0.94688482031475 0 0.736192464828491 prediction 0.893769640629499 Functional Gain - C8orf44 ENSG00000213865 CDS Human protein_coding chr8:67592026 chr8:67592026 nonsynonymous SNV 0.009 1 21 hPsi_associated_SNPs_107226 0 0 0 0 1 chromatin 0 0.438719393454612 0.472384929656982 0 hPsi_site_6186 iPseU_CNN:0.472384929656982;iRNA_PseU:0 6187 chr7 64529093 64529093 1 + G A rs186612064 64529093 - 64529073 64529113 41 AGCATCTAAGGAAAAGGGGTCAATTCCCTATAACAAAAATA AGCATCTAAGGAAAAGGGGTTAATTCCCTATAACAAAAATA Direct Gain 0 0.946877363898047 0 0.860396802425385 prediction 0.893754727796094 Functional Gain - CCT6P3 ENSG00000234585 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64529093 chr7:64529093 . . 0 21 hPsi_associated_SNPs_107227 0 0 0 0 0 unknown 0 0.438718282218474 0.72079360485077 0 hPsi_site_6187 iPseU_CNN:0.72079360485077;iRNA_PseU:0 6188 chr2 242007304 242007304 1 + G A CESC 242007304 - 242007284 242007324 41 GGCCTGGTCCCTGAGGGCCTCAGGGTGGCGGATGGACACAC GGCCTGGTCCCTGAGGGCCTTAGGGTGGCGGATGGACACAC Direct Gain 0 0.946876940803838 0 0.682040810585022 prediction 0.893753881607676 Functional Gain - SNED1 ENSG00000162804 CDS Human protein_coding chr2:242007304 chr2:242007304 nonsynonymous SNV 0.766 0 21 hPsi_associated_SNPs_107228 0 0 0 0 0 nucleus 0 0.438679837784405 0.364081621170044 0 hPsi_site_6188 iPseU_CNN:0.364081621170044;iRNA_PseU:0 6189 chr14 39650430 39650430 1 + C T UCEC 39650430 + 39650410 39650450 41 CTCTCAGCCTGAGGATTTGTCATTAGCTGTTTTACAGCCAA CTCTCAGCCTGAGGATTTGTTATTAGCTGTTTTACAGCCAA Direct Gain 0 0.946875124110031 0 0.985308408737183 prediction 0.893750248220062 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650430 chr14:39650430 nonsynonymous SNV 0.990 0 21 hPsi_associated_SNPs_107229 0 0 1 0 0 Nucleus 0 0.438530421228461 0.970616817474366 0 hPsi_site_6189 iPseU_CNN:0.970616817474366;iRNA_PseU:0 6190 chr7 87774494 87774494 1 + G A SKCM 87774494 - 87774474 87774514 41 TACGGCCGGGGTTCCACAATCACACTCCTCTCCAGTTTCAA TACGGCCGGGGTTCCACAATTACACTCCTCTCCAGTTTCAA Direct Gain 0 0.946867277088973 0 0.980068027973175 prediction 0.893734554177946 Functional Gain - ADAM22 ENSG00000008277 CDS Human protein_coding chr7:87774494 chr7:87774494 nonsynonymous SNV 0.994 4 21 hPsi_associated_SNPs_107230 0 0 0 0 0 cytosol 0 0.438727522325363 0.96013605594635 0 hPsi_site_6190 iPseU_CNN:0.96013605594635;iRNA_PseU:0 6191 chr5 122343893 122343893 1 + G T rs536824411 122343893 + 122343873 122343913 41 GTGAGATTTTCTCAGCCAGTGATAGTACATTCTGAAATGCT GTGAGATTTTCTCAGCCAGTTATAGTACATTCTGAAATGCT Direct Gain 0 0.946865367429112 0 0.999897718429565 prediction 0.893730734858224 Functional Gain - SNX24 ENSG00000064652 UTR3 Human protein_coding chr5:122343893 chr5:122343893 . . 0 21 hPsi_associated_SNPs_107231 0 0 1 0 0 Cytosol 0 0.438651548215177 0.99979543685913 0 hPsi_site_6191 iPseU_CNN:0.99979543685913;iRNA_PseU:0 6192 chr22 32230028 32230028 1 + G A CESC 32230028 - 32230008 32230048 41 AGGGCTTCCTCTTGTTTCCTCATGCTCTGACCACCCCACAC AGGGCTTCCTCTTGTTTCCTTATGCTCTGACCACCCCACAC Direct Gain 0 0.946863500433576 0 0.993397176265717 prediction 0.893727000867153 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32230028 chr22:32230028 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107232 0 0 0 0 0 chromatin 0 0.438706432614224 0.986794352531434 0 hPsi_site_6192 iPseU_CNN:0.986794352531434;iRNA_PseU:0 6193 chr1 17552360 17552360 1 + G A LUSC 17552360 - 17552340 17552380 41 GGACCTGTGATTGTCCCGGTCACAGTTCACCAGCAAGATAG GGACCTGTGATTGTCCCGGTTACAGTTCACCAGCAAGATAG Direct Gain 0 0.946863344791278 0 0.29749584197998 prediction 0.893726689582555 Functional Gain - PADI1 ENSG00000142623 CDS Human protein_coding chr1:17552360 chr1:17552360 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_107233 0 0 0 0 0 exosome 0 0.438740858737285 0 0 hPsi_site_6193 iPseU_CNN:0;iRNA_PseU:0 6194 chr2 26654871 26654871 1 + G A ESCA 26654871 - 26654851 26654891 41 AGGACCAGCTGTTGCACCTGCACATCCTGCTCCAGCTTGAT AGGACCAGCTGTTGCACCTGTACATCCTGCTCCAGCTTGAT Direct Gain 0 0.94686255144506 0 0.999938905239105 prediction 0.893725102890119 Functional Gain - DRC1 ENSG00000157856 CDS Human protein_coding chr2:26654871 chr2:26654871 synonymous SNV . 0 21 hPsi_associated_SNPs_107234 0 0 0 0 0 exosome 0 0.438625534184033 0.99987781047821 0 hPsi_site_6194 iPseU_CNN:0.99987781047821;iRNA_PseU:0 6195 chr5 172341857 172341857 1 + C T UCEC 172341857 + 172341837 172341877 41 ACAAGGTATGGAAGCCCTGCCTCAGCCCTTTCTACCTGCTC ACAAGGTATGGAAGCCCTGCTTCAGCCCTTTCTACCTGCTC Direct Gain 0 0.946856031602963 0 0.241728723049164 prediction 0.893712063205926 Functional Gain - ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172341857 chr5:172341857 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_107235 0 0 1 0 0 Cytosol 0 0.438718574954503 0 0 hPsi_site_6195 iPseU_CNN:0;iRNA_PseU:0 6196 chr9 133355119 133355119 1 + G A STAD 133355119 - 133355099 133355139 41 GTGCCATCCTTGACGTTGGTCACCTTCACAGGGACCCCTAG GTGCCATCCTTGACGTTGGTTACCTTCACAGGGACCCCTAG Direct Gain 0 0.946854638767364 0 0.999998331069946 prediction 0.893709277534729 Functional Gain - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133355119 chr9:133355119 synonymous SNV . 0 21 hPsi_associated_SNPs_107236 0 0 0 0 0 Ribosome 0 0.408023604598821 0.999996662139892 0 hPsi_site_6196 iPseU_CNN:0.999996662139892;iRNA_PseU:0 6197 chr4 69681841 69681841 1 + G A SKCM 69681841 - 69681821 69681861 41 GGATTGTCTTCATATTCATCCAAAGGCTGTATTCTGCGGCC GGATTGTCTTCATATTCATCTAAAGGCTGTATTCTGCGGCC Direct Gain 0 0.946839926244473 0 0.995836079120636 prediction 0.893679852488947 Functional Gain - UGT2B10 ENSG00000109181 CDS Human protein_coding chr4:69681841 chr4:69681841 stopgain 0.150 0 21 hPsi_associated_SNPs_107237 0 0 0 0 0 insoluble cytoplasm 0 0.438717144700434 0.991672158241272 0 hPsi_site_6197 iPseU_CNN:0.991672158241272;iRNA_PseU:0 6198 chr2 1460027 1460027 1 + G A BLCA 1460027 - 1460007 1460047 41 GGAAAACATGGGTTTTGGTTCTCACAAGTCATCTGGCAGTC GGAAAACATGGGTTTTGGTTTTCACAAGTCATCTGGCAGTC Direct Gain 0 0.9468335280013 0 0.348827838897705 prediction 0.8936670560026 Functional Gain - TPO ENSG00000115705 CDS Human protein_coding chr2:1460027 chr2:1460027 synonymous SNV . 0 21 hPsi_associated_SNPs_107238 0 0 0 0 0 exosome 0 0.438718051457912 0 0 hPsi_site_6198 iPseU_CNN:0;iRNA_PseU:0 6199 chrX 66931291 66931291 1 + G A SKCM 66931291 - 66931271 66931311 41 GCTGGTGGTGCTGGAAGCCTCTCCTTCCTCCTGTAGTTTCA GCTGGTGGTGCTGGAAGCCTTTCCTTCCTCCTGTAGTTTCA Direct Gain 0 0.946830887110238 0 0.998892307281494 prediction 0.893661774220476 Functional Gain - AR ENSG00000169083 CDS Human protein_coding chrX:66931291 chrX:66931291 nonsynonymous SNV 0.871 1 21 hPsi_associated_SNPs_107239 0 0 0 0 0 Endoplasmic reticulum 0 0.438687999214627 0.997784614562988 0 hPsi_site_6199 iPseU_CNN:0.997784614562988;iRNA_PseU:0 6200 chr10 135038376 135038376 1 + G A LUAD 135038376 - 135038356 135038396 41 GGCTACTGGAATGTAGCCTTCATCCTCCGTAGCTTGTCCTG GGCTACTGGAATGTAGCCTTTATCCTCCGTAGCTTGTCCTG Direct Gain 0 0.946821184215176 0 0.992151737213135 prediction 0.893642368430353 Functional Gain - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135038376 chr10:135038376 nonsynonymous SNV 0.994 1 21 hPsi_associated_SNPs_107240 0 0 0 0 0 Endoplasmic reticulum 0 0.438674371804667 0.98430347442627 0 hPsi_site_6200 iPseU_CNN:0.98430347442627;iRNA_PseU:0 6201 chr22 31522933 31522933 1 + C T LUSC 31522933 + 31522913 31522953 41 TCGGTGAGGATGCAGGGTGTCATCCTGCTGCTGTTCGCCAA TCGGTGAGGATGCAGGGTGTTATCCTGCTGCTGTTCGCCAA Direct Gain 0 0.946819663127195 0 0.991443991661072 prediction 0.893639326254389 Functional Gain - INPP5J ENSG00000185133 CDS Human protein_coding chr22:31522933 chr22:31522933 synonymous SNV . 0 21 hPsi_associated_SNPs_107241 0 0 0 0 2 Cytosol 0 0.438718528089603 0.982887983322144 0 hPsi_site_6201 iPseU_CNN:0.982887983322144;iRNA_PseU:0 6202 chr11 117866332 117866332 1 + C T SKCM 117866332 + 117866312 117866352 41 GTGACCAACGTCATCATCTTCTTTGCCTTTGTCCTGCTGCT GTGACCAACGTCATCATCTTTTTTGCCTTTGTCCTGCTGCT Direct Gain 0 0.946818227229957 0 0.981118083000183 prediction 0.893636454459915 Functional Gain - IL10RA ENSG00000110324 CDS Human protein_coding chr11:117866332 chr11:117866332 synonymous SNV . 0 21 hPsi_associated_SNPs_107242 0 0 0 0 2 nucleoplasm 0 0.439079612581686 0.962236166000366 0 hPsi_site_6202 iPseU_CNN:0.962236166000366;iRNA_PseU:0 6203 chr1 90470742 90470742 1 + G T UCEC 90470742 + 90470722 90470762 41 ATGGGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCA ATGGGGGTCAGAGATCCATGTATTCCTACCTAAACCAGTCA Direct Gain 0 0.946818124191539 0 0.999938130378723 prediction 0.893636248383078 Functional Gain - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90470742 chr1:90470742 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107243 0 0 1 0 2 Cytosol 0 0.438497114729891 0.999876260757446 0 hPsi_site_6203 iPseU_CNN:0.999876260757446;iRNA_PseU:0 6204 chr15 54914563 54914563 1 + C T SKCM 54914563 + 54914543 54914583 41 CCGTGGGTCAGATATCTGTTCATGTGGACATCACTGCCACC CCGTGGGTCAGATATCTGTTTATGTGGACATCACTGCCACC Direct Gain 0 0.946817025959663 0 0.995689690113068 prediction 0.893634051919325 Functional Gain - UNC13C ENSG00000137766 CDS Human protein_coding chr15:54914563 chr15:54914563 nonsynonymous SNV 0.587 2 21 hPsi_associated_SNPs_107244 0 0 0 0 2 exosome 0 0.438721183124518 0.991379380226136 0 hPsi_site_6204 iPseU_CNN:0.991379380226136;iRNA_PseU:0 6205 chr1 228437925 228437925 1 + C T LUSC 228437925 + 228437905 228437945 41 GGGGGCCAGCGGCTCTCCTTCAGCCTGGACGTGGCAGGTCA GGGGGCCAGCGGCTCTCCTTTAGCCTGGACGTGGCAGGTCA Direct Gain 0 0.94681483805194 0 0.999999761581421 prediction 0.89362967610388 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228437925 chr1:228437925 synonymous SNV . 0 21 hPsi_associated_SNPs_107245 0 0 0 0 1 Ribosome 0 0.43870167323523 0.999999523162842 0 hPsi_site_6205 iPseU_CNN:0.999999523162842;iRNA_PseU:0 6206 chr15 92988094 92988094 1 + C A LUAD 92988094 - 92988074 92988114 41 ACGTTGACGTGGTGCTTCAGGATAAGCTCGTTGACCCACTC ACGTTGACGTGGTGCTTCAGTATAAGCTCGTTGACCCACTC Direct Gain 0 0.946814792419127 0 0.999882996082306 prediction 0.893629584838255 Functional Gain - ST8SIA2 ENSG00000140557 CDS Human protein_coding chr15:92988094 chr15:92988094 synonymous SNV . 0 21 hPsi_associated_SNPs_107246 0 0 0 0 0 Nucleus 0 0.438488346921211 0.999765992164612 0 hPsi_site_6206 iPseU_CNN:0.999765992164612;iRNA_PseU:0 6207 chr9 141070687 141070687 1 + C T BLCA 141070687 + 141070667 141070707 41 GGGGCCGGAAACAACTGGGCCAAGGGACGCTACACCGAAGG GGGGCCGGAAACAACTGGGCTAAGGGACGCTACACCGAAGG Direct Gain 0 0.946806370481292 0 0.996039390563965 prediction 0.893612740962583 Functional Gain - TUBBP5 ENSG00000159247 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:141070687 chr9:141070687 . . 0 21 hPsi_associated_SNPs_107247 0 0 0 0 1 unknown 0 0.438718585831234 0.99207878112793 0 hPsi_site_6207 iPseU_CNN:0.99207878112793;iRNA_PseU:0 6208 chr7 116436137 116436137 1 + G A BLCA 116436137 - 116436117 116436157 41 GGCTGGTCGTGTGTCCACCTCATCATCAGCGTTATCTTCTG GGCTGGTCGTGTGTCCACCTTATCATCAGCGTTATCTTCTG Direct Gain 0 0.946803303200545 0 0.999989748001099 prediction 0.893606606401091 Functional Gain - MET ENSG00000105976 CDS Human protein_coding chr7:116436137 chr7:116436137 nonsynonymous SNV 0.435 0 21 hPsi_associated_SNPs_107248 0 0 0 0 0 Cytosol 0 0.438719743666145 0.999979496002198 0 hPsi_site_6208 iPseU_CNN:0.999979496002198;iRNA_PseU:0 6209 chr15 40531648 40531648 1 + C T rs147797741 40531648 + 40531628 40531668 41 GAGCTGGAAACTTGGAGCTGCACCTGAGTCCCGCCCCTTCT GAGCTGGAAACTTGGAGCTGTACCTGAGTCCCGCCCCTTCT Direct Gain 0 0.9468020382014 0 0.999872922897339 prediction 0.8936040764028 Functional Gain - PAK6 ENSG00000137843 UTR5 Human protein_coding chr15:40531648 chr15:40531648 . . 0 21 hPsi_associated_SNPs_107249 0 0 1 0 0 Cytosol 0 0.438720407349249 0.999745845794678 0 hPsi_site_6209 iPseU_CNN:0.999745845794678;iRNA_PseU:0 6210 chr9 131010638 131010638 1 + G A rs559339653 131010638 - 131010618 131010658 41 CTAGTGCCTAGAATTTGCCTCAATTTCCCAATCCAGAAATT CTAGTGCCTAGAATTTGCCTTAATTTCCCAATCCAGAAATT Direct Gain 0 0.946794992992859 0 0.991455078125 prediction 0.893589985985718 Functional Gain - DNM1 ENSG00000106976 intronic Human protein_coding chr9:131010638 chr9:131010638 . . 0 21 hPsi_associated_SNPs_107250 0 0 0 0 0 Endoplasmic reticulum 0 0.438718209957414 0.98291015625 0 hPsi_site_6210 iPseU_CNN:0.98291015625;iRNA_PseU:0 6211 chr14 45605397 45605397 1 + G T UCEC 45605397 + 45605377 45605417 41 CTCAGCTGGAGTCGGACGATGATGTGTTGCTTGTCGCGGCG CTCAGCTGGAGTCGGACGATTATGTGTTGCTTGTCGCGGCG Direct Gain 0 0.946791502240513 0 0.217954397201538 prediction 0.893583004481026 Functional Gain - FANCM ENSG00000187790 CDS Human protein_coding chr14:45605397 chr14:45605397 nonsynonymous SNV 0.978 3 21 hPsi_associated_SNPs_107251 0 0 1 0 0 chromatin 0 0.438462908332181 0 0 hPsi_site_6211 iPseU_CNN:0;iRNA_PseU:0 6212 chr7 6196526 6196526 1 + C T COAD 6196526 + 6196506 6196546 41 GAACTGCACTTACCCAGGGTCACCAGCTTGGAGACTGTCGC GAACTGCACTTACCCAGGGTTACCAGCTTGGAGACTGTCGC Direct Gain 0 0.946784289362382 0 0.0363135039806366 prediction 0.893568578724763 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6196526 chr7:6196526 synonymous SNV . 0 21 hPsi_associated_SNPs_107252 0 0 1 0 0 Ribosome 0 0.438701385919333 0 0 hPsi_site_6212 iPseU_CNN:0;iRNA_PseU:0 6213 chr22 22697965 22697965 1 + C A LUSC 22697965 - 22697945 22697985 41 TGAGCCCAAGACTGAGAAGCGATCAGGGATGCCATCCCCCT TGAGCCCAAGACTGAGAAGCTATCAGGGATGCCATCCCCCT Direct Gain 0 0.946781494339604 0 0.841374278068542 prediction 0.893562988679207 Functional Gain - BMS1P20;ZNF280B ENSG00000223350 CDS Human IG_V_gene chr22:22697965 chr22:22697965 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107253 0 0 0 0 0 unknown 0 0.438718601230667 0.682748556137084 0 hPsi_site_6213 iPseU_CNN:0.682748556137084;iRNA_PseU:0 6214 chr11 74546898 74546898 1 + G A STAD 74546898 - 74546878 74546918 41 AAGAAGTCTGCTTCTGCAGGCTTCTGTTTAGGTTGCGTGGA AAGAAGTCTGCTTCTGCAGGTTTCTGTTTAGGTTGCGTGGA Direct Gain 0 0.946771961793622 0 0.967475771903992 prediction 0.893543923587245 Functional Gain - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74546898 chr11:74546898 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107254 0 0 0 0 0 Nucleus 0 0.438718602132293 0.934951543807984 0 hPsi_site_6214 iPseU_CNN:0.934951543807984;iRNA_PseU:0 6215 chr10 134017364 134017364 1 + G T LUAD 134017364 + 134017344 134017384 41 AGTGGCGCTCCGGCCCGCGCGTCCTGCCCAGGCAAGATCTC AGTGGCGCTCCGGCCCGCGCTTCCTGCCCAGGCAAGATCTC Direct Gain 0 0.946768246832086 0 0.993648588657379 prediction 0.893536493664173 Functional Gain - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134017364 chr10:134017364 synonymous SNV . 0 21 hPsi_associated_SNPs_107255 0 0 0 0 2 Endoplasmic reticulum 0 0.438375177203581 0.987297177314758 0 hPsi_site_6215 iPseU_CNN:0.987297177314758;iRNA_PseU:0 6216 chr22 26164525 26164525 1 + G A UCEC 26164525 - 26164505 26164545 41 AGACCCCCAGTCCGGGTCTTCTCAGCTTTCGGGGCCAAGAT AGACCCCCAGTCCGGGTCTTTTCAGCTTTCGGGGCCAAGAT Direct Gain 0 0.94676480673963 0 0.842799782752991 prediction 0.89352961347926 Functional Gain - MYO18B ENSG00000133454 CDS Human protein_coding chr22:26164525 chr22:26164525 synonymous SNV . 0 21 hPsi_associated_SNPs_107256 0 0 0 0 0 chromatin 0 0.438718589961951 0.685599565505982 0 hPsi_site_6216 iPseU_CNN:0.685599565505982;iRNA_PseU:0 6217 chr20 9434098 9434098 1 + G A SKCM 9434098 - 9434078 9434118 41 CAGTATTACCCCTTCTTCTTCATTGCCTTCTCTAGGATTTT CAGTATTACCCCTTCTTCTTTATTGCCTTCTCTAGGATTTT Direct Gain 0 0.946758781460347 0 0.032639741897583 prediction 0.893517562920695 Functional Gain - PLCB4 ENSG00000101333 CDS Human protein_coding chr20:9434098 chr20:9434098 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107257 0 0 0 0 0 nucleolus 0 0.43889371113331 0 0 hPsi_site_6217 iPseU_CNN:0;iRNA_PseU:0 6218 chr11 57798508 57798508 1 + C T UCEC 57798508 + 57798488 57798528 41 ATCCATGAAGCACACCTCCTCTTCTTCATACTCTTCCTCAC ATCCATGAAGCACACCTCCTTTTCTTCATACTCTTCCTCAC Direct Gain 0 0.946757792990185 0 0.991829037666321 prediction 0.893515585980369 Functional Gain - OR6Q1 ENSG00000172381 CDS Human other chr11:57798508 chr11:57798508 synonymous SNV . 0 21 hPsi_associated_SNPs_107258 0 0 0 0 0 unknown 0 0.43871856025549 0.983658075332642 0 hPsi_site_6218 iPseU_CNN:0.983658075332642;iRNA_PseU:0 6219 chr14 38679143 38679143 1 + G T LUSC 38679143 + 38679123 38679163 41 GTAAACCTGGGCGTGTGGGTGCTATCGCTGCTCGTCATCCT GTAAACCTGGGCGTGTGGGTTCTATCGCTGCTCGTCATCCT Direct Gain 0 0.946754180566769 0 0.999897181987762 prediction 0.893508361133538 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38679143 chr14:38679143 synonymous SNV . 0 21 hPsi_associated_SNPs_107259 0 0 0 0 0 nucleus 0 0.438415362559633 0.999794363975524 0 hPsi_site_6219 iPseU_CNN:0.999794363975524;iRNA_PseU:0 6220 chr12 12940199 12940199 1 + G A UCEC 12940199 - 12940179 12940219 41 CAGGTGGCCGCGATCTCCTGCACCCTCCGCAGCTCCCGGGA CAGGTGGCCGCGATCTCCTGTACCCTCCGCAGCTCCCGGGA Direct Gain 0 0.946744436608876 0 0.999802947044373 prediction 0.893488873217753 Functional Gain - APOLD1 ENSG00000178878 CDS Human protein_coding chr12:12940199 chr12:12940199 synonymous SNV . 0 21 hPsi_associated_SNPs_107260 0 0 0 0 0 Cytosol 0 0.438802361095343 0.999605894088746 0 hPsi_site_6220 iPseU_CNN:0.999605894088746;iRNA_PseU:0 6221 chr5 35727825 35727825 1 + C T SKCM 35727825 + 35727805 35727845 41 AAAAGTACCAGTAAAGAAATCACCTGCTGACTCTACAGATA AAAAGTACCAGTAAAGAAATTACCTGCTGACTCTACAGATA Direct Gain 0 0.946742908136479 0 0.622325539588928 prediction 0.893485816272959 Functional Gain - SPEF2 ENSG00000152582 CDS Human protein_coding chr5:35727825 chr5:35727825 nonsynonymous SNV 0.989 3 21 hPsi_associated_SNPs_107261 0 0 0 0 1 Cytosol 0 0.428014772178947 0.244651079177856 0 hPsi_site_6221 iPseU_CNN:0.244651079177856;iRNA_PseU:0 6222 chrX 84346126 84346126 1 + C T rs184966814 84346126 + 84346106 84346146 41 ATTAGCTAGGCGTGGTGGCTCATGCCTGTAATTCCAGCTAC ATTAGCTAGGCGTGGTGGCTTATGCCTGTAATTCCAGCTAC Direct Gain 0 0.946732539216386 0 0.998249888420105 prediction 0.893465078432772 Functional Gain - APOOL ENSG00000155008;ENSG00000184788 intergenic Human other chrX:84346126 chrX:84346126 . . 0 21 hPsi_associated_SNPs_107262 0 0 0 0 0 Ribosome 0 0.438718580193348 0.99649977684021 0 hPsi_site_6222 iPseU_CNN:0.99649977684021;iRNA_PseU:0 6223 chr9 116346668 116346668 1 + C T UCEC 116346668 + 116346648 116346688 41 CTGGGCCGCAATGGTGGCTCCATGCACCACCTTTCCCTCTT CTGGGCCGCAATGGTGGCTCTATGCACCACCTTTCCCTCTT Direct Gain 0 0.946727099516559 0 0.993315517902374 prediction 0.893454199033117 Functional Gain - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116346668 chr9:116346668 synonymous SNV . 0 21 hPsi_associated_SNPs_107263 0 0 0 0 1 Nucleus 0 0.43871848125912 0.986631035804748 0 hPsi_site_6223 iPseU_CNN:0.986631035804748;iRNA_PseU:0 6224 chr4 102946432 102946432 1 + G A SKCM 102946432 - 102946412 102946452 41 TTTTCCTTCCCCTTCCATTTCATTTGCCTCAGCTCCATCTG TTTTCCTTCCCCTTCCATTTTATTTGCCTCAGCTCCATCTG Direct Gain 0 0.946722830215403 0 0.430194407701492 prediction 0.893445660430807 Functional Gain - BANK1 ENSG00000153064 CDS Human protein_coding chr4:102946432 chr4:102946432 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_107264 0 0 1 0 0 cytosol 0 0.438718592995102 0 0 hPsi_site_6224 iPseU_CNN:0;iRNA_PseU:0 6225 chr20 34021779 34021779 1 + G A CESC 34021779 - 34021759 34021799 41 AGTCCCATCAGCATCCTCTTCATTGACTCTGCCAACAACGT AGTCCCATCAGCATCCTCTTTATTGACTCTGCCAACAACGT Direct Gain 0 0.946719647564703 0 0.911811470985413 prediction 0.893439295129405 Functional Gain - GDF5;GDF5OS ENSG00000125965 CDS Human protein_coding chr20:34021779 chr20:34021779 synonymous SNV . 0 21 hPsi_associated_SNPs_107265 0 0 0 0 1 unknown 0 0.438718189434909 0.823622941970826 0 hPsi_site_6225 iPseU_CNN:0.823622941970826;iRNA_PseU:0 6226 chr9 130986608 130986608 1 + C A COAD 130986608 - 130986588 130986628 41 ATAACCATGTCCACACACTTGAGACACGGTTCTCGGATCTT ATAACCATGTCCACACACTTTAGACACGGTTCTCGGATCTT Direct Gain 0 0.946718701480587 0 0.000536918640136719 prediction 0.893437402961174 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130986608 chr9:130986608 synonymous SNV . 0 21 hPsi_associated_SNPs_107266 0 0 0 0 0 Endoplasmic reticulum 0 0.437272287289114 0 0 hPsi_site_6226 iPseU_CNN:0;iRNA_PseU:0 6227 chr6 84569507 84569507 1 + G A SARC 84569507 - 84569487 84569527 41 AAAGACTGGGAAGGGACGTTCAGCATCTTCAAACCCCGGCC AAAGACTGGGAAGGGACGTTTAGCATCTTCAAACCCCGGCC Direct Gain 0 0.94671830722453 0 0.866873383522034 prediction 0.89343661444906 Functional Gain - CYB5R4 ENSG00000065615 CDS Human protein_coding chr6:84569507 chr6:84569507 synonymous SNV . 0 21 hPsi_associated_SNPs_107267 0 0 0 0 0 Ribosome 0 0.438718592995102 0.733746767044068 0 hPsi_site_6227 iPseU_CNN:0.733746767044068;iRNA_PseU:0 6228 chrX 124454391 124454391 1 + G T rs192053192 124454391 + 124454371 124454411 41 GTGCTGAATGAGCGTGATGGGTTATGCGGGAGGCTGCTAGA GTGCTGAATGAGCGTGATGGTTTATGCGGGAGGCTGCTAGA Direct Gain 0 0.946715630458297 0 0.752127051353455 prediction 0.893431260916593 Functional Gain - TEX13C ENSG00000263886;ENSG00000213489 intergenic Human other chrX:124454391 chrX:124454391 . . 0 21 hPsi_associated_SNPs_107268 0 0 0 0 0 unknown 0 0.438718031133705 0.50425410270691 0 hPsi_site_6228 iPseU_CNN:0.50425410270691;iRNA_PseU:0 6229 chr13 58208852 58208852 1 + C A CESC 58208852 - 58208832 58208872 41 TTGCACTTGACGGCGATGGTGATCATGGCCGCTAGGAGGAT TTGCACTTGACGGCGATGGTTATCATGGCCGCTAGGAGGAT Direct Gain 0 0.946715300113365 0 0.953164339065552 prediction 0.89343060022673 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58208852 chr13:58208852 synonymous SNV . 0 21 hPsi_associated_SNPs_107269 0 0 0 0 0 exosome 0 0.426953469413025 0.906328678131104 0 hPsi_site_6229 iPseU_CNN:0.906328678131104;iRNA_PseU:0 6230 chr3 107097242 107097242 1 + G A ESCA 107097242 - 107097222 107097262 41 AAGAAGCCACTGGATGAATTCTTCTAACTTGGTAGCACTGA AAGAAGCCACTGGATGAATTTTTCTAACTTGGTAGCACTGA Direct Gain 0 0.946710315674401 0 0.893194079399109 prediction 0.893420631348803 Functional Gain - CCDC54 ENSG00000138483 CDS Human protein_coding chr3:107097242 chr3:107097242 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107270 0 0 1 0 0 unknown 0 0.438678913399447 0.786388158798218 0 hPsi_site_6230 iPseU_CNN:0.786388158798218;iRNA_PseU:0 6231 chr20 44469778 44469778 1 + G A rs140975852 44469778 - 44469758 44469798 41 GCCAGCAAAGGGTGGAGGCTCTTGTCCCCAAGCAGCTGCAG GCCAGCAAAGGGTGGAGGCTTTTGTCCCCAAGCAGCTGCAG Direct Gain 0 0.946709267074212 0 0.99975323677063 prediction 0.893418534148424 Functional Gain - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44469778 chr20:44469778 synonymous SNV . 0 21 hPsi_associated_SNPs_107271 0 0 0 0 0 Ribosome 0 0.438718581442908 0.99950647354126 0 hPsi_site_6231 iPseU_CNN:0.99950647354126;iRNA_PseU:0 6232 chr21 42540475 42540475 1 + G T COAD 42540475 + 42540455 42540495 41 GGCCGCGGCTACTACCTGGAGATGCTGATCGGGACCCCCCC GGCCGCGGCTACTACCTGGATATGCTGATCGGGACCCCCCC Direct Gain 0 0.946706108509485 0 0.977219343185425 prediction 0.893412217018971 Functional Gain - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42540475 chr21:42540475 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107272 0 0 0 0 1 Ribosome 0 0.438725992577371 0.95443868637085 0 hPsi_site_6232 iPseU_CNN:0.95443868637085;iRNA_PseU:0 6233 chr12 78512067 78512067 1 + C T COAD 78512067 + 78512047 78512087 41 AAAGCTGGAACAAGTGCACTCAAAACACCCGGTAGGCTTGT AAAGCTGGAACAAGTGCACTTAAAACACCCGGTAGGCTTGT Direct Gain 0 0.946703350771116 0 0.918549299240112 prediction 0.893406701542232 Functional Gain - NAV3 ENSG00000067798 CDS Human protein_coding chr12:78512067 chr12:78512067 synonymous SNV . 0 21 hPsi_associated_SNPs_107273 0 0 0 0 1 Nucleus 0 0.438716671954501 0.837098598480224 0 hPsi_site_6233 iPseU_CNN:0.837098598480224;iRNA_PseU:0 6234 chr14 24621178 24621178 1 + G A STAD 24621178 - 24621158 24621198 41 GTTGTGGGGCAGGGCCCAGCCACACACGGCACACTCCTGGG GTTGTGGGGCAGGGCCCAGCTACACACGGCACACTCCTGGG Direct Gain 0 0.946702268357399 0 0.999960064888 prediction 0.893404536714798 Functional Gain - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24621178 chr14:24621178 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107274 0 0 0 0 0 Ribosome 0 0.438712225126049 0.999920129776 0 hPsi_site_6234 iPseU_CNN:0.999920129776;iRNA_PseU:0 6235 chr4 119625170 119625170 1 + G A UCEC 119625170 - 119625150 119625190 41 ACAGCCTTTGGATCTAAAGTCTTAGTCTTCCCAGGATTGTT ACAGCCTTTGGATCTAAAGTTTTAGTCTTCCCAGGATTGTT Direct Gain 0 0.946699089211101 0 0.991148233413696 prediction 0.893398178422203 Functional Gain - METTL14 ENSG00000145388 CDS Human protein_coding chr4:119625170 chr4:119625170 synonymous SNV . 0 21 hPsi_associated_SNPs_107275 0 0 0 0 0 Nucleus 0 0.438718472889968 0.982296466827392 0 hPsi_site_6235 iPseU_CNN:0.982296466827392;iRNA_PseU:0 6236 chrX 153628167 153628167 1 + G A STAD 153628167 - 153628147 153628187 41 TTTTACCATGTACTTATTGGCACAAATTCGGGCAGCCTCCA TTTTACCATGTACTTATTGGTACAAATTCGGGCAGCCTCCA Direct Gain 0 0.946698951686879 0 0.932561635971069 prediction 0.893397903373757 Functional Gain - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628167 chrX:153628167 nonsynonymous SNV 0.996 1 21 hPsi_associated_SNPs_107276 0 0 0 0 0 Cytosol 0 0.438718592995088 0.865123271942138 0 hPsi_site_6236 iPseU_CNN:0.865123271942138;iRNA_PseU:0 6237 chr2 114691952 114691952 1 + G T LIHC 114691952 + 114691932 114691972 41 GTGGAGATGGTGTCACTCATGTCATTCCTGTGGTAAGGCTA GTGGAGATGGTGTCACTCATTTCATTCCTGTGGTAAGGCTA Direct Gain 0 0.946695960796924 0 0.837258338928223 prediction 0.893391921593849 Functional Gain - ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114691952 chr2:114691952 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107277 0 0 1 0 2 Ribosome 0 0.438715473127527 0.674516677856446 0 hPsi_site_6237 iPseU_CNN:0.674516677856446;iRNA_PseU:0 6238 chr1 227075812 227075812 1 + C A UCEC 227075812 - 227075792 227075832 41 AGCAGCATCAGTGAAGACATGATCAACCAGCCATGGATGAA AGCAGCATCAGTGAAGACATTATCAACCAGCCATGGATGAA Direct Gain 0 0.946693141506416 0 0.923134207725525 prediction 0.893386283012832 Functional Gain - PSEN2 ENSG00000143801 CDS Human protein_coding chr1:227075812 chr1:227075812 synonymous SNV . 0 21 hPsi_associated_SNPs_107278 0 0 0 0 0 Endoplasmic reticulum 0 0.532941486480087 0.84626841545105 0.0658829729601744 hPsi_site_6238 iPseU_CNN:0.84626841545105;iRNA_PseU:0.0658829729601744 6239 chr2 220327061 220327061 1 + C T LUAD 220327061 + 220327041 220327081 41 GTAAGAGAAGGCCAAGATGTCATCATGAGCATCCGCGTGCA GTAAGAGAAGGCCAAGATGTTATCATGAGCATCCGCGTGCA Direct Gain 0 0.946687971518177 0 0.994876742362976 prediction 0.893375943036353 Functional Gain - SPEG ENSG00000072195 CDS Human protein_coding chr2:220327061 chr2:220327061 synonymous SNV . 0 21 hPsi_associated_SNPs_107279 0 0 0 0 2 Nucleus 0 0.422357634396044 0.989753484725952 0 hPsi_site_6239 iPseU_CNN:0.989753484725952;iRNA_PseU:0 6240 chr13 114287483 114287483 1 + C A COAD 114287483 - 114287463 114287503 41 TTCTCGCAGACCTTCATGGAGAAATGCCGTAGGCCCTTGCC TTCTCGCAGACCTTCATGGATAAATGCCGTAGGCCCTTGCC Direct Gain 0 0.946687763424804 0 0.999417901039124 prediction 0.893375526849607 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114287483 chr13:114287483 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_107280 0 0 0 0 0 Cytosol 0 0.438718594840783 0.998835802078248 0 hPsi_site_6240 iPseU_CNN:0.998835802078248;iRNA_PseU:0 6241 chr1 160389330 160389330 1 + C T SKCM 160389330 + 160389310 160389350 41 GGAGCTGCGCCAGCTCCAGCCTCAGTTCACGCTCAAGGTCG GGAGCTGCGCCAGCTCCAGCTTCAGTTCACGCTCAAGGTCG Direct Gain 0 0.94667905344826 0 0.999978065490723 prediction 0.893358106896521 Functional Gain - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160389330 chr1:160389330 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_107281 0 0 0 0 1 exosome 0 0.438846101762298 0.999956130981446 0 hPsi_site_6241 iPseU_CNN:0.999956130981446;iRNA_PseU:0 6242 chr22 39380231 39380231 1 + G A LUSC 39380231 - 39380211 39380251 41 AAGTTTGGGTGGTACCTGGCCTCGAAAGACCCCTGTGTCCC AAGTTTGGGTGGTACCTGGCTTCGAAAGACCCCTGTGTCCC Direct Gain 0 0.94667391667277 0 0.997730731964111 prediction 0.89334783334554 Functional Gain - APOBEC3B ENSG00000179750 CDS Human protein_coding chr22:39380231 chr22:39380231 nonsynonymous SNV 0.005 3 21 hPsi_associated_SNPs_107282 0 0 0 0 0 exosome 0 0.43871860580874 0.995461463928222 0 hPsi_site_6242 iPseU_CNN:0.995461463928222;iRNA_PseU:0 6243 chrX 47774409 47774409 1 + G A SKCM 47774409 - 47774389 47774429 41 AATAGAGTATAATGAATCATCTCTTGTGTCTTCACCCTCCA AATAGAGTATAATGAATCATTTCTTGTGTCTTCACCCTCCA Direct Gain 0 0.946665135773952 0 0.975005865097046 prediction 0.893330271547904 Functional Gain - ZNF81 ENSG00000197779 CDS Human protein_coding chrX:47774409 chrX:47774409 nonsynonymous SNV 0.962 2 21 hPsi_associated_SNPs_107283 0 0 0 0 0 cytosol 0 0.441588272471304 0.950011730194092 0 hPsi_site_6243 iPseU_CNN:0.950011730194092;iRNA_PseU:0 6244 chr22 25320421 25320421 1 + G A rs114671715 25320421 - 25320401 25320441 41 AAGGCTGAATTGAAGGGGTACTCCCTCCACCCCATCTGCCC AAGGCTGAATTGAAGGGGTATTCCCTCCACCCCATCTGCCC Direct Gain 0 0.946662425824502 0 0.996606588363647 prediction 0.893324851649005 Functional Gain - SGSM1 ENSG00000167037 UTR3 Human protein_coding chr22:25320421 chr22:25320421 . . 0 21 hPsi_associated_SNPs_107284 0 0 0 0 0 exosome 0 0.438718592995167 0.993213176727294 0 hPsi_site_6244 iPseU_CNN:0.993213176727294;iRNA_PseU:0 6245 chr3 19574898 19574898 1 + G A STAD 19574898 - 19574878 19574918 41 AACTGAGAAACTTCCTGAGTCAATGTTGTTACCTATGTGGA AACTGAGAAACTTCCTGAGTTAATGTTGTTACCTATGTGGA Direct Gain 0 0.94665940276953 0 0.991991817951202 prediction 0.89331880553906 Functional Gain - KCNH8 ENSG00000183960 CDS Human protein_coding chr3:19574898 chr3:19574898 synonymous SNV . 0 21 hPsi_associated_SNPs_107285 0 0 0 0 0 exosome 0 0.438718592996424 0.983983635902404 0 hPsi_site_6245 iPseU_CNN:0.983983635902404;iRNA_PseU:0 6246 chr2 202899484 202899484 1 + G T LUAD 202899484 + 202899464 202899504 41 GCGCAGCCGTACCACGGAGAGAAGGGCATCTCCGTGCCGGA GCGCAGCCGTACCACGGAGATAAGGGCATCTCCGTGCCGGA Direct Gain 0 0.946659160606862 0 0.994876503944397 prediction 0.893318321213723 Functional Gain - FZD7 ENSG00000155760 CDS Human protein_coding chr2:202899484 chr2:202899484 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_107286 0 0 1 0 0 Endoplasmic reticulum 0 0.4387203927935 0.989753007888794 0 hPsi_site_6246 iPseU_CNN:0.989753007888794;iRNA_PseU:0 6247 chr5 175717873 175717873 1 + G A UCEC 175717873 - 175717853 175717893 41 AGTACTTCAGTCTATGCAGGCATGGTCTGTTGTACAACCCA AGTACTTCAGTCTATGCAGGTATGGTCTGTTGTACAACCCA Direct Gain 0 0.946651158422818 0 0.999998986721039 prediction 0.893302316845636 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717873 chr5:175717873 nonsynonymous SNV 0.997 4 21 hPsi_associated_SNPs_107287 0 0 0 0 0 chromatin 0 0.438718593190176 0.999997973442078 0 hPsi_site_6247 iPseU_CNN:0.999997973442078;iRNA_PseU:0 6248 chr9 6328931 6328931 1 + G A SKCM 6328931 - 6328911 6328951 41 CTGAATGTGGCCGACTTCTTCACGCCTCCAAGCTTCCTGCA CTGAATGTGGCCGACTTCTTTACGCCTCCAAGCTTCCTGCA Direct Gain 0 0.946646903612473 0 0.932625293731689 prediction 0.893293807224946 Functional Gain - TPD52L3 ENSG00000170777 CDS Human protein_coding chr9:6328931 chr9:6328931 synonymous SNV . 0 21 hPsi_associated_SNPs_107288 0 0 0 0 0 exosome 0 0.438719314245847 0.865250587463378 0 hPsi_site_6248 iPseU_CNN:0.865250587463378;iRNA_PseU:0 6249 chr1 12082378 12082378 1 + C T THYM 12082378 + 12082358 12082398 41 CCGACCGAGACCCCACTCAGCACCCTCGCTGGGCACCTCAA CCGACCGAGACCCCACTCAGTACCCTCGCTGGGCACCTCAA Direct Gain 0 0.94664653897855 0 0.997536897659302 prediction 0.8932930779571 Functional Gain - MIIP ENSG00000116691 CDS Human protein_coding chr1:12082378 chr1:12082378 nonsynonymous SNV 0.013 0 21 hPsi_associated_SNPs_107289 0 0 1 0 0 chromatin 0 0.438745983310968 0.995073795318604 0 hPsi_site_6249 iPseU_CNN:0.995073795318604;iRNA_PseU:0 6250 chr6 54804515 54804515 1 + C T LUSC 54804515 + 54804495 54804535 41 TTTCCCCAGTTATATGTGGTCATTTGAGAAAGCTCACCTCA TTTCCCCAGTTATATGTGGTTATTTGAGAAAGCTCACCTCA Direct Gain 0 0.946646137460863 0 0.999834835529327 prediction 0.893292274921726 Functional Gain - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54804515 chr6:54804515 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_107290 0 0 0 0 1 exosome 0 0.438665992161664 0.999669671058654 0 hPsi_site_6250 iPseU_CNN:0.999669671058654;iRNA_PseU:0 6251 chr16 30990990 30990990 1 + C T LUSC 30990990 + 30990970 30991010 41 GCCCTAGGCCCCTGCTCAGCCACATCCTCCTGGAGCACAAC GCCCTAGGCCCCTGCTCAGCTACATCCTCCTGGAGCACAAC Direct Gain 0 0.946641897642884 0 0.999960720539093 prediction 0.893283795285767 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990990 chr16:30990990 nonsynonymous SNV 0.994 3 21 hPsi_associated_SNPs_107291 0 0 1 0 0 Cytosol 0 0.438718143346835 0.999921441078186 0 hPsi_site_6251 iPseU_CNN:0.999921441078186;iRNA_PseU:0 6252 chr4 55129880 55129880 1 + C T LUSC 55129880 + 55129860 55129900 41 GGAATGACGGATTATTTAGTCATCGTGGAGGATGATGATTC GGAATGACGGATTATTTAGTTATCGTGGAGGATGATGATTC Direct Gain 0 0.946640741972981 0 0.437860190868378 prediction 0.893281483945963 Functional Gain - PDGFRA ENSG00000134853 CDS Human protein_coding chr4:55129880 chr4:55129880 synonymous SNV . 0 21 hPsi_associated_SNPs_107292 0 0 0 0 1 exosome 0 0.43872087445587 0 0 hPsi_site_6252 iPseU_CNN:0;iRNA_PseU:0 6253 chr6 44149024 44149024 1 + C T SKCM 44149024 + 44149004 44149044 41 AAGCTGGGGCTTCTAGAGTTCAAGATCCTGTGGAAAAAACT AAGCTGGGGCTTCTAGAGTTTAAGATCCTGTGGAAAAAACT Direct Gain 0 0.946637790202667 0 0.999927043914795 prediction 0.893275580405334 Functional Gain - CAPN11 ENSG00000137225 CDS Human protein_coding chr6:44149024 chr6:44149024 synonymous SNV . 0 21 hPsi_associated_SNPs_107293 0 0 0 0 2 exosome 0 0.438718465115341 0.99985408782959 0 hPsi_site_6253 iPseU_CNN:0.99985408782959;iRNA_PseU:0 6254 chr2 173462718 173462718 1 + G A rs74618354 173462718 - 173462698 173462738 41 ATTAGCTAAGCAGCTCTGGGCAAAGGATGCCTCCTCTGAAT ATTAGCTAAGCAGCTCTGGGTAAAGGATGCCTCCTCTGAAT Direct Gain 0 0.946636588130417 0 0.286690413951874 prediction 0.893273176260833 Functional Gain - PDK1 ENSG00000152256 UTR3 Human protein_coding chr2:173462718 chr2:173462718 . . 0 21 hPsi_associated_SNPs_107294 0 0 0 0 0 Ribosome 0 0.438848559705689 0 0 hPsi_site_6254 iPseU_CNN:0;iRNA_PseU:0 6255 chr3 187088868 187088868 1 + G T UCEC 187088868 + 187088848 187088888 41 TGTCCCTGGAAGGATCCCATGACACAGCCAATTGTGAGGCA TGTCCCTGGAAGGATCCCATTACACAGCCAATTGTGAGGCA Direct Gain 0 0.946633762497064 0 0.985048770904541 prediction 0.893267524994128 Functional Gain - RTP4 ENSG00000136514 CDS Human protein_coding chr3:187088868 chr3:187088868 nonsynonymous SNV 0.190 4 21 hPsi_associated_SNPs_107295 0 0 0 0 0 exosome 0 0.438718172899606 0.970097541809082 0 hPsi_site_6255 iPseU_CNN:0.970097541809082;iRNA_PseU:0 6256 chr10 88768670 88768670 1 + G A CESC 88768670 - 88768650 88768690 41 GGGGCTGAAGCATATGGAGTCACCCAGCCCGATGTCTGAAT GGGGCTGAAGCATATGGAGTTACCCAGCCCGATGTCTGAAT Direct Gain 0 0.946626939468566 0 0.979252219200134 prediction 0.893253878937133 Functional Gain - AGAP11 ENSG00000151303;ENSG00000261011;ENSG00000271880 ncRNA_exonic Human other chr10:88768670 chr10:88768670 . . 0 21 hPsi_associated_SNPs_107296 0 0 0 0 0 unknown 0 0.4387185929472 0.958504438400268 0 hPsi_site_6256 iPseU_CNN:0.958504438400268;iRNA_PseU:0 6257 chr9 112712736 112712736 1 + T A rs62580182 112712736 - 112712716 112712756 41 ATAGGGAAGGGACTTCAGGAATTTGACAGAAACTTGGGGGA ATAGGGAAGGGACTTCAGGATTTTGACAGAAACTTGGGGGA Direct Gain 0 0.946625963099752 0 0.999961912631989 prediction 0.893251926199504 Functional Gain - PALM2 ENSG00000243444 UTR3 Human protein_coding chr9:112712736 chr9:112712736 . . 0 21 hPsi_associated_SNPs_107297 0 0 0 0 0 exosome 0 0.43871859349281 0.999923825263978 0 hPsi_site_6257 iPseU_CNN:0.999923825263978;iRNA_PseU:0 6258 chr19 56029495 56029495 1 + C T UCEC 56029495 + 56029475 56029515 41 ACCACGACCCCTCACCCCACCACGACTCCTCACCCCACCAC ACCACGACCCCTCACCCCACTACGACTCCTCACCCCACCAC Direct Gain 0 0.946625949632159 0 0.998592615127563 prediction 0.893251899264317 Functional Gain - SSC5D ENSG00000179954 CDS Human protein_coding chr19:56029495 chr19:56029495 synonymous SNV . 0 21 hPsi_associated_SNPs_107298 0 0 0 0 0 nucleus 0 0.438805640413772 0.997185230255126 0 hPsi_site_6258 iPseU_CNN:0.997185230255126;iRNA_PseU:0 6259 chr17 29652932 29652932 1 + G T LUAD 29652932 + 29652912 29652952 41 AGCCATATGAAATTGTAGTGGACCTTACCCATACCGGGCCT AGCCATATGAAATTGTAGTGTACCTTACCCATACCGGGCCT Direct Gain 0 0.946625363319509 0 0.999985814094543 prediction 0.893250726639017 Functional Gain - NF1 ENSG00000196712 CDS Human protein_coding chr17:29652932 chr17:29652932 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107299 1 0 1 0 1 Nucleus 0 0.438718597370486 0.999971628189086 0 hPsi_site_6259 iPseU_CNN:0.999971628189086;iRNA_PseU:0 6260 chr4 159789613 159789613 1 + G A OV 159789613 - 159789593 159789633 41 GTCAGGTTTAAGACCCAGGTCTCTACTGTCAGTGCCCTCTG GTCAGGTTTAAGACCCAGGTTTCTACTGTCAGTGCCCTCTG Direct Gain 0 0.946623479810282 0 0.0340385437011719 prediction 0.893246959620565 Functional Gain - FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159789613 chr4:159789613 nonsynonymous SNV 0.042 0 21 hPsi_associated_SNPs_107300 0 0 0 0 0 Ribosome 0 0.43871859167914 0 0 hPsi_site_6260 iPseU_CNN:0;iRNA_PseU:0 6261 chr7 108213714 108213714 1 + C A UCEC 108213714 - 108213694 108213734 41 GCAGTGCTTGCTAGATCCATGAAATCTATTTTCAGTCTGTA GCAGTGCTTGCTAGATCCATTAAATCTATTTTCAGTCTGTA Direct Gain 0 0.946620533806705 0 0.209268718957901 prediction 0.89324106761341 Functional Gain - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108213714 chr7:108213714 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_107301 0 0 0 0 0 Endoplasmic reticulum 0 0.438900478703215 0 0 hPsi_site_6261 iPseU_CNN:0;iRNA_PseU:0 6262 chr6 43171673 43171673 1 + G A SKCM 43171673 - 43171653 43171693 41 ACCAGGGCCTCCCAGCAGGTCTTGCCCAGTGCCTGGGCGGC ACCAGGGCCTCCCAGCAGGTTTTGCCCAGTGCCTGGGCGGC Direct Gain 0 0.946618951410534 0 0.991961002349854 prediction 0.893237902821068 Functional Gain - CUL9 ENSG00000112659 CDS Human protein_coding chr6:43171673 chr6:43171673 synonymous SNV . 0 21 hPsi_associated_SNPs_107302 0 0 0 0 0 chromatin 0 0.438718576286372 0.983922004699708 0 hPsi_site_6262 iPseU_CNN:0.983922004699708;iRNA_PseU:0 6263 chr12 52695805 52695805 1 + C A UCEC 52695805 - 52695785 52695825 41 GTGAGGCCGCGGTAGCAGGAGATGCCACGGTAGGGGGCGGC GTGAGGCCGCGGTAGCAGGATATGCCACGGTAGGGGGCGGC Direct Gain 0 0.946615137077928 0 0.988723695278168 prediction 0.893230274155856 Functional Gain - KRT86 ENSG00000170442 CDS Human protein_coding chr12:52695805 chr12:52695805 synonymous SNV . 0 21 hPsi_associated_SNPs_107303 0 0 0 0 0 nucleus 0 0.438718676718799 0.977447390556336 0 hPsi_site_6263 iPseU_CNN:0.977447390556336;iRNA_PseU:0 6264 chr3 9776191 9776191 1 + G A LIHC 9776191 - 9776171 9776211 41 GGCCTCCTCGGGGGCTTCCTCATCCTCTGACACCACATCCA GGCCTCCTCGGGGGCTTCCTTATCCTCTGACACCACATCCA Direct Gain 0 0.946607098409213 0 0.999669313430786 prediction 0.893214196818425 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9776191 chr3:9776191 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_107304 0 0 0 0 0 Nucleus 0 0.438732862729997 0.999338626861572 0 hPsi_site_6264 iPseU_CNN:0.999338626861572;iRNA_PseU:0 6265 chr1 120054176 120054176 1 + G A rs587718863 120054176 - 120054156 120054196 41 GGCTCTCTTCAGGAATGGCTCATCCAGAATGTCTCCTTCCA GGCTCTCTTCAGGAATGGCTTATCCAGAATGTCTCCTTCCA Direct Gain 0 0.946605124178042 0 0.983534693717957 prediction 0.893210248356084 Functional Gain - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120054176 chr1:120054176 nonsynonymous SNV 0.829 1 21 hPsi_associated_SNPs_107305 0 0 0 0 0 exosome 0 0.438719821849472 0.967069387435914 0 hPsi_site_6265 iPseU_CNN:0.967069387435914;iRNA_PseU:0 6266 chr1 160393945 160393945 1 + G A UCEC 160393945 - 160393925 160393965 41 GGCCATGGATGCAAAGATGGCTTGGGCTGCCTCCCGGGGGT GGCCATGGATGCAAAGATGGTTTGGGCTGCCTCCCGGGGGT Direct Gain 0 0.946602468197402 0 0.483769237995148 prediction 0.893204936394804 Functional Gain - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160393945 chr1:160393945 nonsynonymous SNV 0.987 3 21 hPsi_associated_SNPs_107306 0 0 0 0 0 exosome 0 0.438718139789183 0 0 hPsi_site_6266 iPseU_CNN:0;iRNA_PseU:0 6267 chr9 37740307 37740307 1 + C A OV 37740307 - 37740287 37740327 41 CTGTAGCCGCGGCTCTCAGTGTTGGCTGAGTCGGACGCCTC CTGTAGCCGCGGCTCTCAGTTTTGGCTGAGTCGGACGCCTC Direct Gain 0 0.946594460811699 0 0.999911725521088 prediction 0.893188921623398 Functional Gain - FRMPD1 ENSG00000070601 CDS Human protein_coding chr9:37740307 chr9:37740307 nonsynonymous SNV 0.989 2 21 hPsi_associated_SNPs_107307 0 0 0 0 0 exosome 0 0.438719383159598 0.999823451042176 0 hPsi_site_6267 iPseU_CNN:0.999823451042176;iRNA_PseU:0 6268 chr17 1679855 1679855 1 + G A SKCM 1679855 - 1679835 1679875 41 GGCAGGAAGAAGATGATACTCATGCTTCCGGTCAAGGGCAG GGCAGGAAGAAGATGATACTTATGCTTCCGGTCAAGGGCAG Direct Gain 0 0.946592561921746 0 0.999777734279633 prediction 0.893185123843492 Functional Gain - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1679855 chr17:1679855 nonsynonymous SNV 0.870 1 21 hPsi_associated_SNPs_107308 0 0 1 0 0 cytosol 0 0.438718592995103 0.999555468559266 0 hPsi_site_6268 iPseU_CNN:0.999555468559266;iRNA_PseU:0 6269 chr19 41594475 41594475 1 + G A UCEC 41594475 - 41594455 41594495 41 AATGGGGTGGGTCCCGGAGGCAGCTTCCCCCTGCTCTTCCT AATGGGGTGGGTCCCGGAGGTAGCTTCCCCCTGCTCTTCCT Direct Gain 0 0.946591130028984 0 0.999988079071045 prediction 0.893182260057968 Functional Gain - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41594475 chr19:41594475 synonymous SNV . 0 21 hPsi_associated_SNPs_107309 0 0 0 0 0 unknown 0 0.438738453835947 0.99997615814209 0 hPsi_site_6269 iPseU_CNN:0.99997615814209;iRNA_PseU:0 6270 chr12 102789973 102789973 1 + C A rs191010552 102789973 - 102789953 102789993 41 CACACTTATAGGCCAAGTGTGATAAATAAACTTACAGACAC CACACTTATAGGCCAAGTGTTATAAATAAACTTACAGACAC Direct Gain 0 0.946590641929172 0 0.0469451546669006 prediction 0.893181283858343 Functional Gain - IGF1 ENSG00000017427 UTR3 Human protein_coding chr12:102789973 chr12:102789973 . . 0 21 hPsi_associated_SNPs_107310 0 0 0 0 0 Endoplasmic reticulum 0 0.438725947453414 0 0 hPsi_site_6270 iPseU_CNN:0;iRNA_PseU:0 6271 chrX 1761731 1761731 1 + G A SKCM 1761731 - 1761711 1761751 41 CAGAGGACCTCGCCTGTCTTCATCCAGGAGGCTTTCAATTA CAGAGGACCTCGCCTGTCTTTATCCAGGAGGCTTTCAATTA Direct Gain 0 0.946589517176023 0 0.999999761581421 prediction 0.893179034352045 Functional Gain - ASMT ENSG00000196433 CDS Human protein_coding chrX:1761731 chrX:1761731 nonsynonymous SNV 0.145 0 21 hPsi_associated_SNPs_107311 0 0 0 0 0 exosome 0 0.438717618206287 0.999999523162842 0 hPsi_site_6271 iPseU_CNN:0.999999523162842;iRNA_PseU:0 6272 chr2 239342233 239342233 1 + G T HNSC 239342233 + 239342213 239342253 41 GGCTGAGGGAGCAATTTTGTGATCATCCGCTGGAGCACTGT GGCTGAGGGAGCAATTTTGTTATCATCCGCTGGAGCACTGT Direct Gain 0 0.946588075597842 0 0.703624129295349 prediction 0.893176151195684 Functional Gain - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239342233 chr2:239342233 nonsynonymous SNV 0.980 4 21 hPsi_associated_SNPs_107312 0 0 1 0 1 Ribosome 0 0.438718505516809 0.407248258590698 0 hPsi_site_6272 iPseU_CNN:0.407248258590698;iRNA_PseU:0 6273 chr16 89167458 89167458 1 + C A rs6500529 89167458 - 89167438 89167478 41 GGATGCTTCCTGTAGAGGGGGACTGCCACACCGCCACTCAT GGATGCTTCCTGTAGAGGGGTACTGCCACACCGCCACTCAT Direct Gain 0 0.946586612061777 0 0.994569420814514 prediction 0.893173224123554 Functional Gain - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89167458 chr16:89167458 synonymous SNV . 0 21 hPsi_associated_SNPs_107313 1 0 0 0 0 chromatin 0 0.438714928344237 0.989138841629028 0 hPsi_site_6273 iPseU_CNN:0.989138841629028;iRNA_PseU:0 6274 chr10 43326529 43326529 1 + G A rs145950224 43326529 - 43326509 43326549 41 AAGGCTCACTGCAATTGGCCCTCAGCCCCCTTCAAACTGGA AAGGCTCACTGCAATTGGCCTTCAGCCCCCTTCAAACTGGA Direct Gain 0 0.946581122391602 0 0.999115645885468 prediction 0.893162244783204 Functional Gain - BMS1 ENSG00000165733 CDS Human protein_coding chr10:43326529 chr10:43326529 synonymous SNV . 0 21 hPsi_associated_SNPs_107314 0 0 0 0 0 chromatin 0 0.438718697455189 0.998231291770936 0 hPsi_site_6274 iPseU_CNN:0.998231291770936;iRNA_PseU:0 6275 chr6 142741159 142741159 1 + G A LUAD 142741159 - 142741139 142741179 41 AAGAATGCAAAACCCCATGTCATGCCCAACAGAAAGGTCAA AAGAATGCAAAACCCCATGTTATGCCCAACAGAAAGGTCAA Direct Gain 0 0.946577622047676 0 0.984480500221252 prediction 0.893155244095353 Functional Gain - ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142741159 chr6:142741159 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_107315 0 0 0 0 0 Ribosome 0 0.438718464056471 0.968961000442504 0 hPsi_site_6275 iPseU_CNN:0.968961000442504;iRNA_PseU:0 6276 chr16 66638092 66638092 1 + G A rs75704624 66638092 - 66638072 66638112 41 CAACCCATTCTCAGAGGACTCTCAGACCTGCAAGCGCAGCT CAACCCATTCTCAGAGGACTTTCAGACCTGCAAGCGCAGCT Direct Gain 0 0.946570152439787 0 0.999871611595154 prediction 0.893140304879574 Functional Gain - CMTM3 ENSG00000140931 UTR5 Human protein_coding chr16:66638092 chr16:66638092 . . 0 21 hPsi_associated_SNPs_107316 0 0 0 0 0 Cytosol 0 0.438713896009519 0.999743223190308 0 hPsi_site_6276 iPseU_CNN:0.999743223190308;iRNA_PseU:0 6277 chr2 233409180 233409180 1 + G T BLCA 233409180 + 233409160 233409200 41 GCTACAGAATGGCTCCTCGGGATGGTCGATCACAACTGGGG GCTACAGAATGGCTCCTCGGTATGGTCGATCACAACTGGGG Direct Gain 0 0.946563598476794 0 0.999995410442352 prediction 0.893127196953587 Functional Gain - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233409180 chr2:233409180 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107317 0 0 0 0 0 chromatin 0 0.476759436792148 0.999990820884704 0 hPsi_site_6277 iPseU_CNN:0.999990820884704;iRNA_PseU:0 6278 chr2 10186390 10186390 1 + T A SKCM 10186390 - 10186370 10186410 41 TGACCCCAGGAGCTCATACAAACAAGAGCCTCGACAGCTTC TGACCCCAGGAGCTCATACATACAAGAGCCTCGACAGCTTC Direct Gain 0 0.946545326598846 0 0.214277386665344 prediction 0.893090653197691 Functional Gain - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10186390 chr2:10186390 synonymous SNV . 0 21 hPsi_associated_SNPs_107318 0 0 0 0 0 nucleoplasm 0 0.436953868356117 0 0 hPsi_site_6278 iPseU_CNN:0;iRNA_PseU:0 6279 chr13 49281374 49281374 1 + G T LUAD 49281374 + 49281354 49281394 41 TTGTGCGTTTCCTGGCAATGGTTCACCCCTTTCGGCTTCTG TTGTGCGTTTCCTGGCAATGTTTCACCCCTTTCGGCTTCTG Direct Gain 0 0.946540209524811 0 0.997736930847168 prediction 0.893080419049623 Functional Gain - CYSLTR2 ENSG00000152207 CDS Human protein_coding chr13:49281374 chr13:49281374 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_107319 0 0 0 0 0 exosome 0 0.425518196704937 0.995473861694336 0 hPsi_site_6279 iPseU_CNN:0.995473861694336;iRNA_PseU:0 6280 chr4 70898893 70898893 1 + C A LUSC 70898893 - 70898873 70898913 41 TCTATAGCCTCGATGTGAATGATGCTTTTCCTGCATACACA TCTATAGCCTCGATGTGAATTATGCTTTTCCTGCATACACA Direct Gain 0 0.946535789384851 0 0.452667713165283 prediction 0.893071578769702 Functional Gain - HTN3 ENSG00000205649 CDS Human protein_coding chr4:70898893 chr4:70898893 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_107320 0 0 0 0 0 unknown 0 0.439367586751162 0 0 hPsi_site_6280 iPseU_CNN:0;iRNA_PseU:0 6281 chr7 97364151 97364151 1 + C A UCEC 97364151 - 97364131 97364171 41 TTGAACTTACTTTTGTGAGAGATCTGGCCATGTCCTAGAAG TTGAACTTACTTTTGTGAGATATCTGGCCATGTCCTAGAAG Direct Gain 0 0.946534056390318 0 0.924111306667328 prediction 0.893068112780635 Functional Gain - TAC1 ENSG00000006128 CDS Human protein_coding chr7:97364151 chr7:97364151 synonymous SNV . 0 21 hPsi_associated_SNPs_107321 0 0 0 0 0 exosome 0 0.438718592657488 0.848222613334656 0 hPsi_site_6281 iPseU_CNN:0.848222613334656;iRNA_PseU:0 6282 chr3 97806736 97806736 1 + C A UCEC 97806736 - 97806716 97806756 41 AGATGGGCGCCGCATGTGGAGAAGGCTTTGCTTCTGCCCTT AGATGGGCGCCGCATGTGGATAAGGCTTTGCTTCTGCCCTT Direct Gain 0 0.946532283998512 0 0.999967336654663 prediction 0.893064567997023 Functional Gain - OR5AC2 ENSG00000196578 CDS Human protein_coding chr3:97806736 chr3:97806736 nonsynonymous SNV 0.370 0 21 hPsi_associated_SNPs_107322 0 0 0 0 0 unknown 0 0.438718801626266 0.999934673309326 0 hPsi_site_6282 iPseU_CNN:0.999934673309326;iRNA_PseU:0 6283 chr1 186017917 186017917 1 + G A UCEC 186017917 - 186017897 186017937 41 TCCAGCAACATTTGTTGCTTCACAAGTGTAACGACCAGTGT TCCAGCAACATTTGTTGCTTTACAAGTGTAACGACCAGTGT Direct Gain 0 0.946529503341985 0 0.999979257583618 prediction 0.89305900668397 Functional Gain - HMCN1 ENSG00000143341 CDS Human protein_coding chr1:186017917 chr1:186017917 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107323 0 0 0 0 0 nucleus 0 0.439554920330542 0.999958515167236 0 hPsi_site_6283 iPseU_CNN:0.999958515167236;iRNA_PseU:0 6284 chr11 33564067 33564067 1 + T A UCEC 33564067 - 33564047 33564087 41 GGAATGCCATTTTGTTGAGGATCCAGAAACACCTAGATGAG GGAATGCCATTTTGTTGAGGTTCCAGAAACACCTAGATGAG Direct Gain 0 0.946528609083621 0 0.00537204742431641 prediction 0.893057218167243 Functional Gain - KIAA1549L ENSG00000110427 CDS Human protein_coding chr11:33564067 chr11:33564067 nonsynonymous SNV 0.166 1 21 hPsi_associated_SNPs_107324 0 0 0 0 0 exosome 0 0.438718592638256 0 0 hPsi_site_6284 iPseU_CNN:0;iRNA_PseU:0 6285 chr7 100802415 100802415 1 + G A SARC 100802415 - 100802395 100802435 41 CTTCTTGGAGGTGTCCTGGACATCCCCCCCCATCAAAAACT CTTCTTGGAGGTGTCCTGGATATCCCCCCCCATCAAAAACT Direct Gain 0 0.946525033108239 0 0.30504697561264 prediction 0.893050066216478 Functional Gain - AP1S1 ENSG00000106367 CDS Human protein_coding chr7:100802415 chr7:100802415 nonsynonymous SNV 0.877 1 21 hPsi_associated_SNPs_107325 0 0 0 0 0 Ribosome 0 0.438718592995099 0 0 hPsi_site_6285 iPseU_CNN:0;iRNA_PseU:0 6286 chr5 80409506 80409506 1 + C T UCEC 80409506 + 80409486 80409526 41 AGTGAGGGCCAGAAAGCTGTCTTTGACTTCTCCCTTGAACT AGTGAGGGCCAGAAAGCTGTTTTTGACTTCTCCCTTGAACT Direct Gain 0 0.946519532937922 0 0.56040745973587 prediction 0.893039065875844 Functional Gain - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80409506 chr5:80409506 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_107326 0 0 1 0 0 Ribosome 0 0.438656598385855 0.12081491947174 0 hPsi_site_6286 iPseU_CNN:0.12081491947174;iRNA_PseU:0 6287 chr5 82815523 82815523 1 + C A UCEC 82815523 - 82815503 82815543 41 GAATCCGTAGCATAATGAGAGACGCCAGTTGTACTCTGGAG GAATCCGTAGCATAATGAGATACGCCAGTTGTACTCTGGAG Direct Gain 0 0.946519469769979 0 0.994893550872803 prediction 0.893038939539957 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82815523 chr5:82815523 synonymous SNV . 0 21 hPsi_associated_SNPs_107327 0 0 0 0 0 Ribosome 0 0.438685265707068 0.989787101745606 0 hPsi_site_6287 iPseU_CNN:0.989787101745606;iRNA_PseU:0 6288 chr8 27361174 27361174 1 + C T LUSC 27361174 + 27361154 27361194 41 TGCTCCGAGACCGCTAAAGTCTGCCTCCCCAAGAATTTCTC TGCTCCGAGACCGCTAAAGTTTGCCTCCCCAAGAATTTCTC Direct Gain 0 0.946510561380562 0 0.522285997867584 prediction 0.893021122761123 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27361174 chr8:27361174 synonymous SNV . 0 21 hPsi_associated_SNPs_107328 0 0 1 0 1 Cytosol 0 0.43871859299498 0.044571995735168 0 hPsi_site_6288 iPseU_CNN:0.044571995735168;iRNA_PseU:0 6289 chr2 73899550 73899550 1 + G A SKCM 73899550 - 73899530 73899570 41 GGTAAAGAGCATTTTCTCTTCATGTTTTTCTTCTGACCAAG GGTAAAGAGCATTTTCTCTTTATGTTTTTCTTCTGACCAAG Direct Gain 0 0.946499953089844 0 0.782394111156464 prediction 0.892999906179688 Functional Gain - ALMS1P1 ENSG00000163016 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:73899550 chr2:73899550 . . 0 21 hPsi_associated_SNPs_107329 0 0 0 0 0 unknown 0 0.438687808705142 0.564788222312928 0 hPsi_site_6289 iPseU_CNN:0.564788222312928;iRNA_PseU:0 6290 chr16 28834421 28834421 1 + C T rs189978904 28834421 + 28834401 28834441 41 GCGCTTCCTCGCGCCGCGGTCTTCTCTCTCCACCCCCGACA GCGCTTCCTCGCGCCGCGGTTTTCTCTCTCCACCCCCGACA Direct Gain 0 0.946497908252353 0 0.0829550623893738 prediction 0.892995816504706 Functional Gain - ATXN2L ENSG00000168488 UTR5 Human protein_coding chr16:28834421 chr16:28834421 . . 0 21 hPsi_associated_SNPs_107330 0 0 1 0 0 Cytosol 0 0.438718538851867 0 0 hPsi_site_6290 iPseU_CNN:0;iRNA_PseU:0 6291 chr1 186135324 186135324 1 + G A ESCA 186135324 - 186135304 186135344 41 GGGATTCCCTGCTGCACATTCATCCTCATCTTAAAGAAGAA GGGATTCCCTGCTGCACATTTATCCTCATCTTAAAGAAGAA Direct Gain 0 0.946496870685194 0 0.991173326969147 prediction 0.892993741370387 Functional Gain - HMCN1 ENSG00000143341 CDS Human protein_coding chr1:186135324 chr1:186135324 nonsynonymous SNV 0.996 5 21 hPsi_associated_SNPs_107331 0 0 0 0 0 nucleus 0 0.438718593946587 0.982346653938294 0 hPsi_site_6291 iPseU_CNN:0.982346653938294;iRNA_PseU:0 6292 chr1 158450300 158450300 1 + C A LUAD 158450300 - 158450280 158450320 41 ACAAATTCGTTAACATCTGTGTTGGTACAAGCCAGAAGAAT ACAAATTCGTTAACATCTGTTTTGGTACAAGCCAGAAGAAT Direct Gain 0 0.946487182350092 0 0.998480081558228 prediction 0.892974364700184 Functional Gain - OR10R2 ENSG00000198965 CDS Human protein_coding chr1:158450300 chr1:158450300 nonsynonymous SNV 0.009 1 21 hPsi_associated_SNPs_107332 0 0 0 0 0 unknown 0 0.438718592995206 0.996960163116456 0 hPsi_site_6292 iPseU_CNN:0.996960163116456;iRNA_PseU:0 6293 chr5 80390805 80390805 1 + C A BLCA 80390805 - 80390785 80390825 41 AGCCACTTTCTTACCTGACTGATGTCACTCATCCAGGCAGC AGCCACTTTCTTACCTGACTTATGTCACTCATCCAGGCAGC Direct Gain 0 0.946484933514114 0 0.474364995956421 prediction 0.892969867028229 Functional Gain - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80390805 chr5:80390805 synonymous SNV . 0 21 hPsi_associated_SNPs_107333 0 0 0 0 0 Ribosome 0 0.438717703813513 0 0 hPsi_site_6293 iPseU_CNN:0;iRNA_PseU:0 6294 chr5 23527432 23527432 1 + G T UCEC 23527432 + 23527412 23527452 41 CAGAGGACACACACAGGGGAGAAGCCCTATGTCTGCAGGGA CAGAGGACACACACAGGGGATAAGCCCTATGTCTGCAGGGA Direct Gain 0 0.946483475659193 0 0.934898853302002 prediction 0.892966951318385 Functional Gain - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527432 chr5:23527432 nonsynonymous SNV 0.956 3 21 hPsi_associated_SNPs_107334 0 0 1 0 0 unknown 0 0.438723477116342 0.869797706604004 0 hPsi_site_6294 iPseU_CNN:0.869797706604004;iRNA_PseU:0 6295 chr7 143807023 143807023 1 + G T CESC 143807023 + 143807003 143807043 41 GAGTGCCTGATTTTGGTGGTGATGTCCTATGATAGGTATGT GAGTGCCTGATTTTGGTGGTTATGTCCTATGATAGGTATGT Direct Gain 0 0.946472560865394 0 2.89082527160645e-05 prediction 0.892945121730788 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807023 chr7:143807023 synonymous SNV . 0 21 hPsi_associated_SNPs_107335 0 0 0 0 0 unknown 0 0.438723283659999 0 0 hPsi_site_6295 iPseU_CNN:0;iRNA_PseU:0 6296 chr12 74931651 74931651 1 + G A rs149090705 74931651 - 74931631 74931671 41 GCTGCGCCTGGCCCAGGACTCACCGCCAAACCGTCTCAGCG GCTGCGCCTGGCCCAGGACTTACCGCCAAACCGTCTCAGCG Direct Gain 0 0.94647123140609 0 0.999996542930603 prediction 0.89294246281218 Functional Gain - ATXN7L3B ENSG00000253719 UTR5 Human protein_coding chr12:74931651 chr12:74931651 . . 0 21 hPsi_associated_SNPs_107336 0 0 0 0 0 Ribosome 0 0.438714897708865 0.999993085861206 0 hPsi_site_6296 iPseU_CNN:0.999993085861206;iRNA_PseU:0 6297 chr11 126873714 126873714 1 + G A rs11220699 126873714 - 126873694 126873734 41 GGTGGGGGGCGGGCCAGGGGCTCACAGGACCCAGCACTTGG GGTGGGGGGCGGGCCAGGGGTTCACAGGACCCAGCACTTGG Direct Gain 0 0.946470595767738 0 0.487462729215622 prediction 0.892941191535476 Functional Gain - KIRREL3-AS3 ENSG00000218109;ENSG00000256527 ncRNA_exonic Human other chr11:126873714 chr11:126873714 . . 0 21 hPsi_associated_SNPs_107337 0 0 0 0 0 unknown 0 0.438718593104429 0 0 hPsi_site_6297 iPseU_CNN:0;iRNA_PseU:0 6298 chr6 38790648 38790648 1 + G A CESC 38790648 - 38790628 38790668 41 ACCCCCGGGTAAAAATTCTTCAGCTTCCTCGCAGGAATAGC ACCCCCGGGTAAAAATTCTTTAGCTTCCTCGCAGGAATAGC Direct Gain 0 0.94647055804525 0 0.998824179172516 prediction 0.8929411160905 Functional Gain - DNAH8 ENSG00000124721 CDS Human protein_coding chr6:38790648 chr6:38790648 synonymous SNV . 0 21 hPsi_associated_SNPs_107338 0 0 0 0 0 chromatin 0 0.43871859289224 0.997648358345032 0 hPsi_site_6298 iPseU_CNN:0.997648358345032;iRNA_PseU:0 6299 chr1 53537269 53537269 1 + G A BLCA 53537269 - 53537249 53537289 41 AGGCGGTTGTTTTGCAGGTTCAGCGTCTCCAGCCGGTGCAG AGGCGGTTGTTTTGCAGGTTTAGCGTCTCCAGCCGGTGCAG Direct Gain 0 0.946468891316083 0 0.00135818123817444 prediction 0.892937782632166 Functional Gain - PODN ENSG00000174348 CDS Human protein_coding chr1:53537269 chr1:53537269 synonymous SNV . 0 21 hPsi_associated_SNPs_107339 0 0 0 0 0 Cytosol 0 0.438718322097731 0 0 hPsi_site_6299 iPseU_CNN:0;iRNA_PseU:0 6300 chr16 67645069 67645069 1 + G T UCEC 67645069 + 67645049 67645089 41 AACAGCCCATAAACATAGGAGAACTTCAGCTTGTTCAAGTA AACAGCCCATAAACATAGGATAACTTCAGCTTGTTCAAGTA Direct Gain 0 0.946462975678551 0 0.411032378673553 prediction 0.892925951357103 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67645069 chr16:67645069 stopgain 1.000 1 21 hPsi_associated_SNPs_107340 0 0 1 0 0 Nucleus 0 0.438718518079833 0 0 hPsi_site_6300 iPseU_CNN:0;iRNA_PseU:0 6301 chr19 13988397 13988397 1 + G A BLCA 13988397 - 13988377 13988417 41 GTGTGGCGCCGCACTGGGGACACACGTAGTCCCGCAGGATG GTGTGGCGCCGCACTGGGGATACACGTAGTCCCGCAGGATG Direct Gain 0 0.94646194557575 0 0.983909845352173 prediction 0.8929238911515 Functional Gain - NANOS3 ENSG00000187556 CDS Human protein_coding chr19:13988397 chr19:13988397 nonsynonymous SNV 0.919 5 21 hPsi_associated_SNPs_107341 0 0 0 0 0 exosome 0 0.4387200720775 0.967819690704346 0 hPsi_site_6301 iPseU_CNN:0.967819690704346;iRNA_PseU:0 6302 chr1 89847482 89847482 1 + C T SKCM 89847482 + 89847462 89847502 41 AGGGAAGCCATTGCAATCTTCATGGAGCACTCCTTCAAGGA AGGGAAGCCATTGCAATCTTTATGGAGCACTCCTTCAAGGA Direct Gain 0 0.946457384453656 0 0.99959135055542 prediction 0.892914768907313 Functional Gain - GBP6 ENSG00000183347 CDS Human protein_coding chr1:89847482 chr1:89847482 synonymous SNV . 0 21 hPsi_associated_SNPs_107342 0 0 0 0 1 exosome 0 0.438718624936772 0.99918270111084 0 hPsi_site_6302 iPseU_CNN:0.99918270111084;iRNA_PseU:0 6303 chr13 39613778 39613778 1 + C T COAD 39613778 + 39613758 39613798 41 GCCTGGAATTATACAGTTGACACACCTCATGGTATATTTGC GCCTGGAATTATACAGTTGATACACCTCATGGTATATTTGC Direct Gain 0 0.946456813949289 0 0.39366751909256 prediction 0.892913627898579 Functional Gain - NHLRC3 ENSG00000188811 CDS Human protein_coding chr13:39613778 chr13:39613778 synonymous SNV . 0 21 hPsi_associated_SNPs_107343 0 0 0 0 2 Endoplasmic reticulum 0 0.438854576578403 0 0 hPsi_site_6303 iPseU_CNN:0;iRNA_PseU:0 6304 chr17 78399375 78399375 1 + G A ESCA 78399375 - 78399355 78399395 41 AACCTGCAGCAGCAGCAAGTCAGGCGCACAGCGGCCTCCAG AACCTGCAGCAGCAGCAAGTTAGGCGCACAGCGGCCTCCAG Direct Gain 0 0.946452676852647 0 0.999998390674591 prediction 0.892905353705293 Functional Gain - ENDOV ENSG00000173818 CDS Human protein_coding chr17:78399375 chr17:78399375 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107344 0 0 0 0 0 Ribosome 0 0.438720806156895 0.999996781349182 0 hPsi_site_6304 iPseU_CNN:0.999996781349182;iRNA_PseU:0 6305 chr12 72097810 72097810 1 + C T rs112507683 72097810 + 72097790 72097830 41 GAAAGAGCTCTATGTAACAGCATAATAAAACTGCCTACCTA GAAAGAGCTCTATGTAACAGTATAATAAAACTGCCTACCTA Direct Gain 0 0.946449296672994 0 0.0358963012695312 prediction 0.892898593345989 Functional Gain - TMEM19 ENSG00000139291 CDS Human protein_coding chr12:72097810 chr12:72097810 synonymous SNV . 0 21 hPsi_associated_SNPs_107345 0 0 1 0 0 Endoplasmic reticulum 0 0.438718592467449 0 0 hPsi_site_6305 iPseU_CNN:0;iRNA_PseU:0 6306 chr14 56765103 56765103 1 + G T rs114059878 56765103 + 56765083 56765123 41 ATAGGAGCTCCACCATTCCTGTTACTTTCATTTCATTTTGA ATAGGAGCTCCACCATTCCTTTTACTTTCATTTCATTTTGA Direct Gain 0 0.946443781171599 0 0.244119942188263 prediction 0.892887562343197 Functional Gain - PELI2 ENSG00000139946 UTR3 Human protein_coding chr14:56765103 chr14:56765103 . . 0 21 hPsi_associated_SNPs_107346 0 0 1 2 0 nucleus 0 0.43870069546712 0 0 hPsi_site_6306 iPseU_CNN:0;iRNA_PseU:0 6307 chr1 45271013 45271013 1 + C A THCA 45271013 - 45270993 45271033 41 AAACAGCATGAGGAGAGCCTGATCCGTCTTGACCCACTGCA AAACAGCATGAGGAGAGCCTTATCCGTCTTGACCCACTGCA Direct Gain 0 0.94644050220305 0 0.0154044926166534 prediction 0.892881004406101 Functional Gain - PLK3 ENSG00000173846 CDS Human protein_coding chr1:45271013 chr1:45271013 nonsynonymous SNV 0.997 0 21 hPsi_associated_SNPs_107347 0 0 0 0 0 Cytosol 0 0.43867712832931 0 0 hPsi_site_6307 iPseU_CNN:0;iRNA_PseU:0 6308 chr16 67318778 67318778 1 + G A BLCA 67318778 - 67318758 67318798 41 GCACTCCTGGCGGATGGCCTCTGAGCCCAGCCCCGTGGCCA GCACTCCTGGCGGATGGCCTTTGAGCCCAGCCCCGTGGCCA Direct Gain 0 0.946435504908298 0 0.999380528926849 prediction 0.892871009816596 Functional Gain - PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67318778 chr16:67318778 nonsynonymous SNV 0.840 2 21 hPsi_associated_SNPs_107348 0 0 0 0 0 Cytosol 0 0.438718558173453 0.998761057853698 0 hPsi_site_6308 iPseU_CNN:0.998761057853698;iRNA_PseU:0 6309 chr19 2216303 2216303 1 + G A BLCA 2216303 - 2216283 2216323 41 AGCTCCTGCTGCCGCTGGCTCTTCTCTAGCTCCACAATGCT AGCTCCTGCTGCCGCTGGCTTTTCTCTAGCTCCACAATGCT Direct Gain 0 0.946432773087829 0 0.591531276702881 prediction 0.892865546175657 Functional Gain - DOT1L ENSG00000104885 CDS Human protein_coding chr19:2216303 chr19:2216303 synonymous SNV . 0 21 hPsi_associated_SNPs_107349 0 0 0 0 0 Cytosol 0 0.438649722953155 0.183062553405762 0 hPsi_site_6309 iPseU_CNN:0.183062553405762;iRNA_PseU:0 6310 chr19 56466597 56466597 1 + C T SKCM 56466597 + 56466577 56466617 41 GAAAACACCATTCTCTTCTCCATGTGCCGGGTCCCTGTGGT GAAAACACCATTCTCTTCTCTATGTGCCGGGTCCCTGTGGT Direct Gain 0 0.946431249345145 0 0.602733135223389 prediction 0.89286249869029 Functional Gain - NLRP8 ENSG00000179709 CDS Human protein_coding chr19:56466597 chr19:56466597 synonymous SNV . 0 21 hPsi_associated_SNPs_107350 0 0 0 0 0 unknown 0 0.438834801775099 0.205466270446778 0 hPsi_site_6310 iPseU_CNN:0.205466270446778;iRNA_PseU:0 6311 chr17 77897502 77897502 1 + C T rs66490734 77897502 + 77897482 77897522 41 TTTGAGGCTGGGCACGGTGGCTCACACCTGTTATCCCAACA TTTGAGGCTGGGCACGGTGGTTCACACCTGTTATCCCAACA Direct Gain 0 0.946429354620519 0 0.999852061271667 prediction 0.892858709241037 Functional Gain - LINC01978 ENSG00000262188 ncRNA_exonic Human lincRNA chr17:77897502 chr17:77897502 . . 0 21 hPsi_associated_SNPs_107351 0 0 0 0 0 unknown 0 0.440986319753302 0.999704122543334 0 hPsi_site_6311 iPseU_CNN:0.999704122543334;iRNA_PseU:0 6312 chr11 55861574 55861574 1 + C T LUSC 55861574 + 55861554 55861594 41 CTATTTGCAACCTGATAACACATCATCGCTGACCCAGGCGC CTATTTGCAACCTGATAACATATCATCGCTGACCCAGGCGC Direct Gain 0 0.946427333288644 0 0.989970922470093 prediction 0.892854666577288 Functional Gain - OR8I2 ENSG00000172154 CDS Human protein_coding chr11:55861574 chr11:55861574 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107352 0 0 0 0 0 unknown 0 0.438496091822828 0.979941844940186 0 hPsi_site_6312 iPseU_CNN:0.979941844940186;iRNA_PseU:0 6313 chr12 4870276 4870276 1 + C T UCEC 4870276 + 4870256 4870296 41 TGGATGGATGAGCACAAACACATGGTCTACTTGGCCTGGAA TGGATGGATGAGCACAAACATATGGTCTACTTGGCCTGGAA Direct Gain 0 0.946423676906477 0 0.999718725681305 prediction 0.892847353812954 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4870276 chr12:4870276 synonymous SNV . 0 21 hPsi_associated_SNPs_107353 0 0 0 0 1 cytosol 0 0.439304708219062 0.99943745136261 0 hPsi_site_6313 iPseU_CNN:0.99943745136261;iRNA_PseU:0 6314 chr16 1258038 1258038 1 + G A COAD 1258038 - 1258018 1258058 41 TCCAGGTGCCCGTTGGGGGTCACGGCCAGGGAACACATCTT TCCAGGTGCCCGTTGGGGGTTACGGCCAGGGAACACATCTT Direct Gain 0 0.946418283298392 0 0.599363923072815 prediction 0.892836566596784 Functional Gain - CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1258038 chr16:1258038 synonymous SNV . 0 21 hPsi_associated_SNPs_107354 0 0 0 0 0 nucleolus 0 0.438718681992699 0.19872784614563 0 hPsi_site_6314 iPseU_CNN:0.19872784614563;iRNA_PseU:0 6315 chr7 114657969 114657969 1 + G A rs184032580 114657969 - 114657949 114657989 41 AACCACAGGTGATATATTCTCATGCTTCAGGTTAAAAACCT AACCACAGGTGATATATTCTTATGCTTCAGGTTAAAAACCT Direct Gain 0 0.946417703214783 0 0.968872427940369 prediction 0.892835406429567 Functional Gain - MDFIC ENSG00000135272 UTR3 Human protein_coding chr7:114657969 chr7:114657969 . . 0 21 hPsi_associated_SNPs_107355 0 0 0 0 0 Cytosol 0 0.438718592990936 0.937744855880738 0 hPsi_site_6315 iPseU_CNN:0.937744855880738;iRNA_PseU:0 6316 chr15 75942049 75942049 1 + G A UCEC 75942049 - 75942029 75942069 41 GCGATCTTGGCCATCATGGGCACATCACCCAGGATGAAGGC GCGATCTTGGCCATCATGGGTACATCACCCAGGATGAAGGC Direct Gain 0 0.946412732529387 0 0.999596774578094 prediction 0.892825465058774 Functional Gain - SNX33 ENSG00000173548 CDS Human protein_coding chr15:75942049 chr15:75942049 synonymous SNV . 0 21 hPsi_associated_SNPs_107356 0 0 0 0 0 membrane 0 0.438721255719732 0.999193549156188 0 hPsi_site_6316 iPseU_CNN:0.999193549156188;iRNA_PseU:0 6317 chr1 173703194 173703194 1 + G T LUAD 173703194 + 173703174 173703214 41 GAGAGGGCTATGGAATTACTGATTGACTTTGCGTATACCTC GAGAGGGCTATGGAATTACTTATTGACTTTGCGTATACCTC Direct Gain 0 0.946409563177627 0 0.996519923210144 prediction 0.892819126355254 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173703194 chr1:173703194 synonymous SNV . 0 21 hPsi_associated_SNPs_107357 0 0 1 0 0 Cytosol 0 0.43871881796387 0.993039846420288 0 hPsi_site_6317 iPseU_CNN:0.993039846420288;iRNA_PseU:0 6318 chr4 186997899 186997899 1 + G A BLCA 186997899 - 186997879 186997919 41 AGATCATCGGGTACCTGAGTCAACTTCAGGTGGCTGCAGTC AGATCATCGGGTACCTGAGTTAACTTCAGGTGGCTGCAGTC Direct Gain 0 0.946407551743275 0 0.999820828437805 prediction 0.892815103486549 Functional Gain - TLR3 ENSG00000164342 CDS Human protein_coding chr4:186997899 chr4:186997899 synonymous SNV . 0 21 hPsi_associated_SNPs_107358 0 0 0 0 0 exosome 0 0.438717917884964 0.99964165687561 0 hPsi_site_6318 iPseU_CNN:0.99964165687561;iRNA_PseU:0 6319 chr11 64217674 64217674 1 + G A rs77263073 64217674 - 64217654 64217694 41 ATGCGTGGCCCTGAACTTGTCATTTTCCCTCTTCTAAGTGT ATGCGTGGCCCTGAACTTGTTATTTTCCCTCTTCTAAGTGT Direct Gain 0 0.946398551103634 0 0.328531622886658 prediction 0.892797102207268 Functional Gain - LOC100996455 ENSG00000181908 UTR3 Human lincRNA chr11:64217674 chr11:64217674 . . 0 21 hPsi_associated_SNPs_107359 0 0 0 0 0 unknown 0 0.438718577404688 0 0 hPsi_site_6319 iPseU_CNN:0;iRNA_PseU:0 6320 chr19 55148212 55148212 1 + G A LIHC 55148212 - 55148192 55148232 41 CTGTGCAGCTGGGCGTAGGTCACATCCTGGGGGGCTTCAGA CTGTGCAGCTGGGCGTAGGTTACATCCTGGGGGGCTTCAGA Direct Gain 0 0.946397674662223 0 0.999995410442352 prediction 0.892795349324447 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55148212 chr19:55148212 synonymous SNV . 0 21 hPsi_associated_SNPs_107360 0 0 0 0 0 exosome 0 0.43933853375508 0.999990820884704 0 hPsi_site_6320 iPseU_CNN:0.999990820884704;iRNA_PseU:0 6321 chr5 32089981 32089981 1 + C A COAD 32089981 - 32089961 32090001 41 AGATGGGAGTGAGGATGGATGACTTGTGGATGATTCTGCGA AGATGGGAGTGAGGATGGATTACTTGTGGATGATTCTGCGA Direct Gain 0 0.946394784688706 0 0.999972820281982 prediction 0.892789569377411 Functional Gain - PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32089981 chr5:32089981 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_107361 0 0 1 0 0 chromatin 0 0.438720412510527 0.999945640563964 0 hPsi_site_6321 iPseU_CNN:0.999945640563964;iRNA_PseU:0 6322 chr13 103474453 103474453 1 + G T SARC 103474453 + 103474433 103474473 41 TGACCACTTCCATGTAAAAGGATGCTCTTATGTTCTATATA TGACCACTTCCATGTAAAAGTATGCTCTTATGTTCTATATA Direct Gain 0 0.946392312405902 0 0.985532283782959 prediction 0.892784624811803 Functional Gain - BIVM;BIVM-ERCC5 ENSG00000134897;ENSG00000270181 CDS Human other chr13:103474453 chr13:103474453 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107362 0 0 1 0 2 unknown 0 0.438655860452849 0.971064567565918 0 hPsi_site_6322 iPseU_CNN:0.971064567565918;iRNA_PseU:0 6323 chr9 135944591 135944591 1 + G A BRCA 135944591 - 135944571 135944611 41 GGTGGGCACCAGGAAGAGGACATCGGTCTCAAAGTCCACCA GGTGGGCACCAGGAAGAGGATATCGGTCTCAAAGTCCACCA Direct Gain 0 0.946388211425354 0 0.999918460845947 prediction 0.892776422850707 Functional Gain - CEL ENSG00000170835 CDS Human protein_coding chr9:135944591 chr9:135944591 nonsynonymous SNV 0.639 0 21 hPsi_associated_SNPs_107363 0 0 0 0 0 exosome 0 0.438719915330342 0.999836921691894 0 hPsi_site_6323 iPseU_CNN:0.999836921691894;iRNA_PseU:0 6324 chr11 114059635 114059635 1 + G A rs10400344 114059635 - 114059615 114059655 41 TTTTGAGTGGCTCACTCCTTCACTTTTTAAGACTCTGCCCA TTTTGAGTGGCTCACTCCTTTACTTTTTAAGACTCTGCCCA Direct Gain 0 0.946386562283745 0 0.0768627524375916 prediction 0.89277312456749 Functional Gain - ZBTB16 ENSG00000109906 intronic Human protein_coding chr11:114059635 chr11:114059635 . . 0 21 hPsi_associated_SNPs_107364 0 0 0 0 0 Nucleus 0 0.438721515275967 0 0 hPsi_site_6324 iPseU_CNN:0;iRNA_PseU:0 6325 chr20 3008379 3008379 1 + C A rs144766586 3008379 - 3008359 3008399 41 AGAAGAGGGCCCTGGCTGGCGATATAGGAGTCCTTCTGCCG AGAAGAGGGCCCTGGCTGGCTATATAGGAGTCCTTCTGCCG Direct Gain 0 0.946371691129041 0 0.964248776435852 prediction 0.892743382258082 Functional Gain - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3008379 chr20:3008379 synonymous SNV . 0 21 hPsi_associated_SNPs_107365 0 0 0 0 0 Ribosome 0 0.43871796737818 0.928497552871704 0 hPsi_site_6325 iPseU_CNN:0.928497552871704;iRNA_PseU:0 6326 chr19 55325158 55325158 1 + G A SKCM 55325158 - 55325138 55325178 41 TGTCCCGCAGGCTCTTGGTTCATTACAGCAGCATCTGTAGG TGTCCCGCAGGCTCTTGGTTTATTACAGCAGCATCTGTAGG Direct Gain 0 0.946368894031895 0 0.994904756546021 prediction 0.89273778806379 Functional Gain - KIR2DL4 ENSG00000189013 CDS Human protein_coding chr19:55325158 chr19:55325158 nonsynonymous SNV 0.015 1 21 hPsi_associated_SNPs_107366 0 0 0 0 0 exosome 0 0.438692009807713 0.989809513092042 0 hPsi_site_6326 iPseU_CNN:0.989809513092042;iRNA_PseU:0 6327 chr16 30733927 30733927 1 + C T SKCM 30733927 + 30733907 30733947 41 GCAGGGGGGCAGCACCATCTCATCAGCCAGCCTGCCCATGT GCAGGGGGGCAGCACCATCTTATCAGCCAGCCTGCCCATGT Direct Gain 0 0.946366716611631 0 0.996935725212097 prediction 0.892733433223263 Functional Gain - SRCAP ENSG00000080603 CDS Human protein_coding chr16:30733927 chr16:30733927 synonymous SNV . 0 21 hPsi_associated_SNPs_107367 0 0 1 0 1 Ribosome 0 0.438718593074202 0.993871450424194 0 hPsi_site_6327 iPseU_CNN:0.993871450424194;iRNA_PseU:0 6328 chr2 29320680 29320680 1 + G A rs7598888 29320680 - 29320660 29320700 41 AAATGGGTGTTTTCATACTGCACTCCCTGAGGCCCCTGTGC AAATGGGTGTTTTCATACTGTACTCCCTGAGGCCCCTGTGC Direct Gain 0 0.946365756893246 0 0.999980807304382 prediction 0.892731513786492 Functional Gain - CLIP4 ENSG00000115295 UTR5 Human protein_coding chr2:29320680 chr2:29320680 . . 0 21 hPsi_associated_SNPs_107368 0 0 0 0 0 nucleus 0 0.438723014260364 0.999961614608764 0 hPsi_site_6328 iPseU_CNN:0.999961614608764;iRNA_PseU:0 6329 chr17 7256621 7256621 1 + C T KIRP 7256621 + 7256601 7256641 41 CTGAGCTCCGTCCAGGTGGACACCTTCCGAGCCAACCTTTT CTGAGCTCCGTCCAGGTGGATACCTTCCGAGCCAACCTTTT Direct Gain 0 0.946365595398516 0 0.999993920326233 prediction 0.892731190797031 Functional Gain - KCTD11 ENSG00000213859 CDS Human protein_coding chr17:7256621 chr17:7256621 synonymous SNV . 0 21 hPsi_associated_SNPs_107369 0 0 0 0 0 exosome 0 0.438718592945697 0.999987840652466 0 hPsi_site_6329 iPseU_CNN:0.999987840652466;iRNA_PseU:0 6330 chr16 67701881 67701881 1 + G A LUSC 67701881 - 67701861 67701901 41 TTTGGCAGATGGTGAGGGCTCACTCTGGCTGTCCTCTGGCT TTTGGCAGATGGTGAGGGCTTACTCTGGCTGTCCTCTGGCT Direct Gain 0 0.946363252339375 0 0.997761845588684 prediction 0.892726504678749 Functional Gain - C16orf86 ENSG00000159761 CDS Human protein_coding chr16:67701881 chr16:67701881 nonsynonymous SNV 0.727 1 21 hPsi_associated_SNPs_107370 0 0 0 0 0 exosome 0 0.438717365774816 0.995523691177368 0 hPsi_site_6330 iPseU_CNN:0.995523691177368;iRNA_PseU:0 6331 chr17 27003342 27003342 1 + G A KIRC 27003342 - 27003322 27003362 41 TTTCAAAGATGCTCCTACGGCTCACACGCTTCTTGGTGGTC TTTCAAAGATGCTCCTACGGTTCACACGCTTCTTGGTGGTC Direct Gain 0 0.946361356999991 0 0.987971186637878 prediction 0.892722713999982 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27003342 chr17:27003342 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107371 0 0 0 0 0 Cytosol 0 0.438786673247188 0.975942373275756 0 hPsi_site_6331 iPseU_CNN:0.975942373275756;iRNA_PseU:0 6332 chr5 139494516 139494516 1 + G A LAML 139494516 - 139494496 139494536 41 ATGGAGTTGCGATAGGTGGGCTTCACCTCGCTCACTCGCAT ATGGAGTTGCGATAGGTGGGTTTCACCTCGCTCACTCGCAT Direct Gain 0 0.946360555067351 0 0.633241295814514 prediction 0.892721110134703 Functional Gain - PURA ENSG00000185129 CDS Human protein_coding chr5:139494516 chr5:139494516 synonymous SNV . 0 21 hPsi_associated_SNPs_107372 0 0 0 0 0 Ribosome 0 0.438718593003933 0.266482591629028 0 hPsi_site_6332 iPseU_CNN:0.266482591629028;iRNA_PseU:0 6333 chr5 149361966 149361966 1 + C T rs1046710 149361966 + 149361946 149361986 41 GGCACAGTCTCATCAGAAGTCTAATACCTGGGCAGGTTTAT GGCACAGTCTCATCAGAAGTTTAATACCTGGGCAGGTTTAT Direct Gain 0 0.946357623522154 0 0.999962508678436 prediction 0.892715247044308 Functional Gain - SLC26A2 ENSG00000155850 UTR3 Human protein_coding chr5:149361966 chr5:149361966 . . 0 21 hPsi_associated_SNPs_107373 5 0 1 0 0 Endoplasmic reticulum 0 0.438716787082792 0.999925017356872 0 hPsi_site_6333 iPseU_CNN:0.999925017356872;iRNA_PseU:0 6334 chr17 26862090 26862090 1 + C T SKCM 26862090 + 26862070 26862110 41 CTGCCCACACCCCACCCAGCCACAGTGCCAAGCTACTGGCC CTGCCCACACCCCACCCAGCTACAGTGCCAAGCTACTGGCC Direct Gain 0 0.946356777711059 0 0.997847676277161 prediction 0.892713555422117 Functional Gain - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26862090 chr17:26862090 nonsynonymous SNV 0.995 1 21 hPsi_associated_SNPs_107374 0 0 0 0 0 exosome 0 0.438718592995067 0.995695352554322 0 hPsi_site_6334 iPseU_CNN:0.995695352554322;iRNA_PseU:0 6335 chr14 31355479 31355479 1 + G A ESCA 31355479 - 31355459 31355499 41 TGCAGGGCCTTGGACATCATCATAGGACTGCCCATCTGTGA TGCAGGGCCTTGGACATCATTATAGGACTGCCCATCTGTGA Direct Gain 0 0.946356666905699 0 0.981716334819794 prediction 0.892713333811398 Functional Gain - COCH ENSG00000100473 CDS Human protein_coding chr14:31355479 chr14:31355479 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107375 0 0 1 0 1 Cytosol 0 0.438828103223908 0.963432669639588 0 hPsi_site_6335 iPseU_CNN:0.963432669639588;iRNA_PseU:0 6336 chr11 6578814 6578814 1 + C T UCEC 6578814 + 6578794 6578834 41 AGCAGGGGGATGAAGGAAAGCATAAGTCACAAGATAAGGCA AGCAGGGGGATGAAGGAAAGTATAAGTCACAAGATAAGGCA Direct Gain 0 0.946348956795521 0 0.937283039093018 prediction 0.892697913591042 Functional Gain - DNHD1 ENSG00000179532 CDS Human protein_coding chr11:6578814 chr11:6578814 synonymous SNV . 0 21 hPsi_associated_SNPs_107376 0 0 0 0 0 chromatin 0 0.438690472276422 0.874566078186036 0 hPsi_site_6336 iPseU_CNN:0.874566078186036;iRNA_PseU:0 6337 chr1 148594768 148594768 1 + T A rs587765319 148594768 - 148594748 148594788 41 TGGCATGGTTTGAGAATAGGAATAGAGCCATGCTCACTGAC TGGCATGGTTTGAGAATAGGTATAGAGCCATGCTCACTGAC Direct Gain 0 0.946347665461815 0 0.999395966529846 prediction 0.892695330923631 Functional Gain - NBPF25P ENSG00000243452 UTR3 Human other chr1:148594768 chr1:148594768 . . 0 21 hPsi_associated_SNPs_107377 0 0 0 0 0 unknown 0 0.438718591244456 0.998791933059692 0 hPsi_site_6337 iPseU_CNN:0.998791933059692;iRNA_PseU:0 6338 chr16 23767427 23767427 1 + C T SKCM 23767427 + 23767407 23767447 41 GCTTTGTCAGGGTCTTGGCTCATTTTCGCCCTGTAGAAGAT GCTTTGTCAGGGTCTTGGCTTATTTTCGCCCTGTAGAAGAT Direct Gain 0 0.946344461139451 0 0.954701781272888 prediction 0.892688922278902 Functional Gain - CHP2 ENSG00000166869 CDS Human protein_coding chr16:23767427 chr16:23767427 nonsynonymous SNV 0.993 1 21 hPsi_associated_SNPs_107378 0 0 0 0 2 nucleolus 0 0.438718480687617 0.909403562545776 0 hPsi_site_6338 iPseU_CNN:0.909403562545776;iRNA_PseU:0 6339 chr7 99454474 99454474 1 + C A UCEC 99454474 - 99454454 99454494 41 CTGGGAGTCGATCATCTGTTGAAAGAAATCTACTCGATGCT CTGGGAGTCGATCATCTGTTTAAAGAAATCTACTCGATGCT Direct Gain 0 0.946338387609842 0 0.999999761581421 prediction 0.892676775219684 Functional Gain - CYP3A43 ENSG00000021461 CDS Human protein_coding chr7:99454474 chr7:99454474 nonsynonymous SNV 0.009 2 21 hPsi_associated_SNPs_107379 0 0 0 0 0 cytosol 0 0.438716229571208 0.999999523162842 0 hPsi_site_6339 iPseU_CNN:0.999999523162842;iRNA_PseU:0 6340 chr19 39399395 39399395 1 + C T CESC 39399395 + 39399375 39399415 41 AATACGACGACATTGTGGTTCACAGCAGCCGCAGCCAAACC AATACGACGACATTGTGGTTTACAGCAGCCGCAGCCAAACC Direct Gain 0 0.9463383540523 0 0.967316150665283 prediction 0.892676708104599 Functional Gain - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39399395 chr19:39399395 nonsynonymous SNV 0.947 3 21 hPsi_associated_SNPs_107380 0 0 1 0 1 Ribosome 0 0.438844342286793 0.934632301330566 0 hPsi_site_6340 iPseU_CNN:0.934632301330566;iRNA_PseU:0 6341 chr3 157840053 157840053 1 + G T COAD 157840053 + 157840033 157840073 41 AGTCAAGATCTTGGTCCAGAGATCTTCAGCCTCGTTCACAT AGTCAAGATCTTGGTCCAGATATCTTCAGCCTCGTTCACAT Direct Gain 0 0.946332517684212 0 0.989497423171997 prediction 0.892665035368424 Functional Gain - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157840053 chr3:157840053 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107381 0 0 1 0 1 Ribosome 0 0.438696175436982 0.978994846343994 0 hPsi_site_6341 iPseU_CNN:0.978994846343994;iRNA_PseU:0 6342 chr7 100349615 100349615 1 + C A LUSC 100349615 - 100349595 100349635 41 GGAATGGTGGGTTTTTCTGTGAGGATGGTGGGTTTTTCTGA GGAATGGTGGGTTTTTCTGTTAGGATGGTGGGTTTTTCTGA Direct Gain 0 0.946330393990699 0 0.00366941094398499 prediction 0.892660787981398 Functional Gain - ZAN ENSG00000146839 CDS Human protein_coding chr7:100349615 chr7:100349615 synonymous SNV . 0 21 hPsi_associated_SNPs_107382 0 0 0 0 0 cytosol 0 0.438718569552921 0 0 hPsi_site_6342 iPseU_CNN:0;iRNA_PseU:0 6343 chr10 47087599 47087599 1 + G A LUAD 47087599 - 47087579 47087619 41 AGCCAGAGCACAGCAAAGGCCACCACCATCACCACCAGCAC AGCCAGAGCACAGCAAAGGCTACCACCATCACCACCAGCAC Direct Gain 0 0.946330068500949 0 0.485588222742081 prediction 0.892660137001899 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087599 chr10:47087599 synonymous SNV . 0 21 hPsi_associated_SNPs_107383 0 0 0 0 0 unknown 0 0.438685327979301 0 0 hPsi_site_6343 iPseU_CNN:0;iRNA_PseU:0 6344 chr12 72680639 72680639 1 + C T BLCA 72680639 + 72680619 72680659 41 AAGATGGATGGGTTACGGATCACTTTTCACAGACCCCTCTC AAGATGGATGGGTTACGGATTACTTTTCACAGACCCCTCTC Direct Gain 0 0.946327651884103 0 0.999999463558197 prediction 0.892655303768206 Functional Gain - TRHDE ENSG00000072657 CDS Human protein_coding chr12:72680639 chr12:72680639 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107384 0 0 0 0 1 exosome 0 0.438718709988666 0.999998927116394 0 hPsi_site_6344 iPseU_CNN:0.999998927116394;iRNA_PseU:0 6345 chr16 90046414 90046414 1 + A T rs187527029 90046414 + 90046394 90046434 41 TTACCCCAAAAAAGTTTACTATTAAAGCTCAATATGAAGCC TTACCCCAAAAAAGTTTACTTTTAAAGCTCAATATGAAGCC Direct Gain 0 0.946327378357527 0 0.998174607753754 prediction 0.892654756715055 Functional Gain - AFG3L1P ENSG00000223959 ncRNA_exonic Human transcribed_unitary_pseudogene chr16:90046414 chr16:90046414 . . 0 21 hPsi_associated_SNPs_107385 0 0 1 0 0 unknown 0 0.438717806308973 0.996349215507508 0 hPsi_site_6345 iPseU_CNN:0.996349215507508;iRNA_PseU:0 6346 chr3 125822676 125822676 1 + C T CESC 125822676 + 125822656 125822696 41 TTGACCCGCAGGTACTCGTTCAGAGCCGCCTCTCCTGTAAG TTGACCCGCAGGTACTCGTTTAGAGCCGCCTCTCCTGTAAG Direct Gain 0 0.946324685428923 0 0.999990582466125 prediction 0.892649370857846 Functional Gain - ALDH1L1 ENSG00000144908 CDS Human protein_coding chr3:125822676 chr3:125822676 synonymous SNV . 0 21 hPsi_associated_SNPs_107386 0 0 0 0 1 cytosol 0 0.438718810022263 0.99998116493225 0 hPsi_site_6346 iPseU_CNN:0.99998116493225;iRNA_PseU:0 6347 chr1 161500947 161500947 1 + G A rs189663649 161500947 - 161500927 161500967 41 GCCGGGAATCGAACCCGGGTCAACTGCTTGGAAGGCAGCTA GCCGGGAATCGAACCCGGGTTAACTGCTTGGAAGGCAGCTA Direct Gain 0 0.946305731763786 0 0.999999105930328 prediction 0.892611463527572 Functional Gain - HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500947 chr1:161500947 . . 0 21 hPsi_associated_SNPs_107387 0 0 0 0 0 unknown 0 0.438718808198319 0.999998211860656 0 hPsi_site_6347 iPseU_CNN:0.999998211860656;iRNA_PseU:0 6348 chr15 74889602 74889602 1 + C T rs149490636 74889602 + 74889582 74889622 41 AAATTGATTCGCTTGCGGCTCACCTCAGTCGAGGAAGCCCT AAATTGATTCGCTTGCGGCTTACCTCAGTCGAGGAAGCCCT Direct Gain 0 0.946304425078214 0 0.999990463256836 prediction 0.892608850156427 Functional Gain - ARID3B ENSG00000179361 UTR3 Human protein_coding chr15:74889602 chr15:74889602 . . 0 21 hPsi_associated_SNPs_107388 0 0 0 0 0 Nucleus 0 0.438707954932297 0.999980926513672 0 hPsi_site_6348 iPseU_CNN:0.999980926513672;iRNA_PseU:0 6349 chr19 57954808 57954808 1 + C T rs61747534 57954808 + 57954788 57954828 41 CAATTCTGAAGGACATTCTGCACCTGGCTGAGCACGATGGA CAATTCTGAAGGACATTCTGTACCTGGCTGAGCACGATGGA Direct Gain 0 0.946301373158477 0 0.997708320617676 prediction 0.892602746316954 Functional Gain - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57954808 chr19:57954808 nonsynonymous SNV 0.002 0 21 hPsi_associated_SNPs_107389 0 0 1 0 0 exosome 0 0.438708571388916 0.995416641235352 0 hPsi_site_6349 iPseU_CNN:0.995416641235352;iRNA_PseU:0 6350 chr2 66775112 66775112 1 + C T UCEC 66775112 + 66775092 66775132 41 AGAACAGAAAAAGCAGTTGGCACAAGACACGGGACTCACCA AGAACAGAAAAAGCAGTTGGTACAAGACACGGGACTCACCA Direct Gain 0 0.946300449708579 0 1 prediction 0.892600899417159 Functional Gain - MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66775112 chr2:66775112 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107390 0 0 0 1 2 chromatin 0 0.438582437008092 1 0 hPsi_site_6350 iPseU_CNN:1;iRNA_PseU:0 6351 chr1 29189312 29189312 1 + G A SKCM 29189312 - 29189292 29189332 41 AGGAACACGCAGATCTTGGTCACCGTGTCCCAGTACCAGCT AGGAACACGCAGATCTTGGTTACCGTGTCCCAGTACCAGCT Direct Gain 0 0.946298497802147 0 0.999085903167725 prediction 0.892596995604295 Functional Gain - OPRD1 ENSG00000116329 CDS Human protein_coding chr1:29189312 chr1:29189312 synonymous SNV . 0 21 hPsi_associated_SNPs_107391 0 0 0 0 0 nucleoplasm 0 0.43866072980188 0.99817180633545 0 hPsi_site_6351 iPseU_CNN:0.99817180633545;iRNA_PseU:0 6352 chr20 51872968 51872968 1 + G A STAD 51872968 - 51872948 51872988 41 CTTACACTTGAATTTAGAGTCTGTGTCCTCTTCGGCAGCTA CTTACACTTGAATTTAGAGTTTGTGTCCTCTTCGGCAGCTA Direct Gain 0 0.946297960791751 0 0.997372090816498 prediction 0.892595921583502 Functional Gain - TSHZ2 ENSG00000182463 CDS Human protein_coding chr20:51872968 chr20:51872968 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107392 0 0 0 0 0 Cytoplasm 0 0.438716222972434 0.994744181632996 0 hPsi_site_6352 iPseU_CNN:0.994744181632996;iRNA_PseU:0 6353 chr22 39427875 39427875 1 + C T COAD 39427875 + 39427855 39427895 41 CACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTG CACAGCAACGTGAATCTCACTATCTTCACCGCCCGCCTCTG Direct Gain 0 0.946288237065781 0 0.998859167098999 prediction 0.892576474131561 Functional Gain - APOBEC3D ENSG00000243811 CDS Human protein_coding chr22:39427875 chr22:39427875 synonymous SNV . 0 21 hPsi_associated_SNPs_107393 0 0 0 0 0 Nucleus 0 0.438714903006287 0.997718334197998 0 hPsi_site_6353 iPseU_CNN:0.997718334197998;iRNA_PseU:0 6354 chr8 35647962 35647962 1 + C T UCEC 35647962 + 35647942 35647982 41 GTCATCAGCATGATGGTGATCTTGACTCCCTGGCCTGTGCC GTCATCAGCATGATGGTGATTTTGACTCCCTGGCCTGTGCC Direct Gain 0 0.946287343836773 0 0.999963760375977 prediction 0.892574687673545 Functional Gain - UNC5D ENSG00000156687 CDS Human protein_coding chr8:35647962 chr8:35647962 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_107394 0 0 0 0 1 chromatin 0 0.439636413268797 0.999927520751954 0 hPsi_site_6354 iPseU_CNN:0.999927520751954;iRNA_PseU:0 6355 chr17 40959840 40959840 1 + T A LUAD 40959840 - 40959820 40959860 41 TGGATGAAAGCACTTGCTGCAATGATTCCTACTGCCAACAG TGGATGAAAGCACTTGCTGCTATGATTCCTACTGCCAACAG Direct Gain 0 0.946280037744558 0 0.987744688987732 prediction 0.892560075489117 Functional Gain - CNTD1 ENSG00000176563 CDS Human protein_coding chr17:40959840 chr17:40959840 synonymous SNV . 0 21 hPsi_associated_SNPs_107395 0 0 0 0 0 Cytosol 0 0.438870099303747 0.975489377975464 0 hPsi_site_6355 iPseU_CNN:0.975489377975464;iRNA_PseU:0 6356 chr6 33053648 33053648 1 + C T UCEC 33053648 + 33053628 33053668 41 GTGGAGTGGGCATCTTCATGCACAGGAGGAGCAAGAAAGGT GTGGAGTGGGCATCTTCATGTACAGGAGGAGCAAGAAAGGT Direct Gain 0 0.946275338407027 0 0.988929152488708 prediction 0.892550676814053 Functional Gain - HLA-DPB1 ENSG00000223865 CDS Human protein_coding chr6:33053648 chr6:33053648 nonsynonymous SNV 0.025 0 21 hPsi_associated_SNPs_107396 0 0 0 0 2 exosome 0 0.43868966719174 0.977858304977416 0 hPsi_site_6356 iPseU_CNN:0.977858304977416;iRNA_PseU:0 6357 chr1 110032686 110032686 1 + C T LGG 110032686 + 110032666 110032706 41 AGAGAGTGAGGAGGAGGGGACATCTGACGACCTCCACCCAC AGAGAGTGAGGAGGAGGGGATATCTGACGACCTCCACCCAC Direct Gain 0 0.94627468389737 0 0.999452471733093 prediction 0.892549367794741 Functional Gain - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110032686 chr1:110032686 nonsynonymous SNV 0.999 0 21 hPsi_associated_SNPs_107397 0 0 0 0 1 nucleoplasm 0 0.438717015388013 0.998904943466186 0 hPsi_site_6357 iPseU_CNN:0.998904943466186;iRNA_PseU:0 6358 chr1 248551626 248551626 1 + C T LIHC 248551626 + 248551606 248551646 41 GGGAGGAAGAAGGCCTTTGCCACCTGCTCTTCACACATGAT GGGAGGAAGAAGGCCTTTGCTACCTGCTCTTCACACATGAT Direct Gain 0 0.946259504014566 0 0.724367380142212 prediction 0.892519008029132 Functional Gain - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551626 chr1:248551626 synonymous SNV . 0 21 hPsi_associated_SNPs_107398 0 0 0 0 0 unknown 0 0.438765036769103 0.448734760284424 0 hPsi_site_6358 iPseU_CNN:0.448734760284424;iRNA_PseU:0 6359 chr17 33592239 33592239 1 + C T ACC 33592239 + 33592219 33592259 41 GGAAAGCAAAGTTCATCACTCAGACAGCAAGGGATGGCCCA GGAAAGCAAAGTTCATCACTTAGACAGCAAGGGATGGCCCA Direct Gain 0 0.946254777242394 0 0.783391237258911 prediction 0.892509554484787 Functional Gain - SLFN5 ENSG00000166750 CDS Human protein_coding chr17:33592239 chr17:33592239 stopgain 0.047 0 21 hPsi_associated_SNPs_107399 0 0 0 0 0 nucleus 0 0.438712534444858 0.566782474517822 0 hPsi_site_6359 iPseU_CNN:0.566782474517822;iRNA_PseU:0 6360 chr5 138160429 138160429 1 + G A UCEC 138160429 - 138160409 138160449 41 TCCACCCTGGTGCTGTGAGGCATCGTCTGAGGCAGTGGCCT TCCACCCTGGTGCTGTGAGGTATCGTCTGAGGCAGTGGCCT Direct Gain 0 0.94625180156277 0 0.999978423118591 prediction 0.89250360312554 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138160429 chr5:138160429 nonsynonymous SNV 0.966 1 21 hPsi_associated_SNPs_107400 0 0 0 0 0 Nucleus 0 0.438720006009057 0.999956846237182 0 hPsi_site_6360 iPseU_CNN:0.999956846237182;iRNA_PseU:0 6361 chr15 57910309 57910309 1 + C T SKCM 57910309 + 57910289 57910329 41 GTGTGGTGCGAAGATCAGATCAAAATCAGCAGAAAGAAATG GTGTGGTGCGAAGATCAGATTAAAATCAGCAGAAAGAAATG Direct Gain 0 0.946251480563664 0 0.529944479465485 prediction 0.892502961127327 Functional Gain - GCOM1;MYZAP ENSG00000137878;ENSG00000263155 CDS Human other chr15:57910309 chr15:57910309 stopgain 0.998 0 21 hPsi_associated_SNPs_107401 0 0 1 1 2 unknown 0 0.438717955479433 0.0598889589309699 0 hPsi_site_6361 iPseU_CNN:0.0598889589309699;iRNA_PseU:0 6362 chr12 110471682 110471682 1 + A T COAD 110471682 + 110471662 110471702 41 ATGTTCAAGACAATGGCAGAAATGTGCATTTGCAAGATGAA ATGTTCAAGACAATGGCAGATATGTGCATTTGCAAGATGAA Direct Gain 0 0.94624843457322 0 0.390928149223328 prediction 0.892496869146441 Functional Gain - ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110471682 chr12:110471682 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107402 0 0 0 0 2 chromatin 0 0.403934805994409 0 0 hPsi_site_6362 iPseU_CNN:0;iRNA_PseU:0 6363 chrX 102841769 102841769 1 + G A COAD 102841769 - 102841749 102841789 41 TTTATCCTTTAACATTTCCTCATCTCCTGTTTTGCCCTTGT TTTATCCTTTAACATTTCCTTATCTCCTGTTTTGCCCTTGT Direct Gain 0 0.946245543309214 0 0.765687525272369 prediction 0.892491086618427 Functional Gain - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841769 chrX:102841769 nonsynonymous SNV 0.020 1 21 hPsi_associated_SNPs_107403 0 0 0 0 0 Ribosome 0 0.438778554449398 0.531375050544738 0 hPsi_site_6363 iPseU_CNN:0.531375050544738;iRNA_PseU:0 6364 chr11 35640484 35640484 1 + G A rs143163205 35640484 - 35640464 35640504 41 GCTGACACGTGCCACCTGGGCTCGCTCCGGGACTGCCGGGG GCTGACACGTGCCACCTGGGTTCGCTCCGGGACTGCCGGGG Direct Gain 0 0.946244255547278 0 0.999977707862854 prediction 0.892488511094556 Functional Gain - FJX1 ENSG00000179431 CDS Human protein_coding chr11:35640484 chr11:35640484 synonymous SNV . 0 21 hPsi_associated_SNPs_107404 0 0 0 0 0 Endoplasmic reticulum 0 0.438721417795688 0.999955415725708 0 hPsi_site_6364 iPseU_CNN:0.999955415725708;iRNA_PseU:0 6365 chr9 98775284 98775284 1 + G A UCEC 98775284 - 98775264 98775304 41 CTAAGACTCTCATCATTCTGCTCATTCAAGATGTCCCAGAA CTAAGACTCTCATCATTCTGTTCATTCAAGATGTCCCAGAA Direct Gain 0 0.946243901330801 0 0.999993801116943 prediction 0.892487802661603 Functional Gain - ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98775284 chr9:98775284 synonymous SNV . 0 21 hPsi_associated_SNPs_107405 0 0 0 0 0 Nucleus 0 0.438616343071909 0.999987602233886 0 hPsi_site_6365 iPseU_CNN:0.999987602233886;iRNA_PseU:0 6366 chr11 58384736 58384736 1 + G A UCEC 58384736 - 58384716 58384756 41 AAACTGGTAGAAGGAGTCTGCATCATGTTTCTTCATGTGCC AAACTGGTAGAAGGAGTCTGTATCATGTTTCTTCATGTGCC Direct Gain 0 0.946232515973835 0 0.940529108047485 prediction 0.892465031947671 Functional Gain - ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58384736 chr11:58384736 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107406 0 0 0 0 0 chromatin 0 0.438718500546394 0.88105821609497 0 hPsi_site_6366 iPseU_CNN:0.88105821609497;iRNA_PseU:0 6367 chr2 187523774 187523774 1 + G A STAD 187523774 - 187523754 187523794 41 AGTGAGTTTGTCTCTAAATTCAGATTCATCCTAGAAATGGA AGTGAGTTTGTCTCTAAATTTAGATTCATCCTAGAAATGGA Direct Gain 0 0.946227996526929 0 0.999192833900452 prediction 0.892455993053857 Functional Gain - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187523774 chr2:187523774 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107407 0 0 0 0 0 Endoplasmic reticulum 0 0.438718578053455 0.998385667800904 0 hPsi_site_6367 iPseU_CNN:0.998385667800904;iRNA_PseU:0 6368 chr1 236902805 236902805 1 + C T UCEC 236902805 + 236902785 236902825 41 ATCAGCAACCGTCCTGCCTTCATGCCCTCCGAGGGCAAGAT ATCAGCAACCGTCCTGCCTTTATGCCCTCCGAGGGCAAGAT Direct Gain 0 0.946225988398149 0 0.958340764045715 prediction 0.892451976796298 Functional Gain - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236902805 chr1:236902805 synonymous SNV . 0 21 hPsi_associated_SNPs_107408 0 0 0 0 1 chromatin 0 0.438718592993724 0.91668152809143 0 hPsi_site_6368 iPseU_CNN:0.91668152809143;iRNA_PseU:0 6369 chr4 169837113 169837113 1 + C T LUAD 169837113 + 169837093 169837133 41 AGGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCCTGGA AGGAGCGATTCTTCAGACCTTACTTCTTGCAGGCTCCTGGA Direct Gain 0 0.946214015847167 0 0.999994516372681 prediction 0.892428031694334 Functional Gain - PALLD ENSG00000129116 CDS Human protein_coding chr4:169837113 chr4:169837113 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107409 0 0 1 0 2 Cytosol 0 0.438717568349601 0.999989032745362 0 hPsi_site_6369 iPseU_CNN:0.999989032745362;iRNA_PseU:0 6370 chr17 9066214 9066214 1 + G A UCEC 9066214 - 9066194 9066234 41 TGTTGTGGCGACAGTTGAGGCAGACACCTCCGCTCTTGCGC TGTTGTGGCGACAGTTGAGGTAGACACCTCCGCTCTTGCGC Direct Gain 0 0.946212394458908 0 0.930664837360382 prediction 0.892424788917816 Functional Gain - NTN1 ENSG00000065320 CDS Human protein_coding chr17:9066214 chr17:9066214 nonsynonymous SNV 0.990 5 21 hPsi_associated_SNPs_107410 0 0 0 0 0 exosome 0 0.4387181893268 0.861329674720764 0 hPsi_site_6370 iPseU_CNN:0.861329674720764;iRNA_PseU:0 6371 chr9 125377554 125377554 1 + G T SKCM 125377554 + 125377534 125377574 41 GAATCCCCCACTTCTTCTGTGACCTCTACGCTCTGATGAAG GAATCCCCCACTTCTTCTGTTACCTCTACGCTCTGATGAAG Direct Gain 0 0.946212136482844 0 0.994147121906281 prediction 0.892424272965687 Functional Gain - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377554 chr9:125377554 nonsynonymous SNV 0.843 4 21 hPsi_associated_SNPs_107411 0 0 0 0 0 unknown 0 0.438765837760858 0.988294243812562 0 hPsi_site_6371 iPseU_CNN:0.988294243812562;iRNA_PseU:0 6372 chr2 18113616 18113616 1 + G T SKCM 18113616 + 18113596 18113636 41 AGGGATATATATGCACAGCGGATGCACACCTTCATTACCAG AGGGATATATATGCACAGCGTATGCACACCTTCATTACCAG Direct Gain 0 0.946211108435402 0 0.000297427177429199 prediction 0.892422216870804 Functional Gain - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18113616 chr2:18113616 synonymous SNV . 0 21 hPsi_associated_SNPs_107412 0 0 0 0 0 Cytosol 0 0.438815130877398 0 0 hPsi_site_6372 iPseU_CNN:0;iRNA_PseU:0 6373 chr3 183754577 183754577 1 + C T UCEC 183754577 + 183754557 183754597 41 CCAGGAGCTTTCAAATACATCACAGAACCTCATTCAGAACA CCAGGAGCTTTCAAATACATTACAGAACCTCATTCAGAACA Direct Gain 0 0.946191438609416 0 0.0041099488735199 prediction 0.892382877218832 Functional Gain - HTR3D ENSG00000186090 CDS Human protein_coding chr3:183754577 chr3:183754577 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_107413 0 0 0 0 1 unknown 0 0.438724698342144 0 0 hPsi_site_6373 iPseU_CNN:0;iRNA_PseU:0 6374 chr17 28992578 28992578 1 + C T rs186891073 28992578 + 28992558 28992598 41 TATCTGTGAGAATCTATTGTCATGTCTGTTTTCCTGTTCTT TATCTGTGAGAATCTATTGTTATGTCTGTTTTCCTGTTCTT Direct Gain 0 0.94618774952738 0 0.998043775558472 prediction 0.89237549905476 Functional Gain - LOC107133515;SUZ12P1 ENSG00000214719 ncRNA_intronic Human processed_transcript chr17:28992578 chr17:28992578 . . 0 21 hPsi_associated_SNPs_107414 0 0 0 0 0 unknown 0 0.438685908153253 0.996087551116944 0 hPsi_site_6374 iPseU_CNN:0.996087551116944;iRNA_PseU:0 6375 chr7 53103500 53103500 1 + C A LUAD 53103500 - 53103480 53103520 41 GGGACTCTGGCGACCCTGGGGAGATGGCGTGGTCTGGGGCG GGGACTCTGGCGACCCTGGGTAGATGGCGTGGTCTGGGGCG Direct Gain 0 0.946185398353625 0 0.94881546497345 prediction 0.89237079670725 Functional Gain - POM121L12 ENSG00000221900 CDS Human protein_coding chr7:53103500 chr7:53103500 nonsynonymous SNV 0.000 1 21 hPsi_associated_SNPs_107415 0 0 0 0 0 unknown 0 0.43872002673097 0.8976309299469 0 hPsi_site_6375 iPseU_CNN:0.8976309299469;iRNA_PseU:0 6376 chr7 101845340 101845340 1 + G A UCEC 101845340 - 101845320 101845360 41 GGGACCGAGGGCTTGGTGGGCTTGGACATGGGCACGATCGG GGGACCGAGGGCTTGGTGGGTTTGGACATGGGCACGATCGG Direct Gain 0 0.946184959506191 0 0.999998211860657 prediction 0.892369919012381 Functional Gain - CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845340 chr7:101845340 synonymous SNV . 0 21 hPsi_associated_SNPs_107416 0 0 0 0 0 Exosome 0 0.438720655161894 0.999996423721314 0 hPsi_site_6376 iPseU_CNN:0.999996423721314;iRNA_PseU:0 6377 chr7 808433 808433 1 + G A rs115860623 808433 - 808413 808453 41 ACAGCCAAATGTCCACAGGTCAAGTCCAACTCCTGGGATGG ACAGCCAAATGTCCACAGGTTAAGTCCAACTCCTGGGATGG Direct Gain 0 0.946184222494711 0 0.998485207557678 prediction 0.892368444989421 Functional Gain - DNAAF5 ENSG00000164818 UTR5 Human protein_coding chr7:808433 chr7:808433 . . 0 21 hPsi_associated_SNPs_107417 0 0 0 0 0 Ribosome 0 0.43876423238248 0.996970415115356 0 hPsi_site_6377 iPseU_CNN:0.996970415115356;iRNA_PseU:0 6378 chr6 47682613 47682613 1 + G A LUSC 47682613 - 47682593 47682633 41 AGCCAACAGGCCTCAGGTCTCATGTAGCCTTTCTCTGGCTC AGCCAACAGGCCTCAGGTCTTATGTAGCCTTTCTCTGGCTC Direct Gain 0 0.946181561810592 0 0.999493062496185 prediction 0.892363123621183 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47682613 chr6:47682613 nonsynonymous SNV 0.035 0 21 hPsi_associated_SNPs_107418 0 0 0 0 0 exosome 0 0.438729551666898 0.99898612499237 0 hPsi_site_6378 iPseU_CNN:0.99898612499237;iRNA_PseU:0 6379 chr16 1260910 1260910 1 + G A SKCM 1260910 - 1260890 1260930 41 AACACCCAGGATCTTGGCGCCACCAGCCGAGGCCATGGCCA AACACCCAGGATCTTGGCGCTACCAGCCGAGGCCATGGCCA Direct Gain 0 0.946181345945216 0 0.999964714050293 prediction 0.892362691890431 Functional Gain - CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1260910 chr16:1260910 nonsynonymous SNV 0.251 4 21 hPsi_associated_SNPs_107419 0 0 0 0 0 nucleolus 0 0.438658814061118 0.999929428100586 0 hPsi_site_6379 iPseU_CNN:0.999929428100586;iRNA_PseU:0 6380 chr5 140798393 140798393 1 + G A SKCM 140798393 - 140798373 140798413 41 TGTTGAGAGAGATCCTCGGTCTTTTGCTTCTATGTTTATCG TGTTGAGAGAGATCCTCGGTTTTTTGCTTCTATGTTTATCG Direct Gain 0 0.946180740956183 0 0.38011109828949 prediction 0.892361481912365 Functional Gain - PCDHGB7 ENSG00000254122 CDS Human protein_coding chr5:140798393 chr5:140798393 nonsynonymous SNV 0.991 3 21 hPsi_associated_SNPs_107420 0 0 0 0 0 exosome 0 0.438718642416275 0 0 hPsi_site_6380 iPseU_CNN:0;iRNA_PseU:0 6381 chr11 60609729 60609729 1 + G A rs541655197 60609729 - 60609709 60609749 41 ACACTCGGAGGAGACCCGGGCTCCCTCGTTTCTTCTGGGTT ACACTCGGAGGAGACCCGGGTTCCCTCGTTTCTTCTGGGTT Direct Gain 0 0.946176110484806 0 0.984825313091278 prediction 0.892352220969613 Functional Gain - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60609729 chr11:60609729 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107421 0 0 0 0 0 Ribosome 0 0.44464846947391 0.969650626182556 0 hPsi_site_6381 iPseU_CNN:0.969650626182556;iRNA_PseU:0 6382 chr16 70191000 70191000 1 + C T rs557096943 70191000 + 70190980 70191020 41 CCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCACCCCTC CCTAATATTCACTCTGGGCTTTTCTTCCCTTCCCACCCCTC Direct Gain 0 0.94617307258679 0 0.98361599445343 prediction 0.892346145173581 Functional Gain - LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70191000 chr16:70191000 . . 0 21 hPsi_associated_SNPs_107422 0 0 1 0 0 unknown 0 0.438718383829507 0.96723198890686 0 hPsi_site_6382 iPseU_CNN:0.96723198890686;iRNA_PseU:0 6383 chr11 113075036 113075036 1 + C A UCEC 113075036 - 113075016 113075056 41 CCATTGGGGGAGAACCAGGAGATGTCTTTATCTTTGGCATC CCATTGGGGGAGAACCAGGATATGTCTTTATCTTTGGCATC Direct Gain 0 0.946173027638129 0 0.953917980194092 prediction 0.892346055276259 Functional Gain - NCAM1 ENSG00000149294 CDS Human protein_coding chr11:113075036 chr11:113075036 synonymous SNV . 0 21 hPsi_associated_SNPs_107423 0 0 0 0 0 Ribosome 0 0.438718581229766 0.907835960388184 0 hPsi_site_6383 iPseU_CNN:0.907835960388184;iRNA_PseU:0 6384 chr15 34394951 34394951 1 + G A BLCA 34394951 - 34394931 34394971 41 ATAGCACGAGCTGACCATTTCATGGAGCGCCCTGAGTCACT ATAGCACGAGCTGACCATTTTATGGAGCGCCCTGAGTCACT Direct Gain 0 0.946168417516636 0 0.993376791477203 prediction 0.892336835033272 Functional Gain - PGBD4 ENSG00000182405 CDS Human protein_coding chr15:34394951 chr15:34394951 nonsynonymous SNV 0.368 0 21 hPsi_associated_SNPs_107424 0 0 0 0 0 exosome 0 0.438717380406889 0.986753582954406 0 hPsi_site_6384 iPseU_CNN:0.986753582954406;iRNA_PseU:0 6385 chr19 36357136 36357136 1 + C T CESC 36357136 + 36357116 36357156 41 GAAGCCCCTGGAGGAGGTCTCTTCCTGCCACCACCCTCCCC GAAGCCCCTGGAGGAGGTCTTTTCCTGCCACCACCCTCCCC Direct Gain 0 0.946165017655224 0 0.991978526115417 prediction 0.892330035310447 Functional Gain - KIRREL2 ENSG00000126259 CDS Human protein_coding chr19:36357136 chr19:36357136 synonymous SNV . 0 21 hPsi_associated_SNPs_107425 0 0 0 0 2 exosome 0 0.438718594159733 0.983957052230834 0 hPsi_site_6385 iPseU_CNN:0.983957052230834;iRNA_PseU:0 6386 chr7 128356889 128356889 1 + G T UCEC 128356889 + 128356869 128356909 41 CAAAAGGGGCAGGAATTGGAGAGACGTCTACAAAGCTTCCA CAAAAGGGGCAGGAATTGGATAGACGTCTACAAAGCTTCCA Direct Gain 0 0.946164412827579 0 0.999164521694183 prediction 0.892328825655158 Functional Gain - FAM71F1 ENSG00000135248 CDS Human protein_coding chr7:128356889 chr7:128356889 nonsynonymous SNV 0.817 0 21 hPsi_associated_SNPs_107426 0 0 0 1 1 exosome 0 0.438909699761442 0.998329043388366 0 hPsi_site_6386 iPseU_CNN:0.998329043388366;iRNA_PseU:0 6387 chr10 72297621 72297621 1 + T A SKCM 72297621 - 72297601 72297641 41 AAACAGGATCAGGTAGAAGTATCGCTCCAGGCTCCACAGCG AAACAGGATCAGGTAGAAGTTTCGCTCCAGGCTCCACAGCG Direct Gain 0 0.946162995675937 0 0.999590873718262 prediction 0.892325991351874 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72297621 chr10:72297621 nonsynonymous SNV 0.969 4 21 hPsi_associated_SNPs_107427 0 0 0 0 0 Ribosome 0 0.435045604525136 0.999181747436524 0 hPsi_site_6387 iPseU_CNN:0.999181747436524;iRNA_PseU:0 6388 chr3 174951960 174951960 1 + C T HNSC 174951960 + 174951940 174951980 41 CAGCCAAGACCTGCTCTATTCATATGCAGCCTATTCTGCCA CAGCCAAGACCTGCTCTATTTATATGCAGCCTATTCTGCCA Direct Gain 0 0.946156851510913 0 0.999969899654388 prediction 0.892313703021826 Functional Gain - NAALADL2 ENSG00000177694 CDS Human protein_coding chr3:174951960 chr3:174951960 nonsynonymous SNV 0.698 1 21 hPsi_associated_SNPs_107428 0 0 0 0 1 exosome 0 0.437786590067164 0.999939799308776 0 hPsi_site_6388 iPseU_CNN:0.999939799308776;iRNA_PseU:0 6389 chr12 69047924 69047924 1 + G A LUAD 69047924 - 69047904 69047944 41 GCAAATCCTTGTCCATTTTTCATGTATAAATCCCTCATTGC GCAAATCCTTGTCCATTTTTTATGTATAAATCCCTCATTGC Direct Gain 0 0.946155028328791 0 0.835708022117615 prediction 0.892310056657582 Functional Gain - RAP1B ENSG00000127314 CDS Human protein_coding chr12:69047924 chr12:69047924 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107429 0 0 0 0 0 Ribosome 0 0.438718592689157 0.67141604423523 0 hPsi_site_6389 iPseU_CNN:0.67141604423523;iRNA_PseU:0 6390 chr15 43821274 43821274 1 + G A BLCA 43821274 - 43821254 43821294 41 AGGTAGGAAGTCTCCATCTTCATCTGAGTCGAGGGCTGCCT AGGTAGGAAGTCTCCATCTTTATCTGAGTCGAGGGCTGCCT Direct Gain 0 0.946153823665858 0 0.999183654785156 prediction 0.892307647331717 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43821274 chr15:43821274 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107430 0 0 0 0 0 nucleolus 0 0.438718567420745 0.998367309570312 0 hPsi_site_6390 iPseU_CNN:0.998367309570312;iRNA_PseU:0 6391 chr15 44671957 44671957 1 + G T LIHC 44671957 + 44671937 44671977 41 AATCTCCCATCTTCCAACTGGACAACCTCTCTCCCCAAATA AATCTCCCATCTTCCAACTGTACAACCTCTCTCCCCAAATA Direct Gain 0 0.946149947509055 0 0.979190587997437 prediction 0.892299895018109 Functional Gain - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44671957 chr15:44671957 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_107431 0 0 1 0 2 Ribosome 0 0.438782328008548 0.958381175994874 0 hPsi_site_6391 iPseU_CNN:0.958381175994874;iRNA_PseU:0 6392 chr19 58966576 58966576 1 + G T UCEC 58966576 + 58966556 58966596 41 GGAGTTTGACAGAGGATAGAGATGTTTCTGGAGAATGGCCA GGAGTTTGACAGAGGATAGATATGTTTCTGGAGAATGGCCA Direct Gain 0 0.946145768251624 0 0.948754191398621 prediction 0.892291536503247 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58966576 chr19:58966576 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_107432 0 0 0 0 1 exosome 0 0.438715679913464 0.897508382797242 0 hPsi_site_6392 iPseU_CNN:0.897508382797242;iRNA_PseU:0 6393 chr1 248153578 248153578 1 + T A rs72475091 248153578 - 248153558 248153598 41 AGCAGTTGATGTTTGATTGTAATTTTCCATGGAGCATTCAT AGCAGTTGATGTTTGATTGTTATTTTCCATGGAGCATTCAT Direct Gain 0 0.946142581045006 0 0.999242663383484 prediction 0.892285162090011 Functional Gain - OR2L1P ENSG00000224227 ncRNA_exonic Human unprocessed_pseudogene chr1:248153578 chr1:248153578 . . 0 21 hPsi_associated_SNPs_107433 0 0 0 0 0 unknown 0 0.437602059448874 0.998485326766968 0 hPsi_site_6393 iPseU_CNN:0.998485326766968;iRNA_PseU:0 6394 chr1 248308467 248308467 1 + G A SKCM 248308467 - 248308447 248308487 41 ATGAAGTCAGAGTTGAAGGTCTGATTCTCCCATGCCATGAT ATGAAGTCAGAGTTGAAGGTTTGATTCTCCCATGCCATGAT Direct Gain 0 0.946137036061721 0 0.999273717403412 prediction 0.892274072123442 Functional Gain - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248308467 chr1:248308467 synonymous SNV . 0 21 hPsi_associated_SNPs_107434 0 0 0 0 0 unknown 0 0.438638775975936 0.998547434806824 0 hPsi_site_6394 iPseU_CNN:0.998547434806824;iRNA_PseU:0 6395 chr16 11000801 11000801 1 + C T BLCA 11000801 + 11000781 11000821 41 GTGGCGGCCGATGAGGTTTTCAGCCACATCTTGAAGAGACC GTGGCGGCCGATGAGGTTTTTAGCCACATCTTGAAGAGACC Direct Gain 0 0.946136797649156 0 0.0170097351074219 prediction 0.892273595298312 Functional Gain - CIITA ENSG00000179583 CDS Human protein_coding chr16:11000801 chr16:11000801 synonymous SNV . 0 21 hPsi_associated_SNPs_107435 0 0 0 0 0 Nucleus 0 0.438718781326763 0 0 hPsi_site_6395 iPseU_CNN:0;iRNA_PseU:0 6396 chr11 55595333 55595333 1 + C T SKCM 55595333 + 55595313 55595353 41 GAGAGTGTTACCATCATGATCATCCTCACCTCCTACCTGCT GAGAGTGTTACCATCATGATTATCCTCACCTCCTACCTGCT Direct Gain 0 0.946135636490052 0 0.993136167526245 prediction 0.892271272980103 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595333 chr11:55595333 synonymous SNV . 0 21 hPsi_associated_SNPs_107436 0 0 0 0 0 unknown 0 0.438718267317162 0.98627233505249 0 hPsi_site_6396 iPseU_CNN:0.98627233505249;iRNA_PseU:0 6397 chr3 12533660 12533660 1 + C T BLCA 12533660 + 12533640 12533680 41 TTTTGGAAAAGGTATTCTTTCAAGAAGCCGTCCAAGCTTCA TTTTGGAAAAGGTATTCTTTTAAGAAGCCGTCCAAGCTTCA Direct Gain 0 0.946134051110489 0 0.947551727294922 prediction 0.892268102220978 Functional Gain - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12533660 chr3:12533660 nonsynonymous SNV 0.991 4 21 hPsi_associated_SNPs_107437 0 0 1 0 1 Nucleus 0 0.438718592636391 0.895103454589844 0 hPsi_site_6397 iPseU_CNN:0.895103454589844;iRNA_PseU:0 6398 chrX 135482149 135482149 1 + C T SKCM 135482149 + 135482129 135482169 41 TCACAGCTGCAGTGGCACTTCATTACTTCCTGCTTGTTTCT TCACAGCTGCAGTGGCACTTTATTACTTCCTGCTTGTTTCT Direct Gain 0 0.946131116785367 0 0.999114751815796 prediction 0.892262233570733 Functional Gain - ADGRG4 ENSG00000156920 CDS Human protein_coding chrX:135482149 chrX:135482149 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_107438 0 0 0 0 0 exosome 0 0.438672822654111 0.998229503631592 0 hPsi_site_6398 iPseU_CNN:0.998229503631592;iRNA_PseU:0 6399 chr17 26684816 26684816 1 + G A COAD 26684816 - 26684796 26684836 41 GAGCTATCACCGCCCTTGTGCTTCTTCCCCAGCGCGGCCTC GAGCTATCACCGCCCTTGTGTTTCTTCCCCAGCGCGGCCTC Direct Gain 0 0.946130803896798 0 0.923685431480408 prediction 0.892261607793596 Functional Gain - TMEM199 ENSG00000244045 CDS Human protein_coding chr17:26684816 chr17:26684816 synonymous SNV . 0 21 hPsi_associated_SNPs_107439 0 0 0 0 0 Ribosome 0 0.438687112534098 0.847370862960816 0 hPsi_site_6399 iPseU_CNN:0.847370862960816;iRNA_PseU:0 6400 chr1 228559483 228559483 1 + C T LUSC 228559483 + 228559463 228559503 41 TCAGGGACATGGGGCACCCTCAGGGCTCCAAGCAGCTTCCA TCAGGGACATGGGGCACCCTTAGGGCTCCAAGCAGCTTCCA Direct Gain 0 0.946130585616935 0 0.999953389167786 prediction 0.892261171233869 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228559483 chr1:228559483 stopgain 0.017 0 21 hPsi_associated_SNPs_107440 0 0 1 0 0 Ribosome 0 0.438718592993033 0.999906778335572 0 hPsi_site_6400 iPseU_CNN:0.999906778335572;iRNA_PseU:0 6401 chr17 73753635 73753635 1 + G A BLCA 73753635 - 73753615 73753655 41 GGGGTGGGGCAGGGTGCGGTCAAGTTTGGAAGAACTGTTGG GGGGTGGGGCAGGGTGCGGTTAAGTTTGGAAGAACTGTTGG Direct Gain 0 0.946127469996243 0 0.993154168128967 prediction 0.892254939992486 Functional Gain - ITGB4 ENSG00000132470 CDS Human protein_coding chr17:73753635 chr17:73753635 synonymous SNV . 0 21 hPsi_associated_SNPs_107441 0 0 0 0 0 Cytosol 0 0.438718592643123 0.986308336257934 0 hPsi_site_6401 iPseU_CNN:0.986308336257934;iRNA_PseU:0 6402 chr2 155252535 155252535 1 + G A rs114048422 155252535 - 155252515 155252555 41 TTCTCTTAGTGTTTTTCTGACTGACACATCTCCATAATCCA TTCTCTTAGTGTTTTTCTGATTGACACATCTCCATAATCCA Direct Gain 0 0.946126277381512 0 0.00944378972053528 prediction 0.892252554763025 Functional Gain - GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155252535 chr2:155252535 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107442 0 0 0 0 0 Nucleus 0 0.438764711952199 0 0 hPsi_site_6402 iPseU_CNN:0;iRNA_PseU:0 6403 chr12 1940231 1940231 1 + G A BLCA 1940231 - 1940211 1940251 41 AGGGTTCGGGTGGCTGCGGGCACGTCTGGGGGCACCGTGGT AGGGTTCGGGTGGCTGCGGGTACGTCTGGGGGCACCGTGGT Direct Gain 0 0.946126093113011 0 0.984875321388245 prediction 0.892252186226022 Functional Gain - LRTM2 ENSG00000166159 CDS Human protein_coding chr12:1940231 chr12:1940231 synonymous SNV . 0 21 hPsi_associated_SNPs_107443 0 0 0 0 0 exosome 0 0.438718888087752 0.96975064277649 0 hPsi_site_6403 iPseU_CNN:0.96975064277649;iRNA_PseU:0 6404 chr20 25207207 25207207 1 + G T UCEC 25207207 + 25207187 25207227 41 CTGACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCG CTGACCCCACCTCCTCCATGTACAGTGTGAGCCCCGGGCCG Direct Gain 0 0.946120976728524 0 0.999970555305481 prediction 0.892241953457048 Functional Gain - ENTPD6 ENSG00000268302 CDS Human other chr20:25207207 chr20:25207207 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107444 0 0 1 0 0 Endoplasmic reticulum 0 0.438718484408087 0.999941110610962 0 hPsi_site_6404 iPseU_CNN:0.999941110610962;iRNA_PseU:0 6405 chr12 124403315 124403315 1 + C A LUAD 124403315 - 124403295 124403335 41 TCAGACAGGACGAAGAACAGGATGGCCCCCCTCCTGGCTGC TCAGACAGGACGAAGAACAGTATGGCCCCCCTCCTGGCTGC Direct Gain 0 0.946116466825502 0 0.529151260852814 prediction 0.892232933651004 Functional Gain - DNAH10 ENSG00000197653 CDS Human protein_coding chr12:124403315 chr12:124403315 synonymous SNV . 0 21 hPsi_associated_SNPs_107445 0 0 0 0 0 cytosol 0 0.438721076797038 0.0583025217056281 0 hPsi_site_6405 iPseU_CNN:0.0583025217056281;iRNA_PseU:0 6406 chr22 42141937 42141937 1 + C T rs554129745 42141937 + 42141917 42141957 41 TCAGCCCAGGAGAATCCATTCACAGCTCCCAGCGCCAAGAA TCAGCCCAGGAGAATCCATTTACAGCTCCCAGCGCCAAGAA Direct Gain 0 0.9461147787199 0 0.999988555908203 prediction 0.892229557439799 Functional Gain - MEI1 ENSG00000167077 CDS Human protein_coding chr22:42141937 chr22:42141937 synonymous SNV . 0 21 hPsi_associated_SNPs_107446 0 0 0 0 2 exosome 0 0.438718988460132 0.999977111816406 0 hPsi_site_6406 iPseU_CNN:0.999977111816406;iRNA_PseU:0 6407 chrX 148798384 148798384 1 + C T SKCM 148798384 + 148798364 148798404 41 CAATGGGAGGGATCCCACTTCTTACCCATCCCTGTATGAAG CAATGGGAGGGATCCCACTTTTTACCCATCCCTGTATGAAG Direct Gain 0 0.946114316161132 0 0.477696865797043 prediction 0.892228632322265 Functional Gain - MAGEA11 ENSG00000185247 CDS Human protein_coding chrX:148798384 chrX:148798384 nonsynonymous SNV 0.001 0 21 hPsi_associated_SNPs_107447 0 0 0 0 0 exosome 0 0.438718593000702 0 0 hPsi_site_6407 iPseU_CNN:0;iRNA_PseU:0 6408 chr11 60702789 60702789 1 + C T UCEC 60702789 + 60702769 60702809 41 GCTGTGACGGACGACAAGGTCTCAGTGCTGGAGCTGAGGGT GCTGTGACGGACGACAAGGTTTCAGTGCTGGAGCTGAGGGT Direct Gain 0 0.946112103897275 0 0.105857342481613 prediction 0.89222420779455 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60702789 chr11:60702789 synonymous SNV . 0 21 hPsi_associated_SNPs_107448 0 0 1 0 1 Ribosome 0 0.438760039342278 0 0 hPsi_site_6408 iPseU_CNN:0;iRNA_PseU:0 6409 chrX 64958961 64958961 1 + G A CHOL 64958961 - 64958941 64958981 41 AGCATCAGCCCGTAGGTCAGCACTAGCCTCTGCCCCATTCT AGCATCAGCCCGTAGGTCAGTACTAGCCTCTGCCCCATTCT Direct Gain 0 0.946111197077923 0 0.999999463558197 prediction 0.892222394155845 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64958961 chrX:64958961 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_107449 0 0 0 0 0 Ribosome 0 0.438718591648098 0.999998927116394 0 hPsi_site_6409 iPseU_CNN:0.999998927116394;iRNA_PseU:0 6410 chr22 49293304 49293304 1 + C T rs73889887 49293304 + 49293284 49293324 41 TGTCACCGTGTATAACAAGTCTCACTGACTCCTTCTCCGGA TGTCACCGTGTATAACAAGTTTCACTGACTCCTTCTCCGGA Direct Gain 0 0.946109569788667 0 0.999455690383911 prediction 0.892219139577334 Functional Gain - LINC01310 ENSG00000205632 ncRNA_exonic Human lincRNA chr22:49293304 chr22:49293304 . . 0 21 hPsi_associated_SNPs_107450 0 0 0 0 0 unknown 0 0.435919373381925 0.998911380767822 0 hPsi_site_6410 iPseU_CNN:0.998911380767822;iRNA_PseU:0 6411 chr19 1978449 1978449 1 + C T BLCA 1978449 + 1978429 1978469 41 TTGTGCCCCCAGGAGCCGATCAAGTCCCGGGCCCCGCAGCT TTGTGCCCCCAGGAGCCGATTAAGTCCCGGGCCCCGCAGCT Direct Gain 0 0.946103024659094 0 0.667834341526031 prediction 0.892206049318188 Functional Gain - CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1978449 chr19:1978449 synonymous SNV . 0 21 hPsi_associated_SNPs_107451 0 0 1 0 2 Ribosome 0 0.438718598646127 0.335668683052062 0 hPsi_site_6411 iPseU_CNN:0.335668683052062;iRNA_PseU:0 6412 chr2 108507752 108507752 1 + G A rs566469645 108507752 - 108507732 108507772 41 ATTATTTTTAGAGACAAGGTCTCGCTCTGTTCCCCGAGCTG ATTATTTTTAGAGACAAGGTTTCGCTCTGTTCCCCGAGCTG Direct Gain 0 0.94610249456546 0 0.999979257583618 prediction 0.89220498913092 Functional Gain - RGPD4 ENSG00000196862 downstream Human protein_coding chr2:108507752 chr2:108507752 . . 0 21 hPsi_associated_SNPs_107452 0 0 0 0 0 membrane 0 0.438718291226605 0.999958515167236 0 hPsi_site_6412 iPseU_CNN:0.999958515167236;iRNA_PseU:0 6413 chrX 118123528 118123528 1 + C T LUAD 118123528 + 118123508 118123548 41 GAAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGCAAGA GAAGTGGGATGCTACCTCTCTAAAAGCTGCTTCCAGCAAGA Direct Gain 0 0.946097382196027 0 0.00597423315048218 prediction 0.892194764392054 Functional Gain - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118123528 chrX:118123528 nonsynonymous SNV 0.283 0 21 hPsi_associated_SNPs_107453 0 0 1 0 0 chromatin 0 0.438717880760136 0 0 hPsi_site_6413 iPseU_CNN:0;iRNA_PseU:0 6414 chr9 130854231 130854231 1 + G A rs115942384 130854231 - 130854211 130854251 41 GGCTGGGGTGCCTCTGACTTCACGATCGTCCCCCTCTCTGG GGCTGGGGTGCCTCTGACTTTACGATCGTCCCCCTCTCTGG Direct Gain 0 0.946092969580232 0 0.997831106185913 prediction 0.892185939160463 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130854231 chr9:130854231 nonsynonymous SNV 0.622 0 21 hPsi_associated_SNPs_107454 0 0 0 0 0 Ribosome 0 0.438721467983651 0.995662212371826 0 hPsi_site_6414 iPseU_CNN:0.995662212371826;iRNA_PseU:0 6415 chr7 94855369 94855369 1 + G A CESC 94855369 - 94855349 94855389 41 TGATGGGGAAAACATGTCCTCATTCTCAGGCAGCTCAAAGA TGATGGGGAAAACATGTCCTTATTCTCAGGCAGCTCAAAGA Direct Gain 0 0.946092532383832 0 0.954045534133911 prediction 0.892185064767664 Functional Gain - PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94855369 chr7:94855369 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_107455 0 0 0 0 0 Nucleus 0 0.438718590574193 0.908091068267822 0 hPsi_site_6415 iPseU_CNN:0.908091068267822;iRNA_PseU:0 6416 chr15 78757626 78757626 1 + G A BRCA 78757626 - 78757606 78757646 41 AGAGTTTTCACTGCCTCCCTCATAGCAGCAAAATCCACCAT AGAGTTTTCACTGCCTCCCTTATAGCAGCAAAATCCACCAT Direct Gain 0 0.946088511532688 0 0.00236862897872925 prediction 0.892177023065377 Functional Gain - IREB2 ENSG00000136381 CDS Human protein_coding chr15:78757626 chr15:78757626 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107456 0 0 0 0 0 Cytosol 0 0.438718554733132 0 0 hPsi_site_6416 iPseU_CNN:0;iRNA_PseU:0 6417 chr5 76129296 76129296 1 + C T COAD 76129296 + 76129276 76129316 41 AGGAAGAGGGCCATCAAACTCATTGTCACTGTCCTGGCCAT AGGAAGAGGGCCATCAAACTTATTGTCACTGTCCTGGCCAT Direct Gain 0 0.946083939477091 0 0.189703613519669 prediction 0.892167878954182 Functional Gain - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76129296 chr5:76129296 synonymous SNV . 0 21 hPsi_associated_SNPs_107457 0 0 0 0 0 Ribosome 0 0.438718664066497 0 0 hPsi_site_6417 iPseU_CNN:0;iRNA_PseU:0 6418 chr18 66420858 66420858 1 + G A rs34595206 66420858 - 66420838 66420878 41 AGTTCGAGGCTGCCATGAGCCATGATCATACCACTGCACTC AGTTCGAGGCTGCCATGAGCTATGATCATACCACTGCACTC Direct Gain 0 0.946078973355695 0 0.991832375526428 prediction 0.89215794671139 Functional Gain - CCDC102B ENSG00000263637 ncRNA_intronic Human antisense chr18:66420858 chr18:66420858 . . 0 21 hPsi_associated_SNPs_107458 0 0 0 0 0 exosome 0 0.438808144706521 0.983664751052856 0 hPsi_site_6418 iPseU_CNN:0.983664751052856;iRNA_PseU:0 6419 chr8 125047589 125047589 1 + C A OV 125047589 - 125047569 125047609 41 AAAATGGCACTGGCATGCTTGATGGAGCCCAGCCACAGGTA AAAATGGCACTGGCATGCTTTATGGAGCCCAGCCACAGGTA Direct Gain 0 0.946078532792007 0 0.562749028205872 prediction 0.892157065584013 Functional Gain - FER1L6 ENSG00000214814 CDS Human protein_coding chr8:125047589 chr8:125047589 synonymous SNV . 0 21 hPsi_associated_SNPs_107459 0 0 0 0 0 exosome 0 0.438885162339339 0.125498056411744 0 hPsi_site_6419 iPseU_CNN:0.125498056411744;iRNA_PseU:0 6420 chr16 2812136 2812136 1 + C T BLCA 2812136 + 2812116 2812156 41 GCGACGTGGCCGCTCTAGGTCTCCTCAGCGACCAGGCTGGT GCGACGTGGCCGCTCTAGGTTTCCTCAGCGACCAGGCTGGT Direct Gain 0 0.946064618477935 0 0.529920160770416 prediction 0.892129236955869 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812136 chr16:2812136 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107460 0 0 1 0 0 Nucleus 0 0.438285895939562 0.0598403215408321 0 hPsi_site_6420 iPseU_CNN:0.0598403215408321;iRNA_PseU:0 6421 chr15 85383471 85383471 1 + G A LUSC 85383471 - 85383451 85383491 41 CAGGCCTTGCTTGGATTCCTCATCTTTCTTTTTCTTCTTGG CAGGCCTTGCTTGGATTCCTTATCTTTCTTTTTCTTCTTGG Direct Gain 0 0.94606450518569 0 0.362768292427063 prediction 0.892129010371379 Functional Gain - ALPK3 ENSG00000136383 CDS Human protein_coding chr15:85383471 chr15:85383471 nonsynonymous SNV 0.993 1 21 hPsi_associated_SNPs_107461 0 0 0 0 0 exosome 0 0.438718592952516 0 0 hPsi_site_6421 iPseU_CNN:0;iRNA_PseU:0 6422 chr2 219301314 219301314 1 + G A SKCM 219301314 - 219301294 219301334 41 TAGTAGGAACACATCATCCTCTTCCAAGTCATCCTGATTGA TAGTAGGAACACATCATCCTTTTCCAAGTCATCCTGATTGA Direct Gain 0 0.946056195873901 0 0.999945759773254 prediction 0.892112391747803 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219301314 chr2:219301314 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107462 0 0 0 0 0 Nucleus 0 0.438715125235961 0.999891519546508 0 hPsi_site_6422 iPseU_CNN:0.999891519546508;iRNA_PseU:0 6423 chr14 92909064 92909064 1 + C T COAD 92909064 + 92909044 92909084 41 GTTTCCTTTCCAGGGGTGTTCATCACCCATGGGGACGTCGG GTTTCCTTTCCAGGGGTGTTTATCACCCATGGGGACGTCGG Direct Gain 0 0.946054440742867 0 0.000414758920669556 prediction 0.892108881485735 Functional Gain - SLC24A4 ENSG00000140090 CDS Human protein_coding chr14:92909064 chr14:92909064 synonymous SNV . 0 21 hPsi_associated_SNPs_107463 0 0 0 0 2 exosome 0 0.438719346719111 0 0 hPsi_site_6423 iPseU_CNN:0;iRNA_PseU:0 6424 chr1 171080091 171080091 1 + G A SKCM 171080091 - 171080071 171080111 41 TCATGCTTGAATCTTGCATTCATCTGCTTCACGTACAACCA TCATGCTTGAATCTTGCATTTATCTGCTTCACGTACAACCA Direct Gain 0 0.946050079219404 0 0.997379720211029 prediction 0.892100158438809 Functional Gain - FMO3 ENSG00000007933 CDS Human protein_coding chr1:171080091 chr1:171080091 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_107464 0 0 0 0 0 exosome 0 0.438452052405635 0.994759440422058 0 hPsi_site_6424 iPseU_CNN:0.994759440422058;iRNA_PseU:0 6425 chr19 15905068 15905068 1 + G T UCEC 15905068 + 15905048 15905088 41 TGTGCCCTCTCCATCACCGAGATCCTCTACACCGTGGCCAT TGTGCCCTCTCCATCACCGATATCCTCTACACCGTGGCCAT Direct Gain 0 0.946047120272258 0 0.995317995548248 prediction 0.892094240544516 Functional Gain - OR10H5 ENSG00000172519 CDS Human protein_coding chr19:15905068 chr19:15905068 nonsynonymous SNV 0.035 4 21 hPsi_associated_SNPs_107465 0 0 0 0 0 unknown 0 0.438718592956094 0.990635991096496 0 hPsi_site_6425 iPseU_CNN:0.990635991096496;iRNA_PseU:0 6426 chr15 34131017 34131017 1 + C T UCEC 34131017 + 34130997 34131037 41 GGGAGATACAGATATCATGTCAGACCTCTTTGGACTCCACC GGGAGATACAGATATCATGTTAGACCTCTTTGGACTCCACC Direct Gain 0 0.94604434872681 0 0.0477250814437866 prediction 0.892088697453619 Functional Gain - RYR3 ENSG00000198838 CDS Human protein_coding chr15:34131017 chr15:34131017 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_107466 0 0 0 0 0 exosome 0 0.43871861379689 0 0 hPsi_site_6426 iPseU_CNN:0;iRNA_PseU:0 6427 chr9 35846974 35846974 1 + C T BLCA 35846974 + 35846954 35846994 41 GAAGCTGCAGTCTACACCTTCACCATGTTCTTCTCCACGGT GAAGCTGCAGTCTACACCTTTACCATGTTCTTCTCCACGGT Direct Gain 0 0.946040936566881 0 0.314473569393158 prediction 0.892081873133763 Functional Gain - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35846974 chr9:35846974 synonymous SNV . 0 21 hPsi_associated_SNPs_107467 0 0 0 0 1 cytosol 0 0.438718129144204 0 0 hPsi_site_6427 iPseU_CNN:0;iRNA_PseU:0 6428 chr22 41325805 41325805 1 + C T rs12168248 41325805 + 41325785 41325825 41 ATAAGCTGTGTGTGATCTTACTCATTCTCAGCCATGCCGCA ATAAGCTGTGTGTGATCTTATTCATTCTCAGCCATGCCGCA Direct Gain 0 0.94603692113593 0 0.994167685508728 prediction 0.892073842271859 Functional Gain - XPNPEP3 ENSG00000196236 UTR3 Human protein_coding chr22:41325805 chr22:41325805 . . 0 21 hPsi_associated_SNPs_107468 1 0 1 0 0 Ribosome 0 0.438394649565161 0.988335371017456 0 hPsi_site_6428 iPseU_CNN:0.988335371017456;iRNA_PseU:0 6429 chr16 16150321 16150321 1 + C T rs540495192 16150321 + 16150301 16150341 41 ATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACAT ATCACCTGAGGTCAGGAGTTTAAGACCAGCCTGGCCAACAT Direct Gain 0 0.94603626128138 0 0.972262740135193 prediction 0.89207252256276 Functional Gain - ABCC1 ENSG00000103222 intronic Human protein_coding chr16:16150321 chr16:16150321 . . 0 21 hPsi_associated_SNPs_107469 0 0 0 0 0 Mitochondrion 0 0.438718746121734 0.944525480270386 0 hPsi_site_6429 iPseU_CNN:0.944525480270386;iRNA_PseU:0 6430 chr20 51872223 51872223 1 + G A STAD 51872223 - 51872203 51872243 41 GACCTTGTGGAGGCAGGACTCAAGACCGGCTTGTCCATGAC GACCTTGTGGAGGCAGGACTTAAGACCGGCTTGTCCATGAC Direct Gain 0 0.946026516708854 0 0.2852463722229 prediction 0.892053033417709 Functional Gain - TSHZ2 ENSG00000182463 CDS Human protein_coding chr20:51872223 chr20:51872223 synonymous SNV . 0 21 hPsi_associated_SNPs_107470 0 0 0 0 0 Cytoplasm 0 0.438718591505889 0 0 hPsi_site_6430 iPseU_CNN:0;iRNA_PseU:0 6431 chr1 39800781 39800781 1 + G T BLCA 39800781 + 39800761 39800801 41 AGCAGGCAAAAAAGAGCAGGGAAATTTCCTTAAAGGAATTT AGCAGGCAAAAAAGAGCAGGTAAATTTCCTTAAAGGAATTT Direct Gain 0 0.94602516974203 0 0.897970199584961 prediction 0.89205033948406 Functional Gain - MACF1 ENSG00000127603 CDS Human protein_coding chr1:39800781 chr1:39800781 stopgain 0.110 0 21 hPsi_associated_SNPs_107471 0 0 1 0 0 Endoplasmic reticulum 0 0.438718587705764 0.795940399169922 0 hPsi_site_6431 iPseU_CNN:0.795940399169922;iRNA_PseU:0 6432 chr1 227842170 227842170 1 + G A BLCA 227842170 - 227842150 227842190 41 TTCTGCCCCTTACCTTCATTCACAGTTCTCCAGTCTTTCAC TTCTGCCCCTTACCTTCATTTACAGTTCTCCAGTCTTTCAC Direct Gain 0 0.946024668481608 0 0.668945670127869 prediction 0.892049336963216 Functional Gain - ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842170 chr1:227842170 synonymous SNV . 0 21 hPsi_associated_SNPs_107472 0 0 0 0 0 chromatin 0 0.438718592999779 0.337891340255738 0 hPsi_site_6432 iPseU_CNN:0.337891340255738;iRNA_PseU:0 6433 chr5 140530376 140530376 1 + C T UCEC 140530376 + 140530356 140530396 41 CCAACCCTCACTTCCACGTTCTCACCCGCAATCGCAGCGAA CCAACCCTCACTTCCACGTTTTCACCCGCAATCGCAGCGAA Direct Gain 0 0.946024456420258 0 0.999693036079407 prediction 0.892048912840516 Functional Gain - PCDHB6 ENSG00000113211 CDS Human protein_coding chr5:140530376 chr5:140530376 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_107473 0 0 0 0 0 exosome 0 0.438718590081765 0.999386072158814 0 hPsi_site_6433 iPseU_CNN:0.999386072158814;iRNA_PseU:0 6434 chr1 2938376 2938376 1 + G A CESC 2938376 - 2938356 2938396 41 GCTGAGGGAGCCTGGAATTTCAGGTGCCCCACGATGGAGCT GCTGAGGGAGCCTGGAATTTTAGGTGCCCCACGATGGAGCT Direct Gain 0 0.946024349402888 0 0.993013143539429 prediction 0.892048698805776 Functional Gain - ACTRT2 ENSG00000169717 CDS Human protein_coding chr1:2938376 chr1:2938376 synonymous SNV . 0 21 hPsi_associated_SNPs_107474 0 0 0 0 0 unknown 0 0.438718593212299 0.986026287078858 0 hPsi_site_6434 iPseU_CNN:0.986026287078858;iRNA_PseU:0 6435 chr5 140741247 140741247 1 + C A LUAD 140741247 - 140741227 140741267 41 TGATCGAAGGCGCGCTGCGCGAACACCACCCCGCTCTGCGC TGATCGAAGGCGCGCTGCGCTAACACCACCCCGCTCTGCGC Direct Gain 0 0.946016642872556 0 0.999868631362915 prediction 0.892033285745111 Functional Gain - PCDHGB2 ENSG00000253910 CDS Human protein_coding chr5:140741247 chr5:140741247 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_107475 0 0 0 0 0 exosome 0 0.438718458474965 0.99973726272583 0 hPsi_site_6435 iPseU_CNN:0.99973726272583;iRNA_PseU:0 6436 chr16 24268214 24268214 1 + G T LUAD 24268214 + 24268194 24268234 41 GCAGGACTAAATCTACAAGTGATAATGAAACCAGCAGGAAG GCAGGACTAAATCTACAAGTTATAATGAAACCAGCAGGAAG Direct Gain 0 0.946013874903633 0 0.998415946960449 prediction 0.892027749807266 Functional Gain - CACNG3 ENSG00000006116 CDS Human protein_coding chr16:24268214 chr16:24268214 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107476 0 0 0 0 1 nucleus 0 0.438700984729911 0.996831893920898 0 hPsi_site_6436 iPseU_CNN:0.996831893920898;iRNA_PseU:0 6437 chr7 123509056 123509056 1 + G A LUSC 123509056 - 123509036 123509076 41 CAAGAGAGCTCATTGTTCCTCAAGACTTCGTCTTCTGGGCA CAAGAGAGCTCATTGTTCCTTAAGACTTCGTCTTCTGGGCA Direct Gain 0 0.946008270543857 0 0.980408608913422 prediction 0.892016541087714 Functional Gain - HYAL4 ENSG00000106302 CDS Human protein_coding chr7:123509056 chr7:123509056 synonymous SNV . 0 21 hPsi_associated_SNPs_107477 0 0 0 0 0 Nucleus 0 0.438790244671599 0.960817217826844 0 hPsi_site_6437 iPseU_CNN:0.960817217826844;iRNA_PseU:0 6438 chr5 167841479 167841479 1 + C T SKCM 167841479 + 167841459 167841499 41 CTGCTGAAGGAGATGCGCTTCATCAGCCCCCGCAAGTGGAC CTGCTGAAGGAGATGCGCTTTATCAGCCCCCGCAAGTGGAC Direct Gain 0 0.946006636394572 0 0.997266113758087 prediction 0.892013272789143 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167841479 chr5:167841479 synonymous SNV . 0 21 hPsi_associated_SNPs_107478 0 0 1 0 0 Ribosome 0 0.43882629868003 0.994532227516174 0 hPsi_site_6438 iPseU_CNN:0.994532227516174;iRNA_PseU:0 6439 chr2 98885925 98885925 1 + G A rs2221416 98885925 - 98885905 98885945 41 AATGCTGATGAGAACAGTGGCATATTTTGCAGGTCAGGTTG AATGCTGATGAGAACAGTGGTATATTTTGCAGGTCAGGTTG Direct Gain 0 0.946003465439285 0 0.0672271847724915 prediction 0.892006930878571 Functional Gain - VWA3B ENSG00000168658 UTR3 Human protein_coding chr2:98885925 chr2:98885925 . . 0 21 hPsi_associated_SNPs_107479 0 0 0 0 0 exosome 0 0.43873897007117 0 0 hPsi_site_6439 iPseU_CNN:0;iRNA_PseU:0 6440 chr18 59195254 59195254 1 + C A LUSC 59195254 - 59195234 59195274 41 AAAACGCATCTCTAGGTGAGGATTGGCTCCCTCCACCTTTA AAAACGCATCTCTAGGTGAGTATTGGCTCCCTCCACCTTTA Direct Gain 0 0.945997639659068 0 0.800763070583344 prediction 0.891995279318135 Functional Gain - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59195254 chr18:59195254 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107480 0 0 0 0 0 nucleus 0 0.43871861927081 0.601526141166688 0 hPsi_site_6440 iPseU_CNN:0.601526141166688;iRNA_PseU:0 6441 chr17 41290895 41290895 1 + G A UCEC 41290895 - 41290875 41290915 41 AGAAGTCAGGAAACTTGGGACACCGCTGCTGAGGTCCTTGC AGAAGTCAGGAAACTTGGGATACCGCTGCTGAGGTCCTTGC Direct Gain 0 0.945997517896904 0 0.388415396213531 prediction 0.891995035793807 Functional Gain - NBR2 ENSG00000198496 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:41290895 chr17:41290895 . . 0 21 hPsi_associated_SNPs_107481 0 0 0 0 0 unknown 0 0.438718660146861 0 0 hPsi_site_6441 iPseU_CNN:0;iRNA_PseU:0 6442 chr5 140754184 140754184 1 + C T UCEC 140754184 + 140754164 140754204 41 CTCAGTGGTAATAGTCACTTCTCAGTGGACGTGCAAAGCGA CTCAGTGGTAATAGTCACTTTTCAGTGGACGTGCAAAGCGA Direct Gain 0 0.945994217460099 0 0.929560422897339 prediction 0.891988434920198 Functional Gain - PCDHGA6 ENSG00000253731 CDS Human protein_coding chr5:140754184 chr5:140754184 synonymous SNV . 0 21 hPsi_associated_SNPs_107482 0 0 0 0 0 exosome 0 0.438961370266409 0.859120845794678 0 hPsi_site_6442 iPseU_CNN:0.859120845794678;iRNA_PseU:0 6443 chr19 11039570 11039570 1 + G A rs544209641 11039570 - 11039550 11039590 41 AGCCGCGCCCACACTCCCGGCTTCGCCACTACCGCGTCGCC AGCCGCGCCCACACTCCCGGTTTCGCCACTACCGCGTCGCC Direct Gain 0 0.945992643000971 0 0.999514877796173 prediction 0.891985286001943 Functional Gain - TIMM29 ENSG00000142444 CDS Human protein_coding chr19:11039570 chr19:11039570 synonymous SNV . 0 21 hPsi_associated_SNPs_107483 0 0 0 0 0 unknown 0 0.438718600728563 0.999029755592346 0 hPsi_site_6443 iPseU_CNN:0.999029755592346;iRNA_PseU:0 6444 chr12 41327626 41327626 1 + G A BLCA 41327626 - 41327606 41327646 41 TCCTCTAATGTTCTCAGCCTCACATTCATAGATGCCTTCAT TCCTCTAATGTTCTCAGCCTTACATTCATAGATGCCTTCAT Direct Gain 0 0.945990989899719 0 0.998794913291931 prediction 0.891981979799438 Functional Gain - CNTN1 ENSG00000018236 CDS Human protein_coding chr12:41327626 chr12:41327626 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107484 0 0 0 0 0 exosome 0 0.438872608340197 0.997589826583862 0 hPsi_site_6444 iPseU_CNN:0.997589826583862;iRNA_PseU:0 6445 chr12 124081256 124081256 1 + G T UCEC 124081256 + 124081236 124081276 41 ACTACCTGAAGAGATTTTTTGAAGTCCGGAGAGTTGTTTAA ACTACCTGAAGAGATTTTTTTAAGTCCGGAGAGTTGTTTAA Direct Gain 0 0.945985606178296 0 0.713675379753113 prediction 0.891971212356592 Functional Gain - TMED2 ENSG00000086598 CDS Human protein_coding chr12:124081256 chr12:124081256 stopgain 1.000 1 21 hPsi_associated_SNPs_107485 0 0 1 0 0 Ribosome 0 0.438718416047761 0.427350759506226 0 hPsi_site_6445 iPseU_CNN:0.427350759506226;iRNA_PseU:0 6446 chr2 191235618 191235618 1 + G A UCEC 191235618 - 191235598 191235638 41 ATGGTGAGCTGTAGTGAATGCATGTTGGTCCCCATGTAAGA ATGGTGAGCTGTAGTGAATGTATGTTGGTCCCCATGTAAGA Direct Gain 0 0.945984775437737 0 0.210795789957047 prediction 0.891969550875475 Functional Gain - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191235618 chr2:191235618 nonsynonymous SNV 0.350 0 21 hPsi_associated_SNPs_107486 0 0 0 0 0 exosome 0 0.438718592092312 0 0 hPsi_site_6446 iPseU_CNN:0;iRNA_PseU:0 6447 chr15 84581974 84581974 1 + G A SKCM 84581974 - 84581954 84581994 41 TTCGGTGGGCAGCTTGGGGCCTTCACACTCTTCCTCGGGCA TTCGGTGGGCAGCTTGGGGCTTTCACACTCTTCCTCGGGCA Direct Gain 0 0.945983045882405 0 0.984596848487854 prediction 0.891966091764811 Functional Gain - ADAMTSL3 ENSG00000156218 CDS Human protein_coding chr15:84581974 chr15:84581974 nonsynonymous SNV 0.998 2 21 hPsi_associated_SNPs_107487 0 0 0 0 0 cytosol 0 0.43866620533027 0.969193696975708 0 hPsi_site_6447 iPseU_CNN:0.969193696975708;iRNA_PseU:0 6448 chr15 69011069 69011069 1 + G A STAD 69011069 - 69011049 69011089 41 GAAGCGGAACACCTCGCAGGCTGACACATCCAGCCCGTGCT GAAGCGGAACACCTCGCAGGTTGACACATCCAGCCCGTGCT Direct Gain 0 0.945982089413721 0 0.986579060554504 prediction 0.891964178827442 Functional Gain - CORO2B ENSG00000103647 CDS Human protein_coding chr15:69011069 chr15:69011069 nonsynonymous SNV 0.992 1 21 hPsi_associated_SNPs_107488 0 0 0 0 0 exosome 0 0.438685849978245 0.973158121109008 0 hPsi_site_6448 iPseU_CNN:0.973158121109008;iRNA_PseU:0 6449 chr11 65124563 65124563 1 + G A UCEC 65124563 - 65124543 65124583 41 AGGGCATCAGCTTTGGTGGGCAGGGGCTCAAAGGCACCCTC AGGGCATCAGCTTTGGTGGGTAGGGGCTCAAAGGCACCCTC Direct Gain 0 0.945980171093656 0 0.99278736114502 prediction 0.891960342187313 Functional Gain - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65124563 chr11:65124563 synonymous SNV . 0 21 hPsi_associated_SNPs_107489 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592994992 0.98557472229004 0 hPsi_site_6449 iPseU_CNN:0.98557472229004;iRNA_PseU:0 6450 chr7 143701311 143701311 1 + C A LUAD 143701311 - 143701291 143701331 41 AACTTGGGCACAGTCACAGAGATGTACCAGGTCTCCAAGAA AACTTGGGCACAGTCACAGATATGTACCAGGTCTCCAAGAA Direct Gain 0 0.945963759676917 0 0.996570527553558 prediction 0.891927519353835 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701311 chr7:143701311 synonymous SNV . 0 21 hPsi_associated_SNPs_107490 0 0 0 0 0 unknown 0 0.436715362513552 0.993141055107116 0 hPsi_site_6450 iPseU_CNN:0.993141055107116;iRNA_PseU:0 6451 chr22 23214171 23214171 1 + C A UCEC 23214171 - 23214151 23214191 41 CGTGTGGCTCTCTCCACAGTGATACTCAGCCTCATCGTCAG CGTGTGGCTCTCTCCACAGTTATACTCAGCCTCATCGTCAG Direct Gain 0 0.945962267619442 0 0.999965667724609 prediction 0.891924535238884 Functional Gain - MIR650;MIR5571 ENSG00000211672 CDS Human IG_V_gene chr22:23214171 chr22:23214171 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107491 0 0 0 0 0 unknown 0 0.434948648636838 0.999931335449218 0 hPsi_site_6451 iPseU_CNN:0.999931335449218;iRNA_PseU:0 6452 chr1 203456003 203456003 1 + C A LUAD 203456003 - 203455983 203456023 41 TGGCGGAGTAGGGCCTAGATGACCACGGACTGCAGGAGGCG TGGCGGAGTAGGGCCTAGATTACCACGGACTGCAGGAGGCG Direct Gain 0 0.945960824924535 0 0.0160170793533325 prediction 0.891921649849069 Functional Gain - PRELP ENSG00000188783 CDS Human protein_coding chr1:203456003 chr1:203456003 synonymous SNV . 0 21 hPsi_associated_SNPs_107492 0 0 0 0 0 exosome 0 0.438713908254946 0 0 hPsi_site_6452 iPseU_CNN:0;iRNA_PseU:0 6453 chr9 140001845 140001845 1 + G A rs144271949 140001845 - 140001825 140001865 41 TAAAGGTTGAAGTGCACGATCTCGGGACTCAGCCCCGTCTC TAAAGGTTGAAGTGCACGATTTCGGGACTCAGCCCCGTCTC Direct Gain 0 0.945960821451032 0 0.595055103302002 prediction 0.891921642902064 Functional Gain - MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140001845 chr9:140001845 synonymous SNV . 0 21 hPsi_associated_SNPs_107493 0 0 0 0 0 Ribosome 0 0.438647121930084 0.190110206604004 0 hPsi_site_6453 iPseU_CNN:0.190110206604004;iRNA_PseU:0 6454 chr11 7059931 7059931 1 + G A LUAD 7059931 - 7059911 7059951 41 GTCAGGCCATGCTCAGGTTCCATGGTCTCCTTTAGGAATAA GTCAGGCCATGCTCAGGTTCTATGGTCTCCTTTAGGAATAA Direct Gain 0 0.945957235897624 0 0.999193072319031 prediction 0.891914471795248 Functional Gain - NLRP14 ENSG00000158077 CDS Human protein_coding chr11:7059931 chr11:7059931 nonsynonymous SNV 0.239 0 21 hPsi_associated_SNPs_107494 0 0 0 0 0 cytosol 0 0.438699196436153 0.998386144638062 0 hPsi_site_6454 iPseU_CNN:0.998386144638062;iRNA_PseU:0 6455 chrX 48625153 48625153 1 + C A rs782078556 48625153 - 48625133 48625173 41 ATTTTTGTTTGATTTTTTTTGATACAGTCTTGCTCTGTCAC ATTTTTGTTTGATTTTTTTTTATACAGTCTTGCTCTGTCAC Direct Gain 0 0.945954807565551 0 0.40221044421196 prediction 0.891909615131102 Functional Gain - GLOD5 ENSG00000171433 intronic Human protein_coding chrX:48625153 chrX:48625153 . . 0 21 hPsi_associated_SNPs_107495 0 0 0 0 0 chromatin 0 0.438914799363021 0 0 hPsi_site_6455 iPseU_CNN:0;iRNA_PseU:0 6456 chr1 200880665 200880665 1 + G A LUAD 200880665 - 200880645 200880685 41 GCGGGAAAGCAGGAATCTGGCACTGTCACCGTGTAGTGAGT GCGGGAAAGCAGGAATCTGGTACTGTCACCGTGTAGTGAGT Direct Gain 0 0.945954188350189 0 0.996840476989746 prediction 0.891908376700377 Functional Gain - C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200880665 chr1:200880665 synonymous SNV . 0 21 hPsi_associated_SNPs_107496 0 0 0 0 0 cytosol 0 0.438721162494048 0.993680953979492 0 hPsi_site_6456 iPseU_CNN:0.993680953979492;iRNA_PseU:0 6457 chr12 58196528 58196528 1 + G A rs10783848 58196528 - 58196508 58196548 41 GTTTCTAGGAAACTCTCAGGCTTCTGCCTTAGGTGACTAGA GTTTCTAGGAAACTCTCAGGTTTCTGCCTTAGGTGACTAGA Direct Gain 0 0.945952986281222 0 0.999834179878235 prediction 0.891905972562445 Functional Gain - TSFM ENSG00000123297 UTR3 Human protein_coding chr12:58196528 chr12:58196528 . . 0 21 hPsi_associated_SNPs_107497 0 0 0 0 0 Cytosol 0 0.438709268354613 0.99966835975647 0 hPsi_site_6457 iPseU_CNN:0.99966835975647;iRNA_PseU:0 6458 chr20 59228108 59228108 1 + G A rs73136030 59228108 - 59228088 59228128 41 CTGGAACTTCTACCAGGAATCAAAGACCCCCTTTCTGTGTC CTGGAACTTCTACCAGGAATTAAAGACCCCCTTTCTGTGTC Direct Gain 0 0.945952648800046 0 0.861172914505005 prediction 0.891905297600091 Functional Gain - MIR548AG2;LINC01718 ENSG00000265617;ENSG00000261035 intergenic Human other chr20:59228108 chr20:59228108 . . 0 21 hPsi_associated_SNPs_107498 0 0 0 0 0 unknown 0 0.438718592995172 0.72234582901001 0 hPsi_site_6458 iPseU_CNN:0.72234582901001;iRNA_PseU:0 6459 chr18 12277226 12277226 1 + C T UCEC 12277226 + 12277206 12277246 41 GGATGACAAGGAAGAGCGGCCATCCCTCCGGTCACAAGCCA GGATGACAAGGAAGAGCGGCTATCCCTCCGGTCACAAGCCA Direct Gain 0 0.945952376053702 0 0.998429238796234 prediction 0.891904752107405 Functional Gain - CIDEA ENSG00000176194 CDS Human protein_coding chr18:12277226 chr18:12277226 nonsynonymous SNV 0.019 1 21 hPsi_associated_SNPs_107499 0 0 0 0 0 unknown 0 0.438718604296781 0.996858477592468 0 hPsi_site_6459 iPseU_CNN:0.996858477592468;iRNA_PseU:0 6460 chr6 30917654 30917654 1 + G T UCEC 30917654 + 30917634 30917674 41 GAAACGACAGCCAACGAGAAGACCACACTATCCCCAGTAGA GAAACGACAGCCAACGAGAATACCACACTATCCCCAGTAGA Direct Gain 0 0.945945706416946 0 0.667822360992432 prediction 0.891891412833892 Functional Gain - DPCR1 ENSG00000168631 CDS Human protein_coding chr6:30917654 chr6:30917654 nonsynonymous SNV 0.001 1 21 hPsi_associated_SNPs_107500 0 0 0 0 0 exosome 0 0.438718575701668 0.335644721984864 0 hPsi_site_6460 iPseU_CNN:0.335644721984864;iRNA_PseU:0 6461 chr8 25325900 25325900 1 + G A STAD 25325900 - 25325880 25325920 41 ATCTACAGAAGTTTCAACTGCACATGCTCTGTCTGTATCAA ATCTACAGAAGTTTCAACTGTACATGCTCTGTCTGTATCAA Direct Gain 0 0.945927875865497 0 0.915265321731567 prediction 0.891855751730994 Functional Gain - CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25325900 chr8:25325900 nonsynonymous SNV 0.014 0 21 hPsi_associated_SNPs_107501 0 0 0 0 0 Nucleus 0 0.438748122867789 0.830530643463134 0 hPsi_site_6461 iPseU_CNN:0.830530643463134;iRNA_PseU:0 6462 chr6 158516862 158516862 1 + G A COAD 158516862 - 158516842 158516882 41 GGCGCCTCCAGAGGTGGTGGCACAGAGGCTCCTGCCCCAGG GGCGCCTCCAGAGGTGGTGGTACAGAGGCTCCTGCCCCAGG Direct Gain 0 0.945926776957259 0 0.888818681240082 prediction 0.891853553914518 Functional Gain - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158516862 chr6:158516862 synonymous SNV . 0 21 hPsi_associated_SNPs_107502 0 0 0 0 0 Cytosol 0 0.438536474836975 0.777637362480164 0 hPsi_site_6462 iPseU_CNN:0.777637362480164;iRNA_PseU:0 6463 chr8 30032679 30032679 1 + T A SKCM 30032679 - 30032659 30032699 41 TGATAAGGGCCTGTTCTTCTATTAGGTTCCCTTCGCCAATC TGATAAGGGCCTGTTCTTCTTTTAGGTTCCCTTCGCCAATC Direct Gain 0 0.945926649237134 0 0.990306615829468 prediction 0.891853298474268 Functional Gain - DCTN6 ENSG00000104671 CDS Human protein_coding chr8:30032679 chr8:30032679 nonsynonymous SNV 0.989 3 21 hPsi_associated_SNPs_107503 0 0 0 0 0 Ribosome 0 0.438738920177486 0.980613231658936 0 hPsi_site_6463 iPseU_CNN:0.980613231658936;iRNA_PseU:0 6464 chr3 138670599 138670599 1 + G A rs116191388 138670599 - 138670579 138670619 41 GGCAACTTTTAAGAACACATCATGTTCCCCAGCAAGCCTGA GGCAACTTTTAAGAACACATTATGTTCCCCAGCAAGCCTGA Direct Gain 0 0.945925717374294 0 7.91251659393311e-05 prediction 0.891851434748588 Functional Gain - FOXL2NB ENSG00000206262 UTR3 Human protein_coding chr3:138670599 chr3:138670599 . . 0 21 hPsi_associated_SNPs_107504 0 0 0 0 0 Nucleus 0 0.438718834388338 0 0 hPsi_site_6464 iPseU_CNN:0;iRNA_PseU:0 6465 chr16 76556051 76556051 1 + C A CESC 76556051 - 76556031 76556071 41 TGAAGGGAGGCCTCCTTCATGTTCCTTTCAACCCTCACATG TGAAGGGAGGCCTCCTTCATTTTCCTTTCAACCCTCACATG Direct Gain 0 0.945925202695224 0 0.735059261322021 prediction 0.891850405390447 Functional Gain - CNTNAP4 ENSG00000152910 CDS Human protein_coding chr16:76556051 chr16:76556051 nonsynonymous SNV 0.480 4 21 hPsi_associated_SNPs_107505 0 0 0 0 0 exosome 0 0.438713571226624 0.470118522644042 0 hPsi_site_6465 iPseU_CNN:0.470118522644042;iRNA_PseU:0 6466 chr3 14166552 14166552 1 + G A rs17038940 14166552 - 14166532 14166572 41 GGGCCAAGCGGGACTTACTGCAGTTACCTCCCCCTGTGCCC GGGCCAAGCGGGACTTACTGTAGTTACCTCCCCCTGTGCCC Direct Gain 0 0.945924970072801 0 0.999826788902283 prediction 0.891849940145601 Functional Gain - TMEM43 ENSG00000170876 UTR5 Human protein_coding chr3:14166552 chr3:14166552 . . 0 21 hPsi_associated_SNPs_107506 1 0 0 0 0 Ribosome 0 0.438552619356409 0.999653577804566 0 hPsi_site_6466 iPseU_CNN:0.999653577804566;iRNA_PseU:0 6467 chr7 155504079 155504079 1 + G A SKCM 155504079 - 155504059 155504099 41 TTCTTGGGCTGCTGTGGAGTCACGGGTGGCGGGGTCATCAT TTCTTGGGCTGCTGTGGAGTTACGGGTGGCGGGGTCATCAT Direct Gain 0 0.94592335269189 0 0.991683840751648 prediction 0.891846705383781 Functional Gain - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155504079 chr7:155504079 synonymous SNV . 0 21 hPsi_associated_SNPs_107507 0 0 0 0 0 Nucleus 0 0.438722300909744 0.983367681503296 0 hPsi_site_6467 iPseU_CNN:0.983367681503296;iRNA_PseU:0 6468 chr22 26706735 26706735 1 + C A LIHC 26706735 - 26706715 26706755 41 GTGAACTCGATGCGGATGGTGTTGCCTTCGCTCAGCAGGCC GTGAACTCGATGCGGATGGTTTTGCCTTCGCTCAGCAGGCC Direct Gain 0 0.945921169171435 0 0.996760666370392 prediction 0.891842338342869 Functional Gain - SEZ6L ENSG00000100095 CDS Human protein_coding chr22:26706735 chr22:26706735 nonsynonymous SNV 0.211 0 21 hPsi_associated_SNPs_107508 0 0 0 0 0 exosome 0 0.438890442905334 0.993521332740784 0 hPsi_site_6468 iPseU_CNN:0.993521332740784;iRNA_PseU:0 6469 chr1 143163656 143163656 1 + G A CHOL 143163656 - 143163636 143163676 41 GAGGGCTGAGGTCACACCAGCTCCATCTCATGTGCAAGACC GAGGGCTGAGGTCACACCAGTTCCATCTCATGTGCAAGACC Direct Gain 0 0.945920608957185 0 0.998241543769836 prediction 0.891841217914371 Functional Gain - LOC102723769 ENSG00000230850;ENSG00000232274;ENSG00000237291 ncRNA_intronic Human other chr1:143163656 chr1:143163656 . . 0 21 hPsi_associated_SNPs_107509 0 0 0 0 0 unknown 0 0.438871818757351 0.996483087539672 0 hPsi_site_6469 iPseU_CNN:0.996483087539672;iRNA_PseU:0 6470 chr10 25465050 25465050 1 + T A UCEC 25465050 - 25465030 25465070 41 GATTGGGGCCGCGGCGGTGTAAGTGGGGCCTCCACTTGCGC GATTGGGGCCGCGGCGGTGTTAGTGGGGCCTCCACTTGCGC Direct Gain 0 0.945919373443586 0 0.696889877319336 prediction 0.891838746887172 Functional Gain - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25465050 chr10:25465050 stopgain 0.996 0 21 hPsi_associated_SNPs_107510 0 0 0 0 0 Endoplasmic reticulum 0 0.438718642319937 0.393779754638672 0 hPsi_site_6470 iPseU_CNN:0.393779754638672;iRNA_PseU:0 6471 chr20 371973 371973 1 + G A ESCA 371973 - 371953 371993 41 CTTGTGCGGGGGCAGCCGCGCATAGGGCTCCAGCACGGCCA CTTGTGCGGGGGCAGCCGCGTATAGGGCTCCAGCACGGCCA Direct Gain 0 0.945917517981057 0 0.988864481449127 prediction 0.891835035962114 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:371973 chr20:371973 nonsynonymous SNV 0.007 0 21 hPsi_associated_SNPs_107511 0 0 0 0 0 Ribosome 0 0.431140131878817 0.977728962898254 0 hPsi_site_6471 iPseU_CNN:0.977728962898254;iRNA_PseU:0 6472 chr1 202287109 202287109 1 + G A SKCM 202287109 - 202287089 202287129 41 CAGGCGGATGCCCCAGCTTTCAAAGAGGTACTCACAGGGCT CAGGCGGATGCCCCAGCTTTTAAAGAGGTACTCACAGGGCT Direct Gain 0 0.945916862841234 0 0.571470379829407 prediction 0.891833725682468 Functional Gain - LGR6 ENSG00000133067 CDS Human protein_coding chr1:202287109 chr1:202287109 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107512 0 0 0 0 0 nucleoplasm 0 0.438716743307932 0.142940759658814 0 hPsi_site_6472 iPseU_CNN:0.142940759658814;iRNA_PseU:0 6473 chr6 132874708 132874708 1 + G A SKCM 132874708 - 132874688 132874728 41 AGCACTCCAACAGCAAATTTCATAGATATAGGCAGGGGTCA AGCACTCCAACAGCAAATTTTATAGATATAGGCAGGGGTCA Direct Gain 0 0.945909857630768 0 0.495428323745728 prediction 0.891819715261537 Functional Gain - TAAR8 ENSG00000146385 CDS Human protein_coding chr6:132874708 chr6:132874708 nonsynonymous SNV 0.228 2 21 hPsi_associated_SNPs_107513 0 0 0 0 0 unknown 0 0.438718562480998 0 0 hPsi_site_6473 iPseU_CNN:0;iRNA_PseU:0 6474 chr1 87031618 87031618 1 + C T THCA 87031618 + 87031598 87031638 41 AAACACCATACCCATGGTGACACCACCTCCTCCACCTGTCT AAACACCATACCCATGGTGATACCACCTCCTCCACCTGTCT Direct Gain 0 0.945903339183629 0 0.975100994110107 prediction 0.891806678367258 Functional Gain - CLCA4 ENSG00000016602 CDS Human protein_coding chr1:87031618 chr1:87031618 nonsynonymous SNV 0.015 0 21 hPsi_associated_SNPs_107514 0 0 0 0 1 unknown 0 0.438718515245141 0.950201988220214 0 hPsi_site_6474 iPseU_CNN:0.950201988220214;iRNA_PseU:0 6475 chr14 59830419 59830419 1 + G T UCEC 59830419 + 59830399 59830439 41 CAGCCCGGAGATAAGTTTGTGTCTGTTGTCAGCCAGTTCAT CAGCCCGGAGATAAGTTTGTTTCTGTTGTCAGCCAGTTCAT Direct Gain 0 0.945900412160392 0 0.00316309928894043 prediction 0.891800824320784 Functional Gain - DAAM1 ENSG00000100592 CDS Human protein_coding chr14:59830419 chr14:59830419 synonymous SNV . 0 21 hPsi_associated_SNPs_107515 0 0 1 0 2 Cytosol 0 0.438679128294497 0 0 hPsi_site_6475 iPseU_CNN:0;iRNA_PseU:0 6476 chr11 47436342 47436342 1 + C T SKCM 47436342 + 47436322 47436362 41 CTTCAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTT CTTCAGGTGGGCGACTTTGCTATCCTGCTCCGGGCCGGCTT Direct Gain 0 0.945897799608367 0 0.945444524288177 prediction 0.891795599216733 Functional Gain - SLC39A13 ENSG00000165915 CDS Human protein_coding chr11:47436342 chr11:47436342 synonymous SNV . 0 21 hPsi_associated_SNPs_107516 0 0 1 0 1 Endoplasmic reticulum 0 0.438720591411813 0.890889048576354 0 hPsi_site_6476 iPseU_CNN:0.890889048576354;iRNA_PseU:0 6477 chr1 150476871 150476871 1 + G A OV 150476871 - 150476851 150476891 41 TCTCAGGGGCAGTTGGAAGTCAAGCTGAATTGTCCCACACT TCTCAGGGGCAGTTGGAAGTTAAGCTGAATTGTCCCACACT Direct Gain 0 0.945889683064185 0 0.999991536140442 prediction 0.891779366128369 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150476871 chr1:150476871 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107517 0 0 0 0 0 Ribosome 0 0.438718625441399 0.999983072280884 0 hPsi_site_6477 iPseU_CNN:0.999983072280884;iRNA_PseU:0 6478 chr19 45913893 45913893 1 + A T rs145718451 45913893 + 45913873 45913913 41 CCATCTCCCTGCCAGCCCCTAACTACCCTCCCCAGCCTCCA CCATCTCCCTGCCAGCCCCTTACTACCCTCCCCAGCCTCCA Direct Gain 0 0.945888295198022 0 0.994338631629944 prediction 0.891776590396043 Functional Gain - CD3EAP ENSG00000117877 UTR3 Human protein_coding chr19:45913893 chr19:45913893 . . 0 21 hPsi_associated_SNPs_107518 0 0 1 0 0 Ribosome 0 0.438718591408118 0.988677263259888 0 hPsi_site_6478 iPseU_CNN:0.988677263259888;iRNA_PseU:0 6479 chr6 26501556 26501556 1 + C T BLCA 26501556 + 26501536 26501576 41 GGTCTCCCCAGATGTCTGCTCACCCTCATTCTCCTCCAGCT GGTCTCCCCAGATGTCTGCTTACCCTCATTCTCCTCCAGCT Direct Gain 0 0.945887114820856 0 0.99389636516571 prediction 0.891774229641713 Functional Gain - BTN1A1 ENSG00000124557 CDS Human protein_coding chr6:26501556 chr6:26501556 synonymous SNV . 0 21 hPsi_associated_SNPs_107519 0 0 0 0 1 nucleoplasm 0 0.438718042207283 0.98779273033142 0 hPsi_site_6479 iPseU_CNN:0.98779273033142;iRNA_PseU:0 6480 chr6 151673036 151673036 1 + G A SKCM 151673036 - 151673016 151673056 41 ACGGGGGTGCTTCCATCAGTCTCACTGTCTGTAGGGGTTTC ACGGGGGTGCTTCCATCAGTTTCACTGTCTGTAGGGGTTTC Direct Gain 0 0.945886566903968 0 0.994674205780029 prediction 0.891773133807937 Functional Gain - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151673036 chr6:151673036 synonymous SNV . 0 21 hPsi_associated_SNPs_107520 0 0 0 0 0 Ribosome 0 0.438718937036741 0.989348411560058 0 hPsi_site_6480 iPseU_CNN:0.989348411560058;iRNA_PseU:0 6481 chr15 25442580 25442580 1 + G A UCEC 25442580 - 25442560 25442600 41 CTAAGCACCTGGCTGAGGGACATTTTCCCGGGGCCAGTGGG CTAAGCACCTGGCTGAGGGATATTTTCCCGGGGCCAGTGGG Direct Gain 0 0.945885527124143 0 0.999902188777924 prediction 0.891771054248286 Functional Gain - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25442580 chr15:25442580 . . 0 21 hPsi_associated_SNPs_107521 0 0 0 0 0 unknown 0 0.438718132839075 0.999804377555848 0 hPsi_site_6481 iPseU_CNN:0.999804377555848;iRNA_PseU:0 6482 chr19 7623800 7623800 1 + G A LUSC 7623800 - 7623780 7623820 41 CCGTAGGTGCTGAGGTCCGTCTCATCCTGGCTCCCCACGTC CCGTAGGTGCTGAGGTCCGTTTCATCCTGGCTCCCCACGTC Direct Gain 0 0.945877940866905 0 0.999999701976776 prediction 0.891755881733811 Functional Gain - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7623800 chr19:7623800 synonymous SNV . 0 21 hPsi_associated_SNPs_107522 0 0 0 0 0 Ribosome 0 0.438729975661808 0.999999403953552 0 hPsi_site_6482 iPseU_CNN:0.999999403953552;iRNA_PseU:0 6483 chr2 173340398 173340398 1 + T A GBM 173340398 - 173340378 173340418 41 GTTACCTGTGTTGGTTTGGTATTTATTCCATTTGCAGATCC GTTACCTGTGTTGGTTTGGTTTTTATTCCATTTGCAGATCC Direct Gain 0 0.945873559785245 0 0.772489011287689 prediction 0.891747119570491 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173340398 chr2:173340398 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_107523 0 0 0 0 0 Nucleus 0 0.438717954657629 0.544978022575378 0 hPsi_site_6483 iPseU_CNN:0.544978022575378;iRNA_PseU:0 6484 chr15 69003166 69003166 1 + C A UCEC 69003166 - 69003146 69003186 41 TTGGTGGTGGGGTGCCACTCGACCAGCCCCACACGCCGGCT TTGGTGGTGGGGTGCCACTCTACCAGCCCCACACGCCGGCT Direct Gain 0 0.945873425509026 0 0.997383952140808 prediction 0.891746851018051 Functional Gain - CORO2B ENSG00000103647 CDS Human protein_coding chr15:69003166 chr15:69003166 synonymous SNV . 0 21 hPsi_associated_SNPs_107524 0 0 0 0 0 exosome 0 0.438718538816607 0.994767904281616 0 hPsi_site_6484 iPseU_CNN:0.994767904281616;iRNA_PseU:0 6485 chr19 3590796 3590796 1 + G A rs543096741 3590796 - 3590776 3590816 41 GTTCTAGAGCTGGGCTCGGTCTCAGAGCCCATCTGAGTTCT GTTCTAGAGCTGGGCTCGGTTTCAGAGCCCATCTGAGTTCT Direct Gain 0 0.945863825087902 0 0.959604859352112 prediction 0.891727650175804 Functional Gain - GIPC3 ENSG00000179855 UTR3 Human protein_coding chr19:3590796 chr19:3590796 . . 0 21 hPsi_associated_SNPs_107525 0 0 0 0 0 exosome 0 0.438717092529401 0.919209718704224 0 hPsi_site_6485 iPseU_CNN:0.919209718704224;iRNA_PseU:0 6486 chr10 133930919 133930919 1 + C A OV 133930919 - 133930899 133930939 41 TTGGCGCCCTTGAGCTCGGAGATCTCCTGCTGCATCTTGAC TTGGCGCCCTTGAGCTCGGATATCTCCTGCTGCATCTTGAC Direct Gain 0 0.945860375689787 0 0.972010254859924 prediction 0.891720751379574 Functional Gain - JAKMIP3 ENSG00000188385 CDS Human protein_coding chr10:133930919 chr10:133930919 synonymous SNV . 0 21 hPsi_associated_SNPs_107526 0 0 0 0 0 Cytosol 0 0.43871895348303 0.944020509719848 0 hPsi_site_6486 iPseU_CNN:0.944020509719848;iRNA_PseU:0 6487 chr16 68961693 68961693 1 + C T SARC 68961693 + 68961673 68961713 41 AAGAGCAGCAACAAACCAGTCATGAAAGACCCACTGATGTA AAGAGCAGCAACAAACCAGTTATGAAAGACCCACTGATGTA Direct Gain 0 0.94585725061113 0 0.99999988079071 prediction 0.89171450122226 Functional Gain - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68961693 chr16:68961693 nonsynonymous SNV 0.003 0 21 hPsi_associated_SNPs_107527 0 0 0 0 0 Nucleus 0 0.438718512439936 0.99999976158142 0 hPsi_site_6487 iPseU_CNN:0.99999976158142;iRNA_PseU:0 6488 chr18 14828284 14828284 1 + G A CESC 14828284 - 14828264 14828304 41 AATGTGGACTCTACAGAACTCACATCCTCTATTAAAGAAAA AATGTGGACTCTACAGAACTTACATCCTCTATTAAAGAAAA Direct Gain 0 0.94585715074755 0 0.999961137771606 prediction 0.891714301495101 Functional Gain - ANKRD30B ENSG00000180777 CDS Human protein_coding chr18:14828284 chr18:14828284 synonymous SNV . 0 21 hPsi_associated_SNPs_107528 0 0 0 0 0 exosome 0 0.43871750138797 0.999922275543212 0 hPsi_site_6488 iPseU_CNN:0.999922275543212;iRNA_PseU:0 6489 chr5 140789477 140789477 1 + G A PAAD 140789477 - 140789457 140789497 41 ATCGAAGAACGCGGAGCCGTCAGGACCCAGAGCTGGGTACA ATCGAAGAACGCGGAGCCGTTAGGACCCAGAGCTGGGTACA Direct Gain 0 0.945856598894668 0 0.996507883071899 prediction 0.891713197789336 Functional Gain - PCDHGB6 ENSG00000253305 CDS Human protein_coding chr5:140789477 chr5:140789477 nonsynonymous SNV 0.260 3 21 hPsi_associated_SNPs_107529 0 0 0 0 0 exosome 0 0.438718592993822 0.993015766143798 0 hPsi_site_6489 iPseU_CNN:0.993015766143798;iRNA_PseU:0 6490 chr12 122677528 122677528 1 + T A STAD 122677528 - 122677508 122677548 41 GGGGACGGGCAGAGCCGGGGATCTATACGCAGCCTCAACTT GGGGACGGGCAGAGCCGGGGTTCTATACGCAGCCTCAACTT Direct Gain 0 0.945855691301764 0 0.917678952217102 prediction 0.891711382603527 Functional Gain - LRRC43 ENSG00000158113 CDS Human protein_coding chr12:122677528 chr12:122677528 nonsynonymous SNV 0.013 2 21 hPsi_associated_SNPs_107530 0 0 0 0 0 cytosol 0 0.438718593085225 0.835357904434204 0 hPsi_site_6490 iPseU_CNN:0.835357904434204;iRNA_PseU:0 6491 chr1 204521516 204521516 1 + T A rs72644181 204521516 - 204521496 204521536 41 AGAGGTTGCGGTGAGCAGAGATCATGCCATTGCACTCCAGC AGAGGTTGCGGTGAGCAGAGTTCATGCCATTGCACTCCAGC Direct Gain 0 0.945855031180644 0 0.999891996383667 prediction 0.891710062361289 Functional Gain - MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521516 chr1:204521516 . . 0 21 hPsi_associated_SNPs_107531 0 0 0 0 0 Cytosol 0 0.438647965010328 0.999783992767334 0 hPsi_site_6491 iPseU_CNN:0.999783992767334;iRNA_PseU:0 6492 chr2 227704146 227704146 1 + T A rs957630 227704146 - 227704126 227704166 41 GGCTCCTGAGTTTTACAGGTAAGATTCTGTTTAAGAGGCTC GGCTCCTGAGTTTTACAGGTTAGATTCTGTTTAAGAGGCTC Direct Gain 0 0.9458530269254 0 0.991612792015076 prediction 0.891706053850799 Functional Gain - RHBDD1 ENSG00000144468 UTR5 Human protein_coding chr2:227704146 chr2:227704146 . . 0 21 hPsi_associated_SNPs_107532 0 0 0 0 0 Endoplasmic reticulum 0 0.438718590810606 0.983225584030152 0 hPsi_site_6492 iPseU_CNN:0.983225584030152;iRNA_PseU:0 6493 chr9 90502826 90502826 1 + G T LUSC 90502826 + 90502806 90502846 41 TGGACATGCTCACTGCCGCAGACAGGCTGCCCACTCAAGCC TGGACATGCTCACTGCCGCATACAGGCTGCCCACTCAAGCC Direct Gain 0 0.945850606387287 0 0.323179841041565 prediction 0.891701212774574 Functional Gain - SPATA31E1 ENSG00000177992 CDS Human protein_coding chr9:90502826 chr9:90502826 nonsynonymous SNV 0.004 1 21 hPsi_associated_SNPs_107533 0 0 0 0 0 exosome 0 0.43830093868702 0 0 hPsi_site_6493 iPseU_CNN:0;iRNA_PseU:0 6494 chr13 25444837 25444837 1 + G A CESC 25444837 - 25444817 25444857 41 GGAGGAAGCGCCTCTACCTTCTTATTAACCCTCTGCAGTGC GGAGGAAGCGCCTCTACCTTTTTATTAACCCTCTGCAGTGC Direct Gain 0 0.945848162436086 0 0.979180693626404 prediction 0.891696324872172 Functional Gain - RNF17 ENSG00000132972 CDS Human protein_coding chr13:25444837 chr13:25444837 synonymous SNV . 0 21 hPsi_associated_SNPs_107534 0 0 0 0 0 exosome 0 0.438718518605737 0.958361387252808 0 hPsi_site_6494 iPseU_CNN:0.958361387252808;iRNA_PseU:0 6495 chr3 4683851 4683851 1 + G A BLCA 4683851 - 4683831 4683871 41 GCCTCGTCCAATGTGACTCTCATGGCATTCTTCTCCAACAG GCCTCGTCCAATGTGACTCTTATGGCATTCTTCTCCAACAG Direct Gain 0 0.945839441635216 0 0.999373733997345 prediction 0.891678883270432 Functional Gain - ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4683851 chr3:4683851 nonsynonymous SNV 0.885 5 21 hPsi_associated_SNPs_107535 0 0 0 0 0 Endoplasmic reticulum 0 0.43876115277833 0.99874746799469 0 hPsi_site_6495 iPseU_CNN:0.99874746799469;iRNA_PseU:0 6496 chr3 49293742 49293742 1 + C T BLCA 49293742 + 49293722 49293762 41 TCCAGTGAAAGACAGTGCTTCTCAGACGTCGCCACCTTTGG TCCAGTGAAAGACAGTGCTTTTCAGACGTCGCCACCTTTGG Direct Gain 0 0.945835570859982 0 0.824393391609192 prediction 0.891671141719963 Functional Gain - CCDC36 ENSG00000173421 CDS Human protein_coding chr3:49293742 chr3:49293742 nonsynonymous SNV 0.334 3 21 hPsi_associated_SNPs_107536 0 0 0 0 0 Nucleus 0 0.440250459765827 0.648786783218384 0 hPsi_site_6496 iPseU_CNN:0.648786783218384;iRNA_PseU:0 6497 chr1 28818246 28818246 1 + G A LGG 28818246 - 28818226 28818266 41 GTCGGCTCGCCGGTCATAATCTTGAGCATCTGTTACCTCTA GTCGGCTCGCCGGTCATAATTTTGAGCATCTGTTACCTCTA Direct Gain 0 0.945834813934033 0 0.979950606822968 prediction 0.891669627868066 Functional Gain - PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28818246 chr1:28818246 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_107537 0 0 0 0 0 Nucleus 0 0.438712061421764 0.959901213645936 0 hPsi_site_6497 iPseU_CNN:0.959901213645936;iRNA_PseU:0 6498 chr6 28227300 28227300 1 + C T BLCA 28227300 + 28227280 28227320 41 ACTCCCGCGGCCGTGAGGGCCTCAGGCCTCCTTGGAGTGAG ACTCCCGCGGCCGTGAGGGCTTCAGGCCTCCTTGGAGTGAG Direct Gain 0 0.945831238672925 0 0.343695878982544 prediction 0.891662477345851 Functional Gain - NKAPL ENSG00000189134 CDS Human protein_coding chr6:28227300 chr6:28227300 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_107538 0 0 0 0 0 exosome 0 0.438718593836532 0 0 hPsi_site_6498 iPseU_CNN:0;iRNA_PseU:0 6499 chr4 151141909 151141909 1 + G T BLCA 151141909 + 151141889 151141929 41 TAAACGGTGGACCTGAGCTTGACCGTTGCATAAGTCCTGAA TAAACGGTGGACCTGAGCTTTACCGTTGCATAAGTCCTGAA Direct Gain 0 0.945829122050298 0 0.999967038631439 prediction 0.891658244100597 Functional Gain - DCLK2 ENSG00000170390 CDS Human protein_coding chr4:151141909 chr4:151141909 nonsynonymous SNV 0.948 1 21 hPsi_associated_SNPs_107539 0 0 0 0 3 Nucleus 0 0.438515304098182 0.999934077262878 0 hPsi_site_6499 iPseU_CNN:0.999934077262878;iRNA_PseU:0 6500 chr4 88584026 88584026 1 + G T COAD 88584026 + 88584006 88584046 41 TGGTGAGTGAGTCCAGGGGAGATAACCCCGACCCCACAACT TGGTGAGTGAGTCCAGGGGATATAACCCCGACCCCACAACT Direct Gain 0 0.945828823369555 0 0.966437935829163 prediction 0.891657646739111 Functional Gain - DMP1 ENSG00000152592 CDS Human protein_coding chr4:88584026 chr4:88584026 nonsynonymous SNV 0.461 4 21 hPsi_associated_SNPs_107540 0 0 0 0 0 exosome 0 0.438718521748329 0.932875871658326 0 hPsi_site_6500 iPseU_CNN:0.932875871658326;iRNA_PseU:0 6501 chr1 223176710 223176710 1 + G A LUSC 223176710 - 223176690 223176730 41 AGAAGATACCGCTCATGCAGCACAACAACTGCTGGAAGCCA AGAAGATACCGCTCATGCAGTACAACAACTGCTGGAAGCCA Direct Gain 0 0.945824357274698 0 0.041538804769516 prediction 0.891648714549396 Functional Gain - DISP1 ENSG00000154309 CDS Human protein_coding chr1:223176710 chr1:223176710 synonymous SNV . 0 21 hPsi_associated_SNPs_107541 0 0 0 0 0 Cytosol 0 0.438718477887047 0 0 hPsi_site_6501 iPseU_CNN:0;iRNA_PseU:0 6502 chr17 42837133 42837133 1 + C T rs62636629 42837133 + 42837113 42837153 41 GGAGCTCTGCGATGGGGGGGCTTACCCCAGCTGGGAGGCCC GGAGCTCTGCGATGGGGGGGTTTACCCCAGCTGGGAGGCCC Direct Gain 0 0.94582364459078 0 0.700364470481873 prediction 0.891647289181561 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42837133 chr17:42837133 synonymous SNV . 0 21 hPsi_associated_SNPs_107542 0 0 0 0 1 chromatin 0 0.438718592995102 0.400728940963746 0 hPsi_site_6502 iPseU_CNN:0.400728940963746;iRNA_PseU:0 6503 chrX 147026458 147026458 1 + C T THCA 147026458 + 147026438 147026478 41 AGACGAACTCAGTGATTGGTCATTAGCTCCAACAGAGGAAG AGACGAACTCAGTGATTGGTTATTAGCTCCAACAGAGGAAG Direct Gain 0 0.945823574725187 0 0.963992357254028 prediction 0.891647149450373 Functional Gain - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147026458 chrX:147026458 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107543 0 0 1 0 1 Cytosol 0 0.429285227693422 0.927984714508056 0 hPsi_site_6503 iPseU_CNN:0.927984714508056;iRNA_PseU:0 6504 chr4 71024230 71024230 1 + C A COAD 71024230 - 71024210 71024250 41 GGAAAACCACGGATGTGATAGACATAGGGGAATCCAGGAGA GGAAAACCACGGATGTGATATACATAGGGGAATCCAGGAGA Direct Gain 0 0.945822228501065 0 0.396914571523666 prediction 0.89164445700213 Functional Gain - PRR27 ENSG00000187533 CDS Human protein_coding chr4:71024230 chr4:71024230 synonymous SNV . 0 21 hPsi_associated_SNPs_107544 0 0 0 0 0 unknown 0 0.438718593100211 0 0 hPsi_site_6504 iPseU_CNN:0;iRNA_PseU:0 6505 chr3 53779725 53779725 1 + C T SKCM 53779725 + 53779705 53779745 41 GTCACCACCCTCCTGCAGTTCATGTTTGCCTGTATCGGGGT GTCACCACCCTCCTGCAGTTTATGTTTGCCTGTATCGGGGT Direct Gain 0 0.945819718446193 0 0.999783992767334 prediction 0.891639436892387 Functional Gain - CACNA1D ENSG00000157388 CDS Human protein_coding chr3:53779725 chr3:53779725 synonymous SNV . 0 21 hPsi_associated_SNPs_107545 0 0 0 0 2 Endoplasmic reticulum 0 0.438718519705469 0.999567985534668 0 hPsi_site_6505 iPseU_CNN:0.999567985534668;iRNA_PseU:0 6506 chr9 84562744 84562744 1 + G A UCEC 84562744 - 84562724 84562764 41 TGTGGGATTTCTCAGGAAGACATATTGTCTGCTTGACTGAG TGTGGGATTTCTCAGGAAGATATATTGTCTGCTTGACTGAG Direct Gain 0 0.945819407871775 0 0.997044920921326 prediction 0.891638815743549 Functional Gain - SPATA31D3 ENSG00000186788 ncRNA_exonic Human protein_coding chr9:84562744 chr9:84562744 . . 0 21 hPsi_associated_SNPs_107546 0 0 0 0 0 exosome 0 0.438664302948993 0.994089841842652 0 hPsi_site_6506 iPseU_CNN:0.994089841842652;iRNA_PseU:0 6507 chr16 11097026 11097026 1 + G A SKCM 11097026 - 11097006 11097046 41 ACGTTTTTGTAGTTGGGTCTCTTTTGCACCCGCCTCTTGCC ACGTTTTTGTAGTTGGGTCTTTTTTGCACCCGCCTCTTGCC Direct Gain 0 0.945818440639039 0 0.971762299537659 prediction 0.891636881278078 Functional Gain - CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11097026 chr16:11097026 synonymous SNV . 0 21 hPsi_associated_SNPs_107547 0 0 0 0 0 Cytosol 0 0.438718477735389 0.943524599075318 0 hPsi_site_6507 iPseU_CNN:0.943524599075318;iRNA_PseU:0 6508 chr16 69373951 69373951 1 + C T UCEC 69373951 + 69373931 69373971 41 CTGGTGGACCGGCCCGATGGCACCTACTGTTTCCGTCTGCA CTGGTGGACCGGCCCGATGGTACCTACTGTTTCCGTCTGCA Direct Gain 0 0.945814847879809 0 0.999991118907928 prediction 0.891629695759618 Functional Gain - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69373951 chr16:69373951 synonymous SNV . 0 21 hPsi_associated_SNPs_107548 0 0 1 0 2 Ribosome 0 0.438770140483045 0.999982237815856 0 hPsi_site_6508 iPseU_CNN:0.999982237815856;iRNA_PseU:0 6509 chr4 123188104 123188104 1 + G A ESCA 123188104 - 123188084 123188124 41 GCAAAAGACACCTTCTTGCTCTTTTGCCTTTTCTCTCTTTG GCAAAAGACACCTTCTTGCTTTTTTGCCTTTTCTCTCTTTG Direct Gain 0 0.945810141718347 0 0.838728666305542 prediction 0.891620283436695 Functional Gain - KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123188104 chr4:123188104 nonsynonymous SNV 0.996 0 21 hPsi_associated_SNPs_107549 0 0 0 0 0 Nucleus 0 0.438688536829032 0.677457332611084 0 hPsi_site_6509 iPseU_CNN:0.677457332611084;iRNA_PseU:0 6510 chr17 57287427 57287427 1 + G A SKCM 57287427 - 57287407 57287447 41 ATTAGAAGGTCTCGCAAGCTCACGGGACCAGCCATAGTGCA ATTAGAAGGTCTCGCAAGCTTACGGGACCAGCCATAGTGCA Direct Gain 0 0.945807411173351 0 0.961576402187347 prediction 0.891614822346703 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287427 chr17:57287427 synonymous SNV . 0 21 hPsi_associated_SNPs_107550 0 0 0 0 0 chromatin 0 0.438704046033395 0.923152804374694 0 hPsi_site_6510 iPseU_CNN:0.923152804374694;iRNA_PseU:0 6511 chr20 241638 241638 1 + G A rs73060596 241638 - 241618 241658 41 GTATACAAATGAATACTATTCATATGACGGAAGAGTATTTA GTATACAAATGAATACTATTTATATGACGGAAGAGTATTTA Direct Gain 0 0.945802352448522 0 0.0568965673446655 prediction 0.891604704897044 Functional Gain - DEFB132 ENSG00000186458 UTR3 Human protein_coding chr20:241638 chr20:241638 . . 0 21 hPsi_associated_SNPs_107551 0 0 0 0 0 unknown 0 0.438700974423133 0 0 hPsi_site_6511 iPseU_CNN:0;iRNA_PseU:0 6512 chr11 62105471 62105471 1 + C T SARC 62105471 + 62105451 62105491 41 TGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCC TGAATCCCATCGTAGTGGTCTACGGCGGCGGAGCCGGTCCC Direct Gain 0 0.945801476084403 0 0.9582799077034 prediction 0.891602952168805 Functional Gain - ASRGL1 ENSG00000162174 CDS Human protein_coding chr11:62105471 chr11:62105471 nonsynonymous SNV 0.990 5 21 hPsi_associated_SNPs_107552 0 0 1 0 1 Ribosome 0 0.438718592768399 0.9165598154068 0 hPsi_site_6512 iPseU_CNN:0.9165598154068;iRNA_PseU:0 6513 chr6 42643863 42643863 1 + G T UCEC 42643863 + 42643843 42643883 41 GGATCAGCCTTGGCACTGGAGACCTTCACATTTTCCATCTG GGATCAGCCTTGGCACTGGATACCTTCACATTTTCCATCTG Direct Gain 0 0.945801471559748 0 0.999521672725677 prediction 0.891602943119497 Functional Gain - UBR2 ENSG00000024048 CDS Human protein_coding chr6:42643863 chr6:42643863 nonsynonymous SNV 0.997 2 21 hPsi_associated_SNPs_107553 0 0 1 0 2 Cytosol 0 0.435239513597416 0.999043345451354 0 hPsi_site_6513 iPseU_CNN:0.999043345451354;iRNA_PseU:0 6514 chr13 93879733 93879733 1 + G T LGG 93879733 + 93879713 93879753 41 CCTTCTTGGATCGGGGCTGTGATTCTTCCCCTCTTGGGGCT CCTTCTTGGATCGGGGCTGTTATTCTTCCCCTCTTGGGGCT Direct Gain 0 0.945799550672273 0 0.97305428981781 prediction 0.891599101344545 Functional Gain - GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879733 chr13:93879733 synonymous SNV . 0 21 hPsi_associated_SNPs_107554 0 0 1 0 0 Ribosome 0 0.438718593003238 0.94610857963562 0 hPsi_site_6514 iPseU_CNN:0.94610857963562;iRNA_PseU:0 6515 chr9 4585514 4585514 1 + G T SARC 4585514 + 4585494 4585534 41 TCAATGGAGGCTTTGCAGTAGACAAGTCTGACACCATCTCA TCAATGGAGGCTTTGCAGTATACAAGTCTGACACCATCTCA Direct Gain 0 0.94579756178436 0 0.999994695186615 prediction 0.89159512356872 Functional Gain - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585514 chr9:4585514 nonsynonymous SNV 0.989 4 21 hPsi_associated_SNPs_107555 0 0 1 0 0 chromatin 0 0.4387188477713 0.99998939037323 0 hPsi_site_6515 iPseU_CNN:0.99998939037323;iRNA_PseU:0 6516 chr20 44640364 44640364 1 + C T BLCA 44640364 + 44640344 44640384 41 AACTACGACCGGGACAAGCTCTTCGGCTTCTGCCCGACCCG AACTACGACCGGGACAAGCTTTTCGGCTTCTGCCCGACCCG Direct Gain 0 0.945796529051181 0 0.971476912498474 prediction 0.891593058102362 Functional Gain - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44640364 chr20:44640364 synonymous SNV . 0 21 hPsi_associated_SNPs_107556 0 0 0 0 1 Endoplasmic reticulum 0 0.438718592995102 0.942953824996948 0 hPsi_site_6516 iPseU_CNN:0.942953824996948;iRNA_PseU:0 6517 chr10 106152114 106152114 1 + G A SKCM 106152114 - 106152094 106152134 41 TTTGCTATACAGATTTCTGTCTGATCTCACAGCTTCATATA TTTGCTATACAGATTTCTGTTTGATCTCACAGCTTCATATA Direct Gain 0 0.945791176180342 0 0.1456059217453 prediction 0.891582352360685 Functional Gain - CFAP58 ENSG00000120051 CDS Human protein_coding chr10:106152114 chr10:106152114 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_107557 0 0 0 0 0 nucleolus 0 0.436946681807613 0 0 hPsi_site_6517 iPseU_CNN:0;iRNA_PseU:0 6518 chr18 13641946 13641946 1 + G T rs4796991 13641946 + 13641926 13641966 41 GCTGACTGGGCTCCCGGAGCGAGGAGCGCCCCTGCGGGCCC GCTGACTGGGCTCCCGGAGCTAGGAGCGCCCCTGCGGGCCC Direct Gain 0 0.945786166168941 0 0.999933004379272 prediction 0.891572332337881 Functional Gain - LDLRAD4 ENSG00000168675 UTR5 Human protein_coding chr18:13641946 chr18:13641946 . . 0 21 hPsi_associated_SNPs_107558 0 0 0 0 0 Nucleus 0 0.438718572234488 0.999866008758544 0 hPsi_site_6518 iPseU_CNN:0.999866008758544;iRNA_PseU:0 6519 chrX 70342121 70342121 1 + C T UCEC 70342121 + 70342101 70342141 41 GATAGCAGAATTAAGACCGGCTCACCACTTGACCACTTGCC GATAGCAGAATTAAGACCGGTTCACCACTTGACCACTTGCC Direct Gain 0 0.945784982696476 0 0.996757745742798 prediction 0.891569965392952 Functional Gain - MED12 ENSG00000184634 CDS Human protein_coding chrX:70342121 chrX:70342121 synonymous SNV . 0 21 hPsi_associated_SNPs_107559 0 0 0 0 2 Cytosol 0 0.438718382653472 0.993515491485596 0 hPsi_site_6519 iPseU_CNN:0.993515491485596;iRNA_PseU:0 6520 chr1 171504575 171504575 1 + C A OV 171504575 - 171504555 171504595 41 GTCTTGTCTAGTGAAAACGGGTTCCTCCTCTGCTCAAAGAA GTCTTGTCTAGTGAAAACGGTTTCCTCCTCTGCTCAAAGAA Direct Gain 0 0.945784964128867 0 0.999809503555298 prediction 0.891569928257735 Functional Gain - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171504575 chr1:171504575 nonsynonymous SNV 0.566 1 21 hPsi_associated_SNPs_107560 0 0 0 0 0 Cytosol 0 0.438721071330109 0.999619007110596 0 hPsi_site_6520 iPseU_CNN:0.999619007110596;iRNA_PseU:0 6521 chr1 156348062 156348062 1 + C A OV 156348062 - 156348042 156348082 41 CAAAGGTGTGGATAGTCATGGAGCCTCCGGCATCTCTCACC CAAAGGTGTGGATAGTCATGTAGCCTCCGGCATCTCTCACC Direct Gain 0 0.945774300368231 0 0.998505055904388 prediction 0.891548600736461 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348062 chr1:156348062 nonsynonymous SNV 0.980 3 21 hPsi_associated_SNPs_107561 0 0 0 0 0 Cytosol 0 0.438718804857399 0.997010111808776 0 hPsi_site_6521 iPseU_CNN:0.997010111808776;iRNA_PseU:0 6522 chr7 27831739 27831739 1 + G A UCEC 27831739 - 27831719 27831759 41 CAGGTCTGCCATCGTTCTGTCTCGTACGTTGACAGCATCAC CAGGTCTGCCATCGTTCTGTTTCGTACGTTGACAGCATCAC Direct Gain 0 0.945774204799526 0 0.999300599098206 prediction 0.891548409599051 Functional Gain - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27831739 chr7:27831739 nonsynonymous SNV 0.990 4 21 hPsi_associated_SNPs_107562 0 0 0 0 0 Ribosome 0 0.43822971610707 0.998601198196412 0 hPsi_site_6522 iPseU_CNN:0.998601198196412;iRNA_PseU:0 6523 chr19 47506841 47506841 1 + C T rs553539748 47506841 + 47506821 47506861 41 CACGGCACACATTTACTCTGCATTGTCCCCGTCTTTCCCAT CACGGCACACATTTACTCTGTATTGTCCCCGTCTTTCCCAT Direct Gain 0 0.945773777803034 0 0.382716596126556 prediction 0.891547555606068 Functional Gain - ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506841 chr19:47506841 . . 0 21 hPsi_associated_SNPs_107563 0 0 1 0 0 Ribosome 0 0.434725646352844 0 0 hPsi_site_6523 iPseU_CNN:0;iRNA_PseU:0 6524 chr15 20495377 20495377 1 + G A SKCM 20495377 - 20495357 20495397 41 AGATCTTGAAACTTTCTCTTCATGTCTTCATCCTGTGAGGG AGATCTTGAAACTTTCTCTTTATGTCTTCATCCTGTGAGGG Direct Gain 0 0.945766379238986 0 0.407240241765976 prediction 0.891532758477971 Functional Gain - CHEK2P2 ENSG00000259156 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:20495377 chr15:20495377 . . 0 21 hPsi_associated_SNPs_107564 0 0 0 0 0 unknown 0 0.438733803391443 0 0 hPsi_site_6524 iPseU_CNN:0;iRNA_PseU:0 6525 chr1 40525085 40525085 1 + C T BLCA 40525085 + 40525065 40525105 41 GCCGCCTGGAGGCAGTATCTCATACCTCTGACATGCACCGT GCCGCCTGGAGGCAGTATCTTATACCTCTGACATGCACCGT Direct Gain 0 0.945761820432103 0 0.999631941318512 prediction 0.891523640864206 Functional Gain - CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525085 chr1:40525085 nonsynonymous SNV 0.987 0 21 hPsi_associated_SNPs_107565 0 0 1 2 3 Ribosome 0 0.438721122405904 0.999263882637024 0 hPsi_site_6525 iPseU_CNN:0.999263882637024;iRNA_PseU:0 6526 chrX 53115021 53115021 1 + G A LUSC 53115021 - 53115001 53115041 41 GTTGGGGACCTCATTGTGGTCAGGATTCTCGCTGTCGCAGA GTTGGGGACCTCATTGTGGTTAGGATTCTCGCTGTCGCAGA Direct Gain 0 0.945757500227965 0 0.678315460681915 prediction 0.89151500045593 Functional Gain - TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53115021 chrX:53115021 nonsynonymous SNV 0.495 1 21 hPsi_associated_SNPs_107566 0 0 0 0 0 chromatin 0 0.438800097335822 0.35663092136383 0 hPsi_site_6526 iPseU_CNN:0.35663092136383;iRNA_PseU:0 6527 chr6 29894406 29894406 1 + C A rs114028743 29894406 - 29894386 29894426 41 GGAGGGGCTGAGACCCGTCCGACCCTCCTCCTTGCGCTGCT GGAGGGGCTGAGACCCGTCCTACCCTCCTCCTTGCGCTGCT Direct Gain 0 0.94575679324561 0 0.220090210437775 prediction 0.89151358649122 Functional Gain - HCG4B ENSG00000227262 ncRNA_exonic Human unprocessed_pseudogene chr6:29894406 chr6:29894406 . . 0 21 hPsi_associated_SNPs_107567 0 0 0 0 0 unknown 0 0.438717322459786 0 0 hPsi_site_6527 iPseU_CNN:0;iRNA_PseU:0 6528 chr22 32242914 32242914 1 + C T BLCA 32242914 + 32242894 32242934 41 AGTGGGGAAGAAGGGAACCTCAGCTCTCTCTGCCCTGTTGG AGTGGGGAAGAAGGGAACCTTAGCTCTCTCTGCCCTGTTGG Direct Gain 0 0.945754966821917 0 0.996528744697571 prediction 0.891509933643834 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32242914 chr22:32242914 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_107568 0 0 1 0 2 chromatin 0 0.438718595111231 0.993057489395142 0 hPsi_site_6528 iPseU_CNN:0.993057489395142;iRNA_PseU:0 6529 chr7 150554701 150554701 1 + C T LUSC 150554701 + 150554681 150554721 41 GGCTGGGGCCTGGGCAGCGTCACTCATGAGTTAGCCCCCGG GGCTGGGGCCTGGGCAGCGTTACTCATGAGTTAGCCCCCGG Direct Gain 0 0.945753291722824 0 0.97420597076416 prediction 0.891506583445649 Functional Gain - AOC1 ENSG00000002726 CDS Human protein_coding chr7:150554701 chr7:150554701 synonymous SNV . 0 21 hPsi_associated_SNPs_107569 0 0 0 0 0 exosome 0 0.438717992393422 0.94841194152832 0 hPsi_site_6529 iPseU_CNN:0.94841194152832;iRNA_PseU:0 6530 chr6 74073628 74073628 1 + G T rs181090656 74073628 + 74073608 74073648 41 AGCCAGTCAGGGGTTAAAGTGAAAGCCCGTATTTCCGCCCA AGCCAGTCAGGGGTTAAAGTTAAAGCCCGTATTTCCGCCCA Direct Gain 0 0.945748815361707 0 0.999972224235535 prediction 0.891497630723413 Functional Gain - KHDC3L ENSG00000203908 UTR3 Human protein_coding chr6:74073628 chr6:74073628 . . 0 21 hPsi_associated_SNPs_107570 0 0 0 0 0 unknown 0 0.438718591181799 0.99994444847107 0 hPsi_site_6530 iPseU_CNN:0.99994444847107;iRNA_PseU:0 6531 chr7 33427697 33427697 1 + G T UCEC 33427697 + 33427677 33427717 41 GGCTACTAGCAAGATTCAAAGATAAAACTCCTGCCCCTCTT GGCTACTAGCAAGATTCAAATATAAAACTCCTGCCCCTCTT Direct Gain 0 0.945748221630492 0 0.995331406593323 prediction 0.891496443260983 Functional Gain - BBS9 ENSG00000122507 CDS Human protein_coding chr7:33427697 chr7:33427697 nonsynonymous SNV 0.963 4 21 hPsi_associated_SNPs_107571 0 0 0 0 2 cytosol 0 0.438718592995102 0.990662813186646 0 hPsi_site_6531 iPseU_CNN:0.990662813186646;iRNA_PseU:0 6532 chr19 57037678 57037678 1 + G A rs572322731 57037678 - 57037658 57037698 41 GAGTGCACCATTCCTCATGGCACAGTCCCTCATGGCTTCCC GAGTGCACCATTCCTCATGGTACAGTCCCTCATGGCTTCCC Direct Gain 0 0.945747940021827 0 0.999943494796753 prediction 0.891495880043653 Functional Gain - ZNF471 ENSG00000196263 UTR3 Human protein_coding chr19:57037678 chr19:57037678 . . 0 21 hPsi_associated_SNPs_107572 0 0 0 0 0 exosome 0 0.438757232545964 0.999886989593506 0 hPsi_site_6532 iPseU_CNN:0.999886989593506;iRNA_PseU:0 6533 chr2 192543377 192543377 1 + G T UCEC 192543377 + 192543357 192543397 41 ACCCACTTATTTTTATAAGAGATATTAAGCCCGGACTGAAA ACCCACTTATTTTTATAAGATATATTAAGCCCGGACTGAAA Direct Gain 0 0.945742680428525 0 2.89082527160645e-05 prediction 0.89148536085705 Functional Gain - NABP1 ENSG00000173559 CDS Human protein_coding chr2:192543377 chr2:192543377 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107573 0 0 1 0 1 chromatin 0 0.438752831924953 0 0 hPsi_site_6533 iPseU_CNN:0;iRNA_PseU:0 6534 chr8 35616925 35616925 1 + C T SKCM 35616925 + 35616905 35616945 41 AAGGGAATACCTTTAGTCTTCAGATTTCTGTCCTTGATATT AAGGGAATACCTTTAGTCTTTAGATTTCTGTCCTTGATATT Direct Gain 0 0.945742385792743 0 0.165948480367661 prediction 0.891484771585485 Functional Gain - UNC5D ENSG00000156687 CDS Human protein_coding chr8:35616925 chr8:35616925 stopgain 0.995 1 21 hPsi_associated_SNPs_107574 0 0 0 0 2 chromatin 0 0.438708956664688 0 0 hPsi_site_6534 iPseU_CNN:0;iRNA_PseU:0 6535 chr11 56043681 56043681 1 + C A UCEC 56043681 - 56043661 56043701 41 AGAGGAGGCATATTACAAAAGACATGCCTAATTTCATTGGA AGAGGAGGCATATTACAAAATACATGCCTAATTTCATTGGA Direct Gain 0 0.945741501642095 0 0.895544648170471 prediction 0.89148300328419 Functional Gain - OR5T1 ENSG00000181698 CDS Human protein_coding chr11:56043681 chr11:56043681 synonymous SNV . 0 21 hPsi_associated_SNPs_107575 0 0 0 0 0 unknown 0 0.438681522104168 0.791089296340942 0 hPsi_site_6535 iPseU_CNN:0.791089296340942;iRNA_PseU:0 6536 chr3 12859276 12859276 1 + G A BLCA 12859276 - 12859256 12859296 41 CACCCCCCGGGTGCCCTCCTCAGCACCCTCGCAGCGCTGGA CACCCCCCGGGTGCCCTCCTTAGCACCCTCGCAGCGCTGGA Direct Gain 0 0.945738983600122 0 0.966372907161713 prediction 0.891477967200243 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12859276 chr3:12859276 nonsynonymous SNV 0.509 4 21 hPsi_associated_SNPs_107576 0 0 0 0 0 chromatin 0 0.437451229738 0.932745814323426 0 hPsi_site_6536 iPseU_CNN:0.932745814323426;iRNA_PseU:0 6537 chr5 169098097 169098097 1 + C A LUSC 169098097 - 169098077 169098117 41 AGAGGAATTTCTGCAGGAATGATGTTCTCAGTATTTCTATT AGAGGAATTTCTGCAGGAATTATGTTCTCAGTATTTCTATT Direct Gain 0 0.945735078322061 0 0.983753085136414 prediction 0.891470156644123 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169098097 chr5:169098097 synonymous SNV . 0 21 hPsi_associated_SNPs_107577 0 0 0 0 0 Cytosol 0 0.438766274662794 0.967506170272828 0 hPsi_site_6537 iPseU_CNN:0.967506170272828;iRNA_PseU:0 6538 chr3 12458304 12458304 1 + C A LUAD 12458304 - 12458284 12458324 41 TGGCAGCCCTGAAAGATGCGGATGGCCACCTCTTTGCTCTG TGGCAGCCCTGAAAGATGCGTATGGCCACCTCTTTGCTCTG Direct Gain 0 0.945732124598457 0 0.990800499916077 prediction 0.891464249196914 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12458304 chr3:12458304 synonymous SNV . 0 21 hPsi_associated_SNPs_107578 0 0 0 0 0 Cytosol 0 0.438718595066094 0.981600999832154 0 hPsi_site_6538 iPseU_CNN:0.981600999832154;iRNA_PseU:0 6539 chrX 69646560 69646560 1 + G A ACC 69646560 - 69646540 69646580 41 ATACGGTAGAAGGTATCAGCCACAGGCCAGGCCAGGAGGGC ATACGGTAGAAGGTATCAGCTACAGGCCAGGCCAGGAGGGC Direct Gain 0 0.945732122447007 0 0.999604344367981 prediction 0.891464244894014 Functional Gain - GDPD2 ENSG00000130055 CDS Human protein_coding chrX:69646560 chrX:69646560 synonymous SNV . 0 21 hPsi_associated_SNPs_107579 0 0 0 0 0 exosome 0 0.438703579364854 0.999208688735962 0 hPsi_site_6539 iPseU_CNN:0.999208688735962;iRNA_PseU:0 6540 chr4 20469433 20469433 1 + G A UCEC 20469433 - 20469413 20469453 41 TACTTACAAATTTTTTATGTCAACTGCCCCACGGAAAGCTT TACTTACAAATTTTTTATGTTAACTGCCCCACGGAAAGCTT Direct Gain 0 0.945730356699514 0 0.999785244464874 prediction 0.891460713399027 Functional Gain - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20469433 chr4:20469433 nonsynonymous SNV 0.999 1 21 hPsi_associated_SNPs_107580 0 0 0 0 0 Ribosome 0 0.438723009462578 0.999570488929748 0 hPsi_site_6540 iPseU_CNN:0.999570488929748;iRNA_PseU:0 6541 chr7 141896544 141896544 1 + G T COAD 141896544 + 141896524 141896564 41 TTTGGAGATGCTGAATATGAGATGTGTGTTCGCTGGATGCA TTTGGAGATGCTGAATATGATATGTGTGTTCGCTGGATGCA Direct Gain 0 0.945728346328344 0 0.687515556812286 prediction 0.891456692656688 Functional Gain - MGAM2 ENSG00000257743 CDS Human protein_coding chr7:141896544 chr7:141896544 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107581 0 0 0 0 1 exosome 0 0.442357435579248 0.375031113624572 0 hPsi_site_6541 iPseU_CNN:0.375031113624572;iRNA_PseU:0 6542 chrX 41586833 41586833 1 + G A rs146786893 41586833 - 41586813 41586853 41 TCTGCCGATTGTAGCATAGGCTCTCTTCTCCTTCTGTAGCC TCTGCCGATTGTAGCATAGGTTCTCTTCTCCTTCTGTAGCC Direct Gain 0 0.94572616279463 0 0.999994039535522 prediction 0.89145232558926 Functional Gain - GPR82 ENSG00000171657 CDS Human protein_coding chrX:41586833 chrX:41586833 nonsynonymous SNV 0.031 0 21 hPsi_associated_SNPs_107582 1 0 0 0 0 nucleus 0 0.43871554543319 0.999988079071044 0 hPsi_site_6542 iPseU_CNN:0.999988079071044;iRNA_PseU:0 6543 chr7 155255124 155255124 1 + C T UCEC 155255124 + 155255104 155255144 41 AAAGAGGACAAGCGGCCGCGCACGGCCTTTACCGCCGAGCA AAAGAGGACAAGCGGCCGCGTACGGCCTTTACCGCCGAGCA Direct Gain 0 0.945723653723478 0 0.998550653457642 prediction 0.891447307446956 Functional Gain - EN2 ENSG00000164778 CDS Human protein_coding chr7:155255124 chr7:155255124 synonymous SNV . 0 21 hPsi_associated_SNPs_107583 0 0 1 0 1 Cytosol 0 0.438718592916026 0.997101306915284 0 hPsi_site_6543 iPseU_CNN:0.997101306915284;iRNA_PseU:0 6544 chr11 71806065 71806065 1 + G A OV 71806065 - 71806045 71806085 41 GGAAGGACAGCCAGCTTATTCACCTCCCCCAGGCGCTGGAT GGAAGGACAGCCAGCTTATTTACCTCCCCCAGGCGCTGGAT Direct Gain 0 0.945718185094233 0 0.999995589256287 prediction 0.891436370188466 Functional Gain - LRTOMT ENSG00000184154 CDS Human protein_coding chr11:71806065 chr11:71806065 synonymous SNV . 0 21 hPsi_associated_SNPs_107584 0 0 0 0 0 Cytosol 0 0.438718592995102 0.999991178512574 0 hPsi_site_6544 iPseU_CNN:0.999991178512574;iRNA_PseU:0 6545 chr1 180056829 180056829 1 + C T LGG 180056829 + 180056809 180056849 41 GCTTCTGAAAAACCCAAGATCAAACCCCTCACACCACTACA GCTTCTGAAAAACCCAAGATTAAACCCCTCACACCACTACA Direct Gain 0 0.945715054475915 0 0.999180436134338 prediction 0.89143010895183 Functional Gain - CEP350 ENSG00000135837 CDS Human protein_coding chr1:180056829 chr1:180056829 synonymous SNV . 0 21 hPsi_associated_SNPs_107585 0 0 1 0 1 Nucleus 0 0.438718593011744 0.998360872268676 0 hPsi_site_6545 iPseU_CNN:0.998360872268676;iRNA_PseU:0 6546 chr8 2000409 2000409 1 + G A rs35985218 2000409 - 2000389 2000429 41 GCTTCTGTTCTCCTGCTCCTCATCTTCCTGCGTGCTCACTC GCTTCTGTTCTCCTGCTCCTTATCTTCCTGCGTGCTCACTC Direct Gain 0 0.945713818775632 0 0.879211843013763 prediction 0.891427637551265 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2000409 chr8:2000409 nonsynonymous SNV 0.033 0 21 hPsi_associated_SNPs_107586 0 0 0 0 0 exosome 0 0.438753797221056 0.758423686027526 0 hPsi_site_6546 iPseU_CNN:0.758423686027526;iRNA_PseU:0 6547 chr8 94935140 94935140 1 + C T LUSC 94935140 + 94935120 94935160 41 ATGTGGATGGTGTTGACCTTCATGTGGCCAATACTGGCGAT ATGTGGATGGTGTTGACCTTTATGTGGCCAATACTGGCGAT Direct Gain 0 0.945713248804294 0 0.973449230194092 prediction 0.891426497608589 Functional Gain - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935140 chr8:94935140 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107587 0 0 0 0 0 Ribosome 0 0.438718592930839 0.946898460388184 0 hPsi_site_6547 iPseU_CNN:0.946898460388184;iRNA_PseU:0 6548 chr7 143771954 143771954 1 + A T SKCM 143771954 + 143771934 143771974 41 GGAGCCTTCTTTTCCACTGTAATATCTTATGTTCATATTCT GGAGCCTTCTTTTCCACTGTTATATCTTATGTTCATATTCT Direct Gain 0 0.945710382867477 0 0.00908476114273071 prediction 0.891420765734955 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771954 chr7:143771954 synonymous SNV . 0 21 hPsi_associated_SNPs_107588 0 0 0 0 0 unknown 0 0.438717798343239 0 0 hPsi_site_6548 iPseU_CNN:0;iRNA_PseU:0 6549 chr3 189612226 189612226 1 + G A STAD 189612226 - 189612206 189612246 41 ATCCATGTCAAAGTTGAAGTCATTCCACTCATCTCGGGGTG ATCCATGTCAAAGTTGAAGTTATTCCACTCATCTCGGGGTG Direct Gain 0 0.945710051432505 0 0.999990463256836 prediction 0.891420102865011 Functional Gain - TP63 ENSG00000073282 CDS Human protein_coding chr3:189612226 chr3:189612226 nonsynonymous SNV 0.997 5 21 hPsi_associated_SNPs_107589 0 0 0 0 0 chromatin 0 0.438716576135152 0.999980926513672 0 hPsi_site_6549 iPseU_CNN:0.999980926513672;iRNA_PseU:0 6550 chr11 66413687 66413687 1 + G T rs559106649 66413687 + 66413667 66413707 41 CCTCTCCTGCCCATTTTCCTGTTCTTCTGTCCTTCAATACT CCTCTCCTGCCCATTTTCCTTTTCTTCTGTCCTTCAATACT Direct Gain 0 0.945708372673304 0 0.00718304514884949 prediction 0.891416745346609 Functional Gain - RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 UTR3 Human other chr11:66413687 chr11:66413687 . . 0 21 hPsi_associated_SNPs_107590 0 0 1 1 0 unknown 0 0.43871846099784 0 0 hPsi_site_6550 iPseU_CNN:0;iRNA_PseU:0 6551 chr3 109128927 109128927 1 + G A SARC 109128927 - 109128907 109128947 41 AGGAAGCCTCTATACCATGGCTTGTACAAAGCGGACTGCCT AGGAAGCCTCTATACCATGGTTTGTACAAAGCGGACTGCCT Direct Gain 0 0.945704972415048 0 0.975187063217163 prediction 0.891409944830096 Functional Gain - LINC01205 ENSG00000228980;ENSG00000230618 ncRNA_exonic Human other chr3:109128927 chr3:109128927 . . 0 21 hPsi_associated_SNPs_107591 0 0 0 0 0 unknown 0 0.438718590969759 0.950374126434326 0 hPsi_site_6551 iPseU_CNN:0.950374126434326;iRNA_PseU:0 6552 chr19 58357400 58357400 1 + C T rs567563143 58357400 + 58357380 58357420 41 ATTTGAGCTGTAGGATAAGTCTTGAATTTTATTATAATCCC ATTTGAGCTGTAGGATAAGTTTTGAATTTTATTATAATCCC Direct Gain 0 0.945704407619632 0 0.671485483646393 prediction 0.891408815239264 Functional Gain - ZNF587B ENSG00000269343 UTR3 Human protein_coding chr19:58357400 chr19:58357400 . . 0 21 hPsi_associated_SNPs_107592 0 0 1 0 0 cytosol 0 0.438719149091906 0.342970967292786 0 hPsi_site_6552 iPseU_CNN:0.342970967292786;iRNA_PseU:0 6553 chr16 15781088 15781088 1 + C T rs527572940 15781088 + 15781068 15781108 41 TGCCCCAGAAGGTTAAGGGACTTGGCCCACTCTGTGGCATC TGCCCCAGAAGGTTAAGGGATTTGGCCCACTCTGTGGCATC Direct Gain 0 0.945704293142972 0 0.906672120094299 prediction 0.891408586285944 Functional Gain - NDE1 ENSG00000072864 intronic Human protein_coding chr16:15781088 chr16:15781088 . . 0 21 hPsi_associated_SNPs_107593 0 0 0 0 0 chromatin 0 0.43871859375563 0.813344240188598 0 hPsi_site_6553 iPseU_CNN:0.813344240188598;iRNA_PseU:0 6554 chr9 36583692 36583692 1 + G T UCEC 36583692 + 36583672 36583712 41 TGGTAGCTATAAAAATCATGGATAAAAACACACTAGGGGTA TGGTAGCTATAAAAATCATGTATAAAAACACACTAGGGGTA Direct Gain 0 0.945702418737387 0 0.966018676757812 prediction 0.891404837474775 Functional Gain - MELK ENSG00000165304 CDS Human protein_coding chr9:36583692 chr9:36583692 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107594 0 0 1 0 2 chromatin 0 0.438719678603045 0.932037353515624 0 hPsi_site_6554 iPseU_CNN:0.932037353515624;iRNA_PseU:0 6555 chr5 5232517 5232517 1 + G T LUSC 5232517 + 5232497 5232537 41 AGTGTGTGAAATATGGTGATGAAGGCCCCAAGCCCACCCAT AGTGTGTGAAATATGGTGATTAAGGCCCCAAGCCCACCCAT Direct Gain 0 0.945700962861867 0 0.988152027130127 prediction 0.891401925723734 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5232517 chr5:5232517 stopgain 1.000 1 21 hPsi_associated_SNPs_107595 0 0 0 0 1 exosome 0 0.438718587955781 0.976304054260254 0 hPsi_site_6555 iPseU_CNN:0.976304054260254;iRNA_PseU:0 6556 chr10 21805754 21805754 1 + C T COAD 21805754 + 21805734 21805774 41 GGTGGTGGTGCGGAGGCGGGCAGAAGCCGTTGACCAGATGA GGTGGTGGTGCGGAGGCGGGTAGAAGCCGTTGACCAGATGA Direct Gain 0 0.945696414900169 0 0.171221971511841 prediction 0.891392829800338 Functional Gain - SKIDA1 ENSG00000180592 CDS Human protein_coding chr10:21805754 chr10:21805754 nonsynonymous SNV 0.977 0 21 hPsi_associated_SNPs_107596 0 0 0 0 0 Nucleus 0 0.438717231527228 0 0 hPsi_site_6556 iPseU_CNN:0;iRNA_PseU:0 6557 chr6 31431740 31431740 1 + C T LUSC 31431740 + 31431720 31431760 41 GAGGAGGGGACTCCTCTTCTCACCCGCTGGTCTCTGGACAC GAGGAGGGGACTCCTCTTCTTACCCGCTGGTCTCTGGACAC Direct Gain 0 0.94569578519173 0 0.278050184249878 prediction 0.89139157038346 Functional Gain - HCP5 ENSG00000206337 ncRNA_exonic Human sense_overlapping chr6:31431740 chr6:31431740 . . 0 21 hPsi_associated_SNPs_107597 0 0 0 0 0 unknown 0 0.438707922006934 0 0 hPsi_site_6557 iPseU_CNN:0;iRNA_PseU:0 6558 chr10 26501385 26501385 1 + G A rs72787376 26501385 - 26501365 26501405 41 AGCAAGCTTGAGATGAAATACATCTTCGAAATTCTCCCCAC AGCAAGCTTGAGATGAAATATATCTTCGAAATTCTCCCCAC Direct Gain 0 0.945688198547804 0 0.519924640655518 prediction 0.891376397095608 Functional Gain - MYO3A ENSG00000095777 UTR3 Human protein_coding chr10:26501385 chr10:26501385 . . 0 21 hPsi_associated_SNPs_107598 1 0 0 0 0 exosome 0 0.438718778863397 0.039849281311036 0 hPsi_site_6558 iPseU_CNN:0.039849281311036;iRNA_PseU:0 6559 chr2 46607330 46607330 1 + C A rs138633485 46607330 - 46607310 46607350 41 ACCGGCAAAGAGGCAAGGGGGTTGGTACGACCTCACAAACA ACCGGCAAAGAGGCAAGGGGTTTGGTACGACCTCACAAACA Direct Gain 0 0.945687317398257 0 0.194520443677902 prediction 0.891374634796515 Functional Gain - EPAS1 ENSG00000116016 intronic Human protein_coding chr2:46607330 chr2:46607330 . . 0 21 hPsi_associated_SNPs_107599 0 0 0 0 0 Cytosol 0 0.438753485450485 0 0 hPsi_site_6559 iPseU_CNN:0;iRNA_PseU:0 6560 chr18 10468508 10468508 1 + C T UCEC 10468508 + 10468488 10468528 41 CCTTCATCCAGACAGCAGGTCTCATCCTAGGTCCTTAGAGA CCTTCATCCAGACAGCAGGTTTCATCCTAGGTCCTTAGAGA Direct Gain 0 0.945687035762463 0 0.939488887786865 prediction 0.891374071524926 Functional Gain - APCDD1 ENSG00000154856 CDS Human protein_coding chr18:10468508 chr18:10468508 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_107600 0 0 0 0 1 Cytosol 0 0.438724377800751 0.87897777557373 0 hPsi_site_6560 iPseU_CNN:0.87897777557373;iRNA_PseU:0 6561 chr9 125424369 125424369 1 + C T SKCM 125424369 + 125424349 125424389 41 GCCATTGACCGCTATGTGGCCATATGTAATCCCTTCCACTA GCCATTGACCGCTATGTGGCTATATGTAATCCCTTCCACTA Direct Gain 0 0.945684793620309 0 0.211352229118347 prediction 0.891369587240619 Functional Gain - OR1L1 ENSG00000173679 CDS Human protein_coding chr9:125424369 chr9:125424369 synonymous SNV . 0 21 hPsi_associated_SNPs_107601 0 0 0 0 0 unknown 0 0.438718611704125 0 0 hPsi_site_6561 iPseU_CNN:0;iRNA_PseU:0 6562 chr12 51072899 51072899 1 + C A rs554597674 51072899 - 51072879 51072919 41 GTAATGTTAAAACATCTATGGATGTACAAAGTCTCTCTTCT GTAATGTTAAAACATCTATGTATGTACAAAGTCTCTCTTCT Direct Gain 0 0.945680009451293 0 0.166997492313385 prediction 0.891360018902586 Functional Gain - DIP2B ENSG00000066084 intronic Human protein_coding chr12:51072899 chr12:51072899 . . 0 21 hPsi_associated_SNPs_107602 0 0 0 0 0 Nucleus 0 0.438729791839574 0 0 hPsi_site_6562 iPseU_CNN:0;iRNA_PseU:0 6563 chr1 12065863 12065863 1 + G A OV 12065863 - 12065843 12065883 41 GAAGTCAGCACACAGCTTGTCACAGTTTAGGTCATAGTTGA GAAGTCAGCACACAGCTTGTTACAGTTTAGGTCATAGTTGA Direct Gain 0 0.945662232571606 0 0.999956130981445 prediction 0.891324465143211 Functional Gain - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12065863 chr1:12065863 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107603 0 0 0 0 0 Ribosome 0 0.438724512303258 0.99991226196289 0 hPsi_site_6563 iPseU_CNN:0.99991226196289;iRNA_PseU:0 6564 chr6 158923821 158923821 1 + C T LUSC 158923821 + 158923801 158923841 41 ACCTGCAGTCAGTGCAGTGGCACAGGGCCCAGCTCACAGCC ACCTGCAGTCAGTGCAGTGGTACAGGGCCCAGCTCACAGCC Direct Gain 0 0.945657304323652 0 0.999959349632263 prediction 0.891314608647305 Functional Gain - TULP4 ENSG00000130338 CDS Human protein_coding chr6:158923821 chr6:158923821 synonymous SNV . 0 21 hPsi_associated_SNPs_107604 0 0 1 0 0 Ribosome 0 0.438687344401615 0.999918699264526 0 hPsi_site_6564 iPseU_CNN:0.999918699264526;iRNA_PseU:0 6565 chr12 123463887 123463887 1 + C T BLCA 123463887 + 123463867 123463907 41 ACGGTGGATGTATGTGCGCTCACCTGAGCTTGCTTGGGCCC ACGGTGGATGTATGTGCGCTTACCTGAGCTTGCTTGGGCCC Direct Gain 0 0.945653845947121 0 0.999801635742188 prediction 0.891307691894242 Functional Gain - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463887 chr12:123463887 synonymous SNV . 0 21 hPsi_associated_SNPs_107605 0 0 1 0 0 Cytosol 0 0.438718588769299 0.999603271484376 0 hPsi_site_6565 iPseU_CNN:0.999603271484376;iRNA_PseU:0 6566 chr11 59282551 59282551 1 + C T BLCA 59282551 + 59282531 59282571 41 TTACCTGTGAATCTCACCTTCATACGCCCATGTACTTCCTG TTACCTGTGAATCTCACCTTTATACGCCCATGTACTTCCTG Direct Gain 0 0.945651289001795 0 0.999999403953552 prediction 0.89130257800359 Functional Gain - OR4D9 ENSG00000172742 CDS Human protein_coding chr11:59282551 chr11:59282551 nonsynonymous SNV 0.129 2 21 hPsi_associated_SNPs_107606 0 0 0 0 0 unknown 0 0.438684153497721 0.999998807907104 0 hPsi_site_6566 iPseU_CNN:0.999998807907104;iRNA_PseU:0 6567 chr11 1093422 1093422 1 + C T KIRC 1093422 + 1093402 1093442 41 ACCCCAACCACGACACCCATCACCACCACCACCACGGTGAC ACCCCAACCACGACACCCATTACCACCACCACCACGGTGAC Direct Gain 0 0.945650609439773 0 0.354434072971344 prediction 0.891301218879546 Functional Gain - MUC2 ENSG00000198788 CDS Human processed_transcript chr11:1093422 chr11:1093422 synonymous SNV . 0 21 hPsi_associated_SNPs_107607 0 0 0 0 0 Endoplasmic reticulum 0 0.439020431215009 0 0 hPsi_site_6567 iPseU_CNN:0;iRNA_PseU:0 6568 chr12 40714878 40714878 1 + G T UCEC 40714878 + 40714858 40714898 41 ATAGAGCTTCCCCATTGTGAGAACTCTGAAATTATCATCCG ATAGAGCTTCCCCATTGTGATAACTCTGAAATTATCATCCG Direct Gain 0 0.945649857632831 0 0.180708378553391 prediction 0.891299715265663 Functional Gain - LRRK2 ENSG00000188906 CDS Human protein_coding chr12:40714878 chr12:40714878 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107608 0 0 0 0 1 exosome 0 0.438811495257665 0 0 hPsi_site_6568 iPseU_CNN:0;iRNA_PseU:0 6569 chr1 11078853 11078853 1 + G A LUAD 11078853 - 11078833 11078873 41 CATTACTTTCACTTGTGTTTCATATTCCGTAAAACGAACAA CATTACTTTCACTTGTGTTTTATATTCCGTAAAACGAACAA Direct Gain 0 0.945646685668215 0 0.38622772693634 prediction 0.891293371336431 Functional Gain - TARDBP ENSG00000120948 CDS Human protein_coding chr1:11078853 chr1:11078853 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107609 0 0 1 0 0 Cytosol 0 0.43871066707667 0 0 hPsi_site_6569 iPseU_CNN:0;iRNA_PseU:0 6570 chr5 37020905 37020905 1 + G A BLCA 37020905 - 37020885 37020925 41 TCGAACAATCAAGCAAGCATCATCATAGTCCACAGTATCAG TCGAACAATCAAGCAAGCATTATCATAGTCCACAGTATCAG Direct Gain 0 0.945645984450562 0 0.935826897621155 prediction 0.891291968901124 Functional Gain - NIPBL ENSG00000164190 CDS Human protein_coding chr5:37020905 chr5:37020905 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107610 0 0 0 0 0 Nucleus 0 0.438648279831958 0.87165379524231 0 hPsi_site_6570 iPseU_CNN:0.87165379524231;iRNA_PseU:0 6571 chr20 30921230 30921230 1 + C T rs576823970 30921230 + 30921210 30921250 41 TGGACCACCTGAGGTTAGGACTTCAAGACCAGCCTGGCCAA TGGACCACCTGAGGTTAGGATTTCAAGACCAGCCTGGCCAA Direct Gain 0 0.945645214561042 0 0.985499858856201 prediction 0.891290429122084 Functional Gain - KIF3B ENSG00000101350 UTR3 Human protein_coding chr20:30921230 chr20:30921230 . . 0 21 hPsi_associated_SNPs_107611 0 0 1 0 0 Ribosome 0 0.438718592995893 0.970999717712402 0 hPsi_site_6571 iPseU_CNN:0.970999717712402;iRNA_PseU:0 6572 chr1 171072991 171072991 1 + G T COAD 171072991 + 171072971 171073011 41 TCCAACTCTTCCAAAGAGATGATGTGTTTCCCAGACTTCCC TCCAACTCTTCCAAAGAGATTATGTGTTTCCCAGACTTCCC Direct Gain 0 0.945643442108296 0 0.430416077375412 prediction 0.891286884216593 Functional Gain - FMO3 ENSG00000007933 CDS Human protein_coding chr1:171072991 chr1:171072991 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107612 1 0 0 0 1 exosome 0 0.438688948659923 0 0 hPsi_site_6572 iPseU_CNN:0;iRNA_PseU:0 6573 chr9 132483014 132483014 1 + G A rs201217720 132483014 - 132482994 132483034 41 TCCAGGAGAGATAATCTGGACTCAGGGCGGTGGGCCGGGGA TCCAGGAGAGATAATCTGGATTCAGGGCGGTGGGCCGGGGA Direct Gain 0 0.945637925034263 0 0.674566745758057 prediction 0.891275850068526 Functional Gain - PRRX2 ENSG00000167157 CDS Human protein_coding chr9:132483014 chr9:132483014 nonsynonymous SNV 0.982 1 21 hPsi_associated_SNPs_107613 0 0 0 0 0 chromatin 0 0.438718592280618 0.349133491516114 0 hPsi_site_6573 iPseU_CNN:0.349133491516114;iRNA_PseU:0 6574 chr22 41574577 41574577 1 + C T SKCM 41574577 + 41574557 41574597 41 AGCAGCATATGCTCCCAAATCAGGCCCAGTCCCCACACCTA AGCAGCATATGCTCCCAAATTAGGCCCAGTCCCCACACCTA Direct Gain 0 0.945637509952205 0 0.676110029220581 prediction 0.891275019904411 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41574577 chr22:41574577 stopgain 0.997 1 21 hPsi_associated_SNPs_107614 0 0 1 0 0 Cytosol 0 0.438718386561332 0.352220058441162 0 hPsi_site_6574 iPseU_CNN:0.352220058441162;iRNA_PseU:0 6575 chr18 9954096 9954096 1 + G T UCEC 9954096 + 9954076 9954116 41 AGCACATTCGGATAAACCTGGATCAACCTCAACTGCATCCT AGCACATTCGGATAAACCTGTATCAACCTCAACTGCATCCT Direct Gain 0 0.945635904515322 0 0.9999680519104 prediction 0.891271809030644 Functional Gain - VAPA ENSG00000101558 CDS Human protein_coding chr18:9954096 chr18:9954096 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107615 0 0 1 0 1 Ribosome 0 0.438966130094697 0.9999361038208 0 hPsi_site_6575 iPseU_CNN:0.9999361038208;iRNA_PseU:0 6576 chr2 28741349 28741349 1 + C T LUSC 28741349 + 28741329 28741369 41 GCAGACCCTGAAGAATTCTCCATTCCCATGCAACCCAAATA GCAGACCCTGAAGAATTCTCTATTCCCATGCAACCCAAATA Direct Gain 0 0.945635531107574 0 0.720441520214081 prediction 0.891271062215148 Functional Gain - PLB1 ENSG00000163803 CDS Human protein_coding chr2:28741349 chr2:28741349 nonsynonymous SNV 0.370 1 21 hPsi_associated_SNPs_107616 0 0 0 0 2 exosome 0 0.438718585351677 0.440883040428162 0 hPsi_site_6576 iPseU_CNN:0.440883040428162;iRNA_PseU:0 6577 chr17 7324694 7324694 1 + C A LUAD 7324694 - 7324674 7324714 41 AGCTGGGACAGGCTGGTACTGAGCCGCCTCTGCCTCTGGCA AGCTGGGACAGGCTGGTACTTAGCCGCCTCTGCCTCTGGCA Direct Gain 0 0.945633101084094 0 0.907413959503174 prediction 0.891266202168187 Functional Gain - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324694 chr17:7324694 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_107617 0 0 0 0 0 exosome 0 0.438718169746155 0.814827919006348 0 hPsi_site_6577 iPseU_CNN:0.814827919006348;iRNA_PseU:0 6578 chr17 73563144 73563144 1 + C T rs553601201 73563144 + 73563124 73563164 41 ATGGGACAGCTGAGCCCGGGCACCCTCAAGCCTTGGAGGCA ATGGGACAGCTGAGCCCGGGTACCCTCAAGCCTTGGAGGCA Direct Gain 0 0.945630938650144 0 0.933209180831909 prediction 0.891261877300289 Functional Gain - LLGL2 ENSG00000073350 intronic Human protein_coding chr17:73563144 chr17:73563144 . . 0 21 hPsi_associated_SNPs_107618 0 0 1 0 0 Endoplasmic reticulum 0 0.438719377486872 0.866418361663818 0 hPsi_site_6578 iPseU_CNN:0.866418361663818;iRNA_PseU:0 6579 chr4 175899008 175899008 1 + C T BLCA 175899008 + 175898988 175899028 41 GGGTGATGCCTTCTCAGAGTCAACCTCCTGTGATGCCTTCC GGGTGATGCCTTCTCAGAGTTAACCTCCTGTGATGCCTTCC Direct Gain 0 0.945630291815024 0 0.999279260635376 prediction 0.891260583630048 Functional Gain - ADAM29 ENSG00000168594 CDS Human protein_coding chr4:175899008 chr4:175899008 stopgain 0.004 0 21 hPsi_associated_SNPs_107619 0 0 0 0 0 exosome 0 0.43871859253522 0.998558521270752 0 hPsi_site_6579 iPseU_CNN:0.998558521270752;iRNA_PseU:0 6580 chr1 54681876 54681876 1 + C T SKCM 54681876 + 54681856 54681896 41 GTGGGCACGGATGGACGTGTCTTCCATTTCCTAGTGTTTCA GTGGGCACGGATGGACGTGTTTTCCATTTCCTAGTGTTTCA Direct Gain 0 0.945625786542956 0 0.869095206260681 prediction 0.891251573085912 Functional Gain - MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54681876 chr1:54681876 synonymous SNV . 0 21 hPsi_associated_SNPs_107620 0 0 1 1 1 Ribosome 0 0.438718591977437 0.738190412521362 0 hPsi_site_6580 iPseU_CNN:0.738190412521362;iRNA_PseU:0 6581 chr9 93640015 93640015 1 + G A LIHC 93640015 - 93639995 93640035 41 GGACCAAGTTCTGCCATCTCCATAACCAGCATCCAGGACTC GGACCAAGTTCTGCCATCTCTATAACCAGCATCCAGGACTC Direct Gain 0 0.945618081654942 0 0.629496216773987 prediction 0.891236163309884 Functional Gain - SYK ENSG00000165025 CDS Human protein_coding chr9:93640015 chr9:93640015 nonsynonymous SNV 0.998 4 21 hPsi_associated_SNPs_107621 0 0 0 0 0 Cytosol 0 0.437794885798066 0.258992433547974 0 hPsi_site_6581 iPseU_CNN:0.258992433547974;iRNA_PseU:0 6582 chr19 36357134 36357134 1 + C A UCEC 36357134 - 36357114 36357154 41 GGAGGGTGGTGGCAGGAAGAGACCTCCTCCAGGGGCTTCGC GGAGGGTGGTGGCAGGAAGATACCTCCTCCAGGGGCTTCGC Direct Gain 0 0.945613639577459 0 1 prediction 0.891227279154917 Functional Gain - KIRREL2 ENSG00000126259 CDS Human protein_coding chr19:36357134 chr19:36357134 nonsynonymous SNV 0.997 3 21 hPsi_associated_SNPs_107622 0 0 0 0 0 exosome 0 0.438718592961386 1 0 hPsi_site_6582 iPseU_CNN:1;iRNA_PseU:0 6583 chr5 129070703 129070703 1 + G A HNSC 129070703 - 129070683 129070723 41 TTTTTCTGAGGAAAAACATTCATTTCCATGTCTTCCTGTGA TTTTTCTGAGGAAAAACATTTATTTCCATGTCTTCCTGTGA Direct Gain 0 0.945613055020791 0 0.359013199806213 prediction 0.891226110041582 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:129070703 chr5:129070703 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_107623 0 0 0 0 0 exosome 0 0.438437068295713 0 0 hPsi_site_6583 iPseU_CNN:0;iRNA_PseU:0 6584 chr8 99170046 99170046 1 + G T UCEC 99170046 + 99170026 99170066 41 AGCCCCGAGCCTCACACCATGATCTGTGTCCCAGCCAAGGA AGCCCCGAGCCTCACACCATTATCTGTGTCCCAGCCAAGGA Direct Gain 0 0.945607759952856 0 0.607643008232117 prediction 0.891215519905712 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99170046 chr8:99170046 nonsynonymous SNV 0.988 1 21 hPsi_associated_SNPs_107624 0 0 0 0 0 Mitochondrion 0 0.438716918953083 0.215286016464234 0 hPsi_site_6584 iPseU_CNN:0.215286016464234;iRNA_PseU:0 6585 chr8 77618646 77618646 1 + G A SKCM 77618646 - 77618626 77618666 41 GTTCCTGGCGACATTGGTTTCATAATCACAAACTTCACACC GTTCCTGGCGACATTGGTTTTATAATCACAAACTTCACACC Direct Gain 0 0.945600551195965 0 0.0652916729450226 prediction 0.891201102391929 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77618646 chr8:77618646 nonsynonymous SNV 0.998 3 21 hPsi_associated_SNPs_107625 0 0 0 0 0 Ribosome 0 0.438624286040637 0 0 hPsi_site_6585 iPseU_CNN:0;iRNA_PseU:0 6586 chr1 228246752 228246752 1 + G A UCEC 228246752 - 228246732 228246772 41 GGTTGCGACCACCAGCATGTCTTCACCTCGCAGCTGCCCGA GGTTGCGACCACCAGCATGTTTTCACCTCGCAGCTGCCCGA Direct Gain 0 0.945600396136864 0 0.999992251396179 prediction 0.891200792273728 Functional Gain - WNT3A ENSG00000154342 CDS Human protein_coding chr1:228246752 chr1:228246752 synonymous SNV . 0 21 hPsi_associated_SNPs_107626 0 0 0 0 0 exosome 0 0.438718577799576 0.999984502792358 0 hPsi_site_6586 iPseU_CNN:0.999984502792358;iRNA_PseU:0 6587 chr10 75558115 75558115 1 + G T SKCM 75558115 + 75558095 75558135 41 GCAAGAGACTCCAATATGGTGAGGGCGGCAGCAGAGCTGGC GCAAGAGACTCCAATATGGTTAGGGCGGCAGCAGAGCTGGC Direct Gain 0 0.94559991994953 0 0.361250221729279 prediction 0.89119983989906 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75558115 chr10:75558115 synonymous SNV . 0 21 hPsi_associated_SNPs_107627 0 0 1 0 1 Cytosol 0 0.437645103733321 0 0 hPsi_site_6587 iPseU_CNN:0;iRNA_PseU:0 6588 chr9 140728899 140728899 1 + C T ESCA 140728899 + 140728879 140728919 41 CTGGTGCCCGTGCGCGTGTTCATGGCCCACCAGGACCTGCG CTGGTGCCCGTGCGCGTGTTTATGGCCCACCAGGACCTGCG Direct Gain 0 0.945599516669463 0 0.999178528785706 prediction 0.891199033338925 Functional Gain - EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140728899 chr9:140728899 synonymous SNV . 0 21 hPsi_associated_SNPs_107628 0 0 1 0 2 chromatin 0 0.438686719812343 0.998357057571412 0 hPsi_site_6588 iPseU_CNN:0.998357057571412;iRNA_PseU:0 6589 chr19 45375183 45375183 1 + C A UCEC 45375183 - 45375163 45375203 41 GGTGGGCGGCCCTCTTTGGAGATGCAGAGGGCCACTGTCGT GGTGGGCGGCCCTCTTTGGATATGCAGAGGGCCACTGTCGT Direct Gain 0 0.945594746359081 0 0.940975666046143 prediction 0.891189492718162 Functional Gain - NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375183 chr19:45375183 synonymous SNV . 0 21 hPsi_associated_SNPs_107629 0 0 0 0 0 Ribosome 0 0.438718476545538 0.881951332092286 0 hPsi_site_6589 iPseU_CNN:0.881951332092286;iRNA_PseU:0 6590 chr10 28970340 28970340 1 + C A rs138814781 28970340 - 28970320 28970360 41 GTTTGGCTTGGCAGATGTCTGTCGTGCTTGCAAGAGAGTCC GTTTGGCTTGGCAGATGTCTTTCGTGCTTGCAAGAGAGTCC Direct Gain 0 0.945591506673692 0 0.871275186538696 prediction 0.891183013347385 Functional Gain - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28970340 chr10:28970340 nonsynonymous SNV 0.991 2 21 hPsi_associated_SNPs_107630 0 0 0 0 0 Ribosome 0 0.434887780845051 0.742550373077392 0 hPsi_site_6590 iPseU_CNN:0.742550373077392;iRNA_PseU:0 6591 chr12 5153980 5153980 1 + G A rs367992628 5153980 - 5153960 5154000 41 GCGGGGCAGGGGCTTCTCCTCTTCTTTAATGAAGCCCTCAT GCGGGGCAGGGGCTTCTCCTTTTCTTTAATGAAGCCCTCAT Direct Gain 0 0.945589045820063 0 0.560835838317871 prediction 0.891178091640125 Functional Gain - KCNA5 ENSG00000130037 CDS Human protein_coding chr12:5153980 chr12:5153980 nonsynonymous SNV 0.045 1 21 hPsi_associated_SNPs_107631 0 0 0 0 0 exosome 0 0.438718592995102 0.121671676635742 0 hPsi_site_6591 iPseU_CNN:0.121671676635742;iRNA_PseU:0 6592 chr3 57898164 57898164 1 + G T SKCM 57898164 + 57898144 57898184 41 TCCGGGAGGAGAAGGACAGTGAAATCACAAGTACTAGAGAT TCCGGGAGGAGAAGGACAGTTAAATCACAAGTACTAGAGAT Direct Gain 0 0.945586107852277 0 0.996919929981232 prediction 0.891172215704554 Functional Gain - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898164 chr3:57898164 stopgain 0.943 1 21 hPsi_associated_SNPs_107632 0 0 0 0 1 Ribosome 0 0.440227959665984 0.993839859962464 0 hPsi_site_6592 iPseU_CNN:0.993839859962464;iRNA_PseU:0 6593 chr18 59157870 59157870 1 + T A SKCM 59157870 - 59157850 59157890 41 TCCGAGAGAACGGTGGTCGTAAGGTCCATCAGCCCCCAGAA TCCGAGAGAACGGTGGTCGTTAGGTCCATCAGCCCCCAGAA Direct Gain 0 0.945581392590156 0 1 prediction 0.891162785180311 Functional Gain - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59157870 chr18:59157870 synonymous SNV . 0 21 hPsi_associated_SNPs_107633 0 0 0 0 0 nucleus 0 0.438718595533768 1 0 hPsi_site_6593 iPseU_CNN:1;iRNA_PseU:0 6594 chr1 158450078 158450078 1 + G A LUAD 158450078 - 158450058 158450098 41 GCATAGCGATCATAACCCATCACACCCAATAGCAGGCAGTT GCATAGCGATCATAACCCATTACACCCAATAGCAGGCAGTT Direct Gain 0 0.945581127171145 0 0.898786306381226 prediction 0.891162254342289 Functional Gain - OR10R2 ENSG00000198965 CDS Human protein_coding chr1:158450078 chr1:158450078 synonymous SNV . 0 21 hPsi_associated_SNPs_107634 0 0 0 0 0 unknown 0 0.438714691251916 0.797572612762452 0 hPsi_site_6594 iPseU_CNN:0.797572612762452;iRNA_PseU:0 6595 chr2 178364449 178364449 1 + C T UCEC 178364449 + 178364429 178364469 41 ACAAGTGTATGATATTGCTGCAAAATTTGGGTATGGCTTCA ACAAGTGTATGATATTGCTGTAAAATTTGGGTATGGCTTCA Direct Gain 0 0.945575381657596 0 0.934422135353088 prediction 0.891150763315192 Functional Gain - AGPS ENSG00000018510 CDS Human protein_coding chr2:178364449 chr2:178364449 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107635 0 0 1 0 1 Nucleus 0 0.436699520554107 0.868844270706176 0 hPsi_site_6595 iPseU_CNN:0.868844270706176;iRNA_PseU:0 6596 chr20 55108510 55108510 1 + G A rs201542308 55108510 - 55108490 55108530 41 GAATCCGAAAGTGCTCTCCACACGGCACCTTCCCCTGGGGT GAATCCGAAAGTGCTCTCCATACGGCACCTTCCCCTGGGGT Direct Gain 0 0.945573862607826 0 0.888289928436279 prediction 0.891147725215651 Functional Gain - FAM209B ENSG00000213714 CDS Human protein_coding chr20:55108510 chr20:55108510 nonsynonymous SNV 0.009 3 21 hPsi_associated_SNPs_107636 0 0 0 0 0 exosome 0 0.438820718928518 0.776579856872558 0 hPsi_site_6596 iPseU_CNN:0.776579856872558;iRNA_PseU:0 6597 chrX 153657488 153657488 1 + C A BRCA 153657488 - 153657468 153657508 41 GAACAGCAGCACATTCCTGGGACCCAGCTCCAGGGCGGGAT GAACAGCAGCACATTCCTGGTACCCAGCTCCAGGGCGGGAT Direct Gain 0 0.945562396864443 0 0.99999988079071 prediction 0.891124793728887 Functional Gain - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153657488 chrX:153657488 nonsynonymous SNV 0.913 4 21 hPsi_associated_SNPs_107637 0 0 0 0 0 Ribosome 0 0.438717663511608 0.99999976158142 0 hPsi_site_6597 iPseU_CNN:0.99999976158142;iRNA_PseU:0 6598 chr16 67291482 67291482 1 + G A UCEC 67291482 - 67291462 67291502 41 GTCCCTCCAGTAGTGGTAGCCATGGTGCCCCACAACGTCCT GTCCCTCCAGTAGTGGTAGCTATGGTGCCCCACAACGTCCT Direct Gain 0 0.945561299077727 0 0.986698865890503 prediction 0.891122598155454 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67291482 chr16:67291482 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107638 0 0 0 0 0 Cytosol 0 0.438718592996901 0.973397731781006 0 hPsi_site_6598 iPseU_CNN:0.973397731781006;iRNA_PseU:0 6599 chr5 78416261 78416261 1 + C A UCEC 78416261 - 78416241 78416281 41 TGCAGCTAAGGTATGAAGGTGTCTGACTCACTCCTCCTGCT TGCAGCTAAGGTATGAAGGTTTCTGACTCACTCCTCCTGCT Direct Gain 0 0.945559906718581 0 0.99812787771225 prediction 0.891119813437163 Functional Gain - BHMT ENSG00000145692 CDS Human protein_coding chr5:78416261 chr5:78416261 nonsynonymous SNV 0.957 4 21 hPsi_associated_SNPs_107639 0 0 0 0 0 exosome 0 0.439993803497489 0.9962557554245 0 hPsi_site_6599 iPseU_CNN:0.9962557554245;iRNA_PseU:0 6600 chr8 102678844 102678844 1 + C T SKCM 102678844 + 102678824 102678864 41 GTGAACATGGATGACAACATCATCGAGCACTACTCGAACGA GTGAACATGGATGACAACATTATCGAGCACTACTCGAACGA Direct Gain 0 0.945556001802362 0 0.998325109481812 prediction 0.891112003604725 Functional Gain - GRHL2 ENSG00000083307 CDS Human protein_coding chr8:102678844 chr8:102678844 synonymous SNV . 0 21 hPsi_associated_SNPs_107640 0 0 0 0 1 Nucleus 0 0.437425204132483 0.996650218963624 0 hPsi_site_6600 iPseU_CNN:0.996650218963624;iRNA_PseU:0 6601 chr20 16030486 16030486 1 + G A SKCM 16030486 - 16030466 16030506 41 TCTTTGTTCCTTCGCTTCATCTTGTGCCCCTGCTGAAGACA TCTTTGTTCCTTCGCTTCATTTTGTGCCCCTGCTGAAGACA Direct Gain 0 0.945550691734354 0 0.907666146755219 prediction 0.891101383468707 Functional Gain - MACROD2 ENSG00000172264 CDS Human protein_coding chr20:16030486 chr20:16030486 nonsynonymous SNV 0.916 2 21 hPsi_associated_SNPs_107641 0 0 0 0 0 cytosol 0 0.438718794821453 0.815332293510438 0 hPsi_site_6601 iPseU_CNN:0.815332293510438;iRNA_PseU:0 6602 chr1 161138944 161138944 1 + C T UCEC 161138944 + 161138924 161138964 41 GAGGCCAGCCGGTCTGTGGGCTCAGCCTCCAGGCAGAAGGG GAGGCCAGCCGGTCTGTGGGTTCAGCCTCCAGGCAGAAGGG Direct Gain 0 0.945548637463849 0 0.623110055923462 prediction 0.891097274927697 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161138944 chr1:161138944 nonsynonymous SNV 0.741 4 21 hPsi_associated_SNPs_107642 0 0 1 0 1 Cytosol 0 0.438718756805534 0.246220111846924 0 hPsi_site_6602 iPseU_CNN:0.246220111846924;iRNA_PseU:0 6603 chr5 79817895 79817895 1 + C T COAD 79817895 + 79817875 79817915 41 CAGCCTGTAACGTTCCCTGTCAGAGCAGCATTAGTCAGGCA CAGCCTGTAACGTTCCCTGTTAGAGCAGCATTAGTCAGGCA Direct Gain 0 0.945545234945658 0 0.98402464389801 prediction 0.891090469891316 Functional Gain - FAM151B ENSG00000152380 CDS Human protein_coding chr5:79817895 chr5:79817895 synonymous SNV . 0 21 hPsi_associated_SNPs_107643 0 0 0 1 1 exosome 0 0.438720068562713 0.96804928779602 0 hPsi_site_6603 iPseU_CNN:0.96804928779602;iRNA_PseU:0 6604 chr17 73998597 73998597 1 + G A LUSC 73998597 - 73998577 73998617 41 GGGGCGCGATACCACAGTGTCACCACCTGCAGGGCAAAGAA GGGGCGCGATACCACAGTGTTACCACCTGCAGGGCAAAGAA Direct Gain 0 0.945544278529564 0 0.999594449996948 prediction 0.891088557059129 Functional Gain - CDK3 ENSG00000250506 CDS Human protein_coding chr17:73998597 chr17:73998597 synonymous SNV . 0 21 hPsi_associated_SNPs_107644 0 0 0 0 0 cytosol 0 0.438267108692123 0.999188899993896 0 hPsi_site_6604 iPseU_CNN:0.999188899993896;iRNA_PseU:0 6605 chr2 24929484 24929484 1 + C A LUSC 24929484 - 24929464 24929504 41 AGGGATTTACTCGGGGAATTGACATTCCAGAATTAGTGTCA AGGGATTTACTCGGGGAATTTACATTCCAGAATTAGTGTCA Direct Gain 0 0.945544231459931 0 0.999986827373505 prediction 0.891088462919862 Functional Gain - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24929484 chr2:24929484 stopgain 1.000 0 21 hPsi_associated_SNPs_107645 0 0 0 0 0 Cytosol 0 0.438719306604095 0.99997365474701 0 hPsi_site_6605 iPseU_CNN:0.99997365474701;iRNA_PseU:0 6606 chr3 130120687 130120687 1 + C A COAD 130120687 - 130120667 130120707 41 GAGTGGCACCTTCATGGCTTGTAGTCCTCGGGTCCCATGAG GAGTGGCACCTTCATGGCTTTTAGTCCTCGGGTCCCATGAG Direct Gain 0 0.945539230831236 0 0.969566345214844 prediction 0.891078461662472 Functional Gain - COL6A5 ENSG00000172752 CDS Human protein_coding chr3:130120687 chr3:130120687 nonsynonymous SNV 0.021 1 21 hPsi_associated_SNPs_107646 0 0 0 0 0 chromatin 0 0.438718592995102 0.939132690429688 0 hPsi_site_6606 iPseU_CNN:0.939132690429688;iRNA_PseU:0 6607 chr1 66713189 66713189 1 + C A LUAD 66713189 - 66713169 66713209 41 AGCGGAAGAGCTGGCCTGGGGATCCAGTGGACTCCGACCTG AGCGGAAGAGCTGGCCTGGGTATCCAGTGGACTCCGACCTG Direct Gain 0 0.945536442023139 0 0.999656736850739 prediction 0.891072884046278 Functional Gain - PDE4B ENSG00000184588 CDS Human protein_coding chr1:66713189 chr1:66713189 nonsynonymous SNV 0.960 2 21 hPsi_associated_SNPs_107647 0 0 0 0 0 exosome 0 0.438718591958226 0.999313473701478 0 hPsi_site_6607 iPseU_CNN:0.999313473701478;iRNA_PseU:0 6608 chr10 38737231 38737231 1 + C T rs34016086 38737231 + 38737211 38737251 41 TTTAGGCCAAGCTCATGCTTCACAAGGGTCTTTCCAGGCCC TTTAGGCCAAGCTCATGCTTTACAAGGGTCTTTCCAGGCCC Direct Gain 0 0.945533186388317 0 0.999879837036133 prediction 0.891066372776634 Functional Gain - LINC00999 ENSG00000225119 downstream Human other chr10:38737231 chr10:38737231 . . 0 21 hPsi_associated_SNPs_107648 0 0 0 0 0 nucleoplasm 0 0.438718592995088 0.999759674072266 0 hPsi_site_6608 iPseU_CNN:0.999759674072266;iRNA_PseU:0 6609 chr2 242007231 242007231 1 + C A UCEC 242007231 - 242007211 242007251 41 TGCAGGGCCCACTGCACTGAGATGGTGCTAGCCGTCACATT TGCAGGGCCCACTGCACTGATATGGTGCTAGCCGTCACATT Direct Gain 0 0.945531987191279 0 0.992236435413361 prediction 0.891063974382559 Functional Gain - SNED1 ENSG00000162804 CDS Human protein_coding chr2:242007231 chr2:242007231 synonymous SNV . 0 21 hPsi_associated_SNPs_107649 0 0 0 0 0 nucleus 0 0.438503555315002 0.984472870826722 0 hPsi_site_6609 iPseU_CNN:0.984472870826722;iRNA_PseU:0 6610 chr16 16208672 16208672 1 + G A OV 16208672 - 16208652 16208692 41 ACGTGCAGACAGCGGGAAGCCAAGATCCCCCCGATGGACAC ACGTGCAGACAGCGGGAAGCTAAGATCCCCCCGATGGACAC Direct Gain 0 0.94552893177227 0 0.99255496263504 prediction 0.891057863544541 Functional Gain - ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16208672 chr16:16208672 synonymous SNV . 0 21 hPsi_associated_SNPs_107650 0 0 0 0 0 Mitochondrion 0 0.43871844069372 0.98510992527008 0 hPsi_site_6610 iPseU_CNN:0.98510992527008;iRNA_PseU:0 6611 chr19 18234051 18234051 1 + C T BLCA 18234051 + 18234031 18234071 41 GCTCATCCTCCCGGGAACGTCTCCACCAGCTTCCCTTCCAG GCTCATCCTCCCGGGAACGTTTCCACCAGCTTCCCTTCCAG Direct Gain 0 0.945526571044087 0 0.999933004379272 prediction 0.891053142088174 Functional Gain - MAST3 ENSG00000099308 CDS Human protein_coding chr19:18234051 chr19:18234051 nonsynonymous SNV 0.988 3 21 hPsi_associated_SNPs_107651 0 0 0 0 1 Cytosol 0 0.438713807673278 0.999866008758544 0 hPsi_site_6611 iPseU_CNN:0.999866008758544;iRNA_PseU:0 6612 chr9 2083375 2083375 1 + G T THYM 2083375 + 2083355 2083395 41 CTAACTGGACATATGAATTTGACAAATGGGCTCCTTCTGTG CTAACTGGACATATGAATTTTACAAATGGGCTCCTTCTGTG Direct Gain 0 0.945524534286566 0 0.998859047889709 prediction 0.891049068573132 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2083375 chr9:2083375 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107652 0 0 1 0 2 Nucleus 0 0.438718534149145 0.997718095779418 0 hPsi_site_6612 iPseU_CNN:0.997718095779418;iRNA_PseU:0 6613 chr3 178919142 178919142 1 + G A LUSC 178919142 - 178919122 178919162 41 ACACAGTCATGGTTGATTTTCAGAGTATACTTCTGCTTGTC ACACAGTCATGGTTGATTTTTAGAGTATACTTCTGCTTGTC Direct Gain 0 0.9455217454512 0 0.523148119449615 prediction 0.891043490902399 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178919142 chr3:178919142 synonymous SNV . 0 21 hPsi_associated_SNPs_107653 0 0 0 0 0 Ribosome 0 0.438739639171706 0.0462962388992301 0 hPsi_site_6613 iPseU_CNN:0.0462962388992301;iRNA_PseU:0 6614 chr5 35873648 35873648 1 + G A SKCM 35873648 - 35873628 35873668 41 GATGGATCGAACTTTAATCTCATACATTGCTGCCGGTTGGA GATGGATCGAACTTTAATCTTATACATTGCTGCCGGTTGGA Direct Gain 0 0.945521674551759 0 0.999855875968933 prediction 0.891043349103517 Functional Gain - IL7R ENSG00000168685 CDS Human protein_coding chr5:35873648 chr5:35873648 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_107654 0 0 0 0 0 Endoplasmic reticulum 0 0.438185024636203 0.999711751937866 0 hPsi_site_6614 iPseU_CNN:0.999711751937866;iRNA_PseU:0 6615 chr12 107114620 107114620 1 + C A LUSC 107114620 - 107114600 107114640 41 CTGTGCAAGGTCATGTCCCGGATCACCCTTGTGCCGAAACA CTGTGCAAGGTCATGTCCCGTATCACCCTTGTGCCGAAACA Direct Gain 0 0.945518964120105 0 0.996628403663635 prediction 0.89103792824021 Functional Gain - RFX4 ENSG00000111783 CDS Human protein_coding chr12:107114620 chr12:107114620 synonymous SNV . 0 21 hPsi_associated_SNPs_107655 0 0 0 0 0 nucleoplasm 0 0.438716637001857 0.99325680732727 0 hPsi_site_6615 iPseU_CNN:0.99325680732727;iRNA_PseU:0 6616 chrX 105912490 105912490 1 + G A UCEC 105912490 - 105912470 105912510 41 GGATATGCACAGCTGTAATTCATGGAGGTCAACAGTGTGTC GGATATGCACAGCTGTAATTTATGGAGGTCAACAGTGTGTC Direct Gain 0 0.94551754263939 0 0.895583748817444 prediction 0.89103508527878 Functional Gain - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105912490 chrX:105912490 nonsynonymous SNV 0.996 3 21 hPsi_associated_SNPs_107656 0 0 0 0 0 nucleus 0 0.438726595157659 0.791167497634888 0 hPsi_site_6616 iPseU_CNN:0.791167497634888;iRNA_PseU:0 6617 chr2 68607984 68607984 1 + G A UCEC 68607984 - 68607964 68608004 41 CCTCCTGGTAGATTTCCTGGCAAATTTCTGGCCTCCTTCAA CCTCCTGGTAGATTTCCTGGTAAATTTCTGGCCTCCTTCAA Direct Gain 0 0.945515949172464 0 0.999645113945007 prediction 0.891031898344927 Functional Gain - PLEK ENSG00000115956 CDS Human protein_coding chr2:68607984 chr2:68607984 nonsynonymous SNV 0.988 1 21 hPsi_associated_SNPs_107657 0 0 0 0 0 exosome 0 0.438718592996302 0.999290227890014 0 hPsi_site_6617 iPseU_CNN:0.999290227890014;iRNA_PseU:0 6618 chr12 9851023 9851023 1 + T A rs1056151 9851023 - 9851003 9851043 41 ACCACCATTCATTGAAGACTATTTTTTCCCCATTGTGTATT ACCACCATTCATTGAAGACTTTTTTTTCCCCATTGTGTATT Direct Gain 0 0.945515202136325 0 0.00189599394798279 prediction 0.891030404272651 Functional Gain - CLEC2D ENSG00000213443;ENSG00000256582 intergenic Human other chr12:9851023 chr12:9851023 . . 0 21 hPsi_associated_SNPs_107658 0 0 0 0 0 nucleoplasm 0 0.438718591917312 0 0 hPsi_site_6618 iPseU_CNN:0;iRNA_PseU:0 6619 chr5 147040892 147040892 1 + C T LUSC 147040892 + 147040872 147040912 41 CTCACAGCCTGCAGCTCCTTCATCTTCTCCTCATGGAGCTT CTCACAGCCTGCAGCTCCTTTATCTTCTCCTCATGGAGCTT Direct Gain 0 0.945512228192853 0 0.994969844818115 prediction 0.891024456385707 Functional Gain - JAKMIP2 ENSG00000176049 CDS Human protein_coding chr5:147040892 chr5:147040892 nonsynonymous SNV 1.000 1 21 hPsi_associated_SNPs_107659 0 0 0 1 0 Endoplasmic reticulum 0 0.438717105036764 0.98993968963623 0 hPsi_site_6619 iPseU_CNN:0.98993968963623;iRNA_PseU:0 6620 chr4 110791056 110791056 1 + C T BLCA 110791056 + 110791036 110791076 41 ATCTGTATCTAGCGCATCATCATATCTTTGGTCCTCTTCCT ATCTGTATCTAGCGCATCATTATATCTTTGGTCCTCTTCCT Direct Gain 0 0.945511616764217 0 0.989487886428833 prediction 0.891023233528434 Functional Gain - LRIT3 ENSG00000183423 CDS Human protein_coding chr4:110791056 chr4:110791056 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107660 0 0 0 0 0 Nucleus 0 0.438886548550271 0.978975772857666 0 hPsi_site_6620 iPseU_CNN:0.978975772857666;iRNA_PseU:0 6621 chr5 128301992 128301992 1 + G A LUSC 128301992 - 128301972 128302012 41 AAGAATTTATCCAGCACAGTCACCAGCTCCCCTCTCTTTTC AAGAATTTATCCAGCACAGTTACCAGCTCCCCTCTCTTTTC Direct Gain 0 0.945511256622337 0 0.0418253839015961 prediction 0.891022513244674 Functional Gain - SLC27A6 ENSG00000113396 CDS Human protein_coding chr5:128301992 chr5:128301992 synonymous SNV . 0 21 hPsi_associated_SNPs_107661 0 0 0 0 0 Endoplasmic reticulum 0 0.438715566801394 0 0 hPsi_site_6621 iPseU_CNN:0;iRNA_PseU:0 6622 chr19 43866295 43866295 1 + C T SKCM 43866295 + 43866275 43866315 41 GTGGCCCAACCTTCCAGCTTCTTGTTGAACCACACCAGACA GTGGCCCAACCTTCCAGCTTTTTGTTGAACCACACCAGACA Direct Gain 0 0.945510769691063 0 0.976420521736145 prediction 0.891021539382126 Functional Gain - CD177 ENSG00000204936 CDS Human protein_coding chr19:43866295 chr19:43866295 unknown . 0 21 hPsi_associated_SNPs_107662 0 0 0 0 1 exosome 0 0.438782978137343 0.95284104347229 0 hPsi_site_6622 iPseU_CNN:0.95284104347229;iRNA_PseU:0 6623 chr14 50360571 50360571 1 + G A BLCA 50360571 - 50360551 50360591 41 CCCACAGTGGGAATGGTGGTCACCGACTGGCCCAGCTTCAA CCCACAGTGGGAATGGTGGTTACCGACTGGCCCAGCTTCAA Direct Gain 0 0.945509988495665 0 0.998410880565643 prediction 0.89101997699133 Functional Gain - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360571 chr14:50360571 synonymous SNV . 0 21 hPsi_associated_SNPs_107663 0 0 0 0 0 Cytosol 0 0.43859082592504 0.996821761131286 0 hPsi_site_6623 iPseU_CNN:0.996821761131286;iRNA_PseU:0 6624 chr15 75185540 75185540 1 + G A LUAD 75185540 - 75185520 75185560 41 ACAGCCTGGGAGTCATGGCTCATGGTCTGCTTCAGGTGTGT ACAGCCTGGGAGTCATGGCTTATGGTCTGCTTCAGGTGTGT Direct Gain 0 0.945509223740324 0 0.999781012535095 prediction 0.891018447480648 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75185540 chr15:75185540 nonsynonymous SNV 0.003 1 21 hPsi_associated_SNPs_107664 0 0 0 0 0 Ribosome 0 0.438740183745481 0.99956202507019 0 hPsi_site_6624 iPseU_CNN:0.99956202507019;iRNA_PseU:0 6625 chr2 102486222 102486222 1 + G T SARC 102486222 + 102486202 102486242 41 ATGTGGAGCAGGAAGGGGCTGACGAGTCCACCTCAGGACCA ATGTGGAGCAGGAAGGGGCTTACGAGTCCACCTCAGGACCA Direct Gain 0 0.945508032720475 0 0.999984979629517 prediction 0.891016065440949 Functional Gain - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486222 chr2:102486222 nonsynonymous SNV 0.823 2 21 hPsi_associated_SNPs_107665 0 0 1 0 0 Ribosome 0 0.438718593138338 0.999969959259034 0 hPsi_site_6625 iPseU_CNN:0.999969959259034;iRNA_PseU:0 6626 chr2 113940600 113940600 1 + C T SKCM 113940600 + 113940580 113940620 41 GGGCTGAAATGCTGTCTCCCCACGCCCCCTGTGGACCTCCC GGGCTGAAATGCTGTCTCCCTACGCCCCCTGTGGACCTCCC Direct Gain 0 0.945505159795804 0 0.995776057243347 prediction 0.891010319591608 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940600 chr2:113940600 synonymous SNV . 0 21 hPsi_associated_SNPs_107666 0 0 0 0 0 chromatin 0 0.438800993567412 0.991552114486694 0 hPsi_site_6626 iPseU_CNN:0.991552114486694;iRNA_PseU:0 6627 chr7 143807033 143807033 1 + G A BLCA 143807033 - 143807013 143807053 41 GCAGATGGCCACATACCTATCATAGGACATCACCACCAAAA GCAGATGGCCACATACCTATTATAGGACATCACCACCAAAA Direct Gain 0 0.945504943472939 0 0.892669081687927 prediction 0.891009886945879 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807033 chr7:143807033 nonsynonymous SNV 0.892 3 21 hPsi_associated_SNPs_107667 0 0 0 0 0 unknown 0 0.438761855512203 0.785338163375854 0 hPsi_site_6627 iPseU_CNN:0.785338163375854;iRNA_PseU:0 6628 chr2 69474639 69474639 1 + C A rs149056777 69474639 - 69474619 69474659 41 GGTTGGGGAGAGGCTGGGGGGTTGCTTTCATGAGTCTGGAA GGTTGGGGAGAGGCTGGGGGTTTGCTTTCATGAGTCTGGAA Direct Gain 0 0.945501167835603 0 0.0400888919830322 prediction 0.891002335671206 Functional Gain - ANTXR1 ENSG00000169604 UTR3 Human protein_coding chr2:69474639 chr2:69474639 . . 0 21 hPsi_associated_SNPs_107668 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592995101 0 0 hPsi_site_6628 iPseU_CNN:0;iRNA_PseU:0 6629 chr17 61908762 61908762 1 + G T BLCA 61908762 + 61908742 61908782 41 GGCGCATTGACAGAAAAATTGAATTCCCACCCCCCAATGAG GGCGCATTGACAGAAAAATTTAATTCCCACCCCCCAATGAG Direct Gain 0 0.94549730284174 0 0.804959297180176 prediction 0.89099460568348 Functional Gain - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908762 chr17:61908762 stopgain 1.000 1 21 hPsi_associated_SNPs_107669 0 0 1 0 2 Ribosome 0 0.438718592995102 0.609918594360352 0 hPsi_site_6629 iPseU_CNN:0.609918594360352;iRNA_PseU:0 6630 chr22 24040008 24040008 1 + C T rs183284942 24040008 + 24039988 24040028 41 CCAGGGGCCTTTCTGATGGACTCTGTCTGCCTTCCAGGGCA CCAGGGGCCTTTCTGATGGATTCTGTCTGCCTTCCAGGGCA Direct Gain 0 0.945492917883438 0 0.922523736953735 prediction 0.890985835766875 Functional Gain - GUSBP11 ENSG00000228315;ENSG00000272578;ENSG00000273000 ncRNA_intronic Human other chr22:24040008 chr22:24040008 . . 0 21 hPsi_associated_SNPs_107670 0 0 0 0 1 unknown 0 0.43871859299511 0.84504747390747 0 hPsi_site_6630 iPseU_CNN:0.84504747390747;iRNA_PseU:0 6631 chr9 100843119 100843119 1 + G T LGG 100843119 + 100843099 100843139 41 AATATCAGAAGCTCTTTCCTGACATTCCCATAGGGTATTCT AATATCAGAAGCTCTTTCCTTACATTCCCATAGGGTATTCT Direct Gain 0 0.945485637882759 0 0.999102830886841 prediction 0.890971275765519 Functional Gain - NANS ENSG00000095380 CDS Human protein_coding chr9:100843119 chr9:100843119 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107671 0 0 0 0 1 Ribosome 0 0.438718600046288 0.998205661773682 0 hPsi_site_6631 iPseU_CNN:0.998205661773682;iRNA_PseU:0 6632 chr19 35739712 35739712 1 + G A rs45459300 35739712 - 35739692 35739732 41 AGATATGGGGGAGAAAGGTGCTTGACCCGCCGCGGTCCTCC AGATATGGGGGAGAAAGGTGTTTGACCCGCCGCGGTCCTCC Direct Gain 0 0.945485554152253 0 0.992357730865479 prediction 0.890971108304505 Functional Gain - LSR ENSG00000105699 UTR5 Human protein_coding chr19:35739712 chr19:35739712 . . 0 21 hPsi_associated_SNPs_107672 0 0 0 0 0 chromatin 0 0.438722682273302 0.984715461730958 0 hPsi_site_6632 iPseU_CNN:0.984715461730958;iRNA_PseU:0 6633 chr1 204095308 204095308 1 + G A rs143210320 204095308 - 204095288 204095328 41 CTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGA CTGTGCCCATCGAGTTGGGATAAGGTCTTCCCCAGAGGAGA Direct Gain 0 0.94548365407034 0 0.987988233566284 prediction 0.890967308140681 Functional Gain - SOX13 ENSG00000143842 UTR3 Human protein_coding chr1:204095308 chr1:204095308 . . 0 21 hPsi_associated_SNPs_107673 0 0 0 0 0 nucleus 0 0.438718592998809 0.975976467132568 0 hPsi_site_6633 iPseU_CNN:0.975976467132568;iRNA_PseU:0 6634 chr10 106118310 106118310 1 + A T LUAD 106118310 + 106118290 106118330 41 AAATGCAGAGATTGTAGTGAATTCTGCGAAGGTCGCCACTG AAATGCAGAGATTGTAGTGATTTCTGCGAAGGTCGCCACTG Direct Gain 0 0.945481417507763 0 0.842503905296326 prediction 0.890962835015525 Functional Gain - CFAP58 ENSG00000120051 CDS Human protein_coding chr10:106118310 chr10:106118310 nonsynonymous SNV 0.522 4 21 hPsi_associated_SNPs_107674 0 0 0 0 1 nucleolus 0 0.438694274637056 0.685007810592652 0 hPsi_site_6634 iPseU_CNN:0.685007810592652;iRNA_PseU:0 6635 chr15 31233969 31233969 1 + G A BLCA 31233969 - 31233949 31233989 41 GTGGCTCCATCACAGCCTTTCACAAGCTCTCCCTCCTGGCT GTGGCTCCATCACAGCCTTTTACAAGCTCTCCCTCCTGGCT Direct Gain 0 0.945481390637373 0 0.998242497444153 prediction 0.890962781274746 Functional Gain - MTMR10 ENSG00000166912 CDS Human protein_coding chr15:31233969 chr15:31233969 nonsynonymous SNV 0.970 1 21 hPsi_associated_SNPs_107675 0 0 0 0 0 Cytosol 0 0.438717650438444 0.996484994888306 0 hPsi_site_6635 iPseU_CNN:0.996484994888306;iRNA_PseU:0 6636 chr7 64646862 64646862 1 + C T UCEC 64646862 + 64646842 64646882 41 ATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCC ATGCCTACCTCCGAGACAGTTTTTCTCATCTTGTTCCTGCC Direct Gain 0 0.945478496298552 0 0.879522383213043 prediction 0.890956992597105 Functional Gain - INTS4P1 ENSG00000164669 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64646862 chr7:64646862 . . 0 21 hPsi_associated_SNPs_107676 0 0 0 4 1 unknown 0 0.438718464345149 0.759044766426086 0 hPsi_site_6636 iPseU_CNN:0.759044766426086;iRNA_PseU:0 6637 chr2 242509608 242509608 1 + C T COAD 242509608 + 242509588 242509628 41 TGGCCGTGGACTGTGTGAGGCAGGCCCAGCCTGCCATGGTC TGGCCGTGGACTGTGTGAGGTAGGCCCAGCCTGCCATGGTC Direct Gain 0 0.94547409976256 0 0.999941289424896 prediction 0.89094819952512 Functional Gain - BOK ENSG00000176720 CDS Human protein_coding chr2:242509608 chr2:242509608 stopgain 0.984 1 21 hPsi_associated_SNPs_107677 0 0 1 0 2 Ribosome 0 0.438718596248238 0.999882578849792 0 hPsi_site_6637 iPseU_CNN:0.999882578849792;iRNA_PseU:0 6638 chr12 112186239 112186239 1 + C T SKCM 112186239 + 112186219 112186259 41 GATACCCCAGGGATAAAAATCATCCGGCCTCTGACGGTGTA GATACCCCAGGGATAAAAATTATCCGGCCTCTGACGGTGTA Direct Gain 0 0.945473923057875 0 0.998137056827545 prediction 0.89094784611575 Functional Gain - ACAD10 ENSG00000111271 CDS Human protein_coding chr12:112186239 chr12:112186239 synonymous SNV . 0 21 hPsi_associated_SNPs_107678 0 0 1 0 1 Endoplasmic reticulum 0 0.43871859299542 0.99627411365509 0 hPsi_site_6638 iPseU_CNN:0.99627411365509;iRNA_PseU:0 6639 chrX 29959835 29959835 1 + G A UCEC 29959835 - 29959815 29959855 41 TTGTAACACTTGTAGATGGTCACCAAACATACAAGCAGCAA TTGTAACACTTGTAGATGGTTACCAAACATACAAGCAGCAA Direct Gain 0 0.945473632109306 0 0.999196887016296 prediction 0.890947264218611 Functional Gain - IL1RAPL1 ENSG00000169306 CDS Human protein_coding chrX:29959835 chrX:29959835 synonymous SNV . 0 21 hPsi_associated_SNPs_107679 0 0 0 0 0 exosome 0 0.438089464990971 0.998393774032592 0 hPsi_site_6639 iPseU_CNN:0.998393774032592;iRNA_PseU:0 6640 chr10 115348781 115348781 1 + C T UCEC 115348781 + 115348761 115348801 41 GACGTGCAGAATCTCAGTGGCATCTGGGTTCACCTCCCCAC GACGTGCAGAATCTCAGTGGTATCTGGGTTCACCTCCCCAC Direct Gain 0 0.945473265468285 0 0.99865448474884 prediction 0.890946530936571 Functional Gain - NRAP ENSG00000197893 CDS Human protein_coding chr10:115348781 chr10:115348781 nonsynonymous SNV 0.823 4 21 hPsi_associated_SNPs_107680 0 0 1 1 0 Cytosol 0 0.438718570885883 0.99730896949768 0 hPsi_site_6640 iPseU_CNN:0.99730896949768;iRNA_PseU:0 6641 chr8 59352268 59352268 1 + G A BLCA 59352268 - 59352248 59352288 41 CAATCTAGGTTTTATGTATTCTTGATCCTGATGATCCTCCA CAATCTAGGTTTTATGTATTTTTGATCCTGATGATCCTCCA Direct Gain 0 0.945462762593001 0 0.961507976055145 prediction 0.890925525186002 Functional Gain - UBXN2B ENSG00000215114 CDS Human protein_coding chr8:59352268 chr8:59352268 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107681 0 0 0 0 0 Cytosol 0 0.438718511241283 0.92301595211029 0 hPsi_site_6641 iPseU_CNN:0.92301595211029;iRNA_PseU:0 6642 chr19 30934982 30934982 1 + G T COAD 30934982 + 30934962 30935002 41 CACAGGGCGGCGCAGAAGGGGAACCTCAAGATTCACCTGCG CACAGGGCGGCGCAGAAGGGTAACCTCAAGATTCACCTGCG Direct Gain 0 0.945461926020999 0 0.999799311161041 prediction 0.890923852041999 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30934982 chr19:30934982 synonymous SNV . 0 21 hPsi_associated_SNPs_107682 0 0 1 0 0 exosome 0 0.438718593000039 0.999598622322082 0 hPsi_site_6642 iPseU_CNN:0.999598622322082;iRNA_PseU:0 6643 chr11 105623777 105623777 1 + G A LUSC 105623777 - 105623757 105623797 41 AAGGCGCTGCAGAATGAGGTCAAGGTATGTACCGACCTCTT AAGGCGCTGCAGAATGAGGTTAAGGTATGTACCGACCTCTT Direct Gain 0 0.945461689718073 0 0.478820621967316 prediction 0.890923379436145 Functional Gain - GRIA4 ENSG00000152578 CDS Human protein_coding chr11:105623777 chr11:105623777 synonymous SNV . 0 21 hPsi_associated_SNPs_107683 0 0 0 0 0 nucleoplasm 0 0.438718595441357 0 0 hPsi_site_6643 iPseU_CNN:0;iRNA_PseU:0 6644 chr19 51671096 51671096 1 + C A rs192787295 51671096 - 51671076 51671116 41 AATATTTGTAACTAAATTTTGTTCTTCCTCTCGCCACCCAA AATATTTGTAACTAAATTTTTTTCTTCCTCTCGCCACCCAA Direct Gain 0 0.945456616177153 0 0.473827630281448 prediction 0.890913232354306 Functional Gain - SIGLEC17P ENSG00000171101 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:51671096 chr19:51671096 . . 0 21 hPsi_associated_SNPs_107684 0 0 0 0 0 unknown 0 0.438719441824121 0 0 hPsi_site_6644 iPseU_CNN:0;iRNA_PseU:0 6645 chr2 26477304 26477304 1 + G A SKCM 26477304 - 26477284 26477324 41 GGGAGGAACAGCTCAGAGGTCTTATGGCTGGAAGACAAAAT GGGAGGAACAGCTCAGAGGTTTTATGGCTGGAAGACAAAAT Direct Gain 0 0.945456541574564 0 0.942854940891266 prediction 0.890913083149128 Functional Gain - HADHB ENSG00000138029 CDS Human protein_coding chr2:26477304 chr2:26477304 nonsynonymous SNV 0.841 2 21 hPsi_associated_SNPs_107685 0 0 1 0 0 Ribosome 0 0.438718704725103 0.885709881782532 0 hPsi_site_6645 iPseU_CNN:0.885709881782532;iRNA_PseU:0 6646 chr19 21365838 21365838 1 + C T UCEC 21365838 + 21365818 21365858 41 GGCAAAGCTTTTAAATGGTTCTCAACCCTTACTAGACACAA GGCAAAGCTTTTAAATGGTTTTCAACCCTTACTAGACACAA Direct Gain 0 0.945456060771068 0 0.969527900218964 prediction 0.890912121542137 Functional Gain - ZNF431 ENSG00000196705 CDS Human protein_coding chr19:21365838 chr19:21365838 synonymous SNV . 0 21 hPsi_associated_SNPs_107686 0 0 0 0 0 chromatin 0 0.438718644629462 0.939055800437928 0 hPsi_site_6646 iPseU_CNN:0.939055800437928;iRNA_PseU:0 6647 chr17 20156875 20156875 1 + G T LUSC 20156875 + 20156855 20156895 41 GAGGGGTGACTCAACGCTTGGACCTTCCTGACCTTCCCCTC GAGGGGTGACTCAACGCTTGTACCTTCCTGACCTTCCCCTC Direct Gain 0 0.945454580096949 0 0.999840259552002 prediction 0.890909160193899 Functional Gain - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20156875 chr17:20156875 nonsynonymous SNV 0.049 2 21 hPsi_associated_SNPs_107687 0 0 1 0 2 Cytosol 0 0.438718051696431 0.999680519104004 0 hPsi_site_6647 iPseU_CNN:0.999680519104004;iRNA_PseU:0 6648 chr6 88216123 88216123 1 + G T BRCA 88216123 + 88216103 88216143 41 GAACAAAATCCATTATTAGGGTTTGGCGCTATAGCTATTGC GAACAAAATCCATTATTAGGTTTTGGCGCTATAGCTATTGC Direct Gain 0 0.945452285532597 0 0.398694306612015 prediction 0.890904571065194 Functional Gain - SLC35A1 ENSG00000164414 CDS Human protein_coding chr6:88216123 chr6:88216123 synonymous SNV . 0 21 hPsi_associated_SNPs_107688 0 0 1 0 2 Endoplasmic reticulum 0 0.438631933756338 0 0 hPsi_site_6648 iPseU_CNN:0;iRNA_PseU:0 6649 chr9 104316369 104316369 1 + G A rs147900751 104316369 - 104316349 104316389 41 ACCTCTGCCTTAGACTTCTTCTCAGCTGCCATCAGCTGAAC ACCTCTGCCTTAGACTTCTTTTCAGCTGCCATCAGCTGAAC Direct Gain 0 0.945451951747094 0 0.222177296876907 prediction 0.890903903494187 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104316369 chr9:104316369 synonymous SNV . 0 21 hPsi_associated_SNPs_107689 0 0 0 0 0 nucleus 0 0.438723512373903 0 0 hPsi_site_6649 iPseU_CNN:0;iRNA_PseU:0 6650 chr10 37508232 37508232 1 + C A LIHC 37508232 - 37508212 37508252 41 AGAAGCCAGTCTAGGATGGTGTGATTCAATTTCTGCCTCTA AGAAGCCAGTCTAGGATGGTTTGATTCAATTTCTGCCTCTA Direct Gain 0 0.945447369994739 0 0.999974608421326 prediction 0.890894739989477 Functional Gain - ANKRD30A ENSG00000148513 CDS Human protein_coding chr10:37508232 chr10:37508232 nonsynonymous SNV 0.016 1 21 hPsi_associated_SNPs_107690 0 0 0 0 0 exosome 0 0.439083369169916 0.999949216842652 0 hPsi_site_6650 iPseU_CNN:0.999949216842652;iRNA_PseU:0 6651 chr17 29652871 29652871 1 + G T CESC 29652871 + 29652851 29652891 41 CAAATCAATGGTGATTTGCTGATATACCATGTCTTACTGAC CAAATCAATGGTGATTTGCTTATATACCATGTCTTACTGAC Direct Gain 0 0.945446682706876 0 0.99943745136261 prediction 0.890893365413752 Functional Gain - NF1 ENSG00000196712 CDS Human protein_coding chr17:29652871 chr17:29652871 synonymous SNV . 0 21 hPsi_associated_SNPs_107691 0 0 1 0 1 Nucleus 0 0.432024922712345 0.99887490272522 0 hPsi_site_6651 iPseU_CNN:0.99887490272522;iRNA_PseU:0 6652 chr22 44514968 44514968 1 + G A BLCA 44514968 - 44514948 44514988 41 AGGTCTTCCTCCAGCTGCTTCACAATGATCCTCTCCTCCAC AGGTCTTCCTCCAGCTGCTTTACAATGATCCTCTCCTCCAC Direct Gain 0 0.945438920504716 0 0.978337049484253 prediction 0.890877841009433 Functional Gain - PARVB ENSG00000188677 CDS Human protein_coding chr22:44514968 chr22:44514968 synonymous SNV . 0 21 hPsi_associated_SNPs_107692 0 0 0 0 0 Ribosome 0 0.438718904274357 0.956674098968506 0 hPsi_site_6652 iPseU_CNN:0.956674098968506;iRNA_PseU:0 6653 chr1 155912316 155912316 1 + G A CESC 155912316 - 155912296 155912336 41 CAGGGCACCAGGTCAAACTTCACCAGGACACCCCAGAGAGT CAGGGCACCAGGTCAAACTTTACCAGGACACCCCAGAGAGT Direct Gain 0 0.945434447147861 0 0.954419791698456 prediction 0.890868894295723 Functional Gain - RXFP4 ENSG00000173080 CDS Human protein_coding chr1:155912316 chr1:155912316 synonymous SNV . 0 21 hPsi_associated_SNPs_107693 0 0 0 0 0 exosome 0 0.438733633495107 0.908839583396912 0 hPsi_site_6653 iPseU_CNN:0.908839583396912;iRNA_PseU:0 6654 chr4 75938035 75938035 1 + C T HNSC 75938035 + 75938015 75938055 41 GCTGCTGAGCCTCCCACACTCATCTCCCCTCAAGCTCCAGC GCTGCTGAGCCTCCCACACTTATCTCCCCTCAAGCTCCAGC Direct Gain 0 0.94542620920904 0 0.96166729927063 prediction 0.890852418418079 Functional Gain - PARM1 ENSG00000169116 CDS Human protein_coding chr4:75938035 chr4:75938035 synonymous SNV . 0 21 hPsi_associated_SNPs_107694 0 0 1 0 0 exosome 0 0.438656191108931 0.92333459854126 0 hPsi_site_6654 iPseU_CNN:0.92333459854126;iRNA_PseU:0 6655 chr5 129070740 129070740 1 + C T HNSC 129070740 + 129070720 129070760 41 AAAACCTGCAGCATACAGGCCATGCCATCTTCAACCCTGCA AAAACCTGCAGCATACAGGCTATGCCATCTTCAACCCTGCA Direct Gain 0 0.945424286327989 0 0.950920701026917 prediction 0.890848572655977 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:129070740 chr5:129070740 nonsynonymous SNV 0.996 4 21 hPsi_associated_SNPs_107695 0 0 0 1 1 exosome 0 0.438799719974877 0.901841402053834 0 hPsi_site_6655 iPseU_CNN:0.901841402053834;iRNA_PseU:0 6656 chr4 188924123 188924123 1 + G A BLCA 188924123 - 188924103 188924143 41 TGAGGGCCAGGCTCATAGCACACATAGCCATCACATAAGGC TGAGGGCCAGGCTCATAGCATACATAGCCATCACATAAGGC Direct Gain 0 0.945419898981996 0 0.991773724555969 prediction 0.890839797963993 Functional Gain - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924123 chr4:188924123 synonymous SNV . 0 21 hPsi_associated_SNPs_107696 0 0 0 0 0 Nucleus 0 0.438902995718242 0.983547449111938 0 hPsi_site_6656 iPseU_CNN:0.983547449111938;iRNA_PseU:0 6657 chr1 113240703 113240703 1 + C T BRCA 113240703 + 113240683 113240723 41 GATGTCGTGGATCGAGAACGCTTCTGCCGCTGGGCGGGCCT GATGTCGTGGATCGAGAACGTTTCTGCCGCTGGGCGGGCCT Direct Gain 0 0.945419112664835 0 0.941972732543945 prediction 0.89083822532967 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113240703 chr1:113240703 synonymous SNV . 0 21 hPsi_associated_SNPs_107697 0 0 1 0 2 Cytosol 0 0.438718575783026 0.88394546508789 0 hPsi_site_6657 iPseU_CNN:0.88394546508789;iRNA_PseU:0 6658 chr10 38406470 38406470 1 + G T SKCM 38406470 + 38406450 38406490 41 GGAACAGCTTCTGGCTGAATGAAGACCTCATTTGGCATCAG GGAACAGCTTCTGGCTGAATTAAGACCTCATTTGGCATCAG Direct Gain 0 0.945417451820136 0 0.998212575912476 prediction 0.890834903640273 Functional Gain - ZNF37A ENSG00000075407 CDS Human protein_coding chr10:38406470 chr10:38406470 stopgain 0.706 0 21 hPsi_associated_SNPs_107698 0 0 0 0 0 Cytosol 0 0.438718876935068 0.996425151824952 0 hPsi_site_6658 iPseU_CNN:0.996425151824952;iRNA_PseU:0 6659 chr16 67290489 67290489 1 + C T UCEC 67290489 + 67290469 67290509 41 AGCTGTGCTGAGACCGTGATCTTCATGCTGCTTGGCATCTC AGCTGTGCTGAGACCGTGATTTTCATGCTGCTTGGCATCTC Direct Gain 0 0.945413408736496 0 0.772980809211731 prediction 0.890826817472992 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67290489 chr16:67290489 synonymous SNV . 0 21 hPsi_associated_SNPs_107699 0 0 0 0 0 Cytosol 0 0.438546733579924 0.545961618423462 0 hPsi_site_6659 iPseU_CNN:0.545961618423462;iRNA_PseU:0 6660 chr2 65298596 65298596 1 + G A rs148676857 65298596 - 65298576 65298616 41 TCGGAGGAAGAAAGCTTGGTCTTCTCCACCTGCAATGATCA TCGGAGGAAGAAAGCTTGGTTTTCTCCACCTGCAATGATCA Direct Gain 0 0.945410305773419 0 0.999927639961243 prediction 0.890820611546838 Functional Gain - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65298596 chr2:65298596 synonymous SNV . 0 21 hPsi_associated_SNPs_107700 0 0 0 0 0 Cytosol 0 0.438735285077744 0.999855279922486 0 hPsi_site_6660 iPseU_CNN:0.999855279922486;iRNA_PseU:0 6661 chr21 45842182 45842182 1 + C T UCEC 45842182 + 45842162 45842202 41 GGAGCTTTGGGGGTCAAGGACAAGCTCTGTCTGCAAATCTA GGAGCTTTGGGGGTCAAGGATAAGCTCTGTCTGCAAATCTA Direct Gain 0 0.945410135100445 0 0.999990940093994 prediction 0.89082027020089 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45842182 chr21:45842182 nonsynonymous SNV 0.009 0 21 hPsi_associated_SNPs_107701 0 0 0 0 1 Ribosome 0 0.438721091791789 0.999981880187988 0 hPsi_site_6661 iPseU_CNN:0.999981880187988;iRNA_PseU:0 6662 chr17 17699109 17699109 1 + G A BLCA 17699109 - 17699089 17699129 41 GGCCCCTCTTCACCTGGCTTCATGTGTGACAGAGAGGACTC GGCCCCTCTTCACCTGGCTTTATGTGTGACAGAGAGGACTC Direct Gain 0 0.945408411632532 0 0.94014310836792 prediction 0.890816823265063 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17699109 chr17:17699109 nonsynonymous SNV 0.982 1 21 hPsi_associated_SNPs_107702 0 0 0 0 0 chromatin 0 0.438720537813677 0.88028621673584 0 hPsi_site_6662 iPseU_CNN:0.88028621673584;iRNA_PseU:0 6663 chr1 154321623 154321623 1 + G A rs41310887 154321623 - 154321603 154321643 41 CCAGCCCTGGGTGCTCTGGTCACTGGCACAGGGCATCCATC CCAGCCCTGGGTGCTCTGGTTACTGGCACAGGGCATCCATC Direct Gain 0 0.945401189375386 0 0.999959707260132 prediction 0.890802378750773 Functional Gain - ATP8B2 ENSG00000143515 UTR3 Human protein_coding chr1:154321623 chr1:154321623 . . 0 21 hPsi_associated_SNPs_107703 0 0 0 0 0 chromatin 0 0.438730529796278 0.999919414520264 0 hPsi_site_6663 iPseU_CNN:0.999919414520264;iRNA_PseU:0 6664 chr20 57768596 57768596 1 + C T rs568828907 57768596 + 57768576 57768616 41 GCAACCAGAGCCTGTGAGCGCAGAGACCCCAGGTGGGCCCA GCAACCAGAGCCTGTGAGCGTAGAGACCCCAGGTGGGCCCA Direct Gain 0 0.945396679719545 0 0.0718650817871094 prediction 0.890793359439091 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57768596 chr20:57768596 nonsynonymous SNV 0.004 1 21 hPsi_associated_SNPs_107704 0 0 0 0 0 exosome 0 0.439271377979386 0 0 hPsi_site_6664 iPseU_CNN:0;iRNA_PseU:0 6665 chr8 142186798 142186798 1 + G A SKCM 142186798 - 142186778 142186818 41 CACCATCAGGTGCCAAAGGTCACACTCGGTTTTCAGGTTGG CACCATCAGGTGCCAAAGGTTACACTCGGTTTTCAGGTTGG Direct Gain 0 0.94539378221873 0 0.999991655349731 prediction 0.890787564437461 Functional Gain - DENND3 ENSG00000105339 CDS Human protein_coding chr8:142186798 chr8:142186798 nonsynonymous SNV 0.984 2 21 hPsi_associated_SNPs_107705 0 0 0 0 0 Nucleus 0 0.43871857321198 0.999983310699462 0 hPsi_site_6665 iPseU_CNN:0.999983310699462;iRNA_PseU:0 6666 chr3 127779007 127779007 1 + G T SKCM 127779007 + 127778987 127779027 41 TGATGACCGGGATGTATGGGGACCCTTCTGAAATGGGTGCT TGATGACCGGGATGTATGGGTACCCTTCTGAAATGGGTGCT Direct Gain 0 0.945392698808806 0 0.999999821186066 prediction 0.890785397617613 Functional Gain - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127779007 chr3:127779007 nonsynonymous SNV 0.979 2 21 hPsi_associated_SNPs_107706 0 0 1 0 2 Ribosome 0 0.438718593222801 0.999999642372132 0 hPsi_site_6666 iPseU_CNN:0.999999642372132;iRNA_PseU:0 6667 chr7 44247782 44247782 1 + G A SKCM 44247782 - 44247762 44247802 41 CTTACCAGAATGATTTTGGTCTCATCTAGTTCGGCCTGCAC CTTACCAGAATGATTTTGGTTTCATCTAGTTCGGCCTGCAC Direct Gain 0 0.945390671970589 0 0.535019993782043 prediction 0.890781343941178 Functional Gain - YKT6 ENSG00000106636 CDS Human protein_coding chr7:44247782 chr7:44247782 synonymous SNV . 0 21 hPsi_associated_SNPs_107707 0 0 0 0 0 Ribosome 0 0.438685290069062 0.070039987564086 0 hPsi_site_6667 iPseU_CNN:0.070039987564086;iRNA_PseU:0 6668 chr5 176079825 176079825 1 + G A STAD 176079825 - 176079805 176079845 41 GATGAAGAGGTTGAGCTGGTCTCGAATCCAGTCCTTGAAGA GATGAAGAGGTTGAGCTGGTTTCGAATCCAGTCCTTGAAGA Direct Gain 0 0.94538711569468 0 0.998530149459839 prediction 0.89077423138936 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176079825 chr5:176079825 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107708 0 0 0 0 0 Endoplasmic reticulum 0 0.438579255920067 0.997060298919678 0 hPsi_site_6668 iPseU_CNN:0.997060298919678;iRNA_PseU:0 6669 chr13 92051435 92051435 1 + C A LUSC 92051435 - 92051415 92051455 41 GGCGAATCCGGCAGCCCCCTGACAGCTCCCAGCAGCCGCCA GGCGAATCCGGCAGCCCCCTTACAGCTCCCAGCAGCCGCCA Direct Gain 0 0.945384185398841 0 0.999884724617004 prediction 0.890768370797682 Functional Gain - GPC5 ENSG00000179399 CDS Human protein_coding chr13:92051435 chr13:92051435 synonymous SNV . 0 21 hPsi_associated_SNPs_107709 0 0 0 0 0 Nucleus 0 0.438718593163307 0.999769449234008 0 hPsi_site_6669 iPseU_CNN:0.999769449234008;iRNA_PseU:0 6670 chr2 168102385 168102385 1 + G A SKCM 168102385 - 168102365 168102405 41 AGAATCGAAAGTTCGATTTTCAAAAAGCCACACAGCCTGCT AGAATCGAAAGTTCGATTTTTAAAAAGCCACACAGCCTGCT Direct Gain 0 0.945383705457882 0 0.00139164924621582 prediction 0.890767410915764 Functional Gain - XIRP2 ENSG00000163092 CDS Human protein_coding chr2:168102385 chr2:168102385 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107710 0 0 0 0 0 exosome 0 0.438718592995087 0 0 hPsi_site_6670 iPseU_CNN:0;iRNA_PseU:0 6671 chr11 88924512 88924512 1 + G A COAD 88924512 - 88924492 88924532 41 CATATTGGGTCAAACTCAGGCAAAATTCTACATCAGCTGAA CATATTGGGTCAAACTCAGGTAAAATTCTACATCAGCTGAA Direct Gain 0 0.945379091639933 0 6.65783882141113e-05 prediction 0.890758183279866 Functional Gain - TYR ENSG00000077498 CDS Human protein_coding chr11:88924512 chr11:88924512 nonsynonymous SNV 0.888 5 21 hPsi_associated_SNPs_107711 0 0 0 0 0 unknown 0 0.438718601530525 0 0 hPsi_site_6671 iPseU_CNN:0;iRNA_PseU:0 6672 chr1 11866322 11866322 1 + G A LIHC 11866322 - 11866302 11866342 41 AGAGACCCCCTGCACCCCGCCATCTTCCTCCTTTACTGCCA AGAGACCCCCTGCACCCCGCTATCTTCCTCCTTTACTGCCA Direct Gain 0 0.945375684336348 0 0.992336869239807 prediction 0.890751368672695 Functional Gain - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11866322 chr1:11866322 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107712 0 0 0 0 0 Endoplasmic reticulum 0 0.438718771665085 0.984673738479614 0 hPsi_site_6672 iPseU_CNN:0.984673738479614;iRNA_PseU:0 6673 chr12 18715824 18715824 1 + A T SARC 18715824 + 18715804 18715844 41 GGTTCAGCAAGAAATCCAGTAATGTAAGTTTAAAGTCCGTC GGTTCAGCAAGAAATCCAGTTATGTAAGTTTAAAGTCCGTC Direct Gain 0 0.945364110361733 0 0.810094714164734 prediction 0.890728220723466 Functional Gain - PIK3C2G ENSG00000139144 CDS Human protein_coding chr12:18715824 chr12:18715824 nonsynonymous SNV 0.355 0 21 hPsi_associated_SNPs_107713 0 0 0 1 1 exosome 0 0.438743223063333 0.620189428329468 0 hPsi_site_6673 iPseU_CNN:0.620189428329468;iRNA_PseU:0 6674 chr5 177468759 177468759 1 + C T BRCA 177468759 + 177468739 177468779 41 CTGAGGAAGCCACAGGGGTTCACATGGTAAAGTCGTCTTCT CTGAGGAAGCCACAGGGGTTTACATGGTAAAGTCGTCTTCT Direct Gain 0 0.945363563565795 0 0.623760461807251 prediction 0.890727127131589 Functional Gain - FAM153C ENSG00000204677 CDS Human protein_coding chr5:177468759 chr5:177468759 nonsynonymous SNV 0.225 0 21 hPsi_associated_SNPs_107714 0 0 0 0 2 exosome 0 0.438715798063689 0.247520923614502 0 hPsi_site_6674 iPseU_CNN:0.247520923614502;iRNA_PseU:0 6675 chr6 102247588 102247588 1 + G T COAD 102247588 + 102247568 102247608 41 GCCGTTCAACAGTTTCCCCAGATGACAGTCAGTTCCTTGCA GCCGTTCAACAGTTTCCCCATATGACAGTCAGTTCCTTGCA Direct Gain 0 0.945362285889866 0 0.645841240882874 prediction 0.890724571779732 Functional Gain - GRIK2 ENSG00000164418 CDS Human protein_coding chr6:102247588 chr6:102247588 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107715 0 0 0 0 2 exosome 0 0.439731818569747 0.291682481765748 0 hPsi_site_6675 iPseU_CNN:0.291682481765748;iRNA_PseU:0 6676 chr8 42027203 42027203 1 + G A rs34831543 42027203 - 42027183 42027223 41 TGGACTCAAATTTAAAAAGTCTCCAGTCCATTTCCAGAAGT TGGACTCAAATTTAAAAAGTTTCCAGTCCATTTCCAGAAGT Direct Gain 0 0.945361879715109 0 0.493488281965256 prediction 0.890723759430218 Functional Gain - AP3M2 ENSG00000070718 UTR3 Human protein_coding chr8:42027203 chr8:42027203 . . 0 21 hPsi_associated_SNPs_107716 0 0 0 0 0 Nucleus 0 0.438720345453564 0 0 hPsi_site_6676 iPseU_CNN:0;iRNA_PseU:0 6677 chr11 118183563 118183563 1 + C A UCEC 118183563 - 118183543 118183583 41 ACCTCTTGCCCTCAGGTAGAGATAAAAGTTCGCATCTTCTG ACCTCTTGCCCTCAGGTAGATATAAAAGTTCGCATCTTCTG Direct Gain 0 0.945361758814607 0 0.994334697723389 prediction 0.890723517629215 Functional Gain - CD3E ENSG00000198851 CDS Human protein_coding chr11:118183563 chr11:118183563 nonsynonymous SNV 0.324 4 21 hPsi_associated_SNPs_107717 0 0 0 0 0 exosome 0 0.43871848199559 0.988669395446778 0 hPsi_site_6677 iPseU_CNN:0.988669395446778;iRNA_PseU:0 6678 chr15 43820357 43820357 1 + C T OV 43820357 + 43820337 43820377 41 GGCCCCCAGCCTGGATTCCTCACTGCCCCAGCTCCCATCAC GGCCCCCAGCCTGGATTCCTTACTGCCCCAGCTCCCATCAC Direct Gain 0 0.945358340170149 0 0.970799922943115 prediction 0.890716680340297 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43820357 chr15:43820357 nonsynonymous SNV 0.794 2 21 hPsi_associated_SNPs_107718 0 0 0 0 0 nucleolus 0 0.438718633717892 0.94159984588623 0 hPsi_site_6678 iPseU_CNN:0.94159984588623;iRNA_PseU:0 6679 chr5 82808160 82808160 1 + G A LUAD 82808160 - 82808140 82808180 41 GGAGGGAAGCCTGTCTGGTTCTCAAAACGATACAGGGTTCT GGAGGGAAGCCTGTCTGGTTTTCAAAACGATACAGGGTTCT Direct Gain 0 0.945356903017109 0 0.987351775169373 prediction 0.890713806034217 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82808160 chr5:82808160 synonymous SNV . 0 21 hPsi_associated_SNPs_107719 0 0 0 0 0 Ribosome 0 0.438718592762832 0.974703550338746 0 hPsi_site_6679 iPseU_CNN:0.974703550338746;iRNA_PseU:0 6680 chr7 120971935 120971935 1 + G T UCEC 120971935 + 120971915 120971955 41 GGTTCAGCAGAAAGTTCCTAGATTTCCCCATCGGAAACACC GGTTCAGCAGAAAGTTCCTATATTTCCCCATCGGAAACACC Direct Gain 0 0.945354260788 0 0.646067976951599 prediction 0.890708521576 Functional Gain - WNT16 ENSG00000002745 CDS Human protein_coding chr7:120971935 chr7:120971935 nonsynonymous SNV 0.992 4 21 hPsi_associated_SNPs_107720 0 0 0 0 1 exosome 0 0.438718592119173 0.292135953903198 0 hPsi_site_6680 iPseU_CNN:0.292135953903198;iRNA_PseU:0 6681 chr5 180661176 180661176 1 + G T BLCA 180661176 + 180661156 180661196 41 TCCTCCCTCCCTCCCAAGTGGACCTGACGCTGGACCCTGAC TCCTCCCTCCCTCCCAAGTGTACCTGACGCTGGACCCTGAC Direct Gain 0 0.945349575515618 0 0.979276895523071 prediction 0.890699151031236 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180661176 chr5:180661176 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_107721 0 0 1 0 1 chromatin 0 0.438718593081175 0.958553791046142 0 hPsi_site_6681 iPseU_CNN:0.958553791046142;iRNA_PseU:0 6682 chr8 22939242 22939242 1 + A T rs184788006 22939242 + 22939222 22939262 41 AAAAAACTTTCTTATATTGTAAGCTCCTTCTATAGTGGTAT AAAAAACTTTCTTATATTGTTAGCTCCTTCTATAGTGGTAT Direct Gain 0 0.945349380023965 0 0.060523509979248 prediction 0.890698760047931 Functional Gain - LOC286059 ENSG00000246130 ncRNA_exonic Human antisense chr8:22939242 chr8:22939242 . . 0 21 hPsi_associated_SNPs_107722 0 0 0 3 0 unknown 0 0.438718592987776 0 0 hPsi_site_6682 iPseU_CNN:0;iRNA_PseU:0 6683 chr3 52453920 52453920 1 + C A UCEC 52453920 - 52453900 52453940 41 GCCCGGGCTGCCTCCTTTTTGATGTCTTCAGGCAGAAATCC GCCCGGGCTGCCTCCTTTTTTATGTCTTCAGGCAGAAATCC Direct Gain 0 0.945348406620376 0 0.580775260925293 prediction 0.890696813240752 Functional Gain - PHF7 ENSG00000010318 CDS Human protein_coding chr3:52453920 chr3:52453920 synonymous SNV 1.000 0 21 hPsi_associated_SNPs_107723 0 0 0 0 0 cytosol 0 0.438718603103254 0.161550521850586 0 hPsi_site_6683 iPseU_CNN:0.161550521850586;iRNA_PseU:0 6684 chr14 69787487 69787487 1 + G A STAD 69787487 - 69787467 69787507 41 TAGGGGTCCTCTCCAGCCTTCAGCTGCTTGGCCGACAGGTA TAGGGGTCCTCTCCAGCCTTTAGCTGCTTGGCCGACAGGTA Direct Gain 0 0.945348310081197 0 0.979580461978912 prediction 0.890696620162393 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69787487 chr14:69787487 synonymous SNV . 0 21 hPsi_associated_SNPs_107724 0 0 0 0 0 chromatin 0 0.438718591419838 0.959160923957824 0 hPsi_site_6684 iPseU_CNN:0.959160923957824;iRNA_PseU:0 6685 chr2 26953671 26953671 1 + G A rs1731257 26953671 - 26953651 26953691 41 AGGACAGGACCCTTCGAGGGCAGGGTCACACACAGGACAGA AGGACAGGACCCTTCGAGGGTAGGGTCACACACAGGACAGA Direct Gain 0 0.945347445016665 0 0.909566521644592 prediction 0.890694890033331 Functional Gain - KCNK3 ENSG00000171303 UTR3 Human protein_coding chr2:26953671 chr2:26953671 . . 0 21 hPsi_associated_SNPs_107725 0 0 0 0 0 Cytosol 0 0.438718592953339 0.819133043289184 0 hPsi_site_6685 iPseU_CNN:0.819133043289184;iRNA_PseU:0 6686 chr14 70177695 70177695 1 + G A OV 70177695 - 70177675 70177715 41 GAAAGGCTGGCCGCTGCCCTCATGCTTCTTTCAACAGTGGA GAAAGGCTGGCCGCTGCCCTTATGCTTCTTTCAACAGTGGA Direct Gain 0 0.945336096953066 0 0.999370872974396 prediction 0.890672193906133 Functional Gain - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70177695 chr14:70177695 synonymous SNV . 0 21 hPsi_associated_SNPs_107726 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592284556 0.998741745948792 0 hPsi_site_6686 iPseU_CNN:0.998741745948792;iRNA_PseU:0 6687 chr19 43329091 43329091 1 + T A rs190938394 43329091 - 43329071 43329111 41 AGGGCCACTTCTTTTCCTGGAATAATCTCTGTGAGGCAAAT AGGGCCACTTCTTTTCCTGGTATAATCTCTGTGAGGCAAAT Direct Gain 0 0.945336079492959 0 0.00181645154953003 prediction 0.890672158985919 Functional Gain - PSG8-AS1 ENSG00000225877 ncRNA_exonic Human lincRNA chr19:43329091 chr19:43329091 . . 0 21 hPsi_associated_SNPs_107727 0 0 0 0 0 unknown 0 0.438718427211387 0 0 hPsi_site_6687 iPseU_CNN:0;iRNA_PseU:0 6688 chr1 23357064 23357064 1 + C A OV 23357064 - 23357044 23357084 41 GGCTTGAGGGGGTGGTGGGGGAAGCTTCTTTTCCTTCTCTG GGCTTGAGGGGGTGGTGGGGTAAGCTTCTTTTCCTTCTCTG Direct Gain 0 0.945335412756001 0 0.999696731567383 prediction 0.890670825512001 Functional Gain - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23357064 chr1:23357064 nonsynonymous SNV 0.999 2 21 hPsi_associated_SNPs_107728 0 0 0 0 0 Cytosol 0 0.43871859539488 0.999393463134766 0 hPsi_site_6688 iPseU_CNN:0.999393463134766;iRNA_PseU:0 6689 chr1 26139180 26139180 1 + C A UCEC 26139180 - 26139160 26139200 41 TCAGTGAACGGCAAGTAGGAGACCTGGGGCCACACCGAGAC TCAGTGAACGGCAAGTAGGATACCTGGGGCCACACCGAGAC Direct Gain 0 0.945329243274661 0 0.999853014945984 prediction 0.890658486549321 Functional Gain - SELENON ENSG00000162430 CDS Human protein_coding chr1:26139180 chr1:26139180 synonymous SNV . 0 21 hPsi_associated_SNPs_107729 0 0 0 0 0 unknown 0 0.438718578603343 0.999706029891968 0 hPsi_site_6689 iPseU_CNN:0.999706029891968;iRNA_PseU:0 6690 chr14 102912183 102912183 1 + G T THYM 102912183 + 102912163 102912203 41 CCGTCTGCATAACGCTCGGGGATCAGCAGACTCTCTGGGCC CCGTCTGCATAACGCTCGGGTATCAGCAGACTCTCTGGGCC Direct Gain 0 0.945327833222558 0 0.999998927116394 prediction 0.890655666445116 Functional Gain - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102912183 chr14:102912183 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_107730 0 0 0 0 1 Cytosol 0 0.438718609581758 0.999997854232788 0 hPsi_site_6690 iPseU_CNN:0.999997854232788;iRNA_PseU:0 6691 chr1 161681008 161681008 1 + C A LUAD 161681008 - 161680988 161681028 41 GGCTTGGCTGGACCTTGGAGGATCAGCCAGTCTATGGTCCA GGCTTGGCTGGACCTTGGAGTATCAGCCAGTCTATGGTCCA Direct Gain 0 0.945321256754386 0 0.997401356697083 prediction 0.890642513508773 Functional Gain - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681008 chr1:161681008 synonymous SNV . 0 21 hPsi_associated_SNPs_107731 0 0 0 0 0 Endoplasmic reticulum 0 0.438713154232626 0.994802713394166 0 hPsi_site_6691 iPseU_CNN:0.994802713394166;iRNA_PseU:0 6692 chrX 102004502 102004502 1 + G A BLCA 102004502 - 102004482 102004522 41 TGAGGCTTAACTATCCTGCTCACAGGTTTAGGATTAGGGTC TGAGGCTTAACTATCCTGCTTACAGGTTTAGGATTAGGGTC Direct Gain 0 0.945319964665713 0 0.998576879501343 prediction 0.890639929331426 Functional Gain - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102004502 chrX:102004502 synonymous SNV . 0 21 hPsi_associated_SNPs_107732 0 0 0 0 0 unknown 0 0.43871477690576 0.997153759002686 0 hPsi_site_6692 iPseU_CNN:0.997153759002686;iRNA_PseU:0 6693 chr11 35253216 35253216 1 + G A rs115718630 35253216 - 35253196 35253236 41 AGATCAAGGGAGTGAGAATACATCTTATTCCATAAACTTCA AGATCAAGGGAGTGAGAATATATCTTATTCCATAAACTTCA Direct Gain 0 0.945319489267069 0 0.998775839805603 prediction 0.890638978534138 Functional Gain - CD44 ENSG00000026508 UTR3 Human protein_coding chr11:35253216 chr11:35253216 . . 0 21 hPsi_associated_SNPs_107733 0 0 0 0 0 Nucleus 0 0.438730996102995 0.997551679611206 0 hPsi_site_6693 iPseU_CNN:0.997551679611206;iRNA_PseU:0 6694 chr17 17380536 17380536 1 + G A BLCA 17380536 - 17380516 17380556 41 AGGTAAAAAGGAGTAGTTCTCTTCCTCCCTCGCGCGGGCAG AGGTAAAAAGGAGTAGTTCTTTTCCTCCCTCGCGCGGGCAG Direct Gain 0 0.945317126027052 0 0.98016631603241 prediction 0.890634252054104 Functional Gain - MED9 ENSG00000141026 CDS Human protein_coding chr17:17380536 chr17:17380536 nonsynonymous SNV 0.990 3 21 hPsi_associated_SNPs_107734 0 0 0 0 0 Ribosome 0 0.443432273619447 0.96033263206482 0 hPsi_site_6694 iPseU_CNN:0.96033263206482;iRNA_PseU:0 6695 chr2 168099113 168099113 1 + C A UCEC 168099113 - 168099093 168099133 41 AAGAGGTACTCACAACTGATGATGGCTTGAAAGTCTCTTCA AAGAGGTACTCACAACTGATTATGGCTTGAAAGTCTCTTCA Direct Gain 0 0.945313234404404 0 0.999933242797852 prediction 0.890626468808807 Functional Gain - XIRP2 ENSG00000163092 CDS Human protein_coding chr2:168099113 chr2:168099113 stopgain 0.657 0 21 hPsi_associated_SNPs_107735 0 0 0 0 0 exosome 0 0.438731990098878 0.999866485595704 0 hPsi_site_6695 iPseU_CNN:0.999866485595704;iRNA_PseU:0 6696 chr2 108905328 108905328 1 + T A rs17036048 108905328 - 108905308 108905348 41 GAAGTTGAAGCTTTTACTGGAAGAATCCGGATTGAACAGAA GAAGTTGAAGCTTTTACTGGTAGAATCCGGATTGAACAGAA Direct Gain 0 0.945309547559196 0 0.415858745574951 prediction 0.890619095118391 Functional Gain - SULT1C2 ENSG00000198203 UTR5 Human protein_coding chr2:108905328 chr2:108905328 . . 0 21 hPsi_associated_SNPs_107736 0 0 0 0 0 exosome 0 0.438718592379949 0 0 hPsi_site_6696 iPseU_CNN:0;iRNA_PseU:0 6697 chr18 56400658 56400658 1 + G A STAD 56400658 - 56400638 56400678 41 GAAGCTGTTCCCAAAATTTTCATAACCATGTCCTGCATAAT GAAGCTGTTCCCAAAATTTTTATAACCATGTCCTGCATAAT Direct Gain 0 0.945305386682482 0 0.020810455083847 prediction 0.890610773364964 Functional Gain - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56400658 chr18:56400658 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107737 0 0 0 0 0 Nucleus 0 0.438718592994955 0 0 hPsi_site_6697 iPseU_CNN:0;iRNA_PseU:0 6698 chr11 69978115 69978115 1 + C T SKCM 69978115 + 69978095 69978135 41 AAGATGAGCTCAGCCTGCGCCACGGCCCGCGCCAGCCACCT AAGATGAGCTCAGCCTGCGCTACGGCCCGCGCCAGCCACCT Direct Gain 0 0.945302287350083 0 0.997544884681702 prediction 0.890604574700167 Functional Gain - ANO1 ENSG00000131620 CDS Human protein_coding chr11:69978115 chr11:69978115 synonymous SNV . 0 21 hPsi_associated_SNPs_107738 0 0 0 0 2 Cytosol 0 0.438718582233632 0.995089769363404 0 hPsi_site_6698 iPseU_CNN:0.995089769363404;iRNA_PseU:0 6699 chr7 100086413 100086413 1 + C T LUAD 100086413 + 100086393 100086433 41 CTGGCGATGGGGTCTCAAGGCTACCTGTCCTCTGCCACTCC CTGGCGATGGGGTCTCAAGGTTACCTGTCCTCTGCCACTCC Direct Gain 0 0.945301093317843 0 0.894424676895142 prediction 0.890602186635686 Functional Gain - NYAP1 ENSG00000166924 CDS Human protein_coding chr7:100086413 chr7:100086413 synonymous SNV . 0 21 hPsi_associated_SNPs_107739 0 0 0 0 0 nucleolus 0 0.438718593992886 0.788849353790284 0 hPsi_site_6699 iPseU_CNN:0.788849353790284;iRNA_PseU:0 6700 chr16 53503923 53503923 1 + G A CESC 53503923 - 53503903 53503943 41 GCGCCCAGGCGTCCCTCCATCAGAGGGGCTATCATTCTCAA GCGCCCAGGCGTCCCTCCATTAGAGGGGCTATCATTCTCAA Direct Gain 0 0.945299752116327 0 0.820693492889404 prediction 0.890599504232654 Functional Gain - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53503923 chr16:53503923 nonsynonymous SNV 0.998 1 21 hPsi_associated_SNPs_107740 0 0 0 0 0 Ribosome 0 0.438718592714253 0.641386985778808 0 hPsi_site_6700 iPseU_CNN:0.641386985778808;iRNA_PseU:0 6701 chr11 5969053 5969053 1 + G A BLCA 5969053 - 5969033 5969073 41 AGGATGGGGATGGGCAGAGTCATAAGCACATTTCTGGTCAA AGGATGGGGATGGGCAGAGTTATAAGCACATTTCTGGTCAA Direct Gain 0 0.945295724195548 0 0.999608874320984 prediction 0.890591448391095 Functional Gain - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5969053 chr11:5969053 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107741 0 0 0 0 0 unknown 0 0.438662215752318 0.999217748641968 0 hPsi_site_6701 iPseU_CNN:0.999217748641968;iRNA_PseU:0 6702 chrX 47034420 47034420 1 + C T HNSC 47034420 + 47034400 47034440 41 TCTGAATGCTGTCTCCAGGTCAGAGCCGGGGCTTCGCCTTC TCTGAATGCTGTCTCCAGGTTAGAGCCGGGGCTTCGCCTTC Direct Gain 0 0.945295313215939 0 0.999979496002197 prediction 0.890590626431878 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47034420 chrX:47034420 stopgain 1.000 1 21 hPsi_associated_SNPs_107742 0 0 1 0 2 Ribosome 0 0.438840986886629 0.999958992004394 0 hPsi_site_6702 iPseU_CNN:0.999958992004394;iRNA_PseU:0 6703 chr1 201178710 201178710 1 + G A KIRC 201178710 - 201178690 201178730 41 AAATCCTTCCTATAACCTGCCTTATTCACTGACCCCATTTC AAATCCTTCCTATAACCTGCTTTATTCACTGACCCCATTTC Direct Gain 0 0.945289439163874 0 0.580781817436218 prediction 0.890578878327747 Functional Gain - IGFN1 ENSG00000163395 CDS Human protein_coding chr1:201178710 chr1:201178710 synonymous SNV . 0 21 hPsi_associated_SNPs_107743 0 0 0 0 0 exosome 0 0.438717876976994 0.161563634872436 0 hPsi_site_6703 iPseU_CNN:0.161563634872436;iRNA_PseU:0 6704 chr12 64616172 64616172 1 + G A rs565814547 64616172 - 64616152 64616192 41 GGCCCTTATCCGCGTCTTCTCTAAGGCCCAGGAGCGGTCCC GGCCCTTATCCGCGTCTTCTTTAAGGCCCAGGAGCGGTCCC Direct Gain 0 0.945289215616813 0 0.999573647975922 prediction 0.890578431233626 Functional Gain - C12orf66 ENSG00000243024 ncRNA_exonic Human transcribed_processed_pseudogene chr12:64616172 chr12:64616172 . . 0 21 hPsi_associated_SNPs_107744 0 0 0 0 0 nucleus 0 0.43871859299509 0.999147295951844 0 hPsi_site_6704 iPseU_CNN:0.999147295951844;iRNA_PseU:0 6705 chr5 140229706 140229706 1 + G A UCEC 140229706 - 140229686 140229726 41 ACGTTGCTGCCCAGAGGCGGCACGCCCGCGTCGCGCGCGCT ACGTTGCTGCCCAGAGGCGGTACGCCCGCGTCGCGCGCGCT Direct Gain 0 0.945288128281602 0 0.997175276279449 prediction 0.890576256563204 Functional Gain - PCDHA9 ENSG00000204961 CDS Human protein_coding chr5:140229706 chr5:140229706 synonymous SNV . 0 21 hPsi_associated_SNPs_107745 0 0 0 0 0 Nucleus 0 0.440206748066398 0.994350552558898 0 hPsi_site_6705 iPseU_CNN:0.994350552558898;iRNA_PseU:0 6706 chr12 56030921 56030921 1 + G A rs7305623 56030921 - 56030901 56030941 41 TGCGGGGAGCCCAGATTGGCCAGGGTCCTGGGCACGATGTC TGCGGGGAGCCCAGATTGGCTAGGGTCCTGGGCACGATGTC Direct Gain 0 0.945286309227916 0 0.990638732910156 prediction 0.890572618455832 Functional Gain - OR10P1 ENSG00000175398 CDS Human protein_coding chr12:56030921 chr12:56030921 synonymous SNV . 0 21 hPsi_associated_SNPs_107746 0 0 0 0 0 exosome 0 0.438715044932465 0.981277465820312 0 hPsi_site_6706 iPseU_CNN:0.981277465820312;iRNA_PseU:0 6707 chrX 140926144 140926144 1 + G T UCEC 140926144 + 140926124 140926164 41 TGTTGGATGCCACCTTCAGTGATGGCAGTCTAGGCCAGTGG TGTTGGATGCCACCTTCAGTTATGGCAGTCTAGGCCAGTGG Direct Gain 0 0.945274626489334 0 0.585696339607239 prediction 0.890549252978668 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140926144 chrX:140926144 nonsynonymous SNV 0.002 2 21 hPsi_associated_SNPs_107747 0 0 0 0 1 exosome 0 0.438829329716177 0.171392679214478 0 hPsi_site_6707 iPseU_CNN:0.171392679214478;iRNA_PseU:0 6708 chr17 72346937 72346937 1 + G A OV 72346937 - 72346917 72346957 41 TGGTTGGTCATCACCTGTGTCTGAGTCCTTCTCGCTGTCGT TGGTTGGTCATCACCTGTGTTTGAGTCCTTCTCGCTGTCGT Direct Gain 0 0.945270544933823 0 0.617687582969666 prediction 0.890541089867647 Functional Gain - KIF19 ENSG00000196169;ENSG00000268626 CDS Human other chr17:72346937 chr17:72346937 nonsynonymous SNV 0.986 0 21 hPsi_associated_SNPs_107748 0 0 0 0 0 exosome 0 0.430556122730505 0.235375165939332 0 hPsi_site_6708 iPseU_CNN:0.235375165939332;iRNA_PseU:0 6709 chr14 24532014 24532014 1 + G A BLCA 24532014 - 24531994 24532034 41 ATCTGTGGTCTCCTCATGGTCATGGTTCCGGCCTCGGCCCC ATCTGTGGTCTCCTCATGGTTATGGTTCCGGCCTCGGCCCC Direct Gain 0 0.945270422287692 0 0.999998569488525 prediction 0.890540844575384 Functional Gain - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24532014 chr14:24532014 nonsynonymous SNV 0.988 0 21 hPsi_associated_SNPs_107749 0 0 0 0 0 Endoplasmic reticulum 0 0.438720543153125 0.99999713897705 0 hPsi_site_6709 iPseU_CNN:0.99999713897705;iRNA_PseU:0 6710 chr2 73679923 73679923 1 + C A COAD 73679923 - 73679903 73679943 41 GAAAATAAGAACTAGAGAGAGATACTGGTTTTCCAGTATTC GAAAATAAGAACTAGAGAGATATACTGGTTTTCCAGTATTC Direct Gain 0 0.945266114033926 0 0.920107483863831 prediction 0.890532228067852 Functional Gain - ALMS1 ENSG00000116127 CDS Human protein_coding chr2:73679923 chr2:73679923 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107750 0 0 0 0 0 Nucleus 0 0.441273107262598 0.840214967727662 0 hPsi_site_6710 iPseU_CNN:0.840214967727662;iRNA_PseU:0 6711 chr18 20715894 20715894 1 + C T rs576585763 20715894 + 20715874 20715914 41 GAACCCCCCCGGAAGCCGCGCATGGACCCGCGGCGCCGCCA GAACCCCCCCGGAAGCCGCGTATGGACCCGCGGCGCCGCCA Direct Gain 0 0.945262125738965 0 0.999919772148132 prediction 0.89052425147793 Functional Gain - CABLES1 ENSG00000134508 CDS Human protein_coding chr18:20715894 chr18:20715894 synonymous SNV . 0 21 hPsi_associated_SNPs_107751 0 0 0 0 0 chromatin 0 0.438717198662353 0.999839544296264 0 hPsi_site_6711 iPseU_CNN:0.999839544296264;iRNA_PseU:0 6712 chr17 4439611 4439611 1 + G A READ 4439611 - 4439591 4439631 41 ATGAGCGCGTAGCCCAGGCTCAGGAACTCCCAGAGCGGGGA ATGAGCGCGTAGCCCAGGCTTAGGAACTCCCAGAGCGGGGA Direct Gain 0 0.945261047204344 0 0.998465299606323 prediction 0.890522094408688 Functional Gain - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4439611 chr17:4439611 synonymous SNV . 0 21 hPsi_associated_SNPs_107752 0 0 1 0 0 Ribosome 0 0.438709105151642 0.996930599212646 0 hPsi_site_6712 iPseU_CNN:0.996930599212646;iRNA_PseU:0 6713 chr16 86612809 86612809 1 + G A BLCA 86612809 - 86612789 86612829 41 TCCGCGCTGCGCTGGTGCGTCTCGGCGCGGGGCCTCTTGGC TCCGCGCTGCGCTGGTGCGTTTCGGCGCGGGGCCTCTTGGC Direct Gain 0 0.945255488183743 0 0.999472737312317 prediction 0.890510976367486 Functional Gain - FOXL1 ENSG00000176678 CDS Human protein_coding chr16:86612809 chr16:86612809 synonymous SNV . 0 21 hPsi_associated_SNPs_107753 0 0 0 0 0 exosome 0 0.4387213554997 0.998945474624634 0 hPsi_site_6713 iPseU_CNN:0.998945474624634;iRNA_PseU:0 6714 chr1 236914838 236914838 1 + C A ESCA 236914838 - 236914818 236914858 41 ACCTCGTTCTGGATGGCCATGATGGACTGCCGCTCTCCGTC ACCTCGTTCTGGATGGCCATTATGGACTGCCGCTCTCCGTC Direct Gain 0 0.945253458201304 0 0.975385427474976 prediction 0.890506916402608 Functional Gain - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236914838 chr1:236914838 synonymous SNV . 0 21 hPsi_associated_SNPs_107754 0 0 0 0 0 chromatin 0 0.438718695570239 0.950770854949952 0 hPsi_site_6714 iPseU_CNN:0.950770854949952;iRNA_PseU:0 6715 chr1 206224495 206224495 1 + G A OV 206224495 - 206224475 206224515 41 GGGTGTTGTGGCATTGGGGGCAGAGAGGGTGCCCCGAGGGG GGGTGTTGTGGCATTGGGGGTAGAGAGGGTGCCCCGAGGGG Direct Gain 0 0.945249202869371 0 0.10769322514534 prediction 0.890498405738742 Functional Gain - AVPR1B ENSG00000198049 CDS Human protein_coding chr1:206224495 chr1:206224495 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107755 0 0 0 0 0 unknown 0 0.439226886851334 0 0 hPsi_site_6715 iPseU_CNN:0;iRNA_PseU:0 6716 chr8 117783742 117783742 1 + C T SARC 117783742 + 117783722 117783762 41 AAGAAGCCTGGAGTTCCTCTCATGTTTATTATTCAGAACAC AAGAAGCCTGGAGTTCCTCTTATGTTTATTATTCAGAACAC Direct Gain 0 0.945244968608939 0 0.98088550567627 prediction 0.890489937217878 Functional Gain - UTP23 ENSG00000147679 CDS Human protein_coding chr8:117783742 chr8:117783742 synonymous SNV . 0 21 hPsi_associated_SNPs_107756 0 0 1 0 1 chromatin 0 0.438554282831999 0.96177101135254 0 hPsi_site_6716 iPseU_CNN:0.96177101135254;iRNA_PseU:0 6717 chr11 4567270 4567270 1 + C A UCEC 4567270 - 4567250 4567290 41 GAGGATTGGAGGAATGAGGAGATAGAAGTTGGCCAGCAGAG GAGGATTGGAGGAATGAGGATATAGAAGTTGGCCAGCAGAG Direct Gain 0 0.945244011608092 0 0.118535310029984 prediction 0.890488023216183 Functional Gain - OR52M1 ENSG00000197790 CDS Human protein_coding chr11:4567270 chr11:4567270 nonsynonymous SNV 0.995 3 21 hPsi_associated_SNPs_107757 0 0 0 0 0 unknown 0 0.438720580392991 0 0 hPsi_site_6717 iPseU_CNN:0;iRNA_PseU:0 6718 chr2 187559115 187559115 1 + C T UCEC 187559115 + 187559095 187559135 41 GAGGACAGAGGTGCCTGGGGCAACCTCCACCTTGACGGTTC GAGGACAGAGGTGCCTGGGGTAACCTCCACCTTGACGGTTC Direct Gain 0 0.945234671565231 0 0.96675181388855 prediction 0.890469343130462 Functional Gain - FAM171B ENSG00000144369 CDS Human protein_coding chr2:187559115 chr2:187559115 nonsynonymous SNV 0.737 0 21 hPsi_associated_SNPs_107758 0 0 0 0 1 nucleoplasm 0 0.438710064140579 0.9335036277771 0 hPsi_site_6718 iPseU_CNN:0.9335036277771;iRNA_PseU:0 6719 chr16 27078259 27078259 1 + C T rs189643053 27078259 + 27078239 27078279 41 GGCAGCCTTATATACGGAGTCACCTCTCCCCAGAGAGGTCA GGCAGCCTTATATACGGAGTTACCTCTCCCCAGAGAGGTCA Direct Gain 0 0.945233193688609 0 0.985096633434296 prediction 0.890466387377219 Functional Gain - C16orf82 ENSG00000234186;ENSG00000261482 ncRNA_exonic Human other chr16:27078259 chr16:27078259 . . 0 21 hPsi_associated_SNPs_107759 0 0 0 0 0 unknown 0 0.438634757541274 0.970193266868592 0 hPsi_site_6719 iPseU_CNN:0.970193266868592;iRNA_PseU:0 6720 chr17 75495449 75495449 1 + C T rs146084702 75495449 + 75495429 75495469 41 AGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCC AGGCGTCTTCATCTCCCTGCTATCCCCCTCTCACGCCACCC Direct Gain 0 0.94523314551852 0 0.999888300895691 prediction 0.890466291037041 Functional Gain - SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75495449 chr17:75495449 . . 0 21 hPsi_associated_SNPs_107760 1 0 1 0 0 Ribosome 0 0.438715329254182 0.999776601791382 0 hPsi_site_6720 iPseU_CNN:0.999776601791382;iRNA_PseU:0 6721 chr16 71570851 71570851 1 + C T KIRC 71570851 + 71570831 71570871 41 AGAGCACCGCCTGGATGCTGCACATGGCTGTGCGGGATCTG AGAGCACCGCCTGGATGCTGTACATGGCTGTGCGGGATCTG Direct Gain 0 0.945229118963516 0 0.999987721443176 prediction 0.890458237927032 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71570851 chr16:71570851 nonsynonymous SNV 0.476 4 21 hPsi_associated_SNPs_107761 0 0 0 0 0 exosome 0 0.438986960212373 0.999975442886352 0 hPsi_site_6721 iPseU_CNN:0.999975442886352;iRNA_PseU:0 6722 chr13 32745282 32745282 1 + G A STAD 32745282 - 32745262 32745302 41 AAGGAGTGTGTGATGCATATCATTTACTTCCCGGAGCAGGA AAGGAGTGTGTGATGCATATTATTTACTTCCCGGAGCAGGA Direct Gain 0 0.94522851015035 0 0.991128087043762 prediction 0.8904570203007 Functional Gain - FRY ENSG00000073910 CDS Human protein_coding chr13:32745282 chr13:32745282 nonsynonymous SNV 0.988 3 21 hPsi_associated_SNPs_107762 0 0 0 0 0 cytosol 0 0.438695509943956 0.982256174087524 0 hPsi_site_6722 iPseU_CNN:0.982256174087524;iRNA_PseU:0 6723 chr16 30767796 30767796 1 + C T BLCA 30767796 + 30767776 30767816 41 ATGGAGGGCCAGTACCAGTTCAGTTCCCCCGAGTGGGATGA ATGGAGGGCCAGTACCAGTTTAGTTCCCCCGAGTGGGATGA Direct Gain 0 0.945225604286488 0 0.279818147420883 prediction 0.890451208572976 Functional Gain - PHKG2 ENSG00000156873 CDS Human protein_coding chr16:30767796 chr16:30767796 synonymous SNV . 0 21 hPsi_associated_SNPs_107763 0 0 1 0 1 Ribosome 0 0.438718580636653 0 0 hPsi_site_6723 iPseU_CNN:0;iRNA_PseU:0 6724 chrX 34960988 34960988 1 + G A BLCA 34960988 - 34960968 34961008 41 CCAGGGCTTGGAGTCCATGCCTTGGGACCTTGGCCGGTCCT CCAGGGCTTGGAGTCCATGCTTTGGGACCTTGGCCGGTCCT Direct Gain 0 0.945223213557713 0 0.967060089111328 prediction 0.890446427115426 Functional Gain - FAM47B ENSG00000189132 CDS Human protein_coding chrX:34960988 chrX:34960988 nonsynonymous SNV 0.004 3 21 hPsi_associated_SNPs_107764 0 0 0 0 0 unknown 0 0.438718455532266 0.934120178222656 0 hPsi_site_6724 iPseU_CNN:0.934120178222656;iRNA_PseU:0 6725 chr17 77082213 77082213 1 + G T SARC 77082213 + 77082193 77082233 41 GCTGGGGAGGGATGAGTGATGACTCTCCGGGCAGGGAGCTG GCTGGGGAGGGATGAGTGATTACTCTCCGGGCAGGGAGCTG Direct Gain 0 0.945216970404297 0 0.814318358898163 prediction 0.890433940808595 Functional Gain - ENGASE ENSG00000167280 CDS Human protein_coding chr17:77082213 chr17:77082213 nonsynonymous SNV 0.000 0 21 hPsi_associated_SNPs_107765 0 0 1 0 0 chromatin 0 0.43871045706053 0.628636717796326 0 hPsi_site_6725 iPseU_CNN:0.628636717796326;iRNA_PseU:0 6726 chr11 126160834 126160834 1 + G A UCEC 126160834 - 126160814 126160854 41 GCCATCTTGCCTAGAGGCTTCTTAGGCCGAGAGCCAGGAGC GCCATCTTGCCTAGAGGCTTTTTAGGCCGAGAGCCAGGAGC Direct Gain 0 0.945213404003366 0 0.293451368808746 prediction 0.890426808006732 Functional Gain - TIRAP ENSG00000150455 CDS Human protein_coding chr11:126160834 chr11:126160834 synonymous SNV . 0 21 hPsi_associated_SNPs_107766 0 0 0 0 0 exosome 0 0.438721939219826 0 0 hPsi_site_6726 iPseU_CNN:0;iRNA_PseU:0 6727 chr13 26594631 26594631 1 + C T rs191109924 26594631 + 26594611 26594651 41 TGTTTTGTGTGTAAAATTGGCATAAACTTCTTGATTGCAGT TGTTTTGTGTGTAAAATTGGTATAAACTTCTTGATTGCAGT Direct Gain 0 0.945209865373549 0 0.0735078752040863 prediction 0.890419730747099 Functional Gain - ATP8A2 ENSG00000132932 UTR3 Human protein_coding chr13:26594631 chr13:26594631 . . 0 21 hPsi_associated_SNPs_107767 0 0 0 1 0 unknown 0 0.438664614595903 0 0 hPsi_site_6727 iPseU_CNN:0;iRNA_PseU:0 6728 chr3 186295492 186295492 1 + C A OV 186295492 - 186295472 186295512 41 TTCTGTCTTGCTGACGAGGGGTTCCTCCAAACATGAAACCA TTCTGTCTTGCTGACGAGGGTTTCCTCCAAACATGAAACCA Direct Gain 0 0.945208227602853 0 0.969976663589478 prediction 0.890416455205706 Functional Gain - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186295492 chr3:186295492 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107768 0 0 0 0 0 Ribosome 0 0.438704767530787 0.939953327178956 0 hPsi_site_6728 iPseU_CNN:0.939953327178956;iRNA_PseU:0 6729 chr16 67916846 67916846 1 + C T rs368533752 67916846 + 67916826 67916866 41 CCTGTCCACTTCACCTCACTCACTTCCCTTTGCAGCCTGCA CCTGTCCACTTCACCTCACTTACTTCCCTTTGCAGCCTGCA Direct Gain 0 0.945207844761957 0 0.999291598796844 prediction 0.890415689523914 Functional Gain - EDC4 ENSG00000263126 ncRNA_exonic Human lincRNA chr16:67916846 chr16:67916846 . . 0 21 hPsi_associated_SNPs_107769 0 0 1 0 0 Cytosol 0 0.438718442860752 0.998583197593688 0 hPsi_site_6729 iPseU_CNN:0.998583197593688;iRNA_PseU:0 6730 chr2 27264458 27264458 1 + G A rs550128220 27264458 - 27264438 27264478 41 GGTTCCCTGGGCCCAAGGCACACAACTGCCTGTGCTCTGCT GGTTCCCTGGGCCCAAGGCATACAACTGCCTGTGCTCTGCT Direct Gain 0 0.945206640152715 0 0.00327074527740479 prediction 0.890413280305429 Functional Gain - TMEM214 ENSG00000119777 UTR3 Human protein_coding chr2:27264458 chr2:27264458 . . 0 21 hPsi_associated_SNPs_107770 0 0 0 0 0 Ribosome 0 0.438718592995102 0 0 hPsi_site_6730 iPseU_CNN:0;iRNA_PseU:0 6731 chr21 45716269 45716269 1 + G A rs145370269 45716269 - 45716249 45716289 41 GGGCTCGTGACTGGCAGTGTCATCCTGGAACCCAGTAAAGA GGGCTCGTGACTGGCAGTGTTATCCTGGAACCCAGTAAAGA Direct Gain 0 0.945202554730075 0 0.37169349193573 prediction 0.89040510946015 Functional Gain - AIRE ENSG00000160224 CDS Human protein_coding chr21:45716269 chr21:45716269 nonsynonymous SNV 0.002 1 21 hPsi_associated_SNPs_107771 0 0 0 0 0 exosome 0 0.438680380043394 0 0 hPsi_site_6731 iPseU_CNN:0;iRNA_PseU:0 6732 chr22 42392811 42392811 1 + G A rs1062753 42392811 - 42392791 42392831 41 GGGAGGCTCAGATCATGGTTCAGGGGTGCCAGGCACCATTC GGGAGGCTCAGATCATGGTTTAGGGGTGCCAGGCACCATTC Direct Gain 0 0.945202433525496 0 0.777408123016357 prediction 0.890404867050992 Functional Gain - SEPT3 ENSG00000100167 UTR3 Human protein_coding chr22:42392811 chr22:42392811 . . 0 21 hPsi_associated_SNPs_107772 0 1 0 0 0 exosome 0 0.438680601237749 0.554816246032714 0 hPsi_site_6732 iPseU_CNN:0.554816246032714;iRNA_PseU:0 6733 chr17 42854934 42854934 1 + C T SKCM 42854934 + 42854914 42854954 41 GTGGGAGACATCAGTAGTGTCACCTTCTACCACCAGGGCAA GTGGGAGACATCAGTAGTGTTACCTTCTACCACCAGGGCAA Direct Gain 0 0.945196373666498 0 0.979994475841522 prediction 0.890392747332996 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42854934 chr17:42854934 synonymous SNV . 0 21 hPsi_associated_SNPs_107773 0 0 0 0 2 chromatin 0 0.438715550538889 0.959988951683044 0 hPsi_site_6733 iPseU_CNN:0.959988951683044;iRNA_PseU:0 6734 chr12 53848620 53848620 1 + C A ESCA 53848620 - 53848600 53848640 41 AGTAGCCGGATGGTGAGAGTGACATTTAATCCACCTTCAAT AGTAGCCGGATGGTGAGAGTTACATTTAATCCACCTTCAAT Direct Gain 0 0.9451956960591 0 0.999961972236633 prediction 0.8903913921182 Functional Gain - PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53848620 chr12:53848620 synonymous SNV . 0 21 hPsi_associated_SNPs_107774 0 0 0 0 0 Cytosol 0 0.438989513667244 0.999923944473266 0 hPsi_site_6734 iPseU_CNN:0.999923944473266;iRNA_PseU:0 6735 chr4 186244746 186244746 1 + C A STAD 186244746 - 186244726 186244766 41 TGTAAAGTGATTTTTCCACAGATATTTCTTTGCTCTCCACA TGTAAAGTGATTTTTCCACATATATTTCTTTGCTCTCCACA Direct Gain 0 0.945192723587598 0 0.00846326351165771 prediction 0.890385447175196 Functional Gain - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186244746 chr4:186244746 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107775 0 0 0 0 0 Endoplasmic reticulum 0 0.438697447469851 0 0 hPsi_site_6735 iPseU_CNN:0;iRNA_PseU:0 6736 chr19 40149298 40149298 1 + C A LUAD 40149298 - 40149278 40149318 41 GTGCTCACCTCATACTCATTGAGACACACGTAGATGCGCAA GTGCTCACCTCATACTCATTTAGACACACGTAGATGCGCAA Direct Gain 0 0.945192429959247 0 0.993375897407532 prediction 0.890384859918494 Functional Gain - LGALS16 ENSG00000249861 CDS Human protein_coding chr19:40149298 chr19:40149298 synonymous SNV 0.003 0 21 hPsi_associated_SNPs_107776 0 0 0 0 0 unknown 0 0.434365620210063 0.986751794815064 0 hPsi_site_6736 iPseU_CNN:0.986751794815064;iRNA_PseU:0 6737 chr2 166429018 166429018 1 + C A rs567425922 166429018 - 166428998 166429038 41 ATGATCATTTTATCATATGTGTCAGCATCACCGAAGACACA ATGATCATTTTATCATATGTTTCAGCATCACCGAAGACACA Direct Gain 0 0.945191131751346 0 0.350109159946442 prediction 0.890382263502691 Functional Gain - CSRNP3 ENSG00000178662 UTR5 Human protein_coding chr2:166429018 chr2:166429018 . . 0 21 hPsi_associated_SNPs_107777 0 0 0 0 0 exosome 0 0.438768182688027 0 0 hPsi_site_6737 iPseU_CNN:0;iRNA_PseU:0 6738 chr5 23522926 23522926 1 + C T LUSC 23522926 + 23522906 23522946 41 CTGATCTGCCGCTGGGTCTGCACTTTGGCCCTTATGAGGGC CTGATCTGCCGCTGGGTCTGTACTTTGGCCCTTATGAGGGC Direct Gain 0 0.945190648140764 0 0.976248443126678 prediction 0.890381296281528 Functional Gain - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23522926 chr5:23522926 nonsynonymous SNV 0.119 3 21 hPsi_associated_SNPs_107778 0 0 0 0 1 unknown 0 0.438717821145329 0.952496886253356 0 hPsi_site_6738 iPseU_CNN:0.952496886253356;iRNA_PseU:0 6739 chr16 89620251 89620251 1 + G A OV 89620251 - 89620231 89620271 41 GGTGCCATCCCAAACTGCTTCACCATGGAGTAGGCGATGCG GGTGCCATCCCAAACTGCTTTACCATGGAGTAGGCGATGCG Direct Gain 0 0.945186223910448 0 0.998331606388092 prediction 0.890372447820897 Functional Gain - SPG7 ENSG00000197912 CDS Human protein_coding chr16:89620251 chr16:89620251 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107779 0 0 0 0 0 Nucleus 0 0.438712120531447 0.996663212776184 0 hPsi_site_6739 iPseU_CNN:0.996663212776184;iRNA_PseU:0 6740 chr16 76513331 76513331 1 + C T SARC 76513331 + 76513311 76513351 41 TAAAGCTATCTATGAGCAGTCATGTGAAGCCTATAAGCACA TAAAGCTATCTATGAGCAGTTATGTGAAGCCTATAAGCACA Direct Gain 0 0.945185010073844 0 0.999958515167236 prediction 0.890370020147689 Functional Gain - CNTNAP4 ENSG00000152910 CDS Human protein_coding chr16:76513331 chr16:76513331 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107780 0 0 0 0 1 exosome 0 0.438609118810262 0.999917030334472 0 hPsi_site_6740 iPseU_CNN:0.999917030334472;iRNA_PseU:0 6741 chr17 11622732 11622732 1 + G T LUSC 11622732 + 11622712 11622752 41 GCAGGCACAGGCAAGACCGAGACCACCAAGGACCTGGGCCG GCAGGCACAGGCAAGACCGATACCACCAAGGACCTGGGCCG Direct Gain 0 0.945182601111317 0 0.94892281293869 prediction 0.890365202222634 Functional Gain - DNAH9 ENSG00000007174 CDS Human protein_coding chr17:11622732 chr17:11622732 nonsynonymous SNV 0.424 4 21 hPsi_associated_SNPs_107781 0 0 0 0 2 exosome 0 0.438715567967538 0.89784562587738 0 hPsi_site_6741 iPseU_CNN:0.89784562587738;iRNA_PseU:0 6742 chr10 42987719 42987719 1 + C A rs186298961 42987719 - 42987699 42987739 41 GCCATCTGTGTCAACTTCTTGATCTGGCCCCACATGGGTGG GCCATCTGTGTCAACTTCTTTATCTGGCCCCACATGGGTGG Direct Gain 0 0.945181207107859 0 0.99530827999115 prediction 0.890362414215718 Functional Gain - LINC00839 ENSG00000185904 ncRNA_exonic Human lincRNA chr10:42987719 chr10:42987719 . . 0 21 hPsi_associated_SNPs_107782 0 0 0 0 0 unknown 0 0.438718692325171 0.9906165599823 0 hPsi_site_6742 iPseU_CNN:0.9906165599823;iRNA_PseU:0 6743 chr18 67992210 67992210 1 + C T rs143010911 67992210 + 67992190 67992230 41 GGGAGCTCTGCCGACGAGGACACCTTCTCCTCCTCCTCAGC GGGAGCTCTGCCGACGAGGATACCTTCTCCTCCTCCTCAGC Direct Gain 0 0.945175130698658 0 0.999877333641052 prediction 0.890350261397316 Functional Gain - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992210 chr18:67992210 synonymous SNV . 0 21 hPsi_associated_SNPs_107783 0 0 1 0 0 Ribosome 0 0.438718581063911 0.999754667282104 0 hPsi_site_6743 iPseU_CNN:0.999754667282104;iRNA_PseU:0 6744 chr10 105185020 105185020 1 + G A BLCA 105185020 - 105185000 105185040 41 TGGATCCACTTCTTCATCCTCATCAACTGTCTCAGAGTCCT TGGATCCACTTCTTCATCCTTATCAACTGTCTCAGAGTCCT Direct Gain 0 0.945174016314681 0 0.998853921890259 prediction 0.890348032629363 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105185020 chr10:105185020 nonsynonymous SNV 0.852 0 21 hPsi_associated_SNPs_107784 0 0 0 0 0 Nucleus 0 0.441253395574592 0.997707843780518 0 hPsi_site_6744 iPseU_CNN:0.997707843780518;iRNA_PseU:0 6745 chr7 143806807 143806807 1 + C A LUSC 143806807 - 143806787 143806827 41 TCCAGGCAGATAATCCCAAAGATGACCCCATTCCCCAGCAG TCCAGGCAGATAATCCCAAATATGACCCCATTCCCCAGCAG Direct Gain 0 0.945172055759804 0 0.0336701571941376 prediction 0.890344111519607 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143806807 chr7:143806807 synonymous SNV . 0 21 hPsi_associated_SNPs_107785 0 0 0 0 0 unknown 0 0.438706552817336 0 0 hPsi_site_6745 iPseU_CNN:0;iRNA_PseU:0 6746 chr12 4465991 4465991 1 + C T rs566216301 4465991 + 4465971 4466011 41 CAGAAGTTTCCAGTTCCAGGCTTCACCCCAGGCTCGCAGCT CAGAAGTTTCCAGTTCCAGGTTTCACCCCAGGCTCGCAGCT Direct Gain 0 0.945166926485461 0 0.998589396476746 prediction 0.890333852970921 Functional Gain - TIGAR ENSG00000078237;ENSG00000118972 intergenic Human other chr12:4465991 chr12:4465991 . . 0 21 hPsi_associated_SNPs_107786 0 0 1 0 0 Nucleus 0 0.438340010845362 0.997178792953492 0 hPsi_site_6746 iPseU_CNN:0.997178792953492;iRNA_PseU:0 6747 chr12 82752548 82752548 1 + G A COAD 82752548 - 82752528 82752568 41 TCTGAGGGCAGGGCCTCCGTCTCCGACGCTGACTTCCTCAG TCTGAGGGCAGGGCCTCCGTTTCCGACGCTGACTTCCTCAG Direct Gain 0 0.945155166930106 0 0.998963832855225 prediction 0.890310333860212 Functional Gain - METTL25 ENSG00000127720 CDS Human protein_coding chr12:82752548 chr12:82752548 synonymous SNV . 0 21 hPsi_associated_SNPs_107787 0 0 1 0 1 cytosol 0 0.438710206053695 0.99792766571045 0 hPsi_site_6747 iPseU_CNN:0.99792766571045;iRNA_PseU:0 6748 chr1 26355726 26355726 1 + C T LUSC 26355726 + 26355706 26355746 41 CCCAATGCCACCTTCTGCCTCATCTCTGGCCACCGTCCCGA CCCAATGCCACCTTCTGCCTTATCTCTGGCCACCGTCCCGA Direct Gain 0 0.945148452135495 0 0.999609351158142 prediction 0.890296904270989 Functional Gain - EXTL1 ENSG00000158008 CDS Human protein_coding chr1:26355726 chr1:26355726 synonymous SNV . 0 21 hPsi_associated_SNPs_107788 0 0 0 0 2 chromatin 0 0.438718592995102 0.999218702316284 0 hPsi_site_6748 iPseU_CNN:0.999218702316284;iRNA_PseU:0 6749 chr17 42153290 42153290 1 + G A UCEC 42153290 - 42153270 42153310 41 AATTGAAAATGTAGAAGAGGCTGATCTGAGGGGGGTGGCCC AATTGAAAATGTAGAAGAGGTTGATCTGAGGGGGGTGGCCC Direct Gain 0 0.945147628109243 0 0.002736896276474 prediction 0.890295256218486 Functional Gain - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42153290 chr17:42153290 nonsynonymous SNV 1.000 3 21 hPsi_associated_SNPs_107789 0 0 0 0 0 Ribosome 0 0.438718592994397 0 0 hPsi_site_6749 iPseU_CNN:0;iRNA_PseU:0 6750 chr6 41889303 41889303 1 + G A UCEC 41889303 - 41889283 41889323 41 CGGGCCGCCTTGAATTTGGGCATTTTTCTCGAAAAAGTTGC CGGGCCGCCTTGAATTTGGGTATTTTTCTCGAAAAAGTTGC Direct Gain 0 0.945134877298914 0 0.987226486206055 prediction 0.890269754597828 Functional Gain - BYSL ENSG00000112578 CDS Human protein_coding chr6:41889303 chr6:41889303 nonsynonymous SNV 0.996 2 21 hPsi_associated_SNPs_107790 0 0 0 0 0 Ribosome 0 0.438718736133034 0.97445297241211 0 hPsi_site_6750 iPseU_CNN:0.97445297241211;iRNA_PseU:0 6751 chr2 131520981 131520981 1 + G A SKCM 131520981 - 131520961 131521001 41 GGCCGGCCCTGACAGACTCTCAGACACGCACAGGTCATCAT GGCCGGCCCTGACAGACTCTTAGACACGCACAGGTCATCAT Direct Gain 0 0.94513445334522 0 0.17984539270401 prediction 0.890268906690439 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131520981 chr2:131520981 nonsynonymous SNV 0.966 4 21 hPsi_associated_SNPs_107791 0 0 0 0 0 Nucleus 0 0.438718654670423 0 0 hPsi_site_6751 iPseU_CNN:0;iRNA_PseU:0 6752 chr1 47280768 47280768 1 + C T SARC 47280768 + 47280748 47280788 41 TGAAGATGACATCAAACTGTCAGATGCAGACCTCCGGGCTG TGAAGATGACATCAAACTGTTAGATGCAGACCTCCGGGCTG Direct Gain 0 0.945133996017997 0 0.986369788646698 prediction 0.890267992035994 Functional Gain - CYP4B1 ENSG00000142973 CDS Human protein_coding chr1:47280768 chr1:47280768 stopgain 0.100 4 21 hPsi_associated_SNPs_107792 0 0 0 0 1 exosome 0 0.439079033752756 0.972739577293396 0 hPsi_site_6752 iPseU_CNN:0.972739577293396;iRNA_PseU:0 6753 chr16 56906284 56906284 1 + G T UCEC 56906284 + 56906264 56906304 41 CCCAGGTGCTGTTCTTCCTTGTCATCATGGTCTCCTTTGCC CCCAGGTGCTGTTCTTCCTTTTCATCATGGTCTCCTTTGCC Direct Gain 0 0.945133956454295 0 0.0211509466171265 prediction 0.890267912908589 Functional Gain - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56906284 chr16:56906284 nonsynonymous SNV 0.999 3 21 hPsi_associated_SNPs_107793 0 0 0 0 2 nucleus 0 0.438718592995102 0 0 hPsi_site_6753 iPseU_CNN:0;iRNA_PseU:0 6754 chr7 23871965 23871965 1 + G A SKCM 23871965 - 23871945 23871985 41 TTAACAATCAAAGTTGGCTTCACCATTTCTTGTCTTCTCCA TTAACAATCAAAGTTGGCTTTACCATTTCTTGTCTTCTCCA Direct Gain 0 0.945131160580905 0 0.446215242147446 prediction 0.890262321161811 Functional Gain - STK31 ENSG00000196335 CDS Human protein_coding chr7:23871965 chr7:23871965 nonsynonymous SNV 0.967 1 21 hPsi_associated_SNPs_107794 0 0 0 0 0 exosome 0 0.440723609157995 0 0 hPsi_site_6754 iPseU_CNN:0;iRNA_PseU:0 6755 chr4 15529226 15529226 1 + G A BLCA 15529226 - 15529206 15529246 41 GTGTCTTGCAAGGTACTGGTCATATAACTGGGCCAGCTTGG GTGTCTTGCAAGGTACTGGTTATATAACTGGGCCAGCTTGG Direct Gain 0 0.945129104687976 0 0.962999224662781 prediction 0.890258209375952 Functional Gain - CC2D2A ENSG00000048342 CDS Human protein_coding chr4:15529226 chr4:15529226 nonsynonymous SNV 0.936 4 21 hPsi_associated_SNPs_107795 0 0 0 0 0 Nucleus 0 0.438224791695426 0.925998449325562 0 hPsi_site_6755 iPseU_CNN:0.925998449325562;iRNA_PseU:0 6756 chr10 129209130 129209130 1 + G T SKCM 129209130 + 129209110 129209150 41 CAGGGTGAACGAGGTCCAGCGATTTGAATATTCTCGGCCAA CAGGGTGAACGAGGTCCAGCTATTTGAATATTCTCGGCCAA Direct Gain 0 0.945116473316601 0 0.999999821186066 prediction 0.890232946633202 Functional Gain - DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129209130 chr10:129209130 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107796 0 0 0 0 2 Nucleus 0 0.434139160604757 0.999999642372132 0 hPsi_site_6756 iPseU_CNN:0.999999642372132;iRNA_PseU:0 6757 chr20 34499778 34499778 1 + G A rs111853813 34499778 - 34499758 34499798 41 GATCAGCCTGGCCCACATGGCAAAACCCCGTCTCTACTAAA GATCAGCCTGGCCCACATGGTAAAACCCCGTCTCTACTAAA Direct Gain 0 0.945116060416759 0 0.244042336940765 prediction 0.890232120833517 Functional Gain - PHF20 ENSG00000025293 intronic Human protein_coding chr20:34499778 chr20:34499778 . . 0 21 hPsi_associated_SNPs_107797 0 0 0 0 0 Nucleus 0 0.438722720368657 0 0 hPsi_site_6757 iPseU_CNN:0;iRNA_PseU:0 6758 chr1 110768655 110768655 1 + C T BLCA 110768655 + 110768635 110768675 41 GATGAGGAGGGAGCTGGCCTCACCCAACCCCTGGCCTCCTC GATGAGGAGGGAGCTGGCCTTACCCAACCCCTGGCCTCCTC Direct Gain 0 0.945116001745584 0 0.999974012374878 prediction 0.890232003491167 Functional Gain - KCNC4 ENSG00000116396 CDS Human protein_coding chr1:110768655 chr1:110768655 synonymous SNV . 0 21 hPsi_associated_SNPs_107798 0 0 0 0 1 Nucleus 0 0.438718534827825 0.999948024749756 0 hPsi_site_6758 iPseU_CNN:0.999948024749756;iRNA_PseU:0 6759 chr19 10402392 10402392 1 + G A UCEC 10402392 - 10402372 10402412 41 GGCGCGACACGAGAAATTGGCTCCATGGTCCTCCCTCCGAG GGCGCGACACGAGAAATTGGTTCCATGGTCCTCCCTCCGAG Direct Gain 0 0.945113980546232 0 0.99994570016861 prediction 0.890227961092464 Functional Gain - ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10402392 chr19:10402392 nonsynonymous SNV 0.058 1 21 hPsi_associated_SNPs_107799 0 0 0 0 0 Endoplasmic reticulum 0 0.438721069428212 0.99989140033722 0 hPsi_site_6759 iPseU_CNN:0.99989140033722;iRNA_PseU:0 6760 chr10 99433736 99433736 1 + G A rs532476292 99433736 - 99433716 99433756 41 GGGAGATGTTCCTTCCCAGGCATCTGGACTACGTGCATGGA GGGAGATGTTCCTTCCCAGGTATCTGGACTACGTGCATGGA Direct Gain 0 0.945111752857142 0 0.854340195655823 prediction 0.890223505714284 Functional Gain - PI4K2A ENSG00000155252 UTR3 Human protein_coding chr10:99433736 chr10:99433736 . . 0 21 hPsi_associated_SNPs_107800 0 0 0 0 0 Ribosome 0 0.438718536003244 0.708680391311646 0 hPsi_site_6760 iPseU_CNN:0.708680391311646;iRNA_PseU:0 6761 chr20 30193993 30193993 1 + G A rs148925564 30193993 - 30193973 30194013 41 CGATCGGTCTTGTTCTCCCTCAGATCCGGCGAGGCGCGTTG CGATCGGTCTTGTTCTCCCTTAGATCCGGCGAGGCGCGTTG Direct Gain 0 0.945111588197092 0 0.999999761581421 prediction 0.890223176394185 Functional Gain - ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30193993 chr20:30193993 . . 0 21 hPsi_associated_SNPs_107801 0 0 1 0 0 Endoplasmic reticulum 0 0.438718101077629 0.999999523162842 0 hPsi_site_6761 iPseU_CNN:0.999999523162842;iRNA_PseU:0 6762 chr1 222800959 222800959 1 + C T SKCM 222800959 + 222800939 222800979 41 ATGGAGGAAGAGATGATTTTCATAATTATAATGTAGAAGAA ATGGAGGAAGAGATGATTTTTATAATTATAATGTAGAAGAA Direct Gain 0 0.945108364286939 0 0.0699385404586792 prediction 0.890216728573879 Functional Gain - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222800959 chr1:222800959 nonsynonymous SNV 0.997 1 21 hPsi_associated_SNPs_107802 0 0 1 0 0 Endoplasmic reticulum 0 0.438716821837303 0 0 hPsi_site_6762 iPseU_CNN:0;iRNA_PseU:0 6763 chr1 109270564 109270564 1 + G A LIHC 109270564 - 109270544 109270584 41 GGTGCACGCAGGAGTAGTGTCATTGCACTCAACCATGTTGT GGTGCACGCAGGAGTAGTGTTATTGCACTCAACCATGTTGT Direct Gain 0 0.945107718968495 0 0.419741123914719 prediction 0.89021543793699 Functional Gain - FNDC7 ENSG00000143107 CDS Human protein_coding chr1:109270564 chr1:109270564 nonsynonymous SNV 0.780 4 21 hPsi_associated_SNPs_107803 0 0 0 0 0 exosome 0 0.438773799052991 0 0 hPsi_site_6763 iPseU_CNN:0;iRNA_PseU:0 6764 chr20 30671791 30671791 1 + C T rs531123464 30671791 + 30671771 30671811 41 CTGGACAACGGGGGCTTCTACATATCCCCCCGAAGCACCTT CTGGACAACGGGGGCTTCTATATATCCCCCCGAAGCACCTT Direct Gain 0 0.94509633366134 0 0.998955011367798 prediction 0.89019266732268 Functional Gain - HCK ENSG00000101336 CDS Human protein_coding chr20:30671791 chr20:30671791 synonymous SNV . 0 21 hPsi_associated_SNPs_107804 0 0 0 0 1 Nucleus 0 0.438721326113431 0.997910022735596 0 hPsi_site_6764 iPseU_CNN:0.997910022735596;iRNA_PseU:0 6765 chr5 140389333 140389333 1 + C T SKCM 140389333 + 140389313 140389353 41 GGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGC GGTGAGTTGCCCGACAAATTTATTATCCCAGGATCTCCTGC Direct Gain 0 0.945096191154975 0 0.588441550731659 prediction 0.89019238230995 Functional Gain - PCDHA1;PCDHA10;PCDHA11;PCDHA12;PCDHA13;PCDHA2;PCDHA3;PCDHA4;PCDHA5;PCDHA6;PCDHA7;PCDHA8;PCDHA9;PCDHAC1;PCDHAC2 ENSG00000081842;ENSG00000204961;ENSG00000204962;ENSG00000204963;ENSG00000204965;ENSG00000204967;ENSG00000204969;ENSG00000204970;ENSG00000239389;ENSG00000243232;ENSG00000248383;ENSG00000249158;ENSG00000250120;ENSG00000251664;ENSG00000255408 CDS Human other chr5:140389333 chr5:140389333 synonymous SNV . 0 21 hPsi_associated_SNPs_107805 0 0 0 0 0 unknown 0 0.43872368408903 0.176883101463318 0 hPsi_site_6765 iPseU_CNN:0.176883101463318;iRNA_PseU:0 6766 chr7 89909084 89909084 1 + G A LUSC 89909084 - 89909064 89909104 41 TGCATGCAGTTGTAATTCTTCATGCTGTGCTGCAGACCAGT TGCATGCAGTTGTAATTCTTTATGCTGTGCTGCAGACCAGT Direct Gain 0 0.945096127804957 0 0.259140312671661 prediction 0.890192255609914 Functional Gain - CFAP69 ENSG00000105792 CDS Human protein_coding chr7:89909084 chr7:89909084 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107806 0 0 0 0 0 cytosol 0 0.432439067981853 0 0 hPsi_site_6766 iPseU_CNN:0;iRNA_PseU:0 6767 chr1 207639950 207639950 1 + G A LUSC 207639950 - 207639930 207639970 41 CCTGAACAACTGTACCTTATCACGGTACCAACAGCAATGGG CCTGAACAACTGTACCTTATTACGGTACCAACAGCAATGGG Direct Gain 0 0.945095555560832 0 0.653487622737885 prediction 0.890191111121664 Functional Gain - CR2 ENSG00000117322 CDS Human protein_coding chr1:207639950 chr1:207639950 synonymous SNV . 0 21 hPsi_associated_SNPs_107807 0 0 0 0 0 Endoplasmic reticulum 0 0.438718593226615 0.30697524547577 0 hPsi_site_6767 iPseU_CNN:0.30697524547577;iRNA_PseU:0 6768 chr14 37132434 37132434 1 + G A BLCA 37132434 - 37132414 37132454 41 GGAGGGCACATTGTACTTGTCGCACACGCCGTCCGCCAGCA GGAGGGCACATTGTACTTGTTGCACACGCCGTCCGCCAGCA Direct Gain 0 0.945094064931774 0 0.407862484455109 prediction 0.890188129863548 Functional Gain - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132434 chr14:37132434 nonsynonymous SNV 1.000 5 21 hPsi_associated_SNPs_107808 0 0 0 0 0 chromatin 0 0.439971440135876 0 0 hPsi_site_6768 iPseU_CNN:0;iRNA_PseU:0 6769 chr9 71094423 71094423 1 + A T KIRC 71094423 + 71094403 71094443 41 GGAAGCAGAGTGTGGAGGAAATTGTCCGAGATCACTGGGCC GGAAGCAGAGTGTGGAGGAATTTGTCCGAGATCACTGGGCC Direct Gain 0 0.945091640583684 0 0.998574256896973 prediction 0.890183281167367 Functional Gain - PGM5 ENSG00000154330 CDS Human protein_coding chr9:71094423 chr9:71094423 nonsynonymous SNV 0.999 4 21 hPsi_associated_SNPs_107809 0 0 0 0 2 exosome 0 0.438718592994964 0.997148513793946 0 hPsi_site_6769 iPseU_CNN:0.997148513793946;iRNA_PseU:0 6770 chr2 113958749 113958749 1 + G A LGG 113958749 - 113958729 113958769 41 ACCAGCAGCTGCACGTAGGTCTCGTAGCGGGTTTTCTGCAA ACCAGCAGCTGCACGTAGGTTTCGTAGCGGGTTTTCTGCAA Direct Gain 0 0.945088348442398 0 0.999999821186066 prediction 0.890176696884797 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113958749 chr2:113958749 nonsynonymous SNV 0.973 0 21 hPsi_associated_SNPs_107810 0 0 0 0 0 chromatin 0 0.438706746394565 0.999999642372132 0 hPsi_site_6770 iPseU_CNN:0.999999642372132;iRNA_PseU:0 6771 chr2 219000376 219000376 1 + G T LUSC 219000376 + 219000356 219000396 41 AGGACCCAGGTGATCCAGGAGACCTGTGAGCGCCGCAATCA AGGACCCAGGTGATCCAGGATACCTGTGAGCGCCGCAATCA Direct Gain 0 0.945087207757122 0 0.999415516853333 prediction 0.890174415514243 Functional Gain - CXCR2 ENSG00000180871 CDS Human protein_coding chr2:219000376 chr2:219000376 nonsynonymous SNV 0.444 0 21 hPsi_associated_SNPs_107811 0 0 0 0 0 exosome 0 0.438601756479633 0.998831033706666 0 hPsi_site_6771 iPseU_CNN:0.998831033706666;iRNA_PseU:0 6772 chr11 1093622 1093622 1 + T A rs200369243 1093622 - 1093602 1093642 41 TAGTGGTGGTGCTGATGGGTATCATGGTTGGGGTCTGTGTG TAGTGGTGGTGCTGATGGGTTTCATGGTTGGGGTCTGTGTG Direct Gain 0 0.945084736543492 0 0.945541381835938 prediction 0.890169473086984 Functional Gain - MUC2 ENSG00000198788 CDS Human processed_transcript chr11:1093622 chr11:1093622 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107812 0 0 0 0 0 Endoplasmic reticulum 0 0.43855690309378 0.891082763671876 0 hPsi_site_6772 iPseU_CNN:0.891082763671876;iRNA_PseU:0 6773 chr10 88651963 88651963 1 + G A OV 88651963 - 88651943 88651983 41 GCACTGAAAATCAGATCCTTCATATTTCATACACCCTGAAG GCACTGAAAATCAGATCCTTTATATTTCATACACCCTGAAG Direct Gain 0 0.945083154719077 0 0.993475139141083 prediction 0.890166309438154 Functional Gain - BMPR1A ENSG00000107779 CDS Human protein_coding chr10:88651963 chr10:88651963 nonsynonymous SNV 1.000 2 21 hPsi_associated_SNPs_107813 0 0 0 0 0 chromatin 0 0.438717027463443 0.986950278282166 0 hPsi_site_6773 iPseU_CNN:0.986950278282166;iRNA_PseU:0 6774 chr10 89475515 89475515 1 + G A SARC 89475515 - 89475495 89475535 41 GGAGTGGCCCAGCCTTCGCTCAAAACCTGGACCCACTGGAG GGAGTGGCCCAGCCTTCGCTTAAAACCTGGACCCACTGGAG Direct Gain 0 0.945082764490921 0 0.999582588672638 prediction 0.890165528981841 Functional Gain - PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89475515 chr10:89475515 synonymous SNV . 0 21 hPsi_associated_SNPs_107814 0 0 0 0 0 Cytosol 0 0.438718592995062 0.999165177345276 0 hPsi_site_6774 iPseU_CNN:0.999165177345276;iRNA_PseU:0 6775 chr14 39650221 39650221 1 + T A OV 39650221 - 39650201 39650241 41 GAAAGGGTTTTACATTCTTTATCTGGCTCAATTTCAAATTC GAAAGGGTTTTACATTCTTTTTCTGGCTCAATTTCAAATTC Direct Gain 0 0.945082242082689 0 0.332217305898666 prediction 0.890164484165378 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650221 chr14:39650221 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107815 0 0 0 0 0 Nucleus 0 0.438699669562811 0 0 hPsi_site_6775 iPseU_CNN:0;iRNA_PseU:0 6776 chr5 140229903 140229903 1 + C T SKCM 140229903 + 140229883 140229923 41 GGGCTACAACGCGTGGCTTTCATACGAGCTGCAGCCAGAAA GGGCTACAACGCGTGGCTTTTATACGAGCTGCAGCCAGAAA Direct Gain 0 0.945080443132663 0 0.738362789154053 prediction 0.890160886265326 Functional Gain - PCDHA9 ENSG00000204961 CDS Human protein_coding chr5:140229903 chr5:140229903 nonsynonymous SNV 0.187 3 21 hPsi_associated_SNPs_107816 0 0 0 0 0 Nucleus 0 0.438836146504893 0.476725578308106 0 hPsi_site_6776 iPseU_CNN:0.476725578308106;iRNA_PseU:0 6777 chr7 98602943 98602943 1 + G A GBM 98602943 - 98602923 98602963 41 AACAAGTGCCTCTTGGTGGTCTCCTTTCTCTTCTCCAAACA AACAAGTGCCTCTTGGTGGTTTCCTTTCTCTTCTCCAAACA Direct Gain 0 0.945077032883085 0 0.692588210105896 prediction 0.890154065766171 Functional Gain - TRRAP ENSG00000196367 CDS Human protein_coding chr7:98602943 chr7:98602943 synonymous SNV . 0 21 hPsi_associated_SNPs_107817 0 0 0 0 0 Nucleus 0 0.438717882301294 0.385176420211792 0 hPsi_site_6777 iPseU_CNN:0.385176420211792;iRNA_PseU:0 6778 chr14 24439438 24439438 1 + C T rs77228193 24439438 + 24439418 24439458 41 TGCACCCCGGCCCGGTGCCTCACACCCCGCTACCCCAAGCA TGCACCCCGGCCCGGTGCCTTACACCCCGCTACCCCAAGCA Direct Gain 0 0.945076493996641 0 0.999996423721313 prediction 0.890152987993282 Functional Gain - DHRS4L2 ENSG00000215256 ncRNA_intronic Human antisense chr14:24439438 chr14:24439438 . . 0 21 hPsi_associated_SNPs_107818 0 0 0 0 0 exosome 0 0.438705286547071 0.999992847442626 0 hPsi_site_6778 iPseU_CNN:0.999992847442626;iRNA_PseU:0 6779 chr12 118462710 118462710 1 + C A KIRP 118462710 - 118462690 118462730 41 GCAAGGCAGGGATGATCTTTGACAGATAGTTACAGATGAGG GCAAGGCAGGGATGATCTTTTACAGATAGTTACAGATGAGG Direct Gain 0 0.945074381137924 0 3.23355197906494e-05 prediction 0.890148762275849 Functional Gain - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118462710 chr12:118462710 stopgain 0.997 1 21 hPsi_associated_SNPs_107819 0 0 0 0 0 Ribosome 0 0.438718593216095 0 0 hPsi_site_6779 iPseU_CNN:0;iRNA_PseU:0 6780 chr15 93510714 93510714 1 + G T UCEC 93510714 + 93510694 93510734 41 GAACAGATTCTCAGGGTGGAGATGTCAGCCCTTCAGAAACA GAACAGATTCTCAGGGTGGATATGTCAGCCCTTCAGAAACA Direct Gain 0 0.945071905664088 0 0.152763038873672 prediction 0.890143811328177 Functional Gain - CHD2 ENSG00000173575 CDS Human protein_coding chr15:93510714 chr15:93510714 nonsynonymous SNV 1.000 0 21 hPsi_associated_SNPs_107820 0 0 1 0 1 Nucleus 0 0.431252675491402 0 0 hPsi_site_6780 iPseU_CNN:0;iRNA_PseU:0 6781 chr18 13049430 13049430 1 + G T LUAD 13049430 + 13049410 13049450 41 AGTGCAGTAGTTGATGTGAAGACATGTTCCATTGACAACAA AGTGCAGTAGTTGATGTGAATACATGTTCCATTGACAACAA Direct Gain 0 0.945071505876639 0 0.000855594873428345 prediction 0.890143011753279 Functional Gain - CEP192 ENSG00000101639 CDS Human protein_coding chr18:13049430 chr18:13049430 nonsynonymous SNV 0.010 0 21 hPsi_associated_SNPs_107821 0 0 1 0 0 Nucleus 0 0.439043547832183 0 0 hPsi_site_6781 iPseU_CNN:0;iRNA_PseU:0 6782 chr6 168999584 168999584 1 + C T COAD 168999584 + 168999564 168999604 41 TGGTGATCCCTGAGTGTGCGCACGGCGGCCTCTACAAGCCA TGGTGATCCCTGAGTGTGCGTACGGCGGCCTCTACAAGCCA Direct Gain 0 0.945068101235705 0 0.656949520111084 prediction 0.89013620247141 Functional Gain - SMOC2 ENSG00000112562 CDS Human protein_coding chr6:168999584 chr6:168999584 nonsynonymous SNV 0.069 1 21 hPsi_associated_SNPs_107822 0 0 0 0 0 Ribosome 0 0.438718275509422 0.313899040222168 0 hPsi_site_6782 iPseU_CNN:0.313899040222168;iRNA_PseU:0 6783 chr11 66834240 66834240 1 + G T LUAD 66834240 + 66834220 66834260 41 TATGACCGCCTGCGGCCCCTGTTCTACCCTGACGCCAGCGT TATGACCGCCTGCGGCCCCTTTTCTACCCTGACGCCAGCGT Direct Gain 0 0.945064314526588 0 0.997114360332489 prediction 0.890128629053176 Functional Gain - RHOD ENSG00000173156 CDS Human protein_coding chr11:66834240 chr11:66834240 synonymous SNV . 0 21 hPsi_associated_SNPs_107823 0 0 0 0 2 Cytosol 0 0.438701811513877 0.994228720664978 0 hPsi_site_6783 iPseU_CNN:0.994228720664978;iRNA_PseU:0 6784 chr17 48188447 48188447 1 + G T rs138486577 48188447 + 48188427 48188467 41 GCCTGGCTGCATCCCTGGGGGAGGGGACCCACACGTGCGCA GCCTGGCTGCATCCCTGGGGTAGGGGACCCACACGTGCGCA Direct Gain 0 0.945055924747679 0 0.998423933982849 prediction 0.890111849495358 Functional Gain - PDK2 ENSG00000005882;ENSG00000167100 UTR3 Human other chr17:48188447 chr17:48188447 . . 0 21 hPsi_associated_SNPs_107824 0 0 0 0 0 Ribosome 0 0.43871859179208 0.996847867965698 0 hPsi_site_6784 iPseU_CNN:0.996847867965698;iRNA_PseU:0 6785 chr13 114438276 114438276 1 + G A CESC 114438276 - 114438256 114438296 41 GAGCCCCCGGAGATGCCCTTCATGTCGTCCGGCATCTGACC GAGCCCCCGGAGATGCCCTTTATGTCGTCCGGCATCTGACC Direct Gain 0 0.945051690351885 0 0.983957886695862 prediction 0.890103380703771 Functional Gain - GRK1 ENSG00000185974 CDS Human protein_coding chr13:114438276 chr13:114438276 nonsynonymous SNV 0.636 1 21 hPsi_associated_SNPs_107825 0 0 0 0 0 exosome 0 0.438718512754511 0.967915773391724 0 hPsi_site_6785 iPseU_CNN:0.967915773391724;iRNA_PseU:0 6786 chr13 42763216 42763216 1 + G A BLCA 42763216 - 42763196 42763236 41 GCAGCCTGGGAATCTGTGTGCAAAGCCTGCAGCAGTTGTTC GCAGCCTGGGAATCTGTGTGTAAAGCCTGCAGCAGTTGTTC Direct Gain 0 0.945050152200243 0 0.913590312004089 prediction 0.890100304400486 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42763216 chr13:42763216 synonymous SNV . 0 21 hPsi_associated_SNPs_107826 0 0 0 0 0 chromatin 0 0.438997045618275 0.827180624008178 0 hPsi_site_6786 iPseU_CNN:0.827180624008178;iRNA_PseU:0 6787 chr18 77514388 77514388 1 + T A rs368146310 77514388 - 77514368 77514408 41 AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGC AAAGGCCGCCCAGGAAAAGCTACGCCCCCTTGCCAGGATGC Direct Gain 0 0.945048608573303 0 0.975774765014648 prediction 0.890097217146607 Functional Gain - CTDP1 ENSG00000060069 UTR3 Human protein_coding chr18:77514388 chr18:77514388 . . 0 21 hPsi_associated_SNPs_107827 0 0 0 0 0 chromatin 0 0.438718594959596 0.951549530029296 0 hPsi_site_6787 iPseU_CNN:0.951549530029296;iRNA_PseU:0 6788 chr6 72922868 72922868 1 + G A UCEC 72922868 - 72922848 72922888 41 GGAATCAACAGACCTCACTTCTTCCCACCCTTCTGAAGAGA GGAATCAACAGACCTCACTTTTTCCCACCCTTCTGAAGAGA Direct Gain 0 0.945045348168921 0 0.931495189666748 prediction 0.890090696337843 Functional Gain - RIMS1 ENSG00000079841 CDS Human protein_coding chr6:72922868 chr6:72922868 nonsynonymous SNV 0.970 0 21 hPsi_associated_SNPs_107828 0 0 0 0 0 Endoplasmic reticulum 0 0.438718592993542 0.862990379333496 0 hPsi_site_6788 iPseU_CNN:0.862990379333496;iRNA_PseU:0 6789 chr6 129581936 129581936 1 + G A LUSC 129581936 - 129581916 129581956 41 AGCCAGTATACCCTGGTGGGCACTGACACACTTCTACAGCT AGCCAGTATACCCTGGTGGGTACTGACACACTTCTACAGCT Direct Gain 0 0.945037565402742 0 0.959384202957153 prediction 0.890075130805483 Functional Gain - LAMA2 ENSG00000196569 CDS Human protein_coding chr6:129581936 chr6:129581936 nonsynonymous SNV 0.906 4 21 hPsi_associated_SNPs_107829 0 0 0 0 0 cytosol 0 0.438711152327373 0.918768405914306 0 hPsi_site_6789 iPseU_CNN:0.918768405914306;iRNA_PseU:0 6790 chr12 122247600 122247600 1 + C A LIHC 122247600 - 122247580 122247620 41 CTGTGTCCTGGGAGAAGGGTGTCCCACCGCTATTGGGGGTG CTGTGTCCTGGGAGAAGGGTTTCCCACCGCTATTGGGGGTG Direct Gain 0 0.945036249419476 0 0.348453193902969 prediction 0.890072498838953 Functional Gain - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122247600 chr12:122247600 nonsynonymous SNV 0.995 4 21 hPsi_associated_SNPs_107830 0 0 0 0 0 chromatin 0 0.438652416873083 0 0 hPsi_site_6790 iPseU_CNN:0;iRNA_PseU:0 6791 chr12 125618604 125618604 1 + C T LUAD 125618604 + 125618584 125618624 41 CCCAAGACCGGGGGCATCGTCATGCTTGGCCGGAGGTAAGG CCCAAGACCGGGGGCATCGTTATGCTTGGCCGGAGGTAAGG Direct Gain 0 0.945034175794768 0 0.981962382793427 prediction 0.890068351589536 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125618604 chr12:125618604 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107831 0 0 0 0 2 Ribosome 0 0.438718592993564 0.963924765586854 0 hPsi_site_6791 iPseU_CNN:0.963924765586854;iRNA_PseU:0 6792 chr22 22550510 22550510 1 + T A rs2073448 22550510 - 22550490 22550530 41 ATAGATCACAGTGGTGGGGGAACTGCCCGGGCGCTGCTGGT ATAGATCACAGTGGTGGGGGTACTGCCCGGGCGCTGCTGGT Direct Gain 0 0.945031788333115 0 0.999831438064575 prediction 0.890063576666231 Functional Gain - PRAMENP;VPREB1 ENSG00000211640 CDS Human IG_V_gene chr22:22550510 chr22:22550510 nonsynonymous SNV . 0 21 hPsi_associated_SNPs_107832 0 0 0 0 0 unknown 0 0.438729411907173 0.99966287612915 0 hPsi_site_6792 iPseU_CNN:0.99966287612915;iRNA_PseU:0 6793 chr3 16260953 16260953 1 + G A SKCM 16260953 - 16260933 16260973 41 GGAATGTCCGACAACCCAGTCTCCTTTGCAGCTGCAAGCGT GGAATGTCCGACAACCCAGTTTCCTTTGCAGCTGCAAGCGT Direct Gain 0 0.945019474709599 0 0.985979318618774 prediction 0.890038949419199 Functional Gain - GALNT15 ENSG00000131386 CDS Human protein_coding chr3:16260953 chr3:16260953 nonsynonymous SNV 0.982 1 21 hPsi_associated_SNPs_107833 0 0 0 0 0 exosome 0 0.438708501717671 0.971958637237548 0 hPsi_site_6793 iPseU_CNN:0.971958637237548;iRNA_PseU:0 6794 chr22 44386233 44386233 1 + C A UCEC 44386233 - 44386213 44386253 41 TAATTAAGTTCCAACCGAGCGATGTTGCCAAGCCTGAGGAC TAATTAAGTTCCAACCGAGCTATGTTGCCAAGCCTGAGGAC Direct Gain 0 0.945012544236384 0 0.343980848789215 prediction 0.890025088472768 Functional Gain - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44386233 chr22:44386233 synonymous SNV . 0 21 hPsi_associated_SNPs_107834 0 0 0 0 0 Cytosol 0 0.438721945897465 0 0 hPsi_site_6794 iPseU_CNN:0;iRNA_PseU:0 6795 chr2 187540432 187540432 1 + G A UCEC 187540432 - 187540412 187540452 41 CTACTTACATTCATAAAAGTCTCAGTCCACAGTAATGACTT CTACTTACATTCATAAAAGTTTCAGTCCACAGTAATGACTT Direct Gain 0 0.945010675443728 0 0.999695181846619 prediction 0.890021350887456 Functional Gain - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187540432 chr2:187540432 synonymous SNV . 0 21 hPsi_associated_SNPs_107835 0 0 0 0 0 Endoplasmic reticulum 0 0.438421266985867 0.999390363693238 0 hPsi_site_6795 iPseU_CNN:0.999390363693238;iRNA_PseU:0 6796 chr12 54963009 54963009 1 + C T DLBC 54963009 + 54962989 54963029 41 CGAGCTGCAGGAGCTGCGGTCAGATGCCGTGCCTTCGGAGG CGAGCTGCAGGAGCTGCGGTTAGATGCCGTGCCTTCGGAGG Direct Gain 0 0.945008589286298 0 0.999999403953552 prediction 0.890017178572595 Functional Gain - PDE1B ENSG00000123360 CDS Human protein_coding chr12:54963009 chr12:54963009 stopgain 0.989 1 21 hPsi_associated_SNPs_107836 0 0 0 0 1 exosome 0 0.438715720529751 0.999998807907104 0 hPsi_site_6796 iPseU_CNN:0.999998807907104;iRNA_PseU:0 6797 chr22 45929034 45929034 1 + C A COAD 45929034 - 45929014 45929054 41 GGGACATTACCTTCACAGGAGACACCATCAGACAGCAGCTG GGGACATTACCTTCACAGGATACACCATCAGACAGCAGCTG Direct Gain 0 0.945006980785917 0 0.855324149131775 prediction 0.890013961571834 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45929034 chr22:45929034 synonymous SNV . 0 21 hPsi_associated_SNPs_107837 0 0 0 0 0 cytosol 0 0.43868089497929 0.71064829826355 0 hPsi_site_6797 iPseU_CNN:0.71064829826355;iRNA_PseU:0 6798 chr2 152325186 152325186 1 + G A COAD 152325186 - 152325166 152325206 41 GGTAAACACTTTCTGTTGGGCATGGTATGGATTCTTTGGCC GGTAAACACTTTCTGTTGGGTATGGTATGGATTCTTTGGCC Direct Gain 0 0.945004181640182 0 0.474014401435852 prediction 0.890008363280364 Functional Gain - RIF1 ENSG00000080345 CDS Human protein_coding chr2:152325186 chr2:152325186 nonsynonymous SNV 0.821 2 21 hPsi_associated_SNPs_107838 0 0 0 0 0 Nucleus 0 0.438718592995102 0 0 hPsi_site_6798 iPseU_CNN:0;iRNA_PseU:0 6799 chr17 45820522 45820522 1 + C A LUAD 45820522 - 45820502 45820542 41 GACGCCCCCTTGTTGTTTGTGAGCTTTAGTTTCCCAAATGA GACGCCCCCTTGTTGTTTGTTAGCTTTAGTTTCCCAAATGA Direct Gain 0 0.94500342750653 0 0.999648213386536 prediction 0.890006855013061 Functional Gain - TBX21 ENSG00000073861 CDS Human protein_coding chr17:45820522 chr17:45820522 synonymous SNV . 0 21 hPsi_associated_SNPs_107839 0 0 0 0 0 exosome 0 0.438718592827961 0.999296426773072 0 hPsi_site_6799 iPseU_CNN:0.999296426773072;iRNA_PseU:0 6800 chr17 76046560 76046560 1 + G A LIHC 76046560 - 76046540 76046580 41 CCAGGCCTCTGTCCCATTGTCATTTTTCCTTTCAGACCTAG CCAGGCCTCTGTCCCATTGTTATTTTTCCTTTCAGACCTAG Direct Gain 0 0.945003059077595 0 0.327382296323776 prediction 0.89000611815519 Functional Gain - TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76046560 chr17:76046560 nonsynonymous SNV 1.000 4 21 hPsi_associated_SNPs_107840 0 0 0 0 0 chromatin 0 0.438718641582218 0 0 hPsi_site_6800 iPseU_CNN:0;iRNA_PseU:0 6801 chr4 123159417 123159417 1 + G A BLCA 123159417 - 123159397 123159437 41 AGATGAAGGACTTTCCTTTTCACCAGCCAACAAAGGCTGTG AGATGAAGGACTTTCCTTTTTACCAGCCAACAAAGGCTGTG Direct Gain 0 0.945002880568901 0 0.903768301010132 prediction 0.890005761137802 Functional Gain - KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123159417 chr4:123159417 nonsynonymous SNV 0.959 1 21 hPsi_associated_SNPs_107841 0 0 0 0 0 Nucleus 0 0.438728581133039 0.807536602020264 0 hPsi_site_6801 iPseU_CNN:0.807536602020264;iRNA_PseU:0 6802 chr1 986918 986918 1 + C A rs72900459 986901 + 986881 986921 41 CAGGTGGACGTCACGTCCTTTGCAGGTCACCCCTGCACCCG CAGGTGGACGTCACGTCCTTTGCAGGTCACCCCTGCAACCG < 41bp 1 0.547044669234216 1 0.988633871078491 experiment 0.905910661531568 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:986901 chr1:986918 nonsynonymous SNV 0.890 3 38 hPsi_associated_SNPs_25 0 0 1 0 1 Endoplasmic reticulum 1 0.438729110743554 0.022732257843018 1 hPsi_site_6802 iPseU_CNN:0.022732257843018;iRNA_PseU:1 6803 chr1 1387776 1387776 1 + C T rs144852834 1387773 + 1387753 1387793 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCTGTGCCTTTGTGACAGAC < 41bp 1 0.655526164400307 1 0.99093234539032 experiment 0.688947671199386 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387773 chr1:1387776 nonsynonymous SNV 0.964 2 24 hPsi_associated_SNPs_27 0 0 0 0 2 Nucleus 1 0.440013168790383 0.0181353092193599 1 hPsi_site_6803 iPseU_CNN:0.0181353092193599;iRNA_PseU:1 6804 chr1 17216212 17216212 1 + C A rs571173747 17216199 + 17216179 17216219 41 TGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGAT TGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACAGAAAGAT < 41bp 1 0.645919934041402 1 0.999953627586365 experiment 0.708160131917196 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216199 chr1:17216212 . . 0 34 hPsi_associated_SNPs_31 0 0 1 0 0 unknown 1 0.512022997689828 9.27448272700637e-05 0.975954004620344 hPsi_site_6804 iPseU_CNN:9.27448272700637e-05;iRNA_PseU:0.975954004620344 6805 chr1 17216212 17216212 1 + C A rs571173747 17216200 + 17216180 17216220 41 GGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGATT GGCGCAATCGGTTAGCGCGTTCGGCTGTTAACAGAAAGATT < 41bp 1 0.4102394969412 1 0.99398136138916 experiment 1 Functional Loss NA| LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216200 chr1:17216212 . . 0 33 hPsi_associated_SNPs_32 0 0 1 0 0 unknown 1 0.44790048986743 0.0120372772216799 1 hPsi_site_6805 iPseU_CNN:0.0120372772216799;iRNA_PseU:1 6806 chr1 22418987 22418987 1 + T C rs16831110 22418989 + 22418969 22419009 41 GCAGCTGAAGACCTGTTATGTAGAGGAAATACGAGGGGTGG GCAGCTGAAGACCTGTTACGTAGAGGAAATACGAGGGGTGG < 41bp 1 0.540719774784466 1 0.999441683292389 experiment 0.918560450431067 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22418989 chr1:22418987 . . 0 19 hPsi_associated_SNPs_37 0 0 1 0 0 Ribosome 1 0.4387668905285 0.00111663341522195 1 hPsi_site_6806 iPseU_CNN:0.00111663341522195;iRNA_PseU:1 6807 chr1 24086842 24086842 1 + A C rs145741259 24086845 + 24086825 24086865 41 GGACGCAGAACCTTGGGAGATTGATTTGCACAGAACTCCCC GGACGCAGAACCTTGGGCGATTGATTTGCACAGAACTCCCC < 41bp 1 0.585124098960115 1 0.0216202139854431 experiment 0.82975180207977 Functional Loss NA| ELOA ENSG00000011007 UTR3 Human protein_coding chr1:24086845 chr1:24086842 . . 0 18 hPsi_associated_SNPs_38 0 0 1 3 0 unknown 1 0.438721781737442 1 1 hPsi_site_6807 iPseU_CNN:1;iRNA_PseU:1 6808 chr1 27633849 27633849 1 + G A rs536698326 27633863 + 27633843 27633883 41 CACTCAGATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCC CACTCAAATGGGAAAGTCCCTTACTCGGCCCCTCCCTCCCC < 41bp 1 0.607376444342141 1 0.999212682247162 experiment 0.785247111315718 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDTC1 ENSG00000142784 UTR3 Human protein_coding chr1:27633863 chr1:27633849 . . 0 7 hPsi_associated_SNPs_39 0 0 1 0 0 Cytosol 1 0.438718593153959 0.00157463550567605 1 hPsi_site_6808 iPseU_CNN:0.00157463550567605;iRNA_PseU:1 6809 chr1 32526397 32526397 1 + T G rs180690785 32526378 + 32526358 32526398 41 AAAGGGTAGGGCTTTTTCTGTTCCACCTCTGTACTATATTT AAAGGGTAGGGCTTTTTCTGTTCCACCTCTGTACTATATGT < 41bp 1 0.523430212776205 1 0.318783789873123 experiment 0.953139574447591 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KHDRBS1;TMEM39B ENSG00000203325 ncRNA_intronic Human antisense chr1:32526378 chr1:32526397 . . 0 40 hPsi_associated_SNPs_43 0 0 1 0 0 unknown 1 0.438987752367763 1 1 hPsi_site_6809 iPseU_CNN:1;iRNA_PseU:1 6810 chr1 33151528 33151528 1 + A G rs567425944 33151525 + 33151505 33151545 41 TTCAAAGGCTTTCCACTTTCTTTAGTGGCATTCAGACCCCC TTCAAAGGCTTTCCACTTTCTTTGGTGGCATTCAGACCCCC < 41bp 1 0.253934754013715 1 0.885472655296326 experiment 1 Functional Loss NA| RBBP4 ENSG00000162521 UTR3 Human protein_coding chr1:33151525 chr1:33151528 . . 0 24 hPsi_associated_SNPs_44 0 0 1 0 0 Ribosome 1 0.438718591103012 0.229054689407348 1 hPsi_site_6810 iPseU_CNN:0.229054689407348;iRNA_PseU:1 6811 chr1 33151537 33151537 1 + C T rs145447364 33151525 + 33151505 33151545 41 TTCAAAGGCTTTCCACTTTCTTTAGTGGCATTCAGACCCCC TTCAAAGGCTTTCCACTTTCTTTAGTGGCATTTAGACCCCC < 41bp 1 0.251626292455132 1 0.77806556224823 experiment 1 Functional Loss NA| RBBP4 ENSG00000162521 UTR3 Human protein_coding chr1:33151525 chr1:33151537 . . 0 33 hPsi_associated_SNPs_45 0 0 1 0 0 Ribosome 1 0.438820966985015 0.44386887550354 1 hPsi_site_6811 iPseU_CNN:0.44386887550354;iRNA_PseU:1 6812 chr1 36752687 36752687 1 + A C rs58840555 36752689 + 36752669 36752709 41 ACATCCCAGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA ACATCCCAGATGGGCTCACCTCTGCCGAGTGGTGCCGGGTA < 41bp 1 0.428227487293533 1 0.987835705280304 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752689 chr1:36752687 nonsynonymous SNV 0.075 1 19 hPsi_associated_SNPs_46 0 0 1 0 0 Nucleus 1 0.438718513795762 0.0243285894393921 1 hPsi_site_6812 iPseU_CNN:0.0243285894393921;iRNA_PseU:1 6813 chr1 44072018 44072018 1 + C T rs1065772 44072025 + 44072005 44072045 41 TGCTCCCGGAGACCTTTACCTTGGGGGACAAGAAGAACTAC TGCTCCCGGAGACTTTTACCTTGGGGGACAAGAAGAACTAC < 41bp 1 0.42062586726949 1 0.994605600833893 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PTPRF ENSG00000142949 CDS Human protein_coding chr1:44072025 chr1:44072018 synonymous SNV . 0 14 hPsi_associated_SNPs_47 0 0 1 0 0 Ribosome 1 0.438718587956511 0.0107887983322139 1 hPsi_site_6813 iPseU_CNN:0.0107887983322139;iRNA_PseU:1 6814 chr1 44182174 44182174 1 + C A rs573796298 44182168 + 44182148 44182188 41 TGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGAT TGGCAGCACATATACTAAAATTGGAAAGATACAGAGAAGAT < 41bp 1 0.127219432581084 1 0.99971878528595 experiment 1 Functional Loss NA| LOC101929592 ENSG00000252201 ncRNA_exonic Human other chr1:44182168 chr1:44182174 . . 0 27 hPsi_associated_SNPs_48 0 0 1 0 0 unknown 1 0.439400655602123 0.00056242942809992 1 hPsi_site_6814 iPseU_CNN:0.00056242942809992;iRNA_PseU:1 6815 chr1 44182174 44182174 1 + C A rs573796298 44182177 + 44182157 44182197 41 ATATACTAAAATTGGAACGATACAGAGAAGATTAGGATGAC ATATACTAAAATTGGAAAGATACAGAGAAGATTAGGATGAC < 41bp 1 0.427612612639965 1 0.992221415042877 experiment 1 Functional Loss NA| LOC101929592 ENSG00000252201 ncRNA_exonic Human other chr1:44182177 chr1:44182174 . . 0 18 hPsi_associated_SNPs_49 0 0 1 0 0 unknown 1 0.438681466449157 0.015557169914246 1 hPsi_site_6815 iPseU_CNN:0.015557169914246;iRNA_PseU:1 6816 chr1 44456321 44456321 1 + T C rs370480154 44456315 + 44456295 44456335 41 CCTCCTGCCTGGGCAGGCTCTTCAAGTGTGGCCCTCTTTGG CCTCCTGCCTGGGCAGGCTCTTCAAGCGTGGCCCTCTTTGG < 41bp 1 0.688108471418795 1 0.994791507720947 experiment 0.623783057162411 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock B4GALT2 ENSG00000117411 UTR3 Human protein_coding chr1:44456315 chr1:44456321 . . 0 27 hPsi_associated_SNPs_50 0 0 1 1 0 Cytosol 1 0.439614238677209 0.0104169845581059 1 hPsi_site_6816 iPseU_CNN:0.0104169845581059;iRNA_PseU:1 6817 chr1 46049849 46049849 1 + G A rs28365868 46049831 + 46049811 46049851 41 GGGGAACGATGGCCATGGAGTCCACAGCCACTGCCGCCGTC GGGGAACGATGGCCATGGAGTCCACAGCCACTGCCGCCATC < 41bp 1 0.544741757697256 1 0.960851430892944 experiment 0.910516484605487 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NASP ENSG00000132780 CDS Human protein_coding chr1:46049831 chr1:46049849 nonsynonymous SNV 0.999 0 39 hPsi_associated_SNPs_51 0 0 1 0 1 Nucleus 1 0.440584627075323 0.078297138214112 1 hPsi_site_6817 iPseU_CNN:0.078297138214112;iRNA_PseU:1 Multiple continuous traits in DGI samples 6818 chr1 53290270 53290270 1 + C T rs375978092 53290262 + 53290242 53290282 41 TGGAGGTTGTGGTGAGCCAATATCATGCCACTGCACTCCAG TGGAGGTTGTGGTGAGCCAATATCATGCTACTGCACTCCAG < 41bp 1 0.256404205999623 1 0.998478770256042 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZYG11B ENSG00000162378 UTR3 Human protein_coding chr1:53290262 chr1:53290270 . . 0 29 hPsi_associated_SNPs_52 0 0 0 0 0 Ribosome 1 0.438718592995172 0.00304245948791593 1 hPsi_site_6818 iPseU_CNN:0.00304245948791593;iRNA_PseU:1 6819 chr1 53516432 53516432 1 + A G rs74363442 53516452 + 53516432 53516472 41 ATACATTTTATTGTCAGAATTTAGACTGAAACTACACATTG GTACATTTTATTGTCAGAATTTAGACTGAAACTACACATTG < 41bp 1 0.208236459371456 1 0.972535490989685 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SCP2 ENSG00000116171 UTR3 Human protein_coding chr1:53516452 chr1:53516432 . . 0 1 hPsi_associated_SNPs_53 0 0 1 0 0 Ribosome 1 0.98911091643596 0.0549290180206301 0.0217781671280808 hPsi_site_6819 iPseU_CNN:0.0549290180206301;iRNA_PseU:0.0217781671280808 6820 chr1 53516446 53516446 1 + C G rs114881358 53516452 + 53516432 53516472 41 ATACATTTTATTGTCAGAATTTAGACTGAAACTACACATTG ATACATTTTATTGTGAGAATTTAGACTGAAACTACACATTG < 41bp 1 0.204592804559045 1 0.914884209632874 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SCP2 ENSG00000116171 UTR3 Human protein_coding chr1:53516452 chr1:53516446 . . 0 15 hPsi_associated_SNPs_54 0 0 1 0 0 Ribosome 1 0.447973208494118 0.170231580734252 1 hPsi_site_6820 iPseU_CNN:0.170231580734252;iRNA_PseU:1 6821 chr1 55207534 55207534 1 + T G rs77941984 55207523 + 55207503 55207543 41 CTCAGGATCCAGTGACATGATTCTGAACTTTTGTGGAGTTT CTCAGGATCCAGTGACATGATTCTGAACTTTGGTGGAGTTT < 41bp 1 0.516753480960745 1 0.993434906005859 experiment 0.966493038078509 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207523 chr1:55207534 . . 0 32 hPsi_associated_SNPs_55 0 0 1 2 0 exosome 1 0.438718578466927 0.0131301879882819 1 hPsi_site_6821 iPseU_CNN:0.0131301879882819;iRNA_PseU:1 6822 chr1 55207534 55207534 1 + T G rs77941984 55207541 + 55207521 55207561 41 GATTCTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTA GATTCTGAACTTTGGTGGAGTTTGACACCTTAGAGAAGCTA < 41bp 1 0.562097367753477 1 0.984798491001129 experiment 0.875805264493047 Functional Loss NA| MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207541 chr1:55207534 . . 0 14 hPsi_associated_SNPs_56 0 0 1 2 0 exosome 1 0.475323618910312 0.0304030179977419 1 hPsi_site_6822 iPseU_CNN:0.0304030179977419;iRNA_PseU:1 6823 chr1 55207538 55207538 1 + G A rs17131750 55207523 + 55207503 55207543 41 CTCAGGATCCAGTGACATGATTCTGAACTTTTGTGGAGTTT CTCAGGATCCAGTGACATGATTCTGAACTTTTGTGAAGTTT < 41bp 1 0.513610395577538 1 0.99020928144455 experiment 0.972779208844925 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207523 chr1:55207538 . . 0 36 hPsi_associated_SNPs_57 0 0 1 2 0 exosome 1 0.438732654550886 0.0195814371109 1 hPsi_site_6823 iPseU_CNN:0.0195814371109;iRNA_PseU:1 6824 chr1 55207538 55207538 1 + G A rs17131750 55207541 + 55207521 55207561 41 GATTCTGAACTTTTGTGGAGTTTGACACCTTAGAGAAGCTA GATTCTGAACTTTTGTGAAGTTTGACACCTTAGAGAAGCTA < 41bp 1 0.588114835986688 1 0.999163866043091 experiment 0.823770328026624 Functional Loss NA| MROH7-TTC4 ENSG00000243725;ENSG00000271723 UTR3 Human other chr1:55207541 chr1:55207538 . . 0 18 hPsi_associated_SNPs_58 0 0 1 2 0 exosome 1 0.438954605231232 0.00167226791381792 1 hPsi_site_6824 iPseU_CNN:0.00167226791381792;iRNA_PseU:1 6825 chr1 65897747 65897747 1 + A G rs1887285 65897764 + 65897744 65897784 41 TTCATAAGTAGGAGATGAGTTTTATTCTCAGCAAATAGACC TTCGTAAGTAGGAGATGAGTTTTATTCTCAGCAAATAGACC < 41bp 1 0.42544803558561 1 0.99953830242157 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LEPROT ENSG00000213625 UTR3 Human protein_coding chr1:65897764 chr1:65897747 . . 0 4 hPsi_associated_SNPs_59 0 0 1 0 0 Ribosome 1 0.442509568409287 0.000923395156859907 1 hPsi_site_6825 iPseU_CNN:0.000923395156859907;iRNA_PseU:1 6826 chr1 93720070 93720070 1 + C G rs12030843 93720071 + 93720051 93720091 41 ACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAA ACAAAATGCTAAAGAACAGGTTCGAGAAAAAGAGTTTATAA < 41bp 1 0.495353807604717 1 0.998937249183655 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93720071 chr1:93720070 nonsynonymous SNV 0.996 1 20 hPsi_associated_SNPs_60 0 0 0 0 0 chromatin 1 0.438676175512961 0.00212550163268999 1 hPsi_site_6826 iPseU_CNN:0.00212550163268999;iRNA_PseU:1 6827 chr1 109759776 109759776 1 + A G rs685653 109759777 + 109759757 109759797 41 GGAATAGAATGTTAGCTTCATGTATACAGATGCTCCTTGAC GGAATAGAATGTTAGCTTCGTGTATACAGATGCTCCTTGAC < 41bp 1 0.28215772769761 1 0.964967012405396 experiment 1 Functional Loss NA| SARS ENSG00000031698 intronic Human protein_coding chr1:109759777 chr1:109759776 . . 0 20 hPsi_associated_SNPs_61 0 0 1 0 0 Ribosome 1 0.440377964946576 0.0700659751892081 1 hPsi_site_6827 iPseU_CNN:0.0700659751892081;iRNA_PseU:1 6828 chr1 111727669 111727669 1 + A T rs185315561 111727683 + 111727663 111727703 41 TTTTTTAAATTTAAGCAAAATTTATTTCTGTTCTTTAATAA TTTTTTTAATTTAAGCAAAATTTATTTCTGTTCTTTAATAA < 41bp 1 0.311852106867182 1 0.954436302185059 experiment 1 Functional Loss NA| CEPT1 ENSG00000273221 ncRNA_exonic Human antisense chr1:111727683 chr1:111727669 . . 0 7 hPsi_associated_SNPs_62 0 0 1 4 0 Endoplasmic reticulum 1 0.999989072362632 0.0911273956298819 2.18552747350831e-05 hPsi_site_6828 iPseU_CNN:0.0911273956298819;iRNA_PseU:2.18552747350831e-05 6829 chr1 144944675 144944675 1 + G A rs587601702 144944677 + 144944657 144944697 41 AATAATCAGGATGGAATCGCTTCTCGGCCTTTTGGCTAAGA AATAATCAGGATGGAATCACTTCTCGGCCTTTTGGCTAAGA < 41bp 1 0.651433213284594 1 0.687670350074768 experiment 0.697133573430812 Functional Loss NA| LOC100996724 ENSG00000222788 ncRNA_exonic Human snRNA chr1:144944677 chr1:144944675 . . 0 19 hPsi_associated_SNPs_64 0 0 1 0 0 unknown 1 0.438811594801059 0.624659299850464 1 hPsi_site_6829 iPseU_CNN:0.624659299850464;iRNA_PseU:1 6830 chr1 144944675 144944675 1 + G A rs587601702 144944686 + 144944666 144944706 41 GATGGAATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTA GATGGAATCACTTCTCGGCCTTTTGGCTAAGATCAAGTGTA < 41bp 1 0.675744640824599 1 0.999436855316162 experiment 0.648510718350801 Functional Loss NA| LOC100996724 ENSG00000222788 ncRNA_exonic Human snRNA chr1:144944686 chr1:144944675 . . 0 10 hPsi_associated_SNPs_66 0 0 1 0 0 unknown 1 0.439203258786365 0.001126289367676 1 hPsi_site_6830 iPseU_CNN:0.001126289367676;iRNA_PseU:1 6831 chr1 144944716 144944716 1 + C G rs587659178 144944708 + 144944688 144944728 41 TTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGCTTAA TTGGCTAAGATCAAGTGTAGTATCTGTTGTTATCAGCTTAA < 41bp 1 0.676503706112047 1 0.999999165534973 experiment 0.646992587775906 Functional Loss NA| LOC100996724 ENSG00000222788 ncRNA_exonic Human snRNA chr1:144944708 chr1:144944716 . . 0 29 hPsi_associated_SNPs_68 0 0 1 0 0 unknown 1 0.461312023608383 1.66893005393298e-06 1 hPsi_site_6831 iPseU_CNN:1.66893005393298e-06;iRNA_PseU:1 6832 chr1 144944716 144944716 1 + C G rs587659178 144944710 + 144944690 144944730 41 GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGCTTAAAT GGCTAAGATCAAGTGTAGTATCTGTTGTTATCAGCTTAAAT < 41bp 1 0.630849143904879 1 0.999999463558197 experiment 0.738301712190242 Functional Loss NA| LOC100996724 ENSG00000222788 ncRNA_exonic Human snRNA chr1:144944710 chr1:144944716 . . 0 27 hPsi_associated_SNPs_69 0 0 1 0 0 unknown 1 0.452776356441718 1.07288360595703e-06 1 hPsi_site_6832 iPseU_CNN:1.07288360595703e-06;iRNA_PseU:1 not specified not specified 6833 chr1 146651428 146651428 1 + T G rs12747038 146651433 + 146651413 146651453 41 TTGGGAAAAATTATTTGTGTTGGGGGAAATGTTGTGGGAGT TTGGGAAAAATTATTGGTGTTGGGGGAAATGTTGTGGGAGT < 41bp 1 0.294528362806219 1 0.970031976699829 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PDIA3P1 ENSG00000237188;ENSG00000273071 ncRNA_intronic Human other chr1:146651433 chr1:146651428 . . 0 16 hPsi_associated_SNPs_70 0 0 0 0 0 unknown 1 0.467549957670058 0.059936046600342 1 hPsi_site_6833 iPseU_CNN:0.059936046600342;iRNA_PseU:1 6834 chr1 146651451 146651451 1 + A G rs115428662 146651433 + 146651413 146651453 41 TTGGGAAAAATTATTTGTGTTGGGGGAAATGTTGTGGGAGT TTGGGAAAAATTATTTGTGTTGGGGGAAATGTTGTGGGGGT < 41bp 1 0.328119067166683 1 0.990382671356201 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PDIA3P1 ENSG00000237188;ENSG00000273071 ncRNA_intronic Human other chr1:146651433 chr1:146651451 . . 0 39 hPsi_associated_SNPs_71 0 0 0 0 0 unknown 1 0.999997675705334 0.0192346572875981 4.64858933257872e-06 hPsi_site_6834 iPseU_CNN:0.0192346572875981;iRNA_PseU:4.64858933257872e-06 Vitreoretinopathy Vitreoretinopathy 6835 chr1 151171098 151171098 1 + G A rs587721844 151171115 + 151171095 151171135 41 GACGGAGAAGGGGCGTTCGCTCCTTTGGGACTTTTCATGCC GACAGAGAAGGGGCGTTCGCTCCTTTGGGACTTTTCATGCC < 41bp 1 0.260721435719009 1 0.999975025653839 experiment 1 Functional Loss NA| PIP5K1A ENSG00000143398 UTR5 Human protein_coding chr1:151171115 chr1:151171098 . . 0 4 hPsi_associated_SNPs_75 0 0 1 0 0 Ribosome 1 0.441521417498878 4.99486923219994e-05 1 hPsi_site_6835 iPseU_CNN:4.99486923219994e-05;iRNA_PseU:1 6836 chr1 154234121 154234121 1 + G A rs36114119 154234130 + 154234110 154234150 41 GTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA GTGAATGCATCAGCCACCCCTTTCCAACAGCCGAGTGGATA < 41bp 1 0.697248382103351 1 0.298947811126709 experiment 0.605503235793298 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154234130 chr1:154234121 synonymous SNV . 0 12 hPsi_associated_SNPs_76 0 0 1 0 2 Nucleus 1 0.439213761344801 1 1 hPsi_site_6836 iPseU_CNN:1;iRNA_PseU:1 6837 chr1 161751741 161751741 1 + A G rs1058405 161751725 + 161751705 161751745 41 AACAATTTTGATAATCTTGATTTTGATTTGGATTTGATGCC AACAATTTTGATAATCTTGATTTTGATTTGGATTTGGTGCC < 41bp 1 0.278190213685363 1 0.999722838401794 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751725 chr1:161751741 nonsynonymous SNV 1.000 1 37 hPsi_associated_SNPs_77 0 0 1 0 2 Endoplasmic reticulum 1 0.439392290143509 0.000554323196412021 1 hPsi_site_6837 iPseU_CNN:0.000554323196412021;iRNA_PseU:1 6838 chr1 162495166 162495166 1 + G A rs537538514 162495184 + 162495164 162495204 41 TAGTGTTTCATTCCCTAAATTAATACCTGTGCTTCCTTGCC TAATGTTTCATTCCCTAAATTAATACCTGTGCTTCCTTGCC < 41bp 1 0.275213873354548 1 0.998583674430847 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UHMK1 ENSG00000152332 UTR3 Human protein_coding chr1:162495184 chr1:162495166 . . 0 3 hPsi_associated_SNPs_78 0 0 1 0 0 chromatin 1 0.927652084037237 0.00283265113830611 0.144695831925525 hPsi_site_6838 iPseU_CNN:0.00283265113830611;iRNA_PseU:0.144695831925525 6839 chr1 162495202 162495202 1 + G A rs575805961 162495184 + 162495164 162495204 41 TAGTGTTTCATTCCCTAAATTAATACCTGTGCTTCCTTGCC TAGTGTTTCATTCCCTAAATTAATACCTGTGCTTCCTTACC < 41bp 1 0.247965980607647 1 0.978538453578949 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UHMK1 ENSG00000152332 UTR3 Human protein_coding chr1:162495184 chr1:162495202 . . 0 39 hPsi_associated_SNPs_79 0 0 1 0 0 chromatin 1 0.458978891997264 0.0429230928421021 1 hPsi_site_6839 iPseU_CNN:0.0429230928421021;iRNA_PseU:1 6840 chr1 166823428 166823428 1 + G A rs540308634 166823414 + 166823394 166823434 41 AAGAAGAGTAGAAAATGGGTTCAACTCCTGTTTCGCTCCAC AAGAAGAGTAGAAAATGGGTTCAACTCCTGTTTCACTCCAC < 41bp 1 0.543496579257801 1 0.999833822250366 experiment 0.913006841484397 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control POGK ENSG00000143157 UTR3 Human protein_coding chr1:166823414 chr1:166823428 . . 0 35 hPsi_associated_SNPs_80 0 0 1 1 0 Nucleus 1 0.440355467459924 0.000332355499268022 1 hPsi_site_6840 iPseU_CNN:0.000332355499268022;iRNA_PseU:1 6841 chr1 173755445 173755445 1 + T G rs41299593 173755453 + 173755433 173755473 41 TTATACAAACAATGTATCATTATCTTCATTCTATAAGGTCA TTATACAAACAAGGTATCATTATCTTCATTCTATAAGGTCA < 41bp 1 0.511083669633671 1 0.999411821365356 experiment 0.977832660732659 Functional Loss NA| KLHL20 ENSG00000076321 UTR3 Human protein_coding chr1:173755453 chr1:173755445 . . 0 13 hPsi_associated_SNPs_81 0 0 1 1 0 Cytosol 1 0.438718550719992 0.001176357269288 1 hPsi_site_6841 iPseU_CNN:0.001176357269288;iRNA_PseU:1 6842 chr1 220756064 220756064 1 + A G rs551910165 220756071 + 220756051 220756091 41 AACATGAAACTGAATGTTGCTTTCTTTATCTGAATAACTAA AACATGAAACTGAGTGTTGCTTTCTTTATCTGAATAACTAA < 41bp 1 0.0808513898734538 1 0.995231688022614 experiment 1 Functional Loss NA| MARK1 ENSG00000116141 intronic Human protein_coding chr1:220756071 chr1:220756064 . . 0 14 hPsi_associated_SNPs_83 0 0 1 5 0 exosome 1 0.497275845758689 0.00953662395477206 1 hPsi_site_6842 iPseU_CNN:0.00953662395477206;iRNA_PseU:1 6843 chr1 228879508 228879508 1 + A G rs199588595 228879515 + 228879495 228879535 41 AAGACACCCAGAAAGGCTATTTTCAGATGAAATCGATATTA AAGACACCCAGAAGGGCTATTTTCAGATGAAATCGATATTA < 41bp 1 0.24293027823039 1 0.999084711074829 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RHOU ENSG00000116574 UTR3 Human protein_coding chr1:228879515 chr1:228879508 . . 0 14 hPsi_associated_SNPs_85 0 0 1 0 0 Ribosome 1 0.502221196072223 0.00183057785034202 0.995557607855553 hPsi_site_6843 iPseU_CNN:0.00183057785034202;iRNA_PseU:0.995557607855553 6844 chr1 228879522 228879522 1 + T C rs371898165 228879515 + 228879495 228879535 41 AAGACACCCAGAAAGGCTATTTTCAGATGAAATCGATATTA AAGACACCCAGAAAGGCTATTTTCAGACGAAATCGATATTA < 41bp 1 0.318911875548389 1 0.991472244262695 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RHOU ENSG00000116574 UTR3 Human protein_coding chr1:228879515 chr1:228879522 . . 0 28 hPsi_associated_SNPs_86 0 0 1 0 0 Ribosome 1 0.443811073854712 0.01705551147461 1 hPsi_site_6844 iPseU_CNN:0.01705551147461;iRNA_PseU:1 6845 chr1 230778384 230778384 1 + G A rs568973389 230778364 + 230778344 230778384 41 GCCGGCGGGATGGAGAAAAGTAGGATGAACCTGCCCAAGGG GCCGGCGGGATGGAGAAAAGTAGGATGAACCTGCCCAAGGA < 41bp 1 0.644001530193627 1 0.996950268745422 experiment 0.711996939612745 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COG2 ENSG00000135775 CDS Human protein_coding chr1:230778364 chr1:230778384 nonsynonymous SNV 0.995 1 41 hPsi_associated_SNPs_87 0 0 1 0 1 Cytosol 1 0.442975913331026 0.00609946250915594 1 hPsi_site_6845 iPseU_CNN:0.00609946250915594;iRNA_PseU:1 6846 chr2 27273696 27273696 1 + C G rs186601168 27273684 + 27273664 27273704 41 GTTGGTAGAGCGGAGGACTGTAGTGGATAGGGCGTGGCAAT GTTGGTAGAGCGGAGGACTGTAGTGGATAGGGGGTGGCAAT < 41bp 1 0.285933932581389 1 0.971914410591125 experiment 1 Functional Loss NA| AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273684 chr2:27273696 . . 0 33 hPsi_associated_SNPs_91 0 0 1 0 0 unknown 1 0.43871666966479 0.0561711788177499 1 hPsi_site_6846 iPseU_CNN:0.0561711788177499;iRNA_PseU:1 6847 chr2 32447828 32447828 1 + T C rs79320426 32447827 + 32447807 32447847 41 TATCTGTTATTGGTCTACTATTACAGGATGATTCTTCTTCC TATCTGTTATTGGTCTACTATCACAGGATGATTCTTCTTCC < 41bp 1 0.220072243911209 1 0.565708518028259 experiment 1 Functional Loss NA| SLC30A6 ENSG00000152683 UTR3 Human protein_coding chr2:32447827 chr2:32447828 . . 0 22 hPsi_associated_SNPs_92 0 0 1 0 0 Ribosome 1 0.438805382000398 0.868582963943482 1 hPsi_site_6847 iPseU_CNN:0.868582963943482;iRNA_PseU:1 6848 chr2 32447831 32447831 1 + A G rs568923883 32447827 + 32447807 32447847 41 TATCTGTTATTGGTCTACTATTACAGGATGATTCTTCTTCC TATCTGTTATTGGTCTACTATTACGGGATGATTCTTCTTCC < 41bp 1 0.434606872771514 1 0.993099927902222 experiment 1 Functional Loss NA| SLC30A6 ENSG00000152683 UTR3 Human protein_coding chr2:32447827 chr2:32447831 . . 0 25 hPsi_associated_SNPs_93 0 0 1 0 0 Ribosome 1 0.481805827178523 0.013800144195556 1 hPsi_site_6848 iPseU_CNN:0.013800144195556;iRNA_PseU:1 6849 chr2 73454256 73454256 1 + G A rs3188114 73454243 + 73454223 73454263 41 TCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCCCCTTA TCCTGGACCATGGAGCCAGGTGAAACCTGTCTGACCCCTTA < 41bp 1 0.584771078831161 1 0.0999745428562164 experiment 0.830457842337678 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73454243 chr2:73454256 . . 0 34 hPsi_associated_SNPs_95 0 0 1 0 0 Ribosome 1 0.598297176261947 1 0.803405647476106 hPsi_site_6849 iPseU_CNN:1;iRNA_PseU:0.803405647476106 6850 chr2 74720759 74720759 1 + T C rs114206720 74720758 + 74720738 74720778 41 GAGGGGGCTTGAGTCCCACCTTTCAGCTTGATGGATGCTCA GAGGGGGCTTGAGTCCCACCTCTCAGCTTGATGGATGCTCA < 41bp 1 0.187623570688339 1 0.483576446771622 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTC31 ENSG00000115282 UTR3 Human protein_coding chr2:74720758 chr2:74720759 . . 0 22 hPsi_associated_SNPs_96 0 0 1 2 0 Cytosol 1 0.491708740596486 1 1 hPsi_site_6850 iPseU_CNN:1;iRNA_PseU:1 6851 chr2 109403311 109403311 1 + G C rs138848875 109403329 + 109403309 109403349 41 CAGGATTTAGTAGTGGAGAGTCTCAAAAGCCGCTACGGACT CACGATTTAGTAGTGGAGAGTCTCAAAAGCCGCTACGGACT < 41bp 1 0.299471994591048 1 0.999934315681458 experiment 1 Functional Loss NA| CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109403329 chr2:109403311 nonsynonymous SNV 0.257 5 3 hPsi_associated_SNPs_97 0 0 1 0 1 chromatin 1 0.450083441226404 0.000131368637084073 1 hPsi_site_6851 iPseU_CNN:0.000131368637084073;iRNA_PseU:1 6852 chr2 122288478 122288478 1 + C A rs144448852 122288467 + 122288447 122288487 41 TTCTATTATAACCATCCTTTTCTTGGGGTTGCGCTACTGTC TTCTATTATAACCATCCTTTTCTTGGGGTTGAGCTACTGTC < 41bp 1 0.262391658170436 1 0.998914122581482 experiment 1 Functional Loss NA| RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288467 chr2:122288478 . . 0 32 hPsi_associated_SNPs_98 0 0 1 1 0 unknown 1 0.440019287942409 0.00217175483703591 1 hPsi_site_6852 iPseU_CNN:0.00217175483703591;iRNA_PseU:1 6853 chr2 132274467 132274467 1 + G A rs182773193 132274469 + 132274449 132274489 41 GCTACCTGCAGCCGTGGCGGTACGCGCCTGACAAGCAGGCT GCTACCTGCAGCCGTGGCAGTACGCGCCTGACAAGCAGGCT < 41bp 1 0.649795180182989 1 0.950092315673828 experiment 0.700409639634021 Functional Loss NA| LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132274469 chr2:132274467 . . 0 19 hPsi_associated_SNPs_99 0 0 0 0 2 unknown 1 0.438718693153618 0.099815368652344 1 hPsi_site_6853 iPseU_CNN:0.099815368652344;iRNA_PseU:1 6854 chr2 132276843 132276843 1 + G A rs561272906 132276840 + 132276820 132276860 41 GGAGAAGGCCCTGGAGTACCTGCGCCAGATATTCCGGGTAC GGAGAAGGCCCTGGAGTACCTGCACCAGATATTCCGGGTAC < 41bp 1 0.434598594024403 1 0.725265741348267 experiment 1 Functional Loss NA| LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132276840 chr2:132276843 . . 0 24 hPsi_associated_SNPs_101 0 0 1 0 1 unknown 1 0.439249813469452 0.549468517303466 1 hPsi_site_6854 iPseU_CNN:0.549468517303466;iRNA_PseU:1 6855 chr2 171818189 171818189 1 + G A rs77658592 171818194 + 171818174 171818214 41 TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGT TGTACCAACAGTACCATTATTGCCACCACAAGTAAACCAGT < 41bp 1 0.384117381441411 1 0.94676798582077 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818194 chr2:171818189 synonymous SNV . 0 16 hPsi_associated_SNPs_102 0 0 1 0 2 Ribosome 1 0.438820764567605 0.10646402835846 1 hPsi_site_6855 iPseU_CNN:0.10646402835846;iRNA_PseU:1 6856 chr2 207482840 207482840 1 + G A rs539068500 207482842 + 207482822 207482862 41 ATGGCATATATACAACAAGCTAGCAAGCCAATTCTCAGCAA ATGGCATATATACAACAAACTAGCAAGCCAATTCTCAGCAA < 41bp 1 0.48174984448872 1 0.497223794460297 experiment 1 Functional Loss NA| ADAM23 ENSG00000114948 UTR3 Human protein_coding chr2:207482842 chr2:207482840 . . 0 19 hPsi_associated_SNPs_103 0 0 1 0 0 Ribosome 1 0.454360473528827 1 1 hPsi_site_6856 iPseU_CNN:1;iRNA_PseU:1 6857 chr2 223799290 223799290 1 + G A rs141462096 223799284 + 223799264 223799304 41 ATTGGATTTGTTGTGCCAAATCAAAAGGAACTAACTGAACT ATTGGATTTGTTGTGCCAAATCAAAAAGAACTAACTGAACT < 41bp 1 0.043723989461288 1 0.985469579696655 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ACSL3 ENSG00000123983 CDS Human protein_coding chr2:223799284 chr2:223799290 synonymous SNV . 0 27 hPsi_associated_SNPs_104 0 0 1 0 1 Endoplasmic reticulum 1 0.67347555094316 0.0290608406066899 0.65304889811368 hPsi_site_6857 iPseU_CNN:0.0290608406066899;iRNA_PseU:0.65304889811368 6858 chr2 226518552 226518552 1 + G A rs181729549 226518546 + 226518526 226518566 41 GAGATTGAGACCATCCTGGCTAACACGGTGAGACCCCATCT GAGATTGAGACCATCCTGGCTAACACAGTGAGACCCCATCT < 41bp 1 0.681107822222581 1 0.998071014881134 experiment 0.637784355554839 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NYAP2 ENSG00000144460 UTR3 Human protein_coding chr2:226518546 chr2:226518552 . . 0 27 hPsi_associated_SNPs_105 0 0 0 0 0 nucleus 1 0.438933752547835 0.00385797023773193 1 hPsi_site_6858 iPseU_CNN:0.00385797023773193;iRNA_PseU:1 6859 chr2 232672785 232672785 1 + C T rs575110189 232672779 + 232672759 232672799 41 GTGAGGAGGGGGCACTCCTCTCCAGCCCCTGGTACCACAGT GTGAGGAGGGGGCACTCCTCTCCAGCTCCTGGTACCACAGT < 41bp 1 0.449796281167668 1 0.924829840660095 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COPS7B ENSG00000144524 UTR3 Human protein_coding chr2:232672779 chr2:232672785 . . 0 27 hPsi_associated_SNPs_106 0 0 1 0 0 Ribosome 1 0.438715649716516 0.15034031867981 1 hPsi_site_6859 iPseU_CNN:0.15034031867981;iRNA_PseU:1 6860 chr3 33185859 33185859 1 + A G rs4429578 33185871 + 33185851 33185891 41 CAAATCAAAGTGGAGAGTTCTCTCAGGTCAGGTCTGCAGCA CAAATCAAGGTGGAGAGTTCTCTCAGGTCAGGTCTGCAGCA < 41bp 1 0.503531199090667 1 0.893545925617218 experiment 0.992937601818666 Functional Loss NA| CRTAP ENSG00000272149 ncRNA_intronic Human antisense chr3:33185871 chr3:33185859 . . 0 9 hPsi_associated_SNPs_109 1 0 1 0 0 Endoplasmic reticulum 1 0.438700021539355 0.212908148765564 1 hPsi_site_6860 iPseU_CNN:0.212908148765564;iRNA_PseU:1 6861 chr3 132226100 132226100 1 + A G rs79953286 132226105 + 132226085 132226125 41 ATTGTGACAAAACTTATGGATCAGAATTTGTCTACAGTGAT ATTGTGACAAAACTTGTGGATCAGAATTTGTCTACAGTGAT < 41bp 1 0.383449421689357 1 0.996547222137451 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DNAJC13 ENSG00000138246 CDS Human protein_coding chr3:132226105 chr3:132226100 nonsynonymous SNV 1.000 2 16 hPsi_associated_SNPs_112 0 1 0 0 1 Nucleus 1 0.478339257395172 0.0069055557250981 1 hPsi_site_6861 iPseU_CNN:0.0069055557250981;iRNA_PseU:1 6862 chr3 136046528 136046528 1 + C A rs145135400 136046533 + 136046513 136046553 41 ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAG ACCTTTGTGGTGATAACAACTATGCCTGGCCCACCGCAGAG < 41bp 1 0.676109996733561 1 0.999791085720062 experiment 0.647780006532878 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136046533 chr3:136046528 nonsynonymous SNV 0.994 1 16 hPsi_associated_SNPs_113 0 0 1 0 2 Ribosome 1 0.438718531120295 0.000417828559875932 1 hPsi_site_6862 iPseU_CNN:0.000417828559875932;iRNA_PseU:1 6863 chr3 142747399 142747399 1 + A G rs141375076 142747417 + 142747397 142747437 41 CCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGA CCGTTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGA < 41bp 1 0.0892540416246912 1 0.222904205322266 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide U2SURP ENSG00000163714 CDS Human protein_coding chr3:142747417 chr3:142747399 synonymous SNV . 0 3 hPsi_associated_SNPs_114 0 0 1 0 1 Cytosol 1 0.941877025018091 1 0.116245949963818 hPsi_site_6863 iPseU_CNN:1;iRNA_PseU:0.116245949963818 6864 chr3 169490043 169490043 1 + G A rs569792232 169490030 + 169490010 169490050 41 AAAGTGGGGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT AAAGTGGGGTTTCCGTAGTGTAGTGGTTATCACATTCGCCT < 41bp 1 0.643369050611322 1 0.999816298484802 experiment 0.713261898777356 Functional Loss NA| MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490030 chr3:169490043 . . 0 34 hPsi_associated_SNPs_115 0 0 1 0 0 Nucleus 1 0.938764674233312 0.000367403030395952 0.122470651533376 hPsi_site_6864 iPseU_CNN:0.000367403030395952;iRNA_PseU:0.122470651533376 6865 chr3 169490054 169490054 1 + A C rs552675586 169490072 + 169490052 169490092 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACA ACCCGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACA < 41bp 1 0.678364396329991 1 0.999995112419128 experiment 0.643271207340017 Functional Loss NA| MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490072 chr3:169490054 . . 0 3 hPsi_associated_SNPs_116 0 0 1 0 0 Nucleus 1 0.438750299186669 9.77516174405224e-06 1 hPsi_site_6865 iPseU_CNN:9.77516174405224e-06;iRNA_PseU:1 6866 chr3 169490055 169490055 1 + C G rs145973490 169490044 + 169490024 169490064 41 GTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGT GTAGTGTAGTGGTTATCACGTTCGCCTAACAGGCGAAAGGT < 41bp 1 0.640778493285948 1 0.999768614768982 experiment 0.718443013428104 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490044 chr3:169490055 . . 0 32 hPsi_associated_SNPs_117 0 0 1 0 0 Nucleus 1 0.438771658940704 0.000462770462035911 1 hPsi_site_6866 iPseU_CNN:0.000462770462035911;iRNA_PseU:1 6867 chr3 169490055 169490055 1 + C G rs145973490 169490072 + 169490052 169490092 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACA ACAGGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACA < 41bp 1 0.644951141942304 1 0.999999046325684 experiment 0.710097716115393 Functional Loss NA| MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490072 chr3:169490055 . . 0 4 hPsi_associated_SNPs_118 0 0 1 0 0 Nucleus 1 0.443063541962975 1.90734863192432e-06 1 hPsi_site_6867 iPseU_CNN:1.90734863192432e-06;iRNA_PseU:1 6868 chr3 169490062 169490062 1 + G A rs372430905 169490072 + 169490052 169490092 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACA ACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGAAACACA < 41bp 1 0.578743969576571 1 0.999968647956848 experiment 0.842512060846858 Functional Loss NA| MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490072 chr3:169490062 . . 0 11 hPsi_associated_SNPs_119 0 0 1 0 0 Nucleus 1 0.438633047741625 6.2704086303933e-05 1 hPsi_site_6868 iPseU_CNN:6.2704086303933e-05;iRNA_PseU:1 6869 chr3 169490083 169490083 1 + C A rs139959878 169490072 + 169490052 169490092 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACA ACACGCGAAAGGTCCCCGGTTCGAAACCGGGAGGAAACACA < 41bp 1 0.511450201984948 1 0.999835968017578 experiment 0.977099596030104 Functional Loss NA| MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490072 chr3:169490083 . . 0 32 hPsi_associated_SNPs_120 0 0 1 0 0 Nucleus 1 0.445892251102537 0.000328063964843972 1 hPsi_site_6869 iPseU_CNN:0.000328063964843972;iRNA_PseU:1 6870 chr3 180949535 180949535 1 + C T rs114674034 180949555 + 180949535 180949575 41 CGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGAT TGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGAT < 41bp 1 0.561642121638038 1 0.999999642372131 experiment 0.876715756723923 Functional Loss NA| RNU6-2 ENSG00000206932 ncRNA_exonic Human snRNA chr3:180949555 chr3:180949535 . . 0 1 hPsi_associated_SNPs_122 0 0 1 0 0 unknown 1 0.999999188578262 7.15255737970821e-07 1.62284347693387e-06 hPsi_site_6870 iPseU_CNN:7.15255737970821e-07;iRNA_PseU:1.62284347693387e-06 6871 chr3 180949611 180949611 1 + C T rs189303026 180949610 + 180949590 180949630 41 CGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTT CGCAAGGATGACACGCAAATTTGTGAAGCGTTCCATATTTT < 41bp 1 0.389994542127564 1 0.999685883522034 experiment 1 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control RNU6-2 ENSG00000206932 ncRNA_exonic Human snRNA chr3:180949610 chr3:180949611 . . 0 22 hPsi_associated_SNPs_123 0 0 1 0 0 unknown 1 0.441110465204834 0.000628232955931951 1 hPsi_site_6871 iPseU_CNN:0.000628232955931951;iRNA_PseU:1 6872 chr3 185348351 185348351 1 + T C rs4687477 185348364 + 185348344 185348384 41 ACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCA ACTCTGACTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCA < 41bp 1 0.350473575424865 1 0.985351741313934 experiment 1 Functional Loss NA| SENP2 ENSG00000163904 UTR3 Human protein_coding chr3:185348364 chr3:185348351 . . 0 8 hPsi_associated_SNPs_124 0 1 1 5 0 Ribosome 1 0.968012594706867 0.029296517372132 0.0639748105862668 hPsi_site_6872 iPseU_CNN:0.029296517372132;iRNA_PseU:0.0639748105862668 6873 chr3 185348367 185348367 1 + C T rs185639674 185348364 + 185348344 185348384 41 ACTCTGATTATCCAAGCATCTTCCGAAGAGTGTTGTGGTCA ACTCTGATTATCCAAGCATCTTCTGAAGAGTGTTGTGGTCA < 41bp 1 0.449533228326689 1 0.181999891996384 experiment 1 Functional Loss NA| SENP2 ENSG00000163904 UTR3 Human protein_coding chr3:185348364 chr3:185348367 . . 0 24 hPsi_associated_SNPs_125 0 0 1 0 0 Ribosome 1 0.545220518868161 1 0.909558962263677 hPsi_site_6873 iPseU_CNN:1;iRNA_PseU:0.909558962263677 6874 chr4 1980994 1980994 1 + G A rs192215466 1981002 + 1980982 1981022 41 GAAATGTGTAGCGTAGGCTTTTCCCAAGGGTCGCTAGAAAC GAAATGTGTAGCATAGGCTTTTCCCAAGGGTCGCTAGAAAC < 41bp 1 0.562511798685077 1 0.741409838199615 experiment 0.874976402629845 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1981002 chr4:1980994 . . 0 13 hPsi_associated_SNPs_126 0 0 1 0 0 Nucleus 1 0.939549348685811 0.51718032360077 0.120901302628379 hPsi_site_6874 iPseU_CNN:0.51718032360077;iRNA_PseU:0.120901302628379 6875 chr4 6718124 6718124 1 + G A rs530613836 6718138 + 6718118 6718158 41 TTCGCCGCGCCGCTGCGGGCTACGCCGCCTGCCTGCTGCCC TTCGCCACGCCGCTGCGGGCTACGCCGCCTGCCTGCTGCCC < 41bp 1 0.655005175654819 1 0.992113351821899 experiment 0.689989648690361 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BLOC1S4 ENSG00000186222 CDS Human protein_coding chr4:6718138 chr4:6718124 nonsynonymous SNV 0.893 0 7 hPsi_associated_SNPs_128 0 0 1 0 0 Ribosome 1 0.547659180419717 0.0157732963562021 0.904681639160566 hPsi_site_6875 iPseU_CNN:0.0157732963562021;iRNA_PseU:0.904681639160566 6876 chr4 17609125 17609125 1 + A G rs62641702 17609132 + 17609112 17609152 41 CCAACAAAGATGAAGTTCCCTATCTACGGAAAGGCATGACT CCAACAAAGATGAGGTTCCCTATCTACGGAAAGGCATGACT < 41bp 1 0.397666810733785 1 0.999327182769775 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LAP3 ENSG00000002549 CDS Human protein_coding chr4:17609132 chr4:17609125 synonymous SNV . 0 14 hPsi_associated_SNPs_129 0 0 0 0 0 Ribosome 1 0.514033054948991 0.00134563446045011 0.971933890102018 hPsi_site_6876 iPseU_CNN:0.00134563446045011;iRNA_PseU:0.971933890102018 6877 chr4 26433458 26433458 1 + T A rs11549569 26433470 + 26433450 26433490 41 CCTTTTTTTAAAAAAAAATATGGACTTATTGTGGTTATCTG CCTTTTTTAAAAAAAAAATATGGACTTATTGTGGTTATCTG < 41bp 1 0.17459512585408 1 0.986609101295471 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433470 chr4:26433458 . . 0 9 hPsi_associated_SNPs_130 0 0 1 0 0 Endoplasmic reticulum 1 0.999989358285146 0.0267817974090581 2.12834297086406e-05 hPsi_site_6877 iPseU_CNN:0.0267817974090581;iRNA_PseU:2.12834297086406e-05 6878 chr4 26433459 26433459 1 + A T rs557658381 26433470 + 26433450 26433490 41 CCTTTTTTTAAAAAAAAATATGGACTTATTGTGGTTATCTG CCTTTTTTTTAAAAAAAATATGGACTTATTGTGGTTATCTG < 41bp 1 0.137208216859723 1 0.996163964271545 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433470 chr4:26433459 . . 0 10 hPsi_associated_SNPs_131 0 0 1 0 0 Endoplasmic reticulum 1 0.999989342121311 0.00767207145691007 2.13157573778489e-05 hPsi_site_6878 iPseU_CNN:0.00767207145691007;iRNA_PseU:2.13157573778489e-05 6879 chr4 26433467 26433467 1 + A G rs77336243 26433470 + 26433450 26433490 41 CCTTTTTTTAAAAAAAAATATGGACTTATTGTGGTTATCTG CCTTTTTTTAAAAAAAAGTATGGACTTATTGTGGTTATCTG < 41bp 1 0.138936569654373 1 0.960832536220551 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433470 chr4:26433467 . . 0 18 hPsi_associated_SNPs_132 0 0 1 0 0 Endoplasmic reticulum 1 0.493352645530033 0.078334927558898 1 hPsi_site_6879 iPseU_CNN:0.078334927558898;iRNA_PseU:1 6880 chr4 54257192 54257192 1 + T C rs567985726 54257193 + 54257173 54257213 41 TAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAAT TAGGTGCTGATCTTTCTGACTATTTTAATTATGGGTTTAAT < 41bp 1 0.497261842340014 1 0.993873953819275 experiment 1 Functional Loss NA| FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257193 chr4:54257192 synonymous SNV . 0 20 hPsi_associated_SNPs_133 0 0 1 0 1 Nucleus 1 0.620028172844826 0.01225209236145 0.759943654310349 hPsi_site_6880 iPseU_CNN:0.01225209236145;iRNA_PseU:0.759943654310349 6881 chr4 76735276 76735276 1 + G A rs573933296 76735265 + 76735245 76735285 41 TAATATAATTTATTGGCATTTTTGCTGAATAGGTTTAAGTC TAATATAATTTATTGGCATTTTTGCTGAATAAGTTTAAGTC < 41bp 1 0.664369816503012 1 0.442175656557083 experiment 0.671260366993977 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USO1 ENSG00000138768 UTR3 Human protein_coding chr4:76735265 chr4:76735276 . . 0 32 hPsi_associated_SNPs_134 0 0 0 0 0 Nucleus 1 0.438624031258981 1 1 hPsi_site_6881 iPseU_CNN:1;iRNA_PseU:1 6882 chr4 95588336 95588336 1 + C A rs75854018 95588347 + 95588327 95588367 41 ATTTATTTCCCATTTTAAAATTTTTAGCGGTAAGTTCAGAT ATTTATTTCACATTTTAAAATTTTTAGCGGTAAGTTCAGAT < 41bp 1 0.474838943909253 1 0.962513327598572 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PDLIM5 ENSG00000163110 UTR3 Human protein_coding chr4:95588347 chr4:95588336 . . 0 10 hPsi_associated_SNPs_135 0 0 1 1 0 Nucleus 1 0.439028212313446 0.074973344802856 1 hPsi_site_6882 iPseU_CNN:0.074973344802856;iRNA_PseU:1 6883 chr4 159825651 159825651 1 + T C rs147769815 159825660 + 159825640 159825680 41 CTGTTGACTGCTATTGCCAGTACTCATTCTCCTTATGTGGC CTGTTGACTGCCATTGCCAGTACTCATTCTCCTTATGTGGC < 41bp 1 0.488438291788046 1 0.990172743797302 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159825660 chr4:159825651 synonymous SNV . 0 12 hPsi_associated_SNPs_137 0 0 1 0 1 Ribosome 1 0.438701371315917 0.019654512405396 1 hPsi_site_6883 iPseU_CNN:0.019654512405396;iRNA_PseU:1 6884 chr4 175240835 175240835 1 + A G rs140007536 175240838 + 175240818 175240858 41 TGGAAATTTAGAATCCAAATTTTCTTAAACTTTAATAACTT TGGAAATTTAGAATCCAGATTTTCTTAAACTTTAATAACTT < 41bp 1 0.68983206920002 1 0.963128566741943 experiment 0.620335861599961 Functional Loss NA| CEP44 ENSG00000164118 UTR3 Human protein_coding chr4:175240838 chr4:175240835 . . 0 18 hPsi_associated_SNPs_138 0 0 1 0 0 Nucleus 1 0.476851669460913 0.0737428665161139 1 hPsi_site_6884 iPseU_CNN:0.0737428665161139;iRNA_PseU:1 6885 chr5 70945075 70945075 1 + A G rs10064079 70945064 + 70945044 70945084 41 GAGCCGGAAACTATGGGATGTGTGGCAGAGCATATAGGTAG GAGCCGGAAACTATGGGATGTGTGGCAGAGCGTATAGGTAG < 41bp 1 0.321800805108525 1 0.999425172805786 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70945064 chr5:70945075 synonymous SNV . 0 32 hPsi_associated_SNPs_140 2 0 1 1 1 Ribosome 1 0.98714478722586 0.00114965438842796 0.0257104255482803 hPsi_site_6885 iPseU_CNN:0.00114965438842796;iRNA_PseU:0.0257104255482803 6886 chr5 74894890 74894890 1 + A T rs540666965 74894900 + 74894880 74894920 41 ACATGGTGAGACCCTGTCTCTACTAAAACGATAAAAAAAAA ACATGGTGAGTCCCTGTCTCTACTAAAACGATAAAAAAAAA < 41bp 1 0.525855801550333 1 0.962219059467316 experiment 0.948288396899334 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control POLK ENSG00000248881 ncRNA_intronic Human antisense chr5:74894900 chr5:74894890 . . 0 11 hPsi_associated_SNPs_141 0 0 1 0 0 chromatin 1 0.698515344784206 0.075561881065368 0.602969310431589 hPsi_site_6886 iPseU_CNN:0.075561881065368;iRNA_PseU:0.602969310431589 6887 chr5 74894908 74894908 1 + C T rs112640644 74894900 + 74894880 74894920 41 ACATGGTGAGACCCTGTCTCTACTAAAACGATAAAAAAAAA ACATGGTGAGACCCTGTCTCTACTAAAATGATAAAAAAAAA < 41bp 1 0.341626376239255 1 0.995243072509766 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control POLK ENSG00000248881 ncRNA_intronic Human antisense chr5:74894900 chr5:74894908 . . 0 29 hPsi_associated_SNPs_142 0 0 0 0 0 chromatin 1 0.909621924834395 0.00951385498046808 0.18075615033121 hPsi_site_6887 iPseU_CNN:0.00951385498046808;iRNA_PseU:0.18075615033121 6888 chr5 78919157 78919157 1 + A G rs201783099 78919171 + 78919151 78919191 41 GTAGTTAACCAGATAGTGCCTTTATCAGGTGAACGAAGATA GTAGTTGACCAGATAGTGCCTTTATCAGGTGAACGAAGATA < 41bp 1 0.67564316393875 1 0.991967439651489 experiment 0.6487136721225 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PAPD4 ENSG00000164329 CDS Human protein_coding chr5:78919171 chr5:78919157 nonsynonymous SNV 1.000 0 7 hPsi_associated_SNPs_143 0 0 1 0 1 Ribosome 1 0.438718592993288 0.0160651206970219 1 hPsi_site_6888 iPseU_CNN:0.0160651206970219;iRNA_PseU:1 6889 chr5 82836403 82836403 1 + C T rs149880697 82836401 + 82836381 82836421 41 TCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAA TCCAAGACCGTTTCAGGGAATTTGAGGATTCCACCTTAAAA < 41bp 1 0.349128615987877 1 0.997318863868713 experiment 1 Functional Loss NA| VCAN ENSG00000038427 CDS Human protein_coding chr5:82836401 chr5:82836403 synonymous SNV . 0 23 hPsi_associated_SNPs_144 2 0 1 0 0 Ribosome 1 0.438718592938767 0.00536227226257391 1 hPsi_site_6889 iPseU_CNN:0.00536227226257391;iRNA_PseU:1 6890 chr5 126862430 126862430 1 + A C rs148562350 126862419 + 126862399 126862439 41 GAGCAAGAAGACCCTAGAATTACTAGAGGTCAGGATGAAGC GAGCAAGAAGACCCTAGAATTACTAGAGGTCCGGATGAAGC < 41bp 1 0.335113203930351 1 0.998869478702545 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126862419 chr5:126862430 nonsynonymous SNV 0.839 0 32 hPsi_associated_SNPs_145 0 0 1 0 1 Nucleus 1 0.438715345094231 0.00226104259490989 1 hPsi_site_6890 iPseU_CNN:0.00226104259490989;iRNA_PseU:1 6891 chr5 158745050 158745050 1 + A G rs3213106 158745060 + 158745040 158745080 41 CTGGCTACCAACCATCCTTTTCTTGGGGTTGGGCTACTGTC CTGGCTACCAGCCATCCTTTTCTTGGGGTTGGGCTACTGTC < 41bp 1 0.310810462965194 1 0.997725248336792 experiment 1 Functional Loss NA| IL12B ENSG00000221601 ncRNA_exonic Human snRNA chr5:158745060 chr5:158745050 . . 0 11 hPsi_associated_SNPs_146 0 0 0 0 0 exosome 1 0.495978848612197 0.00454950332641602 1 hPsi_site_6891 iPseU_CNN:0.00454950332641602;iRNA_PseU:1 6892 chr5 162900426 162900426 1 + C T rs77608747 162900423 + 162900403 162900443 41 GGAAAAATACAAGCTAGATATTGCCCAGTTAGAAGAAAATT GGAAAAATACAAGCTAGATATTGTCCAGTTAGAAGAAAATT < 41bp 1 0.31079093243344 1 0.952290177345276 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HMMR ENSG00000072571 CDS Human protein_coding chr5:162900423 chr5:162900426 nonsynonymous SNV 0.990 0 24 hPsi_associated_SNPs_147 0 0 1 0 1 Cytosol 1 0.511339864031883 0.095419645309448 0.977320271936235 hPsi_site_6892 iPseU_CNN:0.095419645309448;iRNA_PseU:0.977320271936235 6893 chr5 172461659 172461659 1 + G A rs138021157 172461672 + 172461652 172461692 41 GAGATACGTTACTCTCTCCTTGGAATCTGTGGATTTGAAGA GAGATACATTACTCTCTCCTTGGAATCTGTGGATTTGAAGA < 41bp 1 0.220154414066743 1 0.850484728813171 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461672 chr5:172461659 . . 0 8 hPsi_associated_SNPs_148 0 0 1 1 0 Ribosome 1 0.440227351560263 0.299030542373658 1 hPsi_site_6893 iPseU_CNN:0.299030542373658;iRNA_PseU:1 6894 chr5 180591159 180591159 1 + C G rs547731362 180591166 + 180591146 180591186 41 GCGTGCAAGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT GCGTGCAAGTTTCGGTAGTGTAGTGGTTATCACGTTCGCCT < 41bp 1 0.621141486752114 1 0.999999761581421 experiment 0.757717026495772 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591166 chr5:180591159 . . 0 14 hPsi_associated_SNPs_149 0 0 0 0 0 unknown 1 0.486230202926618 4.7683715798108e-07 1 hPsi_site_6894 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:1 6895 chr5 180591167 180591167 1 + A G rs180806241 180591166 + 180591146 180591186 41 GCGTGCAAGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT GCGTGCAAGTTTCCGTAGTGTGGTGGTTATCACGTTCGCCT < 41bp 1 0.216668940957278 1 0.972382307052612 experiment 1 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591166 chr5:180591167 . . 0 22 hPsi_associated_SNPs_150 0 0 0 0 0 unknown 1 0.438884263276767 0.0552353858947761 1 hPsi_site_6895 iPseU_CNN:0.0552353858947761;iRNA_PseU:1 6896 chr5 180591171 180591171 1 + G A rs150211676 180591166 + 180591146 180591186 41 GCGTGCAAGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT GCGTGCAAGTTTCCGTAGTGTAGTGATTATCACGTTCGCCT < 41bp 1 0.633742264439679 1 0.999994158744812 experiment 0.732515471120642 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591166 chr5:180591171 . . 0 26 hPsi_associated_SNPs_151 0 0 0 0 0 unknown 1 0.963407618248234 1.16825103759766e-05 0.0731847635035323 hPsi_site_6896 iPseU_CNN:1.16825103759766e-05;iRNA_PseU:0.0731847635035323 6897 chr5 180591173 180591173 1 + T A rs568955071 180591166 + 180591146 180591186 41 GCGTGCAAGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT GCGTGCAAGTTTCCGTAGTGTAGTGGTAATCACGTTCGCCT < 41bp 1 0.597459052990854 1 0.999997854232788 experiment 0.805081894018291 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591166 chr5:180591173 . . 0 28 hPsi_associated_SNPs_152 0 0 0 0 0 unknown 1 0.999995388251087 4.29153442405017e-06 9.22349782639387e-06 hPsi_site_6897 iPseU_CNN:4.29153442405017e-06;iRNA_PseU:9.22349782639387e-06 6898 chr5 180591222 180591222 1 + A G rs545580560 180591208 + 180591188 180591228 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACAGA ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGGAACAGA < 41bp 1 0.542270420194137 1 0.999999642372131 experiment 0.915459159611727 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591208 chr5:180591222 . . 0 35 hPsi_associated_SNPs_154 0 0 1 0 0 unknown 1 0.476250027542974 7.15255737970821e-07 1 hPsi_site_6898 iPseU_CNN:7.15255737970821e-07;iRNA_PseU:1 6899 chr5 180591225 180591225 1 + C T rs576208610 180591208 + 180591188 180591228 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACAGA ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAATAGA < 41bp 1 0.487485584372515 1 0.999965250492096 experiment 1 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591208 chr5:180591225 . . 0 38 hPsi_associated_SNPs_155 0 0 1 0 0 unknown 1 0.602784359735242 6.94990158081055e-05 0.794431280529517 hPsi_site_6899 iPseU_CNN:6.94990158081055e-05;iRNA_PseU:0.794431280529517 6900 chr5 180596614 180596614 1 + C A rs537848119 180596622 + 180596602 180596642 41 GCGTGCAAGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT GCGTGCAAGTTTACGTAGTGTAGTGGTTATCACGTTCGCCT < 41bp 1 0.631774312821828 1 0.999982118606567 experiment 0.736451374356344 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180596622 chr5:180596614 . . 0 13 hPsi_associated_SNPs_156 0 0 0 0 0 unknown 1 0.445776987066482 3.57627868659005e-05 1 hPsi_site_6900 iPseU_CNN:3.57627868659005e-05;iRNA_PseU:1 6901 chr5 180600680 180600680 1 + C T rs551071148 180600662 + 180600642 180600682 41 CCATGCAGGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT CCATGCAGGTTTCCGTAGTGTAGTGGTTATCACGTTCGTCT < 41bp 1 0.56525938755578 1 0.999722719192505 experiment 0.869481224888441 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600662 chr5:180600680 . . 0 39 hPsi_associated_SNPs_159 0 0 1 0 0 unknown 1 0.93710729299207 0.000554561614990012 0.125785414015861 hPsi_site_6901 iPseU_CNN:0.000554561614990012;iRNA_PseU:0.125785414015861 6902 chr5 180600702 180600702 1 + G C rs59711195 180600704 + 180600684 180600724 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACC ACACGCGAAAGGTCCCCGCTTCGAAACCGGGCGGAAACACC < 41bp 1 0.445085897791624 1 0.999823331832886 experiment 1 Functional Loss NA| OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600704 chr5:180600702 . . 0 19 hPsi_associated_SNPs_160 0 0 1 0 0 unknown 1 0.440995949150989 0.000353336334228072 1 hPsi_site_6902 iPseU_CNN:0.000353336334228072;iRNA_PseU:1 6903 chr5 180614748 180614748 1 + C G rs571621440 180614764 + 180614744 180614784 41 GTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGT GTCTGTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGT < 41bp 1 0.61964920110358 1 0.99999988079071 experiment 0.760701597792841 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614764 chr5:180614748 . . 0 5 hPsi_associated_SNPs_161 0 0 1 0 0 unknown 1 0.445322768496495 2.38418579989741e-07 1 hPsi_site_6903 iPseU_CNN:2.38418579989741e-07;iRNA_PseU:1 6904 chr5 180614770 180614770 1 + C T rs569033796 180614764 + 180614744 180614784 41 GTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGT GTCTCTTCGGGGGCGTGGGTTCGAATTCCACCGCTGCCAGT < 41bp 1 0.54455096037572 1 0.996321499347687 experiment 0.910898079248561 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614764 chr5:180614770 . . 0 27 hPsi_associated_SNPs_162 0 0 1 0 0 unknown 1 0.438718802079116 0.00735700130462602 1 hPsi_site_6904 iPseU_CNN:0.00735700130462602;iRNA_PseU:1 6905 chr5 180614775 180614775 1 + C A rs572539960 180614764 + 180614744 180614784 41 GTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGT GTCTCTTCGGGGGCGTGGGTTCGAATCCCACAGCTGCCAGT < 41bp 1 0.66349298130849 1 0.99999988079071 experiment 0.67301403738302 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614764 chr5:180614775 . . 0 32 hPsi_associated_SNPs_163 0 0 1 0 0 unknown 1 0.955962027192717 2.38418579989741e-07 0.0880759456145659 hPsi_site_6905 iPseU_CNN:2.38418579989741e-07;iRNA_PseU:0.0880759456145659 6906 chr5 180634819 180634819 1 + C G rs181561952 180634809 + 180634789 180634829 41 TTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGC TTAATCTCAGGGTCGTGGGTTCGAGCCCCAGGTTGGGCGGC < 41bp 1 0.667619898431397 1 0.999868810176849 experiment 0.664760203137207 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634809 chr5:180634819 . . 0 31 hPsi_associated_SNPs_164 0 0 1 0 0 unknown 1 0.445266383820527 0.000262379646301936 1 hPsi_site_6906 iPseU_CNN:0.000262379646301936;iRNA_PseU:1 6907 chr5 180691213 180691213 1 + G A rs571503964 180691203 + 180691183 180691223 41 AGGATTGTTTGAGCCAGCTGTTTGAGACCAGCCTGGGCAAC AGGATTGTTTGAGCCAGCTGTTTGAGACCAACCTGGGCAAC < 41bp 1 0.631496458942379 1 0.99926483631134 experiment 0.737007082115241 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRIM52-AS1 ENSG00000248275 ncRNA_exonic Human processed_transcript chr5:180691203 chr5:180691213 . . 0 31 hPsi_associated_SNPs_166 0 0 0 0 0 unknown 1 0.644204721095088 0.00147032737732 0.711590557809824 hPsi_site_6907 iPseU_CNN:0.00147032737732;iRNA_PseU:0.711590557809824 6908 chr6 17543187 17543187 1 + A C rs28360582 17543174 + 17543154 17543194 41 TATTCAGATAAAAGGGAAAGTAAACTCCATTATAATTGGTA TATTCAGATAAAAGGGAAAGTAAACTCCATTATCATTGGTA < 41bp 1 0.688788589611939 1 0.0858649909496307 experiment 0.622422820776122 Functional Loss NA| CAP2 ENSG00000112186 CDS Human protein_coding chr6:17543174 chr6:17543187 synonymous SNV . 0 34 hPsi_associated_SNPs_167 0 0 1 4 1 exosome 1 0.472273182264457 1 1 hPsi_site_6908 iPseU_CNN:1;iRNA_PseU:1 6909 chr6 24775181 24775181 1 + G T rs2754775 24775185 + 24775165 24775205 41 GTCAGTTGGTCACGTGGTTGTTCGGAGCGGGCGAGCGGAGT GTCAGTTGGTCACGTGTTTGTTCGGAGCGGGCGAGCGGAGT < 41bp 1 0.646272436248513 1 0.98792290687561 experiment 0.707455127502974 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GMNN ENSG00000112312 UTR5 Human protein_coding chr6:24775185 chr6:24775181 . . 0 17 hPsi_associated_SNPs_170 0 0 1 0 1 Ribosome 1 0.438827572655029 0.02415418624878 1 hPsi_site_6909 iPseU_CNN:0.02415418624878;iRNA_PseU:1 6910 chr6 26327867 26327867 1 + T A rs189870640 26327855 + 26327835 26327875 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAGAAATCCATTGGGGTCACCCCGCGC < 41bp 1 0.481139793258144 1 0.999691426753998 experiment 1 Functional Loss NA| HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26327855 chr6:26327867 . . 0 33 hPsi_associated_SNPs_172 0 0 1 0 0 unknown 1 0.881394557039651 0.00061714649200395 0.237210885920699 hPsi_site_6910 iPseU_CNN:0.00061714649200395;iRNA_PseU:0.237210885920699 not provided not provided 6911 chr6 26521488 26521488 1 + G A rs192544521 26521500 + 26521480 26521520 41 TCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACAGT TCTCCCCTAGAGGCGTGGGTTCGAATCCCACTCCTGACAGT < 41bp 1 0.61128565559748 1 0.999997138977051 experiment 0.777428688805039 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521500 chr6:26521488 . . 0 9 hPsi_associated_SNPs_175 0 0 1 0 0 unknown 1 0.438717455841534 5.72204589799341e-06 1 hPsi_site_6911 iPseU_CNN:5.72204589799341e-06;iRNA_PseU:1 6912 chr6 26526941 26526941 1 + G C rs11754138 26526943 + 26526923 26526963 41 TCAGGACTTGTTCATTAGGTTGGCAGCAGAGGGGCAGAAGG TCAGGACTTGTTCATTAGCTTGGCAGCAGAGGGGCAGAAGG < 41bp 1 0.26966878283502 1 0.98776113986969 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide HCG11 ENSG00000261353;ENSG00000228223 upstream;downstream Human other chr6:26526943 chr6:26526941 . . 0 19 hPsi_associated_SNPs_176 0 0 0 0 0 unknown 1 0.438733615866463 0.0244777202606199 1 hPsi_site_6912 iPseU_CNN:0.0244777202606199;iRNA_PseU:1 6913 chr6 26538287 26538287 1 + C G rs190949316 26538294 + 26538274 26538314 41 CTTAGTGGGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT CTTAGTGGGTTTCGGTAGTGTAGTGGTTATCACGTTCGCCT < 41bp 1 0.411224061325466 1 0.999958276748657 experiment 1 Functional Loss NA| HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538294 chr6:26538287 . . 0 14 hPsi_associated_SNPs_177 0 0 1 0 0 Cytosol 1 0.450631972222971 8.3446502685991e-05 1 hPsi_site_6913 iPseU_CNN:8.3446502685991e-05;iRNA_PseU:1 6914 chr6 26538292 26538292 1 + T C rs147742184 26538294 + 26538274 26538314 41 CTTAGTGGGTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT CTTAGTGGGTTTCCGTAGCGTAGTGGTTATCACGTTCGCCT < 41bp 1 0.679037143049251 1 0.99723482131958 experiment 0.641925713901498 Functional Loss NA| HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538294 chr6:26538292 . . 0 19 hPsi_associated_SNPs_178 0 0 1 0 0 Cytosol 1 0.439700419762519 0.00553035736084007 1 hPsi_site_6914 iPseU_CNN:0.00553035736084007;iRNA_PseU:1 6915 chr6 26538326 26538326 1 + G A rs190989298 26538336 + 26538316 26538356 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACG ACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGAAACACG < 41bp 1 0.669277732143155 1 0.999996602535248 experiment 0.66144453571369 Functional Loss NA| HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538336 chr6:26538326 . . 0 11 hPsi_associated_SNPs_179 0 0 1 0 0 Cytosol 1 0.438770298181633 6.79492950395044e-06 1 hPsi_site_6915 iPseU_CNN:6.79492950395044e-06;iRNA_PseU:1 6916 chr6 26538330 26538330 1 + C A rs140930809 26538336 + 26538316 26538356 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACG ACACGCGAAAGGTCACCGGTTCGAAACCGGGCGGAAACACG < 41bp 1 0.496522774645834 1 0.999999225139618 experiment 1 Functional Loss NA| HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538336 chr6:26538330 . . 0 15 hPsi_associated_SNPs_180 0 0 1 0 0 Cytosol 1 0.452417598196068 1.54972076393811e-06 1 hPsi_site_6916 iPseU_CNN:1.54972076393811e-06;iRNA_PseU:1 6917 chr6 26538343 26538343 1 + C A rs569367600 26538336 + 26538316 26538356 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACG ACACGCGAAAGGTCCCCGGTTCGAAACAGGGCGGAAACACG < 41bp 1 0.448874298364636 1 0.999989032745361 experiment 1 Functional Loss NA| HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538336 chr6:26538343 . . 0 28 hPsi_associated_SNPs_181 0 0 1 0 0 Cytosol 1 0.801038716042262 2.19345092780099e-05 0.397922567915476 hPsi_site_6917 iPseU_CNN:2.19345092780099e-05;iRNA_PseU:0.397922567915476 6918 chr6 26538349 26538349 1 + G A rs537828380 26538336 + 26538316 26538356 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACG ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGAAAACACG < 41bp 1 0.570629290530079 1 0.999999761581421 experiment 0.858741418939842 Functional Loss NA| HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538336 chr6:26538349 . . 0 34 hPsi_associated_SNPs_182 0 0 1 0 0 Cytosol 1 0.438731277834837 4.7683715798108e-07 1 hPsi_site_6918 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:1 6919 chr6 27125947 27125947 1 + A C rs564047240 27125959 + 27125939 27125979 41 GTGGCCGCAGCAACCTCGGTTCGAATCCGAGTCACGGCAGT GTGGCCGCCGCAACCTCGGTTCGAATCCGAGTCACGGCAGT < 41bp 1 0.691338083611257 1 0.999997496604919 experiment 0.617323832777487 Functional Loss NA| MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27125959 chr6:27125947 . . 0 9 hPsi_associated_SNPs_188 0 0 1 0 0 unknown 1 0.440105827062215 5.00679016202099e-06 1 hPsi_site_6919 iPseU_CNN:5.00679016202099e-06;iRNA_PseU:1 6920 chr6 27203308 27203308 1 + A G rs79513035 27203300 + 27203280 27203320 41 CTAAGCGAGTTTCCGTAGTGTAGTGGTTATCACGTTTGCCT CTAAGCGAGTTTCCGTAGTGTAGTGGTTGTCACGTTTGCCT < 41bp 1 0.69257335896353 1 0.999981164932251 experiment 0.614853282072939 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203300 chr6:27203308 . . 0 29 hPsi_associated_SNPs_189 0 0 1 0 0 unknown 1 0.461166767515936 3.76701354980469e-05 1 hPsi_site_6920 iPseU_CNN:3.76701354980469e-05;iRNA_PseU:1 6921 chr6 27203319 27203319 1 + C A rs9468016 27203300 + 27203280 27203320 41 CTAAGCGAGTTTCCGTAGTGTAGTGGTTATCACGTTTGCCT CTAAGCGAGTTTCCGTAGTGTAGTGGTTATCACGTTTGCAT < 41bp 1 0.516856147740672 1 0.998991131782532 experiment 0.966287704518655 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203300 chr6:27203319 . . 0 40 hPsi_associated_SNPs_191 0 0 1 0 0 unknown 1 0.446579400272773 0.00201773643493608 1 hPsi_site_6921 iPseU_CNN:0.00201773643493608;iRNA_PseU:1 Leigh syndrome Leigh syndrome 6922 chr6 27203332 27203332 1 + G A rs183802162 27203314 + 27203294 27203334 41 GTAGTGTAGTGGTTATCACGTTTGCCTAACACGCGAAAGGT GTAGTGTAGTGGTTATCACGTTTGCCTAACACGCGAAAAGT < 41bp 1 0.684550640643132 1 0.998825073242188 experiment 0.630898718713736 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203314 chr6:27203332 . . 0 39 hPsi_associated_SNPs_193 0 0 1 0 0 unknown 1 0.566371584020092 0.00234985351562389 0.867256831959816 hPsi_site_6922 iPseU_CNN:0.00234985351562389;iRNA_PseU:0.867256831959816 6923 chr6 27203332 27203332 1 + G A rs183802162 27203342 + 27203322 27203362 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGAAACAGA ACACGCGAAAAGTCCCCGGTTCGAAACCGGGCAGAAACAGA < 41bp 1 0.507973230239002 1 0.999997496604919 experiment 0.984053539521996 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203342 chr6:27203332 . . 0 11 hPsi_associated_SNPs_194 0 0 1 0 0 unknown 1 0.438813584337195 5.00679016202099e-06 1 hPsi_site_6923 iPseU_CNN:5.00679016202099e-06;iRNA_PseU:1 6924 chr6 27203335 27203335 1 + C A rs72843641 27203342 + 27203322 27203362 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGAAACAGA ACACGCGAAAGGTACCCGGTTCGAAACCGGGCAGAAACAGA < 41bp 1 0.591470495530999 1 1 experiment 0.817059008938003 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203342 chr6:27203335 . . 0 14 hPsi_associated_SNPs_195 0 0 1 0 0 unknown 1 0.438718564027203 0 1 hPsi_site_6924 iPseU_CNN:0;iRNA_PseU:1 6925 chr6 27203350 27203350 1 + G A rs116074330 27203342 + 27203322 27203362 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGAAACAGA ACACGCGAAAGGTCCCCGGTTCGAAACCAGGCAGAAACAGA < 41bp 1 0.476523278783862 1 0.999999403953552 experiment 1 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203342 chr6:27203350 . . 0 29 hPsi_associated_SNPs_196 0 0 1 0 0 unknown 1 0.439691686521047 1.1920928959519e-06 1 hPsi_site_6925 iPseU_CNN:1.1920928959519e-06;iRNA_PseU:1 6926 chr6 27203359 27203359 1 + C G rs561257960 27203342 + 27203322 27203362 41 ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGAAACAGA ACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGAAAGAGA < 41bp 1 0.567472484010691 1 0.999999642372131 experiment 0.865055031978618 Functional Loss NA| MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203342 chr6:27203359 . . 0 38 hPsi_associated_SNPs_197 0 0 1 0 0 unknown 1 0.46690100349126 7.15255737970821e-07 1 hPsi_site_6926 iPseU_CNN:7.15255737970821e-07;iRNA_PseU:1 6927 chr6 27446603 27446603 1 + G C rs560586012 27446618 + 27446598 27446638 41 TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGG TGGCCCAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGG < 41bp 1 0.421232686379909 1 0.999926745891571 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446618 chr6:27446603 . . 0 6 hPsi_associated_SNPs_198 0 0 1 0 0 unknown 1 0.439741764041021 0.00014650821685791 1 hPsi_site_6927 iPseU_CNN:0.00014650821685791;iRNA_PseU:1 Acrodysostosis Acrodysostosis 6928 chr6 27446642 27446642 1 + C G rs112066464 27446629 + 27446609 27446649 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAGAAATCCATTGGGGTCTGCCCGCGC < 41bp 1 0.626421613626894 1 0.999852776527405 experiment 0.747156772746212 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446629 chr6:27446642 . . 0 34 hPsi_associated_SNPs_199 0 0 1 0 0 unknown 1 0.438718593088551 0.000294446945189986 1 hPsi_site_6928 iPseU_CNN:0.000294446945189986;iRNA_PseU:1 6929 chr6 27446669 27446669 1 + T A rs181367571 27446654 + 27446634 27446674 41 TGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGG TGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACAACGGG < 41bp 1 0.667109935373307 1 0.999991655349731 experiment 0.665780129253385 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446654 chr6:27446669 . . 0 36 hPsi_associated_SNPs_200 0 0 1 0 0 unknown 1 0.999994673095694 1.66893005379976e-05 1.06538086115382e-05 hPsi_site_6929 iPseU_CNN:1.66893005379976e-05;iRNA_PseU:1.06538086115382e-05 6930 chr6 27463627 27463627 1 + G A rs147439337 27463620 + 27463600 27463640 41 TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGG TGGCCGAGTGGTTAAGGCGATGGACTAAAAATCCATTGGGG < 41bp 1 0.353898379252436 1 0.999927878379822 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463620 chr6:27463627 . . 0 28 hPsi_associated_SNPs_201 0 0 1 0 0 unknown 1 0.438718594263072 0.000144243240356001 1 hPsi_site_6930 iPseU_CNN:0.000144243240356001;iRNA_PseU:1 6931 chr6 27463627 27463627 1 + G A rs147439337 27463631 + 27463611 27463651 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAAAAATCCATTGGGGTCTCCCCGCGC < 41bp 1 0.624203110528922 1 0.999926447868347 experiment 0.751593778942156 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463631 chr6:27463627 . . 0 17 hPsi_associated_SNPs_202 0 0 1 0 0 unknown 1 0.438718592995102 0.000147104263306108 1 hPsi_site_6931 iPseU_CNN:0.000147104263306108;iRNA_PseU:1 6932 chr6 27463634 27463634 1 + A C rs12211931 27463620 + 27463600 27463640 41 TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGG TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCCTTGGGG < 41bp 1 0.458005308929835 1 0.999995589256287 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463620 chr6:27463634 . . 0 35 hPsi_associated_SNPs_203 0 0 1 0 0 unknown 1 0.438718383620889 8.82148742609168e-06 1 hPsi_site_6932 iPseU_CNN:8.82148742609168e-06;iRNA_PseU:1 6933 chr6 27463634 27463634 1 + A C rs12211931 27463631 + 27463611 27463651 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAGAAATCCCTTGGGGTCTCCCCGCGC < 41bp 1 0.517563738937073 1 0.999923408031464 experiment 0.964872522125854 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463631 chr6:27463634 . . 0 24 hPsi_associated_SNPs_204 0 0 1 0 0 unknown 1 0.438718592279484 0.000153183937072088 1 hPsi_site_6933 iPseU_CNN:0.000153183937072088;iRNA_PseU:1 6934 chr6 27470859 27470859 1 + A C rs143290485 27470845 + 27470825 27470865 41 TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGG TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCCTTGGGG < 41bp 1 0.429221828575312 1 0.999995589256287 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470845 chr6:27470859 . . 0 35 hPsi_associated_SNPs_205 0 0 1 0 0 unknown 1 0.438718383620889 8.82148742609168e-06 1 hPsi_site_6934 iPseU_CNN:8.82148742609168e-06;iRNA_PseU:1 6935 chr6 27470859 27470859 1 + A C rs143290485 27470856 + 27470836 27470876 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAGAAATCCCTTGGGGTCTCCCCGCGC < 41bp 1 0.620590134647659 1 0.999923408031464 experiment 0.758819730704682 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470856 chr6:27470859 . . 0 24 hPsi_associated_SNPs_206 0 0 1 0 0 unknown 1 0.438718592279484 0.000153183937072088 1 hPsi_site_6935 iPseU_CNN:0.000153183937072088;iRNA_PseU:1 6936 chr6 27470860 27470860 1 + T C rs184423987 27470845 + 27470825 27470865 41 TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGG TGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCACTGGGG < 41bp 1 0.371302337036827 1 0.99999588727951 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470845 chr6:27470860 . . 0 36 hPsi_associated_SNPs_207 0 0 1 0 0 unknown 1 0.56516466200487 8.22544097989208e-06 0.86967067599026 hPsi_site_6936 iPseU_CNN:8.22544097989208e-06;iRNA_PseU:0.86967067599026 Charcot-Marie-Tooth, Intermediate Charcot-Marie-Tooth, Intermediate 6937 chr6 27470860 27470860 1 + T C rs184423987 27470856 + 27470836 27470876 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAGAAATCCACTGGGGTCTCCCCGCGC < 41bp 1 0.345519660901864 1 0.997186303138733 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470856 chr6:27470860 . . 0 25 hPsi_associated_SNPs_208 0 0 1 0 0 unknown 1 0.639352940717515 0.00562739372253396 0.72129411856497 hPsi_site_6937 iPseU_CNN:0.00562739372253396;iRNA_PseU:0.72129411856497 6938 chr6 27470871 27470871 1 + C A rs148315012 27470856 + 27470836 27470876 41 TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCCCGCGC TTAAGGCGATGGACTAGAAATCCATTGGGGTCTCCACGCGC < 41bp 1 0.598433817423281 1 0.999988496303558 experiment 0.803132365153439 Functional Loss NA| ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470856 chr6:27470871 . . 0 36 hPsi_associated_SNPs_209 0 0 1 0 0 unknown 1 0.438718637413249 2.30073928839669e-05 1 hPsi_site_6938 iPseU_CNN:2.30073928839669e-05;iRNA_PseU:1 6939 chr6 27513498 27513498 1 + A C rs148637877 27513495 + 27513475 27513515 41 TGGCCGAGTGGTTAAGGCGATGGACTTGAAATCCATTGGGG TGGCCGAGTGGTTAAGGCGATGGCCTTGAAATCCATTGGGG < 41bp 1 0.287222692818455 1 0.718298316001892 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513495 chr6:27513498 . . 0 24 hPsi_associated_SNPs_211 0 0 1 0 0 unknown 1 0.438773126057618 0.563403367996216 1 hPsi_site_6939 iPseU_CNN:0.563403367996216;iRNA_PseU:1 6940 chr6 27513511 27513511 1 + T C rs373271921 27513495 + 27513475 27513515 41 TGGCCGAGTGGTTAAGGCGATGGACTTGAAATCCATTGGGG TGGCCGAGTGGTTAAGGCGATGGACTTGAAATCCATCGGGG < 41bp 1 0.555464841802478 1 0.999925017356873 experiment 0.889070316395044 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513495 chr6:27513511 . . 0 37 hPsi_associated_SNPs_212 0 0 1 0 0 unknown 1 0.438718816227831 0.000149965286253995 1 hPsi_site_6940 iPseU_CNN:0.000149965286253995;iRNA_PseU:1 6941 chr6 27513511 27513511 1 + T C rs373271921 27513506 + 27513486 27513526 41 TTAAGGCGATGGACTTGAAATCCATTGGGGTTTCCCCGCGC TTAAGGCGATGGACTTGAAATCCATCGGGGTTTCCCCGCGC < 41bp 1 0.645211642265969 1 0.967068314552307 experiment 0.709576715468061 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513506 chr6:27513511 . . 0 26 hPsi_associated_SNPs_213 0 0 1 0 0 unknown 1 0.440821998139029 0.065863370895386 1 hPsi_site_6941 iPseU_CNN:0.065863370895386;iRNA_PseU:1 6942 chr6 27513511 27513511 1 + T C rs373271921 27513531 + 27513511 27513551 41 TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGT CGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGT < 41bp 1 0.378919536460832 1 0.999917447566986 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513531 chr6:27513511 . . 0 1 hPsi_associated_SNPs_214 0 0 1 0 0 unknown 1 0.463156290017294 0.000165104866028054 1 hPsi_site_6942 iPseU_CNN:0.000165104866028054;iRNA_PseU:1 6943 chr6 27513542 27513542 1 + C G rs142077479 27513531 + 27513511 27513551 41 TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGT TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCGGACTACGGT < 41bp 1 0.381241014272938 1 0.999987781047821 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513531 chr6:27513542 . . 0 32 hPsi_associated_SNPs_215 0 0 1 0 0 unknown 1 0.439113358774884 2.44379043579102e-05 1 hPsi_site_6943 iPseU_CNN:2.44379043579102e-05;iRNA_PseU:1 6944 chr6 27513544 27513544 1 + A C rs146661525 27513531 + 27513511 27513551 41 TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGT TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGCCTACGGT < 41bp 1 0.289438135903633 1 0.99998414516449 experiment 1 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513531 chr6:27513544 . . 0 34 hPsi_associated_SNPs_216 0 0 1 0 0 unknown 1 0.455705743045081 3.17096710200637e-05 1 hPsi_site_6944 iPseU_CNN:3.17096710200637e-05;iRNA_PseU:1 6945 chr6 27513548 27513548 1 + C T rs139062670 27513531 + 27513511 27513551 41 TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGT TGGGGTTTCCCCGCGCAGGTTCGAATCCTGCCGACTATGGT < 41bp 1 0.63594503819909 1 0.999993979930878 experiment 0.728109923601819 Functional Loss NA| ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513531 chr6:27513548 . . 0 38 hPsi_associated_SNPs_217 0 0 1 0 0 unknown 1 0.532804364470513 1.20401382439628e-05 0.934391271058975 hPsi_site_6945 iPseU_CNN:1.20401382439628e-05;iRNA_PseU:0.934391271058975 not specified not specified 6946 chr6 28557149 28557149 1 + T C rs114416898 28557168 + 28557148 28557188 41 TTGTGGTTGGTCCCATGGTGTAATGGTTAGCACTCTGGACT TCGTGGTTGGTCCCATGGTGTAATGGTTAGCACTCTGGACT < 41bp 1 0.439178258988356 1 0.999223709106445 experiment 1 Functional Loss NA| ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557168 chr6:28557149 . . 0 2 hPsi_associated_SNPs_218 0 0 1 0 0 nucleolus 1 0.438718889239556 0.00155258178711004 1 hPsi_site_6946 iPseU_CNN:0.00155258178711004;iRNA_PseU:1 not specified not specified 6947 chr6 28557151 28557151 1 + T C rs397708 28557168 + 28557148 28557188 41 TTGTGGTTGGTCCCATGGTGTAATGGTTAGCACTCTGGACT TTGCGGTTGGTCCCATGGTGTAATGGTTAGCACTCTGGACT < 41bp 1 0.630618994091544 1 0.999608993530273 experiment 0.738762011816913 Functional Loss NA| ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557168 chr6:28557151 . . 0 4 hPsi_associated_SNPs_219 0 0 1 0 0 nucleolus 1 0.611220476427447 0.000782012939454013 0.777559047145105 hPsi_site_6947 iPseU_CNN:0.000782012939454013;iRNA_PseU:0.777559047145105 6948 chr6 28557228 28557228 1 + T A rs150137877 28557208 + 28557188 28557228 41 TTTGAATCCAGCAATCCGAGTTCGAATCTCGGTGGGACCTT TTTGAATCCAGCAATCCGAGTTCGAATCTCGGTGGGACCTA < 41bp 1 0.495659016591405 1 0.999829053878784 experiment 1 Functional Loss NA| ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557208 chr6:28557228 . . 0 41 hPsi_associated_SNPs_220 0 0 1 0 0 nucleolus 1 0.999987418778968 0.000341892242432085 2.51624420641861e-05 hPsi_site_6948 iPseU_CNN:0.000341892242432085;iRNA_PseU:2.51624420641861e-05 6949 chr6 28557228 28557228 1 + T A rs150137877 28557209 + 28557189 28557229 41 TTGAATCCAGCAATCCGAGTTCGAATCTCGGTGGGACCTTT TTGAATCCAGCAATCCGAGTTCGAATCTCGGTGGGACCTAT < 41bp 1 0.476888281149825 1 0.985566377639771 experiment 1 Functional Loss NA| ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557209 chr6:28557228 . . 0 40 hPsi_associated_SNPs_221 0 0 1 0 0 nucleolus 1 0.438966167438833 0.0288672447204581 1 hPsi_site_6949 iPseU_CNN:0.0288672447204581;iRNA_PseU:1 6950 chr6 28557229 28557229 1 + T C rs114908534 28557209 + 28557189 28557229 41 TTGAATCCAGCAATCCGAGTTCGAATCTCGGTGGGACCTTT TTGAATCCAGCAATCCGAGTTCGAATCTCGGTGGGACCTTC < 41bp 1 0.265254798575947 1 0.999802052974701 experiment 1 Functional Loss NA| ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557209 chr6:28557229 . . 0 41 hPsi_associated_SNPs_222 0 0 1 0 0 nucleolus 1 0.438851635556418 0.000395894050597922 1 hPsi_site_6950 iPseU_CNN:0.000395894050597922;iRNA_PseU:1 6951 chr6 28732203 28732203 1 + C A rs530718844 28732190 + 28732170 28732210 41 ATTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGT ATTGCTCAGTTGGGAGAGCGTTAGACTGAAGATATAAAGGT < 41bp 1 0.2821852436743 1 0.998659372329712 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28732190 chr6:28732203 . . 0 34 hPsi_associated_SNPs_223 0 0 1 0 0 unknown 1 0.43879384891777 0.00268125534057595 1 hPsi_site_6951 iPseU_CNN:0.00268125534057595;iRNA_PseU:1 6952 chr6 28732203 28732203 1 + C A rs530718844 28732191 + 28732171 28732211 41 TTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTC TTGCTCAGTTGGGAGAGCGTTAGACTGAAGATATAAAGGTC < 41bp 1 0.176442594567699 1 0.998777508735657 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28732191 chr6:28732203 . . 0 33 hPsi_associated_SNPs_224 0 0 1 0 0 unknown 1 0.438726871073439 0.00244498252868608 1 hPsi_site_6952 iPseU_CNN:0.00244498252868608;iRNA_PseU:1 6953 chr6 28732209 28732209 1 + G A rs116450899 28732190 + 28732170 28732210 41 ATTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGT ATTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGAT < 41bp 1 0.115045580178599 1 0.999822974205017 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28732190 chr6:28732209 . . 0 40 hPsi_associated_SNPs_225 0 0 1 0 0 unknown 1 0.977250342269881 0.000354051589966042 0.045499315460239 hPsi_site_6953 iPseU_CNN:0.000354051589966042;iRNA_PseU:0.045499315460239 6954 chr6 28732209 28732209 1 + G A rs116450899 28732191 + 28732171 28732211 41 TTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTC TTGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGATC < 41bp 1 0.207187605734937 1 0.999993324279785 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28732191 chr6:28732209 . . 0 39 hPsi_associated_SNPs_226 0 0 1 0 0 unknown 1 0.552452858079476 1.33514404299095e-05 0.895094283841047 hPsi_site_6954 iPseU_CNN:1.33514404299095e-05;iRNA_PseU:0.895094283841047 6955 chr6 28908903 28908903 1 + T C rs568260917 28908916 + 28908896 28908936 41 TCTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACA TCTCCAACGGAGGCGTGGGTTCGAATCCCACTTCTGACACA < 41bp 1 0.171401624605515 1 0.999997138977051 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908916 chr6:28908903 . . 0 8 hPsi_associated_SNPs_227 0 0 1 0 0 unknown 1 0.965179477016905 5.72204589799341e-06 0.0696410459661903 hPsi_site_6955 iPseU_CNN:5.72204589799341e-06;iRNA_PseU:0.0696410459661903 6956 chr6 28908904 28908904 1 + G A rs62407911 28908916 + 28908896 28908936 41 TCTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACA TCTCCAATAGAGGCGTGGGTTCGAATCCCACTTCTGACACA < 41bp 1 0.280430503630817 1 0.999998927116394 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908916 chr6:28908904 . . 0 9 hPsi_associated_SNPs_228 0 0 1 0 0 unknown 1 0.439763116314711 2.14576721191406e-06 1 hPsi_site_6956 iPseU_CNN:2.14576721191406e-06;iRNA_PseU:1 6957 chr6 28908909 28908909 1 + C G rs58800808 28908916 + 28908896 28908936 41 TCTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACA TCTCCAATGGAGGGGTGGGTTCGAATCCCACTTCTGACACA < 41bp 1 0.243439265819477 1 0.999999761581421 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908916 chr6:28908909 . . 0 14 hPsi_associated_SNPs_229 0 0 1 0 0 unknown 1 0.439193014559305 4.7683715798108e-07 1 hPsi_site_6957 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:1 6958 chr6 28908928 28908928 1 + T A rs376005893 28908916 + 28908896 28908936 41 TCTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACA TCTCCAATGGAGGCGTGGGTTCGAATCCCACTACTGACACA < 41bp 1 0.221393092940361 1 0.999996602535248 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908916 chr6:28908928 . . 0 33 hPsi_associated_SNPs_230 0 0 1 0 0 unknown 1 0.999994490772154 6.79492950395044e-06 1.10184556927351e-05 hPsi_site_6958 iPseU_CNN:6.79492950395044e-06;iRNA_PseU:1.10184556927351e-05 6959 chr6 28918844 28918844 1 + T C rs147350039 28918860 + 28918840 28918880 41 TTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGG TTAACCTGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGG < 41bp 1 0.279665817392927 1 0.999998211860657 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918860 chr6:28918844 . . 0 5 hPsi_associated_SNPs_231 0 0 1 0 0 unknown 1 0.439475590319291 3.57627868607935e-06 1 hPsi_site_6959 iPseU_CNN:3.57627868607935e-06;iRNA_PseU:1 6960 chr6 28918850 28918850 1 + G A rs534455894 28918860 + 28918840 28918880 41 TTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGG TTAATCTGAGAGTCCAGGGTTCAAGTCCCTGTTCGGGCGGG < 41bp 1 0.40573881166427 1 0.999994874000549 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918860 chr6:28918850 . . 0 11 hPsi_associated_SNPs_232 0 0 1 0 0 unknown 1 0.43894939292637 1.02519989020333e-05 1 hPsi_site_6960 iPseU_CNN:1.02519989020333e-05;iRNA_PseU:1 6961 chr6 28918854 28918854 1 + C A rs115194890 28918860 + 28918840 28918880 41 TTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGG TTAATCTGAGGGTCAAGGGTTCAAGTCCCTGTTCGGGCGGG < 41bp 1 0.377798859290414 1 0.999994456768036 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918860 chr6:28918854 . . 0 15 hPsi_associated_SNPs_233 0 0 1 0 0 unknown 1 0.442438790666124 1.10864639280006e-05 1 hPsi_site_6961 iPseU_CNN:1.10864639280006e-05;iRNA_PseU:1 6962 chr6 28950003 28950003 1 + G A rs555017830 28949988 + 28949968 28950008 41 CTTCAGCTTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT CTTCAGCTTCCCTGGTGGTCTAGTGGTTAGGATTCAGCGCT < 41bp 1 0.0995567396086108 1 0.999809145927429 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28949988 chr6:28950003 . . 0 36 hPsi_associated_SNPs_234 0 0 1 0 0 unknown 1 0.438718221268783 0.000381708145142046 1 hPsi_site_6962 iPseU_CNN:0.000381708145142046;iRNA_PseU:1 6963 chr6 28950003 28950003 1 + G A rs555017830 28949995 + 28949975 28950015 41 TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCG TTCCCTGGTGGTCTAGTGGTTAGGATTCAGCGCTCTCACCG < 41bp 1 0.611636881917719 1 0.99998950958252 experiment 0.776726236164562 Functional Loss NA| LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28949995 chr6:28950003 . . 0 29 hPsi_associated_SNPs_235 0 0 1 0 0 unknown 1 0.447294519246779 2.09808349600493e-05 1 hPsi_site_6963 iPseU_CNN:2.09808349600493e-05;iRNA_PseU:1 6964 chr6 28950013 28950013 1 + C A rs57071012 28949995 + 28949975 28950015 41 TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCG TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCAACG < 41bp 1 0.449680898135311 1 0.999958217144012 experiment 1 Functional Loss NA| LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28949995 chr6:28950013 . . 0 39 hPsi_associated_SNPs_236 0 0 1 0 0 unknown 1 0.443558254414813 8.35657119759858e-05 1 hPsi_site_6964 iPseU_CNN:8.35657119759858e-05;iRNA_PseU:1 6965 chr6 28950013 28950013 1 + C A rs57071012 28950029 + 28950009 28950049 41 CTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG CTCAACGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG < 41bp 1 0.525387520779611 1 1 experiment 0.949224958440779 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950029 chr6:28950013 . . 0 5 hPsi_associated_SNPs_237 0 0 1 0 0 unknown 1 0.442696978909642 0 1 hPsi_site_6965 iPseU_CNN:0;iRNA_PseU:1 6966 chr6 28950014 28950014 1 + C A rs546018964 28949995 + 28949975 28950015 41 TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCG TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACAG < 41bp 1 0.352005844776392 1 0.999632358551025 experiment 1 Functional Loss NA| LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28949995 chr6:28950014 . . 0 40 hPsi_associated_SNPs_238 0 0 1 0 0 unknown 1 0.472819373151519 0.000735282897950107 1 hPsi_site_6966 iPseU_CNN:0.000735282897950107;iRNA_PseU:1 6967 chr6 28950014 28950014 1 + C A rs546018964 28950029 + 28950009 28950049 41 CTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG CTCACAGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG < 41bp 1 0.228671766651263 1 1 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950029 chr6:28950014 . . 0 6 hPsi_associated_SNPs_239 0 0 1 0 0 unknown 1 0.438696008540842 0 1 hPsi_site_6967 iPseU_CNN:0;iRNA_PseU:1 6968 chr6 28950016 28950016 1 + C A rs192373984 28950029 + 28950009 28950049 41 CTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG CTCACCGACGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG < 41bp 1 0.428083734746807 1 1 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950029 chr6:28950016 . . 0 8 hPsi_associated_SNPs_240 0 0 1 0 0 unknown 1 0.441900640753252 0 1 hPsi_site_6968 iPseU_CNN:0;iRNA_PseU:1 6969 chr6 28950035 28950035 1 + C A rs184275668 28950029 + 28950009 28950049 41 CTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATG CTCACCGCCGCGGCCCGGGTTCGATTACCGGTCAGGGAATG < 41bp 1 0.322947936919625 1 0.999994874000549 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950029 chr6:28950035 . . 0 27 hPsi_associated_SNPs_241 0 0 1 0 0 unknown 1 0.438720058072516 1.02519989020333e-05 1 hPsi_site_6969 iPseU_CNN:1.02519989020333e-05;iRNA_PseU:1 Schwannomatosis Schwannomatosis 6970 chr6 29550040 29550040 1 + G A rs114767962 29550056 + 29550036 29550076 41 ATGAGCAACAATCACCATCTTTCGTTTGAGTCTCATGGCCA ATGAACAACAATCACCATCTTTCGTTTGAGTCTCATGGCCA < 41bp 1 0.52533024986698 1 0.999983370304108 experiment 0.949339500266041 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SNORD32B ENSG00000201330 ncRNA_exonic Human snoRNA chr6:29550056 chr6:29550040 . . 0 5 hPsi_associated_SNPs_242 0 0 0 0 0 unknown 1 0.764881734104583 3.32593917840018e-05 0.470236531790834 hPsi_site_6970 iPseU_CNN:3.32593917840018e-05;iRNA_PseU:0.470236531790834 6971 chr6 31590921 31590921 1 + T C rs11755228 31590938 + 31590918 31590958 41 AAATGTGGATTTGGGAAACTTTGAGGCCAGCTTGCTTCTTG AAACGTGGATTTGGGAAACTTTGAGGCCAGCTTGCTTCTTG < 41bp 1 0.251001833867439 1 0.999676585197449 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SNORA38 ENSG00000200816 ncRNA_exonic Human snoRNA chr6:31590938 chr6:31590921 . . 0 4 hPsi_associated_SNPs_243 0 0 1 3 0 unknown 1 0.953571985069779 0.000646829605102095 0.0928560298604424 hPsi_site_6971 iPseU_CNN:0.000646829605102095;iRNA_PseU:0.0928560298604424 6972 chr6 34213930 34213930 1 + A G rs576111157 34213936 + 34213916 34213956 41 GGGGAGGGGTAGCCATGATTTGTCCCAGCCTGGGGCTCCCT GGGGAGGGGTAGCCGTGATTTGTCCCAGCCTGGGGCTCCCT < 41bp 1 0.153148662508524 1 0.998575329780579 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HMGA1 ENSG00000137309 UTR3 Human protein_coding chr6:34213936 chr6:34213930 . . 0 15 hPsi_associated_SNPs_244 0 0 1 0 0 Cytosol 1 0.628259437295914 0.00284934043884211 0.743481125408171 hPsi_site_6972 iPseU_CNN:0.00284934043884211;iRNA_PseU:0.743481125408171 6973 chr6 36177597 36177597 1 + C T rs73730485 36177606 + 36177586 36177626 41 TGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGACA TGGAGCTGGAGTTGATGCCATTCAATGTTCTGTTGAGGACA < 41bp 1 0.251413291192166 1 0.805176377296448 experiment 1 Functional Loss NA| BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36177606 chr6:36177597 synonymous SNV . 0 12 hPsi_associated_SNPs_245 0 0 1 1 1 chromatin 1 0.919030810376861 0.389647245407104 0.161938379246278 hPsi_site_6973 iPseU_CNN:0.389647245407104;iRNA_PseU:0.161938379246278 6974 chr6 44198312 44198312 1 + G A rs8187640 44198331 + 44198311 44198351 41 CGGAGCTATCAGAAAGTGCCTTCGGCTACTTTATCACAGCC CAGAGCTATCAGAAAGTGCCTTCGGCTACTTTATCACAGCC < 41bp 1 0.178965457174015 1 0.998245596885681 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44198331 chr6:44198312 synonymous SNV . 0 2 hPsi_associated_SNPs_246 0 0 1 0 2 Endoplasmic reticulum 1 0.450898225326817 0.00350880622863792 1 hPsi_site_6974 iPseU_CNN:0.00350880622863792;iRNA_PseU:1 6975 chr6 44200655 44200655 1 + G A rs45458701 44200637 + 44200617 44200657 41 GCAACATTAAGCCCCGCCGCTACCTGACTGTGGTCTTCGAG GCAACATTAAGCCCCGCCGCTACCTGACTGTGGTCTTCAAG < 41bp 1 0.491165227376532 1 0.978167772293091 experiment 1 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44200637 chr6:44200655 nonsynonymous SNV 0.937 0 39 hPsi_associated_SNPs_247 0 0 1 0 1 Endoplasmic reticulum 1 0.440722612600979 0.0436644554138179 1 hPsi_site_6975 iPseU_CNN:0.0436644554138179;iRNA_PseU:1 6976 chr6 52318952 52318952 1 + C T rs567484420 52318960 + 52318940 52318980 41 TGAATGTCGGACCTACATCATTCATTACTATCTTATGGATG TGAATGTCGGACTTACATCATTCATTACTATCTTATGGATG < 41bp 1 0.624550055021968 1 0.980596542358398 experiment 0.750899889956065 Functional Loss NA| EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52318960 chr6:52318952 synonymous SNV . 0 13 hPsi_associated_SNPs_249 0 0 1 0 1 Cytosol 1 0.468398312978267 0.038806915283204 1 hPsi_site_6976 iPseU_CNN:0.038806915283204;iRNA_PseU:1 6977 chr6 52442988 52442988 1 + G A rs147511949 52442993 + 52442973 52443013 41 AAAATACAGTCTTGGGTCTGTAATTCCCTTATCTGACTCTC AAAATACAGTCTTGGATCTGTAATTCCCTTATCTGACTCTC < 41bp 1 0.271101059344439 1 0.996369004249573 experiment 1 Functional Loss NA| TRAM2-AS1 ENSG00000225791 ncRNA_exonic Human lincRNA chr6:52442993 chr6:52442988 . . 0 16 hPsi_associated_SNPs_250 0 0 1 1 0 unknown 1 0.439628796476201 0.00726199150085405 1 hPsi_site_6977 iPseU_CNN:0.00726199150085405;iRNA_PseU:1 6978 chr6 52443012 52443012 1 + T A rs372446748 52442993 + 52442973 52443013 41 AAAATACAGTCTTGGGTCTGTAATTCCCTTATCTGACTCTC AAAATACAGTCTTGGGTCTGTAATTCCCTTATCTGACTCAC < 41bp 1 0.640323705382926 1 0.999974012374878 experiment 0.719352589234149 Functional Loss NA| TRAM2-AS1 ENSG00000225791 ncRNA_exonic Human lincRNA chr6:52442993 chr6:52443012 . . 0 40 hPsi_associated_SNPs_251 0 0 0 1 0 unknown 1 0.928502815076859 5.19752502439186e-05 0.142994369846282 hPsi_site_6978 iPseU_CNN:5.19752502439186e-05;iRNA_PseU:0.142994369846282 6979 chr6 118029086 118029086 1 + T C rs556793525 118029082 + 118029062 118029102 41 AAGAAAGTTTTATTTCCTTTTTTGTTTGATGGGCAGTATGC AAGAAAGTTTTATTTCCTTTTTTGCTTGATGGGCAGTATGC < 41bp 1 0.291375381334746 1 0.957776606082916 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUS1 ENSG00000153989 UTR3 Human protein_coding chr6:118029082 chr6:118029086 . . 0 25 hPsi_associated_SNPs_252 0 0 1 0 0 Endoplasmic reticulum 1 0.52352947373675 0.0844467878341679 0.9529410525265 hPsi_site_6979 iPseU_CNN:0.0844467878341679;iRNA_PseU:0.9529410525265 6980 chr6 144151421 144151421 1 + T C rs558370226 144151416 + 144151396 144151436 41 ATTAAAAATTCAAACAAGTTTCTTTTTTTTTTTTTTTTTTC ATTAAAAATTCAAACAAGTTTCTTTCTTTTTTTTTTTTTTC < 41bp 1 0.313584055242734 1 0.98253607749939 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PHACTR2 ENSG00000112419 UTR3 Human protein_coding chr6:144151416 chr6:144151421 . . 0 26 hPsi_associated_SNPs_253 0 0 1 0 0 Cytosol 1 0.774205750186014 0.03492784500122 0.451588499627972 hPsi_site_6980 iPseU_CNN:0.03492784500122;iRNA_PseU:0.451588499627972 6981 chr6 163991474 163991474 1 + C T rs56098044 163991477 + 163991457 163991497 41 TATTTTTTCTTGTTAACCAGTTTTTTTTTTTTTTTTGTGGG TATTTTTTCTTGTTAACTAGTTTTTTTTTTTTTTTTGTGGG < 41bp 1 0.32462764916444 1 0.0926441252231598 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QKI ENSG00000112531 intronic Human protein_coding chr6:163991477 chr6:163991474 . . 0 18 hPsi_associated_SNPs_254 0 0 1 0 0 Ribosome 1 0.436323252321452 1 1 hPsi_site_6981 iPseU_CNN:1;iRNA_PseU:1 6982 chr6 163991482 163991482 1 + T G rs537560676 163991477 + 163991457 163991497 41 TATTTTTTCTTGTTAACCAGTTTTTTTTTTTTTTTTGTGGG TATTTTTTCTTGTTAACCAGTTTTTGTTTTTTTTTTGTGGG < 41bp 1 0.134782239459049 1 0.0202952921390533 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QKI ENSG00000112531 intronic Human protein_coding chr6:163991477 chr6:163991482 . . 0 26 hPsi_associated_SNPs_255 0 0 1 0 0 Ribosome 1 0.438720826711177 1 1 hPsi_site_6982 iPseU_CNN:1;iRNA_PseU:1 6983 chr7 819695 819695 1 + A G rs61755909 819697 + 819677 819717 41 GTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTAC GTGCCAACGCAAAATCCTGCTATCAGAGCAGTGTCCAGTAC < 41bp 1 0.566718792356065 1 0.998085975646973 experiment 0.866562415287871 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819697 chr7:819695 nonsynonymous SNV 0.027 0 19 hPsi_associated_SNPs_256 1 0 1 0 1 Ribosome 1 0.944437547933453 0.00382804870605402 0.111124904133093 hPsi_site_6983 iPseU_CNN:0.00382804870605402;iRNA_PseU:0.111124904133093 6984 chr7 819711 819711 1 + C T rs140641290 819697 + 819677 819717 41 GTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTAC GTGCCAACGCAAAATCCTACTATCAGAGCAGTGTTCAGTAC < 41bp 1 0.394107909333681 1 0.996044278144836 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819697 chr7:819711 synonymous SNV . 0 35 hPsi_associated_SNPs_257 0 0 1 0 1 Ribosome 1 0.438164190634737 0.00791144371032804 1 hPsi_site_6984 iPseU_CNN:0.00791144371032804;iRNA_PseU:1 6985 chr7 2703257 2703257 1 + T C rs115386344 2703268 + 2703248 2703288 41 CCAGGGGAGTTCTCCAGGCCTAGGGCCAGGAGAGAGGCCCT CCAGGGGAGCTCTCCAGGCCTAGGGCCAGGAGAGAGGCCCT < 41bp 1 0.383764007968818 1 0.993043065071106 experiment 1 Functional Loss NA| TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2703268 chr7:2703257 . . 0 10 hPsi_associated_SNPs_258 0 0 1 0 0 Ribosome 1 0.471190278306034 0.0139138698577881 1 hPsi_site_6985 iPseU_CNN:0.0139138698577881;iRNA_PseU:1 6986 chr7 2703533 2703533 1 + C T rs531424855 2703523 + 2703503 2703543 41 CGGGGAAAATCAAAAGGGGTTCAAACCCCACCTCAGTAGGT CGGGGAAAATCAAAAGGGGTTCAAACCCCATCTCAGTAGGT < 41bp 1 0.482761512547987 1 0.999929666519165 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2703523 chr7:2703533 . . 0 31 hPsi_associated_SNPs_259 0 0 1 0 0 Ribosome 1 0.950907138714791 0.000140666961669922 0.0981857225704172 hPsi_site_6986 iPseU_CNN:0.000140666961669922;iRNA_PseU:0.0981857225704172 6987 chr7 5959497 5959497 1 + T A rs145821480 5959503 + 5959483 5959523 41 CTGTCCACCCAACGTTGGATTTTTGCCGAAGACTGGACAGC CTGTCCACCCAACGATGGATTTTTGCCGAAGACTGGACAGC < 41bp 1 0.633952928530637 1 0.999668121337891 experiment 0.732094142938726 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CCZ1 ENSG00000122674 CDS Human protein_coding chr7:5959503 chr7:5959497 nonsynonymous SNV 0.047 0 15 hPsi_associated_SNPs_260 0 0 0 0 1 Ribosome 1 0.438719332129297 0.000663757324218084 1 hPsi_site_6987 iPseU_CNN:0.000663757324218084;iRNA_PseU:1 6988 chr7 27827191 27827191 1 + A G rs143687148 27827199 + 27827179 27827219 41 AGGAAAATCTGCAAAGAACTTTCCTGCTTACAACCTCAAGT AGGAAAATCTGCGAAGAACTTTCCTGCTTACAACCTCAAGT < 41bp 1 0.43337945662518 1 0.973514914512634 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27827199 chr7:27827191 nonsynonymous SNV 0.993 0 13 hPsi_associated_SNPs_261 0 0 1 0 1 Ribosome 1 0.438715216110937 0.0529701709747319 1 hPsi_site_6988 iPseU_CNN:0.0529701709747319;iRNA_PseU:1 6989 chr7 44100576 44100576 1 + A T rs143489804 44100593 + 44100573 44100613 41 AGGAGGCCTGGGAGTTGACATTCAGCACTCTTCCAGGAATA AGGTGGCCTGGGAGTTGACATTCAGCACTCTTCCAGGAATA < 41bp 1 0.687264478042398 1 0.999932527542114 experiment 0.625471043915205 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DBNL ENSG00000136279 UTR3 Human protein_coding chr7:44100593 chr7:44100576 . . 0 4 hPsi_associated_SNPs_262 0 0 1 0 0 Ribosome 1 0.88748033293537 0.000134944915771928 0.22503933412926 hPsi_site_6989 iPseU_CNN:0.000134944915771928;iRNA_PseU:0.22503933412926 6990 chr7 64389023 64389023 1 + T C rs190100253 64389030 + 64389010 64389050 41 GTGGAAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGGAAAAGCCTTCAGTGTATTCTCAACCCTTACTAAACAT < 41bp 1 0.482685524946575 1 0.999973773956299 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64389030 chr7:64389023 synonymous SNV . 0 14 hPsi_associated_SNPs_263 0 0 1 0 0 Cytosol 1 0.438718559977375 5.24520874018997e-05 1 hPsi_site_6990 iPseU_CNN:5.24520874018997e-05;iRNA_PseU:1 6991 chr7 64389032 64389032 1 + C A rs138681847 64389030 + 64389010 64389050 41 GTGGAAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGGAAAAGCCTTTAGTGTATTATCAACCCTTACTAAACAT < 41bp 1 0.348813466626088 1 0.992237091064453 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64389030 chr7:64389032 nonsynonymous SNV 0.001 0 23 hPsi_associated_SNPs_264 0 0 0 0 0 Cytosol 1 0.43870530061244 0.015525817871094 1 hPsi_site_6991 iPseU_CNN:0.015525817871094;iRNA_PseU:1 6992 chr7 64389036 64389036 1 + A G rs147391977 64389030 + 64389010 64389050 41 GTGGAAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGGAAAAGCCTTTAGTGTATTCTCAGCCCTTACTAAACAT < 41bp 1 0.652160648203554 1 0.995547771453857 experiment 0.695678703592893 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64389030 chr7:64389036 nonsynonymous SNV 0.001 0 27 hPsi_associated_SNPs_265 0 0 0 0 0 Cytosol 1 0.47778832793146 0.00890445709228604 1 hPsi_site_6992 iPseU_CNN:0.00890445709228604;iRNA_PseU:1 6993 chr7 64864426 64864426 1 + A G rs143444213 64864420 + 64864400 64864440 41 GTGGCAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGGCAAAGCCTTTAGTGTATTCTCAGCCCTTACTAAACAT < 41bp 1 0.452965370527861 1 0.996357798576355 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64864420 chr7:64864426 nonsynonymous SNV 0.949 0 27 hPsi_associated_SNPs_266 0 0 1 0 0 Cytosol 1 0.507903814126635 0.00728440284729004 0.984192371746729 hPsi_site_6993 iPseU_CNN:0.00728440284729004;iRNA_PseU:0.984192371746729 6994 chr7 72300332 72300332 1 + G A rs2240537 72300328 + 72300308 72300348 41 AGCGCTTCGAAATCGCCTGCTACAGAAACAAGGTCGTCGGC AGCGCTTCGAAATCGCCTGCTACAAAAACAAGGTCGTCGGC < 41bp 1 0.432817129849087 1 0.999922573566437 experiment 1 Functional Loss NA| SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72300328 chr7:72300332 . . 0 25 hPsi_associated_SNPs_267 0 0 1 0 1 unknown 1 0.459685041641424 0.000154852867126021 1 hPsi_site_6994 iPseU_CNN:0.000154852867126021;iRNA_PseU:1 6995 chr7 75518089 75518089 1 + C T rs199683729 75518105 + 75518085 75518125 41 TTGGCGGTCCCAGGCCTGTGTAGTGTCTCTCCCCTGCTGCG TTGGTGGTCCCAGGCCTGTGTAGTGTCTCTCCCCTGCTGCG < 41bp 1 0.591927587966165 1 0.986362934112549 experiment 0.81614482406767 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control RHBDD2 ENSG00000005486 UTR3 Human protein_coding chr7:75518105 chr7:75518089 . . 0 5 hPsi_associated_SNPs_268 0 0 1 0 0 Endoplasmic reticulum 1 0.46844312412233 0.0272741317749019 1 hPsi_site_6995 iPseU_CNN:0.0272741317749019;iRNA_PseU:1 6996 chr7 75933501 75933501 1 + C T rs1058872 75933488 + 75933468 75933508 41 CCGATGAGACTGCCGCCAAGTAAAGCCTTAGCCCGGATGCC CCGATGAGACTGCCGCCAAGTAAAGCCTTAGCCTGGATGCC < 41bp 1 0.622028849318307 1 0.999998331069946 experiment 0.755942301363386 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HSPB1 ENSG00000106211 UTR3 Human protein_coding chr7:75933488 chr7:75933501 . . 0 34 hPsi_associated_SNPs_269 3 0 1 1 0 Cytosol 1 0.439322019525223 3.33786010808801e-06 1 hPsi_site_6996 iPseU_CNN:3.33786010808801e-06;iRNA_PseU:1 6997 chr7 98942028 98942028 1 + A G rs377098965 98942047 + 98942027 98942067 41 GAATTAATCGCGCAGCTACTTTTGTGAAGTGGTCCCCCCTA GGATTAATCGCGCAGCTACTTTTGTGAAGTGGTCCCCCCTA < 41bp 1 0.409764160961655 1 0.999190211296082 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98942047 chr7:98942028 synonymous SNV . 0 2 hPsi_associated_SNPs_270 0 0 1 2 0 Cytosol 1 0.445221945267546 0.00161957740783603 1 hPsi_site_6997 iPseU_CNN:0.00161957740783603;iRNA_PseU:1 6998 chr7 98942064 98942064 1 + C G rs536180933 98942047 + 98942027 98942067 41 GAATTAATCGCGCAGCTACTTTTGTGAAGTGGTCCCCCCTA GAATTAATCGCGCAGCTACTTTTGTGAAGTGGTCCCCGCTA < 41bp 1 0.479135998733293 1 0.995244860649109 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98942047 chr7:98942064 synonymous SNV . 0 38 hPsi_associated_SNPs_271 0 0 1 1 1 Cytosol 1 0.438718502012955 0.009510278701782 1 hPsi_site_6998 iPseU_CNN:0.009510278701782;iRNA_PseU:1 6999 chr7 99067355 99067355 1 + C G rs540278510 99067360 + 99067340 99067380 41 CAGATCAGAAGGTTGCGTGTTCAAATCACGTCGGGGTCAAA CAGATCAGAAGGTTGGGTGTTCAAATCACGTCGGGGTCAAA < 41bp 1 0.664296168009774 1 0.999998927116394 experiment 0.671407663980452 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5J2-PTCD1;ZNF789 ENSG00000241468;ENSG00000198556 intergenic Human other chr7:99067360 chr7:99067355 . . 0 16 hPsi_associated_SNPs_272 0 0 1 0 0 unknown 1 0.438795282621882 2.14576721191406e-06 1 hPsi_site_6999 iPseU_CNN:2.14576721191406e-06;iRNA_PseU:1 7000 chr7 99067371 99067371 1 + C T rs114113339 99067360 + 99067340 99067380 41 CAGATCAGAAGGTTGCGTGTTCAAATCACGTCGGGGTCAAA CAGATCAGAAGGTTGCGTGTTCAAATCACGTTGGGGTCAAA < 41bp 1 0.66052285193338 1 0.999996662139893 experiment 0.678954296133239 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5J2-PTCD1;ZNF789 ENSG00000241468;ENSG00000198556 intergenic Human other chr7:99067360 chr7:99067371 . . 0 32 hPsi_associated_SNPs_273 0 0 1 0 0 unknown 1 0.438524618692473 6.67572021395557e-06 1 hPsi_site_7000 iPseU_CNN:6.67572021395557e-06;iRNA_PseU:1 7001 chr7 100466396 100466396 1 + A C rs200347062 100466392 + 100466372 100466412 41 GAAGTCTGGGGGCCTGGCTATAGGAGCCAGAGAGAGCCAGG GAAGTCTGGGGGCCTGGCTATAGGCGCCAGAGAGAGCCAGG < 41bp 1 0.616548390360094 1 0.99795663356781 experiment 0.766903219279812 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466392 chr7:100466396 nonsynonymous SNV 0.951 0 25 hPsi_associated_SNPs_274 0 0 1 1 2 Ribosome 1 0.438996860138088 0.0040867328643801 1 hPsi_site_7001 iPseU_CNN:0.0040867328643801;iRNA_PseU:1 7002 chr8 19677915 19677915 1 + G A rs7822495 19677912 + 19677892 19677932 41 TTATTTGAAACTCTTCCTGGTCGGGTCCAGTGTGAAATGTT TTATTTGAAACTCTTCCTGGTCGAGTCCAGTGTGAAATGTT < 41bp 1 0.528551892276949 1 0.975193858146667 experiment 0.942896215446101 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677912 chr8:19677915 synonymous SNV . 0 24 hPsi_associated_SNPs_278 0 0 1 0 1 Cytosol 1 0.43871857069699 0.0496122837066659 1 hPsi_site_7002 iPseU_CNN:0.0496122837066659;iRNA_PseU:1 7003 chr8 19709344 19709344 1 + C T rs186558993 19709360 + 19709340 19709380 41 AGCTCGGGCCTGTGTAATTGTAGGAGAAGACACTCAGCAGT AGCTTGGGCCTGTGTAATTGTAGGAGAAGACACTCAGCAGT < 41bp 1 0.503036853837333 1 0.997888803482056 experiment 0.993926292325335 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control INTS10 ENSG00000104613 UTR3 Human protein_coding chr8:19709360 chr8:19709344 . . 0 5 hPsi_associated_SNPs_279 0 0 1 0 0 Cytosol 1 0.482461470857021 0.00422239303588801 1 hPsi_site_7003 iPseU_CNN:0.00422239303588801;iRNA_PseU:1 7004 chr8 22432935 22432935 1 + G A rs191722898 22432942 + 22432922 22432962 41 CTGTGTGCTGCCCGCCTGCCTGCTGGCTCTCCCCCAGCCCC CTGTGTGCTGCCCACCTGCCTGCTGGCTCTCCCCCAGCCCC < 41bp 1 0.583521690534038 1 0.971442937850952 experiment 0.832956618931924 Functional Loss NA| SORBS3 ENSG00000120896 UTR3 Human protein_coding chr8:22432942 chr8:22432935 . . 0 14 hPsi_associated_SNPs_280 0 0 1 0 0 Cytosol 1 0.438841648185739 0.0571141242980959 1 hPsi_site_7004 iPseU_CNN:0.0571141242980959;iRNA_PseU:1 7005 chr8 41368286 41368286 1 + T G rs11337 41368293 + 41368273 41368313 41 TTTCACTGTCAGATATATTGTAGGTGCTAATACTGGATTTC TTTCACTGTCAGAGATATTGTAGGTGCTAATACTGGATTTC < 41bp 1 0.491322414348004 1 0.998086214065552 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GOLGA7 ENSG00000147533 UTR3 Human protein_coding chr8:41368293 chr8:41368286 . . 0 14 hPsi_associated_SNPs_282 0 0 1 3 0 Ribosome 1 0.438964376108635 0.00382757186889604 1 hPsi_site_7005 iPseU_CNN:0.00382757186889604;iRNA_PseU:1 7006 chr8 41368290 41368290 1 + T C rs115198548 41368293 + 41368273 41368313 41 TTTCACTGTCAGATATATTGTAGGTGCTAATACTGGATTTC TTTCACTGTCAGATATACTGTAGGTGCTAATACTGGATTTC < 41bp 1 0.691344707335888 1 0.999929785728455 experiment 0.617310585328223 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GOLGA7 ENSG00000147533 UTR3 Human protein_coding chr8:41368293 chr8:41368290 . . 0 18 hPsi_associated_SNPs_283 0 0 1 3 0 Ribosome 1 0.915755458756471 0.000140428543089932 0.168489082487058 hPsi_site_7006 iPseU_CNN:0.000140428543089932;iRNA_PseU:0.168489082487058 7007 chr8 57829729 57829729 1 + C T rs183513606 57829728 + 57829708 57829748 41 TGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTT TGCAAGGATGACACGCAAATTTGTGAAGCGTTCCATATTTT < 41bp 1 0.493738169580003 1 0.999854445457458 experiment 1 Functional Loss NA| LINC00968;IMPAD1 ENSG00000206975 ncRNA_exonic Human snRNA chr8:57829728 chr8:57829729 . . 0 22 hPsi_associated_SNPs_284 0 0 1 0 0 unknown 1 0.437140431525943 0.000291109085083896 1 hPsi_site_7007 iPseU_CNN:0.000291109085083896;iRNA_PseU:1 7008 chr8 57829730 57829730 1 + G A rs189117114 57829728 + 57829708 57829748 41 TGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTT TGCAAGGATGACACGCAAATTCATGAAGCGTTCCATATTTT < 41bp 1 0.326875908148186 1 0.990311622619629 experiment 1 Functional Loss NA| LINC00968;IMPAD1 ENSG00000206975 ncRNA_exonic Human snRNA chr8:57829728 chr8:57829730 . . 0 23 hPsi_associated_SNPs_285 0 0 1 0 0 unknown 1 0.437042595257735 0.019376754760742 1 hPsi_site_7008 iPseU_CNN:0.019376754760742;iRNA_PseU:1 7009 chr8 57829735 57829735 1 + G A rs74919057 57829728 + 57829708 57829748 41 TGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTT TGCAAGGATGACACGCAAATTCGTGAAACGTTCCATATTTT < 41bp 1 0.233943224795197 1 0.958210945129395 experiment 1 Functional Loss NA| LINC00968;IMPAD1 ENSG00000206975 ncRNA_exonic Human snRNA chr8:57829728 chr8:57829735 . . 0 28 hPsi_associated_SNPs_286 0 0 1 0 0 unknown 1 0.701490966627839 0.08357810974121 0.597018066744322 hPsi_site_7009 iPseU_CNN:0.08357810974121;iRNA_PseU:0.597018066744322 7010 chr8 57829736 57829736 1 + C A rs140731038 57829728 + 57829708 57829748 41 TGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTT TGCAAGGATGACACGCAAATTCGTGAAGAGTTCCATATTTT < 41bp 1 0.367361924875652 1 0.994012117385864 experiment 1 Functional Loss NA| LINC00968;IMPAD1 ENSG00000206975 ncRNA_exonic Human snRNA chr8:57829728 chr8:57829736 . . 0 29 hPsi_associated_SNPs_287 0 0 1 0 0 unknown 1 0.461023555760428 0.0119757652282719 1 hPsi_site_7010 iPseU_CNN:0.0119757652282719;iRNA_PseU:1 7011 chr8 67026471 67026471 1 + A G rs533884455 67026461 + 67026441 67026481 41 GGTAGAGCGCTCGCTTAGCATGCGAGAGGTAGCGGGATCGA GGTAGAGCGCTCGCTTAGCATGCGAGAGGTGGCGGGATCGA < 41bp 1 0.474090285800681 1 0.995805740356445 experiment 1 Functional Loss NA| DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026461 chr8:67026471 . . 0 31 hPsi_associated_SNPs_288 0 0 1 0 0 unknown 1 0.520548405102024 0.00838851928711004 0.958903189795951 hPsi_site_7011 iPseU_CNN:0.00838851928711004;iRNA_PseU:0.958903189795951 7012 chr8 73959008 73959008 1 + C T rs187138395 73959010 + 73958990 73959030 41 AAGTGCTGAGATTACAGACGTGAGCCACTGCGTCCTGCCTA AAGTGCTGAGATTACAGATGTGAGCCACTGCGTCCTGCCTA < 41bp 1 0.179605486794744 1 0.547351241111755 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TERF1 ENSG00000147601 UTR3 Human protein_coding chr8:73959010 chr8:73959008 . . 0 19 hPsi_associated_SNPs_291 0 0 1 0 0 Nucleus 1 0.445245497933182 0.90529751777649 1 hPsi_site_7012 iPseU_CNN:0.90529751777649;iRNA_PseU:1 7013 chr8 74891371 74891371 1 + C T rs186848163 74891365 + 74891345 74891385 41 CATACTCTTCGCCTCCCATGTTCAAGCGATTCTCCTGGCTC CATACTCTTCGCCTCCCATGTTCAAGTGATTCTCCTGGCTC < 41bp 1 0.444729127403723 1 0.993173718452454 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM70 ENSG00000175606 UTR3 Human protein_coding chr8:74891365 chr8:74891371 . . 0 27 hPsi_associated_SNPs_292 0 0 0 0 2 Ribosome 1 0.562469143098005 0.0136525630950921 0.875061713803989 hPsi_site_7013 iPseU_CNN:0.0136525630950921;iRNA_PseU:0.875061713803989 7014 chr8 95802780 95802780 1 + G T rs556723301 95802797 + 95802777 95802817 41 CATGATGTTACTGCATTTTCTAAATGACTAGTAAGTGATTA CATTATGTTACTGCATTTTCTAAATGACTAGTAAGTGATTA < 41bp 1 0.563088997336701 1 0.992965161800385 experiment 0.873822005326598 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide DPY19L4 ENSG00000156162 UTR3 Human protein_coding chr8:95802797 chr8:95802780 . . 0 4 hPsi_associated_SNPs_294 0 0 1 0 0 Endoplasmic reticulum 1 0.648966714662243 0.0140696763992301 0.702066570675514 hPsi_site_7014 iPseU_CNN:0.0140696763992301;iRNA_PseU:0.702066570675514 7015 chr8 145150101 145150101 1 + T A rs11541475 145150083 + 145150063 145150103 41 CCGGGCGCGCGTGCCCGGGGTCTGCTGTGCAGCGCGCGTCC CCGGGCGCGCGTGCCCGGGGTCTGCTGTGCAGCGCGCGACC < 41bp 1 0.697625655357962 1 0.924099445343018 experiment 0.604748689284076 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150083 chr8:145150101 synonymous SNV . 0 39 hPsi_associated_SNPs_299 0 0 1 0 1 Ribosome 1 0.885343941086708 0.151801109313964 0.229312117826585 hPsi_site_7015 iPseU_CNN:0.151801109313964;iRNA_PseU:0.229312117826585 7016 chr9 4586808 4586808 1 + G C rs3087879 4586827 + 4586807 4586847 41 AGTGGTTCGGGGGAAATAGTTCCATTCTATGACTCTTGTCT ACTGGTTCGGGGGAAATAGTTCCATTCTATGACTCTTGTCT < 41bp 1 0.623040651873079 1 0.999996066093445 experiment 0.753918696253842 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC1A1 ENSG00000106688 UTR3 Human protein_coding chr9:4586827 chr9:4586808 . . 0 2 hPsi_associated_SNPs_300 1 0 1 0 0 chromatin 1 0.438911732582062 7.86781310990747e-06 1 hPsi_site_7016 iPseU_CNN:7.86781310990747e-06;iRNA_PseU:1 7017 chr9 102733298 102733298 1 + T C rs1055187 102733288 + 102733268 102733308 41 ACATAGGCAAGTTACAGTCCTTTTAAAAAGTATCTCATTTC ACATAGGCAAGTTACAGTCCTTTTAAAAAGCATCTCATTTC < 41bp 1 0.547048849228436 1 0.992348194122314 experiment 0.905902301543129 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock STX17 ENSG00000136874 downstream Human protein_coding chr9:102733288 chr9:102733298 . . 0 31 hPsi_associated_SNPs_301 0 0 1 0 0 Cytosol 1 0.496571594912828 0.015303611755372 1 hPsi_site_7017 iPseU_CNN:0.015303611755372;iRNA_PseU:1 7018 chr9 108399467 108399467 1 + G A rs146568020 108399473 + 108399453 108399493 41 GACCATTTGCTTGTGCTCAGTATTTAGAAATGCATACACTC GACCATTTGCTTGTACTCAGTATTTAGAAATGCATACACTC < 41bp 1 0.642864780478149 1 0.988745212554932 experiment 0.714270439043702 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKTN ENSG00000106692 UTR3 Human protein_coding chr9:108399473 chr9:108399467 . . 0 15 hPsi_associated_SNPs_302 0 0 1 0 0 Ribosome 1 0.630064714689339 0.0225095748901361 0.739870570621323 hPsi_site_7018 iPseU_CNN:0.0225095748901361;iRNA_PseU:0.739870570621323 7019 chr9 125866411 125866411 1 + T A rs144308284 125866425 + 125866405 125866445 41 TTGGGCTCTGCTCTCCTCCCTGCCATTACGGGAGCTGTGGA TTGGGCACTGCTCTCCTCCCTGCCATTACGGGAGCTGTGGA < 41bp 1 0.284407867177604 1 0.999902009963989 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RABGAP1 ENSG00000011454 UTR3 Human protein_coding chr9:125866425 chr9:125866411 . . 0 7 hPsi_associated_SNPs_303 0 0 1 0 0 Nucleus 1 0.826145277428107 0.000195980072021928 0.347709445143785 hPsi_site_7019 iPseU_CNN:0.000195980072021928;iRNA_PseU:0.347709445143785 7020 chr9 132897672 132897672 1 + C A rs554647377 132897687 + 132897667 132897707 41 GAATTCATTTTTAATTTAGGTTTCTTTTTTTCTTCTTCATT GAATTAATTTTTAATTTAGGTTTCTTTTTTTCTTCTTCATT < 41bp 1 0.659785602527162 1 0.841414570808411 experiment 0.680428794945675 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132897687 chr9:132897672 . . 0 6 hPsi_associated_SNPs_304 0 0 1 0 0 Ribosome 1 0.43771110859044 0.317170858383178 1 hPsi_site_7020 iPseU_CNN:0.317170858383178;iRNA_PseU:1 7021 chr9 132901423 132901423 1 + C T rs115945271 132901432 + 132901412 132901452 41 AGTCCAGGATGCCTGTGGCCTGCGGCTTGATTCTTCCCTTT AGTCCAGGATGTCTGTGGCCTGCGGCTTGATTCTTCCCTTT < 41bp 1 0.306317368288861 1 0.99551260471344 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132901432 chr9:132901423 . . 0 12 hPsi_associated_SNPs_305 0 0 1 0 0 Ribosome 1 0.581490437632561 0.0089747905731199 0.837019124734878 hPsi_site_7021 iPseU_CNN:0.0089747905731199;iRNA_PseU:0.837019124734878 7022 chr9 137001224 137001224 1 + G C rs531170907 137001240 + 137001220 137001260 41 GCCCGCCCGAGCTGCCGCCTTGTCGAGCTGAGTCCGCGCTC GCCCCCCCGAGCTGCCGCCTTGTCGAGCTGAGTCCGCGCTC < 41bp 1 0.382017727512136 1 0.977263808250427 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDR5 ENSG00000196363 UTR5 Human protein_coding chr9:137001240 chr9:137001224 . . 0 5 hPsi_associated_SNPs_306 0 0 0 0 1 Cytosol 1 0.43871829850948 0.045472383499146 1 hPsi_site_7022 iPseU_CNN:0.045472383499146;iRNA_PseU:1 7023 chr9 137001251 137001251 1 + G A rs549392272 137001240 + 137001220 137001260 41 GCCCGCCCGAGCTGCCGCCTTGTCGAGCTGAGTCCGCGCTC GCCCGCCCGAGCTGCCGCCTTGTCGAGCTGAATCCGCGCTC < 41bp 1 0.366572560995626 1 0.991275668144226 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDR5 ENSG00000196363 UTR5 Human protein_coding chr9:137001240 chr9:137001251 . . 0 32 hPsi_associated_SNPs_307 0 0 1 0 1 Cytosol 1 0.933149369515401 0.0174486637115481 0.133701260969198 hPsi_site_7023 iPseU_CNN:0.0174486637115481;iRNA_PseU:0.133701260969198 7024 chr9 139317903 139317903 1 + C T rs141370805 139317900 + 139317880 139317920 41 GTGCCGATCAGTGGAGTCAGTATCGAGCCTGACCACCGCAA GTGCCGATCAGTGGAGTCAGTATTGAGCCTGACCACCGCAA < 41bp 1 0.627371978510207 1 0.298747718334198 experiment 0.745256042979586 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PMPCA ENSG00000165688 UTR3 Human protein_coding chr9:139317900 chr9:139317903 . . 0 24 hPsi_associated_SNPs_308 0 0 1 0 0 Cytosol 1 0.461676205070091 1 1 hPsi_site_7024 iPseU_CNN:1;iRNA_PseU:1 7025 chr10 57359699 57359699 1 + A G rs116249728 57359688 + 57359668 57359708 41 ACCAGGGTTTAGCTGTCTCTTACTTTCAACCAGTGAAATTG ACCAGGGTTTAGCTGTCTCTTACTTTCAACCGGTGAAATTG < 41bp 1 0.620839858425539 1 0.999154210090637 experiment 0.758320283148922 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MTRNR2L5 ENSG00000249860 CDS Human protein_coding chr10:57359688 chr10:57359699 nonsynonymous SNV 0.125 0 32 hPsi_associated_SNPs_312 0 0 0 0 0 unknown 1 0.439091046928337 0.00169157981872603 1 hPsi_site_7025 iPseU_CNN:0.00169157981872603;iRNA_PseU:1 7026 chr10 72181800 72181800 1 + T C rs150577060 72181784 + 72181764 72181804 41 AGCCCTTAGAGGAAAACAGTTCAACTCTGACTTTCCTAGTT AGCCCTTAGAGGAAAACAGTTCAACTCTGACTTTCCCAGTT < 41bp 1 0.458710809489153 1 0.999999940395355 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide EIF4EBP2 ENSG00000148730 UTR3 Human protein_coding chr10:72181784 chr10:72181800 . . 0 37 hPsi_associated_SNPs_313 0 0 1 0 0 Cytosol 1 0.438715466411501 1.1920928999487e-07 1 hPsi_site_7026 iPseU_CNN:1.1920928999487e-07;iRNA_PseU:1 7027 chr10 72181802 72181802 1 + G C rs7093504 72181784 + 72181764 72181804 41 AGCCCTTAGAGGAAAACAGTTCAACTCTGACTTTCCTAGTT AGCCCTTAGAGGAAAACAGTTCAACTCTGACTTTCCTACTT < 41bp 1 0.609341217454583 1 1 experiment 0.781317565090835 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide EIF4EBP2 ENSG00000148730 UTR3 Human protein_coding chr10:72181784 chr10:72181802 . . 0 39 hPsi_associated_SNPs_314 0 0 1 0 0 Cytosol 1 0.566283004183819 0 0.867433991632362 hPsi_site_7027 iPseU_CNN:0;iRNA_PseU:0.867433991632362 7028 chr10 73062042 73062042 1 + G A rs551881298 73062055 + 73062035 73062075 41 CGTGCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACAT CGTGCGCATGTGCGTGCCTATGCTTTTCTCTGTGGGCACAT < 41bp 1 0.270557153629058 1 0.845870435237885 experiment 1 Functional Loss NA| UNC5B ENSG00000107731 UTR3 Human protein_coding chr10:73062055 chr10:73062042 . . 0 8 hPsi_associated_SNPs_315 0 0 1 0 0 nucleoplasm 1 0.442465249652343 0.30825912952423 1 hPsi_site_7028 iPseU_CNN:0.30825912952423;iRNA_PseU:1 7029 chr10 73062048 73062048 1 + G A rs2275577 73062055 + 73062035 73062075 41 CGTGCGCGTGTGCGTGCCTATGCTTTTCTCTGTGGGCACAT CGTGCGCGTGTGCATGCCTATGCTTTTCTCTGTGGGCACAT < 41bp 1 0.404994739461088 1 0.828721880912781 experiment 1 Functional Loss NA| UNC5B ENSG00000107731 UTR3 Human protein_coding chr10:73062055 chr10:73062048 . . 0 14 hPsi_associated_SNPs_316 0 0 1 0 0 nucleoplasm 1 0.442760924447773 0.342556238174438 1 hPsi_site_7029 iPseU_CNN:0.342556238174438;iRNA_PseU:1 7030 chr10 99433701 99433701 1 + G A rs532988942 99433698 + 99433678 99433718 41 AGTGCTCCTCGCCCTTCTGATGTGGGGGAGGCTGGAGCTCC AGTGCTCCTCGCCCTTCTGATGTAGGGGAGGCTGGAGCTCC < 41bp 1 0.190136300927338 1 0.969179272651672 experiment 1 Functional Loss NA| PI4K2A ENSG00000155252 UTR3 Human protein_coding chr10:99433698 chr10:99433701 . . 0 24 hPsi_associated_SNPs_319 0 0 1 0 0 Ribosome 1 0.43871859299423 0.0616414546966559 1 hPsi_site_7030 iPseU_CNN:0.0616414546966559;iRNA_PseU:1 7031 chr10 99474541 99474541 1 + C T rs188406722 99474546 + 99474526 99474566 41 ATCCGGGGGAGGCTCCCAAATTGGAACCAGGCTTCTGGCTG ATCCGGGGGAGGCTCTCAAATTGGAACCAGGCTTCTGGCTG < 41bp 1 0.534273855574524 1 0.99626213312149 experiment 0.931452288850951 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MARVELD1 ENSG00000155254 UTR3 Human protein_coding chr10:99474546 chr10:99474541 . . 0 16 hPsi_associated_SNPs_320 0 0 1 0 0 Ribosome 1 0.4387185929951 0.00747573375701993 1 hPsi_site_7031 iPseU_CNN:0.00747573375701993;iRNA_PseU:1 7032 chr10 102107162 102107162 1 + G A rs11812482 102107176 + 102107156 102107196 41 CTCAGCGCGTACCGGCGGGCTTCGAAACCGCAGTCCTCCGG CTCAGCACGTACCGGCGGGCTTCGAAACCGCAGTCCTCCGG < 41bp 1 0.669166201798575 1 0.999847173690796 experiment 0.661667596402849 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCD ENSG00000099194 UTR5 Human protein_coding chr10:102107176 chr10:102107162 . . 0 7 hPsi_associated_SNPs_321 0 0 1 0 0 Ribosome 1 0.564335138967289 0.000305652618407981 0.871329722065423 hPsi_site_7032 iPseU_CNN:0.000305652618407981;iRNA_PseU:0.871329722065423 7033 chr10 102107165 102107165 1 + T C rs201287582 102107176 + 102107156 102107196 41 CTCAGCGCGTACCGGCGGGCTTCGAAACCGCAGTCCTCCGG CTCAGCGCGCACCGGCGGGCTTCGAAACCGCAGTCCTCCGG < 41bp 1 0.5651750040816 1 0.999730110168457 experiment 0.8696499918368 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCD ENSG00000099194 UTR5 Human protein_coding chr10:102107176 chr10:102107165 . . 0 10 hPsi_associated_SNPs_322 0 0 1 0 0 Ribosome 1 0.647399593282255 0.000539779663085938 0.70520081343549 hPsi_site_7033 iPseU_CNN:0.000539779663085938;iRNA_PseU:0.70520081343549 7034 chr10 102107170 102107170 1 + G C rs11557928 102107176 + 102107156 102107196 41 CTCAGCGCGTACCGGCGGGCTTCGAAACCGCAGTCCTCCGG CTCAGCGCGTACCGCCGGGCTTCGAAACCGCAGTCCTCCGG < 41bp 1 0.591633203216225 1 0.999986529350281 experiment 0.816733593567551 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCD ENSG00000099194 UTR5 Human protein_coding chr10:102107176 chr10:102107170 . . 0 15 hPsi_associated_SNPs_323 0 0 1 0 0 Ribosome 1 0.438718534750352 2.69412994380325e-05 1 hPsi_site_7034 iPseU_CNN:2.69412994380325e-05;iRNA_PseU:1 7035 chr10 102309121 102309121 1 + G A rs147243741 102309109 + 102309089 102309129 41 TGCTGAGCTTCCTGGCTGAATAGATGAAATGGGGTCAAGCC TGCTGAGCTTCCTGGCTGAATAGATGAAATGGAGTCAAGCC < 41bp 1 0.57907116167668 1 0.993426442146301 experiment 0.841857676646641 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HIF1AN ENSG00000166135 UTR3 Human protein_coding chr10:102309109 chr10:102309121 . . 0 33 hPsi_associated_SNPs_324 0 0 0 0 0 Ribosome 1 0.437194195770746 0.0131471157073979 1 hPsi_site_7035 iPseU_CNN:0.0131471157073979;iRNA_PseU:1 7036 chr10 103920473 103920473 1 + T C rs200099530 103920471 + 103920451 103920491 41 AAGGCGACTGCCAAAGCAGCTCTATCTCTGCCTGCCAAGCA AAGGCGACTGCCAAAGCAGCTCCATCTCTGCCTGCCAAGCA < 41bp 1 0.685243287863462 1 0.40193897485733 experiment 0.629513424273076 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920471 chr10:103920473 nonsynonymous SNV 0.021 0 23 hPsi_associated_SNPs_325 0 0 1 0 0 Nucleus 1 0.438718342750898 1 1 hPsi_site_7036 iPseU_CNN:1;iRNA_PseU:1 7037 chr10 103920475 103920475 1 + T C rs1049455 103920471 + 103920451 103920491 41 AAGGCGACTGCCAAAGCAGCTCTATCTCTGCCTGCCAAGCA AAGGCGACTGCCAAAGCAGCTCTACCTCTGCCTGCCAAGCA < 41bp 1 0.516788862182594 1 0.982966780662537 experiment 0.966422275634812 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920471 chr10:103920475 nonsynonymous SNV 0.035 0 25 hPsi_associated_SNPs_326 0 0 1 0 0 Nucleus 1 0.767032824665345 0.0340664386749261 0.465934350669311 hPsi_site_7037 iPseU_CNN:0.0340664386749261;iRNA_PseU:0.465934350669311 Chronic inflammatory diseases (ankylosing spondylitis, Crohn's disease, psoriasis, primary sclerosing cholangitis, ulcerative colitis) (pleiotropy) 7038 chr10 104623570 104623570 1 + T G rs186856196 104623552 + 104623532 104623572 41 AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGC AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCGGC < 41bp 1 0.68198540010445 1 0.986796259880066 experiment 0.636029199791101 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BORCS7-ASMT ENSG00000166275 UTR3 Human protein_coding chr10:104623552 chr10:104623570 . . 0 39 hPsi_associated_SNPs_327 0 0 0 3 1 exosome 1 0.438728081020991 0.0264074802398679 1 hPsi_site_7038 iPseU_CNN:0.0264074802398679;iRNA_PseU:1 7039 chr10 106059124 106059124 1 + C T rs557170796 106059138 + 106059118 106059158 41 CCAATCCGTCTCTCTTTCTTTTCTTTGAAGTTCCCAATAAA CCAATCTGTCTCTCTTTCTTTTCTTTGAAGTTCCCAATAAA < 41bp 1 0.640905746486355 1 0.99956738948822 experiment 0.718188507027291 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GSTO2 ENSG00000065621 UTR3 Human protein_coding chr10:106059138 chr10:106059124 . . 0 7 hPsi_associated_SNPs_328 0 0 0 0 0 Cytosol 1 0.440404949984114 0.000865221023560014 1 hPsi_site_7039 iPseU_CNN:0.000865221023560014;iRNA_PseU:1 7040 chr10 131934648 131934648 1 + C A rs2274219 131934665 + 131934645 131934685 41 GGCCGCCGGCACTGGATTGCTTCTGTCTGGCGGCGGCAGCA GGCAGCCGGCACTGGATTGCTTCTGTCTGGCGGCGGCAGCA < 41bp 1 0.677279021324888 1 0.994947671890259 experiment 0.645441957350223 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GLRX3 ENSG00000108010 upstream Human protein_coding chr10:131934665 chr10:131934648 . . 0 4 hPsi_associated_SNPs_330 0 0 0 0 0 Cytosol 1 0.438684722706376 0.010104656219482 1 hPsi_site_7040 iPseU_CNN:0.010104656219482;iRNA_PseU:1 7041 chr10 131934654 131934654 1 + C G rs2274218 131934665 + 131934645 131934685 41 GGCCGCCGGCACTGGATTGCTTCTGTCTGGCGGCGGCAGCA GGCCGCCGGGACTGGATTGCTTCTGTCTGGCGGCGGCAGCA < 41bp 1 0.651193254852047 1 0.972135782241821 experiment 0.697613490295906 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GLRX3 ENSG00000108010 upstream Human protein_coding chr10:131934665 chr10:131934654 . . 0 10 hPsi_associated_SNPs_331 0 0 1 0 0 Cytosol 1 0.438975195383421 0.0557284355163581 1 hPsi_site_7041 iPseU_CNN:0.0557284355163581;iRNA_PseU:1 7042 chr11 489433 489433 1 + G A rs75188178 489437 + 489417 489457 41 TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG TCGCCTTCCAGTTCACACCGTACAGCTGGGTTCGCTTCGAG < 41bp 1 0.652813522906541 1 0.999950170516968 experiment 0.694372954186917 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489437 chr11:489433 synonymous SNV . 0 17 hPsi_associated_SNPs_332 0 0 1 0 2 Ribosome 1 0.452171706505216 9.9658966064009e-05 1 hPsi_site_7042 iPseU_CNN:9.9658966064009e-05;iRNA_PseU:1 7043 chr11 489436 489436 1 + G A rs112480384 489437 + 489417 489457 41 TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG TCGCCTTCCAGTTCACGCCATACAGCTGGGTTCGCTTCGAG < 41bp 1 0.530347094377701 1 0.997992932796478 experiment 0.939305811244599 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489437 chr11:489436 synonymous SNV . 0 20 hPsi_associated_SNPs_333 0 0 1 0 2 Ribosome 1 0.439172159987763 0.0040141344070439 1 hPsi_site_7043 iPseU_CNN:0.0040141344070439;iRNA_PseU:1 7044 chr11 10801103 10801103 1 + A G rs114631799 10801089 + 10801069 10801109 41 AGATTGAGAATATTTTTATTTTCTGAAGGCAGAGATATCTA AGATTGAGAATATTTTTATTTTCTGAAGGCAGAGGTATCTA < 41bp 1 0.63753446639227 1 0.976382970809937 experiment 0.72493106721546 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CTR9 ENSG00000198730 UTR3 Human protein_coding chr11:10801089 chr11:10801103 . . 0 35 hPsi_associated_SNPs_335 0 0 1 7 0 Cytosol 1 0.479846708342836 0.0472340583801261 1 hPsi_site_7044 iPseU_CNN:0.0472340583801261;iRNA_PseU:1 7045 chr11 50375281 50375281 1 + C T rs573549582 50375300 + 50375280 50375320 41 CCTGAAGTTCACATTGTTCTTATGTCTGCTACTATTGATAC CTTGAAGTTCACATTGTTCTTATGTCTGCTACTATTGATAC < 41bp 1 0.66381754233244 1 0.981097638607025 experiment 0.672364915335119 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LOC646813 ENSG00000214883 ncRNA_exonic Human unprocessed_pseudogene chr11:50375300 chr11:50375281 . . 0 2 hPsi_associated_SNPs_337 0 0 0 0 1 unknown 1 0.439073708440784 0.0378047227859499 1 hPsi_site_7045 iPseU_CNN:0.0378047227859499;iRNA_PseU:1 7046 chr11 50375313 50375313 1 + A G rs542224223 50375300 + 50375280 50375320 41 CCTGAAGTTCACATTGTTCTTATGTCTGCTACTATTGATAC CCTGAAGTTCACATTGTTCTTATGTCTGCTACTGTTGATAC < 41bp 1 0.642548589303394 1 0.98645031452179 experiment 0.714902821393213 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LOC646813 ENSG00000214883 ncRNA_exonic Human unprocessed_pseudogene chr11:50375300 chr11:50375313 . . 0 34 hPsi_associated_SNPs_338 0 0 0 0 2 unknown 1 0.995640528416685 0.02709937095642 0.00871894316663036 hPsi_site_7046 iPseU_CNN:0.02709937095642;iRNA_PseU:0.00871894316663036 7047 chr11 57509037 57509037 1 + C T rs116830030 57509041 + 57509021 57509061 41 CCCCCACCCACCAGTCCCGCTGCATTCTCGGCCGGGCTCTA CCCCCACCCACCAGTCTCGCTGCATTCTCGGCCGGGCTCTA < 41bp 1 0.516518900638979 1 0.931058287620544 experiment 0.966962198722042 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMX2-CTNND1 ENSG00000211450 UTR5 Human protein_coding chr11:57509041 chr11:57509037 . . 0 17 hPsi_associated_SNPs_340 0 0 1 0 0 exosome 1 0.438730155700912 0.137883424758912 1 hPsi_site_7047 iPseU_CNN:0.137883424758912;iRNA_PseU:1 7048 chr11 57509049 57509049 1 + C G rs114953011 57509041 + 57509021 57509061 41 CCCCCACCCACCAGTCCCGCTGCATTCTCGGCCGGGCTCTA CCCCCACCCACCAGTCCCGCTGCATTCTGGGCCGGGCTCTA < 41bp 1 0.486937379243894 1 0.780214726924896 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMX2-CTNND1 ENSG00000211450 UTR5 Human protein_coding chr11:57509041 chr11:57509049 . . 0 29 hPsi_associated_SNPs_341 0 0 1 0 0 exosome 1 0.438724184173325 0.439570546150208 1 hPsi_site_7048 iPseU_CNN:0.439570546150208;iRNA_PseU:1 7049 chr11 59568989 59568989 1 + C G rs149572486 59568980 + 59568960 59569000 41 TCAAGGAGGGACCAGGATGATACAGTCATCTGAGGTTATGC TCAAGGAGGGACCAGGATGATACAGTCATGTGAGGTTATGC < 41bp 1 0.682607109505874 1 0.7832390666008 experiment 0.634785780988252 Functional Loss NA| STX3 ENSG00000166900 UTR3 Human protein_coding chr11:59568980 chr11:59568989 . . 0 30 hPsi_associated_SNPs_342 0 0 1 1 0 Cytosol 1 0.439271006197185 0.4335218667984 1 hPsi_site_7049 iPseU_CNN:0.4335218667984;iRNA_PseU:1 7050 chr11 60609713 60609713 1 + C G rs555300101 60609706 + 60609686 60609726 41 GGGCCCTTGTGGAGTTCGAGTCGAACCCAGAAGAAACGAGG GGGCCCTTGTGGAGTTCGAGTCGAACCGAGAAGAAACGAGG < 41bp 1 0.320688547983494 1 0.986962497234344 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60609706 chr11:60609713 nonsynonymous SNV 0.231 1 28 hPsi_associated_SNPs_343 0 0 1 0 0 Ribosome 1 0.438731578667426 0.0260750055313119 1 hPsi_site_7050 iPseU_CNN:0.0260750055313119;iRNA_PseU:1 7051 chr11 61105458 61105458 1 + G A rs200271810 61105451 + 61105431 61105471 41 AACTCGGTGGCTGGCTGTGCTGATGACGCTCTTGCTGGCCT AACTCGGTGGCTGGCTGTGCTGATGACACTCTTGCTGGCCT < 41bp 1 0.398443672717615 1 0.998953402042389 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61105451 chr11:61105458 nonsynonymous SNV 0.994 2 28 hPsi_associated_SNPs_344 0 0 1 0 0 Cytosol 1 0.479406299277896 0.00209319591522195 1 hPsi_site_7051 iPseU_CNN:0.00209319591522195;iRNA_PseU:1 7052 chr11 64878234 64878234 1 + G C rs138579763 64878220 + 64878200 64878240 41 CAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGT CAGAAGCTATTCTCTGAACGTATTGATGTGTTCACCCCTGT < 41bp 1 0.540566979612468 1 0.999805569648743 experiment 0.918866040775064 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VPS51 ENSG00000149823 CDS Human protein_coding chr11:64878220 chr11:64878234 nonsynonymous SNV 0.993 1 35 hPsi_associated_SNPs_345 0 0 1 0 2 Ribosome 1 0.441731003997083 0.000388860702513982 1 hPsi_site_7052 iPseU_CNN:0.000388860702513982;iRNA_PseU:1 7053 chr11 64894050 64894050 1 + G A rs111359194 64894031 + 64894011 64894051 41 AGGGCAGAGCCACTGGGCACTTTGTTTCCTTGGCCCTCCGA AGGGCAGAGCCACTGGGCACTTTGTTTCCTTGGCCCTCCAA < 41bp 1 0.602848086539237 1 0.999800682067871 experiment 0.794303826921527 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MRPL49 ENSG00000149792 UTR3 Human protein_coding chr11:64894031 chr11:64894050 . . 0 40 hPsi_associated_SNPs_346 0 0 1 0 0 Ribosome 1 0.438718592998136 0.000398635864258035 1 hPsi_site_7053 iPseU_CNN:0.000398635864258035;iRNA_PseU:1 7054 chr11 64950376 64950376 1 + G C rs17881440 64950363 + 64950343 64950383 41 TGATGAGGCCTTCCCCCCGGTACCCCAGAGCCTGGGTTACA TGATGAGGCCTTCCCCCCGGTACCCCAGAGCCTCGGTTACA < 41bp 1 0.671857411598008 1 0.927327156066895 experiment 0.656285176803983 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950363 chr11:64950376 synonymous SNV . 0 34 hPsi_associated_SNPs_347 0 0 1 0 1 Ribosome 1 0.438724577415701 0.14534568786621 1 hPsi_site_7054 iPseU_CNN:0.14534568786621;iRNA_PseU:1 7055 chr11 65268605 65268605 1 + A C rs546886859 65268606 + 65268586 65268626 41 AAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTC AAGTATTTCAGTTTTGTGACTAGATGACCTGTTTTTACTTC < 41bp 1 0.459368240754764 1 0.497050404548645 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268606 chr11:65268605 . . 0 20 hPsi_associated_SNPs_348 0 0 1 0 0 unknown 1 0.438708551482703 1 1 hPsi_site_7055 iPseU_CNN:1;iRNA_PseU:1 7056 chr11 67351297 67351297 1 + G A rs8191439 67351291 + 67351271 67351311 41 CGCGAGGCCTTCGCTGGAGTTTCGCCGCCGCAGTCTTCGCC CGCGAGGCCTTCGCTGGAGTTTCGCCACCGCAGTCTTCGCC < 41bp 1 0.539294645823121 1 0.999967396259308 experiment 0.921410708353759 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GSTP1 ENSG00000084207 UTR5 Human protein_coding chr11:67351291 chr11:67351297 . . 0 27 hPsi_associated_SNPs_350 0 0 1 0 1 Cytosol 1 0.439039137628899 6.52074813840553e-05 1 hPsi_site_7056 iPseU_CNN:6.52074813840553e-05;iRNA_PseU:1 7057 chr11 76261821 76261821 1 + C G rs148932730 76261831 + 76261811 76261851 41 TGTATTGTTCCTTTGTGCTCTAAGCAGCACACTTGCCTTCT TGTATTGTTCGTTTGTGCTCTAAGCAGCACACTTGCCTTCT < 41bp 1 0.657352185982683 1 0.989940226078033 experiment 0.685295628034633 Functional Loss NA| EMSY ENSG00000158636 UTR3 Human protein_coding chr11:76261831 chr11:76261821 . . 0 11 hPsi_associated_SNPs_351 0 0 1 2 0 Nucleus 1 0.665308451593409 0.020119547843934 0.669383096813182 hPsi_site_7057 iPseU_CNN:0.020119547843934;iRNA_PseU:0.669383096813182 7058 chr11 93862540 93862540 1 + C G rs558951523 93862521 + 93862501 93862541 41 CGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGCCCACG CGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGCCCAGG < 41bp 1 0.695106719430137 1 0.995812952518463 experiment 0.609786561139726 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PANX1 ENSG00000110218 CDS Human protein_coding chr11:93862521 chr11:93862540 nonsynonymous SNV 0.973 0 40 hPsi_associated_SNPs_352 0 0 1 0 0 Endoplasmic reticulum 1 0.439525918245988 0.00837409496307395 1 hPsi_site_7058 iPseU_CNN:0.00837409496307395;iRNA_PseU:1 7059 chr11 111414734 111414734 1 + G A rs11827718 111414729 + 111414709 111414749 41 TACTTCTCGAAGACTGAACTTTGAGGAAGCCAAAGAAGCCT TACTTCTCGAAGACTGAACTTTGAGAAAGCCAAAGAAGCCT < 41bp 1 0.538945163690318 1 0.995220363140106 experiment 0.922109672619364 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LAYN ENSG00000204381 CDS Human protein_coding chr11:111414729 chr11:111414734 nonsynonymous SNV 1.000 4 26 hPsi_associated_SNPs_353 0 0 0 0 1 exosome 1 0.43871876979719 0.00955927371978804 1 hPsi_site_7059 iPseU_CNN:0.00955927371978804;iRNA_PseU:1 7060 chr11 111753295 111753295 1 + C T rs149643419 111753292 + 111753272 111753312 41 GAAAGATATGACCTGAGGAATATCGTGCAGCCCAAACCCTT GAAAGATATGACCTGAGGAATATTGTGCAGCCCAAACCCTT < 41bp 1 0.475341266337854 1 0.999808967113495 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C11orf1 ENSG00000137720 CDS Human protein_coding chr11:111753292 chr11:111753295 synonymous SNV . 0 24 hPsi_associated_SNPs_354 0 0 1 0 1 Cytosol 1 0.438720254045491 0.000382065773010032 1 hPsi_site_7060 iPseU_CNN:0.000382065773010032;iRNA_PseU:1 7061 chr11 111896099 111896099 1 + G A rs587594591 111896087 + 111896067 111896107 41 GAGTAAACCTGCGGGAACCATTTTACGACAACGTGCGGCTG GAGTAAACCTGCGGGAACCATTTTACGACAACATGCGGCTG < 41bp 1 0.285997124438768 1 0.970895290374756 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DLAT ENSG00000150768 UTR5 Human protein_coding chr11:111896087 chr11:111896099 . . 0 33 hPsi_associated_SNPs_355 0 0 1 0 0 Cytosol 1 0.440863018500923 0.0582094192504881 1 hPsi_site_7061 iPseU_CNN:0.0582094192504881;iRNA_PseU:1 7062 chr11 122889271 122889271 1 + C A rs142217458 122889279 + 122889259 122889299 41 GGGATTTTGGCACAGGAAATTGTGAAGGCCCTGTCTCAGCA GGGATTTTGGCAAAGGAAATTGTGAAGGCCCTGTCTCAGCA < 41bp 1 0.399825113168476 1 0.99998277425766 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LOC341056 ENSG00000213184 ncRNA_exonic Human processed_pseudogene chr11:122889279 chr11:122889271 . . 0 13 hPsi_associated_SNPs_356 0 0 0 0 0 unknown 1 0.565838218136953 3.44514846799537e-05 0.868323563726094 hPsi_site_7062 iPseU_CNN:3.44514846799537e-05;iRNA_PseU:0.868323563726094 7063 chr11 126126614 126126614 1 + A G rs138771805 126126631 + 126126611 126126651 41 CGTAGATGAGTTCAAAAAGCTTCGAGAAAACATGCTGGACA CGTGGATGAGTTCAAAAAGCTTCGAGAAAACATGCTGGACA < 41bp 1 0.592107057734094 1 0.99913763999939 experiment 0.815785884531812 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAM118B ENSG00000197798 CDS Human protein_coding chr11:126126631 chr11:126126614 synonymous SNV . 0 4 hPsi_associated_SNPs_357 0 0 1 0 0 Ribosome 1 0.540211700815485 0.00172472000122004 0.91957659836903 hPsi_site_7063 iPseU_CNN:0.00172472000122004;iRNA_PseU:0.91957659836903 7064 chr11 134239760 134239760 1 + C T rs34063963 134239753 + 134239733 134239773 41 CACGGCCAAGTACATGAAGCTTCGAGACTTCTTCGGCTCCA CACGGCCAAGTACATGAAGCTTCGAGATTTCTTCGGCTCCA < 41bp 1 0.658232731103332 1 0.999999761581421 experiment 0.683534537793337 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134239753 chr11:134239760 synonymous SNV . 0 28 hPsi_associated_SNPs_358 0 0 1 0 2 Ribosome 1 0.540211972559676 4.7683715798108e-07 0.919576054880648 hPsi_site_7064 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:0.919576054880648 7065 chr12 6604269 6604269 1 + C G rs149571298 6604255 + 6604235 6604275 41 TTTCTAGCCCTGTGAGCCTGTAGGAGTAGAATGGCTCCCCA TTTCTAGCCCTGTGAGCCTGTAGGAGTAGAATGGGTCCCCA < 41bp 1 0.353204391630697 1 0.997043967247009 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6604255 chr12:6604269 nonsynonymous SNV 0.519 0 35 hPsi_associated_SNPs_360 0 0 1 0 1 Nucleus 1 0.438718611157985 0.00591206550598189 1 hPsi_site_7065 iPseU_CNN:0.00591206550598189;iRNA_PseU:1 7066 chr12 6604272 6604272 1 + C A rs144221350 6604255 + 6604235 6604275 41 TTTCTAGCCCTGTGAGCCTGTAGGAGTAGAATGGCTCCCCA TTTCTAGCCCTGTGAGCCTGTAGGAGTAGAATGGCTCACCA < 41bp 1 0.425215056326702 1 0.999889612197876 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6604255 chr12:6604272 nonsynonymous SNV 0.512 1 38 hPsi_associated_SNPs_361 0 0 1 0 1 Nucleus 1 0.43848540013528 0.000220775604248047 1 hPsi_site_7066 iPseU_CNN:0.000220775604248047;iRNA_PseU:1 7067 chr12 6969339 6969339 1 + C G rs138839223 6969351 + 6969331 6969371 41 GGCCTTCTCTCCGGGGAGTATTCCAAGCCAGTACCGGAGTC GGCCTTCTGTCCGGGGAGTATTCCAAGCCAGTACCGGAGTC < 41bp 1 0.537439060763616 1 0.988449454307556 experiment 0.925121878472768 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969351 chr12:6969339 synonymous SNV . 0 9 hPsi_associated_SNPs_362 0 0 1 0 2 Nucleus 1 0.438768631651523 0.0231010913848879 1 hPsi_site_7067 iPseU_CNN:0.0231010913848879;iRNA_PseU:1 7068 chr12 6971703 6971703 1 + C T rs782673222 6971692 + 6971672 6971712 41 TCCAGATCAAGAAGTTCACCTTCGGCTTAGACTGGGTGCCC TCCAGATCAAGAAGTTCACCTTCGGCTTAGATTGGGTGCCC < 41bp 1 0.321848310272724 1 0.929618954658508 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6971692 chr12:6971703 synonymous SNV . 0 32 hPsi_associated_SNPs_363 0 0 1 0 2 Nucleus 1 0.480314997240309 0.140762090682984 1 hPsi_site_7068 iPseU_CNN:0.140762090682984;iRNA_PseU:1 7069 chr12 7283255 7283255 1 + T A rs202132447 7283267 + 7283247 7283287 41 GACCCTCCTGCTGCTGCCCCTTCTGCTGGCCTCTCTGCTCG GACCCTCCAGCTGCTGCCCCTTCTGCTGGCCTCTCTGCTCG < 41bp 1 0.30331325051032 1 0.999656200408936 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7283267 chr12:7283255 nonsynonymous SNV 0.975 1 9 hPsi_associated_SNPs_364 0 0 1 0 1 Endoplasmic reticulum 1 0.930727505302115 0.000687599182128018 0.138544989395769 hPsi_site_7069 iPseU_CNN:0.000687599182128018;iRNA_PseU:0.138544989395769 7070 chr12 7283287 7283287 1 + G A rs145190321 7283267 + 7283247 7283287 41 GACCCTCCTGCTGCTGCCCCTTCTGCTGGCCTCTCTGCTCG GACCCTCCTGCTGCTGCCCCTTCTGCTGGCCTCTCTGCTCA < 41bp 1 0.365541544321841 1 0.996569871902466 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7283267 chr12:7283287 nonsynonymous SNV 0.010 0 41 hPsi_associated_SNPs_365 0 0 1 0 1 Endoplasmic reticulum 1 0.443617223457285 0.00686025619506792 1 hPsi_site_7070 iPseU_CNN:0.00686025619506792;iRNA_PseU:1 7071 chr12 38722926 38722926 1 + A G rs141938577 38722946 + 38722926 38722966 41 AATGTGATTATACTTCCTAGTTTTATAGGTCAGAAAAATGA GATGTGATTATACTTCCTAGTTTTATAGGTCAGAAAAATGA < 41bp 1 0.359832096265815 1 0.996527791023254 experiment 1 Functional Loss NA| ALG10B ENSG00000175548;ENSG00000256878 intergenic Human other chr12:38722946 chr12:38722926 . . 0 1 hPsi_associated_SNPs_366 0 0 0 0 0 Nucleus 1 0.438764657007448 0.0069444179534921 1 hPsi_site_7071 iPseU_CNN:0.0069444179534921;iRNA_PseU:1 7072 chr12 50514175 50514175 1 + T G rs149858137 50514173 + 50514153 50514193 41 TTTGACAGTTTATGGAGGCTTTTGAATCGTAATAGCAATGT TTTGACAGTTTATGGAGGCTTTGGAATCGTAATAGCAATGT < 41bp 1 0.136750542147747 1 0.899995505809784 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control COX14 ENSG00000272368 ncRNA_intronic Human antisense chr12:50514173 chr12:50514175 . . 0 23 hPsi_associated_SNPs_367 0 0 1 4 0 Ribosome 1 0.451607244051028 0.200008988380432 1 hPsi_site_7072 iPseU_CNN:0.200008988380432;iRNA_PseU:1 7073 chr12 50514190 50514190 1 + A G rs116454323 50514173 + 50514153 50514193 41 TTTGACAGTTTATGGAGGCTTTTGAATCGTAATAGCAATGT TTTGACAGTTTATGGAGGCTTTTGAATCGTAATAGCAGTGT < 41bp 1 0.233704007905603 1 0.864564418792725 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control COX14 ENSG00000272368 ncRNA_intronic Human antisense chr12:50514173 chr12:50514190 . . 0 38 hPsi_associated_SNPs_368 0 0 1 4 0 Ribosome 1 0.89332593784791 0.27087116241455 0.213348124304179 hPsi_site_7073 iPseU_CNN:0.27087116241455;iRNA_PseU:0.213348124304179 7074 chr12 53689331 53689331 1 + C T rs111794761 53689329 + 53689309 53689349 41 GCTCGCCGAGAGACTTCCTCTTCGTTAAGTCGGCCTTCCCA GCTCGCCGAGAGACTTCCTCTTTGTTAAGTCGGCCTTCCCA < 41bp 1 0.275012171242887 1 0.986615359783173 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PFDN5 ENSG00000123349 UTR5 Human protein_coding chr12:53689329 chr12:53689331 . . 0 23 hPsi_associated_SNPs_369 0 0 1 0 1 Ribosome 1 0.438718936451866 0.0267692804336539 1 hPsi_site_7074 iPseU_CNN:0.0267692804336539;iRNA_PseU:1 7075 chr12 53895412 53895412 1 + G A rs531501207 53895423 + 53895403 53895443 41 CTGCCTCCAGCTCTAAATAGTTTGGGGTTGGCCCGGTTCCC CTGCCTCCAACTCTAAATAGTTTGGGGTTGGCCCGGTTCCC < 41bp 1 0.554536010762041 1 0.987585663795471 experiment 0.890927978475919 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TARBP2 ENSG00000139546 UTR5 Human protein_coding chr12:53895423 chr12:53895412 . . 0 10 hPsi_associated_SNPs_371 0 0 1 0 1 Cytosol 1 0.452858895227376 0.0248286724090581 1 hPsi_site_7075 iPseU_CNN:0.0248286724090581;iRNA_PseU:1 Visceral adipose tissue/subcutaneous adipose tissue ratio 7076 chr12 57627074 57627074 1 + G A rs2229717 57627054 + 57627034 57627074 41 CATTTGAGGACCGAATCAACTTTGCCGTGTTCCCATCCCTG CATTTGAGGACCGAATCAACTTTGCCGTGTTCCCATCCCTA < 41bp 1 0.594605833914181 1 0.996692180633545 experiment 0.810788332171639 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627054 chr12:57627074 synonymous SNV . 0 41 hPsi_associated_SNPs_373 0 0 1 0 1 Cytosol 1 0.522082907400263 0.00661563873290993 0.955834185199474 hPsi_site_7076 iPseU_CNN:0.00661563873290993;iRNA_PseU:0.955834185199474 7077 chr12 58176589 58176589 1 + C T rs35957924 58176586 + 58176566 58176606 41 GTTTATCGCGGCTAGAGAGATGTCGCTGCTGCGGTCGCTGC GTTTATCGCGGCTAGAGAGATGTTGCTGCTGCGGTCGCTGC < 41bp 1 0.518605944188243 1 0.993559122085571 experiment 0.962788111623514 Functional Loss NA| TSFM ENSG00000123297 CDS Human protein_coding chr12:58176586 chr12:58176589 nonsynonymous SNV 0.088 0 24 hPsi_associated_SNPs_374 0 0 1 0 1 Cytosol 1 0.476933130896221 0.0128817558288581 1 hPsi_site_7077 iPseU_CNN:0.0128817558288581;iRNA_PseU:1 7078 chr12 93896245 93896245 1 + C G rs146746826 93896255 + 93896235 93896275 41 ATTGTTTGATCTAGTTATTTTAATAAAGGAACTCTAGAAGT ATTGTTTGATGTAGTTATTTTAATAAAGGAACTCTAGAAGT < 41bp 1 0.176968751159239 1 0.441529184579849 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MRPL42 ENSG00000198015 UTR3 Human protein_coding chr12:93896255 chr12:93896245 . . 0 11 hPsi_associated_SNPs_376 0 0 1 0 0 Cytosol 1 0.440591119310482 1 1 hPsi_site_7078 iPseU_CNN:1;iRNA_PseU:1 7079 chr12 101683929 101683929 1 + C T rs703715 101683941 + 101683921 101683961 41 GATAAAAACGCACTTTTCAATTTAATGTTTCTTGATCTTGA GATAAAAATGCACTTTTCAATTTAATGTTTCTTGATCTTGA < 41bp 1 0.245210126173321 1 0.96245801448822 experiment 1 Functional Loss NA| UTP20 ENSG00000120800 CDS Human protein_coding chr12:101683941 chr12:101683929 synonymous SNV . 0 9 hPsi_associated_SNPs_377 0 0 1 0 1 Cytosol 1 0.442786802371727 0.07508397102356 1 hPsi_site_7079 iPseU_CNN:0.07508397102356;iRNA_PseU:1 7080 chr12 102108345 102108345 1 + T C rs3205421 102108355 + 102108335 102108375 41 TGGTTTTTTTTCTGCTCTTTTATTGGGATGTTTGTGTTTTA TGGTTTTTTTCCTGCTCTTTTATTGGGATGTTTGTGTTTTA < 41bp 1 0.660988470027453 1 0.977236390113831 experiment 0.678023059945095 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102108355 chr12:102108345 nonsynonymous SNV 1.000 4 11 hPsi_associated_SNPs_378 0 0 1 2 2 Ribosome 1 0.441642165138818 0.045527219772338 1 hPsi_site_7080 iPseU_CNN:0.045527219772338;iRNA_PseU:1 7081 chr12 122216335 122216335 1 + T G rs141972494 122216349 + 122216329 122216369 41 CCTGAGTGACAGAATGAGACTCTGTCCCAAAAAAAAAAAAA CCTGAGGGACAGAATGAGACTCTGTCCCAAAAAAAAAAAAA < 41bp 1 0.317465174026598 1 0.995226621627808 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RHOF;TMEM120B ENSG00000139725;ENSG00000188735 UTR3 Human other chr12:122216349 chr12:122216335 . . 0 7 hPsi_associated_SNPs_379 0 0 0 0 0 unknown 1 0.438718592923821 0.0095467567443841 1 hPsi_site_7081 iPseU_CNN:0.0095467567443841;iRNA_PseU:1 7082 chr12 122628578 122628578 1 + A G rs538590030 122628590 + 122628570 122628610 41 TCTGCTGCAGACATGATTGTTTCTTGTTCTAGAGGTTTTCT TCTGCTGCGGACATGATTGTTTCTTGTTCTAGAGGTTTTCT < 41bp 1 0.625184454468047 1 0.969565987586975 experiment 0.749631091063907 Functional Loss NA| MLXIP ENSG00000175727 UTR3 Human protein_coding chr12:122628590 chr12:122628578 . . 0 9 hPsi_associated_SNPs_380 0 0 1 0 0 chromatin 1 0.438718549487043 0.06086802482605 1 hPsi_site_7082 iPseU_CNN:0.06086802482605;iRNA_PseU:1 7083 chr12 125627723 125627723 1 + C A rs2297477 125627736 + 125627716 125627756 41 CTCTAATCTGATGTCCATTTTTATATTTTTTGAAACTGAGC CTCTAATATGATGTCCATTTTTATATTTTTTGAAACTGAGC < 41bp 1 0.494548456778191 1 0.772168040275574 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock AACS ENSG00000081760 UTR3 Human protein_coding chr12:125627736 chr12:125627723 . . 0 8 hPsi_associated_SNPs_381 0 0 1 0 0 Ribosome 1 0.438718668540651 0.455663919448852 1 hPsi_site_7083 iPseU_CNN:0.455663919448852;iRNA_PseU:1 7084 chr13 32953550 32953550 1 + G A rs11571769 32953554 + 32953534 32953574 41 GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGG GTTGGAAATTAGGAAGACCATGGAATCTGCTGAACAAAAGG < 41bp 1 0.261285784416878 1 0.0916339457035065 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32953554 chr13:32953550 nonsynonymous SNV 0.942 4 17 hPsi_associated_SNPs_382 7 0 1 0 0 Nucleus 1 0.515415170339422 1 0.969169659321156 hPsi_site_7084 iPseU_CNN:1;iRNA_PseU:0.969169659321156 7085 chr13 45952692 45952692 1 + T G rs112229926 45952691 + 45952671 45952711 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGG GTAGATTGCAAATGACCTGCTGTCTTTCTGTTCCCGGGCGG < 41bp 1 0.664092119817333 1 0.954321384429932 experiment 0.671815760365334 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45952691 chr13:45952692 . . 0 22 hPsi_associated_SNPs_383 0 0 1 0 1 unknown 1 0.440279437171824 0.0913572311401361 1 hPsi_site_7085 iPseU_CNN:0.0913572311401361;iRNA_PseU:1 7086 chr13 45952709 45952709 1 + C T rs571894217 45952691 + 45952671 45952711 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGG GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGG < 41bp 1 0.556103255921724 1 0.998737335205078 experiment 0.887793488156551 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45952691 chr13:45952709 . . 0 39 hPsi_associated_SNPs_384 0 0 1 0 2 unknown 1 0.999998109600314 0.00252532958984397 3.78079937268794e-06 hPsi_site_7086 iPseU_CNN:0.00252532958984397;iRNA_PseU:3.78079937268794e-06 7087 chr13 45953337 45953337 1 + T G rs531109288 45953356 + 45953336 45953376 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGG GGAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGG < 41bp 1 0.642522963139179 1 0.992580056190491 experiment 0.714954073721642 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45953356 chr13:45953337 . . 0 2 hPsi_associated_SNPs_385 0 0 0 0 1 unknown 1 0.447288216279304 0.0148398876190181 1 hPsi_site_7087 iPseU_CNN:0.0148398876190181;iRNA_PseU:1 7088 chr13 45953349 45953349 1 + G A rs571024999 45953356 + 45953336 45953376 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGG GTAGATTGCAAATAACCTGCTTTCTTTCTGTTCCCGGGTGG < 41bp 1 0.576086949537354 1 0.999874651432037 experiment 0.847826100925293 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45953356 chr13:45953349 . . 0 14 hPsi_associated_SNPs_386 0 0 0 0 1 unknown 1 0.451261463050924 0.000250697135925959 1 hPsi_site_7088 iPseU_CNN:0.000250697135925959;iRNA_PseU:1 7089 chr13 45953363 45953363 1 + C T rs4614622 45953356 + 45953336 45953376 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGG GTAGATTGCAAATGACCTGCTTTCTTTTTGTTCCCGGGTGG < 41bp 1 0.504767597467374 1 0.998351097106934 experiment 0.990464805065251 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45953356 chr13:45953363 . . 0 28 hPsi_associated_SNPs_387 0 0 1 0 1 unknown 1 0.769103838845634 0.00329780578613192 0.461792322308731 hPsi_site_7089 iPseU_CNN:0.00329780578613192;iRNA_PseU:0.461792322308731 7090 chr13 45957233 45957233 1 + T C rs187141924 45957252 + 45957232 45957272 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTG GCAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTG < 41bp 1 0.58195749438185 1 0.997146606445312 experiment 0.8360850112363 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45957252 chr13:45957233 . . 0 2 hPsi_associated_SNPs_388 0 0 0 0 1 unknown 1 0.955958577369362 0.00570678710937611 0.0880828452612761 hPsi_site_7090 iPseU_CNN:0.00570678710937611;iRNA_PseU:0.0880828452612761 7091 chr13 45957245 45957245 1 + G A rs61220735 45957252 + 45957232 45957272 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTG GTAGATTGCAAATAACCTGCTTTCTTTCTGTTCCCGGGCTG < 41bp 1 0.547420899317752 1 0.999955654144287 experiment 0.905158201364497 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45957252 chr13:45957245 . . 0 14 hPsi_associated_SNPs_389 0 0 0 0 1 unknown 1 0.455691067200165 8.86917114260033e-05 1 hPsi_site_7091 iPseU_CNN:8.86917114260033e-05;iRNA_PseU:1 7092 chr13 46056545 46056545 1 + T C rs546107254 46056557 + 46056537 46056577 41 TCGGTGAATAGTGACGGATTTATACCTATGCTGGCCAAGTT TCGGTGAACAGTGACGGATTTATACCTATGCTGGCCAAGTT < 41bp 1 0.513019340443422 1 0.999984204769135 experiment 0.973961319113155 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COG3 ENSG00000136152 CDS Human protein_coding chr13:46056557 chr13:46056545 synonymous SNV . 0 9 hPsi_associated_SNPs_390 0 0 0 1 2 Nucleus 1 0.460453884625524 3.15904617300689e-05 1 hPsi_site_7092 iPseU_CNN:3.15904617300689e-05;iRNA_PseU:1 7093 chr13 98672037 98672037 1 + C G rs143227504 98672041 + 98672021 98672061 41 AAGCTGTTCAGACTTTCAATTATCTGTGTGACCTGATTGAA AAGCTGTTCAGACTTTGAATTATCTGTGTGACCTGATTGAA < 41bp 1 0.449624651049622 1 0.993255496025085 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control IPO5 ENSG00000065150 CDS Human protein_coding chr13:98672041 chr13:98672037 nonsynonymous SNV 0.999 1 17 hPsi_associated_SNPs_391 0 0 1 0 1 Ribosome 1 0.447439481556219 0.01348900794983 1 hPsi_site_7093 iPseU_CNN:0.01348900794983;iRNA_PseU:1 7094 chr13 111164563 111164563 1 + T C rs113331483 111164573 + 111164553 111164593 41 GGAAGGGCCATTTTGGTGCTTATTCTTAACTTATTACCTCA GGAAGGGCCACTTTGGTGCTTATTCTTAACTTATTACCTCA < 41bp 1 0.629759045781004 1 0.993948817253113 experiment 0.740481908437993 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control COL4A2 ENSG00000134871 UTR3 Human protein_coding chr13:111164573 chr13:111164563 . . 0 11 hPsi_associated_SNPs_392 1 0 1 4 0 Cytosol 1 0.472954503994696 0.012102365493774 1 hPsi_site_7094 iPseU_CNN:0.012102365493774;iRNA_PseU:1 7095 chr13 114294673 114294673 1 + A G rs4150824 114294661 + 114294641 114294681 41 TTTAATGTGGGTTTTCTGTTTCCTTTTGGCCTACTCCCAAG TTTAATGTGGGTTTTCTGTTTCCTTTTGGCCTGCTCCCAAG < 41bp 1 0.314075242471106 1 0.924399137496948 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TFDP1 ENSG00000198176 UTR3 Human protein_coding chr13:114294661 chr13:114294673 . . 0 33 hPsi_associated_SNPs_394 0 0 1 0 0 Cytosol 1 0.439831495072468 0.151201725006104 1 hPsi_site_7095 iPseU_CNN:0.151201725006104;iRNA_PseU:1 7096 chr13 114294742 114294742 1 + G A rs4150826 114294761 + 114294741 114294781 41 CGTAGGATTAGGACGTGCTGTGGATGTGTGTTTTGATACCA CATAGGATTAGGACGTGCTGTGGATGTGTGTTTTGATACCA < 41bp 1 0.307856196059411 1 0.999383270740509 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TFDP1 ENSG00000198176 UTR3 Human protein_coding chr13:114294761 chr13:114294742 . . 0 2 hPsi_associated_SNPs_395 0 0 1 0 0 Cytosol 1 0.442121192179214 0.00123345851898193 1 hPsi_site_7096 iPseU_CNN:0.00123345851898193;iRNA_PseU:1 7097 chr14 21078346 21078346 1 + G A rs147322006 21078354 + 21078334 21078374 41 GTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGG GTCTCTTCGGGGACGTGGGTTCGAATCCCACCGCTGCCAGG < 41bp 1 0.549555512717408 1 0.999999761581421 experiment 0.900888974565184 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078354 chr14:21078346 . . 0 13 hPsi_associated_SNPs_397 0 0 1 0 0 unknown 1 0.469212418105973 4.7683715798108e-07 1 hPsi_site_7097 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:1 7098 chr14 21151483 21151483 1 + T G rs61976879 21151502 + 21151482 21151522 41 GTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGA GGCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGA < 41bp 1 0.618635402512416 1 0.992362380027771 experiment 0.762729194975167 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151502 chr14:21151483 . . 0 2 hPsi_associated_SNPs_400 0 0 1 0 0 unknown 1 0.71935691400111 0.015275239944458 0.561286171997779 hPsi_site_7098 iPseU_CNN:0.015275239944458;iRNA_PseU:0.561286171997779 7099 chr14 21151484 21151484 1 + C T rs115156442 21151502 + 21151482 21151522 41 GTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGA GTTATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGA < 41bp 1 0.616337213226849 1 0.999314546585083 experiment 0.767325573546302 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151502 chr14:21151484 . . 0 3 hPsi_associated_SNPs_401 0 0 1 0 0 unknown 1 0.617112743012029 0.00137090682983398 0.765774513975942 hPsi_site_7099 iPseU_CNN:0.00137090682983398;iRNA_PseU:0.765774513975942 7100 chr14 21151496 21151496 1 + G A rs547405309 21151502 + 21151482 21151522 41 GTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGA GTCATCCTTAGGTCACTGGTTCGATTCCGGCTCGAAGGAGA < 41bp 1 0.51336848658319 1 0.999906420707703 experiment 0.973263026833621 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151502 chr14:21151496 . . 0 15 hPsi_associated_SNPs_402 0 0 1 0 0 unknown 1 0.767415756548383 0.00018715858459406 0.465168486903234 hPsi_site_7100 iPseU_CNN:0.00018715858459406;iRNA_PseU:0.465168486903234 7101 chr14 21151500 21151500 1 + G T rs565990470 21151502 + 21151482 21151522 41 GTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGA GTCATCCTTAGGTCGCTGTTTCGATTCCGGCTCGAAGGAGA < 41bp 1 0.546056670389623 1 0.293357908725739 experiment 0.907886659220754 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151502 chr14:21151500 . . 0 19 hPsi_associated_SNPs_403 0 0 1 0 0 unknown 1 0.441073071378579 1 1 hPsi_site_7101 iPseU_CNN:1;iRNA_PseU:1 7102 chr14 21152235 21152235 1 + C G rs146849858 21152228 + 21152208 21152248 41 GGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTC GGGTGCGAGAGGTCCCGGGTTCAAATCGCGGACGAGCCCTC < 41bp 1 0.655638023947244 1 0.999999284744263 experiment 0.688723952105512 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152228 chr14:21152235 . . 0 28 hPsi_associated_SNPs_404 0 0 1 0 0 unknown 1 0.438933580442818 1.43051147394324e-06 1 hPsi_site_7102 iPseU_CNN:1.43051147394324e-06;iRNA_PseU:1 7103 chr14 23299135 23299135 1 + G T rs1135641 23299144 + 23299124 23299164 41 GGCTGCTTTAGGGACTGTTCTCTTCAGTGAGTGGGTATAGA GGCTGCTTTAGTGACTGTTCTCTTCAGTGAGTGGGTATAGA < 41bp 1 0.494008696482058 1 0.975384652614594 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MRPL52 ENSG00000172590 CDS Human protein_coding chr14:23299144 chr14:23299135 nonsynonymous SNV 0.000 0 12 hPsi_associated_SNPs_406 0 0 1 0 2 Ribosome 1 0.445573163175718 0.0492306947708121 1 hPsi_site_7103 iPseU_CNN:0.0492306947708121;iRNA_PseU:1 7104 chr14 23299146 23299146 1 + T C rs146757783 23299144 + 23299124 23299164 41 GGCTGCTTTAGGGACTGTTCTCTTCAGTGAGTGGGTATAGA GGCTGCTTTAGGGACTGTTCTCCTCAGTGAGTGGGTATAGA < 41bp 1 0.286668229629052 1 0.998456358909607 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MRPL52 ENSG00000172590 CDS Human protein_coding chr14:23299144 chr14:23299146 nonsynonymous SNV 0.001 0 23 hPsi_associated_SNPs_407 0 0 1 0 2 Ribosome 1 0.438718592995102 0.00308728218078591 1 hPsi_site_7104 iPseU_CNN:0.00308728218078591;iRNA_PseU:1 7105 chr14 39650438 39650438 1 + G C rs34377372 39650439 + 39650419 39650459 41 TGAGGATTTGTCATTAGCTGTTTTACAGCCAACACCCCAAG TGAGGATTTGTCATTAGCTCTTTTACAGCCAACACCCCAAG < 41bp 1 0.61866105691308 1 0.845329821109772 experiment 0.76267788617384 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PNN ENSG00000100941 CDS Human protein_coding chr14:39650439 chr14:39650438 nonsynonymous SNV 0.980 0 20 hPsi_associated_SNPs_408 0 0 1 0 0 Nucleus 1 0.438886646271128 0.309340357780456 1 hPsi_site_7105 iPseU_CNN:0.309340357780456;iRNA_PseU:1 7106 chr14 93693775 93693775 1 + C T rs117470750 93693762 + 93693742 93693782 41 TGTTGCCTTCCAGAACCTCCTCCGCAGGCATCACGGAAGGC TGTTGCCTTCCAGAACCTCCTCCGCAGGCATCATGGAAGGC < 41bp 1 0.341725146047456 1 0.897912740707397 experiment 1 Functional Loss NA| UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93693762 chr14:93693775 . . 0 34 hPsi_associated_SNPs_409 0 0 1 0 0 Ribosome 1 0.446729986173083 0.204174518585206 1 hPsi_site_7106 iPseU_CNN:0.204174518585206;iRNA_PseU:1 7107 chr14 104152396 104152396 1 + G A rs141212829 104152386 + 104152366 104152406 41 CCGCACGTGCTCCGTGGTACTTAGAGCCCTGGGGGCCCCGC CCGCACGTGCTCCGTGGTACTTAGAGCCCTAGGGGCCCCGC < 41bp 1 0.471304437446667 1 0.975447833538055 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104152386 chr14:104152396 . . 0 31 hPsi_associated_SNPs_410 0 0 1 0 0 Cytosol 1 0.51140809592568 0.04910433292389 0.97718380814864 hPsi_site_7107 iPseU_CNN:0.04910433292389;iRNA_PseU:0.97718380814864 7108 chr14 104152404 104152404 1 + C T rs150734581 104152386 + 104152366 104152406 41 CCGCACGTGCTCCGTGGTACTTAGAGCCCTGGGGGCCCCGC CCGCACGTGCTCCGTGGTACTTAGAGCCCTGGGGGCCCTGC < 41bp 1 0.362169186035165 1 0.996748507022858 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104152386 chr14:104152404 . . 0 39 hPsi_associated_SNPs_411 0 0 1 0 0 Cytosol 1 0.438829738057433 0.006502985954284 1 hPsi_site_7108 iPseU_CNN:0.006502985954284;iRNA_PseU:1 7109 chr14 104643571 104643571 1 + C T rs531517940 104643565 + 104643545 104643585 41 CACGGTCCAGCTCCCGCCTGTAGGAGCGGCGCAGCCAAGGC CACGGTCCAGCTCCCGCCTGTAGGAGTGGCGCAGCCAAGGC < 41bp 1 0.432243900830969 1 0.985924482345581 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104643565 chr14:104643571 synonymous SNV . 0 27 hPsi_associated_SNPs_412 0 0 0 0 0 Ribosome 1 0.538086090228248 0.0281510353088379 0.923827819543504 hPsi_site_7109 iPseU_CNN:0.0281510353088379;iRNA_PseU:0.923827819543504 7110 chr15 32461246 32461246 1 + A G rs55943176 32461228 + 32461208 32461248 41 AAACAGCTTGATGCTGTTTCTACATTAAAAAAAAAAAAAAA AAACAGCTTGATGCTGTTTCTACATTAAAAAAAAAAAAGAA < 41bp 1 0.632033688304059 1 0.0601197779178619 experiment 0.735932623391882 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CHRNA7 ENSG00000175344 UTR3 Human protein_coding chr15:32461228 chr15:32461246 . . 0 39 hPsi_associated_SNPs_414 0 0 0 0 0 Nucleus 1 0.870655448086488 1 0.258689103827024 hPsi_site_7110 iPseU_CNN:1;iRNA_PseU:0.258689103827024 7111 chr16 3451690 3451690 1 + C T rs186406975 3451710 + 3451690 3451730 41 CTGTGTGCTTGCTACTGAAATAAAAGAAGTATTTTTTCCCC TTGTGTGCTTGCTACTGAAATAAAAGAAGTATTTTTTCCCC < 41bp 1 0.524852960894449 1 0.944557070732117 experiment 0.950294078211102 Functional Loss NA| ZNF174 ENSG00000103343 UTR5 Human protein_coding chr16:3451710 chr16:3451690 . . 0 1 hPsi_associated_SNPs_427 0 0 1 0 0 Ribosome 1 0.689555802912686 0.110885858535766 0.620888394174628 hPsi_site_7111 iPseU_CNN:0.110885858535766;iRNA_PseU:0.620888394174628 7112 chr16 4925081 4925081 1 + T C rs148772456 4925091 + 4925071 4925111 41 CAAAGCCACATTCAGTCAGCTCTGCAGGCTCATCTTACAAG CAAAGCCACACTCAGTCAGCTCTGCAGGCTCATCTTACAAG < 41bp 1 0.586882094622314 1 0.969725370407104 experiment 0.826235810755372 Functional Loss NA| UBN1 ENSG00000118900 CDS Human protein_coding chr16:4925091 chr16:4925081 synonymous SNV . 0 11 hPsi_associated_SNPs_428 0 0 1 0 0 Ribosome 1 0.540190458225074 0.0605492591857919 0.919619083549851 hPsi_site_7112 iPseU_CNN:0.0605492591857919;iRNA_PseU:0.919619083549851 7113 chr16 4925084 4925084 1 + A C rs141506746 4925091 + 4925071 4925111 41 CAAAGCCACATTCAGTCAGCTCTGCAGGCTCATCTTACAAG CAAAGCCACATTCCGTCAGCTCTGCAGGCTCATCTTACAAG < 41bp 1 0.520744892378043 1 0.303956359624863 experiment 0.958510215243913 Functional Loss NA| UBN1 ENSG00000118900 CDS Human protein_coding chr16:4925091 chr16:4925084 synonymous SNV . 0 14 hPsi_associated_SNPs_429 0 0 1 0 0 Ribosome 1 0.438734732286679 1 1 hPsi_site_7113 iPseU_CNN:1;iRNA_PseU:1 7114 chr16 71669488 71669488 1 + C T rs540749087 71669506 + 71669486 71669526 41 AGCAACAGACCAAGACCGTATTGCCAAAATACCAAAAAAAA AGTAACAGACCAAGACCGTATTGCCAAAATACCAAAAAAAA < 41bp 1 0.483744567112133 1 0.996037244796753 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MARVELD3 ENSG00000140832 UTR3 Human protein_coding chr16:71669506 chr16:71669488 . . 0 3 hPsi_associated_SNPs_432 0 0 0 0 0 Ribosome 1 0.448640521571687 0.00792551040649392 1 hPsi_site_7114 iPseU_CNN:0.00792551040649392;iRNA_PseU:1 7115 chr16 71962081 71962081 1 + C T rs181597687 71962086 + 71962066 71962106 41 CAGTGGGAGAGAGCACGTTGTGAAGCATCCCAGCCTCGTGT CAGTGGGAGAGAGCATGTTGTGAAGCATCCCAGCCTCGTGT < 41bp 1 0.338903837942814 1 0.997831463813782 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock IST1 ENSG00000182149 UTR3 Human protein_coding chr16:71962086 chr16:71962081 . . 0 16 hPsi_associated_SNPs_433 0 0 1 0 0 Ribosome 1 0.987490944848765 0.00433707237243608 0.0250181103024696 hPsi_site_7115 iPseU_CNN:0.00433707237243608;iRNA_PseU:0.0250181103024696 7116 chr16 71962103 71962103 1 + G A rs138263078 71962086 + 71962066 71962106 41 CAGTGGGAGAGAGCACGTTGTGAAGCATCCCAGCCTCGTGT CAGTGGGAGAGAGCACGTTGTGAAGCATCCCAGCCTCATGT < 41bp 1 0.29441879779752 1 0.997385144233704 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock IST1 ENSG00000182149 UTR3 Human protein_coding chr16:71962086 chr16:71962103 . . 0 38 hPsi_associated_SNPs_434 0 0 1 0 0 Ribosome 1 0.992415612245942 0.00522971153259211 0.0151687755081165 hPsi_site_7116 iPseU_CNN:0.00522971153259211;iRNA_PseU:0.0151687755081165 7117 chr16 88804778 88804778 1 + G A rs562175631 88804792 - 88804772 88804812 41 TGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCCTGCCAC TGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCTTGCCAC < 41bp 1 0.194569331095432 1 0.998585104942322 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804792 chr16:88804778 synonymous SNV . 0 35 hPsi_associated_SNPs_435 0 0 1 0 1 Endoplasmic reticulum 1 0.438718592912422 0.002829790115356 1 hPsi_site_7117 iPseU_CNN:0.002829790115356;iRNA_PseU:1 7118 chr16 88923547 88923547 1 + G A rs201682947 88923566 + 88923546 88923586 41 CGAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGATTGCCA CAAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGATTGCCA < 41bp 1 0.399101153512929 1 0.996582567691803 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC2L ENSG00000167515 UTR5 Human protein_coding chr16:88923566 chr16:88923547 . . 0 2 hPsi_associated_SNPs_436 0 0 1 0 1 Ribosome 1 0.449669265338928 0.00683486461639404 1 hPsi_site_7118 iPseU_CNN:0.00683486461639404;iRNA_PseU:1 7119 chr16 88923565 88923565 1 + G A rs535526526 88923566 + 88923546 88923586 41 CGAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGATTGCCA CGAGCCTCCCAAGATGGCGATGTGCATCGCGGTGATTGCCA < 41bp 1 0.356636654499358 1 0.998513460159302 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88923566 chr16:88923565 nonsynonymous SNV 0.996 3 20 hPsi_associated_SNPs_437 0 0 1 0 1 Ribosome 1 0.43872349469024 0.00297307968139604 1 hPsi_site_7119 iPseU_CNN:0.00297307968139604;iRNA_PseU:1 7120 chr17 2278920 2278920 1 + C A rs113308954 2278919 + 2278899 2278939 41 GCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGAC GCAGCAGCATTCCGTGGAGTTAGACTCTCCAGACTCAGGAC < 41bp 1 0.69888871228216 1 0.999994039535522 experiment 0.60222257543568 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278919 chr17:2278920 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_438 0 0 1 0 0 Cytosol 1 0.438907912646823 1.19209289559663e-05 1 hPsi_site_7120 iPseU_CNN:1.19209289559663e-05;iRNA_PseU:1 7121 chr17 7319325 7319325 1 + C T rs76733190 7319308 + 7319288 7319328 41 CGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG CGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCTATG < 41bp 1 0.302964340048564 1 0.9998539686203 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7319308 chr17:7319325 synonymous SNV . 0 38 hPsi_associated_SNPs_439 0 0 0 0 0 chromatin 1 0.490053976039944 0.00029206275940008 1 hPsi_site_7121 iPseU_CNN:0.00029206275940008;iRNA_PseU:1 7122 chr17 7346432 7346432 1 + C A rs201355356 7346428 + 7346408 7346448 41 GGAGCCTTCTCTCCACAGTGTCCCCGAGGCCTCCCCTTCCA GGAGCCTTCTCTCCACAGTGTCCCAGAGGCCTCCCCTTCCA < 41bp 1 0.348515647659501 1 0.981290817260742 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FGF11 ENSG00000161958 CDS Human protein_coding chr17:7346428 chr17:7346432 synonymous SNV . 0 25 hPsi_associated_SNPs_440 0 0 0 0 1 exosome 1 0.43871859026714 0.0374183654785161 1 hPsi_site_7122 iPseU_CNN:0.0374183654785161;iRNA_PseU:1 7123 chr17 14110967 14110967 1 + G C rs146848128 14110951 + 14110931 14110971 41 GCCTCATGATCTGCTGTCTGTAGTTCTGTGAGCTCAGGTCC GCCTCATGATCTGCTGTCTGTAGTTCTGTGAGCTCACGTCC < 41bp 1 0.382292021006674 1 0.999993622303009 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14110951 chr17:14110967 . . 0 37 hPsi_associated_SNPs_441 0 0 1 0 0 Cytosol 1 0.469447851613555 1.27553939819336e-05 1 hPsi_site_7123 iPseU_CNN:1.27553939819336e-05;iRNA_PseU:1 7124 chr17 14110968 14110968 1 + G C rs75823746 14110951 + 14110931 14110971 41 GCCTCATGATCTGCTGTCTGTAGTTCTGTGAGCTCAGGTCC GCCTCATGATCTGCTGTCTGTAGTTCTGTGAGCTCAGCTCC < 41bp 1 0.387638213899094 1 0.999985933303833 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14110951 chr17:14110968 . . 0 38 hPsi_associated_SNPs_442 2 0 1 0 0 Cytosol 1 0.476120883935106 2.81333923339844e-05 1 hPsi_site_7124 iPseU_CNN:2.81333923339844e-05;iRNA_PseU:1 7125 chr17 16342343 16342343 1 + G A rs117030628 16342354 + 16342334 16342374 41 CGCACATAAGGTGTGACCTTTTCATTCCCGTTGTTATGGAG CGCACATAAAGTGTGACCTTTTCATTCCCGTTGTTATGGAG < 41bp 1 0.510833035518744 1 0.996096730232239 experiment 0.978333928962512 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342354 chr17:16342343 . . 0 10 hPsi_associated_SNPs_443 0 0 1 1 2 Nucleus 1 0.626398150211833 0.00780653953552202 0.747203699576333 hPsi_site_7125 iPseU_CNN:0.00780653953552202;iRNA_PseU:0.747203699576333 7126 chr17 16342369 16342369 1 + A T rs554769527 16342354 + 16342334 16342374 41 CGCACATAAGGTGTGACCTTTTCATTCCCGTTGTTATGGAG CGCACATAAGGTGTGACCTTTTCATTCCCGTTGTTTTGGAG < 41bp 1 0.565195436185341 1 0.991728663444519 experiment 0.869609127629319 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342354 chr17:16342369 . . 0 36 hPsi_associated_SNPs_444 0 0 1 1 1 Nucleus 1 0.438718593677053 0.0165426731109619 1 hPsi_site_7126 iPseU_CNN:0.0165426731109619;iRNA_PseU:1 7127 chr17 17088676 17088676 1 + C T rs56247606 17088686 + 17088666 17088706 41 AGCACTGACTCCTCACCCGCTAGTCTGGCTGTTAAGAGGAG AGCACTGACTTCTCACCCGCTAGTCTGGCTGTTAAGAGGAG < 41bp 1 0.405459154671014 1 0.990114450454712 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MPRIP ENSG00000263624 ncRNA_intronic Human antisense chr17:17088686 chr17:17088676 . . 0 11 hPsi_associated_SNPs_445 0 0 0 0 0 Cytosol 1 0.447349209343294 0.0197710990905759 1 hPsi_site_7127 iPseU_CNN:0.0197710990905759;iRNA_PseU:1 7128 chr17 18010808 18010808 1 + C A rs79819956 18010794 + 18010774 18010814 41 TCATGGGGGTTTTGAGTTTGTAGTGCTGAGCCTGCATCTGT TCATGGGGGTTTTGAGTTTGTAGTGCTGAGCCTGAATCTGT < 41bp 1 0.0949874636351769 1 0.985658645629883 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DRG2 ENSG00000108591 UTR3 Human protein_coding chr17:18010794 chr17:18010808 . . 0 35 hPsi_associated_SNPs_446 0 0 1 0 0 Cytosol 1 0.581346021368931 0.0286827087402339 0.837307957262138 hPsi_site_7128 iPseU_CNN:0.0286827087402339;iRNA_PseU:0.837307957262138 7129 chr17 22022759 22022759 1 + C A rs56270535 22022752 + 22022732 22022772 41 ATAGGTAGAGGTGACAAGCCTACCGAGCCTGGTGATAGCTG ATAGGTAGAGGTGACAAGCCTACCGAGACTGGTGATAGCTG < 41bp 1 0.383439287642308 1 0.959574162960052 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MTRNR2L1 ENSG00000256618 UTR5 Human protein_coding chr17:22022752 chr17:22022759 . . 0 28 hPsi_associated_SNPs_447 0 0 1 0 0 Cytosol 1 0.439217493021141 0.0808516740798959 1 hPsi_site_7129 iPseU_CNN:0.0808516740798959;iRNA_PseU:1 7130 chr17 25639541 25639541 1 + G A rs9867 25639558 + 25639538 25639578 41 TGAGCTTTTAAAATATTATTTATAGACAATAGAAGTATTTC TGAACTTTTAAAATATTATTTATAGACAATAGAAGTATTTC < 41bp 1 0.598571700408074 1 0.247554749250412 experiment 0.802856599183853 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25639558 chr17:25639541 . . 0 4 hPsi_associated_SNPs_448 0 0 1 8 0 Cytosol 1 0.496571437992806 1 1 hPsi_site_7130 iPseU_CNN:1;iRNA_PseU:1 7131 chr17 27011720 27011720 1 + C T rs181745582 27011710 + 27011690 27011730 41 CGAGAACCAAGGGAAGGGCATTCGAGTCCTCGGCATTGCTT CGAGAACCAAGGGAAGGGCATTCGAGTCCTTGGCATTGCTT < 41bp 1 0.472819724709033 1 0.118421643972397 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011710 chr17:27011720 synonymous SNV . 0 31 hPsi_associated_SNPs_449 0 0 1 0 1 Cytosol 1 0.438718592995102 1 1 hPsi_site_7131 iPseU_CNN:1;iRNA_PseU:1 7132 chr17 27899506 27899506 1 + C T rs369410877 27899496 + 27899476 27899516 41 GCCCAGGGGGCTGTGTCTGTTCAAGTCAGGCTTCCCCGGCC GCCCAGGGGGCTGTGTCTGTTCAAGTCAGGTTTCCCCGGCC < 41bp 1 0.688354520766952 1 0.99999213218689 experiment 0.623290958466096 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TP53I13 ENSG00000167543 CDS Human protein_coding chr17:27899496 chr17:27899506 nonsynonymous SNV 0.109 0 31 hPsi_associated_SNPs_450 0 0 1 0 0 chromatin 1 0.51731896730018 1.5735626220037e-05 0.965362065399639 hPsi_site_7132 iPseU_CNN:1.5735626220037e-05;iRNA_PseU:0.965362065399639 7133 chr17 37815304 37815304 1 + G C rs11556624 37815318 + 37815298 37815338 41 CTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGG CTGCAGCGTCTGACAATGAATCAGATGAAGAAGTTGCTGGG < 41bp 1 0.120851956891299 1 0.924934923648834 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815318 chr17:37815304 nonsynonymous SNV 0.990 5 7 hPsi_associated_SNPs_452 0 0 1 1 2 Ribosome 1 0.518021035475751 0.150130152702332 0.963957929048498 hPsi_site_7133 iPseU_CNN:0.150130152702332;iRNA_PseU:0.963957929048498 7134 chr17 38451656 38451656 1 + C T rs143357695 38451643 + 38451623 38451663 41 GTTCTGGACAATGCTGCAGTTCAATTCTGTGCCCGCAAAGT GTTCTGGACAATGCTGCAGTTCAATTCTGTGCCTGCAAAGT < 41bp 1 0.412055896439305 1 0.999887704849243 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CDC6 ENSG00000094804 CDS Human protein_coding chr17:38451643 chr17:38451656 nonsynonymous SNV 1.000 4 34 hPsi_associated_SNPs_453 0 0 1 0 2 Nucleus 1 0.617011416951984 0.000224590301513894 0.765977166096032 hPsi_site_7134 iPseU_CNN:0.000224590301513894;iRNA_PseU:0.765977166096032 7135 chr17 38451657 38451657 1 + G A rs4135016 38451643 + 38451623 38451663 41 GTTCTGGACAATGCTGCAGTTCAATTCTGTGCCCGCAAAGT GTTCTGGACAATGCTGCAGTTCAATTCTGTGCCCACAAAGT < 41bp 1 0.569628935606202 1 0.999946594238281 experiment 0.860742128787596 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CDC6 ENSG00000094804 CDS Human protein_coding chr17:38451643 chr17:38451657 nonsynonymous SNV 1.000 4 35 hPsi_associated_SNPs_454 0 0 1 0 2 Nucleus 1 0.617050016585019 0.000106811523437944 0.765899966829962 hPsi_site_7135 iPseU_CNN:0.000106811523437944;iRNA_PseU:0.765899966829962 7136 chr17 66528427 66528427 1 + G T rs201999343 66528408 + 66528388 66528428 41 TGATTTGATCTTTGTTTAAATGCCAAAATGTACTTAAATGA TGATTTGATCTTTGTTTAAATGCCAAAATGTACTTAAATTA < 41bp 1 0.0714627255797945 1 0.997563540935516 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66528408 chr17:66528427 . . 0 40 hPsi_associated_SNPs_456 2 0 1 3 0 Ribosome 1 0.437400006717157 0.00487291812896795 1 hPsi_site_7136 iPseU_CNN:0.00487291812896795;iRNA_PseU:1 7137 chr17 74740465 74740465 1 + A G rs77026620 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGGGGACAGTTCTGTTCTTTCTCATTCGGAA < 41bp 1 0.554940135125098 1 0.999974310398102 experiment 0.890119729749803 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740465 synonymous SNV . 0 24 hPsi_associated_SNPs_457 0 0 1 0 2 Endoplasmic reticulum 1 0.758479037898617 5.13792037959426e-05 0.483041924202766 hPsi_site_7137 iPseU_CNN:5.13792037959426e-05;iRNA_PseU:0.483041924202766 7138 chr17 74740479 74740479 1 + G A rs376134707 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCAGAA < 41bp 1 0.534694804851311 1 0.999993085861206 experiment 0.930610390297379 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740479 nonsynonymous SNV 1.000 2 38 hPsi_associated_SNPs_458 0 0 1 0 2 Endoplasmic reticulum 1 0.437672490050349 1.38282775878906e-05 1 hPsi_site_7138 iPseU_CNN:1.38282775878906e-05;iRNA_PseU:1 7139 chr17 78079643 78079643 1 + C A rs1800301 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCAG < 41bp 1 0.129238577696376 1 0.964924812316895 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079643 synonymous SNV . 0 40 hPsi_associated_SNPs_459 0 0 1 0 2 Endoplasmic reticulum 1 0.465557449595849 0.07015037536621 1 hPsi_site_7139 iPseU_CNN:0.07015037536621;iRNA_PseU:1 7140 chr18 8639126 8639126 1 + A G rs568273585 8639144 + 8639124 8639164 41 TGATTAAGCCTAGACTGTGTTCTTTTTTTTTTTTTTTTTTT TGGTTAAGCCTAGACTGTGTTCTTTTTTTTTTTTTTTTTTT < 41bp 1 0.312308435399661 1 0.990985631942749 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RAB12 ENSG00000206418 UTR3 Human protein_coding chr18:8639144 chr18:8639126 . . 0 3 hPsi_associated_SNPs_460 0 0 1 0 0 Ribosome 1 0.96835585622892 0.018028736114502 0.0632882875421592 hPsi_site_7140 iPseU_CNN:0.018028736114502;iRNA_PseU:0.0632882875421592 7141 chr18 77894570 77894570 1 + T C rs377568169 77894552 + 77894532 77894572 41 ACCTGTTGGGCCTGGTGTTCTTCCTGTGAGCCCCTCTGTCA ACCTGTTGGGCCTGGTGTTCTTCCTGTGAGCCCCTCTGCCA < 41bp 1 0.322968554273658 1 0.96389102935791 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894552 chr18:77894570 nonsynonymous SNV 0.485 2 39 hPsi_associated_SNPs_461 0 0 1 0 0 Cytosol 1 0.839436740219408 0.0722179412841799 0.321126519561183 hPsi_site_7141 iPseU_CNN:0.0722179412841799;iRNA_PseU:0.321126519561183 7142 chr19 893500 893500 1 + C A rs142199789 893514 + 893494 893534 41 CGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGAT CGGCAGAACATATACTAAAATTGGAACGATACAGAGAAGAT < 41bp 1 0.169769689965121 1 0.999961256980896 experiment 1 Functional Loss NA| RNU6-2 ENSG00000207507 ncRNA_exonic Human snRNA chr19:893514 chr19:893500 . . 0 7 hPsi_associated_SNPs_462 0 0 1 0 0 unknown 1 0.728044554485335 7.74860382080078e-05 0.543910891029331 hPsi_site_7142 iPseU_CNN:7.74860382080078e-05;iRNA_PseU:0.543910891029331 7143 chr19 893503 893503 1 + A G rs146316247 893514 + 893494 893534 41 CGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGAT CGGCAGCACGTATACTAAAATTGGAACGATACAGAGAAGAT < 41bp 1 0.602213815584881 1 0.999997854232788 experiment 0.795572368830239 Functional Loss NA| RNU6-2 ENSG00000207507 ncRNA_exonic Human snRNA chr19:893514 chr19:893503 . . 0 10 hPsi_associated_SNPs_463 0 0 1 0 0 unknown 1 0.471214047086756 4.29153442405017e-06 1 hPsi_site_7143 iPseU_CNN:4.29153442405017e-06;iRNA_PseU:1 7144 chr19 893586 893586 1 + T A rs78469799 893569 + 893549 893589 41 CGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATATTTT CGCAAGGATGACACGCAAATTCGTGAAGCGTTCCATAATTT < 41bp 1 0.0639789711266988 1 0.998672604560852 experiment 1 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control RNU6-2 ENSG00000207507 ncRNA_exonic Human snRNA chr19:893569 chr19:893586 . . 0 38 hPsi_associated_SNPs_465 0 0 1 0 0 unknown 1 0.438556309408018 0.0026547908782959 1 hPsi_site_7144 iPseU_CNN:0.0026547908782959;iRNA_PseU:1 7145 chr19 1378347 1378347 1 + C T rs77009039 1378342 + 1378322 1378362 41 ACGCGCCCCTGATGGAACTTTTCTGCTGTTGTGAAGTACTT ACGCGCCCCTGATGGAACTTTTCTGTTGTTGTGAAGTACTT < 41bp 1 0.225653892806091 1 0.990933656692505 experiment 1 Functional Loss NA| MUM1 ENSG00000160953 UTR3 Human protein_coding chr19:1378342 chr19:1378347 . . 0 26 hPsi_associated_SNPs_466 0 0 1 0 0 Cytosol 1 0.545670994785705 0.01813268661499 0.90865801042859 hPsi_site_7145 iPseU_CNN:0.01813268661499;iRNA_PseU:0.90865801042859 7146 chr19 1383570 1383570 1 + G A rs576494027 1383590 + 1383570 1383610 41 GGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTT AGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTT < 41bp 1 0.442504291617003 1 0.999999046325684 experiment 1 Functional Loss NA| NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383590 chr19:1383570 . . 0 1 hPsi_associated_SNPs_468 0 0 1 0 1 chromatin 1 0.438736269051442 1.90734863192432e-06 1 hPsi_site_7146 iPseU_CNN:1.90734863192432e-06;iRNA_PseU:1 7147 chr19 1383578 1383578 1 + C A rs559354209 1383589 + 1383569 1383609 41 TGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGT TGGCGCAATAGGTTAGCGCGTTCGGCTGTTAACCGAAAGGT < 41bp 1 0.595451662497032 1 0.999999821186066 experiment 0.809096675005937 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383589 chr19:1383578 . . 0 10 hPsi_associated_SNPs_469 0 0 1 0 1 chromatin 1 0.438721302266496 3.5762786798621e-07 1 hPsi_site_7147 iPseU_CNN:3.5762786798621e-07;iRNA_PseU:1 7148 chr19 1383578 1383578 1 + C A rs559354209 1383590 + 1383570 1383610 41 GGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTT GGCGCAATAGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTT < 41bp 1 0.548415260581998 1 0.999625861644745 experiment 0.903169478836004 Functional Loss NA| NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383590 chr19:1383578 . . 0 9 hPsi_associated_SNPs_470 0 0 1 0 1 chromatin 1 0.439154937325879 0.000748276710510032 1 hPsi_site_7148 iPseU_CNN:0.000748276710510032;iRNA_PseU:1 7149 chr19 1383582 1383582 1 + T G rs138144610 1383590 + 1383570 1383610 41 GGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTT GGCGCAATCGGTGAGCGCGTTCGGCTGTTAACCGAAAGGTT < 41bp 1 0.562887959067136 1 0.999595701694489 experiment 0.874224081865728 Functional Loss NA| NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383590 chr19:1383582 . . 0 13 hPsi_associated_SNPs_471 0 0 1 0 1 chromatin 1 0.438969179070536 0.000808596611022061 1 hPsi_site_7149 iPseU_CNN:0.000808596611022061;iRNA_PseU:1 7150 chr19 1383591 1383591 1 + C G rs561309612 1383589 + 1383569 1383609 41 TGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGT TGGCGCAATCGGTTAGCGCGTTGGGCTGTTAACCGAAAGGT < 41bp 1 0.641254988724123 1 0.99988728761673 experiment 0.717490022551755 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383589 chr19:1383591 . . 0 23 hPsi_associated_SNPs_472 0 0 1 0 1 chromatin 1 0.439240957923982 0.000225424766540083 1 hPsi_site_7150 iPseU_CNN:0.000225424766540083;iRNA_PseU:1 7151 chr19 1383591 1383591 1 + C G rs561309612 1383590 + 1383570 1383610 41 GGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTT GGCGCAATCGGTTAGCGCGTTGGGCTGTTAACCGAAAGGTT < 41bp 1 0.510929724995929 1 0.999976277351379 experiment 0.978140550008141 Functional Loss NA| NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383590 chr19:1383591 . . 0 22 hPsi_associated_SNPs_473 0 0 1 0 1 chromatin 1 0.438655931343497 4.74452972420991e-05 1 hPsi_site_7151 iPseU_CNN:4.74452972420991e-05;iRNA_PseU:1 7152 chr19 3193323 3193323 1 + C A rs137943426 3193339 + 3193319 3193359 41 AGACCGCCGTCCCCGTGTACTTTGCCGTGGAGGACGAGGCC AGACAGCCGTCCCCGTGTACTTTGCCGTGGAGGACGAGGCC < 41bp 1 0.698722553528485 1 0.999572098255157 experiment 0.60255489294303 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3193339 chr19:3193323 synonymous SNV . 0 5 hPsi_associated_SNPs_474 0 0 1 0 1 Ribosome 1 0.439250572335808 0.000855803489685947 1 hPsi_site_7152 iPseU_CNN:0.000855803489685947;iRNA_PseU:1 7153 chr19 3193327 3193327 1 + G A rs117922207 3193339 + 3193319 3193359 41 AGACCGCCGTCCCCGTGTACTTTGCCGTGGAGGACGAGGCC AGACCGCCATCCCCGTGTACTTTGCCGTGGAGGACGAGGCC < 41bp 1 0.659294029134094 1 0.999803006649017 experiment 0.681411941731812 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3193339 chr19:3193327 nonsynonymous SNV 0.808 1 9 hPsi_associated_SNPs_475 0 0 1 0 2 Ribosome 1 0.940689956063048 0.000393986701965998 0.118620087873905 hPsi_site_7153 iPseU_CNN:0.000393986701965998;iRNA_PseU:0.118620087873905 7154 chr19 3193332 3193332 1 + C G rs191884070 3193339 + 3193319 3193359 41 AGACCGCCGTCCCCGTGTACTTTGCCGTGGAGGACGAGGCC AGACCGCCGTCCCGGTGTACTTTGCCGTGGAGGACGAGGCC < 41bp 1 0.46446537320778 1 0.97305691242218 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3193339 chr19:3193332 synonymous SNV . 0 14 hPsi_associated_SNPs_476 0 0 1 0 2 Ribosome 1 0.43996333827284 0.0538861751556401 1 hPsi_site_7154 iPseU_CNN:0.0538861751556401;iRNA_PseU:1 7155 chr19 3762698 3762698 1 + C A rs13960 3762693 + 3762673 3762713 41 CACTTGCAAGCTGCCCGCAATACGTCATGGCGACCAAACGC CACTTGCAAGCTGCCCGCAATACGTAATGGCGACCAAACGC < 41bp 1 0.591030517463733 1 0.888715744018555 experiment 0.817938965072534 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MIR1268A ENSG00000183617 UTR5 Human protein_coding chr19:3762693 chr19:3762698 . . 0 26 hPsi_associated_SNPs_477 0 0 0 0 0 unknown 1 0.877129940263906 0.22256851196289 0.245740119472189 hPsi_site_7155 iPseU_CNN:0.22256851196289;iRNA_PseU:0.245740119472189 7156 chr19 3762708 3762708 1 + A C rs200937941 3762693 + 3762673 3762713 41 CACTTGCAAGCTGCCCGCAATACGTCATGGCGACCAAACGC CACTTGCAAGCTGCCCGCAATACGTCATGGCGACCCAACGC < 41bp 1 0.652907324750291 1 0.998551607131958 experiment 0.694185350499418 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762693 chr19:3762708 nonsynonymous SNV 0.026 0 36 hPsi_associated_SNPs_478 0 0 1 0 0 Ribosome 1 0.508410666068028 0.00289678573608398 0.983178667863944 hPsi_site_7156 iPseU_CNN:0.00289678573608398;iRNA_PseU:0.983178667863944 7157 chr19 10942108 10942108 1 + C T rs78160240 10942127 + 10942107 10942147 41 GCGCCTACATCCCCAGGCCTTGCTGGGGTGCAGGGGTATAT GTGCCTACATCCCCAGGCCTTGCTGGGGTGCAGGGGTATAT < 41bp 1 0.223246906143059 1 0.0502496063709259 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942127 chr19:10942108 . . 0 2 hPsi_associated_SNPs_481 2 0 1 0 1 Nucleus 1 0.670005086583547 1 0.659989826832907 hPsi_site_7157 iPseU_CNN:1;iRNA_PseU:0.659989826832907 7158 chr19 10942109 10942109 1 + G A rs74952080 10942127 + 10942107 10942147 41 GCGCCTACATCCCCAGGCCTTGCTGGGGTGCAGGGGTATAT GCACCTACATCCCCAGGCCTTGCTGGGGTGCAGGGGTATAT < 41bp 1 0.246750573155264 1 0.0692416429519653 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942127 chr19:10942109 . . 0 3 hPsi_associated_SNPs_482 0 0 1 0 1 Nucleus 1 0.691802068260588 1 0.616395863478824 hPsi_site_7158 iPseU_CNN:1;iRNA_PseU:0.616395863478824 7159 chr19 11486732 11486732 1 + A G rs202118780 11486745 + 11486725 11486765 41 GTTTCCCATGGCTGGAATACTTACCTCAGGGACATATGCAG GTTTCCCGTGGCTGGAATACTTACCTCAGGGACATATGCAG < 41bp 1 0.542752287731175 1 0.909109234809875 experiment 0.914495424537649 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SWSAP1 ENSG00000173928 UTR3 Human protein_coding chr19:11486745 chr19:11486732 . . 0 8 hPsi_associated_SNPs_483 0 0 0 2 0 exosome 1 0.440668489617855 0.18178153038025 1 hPsi_site_7159 iPseU_CNN:0.18178153038025;iRNA_PseU:1 7160 chr19 13249223 13249223 1 + C T rs45554531 13249213 + 13249193 13249233 41 GGGTCCCTCGGCTGAAGCCCTGCAGTAACCCGCCCAGCCTC GGGTCCCTCGGCTGAAGCCCTGCAGTAACCTGCCCAGCCTC < 41bp 1 0.170288067806374 1 0.957206428050995 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NACC1 ENSG00000160877 UTR3 Human protein_coding chr19:13249213 chr19:13249223 . . 0 31 hPsi_associated_SNPs_486 0 0 1 0 0 Ribosome 1 0.438475672070308 0.08558714389801 1 hPsi_site_7160 iPseU_CNN:0.08558714389801;iRNA_PseU:1 7161 chr19 14561832 14561832 1 + C T rs140044731 14561814 + 14561794 14561834 41 CCACCCCAAGGGGCGGCTGCTGCGAGAAGAGCTCGCTGCGG CCACCCCAAGGGGCGGCTGCTGCGAGAAGAGCTCGCTGTGG < 41bp 1 0.0732366571017091 1 0.9944988489151 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561814 chr19:14561832 nonsynonymous SNV 0.100 0 39 hPsi_associated_SNPs_487 0 0 1 0 1 Ribosome 1 0.785834346395992 0.0110023021698 0.428331307208015 hPsi_site_7161 iPseU_CNN:0.0110023021698;iRNA_PseU:0.428331307208015 7162 chr19 16338417 16338417 1 + A G rs560386574 16338424 + 16338404 16338444 41 AGTGTGTGCGGCTATCACGCTTCGAGAATGACCGCACCATC AGTGTGTGCGGCTGTCACGCTTCGAGAATGACCGCACCATC < 41bp 1 0.256763235367424 1 0.999748587608337 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338424 chr19:16338417 synonymous SNV . 0 14 hPsi_associated_SNPs_488 0 0 1 0 2 Ribosome 1 0.565388932298954 0.000502824783326083 0.869222135402092 hPsi_site_7162 iPseU_CNN:0.000502824783326083;iRNA_PseU:0.869222135402092 7163 chr19 32874899 32874899 1 + C T rs28638285 32874915 + 32874895 32874935 41 CATCCGGCATTGGAAATAGTTTGAACTATTTCCAAAAATCC CATCTGGCATTGGAAATAGTTTGAACTATTTCCAAAAATCC < 41bp 1 0.349377658394436 1 0.996486186981201 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF507 ENSG00000168813 UTR3 Human protein_coding chr19:32874915 chr19:32874899 . . 0 5 hPsi_associated_SNPs_489 0 0 1 0 0 Cytosol 1 0.491187728266099 0.0070276260375981 1 hPsi_site_7163 iPseU_CNN:0.0070276260375981;iRNA_PseU:1 7164 chr19 34305454 34305454 1 + T G rs576147801 34305472 + 34305452 34305492 41 TTTGGGATTTTCTCTCTCACTATTCTTTGGTTGGGGATGAT TTGGGGATTTTCTCTCTCACTATTCTTTGGTTGGGGATGAT < 41bp 1 0.203471656096839 1 0.954296112060547 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34305472 chr19:34305454 . . 0 3 hPsi_associated_SNPs_490 0 0 1 0 0 Cytosol 1 0.440932897363833 0.091407775878906 1 hPsi_site_7164 iPseU_CNN:0.091407775878906;iRNA_PseU:1 7165 chr19 36220996 36220996 1 + C T rs139082238 36220991 + 36220971 36221011 41 TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT TCCAGGATGACAAGAAAGTCTTCTGTCAGAAACACACTGAT < 41bp 1 0.232076282868464 1 0.288968741893768 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36220991 chr19:36220996 synonymous SNV . 0 26 hPsi_associated_SNPs_491 0 0 1 0 1 chromatin 1 0.441289167245938 1 1 hPsi_site_7165 iPseU_CNN:1;iRNA_PseU:1 7166 chr19 39390819 39390819 1 + C T rs140517797 39390823 + 39390803 39390843 41 TGTCGTGGGCTCCCCTCGTCTTCGGCTACGTCACTGAGGAT TGTCGTGGGCTCCCCTTGTCTTCGGCTACGTCACTGAGGAT < 41bp 1 0.17680312262557 1 0.95544958114624 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39390823 chr19:39390819 nonsynonymous SNV . 0 17 hPsi_associated_SNPs_492 0 0 1 0 1 Ribosome 1 0.438858911047165 0.08910083770752 1 hPsi_site_7166 iPseU_CNN:0.08910083770752;iRNA_PseU:1 7167 chr19 39915071 39915071 1 + C T rs146135931 39915084 + 39915064 39915104 41 GCCATGTCACCTCCCAGACCTTCAGATTCCAGGTACCTCAC GCCATGTTACCTCCCAGACCTTCAGATTCCAGGTACCTCAC < 41bp 1 0.23977677712923 1 0.991421341896057 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915084 chr19:39915071 nonsynonymous SNV 0.000 0 8 hPsi_associated_SNPs_493 0 0 0 0 0 Nucleus 1 0.438718660984702 0.017157316207886 1 hPsi_site_7167 iPseU_CNN:0.017157316207886;iRNA_PseU:1 7168 chr19 39998147 39998147 1 + C T rs191149379 39998129 + 39998109 39998149 41 TGCGCTCTTGCTGGTCCACGTGCGCCGCCGTGGCCACTCCC TGCGCTCTTGCTGGTCCACGTGCGCCGCCGTGGCCACTTCC < 41bp 1 0.110068739623098 1 0.978947877883911 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DLL3 ENSG00000090932 CDS Human protein_coding chr19:39998129 chr19:39998147 nonsynonymous SNV 0.003 1 39 hPsi_associated_SNPs_494 3 0 1 0 0 exosome 1 0.438717795220083 0.042104244232178 1 hPsi_site_7168 iPseU_CNN:0.042104244232178;iRNA_PseU:1 7169 chr19 40883933 40883933 1 + G A rs4819 40883947 + 40883927 40883967 41 GACGGCGGGCACCTCGCTGCTGGTGACGCAGAATGGGAGGG GACGGCAGGCACCTCGCTGCTGGTGACGCAGAATGGGAGGG < 41bp 1 0.0552986122236548 1 0.724378347396851 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883947 chr19:40883933 synonymous SNV . 0 7 hPsi_associated_SNPs_495 1 0 1 0 1 Endoplasmic reticulum 1 0.438718995595444 0.551243305206298 1 hPsi_site_7169 iPseU_CNN:0.551243305206298;iRNA_PseU:1 7170 chr19 42799571 42799571 1 + A G rs182118380 42799570 + 42799550 42799590 41 CTCCCTCCTCCAAGCCCCTGTACATAACCTGGAGCGTGTGA CTCCCTCCTCCAAGCCCCTGTGCATAACCTGGAGCGTGTGA < 41bp 1 0.085920650410654 1 0.00509381294250488 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CIC ENSG00000079432 UTR3 Human protein_coding chr19:42799570 chr19:42799571 . . 0 22 hPsi_associated_SNPs_496 0 0 1 1 0 Cytosol 1 0.451290619078729 1 1 hPsi_site_7170 iPseU_CNN:1;iRNA_PseU:1 7171 chr19 46030154 46030154 1 + G A rs10995 46030168 + 46030148 46030188 41 AAAGGAGAAGGGGAGGAAACTTCTCCCCTCCCACCTTCACC AAAGGAAAAGGGGAGGAAACTTCTCCCCTCCCACCTTCACC < 41bp 1 0.45971789581573 1 0.974157512187958 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock VASP ENSG00000125753 UTR3 Human protein_coding chr19:46030168 chr19:46030154 . . 0 7 hPsi_associated_SNPs_497 0 0 1 0 0 Ribosome 1 0.438718548281052 0.051684975624084 1 hPsi_site_7171 iPseU_CNN:0.051684975624084;iRNA_PseU:1 7172 chr19 49375671 49375671 1 + G A rs113445675 49375685 + 49375665 49375705 41 CATTGTGTTCGTTGCTCTTATCGGTTCCCATCCCAGTTGTT CATTGTATTCGTTGCTCTTATCGGTTCCCATCCCAGTTGTT < 41bp 1 0.259572701886168 1 0.995782494544983 experiment 1 Functional Loss NA| PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375685 chr19:49375671 . . 0 7 hPsi_associated_SNPs_498 0 0 0 0 0 Cytosol 1 0.911952940543958 0.00843501091003396 0.176094118912084 hPsi_site_7172 iPseU_CNN:0.00843501091003396;iRNA_PseU:0.176094118912084 7173 chr19 49375676 49375676 1 + T C rs638050 49375685 + 49375665 49375705 41 CATTGTGTTCGTTGCTCTTATCGGTTCCCATCCCAGTTGTT CATTGTGTTCGCTGCTCTTATCGGTTCCCATCCCAGTTGTT < 41bp 1 0.121711314353773 1 0.999948382377625 experiment 1 Functional Loss NA| PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375685 chr19:49375676 . . 0 12 hPsi_associated_SNPs_499 0 0 0 0 0 Cytosol 1 0.466219097569876 0.000103235244750088 1 hPsi_site_7173 iPseU_CNN:0.000103235244750088;iRNA_PseU:1 7174 chr19 49375681 49375681 1 + C T rs190969435 49375685 + 49375665 49375705 41 CATTGTGTTCGTTGCTCTTATCGGTTCCCATCCCAGTTGTT CATTGTGTTCGTTGCTTTTATCGGTTCCCATCCCAGTTGTT < 41bp 1 0.130800782910159 1 0.999997138977051 experiment 1 Functional Loss NA| PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375685 chr19:49375681 . . 0 17 hPsi_associated_SNPs_500 0 0 0 0 0 Cytosol 1 0.783185729650001 5.72204589799341e-06 0.433628540699998 hPsi_site_7174 iPseU_CNN:5.72204589799341e-06;iRNA_PseU:0.433628540699998 7175 chr19 49375693 49375693 1 + C T rs376198987 49375685 + 49375665 49375705 41 CATTGTGTTCGTTGCTCTTATCGGTTCCCATCCCAGTTGTT CATTGTGTTCGTTGCTCTTATCGGTTCCTATCCCAGTTGTT < 41bp 1 0.1642685201327 1 0.996202945709229 experiment 1 Functional Loss NA| PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375685 chr19:49375693 . . 0 29 hPsi_associated_SNPs_501 0 0 0 0 0 Cytosol 1 0.438782036571574 0.00759410858154208 1 hPsi_site_7175 iPseU_CNN:0.00759410858154208;iRNA_PseU:1 7176 chr19 49375697 49375697 1 + C G rs529573826 49375685 + 49375665 49375705 41 CATTGTGTTCGTTGCTCTTATCGGTTCCCATCCCAGTTGTT CATTGTGTTCGTTGCTCTTATCGGTTCCCATCGCAGTTGTT < 41bp 1 0.156482148322093 1 0.983824610710144 experiment 1 Functional Loss NA| PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375685 chr19:49375697 . . 0 33 hPsi_associated_SNPs_502 0 0 0 0 0 Cytosol 1 0.455245649062437 0.0323507785797119 1 hPsi_site_7176 iPseU_CNN:0.0323507785797119;iRNA_PseU:1 7177 chr19 49425960 49425960 1 + G A rs562018840 49425943 + 49425923 49425963 41 TGAGGTGCTCAGTGATCGGCTTAACTTAGAGAAGCCCGCCC TGAGGTGCTCAGTGATCGGCTTAACTTAGAGAAGCCCACCC < 41bp 1 0.386829495711602 1 0.993087232112885 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NUCB1 ENSG00000104805 UTR3 Human protein_coding chr19:49425943 chr19:49425960 . . 0 38 hPsi_associated_SNPs_503 0 0 1 0 0 Ribosome 1 0.519695153729701 0.0138255357742301 0.960609692540598 hPsi_site_7177 iPseU_CNN:0.0138255357742301;iRNA_PseU:0.960609692540598 7178 chr19 49993254 49993254 1 + C G rs141468307 49993249 + 49993229 49993269 41 GTGATGAGCAACATTCACCATCTTTCGTTTGAGTCTCACGG GTGATGAGCAACATTCACCATCTTTGGTTTGAGTCTCACGG < 41bp 1 0.107519282746279 1 0.999979615211487 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993249 chr19:49993254 . . 0 26 hPsi_associated_SNPs_504 0 0 1 1 0 unknown 1 0.438860911629408 4.07695770259231e-05 1 hPsi_site_7178 iPseU_CNN:4.07695770259231e-05;iRNA_PseU:1 Diisocyanate-induced asthma 7179 chr19 49993254 49993254 1 + C G rs141468307 49993252 + 49993232 49993272 41 ATGAGCAACATTCACCATCTTTCGTTTGAGTCTCACGGCCA ATGAGCAACATTCACCATCTTTGGTTTGAGTCTCACGGCCA < 41bp 1 0.475802550559614 1 0.997148871421814 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993252 chr19:49993254 . . 0 23 hPsi_associated_SNPs_505 0 0 1 1 0 unknown 1 0.439097908710254 0.00570225715637207 1 hPsi_site_7179 iPseU_CNN:0.00570225715637207;iRNA_PseU:1 7180 chr20 411197 411197 1 + C T rs542666766 411177 + 411157 411197 41 CCTTGCTTGCTGTAGCGTTGTAGGGGCCCTGCCTGCACTGC CCTTGCTTGCTGTAGCGTTGTAGGGGCCCTGCCTGCACTGT < 41bp 1 0.647175058383089 1 0.992640137672424 experiment 0.705649883233821 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RBCK1 ENSG00000125826 UTR3 Human protein_coding chr20:411177 chr20:411197 . . 0 41 hPsi_associated_SNPs_506 0 0 1 0 0 Ribosome 1 0.61377239761736 0.014719724655152 0.772455204765281 hPsi_site_7180 iPseU_CNN:0.014719724655152;iRNA_PseU:0.772455204765281 7181 chr20 30102306 30102306 1 + C G rs111747661 30102290 + 30102270 30102310 41 GGCTTTCCCTGCAGAGCCGGTGTCTCCGCCTGCGTCCCTGC GGCTTTCCCTGCAGAGCCGGTGTCTCCGCCTGCGTCGCTGC < 41bp 1 0.582253349852756 1 0.61829948425293 experiment 0.835493300294488 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HM13 ENSG00000101294 UTR5 Human protein_coding chr20:30102290 chr20:30102306 . . 0 37 hPsi_associated_SNPs_508 0 0 1 0 0 Ribosome 1 0.438812634743984 0.76340103149414 1 hPsi_site_7181 iPseU_CNN:0.76340103149414;iRNA_PseU:1 7182 chr20 30135229 30135229 1 + G A rs371635339 30135237 + 30135217 30135257 41 GGCGCCCGCGCCGGCCTTCCTGCAGGGGACTCCACCGGAGC GGCGCCCGCGCCAGCCTTCCTGCAGGGGACTCCACCGGAGC < 41bp 1 0.530646465825622 1 0.986602187156677 experiment 0.938707068348755 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HM13 ENSG00000101294 intronic Human protein_coding chr20:30135237 chr20:30135229 . . 0 13 hPsi_associated_SNPs_509 0 0 1 0 0 Ribosome 1 0.438718582332718 0.026795625686646 1 hPsi_site_7182 iPseU_CNN:0.026795625686646;iRNA_PseU:1 7183 chr20 30754889 30754889 1 + T C rs1803425 30754888 + 30754868 30754908 41 CAAATCTTGGATTTTTTTTTTTCCCTAAGAGATTCTCTTTT CAAATCTTGGATTTTTTTTTTCCCCTAAGAGATTCTCTTTT < 41bp 1 0.420090366503173 1 0.752789258956909 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TM9SF4 ENSG00000101337 UTR3 Human protein_coding chr20:30754888 chr20:30754889 . . 0 22 hPsi_associated_SNPs_510 0 0 1 1 0 Nucleus 1 0.438719595512621 0.494421482086182 1 hPsi_site_7183 iPseU_CNN:0.494421482086182;iRNA_PseU:1 7184 chr20 30921819 30921819 1 + A T rs79778302 30921800 + 30921780 30921820 41 TCTGCATTGAGCCAAATATGTAGAGGACCTACCAAGCCCAC TCTGCATTGAGCCAAATATGTAGAGGACCTACCAAGCCCTC < 41bp 1 0.35959595899259 1 0.99881786108017 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIF3B ENSG00000101350 UTR3 Human protein_coding chr20:30921800 chr20:30921819 . . 0 40 hPsi_associated_SNPs_511 0 0 0 0 0 Ribosome 1 0.772251028907651 0.00236427783965998 0.455497942184699 hPsi_site_7184 iPseU_CNN:0.00236427783965998;iRNA_PseU:0.455497942184699 7185 chr20 44039168 44039168 1 + G A rs60958897 44039169 + 44039149 44039189 41 TAACTCATCAAGTAAGGTGGTACTCAAGCCATGCTGCCTCC TAACTCATCAAGTAAGGTGATACTCAAGCCATGCTGCCTCC < 41bp 1 0.511983711180575 1 0.882068455219269 experiment 0.976032577638851 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44039169 chr20:44039168 . . 0 20 hPsi_associated_SNPs_512 0 0 1 8 0 exosome 1 0.438863084386325 0.235863089561462 1 hPsi_site_7185 iPseU_CNN:0.235863089561462;iRNA_PseU:1 7186 chr20 44039180 44039180 1 + T C rs188498434 44039169 + 44039149 44039189 41 TAACTCATCAAGTAAGGTGGTACTCAAGCCATGCTGCCTCC TAACTCATCAAGTAAGGTGGTACTCAAGCCACGCTGCCTCC < 41bp 1 0.480319484938662 1 0.999856293201447 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SYS1-DBNDD2 ENSG00000244274;ENSG00000254806 UTR3 Human other chr20:44039169 chr20:44039180 . . 0 32 hPsi_associated_SNPs_513 0 0 1 8 0 exosome 1 0.438850465125685 0.000287413597106045 1 hPsi_site_7186 iPseU_CNN:0.000287413597106045;iRNA_PseU:1 7187 chr20 44047493 44047493 1 + G A rs141420243 44047502 + 44047482 44047522 41 CTCTATCCAGTGTGGATAAATCTTGGAAGGAGCTCAGTAAT CTCTATCCAGTATGGATAAATCTTGGAAGGAGCTCAGTAAT < 41bp 1 0.0247724994704985 1 0.998567163944244 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PIGT ENSG00000124155 CDS Human protein_coding chr20:44047502 chr20:44047493 nonsynonymous SNV 1.000 2 12 hPsi_associated_SNPs_514 0 0 1 0 1 Ribosome 1 0.446665892112198 0.0028656721115119 1 hPsi_site_7187 iPseU_CNN:0.0028656721115119;iRNA_PseU:1 7188 chr20 56884985 56884985 1 + C T rs544929556 56884995 + 56884975 56885015 41 TGGCCTCTCCCTTCTCAACTTAGGGCGGCGGCGGGCCCGCG TGGCCTCTCCTTTCTCAACTTAGGGCGGCGGCGGGCCCGCG < 41bp 1 0.210278073992917 1 0.937775015830994 experiment 1 Functional Loss NA| RAB22A ENSG00000124209 UTR5 Human protein_coding chr20:56884995 chr20:56884985 . . 0 11 hPsi_associated_SNPs_515 0 0 1 0 1 Ribosome 1 0.575049618598545 0.124449968338012 0.84990076280291 hPsi_site_7188 iPseU_CNN:0.124449968338012;iRNA_PseU:0.84990076280291 7189 chr20 57024541 57024541 1 + T A rs6015274 57024544 + 57024524 57024564 41 TTATTAGAAAATGTCTGTGTTAAATCCGTAGAAAAGGAAGA TTATTAGAAAATGTCTGAGTTAAATCCGTAGAAAAGGAAGA < 41bp 1 0.463389443152224 1 0.990789771080017 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VAPB ENSG00000124164 UTR3 Human protein_coding chr20:57024544 chr20:57024541 . . 0 18 hPsi_associated_SNPs_516 0 0 1 0 0 Ribosome 1 0.572188101435971 0.018420457839966 0.855623797128057 hPsi_site_7189 iPseU_CNN:0.018420457839966;iRNA_PseU:0.855623797128057 7190 chr21 35472931 35472931 1 + A G rs79471060 35472919 + 35472899 35472939 41 GGGATGATACCTCAAGAAATTAGCTGGGACCCATCACTCTG GGGATGATACCTCAAGAAATTAGCTGGGACCCGTCACTCTG < 41bp 1 0.411756765667722 1 0.996439754962921 experiment 1 Functional Loss NA| SLC5A3 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35472919 chr21:35472931 . . 0 33 hPsi_associated_SNPs_518 0 0 1 0 0 Nucleus 1 0.439327287203412 0.00712049007415794 1 hPsi_site_7190 iPseU_CNN:0.00712049007415794;iRNA_PseU:1 7191 chr21 38568009 38568009 1 + G C rs1053966 38568028 + 38568008 38568048 41 CGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGA CCACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGA < 41bp 1 0.0638558964117441 1 0.991313278675079 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38568028 chr21:38568009 nonsynonymous SNV 0.000 0 2 hPsi_associated_SNPs_519 0 0 1 0 1 Cytosol 1 0.452972559754534 0.017373442649842 1 hPsi_site_7191 iPseU_CNN:0.017373442649842;iRNA_PseU:1 7192 chr21 45457724 45457724 1 + A G rs114309802 45457721 + 45457701 45457741 41 CACCTAGAGTCTAACTTTGTTCAATTCAAAGAGGAGCTGCT CACCTAGAGTCTAACTTTGTTCAGTTCAAAGAGGAGCTGCT < 41bp 1 0.297680004245538 1 0.999805092811584 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45457721 chr21:45457724 synonymous SNV . 0 24 hPsi_associated_SNPs_520 0 0 1 0 2 Cytosol 1 0.865234140882573 0.000389814376831943 0.269531718234853 hPsi_site_7192 iPseU_CNN:0.000389814376831943;iRNA_PseU:0.269531718234853 7193 chr21 46932413 46932413 1 + C T rs546609047 46932423 + 46932403 46932443 41 CAGGACCTGGCTGCCATACTTTCCTGTATAGTTCACGTTTC CAGGACCTGGTTGCCATACTTTCCTGTATAGTTCACGTTTC < 41bp 1 0.223147517445263 1 0.999640583992004 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control COL18A1 ENSG00000182871 UTR3 Human protein_coding chr21:46932423 chr21:46932413 . . 0 11 hPsi_associated_SNPs_521 0 0 1 0 0 Nucleus 1 0.483634281958883 0.000718832015992099 1 hPsi_site_7193 iPseU_CNN:0.000718832015992099;iRNA_PseU:1 7194 chr22 21351712 21351712 1 + T C rs549934273 21351710 + 21351690 21351730 41 CTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGT CTACTGAGAAGACTACCGGCTACGCGCATGCCTATGGCAGT < 41bp 1 0.291425385847695 1 0.998333096504211 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LZTR1 ENSG00000099949 UTR3 Human protein_coding chr22:21351710 chr22:21351712 . . 0 23 hPsi_associated_SNPs_522 0 0 1 0 0 Nucleus 1 0.989353001902261 0.00333380699157804 0.021293996195477 hPsi_site_7194 iPseU_CNN:0.00333380699157804;iRNA_PseU:0.021293996195477 7195 chr22 21351714 21351714 1 + C G rs116921548 21351710 + 21351690 21351730 41 CTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGT CTACTGAGAAGACTACCGGCTATGGGCATGCCTATGGCAGT < 41bp 1 0.290766259725031 1 0.99516361951828 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LZTR1 ENSG00000099949 UTR3 Human protein_coding chr22:21351710 chr22:21351714 . . 0 25 hPsi_associated_SNPs_523 0 0 1 0 0 Nucleus 1 0.438730107810878 0.00967276096343994 1 hPsi_site_7195 iPseU_CNN:0.00967276096343994;iRNA_PseU:1 7196 chr22 24129240 24129240 1 + C T rs11090285 24129258 + 24129238 24129278 41 GGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCG GGTCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCG < 41bp 1 0.220913964616683 1 0.999830663204193 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMARCB1 ENSG00000099956 UTR5 Human protein_coding chr22:24129258 chr22:24129240 . . 0 3 hPsi_associated_SNPs_524 3 0 1 0 0 Ribosome 1 0.454707059086876 0.000338673591613992 1 hPsi_site_7196 iPseU_CNN:0.000338673591613992;iRNA_PseU:1 7197 chr22 24129257 24129257 1 + C T rs571474765 24129258 + 24129238 24129278 41 GGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCG GGCCCGGTCCGCATTTCGCTTTCCGGCTTCGGTTTCCCTCG < 41bp 1 0.351249371908623 1 0.999930679798126 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMARCB1 ENSG00000099956 UTR5 Human protein_coding chr22:24129258 chr22:24129257 . . 0 20 hPsi_associated_SNPs_525 0 0 1 0 0 Ribosome 1 0.438690802726902 0.000138640403748003 1 hPsi_site_7197 iPseU_CNN:0.000138640403748003;iRNA_PseU:1 7198 chr22 24236588 24236588 1 + A T rs112568463 24236592 - 24236572 24236612 41 GCGGCCGCCGCTGAGCTACGTGCCTGACTTCTCGGACACCA GCGGCCGCCGCTGAGCTACGTGCCAGACTTCTCGGACACCA < 41bp 1 0.150466614834134 1 0.999939799308777 experiment 1 Functional Loss NA| MIF-AS1 ENSG00000240972 UTR5 Human protein_coding chr22:24236592 chr22:24236588 . . 0 25 hPsi_associated_SNPs_526 0 0 0 0 0 unknown 1 0.62107631515425 0.000120401382446067 0.7578473696915 hPsi_site_7198 iPseU_CNN:0.000120401382446067;iRNA_PseU:0.7578473696915 7199 chr22 24236591 24236591 1 + C A rs17004038 24236592 - 24236572 24236612 41 GCGGCCGCCGCTGAGCTACGTGCCTGACTTCTCGGACACCA GCGGCCGCCGCTGAGCTACGTTCCTGACTTCTCGGACACCA < 41bp 1 0.380777094067616 1 1 experiment 1 Functional Loss NA| MIF-AS1 ENSG00000240972 UTR5 Human protein_coding chr22:24236592 chr22:24236591 . . 0 22 hPsi_associated_SNPs_527 0 0 0 0 0 unknown 1 0.439307404410222 0 1 hPsi_site_7199 iPseU_CNN:0;iRNA_PseU:1 7200 chr22 38271907 38271907 1 + A G rs61737832 38271897 + 38271877 38271917 41 GGTCACCACATACTATTATGTTGGGTTTGCATATTTGATGA GGTCACCACATACTATTATGTTGGGTTTGCGTATTTGATGA < 41bp 1 0.495573713924018 1 0.101228833198547 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38271897 chr22:38271907 synonymous SNV . 0 31 hPsi_associated_SNPs_528 0 0 1 0 0 Cytosol 1 0.442923559311684 1 1 hPsi_site_7200 iPseU_CNN:1;iRNA_PseU:1 7201 chr22 41575098 41575098 1 + G A rs75494658 41575106 + 41575086 41575126 41 TGTGCAGTAGCCGTTTGTGGTTTAAAGCAAACATGCAAGAT TGTGCAGTAGCCATTTGTGGTTTAAAGCAAACATGCAAGAT < 41bp 1 0.6788585707337 1 0.996306538581848 experiment 0.642282858532599 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock EP300 ENSG00000231993;ENSG00000232754 ncRNA_intronic Human other chr22:41575106 chr22:41575098 . . 0 13 hPsi_associated_SNPs_530 1 0 1 0 0 Cytosol 1 0.975088301479986 0.00738692283630393 0.049823397040027 hPsi_site_7201 iPseU_CNN:0.00738692283630393;iRNA_PseU:0.049823397040027 7202 chrX 2609453 2609453 1 + C G rs1803975 2609435 + 2609415 2609455 41 CTGCGCTGGCGCTGCTGCTCTTCGGCCTGCTGGGTGTTCTG CTGCGCTGGCGCTGCTGCTCTTCGGCCTGCTGGGTGTTGTG < 41bp 1 0.462374299555867 1 0.99304473400116 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2609435 chrX:2609453 nonsynonymous SNV 0.019 0 39 hPsi_associated_SNPs_531 0 0 1 0 1 Endoplasmic reticulum 1 0.441121750471419 0.01391053199768 1 hPsi_site_7202 iPseU_CNN:0.01391053199768;iRNA_PseU:1 7203 chrX 9685901 9685901 1 + T C rs17321120 9685888 + 9685868 9685908 41 AGGTAGAACGTCGCTAATAATTTCTGCCATCTTTATAATTT AGGTAGAACGTCGCTAATAATTTCTGCCATCTTCATAATTT < 41bp 1 0.485981944008169 1 0.990423381328583 experiment 1 Functional Loss NA| TBL1X ENSG00000101849 UTR3 Human protein_coding chrX:9685888 chrX:9685901 . . 0 34 hPsi_associated_SNPs_532 0 0 1 1 0 Cytosol 1 0.484708469275009 0.019153237342834 1 hPsi_site_7203 iPseU_CNN:0.019153237342834;iRNA_PseU:1 7204 chrX 19373556 19373556 1 + G A rs138237215 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATCGCTATGGAATGGGAACATCTGTTGAGAGAGCGGCAGCC < 41bp 1 0.178743475020819 1 0.998175442218781 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373556 synonymous SNV . 0 20 hPsi_associated_SNPs_533 1 0 1 0 1 Ribosome 1 0.439318523378496 0.00364911556243808 1 hPsi_site_7204 iPseU_CNN:0.00364911556243808;iRNA_PseU:1 7205 chrX 54469894 54469894 1 + T C rs36032873 54469900 + 54469880 54469920 41 ACCAACGAGTTTGATACAGTTGTGGAAGACGGGAGTCTGCC ACCAACGAGTTTGACACAGTTGTGGAAGACGGGAGTCTGCC < 41bp 1 0.470859928489361 1 0.984696865081787 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSR2 ENSG00000158526 CDS Human protein_coding chrX:54469900 chrX:54469894 synonymous SNV . 0 15 hPsi_associated_SNPs_534 0 0 1 0 2 Ribosome 1 0.458077445619564 0.030606269836426 1 hPsi_site_7205 iPseU_CNN:0.030606269836426;iRNA_PseU:1 7206 chrX 54471641 54471641 1 + C T rs11795704 54471638 + 54471618 54471658 41 GAGCTGGGCTTTGTTTTCTGTCTCCTCTAACCTCTTTCCTT GAGCTGGGCTTTGTTTTCTGTCTTCTCTAACCTCTTTCCTT < 41bp 1 0.259880513917037 1 0.992757678031921 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TSR2 ENSG00000158526 UTR3 Human protein_coding chrX:54471638 chrX:54471641 . . 0 24 hPsi_associated_SNPs_535 0 0 1 0 0 Ribosome 1 0.440113727379906 0.0144846439361579 1 hPsi_site_7206 iPseU_CNN:0.0144846439361579;iRNA_PseU:1 7207 chrX 64960509 64960509 1 + G A rs6525007 64960510 + 64960490 64960530 41 GATCCTACCCCAATTCCTTGTAGGAGTATAGGCCGGTCTAA GATCCTACCCCAATTCCTTATAGGAGTATAGGCCGGTCTAA < 41bp 1 0.341844448973963 1 0.942605018615723 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960510 chrX:64960509 . . 0 20 hPsi_associated_SNPs_536 0 0 1 0 0 Ribosome 1 0.454528535795503 0.114789962768554 1 hPsi_site_7207 iPseU_CNN:0.114789962768554;iRNA_PseU:1 7208 chrX 100387217 100387217 1 + C G rs184049547 100387237 + 100387217 100387257 41 CCTTCCTCTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC GCTTCCTCTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC < 41bp 1 0.488796830159017 1 0.995984137058258 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CENPI ENSG00000102384 CDS Human protein_coding chrX:100387237 chrX:100387217 nonsynonymous SNV 0.998 3 1 hPsi_associated_SNPs_537 0 0 0 0 2 Nucleus 1 0.438725104116673 0.00803172588348411 1 hPsi_site_7208 iPseU_CNN:0.00803172588348411;iRNA_PseU:1 7209 chrX 117875008 117875008 1 + T A rs183467302 117875003 + 117874983 117875023 41 CTCAGCCACCTGTGACAAATTTGAGTGTCTCTGTTGAAAAC CTCAGCCACCTGTGACAAATTTGAGAGTCTCTGTTGAAAAC < 41bp 1 0.328674760019951 1 0.406541287899017 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117875003 chrX:117875008 nonsynonymous SNV 0.996 2 26 hPsi_associated_SNPs_538 0 0 1 0 1 Endoplasmic reticulum 1 0.943665356457717 1 0.112669287084565 hPsi_site_7209 iPseU_CNN:1;iRNA_PseU:0.112669287084565 7210 chrX 119007305 119007305 1 + G C rs140064980 119007286 + 119007266 119007306 41 GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGGAGTCTGA GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGGAGTCTCA < 41bp 1 0.610736501736002 1 0.358233511447906 experiment 0.778526996527997 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007286 chrX:119007305 synonymous SNV . 0 40 hPsi_associated_SNPs_539 1 0 1 0 2 Ribosome 1 0.439757527293722 1 1 hPsi_site_7210 iPseU_CNN:1;iRNA_PseU:1 7211 chrX 128692641 128692641 1 + T A rs747396791 128692622 + 128692602 128692642 41 TCTTTCAGGGCTTCTTGGATTTGAAGACAATTTTTCTTCTA TCTTTCAGGGCTTCTTGGATTTGAAGACAATTTTTCTTCAA < 41bp 1 0.55548812070518 1 0.999976754188538 experiment 0.889023758589639 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock OCRL ENSG00000122126 CDS Human protein_coding chrX:128692622 chrX:128692641 synonymous SNV . 0 40 hPsi_associated_SNPs_540 1 0 1 0 2 Cytosol 1 0.999993770443486 4.64916229239165e-05 1.24591130274965e-05 hPsi_site_7211 iPseU_CNN:4.64916229239165e-05;iRNA_PseU:1.24591130274965e-05 7212 chrX 134125263 134125263 1 + C T rs775498663 134125282 + 134125262 134125302 41 TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGCGG TTACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGCGG < 41bp 1 0.518228124295986 1 0.999899983406067 experiment 0.963543751408027 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMIM10 ENSG00000184785 CDS Human protein_coding chrX:134125282 chrX:134125263 synonymous SNV . 0 2 hPsi_associated_SNPs_541 0 0 0 0 0 exosome 1 0.438726731447023 0.000200033187865989 1 hPsi_site_7212 iPseU_CNN:0.000200033187865989;iRNA_PseU:1 7213 chrX 152960076 152960076 1 + G A rs201838389 152960065 + 152960045 152960085 41 GGATGAAATGGTGCTGGTCCTTCTTCACCCCGCTGGTCTGC GGATGAAATGGTGCTGGTCCTTCTTCACCCCACTGGTCTGC < 41bp 1 0.552277238599137 1 0.99997091293335 experiment 0.895445522801725 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152960065 chrX:152960076 synonymous SNV . 0 32 hPsi_associated_SNPs_542 0 0 1 0 2 Ribosome 1 0.786618978280759 5.81741332998931e-05 0.426762043438482 hPsi_site_7213 iPseU_CNN:5.81741332998931e-05;iRNA_PseU:0.426762043438482 7214 chr14 45542716 45542716 1 + A G ACC 45542732 + 45542712 45542752 41 TCAAAAAGAGTTTGGAGGAATTACTCGATATGACAATTTTA TCAAGAAGAGTTTGGAGGAATTACTCGATATGACAATTTTA < 41bp 1 0.6594618384156 1 0.99151074886322 experiment 0.6810763231688 Functional Loss NA| TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45542732 chr14:45542716 synonymous SNV . 0 5 hPsi_associated_SNPs_545 0 0 1 0 0 unknown 1 0.439201606062649 0.01697850227356 1 hPsi_site_7214 iPseU_CNN:0.01697850227356;iRNA_PseU:1 7215 chrX 51644766 51644766 1 + C T BLCA 51644776 + 51644756 51644796 41 AGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG AGCAAGAACCTGCATGGGAATTGGAGATGAGGCTGTGTCTG < 41bp 1 0.502622893634779 1 0.993155658245087 experiment 0.994754212730443 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644776 chrX:51644766 nonsynonymous SNV 1.000 4 11 hPsi_associated_SNPs_546 0 0 1 0 0 chromatin 1 0.455101485838181 0.013688683509826 1 hPsi_site_7215 iPseU_CNN:0.013688683509826;iRNA_PseU:1 7216 chr1 93720082 93720082 1 + G C BLCA 93720071 + 93720051 93720091 41 ACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAA ACAAAATGCTAAAGAACAGCTTCGAGAAAAACAGTTTATAA < 41bp 1 0.687025966499814 1 0.999341726303101 experiment 0.625948067000373 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93720071 chr1:93720082 nonsynonymous SNV 0.995 3 32 hPsi_associated_SNPs_548 0 0 0 0 0 chromatin 1 0.433289853126649 0.00131654739379794 1 hPsi_site_7216 iPseU_CNN:0.00131654739379794;iRNA_PseU:1 7217 chr6 33179042 33179042 1 + C G BLCA 33179034 + 33179014 33179054 41 GGAGAAGGGGATGGAGAAGATGTGAGCTCAGACTCCGCCCC GGAGAAGGGGATGGAGAAGATGTGAGCTGAGACTCCGCCCC < 41bp 1 0.222609001779807 1 0.999019026756287 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RING1 ENSG00000204227 CDS Human protein_coding chr6:33179034 chr6:33179042 stopgain 0.998 0 29 hPsi_associated_SNPs_550 0 0 1 0 0 Ribosome 1 0.439477358109163 0.00196194648742609 1 hPsi_site_7217 iPseU_CNN:0.00196194648742609;iRNA_PseU:1 7218 chrX 154282927 154282927 1 + C A BLCA 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGAGGCTTTATGCTTGGCATGGCATCC < 41bp 1 0.54824377740549 1 0.978483915328979 experiment 0.90351244518902 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282927 nonsynonymous SNV 1.000 3 24 hPsi_associated_SNPs_551 0 0 1 0 1 Ribosome 1 0.438718592995103 0.0430321693420419 1 hPsi_site_7218 iPseU_CNN:0.0430321693420419;iRNA_PseU:1 7219 chr1 100756986 100756986 1 + G C BLCA 100756966 + 100756946 100756986 41 CTTCTGATTTCAGGCTAAATTTATTGTGAAGAAATCAGAAG CTTCTGATTTCAGGCTAAATTTATTGTGAAGAAATCAGAAC < 41bp 1 0.284184253282433 1 0.263621389865875 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RTCA ENSG00000137996 CDS Human protein_coding chr1:100756966 chr1:100756986 nonsynonymous SNV 1.000 2 41 hPsi_associated_SNPs_552 0 0 1 0 1 Ribosome 1 0.453478721571087 1 1 hPsi_site_7219 iPseU_CNN:1;iRNA_PseU:1 7220 chr17 42151595 42151595 1 + C T BLCA 42151608 + 42151588 42151628 41 TCCAGCCCAGGTTCACCAGTTCCCCTCTTCTTGTGAGACTG TCCAGCCTAGGTTCACCAGTTCCCCTCTTCTTGTGAGACTG < 41bp 1 0.130396163065478 1 0.991654276847839 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42151608 chr17:42151595 stopgain 0.987 0 8 hPsi_associated_SNPs_553 0 0 1 0 2 Ribosome 1 0.438699704900452 0.016691446304322 1 hPsi_site_7220 iPseU_CNN:0.016691446304322;iRNA_PseU:1 7221 chr12 7046397 7046397 1 + G C BLCA 7046399 + 7046379 7046419 41 AGACAGCCACCCCACCCGGATACAAACCCGGGTCGCCTCCC AGACAGCCACCCCACCCGCATACAAACCCGGGTCGCCTCCC < 41bp 1 0.551073349302698 1 0.999994993209839 experiment 0.897853301394604 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATN1 ENSG00000111676 CDS Human protein_coding chr12:7046399 chr12:7046397 nonsynonymous SNV 0.049 0 19 hPsi_associated_SNPs_554 0 0 0 0 0 Endoplasmic reticulum 1 0.438739388488841 1.00135803220436e-05 1 hPsi_site_7221 iPseU_CNN:1.00135803220436e-05;iRNA_PseU:1 7222 chr1 224340961 224340961 1 + G C BLCA 224340958 + 224340938 224340978 41 CCTCTATGGCAATGGAGTACTTTGATGAAAAGATTGTTCCA CCTCTATGGCAATGGAGTACTTTCATGAAAAGATTGTTCCA < 41bp 1 0.0542055497143897 1 0.97896671295166 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FBXO28 ENSG00000143756 CDS Human protein_coding chr1:224340958 chr1:224340961 nonsynonymous SNV 1.000 4 24 hPsi_associated_SNPs_555 0 0 1 0 1 Cytosol 1 0.440446498701124 0.0420665740966799 1 hPsi_site_7222 iPseU_CNN:0.0420665740966799;iRNA_PseU:1 7223 chr11 122669698 122669698 1 + C T BLCA 122669678 + 122669658 122669698 41 TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTC TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTT < 41bp 1 0.203517539675624 1 0.974401950836182 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122669678 chr11:122669698 nonsynonymous SNV 0.457 4 41 hPsi_associated_SNPs_556 0 0 0 0 2 Ribosome 1 0.438408793569179 0.0511960983276361 1 hPsi_site_7223 iPseU_CNN:0.0511960983276361;iRNA_PseU:1 7224 chr15 31197412 31197412 1 + G C BLCA 31197401 + 31197381 31197421 41 AGGATGAAGAATTTGCCGGTTCTAGTCCACAGAGTTCCAAA AGGATGAAGAATTTGCCGGTTCTAGTCCACACAGTTCCAAA < 41bp 1 0.315682861604652 1 0.999878644943237 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31197401 chr15:31197412 nonsynonymous SNV 0.203 1 32 hPsi_associated_SNPs_557 0 0 0 0 0 Cytosol 1 0.448917450857471 0.000242710113526057 1 hPsi_site_7224 iPseU_CNN:0.000242710113526057;iRNA_PseU:1 7225 chr3 33886985 33886985 1 + C G BLCA 33886975 + 33886955 33886995 41 GATGGACAAGTGAAAGAATGTTACCAGTCTCATCGTGACAC GATGGACAAGTGAAAGAATGTTACCAGTCTGATCGTGACAC < 41bp 1 0.1040349281568 1 0.999370336532593 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33886975 chr3:33886985 nonsynonymous SNV 0.998 4 31 hPsi_associated_SNPs_558 0 0 1 0 2 Nucleus 1 0.443758147317945 0.00125932693481401 1 hPsi_site_7225 iPseU_CNN:0.00125932693481401;iRNA_PseU:1 7226 chr1 154234112 154234112 1 + G A BLCA 154234130 + 154234110 154234150 41 GTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA GTAAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA < 41bp 1 0.115607619919245 1 0.683507323265076 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154234130 chr1:154234112 synonymous SNV . 0 3 hPsi_associated_SNPs_559 0 0 1 0 2 Nucleus 1 0.438718592995454 0.632985353469848 1 hPsi_site_7226 iPseU_CNN:0.632985353469848;iRNA_PseU:1 7227 chr10 126655268 126655268 1 + C G BLCA 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGCTTGCTGAATCGTCCTTGTGCCTTTGATGTTGGCTA < 41bp 1 0.482521279892739 1 0.97830593585968 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655268 nonsynonymous SNV 1.000 3 23 hPsi_associated_SNPs_561 0 0 1 0 1 Ribosome 1 0.438805122650935 0.0433881282806401 1 hPsi_site_7227 iPseU_CNN:0.0433881282806401;iRNA_PseU:1 7228 chr3 108407451 108407451 1 + A G BLCA 108407465 + 108407445 108407485 41 AGGAAAATCAGTGTCAAATGTTAATTGTGTTTCACCTAGTC AGGAAAGTCAGTGTCAAATGTTAATTGTGTTTCACCTAGTC < 41bp 1 0.324978240043575 1 0.995816469192505 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108407465 chr3:108407451 synonymous SNV . 0 7 hPsi_associated_SNPs_563 0 0 1 0 0 Ribosome 1 0.997200645313688 0.00836706161499001 0.00559870937262308 hPsi_site_7228 iPseU_CNN:0.00836706161499001;iRNA_PseU:0.00559870937262308 7229 chr1 154961103 154961103 1 + G A BLCA 154961118 + 154961098 154961138 41 TGGCTGAGGCCCAGGCCCACTTTGGACGTAGGCTTGGCCTG TGGCTAAGGCCCAGGCCCACTTTGGACGTAGGCTTGGCCTG < 41bp 1 0.196501556723583 1 0.999795198440552 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154961118 chr1:154961103 nonsynonymous SNV 0.929 0 6 hPsi_associated_SNPs_564 0 0 1 0 0 Cytosol 1 0.447865145456382 0.00040960311889604 1 hPsi_site_7229 iPseU_CNN:0.00040960311889604;iRNA_PseU:1 7230 chr17 35837060 35837060 1 + C G BLCA 35837052 + 35837032 35837072 41 AAACCCGGAAAATCTATGATTTCCTCATCAGAGAAGGATAC AAACCCGGAAAATCTATGATTTCCTCATGAGAGAAGGATAC < 41bp 1 0.318275827235805 1 0.996916651725769 experiment 1 Functional Loss NA| TADA2A ENSG00000108264 CDS Human other chr17:35837052 chr17:35837060 nonsynonymous SNV 1.000 2 29 hPsi_associated_SNPs_565 0 0 1 0 0 chromatin 1 0.438735198864659 0.00616669654846191 1 hPsi_site_7230 iPseU_CNN:0.00616669654846191;iRNA_PseU:1 7231 chr1 27614209 27614209 1 + C T BLCA 27614196 + 27614176 27614216 41 CGCTGGGGACCGCATCTTGATCACGGGGGCAGCCGACTCTA CGCTGGGGACCGCATCTTGATCACGGGGGCAGCTGACTCTA < 41bp 1 0.273144574225688 1 0.934658527374268 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27614196 chr1:27614209 synonymous SNV . 0 34 hPsi_associated_SNPs_566 0 0 1 0 1 Cytosol 1 0.474997080933871 0.130682945251464 1 hPsi_site_7231 iPseU_CNN:0.130682945251464;iRNA_PseU:1 7232 chr11 67074372 67074372 1 + G A BLCA 67074361 + 67074341 67074381 41 GCTCCGCTACCTGCTGGTAGTTTCTACACGAGAAGGAGAAG GCTCCGCTACCTGCTGGTAGTTTCTACACGAAAAGGAGAAG < 41bp 1 0.535007859692826 1 1 experiment 0.929984280614349 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67074361 chr11:67074372 nonsynonymous SNV 0.153 0 32 hPsi_associated_SNPs_567 0 0 1 2 2 nucleus 1 0.439967385932144 0 1 hPsi_site_7232 iPseU_CNN:0;iRNA_PseU:1 7233 chr1 45101777 45101777 1 + G C BLCA 45101766 + 45101746 45101786 41 GCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTG GCATGAGAACAACAACCGCTTTGAGGAGTATCAGTGGTGTG < 41bp 1 0.354405757022879 1 0.999874234199524 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RNF220 ENSG00000187147 CDS Human protein_coding chr1:45101766 chr1:45101777 nonsynonymous SNV 1.000 5 32 hPsi_associated_SNPs_568 0 0 1 0 2 Ribosome 1 0.442792379814143 0.000251531600951926 1 hPsi_site_7233 iPseU_CNN:0.000251531600951926;iRNA_PseU:1 7234 chr10 7844765 7844765 1 + C T BLCA 7844750 + 7844730 7844770 41 TTGACAAATTGACATTGACATTCAACCGTACCCGCCAAGCT TTGACAAATTGACATTGACATTCAACCGTACCCGCTAAGCT < 41bp 1 0.420381031663335 1 0.999448120594025 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844750 chr10:7844765 stopgain 0.997 1 36 hPsi_associated_SNPs_569 0 0 1 0 2 Ribosome 1 0.477402123089983 0.00110375881195002 1 hPsi_site_7234 iPseU_CNN:0.00110375881195002;iRNA_PseU:1 7235 chr7 66767828 66767828 1 + C T BLCA 66767817 + 66767797 66767837 41 TCCCACCTGCATGTACCGGCTCTCTAACGTGCAAGGCAGGA TCCCACCTGCATGTACCGGCTCTCTAACGTGTAAGGCAGGA < 41bp 1 0.340193163259523 1 0.989972233772278 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STAG3L4 ENSG00000067601;ENSG00000106610 ncRNA_exonic Human other chr7:66767817 chr7:66767828 . . 0 32 hPsi_associated_SNPs_571 0 0 1 0 1 unknown 1 0.674955690167192 0.0200555324554439 0.650088619665616 hPsi_site_7235 iPseU_CNN:0.0200555324554439;iRNA_PseU:0.650088619665616 7236 chr2 216190858 216190858 1 + G A BLCA 216190840 + 216190820 216190860 41 AAGGACACCTCCTTGGAGACTAGACGCCAGTTAGCCTTGAA AAGGACACCTCCTTGGAGACTAGACGCCAGTTAGCCTTAAA < 41bp 1 0.646910903436876 1 0.959121406078339 experiment 0.706178193126248 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216190840 chr2:216190858 synonymous SNV . 0 39 hPsi_associated_SNPs_572 0 0 1 0 1 chromatin 1 0.659545293421176 0.0817571878433221 0.680909413157648 hPsi_site_7236 iPseU_CNN:0.0817571878433221;iRNA_PseU:0.680909413157648 7237 chr17 39973408 39973408 1 + G A BLCA 39973390 + 39973370 39973410 41 GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCAAC < 41bp 1 0.544547706968989 1 0.999998688697815 experiment 0.910904586062021 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39973390 chr17:39973408 nonsynonymous SNV 0.991 5 39 hPsi_associated_SNPs_573 1 0 1 0 2 Nucleus 1 0.488904357991136 2.62260436989514e-06 1 hPsi_site_7237 iPseU_CNN:2.62260436989514e-06;iRNA_PseU:1 7238 chr6 47576922 47576922 1 + C G BLCA 47576913 + 47576893 47576933 41 CTAAAGCAAATACAACTGCTTTCCTGACTCCATTAGAAATC CTAAAGCAAATACAACTGCTTTCCTGACTGCATTAGAAATC < 41bp 1 0.509777202322395 1 0.923734188079834 experiment 0.980445595355211 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576913 chr6:47576922 nonsynonymous SNV 0.960 0 30 hPsi_associated_SNPs_574 0 0 1 0 1 Cytosol 1 0.438757219018209 0.152531623840332 1 hPsi_site_7238 iPseU_CNN:0.152531623840332;iRNA_PseU:1 7239 chr3 169802272 169802272 1 + C T BLCA 169802285 + 169802265 169802305 41 GCTTATTCTCGTCACTGTCCTTTCTATGTCAGCATTCAGAG GCTTATTTTCGTCACTGTCCTTTCTATGTCAGCATTCAGAG < 41bp 1 0.302179188718975 1 0.99692964553833 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GPR160 ENSG00000173890 CDS Human protein_coding chr3:169802285 chr3:169802272 nonsynonymous SNV 0.001 0 8 hPsi_associated_SNPs_575 0 0 1 0 0 Cytosol 1 0.43856827251083 0.00614070892334007 1 hPsi_site_7239 iPseU_CNN:0.00614070892334007;iRNA_PseU:1 7240 chr11 122669667 122669667 1 + A T BLCA 122669678 + 122669658 122669698 41 TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTC TTATTAGAGTGCAATACCATTATCGATCATGTCTATTGCTC < 41bp 1 0.515837487024283 1 0.925331473350525 experiment 0.968325025951434 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122669678 chr11:122669667 nonsynonymous SNV 0.282 4 10 hPsi_associated_SNPs_576 0 0 0 0 2 Ribosome 1 0.976127953858275 0.14933705329895 0.0477440922834498 hPsi_site_7240 iPseU_CNN:0.14933705329895;iRNA_PseU:0.0477440922834498 7241 chr15 22990158 22990158 1 + C T BLCA 22990155 + 22990135 22990175 41 CGGCTTCTCGGCTACCAGGGTATCGCCGTGGTCATGGAGGA CGGCTTCTCGGCTACCAGGGTATTGCCGTGGTCATGGAGGA < 41bp 1 0.624665395547045 1 0.943174481391907 experiment 0.75066920890591 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22990155 chr15:22990158 synonymous SNV . 0 24 hPsi_associated_SNPs_577 0 0 1 0 1 Cytosol 1 0.439080679028315 0.113651037216186 1 hPsi_site_7241 iPseU_CNN:0.113651037216186;iRNA_PseU:1 7242 chr17 74740463 74740463 1 + C G BLCA 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGGGGACAGTTGTATTCTTTCTCATTCGGAA < 41bp 1 0.521317006396924 1 0.956268310546875 experiment 0.957365987206151 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740463 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_578 0 0 1 0 2 Endoplasmic reticulum 1 0.432370937596523 0.08746337890625 1 hPsi_site_7242 iPseU_CNN:0.08746337890625;iRNA_PseU:1 7243 chr1 53493690 53493690 1 + G A BLCA 53493671 + 53493651 53493691 41 ACTCATCAAATTGAAGCTGTTCCAACCAGCTCTGCAAGTGA ACTCATCAAATTGAAGCTGTTCCAACCAGCTCTGCAAGTAA < 41bp 1 0.414675378697945 1 0.827290296554565 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53493671 chr1:53493690 nonsynonymous SNV 0.993 0 40 hPsi_associated_SNPs_579 0 0 1 0 3 Ribosome 1 0.438718246537902 0.34541940689087 1 hPsi_site_7243 iPseU_CNN:0.34541940689087;iRNA_PseU:1 7244 chr11 71943351 71943351 1 + C T BLCA 71943358 + 71943338 71943378 41 TTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACGGCT TTGTGAATTGTCATCTCACCTCGGGAAATGAGAAGACGGCT < 41bp 1 0.154367084944782 1 0.918777942657471 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71943358 chr11:71943351 synonymous SNV . 0 14 hPsi_associated_SNPs_580 0 0 1 0 2 Cytosol 1 0.735206870671922 0.162444114685058 0.529586258656156 hPsi_site_7244 iPseU_CNN:0.162444114685058;iRNA_PseU:0.529586258656156 7245 chr19 49464256 49464256 1 + C T BLCA 49464272 + 49464252 49464292 41 TCCTCTGGGACCCTGGGCCTTCTGGAGCAGGTCACAGTGGT TCCTTTGGGACCCTGGGCCTTCTGGAGCAGGTCACAGTGGT < 41bp 1 0.336956604943824 1 0.96410596370697 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BAX ENSG00000087088 CDS Human protein_coding chr19:49464272 chr19:49464256 synonymous SNV . 0 5 hPsi_associated_SNPs_583 0 0 1 0 0 Cytosol 1 0.484981731574805 0.07178807258606 1 hPsi_site_7245 iPseU_CNN:0.07178807258606;iRNA_PseU:1 7246 chr17 2278935 2278935 1 + A T BLCA 2278919 + 2278899 2278939 41 GCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGAC GCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCTGGAC < 41bp 1 0.55951487474505 1 0.995296895503998 experiment 0.8809702505099 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278919 chr17:2278935 synonymous SNV . 0 37 hPsi_associated_SNPs_585 0 0 1 0 0 Cytosol 1 0.99683589336451 0.00940620899200395 0.0063282132709801 hPsi_site_7246 iPseU_CNN:0.00940620899200395;iRNA_PseU:0.0063282132709801 7247 chr11 9450105 9450105 1 + C T BLCA 9450120 + 9450100 9450140 41 AAGATCAGATGGAATACATGTTGCAGAATCATGTATTCCCT AAGATTAGATGGAATACATGTTGCAGAATCATGTATTCCCT < 41bp 1 0.455878659283295 1 0.992293477058411 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide IPO7 ENSG00000205339 CDS Human protein_coding chr11:9450120 chr11:9450105 stopgain 0.999 1 6 hPsi_associated_SNPs_586 0 0 1 0 1 Cytosol 1 0.438729051727809 0.015413045883178 1 hPsi_site_7247 iPseU_CNN:0.015413045883178;iRNA_PseU:1 7248 chr8 145151968 145151968 1 + G C BLCA 145151971 + 145151951 145151991 41 ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTG ATGTCCCAGATAGCCAACGATGTGTGCACCTTCCTGCGCTG < 41bp 1 0.636140909624864 1 0.1981460750103 experiment 0.727718180750273 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151971 chr8:145151968 nonsynonymous SNV 0.915 4 18 hPsi_associated_SNPs_587 0 0 1 0 2 Ribosome 1 0.633876904185112 1 0.732246191629777 hPsi_site_7248 iPseU_CNN:1;iRNA_PseU:0.732246191629777 7249 chr20 44047495 44047495 1 + G C BLCA 44047502 + 44047482 44047522 41 CTCTATCCAGTGTGGATAAATCTTGGAAGGAGCTCAGTAAT CTCTATCCAGTGTCGATAAATCTTGGAAGGAGCTCAGTAAT < 41bp 1 0.0929762580572694 1 0.996064782142639 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PIGT ENSG00000124155 CDS Human protein_coding chr20:44047502 chr20:44047495 nonsynonymous SNV . 0 14 hPsi_associated_SNPs_588 0 0 1 0 1 Ribosome 1 0.447398108414164 0.0078704357147219 1 hPsi_site_7249 iPseU_CNN:0.0078704357147219;iRNA_PseU:1 7250 chr5 157161651 157161651 1 + G A BLCA 157161649 + 157161629 157161669 41 GTTTTATTGGCGGGATTACTTTGAGGACCAGCCCCTTCTGT GTTTTATTGGCGGGATTACTTTAAGGACCAGCCCCTTCTGT < 41bp 1 0.675196367633366 1 0.967010021209717 experiment 0.649607264733269 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control THG1L ENSG00000113272;ENSG00000268432 CDS Human other chr5:157161649 chr5:157161651 nonsynonymous SNV 1.000 0 23 hPsi_associated_SNPs_589 0 0 1 0 1 Nucleus 1 0.43872031438679 0.065979957580566 1 hPsi_site_7250 iPseU_CNN:0.065979957580566;iRNA_PseU:1 7251 chr3 108407485 108407485 1 + C T BLCA 108407465 + 108407445 108407485 41 AGGAAAATCAGTGTCAAATGTTAATTGTGTTTCACCTAGTC AGGAAAATCAGTGTCAAATGTTAATTGTGTTTCACCTAGTT < 41bp 1 0.550561892116462 1 0.993950963020325 experiment 0.898876215767077 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108407465 chr3:108407485 nonsynonymous SNV 0.993 1 41 hPsi_associated_SNPs_590 0 0 1 0 1 Ribosome 1 0.438818610025975 0.0120980739593499 1 hPsi_site_7251 iPseU_CNN:0.0120980739593499;iRNA_PseU:1 7252 chr3 132226123 132226123 1 + G A BLCA 132226105 + 132226085 132226125 41 ATTGTGACAAAACTTATGGATCAGAATTTGTCTACAGTGAT ATTGTGACAAAACTTATGGATCAGAATTTGTCTACAGTAAT < 41bp 1 0.135248213993926 1 0.997838139533997 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DNAJC13 ENSG00000138246 CDS Human protein_coding chr3:132226105 chr3:132226123 nonsynonymous SNV 0.996 1 39 hPsi_associated_SNPs_591 0 0 1 0 1 Nucleus 1 0.708844551959582 0.00432372093200595 0.582310896080837 hPsi_site_7252 iPseU_CNN:0.00432372093200595;iRNA_PseU:0.582310896080837 7253 chr11 134113161 134113161 1 + G C BLCA 134113150 + 134113130 134113170 41 GTACCATGAGAATGACACGATAGCCAAGTACGAGATCATGG GTACCATGAGAATGACACGATAGCCAAGTACCAGATCATGG < 41bp 1 0.395074813229969 1 0.999930143356323 experiment 1 Functional Loss NA| VPS26B ENSG00000151502 CDS Human protein_coding chr11:134113150 chr11:134113161 nonsynonymous SNV 0.998 4 32 hPsi_associated_SNPs_592 0 0 1 0 1 Ribosome 1 0.438826193344094 0.00013971328735396 1 hPsi_site_7253 iPseU_CNN:0.00013971328735396;iRNA_PseU:1 7254 chr9 36083430 36083430 1 + C G BLCA 36083425 + 36083405 36083445 41 CCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTC CCGAGAATACTGTCAAGCCATTTTTGGAACAGACTCTTCTC < 41bp 1 0.312953925996764 1 0.912470459938049 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RECK ENSG00000122707 CDS Human protein_coding chr9:36083425 chr9:36083430 nonsynonymous SNV 1.000 4 26 hPsi_associated_SNPs_593 0 0 0 0 1 exosome 1 0.438867530309645 0.175059080123902 1 hPsi_site_7254 iPseU_CNN:0.175059080123902;iRNA_PseU:1 7255 chr14 23344898 23344898 1 + G A BLCA 23344897 + 23344877 23344917 41 CTTGGGCTTTGGAGATGCAGTGCATGTGTATGACGGCCCTG CTTGGGCTTTGGAGATGCAGTACATGTGTATGACGGCCCTG < 41bp 1 0.613399480979358 1 1 experiment 0.773201038041284 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LRP10 ENSG00000197324 CDS Human protein_coding chr14:23344897 chr14:23344898 synonymous SNV . 0 22 hPsi_associated_SNPs_594 0 0 1 0 0 Ribosome 1 0.445852314587261 0 1 hPsi_site_7255 iPseU_CNN:0;iRNA_PseU:1 7256 chr19 36221009 36221009 1 + G A BLCA 36220991 + 36220971 36221011 41 TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTAAT < 41bp 1 0.404257299537539 1 0.99897176027298 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36220991 chr19:36221009 nonsynonymous SNV 0.953 3 39 hPsi_associated_SNPs_595 0 0 1 0 1 chromatin 1 0.505251243012628 0.00205647945404008 0.989497513974744 hPsi_site_7256 iPseU_CNN:0.00205647945404008;iRNA_PseU:0.989497513974744 7257 chr14 39597505 39597505 1 + G C BLCA 39597508 + 39597488 39597528 41 CAGTAACTAGTGTCTTGGAATATCTGAGTAATTGGTTTGGA CAGTAACTAGTGTCTTGCAATATCTGAGTAATTGGTTTGGA < 41bp 1 0.383744941833777 1 0.990656077861786 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39597508 chr14:39597505 nonsynonymous SNV 1.000 4 18 hPsi_associated_SNPs_597 0 0 1 1 2 Ribosome 1 0.438726368687106 0.018687844276428 1 hPsi_site_7257 iPseU_CNN:0.018687844276428;iRNA_PseU:1 7258 chr12 124497235 124497235 1 + C T BLCA 124497241 + 124497221 124497261 41 GGAAGGCGTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG GGAAGGCGTTCAGTTAGAGTTCGAGCCTCTGCATCCACCAG < 41bp 1 0.577926871950834 1 0.99999988079071 experiment 0.844146256098333 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497241 chr12:124497235 stopgain 0.998 0 15 hPsi_associated_SNPs_598 0 0 1 0 0 Nucleus 1 0.445573782691119 2.38418579989741e-07 1 hPsi_site_7258 iPseU_CNN:2.38418579989741e-07;iRNA_PseU:1 7259 chr13 49039158 49039158 1 + G T BLCA 49039178 + 49039158 49039198 41 GAAGAGGAGTATGATTCTATTATAGTATTCTATAACTCGGT TAAGAGGAGTATGATTCTATTATAGTATTCTATAACTCGGT < 41bp 1 0.547024330140706 1 0.999314069747925 experiment 0.905951339718588 Functional Loss NA| RB1 ENSG00000139687 CDS Human protein_coding chr13:49039178 chr13:49039158 stopgain 1.000 1 1 hPsi_associated_SNPs_599 0 0 1 0 1 Nucleus 1 0.438718840611243 0.00137186050414995 1 hPsi_site_7259 iPseU_CNN:0.00137186050414995;iRNA_PseU:1 7260 chr3 160148907 160148907 1 + G C BLCA 160148899 + 160148879 160148919 41 TCAAGAAAATGAACATGCTCTTCAAAAAGATGCACTTAGTA TCAAGAAAATGAACATGCTCTTCAAAAACATGCACTTAGTA < 41bp 1 0.325198835051159 1 0.998701989650726 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160148899 chr3:160148907 nonsynonymous SNV 1.000 3 29 hPsi_associated_SNPs_600 0 0 1 0 2 Nucleus 1 0.450254533981005 0.00259602069854803 1 hPsi_site_7260 iPseU_CNN:0.00259602069854803;iRNA_PseU:1 7261 chr10 3154472 3154472 1 + G A BLCA 3154464 + 3154444 3154484 41 AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGTGAGG AGGAGATTTCAAGATGCGGTTCGACTCCAAGGGAGGTGAGG < 41bp 1 0.281315945886782 1 0.969800889492035 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PFKP ENSG00000067057 CDS Human protein_coding chr10:3154464 chr10:3154472 nonsynonymous SNV 0.075 4 29 hPsi_associated_SNPs_601 0 0 1 0 2 Nucleus 1 0.441933986204933 0.06039822101593 1 hPsi_site_7261 iPseU_CNN:0.06039822101593;iRNA_PseU:1 7262 chr10 75541837 75541837 1 + G A BLCA 75541824 + 75541804 75541844 41 CCGCAAAGCCTGCCGGGAGCTTGGTGCGCTATGGCGACACC CCGCAAAGCCTGCCGGGAGCTTGGTGCGCTATGACGACACC < 41bp 1 0.412583871170613 1 0.99813175201416 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75541824 chr10:75541837 nonsynonymous SNV 0.958 2 34 hPsi_associated_SNPs_602 0 0 1 0 0 Ribosome 1 0.556619900336401 0.00373649597167991 0.886760199327199 hPsi_site_7262 iPseU_CNN:0.00373649597167991;iRNA_PseU:0.886760199327199 7263 chr16 88923573 88923573 1 + C T BLCA 88923566 + 88923546 88923586 41 CGAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGATTGCCA CGAGCCTCCCAAGATGGCGGTGTGCATTGCGGTGATTGCCA < 41bp 1 0.218266083594755 1 0.976567625999451 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88923566 chr16:88923573 synonymous SNV . 0 28 hPsi_associated_SNPs_603 0 0 1 0 1 Ribosome 1 0.4442099939404 0.046864748001098 1 hPsi_site_7263 iPseU_CNN:0.046864748001098;iRNA_PseU:1 7264 chr21 35514791 35514791 1 + G C BLCA 35514801 + 35514781 35514821 41 GATGTGATTAGAGGGAATATTGTCAAACACCCTCTGACCCA GATGTGATTACAGGGAATATTGTCAAACACCCTCTGACCCA < 41bp 1 0.34341147304303 1 0.969845116138458 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MRPS6 ENSG00000243927 CDS Human protein_coding chr21:35514801 chr21:35514791 nonsynonymous SNV 0.993 3 11 hPsi_associated_SNPs_604 0 0 1 0 1 Ribosome 1 0.439959949906066 0.0603097677230839 1 hPsi_site_7264 iPseU_CNN:0.0603097677230839;iRNA_PseU:1 7265 chr10 116734976 116734976 1 + A T BLCA 116734957 + 116734937 116734977 41 TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAA TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACTA < 41bp 1 0.666809078031984 1 0.999207317829132 experiment 0.666381843936033 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116734957 chr10:116734976 synonymous SNV . 0 40 hPsi_associated_SNPs_605 0 0 1 0 1 Ribosome 1 0.999988234747904 0.00158536434173606 2.35305041922373e-05 hPsi_site_7265 iPseU_CNN:0.00158536434173606;iRNA_PseU:2.35305041922373e-05 7266 chrX 100402961 100402961 1 + G C BLCA 100402974 + 100402954 100402994 41 GCAGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA GCAGCAACACTTATCAAGAATTTAATCACTATTTGACATCA < 41bp 1 0.643368813506788 1 0.997303068637848 experiment 0.713262372986423 Functional Loss NA| CENPI ENSG00000102384 CDS Human protein_coding chrX:100402974 chrX:100402961 nonsynonymous SNV 0.866 0 8 hPsi_associated_SNPs_607 0 0 1 0 1 Nucleus 1 0.457589873544368 0.00539386272430398 1 hPsi_site_7266 iPseU_CNN:0.00539386272430398;iRNA_PseU:1 7267 chrX 19373563 19373563 1 + G A BLCA 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATCGCTATGGAATGGGAACGTCTGTTAAGAGAGCGGCAGCC < 41bp 1 0.208366115594923 1 0.979772090911865 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373563 nonsynonymous SNV 0.998 2 27 hPsi_associated_SNPs_608 0 0 1 0 1 Ribosome 1 0.449376971390864 0.04045581817627 1 hPsi_site_7267 iPseU_CNN:0.04045581817627;iRNA_PseU:1 7268 chrX 119007290 119007290 1 + G A BLCA 119007286 + 119007266 119007306 41 GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGGAGTCTGA GGAAAAAAGGGTTGCTCATTTTGGATATCACTGGAGTCTGA < 41bp 1 0.572359250786229 1 0.320954471826553 experiment 0.855281498427541 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007286 chrX:119007290 synonymous SNV . 0 25 hPsi_associated_SNPs_609 0 0 1 0 2 Ribosome 1 0.442730562122933 1 1 hPsi_site_7268 iPseU_CNN:1;iRNA_PseU:1 7269 chr1 40525754 40525754 1 + A G BLCA 40525765 + 40525745 40525785 41 CAGCTCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGT CAGCTCCATGTGTGCAGGCATTTGACTCGCTGCTTGCTGGT < 41bp 1 0.440728294973427 1 0.999496459960938 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525765 chr1:40525754 nonsynonymous SNV 0.996 1 10 hPsi_associated_SNPs_611 0 0 1 0 3 Ribosome 1 0.485438369394314 0.00100708007812389 1 hPsi_site_7269 iPseU_CNN:0.00100708007812389;iRNA_PseU:1 7270 chr17 42266543 42266543 1 + C T BLCA 42266527 + 42266507 42266547 41 AGCTTGGCTCTCTACCTACGTAGCAGACAGCGGTAGCAACC AGCTTGGCTCTCTACCTACGTAGCAGACAGCGGTAGTAACC < 41bp 1 0.36097252765791 1 0.997035264968872 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266527 chr17:42266543 synonymous SNV . 0 37 hPsi_associated_SNPs_612 0 0 1 0 0 Endoplasmic reticulum 1 0.449553774253571 0.00592947006225608 1 hPsi_site_7270 iPseU_CNN:0.00592947006225608;iRNA_PseU:1 7271 chr9 140509226 140509226 1 + G C BLCA 140509212 + 140509192 140509232 41 CCCACTTCTTGGACCCCGTCTTCCTCTCCACCAAGAGCCAT CCCACTTCTTGGACCCCGTCTTCCTCTCCACCAACAGCCAT < 41bp 1 0.375093136153717 1 0.993443965911865 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140509212 chr9:140509226 nonsynonymous SNV 0.990 2 35 hPsi_associated_SNPs_613 0 0 1 0 0 Ribosome 1 0.440506033678213 0.01311206817627 1 hPsi_site_7271 iPseU_CNN:0.01311206817627;iRNA_PseU:1 7272 chr17 29162399 29162399 1 + C G BLCA 29162404 + 29162384 29162424 41 CTTAATGAAAAATGTCTATATGAAGTAGGAAGAGATGATAA CTTAATGAAAAATGTGTATATGAAGTAGGAAGAGATGATAA < 41bp 1 0.0810238148847765 1 0.459481716156006 experiment 1 Functional Loss NA| ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29162404 chr17:29162399 nonsynonymous SNV 0.263 0 16 hPsi_associated_SNPs_614 0 0 1 0 0 chromatin 1 0.440013262920271 1 1 hPsi_site_7272 iPseU_CNN:1;iRNA_PseU:1 7273 chr6 122720937 122720937 1 + G C BLCA 122720923 + 122720903 122720943 41 GCCGGCTTTCCTCAGCAAGCTGTGGACGCTTGTGGAGGAAA GCCGGCTTTCCTCAGCAAGCTGTGGACGCTTGTGCAGGAAA < 41bp 1 0.323918221553243 1 0.992540240287781 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HSF2 ENSG00000025156 CDS Human protein_coding chr6:122720923 chr6:122720937 nonsynonymous SNV 0.997 3 35 hPsi_associated_SNPs_615 0 0 1 0 1 Cytosol 1 0.438491684124753 0.014919519424438 1 hPsi_site_7273 iPseU_CNN:0.014919519424438;iRNA_PseU:1 7274 chr1 215781434 215781434 1 + C T BLCA 215781433 + 215781413 215781453 41 TGATCTCTACTCAGCCAGGTTCTACTCCTTTAGCGTCATTC TGATCTCTACTCAGCCAGGTTTTACTCCTTTAGCGTCATTC < 41bp 1 0.675102977751957 1 0.999487519264221 experiment 0.649794044496086 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215781433 chr1:215781434 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_616 0 0 1 0 2 Ribosome 1 0.611127947834417 0.00102496147155806 0.777744104331166 hPsi_site_7274 iPseU_CNN:0.00102496147155806;iRNA_PseU:0.777744104331166 7275 chr20 47602073 47602073 1 + C T BLCA 47602059 + 47602039 47602079 41 TTGTCTCAGCCCTGCGGACATTCCTAGAAGGTTTCCGCCTA TTGTCTCAGCCCTGCGGACATTCCTAGAAGGTTTTCGCCTA < 41bp 1 0.329455138128433 1 0.999390482902527 experiment 1 Functional Loss NA| ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47602059 chr20:47602073 synonymous SNV . 0 35 hPsi_associated_SNPs_617 0 0 1 0 0 Cytosol 1 0.438718593026039 0.00121903419494607 1 hPsi_site_7275 iPseU_CNN:0.00121903419494607;iRNA_PseU:1 7276 chr11 66392422 66392422 1 + C T BLCA 66392420 + 66392400 66392440 41 GGCTGCCTCTTCCTATGGGGTTCGTGCAGCTGCTTCTTCCT GGCTGCCTCTTCCTATGGGGTTTGTGCAGCTGCTTCTTCCT < 41bp 1 0.670285453538232 1 0.669389843940735 experiment 0.659429092923535 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RBM14 ENSG00000239306 CDS Human protein_coding chr11:66392420 chr11:66392422 nonsynonymous SNV 1.000 4 23 hPsi_associated_SNPs_618 0 0 1 0 0 Nucleus 1 0.438713358922199 0.66122031211853 1 hPsi_site_7276 iPseU_CNN:0.66122031211853;iRNA_PseU:1 7277 chrX 119739341 119739341 1 + G A BLCA 119739324 + 119739304 119739344 41 AACTTCAGTTATTAAGGGTATTAAGAATCAATTGATAGAGC AACTTCAGTTATTAAGGGTATTAAGAATCAATTGATAAAGC < 41bp 1 0.316675140822436 1 0.988581895828247 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MCTS1 ENSG00000232119 CDS Human protein_coding chrX:119739324 chrX:119739341 nonsynonymous SNV 1.000 1 38 hPsi_associated_SNPs_619 0 0 1 0 2 Cytosol 1 0.438718592244122 0.0228362083435061 1 hPsi_site_7277 iPseU_CNN:0.0228362083435061;iRNA_PseU:1 7278 chr2 179365833 179365833 1 + C T BLCA 179365814 + 179365794 179365834 41 CCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTCT CCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTTT < 41bp 1 0.360815362969839 1 0.999940812587738 experiment 1 Functional Loss NA| PLEKHA3 ENSG00000116095 CDS Human protein_coding chr2:179365814 chr2:179365833 synonymous SNV . 0 40 hPsi_associated_SNPs_620 0 0 1 0 2 Ribosome 1 0.590793412953897 0.000118374824523926 0.818413174092206 hPsi_site_7278 iPseU_CNN:0.000118374824523926;iRNA_PseU:0.818413174092206 7279 chr4 17609135 17609135 1 + C G BLCA 17609132 + 17609112 17609152 41 CCAACAAAGATGAAGTTCCCTATCTACGGAAAGGCATGACT CCAACAAAGATGAAGTTCCCTATGTACGGAAAGGCATGACT < 41bp 1 0.586088346980607 1 0.901599824428558 experiment 0.827823306038787 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LAP3 ENSG00000002549 CDS Human protein_coding chr4:17609132 chr4:17609135 nonsynonymous SNV 0.739 2 24 hPsi_associated_SNPs_621 0 0 0 0 0 Ribosome 1 0.438719130136322 0.196800351142884 1 hPsi_site_7279 iPseU_CNN:0.196800351142884;iRNA_PseU:1 7280 chr2 233431865 233431865 1 + A G BLCA 233431858 + 233431838 233431878 41 AGCCCGAATCCGGGACACACTTCGGCGAGTGCTTAACCTAC AGCCCGAATCCGGGACACACTTCGGCGGGTGCTTAACCTAC < 41bp 1 0.645627657540284 1 5.97834587097168e-05 experiment 0.708744684919433 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233431858 chr2:233431865 synonymous SNV . 0 28 hPsi_associated_SNPs_622 0 0 1 0 2 Ribosome 1 0.438865353397606 1 1 hPsi_site_7280 iPseU_CNN:1;iRNA_PseU:1 7281 chr21 38568048 38568048 1 + A T BLCA 38568028 + 38568008 38568048 41 CGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGA CGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGT < 41bp 1 0.168019990869689 1 0.756579756736755 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38568028 chr21:38568048 nonsynonymous SNV 0.038 0 41 hPsi_associated_SNPs_623 0 0 1 0 1 Cytosol 1 0.993389638064811 0.48684048652649 0.0132207238703783 hPsi_site_7281 iPseU_CNN:0.48684048652649;iRNA_PseU:0.0132207238703783 7282 chr2 204116801 204116801 1 + C T BRCA 204116815 + 204116795 204116835 41 CTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGGTA CTGATTTTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGGTA < 41bp 1 0.672667445783574 1 0.98007196187973 experiment 0.654665108432851 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204116815 chr2:204116801 nonsynonymous SNV 0.900 1 7 hPsi_associated_SNPs_629 0 0 1 0 1 Nucleus 1 0.458554150805998 0.03985607624054 1 hPsi_site_7282 iPseU_CNN:0.03985607624054;iRNA_PseU:1 7283 chr7 2409146 2409146 1 + C T BRCA 2409131 + 2409111 2409151 41 TTTTCTTGGTCTCCTGGTGGTAACATAATCGCCTTCTGGGT TTTTCTTGGTCTCCTGGTGGTAACATAATCGCCTTTTGGGT < 41bp 1 0.67675294673114 1 0.988965928554535 experiment 0.646494106537721 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2409131 chr7:2409146 synonymous SNV . 0 36 hPsi_associated_SNPs_630 0 0 1 0 1 Ribosome 1 0.7349001419233 0.02206814289093 0.530199716153401 hPsi_site_7283 iPseU_CNN:0.02206814289093;iRNA_PseU:0.530199716153401 7284 chrX 134125278 134125278 1 + C T BRCA 134125282 + 134125262 134125302 41 TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGCGG TCACGCGCACGCTGCTTACCTTCTTCGACCTGGCCTGGCGG < 41bp 1 0.651557406788909 1 0.998753666877747 experiment 0.696885186422183 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMIM10 ENSG00000184785 CDS Human protein_coding chrX:134125282 chrX:134125278 synonymous SNV . 0 17 hPsi_associated_SNPs_631 0 0 0 0 0 exosome 1 0.442209796398036 0.00249266624450595 1 hPsi_site_7284 iPseU_CNN:0.00249266624450595;iRNA_PseU:1 7285 chr10 51887518 51887518 1 + T G BRCA 51887504 + 51887484 51887524 41 CCCGGGAGTGGGGAGGCCGGTGTGAGTTTTGATCTTCCAGC CCCGGGAGTGGGGAGGCCGGTGTGAGTTTTGATCGTCCAGC < 41bp 1 0.435258077262373 1 0.829378247261047 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WASHC2A ENSG00000099290 CDS Human protein_coding chr10:51887504 chr10:51887518 nonsynonymous SNV 1.000 1 35 hPsi_associated_SNPs_632 0 0 0 0 1 unknown 1 0.438711349229264 0.341243505477906 1 hPsi_site_7285 iPseU_CNN:0.341243505477906;iRNA_PseU:1 7286 chr10 46282632 46282632 1 + T C BRCA 46282644 + 46282624 46282664 41 CCCGGGAGTGGGGAGGCCGGTGTGAGTTTTGATCTTCCAGC CCCGGGAGCGGGGAGGCCGGTGTGAGTTTTGATCTTCCAGC < 41bp 1 0.307923890451334 1 0.998528003692627 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WASHC2C ENSG00000172661 CDS Human protein_coding chr10:46282644 chr10:46282632 synonymous SNV . 0 9 hPsi_associated_SNPs_633 0 0 0 0 1 unknown 1 0.439400831087265 0.00294399261474609 1 hPsi_site_7286 iPseU_CNN:0.00294399261474609;iRNA_PseU:1 7287 chr10 85901316 85901316 1 + T G BRCA 85901298 + 85901278 85901318 41 TGTCTCCGGACACTACCTTCTAGGGTTTTCCACCCAGCTTT TGTCTCCGGACACTACCTTCTAGGGTTTTCCACCCAGCGTT < 41bp 1 0.33346260968499 1 0.99959671497345 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GHITM ENSG00000165678 CDS Human protein_coding chr10:85901298 chr10:85901316 synonymous SNV . 0 39 hPsi_associated_SNPs_634 0 0 1 0 1 Ribosome 1 0.438719111060968 0.00080657005309992 1 hPsi_site_7287 iPseU_CNN:0.00080657005309992;iRNA_PseU:1 7288 chr5 118862855 118862855 1 + G A BRCA 118862835 + 118862815 118862855 41 TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTATATCCAG TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTATATCCAA < 41bp 1 0.157633528524059 1 0.999128401279449 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118862835 chr5:118862855 nonsynonymous SNV 0.999 5 41 hPsi_associated_SNPs_635 0 0 1 0 2 Cytosol 1 0.94873241927652 0.00174319744110196 0.102535161446959 hPsi_site_7288 iPseU_CNN:0.00174319744110196;iRNA_PseU:0.102535161446959 7289 chr11 111414717 111414717 1 + G A BRCA 111414729 + 111414709 111414749 41 TACTTCTCGAAGACTGAACTTTGAGGAAGCCAAAGAAGCCT TACTTCTCAAAGACTGAACTTTGAGGAAGCCAAAGAAGCCT < 41bp 1 0.314585263238668 1 0.99341869354248 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LAYN ENSG00000204381 CDS Human protein_coding chr11:111414729 chr11:111414717 nonsynonymous SNV 0.950 0 9 hPsi_associated_SNPs_636 0 0 1 0 1 exosome 1 0.438721799390871 0.01316261291504 1 hPsi_site_7289 iPseU_CNN:0.01316261291504;iRNA_PseU:1 7290 chr11 47304060 47304060 1 + C T BRCA 47304048 + 47304028 47304068 41 TTTTCAAGCTGGCTCCTTTCTAGCCTCACGTCCCCGGCAGA TTTTCAAGCTGGCTCCTTTCTAGCCTCACGTCTCCGGCAGA < 41bp 1 0.309678750517393 1 0.952153563499451 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47304048 chr11:47304060 nonsynonymous SNV 1.000 4 33 hPsi_associated_SNPs_637 0 0 1 0 0 Nucleus 1 0.438720275720199 0.095692873001098 1 hPsi_site_7290 iPseU_CNN:0.095692873001098;iRNA_PseU:1 7291 chr1 46079800 46079800 1 + G A BRCA 46079797 + 46079777 46079817 41 GAAAATGAGGAGGAGGAGATTGGGAACCTAGAGCTTGCCTG GAAAATGAGGAGGAGGAGATTGGAAACCTAGAGCTTGCCTG < 41bp 1 0.542684062952495 1 0.999215483665466 experiment 0.91463187409501 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NASP ENSG00000132780 CDS Human protein_coding chr1:46079797 chr1:46079800 synonymous SNV . 0 24 hPsi_associated_SNPs_638 0 0 1 0 1 Nucleus 1 0.438715012940039 0.00156903266906805 1 hPsi_site_7291 iPseU_CNN:0.00156903266906805;iRNA_PseU:1 7292 chr20 44045206 44045206 1 + G A BRCA 44045209 + 44045189 44045229 41 GGGCAGCTGATCTCCAAGTATTCTCTACGGGAGCTGCACCT GGGCAGCTGATCTCCAAATATTCTCTACGGGAGCTGCACCT < 41bp 1 0.586708129099226 1 0.99961245059967 experiment 0.826583741801548 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045209 chr20:44045206 synonymous SNV . 0 18 hPsi_associated_SNPs_639 0 0 1 0 2 Ribosome 1 0.439417060391702 0.000775098800660068 1 hPsi_site_7292 iPseU_CNN:0.000775098800660068;iRNA_PseU:1 7293 chr19 40883954 40883954 1 + G A BRCA 40883947 + 40883927 40883967 41 GACGGCGGGCACCTCGCTGCTGGTGACGCAGAATGGGAGGG GACGGCGGGCACCTCGCTGCTGGTGACACAGAATGGGAGGG < 41bp 1 0.236051085623733 1 0.878117203712463 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883947 chr19:40883954 synonymous SNV . 0 28 hPsi_associated_SNPs_640 0 0 1 0 1 Endoplasmic reticulum 1 0.466726865855122 0.243765592575074 1 hPsi_site_7293 iPseU_CNN:0.243765592575074;iRNA_PseU:1 7294 chr1 107599767 107599767 1 + G C BRCA 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACGTCCTGCCGGGACCAGTGGAGACTGTACAGTTGCCGG < 41bp 1 0.408416685530202 1 0.998317003250122 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599767 nonsynonymous SNV 0.983 1 32 hPsi_associated_SNPs_641 0 0 1 0 0 Ribosome 1 0.438737252849752 0.00336599349975608 1 hPsi_site_7294 iPseU_CNN:0.00336599349975608;iRNA_PseU:1 7295 chr20 62658961 62658961 1 + G A BRCA 62658974 + 62658954 62658994 41 AGTTGAAGAAGTGTCCCCACTCCACACCCCTGTGGCTTTTG AGTTGAAAAAGTGTCCCCACTCCACACCCCTGTGGCTTTTG < 41bp 1 0.203937805119535 1 0.998153805732727 experiment 1 Functional Loss NA| PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62658974 chr20:62658961 synonymous SNV . 0 8 hPsi_associated_SNPs_642 0 0 0 0 1 Cytosol 1 0.724642725077446 0.0036923885345459 0.550714549845107 hPsi_site_7295 iPseU_CNN:0.0036923885345459;iRNA_PseU:0.550714549845107 7296 chr17 38140605 38140605 1 + C T BRCA 38140603 + 38140583 38140623 41 TTTCAGGCAAGGAGCCGAGATTCGTGCTGCGGGCCCTGCGG TTTCAGGCAAGGAGCCGAGATTTGTGCTGCGGGCCCTGCGG < 41bp 1 0.542193229021009 1 0.980782032012939 experiment 0.915613541957983 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38140603 chr17:38140605 synonymous SNV . 0 23 hPsi_associated_SNPs_643 0 0 1 0 2 Ribosome 1 0.438718524263667 0.038435935974122 1 hPsi_site_7296 iPseU_CNN:0.038435935974122;iRNA_PseU:1 7297 chr7 105187507 105187507 1 + A T BRCA 105187492 + 105187472 105187512 41 GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAAAATTCT GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAATATTCT < 41bp 1 0.672287740371093 1 0.999999284744263 experiment 0.655424519257813 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RINT1 ENSG00000135249 CDS Human protein_coding chr7:105187492 chr7:105187507 nonsynonymous SNV 1.000 2 36 hPsi_associated_SNPs_644 0 0 1 0 1 Nucleus 1 0.999992949075551 1.43051147394324e-06 1.41018488972744e-05 hPsi_site_7297 iPseU_CNN:1.43051147394324e-06;iRNA_PseU:1.41018488972744e-05 7298 chr2 32445456 32445456 1 + T G BRCA 32445455 + 32445435 32445475 41 GCAGCCAATGTCCTAAACTTTTCAGATCATCACGTAATCCC GCAGCCAATGTCCTAAACTTTGCAGATCATCACGTAATCCC < 41bp 1 0.689390039105294 1 0.950033962726593 experiment 0.621219921789413 Functional Loss NA| SLC30A6 ENSG00000152683 CDS Human protein_coding chr2:32445455 chr2:32445456 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_646 0 0 1 0 0 Ribosome 1 0.43871421653821 0.099932074546814 1 hPsi_site_7298 iPseU_CNN:0.099932074546814;iRNA_PseU:1 7299 chr2 27598788 27598788 1 + T A BRCA 27598782 + 27598762 27598802 41 AGGTGCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAG AGGTGCGCCTGGAACTGGCTTTTGAAAACCTCATGAGCAAG < 41bp 1 0.607843673651438 1 0.999881267547607 experiment 0.784312652697123 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SNX17 ENSG00000115234 CDS Human protein_coding chr2:27598782 chr2:27598788 nonsynonymous SNV 1.000 4 27 hPsi_associated_SNPs_647 0 0 0 2 2 Ribosome 1 0.438647535067981 0.000237464904786044 1 hPsi_site_7299 iPseU_CNN:0.000237464904786044;iRNA_PseU:1 7300 chr15 45335550 45335550 1 + A G BRCA 45335570 + 45335550 45335590 41 ATGGTGCTGGGACATGAAGCTTCGGGAACAGTCGAAAAAGT GTGGTGCTGGGACATGAAGCTTCGGGAACAGTCGAAAAAGT < 41bp 1 0.609050686320338 1 0.987086057662964 experiment 0.781898627359323 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SORD ENSG00000140263 CDS Human protein_coding chr15:45335570 chr15:45335550 nonsynonymous SNV 0.994 4 1 hPsi_associated_SNPs_648 0 0 0 0 2 Ribosome 1 0.981599350003281 0.025827884674072 0.0368012999934384 hPsi_site_7300 iPseU_CNN:0.025827884674072;iRNA_PseU:0.0368012999934384 7301 chrX 123211834 123211834 1 + A G BRCA 123211815 + 123211795 123211835 41 ATTTCTTTATAGTATTATAATGACTATGGAGATATCATCAA ATTTCTTTATAGTATTATAATGACTATGGAGATATCATCGA < 41bp 1 0.0935621485660884 1 0.994812965393066 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide STAG2 ENSG00000101972 CDS Human protein_coding chrX:123211815 chrX:123211834 nonsynonymous SNV 1.000 4 40 hPsi_associated_SNPs_649 0 0 1 0 2 Nucleus 1 0.438718598794225 0.0103740692138681 1 hPsi_site_7301 iPseU_CNN:0.0103740692138681;iRNA_PseU:1 7302 chr21 45499985 45499985 1 + C T BRCA 45499973 + 45499953 45499993 41 CAAGCACTTCTGCCAGGAGATACTTGACTTTGCCAGCCAGC CAAGCACTTCTGCCAGGAGATACTTGACTTTGTCAGCCAGC < 41bp 1 0.492716507618136 1 0.995896339416504 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45499973 chr21:45499985 nonsynonymous SNV 0.480 1 33 hPsi_associated_SNPs_650 0 0 1 0 2 Cytosol 1 0.603728188233079 0.00820732116699197 0.792543623533842 hPsi_site_7302 iPseU_CNN:0.00820732116699197;iRNA_PseU:0.792543623533842 7303 chr6 25973465 25973465 1 + G T BRCA 25973477 + 25973457 25973497 41 TGTGCAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATG TGTGCAATTTTTCCAAGCTTTACTTCGATGTGAAGAAAATG < 41bp 1 0.277986786103663 1 0.996122658252716 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25973477 chr6:25973465 nonsynonymous SNV 0.007 2 9 hPsi_associated_SNPs_651 0 0 1 0 1 Cytosol 1 0.438835880603862 0.00775468349456809 1 hPsi_site_7303 iPseU_CNN:0.00775468349456809;iRNA_PseU:1 7304 chr9 141071078 141071078 1 + A G BRCA 141071074 + 141071054 141071094 41 CTGAACCACCTGGTGTCTGCTACCATGAGTGGGGTCACCAC CTGAACCACCTGGTGTCTGCTACCGTGAGTGGGGTCACCAC < 41bp 1 0.267187153714843 1 0.999773025512695 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TUBBP5 ENSG00000159247 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:141071074 chr9:141071078 . . 0 25 hPsi_associated_SNPs_652 0 0 0 0 0 unknown 1 0.438681858184705 0.000453948974610041 1 hPsi_site_7304 iPseU_CNN:0.000453948974610041;iRNA_PseU:1 7305 chr12 6971685 6971685 1 + G T BRCA 6971692 + 6971672 6971712 41 TCCAGATCAAGAAGTTCACCTTCGGCTTAGACTGGGTGCCC TCCAGATCAAGAATTTCACCTTCGGCTTAGACTGGGTGCCC < 41bp 1 0.148688721204736 1 0.994517087936401 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6971692 chr12:6971685 nonsynonymous SNV 1.000 4 14 hPsi_associated_SNPs_653 0 0 1 0 2 Nucleus 1 0.438718317957764 0.0109658241271979 1 hPsi_site_7305 iPseU_CNN:0.0109658241271979;iRNA_PseU:1 7306 chr16 69969793 69969793 1 + C T BRCA 69969800 + 69969780 69969820 41 GACACGGGCTTCACCCTCCCTTTCTACAAGCGGATGCTCAA GACACGGGCTTCATCCTCCCTTTCTACAAGCGGATGCTCAA < 41bp 1 0.262352131325092 1 0.999299287796021 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WWP2 ENSG00000198373 CDS Human protein_coding chr16:69969800 chr16:69969793 nonsynonymous SNV 1.000 3 14 hPsi_associated_SNPs_654 0 0 1 0 2 Ribosome 1 0.747792993356551 0.0014014244079581 0.504414013286898 hPsi_site_7306 iPseU_CNN:0.0014014244079581;iRNA_PseU:0.504414013286898 7307 chr10 126655277 126655277 1 + A T BRCA 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGCTTGCTGAATCGTCCTTCTGCCTTTGTTGTTGGCTA < 41bp 1 0.179807590988555 1 0.999471604824066 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655277 nonsynonymous SNV 1.000 3 32 hPsi_associated_SNPs_655 0 0 1 0 1 Ribosome 1 0.438645280953749 0.0010567903518679 1 hPsi_site_7307 iPseU_CNN:0.0010567903518679;iRNA_PseU:1 7308 chr2 228221826 228221826 1 + G C CESC 228221822 + 228221802 228221842 41 TGCTTAATAGCTGGCTCTGGTTTCGCCGCTAGAGGTAACAT TGCTTAATAGCTGGCTCTGGTTTCCCCGCTAGAGGTAACAT < 41bp 1 0.537216448153152 1 0.975322246551514 experiment 0.925567103693697 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFF ENSG00000168958 CDS Human protein_coding chr2:228221822 chr2:228221826 nonsynonymous SNV 0.998 4 25 hPsi_associated_SNPs_656 0 0 1 0 0 Cytosol 1 0.438718595451381 0.049355506896972 1 hPsi_site_7308 iPseU_CNN:0.049355506896972;iRNA_PseU:1 7309 chr7 100470816 100470816 1 + C T CESC 100470817 + 100470797 100470837 41 TGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCTG TGTGGGCTGCTGCTCTCCTTTGAGGGCGAGTGTCAGGGCTG < 41bp 1 0.339875742115012 1 0.964015960693359 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470817 chr7:100470816 nonsynonymous SNV 0.996 5 20 hPsi_associated_SNPs_658 0 0 1 0 1 Ribosome 1 0.438409718657119 0.0719680786132819 1 hPsi_site_7309 iPseU_CNN:0.0719680786132819;iRNA_PseU:1 7310 chr2 207425883 207425883 1 + C G CESC 207425894 + 207425874 207425914 41 AGAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC AGAAGCAGTGTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC < 41bp 1 0.410319184263203 1 0.345001369714737 experiment 1 Functional Loss NA| ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207425894 chr2:207425883 nonsynonymous SNV 0.999 1 10 hPsi_associated_SNPs_659 0 0 1 0 2 Ribosome 1 0.440260556581547 1 1 hPsi_site_7310 iPseU_CNN:1;iRNA_PseU:1 7311 chr5 170818351 170818351 1 + G A CESC 170818349 + 170818329 170818369 41 AAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATT AAAGGATGAGTTGCACATTGTTAAAGCAGAGGCAATGAATT < 41bp 1 0.452680799857188 1 0.997087240219116 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NPM1 ENSG00000181163 CDS Human protein_coding chr5:170818349 chr5:170818351 nonsynonymous SNV 0.999 3 23 hPsi_associated_SNPs_660 0 0 1 0 2 Ribosome 1 0.56127830364424 0.00582551956176802 0.877443392711519 hPsi_site_7311 iPseU_CNN:0.00582551956176802;iRNA_PseU:0.877443392711519 7312 chr22 20759866 20759866 1 + C G CESC 20759850 + 20759830 20759870 41 CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTCAGGT CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTGAGGT < 41bp 1 0.536798845785458 1 0.999602496623993 experiment 0.926402308429083 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20759850 chr22:20759866 nonsynonymous SNV 0.000 1 37 hPsi_associated_SNPs_661 0 0 0 0 0 Cytosol 1 0.442652889754172 0.000795006752013938 1 hPsi_site_7312 iPseU_CNN:0.000795006752013938;iRNA_PseU:1 7313 chr21 34929519 34929519 1 + C A CESC 34929531 + 34929511 34929551 41 TGCTAAGGCTGGTGTCCCTTTACCACCAAACCTAAAGCCTG TGCTAAGGATGGTGTCCCTTTACCACCAAACCTAAAGCCTG < 41bp 1 0.693301912255051 1 0.9999960064888 experiment 0.613396175489898 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SON ENSG00000159140 CDS Human protein_coding chr21:34929531 chr21:34929519 nonsynonymous SNV 1.000 4 9 hPsi_associated_SNPs_663 0 0 1 0 1 Nucleus 1 0.438719976508124 7.98702239990234e-06 1 hPsi_site_7313 iPseU_CNN:7.98702239990234e-06;iRNA_PseU:1 7314 chr10 102763798 102763798 1 + C T CESC 102763812 + 102763792 102763832 41 CCACCCCCGCCTCCACCTCCTTCGGATGAGGCCCTGCTGCA CCACCCTCGCCTCCACCTCCTTCGGATGAGGCCCTGCTGCA < 41bp 1 0.678049309622677 1 0.999639511108398 experiment 0.643901380754646 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763812 chr10:102763798 nonsynonymous SNV 0.017 0 7 hPsi_associated_SNPs_665 0 0 1 0 0 Ribosome 1 0.444593195567018 0.000720977783204013 1 hPsi_site_7314 iPseU_CNN:0.000720977783204013;iRNA_PseU:1 7315 chr1 230371767 230371767 1 + C T CESC 230371783 + 230371763 230371803 41 TCAGCGGAAGCAGTGGCGGGTGGATCTGCCGGCCACCAGCG TCAGTGGAAGCAGTGGCGGGTGGATCTGCCGGCCACCAGCG < 41bp 1 0.478341004337414 1 0.981226921081543 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371783 chr1:230371767 nonsynonymous SNV 0.999 3 5 hPsi_associated_SNPs_666 0 0 1 0 2 Endoplasmic reticulum 1 0.45676658982022 0.0375461578369141 1 hPsi_site_7315 iPseU_CNN:0.0375461578369141;iRNA_PseU:1 7316 chr11 126126634 126126634 1 + G A CESC 126126631 + 126126611 126126651 41 CGTAGATGAGTTCAAAAAGCTTCGAGAAAACATGCTGGACA CGTAGATGAGTTCAAAAAGCTTCAAGAAAACATGCTGGACA < 41bp 1 0.698815199097731 1 0.993955254554749 experiment 0.602369601804538 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAM118B ENSG00000197798 CDS Human protein_coding chr11:126126631 chr11:126126634 nonsynonymous SNV 0.998 3 24 hPsi_associated_SNPs_667 0 0 0 0 0 Ribosome 1 0.432091724050801 0.012089490890502 1 hPsi_site_7316 iPseU_CNN:0.012089490890502;iRNA_PseU:1 7317 chr1 183072700 183072700 1 + A G CESC 183072710 + 183072690 183072730 41 ACTGGGGGCAACGTGGCCTTTTCTACCCTGGAAGGAAGGCC ACTGGGGGCAGCGTGGCCTTTTCTACCCTGGAAGGAAGGCC < 41bp 1 0.677141031587529 1 0.818110704421997 experiment 0.645717936824943 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183072710 chr1:183072700 nonsynonymous SNV 0.986 3 11 hPsi_associated_SNPs_668 0 0 1 0 1 Ribosome 1 0.441577318677558 0.363778591156006 1 hPsi_site_7317 iPseU_CNN:0.363778591156006;iRNA_PseU:1 7318 chr2 73474937 73474937 1 + C T CESC 73474929 + 73474909 73474949 41 GTGTTGCATTCAAGAAGACTTTCTCTTACGCTGGGTTTGAA GTGTTGCATTCAAGAAGACTTTCTCTTATGCTGGGTTTGAA < 41bp 1 0.506713122670449 1 0.999982714653015 experiment 0.986573754659101 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73474929 chr2:73474937 synonymous SNV . 0 29 hPsi_associated_SNPs_669 0 0 1 0 1 Cytosol 1 0.853597842897491 3.45706939699486e-05 0.292804314205019 hPsi_site_7318 iPseU_CNN:3.45706939699486e-05;iRNA_PseU:0.292804314205019 7319 chr2 211532923 211532923 1 + G A CESC 211532930 + 211532910 211532950 41 GTGGCTTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA GTGGCTTGCTTTGATGAAGGTATTCATACAGCCTTCCTAAA < 41bp 1 0.690250631988051 1 0.999432861804962 experiment 0.619498736023897 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211532930 chr2:211532923 nonsynonymous SNV 0.996 4 14 hPsi_associated_SNPs_670 0 0 1 0 2 Nucleus 1 0.438770011237461 0.00113427639007591 1 hPsi_site_7319 iPseU_CNN:0.00113427639007591;iRNA_PseU:1 7320 chr11 489419 489419 1 + G A CESC 489437 + 489417 489457 41 TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG TCACCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG < 41bp 1 0.676542258883203 1 0.99998152256012 experiment 0.646915482233594 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489437 chr11:489419 nonsynonymous SNV 0.986 1 3 hPsi_associated_SNPs_672 0 0 1 0 2 Ribosome 1 0.974140207636392 3.69548797600761e-05 0.0517195847272158 hPsi_site_7320 iPseU_CNN:3.69548797600761e-05;iRNA_PseU:0.0517195847272158 7321 chr19 49464253 49464253 1 + C G CESC 49464272 + 49464252 49464292 41 TCCTCTGGGACCCTGGGCCTTCTGGAGCAGGTCACAGTGGT TGCTCTGGGACCCTGGGCCTTCTGGAGCAGGTCACAGTGGT < 41bp 1 0.491960027421034 1 0.99850207567215 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BAX ENSG00000087088 CDS Human protein_coding chr19:49464272 chr19:49464253 nonsynonymous SNV 0.266 0 2 hPsi_associated_SNPs_673 0 0 1 0 0 Cytosol 1 0.438967020926389 0.00299584865570002 1 hPsi_site_7321 iPseU_CNN:0.00299584865570002;iRNA_PseU:1 7322 chr16 30745838 30745838 1 + G C CESC 30745848 + 30745828 30745868 41 AGAGCTGTTTGATATGCCCCTGGAGGAACCTTCTAGCTCAT AGAGCTGTTTCATATGCCCCTGGAGGAACCTTCTAGCTCAT < 41bp 1 0.502713664273259 1 0.0820291936397552 experiment 0.994572671453482 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SRCAP ENSG00000080603 CDS Human protein_coding chr16:30745848 chr16:30745838 nonsynonymous SNV 1.000 4 11 hPsi_associated_SNPs_674 0 0 1 0 2 Ribosome 1 0.440493009705725 1 1 hPsi_site_7322 iPseU_CNN:1;iRNA_PseU:1 7323 chr1 36752685 36752685 1 + C G CESC 36752689 + 36752669 36752709 41 ACATCCCAGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA ACATCCCAGATGGGCTGAACTCTGCCGAGTGGTGCCGGGTA < 41bp 1 0.44536512373996 1 0.988983511924744 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752689 chr1:36752685 stopgain 0.708 1 17 hPsi_associated_SNPs_675 0 0 1 0 0 Nucleus 1 0.439138960782198 0.022032976150512 1 hPsi_site_7323 iPseU_CNN:0.022032976150512;iRNA_PseU:1 7324 chr1 156314403 156314403 1 + C T CESC 156314408 + 156314388 156314428 41 GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCTCCCCCAG GCTAATGCTGTGCCTTTCTGTAGAGCAAAACCCTCCCCCAG < 41bp 1 0.37198416488021 1 0.999142706394196 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSACC ENSG00000163467 CDS Human protein_coding chr1:156314408 chr1:156314403 nonsynonymous SNV 0.722 0 16 hPsi_associated_SNPs_677 0 0 0 0 2 chromatin 1 0.438718592996647 0.001714587211608 1 hPsi_site_7324 iPseU_CNN:0.001714587211608;iRNA_PseU:1 7325 chr19 46198872 46198872 1 + G A CESC 46198863 + 46198843 46198883 41 GCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC GCCATTATGACTCGAAGCTCTTCCCACCCAGATCGACCCCC < 41bp 1 0.612664622017407 1 0.00819045305252075 experiment 0.774670755965187 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198863 chr19:46198872 nonsynonymous SNV 0.016 1 30 hPsi_associated_SNPs_678 0 0 1 0 0 chromatin 1 0.43871864449836 1 1 hPsi_site_7325 iPseU_CNN:1;iRNA_PseU:1 7326 chr19 46198873 46198873 1 + G T CESC 46198863 + 46198843 46198883 41 GCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC GCCATTATGACTCGAAGCTCTTCCCACCCGTATCGACCCCC < 41bp 1 0.626620958852163 1 0.0291690826416016 experiment 0.746758082295675 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198863 chr19:46198873 nonsynonymous SNV 0.011 1 31 hPsi_associated_SNPs_679 0 0 1 0 0 chromatin 1 0.438743527697678 1 1 hPsi_site_7326 iPseU_CNN:1;iRNA_PseU:1 7327 chr12 113714774 113714774 1 + C T CESC 113714773 + 113714753 113714793 41 TGACATTGAGAAACGCAAGTTCAAGTCTTTGCTACTGCACA TGACATTGAGAAACGCAAGTTTAAGTCTTTGCTACTGCACA < 41bp 1 0.53462567801808 1 0.996067881584167 experiment 0.93074864396384 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113714773 chr12:113714774 synonymous SNV . 0 22 hPsi_associated_SNPs_680 0 0 0 0 1 chromatin 1 0.670611411717131 0.00786423683166593 0.658777176565739 hPsi_site_7327 iPseU_CNN:0.00786423683166593;iRNA_PseU:0.658777176565739 7328 chr17 73820444 73820444 1 + G C CESC 73820434 + 73820414 73820454 41 ACACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT ACACGCTGCGCTGTGTGAGCTCTGCGCTGACGGCAGCGAGT < 41bp 1 0.223444316127738 1 0.999890446662903 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNK ENSG00000132478 CDS Human protein_coding chr17:73820434 chr17:73820444 nonsynonymous SNV 0.996 0 31 hPsi_associated_SNPs_681 0 0 1 0 0 Cytosol 1 0.572248882273347 0.000219106674193892 0.855502235453305 hPsi_site_7328 iPseU_CNN:0.000219106674193892;iRNA_PseU:0.855502235453305 7329 chr17 55191897 55191897 1 + G A CESC 55191886 + 55191866 55191906 41 AGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACAC AGGTCAATGCCGGGCACCTGTTCGTGCAGCAACACACACAC < 41bp 1 0.553935986225902 1 0.984736979007721 experiment 0.892128027548196 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55191886 chr17:55191897 synonymous SNV . 0 32 hPsi_associated_SNPs_682 0 0 1 0 1 Endoplasmic reticulum 1 0.704526337936142 0.0305260419845581 0.590947324127715 hPsi_site_7329 iPseU_CNN:0.0305260419845581;iRNA_PseU:0.590947324127715 7330 chr12 104732920 104732920 1 + C T CESC 104732933 + 104732913 104732953 41 TTAGGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG TTAGGAATGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG < 41bp 1 0.544661564454723 1 0.999918162822723 experiment 0.910676871090554 Functional Loss NA| TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732933 chr12:104732920 nonsynonymous SNV 1.000 5 8 hPsi_associated_SNPs_683 0 0 1 0 1 Ribosome 1 0.989689401602312 0.000163674354554111 0.0206211967953764 hPsi_site_7330 iPseU_CNN:0.000163674354554111;iRNA_PseU:0.0206211967953764 7331 chr10 102675791 102675791 1 + C G CESC 102675775 + 102675755 102675795 41 GGAAGCAGTCAATTATAGATTTCTTCAAACCAGCTTCAAAA GGAAGCAGTCAATTATAGATTTCTTCAAACCAGCTTGAAAA < 41bp 1 0.509264135760817 1 0.939793705940247 experiment 0.981471728478366 Functional Loss NA| SLF2 ENSG00000119906 CDS Human protein_coding chr10:102675775 chr10:102675791 stopgain 0.998 0 37 hPsi_associated_SNPs_685 0 0 1 0 2 Nucleus 1 0.439066279304981 0.120412588119506 1 hPsi_site_7331 iPseU_CNN:0.120412588119506;iRNA_PseU:1 7332 chr14 24429148 24429148 1 + C G CESC 24429131 + 24429111 24429151 41 GCTGTGAAGCTTCATGGAGGTATCGATATCCTAGTCTCCAA GCTGTGAAGCTTCATGGAGGTATCGATATCCTAGTCTGCAA < 41bp 1 0.668569139353891 1 0.999927639961243 experiment 0.662861721292218 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHRS4 ENSG00000157326 CDS Human protein_coding chr14:24429131 chr14:24429148 nonsynonymous SNV 0.992 1 38 hPsi_associated_SNPs_686 0 0 1 0 2 Ribosome 1 0.43869603116045 0.000144720077513982 1 hPsi_site_7332 iPseU_CNN:0.000144720077513982;iRNA_PseU:1 7333 chr7 2284330 2284330 1 + G C CESC 2284313 + 2284293 2284333 41 GGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAG GGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAACAAG < 41bp 1 0.407694720142677 1 0.996932983398438 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NUDT1 ENSG00000106268 CDS Human protein_coding chr7:2284313 chr7:2284330 nonsynonymous SNV 0.989 0 38 hPsi_associated_SNPs_687 0 0 1 0 1 Ribosome 1 0.438722665182321 0.00613403320312389 1 hPsi_site_7333 iPseU_CNN:0.00613403320312389;iRNA_PseU:1 7334 chr6 5431307 5431307 1 + C A CESC 5431310 + 5431290 5431330 41 GGTAGACTGCTACTTCCCTTTTACACATCCTTCCTTTGAGA GGTAGACTGCTACTTCCATTTTACACATCCTTCCTTTGAGA < 41bp 1 0.402726099761239 1 0.997718811035156 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FARS2 ENSG00000145982 CDS Human protein_coding chr6:5431310 chr6:5431307 nonsynonymous SNV 0.981 4 18 hPsi_associated_SNPs_688 0 0 1 0 2 Ribosome 1 0.438718592587302 0.00456237792968794 1 hPsi_site_7334 iPseU_CNN:0.00456237792968794;iRNA_PseU:1 7335 chr7 142962228 142962228 1 + G A CESC 142962241 + 142962221 142962261 41 CTTGGATGACTTTCTGACCTTCCCCAGGCACGTTTTCAGGG CTTGGATAACTTTCTGACCTTCCCCAGGCACGTTTTCAGGG < 41bp 1 0.112584730914208 1 0.901571333408356 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962241 chr7:142962228 nonsynonymous SNV 0.000 0 8 hPsi_associated_SNPs_689 0 0 1 0 1 Endoplasmic reticulum 1 0.461949104514877 0.196857333183288 1 hPsi_site_7335 iPseU_CNN:0.196857333183288;iRNA_PseU:1 7336 chr14 21464426 21464426 1 + C T CESC 21464416 + 21464396 21464436 41 TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC TGACCAACCTGGCCTGTAGCTTCTCACAGGTGTACCATCCC < 41bp 1 0.228618923634953 1 0.999752759933472 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464416 chr14:21464426 nonsynonymous SNV 0.787 0 31 hPsi_associated_SNPs_690 0 0 1 0 1 Ribosome 1 0.506825208481864 0.000494480133055974 0.986349583036271 hPsi_site_7336 iPseU_CNN:0.000494480133055974;iRNA_PseU:0.986349583036271 7337 chr12 101683921 101683921 1 + G C CESC 101683941 + 101683921 101683961 41 GATAAAAACGCACTTTTCAATTTAATGTTTCTTGATCTTGA CATAAAAACGCACTTTTCAATTTAATGTTTCTTGATCTTGA < 41bp 1 0.136614166403105 1 0.986747801303864 experiment 1 Functional Loss NA| UTP20 ENSG00000120800 CDS Human protein_coding chr12:101683941 chr12:101683921 nonsynonymous SNV 0.965 4 1 hPsi_associated_SNPs_691 0 0 0 0 1 Cytosol 1 0.460400839053568 0.0265043973922721 1 hPsi_site_7337 iPseU_CNN:0.0265043973922721;iRNA_PseU:1 7338 chrX 100646524 100646524 1 + G A CESC 100646506 + 100646486 100646526 41 TGTGGCAAGCACCAACCCCATAAAGTGACACAGTACAAGAA TGTGGCAAGCACCAACCCCATAAAGTGACACAGTACAAAAA < 41bp 1 0.203782360300671 1 0.00429975986480713 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646506 chrX:100646524 synonymous SNV . 0 39 hPsi_associated_SNPs_692 0 0 1 0 1 unknown 1 0.613589105730753 1 0.772821788538494 hPsi_site_7338 iPseU_CNN:1;iRNA_PseU:0.772821788538494 7339 chr21 45499971 45499971 1 + G A CESC 45499973 + 45499953 45499993 41 CAAGCACTTCTGCCAGGAGATACTTGACTTTGCCAGCCAGC CAAGCACTTCTGCCAGGAAATACTTGACTTTGCCAGCCAGC < 41bp 1 0.152852925949496 1 0.999920248985291 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45499973 chr21:45499971 synonymous SNV . 0 19 hPsi_associated_SNPs_693 0 0 1 0 2 Cytosol 1 0.438741550199827 0.000159502029418057 1 hPsi_site_7339 iPseU_CNN:0.000159502029418057;iRNA_PseU:1 7340 chr11 68369359 68369359 1 + C T CESC 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACAAAAGATTCTTTAAGGAGTAATTCTTCAGTGGAAATGGA < 41bp 1 0.232606554297879 1 0.418530941009521 experiment 1 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369359 nonsynonymous SNV 0.985 4 28 hPsi_associated_SNPs_694 0 0 1 0 2 Nucleus 1 0.440992072348494 1 1 hPsi_site_7340 iPseU_CNN:1;iRNA_PseU:1 7341 chrX 119007294 119007294 1 + C A CESC 119007286 + 119007266 119007306 41 GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGGAGTCTGA GGAAAAAAGGGTTGCTCATTTTGGGTATAACTGGAGTCTGA < 41bp 1 0.165275288194714 1 0.75644314289093 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007286 chrX:119007294 nonsynonymous SNV 0.000 1 29 hPsi_associated_SNPs_695 0 0 1 0 2 Ribosome 1 0.438718578603154 0.48711371421814 1 hPsi_site_7341 iPseU_CNN:0.48711371421814;iRNA_PseU:1 7342 chr5 61822025 61822025 1 + G A CESC 61822034 + 61822014 61822054 41 GTTATTCAACTGAGTACAGATGTTTCACAGCCTCCACATGT GTTATTCAACTAAGTACAGATGTTTCACAGCCTCCACATGT < 41bp 1 0.0511380664547595 1 0.99832546710968 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock IPO11 ENSG00000086200 CDS Human protein_coding chr5:61822034 chr5:61822025 synonymous SNV . 0 12 hPsi_associated_SNPs_696 0 0 1 0 2 Ribosome 1 0.58279748740552 0.00334906578064009 0.834405025188959 hPsi_site_7342 iPseU_CNN:0.00334906578064009;iRNA_PseU:0.834405025188959 7343 chr2 54014459 54014459 1 + A C CESC 54014448 + 54014428 54014468 41 GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACA GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCCGCGATGACA < 41bp 1 0.149623716971566 1 0.983600556850433 experiment 1 Functional Loss NA| ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014448 chr2:54014459 nonsynonymous SNV 0.955 2 32 hPsi_associated_SNPs_697 0 0 1 0 1 Endoplasmic reticulum 1 0.438742572528516 0.032798886299134 1 hPsi_site_7343 iPseU_CNN:0.032798886299134;iRNA_PseU:1 7344 chr1 163317606 163317606 1 + G A CESC 163317621 + 163317601 163317641 41 AAATTGAAGACTGAAGAAAATTCGTTCAAAAGACTGATGAT AAATTAAAGACTGAAGAAAATTCGTTCAAAAGACTGATGAT < 41bp 1 0.152204355123691 1 0.266979455947876 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163317621 chr1:163317606 synonymous SNV . 0 6 hPsi_associated_SNPs_698 0 0 1 0 1 Cytosol 1 0.554341425806827 1 0.891317148386346 hPsi_site_7344 iPseU_CNN:1;iRNA_PseU:0.891317148386346 7345 chr14 92597343 92597343 1 + C G CESC 92597340 + 92597320 92597360 41 CCAAAAAAAATGACGTCTATTATCAAATTAACTACCCTTTC CCAAAAAAAATGACGTCTATTATGAAATTAACTACCCTTTC < 41bp 1 0.180304054851348 1 0.0659599006175995 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CPSF2 ENSG00000165934 CDS Human protein_coding chr14:92597340 chr14:92597343 nonsynonymous SNV 0.999 4 24 hPsi_associated_SNPs_699 0 0 1 0 1 Ribosome 1 0.438793486554727 1 1 hPsi_site_7345 iPseU_CNN:1;iRNA_PseU:1 7346 chr16 1877711 1877711 1 + G A CESC 1877730 + 1877710 1877750 41 TGAGACATCCTCCATGATTTTTTCCATCCCCTACATCATCA TAAGACATCCTCCATGATTTTTTCCATCCCCTACATCATCA < 41bp 1 0.205811318903466 1 0.997151374816895 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877730 chr16:1877711 nonsynonymous SNV 0.976 1 2 hPsi_associated_SNPs_700 0 0 0 0 0 Ribosome 1 0.482943180323953 0.00569725036621005 1 hPsi_site_7346 iPseU_CNN:0.00569725036621005;iRNA_PseU:1 7347 chr15 80988091 80988091 1 + C G CESC 80988098 + 80988078 80988118 41 AGCTGGACGCCGTCGAGGTCTTCTTCTCGCGCACGGCCCGG AGCTGGACGCCGTGGAGGTCTTCTTCTCGCGCACGGCCCGG < 41bp 1 0.256368126962567 1 0.999908447265625 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ABHD17C ENSG00000136379 CDS Human protein_coding chr15:80988098 chr15:80988091 synonymous SNV . 0 14 hPsi_associated_SNPs_701 0 0 0 0 0 exosome 1 0.438726387421201 0.00018310546875 1 hPsi_site_7347 iPseU_CNN:0.00018310546875;iRNA_PseU:1 7348 chr17 73820430 73820430 1 + G C CESC 73820434 + 73820414 73820454 41 ACACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT ACACGCTGCGCTGTGTCAGCTCTGCGCTGAGGGCAGCGAGT < 41bp 1 0.0845269597719352 1 0.949821352958679 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNK ENSG00000132478 CDS Human protein_coding chr17:73820434 chr17:73820430 nonsynonymous SNV 0.987 3 17 hPsi_associated_SNPs_702 0 0 1 0 1 Cytosol 1 0.440293056989524 0.100357294082642 1 hPsi_site_7348 iPseU_CNN:0.100357294082642;iRNA_PseU:1 7349 chr17 66247275 66247275 1 + G C CESC 66247266 + 66247246 66247286 41 GGGAATAACAATGATTGATCTTTACCCAAGAGACTCGTGGA GGGAATAACAATGATTGATCTTTACCCAACAGACTCGTGGA < 41bp 1 0.199964045007366 1 0.999938428401947 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66247266 chr17:66247275 nonsynonymous SNV 0.994 2 30 hPsi_associated_SNPs_703 0 0 1 0 2 Ribosome 1 0.440248623899631 0.000123143196105957 1 hPsi_site_7349 iPseU_CNN:0.000123143196105957;iRNA_PseU:1 7350 chr17 39973375 39973375 1 + G A CESC 39973390 + 39973370 39973410 41 GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC GGACCAAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC < 41bp 1 0.101841177912645 1 0.999999761581421 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39973390 chr17:39973375 nonsynonymous SNV 0.994 2 6 hPsi_associated_SNPs_704 0 0 1 0 2 Nucleus 1 0.623761577419472 4.7683715798108e-07 0.752476845161057 hPsi_site_7350 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:0.752476845161057 7351 chr17 37815315 37815315 1 + G A CESC 37815318 + 37815298 37815338 41 CTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGG CTGCAGGGTCTGACAATAAATCAGATGAAGAAGTTGCTGGG < 41bp 1 0.0288696832172113 1 0.920573234558105 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815318 chr17:37815315 nonsynonymous SNV 1.000 1 18 hPsi_associated_SNPs_705 0 0 1 0 1 Ribosome 1 0.544930061056116 0.15885353088379 0.910139877887767 hPsi_site_7351 iPseU_CNN:0.15885353088379;iRNA_PseU:0.910139877887767 7352 chr1 29064809 29064809 1 + G A CESC 29064803 + 29064783 29064823 41 CTGTACATCAAAAGGATGGATTAAACGATGATGATTTTGAA CTGTACATCAAAAGGATGGATTAAACAATGATGATTTTGAA < 41bp 1 0.0929642991097776 1 0.958616971969604 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29064803 chr1:29064809 nonsynonymous SNV 0.998 2 27 hPsi_associated_SNPs_706 0 0 1 0 2 Cytosol 1 0.459688146384402 0.0827660560607919 1 hPsi_site_7352 iPseU_CNN:0.0827660560607919;iRNA_PseU:1 7353 chr14 77929015 77929015 1 + G A CESC 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTAACAC < 41bp 1 0.0860004414890888 1 0.996486663818359 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929015 nonsynonymous SNV 1.000 1 37 hPsi_associated_SNPs_707 0 0 1 0 2 Ribosome 1 0.554009830887561 0.00702667236328192 0.891980338224878 hPsi_site_7353 iPseU_CNN:0.00702667236328192;iRNA_PseU:0.891980338224878 7354 chr22 29695785 29695785 1 + G C CESC 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGGCCCCCTGGACCTTTCATGGAACAGATGGGAGG < 41bp 1 0.126569401611418 1 0.996727049350739 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695785 nonsynonymous SNV 1.000 2 24 hPsi_associated_SNPs_708 0 0 1 0 1 Cytosol 1 0.438714726017922 0.00654590129852206 1 hPsi_site_7354 iPseU_CNN:0.00654590129852206;iRNA_PseU:1 7355 chr1 44072039 44072039 1 + G A CESC 44072025 + 44072005 44072045 41 TGCTCCCGGAGACCTTTACCTTGGGGGACAAGAAGAACTAC TGCTCCCGGAGACCTTTACCTTGGGGGACAAGAAAAACTAC < 41bp 1 0.22137249374684 1 0.996962666511536 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PTPRF ENSG00000142949 CDS Human protein_coding chr1:44072025 chr1:44072039 synonymous SNV . 0 35 hPsi_associated_SNPs_709 0 0 1 0 1 Ribosome 1 0.492012629782981 0.00607466697692804 1 hPsi_site_7355 iPseU_CNN:0.00607466697692804;iRNA_PseU:1 7356 chr12 7283279 7283279 1 + C G CESC 7283267 + 7283247 7283287 41 GACCCTCCTGCTGCTGCCCCTTCTGCTGGCCTCTCTGCTCG GACCCTCCTGCTGCTGCCCCTTCTGCTGGCCTGTCTGCTCG < 41bp 1 0.237065705552081 1 0.985158741474152 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7283267 chr12:7283279 nonsynonymous SNV 0.590 1 33 hPsi_associated_SNPs_710 0 0 1 0 1 Endoplasmic reticulum 1 0.438723048121722 0.0296825170516959 1 hPsi_site_7356 iPseU_CNN:0.0296825170516959;iRNA_PseU:1 7357 chr12 124497247 124497247 1 + C A CESC 124497241 + 124497221 124497261 41 GGAAGGCGTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG GGAAGGCGTTCAGTCAGAGTTCGAGCATCTGCATCCACCAG < 41bp 1 0.238265368886198 1 0.977140545845032 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497241 chr12:124497247 nonsynonymous SNV 0.999 3 27 hPsi_associated_SNPs_711 0 0 1 0 0 Nucleus 1 0.438719984641519 0.0457189083099361 1 hPsi_site_7357 iPseU_CNN:0.0457189083099361;iRNA_PseU:1 7358 chr5 74009455 74009455 1 + G T CESC 74009441 + 74009421 74009461 41 GAATTTGATACCCCTGGGCATACACTATCTTGGGGAAAAGG GAATTTGATACCCCTGGGCATACACTATCTTGGGTAAAAGG < 41bp 1 0.187162437612496 1 0.95898711681366 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:74009441 chr5:74009455 nonsynonymous SNV 0.998 5 35 hPsi_associated_SNPs_712 0 0 1 0 1 Cytosol 1 0.438720916408605 0.08202576637268 1 hPsi_site_7358 iPseU_CNN:0.08202576637268;iRNA_PseU:1 7359 chr2 228401373 228401373 1 + C G CESC 228401393 + 228401373 228401413 41 CTGCACAGACACAGCCTGCTTCATCAAGTGTGCCTGCTCCA GTGCACAGACACAGCCTGCTTCATCAAGTGTGCCTGCTCCA < 41bp 1 0.143719752384654 1 0.99910295009613 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228401393 chr2:228401373 nonsynonymous SNV 1.000 2 1 hPsi_associated_SNPs_713 0 0 1 0 2 Cytosol 1 0.486268470279806 0.00179409980773992 1 hPsi_site_7359 iPseU_CNN:0.00179409980773992;iRNA_PseU:1 7360 chr11 65268625 65268625 1 + T G CHOL 65268606 + 65268586 65268626 41 AAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTC AAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTGC < 41bp 1 0.177563378013943 1 0.995409905910492 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268606 chr11:65268625 . . 0 40 hPsi_associated_SNPs_714 0 0 1 1 0 unknown 1 0.442938039580023 0.00918018817901589 1 hPsi_site_7360 iPseU_CNN:0.00918018817901589;iRNA_PseU:1 7361 chr11 65268621 65268621 1 + T C CHOL 65268606 + 65268586 65268626 41 AAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTC AAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTCACTTC < 41bp 1 0.179637043672332 1 0.999843597412109 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268606 chr11:65268621 . . 0 36 hPsi_associated_SNPs_715 0 0 1 1 0 unknown 1 0.552779610358265 0.000312805175781916 0.89444077928347 hPsi_site_7361 iPseU_CNN:0.000312805175781916;iRNA_PseU:0.89444077928347 7362 chr10 116734973 116734973 1 + G A CHOL 116734957 + 116734937 116734977 41 TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAA TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGAACAA < 41bp 1 0.215230069202169 1 0.975801110267639 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116734957 chr10:116734973 stopgain 0.996 1 37 hPsi_associated_SNPs_716 0 0 1 0 1 Ribosome 1 0.441097895819483 0.0483977794647219 1 hPsi_site_7362 iPseU_CNN:0.0483977794647219;iRNA_PseU:1 7363 chr1 161751740 161751740 1 + G T CHOL 161751725 + 161751705 161751745 41 AACAATTTTGATAATCTTGATTTTGATTTGGATTTGATGCC AACAATTTTGATAATCTTGATTTTGATTTGGATTTTATGCC < 41bp 1 0.492734709695748 1 0.985934853553772 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751725 chr1:161751740 nonsynonymous SNV 1.000 2 36 hPsi_associated_SNPs_717 0 0 1 0 2 Endoplasmic reticulum 1 0.438718598464461 0.0281302928924561 1 hPsi_site_7363 iPseU_CNN:0.0281302928924561;iRNA_PseU:1 7364 chr14 64936385 64936385 1 + C A COAD 64936399 + 64936379 64936419 41 AACAATCTTCTACAGTGACTTACTCTCCAGAGTCACGGCAG AACAATATTCTACAGTGACTTACTCTCCAGAGTCACGGCAG < 41bp 1 0.296640623967146 1 0.998289585113525 experiment 1 Functional Loss NA| AKAP5 ENSG00000179841 CDS Human protein_coding chr14:64936399 chr14:64936385 nonsynonymous SNV 0.998 0 7 hPsi_associated_SNPs_718 0 0 1 0 0 Nucleus 1 0.436198684405435 0.00342082977295011 1 hPsi_site_7364 iPseU_CNN:0.00342082977295011;iRNA_PseU:1 7365 chr11 111965564 111965564 1 + G T COAD 111965544 + 111965524 111965564 41 TTTAGGGGCCTTGGACAAGTTGTTACTGACTATGTTCATGG TTTAGGGGCCTTGGACAAGTTGTTACTGACTATGTTCATGT < 41bp 1 0.63054244882926 1 0.000744760036468506 experiment 0.738915102341481 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SDHD ENSG00000204370 CDS Human protein_coding chr11:111965544 chr11:111965564 nonsynonymous SNV 0.914 3 41 hPsi_associated_SNPs_719 0 0 1 0 1 Ribosome 1 0.451044614360488 1 1 hPsi_site_7365 iPseU_CNN:1;iRNA_PseU:1 7366 chr2 152311478 152311478 1 + A C COAD 152311498 + 152311478 152311518 41 AACTTATTGTGAAAGTGATCTATTCTTTCCACACACTGAGC CACTTATTGTGAAAGTGATCTATTCTTTCCACACACTGAGC < 41bp 1 0.35337647576173 1 0.996081829071045 experiment 1 Functional Loss NA| RIF1 ENSG00000080345 CDS Human protein_coding chr2:152311498 chr2:152311478 nonsynonymous SNV 1.000 3 1 hPsi_associated_SNPs_720 0 0 1 0 1 Nucleus 1 0.731921946359297 0.00783634185790993 0.536156107281405 hPsi_site_7366 iPseU_CNN:0.00783634185790993;iRNA_PseU:0.536156107281405 7367 chr1 163317623 163317623 1 + C T COAD 163317621 + 163317601 163317641 41 AAATTGAAGACTGAAGAAAATTCGTTCAAAAGACTGATGAT AAATTGAAGACTGAAGAAAATTTGTTCAAAAGACTGATGAT < 41bp 1 0.274704858739397 1 0.489295959472656 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163317621 chr1:163317623 nonsynonymous SNV 0.949 1 23 hPsi_associated_SNPs_721 0 0 1 0 1 Cytosol 1 0.442300779939698 1 1 hPsi_site_7367 iPseU_CNN:1;iRNA_PseU:1 7368 chr5 79968076 79968076 1 + A G COAD 79968079 + 79968059 79968099 41 TTAGATTGCAGCCCGAGAGCTCAATATTTATTGCCATTTAG TTAGATTGCAGCCCGAGGGCTCAATATTTATTGCCATTTAG < 41bp 1 0.0456447528972891 1 2.89082527160645e-05 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MSH3 ENSG00000113318 CDS Human protein_coding chr5:79968079 chr5:79968076 nonsynonymous SNV 1.000 5 18 hPsi_associated_SNPs_722 0 0 0 0 1 chromatin 1 0.440780412759012 1 1 hPsi_site_7368 iPseU_CNN:1;iRNA_PseU:1 7369 chr1 46079809 46079809 1 + G A COAD 46079797 + 46079777 46079817 41 GAAAATGAGGAGGAGGAGATTGGGAACCTAGAGCTTGCCTG GAAAATGAGGAGGAGGAGATTGGGAACCTAGAACTTGCCTG < 41bp 1 0.0691315616484386 1 0.996525883674622 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NASP ENSG00000132780 CDS Human protein_coding chr1:46079797 chr1:46079809 synonymous SNV . 0 33 hPsi_associated_SNPs_723 0 0 1 0 1 Nucleus 1 0.479744838959469 0.00694823265075595 1 hPsi_site_7369 iPseU_CNN:0.00694823265075595;iRNA_PseU:1 7370 chr14 45542738 45542738 1 + G A COAD 45542732 + 45542712 45542752 41 TCAAAAAGAGTTTGGAGGAATTACTCGATATGACAATTTTA TCAAAAAGAGTTTGGAGGAATTACTCAATATGACAATTTTA < 41bp 1 0.068530118983667 1 0.912760734558105 experiment 1 Functional Loss NA| TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45542732 chr14:45542738 nonsynonymous SNV 0.836 0 27 hPsi_associated_SNPs_724 0 0 0 0 0 unknown 1 0.439466470896371 0.17447853088379 1 hPsi_site_7370 iPseU_CNN:0.17447853088379;iRNA_PseU:1 7371 chr19 9271693 9271693 1 + A G COAD 9271696 + 9271676 9271716 41 GGAAAGCTTTCAGCGCGAGTTCAAACCTCACCGCACACAGG GGAAAGCTTTCAGCGCGGGTTCAAACCTCACCGCACACAGG < 41bp 1 0.646082991652757 1 0.987229704856873 experiment 0.707834016694486 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271696 chr19:9271693 nonsynonymous SNV 0.744 2 18 hPsi_associated_SNPs_725 0 0 1 0 0 Nucleus 1 0.503490151226763 0.025540590286254 0.993019697546473 hPsi_site_7371 iPseU_CNN:0.025540590286254;iRNA_PseU:0.993019697546473 7372 chr5 61822043 61822043 1 + G A COAD 61822034 + 61822014 61822054 41 GTTATTCAACTGAGTACAGATGTTTCACAGCCTCCACATGT GTTATTCAACTGAGTACAGATGTTTCACAACCTCCACATGT < 41bp 1 0.378954673950927 1 0.979449510574341 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock IPO11 ENSG00000086200 CDS Human protein_coding chr5:61822034 chr5:61822043 synonymous SNV . 0 30 hPsi_associated_SNPs_726 0 0 1 0 2 Ribosome 1 0.722706844086443 0.0411009788513179 0.554586311827114 hPsi_site_7372 iPseU_CNN:0.0411009788513179;iRNA_PseU:0.554586311827114 7373 chr11 124829873 124829873 1 + G A COAD 124829879 + 124829859 124829899 41 AAGAGAATCAGAACGAATTATTCCAACAACAAGCCCAGGCT AAGAGAATCAGAACAAATTATTCCAACAACAAGCCCAGGCT < 41bp 1 0.599115560080641 1 0.996906161308289 experiment 0.801768879838719 Functional Loss NA| CCDC15 ENSG00000149548 CDS Human protein_coding chr11:124829879 chr11:124829873 nonsynonymous SNV 0.199 1 15 hPsi_associated_SNPs_727 0 0 0 0 1 chromatin 1 0.438889053481994 0.00618767738342196 1 hPsi_site_7373 iPseU_CNN:0.00618767738342196;iRNA_PseU:1 7374 chr17 42151594 42151594 1 + C A COAD 42151608 + 42151588 42151628 41 TCCAGCCCAGGTTCACCAGTTCCCCTCTTCTTGTGAGACTG TCCAGCACAGGTTCACCAGTTCCCCTCTTCTTGTGAGACTG < 41bp 1 0.673194119445936 1 0.993877053260803 experiment 0.653611761108128 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42151608 chr17:42151594 synonymous SNV . 0 7 hPsi_associated_SNPs_728 0 0 1 0 2 Ribosome 1 0.43846890283219 0.012245893478394 1 hPsi_site_7374 iPseU_CNN:0.012245893478394;iRNA_PseU:1 7375 chr2 216190845 216190845 1 + G A COAD 216190840 + 216190820 216190860 41 AAGGACACCTCCTTGGAGACTAGACGCCAGTTAGCCTTGAA AAGGACACCTCCTTGGAGACTAGACACCAGTTAGCCTTGAA < 41bp 1 0.621996181462576 1 0.949608683586121 experiment 0.756007637074848 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216190840 chr2:216190845 nonsynonymous SNV 0.999 2 26 hPsi_associated_SNPs_729 0 0 1 0 1 chromatin 1 0.848528742929138 0.100782632827758 0.302942514141723 hPsi_site_7375 iPseU_CNN:0.100782632827758;iRNA_PseU:0.302942514141723 7376 chr1 10177613 10177613 1 + C T COAD 10177621 + 10177601 10177641 41 GAACTACCTCATCGAGTGTTTCGACCGAGTTGGAATAGAGG GAACTACCTCATTGAGTGTTTCGACCGAGTTGGAATAGAGG < 41bp 1 0.370306791678731 1 0.442985594272614 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UBE4B ENSG00000130939 CDS Human protein_coding chr1:10177621 chr1:10177613 synonymous SNV . 0 13 hPsi_associated_SNPs_731 0 0 1 0 2 Cytosol 1 0.440333954085139 1 1 hPsi_site_7376 iPseU_CNN:1;iRNA_PseU:1 7377 chr5 61822051 61822051 1 + A C COAD 61822034 + 61822014 61822054 41 GTTATTCAACTGAGTACAGATGTTTCACAGCCTCCACATGT GTTATTCAACTGAGTACAGATGTTTCACAGCCTCCACCTGT < 41bp 1 0.211885462495714 1 0.999585449695587 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock IPO11 ENSG00000086200 CDS Human protein_coding chr5:61822034 chr5:61822051 nonsynonymous SNV 1.000 4 38 hPsi_associated_SNPs_732 0 0 1 0 2 Ribosome 1 0.435836396898539 0.000829100608825906 1 hPsi_site_7377 iPseU_CNN:0.000829100608825906;iRNA_PseU:1 7378 chr2 217279653 217279653 1 + C A COAD 217279638 + 217279618 217279658 41 CAGTGAGCCATGGTGTCATTTTCAAGCAACAGAATCTCAGT CAGTGAGCCATGGTGTCATTTTCAAGCAACAGAATATCAGT < 41bp 1 0.500611542107821 1 0.97842401266098 experiment 0.998776915784358 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217279638 chr2:217279653 nonsynonymous SNV 0.909 0 36 hPsi_associated_SNPs_733 0 0 1 0 0 chromatin 1 0.417631209291472 0.04315197467804 1 hPsi_site_7378 iPseU_CNN:0.04315197467804;iRNA_PseU:1 7379 chr19 11548908 11548908 1 + G A COAD 11548911 + 11548891 11548931 41 GCTGCGATGGAACAGACGAGTACAACAGCGGCGTCATCTGT GCTGCGATGGAACAGACAAGTACAACAGCGGCGTCATCTGT < 41bp 1 0.568928860883813 1 0.999992609024048 experiment 0.862142278232373 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548911 chr19:11548908 nonsynonymous SNV 0.987 2 18 hPsi_associated_SNPs_734 0 0 1 0 2 Nucleus 1 0.439140378099347 1.47819519040748e-05 1 hPsi_site_7379 iPseU_CNN:1.47819519040748e-05;iRNA_PseU:1 7380 chr19 46198876 46198876 1 + C T COAD 46198863 + 46198843 46198883 41 GCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC GCCATTATGACTCGAAGCTCTTCCCACCCGGATTGACCCCC < 41bp 1 0.697441294077652 1 0.0232806503772736 experiment 0.605117411844696 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198863 chr19:46198876 nonsynonymous SNV 0.002 0 34 hPsi_associated_SNPs_735 0 0 1 0 0 chromatin 1 0.439096586293974 1 1 hPsi_site_7380 iPseU_CNN:1;iRNA_PseU:1 7381 chr8 42012237 42012237 1 + C T COAD 42012221 + 42012201 42012241 41 CCACCATGATCCATAGTCTTTTCTTGATCAACTCCTCTGGA CCACCATGATCCATAGTCTTTTCTTGATCAACTCCTTTGGA < 41bp 1 0.275834582009626 1 0.890213549137115 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42012221 chr8:42012237 nonsynonymous SNV 0.998 3 37 hPsi_associated_SNPs_736 0 0 1 0 0 Nucleus 1 0.438720311645211 0.21957290172577 1 hPsi_site_7381 iPseU_CNN:0.21957290172577;iRNA_PseU:1 7382 chr11 134239747 134239747 1 + T C COAD 134239753 + 134239733 134239773 41 CACGGCCAAGTACATGAAGCTTCGAGACTTCTTCGGCTCCA CACGGCCAAGTACACGAAGCTTCGAGACTTCTTCGGCTCCA < 41bp 1 0.340830037450434 1 1 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134239753 chr11:134239747 nonsynonymous SNV 0.920 1 15 hPsi_associated_SNPs_737 0 0 0 0 2 Ribosome 1 0.480360903228539 0 1 hPsi_site_7382 iPseU_CNN:0;iRNA_PseU:1 7383 chr16 30664262 30664262 1 + C T COAD 30664253 + 30664233 30664273 41 AGGCCTCCCGACCCTCTGTGTTTGTGTCGCGAGCCCTTGAG AGGCCTCCCGACCCTCTGTGTTTGTGTCGTGAGCCCTTGAG < 41bp 1 0.648636313107489 1 0.991558969020844 experiment 0.702727373785022 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664253 chr16:30664262 synonymous SNV . 0 30 hPsi_associated_SNPs_739 0 0 1 0 1 Cytosol 1 0.440528722258198 0.0168820619583121 1 hPsi_site_7383 iPseU_CNN:0.0168820619583121;iRNA_PseU:1 7384 chrX 47101020 47101020 1 + C T COAD 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGATGGGCTG < 41bp 1 0.48285717057876 1 0.943209707736969 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47101020 synonymous SNV . 0 35 hPsi_associated_SNPs_740 0 0 1 0 2 cytosol 1 0.87712889202847 0.113580584526062 0.245742215943059 hPsi_site_7384 iPseU_CNN:0.113580584526062;iRNA_PseU:0.245742215943059 7385 chr19 33696979 33696979 1 + G A COAD 33696967 + 33696947 33696987 41 AGGGTGGCAGTGGTCTGTGCTACACGCCTGCCGACCGCTGC AGGGTGGCAGTGGTCTGTGCTACACGCCTGCCAACCGCTGC < 41bp 1 0.414433545016995 1 0.977070271968842 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696967 chr19:33696979 nonsynonymous SNV 0.604 4 33 hPsi_associated_SNPs_741 0 0 1 0 0 Ribosome 1 0.870167458087972 0.045859456062316 0.259665083824056 hPsi_site_7385 iPseU_CNN:0.045859456062316;iRNA_PseU:0.259665083824056 7386 chr17 37815309 37815309 1 + G A COAD 37815318 + 37815298 37815338 41 CTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGG CTGCAGGGTCTAACAATGAATCAGATGAAGAAGTTGCTGGG < 41bp 1 0.218352842099085 1 0.999734401702881 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815318 chr17:37815309 nonsynonymous SNV 1.000 2 12 hPsi_associated_SNPs_742 0 0 1 0 1 Ribosome 1 0.470586078552095 0.000531196594238059 1 hPsi_site_7386 iPseU_CNN:0.000531196594238059;iRNA_PseU:1 7387 chr19 33696961 33696961 1 + C T COAD 33696967 + 33696947 33696987 41 AGGGTGGCAGTGGTCTGTGCTACACGCCTGCCGACCGCTGC AGGGTGGCAGTGGTTTGTGCTACACGCCTGCCGACCGCTGC < 41bp 1 0.45530217692967 1 0.998700618743896 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696967 chr19:33696961 synonymous SNV . 0 15 hPsi_associated_SNPs_744 0 0 0 0 0 Ribosome 1 0.552870017971173 0.00259876251220792 0.894259964057653 hPsi_site_7387 iPseU_CNN:0.00259876251220792;iRNA_PseU:0.894259964057653 7388 chr12 123467043 123467043 1 + A G COAD 123467054 + 123467034 123467074 41 CGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG CGAGGTCCTGGAGGAAATCGTAACCAAAGAACGACACAGAG < 41bp 1 0.136066093294849 1 0.999779462814331 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123467054 chr12:123467043 synonymous SNV . 0 10 hPsi_associated_SNPs_745 0 0 1 1 2 Cytosol 1 0.439170747787706 0.000441074371337891 1 hPsi_site_7388 iPseU_CNN:0.000441074371337891;iRNA_PseU:1 7389 chr14 92597338 92597338 1 + A G COAD 92597340 + 92597320 92597360 41 CCAAAAAAAATGACGTCTATTATCAAATTAACTACCCTTTC CCAAAAAAAATGACGTCTGTTATCAAATTAACTACCCTTTC < 41bp 1 0.677502872464234 1 0.923050284385681 experiment 0.644994255071532 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CPSF2 ENSG00000165934 CDS Human protein_coding chr14:92597340 chr14:92597338 nonsynonymous SNV 1.000 1 19 hPsi_associated_SNPs_746 0 0 1 0 1 Ribosome 1 0.947831723528237 0.153899431228638 0.104336552943527 hPsi_site_7389 iPseU_CNN:0.153899431228638;iRNA_PseU:0.104336552943527 7390 chr14 71435782 71435782 1 + C T COAD 71435794 + 71435774 71435814 41 GTTTAAGTCTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGGA GTTTAAGTTTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGGA < 41bp 1 0.570049618283677 1 0.999770402908325 experiment 0.859900763432646 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71435794 chr14:71435782 synonymous SNV . 0 9 hPsi_associated_SNPs_747 0 0 1 0 2 Endoplasmic reticulum 1 0.527289706693796 0.000459194183350053 0.945420586612409 hPsi_site_7390 iPseU_CNN:0.000459194183350053;iRNA_PseU:0.945420586612409 7391 chr7 92163971 92163971 1 + T C COAD 92163978 + 92163958 92163998 41 CATCATAAAACAATGGGGCATTATAACCACAATGACTCTTT CATCATAAAACAACGGGGCATTATAACCACAATGACTCTTT < 41bp 1 0.232845221951626 1 0.694966316223145 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RBM48 ENSG00000127993 CDS Human protein_coding chr7:92163978 chr7:92163971 nonsynonymous SNV 0.001 0 14 hPsi_associated_SNPs_748 0 0 1 0 0 Nucleus 1 0.993544093698372 0.61006736755371 0.0129118126032564 hPsi_site_7391 iPseU_CNN:0.61006736755371;iRNA_PseU:0.0129118126032564 7392 chr3 141622486 141622486 1 + T C COAD 141622489 + 141622469 141622509 41 CTTGCTCTTCTACCTAGTTTTTTATGGGTTCCTGGCTGCAC CTTGCTCTTCTACCTAGCTTTTTATGGGTTCCTGGCTGCAC < 41bp 1 0.510279490957651 1 0.970705389976501 experiment 0.979441018084698 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141622489 chr3:141622486 nonsynonymous SNV 1.000 2 18 hPsi_associated_SNPs_749 0 0 1 1 1 Ribosome 1 0.484770322159702 0.058589220046998 1 hPsi_site_7392 iPseU_CNN:0.058589220046998;iRNA_PseU:1 7393 chr6 348918 348918 1 + G A COAD 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCACTG < 41bp 1 0.678938996784282 1 0.999969005584717 experiment 0.642122006431436 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348918 synonymous SNV . 0 38 hPsi_associated_SNPs_750 0 0 0 0 0 Ribosome 1 0.608665252772692 6.19888305659622e-05 0.782669494454617 hPsi_site_7393 iPseU_CNN:6.19888305659622e-05;iRNA_PseU:0.782669494454617 7394 chr1 100756976 100756976 1 + G T COAD 100756966 + 100756946 100756986 41 CTTCTGATTTCAGGCTAAATTTATTGTGAAGAAATCAGAAG CTTCTGATTTCAGGCTAAATTTATTGTGAATAAATCAGAAG < 41bp 1 0.324811722667736 1 0.0284139811992645 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RTCA ENSG00000137996 CDS Human protein_coding chr1:100756966 chr1:100756976 nonsynonymous SNV 1.000 0 31 hPsi_associated_SNPs_751 0 0 1 0 1 Ribosome 1 0.438943397854834 1 1 hPsi_site_7394 iPseU_CNN:1;iRNA_PseU:1 7395 chr6 44394286 44394286 1 + A C COAD 44394271 + 44394251 44394291 41 AGAACCGCCTTTAACAGATTTACAGAAAAGTGAAGAACTAA AGAACCGCCTTTAACAGATTTACAGAAAAGTGAAGCACTAA < 41bp 1 0.679102589523981 1 0.993036150932312 experiment 0.641794820952038 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CDC5L ENSG00000096401 CDS Human protein_coding chr6:44394271 chr6:44394286 nonsynonymous SNV 1.000 3 36 hPsi_associated_SNPs_752 0 0 1 0 1 Nucleus 1 0.738678354026919 0.013927698135376 0.522643291946161 hPsi_site_7395 iPseU_CNN:0.013927698135376;iRNA_PseU:0.522643291946161 7396 chr1 233105749 233105749 1 + G A COAD 233105746 + 233105726 233105766 41 TCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCC TCAGCTTTTCATTCAAGCTGTTCATCAGACGCTGTCTACCC < 41bp 1 0.496676361562733 1 0.988079071044922 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NTPCR ENSG00000135778 CDS Human protein_coding chr1:233105746 chr1:233105749 nonsynonymous SNV 0.400 2 24 hPsi_associated_SNPs_753 0 0 1 0 1 Ribosome 1 0.975201792563841 0.023841857910156 0.0495964148723171 hPsi_site_7396 iPseU_CNN:0.023841857910156;iRNA_PseU:0.0495964148723171 7397 chr15 22990159 22990159 1 + G A COAD 22990155 + 22990135 22990175 41 CGGCTTCTCGGCTACCAGGGTATCGCCGTGGTCATGGAGGA CGGCTTCTCGGCTACCAGGGTATCACCGTGGTCATGGAGGA < 41bp 1 0.652807243625129 1 0.979377508163452 experiment 0.694385512749742 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22990155 chr15:22990159 nonsynonymous SNV . 0 25 hPsi_associated_SNPs_754 0 0 1 0 1 Cytosol 1 0.439080645359701 0.0412449836730959 1 hPsi_site_7397 iPseU_CNN:0.0412449836730959;iRNA_PseU:1 7398 chr5 162900436 162900436 1 + A G COAD 162900423 + 162900403 162900443 41 GGAAAAATACAAGCTAGATATTGCCCAGTTAGAAGAAAATT GGAAAAATACAAGCTAGATATTGCCCAGTTAGAGGAAAATT < 41bp 1 0.220113576712796 1 0.992445766925812 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HMMR ENSG00000072571 CDS Human protein_coding chr5:162900423 chr5:162900436 synonymous SNV . 0 34 hPsi_associated_SNPs_755 0 0 1 0 1 Cytosol 1 0.438718592994994 0.015108466148376 1 hPsi_site_7398 iPseU_CNN:0.015108466148376;iRNA_PseU:1 7399 chr6 5431294 5431294 1 + G C COAD 5431310 + 5431290 5431330 41 GGTAGACTGCTACTTCCCTTTTACACATCCTTCCTTTGAGA GGTACACTGCTACTTCCCTTTTACACATCCTTCCTTTGAGA < 41bp 1 0.473207576849871 1 0.999990880489349 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FARS2 ENSG00000145982 CDS Human protein_coding chr6:5431310 chr6:5431294 nonsynonymous SNV 0.984 4 5 hPsi_associated_SNPs_756 0 0 1 0 1 Ribosome 1 0.439011317520684 1.82390213019357e-05 1 hPsi_site_7399 iPseU_CNN:1.82390213019357e-05;iRNA_PseU:1 7400 chr15 31197420 31197420 1 + A G COAD 31197401 + 31197381 31197421 41 AGGATGAAGAATTTGCCGGTTCTAGTCCACAGAGTTCCAAA AGGATGAAGAATTTGCCGGTTCTAGTCCACAGAGTTCCAGA < 41bp 1 0.577648072510738 1 0.999831676483154 experiment 0.844703854978524 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31197401 chr15:31197420 nonsynonymous SNV 0.000 0 40 hPsi_associated_SNPs_758 0 0 1 0 0 Cytosol 1 0.440679910280173 0.000336647033692072 1 hPsi_site_7400 iPseU_CNN:0.000336647033692072;iRNA_PseU:1 7401 chr19 36220997 36220997 1 + C T COAD 36220991 + 36220971 36221011 41 TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT TCCAGGATGACAAGAAAGTCTTCTGCTAGAAACACACTGAT < 41bp 1 0.320711635414192 1 0.998520970344543 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36220991 chr19:36220997 stopgain 0.993 1 27 hPsi_associated_SNPs_759 0 0 1 0 1 chromatin 1 0.438718034997702 0.00295805931091397 1 hPsi_site_7401 iPseU_CNN:0.00295805931091397;iRNA_PseU:1 7402 chr7 16714136 16714136 1 + A G COAD 16714130 + 16714110 16714150 41 CCTTGAAGCTGTAGCCAAATTTCTGGACTCTACAGGCTCAA CCTTGAAGCTGTAGCCAAATTTCTGGGCTCTACAGGCTCAA < 41bp 1 0.551676843029332 1 0.866361975669861 experiment 0.896646313941335 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BZW2 ENSG00000136261 CDS Human protein_coding chr7:16714130 chr7:16714136 nonsynonymous SNV 0.959 4 27 hPsi_associated_SNPs_760 0 0 1 0 2 Ribosome 1 0.442647003285466 0.267276048660278 1 hPsi_site_7402 iPseU_CNN:0.267276048660278;iRNA_PseU:1 7403 chr10 82191808 82191808 1 + G T COAD 82191794 + 82191774 82191814 41 TGGAGACAAAGTAAACCTACTTTCTGTTCTGGAAGCTGCTA TGGAGACAAAGTAAACCTACTTTCTGTTCTGGAATCTGCTA < 41bp 1 0.365954551883161 1 0.99995219707489 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAM213A ENSG00000122378 CDS Human protein_coding chr10:82191794 chr10:82191808 nonsynonymous SNV 0.985 4 35 hPsi_associated_SNPs_761 0 0 1 0 1 Ribosome 1 0.440998194383359 9.56058502199486e-05 1 hPsi_site_7403 iPseU_CNN:9.56058502199486e-05;iRNA_PseU:1 7404 chr2 32689661 32689661 1 + G A COAD 32689666 + 32689646 32689686 41 CCTGTTCACAACTCTGTGCCTTCCAACCCAGTGGCTGCCCC CCTGTTCACAACTCTATGCCTTCCAACCCAGTGGCTGCCCC < 41bp 1 0.624606032070237 1 0.988978683948517 experiment 0.750787935859526 Functional Loss NA| BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32689666 chr2:32689661 nonsynonymous SNV 0.998 2 16 hPsi_associated_SNPs_762 0 0 1 0 1 Nucleus 1 0.511330960277911 0.0220426321029661 0.977338079444178 hPsi_site_7404 iPseU_CNN:0.0220426321029661;iRNA_PseU:0.977338079444178 7405 chrX 123211821 123211821 1 + T C COAD 123211815 + 123211795 123211835 41 ATTTCTTTATAGTATTATAATGACTATGGAGATATCATCAA ATTTCTTTATAGTATTATAATGACTACGGAGATATCATCAA < 41bp 1 0.209634149404603 1 0.994503200054169 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide STAG2 ENSG00000101972 CDS Human protein_coding chrX:123211815 chrX:123211821 synonymous SNV . 0 27 hPsi_associated_SNPs_765 0 0 1 0 2 Nucleus 1 0.903702792284387 0.0109935998916619 0.192594415431227 hPsi_site_7405 iPseU_CNN:0.0109935998916619;iRNA_PseU:0.192594415431227 7406 chr8 28575124 28575124 1 + G A COAD 28575142 + 28575122 28575162 41 TGGGAGACTTACTTCTCCACTGCTGACAGTATTTTTAATAC TGAGAGACTTACTTCTCCACTGCTGACAGTATTTTTAATAC < 41bp 1 0.273021275700938 1 0.964285850524902 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575142 chr8:28575124 stopgain 1.000 1 3 hPsi_associated_SNPs_766 0 0 1 0 0 Endoplasmic reticulum 1 0.438710450941184 0.071428298950196 1 hPsi_site_7406 iPseU_CNN:0.071428298950196;iRNA_PseU:1 7407 chr7 5256731 5256731 1 + G A COAD 5256735 + 5256715 5256755 41 TTGCAGGCCTGTGTGCGCTGTCAATCAACAACGACAACTGC TTGCAGGCCTGTGTGCACTGTCAATCAACAACGACAACTGC < 41bp 1 0.477498000727837 1 0.99238121509552 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5256735 chr7:5256731 synonymous SNV . 0 17 hPsi_associated_SNPs_767 0 0 1 0 2 Cytosol 1 0.791035759229845 0.01523756980896 0.417928481540309 hPsi_site_7407 iPseU_CNN:0.01523756980896;iRNA_PseU:0.417928481540309 7408 chr7 5256730 5256730 1 + C T COAD 5256735 + 5256715 5256755 41 TTGCAGGCCTGTGTGCGCTGTCAATCAACAACGACAACTGC TTGCAGGCCTGTGTGTGCTGTCAATCAACAACGACAACTGC < 41bp 1 0.429526704979371 1 0.814621210098267 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5256735 chr7:5256730 nonsynonymous SNV 0.997 2 16 hPsi_associated_SNPs_768 0 0 1 0 2 Cytosol 1 0.611044465536731 0.370757579803466 0.777911068926538 hPsi_site_7408 iPseU_CNN:0.370757579803466;iRNA_PseU:0.777911068926538 7409 chrX 133632688 133632688 1 + T A COAD 133632671 + 133632651 133632691 41 AATTCCAGACAAGTTTGTTGTAGGATATGCCCTTGACTATA AATTCCAGACAAGTTTGTTGTAGGATATGCCCTTGACAATA < 41bp 1 0.654495418966714 1 0.994931697845459 experiment 0.691009162066573 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133632671 chrX:133632688 nonsynonymous SNV 1.000 5 38 hPsi_associated_SNPs_769 0 0 1 2 2 Cytosol 1 0.999991529363909 0.010136604309082 1.69412721813256e-05 hPsi_site_7409 iPseU_CNN:0.010136604309082;iRNA_PseU:1.69412721813256e-05 7410 chr18 73000344 73000344 1 + C T COAD 73000352 + 73000332 73000372 41 GACACACTTGGGCTTCAGCCTGAAGGATCTCTCCAAGCTGC GACACACTTGGGTTTCAGCCTGAAGGATCTCTCCAAGCTGC < 41bp 1 0.5324938001104 1 0.9765505194664 experiment 0.9350123997792 Functional Loss NA| TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:73000352 chr18:73000344 synonymous SNV . 0 13 hPsi_associated_SNPs_770 0 0 1 0 0 Cytosol 1 0.471145960376569 0.0468989610671999 1 hPsi_site_7410 iPseU_CNN:0.0468989610671999;iRNA_PseU:1 7411 chr2 223799278 223799278 1 + G A COAD 223799284 + 223799264 223799304 41 ATTGGATTTGTTGTGCCAAATCAAAAGGAACTAACTGAACT ATTGGATTTGTTGTACCAAATCAAAAGGAACTAACTGAACT < 41bp 1 0.0256707374787484 1 0.993952572345734 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ACSL3 ENSG00000123983 CDS Human protein_coding chr2:223799284 chr2:223799278 synonymous SNV . 0 15 hPsi_associated_SNPs_771 0 0 1 0 1 Endoplasmic reticulum 1 0.612020493888273 0.012094855308532 0.775959012223454 hPsi_site_7411 iPseU_CNN:0.012094855308532;iRNA_PseU:0.775959012223454 7412 chrX 117874986 117874986 1 + A T COAD 117875003 + 117874983 117875023 41 CTCAGCCACCTGTGACAAATTTGAGTGTCTCTGTTGAAAAC CTCTGCCACCTGTGACAAATTTGAGTGTCTCTGTTGAAAAC < 41bp 1 0.605433744858829 1 0.97322952747345 experiment 0.789132510282341 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117875003 chrX:117874986 nonsynonymous SNV 0.961 2 4 hPsi_associated_SNPs_772 0 0 1 0 1 Endoplasmic reticulum 1 0.987834664532865 0.0535409450530999 0.0243306709342708 hPsi_site_7412 iPseU_CNN:0.0535409450530999;iRNA_PseU:0.0243306709342708 Hair shape 7413 chr12 70723241 70723241 1 + A G COAD 70723240 + 70723220 70723260 41 ATGAGGGGGATGAGCAACAATACCCCTCAGTTAAATCGCAG ATGAGGGGGATGAGCAACAATGCCCCTCAGTTAAATCGCAG < 41bp 1 0.069518706958367 1 0.0101556479930878 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70723240 chr12:70723241 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_773 0 0 1 0 1 Nucleus 1 0.515848213513088 1 0.968303572973824 hPsi_site_7413 iPseU_CNN:1;iRNA_PseU:0.968303572973824 7414 chr19 1434882 1434882 1 + G A COAD 1434892 + 1434872 1434912 41 GAACCACAACGTGCAAGGGTTCCACCCCTACCGACGCTAGC GAACCACAACATGCAAGGGTTCCACCCCTACCGACGCTAGC < 41bp 1 0.647212915717781 1 0.999247312545776 experiment 0.705574168564438 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434892 chr19:1434882 nonsynonymous SNV 0.999 4 11 hPsi_associated_SNPs_774 0 0 1 0 0 chromatin 1 0.948904179994724 0.00150537490844793 0.102191640010553 hPsi_site_7414 iPseU_CNN:0.00150537490844793;iRNA_PseU:0.102191640010553 7415 chr21 34929528 34929528 1 + C T COAD 34929531 + 34929511 34929551 41 TGCTAAGGCTGGTGTCCCTTTACCACCAAACCTAAAGCCTG TGCTAAGGCTGGTGTCCTTTTACCACCAAACCTAAAGCCTG < 41bp 1 0.572077342287714 1 0.999257326126099 experiment 0.855845315424572 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SON ENSG00000159140 CDS Human protein_coding chr21:34929531 chr21:34929528 nonsynonymous SNV 1.000 4 18 hPsi_associated_SNPs_775 0 0 1 0 2 Nucleus 1 0.438718592897332 0.00148534774780207 1 hPsi_site_7415 iPseU_CNN:0.00148534774780207;iRNA_PseU:1 7416 chr19 39976423 39976423 1 + C T COAD 39976431 + 39976411 39976451 41 GGAGCTCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGT GGAGCTCACCGGTGTCCTCTTGCATCCTGAGTGGTCGGTGT < 41bp 1 0.315941200781277 1 0.860920190811157 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39976431 chr19:39976423 nonsynonymous SNV . 0 13 hPsi_associated_SNPs_776 0 0 1 0 2 Ribosome 1 0.438821053990697 0.278159618377686 1 hPsi_site_7416 iPseU_CNN:0.278159618377686;iRNA_PseU:1 7417 chr22 21224765 21224765 1 + A G COAD 21224755 + 21224735 21224775 41 TGGGGGGCTGGTCAATTACTTCAAATCCAAACCAGTAGAGA TGGGGGGCTGGTCAATTACTTCAAATCCAAGCCAGTAGAGA < 41bp 1 0.541153960005769 1 0.998567700386047 experiment 0.917692079988462 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SNAP29 ENSG00000099940 CDS Human protein_coding chr22:21224755 chr22:21224765 synonymous SNV . 0 31 hPsi_associated_SNPs_777 0 0 1 0 1 Ribosome 1 0.701919585007617 0.00286459922790594 0.596160829984765 hPsi_site_7417 iPseU_CNN:0.00286459922790594;iRNA_PseU:0.596160829984765 7418 chrX 118540508 118540508 1 + A G COAD 118540525 + 118540505 118540545 41 TCCACCATTGTAACATATCCTACAGACCTCATCAAAACCCG TCCGCCATTGTAACATATCCTACAGACCTCATCAAAACCCG < 41bp 1 0.669249920041463 1 0.999090075492859 experiment 0.661500159917075 Functional Loss NA| SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118540525 chrX:118540508 nonsynonymous SNV 0.991 1 4 hPsi_associated_SNPs_778 0 0 0 0 1 Cytosol 1 0.448443815264796 0.001819849014282 1 hPsi_site_7418 iPseU_CNN:0.001819849014282;iRNA_PseU:1 7419 chr19 45494612 45494612 1 + C T COAD 45494610 + 45494590 45494630 41 CCTGGGTGCTCAGCATGCTCTACGGCTTCCTGCTGACCTTC CCTGGGTGCTCAGCATGCTCTATGGCTTCCTGCTGACCTTC < 41bp 1 0.405749878593892 1 0.998435437679291 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45494610 chr19:45494612 synonymous SNV . 0 23 hPsi_associated_SNPs_780 0 0 1 0 1 Cytosol 1 0.792119303566964 0.00312912464141801 0.415761392866072 hPsi_site_7419 iPseU_CNN:0.00312912464141801;iRNA_PseU:0.415761392866072 7420 chr2 233321711 233321711 1 + G A COAD 233321719 + 233321699 233321739 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCAGCCACCCGCTTTAACCAGTGCAACACGACACG < 41bp 1 0.469398017362725 1 0.98842442035675 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPI ENSG00000163295 CDS Human protein_coding chr2:233321719 chr2:233321711 nonsynonymous SNV 0.008 3 13 hPsi_associated_SNPs_781 0 0 0 0 1 Cytosol 1 0.474047382023411 0.0231511592864999 1 hPsi_site_7420 iPseU_CNN:0.0231511592864999;iRNA_PseU:1 7421 chr17 65850209 65850209 1 + T C COAD 65850226 + 65850206 65850246 41 ACTTTGGCACTGTTTTGAGATTATCTCCTTTTCGCTTTGAG ACTCTGGCACTGTTTTGAGATTATCTCCTTTTCGCTTTGAG < 41bp 1 0.524721657957823 1 0.999534249305725 experiment 0.950556684084353 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BPTF ENSG00000171634 CDS Human protein_coding chr17:65850226 chr17:65850209 nonsynonymous SNV 1.000 4 4 hPsi_associated_SNPs_782 0 0 1 0 0 Cytosol 1 0.438964219702886 0.000931501388550027 1 hPsi_site_7421 iPseU_CNN:0.000931501388550027;iRNA_PseU:1 7422 chr5 74009432 74009432 1 + C A COAD 74009441 + 74009421 74009461 41 GAATTTGATACCCCTGGGCATACACTATCTTGGGGAAAAGG GAATTTGATACACCTGGGCATACACTATCTTGGGGAAAAGG < 41bp 1 0.302855305290648 1 0.968942105770111 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:74009441 chr5:74009432 synonymous SNV . 0 12 hPsi_associated_SNPs_783 0 0 1 0 1 Cytosol 1 0.438718591672593 0.0621157884597781 1 hPsi_site_7422 iPseU_CNN:0.0621157884597781;iRNA_PseU:1 7423 chr3 31663652 31663652 1 + T A COAD 31663646 + 31663626 31663666 41 AGTGATGGTGCGACTGATGTTGACTTTGACTCCAGTCGTGT AGTGATGGTGCGACTGATGTTGACTTAGACTCCAGTCGTGT < 41bp 1 0.16620741105089 1 0.993876457214355 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31663646 chr3:31663652 stopgain 0.999 1 27 hPsi_associated_SNPs_784 0 0 1 0 1 Nucleus 1 0.999993179177716 0.01224708557129 1.36416445677412e-05 hPsi_site_7423 iPseU_CNN:0.01224708557129;iRNA_PseU:1.36416445677412e-05 7424 chr12 98992444 98992444 1 + G A COAD 98992435 + 98992415 98992455 41 AGCCAGGTTATGCCAACACTTTGAGGGATGCAGCTCCCAAA AGCCAGGTTATGCCAACACTTTGAGGGATACAGCTCCCAAA < 41bp 1 0.267447587445657 1 0.999441742897034 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992435 chr12:98992444 nonsynonymous SNV 0.981 2 30 hPsi_associated_SNPs_785 0 0 1 0 0 Ribosome 1 0.506154017855081 0.00111651420593195 0.987691964289838 hPsi_site_7424 iPseU_CNN:0.00111651420593195;iRNA_PseU:0.987691964289838 7425 chr1 156314405 156314405 1 + C T COAD 156314408 + 156314388 156314428 41 GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCTCCCCCAG GCTAATGCTGTGCCTCTTTGTAGAGCAAAACCCTCCCCCAG < 41bp 1 0.363805457562808 1 0.998246908187866 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSACC ENSG00000163467 CDS Human protein_coding chr1:156314408 chr1:156314405 synonymous SNV . 0 18 hPsi_associated_SNPs_786 0 0 0 0 2 chromatin 1 0.438718578538717 0.00350618362426802 1 hPsi_site_7425 iPseU_CNN:0.00350618362426802;iRNA_PseU:1 7426 chr3 127783746 127783746 1 + G A COAD 127783739 + 127783719 127783759 41 GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCT GGAATGGAATTTGAAGGTGCTATCATCACACTTTTCCATCT < 41bp 1 0.698386503612727 1 0.987058758735657 experiment 0.603226992774545 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127783739 chr3:127783746 nonsynonymous SNV 0.019 4 28 hPsi_associated_SNPs_787 0 0 1 0 2 Ribosome 1 0.534361926953609 0.0258824825286861 0.931276146092783 hPsi_site_7426 iPseU_CNN:0.0258824825286861;iRNA_PseU:0.931276146092783 7427 chr17 66247257 66247257 1 + T C COAD 66247266 + 66247246 66247286 41 GGGAATAACAATGATTGATCTTTACCCAAGAGACTCGTGGA GGGAATAACAACGATTGATCTTTACCCAAGAGACTCGTGGA < 41bp 1 0.389331428356664 1 0.999997794628143 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66247266 chr17:66247257 nonsynonymous SNV 0.998 1 12 hPsi_associated_SNPs_788 0 0 1 0 2 Ribosome 1 0.925307936464227 4.41074371404504e-06 0.149384127071546 hPsi_site_7427 iPseU_CNN:4.41074371404504e-06;iRNA_PseU:0.149384127071546 7428 chr7 819716 819716 1 + A G COAD 819697 + 819677 819717 41 GTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTAC GTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTGC < 41bp 1 0.395682988449288 1 0.999761819839478 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819697 chr7:819716 nonsynonymous SNV 0.359 1 40 hPsi_associated_SNPs_789 0 0 1 0 1 Ribosome 1 0.986654968735931 0.000476360321044034 0.026690062528139 hPsi_site_7428 iPseU_CNN:0.000476360321044034;iRNA_PseU:0.026690062528139 7429 chr2 132274462 132274462 1 + G A COAD 132274469 + 132274449 132274489 41 GCTACCTGCAGCCGTGGCGGTACGCGCCTGACAAGCAGGCT GCTACCTGCAGCCATGGCGGTACGCGCCTGACAAGCAGGCT < 41bp 1 0.68060670749063 1 0.999980568885803 experiment 0.63878658501874 Functional Loss NA| LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132274469 chr2:132274462 . . 0 14 hPsi_associated_SNPs_790 0 0 0 0 2 unknown 1 0.440751441456228 3.88622283939988e-05 1 hPsi_site_7429 iPseU_CNN:3.88622283939988e-05;iRNA_PseU:1 7430 chr10 7844736 7844736 1 + A G COAD 7844750 + 7844730 7844770 41 TTGACAAATTGACATTGACATTCAACCGTACCCGCCAAGCT TTGACAGATTGACATTGACATTCAACCGTACCCGCCAAGCT < 41bp 1 0.603878518676916 1 0.999840497970581 experiment 0.792242962646168 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844750 chr10:7844736 nonsynonymous SNV 0.999 1 7 hPsi_associated_SNPs_791 0 0 1 0 2 Ribosome 1 0.438738667621647 0.000319004058837891 1 hPsi_site_7430 iPseU_CNN:0.000319004058837891;iRNA_PseU:1 7431 chr7 2409140 2409140 1 + C T COAD 2409131 + 2409111 2409151 41 TTTTCTTGGTCTCCTGGTGGTAACATAATCGCCTTCTGGGT TTTTCTTGGTCTCCTGGTGGTAACATAATTGCCTTCTGGGT < 41bp 1 0.401340516829335 1 0.953195929527283 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2409131 chr7:2409140 synonymous SNV . 0 30 hPsi_associated_SNPs_792 0 0 1 0 1 Ribosome 1 0.438834493025268 0.0936081409454339 1 hPsi_site_7431 iPseU_CNN:0.0936081409454339;iRNA_PseU:1 7432 chr11 43419010 43419010 1 + C G COAD 43419024 + 43419004 43419044 41 TCTTCACCAGCTATTACACTTTGGGGAATATATATGCAGTA TCTTCAGCAGCTATTACACTTTGGGGAATATATATGCAGTA < 41bp 1 0.294505046030551 1 0.981862783432007 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TTC17 ENSG00000052841 CDS Human protein_coding chr11:43419024 chr11:43419010 nonsynonymous SNV 1.000 3 7 hPsi_associated_SNPs_793 0 0 1 0 1 Nucleus 1 0.438695548168562 0.0362744331359861 1 hPsi_site_7432 iPseU_CNN:0.0362744331359861;iRNA_PseU:1 7433 chr22 42290878 42290878 1 + C A COAD 42290879 + 42290859 42290899 41 AAGAACCTGCTGGAGCGAGCTATAGAGTCCTTGGTGAAACC AAGAACCTGCTGGAGCGAGATATAGAGTCCTTGGTGAAACC < 41bp 1 0.641990319118185 1 0.999263763427734 experiment 0.71601936176363 Functional Loss NA| SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42290879 chr22:42290878 nonsynonymous SNV 0.895 4 20 hPsi_associated_SNPs_795 0 0 1 0 2 Ribosome 1 0.438706509898444 0.00147247314453192 1 hPsi_site_7433 iPseU_CNN:0.00147247314453192;iRNA_PseU:1 7434 chr3 47890759 47890759 1 + G A COAD 47890774 + 47890754 47890794 41 CCTCCGCCCAGTGCAACGAGTACAGTGAGGAGGAGGAGCTG CCTCCACCCAGTGCAACGAGTACAGTGAGGAGGAGGAGCTG < 41bp 1 0.315099490661645 1 0.995254993438721 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47890774 chr3:47890759 nonsynonymous SNV 0.991 1 6 hPsi_associated_SNPs_796 0 0 1 0 2 Cytosol 1 0.464114739214979 0.00949001312255793 1 hPsi_site_7434 iPseU_CNN:0.00949001312255793;iRNA_PseU:1 7435 chr2 32667451 32667451 1 + T C COAD 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACATCGCACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA < 41bp 1 0.417315692567497 1 0.982020795345306 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667451 nonsynonymous SNV 0.973 1 7 hPsi_associated_SNPs_797 0 0 1 0 2 Nucleus 1 0.46145844840062 0.0359584093093881 1 hPsi_site_7435 iPseU_CNN:0.0359584093093881;iRNA_PseU:1 7436 chr2 171807870 171807870 1 + T C COAD 171807858 + 171807838 171807878 41 TCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAA TCTGAAGATCTATTCAGCCTTATCGAAACACACGAAGCAAA < 41bp 1 0.518521353224563 1 0.992114186286926 experiment 0.962957293550874 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171807858 chr2:171807870 synonymous SNV . 0 33 hPsi_associated_SNPs_798 0 0 1 0 2 Ribosome 1 0.982491695991473 0.0157716274261479 0.0350166080170542 hPsi_site_7436 iPseU_CNN:0.0157716274261479;iRNA_PseU:0.0350166080170542 7437 chr3 183474398 183474398 1 + C T COAD 183474406 + 183474386 183474426 41 GCAAGGCACTGCCGGCTCTGTTATTAATAATCCTTATGTTA GCAAGGCACTGCTGGCTCTGTTATTAATAATCCTTATGTTA < 41bp 1 0.320305014905004 1 0.000346273183822632 experiment 1 Functional Loss NA| YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183474406 chr3:183474398 synonymous SNV . 0 13 hPsi_associated_SNPs_800 0 0 1 0 2 Nucleus 1 0.439343454437754 1 1 hPsi_site_7437 iPseU_CNN:1;iRNA_PseU:1 7438 chr13 46056551 46056551 1 + C T COAD 46056557 + 46056537 46056577 41 TCGGTGAATAGTGACGGATTTATACCTATGCTGGCCAAGTT TCGGTGAATAGTGATGGATTTATACCTATGCTGGCCAAGTT < 41bp 1 0.563954467754698 1 0.999776244163513 experiment 0.872091064490603 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COG3 ENSG00000136152 CDS Human protein_coding chr13:46056557 chr13:46056551 synonymous SNV . 0 15 hPsi_associated_SNPs_801 0 0 0 1 2 Nucleus 1 0.44298138451441 0.000447511672974077 1 hPsi_site_7438 iPseU_CNN:0.000447511672974077;iRNA_PseU:1 7439 chr10 126655264 126655264 1 + C G COAD 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGCTTGCTGAATCGTGCTTCTGCCTTTGATGTTGGCTA < 41bp 1 0.417708800180165 1 0.982175052165985 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655264 nonsynonymous SNV 0.998 1 19 hPsi_associated_SNPs_802 0 0 1 0 1 Ribosome 1 0.442479734138758 0.03564989566803 1 hPsi_site_7439 iPseU_CNN:0.03564989566803;iRNA_PseU:1 7440 chr22 29695767 29695767 1 + G T COAD 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGTGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG < 41bp 1 0.185110788145392 1 0.999515891075134 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695767 synonymous SNV . 0 6 hPsi_associated_SNPs_804 0 0 1 0 1 Cytosol 1 0.438725041793421 0.000968217849731889 1 hPsi_site_7440 iPseU_CNN:0.000968217849731889;iRNA_PseU:1 7441 chr2 152321410 152321410 1 + T C COAD 152321393 + 152321373 152321413 41 ATCCATATTCTGAAGGACAATTTTTAGATGAACATCATAGT ATCCATATTCTGAAGGACAATTTTTAGATGAACATCACAGT < 41bp 1 0.11309725195469 1 0.997898697853088 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RIF1 ENSG00000080345 CDS Human protein_coding chr2:152321393 chr2:152321410 synonymous SNV . 0 38 hPsi_associated_SNPs_805 0 0 1 0 0 Nucleus 1 0.550463157697508 0.00420260429382391 0.899073684604984 hPsi_site_7441 iPseU_CNN:0.00420260429382391;iRNA_PseU:0.899073684604984 7442 chr10 7844756 7844756 1 + C T COAD 7844750 + 7844730 7844770 41 TTGACAAATTGACATTGACATTCAACCGTACCCGCCAAGCT TTGACAAATTGACATTGACATTCAACTGTACCCGCCAAGCT < 41bp 1 0.569660132673623 1 0.998548746109009 experiment 0.860679734652754 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844750 chr10:7844756 nonsynonymous SNV 0.998 2 27 hPsi_associated_SNPs_806 0 0 1 0 2 Ribosome 1 0.439021011149063 0.00290250778198198 1 hPsi_site_7442 iPseU_CNN:0.00290250778198198;iRNA_PseU:1 7443 chr7 92905527 92905527 1 + C A COAD 92905541 + 92905521 92905561 41 CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT CAACACAGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT < 41bp 1 0.650436178800923 1 0.9996018409729 experiment 0.699127642398153 Functional Loss NA| VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905541 chr7:92905527 synonymous SNV . 0 7 hPsi_associated_SNPs_808 0 0 1 0 2 Cytosol 1 0.438760440199143 0.000796318054200107 1 hPsi_site_7443 iPseU_CNN:0.000796318054200107;iRNA_PseU:1 7444 chrX 48339881 48339881 1 + G A COAD 48339862 + 48339842 48339882 41 TCTACAGCCAGCTGCAGGTCTTCTTCTCCAGCGTGCTGTGT TCTACAGCCAGCTGCAGGTCTTCTTCTCCAGCGTGCTGTAT < 41bp 1 0.631418258591319 1 0.981301546096802 experiment 0.737163482817362 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48339862 chrX:48339881 nonsynonymous SNV 0.993 3 40 hPsi_associated_SNPs_809 0 0 1 0 2 Ribosome 1 0.967313286231381 0.037396907806396 0.065373427537238 hPsi_site_7444 iPseU_CNN:0.037396907806396;iRNA_PseU:0.065373427537238 7445 chr4 17609126 17609126 1 + G A COAD 17609132 + 17609112 17609152 41 CCAACAAAGATGAAGTTCCCTATCTACGGAAAGGCATGACT CCAACAAAGATGAAATTCCCTATCTACGGAAAGGCATGACT < 41bp 1 0.69034433862579 1 0.930399298667908 experiment 0.619311322748419 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LAP3 ENSG00000002549 CDS Human protein_coding chr4:17609132 chr4:17609126 nonsynonymous SNV 0.934 0 15 hPsi_associated_SNPs_810 0 0 0 0 0 Ribosome 1 0.976718812567091 0.139201402664184 0.0465623748658186 hPsi_site_7445 iPseU_CNN:0.139201402664184;iRNA_PseU:0.0465623748658186 7446 chr16 89778507 89778507 1 + G A COAD 89778495 + 89778475 89778515 41 CCGCAGCCGGCGCTCCTCCATCTTTCTCTGGAGCTGGGTGC CCGCAGCCGGCGCTCCTCCATCTTTCTCTGGAACTGGGTGC < 41bp 1 0.26586409682921 1 0.917520046234131 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VPS9D1 ENSG00000075399 CDS Human protein_coding chr16:89778495 chr16:89778507 nonsynonymous SNV 0.900 4 33 hPsi_associated_SNPs_811 0 0 1 0 0 Cytosol 1 0.477561288249266 0.164959907531738 1 hPsi_site_7446 iPseU_CNN:0.164959907531738;iRNA_PseU:1 7447 chr21 45457723 45457723 1 + A G COAD 45457721 + 45457701 45457741 41 CACCTAGAGTCTAACTTTGTTCAATTCAAAGAGGAGCTGCT CACCTAGAGTCTAACTTTGTTCGATTCAAAGAGGAGCTGCT < 41bp 1 0.499041707982566 1 0.999994874000549 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45457721 chr21:45457723 nonsynonymous SNV 0.989 1 23 hPsi_associated_SNPs_812 0 0 1 0 2 Cytosol 1 0.439147413161031 1.02519989020333e-05 1 hPsi_site_7447 iPseU_CNN:1.02519989020333e-05;iRNA_PseU:1 7448 chr10 104122284 104122284 1 + A G COAD 104122275 + 104122255 104122295 41 ACTCTATACAACACACCTACTATCTCTTGATGCCCTATTGA ACTCTATACAACACACCTACTATCTCTTGGTGCCCTATTGA < 41bp 1 0.42933992264435 1 0.995901703834534 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104122275 chr10:104122284 nonsynonymous SNV 1.000 3 30 hPsi_associated_SNPs_813 0 0 1 0 1 Nucleus 1 0.994797468264309 0.00819659233093195 0.0104050634713817 hPsi_site_7448 iPseU_CNN:0.00819659233093195;iRNA_PseU:0.0104050634713817 7449 chr17 34848719 34848719 1 + A G COAD 34848708 + 34848688 34848728 41 GAAAAAAATAAGATCAGCTCTTCCTACCAAAACCGTAAAGC GAAAAAAATAAGATCAGCTCTTCCTACCAAAGCCGTAAAGC < 41bp 1 0.696687216691279 1 0.343897998332977 experiment 0.606625566617443 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNHIT3 ENSG00000108278 CDS Human other chr17:34848708 chr17:34848719 nonsynonymous SNV 0.031 0 32 hPsi_associated_SNPs_814 0 0 1 0 2 Cytosol 1 0.894593531595694 1 0.210812936808612 hPsi_site_7449 iPseU_CNN:1;iRNA_PseU:0.210812936808612 7450 chr5 141313860 141313860 1 + G A COAD 141313856 + 141313836 141313876 41 AGGGCCACAGCCTGGCTCAGTACCGCTATGCCAGGTGCCTA AGGGCCACAGCCTGGCTCAGTACCACTATGCCAGGTGCCTA < 41bp 1 0.213491659820326 1 0.990501761436462 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141313856 chr5:141313860 nonsynonymous SNV 1.000 1 25 hPsi_associated_SNPs_815 0 0 1 0 1 Ribosome 1 0.439096148449527 0.0189964771270761 1 hPsi_site_7450 iPseU_CNN:0.0189964771270761;iRNA_PseU:1 7451 chr2 109086529 109086529 1 + C G COAD 109086516 + 109086496 109086536 41 GCAGGAAGAGCTTTTACAGTTGAAAGCTATACACCAAGAAG GCAGGAAGAGCTTTTACAGTTGAAAGCTATACAGCAAGAAG < 41bp 1 0.132079739245253 1 0.99011766910553 experiment 1 Functional Loss NA| GCC2 ENSG00000135968 CDS Human protein_coding chr2:109086516 chr2:109086529 nonsynonymous SNV 0.087 3 34 hPsi_associated_SNPs_816 0 0 1 0 0 chromatin 1 0.438711873289772 0.01976466178894 1 hPsi_site_7451 iPseU_CNN:0.01976466178894;iRNA_PseU:1 7452 chr3 93813931 93813931 1 + T C COAD 93813948 + 93813928 93813968 41 GACTCTCAGAAGGCATCCTGTAGGATAAGTCAAAGGAGGAA GACCCTCAGAAGGCATCCTGTAGGATAAGTCAAAGGAGGAA < 41bp 1 0.153825912742118 1 0.962384819984436 experiment 1 Functional Loss NA| NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93813948 chr3:93813931 nonsynonymous SNV 0.895 0 4 hPsi_associated_SNPs_817 0 0 1 0 2 chromatin 1 0.438718593005363 0.0752303600311279 1 hPsi_site_7452 iPseU_CNN:0.0752303600311279;iRNA_PseU:1 7453 chr12 104732921 104732921 1 + G A COAD 104732933 + 104732913 104732953 41 TTAGGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG TTAGGAACATGTTGTGGGCTTTCACGTACTGGGTCCAAATG < 41bp 1 0.530706846071656 1 0.999763488769531 experiment 0.938586307856688 Functional Loss NA| TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732933 chr12:104732921 nonsynonymous SNV 1.000 5 9 hPsi_associated_SNPs_818 0 0 1 0 1 Ribosome 1 0.999383216029029 0.000473022460937944 0.0012335679419424 hPsi_site_7453 iPseU_CNN:0.000473022460937944;iRNA_PseU:0.0012335679419424 7454 chr17 73820417 73820417 1 + C T COAD 73820434 + 73820414 73820454 41 ACACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT ACATGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT < 41bp 1 0.423047508042162 1 0.998352766036987 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNK ENSG00000132478 CDS Human protein_coding chr17:73820434 chr17:73820417 synonymous SNV . 0 4 hPsi_associated_SNPs_819 0 0 1 0 1 Cytosol 1 0.999191147507158 0.00329446792602606 0.00161770498568359 hPsi_site_7454 iPseU_CNN:0.00329446792602606;iRNA_PseU:0.00161770498568359 7455 chr9 36083412 36083412 1 + T C COAD 36083425 + 36083405 36083445 41 CCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTC CCGAGAACACTGTCAAGCCATTTTTCGAACAGACTCTTCTC < 41bp 1 0.209868849668309 1 0.976436734199524 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RECK ENSG00000122707 CDS Human protein_coding chr9:36083425 chr9:36083412 nonsynonymous SNV 1.000 2 8 hPsi_associated_SNPs_821 0 0 1 3 1 exosome 1 0.916591554924284 0.0471265316009519 0.166816890151432 hPsi_site_7455 iPseU_CNN:0.0471265316009519;iRNA_PseU:0.166816890151432 7456 chrX 134556201 134556201 1 + G A COAD 134556195 + 134556175 134556215 41 TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGCGG TCACGCGCACGCTGCTCACCTTCTTCAACCTGGCCTGGCGG < 41bp 1 0.33967919658049 1 0.999913692474365 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMIM10L2A ENSG00000178947 ncRNA_exonic Human protein_coding chrX:134556195 chrX:134556201 . . 0 27 hPsi_associated_SNPs_822 0 0 0 0 0 exosome 1 0.439753962908853 0.000172615051269975 1 hPsi_site_7456 iPseU_CNN:0.000172615051269975;iRNA_PseU:1 7457 chr11 20388776 20388776 1 + T C COAD 20388756 + 20388736 20388776 41 ACTTTGAAAAGTTGGATGACTACGCCTCTGCCTTTCAAGGT ACTTTGAAAAGTTGGATGACTACGCCTCTGCCTTTCAAGGC < 41bp 1 0.374431360398798 1 0.840136885643005 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20388756 chr11:20388776 synonymous SNV . 0 41 hPsi_associated_SNPs_823 0 0 1 0 2 Endoplasmic reticulum 1 0.97309304396433 0.31972622871399 0.0538139120713392 hPsi_site_7457 iPseU_CNN:0.31972622871399;iRNA_PseU:0.0538139120713392 7458 chr9 132980195 132980195 1 + C T COAD 132980184 + 132980164 132980204 41 TCCAGAAGATCTACAAGCAATTCTTCCCGTTCGGAGACCCC TCCAGAAGATCTACAAGCAATTCTTCCCGTTTGGAGACCCC < 41bp 1 0.475968940089362 1 0.997949242591858 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NCS1 ENSG00000107130 CDS Human protein_coding chr9:132980184 chr9:132980195 synonymous SNV . 0 32 hPsi_associated_SNPs_824 0 0 1 0 2 Cytosol 1 0.439169882752547 0.00410151481628396 1 hPsi_site_7458 iPseU_CNN:0.00410151481628396;iRNA_PseU:1 7459 chr15 41192393 41192393 1 + G T COAD 41192374 + 41192354 41192394 41 TGCCCTGACCCAGAGCTACTTTGAGGAGATTGCCCTCAAGT TGCCCTGACCCAGAGCTACTTTGAGGAGATTGCCCTCAATT < 41bp 1 0.368537886117435 1 0.785548329353333 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192374 chr15:41192393 nonsynonymous SNV 1.000 2 40 hPsi_associated_SNPs_825 0 0 0 0 0 chromatin 1 0.438882955290717 0.428903341293334 1 hPsi_site_7459 iPseU_CNN:0.428903341293334;iRNA_PseU:1 7460 chr19 30477244 30477244 1 + T C COAD 30477253 + 30477233 30477273 41 TACTAATGAAGTCACTGTTTTACTGGGGGACAACTGGTTTG TACTAATGAAGCCACTGTTTTACTGGGGGACAACTGGTTTG < 41bp 1 0.331351897742465 1 0.998729586601257 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30477253 chr19:30477244 nonsynonymous SNV 0.998 3 12 hPsi_associated_SNPs_826 0 0 1 0 2 Cytosol 1 0.505586246246919 0.00254082679748602 0.988827507506162 hPsi_site_7460 iPseU_CNN:0.00254082679748602;iRNA_PseU:0.988827507506162 7461 chr13 32953557 32953557 1 + A C COAD 32953554 + 32953534 32953574 41 GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGG GTTGGAAATTAGGAAGGCCATGGCATCTGCTGAACAAAAGG < 41bp 1 0.100584494598274 1 0.000831156969070435 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32953554 chr13:32953557 nonsynonymous SNV 0.973 1 24 hPsi_associated_SNPs_827 0 0 1 0 0 Nucleus 1 0.454710591221335 1 1 hPsi_site_7461 iPseU_CNN:1;iRNA_PseU:1 7462 chr8 42012223 42012223 1 + C A COAD 42012221 + 42012201 42012241 41 CCACCATGATCCATAGTCTTTTCTTGATCAACTCCTCTGGA CCACCATGATCCATAGTCTTTTATTGATCAACTCCTCTGGA < 41bp 1 0.227351205088287 1 0.951416611671448 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42012221 chr8:42012223 nonsynonymous SNV 1.000 5 23 hPsi_associated_SNPs_828 0 0 1 1 0 Nucleus 1 0.438718592959521 0.097166776657104 1 hPsi_site_7462 iPseU_CNN:0.097166776657104;iRNA_PseU:1 7463 chr22 24967998 24967998 1 + C A COAD 24967978 + 24967958 24967998 41 AACAGAACTTTGTCCTTTTTTCTTTCAGGTTATCTGAGTTC AACAGAACTTTGTCCTTTTTTCTTTCAGGTTATCTGAGTTA < 41bp 1 0.14706218447762 1 0.999858379364014 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SNRPD3 ENSG00000100028 CDS Human protein_coding chr22:24967978 chr22:24967998 stopgain 0.040 0 41 hPsi_associated_SNPs_829 0 0 1 2 2 Ribosome 1 0.438724510517499 0.00028324127197199 1 hPsi_site_7463 iPseU_CNN:0.00028324127197199;iRNA_PseU:1 7464 chr11 122669690 122669690 1 + C A COAD 122669678 + 122669658 122669698 41 TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTC TTATTAGAGAGCAATACCATTATCGATCATGTATATTGCTC < 41bp 1 0.351731150967268 1 0.78292042016983 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122669678 chr11:122669690 synonymous SNV . 0 33 hPsi_associated_SNPs_830 0 0 0 0 2 Ribosome 1 0.436416763160687 0.43415915966034 1 hPsi_site_7464 iPseU_CNN:0.43415915966034;iRNA_PseU:1 7465 chr8 38095669 38095669 1 + G T COAD 38095652 + 38095632 38095672 41 CAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGT CAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCATGGT < 41bp 1 0.187170587560444 1 0.976098001003265 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095652 chr8:38095669 nonsynonymous SNV 0.684 4 38 hPsi_associated_SNPs_831 0 0 1 0 2 chromatin 1 0.438646965832495 0.0478039979934699 1 hPsi_site_7465 iPseU_CNN:0.0478039979934699;iRNA_PseU:1 7466 chr22 29695770 29695770 1 + G C COAD 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGCCCCCCTGGACCTTTGATGGAACAGATGGGAGG < 41bp 1 0.152918941044054 1 0.999833583831787 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695770 synonymous SNV . 0 9 hPsi_associated_SNPs_832 0 0 1 0 1 Cytosol 1 0.438720886960953 0.000332832336426003 1 hPsi_site_7466 iPseU_CNN:0.000332832336426003;iRNA_PseU:1 7467 chr9 27056348 27056348 1 + G A COAD 27056357 + 27056337 27056377 41 ACATCAGGAGAGAATGATATTATCAACCCACAGAAATGCCT ACATCAGGAGAAAATGATATTATCAACCCACAGAAATGCCT < 41bp 1 0.504749181201182 1 0.998583436012268 experiment 0.990501637597636 Functional Loss NA| IFT74 ENSG00000096872 CDS Human protein_coding chr9:27056357 chr9:27056348 nonsynonymous SNV 0.685 0 12 hPsi_associated_SNPs_833 0 0 0 0 1 Nucleus 1 0.743836470134117 0.00283312797546409 0.512327059731766 hPsi_site_7467 iPseU_CNN:0.00283312797546409;iRNA_PseU:0.512327059731766 7468 chr7 98942038 98942038 1 + G A COAD 98942047 + 98942027 98942067 41 GAATTAATCGCGCAGCTACTTTTGTGAAGTGGTCCCCCCTA GAATTAATCGCACAGCTACTTTTGTGAAGTGGTCCCCCCTA < 41bp 1 0.301080103474413 1 0.898196458816528 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98942047 chr7:98942038 nonsynonymous SNV 0.986 4 12 hPsi_associated_SNPs_834 0 0 1 2 0 Cytosol 1 0.466245343319442 0.203607082366944 1 hPsi_site_7468 iPseU_CNN:0.203607082366944;iRNA_PseU:1 7469 chr4 99273735 99273735 1 + A G COAD 99273729 + 99273709 99273749 41 GCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATA GCTTCAAACGGGCAGGGCTCTAGGAAGCATATGTTACGATA < 41bp 1 0.148240000384531 1 0.999076128005981 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAP1GDS1 ENSG00000138698 CDS Human protein_coding chr4:99273729 chr4:99273735 nonsynonymous SNV 1.000 4 27 hPsi_associated_SNPs_835 0 0 0 0 1 Ribosome 1 0.563220904470691 0.001847743988038 0.873558191058618 hPsi_site_7469 iPseU_CNN:0.001847743988038;iRNA_PseU:0.873558191058618 7470 chr8 95782778 95782778 1 + C A COAD 95782769 + 95782749 95782789 41 TCATGTAATTCACACTATTTTATTGGGTTCTCTTGCAATGG TCATGTAATTCACACTATTTTATTGGGTTATCTTGCAATGG < 41bp 1 0.312246573700571 1 0.853839516639709 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DPY19L4 ENSG00000156162 CDS Human protein_coding chr8:95782769 chr8:95782778 nonsynonymous SNV 1.000 1 30 hPsi_associated_SNPs_836 0 0 1 0 1 Endoplasmic reticulum 1 0.438720250082396 0.292320966720582 1 hPsi_site_7470 iPseU_CNN:0.292320966720582;iRNA_PseU:1 7471 chr11 4142950 4142950 1 + T C COAD 4142942 + 4142922 4142962 41 AGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCG AGCAGCGTGCCAGAGATCTTTTCTTTGCCCTTTGGATTCCG < 41bp 1 0.393926000955142 1 0.996697545051575 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142942 chr11:4142950 synonymous SNV . 0 29 hPsi_associated_SNPs_837 0 0 1 0 1 Nucleus 1 0.439536442282758 0.00660490989684992 1 hPsi_site_7471 iPseU_CNN:0.00660490989684992;iRNA_PseU:1 7472 chr3 169802275 169802275 1 + G A COAD 169802285 + 169802265 169802305 41 GCTTATTCTCGTCACTGTCCTTTCTATGTCAGCATTCAGAG GCTTATTCTCATCACTGTCCTTTCTATGTCAGCATTCAGAG < 41bp 1 0.201629307000762 1 0.99860680103302 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GPR160 ENSG00000173890 CDS Human protein_coding chr3:169802285 chr3:169802275 nonsynonymous SNV 0.001 0 11 hPsi_associated_SNPs_838 0 0 1 0 0 Cytosol 1 0.997414151894685 0.00278639793395996 0.00517169621063074 hPsi_site_7472 iPseU_CNN:0.00278639793395996;iRNA_PseU:0.00517169621063074 7473 chr14 104643572 104643572 1 + G A COAD 104643565 + 104643545 104643585 41 CACGGTCCAGCTCCCGCCTGTAGGAGCGGCGCAGCCAAGGC CACGGTCCAGCTCCCGCCTGTAGGAGCAGCGCAGCCAAGGC < 41bp 1 0.313201268673669 1 0.999752283096313 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104643565 chr14:104643572 nonsynonymous SNV 0.012 0 28 hPsi_associated_SNPs_839 0 0 0 0 0 Ribosome 1 0.437586746017165 0.000495433807373935 1 hPsi_site_7473 iPseU_CNN:0.000495433807373935;iRNA_PseU:1 7474 chr17 42152723 42152723 1 + G A COAD 42152737 + 42152717 42152757 41 TGGAGCGGGAGCTAAGCTTCTATGGGTTGACTGCACTGGCC TGGAGCAGGAGCTAAGCTTCTATGGGTTGACTGCACTGGCC < 41bp 1 0.35757465062327 1 0.999940872192383 experiment 1 Functional Loss NA| G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42152737 chr17:42152723 nonsynonymous SNV 0.999 2 7 hPsi_associated_SNPs_840 0 0 1 0 2 Ribosome 1 0.438718563262567 0.000118255615233931 1 hPsi_site_7474 iPseU_CNN:0.000118255615233931;iRNA_PseU:1 7475 chr1 981165 981165 1 + G A COAD 981180 + 981160 981200 41 ATGACGGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC ATGACAGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC < 41bp 1 0.383508319517693 1 0.968418061733246 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide AGRN ENSG00000188157 CDS Human protein_coding chr1:981180 chr1:981165 synonymous SNV . 0 6 hPsi_associated_SNPs_841 1 0 1 0 2 Endoplasmic reticulum 1 0.442843999318586 0.0631638765335081 1 hPsi_site_7475 iPseU_CNN:0.0631638765335081;iRNA_PseU:1 7476 chr1 27177674 27177674 1 + A G COAD 27177678 + 27177658 27177698 41 CCATTCTGGGCCTCTCAGGGTTTCACACGTACCTCGTCGCC CCATTCTGGGCCTCTCGGGGTTTCACACGTACCTCGTCGCC < 41bp 1 0.434132812077636 1 0.999999523162842 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZDHHC18 ENSG00000204160 CDS Human protein_coding chr1:27177678 chr1:27177674 synonymous SNV . 0 17 hPsi_associated_SNPs_842 0 0 1 0 1 Ribosome 1 0.4387185902449 9.53674315962161e-07 1 hPsi_site_7476 iPseU_CNN:9.53674315962161e-07;iRNA_PseU:1 7477 chr3 152553954 152553954 1 + G A DLBC 152553956 + 152553936 152553976 41 CCATGTGTAAACTGCAGAGGTTCATCTTTCATGTGAACCTC CCATGTGTAAACTGCAGAAGTTCATCTTTCATGTGAACCTC < 41bp 1 0.520558586808779 1 0.996919512748718 experiment 0.958882826382441 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553956 chr3:152553954 nonsynonymous SNV 0.998 4 19 hPsi_associated_SNPs_844 0 0 1 0 0 Endoplasmic reticulum 1 0.438718597168819 0.00616097450256392 1 hPsi_site_7477 iPseU_CNN:0.00616097450256392;iRNA_PseU:1 7478 chr19 1434903 1434903 1 + C T DLBC 1434892 + 1434872 1434912 41 GAACCACAACGTGCAAGGGTTCCACCCCTACCGACGCTAGC GAACCACAACGTGCAAGGGTTCCACCCCTACTGACGCTAGC < 41bp 1 0.699325737571239 1 0.994386553764343 experiment 0.601348524857523 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434892 chr19:1434903 stopgain 1.000 1 32 hPsi_associated_SNPs_845 0 0 1 0 0 chromatin 1 0.45203547130527 0.0112268924713139 1 hPsi_site_7478 iPseU_CNN:0.0112268924713139;iRNA_PseU:1 7479 chr5 134296332 134296332 1 + G A DLBC 134296343 + 134296323 134296363 41 AGATGTGAAGCTGGCCAAGTTTATTGAAAAAGCAGCTGCTT AGATGTGAAACTGGCCAAGTTTATTGAAAAAGCAGCTGCTT < 41bp 1 0.416073770509529 1 0.9830561876297 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCBD2 ENSG00000132570 CDS Human protein_coding chr5:134296343 chr5:134296332 synonymous SNV . 0 10 hPsi_associated_SNPs_846 0 0 1 0 1 Nucleus 1 0.549623953488008 0.0338876247405999 0.900752093023984 hPsi_site_7479 iPseU_CNN:0.0338876247405999;iRNA_PseU:0.900752093023984 7480 chr20 18492908 18492908 1 + C T DLBC 18492905 + 18492885 18492925 41 GCAAAACTTTGGGCCTGTAATTTCTGTTTTCAAAGAAATCA GCAAAACTTTGGGCCTGTAATTTTTGTTTTCAAAGAAATCA < 41bp 1 0.36403718925196 1 0.985582172870636 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SEC23B ENSG00000101310 CDS Human protein_coding chr20:18492905 chr20:18492908 synonymous SNV . 0 24 hPsi_associated_SNPs_847 0 0 1 0 2 Cytosol 1 0.499581462775494 0.028835654258728 1 hPsi_site_7480 iPseU_CNN:0.028835654258728;iRNA_PseU:1 7481 chr16 89629371 89629371 1 + G A DLBC 89629388 + 89629368 89629408 41 CCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGA CCCATGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGA < 41bp 1 0.16802346235653 1 0.998807191848755 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629388 chr16:89629371 nonsynonymous SNV 0.851 1 4 hPsi_associated_SNPs_848 0 0 0 0 1 Cytosol 1 0.446508109307896 0.00238561630249001 1 hPsi_site_7481 iPseU_CNN:0.00238561630249001;iRNA_PseU:1 7482 chr10 75867026 75867026 1 + C T ESCA 75867017 + 75866997 75867037 41 AGAGCTTCCTGGACTCAGGATATCGGATCCTGGGAGCTGTG AGAGCTTCCTGGACTCAGGATATCGGATCTTGGGAGCTGTG < 41bp 1 0.413595605130955 1 0.998449802398682 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75867017 chr10:75867026 synonymous SNV . 0 30 hPsi_associated_SNPs_849 0 0 1 0 2 Nucleus 1 0.524894774054948 0.00310039520263605 0.950210451890104 hPsi_site_7482 iPseU_CNN:0.00310039520263605;iRNA_PseU:0.950210451890104 7483 chr12 994904 994904 1 + A G ESCA 994916 + 994896 994936 41 ACAACCCAAAGCTCCTGGAATTGATGACATAAAGACTCTAG ACAACCCAGAGCTCCTGGAATTGATGACATAAAGACTCTAG < 41bp 1 0.337505851511159 1 0.999988257884979 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WNK1 ENSG00000060237 CDS Human protein_coding chr12:994916 chr12:994904 nonsynonymous SNV 1.000 4 9 hPsi_associated_SNPs_850 0 0 1 0 0 Ribosome 1 0.438718589855333 2.3484230041948e-05 1 hPsi_site_7483 iPseU_CNN:2.3484230041948e-05;iRNA_PseU:1 7484 chr17 78085835 78085835 1 + T C ESCA 78085836 + 78085816 78085856 41 CTGTGCCTCCAGCCACCAGTTTCTCTCCACACACTACAACC CTGTGCCTCCAGCCACCAGCTTCTCTCCACACACTACAACC < 41bp 1 0.635728683434806 1 0.370234429836273 experiment 0.728542633130387 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78085836 chr17:78085835 nonsynonymous SNV 0.973 1 20 hPsi_associated_SNPs_851 0 0 1 0 2 Endoplasmic reticulum 1 0.444406855492832 1 1 hPsi_site_7484 iPseU_CNN:1;iRNA_PseU:1 7485 chr9 131133692 131133692 1 + C T ESCA 131133679 + 131133659 131133699 41 CATGGCTGCGCCCTTGTCAGTGGAGGTGGAGTTCGGGTGAG CATGGCTGCGCCCTTGTCAGTGGAGGTGGAGTTTGGGTGAG < 41bp 1 0.139011309328531 1 0.861513137817383 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide URM1 ENSG00000167118 CDS Human protein_coding chr9:131133679 chr9:131133692 synonymous SNV . 0 34 hPsi_associated_SNPs_852 0 0 1 1 1 Ribosome 1 0.455063534461701 0.276973724365234 1 hPsi_site_7485 iPseU_CNN:0.276973724365234;iRNA_PseU:1 7486 chr6 44394257 44394257 1 + G A ESCA 44394271 + 44394251 44394291 41 AGAACCGCCTTTAACAGATTTACAGAAAAGTGAAGAACTAA AGAACCACCTTTAACAGATTTACAGAAAAGTGAAGAACTAA < 41bp 1 0.534092241465301 1 0.934704661369324 experiment 0.931815517069398 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CDC5L ENSG00000096401 CDS Human protein_coding chr6:44394271 chr6:44394257 synonymous SNV . 0 7 hPsi_associated_SNPs_853 0 0 1 0 1 Nucleus 1 0.673276919434639 0.130590677261352 0.653446161130722 hPsi_site_7486 iPseU_CNN:0.130590677261352;iRNA_PseU:0.653446161130722 7487 chr2 74649396 74649396 1 + G A ESCA 74649377 + 74649357 74649397 41 TGCCGGCTCGCAACCTCACGTATTTTGGCGTGGTTCATGGA TGCCGGCTCGCAACCTCACGTATTTTGGCGTGGTTCATGAA < 41bp 1 0.350678642329683 1 0.563353419303894 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDR54 ENSG00000005448 CDS Human protein_coding chr2:74649377 chr2:74649396 nonsynonymous SNV 0.999 1 40 hPsi_associated_SNPs_854 0 0 1 0 0 nucleus 1 0.43871639525763 0.873293161392212 1 hPsi_site_7487 iPseU_CNN:0.873293161392212;iRNA_PseU:1 7488 chr20 44047496 44047496 1 + G T ESCA 44047502 + 44047482 44047522 41 CTCTATCCAGTGTGGATAAATCTTGGAAGGAGCTCAGTAAT CTCTATCCAGTGTGTATAAATCTTGGAAGGAGCTCAGTAAT < 41bp 1 0.0243426503469274 1 0.996974945068359 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PIGT ENSG00000124155 CDS Human protein_coding chr20:44047502 chr20:44047496 nonsynonymous SNV 1.000 3 15 hPsi_associated_SNPs_855 0 0 1 0 1 Ribosome 1 0.438658736686796 0.00605010986328192 1 hPsi_site_7488 iPseU_CNN:0.00605010986328192;iRNA_PseU:1 7489 chr12 53670934 53670934 1 + A G ESCA 53670944 + 53670924 53670964 41 GGCCCAGGCCAGAGATCAGCTTCTGGACGATAAAGCACAGG GGCCCAGGCCGGAGATCAGCTTCTGGACGATAAAGCACAGG < 41bp 1 0.161955932151127 1 0.996489882469177 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53670944 chr12:53670934 nonsynonymous SNV 0.013 0 11 hPsi_associated_SNPs_856 0 0 1 0 2 Nucleus 1 0.438718620784577 0.00702023506164595 1 hPsi_site_7489 iPseU_CNN:0.00702023506164595;iRNA_PseU:1 7490 chr17 61883937 61883937 1 + C T ESCA 61883941 + 61883921 61883961 41 AGGAAGTAGCTTTGCTCATTTTGGGTTTGACGAACAACTTA AGGAAGTAGCTTTGCTTATTTTGGGTTTGACGAACAACTTA < 41bp 1 0.244877719318273 1 0.999476075172424 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DDX42 ENSG00000198231 CDS Human protein_coding chr17:61883941 chr17:61883937 nonsynonymous SNV 1.000 2 17 hPsi_associated_SNPs_857 0 0 1 0 2 chromatin 1 0.444587776588624 0.00104784965515203 1 hPsi_site_7490 iPseU_CNN:0.00104784965515203;iRNA_PseU:1 7491 chr17 59152324 59152324 1 + T G ESCA 59152309 + 59152289 59152329 41 CCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACGA CCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCGTACGA < 41bp 1 0.676668852128035 1 0.892196238040924 experiment 0.646662295743931 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59152309 chr17:59152324 synonymous SNV . 0 36 hPsi_associated_SNPs_858 0 0 0 0 2 Cytosol 1 0.439892358374322 0.215607523918152 1 hPsi_site_7491 iPseU_CNN:0.215607523918152;iRNA_PseU:1 7492 chr12 57627050 57627050 1 + C A ESCA 57627054 + 57627034 57627074 41 CATTTGAGGACCGAATCAACTTTGCCGTGTTCCCATCCCTG CATTTGAGGACCGAATAAACTTTGCCGTGTTCCCATCCCTG < 41bp 1 0.315977872277494 1 0.888055562973022 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627054 chr12:57627050 synonymous SNV . 0 17 hPsi_associated_SNPs_859 0 0 1 0 2 Cytosol 1 0.468334690746943 0.223888874053956 1 hPsi_site_7492 iPseU_CNN:0.223888874053956;iRNA_PseU:1 7493 chr14 45542728 45542728 1 + G C ESCA 45542732 + 45542712 45542752 41 TCAAAAAGAGTTTGGAGGAATTACTCGATATGACAATTTTA TCAAAAAGAGTTTGGACGAATTACTCGATATGACAATTTTA < 41bp 1 0.208666849640585 1 0.157322585582733 experiment 1 Functional Loss NA| TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45542732 chr14:45542728 nonsynonymous SNV 0.995 1 17 hPsi_associated_SNPs_860 0 0 0 0 0 unknown 1 0.446784471356356 1 1 hPsi_site_7493 iPseU_CNN:1;iRNA_PseU:1 7494 chr16 14989410 14989410 1 + G T ESCA 14989392 + 14989372 14989412 41 TCATTCCTTTGCTGCTGCAGTTGACAAGCCGGCTACAGGGA TCATTCCTTTGCTGCTGCAGTTGACAAGCCGGCTACAGTGA < 41bp 1 0.429661020098008 1 0.999525547027588 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14989392 chr16:14989410 stopgain 0.433 1 39 hPsi_associated_SNPs_861 0 0 1 0 1 Nucleus 1 0.528892725345555 0.000948905944823997 0.942214549308889 hPsi_site_7494 iPseU_CNN:0.000948905944823997;iRNA_PseU:0.942214549308889 7495 chr12 58176601 58176601 1 + C T ESCA 58176586 + 58176566 58176606 41 GTTTATCGCGGCTAGAGAGATGTCGCTGCTGCGGTCGCTGC GTTTATCGCGGCTAGAGAGATGTCGCTGCTGCGGTTGCTGC < 41bp 1 0.262673749536645 1 0.962303698062897 experiment 1 Functional Loss NA| TSFM ENSG00000123297 CDS Human protein_coding chr12:58176586 chr12:58176601 nonsynonymous SNV 0.086 1 36 hPsi_associated_SNPs_862 0 0 1 0 1 Cytosol 1 0.651392280543047 0.0753926038742061 0.697215438913906 hPsi_site_7495 iPseU_CNN:0.0753926038742061;iRNA_PseU:0.697215438913906 7496 chr5 33448779 33448779 1 + A G ESCA 33448766 + 33448746 33448786 41 AGCAAGCCAATTAAAGTCACTTTGCCTGATGGTAAACAGGT AGCAAGCCAATTAAAGTCACTTTGCCTGATGGTGAACAGGT < 41bp 1 0.427982524781781 1 0.810953617095947 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33448766 chr5:33448779 nonsynonymous SNV 1.000 1 34 hPsi_associated_SNPs_863 0 0 1 0 1 Nucleus 1 0.437967618157904 0.378092765808106 1 hPsi_site_7496 iPseU_CNN:0.378092765808106;iRNA_PseU:1 7497 chr2 233321734 233321734 1 + G A ESCA 233321719 + 233321699 233321739 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACAACACG < 41bp 1 0.526449722129829 1 0.977376937866211 experiment 0.947100555740342 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPI ENSG00000163295 CDS Human protein_coding chr2:233321719 chr2:233321734 synonymous SNV . 0 36 hPsi_associated_SNPs_864 0 0 1 0 1 Cytosol 1 0.43871865511892 0.0452461242675779 1 hPsi_site_7497 iPseU_CNN:0.0452461242675779;iRNA_PseU:1 7498 chr19 40883777 40883777 1 + C T ESCA 40883773 + 40883753 40883793 41 CACAACAAGTACATGGTGACTGAACGCGCCACCTACATCGG CACAACAAGTACATGGTGACTGAATGCGCCACCTACATCGG < 41bp 1 0.360987673178697 1 0.999795317649841 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883773 chr19:40883777 nonsynonymous SNV 0.960 3 25 hPsi_associated_SNPs_865 0 0 1 0 2 Endoplasmic reticulum 1 0.962459547659906 0.000409364700318049 0.0750809046801879 hPsi_site_7498 iPseU_CNN:0.000409364700318049;iRNA_PseU:0.0750809046801879 7499 chr11 70049577 70049577 1 + C G ESCA 70049575 + 70049555 70049595 41 CAGACCCCGCCATGGACCCGTTCCTGGTGCTGCTGCACTCG CAGACCCCGCCATGGACCCGTTGCTGGTGCTGCTGCACTCG < 41bp 1 0.488759190643585 1 0.997381806373596 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FADD ENSG00000168040 CDS Human protein_coding chr11:70049575 chr11:70049577 nonsynonymous SNV 0.998 3 23 hPsi_associated_SNPs_866 0 0 1 0 0 Ribosome 1 0.438808642861313 0.00523638725280806 1 hPsi_site_7499 iPseU_CNN:0.00523638725280806;iRNA_PseU:1 7500 chr12 101683933 101683933 1 + C A ESCA 101683941 + 101683921 101683961 41 GATAAAAACGCACTTTTCAATTTAATGTTTCTTGATCTTGA GATAAAAACGCAATTTTCAATTTAATGTTTCTTGATCTTGA < 41bp 1 0.667002836861647 1 0.998761236667633 experiment 0.665994326276706 Functional Loss NA| UTP20 ENSG00000120800 CDS Human protein_coding chr12:101683941 chr12:101683933 nonsynonymous SNV 1.000 4 13 hPsi_associated_SNPs_867 0 0 1 0 1 Cytosol 1 0.43871606836939 0.00247752666473411 1 hPsi_site_7500 iPseU_CNN:0.00247752666473411;iRNA_PseU:1 7501 chr7 104750981 104750981 1 + C G ESCA 104750961 + 104750941 104750981 41 GTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATC GTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATG < 41bp 1 0.0161094920936381 1 0.997514724731445 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock KMT2E ENSG00000005483 CDS Human protein_coding chr7:104750961 chr7:104750981 nonsynonymous SNV 1.000 2 41 hPsi_associated_SNPs_868 0 0 1 1 2 Cytosol 1 0.455226819433137 0.00497055053711004 1 hPsi_site_7501 iPseU_CNN:0.00497055053711004;iRNA_PseU:1 7502 chr6 348890 348890 1 + G A ESCA 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCAGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG < 41bp 1 0.368187933945604 1 0.999921917915344 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348890 nonsynonymous SNV 0.847 0 10 hPsi_associated_SNPs_869 0 0 1 0 0 Ribosome 1 0.439167330900764 0.000156164169311968 1 hPsi_site_7502 iPseU_CNN:0.000156164169311968;iRNA_PseU:1 7503 chr1 6692962 6692962 1 + T C GBM 6692975 + 6692955 6692995 41 TATGCCCTTTTGGACTTAGATTCCCTGAAGAAAAAACTCTT TATGCCCCTTTGGACTTAGATTCCCTGAAGAAAAAACTCTT < 41bp 1 0.505697116362501 1 0.981477737426758 experiment 0.988605767274999 Functional Loss NA| THAP3 ENSG00000041988 CDS Human protein_coding chr1:6692975 chr1:6692962 nonsynonymous SNV 1.000 4 8 hPsi_associated_SNPs_870 0 0 1 0 0 Ribosome 1 0.43871859297369 0.0370445251464839 1 hPsi_site_7503 iPseU_CNN:0.0370445251464839;iRNA_PseU:1 7504 chr12 57627055 57627055 1 + T C GBM 57627054 + 57627034 57627074 41 CATTTGAGGACCGAATCAACTTTGCCGTGTTCCCATCCCTG CATTTGAGGACCGAATCAACTCTGCCGTGTTCCCATCCCTG < 41bp 1 0.321052855771227 1 0.97958779335022 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627054 chr12:57627055 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_871 0 0 1 0 2 Cytosol 1 0.523452089538173 0.0408244132995601 0.953095820923654 hPsi_site_7504 iPseU_CNN:0.0408244132995601;iRNA_PseU:0.953095820923654 7505 chr12 53670926 53670926 1 + C A GBM 53670944 + 53670924 53670964 41 GGCCCAGGCCAGAGATCAGCTTCTGGACGATAAAGCACAGG GGACCAGGCCAGAGATCAGCTTCTGGACGATAAAGCACAGG < 41bp 1 0.356463396185584 1 0.990146100521088 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53670944 chr12:53670926 nonsynonymous SNV 0.060 0 3 hPsi_associated_SNPs_872 0 0 1 0 2 Nucleus 1 0.439102903573628 0.019707798957824 1 hPsi_site_7505 iPseU_CNN:0.019707798957824;iRNA_PseU:1 7506 chr1 230371777 230371777 1 + G A GBM 230371783 + 230371763 230371803 41 TCAGCGGAAGCAGTGGCGGGTGGATCTGCCGGCCACCAGCG TCAGCGGAAGCAGTAGCGGGTGGATCTGCCGGCCACCAGCG < 41bp 1 0.610988205930095 1 0.993076324462891 experiment 0.778023588139811 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371783 chr1:230371777 stopgain 0.996 0 15 hPsi_associated_SNPs_873 0 0 1 0 2 Endoplasmic reticulum 1 0.438584224359146 0.0138473510742181 1 hPsi_site_7506 iPseU_CNN:0.0138473510742181;iRNA_PseU:1 7507 chr7 104750976 104750976 1 + T C GBM 104750961 + 104750941 104750981 41 GTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATC GTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCCTCATC < 41bp 1 0.0947515276042127 1 0.998799085617065 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock KMT2E ENSG00000005483 CDS Human protein_coding chr7:104750961 chr7:104750976 synonymous SNV . 0 36 hPsi_associated_SNPs_875 0 0 1 1 2 Cytosol 1 0.79433811566984 0.00240182876587003 0.41132376866032 hPsi_site_7507 iPseU_CNN:0.00240182876587003;iRNA_PseU:0.41132376866032 7508 chr2 233321701 233321701 1 + G T GBM 233321719 + 233321699 233321739 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTTAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG < 41bp 1 0.46739384078077 1 0.9901362657547 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPI ENSG00000163295 CDS Human protein_coding chr2:233321719 chr2:233321701 nonsynonymous SNV 0.105 4 3 hPsi_associated_SNPs_876 0 0 0 0 2 Cytosol 1 0.438719106995331 0.0197274684905999 1 hPsi_site_7508 iPseU_CNN:0.0197274684905999;iRNA_PseU:1 7509 chr7 5959509 5959509 1 + C T GBM 5959503 + 5959483 5959523 41 CTGTCCACCCAACGTTGGATTTTTGCCGAAGACTGGACAGC CTGTCCACCCAACGTTGGATTTTTGCTGAAGACTGGACAGC < 41bp 1 0.354871830315878 1 0.997514367103577 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CCZ1 ENSG00000122674 CDS Human protein_coding chr7:5959503 chr7:5959509 stopgain 1.000 1 27 hPsi_associated_SNPs_877 0 0 0 0 2 Ribosome 1 0.438718504148593 0.00497126579284601 1 hPsi_site_7509 iPseU_CNN:0.00497126579284601;iRNA_PseU:1 7510 chr2 233244353 233244353 1 + G A GBM 233244333 + 233244313 233244353 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACA < 41bp 1 0.531027743109743 1 0.989454507827759 experiment 0.937944513780515 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPP ENSG00000163283 CDS Human protein_coding chr2:233244333 chr2:233244353 nonsynonymous SNV 0.194 1 41 hPsi_associated_SNPs_878 0 0 0 0 1 Endoplasmic reticulum 1 0.445565710060624 0.021090984344482 1 hPsi_site_7510 iPseU_CNN:0.021090984344482;iRNA_PseU:1 7511 chr2 207425880 207425880 1 + A T GBM 207425894 + 207425874 207425914 41 AGAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC AGAAGCTGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC < 41bp 1 0.437385527633016 1 0.868547141551971 experiment 1 Functional Loss NA| ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207425894 chr2:207425880 nonsynonymous SNV 1.000 4 7 hPsi_associated_SNPs_879 0 0 1 0 2 Ribosome 1 0.883377373218762 0.262905716896058 0.233245253562476 hPsi_site_7511 iPseU_CNN:0.262905716896058;iRNA_PseU:0.233245253562476 7512 chr19 46198855 46198855 1 + C T GBM 46198863 + 46198843 46198883 41 GCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC GCCATTATGACTTGAAGCTCTTCCCACCCGGATCGACCCCC < 41bp 1 0.525822344213954 1 0.00890666246414185 experiment 0.948355311572092 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198863 chr19:46198855 nonsynonymous SNV 0.978 4 13 hPsi_associated_SNPs_881 0 0 1 0 0 chromatin 1 0.441236487142616 1 1 hPsi_site_7512 iPseU_CNN:1;iRNA_PseU:1 7513 chr18 73000332 73000332 1 + G T GBM 73000352 + 73000332 73000372 41 GACACACTTGGGCTTCAGCCTGAAGGATCTCTCCAAGCTGC TACACACTTGGGCTTCAGCCTGAAGGATCTCTCCAAGCTGC < 41bp 1 0.236638822249652 1 0.992340803146362 experiment 1 Functional Loss NA| TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:73000352 chr18:73000332 nonsynonymous SNV 0.998 4 1 hPsi_associated_SNPs_882 0 0 1 0 0 Cytosol 1 0.438476524636527 0.0153183937072761 1 hPsi_site_7513 iPseU_CNN:0.0153183937072761;iRNA_PseU:1 7514 chr4 129128456 129128456 1 + C A GBM 129128454 + 129128434 129128474 41 TTTTGGGCTTATTTGAAATATTCTCAATCTAAGACACAGTC TTTTGGGCTTATTTGAAATATTATCAATCTAAGACACAGTC < 41bp 1 0.4931197329437 1 0.999611258506775 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LARP1B ENSG00000138709 CDS Human protein_coding chr4:129128454 chr4:129128456 nonsynonymous SNV 0.923 3 23 hPsi_associated_SNPs_883 0 0 0 2 2 Nucleus 1 0.438700433255725 0.000777482986449973 1 hPsi_site_7514 iPseU_CNN:0.000777482986449973;iRNA_PseU:1 7515 chrX 48339874 48339874 1 + G A GBM 48339862 + 48339842 48339882 41 TCTACAGCCAGCTGCAGGTCTTCTTCTCCAGCGTGCTGTGT TCTACAGCCAGCTGCAGGTCTTCTTCTCCAGCATGCTGTGT < 41bp 1 0.605755499967218 1 0.990534424781799 experiment 0.788489000065563 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48339862 chrX:48339874 nonsynonymous SNV 0.990 4 33 hPsi_associated_SNPs_885 0 0 1 0 2 Ribosome 1 0.470477356178601 0.018931150436402 1 hPsi_site_7515 iPseU_CNN:0.018931150436402;iRNA_PseU:1 7516 chr2 179365815 179365815 1 + A T GBM 179365814 + 179365794 179365834 41 CCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTCT CCACTCTATAAAAGAACCAGTTTCTACACTTCACCGACTCT < 41bp 1 0.550708282864479 1 0.997709929943085 experiment 0.898583434271042 Functional Loss NA| PLEKHA3 ENSG00000116095 CDS Human protein_coding chr2:179365814 chr2:179365815 synonymous SNV . 0 22 hPsi_associated_SNPs_886 0 0 1 0 2 Ribosome 1 0.438718549559531 0.0045801401138299 1 hPsi_site_7516 iPseU_CNN:0.0045801401138299;iRNA_PseU:1 7517 chr5 70945048 70945048 1 + C T GBM 70945064 + 70945044 70945084 41 GAGCCGGAAACTATGGGATGTGTGGCAGAGCATATAGGTAG GAGCTGGAAACTATGGGATGTGTGGCAGAGCATATAGGTAG < 41bp 1 0.278123709681974 1 0.94979989528656 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70945064 chr5:70945048 synonymous SNV . 0 5 hPsi_associated_SNPs_887 0 0 1 0 1 Ribosome 1 0.453755666719874 0.10040020942688 1 hPsi_site_7517 iPseU_CNN:0.10040020942688;iRNA_PseU:1 Succinate-semialdehyde dehydrogenase deficiency Succinate-semialdehyde dehydrogenase deficiency 7518 chr20 3017903 3017903 1 + C T GBM 3017901 + 3017881 3017921 41 CTTCCAGACTGTCAAGAGCCTGCGGCTACAGAGGCCACACA CTTCCAGACTGTCAAGAGCCTGTGGCTACAGAGGCCACACA < 41bp 1 0.319790479253752 1 0.976181864738464 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PTPRA ENSG00000132670 CDS Human protein_coding chr20:3017901 chr20:3017903 nonsynonymous SNV 0.973 4 23 hPsi_associated_SNPs_888 0 0 1 0 1 Ribosome 1 0.51267207339916 0.047636270523072 0.97465585320168 hPsi_site_7518 iPseU_CNN:0.047636270523072;iRNA_PseU:0.97465585320168 7519 chr5 118862833 118862833 1 + T C GBM 118862835 + 118862815 118862855 41 TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTATATCCAG TTCTTTTTTAAAGGCTCGCTTTGCAAAACCAGTATATCCAG < 41bp 1 0.440249180982205 1 0.972661852836609 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118862835 chr5:118862833 synonymous SNV . 0 19 hPsi_associated_SNPs_891 0 0 1 0 2 Cytosol 1 0.483605795105294 0.054676294326782 1 hPsi_site_7519 iPseU_CNN:0.054676294326782;iRNA_PseU:1 7520 chr2 32667454 32667454 1 + G A GBM 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACATCGTACATGTTTGCTTCTTTGAGGCAGGACGAAGTATA < 41bp 1 0.60717986839538 1 0.993873000144958 experiment 0.78564026320924 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667454 nonsynonymous SNV 0.993 3 10 hPsi_associated_SNPs_892 0 0 1 0 2 Nucleus 1 0.439163193062343 0.0122539997100839 1 hPsi_site_7520 iPseU_CNN:0.0122539997100839;iRNA_PseU:1 7521 chr19 16338434 16338434 1 + A G GBM 16338424 + 16338404 16338444 41 AGTGTGTGCGGCTATCACGCTTCGAGAATGACCGCACCATC AGTGTGTGCGGCTATCACGCTTCGAGAATGGCCGCACCATC < 41bp 1 0.326600869900699 1 0.998820662498474 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338424 chr19:16338434 nonsynonymous SNV 0.997 4 31 hPsi_associated_SNPs_895 0 0 1 0 2 Ribosome 1 0.468594622033222 0.00235867500305198 1 hPsi_site_7521 iPseU_CNN:0.00235867500305198;iRNA_PseU:1 7522 chr2 73446076 73446076 1 + A T GBM 73446068 + 73446048 73446088 41 GCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATC GCCCCTGGTGGCTGCACAGTTTCTCTGGTATGCACTTTATC < 41bp 1 0.468289104729637 1 0.984396636486053 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73446068 chr2:73446076 nonsynonymous SNV 1.000 4 29 hPsi_associated_SNPs_896 0 0 0 0 2 Ribosome 1 0.93306964007816 0.031206727027894 0.13386071984368 hPsi_site_7522 iPseU_CNN:0.031206727027894;iRNA_PseU:0.13386071984368 7523 chr6 24503583 24503583 1 + C T GBM 24503574 + 24503554 24503594 41 TCTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACAC TCTGAGGAAGCCCGCCGTGTTTACGGAGATATTATCCACAC < 41bp 1 0.393887781692188 1 0.994724035263062 experiment 1 Functional Loss NA| ALDH5A1 ENSG00000112294 CDS Human protein_coding chr6:24503574 chr6:24503583 synonymous SNV . 0 30 hPsi_associated_SNPs_897 0 0 1 0 2 Nucleus 1 0.4439973726702 0.0105519294738761 1 hPsi_site_7523 iPseU_CNN:0.0105519294738761;iRNA_PseU:1 7524 chr22 29695792 29695792 1 + C A GBM 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGGCCCCCTGGACCTTTGATGGAAAAGATGGGAGG < 41bp 1 0.378600959210132 1 0.999092102050781 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695792 nonsynonymous SNV 1.000 2 31 hPsi_associated_SNPs_898 0 0 1 0 1 Cytosol 1 0.438718602664908 0.00181579589843794 1 hPsi_site_7524 iPseU_CNN:0.00181579589843794;iRNA_PseU:1 7525 chr17 39973381 39973381 1 + T C GBM 39973390 + 39973370 39973410 41 GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC GGACCGAGGCCCCATGGGCATGTGTGTCAACGAGCGGCGAC < 41bp 1 0.456876597325766 1 0.999918103218079 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39973390 chr17:39973381 nonsynonymous SNV 0.999 4 12 hPsi_associated_SNPs_899 0 0 1 0 2 Nucleus 1 0.438408995447856 0.000163793563842107 1 hPsi_site_7525 iPseU_CNN:0.000163793563842107;iRNA_PseU:1 7526 chr6 31931195 31931195 1 + T G GBM 31931212 + 31931192 31931232 41 GGCTGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACC GGCGGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACC < 41bp 1 0.527180812126303 1 0.996518969535828 experiment 0.945638375747394 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31931212 chr6:31931195 nonsynonymous SNV 0.985 3 4 hPsi_associated_SNPs_901 0 0 1 0 1 chromatin 1 0.457177048329164 0.00696206092834406 1 hPsi_site_7526 iPseU_CNN:0.00696206092834406;iRNA_PseU:1 7527 chr20 37137827 37137827 1 + G A GBM 37137815 + 37137795 37137835 41 AGAAATGGATAATGAGTGTGTTGCACAGACATGGTTTCGCT AGAAATGGATAATGAGTGTGTTGCACAGACATAGTTTCGCT < 41bp 1 0.59890896464676 1 0.776573419570923 experiment 0.802182070706479 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37137815 chr20:37137827 stopgain 1.000 1 33 hPsi_associated_SNPs_902 0 0 1 0 1 Nucleus 1 0.805080764514274 0.446853160858154 0.389838470971453 hPsi_site_7527 iPseU_CNN:0.446853160858154;iRNA_PseU:0.389838470971453 7528 chr2 171818187 171818187 1 + C T GBM 171818194 + 171818174 171818214 41 TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGT TGTACCAACAGTATCGTTATTGCCACCACAAGTAAACCAGT < 41bp 1 0.35153528004253 1 0.972439110279083 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818194 chr2:171818187 nonsynonymous SNV 0.998 3 14 hPsi_associated_SNPs_903 0 0 1 0 2 Ribosome 1 0.925980768227352 0.0551217794418339 0.148038463545296 hPsi_site_7528 iPseU_CNN:0.0551217794418339;iRNA_PseU:0.148038463545296 7529 chr19 32844107 32844107 1 + C A GBM 32844122 + 32844102 32844142 41 TATGTCTTATCAGTGTAGCCTTTGTAAGTTTCTATCATCAT TATGTATTATCAGTGTAGCCTTTGTAAGTTTCTATCATCAT < 41bp 1 0.587685660512283 1 0.974715769290924 experiment 0.824628678975434 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32844122 chr19:32844107 nonsynonymous SNV 1.000 2 6 hPsi_associated_SNPs_904 0 0 1 0 0 Cytosol 1 0.438737718888972 0.0505684614181521 1 hPsi_site_7529 iPseU_CNN:0.0505684614181521;iRNA_PseU:1 7530 chr3 23959350 23959350 1 + G A HNSC 23959342 + 23959322 23959362 41 ACACAGTTTGATTTCACAGGTAAGCCAAGATGGGTGCATAC ACACAGTTTGATTTCACAGGTAAGCCAAAATGGGTGCATAC < 41bp 1 0.694787393003797 1 0.975777328014374 experiment 0.610425213992407 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control RPL15 ENSG00000174748 UTR5 Human protein_coding chr3:23959342 chr3:23959350 . . 0 29 hPsi_associated_SNPs_905 0 0 1 0 2 Cytosol 1 0.918189365951165 0.048445343971252 0.163621268097671 hPsi_site_7530 iPseU_CNN:0.048445343971252;iRNA_PseU:0.163621268097671 7531 chr10 3154456 3154456 1 + G C HNSC 3154464 + 3154444 3154484 41 AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGTGAGG AGGAGATTTCAACATGCGGTTCGACTCCGAGGGAGGTGAGG < 41bp 1 0.465291381642144 1 0.917659401893616 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PFKP ENSG00000067057 CDS Human protein_coding chr10:3154464 chr10:3154456 nonsynonymous SNV 0.004 0 13 hPsi_associated_SNPs_906 0 0 1 0 2 Nucleus 1 0.438345606219496 0.164681196212768 1 hPsi_site_7531 iPseU_CNN:0.164681196212768;iRNA_PseU:1 7532 chr1 46079780 46079780 1 + A C HNSC 46079797 + 46079777 46079817 41 GAAAATGAGGAGGAGGAGATTGGGAACCTAGAGCTTGCCTG GAACATGAGGAGGAGGAGATTGGGAACCTAGAGCTTGCCTG < 41bp 1 0.345407819684 1 0.995026469230652 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NASP ENSG00000132780 CDS Human protein_coding chr1:46079797 chr1:46079780 nonsynonymous SNV 1.000 5 4 hPsi_associated_SNPs_907 0 0 1 0 1 Nucleus 1 0.438726446604241 0.00994706153869607 1 hPsi_site_7532 iPseU_CNN:0.00994706153869607;iRNA_PseU:1 7533 chr16 2817149 2817149 1 + G C HNSC 2817162 + 2817142 2817182 41 GCTGCAAGAATGTCCCAGGTTCCAGCCCCGGTGCCTCTCAT GCTGCAACAATGTCCCAGGTTCCAGCCCCGGTGCCTCTCAT < 41bp 1 0.594301932769962 1 0.994176506996155 experiment 0.811396134460076 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2817162 chr16:2817149 nonsynonymous SNV 1.000 3 8 hPsi_associated_SNPs_908 0 0 1 0 0 Nucleus 1 0.438734974123044 0.01164698600769 1 hPsi_site_7533 iPseU_CNN:0.01164698600769;iRNA_PseU:1 7534 chr2 179365828 179365828 1 + C T HNSC 179365814 + 179365794 179365834 41 CCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTCT CCACTCTATAAAAGAACCAGTATCTACACTTCACTGACTCT < 41bp 1 0.464779637970853 1 0.999667346477509 experiment 1 Functional Loss NA| PLEKHA3 ENSG00000116095 CDS Human protein_coding chr2:179365814 chr2:179365828 stopgain 0.998 0 35 hPsi_associated_SNPs_909 0 0 1 0 2 Ribosome 1 0.438718588548158 0.000665307044982022 1 hPsi_site_7534 iPseU_CNN:0.000665307044982022;iRNA_PseU:1 7535 chr14 64936395 64936395 1 + G C HNSC 64936399 + 64936379 64936419 41 AACAATCTTCTACAGTGACTTACTCTCCAGAGTCACGGCAG AACAATCTTCTACAGTCACTTACTCTCCAGAGTCACGGCAG < 41bp 1 0.535740061318987 1 0.999984622001648 experiment 0.928519877362026 Functional Loss NA| AKAP5 ENSG00000179841 CDS Human protein_coding chr14:64936399 chr14:64936395 stoploss 0.998 0 17 hPsi_associated_SNPs_910 0 0 0 0 0 Nucleus 1 0.441544165173985 3.07559967041016e-05 1 hPsi_site_7535 iPseU_CNN:3.07559967041016e-05;iRNA_PseU:1 7536 chr14 105995411 105995411 1 + C T HNSC 105995409 + 105995389 105995429 41 GCTACGCCATGATCCTGTGGTTCCTTTACATCTTCGTGCTG GCTACGCCATGATCCTGTGGTTTCTTTACATCTTCGTGCTG < 41bp 1 0.457175399424093 1 0.999974727630615 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM121 ENSG00000184986 CDS Human protein_coding chr14:105995409 chr14:105995411 synonymous SNV . 0 23 hPsi_associated_SNPs_911 0 0 1 0 0 exosome 1 0.438743535883003 5.05447387699753e-05 1 hPsi_site_7536 iPseU_CNN:5.05447387699753e-05;iRNA_PseU:1 7537 chr10 126655286 126655286 1 + A G HNSC 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTG < 41bp 1 0.299722953532511 1 0.996634542942047 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655286 nonsynonymous SNV 0.996 3 41 hPsi_associated_SNPs_912 0 0 1 0 1 Ribosome 1 0.461467642651767 0.00673091411590598 1 hPsi_site_7537 iPseU_CNN:0.00673091411590598;iRNA_PseU:1 7538 chr1 40525772 40525772 1 + C T HNSC 40525765 + 40525745 40525785 41 CAGCTCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGT CAGCTCCATATGTGCAGGCATTTGACTTGCTGCTTGCTGGT < 41bp 1 0.369482132772025 1 0.990262985229492 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525765 chr1:40525772 nonsynonymous SNV 0.949 0 28 hPsi_associated_SNPs_913 0 0 1 1 3 Ribosome 1 0.456199889765138 0.0194740295410161 1 hPsi_site_7538 iPseU_CNN:0.0194740295410161;iRNA_PseU:1 7539 chr22 24967993 24967993 1 + G C HNSC 24967978 + 24967958 24967998 41 AACAGAACTTTGTCCTTTTTTCTTTCAGGTTATCTGAGTTC AACAGAACTTTGTCCTTTTTTCTTTCAGGTTATCTCAGTTC < 41bp 1 0.675515323828938 1 0.99929004907608 experiment 0.648969352342124 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SNRPD3 ENSG00000100028 CDS Human protein_coding chr22:24967978 chr22:24967993 stoploss . 0 36 hPsi_associated_SNPs_914 0 0 1 2 2 Ribosome 1 0.420946410947206 0.00141990184784002 1 hPsi_site_7539 iPseU_CNN:0.00141990184784002;iRNA_PseU:1 7540 chr2 32689676 32689676 1 + G A HNSC 32689666 + 32689646 32689686 41 CCTGTTCACAACTCTGTGCCTTCCAACCCAGTGGCTGCCCC CCTGTTCACAACTCTGTGCCTTCCAACCCAATGGCTGCCCC < 41bp 1 0.55905584122486 1 0.984366416931152 experiment 0.881888317550281 Functional Loss NA| BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32689666 chr2:32689676 nonsynonymous SNV 1.000 1 31 hPsi_associated_SNPs_915 0 0 1 0 1 Nucleus 1 0.848175595687719 0.031267166137696 0.303648808624561 hPsi_site_7540 iPseU_CNN:0.031267166137696;iRNA_PseU:0.303648808624561 7541 chr11 61105464 61105464 1 + G A HNSC 61105451 + 61105431 61105471 41 AACTCGGTGGCTGGCTGTGCTGATGACGCTCTTGCTGGCCT AACTCGGTGGCTGGCTGTGCTGATGACGCTCTTACTGGCCT < 41bp 1 0.224794337686485 1 0.940849900245667 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61105451 chr11:61105464 nonsynonymous SNV 0.995 0 34 hPsi_associated_SNPs_916 0 0 1 0 0 Cytosol 1 0.604297301159494 0.118300199508666 0.791405397681011 hPsi_site_7541 iPseU_CNN:0.118300199508666;iRNA_PseU:0.791405397681011 7542 chr9 131339447 131339447 1 + G A HNSC 131339434 + 131339414 131339454 41 GGATGAGACTATCAGTTGGATTAAGGAAAAGGAGCAGTTAA GGATGAGACTATCAGTTGGATTAAGGAAAAGGAACAGTTAA < 41bp 1 0.44543965324841 1 0.997845947742462 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131339434 chr9:131339447 synonymous SNV . 0 34 hPsi_associated_SNPs_917 0 0 1 0 1 Nucleus 1 0.70852319736746 0.00430810451507591 0.58295360526508 hPsi_site_7542 iPseU_CNN:0.00430810451507591;iRNA_PseU:0.58295360526508 7543 chr5 139918959 139918959 1 + T C HNSC 139918972 + 139918952 139918992 41 TGGCACGTGGGCACCTCATATTGGAAACATGCATCTCAAAT TGGCACGCGGGCACCTCATATTGGAAACATGCATCTCAAAT < 41bp 1 0.184928854159764 1 0.999842047691345 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ANKHD1 ENSG00000131503 CDS Human protein_coding chr5:139918972 chr5:139918959 nonsynonymous SNV 1.000 3 8 hPsi_associated_SNPs_918 0 0 1 0 1 Ribosome 1 0.780843706472396 0.000315904617310014 0.438312587055209 hPsi_site_7543 iPseU_CNN:0.000315904617310014;iRNA_PseU:0.438312587055209 7544 chr14 77929012 77929012 1 + C T HNSC 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGTCTGACAC < 41bp 1 0.106414651407711 1 0.992781281471252 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929012 nonsynonymous SNV 1.000 3 34 hPsi_associated_SNPs_919 0 0 1 0 2 Ribosome 1 0.555773028351465 0.014437437057496 0.88845394329707 hPsi_site_7544 iPseU_CNN:0.014437437057496;iRNA_PseU:0.88845394329707 7545 chr1 28176681 28176681 1 + C T HNSC 28176670 + 28176650 28176690 41 GGAGCAGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTC GGAGCAGGCGCATGCAGAACTTTGCCTTCAGTGGAGGACTC < 41bp 1 0.59877228021618 1 0.981961131095886 experiment 0.80245543956764 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176670 chr1:28176681 synonymous SNV . 0 32 hPsi_associated_SNPs_920 0 0 1 0 1 Ribosome 1 0.485087597116073 0.036077737808228 1 hPsi_site_7545 iPseU_CNN:0.036077737808228;iRNA_PseU:1 Leigh syndrome Leigh syndrome 7546 chr10 93602105 93602105 1 + C T HNSC 93602098 + 93602078 93602118 41 GTTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG GTTGTCTTCTCCTGATAATGTAAATTGTCGCGATACCCAAG < 41bp 1 0.560516200993004 1 0.6042320728302 experiment 0.878967598013992 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93602098 chr10:93602105 synonymous SNV . 0 28 hPsi_associated_SNPs_921 0 0 1 0 1 Ribosome 1 0.438792311288564 0.7915358543396 1 hPsi_site_7546 iPseU_CNN:0.7915358543396;iRNA_PseU:1 7547 chr11 65270397 65270397 1 + G T HNSC 65270392 + 65270372 65270412 41 ATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAG ATAACCACAAAAATAATGAATTGATTAGAAATACAATGAAG < 41bp 1 0.406273074740094 1 0.994178295135498 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|25192136;GSE58200;Pseudo-seq;Hela;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270392 chr11:65270397 . . 0 26 hPsi_associated_SNPs_922 0 0 1 0 0 unknown 1 0.440000402754021 0.0116434097290039 1 hPsi_site_7547 iPseU_CNN:0.0116434097290039;iRNA_PseU:1 7548 chr5 10400928 10400928 1 + C T HNSC 10400938 + 10400918 10400958 41 TCATTTCTCCCTTGTTGGTTTGGGATTTGAAGAACACGTGA TCATTTCTCCTTTGTTGGTTTGGGATTTGAAGAACACGTGA < 41bp 1 0.237246190199116 1 0.866748452186584 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10400938 chr5:10400928 nonsynonymous SNV 1.000 2 11 hPsi_associated_SNPs_923 0 0 1 0 2 Nucleus 1 0.711626810302271 0.266503095626832 0.576746379395458 hPsi_site_7548 iPseU_CNN:0.266503095626832;iRNA_PseU:0.576746379395458 7549 chr11 65270407 65270407 1 + A G HNSC 65270392 + 65270372 65270412 41 ATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAG ATAACCACAAAAATAATGAATTGATGAGAAATACAGTGAAG < 41bp 1 0.529139627893748 1 0.958489060401917 experiment 0.941720744212505 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|25192136;GSE58200;Pseudo-seq;Hela;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270392 chr11:65270407 . . 0 36 hPsi_associated_SNPs_924 0 0 1 0 0 unknown 1 0.989513356193658 0.0830218791961661 0.0209732876126842 hPsi_site_7549 iPseU_CNN:0.0830218791961661;iRNA_PseU:0.0209732876126842 7550 chr17 16342356 16342356 1 + C G HNSC 16342354 + 16342334 16342374 41 CGCACATAAGGTGTGACCTTTTCATTCCCGTTGTTATGGAG CGCACATAAGGTGTGACCTTTTGATTCCCGTTGTTATGGAG < 41bp 1 0.685308286653748 1 0.903917908668518 experiment 0.629383426692505 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342354 chr17:16342356 . . 0 23 hPsi_associated_SNPs_925 0 0 1 0 1 Nucleus 1 0.437116977097892 0.192164182662964 1 hPsi_site_7550 iPseU_CNN:0.192164182662964;iRNA_PseU:1 7551 chr11 64973960 64973960 1 + G C HNSC 64973953 + 64973933 64973973 41 GCTGGTGGGCCAGCCGGCCGTACACTTGAAGCGTGACTTCT GCTGGTGGGCCAGCCGGCCGTACACTTCAAGCGTGACTTCT < 41bp 1 0.469560223365343 1 0.999999940395355 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64973953 chr11:64973960 nonsynonymous SNV 0.788 5 28 hPsi_associated_SNPs_926 0 0 1 0 1 Ribosome 1 0.438914568717186 1.1920928999487e-07 1 hPsi_site_7551 iPseU_CNN:1.1920928999487e-07;iRNA_PseU:1 7552 chr17 29162420 29162420 1 + G A HNSC 29162404 + 29162384 29162424 41 CTTAATGAAAAATGTCTATATGAAGTAGGAAGAGATGATAA CTTAATGAAAAATGTCTATATGAAGTAGGAAGAGATAATAA < 41bp 1 0.0399916696303854 1 0.6598100066185 experiment 1 Functional Loss NA| ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29162404 chr17:29162420 nonsynonymous SNV 0.575 0 37 hPsi_associated_SNPs_927 0 0 1 0 0 chromatin 1 0.4497132141484 0.680379986763 1 hPsi_site_7552 iPseU_CNN:0.680379986763;iRNA_PseU:1 7553 chr14 39597527 39597527 1 + G A HNSC 39597508 + 39597488 39597528 41 CAGTAACTAGTGTCTTGGAATATCTGAGTAATTGGTTTGGA CAGTAACTAGTGTCTTGGAATATCTGAGTAATTGGTTTGAA < 41bp 1 0.143460763666314 1 0.9999840259552 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39597508 chr14:39597527 nonsynonymous SNV 1.000 0 40 hPsi_associated_SNPs_928 0 0 0 0 2 Ribosome 1 0.438718616216659 3.19480896000535e-05 1 hPsi_site_7553 iPseU_CNN:3.19480896000535e-05;iRNA_PseU:1 7554 chr7 142962252 142962252 1 + G A HNSC 142962241 + 142962221 142962261 41 CTTGGATGACTTTCTGACCTTCCCCAGGCACGTTTTCAGGG CTTGGATGACTTTCTGACCTTCCCCAGGCACATTTTCAGGG < 41bp 1 0.0408610860325853 1 0.92345803976059 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962241 chr7:142962252 nonsynonymous SNV 0.000 0 32 hPsi_associated_SNPs_929 0 0 1 0 1 Endoplasmic reticulum 1 0.712118311985337 0.15308392047882 0.575763376029325 hPsi_site_7554 iPseU_CNN:0.15308392047882;iRNA_PseU:0.575763376029325 7555 chr19 45494630 45494630 1 + C T HNSC 45494610 + 45494590 45494630 41 CCTGGGTGCTCAGCATGCTCTACGGCTTCCTGCTGACCTTC CCTGGGTGCTCAGCATGCTCTACGGCTTCCTGCTGACCTTT < 41bp 1 0.16964270637742 1 0.969697594642639 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45494610 chr19:45494630 synonymous SNV . 0 41 hPsi_associated_SNPs_930 0 0 0 0 1 Cytosol 1 0.438665748702339 0.0606048107147219 1 hPsi_site_7555 iPseU_CNN:0.0606048107147219;iRNA_PseU:1 7556 chr17 34848722 34848722 1 + G A HNSC 34848708 + 34848688 34848728 41 GAAAAAAATAAGATCAGCTCTTCCTACCAAAACCGTAAAGC GAAAAAAATAAGATCAGCTCTTCCTACCAAAACCATAAAGC < 41bp 1 0.132966629049687 1 0.209198623895645 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNHIT3 ENSG00000108278 CDS Human other chr17:34848708 chr17:34848722 nonsynonymous SNV 0.000 0 35 hPsi_associated_SNPs_931 0 0 1 0 2 Cytosol 1 0.497324412108098 1 1 hPsi_site_7556 iPseU_CNN:1;iRNA_PseU:1 7557 chrX 128692624 128692624 1 + G C HNSC 128692622 + 128692602 128692642 41 TCTTTCAGGGCTTCTTGGATTTGAAGACAATTTTTCTTCTA TCTTTCAGGGCTTCTTGGATTTCAAGACAATTTTTCTTCTA < 41bp 1 0.433226581130237 1 0.999988555908203 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock OCRL ENSG00000122126 CDS Human protein_coding chrX:128692622 chrX:128692624 nonsynonymous SNV 0.997 4 23 hPsi_associated_SNPs_932 0 0 1 0 1 Cytosol 1 0.438718594076861 2.2888183593972e-05 1 hPsi_site_7557 iPseU_CNN:2.2888183593972e-05;iRNA_PseU:1 7558 chr8 22262337 22262337 1 + C G HNSC 22262334 + 22262314 22262354 41 TCATCCCTGGGTGCACCAGCTATCAGCGCTGCCTCCTTCCT TCATCCCTGGGTGCACCAGCTATGAGCGCTGCCTCCTTCCT < 41bp 1 0.479594635404254 1 0.999988317489624 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22262334 chr8:22262337 nonsynonymous SNV 0.019 0 24 hPsi_associated_SNPs_933 0 0 1 0 0 Endoplasmic reticulum 1 0.439323243020937 2.33650207519531e-05 1 hPsi_site_7558 iPseU_CNN:2.33650207519531e-05;iRNA_PseU:1 7559 chr4 54257190 54257190 1 + G A HNSC 54257193 + 54257173 54257213 41 TAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAAT TAGGTGCTGATCTTTCTAATTATTTTAATTATGGGTTTAAT < 41bp 1 0.210639721508352 1 0.984512448310852 experiment 1 Functional Loss NA| FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257193 chr4:54257190 nonsynonymous SNV 1.000 5 18 hPsi_associated_SNPs_934 0 0 1 0 1 Nucleus 1 0.449940710320576 0.0309751033782959 1 hPsi_site_7559 iPseU_CNN:0.0309751033782959;iRNA_PseU:1 7560 chr14 74040259 74040259 1 + G A HNSC 74040253 + 74040233 74040273 41 TGGAGACGCTCCATCTGGAGTACTTTGAAGAAGCCATGAAC TGGAGACGCTCCATCTGGAGTACTTTAAAGAAGCCATGAAC < 41bp 1 0.143003313519161 1 0.989962816238403 experiment 1 Functional Loss NA| ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74040253 chr14:74040259 nonsynonymous SNV 0.993 3 27 hPsi_associated_SNPs_935 0 0 1 0 1 exosome 1 0.438847256321526 0.020074367523194 1 hPsi_site_7560 iPseU_CNN:0.020074367523194;iRNA_PseU:1 7561 chr17 40925508 40925508 1 + C T HNSC 40925490 + 40925470 40925510 41 TTCCGGGTTTCCTGGGCTACTACGATGGCGATGAGTTTCGA TTCCGGGTTTCCTGGGCTACTACGATGGCGATGAGTTTTGA < 41bp 1 0.13190234895939 1 0.896587550640106 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide VPS25 ENSG00000131475 CDS Human protein_coding chr17:40925490 chr17:40925508 synonymous SNV . 0 39 hPsi_associated_SNPs_936 0 0 1 0 1 Ribosome 1 0.439538734864518 0.206824898719788 1 hPsi_site_7561 iPseU_CNN:0.206824898719788;iRNA_PseU:1 7562 chr10 75877857 75877857 1 + C T HNSC 75877869 + 75877849 75877889 41 TGAAGCTGCTTCAATCAAAATTCGAACAGATGCTGGATTTA TGAAGCTGTTTCAATCAAAATTCGAACAGATGCTGGATTTA < 41bp 1 0.180810258421983 1 0.999004483222961 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75877869 chr10:75877857 nonsynonymous SNV 1.000 4 9 hPsi_associated_SNPs_937 0 0 1 0 1 Nucleus 1 0.580100699344355 0.00199103355407804 0.83979860131129 hPsi_site_7562 iPseU_CNN:0.00199103355407804;iRNA_PseU:0.83979860131129 7563 chr16 69969816 69969816 1 + C T HNSC 69969800 + 69969780 69969820 41 GACACGGGCTTCACCCTCCCTTTCTACAAGCGGATGCTCAA GACACGGGCTTCACCCTCCCTTTCTACAAGCGGATGTTCAA < 41bp 1 0.11159465762991 1 0.997318983078003 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WWP2 ENSG00000198373 CDS Human protein_coding chr16:69969800 chr16:69969816 nonsynonymous SNV 1.000 4 37 hPsi_associated_SNPs_938 0 0 1 0 2 Ribosome 1 0.534230270861084 0.00536203384399392 0.931539458277831 hPsi_site_7563 iPseU_CNN:0.00536203384399392;iRNA_PseU:0.931539458277831 7564 chr12 7046450 7046450 1 + C G HNSC 7046447 + 7046427 7046467 41 GAACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCT GAACGGGGACCCCACCGGGCTATGGAGGAACCTCGCCACCT < 41bp 1 0.447441435182677 1 0.999956429004669 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATN1 ENSG00000111676 CDS Human protein_coding chr12:7046447 chr12:7046450 nonsynonymous SNV 0.057 2 24 hPsi_associated_SNPs_939 0 0 1 0 0 Endoplasmic reticulum 1 0.43914699830048 8.71419906620652e-05 1 hPsi_site_7564 iPseU_CNN:8.71419906620652e-05;iRNA_PseU:1 7565 chr2 27446491 27446491 1 + G C HNSC 27446486 + 27446466 27446506 41 TGGTGGGCTCTGGGCGCTGCTTTCTGACATCCCAGAACCAT TGGTGGGCTCTGGGCGCTGCTTTCTCACATCCCAGAACCAT < 41bp 1 0.385267280930875 1 0.643070757389069 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27446486 chr2:27446491 synonymous SNV . 0 26 hPsi_associated_SNPs_940 0 0 0 0 1 Exosome 1 0.438709609799328 0.713858485221862 1 hPsi_site_7565 iPseU_CNN:0.713858485221862;iRNA_PseU:1 7566 chr5 170818333 170818333 1 + G A HNSC 170818349 + 170818329 170818369 41 AAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATT AAAGAATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATT < 41bp 1 0.197580070298528 1 0.99671471118927 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NPM1 ENSG00000181163 CDS Human protein_coding chr5:170818349 chr5:170818333 nonsynonymous SNV 0.988 3 5 hPsi_associated_SNPs_942 0 0 1 0 2 Ribosome 1 0.44058681972374 0.00657057762145996 1 hPsi_site_7566 iPseU_CNN:0.00657057762145996;iRNA_PseU:1 7567 chr2 211532931 211532931 1 + A T HNSC 211532930 + 211532910 211532950 41 GTGGCTTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA GTGGCTTGCTTTGGTGAAGGTTTTCATACAGCCTTCCTAAA < 41bp 1 0.423049400820547 1 0.931044816970825 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211532930 chr2:211532931 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_943 0 0 1 0 2 Nucleus 1 0.438718592995105 0.13791036605835 1 hPsi_site_7567 iPseU_CNN:0.13791036605835;iRNA_PseU:1 7568 chr7 92905556 92905556 1 + A T HNSC 92905541 + 92905521 92905561 41 CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGTACTAT < 41bp 1 0.174973578929445 1 0.964145600795746 experiment 1 Functional Loss NA| VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905541 chr7:92905556 nonsynonymous SNV 0.999 4 36 hPsi_associated_SNPs_944 0 0 1 0 2 Cytosol 1 0.99999045811429 0.0717087984085081 1.90837714191261e-05 hPsi_site_7568 iPseU_CNN:0.0717087984085081;iRNA_PseU:1.90837714191261e-05 7569 chr10 104122290 104122290 1 + T C HNSC 104122275 + 104122255 104122295 41 ACTCTATACAACACACCTACTATCTCTTGATGCCCTATTGA ACTCTATACAACACACCTACTATCTCTTGATGCCCCATTGA < 41bp 1 0.152209654085509 1 0.999955475330353 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104122275 chr10:104122290 nonsynonymous SNV 0.958 4 36 hPsi_associated_SNPs_945 0 0 1 0 1 Nucleus 1 0.670669834579847 8.90493392939895e-05 0.658660330840306 hPsi_site_7569 iPseU_CNN:8.90493392939895e-05;iRNA_PseU:0.658660330840306 7570 chr1 227169739 227169739 1 + G A HNSC 227169748 + 227169728 227169768 41 GGAAGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAG GGAAGAAGGCCATGCTGGGTTCCAGTCCTTTCCTGTCCGAG < 41bp 1 0.452746064049392 1 0.999082565307617 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control COQ8A ENSG00000163050 CDS Human protein_coding chr1:227169748 chr1:227169739 nonsynonymous SNV 0.457 1 12 hPsi_associated_SNPs_946 0 0 1 0 1 Nucleus 1 0.438713956099032 0.00183486938476607 1 hPsi_site_7570 iPseU_CNN:0.00183486938476607;iRNA_PseU:1 7571 chr2 60998716 60998716 1 + C T HNSC 60998701 + 60998681 60998721 41 ATACAAACCATATCAGATAATTTAGATCTAAGAGACGACTC ATACAAACCATATCAGATAATTTAGATCTAAGAGATGACTC < 41bp 1 0.181868343203646 1 0.927415013313293 experiment 1 Functional Loss NA| PAPOLG ENSG00000115421 CDS Human protein_coding chr2:60998701 chr2:60998716 synonymous SNV . 0 36 hPsi_associated_SNPs_947 0 0 1 0 2 chromatin 1 0.443861299859919 0.145169973373414 1 hPsi_site_7571 iPseU_CNN:0.145169973373414;iRNA_PseU:1 7572 chr8 144358699 144358699 1 + C T HNSC 144358681 + 144358661 144358701 41 GCCAGGCCTTCAGCCAGAGCTCCAACCTGGTGCGCCACCAG GCCAGGCCTTCAGCCAGAGCTCCAACCTGGTGCGCCACTAG < 41bp 1 0.454950500646385 1 0.995707869529724 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLI4 ENSG00000250571 CDS Human protein_coding chr8:144358681 chr8:144358699 stopgain 0.999 0 39 hPsi_associated_SNPs_951 0 0 0 0 0 chromatin 1 0.438636293833591 0.00858426094055198 1 hPsi_site_7572 iPseU_CNN:0.00858426094055198;iRNA_PseU:1 7573 chr10 95660720 95660720 1 + G A KICH 95660707 + 95660687 95660727 41 GAAAAATATAGCCCTTGGGATGCTCTTTTCACCGTGTTCAC GAAAAATATAGCCCTTGGGATGCTCTTTTCACCATGTTCAC < 41bp 1 0.205283588690702 1 0.904146671295166 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660707 chr10:95660720 nonsynonymous SNV 0.811 0 34 hPsi_associated_SNPs_952 0 0 1 0 0 exosome 1 0.789510149681208 0.191706657409668 0.420979700637584 hPsi_site_7573 iPseU_CNN:0.191706657409668;iRNA_PseU:0.420979700637584 7574 chr10 72299403 72299403 1 + A G KICH 72299409 + 72299389 72299429 41 GGGCCCCCTGACCTACAGGTTCCAGACCTGCCTTACCATGC GGGCCCCCTGACCTGCAGGTTCCAGACCTGCCTTACCATGC < 41bp 1 0.487835072608672 1 0.999602556228638 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PALD1 ENSG00000107719 CDS Human protein_coding chr10:72299409 chr10:72299403 nonsynonymous SNV 0.017 0 15 hPsi_associated_SNPs_953 0 0 1 0 0 Ribosome 1 0.459870971574183 0.000794887542723943 1 hPsi_site_7574 iPseU_CNN:0.000794887542723943;iRNA_PseU:1 7575 chr4 129128464 129128464 1 + A G KIRC 129128454 + 129128434 129128474 41 TTTTGGGCTTATTTGAAATATTCTCAATCTAAGACACAGTC TTTTGGGCTTATTTGAAATATTCTCAATCTGAGACACAGTC < 41bp 1 0.436172916748676 1 0.998647689819336 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LARP1B ENSG00000138709 CDS Human protein_coding chr4:129128454 chr4:129128464 nonsynonymous SNV 0.617 3 31 hPsi_associated_SNPs_954 0 0 0 2 2 Nucleus 1 0.521747938103675 0.0027046203613279 0.956504123792649 hPsi_site_7575 iPseU_CNN:0.0027046203613279;iRNA_PseU:0.956504123792649 7576 chr2 170806129 170806129 1 + T C KIRC 170806136 + 170806116 170806156 41 ATTCTGGTACAGCTCAAGTTTTCAGTTTAGTAGCAGAACGT ATTCTGGTACAGCCCAAGTTTTCAGTTTAGTAGCAGAACGT < 41bp 1 0.243307590197197 1 0.945413827896118 experiment 1 Functional Loss NA| UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806136 chr2:170806129 synonymous SNV . 0 14 hPsi_associated_SNPs_955 0 0 1 0 0 Cytosol 1 0.434297591515576 0.109172344207764 1 hPsi_site_7576 iPseU_CNN:0.109172344207764;iRNA_PseU:1 7577 chr2 170806130 170806130 1 + C T KIRC 170806136 + 170806116 170806156 41 ATTCTGGTACAGCTCAAGTTTTCAGTTTAGTAGCAGAACGT ATTCTGGTACAGCTTAAGTTTTCAGTTTAGTAGCAGAACGT < 41bp 1 0.468001404788998 1 0.997663140296936 experiment 1 Functional Loss NA| UBR3 ENSG00000144357 CDS Human protein_coding chr2:170806136 chr2:170806130 stopgain 1.000 0 15 hPsi_associated_SNPs_956 0 0 1 0 0 Cytosol 1 0.451660649755205 0.00467371940612793 1 hPsi_site_7577 iPseU_CNN:0.00467371940612793;iRNA_PseU:1 7578 chr6 36177586 36177586 1 + T C KIRC 36177606 + 36177586 36177626 41 TGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGACA CGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGACA < 41bp 1 0.438927508749207 1 0.996961116790771 experiment 1 Functional Loss NA| BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36177606 chr6:36177586 nonsynonymous SNV 1.000 1 1 hPsi_associated_SNPs_957 0 0 1 1 1 chromatin 1 0.718197519823764 0.00607776641845792 0.563604960352472 hPsi_site_7578 iPseU_CNN:0.00607776641845792;iRNA_PseU:0.563604960352472 7579 chr17 41345527 41345527 1 + C A KIRC 41345535 + 41345515 41345555 41 TCTCACAAAGGCCAGCAATTTGGGCCTCGGGTCTGGTGCAG TCTCACAAAGGCAAGCAATTTGGGCCTCGGGTCTGGTGCAG < 41bp 1 0.199230322291093 1 0.941725850105286 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345535 chr17:41345527 nonsynonymous SNV 1.000 1 13 hPsi_associated_SNPs_958 0 0 1 0 0 Cytosol 1 0.456843114899486 0.116548299789428 1 hPsi_site_7579 iPseU_CNN:0.116548299789428;iRNA_PseU:1 7580 chr9 132636883 132636883 1 + G T KIRC 132636880 + 132636860 132636900 41 GTGCATTCACCTAAAGCGCTTTCGGCACGAGGTGATGTACT GTGCATTCACCTAAAGCGCTTTCTGCACGAGGTGATGTACT < 41bp 1 0.0719682903524913 1 0.943100988864899 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132636880 chr9:132636883 nonsynonymous SNV 0.939 2 24 hPsi_associated_SNPs_959 0 0 0 0 1 chromatin 1 0.434547091918149 0.113798022270202 1 hPsi_site_7580 iPseU_CNN:0.113798022270202;iRNA_PseU:1 7581 chr5 70945080 70945080 1 + G A KIRC 70945064 + 70945044 70945084 41 GAGCCGGAAACTATGGGATGTGTGGCAGAGCATATAGGTAG GAGCCGGAAACTATGGGATGTGTGGCAGAGCATATAAGTAG < 41bp 1 0.179748544408316 1 0.998605310916901 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70945064 chr5:70945080 nonsynonymous SNV 0.339 2 37 hPsi_associated_SNPs_960 0 0 1 1 1 Ribosome 1 0.865195182775841 0.00278937816619806 0.269609634448317 hPsi_site_7581 iPseU_CNN:0.00278937816619806;iRNA_PseU:0.269609634448317 7582 chr19 13051666 13051666 1 + G T KIRC 13051657 + 13051637 13051677 41 ATTCTCCCGATCCCAGTATCTATGCCTATGATAACTTTGGC ATTCTCCCGATCCCAGTATCTATGCCTATTATAACTTTGGC < 41bp 1 0.250974298561421 1 0.997483372688293 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051657 chr19:13051666 nonsynonymous SNV 0.025 2 30 hPsi_associated_SNPs_961 0 0 1 0 1 Ribosome 1 0.438719101616471 0.00503325462341397 1 hPsi_site_7582 iPseU_CNN:0.00503325462341397;iRNA_PseU:1 7583 chr14 77929008 77929008 1 + T C KIRC 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGCCAAAGACGAGCCTGACAC < 41bp 1 0.248381770797157 1 0.998848974704742 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929008 synonymous SNV . 0 30 hPsi_associated_SNPs_962 0 0 1 0 2 Ribosome 1 0.518630478692832 0.00230205059051602 0.962739042614335 hPsi_site_7583 iPseU_CNN:0.00230205059051602;iRNA_PseU:0.962739042614335 7584 chr1 226027665 226027665 1 + G A KIRC 226027678 + 226027658 226027698 41 CCGTCAAGGAGAAGGTATTCTACAGCCTGATGAGGGAGAGC CCGTCAAAGAGAAGGTATTCTACAGCCTGATGAGGGAGAGC < 41bp 1 0.194652292511894 1 0.987137734889984 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027678 chr1:226027665 synonymous SNV . 0 8 hPsi_associated_SNPs_963 0 0 1 0 1 Endoplasmic reticulum 1 0.638939168580467 0.025724530220032 0.722121662839065 hPsi_site_7584 iPseU_CNN:0.025724530220032;iRNA_PseU:0.722121662839065 7585 chr22 29695794 29695794 1 + G A KIRC 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGGCCCCCTGGACCTTTGATGGAACAAATGGGAGG < 41bp 1 0.138011026276144 1 0.999938905239105 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695794 synonymous SNV . 0 33 hPsi_associated_SNPs_964 0 0 1 0 1 Cytosol 1 0.829470025911142 0.000122189521789995 0.341059948177717 hPsi_site_7585 iPseU_CNN:0.000122189521789995;iRNA_PseU:0.341059948177717 7586 chr2 27276801 27276801 1 + G T KIRP 27276786 + 27276766 27276806 41 GACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCGTTTCG GACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCTTTTCG < 41bp 1 0.386165112680017 1 0.999998450279236 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27276786 chr2:27276801 nonsynonymous SNV 1.000 4 36 hPsi_associated_SNPs_965 0 0 1 1 1 Cytosol 1 0.436047546557572 3.09944152809827e-06 1 hPsi_site_7586 iPseU_CNN:3.09944152809827e-06;iRNA_PseU:1 7587 chr1 107599742 107599742 1 + C T KIRP 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACGTTCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG < 41bp 1 0.046862797597539 1 0.996549725532532 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599742 synonymous SNV . 0 7 hPsi_associated_SNPs_966 0 0 1 0 0 Ribosome 1 0.44515152315162 0.00690054893493608 1 hPsi_site_7587 iPseU_CNN:0.00690054893493608;iRNA_PseU:1 7588 chr22 39066951 39066951 1 + G A KIRP 39066942 + 39066922 39066962 41 TTGGAATACGGATCCCCGACTATGAACCTGGCAGGGCAAAG TTGGAATACGGATCCCCGACTATGAACCTAGCAGGGCAAAG < 41bp 1 0.135703841517224 1 0.999109983444214 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CBY1 ENSG00000100211 CDS Human protein_coding chr22:39066942 chr22:39066951 synonymous SNV . 0 30 hPsi_associated_SNPs_967 0 0 1 0 2 Ribosome 1 0.438715513723815 0.00178003311157204 1 hPsi_site_7588 iPseU_CNN:0.00178003311157204;iRNA_PseU:1 7589 chr7 104750955 104750955 1 + G T KIRP 104750961 + 104750941 104750981 41 GTCTCATGTTCACCGAGTCATGTTCAGTCTTCACCTTCATC GTCTCATGTTCACCTAGTCATGTTCAGTCTTCACCTTCATC < 41bp 1 0.0332902284945939 1 0.989396035671234 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock KMT2E ENSG00000005483 CDS Human protein_coding chr7:104750961 chr7:104750955 synonymous SNV . 0 15 hPsi_associated_SNPs_968 0 0 1 0 2 Cytosol 1 0.438708115857584 0.021207928657532 1 hPsi_site_7589 iPseU_CNN:0.021207928657532;iRNA_PseU:1 7590 chr19 9271676 9271676 1 + G A KIRP 9271696 + 9271676 9271716 41 GGAAAGCTTTCAGCGCGAGTTCAAACCTCACCGCACACAGG AGAAAGCTTTCAGCGCGAGTTCAAACCTCACCGCACACAGG < 41bp 1 0.257069781323988 1 0.907388865947723 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271696 chr19:9271676 nonsynonymous SNV 0.909 4 1 hPsi_associated_SNPs_969 0 0 1 0 0 Nucleus 1 0.438720094109201 0.185222268104554 1 hPsi_site_7590 iPseU_CNN:0.185222268104554;iRNA_PseU:1 7591 chr5 82836395 82836395 1 + A T KIRP 82836401 + 82836381 82836421 41 TCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAA TCCAAGACCGTTTCTGGGAATTCGAGGATTCCACCTTAAAA < 41bp 1 0.149618614318651 1 0.999377131462097 experiment 1 Functional Loss NA| VCAN ENSG00000038427 CDS Human protein_coding chr5:82836401 chr5:82836395 nonsynonymous SNV 0.003 0 15 hPsi_associated_SNPs_970 0 0 1 0 0 Ribosome 1 0.734654691761776 0.00124573707580611 0.530690616476448 hPsi_site_7591 iPseU_CNN:0.00124573707580611;iRNA_PseU:0.530690616476448 7592 chr1 116941400 116941400 1 + G C KIRP 116941381 + 116941361 116941401 41 TGATTCTTCTGGATGACAACTTTGCCTCAATTGTGACTGGA TGATTCTTCTGGATGACAACTTTGCCTCAATTGTGACTGCA < 41bp 1 0.186753974610145 1 0.997207164764404 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116941381 chr1:116941400 nonsynonymous SNV 1.000 5 40 hPsi_associated_SNPs_971 0 0 1 0 1 Nucleus 1 0.594920927960265 0.00558567047119207 0.810158144079469 hPsi_site_7592 iPseU_CNN:0.00558567047119207;iRNA_PseU:0.810158144079469 7593 chr6 17507928 17507928 1 + T C KIRP 17507922 + 17507902 17507942 41 ATGAATGACGCTGCCACCTTTTACACTAACAGGGTCTTAAA ATGAATGACGCTGCCACCTTTTACACCAACAGGGTCTTAAA < 41bp 1 0.645203595106133 1 0.999394237995148 experiment 0.709592809787735 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAP2 ENSG00000112186 CDS Human protein_coding chr6:17507922 chr6:17507928 synonymous SNV . 0 27 hPsi_associated_SNPs_972 0 0 1 3 2 exosome 1 0.438719651536642 0.00121152400970392 1 hPsi_site_7593 iPseU_CNN:0.00121152400970392;iRNA_PseU:1 7594 chr6 31937328 31937328 1 + G A KIRP 31937314 + 31937294 31937334 41 CTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCC CTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTAAGGGCC < 41bp 1 0.330177247685533 1 0.950199484825134 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31937314 chr6:31937328 nonsynonymous SNV 0.904 4 35 hPsi_associated_SNPs_973 0 0 1 0 1 chromatin 1 0.441752944050494 0.0996010303497319 1 hPsi_site_7594 iPseU_CNN:0.0996010303497319;iRNA_PseU:1 7595 chr1 10177626 10177626 1 + C A KIRP 10177621 + 10177601 10177641 41 GAACTACCTCATCGAGTGTTTCGACCGAGTTGGAATAGAGG GAACTACCTCATCGAGTGTTTCGACAGAGTTGGAATAGAGG < 41bp 1 0.0532166094414087 1 0.00477713346481323 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UBE4B ENSG00000130939 CDS Human protein_coding chr1:10177621 chr1:10177626 synonymous SNV . 0 26 hPsi_associated_SNPs_974 0 0 1 0 1 Cytosol 1 0.438717478398306 1 1 hPsi_site_7595 iPseU_CNN:1;iRNA_PseU:1 7596 chr3 152553966 152553966 1 + A G KIRP 152553956 + 152553936 152553976 41 CCATGTGTAAACTGCAGAGGTTCATCTTTCATGTGAACCTC CCATGTGTAAACTGCAGAGGTTCATCTTTCGTGTGAACCTC < 41bp 1 0.30139152315399 1 0.97770482301712 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553956 chr3:152553966 nonsynonymous SNV 0.995 4 31 hPsi_associated_SNPs_975 0 0 1 0 0 Endoplasmic reticulum 1 0.438973592112611 0.0445903539657599 1 hPsi_site_7596 iPseU_CNN:0.0445903539657599;iRNA_PseU:1 7597 chr6 32945266 32945266 1 + T C KIRP 32945258 + 32945238 32945278 41 ATTACCGGGATGCACAGGAGTTTGCTGCTGATGTACGGCTT ATTACCGGGATGCACAGGAGTTTGCTGCCGATGTACGGCTT < 41bp 1 0.295254559536861 1 0.960448443889618 experiment 1 Functional Loss NA| BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945258 chr6:32945266 synonymous SNV . 0 29 hPsi_associated_SNPs_976 0 0 1 6 2 Cytosol 1 0.438712165855452 0.0791031122207639 1 hPsi_site_7597 iPseU_CNN:0.0791031122207639;iRNA_PseU:1 7598 chr1 36752690 36752690 1 + C G LGG 36752689 + 36752669 36752709 41 ACATCCCAGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA ACATCCCAGATGGGCTCAACTGTGCCGAGTGGTGCCGGGTA < 41bp 1 0.0676667968099002 1 0.957614421844482 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752689 chr1:36752690 nonsynonymous SNV 0.037 0 22 hPsi_associated_SNPs_977 0 0 1 0 0 Nucleus 1 0.43873100687037 0.084771156311036 1 hPsi_site_7598 iPseU_CNN:0.084771156311036;iRNA_PseU:1 7599 chr22 38271891 38271891 1 + A G LGG 38271897 + 38271877 38271917 41 GGTCACCACATACTATTATGTTGGGTTTGCATATTTGATGA GGTCACCACATACTGTTATGTTGGGTTTGCATATTTGATGA < 41bp 1 0.148502498794919 1 0.146613508462906 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38271897 chr22:38271891 nonsynonymous SNV 0.998 4 15 hPsi_associated_SNPs_978 0 0 1 0 0 Cytosol 1 0.932760949984988 1 0.134478100030023 hPsi_site_7599 iPseU_CNN:1;iRNA_PseU:0.134478100030023 7600 chr17 18781090 18781090 1 + G A LGG 18781102 + 18781082 18781122 41 TCATTGGCGTGATACCCTACTTTCCTTACAGCAAGCAGTGC TCATTGGCATGATACCCTACTTTCCTTACAGCAAGCAGTGC < 41bp 1 0.205792934610664 1 0.999998331069946 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18781102 chr17:18781090 nonsynonymous SNV 0.787 5 9 hPsi_associated_SNPs_979 0 0 1 0 2 Ribosome 1 0.855771475537264 3.33786010808801e-06 0.288457048925472 hPsi_site_7600 iPseU_CNN:3.33786010808801e-06;iRNA_PseU:0.288457048925472 7601 chr1 107599766 107599766 1 + A G LGG 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACGTCCTGCCGGGACCAGTGGAGACTGTGGAGTTGCCGG < 41bp 1 0.191838437380914 1 0.99893319606781 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599766 synonymous SNV . 0 31 hPsi_associated_SNPs_980 0 0 1 0 0 Ribosome 1 0.442855810518359 0.0021336078643801 1 hPsi_site_7601 iPseU_CNN:0.0021336078643801;iRNA_PseU:1 7602 chr11 6630830 6630830 1 + G T LGG 6630812 + 6630792 6630832 41 CCACCTGCTCCTCATCCTACTCTCATCACACACTGGATGCC CCACCTGCTCCTCATCCTACTCTCATCACACACTGGATTCC < 41bp 1 0.511069850547932 1 0.986496448516846 experiment 0.977860298904137 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6630812 chr11:6630830 nonsynonymous SNV 1.000 2 39 hPsi_associated_SNPs_982 0 0 0 0 2 Endoplasmic reticulum 1 0.73920789474518 0.0270071029663079 0.52158421050964 hPsi_site_7602 iPseU_CNN:0.0270071029663079;iRNA_PseU:0.52158421050964 7603 chr16 2817164 2817164 1 + C A LGG 2817162 + 2817142 2817182 41 GCTGCAAGAATGTCCCAGGTTCCAGCCCCGGTGCCTCTCAT GCTGCAAGAATGTCCCAGGTTCAAGCCCCGGTGCCTCTCAT < 41bp 1 0.683463994298462 1 0.999988675117493 experiment 0.633072011403076 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2817162 chr16:2817164 nonsynonymous SNV 0.991 3 23 hPsi_associated_SNPs_983 0 0 1 0 0 Nucleus 1 0.438718051222453 2.26497650139823e-05 1 hPsi_site_7603 iPseU_CNN:2.26497650139823e-05;iRNA_PseU:1 7604 chr5 78919187 78919187 1 + A C LGG 78919171 + 78919151 78919191 41 GTAGTTAACCAGATAGTGCCTTTATCAGGTGAACGAAGATA GTAGTTAACCAGATAGTGCCTTTATCAGGTGAACGACGATA < 41bp 1 0.670348956230141 1 0.998549520969391 experiment 0.659302087539718 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PAPD4 ENSG00000164329 CDS Human protein_coding chr5:78919171 chr5:78919187 synonymous SNV . 0 37 hPsi_associated_SNPs_985 0 0 1 0 0 Ribosome 1 0.438718705372663 0.00290095806121804 1 hPsi_site_7604 iPseU_CNN:0.00290095806121804;iRNA_PseU:1 7605 chr17 78079616 78079616 1 + G A LGG 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGGCACCATCCCCACTCTACAGCGTGGAGTTCTCCG < 41bp 1 0.512737491045598 1 0.984229207038879 experiment 0.974525017908804 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079616 synonymous SNV . 0 13 hPsi_associated_SNPs_986 1 0 1 0 2 Endoplasmic reticulum 1 0.918967361005426 0.0315415859222421 0.162065277989149 hPsi_site_7605 iPseU_CNN:0.0315415859222421;iRNA_PseU:0.162065277989149 7606 chr1 92769570 92769570 1 + G A LGG 92769587 + 92769567 92769607 41 GTCGTGGATGAACGTTCTATTGTCAAACTCTGTGGTTATCC GTCATGGATGAACGTTCTATTGTCAAACTCTGTGGTTATCC < 41bp 1 0.654280893223172 1 0.99774968624115 experiment 0.691438213553657 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769587 chr1:92769570 nonsynonymous SNV 0.795 3 4 hPsi_associated_SNPs_988 0 0 1 0 2 Cytosol 1 0.598954478506599 0.00450062751769997 0.802091042986803 hPsi_site_7606 iPseU_CNN:0.00450062751769997;iRNA_PseU:0.802091042986803 7607 chr2 84518368 84518368 1 + C T LGG 84518375 + 84518355 84518395 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTTGGAGGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.606376715454498 1 0.99127721786499 experiment 0.787246569091004 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518375 chr2:84518368 . . 0 14 hPsi_associated_SNPs_989 0 0 0 0 0 unknown 1 0.438718593203377 0.01744556427002 1 hPsi_site_7607 iPseU_CNN:0.01744556427002;iRNA_PseU:1 7608 chr12 113714766 113714766 1 + C T LGG 113714773 + 113714753 113714793 41 TGACATTGAGAAACGCAAGTTCAAGTCTTTGCTACTGCACA TGACATTGAGAAATGCAAGTTCAAGTCTTTGCTACTGCACA < 41bp 1 0.547806243127795 1 0.997815668582916 experiment 0.90438751374441 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113714773 chr12:113714766 nonsynonymous SNV 0.959 2 14 hPsi_associated_SNPs_990 0 0 0 0 1 chromatin 1 0.995011705168689 0.00436866283416792 0.00997658966262116 hPsi_site_7608 iPseU_CNN:0.00436866283416792;iRNA_PseU:0.00997658966262116 7609 chr7 102944426 102944426 1 + G A LGG 102944421 + 102944401 102944441 41 AGAAGTTGTTTTTGATTATCTTCATGCCACAGCTTATCAAA AGAAGTTGTTTTTGATTATCTTCATACCACAGCTTATCAAA < 41bp 1 0.599517243626529 1 0.999590754508972 experiment 0.800965512746941 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PMPCB ENSG00000105819 CDS Human protein_coding chr7:102944421 chr7:102944426 nonsynonymous SNV 1.000 2 26 hPsi_associated_SNPs_991 0 0 1 0 1 Ribosome 1 0.536867414778069 0.000818490982056108 0.926265170443862 hPsi_site_7609 iPseU_CNN:0.000818490982056108;iRNA_PseU:0.926265170443862 7610 chrX 153994250 153994250 1 + G T LGG 153994236 + 153994216 153994256 41 ATACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAG ATACACCTCTTGCATGTGGTTCAAATCCTCTGAATAGAGAG < 41bp 1 0.1589200385384 1 0.995465040206909 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control DKC1 ENSG00000130826 CDS Human protein_coding chrX:153994236 chrX:153994250 nonsynonymous SNV 1.000 2 35 hPsi_associated_SNPs_992 0 0 1 0 2 Cytosol 1 0.449446974053296 0.00906991958618208 1 hPsi_site_7610 iPseU_CNN:0.00906991958618208;iRNA_PseU:1 7611 chr14 24464264 24464264 1 + C T LGG 24464261 + 24464241 24464281 41 GCTGTGAAGCTTCATGGAGGTATCGATATCCTAGTCTCCAA GCTGTGAAGCTTCATGGAGGTATTGATATCCTAGTCTCCAA < 41bp 1 0.257276501611317 1 0.998971581459045 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHRS4L2 ENSG00000187630 CDS Human protein_coding chr14:24464261 chr14:24464264 synonymous SNV . 0 24 hPsi_associated_SNPs_993 0 0 0 2 1 exosome 1 0.438719317359432 0.00205683708191007 1 hPsi_site_7611 iPseU_CNN:0.00205683708191007;iRNA_PseU:1 7612 chr12 113629341 113629341 1 + G A LGG 113629360 + 113629340 113629380 41 AGCGGCAGACTCCCAGAAGTTATCTATGGGTGGGTTACACT AACGGCAGACTCCCAGAAGTTATCTATGGGTGGGTTACACT < 41bp 1 0.618024558698749 1 0.99959808588028 experiment 0.763950882602502 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629360 chr12:113629341 nonsynonymous SNV 0.000 0 2 hPsi_associated_SNPs_994 0 0 0 0 0 Ribosome 1 0.646455703474384 0.00080382823944003 0.707088593051232 hPsi_site_7612 iPseU_CNN:0.00080382823944003;iRNA_PseU:0.707088593051232 7613 chr3 49751542 49751542 1 + G A LGG 49751544 + 49751524 49751564 41 GCTGTGGCTTCGGGTACCGCTATACACGGCTGCCACATCTG GCTGTGGCTTCGGGTACCACTATACACGGCTGCCACATCTG < 41bp 1 0.490780896820428 1 0.999822854995728 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49751544 chr3:49751542 nonsynonymous SNV 1.000 4 19 hPsi_associated_SNPs_995 0 0 0 0 1 Nucleus 1 0.461762352540699 0.000354290008544034 1 hPsi_site_7613 iPseU_CNN:0.000354290008544034;iRNA_PseU:1 7614 chr17 39973393 39973393 1 + G A LGG 39973390 + 39973370 39973410 41 GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC GGACCGAGGCCTCATGGGCATGTATGTCAACGAGCGGCGAC < 41bp 1 0.383043093867649 1 1 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39973390 chr17:39973393 nonsynonymous SNV 0.998 4 24 hPsi_associated_SNPs_996 0 0 1 0 2 Nucleus 1 0.992189762827679 0 0.0156204743446429 hPsi_site_7614 iPseU_CNN:0;iRNA_PseU:0.0156204743446429 7615 chr17 7319304 7319304 1 + G A LGG 7319308 + 7319288 7319328 41 CGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG CGCACGGGGATGAACTACCCTATGTCTTTGGCGTGCCCATG < 41bp 1 0.626435132710372 1 0.995737314224243 experiment 0.747129734579256 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7319308 chr17:7319304 synonymous SNV . 0 17 hPsi_associated_SNPs_998 0 0 1 0 0 chromatin 1 0.656533166479761 0.00852537155151389 0.686933667040477 hPsi_site_7615 iPseU_CNN:0.00852537155151389;iRNA_PseU:0.686933667040477 7616 chr11 6630817 6630817 1 + T C LIHC 6630812 + 6630792 6630832 41 CCACCTGCTCCTCATCCTACTCTCATCACACACTGGATGCC CCACCTGCTCCTCATCCTACTCTCACCACACACTGGATGCC < 41bp 1 0.390740896782288 1 0.999940633773804 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6630812 chr11:6630817 nonsynonymous SNV 0.990 5 26 hPsi_associated_SNPs_999 0 0 1 0 2 Endoplasmic reticulum 1 0.439392397053927 0.000118732452391912 1 hPsi_site_7616 iPseU_CNN:0.000118732452391912;iRNA_PseU:1 7617 chr13 48919317 48919317 1 + T C LIHC 48919311 + 48919291 48919331 41 GAAGAAGTATGATGTATTGTTTGCACTCTTCAGCAAATTGG GAAGAAGTATGATGTATTGTTTGCACCCTTCAGCAAATTGG < 41bp 1 0.636055555281017 1 0.99718189239502 experiment 0.727888889437966 Functional Loss NA| RB1 ENSG00000139687 CDS Human protein_coding chr13:48919311 chr13:48919317 nonsynonymous SNV 0.999 5 27 hPsi_associated_SNPs_1000 0 0 1 0 1 Nucleus 1 0.438710174031201 0.00563621520996005 1 hPsi_site_7617 iPseU_CNN:0.00563621520996005;iRNA_PseU:1 7618 chr14 74040268 74040268 1 + A G LIHC 74040253 + 74040233 74040273 41 TGGAGACGCTCCATCTGGAGTACTTTGAAGAAGCCATGAAC TGGAGACGCTCCATCTGGAGTACTTTGAAGAAGCCGTGAAC < 41bp 1 0.690654639676247 1 0.997882604598999 experiment 0.618690720647505 Functional Loss NA| ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74040253 chr14:74040268 nonsynonymous SNV 0.001 0 36 hPsi_associated_SNPs_1001 0 0 1 0 1 exosome 1 0.881743266274619 0.00423479080200195 0.236513467450763 hPsi_site_7618 iPseU_CNN:0.00423479080200195;iRNA_PseU:0.236513467450763 7619 chr2 136409526 136409526 1 + G C LIHC 136409528 + 136409508 136409548 41 AGCCAGTCCCTACTGCTGGATATCCTGCCTCTGGTCATCCT AGCCAGTCCCTACTGCTGCATATCCTGCCTCTGGTCATCCT < 41bp 1 0.684665419154839 1 0.997195243835449 experiment 0.630669161690322 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136409528 chr2:136409526 nonsynonymous SNV 0.940 0 19 hPsi_associated_SNPs_1002 0 0 1 0 1 Cytosol 1 0.439290409182336 0.00560951232910201 1 hPsi_site_7619 iPseU_CNN:0.00560951232910201;iRNA_PseU:1 7620 chr11 134113163 134113163 1 + G A LIHC 134113150 + 134113130 134113170 41 GTACCATGAGAATGACACGATAGCCAAGTACGAGATCATGG GTACCATGAGAATGACACGATAGCCAAGTACGAAATCATGG < 41bp 1 0.526891675629615 1 0.999966859817505 experiment 0.94621664874077 Functional Loss NA| VPS26B ENSG00000151502 CDS Human protein_coding chr11:134113150 chr11:134113163 synonymous SNV . 0 34 hPsi_associated_SNPs_1003 0 0 1 0 1 Ribosome 1 0.438730426476269 6.62803649900123e-05 1 hPsi_site_7620 iPseU_CNN:6.62803649900123e-05;iRNA_PseU:1 7621 chr17 41345518 41345518 1 + C T LIHC 41345535 + 41345515 41345555 41 TCTCACAAAGGCCAGCAATTTGGGCCTCGGGTCTGGTGCAG TCTTACAAAGGCCAGCAATTTGGGCCTCGGGTCTGGTGCAG < 41bp 1 0.251033913665861 1 0.871019601821899 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345535 chr17:41345518 nonsynonymous SNV 1.000 4 4 hPsi_associated_SNPs_1004 0 0 1 0 0 Cytosol 1 0.438736284887088 0.257960796356202 1 hPsi_site_7621 iPseU_CNN:0.257960796356202;iRNA_PseU:1 7622 chr20 34130635 34130635 1 + C A LIHC 34130617 + 34130597 34130637 41 GCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAA GCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTAAA < 41bp 1 0.546338324595324 1 0.994837999343872 experiment 0.907323350809351 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34130617 chr20:34130635 nonsynonymous SNV 0.992 1 39 hPsi_associated_SNPs_1005 0 0 1 0 2 Ribosome 1 0.438498226197676 0.0103240013122561 1 hPsi_site_7622 iPseU_CNN:0.0103240013122561;iRNA_PseU:1 7623 chr12 97337446 97337446 1 + C A LIHC 97337437 + 97337417 97337457 41 TTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAG TTCTAGTCCTCTTAATGTTTTTATGGGATATCCAGGGAAAG < 41bp 1 0.469510784802116 1 0.999771475791931 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97337437 chr12:97337446 nonsynonymous SNV 0.998 0 30 hPsi_associated_SNPs_1008 0 0 1 0 1 Nucleus 1 0.438718589877201 0.000457048416137917 1 hPsi_site_7623 iPseU_CNN:0.000457048416137917;iRNA_PseU:1 7624 chr1 104615978 104615978 1 + T C LIHC 104615996 + 104615976 104616016 41 TATGCCCTTTTGGACTTAGATTCCCTGAAGAAAAAAACTCT TACGCCCTTTTGGACTTAGATTCCCTGAAGAAAAAAACTCT < 41bp 1 0.584867863471737 1 0.999932289123535 experiment 0.830264273056527 Functional Loss NA| LOC100129138 ENSG00000215869;ENSG00000243500 ncRNA_exonic Human other chr1:104615996 chr1:104615978 . . 0 3 hPsi_associated_SNPs_1009 0 0 0 0 0 unknown 1 0.439343862066556 0.00013542175292991 1 hPsi_site_7624 iPseU_CNN:0.00013542175292991;iRNA_PseU:1 7625 chr22 38271888 38271888 1 + A G LIHC 38271897 + 38271877 38271917 41 GGTCACCACATACTATTATGTTGGGTTTGCATATTTGATGA GGTCACCACATGCTATTATGTTGGGTTTGCATATTTGATGA < 41bp 1 0.535048560466357 1 0.00108841061592102 experiment 0.929902879067287 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38271897 chr22:38271888 nonsynonymous SNV 0.998 4 12 hPsi_associated_SNPs_1010 0 0 1 0 0 Cytosol 1 0.460027483408798 1 1 hPsi_site_7625 iPseU_CNN:1;iRNA_PseU:1 7626 chr16 31926035 31926035 1 + T G LIHC 31926028 + 31926008 31926048 41 TTTGTTTCACCAGCAAATACTTTCTTCTTGTGCCAAAAGCT TTTGTTTCACCAGCAAATACTTTCTTCGTGTGCCAAAAGCT < 41bp 1 0.630475391923492 1 0.99928081035614 experiment 0.739049216153016 Functional Loss NA| ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31926028 chr16:31926035 synonymous SNV . 0 28 hPsi_associated_SNPs_1011 0 0 1 0 0 chromatin 1 0.439664062141255 0.00143837928771995 1 hPsi_site_7626 iPseU_CNN:0.00143837928771995;iRNA_PseU:1 7627 chr1 45101769 45101769 1 + A G LIHC 45101766 + 45101746 45101786 41 GCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTG GCATGAGAACAACAACCGCTTTGGGGAGTATGAGTGGTGTG < 41bp 1 0.696915995911923 1 0.99653685092926 experiment 0.606168008176153 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RNF220 ENSG00000187147 CDS Human protein_coding chr1:45101766 chr1:45101769 nonsynonymous SNV 1.000 4 24 hPsi_associated_SNPs_1012 0 0 1 0 2 Ribosome 1 0.438723509374052 0.00692629814147994 1 hPsi_site_7627 iPseU_CNN:0.00692629814147994;iRNA_PseU:1 7628 chr22 39066933 39066933 1 + A G LIHC 39066942 + 39066922 39066962 41 TTGGAATACGGATCCCCGACTATGAACCTGGCAGGGCAAAG TTGGAATACGGGTCCCCGACTATGAACCTGGCAGGGCAAAG < 41bp 1 0.647958737877623 1 0.987845182418823 experiment 0.704082524244753 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CBY1 ENSG00000100211 CDS Human protein_coding chr22:39066942 chr22:39066933 synonymous SNV . 0 12 hPsi_associated_SNPs_1013 0 0 1 0 2 Ribosome 1 0.444218269206368 0.024309635162354 1 hPsi_site_7628 iPseU_CNN:0.024309635162354;iRNA_PseU:1 7629 chr3 152553969 152553969 1 + T C LIHC 152553956 + 152553936 152553976 41 CCATGTGTAAACTGCAGAGGTTCATCTTTCATGTGAACCTC CCATGTGTAAACTGCAGAGGTTCATCTTTCATGCGAACCTC < 41bp 1 0.451616048733223 1 0.998690783977509 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553956 chr3:152553969 nonsynonymous SNV 0.990 1 34 hPsi_associated_SNPs_1014 0 0 1 0 0 Endoplasmic reticulum 1 0.457185685080238 0.00261843204498202 1 hPsi_site_7629 iPseU_CNN:0.00261843204498202;iRNA_PseU:1 7630 chr3 155623973 155623973 1 + T C LIHC 155623975 + 155623955 155623995 41 TCAGAAGGAAGAAGTTGTTTTGCTTACACATGGAGATAGTG TCAGAAGGAAGAAGTTGTCTTGCTTACACATGGAGATAGTG < 41bp 1 0.112014787487583 1 0.797742545604706 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GMPS ENSG00000163655 CDS Human protein_coding chr3:155623975 chr3:155623973 synonymous SNV . 0 19 hPsi_associated_SNPs_1015 0 0 1 0 2 Nucleus 1 0.480291914233793 0.404514908790588 1 hPsi_site_7630 iPseU_CNN:0.404514908790588;iRNA_PseU:1 7631 chr9 131133678 131133678 1 + G C LIHC 131133679 + 131133659 131133699 41 CATGGCTGCGCCCTTGTCAGTGGAGGTGGAGTTCGGGTGAG CATGGCTGCGCCCTTGTCACTGGAGGTGGAGTTCGGGTGAG < 41bp 1 0.0490138493012522 1 0.999873578548431 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide URM1 ENSG00000167118 CDS Human protein_coding chr9:131133679 chr9:131133678 nonsynonymous SNV 0.998 0 20 hPsi_associated_SNPs_1016 0 0 1 0 1 Ribosome 1 0.438715139698463 0.000252842903138095 1 hPsi_site_7631 iPseU_CNN:0.000252842903138095;iRNA_PseU:1 7632 chr1 82302636 82302636 1 + A G LIHC 82302656 + 82302636 82302676 41 AGGAATACAAAGAAAATACTTAAAGGGATCAATAATGGTGT GGGAATACAAAGAAAATACTTAAAGGGATCAATAATGGTGT < 41bp 1 0.260168065582521 1 0.997171103954315 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ADGRL2 ENSG00000117114 UTR5 Human protein_coding chr1:82302656 chr1:82302636 . . 0 1 hPsi_associated_SNPs_1017 0 0 1 0 1 cytosol 1 0.438747433263746 0.00565779209137007 1 hPsi_site_7632 iPseU_CNN:0.00565779209137007;iRNA_PseU:1 not specified not specified 7633 chr5 74009453 74009453 1 + G T LIHC 74009441 + 74009421 74009461 41 GAATTTGATACCCCTGGGCATACACTATCTTGGGGAAAAGG GAATTTGATACCCCTGGGCATACACTATCTTGTGGAAAAGG < 41bp 1 0.268026894503573 1 0.513819456100464 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:74009441 chr5:74009453 nonsynonymous SNV 0.998 5 33 hPsi_associated_SNPs_1018 0 0 1 0 1 Cytosol 1 0.438717322776787 0.972361087799072 1 hPsi_site_7633 iPseU_CNN:0.972361087799072;iRNA_PseU:1 7634 chr10 7844732 7844732 1 + G T LIHC 7844750 + 7844730 7844770 41 TTGACAAATTGACATTGACATTCAACCGTACCCGCCAAGCT TTTACAAATTGACATTGACATTCAACCGTACCCGCCAAGCT < 41bp 1 0.489542115083153 1 0.999792695045471 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844750 chr10:7844732 nonsynonymous SNV 1.000 4 3 hPsi_associated_SNPs_1019 0 0 1 0 2 Ribosome 1 0.438711419891864 0.000414609909058061 1 hPsi_site_7634 iPseU_CNN:0.000414609909058061;iRNA_PseU:1 7635 chr17 74740473 74740473 1 + T C LIHC 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGGGGACAGTTCTATTCTTTCCCATTCGGAA < 41bp 1 0.468727992626764 1 0.999998569488525 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740473 nonsynonymous SNV 1.000 5 32 hPsi_associated_SNPs_1020 0 0 1 0 2 Endoplasmic reticulum 1 0.441196675328499 2.86102295010693e-06 1 hPsi_site_7635 iPseU_CNN:2.86102295010693e-06;iRNA_PseU:1 7636 chr2 109086528 109086528 1 + A G LIHC 109086516 + 109086496 109086536 41 GCAGGAAGAGCTTTTACAGTTGAAAGCTATACACCAAGAAG GCAGGAAGAGCTTTTACAGTTGAAAGCTATACGCCAAGAAG < 41bp 1 0.276973713520585 1 0.99530041217804 experiment 1 Functional Loss NA| GCC2 ENSG00000135968 CDS Human protein_coding chr2:109086516 chr2:109086528 nonsynonymous SNV 0.085 3 33 hPsi_associated_SNPs_1021 0 0 1 0 0 chromatin 1 0.448107325645832 0.00939917564392001 1 hPsi_site_7636 iPseU_CNN:0.00939917564392001;iRNA_PseU:1 7637 chr11 70049591 70049591 1 + A G LIHC 70049575 + 70049555 70049595 41 CAGACCCCGCCATGGACCCGTTCCTGGTGCTGCTGCACTCG CAGACCCCGCCATGGACCCGTTCCTGGTGCTGCTGCGCTCG < 41bp 1 0.395287808237626 1 0.999991714954376 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FADD ENSG00000168040 CDS Human protein_coding chr11:70049575 chr11:70049591 nonsynonymous SNV 0.998 4 37 hPsi_associated_SNPs_1022 0 0 1 0 0 Ribosome 1 0.445553740679039 1.65700912480027e-05 1 hPsi_site_7637 iPseU_CNN:1.65700912480027e-05;iRNA_PseU:1 7638 chr1 53493687 53493687 1 + A G LIHC 53493671 + 53493651 53493691 41 ACTCATCAAATTGAAGCTGTTCCAACCAGCTCTGCAAGTGA ACTCATCAAATTGAAGCTGTTCCAACCAGCTCTGCAGGTGA < 41bp 1 0.256478426032578 1 0.9923495054245 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53493671 chr1:53493687 nonsynonymous SNV 0.979 0 37 hPsi_associated_SNPs_1023 0 0 1 0 3 Ribosome 1 0.532410583986067 0.0153009891510001 0.935178832027865 hPsi_site_7638 iPseU_CNN:0.0153009891510001;iRNA_PseU:0.935178832027865 7639 chr12 97337452 97337452 1 + G T LIHC 97337437 + 97337417 97337457 41 TTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAG TTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGTGAAAG < 41bp 1 0.218894619913357 1 0.995087146759033 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97337437 chr12:97337452 nonsynonymous SNV 1.000 0 36 hPsi_associated_SNPs_1024 0 0 1 0 1 Nucleus 1 0.438719587428288 0.00982570648193404 1 hPsi_site_7639 iPseU_CNN:0.00982570648193404;iRNA_PseU:1 7640 chr6 25973470 25973470 1 + C T LIHC 25973477 + 25973457 25973497 41 TGTGCAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATG TGTGCAATGTTTCTAAGCTTTACTTCGATGTGAAGAAAATG < 41bp 1 0.363142012319543 1 0.997673392295837 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25973477 chr6:25973470 synonymous SNV . 0 14 hPsi_associated_SNPs_1025 0 0 1 0 1 Cytosol 1 0.438718883692811 0.00465321540832608 1 hPsi_site_7640 iPseU_CNN:0.00465321540832608;iRNA_PseU:1 7641 chr17 34848721 34848721 1 + C T LIHC 34848708 + 34848688 34848728 41 GAAAAAAATAAGATCAGCTCTTCCTACCAAAACCGTAAAGC GAAAAAAATAAGATCAGCTCTTCCTACCAAAACTGTAAAGC < 41bp 1 0.412785472364842 1 0.348659157752991 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNHIT3 ENSG00000108278 CDS Human other chr17:34848708 chr17:34848721 synonymous SNV . 0 34 hPsi_associated_SNPs_1026 0 0 1 0 2 Cytosol 1 0.497353792947569 1 1 hPsi_site_7641 iPseU_CNN:1;iRNA_PseU:1 7642 chr19 11548906 11548906 1 + A G LIHC 11548911 + 11548891 11548931 41 GCTGCGATGGAACAGACGAGTACAACAGCGGCGTCATCTGT GCTGCGATGGAACAGGCGAGTACAACAGCGGCGTCATCTGT < 41bp 1 0.405253578315477 1 0.999999046325684 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548911 chr19:11548906 nonsynonymous SNV 0.984 4 16 hPsi_associated_SNPs_1027 0 0 1 0 2 Nucleus 1 0.443364083380059 1.90734863192432e-06 1 hPsi_site_7642 iPseU_CNN:1.90734863192432e-06;iRNA_PseU:1 7643 chr3 23959939 23959939 1 + A G LIHC 23959949 + 23959929 23959969 41 AGGTTACGTTATATATAGGATTCGTGTTCGCCGTGGTGGCC AGGTTACGTTGTATATAGGATTCGTGTTCGCCGTGGTGGCC < 41bp 1 0.543822698822615 1 0.999915838241577 experiment 0.91235460235477 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL15 ENSG00000174748 CDS Human protein_coding chr3:23959949 chr3:23959939 nonsynonymous SNV 0.856 0 11 hPsi_associated_SNPs_1028 0 0 1 0 1 Cytosol 1 0.989238263270661 0.000168323516845925 0.0215234734586771 hPsi_site_7643 iPseU_CNN:0.000168323516845925;iRNA_PseU:0.0215234734586771 7644 chr9 132636872 132636872 1 + A T LIHC 132636880 + 132636860 132636900 41 GTGCATTCACCTAAAGCGCTTTCGGCACGAGGTGATGTACT GTGCATTCACCTTAAGCGCTTTCGGCACGAGGTGATGTACT < 41bp 1 0.513180895309217 1 0.974144458770752 experiment 0.973638209381565 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132636880 chr9:132636872 synonymous SNV . 0 13 hPsi_associated_SNPs_1029 0 0 0 0 1 chromatin 1 0.999984170071157 0.0517110824584961 3.16598576852734e-05 hPsi_site_7644 iPseU_CNN:0.0517110824584961;iRNA_PseU:3.16598576852734e-05 7645 chr16 30779293 30779293 1 + G A LIHC 30779308 + 30779288 30779328 41 CCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGA CCAGCAATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGA < 41bp 1 0.299943012420674 1 0.999998211860657 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779308 chr16:30779293 nonsynonymous SNV 0.999 4 6 hPsi_associated_SNPs_1030 0 0 1 0 2 Ribosome 1 0.444329850099662 3.57627868607935e-06 1 hPsi_site_7645 iPseU_CNN:3.57627868607935e-06;iRNA_PseU:1 7646 chr1 27177682 27177682 1 + A T LIHC 27177678 + 27177658 27177698 41 CCATTCTGGGCCTCTCAGGGTTTCACACGTACCTCGTCGCC CCATTCTGGGCCTCTCAGGGTTTCTCACGTACCTCGTCGCC < 41bp 1 0.247999716660325 1 0.999466598033905 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZDHHC18 ENSG00000204160 CDS Human protein_coding chr1:27177678 chr1:27177682 nonsynonymous SNV 0.988 4 25 hPsi_associated_SNPs_1031 0 0 1 0 1 Ribosome 1 0.759974124448968 0.00106680393218994 0.480051751102063 hPsi_site_7646 iPseU_CNN:0.00106680393218994;iRNA_PseU:0.480051751102063 7647 chr2 207655393 207655393 1 + G T LIHC 207655397 + 207655377 207655417 41 GCATTTGAATGCAATGGGTTTTCATGTGATCTTGGTGAGAA GCATTTGAATGCAATGTGTTTTCATGTGATCTTGGTGAGAA < 41bp 1 0.246816150997581 1 0.987715721130371 experiment 1 Functional Loss NA| FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207655397 chr2:207655393 nonsynonymous SNV 0.999 5 17 hPsi_associated_SNPs_1032 0 0 1 0 2 Nucleus 1 0.435377792785518 0.024568557739258 1 hPsi_site_7647 iPseU_CNN:0.024568557739258;iRNA_PseU:1 7648 chr7 16714111 16714111 1 + C T LUAD 16714130 + 16714110 16714150 41 CCTTGAAGCTGTAGCCAAATTTCTGGACTCTACAGGCTCAA CTTTGAAGCTGTAGCCAAATTTCTGGACTCTACAGGCTCAA < 41bp 1 0.328304991357334 1 0.999624073505402 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BZW2 ENSG00000136261 CDS Human protein_coding chr7:16714130 chr7:16714111 nonsynonymous SNV 1.000 3 2 hPsi_associated_SNPs_1033 0 0 1 0 1 Ribosome 1 0.43871859396319 0.000751852989195889 1 hPsi_site_7648 iPseU_CNN:0.000751852989195889;iRNA_PseU:1 7649 chr17 47120823 47120823 1 + G T LUAD 47120830 + 47120810 47120850 41 TGGCCTGAACCTGGCTGCTGTAGGTCTTTTCCCAGCTTCAT TGGCCTGAACCTGTCTGCTGTAGGTCTTTTCCCAGCTTCAT < 41bp 1 0.388308770177044 1 0.996384620666504 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47120830 chr17:47120823 nonsynonymous SNV 0.998 1 14 hPsi_associated_SNPs_1034 0 0 1 0 2 Ribosome 1 0.438831214713702 0.00723075866699197 1 hPsi_site_7649 iPseU_CNN:0.00723075866699197;iRNA_PseU:1 7650 chr12 16043573 16043573 1 + C T LUAD 16043571 + 16043551 16043591 41 CGGGGGACAGGATAAACTGTTACGCATATATGACTTGAACA CGGGGGACAGGATAAACTGTTATGCATATATGACTTGAACA < 41bp 1 0.427071487852247 1 0.999652981758118 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STRAP ENSG00000023734 CDS Human protein_coding chr12:16043571 chr12:16043573 nonsynonymous SNV 0.998 4 23 hPsi_associated_SNPs_1035 0 0 1 0 2 Ribosome 1 0.954122825772348 0.000694036483763982 0.0917543484553038 hPsi_site_7650 iPseU_CNN:0.000694036483763982;iRNA_PseU:0.0917543484553038 7651 chr17 74740468 74740468 1 + C T LUAD 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGGGGACAGTTCTATTTTTTCTCATTCGGAA < 41bp 1 0.388444734425978 1 0.952787160873413 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740468 synonymous SNV . 0 27 hPsi_associated_SNPs_1036 0 0 1 0 2 Endoplasmic reticulum 1 0.438718678386737 0.0944256782531741 1 hPsi_site_7651 iPseU_CNN:0.0944256782531741;iRNA_PseU:1 7652 chrX 100646510 100646510 1 + G A LUAD 100646506 + 100646486 100646526 41 TGTGGCAAGCACCAACCCCATAAAGTGACACAGTACAAGAA TGTGGCAAGCACCAACCCCATAAAATGACACAGTACAAGAA < 41bp 1 0.394020342283178 1 2.89082527160645e-05 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646506 chrX:100646510 nonsynonymous SNV 1.000 2 25 hPsi_associated_SNPs_1037 0 0 1 0 1 unknown 1 0.49311928747311 1 1 hPsi_site_7652 iPseU_CNN:1;iRNA_PseU:1 7653 chr1 204379707 204379707 1 + G A LUAD 204379716 - 204379696 204379736 41 GCCGCTGAGTGCAGAACTCATTCCGGCCTCGTGGCAGGGAT GCCGCTGAGTGCAGAACTCATTCCGGCCTTGTGGCAGGGAT < 41bp 1 0.311448256287398 1 0.12664732336998 experiment 1 Functional Loss NA| PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204379716 chr1:204379707 nonsynonymous SNV 0.022 1 30 hPsi_associated_SNPs_1038 0 0 1 0 0 Ribosome 1 0.444349949684053 1 1 hPsi_site_7653 iPseU_CNN:1;iRNA_PseU:1 7654 chr4 123192465 123192465 1 + A T LUAD 123192452 + 123192432 123192472 41 ATCAAAGCAACTCAGACTGATATTAAACTTAGCAGATATAC ATCAAAGCAACTCAGACTGATATTAAACTTAGCTGATATAC < 41bp 1 0.210899696516369 1 0.999550879001617 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123192452 chr4:123192465 stopgain 0.995 1 34 hPsi_associated_SNPs_1039 0 0 0 0 0 Nucleus 1 0.953998472659898 0.000898241996766025 0.0920030546802033 hPsi_site_7654 iPseU_CNN:0.000898241996766025;iRNA_PseU:0.0920030546802033 7655 chr6 348916 348916 1 + C A LUAD 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTACGCTG < 41bp 1 0.437031469206879 1 0.999784350395203 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348916 nonsynonymous SNV 0.001 0 36 hPsi_associated_SNPs_1040 0 0 0 0 0 Ribosome 1 0.438720874915157 0.00043129920959406 1 hPsi_site_7655 iPseU_CNN:0.00043129920959406;iRNA_PseU:1 7656 chr2 128913089 128913089 1 + A G LUAD 128913094 + 128913074 128913114 41 GTGGATGATTATGCTAGATTTACTATCTTGGATTCCCAAGG GTGGATGATTATGCTGGATTTACTATCTTGGATTCCCAAGG < 41bp 1 0.342615131250666 1 0.99892795085907 experiment 1 Functional Loss NA| UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128913094 chr2:128913089 nonsynonymous SNV 0.997 1 16 hPsi_associated_SNPs_1041 0 0 1 0 2 Nucleus 1 0.457117327133342 0.00214409828185991 1 hPsi_site_7656 iPseU_CNN:0.00214409828185991;iRNA_PseU:1 7657 chr12 120984244 120984244 1 + G A LUAD 120984237 + 120984217 120984257 41 ACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTT ACTCCAGTGGATCCAAGCGTTATAATCACAAACGTGAACTT < 41bp 1 0.576523256276633 1 0.946212232112885 experiment 0.846953487446735 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:120984237 chr12:120984244 nonsynonymous SNV 0.998 5 28 hPsi_associated_SNPs_1042 0 0 1 1 0 Ribosome 1 0.494737483361476 0.10757553577423 1 hPsi_site_7657 iPseU_CNN:0.10757553577423;iRNA_PseU:1 7658 chrX 54469901 54469901 1 + G T LUAD 54469900 + 54469880 54469920 41 ACCAACGAGTTTGATACAGTTGTGGAAGACGGGAGTCTGCC ACCAACGAGTTTGATACAGTTTTGGAAGACGGGAGTCTGCC < 41bp 1 0.612624792781179 1 0.997643947601318 experiment 0.774750414437642 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSR2 ENSG00000158526 CDS Human protein_coding chrX:54469900 chrX:54469901 nonsynonymous SNV 0.968 1 22 hPsi_associated_SNPs_1043 0 0 1 0 2 Ribosome 1 0.438735690213789 0.00471210479736395 1 hPsi_site_7658 iPseU_CNN:0.00471210479736395;iRNA_PseU:1 7659 chr1 22405022 22405022 1 + A C LUAD 22405038 + 22405018 22405058 41 AAACATGTCTCCTGATATCCTACACAACAAACAAATTTCCA AAACCTGTCTCCTGATATCCTACACAACAAACAAATTTCCA < 41bp 1 0.398274437048542 1 0.999962449073792 experiment 1 Functional Loss NA| CDC42 ENSG00000070831 CDS Human protein_coding chr1:22405038 chr1:22405022 nonsynonymous SNV . 0 5 hPsi_associated_SNPs_1044 0 0 1 0 1 Ribosome 1 0.438714331547505 7.5101852416104e-05 1 hPsi_site_7659 iPseU_CNN:7.5101852416104e-05;iRNA_PseU:1 7660 chr11 1003792 1003792 1 + C T LUAD 1003779 + 1003759 1003799 41 CAGCTGCTTCAAATTGGACTTAAGTCTGAATTTCGGCAGAA CAGCTGCTTCAAATTGGACTTAAGTCTGAATTTTGGCAGAA < 41bp 1 0.425410326962426 1 0.993867874145508 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:1003779 chr11:1003792 nonsynonymous SNV 1.000 3 34 hPsi_associated_SNPs_1045 0 0 1 0 2 Nucleus 1 0.498456290983222 0.0122642517089839 1 hPsi_site_7660 iPseU_CNN:0.0122642517089839;iRNA_PseU:1 7661 chr11 65304157 65304157 1 + G C LUAD 65304163 + 65304143 65304183 41 CTCACCTCCAAGCTGATCCGTTCGCACCCAACCACTGCCCC CTCACCTCCAAGCTCATCCGTTCGCACCCAACCACTGCCCC < 41bp 1 0.474961259993002 1 0.998989701271057 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65304163 chr11:65304157 synonymous SNV . 0 15 hPsi_associated_SNPs_1046 0 0 0 0 1 Ribosome 1 0.437716240637795 0.00202059745788596 1 hPsi_site_7661 iPseU_CNN:0.00202059745788596;iRNA_PseU:1 7662 chr2 233321725 233321725 1 + G T LUAD 233321719 + 233321699 233321739 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCAGCCGCCCGCTTTAACCATTGCAACACGACACG < 41bp 1 0.422786759349141 1 0.999616920948029 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPI ENSG00000163295 CDS Human protein_coding chr2:233321719 chr2:233321725 nonsynonymous SNV 0.303 2 27 hPsi_associated_SNPs_1047 0 0 1 0 1 Cytosol 1 0.438718512892355 0.000766158103941983 1 hPsi_site_7662 iPseU_CNN:0.000766158103941983;iRNA_PseU:1 7663 chr11 85345207 85345207 1 + G C LUAD 85345188 + 85345168 85345208 41 CAGCTGGTTTCTCTGGAATATTCTCAAACTTCCTGTTCAGA CAGCTGGTTTCTCTGGAATATTCTCAAACTTCCTGTTCACA < 41bp 1 0.253751415677713 1 0.996622741222382 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM126B ENSG00000171204 CDS Human protein_coding chr11:85345188 chr11:85345207 nonsynonymous SNV 0.045 4 40 hPsi_associated_SNPs_1048 0 0 1 0 1 Cytosol 1 0.439561106805969 0.00675451755523593 1 hPsi_site_7663 iPseU_CNN:0.00675451755523593;iRNA_PseU:1 7664 chr6 348907 348907 1 + G T LUAD 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCGGTGGAGCAGTTTTCCGTCACTGGCTCCGCTG < 41bp 1 0.408155482101528 1 0.999976992607117 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348907 nonsynonymous SNV 0.000 0 27 hPsi_associated_SNPs_1049 0 0 1 0 0 Ribosome 1 0.438715347205822 4.60147857659354e-05 1 hPsi_site_7664 iPseU_CNN:4.60147857659354e-05;iRNA_PseU:1 7665 chr2 233244348 233244348 1 + G A LUAD 233244333 + 233244313 233244353 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACAACACG < 41bp 1 0.349173618095092 1 0.977376937866211 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPP ENSG00000163283 CDS Human protein_coding chr2:233244333 chr2:233244348 synonymous SNV . 0 36 hPsi_associated_SNPs_1050 0 0 0 0 1 Endoplasmic reticulum 1 0.43871865511892 0.0452461242675779 1 hPsi_site_7665 iPseU_CNN:0.0452461242675779;iRNA_PseU:1 7666 chr2 207425878 207425878 1 + G T LUAD 207425894 + 207425874 207425914 41 AGAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC AGAATCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC < 41bp 1 0.250031729056714 1 0.473813951015472 experiment 1 Functional Loss NA| ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207425894 chr2:207425878 nonsynonymous SNV 1.000 4 5 hPsi_associated_SNPs_1051 0 0 1 0 2 Ribosome 1 0.443359510500546 1 1 hPsi_site_7666 iPseU_CNN:1;iRNA_PseU:1 7667 chr17 2278921 2278921 1 + G A LUAD 2278919 + 2278899 2278939 41 GCAGCAGCATTCCGTGGAGTTCGACTCTCCAGACTCAGGAC GCAGCAGCATTCCGTGGAGTTCAACTCTCCAGACTCAGGAC < 41bp 1 0.252516903147599 1 0.996635317802429 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278919 chr17:2278921 nonsynonymous SNV 0.998 2 23 hPsi_associated_SNPs_1052 0 0 1 0 0 Cytosol 1 0.458221299389635 0.00672936439514205 1 hPsi_site_7667 iPseU_CNN:0.00672936439514205;iRNA_PseU:1 7668 chr5 38885506 38885506 1 + G A LUAD 38885512 + 38885492 38885532 41 GACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACGGA GACTTCAAGACTTTACACTGTACTTGGGATCCTGGGACGGA < 41bp 1 0.660450724271655 1 0.838786959648132 experiment 0.679098551456691 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide OSMR ENSG00000145623 CDS Human protein_coding chr5:38885512 chr5:38885506 synonymous SNV . 0 15 hPsi_associated_SNPs_1053 0 0 1 0 2 Nucleus 1 0.456466158043551 0.322426080703736 1 hPsi_site_7668 iPseU_CNN:0.322426080703736;iRNA_PseU:1 7669 chr19 52719903 52719903 1 + A T LUAD 52719893 + 52719873 52719913 41 TCGAGCACCTCTTGCCCCTCTTCCTGGCTCAGCTGAAGGAT TCGAGCACCTCTTGCCCCTCTTCCTGGCTCTGCTGAAGGAT < 41bp 1 0.620963458914609 1 0.971604585647583 experiment 0.758073082170783 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52719893 chr19:52719903 nonsynonymous SNV 1.000 0 31 hPsi_associated_SNPs_1055 0 0 1 0 0 Ribosome 1 0.782482960778546 0.056790828704834 0.435034078442908 hPsi_site_7669 iPseU_CNN:0.056790828704834;iRNA_PseU:0.435034078442908 Serum uric acid levels 7670 chr12 104732926 104732926 1 + G A LUAD 104732933 + 104732913 104732953 41 TTAGGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG TTAGGAACGTGTTATGGGCTTTCACGTACTGGGTCCAAATG < 41bp 1 0.629201307061071 1 0.999969244003296 experiment 0.741597385877859 Functional Loss NA| TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732933 chr12:104732926 nonsynonymous SNV 0.994 5 14 hPsi_associated_SNPs_1056 0 0 1 0 1 Ribosome 1 0.457129742674571 6.15119934079811e-05 1 hPsi_site_7670 iPseU_CNN:6.15119934079811e-05;iRNA_PseU:1 7671 chr4 160275017 160275017 1 + C T LUAD 160275023 + 160275003 160275043 41 AGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAGACTCAGA AGCTGGGCGTCTTCTACAGGTTACTGGGGAGAAGACTCAGA < 41bp 1 0.532384374936472 1 0.703757703304291 experiment 0.935231250127057 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160275023 chr4:160275017 synonymous SNV . 0 15 hPsi_associated_SNPs_1057 0 0 1 0 0 Cytosol 1 0.438962583563294 0.592484593391418 1 hPsi_site_7671 iPseU_CNN:0.592484593391418;iRNA_PseU:1 Alanine aminotransferase (ALT) levels after remission induction therapy in actute lymphoblastic leukemia (ALL) 7672 chr1 1387779 1387779 1 + G T LUAD 1387773 + 1387753 1387793 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCCGTTCCTTTGTGACAGAC < 41bp 1 0.587022750635302 1 0.999698638916016 experiment 0.825954498729395 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387773 chr1:1387779 nonsynonymous SNV 0.946 2 27 hPsi_associated_SNPs_1058 0 0 0 0 2 Nucleus 1 0.538087939347762 0.000602722167968084 0.923824121304476 hPsi_site_7672 iPseU_CNN:0.000602722167968084;iRNA_PseU:0.923824121304476 7673 chr1 1417959 1417959 1 + G T LUAD 1417953 + 1417933 1417973 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCCGTTCCTTTGTGACAGAC < 41bp 1 0.564189235984568 1 0.999698638916016 experiment 0.871621528030865 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417953 chr1:1417959 nonsynonymous SNV 0.988 2 27 hPsi_associated_SNPs_1059 0 0 1 0 2 Ribosome 1 0.538087939347762 0.000602722167968084 0.923824121304476 hPsi_site_7673 iPseU_CNN:0.000602722167968084;iRNA_PseU:0.923824121304476 7674 chr2 171818182 171818182 1 + C T LUAD 171818194 + 171818174 171818214 41 TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGT TGTACCAATAGTACCGTTATTGCCACCACAAGTAAACCAGT < 41bp 1 0.275017408428898 1 0.993882298469543 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818194 chr2:171818182 nonsynonymous SNV 1.000 3 9 hPsi_associated_SNPs_1061 0 0 1 0 2 Ribosome 1 0.455090955206415 0.012235403060914 1 hPsi_site_7674 iPseU_CNN:0.012235403060914;iRNA_PseU:1 7675 chrX 123211828 123211828 1 + A G LUAD 123211815 + 123211795 123211835 41 ATTTCTTTATAGTATTATAATGACTATGGAGATATCATCAA ATTTCTTTATAGTATTATAATGACTATGGAGATGTCATCAA < 41bp 1 0.499384950853681 1 0.844553828239441 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide STAG2 ENSG00000101972 CDS Human protein_coding chrX:123211815 chrX:123211828 nonsynonymous SNV 1.000 4 34 hPsi_associated_SNPs_1062 0 0 1 0 2 Nucleus 1 0.979420675416237 0.310892343521118 0.0411586491675255 hPsi_site_7675 iPseU_CNN:0.310892343521118;iRNA_PseU:0.0411586491675255 7676 chr5 139918961 139918961 1 + G C LUAD 139918972 + 139918952 139918992 41 TGGCACGTGGGCACCTCATATTGGAAACATGCATCTCAAAT TGGCACGTGCGCACCTCATATTGGAAACATGCATCTCAAAT < 41bp 1 0.648599291616437 1 0.983189702033997 experiment 0.702801416767125 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ANKHD1 ENSG00000131503 CDS Human protein_coding chr5:139918972 chr5:139918961 nonsynonymous SNV 1.000 3 10 hPsi_associated_SNPs_1063 0 0 1 0 1 Ribosome 1 0.440599966976077 0.0336205959320059 1 hPsi_site_7676 iPseU_CNN:0.0336205959320059;iRNA_PseU:1 7677 chr1 107599740 107599740 1 + G T LUAD 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACTTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG < 41bp 1 0.231137435956626 1 0.999128699302673 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599740 nonsynonymous SNV 0.996 4 5 hPsi_associated_SNPs_1065 0 0 1 0 0 Ribosome 1 0.438719111080479 0.00174260139465399 1 hPsi_site_7677 iPseU_CNN:0.00174260139465399;iRNA_PseU:1 7678 chr1 107599749 107599749 1 + G A LUAD 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACGTCCTGCCGAGACCAGTGGAGACTGTAGAGTTGCCGG < 41bp 1 0.14707914265891 1 0.42262864112854 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599749 nonsynonymous SNV 0.851 3 14 hPsi_associated_SNPs_1066 0 0 1 0 0 Ribosome 1 0.441754100422374 1 1 hPsi_site_7678 iPseU_CNN:1;iRNA_PseU:1 7679 chr6 1390746 1390746 1 + G A LUAD 1390747 + 1390727 1390767 41 TCATGTTCGAGGAGGGCTCGTTCCGCCGCCGGCCGCGCGGC TCATGTTCGAGGAGGGCTCATTCCGCCGCCGGCCGCGCGGC < 41bp 1 0.615077716036133 1 0.984410285949707 experiment 0.769844567927734 Functional Loss NA| FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390747 chr6:1390746 synonymous SNV . 0 20 hPsi_associated_SNPs_1067 0 0 0 0 0 exosome 1 0.580984839635051 0.0311794281005859 0.838030320729898 hPsi_site_7679 iPseU_CNN:0.0311794281005859;iRNA_PseU:0.838030320729898 7680 chr21 45400903 45400903 1 + A G LUAD 45400922 + 45400902 45400942 41 CATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCGGAGGCCGT CGTGTTTCCAGGGGAGCAGTTTAAGCCTGCCCGGAGGCCGT < 41bp 1 0.521817590487204 1 0.999824166297913 experiment 0.956364819025592 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGPAT3 ENSG00000160216 CDS Human protein_coding chr21:45400922 chr21:45400903 nonsynonymous SNV 0.077 0 2 hPsi_associated_SNPs_1070 0 0 1 0 1 Endoplasmic reticulum 1 0.439988359027647 0.000351667404173917 1 hPsi_site_7680 iPseU_CNN:0.000351667404173917;iRNA_PseU:1 7681 chr17 37357550 37357550 1 + T C LUAD 37357531 + 37357511 37357551 41 TGGCAAGAAGAAGGTCTGGTTAGACCCCAATGAGACCAATG TGGCAAGAAGAAGGTCTGGTTAGACCCCAATGAGACCAACG < 41bp 1 0.66931625739137 1 0.999874353408813 experiment 0.66136748521726 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357531 chr17:37357550 synonymous SNV . 0 40 hPsi_associated_SNPs_1071 0 0 1 0 2 chromatin 1 0.471317569796793 0.000251293182373935 1 hPsi_site_7681 iPseU_CNN:0.000251293182373935;iRNA_PseU:1 7682 chr9 127113174 127113174 1 + G A LUAD 127113176 + 127113156 127113196 41 ACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAG ACCAGAGACCTGACATCGAATACGTGCACCAGGTGGCCAAG < 41bp 1 0.375277201521162 1 0.998195886611938 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NEK6 ENSG00000119408 CDS Human protein_coding chr9:127113176 chr9:127113174 nonsynonymous SNV 0.157 0 19 hPsi_associated_SNPs_1072 0 0 1 0 1 Cytosol 1 0.403987234508606 0.00360822677612394 1 hPsi_site_7682 iPseU_CNN:0.00360822677612394;iRNA_PseU:1 7683 chr11 65268734 65268734 1 + T A LUAD 65268752 + 65268732 65268772 41 AGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAA AGATCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAA < 41bp 1 0.135552653033747 1 0.998944520950317 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268752 chr11:65268734 . . 0 3 hPsi_associated_SNPs_1073 0 0 1 0 0 unknown 1 0.438718592958035 0.0021109580993659 1 hPsi_site_7683 iPseU_CNN:0.0021109580993659;iRNA_PseU:1 7684 chrX 123211830 123211830 1 + C T LUAD 123211815 + 123211795 123211835 41 ATTTCTTTATAGTATTATAATGACTATGGAGATATCATCAA ATTTCTTTATAGTATTATAATGACTATGGAGATATTATCAA < 41bp 1 0.119522667676444 1 0.979694008827209 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide STAG2 ENSG00000101972 CDS Human protein_coding chrX:123211815 chrX:123211830 synonymous SNV . 0 36 hPsi_associated_SNPs_1074 0 0 1 0 2 Nucleus 1 0.457080260043933 0.0406119823455819 1 hPsi_site_7684 iPseU_CNN:0.0406119823455819;iRNA_PseU:1 7685 chr16 90001986 90001986 1 + A G LUAD 90001991 + 90001971 90002011 41 GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAG GCACGGCCATCCAGGGGCTGTTCAAGCGCATCTCCGAGCAG < 41bp 1 0.686429059486518 1 0.482570886611938 experiment 0.627141881026963 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001991 chr16:90001986 nonsynonymous SNV 1.000 5 16 hPsi_associated_SNPs_1075 0 0 0 0 0 chromatin 1 0.451095809696999 1 1 hPsi_site_7685 iPseU_CNN:1;iRNA_PseU:1 7686 chr1 981164 981164 1 + C T LUAD 981180 + 981160 981200 41 ATGACGGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC ATGATGGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC < 41bp 1 0.562971104650412 1 0.99912303686142 experiment 0.874057790699176 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide AGRN ENSG00000188157 CDS Human protein_coding chr1:981180 chr1:981164 nonsynonymous SNV 0.742 3 5 hPsi_associated_SNPs_1076 0 0 1 0 2 Endoplasmic reticulum 1 0.442844306879686 0.00175392627715998 1 hPsi_site_7686 iPseU_CNN:0.00175392627715998;iRNA_PseU:1 7687 chrX 100402979 100402979 1 + T A LUAD 100402974 + 100402954 100402994 41 GCAGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA GCAGCAAGACTTATCAAGAATTTAAACACTATTTGACATCA < 41bp 1 0.436684577142087 1 0.990203320980072 experiment 1 Functional Loss NA| CENPI ENSG00000102384 CDS Human protein_coding chrX:100402974 chrX:100402979 nonsynonymous SNV 0.893 4 26 hPsi_associated_SNPs_1077 0 0 1 0 1 Nucleus 1 0.788791858792298 0.019593358039856 0.422416282415403 hPsi_site_7687 iPseU_CNN:0.019593358039856;iRNA_PseU:0.422416282415403 7688 chr6 17543168 17543168 1 + G C LUAD 17543174 + 17543154 17543194 41 TATTCAGATAAAAGGGAAAGTAAACTCCATTATAATTGGTA TATTCAGATAAAAGCGAAAGTAAACTCCATTATAATTGGTA < 41bp 1 0.516158440419961 1 0.299623608589172 experiment 0.967683119160079 Functional Loss NA| CAP2 ENSG00000112186 CDS Human protein_coding chr6:17543174 chr6:17543168 nonsynonymous SNV 0.973 4 15 hPsi_associated_SNPs_1079 0 0 1 4 1 exosome 1 0.438781247172069 1 1 hPsi_site_7688 iPseU_CNN:1;iRNA_PseU:1 7689 chr17 78085838 78085838 1 + C T LUAD 78085836 + 78085816 78085856 41 CTGTGCCTCCAGCCACCAGTTTCTCTCCACACACTACAACC CTGTGCCTCCAGCCACCAGTTTTTCTCCACACACTACAACC < 41bp 1 0.520746178242937 1 0.487611651420593 experiment 0.958507643514127 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78085836 chr17:78085838 nonsynonymous SNV 0.971 3 23 hPsi_associated_SNPs_1080 0 0 1 0 2 Endoplasmic reticulum 1 0.438725730759171 1 1 hPsi_site_7689 iPseU_CNN:1;iRNA_PseU:1 7690 chr17 59024676 59024676 1 + A T LUAD 59024683 + 59024663 59024703 41 TGTGCTGTCCACCATCTGTATACTCTTCACAGGGGAGAAAC TGTGCTGTCCACCTTCTGTATACTCTTCACAGGGGAGAAAC < 41bp 1 0.386570465976031 1 0.996646285057068 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59024683 chr17:59024676 nonsynonymous SNV 0.998 4 14 hPsi_associated_SNPs_1081 0 0 1 0 2 Cytosol 1 0.891857660015653 0.00670742988586404 0.216284679968694 hPsi_site_7690 iPseU_CNN:0.00670742988586404;iRNA_PseU:0.216284679968694 7691 chr4 123192444 123192444 1 + C T LUAD 123192452 + 123192432 123192472 41 ATCAAAGCAACTCAGACTGATATTAAACTTAGCAGATATAC ATCAAAGCAACTTAGACTGATATTAAACTTAGCAGATATAC < 41bp 1 0.387813672466214 1 0.979836106300354 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123192452 chr4:123192444 stopgain 0.994 1 13 hPsi_associated_SNPs_1082 0 0 1 0 0 Nucleus 1 0.531649509471673 0.040327787399292 0.936700981056654 hPsi_site_7691 iPseU_CNN:0.040327787399292;iRNA_PseU:0.936700981056654 7692 chr5 76029085 76029085 1 + C A LUAD 76029101 + 76029081 76029121 41 CCACCACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC CCACAACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC < 41bp 1 0.290160553017137 1 0.987715482711792 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control F2R ENSG00000181104 CDS Human protein_coding chr5:76029101 chr5:76029085 synonymous SNV . 0 5 hPsi_associated_SNPs_1083 0 0 1 0 0 Endoplasmic reticulum 1 0.531093475862626 0.024569034576416 0.937813048274747 hPsi_site_7692 iPseU_CNN:0.024569034576416;iRNA_PseU:0.937813048274747 7693 chr17 58024113 58024113 1 + C T LUAD 58024103 + 58024083 58024123 41 GCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGC GCCATACAAAAAACAAGCTTTTCCCATGATTTCCAAACGGC < 41bp 1 0.146964964468855 1 0.336228340864182 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58024103 chr17:58024113 synonymous SNV . 0 31 hPsi_associated_SNPs_1084 0 0 0 0 0 Ribosome 1 0.438720708079188 1 1 hPsi_site_7693 iPseU_CNN:1;iRNA_PseU:1 7694 chr5 162900425 162900425 1 + G T LUAD 162900423 + 162900403 162900443 41 GGAAAAATACAAGCTAGATATTGCCCAGTTAGAAGAAAATT GGAAAAATACAAGCTAGATATTTCCCAGTTAGAAGAAAATT < 41bp 1 0.413185416565621 1 0.989706516265869 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HMMR ENSG00000072571 CDS Human protein_coding chr5:162900423 chr5:162900425 nonsynonymous SNV 0.990 1 23 hPsi_associated_SNPs_1085 0 0 1 0 1 Cytosol 1 0.444323462564286 0.0205869674682619 1 hPsi_site_7694 iPseU_CNN:0.0205869674682619;iRNA_PseU:1 7695 chr11 126143255 126143255 1 + C T LUAD 126143274 + 126143254 126143294 41 TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT TTCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT < 41bp 1 0.559967497629679 1 0.999889969825745 experiment 0.880065004740641 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143274 chr11:126143255 nonsynonymous SNV 0.042 0 2 hPsi_associated_SNPs_1086 0 0 1 0 3 Ribosome 1 0.438724227357707 0.000220060348510076 1 hPsi_site_7695 iPseU_CNN:0.000220060348510076;iRNA_PseU:1 7696 chr8 28575146 28575146 1 + G A LUAD 28575142 + 28575122 28575162 41 TGGGAGACTTACTTCTCCACTGCTGACAGTATTTTTAATAC TGGGAGACTTACTTCTCCACTGCTAACAGTATTTTTAATAC < 41bp 1 0.198147445292344 1 0.984179317951202 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575142 chr8:28575146 nonsynonymous SNV 0.997 2 25 hPsi_associated_SNPs_1087 0 0 1 0 0 Endoplasmic reticulum 1 0.44108898067704 0.0316413640975961 1 hPsi_site_7696 iPseU_CNN:0.0316413640975961;iRNA_PseU:1 7697 chr1 230371793 230371793 1 + G T LUAD 230371783 + 230371763 230371803 41 TCAGCGGAAGCAGTGGCGGGTGGATCTGCCGGCCACCAGCG TCAGCGGAAGCAGTGGCGGGTGGATCTGCCTGCCACCAGCG < 41bp 1 0.404272524194368 1 0.996042847633362 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371783 chr1:230371793 synonymous SNV . 0 31 hPsi_associated_SNPs_1090 0 0 1 0 2 Endoplasmic reticulum 1 0.438839505343383 0.00791430473327592 1 hPsi_site_7697 iPseU_CNN:0.00791430473327592;iRNA_PseU:1 7698 chr2 198570480 198570480 1 + C G LUAD 198570483 + 198570463 198570503 41 GAGCTGTGCGACCGAGTCTCTGAGCAGTTCCAGCAGCTTTT GAGCTGTGCGACCGAGTGTCTGAGCAGTTCCAGCAGCTTTT < 41bp 1 0.0915082027319162 1 0.252850532531738 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570483 chr2:198570480 synonymous SNV . 0 18 hPsi_associated_SNPs_1091 0 0 1 0 0 Ribosome 1 0.440415699825521 1 1 hPsi_site_7698 iPseU_CNN:1;iRNA_PseU:1 7699 chr6 71566579 71566579 1 + A G LUAD 71566597 + 71566577 71566617 41 CCAGCAGCTGCAACCCTGTCTACAGTAACATCTGGGGATCT CCGGCAGCTGCAACCCTGTCTACAGTAACATCTGGGGATCT < 41bp 1 0.549027773931533 1 0.979631960391998 experiment 0.901944452136935 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71566597 chr6:71566579 synonymous SNV . 0 3 hPsi_associated_SNPs_1092 0 0 1 0 1 chromatin 1 0.438718593207495 0.0407360792160041 1 hPsi_site_7699 iPseU_CNN:0.0407360792160041;iRNA_PseU:1 7700 chr17 38140601 38140601 1 + G A LUAD 38140603 + 38140583 38140623 41 TTTCAGGCAAGGAGCCGAGATTCGTGCTGCGGGCCCTGCGG TTTCAGGCAAGGAGCCGAAATTCGTGCTGCGGGCCCTGCGG < 41bp 1 0.695102428179298 1 0.717845678329468 experiment 0.609795143641404 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38140603 chr17:38140601 nonsynonymous SNV 0.982 4 19 hPsi_associated_SNPs_1093 0 0 1 0 1 Ribosome 1 0.438720745309283 0.564308643341064 1 hPsi_site_7700 iPseU_CNN:0.564308643341064;iRNA_PseU:1 7701 chr19 36220984 36220984 1 + G C LUAD 36220991 + 36220971 36221011 41 TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT TCCAGGATGACAACAAAGTCTTCTGCCAGAAACACACTGAT < 41bp 1 0.684784398155233 1 0.997400760650635 experiment 0.630431203689535 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36220991 chr19:36220984 nonsynonymous SNV 0.999 4 14 hPsi_associated_SNPs_1094 0 0 1 0 1 chromatin 1 0.43862512959787 0.00519847869873002 1 hPsi_site_7701 iPseU_CNN:0.00519847869873002;iRNA_PseU:1 7702 chr10 102763815 102763815 1 + G T LUAD 102763812 + 102763792 102763832 41 CCACCCCCGCCTCCACCTCCTTCGGATGAGGCCCTGCTGCA CCACCCCCGCCTCCACCTCCTTCTGATGAGGCCCTGCTGCA < 41bp 1 0.412310432129672 1 0.980566561222076 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763812 chr10:102763815 synonymous SNV . 0 24 hPsi_associated_SNPs_1095 0 0 1 0 0 Ribosome 1 0.438719623954825 0.0388668775558481 1 hPsi_site_7702 iPseU_CNN:0.0388668775558481;iRNA_PseU:1 7703 chr11 134109999 134109999 1 + G T LUAD 134110008 + 134109988 134110028 41 ATCAAGATGGAGGTTGGGATTGAGGACTGTCTGCACATTGA ATCAAGATGGATGTTGGGATTGAGGACTGTCTGCACATTGA < 41bp 1 0.28269508966609 1 0.999326348304749 experiment 1 Functional Loss NA| VPS26B ENSG00000151502 CDS Human protein_coding chr11:134110008 chr11:134109999 nonsynonymous SNV 0.998 3 12 hPsi_associated_SNPs_1096 0 0 1 0 1 Ribosome 1 0.439131079089544 0.00134730339050204 1 hPsi_site_7703 iPseU_CNN:0.00134730339050204;iRNA_PseU:1 7704 chrX 154282908 154282908 1 + G T LUAD 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGTGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.405659359745207 1 0.993662714958191 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282908 synonymous SNV . 0 5 hPsi_associated_SNPs_1097 0 0 1 0 1 Ribosome 1 0.438718592995526 0.0126745700836179 1 hPsi_site_7704 iPseU_CNN:0.0126745700836179;iRNA_PseU:1 7705 chr2 220366640 220366640 1 + G T LUAD 220366621 + 220366601 220366641 41 ACAGGGGGTGGTCTTTACCATTTTCGAGACCAGATCCTGGC ACAGGGGGTGGTCTTTACCATTTTCGAGACCAGATCCTGTC < 41bp 1 0.412414020733816 1 0.987784147262573 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366621 chr2:220366640 nonsynonymous SNV 0.991 1 40 hPsi_associated_SNPs_1098 0 0 1 0 1 Ribosome 1 0.445748157388028 0.024431705474854 1 hPsi_site_7705 iPseU_CNN:0.024431705474854;iRNA_PseU:1 Bruck syndrome 1 Bruck syndrome 1 7706 chr2 132276182 132276182 1 + G T LUAD 132276198 + 132276178 132276218 41 CAGCGGTCACTGATGCCTCCTTCAAGGTGAAGAGCCACGTC CAGCTGTCACTGATGCCTCCTTCAAGGTGAAGAGCCACGTC < 41bp 1 0.274059465731375 1 0.999616682529449 experiment 1 Functional Loss NA| LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132276198 chr2:132276182 . . 0 5 hPsi_associated_SNPs_1099 0 0 0 0 1 unknown 1 0.438534408930114 0.000766634941101962 1 hPsi_site_7706 iPseU_CNN:0.000766634941101962;iRNA_PseU:1 7707 chr3 160945076 160945076 1 + A T LUAD 160945072 + 160945052 160945092 41 GAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT GAACTTGGATACAGTGTGCTTTAGTATCCAGGGAACTTCTT < 41bp 1 0.426108986897248 1 0.0453238785266876 experiment 1 Functional Loss NA| NMD3 ENSG00000169251 CDS Human protein_coding chr3:160945072 chr3:160945076 nonsynonymous SNV 1.000 4 25 hPsi_associated_SNPs_1100 0 0 1 0 2 Nucleus 1 0.765739706780086 1 0.468520586439829 hPsi_site_7707 iPseU_CNN:1;iRNA_PseU:0.468520586439829 7708 chr2 233321707 233321707 1 + A T LUAD 233321719 + 233321699 233321739 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCTGCCGCCCGCTTTAACCAGTGCAACACGACACG < 41bp 1 0.553560533112888 1 0.997637033462524 experiment 0.892878933774224 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPI ENSG00000163295 CDS Human protein_coding chr2:233321719 chr2:233321707 synonymous SNV . 0 9 hPsi_associated_SNPs_1101 0 0 0 0 2 Cytosol 1 0.901295511783769 0.00472593307495206 0.197408976432461 hPsi_site_7708 iPseU_CNN:0.00472593307495206;iRNA_PseU:0.197408976432461 7709 chr9 124534959 124534959 1 + G T LUAD 124534939 + 124534919 124534959 41 CCCCGAAAACAAGGACTTGTTTTTTGTCACAAGGTCCTCCG CCCCGAAAACAAGGACTTGTTTTTTGTCACAAGGTCCTCCT < 41bp 1 0.529839842054721 1 0.996871113777161 experiment 0.940320315890558 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124534939 chr9:124534959 nonsynonymous SNV 1.000 2 41 hPsi_associated_SNPs_1102 0 0 1 0 2 Ribosome 1 0.440641266336933 0.00625777244567804 1 hPsi_site_7709 iPseU_CNN:0.00625777244567804;iRNA_PseU:1 7710 chr7 140396598 140396598 1 + C T LUAD 140396596 + 140396576 140396616 41 CTCGCGTTGGAGGCCGCCTTTTCAGAAGCGGCTGCGCACGG CTCGCGTTGGAGGCCGCCTTTTTAGAAGCGGCTGCGCACGG < 41bp 1 0.67576607400075 1 0.998933076858521 experiment 0.648467851998499 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140396596 chr7:140396598 synonymous SNV . 0 23 hPsi_associated_SNPs_1103 0 0 1 0 1 Ribosome 1 0.438718592886195 0.0021338462829581 1 hPsi_site_7710 iPseU_CNN:0.0021338462829581;iRNA_PseU:1 7711 chr3 141622499 141622499 1 + C T LUAD 141622489 + 141622469 141622509 41 CTTGCTCTTCTACCTAGTTTTTTATGGGTTCCTGGCTGCAC CTTGCTCTTCTACCTAGTTTTTTATGGGTTTCTGGCTGCAC < 41bp 1 0.395987402187109 1 0.855632603168488 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141622489 chr3:141622499 nonsynonymous SNV 0.998 1 31 hPsi_associated_SNPs_1104 0 0 1 3 2 Ribosome 1 0.438718570600327 0.288734793663024 1 hPsi_site_7711 iPseU_CNN:0.288734793663024;iRNA_PseU:1 7712 chrX 153994220 153994220 1 + A G LUAD 153994236 + 153994216 153994256 41 ATACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAG ATACGCCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAG < 41bp 1 0.37176957266036 1 0.99714720249176 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control DKC1 ENSG00000130826 CDS Human protein_coding chrX:153994236 chrX:153994220 synonymous SNV . 0 5 hPsi_associated_SNPs_1105 0 0 1 0 2 Cytosol 1 0.942742627551346 0.00570559501647994 0.114514744897309 hPsi_site_7712 iPseU_CNN:0.00570559501647994;iRNA_PseU:0.114514744897309 7713 chr1 981168 981168 1 + G A LUAD 981180 + 981160 981200 41 ATGACGGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC ATGACGGGACTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC < 41bp 1 0.45856283220844 1 0.999118983745575 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide AGRN ENSG00000188157 CDS Human protein_coding chr1:981180 chr1:981168 synonymous SNV . 0 9 hPsi_associated_SNPs_1106 0 0 1 0 2 Endoplasmic reticulum 1 0.530756361822526 0.0017620325088501 0.938487276354947 hPsi_site_7713 iPseU_CNN:0.0017620325088501;iRNA_PseU:0.938487276354947 7714 chr22 29695793 29695793 1 + A C LUAD 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGGCCCCCTGGACCTTTGATGGAACCGATGGGAGG < 41bp 1 0.253153669099744 1 0.998551607131958 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695793 nonsynonymous SNV 1.000 3 32 hPsi_associated_SNPs_1107 0 0 1 0 1 Cytosol 1 0.438731320172044 0.00289678573608398 1 hPsi_site_7714 iPseU_CNN:0.00289678573608398;iRNA_PseU:1 7715 chrX 119007299 119007299 1 + G C LUAD 119007286 + 119007266 119007306 41 GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGGAGTCTGA GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGCAGTCTGA < 41bp 1 0.348746328685025 1 0.949355006217957 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007286 chrX:119007299 nonsynonymous SNV 0.008 4 34 hPsi_associated_SNPs_1108 0 0 1 0 2 Ribosome 1 0.441827764756181 0.101289987564086 1 hPsi_site_7715 iPseU_CNN:0.101289987564086;iRNA_PseU:1 7716 chr12 98992439 98992439 1 + G T LUAD 98992435 + 98992415 98992455 41 AGCCAGGTTATGCCAACACTTTGAGGGATGCAGCTCCCAAA AGCCAGGTTATGCCAACACTTTGATGGATGCAGCTCCCAAA < 41bp 1 0.232012259907062 1 0.962215960025787 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992435 chr12:98992439 nonsynonymous SNV 0.994 1 25 hPsi_associated_SNPs_1109 0 0 1 0 0 Ribosome 1 0.438718591143756 0.075568079948426 1 hPsi_site_7716 iPseU_CNN:0.075568079948426;iRNA_PseU:1 7717 chr2 60998691 60998691 1 + T C LUAD 60998701 + 60998681 60998721 41 ATACAAACCATATCAGATAATTTAGATCTAAGAGACGACTC ATACAAACCACATCAGATAATTTAGATCTAAGAGACGACTC < 41bp 1 0.487289989850281 1 0.981813549995422 experiment 1 Functional Loss NA| PAPOLG ENSG00000115421 CDS Human protein_coding chr2:60998701 chr2:60998691 nonsynonymous SNV 1.000 3 11 hPsi_associated_SNPs_1110 0 0 1 0 2 chromatin 1 0.561672942446353 0.0363729000091559 0.876654115107294 hPsi_site_7717 iPseU_CNN:0.0363729000091559;iRNA_PseU:0.876654115107294 7718 chr5 82836404 82836404 1 + G C LUAD 82836401 + 82836381 82836421 41 TCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAA TCCAAGACCGTTTCAGGGAATTCCAGGATTCCACCTTAAAA < 41bp 1 0.216585005282468 1 0.998291730880737 experiment 1 Functional Loss NA| VCAN ENSG00000038427 CDS Human protein_coding chr5:82836401 chr5:82836404 nonsynonymous SNV 0.073 2 24 hPsi_associated_SNPs_1111 0 0 1 0 0 Ribosome 1 0.438718600122352 0.00341653823852606 1 hPsi_site_7718 iPseU_CNN:0.00341653823852606;iRNA_PseU:1 7719 chr1 156314422 156314422 1 + C T LUAD 156314408 + 156314388 156314428 41 GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCTCCCCCAG GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCTTCCCCAG < 41bp 1 0.382323642901717 1 0.999657869338989 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSACC ENSG00000163467 CDS Human protein_coding chr1:156314408 chr1:156314422 nonsynonymous SNV 0.978 4 35 hPsi_associated_SNPs_1112 0 0 0 0 2 chromatin 1 0.438718812754363 0.000684261322021928 1 hPsi_site_7719 iPseU_CNN:0.000684261322021928;iRNA_PseU:1 7720 chrX 100402993 100402993 1 + C T LUAD 100402974 + 100402954 100402994 41 GCAGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA GCAGCAAGACTTATCAAGAATTTAATCACTATTTGACATTA < 41bp 1 0.66688012541307 1 0.964271306991577 experiment 0.66623974917386 Functional Loss NA| CENPI ENSG00000102384 CDS Human protein_coding chrX:100402974 chrX:100402993 nonsynonymous SNV 0.946 1 40 hPsi_associated_SNPs_1113 0 0 1 0 1 Nucleus 1 0.60884017662005 0.0714573860168459 0.7823196467599 hPsi_site_7720 iPseU_CNN:0.0714573860168459;iRNA_PseU:0.7823196467599 7721 chr22 38273860 38273860 1 + G T LUAD 38273846 + 38273826 38273866 41 TCTATGAAGAACTTTTCAGTTACTCCTGCCCCAAGTTCCTG TCTATGAAGAACTTTTCAGTTACTCCTGCCCCAATTTCCTG < 41bp 1 0.480112548636108 1 0.992987990379333 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38273846 chr22:38273860 nonsynonymous SNV 0.998 4 35 hPsi_associated_SNPs_1114 0 0 1 0 0 Cytosol 1 0.43872053576942 0.0140240192413339 1 hPsi_site_7721 iPseU_CNN:0.0140240192413339;iRNA_PseU:1 7722 chr1 20964402 20964402 1 + G A LUAD 20964399 + 20964379 20964419 41 CACGAGACGCTTGCAGGGCTTTCGGCTGGAGGAGTATCTGA CACGAGACGCTTGCAGGGCTTTCAGCTGGAGGAGTATCTGA < 41bp 1 0.624326636945075 1 0.932265222072601 experiment 0.751346726109851 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PINK1 ENSG00000158828 CDS Human protein_coding chr1:20964399 chr1:20964402 nonsynonymous SNV 0.997 0 24 hPsi_associated_SNPs_1115 0 0 1 0 1 Ribosome 1 0.438718817514792 0.135469555854798 1 hPsi_site_7722 iPseU_CNN:0.135469555854798;iRNA_PseU:1 7723 chr19 19453457 19453457 1 + G A LUAD 19453446 + 19453426 19453466 41 CCAGCAACCCCGCTGACCTCTTCCACTGGCTGCCCAAGGAG CCAGCAACCCCGCTGACCTCTTCCACTGGCTACCCAAGGAG < 41bp 1 0.539458868174669 1 0.939907491207123 experiment 0.921082263650661 Functional Loss NA| MAU2 ENSG00000129933 CDS Human protein_coding chr19:19453446 chr19:19453457 synonymous SNV . 0 32 hPsi_associated_SNPs_1116 0 0 1 0 1 Nucleus 1 0.681455113374915 0.120185017585754 0.637089773250171 hPsi_site_7723 iPseU_CNN:0.120185017585754;iRNA_PseU:0.637089773250171 7724 chr5 76029084 76029084 1 + C A LUAD 76029101 + 76029081 76029121 41 CCACCACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC CCAACACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC < 41bp 1 0.406344180875278 1 0.995196282863617 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control F2R ENSG00000181104 CDS Human protein_coding chr5:76029101 chr5:76029084 nonsynonymous SNV 0.001 0 4 hPsi_associated_SNPs_1117 0 0 1 0 0 Endoplasmic reticulum 1 0.439025065756279 0.00960743427276589 1 hPsi_site_7724 iPseU_CNN:0.00960743427276589;iRNA_PseU:1 7725 chr1 227169734 227169734 1 + A C LUAD 227169748 + 227169728 227169768 41 GGAAGAAGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAG GGAAGACGGCCGTGCTGGGTTCCAGTCCTTTCCTGTCCGAG < 41bp 1 0.685761677599815 1 0.999999821186066 experiment 0.62847664480037 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control COQ8A ENSG00000163050 CDS Human protein_coding chr1:227169748 chr1:227169734 nonsynonymous SNV 0.310 1 7 hPsi_associated_SNPs_1118 0 0 1 0 1 Nucleus 1 0.438783004773911 3.5762786798621e-07 1 hPsi_site_7725 iPseU_CNN:3.5762786798621e-07;iRNA_PseU:1 7726 chr12 2997491 2997491 1 + G T LUAD 2997498 + 2997478 2997518 41 TAGCCCAGAGCCTGGACCTGTTCTGGTTAAAGACACCCCCG TAGCCCAGAGCCTTGACCTGTTCTGGTTAAAGACACCCCCG < 41bp 1 0.329774984895673 1 0.999723672866821 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RHNO1 ENSG00000171792 CDS Human protein_coding chr12:2997498 chr12:2997491 stopgain 0.892 0 14 hPsi_associated_SNPs_1119 0 0 1 0 0 Cytosol 1 0.451727305779064 0.000552654266358088 1 hPsi_site_7726 iPseU_CNN:0.000552654266358088;iRNA_PseU:1 7727 chr13 98672029 98672029 1 + C A LUAD 98672041 + 98672021 98672061 41 AAGCTGTTCAGACTTTCAATTATCTGTGTGACCTGATTGAA AAGCTGTTAAGACTTTCAATTATCTGTGTGACCTGATTGAA < 41bp 1 0.416700196662515 1 0.975780248641968 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control IPO5 ENSG00000065150 CDS Human protein_coding chr13:98672041 chr13:98672029 nonsynonymous SNV 0.999 2 9 hPsi_associated_SNPs_1120 0 0 1 0 1 Ribosome 1 0.655312440033228 0.048439502716064 0.689375119933545 hPsi_site_7727 iPseU_CNN:0.048439502716064;iRNA_PseU:0.689375119933545 7728 chr15 91496492 91496492 1 + C T LUAD 91496497 + 91496477 91496517 41 TGCCGGGGGCTTGGCCATGCTTACCTCCATGCGGCCCACGC TGCCGGGGGCTTGGCTATGCTTACCTCCATGCGGCCCACGC < 41bp 1 0.442838408641965 1 0.999916195869446 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNC45A ENSG00000140553 CDS Human protein_coding chr15:91496497 chr15:91496492 synonymous SNV . 0 16 hPsi_associated_SNPs_1121 0 0 1 0 1 Nucleus 1 0.438718592952592 0.000167608261107954 1 hPsi_site_7728 iPseU_CNN:0.000167608261107954;iRNA_PseU:1 7729 chr16 14989374 14989374 1 + A T LUAD 14989392 + 14989372 14989412 41 TCATTCCTTTGCTGCTGCAGTTGACAAGCCGGCTACAGGGA TCTTTCCTTTGCTGCTGCAGTTGACAAGCCGGCTACAGGGA < 41bp 1 0.040289543248254 1 0.999167561531067 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14989392 chr16:14989374 nonsynonymous SNV 0.989 1 3 hPsi_associated_SNPs_1122 0 0 1 0 1 Nucleus 1 0.440414513802655 0.00166487693786599 1 hPsi_site_7729 iPseU_CNN:0.00166487693786599;iRNA_PseU:1 7730 chr2 73446058 73446058 1 + G T LUAD 73446068 + 73446048 73446088 41 GCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATC GCCCCTGGTGTCTGCACAGTTTCTCTGGAATGCACTTTATC < 41bp 1 0.0745726162263487 1 0.985793352127075 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73446068 chr2:73446058 nonsynonymous SNV 0.998 1 11 hPsi_associated_SNPs_1123 0 0 1 0 2 Ribosome 1 0.457621766540998 0.0284132957458501 1 hPsi_site_7730 iPseU_CNN:0.0284132957458501;iRNA_PseU:1 7731 chr6 1390753 1390753 1 + C T LUAD 1390747 + 1390727 1390767 41 TCATGTTCGAGGAGGGCTCGTTCCGCCGCCGGCCGCGCGGC TCATGTTCGAGGAGGGCTCGTTCCGCTGCCGGCCGCGCGGC < 41bp 1 0.319544859628791 1 0.999535083770752 experiment 1 Functional Loss NA| FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390747 chr6:1390753 nonsynonymous SNV 0.824 4 27 hPsi_associated_SNPs_1124 0 0 0 0 0 exosome 1 0.438211820421375 0.000929832458496094 1 hPsi_site_7731 iPseU_CNN:0.000929832458496094;iRNA_PseU:1 7732 chr2 241536200 241536200 1 + G T LUAD 241536219 + 241536199 241536239 41 CGGCGGGGGGCAGCAGGAACTTTGCCTCATACCCCACCAAC CTGCGGGGGGCAGCAGGAACTTTGCCTCATACCCCACCAAC < 41bp 1 0.453322157646708 1 0.994512438774109 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241536219 chr2:241536200 synonymous SNV . 0 2 hPsi_associated_SNPs_1125 0 0 0 0 0 cytosol 1 0.438788527599694 0.010975122451782 1 hPsi_site_7732 iPseU_CNN:0.010975122451782;iRNA_PseU:1 7733 chr12 7046411 7046411 1 + T G LUSC 7046399 + 7046379 7046419 41 AGACAGCCACCCCACCCGGATACAAACCCGGGTCGCCTCCC AGACAGCCACCCCACCCGGATACAAACCCGGGGCGCCTCCC < 41bp 1 0.457340994705168 1 0.999998986721039 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATN1 ENSG00000111676 CDS Human protein_coding chr12:7046399 chr12:7046411 nonsynonymous SNV 0.004 1 33 hPsi_associated_SNPs_1126 0 0 1 0 0 Endoplasmic reticulum 1 0.438754119316024 2.02655792191919e-06 1 hPsi_site_7733 iPseU_CNN:2.02655792191919e-06;iRNA_PseU:1 7734 chr7 92905554 92905554 1 + G T LUSC 92905541 + 92905521 92905561 41 CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTTGAACTAT < 41bp 1 0.0456697413754698 1 0.999704360961914 experiment 1 Functional Loss NA| VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905541 chr7:92905554 synonymous SNV . 0 34 hPsi_associated_SNPs_1127 0 0 1 0 2 Cytosol 1 0.439303568439105 0.000591278076172097 1 hPsi_site_7734 iPseU_CNN:0.000591278076172097;iRNA_PseU:1 7735 chr2 32667445 32667445 1 + A G LUSC 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA GCATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA < 41bp 1 0.0820394608629893 1 0.998121082782745 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667445 nonsynonymous SNV 0.998 1 1 hPsi_associated_SNPs_1128 0 0 1 0 2 Nucleus 1 0.728679492960672 0.00375783443450994 0.542641014078656 hPsi_site_7735 iPseU_CNN:0.00375783443450994;iRNA_PseU:0.542641014078656 7736 chr17 42429094 42429094 1 + C T LUSC 42429075 + 42429055 42429095 41 ACAAGCCTTGAAGAGAGATGTCCCCTGTGATAATGTCAGCA ACAAGCCTTGAAGAGAGATGTCCCCTGTGATAATGTCAGTA < 41bp 1 0.0304678728707367 1 0.968364059925079 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42429075 chr17:42429094 synonymous SNV . 0 40 hPsi_associated_SNPs_1129 0 0 1 0 1 Endoplasmic reticulum 1 0.46812174134491 0.063271880149842 1 hPsi_site_7736 iPseU_CNN:0.063271880149842;iRNA_PseU:1 7737 chr17 7611312 7611312 1 + G A LUSC 7611309 + 7611289 7611329 41 GGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAGA GGTGGTTATGTGCTGTACCCTCAAATCGGGGACCGGCTAGA < 41bp 1 0.0390745522407992 1 0.925151586532593 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611309 chr17:7611312 synonymous SNV . 0 24 hPsi_associated_SNPs_1130 0 0 1 0 1 exosome 1 0.438699426675149 0.149696826934814 1 hPsi_site_7737 iPseU_CNN:0.149696826934814;iRNA_PseU:1 7738 chr11 65268744 65268744 1 + C T LUSC 65268752 + 65268732 65268772 41 AGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAA AGTTCTTTTTCCTTTAGGTCTGTCTAGAATCCTAAAGGCAA < 41bp 1 0.125863716026186 1 0.985268950462341 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268752 chr11:65268744 . . 0 13 hPsi_associated_SNPs_1131 0 0 1 1 0 unknown 1 0.444224441451407 0.029462099075318 1 hPsi_site_7738 iPseU_CNN:0.029462099075318;iRNA_PseU:1 7739 chrX 119739315 119739315 1 + T C LUSC 119739324 + 119739304 119739344 41 AACTTCAGTTATTAAGGGTATTAAGAATCAATTGATAGAGC AACTTCAGTTACTAAGGGTATTAAGAATCAATTGATAGAGC < 41bp 1 0.262560869646414 1 0.972793221473694 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MCTS1 ENSG00000232119 CDS Human protein_coding chrX:119739324 chrX:119739315 nonsynonymous SNV 1.000 1 12 hPsi_associated_SNPs_1132 0 0 1 0 2 Cytosol 1 0.735924105441011 0.0544135570526121 0.528151789117978 hPsi_site_7739 iPseU_CNN:0.0544135570526121;iRNA_PseU:0.528151789117978 7740 chr19 45494594 45494594 1 + G T LUSC 45494610 + 45494590 45494630 41 CCTGGGTGCTCAGCATGCTCTACGGCTTCCTGCTGACCTTC CCTGTGTGCTCAGCATGCTCTACGGCTTCCTGCTGACCTTC < 41bp 1 0.29401228515403 1 0.992389678955078 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45494610 chr19:45494594 nonsynonymous SNV 1.000 4 5 hPsi_associated_SNPs_1133 0 0 1 0 2 Cytosol 1 0.438717774555946 0.015220642089844 1 hPsi_site_7740 iPseU_CNN:0.015220642089844;iRNA_PseU:1 7741 chr6 122720903 122720903 1 + G T LUSC 122720923 + 122720903 122720943 41 GCCGGCTTTCCTCAGCAAGCTGTGGACGCTTGTGGAGGAAA TCCGGCTTTCCTCAGCAAGCTGTGGACGCTTGTGGAGGAAA < 41bp 1 0.111207591625369 1 0.999517917633057 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HSF2 ENSG00000025156 CDS Human protein_coding chr6:122720923 chr6:122720903 synonymous SNV . 0 1 hPsi_associated_SNPs_1134 0 0 1 0 1 Cytosol 1 0.624946559410497 0.000964164733886053 0.750106881179006 hPsi_site_7741 iPseU_CNN:0.000964164733886053;iRNA_PseU:0.750106881179006 7742 chr7 100470832 100470832 1 + G C LUSC 100470817 + 100470797 100470837 41 TGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCTG TGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCACGGCTG < 41bp 1 0.105772746070324 1 0.700998902320862 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470817 chr7:100470832 nonsynonymous SNV 0.999 2 36 hPsi_associated_SNPs_1135 0 0 1 0 1 Ribosome 1 0.440407649775993 0.598002195358276 1 hPsi_site_7742 iPseU_CNN:0.598002195358276;iRNA_PseU:1 7743 chr10 126655279 126655279 1 + G A LUSC 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATATTGGCTA < 41bp 1 0.249876609046465 1 0.999667406082153 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655279 nonsynonymous SNV 0.999 0 34 hPsi_associated_SNPs_1136 0 0 1 0 1 Ribosome 1 0.907481976234233 0.000665187835694026 0.185036047531535 hPsi_site_7743 iPseU_CNN:0.000665187835694026;iRNA_PseU:0.185036047531535 7744 chr6 1390751 1390751 1 + G T LUSC 1390747 + 1390727 1390767 41 TCATGTTCGAGGAGGGCTCGTTCCGCCGCCGGCCGCGCGGC TCATGTTCGAGGAGGGCTCGTTCCTCCGCCGGCCGCGCGGC < 41bp 1 0.300878402704953 1 0.999753952026367 experiment 1 Functional Loss NA| FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390747 chr6:1390751 nonsynonymous SNV 0.798 3 25 hPsi_associated_SNPs_1137 0 0 0 0 0 exosome 1 0.442608835821921 0.000492095947266069 1 hPsi_site_7744 iPseU_CNN:0.000492095947266069;iRNA_PseU:1 7745 chrX 47100995 47100995 1 + A T LUSC 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATGACTCTCTGGAGCTGCTGTCATTCCTCCTGGACGGGCTG < 41bp 1 0.0671101927412858 1 0.644967436790466 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47100995 nonsynonymous SNV 0.998 4 10 hPsi_associated_SNPs_1138 0 0 1 0 1 cytosol 1 0.851484761519882 0.710065126419068 0.297030476960235 hPsi_site_7745 iPseU_CNN:0.710065126419068;iRNA_PseU:0.297030476960235 7746 chr5 82836389 82836389 1 + C G LUSC 82836401 + 82836381 82836421 41 TCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAA TCCAAGACGGTTTCAGGGAATTCGAGGATTCCACCTTAAAA < 41bp 1 0.121626001641157 1 0.999952018260956 experiment 1 Functional Loss NA| VCAN ENSG00000038427 CDS Human protein_coding chr5:82836401 chr5:82836389 nonsynonymous SNV 0.030 0 9 hPsi_associated_SNPs_1139 0 0 1 0 0 Ribosome 1 0.438849074092901 9.59634780879348e-05 1 hPsi_site_7746 iPseU_CNN:9.59634780879348e-05;iRNA_PseU:1 7747 chr19 14561819 14561819 1 + G A LUSC 14561814 + 14561794 14561834 41 CCACCCCAAGGGGCGGCTGCTGCGAGAAGAGCTCGCTGCGG CCACCCCAAGGGGCGGCTGCTGCGAAAAGAGCTCGCTGCGG < 41bp 1 0.0686496081307801 1 0.993736267089844 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561814 chr19:14561819 nonsynonymous SNV 0.694 2 26 hPsi_associated_SNPs_1140 0 0 1 0 0 Ribosome 1 0.438718587595136 0.0125274658203121 1 hPsi_site_7747 iPseU_CNN:0.0125274658203121;iRNA_PseU:1 7748 chr12 16043556 16043556 1 + G T LUSC 16043571 + 16043551 16043591 41 CGGGGGACAGGATAAACTGTTACGCATATATGACTTGAACA CGGGGTACAGGATAAACTGTTACGCATATATGACTTGAACA < 41bp 1 0.29955047270555 1 0.975310921669006 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STRAP ENSG00000023734 CDS Human protein_coding chr12:16043571 chr12:16043556 nonsynonymous SNV 1.000 4 6 hPsi_associated_SNPs_1141 0 0 1 0 2 Ribosome 1 0.439644356500734 0.049378156661988 1 hPsi_site_7748 iPseU_CNN:0.049378156661988;iRNA_PseU:1 7749 chr2 179365798 179365798 1 + T A LUSC 179365814 + 179365794 179365834 41 CCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTCT CCACACTATAAAAGAACCAGTATCTACACTTCACCGACTCT < 41bp 1 0.18994094825853 1 0.998076558113098 experiment 1 Functional Loss NA| PLEKHA3 ENSG00000116095 CDS Human protein_coding chr2:179365814 chr2:179365798 nonsynonymous SNV 0.065 0 5 hPsi_associated_SNPs_1142 0 0 1 0 1 Ribosome 1 0.917607871718693 0.00384688377380393 0.164784256562613 hPsi_site_7749 iPseU_CNN:0.00384688377380393;iRNA_PseU:0.164784256562613 7750 chr7 142962226 142962226 1 + A G LUSC 142962241 + 142962221 142962261 41 CTTGGATGACTTTCTGACCTTCCCCAGGCACGTTTTCAGGG CTTGGGTGACTTTCTGACCTTCCCCAGGCACGTTTTCAGGG < 41bp 1 0.0764640650445711 1 0.920979142189026 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962241 chr7:142962226 nonsynonymous SNV 0.001 1 6 hPsi_associated_SNPs_1143 0 0 1 0 1 Endoplasmic reticulum 1 0.440379169640117 0.158041715621948 1 hPsi_site_7750 iPseU_CNN:0.158041715621948;iRNA_PseU:1 7751 chr6 44394264 44394264 1 + A G LUSC 44394271 + 44394251 44394291 41 AGAACCGCCTTTAACAGATTTACAGAAAAGTGAAGAACTAA AGAACCGCCTTTAGCAGATTTACAGAAAAGTGAAGAACTAA < 41bp 1 0.354195854277451 1 0.815364003181458 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CDC5L ENSG00000096401 CDS Human protein_coding chr6:44394271 chr6:44394264 nonsynonymous SNV 1.000 1 14 hPsi_associated_SNPs_1144 0 0 1 0 1 Nucleus 1 0.502287751109674 0.369271993637084 0.995424497780651 hPsi_site_7751 iPseU_CNN:0.369271993637084;iRNA_PseU:0.995424497780651 7752 chr2 84518369 84518369 1 + G T LUSC 84518375 + 84518355 84518395 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCTGAGGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.246130539591936 1 0.991995632648468 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518375 chr2:84518369 . . 0 15 hPsi_associated_SNPs_1145 0 0 0 0 0 unknown 1 0.438718593556093 0.016008734703064 1 hPsi_site_7752 iPseU_CNN:0.016008734703064;iRNA_PseU:1 7753 chr2 84518389 84518389 1 + G T LUSC 84518375 + 84518355 84518395 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATTGCATCC < 41bp 1 0.244101552317543 1 0.793395400047302 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518375 chr2:84518389 . . 0 35 hPsi_associated_SNPs_1146 0 0 0 0 0 unknown 1 0.488980216618551 0.413209199905396 1 hPsi_site_7753 iPseU_CNN:0.413209199905396;iRNA_PseU:1 7754 chr2 84518390 84518390 1 + G T LUSC 84518375 + 84518355 84518395 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGTCATCC < 41bp 1 0.293682735889202 1 0.969324827194214 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518375 chr2:84518390 . . 0 36 hPsi_associated_SNPs_1147 0 0 0 0 0 unknown 1 0.439616607306062 0.061350345611572 1 hPsi_site_7754 iPseU_CNN:0.061350345611572;iRNA_PseU:1 7755 chr3 160945059 160945059 1 + G C LUSC 160945072 + 160945052 160945092 41 GAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT GAACTTGCATACAGTGTGCTTTAGAATCCAGGGAACTTCTT < 41bp 1 0.584786285635908 1 0.966429531574249 experiment 0.830427428728184 Functional Loss NA| NMD3 ENSG00000169251 CDS Human protein_coding chr3:160945072 chr3:160945059 nonsynonymous SNV 0.999 4 8 hPsi_associated_SNPs_1148 0 0 1 0 2 Nucleus 1 0.43857780571508 0.0671409368515019 1 hPsi_site_7755 iPseU_CNN:0.0671409368515019;iRNA_PseU:1 7756 chr7 66767802 66767802 1 + C T LUSC 66767817 + 66767797 66767837 41 TCCCACCTGCATGTACCGGCTCTCTAACGTGCAAGGCAGGA TCCCATCTGCATGTACCGGCTCTCTAACGTGCAAGGCAGGA < 41bp 1 0.309028229693494 1 0.999095320701599 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STAG3L4 ENSG00000067601;ENSG00000106610 ncRNA_exonic Human other chr7:66767817 chr7:66767802 . . 0 6 hPsi_associated_SNPs_1149 0 0 1 0 1 unknown 1 0.986602852715952 0.00180935859680198 0.0267942945680959 hPsi_site_7756 iPseU_CNN:0.00180935859680198;iRNA_PseU:0.0267942945680959 7757 chrX 100402956 100402956 1 + A T LUSC 100402974 + 100402954 100402994 41 GCAGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA GCTGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA < 41bp 1 0.54625516346528 1 0.99725067615509 experiment 0.907489673069441 Functional Loss NA| CENPI ENSG00000102384 CDS Human protein_coding chrX:100402974 chrX:100402956 nonsynonymous SNV 0.998 3 3 hPsi_associated_SNPs_1150 0 0 1 0 1 Nucleus 1 0.987446607305148 0.00549864768982 0.0251067853897049 hPsi_site_7757 iPseU_CNN:0.00549864768982;iRNA_PseU:0.0251067853897049 7758 chr5 43628327 43628327 1 + T A LUSC 43628322 + 43628302 43628342 41 AGCTGCAGCTTTGGAACAGTTCAAGTCTCTTGGTGCTGAGC AGCTGCAGCTTTGGAACAGTTCAAGACTCTTGGTGCTGAGC < 41bp 1 0.221524974003908 1 0.998318433761597 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43628322 chr5:43628327 nonsynonymous SNV 0.996 3 26 hPsi_associated_SNPs_1151 0 0 1 0 1 Endoplasmic reticulum 1 0.613335444847661 0.00336313247680597 0.773329110304679 hPsi_site_7758 iPseU_CNN:0.00336313247680597;iRNA_PseU:0.773329110304679 7759 chr8 145151959 145151959 1 + G C LUSC 145151971 + 145151951 145151991 41 ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTG ATGTCCCACATAGCCAAGGATGTGTGCACCTTCCTGCGCTG < 41bp 1 0.365023855955586 1 0.0422646105289459 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151971 chr8:145151959 nonsynonymous SNV 0.994 4 9 hPsi_associated_SNPs_1152 0 0 1 0 2 Ribosome 1 0.485315714331512 1 1 hPsi_site_7759 iPseU_CNN:1;iRNA_PseU:1 7760 chr5 76029116 76029116 1 + T C LUSC 76029101 + 76029081 76029121 41 CCACCACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC CCACCACAGAGGCTGCCTACTTTGCCTACCTCCTCCGTGTC < 41bp 1 0.486006770279284 1 0.980663895606995 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control F2R ENSG00000181104 CDS Human protein_coding chr5:76029101 chr5:76029116 nonsynonymous SNV 0.998 4 36 hPsi_associated_SNPs_1153 0 0 1 0 0 Endoplasmic reticulum 1 0.463063265361397 0.0386722087860101 1 hPsi_site_7760 iPseU_CNN:0.0386722087860101;iRNA_PseU:1 7761 chr21 38538495 38538495 1 + G A LUSC 38538499 + 38538479 38538519 41 TCCTTTCCAGAGATTTGATATCACCCAGACACCGCCAGCAT TCCTTTCCAGAGATTTAATATCACCCAGACACCGCCAGCAT < 41bp 1 0.442687885775345 1 0.460132360458374 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38538499 chr21:38538495 nonsynonymous SNV 0.873 1 17 hPsi_associated_SNPs_1154 0 0 1 0 0 Cytosol 1 0.439873810562574 1 1 hPsi_site_7761 iPseU_CNN:1;iRNA_PseU:1 7762 chr17 59024696 59024696 1 + G T LUSC 59024683 + 59024663 59024703 41 TGTGCTGTCCACCATCTGTATACTCTTCACAGGGGAGAAAC TGTGCTGTCCACCATCTGTATACTCTTCACAGGTGAGAAAC < 41bp 1 0.321550327921703 1 0.981859445571899 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59024683 chr17:59024696 stopgain 1.000 1 34 hPsi_associated_SNPs_1155 0 0 1 0 1 Cytosol 1 0.439458024203811 0.0362811088562021 1 hPsi_site_7762 iPseU_CNN:0.0362811088562021;iRNA_PseU:1 Nonsyndromic Hearing Loss, Recessive Nonsyndromic Hearing Loss, Recessive 7763 chr20 62658958 62658958 1 + G A LUSC 62658974 + 62658954 62658994 41 AGTTGAAGAAGTGTCCCCACTCCACACCCCTGTGGCTTTTG AGTTAAAGAAGTGTCCCCACTCCACACCCCTGTGGCTTTTG < 41bp 1 0.0505303631924803 1 0.999769270420074 experiment 1 Functional Loss NA| PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62658974 chr20:62658958 synonymous SNV . 0 5 hPsi_associated_SNPs_1157 0 0 0 0 1 Cytosol 1 0.438718592613892 0.000461459159851962 1 hPsi_site_7763 iPseU_CNN:0.000461459159851962;iRNA_PseU:1 7764 chr3 132226120 132226120 1 + A T LUSC 132226105 + 132226085 132226125 41 ATTGTGACAAAACTTATGGATCAGAATTTGTCTACAGTGAT ATTGTGACAAAACTTATGGATCAGAATTTGTCTACTGTGAT < 41bp 1 0.0437141346114209 1 0.972543120384216 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DNAJC13 ENSG00000138246 CDS Human protein_coding chr3:132226105 chr3:132226120 nonsynonymous SNV 0.997 2 36 hPsi_associated_SNPs_1158 0 0 1 0 1 Nucleus 1 0.989700128403203 0.054913759231568 0.0205997431935931 hPsi_site_7764 iPseU_CNN:0.054913759231568;iRNA_PseU:0.0205997431935931 7765 chr8 11683616 11683616 1 + T G LUSC 11683597 + 11683577 11683617 41 TCTTTTCTCAGCCTCAGAGTTTGAAGACCCCTTAGTTGGTG TCTTTTCTCAGCCTCAGAGTTTGAAGACCCCTTAGTTGGGG < 41bp 1 0.133457214513965 1 0.954419374465942 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683597 chr8:11683616 synonymous SNV . 0 40 hPsi_associated_SNPs_1159 0 0 1 2 2 Cytosol 1 0.438718592994667 0.0911612510681159 1 hPsi_site_7765 iPseU_CNN:0.0911612510681159;iRNA_PseU:1 7766 chr11 111753309 111753309 1 + C T LUSC 111753292 + 111753272 111753312 41 GAAAGATATGACCTGAGGAATATCGTGCAGCCCAAACCCTT GAAAGATATGACCTGAGGAATATCGTGCAGCCCAAACTCTT < 41bp 1 0.186163935570979 1 0.997113823890686 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C11orf1 ENSG00000137720 CDS Human protein_coding chr11:111753292 chr11:111753309 nonsynonymous SNV 0.996 4 38 hPsi_associated_SNPs_1160 0 0 1 0 1 Cytosol 1 0.440195923034097 0.00577235221862793 1 hPsi_site_7766 iPseU_CNN:0.00577235221862793;iRNA_PseU:1 7767 chr19 1495357 1495357 1 + C T LUSC 1495364 + 1495344 1495384 41 TGCTGTGCAATCTCATCGGATTTGTGTACCCCGCATATGCC TGCTGTGCAATCTTATCGGATTTGTGTACCCCGCATATGCC < 41bp 1 0.300598726638037 1 0.66452568769455 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control REEP6 ENSG00000115255 CDS Human protein_coding chr19:1495364 chr19:1495357 synonymous SNV . 0 14 hPsi_associated_SNPs_1161 0 0 1 0 2 Ribosome 1 0.43869880420752 0.6709486246109 1 hPsi_site_7767 iPseU_CNN:0.6709486246109;iRNA_PseU:1 7768 chr1 1387775 1387775 1 + C A LUSC 1387773 + 1387753 1387793 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTACGTGCCTTTGTGACAGAC < 41bp 1 0.143455840808345 1 0.996443092823029 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387773 chr1:1387775 nonsynonymous SNV 0.968 2 23 hPsi_associated_SNPs_1162 0 0 0 0 2 Nucleus 1 0.438718598355845 0.00711381435394198 1 hPsi_site_7768 iPseU_CNN:0.00711381435394198;iRNA_PseU:1 not specified not specified 7769 chr11 70266527 70266527 1 + G A LUSC 70266533 + 70266513 70266553 41 GAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGAC GAAAGGGTTTGGAGAAAAATTTGGTGTGCAGACAGACAGAC < 41bp 1 0.35898651707146 1 0.500820398330688 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock CTTN ENSG00000085733 CDS Human protein_coding chr11:70266533 chr11:70266527 nonsynonymous SNV 0.999 4 15 hPsi_associated_SNPs_1164 0 0 1 0 1 Ribosome 1 0.43857556880658 0.998359203338624 1 hPsi_site_7769 iPseU_CNN:0.998359203338624;iRNA_PseU:1 7770 chr15 31197396 31197396 1 + C T LUSC 31197401 + 31197381 31197421 41 AGGATGAAGAATTTGCCGGTTCTAGTCCACAGAGTTCCAAA AGGATGAAGAATTTGTCGGTTCTAGTCCACAGAGTTCCAAA < 41bp 1 0.422836535076196 1 0.999996244907379 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31197401 chr15:31197396 nonsynonymous SNV 0.104 0 16 hPsi_associated_SNPs_1165 0 0 1 0 0 Cytosol 1 0.74934456013557 7.51018524192126e-06 0.501310879728861 hPsi_site_7770 iPseU_CNN:7.51018524192126e-06;iRNA_PseU:0.501310879728861 not specified not specified 7771 chr11 65268757 65268757 1 + A T LUSC 65268752 + 65268732 65268772 41 AGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAA AGTTCTTTTTCCCTTAGGTCTGTCTTGAATCCTAAAGGCAA < 41bp 1 0.0783565553612572 1 0.865750193595886 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268752 chr11:65268757 . . 0 26 hPsi_associated_SNPs_1166 0 0 1 3 0 unknown 1 0.941521057774085 0.268499612808228 0.11695788445183 hPsi_site_7771 iPseU_CNN:0.268499612808228;iRNA_PseU:0.11695788445183 Cardiomyopathy, ARVC Cardiomyopathy, ARVC 7772 chr7 75933484 75933484 1 + C T LUSC 75933488 + 75933468 75933508 41 CCGATGAGACTGCCGCCAAGTAAAGCCTTAGCCCGGATGCC CCGATGAGACTGCCGCTAAGTAAAGCCTTAGCCCGGATGCC < 41bp 1 0.408959135324173 1 0.999937653541565 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933488 chr7:75933484 synonymous SNV . 0 17 hPsi_associated_SNPs_1167 0 0 1 0 0 Cytosol 1 0.438858601452531 0.000124692916869895 1 hPsi_site_7772 iPseU_CNN:0.000124692916869895;iRNA_PseU:1 7773 chr1 35824672 35824672 1 + G A LUSC 35824685 + 35824665 35824705 41 CTCTGGGGATCTTGCAGGAATTCCAGTCGTTGGTAGTGACA CTCTGGGAATCTTGCAGGAATTCCAGTCGTTGGTAGTGACA < 41bp 1 0.145934958463974 1 0.993116974830627 experiment 1 Functional Loss NA| ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824685 chr1:35824672 nonsynonymous SNV 1.000 0 8 hPsi_associated_SNPs_1168 0 0 1 0 0 Cytosol 1 0.440080195641493 0.013766050338746 1 hPsi_site_7773 iPseU_CNN:0.013766050338746;iRNA_PseU:1 7774 chr17 78079644 78079644 1 + G A LUSC 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCA < 41bp 1 0.316523123504218 1 0.997156977653503 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079644 nonsynonymous SNV 0.887 1 41 hPsi_associated_SNPs_1169 0 0 1 0 2 Endoplasmic reticulum 1 0.584564125813717 0.00568604469299405 0.830871748372566 hPsi_site_7774 iPseU_CNN:0.00568604469299405;iRNA_PseU:0.830871748372566 7775 chr19 10791697 10791697 1 + C T LUSC 10791716 + 10791696 10791736 41 ACGCACTGCGGCTCGCTGCCTTCGGCCAGCTCCATAAAGTC ATGCACTGCGGCTCGCTGCCTTCGGCCAGCTCCATAAAGTC < 41bp 1 0.659134368568894 1 0.997195959091187 experiment 0.681731262862212 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10791716 chr19:10791697 synonymous SNV . 0 2 hPsi_associated_SNPs_1170 0 0 1 0 1 Cytosol 1 0.993950308825722 0.00560808181762606 0.0120993823485558 hPsi_site_7775 iPseU_CNN:0.00560808181762606;iRNA_PseU:0.0120993823485558 7776 chr1 92769600 92769600 1 + G T LUSC 92769587 + 92769567 92769607 41 GTCGTGGATGAACGTTCTATTGTCAAACTCTGTGGTTATCC GTCGTGGATGAACGTTCTATTGTCAAACTCTGTTGTTATCC < 41bp 1 0.522529844758394 1 0.99934720993042 experiment 0.954940310483213 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769587 chr1:92769600 nonsynonymous SNV 0.997 3 34 hPsi_associated_SNPs_1172 0 0 1 0 2 Cytosol 1 0.438654187137448 0.00130558013915993 1 hPsi_site_7776 iPseU_CNN:0.00130558013915993;iRNA_PseU:1 7777 chr1 53493666 53493666 1 + G T LUSC 53493671 + 53493651 53493691 41 ACTCATCAAATTGAAGCTGTTCCAACCAGCTCTGCAAGTGA ACTCATCAAATTGAATCTGTTCCAACCAGCTCTGCAAGTGA < 41bp 1 0.612028148788028 1 0.984458088874817 experiment 0.775943702423944 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53493671 chr1:53493666 nonsynonymous SNV 0.639 2 16 hPsi_associated_SNPs_1173 0 0 1 0 3 Ribosome 1 0.438703848210423 0.031083822250366 1 hPsi_site_7777 iPseU_CNN:0.031083822250366;iRNA_PseU:1 7778 chrX 51644786 51644786 1 + G T LUSC 51644776 + 51644756 51644796 41 AGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG AGCAAGAACCCGCATGGGAATTGGAGATGATGCTGTGTCTG < 41bp 1 0.222587149940234 1 0.986529111862183 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644776 chrX:51644786 nonsynonymous SNV 1.000 4 31 hPsi_associated_SNPs_1174 0 0 1 0 0 chromatin 1 0.438760226411729 0.0269417762756341 1 hPsi_site_7778 iPseU_CNN:0.0269417762756341;iRNA_PseU:1 7779 chr12 32890064 32890064 1 + G A LUSC 32890082 + 32890062 32890102 41 CAGAGAATTACCTTCAGCTGTATCACGAGACAAGGTAAAAA CAAAGAATTACCTTCAGCTGTATCACGAGACAAGGTAAAAA < 41bp 1 0.285739282509341 1 0.990378379821777 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DNM1L ENSG00000087470 CDS Human protein_coding chr12:32890082 chr12:32890064 nonsynonymous SNV 1.000 0 3 hPsi_associated_SNPs_1176 0 0 0 0 2 Ribosome 1 0.438745358497687 0.019243240356446 1 hPsi_site_7779 iPseU_CNN:0.019243240356446;iRNA_PseU:1 7780 chr5 38885530 38885530 1 + G A LUSC 38885512 + 38885492 38885532 41 GACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACGGA GACTTCAAGACTTTGCACTGTACTTGGGATCCTGGGACAGA < 41bp 1 0.492418264366628 1 0.980491936206818 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide OSMR ENSG00000145623 CDS Human protein_coding chr5:38885512 chr5:38885530 synonymous SNV . 0 39 hPsi_associated_SNPs_1177 0 0 1 0 2 Nucleus 1 0.45309306152514 0.0390161275863641 1 hPsi_site_7780 iPseU_CNN:0.0390161275863641;iRNA_PseU:1 7781 chr12 124497228 124497228 1 + G T LUSC 124497241 + 124497221 124497261 41 GGAAGGCGTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG GGAAGGCTTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG < 41bp 1 0.674215605226133 1 0.99999213218689 experiment 0.651568789547734 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497241 chr12:124497228 synonymous SNV . 0 8 hPsi_associated_SNPs_1179 0 0 1 0 0 Nucleus 1 0.438785671412326 1.5735626220037e-05 1 hPsi_site_7781 iPseU_CNN:1.5735626220037e-05;iRNA_PseU:1 7782 chr6 25973460 25973460 1 + G A LUSC 25973477 + 25973457 25973497 41 TGTGCAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATG TGTACAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATG < 41bp 1 0.454099457050715 1 0.999696135520935 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25973477 chr6:25973460 nonsynonymous SNV 0.007 1 4 hPsi_associated_SNPs_1180 0 0 1 0 1 Cytosol 1 0.512223108321013 0.000607728958130105 0.975553783357975 hPsi_site_7782 iPseU_CNN:0.000607728958130105;iRNA_PseU:0.975553783357975 7783 chr9 97842985 97842985 1 + C T LUSC 97843004 + 97842984 97843024 41 TCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAG TTGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAG < 41bp 1 0.297610387712663 1 0.999197483062744 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97843004 chr9:97842985 nonsynonymous SNV 0.995 4 2 hPsi_associated_SNPs_1181 0 0 1 0 2 Cytosol 1 0.439227335761634 0.00160503387451194 1 hPsi_site_7783 iPseU_CNN:0.00160503387451194;iRNA_PseU:1 not specified not specified 7784 chrX 154282939 154282939 1 + G A LUSC 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGACATCC < 41bp 1 0.305043021657185 1 0.993472099304199 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282939 nonsynonymous SNV 0.998 3 36 hPsi_associated_SNPs_1182 0 0 0 0 1 Ribosome 1 0.537861383605628 0.013055801391602 0.924277232788744 hPsi_site_7784 iPseU_CNN:0.013055801391602;iRNA_PseU:0.924277232788744 7785 chr4 89601366 89601366 1 + T A LUSC 89601352 + 89601332 89601372 41 TCTATGGAATGTTTACCTACTATCAAGATTCAAATCTCTTG TCTATGGAATGTTTACCTACTATCAAGATTCAAAACTCTTG < 41bp 1 0.261596585129427 1 0.900700688362122 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HERC3 ENSG00000138641 CDS Human protein_coding chr4:89601352 chr4:89601366 nonsynonymous SNV 0.998 2 35 hPsi_associated_SNPs_1183 0 0 1 0 1 Ribosome 1 0.438718198918331 0.198598623275756 1 hPsi_site_7785 iPseU_CNN:0.198598623275756;iRNA_PseU:1 7786 chr21 45740004 45740004 1 + G A LUSC 45739992 + 45739972 45740012 41 TCGAGAACAACTGGAACATTTACAAGCTCCTCGCCCACCAG TCGAGAACAACTGGAACATTTACAAGCTCCTCACCCACCAG < 41bp 1 0.570075711482525 1 0.999961495399475 experiment 0.85984857703495 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45739992 chr21:45740004 nonsynonymous SNV 0.992 2 33 hPsi_associated_SNPs_1184 0 0 1 0 2 Ribosome 1 0.439558303470756 7.70092010500267e-05 1 hPsi_site_7786 iPseU_CNN:7.70092010500267e-05;iRNA_PseU:1 7787 chr10 95660719 95660719 1 + C A LUSC 95660707 + 95660687 95660727 41 GAAAAATATAGCCCTTGGGATGCTCTTTTCACCGTGTTCAC GAAAAATATAGCCCTTGGGATGCTCTTTTCACAGTGTTCAC < 41bp 1 0.592416411845833 1 0.862087965011597 experiment 0.815167176308334 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660707 chr10:95660719 synonymous SNV . 0 33 hPsi_associated_SNPs_1185 0 0 1 0 0 exosome 1 0.438718755139626 0.275824069976806 1 hPsi_site_7787 iPseU_CNN:0.275824069976806;iRNA_PseU:1 7788 chr11 68369334 68369334 1 + A T LUSC 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACTAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA < 41bp 1 0.639889091559009 1 0.977342188358307 experiment 0.720221816881983 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369334 synonymous SNV . 0 3 hPsi_associated_SNPs_1186 0 0 0 0 1 Nucleus 1 0.999986290802912 0.045315623283386 2.74183941757489e-05 hPsi_site_7788 iPseU_CNN:0.045315623283386;iRNA_PseU:2.74183941757489e-05 7789 chr1 172559045 172559045 1 + A T LUSC 172559048 + 172559028 172559068 41 GTCTCTCAGTGGTCGCTATCTGGAGGAGCTTAGCCAAAGGT GTCTCTCAGTGGTCGCTTTCTGGAGGAGCTTAGCCAAAGGT < 41bp 1 0.158889792606845 1 0.993452548980713 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SUCO ENSG00000094975 CDS Human protein_coding chr1:172559048 chr1:172559045 nonsynonymous SNV 1.000 4 18 hPsi_associated_SNPs_1187 0 0 1 0 1 Ribosome 1 0.999944786677138 0.013094902038574 0.000110426645724804 hPsi_site_7789 iPseU_CNN:0.013094902038574;iRNA_PseU:0.000110426645724804 Cytochrome-c oxidase deficiency Cytochrome-c oxidase deficiency 7790 chr6 36177588 36177588 1 + G T LUSC 36177606 + 36177586 36177626 41 TGGAGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGACA TGTAGCTGGAGCTGATGCCATTCAATGTTCTGTTGAGGACA < 41bp 1 0.625268204903618 1 0.973380208015442 experiment 0.749463590192763 Functional Loss NA| BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36177606 chr6:36177588 stopgain 1.000 1 3 hPsi_associated_SNPs_1188 0 0 1 1 1 chromatin 1 0.450740285887595 0.053239583969116 1 hPsi_site_7790 iPseU_CNN:0.053239583969116;iRNA_PseU:1 7791 chr1 114515898 114515898 1 + T A LUSC 114515896 + 114515876 114515916 41 AACCAGCTCCATTGCTCATCTTTTCTCCCCACAGGGTTCCT AACCAGCTCCATTGCTCATCTTATCTCCCCACAGGGTTCCT < 41bp 1 0.379862121474625 1 0.994487822055817 experiment 1 Functional Loss NA| HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114515896 chr1:114515898 nonsynonymous SNV 0.996 1 23 hPsi_associated_SNPs_1190 0 0 1 0 0 Cytosol 1 0.999964394175959 0.011024355888366 7.12116480814373e-05 hPsi_site_7791 iPseU_CNN:0.011024355888366;iRNA_PseU:7.12116480814373e-05 7792 chr22 38273863 38273863 1 + C T LUSC 38273846 + 38273826 38273866 41 TCTATGAAGAACTTTTCAGTTACTCCTGCCCCAAGTTCCTG TCTATGAAGAACTTTTCAGTTACTCCTGCCCCAAGTTTCTG < 41bp 1 0.633429948590215 1 0.999935626983643 experiment 0.73314010281957 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38273846 chr22:38273863 synonymous SNV . 0 38 hPsi_associated_SNPs_1191 0 0 1 0 0 Cytosol 1 0.514816428938924 0.000128746032713956 0.970367142122152 hPsi_site_7792 iPseU_CNN:0.000128746032713956;iRNA_PseU:0.970367142122152 7793 chr12 6969353 6969353 1 + C T LUSC 6969351 + 6969331 6969371 41 GGCCTTCTCTCCGGGGAGTATTCCAAGCCAGTACCGGAGTC GGCCTTCTCTCCGGGGAGTATTTCAAGCCAGTACCGGAGTC < 41bp 1 0.342203534658402 1 0.570692121982574 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969351 chr12:6969353 nonsynonymous SNV 0.995 4 23 hPsi_associated_SNPs_1192 0 0 1 0 2 Nucleus 1 0.438718592995102 0.858615756034852 1 hPsi_site_7793 iPseU_CNN:0.858615756034852;iRNA_PseU:1 7794 chr6 17543180 17543180 1 + C T LUSC 17543174 + 17543154 17543194 41 TATTCAGATAAAAGGGAAAGTAAACTCCATTATAATTGGTA TATTCAGATAAAAGGGAAAGTAAACTTCATTATAATTGGTA < 41bp 1 0.370260914649362 1 0.191850274801254 experiment 1 Functional Loss NA| CAP2 ENSG00000112186 CDS Human protein_coding chr6:17543174 chr6:17543180 nonsynonymous SNV 0.946 4 27 hPsi_associated_SNPs_1193 0 0 1 4 1 exosome 1 0.438718590931057 1 1 hPsi_site_7794 iPseU_CNN:1;iRNA_PseU:1 7795 chr10 103826716 103826716 1 + G T LUSC 103826727 + 103826707 103826747 41 CCTGCTGAGGACTGAGTTGATAGGAGACCAGCTAGCCCAGC CCTGCTGAGTACTGAGTTGATAGGAGACCAGCTAGCCCAGC < 41bp 1 0.488872848254444 1 0.997327506542206 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HPS6 ENSG00000166189 CDS Human protein_coding chr10:103826727 chr10:103826716 nonsynonymous SNV 0.749 0 10 hPsi_associated_SNPs_1194 0 0 0 0 0 Ribosome 1 0.438723233024392 0.00534498691558793 1 hPsi_site_7795 iPseU_CNN:0.00534498691558793;iRNA_PseU:1 7796 chrX 54469885 54469885 1 + C T LUSC 54469900 + 54469880 54469920 41 ACCAACGAGTTTGATACAGTTGTGGAAGACGGGAGTCTGCC ACCAATGAGTTTGATACAGTTGTGGAAGACGGGAGTCTGCC < 41bp 1 0.46795608836979 1 0.994830250740051 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSR2 ENSG00000158526 CDS Human protein_coding chrX:54469900 chrX:54469885 synonymous SNV . 0 6 hPsi_associated_SNPs_1195 0 0 1 0 2 Ribosome 1 0.951133464952621 0.0103394985198979 0.0977330700947585 hPsi_site_7796 iPseU_CNN:0.0103394985198979;iRNA_PseU:0.0977330700947585 7797 chr5 60448742 60448742 1 + G A LUSC 60448725 + 60448705 60448745 41 GTGGCTCCCAGCAGCACTGGTAAAACCTTTCAGCCAGGATC GTGGCTCCCAGCAGCACTGGTAAAACCTTTCAGCCAGAATC < 41bp 1 0.300679712422223 1 0.999527454376221 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFAF2 ENSG00000164182 CDS Human protein_coding chr5:60448725 chr5:60448742 nonsynonymous SNV 0.996 4 38 hPsi_associated_SNPs_1196 0 0 1 0 0 Ribosome 1 0.438718591301989 0.000945091247557928 1 hPsi_site_7797 iPseU_CNN:0.000945091247557928;iRNA_PseU:1 7798 chr2 152311514 152311514 1 + T C LUSC 152311498 + 152311478 152311518 41 AACTTATTGTGAAAGTGATCTATTCTTTCCACACACTGAGC AACTTATTGTGAAAGTGATCTATTCTTTCCACACACCGAGC < 41bp 1 0.155516664526963 1 0.999696552753448 experiment 1 Functional Loss NA| RIF1 ENSG00000080345 CDS Human protein_coding chr2:152311498 chr2:152311514 nonsynonymous SNV 0.999 4 37 hPsi_associated_SNPs_1197 0 0 1 0 0 Nucleus 1 0.399651166625441 0.000606894493103916 1 hPsi_site_7798 iPseU_CNN:0.000606894493103916;iRNA_PseU:1 7799 chr1 986883 986883 1 + G A LUSC 986901 + 986881 986921 41 CAGGTGGACGTCACGTCCTTTGCAGGTCACCCCTGCACCCG CAAGTGGACGTCACGTCCTTTGCAGGTCACCCCTGCACCCG < 41bp 1 0.438644545783762 1 0.97398453950882 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:986901 chr1:986883 synonymous SNV . 0 3 hPsi_associated_SNPs_1198 0 0 1 0 1 Endoplasmic reticulum 1 0.438703323346013 0.05203092098236 1 hPsi_site_7799 iPseU_CNN:0.05203092098236;iRNA_PseU:1 7800 chr14 23344911 23344911 1 + G T LUSC 23344897 + 23344877 23344917 41 CTTGGGCTTTGGAGATGCAGTGCATGTGTATGACGGCCCTG CTTGGGCTTTGGAGATGCAGTGCATGTGTATGACTGCCCTG < 41bp 1 0.173964120965564 1 0.957388520240784 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LRP10 ENSG00000197324 CDS Human protein_coding chr14:23344897 chr14:23344911 nonsynonymous SNV 0.906 4 35 hPsi_associated_SNPs_1199 0 0 1 0 0 Ribosome 1 0.44093709972677 0.085222959518432 1 hPsi_site_7800 iPseU_CNN:0.085222959518432;iRNA_PseU:1 7801 chr2 171818196 171818196 1 + C T LUSC 171818194 + 171818174 171818214 41 TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGT TGTACCAACAGTACCGTTATTGTCACCACAAGTAAACCAGT < 41bp 1 0.400261209862019 1 0.99664181470871 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818194 chr2:171818196 nonsynonymous SNV 1.000 0 23 hPsi_associated_SNPs_1201 0 0 1 0 2 Ribosome 1 0.671682981901792 0.0067163705825799 0.656634036196415 hPsi_site_7801 iPseU_CNN:0.0067163705825799;iRNA_PseU:0.656634036196415 7802 chrX 152960070 152960070 1 + C T LUSC 152960065 + 152960045 152960085 41 GGATGAAATGGTGCTGGTCCTTCTTCACCCCGCTGGTCTGC GGATGAAATGGTGCTGGTCCTTCTTTACCCCGCTGGTCTGC < 41bp 1 0.666319252285482 1 0.999898672103882 experiment 0.667361495429035 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152960065 chrX:152960070 synonymous SNV . 0 26 hPsi_associated_SNPs_1202 0 0 0 0 2 Ribosome 1 0.470176022663513 0.000202655792236106 1 hPsi_site_7802 iPseU_CNN:0.000202655792236106;iRNA_PseU:1 7803 chr10 95660692 95660692 1 + A G LUSC 95660707 + 95660687 95660727 41 GAAAAATATAGCCCTTGGGATGCTCTTTTCACCGTGTTCAC GAAAAGTATAGCCCTTGGGATGCTCTTTTCACCGTGTTCAC < 41bp 1 0.345028286551707 1 0.999092280864716 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660707 chr10:95660692 synonymous SNV . 0 6 hPsi_associated_SNPs_1203 0 0 1 0 0 exosome 1 0.650610965934303 0.00181543827056796 0.698778068131393 hPsi_site_7803 iPseU_CNN:0.00181543827056796;iRNA_PseU:0.698778068131393 7804 chr12 98992432 98992432 1 + A T LUSC 98992435 + 98992415 98992455 41 AGCCAGGTTATGCCAACACTTTGAGGGATGCAGCTCCCAAA AGCCAGGTTATGCCAACTCTTTGAGGGATGCAGCTCCCAAA < 41bp 1 0.546850749774435 1 0.997340381145477 experiment 0.906298500451131 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992435 chr12:98992432 nonsynonymous SNV 0.991 1 18 hPsi_associated_SNPs_1204 0 0 1 0 0 Ribosome 1 0.808754951321727 0.00531923770904608 0.382490097356546 hPsi_site_7804 iPseU_CNN:0.00531923770904608;iRNA_PseU:0.382490097356546 7805 chr2 204116832 204116832 1 + G T LUSC 204116815 + 204116795 204116835 41 CTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAAGGTA CTGATTCTCTGAAGAGTAACTTTGCCCTCCTCCTAAATGTA < 41bp 1 0.620150329331228 1 0.998480618000031 experiment 0.759699341337544 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204116815 chr2:204116832 nonsynonymous SNV 0.988 2 38 hPsi_associated_SNPs_1205 0 0 1 0 1 Nucleus 1 0.43871859299402 0.00303876399993808 1 hPsi_site_7805 iPseU_CNN:0.00303876399993808;iRNA_PseU:1 7806 chr1 44072012 44072012 1 + G A LUSC 44072025 + 44072005 44072045 41 TGCTCCCGGAGACCTTTACCTTGGGGGACAAGAAGAACTAC TGCTCCCAGAGACCTTTACCTTGGGGGACAAGAAGAACTAC < 41bp 1 0.520343828087453 1 0.988075494766235 experiment 0.959312343825094 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PTPRF ENSG00000142949 CDS Human protein_coding chr1:44072025 chr1:44072012 synonymous SNV . 0 8 hPsi_associated_SNPs_1206 0 0 1 0 0 Ribosome 1 0.439050614594121 0.02384901046753 1 hPsi_site_7806 iPseU_CNN:0.02384901046753;iRNA_PseU:1 7807 chr7 8095089 8095089 1 + A G LUSC 8095098 + 8095078 8095118 41 AGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAG AGGCAGCAACTGCAACGCAGTAAACAGAGTAGTCGTCACAG < 41bp 1 0.522937002530696 1 0.999991178512573 experiment 0.954125994938608 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLCCI1 ENSG00000106415 CDS Human protein_coding chr7:8095098 chr7:8095089 synonymous SNV . 0 12 hPsi_associated_SNPs_1208 0 0 1 0 2 Ribosome 1 0.680400095474253 1.76429748539597e-05 0.639199809051494 hPsi_site_7807 iPseU_CNN:1.76429748539597e-05;iRNA_PseU:0.639199809051494 7808 chr17 29162409 29162409 1 + T A LUSC 29162404 + 29162384 29162424 41 CTTAATGAAAAATGTCTATATGAAGTAGGAAGAGATGATAA CTTAATGAAAAATGTCTATATGAAGAAGGAAGAGATGATAA < 41bp 1 0.0965876981472064 1 0.928867697715759 experiment 1 Functional Loss NA| ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29162404 chr17:29162409 nonsynonymous SNV 0.676 0 26 hPsi_associated_SNPs_1209 0 0 1 0 0 chromatin 1 0.999987541480622 0.142264604568482 2.49170387560671e-05 hPsi_site_7808 iPseU_CNN:0.142264604568482;iRNA_PseU:2.49170387560671e-05 7809 chr6 25973469 25973469 1 + C T LUSC 25973477 + 25973457 25973497 41 TGTGCAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATG TGTGCAATGTTTTCAAGCTTTACTTCGATGTGAAGAAAATG < 41bp 1 0.605376292669288 1 0.993683815002441 experiment 0.789247414661424 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25973477 chr6:25973469 nonsynonymous SNV 0.010 2 13 hPsi_associated_SNPs_1210 0 0 1 0 1 Cytosol 1 0.450720198084683 0.0126323699951181 1 hPsi_site_7809 iPseU_CNN:0.0126323699951181;iRNA_PseU:1 7810 chr2 171807844 171807844 1 + G T LUSC 171807858 + 171807838 171807878 41 TCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAA TCTGAATATCTATTCAGCCTTATCGAAACACATGAAGCAAA < 41bp 1 0.65896867204872 1 0.995463371276855 experiment 0.682062655902561 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171807858 chr2:171807844 nonsynonymous SNV 0.987 4 7 hPsi_associated_SNPs_1211 0 0 1 0 1 Ribosome 1 0.439632406510322 0.00907325744628995 1 hPsi_site_7810 iPseU_CNN:0.00907325744628995;iRNA_PseU:1 7811 chr1 204379712 204379712 1 + C A LUSC 204379716 - 204379696 204379736 41 GCCGCTGAGTGCAGAACTCATTCCGGCCTCGTGGCAGGGAT GCCGCTGAGTGCAGAACTCATTCCTGCCTCGTGGCAGGGAT < 41bp 1 0.679964880382743 1 0.582866311073303 experiment 0.640070239234514 Functional Loss NA| PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204379716 chr1:204379712 synonymous SNV . 0 25 hPsi_associated_SNPs_1212 0 0 1 0 0 Ribosome 1 0.438868714592435 0.834267377853394 1 hPsi_site_7811 iPseU_CNN:0.834267377853394;iRNA_PseU:1 7812 chr11 134110004 134110004 1 + G C LUSC 134110008 + 134109988 134110028 41 ATCAAGATGGAGGTTGGGATTGAGGACTGTCTGCACATTGA ATCAAGATGGAGGTTGCGATTGAGGACTGTCTGCACATTGA < 41bp 1 0.429755357414018 1 0.992807984352112 experiment 1 Functional Loss NA| VPS26B ENSG00000151502 CDS Human protein_coding chr11:134110008 chr11:134110004 nonsynonymous SNV 0.985 4 17 hPsi_associated_SNPs_1213 0 0 1 0 1 Ribosome 1 0.431102544133489 0.0143840312957759 1 hPsi_site_7812 iPseU_CNN:0.0143840312957759;iRNA_PseU:1 7813 chr12 70723247 70723247 1 + C T LUSC 70723240 + 70723220 70723260 41 ATGAGGGGGATGAGCAACAATACCCCTCAGTTAAATCGCAG ATGAGGGGGATGAGCAACAATACCCCTTAGTTAAATCGCAG < 41bp 1 0.554478235227483 1 0.947821140289307 experiment 0.891043529545035 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70723240 chr12:70723247 stopgain 1.000 1 28 hPsi_associated_SNPs_1214 0 0 1 0 1 Nucleus 1 0.460890683448035 0.104357719421386 1 hPsi_site_7813 iPseU_CNN:0.104357719421386;iRNA_PseU:1 7814 chr17 78079636 78079636 1 + A C MESO 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGGCACCGTCCCCACTCTACAGCGTGGCGTTCTCCG < 41bp 1 0.42207626400722 1 0.981778621673584 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079636 nonsynonymous SNV 0.968 1 33 hPsi_associated_SNPs_1217 0 0 1 0 2 Endoplasmic reticulum 1 0.442112159545598 0.036442756652832 1 hPsi_site_7814 iPseU_CNN:0.036442756652832;iRNA_PseU:1 4p partial monosomy syndrome 4p partial monosomy syndrome 7815 chr7 2284301 2284301 1 + G A MESO 2284313 + 2284293 2284333 41 GGCCGGCCGGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAG GGCCGGCCAGTGGAATGGCTTTGGGGGCAAAGTGCAAGAAG < 41bp 1 0.634369718420524 1 0.996325969696045 experiment 0.731260563158952 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NUDT1 ENSG00000106268 CDS Human protein_coding chr7:2284313 chr7:2284301 nonsynonymous SNV 0.957 1 9 hPsi_associated_SNPs_1218 0 0 1 0 1 Ribosome 1 0.43871859114084 0.00734806060790993 1 hPsi_site_7815 iPseU_CNN:0.00734806060790993;iRNA_PseU:1 4p partial monosomy syndrome 4p partial monosomy syndrome 7816 chr16 90001993 90001993 1 + C A OV 90001991 + 90001971 90002011 41 GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAG GCACGGCCATCCAGGAGCTGTTAAAGCGCATCTCCGAGCAG < 41bp 1 0.636542923675822 1 0.999438881874084 experiment 0.726914152648356 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001991 chr16:90001993 nonsynonymous SNV 1.000 5 23 hPsi_associated_SNPs_1219 0 0 0 0 0 chromatin 1 0.438718593106383 0.00112223625183194 1 hPsi_site_7816 iPseU_CNN:0.00112223625183194;iRNA_PseU:1 7817 chr19 11557940 11557940 1 + G A OV 11557927 + 11557907 11557947 41 ACACAGACAGACGCCACCTCTTTCTACGACCGCGTCTGGGC ACACAGACAGACGCCACCTCTTTCTACGACCGCATCTGGGC < 41bp 1 0.537164629383282 1 0.98281341791153 experiment 0.925670741233437 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11557927 chr19:11557940 nonsynonymous SNV 0.757 0 34 hPsi_associated_SNPs_1220 0 0 1 0 2 Nucleus 1 0.83335281852501 0.03437316417694 0.33329436294998 hPsi_site_7817 iPseU_CNN:0.03437316417694;iRNA_PseU:0.33329436294998 7818 chr1 163317604 163317604 1 + T C OV 163317621 + 163317601 163317641 41 AAATTGAAGACTGAAGAAAATTCGTTCAAAAGACTGATGAT AAACTGAAGACTGAAGAAAATTCGTTCAAAAGACTGATGAT < 41bp 1 0.398005277285333 1 0.974815011024475 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163317621 chr1:163317604 synonymous SNV . 0 4 hPsi_associated_SNPs_1222 0 0 1 0 1 Cytosol 1 0.983747884309063 0.05036997795105 0.0325042313818744 hPsi_site_7818 iPseU_CNN:0.05036997795105;iRNA_PseU:0.0325042313818744 not specified not specified 7819 chr7 92905560 92905560 1 + A G OV 92905541 + 92905521 92905561 41 CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTGT < 41bp 1 0.366146657547163 1 0.999505162239075 experiment 1 Functional Loss NA| VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905541 chr7:92905560 synonymous SNV . 0 40 hPsi_associated_SNPs_1223 0 0 1 0 2 Cytosol 1 0.943922865836016 0.00098967552184992 0.112154268327968 hPsi_site_7819 iPseU_CNN:0.00098967552184992;iRNA_PseU:0.112154268327968 7820 chr3 160945052 160945052 1 + G T OV 160945072 + 160945052 160945092 41 GAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT TAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT < 41bp 1 0.38862114481007 1 0.93484503030777 experiment 1 Functional Loss NA| NMD3 ENSG00000169251 CDS Human protein_coding chr3:160945072 chr3:160945052 nonsynonymous SNV 0.993 0 1 hPsi_associated_SNPs_1224 0 0 1 0 2 Nucleus 1 0.43871870467813 0.13030993938446 1 hPsi_site_7820 iPseU_CNN:0.13030993938446;iRNA_PseU:1 7821 chr7 819707 819707 1 + G T OV 819697 + 819677 819717 41 GTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTAC GTGCCAACGCAAAATCCTACTATCAGAGCATTGTCCAGTAC < 41bp 1 0.369688099229205 1 0.99976110458374 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819697 chr7:819707 nonsynonymous SNV 0.139 1 31 hPsi_associated_SNPs_1226 0 0 1 0 1 Ribosome 1 0.421485081162193 0.000477790832519975 1 hPsi_site_7821 iPseU_CNN:0.000477790832519975;iRNA_PseU:1 7822 chr2 198571020 198571020 1 + C G OV 198571019 + 198570999 198571039 41 TGGCTACCCAAATGCTGAGTTCAAATCTTGGTGGCCGGCCA TGGCTACCCAAATGCTGAGTTGAAATCTTGGTGGCCGGCCA < 41bp 1 0.401019940753866 1 0.999383687973022 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571019 chr2:198571020 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_1229 0 0 1 0 0 Ribosome 1 0.438713935054382 0.00123262405395597 1 hPsi_site_7822 iPseU_CNN:0.00123262405395597;iRNA_PseU:1 7823 chr19 50158050 50158050 1 + A C OV 50158038 + 50158018 50158058 41 TCCCTCTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACC TCCCTCTGGGGGGCTGCGGTTCGACCCCCCCCCCCCCCACC < 41bp 1 0.492131015541272 1 0.999825119972229 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158038 chr19:50158050 nonsynonymous SNV 0.962 2 33 hPsi_associated_SNPs_1230 0 0 1 0 1 Cytosol 1 0.438741345682915 0.000349760055541992 1 hPsi_site_7823 iPseU_CNN:0.000349760055541992;iRNA_PseU:1 7824 chr6 17543181 17543181 1 + C T OV 17543174 + 17543154 17543194 41 TATTCAGATAAAAGGGAAAGTAAACTCCATTATAATTGGTA TATTCAGATAAAAGGGAAAGTAAACTCTATTATAATTGGTA < 41bp 1 0.351974161363853 1 0.000781416893005371 experiment 1 Functional Loss NA| CAP2 ENSG00000112186 CDS Human protein_coding chr6:17543174 chr6:17543181 synonymous SNV . 0 28 hPsi_associated_SNPs_1231 0 0 1 4 1 exosome 1 0.449452318254125 1 1 hPsi_site_7824 iPseU_CNN:1;iRNA_PseU:1 7825 chr14 21464436 21464436 1 + C A OV 21464416 + 21464396 21464436 41 TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCA < 41bp 1 0.455659281870398 1 0.999988675117493 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464416 chr14:21464436 synonymous SNV . 0 41 hPsi_associated_SNPs_1232 0 0 1 0 1 Ribosome 1 0.439617148461651 2.26497650139823e-05 1 hPsi_site_7825 iPseU_CNN:2.26497650139823e-05;iRNA_PseU:1 7826 chr12 102108356 102108356 1 + A T OV 102108355 + 102108335 102108375 41 TGGTTTTTTTTCTGCTCTTTTATTGGGATGTTTGTGTTTTA TGGTTTTTTTTCTGCTCTTTTTTTGGGATGTTTGTGTTTTA < 41bp 1 0.228665846369343 1 0.985686421394348 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102108355 chr12:102108356 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_1233 0 0 1 3 2 Ribosome 1 0.438736335410496 0.0286271572113039 1 hPsi_site_7826 iPseU_CNN:0.0286271572113039;iRNA_PseU:1 7827 chr3 31663662 31663662 1 + C T OV 31663646 + 31663626 31663666 41 AGTGATGGTGCGACTGATGTTGACTTTGACTCCAGTCGTGT AGTGATGGTGCGACTGATGTTGACTTTGACTCCAGTTGTGT < 41bp 1 0.532952594193712 1 0.944778442382812 experiment 0.934094811612575 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31663646 chr3:31663662 synonymous SNV . 0 37 hPsi_associated_SNPs_1235 0 0 1 0 1 Nucleus 1 0.439354813036333 0.110443115234376 1 hPsi_site_7827 iPseU_CNN:0.110443115234376;iRNA_PseU:1 7828 chr21 33038773 33038773 1 + G C OV 33038786 + 33038766 33038806 41 TACCAGTGCAGGTCCTCACTTTAATCCTCTATCCAGAAAAC TACCAGTCCAGGTCCTCACTTTAATCCTCTATCCAGAAAAC < 41bp 1 0.698021838558153 1 0.991767406463623 experiment 0.603956322883693 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SOD1 ENSG00000142168 CDS Human protein_coding chr21:33038786 chr21:33038773 nonsynonymous SNV 1.000 5 8 hPsi_associated_SNPs_1236 0 0 1 0 2 Ribosome 1 0.438719627495234 0.0164651870727539 1 hPsi_site_7828 iPseU_CNN:0.0164651870727539;iRNA_PseU:1 7829 chr5 141313844 141313844 1 + A T OV 141313856 + 141313836 141313876 41 AGGGCCACAGCCTGGCTCAGTACCGCTATGCCAGGTGCCTA AGGGCCACTGCCTGGCTCAGTACCGCTATGCCAGGTGCCTA < 41bp 1 0.688838406957913 1 0.999785304069519 experiment 0.622323186084175 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141313856 chr5:141313844 nonsynonymous SNV 0.999 2 9 hPsi_associated_SNPs_1237 0 0 1 0 1 Ribosome 1 0.983460585223638 0.000429391860961914 0.0330788295527233 hPsi_site_7829 iPseU_CNN:0.000429391860961914;iRNA_PseU:0.0330788295527233 7830 chr15 91496495 91496495 1 + G T OV 91496497 + 91496477 91496517 41 TGCCGGGGGCTTGGCCATGCTTACCTCCATGCGGCCCACGC TGCCGGGGGCTTGGCCATTCTTACCTCCATGCGGCCCACGC < 41bp 1 0.680797293105142 1 0.99994021654129 experiment 0.638405413789715 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNC45A ENSG00000140553 CDS Human protein_coding chr15:91496497 chr15:91496495 nonsynonymous SNV 1.000 1 19 hPsi_associated_SNPs_1238 0 0 1 0 1 Nucleus 1 0.439302884712357 0.0001195669174201 1 hPsi_site_7830 iPseU_CNN:0.0001195669174201;iRNA_PseU:1 7831 chrX 150572160 150572160 1 + G A OV 150572174 + 150572154 150572194 41 TTTAATGATCACTGTTCCTATTGGGTTATATTTCACAACTA TTTAATAATCACTGTTCCTATTGGGTTATATTTCACAACTA < 41bp 1 0.539821589603155 1 0.884472012519836 experiment 0.920356820793689 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VMA21 ENSG00000160131 CDS Human protein_coding chrX:150572174 chrX:150572160 nonsynonymous SNV 1.000 2 7 hPsi_associated_SNPs_1240 0 0 1 0 2 Ribosome 1 0.438718425677508 0.231055974960328 1 hPsi_site_7831 iPseU_CNN:0.231055974960328;iRNA_PseU:1 Diastrophic dysplasia Diastrophic dysplasia 7832 chr8 38095663 38095663 1 + G T OV 38095652 + 38095632 38095672 41 CAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGT CAGGGTCTGATGATTGGGGTTCAACACCCACTGAGCAGGGT < 41bp 1 0.428979382841809 1 0.926630616188049 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095652 chr8:38095663 synonymous SNV . 0 32 hPsi_associated_SNPs_1243 0 0 1 0 2 chromatin 1 0.438717433648736 0.146738767623902 1 hPsi_site_7832 iPseU_CNN:0.146738767623902;iRNA_PseU:1 Succinate-semialdehyde dehydrogenase deficiency Succinate-semialdehyde dehydrogenase deficiency 7833 chr8 145151970 145151970 1 + A G OV 145151971 + 145151951 145151991 41 ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTG ATGTCCCAGATAGCCAAGGGTGTGTGCACCTTCCTGCGCTG < 41bp 1 0.452264983685335 1 0.294565618038177 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151971 chr8:145151970 nonsynonymous SNV 0.896 4 20 hPsi_associated_SNPs_1244 0 0 1 0 2 Ribosome 1 0.621773925075479 1 0.756452149849041 hPsi_site_7833 iPseU_CNN:1;iRNA_PseU:0.756452149849041 7834 chr9 36083418 36083418 1 + C A OV 36083425 + 36083405 36083445 41 CCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTC CCGAGAATACTGTAAAGCCATTTTTCGAACAGACTCTTCTC < 41bp 1 0.235709037386393 1 0.998421788215637 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RECK ENSG00000122707 CDS Human protein_coding chr9:36083425 chr9:36083418 nonsynonymous SNV 1.000 2 14 hPsi_associated_SNPs_1245 0 0 0 3 1 exosome 1 0.438723138409729 0.00315642356872603 1 hPsi_site_7834 iPseU_CNN:0.00315642356872603;iRNA_PseU:1 7835 chrX 100387222 100387222 1 + C A OV 100387237 + 100387217 100387257 41 CCTTCCTCTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC CCTTCATCTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC < 41bp 1 0.340201020072848 1 0.998013257980347 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CENPI ENSG00000102384 CDS Human protein_coding chrX:100387237 chrX:100387222 nonsynonymous SNV 1.000 1 6 hPsi_associated_SNPs_1246 0 0 0 0 2 Nucleus 1 0.43875091343946 0.00397348403930597 1 hPsi_site_7835 iPseU_CNN:0.00397348403930597;iRNA_PseU:1 7836 chr5 141318134 141318134 1 + G A OV 141318126 + 141318106 141318146 41 ACAGTTACAGGACTGAAGTCTTTCTCCAGCCCCTCCCTCTG ACAGTTACAGGACTGAAGTCTTTCTCCAACCCCTCCCTCTG < 41bp 1 0.516905499823444 1 0.998853921890259 experiment 0.966189000353111 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141318126 chr5:141318134 nonsynonymous SNV 1.000 4 29 hPsi_associated_SNPs_1247 0 0 1 0 1 Ribosome 1 0.465956065517268 0.00229215621948198 1 hPsi_site_7836 iPseU_CNN:0.00229215621948198;iRNA_PseU:1 7837 chrX 84526379 84526379 1 + T C OV 84526363 + 84526343 84526383 41 AGCACCAATTCAAGTGACCTTAAGCGGCACATCATATCTGT AGCACCAATTCAAGTGACCTTAAGCGGCACATCATACCTGT < 41bp 1 0.583719257559049 1 0.998226761817932 experiment 0.832561484881903 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84526363 chrX:84526379 nonsynonymous SNV 1.000 4 37 hPsi_associated_SNPs_1248 0 0 1 0 0 cytosol 1 0.993389818885713 0.00354647636413596 0.013220362228574 hPsi_site_7837 iPseU_CNN:0.00354647636413596;iRNA_PseU:0.013220362228574 7838 chrX 19373539 19373539 1 + C T PAAD 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATTGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC < 41bp 1 0.442774108292334 1 0.840084552764893 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373539 nonsynonymous SNV 1.000 4 3 hPsi_associated_SNPs_1252 0 0 1 0 1 Ribosome 1 0.446756128420343 0.319830894470214 1 hPsi_site_7838 iPseU_CNN:0.319830894470214;iRNA_PseU:1 7839 chr6 26200158 26200158 1 + C A PAAD 26200178 + 26200158 26200198 41 CTCTAAGTAATTCTAACGTCTTCATACCCAATCCCAAAGGC ATCTAAGTAATTCTAACGTCTTCATACCCAATCCCAAAGGC < 41bp 1 0.682597659900203 1 0.997348368167877 experiment 0.634804680199593 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HIST1H2BF ENSG00000197846 CDS Human other chr6:26200178 chr6:26200158 nonsynonymous SNV 0.867 2 1 hPsi_associated_SNPs_1253 0 0 1 0 0 exosome 1 0.438730204943685 0.00530326366424605 1 hPsi_site_7839 iPseU_CNN:0.00530326366424605;iRNA_PseU:1 Maple syrup urine disease Maple syrup urine disease 7840 chr16 30664242 30664242 1 + G A PAAD 30664253 + 30664233 30664273 41 AGGCCTCCCGACCCTCTGTGTTTGTGTCGCGAGCCCTTGAG AGGCCTCCCAACCCTCTGTGTTTGTGTCGCGAGCCCTTGAG < 41bp 1 0.658239942935924 1 0.928213238716125 experiment 0.683520114128152 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664253 chr16:30664242 nonsynonymous SNV 0.980 0 10 hPsi_associated_SNPs_1254 0 0 1 0 1 Cytosol 1 0.474426692861178 0.14357352256775 1 hPsi_site_7840 iPseU_CNN:0.14357352256775;iRNA_PseU:1 Maple syrup urine disease Maple syrup urine disease 7841 chr4 48850458 48850458 1 + T G PAAD 48850445 + 48850425 48850465 41 CAAGTCATCCCAAATATGGTTCCATCCCTAAACTTATACGT CAAGTCATCCCAAATATGGTTCCATCCCTAAACGTATACGT < 41bp 1 0.691920456595978 1 0.999862551689148 experiment 0.616159086808044 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48850445 chr4:48850458 nonsynonymous SNV 1.000 4 34 hPsi_associated_SNPs_1255 0 0 1 2 2 Ribosome 1 0.4387188612047 0.000274896621704102 1 hPsi_site_7841 iPseU_CNN:0.000274896621704102;iRNA_PseU:1 7842 chr1 20964418 20964418 1 + G C PAAD 20964399 + 20964379 20964419 41 CACGAGACGCTTGCAGGGCTTTCGGCTGGAGGAGTATCTGA CACGAGACGCTTGCAGGGCTTTCGGCTGGAGGAGTATCTCA < 41bp 1 0.588221180714744 1 0.996622800827026 experiment 0.823557638570513 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PINK1 ENSG00000158828 CDS Human protein_coding chr1:20964399 chr1:20964418 synonymous SNV . 0 40 hPsi_associated_SNPs_1256 0 0 1 0 1 Ribosome 1 0.43946839530877 0.00675439834594793 1 hPsi_site_7842 iPseU_CNN:0.00675439834594793;iRNA_PseU:1 Cardiomyopathy Cardiomyopathy 7843 chr1 22405018 22405018 1 + A G PAAD 22405038 + 22405018 22405058 41 AAACATGTCTCCTGATATCCTACACAACAAACAAATTTCCA GAACATGTCTCCTGATATCCTACACAACAAACAAATTTCCA < 41bp 1 0.617116585028325 1 0.999824285507202 experiment 0.765766829943351 Functional Loss NA| CDC42 ENSG00000070831 CDS Human protein_coding chr1:22405038 chr1:22405018 nonsynonymous SNV 1.000 5 1 hPsi_associated_SNPs_1258 0 0 1 0 2 Ribosome 1 0.438358485284347 0.000351428985595925 1 hPsi_site_7843 iPseU_CNN:0.000351428985595925;iRNA_PseU:1 7844 chr7 100466383 100466383 1 + G T PAAD 100466392 + 100466372 100466412 41 GAAGTCTGGGGGCCTGGCTATAGGAGCCAGAGAGAGCCAGG GAAGTCTGGGGTCCTGGCTATAGGAGCCAGAGAGAGCCAGG < 41bp 1 0.526063868689956 1 0.998884856700897 experiment 0.947872262620088 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466392 chr7:100466383 synonymous SNV . 0 12 hPsi_associated_SNPs_1259 0 0 1 1 1 Ribosome 1 0.439006148841231 0.00223028659820601 1 hPsi_site_7844 iPseU_CNN:0.00223028659820601;iRNA_PseU:1 7845 chr14 24429127 24429127 1 + G T PAAD 24429131 + 24429111 24429151 41 GCTGTGAAGCTTCATGGAGGTATCGATATCCTAGTCTCCAA GCTGTGAAGCTTCATGTAGGTATCGATATCCTAGTCTCCAA < 41bp 1 0.645955095728672 1 0.999999523162842 experiment 0.708089808542655 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHRS4 ENSG00000157326 CDS Human protein_coding chr14:24429131 chr14:24429127 nonsynonymous SNV 0.225 3 17 hPsi_associated_SNPs_1260 0 0 1 0 2 Ribosome 1 0.438718612627429 9.53674315962161e-07 1 hPsi_site_7845 iPseU_CNN:9.53674315962161e-07;iRNA_PseU:1 7846 chr17 40925498 40925498 1 + C A PAAD 40925490 + 40925470 40925510 41 TTCCGGGTTTCCTGGGCTACTACGATGGCGATGAGTTTCGA TTCCGGGTTTCCTGGGCTACTACGATGGAGATGAGTTTCGA < 41bp 1 0.435459386291886 1 0.993671774864197 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide VPS25 ENSG00000131475 CDS Human protein_coding chr17:40925490 chr17:40925498 nonsynonymous SNV 1.000 1 29 hPsi_associated_SNPs_1261 0 0 1 0 1 Ribosome 1 0.439269419530833 0.012656450271606 1 hPsi_site_7846 iPseU_CNN:0.012656450271606;iRNA_PseU:1 7847 chr17 65916168 65916168 1 + T G PCPG 65916167 + 65916147 65916187 41 AATCACAACAACAGAAATAATTAAGAGGAGAGATGTTGGTC AATCACAACAACAGAAATAATGAAGAGGAGAGATGTTGGTC < 41bp 1 0.051240132648571 1 0.00136023759841919 experiment 1 Functional Loss NA| BPTF ENSG00000171634 CDS Human protein_coding chr17:65916167 chr17:65916168 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_1262 0 0 1 0 2 Cytosol 1 0.438731663451384 1 1 hPsi_site_7847 iPseU_CNN:1;iRNA_PseU:1 7848 chr19 3762707 3762707 1 + C G PRAD 3762693 + 3762673 3762713 41 CACTTGCAAGCTGCCCGCAATACGTCATGGCGACCAAACGC CACTTGCAAGCTGCCCGCAATACGTCATGGCGACGAAACGC < 41bp 1 0.583999355575297 1 0.999540209770203 experiment 0.832001288849406 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762693 chr19:3762707 synonymous SNV . 0 35 hPsi_associated_SNPs_1263 0 0 1 0 0 Ribosome 1 0.443633379102305 0.00091958045959406 1 hPsi_site_7848 iPseU_CNN:0.00091958045959406;iRNA_PseU:1 7849 chrX 154282921 154282921 1 + G C PRAD 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGACGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.699535485740485 1 0.999909281730652 experiment 0.60092902851903 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282921 nonsynonymous SNV 1.000 3 18 hPsi_associated_SNPs_1264 0 0 1 0 1 Ribosome 1 0.438719544444293 0.000181436538696067 1 hPsi_site_7849 iPseU_CNN:0.000181436538696067;iRNA_PseU:1 7850 chr2 32667453 32667453 1 + C T PRAD 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACATCGTATGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA < 41bp 1 0.552806288084552 1 0.989638566970825 experiment 0.894387423830897 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667453 nonsynonymous SNV 0.988 3 9 hPsi_associated_SNPs_1265 0 0 1 0 2 Nucleus 1 0.439163227503896 0.0207228660583501 1 hPsi_site_7850 iPseU_CNN:0.0207228660583501;iRNA_PseU:1 7851 chr10 116734977 116734977 1 + A G PRAD 116734957 + 116734937 116734977 41 TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAA TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAG < 41bp 1 0.507169141188458 1 0.988315165042877 experiment 0.985661717623084 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116734957 chr10:116734977 nonsynonymous SNV 0.996 1 41 hPsi_associated_SNPs_1269 0 0 1 0 1 Ribosome 1 0.58159308381908 0.023369669914246 0.836813832361841 hPsi_site_7851 iPseU_CNN:0.023369669914246;iRNA_PseU:0.836813832361841 7852 chr1 226027660 226027660 1 + G A PRAD 226027678 + 226027658 226027698 41 CCGTCAAGGAGAAGGTATTCTACAGCCTGATGAGGGAGAGC CCATCAAGGAGAAGGTATTCTACAGCCTGATGAGGGAGAGC < 41bp 1 0.0905820823971609 1 0.894424557685852 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027678 chr1:226027660 nonsynonymous SNV 0.946 0 3 hPsi_associated_SNPs_1271 0 0 1 0 1 Endoplasmic reticulum 1 0.994191069467385 0.211150884628296 0.01161786106523 hPsi_site_7852 iPseU_CNN:0.211150884628296;iRNA_PseU:0.01161786106523 7853 chr16 2817170 2817170 1 + C T PRAD 2817162 + 2817142 2817182 41 GCTGCAAGAATGTCCCAGGTTCCAGCCCCGGTGCCTCTCAT GCTGCAAGAATGTCCCAGGTTCCAGCCCTGGTGCCTCTCAT < 41bp 1 0.0958696100436988 1 0.999898910522461 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2817162 chr16:2817170 nonsynonymous SNV 0.661 2 29 hPsi_associated_SNPs_1272 0 0 1 0 0 Nucleus 1 0.438718594074561 0.000202178955077903 1 hPsi_site_7853 iPseU_CNN:0.000202178955077903;iRNA_PseU:1 Blood protein levels 7854 chr2 207425911 207425911 1 + G A PRAD 207425894 + 207425874 207425914 41 AGAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC AGAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCACAC < 41bp 1 0.528344263679612 1 0.212081283330917 experiment 0.943311472640777 Functional Loss NA| ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207425894 chr2:207425911 nonsynonymous SNV 0.991 0 38 hPsi_associated_SNPs_1273 0 0 0 0 2 Ribosome 1 0.686329782895784 1 0.627340434208432 hPsi_site_7854 iPseU_CNN:1;iRNA_PseU:0.627340434208432 7855 chr6 1390758 1390758 1 + G A PRAD 1390747 + 1390727 1390767 41 TCATGTTCGAGGAGGGCTCGTTCCGCCGCCGGCCGCGCGGC TCATGTTCGAGGAGGGCTCGTTCCGCCGCCGACCGCGCGGC < 41bp 1 0.529070745291936 1 0.998362004756927 experiment 0.941858509416128 Functional Loss NA| FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390747 chr6:1390758 synonymous SNV . 0 32 hPsi_associated_SNPs_1274 0 0 0 0 0 exosome 1 0.558074235272898 0.00327599048614591 0.883851529454204 hPsi_site_7855 iPseU_CNN:0.00327599048614591;iRNA_PseU:0.883851529454204 7856 chr19 16338426 16338426 1 + C T READ 16338424 + 16338404 16338444 41 AGTGTGTGCGGCTATCACGCTTCGAGAATGACCGCACCATC AGTGTGTGCGGCTATCACGCTTTGAGAATGACCGCACCATC < 41bp 1 0.635362039318722 1 0.998241066932678 experiment 0.729275921362555 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338424 chr19:16338426 synonymous SNV . 0 23 hPsi_associated_SNPs_1275 0 0 1 0 2 Ribosome 1 0.438775857718212 0.003517866134644 1 hPsi_site_7856 iPseU_CNN:0.003517866134644;iRNA_PseU:1 7857 chr15 73021961 73021961 1 + G A READ 73021978 + 73021958 73021998 41 TCGGCATTTACCAGAAGGCATTTGAACATCTTGGCAATGCA TCGACATTTACCAGAAGGCATTTGAACATCTTGGCAATGCA < 41bp 1 0.576165935183734 1 0.999893009662628 experiment 0.847668129632533 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BBS4 ENSG00000140463 CDS Human protein_coding chr15:73021978 chr15:73021961 nonsynonymous SNV 0.603 2 4 hPsi_associated_SNPs_1276 0 0 1 0 2 Ribosome 1 0.439963407295558 0.000213980674744096 1 hPsi_site_7857 iPseU_CNN:0.000213980674744096;iRNA_PseU:1 7858 chr2 171807862 171807862 1 + G A READ 171807858 + 171807838 171807878 41 TCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAA TCTGAAGATCTATTCAGCCTTATCAAAACACATGAAGCAAA < 41bp 1 0.321868161243459 1 0.532210826873779 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171807858 chr2:171807862 nonsynonymous SNV 0.997 2 25 hPsi_associated_SNPs_1277 0 0 1 0 1 Ribosome 1 0.528832608583662 0.935578346252442 0.942334782832676 hPsi_site_7858 iPseU_CNN:0.935578346252442;iRNA_PseU:0.942334782832676 7859 chr16 90001998 90001998 1 + G A READ 90001991 + 90001971 90002011 41 GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAG GCACGGCCATCCAGGAGCTGTTCAAGCACATCTCCGAGCAG < 41bp 1 0.614681864462549 1 0.999740362167358 experiment 0.770636271074901 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001991 chr16:90001998 nonsynonymous SNV 1.000 5 28 hPsi_associated_SNPs_1279 1 0 0 0 0 chromatin 1 0.481649367617398 0.000519275665284091 1 hPsi_site_7859 iPseU_CNN:0.000519275665284091;iRNA_PseU:1 7860 chr19 40883779 40883779 1 + C T SARC 40883773 + 40883753 40883793 41 CACAACAAGTACATGGTGACTGAACGCGCCACCTACATCGG CACAACAAGTACATGGTGACTGAACGTGCCACCTACATCGG < 41bp 1 0.105769982700745 1 0.999001264572144 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883773 chr19:40883779 synonymous SNV . 0 27 hPsi_associated_SNPs_1280 0 0 1 0 2 Endoplasmic reticulum 1 0.540680773192502 0.001997470855712 0.918638453614997 hPsi_site_7860 iPseU_CNN:0.001997470855712;iRNA_PseU:0.918638453614997 7861 chr1 114515911 114515911 1 + G A SARC 114515896 + 114515876 114515916 41 AACCAGCTCCATTGCTCATCTTTTCTCCCCACAGGGTTCCT AACCAGCTCCATTGCTCATCTTTTCTCCCCACAGGATTCCT < 41bp 1 0.38686393115674 1 0.99914288520813 experiment 1 Functional Loss NA| HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114515896 chr1:114515911 nonsynonymous SNV 0.998 3 36 hPsi_associated_SNPs_1281 0 0 1 0 0 Cytosol 1 0.935480749489528 0.00171422958374001 0.129038501020945 hPsi_site_7861 iPseU_CNN:0.00171422958374001;iRNA_PseU:0.129038501020945 7862 chr7 100470808 100470808 1 + G A SARC 100470817 + 100470797 100470837 41 TGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCTG TGTGGGCTGCTACTCTCCTCTGAGGGCGAGTGTCAGGGCTG < 41bp 1 0.124136046170095 1 0.781956195831299 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470817 chr7:100470808 synonymous SNV . 0 12 hPsi_associated_SNPs_1282 0 0 1 0 1 Ribosome 1 0.447216972728759 0.436087608337402 1 hPsi_site_7862 iPseU_CNN:0.436087608337402;iRNA_PseU:1 7863 chr7 16714117 16714117 1 + G T SARC 16714130 + 16714110 16714150 41 CCTTGAAGCTGTAGCCAAATTTCTGGACTCTACAGGCTCAA CCTTGAATCTGTAGCCAAATTTCTGGACTCTACAGGCTCAA < 41bp 1 0.419900711161234 1 0.998358964920044 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BZW2 ENSG00000136261 CDS Human protein_coding chr7:16714130 chr7:16714117 nonsynonymous SNV 1.000 3 8 hPsi_associated_SNPs_1283 0 0 1 0 2 Ribosome 1 0.438743553096309 0.00328207015991211 1 hPsi_site_7863 iPseU_CNN:0.00328207015991211;iRNA_PseU:1 7864 chr11 120343776 120343776 1 + G T SARC 120343788 + 120343768 120343808 41 GATTATCAGCGTCGCCTTGATACCTCCAGCCTGAAGTTGTC GATTATCATCGTCGCCTTGATACCTCCAGCCTGAAGTTGTC < 41bp 1 0.631443033390197 1 0.998838424682617 experiment 0.737113933219606 Functional Loss NA| ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120343788 chr11:120343776 nonsynonymous SNV 0.997 4 9 hPsi_associated_SNPs_1284 0 0 1 0 1 Cytosol 1 0.439463211739039 0.00232315063476607 1 hPsi_site_7864 iPseU_CNN:0.00232315063476607;iRNA_PseU:1 7865 chr17 42266536 42266536 1 + G T SARC 42266527 + 42266507 42266547 41 AGCTTGGCTCTCTACCTACGTAGCAGACAGCGGTAGCAACC AGCTTGGCTCTCTACCTACGTAGCAGACATCGGTAGCAACC < 41bp 1 0.371683134193711 1 0.999678373336792 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266527 chr17:42266536 nonsynonymous SNV 0.998 2 30 hPsi_associated_SNPs_1285 0 0 0 0 0 Endoplasmic reticulum 1 0.438735867623624 0.000643253326416016 1 hPsi_site_7865 iPseU_CNN:0.000643253326416016;iRNA_PseU:1 not specified not specified 7866 chr11 93862535 93862535 1 + G T SARC 93862521 + 93862501 93862541 41 CGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGAGCCCACG CGGAGTACGTGTTCTCGGATTTCTTGCTGAAGGATCCCACG < 41bp 1 0.337295693784265 1 0.999838471412659 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PANX1 ENSG00000110218 CDS Human protein_coding chr11:93862521 chr11:93862535 nonsynonymous SNV 0.998 1 35 hPsi_associated_SNPs_1286 0 0 1 0 0 Endoplasmic reticulum 1 0.438729408059787 0.000323057174681951 1 hPsi_site_7866 iPseU_CNN:0.000323057174681951;iRNA_PseU:1 7867 chr19 1924277 1924277 1 + G T SARC 1924281 + 1924261 1924301 41 CGGGCAGTGGCCAGTGGCCTTAGAGGGAGCCTGCCCTGCCC CGGGCAGTGGCCAGTGTCCTTAGAGGGAGCCTGCCCTGCCC < 41bp 1 0.542868330658849 1 0.999866724014282 experiment 0.914263338682301 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCAMP4 ENSG00000227500 CDS Human protein_coding chr19:1924281 chr19:1924277 nonsynonymous SNV 0.217 3 17 hPsi_associated_SNPs_1287 0 0 1 0 0 Ribosome 1 0.438723174530737 0.000266551971435991 1 hPsi_site_7867 iPseU_CNN:0.000266551971435991;iRNA_PseU:1 7868 chr1 226027697 226027697 1 + G T SARC 226027678 + 226027658 226027698 41 CCGTCAAGGAGAAGGTATTCTACAGCCTGATGAGGGAGAGC CCGTCAAGGAGAAGGTATTCTACAGCCTGATGAGGGAGATC < 41bp 1 0.360846819292533 1 0.963716983795166 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027678 chr1:226027697 nonsynonymous SNV 0.996 1 40 hPsi_associated_SNPs_1288 0 0 1 0 1 Endoplasmic reticulum 1 0.494569612747782 0.072566032409668 1 hPsi_site_7868 iPseU_CNN:0.072566032409668;iRNA_PseU:1 7869 chr17 73820437 73820437 1 + G T SARC 73820434 + 73820414 73820454 41 ACACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT ACACGCTGCGCTGTGTGAGCTCTTCGCTGAGGGCAGCGAGT < 41bp 1 0.207304520310337 1 0.998893976211548 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNK ENSG00000132478 CDS Human protein_coding chr17:73820434 chr17:73820437 nonsynonymous SNV 0.976 3 24 hPsi_associated_SNPs_1289 0 0 1 0 1 Cytosol 1 0.459811435453905 0.00221204757690407 1 hPsi_site_7869 iPseU_CNN:0.00221204757690407;iRNA_PseU:1 7870 chr19 39976414 39976414 1 + G T SARC 39976431 + 39976411 39976451 41 GGAGCTCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGT GGATCTCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGT < 41bp 1 0.283489505573082 1 0.955629467964172 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39976431 chr19:39976414 nonsynonymous SNV 0.830 3 4 hPsi_associated_SNPs_1290 0 0 1 0 2 Ribosome 1 0.438768386046185 0.0887410640716559 1 hPsi_site_7870 iPseU_CNN:0.0887410640716559;iRNA_PseU:1 7871 chrX 19373569 19373569 1 + G T SARC 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATCGCTATGGAATGGGAACGTCTGTTGAGAGATCGGCAGCC < 41bp 1 0.193949019106943 1 0.999129951000214 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373569 nonsynonymous SNV 0.997 2 33 hPsi_associated_SNPs_1291 0 0 1 0 0 Ribosome 1 0.438713603932655 0.00174009799957209 1 hPsi_site_7871 iPseU_CNN:0.00174009799957209;iRNA_PseU:1 7872 chr19 36220975 36220975 1 + G T SARC 36220991 + 36220971 36221011 41 TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT TCCATGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT < 41bp 1 0.250113644919961 1 0.948684334754944 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36220991 chr19:36220975 nonsynonymous SNV 0.997 3 5 hPsi_associated_SNPs_1292 0 0 1 0 1 chromatin 1 0.438716580966678 0.102631330490112 1 hPsi_site_7872 iPseU_CNN:0.102631330490112;iRNA_PseU:1 7873 chr4 54257180 54257180 1 + T A SARC 54257193 + 54257173 54257213 41 TAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAAT TAGGTGCAGATCTTTCTGATTATTTTAATTATGGGTTTAAT < 41bp 1 0.255375850781603 1 0.999068021774292 experiment 1 Functional Loss NA| FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257193 chr4:54257180 synonymous SNV . 0 8 hPsi_associated_SNPs_1293 0 0 1 0 1 Nucleus 1 0.940075318623985 0.00186395645141602 0.119849362752031 hPsi_site_7873 iPseU_CNN:0.00186395645141602;iRNA_PseU:0.119849362752031 7874 chr11 46405027 46405027 1 + G T SARC 46405042 + 46405022 46405062 41 AGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCC AGAAATGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCC < 41bp 1 0.371235097468755 1 0.999966859817505 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46405042 chr11:46405027 nonsynonymous SNV 0.999 3 6 hPsi_associated_SNPs_1294 0 0 1 4 1 Ribosome 1 0.438719011505024 6.62803649900123e-05 1 hPsi_site_7874 iPseU_CNN:6.62803649900123e-05;iRNA_PseU:1 7875 chr17 7611316 7611316 1 + G C SARC 7611309 + 7611289 7611329 41 GGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAGA GGTGGTTATGTGCTGTACCCTCAGATCCGGGACCGGCTAGA < 41bp 1 0.133489840826194 1 0.994941711425781 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611309 chr17:7611316 nonsynonymous SNV 1.000 5 28 hPsi_associated_SNPs_1295 0 0 0 0 1 exosome 1 0.43882881483451 0.0101165771484379 1 hPsi_site_7875 iPseU_CNN:0.0101165771484379;iRNA_PseU:1 7876 chr1 235594072 235594072 1 + G A SARC 235594083 + 235594063 235594103 41 ACGCTTTCTGTACTGAAGGTTTTAGTCCTCAATCAAACAGG ACGCTTTCTATACTGAAGGTTTTAGTCCTCAATCAAACAGG < 41bp 1 0.48806298765526 1 0.999888300895691 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235594083 chr1:235594072 nonsynonymous SNV 0.283 0 10 hPsi_associated_SNPs_1296 0 0 1 0 2 chromatin 1 0.52389542504004 0.000223398208617942 0.952209149919919 hPsi_site_7876 iPseU_CNN:0.000223398208617942;iRNA_PseU:0.952209149919919 7877 chr11 71943350 71943350 1 + A T SARC 71943358 + 71943338 71943378 41 TTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACGGCT TTGTGAATTGTCTCCTCACCTCGGGAAATGAGAAGACGGCT < 41bp 1 0.0385933699122018 1 0.986071050167084 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71943358 chr11:71943350 nonsynonymous SNV 0.942 5 13 hPsi_associated_SNPs_1298 0 0 1 0 2 Cytosol 1 0.614384299075751 0.0278578996658321 0.771231401848499 hPsi_site_7877 iPseU_CNN:0.0278578996658321;iRNA_PseU:0.771231401848499 7878 chr1 93720069 93720069 1 + G T SARC 93720071 + 93720051 93720091 41 ACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAA ACAAAATGCTAAAGAACATCTTCGAGAAAAAGAGTTTATAA < 41bp 1 0.173163491668831 1 0.999454379081726 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93720071 chr1:93720069 nonsynonymous SNV 0.995 3 19 hPsi_associated_SNPs_1299 0 0 0 0 0 chromatin 1 0.437686333571827 0.00109124183654807 1 hPsi_site_7878 iPseU_CNN:0.00109124183654807;iRNA_PseU:1 7879 chr17 78079630 78079630 1 + G T SARC 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGGCACCGTCCCCACTCTACATCGTGGAGTTCTCCG < 41bp 1 0.29685246087429 1 0.996023893356323 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079630 nonsynonymous SNV 0.951 1 27 hPsi_associated_SNPs_1300 0 0 1 0 2 Endoplasmic reticulum 1 0.438707155562785 0.00795221328735396 1 hPsi_site_7879 iPseU_CNN:0.00795221328735396;iRNA_PseU:1 7880 chrX 47101012 47101012 1 + C T SKCM 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATGACTCTCAGGAGCTGCTGTCATTCTTCCTGGACGGGCTG < 41bp 1 0.439592626496022 1 0.993057548999786 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47101012 nonsynonymous SNV 0.991 4 27 hPsi_associated_SNPs_1301 0 0 1 0 2 cytosol 1 0.438718619875907 0.0138849020004279 1 hPsi_site_7880 iPseU_CNN:0.0138849020004279;iRNA_PseU:1 7881 chr15 43452952 43452952 1 + C T SKCM 43452932 + 43452912 43452952 41 ATATTTTCTGTTCAAGAGAATAATCATCTCAGTTTTGATCC ATATTTTCTGTTCAAGAGAATAATCATCTCAGTTTTGATCT < 41bp 1 0.632122882795028 1 0.983104467391968 experiment 0.735754234409944 Functional Loss NA| TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43452932 chr15:43452952 nonsynonymous SNV 0.672 1 41 hPsi_associated_SNPs_1302 0 0 0 0 2 chromatin 1 0.438604254321182 0.033791065216064 1 hPsi_site_7881 iPseU_CNN:0.033791065216064;iRNA_PseU:1 7882 chr9 36083436 36083436 1 + G C SKCM 36083425 + 36083405 36083445 41 CCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTC CCGAGAATACTGTCAAGCCATTTTTCGAACACACTCTTCTC < 41bp 1 0.678332877648899 1 0.977425634860992 experiment 0.643334244702201 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RECK ENSG00000122707 CDS Human protein_coding chr9:36083425 chr9:36083436 nonsynonymous SNV 1.000 3 32 hPsi_associated_SNPs_1304 0 0 0 0 1 exosome 1 0.445672724008212 0.045148730278016 1 hPsi_site_7882 iPseU_CNN:0.045148730278016;iRNA_PseU:1 7883 chr1 1417956 1417956 1 + C T SKCM 1417953 + 1417933 1417973 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCTGTGCCTTTGTGACAGAC < 41bp 1 0.607985610297317 1 0.99093234539032 experiment 0.784028779405366 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417953 chr1:1417956 nonsynonymous SNV 0.989 3 24 hPsi_associated_SNPs_1305 0 0 1 0 2 Ribosome 1 0.440013168790383 0.0181353092193599 1 hPsi_site_7883 iPseU_CNN:0.0181353092193599;iRNA_PseU:1 7884 chr7 2409115 2409115 1 + C T SKCM 2409131 + 2409111 2409151 41 TTTTCTTGGTCTCCTGGTGGTAACATAATCGCCTTCTGGGT TTTTTTTGGTCTCCTGGTGGTAACATAATCGCCTTCTGGGT < 41bp 1 0.618374372250581 1 0.999904274940491 experiment 0.763251255498838 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2409131 chr7:2409115 nonsynonymous SNV 1.000 1 5 hPsi_associated_SNPs_1306 0 0 1 0 1 Ribosome 1 0.5306973698026 0.000191450119018111 0.938605260394801 hPsi_site_7884 iPseU_CNN:0.000191450119018111;iRNA_PseU:0.938605260394801 7885 chr22 20759862 20759862 1 + C T SKCM 20759850 + 20759830 20759870 41 CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTCAGGT CATGGTCTGGGACGTCCCTGTAGAGGAATTCCTCCTCAGGT < 41bp 1 0.601238750628974 1 0.999468386173248 experiment 0.797522498742053 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20759850 chr22:20759862 nonsynonymous SNV 0.001 0 33 hPsi_associated_SNPs_1307 0 0 0 0 0 Cytosol 1 0.438732027679377 0.00106322765350408 1 hPsi_site_7885 iPseU_CNN:0.00106322765350408;iRNA_PseU:1 7886 chr17 7611307 7611307 1 + C T SKCM 7611309 + 7611289 7611329 41 GGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAGA GGTGGTTATGTGCTGTACTCTCAGATCGGGGACCGGCTAGA < 41bp 1 0.46323649740881 1 0.996203482151031 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611309 chr17:7611307 nonsynonymous SNV 0.991 5 19 hPsi_associated_SNPs_1309 0 0 1 0 1 exosome 1 0.469963017100668 0.0075930356979379 1 hPsi_site_7886 iPseU_CNN:0.0075930356979379;iRNA_PseU:1 7887 chr4 160275040 160275040 1 + C A SKCM 160275023 + 160275003 160275043 41 AGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAGACTCAGA AGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAGACTAAGA < 41bp 1 0.553236275018441 1 0.708627581596375 experiment 0.893527449963119 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160275023 chr4:160275040 stopgain 1.000 1 38 hPsi_associated_SNPs_1311 0 0 1 0 0 Cytosol 1 0.466887029201859 0.58274483680725 1 hPsi_site_7887 iPseU_CNN:0.58274483680725;iRNA_PseU:1 7888 chrX 47100988 47100988 1 + G A SKCM 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATAACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG < 41bp 1 0.333058165586529 1 0.982643246650696 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47100988 nonsynonymous SNV 1.000 4 3 hPsi_associated_SNPs_1312 0 0 1 0 1 cytosol 1 0.438719865387381 0.034713506698608 1 hPsi_site_7888 iPseU_CNN:0.034713506698608;iRNA_PseU:1 7889 chr6 17543158 17543158 1 + C T SKCM 17543174 + 17543154 17543194 41 TATTCAGATAAAAGGGAAAGTAAACTCCATTATAATTGGTA TATTTAGATAAAAGGGAAAGTAAACTCCATTATAATTGGTA < 41bp 1 0.506522836873411 1 0.161131948232651 experiment 0.986954326253178 Functional Loss NA| CAP2 ENSG00000112186 CDS Human protein_coding chr6:17543174 chr6:17543158 stopgain 0.934 1 5 hPsi_associated_SNPs_1313 0 0 0 2 2 exosome 1 0.451072789718796 1 1 hPsi_site_7889 iPseU_CNN:1;iRNA_PseU:1 7890 chr20 2840755 2840755 1 + C T SKCM 2840762 + 2840742 2840782 41 TGAGGCCAGTGCTCGATATATACTCTGCTTCCGGCATGCCT TGAGGCCAGTGCTTGATATATACTCTGCTTCCGGCATGCCT < 41bp 1 0.672488286805463 1 0.99973064661026 experiment 0.655023426389075 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840762 chr20:2840755 synonymous SNV . 0 14 hPsi_associated_SNPs_1314 0 0 1 0 2 chromatin 1 0.438273210463488 0.00053870677947998 1 hPsi_site_7890 iPseU_CNN:0.00053870677947998;iRNA_PseU:1 7891 chr6 348904 348904 1 + C T SKCM 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCGGTGGAGCAGTTTTTCGGCACTGGCTCCGCTG < 41bp 1 0.612681958307963 1 0.999982953071594 experiment 0.774636083384075 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348904 nonsynonymous SNV 0.002 0 24 hPsi_associated_SNPs_1315 0 0 1 0 0 Ribosome 1 0.462870887409024 3.40938568119675e-05 1 hPsi_site_7891 iPseU_CNN:3.40938568119675e-05;iRNA_PseU:1 7892 chr11 489449 489449 1 + C T SKCM 489437 + 489417 489457 41 TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTTGCTTCGAG < 41bp 1 0.669921325365666 1 0.999896287918091 experiment 0.660157349268667 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489437 chr11:489449 nonsynonymous SNV 0.925 3 33 hPsi_associated_SNPs_1316 0 0 1 0 2 Ribosome 1 0.440372098334286 0.000207424163817915 1 hPsi_site_7892 iPseU_CNN:0.000207424163817915;iRNA_PseU:1 7893 chr1 116930806 116930806 1 + C G SKCM 116930810 + 116930790 116930830 41 TAACTGGTTGCTTCTCCTACTATCAAGAAGCTAAAAGTTCA TAACTGGTTGCTTCTCGTACTATCAAGAAGCTAAAAGTTCA < 41bp 1 0.609675680949895 1 0.999951303005219 experiment 0.78064863810021 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116930810 chr1:116930806 synonymous SNV . 0 17 hPsi_associated_SNPs_1317 0 0 1 0 2 Nucleus 1 0.439630282583352 9.73939895621001e-05 1 hPsi_site_7893 iPseU_CNN:9.73939895621001e-05;iRNA_PseU:1 7894 chr15 99903388 99903388 1 + C T SKCM 99903391 + 99903371 99903411 41 CTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACC CTCTGGGGCACTGTCATTGGTGTAGTGAGCCTATGTTTACC < 41bp 1 0.556704371069862 1 0.999200820922852 experiment 0.886591257860277 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99903391 chr15:99903388 nonsynonymous SNV 0.994 3 18 hPsi_associated_SNPs_1318 0 0 0 2 1 Cytosol 1 0.438718593189429 0.00159835815429599 1 hPsi_site_7894 iPseU_CNN:0.00159835815429599;iRNA_PseU:1 7895 chr17 41345540 41345540 1 + C T SKCM 41345535 + 41345515 41345555 41 TCTCACAAAGGCCAGCAATTTGGGCCTCGGGTCTGGTGCAG TCTCACAAAGGCCAGCAATTTGGGCTTCGGGTCTGGTGCAG < 41bp 1 0.397412070409249 1 0.994925737380981 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345535 chr17:41345540 nonsynonymous SNV 0.995 4 26 hPsi_associated_SNPs_1319 0 0 1 0 0 Cytosol 1 0.506381633117375 0.010148525238038 0.987236733765249 hPsi_site_7895 iPseU_CNN:0.010148525238038;iRNA_PseU:0.987236733765249 Primary hyperoxaluria, type III Primary hyperoxaluria, type III 7896 chr11 60609702 60609702 1 + C T SKCM 60609706 + 60609686 60609726 41 GGGCCCTTGTGGAGTTCGAGTCGAACCCAGAAGAAACGAGG GGGCCCTTGTGGAGTTTGAGTCGAACCCAGAAGAAACGAGG < 41bp 1 0.222383337295289 1 0.998645305633545 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60609706 chr11:60609702 stopgain . 0 17 hPsi_associated_SNPs_1324 0 0 1 0 0 Ribosome 1 0.438891770398256 0.00270938873290993 1 hPsi_site_7896 iPseU_CNN:0.00270938873290993;iRNA_PseU:1 7897 chr16 30745866 30745866 1 + C T SKCM 30745848 + 30745828 30745868 41 AGAGCTGTTTGATATGCCCCTGGAGGAACCTTCTAGCTCAT AGAGCTGTTTGATATGCCCCTGGAGGAACCTTCTAGCTTAT < 41bp 1 0.52316307006596 1 0.893858075141907 experiment 0.953673859868081 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SRCAP ENSG00000080603 CDS Human protein_coding chr16:30745848 chr16:30745866 nonsynonymous SNV 0.999 1 39 hPsi_associated_SNPs_1326 0 0 1 0 2 Ribosome 1 0.438718592962824 0.212283849716186 1 hPsi_site_7897 iPseU_CNN:0.212283849716186;iRNA_PseU:1 7898 chr1 40205917 40205917 1 + C T SKCM 40205909 + 40205889 40205929 41 TTTTGGAGACATCACAGATATTCAGATTCCTCTGGATTATG TTTTGGAGACATCACAGATATTCAGATTTCTCTGGATTATG < 41bp 1 0.659847700007009 1 0.348902076482773 experiment 0.680304599985983 Functional Loss NA| PPIE ENSG00000084072 CDS Human protein_coding chr1:40205909 chr1:40205917 nonsynonymous SNV 0.994 3 29 hPsi_associated_SNPs_1328 0 0 1 0 2 Ribosome 1 0.438718632769527 1 1 hPsi_site_7898 iPseU_CNN:1;iRNA_PseU:1 7899 chr6 31931203 31931203 1 + C T SKCM 31931212 + 31931192 31931232 41 GGCTGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACC GGCTGAAGCGTTGTCAGATCTATGTGATTAGCACTGTAACC < 41bp 1 0.538927887868795 1 0.995325922966003 experiment 0.92214422426241 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31931212 chr6:31931203 nonsynonymous SNV 0.987 4 12 hPsi_associated_SNPs_1330 0 0 1 0 1 chromatin 1 0.438718588711338 0.00934815406799405 1 hPsi_site_7899 iPseU_CNN:0.00934815406799405;iRNA_PseU:1 7900 chr5 76029089 76029089 1 + G A SKCM 76029101 + 76029081 76029121 41 CCACCACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC CCACCACAAAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC < 41bp 1 0.322039339224582 1 0.999150395393372 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control F2R ENSG00000181104 CDS Human protein_coding chr5:76029101 chr5:76029089 nonsynonymous SNV 0.952 4 9 hPsi_associated_SNPs_1332 0 0 1 0 0 Endoplasmic reticulum 1 0.438765349878915 0.00169920921325595 1 hPsi_site_7900 iPseU_CNN:0.00169920921325595;iRNA_PseU:1 7901 chr18 77894554 77894554 1 + C T SKCM 77894552 + 77894532 77894572 41 ACCTGTTGGGCCTGGTGTTCTTCCTGTGAGCCCCTCTGTCA ACCTGTTGGGCCTGGTGTTCTTTCTGTGAGCCCCTCTGTCA < 41bp 1 0.414732712345107 1 0.995392322540283 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894552 chr18:77894554 nonsynonymous SNV 0.286 3 23 hPsi_associated_SNPs_1333 0 0 1 0 0 Cytosol 1 0.429426101574755 0.00921535491943404 1 hPsi_site_7901 iPseU_CNN:0.00921535491943404;iRNA_PseU:1 7902 chrX 128692637 128692637 1 + C T SKCM 128692622 + 128692602 128692642 41 TCTTTCAGGGCTTCTTGGATTTGAAGACAATTTTTCTTCTA TCTTTCAGGGCTTCTTGGATTTGAAGACAATTTTTTTTCTA < 41bp 1 0.553043356532003 1 0.994596719741821 experiment 0.893913286935994 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock OCRL ENSG00000122126 CDS Human protein_coding chrX:128692622 chrX:128692637 nonsynonymous SNV 0.998 2 36 hPsi_associated_SNPs_1334 0 0 1 0 2 Cytosol 1 0.64138942298088 0.0108065605163581 0.71722115403824 hPsi_site_7902 iPseU_CNN:0.0108065605163581;iRNA_PseU:0.71722115403824 7903 chr2 172585288 172585288 1 + C T SKCM 172585268 + 172585248 172585288 41 AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCC AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCT < 41bp 1 0.279628990011324 1 0.98865669965744 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172585268 chr2:172585288 nonsynonymous SNV 1.000 1 41 hPsi_associated_SNPs_1335 0 0 0 0 2 Cytosol 1 0.438860357565335 0.0226866006851201 1 hPsi_site_7903 iPseU_CNN:0.0226866006851201;iRNA_PseU:1 7904 chr11 122669681 122669681 1 + C T SKCM 122669678 + 122669658 122669698 41 TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTC TTATTAGAGAGCAATACCATTATTGATCATGTCTATTGCTC < 41bp 1 0.570328475576694 1 0.554948031902313 experiment 0.859343048846612 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122669678 chr11:122669681 synonymous SNV . 0 24 hPsi_associated_SNPs_1336 0 0 0 0 2 Ribosome 1 0.438922937517975 0.890103936195374 1 hPsi_site_7904 iPseU_CNN:0.890103936195374;iRNA_PseU:1 7905 chr6 17507930 17507930 1 + A G SKCM 17507922 + 17507902 17507942 41 ATGAATGACGCTGCCACCTTTTACACTAACAGGGTCTTAAA ATGAATGACGCTGCCACCTTTTACACTAGCAGGGTCTTAAA < 41bp 1 0.688856588811666 1 0.988959491252899 experiment 0.622286822376668 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAP2 ENSG00000112186 CDS Human protein_coding chr6:17507922 chr6:17507930 nonsynonymous SNV 1.000 4 29 hPsi_associated_SNPs_1338 0 0 1 3 2 exosome 1 0.48628467303275 0.0220810174942021 1 hPsi_site_7905 iPseU_CNN:0.0220810174942021;iRNA_PseU:1 7906 chr17 37357520 37357520 1 + G A SKCM 37357531 + 37357511 37357551 41 TGGCAAGAAGAAGGTCTGGTTAGACCCCAATGAGACCAATG TGGCAAGAAAAAGGTCTGGTTAGACCCCAATGAGACCAATG < 41bp 1 0.612805995630163 1 0.850121140480042 experiment 0.774388008739675 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357531 chr17:37357520 synonymous SNV . 0 10 hPsi_associated_SNPs_1339 0 0 1 0 2 chromatin 1 0.783012216236642 0.299757719039916 0.433975567526715 hPsi_site_7906 iPseU_CNN:0.299757719039916;iRNA_PseU:0.433975567526715 7907 chr6 80877461 80877461 1 + C T SKCM 80877445 + 80877425 80877465 41 GTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTC GTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGTGGTC < 41bp 1 0.592360290981999 1 0.998660087585449 experiment 0.815279418036002 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BCKDHB ENSG00000083123 CDS Human protein_coding chr6:80877445 chr6:80877461 nonsynonymous SNV 0.866 5 37 hPsi_associated_SNPs_1340 1 0 1 0 2 Ribosome 1 0.692962608032914 0.00267982482910201 0.614074783934171 hPsi_site_7907 iPseU_CNN:0.00267982482910201;iRNA_PseU:0.614074783934171 7908 chr22 45571921 45571921 1 + C T SKCM 45571919 + 45571899 45571939 41 ACATAACCAGTGCCCCTCCCTTCGCCAGTGCAAAGGCAGCG ACATAACCAGTGCCCCTCCCTTTGCCAGTGCAAAGGCAGCG < 41bp 1 0.270941092151153 1 0.945555925369263 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUP50 ENSG00000093000 CDS Human protein_coding chr22:45571919 chr22:45571921 synonymous SNV . 0 23 hPsi_associated_SNPs_1341 0 0 1 0 1 Ribosome 1 0.438718593258649 0.108888149261474 1 hPsi_site_7908 iPseU_CNN:0.108888149261474;iRNA_PseU:1 7909 chr2 85866413 85866413 1 + C T SKCM 85866431 + 85866411 85866451 41 ACCTTCCTACTGCCCCCCTCTACAAGGACGAGAAGGAGCAG ACTTTCCTACTGCCCCCCTCTACAAGGACGAGAAGGAGCAG < 41bp 1 0.408326587040793 1 0.999139904975891 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP39 ENSG00000168883 CDS Human protein_coding chr2:85866431 chr2:85866413 nonsynonymous SNV 0.331 4 3 hPsi_associated_SNPs_1342 0 0 1 0 1 Cytosol 1 0.715249950191801 0.001720190048218 0.569500099616397 hPsi_site_7909 iPseU_CNN:0.001720190048218;iRNA_PseU:0.569500099616397 7910 chr1 224340938 224340938 1 + C T SKCM 224340958 + 224340938 224340978 41 CCTCTATGGCAATGGAGTACTTTGATGAAAAGATTGTTCCA TCTCTATGGCAATGGAGTACTTTGATGAAAAGATTGTTCCA < 41bp 1 0.159967412564673 1 0.996089696884155 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FBXO28 ENSG00000143756 CDS Human protein_coding chr1:224340958 chr1:224340938 nonsynonymous SNV 0.994 4 1 hPsi_associated_SNPs_1343 0 0 1 0 1 Cytosol 1 0.559750965506481 0.0078206062316899 0.880498068987039 hPsi_site_7910 iPseU_CNN:0.0078206062316899;iRNA_PseU:0.880498068987039 7911 chr16 28883930 28883930 1 + C T SKCM 28883910 + 28883890 28883930 41 CCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTCGATATGC CCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTCGATATGT < 41bp 1 0.44123335020107 1 0.999939262866974 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883910 chr16:28883930 nonsynonymous SNV 1.000 4 41 hPsi_associated_SNPs_1344 0 0 1 0 1 Cytosol 1 0.721645181570152 0.000121474266052024 0.556709636859697 hPsi_site_7911 iPseU_CNN:0.000121474266052024;iRNA_PseU:0.556709636859697 7912 chr8 145151983 145151983 1 + C T SKCM 145151971 + 145151951 145151991 41 ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTG ATGTCCCAGATAGCCAAGGATGTGTGCACCTTTCTGCGCTG < 41bp 1 0.412261937089642 1 0.313666254281998 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151971 chr8:145151983 synonymous SNV . 0 33 hPsi_associated_SNPs_1345 0 0 1 0 2 Ribosome 1 0.438748934262565 1 1 hPsi_site_7912 iPseU_CNN:1;iRNA_PseU:1 7913 chr17 7319288 7319288 1 + C T SKCM 7319308 + 7319288 7319328 41 CGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG TGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG < 41bp 1 0.424127448927414 1 0.999651551246643 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7319308 chr17:7319288 nonsynonymous SNV 0.046 1 1 hPsi_associated_SNPs_1346 0 0 0 0 0 chromatin 1 0.448905105769049 0.000696897506714089 1 hPsi_site_7913 iPseU_CNN:0.000696897506714089;iRNA_PseU:1 7914 chrX 19373555 19373555 1 + C T SKCM 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATCGCTATGGAATGGGAATGTCTGTTGAGAGAGCGGCAGCC < 41bp 1 0.294822700211953 1 0.999273896217346 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373555 nonsynonymous SNV 0.970 5 19 hPsi_associated_SNPs_1347 0 0 1 0 1 Ribosome 1 0.439318499655634 0.00145220756530806 1 hPsi_site_7914 iPseU_CNN:0.00145220756530806;iRNA_PseU:1 7915 chr1 215781439 215781439 1 + C T SKCM 215781433 + 215781413 215781453 41 TGATCTCTACTCAGCCAGGTTCTACTCCTTTAGCGTCATTC TGATCTCTACTCAGCCAGGTTCTACTTCTTTAGCGTCATTC < 41bp 1 0.457017271440633 1 0.999876618385315 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215781433 chr1:215781439 nonsynonymous SNV 0.999 4 27 hPsi_associated_SNPs_1348 0 0 1 0 2 Ribosome 1 0.438718882363223 0.000246763229369895 1 hPsi_site_7915 iPseU_CNN:0.000246763229369895;iRNA_PseU:1 7916 chr12 98992445 98992445 1 + C T SKCM 98992435 + 98992415 98992455 41 AGCCAGGTTATGCCAACACTTTGAGGGATGCAGCTCCCAAA AGCCAGGTTATGCCAACACTTTGAGGGATGTAGCTCCCAAA < 41bp 1 0.252344158636853 1 0.977769792079926 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992435 chr12:98992445 nonsynonymous SNV 0.969 0 31 hPsi_associated_SNPs_1349 0 0 1 0 0 Ribosome 1 0.506153734744261 0.044460415840148 0.987692530511477 hPsi_site_7916 iPseU_CNN:0.044460415840148;iRNA_PseU:0.987692530511477 7917 chr2 84518361 84518361 1 + G A SKCM 84518375 + 84518355 84518395 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGAATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.59349528097112 1 0.997094750404358 experiment 0.813009438057759 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518375 chr2:84518361 . . 0 7 hPsi_associated_SNPs_1350 0 0 0 0 0 unknown 1 0.438718678592335 0.00581049919128396 1 hPsi_site_7917 iPseU_CNN:0.00581049919128396;iRNA_PseU:1 7918 chr16 68330658 68330658 1 + C T SKCM 68330649 + 68330629 68330669 41 ATTGCCCTTTCTGGAGTCCCTTTCTACTTCATGGGTGTTTA ATTGCCCTTTCTGGAGTCCCTTTCTACTTTATGGGTGTTTA < 41bp 1 0.510274662516991 1 0.995394587516785 experiment 0.979450674966017 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330649 chr16:68330658 synonymous SNV . 0 30 hPsi_associated_SNPs_1351 0 0 1 0 1 Ribosome 1 0.440016000301806 0.00921082496643 1 hPsi_site_7918 iPseU_CNN:0.00921082496643;iRNA_PseU:1 7919 chr9 97843008 97843008 1 + G A SKCM 97843004 + 97842984 97843024 41 TCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAG TCGGTGGTGTGAACTCATTGTTAAACACAAGTTCACGAAAG < 41bp 1 0.088909916299867 1 0.98686295747757 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97843004 chr9:97843008 synonymous SNV . 0 25 hPsi_associated_SNPs_1353 0 0 1 0 2 Cytosol 1 0.519606588978613 0.02627408504486 0.960786822042774 hPsi_site_7919 iPseU_CNN:0.02627408504486;iRNA_PseU:0.960786822042774 7920 chr17 74740454 74740454 1 + G A SKCM 74740462 + 74740442 74740482 41 ATTAGCCTTGTGGGGACAGTTCTATTCTTTCTCATTCGGAA ATTAGCCTTGTGAGGACAGTTCTATTCTTTCTCATTCGGAA < 41bp 1 0.173798439223168 1 0.999990344047546 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74740462 chr17:74740454 nonsynonymous SNV 1.000 5 13 hPsi_associated_SNPs_1354 0 0 1 0 2 Endoplasmic reticulum 1 0.438674897580142 1.93119049078927e-05 1 hPsi_site_7920 iPseU_CNN:1.93119049078927e-05;iRNA_PseU:1 7921 chr14 21464435 21464435 1 + C T SKCM 21464416 + 21464396 21464436 41 TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCTC < 41bp 1 0.245346878188777 1 0.999921083450317 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464416 chr14:21464435 nonsynonymous SNV 0.880 2 40 hPsi_associated_SNPs_1355 0 0 1 0 1 Ribosome 1 0.712945969829293 0.000157833099365901 0.574108060341413 hPsi_site_7921 iPseU_CNN:0.000157833099365901;iRNA_PseU:0.574108060341413 7922 chr14 21464434 21464434 1 + C T SKCM 21464416 + 21464396 21464436 41 TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATTCC < 41bp 1 0.183287758076579 1 0.999932765960693 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464416 chr14:21464434 nonsynonymous SNV 0.861 1 39 hPsi_associated_SNPs_1356 0 0 1 0 1 Ribosome 1 0.434425086425917 0.000134468078613947 1 hPsi_site_7922 iPseU_CNN:0.000134468078613947;iRNA_PseU:1 7923 chr3 136046515 136046515 1 + C T SKCM 136046533 + 136046513 136046553 41 ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAG ACTTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAG < 41bp 1 0.158823743579137 1 0.999960005283356 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136046533 chr3:136046515 nonsynonymous SNV 0.999 5 3 hPsi_associated_SNPs_1357 0 0 1 0 2 Ribosome 1 0.939132580284329 7.99894332879081e-05 0.121734839431342 hPsi_site_7923 iPseU_CNN:7.99894332879081e-05;iRNA_PseU:0.121734839431342 7924 chr16 30664259 30664259 1 + T C SKCM 30664253 + 30664233 30664273 41 AGGCCTCCCGACCCTCTGTGTTTGTGTCGCGAGCCCTTGAG AGGCCTCCCGACCCTCTGTGTTTGTGCCGCGAGCCCTTGAG < 41bp 1 0.266279555442641 1 0.9925177693367 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664253 chr16:30664259 synonymous SNV . 0 27 hPsi_associated_SNPs_1358 0 0 1 0 1 Cytosol 1 0.601645910390524 0.0149644613266 0.796708179218952 hPsi_site_7924 iPseU_CNN:0.0149644613266;iRNA_PseU:0.796708179218952 7925 chr5 43628326 43628326 1 + G A SKCM 43628322 + 43628302 43628342 41 AGCTGCAGCTTTGGAACAGTTCAAGTCTCTTGGTGCTGAGC AGCTGCAGCTTTGGAACAGTTCAAATCTCTTGGTGCTGAGC < 41bp 1 0.195218784664811 1 0.999866127967834 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43628322 chr5:43628326 synonymous SNV . 0 25 hPsi_associated_SNPs_1359 0 0 1 0 1 Endoplasmic reticulum 1 0.625953589295454 0.000267744064331943 0.748092821409093 hPsi_site_7925 iPseU_CNN:0.000267744064331943;iRNA_PseU:0.748092821409093 7926 chr19 1434875 1434875 1 + C T SKCM 1434892 + 1434872 1434912 41 GAACCACAACGTGCAAGGGTTCCACCCCTACCGACGCTAGC GAATCACAACGTGCAAGGGTTCCACCCCTACCGACGCTAGC < 41bp 1 0.360053374882037 1 0.990486621856689 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434892 chr19:1434875 synonymous SNV . 0 4 hPsi_associated_SNPs_1360 0 0 1 0 0 chromatin 1 0.986669220128842 0.019026756286622 0.0266615597423152 hPsi_site_7926 iPseU_CNN:0.019026756286622;iRNA_PseU:0.0266615597423152 7927 chr16 14989377 14989377 1 + C T SKCM 14989392 + 14989372 14989412 41 TCATTCCTTTGCTGCTGCAGTTGACAAGCCGGCTACAGGGA TCATTTCTTTGCTGCTGCAGTTGACAAGCCGGCTACAGGGA < 41bp 1 0.141203481292122 1 0.996549844741821 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14989392 chr16:14989377 nonsynonymous SNV 0.990 3 6 hPsi_associated_SNPs_1361 0 0 1 0 1 Nucleus 1 0.447823072097309 0.00690031051635809 1 hPsi_site_7927 iPseU_CNN:0.00690031051635809;iRNA_PseU:1 7928 chr1 981167 981167 1 + G T SKCM 981180 + 981160 981200 41 ATGACGGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC ATGACGGTGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC < 41bp 1 0.26766770298984 1 0.913007199764252 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide AGRN ENSG00000188157 CDS Human protein_coding chr1:981180 chr1:981167 nonsynonymous SNV 0.583 4 8 hPsi_associated_SNPs_1362 0 0 1 0 2 Endoplasmic reticulum 1 0.438731716021524 0.173985600471496 1 hPsi_site_7928 iPseU_CNN:0.173985600471496;iRNA_PseU:1 7929 chr17 76395592 76395592 1 + C T SKCM 76395580 + 76395560 76395600 41 ACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAA ACCATCGGCCTCCAGCACATTAAGGTGTACCTTTTCGACAA < 41bp 1 0.164533111757967 1 0.999992489814758 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PGS1 ENSG00000087157 CDS Human protein_coding chr17:76395580 chr17:76395592 synonymous SNV . 0 33 hPsi_associated_SNPs_1363 0 0 1 0 1 chromatin 1 0.438948342939118 1.50203704840646e-05 1 hPsi_site_7929 iPseU_CNN:1.50203704840646e-05;iRNA_PseU:1 7930 chr1 1455959 1455959 1 + C T SKCM 1455956 + 1455936 1455976 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCTGTGCCTTTGTGACAGAC < 41bp 1 0.178357667608552 1 0.99093234539032 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1455956 chr1:1455959 nonsynonymous SNV 0.757 2 24 hPsi_associated_SNPs_1364 0 0 1 0 2 Ribosome 1 0.440013168790383 0.0181353092193599 1 hPsi_site_7930 iPseU_CNN:0.0181353092193599;iRNA_PseU:1 7931 chr1 29064819 29064819 1 + T A SKCM 29064803 + 29064783 29064823 41 CTGTACATCAAAAGGATGGATTAAACGATGATGATTTTGAA CTGTACATCAAAAGGATGGATTAAACGATGATGATTATGAA < 41bp 1 0.158158612155487 1 0.948394536972046 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29064803 chr1:29064819 nonsynonymous SNV 0.999 3 37 hPsi_associated_SNPs_1365 0 0 1 0 2 Cytosol 1 0.99999179159832 0.103210926055908 1.64168033605083e-05 hPsi_site_7931 iPseU_CNN:0.103210926055908;iRNA_PseU:1.64168033605083e-05 7932 chr21 45400909 45400909 1 + C T SKCM 45400922 + 45400902 45400942 41 CATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCGGAGGCCGT CATGTTTTCAGGGGAGCAGTTTAAGCCTGCCCGGAGGCCGT < 41bp 1 0.0438964502680446 1 0.999846577644348 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGPAT3 ENSG00000160216 CDS Human protein_coding chr21:45400922 chr21:45400909 nonsynonymous SNV 0.599 3 8 hPsi_associated_SNPs_1366 0 0 1 0 1 Endoplasmic reticulum 1 0.438714677369743 0.000306844711303933 1 hPsi_site_7932 iPseU_CNN:0.000306844711303933;iRNA_PseU:1 7933 chr20 62658990 62658990 1 + T G SKCM 62658974 + 62658954 62658994 41 AGTTGAAGAAGTGTCCCCACTCCACACCCCTGTGGCTTTTG AGTTGAAGAAGTGTCCCCACTCCACACCCCTGTGGCGTTTG < 41bp 1 0.0286863868796573 1 0.999383389949799 experiment 1 Functional Loss NA| PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62658974 chr20:62658990 nonsynonymous SNV 0.775 1 37 hPsi_associated_SNPs_1367 0 0 1 0 2 Cytosol 1 0.438727822379534 0.00123322010040194 1 hPsi_site_7933 iPseU_CNN:0.00123322010040194;iRNA_PseU:1 Mitochondrial myopathy and sideroblastic anemia Mitochondrial myopathy and sideroblastic anemia 7934 chr12 6969337 6969337 1 + C T SKCM 6969351 + 6969331 6969371 41 GGCCTTCTCTCCGGGGAGTATTCCAAGCCAGTACCGGAGTC GGCCTTTTCTCCGGGGAGTATTCCAAGCCAGTACCGGAGTC < 41bp 1 0.0203608596942661 1 0.950080513954163 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969351 chr12:6969337 nonsynonymous SNV 1.000 4 7 hPsi_associated_SNPs_1368 0 0 1 0 2 Nucleus 1 0.481013679295052 0.0998389720916739 1 hPsi_site_7934 iPseU_CNN:0.0998389720916739;iRNA_PseU:1 7935 chr5 82836397 82836397 1 + G A SKCM 82836401 + 82836381 82836421 41 TCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAA TCCAAGACCGTTTCAGAGAATTCGAGGATTCCACCTTAAAA < 41bp 1 0.119653762097219 1 0.99993908405304 experiment 1 Functional Loss NA| VCAN ENSG00000038427 CDS Human protein_coding chr5:82836401 chr5:82836397 synonymous SNV . 0 17 hPsi_associated_SNPs_1369 0 0 1 0 0 Ribosome 1 0.438718593477091 0.00012183189392001 1 hPsi_site_7935 iPseU_CNN:0.00012183189392001;iRNA_PseU:1 7936 chr5 82836398 82836398 1 + G A SKCM 82836401 + 82836381 82836421 41 TCCAAGACCGTTTCAGGGAATTCGAGGATTCCACCTTAAAA TCCAAGACCGTTTCAGGAAATTCGAGGATTCCACCTTAAAA < 41bp 1 0.1162377918759 1 0.999967694282532 experiment 1 Functional Loss NA| VCAN ENSG00000038427 CDS Human protein_coding chr5:82836401 chr5:82836398 nonsynonymous SNV 0.001 0 18 hPsi_associated_SNPs_1370 0 0 1 0 0 Ribosome 1 0.438726086682319 6.46114349360793e-05 1 hPsi_site_7936 iPseU_CNN:6.46114349360793e-05;iRNA_PseU:1 7937 chr16 29982856 29982856 1 + C T SKCM 29982849 + 29982829 29982869 41 CGCGCCGGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGG CGCGCCGGGAGTCCCACTGGTCTAGAATCCGGCTCTGAGGG < 41bp 1 0.205019768686847 1 0.998776137828827 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29982849 chr16:29982856 nonsynonymous SNV 0.999 1 28 hPsi_associated_SNPs_1371 0 0 1 0 1 Cytosol 1 0.439065578427097 0.00244772434234597 1 hPsi_site_7937 iPseU_CNN:0.00244772434234597;iRNA_PseU:1 7938 chr16 29982857 29982857 1 + C T SKCM 29982849 + 29982829 29982869 41 CGCGCCGGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGG CGCGCCGGGAGTCCCACTGGTCTAGAACTCGGCTCTGAGGG < 41bp 1 0.0410659507090172 1 0.988223433494568 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29982849 chr16:29982857 synonymous SNV . 0 29 hPsi_associated_SNPs_1372 0 0 1 0 1 Cytosol 1 0.438718968928689 0.023553133010864 1 hPsi_site_7938 iPseU_CNN:0.023553133010864;iRNA_PseU:1 7939 chr12 102558309 102558309 1 + C T SKCM 102558298 + 102558278 102558318 41 TGACCTGGCTGTGGCTTATATTCTCAATATTCCTGATAGAG TGACCTGGCTGTGGCTTATATTCTCAATATTTCTGATAGAG < 41bp 1 0.0277575843290464 1 0.969057679176331 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PARPBP ENSG00000185480 CDS Human protein_coding chr12:102558298 chr12:102558309 nonsynonymous SNV 1.000 4 32 hPsi_associated_SNPs_1373 0 0 1 0 2 chromatin 1 0.439629655810198 0.061884641647338 1 hPsi_site_7939 iPseU_CNN:0.061884641647338;iRNA_PseU:1 7940 chr2 32667449 32667449 1 + C T SKCM 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACATTGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA < 41bp 1 0.260275988481813 1 0.968221664428711 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667449 synonymous SNV . 0 5 hPsi_associated_SNPs_1374 0 0 1 0 2 Nucleus 1 0.440550338413804 0.0635566711425779 1 hPsi_site_7940 iPseU_CNN:0.0635566711425779;iRNA_PseU:1 7941 chr3 160945056 160945056 1 + T C SKCM 160945072 + 160945052 160945092 41 GAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT GAACCTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT < 41bp 1 0.167200202527887 1 0.989964246749878 experiment 1 Functional Loss NA| NMD3 ENSG00000169251 CDS Human protein_coding chr3:160945072 chr3:160945056 synonymous SNV . 0 5 hPsi_associated_SNPs_1375 0 0 1 0 2 Nucleus 1 0.541770616464981 0.0200715065002439 0.916458767070038 hPsi_site_7941 iPseU_CNN:0.0200715065002439;iRNA_PseU:0.916458767070038 7942 chr11 47074006 47074006 1 + C T SKCM 47074021 + 47074001 47074041 41 CCCCCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGA CCCCCTACAATAGGGTATCATTTTTACGGGCCTTCTGGAGA < 41bp 1 0.110711427486865 1 0.998818159103394 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47074021 chr11:47074006 nonsynonymous SNV 0.988 3 6 hPsi_associated_SNPs_1376 0 0 1 0 2 chromatin 1 0.438719491074911 0.002363681793212 1 hPsi_site_7942 iPseU_CNN:0.002363681793212;iRNA_PseU:1 7943 chrX 133632681 133632681 1 + C T SKCM 133632671 + 133632651 133632691 41 AATTCCAGACAAGTTTGTTGTAGGATATGCCCTTGACTATA AATTCCAGACAAGTTTGTTGTAGGATATGCTCTTGACTATA < 41bp 1 0.316530576446819 1 0.999942660331726 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133632671 chrX:133632681 synonymous SNV . 0 31 hPsi_associated_SNPs_1377 0 0 1 0 2 Cytosol 1 0.438719954128244 0.000114679336548074 1 hPsi_site_7943 iPseU_CNN:0.000114679336548074;iRNA_PseU:1 7944 chr15 91496480 91496480 1 + C T SKCM 91496497 + 91496477 91496517 41 TGCCGGGGGCTTGGCCATGCTTACCTCCATGCGGCCCACGC TGCTGGGGGCTTGGCCATGCTTACCTCCATGCGGCCCACGC < 41bp 1 0.282617677293936 1 0.999980807304382 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNC45A ENSG00000140553 CDS Human protein_coding chr15:91496497 chr15:91496480 synonymous SNV . 0 4 hPsi_associated_SNPs_1378 0 0 1 0 2 Nucleus 1 0.438718592993689 3.83853912360177e-05 1 hPsi_site_7944 iPseU_CNN:3.83853912360177e-05;iRNA_PseU:1 7945 chr7 100466372 100466372 1 + G A SKCM 100466392 + 100466372 100466412 41 GAAGTCTGGGGGCCTGGCTATAGGAGCCAGAGAGAGCCAGG AAAGTCTGGGGGCCTGGCTATAGGAGCCAGAGAGAGCCAGG < 41bp 1 0.0825921678406366 1 0.992534041404724 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466392 chr7:100466372 nonsynonymous SNV 0.997 0 1 hPsi_associated_SNPs_1379 0 0 1 0 1 Ribosome 1 0.438715762142229 0.014931917190552 1 hPsi_site_7945 iPseU_CNN:0.014931917190552;iRNA_PseU:1 7946 chr2 84518394 84518394 1 + C T SKCM 84518375 + 84518355 84518395 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATTC < 41bp 1 0.255606505567875 1 0.933925569057465 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2P2 ENSG00000182814 ncRNA_exonic Human transcribed_processed_pseudogene chr2:84518375 chr2:84518394 . . 0 40 hPsi_associated_SNPs_1380 0 0 0 0 0 unknown 1 0.462002916415944 0.13214886188507 1 hPsi_site_7946 iPseU_CNN:0.13214886188507;iRNA_PseU:1 7947 chr5 141318137 141318137 1 + C T SKCM 141318126 + 141318106 141318146 41 ACAGTTACAGGACTGAAGTCTTTCTCCAGCCCCTCCCTCTG ACAGTTACAGGACTGAAGTCTTTCTCCAGCCTCTCCCTCTG < 41bp 1 0.369494791107659 1 0.996030807495117 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141318126 chr5:141318137 nonsynonymous SNV 1.000 4 32 hPsi_associated_SNPs_1381 0 0 1 0 1 Ribosome 1 0.439187442376062 0.00793838500976607 1 hPsi_site_7947 iPseU_CNN:0.00793838500976607;iRNA_PseU:1 7948 chr10 85901294 85901294 1 + C G SKCM 85901298 + 85901278 85901318 41 TGTCTCCGGACACTACCTTCTAGGGTTTTCCACCCAGCTTT TGTCTCCGGACACTACGTTCTAGGGTTTTCCACCCAGCTTT < 41bp 1 0.261529316478099 1 0.998877882957458 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GHITM ENSG00000165678 CDS Human protein_coding chr10:85901298 chr10:85901294 nonsynonymous SNV 1.000 2 17 hPsi_associated_SNPs_1382 0 0 1 0 1 Ribosome 1 0.43880455467608 0.0022442340850839 1 hPsi_site_7948 iPseU_CNN:0.0022442340850839;iRNA_PseU:1 7949 chr8 144358683 144358683 1 + C T SKCM 144358681 + 144358661 144358701 41 GCCAGGCCTTCAGCCAGAGCTCCAACCTGGTGCGCCACCAG GCCAGGCCTTCAGCCAGAGCTCTAACCTGGTGCGCCACCAG < 41bp 1 0.274968856605833 1 0.999994874000549 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLI4 ENSG00000250571 CDS Human protein_coding chr8:144358681 chr8:144358683 synonymous SNV . 0 23 hPsi_associated_SNPs_1383 0 0 0 0 0 chromatin 1 0.438718570607608 1.02519989020333e-05 1 hPsi_site_7949 iPseU_CNN:1.02519989020333e-05;iRNA_PseU:1 7950 chr8 95782759 95782759 1 + C A SKCM 95782769 + 95782749 95782789 41 TCATGTAATTCACACTATTTTATTGGGTTCTCTTGCAATGG TCATGTAATTAACACTATTTTATTGGGTTCTCTTGCAATGG < 41bp 1 0.214139096933579 1 0.984750986099243 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DPY19L4 ENSG00000156162 CDS Human protein_coding chr8:95782769 chr8:95782759 nonsynonymous SNV 0.999 2 11 hPsi_associated_SNPs_1384 0 0 1 0 1 Endoplasmic reticulum 1 0.469643901179834 0.0304980278015139 1 hPsi_site_7950 iPseU_CNN:0.0304980278015139;iRNA_PseU:1 7951 chr16 31926038 31926038 1 + T C SKCM 31926028 + 31926008 31926048 41 TTTGTTTCACCAGCAAATACTTTCTTCTTGTGCCAAAAGCT TTTGTTTCACCAGCAAATACTTTCTTCTTGCGCCAAAAGCT < 41bp 1 0.175922591251316 1 0.999976873397827 experiment 1 Functional Loss NA| ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31926028 chr16:31926038 synonymous SNV . 0 31 hPsi_associated_SNPs_1385 0 0 0 0 0 chromatin 1 0.817741105844873 4.62532043459252e-05 0.364517788310255 hPsi_site_7951 iPseU_CNN:4.62532043459252e-05;iRNA_PseU:0.364517788310255 7952 chr17 80887337 80887337 1 + G T SKCM 80887323 + 80887303 80887343 41 TTGGGCTGCCCACCTACCGCTACCACGTCCTGCTGGGGCTA TTGGGCTGCCCACCTACCGCTACCACGTCCTGCTTGGGCTA < 41bp 1 0.450410341052916 1 0.716484606266022 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TBCD ENSG00000141556 CDS Human protein_coding chr17:80887323 chr17:80887337 synonymous SNV . 0 35 hPsi_associated_SNPs_1388 0 0 1 0 2 Nucleus 1 0.465866767354609 0.567030787467956 1 hPsi_site_7952 iPseU_CNN:0.567030787467956;iRNA_PseU:1 7953 chr17 27011718 27011718 1 + C T SKCM 27011710 + 27011690 27011730 41 CGAGAACCAAGGGAAGGGCATTCGAGTCCTCGGCATTGCTT CGAGAACCAAGGGAAGGGCATTCGAGTCTTCGGCATTGCTT < 41bp 1 0.675080077901237 1 0.998079419136047 experiment 0.649839844197527 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011710 chr17:27011718 nonsynonymous SNV 0.978 1 29 hPsi_associated_SNPs_1389 0 0 1 0 1 Cytosol 1 0.438718520747939 0.00384116172790594 1 hPsi_site_7953 iPseU_CNN:0.00384116172790594;iRNA_PseU:1 7954 chr7 111935966 111935966 1 + C T SKCM 111935973 + 111935953 111935993 41 CTGAACAGCCCATCACAGATTTTTGTAGTGTAATAAGAATT CTGAACAGCCCATTACAGATTTTTGTAGTGTAATAAGAATT < 41bp 1 0.648747221458927 1 0.724886536598206 experiment 0.702505557082146 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111935973 chr7:111935966 synonymous SNV . 0 14 hPsi_associated_SNPs_1390 0 0 1 0 2 chromatin 1 0.438683851196851 0.550226926803588 1 hPsi_site_7954 iPseU_CNN:0.550226926803588;iRNA_PseU:1 7955 chr1 183072720 183072720 1 + G A SKCM 183072710 + 183072690 183072730 41 ACTGGGGGCAACGTGGCCTTTTCTACCCTGGAAGGAAGGCC ACTGGGGGCAACGTGGCCTTTTCTACCCTGAAAGGAAGGCC < 41bp 1 0.679248627734857 1 0.995749354362488 experiment 0.641502744530287 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183072710 chr1:183072720 nonsynonymous SNV 0.987 4 31 hPsi_associated_SNPs_1394 0 0 1 0 1 Ribosome 1 0.438722207176395 0.00850129127502397 1 hPsi_site_7955 iPseU_CNN:0.00850129127502397;iRNA_PseU:1 7956 chr12 6837122 6837122 1 + C T SKCM 6837107 + 6837087 6837127 41 CGCAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCCGGCTG CGCAGCTGGCTGAGAGTGACTTTGCCTCTACCTTCTGGCTG < 41bp 1 0.497288870662678 1 0.999350547790527 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control COPS7A ENSG00000111652 CDS Human protein_coding chr12:6837107 chr12:6837122 nonsynonymous SNV 0.998 4 36 hPsi_associated_SNPs_1395 0 0 1 2 2 Cytosol 1 0.700028015356829 0.00129890441894598 0.599943969286341 hPsi_site_7956 iPseU_CNN:0.00129890441894598;iRNA_PseU:0.599943969286341 7957 chr21 35514810 35514810 1 + C T SKCM 35514801 + 35514781 35514821 41 GATGTGATTAGAGGGAATATTGTCAAACACCCTCTGACCCA GATGTGATTAGAGGGAATATTGTCAAACATCCTCTGACCCA < 41bp 1 0.386667178503299 1 0.680738210678101 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MRPS6 ENSG00000243927 CDS Human protein_coding chr21:35514801 chr21:35514810 synonymous SNV . 0 30 hPsi_associated_SNPs_1396 0 0 1 0 0 Ribosome 1 0.439037185075779 0.638523578643798 1 hPsi_site_7957 iPseU_CNN:0.638523578643798;iRNA_PseU:1 7958 chr21 35514811 35514811 1 + C T SKCM 35514801 + 35514781 35514821 41 GATGTGATTAGAGGGAATATTGTCAAACACCCTCTGACCCA GATGTGATTAGAGGGAATATTGTCAAACACTCTCTGACCCA < 41bp 1 0.448939337766707 1 0.815976798534393 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MRPS6 ENSG00000243927 CDS Human protein_coding chr21:35514801 chr21:35514811 nonsynonymous SNV 0.994 1 31 hPsi_associated_SNPs_1397 0 0 1 0 0 Ribosome 1 0.43857860140832 0.368046402931214 1 hPsi_site_7958 iPseU_CNN:0.368046402931214;iRNA_PseU:1 7959 chr12 102108354 102108354 1 + T C SKCM 102108355 + 102108335 102108375 41 TGGTTTTTTTTCTGCTCTTTTATTGGGATGTTTGTGTTTTA TGGTTTTTTTTCTGCTCTTCTATTGGGATGTTTGTGTTTTA < 41bp 1 0.128192431545721 1 0.970866739749908 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102108355 chr12:102108354 nonsynonymous SNV 0.996 3 20 hPsi_associated_SNPs_1398 0 0 1 3 2 Ribosome 1 0.438718410335023 0.058266520500184 1 hPsi_site_7959 iPseU_CNN:0.058266520500184;iRNA_PseU:1 7960 chr19 3193344 3193344 1 + C T SKCM 3193339 + 3193319 3193359 41 AGACCGCCGTCCCCGTGTACTTTGCCGTGGAGGACGAGGCC AGACCGCCGTCCCCGTGTACTTTGCTGTGGAGGACGAGGCC < 41bp 1 0.270331576216872 1 0.999482750892639 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3193339 chr19:3193344 synonymous SNV . 0 26 hPsi_associated_SNPs_1399 0 0 1 0 2 Ribosome 1 0.438734201209672 0.0010344982147219 1 hPsi_site_7960 iPseU_CNN:0.0010344982147219;iRNA_PseU:1 7961 chr20 44047516 44047516 1 + C T SKCM 44047502 + 44047482 44047522 41 CTCTATCCAGTGTGGATAAATCTTGGAAGGAGCTCAGTAAT CTCTATCCAGTGTGGATAAATCTTGGAAGGAGCTTAGTAAT < 41bp 1 0.0225616067403741 1 0.996528029441833 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PIGT ENSG00000124155 CDS Human protein_coding chr20:44047502 chr20:44047516 nonsynonymous SNV . 0 35 hPsi_associated_SNPs_1400 0 0 1 0 1 Ribosome 1 0.438803573741153 0.0069439411163339 1 hPsi_site_7961 iPseU_CNN:0.0069439411163339;iRNA_PseU:1 7962 chr11 9450137 9450137 1 + C T SKCM 9450120 + 9450100 9450140 41 AAGATCAGATGGAATACATGTTGCAGAATCATGTATTCCCT AAGATCAGATGGAATACATGTTGCAGAATCATGTATTTCCT < 41bp 1 0.14536838220857 1 0.997520685195923 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide IPO7 ENSG00000205339 CDS Human protein_coding chr11:9450120 chr11:9450137 synonymous SNV . 0 38 hPsi_associated_SNPs_1401 0 0 1 0 1 Cytosol 1 0.666766292212533 0.00495862960815407 0.666467415574934 hPsi_site_7962 iPseU_CNN:0.00495862960815407;iRNA_PseU:0.666467415574934 7963 chr17 42266514 42266514 1 + C T SKCM 42266527 + 42266507 42266547 41 AGCTTGGCTCTCTACCTACGTAGCAGACAGCGGTAGCAACC AGCTTGGTTCTCTACCTACGTAGCAGACAGCGGTAGCAACC < 41bp 1 0.200945912431285 1 0.999508142471313 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266527 chr17:42266514 nonsynonymous SNV 1.000 2 8 hPsi_associated_SNPs_1402 0 0 1 0 0 Endoplasmic reticulum 1 0.691960251121609 0.000983715057373935 0.616079497756783 hPsi_site_7963 iPseU_CNN:0.000983715057373935;iRNA_PseU:0.616079497756783 7964 chr2 74077540 74077540 1 + C T SKCM 74077523 + 74077503 74077543 41 ATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAA ATGAGGAATGAATTTACCATTACCCATGTTCTCATCCTCAA < 41bp 1 0.536003018016339 1 0.995663106441498 experiment 0.927993963967322 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077523 chr2:74077540 nonsynonymous SNV 0.998 4 38 hPsi_associated_SNPs_1403 0 0 1 0 1 Ribosome 1 0.50618504467914 0.00867378711700395 0.987629910641721 hPsi_site_7964 iPseU_CNN:0.00867378711700395;iRNA_PseU:0.987629910641721 7965 chr3 93813945 93813945 1 + C T SKCM 93813948 + 93813928 93813968 41 GACTCTCAGAAGGCATCCTGTAGGATAAGTCAAAGGAGGAA GACTCTCAGAAGGCATCTTGTAGGATAAGTCAAAGGAGGAA < 41bp 1 0.212233463732619 1 0.931418657302856 experiment 1 Functional Loss NA| NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93813948 chr3:93813945 synonymous SNV . 0 18 hPsi_associated_SNPs_1404 0 0 1 0 2 chromatin 1 0.438718508602434 0.137162685394288 1 hPsi_site_7965 iPseU_CNN:0.137162685394288;iRNA_PseU:1 7966 chr11 117061419 117061419 1 + C A SKCM 117061417 + 117061397 117061437 41 TGGAGGGGCTGCTCAGTGCTTGCTATCATGTGTGCCCCAAC TGGAGGGGCTGCTCAGTGCTTGATATCATGTGTGCCCCAAC < 41bp 1 0.190328814387903 1 0.976386547088623 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117061417 chr11:117061419 stopgain 0.987 1 23 hPsi_associated_SNPs_1405 0 0 1 0 2 Ribosome 1 0.438720884321648 0.0472269058227539 1 hPsi_site_7966 iPseU_CNN:0.0472269058227539;iRNA_PseU:1 7967 chr19 50158053 50158053 1 + C T SKCM 50158038 + 50158018 50158058 41 TCCCTCTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACC TCCCTCTGGGGGGCTGCGGTTCGACCCCCCCCACCTCCACC < 41bp 1 0.52876534158272 1 0.9998499751091 experiment 0.942469316834559 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158038 chr19:50158053 nonsynonymous SNV 0.993 2 36 hPsi_associated_SNPs_1407 0 0 1 0 1 Cytosol 1 0.539663198837855 0.000300049781799983 0.92067360232429 hPsi_site_7967 iPseU_CNN:0.000300049781799983;iRNA_PseU:0.92067360232429 7968 chr17 7611328 7611328 1 + G A SKCM 7611309 + 7611289 7611329 41 GGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAGA GGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAAA < 41bp 1 0.155090065533698 1 0.937966108322144 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611309 chr17:7611328 nonsynonymous SNV 0.996 5 40 hPsi_associated_SNPs_1408 0 0 1 0 1 exosome 1 0.438718594840859 0.124067783355712 1 hPsi_site_7968 iPseU_CNN:0.124067783355712;iRNA_PseU:1 7969 chr4 25384968 25384968 1 + G A SKCM 25384959 + 25384939 25384979 41 CCTGAGAGCTTACACTCTTTTTCTGTGGAGGCTCCAGTTTC CCTGAGAGCTTACACTCTTTTTCTGTGGAAGCTCCAGTTTC < 41bp 1 0.186427582203651 1 0.973640203475952 experiment 1 Functional Loss NA| ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25384959 chr4:25384968 synonymous SNV . 0 30 hPsi_associated_SNPs_1410 0 0 1 0 1 chromatin 1 0.438739133360467 0.0527195930480959 1 hPsi_site_7969 iPseU_CNN:0.0527195930480959;iRNA_PseU:1 7970 chr7 105187477 105187477 1 + C T SKCM 105187492 + 105187472 105187512 41 GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAAAATTCT GGTTTTATGAGAGCCACAGTTAAATTCTGGCATAAAATTCT < 41bp 1 0.388026821828258 1 0.999998927116394 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RINT1 ENSG00000135249 CDS Human protein_coding chr7:105187492 chr7:105187477 synonymous SNV . 0 6 hPsi_associated_SNPs_1411 0 0 1 0 1 Nucleus 1 0.438294670011529 2.14576721191406e-06 1 hPsi_site_7970 iPseU_CNN:2.14576721191406e-06;iRNA_PseU:1 7971 chr16 28883917 28883917 1 + C T SKCM 28883910 + 28883890 28883930 41 CCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTCGATATGC CCGGGTCCAGCACCTGTGGTTCCAGTCTATTTTCGATATGC < 41bp 1 0.129409931794195 1 0.999701619148254 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883910 chr16:28883917 synonymous SNV . 0 28 hPsi_associated_SNPs_1412 0 0 1 0 1 Cytosol 1 0.440222618005116 0.000596761703492099 1 hPsi_site_7971 iPseU_CNN:0.000596761703492099;iRNA_PseU:1 7972 chr6 5431306 5431306 1 + C T SKCM 5431310 + 5431290 5431330 41 GGTAGACTGCTACTTCCCTTTTACACATCCTTCCTTTGAGA GGTAGACTGCTACTTCTCTTTTACACATCCTTCCTTTGAGA < 41bp 1 0.546988830013868 1 0.997385621070862 experiment 0.906022339972264 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FARS2 ENSG00000145982 CDS Human protein_coding chr6:5431310 chr6:5431306 nonsynonymous SNV 0.983 4 17 hPsi_associated_SNPs_1413 0 0 1 0 2 Ribosome 1 0.444099404104868 0.00522875785827592 1 hPsi_site_7972 iPseU_CNN:0.00522875785827592;iRNA_PseU:1 7973 chr15 41192378 41192378 1 + G A SKCM 41192374 + 41192354 41192394 41 TGCCCTGACCCAGAGCTACTTTGAGGAGATTGCCCTCAAGT TGCCCTGACCCAGAGCTACTTTGAAGAGATTGCCCTCAAGT < 41bp 1 0.615606180392977 1 0.642325758934021 experiment 0.768787639214046 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192374 chr15:41192378 synonymous SNV . 0 25 hPsi_associated_SNPs_1414 0 0 0 0 0 chromatin 1 0.495697935516781 0.715348482131958 1 hPsi_site_7973 iPseU_CNN:0.715348482131958;iRNA_PseU:1 7974 chr11 126143269 126143269 1 + C T SKCM 126143274 + 126143254 126143294 41 TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT TCCTCCCCTGGACCTTCGGTTCAACCCCTCGGGCTACCTCT < 41bp 1 0.667332091215289 1 0.999991953372955 experiment 0.665335817569423 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143274 chr11:126143269 synonymous SNV . 0 16 hPsi_associated_SNPs_1415 0 0 1 6 3 Ribosome 1 0.438718593019116 1.60932540900216e-05 1 hPsi_site_7974 iPseU_CNN:1.60932540900216e-05;iRNA_PseU:1 7975 chr11 126143291 126143291 1 + C T SKCM 126143274 + 126143254 126143294 41 TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACTTCT < 41bp 1 0.580308698234859 1 0.99372798204422 experiment 0.839382603530282 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143274 chr11:126143291 nonsynonymous SNV 0.603 5 38 hPsi_associated_SNPs_1416 0 0 1 9 3 Ribosome 1 0.918170367325113 0.0125440359115601 0.163659265349774 hPsi_site_7975 iPseU_CNN:0.0125440359115601;iRNA_PseU:0.163659265349774 7976 chr3 122525735 122525735 1 + C T SKCM 122525753 + 122525733 122525773 41 TTCCTTATGGTTTTGGGAACTGGTCTAAGATGCATACCTAT TTTCTTATGGTTTTGGGAACTGGTCTAAGATGCATACCTAT < 41bp 1 0.0311288723207032 1 0.924677610397339 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122525753 chr3:122525735 synonymous SNV . 0 3 hPsi_associated_SNPs_1417 0 0 0 0 2 Endoplasmic reticulum 1 0.439090268083796 0.150644779205322 1 hPsi_site_7976 iPseU_CNN:0.150644779205322;iRNA_PseU:1 7977 chr16 69969797 69969797 1 + C T SKCM 69969800 + 69969780 69969820 41 GACACGGGCTTCACCCTCCCTTTCTACAAGCGGATGCTCAA GACACGGGCTTCACCCTTCCTTTCTACAAGCGGATGCTCAA < 41bp 1 0.631506005848013 1 0.999203681945801 experiment 0.736987988303974 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WWP2 ENSG00000198373 CDS Human protein_coding chr16:69969800 chr16:69969797 synonymous SNV . 0 18 hPsi_associated_SNPs_1418 0 0 1 0 2 Ribosome 1 0.438718584057279 0.00159263610839799 1 hPsi_site_7977 iPseU_CNN:0.00159263610839799;iRNA_PseU:1 7978 chr22 29695762 29695762 1 + C T SKCM 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG TCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG < 41bp 1 0.464543319459231 1 0.999958276748657 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695762 nonsynonymous SNV 0.994 2 1 hPsi_associated_SNPs_1419 0 0 1 0 1 Cytosol 1 0.439222630554314 8.3446502685991e-05 1 hPsi_site_7978 iPseU_CNN:8.3446502685991e-05;iRNA_PseU:1 7979 chr1 25683301 25683301 1 + C T SKCM 25683293 + 25683273 25683313 41 TATTTTTACAGAAAAAGACATAGTATACCCTGGAATTGCTG TATTTTTACAGAAAAAGACATAGTATACTCTGGAATTGCTG < 41bp 1 0.477189225967576 1 2.89082527160645e-05 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25683293 chr1:25683301 nonsynonymous SNV 0.973 4 29 hPsi_associated_SNPs_1420 0 0 1 0 2 Ribosome 1 0.438750334979597 1 1 hPsi_site_7979 iPseU_CNN:1;iRNA_PseU:1 7980 chr1 36752674 36752674 1 + C T SKCM 36752689 + 36752669 36752709 41 ACATCCCAGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA ACATCTCAGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA < 41bp 1 0.160690266250402 1 0.96853369474411 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752689 chr1:36752674 synonymous SNV . 0 6 hPsi_associated_SNPs_1421 0 0 1 0 0 Nucleus 1 0.438718124197187 0.06293261051178 1 hPsi_site_7980 iPseU_CNN:0.06293261051178;iRNA_PseU:1 7981 chr1 1387781 1387781 1 + C T SKCM 1387773 + 1387753 1387793 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCCGTGCTTTTGTGACAGAC < 41bp 1 0.447770733829579 1 0.997807741165161 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387773 chr1:1387781 synonymous SNV . 0 29 hPsi_associated_SNPs_1422 0 0 0 0 2 Nucleus 1 0.438710665450877 0.00438451766967796 1 hPsi_site_7981 iPseU_CNN:0.00438451766967796;iRNA_PseU:1 7982 chr2 172585282 172585282 1 + C T SKCM 172585268 + 172585248 172585288 41 AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCC AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTTCTTCCC < 41bp 1 0.217765796262162 1 0.639258623123169 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172585268 chr2:172585282 nonsynonymous SNV 1.000 3 35 hPsi_associated_SNPs_1423 0 0 0 0 2 Cytosol 1 0.438719381981947 0.721482753753662 1 hPsi_site_7982 iPseU_CNN:0.721482753753662;iRNA_PseU:1 7983 chr11 126143258 126143258 1 + C T SKCM 126143274 + 126143254 126143294 41 TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT TCCTTCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT < 41bp 1 0.371691417759665 1 0.999711036682129 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143274 chr11:126143258 nonsynonymous SNV 0.058 1 5 hPsi_associated_SNPs_1424 0 0 1 0 3 Ribosome 1 0.499357212917984 0.000577926635741965 1 hPsi_site_7983 iPseU_CNN:0.000577926635741965;iRNA_PseU:1 7984 chr21 38538480 38538480 1 + C T SKCM 38538499 + 38538479 38538519 41 TCCTTTCCAGAGATTTGATATCACCCAGACACCGCCAGCAT TTCTTTCCAGAGATTTGATATCACCCAGACACCGCCAGCAT < 41bp 1 0.119407975052855 1 0.930586457252502 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38538499 chr21:38538480 nonsynonymous SNV 0.944 3 2 hPsi_associated_SNPs_1425 0 0 1 0 0 Cytosol 1 0.438718629732023 0.138827085494996 1 hPsi_site_7984 iPseU_CNN:0.138827085494996;iRNA_PseU:1 7985 chr11 126143259 126143259 1 + C T SKCM 126143274 + 126143254 126143294 41 TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT TCCTCTCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT < 41bp 1 0.391962677308762 1 0.998979568481445 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143274 chr11:126143259 nonsynonymous SNV 0.046 2 6 hPsi_associated_SNPs_1426 0 0 1 0 3 Ribosome 1 0.438718578157005 0.00204086303711004 1 hPsi_site_7985 iPseU_CNN:0.00204086303711004;iRNA_PseU:1 7986 chr17 37866711 37866711 1 + C T SKCM 37866698 + 37866678 37866718 41 TGCCCAATCCCGAGGGCCGGTATACATTCGGCGCCAGCTGT TGCCCAATCCCGAGGGCCGGTATACATTCGGCGTCAGCTGT < 41bp 1 0.657874544255726 1 0.999842524528503 experiment 0.684250911488547 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37866698 chr17:37866711 nonsynonymous SNV 0.733 3 34 hPsi_associated_SNPs_1428 0 0 1 0 1 Cytosol 1 0.444711935623249 0.000314950942994052 1 hPsi_site_7986 iPseU_CNN:0.000314950942994052;iRNA_PseU:1 7987 chr4 99273742 99273742 1 + T C SKCM 99273729 + 99273709 99273749 41 GCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATA GCTTCAAACGGGCAGGGCTCTAGGAAACATATGCTACGATA < 41bp 1 0.208475916225571 1 0.999614953994751 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAP1GDS1 ENSG00000138698 CDS Human protein_coding chr4:99273729 chr4:99273742 synonymous SNV . 0 34 hPsi_associated_SNPs_1429 0 0 1 0 1 Ribosome 1 0.562199832993102 0.000770092010498047 0.875600334013796 hPsi_site_7987 iPseU_CNN:0.000770092010498047;iRNA_PseU:0.875600334013796 7988 chr14 71435813 71435813 1 + G A SKCM 71435794 + 71435774 71435814 41 GTTTAAGTCTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGGA GTTTAAGTCTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGAA < 41bp 1 0.43419285440342 1 0.998211622238159 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71435794 chr14:71435813 nonsynonymous SNV 1.000 4 40 hPsi_associated_SNPs_1430 0 0 1 0 2 Endoplasmic reticulum 1 0.438903002907927 0.00357675552368208 1 hPsi_site_7988 iPseU_CNN:0.00357675552368208;iRNA_PseU:1 7989 chr1 981185 981185 1 + C T SKCM 981180 + 981160 981200 41 ATGACGGGGCTGTGCTCGTGTAAGCCCGGGGTGGCTGGACC ATGACGGGGCTGTGCTCGTGTAAGCTCGGGGTGGCTGGACC < 41bp 1 0.656595264700023 1 0.992833495140076 experiment 0.686809470599953 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide AGRN ENSG00000188157 CDS Human protein_coding chr1:981180 chr1:981185 nonsynonymous SNV 0.110 2 26 hPsi_associated_SNPs_1431 0 0 1 0 2 Endoplasmic reticulum 1 0.445426496192556 0.014333009719848 1 hPsi_site_7989 iPseU_CNN:0.014333009719848;iRNA_PseU:1 7990 chr8 42012230 42012230 1 + A T SKCM 42012221 + 42012201 42012241 41 CCACCATGATCCATAGTCTTTTCTTGATCAACTCCTCTGGA CCACCATGATCCATAGTCTTTTCTTGATCTACTCCTCTGGA < 41bp 1 0.465518075869945 1 0.810297131538391 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42012221 chr8:42012230 nonsynonymous SNV 1.000 4 30 hPsi_associated_SNPs_1432 0 0 1 1 0 Nucleus 1 0.999989111958927 0.379405736923218 2.17760821468183e-05 hPsi_site_7990 iPseU_CNN:0.379405736923218;iRNA_PseU:2.17760821468183e-05 Blood metabolite levels 7991 chr17 37866686 37866686 1 + C T SKCM 37866698 + 37866678 37866718 41 TGCCCAATCCCGAGGGCCGGTATACATTCGGCGCCAGCTGT TGCCCAATTCCGAGGGCCGGTATACATTCGGCGCCAGCTGT < 41bp 1 0.650507539822923 1 0.994670510292053 experiment 0.698984920354154 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37866698 chr17:37866686 nonsynonymous SNV 0.997 2 9 hPsi_associated_SNPs_1433 0 0 1 0 2 Cytosol 1 0.445905138394199 0.010658979415894 1 hPsi_site_7991 iPseU_CNN:0.010658979415894;iRNA_PseU:1 7992 chr1 116225035 116225035 1 + C T SKCM 116225031 + 116225011 116225051 41 TAGAAAATTACTACAAAGATTTCACCATCTATAACCCAAAC TAGAAAATTACTACAAAGATTTCATCATCTATAACCCAAAC < 41bp 1 0.587761033055754 1 0.00263404846191406 experiment 0.824477933888491 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock VANGL1 ENSG00000173218 CDS Human protein_coding chr1:116225031 chr1:116225035 nonsynonymous SNV 1.000 2 25 hPsi_associated_SNPs_1434 0 0 1 0 2 Ribosome 1 0.651325160922019 1 0.697349678155962 hPsi_site_7992 iPseU_CNN:1;iRNA_PseU:0.697349678155962 7993 chr7 64389038 64389038 1 + C T SKCM 64389030 + 64389010 64389050 41 GTGGAAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGGAAAAGCCTTTAGTGTATTCTCAACTCTTACTAAACAT < 41bp 1 0.623893767237038 1 0.998006045818329 experiment 0.752212465525924 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64389030 chr7:64389038 synonymous SNV . 0 29 hPsi_associated_SNPs_1436 0 0 0 0 0 Cytosol 1 0.43871852720163 0.00398790836334206 1 hPsi_site_7993 iPseU_CNN:0.00398790836334206;iRNA_PseU:1 7994 chr11 489424 489424 1 + C T SKCM 489437 + 489417 489457 41 TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG TCGCCTTTCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG < 41bp 1 0.55115647591469 1 0.999990463256836 experiment 0.897687048170619 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489437 chr11:489424 synonymous SNV . 0 8 hPsi_associated_SNPs_1437 0 0 1 0 2 Ribosome 1 0.438607611845179 1.9073486327903e-05 1 hPsi_site_7994 iPseU_CNN:1.9073486327903e-05;iRNA_PseU:1 7995 chr11 117061423 117061423 1 + C T SKCM 117061417 + 117061397 117061437 41 TGGAGGGGCTGCTCAGTGCTTGCTATCATGTGTGCCCCAAC TGGAGGGGCTGCTCAGTGCTTGCTATTATGTGTGCCCCAAC < 41bp 1 0.40573578059785 1 0.872261703014374 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117061417 chr11:117061423 nonsynonymous SNV 0.978 4 27 hPsi_associated_SNPs_1438 0 0 1 0 2 Ribosome 1 0.438718498367941 0.255476593971252 1 hPsi_site_7995 iPseU_CNN:0.255476593971252;iRNA_PseU:1 7996 chr3 160945082 160945082 1 + G A SKCM 160945072 + 160945052 160945092 41 GAACTTGGATACAGTGTGCTTTAGAATCCAGGGAACTTCTT GAACTTGGATACAGTGTGCTTTAGAATCCAAGGAACTTCTT < 41bp 1 0.58558235878864 1 0.53059720993042 experiment 0.828835282422721 Functional Loss NA| NMD3 ENSG00000169251 CDS Human protein_coding chr3:160945072 chr3:160945082 nonsynonymous SNV 0.998 0 31 hPsi_associated_SNPs_1439 0 0 1 0 2 Nucleus 1 0.519484438670998 0.93880558013916 0.961031122658003 hPsi_site_7996 iPseU_CNN:0.93880558013916;iRNA_PseU:0.961031122658003 7997 chr1 93720073 93720073 1 + C T SKCM 93720071 + 93720051 93720091 41 ACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAA ACAAAATGCTAAAGAACAGCTTTGAGAAAAAGAGTTTATAA < 41bp 1 0.329201622797145 1 0.807973563671112 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93720071 chr1:93720073 stopgain 1.000 0 23 hPsi_associated_SNPs_1440 0 0 0 0 0 chromatin 1 0.438996781796221 0.384052872657776 1 hPsi_site_7997 iPseU_CNN:0.384052872657776;iRNA_PseU:1 7998 chr12 124497227 124497227 1 + C T STAD 124497241 + 124497221 124497261 41 GGAAGGCGTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG GGAAGGTGTTCAGTCAGAGTTCGAGCCTCTGCATCCACCAG < 41bp 1 0.652826874653902 1 0.998121023178101 experiment 0.694346250692196 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497241 chr12:124497227 nonsynonymous SNV 0.975 0 7 hPsi_associated_SNPs_1441 0 0 1 0 0 Nucleus 1 0.444312775562353 0.00375795364379794 1 hPsi_site_7998 iPseU_CNN:0.00375795364379794;iRNA_PseU:1 7999 chr14 77929018 77929018 1 + A G STAD 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACGC < 41bp 1 0.253140963234986 1 0.97585666179657 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929018 nonsynonymous SNV 1.000 3 40 hPsi_associated_SNPs_1442 0 0 1 0 2 Ribosome 1 0.826019502489041 0.0482866764068599 0.347960995021918 hPsi_site_7999 iPseU_CNN:0.0482866764068599;iRNA_PseU:0.347960995021918 8000 chr20 3017888 3017888 1 + A G STAD 3017901 + 3017881 3017921 41 CTTCCAGACTGTCAAGAGCCTGCGGCTACAGAGGCCACACA CTTCCAGGCTGTCAAGAGCCTGCGGCTACAGAGGCCACACA < 41bp 1 0.20812700707687 1 0.761886954307556 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PTPRA ENSG00000132670 CDS Human protein_coding chr20:3017901 chr20:3017888 nonsynonymous SNV 0.986 3 8 hPsi_associated_SNPs_1443 0 0 1 0 2 Ribosome 1 0.441298687472912 0.476226091384888 1 hPsi_site_8000 iPseU_CNN:0.476226091384888;iRNA_PseU:1 8001 chr12 97337417 97337417 1 + T C STAD 97337437 + 97337417 97337457 41 TTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAG CTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAG < 41bp 1 0.437808406497536 1 0.999903798103333 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97337437 chr12:97337417 synonymous SNV . 0 1 hPsi_associated_SNPs_1444 0 0 0 0 1 Nucleus 1 0.465911668866309 0.000192403793334073 1 hPsi_site_8001 iPseU_CNN:0.000192403793334073;iRNA_PseU:1 8002 chr6 32945244 32945244 1 + G T STAD 32945258 + 32945238 32945278 41 ATTACCGGGATGCACAGGAGTTTGCTGCTGATGTACGGCTT ATTACCTGGATGCACAGGAGTTTGCTGCTGATGTACGGCTT < 41bp 1 0.626763545571441 1 0.997586250305176 experiment 0.746472908857119 Functional Loss NA| BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945258 chr6:32945244 nonsynonymous SNV 1.000 2 7 hPsi_associated_SNPs_1445 0 0 1 1 1 Cytosol 1 0.438718343038932 0.00482749938964799 1 hPsi_site_8002 iPseU_CNN:0.00482749938964799;iRNA_PseU:1 8003 chr10 104122262 104122262 1 + A G STAD 104122275 + 104122255 104122295 41 ACTCTATACAACACACCTACTATCTCTTGATGCCCTATTGA ACTCTATGCAACACACCTACTATCTCTTGATGCCCTATTGA < 41bp 1 0.484101376797705 1 0.999989628791809 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104122275 chr10:104122262 nonsynonymous SNV 1.000 2 8 hPsi_associated_SNPs_1446 0 0 1 0 1 Nucleus 1 0.580697215387071 2.0742416382058e-05 0.838605569225857 hPsi_site_8003 iPseU_CNN:2.0742416382058e-05;iRNA_PseU:0.838605569225857 8004 chr17 65916176 65916176 1 + G T STAD 65916167 + 65916147 65916187 41 AATCACAACAACAGAAATAATTAAGAGGAGAGATGTTGGTC AATCACAACAACAGAAATAATTAAGAGGATAGATGTTGGTC < 41bp 1 0.219394812096986 1 0.226762354373932 experiment 1 Functional Loss NA| BPTF ENSG00000171634 CDS Human protein_coding chr17:65916167 chr17:65916176 nonsynonymous SNV 0.998 3 30 hPsi_associated_SNPs_1447 0 0 1 0 2 Cytosol 1 0.438718870753093 1 1 hPsi_site_8004 iPseU_CNN:1;iRNA_PseU:1 8005 chr17 65850239 65850239 1 + G A STAD 65850226 + 65850206 65850246 41 ACTTTGGCACTGTTTTGAGATTATCTCCTTTTCGCTTTGAG ACTTTGGCACTGTTTTGAGATTATCTCCTTTTCACTTTGAG < 41bp 1 0.698485999567913 1 0.995637178421021 experiment 0.603028000864173 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BPTF ENSG00000171634 CDS Human protein_coding chr17:65850226 chr17:65850239 nonsynonymous SNV 0.998 3 34 hPsi_associated_SNPs_1448 0 0 1 0 0 Cytosol 1 0.627980287927215 0.0087256431579581 0.744039424145569 hPsi_site_8005 iPseU_CNN:0.0087256431579581;iRNA_PseU:0.744039424145569 8006 chr4 160275010 160275010 1 + C T STAD 160275023 + 160275003 160275043 41 AGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAGACTCAGA AGCTGGGTGTCTTCCACAGGTTACTGGGGAGAAGACTCAGA < 41bp 1 0.441750418321617 1 0.529179871082306 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160275023 chr4:160275010 nonsynonymous SNV 0.877 2 8 hPsi_associated_SNPs_1449 0 0 1 0 0 Cytosol 1 0.46081463434252 0.941640257835388 1 hPsi_site_8006 iPseU_CNN:0.941640257835388;iRNA_PseU:1 8007 chr13 32953551 32953551 1 + C T STAD 32953554 + 32953534 32953574 41 GTTGGAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGG GTTGGAAATTAGGAAGGTCATGGAATCTGCTGAACAAAAGG < 41bp 1 0.110463683127932 1 0.843668222427368 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32953554 chr13:32953551 nonsynonymous SNV 0.928 4 18 hPsi_associated_SNPs_1450 0 0 1 0 0 Nucleus 1 0.515402885266717 0.312663555145264 0.969194229466566 hPsi_site_8007 iPseU_CNN:0.312663555145264;iRNA_PseU:0.969194229466566 8008 chr3 185347619 185347619 1 + A C STAD 185347639 + 185347619 185347659 41 AGCAGTTGCTGTGAGAAAACTTTGCCTGGTCCCTCTAGCTG CGCAGTTGCTGTGAGAAAACTTTGCCTGGTCCCTCTAGCTG < 41bp 1 0.451901729457248 1 0.973939180374146 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SENP2 ENSG00000163904 CDS Human protein_coding chr3:185347639 chr3:185347619 nonsynonymous SNV 1.000 4 1 hPsi_associated_SNPs_1451 0 0 1 0 1 Ribosome 1 0.442023677687552 0.0521216392517081 1 hPsi_site_8008 iPseU_CNN:0.0521216392517081;iRNA_PseU:1 8009 chr17 18781095 18781095 1 + A G STAD 18781102 + 18781082 18781122 41 TCATTGGCGTGATACCCTACTTTCCTTACAGCAAGCAGTGC TCATTGGCGTGATGCCCTACTTTCCTTACAGCAAGCAGTGC < 41bp 1 0.554812080028531 1 0.999991834163666 experiment 0.890375839942937 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18781102 chr17:18781095 nonsynonymous SNV 0.951 1 14 hPsi_associated_SNPs_1452 0 0 1 0 2 Ribosome 1 0.444262465994156 1.63316726680129e-05 1 hPsi_site_8009 iPseU_CNN:1.63316726680129e-05;iRNA_PseU:1 8010 chr2 233431863 233431863 1 + C T STAD 233431858 + 233431838 233431878 41 AGCCCGAATCCGGGACACACTTCGGCGAGTGCTTAACCTAC AGCCCGAATCCGGGACACACTTCGGTGAGTGCTTAACCTAC < 41bp 1 0.514437606803159 1 0.00142130255699158 experiment 0.971124786393681 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233431858 chr2:233431863 stopgain 1.000 1 26 hPsi_associated_SNPs_1453 0 0 1 0 2 Ribosome 1 0.475585362689042 1 1 hPsi_site_8010 iPseU_CNN:1;iRNA_PseU:1 8011 chr1 116941382 116941382 1 + T G STAD 116941381 + 116941361 116941401 41 TGATTCTTCTGGATGACAACTTTGCCTCAATTGTGACTGGA TGATTCTTCTGGATGACAACTGTGCCTCAATTGTGACTGGA < 41bp 1 0.147969781861112 1 0.343969911336899 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116941381 chr1:116941382 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_1455 0 0 1 0 1 Nucleus 1 0.448600754753448 1 1 hPsi_site_8011 iPseU_CNN:1;iRNA_PseU:1 8012 chr3 23959968 23959968 1 + C T STAD 23959949 + 23959929 23959969 41 AGGTTACGTTATATATAGGATTCGTGTTCGCCGTGGTGGCC AGGTTACGTTATATATAGGATTCGTGTTCGCCGTGGTGGTC < 41bp 1 0.686484075054583 1 0.999017655849457 experiment 0.627031849890833 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL15 ENSG00000174748 CDS Human protein_coding chr3:23959949 chr3:23959968 synonymous SNV . 0 40 hPsi_associated_SNPs_1456 0 0 0 0 3 Cytosol 1 0.752493695405909 0.00196468830108598 0.495012609188182 hPsi_site_8012 iPseU_CNN:0.00196468830108598;iRNA_PseU:0.495012609188182 8013 chr5 74009440 74009440 1 + A G STAD 74009441 + 74009421 74009461 41 GAATTTGATACCCCTGGGCATACACTATCTTGGGGAAAAGG GAATTTGATACCCCTGGGCGTACACTATCTTGGGGAAAAGG < 41bp 1 0.1665476588139 1 0.870536625385284 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:74009441 chr5:74009440 nonsynonymous SNV 0.927 5 20 hPsi_associated_SNPs_1458 0 0 1 0 1 Cytosol 1 0.438722852852022 0.258926749229432 1 hPsi_site_8013 iPseU_CNN:0.258926749229432;iRNA_PseU:1 8014 chr7 92163998 92163998 1 + T C STAD 92163978 + 92163958 92163998 41 CATCATAAAACAATGGGGCATTATAACCACAATGACTCTTT CATCATAAAACAATGGGGCATTATAACCACAATGACTCTTC < 41bp 1 0.435224001684103 1 0.766080498695374 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RBM48 ENSG00000127993 CDS Human protein_coding chr7:92163978 chr7:92163998 nonsynonymous SNV 0.027 0 41 hPsi_associated_SNPs_1459 0 0 1 0 0 Nucleus 1 0.438666857447868 0.467839002609252 1 hPsi_site_8014 iPseU_CNN:0.467839002609252;iRNA_PseU:1 8015 chr19 39390817 39390817 1 + C G STAD 39390823 + 39390803 39390843 41 TGTCGTGGGCTCCCCTCGTCTTCGGCTACGTCACTGAGGAT TGTCGTGGGCTCCCGTCGTCTTCGGCTACGTCACTGAGGAT < 41bp 1 0.298393714926902 1 0.894936561584473 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39390823 chr19:39390817 nonsynonymous SNV 0.982 1 15 hPsi_associated_SNPs_1461 0 0 1 0 1 Ribosome 1 0.4398136934876 0.210126876831054 1 hPsi_site_8015 iPseU_CNN:0.210126876831054;iRNA_PseU:1 8016 chrX 118540544 118540544 1 + C A STAD 118540525 + 118540505 118540545 41 TCCACCATTGTAACATATCCTACAGACCTCATCAAAACCCG TCCACCATTGTAACATATCCTACAGACCTCATCAAAACCAG < 41bp 1 0.672598243645866 1 0.997549533843994 experiment 0.654803512708267 Functional Loss NA| SLC25A43 ENSG00000077713 CDS Human protein_coding chrX:118540525 chrX:118540544 synonymous SNV . 0 40 hPsi_associated_SNPs_1462 0 0 0 0 0 Cytosol 1 0.439828045258251 0.00490093231201194 1 hPsi_site_8016 iPseU_CNN:0.00490093231201194;iRNA_PseU:1 8017 chr2 220366625 220366625 1 + C T STAD 220366621 + 220366601 220366641 41 ACAGGGGGTGGTCTTTACCATTTTCGAGACCAGATCCTGGC ACAGGGGGTGGTCTTTACCATTTTTGAGACCAGATCCTGGC < 41bp 1 0.555082354574514 1 0.999064922332764 experiment 0.889835290850972 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366621 chr2:220366625 stopgain 0.995 1 25 hPsi_associated_SNPs_1463 1 0 1 0 1 Ribosome 1 0.43871858911968 0.00187015533447199 1 hPsi_site_8017 iPseU_CNN:0.00187015533447199;iRNA_PseU:1 8018 chr10 93602099 93602099 1 + A G STAD 93602098 + 93602078 93602118 41 GTTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG GTTGTCTTCTCCTGATAATGTGAATTGCCGCGATACCCAAG < 41bp 1 0.105520850822374 1 0.350124388933182 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93602098 chr10:93602099 synonymous SNV . 0 22 hPsi_associated_SNPs_1464 0 0 1 0 1 Ribosome 1 0.438726262145711 1 1 hPsi_site_8018 iPseU_CNN:1;iRNA_PseU:1 8019 chr16 88923569 88923569 1 + G A STAD 88923566 + 88923546 88923586 41 CGAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGATTGCCA CGAGCCTCCCAAGATGGCGGTGTACATCGCGGTGATTGCCA < 41bp 1 0.287262521821181 1 0.965796232223511 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88923566 chr16:88923569 nonsynonymous SNV 0.991 5 24 hPsi_associated_SNPs_1465 0 0 1 0 1 Ribosome 1 0.460329223759684 0.0684075355529781 1 hPsi_site_8019 iPseU_CNN:0.0684075355529781;iRNA_PseU:1 8020 chrX 100387224 100387224 1 + C T STAD 100387237 + 100387217 100387257 41 CCTTCCTCTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC CCTTCCTTTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC < 41bp 1 0.592188709611674 1 0.992248356342316 experiment 0.815622580776652 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CENPI ENSG00000102384 CDS Human protein_coding chrX:100387237 chrX:100387224 nonsynonymous SNV 1.000 0 8 hPsi_associated_SNPs_1466 0 0 0 0 2 Nucleus 1 0.438718592920977 0.015503287315368 1 hPsi_site_8020 iPseU_CNN:0.015503287315368;iRNA_PseU:1 8021 chr2 27276785 27276785 1 + T A STAD 27276786 + 27276766 27276806 41 GACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCGTTTCG GACAGAGACGCAGTTTGTGATATCCTTTGTTCATCGTTTCG < 41bp 1 0.643356816211548 1 0.999963045120239 experiment 0.713286367576905 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27276786 chr2:27276785 nonsynonymous SNV 1.000 2 20 hPsi_associated_SNPs_1467 0 0 1 1 1 Cytosol 1 0.935225147342155 7.39097595219285e-05 0.129549705315689 hPsi_site_8021 iPseU_CNN:7.39097595219285e-05;iRNA_PseU:0.129549705315689 8022 chr9 97843020 97843020 1 + G A STAD 97843004 + 97842984 97843024 41 TCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACGAAAG TCGGTGGTGTGAACTCATTGTTAAGCACAAGTTCACAAAAG < 41bp 1 0.0523529067921587 1 0.999740719795227 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97843004 chr9:97843020 synonymous SNV . 0 37 hPsi_associated_SNPs_1468 0 0 1 0 2 Cytosol 1 0.463438211811877 0.000518560409545898 1 hPsi_site_8022 iPseU_CNN:0.000518560409545898;iRNA_PseU:1 8023 chr13 48919318 48919318 1 + C G STAD 48919311 + 48919291 48919331 41 GAAGAAGTATGATGTATTGTTTGCACTCTTCAGCAAATTGG GAAGAAGTATGATGTATTGTTTGCACTGTTCAGCAAATTGG < 41bp 1 0.104941681056943 1 0.994856357574463 experiment 1 Functional Loss NA| RB1 ENSG00000139687 CDS Human protein_coding chr13:48919311 chr13:48919318 synonymous SNV . 0 28 hPsi_associated_SNPs_1469 0 0 0 0 1 Nucleus 1 0.448933259524795 0.010287284851074 1 hPsi_site_8023 iPseU_CNN:0.010287284851074;iRNA_PseU:1 8024 chr11 6630832 6630832 1 + C T STAD 6630812 + 6630792 6630832 41 CCACCTGCTCCTCATCCTACTCTCATCACACACTGGATGCC CCACCTGCTCCTCATCCTACTCTCATCACACACTGGATGCT < 41bp 1 0.150929224855777 1 0.98222029209137 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6630812 chr11:6630832 nonsynonymous SNV 1.000 4 41 hPsi_associated_SNPs_1471 0 0 0 0 2 Endoplasmic reticulum 1 0.438946561265978 0.0355594158172601 1 hPsi_site_8024 iPseU_CNN:0.0355594158172601;iRNA_PseU:1 8025 chr17 80887329 80887329 1 + G A STAD 80887323 + 80887303 80887343 41 TTGGGCTGCCCACCTACCGCTACCACGTCCTGCTGGGGCTA TTGGGCTGCCCACCTACCGCTACCACATCCTGCTGGGGCTA < 41bp 1 0.677771620685256 1 0.977523803710938 experiment 0.644456758629488 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TBCD ENSG00000141556 CDS Human protein_coding chr17:80887323 chr17:80887329 nonsynonymous SNV 0.741 0 27 hPsi_associated_SNPs_1472 0 0 1 0 2 Nucleus 1 0.442064004194907 0.0449523925781239 1 hPsi_site_8025 iPseU_CNN:0.0449523925781239;iRNA_PseU:1 8026 chr8 33346614 33346614 1 + A G STAD 33346620 + 33346600 33346640 41 GATTCACCAAGATCACCCAATACCTAATTCGAATTAGAAAA GATTCACCAAGATCGCCCAATACCTAATTCGAATTAGAAAA < 41bp 1 0.315538359582478 1 0.958446383476257 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAK16 ENSG00000198042 CDS Human protein_coding chr8:33346620 chr8:33346614 nonsynonymous SNV 0.998 2 15 hPsi_associated_SNPs_1473 0 0 1 0 1 Cytosol 1 0.457041584695553 0.083107233047486 1 hPsi_site_8026 iPseU_CNN:0.083107233047486;iRNA_PseU:1 8027 chr19 39915081 39915081 1 + A G STAD 39915084 + 39915064 39915104 41 GCCATGTCACCTCCCAGACCTTCAGATTCCAGGTACCTCAC GCCATGTCACCTCCCAGGCCTTCAGATTCCAGGTACCTCAC < 41bp 1 0.503789533188219 1 0.994889497756958 experiment 0.992420933623563 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915084 chr19:39915081 nonsynonymous SNV 0.026 1 18 hPsi_associated_SNPs_1474 0 0 1 0 0 Nucleus 1 0.438724587773025 0.010221004486084 1 hPsi_site_8027 iPseU_CNN:0.010221004486084;iRNA_PseU:1 8028 chr16 89629397 89629397 1 + C G STAD 89629388 + 89629368 89629408 41 CCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGA CCCGTGCCAACGCCCGGCTCTTCGGCATAGGGGCAAAAAGA < 41bp 1 0.248043562245007 1 0.999563097953796 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629388 chr16:89629397 nonsynonymous SNV 0.456 3 30 hPsi_associated_SNPs_1475 0 0 0 0 0 Cytosol 1 0.439342422525564 0.000873804092407893 1 hPsi_site_8028 iPseU_CNN:0.000873804092407893;iRNA_PseU:1 8029 chr2 109086522 109086522 1 + C A STAD 109086516 + 109086496 109086536 41 GCAGGAAGAGCTTTTACAGTTGAAAGCTATACACCAAGAAG GCAGGAAGAGCTTTTACAGTTGAAAGATATACACCAAGAAG < 41bp 1 0.385409285895321 1 0.921899735927582 experiment 1 Functional Loss NA| GCC2 ENSG00000135968 CDS Human protein_coding chr2:109086516 chr2:109086522 nonsynonymous SNV 0.101 0 27 hPsi_associated_SNPs_1476 0 0 1 0 0 chromatin 1 0.440134732201863 0.156200528144836 1 hPsi_site_8029 iPseU_CNN:0.156200528144836;iRNA_PseU:1 8030 chr2 179365829 179365829 1 + G A STAD 179365814 + 179365794 179365834 41 CCACTCTATAAAAGAACCAGTATCTACACTTCACCGACTCT CCACTCTATAAAAGAACCAGTATCTACACTTCACCAACTCT < 41bp 1 0.555384785584945 1 0.999907851219177 experiment 0.889230428830109 Functional Loss NA| PLEKHA3 ENSG00000116095 CDS Human protein_coding chr2:179365814 chr2:179365829 nonsynonymous SNV 0.998 1 36 hPsi_associated_SNPs_1477 0 0 1 0 2 Ribosome 1 0.438718592994838 0.000184297561645952 1 hPsi_site_8030 iPseU_CNN:0.000184297561645952;iRNA_PseU:1 not specified not specified 8031 chr1 27614178 27614178 1 + C G STAD 27614196 + 27614176 27614216 41 CGCTGGGGACCGCATCTTGATCACGGGGGCAGCCGACTCTA CGGTGGGGACCGCATCTTGATCACGGGGGCAGCCGACTCTA < 41bp 1 0.247724684490671 1 0.972686767578125 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27614196 chr1:27614178 nonsynonymous SNV 0.998 2 3 hPsi_associated_SNPs_1478 0 0 1 0 1 Cytosol 1 0.459282728021271 0.05462646484375 1 hPsi_site_8031 iPseU_CNN:0.05462646484375;iRNA_PseU:1 8032 chr5 76029103 76029103 1 + T A STAD 76029101 + 76029081 76029121 41 CCACCACAGAGGCTGCCTACTTTGCCTACCTCCTCTGTGTC CCACCACAGAGGCTGCCTACTTAGCCTACCTCCTCTGTGTC < 41bp 1 0.38324264954604 1 0.999788165092468 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control F2R ENSG00000181104 CDS Human protein_coding chr5:76029101 chr5:76029103 nonsynonymous SNV 0.999 3 23 hPsi_associated_SNPs_1480 0 0 1 0 0 Endoplasmic reticulum 1 0.999954239950156 0.000423669815063921 9.15200996876031e-05 hPsi_site_8032 iPseU_CNN:0.000423669815063921;iRNA_PseU:9.15200996876031e-05 8033 chr7 56136300 56136300 1 + G A STAD 56136304 + 56136284 56136324 41 GAAACCCTTTGCCATCGACATATTTCCTGTCACCAACAAAG GAAACCCTTTGCCATCAACATATTTCCTGTCACCAACAAAG < 41bp 1 0.653255432971118 1 0.978126645088196 experiment 0.693489134057763 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136304 chr7:56136300 nonsynonymous SNV 0.987 3 17 hPsi_associated_SNPs_1481 0 0 1 1 1 Ribosome 1 0.438720837849362 0.043746709823608 1 hPsi_site_8033 iPseU_CNN:0.043746709823608;iRNA_PseU:1 8034 chr20 62373773 62373773 1 + C T STAD 62373766 + 62373746 62373786 41 GGATGTTGGTGTGGACACGCTGACCGACGGGCTGTCCAGCC GGATGTTGGTGTGGACACGCTGACCGATGGGCTGTCCAGCC < 41bp 1 0.145478144373184 1 0.358908414840698 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373766 chr20:62373773 synonymous SNV . 0 28 hPsi_associated_SNPs_1482 0 0 1 0 1 Cytosol 1 0.461229166423445 1 1 hPsi_site_8034 iPseU_CNN:1;iRNA_PseU:1 8035 chr19 19453437 19453437 1 + G A STAD 19453446 + 19453426 19453466 41 CCAGCAACCCCGCTGACCTCTTCCACTGGCTGCCCAAGGAG CCAGCAACCCCACTGACCTCTTCCACTGGCTGCCCAAGGAG < 41bp 1 0.437458417206382 1 0.960320830345154 experiment 1 Functional Loss NA| MAU2 ENSG00000129933 CDS Human protein_coding chr19:19453446 chr19:19453437 nonsynonymous SNV 0.780 1 12 hPsi_associated_SNPs_1483 0 0 1 0 2 Nucleus 1 0.441586718423106 0.0793583393096919 1 hPsi_site_8035 iPseU_CNN:0.0793583393096919;iRNA_PseU:1 8036 chr11 70049581 70049581 1 + G T STAD 70049575 + 70049555 70049595 41 CAGACCCCGCCATGGACCCGTTCCTGGTGCTGCTGCACTCG CAGACCCCGCCATGGACCCGTTCCTGTTGCTGCTGCACTCG < 41bp 1 0.251944201544056 1 0.999753475189209 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FADD ENSG00000168040 CDS Human protein_coding chr11:70049575 chr11:70049581 nonsynonymous SNV 1.000 1 27 hPsi_associated_SNPs_1484 0 0 1 0 0 Ribosome 1 0.438718404912528 0.000493049621582031 1 hPsi_site_8036 iPseU_CNN:0.000493049621582031;iRNA_PseU:1 8037 chr17 18226023 18226023 1 + G A STAD 18226034 + 18226014 18226054 41 AAACCCTGCGCTGCCCCCTTTACAGAGGCACCCTGGTGCCC AAACCCTGCACTGCCCCCTTTACAGAGGCACCCTGGTGCCC < 41bp 1 0.559863205310868 1 0.97015106678009 experiment 0.880273589378265 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18226034 chr17:18226023 nonsynonymous SNV 1.000 0 10 hPsi_associated_SNPs_1485 0 0 1 0 0 chromatin 1 0.458899023591648 0.05969786643982 1 hPsi_site_8037 iPseU_CNN:0.05969786643982;iRNA_PseU:1 8038 chrX 119007297 119007297 1 + T C STAD 119007286 + 119007266 119007306 41 GGAAAAAAGGGTTGCTCATTTTGGGTATCACTGGAGTCTGA GGAAAAAAGGGTTGCTCATTTTGGGTATCACCGGAGTCTGA < 41bp 1 0.219137959367494 1 0.809526920318604 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007286 chrX:119007297 nonsynonymous SNV 0.008 4 32 hPsi_associated_SNPs_1486 0 0 1 0 2 Ribosome 1 0.44286710978063 0.380946159362792 1 hPsi_site_8038 iPseU_CNN:0.380946159362792;iRNA_PseU:1 8039 chr13 48919305 48919305 1 + T C STAD 48919311 + 48919291 48919331 41 GAAGAAGTATGATGTATTGTTTGCACTCTTCAGCAAATTGG GAAGAAGTATGATGCATTGTTTGCACTCTTCAGCAAATTGG < 41bp 1 0.192912365664726 1 0.999930500984192 experiment 1 Functional Loss NA| RB1 ENSG00000139687 CDS Human protein_coding chr13:48919311 chr13:48919305 nonsynonymous SNV 0.996 3 15 hPsi_associated_SNPs_1487 0 0 1 0 1 Nucleus 1 0.444076149012929 0.000138998031615989 1 hPsi_site_8039 iPseU_CNN:0.000138998031615989;iRNA_PseU:1 8040 chr16 68373316 68373316 1 + T C STAD 68373310 + 68373290 68373330 41 GTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA GTGGTCGTGGAACAAGCTATTTCCCACCCACGTGCAGACCA < 41bp 1 0.357651826150751 1 0.902893900871277 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373310 chr16:68373316 nonsynonymous SNV 0.182 0 27 hPsi_associated_SNPs_1488 0 0 1 0 1 Nucleus 1 0.667831606569009 0.194212198257446 0.664336786861983 hPsi_site_8040 iPseU_CNN:0.194212198257446;iRNA_PseU:0.664336786861983 8041 chr10 45499107 45499107 1 + T C STAD 45499102 + 45499082 45499122 41 GGAAAAGTTTCTTTCAGAGTTCTAATCTCATTCAGCATCGA GGAAAAGTTTCTTTCAGAGTTCTAACCTCATTCAGCATCGA < 41bp 1 0.42711127677733 1 0.997416615486145 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF22 ENSG00000165512 CDS Human protein_coding chr10:45499102 chr10:45499107 synonymous SNV . 0 26 hPsi_associated_SNPs_1489 0 0 1 0 0 exosome 1 0.492933536525889 0.00516676902770996 1 hPsi_site_8041 iPseU_CNN:0.00516676902770996;iRNA_PseU:1 8042 chr7 64864403 64864403 1 + G A STAD 64864420 + 64864400 64864440 41 GTGGCAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGACAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT < 41bp 1 0.238619402457739 1 0.999352216720581 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64864420 chr7:64864403 nonsynonymous SNV 0.994 0 4 hPsi_associated_SNPs_1490 0 0 1 0 0 Cytosol 1 0.468185634428899 0.00129556655883789 1 hPsi_site_8042 iPseU_CNN:0.00129556655883789;iRNA_PseU:1 8043 chr9 107513407 107513407 1 + T C STAD 107513390 + 107513370 107513410 41 CTCACTCTGAATTGGTTGGATACTGGAGTGTAGAATTTGGA CTCACTCTGAATTGGTTGGATACTGGAGTGTAGAATTCGGA < 41bp 1 0.195162847817204 1 0.966626167297363 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107513390 chr9:107513407 synonymous SNV . 0 38 hPsi_associated_SNPs_1491 0 0 1 0 1 Ribosome 1 0.733032404299342 0.0667476654052741 0.533935191401317 hPsi_site_8043 iPseU_CNN:0.0667476654052741;iRNA_PseU:0.533935191401317 8044 chr1 116941372 116941372 1 + G A STAD 116941381 + 116941361 116941401 41 TGATTCTTCTGGATGACAACTTTGCCTCAATTGTGACTGGA TGATTCTTCTGAATGACAACTTTGCCTCAATTGTGACTGGA < 41bp 1 0.10757625452412 1 0.964068174362183 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116941381 chr1:116941372 nonsynonymous SNV 0.996 5 12 hPsi_associated_SNPs_1492 0 0 1 0 1 Nucleus 1 0.52032828095296 0.0718636512756341 0.95934343809408 hPsi_site_8044 iPseU_CNN:0.0718636512756341;iRNA_PseU:0.95934343809408 8045 chr20 44045194 44045194 1 + G A STAD 44045209 + 44045189 44045229 41 GGGCAGCTGATCTCCAAGTATTCTCTACGGGAGCTGCACCT GGGCAACTGATCTCCAAGTATTCTCTACGGGAGCTGCACCT < 41bp 1 0.0468773231149493 1 0.997975587844849 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045209 chr20:44045194 synonymous SNV . 0 6 hPsi_associated_SNPs_1493 0 0 1 1 0 Ribosome 1 0.485990197983197 0.00404882431030207 1 hPsi_site_8045 iPseU_CNN:0.00404882431030207;iRNA_PseU:1 8046 chr14 39597518 39597518 1 + A C STAD 39597508 + 39597488 39597528 41 CAGTAACTAGTGTCTTGGAATATCTGAGTAATTGGTTTGGA CAGTAACTAGTGTCTTGGAATATCTGAGTACTTGGTTTGGA < 41bp 1 0.16489632329548 1 0.99992448091507 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39597508 chr14:39597518 nonsynonymous SNV 1.000 1 31 hPsi_associated_SNPs_1494 0 0 1 1 2 Ribosome 1 0.438718850453899 0.000151038169859952 1 hPsi_site_8046 iPseU_CNN:0.000151038169859952;iRNA_PseU:1 8047 chr13 28197194 28197194 1 + A G STAD 28197193 + 28197173 28197213 41 CGGAAGTGGAATTTTGTGGTTACACTACGACCCATCCTTCA CGGAAGTGGAATTTTGTGGTTGCACTACGACCCATCCTTCA < 41bp 1 0.222124842541384 1 0.990378439426422 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197193 chr13:28197194 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_1495 0 0 1 0 0 Ribosome 1 0.464452086916697 0.019243121147156 1 hPsi_site_8047 iPseU_CNN:0.019243121147156;iRNA_PseU:1 8048 chr2 54014465 54014465 1 + G A STAD 54014448 + 54014428 54014468 41 GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACA GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATAACA < 41bp 1 0.121658779336677 1 0.952884137630463 experiment 1 Functional Loss NA| ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014448 chr2:54014465 nonsynonymous SNV 0.997 1 38 hPsi_associated_SNPs_1496 0 0 1 0 1 Endoplasmic reticulum 1 0.438719123533329 0.094231724739074 1 hPsi_site_8048 iPseU_CNN:0.094231724739074;iRNA_PseU:1 8049 chr3 9803194 9803194 1 + A G STAD 9803177 - 9803157 9803197 41 CCCTACAGCAAGGCTGTGGATTGCTGGTCCATAGGTGTCAT CCCCACAGCAAGGCTGTGGATTGCTGGTCCATAGGTGTCAT < 41bp 1 0.0823486366756752 1 0.997476994991302 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803177 chr3:9803194 nonsynonymous SNV 1.000 3 4 hPsi_associated_SNPs_1497 0 0 1 0 2 Ribosome 1 0.438445251499772 0.00504601001739591 1 hPsi_site_8049 iPseU_CNN:0.00504601001739591;iRNA_PseU:1 8050 chr8 38095637 38095637 1 + T G STAD 38095652 + 38095632 38095672 41 CAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGT CAGGGGCTGATGATTGGGGTTCAACACCCACGGAGCAGGGT < 41bp 1 0.128958225811791 1 0.996076703071594 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095652 chr8:38095637 nonsynonymous SNV 0.999 0 6 hPsi_associated_SNPs_1498 0 0 1 0 2 chromatin 1 0.468476029787829 0.00784659385681197 1 hPsi_site_8050 iPseU_CNN:0.00784659385681197;iRNA_PseU:1 8051 chr13 46056546 46056546 1 + A G STAD 46056557 + 46056537 46056577 41 TCGGTGAATAGTGACGGATTTATACCTATGCTGGCCAAGTT TCGGTGAATGGTGACGGATTTATACCTATGCTGGCCAAGTT < 41bp 1 0.258687348286279 1 0.999774217605591 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COG3 ENSG00000136152 CDS Human protein_coding chr13:46056557 chr13:46056546 nonsynonymous SNV 1.000 1 10 hPsi_associated_SNPs_1499 0 0 0 1 2 Nucleus 1 0.460452871068975 0.000451564788817915 1 hPsi_site_8051 iPseU_CNN:0.000451564788817915;iRNA_PseU:1 8052 chr11 65270819 65270819 1 + T A STAD 65270822 + 65270802 65270842 41 ATCGAGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCT ATCGAGCCTTTTTAAAAATGTAGGACTTGTTCCTGTGGGCT < 41bp 1 0.180985127668936 1 0.99987518787384 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|25192136;GSE58200;Pseudo-seq;Hela;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270822 chr11:65270819 . . 0 18 hPsi_associated_SNPs_1500 0 0 1 1 0 unknown 1 0.438718569962261 0.000249624252320002 1 hPsi_site_8052 iPseU_CNN:0.000249624252320002;iRNA_PseU:1 8053 chr7 8095099 8095099 1 + A G STAD 8095098 + 8095078 8095118 41 AGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAG AGGCAGCAACTACAACGCAGTGAACAGAGTAGTCGTCACAG < 41bp 1 0.0259294543970709 1 0.594262599945068 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLCCI1 ENSG00000106415 CDS Human protein_coding chr7:8095098 chr7:8095099 nonsynonymous SNV 0.920 4 22 hPsi_associated_SNPs_1501 0 0 1 0 2 Ribosome 1 0.43934925765451 0.811474800109864 1 hPsi_site_8053 iPseU_CNN:0.811474800109864;iRNA_PseU:1 8054 chr3 136046531 136046531 1 + A G STAD 136046533 + 136046513 136046553 41 ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAG ACCTTTGTGGTGATACCAGCTATGCCTGGCCCACCGCAGAG < 41bp 1 0.157426616031155 1 0.999865114688873 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136046533 chr3:136046531 nonsynonymous SNV 0.999 5 19 hPsi_associated_SNPs_1502 0 0 1 0 2 Ribosome 1 0.50507131959702 0.000269770622254084 0.98985736080596 hPsi_site_8054 iPseU_CNN:0.000269770622254084;iRNA_PseU:0.98985736080596 8055 chrX 48681771 48681771 1 + G A STAD 48681763 + 48681743 48681783 41 GACTACCTCAGAGGAGGCTGTAGGAGGAGCTACACTGGCCC GACTACCTCAGAGGAGGCTGTAGGAGGAACTACACTGGCCC < 41bp 1 0.170020519249124 1 0.999908089637756 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681763 chrX:48681771 nonsynonymous SNV 0.009 0 29 hPsi_associated_SNPs_1503 0 0 1 0 0 Cytosol 1 0.474180206153705 0.000183820724487971 1 hPsi_site_8055 iPseU_CNN:0.000183820724487971;iRNA_PseU:1 8056 chr14 21464425 21464425 1 + G A STAD 21464416 + 21464396 21464436 41 TGACCAACCTGGCCTGTAGCTTCTCACAGGCGTACCATCCC TGACCAACCTGGCCTGTAGCTTCTCACAGACGTACCATCCC < 41bp 1 0.166461760747634 1 0.999918162822723 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464416 chr14:21464425 nonsynonymous SNV 0.859 0 30 hPsi_associated_SNPs_1504 0 0 1 0 1 Ribosome 1 0.506828177465992 0.000163674354554111 0.986343645068016 hPsi_site_8056 iPseU_CNN:0.000163674354554111;iRNA_PseU:0.986343645068016 8057 chr19 39976416 39976416 1 + T C STAD 39976431 + 39976411 39976451 41 GGAGCTCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGT GGAGCCCACCGGCGTCCTCTTGCATCCTGAGTGGTCGGTGT < 41bp 1 0.305073950514611 1 0.956666827201843 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39976431 chr19:39976416 nonsynonymous SNV 0.827 4 6 hPsi_associated_SNPs_1505 0 0 1 0 2 Ribosome 1 0.438718678095493 0.0866663455963139 1 hPsi_site_8057 iPseU_CNN:0.0866663455963139;iRNA_PseU:1 8058 chr1 28176658 28176658 1 + C T STAD 28176670 + 28176650 28176690 41 GGAGCAGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTC GGAGCAGGTGCATGCAGAACTTTGCCTTCAGCGGAGGACTC < 41bp 1 0.295964537946956 1 0.996202349662781 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176670 chr1:28176658 nonsynonymous SNV 1.000 2 9 hPsi_associated_SNPs_1506 0 0 1 1 1 Ribosome 1 0.440277822458452 0.00759530067443803 1 hPsi_site_8058 iPseU_CNN:0.00759530067443803;iRNA_PseU:1 8059 chr2 74649365 74649365 1 + C G STAD 74649377 + 74649357 74649397 41 TGCCGGCTCGCAACCTCACGTATTTTGGCGTGGTTCATGGA TGCCGGCTGGCAACCTCACGTATTTTGGCGTGGTTCATGGA < 41bp 1 0.489442064879096 1 0.413828939199448 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDR54 ENSG00000005448 CDS Human protein_coding chr2:74649377 chr2:74649365 nonsynonymous SNV 0.058 0 9 hPsi_associated_SNPs_1507 0 0 1 0 1 nucleus 1 0.444806518094331 1 1 hPsi_site_8059 iPseU_CNN:1;iRNA_PseU:1 8060 chr17 41345516 41345516 1 + C T STAD 41345535 + 41345515 41345555 41 TCTCACAAAGGCCAGCAATTTGGGCCTCGGGTCTGGTGCAG TTTCACAAAGGCCAGCAATTTGGGCCTCGGGTCTGGTGCAG < 41bp 1 0.0915318126260763 1 0.978300809860229 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345535 chr17:41345516 nonsynonymous SNV 1.000 3 2 hPsi_associated_SNPs_1508 0 0 1 0 0 Cytosol 1 0.438717715508456 0.0433983802795419 1 hPsi_site_8060 iPseU_CNN:0.0433983802795419;iRNA_PseU:1 8061 chr5 79968069 79968069 1 + G A STAD 79968079 + 79968059 79968099 41 TTAGATTGCAGCCCGAGAGCTCAATATTTATTGCCATTTAG TTAGATTGCAACCCGAGAGCTCAATATTTATTGCCATTTAG < 41bp 1 0.0487129355744597 1 2.89082527160645e-05 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MSH3 ENSG00000113318 CDS Human protein_coding chr5:79968079 chr5:79968069 nonsynonymous SNV 1.000 5 11 hPsi_associated_SNPs_1509 0 0 0 0 1 chromatin 1 0.6919284341445 1 0.616143131711 hPsi_site_8061 iPseU_CNN:1;iRNA_PseU:0.616143131711 Cytochrome-c oxidase deficiency Cytochrome-c oxidase deficiency 8062 chr2 27276774 27276774 1 + C T STAD 27276786 + 27276766 27276806 41 GACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCGTTTCG GACAGAGATGCAGTTTGTGTTATCCTTTGTTCATCGTTTCG < 41bp 1 0.588991425577193 1 0.99998939037323 experiment 0.822017148845613 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27276786 chr2:27276774 nonsynonymous SNV 0.994 4 9 hPsi_associated_SNPs_1510 0 0 0 0 1 Cytosol 1 0.440932750371885 2.12192535400391e-05 1 hPsi_site_8062 iPseU_CNN:2.12192535400391e-05;iRNA_PseU:1 Leigh syndrome Leigh syndrome 8063 chr1 28176659 28176659 1 + G A STAD 28176670 + 28176650 28176690 41 GGAGCAGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTC GGAGCAGGCACATGCAGAACTTTGCCTTCAGCGGAGGACTC < 41bp 1 0.207299198509903 1 0.979073762893677 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176670 chr1:28176659 nonsynonymous SNV 1.000 1 10 hPsi_associated_SNPs_1511 0 0 1 1 1 Ribosome 1 0.440277405703312 0.041852474212646 1 hPsi_site_8063 iPseU_CNN:0.041852474212646;iRNA_PseU:1 8064 chr16 68330642 68330642 1 + G A STAD 68330649 + 68330629 68330669 41 ATTGCCCTTTCTGGAGTCCCTTTCTACTTCATGGGTGTTTA ATTGCCCTTTCTGAAGTCCCTTTCTACTTCATGGGTGTTTA < 41bp 1 0.294563175995673 1 0.998808741569519 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330649 chr16:68330642 nonsynonymous SNV 0.981 5 14 hPsi_associated_SNPs_1512 0 0 1 0 1 Ribosome 1 0.439232285151301 0.00238251686096191 1 hPsi_site_8064 iPseU_CNN:0.00238251686096191;iRNA_PseU:1 8065 chr6 71566593 71566593 1 + T G STAD 71566597 + 71566577 71566617 41 CCAGCAGCTGCAACCCTGTCTACAGTAACATCTGGGGATCT CCAGCAGCTGCAACCCGGTCTACAGTAACATCTGGGGATCT < 41bp 1 0.376307416549352 1 0.984497964382172 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71566597 chr6:71566593 nonsynonymous SNV 0.561 0 17 hPsi_associated_SNPs_1513 0 0 1 0 1 chromatin 1 0.438718592993153 0.0310040712356561 1 hPsi_site_8065 iPseU_CNN:0.0310040712356561;iRNA_PseU:1 8066 chr17 73820418 73820418 1 + G A STAD 73820434 + 73820414 73820454 41 ACACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT ACACACTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT < 41bp 1 0.226204062697647 1 0.999104738235474 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNK ENSG00000132478 CDS Human protein_coding chr17:73820434 chr17:73820418 nonsynonymous SNV 0.818 1 5 hPsi_associated_SNPs_1514 0 0 1 0 1 Cytosol 1 0.955509070519217 0.00179052352905207 0.0889818589615665 hPsi_site_8066 iPseU_CNN:0.00179052352905207;iRNA_PseU:0.0889818589615665 8067 chr10 102763814 102763814 1 + C T STAD 102763812 + 102763792 102763832 41 CCACCCCCGCCTCCACCTCCTTCGGATGAGGCCCTGCTGCA CCACCCCCGCCTCCACCTCCTTTGGATGAGGCCCTGCTGCA < 41bp 1 0.306386746858022 1 0.999947965145111 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763812 chr10:102763814 nonsynonymous SNV 0.978 0 23 hPsi_associated_SNPs_1515 0 0 1 0 0 Ribosome 1 0.438718593335503 0.000104069709778054 1 hPsi_site_8067 iPseU_CNN:0.000104069709778054;iRNA_PseU:1 8068 chr10 72299395 72299395 1 + C T STAD 72299409 + 72299389 72299429 41 GGGCCCCCTGACCTACAGGTTCCAGACCTGCCTTACCATGC GGGCCCTCTGACCTACAGGTTCCAGACCTGCCTTACCATGC < 41bp 1 0.420331552607796 1 0.99859619140625 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PALD1 ENSG00000107719 CDS Human protein_coding chr10:72299409 chr10:72299395 synonymous SNV . 0 7 hPsi_associated_SNPs_1516 0 0 1 0 0 Ribosome 1 0.461267316103144 0.0028076171875 1 hPsi_site_8068 iPseU_CNN:0.0028076171875;iRNA_PseU:1 8069 chr16 28883900 28883900 1 + C T STAD 28883910 + 28883890 28883930 41 CCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTCGATATGC CCGGGTCCAGTACCTGTGGTTCCAGTCCATTTTCGATATGC < 41bp 1 0.127348122862866 1 0.999697506427765 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883910 chr16:28883900 nonsynonymous SNV 1.000 4 11 hPsi_associated_SNPs_1517 0 0 1 0 1 Cytosol 1 0.439178768305563 0.000604987144469993 1 hPsi_site_8069 iPseU_CNN:0.000604987144469993;iRNA_PseU:1 8070 chrX 100646519 100646519 1 + T C STAD 100646506 + 100646486 100646526 41 TGTGGCAAGCACCAACCCCATAAAGTGACACAGTACAAGAA TGTGGCAAGCACCAACCCCATAAAGTGACACAGCACAAGAA < 41bp 1 0.528675953133106 1 0.0074828565120697 experiment 0.942648093733788 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646506 chrX:100646519 nonsynonymous SNV 1.000 1 34 hPsi_associated_SNPs_1518 0 0 1 0 1 unknown 1 0.52577079353871 1 0.948458412922581 hPsi_site_8070 iPseU_CNN:1;iRNA_PseU:0.948458412922581 8071 chr14 92597333 92597333 1 + C T STAD 92597340 + 92597320 92597360 41 CCAAAAAAAATGACGTCTATTATCAAATTAACTACCCTTTC CCAAAAAAAATGATGTCTATTATCAAATTAACTACCCTTTC < 41bp 1 0.683049979913565 1 0.994950890541077 experiment 0.633900040172871 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CPSF2 ENSG00000165934 CDS Human protein_coding chr14:92597340 chr14:92597333 nonsynonymous SNV 0.999 4 14 hPsi_associated_SNPs_1519 0 0 1 0 1 Ribosome 1 0.98709418777939 0.010098218917846 0.0258116244412203 hPsi_site_8071 iPseU_CNN:0.010098218917846;iRNA_PseU:0.0258116244412203 8072 chr12 2997246 2997246 1 + G A STAD 2997240 + 2997220 2997260 41 AGAGACATTGGGGATCCCCTTAATCCGAGAGTGCCCCAGTG AGAGACATTGGGGATCCCCTTAATCCAAGAGTGCCCCAGTG < 41bp 1 0.593775869754425 1 0.999987959861755 experiment 0.81244826049115 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RHNO1 ENSG00000171792 CDS Human protein_coding chr12:2997240 chr12:2997246 nonsynonymous SNV 0.000 0 27 hPsi_associated_SNPs_1520 0 0 1 0 0 Cytosol 1 0.43876703633935 2.40802764899239e-05 1 hPsi_site_8072 iPseU_CNN:2.40802764899239e-05;iRNA_PseU:1 8073 chr12 16042873 16042873 1 + A G STAD 16042893 + 16042873 16042913 41 ATGCTGTCTCAGGAGATGAATTGATGACCCTGGCTCATAAA GTGCTGTCTCAGGAGATGAATTGATGACCCTGGCTCATAAA < 41bp 1 0.170611985407663 1 0.99974000453949 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control STRAP ENSG00000023734 CDS Human protein_coding chr12:16042893 chr12:16042873 nonsynonymous SNV 1.000 3 1 hPsi_associated_SNPs_1521 0 0 1 0 2 Ribosome 1 0.998100241196611 0.000519990921020064 0.00379951760677733 hPsi_site_8073 iPseU_CNN:0.000519990921020064;iRNA_PseU:0.00379951760677733 8074 chr2 27446503 27446503 1 + C T STAD 27446486 + 27446466 27446506 41 TGGTGGGCTCTGGGCGCTGCTTTCTGACATCCCAGAACCAT TGGTGGGCTCTGGGCGCTGCTTTCTGACATCCCAGAATCAT < 41bp 1 0.265274697008751 1 0.974441051483154 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27446486 chr2:27446503 synonymous SNV . 0 38 hPsi_associated_SNPs_1522 0 0 0 0 1 Exosome 1 0.449221679102777 0.0511178970336921 1 hPsi_site_8074 iPseU_CNN:0.0511178970336921;iRNA_PseU:1 8075 chr19 50158031 50158031 1 + C G STAD 50158038 + 50158018 50158058 41 TCCCTCTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACC TCCCTCTGGGGGGGTGCGGTTCGACCCCCCCCACCCCCACC < 41bp 1 0.335516719282468 1 0.999826073646545 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158038 chr19:50158031 synonymous SNV . 0 14 hPsi_associated_SNPs_1523 0 0 1 0 1 Cytosol 1 0.439158692137632 0.000347852706910068 1 hPsi_site_8075 iPseU_CNN:0.000347852706910068;iRNA_PseU:1 8076 chr19 52719875 52719875 1 + G A STAD 52719893 + 52719873 52719913 41 TCGAGCACCTCTTGCCCCTCTTCCTGGCTCAGCTGAAGGAT TCAAGCACCTCTTGCCCCTCTTCCTGGCTCAGCTGAAGGAT < 41bp 1 0.105066668146882 1 0.970739543437958 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52719893 chr19:52719875 nonsynonymous SNV 0.986 2 3 hPsi_associated_SNPs_1524 0 0 1 0 1 Ribosome 1 0.438720148780202 0.058520913124084 1 hPsi_site_8076 iPseU_CNN:0.058520913124084;iRNA_PseU:1 8077 chr8 59488555 59488555 1 + C T STAD 59488553 + 59488533 59488573 41 AGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTGTGTA AGCAGAAATTAAGCAAGGGATTTGTGAAGTCATTTTGTGTA < 41bp 1 0.301561594437528 1 0.598677396774292 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SDCBP ENSG00000137575 CDS Human protein_coding chr8:59488553 chr8:59488555 nonsynonymous SNV 1.000 4 23 hPsi_associated_SNPs_1525 0 0 1 0 3 Ribosome 1 0.438717738546642 0.802645206451416 1 hPsi_site_8077 iPseU_CNN:0.802645206451416;iRNA_PseU:1 8078 chr2 136409535 136409535 1 + C T STAD 136409528 + 136409508 136409548 41 AGCCAGTCCCTACTGCTGGATATCCTGCCTCTGGTCATCCT AGCCAGTCCCTACTGCTGGATATCCTGTCTCTGGTCATCCT < 41bp 1 0.446629030677577 1 0.96904844045639 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136409528 chr2:136409535 nonsynonymous SNV 0.999 0 28 hPsi_associated_SNPs_1526 0 0 1 0 1 Cytosol 1 0.440400883276137 0.0619031190872199 1 hPsi_site_8078 iPseU_CNN:0.0619031190872199;iRNA_PseU:1 Interleukin-9 levels 8079 chr21 45499968 45499968 1 + G A STAD 45499973 + 45499953 45499993 41 CAAGCACTTCTGCCAGGAGATACTTGACTTTGCCAGCCAGC CAAGCACTTCTGCCAAGAGATACTTGACTTTGCCAGCCAGC < 41bp 1 0.405005356632292 1 0.999907851219177 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45499973 chr21:45499968 synonymous SNV . 0 16 hPsi_associated_SNPs_1527 0 0 1 0 2 Cytosol 1 0.480353533646152 0.000184297561645952 1 hPsi_site_8079 iPseU_CNN:0.000184297561645952;iRNA_PseU:1 Sjögren-Larsson syndrome Sjögren-Larsson syndrome 8080 chr20 18492909 18492909 1 + T C STAD 18492905 + 18492885 18492925 41 GCAAAACTTTGGGCCTGTAATTTCTGTTTTCAAAGAAATCA GCAAAACTTTGGGCCTGTAATTTCCGTTTTCAAAGAAATCA < 41bp 1 0.178218493557145 1 0.971640527248383 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SEC23B ENSG00000101310 CDS Human protein_coding chr20:18492905 chr20:18492909 nonsynonymous SNV 1.000 5 25 hPsi_associated_SNPs_1528 0 0 1 0 2 Cytosol 1 0.43871859299124 0.056718945503234 1 hPsi_site_8080 iPseU_CNN:0.056718945503234;iRNA_PseU:1 8081 chr5 137729043 137729043 1 + G A STAD 137729026 + 137729006 137729046 41 AAGGAACAGGAGCAAGATGATTCTACTGTAGCCTGCCGTTT AAGGAACAGGAGCAAGATGATTCTACTGTAGCCTGCCATTT < 41bp 1 0.232887176422819 1 0.938284337520599 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KDM3B ENSG00000120733 CDS Human protein_coding chr5:137729026 chr5:137729043 nonsynonymous SNV 1.000 4 38 hPsi_associated_SNPs_1529 0 0 1 0 1 Nucleus 1 0.985337197653613 0.123431324958802 0.0293256046927741 hPsi_site_8081 iPseU_CNN:0.123431324958802;iRNA_PseU:0.0293256046927741 8082 chr17 76395596 76395596 1 + G A STAD 76395580 + 76395560 76395600 41 ACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAA ACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCAACAA < 41bp 1 0.388719564336136 1 0.999975442886353 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PGS1 ENSG00000087157 CDS Human protein_coding chr17:76395580 chr17:76395596 nonsynonymous SNV 0.992 5 37 hPsi_associated_SNPs_1530 0 0 1 0 1 chromatin 1 0.432840289135374 4.91142272940337e-05 1 hPsi_site_8082 iPseU_CNN:4.91142272940337e-05;iRNA_PseU:1 8083 chr2 228221829 228221829 1 + G A STAD 228221822 + 228221802 228221842 41 TGCTTAATAGCTGGCTCTGGTTTCGCCGCTAGAGGTAACAT TGCTTAATAGCTGGCTCTGGTTTCGCCACTAGAGGTAACAT < 41bp 1 0.253790423814326 1 0.981175005435944 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFF ENSG00000168958 CDS Human protein_coding chr2:228221822 chr2:228221829 nonsynonymous SNV 1.000 4 28 hPsi_associated_SNPs_1531 0 0 1 0 0 Cytosol 1 0.721876860041401 0.0376499891281119 0.556246279917197 hPsi_site_8083 iPseU_CNN:0.0376499891281119;iRNA_PseU:0.556246279917197 8084 chr1 153963678 153963678 1 + T G STAD 153963671 + 153963651 153963691 41 CGCCTGGTGCAGAGCCCCAATTCCTACTTCATGGATGTGAA CGCCTGGTGCAGAGCCCCAATTCCTACGTCATGGATGTGAA < 41bp 1 0.234804611890335 1 0.996555268764496 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPS27 ENSG00000177954 CDS Human protein_coding chr1:153963671 chr1:153963678 nonsynonymous SNV 1.000 2 28 hPsi_associated_SNPs_1532 0 0 1 0 2 Cytosol 1 0.438585450582578 0.00688946247100808 1 hPsi_site_8084 iPseU_CNN:0.00688946247100808;iRNA_PseU:1 8085 chr12 70723256 70723256 1 + C T STAD 70723240 + 70723220 70723260 41 ATGAGGGGGATGAGCAACAATACCCCTCAGTTAAATCGCAG ATGAGGGGGATGAGCAACAATACCCCTCAGTTAAATTGCAG < 41bp 1 0.205656917523738 1 0.973771214485168 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70723240 chr12:70723256 nonsynonymous SNV 1.000 3 37 hPsi_associated_SNPs_1533 0 0 1 0 2 Nucleus 1 0.438718595123731 0.052457571029664 1 hPsi_site_8085 iPseU_CNN:0.052457571029664;iRNA_PseU:1 8086 chr10 7844768 7844768 1 + G A STAD 7844750 + 7844730 7844770 41 TTGACAAATTGACATTGACATTCAACCGTACCCGCCAAGCT TTGACAAATTGACATTGACATTCAACCGTACCCGCCAAACT < 41bp 1 0.218889639339657 1 0.999979734420776 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844750 chr10:7844768 nonsynonymous SNV 0.990 4 39 hPsi_associated_SNPs_1534 0 0 1 0 2 Ribosome 1 0.681064367956958 4.05311584479318e-05 0.637871264086083 hPsi_site_8086 iPseU_CNN:4.05311584479318e-05;iRNA_PseU:0.637871264086083 8087 chr3 136046553 136046553 1 + G T STAD 136046533 + 136046513 136046553 41 ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAG ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAT < 41bp 1 0.0792196588034482 1 0.999563813209534 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136046533 chr3:136046553 nonsynonymous SNV 0.999 5 41 hPsi_associated_SNPs_1535 0 0 1 0 2 Ribosome 1 0.438667667663749 0.000872373580931951 1 hPsi_site_8087 iPseU_CNN:0.000872373580931951;iRNA_PseU:1 8088 chr7 105187508 105187508 1 + A C STAD 105187492 + 105187472 105187512 41 GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAAAATTCT GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAAACTTCT < 41bp 1 0.257056139795421 1 1 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RINT1 ENSG00000135249 CDS Human protein_coding chr7:105187492 chr7:105187508 nonsynonymous SNV 1.000 1 37 hPsi_associated_SNPs_1536 0 0 1 0 1 Nucleus 1 0.439933543609507 0 1 hPsi_site_8088 iPseU_CNN:0;iRNA_PseU:1 8089 chr11 65268614 65268614 1 + C T STAD 65268606 + 65268586 65268626 41 AAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTC AAGTATTTCAGTTTTGTGAATAGATGACTTGTTTTTACTTC < 41bp 1 0.303167831061107 1 0.949495196342468 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268606 chr11:65268614 . . 0 29 hPsi_associated_SNPs_1537 0 0 1 0 0 unknown 1 0.438849457207995 0.101009607315064 1 hPsi_site_8089 iPseU_CNN:0.101009607315064;iRNA_PseU:1 8090 chr1 28176655 28176655 1 + A G STAD 28176670 + 28176650 28176690 41 GGAGCAGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTC GGAGCGGGCGCATGCAGAACTTTGCCTTCAGCGGAGGACTC < 41bp 1 0.516334666785423 1 0.996653974056244 experiment 0.967330666429155 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176670 chr1:28176655 nonsynonymous SNV 1.000 1 6 hPsi_associated_SNPs_1538 0 0 1 1 1 Ribosome 1 0.456037455912949 0.00669205188751198 1 hPsi_site_8090 iPseU_CNN:0.00669205188751198;iRNA_PseU:1 8091 chr16 30779324 30779324 1 + T C STAD 30779308 + 30779288 30779328 41 CCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGA CCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCCGAGA < 41bp 1 0.339659255890208 1 0.999984502792358 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779308 chr16:30779324 synonymous SNV . 0 37 hPsi_associated_SNPs_1539 0 0 1 0 1 Ribosome 1 0.438717735571819 3.09944152840913e-05 1 hPsi_site_8091 iPseU_CNN:3.09944152840913e-05;iRNA_PseU:1 8092 chr9 132636877 132636877 1 + G A STAD 132636880 + 132636860 132636900 41 GTGCATTCACCTAAAGCGCTTTCGGCACGAGGTGATGTACT GTGCATTCACCTAAAGCACTTTCGGCACGAGGTGATGTACT < 41bp 1 0.229522085431587 1 0.998840928077698 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132636880 chr9:132636877 nonsynonymous SNV 0.976 3 18 hPsi_associated_SNPs_1540 0 0 0 0 1 chromatin 1 0.447767859934433 0.00231814384460405 1 hPsi_site_8092 iPseU_CNN:0.00231814384460405;iRNA_PseU:1 8093 chr19 10791720 10791720 1 + G A STAD 10791716 + 10791696 10791736 41 ACGCACTGCGGCTCGCTGCCTTCGGCCAGCTCCATAAAGTC ACGCACTGCGGCTCGCTGCCTTCGACCAGCTCCATAAAGTC < 41bp 1 0.198189222784666 1 0.98964524269104 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10791716 chr19:10791720 nonsynonymous SNV 0.907 2 25 hPsi_associated_SNPs_1541 0 0 1 0 2 Cytosol 1 0.439181581537139 0.0207095146179199 1 hPsi_site_8093 iPseU_CNN:0.0207095146179199;iRNA_PseU:1 8094 chr12 104732931 104732931 1 + C A STAD 104732933 + 104732913 104732953 41 TTAGGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG TTAGGAACGTGTTGTGGGATTTCACGTACTGGGTCCAAATG < 41bp 1 0.194405908148646 1 0.999920904636383 experiment 1 Functional Loss NA| TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732933 chr12:104732931 synonymous SNV . 0 19 hPsi_associated_SNPs_1542 0 0 1 0 1 Ribosome 1 0.438819812309441 0.000158190727234109 1 hPsi_site_8094 iPseU_CNN:0.000158190727234109;iRNA_PseU:1 8095 chr2 27276775 27276775 1 + G A STAD 27276786 + 27276766 27276806 41 GACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCGTTTCG GACAGAGACACAGTTTGTGTTATCCTTTGTTCATCGTTTCG < 41bp 1 0.401719749437902 1 0.999871611595154 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27276786 chr2:27276775 synonymous SNV . 0 10 hPsi_associated_SNPs_1543 0 0 0 0 1 Cytosol 1 0.440933321540083 0.000256776809691939 1 hPsi_site_8095 iPseU_CNN:0.000256776809691939;iRNA_PseU:1 8096 chr8 38095671 38095671 1 + G A STAD 38095652 + 38095632 38095672 41 CAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGT CAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGAT < 41bp 1 0.202651277218367 1 0.978801429271698 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095652 chr8:38095671 nonsynonymous SNV 0.947 3 40 hPsi_associated_SNPs_1544 0 0 1 0 2 chromatin 1 0.997758650635741 0.042397141456604 0.0044826987285187 hPsi_site_8096 iPseU_CNN:0.042397141456604;iRNA_PseU:0.0044826987285187 8097 chr3 47888100 47888100 1 + G A STAD 47888104 + 47888084 47888124 41 GGCCCCTCCCTGCGCCGGAATGTGGGCTTCCAGGTGCGGTT GGCCCCTCCCTGCGCCAGAATGTGGGCTTCCAGGTGCGGTT < 41bp 1 0.0958720097044746 1 0.969892263412476 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47888104 chr3:47888100 nonsynonymous SNV 0.996 0 17 hPsi_associated_SNPs_1545 0 0 1 0 0 Cytosol 1 0.438718593013917 0.0602154731750479 1 hPsi_site_8097 iPseU_CNN:0.0602154731750479;iRNA_PseU:1 8098 chr6 33179049 33179049 1 + C T STAD 33179034 + 33179014 33179054 41 GGAGAAGGGGATGGAGAAGATGTGAGCTCAGACTCCGCCCC GGAGAAGGGGATGGAGAAGATGTGAGCTCAGACTCTGCCCC < 41bp 1 0.381780670994238 1 0.98609185218811 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RING1 ENSG00000204227 CDS Human protein_coding chr6:33179034 chr6:33179049 synonymous SNV . 0 36 hPsi_associated_SNPs_1546 0 0 1 0 0 Ribosome 1 0.441091040383117 0.02781629562378 1 hPsi_site_8098 iPseU_CNN:0.02781629562378;iRNA_PseU:1 8099 chr19 11548910 11548910 1 + G A STAD 11548911 + 11548891 11548931 41 GCTGCGATGGAACAGACGAGTACAACAGCGGCGTCATCTGT GCTGCGATGGAACAGACGAATACAACAGCGGCGTCATCTGT < 41bp 1 0.414287831671709 1 0.978888154029846 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548911 chr19:11548910 synonymous SNV . 0 20 hPsi_associated_SNPs_1547 0 0 1 0 2 Nucleus 1 0.49103667265601 0.0422236919403081 1 hPsi_site_8099 iPseU_CNN:0.0422236919403081;iRNA_PseU:1 8100 chr4 159825674 159825674 1 + A T STAD 159825660 + 159825640 159825680 41 CTGTTGACTGCTATTGCCAGTACTCATTCTCCTTATGTGGC CTGTTGACTGCTATTGCCAGTACTCATTCTCCTTTTGTGGC < 41bp 1 0.351890365819293 1 0.989001154899597 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159825660 chr4:159825674 nonsynonymous SNV 0.819 1 35 hPsi_associated_SNPs_1548 0 0 1 0 1 Ribosome 1 0.999990762010469 0.0219976902008061 1.84759790617939e-05 hPsi_site_8100 iPseU_CNN:0.0219976902008061;iRNA_PseU:1.84759790617939e-05 8101 chr9 132980177 132980177 1 + C T STAD 132980184 + 132980164 132980204 41 TCCAGAAGATCTACAAGCAATTCTTCCCGTTCGGAGACCCC TCCAGAAGATCTATAAGCAATTCTTCCCGTTCGGAGACCCC < 41bp 1 0.57520237081626 1 0.938847661018372 experiment 0.849595258367479 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NCS1 ENSG00000107130 CDS Human protein_coding chr9:132980184 chr9:132980177 synonymous SNV . 0 14 hPsi_associated_SNPs_1549 0 0 0 0 2 Cytosol 1 0.734108841782735 0.122304677963256 0.531782316434529 hPsi_site_8101 iPseU_CNN:0.122304677963256;iRNA_PseU:0.531782316434529 8102 chr2 27598769 27598769 1 + C T STAD 27598782 + 27598762 27598802 41 AGGTGCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAG AGGTGCGTCTGGAACTGGCTTTTGAATACCTCATGAGCAAG < 41bp 1 0.615392696622765 1 0.999866008758545 experiment 0.769214606754469 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SNX17 ENSG00000115234 CDS Human protein_coding chr2:27598782 chr2:27598769 synonymous SNV . 0 8 hPsi_associated_SNPs_1550 0 0 0 0 2 Ribosome 1 0.532309866001276 0.000267982482909934 0.935380267997448 hPsi_site_8102 iPseU_CNN:0.000267982482909934;iRNA_PseU:0.935380267997448 not specified not specified 8103 chr3 32769301 32769301 1 + A G STAD 32769292 + 32769272 32769312 41 CGAATGTCTGATTGAAGCTGTTCAGGTTTATCATGCAAATC CGAATGTCTGATTGAAGCTGTTCAGGTTTGTCATGCAAATC < 41bp 1 0.625864703483615 1 0.791468620300293 experiment 0.748270593032771 Functional Loss NA| CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32769292 chr3:32769301 nonsynonymous SNV 0.999 4 30 hPsi_associated_SNPs_1555 0 0 1 0 1 Endoplasmic reticulum 1 0.998776420910895 0.417062759399414 0.00244715817821062 hPsi_site_8103 iPseU_CNN:0.417062759399414;iRNA_PseU:0.00244715817821062 8104 chr22 29695771 29695771 1 + C G STAD 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGGGCCCCTGGACCTTTGATGGAACAGATGGGAGG < 41bp 1 0.503645429343491 1 0.999942123889923 experiment 0.992709141313018 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695771 nonsynonymous SNV 0.985 2 10 hPsi_associated_SNPs_1556 0 0 1 0 1 Cytosol 1 0.438720905998445 0.000115752220154031 1 hPsi_site_8104 iPseU_CNN:0.000115752220154031;iRNA_PseU:1 8105 chr18 73000349 73000349 1 + G A STAD 73000352 + 73000332 73000372 41 GACACACTTGGGCTTCAGCCTGAAGGATCTCTCCAAGCTGC GACACACTTGGGCTTCAACCTGAAGGATCTCTCCAAGCTGC < 41bp 1 0.352695534047377 1 0.837791085243225 experiment 1 Functional Loss NA| TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:73000352 chr18:73000349 nonsynonymous SNV 1.000 2 18 hPsi_associated_SNPs_1557 0 0 1 0 0 Cytosol 1 0.493167447337229 0.32441782951355 1 hPsi_site_8105 iPseU_CNN:0.32441782951355;iRNA_PseU:1 8106 chr5 137729022 137729022 1 + A G STAD 137729026 + 137729006 137729046 41 AAGGAACAGGAGCAAGATGATTCTACTGTAGCCTGCCGTTT AAGGAACAGGAGCAAGGTGATTCTACTGTAGCCTGCCGTTT < 41bp 1 0.449680242203739 1 0.990273594856262 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KDM3B ENSG00000120733 CDS Human protein_coding chr5:137729026 chr5:137729022 nonsynonymous SNV 1.000 3 17 hPsi_associated_SNPs_1558 0 0 1 0 1 Nucleus 1 0.533759691429859 0.019452810287476 0.932480617140282 hPsi_site_8106 iPseU_CNN:0.019452810287476;iRNA_PseU:0.932480617140282 8107 chr22 45571922 45571922 1 + G A STAD 45571919 + 45571899 45571939 41 ACATAACCAGTGCCCCTCCCTTCGCCAGTGCAAAGGCAGCG ACATAACCAGTGCCCCTCCCTTCACCAGTGCAAAGGCAGCG < 41bp 1 0.54302276974972 1 0.909537672996521 experiment 0.913954460500561 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUP50 ENSG00000093000 CDS Human protein_coding chr22:45571919 chr22:45571922 nonsynonymous SNV 0.020 0 24 hPsi_associated_SNPs_1559 0 0 1 0 1 Ribosome 1 0.452759467408268 0.180924654006958 1 hPsi_site_8107 iPseU_CNN:0.180924654006958;iRNA_PseU:1 8108 chr20 2840753 2840753 1 + C A STAD 2840762 + 2840742 2840782 41 TGAGGCCAGTGCTCGATATATACTCTGCTTCCGGCATGCCT TGAGGCCAGTGATCGATATATACTCTGCTTCCGGCATGCCT < 41bp 1 0.471282680304364 1 0.999938905239105 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840762 chr20:2840753 nonsynonymous SNV 0.916 2 12 hPsi_associated_SNPs_1560 0 0 1 0 2 chromatin 1 0.465078549261179 0.000122189521789995 1 hPsi_site_8108 iPseU_CNN:0.000122189521789995;iRNA_PseU:1 8109 chrX 51644767 51644767 1 + G A STAD 51644776 + 51644756 51644796 41 AGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG AGCAAGAACCCACATGGGAATTGGAGATGAGGCTGTGTCTG < 41bp 1 0.175001507066735 1 0.992798566818237 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644776 chrX:51644767 nonsynonymous SNV 1.000 4 12 hPsi_associated_SNPs_1561 0 0 1 0 0 chromatin 1 0.455099173923008 0.0144028663635261 1 hPsi_site_8109 iPseU_CNN:0.0144028663635261;iRNA_PseU:1 8110 chr17 58024111 58024111 1 + A G STAD 58024103 + 58024083 58024123 41 GCCATACAAAAAACAAGCTTTTCCCATGATCTCCAAACGGC GCCATACAAAAAACAAGCTTTTCCCATGGTCTCCAAACGGC < 41bp 1 0.351394514663811 1 0.826042652130127 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58024103 chr17:58024111 nonsynonymous SNV 1.000 1 29 hPsi_associated_SNPs_1562 0 0 0 0 0 Ribosome 1 0.43904062535466 0.347914695739746 1 hPsi_site_8110 iPseU_CNN:0.347914695739746;iRNA_PseU:1 8111 chr19 990308 990308 1 + G A STAD 990305 + 990285 990325 41 TCCCCATCACGGACCTGCACTGCGGCTTTGGGGGCCCCCTG TCCCCATCACGGACCTGCACTGCAGCTTTGGGGGCCCCCTG < 41bp 1 0.0932073733971246 1 0.625132977962494 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDR18 ENSG00000065268 CDS Human protein_coding chr19:990305 chr19:990308 nonsynonymous SNV 0.847 3 24 hPsi_associated_SNPs_1563 0 0 1 0 1 Ribosome 1 0.438726646482657 0.749734044075012 1 hPsi_site_8111 iPseU_CNN:0.749734044075012;iRNA_PseU:1 8112 chr1 235594095 235594095 1 + T G STAD 235594083 + 235594063 235594103 41 ACGCTTTCTGTACTGAAGGTTTTAGTCCTCAATCAAACAGG ACGCTTTCTGTACTGAAGGTTTTAGTCCTCAAGCAAACAGG < 41bp 1 0.567814667352339 1 0.99957400560379 experiment 0.864370665295322 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235594083 chr1:235594095 nonsynonymous SNV 0.019 3 33 hPsi_associated_SNPs_1564 0 0 1 0 2 chromatin 1 0.439398305206101 0.0008519887924201 1 hPsi_site_8112 iPseU_CNN:0.0008519887924201;iRNA_PseU:1 8113 chr1 215781446 215781446 1 + C T STAD 215781433 + 215781413 215781453 41 TGATCTCTACTCAGCCAGGTTCTACTCCTTTAGCGTCATTC TGATCTCTACTCAGCCAGGTTCTACTCCTTTAGTGTCATTC < 41bp 1 0.386438178391195 1 0.999923706054688 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215781433 chr1:215781446 nonsynonymous SNV 0.986 4 34 hPsi_associated_SNPs_1566 0 0 1 0 2 Ribosome 1 0.455640424020298 0.00015258789062389 1 hPsi_site_8113 iPseU_CNN:0.00015258789062389;iRNA_PseU:1 8114 chr1 107599750 107599750 1 + G T STAD 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACGTCCTGCCGGTACCAGTGGAGACTGTAGAGTTGCCGG < 41bp 1 0.0464012412455933 1 0.999587833881378 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599750 nonsynonymous SNV 0.818 3 15 hPsi_associated_SNPs_1567 0 0 1 0 0 Ribosome 1 0.438720081356845 0.000824332237244096 1 hPsi_site_8114 iPseU_CNN:0.000824332237244096;iRNA_PseU:1 8115 chr17 78079611 78079611 1 + G A STAD 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGACACCGTCCCCACTCTACAGCGTGGAGTTCTCCG < 41bp 1 0.0932370587500818 1 0.994282603263855 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079611 nonsynonymous SNV 0.001 1 8 hPsi_associated_SNPs_1568 0 0 1 0 2 Endoplasmic reticulum 1 0.461927509831956 0.01143479347229 1 hPsi_site_8115 iPseU_CNN:0.01143479347229;iRNA_PseU:1 8116 chr10 126655251 126655251 1 + C A STAD 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGATTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA < 41bp 1 0.305198818991335 1 0.999957919120789 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655251 synonymous SNV . 0 6 hPsi_associated_SNPs_1569 0 0 1 0 2 Ribosome 1 0.444364376743656 8.41617584219634e-05 1 hPsi_site_8116 iPseU_CNN:8.41617584219634e-05;iRNA_PseU:1 8117 chr1 156314421 156314421 1 + T C TGCT 156314408 + 156314388 156314428 41 GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCTCCCCCAG GCTAATGCTGTGCCTCTCTGTAGAGCAAAACCCCCCCCCAG < 41bp 1 0.333408702385303 1 0.999786138534546 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSACC ENSG00000163467 CDS Human protein_coding chr1:156314408 chr1:156314421 nonsynonymous SNV 0.978 3 34 hPsi_associated_SNPs_1570 0 0 0 0 2 chromatin 1 0.4387821804717 0.000427722930907981 1 hPsi_site_8117 iPseU_CNN:0.000427722930907981;iRNA_PseU:1 8118 chr12 110565264 110565264 1 + G T TGCT 110565261 + 110565241 110565281 41 AGAACTATAATTTAATCACGTTTGATTCCTTGGAGCCAATG AGAACTATAATTTAATCACGTTTTATTCCTTGGAGCCAATG < 41bp 1 0.414032155321555 1 0.836901426315308 experiment 1 Functional Loss NA| IFT81 ENSG00000122970 CDS Human protein_coding chr12:110565261 chr12:110565264 nonsynonymous SNV 1.000 4 24 hPsi_associated_SNPs_1571 0 0 1 0 1 Cytosol 1 0.43871864859119 0.326197147369384 1 hPsi_site_8118 iPseU_CNN:0.326197147369384;iRNA_PseU:1 8119 chr2 32667481 32667481 1 + G T TGCT 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAATTATA < 41bp 1 0.424894375047845 1 0.984906673431396 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667481 nonsynonymous SNV 1.000 5 37 hPsi_associated_SNPs_1572 0 0 1 0 2 Nucleus 1 0.438719835325614 0.0301866531372079 1 hPsi_site_8119 iPseU_CNN:0.0301866531372079;iRNA_PseU:1 8120 chr1 116932301 116932301 1 + T G THCA 116932284 + 116932264 116932304 41 GCTGTCATCTTCCTCATCGGTATCATCGTAGCCAATGTGCC GCTGTCATCTTCCTCATCGGTATCATCGTAGCCAATGGGCC < 41bp 1 0.568422416175014 1 0.999979496002197 experiment 0.863155167649971 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116932284 chr1:116932301 nonsynonymous SNV 0.932 5 38 hPsi_associated_SNPs_1573 1 0 1 0 1 Nucleus 1 0.438718593724733 4.10079956059128e-05 1 hPsi_site_8120 iPseU_CNN:4.10079956059128e-05;iRNA_PseU:1 8121 chr2 233431861 233431861 1 + G T THCA 233431858 + 233431838 233431878 41 AGCCCGAATCCGGGACACACTTCGGCGAGTGCTTAACCTAC AGCCCGAATCCGGGACACACTTCTGCGAGTGCTTAACCTAC < 41bp 1 0.204872233630186 1 6.87241554260254e-05 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233431858 chr2:233431861 nonsynonymous SNV 0.999 2 24 hPsi_associated_SNPs_1574 0 0 1 0 2 Ribosome 1 0.438769866200997 1 1 hPsi_site_8121 iPseU_CNN:1;iRNA_PseU:1 8122 chr11 68369335 68369335 1 + A G THCA 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACAGAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA < 41bp 1 0.152499328051501 1 0.96270090341568 experiment 1 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369335 nonsynonymous SNV 1.000 1 4 hPsi_associated_SNPs_1575 0 0 0 0 1 Nucleus 1 0.509499969734489 0.0745981931686399 0.981000060531021 hPsi_site_8122 iPseU_CNN:0.0745981931686399;iRNA_PseU:0.981000060531021 8123 chr17 30687706 30687706 1 + C A THCA 30687721 + 30687701 30687741 41 CTGTTCAACCTCAGCAAGGTTATATTCCTCCAATGGCACAG CTGTTAAACCTCAGCAAGGTTATATTCCTCCAATGGCACAG < 41bp 1 0.356821754425225 1 0.999204277992249 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30687721 chr17:30687706 nonsynonymous SNV 1.000 1 6 hPsi_associated_SNPs_1576 0 0 1 1 1 Ribosome 1 0.440436317161015 0.00159144401550204 1 hPsi_site_8123 iPseU_CNN:0.00159144401550204;iRNA_PseU:1 8124 chr12 13028524 13028524 1 + G A THCA 13028512 + 13028492 13028532 41 GGCCATCGTGGCTAAACAGGTACTGCTGGGCCGGAAGGTGG GGCCATCGTGGCTAAACAGGTACTGCTGGGCCAGAAGGTGG < 41bp 1 0.384089599808078 1 0.990336298942566 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL13AP20 ENSG00000234498 ncRNA_exonic Human processed_pseudogene chr12:13028512 chr12:13028524 . . 0 33 hPsi_associated_SNPs_1577 0 0 0 0 0 unknown 1 0.440025120004352 0.0193274021148679 1 hPsi_site_8124 iPseU_CNN:0.0193274021148679;iRNA_PseU:1 8125 chr14 68053956 68053956 1 + T C THCA 68053954 + 68053934 68053974 41 GGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCC GGGGCCAACGTTGCTGTGAATACTTCTCCTACCCGATTCCC < 41bp 1 0.575293880698102 1 0.998870074748993 experiment 0.849412238603797 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68053954 chr14:68053956 nonsynonymous SNV . 0 23 hPsi_associated_SNPs_1578 0 0 1 2 0 Endoplasmic reticulum 1 0.475452692619695 0.00225985050201394 1 hPsi_site_8125 iPseU_CNN:0.00225985050201394;iRNA_PseU:1 8126 chr12 98992417 98992417 1 + C T THYM 98992435 + 98992415 98992455 41 AGCCAGGTTATGCCAACACTTTGAGGGATGCAGCTCCCAAA AGTCAGGTTATGCCAACACTTTGAGGGATGCAGCTCCCAAA < 41bp 1 0.23092007500114 1 0.895168960094452 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992435 chr12:98992417 nonsynonymous SNV 0.998 3 3 hPsi_associated_SNPs_1579 0 0 1 0 0 Ribosome 1 0.456383208319154 0.209662079811096 1 hPsi_site_8126 iPseU_CNN:0.209662079811096;iRNA_PseU:1 8127 chr10 93602097 93602097 1 + G T THYM 93602098 + 93602078 93602118 41 GTTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG GTTGTCTTCTCCTGATAATTTAAATTGCCGCGATACCCAAG < 41bp 1 0.459279930216807 1 0.999873161315918 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93602098 chr10:93602097 nonsynonymous SNV 1.000 2 20 hPsi_associated_SNPs_1580 0 0 1 0 1 Ribosome 1 0.442671286494043 0.000253677368164062 1 hPsi_site_8127 iPseU_CNN:0.000253677368164062;iRNA_PseU:1 8128 chr1 27177685 27177685 1 + C T THYM 27177678 + 27177658 27177698 41 CCATTCTGGGCCTCTCAGGGTTTCACACGTACCTCGTCGCC CCATTCTGGGCCTCTCAGGGTTTCACATGTACCTCGTCGCC < 41bp 1 0.38903135615795 1 0.99992823600769 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZDHHC18 ENSG00000204160 CDS Human protein_coding chr1:27177678 chr1:27177685 nonsynonymous SNV 0.985 4 28 hPsi_associated_SNPs_1581 0 0 1 0 1 Ribosome 1 0.438868626289109 0.000143527984620029 1 hPsi_site_8128 iPseU_CNN:0.000143527984620029;iRNA_PseU:1 8129 chr12 57627039 57627039 1 + G T THYM 57627054 + 57627034 57627074 41 CATTTGAGGACCGAATCAACTTTGCCGTGTTCCCATCCCTG CATTTTAGGACCGAATCAACTTTGCCGTGTTCCCATCCCTG < 41bp 1 0.171473652092111 1 0.979530274868011 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627054 chr12:57627039 stopgain 1.000 1 6 hPsi_associated_SNPs_1582 0 0 1 0 2 Cytosol 1 0.657194042228727 0.0409394502639779 0.685611915542546 hPsi_site_8129 iPseU_CNN:0.0409394502639779;iRNA_PseU:0.685611915542546 8130 chr6 24503567 24503567 1 + G A THYM 24503574 + 24503554 24503594 41 TCTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACAC TCTGAGGAAGCCCACCGTGTTTACGGAGACATTATCCACAC < 41bp 1 0.180427838824629 1 0.999999284744263 experiment 1 Functional Loss NA| ALDH5A1 ENSG00000112294 CDS Human protein_coding chr6:24503574 chr6:24503567 nonsynonymous SNV 0.693 4 14 hPsi_associated_SNPs_1583 1 0 1 0 2 Nucleus 1 0.438966038674285 1.43051147394324e-06 1 hPsi_site_8130 iPseU_CNN:1.43051147394324e-06;iRNA_PseU:1 8131 chr17 78085845 78085845 1 + C T THYM 78085836 + 78085816 78085856 41 CTGTGCCTCCAGCCACCAGTTTCTCTCCACACACTACAACC CTGTGCCTCCAGCCACCAGTTTCTCTCCATACACTACAACC < 41bp 1 0.246461892611004 1 0.989463806152344 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78085836 chr17:78085845 nonsynonymous SNV 0.993 1 30 hPsi_associated_SNPs_1584 0 0 1 0 2 Endoplasmic reticulum 1 0.437953999302511 0.0210723876953121 1 hPsi_site_8131 iPseU_CNN:0.0210723876953121;iRNA_PseU:1 8132 chr11 489454 489454 1 + C T UCEC 489437 + 489417 489457 41 TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTCGAG TCGCCTTCCAGTTCACGCCGTACAGCTGGGTTCGCTTTGAG < 41bp 1 0.361321701516372 1 0.999997615814209 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489437 chr11:489454 synonymous SNV . 0 38 hPsi_associated_SNPs_1585 0 0 1 0 2 Ribosome 1 0.473278345520001 4.76837158203125e-06 1 hPsi_site_8132 iPseU_CNN:4.76837158203125e-06;iRNA_PseU:1 8133 chrX 154282916 154282916 1 + T G UCEC 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTGCGGAGGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.193302728633031 1 0.998374342918396 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282916 nonsynonymous SNV 0.999 2 13 hPsi_associated_SNPs_1586 0 0 1 0 1 Ribosome 1 0.440255948481921 0.00325131416320801 1 hPsi_site_8133 iPseU_CNN:0.00325131416320801;iRNA_PseU:1 8134 chr3 152553971 152553971 1 + A G UCEC 152553956 + 152553936 152553976 41 CCATGTGTAAACTGCAGAGGTTCATCTTTCATGTGAACCTC CCATGTGTAAACTGCAGAGGTTCATCTTTCATGTGGACCTC < 41bp 1 0.311063738045741 1 0.996423006057739 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553956 chr3:152553971 nonsynonymous SNV 0.995 4 36 hPsi_associated_SNPs_1587 0 0 1 0 0 Endoplasmic reticulum 1 0.43872244449137 0.00715398788452193 1 hPsi_site_8134 iPseU_CNN:0.00715398788452193;iRNA_PseU:1 8135 chr3 127783729 127783729 1 + T C UCEC 127783739 + 127783719 127783759 41 GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCT GGAATGGAATCTGAAGGTGCTATCATCGCACTTTTCCATCT < 41bp 1 0.613324727890021 1 0.999999761581421 experiment 0.773350544219958 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127783739 chr3:127783729 nonsynonymous SNV 0.829 4 11 hPsi_associated_SNPs_1588 0 0 1 0 2 Ribosome 1 0.652259664585807 4.7683715798108e-07 0.695480670828386 hPsi_site_8135 iPseU_CNN:4.7683715798108e-07;iRNA_PseU:0.695480670828386 8136 chr2 152311502 152311502 1 + C A UCEC 152311498 + 152311478 152311518 41 AACTTATTGTGAAAGTGATCTATTCTTTCCACACACTGAGC AACTTATTGTGAAAGTGATCTATTATTTCCACACACTGAGC < 41bp 1 0.323886298749716 1 0.743634283542633 experiment 1 Functional Loss NA| RIF1 ENSG00000080345 CDS Human protein_coding chr2:152311498 chr2:152311502 nonsynonymous SNV 0.998 2 25 hPsi_associated_SNPs_1589 0 0 1 0 1 Nucleus 1 0.438718376956272 0.512731432914734 1 hPsi_site_8136 iPseU_CNN:0.512731432914734;iRNA_PseU:1 8137 chr12 123467074 123467074 1 + G T UCEC 123467054 + 123467034 123467074 41 CGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG CGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAT < 41bp 1 0.285391251471233 1 0.997397661209106 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123467054 chr12:123467074 stopgain 0.997 1 41 hPsi_associated_SNPs_1590 0 0 1 0 2 Cytosol 1 0.438719339600457 0.005204677581788 1 hPsi_site_8137 iPseU_CNN:0.005204677581788;iRNA_PseU:1 8138 chr11 43419005 43419005 1 + C A UCEC 43419024 + 43419004 43419044 41 TCTTCACCAGCTATTACACTTTGGGGAATATATATGCAGTA TATTCACCAGCTATTACACTTTGGGGAATATATATGCAGTA < 41bp 1 0.145146245848356 1 0.877019882202148 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TTC17 ENSG00000052841 CDS Human protein_coding chr11:43419024 chr11:43419005 nonsynonymous SNV 1.000 1 2 hPsi_associated_SNPs_1591 0 0 1 0 1 Nucleus 1 0.438719055045922 0.245960235595704 1 hPsi_site_8138 iPseU_CNN:0.245960235595704;iRNA_PseU:1 8139 chr17 39973407 39973407 1 + C T UCEC 39973390 + 39973370 39973410 41 GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGTGAC < 41bp 1 0.566071622125854 1 1 experiment 0.867856755748292 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39973390 chr17:39973407 stopgain 0.992 1 38 hPsi_associated_SNPs_1592 0 0 1 0 2 Nucleus 1 0.488882729058454 0 1 hPsi_site_8139 iPseU_CNN:0;iRNA_PseU:1 8140 chr17 37815329 37815329 1 + A C UCEC 37815318 + 37815298 37815338 41 CTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGG CTGCAGGGTCTGACAATGAATCAGATGAAGACGTTGCTGGG < 41bp 1 0.130073542037286 1 0.996553659439087 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815318 chr17:37815329 nonsynonymous SNV 0.866 2 32 hPsi_associated_SNPs_1593 0 0 1 0 1 Ribosome 1 0.456012077631917 0.00689268112182595 1 hPsi_site_8140 iPseU_CNN:0.00689268112182595;iRNA_PseU:1 8141 chr5 72199550 72199550 1 + T G UCEC 72199553 + 72199533 72199573 41 CAGGATTTTATATTTTTTTGTGATGCCGTTGCATCATGGAT CAGGATTTTATATTTTTGTGTGATGCCGTTGCATCATGGAT < 41bp 1 0.129148064445064 1 0.944162786006927 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72199553 chr5:72199550 nonsynonymous SNV 1.000 1 18 hPsi_associated_SNPs_1595 0 0 1 0 2 Cytosol 1 0.500314295304425 0.111674427986146 0.999371409391149 hPsi_site_8141 iPseU_CNN:0.111674427986146;iRNA_PseU:0.999371409391149 8142 chr15 43452943 43452943 1 + G T UCEC 43452932 + 43452912 43452952 41 ATATTTTCTGTTCAAGAGAATAATCATCTCAGTTTTGATCC ATATTTTCTGTTCAAGAGAATAATCATCTCATTTTTGATCC < 41bp 1 0.414957012225485 1 0.99666440486908 experiment 1 Functional Loss NA| TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43452932 chr15:43452943 nonsynonymous SNV 0.989 2 32 hPsi_associated_SNPs_1596 0 0 0 0 2 chromatin 1 0.438719147310495 0.00667119026183993 1 hPsi_site_8142 iPseU_CNN:0.00667119026183993;iRNA_PseU:1 8143 chr11 64950378 64950378 1 + G A UCEC 64950363 + 64950343 64950383 41 TGATGAGGCCTTCCCCCCGGTACCCCAGAGCCTGGGTTACA TGATGAGGCCTTCCCCCCGGTACCCCAGAGCCTGGATTACA < 41bp 1 0.653319875585931 1 0.98149049282074 experiment 0.693360248828139 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950363 chr11:64950378 nonsynonymous SNV 0.879 4 36 hPsi_associated_SNPs_1598 0 0 1 0 1 Ribosome 1 0.908273196209859 0.0370190143585201 0.183453607580282 hPsi_site_8143 iPseU_CNN:0.0370190143585201;iRNA_PseU:0.183453607580282 8144 chr11 124829863 124829863 1 + G T UCEC 124829879 + 124829859 124829899 41 AAGAGAATCAGAACGAATTATTCCAACAACAAGCCCAGGCT AAGATAATCAGAACGAATTATTCCAACAACAAGCCCAGGCT < 41bp 1 0.41678800518168 1 0.994376540184021 experiment 1 Functional Loss NA| CCDC15 ENSG00000149548 CDS Human protein_coding chr11:124829879 chr11:124829863 nonsynonymous SNV 0.167 3 5 hPsi_associated_SNPs_1599 0 0 0 0 1 chromatin 1 0.438719051934965 0.011246919631958 1 hPsi_site_8144 iPseU_CNN:0.011246919631958;iRNA_PseU:1 8145 chr20 47693561 47693561 1 + C A UCEC 47693543 + 47693523 47693563 41 ATTACACAAGCAAATGAACTTGTAAACCTAACTGAGTTCTT ATTACACAAGCAAATGAACTTGTAAACCTAACTGAGTTATT < 41bp 1 0.385932800800134 1 0.95389461517334 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47693543 chr20:47693561 nonsynonymous SNV 0.999 4 39 hPsi_associated_SNPs_1600 0 0 1 0 2 Nucleus 1 0.440831948793662 0.0922107696533201 1 hPsi_site_8145 iPseU_CNN:0.0922107696533201;iRNA_PseU:1 8146 chr9 36083431 36083431 1 + G A UCEC 36083425 + 36083405 36083445 41 CCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTC CCGAGAATACTGTCAAGCCATTTTTCAAACAGACTCTTCTC < 41bp 1 0.488688003065804 1 0.992669641971588 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RECK ENSG00000122707 CDS Human protein_coding chr9:36083425 chr9:36083431 nonsynonymous SNV 1.000 3 27 hPsi_associated_SNPs_1601 0 0 0 0 1 exosome 1 0.440559108215786 0.014660716056824 1 hPsi_site_8146 iPseU_CNN:0.014660716056824;iRNA_PseU:1 8147 chr10 116734969 116734969 1 + A C UCEC 116734957 + 116734937 116734977 41 TACGCTAGAAGAACATGCCCTTCCTGAAGACAAATGGACAA TACGCTAGAAGAACATGCCCTTCCTGAAGACACATGGACAA < 41bp 1 0.674454885526237 1 0.99900209903717 experiment 0.651090228947527 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116734957 chr10:116734969 nonsynonymous SNV 0.963 0 33 hPsi_associated_SNPs_1602 0 0 1 0 1 Ribosome 1 0.438681997525995 0.00199580192566007 1 hPsi_site_8147 iPseU_CNN:0.00199580192566007;iRNA_PseU:1 8148 chr5 170818337 170818337 1 + A G UCEC 170818349 + 170818329 170818369 41 AAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATT AAAGGATGGGTTGCACATTGTTGAAGCAGAGGCAATGAATT < 41bp 1 0.559666072232307 1 0.953694343566895 experiment 0.880667855535386 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NPM1 ENSG00000181163 CDS Human protein_coding chr5:170818349 chr5:170818337 nonsynonymous SNV 0.924 3 9 hPsi_associated_SNPs_1603 0 0 1 0 2 Ribosome 1 0.438909004482107 0.09261131286621 1 hPsi_site_8148 iPseU_CNN:0.09261131286621;iRNA_PseU:1 8149 chr6 36884249 36884249 1 + T A UCEC 36884262 + 36884242 36884282 41 ACAAATGTTACGTGAGCTTTTTCCTGTTTTCACTCACCTGC ACAAATGATACGTGAGCTTTTTCCTGTTTTCACTCACCTGC < 41bp 1 0.579137477097782 1 0.999546647071838 experiment 0.841725045804436 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock C6orf89 ENSG00000198663 CDS Human protein_coding chr6:36884262 chr6:36884249 nonsynonymous SNV 0.348 4 8 hPsi_associated_SNPs_1604 0 0 1 0 1 Endoplasmic reticulum 1 0.946394585233648 0.000906705856323908 0.107210829532704 hPsi_site_8149 iPseU_CNN:0.000906705856323908;iRNA_PseU:0.107210829532704 8150 chr7 100470806 100470806 1 + C G UCEC 100470817 + 100470797 100470837 41 TGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCTG TGTGGGCTGGTGCTCTCCTCTGAGGGCGAGTGTCAGGGCTG < 41bp 1 0.425260290780431 1 0.415358394384384 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470817 chr7:100470806 nonsynonymous SNV 0.997 2 10 hPsi_associated_SNPs_1605 0 0 1 0 1 Ribosome 1 0.438718638476396 1 1 hPsi_site_8150 iPseU_CNN:1;iRNA_PseU:1 8151 chrX 51644781 51644781 1 + G T UCEC 51644776 + 51644756 51644796 41 AGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG AGCAAGAACCCGCATGGGAATTGGATATGAGGCTGTGTCTG < 41bp 1 0.483996001919975 1 0.997710287570953 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644776 chrX:51644781 nonsynonymous SNV 1.000 4 26 hPsi_associated_SNPs_1606 0 0 1 0 0 chromatin 1 0.43845176495962 0.00457942485809393 1 hPsi_site_8151 iPseU_CNN:0.00457942485809393;iRNA_PseU:1 8152 chr13 32937657 32937657 1 + C A UCEC 32937642 + 32937622 32937662 41 TCCTGATGCCTGTACACCTCTTGAAGCCCCAGAATCTCTTA TCCTGATGCCTGTACACCTCTTGAAGCCCCAGAATATCTTA < 41bp 1 0.269264025774793 1 0.962521016597748 experiment 1 Functional Loss NA| BRCA2 ENSG00000139618 CDS Human protein_coding chr13:32937642 chr13:32937657 nonsynonymous SNV 0.998 5 36 hPsi_associated_SNPs_1607 0 0 1 0 1 Nucleus 1 0.438720841020351 0.074957966804504 1 hPsi_site_8152 iPseU_CNN:0.074957966804504;iRNA_PseU:1 8153 chr6 31937301 31937301 1 + G A UCEC 31937314 + 31937294 31937334 41 CTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCC CTTCTCCAAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCC < 41bp 1 0.125580788441605 1 0.205783605575562 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31937314 chr6:31937301 nonsynonymous SNV 0.980 3 8 hPsi_associated_SNPs_1608 0 0 1 0 1 chromatin 1 0.445202085159251 1 1 hPsi_site_8153 iPseU_CNN:1;iRNA_PseU:1 8154 chr14 31204039 31204039 1 + T C UCEC 31204038 + 31204018 31204058 41 TATATGGCTGCAGTGAGCTTTTTAATGCTACACAGTTCATA TATATGGCTGCAGTGAGCTTTCTAATGCTACACAGTTCATA < 41bp 1 0.21364442305479 1 0.920332849025726 experiment 1 Functional Loss NA| SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31204038 chr14:31204039 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_1609 0 0 1 0 2 Cytosol 1 0.442247889285677 0.159334301948548 1 hPsi_site_8154 iPseU_CNN:0.159334301948548;iRNA_PseU:1 8155 chr5 162900414 162900414 1 + A C UCEC 162900423 + 162900403 162900443 41 GGAAAAATACAAGCTAGATATTGCCCAGTTAGAAGAAAATT GGAAAAATACACGCTAGATATTGCCCAGTTAGAAGAAAATT < 41bp 1 0.0952194433777064 1 0.824987769126892 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HMMR ENSG00000072571 CDS Human protein_coding chr5:162900423 chr5:162900414 nonsynonymous SNV 0.978 3 12 hPsi_associated_SNPs_1610 0 0 1 0 1 Cytosol 1 0.43863716499641 0.350024461746216 1 hPsi_site_8155 iPseU_CNN:0.350024461746216;iRNA_PseU:1 8156 chr8 19677916 19677916 1 + G T UCEC 19677912 + 19677892 19677932 41 TTATTTGAAACTCTTCCTGGTCGGGTCCAGTGTGAAATGTT TTATTTGAAACTCTTCCTGGTCGGTTCCAGTGTGAAATGTT < 41bp 1 0.0908459272017521 1 0.361437559127808 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677912 chr8:19677916 nonsynonymous SNV 0.998 1 25 hPsi_associated_SNPs_1611 0 0 1 0 1 Cytosol 1 0.438718793148235 1 1 hPsi_site_8156 iPseU_CNN:1;iRNA_PseU:1 8157 chr22 20759859 20759859 1 + T C UCEC 20759850 + 20759830 20759870 41 CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTCAGGT CATGGTCTGGGACGTCCCTGTAGAGGAATCCCCCCTCAGGT < 41bp 1 0.151109815207569 1 0.999561131000519 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20759850 chr22:20759859 nonsynonymous SNV 0.001 0 30 hPsi_associated_SNPs_1612 0 0 1 0 0 Cytosol 1 0.438942156101972 0.000877737998961958 1 hPsi_site_8157 iPseU_CNN:0.000877737998961958;iRNA_PseU:1 8158 chr19 14561827 14561827 1 + C T UCEC 14561814 + 14561794 14561834 41 CCACCCCAAGGGGCGGCTGCTGCGAGAAGAGCTCGCTGCGG CCACCCCAAGGGGCGGCTGCTGCGAGAAGAGCTTGCTGCGG < 41bp 1 0.0829196665771431 1 0.999009847640991 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561814 chr19:14561827 synonymous SNV . 0 34 hPsi_associated_SNPs_1613 0 0 1 0 1 Ribosome 1 0.442649364363201 0.00198030471801802 1 hPsi_site_8158 iPseU_CNN:0.00198030471801802;iRNA_PseU:1 8159 chr5 157161638 157161638 1 + G A UCEC 157161649 + 157161629 157161669 41 GTTTTATTGGCGGGATTACTTTGAGGACCAGCCCCTTCTGT GTTTTATTGACGGGATTACTTTGAGGACCAGCCCCTTCTGT < 41bp 1 0.173908327280773 1 0.900843024253845 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control THG1L ENSG00000113272;ENSG00000268432 CDS Human other chr5:157161649 chr5:157161638 stopgain 1.000 1 10 hPsi_associated_SNPs_1614 0 0 1 0 1 Nucleus 1 0.440733008685819 0.19831395149231 1 hPsi_site_8159 iPseU_CNN:0.19831395149231;iRNA_PseU:1 8160 chr7 5256746 5256746 1 + C T UCEC 5256735 + 5256715 5256755 41 TTGCAGGCCTGTGTGCGCTGTCAATCAACAACGACAACTGC TTGCAGGCCTGTGTGCGCTGTCAATCAACAATGACAACTGC < 41bp 1 0.12892334079299 1 0.559161126613617 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5256735 chr7:5256746 synonymous SNV . 0 32 hPsi_associated_SNPs_1615 0 0 1 0 2 Cytosol 1 0.858125929454061 0.881677746772766 0.283748141091877 hPsi_site_8160 iPseU_CNN:0.881677746772766;iRNA_PseU:0.283748141091877 8161 chr20 47602053 47602053 1 + C T UCEC 47602059 + 47602039 47602079 41 TTGTCTCAGCCCTGCGGACATTCCTAGAAGGTTTCCGCCTA TTGTCTCAGCCCTGTGGACATTCCTAGAAGGTTTCCGCCTA < 41bp 1 0.416673310746022 1 0.974489808082581 experiment 1 Functional Loss NA| ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47602059 chr20:47602053 nonsynonymous SNV 0.998 4 15 hPsi_associated_SNPs_1616 0 0 1 0 0 Cytosol 1 0.444938882858118 0.051020383834838 1 hPsi_site_8161 iPseU_CNN:0.051020383834838;iRNA_PseU:1 8162 chr6 80877454 80877454 1 + G A UCEC 80877445 + 80877425 80877465 41 GTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTC GTGAACAAGGAATTGTTGGATTTGGAATCAGAATTGCGGTC < 41bp 1 0.426558637862895 1 0.999991416931152 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BCKDHB ENSG00000083123 CDS Human protein_coding chr6:80877445 chr6:80877454 nonsynonymous SNV 0.966 5 30 hPsi_associated_SNPs_1617 0 0 1 0 2 Ribosome 1 0.438718757576989 1.71661376959786e-05 1 hPsi_site_8162 iPseU_CNN:1.71661376959786e-05;iRNA_PseU:1 8163 chr1 154234142 154234142 1 + G A UCEC 154234130 + 154234110 154234150 41 GTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA GTGAATGCATCGGCCACCCCTTTCCAACAGCCAAGTGGATA < 41bp 1 0.0713787322382328 1 0.846205592155457 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154234130 chr1:154234142 synonymous SNV . 0 33 hPsi_associated_SNPs_1618 0 0 1 0 2 Nucleus 1 0.44387263815982 0.307588815689086 1 hPsi_site_8163 iPseU_CNN:0.307588815689086;iRNA_PseU:1 8164 chr16 88804784 88804784 1 + C T UCEC 88804792 - 88804772 88804812 41 TGCTGCTCTTCCTGGCCCTCTGCACCTGGTGGGCCTGCCAC TGCTGCTCTTCCTGGCCCTCTGCACCTGATGGGCCTGCCAC < 41bp 1 0.0274555301715603 1 0.967812657356262 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804792 chr16:88804784 stopgain 1.000 0 29 hPsi_associated_SNPs_1619 0 0 1 0 1 Endoplasmic reticulum 1 0.438798781591789 0.064374685287476 1 hPsi_site_8164 iPseU_CNN:0.064374685287476;iRNA_PseU:1 8165 chr19 40883791 40883791 1 + C T UCEC 40883773 + 40883753 40883793 41 CACAACAAGTACATGGTGACTGAACGCGCCACCTACATCGG CACAACAAGTACATGGTGACTGAACGCGCCACCTACATTGG < 41bp 1 0.320429373648193 1 0.998387813568115 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883773 chr19:40883791 synonymous SNV . 0 39 hPsi_associated_SNPs_1620 0 0 1 0 2 Endoplasmic reticulum 1 0.438758142697212 0.00322437286376998 1 hPsi_site_8165 iPseU_CNN:0.00322437286376998;iRNA_PseU:1 8166 chr12 994899 994899 1 + A G UCEC 994916 + 994896 994936 41 ACAACCCAAAGCTCCTGGAATTGATGACATAAAGACTCTAG ACAGCCCAAAGCTCCTGGAATTGATGACATAAAGACTCTAG < 41bp 1 0.0447785743615042 1 0.999999463558197 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock WNK1 ENSG00000060237 CDS Human protein_coding chr12:994916 chr12:994899 synonymous SNV . 0 4 hPsi_associated_SNPs_1621 0 0 1 0 0 Ribosome 1 0.685316874312027 1.07288360595703e-06 0.629366251375947 hPsi_site_8166 iPseU_CNN:1.07288360595703e-06;iRNA_PseU:0.629366251375947 8167 chr22 39066939 39066939 1 + G A UCEC 39066942 + 39066922 39066962 41 TTGGAATACGGATCCCCGACTATGAACCTGGCAGGGCAAAG TTGGAATACGGATCCCCAACTATGAACCTGGCAGGGCAAAG < 41bp 1 0.0801432086816103 1 0.994001865386963 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CBY1 ENSG00000100211 CDS Human protein_coding chr22:39066942 chr22:39066939 synonymous SNV . 0 18 hPsi_associated_SNPs_1622 0 0 1 0 2 Ribosome 1 0.439600706373326 0.011996269226074 1 hPsi_site_8167 iPseU_CNN:0.011996269226074;iRNA_PseU:1 8168 chrX 152960082 152960082 1 + C A UCEC 152960065 + 152960045 152960085 41 GGATGAAATGGTGCTGGTCCTTCTTCACCCCGCTGGTCTGC GGATGAAATGGTGCTGGTCCTTCTTCACCCCGCTGGTATGC < 41bp 1 0.153911322789184 1 0.999412775039673 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152960065 chrX:152960082 synonymous SNV . 0 38 hPsi_associated_SNPs_1623 0 0 1 0 2 Ribosome 1 0.438721748676566 0.00117444992065407 1 hPsi_site_8168 iPseU_CNN:0.00117444992065407;iRNA_PseU:1 8169 chr20 13789519 13789519 1 + G T UCEC 13789530 + 13789510 13789550 41 ACTATCCTGGAATGTTTGAATTGATGGAAGATTTACAAGGT ACTATCCTGTAATGTTTGAATTGATGGAAGATTTACAAGGT < 41bp 1 0.0706931172401155 1 0.984129965305328 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13789530 chr20:13789519 nonsynonymous SNV 1.000 3 10 hPsi_associated_SNPs_1624 3 0 1 0 2 Ribosome 1 0.438732326731728 0.0317400693893439 1 hPsi_site_8169 iPseU_CNN:0.0317400693893439;iRNA_PseU:1 8170 chr19 36220990 36220990 1 + C A UCEC 36220991 + 36220971 36221011 41 TCCAGGATGACAAGAAAGTCTTCTGCCAGAAACACACTGAT TCCAGGATGACAAGAAAGTATTCTGCCAGAAACACACTGAT < 41bp 1 0.655462717003951 1 0.999856054782867 experiment 0.689074565992097 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36220991 chr19:36220990 synonymous SNV . 0 20 hPsi_associated_SNPs_1625 0 0 1 0 1 chromatin 1 0.438671480384581 0.000287890434266025 1 hPsi_site_8170 iPseU_CNN:0.000287890434266025;iRNA_PseU:1 8171 chr14 45542717 45542717 1 + A C UCEC 45542732 + 45542712 45542752 41 TCAAAAAGAGTTTGGAGGAATTACTCGATATGACAATTTTA TCAAACAGAGTTTGGAGGAATTACTCGATATGACAATTTTA < 41bp 1 0.585538630947249 1 0.985987067222595 experiment 0.828922738105502 Functional Loss NA| TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45542732 chr14:45542717 nonsynonymous SNV 1.000 0 6 hPsi_associated_SNPs_1626 0 0 1 0 0 unknown 1 0.43898082241018 0.02802586555481 1 hPsi_site_8171 iPseU_CNN:0.02802586555481;iRNA_PseU:1 8172 chrX 153994221 153994221 1 + C T UCEC 153994236 + 153994216 153994256 41 ATACACCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAG ATACATCTCTTGCATGTGGTTCAAATCCTCTGAAGAGAGAG < 41bp 1 0.335008346002356 1 0.997135162353516 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control DKC1 ENSG00000130826 CDS Human protein_coding chrX:153994236 chrX:153994221 nonsynonymous SNV 0.989 4 6 hPsi_associated_SNPs_1627 0 0 1 0 2 Cytosol 1 0.99847397436947 0.00572967529296808 0.00305205126105967 hPsi_site_8172 iPseU_CNN:0.00572967529296808;iRNA_PseU:0.00305205126105967 8173 chr2 74077533 74077533 1 + C A UCEC 74077523 + 74077503 74077543 41 ATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAA ATGAGGAATGAATTTACCATTACCCATGTTATCATCCCCAA < 41bp 1 0.569500001956167 1 0.999110460281372 experiment 0.860999996087665 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077523 chr2:74077533 nonsynonymous SNV 1.000 1 31 hPsi_associated_SNPs_1628 0 0 1 0 1 Ribosome 1 0.438718682519381 0.00177907943725608 1 hPsi_site_8173 iPseU_CNN:0.00177907943725608;iRNA_PseU:1 Aural atresia, congenital Aural atresia, congenital 8174 chr8 33346629 33346629 1 + C T UCEC 33346620 + 33346600 33346640 41 GATTCACCAAGATCACCCAATACCTAATTCGAATTAGAAAA GATTCACCAAGATCACCCAATACCTAATTTGAATTAGAAAA < 41bp 1 0.260599646843285 1 0.0529043674468994 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAK16 ENSG00000198042 CDS Human protein_coding chr8:33346620 chr8:33346629 stopgain 1.000 1 30 hPsi_associated_SNPs_1629 0 0 1 0 1 Cytosol 1 0.438863222317604 1 1 hPsi_site_8174 iPseU_CNN:1;iRNA_PseU:1 8175 chr1 116930826 116930826 1 + G T UCEC 116930810 + 116930790 116930830 41 TAACTGGTTGCTTCTCCTACTATCAAGAAGCTAAAAGTTCA TAACTGGTTGCTTCTCCTACTATCAAGAAGCTAAAATTTCA < 41bp 1 0.174032042334921 1 0.966561913490295 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116930810 chr1:116930826 nonsynonymous SNV 0.998 3 37 hPsi_associated_SNPs_1630 0 0 1 0 2 Nucleus 1 0.457751972290302 0.0668761730194101 1 hPsi_site_8175 iPseU_CNN:0.0668761730194101;iRNA_PseU:1 8176 chr20 47895664 47895664 1 + A G UCEC 47895670 + 47895650 47895690 41 GCCAGCGGGTACAGAATGGATTTTGGAAGAGGGAGTCACCA GCCAGCGGGTACAGGATGGATTTTGGAAGAGGGAGTCACCA < 41bp 1 0.534597278275852 1 1 experiment 0.930805443448295 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895670 chr20:47895664 . . 0 15 hPsi_associated_SNPs_1631 0 0 1 0 2 unknown 1 0.438718837391354 0 1 hPsi_site_8176 iPseU_CNN:0;iRNA_PseU:1 8177 chr1 28157369 28157369 1 + G A UCEC 28157373 + 28157353 28157393 41 GCAGCCGCGAACTCCGGCTCTAGCCTCCCGCTGTTCGACTG GCAGCCGCGAACTCCGACTCTAGCCTCCCGCTGTTCGACTG < 41bp 1 0.411621541520717 1 0.551798582077026 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28157373 chr1:28157369 nonsynonymous SNV 0.980 0 17 hPsi_associated_SNPs_1632 0 0 1 0 1 Ribosome 1 0.503130350123194 0.896402835845948 0.993739299753613 hPsi_site_8177 iPseU_CNN:0.896402835845948;iRNA_PseU:0.993739299753613 8178 chr6 32945273 32945273 1 + C T UCEC 32945258 + 32945238 32945278 41 ATTACCGGGATGCACAGGAGTTTGCTGCTGATGTACGGCTT ATTACCGGGATGCACAGGAGTTTGCTGCTGATGTATGGCTT < 41bp 1 0.20131087447649 1 0.994903087615967 experiment 1 Functional Loss NA| BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945258 chr6:32945273 nonsynonymous SNV 0.999 4 36 hPsi_associated_SNPs_1633 0 0 1 0 2 Cytosol 1 0.441361777877023 0.010193824768066 1 hPsi_site_8178 iPseU_CNN:0.010193824768066;iRNA_PseU:1 8179 chr5 170818360 170818360 1 + G A UCEC 170818349 + 170818329 170818369 41 AAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATT AAAGGATGAGTTGCACATTGTTGAAGCAGAGACAATGAATT < 41bp 1 0.616480658684622 1 0.989279687404633 experiment 0.767038682630755 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NPM1 ENSG00000181163 CDS Human protein_coding chr5:170818349 chr5:170818360 nonsynonymous SNV 1.000 0 32 hPsi_associated_SNPs_1635 0 0 1 0 2 Ribosome 1 0.867136374129052 0.021440625190734 0.265727251741895 hPsi_site_8179 iPseU_CNN:0.021440625190734;iRNA_PseU:0.265727251741895 8180 chr8 30624058 30624058 1 + G T UCEC 30624070 + 30624050 30624090 41 TAGGATTAGAAAAGGATTGCTTTCTATATATAATAATCTGT TAGGATTATAAAAGGATTGCTTTCTATATATAATAATCTGT < 41bp 1 0.282443950717435 1 0.00137031078338623 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30624070 chr8:30624058 . . 0 9 hPsi_associated_SNPs_1637 0 0 1 1 0 Endoplasmic reticulum 1 0.438718602361982 1 1 hPsi_site_8180 iPseU_CNN:1;iRNA_PseU:1 8181 chrX 84526344 84526344 1 + G T UCEC 84526363 + 84526343 84526383 41 AGCACCAATTCAAGTGACCTTAAGCGGCACATCATATCTGT ATCACCAATTCAAGTGACCTTAAGCGGCACATCATATCTGT < 41bp 1 0.621230101923012 1 0.904634356498718 experiment 0.757539796153976 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84526363 chrX:84526344 nonsynonymous SNV 0.998 4 2 hPsi_associated_SNPs_1639 0 0 1 0 0 cytosol 1 0.438615255515513 0.190731287002564 1 hPsi_site_8181 iPseU_CNN:0.190731287002564;iRNA_PseU:1 8182 chr5 118862848 118862848 1 + A G UCEC 118862835 + 118862815 118862855 41 TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTATATCCAG TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTGTATCCAG < 41bp 1 0.139166526317311 1 0.997756600379944 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118862835 chr5:118862848 synonymous SNV . 0 34 hPsi_associated_SNPs_1640 0 0 1 0 2 Cytosol 1 0.840107880200511 0.00448679924011208 0.319784239598978 hPsi_site_8182 iPseU_CNN:0.00448679924011208;iRNA_PseU:0.319784239598978 Blood protein levels 8183 chr5 126140515 126140515 1 + G A UCEC 126140512 + 126140492 126140532 41 TAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCAC TAATGGCGCCCAGATCAAGCTTCAAGAATATGAAGCAGCAC < 41bp 1 0.531885508697885 1 0.971026539802551 experiment 0.936228982604229 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126140512 chr5:126140515 nonsynonymous SNV 1.000 2 24 hPsi_associated_SNPs_1641 0 0 1 0 1 Ribosome 1 0.438706292016392 0.0579469203948979 1 hPsi_site_8183 iPseU_CNN:0.0579469203948979;iRNA_PseU:1 8184 chr1 92769576 92769576 1 + G T UCEC 92769587 + 92769567 92769607 41 GTCGTGGATGAACGTTCTATTGTCAAACTCTGTGGTTATCC GTCGTGGATTAACGTTCTATTGTCAAACTCTGTGGTTATCC < 41bp 1 0.14300306843875 1 0.999918818473816 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769587 chr1:92769576 stopgain 0.994 1 10 hPsi_associated_SNPs_1642 0 0 1 0 2 Cytosol 1 0.746613769097682 0.000162363052367942 0.506772461804636 hPsi_site_8184 iPseU_CNN:0.000162363052367942;iRNA_PseU:0.506772461804636 8185 chr13 46056552 46056552 1 + G A UCEC 46056557 + 46056537 46056577 41 TCGGTGAATAGTGACGGATTTATACCTATGCTGGCCAAGTT TCGGTGAATAGTGACAGATTTATACCTATGCTGGCCAAGTT < 41bp 1 0.427719222381809 1 0.996434926986694 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock COG3 ENSG00000136152 CDS Human protein_coding chr13:46056557 chr13:46056552 nonsynonymous SNV 0.997 3 16 hPsi_associated_SNPs_1643 0 0 0 1 2 Nucleus 1 0.44298192560514 0.00713014602661199 1 hPsi_site_8185 iPseU_CNN:0.00713014602661199;iRNA_PseU:1 8186 chr11 70049579 70049579 1 + T C UCEC 70049575 + 70049555 70049595 41 CAGACCCCGCCATGGACCCGTTCCTGGTGCTGCTGCACTCG CAGACCCCGCCATGGACCCGTTCCCGGTGCTGCTGCACTCG < 41bp 1 0.385279086520664 1 0.999651312828064 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FADD ENSG00000168040 CDS Human protein_coding chr11:70049575 chr11:70049579 nonsynonymous SNV 1.000 3 25 hPsi_associated_SNPs_1644 0 0 1 0 0 Ribosome 1 0.438718867799373 0.00069737434387207 1 hPsi_site_8186 iPseU_CNN:0.00069737434387207;iRNA_PseU:1 8187 chr2 239141914 239141914 1 + G A UCEC 239141906 + 239141886 239141926 41 AGGTTTCTCCTGTAATATTTTATCCCTGGACTTGTCAAGTG AGGTTTCTCCTGTAATATTTTATCCCTGAACTTGTCAAGTG < 41bp 1 0.366233907263246 1 0.990885138511658 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LOC643387 ENSG00000225057 ncRNA_intronic Human processed_transcript chr2:239141906 chr2:239141914 . . 0 29 hPsi_associated_SNPs_1645 0 0 0 0 0 unknown 1 0.440600447136841 0.0182297229766839 1 hPsi_site_8187 iPseU_CNN:0.0182297229766839;iRNA_PseU:1 8188 chr1 109440662 109440662 1 + G T UCEC 109440642 + 109440622 109440662 41 TCATGCCAAAGGGAAAAGTTTTGGTTGCCCTGGTCCCCAGG TCATGCCAAAGGGAAAAGTTTTGGTTGCCCTGGTCCCCAGT < 41bp 1 0.424432448476641 1 0.998828172683716 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109440642 chr1:109440662 nonsynonymous SNV 0.887 5 41 hPsi_associated_SNPs_1646 0 0 0 0 2 Endoplasmic reticulum 1 0.438716061650297 0.00234365463256792 1 hPsi_site_8188 iPseU_CNN:0.00234365463256792;iRNA_PseU:1 8189 chr2 27598786 27598786 1 + A T UCEC 27598782 + 27598762 27598802 41 AGGTGCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAG AGGTGCGCCTGGAACTGGCTTTTGTATACCTCATGAGCAAG < 41bp 1 0.486755394864611 1 0.999693751335144 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SNX17 ENSG00000115234 CDS Human protein_coding chr2:27598782 chr2:27598786 nonsynonymous SNV 1.000 4 25 hPsi_associated_SNPs_1647 0 0 0 2 2 Ribosome 1 0.906614113857706 0.000612497329711914 0.186771772284588 hPsi_site_8189 iPseU_CNN:0.000612497329711914;iRNA_PseU:0.186771772284588 not specified not specified 8190 chr16 29982835 29982835 1 + G A UCEC 29982849 + 29982829 29982869 41 CGCGCCGGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGG CGCGCCAGGAGTCCCACTGGTCTAGAACCCGGCTCTGAGGG < 41bp 1 0.36381382692199 1 0.999051332473755 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29982849 chr16:29982835 nonsynonymous SNV 0.854 0 7 hPsi_associated_SNPs_1648 0 0 1 0 1 Cytosol 1 0.438726842756123 0.00189733505249001 1 hPsi_site_8190 iPseU_CNN:0.00189733505249001;iRNA_PseU:1 8191 chr16 30779302 30779302 1 + G A UCEC 30779308 + 30779288 30779328 41 CCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGA CCAGCGATACAAGCAGAAGCTTCGAGAAGTACAAGCTGAGA < 41bp 1 0.427882467026722 1 0.999994158744812 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779308 chr16:30779302 nonsynonymous SNV 1.000 4 15 hPsi_associated_SNPs_1649 0 0 1 0 2 Ribosome 1 0.438693871696501 1.16825103759766e-05 1 hPsi_site_8191 iPseU_CNN:1.16825103759766e-05;iRNA_PseU:1 8192 chr10 93602108 93602108 1 + C T UCEC 93602098 + 93602078 93602118 41 GTTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG GTTGTCTTCTCCTGATAATGTAAATTGCCGTGATACCCAAG < 41bp 1 0.608381091484646 1 0.998250246047974 experiment 0.783237817030707 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93602098 chr10:93602108 synonymous SNV . 0 31 hPsi_associated_SNPs_1652 0 0 1 0 1 Ribosome 1 0.45127677164787 0.00349950790405207 1 hPsi_site_8192 iPseU_CNN:0.00349950790405207;iRNA_PseU:1 8193 chr14 68040990 68040990 1 + C T UCEC 68040983 + 68040963 68041003 41 TCTCTGAGAAGAAAACCTACTACCTGACGGCCGATTCACCC TCTCTGAGAAGAAAACCTACTACCTGATGGCCGATTCACCC < 41bp 1 0.440422887593392 1 0.999583840370178 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68040983 chr14:68040990 nonsynonymous SNV 0.345 0 28 hPsi_associated_SNPs_1653 0 0 1 0 1 Endoplasmic reticulum 1 0.439198097449337 0.000832319259643999 1 hPsi_site_8193 iPseU_CNN:0.000832319259643999;iRNA_PseU:1 8194 chr20 62373763 62373763 1 + C T UCEC 62373766 + 62373746 62373786 41 GGATGTTGGTGTGGACACGCTGACCGACGGGCTGTCCAGCC GGATGTTGGTGTGGACATGCTGACCGACGGGCTGTCCAGCC < 41bp 1 0.210700173170693 1 0.309872329235077 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373766 chr20:62373763 nonsynonymous SNV 0.006 1 18 hPsi_associated_SNPs_1657 0 0 1 0 1 Cytosol 1 0.906706035277708 1 0.186587929444584 hPsi_site_8194 iPseU_CNN:1;iRNA_PseU:0.186587929444584 8195 chr16 88923581 88923581 1 + T G UCEC 88923566 + 88923546 88923586 41 CGAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGATTGCCA CGAGCCTCCCAAGATGGCGGTGTGCATCGCGGTGAGTGCCA < 41bp 1 0.553228345589915 1 0.995919048786163 experiment 0.89354330882017 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88923566 chr16:88923581 nonsynonymous SNV 0.996 3 36 hPsi_associated_SNPs_1659 0 0 1 0 1 Ribosome 1 0.437144844693011 0.00816190242767401 1 hPsi_site_8195 iPseU_CNN:0.00816190242767401;iRNA_PseU:1 8196 chr1 40205905 40205905 1 + G A UCEC 40205909 + 40205889 40205929 41 TTTTGGAGACATCACAGATATTCAGATTCCTCTGGATTATG TTTTGGAGACATCACAAATATTCAGATTCCTCTGGATTATG < 41bp 1 0.446875090872297 1 0.992228925228119 experiment 1 Functional Loss NA| PPIE ENSG00000084072 CDS Human protein_coding chr1:40205909 chr1:40205905 nonsynonymous SNV 1.000 3 17 hPsi_associated_SNPs_1660 0 0 1 0 2 Ribosome 1 0.438719877287433 0.015542149543762 1 hPsi_site_8196 iPseU_CNN:0.015542149543762;iRNA_PseU:1 8197 chr6 111213565 111213565 1 + A C UCEC 111213568 + 111213548 111213588 41 CCAGATCAAACCTTGGAAATTCTGATGAGTGAGCTTGACCC CCAGATCAAACCTTGGACATTCTGATGAGTGAGCTTGACCC < 41bp 1 0.0592323090320344 1 0.996601045131683 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide AMD1 ENSG00000123505 CDS Human protein_coding chr6:111213568 chr6:111213565 nonsynonymous SNV 0.997 3 18 hPsi_associated_SNPs_1661 0 0 1 0 2 Cytosol 1 0.438727635641652 0.00679790973663397 1 hPsi_site_8197 iPseU_CNN:0.00679790973663397;iRNA_PseU:1 8198 chr14 77929016 77929016 1 + A G UCEC 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGGCAC < 41bp 1 0.215115392946694 1 0.980179727077484 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929016 nonsynonymous SNV 1.000 1 38 hPsi_associated_SNPs_1662 0 0 1 0 2 Ribosome 1 0.872754991234234 0.039640545845032 0.254490017531533 hPsi_site_8198 iPseU_CNN:0.039640545845032;iRNA_PseU:0.254490017531533 8199 chrX 100646487 100646487 1 + G A UCEC 100646506 + 100646486 100646526 41 TGTGGCAAGCACCAACCCCATAAAGTGACACAGTACAAGAA TATGGCAAGCACCAACCCCATAAAGTGACACAGTACAAGAA < 41bp 1 0.484810098609144 1 0.00094875693321228 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646506 chrX:100646487 nonsynonymous SNV 1.000 1 2 hPsi_associated_SNPs_1663 0 0 1 0 1 unknown 1 0.533946540269778 1 0.932106919460443 hPsi_site_8199 iPseU_CNN:1;iRNA_PseU:0.932106919460443 8200 chr1 112247073 112247073 1 + G T UCEC 112247061 + 112247041 112247081 41 TAGCAAGACAGTGGTGTAACTGTGCCTTTTTAGAATCTTCT TAGCAAGACAGTGGTGTAACTGTGCCTTTTTATAATCTTCT < 41bp 1 0.102915619990552 1 0.228540033102036 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RAP1A ENSG00000116473 CDS Human protein_coding chr1:112247061 chr1:112247073 stopgain 1.000 1 33 hPsi_associated_SNPs_1664 0 0 1 0 1 Cytosol 1 0.455803904786902 1 1 hPsi_site_8200 iPseU_CNN:1;iRNA_PseU:1 8201 chr1 82302673 82302673 1 + G A UCEC 82302656 + 82302636 82302676 41 AGGAATACAAAGAAAATACTTAAAGGGATCAATAATGGTGT AGGAATACAAAGAAAATACTTAAAGGGATCAATAATGATGT < 41bp 1 0.480365128698198 1 0.999944567680359 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82302656 chr1:82302673 nonsynonymous SNV 1.000 3 38 hPsi_associated_SNPs_1665 0 0 1 0 1 cytosol 1 0.942292605185428 0.000110864639282005 0.115414789629143 hPsi_site_8201 iPseU_CNN:0.000110864639282005;iRNA_PseU:0.115414789629143 8202 chr1 6692995 6692995 1 + T C UCEC 6692975 + 6692955 6692995 41 TATGCCCTTTTGGACTTAGATTCCCTGAAGAAAAAACTCTT TATGCCCTTTTGGACTTAGATTCCCTGAAGAAAAAACTCTC < 41bp 1 0.38589899980167 1 0.934686183929443 experiment 1 Functional Loss NA| THAP3 ENSG00000041988 CDS Human protein_coding chr1:6692975 chr1:6692995 nonsynonymous SNV 0.998 1 41 hPsi_associated_SNPs_1666 0 0 1 0 0 Ribosome 1 0.438718578290499 0.130627632141114 1 hPsi_site_8202 iPseU_CNN:0.130627632141114;iRNA_PseU:1 8203 chr15 22990164 22990164 1 + G T UCEC 22990155 + 22990135 22990175 41 CGGCTTCTCGGCTACCAGGGTATCGCCGTGGTCATGGAGGA CGGCTTCTCGGCTACCAGGGTATCGCCGTTGTCATGGAGGA < 41bp 1 0.549683612591203 1 0.999291181564331 experiment 0.900632774817594 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22990155 chr15:22990164 synonymous SNV . 0 30 hPsi_associated_SNPs_1667 0 0 1 0 1 Cytosol 1 0.438718323017683 0.00141763687133789 1 hPsi_site_8203 iPseU_CNN:0.00141763687133789;iRNA_PseU:1 8204 chr1 25683288 25683288 1 + A G UCEC 25683293 + 25683273 25683313 41 TATTTTTACAGAAAAAGACATAGTATACCCTGGAATTGCTG TATTTTTACAGAAAAGGACATAGTATACCCTGGAATTGCTG < 41bp 1 0.253297411626466 1 0.0002632737159729 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25683293 chr1:25683288 synonymous SNV . 0 16 hPsi_associated_SNPs_1668 0 0 1 0 2 Ribosome 1 0.461275483320698 1 1 hPsi_site_8204 iPseU_CNN:1;iRNA_PseU:1 8205 chr11 8705588 8705588 1 + G A UCEC 8705584 + 8705564 8705604 41 AAGCACCCCGGCGGCCGCGGTAATGCTGGTGGTCTGCATCA AAGCACCCCGGCGGCCGCGGTAATACTGGTGGTCTGCATCA < 41bp 1 0.518609176677092 1 0.974372208118439 experiment 0.962781646645816 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL27A ENSG00000166441 CDS Human protein_coding chr11:8705584 chr11:8705588 nonsynonymous SNV 1.000 3 25 hPsi_associated_SNPs_1669 0 0 1 0 2 Cytosol 1 0.440936950356093 0.0512555837631219 1 hPsi_site_8205 iPseU_CNN:0.0512555837631219;iRNA_PseU:1 8206 chr13 45957263 45957263 1 + T C UCEC 45957252 + 45957232 45957272 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTG GTAGATTGCAAATGACCTGCTTTCTTTCTGTCCCCGGGCTG < 41bp 1 0.625348346560152 1 0.965234041213989 experiment 0.749303306879697 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45957252 chr13:45957263 . . 0 32 hPsi_associated_SNPs_1670 0 0 0 0 1 unknown 1 0.446485389607431 0.0695319175720219 1 hPsi_site_8206 iPseU_CNN:0.0695319175720219;iRNA_PseU:1 8207 chr3 33883505 33883505 1 + T C UCEC 33883514 + 33883494 33883534 41 CATCCAGACTGTTGATCAGTTGATTAAAGAACTGCCTGAAT CATCCAGACTGCTGATCAGTTGATTAAAGAACTGCCTGAAT < 41bp 1 0.138837529711227 1 0.988807916641235 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33883514 chr3:33883505 nonsynonymous SNV 1.000 1 12 hPsi_associated_SNPs_1671 0 0 1 0 1 Nucleus 1 0.574779415072352 0.02238416671753 0.850441169855297 hPsi_site_8207 iPseU_CNN:0.02238416671753;iRNA_PseU:0.850441169855297 8208 chr5 74009438 74009438 1 + G A UCEC 74009441 + 74009421 74009461 41 GAATTTGATACCCCTGGGCATACACTATCTTGGGGAAAAGG GAATTTGATACCCCTGGACATACACTATCTTGGGGAAAAGG < 41bp 1 0.418160388091434 1 0.391855388879776 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:74009441 chr5:74009438 synonymous SNV . 0 18 hPsi_associated_SNPs_1672 0 0 1 0 1 Cytosol 1 0.438718599810803 1 1 hPsi_site_8208 iPseU_CNN:1;iRNA_PseU:1 8209 chr11 64878206 64878206 1 + C A UCEC 64878220 + 64878200 64878240 41 CAGAAGCTATTCTCTGAACGTATTGATGTGTTCAGCCCTGT CAGAAGATATTCTCTGAACGTATTGATGTGTTCAGCCCTGT < 41bp 1 0.424004039859207 1 0.999989748001099 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VPS51 ENSG00000149823 CDS Human protein_coding chr11:64878220 chr11:64878206 nonsynonymous SNV 0.997 4 7 hPsi_associated_SNPs_1673 0 0 1 0 2 Ribosome 1 0.442482306965094 2.05039978020682e-05 1 hPsi_site_8209 iPseU_CNN:2.05039978020682e-05;iRNA_PseU:1 8210 chr11 126143287 126143287 1 + C T UCEC 126143274 + 126143254 126143294 41 TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGCTACCTCT TCCTCCCCTGGACCTCCGGTTCAACCCCTCGGGTTACCTCT < 41bp 1 0.350337243419 1 0.998505711555481 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143274 chr11:126143287 synonymous SNV . 0 34 hPsi_associated_SNPs_1674 0 0 1 9 3 Ribosome 1 0.566352522651567 0.00298857688903809 0.867294954696866 hPsi_site_8210 iPseU_CNN:0.00298857688903809;iRNA_PseU:0.867294954696866 8211 chr19 9271677 9271677 1 + G A UCEC 9271696 + 9271676 9271716 41 GGAAAGCTTTCAGCGCGAGTTCAAACCTCACCGCACACAGG GAAAAGCTTTCAGCGCGAGTTCAAACCTCACCGCACACAGG < 41bp 1 0.498033955728438 1 0.83871328830719 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271696 chr19:9271677 synonymous SNV . 0 2 hPsi_associated_SNPs_1675 0 0 1 0 0 Nucleus 1 0.617924593702558 0.32257342338562 0.764150812594884 hPsi_site_8211 iPseU_CNN:0.32257342338562;iRNA_PseU:0.764150812594884 8212 chr4 25419320 25419320 1 + C T UCEC 25419310 + 25419290 25419330 41 CACTGGAGATTACTGGAAAGTATGAAAGCACAGTATGTTGC CACTGGAGATTACTGGAAAGTATGAAAGCATAGTATGTTGC < 41bp 1 0.414264420932241 1 0.998051285743713 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25419310 chr4:25419320 stopgain 0.998 1 31 hPsi_associated_SNPs_1676 0 0 1 0 2 chromatin 1 0.873834013612855 0.00389742851257391 0.252331972774291 hPsi_site_8212 iPseU_CNN:0.00389742851257391;iRNA_PseU:0.252331972774291 8213 chrX 154282929 154282929 1 + G A UCEC 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGGATTTTTCGGAGGCTTTCTACTTGGCATGGCATCC < 41bp 1 0.451047679885334 1 0.979892253875732 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282929 synonymous SNV . 0 26 hPsi_associated_SNPs_1677 0 0 1 0 1 Ribosome 1 0.506053846552556 0.040215492248536 0.987892306894887 hPsi_site_8213 iPseU_CNN:0.040215492248536;iRNA_PseU:0.987892306894887 not specified not specified 8214 chr17 7319289 7319289 1 + G A UCEC 7319308 + 7319288 7319328 41 CGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG CACACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG < 41bp 1 0.426382153824191 1 0.998957633972168 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7319308 chr17:7319289 synonymous SNV . 0 2 hPsi_associated_SNPs_1678 0 0 0 0 0 chromatin 1 0.448905582565309 0.00208473205566406 1 hPsi_site_8214 iPseU_CNN:0.00208473205566406;iRNA_PseU:1 8215 chr1 36752681 36752681 1 + G A UCEC 36752689 + 36752669 36752709 41 ACATCCCAGATGGGCTCAACTCTGCCGAGTGGTGCCGGGTA ACATCCCAGATGAGCTCAACTCTGCCGAGTGGTGCCGGGTA < 41bp 1 0.156850125559478 1 0.973749160766602 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752689 chr1:36752681 nonsynonymous SNV 0.990 0 13 hPsi_associated_SNPs_1679 0 0 1 0 0 Nucleus 1 0.438106058698786 0.052501678466796 1 hPsi_site_8215 iPseU_CNN:0.052501678466796;iRNA_PseU:1 8216 chr1 156704151 156704151 1 + A G UCEC 156704150 + 156704130 156704170 41 GGAGGAATATGCTGAGCGGCTACAGAAAGCTGGCCCTGGCC GGAGGAATATGCTGAGCGGCTGCAGAAAGCTGGCCCTGGCC < 41bp 1 0.286146881935502 1 0.99848461151123 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156704150 chr1:156704151 synonymous SNV . 0 22 hPsi_associated_SNPs_1680 0 0 0 0 0 chromatin 1 0.447695708008729 0.00303077697753995 1 hPsi_site_8216 iPseU_CNN:0.00303077697753995;iRNA_PseU:1 8217 chr12 113629342 113629342 1 + C T UCEC 113629360 + 113629340 113629380 41 AGCGGCAGACTCCCAGAAGTTATCTATGGGTGGGTTACACT AGTGGCAGACTCCCAGAAGTTATCTATGGGTGGGTTACACT < 41bp 1 0.657009725820017 1 0.985192894935608 experiment 0.685980548359965 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629360 chr12:113629342 nonsynonymous SNV 0.000 0 3 hPsi_associated_SNPs_1681 0 0 0 0 0 Ribosome 1 0.455001949516697 0.029614210128784 1 hPsi_site_8217 iPseU_CNN:0.029614210128784;iRNA_PseU:1 8218 chr11 71943353 71943353 1 + T A UCEC 71943358 + 71943338 71943378 41 TTGTGAATTGTCACCTCACCTCGGGAAATGAGAAGACGGCT TTGTGAATTGTCACCACACCTCGGGAAATGAGAAGACGGCT < 41bp 1 0.0349346238735007 1 0.900215685367584 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71943358 chr11:71943353 nonsynonymous SNV 0.888 5 16 hPsi_associated_SNPs_1682 0 0 1 0 2 Cytosol 1 0.837992513129378 0.199568629264832 0.324014973741244 hPsi_site_8218 iPseU_CNN:0.199568629264832;iRNA_PseU:0.324014973741244 8219 chr6 24503568 24503568 1 + C T UCEC 24503574 + 24503554 24503594 41 TCTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACAC TCTGAGGAAGCCCGTCGTGTTTACGGAGACATTATCCACAC < 41bp 1 0.558554327616386 1 0.999844193458557 experiment 0.882891344767229 Functional Loss NA| ALDH5A1 ENSG00000112294 CDS Human protein_coding chr6:24503574 chr6:24503568 synonymous SNV . 0 15 hPsi_associated_SNPs_1683 0 0 1 0 2 Nucleus 1 0.439388904178095 0.000311613082885964 1 hPsi_site_8219 iPseU_CNN:0.000311613082885964;iRNA_PseU:1 8220 chr2 220366626 220366626 1 + G A UCEC 220366621 + 220366601 220366641 41 ACAGGGGGTGGTCTTTACCATTTTCGAGACCAGATCCTGGC ACAGGGGGTGGTCTTTACCATTTTCAAGACCAGATCCTGGC < 41bp 1 0.683325960208134 1 0.984303951263428 experiment 0.633348079583733 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366621 chr2:220366626 nonsynonymous SNV 0.995 4 26 hPsi_associated_SNPs_1684 0 0 1 0 1 Ribosome 1 0.438696963824291 0.0313920974731441 1 hPsi_site_8220 iPseU_CNN:0.0313920974731441;iRNA_PseU:1 8221 chr3 47888096 47888096 1 + C T UCEC 47888104 + 47888084 47888124 41 GGCCCCTCCCTGCGCCGGAATGTGGGCTTCCAGGTGCGGTT GGCCCCTCCCTGTGCCGGAATGTGGGCTTCCAGGTGCGGTT < 41bp 1 0.329802250805391 1 0.429783850908279 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47888104 chr3:47888096 nonsynonymous SNV 0.992 4 13 hPsi_associated_SNPs_1685 0 0 1 0 0 Cytosol 1 0.438764837426645 1 1 hPsi_site_8221 iPseU_CNN:1;iRNA_PseU:1 8222 chr2 228221825 228221825 1 + C T UCEC 228221822 + 228221802 228221842 41 TGCTTAATAGCTGGCTCTGGTTTCGCCGCTAGAGGTAACAT TGCTTAATAGCTGGCTCTGGTTTTGCCGCTAGAGGTAACAT < 41bp 1 0.392049792114359 1 0.974605202674866 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFF ENSG00000168958 CDS Human protein_coding chr2:228221822 chr2:228221825 nonsynonymous SNV 0.999 2 24 hPsi_associated_SNPs_1688 0 0 1 0 0 Cytosol 1 0.438719075869601 0.0507895946502681 1 hPsi_site_8222 iPseU_CNN:0.0507895946502681;iRNA_PseU:1 8223 chr17 38140613 38140613 1 + G A UCEC 38140603 + 38140583 38140623 41 TTTCAGGCAAGGAGCCGAGATTCGTGCTGCGGGCCCTGCGG TTTCAGGCAAGGAGCCGAGATTCGTGCTGCAGGCCCTGCGG < 41bp 1 0.391473458854037 1 0.647973537445068 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38140603 chr17:38140613 nonsynonymous SNV 1.000 5 31 hPsi_associated_SNPs_1689 0 0 1 0 2 Ribosome 1 0.440517389419372 0.704052925109864 1 hPsi_site_8223 iPseU_CNN:0.704052925109864;iRNA_PseU:1 8224 chr20 34130636 34130636 1 + A G UCEC 34130617 + 34130597 34130637 41 GCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAA GCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCGA < 41bp 1 0.186952987782734 1 0.998886466026306 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34130617 chr20:34130636 nonsynonymous SNV 0.993 4 40 hPsi_associated_SNPs_1690 0 0 1 0 2 Ribosome 1 0.43872809575253 0.00222706794738792 1 hPsi_site_8224 iPseU_CNN:0.00222706794738792;iRNA_PseU:1 Multiple complex diseases 8225 chr11 70266550 70266550 1 + A G UCEC 70266533 + 70266513 70266553 41 GAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGAC GAAAGGGTTTGGAGGAAAATTTGGTGTGCAGACAGACGGAC < 41bp 1 0.406522758017643 1 0.902265191078186 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock CTTN ENSG00000085733 CDS Human protein_coding chr11:70266533 chr11:70266550 nonsynonymous SNV 1.000 4 38 hPsi_associated_SNPs_1691 0 0 1 0 1 Ribosome 1 0.438789166421837 0.195469617843628 1 hPsi_site_8225 iPseU_CNN:0.195469617843628;iRNA_PseU:1 8226 chr3 142747415 142747415 1 + C T UCEC 142747417 + 142747397 142747437 41 CCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGA CCATTAAATCCGTACTTGTATGGAATGTCAGAAGAGCAAGA < 41bp 1 0.256046404893668 1 0.132696986198425 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide U2SURP ENSG00000163714 CDS Human protein_coding chr3:142747417 chr3:142747415 nonsynonymous SNV 1.000 1 19 hPsi_associated_SNPs_1692 0 0 1 0 1 Cytosol 1 0.445552093404934 1 1 hPsi_site_8226 iPseU_CNN:1;iRNA_PseU:1 8227 chr7 111935975 111935975 1 + T G UCEC 111935973 + 111935953 111935993 41 CTGAACAGCCCATCACAGATTTTTGTAGTGTAATAAGAATT CTGAACAGCCCATCACAGATTTGTGTAGTGTAATAAGAATT < 41bp 1 0.330964484304918 1 0.959167659282684 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111935973 chr7:111935975 nonsynonymous SNV 0.994 3 23 hPsi_associated_SNPs_1694 0 0 1 0 2 chromatin 1 0.526968288866921 0.081664681434632 0.946063422266159 hPsi_site_8227 iPseU_CNN:0.081664681434632;iRNA_PseU:0.946063422266159 8228 chr9 88622345 88622345 1 + C T UCEC 88622343 + 88622323 88622363 41 AGACATGGTGAAAGATGCACTTCGGTCTTTTGTCAGTCCTC AGACATGGTGAAAGATGCACTTTGGTCTTTTGTCAGTCCTC < 41bp 1 0.678393706994176 1 0.965686917304993 experiment 0.643212586011648 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NAA35 ENSG00000135040 CDS Human protein_coding chr9:88622343 chr9:88622345 nonsynonymous SNV 1.000 4 23 hPsi_associated_SNPs_1695 0 0 0 0 2 Cytosol 1 0.438718668179983 0.068626165390014 1 hPsi_site_8228 iPseU_CNN:0.068626165390014;iRNA_PseU:1 8229 chr2 233431860 233431860 1 + C T UCEC 233431858 + 233431838 233431878 41 AGCCCGAATCCGGGACACACTTCGGCGAGTGCTTAACCTAC AGCCCGAATCCGGGACACACTTTGGCGAGTGCTTAACCTAC < 41bp 1 0.601376764405831 1 5.63263893127441e-05 experiment 0.797246471188338 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233431858 chr2:233431860 nonsynonymous SNV 0.998 2 23 hPsi_associated_SNPs_1696 0 0 1 0 2 Ribosome 1 0.438718692549723 1 1 hPsi_site_8229 iPseU_CNN:1;iRNA_PseU:1 8230 chr6 47576928 47576928 1 + G T UCEC 47576913 + 47576893 47576933 41 CTAAAGCAAATACAACTGCTTTCCTGACTCCATTAGAAATC CTAAAGCAAATACAACTGCTTTCCTGACTCCATTATAAATC < 41bp 1 0.56934730636422 1 0.975220918655396 experiment 0.86130538727156 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576913 chr6:47576928 stopgain 0.998 0 36 hPsi_associated_SNPs_1697 0 0 1 0 1 Cytosol 1 0.438718606529889 0.0495581626892081 1 hPsi_site_8230 iPseU_CNN:0.0495581626892081;iRNA_PseU:1 8231 chr3 169802659 169802659 1 + A G UCEC 169802677 + 169802657 169802697 41 TAATTTAAAAGACATTGGATTACCTTTGGATCCATTTGTCA TAGTTTAAAAGACATTGGATTACCTTTGGATCCATTTGTCA < 41bp 1 0.585650263775356 1 0.999144554138184 experiment 0.828699472449288 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GPR160 ENSG00000173890 CDS Human protein_coding chr3:169802677 chr3:169802659 nonsynonymous SNV 0.675 0 3 hPsi_associated_SNPs_1698 0 0 1 0 0 Cytosol 1 0.890565250068984 0.00171089172363192 0.218869499862033 hPsi_site_8231 iPseU_CNN:0.00171089172363192;iRNA_PseU:0.218869499862033 8232 chr20 13789531 13789531 1 + T C UCEC 13789530 + 13789510 13789550 41 ACTATCCTGGAATGTTTGAATTGATGGAAGATTTACAAGGT ACTATCCTGGAATGTTTGAATCGATGGAAGATTTACAAGGT < 41bp 1 0.186155138499357 1 0.97864043712616 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13789530 chr20:13789531 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_1699 0 0 1 0 2 Ribosome 1 0.443381737309668 0.04271912574768 1 hPsi_site_8232 iPseU_CNN:0.04271912574768;iRNA_PseU:1 8233 chr3 136012676 136012676 1 + G A UCEC 136012659 + 136012639 136012679 41 GTCTGTCACCAATGAGGATGTTACCCAGGAGGAGCTCGGTG GTCTGTCACCAATGAGGATGTTACCCAGGAGGAGCTCAGTG < 41bp 1 0.455757409560061 1 0.992531657218933 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136012659 chr3:136012676 nonsynonymous SNV 0.995 5 38 hPsi_associated_SNPs_1700 0 0 1 0 2 Ribosome 1 0.438718592995364 0.014936685562134 1 hPsi_site_8233 iPseU_CNN:0.014936685562134;iRNA_PseU:1 8234 chr19 46198856 46198856 1 + G A UCEC 46198863 + 46198843 46198883 41 GCCATTATGACTCGAAGCTCTTCCCACCCGGATCGACCCCC GCCATTATGACTCAAAGCTCTTCCCACCCGGATCGACCCCC < 41bp 1 0.699424956474091 1 0.0379227101802826 experiment 0.601150087051817 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198863 chr19:46198856 synonymous SNV . 0 14 hPsi_associated_SNPs_1701 0 0 1 0 0 chromatin 1 0.44123657580921 1 1 hPsi_site_8234 iPseU_CNN:1;iRNA_PseU:1 8235 chr2 132276186 132276186 1 + A G UCEC 132276198 + 132276178 132276218 41 CAGCGGTCACTGATGCCTCCTTCAAGGTGAAGAGCCACGTC CAGCGGTCGCTGATGCCTCCTTCAAGGTGAAGAGCCACGTC < 41bp 1 0.497249226374945 1 0.999824404716492 experiment 1 Functional Loss NA| LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132276198 chr2:132276186 . . 0 9 hPsi_associated_SNPs_1702 0 0 0 0 1 unknown 1 0.477265794994434 0.000351190567015935 1 hPsi_site_8235 iPseU_CNN:0.000351190567015935;iRNA_PseU:1 8236 chr18 77894549 77894549 1 + T C UCEC 77894552 + 77894532 77894572 41 ACCTGTTGGGCCTGGTGTTCTTCCTGTGAGCCCCTCTGTCA ACCTGTTGGGCCTGGTGCTCTTCCTGTGAGCCCCTCTGTCA < 41bp 1 0.35986205163197 1 0.98612117767334 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894552 chr18:77894549 nonsynonymous SNV 0.233 0 18 hPsi_associated_SNPs_1703 0 0 1 0 0 Cytosol 1 0.80046795064897 0.0277576446533201 0.39906409870206 hPsi_site_8236 iPseU_CNN:0.0277576446533201;iRNA_PseU:0.39906409870206 8237 chr6 348905 348905 1 + C T UCEC 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCGGTGGAGCAGTTTTCTGGCACTGGCTCCGCTG < 41bp 1 0.645584709975721 1 0.999965786933899 experiment 0.708830580048559 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348905 nonsynonymous SNV 0.001 0 25 hPsi_associated_SNPs_1704 0 0 1 0 0 Ribosome 1 0.438718555126478 6.84261322019264e-05 1 hPsi_site_8237 iPseU_CNN:6.84261322019264e-05;iRNA_PseU:1 8238 chr2 109086502 109086502 1 + A C UCEC 109086516 + 109086496 109086536 41 GCAGGAAGAGCTTTTACAGTTGAAAGCTATACACCAAGAAG GCAGGACGAGCTTTTACAGTTGAAAGCTATACACCAAGAAG < 41bp 1 0.345112488205057 1 0.999833703041077 experiment 1 Functional Loss NA| GCC2 ENSG00000135968 CDS Human protein_coding chr2:109086516 chr2:109086502 nonsynonymous SNV 0.655 0 7 hPsi_associated_SNPs_1705 0 0 1 0 0 chromatin 1 0.447603578618244 0.000332593917846014 1 hPsi_site_8238 iPseU_CNN:0.000332593917846014;iRNA_PseU:1 8239 chr16 105817 105817 1 + G T UCEC 105833 + 105813 105853 41 TGAAGAAGGCCATCCAGAGATACGTGCAGCTCAAGCAGGAG TGAATAAGGCCATCCAGAGATACGTGCAGCTCAAGCAGGAG < 41bp 1 0.666575292267167 1 0.998741626739502 experiment 0.666849415465666 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:105833 chr16:105817 nonsynonymous SNV 1.000 4 5 hPsi_associated_SNPs_1707 0 0 1 0 2 Ribosome 1 0.435189613283556 0.00251674652099609 1 hPsi_site_8239 iPseU_CNN:0.00251674652099609;iRNA_PseU:1 8240 chr2 171818188 171818188 1 + C T UCEC 171818194 + 171818174 171818214 41 TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGT TGTACCAACAGTACTGTTATTGCCACCACAAGTAAACCAGT < 41bp 1 0.0822515814759863 1 0.999888241291046 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818194 chr2:171818188 nonsynonymous SNV 0.995 4 15 hPsi_associated_SNPs_1709 0 0 1 0 2 Ribosome 1 0.438820721853687 0.000223517417907937 1 hPsi_site_8240 iPseU_CNN:0.000223517417907937;iRNA_PseU:1 8241 chr11 111414714 111414714 1 + C A UCEC 111414729 + 111414709 111414749 41 TACTTCTCGAAGACTGAACTTTGAGGAAGCCAAAGAAGCCT TACTTATCGAAGACTGAACTTTGAGGAAGCCAAAGAAGCCT < 41bp 1 0.503011112294896 1 0.96332859992981 experiment 0.993977775410207 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LAYN ENSG00000204381 CDS Human protein_coding chr11:111414729 chr11:111414714 nonsynonymous SNV 0.938 0 6 hPsi_associated_SNPs_1712 0 0 1 0 1 exosome 1 0.439000403168875 0.07334280014038 1 hPsi_site_8241 iPseU_CNN:0.07334280014038;iRNA_PseU:1 8242 chr15 59407065 59407065 1 + G A UCEC 59407056 + 59407036 59407076 41 TCTGTACATGTGCGTTGGCATTATGGATCGATTTTTACAGG TCTGTACATGTGCGTTGGCATTATGGATCAATTTTTACAGG < 41bp 1 0.507636826776779 1 0.996747255325317 experiment 0.984726346446441 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59407056 chr15:59407065 nonsynonymous SNV 0.977 4 30 hPsi_associated_SNPs_1714 0 0 1 0 1 Ribosome 1 0.438660259376068 0.0065054893493659 1 hPsi_site_8242 iPseU_CNN:0.0065054893493659;iRNA_PseU:1 8243 chr5 162900416 162900416 1 + C T UCEC 162900423 + 162900403 162900443 41 GGAAAAATACAAGCTAGATATTGCCCAGTTAGAAGAAAATT GGAAAAATACAAGTTAGATATTGCCCAGTTAGAAGAAAATT < 41bp 1 0.268479916101046 1 0.642911553382874 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock HMMR ENSG00000072571 CDS Human protein_coding chr5:162900423 chr5:162900416 synonymous SNV . 0 14 hPsi_associated_SNPs_1715 0 0 1 0 1 Cytosol 1 0.511135526205781 0.714176893234252 0.977728947588438 hPsi_site_8243 iPseU_CNN:0.714176893234252;iRNA_PseU:0.977728947588438 8244 chrX 51640956 51640956 1 + C T UCEC 51640940 + 51640920 51640960 41 CAAAGAAGAACACCTGTATATTCTCATCAGTACCCCCGAGT CAAAGAAGAACACCTGTATATTCTCATCAGTACCCCTGAGT < 41bp 1 0.544271275705871 1 0.999826192855835 experiment 0.911457448588259 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640940 chrX:51640956 synonymous SNV . 0 37 hPsi_associated_SNPs_1716 0 0 1 0 2 chromatin 1 0.438718716470818 0.000347614288330078 1 hPsi_site_8244 iPseU_CNN:0.000347614288330078;iRNA_PseU:1 8245 chr6 31937330 31937330 1 + G T UCEC 31937314 + 31937294 31937334 41 CTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCC CTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGATGGCC < 41bp 1 0.319962643157667 1 0.931977391242981 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31937314 chr6:31937330 nonsynonymous SNV 0.930 4 37 hPsi_associated_SNPs_1717 0 0 1 0 1 chromatin 1 0.438718599401964 0.136045217514038 1 hPsi_site_8245 iPseU_CNN:0.136045217514038;iRNA_PseU:1 8246 chr4 25419317 25419317 1 + G T UCEC 25419310 + 25419290 25419330 41 CACTGGAGATTACTGGAAAGTATGAAAGCACAGTATGTTGC CACTGGAGATTACTGGAAAGTATGAAATCACAGTATGTTGC < 41bp 1 0.499126793535739 1 0.961864948272705 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25419310 chr4:25419317 nonsynonymous SNV 1.000 4 28 hPsi_associated_SNPs_1718 0 0 1 0 2 chromatin 1 0.441068020550199 0.0762701034545901 1 hPsi_site_8246 iPseU_CNN:0.0762701034545901;iRNA_PseU:1 8247 chr7 111935970 111935970 1 + G A UCEC 111935973 + 111935953 111935993 41 CTGAACAGCCCATCACAGATTTTTGTAGTGTAATAAGAATT CTGAACAGCCCATCACAAATTTTTGTAGTGTAATAAGAATT < 41bp 1 0.265716026001814 1 0.983543694019318 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111935973 chr7:111935970 nonsynonymous SNV 0.997 2 18 hPsi_associated_SNPs_1722 0 0 1 0 2 chromatin 1 0.463531027924166 0.0329126119613641 1 hPsi_site_8247 iPseU_CNN:0.0329126119613641;iRNA_PseU:1 8248 chr20 44045191 44045191 1 + G A UCEC 44045209 + 44045189 44045229 41 GGGCAGCTGATCTCCAAGTATTCTCTACGGGAGCTGCACCT GGACAGCTGATCTCCAAGTATTCTCTACGGGAGCTGCACCT < 41bp 1 0.422918397092023 1 0.999829053878784 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045209 chr20:44045191 synonymous SNV . 0 3 hPsi_associated_SNPs_1723 0 0 1 1 0 Ribosome 1 0.719856043539712 0.000341892242432085 0.560287912920575 hPsi_site_8248 iPseU_CNN:0.000341892242432085;iRNA_PseU:0.560287912920575 8249 chr19 16338427 16338427 1 + G A UCEC 16338424 + 16338404 16338444 41 AGTGTGTGCGGCTATCACGCTTCGAGAATGACCGCACCATC AGTGTGTGCGGCTATCACGCTTCAAGAATGACCGCACCATC < 41bp 1 0.460284788735333 1 0.997980415821075 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338424 chr19:16338427 nonsynonymous SNV 0.988 3 24 hPsi_associated_SNPs_1724 0 0 1 0 2 Ribosome 1 0.439080345960631 0.00403916835785001 1 hPsi_site_8249 iPseU_CNN:0.00403916835785001;iRNA_PseU:1 8250 chr12 123467037 123467037 1 + G A UCEC 123467054 + 123467034 123467074 41 CGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG CGAAGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG < 41bp 1 0.304625894186514 1 0.994421124458313 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123467054 chr12:123467037 synonymous SNV . 0 4 hPsi_associated_SNPs_1725 0 0 1 0 2 Cytosol 1 0.50578531844612 0.011157751083374 0.988429363107759 hPsi_site_8250 iPseU_CNN:0.011157751083374;iRNA_PseU:0.988429363107759 8251 chr1 155582738 155582738 1 + C T UCEC 155582752 + 155582732 155582772 41 ATCTGGCTGACATGCTGAGCTTCTGTGGGAAAAAGGTATGA ATCTGGTTGACATGCTGAGCTTCTGTGGGAAAAAGGTATGA < 41bp 1 0.359313845667308 1 0.959454298019409 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582752 chr1:155582738 nonsynonymous SNV 0.930 3 7 hPsi_associated_SNPs_1726 0 0 1 0 1 Ribosome 1 0.661540229156678 0.0810914039611821 0.676919541686645 hPsi_site_8251 iPseU_CNN:0.0810914039611821;iRNA_PseU:0.676919541686645 8252 chr17 65916173 65916173 1 + G T UCEC 65916167 + 65916147 65916187 41 AATCACAACAACAGAAATAATTAAGAGGAGAGATGTTGGTC AATCACAACAACAGAAATAATTAAGATGAGAGATGTTGGTC < 41bp 1 0.231794549783848 1 0.00759604573249817 experiment 1 Functional Loss NA| BPTF ENSG00000171634 CDS Human protein_coding chr17:65916167 chr17:65916173 nonsynonymous SNV 1.000 3 27 hPsi_associated_SNPs_1727 0 0 1 0 2 Cytosol 1 0.438676672134618 1 1 hPsi_site_8252 iPseU_CNN:1;iRNA_PseU:1 8253 chrX 154282910 154282910 1 + G A UCEC 154282924 + 154282904 154282944 41 CTGGGGGATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC CTGGGGAATTTTTCGGAGGCTTTCTGCTTGGCATGGCATCC < 41bp 1 0.674778502570343 1 0.997094750404358 experiment 0.650442994859314 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154282924 chrX:154282910 nonsynonymous SNV 1.000 3 7 hPsi_associated_SNPs_1728 0 0 1 0 1 Ribosome 1 0.438718678592335 0.00581049919128396 1 hPsi_site_8253 iPseU_CNN:0.00581049919128396;iRNA_PseU:1 8254 chr4 123192454 123192454 1 + T G UCEC 123192452 + 123192432 123192472 41 ATCAAAGCAACTCAGACTGATATTAAACTTAGCAGATATAC ATCAAAGCAACTCAGACTGATAGTAAACTTAGCAGATATAC < 41bp 1 0.531293214624297 1 0.229759275913239 experiment 0.937413570751406 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123192452 chr4:123192454 nonsynonymous SNV 1.000 4 23 hPsi_associated_SNPs_1729 0 0 1 0 0 Nucleus 1 0.438788104889544 1 1 hPsi_site_8254 iPseU_CNN:1;iRNA_PseU:1 8255 chr11 9450102 9450102 1 + G T UCEC 9450120 + 9450100 9450140 41 AAGATCAGATGGAATACATGTTGCAGAATCATGTATTCCCT AATATCAGATGGAATACATGTTGCAGAATCATGTATTCCCT < 41bp 1 0.404392238506503 1 0.991926610469818 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide IPO7 ENSG00000205339 CDS Human protein_coding chr11:9450120 chr11:9450102 nonsynonymous SNV 1.000 4 3 hPsi_associated_SNPs_1730 0 0 1 0 1 Cytosol 1 0.438717059928569 0.016146779060364 1 hPsi_site_8255 iPseU_CNN:0.016146779060364;iRNA_PseU:1 8256 chr22 20759864 20759864 1 + C A UCEC 20759850 + 20759830 20759870 41 CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTCAGGT CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCATCAGGT < 41bp 1 0.297607921354641 1 0.953650593757629 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20759850 chr22:20759864 nonsynonymous SNV 0.001 0 35 hPsi_associated_SNPs_1731 0 0 0 0 0 Cytosol 1 0.43901362848213 0.0926988124847421 1 hPsi_site_8256 iPseU_CNN:0.0926988124847421;iRNA_PseU:1 8257 chr3 23930711 23930711 1 + C T UCEC 23930715 + 23930695 23930735 41 AACCATTTCTAAAGTCCTCCTTTCTATCTGCTCACTTCTTA AACCATTTCTAAAGTCTTCCTTTCTATCTGCTCACTTCTTA < 41bp 1 0.203327883654333 1 0.926120162010193 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBE2E1 ENSG00000170142 CDS Human protein_coding chr3:23930715 chr3:23930711 nonsynonymous SNV 1.000 5 17 hPsi_associated_SNPs_1732 0 0 1 0 1 chromatin 1 0.487696505465372 0.147759675979614 1 hPsi_site_8257 iPseU_CNN:0.147759675979614;iRNA_PseU:1 8258 chr5 118862852 118862852 1 + C T UCEC 118862835 + 118862815 118862855 41 TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTATATCCAG TTCTTTTTTAAAGGCTCGTTTTGCAAAACCAGTATATTCAG < 41bp 1 0.182467587620492 1 0.996818065643311 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118862835 chr5:118862852 nonsynonymous SNV 0.999 5 38 hPsi_associated_SNPs_1733 0 0 1 0 2 Cytosol 1 0.550258660621682 0.00636386871337802 0.899482678756635 hPsi_site_8258 iPseU_CNN:0.00636386871337802;iRNA_PseU:0.899482678756635 8259 chrX 128692617 128692617 1 + T C UCEC 128692622 + 128692602 128692642 41 TCTTTCAGGGCTTCTTGGATTTGAAGACAATTTTTCTTCTA TCTTTCAGGGCTTCTCGGATTTGAAGACAATTTTTCTTCTA < 41bp 1 0.617269099247797 1 0.999893307685852 experiment 0.765461801504406 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock OCRL ENSG00000122126 CDS Human protein_coding chrX:128692622 chrX:128692617 synonymous SNV . 0 16 hPsi_associated_SNPs_1734 0 0 0 0 1 Cytosol 1 0.438718521308146 0.000213384628295898 1 hPsi_site_8259 iPseU_CNN:0.000213384628295898;iRNA_PseU:1 8260 chr20 62658983 62658983 1 + C A UCEC 62658974 + 62658954 62658994 41 AGTTGAAGAAGTGTCCCCACTCCACACCCCTGTGGCTTTTG AGTTGAAGAAGTGTCCCCACTCCACACCCATGTGGCTTTTG < 41bp 1 0.251927605170467 1 0.991528391838074 experiment 1 Functional Loss NA| PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62658974 chr20:62658983 nonsynonymous SNV 0.888 3 30 hPsi_associated_SNPs_1735 0 0 1 0 1 Cytosol 1 0.438719217178541 0.0169432163238521 1 hPsi_site_8260 iPseU_CNN:0.0169432163238521;iRNA_PseU:1 8261 chr16 31926034 31926034 1 + C A UCEC 31926028 + 31926008 31926048 41 TTTGTTTCACCAGCAAATACTTTCTTCTTGTGCCAAAAGCT TTTGTTTCACCAGCAAATACTTTCTTATTGTGCCAAAAGCT < 41bp 1 0.133551235187544 1 0.994776904582977 experiment 1 Functional Loss NA| ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31926028 chr16:31926034 nonsynonymous SNV 0.023 1 27 hPsi_associated_SNPs_1736 0 0 1 0 0 chromatin 1 0.438794368974231 0.0104461908340461 1 hPsi_site_8261 iPseU_CNN:0.0104461908340461;iRNA_PseU:1 8262 chr2 198571001 198571001 1 + G A UCEC 198571019 + 198570999 198571039 41 TGGCTACCCAAATGCTGAGTTCAAATCTTGGTGGCCGGCCA TGACTACCCAAATGCTGAGTTCAAATCTTGGTGGCCGGCCA < 41bp 1 0.301054783577784 1 0.999999642372131 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571019 chr2:198571001 nonsynonymous SNV 0.999 2 3 hPsi_associated_SNPs_1737 0 0 1 0 0 Ribosome 1 0.781788215102907 7.15255737970821e-07 0.436423569794187 hPsi_site_8262 iPseU_CNN:7.15255737970821e-07;iRNA_PseU:0.436423569794187 8263 chr16 4925092 4925092 1 + C A UCEC 4925091 + 4925071 4925111 41 CAAAGCCACATTCAGTCAGCTCTGCAGGCTCATCTTACAAG CAAAGCCACATTCAGTCAGCTATGCAGGCTCATCTTACAAG < 41bp 1 0.621617710005947 1 0.999932527542114 experiment 0.756764579988106 Functional Loss NA| UBN1 ENSG00000118900 CDS Human protein_coding chr16:4925091 chr16:4925092 nonsynonymous SNV 0.015 1 22 hPsi_associated_SNPs_1738 0 0 1 0 0 Ribosome 1 0.442632828512072 0.000134944915771928 1 hPsi_site_8263 iPseU_CNN:0.000134944915771928;iRNA_PseU:1 Multiple congenital anomalies-hypotonia-seizures syndrome 3 Multiple congenital anomalies-hypotonia-seizures syndrome 3 8264 chr10 1090054 1090054 1 + G A UCEC 1090039 - 1090019 1090059 41 CACCTCGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTG CACCTTGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTG < 41bp 1 0.364126791697823 1 0.999928593635559 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control IDI1 ENSG00000067064 CDS Human protein_coding chr10:1090039 chr10:1090054 synonymous SNV . 0 6 hPsi_associated_SNPs_1739 0 0 1 0 1 Cytosol 1 0.441192824606452 0.000142812728882058 1 hPsi_site_8264 iPseU_CNN:0.000142812728882058;iRNA_PseU:1 8265 chr4 129128467 129128467 1 + A G UCEC 129128454 + 129128434 129128474 41 TTTTGGGCTTATTTGAAATATTCTCAATCTAAGACACAGTC TTTTGGGCTTATTTGAAATATTCTCAATCTAAGGCACAGTC < 41bp 1 0.555953775531763 1 0.999837040901184 experiment 0.888092448936474 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LARP1B ENSG00000138709 CDS Human protein_coding chr4:129128454 chr4:129128467 nonsynonymous SNV 0.273 2 34 hPsi_associated_SNPs_1740 0 0 0 2 2 Nucleus 1 0.573117315062168 0.000325918197632058 0.853765369875664 hPsi_site_8265 iPseU_CNN:0.000325918197632058;iRNA_PseU:0.853765369875664 8266 chr7 8095094 8095094 1 + G A UCEC 8095098 + 8095078 8095118 41 AGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAG AGGCAGCAACTACAACACAGTAAACAGAGTAGTCGTCACAG < 41bp 1 0.527321936446037 1 0.999926388263702 experiment 0.945356127107926 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLCCI1 ENSG00000106415 CDS Human protein_coding chr7:8095098 chr7:8095094 nonsynonymous SNV 0.888 3 17 hPsi_associated_SNPs_1741 0 0 1 0 2 Ribosome 1 0.690047056957078 0.000147223472596103 0.619905886085844 hPsi_site_8266 iPseU_CNN:0.000147223472596103;iRNA_PseU:0.619905886085844 8267 chr3 9803169 9803169 1 + G T UCEC 9803177 - 9803157 9803197 41 CCCTACAGCAAGGCTGTGGATTGCTGGTCCATAGGTGTCAT CCCTACAGCAAGGCTGTGGATTGCTGGTACATAGGTGTCAT < 41bp 1 0.226976882319446 1 0.943749904632568 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803177 chr3:9803169 nonsynonymous SNV 0.997 4 29 hPsi_associated_SNPs_1742 0 0 1 0 2 Ribosome 1 0.438719838803717 0.112500190734864 1 hPsi_site_8267 iPseU_CNN:0.112500190734864;iRNA_PseU:1 8268 chr11 117061437 117061437 1 + C T UCEC 117061417 + 117061397 117061437 41 TGGAGGGGCTGCTCAGTGCTTGCTATCATGTGTGCCCCAAC TGGAGGGGCTGCTCAGTGCTTGCTATCATGTGTGCCCCAAT < 41bp 1 0.165411744576088 1 0.97298926115036 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117061417 chr11:117061437 synonymous SNV . 0 41 hPsi_associated_SNPs_1743 0 0 1 0 2 Ribosome 1 0.984877002404879 0.05402147769928 0.0302459951902418 hPsi_site_8268 iPseU_CNN:0.05402147769928;iRNA_PseU:0.0302459951902418 8269 chr22 29695781 29695781 1 + C T UCEC 29695782 + 29695762 29695802 41 CCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGG CCTGGGGGGCCCCCTGGACTTTTGATGGAACAGATGGGAGG < 41bp 1 0.605351970474049 1 0.999509155750275 experiment 0.789296059051902 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695782 chr22:29695781 nonsynonymous SNV 1.000 3 20 hPsi_associated_SNPs_1744 0 0 1 0 1 Cytosol 1 0.438718592995134 0.000981688499450017 1 hPsi_site_8269 iPseU_CNN:0.000981688499450017;iRNA_PseU:1 8270 chr21 38568041 38568041 1 + C T UCEC 38568028 + 38568008 38568048 41 CGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGA CGACGATGGCCAAGGGCTTGTGACTTCTGCAAGTGACGTGA < 41bp 1 0.100998319707961 1 0.55604088306427 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38568028 chr21:38568041 synonymous SNV . 0 34 hPsi_associated_SNPs_1745 0 0 1 0 1 Cytosol 1 0.450543834786859 0.88791823387146 1 hPsi_site_8270 iPseU_CNN:0.88791823387146;iRNA_PseU:1 8271 chr12 32890091 32890091 1 + A C UCEC 32890082 + 32890062 32890102 41 CAGAGAATTACCTTCAGCTGTATCACGAGACAAGGTAAAAA CAGAGAATTACCTTCAGCTGTATCACGAGCCAAGGTAAAAA < 41bp 1 0.518924571236732 1 0.962499260902405 experiment 0.962150857526536 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DNM1L ENSG00000087470 CDS Human protein_coding chr12:32890082 chr12:32890091 nonsynonymous SNV 1.000 2 30 hPsi_associated_SNPs_1746 0 0 1 0 2 Ribosome 1 0.438718594324999 0.07500147819519 1 hPsi_site_8271 iPseU_CNN:0.07500147819519;iRNA_PseU:1 8272 chr12 6969366 6969366 1 + G A UCEC 6969351 + 6969331 6969371 41 GGCCTTCTCTCCGGGGAGTATTCCAAGCCAGTACCGGAGTC GGCCTTCTCTCCGGGGAGTATTCCAAGCCAGTACCAGAGTC < 41bp 1 0.216500805206967 1 0.992032766342163 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969351 chr12:6969366 synonymous SNV . 0 36 hPsi_associated_SNPs_1747 0 0 1 0 2 Nucleus 1 0.438718592993865 0.0159344673156741 1 hPsi_site_8272 iPseU_CNN:0.0159344673156741;iRNA_PseU:1 8273 chr8 145151988 145151988 1 + G A UCEC 145151971 + 145151951 145151991 41 ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCGCTG ATGTCCCAGATAGCCAAGGATGTGTGCACCTTCCTGCACTG < 41bp 1 0.329171440090999 1 0.317825496196747 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151971 chr8:145151988 nonsynonymous SNV 1.000 1 38 hPsi_associated_SNPs_1748 0 0 1 0 2 Ribosome 1 0.920067381946845 1 0.159865236106309 hPsi_site_8273 iPseU_CNN:1;iRNA_PseU:0.159865236106309 Spinal Muscular Atrophy, Dominant Spinal Muscular Atrophy, Dominant 8274 chr9 127113189 127113189 1 + T C UCEC 127113176 + 127113156 127113196 41 ACCAGAGACCTGACATCGGATACGTGCACCAGGTGGCCAAG ACCAGAGACCTGACATCGGATACGTGCACCAGGCGGCCAAG < 41bp 1 0.646606378360622 1 0.994654417037964 experiment 0.706787243278756 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NEK6 ENSG00000119408 CDS Human protein_coding chr9:127113176 chr9:127113189 nonsynonymous SNV 0.998 1 34 hPsi_associated_SNPs_1749 0 0 1 0 1 Cytosol 1 0.707214282409037 0.010691165924072 0.585571435181927 hPsi_site_8274 iPseU_CNN:0.010691165924072;iRNA_PseU:0.585571435181927 8275 chr1 155582749 155582749 1 + A C UCEC 155582752 + 155582732 155582772 41 ATCTGGCTGACATGCTGAGCTTCTGTGGGAAAAAGGTATGA ATCTGGCTGACATGCTGCGCTTCTGTGGGAAAAAGGTATGA < 41bp 1 0.368067606828181 1 0.98681366443634 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582752 chr1:155582749 nonsynonymous SNV 0.929 1 18 hPsi_associated_SNPs_1750 0 0 1 0 1 Ribosome 1 0.459845727794742 0.02637267112732 1 hPsi_site_8275 iPseU_CNN:0.02637267112732;iRNA_PseU:1 8276 chr12 70723257 70723257 1 + G A UCEC 70723240 + 70723220 70723260 41 ATGAGGGGGATGAGCAACAATACCCCTCAGTTAAATCGCAG ATGAGGGGGATGAGCAACAATACCCCTCAGTTAAATCACAG < 41bp 1 0.345231578543538 1 0.996371746063232 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70723240 chr12:70723257 nonsynonymous SNV 1.000 1 38 hPsi_associated_SNPs_1751 0 0 1 0 2 Nucleus 1 0.744733289799076 0.00725650787353604 0.510533420401848 hPsi_site_8276 iPseU_CNN:0.00725650787353604;iRNA_PseU:0.510533420401848 Spinal Muscular Atrophy, Dominant Spinal Muscular Atrophy, Dominant 8277 chr7 90014301 90014301 1 + G A UCEC 90014285 + 90014265 90014305 41 ATCATCCCCATATCTGCAGTTACTGGAGAAGGAATCGAAGA ATCATCCCCATATCTGCAGTTACTGGAGAAGGAATCAAAGA < 41bp 1 0.63902076569377 1 0.998465120792389 experiment 0.721958468612461 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:90014285 chr7:90014301 nonsynonymous SNV 0.986 0 37 hPsi_associated_SNPs_1752 0 0 1 0 1 chromatin 1 0.663012927349742 0.00306975841522195 0.673974145300516 hPsi_site_8277 iPseU_CNN:0.00306975841522195;iRNA_PseU:0.673974145300516 Pseudohypoaldosteronism, Type I, Dominant Pseudohypoaldosteronism, Type I, Dominant 8278 chrX 119739343 119739343 1 + G T UCEC 119739324 + 119739304 119739344 41 AACTTCAGTTATTAAGGGTATTAAGAATCAATTGATAGAGC AACTTCAGTTATTAAGGGTATTAAGAATCAATTGATAGATC < 41bp 1 0.456175586961107 1 0.997379422187805 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MCTS1 ENSG00000232119 CDS Human protein_coding chrX:119739324 chrX:119739343 nonsynonymous SNV 1.000 1 40 hPsi_associated_SNPs_1753 0 0 1 0 2 Cytosol 1 0.465160056946953 0.00524115562439009 1 hPsi_site_8278 iPseU_CNN:0.00524115562439009;iRNA_PseU:1 Pseudohypoaldosteronism, Type I, Dominant Pseudohypoaldosteronism, Type I, Dominant 8279 chr17 7611315 7611315 1 + C T UCEC 7611309 + 7611289 7611329 41 GGTGGTTATGTGCTGTACCCTCAGATCGGGGACCGGCTAGA GGTGGTTATGTGCTGTACCCTCAGATTGGGGACCGGCTAGA < 41bp 1 0.156013446653495 1 0.977496027946472 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611309 chr17:7611315 synonymous SNV . 0 27 hPsi_associated_SNPs_1755 0 0 0 0 1 exosome 1 0.438718624825173 0.0450079441070561 1 hPsi_site_8279 iPseU_CNN:0.0450079441070561;iRNA_PseU:1 8280 chr7 7278030 7278030 1 + G T UCEC 7278043 + 7278023 7278063 41 TTTATGAGTTCAGAAGAAAATAAAGACTTCCCTGCTGTGGG TTTATGATTTCAGAAGAAAATAAAGACTTCCCTGCTGTGGG < 41bp 1 0.444957190730978 1 0.8832927942276 experiment 1 Functional Loss NA| C1GALT1 ENSG00000106392 CDS Human protein_coding chr7:7278043 chr7:7278030 nonsynonymous SNV 1.000 2 8 hPsi_associated_SNPs_1756 0 0 1 0 0 Endoplasmic reticulum 1 0.439873376819876 0.2334144115448 1 hPsi_site_8280 iPseU_CNN:0.2334144115448;iRNA_PseU:1 8281 chr11 65270834 65270834 1 + C T UCEC 65270822 + 65270802 65270842 41 ATCGAGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCT ATCGAGCCTTTTTAAAATTGTAGGACTTGTTCTTGTGGGCT < 41bp 1 0.458031518069465 1 0.984165132045746 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|25192136;GSE58200;Pseudo-seq;Hela;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270822 chr11:65270834 . . 0 33 hPsi_associated_SNPs_1757 0 0 1 1 0 unknown 1 0.438724674938302 0.0316697359085081 1 hPsi_site_8281 iPseU_CNN:0.0316697359085081;iRNA_PseU:1 8282 chr17 59152328 59152328 1 + G A UCEC 59152309 + 59152289 59152329 41 CCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACGA CCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACAA < 41bp 1 0.176106507912671 1 0.995785772800446 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59152309 chr17:59152328 nonsynonymous SNV 0.994 3 40 hPsi_associated_SNPs_1758 0 0 0 0 2 Cytosol 1 0.439024671672039 0.008428454399108 1 hPsi_site_8282 iPseU_CNN:0.008428454399108;iRNA_PseU:1 8283 chr14 74040260 74040260 1 + A C UCEC 74040253 + 74040233 74040273 41 TGGAGACGCTCCATCTGGAGTACTTTGAAGAAGCCATGAAC TGGAGACGCTCCATCTGGAGTACTTTGCAGAAGCCATGAAC < 41bp 1 0.199837172224881 1 0.995421290397644 experiment 1 Functional Loss NA| ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74040253 chr14:74040260 nonsynonymous SNV 0.990 4 28 hPsi_associated_SNPs_1759 0 0 1 0 1 exosome 1 0.461414590627274 0.00915741920471191 1 hPsi_site_8283 iPseU_CNN:0.00915741920471191;iRNA_PseU:1 8284 chr10 3154459 3154459 1 + G A UCEC 3154464 + 3154444 3154484 41 AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGTGAGG AGGAGATTTCAAGATACGGTTCGACTCCGAGGGAGGTGAGG < 41bp 1 0.153924790491578 1 0.99406099319458 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PFKP ENSG00000067057 CDS Human protein_coding chr10:3154464 chr10:3154459 nonsynonymous SNV 0.003 3 16 hPsi_associated_SNPs_1760 0 0 1 0 2 Nucleus 1 0.441356449399318 0.0118780136108401 1 hPsi_site_8284 iPseU_CNN:0.0118780136108401;iRNA_PseU:1 8285 chr6 31931204 31931204 1 + G A UCEC 31931212 + 31931192 31931232 41 GGCTGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACC GGCTGAAGCGTCATCAGATCTATGTGATTAGCACTGTAACC < 41bp 1 0.465765123385665 1 0.993174731731415 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31931212 chr6:31931204 nonsynonymous SNV 0.987 4 13 hPsi_associated_SNPs_1761 0 0 1 0 1 chromatin 1 0.871417073109657 0.01365053653717 0.257165853780686 hPsi_site_8285 iPseU_CNN:0.01365053653717;iRNA_PseU:0.257165853780686 8286 chr2 233272417 233272417 1 + C T UCEC 233272414 + 233272394 233272434 41 TTGAGTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACG TTGAGTGCAGCCGCCCGCTTTAATCAGTGCAACACGACACG < 41bp 1 0.404957783726066 1 0.99964827299118 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide ALPPL2 ENSG00000163286 CDS Human protein_coding chr2:233272414 chr2:233272417 synonymous SNV . 0 24 hPsi_associated_SNPs_1762 0 0 0 0 1 exosome 1 0.438865753928725 0.000703454017640048 1 hPsi_site_8286 iPseU_CNN:0.000703454017640048;iRNA_PseU:1 8287 chr4 159825672 159825672 1 + T G UCEC 159825660 + 159825640 159825680 41 CTGTTGACTGCTATTGCCAGTACTCATTCTCCTTATGTGGC CTGTTGACTGCTATTGCCAGTACTCATTCTCCGTATGTGGC < 41bp 1 0.236337668733262 1 0.95152348279953 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159825660 chr4:159825672 synonymous SNV . 0 33 hPsi_associated_SNPs_1763 0 0 1 0 1 Ribosome 1 0.441717654399159 0.0969530344009399 1 hPsi_site_8287 iPseU_CNN:0.0969530344009399;iRNA_PseU:1 8288 chr5 72199549 72199549 1 + T C UCEC 72199553 + 72199533 72199573 41 CAGGATTTTATATTTTTTTGTGATGCCGTTGCATCATGGAT CAGGATTTTATATTTTCTTGTGATGCCGTTGCATCATGGAT < 41bp 1 0.0143242439039285 1 0.951682865619659 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72199553 chr5:72199549 nonsynonymous SNV 1.000 4 17 hPsi_associated_SNPs_1764 0 0 1 0 2 Cytosol 1 0.753088065457118 0.096634268760682 0.493823869085764 hPsi_site_8288 iPseU_CNN:0.096634268760682;iRNA_PseU:0.493823869085764 8289 chrX 51644761 51644761 1 + G T UCEC 51644776 + 51644756 51644796 41 AGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG AGCAATAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG < 41bp 1 0.394423992545952 1 0.981198668479919 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644776 chrX:51644761 nonsynonymous SNV 0.998 4 6 hPsi_associated_SNPs_1765 0 0 1 0 0 chromatin 1 0.438869549932728 0.037602663040162 1 hPsi_site_8289 iPseU_CNN:0.037602663040162;iRNA_PseU:1 8290 chr11 65270381 65270381 1 + A C UCEC 65270392 + 65270372 65270412 41 ATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAG ATAACCACACAAATAATGAATTGATGAGAAATACAATGAAG < 41bp 1 0.303235677411777 1 0.975299656391144 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|25192136;GSE58200;Pseudo-seq;Hela;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270392 chr11:65270381 . . 0 10 hPsi_associated_SNPs_1766 0 0 1 0 0 unknown 1 0.440556605753846 0.049400687217712 1 hPsi_site_8290 iPseU_CNN:0.049400687217712;iRNA_PseU:1 8291 chr2 207425875 207425875 1 + G T UCEC 207425894 + 207425874 207425914 41 AGAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC ATAAGCAGTCTGAGTTACTTTGGAGGTGTCTGTTCTCGCAC < 41bp 1 0.389950477393287 1 0.378237783908844 experiment 1 Functional Loss NA| ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207425894 chr2:207425875 nonsynonymous SNV 1.000 2 2 hPsi_associated_SNPs_1767 0 0 0 0 2 Ribosome 1 0.432283486050772 1 1 hPsi_site_8291 iPseU_CNN:1;iRNA_PseU:1 8292 chr1 22405021 22405021 1 + C T UCEC 22405038 + 22405018 22405058 41 AAACATGTCTCCTGATATCCTACACAACAAACAAATTTCCA AAATATGTCTCCTGATATCCTACACAACAAACAAATTTCCA < 41bp 1 0.658475403194269 1 0.998693823814392 experiment 0.683049193611462 Functional Loss NA| CDC42 ENSG00000070831 CDS Human protein_coding chr1:22405038 chr1:22405021 nonsynonymous SNV 1.000 5 4 hPsi_associated_SNPs_1769 0 0 1 0 2 Ribosome 1 0.993541141628757 0.00261235237121604 0.0129177167424854 hPsi_site_8292 iPseU_CNN:0.00261235237121604;iRNA_PseU:0.0129177167424854 8293 chr7 64389020 64389020 1 + C A UCEC 64389030 + 64389010 64389050 41 GTGGAAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACAT GTGGAAAAGCATTTAGTGTATTCTCAACCCTTACTAAACAT < 41bp 1 0.475148491707123 1 0.987346410751343 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64389030 chr7:64389020 synonymous SNV . 0 11 hPsi_associated_SNPs_1770 0 0 1 0 0 Cytosol 1 0.438717812412756 0.025307178497314 1 hPsi_site_8293 iPseU_CNN:0.025307178497314;iRNA_PseU:1 8294 chr3 160148911 160148911 1 + C T UCEC 160148899 + 160148879 160148919 41 TCAAGAAAATGAACATGCTCTTCAAAAAGATGCACTTAGTA TCAAGAAAATGAACATGCTCTTCAAAAAGATGTACTTAGTA < 41bp 1 0.479878241187058 1 0.996942758560181 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160148899 chr3:160148911 nonsynonymous SNV 1.000 2 33 hPsi_associated_SNPs_1771 0 0 1 0 2 Nucleus 1 0.55102606695283 0.00611448287963801 0.89794786609434 hPsi_site_8294 iPseU_CNN:0.00611448287963801;iRNA_PseU:0.89794786609434 8295 chr12 104732944 104732944 1 + G A UCEC 104732933 + 104732913 104732953 41 TTAGGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG TTAGGAACGTGTTGTGGGCTTTCACGTACTGAGTCCAAATG < 41bp 1 0.124601625764938 1 0.99497652053833 experiment 1 Functional Loss NA| TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732933 chr12:104732944 nonsynonymous SNV 1.000 3 32 hPsi_associated_SNPs_1772 0 0 1 1 1 Ribosome 1 0.438664610541153 0.0100469589233401 1 hPsi_site_8295 iPseU_CNN:0.0100469589233401;iRNA_PseU:1 8296 chr2 217279625 217279625 1 + C T UCEC 217279638 + 217279618 217279658 41 CAGTGAGCCATGGTGTCATTTTCAAGCAACAGAATCTCAGT CAGTGAGTCATGGTGTCATTTTCAAGCAACAGAATCTCAGT < 41bp 1 0.619356965619504 1 0.999977290630341 experiment 0.761286068760991 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217279638 chr2:217279625 synonymous SNV . 0 8 hPsi_associated_SNPs_1773 0 0 0 1 0 chromatin 1 0.91803030604756 4.54187393179595e-05 0.16393938790488 hPsi_site_8296 iPseU_CNN:4.54187393179595e-05;iRNA_PseU:0.16393938790488 8297 chr17 76395566 76395566 1 + G A UCEC 76395580 + 76395560 76395600 41 ACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAA ACCATCAGCCTCCAGCACATTAAGGTGTACCTCTTCGACAA < 41bp 1 0.668687725525195 1 0.999974370002747 experiment 0.66262454894961 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PGS1 ENSG00000087157 CDS Human protein_coding chr17:76395580 chr17:76395566 nonsynonymous SNV 0.987 4 7 hPsi_associated_SNPs_1774 0 0 1 0 1 chromatin 1 0.438718591934816 5.12599945059478e-05 1 hPsi_site_8297 iPseU_CNN:5.12599945059478e-05;iRNA_PseU:1 8298 chr11 47304056 47304056 1 + C T UCEC 47304048 + 47304028 47304068 41 TTTTCAAGCTGGCTCCTTTCTAGCCTCACGTCCCCGGCAGA TTTTCAAGCTGGCTCCTTTCTAGCCTCATGTCCCCGGCAGA < 41bp 1 0.550408912327885 1 0.883396744728088 experiment 0.899182175344231 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47304048 chr11:47304056 nonsynonymous SNV 1.000 4 29 hPsi_associated_SNPs_1775 0 0 1 0 0 Nucleus 1 0.598689602875711 0.233206510543824 0.802620794248578 hPsi_site_8298 iPseU_CNN:0.233206510543824;iRNA_PseU:0.802620794248578 8299 chr4 17609139 17609139 1 + G A UCEC 17609132 + 17609112 17609152 41 CCAACAAAGATGAAGTTCCCTATCTACGGAAAGGCATGACT CCAACAAAGATGAAGTTCCCTATCTACAGAAAGGCATGACT < 41bp 1 0.486929932351539 1 0.987563133239746 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LAP3 ENSG00000002549 CDS Human protein_coding chr4:17609132 chr4:17609139 nonsynonymous SNV 0.887 1 28 hPsi_associated_SNPs_1777 0 0 0 0 0 Ribosome 1 0.43871859305492 0.024873733520508 1 hPsi_site_8299 iPseU_CNN:0.024873733520508;iRNA_PseU:1 8300 chr13 45953376 45953376 1 + G A UCEC 45953356 + 45953336 45953376 41 GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGG GTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGA < 41bp 1 0.574890810142311 1 0.999531388282776 experiment 0.850218379715378 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45953356 chr13:45953376 . . 0 41 hPsi_associated_SNPs_1778 0 0 1 0 2 unknown 1 0.451303701263489 0.00093722343444802 1 hPsi_site_8300 iPseU_CNN:0.00093722343444802;iRNA_PseU:1 8301 chr10 3154465 3154465 1 + C T UCEC 3154464 + 3154444 3154484 41 AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGTGAGG AGGAGATTTCAAGATGCGGTTTGACTCCGAGGGAGGTGAGG < 41bp 1 0.59182568546463 1 0.991340041160583 experiment 0.816348629070741 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PFKP ENSG00000067057 CDS Human protein_coding chr10:3154464 chr10:3154465 stopgain 0.000 0 22 hPsi_associated_SNPs_1779 0 0 1 0 2 Nucleus 1 0.439341544343566 0.0173199176788339 1 hPsi_site_8301 iPseU_CNN:0.0173199176788339;iRNA_PseU:1 8302 chr22 19496090 19496090 1 + T G UCEC 19496091 + 19496071 19496111 41 GCAGACTTTCAGCATTCATTTTGGGTTCAAGCACAAGTTTC GCAGACTTTCAGCATTCATGTTGGGTTCAAGCACAAGTTTC < 41bp 1 0.402556894289938 1 0.992580354213715 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19496091 chr22:19496090 nonsynonymous SNV 0.998 3 20 hPsi_associated_SNPs_1780 0 0 1 0 1 Ribosome 1 0.536374313892199 0.0148392915725699 0.927251372215602 hPsi_site_8302 iPseU_CNN:0.0148392915725699;iRNA_PseU:0.927251372215602 Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome 8303 chr1 215781441 215781441 1 + T G UCEC 215781433 + 215781413 215781453 41 TGATCTCTACTCAGCCAGGTTCTACTCCTTTAGCGTCATTC TGATCTCTACTCAGCCAGGTTCTACTCCGTTAGCGTCATTC < 41bp 1 0.41158523759842 1 0.999938130378723 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215781433 chr1:215781441 synonymous SNV . 0 29 hPsi_associated_SNPs_1781 0 0 1 0 2 Ribosome 1 0.435134570141378 0.000123739242553933 1 hPsi_site_8303 iPseU_CNN:0.000123739242553933;iRNA_PseU:1 8304 chrX 51640953 51640953 1 + C A UCEC 51640940 + 51640920 51640960 41 CAAAGAAGAACACCTGTATATTCTCATCAGTACCCCCGAGT CAAAGAAGAACACCTGTATATTCTCATCAGTACACCCGAGT < 41bp 1 0.298589046493797 1 0.999959349632263 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640940 chrX:51640953 synonymous SNV . 0 34 hPsi_associated_SNPs_1782 0 0 1 0 2 chromatin 1 0.438719163456759 8.13007354740769e-05 1 hPsi_site_8304 iPseU_CNN:8.13007354740769e-05;iRNA_PseU:1 8305 chr10 93602106 93602106 1 + C T UCEC 93602098 + 93602078 93602118 41 GTTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG GTTGTCTTCTCCTGATAATGTAAATTGCTGCGATACCCAAG < 41bp 1 0.582676070827211 1 0.986403405666351 experiment 0.834647858345579 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93602098 chr10:93602106 nonsynonymous SNV 0.991 4 29 hPsi_associated_SNPs_1784 0 0 1 0 1 Ribosome 1 0.438716924011504 0.027193188667298 1 hPsi_site_8305 iPseU_CNN:0.027193188667298;iRNA_PseU:1 8306 chr9 115200754 115200754 1 + C T UCEC 115200751 + 115200731 115200771 41 GATATGCTGGGAGGACCTGGTATCGAAAGCCAGTGTAGAAA GATATGCTGGGAGGACCTGGTATTGAAAGCCAGTGTAGAAA < 41bp 1 0.605438247087813 1 0.982032537460327 experiment 0.789123505824375 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HSDL2 ENSG00000119471 CDS Human protein_coding chr9:115200751 chr9:115200754 synonymous SNV . 0 24 hPsi_associated_SNPs_1785 0 0 1 0 2 Ribosome 1 0.438739101881258 0.0359349250793459 1 hPsi_site_8306 iPseU_CNN:0.0359349250793459;iRNA_PseU:1 8307 chr22 45571938 45571938 1 + C T UCEC 45571919 + 45571899 45571939 41 ACATAACCAGTGCCCCTCCCTTCGCCAGTGCAAAGGCAGCG ACATAACCAGTGCCCCTCCCTTCGCCAGTGCAAAGGCAGTG < 41bp 1 0.201204598974528 1 0.989821493625641 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NUP50 ENSG00000093000 CDS Human protein_coding chr22:45571919 chr22:45571938 nonsynonymous SNV 0.001 0 40 hPsi_associated_SNPs_1786 0 0 1 0 1 Ribosome 1 0.447576711295116 0.020357012748718 1 hPsi_site_8307 iPseU_CNN:0.020357012748718;iRNA_PseU:1 not specified not specified 8308 chr2 172585252 172585252 1 + A G UCEC 172585268 + 172585248 172585288 41 AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCC AAACGGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCC < 41bp 1 0.447874707077098 1 0.999771118164062 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172585268 chr2:172585252 nonsynonymous SNV 1.000 2 5 hPsi_associated_SNPs_1787 0 0 1 0 1 Cytosol 1 0.43877404388875 0.00045776367187611 1 hPsi_site_8308 iPseU_CNN:0.00045776367187611;iRNA_PseU:1 8309 chr6 348899 348899 1 + G T UCEC 348901 + 348881 348921 41 GCGCCAGGCGGTGGAGCAGTTTTCCGGCACTGGCTCCGCTG GCGCCAGGCGGTGGAGCATTTTTCCGGCACTGGCTCCGCTG < 41bp 1 0.650656843261621 1 0.99997353553772 experiment 0.698686313476758 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348901 chr6:348899 nonsynonymous SNV 0.214 0 19 hPsi_associated_SNPs_1788 0 0 1 0 0 Ribosome 1 0.438718530195662 5.29289245601028e-05 1 hPsi_site_8309 iPseU_CNN:5.29289245601028e-05;iRNA_PseU:1 8310 chr5 70945074 70945074 1 + C T UCEC 70945064 + 70945044 70945084 41 GAGCCGGAAACTATGGGATGTGTGGCAGAGCATATAGGTAG GAGCCGGAAACTATGGGATGTGTGGCAGAGTATATAGGTAG < 41bp 1 0.0451187070883562 1 0.929327368736267 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70945064 chr5:70945074 nonsynonymous SNV 0.774 4 31 hPsi_associated_SNPs_1789 1 0 1 1 1 Ribosome 1 0.541554730137576 0.141345262527466 0.916890539724847 hPsi_site_8310 iPseU_CNN:0.141345262527466;iRNA_PseU:0.916890539724847 8311 chr20 44512679 44512679 1 + T C UCEC 44512693 + 44512673 44512713 41 AGCAGGTCCAACTCTGATTATTCTCGATGCCCAGAGATGCT AGCAGGCCCAACTCTGATTATTCTCGATGCCCAGAGATGCT < 41bp 1 0.510142590080341 1 0.932936549186707 experiment 0.979714819839319 Functional Loss NA| ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44512693 chr20:44512679 nonsynonymous SNV 0.976 1 7 hPsi_associated_SNPs_1790 0 0 1 0 0 nucleus 1 0.529309895773208 0.134126901626586 0.941380208453584 hPsi_site_8311 iPseU_CNN:0.134126901626586;iRNA_PseU:0.941380208453584 8312 chr7 111935991 111935991 1 + A G UCEC 111935973 + 111935953 111935993 41 CTGAACAGCCCATCACAGATTTTTGTAGTGTAATAAGAATT CTGAACAGCCCATCACAGATTTTTGTAGTGTAATAAGAGTT < 41bp 1 0.173220033687513 1 0.971226155757904 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111935973 chr7:111935991 nonsynonymous SNV 1.000 1 39 hPsi_associated_SNPs_1791 0 0 0 0 2 chromatin 1 0.578797081492856 0.0575476884841919 0.842405837014288 hPsi_site_8312 iPseU_CNN:0.0575476884841919;iRNA_PseU:0.842405837014288 8313 chr12 101683947 101683947 1 + G A UCEC 101683941 + 101683921 101683961 41 GATAAAAACGCACTTTTCAATTTAATGTTTCTTGATCTTGA GATAAAAACGCACTTTTCAATTTAATATTTCTTGATCTTGA < 41bp 1 0.297442917168312 1 0.987161040306091 experiment 1 Functional Loss NA| UTP20 ENSG00000120800 CDS Human protein_coding chr12:101683941 chr12:101683947 nonsynonymous SNV 1.000 1 27 hPsi_associated_SNPs_1792 0 0 1 0 1 Cytosol 1 0.44614679292703 0.025677919387818 1 hPsi_site_8313 iPseU_CNN:0.025677919387818;iRNA_PseU:1 8314 chr1 46079814 46079814 1 + C T UCEC 46079797 + 46079777 46079817 41 GAAAATGAGGAGGAGGAGATTGGGAACCTAGAGCTTGCCTG GAAAATGAGGAGGAGGAGATTGGGAACCTAGAGCTTGTCTG < 41bp 1 0.253748120981651 1 0.996414482593536 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NASP ENSG00000132780 CDS Human protein_coding chr1:46079797 chr1:46079814 nonsynonymous SNV 0.994 4 38 hPsi_associated_SNPs_1793 0 0 1 0 1 Nucleus 1 0.446356987645868 0.00717103481292791 1 hPsi_site_8314 iPseU_CNN:0.00717103481292791;iRNA_PseU:1 8315 chr20 62373760 62373760 1 + A G UCEC 62373766 + 62373746 62373786 41 GGATGTTGGTGTGGACACGCTGACCGACGGGCTGTCCAGCC GGATGTTGGTGTGGGCACGCTGACCGACGGGCTGTCCAGCC < 41bp 1 0.147889777905671 1 0.0706972181797028 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373766 chr20:62373760 nonsynonymous SNV 0.050 2 15 hPsi_associated_SNPs_1794 0 0 1 0 1 Cytosol 1 0.566033467359274 1 0.867933065281453 hPsi_site_8315 iPseU_CNN:1;iRNA_PseU:0.867933065281453 8316 chr17 18781089 18781089 1 + C T UCEC 18781102 + 18781082 18781122 41 TCATTGGCGTGATACCCTACTTTCCTTACAGCAAGCAGTGC TCATTGGTGTGATACCCTACTTTCCTTACAGCAAGCAGTGC < 41bp 1 0.248582391415975 1 0.999996900558472 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18781102 chr17:18781089 synonymous SNV . 0 8 hPsi_associated_SNPs_1796 0 0 1 0 2 Ribosome 1 0.533314749259953 6.19888305597449e-06 0.933370501480094 hPsi_site_8316 iPseU_CNN:6.19888305597449e-06;iRNA_PseU:0.933370501480094 8317 chr10 82191785 82191785 1 + T C UCEC 82191794 + 82191774 82191814 41 TGGAGACAAAGTAAACCTACTTTCTGTTCTGGAAGCTGCTA TGGAGACAAAGCAAACCTACTTTCTGTTCTGGAAGCTGCTA < 41bp 1 0.222799384819108 1 0.999882340431213 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FAM213A ENSG00000122378 CDS Human protein_coding chr10:82191794 chr10:82191785 nonsynonymous SNV 0.961 1 12 hPsi_associated_SNPs_1797 0 0 1 0 1 Ribosome 1 0.678367534020316 0.000235319137573908 0.643264931959369 hPsi_site_8317 iPseU_CNN:0.000235319137573908;iRNA_PseU:0.643264931959369 8318 chr2 73474927 73474927 1 + C T UCEC 73474929 + 73474909 73474949 41 GTGTTGCATTCAAGAAGACTTTCTCTTACGCTGGGTTTGAA GTGTTGCATTCAAGAAGATTTTCTCTTACGCTGGGTTTGAA < 41bp 1 0.315318218423096 1 0.995897769927979 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73474929 chr2:73474927 nonsynonymous SNV 1.000 4 19 hPsi_associated_SNPs_1798 0 0 1 0 1 Cytosol 1 0.529668917640371 0.00820446014404208 0.940662164719258 hPsi_site_8318 iPseU_CNN:0.00820446014404208;iRNA_PseU:0.940662164719258 8319 chr1 40205913 40205913 1 + G T UCEC 40205909 + 40205889 40205929 41 TTTTGGAGACATCACAGATATTCAGATTCCTCTGGATTATG TTTTGGAGACATCACAGATATTCATATTCCTCTGGATTATG < 41bp 1 0.677150133733302 1 0.998216688632965 experiment 0.645699732533396 Functional Loss NA| PPIE ENSG00000084072 CDS Human protein_coding chr1:40205909 chr1:40205913 nonsynonymous SNV 0.998 3 25 hPsi_associated_SNPs_1799 0 0 1 0 2 Ribosome 1 0.43871861294734 0.00356662273407005 1 hPsi_site_8319 iPseU_CNN:0.00356662273407005;iRNA_PseU:1 8320 chr12 123467047 123467047 1 + G T UCEC 123467054 + 123467034 123467074 41 CGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG CGAGGTCCTAGAGTAAATCGTAACCAAAGAACGACACAGAG < 41bp 1 0.451563739248741 1 0.999981999397278 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123467054 chr12:123467047 stopgain 1.000 1 14 hPsi_associated_SNPs_1803 0 0 1 1 2 Cytosol 1 0.438803505029979 3.60012054438918e-05 1 hPsi_site_8320 iPseU_CNN:3.60012054438918e-05;iRNA_PseU:1 8321 chr2 198570478 198570478 1 + G T UCEC 198570483 + 198570463 198570503 41 GAGCTGTGCGACCGAGTCTCTGAGCAGTTCCAGCAGCTTTT GAGCTGTGCGACCGATTCTCTGAGCAGTTCCAGCAGCTTTT < 41bp 1 0.132582198884081 1 0.346088111400604 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570483 chr2:198570478 nonsynonymous SNV 0.974 3 16 hPsi_associated_SNPs_1804 0 0 1 0 0 Ribosome 1 0.43869847239418 1 1 hPsi_site_8321 iPseU_CNN:1;iRNA_PseU:1 Nephronophthisis-Like Nephropathy Nephronophthisis-Like Nephropathy 8322 chr11 68369338 68369338 1 + G T UCEC 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACAAAATATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA < 41bp 1 0.626347091082114 1 0.952650308609009 experiment 0.747305817835772 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369338 nonsynonymous SNV 1.000 4 7 hPsi_associated_SNPs_1806 0 0 1 0 2 Nucleus 1 0.438712553633296 0.094699382781982 1 hPsi_site_8322 iPseU_CNN:0.094699382781982;iRNA_PseU:1 8323 chr1 35824675 35824675 1 + C A UCEC 35824685 + 35824665 35824705 41 CTCTGGGGATCTTGCAGGAATTCCAGTCGTTGGTAGTGACA CTCTGGGGATATTGCAGGAATTCCAGTCGTTGGTAGTGACA < 41bp 1 0.529583802443473 1 0.992291212081909 experiment 0.940832395113054 Functional Loss NA| ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824685 chr1:35824675 nonsynonymous SNV 1.000 3 11 hPsi_associated_SNPs_1807 0 0 1 0 0 Cytosol 1 0.438526628811456 0.0154175758361821 1 hPsi_site_8323 iPseU_CNN:0.0154175758361821;iRNA_PseU:1 8324 chr14 39650458 39650458 1 + A G UCEC 39650439 + 39650419 39650459 41 TGAGGATTTGTCATTAGCTGTTTTACAGCCAACACCCCAAG TGAGGATTTGTCATTAGCTGTTTTACAGCCAACACCCCAGG < 41bp 1 0.679582513973445 1 0.992065250873566 experiment 0.640834972053109 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PNN ENSG00000100941 CDS Human protein_coding chr14:39650439 chr14:39650458 synonymous SNV . 0 40 hPsi_associated_SNPs_1808 0 0 1 0 0 Nucleus 1 0.438717319439847 0.015869498252868 1 hPsi_site_8324 iPseU_CNN:0.015869498252868;iRNA_PseU:1 not specified not specified 8325 chr12 97337457 97337457 1 + G T UCEC 97337437 + 97337417 97337457 41 TTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAG TTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAT < 41bp 1 0.431839595146758 1 0.999970436096191 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97337437 chr12:97337457 stopgain 1.000 1 41 hPsi_associated_SNPs_1809 0 0 1 0 1 Nucleus 1 0.438718598669689 5.91278076180757e-05 1 hPsi_site_8325 iPseU_CNN:5.91278076180757e-05;iRNA_PseU:1 8326 chrX 150572170 150572170 1 + C A UCEC 150572174 + 150572154 150572194 41 TTTAATGATCACTGTTCCTATTGGGTTATATTTCACAACTA TTTAATGATCACTGTTACTATTGGGTTATATTTCACAACTA < 41bp 1 0.321158911663937 1 0.994644343852997 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VMA21 ENSG00000160131 CDS Human protein_coding chrX:150572174 chrX:150572170 nonsynonymous SNV 0.998 4 17 hPsi_associated_SNPs_1810 0 0 1 0 2 Ribosome 1 0.438697527084309 0.0107113122940059 1 hPsi_site_8326 iPseU_CNN:0.0107113122940059;iRNA_PseU:1 8327 chr11 68369342 68369342 1 + C A UCEC 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACAAAAGATTATTTAAGGAGTAATTCTCCAGTGGAAATGGA < 41bp 1 0.569355713924974 1 0.9907386302948 experiment 0.861288572150053 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369342 nonsynonymous SNV 0.999 3 11 hPsi_associated_SNPs_1811 0 0 1 0 2 Nucleus 1 0.438719066199396 0.0185227394103999 1 hPsi_site_8327 iPseU_CNN:0.0185227394103999;iRNA_PseU:1 8328 chr11 63525791 63525791 1 + T G UCEC 63525809 + 63525789 63525829 41 TTTTTTTTAATTTGGTGTTTTCTCCCATCCTTTCCCTTTAA TTGTTTTTAATTTGGTGTTTTCTCCCATCCTTTCCCTTTAA < 41bp 1 0.136255576683093 1 0.965748071670532 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RTN3 ENSG00000133318 CDS Human protein_coding chr11:63525809 chr11:63525791 nonsynonymous SNV 0.934 1 3 hPsi_associated_SNPs_1812 0 0 0 0 0 Endoplasmic reticulum 1 0.438718325030526 0.068503856658936 1 hPsi_site_8328 iPseU_CNN:0.068503856658936;iRNA_PseU:1 8329 chr2 170366907 170366907 1 + G T UCEC 170366924 + 170366904 170366944 41 ACAGACAAGGAAAACAGGGTTAAAAACCTTAGTGAAGTGTT ACATACAAGGAAAACAGGGTTAAAAACCTTAGTGAAGTGTT < 41bp 1 0.678658553361997 1 0.913769602775574 experiment 0.642682893276007 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control KLHL41 ENSG00000239474 CDS Human protein_coding chr2:170366924 chr2:170366907 nonsynonymous SNV 1.000 4 4 hPsi_associated_SNPs_1813 0 0 0 0 0 nucleoplasm 1 0.438718663291411 0.172460794448852 1 hPsi_site_8329 iPseU_CNN:0.172460794448852;iRNA_PseU:1 8330 chr11 122669682 122669682 1 + G A UCEC 122669678 + 122669658 122669698 41 TTATTAGAGAGCAATACCATTATCGATCATGTCTATTGCTC TTATTAGAGAGCAATACCATTATCAATCATGTCTATTGCTC < 41bp 1 0.405957375983824 1 0.488355875015259 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122669678 chr11:122669682 nonsynonymous SNV 0.003 1 25 hPsi_associated_SNPs_1814 0 0 0 0 2 Ribosome 1 0.438923006331022 1 1 hPsi_site_8330 iPseU_CNN:1;iRNA_PseU:1 8331 chr10 75867018 75867018 1 + A G UCEC 75867017 + 75866997 75867037 41 AGAGCTTCCTGGACTCAGGATATCGGATCCTGGGAGCTGTG AGAGCTTCCTGGACTCAGGATGTCGGATCCTGGGAGCTGTG < 41bp 1 0.199617923814312 1 0.793771386146545 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75867017 chr10:75867018 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_1815 0 0 1 0 2 Nucleus 1 0.667014147731398 0.41245722770691 0.665971704537205 hPsi_site_8331 iPseU_CNN:0.41245722770691;iRNA_PseU:0.665971704537205 8332 chr19 13051640 13051640 1 + C A UCEC 13051657 + 13051637 13051677 41 ATTCTCCCGATCCCAGTATCTATGCCTATGATAACTTTGGC ATTATCCCGATCCCAGTATCTATGCCTATGATAACTTTGGC < 41bp 1 0.428209092275794 1 0.999744176864624 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051657 chr19:13051640 nonsynonymous SNV 0.097 2 4 hPsi_associated_SNPs_1816 0 0 1 0 1 Ribosome 1 0.4386386005447 0.000511646270751953 1 hPsi_site_8332 iPseU_CNN:0.000511646270751953;iRNA_PseU:1 8333 chrX 19373558 19373558 1 + C T UCEC 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATCGCTATGGAATGGGAACGTTTGTTGAGAGAGCGGCAGCC < 41bp 1 0.634974026402353 1 0.999898791313171 experiment 0.730051947195295 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373558 nonsynonymous SNV 0.981 5 22 hPsi_associated_SNPs_1817 0 0 1 0 1 Ribosome 1 0.442269193494628 0.000202417373657893 1 hPsi_site_8333 iPseU_CNN:0.000202417373657893;iRNA_PseU:1 8334 chr11 134110010 134110010 1 + A G UCEC 134110008 + 134109988 134110028 41 ATCAAGATGGAGGTTGGGATTGAGGACTGTCTGCACATTGA ATCAAGATGGAGGTTGGGATTGGGGACTGTCTGCACATTGA < 41bp 1 0.214433688678345 1 0.937489330768585 experiment 1 Functional Loss NA| VPS26B ENSG00000151502 CDS Human protein_coding chr11:134110008 chr11:134110010 nonsynonymous SNV 0.994 4 23 hPsi_associated_SNPs_1818 0 0 1 0 1 Ribosome 1 0.438679315065455 0.12502133846283 1 hPsi_site_8334 iPseU_CNN:0.12502133846283;iRNA_PseU:1 8335 chr7 90014271 90014271 1 + C A UCEC 90014285 + 90014265 90014305 41 ATCATCCCCATATCTGCAGTTACTGGAGAAGGAATCGAAGA ATCATCACCATATCTGCAGTTACTGGAGAAGGAATCGAAGA < 41bp 1 0.614252733588869 1 0.99998414516449 experiment 0.771494532822262 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:90014285 chr7:90014271 nonsynonymous SNV 0.995 3 7 hPsi_associated_SNPs_1819 0 0 1 0 1 chromatin 1 0.444982502634863 3.17096710200637e-05 1 hPsi_site_8335 iPseU_CNN:3.17096710200637e-05;iRNA_PseU:1 8336 chr15 63433614 63433614 1 + C T UCEC 63433627 + 63433607 63433647 41 ATGGTTACCAAGTTGGGCTGTTTAAGAACTCAAATGAAAAT ATGGTTATCAAGTTGGGCTGTTTAAGAACTCAAATGAAAAT < 41bp 1 0.127873965047557 1 0.999439001083374 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LACTB ENSG00000103642 CDS Human protein_coding chr15:63433627 chr15:63433614 synonymous SNV . 0 8 hPsi_associated_SNPs_1820 0 0 0 0 0 Endoplasmic reticulum 1 0.971006151870829 0.00112199783325195 0.0579876962583419 hPsi_site_8336 iPseU_CNN:0.00112199783325195;iRNA_PseU:0.0579876962583419 8337 chr2 201950287 201950287 1 + A G UCEC 201950286 + 201950266 201950306 41 TGCTGCATTTGTGGTAGCTGTAGGAGCTGAATATTACCTGG TGCTGCATTTGTGGTAGCTGTGGGAGCTGAATATTACCTGG < 41bp 1 0.0297432327813746 1 0.664192140102386 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NDUFB3 ENSG00000119013 CDS Human protein_coding chr2:201950286 chr2:201950287 synonymous SNV . 0 22 hPsi_associated_SNPs_1821 0 0 1 0 0 Ribosome 1 0.438688239243954 0.671615719795228 1 hPsi_site_8337 iPseU_CNN:0.671615719795228;iRNA_PseU:1 8338 chr14 77929019 77929019 1 + C A UCEC 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAA < 41bp 1 0.0697034985469264 1 0.99547815322876 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929019 nonsynonymous SNV 1.000 3 41 hPsi_associated_SNPs_1822 0 0 1 0 2 Ribosome 1 0.439390684704744 0.00904369354248002 1 hPsi_site_8338 iPseU_CNN:0.00904369354248002;iRNA_PseU:1 not specified not specified 8339 chr16 28883924 28883924 1 + G A UCEC 28883910 + 28883890 28883930 41 CCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTCGATATGC CCGGGTCCAGCACCTGTGGTTCCAGTCCATTTTCAATATGC < 41bp 1 0.210646985480274 1 0.99427604675293 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883910 chr16:28883924 nonsynonymous SNV 1.000 3 35 hPsi_associated_SNPs_1823 0 0 1 0 1 Cytosol 1 0.443005873880703 0.01144790649414 1 hPsi_site_8339 iPseU_CNN:0.01144790649414;iRNA_PseU:1 8340 chr4 54257184 54257184 1 + C A UCEC 54257193 + 54257173 54257213 41 TAGGTGCTGATCTTTCTGATTATTTTAATTATGGGTTTAAT TAGGTGCTGATATTTCTGATTATTTTAATTATGGGTTTAAT < 41bp 1 0.498994465166471 1 0.107230693101883 experiment 1 Functional Loss NA| FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257193 chr4:54257184 nonsynonymous SNV 1.000 3 12 hPsi_associated_SNPs_1824 0 0 1 0 1 Nucleus 1 0.438718593000416 1 1 hPsi_site_8340 iPseU_CNN:1;iRNA_PseU:1 8341 chr2 231934843 231934843 1 + C T UCEC 231934834 + 231934814 231934854 41 AAAGTACTAAGAGTTCTAGTTAAAATCTACATGAACTTGGA AAAGTACTAAGAGTTCTAGTTAAAATCTATATGAACTTGGA < 41bp 1 0.662741787448221 1 0.911923110485077 experiment 0.674516425103559 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231934834 chr2:231934843 synonymous SNV . 0 30 hPsi_associated_SNPs_1825 0 0 1 0 1 Nucleus 1 0.467809180739541 0.176153779029846 1 hPsi_site_8341 iPseU_CNN:0.176153779029846;iRNA_PseU:1 8342 chr11 64950347 64950347 1 + G T UCEC 64950363 + 64950343 64950383 41 TGATGAGGCCTTCCCCCCGGTACCCCAGAGCCTGGGTTACA TGATTAGGCCTTCCCCCCGGTACCCCAGAGCCTGGGTTACA < 41bp 1 0.607480708716547 1 0.96913206577301 experiment 0.785038582566906 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950363 chr11:64950347 stopgain 0.997 0 5 hPsi_associated_SNPs_1826 0 0 1 0 1 Ribosome 1 0.438718586565715 0.0617358684539799 1 hPsi_site_8342 iPseU_CNN:0.0617358684539799;iRNA_PseU:1 8343 chrX 54469916 54469916 1 + C A UCEC 54469900 + 54469880 54469920 41 ACCAACGAGTTTGATACAGTTGTGGAAGACGGGAGTCTGCC ACCAACGAGTTTGATACAGTTGTGGAAGACGGGAGTATGCC < 41bp 1 0.325439099398478 1 0.999671220779419 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TSR2 ENSG00000158526 CDS Human protein_coding chrX:54469900 chrX:54469916 nonsynonymous SNV 1.000 4 37 hPsi_associated_SNPs_1827 0 0 1 0 2 Ribosome 1 0.438905607879289 0.000657558441162109 1 hPsi_site_8343 iPseU_CNN:0.000657558441162109;iRNA_PseU:1 8344 chrX 100880562 100880562 1 + G T UCEC 100880542 + 100880522 100880562 41 ATTGTCCTGAATAACTTGAGTGTGAATGCTGAAAATCAGCG ATTGTCCTGAATAACTTGAGTGTGAATGCTGAAAATCAGCT < 41bp 1 0.09686543851213 1 0.958056449890137 experiment 1 Functional Loss NA| ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880542 chrX:100880562 nonsynonymous SNV 1.000 1 41 hPsi_associated_SNPs_1828 0 0 1 0 0 Endoplasmic reticulum 1 0.4552210451435 0.0838871002197259 1 hPsi_site_8344 iPseU_CNN:0.0838871002197259;iRNA_PseU:1 8345 chr1 40525773 40525773 1 + G A UCEC 40525765 + 40525745 40525785 41 CAGCTCCATATGTGCAGGCATTTGACTCGCTGCTTGCTGGT CAGCTCCATATGTGCAGGCATTTGACTCACTGCTTGCTGGT < 41bp 1 0.327247876012932 1 0.999541282653809 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525765 chr1:40525773 synonymous SNV . 0 29 hPsi_associated_SNPs_1829 0 0 1 1 3 Ribosome 1 0.456209075126665 0.000917434692381924 1 hPsi_site_8345 iPseU_CNN:0.000917434692381924;iRNA_PseU:1 8346 chr2 73474911 73474911 1 + G A UCEC 73474929 + 73474909 73474949 41 GTGTTGCATTCAAGAAGACTTTCTCTTACGCTGGGTTTGAA GTATTGCATTCAAGAAGACTTTCTCTTACGCTGGGTTTGAA < 41bp 1 0.419230918831642 1 0.996331810951233 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73474929 chr2:73474911 nonsynonymous SNV 0.996 3 3 hPsi_associated_SNPs_1830 0 0 1 0 1 Cytosol 1 0.987203627582288 0.00733637809753396 0.0255927448354238 hPsi_site_8346 iPseU_CNN:0.00733637809753396;iRNA_PseU:0.0255927448354238 8347 chr16 30664243 30664243 1 + A G UCEC 30664253 + 30664233 30664273 41 AGGCCTCCCGACCCTCTGTGTTTGTGTCGCGAGCCCTTGAG AGGCCTCCCGGCCCTCTGTGTTTGTGTCGCGAGCCCTTGAG < 41bp 1 0.374780537244722 1 0.939818978309631 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664253 chr16:30664243 nonsynonymous SNV 0.987 1 11 hPsi_associated_SNPs_1831 0 0 1 0 1 Cytosol 1 0.512715337976961 0.120362043380738 0.974569324046077 hPsi_site_8347 iPseU_CNN:0.120362043380738;iRNA_PseU:0.974569324046077 8348 chrX 152960085 152960085 1 + C T UCEC 152960065 + 152960045 152960085 41 GGATGAAATGGTGCTGGTCCTTCTTCACCCCGCTGGTCTGC GGATGAAATGGTGCTGGTCCTTCTTCACCCCGCTGGTCTGT < 41bp 1 0.556070899695666 1 0.999876737594604 experiment 0.887858200608668 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152960065 chrX:152960085 synonymous SNV . 0 41 hPsi_associated_SNPs_1832 0 0 0 0 2 Ribosome 1 0.564308057221965 0.000246524810791904 0.87138388555607 hPsi_site_8348 iPseU_CNN:0.000246524810791904;iRNA_PseU:0.87138388555607 8349 chr12 123467050 123467050 1 + A G UCEC 123467054 + 123467034 123467074 41 CGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG CGAGGTCCTAGAGGAAGTCGTAACCAAAGAACGACACAGAG < 41bp 1 0.434423214092983 1 0.999883890151978 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123467054 chr12:123467050 nonsynonymous SNV 1.000 4 17 hPsi_associated_SNPs_1834 0 0 1 1 2 Cytosol 1 0.835332578614677 0.000232219696044034 0.329334842770645 hPsi_site_8349 iPseU_CNN:0.000232219696044034;iRNA_PseU:0.329334842770645 8350 chr6 44200635 44200635 1 + G A UCEC 44200637 + 44200617 44200657 41 GCAACATTAAGCCCCGCCGCTACCTGACTGTGGTCTTCGAG GCAACATTAAGCCCCGCCACTACCTGACTGTGGTCTTCGAG < 41bp 1 0.332815586586336 1 0.155744969844818 experiment 1 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44200637 chr6:44200635 nonsynonymous SNV 0.003 0 19 hPsi_associated_SNPs_1835 0 0 1 0 1 Endoplasmic reticulum 1 0.458703850046195 1 1 hPsi_site_8350 iPseU_CNN:1;iRNA_PseU:1 8351 chr3 47890791 47890791 1 + G T UCEC 47890774 + 47890754 47890794 41 CCTCCGCCCAGTGCAACGAGTACAGTGAGGAGGAGGAGCTG CCTCCGCCCAGTGCAACGAGTACAGTGAGGAGGAGGATCTG < 41bp 1 0.266842436359386 1 0.999563455581665 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47890774 chr3:47890791 nonsynonymous SNV 1.000 3 38 hPsi_associated_SNPs_1837 0 0 1 0 1 Cytosol 1 0.504478127309728 0.000873088836669922 0.991043745380544 hPsi_site_8351 iPseU_CNN:0.000873088836669922;iRNA_PseU:0.991043745380544 8352 chr16 68373321 68373321 1 + G A UCEC 68373310 + 68373290 68373330 41 GTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA GTGGTCGTGGAACAAGCTATTTCCCATCCACATGCAGACCA < 41bp 1 0.255021598292422 1 0.982897579669952 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373310 chr16:68373321 nonsynonymous SNV 0.009 3 32 hPsi_associated_SNPs_1838 0 0 1 0 1 Nucleus 1 0.951685604810602 0.0342048406600961 0.0966287903787959 hPsi_site_8352 iPseU_CNN:0.0342048406600961;iRNA_PseU:0.0966287903787959 8353 chr16 66997783 66997783 1 + G T UCEC 66997800 + 66997780 66997820 41 TATGGGGATGTGGTCGTGGTTACAGTCCAGTACCGCCTTGG TATTGGGATGTGGTCGTGGTTACAGTCCAGTACCGCCTTGG < 41bp 1 0.606174582814184 1 0.998562335968018 experiment 0.787650834371631 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:66997800 chr16:66997783 nonsynonymous SNV 0.002 1 4 hPsi_associated_SNPs_1839 0 0 0 0 2 nucleolus 1 0.970081049581376 0.00287532806396396 0.0598379008372478 hPsi_site_8353 iPseU_CNN:0.00287532806396396;iRNA_PseU:0.0598379008372478 8354 chr2 233431843 233431843 1 + G A UCEC 233431858 + 233431838 233431878 41 AGCCCGAATCCGGGACACACTTCGGCGAGTGCTTAACCTAC AGCCCAAATCCGGGACACACTTCGGCGAGTGCTTAACCTAC < 41bp 1 0.111771573852334 1 2.89082527160645e-05 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233431858 chr2:233431843 nonsynonymous SNV 1.000 3 6 hPsi_associated_SNPs_1840 0 0 1 0 2 Ribosome 1 0.510448155357928 1 0.979103689284144 hPsi_site_8354 iPseU_CNN:1;iRNA_PseU:0.979103689284144 8355 chr2 32667448 32667448 1 + T G UCEC 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACAGCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA < 41bp 1 0.11840504978672 1 0.998510599136353 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667448 nonsynonymous SNV 0.989 2 4 hPsi_associated_SNPs_1841 0 0 1 0 2 Nucleus 1 0.43881639354991 0.00297880172729403 1 hPsi_site_8355 iPseU_CNN:0.00297880172729403;iRNA_PseU:1 8356 chr15 91496509 91496509 1 + G A UCEC 91496497 + 91496477 91496517 41 TGCCGGGGGCTTGGCCATGCTTACCTCCATGCGGCCCACGC TGCCGGGGGCTTGGCCATGCTTACCTCCATGCAGCCCACGC < 41bp 1 0.324544804768736 1 0.999944925308228 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNC45A ENSG00000140553 CDS Human protein_coding chr15:91496497 chr15:91496509 nonsynonymous SNV 0.997 0 33 hPsi_associated_SNPs_1842 0 0 1 0 1 Nucleus 1 0.439037403788013 0.000110149383544034 1 hPsi_site_8356 iPseU_CNN:0.000110149383544034;iRNA_PseU:1 8357 chr10 75877872 75877872 1 + G A UCEC 75877869 + 75877849 75877889 41 TGAAGCTGCTTCAATCAAAATTCGAACAGATGCTGGATTTA TGAAGCTGCTTCAATCAAAATTCAAACAGATGCTGGATTTA < 41bp 1 0.268447548060927 1 0.984887361526489 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75877869 chr10:75877872 nonsynonymous SNV 1.000 4 24 hPsi_associated_SNPs_1843 0 0 1 0 1 Nucleus 1 0.438673925335355 0.0302252769470219 1 hPsi_site_8357 iPseU_CNN:0.0302252769470219;iRNA_PseU:1 8358 chr14 39597504 39597504 1 + G A UCEC 39597508 + 39597488 39597528 41 CAGTAACTAGTGTCTTGGAATATCTGAGTAATTGGTTTGGA CAGTAACTAGTGTCTTAGAATATCTGAGTAATTGGTTTGGA < 41bp 1 0.201687984739211 1 0.997429549694061 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39597508 chr14:39597504 synonymous SNV . 0 17 hPsi_associated_SNPs_1844 0 0 1 1 2 Ribosome 1 0.438716027064054 0.00514090061187811 1 hPsi_site_8358 iPseU_CNN:0.00514090061187811;iRNA_PseU:1 8359 chr6 30595489 30595489 1 + A G UCEC 30595480 + 30595460 30595500 41 TAACCGCCATGTTGTTTATATTCTCAAAGACAGTTCAGCCC TAACCGCCATGTTGTTTATATTCTCAAAGGCAGTTCAGCCC < 41bp 1 0.238322432811717 1 0.988295793533325 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAT1 ENSG00000137343 CDS Human protein_coding chr6:30595480 chr6:30595489 nonsynonymous SNV 0.969 4 30 hPsi_associated_SNPs_1845 0 0 1 0 2 chromatin 1 0.663122795278306 0.0234084129333501 0.673754409443388 hPsi_site_8359 iPseU_CNN:0.0234084129333501;iRNA_PseU:0.673754409443388 8360 chr8 28575136 28575136 1 + C G UCEC 28575142 + 28575122 28575162 41 TGGGAGACTTACTTCTCCACTGCTGACAGTATTTTTAATAC TGGGAGACTTACTTGTCCACTGCTGACAGTATTTTTAATAC < 41bp 1 0.0351558359401449 1 0.999958455562592 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575142 chr8:28575136 nonsynonymous SNV 1.000 2 15 hPsi_associated_SNPs_1846 0 0 1 0 0 Endoplasmic reticulum 1 0.439517817859724 8.30888748160064e-05 1 hPsi_site_8360 iPseU_CNN:8.30888748160064e-05;iRNA_PseU:1 8361 chr6 24503570 24503570 1 + G A UCEC 24503574 + 24503554 24503594 41 TCTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACAC TCTGAGGAAGCCCGCCATGTTTACGGAGACATTATCCACAC < 41bp 1 0.325371681459938 1 0.999943614006042 experiment 1 Functional Loss NA| ALDH5A1 ENSG00000112294 CDS Human protein_coding chr6:24503574 chr6:24503570 nonsynonymous SNV 0.471 4 17 hPsi_associated_SNPs_1847 0 0 1 0 2 Nucleus 1 0.689048521660637 0.000112771987915927 0.621902956678727 hPsi_site_8361 iPseU_CNN:0.000112771987915927;iRNA_PseU:0.621902956678727 8362 chr17 78079631 78079631 1 + C T UCEC 78079624 + 78079604 78079644 41 CAGCCGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCG CAGCCGGGCACCGTCCCCACTCTACAGTGTGGAGTTCTCCG < 41bp 1 0.0568626304321778 1 0.925711691379547 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GAA ENSG00000171298 CDS Human protein_coding chr17:78079624 chr17:78079631 synonymous SNV . 0 28 hPsi_associated_SNPs_1848 0 0 1 0 2 Endoplasmic reticulum 1 0.439234329241092 0.148576617240906 1 hPsi_site_8362 iPseU_CNN:0.148576617240906;iRNA_PseU:1 8363 chr1 45479419 45479419 1 + C T UCEC 45479409 + 45479389 45479429 41 GTGTTCCAAGCCATCACCCTTACCCGACAACGACTGGCTGG GTGTTCCAAGCCATCACCCTTACCCGACAATGACTGGCTGG < 41bp 1 0.222008953062315 1 0.934582948684692 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479409 chr1:45479419 stopgain 0.998 0 31 hPsi_associated_SNPs_1849 0 0 1 0 1 Ribosome 1 0.823546776766312 0.130834102630616 0.352906446467376 hPsi_site_8363 iPseU_CNN:0.130834102630616;iRNA_PseU:0.352906446467376 8364 chr1 45479414 45479414 1 + G A UCEC 45479409 + 45479389 45479429 41 GTGTTCCAAGCCATCACCCTTACCCGACAACGACTGGCTGG GTGTTCCAAGCCATCACCCTTACCCAACAACGACTGGCTGG < 41bp 1 0.227379676725594 1 0.996923506259918 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479409 chr1:45479414 nonsynonymous SNV 1.000 5 26 hPsi_associated_SNPs_1850 0 0 1 0 1 Ribosome 1 0.43871859247003 0.00615298748016402 1 hPsi_site_8364 iPseU_CNN:0.00615298748016402;iRNA_PseU:1 8365 chr14 23344904 23344904 1 + G A UCEC 23344897 + 23344877 23344917 41 CTTGGGCTTTGGAGATGCAGTGCATGTGTATGACGGCCCTG CTTGGGCTTTGGAGATGCAGTGCATGTATATGACGGCCCTG < 41bp 1 0.315335506528082 1 0.989763796329498 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide LRP10 ENSG00000197324 CDS Human protein_coding chr14:23344897 chr14:23344904 synonymous SNV . 0 28 hPsi_associated_SNPs_1851 0 0 1 0 0 Ribosome 1 0.896874492439957 0.0204724073410041 0.206251015120087 hPsi_site_8365 iPseU_CNN:0.0204724073410041;iRNA_PseU:0.206251015120087 8366 chr10 93602079 93602079 1 + T G UCEC 93602098 + 93602078 93602118 41 GTTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG GGTGTCTTCTCCTGATAATGTAAATTGCCGCGATACCCAAG < 41bp 1 0.211406676085198 1 0.997177541255951 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93602098 chr10:93602079 nonsynonymous SNV 0.984 3 2 hPsi_associated_SNPs_1853 0 0 1 0 1 Ribosome 1 0.43875966387569 0.00564491748809792 1 hPsi_site_8366 iPseU_CNN:0.00564491748809792;iRNA_PseU:1 8367 chr19 13249215 13249215 1 + C T UCEC 13249213 + 13249193 13249233 41 GGGTCCCTCGGCTGAAGCCCTGCAGTAACCCGCCCAGCCTC GGGTCCCTCGGCTGAAGCCCTGTAGTAACCCGCCCAGCCTC < 41bp 1 0.419698067332271 1 0.867834448814392 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NACC1 ENSG00000160877 CDS Human protein_coding chr19:13249213 chr19:13249215 stopgain 0.290 0 23 hPsi_associated_SNPs_1854 0 0 1 0 0 Ribosome 1 0.439649646515173 0.264331102371216 1 hPsi_site_8367 iPseU_CNN:0.264331102371216;iRNA_PseU:1 8368 chr20 60882481 60882481 1 + G A UCEC 60882465 + 60882445 60882485 41 CTGGACCTGGCCTGGCCAGCTTACTGGGGAGCAGTGGGCCT CTGGACCTGGCCTGGCCAGCTTACTGGGGAGCAGTGAGCCT < 41bp 1 0.546112515129055 1 0.991511702537537 experiment 0.907774969741891 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock|26075521;GSE63655;CeU-Seq;HEK293T;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882465 chr20:60882481 nonsynonymous SNV 0.915 1 37 hPsi_associated_SNPs_1855 0 0 1 0 2 Ribosome 1 0.442712871673052 0.0169765949249261 1 hPsi_site_8368 iPseU_CNN:0.0169765949249261;iRNA_PseU:1 8369 chr11 20388748 20388748 1 + T C UCEC 20388756 + 20388736 20388776 41 ACTTTGAAAAGTTGGATGACTACGCCTCTGCCTTTCAAGGT ACTTTGAAAAGTCGGATGACTACGCCTCTGCCTTTCAAGGT < 41bp 1 0.451760516807462 1 0.983448624610901 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20388756 chr11:20388748 nonsynonymous SNV 0.936 4 13 hPsi_associated_SNPs_1856 0 0 1 0 2 Endoplasmic reticulum 1 0.495773821695615 0.033102750778198 1 hPsi_site_8369 iPseU_CNN:0.033102750778198;iRNA_PseU:1 8370 chr14 39650430 39650430 1 + C T UCEC 39650439 + 39650419 39650459 41 TGAGGATTTGTCATTAGCTGTTTTACAGCCAACACCCCAAG TGAGGATTTGTTATTAGCTGTTTTACAGCCAACACCCCAAG < 41bp 1 0.227835484550571 1 0.98665463924408 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PNN ENSG00000100941 CDS Human protein_coding chr14:39650439 chr14:39650430 nonsynonymous SNV 0.990 0 12 hPsi_associated_SNPs_1857 0 0 1 0 0 Nucleus 1 0.436518526838759 0.0266907215118399 1 hPsi_site_8370 iPseU_CNN:0.0266907215118399;iRNA_PseU:1 8371 chr10 126655262 126655262 1 + G A UCEC 126655266 + 126655246 126655286 41 GTACGCTTGCTGAATCGTCCTTCTGCCTTTGATGTTGGCTA GTACGCTTGCTGAATCATCCTTCTGCCTTTGATGTTGGCTA < 41bp 1 0.400101264536393 1 0.989530324935913 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126655266 chr10:126655262 nonsynonymous SNV 0.998 4 17 hPsi_associated_SNPs_1859 0 0 1 0 2 Ribosome 1 0.910651548146158 0.0209393501281741 0.178696903707685 hPsi_site_8371 iPseU_CNN:0.0209393501281741;iRNA_PseU:0.178696903707685 8372 chr17 7126082 7126082 1 + G T UCEC 7126095 + 7126075 7126115 41 TGGGTGAGGTTGGGAGTGGCTTCAAGGTTGCCATGCACATC TGGGTGATGTTGGGAGTGGCTTCAAGGTTGCCATGCACATC < 41bp 1 0.418637978410696 1 0.99399071931839 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ACADVL ENSG00000072778 CDS Human protein_coding chr17:7126095 chr17:7126082 nonsynonymous SNV 0.967 2 8 hPsi_associated_SNPs_1860 0 0 1 1 1 Endoplasmic reticulum 1 0.437357581014135 0.01201856136322 1 hPsi_site_8372 iPseU_CNN:0.01201856136322;iRNA_PseU:1 8373 chr2 171818208 171818208 1 + A C UCEC 171818194 + 171818174 171818214 41 TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGT TGTACCAACAGTACCGTTATTGCCACCACAAGTACACCAGT < 41bp 1 0.381547892400748 1 0.999514877796173 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818194 chr2:171818208 nonsynonymous SNV 1.000 1 35 hPsi_associated_SNPs_1862 0 0 1 0 2 Ribosome 1 0.438977706564769 0.000970244407654031 1 hPsi_site_8373 iPseU_CNN:0.000970244407654031;iRNA_PseU:1 8374 chrX 150572171 150572171 1 + C A UCEC 150572174 + 150572154 150572194 41 TTTAATGATCACTGTTCCTATTGGGTTATATTTCACAACTA TTTAATGATCACTGTTCATATTGGGTTATATTTCACAACTA < 41bp 1 0.521151143900795 1 0.996509492397308 experiment 0.957697712198411 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VMA21 ENSG00000160131 CDS Human protein_coding chrX:150572174 chrX:150572171 nonsynonymous SNV 0.999 4 18 hPsi_associated_SNPs_1863 0 0 1 0 2 Ribosome 1 0.438662602787546 0.00698101520538397 1 hPsi_site_8374 iPseU_CNN:0.00698101520538397;iRNA_PseU:1 8375 chr5 139918963 139918963 1 + C T UCEC 139918972 + 139918952 139918992 41 TGGCACGTGGGCACCTCATATTGGAAACATGCATCTCAAAT TGGCACGTGGGTACCTCATATTGGAAACATGCATCTCAAAT < 41bp 1 0.352947953449154 1 0.988409101963043 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock ANKHD1 ENSG00000131503 CDS Human protein_coding chr5:139918972 chr5:139918963 nonsynonymous SNV 1.000 3 12 hPsi_associated_SNPs_1864 0 0 1 0 1 Ribosome 1 0.787275779311451 0.023181796073914 0.425448441377098 hPsi_site_8375 iPseU_CNN:0.023181796073914;iRNA_PseU:0.425448441377098 8376 chrX 19373540 19373540 1 + G A UCEC 19373557 + 19373537 19373577 41 ATCGCTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC ATCACTATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCC < 41bp 1 0.354898012630342 1 0.979860901832581 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373557 chrX:19373540 nonsynonymous SNV 1.000 2 4 hPsi_associated_SNPs_1865 0 0 1 0 1 Ribosome 1 0.446758513665265 0.040278196334838 1 hPsi_site_8376 iPseU_CNN:0.040278196334838;iRNA_PseU:1 8377 chr3 47888101 47888101 1 + G A UCEC 47888104 + 47888084 47888124 41 GGCCCCTCCCTGCGCCGGAATGTGGGCTTCCAGGTGCGGTT GGCCCCTCCCTGCGCCGAAATGTGGGCTTCCAGGTGCGGTT < 41bp 1 0.278748509259929 1 0.604210495948792 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47888104 chr3:47888101 synonymous SNV . 0 18 hPsi_associated_SNPs_1866 0 0 1 0 0 Cytosol 1 0.439383761119409 0.791579008102416 1 hPsi_site_8377 iPseU_CNN:0.791579008102416;iRNA_PseU:1 8378 chr2 172585267 172585267 1 + C T UCEC 172585268 + 172585248 172585288 41 AAACAGTCAAAAGCAGTAGCTGTGACATCTATGTCCTTCCC AAACAGTCAAAAGCAGTAGTTGTGACATCTATGTCCTTCCC < 41bp 1 0.512372782004244 1 0.999446988105774 experiment 0.975254435991512 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172585268 chr2:172585267 nonsynonymous SNV 1.000 4 20 hPsi_associated_SNPs_1867 0 0 0 0 2 Cytosol 1 0.513024091293247 0.00110602378845193 0.973951817413505 hPsi_site_8378 iPseU_CNN:0.00110602378845193;iRNA_PseU:0.973951817413505 8379 chr17 7319293 7319293 1 + G A UCEC 7319308 + 7319288 7319328 41 CGCACGGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG CGCACAGGGATGAACTGCCCTATGTCTTTGGCGTGCCCATG < 41bp 1 0.554439381041283 1 0.998744487762451 experiment 0.891121237917433 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7319308 chr17:7319293 nonsynonymous SNV 0.658 4 6 hPsi_associated_SNPs_1868 0 0 0 0 0 chromatin 1 0.459136907488578 0.0025110244750981 1 hPsi_site_8379 iPseU_CNN:0.0025110244750981;iRNA_PseU:1 8380 chr20 44052877 44052877 1 + C T UCEC 44052889 + 44052869 44052909 41 CCAGCCTGCCCAGGACCGGCTGCAACCCCACCTCCTGGAGA CCAGCCTGTCCAGGACCGGCTGCAACCCCACCTCCTGGAGA < 41bp 1 0.682335822632296 1 0.915546178817749 experiment 0.635328354735408 Functional Loss 25192136;GSE58200;Pseudo-seq;Hela;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44052889 chr20:44052877 nonsynonymous SNV 0.996 3 9 hPsi_associated_SNPs_1869 0 0 0 0 1 Ribosome 1 0.438785099911998 0.168907642364502 1 hPsi_site_8380 iPseU_CNN:0.168907642364502;iRNA_PseU:1 8381 chr5 126862412 126862412 1 + C A UCEC 126862419 + 126862399 126862439 41 GAGCAAGAAGACCCTAGAATTACTAGAGGTCAGGATGAAGC GAGCAAGAAGACCATAGAATTACTAGAGGTCAGGATGAAGC < 41bp 1 0.637416672019946 1 0.82947838306427 experiment 0.725166655960108 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126862419 chr5:126862412 nonsynonymous SNV 0.430 4 14 hPsi_associated_SNPs_1870 0 0 1 0 1 Nucleus 1 0.438773173716465 0.34104323387146 1 hPsi_site_8381 iPseU_CNN:0.34104323387146;iRNA_PseU:1 8382 chr16 89629400 89629400 1 + G A UCEC 89629388 + 89629368 89629408 41 CCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGA CCCGTGCCAACGCCCGGCTCTTCGGCATACGGACAAAAAGA < 41bp 1 0.0629979337357721 1 0.983172833919525 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629388 chr16:89629400 nonsynonymous SNV 0.797 0 33 hPsi_associated_SNPs_1871 0 0 0 0 0 Cytosol 1 0.438837110635831 0.0336543321609499 1 hPsi_site_8382 iPseU_CNN:0.0336543321609499;iRNA_PseU:1 8383 chr1 43826529 43826529 1 + C T UCEC 43826539 + 43826519 43826559 41 CGACATTTGGCCAGTGGTGGTAATGATAACTTGGTCAATGT CGACATTTGGTCAGTGGTGGTAATGATAACTTGGTCAATGT < 41bp 1 0.0915811649217689 1 0.999633073806763 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CDC20 ENSG00000117399 CDS Human protein_coding chr1:43826539 chr1:43826529 nonsynonymous SNV 1.000 1 11 hPsi_associated_SNPs_1872 0 0 1 0 0 Ribosome 1 0.443262875566687 0.000733852386473943 1 hPsi_site_8383 iPseU_CNN:0.000733852386473943;iRNA_PseU:1 8384 chr12 102558280 102558280 1 + A C UCEC 102558298 + 102558278 102558318 41 TGACCTGGCTGTGGCTTATATTCTCAATATTCCTGATAGAG TGCCCTGGCTGTGGCTTATATTCTCAATATTCCTGATAGAG < 41bp 1 0.0631404476467875 1 0.99742317199707 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PARPBP ENSG00000185480 CDS Human protein_coding chr12:102558298 chr12:102558280 nonsynonymous SNV 1.000 4 3 hPsi_associated_SNPs_1873 0 0 1 0 1 chromatin 1 0.438720335020658 0.00515365600586004 1 hPsi_site_8384 iPseU_CNN:0.00515365600586004;iRNA_PseU:1 8385 chr3 31663663 31663663 1 + G A UCEC 31663646 + 31663626 31663666 41 AGTGATGGTGCGACTGATGTTGACTTTGACTCCAGTCGTGT AGTGATGGTGCGACTGATGTTGACTTTGACTCCAGTCATGT < 41bp 1 0.0898533985061115 1 0.847535192966461 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31663646 chr3:31663663 nonsynonymous SNV 0.997 3 38 hPsi_associated_SNPs_1874 0 0 1 0 1 Nucleus 1 0.986713300267885 0.304929614067078 0.0265733994642292 hPsi_site_8385 iPseU_CNN:0.304929614067078;iRNA_PseU:0.0265733994642292 8386 chr10 3154478 3154478 1 + G T UCEC 3154464 + 3154444 3154484 41 AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGTGAGG AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGATGTGAGG < 41bp 1 0.384899850192673 1 0.987988173961639 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PFKP ENSG00000067057 CDS Human protein_coding chr10:3154464 chr10:3154478 nonsynonymous SNV 0.303 2 35 hPsi_associated_SNPs_1875 0 0 1 0 2 Nucleus 1 0.439766072992253 0.0240236520767221 1 hPsi_site_8386 iPseU_CNN:0.0240236520767221;iRNA_PseU:1 8387 chr12 6971694 6971694 1 + C T UCEC 6971692 + 6971672 6971712 41 TCCAGATCAAGAAGTTCACCTTCGGCTTAGACTGGGTGCCC TCCAGATCAAGAAGTTCACCTTTGGCTTAGACTGGGTGCCC < 41bp 1 0.689176850353966 1 0.9953773021698 experiment 0.621646299292069 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6971692 chr12:6971694 synonymous SNV . 0 23 hPsi_associated_SNPs_1876 0 0 1 0 2 Nucleus 1 0.438718597325204 0.00924539566039995 1 hPsi_site_8387 iPseU_CNN:0.00924539566039995;iRNA_PseU:1 8388 chr11 47074027 47074027 1 + C T UCEC 47074021 + 47074001 47074041 41 CCCCCCACAATAGGGTATCATTTTTACGGGCCTTCTGGAGA CCCCCCACAATAGGGTATCATTTTTATGGGCCTTCTGGAGA < 41bp 1 0.589230741102345 1 0.87702465057373 experiment 0.821538517795311 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47074021 chr11:47074027 nonsynonymous SNV 0.997 4 27 hPsi_associated_SNPs_1877 0 0 1 0 2 chromatin 1 0.780011724945914 0.24595069885254 0.439976550108172 hPsi_site_8388 iPseU_CNN:0.24595069885254;iRNA_PseU:0.439976550108172 8389 chr3 31663636 31663636 1 + C T UCEC 31663646 + 31663626 31663666 41 AGTGATGGTGCGACTGATGTTGACTTTGACTCCAGTCGTGT AGTGATGGTGTGACTGATGTTGACTTTGACTCCAGTCGTGT < 41bp 1 0.48028929682401 1 0.935954332351685 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31663646 chr3:31663636 stopgain 0.997 1 11 hPsi_associated_SNPs_1878 0 0 1 0 1 Nucleus 1 0.44196935641752 0.12809133529663 1 hPsi_site_8389 iPseU_CNN:0.12809133529663;iRNA_PseU:1 8390 chr3 136046551 136046551 1 + G A UCEC 136046533 + 136046513 136046553 41 ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAGAG ACCTTTGTGGTGATACCAACTATGCCTGGCCCACCGCAAAG < 41bp 1 0.576457202230883 1 0.999992847442627 experiment 0.847085595538234 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136046533 chr3:136046551 nonsynonymous SNV 0.999 5 39 hPsi_associated_SNPs_1879 0 0 1 0 2 Ribosome 1 0.898800273065713 1.43051147460938e-05 0.202399453868574 hPsi_site_8390 iPseU_CNN:1.43051147460938e-05;iRNA_PseU:0.202399453868574 8391 chrX 100880541 100880541 1 + G T UCEC 100880542 + 100880522 100880562 41 ATTGTCCTGAATAACTTGAGTGTGAATGCTGAAAATCAGCG ATTGTCCTGAATAACTTGATTGTGAATGCTGAAAATCAGCG < 41bp 1 0.424065578193881 1 0.366491585969925 experiment 1 Functional Loss NA| ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880542 chrX:100880541 nonsynonymous SNV 1.000 4 20 hPsi_associated_SNPs_1880 0 0 1 0 0 Endoplasmic reticulum 1 0.438135821136493 1 1 hPsi_site_8391 iPseU_CNN:1;iRNA_PseU:1 8392 chr11 124829896 124829896 1 + G T UCEC 124829879 + 124829859 124829899 41 AAGAGAATCAGAACGAATTATTCCAACAACAAGCCCAGGCT AAGAGAATCAGAACGAATTATTCCAACAACAAGCCCATGCT < 41bp 1 0.674897676478804 1 0.999256610870361 experiment 0.650204647042391 Functional Loss NA| CCDC15 ENSG00000149548 CDS Human protein_coding chr11:124829879 chr11:124829896 nonsynonymous SNV 0.900 0 38 hPsi_associated_SNPs_1881 0 0 0 0 1 chromatin 1 0.438710053492678 0.00148677825927801 1 hPsi_site_8392 iPseU_CNN:0.00148677825927801;iRNA_PseU:1 8393 chrX 47100999 47100999 1 + G A UCEC 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATGACTCTCAGGAACTGCTGTCATTCCTCCTGGACGGGCTG < 41bp 1 0.469433009283748 1 0.999603867530823 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47100999 synonymous SNV . 0 14 hPsi_associated_SNPs_1882 0 0 1 0 2 cytosol 1 0.469189246328196 0.000792264938354048 1 hPsi_site_8393 iPseU_CNN:0.000792264938354048;iRNA_PseU:1 8394 chr8 33346630 33346630 1 + G A UCEC 33346620 + 33346600 33346640 41 GATTCACCAAGATCACCCAATACCTAATTCGAATTAGAAAA GATTCACCAAGATCACCCAATACCTAATTCAAATTAGAAAA < 41bp 1 0.621824613005773 1 0.39730966091156 experiment 0.756350773988454 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock MAK16 ENSG00000198042 CDS Human protein_coding chr8:33346620 chr8:33346630 nonsynonymous SNV 1.000 4 31 hPsi_associated_SNPs_1884 0 0 1 0 1 Cytosol 1 0.43886317789938 1 1 hPsi_site_8394 iPseU_CNN:1;iRNA_PseU:1 8395 chr3 33883532 33883532 1 + A G UCEC 33883514 + 33883494 33883534 41 CATCCAGACTGTTGATCAGTTGATTAAAGAACTGCCTGAAT CATCCAGACTGTTGATCAGTTGATTAAAGAACTGCCTGGAT < 41bp 1 0.603047974969848 1 0.99802577495575 experiment 0.793904050060305 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33883514 chr3:33883532 nonsynonymous SNV 0.991 2 39 hPsi_associated_SNPs_1886 0 0 1 0 1 Nucleus 1 0.546215073639569 0.00394845008850009 0.907569852720862 hPsi_site_8395 iPseU_CNN:0.00394845008850009;iRNA_PseU:0.907569852720862 8396 chr4 89601364 89601364 1 + A C UCEC 89601352 + 89601332 89601372 41 TCTATGGAATGTTTACCTACTATCAAGATTCAAATCTCTTG TCTATGGAATGTTTACCTACTATCAAGATTCACATCTCTTG < 41bp 1 0.409451094938461 1 0.997697830200195 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HERC3 ENSG00000138641 CDS Human protein_coding chr4:89601352 chr4:89601364 nonsynonymous SNV 0.994 3 33 hPsi_associated_SNPs_1887 0 0 1 0 1 Ribosome 1 0.439109832068682 0.00460433959961004 1 hPsi_site_8396 iPseU_CNN:0.00460433959961004;iRNA_PseU:1 8397 chr1 1455970 1455970 1 + G A UCEC 1455956 + 1455936 1455976 41 GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGAC GCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTAACAGAC < 41bp 1 0.658775490128659 1 0.992429137229919 experiment 0.682449019742683 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1455956 chr1:1455970 synonymous SNV . 0 35 hPsi_associated_SNPs_1890 0 0 1 0 2 Ribosome 1 0.446988101619192 0.015141725540162 1 hPsi_site_8397 iPseU_CNN:0.015141725540162;iRNA_PseU:1 8398 chr2 228221828 228221828 1 + C T UCEC 228221822 + 228221802 228221842 41 TGCTTAATAGCTGGCTCTGGTTTCGCCGCTAGAGGTAACAT TGCTTAATAGCTGGCTCTGGTTTCGCTGCTAGAGGTAACAT < 41bp 1 0.113375797206777 1 0.999883890151978 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MFF ENSG00000168958 CDS Human protein_coding chr2:228221822 chr2:228221828 nonsynonymous SNV 0.998 4 27 hPsi_associated_SNPs_1891 0 0 1 0 0 Cytosol 1 0.438718592995164 0.000232219696044034 1 hPsi_site_8398 iPseU_CNN:0.000232219696044034;iRNA_PseU:1 8399 chrX 119739328 119739328 1 + G T UCEC 119739324 + 119739304 119739344 41 AACTTCAGTTATTAAGGGTATTAAGAATCAATTGATAGAGC AACTTCAGTTATTAAGGGTATTAATAATCAATTGATAGAGC < 41bp 1 0.139441291916418 1 0.62207704782486 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MCTS1 ENSG00000232119 CDS Human protein_coding chrX:119739324 chrX:119739328 nonsynonymous SNV 0.999 4 25 hPsi_associated_SNPs_1892 0 0 1 0 2 Cytosol 1 0.438736362992393 0.75584590435028 1 hPsi_site_8399 iPseU_CNN:0.75584590435028;iRNA_PseU:1 8400 chr5 126140499 126140499 1 + G A UCEC 126140512 + 126140492 126140532 41 TAATGGCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCAC TAATGGCACCCAGATCAAGCTTCGAGAATATGAAGCAGCAC < 41bp 1 0.244828628211573 1 0.998592376708984 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126140512 chr5:126140499 nonsynonymous SNV 0.999 3 8 hPsi_associated_SNPs_1893 0 0 1 0 1 Ribosome 1 0.454282358475434 0.00281524658203192 1 hPsi_site_8400 iPseU_CNN:0.00281524658203192;iRNA_PseU:1 8401 chr11 63525801 63525801 1 + T C UCEC 63525809 + 63525789 63525829 41 TTTTTTTTAATTTGGTGTTTTCTCCCATCCTTTCCCTTTAA TTTTTTTTAATTCGGTGTTTTCTCCCATCCTTTCCCTTTAA < 41bp 1 0.523911753462936 1 0.931301593780518 experiment 0.952176493074129 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RTN3 ENSG00000133318 CDS Human protein_coding chr11:63525809 chr11:63525801 nonsynonymous SNV 0.993 3 13 hPsi_associated_SNPs_1894 0 0 0 0 0 Endoplasmic reticulum 1 0.438877710955333 0.137396812438964 1 hPsi_site_8401 iPseU_CNN:0.137396812438964;iRNA_PseU:1 8402 chr6 88218809 88218809 1 + G A UCEC 88218803 + 88218783 88218823 41 ACACTTCTGTTGTGGTTAAGTACACAGACAACATCATGAAA ACACTTCTGTTGTGGTTAAGTACACAAACAACATCATGAAA < 41bp 1 0.149411186516364 1 0.992864191532135 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SLC35A1 ENSG00000164414 CDS Human protein_coding chr6:88218803 chr6:88218809 nonsynonymous SNV 1.000 3 27 hPsi_associated_SNPs_1895 0 0 1 1 2 Endoplasmic reticulum 1 0.495329985513218 0.01427161693573 1 hPsi_site_8402 iPseU_CNN:0.01427161693573;iRNA_PseU:1 8403 chr6 24503554 24503554 1 + T A UCEC 24503574 + 24503554 24503594 41 TCTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACAC ACTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACAC < 41bp 1 0.534649817920143 1 0.999882698059082 experiment 0.930700364159715 Functional Loss NA| ALDH5A1 ENSG00000112294 CDS Human protein_coding chr6:24503574 chr6:24503554 nonsynonymous SNV 0.959 2 1 hPsi_associated_SNPs_1896 0 0 1 0 1 Nucleus 1 0.848804997789221 0.000234603881835938 0.302390004421559 hPsi_site_8403 iPseU_CNN:0.000234603881835938;iRNA_PseU:0.302390004421559 8404 chr19 10369407 10369407 1 + G A UCEC 10369427 + 10369407 10369447 41 GCTGTTAGAATCACAGCGGTTCAAATCCGGCATCTGGTCGC ACTGTTAGAATCACAGCGGTTCAAATCCGGCATCTGGTCGC < 41bp 1 0.169543660234396 1 0.999978423118591 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10369427 chr19:10369407 nonsynonymous SNV 0.000 0 1 hPsi_associated_SNPs_1897 0 0 1 0 0 Cytosol 1 0.932947645275182 4.31537628180489e-05 0.134104709449635 hPsi_site_8404 iPseU_CNN:4.31537628180489e-05;iRNA_PseU:0.134104709449635 8405 chr20 37137822 37137822 1 + G T UCEC 37137815 + 37137795 37137835 41 AGAAATGGATAATGAGTGTGTTGCACAGACATGGTTTCGCT AGAAATGGATAATGAGTGTGTTGCACATACATGGTTTCGCT < 41bp 1 0.120542317729611 1 0.769899129867554 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37137815 chr20:37137822 nonsynonymous SNV 0.999 4 28 hPsi_associated_SNPs_1898 0 0 1 0 1 Nucleus 1 0.438657471330761 0.460201740264892 1 hPsi_site_8405 iPseU_CNN:0.460201740264892;iRNA_PseU:1 8406 chr8 66619399 66619399 1 + T G UCEC 66619404 + 66619384 66619424 41 CAATGCTGGAAAGACTTTGGTTAAGAACAATCCAAAGAAAC CAATGCTGGAAAGACGTTGGTTAAGAACAATCCAAAGAAAC < 41bp 1 0.221926491727081 1 0.872891962528229 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66619404 chr8:66619399 synonymous SNV . 0 16 hPsi_associated_SNPs_1899 0 0 1 0 1 Cytosol 1 0.43875522658476 0.254216074943542 1 hPsi_site_8406 iPseU_CNN:0.254216074943542;iRNA_PseU:1 8407 chr2 132276833 132276833 1 + G A UCEC 132276840 + 132276820 132276860 41 GGAGAAGGCCCTGGAGTACCTGCGCCAGATATTCCGGGTAC GGAGAAGGCCCTGAAGTACCTGCGCCAGATATTCCGGGTAC < 41bp 1 0.397813918004497 1 0.991821885108948 experiment 1 Functional Loss NA| LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132276840 chr2:132276833 . . 0 14 hPsi_associated_SNPs_1900 0 0 1 0 1 unknown 1 0.438719676548154 0.016356229782104 1 hPsi_site_8407 iPseU_CNN:0.016356229782104;iRNA_PseU:1 8408 chr19 990307 990307 1 + C T UCEC 990305 + 990285 990325 41 TCCCCATCACGGACCTGCACTGCGGCTTTGGGGGCCCCCTG TCCCCATCACGGACCTGCACTGTGGCTTTGGGGGCCCCCTG < 41bp 1 0.175179924951443 1 0.867922425270081 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control WDR18 ENSG00000065268 CDS Human protein_coding chr19:990305 chr19:990307 synonymous SNV . 0 23 hPsi_associated_SNPs_1901 0 0 1 0 1 Ribosome 1 0.468478528719262 0.264155149459838 1 hPsi_site_8408 iPseU_CNN:0.264155149459838;iRNA_PseU:1 8409 chrX 134125300 134125300 1 + C T UCEC 134125282 + 134125262 134125302 41 TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGCGG TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGTGG < 41bp 1 0.558420481311082 1 0.99987119436264 experiment 0.883159037377836 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMIM10 ENSG00000184785 CDS Human protein_coding chrX:134125282 chrX:134125300 nonsynonymous SNV 0.942 3 39 hPsi_associated_SNPs_1902 0 0 1 0 0 exosome 1 0.636744947152839 0.000257611274719904 0.726510105694323 hPsi_site_8409 iPseU_CNN:0.000257611274719904;iRNA_PseU:0.726510105694323 8410 chr10 95660700 95660700 1 + C A UCEC 95660707 + 95660687 95660727 41 GAAAAATATAGCCCTTGGGATGCTCTTTTCACCGTGTTCAC GAAAAATATAGCCATTGGGATGCTCTTTTCACCGTGTTCAC < 41bp 1 0.511495139606416 1 0.99035632610321 experiment 0.977009720787167 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660707 chr10:95660700 nonsynonymous SNV 0.997 1 14 hPsi_associated_SNPs_1903 0 0 1 0 0 exosome 1 0.438722302254538 0.01928734779358 1 hPsi_site_8410 iPseU_CNN:0.01928734779358;iRNA_PseU:1 8411 chr14 74040257 74040257 1 + T C UCEC 74040253 + 74040233 74040273 41 TGGAGACGCTCCATCTGGAGTACTTTGAAGAAGCCATGAAC TGGAGACGCTCCATCTGGAGTACTCTGAAGAAGCCATGAAC < 41bp 1 0.556280561774678 1 0.99988865852356 experiment 0.887438876450644 Functional Loss NA| ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74040253 chr14:74040257 nonsynonymous SNV 0.994 4 25 hPsi_associated_SNPs_1904 0 0 1 0 1 exosome 1 0.438696703861512 0.000222682952879971 1 hPsi_site_8411 iPseU_CNN:0.000222682952879971;iRNA_PseU:1 8412 chr7 100470814 100470814 1 + C T UCEC 100470817 + 100470797 100470837 41 TGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCTG TGTGGGCTGCTGCTCTCTTCTGAGGGCGAGTGTCAGGGCTG < 41bp 1 0.314408232556731 1 0.526567816734314 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide|26075521;GSE63655;CeU-Seq;HEK293T;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470817 chr7:100470814 synonymous SNV . 0 18 hPsi_associated_SNPs_1905 0 0 1 0 1 Ribosome 1 0.438720677789086 0.946864366531372 1 hPsi_site_8412 iPseU_CNN:0.946864366531372;iRNA_PseU:1 8413 chr15 63433623 63433623 1 + G T UCEC 63433627 + 63433607 63433647 41 ATGGTTACCAAGTTGGGCTGTTTAAGAACTCAAATGAAAAT ATGGTTACCAAGTTGGTCTGTTTAAGAACTCAAATGAAAAT < 41bp 1 0.4374372341123 1 0.999985575675964 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LACTB ENSG00000103642 CDS Human protein_coding chr15:63433627 chr15:63433623 synonymous SNV . 0 17 hPsi_associated_SNPs_1906 0 0 0 0 0 Endoplasmic reticulum 1 0.438932858925198 2.88486480719552e-05 1 hPsi_site_8413 iPseU_CNN:2.88486480719552e-05;iRNA_PseU:1 8414 chr5 72199548 72199548 1 + T G UCEC 72199553 + 72199533 72199573 41 CAGGATTTTATATTTTTTTGTGATGCCGTTGCATCATGGAT CAGGATTTTATATTTGTTTGTGATGCCGTTGCATCATGGAT < 41bp 1 0.0812178900501444 1 0.954933285713196 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72199553 chr5:72199548 nonsynonymous SNV 1.000 3 16 hPsi_associated_SNPs_1907 0 0 1 0 2 Cytosol 1 0.446899119215435 0.090133428573608 1 hPsi_site_8414 iPseU_CNN:0.090133428573608;iRNA_PseU:1 8415 chrX 134556213 134556213 1 + C T UCEC 134556195 + 134556175 134556215 41 TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGCGG TCACGCGCACGCTGCTCACCTTCTTCGACCTGGCCTGGTGG < 41bp 1 0.553340131147125 1 0.99987119436264 experiment 0.89331973770575 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SMIM10L2A ENSG00000178947 ncRNA_exonic Human protein_coding chrX:134556195 chrX:134556213 . . 0 39 hPsi_associated_SNPs_1908 0 0 0 0 0 exosome 1 0.636744947152839 0.000257611274719904 0.726510105694323 hPsi_site_8415 iPseU_CNN:0.000257611274719904;iRNA_PseU:0.726510105694323 8416 chr16 89629390 89629390 1 + C T UCEC 89629388 + 89629368 89629408 41 CCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGA CCCGTGCCAACGCCCGGCTCTTTGGCATACGGGCAAAAAGA < 41bp 1 0.423407991280082 1 0.965698778629303 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629388 chr16:89629390 synonymous SNV . 0 23 hPsi_associated_SNPs_1909 0 0 0 0 1 Cytosol 1 0.438718592949239 0.068602442741394 1 hPsi_site_8416 iPseU_CNN:0.068602442741394;iRNA_PseU:1 8417 chrX 47100989 47100989 1 + A C UCEC 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATGCCTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG < 41bp 1 0.385462332833941 1 0.97150981426239 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47100989 nonsynonymous SNV 1.000 4 4 hPsi_associated_SNPs_1910 0 0 1 0 1 cytosol 1 0.4621479671639 0.0569803714752199 1 hPsi_site_8417 iPseU_CNN:0.0569803714752199;iRNA_PseU:1 8418 chr2 54014466 54014466 1 + A G UCEC 54014448 + 54014428 54014468 41 GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACA GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGGCA < 41bp 1 0.401483063650772 1 0.924718677997589 experiment 1 Functional Loss NA| ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014448 chr2:54014466 nonsynonymous SNV 0.998 2 39 hPsi_associated_SNPs_1911 0 0 1 0 1 Endoplasmic reticulum 1 0.452825086050836 0.150562644004822 1 hPsi_site_8418 iPseU_CNN:0.150562644004822;iRNA_PseU:1 8419 chr12 102108337 102108337 1 + G T UCEC 102108355 + 102108335 102108375 41 TGGTTTTTTTTCTGCTCTTTTATTGGGATGTTTGTGTTTTA TGTTTTTTTTTCTGCTCTTTTATTGGGATGTTTGTGTTTTA < 41bp 1 0.347072336720199 1 0.915893912315369 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102108355 chr12:102108337 nonsynonymous SNV 1.000 4 3 hPsi_associated_SNPs_1912 0 0 1 0 2 Ribosome 1 0.441107247019956 0.168212175369262 1 hPsi_site_8419 iPseU_CNN:0.168212175369262;iRNA_PseU:1 8420 chr9 131339421 131339421 1 + A G UCEC 131339434 + 131339414 131339454 41 GGATGAGACTATCAGTTGGATTAAGGAAAAGGAGCAGTTAA GGATGAGGCTATCAGTTGGATTAAGGAAAAGGAGCAGTTAA < 41bp 1 0.514594793228218 1 0.996588706970215 experiment 0.970810413543564 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131339434 chr9:131339421 nonsynonymous SNV 0.997 3 8 hPsi_associated_SNPs_1913 0 0 1 0 1 Nucleus 1 0.444520894667612 0.00682258605957009 1 hPsi_site_8420 iPseU_CNN:0.00682258605957009;iRNA_PseU:1 8421 chr1 230371778 230371778 1 + G A UCEC 230371783 + 230371763 230371803 41 TCAGCGGAAGCAGTGGCGGGTGGATCTGCCGGCCACCAGCG TCAGCGGAAGCAGTGACGGGTGGATCTGCCGGCCACCAGCG < 41bp 1 0.203041170473285 1 0.999548196792603 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371783 chr1:230371778 stopgain 0.991 0 16 hPsi_associated_SNPs_1914 0 0 1 0 2 Endoplasmic reticulum 1 0.440220466347615 0.000903606414794034 1 hPsi_site_8421 iPseU_CNN:0.000903606414794034;iRNA_PseU:1 8422 chr2 54014440 54014440 1 + C T UCEC 54014448 + 54014428 54014468 41 GTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACA GTCCGGCGGCGGTCGAGCCCTTCCTCAACTCAGCGATGACA < 41bp 1 0.372154503608004 1 0.998803019523621 experiment 1 Functional Loss NA| ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014448 chr2:54014440 synonymous SNV . 0 13 hPsi_associated_SNPs_1915 0 0 1 0 1 Endoplasmic reticulum 1 0.441005257276419 0.0023939609527579 1 hPsi_site_8422 iPseU_CNN:0.0023939609527579;iRNA_PseU:1 8423 chr9 103062907 103062907 1 + C T UCEC 103062926 + 103062906 103062946 41 TCTTATAACCTGCAATCAGCTACTCAGCCAAAAAACAAAAC TTTTATAACCTGCAATCAGCTACTCAGCCAAAAAACAAAAC < 41bp 1 0.481861817197421 1 0.999609112739563 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock INVS ENSG00000119509 CDS Human protein_coding chr9:103062926 chr9:103062907 nonsynonymous SNV 0.998 4 2 hPsi_associated_SNPs_1916 0 0 1 0 1 chromatin 1 0.438747371994029 0.000781774520874023 1 hPsi_site_8423 iPseU_CNN:0.000781774520874023;iRNA_PseU:1 8424 chr17 39973401 39973401 1 + G A UCEC 39973390 + 39973370 39973410 41 GGACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGAC GGACCGAGGCCTCATGGGCATGTGTGTCAACAAGCGGCGAC < 41bp 1 0.387482211582227 1 0.999999821186066 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39973390 chr17:39973401 nonsynonymous SNV 1.000 4 32 hPsi_associated_SNPs_1917 1 0 1 0 2 Nucleus 1 0.4393485123136 3.5762786798621e-07 1 hPsi_site_8424 iPseU_CNN:3.5762786798621e-07;iRNA_PseU:1 8425 chr7 92905548 92905548 1 + T C UCEC 92905541 + 92905521 92905561 41 CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT CAACACCGTGTTTCAAGTTGTTCTTGGCTATGTGGAACTAT < 41bp 1 0.388653736638149 1 0.999404788017273 experiment 1 Functional Loss NA| VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905541 chr7:92905548 synonymous SNV . 0 28 hPsi_associated_SNPs_1918 0 0 1 0 2 Cytosol 1 0.494562255599231 0.0011904239654541 1 hPsi_site_8425 iPseU_CNN:0.0011904239654541;iRNA_PseU:1 8426 chr2 171807861 171807861 1 + C T UCEC 171807858 + 171807838 171807878 41 TCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAA TCTGAAGATCTATTCAGCCTTATTGAAACACATGAAGCAAA < 41bp 1 0.0797196860549995 1 0.402075499296188 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171807858 chr2:171807861 synonymous SNV . 0 24 hPsi_associated_SNPs_1919 0 0 1 0 1 Ribosome 1 0.528830556597286 1 0.942338886805427 hPsi_site_8426 iPseU_CNN:1;iRNA_PseU:0.942338886805427 8427 chr15 59407053 59407053 1 + G A UCEC 59407056 + 59407036 59407076 41 TCTGTACATGTGCGTTGGCATTATGGATCGATTTTTACAGG TCTGTACATGTGCGTTGACATTATGGATCGATTTTTACAGG < 41bp 1 0.0750229804565166 1 0.977215528488159 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59407056 chr15:59407053 nonsynonymous SNV 0.633 1 18 hPsi_associated_SNPs_1920 0 0 1 0 1 Ribosome 1 0.545241376227103 0.0455689430236821 0.909517247545793 hPsi_site_8427 iPseU_CNN:0.0455689430236821;iRNA_PseU:0.909517247545793 8428 chr12 102558286 102558286 1 + C A UCEC 102558298 + 102558278 102558318 41 TGACCTGGCTGTGGCTTATATTCTCAATATTCCTGATAGAG TGACCTGGATGTGGCTTATATTCTCAATATTCCTGATAGAG < 41bp 1 0.172793068146175 1 0.998294353485107 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PARPBP ENSG00000185480 CDS Human protein_coding chr12:102558298 chr12:102558286 nonsynonymous SNV 0.991 4 9 hPsi_associated_SNPs_1921 0 0 1 0 1 chromatin 1 0.43871859905685 0.00341129302978604 1 hPsi_site_8428 iPseU_CNN:0.00341129302978604;iRNA_PseU:1 8429 chr14 77929001 77929001 1 + C T UCEC 77928999 + 77928979 77929019 41 ACCCAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACAC ACCCAGATTAGTGTGAGCCTTGTCAAAGATGAGCCTGACAC < 41bp 1 0.0829390691026328 1 0.999568939208984 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928999 chr14:77929001 nonsynonymous SNV 1.000 1 23 hPsi_associated_SNPs_1922 0 0 1 0 1 Ribosome 1 0.548274934781945 0.000862121582031916 0.90345013043611 hPsi_site_8429 iPseU_CNN:0.000862121582031916;iRNA_PseU:0.90345013043611 8430 chr11 43419014 43419014 1 + C T UCEC 43419024 + 43419004 43419044 41 TCTTCACCAGCTATTACACTTTGGGGAATATATATGCAGTA TCTTCACCAGTTATTACACTTTGGGGAATATATATGCAGTA < 41bp 1 0.127013471500937 1 0.758627235889435 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TTC17 ENSG00000052841 CDS Human protein_coding chr11:43419024 chr11:43419014 synonymous SNV . 0 11 hPsi_associated_SNPs_1923 0 0 1 0 1 Nucleus 1 0.890044615785183 0.48274552822113 0.219910768429634 hPsi_site_8430 iPseU_CNN:0.48274552822113;iRNA_PseU:0.219910768429634 8431 chr8 19677892 19677892 1 + T G UCEC 19677912 + 19677892 19677932 41 TTATTTGAAACTCTTCCTGGTCGGGTCCAGTGTGAAATGTT GTATTTGAAACTCTTCCTGGTCGGGTCCAGTGTGAAATGTT < 41bp 1 0.111725619632649 1 0.990088045597076 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677912 chr8:19677892 nonsynonymous SNV 0.997 0 1 hPsi_associated_SNPs_1924 0 0 1 0 1 Cytosol 1 0.438722964556573 0.0198239088058481 1 hPsi_site_8431 iPseU_CNN:0.0198239088058481;iRNA_PseU:1 8432 chr1 10177614 10177614 1 + G A UCEC 10177621 + 10177601 10177641 41 GAACTACCTCATCGAGTGTTTCGACCGAGTTGGAATAGAGG GAACTACCTCATCAAGTGTTTCGACCGAGTTGGAATAGAGG < 41bp 1 0.0490601870675476 1 0.000471770763397217 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UBE4B ENSG00000130939 CDS Human protein_coding chr1:10177621 chr1:10177614 nonsynonymous SNV 0.999 3 14 hPsi_associated_SNPs_1925 0 0 1 0 2 Cytosol 1 0.440333688068105 1 1 hPsi_site_8432 iPseU_CNN:1;iRNA_PseU:1 8433 chrX 47101018 47101018 1 + G A UCEC 47101006 + 47100986 47101026 41 ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGGACGGGCTG ATGACTCTCAGGAGCTGCTGTCATTCCTCCTGAACGGGCTG < 41bp 1 0.111591804760457 1 0.996862351894379 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide USP11 ENSG00000102226 CDS Human protein_coding chrX:47101006 chrX:47101018 nonsynonymous SNV 0.998 4 33 hPsi_associated_SNPs_1926 0 0 1 0 2 cytosol 1 0.439084896110447 0.00627529621124201 1 hPsi_site_8433 iPseU_CNN:0.00627529621124201;iRNA_PseU:1 8434 chr2 32667478 32667478 1 + G A UCEC 32667465 + 32667445 32667485 41 ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATA ACATCGTACGTGTTTGCTTCTTTGAGGCAGGACAAAGTATA < 41bp 1 0.169386501595099 1 0.990820646286011 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32667465 chr2:32667478 nonsynonymous SNV 1.000 4 34 hPsi_associated_SNPs_1927 0 0 1 0 2 Nucleus 1 0.438718599837964 0.0183587074279781 1 hPsi_site_8434 iPseU_CNN:0.0183587074279781;iRNA_PseU:1 8435 chrX 150572177 150572177 1 + G A UCEC 150572174 + 150572154 150572194 41 TTTAATGATCACTGTTCCTATTGGGTTATATTTCACAACTA TTTAATGATCACTGTTCCTATTGAGTTATATTTCACAACTA < 41bp 1 0.161102763573195 1 0.986889719963074 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control VMA21 ENSG00000160131 CDS Human protein_coding chrX:150572174 chrX:150572177 nonsynonymous SNV 0.997 3 24 hPsi_associated_SNPs_1928 0 0 1 0 2 Ribosome 1 0.438718661381844 0.0262205600738521 1 hPsi_site_8435 iPseU_CNN:0.0262205600738521;iRNA_PseU:1 8436 chr17 16342347 16342347 1 + T A UCEC 16342354 + 16342334 16342374 41 CGCACATAAGGTGTGACCTTTTCATTCCCGTTGTTATGGAG CGCACATAAGGTGAGACCTTTTCATTCCCGTTGTTATGGAG < 41bp 1 0.384321421455035 1 0.975557863712311 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342354 chr17:16342347 . . 0 14 hPsi_associated_SNPs_1929 0 0 1 1 1 Nucleus 1 0.773516899819954 0.048884272575378 0.452966200360093 hPsi_site_8436 iPseU_CNN:0.048884272575378;iRNA_PseU:0.452966200360093 8437 chr11 4142938 4142938 1 + T C UCEC 4142942 + 4142922 4142962 41 AGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCG AGCAGCGTGCCAGAGACCTTTTCTTTGCTCTTTGGATTCCG < 41bp 1 0.433248676306923 1 0.998806715011597 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142942 chr11:4142938 synonymous SNV . 0 17 hPsi_associated_SNPs_1930 0 0 1 0 1 Nucleus 1 0.440048299162593 0.00238656997680597 1 hPsi_site_8437 iPseU_CNN:0.00238656997680597;iRNA_PseU:1 8438 chr8 59488535 59488535 1 + C T UCEC 59488553 + 59488533 59488573 41 AGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTGTGTA AGTAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTGTGTA < 41bp 1 0.270732021486033 1 0.989387094974518 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SDCBP ENSG00000137575 CDS Human protein_coding chr8:59488553 chr8:59488535 nonsynonymous SNV 1.000 3 3 hPsi_associated_SNPs_1931 0 0 1 0 3 Ribosome 1 0.489800938654985 0.0212258100509639 1 hPsi_site_8438 iPseU_CNN:0.0212258100509639;iRNA_PseU:1 8439 chr6 71566592 71566592 1 + C T UCEC 71566597 + 71566577 71566617 41 CCAGCAGCTGCAACCCTGTCTACAGTAACATCTGGGGATCT CCAGCAGCTGCAACCTTGTCTACAGTAACATCTGGGGATCT < 41bp 1 0.272737065917309 1 0.965379238128662 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71566597 chr6:71566592 synonymous SNV . 0 16 hPsi_associated_SNPs_1933 0 0 1 0 1 chromatin 1 0.438649258715545 0.069241523742676 1 hPsi_site_8439 iPseU_CNN:0.069241523742676;iRNA_PseU:1 8440 chr7 5959496 5959496 1 + G A UCEC 5959503 + 5959483 5959523 41 CTGTCCACCCAACGTTGGATTTTTGCCGAAGACTGGACAGC CTGTCCACCCAACATTGGATTTTTGCCGAAGACTGGACAGC < 41bp 1 0.255510487094766 1 0.976402163505554 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide CCZ1 ENSG00000122674 CDS Human protein_coding chr7:5959503 chr7:5959496 synonymous SNV . 0 14 hPsi_associated_SNPs_1934 0 0 0 0 1 Ribosome 1 0.440014681513827 0.047195672988892 1 hPsi_site_8440 iPseU_CNN:0.047195672988892;iRNA_PseU:1 8441 chr6 31931207 31931207 1 + A G UCEC 31931212 + 31931192 31931232 41 GGCTGAAGCGTCGTCAGATCTATGTGATTAGCACTGTAACC GGCTGAAGCGTCGTCGGATCTATGTGATTAGCACTGTAACC < 41bp 1 0.212639269366584 1 0.999971985816956 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31931212 chr6:31931207 nonsynonymous SNV 0.996 0 16 hPsi_associated_SNPs_1935 0 0 1 0 1 chromatin 1 0.440318891588579 5.6028366087979e-05 1 hPsi_site_8441 iPseU_CNN:5.6028366087979e-05;iRNA_PseU:1 8442 chr9 140137786 140137786 1 + G A UCEC 140137802 + 140137782 140137822 41 GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAG GCACAGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAG < 41bp 1 0.469336316261702 1 0.999341249465942 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137802 chr9:140137786 synonymous SNV . 0 5 hPsi_associated_SNPs_1936 0 0 0 0 0 Cytosol 1 0.438721229528835 0.0013175010681159 1 hPsi_site_8442 iPseU_CNN:0.0013175010681159;iRNA_PseU:1 8443 chr10 3154460 3154460 1 + C T UCEC 3154464 + 3154444 3154484 41 AGGAGATTTCAAGATGCGGTTCGACTCCGAGGGAGGTGAGG AGGAGATTTCAAGATGTGGTTCGACTCCGAGGGAGGTGAGG < 41bp 1 0.655073380064339 1 0.993187427520752 experiment 0.689853239871323 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PFKP ENSG00000067057 CDS Human protein_coding chr10:3154464 chr10:3154460 nonsynonymous SNV 0.003 3 17 hPsi_associated_SNPs_1938 0 0 1 0 2 Nucleus 1 0.438749875277679 0.0136251449584961 1 hPsi_site_8443 iPseU_CNN:0.0136251449584961;iRNA_PseU:1 8444 chr17 61883951 61883951 1 + C T UCEC 61883941 + 61883921 61883961 41 AGGAAGTAGCTTTGCTCATTTTGGGTTTGACGAACAACTTA AGGAAGTAGCTTTGCTCATTTTGGGTTTGATGAACAACTTA < 41bp 1 0.601597520157081 1 0.999168157577515 experiment 0.796804959685838 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control DDX42 ENSG00000198231 CDS Human protein_coding chr17:61883941 chr17:61883951 synonymous SNV . 0 31 hPsi_associated_SNPs_1939 0 0 1 0 2 chromatin 1 0.993623721995302 0.00166368484497004 0.0127525560093962 hPsi_site_8444 iPseU_CNN:0.00166368484497004;iRNA_PseU:0.0127525560093962 8445 chr17 73820438 73820438 1 + C T UCEC 73820434 + 73820414 73820454 41 ACACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGT ACACGCTGCGCTGTGTGAGCTCTGTGCTGAGGGCAGCGAGT < 41bp 1 0.494491039881264 1 0.94091784954071 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock UNK ENSG00000132478 CDS Human protein_coding chr17:73820434 chr17:73820438 synonymous SNV . 0 25 hPsi_associated_SNPs_1940 0 0 1 0 1 Cytosol 1 0.837733108165068 0.11816430091858 0.324533783669865 hPsi_site_8445 iPseU_CNN:0.11816430091858;iRNA_PseU:0.324533783669865 8446 chr7 8095112 8095112 1 + G A UCEC 8095098 + 8095078 8095118 41 AGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAG AGGCAGCAACTACAACGCAGTAAACAGAGTAGTCATCACAG < 41bp 1 0.536482243453358 1 0.99463963508606 experiment 0.927035513093284 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLCCI1 ENSG00000106415 CDS Human protein_coding chr7:8095098 chr7:8095112 nonsynonymous SNV 0.957 4 35 hPsi_associated_SNPs_1941 0 0 1 0 2 Ribosome 1 0.56328540509365 0.01072072982788 0.8734291898127 hPsi_site_8446 iPseU_CNN:0.01072072982788;iRNA_PseU:0.8734291898127 8447 chr14 39650435 39650435 1 + G T UCEC 39650439 + 39650419 39650459 41 TGAGGATTTGTCATTAGCTGTTTTACAGCCAACACCCCAAG TGAGGATTTGTCATTATCTGTTTTACAGCCAACACCCCAAG < 41bp 1 0.434111643851101 1 0.998637855052948 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide PNN ENSG00000100941 CDS Human protein_coding chr14:39650439 chr14:39650435 nonsynonymous SNV 0.980 0 17 hPsi_associated_SNPs_1942 0 0 1 0 0 Nucleus 1 0.445064296180604 0.002724289894104 1 hPsi_site_8447 iPseU_CNN:0.002724289894104;iRNA_PseU:1 8448 chrX 123211808 123211808 1 + A G UCEC 123211815 + 123211795 123211835 41 ATTTCTTTATAGTATTATAATGACTATGGAGATATCATCAA ATTTCTTTATAGTGTTATAATGACTATGGAGATATCATCAA < 41bp 1 0.131374584582978 1 0.915409684181213 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide STAG2 ENSG00000101972 CDS Human protein_coding chrX:123211815 chrX:123211808 nonsynonymous SNV 1.000 3 14 hPsi_associated_SNPs_1943 0 0 1 0 1 Nucleus 1 0.439865774263192 0.169180631637574 1 hPsi_site_8448 iPseU_CNN:0.169180631637574;iRNA_PseU:1 8449 chr12 104732938 104732938 1 + G A UCEC 104732933 + 104732913 104732953 41 TTAGGAACGTGTTGTGGGCTTTCACGTACTGGGTCCAAATG TTAGGAACGTGTTGTGGGCTTTCACATACTGGGTCCAAATG < 41bp 1 0.631886970626419 1 0.999296844005585 experiment 0.736226058747162 Functional Loss NA| TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732933 chr12:104732938 nonsynonymous SNV 0.999 1 26 hPsi_associated_SNPs_1944 0 0 1 1 1 Ribosome 1 0.969427693336202 0.0014063119888299 0.061144613327595 hPsi_site_8449 iPseU_CNN:0.0014063119888299;iRNA_PseU:0.061144613327595 8450 chrX 100387234 100387234 1 + G A UCEC 100387237 + 100387217 100387257 41 CCTTCCTCTCTGGGATGGCCTTTGTTGTCGGTCACAGTTCC CCTTCCTCTCTGGGATGACCTTTGTTGTCGGTCACAGTTCC < 41bp 1 0.545178221270005 1 0.971526384353638 experiment 0.90964355745999 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CENPI ENSG00000102384 CDS Human protein_coding chrX:100387237 chrX:100387234 nonsynonymous SNV 0.890 4 18 hPsi_associated_SNPs_1945 0 0 0 0 2 Nucleus 1 0.438706122074203 0.0569472312927239 1 hPsi_site_8450 iPseU_CNN:0.0569472312927239;iRNA_PseU:1 8451 chr1 172559042 172559042 1 + G A UCEC 172559048 + 172559028 172559068 41 GTCTCTCAGTGGTCGCTATCTGGAGGAGCTTAGCCAAAGGT GTCTCTCAGTGGTCACTATCTGGAGGAGCTTAGCCAAAGGT < 41bp 1 0.102083159788197 1 0.999989688396454 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock SUCO ENSG00000094975 CDS Human protein_coding chr1:172559048 chr1:172559042 nonsynonymous SNV 0.998 4 15 hPsi_associated_SNPs_1948 0 0 1 0 1 Ribosome 1 0.466567667379928 2.06232070920631e-05 1 hPsi_site_8451 iPseU_CNN:2.06232070920631e-05;iRNA_PseU:1 8452 chr5 157161639 157161639 1 + C T UCEC 157161649 + 157161629 157161669 41 GTTTTATTGGCGGGATTACTTTGAGGACCAGCCCCTTCTGT GTTTTATTGGTGGGATTACTTTGAGGACCAGCCCCTTCTGT < 41bp 1 0.303836924298664 1 0.985436677932739 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control THG1L ENSG00000113272;ENSG00000268432 CDS Human other chr5:157161649 chr5:157161639 nonsynonymous SNV 1.000 3 11 hPsi_associated_SNPs_1949 0 0 1 0 1 Nucleus 1 0.438718752019358 0.0291266441345219 1 hPsi_site_8452 iPseU_CNN:0.0291266441345219;iRNA_PseU:1 8453 chr1 92769569 92769569 1 + C T UCEC 92769587 + 92769567 92769607 41 GTCGTGGATGAACGTTCTATTGTCAAACTCTGTGGTTATCC GTTGTGGATGAACGTTCTATTGTCAAACTCTGTGGTTATCC < 41bp 1 0.676575410067662 1 0.99947190284729 experiment 0.646849179864676 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769587 chr1:92769569 synonymous SNV . 0 3 hPsi_associated_SNPs_1950 0 0 1 0 2 Cytosol 1 0.598937153429173 0.00105619430541992 0.802125693141654 hPsi_site_8453 iPseU_CNN:0.00105619430541992;iRNA_PseU:0.802125693141654 8454 chr19 14561806 14561806 1 + G A UCEC 14561814 + 14561794 14561834 41 CCACCCCAAGGGGCGGCTGCTGCGAGAAGAGCTCGCTGCGG CCACCCCAAGGGACGGCTGCTGCGAGAAGAGCTCGCTGCGG < 41bp 1 0.218736661825473 1 0.995358526706696 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561814 chr19:14561806 synonymous SNV . 0 13 hPsi_associated_SNPs_1951 0 0 1 0 1 Ribosome 1 0.460358282622421 0.009282946586608 1 hPsi_site_8454 iPseU_CNN:0.009282946586608;iRNA_PseU:1 8455 chrX 100402954 100402954 1 + G A UCEC 100402974 + 100402954 100402994 41 GCAGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA ACAGCAAGACTTATCAAGAATTTAATCACTATTTGACATCA < 41bp 1 0.504036807665479 1 0.998882353305817 experiment 0.991926384669042 Functional Loss NA| CENPI ENSG00000102384 CDS Human protein_coding chrX:100402974 chrX:100402954 nonsynonymous SNV 1.000 2 1 hPsi_associated_SNPs_1952 0 0 1 0 1 Nucleus 1 0.912335150850768 0.00223529338836603 0.175329698298464 hPsi_site_8455 iPseU_CNN:0.00223529338836603;iRNA_PseU:0.175329698298464 8456 chr3 127783744 127783744 1 + T C UCEC 127783739 + 127783719 127783759 41 GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCT GGAATGGAATTTGAAGGTGCTATCACCGCACTTTTCCATCT < 41bp 1 0.662843043472763 1 0.996330916881561 experiment 0.674313913054473 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127783739 chr3:127783744 nonsynonymous SNV 0.115 2 26 hPsi_associated_SNPs_1953 0 0 1 0 2 Ribosome 1 0.440000825892758 0.00733816623687811 1 hPsi_site_8456 iPseU_CNN:0.00733816623687811;iRNA_PseU:1 8457 chr1 107599773 107599773 1 + C T UCEC 107599756 + 107599736 107599776 41 GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGCCGG GCACGTCCTGCCGGGACCAGTGGAGACTGTAGAGTTGTCGG < 41bp 1 0.0704399692771548 1 0.998816013336182 experiment 1 Functional Loss NA| PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599756 chr1:107599773 nonsynonymous SNV 0.980 2 38 hPsi_associated_SNPs_1954 0 0 1 0 0 Ribosome 1 0.440028018432121 0.00236797332763605 1 hPsi_site_8457 iPseU_CNN:0.00236797332763605;iRNA_PseU:1 8458 chr10 51580648 51580648 1 + T A UCEC 51580653 + 51580633 51580673 41 GGTGGACCTTATTTATCAGCTTAAAGAGGAGACACTTCAAC GGTGGACCTTATTTAACAGCTTAAAGAGGAGACACTTCAAC < 41bp 1 0.309285856471111 1 0.999315500259399 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide NCOA4 ENSG00000138293 CDS Human other chr10:51580653 chr10:51580648 stopgain . 0 16 hPsi_associated_SNPs_1955 0 0 1 0 2 Cytosol 1 0.438720088925311 0.00136899948120206 1 hPsi_site_8458 iPseU_CNN:0.00136899948120206;iRNA_PseU:1 8459 chr4 99273745 99273745 1 + C T UCEC 99273729 + 99273709 99273749 41 GCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTACGATA GCTTCAAACGGGCAGGGCTCTAGGAAACATATGTTATGATA < 41bp 1 0.164646471525698 1 0.961213290691376 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAP1GDS1 ENSG00000138698 CDS Human protein_coding chr4:99273729 chr4:99273745 synonymous SNV . 0 37 hPsi_associated_SNPs_1956 0 0 1 0 1 Ribosome 1 0.89636752013699 0.0775734186172481 0.20726495972602 hPsi_site_8459 iPseU_CNN:0.0775734186172481;iRNA_PseU:0.20726495972602 8460 chr7 90014300 90014300 1 + C T UCEC 90014285 + 90014265 90014305 41 ATCATCCCCATATCTGCAGTTACTGGAGAAGGAATCGAAGA ATCATCCCCATATCTGCAGTTACTGGAGAAGGAATTGAAGA < 41bp 1 0.490087044503221 1 0.994973242282867 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:90014285 chr7:90014300 synonymous SNV . 0 36 hPsi_associated_SNPs_1957 0 0 1 0 1 chromatin 1 0.663023338944457 0.010053515434266 0.673953322111087 hPsi_site_8460 iPseU_CNN:0.010053515434266;iRNA_PseU:0.673953322111087 8461 chr18 73000343 73000343 1 + G A UCEC 73000352 + 73000332 73000372 41 GACACACTTGGGCTTCAGCCTGAAGGATCTCTCCAAGCTGC GACACACTTGGACTTCAGCCTGAAGGATCTCTCCAAGCTGC < 41bp 1 0.135492329663278 1 0.999447882175446 experiment 1 Functional Loss NA| TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:73000352 chr18:73000343 nonsynonymous SNV 0.997 4 12 hPsi_associated_SNPs_1958 0 0 1 0 0 Cytosol 1 0.450222373435064 0.001104235649108 1 hPsi_site_8461 iPseU_CNN:0.001104235649108;iRNA_PseU:1 8462 chrX 48681765 48681765 1 + G T UCEC 48681763 + 48681743 48681783 41 GACTACCTCAGAGGAGGCTGTAGGAGGAGCTACACTGGCCC GACTACCTCAGAGGAGGCTGTATGAGGAGCTACACTGGCCC < 41bp 1 0.591973309300375 1 0.998612999916077 experiment 0.816053381399249 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681763 chrX:48681765 stopgain 0.008 0 23 hPsi_associated_SNPs_1959 0 0 1 0 0 Cytosol 1 0.438742058020242 0.00277400016784601 1 hPsi_site_8462 iPseU_CNN:0.00277400016784601;iRNA_PseU:1 8463 chr22 20759843 20759843 1 + G A UCEC 20759850 + 20759830 20759870 41 CATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTCAGGT CATGGTCTGGGACATCCCTGTAGAGGAATTCCCCCTCAGGT < 41bp 1 0.361408548237552 1 0.99840384721756 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20759850 chr22:20759843 nonsynonymous SNV 0.000 0 14 hPsi_associated_SNPs_1960 0 0 1 0 0 Cytosol 1 0.438744348908926 0.00319230556487993 1 hPsi_site_8463 iPseU_CNN:0.00319230556487993;iRNA_PseU:1 8464 chr17 37357530 37357530 1 + T G UCEC 37357531 + 37357511 37357551 41 TGGCAAGAAGAAGGTCTGGTTAGACCCCAATGAGACCAATG TGGCAAGAAGAAGGTCTGGGTAGACCCCAATGAGACCAATG < 41bp 1 0.51146569759662 1 0.829094111919403 experiment 0.97706860480676 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357531 chr17:37357530 nonsynonymous SNV 1.000 2 20 hPsi_associated_SNPs_1961 0 0 1 0 2 chromatin 1 0.438718693047453 0.341811776161194 1 hPsi_site_8464 iPseU_CNN:0.341811776161194;iRNA_PseU:1 8465 chr4 160275011 160275011 1 + G A UCEC 160275023 + 160275003 160275043 41 AGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAGACTCAGA AGCTGGGCATCTTCCACAGGTTACTGGGGAGAAGACTCAGA < 41bp 1 0.393461283270163 1 0.477417141199112 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160275023 chr4:160275011 synonymous SNV . 0 9 hPsi_associated_SNPs_1962 0 0 1 0 0 Cytosol 1 0.64564528318953 1 0.70870943362094 hPsi_site_8465 iPseU_CNN:1;iRNA_PseU:0.70870943362094 8466 chr12 101683948 101683948 1 + T C UCEC 101683941 + 101683921 101683961 41 GATAAAAACGCACTTTTCAATTTAATGTTTCTTGATCTTGA GATAAAAACGCACTTTTCAATTTAATGCTTCTTGATCTTGA < 41bp 1 0.410769163904405 1 0.995810687541962 experiment 1 Functional Loss NA| UTP20 ENSG00000120800 CDS Human protein_coding chr12:101683941 chr12:101683948 nonsynonymous SNV 1.000 3 28 hPsi_associated_SNPs_1963 0 0 1 0 1 Cytosol 1 0.468676959164551 0.00837862491607599 1 hPsi_site_8466 iPseU_CNN:0.00837862491607599;iRNA_PseU:1 8467 chr2 128913100 128913100 1 + C A UCEC 128913094 + 128913074 128913114 41 GTGGATGATTATGCTAGATTTACTATCTTGGATTCCCAAGG GTGGATGATTATGCTAGATTTACTATATTGGATTCCCAAGG < 41bp 1 0.46064872611886 1 0.0922412574291229 experiment 1 Functional Loss NA| UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128913094 chr2:128913100 synonymous SNV . 0 27 hPsi_associated_SNPs_1964 0 0 1 0 2 Nucleus 1 0.438718592995102 1 1 hPsi_site_8467 iPseU_CNN:1;iRNA_PseU:1 8468 chr17 42266532 42266532 1 + G T UCEC 42266527 + 42266507 42266547 41 AGCTTGGCTCTCTACCTACGTAGCAGACAGCGGTAGCAACC AGCTTGGCTCTCTACCTACGTAGCATACAGCGGTAGCAACC < 41bp 1 0.410286807341749 1 1 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266527 chr17:42266532 nonsynonymous SNV 0.999 4 26 hPsi_associated_SNPs_1965 0 0 1 0 0 Endoplasmic reticulum 1 0.43871859299506 0 1 hPsi_site_8468 iPseU_CNN:0;iRNA_PseU:1 8469 chr22 50954920 50954920 1 + G T UCEC 50954940 + 50954920 50954960 41 GAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCT TAACTTCATTGAGGCAGCGTTGTTGATCCAGGGCTCTGCCT < 41bp 1 0.260416741894356 1 0.990944147109985 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50954940 chr22:50954920 nonsynonymous SNV 1.000 4 1 hPsi_associated_SNPs_1966 0 0 1 0 2 Cytosol 1 0.438618498729135 0.01811170578003 1 hPsi_site_8469 iPseU_CNN:0.01811170578003;iRNA_PseU:1 8470 chr3 33883522 33883522 1 + G T UCEC 33883514 + 33883494 33883534 41 CATCCAGACTGTTGATCAGTTGATTAAAGAACTGCCTGAAT CATCCAGACTGTTGATCAGTTGATTAAATAACTGCCTGAAT < 41bp 1 0.285368523405736 1 0.555451512336731 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33883514 chr3:33883522 stopgain 0.994 1 29 hPsi_associated_SNPs_1967 0 0 1 0 1 Nucleus 1 0.439244070820431 0.889096975326538 1 hPsi_site_8470 iPseU_CNN:0.889096975326538;iRNA_PseU:1 8471 chr14 45542737 45542737 1 + C T UCEC 45542732 + 45542712 45542752 41 TCAAAAAGAGTTTGGAGGAATTACTCGATATGACAATTTTA TCAAAAAGAGTTTGGAGGAATTACTTGATATGACAATTTTA < 41bp 1 0.100526883021156 1 0.932273268699646 experiment 1 Functional Loss NA| TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45542732 chr14:45542737 synonymous SNV . 0 26 hPsi_associated_SNPs_1968 0 0 0 0 0 unknown 1 0.439464579645421 0.135453462600708 1 hPsi_site_8471 iPseU_CNN:0.135453462600708;iRNA_PseU:1 8472 chr7 8095093 8095093 1 + C T UCEC 8095098 + 8095078 8095118 41 AGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAG AGGCAGCAACTACAATGCAGTAAACAGAGTAGTCGTCACAG < 41bp 1 0.291155064614434 1 0.999976277351379 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock GLCCI1 ENSG00000106415 CDS Human protein_coding chr7:8095098 chr7:8095093 nonsynonymous SNV 0.860 4 16 hPsi_associated_SNPs_1969 0 0 1 0 2 Ribosome 1 0.966385389798147 4.74452972420991e-05 0.0672292204037059 hPsi_site_8472 iPseU_CNN:4.74452972420991e-05;iRNA_PseU:0.0672292204037059 8473 chr16 90002008 90002008 1 + G T UCEC 90001991 + 90001971 90002011 41 GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAG GCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGATCAG < 41bp 1 0.502714433305079 1 0.999926090240479 experiment 0.994571133389841 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001991 chr16:90002008 nonsynonymous SNV 1.000 3 38 hPsi_associated_SNPs_1970 0 0 0 0 0 chromatin 1 0.475004287360733 0.000147819519042081 1 hPsi_site_8473 iPseU_CNN:0.000147819519042081;iRNA_PseU:1 8474 chr15 75631359 75631359 1 + T C UCEC 75631364 + 75631344 75631384 41 CCACAGTGGCAGTGCTGAGTTTCATCCTCTCCAGTGCGGCC CCACAGTGGCAGTGCCGAGTTTCATCCTCTCCAGTGCGGCC < 41bp 1 0.560097132109419 1 0.999931454658508 experiment 0.879805735781163 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control COMMD4 ENSG00000140365 CDS Human protein_coding chr15:75631364 chr15:75631359 nonsynonymous SNV 0.990 4 16 hPsi_associated_SNPs_1971 0 0 1 1 2 Ribosome 1 0.438857256303845 0.000137090682984065 1 hPsi_site_8474 iPseU_CNN:0.000137090682984065;iRNA_PseU:1 8475 chr7 105187511 105187511 1 + C A UCEC 105187492 + 105187472 105187512 41 GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAAAATTCT GGTTTCATGAGAGCCACAGTTAAATTCTGGCATAAAATTAT < 41bp 1 0.471737005752098 1 0.999999523162842 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control RINT1 ENSG00000135249 CDS Human protein_coding chr7:105187492 chr7:105187511 nonsynonymous SNV 1.000 1 40 hPsi_associated_SNPs_1972 0 0 1 0 1 Nucleus 1 0.441784591747243 9.53674315962161e-07 1 hPsi_site_8475 iPseU_CNN:9.53674315962161e-07;iRNA_PseU:1 8476 chr11 68369357 68369357 1 + C A UCS 68369352 + 68369332 68369372 41 ACAAAAGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGA ACAAAAGATTCTTTAAGGAGTAATTATCCAGTGGAAATGGA < 41bp 1 0.335030486849123 1 0.518550634384155 experiment 1 Functional Loss NA| PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369352 chr11:68369357 nonsynonymous SNV 0.991 4 26 hPsi_associated_SNPs_1973 0 0 1 0 2 Nucleus 1 0.438718591262004 0.96289873123169 1 hPsi_site_8476 iPseU_CNN:0.96289873123169;iRNA_PseU:1 8477 chr3 93813928 93813928 1 + G A UCS 93813948 + 93813928 93813968 41 GACTCTCAGAAGGCATCCTGTAGGATAAGTCAAAGGAGGAA AACTCTCAGAAGGCATCCTGTAGGATAAGTCAAAGGAGGAA < 41bp 1 0.201480338378487 1 0.996161937713623 experiment 1 Functional Loss NA| NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93813948 chr3:93813928 nonsynonymous SNV 0.898 1 1 hPsi_associated_SNPs_1974 0 0 1 0 2 chromatin 1 0.438719272778318 0.00767612457275391 1 hPsi_site_8477 iPseU_CNN:0.00767612457275391;iRNA_PseU:1 8478 chr17 42266526 42266526 1 + G A UCS 42266527 + 42266507 42266547 41 AGCTTGGCTCTCTACCTACGTAGCAGACAGCGGTAGCAACC AGCTTGGCTCTCTACCTACATAGCAGACAGCGGTAGCAACC < 41bp 1 0.241669855652587 1 0.999001979827881 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Heat_shock TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266527 chr17:42266526 nonsynonymous SNV 0.994 4 20 hPsi_associated_SNPs_1975 0 0 1 0 0 Endoplasmic reticulum 1 0.438732095425419 0.00199604034423806 1 hPsi_site_8478 iPseU_CNN:0.00199604034423806;iRNA_PseU:1 8479 chr7 92905543 92905543 1 + C T UCS 92905541 + 92905521 92905561 41 CAACACCGTGTTTCAAGTTGTTCTTGGTTATGTGGAACTAT CAACACCGTGTTTCAAGTTGTTTTTGGTTATGTGGAACTAT < 41bp 1 0.2718920612752 1 0.997429490089417 experiment 1 Functional Loss NA| VPS50 ENSG00000004766 CDS Human protein_coding chr7:92905541 chr7:92905543 nonsynonymous SNV 0.999 3 23 hPsi_associated_SNPs_1976 0 0 1 0 2 Cytosol 1 0.439374441163556 0.0051410198211661 1 hPsi_site_8479 iPseU_CNN:0.0051410198211661;iRNA_PseU:1 8480 chr1 230371780 230371780 1 + G A UVM 230371783 + 230371763 230371803 41 TCAGCGGAAGCAGTGGCGGGTGGATCTGCCGGCCACCAGCG TCAGCGGAAGCAGTGGCAGGTGGATCTGCCGGCCACCAGCG < 41bp 1 0.363038989496471 1 0.990747690200806 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371783 chr1:230371780 nonsynonymous SNV 0.970 0 18 hPsi_associated_SNPs_1977 0 0 1 0 2 Endoplasmic reticulum 1 0.438736073061498 0.018504619598388 1 hPsi_site_8480 iPseU_CNN:0.018504619598388;iRNA_PseU:1 8481 chr2 207655391 207655391 1 + T C LAML 207655397 + 207655377 207655417 41 GCATTTGAATGCAATGGGTTTTCATGTGATCTTGGTGAGAA GCATTTGAATGCAACGGGTTTTCATGTGATCTTGGTGAGAA < 41bp 1 0.456308712339229 1 0.975119113922119 experiment 1 Functional Loss NA| FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207655397 chr2:207655391 nonsynonymous SNV 0.997 2 15 hPsi_associated_SNPs_1978 0 0 1 0 2 Nucleus 1 0.439546103589681 0.0497617721557619 1 hPsi_site_8481 iPseU_CNN:0.0497617721557619;iRNA_PseU:1 8482 chr2 27446494 27446494 1 + A T LAML 27446486 + 27446466 27446506 41 TGGTGGGCTCTGGGCGCTGCTTTCTGACATCCCAGAACCAT TGGTGGGCTCTGGGCGCTGCTTTCTGACTTCCCAGAACCAT < 41bp 1 0.301759975125983 1 0.996803402900696 experiment 1 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27446486 chr2:27446494 synonymous SNV . 0 29 hPsi_associated_SNPs_1979 0 0 1 0 1 Exosome 1 0.784724519410333 0.00639319419860795 0.430550961179334 hPsi_site_8482 iPseU_CNN:0.00639319419860795;iRNA_PseU:0.430550961179334 8483 chr5 170818362 170818362 1 + A G LAML 170818349 + 170818329 170818369 41 AAAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATT AAAGGATGAGTTGCACATTGTTGAAGCAGAGGCGATGAATT < 41bp 1 0.689198914227554 1 0.973804712295532 experiment 0.621602171544891 Functional Loss 26075521;GSE63655;CeU-Seq;HEK293T;Control|30872485;GSE90963;RBS-Seq;HeLa;Control NPM1 ENSG00000181163 CDS Human protein_coding chr5:170818349 chr5:170818362 synonymous SNV . 0 34 hPsi_associated_SNPs_1980 0 0 1 0 2 Ribosome 1 0.441396653406928 0.052390575408936 1 hPsi_site_8483 iPseU_CNN:0.052390575408936;iRNA_PseU:1 8484 chr5 10400929 10400929 1 + T A LAML 10400938 + 10400918 10400958 41 TCATTTCTCCCTTGTTGGTTTGGGATTTGAAGAACACGTGA TCATTTCTCCCATGTTGGTTTGGGATTTGAAGAACACGTGA < 41bp 1 0.478880446563199 1 0.955045759677887 experiment 1 Functional Loss 25219674;GSE60047;Ψ-seq;HEK293;Control|26075521;GSE63655;CeU-Seq;HEK293T;hydrogen peroxide MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10400938 chr5:10400929 nonsynonymous SNV 1.000 2 12 hPsi_associated_SNPs_1981 0 0 1 0 2 Nucleus 1 0.932976847019436 0.0899084806442261 0.134046305961128 hPsi_site_8484 iPseU_CNN:0.0899084806442261;iRNA_PseU:0.134046305961128 8485 chr16 31195601 31195601 1 + A G LGG 31195600 + 31195580 31195620 41 GCTACAGCCAGCAGCCTAGCTATGGTGGACAGCAGCAAAGC GCTACAGCCAGCAGCCTAGCTGTGGTGGACAGCAGCAAAGC < 41bp 0.880676089881694 0.504193473213695 0.31555122 0.23803234 prediction 0.752965233335999 Functional Loss - FUS ENSG00000089280 CDS Human protein_coding chr16:31195600 chr16:31195601 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_3068 0 0 1 0 1 Cytosol 0.438036652822515 0.438800283672689 0 0 hPsi_site_8485 iPseU_CNN:0;iRNA_PseU:0 8486 chr20 39792414 39792414 1 + A G UCEC 39792413 + 39792393 39792433 41 GAACTCGCAGCTGGATGCAGTATGCCCGGACACCATGAACA GAACTCGCAGCTGGATGCAGTGTGCCCGGACACCATGAACA < 41bp 0.880279870447653 0.504434319753421 0.6736665 0.43398 prediction 0.751691101388463 Functional Loss - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39792413 chr20:39792414 synonymous SNV . 0 22 hPsi_associated_SNPs_3069 0 0 1 0 2 Cytosol 0.438716248020352 0.438730913503856 0.347333 0 hPsi_site_8486 iPseU_CNN:0.347333;iRNA_PseU:0 8487 chr10 106035050 106035050 1 + A G UCEC 106035049 + 106035029 106035069 41 ACAGCATGAGGTTCTGCCCCTATTCTCACAGGACCCGCCTC ACAGCATGAGGTTCTGCCCCTGTTCTCACAGGACCCGCCTC < 41bp 0.875684910850654 0.498415951222563 0.5449275 0.32369184 prediction 0.751369821701309 Functional Loss - GSTO2 ENSG00000065621 CDS Human protein_coding chr10:106035049 chr10:106035050 nonsynonymous SNV 0.540 1 22 hPsi_associated_SNPs_3070 0 0 1 0 2 Cytosol 0.438716379306384 0.438716018716177 0.089855 0 hPsi_site_8487 iPseU_CNN:0.089855;iRNA_PseU:0 8488 chr17 9559806 9559806 1 + A G KIRC 9559805 + 9559785 9559825 41 GCTCTGGTTGCTGGATCGTGTACATGAGGACCTGGAGGGTT GCTCTGGTTGCTGGATCGTGTGCATGAGGACCTGGAGGGTT < 41bp 0.879389753902378 0.503780133079578 0.7630583 0.48748842 prediction 0.751219241645601 Functional Loss - USP43 ENSG00000154914 CDS Human protein_coding chr17:9559805 chr17:9559806 synonymous SNV . 0 22 hPsi_associated_SNPs_3071 0 0 0 0 1 cytosol 0.438715409837244 0.438718378448621 0.5261166 0 hPsi_site_8488 iPseU_CNN:0.5261166;iRNA_PseU:0 8489 chr1 12262054 12262054 1 + A G CESC 12262053 + 12262033 12262073 41 CCTGCCGATAAGGCCCGGGGTACACAGGGCCCCGAGCAGCA CCTGCCGATAAGGCCCGGGGTGCACAGGGCCCCGAGCAGCA < 41bp 0.878890643298548 0.503468690839783 0.38804966 0.19168034 prediction 0.750843904917531 Functional Loss - TNFRSF1B ENSG00000028137 CDS Human protein_coding chr1:12262053 chr1:12262054 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_3072 0 0 0 0 1 Ribosome 0.438718589753404 0.438718592957825 0 0 hPsi_site_8489 iPseU_CNN:0;iRNA_PseU:0 8490 chr16 31382697 31382697 1 + A G LUSC 31382696 + 31382676 31382716 41 GGGGGTGAGCATGCAGTTCATACCTGCCGAGATCCCCAGGT GGGGGTGAGCATGCAGTTCATGCCTGCCGAGATCCCCAGGT < 41bp 0.8749160336147 0.497673901955372 0.62756896 0.31940314 prediction 0.749832067229399 Functional Loss - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31382696 chr16:31382697 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_3073 0 0 0 0 1 Nucleus 0.438716102312218 0.438718537943997 0.25513792 0 hPsi_site_8490 iPseU_CNN:0.25513792;iRNA_PseU:0 8491 chr14 65208466 65208466 1 + A G UCEC 65208465 + 65208445 65208485 41 GTCGCCGGGAGAGCCTCTCCTACATCCCCAAAGGACTGGTA GTCGCCGGGAGAGCCTCTCCTGCATCCCCAAAGGACTGGTA < 41bp 0.874167223670239 0.497775911377666 0.51052314 0.25906074 prediction 0.748334447340478 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65208465 chr14:65208466 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3074 0 0 0 0 0 Nucleus 0.438795002306412 0.438724422293948 0.02104628 0 hPsi_site_8491 iPseU_CNN:0.02104628;iRNA_PseU:0 8492 chr2 112779055 112779055 1 + A G BLCA 112779054 + 112779034 112779074 41 TCGGCCTCTCTAAGAAGATTTACAGTGGCGATTATTACCGC TCGGCCTCTCTAAGAAGATTTGCAGTGGCGATTATTACCGC < 41bp 0.873925718241138 0.496839385124105 0.3933571 0.3164817 prediction 0.747851436482277 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112779054 chr2:112779055 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3075 0 0 1 0 1 Endoplasmic reticulum 0.438718592988282 0.438718592834611 0 0 hPsi_site_8492 iPseU_CNN:0;iRNA_PseU:0 8493 chr3 184025708 184025708 1 + A G COAD 184025707 + 184025687 184025727 41 CATTTAGGGAAGGGCACCCTTACCCTCTGCCCCTACCACAG CATTTAGGGAAGGGCACCCTTGCCCTCTGCCCCTACCACAG < 41bp 0.873880305006449 0.489512415288797 0.31421173 0.20050764 prediction 0.747760610012897 Functional Loss - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184025707 chr3:184025708 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_3076 0 0 1 0 2 Ribosome 0.43871859299506 0.438718592995101 0 0 hPsi_site_8493 iPseU_CNN:0;iRNA_PseU:0 8494 chr11 8118874 8118874 1 + A G rs143280502 8118873 + 8118853 8118893 41 CTGAGGCCGGCCCCCCAGGGTATCACCATCAAATGCCGCAT CTGAGGCCGGCCCCCCAGGGTGTCACCATCAAATGCCGCAT < 41bp 0.883516230668492 0.510084656209055 0.39758003 0.26061323 prediction 0.746863148918874 Functional Loss - TUB ENSG00000166402 CDS Human protein_coding chr11:8118873 chr11:8118874 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3077 0 0 0 0 2 nucleus 0.438718595646653 0.438718593362806 0 0 hPsi_site_8494 iPseU_CNN:0;iRNA_PseU:0 8495 chr5 176517988 176517988 1 + A G UCEC 176517987 + 176517967 176518007 41 GGAGAAGAAACTGCATGCAGTACCTGCGGGGAACACCGTCA GGAGAAGAAACTGCATGCAGTGCCTGCGGGGAACACCGTCA < 41bp 0.873326648713581 0.497959055760994 0.66381943 0.23993126 prediction 0.746653297427162 Functional Loss - FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176517987 chr5:176517988 synonymous SNV . 0 22 hPsi_associated_SNPs_3078 0 0 1 1 1 Endoplasmic reticulum 0.438718557871844 0.438718554870658 0.32763886 0 hPsi_site_8495 iPseU_CNN:0.32763886;iRNA_PseU:0 8496 chr11 63667458 63667458 1 + A G STAD 63667457 + 63667437 63667477 41 CCTTCTGTGGCAGTCCCCCTTATGCTGCCCCAGAACTCTTC CCTTCTGTGGCAGTCCCCCTTGTGCTGCCCCAGAACTCTTC < 41bp 0.87858976768327 0.50559581414391 0.5936924 0.4724231 prediction 0.745987907078719 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63667457 chr11:63667458 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3079 0 0 1 0 0 Nucleus 0.438772703434025 0.438734820643848 0.1873848 0 hPsi_site_8496 iPseU_CNN:0.1873848;iRNA_PseU:0 8497 chr1 38027251 38027251 1 + A G OV 38027250 + 38027230 38027270 41 TCCGCATGACCATCGCTGCCTACCAGACCCTGTACGAGAGC TCCGCATGACCATCGCTGCCTGCCAGACCCTGTACGAGAGC < 41bp 0.872706218501859 0.497015759279926 0.91245973 0.45941594 prediction 0.745412437003718 Functional Loss - DNALI1 ENSG00000163879 CDS Human protein_coding chr1:38027250 chr1:38027251 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3080 0 0 0 1 2 Cytosol 0.43384482630429 0.432335642728778 0.82491946 0 hPsi_site_8497 iPseU_CNN:0.82491946;iRNA_PseU:0 8498 chrX 47426642 47426642 1 + A G UCEC 47426641 + 47426621 47426661 41 GCCCACAGAAGAACCTGGGGTACCGGGACTCAGGCTATTAC GCCCACAGAAGAACCTGGGGTGCCGGGACTCAGGCTATTAC < 41bp 0.876856135412814 0.504193533114064 0.2104058 0.101474226 prediction 0.745325204597501 Functional Loss - ARAF ENSG00000078061 CDS Human protein_coding chrX:47426641 chrX:47426642 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3081 0 0 1 0 1 Cytosol 0.438717814381214 0.438718262978153 0 0 hPsi_site_8498 iPseU_CNN:0;iRNA_PseU:0 8499 chr14 62204914 62204914 1 + A G LGG 62204913 + 62204893 62204933 41 AAATTTGGCAATGTCTCCATTACCCACCGCTGAAACGCCAA AAATTTGGCAATGTCTCCATTGCCCACCGCTGAAACGCCAA < 41bp 0.873278199696946 0.50078210598136 0.547642 0.2914937 prediction 0.744992187431173 Functional Loss - HIF1A ENSG00000100644 CDS Human protein_coding chr14:62204913 chr14:62204914 synonymous SNV . 0 22 hPsi_associated_SNPs_3082 0 0 1 0 0 Cytosol 0.438718239010299 0.438717871187107 0.0952839999999999 0 hPsi_site_8499 iPseU_CNN:0.0952839999999999;iRNA_PseU:0 8500 chr16 23700918 23700918 1 + A G STAD 23700917 + 23700897 23700937 41 ATGAGCTCGCCCGGCTGCCCTACCTACGGACCTGGTTCCGC ATGAGCTCGCCCGGCTGCCCTGCCTACGGACCTGGTTCCGC < 41bp 0.872370410313772 0.494888162539622 0.7563734 0.28842634 prediction 0.744740820627543 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700917 chr16:23700918 nonsynonymous SNV 0.772 1 22 hPsi_associated_SNPs_3083 0 0 1 0 1 Ribosome 0.438718589707029 0.438718577749996 0.5127468 0 hPsi_site_8500 iPseU_CNN:0.5127468;iRNA_PseU:0 8501 chr19 35850397 35850397 1 + A G UCEC 35850396 + 35850376 35850416 41 TCCCGCTGATCATCACCAGCTACTGCTACAGCCGCCTGGTG TCCCGCTGATCATCACCAGCTGCTGCTACAGCCGCCTGGTG < 41bp 0.874983889838763 0.502661627378486 0.6784505 0.25394574 prediction 0.744644524920555 Functional Loss - FFAR3 ENSG00000185897 CDS Human protein_coding chr19:35850396 chr19:35850397 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3084 0 0 0 0 0 exosome 0.436657605526708 0.435615112284837 0.356901 0 hPsi_site_8501 iPseU_CNN:0.356901;iRNA_PseU:0 8502 chr6 28331127 28331127 1 + A G rs13201752 28331126 + 28331106 28331146 41 GGAGGATGCTGCAGAGAAGATAAAGTGGTAGCTTCTAGGCT GGAGGATGCTGCAGAGAAGATGAAGTGGTAGCTTCTAGGCT < 41bp 0.872317431924699 0.498168495924915 0.30838573 0.2738649 prediction 0.744634863849397 Functional Loss - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28331126 chr6:28331127 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_3085 0 0 1 0 2 exosome 0.438718230237178 0.43871877646426 0 0 hPsi_site_8502 iPseU_CNN:0;iRNA_PseU:0 8503 chr7 148489852 148489852 1 + A G COAD 148489851 + 148489831 148489871 41 AGATGGCTATCCTGCTTCAGTACAACACGGAAGATGCCTAC AGATGGCTATCCTGCTTCAGTGCAACACGGAAGATGCCTAC < 41bp 0.871994696117074 0.497130976118926 0.7243657 0.6366851 prediction 0.743989392234147 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148489851 chr7:148489852 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3086 0 0 1 0 2 Nucleus 0.438726250840734 0.438718886700711 0.1753612 0 hPsi_site_8503 iPseU_CNN:0.1753612;iRNA_PseU:0 8504 chr17 73564653 73564653 1 + A G UCEC 73564652 + 73564632 73564672 41 GGCCACCGGTCCAGCTGCCCTACCTGGCTTCTCTGCACTGT GGCCACCGGTCCAGCTGCCCTGCCTGGCTTCTCTGCACTGT < 41bp 0.871896915716101 0.488728166326331 0.8111905 0.6199808 prediction 0.743793831432201 Functional Loss - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73564652 chr17:73564653 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_3087 0 0 0 0 1 Endoplasmic reticulum 0.438248176369234 0.438530964349582 0.3824194 0 hPsi_site_8504 iPseU_CNN:0.3824194;iRNA_PseU:0 8505 chr3 139074556 139074556 1 + A G KIRC 139074555 + 139074535 139074575 41 CAACCAACTTGGTCCAGCTGTATCACGTGCTCCATCCAGAT CAACCAACTTGGTCCAGCTGTGTCACGTGCTCCATCCAGAT < 41bp 0.872055368895432 0.500268934749365 0.3590026 0.3322975 prediction 0.743572868292132 Functional Loss - MRPS22 ENSG00000175110;ENSG00000184432 CDS Human other chr3:139074555 chr3:139074556 nonsynonymous SNV 0.621 4 22 hPsi_associated_SNPs_3088 0 0 1 0 2 Ribosome 0.438618773683869 0.438421496195028 0 0 hPsi_site_8505 iPseU_CNN:0;iRNA_PseU:0 8506 chr19 7976175 7976175 1 + A G LUSC 7976174 + 7976154 7976194 41 CAGACCCCACCAAGCCGGACTATGACATCCGGGCCGACGTA CAGACCCCACCAAGCCGGACTGTGACATCCGGGCCGACGTA < 41bp 0.879138619966443 0.507368640423376 0.5968302 0.4937369 prediction 0.743539959086134 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7976174 chr19:7976175 nonsynonymous SNV 0.740 4 22 hPsi_associated_SNPs_3089 0 0 1 0 2 Cytosol 0.438718953729613 0.438756038181388 0.1936604 0 hPsi_site_8506 iPseU_CNN:0.1936604;iRNA_PseU:0 8507 chr2 74650465 74650465 1 + A G rs147864992 74650464 + 74650444 74650484 41 AGATGTACGAGTCCAATGGCTACACCATGGTCTACTGGCAT AGATGTACGAGTCCAATGGCTGCACCATGGTCTACTGGCAT < 41bp 0.876400054962569 0.504689688004246 0.39346552 0.193934 prediction 0.743420733916646 Functional Loss - WDR54 ENSG00000005448 CDS Human protein_coding chr2:74650464 chr2:74650465 nonsynonymous SNV 0.810 1 22 hPsi_associated_SNPs_3090 0 0 1 0 2 nucleus 0.443810719139323 0.438959747455237 0 0 hPsi_site_8507 iPseU_CNN:0;iRNA_PseU:0 8508 chr4 110415906 110415906 1 + A G LUSC 110415905 + 110415885 110415925 41 AAATGGCTAAGCCTTTTGGCTATGGCTATCCAACACTTCAG AAATGGCTAAGCCTTTTGGCTGTGGCTATCCAACACTTCAG < 41bp 0.874583094252335 0.502943139737321 0.3940241 0.27455565 prediction 0.743279909030028 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415905 chr4:110415906 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_3091 0 0 1 0 0 Cytosol 0.43871865674903 0.438719365348967 0 0 hPsi_site_8508 iPseU_CNN:0;iRNA_PseU:0 8509 chr14 38679097 38679097 1 + A G UCEC 38679096 + 38679076 38679116 41 ATCCCATCAAGGCGGCCCGCTACCGCCGGCCCACCGTGGCC ATCCCATCAAGGCGGCCCGCTGCCGCCGGCCCACCGTGGCC < 41bp 0.871560268612417 0.494831127847301 0.8029114 0.20105073 prediction 0.743120537224833 Functional Loss - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38679096 chr14:38679097 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3092 0 0 0 0 0 nucleus 0.438718591637459 0.438718596973786 0.6058228 0 hPsi_site_8509 iPseU_CNN:0.6058228;iRNA_PseU:0 8510 chr1 155103922 155103922 1 + A G UCEC 155103921 + 155103901 155103941 41 CAGACGCTGCCATGGAGCAGTACATACTGTACCTGGTGGAG CAGACGCTGCCATGGAGCAGTGCATACTGTACCTGGTGGAG < 41bp 0.871528880851325 0.484937652752161 0.62269765 0.38897115 prediction 0.743057761702649 Functional Loss - EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155103921 chr1:155103922 nonsynonymous SNV 0.815 5 22 hPsi_associated_SNPs_3093 0 0 1 0 0 Endoplasmic reticulum 0.43791739917634 0.438533504568604 0.2453953 0 hPsi_site_8510 iPseU_CNN:0.2453953;iRNA_PseU:0 8511 chr1 23376960 23376960 1 + A G OV 23376959 + 23376939 23376979 41 GCAGCCTGTTTTCCAGATATTATCAGTGGACCACAACAGAC GCAGCCTGTTTTCCAGATATTGTCAGTGGACCACAACAGAC < 41bp 0.871564431659328 0.500037981836581 0.4485662 0.2615365 prediction 0.743052899645493 Functional Loss - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23376959 chr1:23376960 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3094 0 0 1 0 2 Cytosol 0.438718685387533 0.438720743964651 0 0 hPsi_site_8511 iPseU_CNN:0;iRNA_PseU:0 8512 chr1 26514760 26514760 1 + A G LIHC 26514759 + 26514739 26514779 41 TCATTACCTGCATCTCCAAGTACCAGTCTCCAGGCCGGGCC TCATTACCTGCATCTCCAAGTGCCAGTCTCCAGGCCGGGCC < 41bp 0.871518159316902 0.487617557791037 0.6055503 0.25019255 prediction 0.743036318633803 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26514759 chr1:26514760 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3095 0 0 1 0 2 Cytosol 0.43871831803709 0.4387177846931 0.2111006 0 hPsi_site_8512 iPseU_CNN:0.2111006;iRNA_PseU:0 8513 chr10 72299403 72299403 1 + A G KICH 72299402 + 72299382 72299422 41 GCAAGGAGGGCCCCCTGACCTACAGGTTCCAGACCTGCCTT GCAAGGAGGGCCCCCTGACCTGCAGGTTCCAGACCTGCCTT < 41bp 0.87144707872886 0.492046676589073 0.35074854 0.24548593 prediction 0.74289415745772 Functional Loss - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72299402 chr10:72299403 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_3096 0 0 1 0 0 Ribosome 0.438719059236095 0.438716011844025 0 0 hPsi_site_8513 iPseU_CNN:0;iRNA_PseU:0 8514 chr5 174938471 174938471 1 + A G STAD 174938470 + 174938450 174938490 41 TCAGTGAGTTGGGAACAGCTTACGTTTCTGCAACAACTGGT TCAGTGAGTTGGGAACAGCTTGCGTTTCTGCAACAACTGGT < 41bp 0.871368766725202 0.496816274019219 0.60728025 0.29097307 prediction 0.742737533450403 Functional Loss - SFXN1 ENSG00000164466 CDS Human protein_coding chr5:174938470 chr5:174938471 nonsynonymous SNV 0.808 4 22 hPsi_associated_SNPs_3097 0 0 1 0 2 Ribosome 0.437689791207829 0.438779902911709 0.2145605 0 hPsi_site_8514 iPseU_CNN:0.2145605;iRNA_PseU:0 8515 chr9 93650065 93650065 1 + A G UCEC 93650064 + 93650044 93650084 41 GAAAGTGGCCTGTCAAGTGGTACGCTCCGGAATGCATCAAC GAAAGTGGCCTGTCAAGTGGTGCGCTCCGGAATGCATCAAC < 41bp 0.882772779515256 0.511467769136929 0.9285357 0.27510396 prediction 0.742610020756653 Functional Loss - SYK ENSG00000165025 CDS Human protein_coding chr9:93650064 chr9:93650065 nonsynonymous SNV 0.674 4 22 hPsi_associated_SNPs_3098 0 0 1 0 1 Cytosol 0.439146003493239 0.438282067617068 0.8570714 0 hPsi_site_8515 iPseU_CNN:0.8570714;iRNA_PseU:0 8516 chr16 29848123 29848123 1 + A G UCEC 29848122 + 29848102 29848142 41 CACTGGGGAGGAGTGGCTGGTAACAGTGCAGGACACAGAGG CACTGGGGAGGAGTGGCTGGTGACAGTGCAGGACACAGAGG < 41bp 0.871192835980478 0.487543001675546 0.56874925 0.2136465 prediction 0.742385671960957 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29848122 chr16:29848123 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_3099 0 0 0 0 1 Nucleus 0.438718593961312 0.438636885297506 0.1374985 0 hPsi_site_8516 iPseU_CNN:0.1374985;iRNA_PseU:0 8517 chr19 7623881 7623881 1 + A G STAD 7623880 + 7623860 7623900 41 GAATCCCTGGGCTGACAAGGTAAAGGTTCCAGACATGGCTG GAATCCCTGGGCTGACAAGGTGAAGGTTCCAGACATGGCTG < 41bp 0.871091164971292 0.497915111524954 0.728758 0.28487182 prediction 0.742182329942585 Functional Loss - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7623880 chr19:7623881 synonymous SNV . 0 22 hPsi_associated_SNPs_3100 0 0 1 0 0 Ribosome 0.438689588312238 0.4403001753169 0.457516 0 hPsi_site_8517 iPseU_CNN:0.457516;iRNA_PseU:0 8518 chr2 242151599 242151599 1 + A G UCEC 242151598 + 242151578 242151618 41 ACTTCTACTCCTCACCCGTCTACATTGCCTTCTTCAAGGGC ACTTCTACTCCTCACCCGTCTGCATTGCCTTCTTCAAGGGC < 41bp 0.871040528191806 0.498710550384045 0.320929 0.28655493 prediction 0.742081056383613 Functional Loss - ANO7 ENSG00000146205 CDS Human protein_coding chr2:242151598 chr2:242151599 nonsynonymous SNV 0.451 4 22 hPsi_associated_SNPs_3101 0 0 0 0 2 chromatin 0.438718592807858 0.438718640625196 0 0 hPsi_site_8518 iPseU_CNN:0;iRNA_PseU:0 8519 chr16 69967950 69967950 1 + A G UCEC 69967949 + 69967929 69967969 41 AATATGCCGGAAAGAACAATTACTGCCTGCAGATCAACCCC AATATGCCGGAAAGAACAATTGCTGCCTGCAGATCAACCCC < 41bp 0.871010375594697 0.493437206190987 0.3991157 0.26735377 prediction 0.742020751189394 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69967949 chr16:69967950 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3102 0 0 1 0 2 Ribosome 0.438718593061579 0.43871859316186 0 0 hPsi_site_8519 iPseU_CNN:0;iRNA_PseU:0 8520 chr12 6972488 6972488 1 + A G STAD 6972487 + 6972467 6972507 41 CCAAAGGTAGCCTTGGTTTCTATGGCAACGAAGACGAAGAC CCAAAGGTAGCCTTGGTTTCTGTGGCAACGAAGACGAAGAC < 41bp 0.878461412180197 0.507539663117492 0.3947074 0.33749092 prediction 0.74184349812541 Functional Loss - USP5 ENSG00000111667 CDS Human protein_coding chr12:6972487 chr12:6972488 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3103 0 0 1 0 1 Nucleus 0.438720979569017 0.438718714867864 0 0 hPsi_site_8520 iPseU_CNN:0;iRNA_PseU:0 8521 chr11 124501219 124501219 1 + A G UCEC 124501218 + 124501198 124501238 41 CAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGA CAAACCTGGAGATGGGCAGCTGCCTGAGGGGCTGCCGGAGA < 41bp 0.870908270685329 0.492793701207633 0.7015611 0.24140948 prediction 0.741816541370659 Functional Loss - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124501218 chr11:124501219 synonymous SNV . 0 22 hPsi_associated_SNPs_3104 0 0 1 0 3 Ribosome 0.438715079646871 0.438712427076871 0.4031222 0 hPsi_site_8521 iPseU_CNN:0.4031222;iRNA_PseU:0 8522 chr3 184299079 184299079 1 + A G ESCA 184299078 + 184299058 184299098 41 TGGACCGCACGGTCCCAGATTACACAACCTTCACGACAGTT TGGACCGCACGGTCCCAGATTGCACAACCTTCACGACAGTT < 41bp 0.874651880321862 0.50380314121207 0.64925873 0.24000734 prediction 0.741697478219583 Functional Loss - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184299078 chr3:184299079 nonsynonymous SNV 0.957 4 22 hPsi_associated_SNPs_3105 0 0 1 0 1 Endoplasmic reticulum 0.438718622157417 0.438718108093455 0.29851746 0 hPsi_site_8522 iPseU_CNN:0.29851746;iRNA_PseU:0 8523 chr1 9416336 9416336 1 + A G UCEC 9416335 + 9416315 9416355 41 CCCCCCTGCACTCTGTCGGGTACACAACCCTCGTGGGGAAT CCCCCCTGCACTCTGTCGGGTGCACAACCCTCGTGGGGAAT < 41bp 0.870820835762165 0.492267400825097 0.92614275 0.6669445 prediction 0.741641671524329 Functional Loss - SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9416335 chr1:9416336 nonsynonymous SNV 0.957 4 22 hPsi_associated_SNPs_3106 0 0 0 0 0 nucleus 0.438718576916535 0.438718587170074 0.5183965 0 hPsi_site_8523 iPseU_CNN:0.5183965;iRNA_PseU:0 8524 chr19 41916898 41916898 1 + A G BLCA 41916897 + 41916877 41916917 41 ACACCATGGACCGCATCCTCTATGAGTCTCAGCGGCAGGTG ACACCATGGACCGCATCCTCTGTGAGTCTCAGCGGCAGGTG < 41bp 0.878761538546694 0.507976052789019 0.557425 0.3474055 prediction 0.741570971515349 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41916897 chr19:41916898 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_3107 0 0 1 0 2 Cytosol 0.434852251991255 0.438271731740779 0.11485 0 hPsi_site_8524 iPseU_CNN:0.11485;iRNA_PseU:0 8525 chr11 130319254 130319254 1 + A G LUAD 130319253 + 130319233 130319273 41 GGCTCCGCGGAGCCTTTGGCTACCGAGGCGCCGAGTATGTC GGCTCCGCGGAGCCTTTGGCTGCCGAGGCGCCGAGTATGTC < 41bp 0.878698148629546 0.507937083471428 0.66129875 0.28570756 prediction 0.741522130316236 Functional Loss - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130319253 chr11:130319254 nonsynonymous SNV 0.980 3 22 hPsi_associated_SNPs_3108 0 0 0 0 0 exosome 0.438718592997039 0.438718592996326 0.3225975 0 hPsi_site_8525 iPseU_CNN:0.3225975;iRNA_PseU:0 8526 chr4 106819099 106819099 1 + A G UCEC 106819098 + 106819078 106819118 41 CATCGATTGGCCTATGTCGTTATGGTGGGAGGATTGACTGC CATCGATTGGCCTATGTCGTTGTGGTGGGAGGATTGACTGC < 41bp 0.870663535169183 0.488914232508381 0.28133345 0.27891064 prediction 0.741327070338366 Functional Loss - NPNT ENSG00000168743 CDS Human protein_coding chr4:106819098 chr4:106819099 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3109 0 0 1 0 1 exosome 0.438574074936923 0.438098994115117 0 0 hPsi_site_8526 iPseU_CNN:0;iRNA_PseU:0 8527 chr11 101985013 101985013 1 + A G STAD 101985012 + 101984992 101985032 41 GTAGTCTCTGGCCCAGCAGCTACACCCACAGCTCAGCATCT GTAGTCTCTGGCCCAGCAGCTGCACCCACAGCTCAGCATCT < 41bp 0.870438453277292 0.496010384738274 0.7395919 0.2664361 prediction 0.740876906554583 Functional Loss - YAP1 ENSG00000137693 CDS Human protein_coding chr11:101985012 chr11:101985013 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_3110 0 0 1 0 0 Ribosome 0.438732253756272 0.438717324525039 0.4791838 0 hPsi_site_8527 iPseU_CNN:0.4791838;iRNA_PseU:0 8528 chr9 33030602 33030602 1 + A G LUSC 33030601 + 33030581 33030621 41 ATCAGTCCTAAAGATAGATGTAAAAGCTGCAACGGAAGGAA ATCAGTCCTAAAGATAGATGTGAAAGCTGCAACGGAAGGAA < 41bp 0.870409992458565 0.498574270701588 0.6781783 0.42713222 prediction 0.74081998491713 Functional Loss - DNAJA1 ENSG00000086061 CDS Human protein_coding chr9:33030601 chr9:33030602 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3111 0 0 1 0 1 Cytosol 0.438718468745991 0.438718592012223 0.3563566 0 hPsi_site_8528 iPseU_CNN:0.3563566;iRNA_PseU:0 8529 chr17 44952635 44952635 1 + A G SKCM 44952634 + 44952614 44952654 41 TGTGCGGTGACAACCTCAAGTACAGCACCAAGTTTCTGAGC TGTGCGGTGACAACCTCAAGTGCAGCACCAAGTTTCTGAGC < 41bp 0.88088680437427 0.510480194974467 0.53742653 0.5136343 prediction 0.740813218799606 Functional Loss - WNT9B ENSG00000158955 CDS Human protein_coding chr17:44952634 chr17:44952635 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3112 0 0 0 0 1 exosome 0.463571026460873 0.438872551137883 0.0475844599999999 0 hPsi_site_8529 iPseU_CNN:0.0475844599999999;iRNA_PseU:0 8530 chr11 63668077 63668077 1 + A G UCEC 63668076 + 63668056 63668096 41 GAAAATACCGTATTCCATTCTACATGTCCACGGACTGTGAA GAAAATACCGTATTCCATTCTGCATGTCCACGGACTGTGAA < 41bp 0.87911208814313 0.508723978599857 0.70846164 0.42891064 prediction 0.740776219086545 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63668076 chr11:63668077 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3113 0 0 1 0 2 Nucleus 0.43878101412343 0.438719423416864 0.41692328 0 hPsi_site_8530 iPseU_CNN:0.41692328;iRNA_PseU:0 8531 chr12 49310831 49310831 1 + A G rs140228766 49310830 + 49310810 49310850 41 GGCCATGGAGCAGAACTATATAGATTCTGAGTATGAAAGCA GGCCATGGAGCAGAACTATATGGATTCTGAGTATGAAAGCA < 41bp 0.870362343422511 0.4948957780277 0.26933464 0.20504013 prediction 0.740724686845021 Functional Loss - CCDC65 ENSG00000139537 CDS Human protein_coding chr12:49310830 chr12:49310831 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_3114 0 0 0 0 2 chromatin 0.438718592920603 0.438718592995102 0 0 hPsi_site_8531 iPseU_CNN:0;iRNA_PseU:0 8532 chr6 44121422 44121422 1 + A G UCEC 44121421 + 44121401 44121441 41 GGCTTCCCTTAGGGCTCATGTACATGCTGCTGAAGCACCTG GGCTTCCCTTAGGGCTCATGTGCATGCTGCTGAAGCACCTG < 41bp 0.870349754114429 0.498388141870017 0.3343126 0.23644239 prediction 0.740699508228857 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44121421 chr6:44121422 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3115 0 0 1 8 1 Ribosome 0.438720493386033 0.438718593107653 0 0 hPsi_site_8532 iPseU_CNN:0;iRNA_PseU:0 8533 chr3 131102053 131102053 1 + A G rs11549806 131102052 + 131102032 131102072 41 GTATACCCTGCGGGATGGTGTAGGAGGCCTGCCTACCTTCC GTATACCCTGCGGGATGGTGTGGGAGGCCTGCCTACCTTCC < 41bp 0.871442016004375 0.501117693223267 0.6999853 0.38148144 prediction 0.740648645562216 Functional Loss - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131102052 chr3:131102053 synonymous SNV . 0 22 hPsi_associated_SNPs_3116 0 0 1 0 1 Ribosome 0.438718593062955 0.438718592998895 0.3999706 0 hPsi_site_8533 iPseU_CNN:0.3999706;iRNA_PseU:0 8534 chr22 25023484 25023484 1 + A G LGG 25023483 + 25023463 25023503 41 CCACTCACCCGATCTCCTACTACAAGCCCGAGTTCTACACG CCACTCACCCGATCTCCTACTGCAAGCCCGAGTTCTACACG < 41bp 0.878349450728249 0.508038903180163 0.6429907 0.2658162 prediction 0.740621095096173 Functional Loss - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25023483 chr22:25023484 nonsynonymous SNV 0.006 4 22 hPsi_associated_SNPs_3117 0 0 0 0 1 exosome 0.438041248187276 0.438732597629561 0.2859814 0 hPsi_site_8534 iPseU_CNN:0.2859814;iRNA_PseU:0 8535 chr5 140048707 140048707 1 + A G rs35983033 140048706 + 140048686 140048726 41 GCTCCAGTGAAGGTACCATCTACCTCTTCAATTGGAATGGC GCTCCAGTGAAGGTACCATCTGCCTCTTCAATTGGAATGGC < 41bp 0.87025004763345 0.490622070244365 0.5875553 0.28924006 prediction 0.740500095266899 Functional Loss - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140048706 chr5:140048707 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3118 0 0 1 0 1 Ribosome 0.438683509129118 0.437399509101405 0.1751106 0 hPsi_site_8535 iPseU_CNN:0.1751106;iRNA_PseU:0 8536 chr15 74836475 74836475 1 + A G rs150630579 74836474 + 74836454 74836494 41 ACCTTCTGGCAGCACTCCCTTAGGTCCCTTAGCCAGAGTTC ACCTTCTGGCAGCACTCCCTTGGGTCCCTTAGCCAGAGTTC < 41bp 0.870174708288839 0.478020355412939 0.5701241 0.3036639 prediction 0.740349416577678 Functional Loss - ARID3B ENSG00000179361 CDS Human protein_coding chr15:74836474 chr15:74836475 synonymous SNV . 0 22 hPsi_associated_SNPs_3119 0 0 0 0 0 Nucleus 0.438751383521197 0.438172898607841 0.1402482 0 hPsi_site_8536 iPseU_CNN:0.1402482;iRNA_PseU:0 8537 chr1 1389795 1389795 1 + A G rs1610766 1389794 + 1389774 1389814 41 CGACAGCCGTCACTGGCCGCTACATCGAGGCTCGGCTGGGG CGACAGCCGTCACTGGCCGCTGCATCGAGGCTCGGCTGGGG < 41bp 0.877003823829879 0.506868849945622 0.337973 0.25612378 prediction 0.740269947768513 Functional Loss - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1389794 chr1:1389795 nonsynonymous SNV 0.000 4 22 hPsi_associated_SNPs_3120 0 0 0 0 2 Nucleus 0.438717300855866 0.438709653598611 0 0 hPsi_site_8537 iPseU_CNN:0;iRNA_PseU:0 8538 chr16 88643760 88643760 1 + A G UCEC 88643759 + 88643739 88643779 41 GAGGACCGGGCAAGTGAGCCTAAATCCCAAGACCAGGACTC GAGGACCGGGCAAGTGAGCCTGAATCCCAAGACCAGGACTC < 41bp 0.879623320544865 0.509518356229875 0.53194135 0.26515704 prediction 0.740209928629979 Functional Loss - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88643759 chr16:88643760 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_3121 0 0 1 0 1 chromatin 0.438718095367201 0.43872038405211 0.0638827 0 hPsi_site_8538 iPseU_CNN:0.0638827;iRNA_PseU:0 8539 chr6 12294231 12294231 1 + A G UCEC 12294230 + 12294210 12294250 41 CAAGAGAGCCTTGGAGAATTTACTTCCCACAAAGGCAACAG CAAGAGAGCCTTGGAGAATTTGCTTCCCACAAAGGCAACAG < 41bp 0.879419121549325 0.509339797472296 0.7040374 0.35363623 prediction 0.740158648154059 Functional Loss - EDN1 ENSG00000078401 CDS Human protein_coding chr6:12294230 chr6:12294231 synonymous SNV . 0 22 hPsi_associated_SNPs_3122 0 0 0 0 2 exosome 0.438718588440135 0.438718590096589 0.4080748 0 hPsi_site_8539 iPseU_CNN:0.4080748;iRNA_PseU:0 8540 chr12 131476867 131476867 1 + A G STAD 131476866 + 131476846 131476886 41 GTCCCGGAGTGATACTGAGTTACCTCCAAAATGTATCCCTC GTCCCGGAGTGATACTGAGTTGCCTCCAAAATGTATCCCTC < 41bp 0.878661527934922 0.508589720548664 0.6482762 0.2696457 prediction 0.740143614772517 Functional Loss - ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131476866 chr12:131476867 nonsynonymous SNV 0.020 2 22 hPsi_associated_SNPs_3123 0 0 0 0 2 chromatin 0.43870527287346 0.438580142509181 0.2965524 0 hPsi_site_8540 iPseU_CNN:0.2965524;iRNA_PseU:0 8541 chr5 150844683 150844683 1 + A G STAD 150844682 + 150844662 150844702 41 TGATACTGTGATGTATGGACTAGAATCCAGCCCCTGCTCCT TGATACTGTGATGTATGGACTGGAATCCAGCCCCTGCTCCT < 41bp 0.869985294536243 0.482076990934866 0.7935824 0.63600594 prediction 0.739970589072487 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150844682 chr5:150844683 synonymous SNV . 0 22 hPsi_associated_SNPs_3124 0 0 1 0 2 Endoplasmic reticulum 0.438446773581884 0.438681997835479 0.31515292 0 hPsi_site_8541 iPseU_CNN:0.31515292;iRNA_PseU:0 8542 chr16 20839834 20839834 1 + A G LUSC 20839833 + 20839813 20839853 41 CAATCCTTGAATTGGCTCGGTATTTCCTTAAGCATGGCCCA CAATCCTTGAATTGGCTCGGTGTTTCCTTAAGCATGGCCCA < 41bp 0.872698824974345 0.502746313536731 0.65818405 0.41999465 prediction 0.739905022875228 Functional Loss - REXO5 ENSG00000005189 CDS Human protein_coding chr16:20839833 chr16:20839834 nonsynonymous SNV 0.880 3 22 hPsi_associated_SNPs_3125 0 0 1 0 2 unknown 0.438718592995213 0.438718592992247 0.3163681 0 hPsi_site_8542 iPseU_CNN:0.3163681;iRNA_PseU:0 8543 chr1 16065193 16065193 1 + A G LUAD 16065192 + 16065172 16065212 41 CGATGTGGTCAGCACGCGGCTATACAATCAGCCGGTGGACA CGATGTGGTCAGCACGCGGCTGTACAATCAGCCGGTGGACA < 41bp 0.869918011877926 0.489501446322926 0.2946846 0.17369312 prediction 0.739836023755852 Functional Loss - SLC25A34 ENSG00000162461 CDS Human protein_coding chr1:16065192 chr1:16065193 synonymous SNV . 0 22 hPsi_associated_SNPs_3126 0 0 0 0 0 exosome 0.439565760251773 0.439592813452703 0 0 hPsi_site_8543 iPseU_CNN:0;iRNA_PseU:0 8544 chr3 183904427 183904427 1 + A G COAD 183904426 + 183904406 183904446 41 GGGCCGTGTGCCAGCGCATGTACAACACTCTGCGTCTGTAT GGGCCGTGTGCCAGCGCATGTGCAACACTCTGCGTCTGTAT < 41bp 0.874296815472937 0.50449753621773 0.9207218 0.6860205 prediction 0.739598558510415 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183904426 chr3:183904427 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3127 0 0 1 0 1 Cytosol 0.43869936960789 0.437550474765411 0.4694026 0 hPsi_site_8544 iPseU_CNN:0.4694026;iRNA_PseU:0 8545 chr11 293450 293450 1 + A G LUAD 293449 + 293429 293469 41 GGTGGCTGACAAGATCAAGGTACCCTTTGACGTGGAGCAGA GGTGGCTGACAAGATCAAGGTGCCCTTTGACGTGGAGCAGA < 41bp 0.87925609834753 0.509495204785182 0.424708 0.22010067 prediction 0.739521787124695 Functional Loss - PGGHG ENSG00000142102 CDS Human protein_coding chr11:293449 chr11:293450 synonymous SNV . 0 22 hPsi_associated_SNPs_3128 0 0 0 0 1 unknown 0.438722388390537 0.438721558549303 0 0 hPsi_site_8545 iPseU_CNN:0;iRNA_PseU:0 8546 chr14 63747774 63747774 1 + A G UCEC 63747773 + 63747753 63747793 41 CTGTCGTAAACCCTGCCTCTTACCACAATGTCCAGGAGGAA CTGTCGTAAACCCTGCCTCTTGCCACAATGTCCAGGAGGAA < 41bp 0.869737267176202 0.487680758297045 0.5771172 0.2949869 prediction 0.739474534352404 Functional Loss - RHOJ ENSG00000126785 CDS Human protein_coding chr14:63747773 chr14:63747774 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3129 0 0 0 0 2 Cytosol 0.438740649172133 0.438719795492803 0.1542344 0 hPsi_site_8546 iPseU_CNN:0.1542344;iRNA_PseU:0 8547 chr1 155257018 155257018 1 + A G rs146467190 155257017 + 155256997 155257037 41 CCAGTGTTCGGGCTGACACCTACTGCCGCCTTTACTCACTC CCAGTGTTCGGGCTGACACCTGCTGCCGCCTTTACTCACTC < 41bp 0.879139207565104 0.509481965131435 0.26545548 0.19931501 prediction 0.739314484867338 Functional Loss - HCN3 ENSG00000143630 CDS Human protein_coding chr1:155257017 chr1:155257018 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3130 0 0 0 0 1 chromatin 0.438718584235643 0.438718625473057 0 0 hPsi_site_8547 iPseU_CNN:0;iRNA_PseU:0 8548 chr12 56536104 56536104 1 + A G STAD 56536103 + 56536083 56536123 41 CACTGGCGTGCTGGGCTCATTATCCCTGCCCCTCTCAGAGC CACTGGCGTGCTGGGCTCATTGTCCCTGCCCCTCTCAGAGC < 41bp 0.881123719101506 0.511494949688467 0.45434856 0.34623224 prediction 0.739257538826078 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536103 chr12:56536104 synonymous SNV . 0 22 hPsi_associated_SNPs_3131 0 0 1 0 1 Endoplasmic reticulum 0.438676605737234 0.438719484247026 0 0 hPsi_site_8548 iPseU_CNN:0;iRNA_PseU:0 8549 chr17 66039350 66039350 1 + A G rs4638 66039349 + 66039329 66039369 41 GCATCATGATGATCCAGAAGTATTAGCAGATACCTGCTGGG GCATCATGATGATCCAGAAGTGTTAGCAGATACCTGCTGGG < 41bp 0.869626289637204 0.495690599586358 0.32790986 0.2564249 prediction 0.739252579274409 Functional Loss - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039349 chr17:66039350 synonymous SNV . 0 22 hPsi_associated_SNPs_3132 0 0 1 0 0 Cytosol 0.438690780396894 0.438040280556225 0 0 hPsi_site_8549 iPseU_CNN:0;iRNA_PseU:0 8550 chr11 47330145 47330145 1 + A G UCEC 47330144 + 47330124 47330164 41 ATCACCTCTTCTCTCTAGGGTAAAGCCCACAGCTTGAAGCC ATCACCTCTTCTCTCTAGGGTGAAGCCCACAGCTTGAAGCC < 41bp 0.872314926757011 0.502717325093273 0.7076439 0.38131416 prediction 0.739195203327476 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47330144 chr11:47330145 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3133 0 0 1 0 0 Nucleus 0.438718592999938 0.438718592995102 0.4152878 0 hPsi_site_8550 iPseU_CNN:0.4152878;iRNA_PseU:0 8551 chr17 37900435 37900435 1 + A G LUAD 37900434 + 37900414 37900454 41 TCTTGCGCCGATCTGGCCTCTATTACTCCACCAAGGGCACC TCTTGCGCCGATCTGGCCTCTGTTACTCCACCAAGGGCACC < 41bp 0.869584298588048 0.484812340992935 0.64216226 0.30552605 prediction 0.739168597176096 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37900434 chr17:37900435 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3134 0 0 1 0 1 Cytosol 0.438718593664406 0.438718592742908 0.28432452 0 hPsi_site_8551 iPseU_CNN:0.28432452;iRNA_PseU:0 8552 chr6 41010852 41010852 1 + A G UCEC 41010851 + 41010831 41010871 41 TGCTGTCCTGGTGCCCATTCTACAAAGTCTTATTGCTTGTA TGCTGTCCTGGTGCCCATTCTGCAAAGTCTTATTGCTTGTA < 41bp 0.869554327502323 0.499102896503862 0.62467164 0.314624 prediction 0.739108655004646 Functional Loss - TSPO2 ENSG00000112212 CDS Human protein_coding chr6:41010851 chr6:41010852 nonsynonymous SNV 0.918 1 22 hPsi_associated_SNPs_3135 0 0 0 0 1 exosome 0.438699114529503 0.43871681931849 0.24934328 0 hPsi_site_8552 iPseU_CNN:0.24934328;iRNA_PseU:0 8553 chr2 113243513 113243513 1 + A G UCEC 113243512 + 113243492 113243532 41 AGGTCACGAGCCCGGGCTGGTACAGTTGGTGAATTACTACA AGGTCACGAGCCCGGGCTGGTGCAGTTGGTGAATTACTACA < 41bp 0.869475129777245 0.489210050378438 0.68522465 0.34785682 prediction 0.738950259554491 Functional Loss - TTL ENSG00000114999 CDS Human protein_coding chr2:113243512 chr2:113243513 synonymous SNV . 0 22 hPsi_associated_SNPs_3136 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0.3704493 0 hPsi_site_8553 iPseU_CNN:0.3704493;iRNA_PseU:0 8554 chr14 100126683 100126683 1 + A G UCEC 100126682 + 100126662 100126702 41 CGGTCACAGGGGGCTACGTGTACCGGGGCTGCGAGTACCCC CGGTCACAGGGGGCTACGTGTGCCGGGGCTGCGAGTACCCC < 41bp 0.869453304313645 0.488831232110871 0.6178695 0.24244642 prediction 0.73890660862729 Functional Loss - HHIPL1 ENSG00000182218 CDS Human protein_coding chr14:100126682 chr14:100126683 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3137 0 0 0 0 2 exosome 0.438718593165894 0.438718593255922 0.235739 0 hPsi_site_8554 iPseU_CNN:0.235739;iRNA_PseU:0 8555 chr8 27398143 27398143 1 + A G COAD 27398142 + 27398122 27398162 41 CTGAGGAGGAAATCCAGTTCTATGTGCAGCAGTTCAAGAAG CTGAGGAGGAAATCCAGTTCTGTGTGCAGCAGTTCAAGAAG < 41bp 0.876453282032565 0.507003083788607 0.5311463 0.36278343 prediction 0.738900396487917 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27398142 chr8:27398143 nonsynonymous SNV 0.969 3 22 hPsi_associated_SNPs_3138 0 0 1 0 2 Cytosol 0.438403659285534 0.438911013147959 0.0622925999999999 0 hPsi_site_8555 iPseU_CNN:0.0622925999999999;iRNA_PseU:0 8556 chr3 38038990 38038990 1 + A G rs200980879 38038989 + 38038969 38039009 41 CGCAGGGGCTGGCTTTGACCTACAGCCTCCGGGACAGGGAA CGCAGGGGCTGGCTTTGACCTGCAGCCTCCGGGACAGGGAA < 41bp 0.869402128262096 0.494046662641032 0.28118128 0.30296817 prediction 0.738804256524193 Functional Loss - VILL ENSG00000136059 CDS Human protein_coding chr3:38038989 chr3:38038990 nonsynonymous SNV 0.102 0 22 hPsi_associated_SNPs_3139 0 0 1 0 1 chromatin 0.438718585410617 0.438718593003985 0 0 hPsi_site_8556 iPseU_CNN:0;iRNA_PseU:0 8557 chr2 37464981 37464981 1 + A G LUAD 37464980 + 37464960 37465000 41 CTGGTGGAACTGGGCCCAGGTAGGGGAACCCTCGTGGGAGA CTGGTGGAACTGGGCCCAGGTGGGGGAACCCTCGTGGGAGA < 41bp 0.878266309431802 0.508881697053639 0.6027225 0.27162153 prediction 0.738769224756324 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37464980 chr2:37464981 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_3140 0 0 1 0 1 chromatin 0.438718593007766 0.438712982216789 0.205445 0 hPsi_site_8557 iPseU_CNN:0.205445;iRNA_PseU:0 8558 chr7 36194191 36194191 1 + A G LUAD 36194190 + 36194170 36194210 41 CCTGGCATTGGTCAGTGGTGTAGGCGCCACCAAGCTGGAGC CCTGGCATTGGTCAGTGGTGTGGGCGCCACCAAGCTGGAGC < 41bp 0.869366582484287 0.490955012188748 0.63514394 0.26294333 prediction 0.738733164968574 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36194190 chr7:36194191 synonymous SNV . 0 22 hPsi_associated_SNPs_3141 0 0 0 0 0 cytosol 0.438338027513782 0.43906357649519 0.27028788 0 hPsi_site_8558 iPseU_CNN:0.27028788;iRNA_PseU:0 8559 chr2 73447196 73447196 1 + A G COAD 73447195 + 73447175 73447215 41 TCAGCCTGTGACCACTGCCTTAGGGCACTAGAGAAGGCAGA TCAGCCTGTGACCACTGCCTTGGGGCACTAGAGAAGGCAGA < 41bp 0.869215237660389 0.479652078607802 0.29987058 0.20974079 prediction 0.738430475320777 Functional Loss - SMYD5 ENSG00000135632;ENSG00000135632 exonic;splicing Human other chr2:73447195 chr2:73447196 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_3142 0 0 1 0 1 Ribosome 0.438718572470407 0.438718602196792 0 0 hPsi_site_8559 iPseU_CNN:0;iRNA_PseU:0 8560 chr17 73096480 73096480 1 + A G UCEC 73096479 + 73096459 73096499 41 ACAACACAGGCTACTGCGTGTACATACTGGGTGTGATGTGG ACAACACAGGCTACTGCGTGTGCATACTGGGTGTGATGTGG < 41bp 0.878224381963214 0.509041796544401 0.30883163 0.18529904 prediction 0.738365170837625 Functional Loss - SLC16A5 ENSG00000170190 CDS Human protein_coding chr17:73096479 chr17:73096480 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_3143 0 0 0 0 0 Cytosol 0.438031661331227 0.437481781801844 0 0 hPsi_site_8560 iPseU_CNN:0;iRNA_PseU:0 8561 chr22 29177081 29177081 1 + A G BLCA 29177080 + 29177060 29177100 41 ATACCTGGGATATTAGATGTTATTTGTGAAGAAATGGATCA ATACCTGGGATATTAGATGTTGTTTGTGAAGAAATGGATCA < 41bp 0.869107070896652 0.497110411209166 0.33398435 0.26453263 prediction 0.738214141793303 Functional Loss - CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29177080 chr22:29177081 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_3144 0 0 1 0 1 Ribosome 0.438718568511116 0.438718403982605 0 0 hPsi_site_8561 iPseU_CNN:0;iRNA_PseU:0 8562 chr13 61083966 61083966 1 + A G BLCA 61083965 + 61083945 61083985 41 GAAGCATCGAGGCAAGCTCTTATGGATAATGGCAACAACTT GAAGCATCGAGGCAAGCTCTTGTGGATAATGGCAACAACTT < 41bp 0.869039032066564 0.491605315052371 0.4580194 0.27923393 prediction 0.738078064133128 Functional Loss - TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61083965 chr13:61083966 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_3145 0 0 0 0 2 Cytosol 0.439343964042432 0.44295744680273 0 0 hPsi_site_8562 iPseU_CNN:0;iRNA_PseU:0 8563 chr18 72999686 72999686 1 + A G COAD 72999685 + 72999665 72999705 41 TGGACCCGCTGGCGATGCTGTACAAGATCAGCAACAGCATG TGGACCCGCTGGCGATGCTGTGCAAGATCAGCAACAGCATG < 41bp 0.869035787922528 0.499362464660035 0.94434965 0.6076215 prediction 0.738071575845055 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72999685 chr18:72999686 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3146 0 0 0 0 0 Cytosol 0.43879466462601 0.438735905583344 0.6734563 0 hPsi_site_8563 iPseU_CNN:0.6734563;iRNA_PseU:0 8564 chr2 206608245 206608245 1 + A G UCEC 206608244 + 206608224 206608264 41 TAAACGGCAAGGACTGGGAATACATTCAGGACCCCAGGACC TAAACGGCAAGGACTGGGAATGCATTCAGGACCCCAGGACC < 41bp 0.86902565568408 0.487518042623978 0.3629374 0.30991116 prediction 0.73805131136816 Functional Loss - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206608244 chr2:206608245 nonsynonymous SNV 0.977 2 22 hPsi_associated_SNPs_3147 0 0 0 0 1 Nucleus 0.438717921800166 0.43871800509328 0 0 hPsi_site_8564 iPseU_CNN:0;iRNA_PseU:0 8565 chr19 10798292 10798292 1 + A G HNSC 10798291 + 10798271 10798311 41 CACAGGGCAAGCAGAAAGGCTATAACCATGGACAAGGCAGC CACAGGGCAAGCAGAAAGGCTGTAACCATGGACAAGGCAGC < 41bp 0.869016635158458 0.493936664156424 0.30429327 0.23434868 prediction 0.738033270316916 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10798291 chr19:10798292 nonsynonymous SNV 0.966 3 22 hPsi_associated_SNPs_3148 0 0 1 0 1 Cytosol 0.438717758456464 0.438718032060569 0 0 hPsi_site_8565 iPseU_CNN:0;iRNA_PseU:0 8566 chr8 24773188 24773188 1 + A G UCEC 24773187 + 24773167 24773207 41 TGGCTCGTCATTTGCGCGAATACCAGGACCTCCTCAACGTC TGGCTCGTCATTTGCGCGAATGCCAGGACCTCCTCAACGTC < 41bp 0.876530073941414 0.507527746119234 0.7569422 0.23605052 prediction 0.738004655644361 Functional Loss - NEFM ENSG00000104722 CDS Human protein_coding chr8:24773187 chr8:24773188 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3149 0 0 0 0 2 exosome 0.438839028232309 0.438675914634566 0.5138844 0 hPsi_site_8566 iPseU_CNN:0.5138844;iRNA_PseU:0 8567 chr19 44636077 44636077 1 + A G UCEC 44636076 + 44636056 44636096 41 GTGAGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTT GTGAGGAGTGTGGGAAGGGCTGCAAAAGGAGGTTGGATCTT < 41bp 0.870247122474559 0.501250822661024 0.40190127 0.28896856 prediction 0.73799259962707 Functional Loss - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44636076 chr19:44636077 nonsynonymous SNV 0.007 3 22 hPsi_associated_SNPs_3150 0 0 1 0 0 exosome 0.438718592962595 0.438718411222141 0 0 hPsi_site_8567 iPseU_CNN:0;iRNA_PseU:0 8568 chr21 45833830 45833830 1 + A G HNSC 45833829 + 45833809 45833849 41 GGCACCGACCCCTACAAGCCTAAGTGCCCCGAGAGCGACGC GGCACCGACCCCTACAAGCCTGAGTGCCCCGAGAGCGACGC < 41bp 0.876749960617128 0.50776945530733 0.27940306 0.22938153 prediction 0.737961010619595 Functional Loss - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45833829 chr21:45833830 nonsynonymous SNV 0.899 3 22 hPsi_associated_SNPs_3151 0 0 0 0 1 Ribosome 0.438718592922688 0.438742941333386 0 0 hPsi_site_8568 iPseU_CNN:0;iRNA_PseU:0 8569 chr19 35741347 35741347 1 + A G LGG 35741346 + 35741326 35741366 41 AACCCATCGTCATCTGGAAGTACAAGTCTTTCTGCCGGGAC AACCCATCGTCATCTGGAAGTGCAAGTCTTTCTGCCGGGAC < 41bp 0.879579058483444 0.510609983513963 0.8537015 0.5911125 prediction 0.737938149938963 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35741346 chr19:35741347 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3152 0 0 1 0 0 chromatin 0.438718578505239 0.438818151643619 0.525178 0 hPsi_site_8569 iPseU_CNN:0.525178;iRNA_PseU:0 8570 chr1 161069477 161069477 1 + A G UCEC 161069476 + 161069456 161069496 41 CCAGAAGGGGCCCCATGGACTACGGCATCACTCATGTTCTG CCAGAAGGGGCCCCATGGACTGCGGCATCACTCATGTTCTG < 41bp 0.87600645103326 0.507101338135744 0.57849175 0.28697592 prediction 0.737810225795032 Functional Loss - KLHDC9 ENSG00000162755 CDS Human protein_coding chr1:161069476 chr1:161069477 nonsynonymous SNV 0.163 1 22 hPsi_associated_SNPs_3153 0 0 1 0 1 chromatin 0.424425232944896 0.412926090155414 0.1569835 0 hPsi_site_8570 iPseU_CNN:0.1569835;iRNA_PseU:0 8571 chr12 53421581 53421581 1 + A G UCEC 53421580 + 53421560 53421600 41 CTCTAGAGTATCGAGATCGTTATGATTCAGACCGGTATCGG CTCTAGAGTATCGAGATCGTTGTGATTCAGACCGGTATCGG < 41bp 0.880036700031083 0.511234598710113 0.86650217 0.6414465 prediction 0.737604202641941 Functional Loss - EIF4B ENSG00000063046 CDS Human protein_coding chr12:53421580 chr12:53421581 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3154 0 0 1 0 0 Cytosol 0.438718641235161 0.438718654647244 0.45011134 0 hPsi_site_8571 iPseU_CNN:0.45011134;iRNA_PseU:0 8572 chr20 30681703 30681703 1 + A G UCEC 30681702 + 30681682 30681722 41 CCTTCATCGAGCAGAGGAACTACATCCACCGAGACCTCCGA CCTTCATCGAGCAGAGGAACTGCATCCACCGAGACCTCCGA < 41bp 0.880335514774403 0.511536767625751 0.6897031 0.4033479 prediction 0.737597494297303 Functional Loss - HCK ENSG00000101336 CDS Human protein_coding chr20:30681702 chr20:30681703 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3155 0 0 0 0 1 Nucleus 0.438747856051481 0.438900983786891 0.3794062 0 hPsi_site_8572 iPseU_CNN:0.3794062;iRNA_PseU:0 8573 chr6 41556419 41556419 1 + A G LUAD 41556418 + 41556398 41556438 41 CACGCCCTGGATGACCGGAGTACAGCCCAGTGCCGGGTACA CACGCCCTGGATGACCGGAGTGCAGCCCAGTGCCGGGTACA < 41bp 0.88472801256754 0.515938187700475 0.72278726 0.5768964 prediction 0.737579649734129 Functional Loss - FOXP4 ENSG00000137166 CDS Human protein_coding chr6:41556418 chr6:41556419 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3156 0 0 1 0 2 Nucleus 0.438699565208882 0.438692826280181 0.29178172 0 hPsi_site_8573 iPseU_CNN:0.29178172;iRNA_PseU:0 8574 chrX 55478927 55478927 1 + A G STAD 55478926 + 55478906 55478946 41 CCCTATGGCCGCCTCTGTGGTAGCGAGCACCCCCGAAGACG CCCTATGGCCGCCTCTGTGGTGGCGAGCACCCCCGAAGACG < 41bp 0.868770545868157 0.499851958528205 0.64545304 0.2024008 prediction 0.737541091736314 Functional Loss - MAGEH1 ENSG00000187601 CDS Human protein_coding chrX:55478926 chrX:55478927 synonymous SNV . 0 22 hPsi_associated_SNPs_3157 0 0 0 0 0 exosome 0.438718593243331 0.438718592990688 0.29090608 0 hPsi_site_8574 iPseU_CNN:0.29090608;iRNA_PseU:0 8575 chr14 69890891 69890891 1 + A G UCEC 69890890 + 69890870 69890910 41 AGTCATCGTGCCTGAAGGAGTACATGCCCTTTATGAAGATA AGTCATCGTGCCTGAAGGAGTGCATGCCCTTTATGAAGATA < 41bp 0.868701726714593 0.498916879464431 0.5816984 0.41949365 prediction 0.737403453429187 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69890890 chr14:69890891 synonymous SNV . 0 22 hPsi_associated_SNPs_3158 0 0 1 0 1 Ribosome 0.438714501865639 0.438718091118724 0.1633968 0 hPsi_site_8575 iPseU_CNN:0.1633968;iRNA_PseU:0 8576 chr15 76496111 76496111 1 + A G STAD 76496110 + 76496090 76496130 41 GTCCCAGAGCCAGCTGTGTGTATGGTCACCACGGCCGCAAT GTCCCAGAGCCAGCTGTGTGTGTGGTCACCACGGCCGCAAT < 41bp 0.870131639393407 0.501477254421283 0.2806533 0.24709517 prediction 0.737308769944248 Functional Loss - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76496110 chr15:76496111 nonsynonymous SNV 0.439 0 22 hPsi_associated_SNPs_3159 0 0 0 0 1 Nucleus 0.438597591622755 0.437917013779821 0 0 hPsi_site_8576 iPseU_CNN:0;iRNA_PseU:0 8577 chr19 4310499 4310499 1 + A G LUSC 4310498 + 4310478 4310518 41 CATGGCCCCTGCCTTCCGGCTATCATTGAAAGCGAAGGTCA CATGGCCCCTGCCTTCCGGCTGTCATTGAAAGCGAAGGTCA < 41bp 0.868653853335472 0.482284451173243 0.91218925 0.47463498 prediction 0.737307706670944 Functional Loss - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4310498 chr19:4310499 synonymous SNV . 0 22 hPsi_associated_SNPs_3160 0 0 1 0 1 cytosol 0.437241440581943 0.438424555068429 0.8243785 0 hPsi_site_8577 iPseU_CNN:0.8243785;iRNA_PseU:0 8578 chr8 75927073 75927073 1 + A G LUSC 75927072 + 75927052 75927092 41 ACTGGTGGGGCCATGCCCCTTACAAACATGGGCGGCCCTGT ACTGGTGGGGCCATGCCCCTTGCAAACATGGGCGGCCCTGT < 41bp 0.878867561503976 0.510282115023398 0.5749903 0.37972134 prediction 0.737170892961155 Functional Loss - CRISPLD1 ENSG00000121005 CDS Human protein_coding chr8:75927072 chr8:75927073 nonsynonymous SNV 0.965 4 22 hPsi_associated_SNPs_3161 0 0 0 0 2 Ribosome 0.438718801955253 0.438716871057828 0.1499806 0 hPsi_site_8578 iPseU_CNN:0.1499806;iRNA_PseU:0 8579 chr13 114287474 114287474 1 + A G LUAD 114287473 + 114287453 114287493 41 AGAGAAGAATGGCAAGGGCCTACGGCATTTCTCCATGAAGG AGAGAAGAATGGCAAGGGCCTGCGGCATTTCTCCATGAAGG < 41bp 0.874317949312195 0.505753622039746 0.22601154 0.21431336 prediction 0.737128654544897 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114287473 chr13:114287474 synonymous SNV . 0 22 hPsi_associated_SNPs_3162 0 0 1 0 1 Cytosol 0.438718592995069 0.438718592995129 0 0 hPsi_site_8579 iPseU_CNN:0;iRNA_PseU:0 8580 chr18 59221471 59221471 1 + A G UCEC 59221470 + 59221450 59221490 41 GGCGGCACCGGAAACAACCATACATCATCGACGACGAGGAA GGCGGCACCGGAAACAACCATGCATCATCGACGACGAGGAA < 41bp 0.868512417277154 0.496133893334933 0.6651829 0.2950843 prediction 0.737024834554308 Functional Loss - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59221470 chr18:59221471 nonsynonymous SNV 0.911 2 22 hPsi_associated_SNPs_3163 0 0 0 0 1 nucleus 0.438833296899044 0.439572157913194 0.3303658 0 hPsi_site_8580 iPseU_CNN:0.3303658;iRNA_PseU:0 8581 chr1 28861645 28861645 1 + A G LUSC 28861644 + 28861624 28861664 41 GCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGTGGGT GCAGCTGGATGTGCCTGTGGTGAAGGTGGCCTCAGGTGGGT < 41bp 0.884396638890665 0.515889791344201 0.47498617 0.28337142 prediction 0.737013695092927 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861644 chr1:28861645 synonymous SNV . 0 22 hPsi_associated_SNPs_3164 0 0 1 0 2 Ribosome 0.438718606640146 0.438718761182004 0 0 hPsi_site_8581 iPseU_CNN:0;iRNA_PseU:0 8582 chr16 81053811 81053811 1 + A G UCEC 81053810 + 81053790 81053830 41 ACAAACCTACCTACGTGGTGTACTACTCCCAGACTCCGTAC ACAAACCTACCTACGTGGTGTGCTACTCCCAGACTCCGTAC < 41bp 0.868442527316625 0.482403806749605 0.7002309 0.27728543 prediction 0.736885054633249 Functional Loss - CENPN ENSG00000166451 CDS Human protein_coding chr16:81053810 chr16:81053811 nonsynonymous SNV 0.026 4 22 hPsi_associated_SNPs_3165 0 0 1 0 1 Ribosome 0.438648955701225 0.43868064959902 0.4004618 0 hPsi_site_8582 iPseU_CNN:0.4004618;iRNA_PseU:0 8583 chr1 44415217 44415217 1 + A G COAD 44415216 + 44415196 44415236 41 GCTACTGCAGCCCGACAAGGTACCAGAGATCCAGTACTTTG GCTACTGCAGCCCGACAAGGTGCCAGAGATCCAGTACTTTG < 41bp 0.868373419753869 0.487179177244477 0.87652093 0.28502738 prediction 0.736746839507739 Functional Loss - IPO13 ENSG00000117408 CDS Human protein_coding chr1:44415216 chr1:44415217 synonymous SNV . 0 22 hPsi_associated_SNPs_3166 0 0 1 0 0 Ribosome 0.43744392116294 0.438379726422923 0.75304186 0 hPsi_site_8583 iPseU_CNN:0.75304186;iRNA_PseU:0 8584 chr13 113900346 113900346 1 + A G LIHC 113900345 + 113900325 113900365 41 CAATGGGCTACTGGCCAACATACACGCCCATGGAAGTGCAC CAATGGGCTACTGGCCAACATGCACGCCCATGGAAGTGCAC < 41bp 0.877430268754733 0.509069219462477 0.42089808 0.26132834 prediction 0.736722098584513 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113900345 chr13:113900346 nonsynonymous SNV 0.940 4 22 hPsi_associated_SNPs_3167 0 0 1 0 2 Cytosol 0.438719314149502 0.438718593004195 0 0 hPsi_site_8584 iPseU_CNN:0;iRNA_PseU:0 8585 chr6 116948903 116948903 1 + A G UCEC 116948902 + 116948882 116948922 41 TTTCTTGCCCTCAAGCAGCTTACTGATACCCACCCAATCCA TTTCTTGCCCTCAAGCAGCTTGCTGATACCCACCCAATCCA < 41bp 0.868325761356619 0.489407069992926 0.62639475 0.28590208 prediction 0.736651522713238 Functional Loss - RSPH4A ENSG00000111834 CDS Human protein_coding chr6:116948902 chr6:116948903 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3168 0 0 0 0 0 exosome 0.438717760499012 0.438710306500578 0.2527895 0 hPsi_site_8585 iPseU_CNN:0.2527895;iRNA_PseU:0 8586 chr15 90611280 90611280 1 + A G LUAD 90611279 + 90611259 90611299 41 GCCGCATGTGCGAGAAGTCCTACACGTCCAAGTACAACCTG GCCGCATGTGCGAGAAGTCCTGCACGTCCAAGTACAACCTG < 41bp 0.871979168848728 0.503686458766217 0.75251126 0.2590915 prediction 0.736585420165023 Functional Loss - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90611279 chr15:90611280 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3169 0 0 1 0 0 Endoplasmic reticulum 0.43955462404404 0.438726572733496 0.50502252 0 hPsi_site_8586 iPseU_CNN:0.50502252;iRNA_PseU:0 8587 chr1 11562110 11562110 1 + A G THCA 11562109 + 11562089 11562129 41 AGAGGGGCGGCAAGATCTACTATGACGGCATGGGCCAGGAC AGAGGGGCGGCAAGATCTACTGTGACGGCATGGGCCAGGAC < 41bp 0.872906560434426 0.504682061781418 0.78175217 0.34818998 prediction 0.736448997306015 Functional Loss - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11562109 chr1:11562110 nonsynonymous SNV 0.930 4 22 hPsi_associated_SNPs_3170 0 0 0 0 1 exosome 0.439173862448832 0.439159305044653 0.56350434 0 hPsi_site_8587 iPseU_CNN:0.56350434;iRNA_PseU:0 8588 chr2 173349559 173349559 1 + A G TGCT 173349558 + 173349538 173349578 41 AGAAAGAAGAAAATCTGGGCTATCCTCAAGAGTTCAGTTTC AGAAAGAAGAAAATCTGGGCTGTCCTCAAGAGTTCAGTTTC < 41bp 0.873189234773904 0.504965030938587 0.55632013 0.22313768 prediction 0.736448407670633 Functional Loss - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173349558 chr2:173349559 synonymous SNV . 0 22 hPsi_associated_SNPs_3171 0 0 1 0 1 Nucleus 0.438718565006626 0.438718477141769 0.11264026 0 hPsi_site_8588 iPseU_CNN:0.11264026;iRNA_PseU:0 8589 chr19 55814732 55814732 1 + A G UCEC 55814731 + 55814711 55814751 41 TTTTGGATCGGAAGGAGCGGTATCCCAGCTGTGAGGACCAG TTTTGGATCGGAAGGAGCGGTGTCCCAGCTGTGAGGACCAG < 41bp 0.871767093175234 0.50356983120461 0.62717557 0.3116013 prediction 0.736394523941248 Functional Loss - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55814731 chr19:55814732 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3172 0 0 0 0 2 chromatin 0.438714845119819 0.438723272987384 0.25435114 0 hPsi_site_8589 iPseU_CNN:0.25435114;iRNA_PseU:0 8590 chr7 45650072 45650072 1 + A G COAD 45650071 + 45650051 45650091 41 AGAGGATTTTCCACAAGATTTACATCCAGAGGCACGACAAT AGAGGATTTTCCACAAGATTTGCATCCAGAGGCACGACAAT < 41bp 0.867989153187478 0.496336896574791 0.57631457 0.42954206 prediction 0.735978306374957 Functional Loss - ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45650071 chr7:45650072 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3173 0 0 0 0 2 Nucleus 0.438736659094333 0.438718192780451 0.15262914 0 hPsi_site_8590 iPseU_CNN:0.15262914;iRNA_PseU:0 8591 chr12 14613631 14613631 1 + A G rs71530944 14613630 + 14613610 14613650 41 TTTGCCAGTGATTTTGCATGTACCTGTTGCAGTATCCTCCC TTTGCCAGTGATTTTGCATGTGCCTGTTGCAGTATCCTCCC < 41bp 0.871136902929992 0.503173338389744 0.5644447 0.19741458 prediction 0.735927129080496 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14613630 chr12:14613631 synonymous SNV . 0 22 hPsi_associated_SNPs_3174 0 0 1 1 0 Cytosol 0.438863612797107 0.438748644574068 0.1288894 0 hPsi_site_8591 iPseU_CNN:0.1288894;iRNA_PseU:0 8592 chr5 908157 908157 1 + A G STAD 908156 + 908136 908176 41 ATTCAGGATTTGATTGATGATAAAGACGCCCTGGTGTTCGT ATTCAGGATTTGATTGATGATGAAGACGCCCTGGTGTTCGT < 41bp 0.87471983958593 0.506764178962547 0.53644764 0.26294613 prediction 0.735911321246767 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908156 chr5:908157 nonsynonymous SNV 0.987 2 22 hPsi_associated_SNPs_3175 0 0 1 0 1 Ribosome 0.435972215273579 0.443921755402829 0.07289528 0 hPsi_site_8592 iPseU_CNN:0.07289528;iRNA_PseU:0 8593 chr2 37459346 37459346 1 + A G UCEC 37459345 + 37459325 37459365 41 GCGGCATCTTATGTACAAAATAAAGTCTACTGGTCCCATCA GCGGCATCTTATGTACAAAATGAAGTCTACTGGTCCCATCA < 41bp 0.869481540334283 0.501608449609391 0.33096007 0.3189489 prediction 0.735746181449782 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37459345 chr2:37459346 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_3176 0 0 0 1 2 chromatin 0.438718566194932 0.438681028758507 0 0 hPsi_site_8593 iPseU_CNN:0;iRNA_PseU:0 8594 chr5 145849147 145849147 1 + A G UCEC 145849146 + 145849126 145849166 41 CCCTCCTATCGTACCCATGATACATCCCCAGGTTGCTATTG CCCTCCTATCGTACCCATGATGCATCCCCAGGTTGCTATTG < 41bp 0.880061865744935 0.512365355723441 0.58816427 0.24795318 prediction 0.735393020042989 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145849146 chr5:145849147 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3177 0 0 1 0 1 Nucleus 0.438716282046841 0.438718769602719 0.17632854 0 hPsi_site_8594 iPseU_CNN:0.17632854;iRNA_PseU:0 8595 chr2 37474631 37474631 1 + A G UCEC 37474630 + 37474610 37474650 41 CCACAAGCTTCATGATGTCTTAATTGCCCCAGGAACAGCAG CCACAAGCTTCATGATGTCTTGATTGCCCCAGGAACAGCAG < 41bp 0.867667451072611 0.491452250328355 0.24040297 0.18163833 prediction 0.735334902145221 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37474630 chr2:37474631 synonymous SNV . 0 22 hPsi_associated_SNPs_3178 0 0 1 3 1 chromatin 0.438725757458565 0.438724741996598 0 0 hPsi_site_8595 iPseU_CNN:0;iRNA_PseU:0 8596 chr16 89922068 89922068 1 + A G SKCM 89922067 + 89922047 89922087 41 CACGAGCTCATCCTGGACTTTATCCGCTCACGGCCTCCACT CACGAGCTCATCCTGGACTTTGTCCGCTCACGGCCTCCACT < 41bp 0.877088749842788 0.509446490069315 0.48601297 0.26491284 prediction 0.735284519546946 Functional Loss - SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89922067 chr16:89922068 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_3179 0 0 1 0 2 Cytosol 0.438716883185393 0.438717769847949 0 0 hPsi_site_8596 iPseU_CNN:0;iRNA_PseU:0 8597 chr20 10026295 10026295 1 + A G COAD 10026294 + 10026274 10026314 41 ATGGGAACACACCACTTCATTATGCTGCCATGGGTGGTTTT ATGGGAACACACCACTTCATTGTGCTGCCATGGGTGGTTTT < 41bp 0.867616804471067 0.488523470130912 0.42493516 0.2613241 prediction 0.735233608942135 Functional Loss - ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10026294 chr20:10026295 nonsynonymous SNV 0.969 3 22 hPsi_associated_SNPs_3180 0 0 0 0 2 membrane 0.438763561705335 0.438734314636833 0 0 hPsi_site_8597 iPseU_CNN:0;iRNA_PseU:0 8598 chr22 42209387 42209387 1 + A G LUAD 42209386 + 42209366 42209406 41 AACCTCCTCATCCGCTGGGGTATCAGTTTCTGCAACCAGAC AACCTCCTCATCCGCTGGGGTGTCAGTTTCTGCAACCAGAC < 41bp 0.877497581064544 0.509890675151686 0.3387153 0.22278133 prediction 0.735213811825715 Functional Loss - CCDC134 ENSG00000100147 CDS Human protein_coding chr22:42209386 chr22:42209387 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3181 0 0 1 0 1 Ribosome 0.438718884745502 0.438724710432658 0 0 hPsi_site_8598 iPseU_CNN:0;iRNA_PseU:0 8599 chr4 151153904 151153904 1 + A G LGG 151153903 + 151153883 151153923 41 GAGATGGCAGTGCCATGGTGTACAACTTAGCCAATGCCCTC GAGATGGCAGTGCCATGGTGTGCAACTTAGCCAATGCCCTC < 41bp 0.882734036375613 0.515158943095614 0.76577675 0.33384383 prediction 0.735150186559997 Functional Loss - DCLK2 ENSG00000170390 CDS Human protein_coding chr4:151153903 chr4:151153904 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3182 0 0 0 1 1 Nucleus 0.438718612654206 0.438718592725086 0.5315535 0 hPsi_site_8599 iPseU_CNN:0.5315535;iRNA_PseU:0 8600 chr11 75718629 75718629 1 + A G OV 75718628 + 75718608 75718648 41 GACAATTCGTTGCAGGCAGTTACTCTCTGAGCTTTCCTACA GACAATTCGTTGCAGGCAGTTGCTCTCTGAGCTTTCCTACA < 41bp 0.867539803481456 0.492761874479185 0.78003097 0.3294356 prediction 0.735079606962911 Functional Loss - UVRAG ENSG00000198382 CDS Human protein_coding chr11:75718628 chr11:75718629 synonymous SNV . 0 22 hPsi_associated_SNPs_3183 0 0 1 5 2 Ribosome 0.43884039574371 0.438747515402773 0.56006194 0 hPsi_site_8600 iPseU_CNN:0.56006194;iRNA_PseU:0 8601 chr4 8608555 8608555 1 + A G CESC 8608554 + 8608534 8608574 41 CGGACCTGACGTCCGAGTACTACCGGCTGGCGGAGACCCGC CGGACCTGACGTCCGAGTACTGCCGGCTGGCGGAGACCCGC < 41bp 0.875194415472479 0.507720109418571 0.70543176 0.28755093 prediction 0.734948612107817 Functional Loss - CPZ ENSG00000109625 CDS Human protein_coding chr4:8608554 chr4:8608555 nonsynonymous SNV 0.611 3 22 hPsi_associated_SNPs_3184 0 0 1 0 1 Endoplasmic reticulum 0.435651267757795 0.438041057912074 0.41086352 0 hPsi_site_8601 iPseU_CNN:0.41086352;iRNA_PseU:0 8602 chr6 52960336 52960336 1 + A G ESCA 52960335 + 52960315 52960355 41 CACTTGACTATAAATACAGATATTTTCGTCGTGTCCCTGTA CACTTGACTATAAATACAGATGTTTTCGTCGTGTCCCTGTA < 41bp 0.871896946335053 0.504434477708068 0.26440483 0.20536685 prediction 0.734924937253969 Functional Loss - FBXO9 ENSG00000112146 CDS Human protein_coding chr6:52960335 chr6:52960336 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3185 0 0 1 0 1 Cytosol 0.438697707939611 0.438719247290035 0 0 hPsi_site_8602 iPseU_CNN:0;iRNA_PseU:0 8603 chr7 123302638 123302638 1 + A G UCEC 123302637 + 123302617 123302657 41 CGACGCTGCTGAGGCTGGGATACCATTTTGAACTCCCAGGA CGACGCTGCTGAGGCTGGGATGCCATTTTGAACTCCCAGGA < 41bp 0.867440683138697 0.49823743029172 0.23108426 0.20858717 prediction 0.734881366277395 Functional Loss - LMOD2 ENSG00000170807 CDS Human protein_coding chr7:123302637 chr7:123302638 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_3186 0 0 0 0 0 exosome 0.438718592135158 0.438718582720314 0 0 hPsi_site_8603 iPseU_CNN:0;iRNA_PseU:0 8604 chr5 170819773 170819773 1 + A G LUAD 170819772 + 170819752 170819792 41 GAGGATGTGAAACTCTTAAGTATATCTGGAAAGCGGTCTGC GAGGATGTGAAACTCTTAAGTGTATCTGGAAAGCGGTCTGC < 41bp 0.873693199669882 0.506257093285488 0.41663444 0.29794466 prediction 0.734872212768789 Functional Loss - NPM1 ENSG00000181163 CDS Human protein_coding chr5:170819772 chr5:170819773 nonsynonymous SNV 0.856 0 22 hPsi_associated_SNPs_3187 0 0 1 0 2 Ribosome 0.438718592971101 0.438718570659408 0 0 hPsi_site_8604 iPseU_CNN:0;iRNA_PseU:0 8605 chr7 158706985 158706985 1 + A G UCEC 158706984 + 158706964 158707004 41 AAAGATTGATACTCCAAGGTTATGTAGCTTTCTGCGGGCTG AAAGATTGATACTCCAAGGTTGTGTAGCTTTCTGCGGGCTG < 41bp 0.867404396007743 0.492913219743226 0.3317539 0.25277245 prediction 0.734808792015486 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158706984 chr7:158706985 synonymous SNV . 0 22 hPsi_associated_SNPs_3188 0 0 1 3 2 Nucleus 0.438669562166581 0.438617470021305 0 0 hPsi_site_8605 iPseU_CNN:0;iRNA_PseU:0 8606 chr22 50649062 50649062 1 + A G COAD 50649061 + 50649041 50649081 41 CTCTTGCCCCGTGTGGCAGGTACGACCCCGACCACGTGTGC CTCTTGCCCCGTGTGGCAGGTGCGACCCCGACCACGTGTGC < 41bp 0.878365154328723 0.510965876937185 0.96078557 0.6529004 prediction 0.734798554783076 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649061 chr22:50649062 unknown 0.751 4 22 hPsi_associated_SNPs_3189 0 0 1 0 1 Nucleus 0.438716900628301 0.438718865936758 0.61577034 0 hPsi_site_8606 iPseU_CNN:0.61577034;iRNA_PseU:0 8607 chr17 21319743 21319743 1 + A G LIHC 21319742 + 21319722 21319762 41 CTGCAGTGCGAAGGATCTGGTAGAGAACAAGTTCCTGCTGC CTGCAGTGCGAAGGATCTGGTGGAGAACAAGTTCCTGCTGC < 41bp 0.867337458453203 0.49129609017583 0.6643101 0.29439613 prediction 0.734674916906405 Functional Loss - KCNJ12;KCNJ18 ENSG00000184185 CDS Human protein_coding chr17:21319742 chr17:21319743 synonymous SNV . 0 22 hPsi_associated_SNPs_3190 0 0 0 0 0 unknown 0.438723438325336 0.438718305641001 0.3286202 0 hPsi_site_8607 iPseU_CNN:0.3286202;iRNA_PseU:0 8608 chr1 110171739 110171739 1 + A G UCEC 110171738 + 110171718 110171758 41 GTCTCACCTGCAGTGATGTGTACCGTACCAAGGGCCAGCTG GTCTCACCTGCAGTGATGTGTGCCGTACCAAGGGCCAGCTG < 41bp 0.873278750681491 0.505959349013679 0.75735533 0.3962621 prediction 0.734638803335624 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110171738 chr1:110171739 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_3191 0 0 1 0 1 Cytosol 0.438714752232508 0.438717582966343 0.51471066 0 hPsi_site_8608 iPseU_CNN:0.51471066;iRNA_PseU:0 8609 chr9 35660818 35660818 1 + T C rs533224381 35660819 - 35660799 35660839 41 CATATCCTTGTCCGGCTTGCTATCTTGCAGCAGCTCGTGGA CATATCCTTGTCCGGCTTGCTGTCTTGCAGCAGCTCGTGGA < 41bp 0.867314304217127 0.49067049423001 0.633754 0.27897793 prediction 0.734628608434253 Functional Loss - CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660819 chr9:35660818 stoploss 0.002 0 22 hPsi_associated_SNPs_3192 0 0 0 0 0 Endoplasmic reticulum 0.439663268225005 0.439550388998985 0.267508 0 hPsi_site_8609 iPseU_CNN:0.267508;iRNA_PseU:0 8610 chr9 75775209 75775209 1 + A G CESC 75775208 + 75775188 75775228 41 GAAACACTGAAGAAAGCCCTTACAGGTCACCTTGAGGAGGT GAAACACTGAAGAAAGCCCTTGCAGGTCACCTTGAGGAGGT < 41bp 0.867196419433682 0.490889164659353 0.68011236 0.29525214 prediction 0.734392838867365 Functional Loss - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75775208 chr9:75775209 nonsynonymous SNV 0.882 1 22 hPsi_associated_SNPs_3193 0 0 1 0 2 Cytosol 0.438718646698662 0.438718593542056 0.36022472 0 hPsi_site_8610 iPseU_CNN:0.36022472;iRNA_PseU:0 8611 chr20 1108118 1108118 1 + A G COAD 1108117 + 1108097 1108137 41 TGACCCTGAACTTGGATGATTATATCGATGCAGAACACCTG TGACCCTGAACTTGGATGATTGTATCGATGCAGAACACCTG < 41bp 0.877854713128678 0.510659965356872 0.6112947 0.64098614 prediction 0.734389495543612 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1108117 chr20:1108118 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3194 0 0 1 0 2 Ribosome 0.438648774258748 0.438753639223656 0 0 hPsi_site_8611 iPseU_CNN:0;iRNA_PseU:0 8612 chr11 71698079 71698079 1 + A G HNSC 71698078 + 71698058 71698098 41 ATAAGTGGTTCCTGCTAATCTATAAAATCAGCTATGCCACT ATAAGTGGTTCCTGCTAATCTGTAAAATCAGCTATGCCACT < 41bp 0.867153545348034 0.487974508121836 0.21149138 0.18391159 prediction 0.734307090696067 Functional Loss - RNF121 ENSG00000137522 CDS Human protein_coding chr11:71698078 chr11:71698079 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3195 0 0 1 0 2 Nucleus 0.438718570595182 0.438718125968065 0 0 hPsi_site_8612 iPseU_CNN:0;iRNA_PseU:0 8613 chr19 57931188 57931188 1 + A G UCEC 57931187 + 57931167 57931207 41 GACGGAACACACCCCAAGCGTACAGCCAAGCTTTACCTGCA GACGGAACACACCCCAAGCGTGCAGCCAAGCTTTACCTGCA < 41bp 0.869200638073677 0.502126644037088 0.64945036 0.29954094 prediction 0.734147988073177 Functional Loss - ZNF17 ENSG00000186272;ENSG00000269533 CDS Human other chr19:57931187 chr19:57931188 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3196 0 0 0 0 0 nucleus 0.438727719449348 0.438719337866712 0.29890072 0 hPsi_site_8613 iPseU_CNN:0.29890072;iRNA_PseU:0 8614 chr16 14026071 14026071 1 + A G rs145851520 14026070 + 14026050 14026090 41 TAAATGCTCGAGCAAGGGTTTATCATCTTCCAGATGCCAAA TAAATGCTCGAGCAAGGGTTTGTCATCTTCCAGATGCCAAA < 41bp 0.867073545291042 0.4965446977818 0.35452098 0.3126915 prediction 0.734147090582085 Functional Loss - ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14026070 chr16:14026071 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_3197 0 0 1 0 2 Nucleus 0.438718140045327 0.438718518226712 0 0 hPsi_site_8614 iPseU_CNN:0;iRNA_PseU:0 8615 chr16 2120500 2120500 1 + A G LUAD 2120499 + 2120479 2120519 41 CAAGCCACGCCACGCGTGTGTATGAGATGCTGGTCAGCCAC CAAGCCACGCCACGCGTGTGTGTGAGATGCTGGTCAGCCAC < 41bp 0.874271422500063 0.507204264449195 0.75257313 0.37753725 prediction 0.734134316101737 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2120499 chr16:2120500 nonsynonymous SNV 0.104 5 22 hPsi_associated_SNPs_3198 0 0 1 0 2 Endoplasmic reticulum 0.438959009680907 0.441715487338085 0.50514626 0 hPsi_site_8615 iPseU_CNN:0.50514626;iRNA_PseU:0 8616 chr9 80919820 80919820 1 + A G HNSC 80919819 + 80919799 80919839 41 GAAGCCAAGAAGTTTGGGACTATAAATATCGTTCACCCTAA GAAGCCAAGAAGTTTGGGACTGTAAATATCGTTCACCCTAA < 41bp 0.867047211683253 0.496910676212402 0.4933656 0.23822385 prediction 0.734094423366506 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80919819 chr9:80919820 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_3199 0 0 1 0 1 Ribosome 0.438717887549137 0.438718365097947 0 0 hPsi_site_8616 iPseU_CNN:0;iRNA_PseU:0 8617 chr1 2087448 2087448 1 + A G GBM 2087447 + 2087427 2087467 41 ATTTCAGGATATTGACTGGGTACAGACAGAGAAGCACGTGT ATTTCAGGATATTGACTGGGTGCAGACAGAGAAGCACGTGT < 41bp 0.867016460639566 0.491359192328363 0.35326904 0.25249732 prediction 0.734032921279132 Functional Loss - PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2087447 chr1:2087448 synonymous SNV . 0 22 hPsi_associated_SNPs_3200 0 0 0 0 2 Ribosome 0.431588580092823 0.322103804387758 0 0 hPsi_site_8617 iPseU_CNN:0;iRNA_PseU:0 8618 chr5 110097150 110097150 1 + A G SKCM 110097149 + 110097129 110097169 41 AGCACTAGCCCTGTGCAGAGTATGTTGGATGCTTATTTTCC AGCACTAGCCCTGTGCAGAGTGTGTTGGATGCTTATTTTCC < 41bp 0.866961514247339 0.499366900328792 0.31709018 0.21102616 prediction 0.733923028494678 Functional Loss - SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097149 chr5:110097150 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3201 0 0 1 0 0 Cytosol 0.438719382763249 0.438713639774089 0 0 hPsi_site_8618 iPseU_CNN:0;iRNA_PseU:0 8619 chr11 118944604 118944604 1 + A G LUSC 118944603 + 118944583 118944623 41 TGGCCCAGATTTTCATGCAGTATGGAGACCATCTCTACAGC TGGCCCAGATTTTCATGCAGTGTGGAGACCATCTCTACAGC < 41bp 0.866915741947592 0.489208711882005 0.5945805 0.3013842 prediction 0.733831483895185 Functional Loss - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118944603 chr11:118944604 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3202 0 0 1 0 2 cytosol 0.438718592054527 0.438718591050587 0.189161 0 hPsi_site_8619 iPseU_CNN:0.189161;iRNA_PseU:0 8620 chr5 79366895 79366895 1 + A G UCEC 79366894 + 79366874 79366914 41 CAAAGGAACAGCGATAAAGATATCTTTGGGGATGCCTGTGA CAAAGGAACAGCGATAAAGATGTCTTTGGGGATGCCTGTGA < 41bp 0.872888439073548 0.506013314861679 0.45989203 0.26859307 prediction 0.733750248423739 Functional Loss - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79366894 chr5:79366895 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_3203 0 0 0 0 1 exosome 0.438435033248556 0.438713088289469 0 0 hPsi_site_8620 iPseU_CNN:0;iRNA_PseU:0 8621 chr19 40710483 40710483 1 + A G UCEC 40710482 + 40710462 40710502 41 GCGTATGGCGTGGCTATGAATAAGCTGACGCTGCCCATTCC GCGTATGGCGTGGCTATGAATGAGCTGACGCTGCCCATTCC < 41bp 0.866848289028024 0.498323681558515 0.7316168 0.3589757 prediction 0.733696578056049 Functional Loss - MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40710482 chr19:40710483 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3204 0 0 1 0 1 Endoplasmic reticulum 0.438717735089083 0.440968282800051 0.4632336 0 hPsi_site_8621 iPseU_CNN:0.4632336;iRNA_PseU:0 8622 chr1 11808623 11808623 1 + A G HNSC 11808622 + 11808602 11808642 41 CGCTCTCCTGCTGCTTCGTCTACCACATGTACCGGGAGCGC CGCTCTCCTGCTGCTTCGTCTGCCACATGTACCGGGAGCGC < 41bp 0.866767325732953 0.494427833848404 0.35329652 0.24027067 prediction 0.733534651465907 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11808622 chr1:11808623 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_3205 0 0 1 0 2 Ribosome 0.438664926502563 0.438925474440844 0 0 hPsi_site_8622 iPseU_CNN:0;iRNA_PseU:0 8623 chr14 23075411 23075411 1 + A G UCEC 23075410 + 23075390 23075430 41 GATGATACCATATCAGAGTATATTTACCACTGCAACGCACA GATGATACCATATCAGAGTATGTTTACCACTGCAACGCACA < 41bp 0.879477989955315 0.512712114160309 0.77681774 0.53627235 prediction 0.733531751590012 Functional Loss - ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23075410 chr14:23075411 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3206 0 0 0 0 2 cytosol 0.438650219302801 0.438399140752167 0.48109078 0 hPsi_site_8623 iPseU_CNN:0.48109078;iRNA_PseU:0 8624 chr22 18028504 18028504 1 + A G BLCA 18028503 + 18028483 18028523 41 ATTCTGGAGGCTTTCCCCGGTATCGCCCCCCACAAGGAATG ATTCTGGAGGCTTTCCCCGGTGTCGCCCCCCACAAGGAATG < 41bp 0.888167052894765 0.521405980393437 0.6514447 0.2777713 prediction 0.733522145002657 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18028503 chr22:18028504 nonsynonymous SNV 0.761 4 22 hPsi_associated_SNPs_3207 0 0 1 0 0 nucleoplasm 0.438718593272219 0.438718592960981 0.3028894 0 hPsi_site_8624 iPseU_CNN:0.3028894;iRNA_PseU:0 8625 chr10 122630801 122630801 1 + A G UCEC 122630800 + 122630780 122630820 41 GCACCACAGTTTGCTATTCGTATGTGTCCACCGTTGACCAC GCACCACAGTTTGCTATTCGTGTGTGTCCACCGTTGACCAC < 41bp 0.866686912678277 0.492560737936827 0.44161105 0.2904484 prediction 0.733373825356554 Functional Loss - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122630800 chr10:122630801 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_3208 0 0 1 0 2 Nucleus 0.438551916936755 0.438644365304657 0 0 hPsi_site_8625 iPseU_CNN:0;iRNA_PseU:0 8626 chr16 67037035 67037035 1 + A G rs61744392 67037034 + 67037014 67037054 41 TTCCCAGAGTGGCACCGCGTTATTCAGACTTTTCATCACTA TTCCCAGAGTGGCACCGCGTTGTTCAGACTTTTCATCACTA < 41bp 0.866640891635332 0.482622247499866 0.67537314 0.5073404 prediction 0.733281783270665 Functional Loss - CES4A ENSG00000172824 CDS Human protein_coding chr16:67037034 chr16:67037035 synonymous SNV . 0 22 hPsi_associated_SNPs_3209 0 0 0 0 2 exosome 0.438718233207675 0.438726886558447 0.33606548 0 hPsi_site_8626 iPseU_CNN:0.33606548;iRNA_PseU:0 8627 chrX 69366575 69366575 1 + A G UCEC 69366574 + 69366554 69366594 41 ATGATGAGCGTGTTCGTGAATATTATCTTCTTCACCTTCAG ATGATGAGCGTGTTCGTGAATGTTATCTTCTTCACCTTCAG < 41bp 0.871919784807674 0.505308535512972 0.49471268 0.52124554 prediction 0.733222498589403 Functional Loss - IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69366574 chrX:69366575 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_3210 0 0 0 0 1 Cytosol 0.438719667727216 0.438718495358714 0 0 hPsi_site_8627 iPseU_CNN:0;iRNA_PseU:0 8628 chr17 42978443 42978443 1 + A G UCEC 42978442 + 42978422 42978462 41 CACTCACTGCTGATGAGAAGTACAAACGGGAGAATGCTGCC CACTCACTGCTGATGAGAAGTGCAAACGGGAGAATGCTGCC < 41bp 0.866594146733172 0.482377463273571 0.34412968 0.23081896 prediction 0.733188293466344 Functional Loss - CCDC103 ENSG00000167131 CDS Human protein_coding chr17:42978442 chr17:42978443 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3211 0 0 0 0 2 exosome 0.438713245895175 0.438429990923681 0 0 hPsi_site_8628 iPseU_CNN:0;iRNA_PseU:0 8629 chrX 47030610 47030610 1 + A G PRAD 47030609 + 47030589 47030629 41 GAGGAGGAGGAGAAGGCCAGTAACATCGTCATGCTGAGGAT GAGGAGGAGGAGAAGGCCAGTGACATCGTCATGCTGAGGAT < 41bp 0.869578427543594 0.502997058608491 0.33581477 0.26594627 prediction 0.733162737870205 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47030609 chrX:47030610 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3212 0 0 1 0 1 Ribosome 0.438718592997988 0.438741837012608 0 0 hPsi_site_8629 iPseU_CNN:0;iRNA_PseU:0 8630 chr14 105821453 105821453 1 + A G LUSC 105821452 + 105821432 105821472 41 TGCTGCAGCGCAGAAAGCGCTACAAGAACAGAACCATCCTG TGCTGCAGCGCAGAAAGCGCTGCAAGAACAGAACCATCCTG < 41bp 0.866556778548553 0.488170401637601 0.83596873 0.3726887 prediction 0.733113557097106 Functional Loss - PACS2 ENSG00000179364 CDS Human protein_coding chr14:105821452 chr14:105821453 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_3213 0 0 1 0 2 Cytosol 0.438711232117581 0.438721752744492 0.67193746 0 hPsi_site_8630 iPseU_CNN:0.67193746;iRNA_PseU:0 8631 chr11 67200464 67200464 1 + A G rs561356524 67200463 + 67200443 67200483 41 TTTGGACTCTGCAAGGAGTCTATCCATGAGGGCGCCGTCAC TTTGGACTCTGCAAGGAGTCTGTCCATGAGGGCGCCGTCAC < 41bp 0.87590600576818 0.509367497852753 0.27144253 0.1896424 prediction 0.733077015830853 Functional Loss - RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67200463 chr11:67200464 nonsynonymous SNV 0.785 1 22 hPsi_associated_SNPs_3214 0 0 1 1 1 Ribosome 0.439528509608334 0.438675066203663 0 0 hPsi_site_8631 iPseU_CNN:0;iRNA_PseU:0 8632 chr6 99283608 99283608 1 + A G COAD 99283607 + 99283587 99283627 41 CGGCGGATCAAACTGGGATTTACCCAAGCGGACGTGGGGCT CGGCGGATCAAACTGGGATTTGCCCAAGCGGACGTGGGGCT < 41bp 0.870795666791477 0.504259419126827 0.44520447 0.2698476 prediction 0.733072495329299 Functional Loss - POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283607 chr6:99283608 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3215 0 0 1 0 0 exosome 0.438718572423855 0.438718592881775 0 0 hPsi_site_8632 iPseU_CNN:0;iRNA_PseU:0 8633 chr17 61769682 61769682 1 + A G rs144796639 61769681 + 61769661 61769701 41 AAACGCCTGCAGACGATCTGTATGTCGGGGACGGGCATGCG AAACGCCTGCAGACGATCTGTGTGTCGGGGACGGGCATGCG < 41bp 0.866516988757936 0.473444748335246 0.69453484 0.3470958 prediction 0.733033977515871 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61769681 chr17:61769682 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_3216 0 0 1 0 2 Cytosol 0.438607020320815 0.437965594923737 0.38906968 0 hPsi_site_8633 iPseU_CNN:0.38906968;iRNA_PseU:0 8634 chr11 64695286 64695286 1 + A G UCEC 64695285 + 64695265 64695305 41 GCCACTCAGATCTCAGTGAATATCTTCCGGACTCTGCCGCC GCCACTCAGATCTCAGTGAATGTCTTCCGGACTCTGCCGCC < 41bp 0.866286323894555 0.484902863702853 0.7330489 0.3928049 prediction 0.73257264778911 Functional Loss - PPP2R5B ENSG00000068971 CDS Human protein_coding chr11:64695285 chr11:64695286 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3217 0 0 1 0 2 Ribosome 0.438718597147239 0.438718595534212 0.4660978 0 hPsi_site_8634 iPseU_CNN:0.4660978;iRNA_PseU:0 8635 chr12 56619991 56619991 1 + A G LIHC 56619990 + 56619970 56620010 41 ATGGTTTATTCTGAGGTTCCTAACTTCAGTGAGCCAAACCC ATGGTTTATTCTGAGGTTCCTGACTTCAGTGAGCCAAACCC < 41bp 0.87336272640506 0.507149760768422 0.40447873 0.26898748 prediction 0.732425931273276 Functional Loss - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56619990 chr12:56619991 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3218 0 0 1 0 2 Ribosome 0.438718592984918 0.438718592995103 0 0 hPsi_site_8635 iPseU_CNN:0;iRNA_PseU:0 8636 chr19 35940885 35940885 1 + A G STAD 35940884 + 35940864 35940904 41 CCCTCACGAGTTTTGGCTTCTACAGCAGCATCTACTGCAGC CCCTCACGAGTTTTGGCTTCTGCAGCAGCATCTACTGCAGC < 41bp 0.868322332464005 0.502137899040318 0.608256 0.3947361 prediction 0.732368866847372 Functional Loss - FFAR2 ENSG00000126262 CDS Human protein_coding chr19:35940884 chr19:35940885 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3219 0 0 0 0 0 exosome 0.438768002741279 0.438718877500097 0.216512 0 hPsi_site_8636 iPseU_CNN:0.216512;iRNA_PseU:0 8637 chrX 11781098 11781098 1 + A G COAD 11781097 + 11781077 11781117 41 ATGCCAACATGAACGTGCATTATATCCCAGCAGAAAAGAAG ATGCCAACATGAACGTGCATTGTATCCCAGCAGAAAAGAAG < 41bp 0.871953289990048 0.505797458036126 0.42053944 0.32285634 prediction 0.732311663907845 Functional Loss - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11781097 chrX:11781098 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3220 0 0 1 0 1 Cytosol 0.438420853706588 0.438643126903975 0 0 hPsi_site_8637 iPseU_CNN:0;iRNA_PseU:0 8638 chr1 52747446 52747446 1 + A G rs149699758 52747445 + 52747425 52747465 41 GAAAAGTGTTTGCCAAAGGATATCTTTAATCACTTTGTGCA GAAAAGTGTTTGCCAAAGGATGTCTTTAATCACTTTGTGCA < 41bp 0.867070915532925 0.500932700010506 0.40298623 0.2286345 prediction 0.732276431044837 Functional Loss - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52747445 chr1:52747446 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_3221 0 0 1 0 1 Ribosome 0.43870794747468 0.438721924760893 0 0 hPsi_site_8638 iPseU_CNN:0;iRNA_PseU:0 8639 chr16 54967577 54967577 1 + A G ESCA 54967576 + 54967556 54967596 41 TCTATCCCGGCTACACGAACTATGGCTCCTTCGGACACCTT TCTATCCCGGCTACACGAACTGTGGCTCCTTCGGACACCTT < 41bp 0.874075577931584 0.507966165021918 0.56812346 0.40785486 prediction 0.732218825819332 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967576 chr16:54967577 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3222 0 0 1 0 0 exosome 0.438718523938793 0.438718442384553 0.13624692 0 hPsi_site_8639 iPseU_CNN:0.13624692;iRNA_PseU:0 8640 chr1 43917505 43917505 1 + T C STAD 43917506 - 43917486 43917526 41 TCTTACAGCGGCAGCCATCTTACAGAAGGTAGGAAGACCCA TCTTACAGCGGCAGCCATCTTGCAGAAGGTAGGAAGACCCA < 41bp 0.866085239110986 0.491557049604431 0.566773 0.25994262 prediction 0.732170478221972 Functional Loss - HYI ENSG00000178922 CDS Human protein_coding chr1:43917506 chr1:43917505 synonymous SNV . 0 22 hPsi_associated_SNPs_3223 0 0 1 0 2 Ribosome 0.438718586761936 0.438718759056584 0.133546 0 hPsi_site_8640 iPseU_CNN:0.133546;iRNA_PseU:0 8641 chr19 44635831 44635831 1 + A G THCA 44635830 + 44635810 44635850 41 AATGTGGAAAACGCTTCATTTATAGGCAAGATCTTTATAAG AATGTGGAAAACGCTTCATTTGTAGGCAAGATCTTTATAAG < 41bp 0.866072075812466 0.499549157792421 0.4613243 0.2892268 prediction 0.732144151624933 Functional Loss - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44635830 chr19:44635831 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_3224 0 0 0 0 0 exosome 0.43909976466555 0.438731144996195 0 0 hPsi_site_8641 iPseU_CNN:0;iRNA_PseU:0 8642 chr10 115485138 115485138 1 + A G UCEC 115485137 + 115485117 115485157 41 GCAGCTTCTGAAGAGGACCATACAAATGCCGCCTGCTTCGC GCAGCTTCTGAAGAGGACCATGCAAATGCCGCCTGCTTCGC < 41bp 0.866019146054312 0.480818753029765 0.39297536 0.27307662 prediction 0.732038292108623 Functional Loss - CASP7 ENSG00000165806 CDS Human protein_coding chr10:115485137 chr10:115485138 nonsynonymous SNV 0.969 1 22 hPsi_associated_SNPs_3225 0 0 1 0 2 Ribosome 0.438689741770382 0.438718667249816 0 0 hPsi_site_8642 iPseU_CNN:0;iRNA_PseU:0 8643 chrX 70444069 70444069 1 + A G UCEC 70444068 + 70444048 70444088 41 GGCTGGTCAAGTGCGACGTCTACCCCTGCCCCAACACAGTG GGCTGGTCAAGTGCGACGTCTGCCCCTGCCCCAACACAGTG < 41bp 0.879167078676163 0.513154455641469 0.3348243 0.21482813 prediction 0.732025246069388 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444068 chrX:70444069 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_3226 0 0 1 0 0 Endoplasmic reticulum 0.438717842019117 0.438718592934213 0 0 hPsi_site_8643 iPseU_CNN:0;iRNA_PseU:0 8644 chr1 11779682 11779682 1 + A G BLCA 11779681 + 11779661 11779701 41 TTCCACCGGAACCGCAGGGTTACACGGAGGAAAGGGCGCTG TTCCACCGGAACCGCAGGGTTGCACGGAGGAAAGGGCGCTG < 41bp 0.865979124346337 0.498267037694517 0.65004396 0.14728388 prediction 0.731958248692675 Functional Loss - DRAXIN ENSG00000162490 CDS Human protein_coding chr1:11779681 chr1:11779682 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_3227 0 0 0 0 1 exosome 0.438718951248508 0.438733209274916 0.30008792 0 hPsi_site_8644 iPseU_CNN:0.30008792;iRNA_PseU:0 8645 chr7 101952159 101952159 1 + A G rs368206311 101952158 + 101952138 101952178 41 TCTGCAGAAGCACTCGTGGGTAGCTGACATCCAGGGCTGCG TCTGCAGAAGCACTCGTGGGTGGCTGACATCCAGGGCTGCG < 41bp 0.865978538987395 0.48545057360077 0.90225625 0.31282115 prediction 0.731957077974789 Functional Loss - SH2B2 ENSG00000160999 CDS Human protein_coding chr7:101952158 chr7:101952159 synonymous SNV . 0 22 hPsi_associated_SNPs_3228 0 0 0 0 2 nucleoplasm 0.438655589968708 0.438718707837781 0.8045125 0 hPsi_site_8645 iPseU_CNN:0.8045125;iRNA_PseU:0 8646 chr3 129007814 129007814 1 + A G UCEC 129007813 + 129007793 129007833 41 ACTACCAACTGTCGTAGTGATACCGTAATGGAGAAACGGTC ACTACCAACTGTCGTAGTGATGCCGTAATGGAGAAACGGTC < 41bp 0.873320056127367 0.507438113804827 0.2160525 0.14224035 prediction 0.731763884645081 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:129007813 chr3:129007814 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3229 0 0 0 0 1 Ribosome 0.43871875638618 0.438718773726972 0 0 hPsi_site_8646 iPseU_CNN:0;iRNA_PseU:0 8647 chr12 8197435 8197435 1 + A G HNSC 8197434 + 8197414 8197454 41 CTGAGGGTCCCCCTCCCCTCTATAACACCAACCATGACTTT CTGAGGGTCCCCCTCCCCTCTGTAACACCAACCATGACTTT < 41bp 0.885657151520469 0.519784369164537 0.6273127 0.50239813 prediction 0.731745564711863 Functional Loss - FOXJ2 ENSG00000065970 CDS Human protein_coding chr12:8197434 chr12:8197435 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3230 0 0 0 0 1 nucleoplasm 0.438718628183215 0.438718738050565 0.24982914 0 hPsi_site_8647 iPseU_CNN:0.24982914;iRNA_PseU:0 8648 chr7 12666306 12666306 1 + A G UCEC 12666305 + 12666285 12666325 41 GTGATGGCTTCGGGAAAGTTTATGTCACAGAGAAAGTGGCT GTGATGGCTTCGGGAAAGTTTGTGTCACAGAGAAAGTGGCT < 41bp 0.865866698625827 0.480286618577573 0.40015495 0.47896108 prediction 0.731733397251654 Functional Loss - SCIN ENSG00000006747 CDS Human protein_coding chr7:12666305 chr7:12666306 nonsynonymous SNV 0.484 2 22 hPsi_associated_SNPs_3231 0 0 0 0 1 nucleolus 0.438724756845739 0.438732895053346 0 0 hPsi_site_8648 iPseU_CNN:0;iRNA_PseU:0 8649 chr17 16326837 16326837 1 + A G LUAD 16326836 + 16326816 16326856 41 AGCAGTGGGATGTGGTAAGCTACCTCCTGGAGAACCCACAC AGCAGTGGGATGTGGTAAGCTGCCTCCTGGAGAACCCACAC < 41bp 0.865788229287289 0.479091670822178 0.7545123 0.19425356 prediction 0.731576458574578 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16326836 chr17:16326837 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3232 0 0 1 0 1 Endoplasmic reticulum 0.440934493790513 0.438289182818498 0.5090246 0 hPsi_site_8649 iPseU_CNN:0.5090246;iRNA_PseU:0 8650 chr8 133829724 133829724 1 + A G STAD 133829723 + 133829703 133829743 41 CCCAGGGCAGAAAAAGAGGATACACAGATGCTTCCAAATCC CCCAGGGCAGAAAAAGAGGATGCACAGATGCTTCCAAATCC < 41bp 0.865782353557243 0.494454914669035 0.62569344 0.2587063 prediction 0.731564707114485 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133829723 chr8:133829724 nonsynonymous SNV 0.328 0 22 hPsi_associated_SNPs_3233 0 0 1 0 1 Nucleus 0.438718594381935 0.438719154340603 0.25138688 0 hPsi_site_8650 iPseU_CNN:0.25138688;iRNA_PseU:0 8651 chr5 176471435 176471435 1 + A G UCEC 176471434 + 176471414 176471454 41 AACCAGTGCTGCCCCATCTGTAACATGACCTTTTCCTCCCC AACCAGTGCTGCCCCATCTGTGACATGACCTTTTCCTCCCC < 41bp 0.865776809641424 0.487662994160623 0.60259455 0.3567962 prediction 0.731553619282848 Functional Loss - ZNF346 ENSG00000113761 CDS Human protein_coding chr5:176471434 chr5:176471435 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3234 0 0 1 0 3 chromatin 0.438718593009729 0.439366159383732 0.2051891 0 hPsi_site_8651 iPseU_CNN:0.2051891;iRNA_PseU:0 8652 chr2 29135492 29135492 1 + A G LUAD 29135491 + 29135471 29135511 41 CAATAGCAGTGTCAGTTCCCTATGTATCAGCCCAGATGGAA CAATAGCAGTGTCAGTTCCCTGTGTATCAGCCCAGATGGAA < 41bp 0.872749835536076 0.507004070741913 0.30384558 0.26981908 prediction 0.731491529588327 Functional Loss - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29135491 chr2:29135492 synonymous SNV . 0 22 hPsi_associated_SNPs_3235 0 0 1 0 1 Ribosome 0.437346863116274 0.438665354456143 0 0 hPsi_site_8652 iPseU_CNN:0;iRNA_PseU:0 8653 chr2 48718209 48718209 1 + A G rs149438258 48718208 + 48718188 48718228 41 ACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGT ACTTCATTGCTTCACTGAGCTGTGGACCTAAGGCAGCGAGT < 41bp 0.878038792188172 0.512300373760891 0.29926527 0.23892024 prediction 0.731476836854561 Functional Loss - PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48718208 chr2:48718209 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_3236 0 0 1 0 1 Cytosol 0.438749381527005 0.439735250810833 0 0 hPsi_site_8653 iPseU_CNN:0;iRNA_PseU:0 8654 chr10 12203044 12203044 1 + A G SARC 12203043 + 12203023 12203063 41 ATCCTGTCCATGTCGTTGTTTATATCATCTTCATGTTGGGG ATCCTGTCCATGTCGTTGTTTGTATCATCTTCATGTTGGGG < 41bp 0.865699759373955 0.484209510545274 0.59404606 0.33050877 prediction 0.73139951874791 Functional Loss - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12203043 chr10:12203044 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3237 0 0 1 0 1 Ribosome 0.438444249270798 0.438845028949185 0.18809212 0 hPsi_site_8654 iPseU_CNN:0.18809212;iRNA_PseU:0 8655 chr5 10403611 10403611 1 + A G rs149231553 10403610 + 10403590 10403630 41 GCATTGGCTAGTGGGAATGGTATATGTCTTCTACTTTGCCT GCATTGGCTAGTGGGAATGGTGTATGTCTTCTACTTTGCCT < 41bp 0.865668766539772 0.497724672686111 0.7088493 0.47447675 prediction 0.731337533079544 Functional Loss - MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10403610 chr5:10403611 synonymous SNV . 0 22 hPsi_associated_SNPs_3238 0 0 1 0 2 Nucleus 0.438718574914022 0.438718363763455 0.4176986 0 hPsi_site_8655 iPseU_CNN:0.4176986;iRNA_PseU:0 8656 chr19 7622153 7622153 1 + A G ACC 7622152 + 7622132 7622172 41 ACCTACTCATGGATGGCGGCTACATCAACAATCTGCCAGGC ACCTACTCATGGATGGCGGCTGCATCAACAATCTGCCAGGC < 41bp 0.865658020916994 0.489706755271586 0.4614758 0.29603952 prediction 0.731316041833987 Functional Loss - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7622152 chr19:7622153 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3239 0 0 1 0 1 Ribosome 0.417942437110087 0.438664649915191 0 0 hPsi_site_8656 iPseU_CNN:0;iRNA_PseU:0 8657 chr11 10791812 10791812 1 + A G LUAD 10791811 + 10791791 10791831 41 AAAACACTGAAGTTGTACTCTATTTGGCCCGGGCCCTCTTC AAAACACTGAAGTTGTACTCTGTTTGGCCCGGGCCCTCTTC < 41bp 0.872435677894596 0.506779563948194 0.7150854 0.56984514 prediction 0.731312227892803 Functional Loss - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10791811 chr11:10791812 nonsynonymous SNV 0.918 2 22 hPsi_associated_SNPs_3240 0 0 1 0 2 Cytosol 0.438718584949219 0.438718545665623 0.29048052 0 hPsi_site_8657 iPseU_CNN:0.29048052;iRNA_PseU:0 8658 chr11 121038875 121038875 1 + A G LUSC 121038874 + 121038854 121038894 41 ATGTGGAATTTTCATGTGCTTATGAGCTGGATATCAAGATC ATGTGGAATTTTCATGTGCTTGTGAGCTGGATATCAAGATC < 41bp 0.866654837158414 0.50100207015607 0.475332 0.36343318 prediction 0.731305534004689 Functional Loss - TECTA ENSG00000109927 CDS Human protein_coding chr11:121038874 chr11:121038875 nonsynonymous SNV 0.989 5 22 hPsi_associated_SNPs_3241 0 0 1 0 1 exosome 0.438716609301872 0.438862759554959 0 0 hPsi_site_8658 iPseU_CNN:0;iRNA_PseU:0 8659 chr7 139090426 139090426 1 + A G SKCM 139090425 + 139090405 139090445 41 GAGTTAAATGAAGAAATTGGTAAATTGTTAGCCAAGGTGGA GAGTTAAATGAAGAAATTGGTGAATTGTTAGCCAAGGTGGA < 41bp 0.865554710386261 0.489371006608242 0.3535785 0.28181803 prediction 0.731109420772523 Functional Loss - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139090425 chr7:139090426 nonsynonymous SNV 0.931 1 22 hPsi_associated_SNPs_3242 0 0 1 0 1 unknown 0.438718829012952 0.438718596799416 0 0 hPsi_site_8659 iPseU_CNN:0;iRNA_PseU:0 8660 chr1 166818194 166818194 1 + A G UCEC 166818193 + 166818173 166818213 41 AGAAAATGAAGAATCTGACGTAAAGCCTCCAGACTGGCCAA AGAAAATGAAGAATCTGACGTGAAGCCTCCAGACTGGCCAA < 41bp 0.869336495332007 0.503818566119686 0.35368186 0.223991 prediction 0.731035858424642 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818193 chr1:166818194 synonymous SNV . 0 22 hPsi_associated_SNPs_3243 0 0 1 0 1 Nucleus 0.438718596706945 0.438719846731337 0 0 hPsi_site_8660 iPseU_CNN:0;iRNA_PseU:0 8661 chr9 5534885 5534885 1 + A G UCEC 5534884 + 5534864 5534904 41 TTGCAAAAGGTGGAAAATGATACATCCCCACACCGTGAAAG TTGCAAAAGGTGGAAAATGATGCATCCCCACACCGTGAAAG < 41bp 0.865485154507066 0.488893234425425 0.66836977 0.33936858 prediction 0.730970309014132 Functional Loss - PDCD1LG2 ENSG00000197646 CDS Human protein_coding chr9:5534884 chr9:5534885 nonsynonymous SNV 0.131 0 22 hPsi_associated_SNPs_3244 0 0 0 0 0 exosome 0.438720201076247 0.438718607524308 0.33673954 0 hPsi_site_8661 iPseU_CNN:0.33673954;iRNA_PseU:0 8662 chr12 113531873 113531873 1 + A G UCEC 113531872 + 113531852 113531892 41 CCGAGGATGTGGTTCGAAGATACATGCAGAAGGTGAAAAAC CCGAGGATGTGGTTCGAAGATGCATGCAGAAGGTGAAAAAC < 41bp 0.865475725904431 0.488142834029117 0.42037475 0.18592137 prediction 0.730951451808861 Functional Loss - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113531872 chr12:113531873 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3245 0 0 0 0 2 Endoplasmic reticulum 0.438718581852791 0.438718589952871 0 0 hPsi_site_8662 iPseU_CNN:0;iRNA_PseU:0 8663 chr1 159166695 159166695 1 + T C GBM 159166696 - 159166676 159166716 41 ACACTGCCCTCCTTCTCCCATAGGTACTGCTGGGGGCTGTC ACACTGCCCTCCTTCTCCCATGGGTACTGCTGGGGGCTGTC < 41bp 0.871611659676499 0.506205647745126 0.21820697 0.21307278 prediction 0.730812023862746 Functional Loss - CADM3 ENSG00000162706 CDS Human protein_coding chr1:159166696 chr1:159166695 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3246 0 0 0 0 0 exosome 0.438712642936796 0.438718581646235 0 0 hPsi_site_8663 iPseU_CNN:0;iRNA_PseU:0 8664 chr1 111777575 111777575 1 + A G rs35041930 111777574 + 111777554 111777594 41 ACATCACGCTTGGAATTCATTAACTCCATAATCCTGTTTCT ACATCACGCTTGGAATTCATTGACTCCATAATCCTGTTTCT < 41bp 0.865395024648288 0.496823986981546 0.51969296 0.30145925 prediction 0.730790049296577 Functional Loss - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111777574 chr1:111777575 nonsynonymous SNV 0.056 0 22 hPsi_associated_SNPs_3247 0 0 0 0 1 exosome 0.438672869666855 0.438617195287913 0.03938592 0 hPsi_site_8664 iPseU_CNN:0.03938592;iRNA_PseU:0 8665 chr15 91434273 91434273 1 + A G KIRC 91434272 + 91434252 91434292 41 CCCTGCATGAGCAGCTGTGGTACCACGGGGCCATCCCGAGG CCCTGCATGAGCAGCTGTGGTGCCACGGGGCCATCCCGAGG < 41bp 0.865383145251014 0.481750245337794 0.40305173 0.15436703 prediction 0.730766290502027 Functional Loss - FES ENSG00000182511 CDS Human protein_coding chr15:91434272 chr15:91434273 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3248 0 0 0 0 1 cytosol 0.43873164564927 0.438825350386243 0 0 hPsi_site_8665 iPseU_CNN:0;iRNA_PseU:0 8666 chr5 167933060 167933060 1 + A G rs2305733 167933059 + 167933039 167933079 41 GGATGATGGCAGAAAGATTGTATTTGTCCCAGGGTGTTCCA GGATGATGGCAGAAAGATTGTGTTTGTCCCAGGGTGTTCCA < 41bp 0.871711733353824 0.506332557588473 0.5599394 0.36110517 prediction 0.730758351530702 Functional Loss - RARS ENSG00000113643 CDS Human protein_coding chr5:167933059 chr5:167933060 synonymous SNV . 0 22 hPsi_associated_SNPs_3249 1 0 1 0 1 Nucleus 0.438719064331868 0.438718475771755 0.1198788 0 hPsi_site_8666 iPseU_CNN:0.1198788;iRNA_PseU:0 8667 chr12 22208418 22208418 1 + A G STAD 22208417 + 22208397 22208437 41 ATTGTAGGAAATATTCAAGCTACTTCTCCATGTTTACATCC ATTGTAGGAAATATTCAAGCTGCTTCTCCATGTTTACATCC < 41bp 0.865342972189625 0.498648114573938 0.4224927 0.15351132 prediction 0.730685944379249 Functional Loss - CMAS ENSG00000111726 CDS Human protein_coding chr12:22208417 chr12:22208418 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_3250 0 0 1 11 1 Ribosome 0.436243171450788 0.438619981748263 0 0 hPsi_site_8667 iPseU_CNN:0;iRNA_PseU:0 8668 chr7 129095138 129095138 1 + A G rs150002869 129095137 + 129095117 129095157 41 CTTTTACTCTTCTCCATGGTTACCAAGTTCTGCAGTGGCCT CTTTTACTCTTCTCCATGGTTGCCAAGTTCTGCAGTGGCCT < 41bp 0.867728655336656 0.502391355626125 0.44835052 0.27423605 prediction 0.730674599421062 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129095137 chr7:129095138 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3251 0 0 1 0 2 Nucleus 0.438623640465997 0.43878860663245 0 0 hPsi_site_8668 iPseU_CNN:0;iRNA_PseU:0 8669 chr19 19636994 19636994 1 + A G LUSC 19636993 + 19636973 19637013 41 CAGCGCCTCTCTTCACAGGCTACAGCATGCTGGCCATAGGG CAGCGCCTCTCTTCACAGGCTGCAGCATGCTGGCCATAGGG < 41bp 0.874263607739091 0.508949726860379 0.48549753 0.3087207 prediction 0.730627761757424 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19636993 chr19:19636994 nonsynonymous SNV 0.360 4 22 hPsi_associated_SNPs_3252 0 0 1 0 2 Endoplasmic reticulum 0.438731236565046 0.438720374621221 0 0 hPsi_site_8669 iPseU_CNN:0;iRNA_PseU:0 8670 chrX 68749004 68749004 1 + A G COAD 68749003 + 68748983 68749023 41 GGGCTCCCTGGCTTTATCTGTACAGGTAAAGGCAGGGCACT GGGCTCCCTGGCTTTATCTGTGCAGGTAAAGGCAGGGCACT < 41bp 0.86529020386289 0.486510785523347 0.7518338 0.40092632 prediction 0.730580407725779 Functional Loss - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68749003 chrX:68749004 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3253 0 0 0 0 1 exosome 0.438699419710298 0.438713807675175 0.5036676 0 hPsi_site_8670 iPseU_CNN:0.5036676;iRNA_PseU:0 8671 chr16 88689695 88689695 1 + A G LUAD 88689694 + 88689674 88689714 41 CGCGATCCCGGTCTTCATCCTACAGCTCCTACTCCAGCCGC CGCGATCCCGGTCTTCATCCTGCAGCTCCTACTCCAGCCGC < 41bp 0.865288083331914 0.481486990233189 0.67801356 0.3312476 prediction 0.730576166663827 Functional Loss - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88689694 chr16:88689695 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3254 0 0 1 0 2 chromatin 0.438480680378399 0.438936217971478 0.35602712 0 hPsi_site_8671 iPseU_CNN:0.35602712;iRNA_PseU:0 8672 chr18 3273065 3273065 1 + A G HNSC 3273064 + 3273044 3273084 41 GACAAGGAAGATTTGCATGATATGCTTGCTTCTCTAGGTAG GACAAGGAAGATTTGCATGATGTGCTTGCTTCTCTAGGTAG < 41bp 0.865262128839243 0.499995028756099 0.66537076 0.5231454 prediction 0.730524257678486 Functional Loss - MYL12B ENSG00000118680 CDS Human protein_coding chr18:3273064 chr18:3273065 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3255 0 0 1 0 1 Cytosol 0.438717241777786 0.43865640484856 0.28445072 0 hPsi_site_8672 iPseU_CNN:0.28445072;iRNA_PseU:0 8673 chr3 50148187 50148187 1 + A G COAD 50148186 + 50148166 50148206 41 ATCCGACAACAGGGCTCTATTATGACCCCAACTCGCAAGTA ATCCGACAACAGGGCTCTATTGTGACCCCAACTCGCAAGTA < 41bp 0.86524408256851 0.487543601009561 0.8393957 0.43007115 prediction 0.730488165137021 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50148186 chr3:50148187 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3256 0 0 1 0 2 Cytosol 0.438717395386719 0.438718033011397 0.6787914 0 hPsi_site_8673 iPseU_CNN:0.6787914;iRNA_PseU:0 8674 chrX 49093607 49093607 1 + A G LUSC 49093606 + 49093586 49093626 41 CTTCACCACTGAGCTGGTTGTAGAGGCTGTGGTCCGCTGCC CTTCACCACTGAGCTGGTTGTGGAGGCTGTGGTCCGCTGCC < 41bp 0.865214297706097 0.482147102298911 0.63812226 0.3298303 prediction 0.730428595412193 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093606 chrX:49093607 synonymous SNV . 0 22 hPsi_associated_SNPs_3257 0 0 1 0 1 Cytosol 0.440650406267228 0.438397761695495 0.27624452 0 hPsi_site_8674 iPseU_CNN:0.27624452;iRNA_PseU:0 8675 chr20 1223439 1223439 1 + A G UCEC 1223438 + 1223418 1223458 41 AAGAAGAGGGGAGGAGTGCATACACTTCTGTCAACTGCTGC AAGAAGAGGGGAGGAGTGCATGCACTTCTGTCAACTGCTGC < 41bp 0.872688009019399 0.507487485070202 0.70140785 0.31918567 prediction 0.730401047898395 Functional Loss - RAD21L1 ENSG00000244588 CDS Human protein_coding chr20:1223438 chr20:1223439 nonsynonymous SNV 0.940 1 22 hPsi_associated_SNPs_3258 0 0 0 0 1 chromatin 0.43865583373496 0.438678719087791 0.4028157 0 hPsi_site_8675 iPseU_CNN:0.4028157;iRNA_PseU:0 8676 chr17 53851071 53851071 1 + A G rs2960063 53851070 + 53851050 53851090 41 CTGGCGTTGGTGTCTTGCCTTAACTGGCTATGCAGTATGTC CTGGCGTTGGTGTCTTGCCTTGACTGGCTATGCAGTATGTC < 41bp 0.865125166037193 0.492668917292314 0.3848846 0.20427132 prediction 0.730250332074386 Functional Loss - PCTP ENSG00000141179 CDS Human protein_coding chr17:53851070 chr17:53851071 synonymous SNV . 0 22 hPsi_associated_SNPs_3259 0 0 0 2 1 Ribosome 0.438718592995087 0.438718593003252 0 0 hPsi_site_8676 iPseU_CNN:0;iRNA_PseU:0 8677 chr19 35514178 35514178 1 + A G LUSC 35514177 + 35514157 35514197 41 CCCTCAACGTCCTGCTCTTCTACCGCCTCTGGTCCCTGGAA CCCTCAACGTCCTGCTCTTCTGCCGCCTCTGGTCCCTGGAA < 41bp 0.865115019247511 0.476372715688353 0.4042929 0.25996363 prediction 0.730230038495022 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35514177 chr19:35514178 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_3260 0 0 1 0 2 Endoplasmic reticulum 0.438594426810592 0.438729504656293 0 0 hPsi_site_8677 iPseU_CNN:0;iRNA_PseU:0 8678 chr11 55595089 55595089 1 + A G LGG 55595088 + 55595068 55595108 41 CCATCTGTAACCCCCTGCTGTACATGGTGACCATGTCTCAG CCATCTGTAACCCCCTGCTGTGCATGGTGACCATGTCTCAG < 41bp 0.868823214495101 0.503762844075304 0.6195879 0.288817 prediction 0.730120740839594 Functional Loss - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595088 chr11:55595089 nonsynonymous SNV 0.891 4 22 hPsi_associated_SNPs_3261 0 0 0 0 0 unknown 0.438718591018229 0.438715427709741 0.2391758 0 hPsi_site_8678 iPseU_CNN:0.2391758;iRNA_PseU:0 8679 chr19 40486604 40486604 1 + A G STAD 40486603 + 40486583 40486623 41 GATAAGATTTCAGGAGCTGATATTAACTCCATCTGTCAGGA GATAAGATTTCAGGAGCTGATGTTAACTCCATCTGTCAGGA < 41bp 0.874117065160188 0.509080156022766 0.38441372 0.2020382 prediction 0.730073818274844 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40486603 chr19:40486604 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3262 0 0 1 0 2 Ribosome 0.438641010029559 0.438697983878324 0 0 hPsi_site_8679 iPseU_CNN:0;iRNA_PseU:0 8680 chr16 83999242 83999242 1 + A G UVM 83999241 + 83999221 83999261 41 CCATCCTGTCGCCCAGCCCCTATGAGGGTTACCGCAGCCTC CCATCCTGTCGCCCAGCCCCTGTGAGGGTTACCGCAGCCTC < 41bp 0.865022842768586 0.483556764509971 0.31750244 0.25312012 prediction 0.730045685537172 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83999241 chr16:83999242 nonsynonymous SNV 0.975 3 22 hPsi_associated_SNPs_3263 0 0 0 0 0 chromatin 0.43871913695566 0.438718804289295 0 0 hPsi_site_8680 iPseU_CNN:0;iRNA_PseU:0 8681 chrX 70757897 70757897 1 + A G UCEC 70757896 + 70757876 70757916 41 TGGAAGGGGCAGTACAAGCTTACGTCTCTGCTCTTCAGTAC TGGAAGGGGCAGTACAAGCTTGCGTCTCTGCTCTTCAGTAC < 41bp 0.875366314030863 0.510353614468238 0.72193 0.51191336 prediction 0.730025399125251 Functional Loss - OGT ENSG00000147162 CDS Human protein_coding chrX:70757896 chrX:70757897 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_3264 0 0 1 0 1 Nucleus 0.44137657685535 0.439431628339216 0.42003328 0 hPsi_site_8681 iPseU_CNN:0.42003328;iRNA_PseU:0 8682 chr5 145613243 145613243 1 + A G rs145407605 145613242 + 145613222 145613262 41 GGTCCAGGTCCTGGCCATAGTATGAGACTTCCTGTTCCCCA GGTCCAGGTCCTGGCCATAGTGTGAGACTTCCTGTTCCCCA < 41bp 0.864987344065817 0.484375539974382 0.74978614 0.6353212 prediction 0.729974688131634 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145613242 chr5:145613243 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_3265 0 0 1 0 1 Nucleus 0.438718722380578 0.438718223319785 0.22892988 0 hPsi_site_8682 iPseU_CNN:0.22892988;iRNA_PseU:0 8683 chrX 15549469 15549469 1 + A G KIRC 15549468 + 15549448 15549488 41 CAGGGAAAAGAAGGAGCATTTATGGTTAGAAATTCGAGCCA CAGGGAAAAGAAGGAGCATTTGTGGTTAGAAATTCGAGCCA < 41bp 0.864978888469851 0.497023612504237 0.31546372 0.2392976 prediction 0.729957776939703 Functional Loss - BMX ENSG00000102010 CDS Human protein_coding chrX:15549468 chrX:15549469 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3266 0 0 0 0 2 cytosol 0.438718693476949 0.438718653632628 0 0 hPsi_site_8683 iPseU_CNN:0;iRNA_PseU:0 8684 chr10 105204397 105204397 1 + A G GBM 105204396 + 105204376 105204416 41 GCACAGATGTCTGGTCGGTCTATATCGACATGACCATCAAG GCACAGATGTCTGGTCGGTCTGTATCGACATGACCATCAAG < 41bp 0.864978065043374 0.494696482223776 0.714301 0.43264866 prediction 0.729956130086748 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105204396 chr10:105204397 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3267 0 0 1 0 1 Nucleus 0.441542784716132 0.435749987872878 0.428602 0 hPsi_site_8684 iPseU_CNN:0.428602;iRNA_PseU:0 8685 chr3 44835837 44835837 1 + A G UCEC 44835836 + 44835816 44835856 41 AAGTAATGAGATTGTGAATATACGGACCTCCCTACTCAACC AAGTAATGAGATTGTGAATATGCGGACCTCCCTACTCAACC < 41bp 0.864887076834079 0.491401594872944 0.31890067 0.25754523 prediction 0.729774153668159 Functional Loss - KIF15 ENSG00000163808 CDS Human protein_coding chr3:44835836 chr3:44835837 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3268 0 0 1 0 1 Ribosome 0.438711143221071 0.438714413730834 0 0 hPsi_site_8685 iPseU_CNN:0;iRNA_PseU:0 8686 chr9 131196787 131196787 1 + A G UCEC 131196786 + 131196766 131196806 41 ACTCCTACTGGACGCTGGCCTATGCCCTGCGTCTGGCGGGT ACTCCTACTGGACGCTGGCCTGTGCCCTGCGTCTGGCGGGT < 41bp 0.864882206170582 0.48693844639145 0.62717986 0.3276713 prediction 0.729764412341164 Functional Loss - CERCAM ENSG00000167123 CDS Human protein_coding chr9:131196786 chr9:131196787 nonsynonymous SNV 0.077 5 22 hPsi_associated_SNPs_3269 0 0 1 0 1 chromatin 0.438089024699446 0.432146050928205 0.25435972 0 hPsi_site_8686 iPseU_CNN:0.25435972;iRNA_PseU:0 8687 chr16 71668213 71668213 1 + A G ESCA 71668212 + 71668192 71668232 41 GCTTGGGGGGCATTTACTACTATCAGTTCGGAGGGGCTTAC GCTTGGGGGGCATTTACTACTGTCAGTTCGGAGGGGCTTAC < 41bp 0.869082101916206 0.504211515711703 0.7690991 0.53379023 prediction 0.729741172409006 Functional Loss - MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71668212 chr16:71668213 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_3270 0 0 0 0 0 Ribosome 0.438718592987394 0.438718593026116 0.47061774 0 hPsi_site_8687 iPseU_CNN:0.47061774;iRNA_PseU:0 8688 chr4 39469222 39469222 1 + A G UCEC 39469221 + 39469201 39469241 41 AAAAGTTGCTCTGTCAGGATTAGATGTGTATGCACATAATG AAAAGTTGCTCTGTCAGGATTGGATGTGTATGCACATAATG < 41bp 0.864869451677375 0.498457205182407 0.3228463 0.31452423 prediction 0.72973890335475 Functional Loss - LIAS ENSG00000121897 CDS Human protein_coding chr4:39469221 chr4:39469222 synonymous SNV . 0 22 hPsi_associated_SNPs_3271 0 0 1 0 2 Ribosome 0.438744028415594 0.4387185726243 0 0 hPsi_site_8688 iPseU_CNN:0;iRNA_PseU:0 8689 chr4 134073831 134073831 1 + A G HNSC 134073830 + 134073810 134073850 41 CCCTGCAGCCCTTCGCGGAGTACGGACACTGAGCACAACCC CCCTGCAGCCCTTCGCGGAGTGCGGACACTGAGCACAACCC < 41bp 0.870626705498329 0.505760116220823 0.7355334 0.28891063 prediction 0.729733178555013 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073830 chr4:134073831 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_3272 0 0 1 0 1 cytosol 0.438718592662082 0.43871859248829 0.4710668 0 hPsi_site_8689 iPseU_CNN:0.4710668;iRNA_PseU:0 8690 chr17 78082309 78082309 1 + A G BLCA 78082308 + 78082288 78082328 41 GATACCCGTTCATGCCGCCATACTGGGGCCTGGGCTTCCAC GATACCCGTTCATGCCGCCATGCTGGGGCCTGGGCTTCCAC < 41bp 0.864841244667212 0.489190424053655 0.3517502 0.27732432 prediction 0.729682489334423 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78082308 chr17:78082309 nonsynonymous SNV 0.959 5 22 hPsi_associated_SNPs_3273 0 0 1 0 2 Endoplasmic reticulum 0.438718606239741 0.43871860545402 0 0 hPsi_site_8690 iPseU_CNN:0;iRNA_PseU:0 8691 chr8 17447030 17447030 1 + A G HNSC 17447029 + 17447009 17447049 41 CCAAAAGAACCAGGAGAGAATAGAATCAAACCTACCAACAA CCAAAAGAACCAGGAGAGAATGGAATCAAACCTACCAACAA < 41bp 0.864757925789626 0.489605496182935 0.41567552 0.3355559 prediction 0.729515851579253 Functional Loss - PDGFRL ENSG00000104213 CDS Human protein_coding chr8:17447029 chr8:17447030 nonsynonymous SNV 0.977 2 22 hPsi_associated_SNPs_3274 0 0 0 0 1 exosome 0.438718580485667 0.438718592995164 0 0 hPsi_site_8691 iPseU_CNN:0;iRNA_PseU:0 8692 chr19 54394954 54394954 1 + A G HNSC 54394953 + 54394933 54394973 41 GAGGCCCGTAACCTAATTCCTATGGACCCCAATGGTCTCTC GAGGCCCGTAACCTAATTCCTGTGGACCCCAATGGTCTCTC < 41bp 0.864749497575251 0.492790019000119 0.35276732 0.2825142 prediction 0.729498995150502 Functional Loss - PRKCG ENSG00000126583 CDS Human protein_coding chr19:54394953 chr19:54394954 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_3275 0 0 0 0 1 Cytosol 0.438791880153644 0.438730396682263 0 0 hPsi_site_8692 iPseU_CNN:0;iRNA_PseU:0 8693 chr16 15100389 15100389 1 + A G LUSC 15100388 + 15100368 15100408 41 ATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTA ATATAACAAGAAGCCTGTCATGTATCTTAGTGCTGCTGCTA < 41bp 0.872719986512969 0.508026013588991 0.35405535 0.22112486 prediction 0.729387945847957 Functional Loss - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15100388 chr16:15100389 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_3276 0 0 1 0 1 Cytosol 0.438380402308274 0.438212423808337 0 0 hPsi_site_8693 iPseU_CNN:0;iRNA_PseU:0 8694 chr1 224318241 224318241 1 + A G STAD 224318240 + 224318220 224318260 41 GATTTCTGAAAGTGGAGAGGTACCATAATCTATGTCAGAAA GATTTCTGAAAGTGGAGAGGTGCCATAATCTATGTCAGAAA < 41bp 0.864608319493444 0.494364055640698 0.8511878 0.3889535 prediction 0.729216638986887 Functional Loss - FBXO28 ENSG00000143756 CDS Human protein_coding chr1:224318240 chr1:224318241 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_3277 0 0 1 0 2 Cytosol 0.441846266946076 0.439168326871774 0.7023756 0 hPsi_site_8694 iPseU_CNN:0.7023756;iRNA_PseU:0 8695 chr1 215793877 215793877 1 + A G LIHC 215793876 + 215793856 215793896 41 GGAGGAACTGACTCACCTGGTACTGCGTCCCCATCTCCTAC GGAGGAACTGACTCACCTGGTGCTGCGTCCCCATCTCCTAC < 41bp 0.864596763516088 0.490954472667305 0.54586494 0.24482724 prediction 0.729193527032176 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215793876 chr1:215793877 nonsynonymous SNV 0.510 1 22 hPsi_associated_SNPs_3278 0 0 1 0 0 Ribosome 0.439094132725224 0.441426979932998 0.0917298799999999 0 hPsi_site_8695 iPseU_CNN:0.0917298799999999;iRNA_PseU:0 8696 chr3 184298629 184298629 1 + A G COAD 184298628 + 184298608 184298648 41 TCATGTGGGAGGTCATGAGCTATGGAGAGCGACCCTACTGG TCATGTGGGAGGTCATGAGCTGTGGAGAGCGACCCTACTGG < 41bp 0.864589637578198 0.484421690776879 0.3260399 0.34074765 prediction 0.729179275156396 Functional Loss - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184298628 chr3:184298629 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3279 0 0 0 0 1 Endoplasmic reticulum 0.438716872364891 0.43871859568341 0 0 hPsi_site_8696 iPseU_CNN:0;iRNA_PseU:0 8697 chr5 68715940 68715940 1 + A G rs115738510 68715939 + 68715919 68715959 41 TTGGTGGATTGGGCAGTATGTATGGGGGCTATTACTACACT TTGGTGGATTGGGCAGTATGTGTGGGGGCTATTACTACACT < 41bp 0.878970167366673 0.514389663296713 0.74571645 0.46629465 prediction 0.729161008139919 Functional Loss - MARVELD2 ENSG00000152939 CDS Human protein_coding chr5:68715939 chr5:68715940 nonsynonymous SNV 0.196 1 22 hPsi_associated_SNPs_3280 1 0 1 0 0 Nucleus 0.438718593664278 0.43871860524337 0.4914329 0 hPsi_site_8697 iPseU_CNN:0.4914329;iRNA_PseU:0 8698 chr16 83949061 83949061 1 + A G rs577833548 83949060 + 83949040 83949080 41 CTCTGAGCAGGTCCTCAGCCTAGTGGCCCAGTTTCAAAAGA CTCTGAGCAGGTCCTCAGCCTGGTGGCCCAGTTTCAAAAGA < 41bp 0.867222058741982 0.502747652101565 0.57456684 0.28937268 prediction 0.728948813280834 Functional Loss - MLYCD ENSG00000103150 CDS Human protein_coding chr16:83949060 chr16:83949061 synonymous SNV . 0 22 hPsi_associated_SNPs_3281 0 0 0 0 0 nucleolus 0.438718592379218 0.438718592995102 0.14913368 0 hPsi_site_8698 iPseU_CNN:0.14913368;iRNA_PseU:0 8699 chr14 77934519 77934519 1 + A G UCEC 77934518 + 77934498 77934538 41 GGCAACGTCTCTGGGGAATTTACTGATCTGGTGAGTACCTG GGCAACGTCTCTGGGGAATTTGCTGATCTGGTGAGTACCTG < 41bp 0.877642951802451 0.513172399626559 0.3342653 0.19572115 prediction 0.728941104351783 Functional Loss - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77934518 chr14:77934519 nonsynonymous SNV 0.974 0 22 hPsi_associated_SNPs_3282 0 0 1 0 2 Ribosome 0.438718592976279 0.438718592995102 0 0 hPsi_site_8699 iPseU_CNN:0;iRNA_PseU:0 8700 chr6 88768481 88768481 1 + A G UCEC 88768480 + 88768460 88768500 41 GAAAGTGTTAGATTGGCATGTATTCACACATCTCCCTTAAA GAAAGTGTTAGATTGGCATGTGTTCACACATCTCCCTTAAA < 41bp 0.867251576674514 0.502798517990855 0.62363553 0.3218188 prediction 0.728906117367318 Functional Loss - SPACA1 ENSG00000118434 CDS Human protein_coding chr6:88768480 chr6:88768481 nonsynonymous SNV 0.633 0 22 hPsi_associated_SNPs_3283 0 0 0 0 2 unknown 0.43773125631377 0.430592849770975 0.24727106 0 hPsi_site_8700 iPseU_CNN:0.24727106;iRNA_PseU:0 8701 chr17 4836772 4836772 1 + A G UCEC 4836771 + 4836751 4836791 41 TGATGAAGGTGACACAGACCTATATGATTACTACCCAGAAG TGATGAAGGTGACACAGACCTGTATGATTACTACCCAGAAG < 41bp 0.864440919104335 0.495506409654762 0.7279751 0.63487476 prediction 0.728881838208671 Functional Loss - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836771 chr17:4836772 synonymous SNV . 0 22 hPsi_associated_SNPs_3284 0 0 0 0 0 exosome 0.438718723680827 0.438718746315158 0.18620068 0 hPsi_site_8701 iPseU_CNN:0.18620068;iRNA_PseU:0 8702 chr19 41929007 41929007 1 + A G COAD 41929006 + 41928986 41929026 41 CCATCTCCCGGCTGCGGCACTATCTGCTGAGCCAAGGCTGG CCATCTCCCGGCTGCGGCACTGTCTGCTGAGCCAAGGCTGG < 41bp 0.881894792054632 0.517546251360856 0.2847733 0.22380161 prediction 0.728697081387553 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41929006 chr19:41929007 nonsynonymous SNV 0.275 5 22 hPsi_associated_SNPs_3285 0 0 1 0 1 Cytosol 0.438718205687759 0.438718353857898 0 0 hPsi_site_8702 iPseU_CNN:0;iRNA_PseU:0 8703 chr21 42821209 42821209 1 + A G UCEC 42821208 + 42821188 42821228 41 AGAGCCGGCTGTGGATATGCTACACACCGTGACGGGTGAGT AGAGCCGGCTGTGGATATGCTGCACACCGTGACGGGTGAGT < 41bp 0.864299865735933 0.479846273836562 0.7721144 0.4943125 prediction 0.728599731471866 Functional Loss - MX1 ENSG00000157601 CDS Human protein_coding chr21:42821208 chr21:42821209 synonymous SNV . 0 22 hPsi_associated_SNPs_3286 0 0 0 0 1 exosome 0.438757490165602 0.438720015262569 0.5442288 0 hPsi_site_8703 iPseU_CNN:0.5442288;iRNA_PseU:0 8704 chr1 2938660 2938660 1 + A G LUAD 2938659 + 2938639 2938679 41 ACTTCGGCGTGCCCGCTTTCTACCTGTCGGACCAGGCGGTG ACTTCGGCGTGCCCGCTTTCTGCCTGTCGGACCAGGCGGTG < 41bp 0.865545295179774 0.501310192980636 0.6015776 0.23426837 prediction 0.728470204398275 Functional Loss - ACTRT2 ENSG00000169717 CDS Human protein_coding chr1:2938659 chr1:2938660 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_3287 0 0 0 0 0 unknown 0.436971058203493 0.438705807687149 0.2031552 0 hPsi_site_8704 iPseU_CNN:0.2031552;iRNA_PseU:0 8705 chr9 127110067 127110067 1 + A G OV 127110066 + 127110046 127110086 41 AGAAGATCGAGCAGTGTGACTACCCCCCACTCCCCGGGGAG AGAAGATCGAGCAGTGTGACTGCCCCCCACTCCCCGGGGAG < 41bp 0.864198933559299 0.480526098063958 0.8789524 0.16377956 prediction 0.728397867118597 Functional Loss - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127110066 chr9:127110067 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_3288 0 0 1 0 2 Cytosol 0.438718593095897 0.438718593025682 0.7579048 0 hPsi_site_8705 iPseU_CNN:0.7579048;iRNA_PseU:0 8706 chr1 28605669 28605669 1 + A G BLCA 28605668 + 28605648 28605688 41 GAGCGGAACCTCAAGGTCTATATCAAGACAGTGGCCTGCTA GAGCGGAACCTCAAGGTCTATGTCAAGACAGTGGCCTGCTA < 41bp 0.87003199208543 0.505838232731324 0.5030422 0.40334836 prediction 0.728387518708213 Functional Loss - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28605668 chr1:28605669 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3289 0 0 1 0 2 Ribosome 0.438718593136889 0.438718591972205 0.00608439999999999 0 hPsi_site_8706 iPseU_CNN:0.00608439999999999;iRNA_PseU:0 8707 chr20 30689285 30689285 1 + A G LUSC 30689284 + 30689264 30689304 41 AGAGTGTGCTGGATGACTTCTACACGGCCACAGAGAGCCAG AGAGTGTGCTGGATGACTTCTGCACGGCCACAGAGAGCCAG < 41bp 0.864191571601299 0.48579361641581 0.3881741 0.26157546 prediction 0.728383143202597 Functional Loss - HCK ENSG00000101336 CDS Human protein_coding chr20:30689284 chr20:30689285 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3290 0 0 0 0 0 Nucleus 0.438718499107369 0.438718594582171 0 0 hPsi_site_8707 iPseU_CNN:0;iRNA_PseU:0 8708 chr16 2025572 2025572 1 + A G UCEC 2025571 + 2025551 2025591 41 CAGCTTCTGGGCAGTGTGTGTACACGCAGGCCCAGCCGCCG CAGCTTCTGGGCAGTGTGTGTGCACGCAGGCCCAGCCGCCG < 41bp 0.871075387424653 0.506925201187028 0.7728379 0.30269983 prediction 0.728300372475249 Functional Loss - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2025571 chr16:2025572 nonsynonymous SNV 0.808 2 22 hPsi_associated_SNPs_3291 0 0 1 0 1 Nucleus 0.438658315362267 0.438412602264061 0.5456758 0 hPsi_site_8708 iPseU_CNN:0.5456758;iRNA_PseU:0 8709 chr3 5025142 5025142 1 + A G COAD 5025141 + 5025121 5025161 41 TCCCACCTTCAGCGACTGCCTACCTGCCCATGCTGGAGAAG TCCCACCTTCAGCGACTGCCTGCCTGCCCATGCTGGAGAAG < 41bp 0.864126128326067 0.481346763563104 0.73647034 0.29898366 prediction 0.728252256652133 Functional Loss - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025141 chr3:5025142 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_3292 0 0 1 0 0 chromatin 0.438682255428361 0.438717673508889 0.47294068 0 hPsi_site_8709 iPseU_CNN:0.47294068;iRNA_PseU:0 8710 chr17 43322238 43322238 1 + A G COAD 43322237 + 43322217 43322257 41 GTAGCAAGCGTGGGGCAGCCTATGGCTTCCGGCTCCAGAGC GTAGCAAGCGTGGGGCAGCCTGTGGCTTCCGGCTCCAGAGC < 41bp 0.88293176880111 0.518812426463409 0.36927915 0.34763455 prediction 0.728238684675402 Functional Loss - FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43322237 chr17:43322238 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3293 0 0 1 0 2 chromatin 0.438705757168771 0.438698950763591 0 0 hPsi_site_8710 iPseU_CNN:0;iRNA_PseU:0 8711 chr14 77935573 77935573 1 + A G CESC 77935572 + 77935552 77935592 41 GCATTAAACAGACCTTTGGCTATGGCGCACGCTTATTTTAG GCATTAAACAGACCTTTGGCTGTGGCGCACGCTTATTTTAG < 41bp 0.875069276460878 0.5109536066259 0.3638227 0.26925367 prediction 0.728231339669955 Functional Loss - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77935572 chr14:77935573 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3294 0 0 1 0 0 Ribosome 0.438718673387149 0.438912079442436 0 0 hPsi_site_8711 iPseU_CNN:0;iRNA_PseU:0 8712 chr5 140531520 140531520 1 + A G STAD 140531519 + 140531499 140531539 41 ACAACTCGCCCTTCGTGTTGTACCCGCTGCAGAACGGCTCC ACAACTCGCCCTTCGTGTTGTGCCCGCTGCAGAACGGCTCC < 41bp 0.868900137560733 0.504817931189792 0.5170173 0.16091743 prediction 0.728164412741883 Functional Loss - PCDHB6 ENSG00000113211 CDS Human protein_coding chr5:140531519 chr5:140531520 nonsynonymous SNV 0.926 3 22 hPsi_associated_SNPs_3295 0 0 0 0 0 exosome 0.438712733139909 0.4383805691793 0.0340346 0 hPsi_site_8712 iPseU_CNN:0.0340346;iRNA_PseU:0 8713 chr19 36037859 36037859 1 + A G HNSC 36037858 + 36037838 36037878 41 CTTCCTCAGCTGCATTCCCCTATGGGTCGGAGCCCGGGGCA CTTCCTCAGCTGCATTCCCCTGTGGGTCGGAGCCCGGGGCA < 41bp 0.878576298151619 0.514533778642739 0.28099442 0.23020887 prediction 0.72808503901776 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36037858 chr19:36037859 synonymous SNV . 0 22 hPsi_associated_SNPs_3296 0 0 1 0 2 Endoplasmic reticulum 0.439592954875259 0.441684386566326 0 0 hPsi_site_8713 iPseU_CNN:0;iRNA_PseU:0 8714 chr1 215752435 215752435 1 + A G UCEC 215752434 + 215752414 215752454 41 GGTGAAGCCCGGGGAAATGGTACACAGCCTGTTCTCTCTGG GGTGAAGCCCGGGGAAATGGTGCACAGCCTGTTCTCTCTGG < 41bp 0.873538709898919 0.509517874924262 0.75037867 0.4542797 prediction 0.728041669949312 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215752434 chr1:215752435 nonsynonymous SNV 0.532 0 22 hPsi_associated_SNPs_3297 0 0 1 0 1 Ribosome 0.438718593385487 0.438718958604228 0.50075734 0 hPsi_site_8714 iPseU_CNN:0.50075734;iRNA_PseU:0 8715 chr12 53647296 53647296 1 + A G STAD 53647295 + 53647275 53647315 41 TTCGAAACTGGGGGGAGAACTATGACCGGCAGCGTGCCTTC TTCGAAACTGGGGGGAGAACTGTGACCGGCAGCGTGCCTTC < 41bp 0.87293361106645 0.508914244076549 0.4824466 0.34041438 prediction 0.728038733979802 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647295 chr12:53647296 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3298 0 0 1 0 0 Endoplasmic reticulum 0.438718349078914 0.438710371495726 0 0 hPsi_site_8715 iPseU_CNN:0;iRNA_PseU:0 8716 chr9 131885404 131885404 1 + A G PRAD 131885403 + 131885383 131885423 41 GGAAGAAGCTGACCTTCGAGTACAGAGTCTCCGAGGTAGGC GGAAGAAGCTGACCTTCGAGTGCAGAGTCTCCGAGGTAGGC < 41bp 0.867174097476141 0.503240451499504 0.58827287 0.28604087 prediction 0.727867291953273 Functional Loss - PTPA ENSG00000119383 CDS Human protein_coding chr9:131885403 chr9:131885404 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_3299 0 0 1 0 2 Nucleus 0.438718555619191 0.438718501356566 0.17654574 0 hPsi_site_8716 iPseU_CNN:0.17654574;iRNA_PseU:0 8717 chr11 124955536 124955536 1 + A G UCEC 124955535 + 124955515 124955555 41 CGGGCTGGAACAATGTCTTCTACATGCTCATCTCTGCCGAC CGGGCTGGAACAATGTCTTCTGCATGCTCATCTCTGCCGAC < 41bp 0.863909132139829 0.469615677069767 0.3858083 0.26224422 prediction 0.727818264279658 Functional Loss - SLC37A2 ENSG00000134955 CDS Human protein_coding chr11:124955535 chr11:124955536 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3300 0 0 0 0 2 nucleolus 0.4386476398453 0.438273996630103 0 0 hPsi_site_8717 iPseU_CNN:0;iRNA_PseU:0 8718 chr5 140590167 140590167 1 + A G COAD 140590166 + 140590146 140590186 41 ACAACTCGCCCTTCGTGCTGTACCCGCTGCAGAACGGCTCC ACAACTCGCCCTTCGTGCTGTGCCCGCTGCAGAACGGCTCC < 41bp 0.863890135868367 0.495117827286143 0.58187616 0.1691517 prediction 0.727780271736733 Functional Loss - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140590166 chr5:140590167 nonsynonymous SNV 0.011 3 22 hPsi_associated_SNPs_3301 0 0 0 0 0 exosome 0.438719189391492 0.43871864075729 0.16375232 0 hPsi_site_8718 iPseU_CNN:0.16375232;iRNA_PseU:0 8719 chr20 18165423 18165423 1 + A G LIHC 18165422 + 18165402 18165442 41 GGATTGCAACTTTCATGATCTATCATCTGATTCAGGTAAGT GGATTGCAACTTTCATGATCTGTCATCTGATTCAGGTAAGT < 41bp 0.866284466097863 0.502432445293495 0.37842724 0.31171072 prediction 0.727704041608737 Functional Loss - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18165422 chr20:18165423 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3302 0 0 0 0 1 Nucleus 0.420778528625222 0.437001910417253 0 0 hPsi_site_8719 iPseU_CNN:0;iRNA_PseU:0 8720 chr11 64893284 64893284 1 + A G UCEC 64893283 + 64893263 64893303 41 CAATGAGGTGACAGGTACCCTACGGATCAAGGGCTACTTTG CAATGAGGTGACAGGTACCCTGCGGATCAAGGGCTACTTTG < 41bp 0.868257000439494 0.504409343465318 0.61650944 0.3400247 prediction 0.727695313948353 Functional Loss - MRPL49 ENSG00000149792 CDS Human protein_coding chr11:64893283 chr11:64893284 synonymous SNV . 0 22 hPsi_associated_SNPs_3303 0 0 1 0 1 Ribosome 0.438712961117192 0.438718610610365 0.23301888 0 hPsi_site_8720 iPseU_CNN:0.23301888;iRNA_PseU:0 8721 chr10 121541227 121541227 1 + A G COAD 121541226 + 121541206 121541246 41 GACCATGAGGTCTGTAAAGTTACCAAAATTGCTGTGCTCTC GACCATGAGGTCTGTAAAGTTGCCAAAATTGCTGTGCTCTC < 41bp 0.863813638927558 0.480409870456735 0.74417806 0.53418964 prediction 0.727627277855115 Functional Loss - INPP5F ENSG00000198825 CDS Human protein_coding chr10:121541226 chr10:121541227 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_3304 0 0 0 0 2 Cytosol 0.438716693311652 0.43872359162516 0.41997684 0 hPsi_site_8721 iPseU_CNN:0.41997684;iRNA_PseU:0 8722 chr10 54074415 54074415 1 + A G UCEC 54074414 + 54074394 54074434 41 TGTACCCGGGCGGGAATAAGTACCAGACCATTGACAACTAC TGTACCCGGGCGGGAATAAGTGCCAGACCATTGACAACTAC < 41bp 0.8637937585856 0.49792352105489 0.71401006 0.42251498 prediction 0.727587517171199 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074414 chr10:54074415 nonsynonymous SNV 0.779 1 22 hPsi_associated_SNPs_3305 0 0 1 0 1 exosome 0.438718592995102 0.438718592995102 0.42802012 0 hPsi_site_8722 iPseU_CNN:0.42802012;iRNA_PseU:0 8723 chr17 47299926 47299926 1 + A G UCEC 47299925 + 47299905 47299945 41 GCCCTGCAGTGGTGACACTGTACCCATACACCAGCCAGAAG GCCCTGCAGTGGTGACACTGTGCCCATACACCAGCCAGAAG < 41bp 0.875863221639305 0.512126313552953 0.62603706 0.19574597 prediction 0.727473816172703 Functional Loss - ABI3 ENSG00000108798 CDS Human protein_coding chr17:47299925 chr17:47299926 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3306 0 0 0 0 1 exosome 0.439331237538793 0.438857076511149 0.25207412 0 hPsi_site_8723 iPseU_CNN:0.25207412;iRNA_PseU:0 8724 chr8 66989012 66989012 1 + A G rs144599635 66989011 + 66988991 66989031 41 CGACATTTCAAAGAGAAGCATATACGACAAGTACGGATCGC CGACATTTCAAAGAGAAGCATGTACGACAAGTACGGATCGC < 41bp 0.863713482827688 0.493667385442651 0.683361 0.39815003 prediction 0.727426965655376 Functional Loss - DNAJC5B ENSG00000147570 CDS Human protein_coding chr8:66989011 chr8:66989012 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3307 0 0 0 1 1 exosome 0.439582805981305 0.438909202829701 0.366722 0 hPsi_site_8724 iPseU_CNN:0.366722;iRNA_PseU:0 4p partial monosomy syndrome 4p partial monosomy syndrome 8725 chr3 46414769 46414769 1 + A G LUAD 46414768 + 46414748 46414788 41 ATCATCCTCCTGACAATCGATAGGTACCTGGCTGTCGTCCA ATCATCCTCCTGACAATCGATGGGTACCTGGCTGTCGTCCA < 41bp 0.8749903117938 0.511293528593792 0.42781258 0.21109122 prediction 0.727393566400016 Functional Loss - CCR5 ENSG00000160791 CDS Human protein_coding chr3:46414768 chr3:46414769 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3308 0 0 0 0 0 exosome 0.43867834241546 0.438514823776723 0 0 hPsi_site_8725 iPseU_CNN:0;iRNA_PseU:0 8726 chr3 152553754 152553754 1 + A G HNSC 152553753 + 152553733 152553773 41 GCCGGCTGTCTACATCTTGGTATTCATCATCGGCTTCCTGG GCCGGCTGTCTACATCTTGGTGTTCATCATCGGCTTCCTGG < 41bp 0.874596850218921 0.510911554860162 0.8387179 0.3314231 prediction 0.727370590717519 Functional Loss - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553753 chr3:152553754 synonymous SNV . 0 22 hPsi_associated_SNPs_3309 0 0 1 0 0 Endoplasmic reticulum 0.438712453017851 0.438718272509797 0.6774358 0 hPsi_site_8726 iPseU_CNN:0.6774358;iRNA_PseU:0 8727 chr12 108169036 108169036 1 + A G UCEC 108169035 + 108169015 108169055 41 CGGAACGGCTGGCCTTGCCATACTCGCTGCGCACCGCGCCC CGGAACGGCTGGCCTTGCCATGCTCGCTGCGCACCGCGCCC < 41bp 0.863652612428226 0.498840693156915 0.8459383 0.45029652 prediction 0.727305224856453 Functional Loss - ASCL4 ENSG00000187855 CDS Human protein_coding chr12:108169035 chr12:108169036 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_3310 0 0 0 0 0 exosome 0.438710841372895 0.438719492728294 0.6918766 0 hPsi_site_8727 iPseU_CNN:0.6918766;iRNA_PseU:0 8728 chr7 94184852 94184852 1 + A G HNSC 94184851 + 94184831 94184871 41 CTGGCAGCGGACACAAGGGGTATCTTGGTACTGATACCTGG CTGGCAGCGGACACAAGGGGTGTCTTGGTACTGATACCTGG < 41bp 0.863641349345032 0.495018831534378 0.80920285 0.296915 prediction 0.727282698690064 Functional Loss - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94184851 chr7:94184852 nonsynonymous SNV 0.659 0 22 hPsi_associated_SNPs_3311 0 0 1 0 1 Cytosol 0.438662872569816 0.438791981560154 0.6184057 0 hPsi_site_8728 iPseU_CNN:0.6184057;iRNA_PseU:0 8729 chr4 134073431 134073431 1 + A G LUAD 134073430 + 134073410 134073450 41 TGGCGGCGGGGAAACCTCGCTAGACCTCACCCTCATCCTCA TGGCGGCGGGGAAACCTCGCTGGACCTCACCCTCATCCTCA < 41bp 0.863618150793653 0.484876185355319 0.79930294 0.4603669 prediction 0.727236301587307 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073430 chr4:134073431 synonymous SNV . 0 22 hPsi_associated_SNPs_3312 0 0 0 0 0 cytosol 0.438716343522871 0.438718592677415 0.59860588 0 hPsi_site_8729 iPseU_CNN:0.59860588;iRNA_PseU:0 8730 chr10 82122318 82122318 1 + A G LIHC 82122317 + 82122297 82122337 41 TGGCTCACTGGCTTTATCATTACAGGAAAACAGCAAAAGCA TGGCTCACTGGCTTTATCATTGCAGGAAAACAGCAAAAGCA < 41bp 0.8635930216806 0.477437092521056 0.6316725 0.37786144 prediction 0.727186043361201 Functional Loss - DYDC2 ENSG00000133665 CDS Human protein_coding chr10:82122317 chr10:82122318 nonsynonymous SNV 0.162 1 22 hPsi_associated_SNPs_3313 0 0 0 1 1 unknown 0.437925344697524 0.437315004306455 0.263345 0 hPsi_site_8730 iPseU_CNN:0.263345;iRNA_PseU:0 8731 chr7 143013357 143013357 1 + A G STAD 143013356 + 143013336 143013376 41 GGTGAACAAAGCTGGTGGGGTAGTGACCCCCAGTACCAGTA GGTGAACAAAGCTGGTGGGGTGGTGACCCCCAGTACCAGTA < 41bp 0.86355203289775 0.490213683340195 0.4012976 0.21527836 prediction 0.727104065795499 Functional Loss - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143013356 chr7:143013357 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_3314 0 0 0 0 0 exosome 0.438718592994952 0.43871856911381 0 0 hPsi_site_8731 iPseU_CNN:0;iRNA_PseU:0 8732 chr1 158064849 158064849 1 + A G PAAD 158064848 + 158064828 158064868 41 CCACAGCCACTCGATTCTCCTACACCTCCCAGCACTCGGAC CCACAGCCACTCGATTCTCCTGCACCTCCCAGCACTCGGAC < 41bp 0.863550613077084 0.485626117156345 0.2938823 0.18241802 prediction 0.727101226154168 Functional Loss - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158064848 chr1:158064849 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3315 0 0 1 0 0 cytosol 0.438265350852741 0.438399258426389 0 0 hPsi_site_8732 iPseU_CNN:0;iRNA_PseU:0 8733 chr11 72945371 72945371 1 + A G UCEC 72945370 + 72945350 72945390 41 GTCTGAACGCCGTGGCGCTCTACATCTTCTTGTGCCGCCTC GTCTGAACGCCGTGGCGCTCTGCATCTTCTTGTGCCGCCTC < 41bp 0.87657793963796 0.513041758753088 0.56358206 0.30872473 prediction 0.727072361769745 Functional Loss - P2RY2 ENSG00000175591 CDS Human protein_coding chr11:72945370 chr11:72945371 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3316 0 0 0 0 0 exosome 0.438467203123401 0.439348082681076 0.12716412 0 hPsi_site_8733 iPseU_CNN:0.12716412;iRNA_PseU:0 8734 chr16 31049311 31049311 1 + A G UCEC 31049310 + 31049290 31049330 41 GCAATTCAATGCAGTCCGAATACCGGGAGAAGAACGTGGAG GCAATTCAATGCAGTCCGAATGCCGGGAGAAGAACGTGGAG < 41bp 0.871804351675056 0.508272439622175 0.7447113 0.16109163 prediction 0.727063824105762 Functional Loss - STX4 ENSG00000103496 CDS Human protein_coding chr16:31049310 chr16:31049311 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3317 0 0 1 0 2 Ribosome 0.438733476521933 0.438719257973257 0.4894226 0 hPsi_site_8734 iPseU_CNN:0.4894226;iRNA_PseU:0 8735 chr17 71233036 71233036 1 + A G PAAD 71233035 + 71233015 71233055 41 TTCCAGAGCTCTATCCTGGTTACCTTGGACTAGGGGTGTTG TTCCAGAGCTCTATCCTGGTTGCCTTGGACTAGGGGTGTTG < 41bp 0.871162170759197 0.507669835657216 0.73018074 0.3434301 prediction 0.726984670203962 Functional Loss - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71233035 chr17:71233036 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3318 0 0 1 0 1 chromatin 0.438669269414768 0.438676358325901 0.46036148 0 hPsi_site_8735 iPseU_CNN:0.46036148;iRNA_PseU:0 8736 chr15 22742791 22742791 1 + A G UCEC 22742790 + 22742770 22742810 41 GATGCACGAGCAGGAGAAGATACGGGAGCAGGAAGAGAAGA GATGCACGAGCAGGAGAAGATGCGGGAGCAGGAAGAGAAGA < 41bp 0.871299396073943 0.507829881378601 0.6047402 0.2883431 prediction 0.726939029390683 Functional Loss - GOLGA6L1;GOLGA6L22 ENSG00000197414 CDS Human other chr15:22742790 chr15:22742791 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3319 0 0 0 0 0 unknown 0.438716145324637 0.438715163591786 0.2094804 0 hPsi_site_8736 iPseU_CNN:0.2094804;iRNA_PseU:0 8737 chr12 68051175 68051175 1 + A G rs192078400 68051174 + 68051154 68051194 41 CTGAACAAGCAATGAAGCAATACATGCAAAAACTCACAGCC CTGAACAAGCAATGAAGCAATGCATGCAAAAACTCACAGCC < 41bp 0.863440951403946 0.495014084140226 0.4509225 0.26991564 prediction 0.726881902807891 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68051174 chr12:68051175 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3320 0 0 1 0 0 Ribosome 0.439913956343354 0.437820241449985 0 0 hPsi_site_8737 iPseU_CNN:0;iRNA_PseU:0 8738 chr20 54972459 54972459 1 + A G rs111908795 54972458 + 54972438 54972478 41 CTATAGTAGAGATGGACAGTTAATAGCTACTGGGTCTGCTG CTATAGTAGAGATGGACAGTTGATAGCTACTGGGTCTGCTG < 41bp 0.870863162197914 0.507429969970505 0.8289264 0.5429298 prediction 0.726866384454818 Functional Loss - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54972458 chr20:54972459 synonymous SNV . 0 22 hPsi_associated_SNPs_3321 0 0 1 0 1 Cytosol 0.438717146722546 0.438745211796265 0.5719932 0 hPsi_site_8738 iPseU_CNN:0.5719932;iRNA_PseU:0 8739 chr9 100416135 100416135 1 + A G UCEC 100416134 + 100416114 100416154 41 CCCCTCACATTGATGTGATGTACACAACACTCCTCATTGAA CCCCTCACATTGATGTGATGTGCACAACACTCCTCATTGAA < 41bp 0.881575800363204 0.518172062714385 0.8509195 0.30161905 prediction 0.726807475297639 Functional Loss - NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100416134 chr9:100416135 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3322 0 0 1 0 2 Nucleus 0.438776206281152 0.439545421576503 0.701839 0 hPsi_site_8739 iPseU_CNN:0.701839;iRNA_PseU:0 8740 chr9 131669814 131669814 1 + A G HNSC 131669813 + 131669793 131669833 41 GACTGCACTGGTTTGCCAAGTACTTCCCCTACCTGGTGCTT GACTGCACTGGTTTGCCAAGTGCTTCCCCTACCTGGTGCTT < 41bp 0.880564049929548 0.517165220479517 0.7554054 0.32583976 prediction 0.726797658900062 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669813 chr9:131669814 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3323 0 0 1 0 0 Endoplasmic reticulum 0.438718585021215 0.43871870896238 0.5108108 0 hPsi_site_8740 iPseU_CNN:0.5108108;iRNA_PseU:0 8741 chrX 50658984 50658984 1 + A G LUAD 50658983 + 50658963 50659003 41 AACGCTTGGAAAGAGATGGATATCACACAACTTGTTCAGCA AACGCTTGGAAAGAGATGGATGTCACACAACTTGTTCAGCA < 41bp 0.863360860345069 0.492168907368033 0.55869085 0.26256695 prediction 0.726721720690139 Functional Loss - BMP15 ENSG00000130385 CDS Human protein_coding chrX:50658983 chrX:50658984 nonsynonymous SNV 0.409 0 22 hPsi_associated_SNPs_3324 0 0 0 0 0 exosome 0.436976985460111 0.439396321586147 0.1173817 0 hPsi_site_8741 iPseU_CNN:0.1173817;iRNA_PseU:0 8742 chr3 139069822 139069822 1 + A G HNSC 139069821 + 139069801 139069841 41 TCTGCTGTGTGGTTTTAGACTATGTATAGCCAGGACAGGCA TCTGCTGTGTGGTTTTAGACTGTGTATAGCCAGGACAGGCA < 41bp 0.864427275050016 0.501137557338945 0.14934456 0.15796757 prediction 0.726579435422142 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139069821 chr3:139069822 nonsynonymous SNV 0.969 1 22 hPsi_associated_SNPs_3325 1 0 1 0 2 Ribosome 0.438718561731189 0.438714319167359 0 0 hPsi_site_8742 iPseU_CNN:0;iRNA_PseU:0 8743 chr10 17276765 17276765 1 + A G STAD 17276764 + 17276744 17276784 41 CAAAGCAGGAGTCCACTGAGTACCGGAGACAGGTGCAGTCC CAAAGCAGGAGTCCACTGAGTGCCGGAGACAGGTGCAGTCC < 41bp 0.863268671958155 0.479278130740881 0.39842543 0.20323667 prediction 0.726537343916309 Functional Loss - VIM ENSG00000026025 CDS Human protein_coding chr10:17276764 chr10:17276765 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3326 0 0 1 0 2 Ribosome 0.43871336189459 0.438713181972547 0 0 hPsi_site_8743 iPseU_CNN:0;iRNA_PseU:0 8744 chr18 60241759 60241759 1 + A G LUAD 60241758 + 60241738 60241778 41 GCATCTTACAGTTCAGAGGCTAAAGTTGCCACCACCACAGG GCATCTTACAGTTCAGAGGCTGAAGTTGCCACCACCACAGG < 41bp 0.876536424917541 0.513288423868239 0.449746 0.2249893 prediction 0.726496002098604 Functional Loss - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60241758 chr18:60241759 synonymous SNV . 0 22 hPsi_associated_SNPs_3327 0 0 1 0 0 chromatin 0.438706800908187 0.438725390671418 0 0 hPsi_site_8744 iPseU_CNN:0;iRNA_PseU:0 8745 chr17 42979825 42979825 1 + A G STAD 42979824 + 42979804 42979844 41 GCCAGAGCGCTACCAGGCTCTACTGCAGCTTGGGGGTCCAA GCCAGAGCGCTACCAGGCTCTGCTGCAGCTTGGGGGTCCAA < 41bp 0.863237771915042 0.484245454939991 0.60451204 0.20714879 prediction 0.726475543830084 Functional Loss - CCDC103 ENSG00000167131 CDS Human protein_coding chr17:42979824 chr17:42979825 synonymous SNV . 0 22 hPsi_associated_SNPs_3328 0 0 0 0 2 exosome 0.43874804964866 0.439173247426352 0.20902408 0 hPsi_site_8745 iPseU_CNN:0.20902408;iRNA_PseU:0 8746 chr3 11076341 11076341 1 + A G COAD 11076340 + 11076320 11076360 41 CCATGGTCCTCATCCCCGGGTACATGGCCTACATGTTCCTC CCATGGTCCTCATCCCCGGGTGCATGGCCTACATGTTCCTC < 41bp 0.880255195143195 0.51704018155761 0.70699126 0.26839387 prediction 0.72643002717117 Functional Loss - SLC6A1 ENSG00000157103 CDS Human protein_coding chr3:11076340 chr3:11076341 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_3329 0 0 0 0 1 Endoplasmic reticulum 0.43871859224667 0.438718592974065 0.41398252 0 hPsi_site_8746 iPseU_CNN:0.41398252;iRNA_PseU:0 8747 chr7 44149646 44149646 1 + A G UCEC 44149645 + 44149625 44149665 41 ATTGGGATGGAGTCACACCGTATTGAGGACAACCAGATCCG ATTGGGATGGAGTCACACCGTGTTGAGGACAACCAGATCCG < 41bp 0.863178207464628 0.473272709025493 0.6908792 0.39634094 prediction 0.726356414929257 Functional Loss - AEBP1 ENSG00000106624 CDS Human protein_coding chr7:44149645 chr7:44149646 nonsynonymous SNV 0.987 2 22 hPsi_associated_SNPs_3330 0 0 0 0 1 Endoplasmic reticulum 0.438995321624115 0.438900047765016 0.3817584 0 hPsi_site_8747 iPseU_CNN:0.3817584;iRNA_PseU:0 8748 chr8 68031019 68031019 1 + A G LUAD 68031018 + 68030998 68031038 41 GTACAGCCTGCAGCTTATGTTAGTGCTCCTGTCACCCACCA GTACAGCCTGCAGCTTATGTTGGTGCTCCTGTCACCCACCA < 41bp 0.863171421287847 0.484922855583535 0.6928245 0.23124683 prediction 0.726342842575694 Functional Loss - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68031018 chr8:68031019 nonsynonymous SNV 0.944 0 22 hPsi_associated_SNPs_3331 0 0 1 0 2 Cytosol 0.43889864649569 0.438718312753273 0.385649 0 hPsi_site_8748 iPseU_CNN:0.385649;iRNA_PseU:0 8749 chr17 902102 902102 1 + A G COAD 902101 + 902081 902121 41 GACCCTAAGGATCCTTACCGTACACCGACTGCAAAAGAAGT GACCCTAAGGATCCTTACCGTGCACCGACTGCAAAAGAAGT < 41bp 0.863144419409912 0.47633094940282 0.89749527 0.33232278 prediction 0.726288838819823 Functional Loss - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:902101 chr17:902102 nonsynonymous SNV 0.933 1 22 hPsi_associated_SNPs_3332 0 0 1 0 1 Cytosol 0.438791235043379 0.438710250804304 0.79499054 0 hPsi_site_8749 iPseU_CNN:0.79499054;iRNA_PseU:0 8750 chr4 96761843 96761843 1 + A G COAD 96761842 + 96761822 96761862 41 GCATTGCTCTGGCCTGTAAATATAAAGGAAACGATGAGATC GCATTGCTCTGGCCTGTAAATGTAAAGGAAACGATGAGATC < 41bp 0.865046069213977 0.501941417482782 0.41953504 0.32575068 prediction 0.726209303462391 Functional Loss - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761842 chr4:96761843 nonsynonymous SNV 0.024 5 22 hPsi_associated_SNPs_3333 0 0 0 0 0 unknown 0.438722528261137 0.438724917154697 0 0 hPsi_site_8750 iPseU_CNN:0;iRNA_PseU:0 8751 chr9 116812206 116812206 1 + A G STAD 116812205 + 116812185 116812225 41 GGCTAGGCAAAAATGAAGTGTACGATTACCTGCAGGAGCCC GGCTAGGCAAAAATGAAGTGTGCGATTACCTGCAGGAGCCC < 41bp 0.863098724417698 0.491091657926908 0.67577 0.38516152 prediction 0.726197448835396 Functional Loss - ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116812205 chr9:116812206 nonsynonymous SNV 0.968 3 22 hPsi_associated_SNPs_3334 0 0 1 0 0 Cytosol 0.438695060821552 0.438718591007375 0.35154 0 hPsi_site_8751 iPseU_CNN:0.35154;iRNA_PseU:0 8752 chr1 62916336 62916336 1 + A G rs530641299 62916335 + 62916315 62916355 41 GCAAAGCAGATTATGAGCTATACAACAAAGCCTCTAATCCT GCAAAGCAGATTATGAGCTATGCAACAAAGCCTCTAATCCT < 41bp 0.867968912942956 0.504887809541448 0.59655225 0.32059422 prediction 0.726162206803016 Functional Loss - USP1 ENSG00000162607 CDS Human protein_coding chr1:62916335 chr1:62916336 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3335 0 0 1 0 0 Ribosome 0.438662146396279 0.436909400092288 0.1931045 0 hPsi_site_8752 iPseU_CNN:0.1931045;iRNA_PseU:0 8753 chr2 18112637 18112637 1 + A G rs147163003 18112636 + 18112616 18112656 41 ATTCTTGCTGCAGCAATCGCTACCAGGAACGCAAGGAGGAA ATTCTTGCTGCAGCAATCGCTGCCAGGAACGCAAGGAGGAA < 41bp 0.876344427574698 0.513266189087767 0.6572396 0.27645877 prediction 0.726156476973862 Functional Loss - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18112636 chr2:18112637 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3336 0 0 0 0 0 Cytosol 0.438738848164479 0.438775263572238 0.3144792 0 hPsi_site_8753 iPseU_CNN:0.3144792;iRNA_PseU:0 8754 chr15 69548338 69548338 1 + A G rs12440300 69548337 + 69548317 69548357 41 GCATCTGAGAGTAACAACTATATGAACCACGTGGCCAAACA GCATCTGAGAGTAACAACTATGTGAACCACGTGGCCAAACA < 41bp 0.871385177163981 0.50842646820643 0.70603395 0.5523389 prediction 0.725917417915103 Functional Loss - GLCE ENSG00000138604 CDS Human protein_coding chr15:69548337 chr15:69548338 nonsynonymous SNV 0.353 0 22 hPsi_associated_SNPs_3337 0 0 1 0 0 Ribosome 0.437672830501119 0.439427549699703 0.3073901 0 hPsi_site_8754 iPseU_CNN:0.3073901;iRNA_PseU:0 8755 chr19 41307019 41307019 1 + A G LUAD 41307018 + 41306998 41307038 41 CCGAGCGCCTGGCCCTGGACTATATCGTGCCCTGCATGCGG CCGAGCGCCTGGCCCTGGACTGTATCGTGCCCTGCATGCGG < 41bp 0.879353997294736 0.51643013704824 0.6165508 0.28850538 prediction 0.725847720492992 Functional Loss - EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41307018 chr19:41307019 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3338 0 0 1 0 0 chromatin 0.438718590724021 0.438718585981824 0.2331016 0 hPsi_site_8755 iPseU_CNN:0.2331016;iRNA_PseU:0 8756 chr7 7612802 7612802 1 + A G UCEC 7612801 + 7612781 7612821 41 AGCTGTTCAGGGTGTGACGGTAGACCCATATTTCCACGATC AGCTGTTCAGGGTGTGACGGTGGACCCATATTTCCACGATC < 41bp 0.874264912256546 0.511374717487065 0.7420675 0.35713744 prediction 0.725780389538963 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7612801 chr7:7612802 synonymous SNV . 0 22 hPsi_associated_SNPs_3339 0 0 1 0 0 Nucleus 0.438691769094628 0.438719636952545 0.484135 0 hPsi_site_8756 iPseU_CNN:0.484135;iRNA_PseU:0 8757 chr4 6596367 6596367 1 + A G UCEC 6596366 + 6596346 6596386 41 AGCTCGGTGTCTCGGTGCAGTATGCCACGCTGGGCGACTAC AGCTCGGTGTCTCGGTGCAGTGTGCCACGCTGGGCGACTAC < 41bp 0.862843832085366 0.468309214093505 0.73475856 0.40050486 prediction 0.725687664170732 Functional Loss - MAN2B2 ENSG00000013288 CDS Human protein_coding chr4:6596366 chr4:6596367 nonsynonymous SNV 0.448 4 22 hPsi_associated_SNPs_3340 0 0 0 0 2 Endoplasmic reticulum 0.437581904038535 0.438297900037832 0.46951712 0 hPsi_site_8757 iPseU_CNN:0.46951712;iRNA_PseU:0 8758 chr15 64449054 64449054 1 + T C HNSC 64449055 - 64449035 64449075 41 AGAACTTCAAACTGAAGCACTACGGGCCTGGCTGGGTGAGC AGAACTTCAAACTGAAGCACTGCGGGCCTGGCTGGGTGAGC < 41bp 0.862838654473336 0.494723411408999 0.38305777 0.24724141 prediction 0.725677308946672 Functional Loss - PPIB ENSG00000166794 CDS Human protein_coding chr15:64449055 chr15:64449054 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_3341 0 0 1 0 1 Ribosome 0.438718593439102 0.438718594022603 0 0 hPsi_site_8758 iPseU_CNN:0;iRNA_PseU:0 8759 chr17 27183340 27183340 1 + A G UCEC 27183339 + 27183319 27183359 41 GCCTGAGAATTCCCGGGTCCTACGAGTGGTCCTCCTGGGAG GCCTGAGAATTCCCGGGTCCTGCGAGTGGTCCTCCTGGGAG < 41bp 0.862826402861778 0.47264657537434 0.69914037 0.24443164 prediction 0.725652805723557 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27183339 chr17:27183340 synonymous SNV . 0 22 hPsi_associated_SNPs_3342 0 0 1 0 2 Ribosome 0.438676236315955 0.438718813135658 0.39828074 0 hPsi_site_8759 iPseU_CNN:0.39828074;iRNA_PseU:0 8760 chr17 37667817 37667817 1 + A G OV 37667816 + 37667796 37667836 41 ACAAAGTCATTACTTTGTGGTACCGACCTCCAGAACTACTG ACAAAGTCATTACTTTGTGGTGCCGACCTCCAGAACTACTG < 41bp 0.862825048119485 0.472526738327607 0.31711996 0.12940148 prediction 0.725650096238969 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37667816 chr17:37667817 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_3343 0 0 1 0 2 Nucleus 0.438718505401382 0.438718594352886 0 0 hPsi_site_8760 iPseU_CNN:0;iRNA_PseU:0 8761 chr6 150111138 150111138 1 + A G LGG 150111137 + 150111117 150111157 41 GATCAGTTGCATGAAGGAGCTAAAGCTCTTGATGTAGGATC GATCAGTTGCATGAAGGAGCTGAAGCTCTTGATGTAGGATC < 41bp 0.862817518157352 0.492208581475278 0.3054976 0.30089733 prediction 0.725635036314703 Functional Loss - PCMT1 ENSG00000120265 CDS Human protein_coding chr6:150111137 chr6:150111138 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3344 0 0 1 0 2 Ribosome 0.438706793048628 0.438718021332659 0 0 hPsi_site_8761 iPseU_CNN:0;iRNA_PseU:0 8762 chrX 70357667 70357667 1 + A G UCEC 70357666 + 70357646 70357686 41 CCAGCTACTCCAGCCAGCCTTACCAGAGCACCCACCCTTCT CCAGCTACTCCAGCCAGCCTTGCCAGAGCACCCACCCTTCT < 41bp 0.862777052022687 0.487993728063045 0.37823206 0.2873962 prediction 0.725554104045375 Functional Loss - MED12 ENSG00000184634 CDS Human protein_coding chrX:70357666 chrX:70357667 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3345 0 0 0 0 1 Cytosol 0.439007330169922 0.437634615005428 0 0 hPsi_site_8762 iPseU_CNN:0;iRNA_PseU:0 8763 chr16 68390642 68390642 1 + A G COAD 68390641 + 68390621 68390661 41 CAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGC CAGCGGTGCTATGGATGGAGTGCCACCTGACCCCGGAGTGC < 41bp 0.88583980976948 0.523079850227554 0.39733657 0.29665148 prediction 0.725519919083852 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390641 chr16:68390642 nonsynonymous SNV 0.862 4 22 hPsi_associated_SNPs_3346 0 0 1 0 1 Nucleus 0.438540248378063 0.438695530210272 0 0 hPsi_site_8763 iPseU_CNN:0;iRNA_PseU:0 8764 chr12 95676294 95676294 1 + A G LUSC 95676293 + 95676273 95676313 41 GCAGCTATGAGTTCTATCGGTACTTTGAAACTCAGCACCAG GCAGCTATGAGTTCTATCGGTGCTTTGAAACTCAGCACCAG < 41bp 0.868017124242422 0.505284359237668 0.8914813 0.4685576 prediction 0.725465530009508 Functional Loss - VEZT ENSG00000028203 CDS Human protein_coding chr12:95676293 chr12:95676294 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3347 0 0 1 0 0 Endoplasmic reticulum 0.43871862197103 0.438718605659547 0.7829626 0 hPsi_site_8764 iPseU_CNN:0.7829626;iRNA_PseU:0 8765 chr17 30611700 30611700 1 + A G UCEC 30611699 + 30611679 30611719 41 TTGACCCTGGGAACACAGGCTACATTAGCACAGGCAAGTTC TTGACCCTGGGAACACAGGCTGCATTAGCACAGGCAAGTTC < 41bp 0.86271612628701 0.476715719896005 0.57057947 0.3318596 prediction 0.725432252574021 Functional Loss - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30611699 chr17:30611700 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_3348 0 0 0 0 1 cytosol 0.438702234357412 0.438672463837158 0.14115894 0 hPsi_site_8765 iPseU_CNN:0.14115894;iRNA_PseU:0 8766 chr9 72746492 72746492 1 + A G STAD 72746491 + 72746471 72746511 41 GGTTATGTTGCCCTGGATGATATTTCATTCTCTCCTGTTCA GGTTATGTTGCCCTGGATGATGTTTCATTCTCTCCTGTTCA < 41bp 0.862636339337037 0.482643529300255 0.51078737 0.37162614 prediction 0.725272678674074 Functional Loss - MAMDC2 ENSG00000165072 CDS Human protein_coding chr9:72746491 chr9:72746492 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_3349 0 0 0 1 2 nucleus 0.438718566688164 0.438718592251556 0.0215747399999999 0 hPsi_site_8766 iPseU_CNN:0.0215747399999999;iRNA_PseU:0 8767 chr11 45949132 45949132 1 + A G STAD 45949131 + 45949111 45949151 41 TCCTGCCTGCCTATTCTCTCTACGACTACCTCAGGTGGGCC TCCTGCCTGCCTATTCTCTCTGCGACTACCTCAGGTGGGCC < 41bp 0.862592504771438 0.482625870764725 0.53377646 0.23030439 prediction 0.725185009542875 Functional Loss - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949131 chr11:45949132 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3350 0 0 0 0 1 chromatin 0.438718739685485 0.438718596907304 0.06755292 0 hPsi_site_8767 iPseU_CNN:0.06755292;iRNA_PseU:0 8768 chr20 36150782 36150782 1 + A G UCEC 36150781 + 36150761 36150801 41 TGTTCCTGGAATGCTGCATTTACTGGGTAGGATTCGCTTTT TGTTCCTGGAATGCTGCATTTGCTGGGTAGGATTCGCTTTT < 41bp 0.873136380687899 0.510559264902129 0.5768075 0.25192505 prediction 0.725154231571539 Functional Loss - NNAT ENSG00000053438 CDS Human protein_coding chr20:36150781 chr20:36150782 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3351 0 0 0 0 2 exosome 0.43871859299601 0.438718592996372 0.153615 0 hPsi_site_8768 iPseU_CNN:0.153615;iRNA_PseU:0 8769 chr20 30745754 30745754 1 + A G STAD 30745753 + 30745733 30745773 41 AGATCCCCGAGCAGCGGTGGTACATGAACCGATTTGTGGGG AGATCCCCGAGCAGCGGTGGTGCATGAACCGATTTGTGGGG < 41bp 0.884114753015056 0.521579419662058 0.6947377 0.18410856 prediction 0.725070666705997 Functional Loss - TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30745753 chr20:30745754 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3352 0 0 1 0 1 Nucleus 0.438717821171233 0.438718578638485 0.3894754 0 hPsi_site_8769 iPseU_CNN:0.3894754;iRNA_PseU:0 8770 chr20 62891424 62891424 1 + A G UCEC 62891423 + 62891403 62891443 41 GTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTA GTAGAGCAGGCTTTCAGAGCTGTCGATCGTGCAGACTATTA < 41bp 0.862512268221309 0.490829225224317 0.44734874 0.2692451 prediction 0.725024536442618 Functional Loss - PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62891423 chr20:62891424 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_3353 0 0 1 0 0 Ribosome 0.438723758973482 0.439058749618511 0 0 hPsi_site_8770 iPseU_CNN:0;iRNA_PseU:0 8771 chr17 39261879 39261879 1 + A G CESC 39261878 + 39261858 39261898 41 CCTGTTGCAGGACCACCTGCTACCGCCCCAGCTGTTGTGTG CCTGTTGCAGGACCACCTGCTGCCGCCCCAGCTGTTGTGTG < 41bp 0.862448213439928 0.490787829518673 0.5456159 0.26745573 prediction 0.724896426879856 Functional Loss - KRTAP4-9 ENSG00000212722 CDS Human protein_coding chr17:39261878 chr17:39261879 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_3354 0 0 0 0 0 unknown 0.438718375232133 0.438706629392336 0.0912318000000001 0 hPsi_site_8771 iPseU_CNN:0.0912318000000001;iRNA_PseU:0 8772 chr11 82882913 82882913 1 + A G UCEC 82882912 + 82882892 82882932 41 TGGTCAAGGACAACAGTTTTTACCAGTTCATCCACAAAATC TGGTCAAGGACAACAGTTTTTGCCAGTTCATCCACAAAATC < 41bp 0.862438960037008 0.485594270154137 0.31047004 0.21215633 prediction 0.724877920074016 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82882912 chr11:82882913 synonymous SNV . 0 22 hPsi_associated_SNPs_3355 0 0 1 0 2 Nucleus 0.439402928749635 0.43849590442913 0 0 hPsi_site_8772 iPseU_CNN:0;iRNA_PseU:0 8773 chr5 68805125 68805125 1 + A G LUSC 68805124 + 68805104 68805144 41 GGAGTGATTCGGATCCTGTCTATGCTCATTATTGTGATGTG GGAGTGATTCGGATCCTGTCTGTGCTCATTATTGTGATGTG < 41bp 0.862428379919135 0.487202865805495 0.32386106 0.26345432 prediction 0.724856759838271 Functional Loss - OCLN ENSG00000197822 CDS Human protein_coding chr5:68805124 chr5:68805125 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3356 0 0 1 0 1 cytosol 0.438737985670908 0.439301071802397 0 0 hPsi_site_8773 iPseU_CNN:0;iRNA_PseU:0 8774 chr1 193038651 193038651 1 + A G LUSC 193038650 + 193038630 193038670 41 GGAAGGCTATAGCGGACTGGTACAATGAGAAAGGTGGCATG GGAAGGCTATAGCGGACTGGTGCAATGAGAAAGGTGGCATG < 41bp 0.862345214677857 0.490939227465744 0.7268474 0.3393042 prediction 0.724690429355714 Functional Loss - TROVE2 ENSG00000116747 CDS Human protein_coding chr1:193038650 chr1:193038651 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3357 0 0 1 0 0 Ribosome 0.438718605023862 0.438718638241839 0.4536948 0 hPsi_site_8774 iPseU_CNN:0.4536948;iRNA_PseU:0 8775 chr11 20673878 20673878 1 + A G rs143918578 20673877 + 20673857 20673897 41 ACCAGTGGGAGCCCATGACCTATGGCTCTTACCGCTATCCT ACCAGTGGGAGCCCATGACCTGTGGCTCTTACCGCTATCCT < 41bp 0.862307573183993 0.469943608242829 0.4976857 0.48791152 prediction 0.724615146367985 Functional Loss - SLC6A5 ENSG00000165970 CDS Human protein_coding chr11:20673877 chr11:20673878 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3358 0 0 0 0 1 unknown 0.438718592994684 0.438718592993459 0 0 hPsi_site_8775 iPseU_CNN:0;iRNA_PseU:0 8776 chr1 113655223 113655223 1 + A G PRAD 113655222 + 113655202 113655242 41 TCCTGGCAGAAAGATGGTGGTACTGACTTTCCTGCGGCTCG TCCTGGCAGAAAGATGGTGGTGCTGACTTTCCTGCGGCTCG < 41bp 0.887908447660088 0.525609751540099 0.7190696 0.34800732 prediction 0.724597392239978 Functional Loss - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113655222 chr1:113655223 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3359 0 0 1 0 0 Nucleus 0.438717614659532 0.438711978163986 0.4381392 0 hPsi_site_8776 iPseU_CNN:0.4381392;iRNA_PseU:0 8777 chr4 41984512 41984512 1 + A G UCEC 41984511 + 41984491 41984531 41 TTGGCCCAGCAGTTTGCTAGTACGGCTCCTTTGCTGTTTAA TTGGCCCAGCAGTTTGCTAGTGCGGCTCCTTTGCTGTTTAA < 41bp 0.862285039208439 0.499344979625979 0.73500144 0.44544864 prediction 0.724570078416878 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984511 chr4:41984512 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_3360 0 0 0 0 0 Nucleus 0.438718482834714 0.438718592772064 0.47000288 0 hPsi_site_8777 iPseU_CNN:0.47000288;iRNA_PseU:0 8778 chr2 234183368 234183368 1 + A G rs2241880 234183367 + 234183347 234183387 41 GTCCCCCAGGACAATGTGGATACTCATCCTGGTTCTGGTAA GTCCCCCAGGACAATGTGGATGCTCATCCTGGTTCTGGTAA < 41bp 0.873272691703125 0.511042185301014 0.2786009 0.16510892 prediction 0.724461012804223 Functional Loss - ATG16L1 ENSG00000085978 CDS Human protein_coding chr2:234183367 chr2:234183368 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_3361 2 1 1 0 2 Ribosome 0.438717277730346 0.438767591710225 0 0 hPsi_site_8778 iPseU_CNN:0;iRNA_PseU:0 8779 chr18 76755040 76755040 1 + A G UCEC 76755039 + 76755019 76755059 41 TGCAGGCGAGGGTGCTCCACTATGGGTAATTTAAAACAGCA TGCAGGCGAGGGTGCTCCACTGTGGGTAATTTAAAACAGCA < 41bp 0.865104914978631 0.502924194208377 0.2334539 0.17392427 prediction 0.724361441540507 Functional Loss - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76755039 chr18:76755040 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3362 0 0 0 0 0 exosome 0.438718592992158 0.438718592995262 0 0 hPsi_site_8779 iPseU_CNN:0;iRNA_PseU:0 8780 chr14 76948398 76948398 1 + A G UCEC 76948397 + 76948377 76948417 41 TGCGTGGAGGCCGTCAGAAATACAAGCGACGGCTGGACTCA TGCGTGGAGGCCGTCAGAAATGCAAGCGACGGCTGGACTCA < 41bp 0.878372954825379 0.516233776723793 0.5383979 0.3801736 prediction 0.724278356203172 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76948397 chr14:76948398 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3363 0 0 1 0 2 Nucleus 0.438777283656206 0.43873637012517 0.0767958 0 hPsi_site_8780 iPseU_CNN:0.0767958;iRNA_PseU:0 8781 chr13 26974629 26974629 1 + A G UCEC 26974628 + 26974608 26974648 41 ATGGACCCAATAAAGCGAATTACCTCAGAACAGGCTATGCA ATGGACCCAATAAAGCGAATTGCCTCAGAACAGGCTATGCA < 41bp 0.86211516658228 0.479323535504188 0.25329104 0.17653269 prediction 0.72423033316456 Functional Loss - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26974628 chr13:26974629 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3364 0 0 1 0 1 Cytosol 0.438677139466801 0.438619155890692 0 0 hPsi_site_8781 iPseU_CNN:0;iRNA_PseU:0 8782 chr20 33764024 33764024 1 + A G UCS 33764023 + 33764003 33764043 41 GAGCTGCCTCCCGAGGGCTCTAGAGCCCATGTCTTCTTCGA GAGCTGCCTCCCGAGGGCTCTGGAGCCCATGTCTTCTTCGA < 41bp 0.886821005724334 0.524738369738571 0.62393576 0.18640548 prediction 0.724165271971526 Functional Loss - PROCR ENSG00000101000 CDS Human protein_coding chr20:33764023 chr20:33764024 nonsynonymous SNV 0.462 0 22 hPsi_associated_SNPs_3365 0 0 1 0 1 Endoplasmic reticulum 0.438381466617744 0.439029032714817 0.24787152 0 hPsi_site_8782 iPseU_CNN:0.24787152;iRNA_PseU:0 8783 chr6 44275065 44275065 1 + A G STAD 44275064 + 44275044 44275084 41 TGTGGTCAGCCACCACGCGGTACGCTGTGTCTGTGCGCCCC TGTGGTCAGCCACCACGCGGTGCGCTGTGTCTGTGCGCCCC < 41bp 0.889925747033172 0.527883043203302 0.91261303 0.4309907 prediction 0.724085407659739 Functional Loss - AARS2 ENSG00000124608 CDS Human protein_coding chr6:44275064 chr6:44275065 nonsynonymous SNV 0.493 4 22 hPsi_associated_SNPs_3366 0 0 0 0 1 Endoplasmic reticulum 0.438721272384912 0.438685441783804 0.82522606 0 hPsi_site_8783 iPseU_CNN:0.82522606;iRNA_PseU:0 8784 chr8 42587251 42587251 1 + A G UCEC 42587250 + 42587230 42587270 41 TGAAGGAGAAAAACTTTCATTATCCACATCGGTCTTGGTTT TGAAGGAGAAAAACTTTCATTGTCCACATCGGTCTTGGTTT < 41bp 0.862040341734638 0.487069533801467 0.3482309 0.31311655 prediction 0.724080683469276 Functional Loss - CHRNB3 ENSG00000147432 CDS Human protein_coding chr8:42587250 chr8:42587251 synonymous SNV . 0 22 hPsi_associated_SNPs_3367 0 0 0 0 0 exosome 0.439073131968266 0.439887343632518 0 0 hPsi_site_8784 iPseU_CNN:0;iRNA_PseU:0 8785 chr19 36207128 36207128 1 + A G LUSC 36207127 + 36207107 36207147 41 CTCCTGCTCGGTCTCGGCCCTATGCGTGCTCTGTCTGTGGA CTCCTGCTCGGTCTCGGCCCTGTGCGTGCTCTGTCTGTGGA < 41bp 0.862038676325861 0.4833532770467 0.69525826 0.44702134 prediction 0.724077352651722 Functional Loss - ZBTB32 ENSG00000011590 CDS Human protein_coding chr19:36207127 chr19:36207128 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_3368 0 0 0 0 2 nucleus 0.438736502926745 0.43891524929777 0.39051652 0 hPsi_site_8785 iPseU_CNN:0.39051652;iRNA_PseU:0 8786 chr1 155288033 155288033 1 + A G GBM 155288032 + 155288012 155288052 41 TCTACCGCCTGCTGAAGCTCTATTGCCGGGAGCAGCCCTAT TCTACCGCCTGCTGAAGCTCTGTTGCCGGGAGCAGCCCTAT < 41bp 0.862005083832015 0.46159606665951 0.43784612 0.22469038 prediction 0.724010167664029 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155288032 chr1:155288033 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3369 0 0 1 0 2 Cytosol 0.438801704852976 0.438750169480653 0 0 hPsi_site_8786 iPseU_CNN:0;iRNA_PseU:0 8787 chr19 4251044 4251044 1 + A G OV 4251043 + 4251023 4251063 41 GGTGTAAGACGTGCGGAGAATACATCTACAAGGGGAAGAAA GGTGTAAGACGTGCGGAGAATGCATCTACAAGGGGAAGAAA < 41bp 0.872617631985807 0.510618312148288 0.4986928 0.2832528 prediction 0.723998639675037 Functional Loss - CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4251043 chr19:4251044 nonsynonymous SNV 0.936 4 22 hPsi_associated_SNPs_3370 0 0 0 0 1 Ribosome 0.438718172678817 0.438728013909638 0 0 hPsi_site_8787 iPseU_CNN:0;iRNA_PseU:0 8788 chr2 102636197 102636197 1 + A G LUSC 102636196 + 102636176 102636216 41 TGGCCCTGGAAGATGCTGGCTATTACCGCTGTGTCCTGACA TGGCCCTGGAAGATGCTGGCTGTTACCGCTGTGTCCTGACA < 41bp 0.885098313476311 0.523151919560944 0.24862134 0.1728498 prediction 0.723892787830735 Functional Loss - IL1R2 ENSG00000115590 CDS Human protein_coding chr2:102636196 chr2:102636197 nonsynonymous SNV 0.902 4 22 hPsi_associated_SNPs_3371 0 0 0 0 1 Endoplasmic reticulum 0.438718594342242 0.438716254165631 0 0 hPsi_site_8788 iPseU_CNN:0;iRNA_PseU:0 8789 chr5 118969954 118969954 1 + A G UCEC 118969953 + 118969933 118969973 41 TCTGAGGTTGTGAGGGTAGGTACTCCCCCCTCTGATGTGTC TCTGAGGTTGTGAGGGTAGGTGCTCCCCCCTCTGATGTGTC < 41bp 0.861918010308816 0.476208576996515 0.8907201 0.29021865 prediction 0.723836020617633 Functional Loss - FAM170A ENSG00000164334 CDS Human protein_coding chr5:118969953 chr5:118969954 nonsynonymous SNV 0.109 0 22 hPsi_associated_SNPs_3372 0 0 0 0 1 exosome 0.438718592393544 0.438714912595601 0.7814402 0 hPsi_site_8789 iPseU_CNN:0.7814402;iRNA_PseU:0 8790 chr2 68607942 68607942 1 + A G UCEC 68607941 + 68607921 68607961 41 AGAGATGCCTGGGTTCGGGATATCAAGAAGGCCATTAAATG AGAGATGCCTGGGTTCGGGATGTCAAGAAGGCCATTAAATG < 41bp 0.861872727779425 0.473359815743004 0.639382 0.3402441 prediction 0.723745455558851 Functional Loss - PLEK ENSG00000115956 CDS Human protein_coding chr2:68607941 chr2:68607942 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_3373 0 0 0 0 1 exosome 0.438718756345124 0.438718650068742 0.278764 0 hPsi_site_8790 iPseU_CNN:0.278764;iRNA_PseU:0 8791 chr19 16942437 16942437 1 + A G STAD 16942436 + 16942416 16942456 41 CAAGAATGGCAAGTTAAACATACAGTCGCCTCTGACAAGCC CAAGAATGGCAAGTTAAACATGCAGTCGCCTCTGACAAGCC < 41bp 0.881234050873598 0.519361816424534 0.40908957 0.24504194 prediction 0.723744468898129 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16942436 chr19:16942437 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_3374 0 0 1 0 1 Cytosol 0.438598734053044 0.438718653766295 0 0 hPsi_site_8791 iPseU_CNN:0;iRNA_PseU:0 8792 chr3 46307353 46307353 1 + A G STAD 46307352 + 46307332 46307372 41 GGTGCCCCAGTAAAAAAAAGTACAAGGCCATCCGGCTCATT GGTGCCCCAGTAAAAAAAAGTGCAAGGCCATCCGGCTCATT < 41bp 0.861848213922679 0.482927125423438 0.67288667 0.24633232 prediction 0.723696427845358 Functional Loss - CCR3 ENSG00000183625 CDS Human protein_coding chr3:46307352 chr3:46307353 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_3375 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.34577334 0 hPsi_site_8792 iPseU_CNN:0.34577334;iRNA_PseU:0 8793 chr11 70279810 70279810 1 + A G UCEC 70279809 + 70279789 70279829 41 GGATCACAGCCGTCGCCCTGTACGACTACCAGGCTGGTGAG GGATCACAGCCGTCGCCCTGTGCGACTACCAGGCTGGTGAG < 41bp 0.861836143748568 0.472820769942852 0.75855815 0.3405211 prediction 0.723672287497135 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70279809 chr11:70279810 nonsynonymous SNV 0.854 4 22 hPsi_associated_SNPs_3376 0 0 1 0 2 Ribosome 0.438719894804005 0.438722909339983 0.5171163 0 hPsi_site_8793 iPseU_CNN:0.5171163;iRNA_PseU:0 8794 chr7 6621842 6621842 1 + A G SARC 6621841 + 6621821 6621861 41 GCCCTATCTGCTGCTAGGTGTAAACCTGTTTTTTTTCACCC GCCCTATCTGCTGCTAGGTGTGAACCTGTTTTTTTTCACCC < 41bp 0.861816124188186 0.474760150243669 0.724264 0.29523012 prediction 0.723632248376373 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6621841 chr7:6621842 synonymous SNV . 0 22 hPsi_associated_SNPs_3377 0 0 1 0 1 Cytosol 0.438712225590925 0.438718592962323 0.448528 0 hPsi_site_8794 iPseU_CNN:0.448528;iRNA_PseU:0 8795 chr6 20481472 20481472 1 + A G BLCA 20481471 + 20481451 20481491 41 TCAGAAAAAACGCGGTATGATACGTCTCTTGGTCTGCTCAC TCAGAAAAAACGCGGTATGATGCGTCTCTTGGTCTGCTCAC < 41bp 0.879817781467543 0.518012675899768 0.72672266 0.21512103 prediction 0.72361021113555 Functional Loss - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20481471 chr6:20481472 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3378 0 0 1 0 2 Cytosol 0.437560478354022 0.429548806470432 0.45344532 0 hPsi_site_8795 iPseU_CNN:0.45344532;iRNA_PseU:0 8796 chr4 184614781 184614781 1 + A G LUSC 184614780 + 184614760 184614800 41 AAACATTTCTGTACATCTGCTACATGAACCCCCTGCACTGA AAACATTTCTGTACATCTGCTGCATGAACCCCCTGCACTGA < 41bp 0.872356160714045 0.510555997374776 0.43534306 0.244807 prediction 0.723600326678538 Functional Loss - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184614780 chr4:184614781 synonymous SNV . 0 22 hPsi_associated_SNPs_3379 0 0 0 0 1 Cytosol 0.438734199933318 0.438796790944602 0 0 hPsi_site_8796 iPseU_CNN:0;iRNA_PseU:0 8797 chr8 59493127 59493127 1 + A G SKCM 59493126 + 59493106 59493146 41 TCTGGGACTGTAGTTACTATTACAATCATGCCTGCTTTTAT TCTGGGACTGTAGTTACTATTGCAATCATGCCTGCTTTTAT < 41bp 0.865860483711398 0.504129421362125 0.6243929 0.36697507 prediction 0.723462124698547 Functional Loss - SDCBP ENSG00000137575 CDS Human protein_coding chr8:59493126 chr8:59493127 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3380 0 0 0 0 2 Ribosome 0.438718847067178 0.43872137891131 0.2487858 0 hPsi_site_8797 iPseU_CNN:0.2487858;iRNA_PseU:0 8798 chr7 56051534 56051534 1 + A G LUSC 56051533 + 56051513 56051553 41 GCCAAGATCCGGACCTAATATATATGAACTCAGGTCTTACC GCCAAGATCCGGACCTAATATGTATGAACTCAGGTCTTACC < 41bp 0.861714445320325 0.488048675248399 0.2937112 0.25044256 prediction 0.72342889064065 Functional Loss - NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56051533 chr7:56051534 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3381 0 0 1 0 1 unknown 0.438718203112031 0.43871810170157 0 0 hPsi_site_8798 iPseU_CNN:0;iRNA_PseU:0 8799 chr6 33243782 33243782 1 + A G THCA 33243781 + 33243761 33243801 41 TTATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTC TTATGCAGAATCCACGCCAGTGCAAGATCCCAGACTGGTTC < 41bp 0.866239671433064 0.504526502966901 0.7331301 0.5372978 prediction 0.723426336932326 Functional Loss - RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243781 chr6:33243782 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_3382 0 0 1 2 2 Cytosol 0.438718601398824 0.438718701900961 0.3916646 0 hPsi_site_8799 iPseU_CNN:0.3916646;iRNA_PseU:0 8800 chr14 21966439 21966439 1 + T C COAD 21966440 - 21966420 21966460 41 TTGCACGGTTCAAGCAAAGGTACCCAGATGGTATCATCTCT TTGCACGGTTCAAGCAAAGGTGCCCAGATGGTATCATCTCT < 41bp 0.861712458922346 0.486825163778996 0.80532175 0.32850015 prediction 0.723424917844693 Functional Loss - METTL3 ENSG00000165819 CDS Human protein_coding chr14:21966440 chr14:21966439 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3383 0 0 1 0 1 Nucleus 0.438718581393202 0.438718566856944 0.6106435 0 hPsi_site_8800 iPseU_CNN:0.6106435;iRNA_PseU:0 8801 chr2 18113214 18113214 1 + A G LUAD 18113213 + 18113193 18113233 41 CTCGGTAGGACTTCGGTCTCTAGGTGCCACACTGAGACACA CTCGGTAGGACTTCGGTCTCTGGGTGCCACACTGAGACACA < 41bp 0.879221077017546 0.51757012701479 0.70352894 0.23638651 prediction 0.723301900005513 Functional Loss - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18113213 chr2:18113214 synonymous SNV . 0 22 hPsi_associated_SNPs_3384 0 0 0 0 0 Cytosol 0.438730864666343 0.437268217568632 0.40705788 0 hPsi_site_8801 iPseU_CNN:0.40705788;iRNA_PseU:0 8802 chr1 171755174 171755174 1 + A G LUAD 171755173 + 171755153 171755193 41 ATCCAAGCTGAGCTGTCGGCTAGAGTCATGGAGCTGGCCCC ATCCAAGCTGAGCTGTCGGCTGGAGTCATGGAGCTGGCCCC < 41bp 0.885257682341593 0.523624313799055 0.5785058 0.42940554 prediction 0.723266737085074 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171755173 chr1:171755174 nonsynonymous SNV 0.868 0 22 hPsi_associated_SNPs_3385 0 0 1 0 1 Ribosome 0.438718589687903 0.438718560507033 0.1570116 0 hPsi_site_8802 iPseU_CNN:0.1570116;iRNA_PseU:0 8803 chr19 47111573 47111573 1 + A G HNSC 47111572 + 47111552 47111592 41 ACTGAAGCAGAGCTGCAGGATATGATCAATGAGGTGGATGC ACTGAAGCAGAGCTGCAGGATGTGATCAATGAGGTGGATGC < 41bp 0.861631170560982 0.479323780464161 0.33471835 0.25989074 prediction 0.723262341121964 Functional Loss - CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111572 chr19:47111573 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3386 0 0 1 0 1 Ribosome 0.438621786664761 0.438311732004933 0 0 hPsi_site_8803 iPseU_CNN:0;iRNA_PseU:0 8804 chr17 48148253 48148253 1 + A G KIRP 48148252 + 48148232 48148272 41 AGGAGTGGGACTTATCTGAGTATAGTTACAAGGACCCAGAG AGGAGTGGGACTTATCTGAGTGTAGTTACAAGGACCCAGAG < 41bp 0.861625736892372 0.488341848427995 0.44825092 0.3166613 prediction 0.723251473784744 Functional Loss - ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48148252 chr17:48148253 nonsynonymous SNV 0.966 1 22 hPsi_associated_SNPs_3387 0 0 1 0 2 Cytosol 0.438703173871164 0.438685718806332 0 0 hPsi_site_8804 iPseU_CNN:0;iRNA_PseU:0 8805 chr1 25678158 25678158 1 + A G STAD 25678157 + 25678137 25678177 41 GACAAGTCCGAGGTGATAGTTACAGTGAAGGTTGTCTGGGT GACAAGTCCGAGGTGATAGTTGCAGTGAAGGTTGTCTGGGT < 41bp 0.879578409729008 0.518023881480251 0.73539245 0.46814322 prediction 0.723109056497515 Functional Loss - TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25678157 chr1:25678158 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3388 0 0 1 0 2 Ribosome 0.438727811703397 0.438696276320194 0.4707849 0 hPsi_site_8805 iPseU_CNN:0.4707849;iRNA_PseU:0 8806 chr2 33036236 33036236 1 + A G UCEC 33036235 + 33036215 33036255 41 ATGGAGAAATCTGGAGGCTGTATGCCCACGTATATGGAAAT ATGGAGAAATCTGGAGGCTGTGTGCCCACGTATATGGAAAT < 41bp 0.871895378220177 0.510357885027185 0.6967365 0.3973526 prediction 0.723074986385983 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33036235 chr2:33036236 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_3389 0 0 1 0 0 Nucleus 0.438529337701877 0.438709717545784 0.393473 0 hPsi_site_8806 iPseU_CNN:0.393473;iRNA_PseU:0 8807 chr12 72091126 72091126 1 + A G UCEC 72091125 + 72091105 72091145 41 CCACAGAACTGGCCCTGCTGTACATGATAGAAAATGGCCCC CCACAGAACTGGCCCTGCTGTGCATGATAGAAAATGGCCCC < 41bp 0.861528008186406 0.473281271974848 0.76739955 0.302155 prediction 0.723056016372811 Functional Loss - TMEM19 ENSG00000139291 CDS Human protein_coding chr12:72091125 chr12:72091126 nonsynonymous SNV 0.968 4 22 hPsi_associated_SNPs_3390 0 0 0 0 1 Endoplasmic reticulum 0.438718592711433 0.438718592997212 0.5347991 0 hPsi_site_8807 iPseU_CNN:0.5347991;iRNA_PseU:0 8808 chr11 107501177 107501177 1 + A G READ 107501176 + 107501156 107501196 41 GTATGCCTGTATTTTTACTGTAAATTTCTGTGGCGCTGCCT GTATGCCTGTATTTTTACTGTGAATTTCTGTGGCGCTGCCT < 41bp 0.861519683358005 0.494304779000783 0.27132213 0.2275495 prediction 0.72303936671601 Functional Loss - ELMOD1 ENSG00000110675 CDS Human protein_coding chr11:107501176 chr11:107501177 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_3391 0 0 1 0 1 exosome 0.438877825808234 0.43870615366139 0 0 hPsi_site_8808 iPseU_CNN:0;iRNA_PseU:0 8809 chr3 160952598 160952598 1 + A G LUSC 160952597 + 160952577 160952617 41 GTGTGGAGATTGCCATAGAGTAGAAGCTAAGGATTTCTGGA GTGTGGAGATTGCCATAGAGTGGAAGCTAAGGATTTCTGGA < 41bp 0.867930621177954 0.506423785149412 0.27289504 0.2190659 prediction 0.723013672057083 Functional Loss - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160952597 chr3:160952598 synonymous SNV . 0 22 hPsi_associated_SNPs_3392 0 0 1 0 2 Nucleus 0.438718486362749 0.438718674080398 0 0 hPsi_site_8809 iPseU_CNN:0;iRNA_PseU:0 8810 chr15 22743148 22743148 1 + A G rs554674827 22743147 + 22743127 22743167 41 GCACGACCAGGAGGAGAAGATACGGGAGCAGGAGGAGAAGA GCACGACCAGGAGGAGAAGATGCGGGAGCAGGAGGAGAAGA < 41bp 0.869247716210229 0.507795452318022 0.5683936 0.2273475 prediction 0.722904527784413 Functional Loss - GOLGA6L1;GOLGA6L22 ENSG00000197414 CDS Human other chr15:22743147 chr15:22743148 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3393 0 0 0 0 0 unknown 0.438718592994978 0.438718592994999 0.1367872 0 hPsi_site_8810 iPseU_CNN:0.1367872;iRNA_PseU:0 8811 chr4 1019044 1019044 1 + A G LUSC 1019043 + 1019023 1019063 41 CTAAGTTGTACCCCAAACTCTACACAGACATCCACACACAC CTAAGTTGTACCCCAAACTCTGCACAGACATCCACACACAC < 41bp 0.873929887328515 0.512479926828115 0.5225607 0.26411623 prediction 0.722899921000799 Functional Loss - FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1019043 chr4:1019044 nonsynonymous SNV 0.926 4 22 hPsi_associated_SNPs_3394 0 0 1 0 0 Ribosome 0.438404312223388 0.438718467574457 0.0451214 0 hPsi_site_8811 iPseU_CNN:0.0451214;iRNA_PseU:0 8812 chr11 34107731 34107731 1 + A G ESCA 34107730 + 34107710 34107750 41 AGACAGCGAGTACAAGACCTTATGGCACAAATGCAGGGTCC AGACAGCGAGTACAAGACCTTGTGGCACAAATGCAGGGTCC < 41bp 0.861418696298521 0.479329101079483 0.3993946 0.28653622 prediction 0.722837392597043 Functional Loss - CAPRIN1 ENSG00000135387 CDS Human protein_coding chr11:34107730 chr11:34107731 nonsynonymous SNV 0.975 2 22 hPsi_associated_SNPs_3395 0 0 1 0 1 Cytosol 0.438775491802103 0.438981451029683 0 0 hPsi_site_8812 iPseU_CNN:0;iRNA_PseU:0 8813 chr11 85979560 85979560 1 + A G THYM 85979559 + 85979539 85979579 41 CCAGAGACATACATAGGAATTATGTTGATTGTGTGCGATGG CCAGAGACATACATAGGAATTGTGTTGATTGTGTGCGATGG < 41bp 0.866835081564866 0.505424217700371 0.38572106 0.27448255 prediction 0.722821727728989 Functional Loss - EED ENSG00000074266 CDS Human protein_coding chr11:85979559 chr11:85979560 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3396 0 0 1 0 2 Ribosome 0.441820188635342 0.443318964431677 0 0 hPsi_site_8813 iPseU_CNN:0;iRNA_PseU:0 8814 chr3 101477207 101477207 1 + A G STAD 101477206 + 101477186 101477226 41 CTCAAGCCAAAGATGTGCGTTACGAAATCCGGCTACGCAGA CTCAAGCCAAAGATGTGCGTTGCGAAATCCGGCTACGCAGA < 41bp 0.870744277099994 0.509357429560044 0.80901027 0.6472563 prediction 0.7227736950799 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101477206 chr3:101477207 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_3397 0 0 1 0 1 Cytosol 0.438718556766254 0.438715597274684 0.32350794 0 hPsi_site_8814 iPseU_CNN:0.32350794;iRNA_PseU:0 8815 chr15 99796228 99796228 1 + A G UCEC 99796227 + 99796207 99796247 41 AAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACC AAAGCACAAGAATTTGTTCTTGAATTATAGGAATCTGCACC < 41bp 0.869825962287791 0.508467432511839 0.40959966 0.28180382 prediction 0.722717059551904 Functional Loss - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99796227 chr15:99796228 synonymous SNV . 0 22 hPsi_associated_SNPs_3398 0 0 0 3 0 Cytosol 0.438718564831544 0.438719347063187 0 0 hPsi_site_8815 iPseU_CNN:0;iRNA_PseU:0 8816 chr4 27024273 27024273 1 + A G rs373466728 27024272 + 27024252 27024292 41 ATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGG ATCAAGAGATGAGGTGTCCCTGGAGGATTCCTCCCGAGGGG < 41bp 0.863043323833657 0.501730075956122 0.31326807 0.21581623 prediction 0.722626495755072 Functional Loss - STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024272 chr4:27024273 synonymous SNV . 0 22 hPsi_associated_SNPs_3399 0 0 0 0 0 Nucleus 0.438718592985724 0.438718592995102 0 0 hPsi_site_8816 iPseU_CNN:0;iRNA_PseU:0 8817 chr1 37947355 37947355 1 + A G COAD 37947354 + 37947334 37947374 41 TCGTGGTTTCCAACGACACATACCGTGACCTCCAAGGCGAG TCGTGGTTTCCAACGACACATGCCGTGACCTCCAAGGCGAG < 41bp 0.861264933686938 0.476388614405664 0.29341334 0.1653443 prediction 0.722529867373876 Functional Loss - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37947354 chr1:37947355 nonsynonymous SNV 0.840 4 22 hPsi_associated_SNPs_3400 0 0 0 0 1 Nucleus 0.439218118847658 0.439185137652167 0 0 hPsi_site_8817 iPseU_CNN:0;iRNA_PseU:0 8818 chr5 148206948 148206948 1 + A G LIHC 148206947 + 148206927 148206967 41 ACCAGGAAGCCATCAACTGCTATGCCAATGAGACCTGCTGT ACCAGGAAGCCATCAACTGCTGTGCCAATGAGACCTGCTGT < 41bp 0.872141487900158 0.51088726869791 0.2762434 0.25531083 prediction 0.722508438404496 Functional Loss - ADRB2 ENSG00000169252 CDS Human protein_coding chr5:148206947 chr5:148206948 nonsynonymous SNV 0.734 3 22 hPsi_associated_SNPs_3401 0 0 0 0 0 Cytoplasm 0.439961866768448 0.438742277290659 0 0 hPsi_site_8818 iPseU_CNN:0;iRNA_PseU:0 8819 chr1 109273479 109273479 1 + A G STAD 109273478 + 109273458 109273498 41 GCATCACATGTGGCATCAATTACACAGTGACATTAAAAGCA GCATCACATGTGGCATCAATTGCACAGTGACATTAAAAGCA < 41bp 0.871389229391545 0.510139922585478 0.20225438 0.12482214 prediction 0.722498613612134 Functional Loss - FNDC7 ENSG00000143107 CDS Human protein_coding chr1:109273478 chr1:109273479 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3402 0 0 0 0 1 exosome 0.438769456695745 0.437724487931055 0 0 hPsi_site_8819 iPseU_CNN:0;iRNA_PseU:0 8820 chr14 55529678 55529678 1 + A G UCEC 55529677 + 55529657 55529697 41 GGGCCATATCCTACACCAAATATGCCCTTTCCAGAGCTACC GGGCCATATCCTACACCAAATGTGCCCTTTCCAGAGCTACC < 41bp 0.861233664289597 0.478192483683438 0.4358303 0.29055357 prediction 0.722467328579194 Functional Loss - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529677 chr14:55529678 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3403 0 0 1 0 0 Ribosome 0.438726905420966 0.438722748117179 0 0 hPsi_site_8820 iPseU_CNN:0;iRNA_PseU:0 8821 chr1 232942153 232942153 1 + A G THCA 232942152 + 232942132 232942172 41 AAACCGCCCCCTGCACAGGCTAAAATCACCATTGAGCCTCA AAACCGCCCCCTGCACAGGCTGAAATCACCATTGAGCCTCA < 41bp 0.861218841681668 0.494365160501512 0.48498982 0.2885077 prediction 0.722437683363336 Functional Loss - MAP10 ENSG00000212916 CDS Human protein_coding chr1:232942152 chr1:232942153 nonsynonymous SNV 0.114 0 22 hPsi_associated_SNPs_3404 0 0 0 0 0 exosome 0.438772301833171 0.438856057258812 0 0 hPsi_site_8821 iPseU_CNN:0;iRNA_PseU:0 8822 chr1 84662349 84662349 1 + A G UCEC 84662348 + 84662328 84662368 41 AGATAGTGCTAACATTCGAGTACCTCCATTCACTAGACCTC AGATAGTGCTAACATTCGAGTGCCTCCATTCACTAGACCTC < 41bp 0.864584649792029 0.503412856871718 0.4303416 0.1681912 prediction 0.722343585840622 Functional Loss - PRKACB ENSG00000142875 CDS Human protein_coding chr1:84662348 chr1:84662349 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3405 0 0 1 0 2 cytosol 0.438722005178336 0.438718594113366 0 0 hPsi_site_8822 iPseU_CNN:0;iRNA_PseU:0 8823 chr19 48255839 48255839 1 + A G UCEC 48255838 + 48255818 48255858 41 TGGCGCCTGCCGGAGCTTCCTACAATCCATCCTTTGAAGAC TGGCGCCTGCCGGAGCTTCCTGCAATCCATCCTTTGAAGAC < 41bp 0.882228261562789 0.521057999124561 0.8146146 0.44274718 prediction 0.722340524876456 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48255838 chr19:48255839 nonsynonymous SNV 0.696 5 22 hPsi_associated_SNPs_3406 0 0 1 0 2 unknown 0.438721746224852 0.438719349966618 0.6292292 0 hPsi_site_8823 iPseU_CNN:0.6292292;iRNA_PseU:0 8824 chr12 120110160 120110160 1 + A G COAD 120110159 + 120110139 120110179 41 CATGATCTGGAAGTGAATGATAAAGCTCCCGCCCAGGCTCG CATGATCTGGAAGTGAATGATGAAGCTCCCGCCCAGGCTCG < 41bp 0.861169557110192 0.477146043391058 0.5710936 0.30315554 prediction 0.722339114220384 Functional Loss - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120110159 chr12:120110160 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3407 0 0 1 0 1 Ribosome 0.438718488395952 0.438716130613849 0.1421872 0 hPsi_site_8824 iPseU_CNN:0.1421872;iRNA_PseU:0 8825 chr10 135027554 135027554 1 + A G UCEC 135027553 + 135027533 135027573 41 CGTTCAGGACAAGTATCTGTTACAGCTTCTAAGAAACGCAG CGTTCAGGACAAGTATCTGTTGCAGCTTCTAAGAAACGCAG < 41bp 0.861153609822856 0.48093741449924 0.77610826 0.3906807 prediction 0.722307219645712 Functional Loss - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135027553 chr10:135027554 synonymous SNV . 0 22 hPsi_associated_SNPs_3408 0 0 0 0 2 Endoplasmic reticulum 0.438718501597047 0.438718598732186 0.55221652 0 hPsi_site_8825 iPseU_CNN:0.55221652;iRNA_PseU:0 8826 chr6 116949288 116949288 1 + A G UCEC 116949287 + 116949267 116949307 41 TGGATGCTCCCATCATAAGCTACCCACCTTTCCCAGGAAAT TGGATGCTCCCATCATAAGCTGCCCACCTTTCCCAGGAAAT < 41bp 0.861142489230175 0.481975789974878 0.34981257 0.17848665 prediction 0.72228497846035 Functional Loss - RSPH4A ENSG00000111834 CDS Human protein_coding chr6:116949287 chr6:116949288 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_3409 0 0 0 0 0 exosome 0.438717340259325 0.43871870184579 0 0 hPsi_site_8826 iPseU_CNN:0;iRNA_PseU:0 8827 chr19 6926543 6926543 1 + A G UCEC 6926542 + 6926522 6926562 41 TGCACATCTGTGCCTTTGGTTATGGGCTGCCGATGCTGGTG TGCACATCTGTGCCTTTGGTTGTGGGCTGCCGATGCTGGTG < 41bp 0.861129448387349 0.467051740260809 0.5061174 0.27116227 prediction 0.722258896774698 Functional Loss - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6926542 chr19:6926543 nonsynonymous SNV 0.318 3 22 hPsi_associated_SNPs_3410 0 0 0 0 1 exosome 0.433155038293833 0.438394610480538 0.0122348000000001 0 hPsi_site_8827 iPseU_CNN:0.0122348000000001;iRNA_PseU:0 8828 chr1 150531813 150531813 1 + A G UCEC 150531812 + 150531792 150531832 41 GCGTAGAGACATCATCTGTGTATCCAAACTGGGGACGGAGT GCGTAGAGACATCATCTGTGTGTCCAAACTGGGGACGGAGT < 41bp 0.861125428484906 0.470253826594814 0.3222177 0.27486545 prediction 0.722250856969812 Functional Loss - ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150531812 chr1:150531813 synonymous SNV . 0 22 hPsi_associated_SNPs_3411 0 0 0 0 1 Endoplasmic reticulum 0.438363413519838 0.438892547048992 0 0 hPsi_site_8828 iPseU_CNN:0;iRNA_PseU:0 8829 chr16 14738316 14738316 1 + A G rs79546825 14738315 + 14738295 14738335 41 AATTTTCTTGCCACTGCTGCTACGACATCCTGGTTAACCCC AATTTTCTTGCCACTGCTGCTGCGACATCCTGGTTAACCCC < 41bp 0.861103524372539 0.478537026524941 0.42594028 0.20098385 prediction 0.722207048745078 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14738315 chr16:14738316 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_3412 0 0 1 0 0 Ribosome 0.438804930904768 0.438683317479018 0 0 hPsi_site_8829 iPseU_CNN:0;iRNA_PseU:0 8830 chr17 6684071 6684071 1 + A G PRAD 6684070 + 6684050 6684090 41 TCTTTGAACGGATCATGAAGTACGAACGCTTGGCCCGAATC TCTTTGAACGGATCATGAAGTGCGAACGCTTGGCCCGAATC < 41bp 0.87269064393192 0.511679420623952 0.71711296 0.5105173 prediction 0.722022446615935 Functional Loss - FBXO39 ENSG00000177294 CDS Human protein_coding chr17:6684070 chr17:6684071 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_3413 0 0 0 0 0 exosome 0.438718783447161 0.438707953318478 0.41319132 0 hPsi_site_8830 iPseU_CNN:0.41319132;iRNA_PseU:0 8831 chr15 78454655 78454655 1 + A G COAD 78454654 + 78454634 78454674 41 TTGCTGAGTTTGCCTTTGAGTATGCCCGGAACAACCACCGG TTGCTGAGTTTGCCTTTGAGTGTGCCCGGAACAACCACCGG < 41bp 0.884347629154577 0.523450117066088 0.6845288 0.27513006 prediction 0.721795024176979 Functional Loss - IDH3A ENSG00000166411 CDS Human protein_coding chr15:78454654 chr15:78454655 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_3414 0 0 1 0 2 Cytosol 0.438718593033473 0.438718593014959 0.3690576 0 hPsi_site_8831 iPseU_CNN:0.3690576;iRNA_PseU:0 8832 chr9 133748276 133748276 1 + A G HNSC 133748275 + 133748255 133748295 41 ACCCGGGAGCCCCCGTTCTATATCATCACTGAGTTCATGAC ACCCGGGAGCCCCCGTTCTATGTCATCACTGAGTTCATGAC < 41bp 0.860879635567376 0.466055022554939 0.42372644 0.2939153 prediction 0.721759271134752 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133748275 chr9:133748276 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_3415 0 0 1 0 1 Endoplasmic reticulum 0.43872050847258 0.438831105116005 0 0 hPsi_site_8832 iPseU_CNN:0;iRNA_PseU:0 8833 chr2 62228088 62228088 1 + A G LUSC 62228087 + 62228067 62228107 41 ATACACACACCTGTTGCCATTATAGAGCTGGAATTAGGCAA ATACACACACCTGTTGCCATTGTAGAGCTGGAATTAGGCAA < 41bp 0.860825385569396 0.488815510875606 0.2742184 0.3171634 prediction 0.721650771138792 Functional Loss - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62228087 chr2:62228088 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_3416 0 0 1 0 1 Cytosol 0.438713493181457 0.438716714601576 0 0 hPsi_site_8833 iPseU_CNN:0;iRNA_PseU:0 8834 chr16 54966579 54966579 1 + A G UCEC 54966578 + 54966558 54966598 41 ACGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAG ACGAGCACCGCAAGAACCCCTGCCCCACCAAGGGCGAGAAG < 41bp 0.875769792516745 0.514945993150054 0.32231796 0.22757041 prediction 0.721647598733381 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54966578 chr16:54966579 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3417 0 0 0 0 0 exosome 0.438723220619942 0.438723090458129 0 0 hPsi_site_8834 iPseU_CNN:0;iRNA_PseU:0 8835 chr1 32751301 32751301 1 + A G UCEC 32751300 + 32751280 32751320 41 TCACGGCCACAGAGGGCCAGTACCAGCCTCAGCCTTGAGAG TCACGGCCACAGAGGGCCAGTGCCAGCCTCAGCCTTGAGAG < 41bp 0.860801835769306 0.484472925888535 0.64381534 0.3324606 prediction 0.721603671538613 Functional Loss - LCK ENSG00000182866 CDS Human protein_coding chr1:32751300 chr1:32751301 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3418 0 0 0 0 0 Cytosol 0.438718594543375 0.438718592951131 0.28763068 0 hPsi_site_8835 iPseU_CNN:0.28763068;iRNA_PseU:0 8836 chr1 27627827 27627827 1 + A G STAD 27627826 + 27627806 27627846 41 GCTGCCTCTTTGAGCTCAAGTATGTGGCTGAAGCCCTGGAG GCTGCCTCTTTGAGCTCAAGTGTGTGGCTGAAGCCCTGGAG < 41bp 0.860792195784843 0.468142645150557 0.5741382 0.3980127 prediction 0.721584391569686 Functional Loss - WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27627826 chr1:27627827 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3419 0 0 1 0 0 Cytosol 0.438736606044311 0.438724475169483 0.1482764 0 hPsi_site_8836 iPseU_CNN:0.1482764;iRNA_PseU:0 8837 chr7 76924053 76924053 1 + A G LIHC 76924052 + 76924032 76924072 41 CAGAGCAGCGTCCGAATGCCTACATCCCAGAAGCAGATGCC CAGAGCAGCGTCCGAATGCCTGCATCCCAGAAGCAGATGCC < 41bp 0.875923162108134 0.515165770501614 0.6606727 0.2842707 prediction 0.721514783213041 Functional Loss - CCDC146 ENSG00000135205 CDS Human protein_coding chr7:76924052 chr7:76924053 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3420 0 0 0 0 1 exosome 0.438716066182276 0.438717183104998 0.3213454 0 hPsi_site_8837 iPseU_CNN:0.3213454;iRNA_PseU:0 8838 chr19 1979554 1979554 1 + A G LGG 1979553 + 1979533 1979573 41 ACTTCTTCGAGAAGCCCGACTATGACTACCTGCGGAAGCTC ACTTCTTCGAGAAGCCCGACTGTGACTACCTGCGGAAGCTC < 41bp 0.860740754629725 0.474446130812117 0.9013647 0.579503 prediction 0.721481509259449 Functional Loss - CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1979553 chr19:1979554 nonsynonymous SNV 0.929 4 22 hPsi_associated_SNPs_3421 0 0 1 0 2 Ribosome 0.438720487929917 0.438717687870764 0.6437234 0 hPsi_site_8838 iPseU_CNN:0.6437234;iRNA_PseU:0 8839 chr1 156756616 156756616 1 + A G BLCA 156756615 + 156756595 156756635 41 ACCACTCCGTCGCCCTCTGCTATCAAGGCTGCTGCCAAGAG ACCACTCCGTCGCCCTCTGCTGTCAAGGCTGCTGCCAAGAG < 41bp 0.884830720013214 0.524107655415351 0.5820404 0.2660684 prediction 0.721446129195724 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156756615 chr1:156756616 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_3422 0 0 1 0 0 Ribosome 0.438764346310058 0.438851691197297 0.1640808 0 hPsi_site_8839 iPseU_CNN:0.1640808;iRNA_PseU:0 8840 chr7 128454911 128454911 1 + A G UCEC 128454910 + 128454890 128454930 41 AACAAGAATGCCAATGGGGTTAAAATGAAAAAGGTGACCAA AACAAGAATGCCAATGGGGTTGAAATGAAAAAGGTGACCAA < 41bp 0.860700372599487 0.488561405746271 0.5005135 0.25436568 prediction 0.721400745198974 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128454910 chr7:128454911 nonsynonymous SNV 0.565 1 22 hPsi_associated_SNPs_3423 0 0 1 0 1 chromatin 0.438718592996071 0.438718970554378 0.00102699999999989 0 hPsi_site_8840 iPseU_CNN:0.00102699999999989;iRNA_PseU:0 8841 chr17 33323650 33323650 1 + A G COAD 33323649 + 33323629 33323669 41 GTTTTTGATTGTATCTACTTTAATGATGTCAGCTTGATGGA GTTTTTGATTGTATCTACTTTGATGATGTCAGCTTGATGGA < 41bp 0.860655414021901 0.475034234547761 0.36119595 0.30061406 prediction 0.721310828043802 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33323649 chr17:33323650 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_3424 0 0 1 0 2 Cytosol 0.438742453115226 0.439874672052396 0 0 hPsi_site_8841 iPseU_CNN:0;iRNA_PseU:0 8842 chr20 60699742 60699742 1 + A G STAD 60699741 + 60699721 60699761 41 CCAGAGAGGAGATTTATGAGTACATCATTTTCCGAGGAAGT CCAGAGAGGAGATTTATGAGTGCATCATTTTCCGAGGAAGT < 41bp 0.860629713371844 0.499424551643115 0.748414 0.35478744 prediction 0.721259426743688 Functional Loss - LSM14B ENSG00000149657 CDS Human protein_coding chr20:60699741 chr20:60699742 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3425 0 0 1 0 1 Ribosome 0.438718592896707 0.438718463825758 0.496828 0 hPsi_site_8842 iPseU_CNN:0.496828;iRNA_PseU:0 8843 chr15 82564060 82564060 1 + A G rs149445041 82564059 + 82564039 82564079 41 ACAAACGGGATTTGAATTCGTATAAAGTGCAGCCTGTGGCA ACAAACGGGATTTGAATTCGTGTAAAGTGCAGCCTGTGGCA < 41bp 0.860619357393275 0.493027867896218 0.60056067 0.29847753 prediction 0.72123871478655 Functional Loss - SAXO2 ENSG00000188659 CDS Human protein_coding chr15:82564059 chr15:82564060 nonsynonymous SNV 0.423 2 22 hPsi_associated_SNPs_3426 0 0 0 0 1 nucleus 0.439256759038403 0.484753911449117 0.20112134 0 hPsi_site_8843 iPseU_CNN:0.20112134;iRNA_PseU:0 8844 chr19 11464246 11464246 1 + A G LUSC 11464245 + 11464225 11464265 41 CCAGAAGGAACTGAGTGATATATGGTGATGCCCAGCCTGCA CCAGAAGGAACTGAGTGATATGTGGTGATGCCCAGCCTGCA < 41bp 0.865936308457524 0.505327548282314 0.44616044 0.46012834 prediction 0.72121752035042 Functional Loss - CCDC159 ENSG00000183401 CDS Human protein_coding chr19:11464245 chr19:11464246 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3427 0 0 1 0 1 exosome 0.438718606792445 0.438719515799145 0 0 hPsi_site_8844 iPseU_CNN:0;iRNA_PseU:0 8845 chr7 931927 931927 1 + A G SKCM 931926 + 931906 931946 41 CATTTCCAGGTTTCTCTGTTTAAAAAACAAAAGTAGCGCAT CATTTCCAGGTTTCTCTGTTTGAAAAACAAAAGTAGCGCAT < 41bp 0.870640563922471 0.510051858326772 0.5914148 0.34792972 prediction 0.721177411191397 Functional Loss - GET4 ENSG00000239857 CDS Human protein_coding chr7:931926 chr7:931927 synonymous SNV . 0 22 hPsi_associated_SNPs_3428 0 0 0 0 1 Cytosol 0.466086367064089 0.440832819161416 0.1828296 0 hPsi_site_8845 iPseU_CNN:0.1828296;iRNA_PseU:0 8846 chr7 30649281 30649281 1 + A G BRCA 30649280 + 30649260 30649300 41 TCCCATTACTGGAAATGATCTATCCCCTCCAGTGTCTTTTA TCCCATTACTGGAAATGATCTGTCCCCTCCAGTGTCTTTTA < 41bp 0.860585951595559 0.486568071615539 0.5999382 0.55265456 prediction 0.721171903191117 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30649280 chr7:30649281 synonymous SNV . 0 22 hPsi_associated_SNPs_3429 1 0 1 0 2 Cytosol 0.438717885302452 0.438718483969556 0.0945672799999999 0 hPsi_site_8846 iPseU_CNN:0.0945672799999999;iRNA_PseU:0 8847 chr4 187084671 187084671 1 + A G UCEC 187084670 + 187084650 187084690 41 GGCCTCAGACACTCATGGATTATCACCTTCTGCAAAGAAAA GGCCTCAGACACTCATGGATTGTCACCTTCTGCAAAGAAAA < 41bp 0.860544479032665 0.474765304101244 0.74493325 0.6711318 prediction 0.721088958065329 Functional Loss - FAM149A ENSG00000109794 CDS Human protein_coding chr4:187084670 chr4:187084671 synonymous SNV . 0 22 hPsi_associated_SNPs_3430 0 0 0 0 1 Cytosol 0.438718591074895 0.438718579608454 0.1476029 0 hPsi_site_8847 iPseU_CNN:0.1476029;iRNA_PseU:0 8848 chr12 8205541 8205541 1 + A G rs756091630 8205540 + 8205520 8205560 41 CCGTCCCTTCCCCCCGTCTGTATATAGACATATATCCTCTT CCGTCCCTTCCCCCCGTCTGTGTATAGACATATATCCTCTT < 41bp 0.860538975832025 0.493259231835508 0.30754095 0.2468375 prediction 0.72107795166405 Functional Loss - FOXJ2 ENSG00000065970 UTR3 Human protein_coding chr12:8205540 chr12:8205541 . . 0 22 hPsi_associated_SNPs_3431 0 0 1 0 0 nucleoplasm 0.431935232406158 0.41933794975735 0 0 hPsi_site_8848 iPseU_CNN:0;iRNA_PseU:0 8849 chrX 70346886 70346886 1 + A G COAD 70346885 + 70346865 70346905 41 CCTCGGATCTGGTGGGCAGCTACACTACTAGCCTGTGCCTG CCTCGGATCTGGTGGGCAGCTGCACTACTAGCCTGTGCCTG < 41bp 0.860526410864753 0.477131403625241 0.65449893 0.36416775 prediction 0.721052821729506 Functional Loss - MED12 ENSG00000184634 CDS Human protein_coding chrX:70346885 chrX:70346886 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_3432 0 0 0 0 2 Cytosol 0.438717739751105 0.438717321971184 0.30899786 0 hPsi_site_8849 iPseU_CNN:0.30899786;iRNA_PseU:0 8850 chr16 75033859 75033859 1 + A G UCEC 75033858 + 75033838 75033878 41 GGTCTGCGTCCGACTCCACCTATGCCCATGGCAATGGTTAC GGTCTGCGTCCGACTCCACCTGTGCCCATGGCAATGGTTAC < 41bp 0.860499177855612 0.496311238013644 0.66212285 0.4000339 prediction 0.720998355711224 Functional Loss - ZNRF1 ENSG00000186187 CDS Human protein_coding chr16:75033858 chr16:75033859 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3433 0 0 0 0 0 Ribosome 0.444513458803356 0.439919290570143 0.3242457 0 hPsi_site_8850 iPseU_CNN:0.3242457;iRNA_PseU:0 8851 chr12 129410966 129410966 1 + A G UCEC 129410965 + 129410945 129410985 41 ATATGTGGACTTCGACAAGTTAAGGATCCTCTCTATCTGGT ATATGTGGACTTCGACAAGTTGAGGATCCTCTCTATCTGGT < 41bp 0.882895285121191 0.522411070809717 0.83233196 0.42037374 prediction 0.720968428622947 Functional Loss - GLT1D1 ENSG00000151948 CDS Human protein_coding chr12:129410965 chr12:129410966 nonsynonymous SNV 0.037 4 22 hPsi_associated_SNPs_3434 0 0 0 0 2 Cytosol 0.438755620452077 0.438719842570653 0.66466392 0 hPsi_site_8851 iPseU_CNN:0.66466392;iRNA_PseU:0 8852 chr2 219449373 219449373 1 + A G COAD 219449372 + 219449352 219449392 41 CACACATCCCACTTTTTTTGTACCCCTTTTTGCACACTGTC CACACATCCCACTTTTTTTGTGCCCCTTTTTGCACACTGTC < 41bp 0.860482366034326 0.472996421985217 0.40129238 0.28652394 prediction 0.720964732068651 Functional Loss - CNOT9 ENSG00000144580 CDS Human protein_coding chr2:219449372 chr2:219449373 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3435 0 0 1 0 2 Cytosol 0.438719084680822 0.438718560099749 0 0 hPsi_site_8852 iPseU_CNN:0;iRNA_PseU:0 8853 chr9 35295774 35295774 1 + A G UCEC 35295773 + 35295753 35295793 41 GCAACAGCTTCCCACCTCCTTACCATACAGCTTCCCAGCCC GCAACAGCTTCCCACCTCCTTGCCATACAGCTTCCCAGCCC < 41bp 0.88096378689417 0.520490871520563 0.76576823 0.3390293 prediction 0.720945830747215 Functional Loss - UNC13B ENSG00000198722 CDS Human protein_coding chr9:35295773 chr9:35295774 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3436 0 0 0 0 1 Cytosol 0.438718592994624 0.438718592994144 0.53153646 0 hPsi_site_8853 iPseU_CNN:0.53153646;iRNA_PseU:0 8854 chr19 50549893 50549893 1 + A G COAD 50549892 + 50549872 50549912 41 CTCAGGTGAGAAGCCCTATGTATGTGATTACTGCGGGAAGG CTCAGGTGAGAAGCCCTATGTGTGTGATTACTGCGGGAAGG < 41bp 0.860431261234355 0.490934607505087 0.3357467 0.27226067 prediction 0.720862522468709 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549892 chr19:50549893 synonymous SNV . 0 22 hPsi_associated_SNPs_3437 0 0 1 0 0 Cytosol 0.43871859299728 0.438718592995227 0 0 hPsi_site_8854 iPseU_CNN:0;iRNA_PseU:0 8855 chr5 115249091 115249091 1 + A G COAD 115249090 + 115249070 115249110 41 AGGAGCTCCAGCCCGTGCTGTATCAGCTGTAAAGAATATGA AGGAGCTCCAGCCCGTGCTGTGTCAGCTGTAAAGAATATGA < 41bp 0.860409457884096 0.499816500198612 0.32415122 0.21506205 prediction 0.720818915768192 Functional Loss - AP3S1 ENSG00000177879 CDS Human protein_coding chr5:115249090 chr5:115249091 synonymous SNV . 0 22 hPsi_associated_SNPs_3438 0 0 1 0 1 Ribosome 0.439479417862515 0.441738374373181 0 0 hPsi_site_8855 iPseU_CNN:0;iRNA_PseU:0 8856 chr5 180377066 180377066 1 + A G rs188974899 180377065 + 180377045 180377085 41 GTTTCCAAGCAGGGAAACATTACTGGGAGGTGGACGGAGGA GTTTCCAAGCAGGGAAACATTGCTGGGAGGTGGACGGAGGA < 41bp 0.860393795054574 0.488616674954229 0.38435504 0.25182486 prediction 0.720787590109147 Functional Loss - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180377065 chr5:180377066 nonsynonymous SNV 0.244 3 22 hPsi_associated_SNPs_3439 0 0 0 0 0 chromatin 0.43871860870932 0.438718593662904 0 0 hPsi_site_8856 iPseU_CNN:0;iRNA_PseU:0 8857 chr11 65562616 65562616 1 + A G UCEC 65562615 + 65562595 65562635 41 TCCATGGTGTGCAGCAGAAGTACGCGTACAAGGAGCGGCGG TCCATGGTGTGCAGCAGAAGTGCGCGTACAAGGAGCGGCGG < 41bp 0.860357177059613 0.483010143439594 0.47577623 0.14757904 prediction 0.720714354119226 Functional Loss - OVOL1 ENSG00000172818 CDS Human protein_coding chr11:65562615 chr11:65562616 nonsynonymous SNV 0.658 4 22 hPsi_associated_SNPs_3440 0 0 0 0 1 exosome 0.438735356736841 0.438717692181377 0 0 hPsi_site_8857 iPseU_CNN:0;iRNA_PseU:0 8858 chr19 39914165 39914165 1 + A G UCEC 39914164 + 39914144 39914184 41 TGCGAGAGCTGGCCCGGCTTTACAGCGAGCGGATCCAGCAG TGCGAGAGCTGGCCCGGCTTTGCAGCGAGCGGATCCAGCAG < 41bp 0.880969872125796 0.52071372683584 0.6790026 0.24632639 prediction 0.720512290579912 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39914164 chr19:39914165 nonsynonymous SNV 0.963 3 22 hPsi_associated_SNPs_3441 0 0 1 0 0 Nucleus 0.43871859247533 0.438722197112833 0.3580052 0 hPsi_site_8858 iPseU_CNN:0.3580052;iRNA_PseU:0 8859 chr6 138200423 138200423 1 + A G HNSC 138200422 + 138200402 138200442 41 GCAGAAAAGCCGGCTGCGTGTATTTTGGGACTCCAGAAAAC GCAGAAAAGCCGGCTGCGTGTGTTTTGGGACTCCAGAAAAC < 41bp 0.860218063783643 0.48326416745411 0.50871587 0.34493744 prediction 0.720436127567287 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138200422 chr6:138200423 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3442 0 0 1 0 0 Cytosol 0.438615760697264 0.438159282913162 0.0174317399999999 0 hPsi_site_8859 iPseU_CNN:0.0174317399999999;iRNA_PseU:0 8860 chrX 149831932 149831932 1 + A G LIHC 149831931 + 149831911 149831951 41 TACAGAAAGGACTGTTTCTTTATGGTCACTGATAAACAGTA TACAGAAAGGACTGTTTCTTTGTGGTCACTGATAAACAGTA < 41bp 0.862979736490131 0.502789789797269 0.27083424 0.22100183 prediction 0.720379893385725 Functional Loss - MTM1 ENSG00000171100 CDS Human protein_coding chrX:149831931 chrX:149831932 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_3443 0 0 0 0 2 Ribosome 0.438718900397205 0.438784575210061 0 0 hPsi_site_8860 iPseU_CNN:0;iRNA_PseU:0 8861 chr14 86088921 86088921 1 + A G LUSC 86088920 + 86088900 86088940 41 ATGGCCGTCAGGGAATTAAATATGAATCTTTTGTCCTGTCC ATGGCCGTCAGGGAATTAAATGTGAATCTTTTGTCCTGTCC < 41bp 0.8601208943281 0.485698561137478 0.41529617 0.42934597 prediction 0.7202417886562 Functional Loss - FLRT2 ENSG00000185070 CDS Human protein_coding chr14:86088920 chr14:86088921 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3444 0 0 0 0 0 Ribosome 0.438661576555729 0.438713264282567 0 0 hPsi_site_8861 iPseU_CNN:0;iRNA_PseU:0 8862 chr22 37708077 37708077 1 + A G UCEC 37708076 + 37708056 37708096 41 CACAGTTCTGCCTGGAGCTCTACAACCCTAGCTGCCGAGGC CACAGTTCTGCCTGGAGCTCTGCAACCCTAGCTGCCGAGGC < 41bp 0.860104136685863 0.463429400108277 0.81658185 0.4372785 prediction 0.720208273371725 Functional Loss - CYTH4 ENSG00000100055 CDS Human protein_coding chr22:37708076 chr22:37708077 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3445 0 0 0 0 1 exosome 0.438604747764573 0.438624634131715 0.6331637 0 hPsi_site_8862 iPseU_CNN:0.6331637;iRNA_PseU:0 8863 chr9 125424339 125424339 1 + A G GBM 125424338 + 125424318 125424358 41 AAACACAGACAGTTACCTGCTAGCAGCCATGGCCATTGACC AAACACAGACAGTTACCTGCTGGCAGCCATGGCCATTGACC < 41bp 0.860087761201634 0.498421337137282 0.40178782 0.2619183 prediction 0.720175522403268 Functional Loss - OR1L1 ENSG00000173679 CDS Human protein_coding chr9:125424338 chr9:125424339 synonymous SNV . 0 22 hPsi_associated_SNPs_3446 0 0 0 0 0 unknown 0.441453175464484 0.438718991436769 0 0 hPsi_site_8863 iPseU_CNN:0;iRNA_PseU:0 8864 chr6 44122123 44122123 1 + A G UCEC 44122122 + 44122102 44122142 41 ATTGAGCACACGGAGACAGATACTGTGGACCCCAGAAGCAA ATTGAGCACACGGAGACAGATGCTGTGGACCCCAGAAGCAA < 41bp 0.86007391603713 0.476574919613432 0.50439173 0.2548667 prediction 0.720147832074259 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122122 chr6:44122123 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_3447 0 0 1 0 2 Ribosome 0.438834103688388 0.438715281978478 0.00878346000000008 0 hPsi_site_8864 iPseU_CNN:0.00878346000000008;iRNA_PseU:0 8865 chr5 176305516 176305516 1 + A G UCEC 176305515 + 176305495 176305535 41 TCTGGAATGGCACGCAGCGGTACTTGCACTGCACCTTCACC TCTGGAATGGCACGCAGCGGTGCTTGCACTGCACCTTCACC < 41bp 0.860041089312821 0.473147129362309 0.9577582 0.34757125 prediction 0.720082178625642 Functional Loss - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176305515 chr5:176305516 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3448 0 0 0 0 1 exosome 0.438635786703146 0.438724876221092 0.9155164 0 hPsi_site_8865 iPseU_CNN:0.9155164;iRNA_PseU:0 8866 chrX 48652420 48652420 1 + A G COAD 48652419 + 48652399 48652439 41 CCCCAGGTACTGCCCATCTCTACCAAGGCCTGGGCCCTGTG CCCCAGGTACTGCCCATCTCTGCCAAGGCCTGGGCCCTGTG < 41bp 0.860032320123731 0.484667357861306 0.35799187 0.27484712 prediction 0.720064640247461 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652419 chrX:48652420 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_3449 0 0 1 0 0 Cytosol 0.438726615901554 0.438721675275329 0 0 hPsi_site_8866 iPseU_CNN:0;iRNA_PseU:0 8867 chr17 66303755 66303755 1 + A G LIHC 66303754 + 66303734 66303774 41 CAGAAGCCAAACTTTGTGATTATTTTGGCCGATGACATGGG CAGAAGCCAAACTTTGTGATTGTTTTGGCCGATGACATGGG < 41bp 0.868548319412699 0.508544111700032 0.6751091 0.5614519 prediction 0.720008415425334 Functional Loss - ARSG ENSG00000141337 CDS Human protein_coding chr17:66303754 chr17:66303755 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_3450 0 0 1 0 1 chromatin 0.4387186480955 0.438721225845655 0.2273144 0 hPsi_site_8867 iPseU_CNN:0.2273144;iRNA_PseU:0 8868 chr11 64218339 64218339 1 + A G rs116868671 64218338 + 64218318 64218358 41 AGGCCCTGGGAAGATTCTAATATGTTGCTTGGGAGGGTTCT AGGCCCTGGGAAGATTCTAATGTGTTGCTTGGGAGGGTTCT < 41bp 0.859930700248379 0.496772483750936 0.30415142 0.3093921 prediction 0.719861400496758 Functional Loss - LOC100996455 ENSG00000181908 UTR3 Human lincRNA chr11:64218338 chr11:64218339 . . 0 22 hPsi_associated_SNPs_3451 0 0 0 0 0 unknown 0.438718693666022 0.438719299554837 0 0 hPsi_site_8868 iPseU_CNN:0;iRNA_PseU:0 8869 chr19 10753092 10753092 1 + A G UCEC 10753091 + 10753071 10753111 41 CACACGGTTTCTTCAGCGTCTATGGCATGTGTGTGGACACG CACACGGTTTCTTCAGCGTCTGTGGCATGTGTGTGGACACG < 41bp 0.859928799526647 0.468322151963399 0.29883143 0.24160269 prediction 0.719857599053293 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10753091 chr19:10753092 nonsynonymous SNV 0.782 4 22 hPsi_associated_SNPs_3452 0 0 0 0 2 Ribosome 0.436581383990986 0.437527872904844 0 0 hPsi_site_8869 iPseU_CNN:0;iRNA_PseU:0 8870 chr12 100957232 100957232 1 + A G UCEC 100957231 + 100957211 100957251 41 AGAGTAAACGACCACAAGTTTACCCCACTTCTCTGTGAAAT AGAGTAAACGACCACAAGTTTGCCCCACTTCTCTGTGAAAT < 41bp 0.859925415286437 0.49107335366626 0.638232 0.3657055 prediction 0.719850830572874 Functional Loss - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100957231 chr12:100957232 nonsynonymous SNV 0.983 3 22 hPsi_associated_SNPs_3453 0 0 1 0 0 cytosol 0.437870983643434 0.438805524176299 0.276464 0 hPsi_site_8870 iPseU_CNN:0.276464;iRNA_PseU:0 8871 chr19 50027842 50027842 1 + A G LUAD 50027841 + 50027821 50027861 41 CCTGCAGCGCCTTCTCCTTCTACCCTCCGGAGCTGCAACTT CCTGCAGCGCCTTCTCCTTCTGCCCTCCGGAGCTGCAACTT < 41bp 0.883363450528703 0.52344903772235 0.4163916 0.21801442 prediction 0.719828825612708 Functional Loss - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027841 chr19:50027842 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_3454 0 0 1 1 1 Endoplasmic reticulum 0.438718713462448 0.438721431740825 0 0 hPsi_site_8871 iPseU_CNN:0;iRNA_PseU:0 8872 chr11 113860425 113860425 1 + A G rs1176713 113860424 + 113860404 113860444 41 GCTATTCCACATTTACCTGCTAGCGGTGCTGGCCTACAGCA GCTATTCCACATTTACCTGCTGGCGGTGCTGGCCTACAGCA < 41bp 0.859912741913101 0.478344389519582 0.29191846 0.219067 prediction 0.719825483826203 Functional Loss - HTR3A ENSG00000166736 CDS Human protein_coding chr11:113860424 chr11:113860425 synonymous SNV . 0 22 hPsi_associated_SNPs_3455 0 0 0 0 0 Cytosol 0.438704037521352 0.438807243736352 0 0 hPsi_site_8872 iPseU_CNN:0;iRNA_PseU:0 8873 chr2 177036869 177036869 1 + A G SKCM 177036868 + 177036848 177036888 41 CGTCGTCGGCCAGCGTGGACTACAGTTGCGCCGCGCAGATT CGTCGTCGGCCAGCGTGGACTGCAGTTGCGCCGCGCAGATT < 41bp 0.880237315345579 0.520330231946616 0.65362275 0.33645326 prediction 0.719814166797927 Functional Loss - HOXD3 ENSG00000128652 CDS Human protein_coding chr2:177036868 chr2:177036869 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3456 0 0 0 0 0 exosome 0.438574357066059 0.438545825090832 0.3072455 0 hPsi_site_8873 iPseU_CNN:0.3072455;iRNA_PseU:0 8874 chrX 135593801 135593801 1 + A G UCEC 135593800 + 135593780 135593820 41 GAAAAGGAAGAAGAGGAGGATACATATGAAAAAGTATTTGA GAAAAGGAAGAAGAGGAGGATGCATATGAAAAAGTATTTGA < 41bp 0.859859732581646 0.495572010486644 0.5943458 0.24838623 prediction 0.719719465163292 Functional Loss - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593800 chrX:135593801 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_3457 0 0 1 0 0 Ribosome 0.438718969157039 0.438719392848361 0.1886916 0 hPsi_site_8874 iPseU_CNN:0.1886916;iRNA_PseU:0 8875 chr17 43175894 43175894 1 + A G COAD 43175893 + 43175873 43175913 41 AGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCA AGTTTACACTGCCGGGGTGGTGCTACCAAAGCCCGTTGGCA < 41bp 0.883597880842791 0.52373950814963 0.7072393 0.21244603 prediction 0.719716745386322 Functional Loss - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43175893 chr17:43175894 synonymous SNV . 0 22 hPsi_associated_SNPs_3458 0 0 1 0 1 Ribosome 0.438718592995103 0.4387185930111 0.4144786 0 hPsi_site_8875 iPseU_CNN:0.4144786;iRNA_PseU:0 8876 chr1 180243585 180243585 1 + A G OV 180243584 + 180243564 180243604 41 TGCGCATGCAGGGCAGGGAGTAAGCCAGACGCTGAGAGCCA TGCGCATGCAGGGCAGGGAGTGAGCCAGACGCTGAGAGCCA < 41bp 0.85983798929742 0.479451327164254 0.3903059 0.19349816 prediction 0.71967597859484 Functional Loss - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180243584 chr1:180243585 synonymous SNV . 0 22 hPsi_associated_SNPs_3459 0 0 0 0 0 chromatin 0.438675794075414 0.438672823957225 0 0 hPsi_site_8876 iPseU_CNN:0;iRNA_PseU:0 8877 chr5 170863191 170863191 1 + A G UCEC 170863190 + 170863170 170863210 41 GCCGTAAGCAGCTGCGGCTGTACCAGCTCTACAGCCGGACC GCCGTAAGCAGCTGCGGCTGTGCCAGCTCTACAGCCGGACC < 41bp 0.859797417749023 0.491004354912248 0.5722944 0.25045508 prediction 0.719594835498047 Functional Loss - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170863190 chr5:170863191 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3460 0 0 0 0 2 nucleolus 0.438708975489666 0.438718474047479 0.1445888 0 hPsi_site_8877 iPseU_CNN:0.1445888;iRNA_PseU:0 8878 chr12 54925981 54925981 1 + A G BLCA 54925980 + 54925960 54926000 41 TCCTCCCACTGCCCATTTCTTATGGGTCCCATTGAGTGCTT TCCTCCCACTGCCCATTTCTTGTGGGTCCCATTGAGTGCTT < 41bp 0.884714903962647 0.524985853135338 0.2507335 0.1736466 prediction 0.719458101654619 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54925980 chr12:54925981 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3461 0 0 0 0 2 Cytosol 0.438718599704041 0.438718572189974 0 0 hPsi_site_8878 iPseU_CNN:0;iRNA_PseU:0 8879 chr2 47278947 47278947 1 + A G rs143506259 47278946 + 47278926 47278966 41 GAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAA GAGGCCATGTCAGAGCTGACTGTGCCCTCTTCGGTCCTGAA < 41bp 0.85972534414076 0.478462584865416 0.6252954 0.32117933 prediction 0.719450688281519 Functional Loss - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47278946 chr2:47278947 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_3462 0 0 0 0 2 Nucleus 0.444793497297749 0.437102399812707 0.2505908 0 hPsi_site_8879 iPseU_CNN:0.2505908;iRNA_PseU:0 8880 chr2 220499200 220499200 1 + A G UCEC 220499199 + 220499179 220499219 41 CGTGCGTCTGAATGAGGCTGTACTCCTGGAGTCTGTGCTTG CGTGCGTCTGAATGAGGCTGTGCTCCTGGAGTCTGTGCTTG < 41bp 0.883215835806283 0.523498149048655 0.9203266 0.38569534 prediction 0.719435373515257 Functional Loss - SLC4A3 ENSG00000114923 CDS Human protein_coding chr2:220499199 chr2:220499200 synonymous SNV . 0 22 hPsi_associated_SNPs_3463 0 0 0 0 1 Cytosol 0.439719512873429 0.438720525653672 0.8406532 0 hPsi_site_8880 iPseU_CNN:0.8406532;iRNA_PseU:0 8881 chr4 189068070 189068070 1 + A G CESC 189068069 + 189068049 189068089 41 TGGGGGAAGCAGACAGCAGCTACCCGACAACCCGGAAAGAT TGGGGGAAGCAGACAGCAGCTGCCCGACAACCCGGAAAGAT < 41bp 0.859701180810559 0.470863275497444 0.73777163 0.29181656 prediction 0.719402361621118 Functional Loss - TRIML1 ENSG00000184108 CDS Human protein_coding chr4:189068069 chr4:189068070 synonymous SNV . 0 22 hPsi_associated_SNPs_3464 0 0 0 0 1 nucleus 0.438718592993413 0.438718593036012 0.47554326 0 hPsi_site_8881 iPseU_CNN:0.47554326;iRNA_PseU:0 8882 chr10 99509236 99509236 1 + A G KIRC 99509235 + 99509215 99509255 41 CTTCCCTGTCATCCAGGTTCTATGGGGCTCTTCTGGGCACA CTTCCCTGTCATCCAGGTTCTGTGGGGCTCTTCTGGGCACA < 41bp 0.877129185224768 0.517432130810925 0.64958376 0.48573104 prediction 0.719394108827685 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99509235 chr10:99509236 nonsynonymous SNV 0.906 4 22 hPsi_associated_SNPs_3465 0 0 1 2 1 Ribosome 0.438884397858958 0.438404578967795 0.29916752 0 hPsi_site_8882 iPseU_CNN:0.29916752;iRNA_PseU:0 8883 chr17 45993881 45993881 1 + A G UCEC 45993880 + 45993860 45993900 41 CAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACC CAATTCCCAAACCATCCAAGTGCAGCCCAATCTCACCAACC < 41bp 0.893774164529191 0.534120688079352 0.73548234 0.5030096 prediction 0.719306952899678 Functional Loss - SP2 ENSG00000167182 CDS Human protein_coding chr17:45993880 chr17:45993881 synonymous SNV . 0 22 hPsi_associated_SNPs_3466 0 0 1 0 0 Cytosol 0.438747232484954 0.438718707182744 0.46494548 0 hPsi_site_8883 iPseU_CNN:0.46494548;iRNA_PseU:0 8884 chr6 44397565 44397565 1 + A G BLCA 44397564 + 44397544 44397584 41 AATGCTACAGTCAAGTTTTATATCTTCCTGGGCAGAGCCGC AATGCTACAGTCAAGTTTTATGTCTTCCTGGGCAGAGCCGC < 41bp 0.859588359247918 0.48276407446138 0.33365172 0.3062659 prediction 0.719176718495836 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44397564 chr6:44397565 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3467 0 0 1 0 1 Nucleus 0.438718614235675 0.438718308963632 0 0 hPsi_site_8884 iPseU_CNN:0;iRNA_PseU:0 8885 chr14 104139404 104139404 1 + A G STAD 104139403 + 104139383 104139423 41 GCAGTTAAATAACTTGGCCTTACTGTGCCAGAACCAGGGCA GCAGTTAAATAACTTGGCCTTGCTGTGCCAGAACCAGGGCA < 41bp 0.872220114628581 0.512663484894386 0.42671838 0.28613597 prediction 0.719113259468391 Functional Loss - KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104139403 chr14:104139404 synonymous SNV . 0 22 hPsi_associated_SNPs_3468 0 0 1 0 1 Cytosol 0.438714656811068 0.438718540482338 0 0 hPsi_site_8885 iPseU_CNN:0;iRNA_PseU:0 8886 chr10 91522548 91522548 1 + A G rs34354493 91522547 + 91522527 91522567 41 TGTACCACACCAGTGACAGTTAAGATTCCCAAGGCTCGGAA TGTACCACACCAGTGACAGTTGAGATTCCCAAGGCTCGGAA < 41bp 0.865700398113933 0.506161570315371 0.32604653 0.23712772 prediction 0.719077655597124 Functional Loss - KIF20B ENSG00000138182 CDS Human protein_coding chr10:91522547 chr10:91522548 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3469 0 0 1 1 1 Ribosome 0.438716322115033 0.438692247171085 0 0 hPsi_site_8886 iPseU_CNN:0;iRNA_PseU:0 8887 chrX 90691385 90691385 1 + A G HNSC 90691384 + 90691364 90691404 41 CCATCGATGGAAAAGTCCTCTATGTAGGGCGAGCACAGAAG CCATCGATGGAAAAGTCCTCTGTGTAGGGCGAGCACAGAAG < 41bp 0.870708903344587 0.51117780638079 0.27733785 0.30562764 prediction 0.719062193927595 Functional Loss - PABPC5 ENSG00000174740 CDS Human protein_coding chrX:90691384 chrX:90691385 nonsynonymous SNV 0.881 3 22 hPsi_associated_SNPs_3470 0 0 0 0 0 exosome 0.438642413645745 0.4387160994573 0 0 hPsi_site_8887 iPseU_CNN:0;iRNA_PseU:0 8888 chr8 11174256 11174256 1 + A G COAD 11174255 + 11174235 11174275 41 GCAGAAGTGGGAGGCTCCTGTATTTCTTCTCTTCTTGGACT GCAGAAGTGGGAGGCTCCTGTGTTTCTTCTCTTCTTGGACT < 41bp 0.859511107743596 0.468696525577969 0.58253807 0.33222646 prediction 0.719022215487191 Functional Loss - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11174255 chr8:11174256 synonymous SNV . 0 22 hPsi_associated_SNPs_3471 0 0 1 0 1 Ribosome 0.438718315544292 0.438718581278467 0.16507614 0 hPsi_site_8888 iPseU_CNN:0.16507614;iRNA_PseU:0 8889 chr16 66997713 66997713 1 + A G rs61749484 66997712 + 66997692 66997732 41 GCCACCTCTGCAGGTCATGGTATGGGTCCATGGAGGCGCTC GCCACCTCTGCAGGTCATGGTGTGGGTCCATGGAGGCGCTC < 41bp 0.859488056729009 0.463532582311823 0.6836175 0.51845515 prediction 0.718976113458017 Functional Loss - CES3 ENSG00000172828 CDS Human protein_coding chr16:66997712 chr16:66997713 synonymous SNV . 0 22 hPsi_associated_SNPs_3472 0 0 0 0 1 nucleolus 0.438795937164143 0.438804139250841 0.3303247 0 hPsi_site_8889 iPseU_CNN:0.3303247;iRNA_PseU:0 8890 chr1 46073597 46073597 1 + A G rs76379164 46073596 + 46073576 46073616 41 ACAACTGGTAGGTCAAGAAGTACCACCTGCTGAAGAGTCAC ACAACTGGTAGGTCAAGAAGTGCCACCTGCTGAAGAGTCAC < 41bp 0.859479902547941 0.489304781866528 0.38308093 0.28564048 prediction 0.718959805095883 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073596 chr1:46073597 synonymous SNV . 0 22 hPsi_associated_SNPs_3473 0 0 1 0 0 Nucleus 0.438718592994901 0.438718633889448 0 0 hPsi_site_8890 iPseU_CNN:0;iRNA_PseU:0 8891 chr5 7870928 7870928 1 + A G rs114427781 7870927 + 7870907 7870947 41 GATGAGGAGGTTTCTGTTACTATATGCTACACAGCAGGGAC GATGAGGAGGTTTCTGTTACTGTATGCTACACAGCAGGGAC < 41bp 0.870746687221912 0.511273784352664 0.4616028 0.27785093 prediction 0.718945805738495 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7870927 chr5:7870928 synonymous SNV . 0 22 hPsi_associated_SNPs_3474 0 0 1 2 1 Nucleus 0.438862181896095 0.438729378230331 0 0 hPsi_site_8891 iPseU_CNN:0;iRNA_PseU:0 8892 chr8 143784660 143784660 1 + A G LUAD 143784659 + 143784639 143784679 41 TAAAATTCGCTACTGCAATTTAGAGGGGCCACCTATCAACT TAAAATTCGCTACTGCAATTTGGAGGGGCCACCTATCAACT < 41bp 0.866263465568491 0.506807317878127 0.6952531 0.311897 prediction 0.718912295380728 Functional Loss - LY6K ENSG00000160886 CDS Human protein_coding chr8:143784659 chr8:143784660 synonymous SNV . 0 22 hPsi_associated_SNPs_3475 0 0 1 0 0 nucleus 0.438718572495556 0.438718593109139 0.3905062 0 hPsi_site_8892 iPseU_CNN:0.3905062;iRNA_PseU:0 8893 chr17 70118949 70118949 1 + A G COAD 70118948 + 70118928 70118968 41 AGGACCACCCGGATTACAAGTACCAGCCGCGGCGGAGGAAG AGGACCACCCGGATTACAAGTGCCAGCCGCGGCGGAGGAAG < 41bp 0.8845268326335 0.52509931274718 0.7345387 0.27310824 prediction 0.718855039772639 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70118948 chr17:70118949 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3476 0 0 1 0 1 Cytosol 0.438719748179366 0.438718392585822 0.4690774 0 hPsi_site_8893 iPseU_CNN:0.4690774;iRNA_PseU:0 8894 chr5 7870973 7870973 1 + A G rs1801394 7870972 + 7870952 7870992 41 AAAGGCCATCGCAGAAGAAATATGTGAGCAAGCTGTGGTAC AAAGGCCATCGCAGAAGAAATGTGTGAGCAAGCTGTGGTAC < 41bp 0.869274256011051 0.509862074319003 0.32900584 0.23266944 prediction 0.718824363384096 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7870972 chr5:7870973 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_3477 6 0 1 2 2 Nucleus 0.439285031373134 0.440205969267307 0 0 hPsi_site_8894 iPseU_CNN:0;iRNA_PseU:0 8895 chr19 10662938 10662938 1 + A G LGG 10662937 + 10662917 10662957 41 GCCAAGATGGACCCAAGCTGTACCGTGGGCTTCTATGCTGG GCCAAGATGGACCCAAGCTGTGCCGTGGGCTTCTATGCTGG < 41bp 0.859391546271453 0.464376282877189 0.8357274 0.26569378 prediction 0.718783092542906 Functional Loss - ATG4D ENSG00000130734 CDS Human protein_coding chr19:10662937 chr19:10662938 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_3478 0 0 1 1 0 Ribosome 0.438718600882206 0.438718602196917 0.6714548 0 hPsi_site_8895 iPseU_CNN:0.6714548;iRNA_PseU:0 8896 chr1 45115422 45115422 1 + A G STAD 45115421 + 45115401 45115441 41 AGCTATCTCGTGGGGACCGTTACAAATGCCTCATCTGCATG AGCTATCTCGTGGGGACCGTTGCAAATGCCTCATCTGCATG < 41bp 0.859382171965813 0.478595483450176 0.9493109 0.6845866 prediction 0.718764343931625 Functional Loss - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45115421 chr1:45115422 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3479 0 0 0 0 2 Ribosome 0.438718459436002 0.43871785588315 0.5294486 0 hPsi_site_8896 iPseU_CNN:0.5294486;iRNA_PseU:0 8897 chr22 31522959 31522959 1 + A G COAD 31522958 + 31522938 31522978 41 TGCTGCTGTTCGCCAAGTACTACCACCTGCCCTTCCTGCGA TGCTGCTGTTCGCCAAGTACTGCCACCTGCCCTTCCTGCGA < 41bp 0.859357092103376 0.462157628576362 0.5202932 0.29119578 prediction 0.718714184206753 Functional Loss - INPP5J ENSG00000185133 CDS Human protein_coding chr22:31522958 chr22:31522959 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3480 0 0 0 0 2 Cytosol 0.438668257004984 0.43874061299419 0.0405864 0 hPsi_site_8897 iPseU_CNN:0.0405864;iRNA_PseU:0 8898 chr1 36039895 36039895 1 + A G rs186388506 36039894 + 36039874 36039914 41 GCCTTGACCCGCGCCGTGACTATGCCACTGCCGTGCCCCGG GCCTTGACCCGCGCCGTGACTGTGCCACTGCCGTGCCCCGG < 41bp 0.859356106257063 0.492608244454055 0.63477886 0.33243108 prediction 0.718712212514125 Functional Loss - TFAP2E ENSG00000116819 CDS Human protein_coding chr1:36039894 chr1:36039895 nonsynonymous SNV 0.980 5 22 hPsi_associated_SNPs_3481 0 0 1 0 0 nucleoplasm 0.438698736262497 0.438723627869998 0.26955772 0 hPsi_site_8898 iPseU_CNN:0.26955772;iRNA_PseU:0 8899 chr2 61343163 61343163 1 + A G STAD 61343162 + 61343142 61343182 41 TAGACAACCAAAAAAGCAGGTATCTTCACCCTGTGCCCAGA TAGACAACCAAAAAAGCAGGTGTCTTCACCCTGTGCCCAGA < 41bp 0.882726779402314 0.523421357733821 0.78188205 0.3917869 prediction 0.718610843336987 Functional Loss - KIAA1841 ENSG00000162929 CDS Human protein_coding chr2:61343162 chr2:61343163 synonymous SNV . 0 22 hPsi_associated_SNPs_3482 0 0 1 0 2 cytosol 0.438679344171631 0.438716099140111 0.5637641 0 hPsi_site_8899 iPseU_CNN:0.5637641;iRNA_PseU:0 8900 chr11 70281773 70281773 1 + A G UCEC 70281772 + 70281752 70281792 41 GATGGAAGTTAACCCGGAGCTAAGTCACCCAGAGCACAGGA GATGGAAGTTAACCCGGAGCTGAGTCACCCAGAGCACAGGA < 41bp 0.865561537758159 0.506289260388131 0.34110016 0.2151568 prediction 0.718544554740056 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281772 chr11:70281773 synonymous SNV . 0 22 hPsi_associated_SNPs_3483 0 0 1 2 1 Ribosome 0.438705269649024 0.440234692037547 0 0 hPsi_site_8900 iPseU_CNN:0;iRNA_PseU:0 8901 chr16 21985271 21985271 1 + A G UCEC 21985270 + 21985250 21985290 41 GGACTCTTTGGGATTTATACTATCTCCCAGGCCACAGCTGC GGACTCTTTGGGATTTATACTGTCTCCCAGGCCACAGCTGC < 41bp 0.875406851041447 0.516172931102196 0.35214916 0.22738984 prediction 0.718467839878502 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21985270 chr16:21985271 nonsynonymous SNV 0.960 0 22 hPsi_associated_SNPs_3484 0 0 1 0 2 Ribosome 0.438197909233901 0.438511575463319 0 0 hPsi_site_8901 iPseU_CNN:0;iRNA_PseU:0 8902 chr2 160608952 160608952 1 + A G UCEC 160608951 + 160608931 160608971 41 AGAAGAAGAAGAAGGTGACTTATGTAGAATTTGTCAAATGG AGAAGAAGAAGAAGGTGACTTGTGTAGAATTTGTCAAATGG < 41bp 0.859210684693655 0.493595536693609 0.28143924 0.26700634 prediction 0.71842136938731 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160608951 chr2:160608952 synonymous SNV . 0 22 hPsi_associated_SNPs_3485 0 0 1 1 1 Cytosol 0.438718593116854 0.438718593313855 0 0 hPsi_site_8902 iPseU_CNN:0;iRNA_PseU:0 8903 chr17 80684833 80684833 1 + A G LUAD 80684832 + 80684812 80684852 41 TTTTTGACCCAGCTTCTTTCTACGGCCACTCGGAATATGAG TTTTTGACCCAGCTTCTTTCTGCGGCCACTCGGAATATGAG < 41bp 0.859207136380451 0.469552457468195 0.6658277 0.33084399 prediction 0.718414272760903 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684832 chr17:80684833 nonsynonymous SNV 0.686 4 22 hPsi_associated_SNPs_3486 0 0 1 0 0 Ribosome 0.438718594402389 0.438718593478475 0.3316554 0 hPsi_site_8903 iPseU_CNN:0.3316554;iRNA_PseU:0 8904 chr17 41369865 41369865 1 + A G rs146630454 41369864 + 41369844 41369884 41 AGGCACCTGCAACCCTGGTCTATATCTCCCACAACTCCCTG AGGCACCTGCAACCCTGGTCTGTATCTCCCACAACTCCCTG < 41bp 0.861771645938562 0.502576165269503 0.37538028 0.30718654 prediction 0.718390961338119 Functional Loss - TMEM106A ENSG00000236383 ncRNA_intronic Human protein_coding chr17:41369864 chr17:41369865 . . 0 22 hPsi_associated_SNPs_3487 0 0 0 0 0 chromatin 0.438718500273267 0.438719599718397 0 0 hPsi_site_8904 iPseU_CNN:0;iRNA_PseU:0 8905 chr14 23344947 23344947 1 + A G SKCM 23344946 + 23344926 23344966 41 GAGAGCTCCCGACTACTGCGTAGTCTCACCCACTTCAGCAA GAGAGCTCCCGACTACTGCGTGGTCTCACCCACTTCAGCAA < 41bp 0.859179380808156 0.465635470078897 0.61782473 0.28649032 prediction 0.718358761616313 Functional Loss - LRP10 ENSG00000197324 CDS Human protein_coding chr14:23344946 chr14:23344947 nonsynonymous SNV 0.958 0 22 hPsi_associated_SNPs_3488 0 0 1 0 0 Ribosome 0.438735186507494 0.438600874680748 0.23564946 0 hPsi_site_8905 iPseU_CNN:0.23564946;iRNA_PseU:0 8906 chr1 117552712 117552712 1 + A G BLCA 117552711 + 117552691 117552731 41 GGGTGCGAAGCGGAGACGTCTACGTGGAGAGGGTCCAGGGC GGGTGCGAAGCGGAGACGTCTGCGTGGAGAGGGTCCAGGGC < 41bp 0.88522271899477 0.526107496584027 0.48511842 0.20482701 prediction 0.718230444821485 Functional Loss - CD101 ENSG00000134256 CDS Human protein_coding chr1:117552711 chr1:117552712 nonsynonymous SNV 0.669 4 22 hPsi_associated_SNPs_3489 0 0 0 0 0 cytosol 0.438688542685941 0.438700992438496 0 0 hPsi_site_8906 iPseU_CNN:0;iRNA_PseU:0 8907 chr1 231409687 231409687 1 + A G COAD 231409686 + 231409666 231409706 41 AGGACTTTGAAGAAGGCTGTTACCTGCTTTGTAAAAGTGAA AGGACTTTGAAGAAGGCTGTTGCCTGCTTTGTAAAAGTGAA < 41bp 0.85908728081208 0.494068334716766 0.6945238 0.306587 prediction 0.718174561624159 Functional Loss - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231409686 chr1:231409687 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_3490 0 0 1 0 1 Cytosol 0.438718592313271 0.438718592789463 0.3890476 0 hPsi_site_8907 iPseU_CNN:0.3890476;iRNA_PseU:0 8908 chr1 114442966 114442966 1 + T C BLCA 114442967 - 114442947 114442987 41 TATTGAACTTTCTGCTACGCTACCAACCCCGCAGTGAGGAA TATTGAACTTTCTGCTACGCTGCCAACCCCGCAGTGAGGAA < 41bp 0.859087011321395 0.481438250519155 0.6318421 0.20325223 prediction 0.71817402264279 Functional Loss - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442967 chr1:114442966 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3491 0 0 1 0 0 chromatin 0.437980448909658 0.440941954591577 0.2636842 0 hPsi_site_8908 iPseU_CNN:0.2636842;iRNA_PseU:0 8909 chrX 119504588 119504588 1 + A G ACC 119504587 + 119504567 119504607 41 CAGGCCTGATCTTACTCATTTACTTCTTCTTCTATGCCTCC CAGGCCTGATCTTACTCATTTGCTTCTTCTTCTATGCCTCC < 41bp 0.859014025128611 0.473362370966542 0.32791203 0.28690326 prediction 0.718028050257222 Functional Loss - ATP1B4 ENSG00000101892 CDS Human protein_coding chrX:119504587 chrX:119504588 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_3492 0 0 0 0 1 Nucleus 0.4387185929951 0.438718533505067 0 0 hPsi_site_8909 iPseU_CNN:0;iRNA_PseU:0 8910 chr15 68125572 68125572 1 + A G LUAD 68125571 + 68125551 68125591 41 ACCAGGAGCGGAAGGCGCGCTATGCCATCCAGCAGAAATTG ACCAGGAGCGGAAGGCGCGCTGTGCCATCCAGCAGAAATTG < 41bp 0.858885913272185 0.476581654409016 0.631298 0.34931427 prediction 0.717771826544371 Functional Loss - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68125571 chr15:68125572 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3493 0 0 0 0 2 exosome 0.438863800610322 0.438813297264265 0.262596 0 hPsi_site_8910 iPseU_CNN:0.262596;iRNA_PseU:0 8911 chr4 42051452 42051452 1 + A G rs138544445 42051451 + 42051431 42051471 41 ATTTATACCGGTTCAGCAAGTATGTTCTCAGAAGCTATACA ATTTATACCGGTTCAGCAAGTGTGTTCTCAGAAGCTATACA < 41bp 0.864465496428268 0.505588279250648 0.32970038 0.26402307 prediction 0.717754434355239 Functional Loss - SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42051451 chr4:42051452 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3494 0 0 1 0 2 Endoplasmic reticulum 0.438722432555677 0.438738010990086 0 0 hPsi_site_8911 iPseU_CNN:0;iRNA_PseU:0 8912 chr19 10225071 10225071 1 + A G rs75945356 10225070 + 10225050 10225090 41 TGGCCCTCTACGCCAGCTCCTATGTGCCCTACCACATCATG TGGCCCTCTACGCCAGCTCCTGTGTGCCCTACCACATCATG < 41bp 0.874148662170909 0.515286698801753 0.44802687 0.31250396 prediction 0.717723926738311 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225070 chr19:10225071 nonsynonymous SNV 0.020 3 22 hPsi_associated_SNPs_3495 0 0 1 0 0 unknown 0.438718611667938 0.438718593195843 0 0 hPsi_site_8912 iPseU_CNN:0;iRNA_PseU:0 8913 chr19 8842043 8842043 1 + A G rs112257905 8842042 + 8842022 8842062 41 TTTCCCTCATCGCCACCTCCTACGGCCACGTGTTGCAGGCT TTTCCCTCATCGCCACCTCCTGCGGCCACGTGTTGCAGGCT < 41bp 0.858778265475545 0.497537768220684 0.3761512 0.21261412 prediction 0.717556530951091 Functional Loss - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8842042 chr19:8842043 nonsynonymous SNV 0.016 4 22 hPsi_associated_SNPs_3496 0 0 0 0 0 unknown 0.437617492950291 0.438812751447907 0 0 hPsi_site_8913 iPseU_CNN:0;iRNA_PseU:0 8914 chr16 2287052 2287052 1 + A G COAD 2287051 + 2287031 2287071 41 CTCCCCAGATCCTGGCTGGCTATGACCTCGCGCTGGTGCAG CTCCCCAGATCCTGGCTGGCTGTGACCTCGCGCTGGTGCAG < 41bp 0.858765065092686 0.490016387484796 0.6752184 0.39403713 prediction 0.717530130185372 Functional Loss - DNASE1L2 ENSG00000167968 CDS Human protein_coding chr16:2287051 chr16:2287052 nonsynonymous SNV 0.352 3 22 hPsi_associated_SNPs_3497 0 0 1 0 2 exosome 0.438722788867906 0.438728250505663 0.3504368 0 hPsi_site_8914 iPseU_CNN:0.3504368;iRNA_PseU:0 8915 chr9 125377792 125377792 1 + A G STAD 125377791 + 125377771 125377811 41 ATGGCACCCTCAGTTGGGTCTACTTCCGGCCCCTTTCCAGC ATGGCACCCTCAGTTGGGTCTGCTTCCGGCCCCTTTCCAGC < 41bp 0.858762364415957 0.493704264190979 0.35046542 0.20953181 prediction 0.717524728831914 Functional Loss - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377791 chr9:125377792 nonsynonymous SNV 0.186 4 22 hPsi_associated_SNPs_3498 0 0 0 0 0 unknown 0.438718592713929 0.43871859299433 0 0 hPsi_site_8915 iPseU_CNN:0;iRNA_PseU:0 8916 chr6 88374525 88374525 1 + A G UCEC 88374524 + 88374504 88374544 41 CCCCAGACATCTGCATAGCATACAAACTGCACCTAGAGTGT CCCCAGACATCTGCATAGCATGCAAACTGCACCTAGAGTGT < 41bp 0.858761157805079 0.479904339312704 0.5146512 0.3028646 prediction 0.717522315610158 Functional Loss - ORC3 ENSG00000135336 CDS Human protein_coding chr6:88374524 chr6:88374525 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3499 0 0 1 0 2 Cytosol 0.438753488296201 0.438713274637326 0.0293024 0 hPsi_site_8916 iPseU_CNN:0.0293024;iRNA_PseU:0 8917 chr3 9754491 9754491 1 + A G UCEC 9754490 + 9754470 9754510 41 CAGACCCCTTCCTTGTGTTCTACAGGAGCAATGAGGATGGC CAGACCCCTTCCTTGTGTTCTGCAGGAGCAATGAGGATGGC < 41bp 0.882578868342495 0.523826769255153 0.45391667 0.23055115 prediction 0.717504198174684 Functional Loss - CPNE9 ENSG00000144550 CDS Human protein_coding chr3:9754490 chr3:9754491 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3500 0 0 0 0 2 exosome 0.438723578438273 0.438669080108475 0 0 hPsi_site_8917 iPseU_CNN:0;iRNA_PseU:0 8918 chr1 46650032 46650032 1 + A G UCEC 46650031 + 46650011 46650051 41 CTCTTGGTTTCCTGGGCTGCTATGGTGCTAAGACTGAGAGC CTCTTGGTTTCCTGGGCTGCTGTGGTGCTAAGACTGAGAGC < 41bp 0.879781088913254 0.521030942548613 0.29500246 0.25304955 prediction 0.717500292729281 Functional Loss - TSPAN1 ENSG00000117472 CDS Human protein_coding chr1:46650031 chr1:46650032 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_3501 0 0 0 0 1 Ribosome 0.43871869840761 0.438717375076376 0 0 hPsi_site_8918 iPseU_CNN:0;iRNA_PseU:0 8919 chr10 85974381 85974381 1 + A G rs3814212 85974380 + 85974360 85974400 41 AACAAGGCTTACTTCTAGTGTATGCCCTATGACCCCCCATC AACAAGGCTTACTTCTAGTGTGTGCCCTATGACCCCCCATC < 41bp 0.874791964927875 0.516057608815744 0.4269956 0.30914325 prediction 0.717468712224263 Functional Loss - CDHR1 ENSG00000148600 UTR3 Human protein_coding chr10:85974380 chr10:85974381 . . 0 22 hPsi_associated_SNPs_3502 2 0 0 0 0 cytosol 0.438718592801997 0.438718590612494 0 0 hPsi_site_8919 iPseU_CNN:0;iRNA_PseU:0 8920 chr5 43675653 43675653 1 + A G LUAD 43675652 + 43675632 43675672 41 CTAATGTGATTCTTGGAGGCTATGGCACCACTTCAACAGCT CTAATGTGATTCTTGGAGGCTGTGGCACCACTTCAACAGCT < 41bp 0.858670991225318 0.470025085882704 0.50389564 0.36245975 prediction 0.717341982450637 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43675652 chr5:43675653 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3503 0 0 1 0 1 Endoplasmic reticulum 0.438712335834889 0.438313755049343 0.00779127999999996 0 hPsi_site_8920 iPseU_CNN:0.00779127999999996;iRNA_PseU:0 8921 chr1 173743534 173743534 1 + A G CHOL 173743533 + 173743513 173743553 41 GGCTGTGTTAGGAGGGTTCTTATATGCTGTAGGTGGCTCTG GGCTGTGTTAGGAGGGTTCTTGTATGCTGTAGGTGGCTCTG < 41bp 0.880300764076339 0.521639718731717 0.29612538 0.23674539 prediction 0.717322090689244 Functional Loss - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173743533 chr1:173743534 synonymous SNV . 0 22 hPsi_associated_SNPs_3504 0 0 0 0 2 Cytosol 0.438718592988489 0.438718593094374 0 0 hPsi_site_8921 iPseU_CNN:0;iRNA_PseU:0 8922 chr10 47087496 47087496 1 + A G UCEC 47087495 + 47087475 47087515 41 TGGTCTGTTATGCACGCATCTACCGGCGCCTGCAGAGGCAG TGGTCTGTTATGCACGCATCTGCCGGCGCCTGCAGAGGCAG < 41bp 0.876375689513943 0.517838859259715 0.38285154 0.16315985 prediction 0.717073660508456 Functional Loss - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087495 chr10:47087496 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_3505 0 0 0 0 0 unknown 0.438696076090543 0.437871882711899 0 0 hPsi_site_8922 iPseU_CNN:0;iRNA_PseU:0 8923 chr8 144733430 144733430 1 + A G KIRC 144733429 + 144733409 144733449 41 AAAAGCCCTATGTGTGCAGTTATTGTGGGAAAGGCTTTATT AAAAGCCCTATGTGTGCAGTTGTTGTGGGAAAGGCTTTATT < 41bp 0.858525900120551 0.485431064295132 0.5655491 0.32251757 prediction 0.717051800241102 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144733429 chr8:144733430 nonsynonymous SNV 0.955 1 22 hPsi_associated_SNPs_3506 0 0 1 0 0 cytosol 0.438746600801661 0.438728830974884 0.1310982 0 hPsi_site_8923 iPseU_CNN:0.1310982;iRNA_PseU:0 8924 chr16 70180088 70180088 1 + A G rs2287978 70180087 + 70180067 70180107 41 ATGTGCTGTCTGAGTTGTCCTATGCCCCTATGACTCCAGAC ATGTGCTGTCTGAGTTGTCCTGTGCCCCTATGACTCCAGAC < 41bp 0.858516833220751 0.464080214456805 0.3752019 0.21943307 prediction 0.717033666441502 Functional Loss - PDPR ENSG00000090857 CDS Human protein_coding chr16:70180087 chr16:70180088 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3507 0 0 0 0 2 Nucleus 0.438877439430339 0.439079520086525 0 0 hPsi_site_8924 iPseU_CNN:0;iRNA_PseU:0 8925 chr3 17052214 17052214 1 + A G UCEC 17052213 + 17052193 17052233 41 GTCCCTCCGACATCACAGGATATATTCGAGCTCTTAAAATG GTCCCTCCGACATCACAGGATGTATTCGAGCTCTTAAAATG < 41bp 0.858505636872863 0.478219972768081 0.6220554 0.3256089 prediction 0.717011273745727 Functional Loss - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17052213 chr3:17052214 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_3508 0 0 0 0 0 nucleus 0.438707776812029 0.438716165109342 0.2441108 0 hPsi_site_8925 iPseU_CNN:0.2441108;iRNA_PseU:0 8926 chr10 74631185 74631185 1 + A G rs35454217 74631184 + 74631164 74631204 41 GAAGAGGACCACTTTGGTGCTATGGGGTGGCCTTGCCTACA GAAGAGGACCACTTTGGTGCTGTGGGGTGGCCTTGCCTACA < 41bp 0.891226467918814 0.532724598724597 0.6954099 0.61867464 prediction 0.717003738388434 Functional Loss - MCU ENSG00000156026 CDS Human protein_coding chr10:74631184 chr10:74631185 synonymous SNV . 0 22 hPsi_associated_SNPs_3509 0 0 1 3 1 Ribosome 0.438714619698107 0.438496211258575 0.15347052 0 hPsi_site_8926 iPseU_CNN:0.15347052;iRNA_PseU:0 8927 chr8 42012297 42012297 1 + A G COAD 42012296 + 42012276 42012316 41 TCAGCCGTTCTGTTTGTGATTACTTTTTTGAGGCGCAAGAG TCAGCCGTTCTGTTTGTGATTGCTTTTTTGAGGCGCAAGAG < 41bp 0.858488563195979 0.470124029670246 0.32779258 0.282927 prediction 0.716977126391958 Functional Loss - AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42012296 chr8:42012297 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3510 0 0 1 0 0 Nucleus 0.438718633011868 0.438718542735635 0 0 hPsi_site_8927 iPseU_CNN:0;iRNA_PseU:0 8928 chrX 51639969 51639969 1 + A G CHOL 51639968 + 51639948 51639988 41 AGGTCCTCCTGACTGGCCGCTACCACCCGACTGGCCACTGC AGGTCCTCCTGACTGGCCGCTGCCACCCGACTGGCCACTGC < 41bp 0.858482984185886 0.469266995946301 0.4715935 0.18767333 prediction 0.716965968371772 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51639968 chrX:51639969 synonymous SNV . 0 22 hPsi_associated_SNPs_3511 0 0 1 0 0 chromatin 0.438570515054888 0.43874378639978 0 0 hPsi_site_8928 iPseU_CNN:0;iRNA_PseU:0 8929 chr9 132482960 132482960 1 + A G rs567572265 132482959 + 132482939 132482979 41 CTGCCTCGCTGCTCAAGTCCTACAGCCAGGAGGCCGCCATC CTGCCTCGCTGCTCAAGTCCTGCAGCCAGGAGGCCGCCATC < 41bp 0.876038533883932 0.517561906467266 0.4406794 0.20084292 prediction 0.716953254833331 Functional Loss - PRRX2 ENSG00000167157 CDS Human protein_coding chr9:132482959 chr9:132482960 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3512 0 0 0 0 2 chromatin 0.438718591769938 0.438718593461854 0 0 hPsi_site_8929 iPseU_CNN:0;iRNA_PseU:0 8930 chr11 76826545 76826545 1 + A G rs143460583 76826544 + 76826524 76826564 41 GGTGCGCCTGGGCCACGGCCTACTGGCCTTCTTCAAGTCAG GGTGCGCCTGGGCCACGGCCTGCTGGCCTTCTTCAAGTCAG < 41bp 0.85844656468795 0.458513174082597 0.6965131 0.3064102 prediction 0.7168931293759 Functional Loss - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76826544 chr11:76826545 synonymous SNV . 0 22 hPsi_associated_SNPs_3513 0 0 0 0 1 Endoplasmic reticulum 0.438718138928741 0.438718592958094 0.3930262 0 hPsi_site_8930 iPseU_CNN:0.3930262;iRNA_PseU:0 8931 chr10 105202136 105202136 1 + A G UCEC 105202135 + 105202115 105202155 41 GCTCCATTCTGTGGCTGCAGTACATGGCTTTCCACCTGCAG GCTCCATTCTGTGGCTGCAGTGCATGGCTTTCCACCTGCAG < 41bp 0.878715911746378 0.520277549147558 0.5131196 0.31818292 prediction 0.71687672519764 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105202135 chr10:105202136 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3514 0 0 1 0 1 Nucleus 0.438718592374754 0.438717906959151 0.0262392 0 hPsi_site_8931 iPseU_CNN:0.0262392;iRNA_PseU:0 8932 chr10 95660642 95660642 1 + A G rs141763133 95660641 + 95660621 95660661 41 GATGCCACAGTTATCACGTTTAGCAGTCCAGTGTTTACGTC GATGCCACAGTTATCACGTTTGGCAGTCCAGTGTTTACGTC < 41bp 0.858406260863594 0.484562274410701 0.30772296 0.25676626 prediction 0.716812521727188 Functional Loss - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660641 chr10:95660642 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_3515 0 0 1 0 0 exosome 0.438719310490489 0.438718560170528 0 0 hPsi_site_8932 iPseU_CNN:0;iRNA_PseU:0 8933 chr20 39795459 39795459 1 + A G LGG 39795458 + 39795438 39795478 41 ACCGCAAGATGAAGCTGCGCTATCCCATCAACGAGGAGGCA ACCGCAAGATGAAGCTGCGCTGTCCCATCAACGAGGAGGCA < 41bp 0.858403640929926 0.463715310077889 0.39204562 0.3074971 prediction 0.716807281859853 Functional Loss - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39795458 chr20:39795459 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_3516 0 0 1 0 1 Cytosol 0.438609451472332 0.438710796071891 0 0 hPsi_site_8933 iPseU_CNN:0;iRNA_PseU:0 8934 chr3 45052750 45052750 1 + A G COAD 45052749 + 45052729 45052769 41 TGGCAAGCGTGTGGGCAAGGTACTGCATGCCTCCTTGCAGA TGGCAAGCGTGTGGGCAAGGTGCTGCATGCCTCCTTGCAGA < 41bp 0.858320378201199 0.465691227986612 0.8000636 0.233576 prediction 0.716640756402398 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45052749 chr3:45052750 synonymous SNV . 0 22 hPsi_associated_SNPs_3517 0 0 1 0 1 Ribosome 0.438710387013112 0.438380749998269 0.6001272 0 hPsi_site_8934 iPseU_CNN:0.6001272;iRNA_PseU:0 8935 chr10 112839579 112839579 1 + A G rs553668 112839578 + 112839558 112839598 41 CCCAACTCTCTCTCTCTTTTTAAAGAAAAATGCTAAGGGCA CCCAACTCTCTCTCTCTTTTTGAAGAAAAATGCTAAGGGCA < 41bp 0.858315953825148 0.499126621713985 0.2940161 0.19418773 prediction 0.716631907650297 Functional Loss - ADRA2A ENSG00000150594 UTR3 Human protein_coding chr10:112839578 chr10:112839579 . . 0 22 hPsi_associated_SNPs_3518 0 0 1 0 0 exosome 0.438718590381563 0.438718590486358 0 0 hPsi_site_8935 iPseU_CNN:0;iRNA_PseU:0 8936 chr3 149374934 149374934 1 + T C SKCM 149374935 - 149374915 149374955 41 ATCCTGCCGGAGTCTTTCTTTAAGGAGCCTGATTCGGGCTC ATCCTGCCGGAGTCTTTCTTTGAGGAGCCTGATTCGGGCTC < 41bp 0.858295282944117 0.47042950312073 0.5720873 0.4121139 prediction 0.716590565888233 Functional Loss - WWTR1 ENSG00000018408 CDS Human protein_coding chr3:149374935 chr3:149374934 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_3519 0 0 1 0 0 Endoplasmic reticulum 0.438718593030442 0.43877999091035 0.1441746 0 hPsi_site_8936 iPseU_CNN:0.1441746;iRNA_PseU:0 8937 chr19 16268598 16268598 1 + A G LUAD 16268597 + 16268577 16268617 41 CGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCA CGCCACCCTTTGCCCCTGGGTGCTGCTAGAGAACAGGTCCA < 41bp 0.877415499990821 0.519217635132025 0.8277075 0.31938964 prediction 0.71639572971759 Functional Loss - HSH2D ENSG00000196684 CDS Human protein_coding chr19:16268597 chr19:16268598 nonsynonymous SNV 0.897 3 22 hPsi_associated_SNPs_3520 0 0 0 0 0 exosome 0.438710252332376 0.438718714985158 0.655415 0 hPsi_site_8937 iPseU_CNN:0.655415;iRNA_PseU:0 8938 chrX 100808046 100808046 1 + A G LUAD 100808045 + 100808025 100808065 41 TGGGACGAAGACGAGGAGTCTACGGACACCTCAGAGATTGG TGGGACGAAGACGAGGAGTCTGCGGACACCTCAGAGATTGG < 41bp 0.858179036196184 0.474096493246212 0.25704014 0.1651896 prediction 0.716358072392367 Functional Loss - ARMCX1 ENSG00000126947 CDS Human protein_coding chrX:100808045 chrX:100808046 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_3521 0 0 0 0 0 exosome 0.438637566533322 0.438718175510821 0 0 hPsi_site_8938 iPseU_CNN:0;iRNA_PseU:0 8939 chr22 50599429 50599429 1 + A G LIHC 50599428 + 50599408 50599448 41 GCTTTGCTGGAATACAGTATTACAAACGGTGTTTACATGGG GCTTTGCTGGAATACAGTATTGCAAACGGTGTTTACATGGG < 41bp 0.858176607943235 0.47795395929451 0.64532375 0.5737908 prediction 0.71635321588647 Functional Loss - MOV10L1 ENSG00000073146 CDS Human protein_coding chr22:50599428 chr22:50599429 nonsynonymous SNV 0.020 0 22 hPsi_associated_SNPs_3522 0 0 0 0 2 exosome 0.438718592902636 0.438718592726379 0.1430659 0 hPsi_site_8939 iPseU_CNN:0.1430659;iRNA_PseU:0 8940 chr15 49620177 49620177 1 + A G GBM 49620176 + 49620156 49620196 41 GGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGG GGGGCTCAAGGGTCACGACTTGCTGGAGCAGGATGGGGAGG < 41bp 0.870221630492849 0.512056140197866 0.26176453 0.17243573 prediction 0.716330980589965 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49620176 chr15:49620177 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3523 0 0 1 0 1 Nucleus 0.438718633180417 0.438718424930911 0 0 hPsi_site_8940 iPseU_CNN:0;iRNA_PseU:0 8941 chr16 21416220 21416220 1 + A G STAD 21416219 + 21416199 21416239 41 GAGGGTGGAAGGGGAGTGAGTAGACACTCGGGAGGTGTCTT GAGGGTGGAAGGGGAGTGAGTGGACACTCGGGAGGTGTCTT < 41bp 0.858808089937903 0.500650426434481 0.43613645 0.34008476 prediction 0.716315327006843 Functional Loss - NPIPB3 ENSG00000169246 CDS Human protein_coding chr16:21416219 chr16:21416220 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_3524 0 0 0 0 0 Cytosol 0.438718587881052 0.438723578353216 0 0 hPsi_site_8941 iPseU_CNN:0;iRNA_PseU:0 8942 chr2 9621464 9621464 1 + A G LUSC 9621463 + 9621443 9621483 41 GGAGGAGTACGCTGCGAACCTAAAGAGCATGGTGCAGTACC GGAGGAGTACGCTGCGAACCTGAAGAGCATGGTGCAGTACC < 41bp 0.858153631123564 0.480580172839457 0.271668 0.18230775 prediction 0.716307262247129 Functional Loss - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9621463 chr2:9621464 synonymous SNV . 0 22 hPsi_associated_SNPs_3525 0 0 1 1 1 Ribosome 0.438718593399944 0.438718590108468 0 0 hPsi_site_8942 iPseU_CNN:0;iRNA_PseU:0 8943 chr12 56522465 56522465 1 + A G BRCA 56522464 + 56522444 56522484 41 AGCTCACTGCGAAAACTCTCTATATGAGTCATCGAGAGCTA AGCTCACTGCGAAAACTCTCTGTATGAGTCATCGAGAGCTA < 41bp 0.869224845914683 0.511076126343291 0.5269537 0.46555898 prediction 0.716297439142784 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56522464 chr12:56522465 nonsynonymous SNV 0.769 1 22 hPsi_associated_SNPs_3526 0 0 0 0 1 Endoplasmic reticulum 0.439291024443427 0.440885388847499 0.0539073999999999 0 hPsi_site_8943 iPseU_CNN:0.0539073999999999;iRNA_PseU:0 8944 chr1 154317948 154317948 1 + A G SKCM 154317947 + 154317927 154317967 41 GAATGTGCAAGTTTCTTTGCTATTTCTTCTACAAAAACTTT GAATGTGCAAGTTTCTTTGCTGTTTCTTCTACAAAAACTTT < 41bp 0.858146750567579 0.475981030449259 0.30933887 0.25015527 prediction 0.716293501135158 Functional Loss - ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154317947 chr1:154317948 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3527 0 0 1 0 1 chromatin 0.438722219287904 0.438777744749824 0 0 hPsi_site_8944 iPseU_CNN:0;iRNA_PseU:0 8945 chr4 56765989 56765989 1 + A G UCEC 56765988 + 56765968 56766008 41 AAAAAGAAGCCAAACAAAAATACACAGATCACCTTCAGTCT AAAAAGAAGCCAAACAAAAATGCACAGATCACCTTCAGTCT < 41bp 0.858138891176295 0.490823202006505 0.23512825 0.21603864 prediction 0.716277782352591 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56765988 chr4:56765989 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3528 0 0 1 0 1 Cytosol 0.440156039612882 0.441975952325857 0 0 hPsi_site_8945 iPseU_CNN:0;iRNA_PseU:0 8946 chr1 163325198 163325198 1 + A G LIHC 163325197 + 163325177 163325217 41 AAAAGGCAGCAGAGGACTCCTATGCTAAGATAGATGAGAAG AAAAGGCAGCAGAGGACTCCTGTGCTAAGATAGATGAGAAG < 41bp 0.858117976685773 0.496747208717129 0.21542355 0.15764028 prediction 0.716235953371547 Functional Loss - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163325197 chr1:163325198 nonsynonymous SNV 0.070 0 22 hPsi_associated_SNPs_3529 0 0 1 0 1 Cytosol 0.438718374746653 0.438718590412872 0 0 hPsi_site_8946 iPseU_CNN:0;iRNA_PseU:0 8947 chr5 2752865 2752865 1 + A G COAD 2752864 + 2752844 2752884 41 GCCGCCGGTGCAGTGGGCATTACAGGTAGCTCAGGTGACGC GCCGCCGGTGCAGTGGGCATTGCAGGTAGCTCAGGTGACGC < 41bp 0.862753268656659 0.50465011285855 0.48522213 0.27668273 prediction 0.716206311596219 Functional Loss - C5orf38 ENSG00000186493 CDS Human protein_coding chr5:2752864 chr5:2752865 synonymous SNV . 0 22 hPsi_associated_SNPs_3530 0 0 0 1 2 exosome 0.439011889155361 0.438939574344723 0 0 hPsi_site_8947 iPseU_CNN:0;iRNA_PseU:0 8948 chr12 57911081 57911081 1 + T C STAD 57911082 - 57911062 57911102 41 TCTTCAGATGAAAATGGGGGTACCTATGTTTCACCTCCTGG TCTTCAGATGAAAATGGGGGTGCCTATGTTTCACCTCCTGG < 41bp 0.877958774465545 0.519875054654918 0.7329295 0.2770946 prediction 0.716167439621254 Functional Loss - DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911082 chr12:57911081 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_3531 0 0 1 0 1 Cytosol 0.438715737928073 0.438711052741509 0.465859 0 hPsi_site_8948 iPseU_CNN:0.465859;iRNA_PseU:0 8949 chr12 51442870 51442870 1 + A G UCEC 51442869 + 51442849 51442889 41 ATGTGAAGAACTTGATGTCTTATGTGGTAACCAAGACAAAA ATGTGAAGAACTTGATGTCTTGTGTGGTAACCAAGACAAAA < 41bp 0.875632208835346 0.51757375532448 0.62938225 0.32398343 prediction 0.716116907021732 Functional Loss - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51442869 chr12:51442870 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_3532 0 0 1 1 2 chromatin 0.43870684749468 0.438715798089542 0.2587645 0 hPsi_site_8949 iPseU_CNN:0.2587645;iRNA_PseU:0 8950 chr13 25671714 25671714 1 + A G rs61739066 25671713 + 25671693 25671733 41 CCTAGAGTACCATTTAGTACTATGAGACCAGCTTCTTCACA CCTAGAGTACCATTTAGTACTGTGAGACCAGCTTCTTCACA < 41bp 0.865670982387166 0.507648348575277 0.7053983 0.5968931 prediction 0.716045267623778 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671713 chr13:25671714 nonsynonymous SNV 0.074 0 22 hPsi_associated_SNPs_3533 0 0 1 0 0 Cytosol 0.438718586732576 0.438718562857714 0.2170104 0 hPsi_site_8950 iPseU_CNN:0.2170104;iRNA_PseU:0 8951 chr22 21363902 21363902 1 + A G COAD 21363901 + 21363881 21363921 41 AAGCAGAGAAAAGCAGACAATACAGATCTATGCACAAATCA AAGCAGAGAAAAGCAGACAATGCAGATCTATGCACAAATCA < 41bp 0.858021721527412 0.492283757769601 0.7145849 0.3543686 prediction 0.716043443054825 Functional Loss - THAP7-AS1 ENSG00000230513 ncRNA_exonic Human antisense chr22:21363901 chr22:21363902 . . 0 22 hPsi_associated_SNPs_3534 0 0 0 1 0 unknown 0.438718087476519 0.438712930864561 0.4291698 0 hPsi_site_8951 iPseU_CNN:0.4291698;iRNA_PseU:0 8952 chr9 125797042 125797042 1 + A G rs144345942 125797041 + 125797021 125797061 41 TGAACCATCACACTACAAGTTATTTTATCCAGACTATGGCA TGAACCATCACACTACAAGTTGTTTTATCCAGACTATGGCA < 41bp 0.858020451069257 0.492917363601595 0.6913279 0.3249867 prediction 0.716040902138513 Functional Loss - GPR21 ENSG00000188394 CDS Human protein_coding chr9:125797041 chr9:125797042 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3535 0 0 0 1 0 exosome 0.438712581178776 0.43855180668295 0.3826558 0 hPsi_site_8952 iPseU_CNN:0.3826558;iRNA_PseU:0 8953 chr6 28269238 28269238 1 + A G COAD 28269237 + 28269217 28269257 41 TGAATAAAAATTTCCTCTTGTATGCTCCCCTGGAAGAATAC TGAATAAAAATTTCCTCTTGTGTGCTCCCCTGGAAGAATAC < 41bp 0.867412019624034 0.50942751256556 0.2764501 0.2791915 prediction 0.715969014116947 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28269237 chr6:28269238 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3536 0 0 1 0 0 nucleoplasm 0.438718592893753 0.438718592475509 0 0 hPsi_site_8953 iPseU_CNN:0;iRNA_PseU:0 8954 chr9 37776386 37776386 1 + A G COAD 37776385 + 37776365 37776405 41 GAAAAACTATCATTCAGAGATACTGGCCATCAATCAAGGTA GAAAAACTATCATTCAGAGATGCTGGCCATCAATCAAGGTA < 41bp 0.867109136687672 0.509147346105788 0.30697668 0.21339482 prediction 0.715923581163767 Functional Loss - TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37776385 chr9:37776386 nonsynonymous SNV 0.985 2 22 hPsi_associated_SNPs_3537 0 0 1 0 1 chromatin 0.438719557845574 0.438718362776771 0 0 hPsi_site_8954 iPseU_CNN:0;iRNA_PseU:0 8955 chr17 81043036 81043036 1 + A G HNSC 81043035 + 81043015 81043055 41 TGGAGAACTGAGACTGCTGGTACCAGACGGGGACGGCAGGC TGGAGAACTGAGACTGCTGGTGCCAGACGGGGACGGCAGGC < 41bp 0.872291615294065 0.51437321278951 0.7410575 0.2842505 prediction 0.71583680500911 Functional Loss - METRNL ENSG00000176845 CDS Human protein_coding chr17:81043035 chr17:81043036 synonymous SNV . 0 22 hPsi_associated_SNPs_3538 0 0 1 0 0 Ribosome 0.438765453596564 0.438867031142985 0.482115 0 hPsi_site_8955 iPseU_CNN:0.482115;iRNA_PseU:0 8956 chr6 64422420 64422420 1 + A G LUAD 64422419 + 64422399 64422439 41 ACAGCGAGGTCTCCACAGTTTATCAACCTGAAAAGGGATCC ACAGCGAGGTCTCCACAGTTTGTCAACCTGAAAAGGGATCC < 41bp 0.85785207025686 0.482796466983269 0.38743317 0.2543177 prediction 0.715704140513719 Functional Loss - PHF3 ENSG00000118482 CDS Human protein_coding chr6:64422419 chr6:64422420 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_3539 0 0 1 0 0 Cytosol 0.438713388687722 0.438713865496626 0 0 hPsi_site_8956 iPseU_CNN:0;iRNA_PseU:0 8957 chr16 84695280 84695280 1 + A G rs17755815 84695279 + 84695259 84695299 41 CCCCTACCGCAAGAACCTGCTATGCTACGACCACCGGACAG CCCCTACCGCAAGAACCTGCTGTGCTACGACCACCGGACAG < 41bp 0.879125431875893 0.521281568945828 0.58279717 0.3159439 prediction 0.715687725860131 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695279 chr16:84695280 synonymous SNV . 0 22 hPsi_associated_SNPs_3540 0 0 1 0 1 chromatin 0.438719785596972 0.438737934496034 0.16559434 0 hPsi_site_8957 iPseU_CNN:0.16559434;iRNA_PseU:0 8958 chr5 174156425 174156425 1 + A G rs577629417 174156424 + 174156404 174156444 41 CTGAAAATGGCTGCAAAACCTATGCTGCCCTCCAGCTTCAG CTGAAAATGGCTGCAAAACCTGTGCTGCCCTCCAGCTTCAG < 41bp 0.857752961743648 0.493768418784519 0.38100588 0.3906949 prediction 0.715505923487295 Functional Loss - MSX2 ENSG00000120149 CDS Human protein_coding chr5:174156424 chr5:174156425 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_3541 0 0 1 0 0 exosome 0.438718583153307 0.438718367095017 0 0 hPsi_site_8958 iPseU_CNN:0;iRNA_PseU:0 8959 chr6 149340328 149340328 1 + A G LGG 149340327 + 149340307 149340347 41 CGAGTGCTCCAACCCCAGGTTATTTTACATCATTCCGTACT CGAGTGCTCCAACCCCAGGTTGTTTTACATCATTCCGTACT < 41bp 0.857728265971403 0.482030146770224 0.5269289 0.25081405 prediction 0.715456531942806 Functional Loss - UST ENSG00000111962 CDS Human protein_coding chr6:149340327 chr6:149340328 synonymous SNV . 0 22 hPsi_associated_SNPs_3542 0 0 0 0 2 nucleus 0.438717851928648 0.438718217620912 0.0538578000000001 0 hPsi_site_8959 iPseU_CNN:0.0538578000000001;iRNA_PseU:0 8960 chr14 24771450 24771450 1 + A G DLBC 24771449 + 24771429 24771469 41 TGTCCCTAGTCCCCTACTGCTATTTCTCCGAGATCAGACGA TGTCCCTAGTCCCCTACTGCTGTTTCTCCGAGATCAGACGA < 41bp 0.884212646072239 0.526489330593491 0.33686176 0.2615422 prediction 0.715446630957495 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24771449 chr14:24771450 synonymous SNV . 0 22 hPsi_associated_SNPs_3543 0 0 1 0 1 Nucleus 0.438718546039027 0.438718744829238 0 0 hPsi_site_8960 iPseU_CNN:0;iRNA_PseU:0 8961 chr2 71376544 71376544 1 + A G LIHC 71376543 + 71376523 71376563 41 AACAGTAGCTTCGGAGAAGTTAAAACAGCTGACCAAAACTG AACAGTAGCTTCGGAGAAGTTGAAACAGCTGACCAAAACTG < 41bp 0.857715931823518 0.49647716417634 0.4678039 0.35643673 prediction 0.715431863647037 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71376543 chr2:71376544 synonymous SNV . 0 22 hPsi_associated_SNPs_3544 0 0 1 0 1 Cytosol 0.438470243949447 0.439159418531818 0 0 hPsi_site_8961 iPseU_CNN:0;iRNA_PseU:0 8962 chr9 71679937 71679937 1 + A G rs543209710 71679936 + 71679916 71679956 41 GCCAAACAAGCAAATCTGGCTATCTTCTCCATCCAGGTATG GCCAAACAAGCAAATCTGGCTGTCTTCTCCATCCAGGTATG < 41bp 0.857704281492416 0.485353573284359 0.37485608 0.32657617 prediction 0.715408562984832 Functional Loss - FXN ENSG00000165060 CDS Human protein_coding chr9:71679936 chr9:71679937 synonymous SNV . 0 22 hPsi_associated_SNPs_3545 0 0 1 0 2 Cytosol 0.438821358879059 0.438831828069207 0 0 hPsi_site_8962 iPseU_CNN:0;iRNA_PseU:0 8963 chr9 131454184 131454184 1 + A G LUAD 131454183 + 131454163 131454203 41 TTTTGAAAGTAGAACAGAAATATAACAAACTCCGCCAACCA TTTTGAAAGTAGAACAGAAATGTAACAAACTCCGCCAACCA < 41bp 0.870116707875707 0.512413946211998 0.4537959 0.5196528 prediction 0.715405523327419 Functional Loss - SET ENSG00000119335 CDS Human protein_coding chr9:131454183 chr9:131454184 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3546 0 0 0 0 2 Ribosome 0.438662165365078 0.438659096779133 0 0 hPsi_site_8963 iPseU_CNN:0;iRNA_PseU:0 8964 chr17 72436413 72436413 1 + A G UCEC 72436412 + 72436392 72436432 41 GGCTCTGCTGCTGACCCTGGTAGAGGTCATCATCAATACAG GGCTCTGCTGCTGACCCTGGTGGAGGTCATCATCAATACAG < 41bp 0.857693100370306 0.469692054321124 0.61255646 0.27285832 prediction 0.715386200740612 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436412 chr17:72436413 synonymous SNV . 0 22 hPsi_associated_SNPs_3547 0 0 0 0 0 nucleus 0.438718548506611 0.438720445793755 0.22511292 0 hPsi_site_8964 iPseU_CNN:0.22511292;iRNA_PseU:0 8965 chr17 52991164 52991164 1 + A G UCEC 52991163 + 52991143 52991183 41 TAAGCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAA TAAGCGAAGTCAAAGAAGTATGCCTCGACCTGGTTAAGAAA < 41bp 0.857626734392045 0.484638768772198 0.80207306 0.3573966 prediction 0.715253468784091 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52991163 chr17:52991164 nonsynonymous SNV 0.979 4 22 hPsi_associated_SNPs_3548 0 0 1 2 1 Cytosol 0.438718592995105 0.438718592995115 0.60414612 0 hPsi_site_8965 iPseU_CNN:0.60414612;iRNA_PseU:0 8966 chr10 43882324 43882324 1 + T C STAD 43882325 - 43882305 43882345 41 GAAGCAGATGTTGAGTTTGCTACTCATGAAGAAGCTGTGGC GAAGCAGATGTTGAGTTTGCTGCTCATGAAGAAGCTGTGGC < 41bp 0.880473294702156 0.522871385342453 0.34055656 0.26355213 prediction 0.715203818719407 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882325 chr10:43882324 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3549 0 0 1 0 0 Cytosol 0.440218988759708 0.415603877724891 0 0 hPsi_site_8966 iPseU_CNN:0;iRNA_PseU:0 8967 chr6 142519691 142519691 1 + A G UCEC 142519690 + 142519670 142519710 41 ATCAGGCAACTATACTGGAATACAGATTCCTCCGGGTGCAC ATCAGGCAACTATACTGGAATGCAGATTCCTCCGGGTGCAC < 41bp 0.874633501279786 0.517034526471287 0.6614921 0.31062385 prediction 0.715197949616999 Functional Loss - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519690 chr6:142519691 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_3550 0 0 1 0 1 Ribosome 0.438721115906244 0.438719104839107 0.3229842 0 hPsi_site_8967 iPseU_CNN:0.3229842;iRNA_PseU:0 8968 chr21 44329049 44329049 1 + A G UCEC 44329048 + 44329028 44329068 41 AGCATCATGACTACAGCACGTACACCTTCTTAGACCTCAAC AGCATCATGACTACAGCACGTGCACCTTCTTAGACCTCAAC < 41bp 0.872136698621189 0.514566857225944 0.75250566 0.3369553 prediction 0.71513968279049 Functional Loss - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44329048 chr21:44329049 nonsynonymous SNV 0.777 3 22 hPsi_associated_SNPs_3551 0 0 1 0 1 Nucleus 0.434163933567616 0.412658057199814 0.50501132 0 hPsi_site_8968 iPseU_CNN:0.50501132;iRNA_PseU:0 8969 chr1 12918971 12918971 1 + A G CESC 12918970 + 12918950 12918990 41 AGGAGCTGCCCAGGGTGCTCTATCTCCCACTCTTCAGGGAG AGGAGCTGCCCAGGGTGCTCTGTCTCCCACTCTTCAGGGAG < 41bp 0.883350222125259 0.525787352121767 0.6469806 0.40300983 prediction 0.715125740006985 Functional Loss - PRAMEF2 ENSG00000120952 CDS Human protein_coding chr1:12918970 chr1:12918971 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_3552 0 0 0 0 0 unknown 0.438718607772732 0.438718596601628 0.2939612 0 hPsi_site_8969 iPseU_CNN:0.2939612;iRNA_PseU:0 8970 chr3 51746528 51746528 1 + A G SKCM 51746527 + 51746507 51746547 41 CTATTTCAGATCCCACAGATTAGCTACGCCTCTACCAGTGC CTATTTCAGATCCCACAGATTGGCTACGCCTCTACCAGTGC < 41bp 0.876621255956759 0.519098487216917 0.40006027 0.23055735 prediction 0.715045537479685 Functional Loss - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51746527 chr3:51746528 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_3553 0 0 0 0 1 Endoplasmic reticulum 0.412842237622005 0.438785574227225 0 0 hPsi_site_8970 iPseU_CNN:0;iRNA_PseU:0 8971 chr15 42585062 42585062 1 + A G rs75876980 42585061 + 42585041 42585081 41 AGAAGAGGTTGTGATTAGCATAAATTCCCTGGGCCAATTAT AGAAGAGGTTGTGATTAGCATGAATTCCCTGGGCCAATTAT < 41bp 0.860535841205781 0.503052323143894 0.35049045 0.32559866 prediction 0.714967036123774 Functional Loss - GANC ENSG00000214013 CDS Human protein_coding chr15:42585061 chr15:42585062 nonsynonymous SNV 0.960 1 22 hPsi_associated_SNPs_3554 0 0 0 0 1 chromatin 0.438718592995106 0.438718593066298 0 0 hPsi_site_8971 iPseU_CNN:0;iRNA_PseU:0 8972 chr4 148555436 148555436 1 + A G GBM 148555435 + 148555415 148555455 41 GCAATTTCCATTGCTTCTTCTATGCCACCTTCACCCATGGG GCAATTTCCATTGCTTCTTCTGTGCCACCTTCACCCATGGG < 41bp 0.857422850485424 0.482792838529301 0.26211482 0.2156794 prediction 0.714845700970848 Functional Loss - TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148555435 chr4:148555436 nonsynonymous SNV 0.313 0 22 hPsi_associated_SNPs_3555 0 0 1 0 0 Nucleus 0.438718400129772 0.438715465999384 0 0 hPsi_site_8972 iPseU_CNN:0;iRNA_PseU:0 8973 chrX 118109238 118109238 1 + A G CESC 118109237 + 118109217 118109257 41 CCGGAAATGTCATGGGTTTCTATCAGACCCCGTGTCCTTGT CCGGAAATGTCATGGGTTTCTGTCAGACCCCGTGTCCTTGT < 41bp 0.866570593067553 0.509155485805225 0.8233304 0.68332124 prediction 0.714830214524656 Functional Loss - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118109237 chrX:118109238 synonymous SNV . 0 22 hPsi_associated_SNPs_3556 0 0 1 0 0 chromatin 0.438673310222576 0.438135764975485 0.28001832 0 hPsi_site_8973 iPseU_CNN:0.28001832;iRNA_PseU:0 8974 chr1 35223551 35223551 1 + A G BLCA 35223550 + 35223530 35223570 41 TCAACCTCGTGGAGCTCATCTACCTGGTGAGCAAGAGATGC TCAACCTCGTGGAGCTCATCTGCCTGGTGAGCAAGAGATGC < 41bp 0.857408245746873 0.468350964026013 0.61856943 0.2508623 prediction 0.714816491493747 Functional Loss - GJB5 ENSG00000189280 CDS Human protein_coding chr1:35223550 chr1:35223551 nonsynonymous SNV 0.830 5 22 hPsi_associated_SNPs_3557 0 0 0 0 0 Ribosome 0.440905811714887 0.438780996672557 0.23713886 0 hPsi_site_8974 iPseU_CNN:0.23713886;iRNA_PseU:0 8975 chr19 57883181 57883181 1 + A G LUAD 57883180 + 57883160 57883200 41 TTTTTGAAGACGTGGCCATATATTTCTCCCAGGAGGAGTGG TTTTTGAAGACGTGGCCATATGTTTCTCCCAGGAGGAGTGG < 41bp 0.857401961629028 0.482613169803584 0.42628247 0.30932063 prediction 0.714803923258055 Functional Loss - ZNF547 ENSG00000152433;ENSG00000268133 CDS Human other chr19:57883180 chr19:57883181 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_3558 0 0 1 0 1 exosome 0.438713081743218 0.438715355907051 0 0 hPsi_site_8975 iPseU_CNN:0;iRNA_PseU:0 8976 chr2 220290711 220290711 1 + A G LUSC 220290710 + 220290690 220290730 41 AGCAGCAGCATGAAGTGCTCTAAAGACAGAGACCCTCTGCC AGCAGCAGCATGAAGTGCTCTGAAGACAGAGACCCTCTGCC < 41bp 0.85739110469054 0.497956963727843 0.7889275 0.54994637 prediction 0.714782209381079 Functional Loss - DES ENSG00000175084 CDS Human protein_coding chr2:220290710 chr2:220290711 synonymous SNV . 0 22 hPsi_associated_SNPs_3559 0 0 0 0 1 nucleus 0.438719453469302 0.438812042915029 0.47796226 0 hPsi_site_8976 iPseU_CNN:0.47796226;iRNA_PseU:0 8977 chr7 30963464 30963464 1 + A G rs373552348 30963463 + 30963443 30963483 41 GCTTCCTGGGGACCAAGATTTACCAATTCACCCACTCCCTT GCTTCCTGGGGACCAAGATTTGCCAATTCACCCACTCCCTT < 41bp 0.857384611302026 0.498677888578966 0.33170646 0.27758998 prediction 0.714769222604053 Functional Loss - AQP1 ENSG00000240583 UTR3 Human protein_coding chr7:30963463 chr7:30963464 . . 0 22 hPsi_associated_SNPs_3560 0 0 0 0 0 Endoplasmic reticulum 0.438718594547606 0.438718592995059 0 0 hPsi_site_8977 iPseU_CNN:0;iRNA_PseU:0 8978 chr5 147782066 147782066 1 + A G LUAD 147782065 + 147782045 147782085 41 AGGAGCCAAAATTCAAACTTTACATTTAGTTGGTGAGTACA AGGAGCCAAAATTCAAACTTTGCATTTAGTTGGTGAGTACA < 41bp 0.857366679416371 0.48987770383994 0.21273306 0.14985204 prediction 0.714733358832741 Functional Loss - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147782065 chr5:147782066 synonymous SNV . 0 22 hPsi_associated_SNPs_3561 0 0 1 0 1 Ribosome 0.438718506120936 0.438718783315794 0 0 hPsi_site_8978 iPseU_CNN:0;iRNA_PseU:0 8979 chr16 81053790 81053790 1 + A G GBM 81053789 + 81053769 81053809 41 AGTACACAAAGCCAAACCAGTACAAACCTACCTACGTGGTG AGTACACAAAGCCAAACCAGTGCAAACCTACCTACGTGGTG < 41bp 0.888636534436587 0.531276388397773 0.9518849 0.8241149 prediction 0.714720292077628 Functional Loss - CENPN ENSG00000166451 CDS Human protein_coding chr16:81053789 chr16:81053790 nonsynonymous SNV 0.975 4 22 hPsi_associated_SNPs_3562 0 0 1 0 2 Ribosome 0.438716937421685 0.438718103132296 0.25554 0 hPsi_site_8979 iPseU_CNN:0.25554;iRNA_PseU:0 8980 chr17 7324902 7324902 1 + A G STAD 7324901 + 7324881 7324921 41 AGACAAGCAAGAATTGGGTGTACCGTTCCCTAACTGGGAGG AGACAAGCAAGAATTGGGTGTGCCGTTCCCTAACTGGGAGG < 41bp 0.857334677170504 0.492117734449353 0.67554134 0.25248927 prediction 0.714669354341009 Functional Loss - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324901 chr17:7324902 nonsynonymous SNV 0.825 4 22 hPsi_associated_SNPs_3563 0 0 1 0 0 exosome 0.439323416576717 0.439626498866873 0.35108268 0 hPsi_site_8980 iPseU_CNN:0.35108268;iRNA_PseU:0 8981 chr3 119306567 119306567 1 + A G LUSC 119306566 + 119306546 119306586 41 CATGGTGGAGACAGTGATTCTACAGCTGCCATTGCTGGCTG CATGGTGGAGACAGTGATTCTGCAGCTGCCATTGCTGGCTG < 41bp 0.882699560551674 0.525389470174754 0.24555907 0.1886966 prediction 0.714620180753839 Functional Loss - ADPRH ENSG00000144843 CDS Human protein_coding chr3:119306566 chr3:119306567 nonsynonymous SNV 0.926 4 22 hPsi_associated_SNPs_3564 0 0 0 0 0 exosome 0.429216222840221 0.429663390133709 0 0 hPsi_site_8981 iPseU_CNN:0;iRNA_PseU:0 8982 chr1 226026987 226026987 1 + A G SARC 226026986 + 226026966 226027006 41 GGCTGGGCTTCCAGGAATTCTACATTCAAGGAGGGGACTGG GGCTGGGCTTCCAGGAATTCTGCATTCAAGGAGGGGACTGG < 41bp 0.890251888545879 0.532954983066217 0.2376641 0.19826633 prediction 0.714593810959324 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026986 chr1:226026987 nonsynonymous SNV 0.920 4 22 hPsi_associated_SNPs_3565 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0 0 hPsi_site_8982 iPseU_CNN:0;iRNA_PseU:0 8983 chr2 234171812 234171812 1 + A G rs13011156 234171811 + 234171791 234171831 41 CACATGGAATGACAATCAGCTACAAGAAATGGCCCAACTGA CACATGGAATGACAATCAGCTGCAAGAAATGGCCCAACTGA < 41bp 0.877878585237791 0.520595455764718 0.811816 0.35018963 prediction 0.714566258946146 Functional Loss - ATG16L1 ENSG00000085978 CDS Human protein_coding chr2:234171811 chr2:234171812 synonymous SNV . 0 22 hPsi_associated_SNPs_3566 0 0 1 0 2 Ribosome 0.440062471947253 0.438807315583848 0.623632 0 hPsi_site_8983 iPseU_CNN:0.623632;iRNA_PseU:0 8984 chr1 55272743 55272743 1 + A G rs115158797 55272742 + 55272722 55272762 41 AGGCCCCATACTCCACGCGTTATTCTACCCAAGTGGTGAGT AGGCCCCATACTCCACGCGTTGTTCTACCCAAGTGGTGAGT < 41bp 0.875586088724862 0.518374243769877 0.80689514 0.414665 prediction 0.714423689909969 Functional Loss - LEXM ENSG00000162398 CDS Human protein_coding chr1:55272742 chr1:55272743 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_3567 0 0 0 0 2 exosome 0.438718612868479 0.438717980839045 0.61379028 0 hPsi_site_8984 iPseU_CNN:0.61379028;iRNA_PseU:0 8985 chr19 42799006 42799006 1 + A G PAAD 42799005 + 42798985 42799025 41 CAGCCGCCTTCCAGGCCCGCTATGCAGACATCTTTCCCTCC CAGCCGCCTTCCAGGCCCGCTGTGCAGACATCTTTCCCTCC < 41bp 0.857192440888679 0.481252176362472 0.64931625 0.39492318 prediction 0.714384881777357 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42799005 chr19:42799006 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_3568 0 0 1 0 1 Cytosol 0.438718592809841 0.438718594428134 0.2986325 0 hPsi_site_8985 iPseU_CNN:0.2986325;iRNA_PseU:0 8986 chr16 1251886 1251886 1 + A G rs199914911 1251885 + 1251865 1251905 41 AGCGGCGCAGCTTGCGCCTCTACGCCCGCTGGCAGAGCCGC AGCGGCGCAGCTTGCGCCTCTGCGCCCGCTGGCAGAGCCGC < 41bp 0.85718296461794 0.471311075740852 0.5212406 0.3193791 prediction 0.71436592923588 Functional Loss - CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1251885 chr16:1251886 nonsynonymous SNV 0.717 4 22 hPsi_associated_SNPs_3569 0 0 0 0 0 nucleolus 0.438720842608188 0.438731719167996 0.0424812000000001 0 hPsi_site_8986 iPseU_CNN:0.0424812000000001;iRNA_PseU:0 8987 chr11 247361 247361 1 + A G UCEC 247360 + 247340 247380 41 CGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGG CGTTTCTATGATCTCTCCAGTGAATACTATCAAACAATCGG < 41bp 0.857175408804796 0.468146524531477 0.22579747 0.22729471 prediction 0.714350817609593 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:247360 chr11:247361 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3570 0 0 1 0 2 Ribosome 0.438718592720239 0.438718592492164 0 0 hPsi_site_8987 iPseU_CNN:0;iRNA_PseU:0 8988 chr18 48591855 48591855 1 + A G COAD 48591854 + 48591834 48591874 41 GTTCAGGTAGGAGAGACATTTAAGGTTCCTTCAAGCTGCCC GTTCAGGTAGGAGAGACATTTGAGGTTCCTTCAAGCTGCCC < 41bp 0.857164142843945 0.47492566338012 0.35095835 0.2702967 prediction 0.71432828568789 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48591854 chr18:48591855 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3571 0 0 1 0 1 Cytosol 0.438718592995067 0.438721803737083 0 0 hPsi_site_8988 iPseU_CNN:0;iRNA_PseU:0 8989 chr5 7892933 7892933 1 + A G rs35890938 7892932 + 7892912 7892952 41 AGAGGTTCTGCGGAAGGGAGTATGTACAGGCTGGCTGGCCT AGAGGTTCTGCGGAAGGGAGTGTGTACAGGCTGGCTGGCCT < 41bp 0.878483916763404 0.521336343024514 0.31203526 0.2754178 prediction 0.714295147477779 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7892932 chr5:7892933 synonymous SNV . 0 22 hPsi_associated_SNPs_3572 1 0 1 1 2 Nucleus 0.439565247924088 0.438431024439366 0 0 hPsi_site_8989 iPseU_CNN:0;iRNA_PseU:0 8990 chr22 20132858 20132858 1 + A G rs141313779 20132857 + 20132837 20132877 41 CCAGGGCCCTCTGCCAGCCCTACACGGCACACGCTGGTTAA CCAGGGCCCTCTGCCAGCCCTGCACGGCACACGCTGGTTAA < 41bp 0.857145863947811 0.492107038743455 0.806859 0.30981565 prediction 0.714291727895622 Functional Loss - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20132857 chr22:20132858 nonsynonymous SNV 0.137 0 22 hPsi_associated_SNPs_3573 0 0 1 0 0 Endoplasmic reticulum 0.438729743065148 0.438718404220189 0.613718 0 hPsi_site_8990 iPseU_CNN:0.613718;iRNA_PseU:0 8991 chr15 34520681 34520681 1 + A G THCA 34520680 + 34520660 34520700 41 AGTTTCTTCAGGGTTTGGTCTATCTCATTGGGAACCTGATG AGTTTCTTCAGGGTTTGGTCTGTCTCATTGGGAACCTGATG < 41bp 0.860477920360232 0.503339910567345 0.5376946 0.3166371 prediction 0.714276019585773 Functional Loss - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520680 chr15:34520681 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_3574 0 0 1 0 1 Ribosome 0.438718583840039 0.438718593652352 0.0753892 0 hPsi_site_8991 iPseU_CNN:0.0753892;iRNA_PseU:0 8992 chr1 33956991 33956991 1 + A G LUAD 33956990 + 33956970 33957010 41 GGACACTGGAGCAATGTCGCTATAGGGTCAAAAACCTCCTA GGACACTGGAGCAATGTCGCTGTAGGGTCAAAAACCTCCTA < 41bp 0.857103669776366 0.462000921165311 0.38963193 0.40336373 prediction 0.714207339552732 Functional Loss - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33956990 chr1:33956991 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_3575 0 0 0 0 0 exosome 0.438718589207249 0.438718463195833 0 0 hPsi_site_8992 iPseU_CNN:0;iRNA_PseU:0 8993 chr7 127892124 127892124 1 + A G rs148407750 127892123 + 127892103 127892143 41 GGCTTTGGCCCTATCTTTTCTATGTCCAAGCTGTGCCCATC GGCTTTGGCCCTATCTTTTCTGTGTCCAAGCTGTGCCCATC < 41bp 0.857085645351598 0.463798276647111 0.4094359 0.3375858 prediction 0.714171290703197 Functional Loss - LEP ENSG00000174697 CDS Human protein_coding chr7:127892123 chr7:127892124 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_3576 0 0 0 0 1 exosome 0.438718583051456 0.438718829535141 0 0 hPsi_site_8993 iPseU_CNN:0;iRNA_PseU:0 8994 chr1 179887056 179887056 1 + A G UCEC 179887055 + 179887035 179887075 41 TGGCCAGAATGCAGCTGTGGTACACCGCTTTGAGTCATTTC TGGCCAGAATGCAGCTGTGGTGCACCGCTTTGAGTCATTTC < 41bp 0.873339996008105 0.51627844039708 0.3853351 0.28476846 prediction 0.71412311122205 Functional Loss - TOR1AIP1 ENSG00000143337 CDS Human protein_coding chr1:179887055 chr1:179887056 synonymous SNV . 0 22 hPsi_associated_SNPs_3577 0 0 1 0 0 Endoplasmic reticulum 0.438663225888171 0.438710369464623 0 0 hPsi_site_8994 iPseU_CNN:0;iRNA_PseU:0 8995 chr11 6942680 6942680 1 + A G LUAD 6942679 + 6942659 6942699 41 TGCAAGCCCCTGTACTACTCTACCATCATGACACAACGGGT TGCAAGCCCCTGTACTACTCTGCCATCATGACACAACGGGT < 41bp 0.873972778665251 0.516951155786693 0.25862694 0.19993427 prediction 0.714043245757115 Functional Loss - OR2D3 ENSG00000178358 CDS Human protein_coding chr11:6942679 chr11:6942680 nonsynonymous SNV 0.889 0 22 hPsi_associated_SNPs_3578 0 0 0 0 0 unknown 0.438718975999614 0.438718578445726 0 0 hPsi_site_8995 iPseU_CNN:0;iRNA_PseU:0 8996 chr18 59894681 59894681 1 + A G PRAD 59894680 + 59894660 59894700 41 TTAGAGGCCCTTACACCAATTATAAGCAACCTTCCTCCAAC TTAGAGGCCCTTACACCAATTGTAAGCAACCTTCCTCCAAC < 41bp 0.882386431577258 0.52538064690021 0.6409651 0.34456766 prediction 0.714011569354096 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59894680 chr18:59894681 nonsynonymous SNV 0.738 0 22 hPsi_associated_SNPs_3579 0 0 1 0 1 Cytosol 0.438718680336057 0.43871860787739 0.2819302 0 hPsi_site_8996 iPseU_CNN:0.2819302;iRNA_PseU:0 8997 chr20 61444915 61444915 1 + A G rs142129737 61444914 + 61444894 61444934 41 GGCCCCAGCCCGGCAGGACCTACAAGGGATGAGCCAGCCAA GGCCCCAGCCCGGCAGGACCTGCAAGGGATGAGCCAGCCAA < 41bp 0.860807458510973 0.503907712895252 0.54803014 0.50146395 prediction 0.713799491231442 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61444914 chr20:61444915 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3580 0 0 0 0 0 Ribosome 0.438718467345104 0.4387173048245 0.0931323800000001 0 hPsi_site_8997 iPseU_CNN:0.0931323800000001;iRNA_PseU:0 8998 chr17 32964701 32964701 1 + A G STAD 32964700 + 32964680 32964720 41 CAGACCTGGAGATCGGCATGTACGCGCTGCTGGGCGTCTTC CAGACCTGGAGATCGGCATGTGCGCGCTGCTGGGCGTCTTC < 41bp 0.88270150965356 0.525822281309095 0.5725193 0.2042197 prediction 0.71375845668893 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32964700 chr17:32964701 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3581 0 0 0 0 0 exosome 0.438857143718444 0.438823894233763 0.1450386 0 hPsi_site_8998 iPseU_CNN:0.1450386;iRNA_PseU:0 8999 chr20 34828491 34828491 1 + A G LUSC 34828490 + 34828470 34828510 41 AGCACAGCATGGACCTGAGCTATGCCCTGGAGACTGTGCTC AGCACAGCATGGACCTGAGCTGTGCCCTGGAGACTGTGCTC < 41bp 0.881156214479004 0.524284346934279 0.37940663 0.32911623 prediction 0.713743735089451 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828490 chr20:34828491 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3582 0 0 1 0 1 Ribosome 0.438350821374779 0.438501647377021 0 0 hPsi_site_8999 iPseU_CNN:0;iRNA_PseU:0 9000 chr11 71260017 71260017 1 + A G rs200171268 71260016 + 71259996 71260036 41 AGTGCAGCTGCTGCAAGCCCTACTGCTCCCAGTGCAGCTGC AGTGCAGCTGCTGCAAGCCCTGCTGCTCCCAGTGCAGCTGC < 41bp 0.866491418923052 0.509635709725837 0.36365083 0.22777718 prediction 0.713711418394429 Functional Loss - KRTAP5-9 ENSG00000254997 CDS Human protein_coding chr11:71260016 chr11:71260017 nonsynonymous SNV 0.056 0 22 hPsi_associated_SNPs_3583 0 0 0 0 0 exosome 0.438814106821739 0.438217722475277 0 0 hPsi_site_9000 iPseU_CNN:0;iRNA_PseU:0 9001 chr22 41566460 41566460 1 + A G HNSC 41566459 + 41566439 41566479 41 CACCAAGTGAGGGAGATGATTATATCTTCCATTGCCATCCT CACCAAGTGAGGGAGATGATTGTATCTTCCATTGCCATCCT < 41bp 0.878678038459584 0.521837466219442 0.3140322 0.4109309 prediction 0.713681144480285 Functional Loss - EP300 ENSG00000100393 CDS Human protein_coding chr22:41566459 chr22:41566460 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3584 0 0 1 0 1 Cytosol 0.437711705216442 0.438283794199103 0 0 hPsi_site_9001 iPseU_CNN:0;iRNA_PseU:0 9002 chr1 206319119 206319119 1 + A G rs57621203 206319118 + 206319098 206319138 41 CAGATGGAATACTTCGGCACTATCTCCATTGGCTCCCCACC CAGATGGAATACTTCGGCACTGTCTCCATTGGCTCCCCACC < 41bp 0.883872255897141 0.527058257703574 0.5521561 0.43117157 prediction 0.713627996387134 Functional Loss - CTSE ENSG00000196188 CDS Human protein_coding chr1:206319118 chr1:206319119 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_3585 0 0 0 0 2 Endoplasmic reticulum 0.439421972283196 0.440112434093245 0.1043122 0 hPsi_site_9002 iPseU_CNN:0.1043122;iRNA_PseU:0 9003 chr1 148756534 148756534 1 + A G rs587763243 148756533 + 148756513 148756553 41 TCAGTCAATGTACTTTGAACTACCTGACTCATTCCAGCACT TCAGTCAATGTACTTTGAACTGCCTGACTCATTCCAGCACT < 41bp 0.856805305877589 0.494989572810473 0.74426275 0.3244539 prediction 0.713610611755177 Functional Loss - NBPF25P ENSG00000203827 CDS Human other chr1:148756533 chr1:148756534 synonymous SNV . 0 22 hPsi_associated_SNPs_3586 0 0 0 0 1 unknown 0.438716548746438 0.438718593657816 0.4885255 0 hPsi_site_9003 iPseU_CNN:0.4885255;iRNA_PseU:0 9004 chr1 210024584 210024584 1 + A G THYM 210024583 + 210024563 210024603 41 GCATCAGGAACCTGATTTTCTATGAACTGCCGACATATCCA GCATCAGGAACCTGATTTTCTGTGAACTGCCGACATATCCA < 41bp 0.856795284117957 0.492575824428154 0.32056507 0.2793365 prediction 0.713590568235913 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210024583 chr1:210024584 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3587 0 0 1 0 1 Cytosol 0.438718592997216 0.438718592996614 0 0 hPsi_site_9004 iPseU_CNN:0;iRNA_PseU:0 9005 chr6 28234831 28234831 1 + A G rs16893887 28234830 + 28234810 28234850 41 TCAGCAGGCAGCACCCATGTTAGTCTCCTTCTGCGATGCCT TCAGCAGGCAGCACCCATGTTGGTCTCCTTCTGCGATGCCT < 41bp 0.870211575112821 0.513421440185639 0.790431 0.5588977 prediction 0.713580269854363 Functional Loss - ZSCAN26 ENSG00000197062 ncRNA_exonic Human protein_coding chr6:28234830 chr6:28234831 . . 0 22 hPsi_associated_SNPs_3588 0 0 0 0 0 Cytosol 0.438715690924885 0.438714495336538 0.4630666 0 hPsi_site_9005 iPseU_CNN:0.4630666;iRNA_PseU:0 9006 chr3 9426301 9426301 1 + A G STAD 9426300 + 9426280 9426320 41 GCAGTTTACGTTCTGATACGTACACCTCAAGCTTTTGTTCA GCAGTTTACGTTCTGATACGTGCACCTCAAGCTTTTGTTCA < 41bp 0.862101340178021 0.50531571669504 0.82510006 0.19386122 prediction 0.71357124696596 Functional Loss - THUMPD3 ENSG00000134077 CDS Human protein_coding chr3:9426300 chr3:9426301 nonsynonymous SNV 0.376 1 22 hPsi_associated_SNPs_3589 0 0 1 0 1 Cytosol 0.438719014768942 0.438718610540137 0.65020012 0 hPsi_site_9006 iPseU_CNN:0.65020012;iRNA_PseU:0 9007 chr20 48561952 48561952 1 + A G KIRC 48561951 + 48561931 48561971 41 AAGATCCGGTCCCACGTGGCTACTTGTTCCAAATACCAGAA AAGATCCGGTCCCACGTGGCTGCTTGTTCCAAATACCAGAA < 41bp 0.887193524601546 0.530415551566484 0.26921716 0.17888555 prediction 0.713555946070125 Functional Loss - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48561951 chr20:48561952 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_3590 0 0 1 0 2 Ribosome 0.438985124993362 0.438971518187382 0 0 hPsi_site_9007 iPseU_CNN:0;iRNA_PseU:0 9008 chr22 25627633 25627633 1 + A G UCEC 25627632 + 25627612 25627652 41 ACCTGCTGGAGAAGGGAGACTACAAGGACAGCAGCGACTTT ACCTGCTGGAGAAGGGAGACTGCAAGGACAGCAGCGACTTT < 41bp 0.856743360737107 0.48048882034513 0.366987 0.27021056 prediction 0.713486721474214 Functional Loss - CRYBB2 ENSG00000244752 CDS Human protein_coding chr22:25627632 chr22:25627633 nonsynonymous SNV 0.393 5 22 hPsi_associated_SNPs_3591 0 0 0 0 1 exosome 0.438716399377245 0.438718578503613 0 0 hPsi_site_9008 iPseU_CNN:0;iRNA_PseU:0 9009 chr16 83992895 83992895 1 + A G COAD 83992894 + 83992874 83992914 41 CCTCTGGTATCTGCCTGTCCTACCTGCTCTCCGGCTACACA CCTCTGGTATCTGCCTGTCCTGCCTGCTCTCCGGCTACACA < 41bp 0.856734536565068 0.476397746255079 0.776074 0.33100617 prediction 0.713469073130137 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83992894 chr16:83992895 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3592 0 0 1 0 1 chromatin 0.436122901425773 0.437583056436727 0.552148 0 hPsi_site_9009 iPseU_CNN:0.552148;iRNA_PseU:0 9010 chr12 46244445 46244445 1 + A G GBM 46244444 + 46244424 46244464 41 AGCCAGTCACAAGATACTGTTATCATAGCACCCCCACAGTA AGCCAGTCACAAGATACTGTTGTCATAGCACCCCCACAGTA < 41bp 0.873483873403306 0.516767754143701 0.5936899 0.5409932 prediction 0.71343223851921 Functional Loss - ARID2 ENSG00000189079 CDS Human protein_coding chr12:46244444 chr12:46244445 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3593 0 0 1 0 0 Nucleus 0.438718550681659 0.438718433923771 0.1053934 0 hPsi_site_9010 iPseU_CNN:0.1053934;iRNA_PseU:0 9011 chr1 27100848 27100848 1 + A G COAD 27100847 + 27100827 27100867 41 AGCGGCCAATGGATGGCACATATGGCCCTCCTGCCAAGCGG AGCGGCCAATGGATGGCACATGTGGCCCTCCTGCCAAGCGG < 41bp 0.875360166104552 0.51866196196077 0.19190931 0.18549538 prediction 0.713396408287564 Functional Loss - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27100847 chr1:27100848 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_3594 0 0 1 0 0 Nucleus 0.438709757197752 0.438701061101026 0 0 hPsi_site_9011 iPseU_CNN:0;iRNA_PseU:0 9012 chr12 48175093 48175093 1 + A G rs2525042 48175092 + 48175072 48175112 41 GGAAAGAGCCCCCAAACCTGTACCCATGCCCCTCCAGCCCT GGAAAGAGCCCCCAAACCTGTGCCCATGCCCCTCCAGCCCT < 41bp 0.856691323466836 0.494784536859309 0.6809554 0.2534423 prediction 0.713382646933672 Functional Loss - SLC48A1 ENSG00000211584 UTR3 Human protein_coding chr12:48175092 chr12:48175093 . . 0 22 hPsi_associated_SNPs_3595 0 0 1 0 0 Ribosome 0.438718592992312 0.438718592979045 0.3619108 0 hPsi_site_9012 iPseU_CNN:0.3619108;iRNA_PseU:0 9013 chr12 102559553 102559553 1 + A G LUSC 102559552 + 102559532 102559572 41 TAGAGCTTGGAGGGAAAGGATATGCACCACCACCATCAGAT TAGAGCTTGGAGGGAAAGGATGTGCACCACCACCATCAGAT < 41bp 0.856659436871843 0.490326839224688 0.44593692 0.26775956 prediction 0.713318873743686 Functional Loss - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102559552 chr12:102559553 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3596 0 0 1 0 1 chromatin 0.43871859816072 0.438718590798222 0 0 hPsi_site_9013 iPseU_CNN:0;iRNA_PseU:0 9014 chr17 18781153 18781153 1 + A G UCEC 18781152 + 18781132 18781172 41 AAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGAT AAAAGAGGCTCCATTGTCTCTGAATTGCTGGCTTCCATGAT < 41bp 0.883901902266333 0.527248203855703 0.32904717 0.22626692 prediction 0.71330739682126 Functional Loss - PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18781152 chr17:18781153 nonsynonymous SNV 0.987 5 22 hPsi_associated_SNPs_3597 0 0 1 0 1 Ribosome 0.438718607301703 0.438719418306898 0 0 hPsi_site_9014 iPseU_CNN:0;iRNA_PseU:0 9015 chr9 96857687 96857687 1 + A G rs143078046 96857686 + 96857666 96857706 41 GAAGGTGATGACATTTGCCTTACAGGAAGGAAAAGTAGCTA GAAGGTGATGACATTTGCCTTGCAGGAAGGAAAAGTAGCTA < 41bp 0.856650051044821 0.459878661222895 0.32687286 0.14093706 prediction 0.713300102089641 Functional Loss - PTPDC1 ENSG00000158079 CDS Human protein_coding chr9:96857686 chr9:96857687 synonymous SNV . 0 22 hPsi_associated_SNPs_3598 0 0 0 0 2 Nucleus 0.438766153158857 0.438721223537063 0 0 hPsi_site_9015 iPseU_CNN:0;iRNA_PseU:0 9016 chr19 55816900 55816900 1 + A G LUAD 55816899 + 55816879 55816919 41 AGAACAAATATTCCTCGTGCTAAAGGACAAACCTCTCAGCA AGAACAAATATTCCTCGTGCTGAAGGACAAACCTCTCAGCA < 41bp 0.856645317155119 0.478614833658423 0.6761703 0.3158096 prediction 0.713290634310238 Functional Loss - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55816899 chr19:55816900 synonymous SNV . 0 22 hPsi_associated_SNPs_3599 0 0 1 0 2 chromatin 0.438712977170629 0.43868911750537 0.3523406 0 hPsi_site_9016 iPseU_CNN:0.3523406;iRNA_PseU:0 9017 chr2 79255380 79255380 1 + A G UCEC 79255379 + 79255359 79255399 41 ACTGTGATGCAAAGTTACCCTATGTCTGCAAGTTCAAGGAC ACTGTGATGCAAAGTTACCCTGTGTCTGCAAGTTCAAGGAC < 41bp 0.856629719013032 0.488729127562349 0.5199747 0.3424589 prediction 0.713259438026064 Functional Loss - REG3G ENSG00000143954 CDS Human protein_coding chr2:79255379 chr2:79255380 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_3600 0 0 0 0 1 unknown 0.438722838596457 0.438736254178752 0.0399494 0 hPsi_site_9017 iPseU_CNN:0.0399494;iRNA_PseU:0 9018 chr16 31927666 31927666 1 + A G SARC 31927665 + 31927645 31927685 41 AATGTGGTAAAGCCTTCAGCTATAGGTCATACCTCACTACA AATGTGGTAAAGCCTTCAGCTGTAGGTCATACCTCACTACA < 41bp 0.865113877602455 0.508498154632119 0.6670304 0.3066929 prediction 0.713231445940672 Functional Loss - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31927665 chr16:31927666 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_3601 0 0 1 0 0 chromatin 0.438735056793373 0.438732311106041 0.3340608 0 hPsi_site_9018 iPseU_CNN:0.3340608;iRNA_PseU:0 9019 chr1 207288822 207288822 1 + A G LIHC 207288821 + 207288801 207288841 41 AGTAGAGATTAAGACAGATTTATCTTTTGGATCACAAATAG AGTAGAGATTAAGACAGATTTGTCTTTTGGATCACAAATAG < 41bp 0.85656945165011 0.483619133303473 0.36484602 0.34906352 prediction 0.71313890330022 Functional Loss - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207288821 chr1:207288822 synonymous SNV . 0 22 hPsi_associated_SNPs_3602 0 0 0 0 1 Endoplasmic reticulum 0.438719279245719 0.438740762405015 0 0 hPsi_site_9019 iPseU_CNN:0;iRNA_PseU:0 9020 chr22 19751680 19751680 1 + A G LGG 19751679 + 19751659 19751699 41 CCACCCCGTGCCGCTCCAGGTACGCCTTCCACAGCTCCTCC CCACCCCGTGCCGCTCCAGGTGCGCCTTCCACAGCTCCTCC < 41bp 0.85649709560431 0.466157309264557 0.8429274 0.24065334 prediction 0.712994191208619 Functional Loss - TBX1 ENSG00000184058 CDS Human protein_coding chr22:19751679 chr22:19751680 nonsynonymous SNV 0.569 4 22 hPsi_associated_SNPs_3603 0 0 0 0 1 chromatin 0.4386202850461 0.438712394703773 0.6858548 0 hPsi_site_9020 iPseU_CNN:0.6858548;iRNA_PseU:0 9021 chr3 97499500 97499500 1 + A G LUSC 97499499 + 97499479 97499519 41 ACATGTCAGGTCAAGGAAGATACAGAAATCTCTGGGAACAC ACATGTCAGGTCAAGGAAGATGCAGAAATCTCTGGGAACAC < 41bp 0.856479833194277 0.496947596641627 0.41570854 0.2655979 prediction 0.712959666388554 Functional Loss - ARL6 ENSG00000113966 CDS Human protein_coding chr3:97499499 chr3:97499500 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3604 0 0 1 0 2 exosome 0.438742722234739 0.438719350299637 0 0 hPsi_site_9021 iPseU_CNN:0;iRNA_PseU:0 9022 chr4 140278603 140278603 1 + A G BLCA 140278602 + 140278582 140278622 41 AGTACTACTTGGCACAACATTATGACAAAATTGGTCAGCCA AGTACTACTTGGCACAACATTGTGACAAAATTGGTCAGCCA < 41bp 0.871155562436786 0.514700268192067 0.248211 0.25905553 prediction 0.71291058848944 Functional Loss - NAA15 ENSG00000164134 CDS Human protein_coding chr4:140278602 chr4:140278603 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3605 0 0 1 0 1 Cytosol 0.4387075438986 0.43876980866566 0 0 hPsi_site_9022 iPseU_CNN:0;iRNA_PseU:0 9023 chr4 72994456 72994456 1 + A G COAD 72994455 + 72994435 72994475 41 CAAGTGGCAGCAATCTTCATTATTTCCTACTTTCTGATCTT CAAGTGGCAGCAATCTTCATTGTTTCCTACTTTCTGATCTT < 41bp 0.856441333308135 0.4724873383838 0.29198092 0.29104155 prediction 0.712882666616269 Functional Loss - NPFFR2 ENSG00000056291 CDS Human protein_coding chr4:72994455 chr4:72994456 nonsynonymous SNV 0.814 0 22 hPsi_associated_SNPs_3606 0 0 0 0 0 nucleoplasm 0.439281276732502 0.439633320139001 0 0 hPsi_site_9023 iPseU_CNN:0;iRNA_PseU:0 9024 chr17 48600990 48600990 1 + A G COAD 48600989 + 48600969 48601009 41 CCTGGAGAAATTAAAACATTTACCTTCTTCTTCAAGTCTTT CCTGGAGAAATTAAAACATTTGCCTTCTTCTTCAAGTCTTT < 41bp 0.856363164133814 0.482605224680515 0.2859546 0.23960555 prediction 0.712726328267628 Functional Loss - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48600989 chr17:48600990 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_3607 0 0 0 0 1 exosome 0.438711202160079 0.438628081650377 0 0 hPsi_site_9024 iPseU_CNN:0;iRNA_PseU:0 9025 chr12 96360270 96360270 1 + A G UCEC 96360269 + 96360249 96360289 41 GGCAAACAGGGAGATCTCATTATCATCAATTCATCCCGGTG GGCAAACAGGGAGATCTCATTGTCATCAATTCATCCCGGTG < 41bp 0.868920592178474 0.512566307632229 0.3872226 0.27575642 prediction 0.712708569092489 Functional Loss - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96360269 chr12:96360270 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_3608 0 0 0 0 1 Cytosol 0.43874136161226 0.438720845140531 0 0 hPsi_site_9025 iPseU_CNN:0;iRNA_PseU:0 9026 chr20 57430359 57430359 1 + A G UCEC 57430358 + 57430338 57430378 41 TCCAGGACGAAAAGATGGGCTACATGTGTACGCACCGCCTG TCCAGGACGAAAAGATGGGCTGCATGTGTACGCACCGCCTG < 41bp 0.856316046527233 0.49059831081194 0.7159008 0.26762697 prediction 0.712632093054465 Functional Loss - GNAS ENSG00000087460 CDS Human protein_coding chr20:57430358 chr20:57430359 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_3609 0 0 0 0 1 Cytosol 0.439238883305884 0.438946122100747 0.4318016 0 hPsi_site_9026 iPseU_CNN:0.4318016;iRNA_PseU:0 9027 chr5 76029165 76029165 1 + A G SKCM 76029164 + 76029144 76029184 41 GCATCGACCCCCTAATTTACTATTACGCTTCCTCTGAGTGC GCATCGACCCCCTAATTTACTGTTACGCTTCCTCTGAGTGC < 41bp 0.856315610674053 0.496701238902657 0.29082772 0.24138188 prediction 0.712631221348107 Functional Loss - F2R ENSG00000181104 CDS Human protein_coding chr5:76029164 chr5:76029165 nonsynonymous SNV 0.908 4 22 hPsi_associated_SNPs_3610 0 0 1 0 0 Endoplasmic reticulum 0.439116156548799 0.438762576239786 0 0 hPsi_site_9027 iPseU_CNN:0;iRNA_PseU:0 9028 chr7 819722 819722 1 + A G UCEC 819721 + 819701 819741 41 AGAGCAGTGTCCAGTACCTGTACCGAGAGTTGCTGGTTCAC AGAGCAGTGTCCAGTACCTGTGCCGAGAGTTGCTGGTTCAC < 41bp 0.856312640004085 0.467879769237486 0.86892414 0.40651336 prediction 0.712625280008171 Functional Loss - DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819721 chr7:819722 nonsynonymous SNV 0.336 1 22 hPsi_associated_SNPs_3611 0 0 1 0 1 Ribosome 0.438663261218628 0.438722863752444 0.73784828 0 hPsi_site_9028 iPseU_CNN:0.73784828;iRNA_PseU:0 9029 chr14 21238518 21238518 1 + A G BLCA 21238517 + 21238497 21238537 41 AGAGCTCTCACATGTTTATCTATATCTCATGGTACAAAATC AGAGCTCTCACATGTTTATCTGTATCTCATGGTACAAAATC < 41bp 0.862440081161356 0.506134416168995 0.5019104 0.3436503 prediction 0.712611329984722 Functional Loss - EDDM3B ENSG00000181552 CDS Human protein_coding chr14:21238517 chr14:21238518 nonsynonymous SNV 0.040 4 22 hPsi_associated_SNPs_3612 0 0 0 0 0 unknown 0.438718177269546 0.438718103306224 0.00382079999999996 0 hPsi_site_9029 iPseU_CNN:0.00382079999999996;iRNA_PseU:0 9030 chr17 64880781 64880781 1 + A G UCEC 64880780 + 64880760 64880800 41 CTCCTTCCTTTTAACGGAGGTAAAGCCCGTCACCCTAAGTA CTCCTTCCTTTTAACGGAGGTGAAGCCCGTCACCCTAAGTA < 41bp 0.856296954104831 0.473039595627614 0.84613997 0.6549574 prediction 0.712593908209663 Functional Loss - CACNG5 ENSG00000075429 CDS Human protein_coding chr17:64880780 chr17:64880781 synonymous SNV . 0 22 hPsi_associated_SNPs_3613 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.38236514 0 hPsi_site_9030 iPseU_CNN:0.38236514;iRNA_PseU:0 9031 chr17 7415238 7415238 1 + A G UCEC 7415237 + 7415217 7415257 41 CACTTGGCTCTCTTGTGTGATACCATGACCTGTCGTGGCCA CACTTGGCTCTCTTGTGTGATGCCATGACCTGTCGTGGCCA < 41bp 0.856282254699622 0.462037124882343 0.4582465 0.30993044 prediction 0.712564509399245 Functional Loss - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7415237 chr17:7415238 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3614 0 0 1 0 1 Nucleus 0.427397120638611 0.390544778692514 0 0 hPsi_site_9031 iPseU_CNN:0;iRNA_PseU:0 9032 chrX 18748341 18748341 1 + A G UCEC 18748340 + 18748320 18748360 41 TCCAGAACTGGTACCGAGGTTACAAAGCTCGACTGAAGGCC TCCAGAACTGGTACCGAGGTTGCAAAGCTCGACTGAAGGCC < 41bp 0.878703018813336 0.52243482195604 0.90194595 0.31033987 prediction 0.712536393714593 Functional Loss - PPEF1 ENSG00000086717 CDS Human protein_coding chrX:18748340 chrX:18748341 nonsynonymous SNV 0.976 2 22 hPsi_associated_SNPs_3615 0 0 0 0 2 exosome 0.438945185023951 0.438714390029041 0.8038919 0 hPsi_site_9032 iPseU_CNN:0.8038919;iRNA_PseU:0 9033 chr7 889169 889169 1 + A G rs74742245 889168 + 889148 889188 41 GTGTTGCAGCTCATGCCAGTTACTATGGGAGAATGAATGTG GTGTTGCAGCTCATGCCAGTTGCTATGGGAGAATGAATGTG < 41bp 0.864469955470225 0.508272591646784 0.28201252 0.1670574 prediction 0.712394727646883 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:889168 chr7:889169 nonsynonymous SNV 0.801 1 22 hPsi_associated_SNPs_3616 0 0 1 0 1 Endoplasmic reticulum 0.438577827385241 0.438536550166067 0 0 hPsi_site_9033 iPseU_CNN:0;iRNA_PseU:0 9034 chr7 6057622 6057622 1 + A G HNSC 6057621 + 6057601 6057641 41 AAGTGCTTTGGAGAACAGAATAAAAAACAGCCCCGCCAAGA AAGTGCTTTGGAGAACAGAATGAAAAACAGCCCCGCCAAGA < 41bp 0.856185139292129 0.47351435091553 0.45104262 0.21521178 prediction 0.712370278584259 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057621 chr7:6057622 nonsynonymous SNV 0.828 0 22 hPsi_associated_SNPs_3617 0 0 1 0 1 Ribosome 0.438718593011367 0.438718669064576 0 0 hPsi_site_9034 iPseU_CNN:0;iRNA_PseU:0 9035 chr1 156351228 156351228 1 + A G COAD 156351227 + 156351207 156351247 41 ATCGGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGC ATCGGACGGCCCTCAACACATGCTACTCCCTGGCTGCCAGC < 41bp 0.856142620043359 0.457151835775892 0.28109688 0.23353672 prediction 0.712285240086717 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156351227 chr1:156351228 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_3618 0 0 0 0 2 Cytosol 0.438727556452981 0.43871432471584 0 0 hPsi_site_9035 iPseU_CNN:0;iRNA_PseU:0 9036 chr19 7592790 7592790 1 + A G BLCA 7592789 + 7592769 7592809 41 CACTTCCGGCTGAAGACCATTAACCTCCAGAGCCTCATCAA CACTTCCGGCTGAAGACCATTGACCTCCAGAGCCTCATCAA < 41bp 0.885936161009488 0.529805271589823 0.30843133 0.21945694 prediction 0.712261778839329 Functional Loss - MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7592789 chr19:7592790 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_3619 0 0 0 0 2 chromatin 0.43871843939516 0.438714437819235 0 0 hPsi_site_9036 iPseU_CNN:0;iRNA_PseU:0 9037 chr13 37014131 37014131 1 + A G STAD 37014130 + 37014110 37014150 41 TCCCAGGAAATATGAAGAGATATATCCTCCTGAAGTAGACG TCCCAGGAAATATGAAGAGATGTATCCTCCTGAAGTAGACG < 41bp 0.877692763665846 0.521566567416949 0.31483933 0.25992006 prediction 0.712252392497794 Functional Loss - CCNA1 ENSG00000133101 CDS Human protein_coding chr13:37014130 chr13:37014131 nonsynonymous SNV 0.964 4 22 hPsi_associated_SNPs_3620 0 0 0 0 1 exosome 0.438718798140967 0.438718619053938 0 0 hPsi_site_9037 iPseU_CNN:0;iRNA_PseU:0 9038 chr16 69988359 69988359 1 + A G rs2549095 69988358 + 69988338 69988378 41 GGGCTGGAACATGCAGCTGCTACCCGCGGGCTTGGTGTCCT GGGCTGGAACATGCAGCTGCTGCCCGCGGGCTTGGTGTCCT < 41bp 0.856099825288431 0.452540152674062 0.6675804 0.3248086 prediction 0.712199650576861 Functional Loss - CLEC18A ENSG00000157322 CDS Human protein_coding chr16:69988358 chr16:69988359 synonymous SNV 0.084 0 22 hPsi_associated_SNPs_3621 0 0 0 0 0 exosome 0.438712044041101 0.43871967519996 0.3351608 0 hPsi_site_9038 iPseU_CNN:0.3351608;iRNA_PseU:0 9039 chr2 101879078 101879078 1 + A G UCEC 101879077 + 101879057 101879097 41 GACCCAGACCCGGATTCTTCTAATTCTGGATTTGACAGCTC GACCCAGACCCGGATTCTTCTGATTCTGGATTTGACAGCTC < 41bp 0.883282922669354 0.527272090145964 0.28133723 0.1772064 prediction 0.712021665046781 Functional Loss - CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101879077 chr2:101879078 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_3622 0 0 1 0 2 Ribosome 0.438735848473892 0.438718509940852 0 0 hPsi_site_9039 iPseU_CNN:0;iRNA_PseU:0 9040 chr15 91503145 91503145 1 + A G UCEC 91503144 + 91503124 91503164 41 TTTCAGAGACTGGGGATATTTATATCTGGGGCTGGAATGAA TTTCAGAGACTGGGGATATTTGTATCTGGGGCTGGAATGAA < 41bp 0.889369937691234 0.533359732976319 0.21805194 0.22390983 prediction 0.71202040942983 Functional Loss - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91503144 chr15:91503145 nonsynonymous SNV 0.976 5 22 hPsi_associated_SNPs_3623 0 0 1 0 2 Ribosome 0.438718285587559 0.438713919537124 0 0 hPsi_site_9040 iPseU_CNN:0;iRNA_PseU:0 9041 chr20 18449658 18449658 1 + A G LUAD 18449657 + 18449637 18449677 41 ATTCAGAATGAAATGCCTCATATAGAAGCCCAGCAGCGGGC ATTCAGAATGAAATGCCTCATGTAGAAGCCCAGCAGCGGGC < 41bp 0.856008480264428 0.476340113151859 0.37474102 0.2257992 prediction 0.712016960528856 Functional Loss - POLR3F ENSG00000132664 CDS Human protein_coding chr20:18449657 chr20:18449658 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_3624 0 0 1 1 2 Ribosome 0.438718690277013 0.438739706182389 0 0 hPsi_site_9041 iPseU_CNN:0;iRNA_PseU:0 9042 chr14 24569425 24569425 1 + A G STAD 24569424 + 24569404 24569444 41 GGCAAACCCTGGAAACCTGGTATGTGCGGTGGGGAAGGTGT GGCAAACCCTGGAAACCTGGTGTGTGCGGTGGGGAAGGTGT < 41bp 0.873134727637731 0.517135032819326 0.5027384 0.24295777 prediction 0.711999389636811 Functional Loss - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24569424 chr14:24569425 nonsynonymous SNV 0.970 0 22 hPsi_associated_SNPs_3625 0 0 1 0 0 Endoplasmic reticulum 0.438718592994427 0.438718592997484 0.00547680000000006 0 hPsi_site_9042 iPseU_CNN:0.00547680000000006;iRNA_PseU:0 9043 chr7 7625289 7625289 1 + A G SKCM 7625288 + 7625268 7625308 41 AGATCTGAATCTCAATGTGGTAGCAATGGCTTTATCGGGTT AGATCTGAATCTCAATGTGGTGGCAATGGCTTTATCGGGTT < 41bp 0.855996203219715 0.468249483178548 0.35414052 0.22840622 prediction 0.711992406439429 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7625288 chr7:7625289 synonymous SNV . 0 22 hPsi_associated_SNPs_3626 0 0 1 0 0 Nucleus 0.438718592703668 0.438756790428151 0 0 hPsi_site_9043 iPseU_CNN:0;iRNA_PseU:0 9044 chr16 14041600 14041600 1 + A G UCEC 14041599 + 14041579 14041619 41 TGACTTTAGAGGTTGGAGATTACATCCTCACTCCAGAAATG TGACTTTAGAGGTTGGAGATTGCATCCTCACTCCAGAAATG < 41bp 0.872076771042931 0.516105175196693 0.40422267 0.3030657 prediction 0.711943191692475 Functional Loss - ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14041599 chr16:14041600 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3627 0 0 0 0 0 Nucleus 0.438701392837257 0.438364128348255 0 0 hPsi_site_9044 iPseU_CNN:0;iRNA_PseU:0 9045 chr15 45962144 45962144 1 + A G SKCM 45962143 + 45962123 45962163 41 CAGATCTCCTACCGATATCTTATTATTGCTCTCGGAATCCA CAGATCTCCTACCGATATCTTGTTATTGCTCTCGGAATCCA < 41bp 0.887966255528519 0.532003281700713 0.35164738 0.28557965 prediction 0.711925947655612 Functional Loss - SQOR ENSG00000137767;ENSG00000260170 CDS Human other chr15:45962143 chr15:45962144 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3628 0 0 0 0 2 unknown 0.43877941742587 0.438766739467027 0 0 hPsi_site_9045 iPseU_CNN:0;iRNA_PseU:0 9046 chr16 85834874 85834874 1 + A G COAD 85834873 + 85834853 85834893 41 AATTTCCACCTCTGTGTGTGTACGAGCTCATGGTAAGTGTG AATTTCCACCTCTGTGTGTGTGCGAGCTCATGGTAAGTGTG < 41bp 0.876073831869988 0.520115366616507 0.30556196 0.15646446 prediction 0.711916930506962 Functional Loss - COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85834873 chr16:85834874 synonymous SNV . 0 22 hPsi_associated_SNPs_3629 0 0 1 0 2 Ribosome 0.432188455778401 0.438917233794864 0 0 hPsi_site_9046 iPseU_CNN:0;iRNA_PseU:0 9047 chr2 235949783 235949783 1 + A G HNSC 235949782 + 235949762 235949802 41 TCAACACTGAGTGACAGCGGTATGATTGATAATCTTCCAGA TCAACACTGAGTGACAGCGGTGTGATTGATAATCTTCCAGA < 41bp 0.855954943906845 0.476129222361624 0.8090451 0.6235742 prediction 0.71190988781369 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949782 chr2:235949783 nonsynonymous SNV 0.580 0 22 hPsi_associated_SNPs_3630 0 0 0 0 0 cytosol 0.438718650981884 0.438718663139746 0.3709418 0 hPsi_site_9047 iPseU_CNN:0.3709418;iRNA_PseU:0 9048 chr2 178986032 178986032 1 + A G BLCA 178986031 + 178986011 178986051 41 CAGCTTTTCAGCATTTTTGATATAGTACCAGGATTGGAATA CAGCTTTTCAGCATTTTTGATGTAGTACCAGGATTGGAATA < 41bp 0.870559198221062 0.51463537739311 0.19561043 0.18677086 prediction 0.711847641655903 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178986031 chr2:178986032 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3631 0 0 0 0 1 Nucleus 0.438718574546173 0.438718600686046 0 0 hPsi_site_9048 iPseU_CNN:0;iRNA_PseU:0 9049 chrX 50659372 50659372 1 + A G LGG 50659371 + 50659351 50659391 41 GGATCATTGCTCCCCCTTTCTACACCCCAAACTACTGTAAA GGATCATTGCTCCCCCTTTCTGCACCCCAAACTACTGTAAA < 41bp 0.882127953813126 0.526272125777445 0.8684343 0.3652759 prediction 0.711711656071363 Functional Loss - BMP15 ENSG00000130385 CDS Human protein_coding chrX:50659371 chrX:50659372 nonsynonymous SNV 0.001 4 22 hPsi_associated_SNPs_3632 0 0 0 0 0 exosome 0.438718592694091 0.438718536795019 0.7368686 0 hPsi_site_9049 iPseU_CNN:0.7368686;iRNA_PseU:0 9050 chr1 156629037 156629037 1 + A G rs11360 156629036 + 156629016 156629056 41 GACAACATGACGAGGGGTGGTACTGGAGTCCAGGTGACAGT GACAACATGACGAGGGGTGGTGCTGGAGTCCAGGTGACAGT < 41bp 0.866456482772178 0.510614221616604 0.548131 0.2756877 prediction 0.711684522311148 Functional Loss - BCAN ENSG00000229953 ncRNA_intronic Human antisense chr1:156629036 chr1:156629037 . . 0 22 hPsi_associated_SNPs_3633 0 1 0 1 0 chromatin 0.438892983026212 0.438971406035579 0.0962620000000001 0 hPsi_site_9050 iPseU_CNN:0.0962620000000001;iRNA_PseU:0 9051 chr1 13940881 13940881 1 + A G LUAD 13940880 + 13940860 13940900 41 GGTGCAATCATCGTTGTGGTTATGCGAAAAATGTCGGGAAG GGTGCAATCATCGTTGTGGTTGTGCGAAAAATGTCGGGAAG < 41bp 0.874548332990684 0.518768632159211 0.38972878 0.224062 prediction 0.711559401662947 Functional Loss - PDPN ENSG00000162493 CDS Human protein_coding chr1:13940880 chr1:13940881 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_3634 0 0 0 0 3 Ribosome 0.426162288507408 0.425559943997305 0 0 hPsi_site_9051 iPseU_CNN:0;iRNA_PseU:0 9052 chr17 57682901 57682901 1 + A G UCEC 57682900 + 57682880 57682920 41 GAATTGTATGCCCAATCCGTTATGAATGGGTAAGAGACTTG GAATTGTATGCCCAATCCGTTGTGAATGGGTAAGAGACTTG < 41bp 0.883502936220585 0.527726685428762 0.3920877 0.26847157 prediction 0.711552501583646 Functional Loss - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57682900 chr17:57682901 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3635 0 0 1 0 1 Ribosome 0.438718781541822 0.438716477608363 0 0 hPsi_site_9052 iPseU_CNN:0;iRNA_PseU:0 9053 chr1 107599480 107599480 1 + A G COAD 107599479 + 107599459 107599499 41 GGGAACGGGACCAGCTGTACTACGAGTGCTACTCGGACGTT GGGAACGGGACCAGCTGTACTGCGAGTGCTACTCGGACGTT < 41bp 0.863689189499566 0.507938885962254 0.94157076 0.742126 prediction 0.711500607074624 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599479 chr1:107599480 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_3636 0 0 1 0 0 Ribosome 0.438718021260545 0.438717125289465 0.39888952 0 hPsi_site_9053 iPseU_CNN:0.39888952;iRNA_PseU:0 9054 chr18 33785085 33785085 1 + A G LUAD 33785084 + 33785064 33785104 41 ACACCTTCACCTTGGCTCAGTATACCTACGTGGCCCTGTCC ACACCTTCACCTTGGCTCAGTGTACCTACGTGGCCCTGTCC < 41bp 0.885779202692418 0.530030128110784 0.7614919 0.63703966 prediction 0.711498149163269 Functional Loss - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33785084 chr18:33785085 nonsynonymous SNV 0.410 3 22 hPsi_associated_SNPs_3637 0 0 1 0 1 Ribosome 0.438481808835915 0.438527239193597 0.24890448 0 hPsi_site_9054 iPseU_CNN:0.24890448;iRNA_PseU:0 9055 chr1 160389291 160389291 1 + A G LGG 160389290 + 160389270 160389310 41 ACGCCCTTCTTTTCGTGCACTACCTGGCCGTGGTCCTGCTG ACGCCCTTCTTTTCGTGCACTGCCTGGCCGTGGTCCTGCTG < 41bp 0.855745399033845 0.475441527220697 0.90138054 0.3445878 prediction 0.71149079806769 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160389290 chr1:160389291 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_3638 0 0 1 0 0 exosome 0.439113691377635 0.438662930359329 0.80276108 0 hPsi_site_9055 iPseU_CNN:0.80276108;iRNA_PseU:0 9056 chr14 100331909 100331909 1 + A G CESC 100331908 + 100331888 100331928 41 GGTCAACAATGGCACTGTGTTACCAAAGAAACCTACTGGCT GGTCAACAATGGCACTGTGTTGCCAAAGAAACCTACTGGCT < 41bp 0.886951427211937 0.531303378485764 0.32716718 0.25781265 prediction 0.711296097452347 Functional Loss - EML1 ENSG00000066629 CDS Human protein_coding chr14:100331908 chr14:100331909 synonymous SNV . 0 22 hPsi_associated_SNPs_3639 0 0 0 0 2 Nucleus 0.438718593482194 0.438718685434994 0 0 hPsi_site_9056 iPseU_CNN:0;iRNA_PseU:0 9057 chr5 131923651 131923651 1 + A G rs144639596 131923650 + 131923630 131923670 41 TGATGAGCAACTAAATGACTTATATCACAATCACCAGAGAA TGATGAGCAACTAAATGACTTGTATCACAATCACCAGAGAA < 41bp 0.855645887188722 0.482533062965767 0.78210586 0.6136942 prediction 0.711291774377445 Functional Loss - RAD50 ENSG00000113522 CDS Human protein_coding chr5:131923650 chr5:131923651 synonymous SNV . 0 22 hPsi_associated_SNPs_3640 1 0 1 0 1 Cytosol 0.439410450033854 0.439257050667642 0.33682332 0 hPsi_site_9057 iPseU_CNN:0.33682332;iRNA_PseU:0 9058 chr1 116569566 116569566 1 + A G COAD 116569565 + 116569545 116569585 41 CATTGCCCAATATGCCCTGTTAGGATACTTCATCCGCTCCT CATTGCCCAATATGCCCTGTTGGGATACTTCATCCGCTCCT < 41bp 0.888580760509836 0.532967205658368 0.66480136 0.42109296 prediction 0.711227109702937 Functional Loss - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116569565 chr1:116569566 synonymous SNV . 0 22 hPsi_associated_SNPs_3641 0 0 1 0 2 cytosol 0.438718598970666 0.438716665203543 0.32960272 0 hPsi_site_9058 iPseU_CNN:0.32960272;iRNA_PseU:0 9059 chr6 111587311 111587311 1 + A G rs117701011 111587310 + 111587290 111587330 41 AGTACCTAATGATAAGAATTTACTGTGGGCTTATGCTGTTA AGTACCTAATGATAAGAATTTGCTGTGGGCTTATGCTGTTA < 41bp 0.855576492337428 0.482237329733266 0.547042 0.29959804 prediction 0.711152984674855 Functional Loss - MFSD4B ENSG00000173214 CDS Human protein_coding chr6:111587310 chr6:111587311 synonymous SNV . 0 22 hPsi_associated_SNPs_3642 0 0 1 0 0 Nucleus 0.438718593279953 0.438718584705015 0.0940840000000001 0 hPsi_site_9059 iPseU_CNN:0.0940840000000001;iRNA_PseU:0 9060 chr19 14034231 14034231 1 + A G HNSC 14034230 + 14034210 14034250 41 CTCAGGAGGCCGCCCGGCGCTATGGTGAACTCACCAAGCTC CTCAGGAGGCCGCCCGGCGCTGTGGTGAACTCACCAAGCTC < 41bp 0.888776915982309 0.533242075824386 0.44239107 0.29730842 prediction 0.711069680315847 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14034230 chr19:14034231 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_3643 0 0 1 0 2 chromatin 0.438718591943278 0.438718587069283 0 0 hPsi_site_9060 iPseU_CNN:0;iRNA_PseU:0 9061 chr10 26789948 26789948 1 + A G STAD 26789947 + 26789927 26789967 41 ACAAATGTTGCTGCCACTGGTATCAGCCAATATGAGGATGA ACAAATGTTGCTGCCACTGGTGTCAGCCAATATGAGGATGA < 41bp 0.855508649178884 0.468167523752217 0.6650883 0.30045128 prediction 0.711017298357769 Functional Loss - APBB1IP ENSG00000077420 CDS Human protein_coding chr10:26789947 chr10:26789948 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_3644 0 0 0 0 1 nucleus 0.437412255828559 0.438606194171991 0.3301766 0 hPsi_site_9061 iPseU_CNN:0.3301766;iRNA_PseU:0 9062 chr22 20760486 20760486 1 + A G STAD 20760485 + 20760465 20760505 41 TCCACACGGGCGAGAAGCCCTACCAGTGCGGCTCCTGCGGC TCCACACGGGCGAGAAGCCCTGCCAGTGCGGCTCCTGCGGC < 41bp 0.855502358115147 0.471690362382798 0.45295557 0.19722098 prediction 0.711004716230295 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20760485 chr22:20760486 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_3645 0 0 0 0 0 Cytosol 0.438718649895554 0.438718566406187 0 0 hPsi_site_9062 iPseU_CNN:0;iRNA_PseU:0 9063 chr20 30232572 30232572 1 + A G UCEC 30232571 + 30232551 30232591 41 ACCCCATGTACTCCCTGCAGTATTTCCTCCAAAGCCGATCA ACCCCATGTACTCCCTGCAGTGTTTCCTCCAAAGCCGATCA < 41bp 0.855499668624377 0.477254760716627 0.6205551 0.3651247 prediction 0.710999337248753 Functional Loss - COX4I2 ENSG00000131055 CDS Human protein_coding chr20:30232571 chr20:30232572 synonymous SNV . 0 22 hPsi_associated_SNPs_3646 0 0 0 0 1 exosome 0.43872382936276 0.43871381099785 0.2411102 0 hPsi_site_9063 iPseU_CNN:0.2411102;iRNA_PseU:0 9064 chr7 26248127 26248127 1 + A G BRCA 26248126 + 26248106 26248146 41 TGGTACAAAAAGAAAATCTTTATCTGACAGTGAATCTGATG TGGTACAAAAAGAAAATCTTTGTCTGACAGTGAATCTGATG < 41bp 0.855484267284619 0.480377153257563 0.3819562 0.2660364 prediction 0.710968534569238 Functional Loss - CBX3 ENSG00000122565 CDS Human protein_coding chr7:26248126 chr7:26248127 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3647 0 0 1 0 2 Ribosome 0.438563378604989 0.438603286478396 0 0 hPsi_site_9064 iPseU_CNN:0;iRNA_PseU:0 9065 chr17 39411984 39411984 1 + A G ESCA 39411983 + 39411963 39412003 41 TGTACTGCAGAAGAACCTGCTACTACCCGACGACTGTCTGC TGTACTGCAGAAGAACCTGCTGCTACCCGACGACTGTCTGC < 41bp 0.855483683984484 0.477819377616851 0.38597366 0.19896281 prediction 0.710967367968968 Functional Loss - KRTAP9-9 ENSG00000198083 CDS Human protein_coding chr17:39411983 chr17:39411984 nonsynonymous SNV 0.380 2 22 hPsi_associated_SNPs_3648 0 0 0 0 0 unknown 0.438718593812678 0.438719096472631 0 0 hPsi_site_9065 iPseU_CNN:0;iRNA_PseU:0 9066 chrX 100881086 100881086 1 + A G UCEC 100881085 + 100881065 100881105 41 ATGGCCAAACTTGCTGAACATATGTTCCCAAAGAGCCAGGA ATGGCCAAACTTGCTGAACATGTGTTCCCAAAGAGCCAGGA < 41bp 0.855474246645619 0.489211013791194 0.3903901 0.28905624 prediction 0.710948493291238 Functional Loss - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100881085 chrX:100881086 nonsynonymous SNV 0.922 2 22 hPsi_associated_SNPs_3649 0 0 1 0 0 Endoplasmic reticulum 0.439153359178293 0.438863611635934 0 0 hPsi_site_9066 iPseU_CNN:0;iRNA_PseU:0 9067 chr19 17660284 17660284 1 + A G rs372827884 17660283 + 17660263 17660303 41 GACCCTTGGTGCCAATGATGTATCCTGCACTCTGGACGGCT GACCCTTGGTGCCAATGATGTGTCCTGCACTCTGGACGGCT < 41bp 0.85546196706461 0.475064326824936 0.8111962 0.2537998 prediction 0.71092393412922 Functional Loss - FAM129C ENSG00000167483 CDS Human protein_coding chr19:17660283 chr19:17660284 synonymous SNV . 0 22 hPsi_associated_SNPs_3650 0 0 0 0 3 exosome 0.43871925793453 0.438733856129488 0.6223924 0 hPsi_site_9067 iPseU_CNN:0.6223924;iRNA_PseU:0 9068 chr19 12738642 12738642 1 + A G STAD 12738641 + 12738621 12738661 41 AGACTGCCGGAGTAAAACCATATGAGTGTACTATCTGTGGA AGACTGCCGGAGTAAAACCATGTGAGTGTACTATCTGTGGA < 41bp 0.870119270616329 0.514657720525651 0.17841837 0.18177831 prediction 0.710923100181355 Functional Loss - ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12738641 chr19:12738642 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3651 0 0 1 0 0 Cytosol 0.438710098069274 0.438676469411145 0 0 hPsi_site_9068 iPseU_CNN:0;iRNA_PseU:0 9069 chr10 126660649 126660649 1 + A G LUSC 126660648 + 126660628 126660668 41 GAAAGGGGGATTTTGCTTGCTATTTTCTGACTGACCTTGTA GAAAGGGGGATTTTGCTTGCTGTTTTCTGACTGACCTTGTA < 41bp 0.874190083331652 0.518732097495982 0.6256418 0.30945253 prediction 0.71091597167134 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126660648 chr10:126660649 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3652 0 0 1 0 1 Ribosome 0.438717864366821 0.438718887349907 0.2512836 0 hPsi_site_9069 iPseU_CNN:0.2512836;iRNA_PseU:0 9070 chr3 32995289 32995289 1 + A G UCEC 32995288 + 32995268 32995308 41 GGTGGGCTTTTACAGTGGCATATTCTTTGTCATGCTCATGA GGTGGGCTTTTACAGTGGCATGTTCTTTGTCATGCTCATGA < 41bp 0.855454480006747 0.478338054773655 0.34727 0.2911519 prediction 0.710908960013494 Functional Loss - CCR4 ENSG00000183813 CDS Human protein_coding chr3:32995288 chr3:32995289 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_3653 0 0 0 0 0 exosome 0.438718874969202 0.438726342677717 0 0 hPsi_site_9070 iPseU_CNN:0;iRNA_PseU:0 9071 chr5 145890061 145890061 1 + A G BLCA 145890060 + 145890040 145890080 41 GAAAGATGTAGAAAAAATTTTACAGAATGACAAACGGTATC GAAAGATGTAGAAAAAATTTTGCAGAATGACAAACGGTATC < 41bp 0.855384949312872 0.488824943902815 0.45019773 0.26901406 prediction 0.710769898625744 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145890060 chr5:145890061 synonymous SNV . 0 22 hPsi_associated_SNPs_3654 0 0 1 0 1 Nucleus 0.438714038096569 0.438692118322865 0 0 hPsi_site_9071 iPseU_CNN:0;iRNA_PseU:0 9072 chr12 69127301 69127301 1 + A G ESCA 69127300 + 69127280 69127320 41 AGGATTCTATAGCAGAAATCTATAATCAGTGCGAGGAACAA AGGATTCTATAGCAGAAATCTGTAATCAGTGCGAGGAACAA < 41bp 0.855365280742449 0.478593234922897 0.3224245 0.19588673 prediction 0.710730561484898 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69127300 chr12:69127301 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_3655 0 0 1 0 2 chromatin 0.438718661444784 0.438718825006331 0 0 hPsi_site_9072 iPseU_CNN:0;iRNA_PseU:0 9073 chr15 72873158 72873158 1 + A G rs144813486 72873157 + 72873137 72873177 41 CCTGCGCTTTGAGCACAAACTATATGCTCAGGTGAAACAGA CCTGCGCTTTGAGCACAAACTGTATGCTCAGGTGAAACAGA < 41bp 0.855349136672406 0.474061412285642 0.35591233 0.29929936 prediction 0.710698273344811 Functional Loss - ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72873157 chr15:72873158 synonymous SNV . 0 22 hPsi_associated_SNPs_3656 0 0 1 0 1 Cytosol 0.43837115917194 0.438948646949804 0 0 hPsi_site_9073 iPseU_CNN:0;iRNA_PseU:0 9074 chr19 42585093 42585093 1 + A G UCEC 42585092 + 42585072 42585112 41 GGCAAAGCGTTCCGTCAGAGTACCCACCTGAAAGACCACCG GGCAAAGCGTTCCGTCAGAGTGCCCACCTGAAAGACCACCG < 41bp 0.855344349864772 0.4833704711902 0.7791188 0.21846914 prediction 0.710688699729545 Functional Loss - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42585092 chr19:42585093 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3657 0 0 1 0 0 Cytosol 0.438719212003384 0.438728997462918 0.5582376 0 hPsi_site_9074 iPseU_CNN:0.5582376;iRNA_PseU:0 9075 chr8 99961724 99961724 1 + A G PRAD 99961723 + 99961703 99961743 41 AAGTTTTGCGGCAGACACTTTACCAAATCCTACAATTTGCT AAGTTTTGCGGCAGACACTTTGCCAAATCCTACAATTTGCT < 41bp 0.882140808294164 0.526799020396454 0.715917 0.40210348 prediction 0.71068357579542 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961723 chr8:99961724 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3658 0 0 1 0 0 exosome 0.437036264584454 0.429562442647625 0.431834 0 hPsi_site_9075 iPseU_CNN:0.431834;iRNA_PseU:0 9076 chr1 76226969 76226969 1 + A G PAAD 76226968 + 76226948 76226988 41 GATATTGCAAATCAGTTAGCTACTGATGCTGTGCAGATACT GATATTGCAAATCAGTTAGCTGCTGATGCTGTGCAGATACT < 41bp 0.855304357307493 0.488062145067515 0.22403243 0.16034871 prediction 0.710608714614987 Functional Loss - ACADM ENSG00000117054 CDS Human protein_coding chr1:76226968 chr1:76226969 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_3659 0 0 1 0 0 Cytosol 0.447846915960528 0.429701530752156 0 0 hPsi_site_9076 iPseU_CNN:0;iRNA_PseU:0 9077 chr1 158815610 158815610 1 + A G UCEC 158815609 + 158815589 158815629 41 AAGGAAGAAGGTCATTACCATATCTGATTACTCTGAATGTA AAGGAAGAAGGTCATTACCATGTCTGATTACTCTGAATGTA < 41bp 0.864789887288066 0.509503150911446 0.28370148 0.27222812 prediction 0.710573472753239 Functional Loss - MNDA ENSG00000163563 CDS Human protein_coding chr1:158815609 chr1:158815610 nonsynonymous SNV 0.016 3 22 hPsi_associated_SNPs_3660 0 0 0 0 0 exosome 0.438833536827733 0.438791160198462 0 0 hPsi_site_9077 iPseU_CNN:0;iRNA_PseU:0 9078 chr2 208425067 208425067 1 + A G UCEC 208425066 + 208425046 208425086 41 CAGGCGGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCA CAGGCGGCCCAGCCATCAGTTGTTCAGTCTCCACAAGTCCA < 41bp 0.8552660537798 0.47489800466563 0.818776 0.34575048 prediction 0.7105321075596 Functional Loss - CREB1 ENSG00000118260 CDS Human protein_coding chr2:208425066 chr2:208425067 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3661 0 0 1 1 1 chromatin 0.438702500927688 0.438770757036302 0.637552 0 hPsi_site_9078 iPseU_CNN:0.637552;iRNA_PseU:0 9079 chr1 65243698 65243698 1 + A G GBM 65243697 + 65243677 65243717 41 TCTAAGTGCCTTTGTATTGATAAACTCCCCAGTGACTACAG TCTAAGTGCCTTTGTATTGATGAACTCCCCAGTGACTACAG < 41bp 0.855249984031789 0.477828037861757 0.4606188 0.3531517 prediction 0.710499968063578 Functional Loss - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65243697 chr1:65243698 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3662 0 0 1 0 1 Ribosome 0.438718626238191 0.438731432794749 0 0 hPsi_site_9079 iPseU_CNN:0;iRNA_PseU:0 9080 chr18 21098931 21098931 1 + A G UCEC 21098930 + 21098910 21098950 41 CAGGAGCGGAGGTGGTCCTCTATCATCTACCACGGTAGATT CAGGAGCGGAGGTGGTCCTCTGTCATCTACCACGGTAGATT < 41bp 0.85522463580597 0.459448515639737 0.5895474 0.30332375 prediction 0.710449271611941 Functional Loss - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21098930 chr18:21098931 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3663 0 0 0 0 2 Ribosome 0.438718593075637 0.43871859411872 0.1790948 0 hPsi_site_9080 iPseU_CNN:0.1790948;iRNA_PseU:0 9081 chr17 72791211 72791211 1 + A G rs146065897 72791210 + 72791190 72791230 41 TGTATGGAGACCTCGCCATCTATGCTGCTGCCGTGCCCTTC TGTATGGAGACCTCGCCATCTGTGCTGCTGCCGTGCCCTTC < 41bp 0.855213998490125 0.448063952490685 0.30249184 0.2892407 prediction 0.710427996980249 Functional Loss - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72791210 chr17:72791211 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_3664 0 0 1 0 2 Endoplasmic reticulum 0.438719810443841 0.438718641515474 0 0 hPsi_site_9081 iPseU_CNN:0;iRNA_PseU:0 9082 chr1 32508212 32508212 1 + A G KIRP 32508211 + 32508191 32508231 41 GAGCATACAGAGAGCACCCATATGGACGTTATTAAAAACAA GAGCATACAGAGAGCACCCATGTGGACGTTATTAAAAACAA < 41bp 0.863365382370453 0.508215226680429 0.22987169 0.21513999 prediction 0.710300311380049 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32508211 chr1:32508212 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3665 0 0 1 0 1 Nucleus 0.438718587656069 0.438717892343558 0 0 hPsi_site_9082 iPseU_CNN:0;iRNA_PseU:0 9083 chr11 30352686 30352686 1 + A G UCEC 30352685 + 30352665 30352705 41 GCTTTCATCATGTAAAAATTTACATTGACAGATTTGAGGAT GCTTTCATCATGTAAAAATTTGCATTGACAGATTTGAGGAT < 41bp 0.857059332818889 0.501926174980755 0.446863 0.25822964 prediction 0.710266315676268 Functional Loss - ARL14EP ENSG00000152219 CDS Human protein_coding chr11:30352685 chr11:30352686 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3666 0 0 1 0 0 chromatin 0.43871644289046 0.438557613658263 0 0 hPsi_site_9083 iPseU_CNN:0;iRNA_PseU:0 9084 chr13 80117762 80117762 1 + A G ESCA 80117761 + 80117741 80117781 41 CCAATACCATAGCTGGAAGGTATGGTGCTATCTGCGGATTT CCAATACCATAGCTGGAAGGTGTGGTGCTATCTGCGGATTT < 41bp 0.855128175301682 0.487514252809445 0.7444138 0.53717965 prediction 0.710256350603365 Functional Loss - NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80117761 chr13:80117762 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3667 0 0 1 0 2 Ribosome 0.438718592992249 0.438718592826694 0.4144683 0 hPsi_site_9084 iPseU_CNN:0.4144683;iRNA_PseU:0 9085 chr1 205238899 205238899 1 + A G COAD 205238898 + 205238878 205238918 41 GGATGCTCTGCTGGAAGAGCTACGGGAGATCAAGGAGGGAC GGATGCTCTGCTGGAAGAGCTGCGGGAGATCAAGGAGGGAC < 41bp 0.855098384643 0.471513734771572 0.71818954 0.32717878 prediction 0.710196769286001 Functional Loss - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205238898 chr1:205238899 synonymous SNV . 0 22 hPsi_associated_SNPs_3668 0 0 0 0 0 chromatin 0.438718592995415 0.438718592995506 0.43637908 0 hPsi_site_9085 iPseU_CNN:0.43637908;iRNA_PseU:0 9086 chr11 117053485 117053485 1 + A G UCEC 117053484 + 117053464 117053504 41 ACGTAGCCTTCATCGGCATGTACCAGACGATGACCAAGAAG ACGTAGCCTTCATCGGCATGTGCCAGACGATGACCAAGAAG < 41bp 0.855096894130289 0.454203992487327 0.9387562 0.27289653 prediction 0.710193788260579 Functional Loss - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117053484 chr11:117053485 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_3669 0 0 1 0 1 Ribosome 0.43870834218872 0.438684589932698 0.8775124 0 hPsi_site_9086 iPseU_CNN:0.8775124;iRNA_PseU:0 9087 chr1 55161093 55161093 1 + A G SKCM 55161092 + 55161072 55161112 41 AGGAGCTGTGCCGCATCCTCTACCTGCTCATCCCGCTCCTG AGGAGCTGTGCCGCATCCTCTGCCTGCTCATCCCGCTCCTG < 41bp 0.855088852199029 0.469438287609203 0.8828279 0.37550503 prediction 0.710177704398059 Functional Loss - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55161092 chr1:55161093 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3670 0 0 0 0 2 exosome 0.440423062314806 0.439321108553579 0.7656558 0 hPsi_site_9087 iPseU_CNN:0.7656558;iRNA_PseU:0 9088 chrX 100381766 100381766 1 + A G LUAD 100381765 + 100381745 100381785 41 TGCTCCTGCTCTGATTTCAGTATCTTTGCCTGTAAGGAAGA TGCTCCTGCTCTGATTTCAGTGTCTTTGCCTGTAAGGAAGA < 41bp 0.855082425979996 0.47507781023561 0.23786101 0.19515449 prediction 0.710164851959993 Functional Loss - CENPI ENSG00000102384 CDS Human protein_coding chrX:100381765 chrX:100381766 synonymous SNV . 0 22 hPsi_associated_SNPs_3671 0 0 1 0 2 Nucleus 0.438718597410753 0.438718631303484 0 0 hPsi_site_9088 iPseU_CNN:0;iRNA_PseU:0 9089 chr18 10485496 10485496 1 + A G PAAD 10485495 + 10485475 10485515 41 GCATCGCCTGTCGGATCATCTATCGGTCAGACGAGCACCAC GCATCGCCTGTCGGATCATCTGTCGGTCAGACGAGCACCAC < 41bp 0.855018055562558 0.451468691033783 0.56995755 0.301153 prediction 0.710036111125115 Functional Loss - APCDD1 ENSG00000154856 CDS Human protein_coding chr18:10485495 chr18:10485496 nonsynonymous SNV 0.718 0 22 hPsi_associated_SNPs_3672 0 0 0 0 1 Cytosol 0.438676051482657 0.43863503814241 0.1399151 0 hPsi_site_9089 iPseU_CNN:0.1399151;iRNA_PseU:0 9090 chr10 14939462 14939462 1 + A G UCEC 14939461 + 14939441 14939481 41 CAATGGACGTGGCTGGGGTGTAAAGACCCTTGTGAAGATTA CAATGGACGTGGCTGGGGTGTGAAGACCCTTGTGAAGATTA < 41bp 0.855010569410236 0.480193794727242 0.7032751 0.34808838 prediction 0.710021138820472 Functional Loss - SUV39H2 ENSG00000152455 CDS Human protein_coding chr10:14939461 chr10:14939462 synonymous SNV . 0 22 hPsi_associated_SNPs_3673 0 0 1 0 1 Cytosol 0.438724588499508 0.438718591783615 0.4065502 0 hPsi_site_9090 iPseU_CNN:0.4065502;iRNA_PseU:0 9091 chr16 29376055 29376055 1 + A G UCEC 29376054 + 29376034 29376074 41 AAAAAGCAAGTGACCAACATTATCTCATTTGATGATGAGGA AAAAAGCAAGTGACCAACATTGTCTCATTTGATGATGAGGA < 41bp 0.854919293862279 0.476536590144937 0.44213012 0.34191442 prediction 0.709838587724559 Functional Loss - SNX29P2 ENSG00000198106;ENSG00000271699 ncRNA_exonic Human other chr16:29376054 chr16:29376055 . . 0 22 hPsi_associated_SNPs_3674 0 0 0 0 1 unknown 0.432229590487178 0.418785676667674 0 0 hPsi_site_9091 iPseU_CNN:0;iRNA_PseU:0 9092 chr7 6063070 6063070 1 + A G UCEC 6063069 + 6063049 6063089 41 AACCCTTATAGATAGCTGGGTAGATATTGCGATTTTTCAGT AACCCTTATAGATAGCTGGGTGGATATTGCGATTTTTCAGT < 41bp 0.854900165083909 0.478201043664226 0.3670737 0.22693568 prediction 0.709800330167818 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063069 chr7:6063070 synonymous SNV . 0 22 hPsi_associated_SNPs_3675 0 0 0 0 0 Ribosome 0.438718589775378 0.438718592995377 0 0 hPsi_site_9092 iPseU_CNN:0;iRNA_PseU:0 9093 chrX 65427122 65427122 1 + A G LUSC 65427121 + 65427101 65427141 41 TTCAGGGAATACACTGATGGTACATTCAGGATCCCTCGGCC TTCAGGGAATACACTGATGGTGCATTCAGGATCCCTCGGCC < 41bp 0.891722139860159 0.536903193905986 0.7862184 0.33518714 prediction 0.709637891908346 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65427121 chrX:65427122 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3676 0 0 1 0 2 Nucleus 0.438718082365589 0.438897432947371 0.5724368 0 hPsi_site_9093 iPseU_CNN:0.5724368;iRNA_PseU:0 9094 chr11 68682465 68682465 1 + A G LUAD 68682464 + 68682444 68682484 41 AGTGCCCAGATTGTTGCAGATATCAGGAAGGACATCGACCA AGTGCCCAGATTGTTGCAGATGTCAGGAAGGACATCGACCA < 41bp 0.854787733627146 0.460817273684487 0.32098797 0.238449 prediction 0.709575467254291 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68682464 chr11:68682465 nonsynonymous SNV 0.640 2 22 hPsi_associated_SNPs_3677 0 0 1 0 1 chromatin 0.439451045328479 0.438724505685139 0 0 hPsi_site_9094 iPseU_CNN:0;iRNA_PseU:0 9095 chr1 112999551 112999551 1 + A G rs113335893 112999550 + 112999530 112999570 41 GGACCAACAAGCCAGTGGCCTACAGAGCCCTCCATCCAGGG GGACCAACAAGCCAGTGGCCTGCAGAGCCCTCCATCCAGGG < 41bp 0.874880004004301 0.520101408058977 0.51986724 0.24360728 prediction 0.709557191890648 Functional Loss - CTTNBP2NL ENSG00000143079 CDS Human protein_coding chr1:112999550 chr1:112999551 synonymous SNV . 0 22 hPsi_associated_SNPs_3678 0 0 1 0 0 Ribosome 0.438718819219062 0.438718572642045 0.0397344799999999 0 hPsi_site_9095 iPseU_CNN:0.0397344799999999;iRNA_PseU:0 9096 chr20 2593880 2593880 1 + A G STAD 2593879 + 2593859 2593899 41 TGTCTGACATGCTGGTAACGTACATCACCATCCTGCTGGGG TGTCTGACATGCTGGTAACGTGCATCACCATCCTGCTGGGG < 41bp 0.854774316772243 0.451071720149859 0.6750182 0.3261943 prediction 0.709548633544486 Functional Loss - TMC2 ENSG00000149488 CDS Human protein_coding chr20:2593879 chr20:2593880 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3679 0 0 0 0 2 exosome 0.438459828345613 0.438771490033312 0.3500364 0 hPsi_site_9096 iPseU_CNN:0.3500364;iRNA_PseU:0 9097 chr7 100866982 100866982 1 + A G LUSC 100866981 + 100866961 100867001 41 GTGTGGCCGAGGGCCCTAACTACCTGACGGCCTGTGCGGGA GTGTGGCCGAGGGCCCTAACTGCCTGACGGCCTGTGCGGGA < 41bp 0.854764732589933 0.46141054797672 0.37669545 0.2173832 prediction 0.709529465179865 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866981 chr7:100866982 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3680 0 0 1 0 1 Cytosol 0.43871957232288 0.438717570722613 0 0 hPsi_site_9097 iPseU_CNN:0;iRNA_PseU:0 9098 chr1 43826252 43826252 1 + A G UCEC 43826251 + 43826231 43826271 41 GCTCCCTAAGCTGGAACAGCTATATCCTGTCCAGGTCAGTG GCTCCCTAAGCTGGAACAGCTGTATCCTGTCCAGGTCAGTG < 41bp 0.876695858356464 0.521932107125453 0.67826176 0.55919725 prediction 0.709527502462023 Functional Loss - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43826251 chr1:43826252 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3681 0 0 1 0 2 Ribosome 0.438718592981703 0.438718592993449 0.23812902 0 hPsi_site_9098 iPseU_CNN:0.23812902;iRNA_PseU:0 9099 chr20 31436533 31436533 1 + A G UCEC 31436532 + 31436512 31436552 41 AGGAGGAGCAAGAAGAGTATTAACAGCCTGGACCAGCAGAG AGGAGGAGCAAGAAGAGTATTGACAGCCTGGACCAGCAGAG < 41bp 0.854761394905457 0.489413126637114 0.41669738 0.2800572 prediction 0.709522789810913 Functional Loss - MAPRE1 ENSG00000101367 CDS Human protein_coding chr20:31436532 chr20:31436533 synonymous SNV . 0 22 hPsi_associated_SNPs_3682 0 0 1 0 1 Cytosol 0.43871859224601 0.43869269117221 0 0 hPsi_site_9099 iPseU_CNN:0;iRNA_PseU:0 9100 chr8 90926337 90926337 1 + A G LUAD 90926336 + 90926316 90926356 41 TCAGGAATATGCCTTTCTTATATGTTATCAGGCTACAGACC TCAGGAATATGCCTTTCTTATGTGTTATCAGGCTACAGACC < 41bp 0.872342937870336 0.517591348478329 0.31214988 0.3016788 prediction 0.709503178784014 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90926336 chr8:90926337 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3683 0 0 0 0 1 Cytosol 0.438391349223672 0.438534972686224 0 0 hPsi_site_9100 iPseU_CNN:0;iRNA_PseU:0 9101 chr2 26411461 26411461 1 + A G rs183150849 26411460 + 26411440 26411480 41 AACACCACCTCATGCCCTGCTATAGACCTTCACAAACGACT AACACCACCTCATGCCCTGCTGTAGACCTTCACAAACGACT < 41bp 0.854751523919291 0.491573378713111 0.6390838 0.47017464 prediction 0.709503047838583 Functional Loss - GAREM2 ENSG00000157833 UTR3 Human protein_coding chr2:26411460 chr2:26411461 . . 0 22 hPsi_associated_SNPs_3684 0 0 1 0 0 Exosome 0.438718264408395 0.438683208923219 0.2781676 0 hPsi_site_9101 iPseU_CNN:0.2781676;iRNA_PseU:0 9102 chr1 6679911 6679911 1 + A G LIHC 6679910 + 6679890 6679930 41 CCTGCTAACAGCACTGCTGGTACCATTGACAGCGACGGCTG CCTGCTAACAGCACTGCTGGTGCCATTGACAGCGACGGCTG < 41bp 0.854734168030044 0.467852360310042 0.8480954 0.22984791 prediction 0.709468336060088 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6679910 chr1:6679911 nonsynonymous SNV 0.927 3 22 hPsi_associated_SNPs_3685 0 0 1 0 1 cytosol 0.438727167678659 0.439495380006314 0.6961908 0 hPsi_site_9102 iPseU_CNN:0.6961908;iRNA_PseU:0 9103 chr17 53851086 53851086 1 + A G rs567847776 53851085 + 53851065 53851105 41 TGCCTTAACTGGCTATGCAGTATGTCTACCTTCGGCAGCGG TGCCTTAACTGGCTATGCAGTGTGTCTACCTTCGGCAGCGG < 41bp 0.887967240605809 0.5332366553486 0.36189926 0.26345986 prediction 0.709461170514418 Functional Loss - PCTP ENSG00000141179 CDS Human protein_coding chr17:53851085 chr17:53851086 nonsynonymous SNV 0.090 3 22 hPsi_associated_SNPs_3686 0 0 1 2 2 Ribosome 0.438718593295091 0.438719612004139 0 0 hPsi_site_9103 iPseU_CNN:0;iRNA_PseU:0 9104 chr8 104390323 104390323 1 + A G STAD 104390322 + 104390302 104390342 41 GTTCAGTGGCTCACTTCGGCTAAAATGCAGAAATGCATGCT GTTCAGTGGCTCACTTCGGCTGAAATGCAGAAATGCATGCT < 41bp 0.854719267268898 0.459422160448986 0.7474321 0.25602353 prediction 0.709438534537796 Functional Loss - CTHRC1 ENSG00000164932 CDS Human protein_coding chr8:104390322 chr8:104390323 synonymous SNV . 0 22 hPsi_associated_SNPs_3687 0 0 0 0 1 nucleus 0.43506561607172 0.438461428743982 0.4948642 0 hPsi_site_9104 iPseU_CNN:0.4948642;iRNA_PseU:0 9105 chr9 96291840 96291840 1 + A G LUAD 96291839 + 96291819 96291859 41 AGAAGGGGCTGATGTACCCCTACATCTTCCATGTCCTGACG AGAAGGGGCTGATGTACCCCTGCATCTTCCATGTCCTGACG < 41bp 0.854705435105612 0.467226049235611 0.32914722 0.27712595 prediction 0.709410870211225 Functional Loss - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96291839 chr9:96291840 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3688 0 0 1 0 0 Endoplasmic reticulum 0.438718592951674 0.438718592777381 0 0 hPsi_site_9105 iPseU_CNN:0;iRNA_PseU:0 9106 chr15 41672537 41672537 1 + A G rs184714557 41672536 + 41672516 41672556 41 TCCATGGGTTCTTCATGTGCTATGATCTCTGAAAAGACGTT TCCATGGGTTCTTCATGTGCTGTGATCTCTGAAAAGACGTT < 41bp 0.854679258453193 0.498245435344058 0.33487684 0.28867543 prediction 0.709358516906387 Functional Loss - NUSAP1 ENSG00000137804 UTR3 Human protein_coding chr15:41672536 chr15:41672537 . . 0 22 hPsi_associated_SNPs_3689 0 0 1 0 0 Nucleus 0.439248358903491 0.439411693640464 0 0 hPsi_site_9106 iPseU_CNN:0;iRNA_PseU:0 9107 chr7 73973307 73973307 1 + A G STAD 73973306 + 73973286 73973326 41 ATCCCGTTCCGAAAGCCCTGTACCTTCGGCTCCCAGAACCT ATCCCGTTCCGAAAGCCCTGTGCCTTCGGCTCCCAGAACCT < 41bp 0.892974209755272 0.538301655550665 0.71198946 0.20502123 prediction 0.709345108409215 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73973306 chr7:73973307 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3690 0 0 1 0 1 Nucleus 0.438770941833197 0.438855545918551 0.42397892 0 hPsi_site_9107 iPseU_CNN:0.42397892;iRNA_PseU:0 9108 chr16 706502 706502 1 + A G UCEC 706501 + 706481 706521 41 GCCACCGTGTCCCAGGACCGTACCGTCCGCATCTGGGACCT GCCACCGTGTCCCAGGACCGTGCCGTCCGCATCTGGGACCT < 41bp 0.854660478590541 0.481564904511538 0.9195101 0.62202036 prediction 0.709320957181082 Functional Loss - WDR90 ENSG00000161996 CDS Human protein_coding chr16:706501 chr16:706502 nonsynonymous SNV 0.041 3 22 hPsi_associated_SNPs_3691 0 0 1 0 0 Cytosol 0.443244944247858 0.439329900367671 0.59497948 0 hPsi_site_9108 iPseU_CNN:0.59497948;iRNA_PseU:0 9109 chr19 39868360 39868360 1 + A G COAD 39868359 + 39868339 39868379 41 ACCCTCCAGCTGTGGAGAACTACCCACCTCCACCAGCTCCA ACCCTCCAGCTGTGGAGAACTGCCCACCTCCACCAGCTCCA < 41bp 0.854656367409166 0.456018710375293 0.48097694 0.2792884 prediction 0.709312734818332 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868359 chr19:39868360 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_3692 0 0 1 0 0 Ribosome 0.438149025255316 0.43848705002236 0 0 hPsi_site_9109 iPseU_CNN:0;iRNA_PseU:0 9110 chr20 1286091 1286091 1 + A G rs144338745 1286090 + 1286070 1286110 41 GCTTCCCTGCCAGCAACACCTATGAGAAGCTGCTGTGTGGC GCTTCCCTGCCAGCAACACCTGTGAGAAGCTGCTGTGTGGC < 41bp 0.854656158578343 0.467637864591683 0.24237847 0.21741527 prediction 0.709312317156686 Functional Loss - SNPH ENSG00000101298 CDS Human protein_coding chr20:1286090 chr20:1286091 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3693 0 0 0 0 0 Endoplasmic reticulum 0.438725586703934 0.438729150282133 0 0 hPsi_site_9110 iPseU_CNN:0;iRNA_PseU:0 9111 chr20 19937330 19937330 1 + A G HNSC 19937329 + 19937309 19937349 41 CCTGTGCCCGGGACTCAGGCTATGACAGCCTCTCCAACAGG CCTGTGCCCGGGACTCAGGCTGTGACAGCCTCTCCAACAGG < 41bp 0.854638653511012 0.457154858162881 0.27194926 0.24855363 prediction 0.709277307022024 Functional Loss - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19937329 chr20:19937330 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3694 0 0 0 0 1 Nucleus 0.438736710418292 0.438723485299986 0 0 hPsi_site_9111 iPseU_CNN:0;iRNA_PseU:0 9112 chr12 5603796 5603796 1 + A G SKCM 5603795 + 5603775 5603815 41 GAACATCACGGCGGAAACGGTACGCGGAGCATAAGAGTCAC GAACATCACGGCGGAAACGGTGCGCGGAGCATAAGAGTCAC < 41bp 0.854636225338801 0.457266348760927 0.9761889 0.38799742 prediction 0.709272450677602 Functional Loss - NTF3 ENSG00000185652 CDS Human protein_coding chr12:5603795 chr12:5603796 nonsynonymous SNV 0.957 3 22 hPsi_associated_SNPs_3695 0 0 0 0 0 exosome 0.438727269661142 0.43871927646556 0.9523778 0 hPsi_site_9112 iPseU_CNN:0.9523778;iRNA_PseU:0 9113 chr5 33467765 33467765 1 + A G UCEC 33467764 + 33467744 33467784 41 TTCTGAAACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCC TTCTGAAACTATCGAGCGGCTGCAGCAGCTCAAAGAGTTCC < 41bp 0.854631173219267 0.478256269206476 0.5426198 0.3253156 prediction 0.709262346438533 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33467764 chr5:33467765 synonymous SNV . 0 22 hPsi_associated_SNPs_3696 0 0 1 0 0 Nucleus 0.438474841532894 0.438901075440343 0.0852396 0 hPsi_site_9113 iPseU_CNN:0.0852396;iRNA_PseU:0 9114 chr11 114316770 114316770 1 + A G LUAD 114316769 + 114316749 114316789 41 AGTTCATGAAACATCTTCATTATAGAATAATTGATGTGAGC AGTTCATGAAACATCTTCATTGTAGAATAATTGATGTGAGC < 41bp 0.854626242269363 0.48207953965578 0.2839527 0.2819017 prediction 0.709252484538726 Functional Loss - REXO2 ENSG00000076043 CDS Human protein_coding chr11:114316769 chr11:114316770 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3697 0 0 1 0 2 Ribosome 0.438903814330774 0.445828749674678 0 0 hPsi_site_9114 iPseU_CNN:0;iRNA_PseU:0 9115 chr14 24626825 24626825 1 + A G LUSC 24626824 + 24626804 24626844 41 ACCAGTTCTGCAGCGGCTGCTACAATGCCTTTTACGCCAAG ACCAGTTCTGCAGCGGCTGCTGCAATGCCTTTTACGCCAAG < 41bp 0.854621926965312 0.468773242410918 0.7649888 0.7102673 prediction 0.709243853930624 Functional Loss - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24626824 chr14:24626825 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3698 0 0 1 0 2 Ribosome 0.437935522231428 0.439032676349357 0.109443 0 hPsi_site_9115 iPseU_CNN:0.109443;iRNA_PseU:0 9116 chrX 23412032 23412032 1 + A G LUSC 23412031 + 23412011 23412051 41 AGTGCATGGGGTAGCTATTTTACAGAGTTACCTCTGCTATA AGTGCATGGGGTAGCTATTTTGCAGAGTTACCTCTGCTATA < 41bp 0.854615752325787 0.479008118943798 0.69240093 0.36842456 prediction 0.709231504651574 Functional Loss - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23412031 chrX:23412032 synonymous SNV . 0 22 hPsi_associated_SNPs_3699 0 0 0 0 0 exosome 0.438718800204358 0.438717997481575 0.38480186 0 hPsi_site_9116 iPseU_CNN:0.38480186;iRNA_PseU:0 9117 chr13 41656881 41656881 1 + A G rs115960433 41656880 + 41656860 41656900 41 TTCCAAGCACTGAAAATGAGTATGTATCAACTTCAGAAGCT TTCCAAGCACTGAAAATGAGTGTGTATCAACTTCAGAAGCT < 41bp 0.869223647839083 0.5146266145154 0.21412238 0.2037338 prediction 0.709194066647365 Functional Loss - WBP4 ENSG00000120688 CDS Human protein_coding chr13:41656880 chr13:41656881 nonsynonymous SNV 0.777 0 22 hPsi_associated_SNPs_3700 0 0 0 0 1 Cytosol 0.438362265441386 0.436354784787992 0 0 hPsi_site_9117 iPseU_CNN:0;iRNA_PseU:0 9118 chr1 64095111 64095111 1 + A G rs855314 64095110 + 64095090 64095130 41 TCCTAGATCGGTCGCTTGGTTATCGGACAGAATGGAATCCT TCCTAGATCGGTCGCTTGGTTGTCGGACAGAATGGAATCCT < 41bp 0.886128245812664 0.531536728509525 0.312733 0.19938761 prediction 0.709183034606278 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64095110 chr1:64095111 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3701 3 0 1 0 1 Ribosome 0.442174469798746 0.436989926554828 0 0 hPsi_site_9118 iPseU_CNN:0;iRNA_PseU:0 9119 chr1 162569085 162569085 1 + A G CESC 162569084 + 162569064 162569104 41 TTAGAAAGTTATGTGGCAGATAAAGAATTCCATGCACCTCT TTAGAAAGTTATGTGGCAGATGAAGAATTCCATGCACCTCT < 41bp 0.856809549576314 0.502252538788081 0.37553108 0.27568334 prediction 0.709114021576466 Functional Loss - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162569084 chr1:162569085 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3702 0 0 1 0 1 Ribosome 0.438717002897175 0.438706539084184 0 0 hPsi_site_9119 iPseU_CNN:0;iRNA_PseU:0 9120 chr19 41822696 41822696 1 + A G PRAD 41822695 + 41822675 41822715 41 GCCCGGCCCCGCACCCTGCGTACCCGCCTGCGTAACCGGCG GCCCGGCCCCGCACCCTGCGTGCCCGCCTGCGTAACCGGCG < 41bp 0.886948006090491 0.532416132527644 0.86663187 0.2839076 prediction 0.709063747125693 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822695 chr19:41822696 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_3703 0 0 1 0 1 chromatin 0.438719791761674 0.438717916653077 0.73326374 0 hPsi_site_9120 iPseU_CNN:0.73326374;iRNA_PseU:0 9121 chrX 37028112 37028112 1 + A G KIRC 37028111 + 37028091 37028131 41 GGCACCTCCTGAGAGTAGCGTATCTCATCTCCGCCCAGAGC GGCACCTCCTGAGAGTAGCGTGTCTCATCTCCGCCCAGAGC < 41bp 0.854525807013153 0.477200666685503 0.69637054 0.3401237 prediction 0.709051614026307 Functional Loss - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37028111 chrX:37028112 synonymous SNV . 0 22 hPsi_associated_SNPs_3704 0 0 0 0 0 unknown 0.439216806635966 0.438641557360266 0.39274108 0 hPsi_site_9121 iPseU_CNN:0.39274108;iRNA_PseU:0 9122 chr16 2811955 2811955 1 + A G STAD 2811954 + 2811934 2811974 41 CGGGATAAATCACATTCTCATACCCCCTCCCGTAGGATGGG CGGGATAAATCACATTCTCATGCCCCCTCCCGTAGGATGGG < 41bp 0.854486745807374 0.468791001187487 0.3414079 0.22981337 prediction 0.708973491614748 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811954 chr16:2811955 nonsynonymous SNV 0.558 0 22 hPsi_associated_SNPs_3705 0 0 1 0 0 Nucleus 0.438723939193331 0.438718925843993 0 0 hPsi_site_9122 iPseU_CNN:0;iRNA_PseU:0 9123 chr11 45925671 45925671 1 + A G GBM 45925670 + 45925650 45925690 41 CCCGGGGTGTCTTTCCTGCCTATTACGCCATCGAGGTCACC CCCGGGGTGTCTTTCCTGCCTGTTACGCCATCGAGGTCACC < 41bp 0.854475613872997 0.463345651979281 0.34698772 0.26963812 prediction 0.708951227745995 Functional Loss - MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45925670 chr11:45925671 nonsynonymous SNV 0.974 2 22 hPsi_associated_SNPs_3706 0 0 0 0 1 Endoplasmic reticulum 0.4387185929812 0.438718592947456 0 0 hPsi_site_9123 iPseU_CNN:0;iRNA_PseU:0 9124 chr4 69078177 69078177 1 + A G UCEC 69078176 + 69078156 69078196 41 CATCCATAGTGACACAGATGTACAGGAAGCCATGACTGGTC CATCCATAGTGACACAGATGTGCAGGAAGCCATGACTGGTC < 41bp 0.854460410740647 0.48755053304223 0.6041756 0.25156802 prediction 0.708920821481295 Functional Loss - FTLP10;TMPRSS11BNL ENSG00000226894 CDS Human other chr4:69078176 chr4:69078177 synonymous SNV . 0 22 hPsi_associated_SNPs_3707 0 0 0 3 0 unknown 0.438722775165777 0.438728618818301 0.2083512 0 hPsi_site_9124 iPseU_CNN:0.2083512;iRNA_PseU:0 9125 chr6 90605630 90605630 1 + A G UCEC 90605629 + 90605609 90605649 41 TGGGCACAGAACATCAATGGTAAGACAGGCAGCCCTACCGA TGGGCACAGAACATCAATGGTGAGACAGGCAGCCCTACCGA < 41bp 0.867476486346223 0.513047187047522 0.67121184 0.40771663 prediction 0.708858598597401 Functional Loss - GJA10 ENSG00000135355 CDS Human protein_coding chr6:90605629 chr6:90605630 synonymous SNV . 0 22 hPsi_associated_SNPs_3708 0 0 0 0 0 unknown 0.438717504524712 0.438720411138591 0.34242368 0 hPsi_site_9125 iPseU_CNN:0.34242368;iRNA_PseU:0 9126 chr11 71939450 71939450 1 + A G UCEC 71939449 + 71939429 71939469 41 TGGGTGAGCTCATCGGCCTGTACGCCCAGCCCAACCAGGGC TGGGTGAGCTCATCGGCCTGTGCGCCCAGCCCAACCAGGGC < 41bp 0.889526699034332 0.535100797134783 0.847949 0.19633487 prediction 0.708851803799098 Functional Loss - INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71939449 chr11:71939450 nonsynonymous SNV 0.494 4 22 hPsi_associated_SNPs_3709 0 0 1 0 2 Cytosol 0.438718592991286 0.438718592797621 0.695898 0 hPsi_site_9126 iPseU_CNN:0.695898;iRNA_PseU:0 9127 chr7 134849342 134849342 1 + A G STAD 134849341 + 134849321 134849361 41 CCAACCTGAGAATCGGCTTCTATAACTTCTGCCTGTGGAAT CCAACCTGAGAATCGGCTTCTGTAACTTCTGCCTGTGGAAT < 41bp 0.881969084813233 0.527574957513447 0.3707008 0.28052062 prediction 0.708788254599573 Functional Loss - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849341 chr7:134849342 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3710 0 0 1 0 0 chromatin 0.438718740526789 0.438717336919318 0 0 hPsi_site_9127 iPseU_CNN:0;iRNA_PseU:0 9128 chr4 89649770 89649770 1 + A G LIHC 89649769 + 89649749 89649789 41 TTATGTGCTTATATTCACTGTATTCTTCAGCCATAGGAGTG TTATGTGCTTATATTCACTGTGTTCTTCAGCCATAGGAGTG < 41bp 0.874954970759299 0.520653670018617 0.3787035 0.2546555 prediction 0.708602601481365 Functional Loss - FAM13A ENSG00000138640 CDS Human protein_coding chr4:89649769 chr4:89649770 nonsynonymous SNV 0.880 4 22 hPsi_associated_SNPs_3711 0 0 0 0 0 Nucleus 0.438769218719254 0.439231120144307 0 0 hPsi_site_9128 iPseU_CNN:0;iRNA_PseU:0 9129 chr11 111851544 111851544 1 + A G UCEC 111851543 + 111851523 111851563 41 GAGAAGGCAGATTTTGTGATTATTCCCGCTGAAGGAATAGA GAGAAGGCAGATTTTGTGATTGTTCCCGCTGAAGGAATAGA < 41bp 0.854201234866489 0.46155256007716 0.36865807 0.27870637 prediction 0.708402469732977 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111851543 chr11:111851544 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_3712 0 0 1 0 2 Ribosome 0.43878620022017 0.438723065431295 0 0 hPsi_site_9129 iPseU_CNN:0;iRNA_PseU:0 9130 chr5 7892937 7892937 1 + A G rs41283145 7892936 + 7892916 7892956 41 GTTCTGCGGAAGGGAGTATGTACAGGCTGGCTGGCCTTGTT GTTCTGCGGAAGGGAGTATGTGCAGGCTGGCTGGCCTTGTT < 41bp 0.8541974317594 0.462389051584383 0.54308724 0.23440635 prediction 0.7083948635188 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7892936 chr5:7892937 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_3713 0 0 1 1 2 Nucleus 0.439217995058011 0.438718768096359 0.0861744799999999 0 hPsi_site_9130 iPseU_CNN:0.0861744799999999;iRNA_PseU:0 9131 chr14 75475839 75475839 1 + A G TGCT 75475838 + 75475818 75475858 41 TTGGTGGGAATGCACCTTCCTACATCTACCGCCTGATGAGT TTGGTGGGAATGCACCTTCCTGCATCTACCGCCTGATGAGT < 41bp 0.854195945392068 0.475669472697366 0.56793666 0.28274357 prediction 0.708391890784137 Functional Loss - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75475838 chr14:75475839 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3714 0 0 1 0 0 Ribosome 0.438718592995112 0.438718592995094 0.13587332 0 hPsi_site_9131 iPseU_CNN:0.13587332;iRNA_PseU:0 9132 chr1 248224348 248224348 1 + A G UCEC 248224347 + 248224327 248224367 41 CATCTATGGCCTATGATCGTTACATTGCTATTTGCTTTCCT CATCTATGGCCTATGATCGTTGCATTGCTATTTGCTTTCCT < 41bp 0.854136522953695 0.498672900973318 0.83573806 0.60156536 prediction 0.70827304590739 Functional Loss - OR2L3 ENSG00000198128 CDS Human protein_coding chr1:248224347 chr1:248224348 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_3715 0 0 0 0 0 unknown 0.4386573170899 0.438959141633783 0.4683454 0 hPsi_site_9132 iPseU_CNN:0.4683454;iRNA_PseU:0 9133 chr12 5603748 5603748 1 + A G STAD 5603747 + 5603727 5603767 41 CCTTGTATCTCATGGAGGATTACGTGGGCAGCCCCGTGGTG CCTTGTATCTCATGGAGGATTGCGTGGGCAGCCCCGTGGTG < 41bp 0.884369092814218 0.530235430980632 0.7149991 0.32099783 prediction 0.708267323667172 Functional Loss - NTF3 ENSG00000185652 CDS Human protein_coding chr12:5603747 chr12:5603748 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_3716 0 0 0 0 0 exosome 0.438772225616133 0.438694465941556 0.4299982 0 hPsi_site_9133 iPseU_CNN:0.4299982;iRNA_PseU:0 9134 chr19 35941968 35941968 1 + A G rs144374935 35941967 + 35941947 35941987 41 AACCCCGTCTCTACTAAAAATACAAAAAAATTAGCTGGGCA AACCCCGTCTCTACTAAAAATGCAAAAAAATTAGCTGGGCA < 41bp 0.854128840287396 0.497455136228235 0.27316654 0.26097363 prediction 0.708257680574792 Functional Loss - FFAR2 ENSG00000126262 UTR3 Human protein_coding chr19:35941967 chr19:35941968 . . 0 22 hPsi_associated_SNPs_3717 0 0 0 1 0 exosome 0.424390188530122 0.438456351369114 0 0 hPsi_site_9134 iPseU_CNN:0;iRNA_PseU:0 9135 chr2 88472737 88472737 1 + A G rs151033743 88472736 + 88472716 88472756 41 AGGGGGCCCTCTTCTCTGGCTATGCACCTGACGGGGGCCTC AGGGGGCCCTCTTCTCTGGCTGTGCACCTGACGGGGGCCTC < 41bp 0.872174067499846 0.518056510138142 0.47920036 0.24289349 prediction 0.708235114723409 Functional Loss - THNSL2 ENSG00000144115 CDS Human protein_coding chr2:88472736 chr2:88472737 nonsynonymous SNV 0.836 3 22 hPsi_associated_SNPs_3718 0 0 0 0 0 exosome 0.438718588486716 0.438718592464296 0 0 hPsi_site_9135 iPseU_CNN:0;iRNA_PseU:0 9136 chr20 24937978 24937978 1 + A G HNSC 24937977 + 24937957 24937997 41 GCCAGGATTTCCTAAAACAATAAAGACCAATGACCCAGGAG GCCAGGATTTCCTAAAACAATGAAGACCAATGACCCAGGAG < 41bp 0.854113459541039 0.474488499586165 0.37791443 0.29528964 prediction 0.708226919082078 Functional Loss - CST7 ENSG00000077984 CDS Human protein_coding chr20:24937977 chr20:24937978 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_3719 0 0 0 0 1 exosome 0.438718593809106 0.43871843720342 0 0 hPsi_site_9136 iPseU_CNN:0;iRNA_PseU:0 9137 chr5 150037389 150037389 1 + A G rs190041650 150037388 + 150037368 150037408 41 TCCCCGGGTCCCTGTCATGCTACTTTCTCCATCCCAGTTCA TCCCCGGGTCCCTGTCATGCTGCTTTCTCCATCCCAGTTCA < 41bp 0.854110281748683 0.495561800888086 0.6255683 0.28547204 prediction 0.708220563497366 Functional Loss - SYNPO ENSG00000171992 UTR3 Human protein_coding chr5:150037388 chr5:150037389 . . 0 22 hPsi_associated_SNPs_3720 0 0 1 1 0 Endoplasmic reticulum 0.435811635174287 0.438717442663106 0.2511366 0 hPsi_site_9137 iPseU_CNN:0.2511366;iRNA_PseU:0 9138 chr1 220287740 220287740 1 + A G rs11800305 220287739 + 220287719 220287759 41 GACAGGCGGCCATATTGGTGTATATCAAGGCAAAGAGTTTG GACAGGCGGCCATATTGGTGTGTATCAAGGCAAAGAGTTTG < 41bp 0.854101468056999 0.468795045697114 0.59132147 0.60192925 prediction 0.708202936113997 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220287739 chr1:220287740 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3721 1 0 1 0 2 Ribosome 0.438481043847708 0.438705570880112 0 0 hPsi_site_9138 iPseU_CNN:0;iRNA_PseU:0 9139 chr5 33457395 33457395 1 + A G CESC 33457394 + 33457374 33457414 41 TACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAGAAT TACTGGGAAGGCAAAGCAGATGTGGAGACTCTCCAGAGAAT < 41bp 0.884407951533986 0.530316489105609 0.29533076 0.25586253 prediction 0.708182924856754 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33457394 chr5:33457395 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3722 0 0 1 0 1 Nucleus 0.438720236590068 0.438719917837297 0 0 hPsi_site_9139 iPseU_CNN:0;iRNA_PseU:0 9140 chr19 15132682 15132682 1 + A G HNSC 15132681 + 15132661 15132701 41 ACAGACCCCTGGTTCGCATGTACCAGAGACACGTGGGCACC ACAGACCCCTGGTTCGCATGTGCCAGAGACACGTGGGCACC < 41bp 0.854084938100678 0.461719867873447 0.91914916 0.31003186 prediction 0.708169876201356 Functional Loss - CCDC105 ENSG00000160994 CDS Human protein_coding chr19:15132681 chr19:15132682 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3723 0 0 0 0 1 unknown 0.438732060238131 0.438726909167764 0.83829832 0 hPsi_site_9140 iPseU_CNN:0.83829832;iRNA_PseU:0 9141 chr22 30811777 30811777 1 + A G ESCA 30811776 + 30811756 30811796 41 AAGGAGGTTTTACTGAAACATATCAGCCCTGACCAGGTGCC AAGGAGGTTTTACTGAAACATGTCAGCCCTGACCAGGTGCC < 41bp 0.883338204186134 0.529256333977998 0.28044802 0.2593589 prediction 0.708163740416272 Functional Loss - SEC14L2 ENSG00000100003;ENSG00000249590 CDS Human other chr22:30811776 chr22:30811777 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_3724 0 0 0 2 2 chromatin 0.438718607315995 0.438718594726881 0 0 hPsi_site_9141 iPseU_CNN:0;iRNA_PseU:0 9142 chr4 88989079 88989079 1 + A G LUSC 88989078 + 88989058 88989098 41 GGATTTGGATCACAGTTCTTTACCACGTCCCATGAGCAGCC GGATTTGGATCACAGTTCTTTGCCACGTCCCATGAGCAGCC < 41bp 0.892007395778798 0.537941081355488 0.6994542 0.3055737 prediction 0.708132628846622 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88989078 chr4:88989079 synonymous SNV . 0 22 hPsi_associated_SNPs_3725 1 0 1 0 1 Endoplasmic reticulum 0.438703065792337 0.438724038108849 0.3989084 0 hPsi_site_9142 iPseU_CNN:0.3989084;iRNA_PseU:0 9143 chr14 55818909 55818909 1 + A G LUAD 55818908 + 55818888 55818928 41 AGTTTAGTGGCCCTTAAATGTACCTGCTGCTATTTCAAGTT AGTTTAGTGGCCCTTAAATGTGCCTGCTGCTATTTCAAGTT < 41bp 0.854048784546114 0.484793289037392 0.25109938 0.17313063 prediction 0.708097569092228 Functional Loss - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55818908 chr14:55818909 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3726 0 0 1 0 0 Nucleus 0.438718798408737 0.438716823702801 0 0 hPsi_site_9143 iPseU_CNN:0;iRNA_PseU:0 9144 chr10 13154533 13154533 1 + A G STAD 13154532 + 13154512 13154552 41 CAGGACCCAGGTGGTGAGGCTACAAGCAGAGAAGGCAGACC CAGGACCCAGGTGGTGAGGCTGCAAGCAGAGAAGGCAGACC < 41bp 0.854046753743454 0.453693234320523 0.30331838 0.19049543 prediction 0.708093507486909 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13154532 chr10:13154533 synonymous SNV . 0 22 hPsi_associated_SNPs_3727 0 0 1 0 1 nucleoplasm 0.43871245697413 0.438718485836811 0 0 hPsi_site_9144 iPseU_CNN:0;iRNA_PseU:0 9145 chr1 193038458 193038458 1 + A G rs561745848 193038457 + 193038437 193038477 41 AGAACCACAAAGCAAGAGCCTATGCTCTTTGCACTTGCCAT AGAACCACAAAGCAAGAGCCTGTGCTCTTTGCACTTGCCAT < 41bp 0.875386825013477 0.52137622523462 0.31117016 0.25326097 prediction 0.708021199557714 Functional Loss - TROVE2 ENSG00000116747 CDS Human protein_coding chr1:193038457 chr1:193038458 nonsynonymous SNV 0.967 0 22 hPsi_associated_SNPs_3728 0 0 1 0 0 Ribosome 0.438718611589358 0.438718768723469 0 0 hPsi_site_9145 iPseU_CNN:0;iRNA_PseU:0 9146 chr7 143632845 143632845 1 + A G UCEC 143632844 + 143632824 143632864 41 CCCATGTGCACTAACAAGTTTATTGATCACATATCCTGTGA CCCATGTGCACTAACAAGTTTGTTGATCACATATCCTGTGA < 41bp 0.853996576610431 0.483941334320083 0.3423695 0.29178005 prediction 0.707993153220862 Functional Loss - OR2F2 ENSG00000221910 CDS Human protein_coding chr7:143632844 chr7:143632845 nonsynonymous SNV 0.157 0 22 hPsi_associated_SNPs_3729 0 0 0 0 0 unknown 0.438286175752809 0.451132920841651 0 0 hPsi_site_9146 iPseU_CNN:0;iRNA_PseU:0 9147 chr14 77297613 77297613 1 + A G STAD 77297612 + 77297592 77297632 41 GGCCTGCAAGCTGATGGGTGTAGTGCCTGTCTCCTACTTCA GGCCTGCAAGCTGATGGGTGTGGTGCCTGTCTCCTACTTCA < 41bp 0.853980377999485 0.459024494940899 0.85937506 0.32827407 prediction 0.707960755998971 Functional Loss - LRRC74A ENSG00000100565 CDS Human protein_coding chr14:77297612 chr14:77297613 synonymous SNV . 0 22 hPsi_associated_SNPs_3730 0 0 0 0 0 exosome 0.438837869323951 0.438718613329256 0.71875012 0 hPsi_site_9147 iPseU_CNN:0.71875012;iRNA_PseU:0 9148 chr1 29069431 29069431 1 + A G UCEC 29069430 + 29069410 29069450 41 GCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGCTTC GCTGTTGGTAGCGGGTCCATTGCTAGTAACATCGTGGCTTC < 41bp 0.877406072455032 0.523435793300408 0.44459912 0.24491131 prediction 0.707940558309248 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069430 chr1:29069431 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3731 0 0 1 0 0 Cytosol 0.438718562993566 0.438718454467343 0 0 hPsi_site_9148 iPseU_CNN:0;iRNA_PseU:0 9149 chr17 27014370 27014370 1 + A G LUAD 27014369 + 27014349 27014389 41 AACGCCTTGTACTGTGAATTTATCAACCGAGTCAATGAGGT AACGCCTTGTACTGTGAATTTGTCAACCGAGTCAATGAGGT < 41bp 0.885350534122538 0.531408394376942 0.55859166 0.32583624 prediction 0.707884279491193 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27014369 chr17:27014370 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3732 0 0 1 0 1 Cytosol 0.435744997170836 0.437295938959155 0.11718332 0 hPsi_site_9149 iPseU_CNN:0.11718332;iRNA_PseU:0 9150 chr12 54422673 54422673 1 + A G UCEC 54422672 + 54422652 54422692 41 AGAAAGCCAGTATCCAGATTTACCCCTGGATGCAGCGAATG AGAAAGCCAGTATCCAGATTTGCCCCTGGATGCAGCGAATG < 41bp 0.864873358526055 0.510937999385023 0.30778664 0.15212533 prediction 0.707870718282064 Functional Loss - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54422672 chr12:54422673 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3733 0 0 1 0 1 exosome 0.438748130996119 0.438720875736145 0 0 hPsi_site_9150 iPseU_CNN:0;iRNA_PseU:0 9151 chr11 66249769 66249769 1 + A G COAD 66249768 + 66249748 66249788 41 TGTCACCCACAGAGCGCCTCTATGCCTACCACCTGTCCCGT TGTCACCCACAGAGCGCCTCTGTGCCTACCACCTGTCCCGT < 41bp 0.853923187211565 0.455867998865611 0.44122666 0.3219019 prediction 0.707846374423129 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249768 chr11:66249769 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3734 0 0 1 0 0 Nucleus 0.447372226412055 0.463801957983155 0 0 hPsi_site_9151 iPseU_CNN:0;iRNA_PseU:0 9152 chr14 74523869 74523869 1 + A G rs3742809 74523868 + 74523848 74523888 41 GATGAAAGTAAGCTTCAAGATAAAATCTTCATCACCCAGCA GATGAAAGTAAGCTTCAAGATGAAATCTTCATCACCCAGCA < 41bp 0.872165683271949 0.518245758773679 0.34276527 0.22642908 prediction 0.70783984899654 Functional Loss - BBOF1 ENSG00000119636 CDS Human protein_coding chr14:74523868 chr14:74523869 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_3735 0 0 0 0 2 chromatin 0.438718666403506 0.438747044863589 0 0 hPsi_site_9152 iPseU_CNN:0;iRNA_PseU:0 9153 chr1 228246811 228246811 1 + A G LUSC 228246810 + 228246790 228246830 41 GTGACTTCCTCAAGGACAAGTACGACAGCGCCTCGGAGATG GTGACTTCCTCAAGGACAAGTGCGACAGCGCCTCGGAGATG < 41bp 0.853917248155113 0.472876948052488 0.6678187 0.23585859 prediction 0.707834496310226 Functional Loss - WNT3A ENSG00000154342 CDS Human protein_coding chr1:228246810 chr1:228246811 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_3736 0 0 0 0 0 exosome 0.439058692120885 0.43915523110831 0.3356374 0 hPsi_site_9153 iPseU_CNN:0.3356374;iRNA_PseU:0 9154 chr13 53241013 53241013 1 + A G rs187331422 53241012 + 53240992 53241032 41 AAACTGGAACTTCTTCATCCTATAATACCAGAACAGAGCAC AAACTGGAACTTCTTCATCCTGTAATACCAGAACAGAGCAC < 41bp 0.879842337710446 0.525931160949298 0.28387624 0.25085357 prediction 0.707822353522296 Functional Loss - SUGT1 ENSG00000165416 CDS Human protein_coding chr13:53241012 chr13:53241013 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_3737 0 0 1 0 2 Nucleus 0.438733008494055 0.438765322480971 0 0 hPsi_site_9154 iPseU_CNN:0;iRNA_PseU:0 9155 chrX 70389354 70389354 1 + A G rs144914894 70389353 + 70389333 70389373 41 ACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCCACAT ACCAAAGTGCCGCCTCCGGATGCCACCCACAGCTCCCACAT < 41bp 0.886678121331643 0.532819509093968 0.82490414 0.50653684 prediction 0.70771722447535 Functional Loss - NLGN3 ENSG00000196338 CDS Human protein_coding chrX:70389353 chrX:70389354 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3738 2 0 0 0 0 exosome 0.437764317425223 0.437033481999253 0.6367346 0 hPsi_site_9155 iPseU_CNN:0.6367346;iRNA_PseU:0 9156 chr7 143001806 143001806 1 + A G UCEC 143001805 + 143001785 143001825 41 ACACCAAACGAGGTTCCTGGTACATCGAGGCTCTTGCTCAA ACACCAAACGAGGTTCCTGGTGCATCGAGGCTCTTGCTCAA < 41bp 0.894626959816757 0.54079017288573 0.70144475 0.3597766 prediction 0.707673573862053 Functional Loss - CASP2 ENSG00000106144 CDS Human protein_coding chr7:143001805 chr7:143001806 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3739 0 0 1 1 2 Nucleus 0.438210413258596 0.438144272980489 0.4028895 0 hPsi_site_9156 iPseU_CNN:0.4028895;iRNA_PseU:0 9157 chr7 30821639 30821639 1 + A G UCEC 30821638 + 30821618 30821658 41 GCCTTGAACTCATCACCAGATACTTTCTGGATCACTTTGGA GCCTTGAACTCATCACCAGATGCTTTCTGGATCACTTTGGA < 41bp 0.853805438982776 0.462313322663035 0.30773762 0.16921088 prediction 0.707610877965553 Functional Loss - MINDY4 ENSG00000106125 CDS Human protein_coding chr7:30821638 chr7:30821639 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3740 0 0 1 0 1 unknown 0.432565265977904 0.405037617815719 0 0 hPsi_site_9157 iPseU_CNN:0;iRNA_PseU:0 9158 chr21 47711360 47711360 1 + A G UCEC 47711359 + 47711339 47711379 41 AGTGTAAAGAAAATGAAGATTACAATGACGTCCTGACTGTA AGTGTAAAGAAAATGAAGATTGCAATGACGTCCTGACTGTA < 41bp 0.864240364235292 0.510438729637838 0.2744453 0.21311757 prediction 0.707603269194908 Functional Loss - YBEY ENSG00000182362 CDS Human protein_coding chr21:47711359 chr21:47711360 nonsynonymous SNV 0.360 3 22 hPsi_associated_SNPs_3741 0 0 1 0 1 chromatin 0.43017136603145 0.438909814300194 0 0 hPsi_site_9158 iPseU_CNN:0;iRNA_PseU:0 9159 chr17 80393606 80393606 1 + A G UCEC 80393605 + 80393585 80393625 41 GGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCA GGAGGCCTCGCGCCGGTGGCTGCAGCAAGAGCAGAACAGCA < 41bp 0.890519772792633 0.536726578443765 0.39313263 0.24598327 prediction 0.707586388697736 Functional Loss - HEXDC ENSG00000169660 CDS Human protein_coding chr17:80393605 chr17:80393606 synonymous SNV . 0 22 hPsi_associated_SNPs_3742 0 0 1 0 1 Ribosome 0.438699761601548 0.438672988163644 0 0 hPsi_site_9159 iPseU_CNN:0;iRNA_PseU:0 9160 chr15 22383245 22383245 1 + A G BLCA 22383244 + 22383224 22383264 41 TTGGACCTGCTATCTTCATCTACATGTGCCCTTTCAGGGCC TTGGACCTGCTATCTTCATCTGCATGTGCCCTTTCAGGGCC < 41bp 0.876540836247529 0.522793358579736 0.34231865 0.24200976 prediction 0.707494955335586 Functional Loss - OR4N4 ENSG00000183706 CDS Human protein_coding chr15:22383244 chr15:22383245 nonsynonymous SNV 0.003 4 22 hPsi_associated_SNPs_3743 0 0 0 0 0 unknown 0.438718592969104 0.438718593027798 0 0 hPsi_site_9160 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 9161 chr5 134332186 134332186 1 + A G UCEC 134332185 + 134332165 134332205 41 GCATCCTCAAGCTTATCGGCTATAGCCAGGGCATCCGGGTG GCATCCTCAAGCTTATCGGCTGTAGCCAGGGCATCCGGGTG < 41bp 0.888649097893467 0.534922076090807 0.82693684 0.47099674 prediction 0.707454043605319 Functional Loss - CATSPER3 ENSG00000152705 CDS Human protein_coding chr5:134332185 chr5:134332186 nonsynonymous SNV 0.032 5 22 hPsi_associated_SNPs_3744 0 0 0 0 1 cytosol 0.438720007087647 0.438718596015292 0.65387368 0 hPsi_site_9161 iPseU_CNN:0.65387368;iRNA_PseU:0 9162 chr4 115544143 115544143 1 + A G LGG 115544142 + 115544122 115544162 41 TTATGTTTGAAAGCCATATGTACATTTTCAAGACGCTAGCC TTATGTTTGAAAGCCATATGTGCATTTTCAAGACGCTAGCC < 41bp 0.880281227628178 0.52658233197351 0.20630246 0.15619725 prediction 0.707397791309337 Functional Loss - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544142 chr4:115544143 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3745 0 0 1 0 0 Ribosome 0.438718533641943 0.438708341954495 0 0 hPsi_site_9162 iPseU_CNN:0;iRNA_PseU:0 9163 chr12 6838552 6838552 1 + A G OV 6838551 + 6838531 6838571 41 ACCAGCGGCTCGAGGTTGACTACAGCATCGGGCGGGACATC ACCAGCGGCTCGAGGTTGACTGCAGCATCGGGCGGGACATC < 41bp 0.885228825011104 0.531559099660275 0.321505 0.20553336 prediction 0.707339450701658 Functional Loss - COPS7A ENSG00000111652 CDS Human protein_coding chr12:6838551 chr12:6838552 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3746 0 0 1 0 1 Cytosol 0.437722081129075 0.421543167770911 0 0 hPsi_site_9163 iPseU_CNN:0;iRNA_PseU:0 9164 chr19 47111501 47111501 1 + A G HNSC 47111500 + 47111480 47111520 41 GACAAGGATGGAGATGGCACTATCACCACCAAGGAGTTGGG GACAAGGATGGAGATGGCACTGTCACCACCAAGGAGTTGGG < 41bp 0.882872142224974 0.529216010702767 0.2661609 0.20776972 prediction 0.707312263044414 Functional Loss - CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111500 chr19:47111501 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3747 0 0 1 0 1 Ribosome 0.438163437883775 0.437743480585919 0 0 hPsi_site_9164 iPseU_CNN:0;iRNA_PseU:0 9165 chr22 18609260 18609260 1 + A G UCEC 18609259 + 18609239 18609279 41 CCAAGCTGGAGTTTGCCATCTACCCAGCCCCCCAGGTCTCT CCAAGCTGGAGTTTGCCATCTGCCCAGCCCCCCAGGTCTCT < 41bp 0.893370756658316 0.539722621868231 0.4431545 0.2638804 prediction 0.70729626958017 Functional Loss - TUBA8 ENSG00000183785 CDS Human protein_coding chr22:18609259 chr22:18609260 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3748 0 0 0 0 0 exosome 0.43871859301893 0.438718593027293 0 0 hPsi_site_9165 iPseU_CNN:0;iRNA_PseU:0 9166 chr11 55861386 55861386 1 + A G STAD 55861385 + 55861365 55861405 41 AGAAATGGTGAGCTTTGTCTTAGCTGGATTCACTCTTCTTA AGAAATGGTGAGCTTTGTCTTGGCTGGATTCACTCTTCTTA < 41bp 0.853581872198408 0.498767526488511 0.58199626 0.2567861 prediction 0.707163744396816 Functional Loss - OR8I2 ENSG00000172154 CDS Human protein_coding chr11:55861385 chr11:55861386 synonymous SNV . 0 22 hPsi_associated_SNPs_3749 0 0 0 0 0 unknown 0.438718593606213 0.438718581101602 0.16399252 0 hPsi_site_9166 iPseU_CNN:0.16399252;iRNA_PseU:0 9167 chr3 9976159 9976159 1 + A G rs279552 9976158 + 9976138 9976178 41 CCGAAGGGCCTAGTCCCAGCTATGCTCTGGGGCCTCAGCCT CCGAAGGGCCTAGTCCCAGCTGTGCTCTGGGGCCTCAGCCT < 41bp 0.885750633788954 0.53216972218922 0.528179 0.311053 prediction 0.707161823199469 Functional Loss - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976158 chr3:9976159 nonsynonymous SNV 0.512 0 22 hPsi_associated_SNPs_3750 2 0 1 1 1 chromatin 0.438718620657151 0.438718593116817 0.0563579999999999 0 hPsi_site_9167 iPseU_CNN:0.0563579999999999;iRNA_PseU:0 9168 chr13 73320157 73320157 1 + A G STAD 73320156 + 73320136 73320176 41 AGCATAACTAGTCCTTCGCCTATTTCTTCACCCACTTTCTC AGCATAACTAGTCCTTCGCCTGTTTCTTCACCCACTTTCTC < 41bp 0.853570564831175 0.463063865772977 0.4112656 0.2899968 prediction 0.70714112966235 Functional Loss - BORA ENSG00000136122 CDS Human protein_coding chr13:73320156 chr13:73320157 nonsynonymous SNV 0.234 0 22 hPsi_associated_SNPs_3751 0 0 1 0 2 Cytosol 0.43860241706054 0.438676480492386 0 0 hPsi_site_9168 iPseU_CNN:0;iRNA_PseU:0 9169 chr17 15643455 15643455 1 + A G UCEC 15643454 + 15643434 15643474 41 TCCTCGTGGCCTATTCTGCATATAACCCTGTGAGTATTCCC TCCTCGTGGCCTATTCTGCATGTAACCCTGTGAGTATTCCC < 41bp 0.88134741241333 0.527795877457702 0.6115679 0.36278844 prediction 0.707103069911255 Functional Loss - TBC1D26 ENSG00000214946 CDS Human protein_coding chr17:15643454 chr17:15643455 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_3752 0 0 0 1 2 exosome 0.438683102991557 0.438560079063573 0.2231358 0 hPsi_site_9169 iPseU_CNN:0.2231358;iRNA_PseU:0 9170 chr3 9759770 9759770 1 + A G LIHC 9759769 + 9759749 9759789 41 GTCCCTACCAGCTCAGCGCCTATGCCATGGCCCTCAAGGCA GTCCCTACCAGCTCAGCGCCTGTGCCATGGCCCTCAAGGCA < 41bp 0.895384466368203 0.541879564388814 0.64092314 0.35721177 prediction 0.707009803958776 Functional Loss - CPNE9 ENSG00000144550 CDS Human protein_coding chr3:9759769 chr3:9759770 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3753 0 0 0 0 1 exosome 0.438718144199767 0.43871804262455 0.28184628 0 hPsi_site_9170 iPseU_CNN:0.28184628;iRNA_PseU:0 9171 chr1 150957144 150957144 1 + A G UCEC 150957143 + 150957123 150957163 41 TGCAGGAGTGCCTGGCAGTCTACAAACACAGTAAGAATATA TGCAGGAGTGCCTGGCAGTCTGCAAACACAGTAAGAATATA < 41bp 0.853476248222314 0.46647687057036 0.36551604 0.25442836 prediction 0.706952496444628 Functional Loss - ANXA9 ENSG00000143412 CDS Human protein_coding chr1:150957143 chr1:150957144 nonsynonymous SNV 0.214 2 22 hPsi_associated_SNPs_3754 0 0 0 0 2 cytosol 0.438718593276497 0.438718594315254 0 0 hPsi_site_9171 iPseU_CNN:0;iRNA_PseU:0 9172 chr6 34952940 34952940 1 + A G COAD 34952939 + 34952919 34952959 41 AGGGTCCCTACGAAGCTCTGTATAATGCCATCTCCTGCCAT AGGGTCCCTACGAAGCTCTGTGTAATGCCATCTCCTGCCAT < 41bp 0.85345817419565 0.474489899001622 0.62727016 0.32517317 prediction 0.7069163483913 Functional Loss - ANKS1A ENSG00000064999 CDS Human protein_coding chr6:34952939 chr6:34952940 nonsynonymous SNV 0.788 3 22 hPsi_associated_SNPs_3755 0 0 1 0 1 Cytosol 0.438718567833317 0.438716347987554 0.25454032 0 hPsi_site_9172 iPseU_CNN:0.25454032;iRNA_PseU:0 9173 chrX 54950979 54950979 1 + A G SARC 54950978 + 54950958 54950998 41 ACCGCGAGATGTGGCCATTTTACAAGAAAGGGTAAGAATCC ACCGCGAGATGTGGCCATTTTGCAAGAAAGGGTAAGAATCC < 41bp 0.853452807013844 0.472118429788 0.74505085 0.3850902 prediction 0.706905614027689 Functional Loss - TRO ENSG00000067445 CDS Human protein_coding chrX:54950978 chrX:54950979 synonymous SNV . 0 22 hPsi_associated_SNPs_3756 0 0 1 0 0 exosome 0.438711596071093 0.438718590458986 0.4901017 0 hPsi_site_9173 iPseU_CNN:0.4901017;iRNA_PseU:0 9174 chr19 4236994 4236994 1 + A G SARC 4236993 + 4236973 4237013 41 TGCGGCCCCGAGCCAGGTACTACGTCCAAGTGGCGGCTCAG TGCGGCCCCGAGCCAGGTACTGCGTCCAAGTGGCGGCTCAG < 41bp 0.853446358954897 0.466005848408928 0.67068595 0.3148471 prediction 0.706892717909794 Functional Loss - EBI3 ENSG00000105246 CDS Human protein_coding chr19:4236993 chr19:4236994 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_3757 0 0 0 0 1 Cytosol 0.438716337757664 0.438716813620822 0.3413719 0 hPsi_site_9174 iPseU_CNN:0.3413719;iRNA_PseU:0 9175 chr5 172110894 172110894 1 + A G rs529582054 172110893 + 172110873 172110913 41 GTCGTGCGACCCGGGCGTGCTACGGCCCAACGAGCTGCCCG GTCGTGCGACCCGGGCGTGCTGCGGCCCAACGAGCTGCCCG < 41bp 0.853440822895584 0.479484064898729 0.79240215 0.3527736 prediction 0.706881645791167 Functional Loss - NEURL1B ENSG00000214357 CDS Human protein_coding chr5:172110893 chr5:172110894 synonymous SNV . 0 22 hPsi_associated_SNPs_3758 0 0 0 0 0 nucleus 0.43874512520243 0.438871098619475 0.5848043 0 hPsi_site_9175 iPseU_CNN:0.5848043;iRNA_PseU:0 9176 chr14 23235736 23235736 1 + A G rs114840523 23235735 + 23235715 23235755 41 GGCTCTCTGCGTGCTAATGGTAACGTGGCTTTACAGATTTT GGCTCTCTGCGTGCTAATGGTGACGTGGCTTTACAGATTTT < 41bp 0.8563944635789 0.502986270162281 0.84898615 0.6259607 prediction 0.706816386833237 Functional Loss - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23235735 chr14:23235736 synonymous SNV . 0 22 hPsi_associated_SNPs_3759 0 0 0 0 0 Cytosol 0.438718329713592 0.438705363674617 0.4460509 0 hPsi_site_9176 iPseU_CNN:0.4460509;iRNA_PseU:0 9177 chr7 128370025 128370025 1 + A G CESC 128370024 + 128370004 128370044 41 GTTGGAGGGCTTCATTCACGTACGGAGAGTGGGAAAGAGAG GTTGGAGGGCTTCATTCACGTGCGGAGAGTGGGAAAGAGAG < 41bp 0.853352535194314 0.460947525248477 0.40513524 0.2068747 prediction 0.706705070388627 Functional Loss - FAM71F1 ENSG00000135248 CDS Human protein_coding chr7:128370024 chr7:128370025 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_3760 0 0 0 0 2 exosome 0.438403183314646 0.438820945193793 0 0 hPsi_site_9177 iPseU_CNN:0;iRNA_PseU:0 9178 chr6 86197137 86197137 1 + A G GBM 86197136 + 86197116 86197156 41 AATTAGGGAAAACAATTGTCTATCTGGATGGCTCCTCTCAA AATTAGGGAAAACAATTGTCTGTCTGGATGGCTCCTCTCAA < 41bp 0.853333946496177 0.45681003367557 0.5771347 0.30096614 prediction 0.706667892992353 Functional Loss - NT5E ENSG00000135318 CDS Human protein_coding chr6:86197136 chr6:86197137 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_3761 0 0 1 0 2 nucleus 0.438718592995565 0.438718592995119 0.1542694 0 hPsi_site_9178 iPseU_CNN:0.1542694;iRNA_PseU:0 9179 chr6 39869726 39869726 1 + A G COAD 39869725 + 39869705 39869745 41 GGAGGTCTTCGACAAGGACTTATGCAAGCTCAAGCGCAGCC GGAGGTCTTCGACAAGGACTTGTGCAAGCTCAAGCGCAGCC < 41bp 0.880018679865631 0.52669200318783 0.818238 0.5377952 prediction 0.706653353355601 Functional Loss - DAAM2 ENSG00000146122 CDS Human protein_coding chr6:39869725 chr6:39869726 synonymous SNV . 0 22 hPsi_associated_SNPs_3762 0 0 0 0 0 exosome 0.43868926345444 0.438573862219062 0.5608856 0 hPsi_site_9179 iPseU_CNN:0.5608856;iRNA_PseU:0 9180 chr12 55945546 55945546 1 + A G rs118025438 55945545 + 55945525 55945565 41 TGAATCACTATTACTGTGACTATGGGCCTCTCGTGGAGCTT TGAATCACTATTACTGTGACTGTGGGCCTCTCGTGGAGCTT < 41bp 0.862795961079637 0.509472230614688 0.3407846 0.29952103 prediction 0.706647460929898 Functional Loss - OR6C4 ENSG00000179626 CDS Human protein_coding chr12:55945545 chr12:55945546 nonsynonymous SNV 0.435 2 22 hPsi_associated_SNPs_3763 0 0 0 0 0 unknown 0.438755702126938 0.438551510068483 0 0 hPsi_site_9180 iPseU_CNN:0;iRNA_PseU:0 9181 chr17 41150820 41150820 1 + A G rs116316268 41150819 + 41150799 41150839 41 TGCTTGTCCTGGCTGGACGCTACTCCGGACGCAAAGCTGTC TGCTTGTCCTGGCTGGACGCTGCTCCGGACGCAAAGCTGTC < 41bp 0.8772606217878 0.523938526083626 0.6759446 0.22294286 prediction 0.706644191408347 Functional Loss - RPL27 ENSG00000131469 CDS Human protein_coding chr17:41150819 chr17:41150820 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3764 0 0 1 0 2 Cytosol 0.439837350097047 0.438765000651213 0.3518892 0 hPsi_site_9181 iPseU_CNN:0.3518892;iRNA_PseU:0 9182 chr7 99699386 99699386 1 + T C UCEC 99699387 - 99699367 99699407 41 GGTCTAGGATACAGTCTTTGTAGATGAGCGGGTCCCCCTTG GGTCTAGGATACAGTCTTTGTGGATGAGCGGGTCCCCCTTG < 41bp 0.853318199192835 0.48083640151768 0.6236994 0.39283913 prediction 0.706636398385671 Functional Loss - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99699387 chr7:99699386 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3765 0 0 1 0 0 Cytosol 0.43876200149878 0.438718592995111 0.2473988 0 hPsi_site_9182 iPseU_CNN:0.2473988;iRNA_PseU:0 9183 chrX 30269413 30269413 1 + A G BLCA 30269412 + 30269392 30269432 41 CCAACAGTGATCCCCCACGCTATCAATTCCTATGGGGTCCG CCAACAGTGATCCCCCACGCTGTCAATTCCTATGGGGTCCG < 41bp 0.853313452512153 0.473885334908225 0.32152498 0.27968243 prediction 0.706626905024307 Functional Loss - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30269412 chrX:30269413 nonsynonymous SNV 0.282 2 22 hPsi_associated_SNPs_3766 0 0 0 0 0 nucleolus 0.43857021278037 0.43846876412491 0 0 hPsi_site_9183 iPseU_CNN:0;iRNA_PseU:0 9184 chr1 120056951 120056951 1 + A G READ 120056950 + 120056930 120056970 41 CACCAAAGCTATGATAACCTTAATTACACCCTGAGCAAAGA CACCAAAGCTATGATAACCTTGATTACACCCTGAGCAAAGA < 41bp 0.853281474873637 0.471088769415748 0.30934912 0.2076681 prediction 0.706562949747275 Functional Loss - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120056950 chr1:120056951 nonsynonymous SNV 0.154 3 22 hPsi_associated_SNPs_3767 0 0 0 0 0 exosome 0.43872276148452 0.438718589984659 0 0 hPsi_site_9184 iPseU_CNN:0;iRNA_PseU:0 9185 chr2 27823596 27823596 1 + A G UCEC 27823595 + 27823575 27823615 41 TGGTACTTAGAAATCGTTGATAAAGGCAGTGTCTCCTGCCC TGGTACTTAGAAATCGTTGATGAAGGCAGTGTCTCCTGCCC < 41bp 0.883115056584892 0.529842478705323 0.4975704 0.33842385 prediction 0.706545155759138 Functional Loss - ZNF512 ENSG00000243943 CDS Human protein_coding chr2:27823595 chr2:27823596 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3768 0 0 1 0 2 Cytosol 0.43842326420125 0.438712146394477 0 0 hPsi_site_9185 iPseU_CNN:0;iRNA_PseU:0 9186 chr20 19970881 19970881 1 + A G OV 19970880 + 19970860 19970900 41 TCATGACCATGCAGAAGATGTATTCGCCGGAAAAGAAGGTC TCATGACCATGCAGAAGATGTGTTCGCCGGAAAAGAAGGTC < 41bp 0.853270730759916 0.458667841657903 0.57719916 0.28095758 prediction 0.706541461519832 Functional Loss - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19970880 chr20:19970881 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_3769 0 0 0 0 1 Nucleus 0.438718588151088 0.438718592006434 0.15439832 0 hPsi_site_9186 iPseU_CNN:0.15439832;iRNA_PseU:0 9187 chr20 31375097 31375097 1 + A G UCEC 31375096 + 31375076 31375116 41 GGCCGTCCCCTCCCAGCTCTTACCTTACCATCGACCTCACA GGCCGTCCCCTCCCAGCTCTTGCCTTACCATCGACCTCACA < 41bp 0.881679778034607 0.528419504102018 0.8948251 0.43822563 prediction 0.706520547865179 Functional Loss - DNMT3B ENSG00000088305 CDS Human protein_coding chr20:31375096 chr20:31375097 nonsynonymous SNV 0.957 2 22 hPsi_associated_SNPs_3770 0 0 1 0 1 chromatin 0.438718592994907 0.438718592992949 0.7896502 0 hPsi_site_9187 iPseU_CNN:0.7896502;iRNA_PseU:0 9188 chr11 5968893 5968893 1 + A G PRAD 5968892 + 5968872 5968912 41 CTGCCTGCTTCCTCCAGATGTACATCATGAATTGTTTCCTA CTGCCTGCTTCCTCCAGATGTGCATCATGAATTGTTTCCTA < 41bp 0.853247380000895 0.478593726332609 0.34249356 0.28326267 prediction 0.70649476000179 Functional Loss - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5968892 chr11:5968893 nonsynonymous SNV 0.809 1 22 hPsi_associated_SNPs_3771 0 0 0 0 0 unknown 0.438718617805583 0.438721773303327 0 0 hPsi_site_9188 iPseU_CNN:0;iRNA_PseU:0 9189 chr1 162724593 162724593 1 + A G STAD 162724592 + 162724572 162724612 41 CCCCCATGTACAAGATCAATTACAGTCGGGATGGCACTCGC CCCCCATGTACAAGATCAATTGCAGTCGGGATGGCACTCGC < 41bp 0.882545879636137 0.52930311886932 0.68300647 0.19376388 prediction 0.706485521533633 Functional Loss - DDR2 ENSG00000162733 CDS Human protein_coding chr1:162724592 chr1:162724593 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3772 0 0 0 0 1 nucleolus 0.438751709460593 0.438682204022811 0.36601294 0 hPsi_site_9189 iPseU_CNN:0.36601294;iRNA_PseU:0 9190 chrX 70518613 70518613 1 + A C STAD 70518612 + 70518592 70518632 41 CCTGCTCCTGTGCCAGCTGGTACCCCAGCTCCTCCAGGACC CCTGCTCCTGTGCCAGCTGGTCCCCCAGCTCCTCCAGGACC < 41bp 0.853234504107956 0.495061240908521 0.7544321 0.24162188 prediction 0.706469008215912 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70518612 chrX:70518613 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3773 0 0 1 0 2 Nucleus 0.438718600610644 0.438718593001206 0.5088642 0 hPsi_site_9190 iPseU_CNN:0.5088642;iRNA_PseU:0 9191 chr9 22451706 22451706 1 + A G rs78439994 22451705 + 22451685 22451725 41 TAGAGTAGGTATCAGTCCATTAAGGCTGGCATATTCTTCTG TAGAGTAGGTATCAGTCCATTGAGGCTGGCATATTCTTCTG < 41bp 0.879666145716984 0.526441445637203 0.35439458 0.19280827 prediction 0.706449400159562 Functional Loss - DMRTA1 ENSG00000176399 CDS Human protein_coding chr9:22451705 chr9:22451706 synonymous SNV . 0 22 hPsi_associated_SNPs_3774 0 0 0 0 0 exosome 0.438719676038928 0.438708351233267 0 0 hPsi_site_9191 iPseU_CNN:0;iRNA_PseU:0 9192 chr13 53217493 53217493 1 + A G rs78872760 53217492 + 53217472 53217512 41 GAGGCAGAAGCTCTGGCCCCTATGGCGGTGGAGGCCAATAC GAGGCAGAAGCTCTGGCCCCTGTGGCGGTGGAGGCCAATAC < 41bp 0.882995425131373 0.529783183964176 0.23465133 0.24315643 prediction 0.706424482334393 Functional Loss - HNRNPA1L2 ENSG00000139675 CDS Human protein_coding chr13:53217492 chr13:53217493 nonsynonymous SNV 0.047 3 22 hPsi_associated_SNPs_3775 0 0 0 0 0 Ribosome 0.438718958391313 0.438719852371081 0 0 hPsi_site_9192 iPseU_CNN:0;iRNA_PseU:0 9193 chr1 172558159 172558159 1 + A G STAD 172558158 + 172558138 172558178 41 ATATATAAATGGTGTTCAGTTAGAGTTGCTCTTTATCGGCA ATATATAAATGGTGTTCAGTTGGAGTTGCTCTTTATCGGCA < 41bp 0.853195307713092 0.473773264622215 0.4095468 0.2658691 prediction 0.706390615426185 Functional Loss - SUCO ENSG00000094975 CDS Human protein_coding chr1:172558158 chr1:172558159 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3776 0 0 1 0 0 Ribosome 0.438718592826598 0.438699503323436 0 0 hPsi_site_9193 iPseU_CNN:0;iRNA_PseU:0 9194 chr10 122650306 122650306 1 + A G COAD 122650305 + 122650285 122650325 41 GTGGACTGGTGTACGTCAGATAAAGTGATCTTGGCCTCAGA GTGGACTGGTGTACGTCAGATGAAGTGATCTTGGCCTCAGA < 41bp 0.884686951560545 0.531498365846656 0.66112816 0.4152986 prediction 0.706377171427779 Functional Loss - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122650305 chr10:122650306 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3777 0 0 1 0 2 Nucleus 0.438804202632111 0.438897544385395 0.32225632 0 hPsi_site_9194 iPseU_CNN:0.32225632;iRNA_PseU:0 9195 chr11 55322712 55322712 1 + A G LUSC 55322711 + 55322691 55322731 41 CTTTGTCCCATGCATATTTGTATATACACGACCTCCATCTG CTTTGTCCCATGCATATTTGTGTATACACGACCTCCATCTG < 41bp 0.853180737654115 0.496013496092396 0.3793976 0.27676505 prediction 0.706361475308229 Functional Loss - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322711 chr11:55322712 synonymous SNV . 0 22 hPsi_associated_SNPs_3778 0 0 0 0 0 unknown 0.426541896109864 0.41646984854174 0 0 hPsi_site_9195 iPseU_CNN:0;iRNA_PseU:0 9196 chr12 130827551 130827551 1 + A G rs200930825 130827550 + 130827530 130827570 41 TACAGAGTCAGCAACCTGGTTATATTCAGCCTAGGCCTCAG TACAGAGTCAGCAACCTGGTTGTATTCAGCCTAGGCCTCAG < 41bp 0.878108782427195 0.524941422435836 0.93297637 0.69366556 prediction 0.706334719982719 Functional Loss - PIWIL1 ENSG00000125207 CDS Human protein_coding chr12:130827550 chr12:130827551 nonsynonymous SNV 0.112 1 22 hPsi_associated_SNPs_3779 0 0 0 0 1 Nucleus 0.438686252124468 0.438485895378947 0.47862162 0 hPsi_site_9196 iPseU_CNN:0.47862162;iRNA_PseU:0 9197 chr17 7762865 7762865 1 + A G COAD 7762864 + 7762844 7762884 41 GAAGAATTTGACTATCTCAGTATGGACGGTACACTTCACAC GAAGAATTTGACTATCTCAGTGTGGACGGTACACTTCACAC < 41bp 0.873908760932458 0.520768128980634 0.21831381 0.21687114 prediction 0.706281263903648 Functional Loss - CYB5D1 ENSG00000182224 CDS Human protein_coding chr17:7762864 chr17:7762865 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_3780 0 0 1 0 0 Ribosome 0.438646450508899 0.439704619706721 0 0 hPsi_site_9197 iPseU_CNN:0;iRNA_PseU:0 9198 chr20 9496668 9496668 1 + A G LUAD 9496667 + 9496647 9496687 41 CTGATCACAGAACAGGCCGATATCGCATTGACCCGGGGAGC CTGATCACAGAACAGGCCGATGTCGCATTGACCCGGGGAGC < 41bp 0.853139735509785 0.456643246105972 0.58352244 0.31127214 prediction 0.70627947101957 Functional Loss - LAMP5 ENSG00000125869 CDS Human protein_coding chr20:9496667 chr20:9496668 nonsynonymous SNV 0.060 0 22 hPsi_associated_SNPs_3781 0 0 0 0 1 exosome 0.438718969470351 0.438718801386447 0.16704488 0 hPsi_site_9198 iPseU_CNN:0.16704488;iRNA_PseU:0 9199 chr1 179886654 179886654 1 + A G STAD 179886653 + 179886633 179886673 41 GTGGTGGCTACTTCCTCTGATAGCTGCTCTTGCCTCTGGGA GTGGTGGCTACTTCCTCTGATGGCTGCTCTTGCCTCTGGGA < 41bp 0.853101904657625 0.477530718967618 0.22846326 0.15453166 prediction 0.706203809315251 Functional Loss - TOR1AIP1 ENSG00000143337 CDS Human protein_coding chr1:179886653 chr1:179886654 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_3782 0 0 1 0 1 Endoplasmic reticulum 0.438719003951739 0.438718592987381 0 0 hPsi_site_9199 iPseU_CNN:0;iRNA_PseU:0 9200 chr4 1019571 1019571 1 + A G rs533874850 1019570 + 1019550 1019590 41 GCACACACGTGCAGATATGGTATCCGGACACACACGTGCAC GCACACACGTGCAGATATGGTGTCCGGACACACACGTGCAC < 41bp 0.853085108230768 0.481654240193727 0.6818899 0.27041695 prediction 0.706170216461536 Functional Loss - FGFRL1 ENSG00000127418 UTR3 Human protein_coding chr4:1019570 chr4:1019571 . . 0 22 hPsi_associated_SNPs_3783 0 0 1 0 0 Ribosome 0.438142847596357 0.435212565317161 0.3637798 0 hPsi_site_9200 iPseU_CNN:0.3637798;iRNA_PseU:0 Blood protein levels 9201 chr11 93529669 93529669 1 + A G LUSC 93529668 + 93529648 93529688 41 AATGTCCGGAGGACCACCTTTATGTCCTAGAGCATAATTTG AATGTCCGGAGGACCACCTTTGTGTCCTAGAGCATAATTTG < 41bp 0.853037016839001 0.463209998925207 0.29096663 0.26073492 prediction 0.706074033678002 Functional Loss - MED17 ENSG00000042429 CDS Human protein_coding chr11:93529668 chr11:93529669 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3784 0 0 1 0 2 Cytosol 0.438718811328318 0.438718924816803 0 0 hPsi_site_9201 iPseU_CNN:0;iRNA_PseU:0 9202 chr19 54466524 54466524 1 + A G UCEC 54466523 + 54466503 54466543 41 CCATCGCCATCAGCACTGACTACTGGCTCTACACGCGCGCC CCATCGCCATCAGCACTGACTGCTGGCTCTACACGCGCGCC < 41bp 0.853034676313847 0.473001896983338 0.42289943 0.2361142 prediction 0.706069352627694 Functional Loss - CACNG8 ENSG00000142408 CDS Human protein_coding chr19:54466523 chr19:54466524 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3785 0 0 1 0 0 exosome 0.438812833336368 0.438709859883076 0 0 hPsi_site_9202 iPseU_CNN:0;iRNA_PseU:0 9203 chr2 202342452 202342452 1 + A G COAD 202342451 + 202342431 202342471 41 GACAGAGGCATAGGGCTGTGTATGATTTCCCACAGTTCAGC GACAGAGGCATAGGGCTGTGTGTGATTTCCCACAGTTCAGC < 41bp 0.889016336717668 0.535983769426062 0.5209319 0.4306395 prediction 0.706065134583211 Functional Loss - STRADB ENSG00000082146 CDS Human protein_coding chr2:202342451 chr2:202342452 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_3786 0 0 0 0 1 Cytosol 0.438716193505568 0.438761317192216 0.0418638 0 hPsi_site_9203 iPseU_CNN:0.0418638;iRNA_PseU:0 9204 chr19 57931882 57931882 1 + A G COAD 57931881 + 57931861 57931901 41 AATGTGGGAAATACTTTATGTACAGTTCAGCACTCATTAGA AATGTGGGAAATACTTTATGTGCAGTTCAGCACTCATTAGA < 41bp 0.879908157396635 0.526875801525648 0.6907356 0.24497715 prediction 0.706064711741975 Functional Loss - ZNF17 ENSG00000186272 CDS Human protein_coding chr19:57931881 chr19:57931882 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_3787 0 0 1 0 0 nucleus 0.43818402398451 0.438718767537871 0.3814712 0 hPsi_site_9204 iPseU_CNN:0.3814712;iRNA_PseU:0 9205 chr14 24572384 24572384 1 + A G UCEC 24572383 + 24572363 24572403 41 ATCTAGGGGTACCCCTGGTATACGAGGCCTTCAACTGGCGT ATCTAGGGGTACCCCTGGTATGCGAGGCCTTCAACTGGCGT < 41bp 0.853018285943351 0.459587324563267 0.67336845 0.65303445 prediction 0.706036571886702 Functional Loss - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24572383 chr14:24572384 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_3788 0 0 1 0 2 Endoplasmic reticulum 0.438720732054102 0.438720730918858 0.0406679999999999 0 hPsi_site_9205 iPseU_CNN:0.0406679999999999;iRNA_PseU:0 9206 chr11 57982889 57982889 1 + A G rs559413431 57982888 + 57982868 57982908 41 TCAGTTATCATCTTCCCCTTTACACTCAGCTTCTTTTCCTA TCAGTTATCATCTTCCCCTTTGCACTCAGCTTCTTTTCCTA < 41bp 0.858363041672225 0.505409095483094 0.49165595 0.2754544 prediction 0.705907892378262 Functional Loss - OR1S1 ENSG00000172774 CDS Human other chr11:57982888 chr11:57982889 nonsynonymous SNV 0.114 0 22 hPsi_associated_SNPs_3789 0 0 0 0 0 unknown 0.438718592994982 0.438718592996229 0 0 hPsi_site_9206 iPseU_CNN:0;iRNA_PseU:0 9207 chr1 40980826 40980826 1 + A G rs41268067 40980825 + 40980805 40980845 41 CTCAAGACACGCAGGCGCCCTATGCTCCCTCTGGAAGCTCA CTCAAGACACGCAGGCGCCCTGTGCTCCCTCTGGAAGCTCA < 41bp 0.879764583699221 0.52681360476898 0.7004801 0.29873556 prediction 0.705901957860482 Functional Loss - EXO5 ENSG00000164002 CDS Human protein_coding chr1:40980825 chr1:40980826 nonsynonymous SNV 0.571 0 22 hPsi_associated_SNPs_3790 0 0 1 0 0 nucleus 0.437296527045421 0.432015407480797 0.4009602 0 hPsi_site_9207 iPseU_CNN:0.4009602;iRNA_PseU:0 9208 chrX 1534293 1534293 1 + A G rs7472923 1534292 + 1534272 1534312 41 CACTCCCCTCACGTCTCGGCTACTTGCACTGATGATAACTT CACTCCCCTCACGTCTCGGCTGCTTGCACTGATGATAACTT < 41bp 0.852948294252901 0.491706804961432 0.34961683 0.18240404 prediction 0.705896588505802 Functional Loss - ASMTL-AS1 ENSG00000169093 intronic Human protein_coding chrX:1534292 chrX:1534293 . . 0 22 hPsi_associated_SNPs_3791 0 0 1 3 0 unknown 0.438719178773809 0.438734364756165 0 0 hPsi_site_9208 iPseU_CNN:0;iRNA_PseU:0 9209 chr6 137147527 137147527 1 + A G COAD 137147526 + 137147506 137147546 41 GAACATGTCCTCATCACCTGTAGTGGCGATGGCTCGCTGCA GAACATGTCCTCATCACCTGTGGTGGCGATGGCTCGCTGCA < 41bp 0.852943064569596 0.456492757331257 0.4378259 0.25761214 prediction 0.705886129139192 Functional Loss - PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147526 chr6:137147527 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_3792 0 0 0 0 2 Ribosome 0.438366510807306 0.438376944262653 0 0 hPsi_site_9209 iPseU_CNN:0;iRNA_PseU:0 9210 chr7 65419356 65419356 1 + A G rs577125188 65419355 + 65419335 65419375 41 TTTATTTTGCAGCAGGTTTTTATTATTATTATTATTATTAT TTTATTTTGCAGCAGGTTTTTGTTATTATTATTATTATTAT < 41bp 0.852920642433973 0.496705520239316 0.08367112 0.08581999 prediction 0.705841284867946 Functional Loss - VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419355 chr7:65419356 nonsynonymous SNV 0.738 2 22 hPsi_associated_SNPs_3793 0 0 1 2 0 Endoplasmic reticulum 0.438719544972587 0.438836811014302 0 0 hPsi_site_9210 iPseU_CNN:0;iRNA_PseU:0 9211 chr19 41774169 41774169 1 + A G UCEC 41774168 + 41774148 41774188 41 AGGCAGAACCAATTCTACGATACCCAAGTCATCAAACAAGA AGGCAGAACCAATTCTACGATGCCCAAGTCATCAAACAAGA < 41bp 0.872644978212831 0.519761660879867 0.45421934 0.23910856 prediction 0.705766634665928 Functional Loss - HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41774168 chr19:41774169 nonsynonymous SNV 0.970 0 22 hPsi_associated_SNPs_3794 0 0 1 0 2 Cytosol 0.439219663237491 0.439536673867048 0 0 hPsi_site_9211 iPseU_CNN:0;iRNA_PseU:0 9212 chr2 96935044 96935044 1 + A G rs72937663 96935043 + 96935023 96935063 41 TCTGACCCCAGTTGGAAATGTATCTGTACTTTGTCCGGCTT TCTGACCCCAGTTGGAAATGTGTCTGTACTTTGTCCGGCTT < 41bp 0.884408019782529 0.531531355392223 0.6984582 0.36119318 prediction 0.705753328780612 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96935043 chr2:96935044 nonsynonymous SNV 0.922 0 22 hPsi_associated_SNPs_3795 0 0 1 0 2 Ribosome 0.437439769138601 0.433137248223369 0.3969164 0 hPsi_site_9212 iPseU_CNN:0.3969164;iRNA_PseU:0 9213 chr13 24465961 24465961 1 + T C UCEC 24465962 - 24465942 24465982 41 TTACCGGGCCCCATGGGCCCTATTGGAAAGCCTGGTCCCAA TTACCGGGCCCCATGGGCCCTGTTGGAAAGCCTGGTCCCAA < 41bp 0.852859059206347 0.457044812741019 0.36059204 0.27328208 prediction 0.705718118412695 Functional Loss - C1QTNF9B;PCOTH ENSG00000205863 CDS Human protein_coding chr13:24465962 chr13:24465961 nonsynonymous SNV 0.722 1 22 hPsi_associated_SNPs_3796 0 0 0 0 0 unknown 0.438718592560068 0.438718592187074 0 0 hPsi_site_9213 iPseU_CNN:0;iRNA_PseU:0 9214 chr1 150256238 150256238 1 + A G UCEC 150256237 + 150256217 150256257 41 TAAAGAACTCCAAGGATTTATACCTCCTCTCACAGACCTAC TAAAGAACTCCAAGGATTTATGCCTCCTCTCACAGACCTAC < 41bp 0.852843742825511 0.460362618954768 0.5435268 0.28725117 prediction 0.705687485651022 Functional Loss - CIART ENSG00000159208 CDS Human protein_coding chr1:150256237 chr1:150256238 nonsynonymous SNV 0.940 4 22 hPsi_associated_SNPs_3797 0 0 0 0 1 exosome 0.438718173077048 0.438718551201683 0.0870536 0 hPsi_site_9214 iPseU_CNN:0.0870536;iRNA_PseU:0 9215 chr7 111846857 111846857 1 + A G CESC 111846856 + 111846836 111846876 41 GCACAGTCGGGGGTGTAGGTTATGGGGGTGAGTACGGTGCC GCACAGTCGGGGGTGTAGGTTGTGGGGGTGAGTACGGTGCC < 41bp 0.865995095000919 0.513160096003134 0.62783855 0.42484927 prediction 0.705669997995571 Functional Loss - ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111846856 chr7:111846857 nonsynonymous SNV 0.636 0 22 hPsi_associated_SNPs_3798 0 0 0 0 1 chromatin 0.438734780391685 0.43872499887856 0.2556771 0 hPsi_site_9215 iPseU_CNN:0.2556771;iRNA_PseU:0 9216 chr15 67457335 67457335 1 + A G rs1065080 67457334 + 67457314 67457354 41 CCTGCACAGCCACCACGAGCTACGGGCCATGGAGCTGTGTG CCTGCACAGCCACCACGAGCTGCGGGCCATGGAGCTGTGTG < 41bp 0.891745376717947 0.538937330469369 0.7247865 0.26954067 prediction 0.705616092497156 Functional Loss - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67457334 chr15:67457335 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_3799 3 0 1 0 1 Cytosol 0.426433051451447 0.395194203405281 0.449573 0 hPsi_site_9216 iPseU_CNN:0.449573;iRNA_PseU:0 9217 chr6 44218826 44218826 1 + A G rs2070694 44218825 + 44218805 44218845 41 GTTGGAATTCAGGGCATTGCTATTTATTCCTCGTCGGGCTC GTTGGAATTCAGGGCATTGCTGTTTATTCCTCGTCGGGCTC < 41bp 0.852806350777885 0.465147972095996 0.3536685 0.27620035 prediction 0.70561270155577 Functional Loss - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218825 chr6:44218826 synonymous SNV . 0 22 hPsi_associated_SNPs_3800 0 0 1 0 1 Nucleus 0.438739720353774 0.438778971002847 0 0 hPsi_site_9217 iPseU_CNN:0;iRNA_PseU:0 9218 chrX 57146545 57146545 1 + T C ESCA 57146546 - 57146526 57146566 41 ATGAGAAAGATCCTGTCTTGTACATGTACCAGCTTCTAGAT ATGAGAAAGATCCTGTCTTGTGCATGTACCAGCTTCTAGAT < 41bp 0.872890228065957 0.52009007851307 0.4982755 0.23811963 prediction 0.705600299105774 Functional Loss - SPIN2B ENSG00000186787 CDS Human protein_coding chrX:57146546 chrX:57146545 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3801 0 0 0 0 0 exosome 0.405456464485322 0.435445826959563 0 0 hPsi_site_9218 iPseU_CNN:0;iRNA_PseU:0 9219 chr4 40245254 40245254 1 + A G LUSC 40245253 + 40245233 40245273 41 CAGACGTGGTGCTGATGTGCTACTCTGTGGCCAACCATAAC CAGACGTGGTGCTGATGTGCTGCTCTGTGGCCAACCATAAC < 41bp 0.89244200022295 0.539642477094056 0.68398976 0.21598372 prediction 0.705599046257788 Functional Loss - RHOH ENSG00000168421 CDS Human protein_coding chr4:40245253 chr4:40245254 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3802 0 0 0 0 0 Cytosol 0.431778939419536 0.416978155387603 0.36797952 0 hPsi_site_9219 iPseU_CNN:0.36797952;iRNA_PseU:0 9220 chrX 15560130 15560130 1 + A G UCEC 15560129 + 15560109 15560149 41 CTCAGCCATCCCAAGCTGGTTAAATTCTATGGAGTGTGTTC CTCAGCCATCCCAAGCTGGTTGAATTCTATGGAGTGTGTTC < 41bp 0.852756717753859 0.469924589259144 0.69010556 0.37063345 prediction 0.705513435507718 Functional Loss - BMX ENSG00000102010 CDS Human protein_coding chrX:15560129 chrX:15560130 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_3803 0 0 0 0 1 cytosol 0.43979001019045 0.438623030613351 0.38021112 0 hPsi_site_9220 iPseU_CNN:0.38021112;iRNA_PseU:0 9221 chr19 41743953 41743953 1 + A C LUSC 41743952 + 41743932 41743972 41 GCCCCCCCATCAGCTTCGGCTAGGCAGCCTCCATCCTCACA GCCCCCCCATCAGCTTCGGCTCGGCAGCCTCCATCCTCACA < 41bp 0.856153038464311 0.503407600404749 0.41206142 0.19325358 prediction 0.705490876119123 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41743952 chr19:41743953 synonymous SNV . 0 22 hPsi_associated_SNPs_3804 0 0 0 0 0 Nucleus 0.438718592999395 0.438719173387612 0 0 hPsi_site_9221 iPseU_CNN:0;iRNA_PseU:0 9222 chr3 51697166 51697166 1 + A G UCEC 51697165 + 51697145 51697185 41 CAACCCTTCTGTGCCAGGGATACTACCCAGCTATTCACTCC CAACCCTTCTGTGCCAGGGATGCTACCCAGCTATTCACTCC < 41bp 0.85273099753399 0.471422868582036 0.779591 0.44566846 prediction 0.70546199506798 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51697165 chr3:51697166 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_3805 0 0 1 0 0 chromatin 0.438738971922877 0.438731890003505 0.559182 0 hPsi_site_9222 iPseU_CNN:0.559182;iRNA_PseU:0 9223 chr14 67787819 67787819 1 + A G UCEC 67787818 + 67787798 67787838 41 AAGAAGTAGCCGGTAGAGATTACCACTTTGTTTCGCGGCAA AAGAAGTAGCCGGTAGAGATTGCCACTTTGTTTCGCGGCAA < 41bp 0.852723201710252 0.46343419429853 0.60660267 0.40909854 prediction 0.705446403420503 Functional Loss - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67787818 chr14:67787819 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3806 0 0 1 0 1 Ribosome 0.439915150561718 0.439380166846126 0.21320534 0 hPsi_site_9223 iPseU_CNN:0.21320534;iRNA_PseU:0 9224 chr19 58132139 58132139 1 + A G rs546036164 58132138 + 58132118 58132158 41 AAAGCCTTCAGCCGCAAAGCTACACTTGTCCAGCATCAGAG AAAGCCTTCAGCCGCAAAGCTGCACTTGTCCAGCATCAGAG < 41bp 0.852717147245276 0.473839106627987 0.6817829 0.26763844 prediction 0.705434294490551 Functional Loss - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58132138 chr19:58132139 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3807 0 0 1 0 0 Cytosol 0.438718581385244 0.438753808731625 0.3635658 0 hPsi_site_9224 iPseU_CNN:0.3635658;iRNA_PseU:0 9225 chr7 100551465 100551465 1 + A G rs112478789 100551464 + 100551444 100551484 41 ACCCACTGATATCAGTACCTTACCAACTCGAACACACATCA ACCCACTGATATCAGTACCTTGCCAACTCGAACACACATCA < 41bp 0.852660982890428 0.493628186460225 0.2999973 0.19122675 prediction 0.705321965780857 Functional Loss - MUC3A ENSG00000169894 CDS Human protein_coding chr7:100551464 chr7:100551465 synonymous SNV . 0 22 hPsi_associated_SNPs_3808 0 0 0 0 0 exosome 0.407470612394999 0.401667239345873 0 0 hPsi_site_9225 iPseU_CNN:0;iRNA_PseU:0 9226 chr11 118885740 118885740 1 + A G UCEC 118885739 + 118885719 118885759 41 GGATGATCCAAGATGAAGAATACATTGCTGGGAACCAAGAA GGATGATCCAAGATGAAGAATGCATTGCTGGGAACCAAGAA < 41bp 0.878499582666717 0.525841001652557 0.5990986 0.3041302 prediction 0.705317162028319 Functional Loss - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118885739 chr11:118885740 nonsynonymous SNV 0.026 0 22 hPsi_associated_SNPs_3809 0 0 1 0 2 Cytosol 0.438717855477411 0.438806213837067 0.1981972 0 hPsi_site_9226 iPseU_CNN:0.1981972;iRNA_PseU:0 9227 chr2 182347362 182347362 1 + A G PRAD 182347361 + 182347341 182347381 41 AGGAAGGAAGAGTGTTTGTGTACATCAACTCTGGCTCGGTA AGGAAGGAAGAGTGTTTGTGTGCATCAACTCTGGCTCGGTA < 41bp 0.883121442678404 0.530479881404908 0.6641673 0.52669984 prediction 0.70528312254699 Functional Loss - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182347361 chr2:182347362 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3810 0 0 0 0 1 exosome 0.441752779091003 0.450508437150397 0.27493492 0 hPsi_site_9227 iPseU_CNN:0.27493492;iRNA_PseU:0 9228 chr19 4247164 4247164 1 + A G UCEC 4247163 + 4247143 4247183 41 GATGTCGGAGCGAAAAGTATTAAACGTAAGTGTTGGGCGAC GATGTCGGAGCGAAAAGTATTGAACGTAAGTGTTGGGCGAC < 41bp 0.852570864367555 0.488895092862219 0.74937516 0.5288533 prediction 0.70514172873511 Functional Loss - CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4247163 chr19:4247164 synonymous SNV . 0 22 hPsi_associated_SNPs_3811 0 0 1 0 1 Ribosome 0.438742475206555 0.438719199963937 0.44104372 0 hPsi_site_9228 iPseU_CNN:0.44104372;iRNA_PseU:0 9229 chr1 207653349 207653349 1 + A G COAD 207653348 + 207653328 207653368 41 GCTGCAGGTTTGATACTTCTTACCTTCTTGATTGTCATTAC GCTGCAGGTTTGATACTTCTTGCCTTCTTGATTGTCATTAC < 41bp 0.852565495557814 0.466693700029004 0.6648333 0.17497927 prediction 0.705130991115628 Functional Loss - CR2 ENSG00000117322 CDS Human protein_coding chr1:207653348 chr1:207653349 nonsynonymous SNV 0.055 0 22 hPsi_associated_SNPs_3812 0 0 0 0 2 Endoplasmic reticulum 0.438780278023715 0.438739367945068 0.3296666 0 hPsi_site_9229 iPseU_CNN:0.3296666;iRNA_PseU:0 9230 chr1 150443485 150443485 1 + A G SKCM 150443484 + 150443464 150443504 41 TGGTTTCAGTGGCTTAAACTTAAACATCCCAATCCTGAGCA TGGTTTCAGTGGCTTAAACTTGAACATCCCAATCCTGAGCA < 41bp 0.852554624100861 0.469076475660715 0.44049758 0.21190998 prediction 0.705109248201722 Functional Loss - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150443484 chr1:150443485 synonymous SNV . 0 22 hPsi_associated_SNPs_3813 0 0 1 0 0 Cytosol 0.438718599668805 0.439002555896697 0 0 hPsi_site_9230 iPseU_CNN:0;iRNA_PseU:0 9231 chrX 71358519 71358519 1 + A G UCEC 71358518 + 71358498 71358538 41 TGGAGAGCATGGGAATGGTGTACAGTGTCCCCAGTTCTTGC TGGAGAGCATGGGAATGGTGTGCAGTGTCCCCAGTTCTTGC < 41bp 0.852537316400723 0.460781272140367 0.71078193 0.5322246 prediction 0.705074632801446 Functional Loss - NHSL2 ENSG00000204131 CDS Human protein_coding chrX:71358518 chrX:71358519 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3814 0 0 0 0 0 exosome 0.438736107100274 0.438732085916188 0.35711466 0 hPsi_site_9231 iPseU_CNN:0.35711466;iRNA_PseU:0 9232 chr3 53221415 53221415 1 + A G BLCA 53221414 + 53221394 53221434 41 TACACAGCAAGGGCATCATTTACAGGTGCGGGGGTGAGGGC TACACAGCAAGGGCATCATTTGCAGGTGCGGGGGTGAGGGC < 41bp 0.852528565137326 0.449284014643775 0.3767623 0.26923084 prediction 0.705057130274651 Functional Loss - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53221414 chr3:53221415 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_3815 0 0 1 0 2 Cytosol 0.438713218304377 0.438711136698701 0 0 hPsi_site_9232 iPseU_CNN:0;iRNA_PseU:0 9233 chr7 93540133 93540133 1 + A G LUAD 93540132 + 93540112 93540152 41 GTTGTGAAGAAGTAAGAGATTACGTTGAAGAACGATCTGGC GTTGTGAAGAAGTAAGAGATTGCGTTGAAGAACGATCTGGC < 41bp 0.852517048575635 0.493780496829407 0.75431365 0.57111543 prediction 0.70503409715127 Functional Loss - GNGT1 ENSG00000127928 CDS Human protein_coding chr7:93540132 chr7:93540133 nonsynonymous SNV 0.876 4 22 hPsi_associated_SNPs_3816 0 0 0 0 1 chromatin 0.438694722623709 0.438777185977242 0.36639644 0 hPsi_site_9233 iPseU_CNN:0.36639644;iRNA_PseU:0 9234 chr11 55798291 55798291 1 + A G BLCA 55798290 + 55798270 55798310 41 ATCTGCAACCCACTGCTCTATACTACACTGATGTCTAGGAG ATCTGCAACCCACTGCTCTATGCTACACTGATGTCTAGGAG < 41bp 0.855064948497303 0.50254944398542 0.60264546 0.39878017 prediction 0.705031009023766 Functional Loss - OR5AS1 ENSG00000181785 CDS Human protein_coding chr11:55798290 chr11:55798291 nonsynonymous SNV 0.028 0 22 hPsi_associated_SNPs_3817 0 0 0 0 0 unknown 0.438718578764389 0.438718087284242 0.20529092 0 hPsi_site_9234 iPseU_CNN:0.20529092;iRNA_PseU:0 9235 chr9 106878527 106878527 1 + A G UCEC 106878526 + 106878506 106878546 41 GGGGGGAACTGAAACGTCGATACACTATAATTCCACTCAAT GGGGGGAACTGAAACGTCGATGCACTATAATTCCACTCAAT < 41bp 0.852493896985657 0.469985921377323 0.46140513 0.32283962 prediction 0.704987793971315 Functional Loss - SMC2 ENSG00000136824 CDS Human protein_coding chr9:106878526 chr9:106878527 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3818 0 0 1 0 2 Cytosol 0.438720362887258 0.438713841341591 0 0 hPsi_site_9235 iPseU_CNN:0;iRNA_PseU:0 9236 chr14 20344877 20344877 1 + A G rs373721514 20344876 + 20344856 20344896 41 CTCGTGGTGGCTTCCTGGATTATGGGAGTTATGCATTCAAT CTCGTGGTGGCTTCCTGGATTGTGGGAGTTATGCATTCAAT < 41bp 0.852455126407376 0.498897420560805 0.1902968 0.18271366 prediction 0.704910252814753 Functional Loss - OR4K2 ENSG00000165762 CDS Human protein_coding chr14:20344876 chr14:20344877 nonsynonymous SNV 0.934 0 22 hPsi_associated_SNPs_3819 0 0 0 0 0 unknown 0.438717790702613 0.438718616257234 0 0 hPsi_site_9236 iPseU_CNN:0;iRNA_PseU:0 9237 chr2 71591263 71591263 1 + A G UCEC 71591262 + 71591242 71591282 41 GCCATCGTTTCATTTCTAGATACAGATCCAGATCCAGATCC GCCATCGTTTCATTTCTAGATGCAGATCCAGATCCAGATCC < 41bp 0.866245274507014 0.513795499609589 0.6915137 0.43868577 prediction 0.704899549794851 Functional Loss - ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71591262 chr2:71591263 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3820 0 0 1 0 0 Nucleus 0.438718587734529 0.438718592953412 0.3830274 0 hPsi_site_9237 iPseU_CNN:0.3830274;iRNA_PseU:0 9238 chr14 59112850 59112850 1 + A G UCEC 59112849 + 59112829 59112869 41 GCCGCAGGAGAACAAAGTTGTACAGCCCCTGAAAAAGATGT GCCGCAGGAGAACAAAGTTGTGCAGCCCCTGAAAAAGATGT < 41bp 0.891259438175985 0.538815050926779 0.63373107 0.3801311 prediction 0.704888774498412 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112849 chr14:59112850 synonymous SNV . 0 22 hPsi_associated_SNPs_3821 0 0 0 0 0 exosome 0.438718584743807 0.438718097197654 0.26746214 0 hPsi_site_9238 iPseU_CNN:0.26746214;iRNA_PseU:0 9239 chr8 71573215 71573215 1 + A G rs570534575 71573214 + 71573194 71573234 41 TTGTAGAGACAGGGTCTTGCTATGTTGCCCAAGCTGGTCTT TTGTAGAGACAGGGTCTTGCTGTGTTGCCCAAGCTGGTCTT < 41bp 0.852432248038663 0.476611627274401 0.23768634 0.23940745 prediction 0.704864496077327 Functional Loss - LACTB2-AS1 ENSG00000246366 CDS Human antisense chr8:71573214 chr8:71573215 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_3822 0 0 0 0 0 unknown 0.43871859324865 0.438718896118864 0 0 hPsi_site_9239 iPseU_CNN:0;iRNA_PseU:0 9240 chr1 3545612 3545612 1 + A G rs1128474 3545611 + 3545591 3545631 41 CGAGTGCCTGCAGTTGCAAGTATGTTTACACCTGGTGTCCA CGAGTGCCTGCAGTTGCAAGTGTGTTTACACCTGGTGTCCA < 41bp 0.852430841708127 0.494263782306678 0.2860472 0.20735294 prediction 0.704861683416254 Functional Loss - TPRG1L ENSG00000158109 UTR3 Human protein_coding chr1:3545611 chr1:3545612 . . 0 22 hPsi_associated_SNPs_3823 0 0 0 7 0 Ribosome 0.441896101674864 0.457737643530209 0 0 hPsi_site_9240 iPseU_CNN:0;iRNA_PseU:0 9241 chr4 128584699 128584699 1 + A G ESCA 128584698 + 128584678 128584718 41 ACACTCCTCATATCATTATGTATCTCACACTACAGCTCGAC ACACTCCTCATATCATTATGTGTCTCACACTACAGCTCGAC < 41bp 0.852396995938849 0.46245841046422 0.86455715 0.31174174 prediction 0.704793991877697 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128584698 chr4:128584699 nonsynonymous SNV 0.672 1 22 hPsi_associated_SNPs_3824 0 0 1 1 1 nucleolus 0.438900795992354 0.438754324323951 0.7291143 0 hPsi_site_9241 iPseU_CNN:0.7291143;iRNA_PseU:0 9242 chr12 7044749 7044749 1 + A G HNSC 7044748 + 7044728 7044768 41 CAGTCTCCCTCCGATCTGGATAGCTTGGACGGGCGGAGCCT CAGTCTCCCTCCGATCTGGATGGCTTGGACGGGCGGAGCCT < 41bp 0.852341864152958 0.463870551049951 0.44515872 0.22361863 prediction 0.704683728305916 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7044748 chr12:7044749 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_3825 0 0 1 0 2 Endoplasmic reticulum 0.438718586123462 0.438726089938655 0 0 hPsi_site_9242 iPseU_CNN:0;iRNA_PseU:0 9243 chr11 55579121 55579121 1 + A G LUSC 55579120 + 55579100 55579140 41 CTCGGCTCCACACCCCCATGTACTTTTTCCTCAGCCACTTG CTCGGCTCCACACCCCCATGTGCTTTTTCCTCAGCCACTTG < 41bp 0.869550237417236 0.517216386417156 0.69043505 0.32218456 prediction 0.70466770200016 Functional Loss - OR5L1 ENSG00000186117 CDS Human other chr11:55579120 chr11:55579121 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_3826 0 0 0 0 0 unknown 0.4475401426024 0.434754510273694 0.3808701 0 hPsi_site_9243 iPseU_CNN:0.3808701;iRNA_PseU:0 9244 chr18 43417625 43417625 1 + A G rs569081026 43417624 + 43417604 43417644 41 TCTGGCGCGCGGGCGAGCCCTATGCGGGCCCGCAGGTGTTC TCTGGCGCGCGGGCGAGCCCTGTGCGGGCCCGCAGGTGTTC < 41bp 0.852329705670422 0.473707762502172 0.58194995 0.28419673 prediction 0.704659411340843 Functional Loss - SIGLEC15 ENSG00000197046 CDS Human protein_coding chr18:43417624 chr18:43417625 nonsynonymous SNV 0.841 2 22 hPsi_associated_SNPs_3827 0 0 0 0 0 exosome 0.438714076637537 0.438706694499291 0.1638999 0 hPsi_site_9244 iPseU_CNN:0.1638999;iRNA_PseU:0 9245 chr12 51639899 51639899 1 + A G rs114378235 51639898 + 51639878 51639918 41 GGTGAGGAAGACAACGGTGATAACAACTTGGAAAGGAGAGG GGTGAGGAAGACAACGGTGATGACAACTTGGAAAGGAGAGG < 41bp 0.852314562759439 0.48003611179302 0.24506187 0.2048954 prediction 0.704629125518877 Functional Loss - DAZAP2;SMAGP ENSG00000170545;ENSG00000183283 CDS Human other chr12:51639898 chr12:51639899 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3828 0 0 0 0 1 unknown 0.43827274397173 0.438718592483696 0 0 hPsi_site_9245 iPseU_CNN:0;iRNA_PseU:0 9246 chr12 69158609 69158609 1 + A G UCEC 69158608 + 69158588 69158628 41 CATTATTTGGCATTCTCGCCTATACCCACTTTAAGCTCAGT CATTATTTGGCATTCTCGCCTGTACCCACTTTAAGCTCAGT < 41bp 0.852301045154061 0.486260294787042 0.43538976 0.31238514 prediction 0.704602090308123 Functional Loss - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69158608 chr12:69158609 nonsynonymous SNV 0.843 5 22 hPsi_associated_SNPs_3829 0 0 1 0 0 nucleolus 0.438722191163061 0.438780121501682 0 0 hPsi_site_9246 iPseU_CNN:0;iRNA_PseU:0 9247 chr4 39246154 39246154 1 + A G UCEC 39246153 + 39246133 39246173 41 ACGATAAAGCAGCATCTGTTTACATCCGCTCTAAGAATTGG ACGATAAAGCAGCATCTGTTTGCATCCGCTCTAAGAATTGG < 41bp 0.880240725746614 0.527940667025171 0.6918369 0.26317573 prediction 0.704600117442887 Functional Loss - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39246153 chr4:39246154 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3830 0 0 0 0 2 Cytosol 0.438719816903709 0.438725878938082 0.3836738 0 hPsi_site_9247 iPseU_CNN:0.3836738;iRNA_PseU:0 9248 chr8 82195651 82195651 1 + A G HNSC 82195650 + 82195630 82195670 41 GCAATGGCCAAGCCAGATTGTATCATCACTTGTGATGGTAA GCAATGGCCAAGCCAGATTGTGTCATCACTTGTGATGGTAA < 41bp 0.877522171041221 0.525252950468819 0.6916432 0.39884377 prediction 0.704538441144804 Functional Loss - FABP5 ENSG00000164687 CDS Human protein_coding chr8:82195650 chr8:82195651 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_3831 0 0 0 0 1 Cytosol 0.437729172374149 0.437526107122284 0.3832864 0 hPsi_site_9248 iPseU_CNN:0.3832864;iRNA_PseU:0 9249 chr2 105716142 105716142 1 + A G SKCM 105716141 + 105716121 105716161 41 GCTGCAGCTGGACTACTTACTACTGATCCACGTGTGAGGGA GCTGCAGCTGGACTACTTACTGCTGATCCACGTGTGAGGGA < 41bp 0.878383589354132 0.526139379726784 0.6230156 0.2700429 prediction 0.704488419254695 Functional Loss - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105716141 chr2:105716142 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3832 0 0 1 0 1 Ribosome 0.438787979569188 0.438800276875958 0.2460312 0 hPsi_site_9249 iPseU_CNN:0.2460312;iRNA_PseU:0 9250 chr9 130488592 130488592 1 + A G COAD 130488591 + 130488571 130488611 41 AGAAGGCCCAGTACTACCTGTACCGGGCCAAGAGCCGGCAG AGAAGGCCCAGTACTACCTGTGCCGGGCCAAGAGCCGGCAG < 41bp 0.852241194090146 0.453178190896535 0.73883 0.26860273 prediction 0.704482388180292 Functional Loss - TTC16 ENSG00000167094 CDS Human protein_coding chr9:130488591 chr9:130488592 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_3833 0 0 0 0 2 exosome 0.438717913178198 0.438718592879721 0.47766 0 hPsi_site_9250 iPseU_CNN:0.47766;iRNA_PseU:0 9251 chr3 142840207 142840207 1 + A G rs146718778 142840206 + 142840186 142840226 41 CTCGTCGTTCTTCGGCGAGCTATTCAACCAGAATCCCGAGG CTCGTCGTTCTTCGGCGAGCTGTTCAACCAGAATCCCGAGG < 41bp 0.852216827730392 0.459519246360613 0.79042256 0.346068 prediction 0.704433655460785 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840206 chr3:142840207 synonymous SNV . 0 22 hPsi_associated_SNPs_3834 0 0 0 0 0 cytosol 0.438731915515606 0.437896865569413 0.58084512 0 hPsi_site_9251 iPseU_CNN:0.58084512;iRNA_PseU:0 9252 chr2 239013338 239013338 1 + A C rs111369122 239013337 + 239013317 239013357 41 GCAGTGGCGCCTCCCCACTCTACCTGGCCTGCCAGGAGGGC GCAGTGGCGCCTCCCCACTCTCCCTGGCCTGCCAGGAGGGC < 41bp 0.857050454084167 0.504841985476292 0.71048546 0.27356642 prediction 0.704416937215749 Functional Loss - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239013337 chr2:239013338 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3835 0 0 1 0 1 exosome 0.438589735608893 0.438717979894636 0.42097092 0 hPsi_site_9252 iPseU_CNN:0.42097092;iRNA_PseU:0 9253 chr12 53647792 53647792 1 + A G UCEC 53647791 + 53647771 53647811 41 TCTGCACTCACTGGCTTGCCTAGGGCTCCTTGTCCTCCATG TCTGCACTCACTGGCTTGCCTGGGGCTCCTTGTCCTCCATG < 41bp 0.852181839488447 0.475866870290634 0.35580486 0.24938416 prediction 0.704363678976894 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647791 chr12:53647792 synonymous SNV . 0 22 hPsi_associated_SNPs_3836 0 0 1 0 0 Endoplasmic reticulum 0.438719027868473 0.438718563000732 0 0 hPsi_site_9253 iPseU_CNN:0;iRNA_PseU:0 9254 chr11 124751196 124751196 1 + A G rs141650448 124751195 + 124751175 124751215 41 AGTGCCACGGGGAAGGGGAGTAGGGATGTCTTTTCCCCCCC AGTGCCACGGGGAAGGGGAGTGGGGATGTCTTTTCCCCCCC < 41bp 0.868134887204028 0.515954717521307 0.3325615 0.2743315 prediction 0.704360339365443 Functional Loss - ROBO3 ENSG00000154134 UTR3 Human protein_coding chr11:124751195 chr11:124751196 . . 0 22 hPsi_associated_SNPs_3837 0 0 1 0 1 exosome 0.438718823210792 0.438718592995102 0 0 hPsi_site_9254 iPseU_CNN:0;iRNA_PseU:0 9255 chr16 71406084 71406084 1 + A G rs144800285 71406083 + 71406063 71406103 41 GTATATTGAAGGTAAAGAGCTAGAAAACTTTTTCCAAGAGC GTATATTGAAGGTAAAGAGCTGGAAAACTTTTTCCAAGAGC < 41bp 0.85217441467588 0.465084733410768 0.5284962 0.35387725 prediction 0.70434882935176 Functional Loss - CALB2 ENSG00000172137 CDS Human protein_coding chr16:71406083 chr16:71406084 synonymous SNV . 0 22 hPsi_associated_SNPs_3838 0 0 0 0 2 Ribosome 0.438711553394939 0.438718567092486 0.0569923999999999 0 hPsi_site_9255 iPseU_CNN:0.0569923999999999;iRNA_PseU:0 9256 chr1 160389198 160389198 1 + A G SKCM 160389197 + 160389177 160389217 41 TGGTCTCCTACTGGCTCTTCTATGGTGTGCGCATCCTGGAT TGGTCTCCTACTGGCTCTTCTGTGGTGTGCGCATCCTGGAT < 41bp 0.852136715591386 0.45714365565789 0.55635875 0.56443 prediction 0.704273431182772 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160389197 chr1:160389198 nonsynonymous SNV 0.972 5 22 hPsi_associated_SNPs_3839 0 0 1 0 0 exosome 0.438719262199379 0.438720193769641 0 0 hPsi_site_9256 iPseU_CNN:0;iRNA_PseU:0 9257 chr16 31193944 31193944 1 + A G UVM 31193943 + 31193923 31193963 41 AGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCT AGTCCACGGACACTTCAGGCTGTGGCCAGAGCAGCTATTCT < 41bp 0.892082413151937 0.539948986751229 0.29462105 0.2117204 prediction 0.704266852801415 Functional Loss - FUS ENSG00000089280 CDS Human protein_coding chr16:31193943 chr16:31193944 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3840 0 0 1 0 1 Cytosol 0.438724877821434 0.438796088427081 0 0 hPsi_site_9257 iPseU_CNN:0;iRNA_PseU:0 9258 chr8 99158858 99158858 1 + A G rs373298124 99158857 + 99158837 99158877 41 GTGGAATGTACGCATAGCTTTATCTGGAACCAAGATATCTG GTGGAATGTACGCATAGCTTTGTCTGGAACCAAGATATCTG < 41bp 0.852117849364965 0.452464751189572 0.33346903 0.26388007 prediction 0.704235698729929 Functional Loss - POP1 ENSG00000104356 CDS Human protein_coding chr8:99158857 chr8:99158858 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3841 0 0 0 0 2 Mitochondrion 0.438718592995102 0.438718592995102 0 0 hPsi_site_9258 iPseU_CNN:0;iRNA_PseU:0 9259 chr6 26385302 26385302 1 + A G UCEC 26385301 + 26385281 26385321 41 GCCATGGTGGGAGAAAACACTACATTACGCTGCCATCTGTC GCCATGGTGGGAGAAAACACTGCATTACGCTGCCATCTGTC < 41bp 0.852114365696823 0.457513018538836 0.5166305 0.36759368 prediction 0.704228731393646 Functional Loss - BTN2A2 ENSG00000124508 CDS Human protein_coding chr6:26385301 chr6:26385302 nonsynonymous SNV 0.138 0 22 hPsi_associated_SNPs_3842 0 0 0 0 1 Endoplasmic reticulum 0.440522877764755 0.437918958994536 0.033261 0 hPsi_site_9259 iPseU_CNN:0.033261;iRNA_PseU:0 9260 chrX 68750258 68750258 1 + A G rs41306119 68750257 + 68750237 68750277 41 TTCCCTCCTGCCCATATCCCTACAGGCGACGGCAGACAGTG TTCCCTCCTGCCCATATCCCTGCAGGCGACGGCAGACAGTG < 41bp 0.852057638105352 0.461068723773838 0.45094484 0.2604397 prediction 0.704115276210703 Functional Loss - FAM155B ENSG00000130054 UTR3 Human protein_coding chrX:68750257 chrX:68750258 . . 0 22 hPsi_associated_SNPs_3843 0 0 0 1 0 exosome 0.438718479344635 0.438659755750591 0 0 hPsi_site_9260 iPseU_CNN:0;iRNA_PseU:0 9261 chr17 4837744 4837744 1 + T C LUSC 4837745 - 4837725 4837765 41 TAGAGGCCCCACACGGCCATTAGGCCGTACCCACAGGAAGA TAGAGGCCCCACACGGCCATTGGGCCGTACCCACAGGAAGA < 41bp 0.870492607208197 0.518437504346303 0.5684334 0.22600046 prediction 0.704110205723789 Functional Loss - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4837745 chr17:4837744 synonymous SNV . 0 22 hPsi_associated_SNPs_3844 0 0 0 0 0 exosome 0.438717712379371 0.438708410361809 0.1368668 0 hPsi_site_9261 iPseU_CNN:0.1368668;iRNA_PseU:0 9262 chr8 66621267 66621267 1 + A G STAD 66621266 + 66621246 66621286 41 GAAGGCTTTAATTGAAAATGTATCAGACTCCTAATAGACAA GAAGGCTTTAATTGAAAATGTGTCAGACTCCTAATAGACAA < 41bp 0.852043587760381 0.483897527030863 0.6147044 0.3071133 prediction 0.704087175520762 Functional Loss - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66621266 chr8:66621267 synonymous SNV . 0 22 hPsi_associated_SNPs_3845 0 0 1 0 1 Cytosol 0.438718696093298 0.438719687805688 0.2294088 0 hPsi_site_9262 iPseU_CNN:0.2294088;iRNA_PseU:0 9263 chr16 68293136 68293136 1 + A G STAD 68293135 + 68293115 68293155 41 CCACCAGCTGGCTGCTGCCCTACAACTACACATGGTCACCT CCACCAGCTGGCTGCTGCCCTGCAACTACACATGGTCACCT < 41bp 0.852030802949398 0.461729576612425 0.6990654 0.29344934 prediction 0.704061605898796 Functional Loss - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68293135 chr16:68293136 nonsynonymous SNV 0.755 4 22 hPsi_associated_SNPs_3846 0 0 0 0 1 Ribosome 0.438710948417013 0.438681249747776 0.3981308 0 hPsi_site_9263 iPseU_CNN:0.3981308;iRNA_PseU:0 9264 chr21 42812836 42812836 1 + A G COAD 42812835 + 42812815 42812855 41 TCAAGACACTCATCAAGAAGTACATCCAGAGGCAGGAGACA TCAAGACACTCATCAAGAAGTGCATCCAGAGGCAGGAGACA < 41bp 0.852002228878639 0.475656173424319 0.45021483 0.28328383 prediction 0.704004457757277 Functional Loss - MX1 ENSG00000157601 CDS Human protein_coding chr21:42812835 chr21:42812836 nonsynonymous SNV 0.893 5 22 hPsi_associated_SNPs_3847 0 0 0 0 1 exosome 0.438730552349992 0.438718814982702 0 0 hPsi_site_9264 iPseU_CNN:0;iRNA_PseU:0 9265 chr1 204379080 204379080 1 + T C LUAD 204379081 - 204379061 204379101 41 CTTTCTGCAGTGTAGATCCTTATAATCCCCAGAACTTTACA CTTTCTGCAGTGTAGATCCTTGTAATCCCCAGAACTTTACA < 41bp 0.856115931097864 0.504115936291548 0.7408751 0.7276973 prediction 0.703999989612633 Functional Loss - PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204379081 chr1:204379080 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_3848 0 0 1 0 0 Ribosome 0.43868170956622 0.4382290103444 0.0263556 0 hPsi_site_9265 iPseU_CNN:0.0263556;iRNA_PseU:0 9266 chr10 50819397 50819397 1 + A G COAD 50819396 + 50819376 50819416 41 TAGCCATGATCGCCGATAAGTACCCGGAGGAGCCGGAGCGC TAGCCATGATCGCCGATAAGTGCCCGGAGGAGCCGGAGCGC < 41bp 0.86588082740555 0.513914630891387 0.7005083 0.23791113 prediction 0.703932393028325 Functional Loss - SLC18A3 ENSG00000187714 CDS Human protein_coding chr10:50819396 chr10:50819397 nonsynonymous SNV 0.927 3 22 hPsi_associated_SNPs_3849 0 0 0 0 0 exosome 0.438718291198314 0.438718513621781 0.4010166 0 hPsi_site_9266 iPseU_CNN:0.4010166;iRNA_PseU:0 9267 chr12 106734697 106734697 1 + A G SKCM 106734696 + 106734676 106734716 41 GGAAAGAGGTTTACCCACTTTAAATGCTGAGATTCAAGCTA GGAAAGAGGTTTACCCACTTTGAATGCTGAGATTCAAGCTA < 41bp 0.851940996859305 0.490453526783131 0.6056695 0.38728982 prediction 0.703881993718611 Functional Loss - TCP11L2 ENSG00000166046 CDS Human protein_coding chr12:106734696 chr12:106734697 synonymous SNV . 0 22 hPsi_associated_SNPs_3850 0 0 0 0 2 nucleus 0.438718592653152 0.438920620509789 0.211339 0 hPsi_site_9267 iPseU_CNN:0.211339;iRNA_PseU:0 9268 chr2 88409902 88409902 1 + A G COAD 88409901 + 88409881 88409921 41 GGTGCAGACGGAGATGGAGCTACGCATGTTCCGCCAGAACG GGTGCAGACGGAGATGGAGCTGCGCATGTTCCGCCAGAACG < 41bp 0.851925281799094 0.468042788707093 0.6435312 0.26095188 prediction 0.703850563598188 Functional Loss - SMYD1 ENSG00000115593 CDS Human protein_coding chr2:88409901 chr2:88409902 synonymous SNV . 0 22 hPsi_associated_SNPs_3851 0 0 0 0 1 exosome 0.438687174169912 0.438578616683741 0.2870624 0 hPsi_site_9268 iPseU_CNN:0.2870624;iRNA_PseU:0 9269 chrX 45385636 45385636 1 + A G rs181143809 45385635 + 45385615 45385655 41 TCCGCCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCTTCC TCCGCCTCCCAGGTTCAAGCTGTTCTCCTGCTTCAGCTTCC < 41bp 0.870839030315152 0.518936501218231 0.41976663 0.2305178 prediction 0.703805058193841 Functional Loss - LINC01204 ENSG00000229563 ncRNA_exonic Human lincRNA chrX:45385635 chrX:45385636 . . 0 22 hPsi_associated_SNPs_3852 0 0 0 0 0 unknown 0.438721207397825 0.438714559972858 0 0 hPsi_site_9269 iPseU_CNN:0;iRNA_PseU:0 9270 chr1 175086168 175086168 1 + A G LUSC 175086167 + 175086147 175086187 41 TGCGGGCCACCATTGACAGGTATGTGGTGCGCTACACCTCT TGCGGGCCACCATTGACAGGTGTGTGGTGCGCTACACCTCT < 41bp 0.851898429379762 0.460499267520775 0.42006505 0.2640109 prediction 0.703796858759523 Functional Loss - TNN ENSG00000120332 CDS Human protein_coding chr1:175086167 chr1:175086168 nonsynonymous SNV 0.223 4 22 hPsi_associated_SNPs_3853 0 0 0 0 1 exosome 0.438624951084551 0.438477757942345 0 0 hPsi_site_9270 iPseU_CNN:0;iRNA_PseU:0 9271 chr22 35478540 35478540 1 + A G UCEC 35478539 + 35478519 35478559 41 AAGAGCAAGCGGAGGGTTCGTACCACCTTCACCACTGAGCA AAGAGCAAGCGGAGGGTTCGTGCCACCTTCACCACTGAGCA < 41bp 0.889642621364652 0.537747962891404 0.7396084 0.29507738 prediction 0.703789316946497 Functional Loss - ISX ENSG00000175329 CDS Human protein_coding chr22:35478539 chr22:35478540 nonsynonymous SNV 0.888 5 22 hPsi_associated_SNPs_3854 0 0 0 0 1 chromatin 0.438710342576816 0.438715211391085 0.4792168 0 hPsi_site_9271 iPseU_CNN:0.4792168;iRNA_PseU:0 9272 chr1 27099395 27099395 1 + A G HNSC 27099394 + 27099374 27099414 41 CCATGACTCCAAACCCTGGGTATCAGCCCAGTATGAATACC CCATGACTCCAAACCCTGGGTGTCAGCCCAGTATGAATACC < 41bp 0.88451726913127 0.532660011086559 0.14573655 0.12252614 prediction 0.703714516089424 Functional Loss - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27099394 chr1:27099395 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3855 0 0 1 0 2 Nucleus 0.438718593039111 0.438718643310566 0 0 hPsi_site_9272 iPseU_CNN:0;iRNA_PseU:0 9273 chr2 219612322 219612322 1 + A G HNSC 219612321 + 219612301 219612341 41 TGGCCTTTGTCCTATGTAGGTATCTACACAAACCCTACCTC TGGCCTTTGTCCTATGTAGGTGTCTACACAAACCCTACCTC < 41bp 0.890149696326149 0.538319495713575 0.6365638 0.27814233 prediction 0.703660401225149 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219612321 chr2:219612322 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3856 0 0 1 0 1 Cytosol 0.43873114515301 0.438673417637228 0.2731276 0 hPsi_site_9273 iPseU_CNN:0.2731276;iRNA_PseU:0 9274 chr3 186303135 186303135 1 + A G CESC 186303134 + 186303114 186303154 41 TTGTTCATTCTTTCTTCAGGTATCAAACAGCTACTGAAACA TTGTTCATTCTTTCTTCAGGTGTCAAACAGCTACTGAAACA < 41bp 0.851808932382554 0.487246688790214 0.6586827 0.29974514 prediction 0.703617864765108 Functional Loss - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186303134 chr3:186303135 nonsynonymous SNV 0.710 0 22 hPsi_associated_SNPs_3857 0 0 1 0 1 Ribosome 0.438653902713874 0.438687112969739 0.3173654 0 hPsi_site_9274 iPseU_CNN:0.3173654;iRNA_PseU:0 9275 chr6 142737130 142737130 1 + A G UCEC 142737129 + 142737109 142737149 41 GGCTAGAAGCAATTCACATGTACATTGCTCTAGTTAAAGTA GGCTAGAAGCAATTCACATGTGCATTGCTCTAGTTAAAGTA < 41bp 0.878997654616792 0.527230940701019 0.29957688 0.18174541 prediction 0.703533427831546 Functional Loss - ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142737129 chr6:142737130 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3858 0 0 1 0 1 Ribosome 0.438722348261708 0.438810214089109 0 0 hPsi_site_9275 iPseU_CNN:0;iRNA_PseU:0 9276 chr19 57909869 57909869 1 + A G PAAD 57909868 + 57909848 57909888 41 TCTGTAGGAGTGTCAGAGGTTACAGCTTCAAAGCCCTGTCT TCTGTAGGAGTGTCAGAGGTTGCAGCTTCAAAGCCCTGTCT < 41bp 0.869766857995775 0.518077361094259 0.588723 0.3160367 prediction 0.703378993803032 Functional Loss - ZNF548 ENSG00000188785;ENSG00000268133 CDS Human other chr19:57909868 chr19:57909869 nonsynonymous SNV 0.018 1 22 hPsi_associated_SNPs_3859 0 0 1 0 1 Nucleus 0.438718590924954 0.438718592988043 0.177446 0 hPsi_site_9276 iPseU_CNN:0.177446;iRNA_PseU:0 9277 chr16 81385286 81385286 1 + A G UCEC 81385285 + 81385265 81385305 41 TTATGAGAGAGATCCTGGATTACATCTTCAGTGGGCAGGTA TTATGAGAGAGATCCTGGATTGCATCTTCAGTGGGCAGGTA < 41bp 0.85168446401764 0.473054347137417 0.559869 0.37658054 prediction 0.703368928035281 Functional Loss - GAN ENSG00000261609 CDS Human protein_coding chr16:81385285 chr16:81385286 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3860 0 0 1 0 2 Ribosome 0.438718771992891 0.438715957714454 0.119738 0 hPsi_site_9277 iPseU_CNN:0.119738;iRNA_PseU:0 9278 chr6 10728899 10728899 1 + A G LIHC 10728898 + 10728878 10728918 41 TCTGGTACCTTGGCTGGCATTATGGGAATGAGGTTCTACCA TCTGGTACCTTGGCTGGCATTGTGGGAATGAGGTTCTACCA < 41bp 0.851677595123604 0.47341648590605 0.2016997 0.18535385 prediction 0.703355190247208 Functional Loss - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10728898 chr6:10728899 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_3861 0 0 1 0 2 Ribosome 0.447096579262018 0.440119431517381 0 0 hPsi_site_9278 iPseU_CNN:0;iRNA_PseU:0 9279 chr16 22337554 22337554 1 + A G LUSC 22337553 + 22337533 22337573 41 CGGCATCTCGGACCGCATGCTACAGGACACGGTGCTGGCCG CGGCATCTCGGACCGCATGCTGCAGGACACGGTGCTGGCCG < 41bp 0.851666847290921 0.461936738306419 0.88646936 0.3739881 prediction 0.703333694581842 Functional Loss - POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337553 chr16:22337554 synonymous SNV . 0 22 hPsi_associated_SNPs_3862 0 0 1 0 1 Ribosome 0.439086484917214 0.434315089510571 0.77293872 0 hPsi_site_9279 iPseU_CNN:0.77293872;iRNA_PseU:0 9280 chr3 100467413 100467413 1 + A G rs113590781 100467412 + 100467392 100467432 41 CAATTAATGTAGCTGCTAGCTATTGGCCTCCCAAAAGACTC CAATTAATGTAGCTGCTAGCTGTTGGCCTCCCAAAAGACTC < 41bp 0.86714961751683 0.515491081169423 0.271461 0.20203865 prediction 0.703317072694814 Functional Loss - TFG ENSG00000114354 UTR3 Human protein_coding chr3:100467412 chr3:100467413 . . 0 22 hPsi_associated_SNPs_3863 0 0 0 0 0 Cytosol 0.438708184874619 0.438551643404086 0 0 hPsi_site_9280 iPseU_CNN:0;iRNA_PseU:0 9281 chr22 20079400 20079400 1 + A G COAD 20079399 + 20079379 20079419 41 CTTTTTGTCACAGAGTTTGTTATTAACCCCAACGGGAAATC CTTTTTGTCACAGAGTTTGTTGTTAACCCCAACGGGAAATC < 41bp 0.889103206829729 0.537470328655229 0.58763343 0.30420512 prediction 0.703265756349001 Functional Loss - DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079399 chr22:20079400 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3864 0 0 1 0 1 Nucleus 0.438718646238435 0.438719921289682 0.17526686 0 hPsi_site_9281 iPseU_CNN:0.17526686;iRNA_PseU:0 9282 chr19 54444823 54444823 1 + A G STAD 54444822 + 54444802 54444842 41 AGCAGTATTTTCATTATCGCTACGGGTGGTCTTTTGCCTTC AGCAGTATTTTCATTATCGCTGCGGGTGGTCTTTTGCCTTC < 41bp 0.851621986174707 0.457078477917611 0.46879962 0.2018083 prediction 0.703243972349414 Functional Loss - CACNG7 ENSG00000105605 CDS Human protein_coding chr19:54444822 chr19:54444823 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_3865 0 0 0 0 2 unknown 0.436639366637906 0.438297906124998 0 0 hPsi_site_9282 iPseU_CNN:0;iRNA_PseU:0 9283 chr13 96086218 96086218 1 + A G COAD 96086217 + 96086197 96086237 41 TGATAACAGCCACTTGGGTTTACCAGGGTCTGTGGATGAAC TGATAACAGCCACTTGGGTTTGCCAGGGTCTGTGGATGAAC < 41bp 0.851607908553908 0.472171094601044 0.39307675 0.28535658 prediction 0.703215817107817 Functional Loss - CLDN10 ENSG00000134873 CDS Human protein_coding chr13:96086217 chr13:96086218 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_3866 0 0 0 0 2 Endoplasmic reticulum 0.438719217456884 0.43871995883697 0 0 hPsi_site_9283 iPseU_CNN:0;iRNA_PseU:0 9284 chr1 23408804 23408804 1 + A G ESCA 23408803 + 23408783 23408823 41 CAGGATCATCTGGAAATGACTATGATTTAATGGCTCAGCCA CAGGATCATCTGGAAATGACTGTGATTTAATGGCTCAGCCA < 41bp 0.879783410956892 0.528192527021807 0.58148265 0.35990462 prediction 0.70318176787017 Functional Loss - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23408803 chr1:23408804 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3867 0 0 1 0 2 Cytosol 0.438799690572471 0.440032072411169 0.1629653 0 hPsi_site_9284 iPseU_CNN:0.1629653;iRNA_PseU:0 9285 chr1 21889607 21889607 1 + A G UCEC 21889606 + 21889586 21889626 41 TCCTCTCCCACCTGCAGACGTACAACACCAATGCCCAGGTC TCCTCTCCCACCTGCAGACGTGCAACACCAATGCCCAGGTC < 41bp 0.851545532056113 0.457671523541678 0.86857986 0.7184507 prediction 0.703091064112225 Functional Loss - ALPL ENSG00000162551 CDS Human protein_coding chr1:21889606 chr1:21889607 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_3868 0 0 0 0 1 Endoplasmic reticulum 0.438717596773958 0.438716670239272 0.30025832 0 hPsi_site_9285 iPseU_CNN:0.30025832;iRNA_PseU:0 9286 chr11 119003611 119003611 1 + A G LUSC 119003610 + 119003590 119003630 41 GACCTCCAGAAGCACCTGGATACCCACAGCGAGGAGCCAGC GACCTCCAGAAGCACCTGGATGCCCACAGCGAGGAGCCAGC < 41bp 0.851532660845227 0.443857400866332 0.67521405 0.24691907 prediction 0.703065321690454 Functional Loss - HINFP ENSG00000172273 CDS Human protein_coding chr11:119003610 chr11:119003611 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_3869 0 0 1 0 1 Cytosol 0.437793575094689 0.43584471516799 0.3504281 0 hPsi_site_9286 iPseU_CNN:0.3504281;iRNA_PseU:0 9287 chr22 24515613 24515613 1 + A G HNSC 24515612 + 24515592 24515632 41 TGAGCCGCTTCCCCCAGCACTATAAGAGTCTCTACCGTCTG TGAGCCGCTTCCCCCAGCACTGTAAGAGTCTCTACCGTCTG < 41bp 0.851531955813272 0.469214227102071 0.6869056 0.57722276 prediction 0.703063911626543 Functional Loss - CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24515612 chr22:24515613 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3870 0 0 1 0 1 Cytosol 0.438689865151696 0.438716061060807 0.21936568 0 hPsi_site_9287 iPseU_CNN:0.21936568;iRNA_PseU:0 9288 chr17 76201182 76201182 1 + A G rs61742958 76201181 + 76201161 76201201 41 TGACCCCTCCCAGGGGAATTTACCTGTGTGGACACTCAGCC TGACCCCTCCCAGGGGAATTTGCCTGTGTGGACACTCAGCC < 41bp 0.851503064254675 0.445799739122133 0.37832564 0.26547062 prediction 0.703006128509349 Functional Loss - AFMID ENSG00000183077 CDS Human protein_coding chr17:76201181 chr17:76201182 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_3871 0 0 1 0 2 Nucleus 0.43871677608239 0.43870952190781 0 0 hPsi_site_9288 iPseU_CNN:0;iRNA_PseU:0 9289 chr11 63979191 63979191 1 + A C BRCA 63979190 + 63979170 63979210 41 CACTCTGGCTGCGCTTCAAGTACTACAGCTTCTTCGATTTG CACTCTGGCTGCGCTTCAAGTCCTACAGCTTCTTCGATTTG < 41bp 0.851463559416905 0.492274588250276 0.82687175 0.3368076 prediction 0.70292711883381 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63979190 chr11:63979191 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3872 0 0 0 0 2 Cytosol 0.438516461275523 0.438718596204892 0.6537435 0 hPsi_site_9289 iPseU_CNN:0.6537435;iRNA_PseU:0 9290 chr11 5474845 5474845 1 + A G UCEC 5474844 + 5474824 5474864 41 GCTGTGGCCCTTGGGGGAAATACAGTGATCCTGCAGGCTGT GCTGTGGCCCTTGGGGGAAATGCAGTGATCCTGCAGGCTGT < 41bp 0.851457744924361 0.488107678025172 0.2695451 0.20086634 prediction 0.702915489848721 Functional Loss - OR51I2 ENSG00000187918 CDS Human protein_coding chr11:5474844 chr11:5474845 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_3873 0 0 0 0 0 nucleus 0.438803587343686 0.437723688977806 0 0 hPsi_site_9290 iPseU_CNN:0;iRNA_PseU:0 9291 chr11 59211053 59211053 1 + A G HNSC 59211052 + 59211032 59211072 41 AGCCCCCTTCTCTACCCCACTATCATGACCCAGGGCCTCTG AGCCCCCTTCTCTACCCCACTGTCATGACCCAGGGCCTCTG < 41bp 0.851450788119239 0.470031196177002 0.3360673 0.26469356 prediction 0.702901576238478 Functional Loss - OR5A1 ENSG00000172320 CDS Human protein_coding chr11:59211052 chr11:59211053 nonsynonymous SNV 0.778 0 22 hPsi_associated_SNPs_3874 0 0 0 0 0 unknown 0.438718592996431 0.438718593001426 0 0 hPsi_site_9291 iPseU_CNN:0;iRNA_PseU:0 9292 chr11 118828942 118828942 1 + A G rs623500 118828941 + 118828921 118828961 41 TGGCACTGGGCTCCCGCAAGTAAGGAGGTCTGCCCGGAGCA TGGCACTGGGCTCCCGCAAGTGAGGAGGTCTGCCCGGAGCA < 41bp 0.851446047667198 0.487528118472636 0.6015231 0.54532975 prediction 0.702892095334396 Functional Loss - UPK2 ENSG00000110375 CDS Human protein_coding chr11:118828941 chr11:118828942 synonymous SNV . 0 22 hPsi_associated_SNPs_3875 0 0 0 0 0 exosome 0.438718588059413 0.438719524000455 0.1123867 0 hPsi_site_9292 iPseU_CNN:0.1123867;iRNA_PseU:0 9293 chr11 18194964 18194964 1 + A G rs1869788 18194963 + 18194943 18194983 41 TTGTGCTCTGGCTCCTGGGCTACCGCATGCGCAGGAACGCT TTGTGCTCTGGCTCCTGGGCTGCCGCATGCGCAGGAACGCT < 41bp 0.851438380843286 0.4649241918776 0.6138159 0.31025264 prediction 0.702876761686573 Functional Loss - MRGPRX4 ENSG00000179817 CDS Human protein_coding chr11:18194963 chr11:18194964 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_3876 0 0 0 0 0 unknown 0.438718956123631 0.438925138981299 0.2276318 0 hPsi_site_9293 iPseU_CNN:0.2276318;iRNA_PseU:0 9294 chr3 48423521 48423521 1 + A G STAD 48423520 + 48423500 48423540 41 AAGAAGGAGGCCGCCATCCATACCTCAGGAGCTGCTGTCAC AAGAAGGAGGCCGCCATCCATGCCTCAGGAGCTGCTGTCAC < 41bp 0.851397215398006 0.456377423394092 0.7423866 0.4173112 prediction 0.702794430796013 Functional Loss - FBXW12 ENSG00000164049 CDS Human protein_coding chr3:48423520 chr3:48423521 nonsynonymous SNV 0.293 2 22 hPsi_associated_SNPs_3877 0 0 0 0 2 exosome 0.437109379195958 0.438122248810773 0.4847732 0 hPsi_site_9294 iPseU_CNN:0.4847732;iRNA_PseU:0 9295 chr4 5747007 5747007 1 + A G UCEC 5747006 + 5746986 5747026 41 CGGGGGCTGGTGACTCTGAGTACATCACCCTGGCTGATGTG CGGGGGCTGGTGACTCTGAGTGCATCACCCTGGCTGATGTG < 41bp 0.881441425226075 0.53005921119771 0.76058465 0.33695716 prediction 0.70276442805673 Functional Loss - EVC ENSG00000072840 CDS Human protein_coding chr4:5747006 chr4:5747007 nonsynonymous SNV 0.011 2 22 hPsi_associated_SNPs_3878 0 0 0 0 2 Nucleus 0.438719578766554 0.438719296298741 0.5211693 0 hPsi_site_9295 iPseU_CNN:0.5211693;iRNA_PseU:0 9296 chr10 135053784 135053784 1 + A G rs148086757 135053783 + 135053763 135053803 41 GGGCCCCGGGGCCTGTGTGCTATGCCACAGACGGGGGATGC GGGCCCCGGGGCCTGTGTGCTGTGCCACAGACGGGGGATGC < 41bp 0.851286069772839 0.468787119261871 0.766664 0.68674845 prediction 0.702572139545678 Functional Loss - VENTX ENSG00000151650 CDS Human protein_coding chr10:135053783 chr10:135053784 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_3879 0 0 0 0 0 Nucleus 0.439303292421381 0.440880851996482 0.1598311 0 hPsi_site_9296 iPseU_CNN:0.1598311;iRNA_PseU:0 9297 chr1 107599766 107599766 1 + A G LGG 107599765 + 107599745 107599785 41 GCCGGGACCAGTGGAGACTGTAGAGTTGCCGGAACAGGTGG GCCGGGACCAGTGGAGACTGTGGAGTTGCCGGAACAGGTGG < 41bp 0.868910358911272 0.51763780813079 0.65903324 0.33590585 prediction 0.702545101560963 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599765 chr1:107599766 synonymous SNV . 0 22 hPsi_associated_SNPs_3880 0 0 1 0 0 Ribosome 0.440382136825741 0.438398378810715 0.31806648 0 hPsi_site_9297 iPseU_CNN:0.31806648;iRNA_PseU:0 9298 chr11 34969112 34969112 1 + A G rs11539202 34969111 + 34969091 34969131 41 GAGACTGACAAAGCTGTGGTTACCTTAGATGCAAGTGATGA GAGACTGACAAAGCTGTGGTTGCCTTAGATGCAAGTGATGA < 41bp 0.888330365381639 0.537065101454387 0.8454698 0.41228983 prediction 0.702530527854504 Functional Loss - PDHX ENSG00000110435 CDS Human protein_coding chr11:34969111 chr11:34969112 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_3881 1 0 1 0 2 Ribosome 0.443137167173064 0.438186679352733 0.6909396 0 hPsi_site_9298 iPseU_CNN:0.6909396;iRNA_PseU:0 9299 chr22 30762165 30762165 1 + A G UCEC 30762164 + 30762144 30762184 41 TGGTGGCCCTGCTGGAGCACTATGACCATGTTCCGGGTGAC TGGTGGCCCTGCTGGAGCACTGTGACCATGTTCCGGGTGAC < 41bp 0.883591051588241 0.532355558755685 0.36897567 0.26608753 prediction 0.702470985665113 Functional Loss - CCDC157 ENSG00000187860 CDS Human protein_coding chr22:30762164 chr22:30762165 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3882 0 0 0 0 1 exosome 0.440634938377749 0.439133920885652 0 0 hPsi_site_9299 iPseU_CNN:0;iRNA_PseU:0 9300 chrX 102612792 102612792 1 + A G UCEC 102612791 + 102612771 102612811 41 CCAGGAGTTTAAAGAAGATATACACAACAGGCATTTAAGCA CCAGGAGTTTAAAGAAGATATGCACAACAGGCATTTAAGCA < 41bp 0.860449858850712 0.509218368741531 0.6554861 0.36085528 prediction 0.702462980218362 Functional Loss - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612791 chrX:102612792 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3883 0 0 1 0 0 Cytosol 0.438725552645094 0.438718721019913 0.3109722 0 hPsi_site_9300 iPseU_CNN:0.3109722;iRNA_PseU:0 9301 chr11 71259822 71259822 1 + A G rs10792769 71259821 + 71259801 71259841 41 CCAGCTGCTGTGCACCCGTCTACTGCTGCAAGCCCGTGTGC CCAGCTGCTGTGCACCCGTCTGCTGCTGCAAGCCCGTGTGC < 41bp 0.851189511818623 0.470720800792999 0.7672137 0.5187927 prediction 0.702379023637246 Functional Loss - KRTAP5-9 ENSG00000254997 CDS Human protein_coding chr11:71259821 chr11:71259822 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_3884 0 0 0 0 0 exosome 0.438718751625486 0.438718663804314 0.496842 0 hPsi_site_9301 iPseU_CNN:0.496842;iRNA_PseU:0 9302 chr1 155007182 155007182 1 + A G SKCM 155007181 + 155007161 155007201 41 ATCTACGAAGAACAGAAGATTATGTTCTTGTACAGCTTGGT ATCTACGAAGAACAGAAGATTGTGTTCTTGTACAGCTTGGT < 41bp 0.877612529848582 0.52644070769092 0.3025579 0.22561958 prediction 0.702343644315324 Functional Loss - DCST1 ENSG00000163357 CDS Human protein_coding chr1:155007181 chr1:155007182 nonsynonymous SNV 0.082 0 22 hPsi_associated_SNPs_3885 0 0 0 0 2 nucleus 0.43866557165994 0.433828323659895 0 0 hPsi_site_9302 iPseU_CNN:0;iRNA_PseU:0 9303 chr3 3886893 3886893 1 + A G UCEC 3886892 + 3886872 3886912 41 GATAGTCGCTGGTTTGATTCTACACCCAACCTGGAAATTCT GATAGTCGCTGGTTTGATTCTGCACCCAACCTGGAAATTCT < 41bp 0.872085279431834 0.520952612853363 0.44759923 0.23618448 prediction 0.702265333156942 Functional Loss - LRRN1 ENSG00000175928 CDS Human protein_coding chr3:3886892 chr3:3886893 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_3886 0 0 0 0 0 Cytosol 0.43871136020814 0.438718329312503 0 0 hPsi_site_9303 iPseU_CNN:0;iRNA_PseU:0 9304 chr5 140864817 140864817 1 + A G KIRP 140864816 + 140864796 140864836 41 TCCTCTTTTACCACCTGGGTTACGTTTGTGGGCAGATCCGC TCCTCTTTTACCACCTGGGTTGCGTTTGTGGGCAGATCCGC < 41bp 0.851131703021599 0.478253543232704 0.8125708 0.49618632 prediction 0.702263406043197 Functional Loss - PCDHGC4 ENSG00000242419 CDS Human protein_coding chr5:140864816 chr5:140864817 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_3887 0 0 0 0 0 exosome 0.438718577499369 0.438718593009555 0.6251416 0 hPsi_site_9304 iPseU_CNN:0.6251416;iRNA_PseU:0 9305 chr1 197890781 197890781 1 + A G CESC 197890780 + 197890760 197890800 41 TGGGAGTGGACATCGTCAATTACAACTCAGGTGTGCCTCCT TGGGAGTGGACATCGTCAATTGCAACTCAGGTGTGCCTCCT < 41bp 0.851100978797145 0.466570958165769 0.78610826 0.385332 prediction 0.70220195759429 Functional Loss - LHX9 ENSG00000143355 CDS Human protein_coding chr1:197890780 chr1:197890781 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_3888 0 0 0 0 1 exosome 0.438705518429295 0.438719275405641 0.57221652 0 hPsi_site_9305 iPseU_CNN:0.57221652;iRNA_PseU:0 9306 chr1 166962028 166962028 1 + A G UCEC 166962027 + 166962007 166962047 41 GTGAAATTGGCTGTGTTAAGTATTCTCTCCAAGAAGGTATT GTGAAATTGGCTGTGTTAAGTGTTCTCTCCAAGAAGGTATT < 41bp 0.875014530812788 0.523948209826978 0.44840688 0.28604996 prediction 0.702132641971621 Functional Loss - MAEL ENSG00000143194 CDS Human protein_coding chr1:166962027 chr1:166962028 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3889 0 0 0 1 1 exosome 0.438719247695739 0.43871882882542 0 0 hPsi_site_9306 iPseU_CNN:0;iRNA_PseU:0 9307 chr1 248059264 248059264 1 + A G LGG 248059263 + 248059243 248059283 41 GCCTATGACCGGTGTGTGGCTATCTGCAAGCCCCTGCACTA GCCTATGACCGGTGTGTGGCTGTCTGCAAGCCCCTGCACTA < 41bp 0.881626976096188 0.530563614059568 0.7586988 0.34264404 prediction 0.702126724073241 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059263 chr1:248059264 nonsynonymous SNV 0.185 0 22 hPsi_associated_SNPs_3890 0 0 1 0 0 exosome 0.438718593592043 0.438718593067679 0.5173976 0 hPsi_site_9307 iPseU_CNN:0.5173976;iRNA_PseU:0 9308 chr17 40996708 40996708 1 + A G rs34435306 40996707 + 40996687 40996727 41 TTACCATCTTTGCCCTGGCCTATGTTTTGCTGACCAGCCCA TTACCATCTTTGCCCTGGCCTGTGTTTTGCTGACCAGCCCA < 41bp 0.85105973419947 0.483341030824408 0.3363337 0.31905383 prediction 0.70211946839894 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40996707 chr17:40996708 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_3891 0 0 1 0 0 exosome 0.438718592994138 0.438718592993511 0 0 hPsi_site_9308 iPseU_CNN:0;iRNA_PseU:0 9309 chr17 7344888 7344888 1 + A G UCEC 7344887 + 7344867 7344907 41 ATCCAGGGCACCCCAGAGGATACCAGCTCCTTCAGTGAGAG ATCCAGGGCACCCCAGAGGATGCCAGCTCCTTCAGTGAGAG < 41bp 0.890126575287827 0.539103218883061 0.2561127 0.17618427 prediction 0.702046712809532 Functional Loss - FGF11 ENSG00000161958 CDS Human protein_coding chr17:7344887 chr17:7344888 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3892 0 0 0 2 2 exosome 0.438738138246714 0.438740877438511 0 0 hPsi_site_9309 iPseU_CNN:0;iRNA_PseU:0 9310 chr22 27026330 27026330 1 + A G UCEC 27026329 + 27026309 27026349 41 TTTGCTCCCAGTTTCCGGGCTACCGAGGATTTCAGTATGTG TTTGCTCCCAGTTTCCGGGCTGCCGAGGATTTCAGTATGTG < 41bp 0.882371647658133 0.531349162050494 0.5892252 0.27927175 prediction 0.702044971215278 Functional Loss - CRYBA4 ENSG00000196431 CDS Human protein_coding chr22:27026329 chr22:27026330 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3893 0 0 0 0 1 Cytosol 0.438718616556283 0.438718592988195 0.1784504 0 hPsi_site_9310 iPseU_CNN:0.1784504;iRNA_PseU:0 9311 chr16 84778566 84778566 1 + A G UCEC 84778565 + 84778545 84778585 41 AAAAGCGGCCACCTGGATATTACAGCTATTTGAAAGATGGT AAAAGCGGCCACCTGGATATTGCAGCTATTTGAAAGATGGT < 41bp 0.85097448875263 0.454532605030609 0.26854572 0.22534606 prediction 0.701948977505261 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778565 chr16:84778566 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_3894 0 0 1 0 0 Cytosol 0.438718593323046 0.438718593005157 0 0 hPsi_site_9311 iPseU_CNN:0;iRNA_PseU:0 9312 chr14 35739633 35739633 1 + A G LUAD 35739632 + 35739612 35739652 41 AGGATGATCCATTCCTTCTGTATGCCACACTGCACTCCGGG AGGATGATCCATTCCTTCTGTGTGCCACACTGCACTCCGGG < 41bp 0.850963913164357 0.453583315038959 0.6359013 0.42971352 prediction 0.701927826328714 Functional Loss - KIAA0391 ENSG00000100890;ENSG00000258790 CDS Human other chr14:35739632 chr14:35739633 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3895 0 0 1 0 1 Endoplasmic reticulum 0.438736219950638 0.43877347363328 0.2718026 0 hPsi_site_9312 iPseU_CNN:0.2718026;iRNA_PseU:0 9313 chr3 46449581 46449581 1 + A G rs11574443 46449580 + 46449560 46449600 41 GCAGTCTGAAGATGGCCAATTACACGCTGGCACCAGAGGAT GCAGTCTGAAGATGGCCAATTGCACGCTGGCACCAGAGGAT < 41bp 0.877537152130908 0.526594466827581 0.5022867 0.21893376 prediction 0.701885370606653 Functional Loss - CCRL2 ENSG00000121797 CDS Human protein_coding chr3:46449580 chr3:46449581 nonsynonymous SNV 0.068 1 22 hPsi_associated_SNPs_3896 0 0 0 0 1 exosome 0.430282898827979 0.436849705896983 0.00457339999999995 0 hPsi_site_9313 iPseU_CNN:0.00457339999999995;iRNA_PseU:0 9314 chr3 52246358 52246358 1 + A G STAD 52246357 + 52246337 52246377 41 GTGCAAGCAATCAATTACCCTACGGTGCCCCGGGGAGAAGA GTGCAAGCAATCAATTACCCTGCGGTGCCCCGGGGAGAAGA < 41bp 0.850925484585134 0.452165945878528 0.3020903 0.22185951 prediction 0.701850969170268 Functional Loss - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52246357 chr3:52246358 nonsynonymous SNV 0.564 5 22 hPsi_associated_SNPs_3897 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0 0 hPsi_site_9314 iPseU_CNN:0;iRNA_PseU:0 9315 chr17 9792728 9792728 1 + A G rs549558422 9792727 + 9792707 9792747 41 ATACTGGGTCCGCTTCTTGCTAGCCCGCCACTCAGGCTGCA ATACTGGGTCCGCTTCTTGCTGGCCCGCCACTCAGGCTGCA < 41bp 0.888141509611733 0.537241869493319 0.60498196 0.22413597 prediction 0.701799280236828 Functional Loss - GLP2R ENSG00000065325 CDS Human protein_coding chr17:9792727 chr17:9792728 synonymous SNV . 0 22 hPsi_associated_SNPs_3898 0 0 0 0 1 nucleus 0.438718565725611 0.438719310828338 0.20996392 0 hPsi_site_9315 iPseU_CNN:0.20996392;iRNA_PseU:0 9316 chr9 32634533 32634533 1 + T C BLCA 32634534 - 32634514 32634554 41 CAATCAACTGGAGATGTAGATAAAGTGACAGATACCAAACC CAATCAACTGGAGATGTAGATGAAGTGACAGATACCAAACC < 41bp 0.87245200118638 0.521562893042864 0.39280447 0.3067394 prediction 0.701778216287033 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634534 chr9:32634533 nonsynonymous SNV 0.884 1 22 hPsi_associated_SNPs_3899 0 0 0 0 0 exosome 0.439117038186399 0.439250598359516 0 0 hPsi_site_9316 iPseU_CNN:0;iRNA_PseU:0 9317 chr17 4391153 4391153 1 + A G rs333122 4391152 + 4391132 4391172 41 CGACCTGGAGAGACAAGGCCTACTTTCGGGCGCTGGCGCCT CGACCTGGAGAGACAAGGCCTGCTTTCGGGCGCTGGCGCCT < 41bp 0.850862250587429 0.463046863273107 0.72327006 0.5825127 prediction 0.701724501174858 Functional Loss - SPNS3 ENSG00000182557 CDS Human protein_coding chr17:4391152 chr17:4391153 synonymous SNV . 0 22 hPsi_associated_SNPs_3900 0 0 0 0 1 exosome 0.438742621372365 0.438719099827986 0.28151472 0 hPsi_site_9317 iPseU_CNN:0.28151472;iRNA_PseU:0 9318 chr15 41657726 41657726 1 + A G KIRP 41657725 + 41657705 41657745 41 TGTGGCCCTGCAAGTCAGAGTACCTTGGGTCTGAAGGGGTC TGTGGCCCTGCAAGTCAGAGTGCCTTGGGTCTGAAGGGGTC < 41bp 0.850856463718793 0.453887152666231 0.5714198 0.26532882 prediction 0.701712927437585 Functional Loss - NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41657725 chr15:41657726 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_3901 0 0 1 0 1 Nucleus 0.438718583766046 0.438718592990886 0.1428396 0 hPsi_site_9318 iPseU_CNN:0.1428396;iRNA_PseU:0 9319 chr3 100467349 100467349 1 + A G UCEC 100467348 + 100467328 100467368 41 CCTCCCTTTGGTCAGGGCTATACCCAACCTGGACCTGGTTA CCTCCCTTTGGTCAGGGCTATGCCCAACCTGGACCTGGTTA < 41bp 0.850855679520585 0.468554951403699 0.91051066 0.29443514 prediction 0.701711359041169 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100467348 chr3:100467349 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_3902 0 0 1 0 0 Cytosol 0.438718593257207 0.438718592977233 0.82102132 0 hPsi_site_9319 iPseU_CNN:0.82102132;iRNA_PseU:0 9320 chr9 114411991 114411991 1 + A G LUSC 114411990 + 114411970 114412010 41 GATCTTCTCCTGTTTCAAATTATCTTAGCTCCTTTTCACCT GATCTTCTCCTGTTTCAAATTGTCTTAGCTCCTTTTCACCT < 41bp 0.850851310188471 0.469540391342793 0.6626719 0.33881927 prediction 0.701702620376943 Functional Loss - DNAJC25 ENSG00000059769 CDS Human protein_coding chr9:114411990 chr9:114411991 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_3903 0 0 1 0 0 nucleolus 0.438718593299404 0.438718607989201 0.3253438 0 hPsi_site_9320 iPseU_CNN:0.3253438;iRNA_PseU:0 9321 chr11 64006086 64006086 1 + A G rs61761278 64006085 + 64006065 64006105 41 AGGCAGCAAGAGGGGTCACATACCAGCTCAGGGGAGAATGG AGGCAGCAAGAGGGGTCACATGCCAGCTCAGGGGAGAATGG < 41bp 0.850816617833407 0.498056543302997 0.19738108 0.1868546 prediction 0.701633235666815 Functional Loss - VEGFB ENSG00000173511 UTR3 Human protein_coding chr11:64006085 chr11:64006086 . . 0 22 hPsi_associated_SNPs_3904 0 0 1 3 0 Ribosome 0.43984209707893 0.438887303955138 0 0 hPsi_site_9321 iPseU_CNN:0;iRNA_PseU:0 9322 chr3 38043035 38043035 1 + A G STAD 38043034 + 38043014 38043054 41 GCAACTGCTACCTTGTGCTCTACACATACCAGAGGCTGGGC GCAACTGCTACCTTGTGCTCTGCACATACCAGAGGCTGGGC < 41bp 0.85081458388015 0.442402870066641 0.74437344 0.28036475 prediction 0.701629167760301 Functional Loss - VILL ENSG00000136059 CDS Human protein_coding chr3:38043034 chr3:38043035 nonsynonymous SNV 0.931 4 22 hPsi_associated_SNPs_3905 0 0 1 0 2 chromatin 0.438836087695789 0.438714480135281 0.48874688 0 hPsi_site_9322 iPseU_CNN:0.48874688;iRNA_PseU:0 9323 chr19 17338002 17338002 1 + A G rs141888879 17338001 + 17337981 17338021 41 GGCCCCACCCAGTGCCCGACTATGAGCTGTGAGTGTCCCCC GGCCCCACCCAGTGCCCGACTGTGAGCTGTGAGTGTCCCCC < 41bp 0.85079442024322 0.471104284625776 0.34960413 0.1850853 prediction 0.70158884048644 Functional Loss - OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17338001 chr19:17338002 nonsynonymous SNV 0.923 4 22 hPsi_associated_SNPs_3906 0 0 1 0 1 membrane 0.438792052997759 0.438704099244312 0 0 hPsi_site_9323 iPseU_CNN:0;iRNA_PseU:0 9324 chr6 123130252 123130252 1 + A G LUSC 123130251 + 123130231 123130271 41 TGCAGGATATGTTGCAGTATTACTTGAATCTGACAGAGGCG TGCAGGATATGTTGCAGTATTGCTTGAATCTGACAGAGGCG < 41bp 0.86825063757224 0.5175078286156 0.3338707 0.22925466 prediction 0.701485617913281 Functional Loss - SMPDL3A ENSG00000172594 CDS Human protein_coding chr6:123130251 chr6:123130252 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_3907 0 0 1 0 1 Ribosome 0.441804024279987 0.435599909690069 0 0 hPsi_site_9324 iPseU_CNN:0;iRNA_PseU:0 9325 chr19 30505829 30505829 1 + A G rs146454221 30505828 + 30505808 30505848 41 TGTTATAGAAAAAGAATTTGTATCACCTTCCTTAACACCAC TGTTATAGAAAAAGAATTTGTGTCACCTTCCTTAACACCAC < 41bp 0.874291245707373 0.523570366599563 0.5312412 0.3297639 prediction 0.70144175821562 Functional Loss - URI1 ENSG00000105176 CDS Human protein_coding chr19:30505828 chr19:30505829 synonymous SNV . 0 22 hPsi_associated_SNPs_3908 0 0 1 0 1 Cytosol 0.438686253799439 0.434431900770364 0.0624823999999999 0 hPsi_site_9325 iPseU_CNN:0.0624823999999999;iRNA_PseU:0 9326 chr4 71275446 71275446 1 + A G SKCM 71275445 + 71275425 71275465 41 TTCCTTTTTTTCTTGCTATTTACCTTCCTATCTCTAACCCT TTCCTTTTTTTCTTGCTATTTGCCTTCCTATCTCTAACCCT < 41bp 0.864438954980401 0.51372279464109 0.5964817 0.21236601 prediction 0.701432320678623 Functional Loss - OPRPN ENSG00000171199 CDS Human protein_coding chr4:71275445 chr4:71275446 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_3909 0 0 0 0 0 exosome 0.43871857973449 0.43871795005042 0.1929634 0 hPsi_site_9326 iPseU_CNN:0.1929634;iRNA_PseU:0 9327 chr6 116833152 116833152 1 + A G UCEC 116833151 + 116833131 116833171 41 GCCACAGCTGCCGTTTCTTCTACGTCCTCGGCCAGATCACT GCCACAGCTGCCGTTTCTTCTGCGTCCTCGGCCAGATCACT < 41bp 0.850692069461176 0.453771017197998 0.364043 0.2886187 prediction 0.701384138922352 Functional Loss - FAM26E ENSG00000178033 CDS Human protein_coding chr6:116833151 chr6:116833152 nonsynonymous SNV 0.678 0 22 hPsi_associated_SNPs_3910 0 0 1 0 0 exosome 0.440603362203786 0.438751909993891 0 0 hPsi_site_9327 iPseU_CNN:0;iRNA_PseU:0 9328 chrX 2573148 2573148 1 + A G rs60860863 2573147 + 2573127 2573167 41 ACAGAAGCCTAAACAGCCCTTACATTCATTGCCTTTGGACC ACAGAAGCCTAAACAGCCCTTGCATTCATTGCCTTTGGACC < 41bp 0.873576109765301 0.522908376477051 0.81729054 0.39930475 prediction 0.7013354665765 Functional Loss - CD99P1 ENSG00000223773 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:2573147 chrX:2573148 . . 0 22 hPsi_associated_SNPs_3911 0 0 0 0 1 unknown 0.438683106446626 0.43871677659545 0.63458108 0 hPsi_site_9328 iPseU_CNN:0.63458108;iRNA_PseU:0 9329 chr9 12695683 12695683 1 + A G UCEC 12695682 + 12695662 12695702 41 AATTTGAGAACATTTCCATTTATAACTACTTTGTTTGGACA AATTTGAGAACATTTCCATTTGTAACTACTTTGTTTGGACA < 41bp 0.87193996860184 0.52128601033518 0.30798405 0.29107442 prediction 0.701307916533319 Functional Loss - TYRP1 ENSG00000107165 CDS Human protein_coding chr9:12695682 chr9:12695683 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3912 0 0 0 0 0 exosome 0.440605426209937 0.435494657604012 0 0 hPsi_site_9329 iPseU_CNN:0;iRNA_PseU:0 9330 chr13 41656885 41656885 1 + A G BRCA 41656884 + 41656864 41656904 41 AAGCACTGAAAATGAGTATGTATCAACTTCAGAAGCTGATG AAGCACTGAAAATGAGTATGTGTCAACTTCAGAAGCTGATG < 41bp 0.87274014792579 0.522099761595731 0.306071 0.21936983 prediction 0.701280772660117 Functional Loss - WBP4 ENSG00000120688 CDS Human protein_coding chr13:41656884 chr13:41656885 synonymous SNV . 0 22 hPsi_associated_SNPs_3913 0 0 0 0 1 Cytosol 0.438307458328534 0.435108977811685 0 0 hPsi_site_9330 iPseU_CNN:0;iRNA_PseU:0 9331 chr8 11412309 11412309 1 + A G SKCM 11412308 + 11412288 11412328 41 AGGGGGAGCTGATCAAGCACTATAAGATCCGCTGCCTGGAT AGGGGGAGCTGATCAAGCACTGTAAGATCCGCTGCCTGGAT < 41bp 0.890284339241522 0.539665288298362 0.63306636 0.5791886 prediction 0.701238101886321 Functional Loss - BLK ENSG00000136573 CDS Human protein_coding chr8:11412308 chr8:11412309 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3914 0 0 0 0 2 exosome 0.438719013033215 0.438718607115515 0.10775552 0 hPsi_site_9331 iPseU_CNN:0.10775552;iRNA_PseU:0 9332 chr7 7613322 7613322 1 + A G PRAD 7613321 + 7613301 7613341 41 TTATCAAGGTATGGACTTGATACAGAGCAGGTGTGGAGGAA TTATCAAGGTATGGACTTGATGCAGAGCAGGTGTGGAGGAA < 41bp 0.850610187213123 0.471826806729843 0.38207093 0.29110736 prediction 0.701220374426245 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7613321 chr7:7613322 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3915 0 0 1 0 0 Nucleus 0.438718454476896 0.43871859253214 0 0 hPsi_site_9332 iPseU_CNN:0;iRNA_PseU:0 9333 chr5 175798782 175798782 1 + A G LUSC 175798781 + 175798761 175798801 41 CGGGAGCTGGGTCTACAGGCTATCGATAACCAGCGGGAGGT CGGGAGCTGGGTCTACAGGCTGTCGATAACCAGCGGGAGGT < 41bp 0.883069501490955 0.532465730480206 0.5827957 0.29750305 prediction 0.701207542021498 Functional Loss - ARL10 ENSG00000175414 CDS Human protein_coding chr5:175798781 chr5:175798782 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3916 0 0 1 0 1 cytosol 0.438718404997848 0.438717733273159 0.1655914 0 hPsi_site_9333 iPseU_CNN:0.1655914;iRNA_PseU:0 9334 chr19 47424157 47424157 1 + A G OV 47424156 + 47424136 47424176 41 CTGCTTCTGCTGGCATTGGTTACGGACGCAACATTAATGAA CTGCTTCTGCTGGCATTGGTTGCGGACGCAACATTAATGAA < 41bp 0.850602857017849 0.47444848063175 0.9221092 0.23546413 prediction 0.701205714035698 Functional Loss - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47424156 chr19:47424157 nonsynonymous SNV 0.963 4 22 hPsi_associated_SNPs_3917 0 0 1 0 0 Ribosome 0.433077889356888 0.437831244638276 0.8442184 0 hPsi_site_9334 iPseU_CNN:0.8442184;iRNA_PseU:0 9335 chr13 103514012 103514012 1 + A G LUSC 103514011 + 103513991 103514031 41 AGGGGGCTTTCTGAAGGAGGTAGAGTCAAGGAGAGTGGTCT AGGGGGCTTTCTGAAGGAGGTGGAGTCAAGGAGAGTGGTCT < 41bp 0.885769144877672 0.535178778761917 0.73322105 0.35727483 prediction 0.701180732231511 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514011 chr13:103514012 synonymous SNV . 0 22 hPsi_associated_SNPs_3918 0 0 1 0 1 unknown 0.438718438529928 0.438718592852719 0.4664421 0 hPsi_site_9335 iPseU_CNN:0.4664421;iRNA_PseU:0 9336 chr5 125967454 125967454 1 + A G UCEC 125967453 + 125967433 125967473 41 TCAGGGAAAGATACTTGTCCTACTTTGCCTAAACTCACTAA TCAGGGAAAGATACTTGTCCTGCTTTGCCTAAACTCACTAA < 41bp 0.858391813977039 0.507861127897853 0.6236323 0.33972043 prediction 0.701061372158374 Functional Loss - TEX43 ENSG00000196900 CDS Human protein_coding chr5:125967453 chr5:125967454 nonsynonymous SNV 0.274 0 22 hPsi_associated_SNPs_3919 0 0 0 0 1 unknown 0.438718592938183 0.438718592998228 0.2472646 0 hPsi_site_9336 iPseU_CNN:0.2472646;iRNA_PseU:0 9337 chr17 47895315 47895315 1 + A G KIRC 47895314 + 47895294 47895334 41 ATGCACGGCTGGGACGTCTCTATATGTGTGAATTCTGTTTA ATGCACGGCTGGGACGTCTCTGTATGTGTGAATTCTGTTTA < 41bp 0.850512396708244 0.463440999600955 0.34918725 0.23470512 prediction 0.701024793416488 Functional Loss - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47895314 chr17:47895315 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3920 0 0 0 0 1 Cytosol 0.43421727245987 0.438737927823417 0 0 hPsi_site_9337 iPseU_CNN:0;iRNA_PseU:0 9338 chr20 29623203 29623203 1 + A G PRAD 29623202 + 29623182 29623222 41 GAAATGGATGAGGGAACCTATATACATGCACTCGACAATGG GAAATGGATGAGGGAACCTATGTACATGCACTCGACAATGG < 41bp 0.878271869842036 0.527764884694583 0.7059336 0.67028046 prediction 0.701013970294907 Functional Loss - FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29623202 chr20:29623203 nonsynonymous SNV 0.775 0 22 hPsi_associated_SNPs_3921 0 0 0 0 2 unknown 0.438718854496606 0.438718737533881 0.0713062800000002 0 hPsi_site_9338 iPseU_CNN:0.0713062800000002;iRNA_PseU:0 9339 chr1 201926470 201926470 1 + A G UCEC 201926469 + 201926449 201926489 41 ATGGGTACCATTGGTGGTGGTATCTTTCAAGCAATCAAAGG ATGGGTACCATTGGTGGTGGTGTCTTTCAAGCAATCAAAGG < 41bp 0.877819362830236 0.527322330895638 0.2849849 0.15545267 prediction 0.700994063869197 Functional Loss - TIMM17A ENSG00000134375 CDS Human protein_coding chr1:201926469 chr1:201926470 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3922 0 0 1 0 2 Endoplasmic reticulum 0.439821636319742 0.439736744411684 0 0 hPsi_site_9339 iPseU_CNN:0;iRNA_PseU:0 9340 chr5 179247937 179247937 1 + A G LUSC 179247936 + 179247916 179247956 41 TCCGCCAGCTCGCCGCTCGCTATGGCGTCGCTCACCGTGAA TCCGCCAGCTCGCCGCTCGCTGTGGCGTCGCTCACCGTGAA < 41bp 0.859506167567766 0.509012444614792 0.9529556 0.8712851 prediction 0.700987445905949 Functional Loss - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179247936 chr5:179247937 nonsynonymous SNV 0.127 1 22 hPsi_associated_SNPs_3923 0 0 1 0 0 Ribosome 0.438807744123846 0.439483171885709 0.163341 0 hPsi_site_9340 iPseU_CNN:0.163341;iRNA_PseU:0 9341 chr14 23312625 23312625 1 + A G STAD 23312624 + 23312604 23312644 41 GCCGGGGCATCCAGCAACTTTATGGCGAGTAGTCTACACCC GCCGGGGCATCCAGCAACTTTGTGGCGAGTAGTCTACACCC < 41bp 0.887062956366583 0.536571394764198 0.42423356 0.41040128 prediction 0.700983123204769 Functional Loss - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23312624 chr14:23312625 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_3924 0 0 0 0 0 cytosol 0.438718415209568 0.438718012198304 0 0 hPsi_site_9341 iPseU_CNN:0;iRNA_PseU:0 9342 chr6 12292703 12292703 1 + A G SKCM 12292702 + 12292682 12292722 41 TGATGGATAAAGAGTGTGTCTACTTCTGCCACCTGGACATC TGATGGATAAAGAGTGTGTCTGCTTCTGCCACCTGGACATC < 41bp 0.850475796640927 0.449524701026106 0.45653722 0.22903544 prediction 0.700951593281855 Functional Loss - EDN1 ENSG00000078401 CDS Human protein_coding chr6:12292702 chr6:12292703 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_3925 0 0 0 0 1 exosome 0.43875883769399 0.438711403742749 0 0 hPsi_site_9342 iPseU_CNN:0;iRNA_PseU:0 9343 chr17 56232873 56232873 1 + A G rs149555930 56232872 + 56232852 56232892 41 TTTTTCTCTCAGTCATGGCCTATGACCGCTACATAGCCATC TTTTTCTCTCAGTCATGGCCTGTGACCGCTACATAGCCATC < 41bp 0.850466921337303 0.469655210093046 0.57988816 0.21090871 prediction 0.700933842674605 Functional Loss - OR4D1 ENSG00000141194 CDS Human protein_coding chr17:56232872 chr17:56232873 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3926 0 0 0 0 0 unknown 0.438718589585941 0.438718618789599 0.15977632 0 hPsi_site_9343 iPseU_CNN:0.15977632;iRNA_PseU:0 9344 chr2 200828565 200828565 1 + A G rs199836821 200828564 + 200828544 200828584 41 AAAAATCAGCTTATGGACTTTAGCAGTTGCTGTGAAAAACT AAAAATCAGCTTATGGACTTTGGCAGTTGCTGTGAAAAACT < 41bp 0.850450826431651 0.494072138527546 0.30606657 0.19773963 prediction 0.700901652863303 Functional Loss - MAIP1 ENSG00000162972 UTR3 Human protein_coding chr2:200828564 chr2:200828565 . . 0 22 hPsi_associated_SNPs_3927 0 0 1 2 0 unknown 0.438717611384015 0.438715522778135 0 0 hPsi_site_9344 iPseU_CNN:0;iRNA_PseU:0 9345 chr11 57983110 57983110 1 + A G rs142162144 57983109 + 57983089 57983129 41 CACTGTGGTGACACCCATGATAAACCCCTTCATCTACAGCT CACTGTGGTGACACCCATGATGAACCCCTTCATCTACAGCT < 41bp 0.850436157838932 0.487623547807642 0.6815975 0.38667187 prediction 0.700872315677864 Functional Loss - OR1S1 ENSG00000172774 CDS Human other chr11:57983109 chr11:57983110 nonsynonymous SNV 0.916 0 22 hPsi_associated_SNPs_3928 0 0 0 0 0 unknown 0.43829879673742 0.438649755749567 0.363195 0 hPsi_site_9345 iPseU_CNN:0.363195;iRNA_PseU:0 Cohen syndrome Cohen syndrome 9346 chr1 201983128 201983128 1 + A G LUSC 201983127 + 201983107 201983147 41 AAAAGAACAGCAACATGACCTACGAGAAGCTGAGCCGGGCC AAAAGAACAGCAACATGACCTGCGAGAAGCTGAGCCGGGCC < 41bp 0.850432210617822 0.458543507998034 0.7418895 0.3761683 prediction 0.700864421235645 Functional Loss - ELF3 ENSG00000163435 CDS Human protein_coding chr1:201983127 chr1:201983128 nonsynonymous SNV 0.971 4 22 hPsi_associated_SNPs_3929 0 0 0 0 1 Endoplasmic reticulum 0.43868731258925 0.438713428991001 0.483779 0 hPsi_site_9346 iPseU_CNN:0.483779;iRNA_PseU:0 9347 chrX 71401593 71401593 1 + A G BLCA 71401592 + 71401572 71401612 41 GGGGCTTCTAAAGGGGCTTGTACGGCAACTGGAGCGGTTCA GGGGCTTCTAAAGGGGCTTGTGCGGCAACTGGAGCGGTTCA < 41bp 0.850426443517699 0.476706562451859 0.58881694 0.26759094 prediction 0.700852887035399 Functional Loss - PIN4 ENSG00000102309 CDS Human protein_coding chrX:71401592 chrX:71401593 synonymous SNV . 0 22 hPsi_associated_SNPs_3930 0 0 0 0 1 Ribosome 0.438718590554908 0.438718592990796 0.17763388 0 hPsi_site_9347 iPseU_CNN:0.17763388;iRNA_PseU:0 9348 chr8 22034151 22034151 1 + A G KIRC 22034150 + 22034130 22034170 41 ACAGCTATATTGTGTTCACCTATCGACCTTGCGGGTGAGCA ACAGCTATATTGTGTTCACCTGTCGACCTTGCGGGTGAGCA < 41bp 0.850367379373024 0.472837830458773 0.5940959 0.42404038 prediction 0.700734758746048 Functional Loss - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22034150 chr8:22034151 nonsynonymous SNV 0.972 2 22 hPsi_associated_SNPs_3931 0 0 1 0 1 Endoplasmic reticulum 0.43871993624194 0.438718178760877 0.1881918 0 hPsi_site_9348 iPseU_CNN:0.1881918;iRNA_PseU:0 9349 chr6 144167249 144167249 1 + A G BLCA 144167248 + 144167228 144167268 41 GAGTGTTCTTTGATGACGACTATGACTACCTGCAGCACCTG GAGTGTTCTTTGATGACGACTGTGACTACCTGCAGCACCTG < 41bp 0.866598407323226 0.516260514250479 0.4134559 0.30740637 prediction 0.700675786145493 Functional Loss - LTV1 ENSG00000135521 CDS Human protein_coding chr6:144167248 chr6:144167249 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_3932 0 0 1 0 1 Ribosome 0.438788837030065 0.438806704399502 0 0 hPsi_site_9349 iPseU_CNN:0;iRNA_PseU:0 9350 chr17 40847716 40847716 1 + A G KIRC 40847715 + 40847695 40847735 41 CTGGCTACCATGGCCCCGGGTACCGCCTGCCCGACTACCCC CTGGCTACCATGGCCCCGGGTGCCGCCTGCCCGACTACCCC < 41bp 0.892016296603303 0.541686465968612 0.3885866 0.17017388 prediction 0.700659661269383 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40847715 chr17:40847716 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_3933 0 0 1 0 0 Cytosol 0.438956462553748 0.438732745476443 0 0 hPsi_site_9350 iPseU_CNN:0;iRNA_PseU:0 9351 chr12 6884606 6884606 1 + A G OV 6884605 + 6884585 6884625 41 ACTGGAGACAATGGCGACTTTACCCTTCGACTAGAGGATGT ACTGGAGACAATGGCGACTTTGCCCTTCGACTAGAGGATGT < 41bp 0.850306453502871 0.454611202132303 0.30531514 0.24047357 prediction 0.700612907005742 Functional Loss - LAG3 ENSG00000089692 CDS Human protein_coding chr12:6884605 chr12:6884606 nonsynonymous SNV 0.952 0 22 hPsi_associated_SNPs_3934 0 0 0 0 0 exosome 0.438690572373945 0.438680585692707 0 0 hPsi_site_9351 iPseU_CNN:0;iRNA_PseU:0 9352 chr1 35250835 35250835 1 + A G UCS 35250834 + 35250814 35250854 41 ACTCTCTGGCATGGCTTCAATATGCCGCGCCTGGTGCAGTG ACTCTCTGGCATGGCTTCAATGTGCCGCGCCTGGTGCAGTG < 41bp 0.850267845023964 0.456010862358814 0.6171123 0.31454363 prediction 0.700535690047928 Functional Loss - GJB3 ENSG00000188910 CDS Human protein_coding chr1:35250834 chr1:35250835 nonsynonymous SNV 0.390 2 22 hPsi_associated_SNPs_3935 0 0 0 0 0 Ribosome 0.438724132702162 0.438883635061463 0.2342246 0 hPsi_site_9352 iPseU_CNN:0.2342246;iRNA_PseU:0 9353 chr4 6303738 6303738 1 + A G READ 6303737 + 6303717 6303757 41 GCTGCCTCTACGGCGAGGCCTACCCTGCCTGCAGCCCTGGC GCTGCCTCTACGGCGAGGCCTGCCCTGCCTGCAGCCCTGGC < 41bp 0.883321066548734 0.533067492764848 0.58035743 0.2865934 prediction 0.700507147567774 Functional Loss - WFS1 ENSG00000109501 CDS Human protein_coding chr4:6303737 chr4:6303738 nonsynonymous SNV 0.966 5 22 hPsi_associated_SNPs_3936 0 0 1 0 0 nucleus 0.438690651809623 0.438718597632357 0.16071486 0 hPsi_site_9353 iPseU_CNN:0.16071486;iRNA_PseU:0 9354 chr7 115889220 115889220 1 + A G BLCA 115889219 + 115889199 115889239 41 AGTCAGATGGAATTCCCATGTATAAACGCAATGTTATGATA AGTCAGATGGAATTCCCATGTGTAAACGCAATGTTATGATA < 41bp 0.875574856679507 0.525388719878441 0.37981004 0.2862491 prediction 0.700372273602132 Functional Loss - TES ENSG00000135269 CDS Human protein_coding chr7:115889219 chr7:115889220 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3937 0 0 1 0 0 Cytosol 0.438718581773103 0.43871857480497 0 0 hPsi_site_9354 iPseU_CNN:0;iRNA_PseU:0 9355 chrX 78011160 78011160 1 + A G SKCM 78011159 + 78011139 78011179 41 TTGTGGTATGCTTTGTACCCTACAACTCTGTCCTCTTCTTG TTGTGGTATGCTTTGTACCCTGCAACTCTGTCCTCTTCTTG < 41bp 0.850092517493431 0.475026196805662 0.70946527 0.31076393 prediction 0.700185034986861 Functional Loss - LPAR4 ENSG00000147145 CDS Human protein_coding chrX:78011159 chrX:78011160 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_3938 0 0 0 0 0 exosome 0.438718593370695 0.438718593024949 0.41893054 0 hPsi_site_9355 iPseU_CNN:0.41893054;iRNA_PseU:0 9356 chr14 55529810 55529810 1 + A G STAD 55529809 + 55529789 55529829 41 GGAGGGCAGTATCCTACCCCTAATATGCCATATCCATCTCC GGAGGGCAGTATCCTACCCCTGATATGCCATATCCATCTCC < 41bp 0.850079161534078 0.466144060550922 0.28931785 0.24636313 prediction 0.700158323068156 Functional Loss - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529809 chr14:55529810 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3939 0 0 1 0 0 Ribosome 0.438717778408602 0.438718597568446 0 0 hPsi_site_9356 iPseU_CNN:0;iRNA_PseU:0 9357 chr7 39610202 39610202 1 + A G UCEC 39610201 + 39610181 39610221 41 GTGCAGAAGTCATTTTAAACTATGGACGACTCCGAGGAACA GTGCAGAAGTCATTTTAAACTGTGGACGACTCCGAGGAACA < 41bp 0.874952695523138 0.524982051875035 0.5102171 0.24524713 prediction 0.699941287296207 Functional Loss - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39610201 chr7:39610202 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3940 0 0 1 0 2 Ribosome 0.43871859299582 0.438718592996683 0.0204342 0 hPsi_site_9357 iPseU_CNN:0.0204342;iRNA_PseU:0 9358 chr11 118405743 118405743 1 + A G rs149114234 118405742 + 118405722 118405762 41 GATTTTCCTCCTTCCTATGCTATGTAGCCTTGTTCCCTCAG GATTTTCCTCCTTCCTATGCTGTGTAGCCTTGTTCCCTCAG < 41bp 0.849957917455391 0.490325692381387 0.34300065 0.32952696 prediction 0.699915834910783 Functional Loss - TMEM25 ENSG00000149582 UTR3 Human protein_coding chr11:118405742 chr11:118405743 . . 0 22 hPsi_associated_SNPs_3941 0 0 0 2 0 Nucleus 0.438727650132946 0.438840951971542 0 0 hPsi_site_9358 iPseU_CNN:0;iRNA_PseU:0 9359 chr15 50494779 50494779 1 + A G rs144192537 50494778 + 50494758 50494798 41 AAGGCAGATGATGTCATCTATATCACTCTGCCCTTTTACCA AAGGCAGATGATGTCATCTATGTCACTCTGCCCTTTTACCA < 41bp 0.849946762084275 0.458292382380331 0.39655322 0.28363734 prediction 0.699893524168551 Functional Loss - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50494778 chr15:50494779 nonsynonymous SNV 0.904 0 22 hPsi_associated_SNPs_3942 0 0 1 0 2 Ribosome 0.43853980064586 0.438334508911205 0 0 hPsi_site_9359 iPseU_CNN:0;iRNA_PseU:0 9360 chr4 166231868 166231868 1 + A G rs28678193 166231867 + 166231847 166231887 41 AGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCT AGCTGCTGTGTTAAATGGATTGTTATACGCTGTGGGAGGCT < 41bp 0.886154761621144 0.5362173873695 0.57889557 0.34968215 prediction 0.699874748503289 Functional Loss - KLHL2 ENSG00000109466 CDS Human protein_coding chr4:166231867 chr4:166231868 synonymous SNV . 0 22 hPsi_associated_SNPs_3943 0 0 1 0 1 chromatin 0.438718592842446 0.438718592534977 0.15779114 0 hPsi_site_9360 iPseU_CNN:0.15779114;iRNA_PseU:0 9361 chrX 150913373 150913373 1 + A G rs138480757 150913372 + 150913352 150913392 41 GAGCACCGACTATAGACATTTAGATCAGGTACCCAGTGTCT GAGCACCGACTATAGACATTTGGATCAGGTACCCAGTGTCT < 41bp 0.869645196128331 0.519729714354335 0.47579342 0.33831716 prediction 0.699830963547993 Functional Loss - CNGA2 ENSG00000183862 UTR3 Human protein_coding chrX:150913372 chrX:150913373 . . 0 22 hPsi_associated_SNPs_3944 0 0 0 0 0 unknown 0.438630479002085 0.438721683581725 0 0 hPsi_site_9361 iPseU_CNN:0;iRNA_PseU:0 9362 chr14 21811292 21811292 1 + A G STAD 21811291 + 21811271 21811311 41 TAAAACAGGTGTATGTGGAGTACAAATTCTACGACCTACCC TAAAACAGGTGTATGTGGAGTGCAAATTCTACGACCTACCC < 41bp 0.88552404756545 0.535609668501865 0.42607832 0.32811266 prediction 0.699828758127168 Functional Loss - RPGRIP1 ENSG00000092200 CDS Human protein_coding chr14:21811291 chr14:21811292 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_3945 0 0 0 0 1 chromatin 0.438066302236478 0.438396612187423 0 0 hPsi_site_9362 iPseU_CNN:0;iRNA_PseU:0 9363 chr22 41257742 41257742 1 + T C COAD 41257743 - 41257723 41257763 41 ATTTTGATGATGAATGTGAGTACGGCTTCACATTCCATAAG ATTTTGATGATGAATGTGAGTGCGGCTTCACATTCCATAAG < 41bp 0.860249956819037 0.510336321040185 0.42317402 0.32689548 prediction 0.699827271557704 Functional Loss - DNAJB7 ENSG00000172404 CDS Human protein_coding chr22:41257743 chr22:41257742 nonsynonymous SNV 0.049 1 22 hPsi_associated_SNPs_3946 0 0 0 0 0 exosome 0.438149776264595 0.438568142464879 0 0 hPsi_site_9363 iPseU_CNN:0;iRNA_PseU:0 9364 chr20 42966054 42966054 1 + A G UCEC 42966053 + 42966033 42966073 41 CACCTGCCGCCAACATGGAATACATGGTGAGTCCCCGTACC CACCTGCCGCCAACATGGAATGCATGGTGAGTCCCCGTACC < 41bp 0.876164136865174 0.526269813341092 0.69576836 0.4250049 prediction 0.699788647048165 Functional Loss - R3HDML ENSG00000101074 CDS Human protein_coding chr20:42966053 chr20:42966054 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_3947 0 0 0 0 1 cytosol 0.438718592995102 0.438718592995102 0.39153672 0 hPsi_site_9364 iPseU_CNN:0.39153672;iRNA_PseU:0 9365 chr3 152880694 152880694 1 + A G UCEC 152880693 + 152880673 152880713 41 TCGCGTCCATGCGGGACCTGTACATCAAGAACGGCCAGGGC TCGCGTCCATGCGGGACCTGTGCATCAAGAACGGCCAGGGC < 41bp 0.871360503812778 0.521474754677722 0.67124003 0.33415526 prediction 0.699771498270112 Functional Loss - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880693 chr3:152880694 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_3948 0 0 0 0 0 Ribosome 0.438752951806861 0.438724739278427 0.34248006 0 hPsi_site_9365 iPseU_CNN:0.34248006;iRNA_PseU:0 9366 chr10 81444490 81444490 1 + A G rs372193020 81444489 + 81444469 81444509 41 CTCGCGCCTGCTGGTGCCCCTATTCCCCAAGCTCTTCACCC CTCGCGCCTGCTGGTGCCCCTGTTCCCCAAGCTCTTCACCC < 41bp 0.85428113432463 0.504403781806448 0.52973855 0.28401956 prediction 0.699754705036365 Functional Loss - BEND3P3 ENSG00000224886 ncRNA_exonic Human transcribed_processed_pseudogene chr10:81444489 chr10:81444490 . . 0 22 hPsi_associated_SNPs_3949 0 0 0 0 0 unknown 0.438770941027607 0.439023712251346 0.0594771000000001 0 hPsi_site_9366 iPseU_CNN:0.0594771000000001;iRNA_PseU:0 9367 chr10 70546361 70546361 1 + A G HNSC 70546360 + 70546340 70546380 41 ATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGT ATCTGTTAATGGCTTTTGTTTGTTTTGATCAAAGTCATTGT < 41bp 0.870200633505315 0.520329536363267 0.6060124 0.380257 prediction 0.699742194284095 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70546360 chr10:70546361 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3950 0 0 1 0 2 Nucleus 0.441048609317806 0.440930985502404 0.2120248 0 hPsi_site_9367 iPseU_CNN:0.2120248;iRNA_PseU:0 9368 chr11 48238714 48238714 1 + A G rs531475732 48238713 + 48238693 48238733 41 TTTTGATTGTGGTGATGGCCTATGATTGCTACGTGGCCATT TTTTGATTGTGGTGATGGCCTGTGATTGCTACGTGGCCATT < 41bp 0.849866244489955 0.488687598015145 0.60443413 0.31870222 prediction 0.699732488979911 Functional Loss - OR4B1 ENSG00000175619 CDS Human protein_coding chr11:48238713 chr11:48238714 nonsynonymous SNV 0.023 4 22 hPsi_associated_SNPs_3951 0 0 0 0 0 unknown 0.438718616769032 0.438718603391462 0.20886826 0 hPsi_site_9368 iPseU_CNN:0.20886826;iRNA_PseU:0 9369 chr13 103514541 103514541 1 + A G STAD 103514540 + 103514520 103514560 41 TCTCCAAGAACTTTACTAGCTATGCAAGCTGCCCTGCTGGG TCTCCAAGAACTTTACTAGCTGTGCAAGCTGCCCTGCTGGG < 41bp 0.849857463415931 0.456481083315063 0.2748698 0.22523823 prediction 0.699714926831862 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514540 chr13:103514541 nonsynonymous SNV 0.115 0 22 hPsi_associated_SNPs_3952 0 0 1 1 0 unknown 0.438722946560998 0.43861171723462 0 0 hPsi_site_9369 iPseU_CNN:0;iRNA_PseU:0 9370 chr13 20233374 20233374 1 + A G GBM 20233373 + 20233353 20233393 41 ATGCTGTGAAAAATGGGGATTATATTACTGTAAAAGTTGCA ATGCTGTGAAAAATGGGGATTGTATTACTGTAAAAGTTGCA < 41bp 0.849842051226229 0.464611100583623 0.21591192 0.19522607 prediction 0.699684102452459 Functional Loss - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20233373 chr13:20233374 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3953 0 0 1 0 2 Ribosome 0.438718656404166 0.438718626784899 0 0 hPsi_site_9370 iPseU_CNN:0;iRNA_PseU:0 9371 chr11 43920006 43920006 1 + A G rs7107050 43920005 + 43919985 43920025 41 AAAGATGGGTGGCCCCTCTGTATGCTCAGGCTGGGGCAGAT AAAGATGGGTGGCCCCTCTGTGTGCTCAGGCTGGGGCAGAT < 41bp 0.84984127323632 0.478547987521764 0.6614388 0.43386793 prediction 0.699682546472641 Functional Loss - SEC14L1P1 ENSG00000213693 ncRNA_exonic Human processed_pseudogene chr11:43920005 chr11:43920006 . . 0 22 hPsi_associated_SNPs_3954 0 0 0 0 0 unknown 0.43872026871891 0.438718680801347 0.3228776 0 hPsi_site_9371 iPseU_CNN:0.3228776;iRNA_PseU:0 9372 chr1 43919081 43919081 1 + T C rs142369206 43919082 - 43919062 43919102 41 GACTGGAGCAGGCCGTGCGGTATGCCAAAGCCCTGGGCTGT GACTGGAGCAGGCCGTGCGGTGTGCCAAAGCCCTGGGCTGT < 41bp 0.880060735821453 0.530225375435056 0.90884674 0.5388163 prediction 0.699670720772796 Functional Loss - HYI ENSG00000178922 CDS Human protein_coding chr1:43919082 chr1:43919081 nonsynonymous SNV 0.467 2 22 hPsi_associated_SNPs_3955 0 0 0 0 2 Ribosome 0.438779260112759 0.438742948687669 0.74006088 0 hPsi_site_9372 iPseU_CNN:0.74006088;iRNA_PseU:0 Parkinson's disease 9373 chr1 35857881 35857881 1 + A G ESCA 35857880 + 35857860 35857900 41 AGAAAAGATTCGACTCCAGTTATAGCCAATGTAGTATCATT AGAAAAGATTCGACTCCAGTTGTAGCCAATGTAGTATCATT < 41bp 0.878778000341223 0.528943229525434 0.7209408 0.33320296 prediction 0.699669541631579 Functional Loss - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35857880 chr1:35857881 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_3956 0 0 1 0 2 Cytosol 0.438703732433153 0.438622376789369 0.4418816 0 hPsi_site_9373 iPseU_CNN:0.4418816;iRNA_PseU:0 9374 chr1 111690503 111690503 1 + A G UCEC 111690502 + 111690482 111690522 41 AGCGGCTAGAAGAACACAGATATCAAAGTGCTGGACGGTCC AGCGGCTAGAAGAACACAGATGTCAAAGTGCTGGACGGTCC < 41bp 0.877195590320627 0.527371495511365 0.2856354 0.2217009 prediction 0.699648189618524 Functional Loss - CEPT1 ENSG00000134255 CDS Human protein_coding chr1:111690502 chr1:111690503 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3957 0 0 1 0 0 Endoplasmic reticulum 0.438780288727731 0.438730690096077 0 0 hPsi_site_9374 iPseU_CNN:0;iRNA_PseU:0 9375 chr5 149360771 149360771 1 + A G GBM 149360770 + 149360750 149360790 41 CTTGTTGGGGTTTGTTTTTCTATATTTTGTGTCATCCTCCG CTTGTTGGGGTTTGTTTTTCTGTATTTTGTGTCATCCTCCG < 41bp 0.849801434743847 0.480742314677614 0.29140705 0.29017198 prediction 0.699602869487694 Functional Loss - SLC26A2 ENSG00000155850 CDS Human protein_coding chr5:149360770 chr5:149360771 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3958 0 0 1 0 0 Endoplasmic reticulum 0.438718599371165 0.438718409277347 0 0 hPsi_site_9375 iPseU_CNN:0;iRNA_PseU:0 9376 chr9 131671401 131671401 1 + A G LUAD 131671400 + 131671380 131671420 41 TGTGGTACAACCACATCGCCTACATCCCCATCCAGATCGGC TGTGGTACAACCACATCGCCTGCATCCCCATCCAGATCGGC < 41bp 0.881305832972405 0.531524532239629 0.7273576 0.33604825 prediction 0.699562601465552 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671400 chr9:131671401 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_3959 0 0 1 0 0 Endoplasmic reticulum 0.438721854029728 0.438761785455686 0.4547152 0 hPsi_site_9376 iPseU_CNN:0.4547152;iRNA_PseU:0 9377 chr5 139947716 139947716 1 + A G UCEC 139947715 + 139947695 139947735 41 GCCTGGCCATGCGCCTGTACTATGGCAGCCGCTAGTCCCTG GCCTGGCCATGCGCCTGTACTGTGGCAGCCGCTAGTCCCTG < 41bp 0.880724760208808 0.530946547095926 0.66443586 0.4472115 prediction 0.699556426225763 Functional Loss - SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139947715 chr5:139947716 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3960 0 0 1 0 0 Ribosome 0.438718909475669 0.438718353685801 0.32887172 0 hPsi_site_9377 iPseU_CNN:0.32887172;iRNA_PseU:0 9378 chr6 18222170 18222170 1 + A G BLCA 18222169 + 18222149 18222189 41 AGGCATTTCCCACAAACTGTTACAGGGGCATATTTGAGTGG AGGCATTTCCCACAAACTGTTGCAGGGGCATATTTGAGTGG < 41bp 0.876132529592999 0.526364624452309 0.8480965 0.33617288 prediction 0.699535810281379 Functional Loss - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18222169 chr6:18222170 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_3961 0 0 0 0 1 Cytosol 0.438697024533052 0.438637096659323 0.696193 0 hPsi_site_9378 iPseU_CNN:0.696193;iRNA_PseU:0 9379 chr15 90794031 90794031 1 + A C rs116248523 90794030 + 90794010 90794050 41 AATGGGGTTCCCTCACCCATTATGGCCACAAAAATTCCGAA AATGGGGTTCCCTCACCCATTCTGGCCACAAAAATTCCGAA < 41bp 0.852663188567688 0.50292034643394 0.36578643 0.29592317 prediction 0.699485684267495 Functional Loss - TTLL13P ENSG00000213471;ENSG00000261147 CDS Human other chr15:90794030 chr15:90794031 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_3962 0 0 0 0 1 unknown 0.440081913774554 0.438718591384311 0 0 hPsi_site_9379 iPseU_CNN:0;iRNA_PseU:0 9380 chr21 43524014 43524014 1 + T C UCEC 43524015 - 43523995 43524035 41 TTCTCAGCTTCCCACTTCGGTACAAGTCAGACACCACTGGT TTCTCAGCTTCCCACTTCGGTGCAAGTCAGACACCACTGGT < 41bp 0.884187781453592 0.534445556701308 0.9541734 0.63614583 prediction 0.699484449504567 Functional Loss - UMODL1 ENSG00000177398;ENSG00000184385 CDS Human other chr21:43524015 chr21:43524014 nonsynonymous SNV 0.084 0 22 hPsi_associated_SNPs_3963 0 0 0 0 0 exosome 0.426691616764239 0.427445855896336 0.63605514 0 hPsi_site_9380 iPseU_CNN:0.63605514;iRNA_PseU:0 9381 chr17 78681741 78681741 1 + A G COAD 78681740 + 78681720 78681760 41 AGGAGCGAGTCCTCTTTCACTACAATGGCCACGGGGTGCCC AGGAGCGAGTCCTCTTTCACTGCAATGGCCACGGGGTGCCC < 41bp 0.849733705999659 0.476802944670389 0.50424886 0.31690007 prediction 0.699467411999318 Functional Loss - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78681740 chr17:78681741 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3964 0 0 1 0 1 Nucleus 0.432987064631192 0.4387221127823 0.00849772000000004 0 hPsi_site_9381 iPseU_CNN:0.00849772000000004;iRNA_PseU:0 9382 chr12 57918847 57918847 1 + A G BRCA 57918846 + 57918826 57918866 41 CACCGGCGGAAAGCTGTTGCTATGGCAACTCTGTACCGCAG CACCGGCGGAAAGCTGTTGCTGTGGCAACTCTGTACCGCAG < 41bp 0.885333398066752 0.53563561387677 0.40331239 0.2920255 prediction 0.699395568379965 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57918846 chr12:57918847 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_3965 0 0 1 0 1 chromatin 0.438718428868131 0.438712732901266 0 0 hPsi_site_9382 iPseU_CNN:0;iRNA_PseU:0 9383 chr6 26156830 26156830 1 + A G BLCA 26156829 + 26156809 26156849 41 AAGCGCTGGCAGCCGCTGGCTATGACGTGGAGAAGAACAAC AAGCGCTGGCAGCCGCTGGCTGTGACGTGGAGAAGAACAAC < 41bp 0.873283263805093 0.523610895974457 0.15971792 0.15645716 prediction 0.699344735661273 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156829 chr6:26156830 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_3966 0 0 1 0 0 Ribosome 0.439137537267603 0.439045741966543 0 0 hPsi_site_9383 iPseU_CNN:0;iRNA_PseU:0 9384 chr18 29671854 29671854 1 + A G rs562752866 29671853 + 29671833 29671873 41 AGGCGCCGTGCGCCGGTTGCTATACAGGCCGCACTTCACAC AGGCGCCGTGCGCCGGTTGCTGTACAGGCCGCACTTCACAC < 41bp 0.851004861840829 0.501392875175811 0.88251144 0.6140065 prediction 0.699223973330036 Functional Loss - RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29671853 chr18:29671854 . . 0 22 hPsi_associated_SNPs_3967 0 0 1 0 0 Cytosol 0.438694032686975 0.438705913120858 0.53700988 0 hPsi_site_9384 iPseU_CNN:0.53700988;iRNA_PseU:0 9385 chr5 140774618 140774618 1 + A G COAD 140774617 + 140774597 140774637 41 TTTTGTGGGTGTTGAGGAGGTACAGGCTTTCCTGCAGACCT TTTTGTGGGTGTTGAGGAGGTGCAGGCTTTCCTGCAGACCT < 41bp 0.849610582892864 0.489493985465367 0.7381946 0.29380566 prediction 0.699221165785727 Functional Loss - PCDHGA8 ENSG00000253767 CDS Human protein_coding chr5:140774617 chr5:140774618 synonymous SNV . 0 22 hPsi_associated_SNPs_3968 0 0 0 0 0 exosome 0.438718589241733 0.438718592991236 0.4763892 0 hPsi_site_9385 iPseU_CNN:0.4763892;iRNA_PseU:0 9386 chr1 161695856 161695856 1 + A G STAD 161695855 + 161695835 161695875 41 AGCGCGCCCATGTTCTCCGCTAAGGTGGCTGTGACAGTGCA AGCGCGCCCATGTTCTCCGCTGAGGTGGCTGTGACAGTGCA < 41bp 0.880897795017174 0.531294012314868 0.35531804 0.31356043 prediction 0.699207565404614 Functional Loss - FCRLB ENSG00000162746 CDS Human protein_coding chr1:161695855 chr1:161695856 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_3969 0 0 0 0 1 Endoplasmic reticulum 0.437512461239555 0.438449312786388 0 0 hPsi_site_9386 iPseU_CNN:0;iRNA_PseU:0 9387 chr19 38853095 38853095 1 + A G rs182097373 38853094 + 38853074 38853114 41 TGGACAGCTACGAAAAGATCTACAACCTCGAGTCCGCGTAC TGGACAGCTACGAAAAGATCTGCAACCTCGAGTCCGCGTAC < 41bp 0.849602275908984 0.446291545748976 0.79368746 0.7439687 prediction 0.699204551817969 Functional Loss - CATSPERG ENSG00000099338 CDS Human protein_coding chr19:38853094 chr19:38853095 nonsynonymous SNV 0.370 3 22 hPsi_associated_SNPs_3970 0 0 0 0 1 chromatin 0.438718751729817 0.438718063074356 0.0994375199999999 0 hPsi_site_9387 iPseU_CNN:0.0994375199999999;iRNA_PseU:0 9388 chr7 123508629 123508629 1 + A G BRCA 123508628 + 123508608 123508648 41 GATTGGGATACTATCCGTGGTATACATCACAAGGGGTCCCC GATTGGGATACTATCCGTGGTGTACATCACAAGGGGTCCCC < 41bp 0.883567051363505 0.533976020890393 0.8173156 0.34210712 prediction 0.699182060946224 Functional Loss - HYAL4 ENSG00000106302 CDS Human protein_coding chr7:123508628 chr7:123508629 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_3971 0 0 0 0 0 Nucleus 0.438718582978527 0.438717537313662 0.6346312 0 hPsi_site_9388 iPseU_CNN:0.6346312;iRNA_PseU:0 9389 chr12 113515367 113515367 1 + A G UCEC 113515366 + 113515346 113515386 41 GCATCACCATCCAGAACGCCTACGAGAAGCAGCACCCGTGG GCATCACCATCCAGAACGCCTGCGAGAAGCAGCACCCGTGG < 41bp 0.886887083508038 0.53731910482639 0.74546 0.2775824 prediction 0.699135957363295 Functional Loss - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113515366 chr12:113515367 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3972 0 0 0 0 0 Endoplasmic reticulum 0.438710011141041 0.438721783828911 0.49092 0 hPsi_site_9389 iPseU_CNN:0.49092;iRNA_PseU:0 9390 chr20 61594020 61594020 1 + A G UCEC 61594019 + 61593999 61594039 41 GCTCCCTGCTCCTGGAATGGTACGGCTGGCAGAGCATCTTC GCTCCCTGCTCCTGGAATGGTGCGGCTGGCAGAGCATCTTC < 41bp 0.895200605638815 0.545636792590579 0.58019936 0.2664866 prediction 0.699127626096472 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61594019 chr20:61594020 nonsynonymous SNV 0.335 0 22 hPsi_associated_SNPs_3973 0 0 1 0 2 Ribosome 0.438718589321365 0.438718592857696 0.16039872 0 hPsi_site_9390 iPseU_CNN:0.16039872;iRNA_PseU:0 9391 chr19 12060983 12060983 1 + A G KIRC 12060982 + 12060962 12061002 41 AATGCGGAAAAGCATTCAATTATTTTTCTTCCTTGCATATA AATGCGGAAAAGCATTCAATTGTTTTTCTTCCTTGCATATA < 41bp 0.849539438418311 0.492448638490945 0.44742417 0.30985153 prediction 0.699078876836622 Functional Loss - ZNF700 ENSG00000196757 CDS Human protein_coding chr19:12060982 chr19:12060983 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_3974 0 0 1 0 0 chromatin 0.438718045734579 0.43870999728556 0 0 hPsi_site_9391 iPseU_CNN:0;iRNA_PseU:0 9392 chr1 32504202 32504202 1 + A G LUSC 32504201 + 32504181 32504221 41 GTTACGAAGGCTACGAAGGCTATTACAGCCAGAGTCAAGGG GTTACGAAGGCTACGAAGGCTGTTACAGCCAGAGTCAAGGG < 41bp 0.849536551705986 0.467283659972866 0.5617821 0.30759412 prediction 0.699073103411971 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32504201 chr1:32504202 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_3975 0 0 1 0 1 Nucleus 0.43874197072475 0.438723006860016 0.1235642 0 hPsi_site_9392 iPseU_CNN:0.1235642;iRNA_PseU:0 9393 chr17 48598498 48598498 1 + A G STAD 48598497 + 48598477 48598517 41 CAGCCCAGAGGGACGCTTCATACCGCTACACCTGGGATCGG CAGCCCAGAGGGACGCTTCATGCCGCTACACCTGGGATCGG < 41bp 0.849503268468335 0.446104734992158 0.41089308 0.18621972 prediction 0.69900653693667 Functional Loss - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48598497 chr17:48598498 nonsynonymous SNV 0.955 1 22 hPsi_associated_SNPs_3976 0 0 0 0 2 exosome 0.438718377019231 0.438718732508951 0 0 hPsi_site_9393 iPseU_CNN:0;iRNA_PseU:0 9394 chr5 140481921 140481921 1 + A G UCEC 140481920 + 140481900 140481940 41 ACAACTCGCCCTTCGTGCTGTACCCGCTGCAGAACGGCTCC ACAACTCGCCCTTCGTGCTGTGCCCGCTGCAGAACGGCTCC < 41bp 0.879115789787333 0.529649637577828 0.5627686 0.16445619 prediction 0.69893230441901 Functional Loss - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481920 chr5:140481921 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_3977 0 0 0 0 0 exosome 0.438719189391492 0.43871864075729 0.1255372 0 hPsi_site_9394 iPseU_CNN:0.1255372;iRNA_PseU:0 9395 chr1 43647259 43647259 1 + A G UCEC 43647258 + 43647238 43647278 41 CCATCAGTCCCAATCGGCGGTACCTCGCTATCTCTGAGACT CCATCAGTCCCAATCGGCGGTGCCTCGCTATCTCTGAGACT < 41bp 0.88885284518679 0.539402220759551 0.71915317 0.31454206 prediction 0.698901248854478 Functional Loss - CFAP57 ENSG00000243710 CDS Human protein_coding chr1:43647258 chr1:43647259 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_3978 0 0 0 0 1 exosome 0.438721356677191 0.43871935022872 0.43830634 0 hPsi_site_9395 iPseU_CNN:0.43830634;iRNA_PseU:0 9396 chr1 63877667 63877667 1 + A G rs61755863 63877666 + 63877646 63877686 41 CTCTGCTGGCTGCCATTCTTTACAGAAAGGGAACAAACCCT CTCTGCTGGCTGCCATTCTTTGCAGAAAGGGAACAAACCCT < 41bp 0.849427053885698 0.450259680752135 0.8260498 0.3012038 prediction 0.698854107771396 Functional Loss - ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877666 chr1:63877667 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_3979 2 0 0 3 1 Endoplasmic reticulum 0.438718502855982 0.438718578889428 0.6520996 0 hPsi_site_9396 iPseU_CNN:0.6520996;iRNA_PseU:0 Diastolic blood pressure x alcohol consumption interaction (2df test) 9397 chrX 100668329 100668329 1 + A G rs377309764 100668328 + 100668308 100668348 41 TCAGTCAAACCTTGCTTAGGTAGAGAAGGAGCACTAAATAG TCAGTCAAACCTTGCTTAGGTGGAGAAGGAGCACTAAATAG < 41bp 0.869249641666515 0.519831260547392 0.24375072 0.17066488 prediction 0.698836762238246 Functional Loss - HNRNPH2;RPL36A-HNRNPH2 ENSG00000126945 UTR3 Human protein_coding chrX:100668328 chrX:100668329 . . 0 22 hPsi_associated_SNPs_3980 0 0 1 12 0 unknown 0.438718592994899 0.438718566825059 0 0 hPsi_site_9397 iPseU_CNN:0;iRNA_PseU:0 9398 chr5 147693777 147693777 1 + A G UCEC 147693776 + 147693756 147693796 41 GGGAATGAATGTCACTTGTGTACCGAGAGCTTGTGAGTACC GGGAATGAATGTCACTTGTGTGCCGAGAGCTTGTGAGTACC < 41bp 0.849392163508097 0.474830152192463 0.47236866 0.27409634 prediction 0.698784327016193 Functional Loss - SPINK7 ENSG00000145879 CDS Human protein_coding chr5:147693776 chr5:147693777 nonsynonymous SNV 0.677 0 22 hPsi_associated_SNPs_3981 0 0 0 0 1 unknown 0.438667066915861 0.438832697079627 0 0 hPsi_site_9398 iPseU_CNN:0;iRNA_PseU:0 9399 chr2 95542358 95542358 1 + A G LUSC 95542357 + 95542337 95542377 41 AGCACTGCGAGAGAAGCTTCTAGAAGCGGAGCAGTCCCTGC AGCACTGCGAGAGAAGCTTCTGGAAGCGGAGCAGTCCCTGC < 41bp 0.882562950542676 0.533173723022456 0.41763327 0.18663153 prediction 0.698778455040439 Functional Loss - TEKT4 ENSG00000163060 CDS Human protein_coding chr2:95542357 chr2:95542358 synonymous SNV . 0 22 hPsi_associated_SNPs_3982 0 0 0 0 1 chromatin 0.438718750969859 0.438718681453594 0 0 hPsi_site_9399 iPseU_CNN:0;iRNA_PseU:0 9400 chr20 76711 76711 1 + A G UCEC 76710 + 76690 76730 41 TGCAGAAGACGATGTTTAGATACTGAAAGGTACATACTTCT TGCAGAAGACGATGTTTAGATGCTGAAAGGTACATACTTCT < 41bp 0.849381858782218 0.481150151841872 0.41044337 0.17641926 prediction 0.698763717564436 Functional Loss - DEFB125 ENSG00000178591 CDS Human protein_coding chr20:76710 chr20:76711 nonsynonymous SNV 0.097 0 22 hPsi_associated_SNPs_3983 0 0 0 0 1 unknown 0.438865977233313 0.473051932210562 0 0 hPsi_site_9400 iPseU_CNN:0;iRNA_PseU:0 9401 chr7 26411492 26411492 1 + A G UCEC 26411491 + 26411471 26411511 41 TAGCAGCCTTCACCTCTTCTTACAGAGCCATCTGAATTCAG TAGCAGCCTTCACCTCTTCTTGCAGAGCCATCTGAATTCAG < 41bp 0.889209310285242 0.539827595751536 0.65141344 0.33301887 prediction 0.698763429067413 Functional Loss - SNX10 ENSG00000086300 CDS Human protein_coding chr7:26411491 chr7:26411492 synonymous SNV . 0 22 hPsi_associated_SNPs_3984 0 0 1 0 0 membrane 0.438718599146991 0.438718592995369 0.30282688 0 hPsi_site_9401 iPseU_CNN:0.30282688;iRNA_PseU:0 9402 chr5 72201204 72201204 1 + A G LUAD 72201203 + 72201183 72201223 41 TGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCAGCTT TGACCAGTTTCCTCTTCCCTTGAAAGAGCGTCTTGCAGCTT < 41bp 0.849359823947581 0.478097077152659 0.29731518 0.31770658 prediction 0.698719647895162 Functional Loss - TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72201203 chr5:72201204 synonymous SNV . 0 22 hPsi_associated_SNPs_3985 0 0 1 0 1 Cytosol 0.438077760547084 0.438713293243646 0 0 hPsi_site_9402 iPseU_CNN:0;iRNA_PseU:0 9403 chr4 41941236 41941236 1 + A G UCEC 41941235 + 41941215 41941255 41 TGCATGAAGCAGCAAGCTTTTACCAACGTGCTTTGCTGGCA TGCATGAAGCAGCAAGCTTTTGCCAACGTGCTTTGCTGGCA < 41bp 0.849341563412184 0.468769308280957 0.5681931 0.35680288 prediction 0.698683126824369 Functional Loss - TMEM33 ENSG00000109133 CDS Human protein_coding chr4:41941235 chr4:41941236 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_3986 0 0 1 0 1 Ribosome 0.438325832998406 0.435498134228525 0.1363862 0 hPsi_site_9403 iPseU_CNN:0.1363862;iRNA_PseU:0 9404 chr19 41594540 41594540 1 + A G OV 41594539 + 41594519 41594559 41 AGCTGAACACAGAGCAGATGTACAACTCCCTCATGAAGGTG AGCTGAACACAGAGCAGATGTGCAACTCCCTCATGAAGGTG < 41bp 0.871941917818528 0.522675199348338 0.77208066 0.46949115 prediction 0.698533436940378 Functional Loss - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41594539 chr19:41594540 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_3987 0 0 0 0 1 unknown 0.43871872438344 0.438719061803823 0.54416132 0 hPsi_site_9404 iPseU_CNN:0.54416132;iRNA_PseU:0 9405 chr15 63894319 63894319 1 + A G rs186182706 63894318 + 63894298 63894338 41 CCAGCTGCGACAAAGCCCTTTACCCCTCCCAGGCCAGGTGT CCAGCTGCGACAAAGCCCTTTGCCCCTCCCAGGCCAGGTGT < 41bp 0.850881195614475 0.501621197078136 0.283421 0.18002453 prediction 0.698519997072679 Functional Loss - FBXL22 ENSG00000197361 UTR3 Human protein_coding chr15:63894318 chr15:63894319 . . 0 22 hPsi_associated_SNPs_3988 0 0 0 0 0 Nucleus 0.438718592995105 0.438718592995102 0 0 hPsi_site_9405 iPseU_CNN:0;iRNA_PseU:0 9406 chr8 91029487 91029487 1 + A G COAD 91029486 + 91029466 91029506 41 GCATTCATTACTGGGGGAGGTACTGGCCTTGGTAAAGGAAT GCATTCATTACTGGGGGAGGTGCTGGCCTTGGTAAAGGAAT < 41bp 0.882388098186779 0.533160085364704 0.4711832 0.12166178 prediction 0.69845602564415 Functional Loss - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91029486 chr8:91029487 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_3989 0 0 0 0 1 Cytosol 0.43871851617395 0.43871859586762 0 0 hPsi_site_9406 iPseU_CNN:0;iRNA_PseU:0 9407 chr19 41925091 41925091 1 + A G UCEC 41925090 + 41925070 41925110 41 AACTATTCATGGCCCAGTGCTATGGCAACATCAGTGACTTG AACTATTCATGGCCCAGTGCTGTGGCAACATCAGTGACTTG < 41bp 0.849211249179101 0.441576615570161 0.20582485 0.16506615 prediction 0.698422498358202 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41925090 chr19:41925091 nonsynonymous SNV 0.953 2 22 hPsi_associated_SNPs_3990 0 0 1 0 1 Cytosol 0.438689766317329 0.438542563404455 0 0 hPsi_site_9407 iPseU_CNN:0;iRNA_PseU:0 9408 chr9 98231257 98231257 1 + A G UCEC 98231256 + 98231236 98231276 41 AGCGCGGCTCAGCGGTGGTGTAGTACACGTGCGTGTGGGGG AGCGCGGCTCAGCGGTGGTGTGGTACACGTGCGTGTGGGGG < 41bp 0.885707519350052 0.53650466980952 0.6015624 0.25267893 prediction 0.698405699081064 Functional Loss - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98231256 chr9:98231257 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_3991 0 0 0 0 0 Endoplasmic reticulum 0.438717773891954 0.438251645212597 0.2031248 0 hPsi_site_9408 iPseU_CNN:0.2031248;iRNA_PseU:0 9409 chr13 25671611 25671611 1 + A G SKCM 25671610 + 25671590 25671630 41 TCCTAGCCAAATTGCTCGACTAAGACCAAGTCCTCGCTGGA TCCTAGCCAAATTGCTCGACTGAGACCAAGTCCTCGCTGGA < 41bp 0.849198128720168 0.468702868983092 0.8989146 0.34826297 prediction 0.698396257440337 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671610 chr13:25671611 synonymous SNV . 0 22 hPsi_associated_SNPs_3992 0 0 1 0 0 Cytosol 0.438718593009264 0.438716131766816 0.7978292 0 hPsi_site_9409 iPseU_CNN:0.7978292;iRNA_PseU:0 9410 chr19 1377484 1377484 1 + A G rs144458221 1377483 + 1377463 1377503 41 TGGCAGAAGCGCAGCCTTTGTATGGAGGCCCAACCGCGCTC TGGCAGAAGCGCAGCCTTTGTGTGGAGGCCCAACCGCGCTC < 41bp 0.849190900429945 0.496357245084215 0.4140068 0.34510136 prediction 0.69838180085989 Functional Loss - MUM1 ENSG00000267755 ncRNA_exonic Human antisense chr19:1377483 chr19:1377484 . . 0 22 hPsi_associated_SNPs_3993 0 0 1 0 0 Cytosol 0.438718598423637 0.438718607673744 0 0 hPsi_site_9410 iPseU_CNN:0;iRNA_PseU:0 9411 chr1 111998734 111998734 1 + A G rs151112830 111998733 + 111998713 111998753 41 TATGTACTCGGAACTGGGCTTATCTTGTACGCTTTATCCAA TATGTACTCGGAACTGGGCTTGTCTTGTACGCTTTATCCAA < 41bp 0.876781862031744 0.527599347133658 0.8437472 0.5591431 prediction 0.698365029796171 Functional Loss - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:111998733 chr1:111998734 nonsynonymous SNV 0.942 1 22 hPsi_associated_SNPs_3994 0 0 1 0 1 Ribosome 0.438718593279354 0.438718591882789 0.5692082 0 hPsi_site_9411 iPseU_CNN:0.5692082;iRNA_PseU:0 9412 chr1 155110714 155110714 1 + A G UCEC 155110713 + 155110693 155110733 41 GCTTCTGGCTTTTCTGGAAGTACCCCCAGGAGCAAGACAGG GCTTCTGGCTTTTCTGGAAGTGCCCCCAGGAGCAAGACAGG < 41bp 0.84917073558889 0.467133141930053 0.34313232 0.12934303 prediction 0.698341471177779 Functional Loss - SLC50A1 ENSG00000169241 CDS Human protein_coding chr1:155110713 chr1:155110714 nonsynonymous SNV 0.879 4 22 hPsi_associated_SNPs_3995 0 0 1 1 1 chromatin 0.438718597101985 0.43871859318189 0 0 hPsi_site_9412 iPseU_CNN:0;iRNA_PseU:0 9413 chr6 3263936 3263936 1 + A G SARC 3263935 + 3263915 3263955 41 TAGGACTCCATCCCCGTGTCTACCTCCCTCCTTGGAGACAC TAGGACTCCATCCCCGTGTCTGCCTCCCTCCTTGGAGACAC < 41bp 0.849167550877408 0.445323728810398 0.8540046 0.34577182 prediction 0.698335101754815 Functional Loss - PSMG4 ENSG00000180822 CDS Human protein_coding chr6:3263935 chr6:3263936 nonsynonymous SNV 0.946 2 22 hPsi_associated_SNPs_3996 0 0 1 0 2 Cytosol 0.438718592992197 0.438718594733549 0.7080092 0 hPsi_site_9413 iPseU_CNN:0.7080092;iRNA_PseU:0 9414 chr9 36170443 36170443 1 + A G UCEC 36170442 + 36170422 36170462 41 TGAAGCTCTCAGACATGCCCTATCGGGCAGCAGCACTTAGT TGAAGCTCTCAGACATGCCCTGTCGGGCAGCAGCACTTAGT < 41bp 0.849164668060164 0.457390759164199 0.22928342 0.19073057 prediction 0.698329336120328 Functional Loss - CCIN ENSG00000185972 CDS Human protein_coding chr9:36170442 chr9:36170443 nonsynonymous SNV 0.741 3 22 hPsi_associated_SNPs_3997 0 0 0 0 0 exosome 0.438702724547286 0.438615850567382 0 0 hPsi_site_9414 iPseU_CNN:0;iRNA_PseU:0 9415 chr6 7411581 7411581 1 + A G LUSC 7411580 + 7411560 7411600 41 GTTAGGTGTTTAAGCGAGCATATATTCCTAGAACCTTGAAT GTTAGGTGTTTAAGCGAGCATGTATTCCTAGAACCTTGAAT < 41bp 0.849110464816067 0.472265447277036 0.3402246 0.22009137 prediction 0.698220929632135 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7411580 chr6:7411581 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_3998 0 0 1 0 1 Ribosome 0.438715627652459 0.438717255278452 0 0 hPsi_site_9415 iPseU_CNN:0;iRNA_PseU:0 9416 chr4 1243794 1243794 1 + A G rs74987021 1243793 + 1243773 1243813 41 TCTCCCGAGGGGCCCAGGGATATTCCTCGCGCCGCGAGTGG TCTCCCGAGGGGCCCAGGGATGTTCCTCGCGCCGCGAGTGG < 41bp 0.849103420402869 0.481344340354864 0.78311926 0.3069531 prediction 0.698206840805738 Functional Loss - CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1243793 chr4:1243794 . . 0 22 hPsi_associated_SNPs_3999 0 0 1 0 0 unknown 0.438723995581275 0.438716537005203 0.56623852 0 hPsi_site_9416 iPseU_CNN:0.56623852;iRNA_PseU:0 9417 chr1 162560125 162560125 1 + A G rs143903373 162560124 + 162560104 162560144 41 TCGCTCTAGGAAGTTTGTGGTATATGAAGTATTGCGAGAAG TCGCTCTAGGAAGTTTGTGGTGTATGAAGTATTGCGAGAAG < 41bp 0.84908483247297 0.46624124642661 0.33559358 0.19272175 prediction 0.69816966494594 Functional Loss - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162560124 chr1:162560125 synonymous SNV . 0 22 hPsi_associated_SNPs_4000 0 0 1 0 1 Ribosome 0.438895510715343 0.441230034194887 0 0 hPsi_site_9417 iPseU_CNN:0;iRNA_PseU:0 9418 chr8 95862308 95862308 1 + A G BLCA 95862307 + 95862287 95862327 41 TTAAACCTGTAACTTCATTTTATGATATCCCAGGTTAGCTC TTAAACCTGTAACTTCATTTTGTGATATCCCAGGTTAGCTC < 41bp 0.875279654642156 0.526196923522502 0.44517872 0.33426744 prediction 0.698165462239308 Functional Loss - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95862307 chr8:95862308 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4001 0 0 1 0 1 Nucleus 0.438718827184185 0.438718821469813 0 0 hPsi_site_9418 iPseU_CNN:0;iRNA_PseU:0 9419 chr17 7557424 7557424 1 + A G UCEC 7557423 + 7557403 7557443 41 ATGTCTGCCGCCCTGGACGCTATTACGAACAGCCAGATAAT ATGTCTGCCGCCCTGGACGCTGTTACGAACAGCCAGATAAT < 41bp 0.849077565443824 0.444725435215023 0.15932354 0.13656524 prediction 0.698155130887647 Functional Loss - ATP1B2 ENSG00000129244 CDS Human protein_coding chr17:7557423 chr17:7557424 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4002 0 0 1 0 1 Nucleus 0.438732644515347 0.43834295734529 0 0 hPsi_site_9419 iPseU_CNN:0;iRNA_PseU:0 9420 chr15 23000117 23000117 1 + A G UCEC 23000116 + 23000096 23000136 41 GCAGTGCTTTGGTGATGGGCTACACTGGGCTGGCTGTATGA GCAGTGCTTTGGTGATGGGCTGCACTGGGCTGGCTGTATGA < 41bp 0.849075729076251 0.454538522398336 0.60913986 0.26964274 prediction 0.698151458152502 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:23000116 chr15:23000117 synonymous SNV . 0 22 hPsi_associated_SNPs_4003 0 0 1 0 1 Cytosol 0.438714952481806 0.438717461502636 0.21827972 0 hPsi_site_9420 iPseU_CNN:0.21827972;iRNA_PseU:0 9421 chr17 30321706 30321706 1 + A G BLCA 30321705 + 30321685 30321725 41 TTTAGTCGCAACGGACCAGTTAAGAGAACACCTATCACACA TTTAGTCGCAACGGACCAGTTGAGAGAACACCTATCACACA < 41bp 0.849071363603135 0.45821704830129 0.76726997 0.42242402 prediction 0.69814272720627 Functional Loss - SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30321705 chr17:30321706 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4004 0 0 1 0 1 Ribosome 0.440618817272912 0.440686809295221 0.53453994 0 hPsi_site_9421 iPseU_CNN:0.53453994;iRNA_PseU:0 9422 chr7 151046271 151046271 1 + A G SKCM 151046270 + 151046250 151046290 41 GTGGAACAGGAAATGACAATTATAGAACAACGGGAATTGCT GTGGAACAGGAAATGACAATTGTAGAACAACGGGAATTGCT < 41bp 0.875819527672451 0.526838836901881 0.5020696 0.34145856 prediction 0.697961381541141 Functional Loss - NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046270 chr7:151046271 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_4005 0 0 1 1 1 Ribosome 0.438718593134046 0.438718616897044 0.00413920000000001 0 hPsi_site_9422 iPseU_CNN:0.00413920000000001;iRNA_PseU:0 9423 chr11 33054958 33054958 1 + A G rs142956576 33054957 + 33054937 33054977 41 AAAAATTGCTAGGTCAATTCTATAAGTGTCACCCAGACATC AAAAATTGCTAGGTCAATTCTGTAAGTGTCACCCAGACATC < 41bp 0.848971310294621 0.47497457048964 0.25559294 0.15664777 prediction 0.697942620589242 Functional Loss - DEPDC7 ENSG00000121690 CDS Human protein_coding chr11:33054957 chr11:33054958 nonsynonymous SNV 0.141 5 22 hPsi_associated_SNPs_4006 0 0 0 0 0 Cytosol 0.438718707208332 0.438717976291211 0 0 hPsi_site_9423 iPseU_CNN:0;iRNA_PseU:0 9424 chr5 112228212 112228212 1 + T C rs61995949 112228213 - 112228193 112228233 41 TCCTGCATACCATCGTCCGTTAAACAGAGAAAGGGCTGCTT TCCTGCATACCATCGTCCGTTGAACAGAGAAAGGGCTGCTT < 41bp 0.871471290295794 0.522505243839634 0.65968835 0.26186132 prediction 0.69793209291232 Functional Loss - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112228213 chr5:112228212 synonymous SNV . 0 22 hPsi_associated_SNPs_4007 0 0 0 0 1 Ribosome 0.438730028009782 0.438697445685878 0.3193767 0 hPsi_site_9424 iPseU_CNN:0.3193767;iRNA_PseU:0 9425 chr17 7416456 7416456 1 + A G CESC 7416455 + 7416435 7416475 41 ACTTCACCCTCCTACTCCCCTACCTCTCCATCCTATTCTCC ACTTCACCCTCCTACTCCCCTGCCTCTCCATCCTATTCTCC < 41bp 0.848960264306063 0.474285684419077 0.6012852 0.29236916 prediction 0.697920528612125 Functional Loss - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7416455 chr17:7416456 nonsynonymous SNV 0.848 0 22 hPsi_associated_SNPs_4008 0 0 1 0 0 Nucleus 0.438718592995102 0.438718592995102 0.2025704 0 hPsi_site_9425 iPseU_CNN:0.2025704;iRNA_PseU:0 9426 chr10 135038213 135038213 1 + A G HNSC 135038212 + 135038192 135038232 41 ACGCGTTCCAGGAGAACCCTTACACCTTCAGCCCCGACCCC ACGCGTTCCAGGAGAACCCTTGCACCTTCAGCCCCGACCCC < 41bp 0.8835266922948 0.534596560683131 0.5690089 0.34430093 prediction 0.697860263223337 Functional Loss - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135038212 chr10:135038213 nonsynonymous SNV 0.920 4 22 hPsi_associated_SNPs_4009 0 0 0 0 1 Endoplasmic reticulum 0.438718533763678 0.438718487199381 0.1380178 0 hPsi_site_9426 iPseU_CNN:0.1380178;iRNA_PseU:0 9427 chr4 81967179 81967179 1 + A G LIHC 81967178 + 81967158 81967198 41 ATGTCCTGGCTGTCTAAAGATATCACTCAACTCTTGAGGAA ATGTCCTGGCTGTCTAAAGATGTCACTCAACTCTTGAGGAA < 41bp 0.848872626486676 0.456284122731313 0.23988143 0.20210871 prediction 0.697745252973353 Functional Loss - BMP3 ENSG00000152785 CDS Human protein_coding chr4:81967178 chr4:81967179 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_4010 0 0 0 0 0 Nucleus 0.438705658909093 0.43871885603021 0 0 hPsi_site_9427 iPseU_CNN:0;iRNA_PseU:0 9428 chr8 39780114 39780114 1 + A G SKCM 39780113 + 39780093 39780133 41 TTTCGTGATGGAGACTGCAGTAAAGGATTCTTCCTGGTCTC TTTCGTGATGGAGACTGCAGTGAAGGATTCTTCCTGGTCTC < 41bp 0.887483149429908 0.538613406771014 0.3250084 0.23157209 prediction 0.697739485317789 Functional Loss - IDO1 ENSG00000131203 CDS Human protein_coding chr8:39780113 chr8:39780114 nonsynonymous SNV 0.967 2 22 hPsi_associated_SNPs_4011 0 0 0 1 2 Cytosol 0.438718414190559 0.438718600605588 0 0 hPsi_site_9428 iPseU_CNN:0;iRNA_PseU:0 9429 chr6 39041502 39041502 1 + A C rs1042044 39041501 + 39041481 39041521 41 ACTGCTGGCCTTCTCGGTCTTATCTGAGCAATGGATCTTCA ACTGCTGGCCTTCTCGGTCTTCTCTGAGCAATGGATCTTCA < 41bp 0.864537491935684 0.515691611333791 0.36148623 0.2688564 prediction 0.697691761203786 Functional Loss - GLP1R ENSG00000112164 CDS Human protein_coding chr6:39041501 chr6:39041502 nonsynonymous SNV 0.481 0 22 hPsi_associated_SNPs_4012 0 0 0 0 1 unknown 0.438718372747249 0.438718320896019 0 0 hPsi_site_9429 iPseU_CNN:0;iRNA_PseU:0 9430 chr1 249211771 249211771 1 + A G UCEC 249211770 + 249211750 249211790 41 AGCTTGGATCTAGGAGGCAGTATGGTAATAAAATTTGTGGA AGCTTGGATCTAGGAGGCAGTGTGGTAATAAAATTTGTGGA < 41bp 0.848845602142011 0.451911028323651 0.21974412 0.17196092 prediction 0.697691204284022 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211770 chr1:249211771 nonsynonymous SNV 0.931 1 22 hPsi_associated_SNPs_4013 0 0 0 0 0 Cytosol 0.438718507082508 0.438718550536009 0 0 hPsi_site_9430 iPseU_CNN:0;iRNA_PseU:0 9431 chr11 11924337 11924337 1 + A G rs192093275 11924336 + 11924316 11924356 41 TCAAAGGCTTTTTGTTTTGTTACAAACCAGCAAAAAGAGAG TCAAAGGCTTTTTGTTTTGTTGCAAACCAGCAAAAAGAGAG < 41bp 0.848835617538587 0.464291378382237 0.6837622 0.25219613 prediction 0.697671235077174 Functional Loss - USP47 ENSG00000170242 CDS Human protein_coding chr11:11924336 chr11:11924337 synonymous SNV . 0 22 hPsi_associated_SNPs_4014 0 0 1 0 1 Nucleus 0.432631392621912 0.416226345248163 0.3675244 0 hPsi_site_9431 iPseU_CNN:0.3675244;iRNA_PseU:0 9432 chr16 21991888 21991888 1 + A G rs139312246 21991887 + 21991867 21991907 41 GGAACAAGCTGAAAGCTGGATACCTAATGTCAGTGGAGTCT GGAACAAGCTGAAAGCTGGATGCCTAATGTCAGTGGAGTCT < 41bp 0.848832966081055 0.477841907793185 0.49670026 0.19978172 prediction 0.69766593216211 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21991887 chr16:21991888 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_4015 0 0 1 0 1 Ribosome 0.438691935587681 0.438719041211193 0 0 hPsi_site_9432 iPseU_CNN:0;iRNA_PseU:0 9433 chrX 50659507 50659507 1 + A G STAD 50659506 + 50659486 50659526 41 CCCGGCCCTCCTGTGTCCCGTATAAGTATGTTCCAATTAGT CCCGGCCCTCCTGTGTCCCGTGTAAGTATGTTCCAATTAGT < 41bp 0.871602615334101 0.522785105827232 0.5906236 0.35065985 prediction 0.697635019013738 Functional Loss - BMP15 ENSG00000130385 CDS Human protein_coding chrX:50659506 chrX:50659507 nonsynonymous SNV 0.842 5 22 hPsi_associated_SNPs_4016 0 0 0 0 0 exosome 0.438538925670172 0.438926625048073 0.1812472 0 hPsi_site_9433 iPseU_CNN:0.1812472;iRNA_PseU:0 9434 chr15 22862986 22862986 1 + A G GBM 22862985 + 22862965 22863005 41 GAAGTTTGCTGGTGGTGATGTATGTGTGGATAGATCATCGG GAAGTTTGCTGGTGGTGATGTGTGTGTGGATAGATCATCGG < 41bp 0.848801527408127 0.452933001258345 0.34500757 0.30144304 prediction 0.697603054816254 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22862985 chr15:22862986 synonymous SNV . 0 22 hPsi_associated_SNPs_4017 0 0 1 0 1 chromatin 0.438721777434777 0.438730341939232 0 0 hPsi_site_9434 iPseU_CNN:0;iRNA_PseU:0 9435 chr8 143604056 143604056 1 + A G UCEC 143604055 + 143604035 143604075 41 GATTCACCAAGGCCAAAGGGTACAGCACCATGAACTAGTGA GATTCACCAAGGCCAAAGGGTGCAGCACCATGAACTAGTGA < 41bp 0.886524061395893 0.537746118631623 0.8245746 0.30833805 prediction 0.697555885528541 Functional Loss - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143604055 chr8:143604056 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4018 0 0 0 0 2 Nucleus 0.43871859299883 0.438718592995307 0.6491492 0 hPsi_site_9435 iPseU_CNN:0.6491492;iRNA_PseU:0 9436 chr4 151504369 151504369 1 + A G UCEC 151504368 + 151504348 151504388 41 TGAGCGAGATCGATGCCCGCTACGAGGGGCTCGAGGTCATT TGAGCGAGATCGATGCCCGCTGCGAGGGGCTCGAGGTCATT < 41bp 0.848749871332433 0.470750027726635 0.8189944 0.22695786 prediction 0.697499742664865 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504368 chr4:151504369 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4019 0 0 0 0 0 nucleus 0.429892319812893 0.438684400774826 0.6379888 0 hPsi_site_9436 iPseU_CNN:0.6379888;iRNA_PseU:0 9437 chr12 72425339 72425339 1 + A G SARC 72425338 + 72425318 72425358 41 TTACCCGTCCCTTCTCAGTATACTTCAATCCCTACACACAG TTACCCGTCCCTTCTCAGTATGCTTCAATCCCTACACACAG < 41bp 0.848745118245935 0.47301968237426 0.7465044 0.3355651 prediction 0.69749023649187 Functional Loss - TPH2 ENSG00000139287 CDS Human protein_coding chr12:72425338 chr12:72425339 nonsynonymous SNV 0.890 3 22 hPsi_associated_SNPs_4020 0 0 0 0 1 exosome 0.438888125944976 0.438718524899477 0.4930088 0 hPsi_site_9437 iPseU_CNN:0.4930088;iRNA_PseU:0 9438 chr10 50819135 50819135 1 + A G UCEC 50819134 + 50819114 50819154 41 GCCCTTCGGCCCCGCTACCCTACGGAGAGCGAAGACGTGAA GCCCTTCGGCCCCGCTACCCTGCGGAGAGCGAAGACGTGAA < 41bp 0.848719693308955 0.472651889679558 0.40870222 0.23729649 prediction 0.69743938661791 Functional Loss - SLC18A3 ENSG00000187714 CDS Human protein_coding chr10:50819134 chr10:50819135 nonsynonymous SNV 0.958 0 22 hPsi_associated_SNPs_4021 0 0 0 0 0 exosome 0.438718763067013 0.438718907624581 0 0 hPsi_site_9438 iPseU_CNN:0;iRNA_PseU:0 9439 chr2 97428070 97428070 1 + A G LIHC 97428069 + 97428049 97428089 41 TCAAGACTATCACTCGCTTCTATAACCACCCGGTGCACTTT TCAAGACTATCACTCGCTTCTGTAACCACCCGGTGCACTTT < 41bp 0.875094452052922 0.526376443694707 0.374413 0.27242202 prediction 0.69743601671643 Functional Loss - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97428069 chr2:97428070 nonsynonymous SNV 0.985 5 22 hPsi_associated_SNPs_4022 0 0 1 0 0 chromatin 0.43871858469468 0.43871830755309 0 0 hPsi_site_9439 iPseU_CNN:0;iRNA_PseU:0 9440 chr22 21416598 21416598 1 + A G rs558401319 21416597 + 21416577 21416617 41 GTGCGACTCTATGAATACGCTAAAAACCGCTCGATTGTACA GTGCGACTCTATGAATACGCTGAAAACCGCTCGATTGTACA < 41bp 0.848711729106514 0.495725841070304 0.5305342 0.21560845 prediction 0.697423458213027 Functional Loss - LRRC74B ENSG00000187905 UTR3 Human protein_coding chr22:21416597 chr22:21416598 . . 0 22 hPsi_associated_SNPs_4023 0 0 0 0 0 exosome 0.438735657175474 0.4382198224791 0.0610683999999999 0 hPsi_site_9440 iPseU_CNN:0.0610683999999999;iRNA_PseU:0 9441 chr7 87436730 87436730 1 + A G UCEC 87436729 + 87436709 87436749 41 TTTAAGATCGAGACAAGAGTTAACTGCCCATCTCACCAACC TTTAAGATCGAGACAAGAGTTGACTGCCCATCTCACCAACC < 41bp 0.848710946954154 0.470081948511553 0.77202773 0.3680991 prediction 0.697421893908308 Functional Loss - RUNDC3B ENSG00000105784 CDS Human protein_coding chr7:87436729 chr7:87436730 synonymous SNV . 0 22 hPsi_associated_SNPs_4024 0 0 0 0 2 chromatin 0.438845382356934 0.438716543225946 0.54405546 0 hPsi_site_9441 iPseU_CNN:0.54405546;iRNA_PseU:0 9442 chr17 38033007 38033007 1 + A G PAAD 38033006 + 38032986 38033026 41 CCTGCGTTTCCGTCCTTACCTATGGAGCTAAATCTTGCCCA CCTGCGTTTCCGTCCTTACCTGTGGAGCTAAATCTTGCCCA < 41bp 0.848670421392626 0.479625299724147 0.4112686 0.3090269 prediction 0.697340842785252 Functional Loss - ZPBP2 ENSG00000186075 CDS Human protein_coding chr17:38033006 chr17:38033007 nonsynonymous SNV 0.245 4 22 hPsi_associated_SNPs_4025 0 0 0 0 1 exosome 0.438718592984908 0.438718592994172 0 0 hPsi_site_9442 iPseU_CNN:0;iRNA_PseU:0 9443 chr2 28521316 28521316 1 + A G CESC 28521315 + 28521295 28521335 41 AGGCCCAAAAAAATTATCCGTACAGCCCCAGATGGGATGGA AGGCCCAAAAAAATTATCCGTGCAGCCCCAGATGGGATGGA < 41bp 0.870666037834582 0.522006663459607 0.83679813 0.577692 prediction 0.697318748749951 Functional Loss - BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521315 chr2:28521316 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_4026 0 0 1 1 1 Nucleus 0.438718592992324 0.438718592994886 0.51821226 0 hPsi_site_9443 iPseU_CNN:0.51821226;iRNA_PseU:0 9444 chr5 175110781 175110781 1 + A G UCEC 175110780 + 175110760 175110800 41 AAGTCCAGGTCAATGAAGTGTACGGGCTGGTGGATGGGCTG AAGTCCAGGTCAATGAAGTGTGCGGGCTGGTGGATGGGCTG < 41bp 0.881306456183065 0.532650943962567 0.37232035 0.20326567 prediction 0.697311024440997 Functional Loss - HRH2 ENSG00000113749 CDS Human protein_coding chr5:175110780 chr5:175110781 nonsynonymous SNV 0.903 4 22 hPsi_associated_SNPs_4027 0 0 0 0 0 nucleus 0.437896159028176 0.431132650517749 0 0 hPsi_site_9444 iPseU_CNN:0;iRNA_PseU:0 9445 chr2 95713828 95713828 1 + A G PCPG 95713827 + 95713807 95713847 41 CCACCACCTTGATCATCCTGTACATAATTGGAGCCCACGGT CCACCACCTTGATCATCCTGTGCATAATTGGAGCCCACGGT < 41bp 0.888576358600589 0.53992354270781 0.5464508 0.21940541 prediction 0.697305631785558 Functional Loss - MAL ENSG00000172005 CDS Human protein_coding chr2:95713827 chr2:95713828 nonsynonymous SNV 0.975 4 22 hPsi_associated_SNPs_4028 0 0 0 0 1 exosome 0.4387186274885 0.43871859313448 0.0929016 0 hPsi_site_9445 iPseU_CNN:0.0929016;iRNA_PseU:0 9446 chr6 33219407 33219407 1 + A G UCEC 33219406 + 33219386 33219426 41 AAGCCACGGATCAGCTGAGTTACCCGGGCTAATAGCAGGAG AAGCCACGGATCAGCTGAGTTGCCCGGGCTAATAGCAGGAG < 41bp 0.848649230871505 0.468191077141203 0.4104663 0.16509041 prediction 0.69729846174301 Functional Loss - VPS52 ENSG00000223501 CDS Human protein_coding chr6:33219406 chr6:33219407 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_4029 0 0 0 0 1 Ribosome 0.438721222525999 0.438718350617903 0 0 hPsi_site_9446 iPseU_CNN:0;iRNA_PseU:0 9447 chr7 26225027 26225027 1 + A G rs573952781 26225026 + 26225006 26225046 41 ATAGCATGTTAAGTAGATATTATCTGACAGACCTACAAGTC ATAGCATGTTAAGTAGATATTGTCTGACAGACCTACAAGTC < 41bp 0.848648126137061 0.472198316423134 0.70865107 0.36609036 prediction 0.697296252274121 Functional Loss - NFE2L3 ENSG00000050344 CDS Human protein_coding chr7:26225026 chr7:26225027 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_4030 0 0 0 0 0 Ribosome 0.438708666179318 0.438755897744222 0.41730214 0 hPsi_site_9447 iPseU_CNN:0.41730214;iRNA_PseU:0 9448 chr5 72865397 72865397 1 + A G UCEC 72865396 + 72865376 72865416 41 TGATGATTATACAGTTAAATTATGGGATATTCCAAACTCCA TGATGATTATACAGTTAAATTGTGGGATATTCCAAACTCCA < 41bp 0.848645943627804 0.477081848841495 0.3104558 0.30276418 prediction 0.697291887255609 Functional Loss - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72865396 chr5:72865397 synonymous SNV . 0 22 hPsi_associated_SNPs_4031 0 0 1 0 1 Ribosome 0.438721785568287 0.438712145761138 0 0 hPsi_site_9448 iPseU_CNN:0;iRNA_PseU:0 9449 chr1 169798464 169798464 1 + A G UCEC 169798463 + 169798443 169798483 41 GTGTTCTGGTGAACTCTCTCTACCTGTTCATTTACAGGGAT GTGTTCTGGTGAACTCTCTCTGCCTGTTCATTTACAGGGAT < 41bp 0.848618758329258 0.470829747551672 0.6517547 0.2134547 prediction 0.697237516658515 Functional Loss - C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169798463 chr1:169798464 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4032 0 0 0 0 1 Nucleus 0.434554431996717 0.434766765565361 0.3035094 0 hPsi_site_9449 iPseU_CNN:0.3035094;iRNA_PseU:0 9450 chr1 32568177 32568177 1 + A G LUSC 32568176 + 32568156 32568196 41 TCATCCTCTTCAGCAACTACTATGCCTTCTTCAAGCTGCTC TCATCCTCTTCAGCAACTACTGTGCCTTCTTCAAGCTGCTC < 41bp 0.872732910148104 0.524123574213239 0.7997428 0.512329 prediction 0.697218671869729 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32568176 chr1:32568177 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4033 0 0 1 0 0 chromatin 0.43872450255814 0.438771914656402 0.5748276 0 hPsi_site_9450 iPseU_CNN:0.5748276;iRNA_PseU:0 9451 chr1 47904295 47904295 1 + A G THCA 47904294 + 47904274 47904314 41 TCATCAGCGGCCGCTTCCCCTACTACCGGGAGAAGTTCCCC TCATCAGCGGCCGCTTCCCCTGCTACCGGGAGAAGTTCCCC < 41bp 0.870060826671826 0.52148081014844 0.25250828 0.20054829 prediction 0.697160033046772 Functional Loss - FOXD2 ENSG00000186564 CDS Human protein_coding chr1:47904294 chr1:47904295 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4034 0 0 0 0 0 chromatin 0.438718590547324 0.438718592989867 0 0 hPsi_site_9451 iPseU_CNN:0;iRNA_PseU:0 9452 chr4 38696483 38696483 1 + A G THYM 38696482 + 38696462 38696502 41 ATGATGGATGCAACAAAGTGTACACTAAAAGCTCCCACTTG ATGATGGATGCAACAAAGTGTGCACTAAAAGCTCCCACTTG < 41bp 0.882441588178227 0.53388182841573 0.5853301 0.2781559 prediction 0.697119519524994 Functional Loss - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38696482 chr4:38696483 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4035 0 0 0 0 1 Cytosol 0.439243190429991 0.438856967941907 0.1706602 0 hPsi_site_9452 iPseU_CNN:0.1706602;iRNA_PseU:0 9453 chr17 2577462 2577462 1 + A G rs150380620 2577461 + 2577441 2577481 41 CAATGACCAGACTGTGCGTGTATGGGTCGTAGCAACAAAGG CAATGACCAGACTGTGCGTGTGTGGGTCGTAGCAACAAAGG < 41bp 0.848555740559882 0.444684999763011 0.6416571 0.33097237 prediction 0.697111481119763 Functional Loss - PAFAH1B1 ENSG00000007168 CDS Human protein_coding chr17:2577461 chr17:2577462 synonymous SNV . 0 22 hPsi_associated_SNPs_4036 3 0 1 0 0 Ribosome 0.438718078720288 0.43871820654963 0.2833142 0 hPsi_site_9453 iPseU_CNN:0.2833142;iRNA_PseU:0 9454 chr1 155106550 155106550 1 + A G rs9297 155106549 + 155106529 155106569 41 CTGCAAACCCCGTGAAGGTGTATGCCACACCTGGCCTTAAA CTGCAAACCCCGTGAAGGTGTGTGCCACACCTGGCCTTAAA < 41bp 0.848544110692177 0.479924885089 0.42089027 0.35440958 prediction 0.697088221384354 Functional Loss - EFNA1 ENSG00000169242 UTR3 Human protein_coding chr1:155106549 chr1:155106550 . . 0 22 hPsi_associated_SNPs_4037 0 0 1 1 0 Endoplasmic reticulum 0.438745827914472 0.440491780241788 0 0 hPsi_site_9454 iPseU_CNN:0;iRNA_PseU:0 9455 chr9 108145472 108145472 1 + A G rs575344705 108145471 + 108145451 108145491 41 CTACCAGCAGGACTACACAGTATGGGTGCTGCCTCTGATCA CTACCAGCAGGACTACACAGTGTGGGTGCTGCCTCTGATCA < 41bp 0.848519241555953 0.453263564005121 0.7231183 0.39076117 prediction 0.697038483111907 Functional Loss - SLC44A1 ENSG00000070214 CDS Human protein_coding chr9:108145471 chr9:108145472 synonymous SNV . 0 22 hPsi_associated_SNPs_4038 0 0 1 0 1 Endoplasmic reticulum 0.439219684000944 0.441068046579765 0.4462366 0 hPsi_site_9455 iPseU_CNN:0.4462366;iRNA_PseU:0 9456 chr8 16885031 16885031 1 + A G rs181771849 16885030 + 16885010 16885050 41 CGGGGGGCTGGTCGGCCTGGTATGCTACCAGCTGTACGGGG CGGGGGGCTGGTCGGCCTGGTGTGCTACCAGCTGTACGGGG < 41bp 0.848512972062745 0.485049728349366 0.7711539 0.40376413 prediction 0.697025944125489 Functional Loss - MICU3 ENSG00000155970 CDS Human protein_coding chr8:16885030 chr8:16885031 synonymous SNV . 0 22 hPsi_associated_SNPs_4039 0 0 0 0 0 cytosol 0.438720965294348 0.438707078995715 0.5423078 0 hPsi_site_9456 iPseU_CNN:0.5423078;iRNA_PseU:0 9457 chr5 176730775 176730775 1 + A G rs6879874 176730774 + 176730754 176730794 41 CGGGCGCCGGAAGCGGTGGCTACTGTGTGGCTGCGCCGGAA CGGGCGCCGGAAGCGGTGGCTGCTGTGTGGCTGCGCCGGAA < 41bp 0.848484883714538 0.475043891286128 0.7064554 0.3670689 prediction 0.696969767429076 Functional Loss - PRELID1 ENSG00000169230 UTR5 Human protein_coding chr5:176730774 chr5:176730775 . . 0 22 hPsi_associated_SNPs_4040 0 0 1 0 0 Cytosol 0.438647704133942 0.438716415863659 0.4129108 0 hPsi_site_9457 iPseU_CNN:0.4129108;iRNA_PseU:0 9458 chr9 132890995 132890995 1 + A G LIHC 132890994 + 132890974 132891014 41 GTCCGGCTTCAGATAACCCCTACCTACAACTTTCTCAGGAA GTCCGGCTTCAGATAACCCCTGCCTACAACTTTCTCAGGAA < 41bp 0.848364118344591 0.455928913080562 0.6669536 0.21752575 prediction 0.696728236689182 Functional Loss - GPR107 ENSG00000148358 CDS Human protein_coding chr9:132890994 chr9:132890995 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4041 0 0 1 2 2 Ribosome 0.438718597317412 0.438718585224675 0.3339072 0 hPsi_site_9458 iPseU_CNN:0.3339072;iRNA_PseU:0 9459 chr11 62475153 62475153 1 + A G rs548600576 62475152 + 62475132 62475172 41 AGGATCTGAGCAGCTCCTTCTAGCATCCTTCATCCTTCAGG AGGATCTGAGCAGCTCCTTCTGGCATCCTTCATCCTTCAGG < 41bp 0.848353764513677 0.48272625511885 0.50999206 0.25389153 prediction 0.696707529027354 Functional Loss - HNRNPUL2-BSCL2 ENSG00000162188 UTR5 Human protein_coding chr11:62475152 chr11:62475153 . . 0 22 hPsi_associated_SNPs_4042 0 0 0 0 0 exosome 0.438736550839261 0.438705538742826 0.0199841199999999 0 hPsi_site_9459 iPseU_CNN:0.0199841199999999;iRNA_PseU:0 9460 chr7 94166868 94166868 1 + A G LUAD 94166867 + 94166847 94166887 41 TGTCAACCTCGGCCTCCTGTTACTCTCATACAGAAGCTAGC TGTCAACCTCGGCCTCCTGTTGCTCTCATACAGAAGCTAGC < 41bp 0.848352159272244 0.451478762745885 0.7130307 0.2270379 prediction 0.696704318544488 Functional Loss - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94166867 chr7:94166868 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_4043 0 0 1 1 1 Cytosol 0.438718584251255 0.4387185929976 0.4260614 0 hPsi_site_9460 iPseU_CNN:0.4260614;iRNA_PseU:0 9461 chr13 113907430 113907430 1 + A G COAD 113907429 + 113907409 113907449 41 AGGAAGTATTTAAGGCATTTTATCTTGGAAAGCACAGTGGT AGGAAGTATTTAAGGCATTTTGTCTTGGAAAGCACAGTGGT < 41bp 0.848328302286243 0.455008391000478 0.33256358 0.27027714 prediction 0.696656604572485 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113907429 chr13:113907430 nonsynonymous SNV 0.987 5 22 hPsi_associated_SNPs_4044 0 0 1 0 2 Cytosol 0.438654539221077 0.43863027007294 0 0 hPsi_site_9461 iPseU_CNN:0;iRNA_PseU:0 9462 chr20 10280025 10280025 1 + A G UCEC 10280024 + 10280004 10280044 41 GATATGGGCAATGAGATCGATACACAGAATCGCCAGATCGA GATATGGGCAATGAGATCGATGCACAGAATCGCCAGATCGA < 41bp 0.848320699852409 0.452309748185186 0.71091646 0.31176683 prediction 0.696641399704819 Functional Loss - SNAP25 ENSG00000132639 CDS Human protein_coding chr20:10280024 chr20:10280025 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4045 0 0 1 0 1 Cytosol 0.438647420777095 0.438730594671996 0.42183292 0 hPsi_site_9462 iPseU_CNN:0.42183292;iRNA_PseU:0 9463 chr12 9462540 9462540 1 + A G rs189596245 9462539 + 9462519 9462559 41 ATGACGCCGTGGCCTTGGTCTACAGGTGTCTGACTTCCGGC ATGACGCCGTGGCCTTGGTCTGCAGGTGTCTGACTTCCGGC < 41bp 0.885906212314365 0.537592372234278 0.537473 0.34012634 prediction 0.696627680160174 Functional Loss - LOC642846 ENSG00000111788 ncRNA_intronic Human unprocessed_pseudogene chr12:9462539 chr12:9462540 . . 0 22 hPsi_associated_SNPs_4046 0 0 0 0 2 unknown 0.438718694168175 0.438718580541734 0.074946 0 hPsi_site_9463 iPseU_CNN:0.074946;iRNA_PseU:0 9464 chr17 904399 904399 1 + A G rs544493456 904398 + 904378 904418 41 TCTCTGGAGGACAGTTTCTGTACCACACCAGGGCCTTGCTT TCTCTGGAGGACAGTTTCTGTGCCACACCAGGGCCTTGCTT < 41bp 0.848307957654972 0.486444090706758 0.7513622 0.4626738 prediction 0.696615915309944 Functional Loss - TIMM22 ENSG00000177370 UTR3 Human protein_coding chr17:904398 chr17:904399 . . 0 22 hPsi_associated_SNPs_4047 0 0 1 0 0 Cytosol 0.438696166186924 0.438718593513038 0.5027244 0 hPsi_site_9464 iPseU_CNN:0.5027244;iRNA_PseU:0 9465 chr19 44778181 44778181 1 + A G rs201818973 44778180 + 44778160 44778200 41 GAAACCATATAAATGTGAGGTATGTGATAAGGGCTTCAGTA GAAACCATATAAATGTGAGGTGTGTGATAAGGGCTTCAGTA < 41bp 0.880363238888475 0.532078066743438 0.56735927 0.38972375 prediction 0.696570344290075 Functional Loss - ZNF233 ENSG00000159915 CDS Human protein_coding chr19:44778180 chr19:44778181 synonymous SNV . 0 22 hPsi_associated_SNPs_4048 0 0 1 0 0 chromatin 0.438718588098735 0.438718644032476 0.13471854 0 hPsi_site_9465 iPseU_CNN:0.13471854;iRNA_PseU:0 9466 chrX 2947377 2947377 1 + A G LUSC 2947376 + 2947356 2947396 41 TCTTCCACTACTGTGGGGTCTATCTGCACACGGTCAGGTGG TCTTCCACTACTGTGGGGTCTGTCTGCACACGGTCAGGTGG < 41bp 0.848283867409054 0.450732028821579 0.3870226 0.30035254 prediction 0.696567734818107 Functional Loss - ARSH ENSG00000205667 CDS Human protein_coding chrX:2947376 chrX:2947377 nonsynonymous SNV 0.062 3 22 hPsi_associated_SNPs_4049 0 0 0 0 1 exosome 0.438715112745302 0.438690510295836 0 0 hPsi_site_9466 iPseU_CNN:0;iRNA_PseU:0 9467 chr1 120056459 120056459 1 + A G LGG 120056458 + 120056438 120056478 41 ATATGCTCTTCATGGACAGGTACCCAGCTCCTGTTAGAGGC ATATGCTCTTCATGGACAGGTGCCCAGCTCCTGTTAGAGGC < 41bp 0.84826673685798 0.472485529466125 0.5971048 0.21939579 prediction 0.696533473715961 Functional Loss - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120056458 chr1:120056459 nonsynonymous SNV 0.767 3 22 hPsi_associated_SNPs_4050 0 0 0 0 1 exosome 0.438704168669284 0.438722775041658 0.1942096 0 hPsi_site_9467 iPseU_CNN:0.1942096;iRNA_PseU:0 9468 chr1 155912356 155912356 1 + A G SKCM 155912355 + 155912335 155912375 41 TGGAACAGTACTTTCTATACTATCCAGACGTATGTCTTCCC TGGAACAGTACTTTCTATACTGTCCAGACGTATGTCTTCCC < 41bp 0.848256332983666 0.486130849271717 0.6816274 0.30799276 prediction 0.696512665967332 Functional Loss - RXFP4 ENSG00000173080 CDS Human protein_coding chr1:155912355 chr1:155912356 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_4051 0 0 0 0 0 exosome 0.438693796148463 0.438746109759028 0.3632548 0 hPsi_site_9468 iPseU_CNN:0.3632548;iRNA_PseU:0 9469 chr19 57868268 57868268 1 + A G HNSC 57868267 + 57868247 57868287 41 GCAGTGAATGTGGAAAAGCCTACAGCAGAAGCTCCCACCTT GCAGTGAATGTGGAAAAGCCTGCAGCAGAAGCTCCCACCTT < 41bp 0.888038277075742 0.539962480373604 0.5467574 0.47687918 prediction 0.696151593404276 Functional Loss - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57868267 chr19:57868268 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4052 0 0 0 0 0 chromatin 0.438697213873738 0.438718475958149 0.0935147999999999 0 hPsi_site_9469 iPseU_CNN:0.0935147999999999;iRNA_PseU:0 9470 chr7 148947279 148947279 1 + A G rs11769362 148947278 + 148947258 148947298 41 AAAACGACGCTCCACACCTTTAACTTCTTCCACACTTCCTT AAAACGACGCTCCACACCTTTGACTTCTTCCACACTTCCTT < 41bp 0.889094094571965 0.541058372769625 0.3226602 0.25127184 prediction 0.696071443604679 Functional Loss - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148947278 chr7:148947279 synonymous SNV . 0 22 hPsi_associated_SNPs_4053 0 0 1 0 1 Cytosol 0.438718592995102 0.438719563193622 0 0 hPsi_site_9470 iPseU_CNN:0;iRNA_PseU:0 9471 chr16 48337117 48337117 1 + A G LUSC 48337116 + 48337096 48337136 41 GCAGGGGTTCGTTCTCTGGATAGAAAACTTGGGGCCATTTG GCAGGGGTTCGTTCTCTGGATGGAAAACTTGGGGCCATTTG < 41bp 0.848023374056969 0.454647690580724 0.40824592 0.2810653 prediction 0.696046748113938 Functional Loss - LONP2 ENSG00000102910 CDS Human protein_coding chr16:48337116 chr16:48337117 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_4054 0 0 1 0 2 Nucleus 0.439670659205079 0.438715140322305 0 0 hPsi_site_9471 iPseU_CNN:0;iRNA_PseU:0 9472 chr1 212798336 212798336 1 + A G rs149508727 212798335 + 212798315 212798355 41 GTACAAGGGGGAGTACGATATATTCAAGTATGCACCGATAT GTACAAGGGGGAGTACGATATGTTCAAGTATGCACCGATAT < 41bp 0.847919996982783 0.471794854755634 0.7011299 0.44000426 prediction 0.695839993965566 Functional Loss - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798335 chr1:212798336 nonsynonymous SNV 0.955 0 22 hPsi_associated_SNPs_4055 0 0 0 0 0 exosome 0.437239546302549 0.438596161808641 0.4022598 0 hPsi_site_9472 iPseU_CNN:0.4022598;iRNA_PseU:0 9473 chr17 21319667 21319667 1 + A G rs145451008 21319666 + 21319646 21319686 41 TCTTCGAGGAGAAGAACCAGTACAAGATTGACTACTCGCAC TCTTCGAGGAGAAGAACCAGTGCAAGATTGACTACTCGCAC < 41bp 0.847909585937084 0.457633663819708 0.81523216 0.62792414 prediction 0.695819171874168 Functional Loss - KCNJ12;KCNJ18 ENSG00000184185 CDS Human protein_coding chr17:21319666 chr17:21319667 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_4056 0 0 1 0 0 unknown 0.438718843442642 0.438718596249146 0.37461604 0 hPsi_site_9473 iPseU_CNN:0.37461604;iRNA_PseU:0 9474 chr16 3349590 3349590 1 + T C LUAD 3349591 - 3349571 3349611 41 TCTTGAGCTGCAAACGGCTGTATAGATGGAAGCAACTTGAA TCTTGAGCTGCAAACGGCTGTGTAGATGGAAGCAACTTGAA < 41bp 0.872807817530841 0.524926910294843 0.32630187 0.24042872 prediction 0.695761814471995 Functional Loss - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3349591 chr16:3349590 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_4057 0 0 1 0 0 exosome 0.438720602158469 0.438756657997226 0 0 hPsi_site_9474 iPseU_CNN:0;iRNA_PseU:0 9475 chr22 19119502 19119502 1 + A G rs56279111 19119501 + 19119481 19119521 41 TCCCCTACCAGCCCAAGGTGTATGACATCTGGAGCCTGGGC TCCCCTACCAGCCCAAGGTGTGTGACATCTGGAGCCTGGGC < 41bp 0.847879311136031 0.451619262305729 0.32496607 0.27874398 prediction 0.695758622272062 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119501 chr22:19119502 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_4058 0 0 0 0 0 exosome 0.438718838345427 0.438736310976358 0 0 hPsi_site_9475 iPseU_CNN:0;iRNA_PseU:0 9476 chr2 190728574 190728574 1 + A G LUAD 190728573 + 190728553 190728593 41 AAAAGATGGCAGAAAAAAGATAAAACCCACCAGCGCATGGA AAAAGATGGCAGAAAAAAGATGAAACCCACCAGCGCATGGA < 41bp 0.86321195896062 0.515365700229618 0.66412175 0.31729817 prediction 0.695692517462004 Functional Loss - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190728573 chr2:190728574 nonsynonymous SNV 0.889 0 22 hPsi_associated_SNPs_4059 0 0 1 1 0 Nucleus 0.438718686652296 0.438718692705065 0.3282435 0 hPsi_site_9476 iPseU_CNN:0.3282435;iRNA_PseU:0 9477 chr13 114164584 114164584 1 + A G LUAD 114164583 + 114164563 114164603 41 TTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATT TTTCCTTACAAGGGCCGTGTTGCATGACACTGTTAATGATT < 41bp 0.847836275733427 0.451551392142429 0.32752427 0.16275513 prediction 0.695672551466854 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114164583 chr13:114164584 nonsynonymous SNV 0.075 1 22 hPsi_associated_SNPs_4060 0 0 1 0 1 Ribosome 0.438718677610206 0.438717535684713 0 0 hPsi_site_9477 iPseU_CNN:0;iRNA_PseU:0 9478 chr8 17402056 17402056 1 + A G UCEC 17402055 + 17402035 17402075 41 GGACATACTTCAGAATGAATTACACTGGTCTTGCAGAATAT GGACATACTTCAGAATGAATTGCACTGGTCTTGCAGAATAT < 41bp 0.847827111051062 0.461612956196824 0.39466912 0.31241155 prediction 0.695654222102124 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17402055 chr8:17402056 nonsynonymous SNV 0.657 1 22 hPsi_associated_SNPs_4061 0 0 1 0 2 Ribosome 0.440424428744162 0.438538374983443 0 0 hPsi_site_9478 iPseU_CNN:0;iRNA_PseU:0 9479 chr22 41368482 41368482 1 + A G KICH 41368481 + 41368461 41368501 41 AATTTACTTTGTCTTTCAGGTATGGGCACTAGGAAAAGACT AATTTACTTTGTCTTTCAGGTGTGGGCACTAGGAAAAGACT < 41bp 0.847796470617445 0.498030484439475 0.58755744 0.24900505 prediction 0.69559294123489 Functional Loss - RBX1 ENSG00000100387 CDS Human protein_coding chr22:41368481 chr22:41368482 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_4062 0 0 1 0 1 Ribosome 0.438718512156747 0.438718581123551 0.17511488 0 hPsi_site_9479 iPseU_CNN:0.17511488;iRNA_PseU:0 9480 chr22 21800725 21800725 1 + A G UCEC 21800724 + 21800704 21800744 41 GTTCGGTCTGCGAGAAGACCTACAAGGACCCAGCCACGCTG GTTCGGTCTGCGAGAAGACCTGCAAGGACCCAGCCACGCTG < 41bp 0.879362701627428 0.531567081701231 0.63429946 0.31383115 prediction 0.695591239852394 Functional Loss - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800724 chr22:21800725 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4063 0 0 1 0 0 chromatin 0.438718672490636 0.438718561598837 0.26859892 0 hPsi_site_9480 iPseU_CNN:0.26859892;iRNA_PseU:0 9481 chr11 55579516 55579516 1 + A G BLCA 55579515 + 55579495 55579535 41 TTAAGTCTTGCTTGCTCTGATATCACTGTGAATGAGACACT TTAAGTCTTGCTTGCTCTGATGTCACTGTGAATGAGACACT < 41bp 0.860154274138364 0.512372628460568 0.234676 0.18706945 prediction 0.695563291355591 Functional Loss - OR5L1 ENSG00000186117 CDS Human other chr11:55579515 chr11:55579516 nonsynonymous SNV 0.489 0 22 hPsi_associated_SNPs_4064 0 0 0 0 0 unknown 0.438622517609991 0.437909302929867 0 0 hPsi_site_9481 iPseU_CNN:0;iRNA_PseU:0 9482 chr19 17881656 17881656 1 + A G UCEC 17881655 + 17881635 17881675 41 TGCGGCGCTCAGTGGAAAAATACAACTCAGCCCGAGCTGAC TGCGGCGCTCAGTGGAAAAATGCAACTCAGCCCGAGCTGAC < 41bp 0.847779536034532 0.441871281542686 0.35775146 0.24611914 prediction 0.695559072069065 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17881655 chr19:17881656 nonsynonymous SNV 0.934 3 22 hPsi_associated_SNPs_4065 0 0 1 0 2 Cytosol 0.438631443650196 0.438749782073396 0 0 hPsi_site_9482 iPseU_CNN:0;iRNA_PseU:0 9483 chr3 14860772 14860772 1 + A G COAD 14860771 + 14860751 14860791 41 AGTCGGAGACCGACGAGGATTACATCGTGGTCCCCAGGGTT AGTCGGAGACCGACGAGGATTGCATCGTGGTCCCCAGGGTT < 41bp 0.847748945541773 0.459399397726275 0.8702371 0.7022551 prediction 0.695497891083547 Functional Loss - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14860771 chr3:14860772 nonsynonymous SNV 0.295 3 22 hPsi_associated_SNPs_4066 0 0 0 0 0 Cytosol 0.438682464395415 0.438706889419375 0.335964 0 hPsi_site_9483 iPseU_CNN:0.335964;iRNA_PseU:0 9484 chr1 155258298 155258298 1 + A G rs377291996 155258297 + 155258277 155258317 41 TAGTTCTTGGGGTGCAGTAGTATGTACCCAAGGGCAGATGC TAGTTCTTGGGGTGCAGTAGTGTGTACCCAAGGGCAGATGC < 41bp 0.847720924760549 0.479817516822798 0.27864498 0.25135618 prediction 0.695441849521097 Functional Loss - HCN3 ENSG00000143630 UTR3 Human protein_coding chr1:155258297 chr1:155258298 . . 0 22 hPsi_associated_SNPs_4067 0 0 1 0 0 chromatin 0.438718587853593 0.438718588220464 0 0 hPsi_site_9484 iPseU_CNN:0;iRNA_PseU:0 9485 chr19 19221799 19221799 1 + A G rs73922805 19221798 + 19221778 19221818 41 AGGAGGCACATGGGGCGCTTTATGGAACGAGCAGGTGGGCC AGGAGGCACATGGGGCGCTTTGTGGAACGAGCAGGTGGGCC < 41bp 0.847697510821222 0.479703686288165 0.2776968 0.2246331 prediction 0.695395021642445 Functional Loss - SLC25A42 ENSG00000181035 UTR3 Human protein_coding chr19:19221798 chr19:19221799 . . 0 22 hPsi_associated_SNPs_4068 0 0 1 0 0 Endoplasmic reticulum 0.4387183978987 0.438718582589058 0 0 hPsi_site_9485 iPseU_CNN:0;iRNA_PseU:0 9486 chr9 98231368 98231368 1 + A G READ 98231367 + 98231347 98231387 41 TGTAGGGAGGTGGGGGGCTGTAGCGGGTATTGTCGTGTGTG TGTAGGGAGGTGGGGGGCTGTGGCGGGTATTGTCGTGTGTG < 41bp 0.847689794784207 0.455165607344243 0.7071756 0.19709772 prediction 0.695379589568413 Functional Loss - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98231367 chr9:98231368 nonsynonymous SNV 0.842 2 22 hPsi_associated_SNPs_4069 0 0 0 0 0 Endoplasmic reticulum 0.438718593273666 0.43871859294608 0.4143512 0 hPsi_site_9486 iPseU_CNN:0.4143512;iRNA_PseU:0 9487 chr6 30590651 30590651 1 + A G rs562692800 30590650 + 30590630 30590670 41 TTTGTCTGCGCCCACACGGGTATCATCTTCTATGCTCCATA TTTGTCTGCGCCCACACGGGTGTCATCTTCTATGCTCCATA < 41bp 0.847683412942461 0.478118480342937 0.66116655 0.39926895 prediction 0.695366825884921 Functional Loss - MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30590650 chr6:30590651 nonsynonymous SNV 0.766 0 22 hPsi_associated_SNPs_4070 0 0 1 0 2 Cytosol 0.438718021702631 0.438718053301724 0.3223331 0 hPsi_site_9487 iPseU_CNN:0.3223331;iRNA_PseU:0 9488 chr8 104438333 104438333 1 + A G rs185916745 104438332 + 104438312 104438352 41 GGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCCA GGAAAATGGATGGGCCAGGCTGTGGAGACGAGGAAGAGCCA < 41bp 0.847672333707408 0.452487150436137 0.40024996 0.3000645 prediction 0.695344667414817 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438332 chr8:104438333 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4071 0 0 1 0 2 Nucleus 0.438718559828541 0.438718429619777 0 0 hPsi_site_9488 iPseU_CNN:0;iRNA_PseU:0 9489 chr8 67357523 67357523 1 + A G STAD 67357522 + 67357502 67357542 41 GTTGCTGTCGGTGGTGGCTCTACCATGGACACCTGTAAGGC GTTGCTGTCGGTGGTGGCTCTGCCATGGACACCTGTAAGGC < 41bp 0.847661463407282 0.459306279736578 0.46520552 0.2336376 prediction 0.695322926814565 Functional Loss - ADHFE1 ENSG00000147576 CDS Human protein_coding chr8:67357522 chr8:67357523 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_4072 0 0 1 0 1 cytosol 0.439620969448451 0.438710154324504 0 0 hPsi_site_9489 iPseU_CNN:0;iRNA_PseU:0 9490 chr6 155575636 155575636 1 + T C UCEC 155575637 - 155575617 155575657 41 TTACACGTTTTCTCCAGTGGTAATTCACACTTTATGTGACG TTACACGTTTTCTCCAGTGGTGATTCACACTTTATGTGACG < 41bp 0.869842006559928 0.522187291072094 0.7276577 0.29342514 prediction 0.695309430975667 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155575637 chr6:155575636 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_4073 0 0 0 0 0 Cytosol 0.43856916919847 0.438718031586611 0.4553154 0 hPsi_site_9490 iPseU_CNN:0.4553154;iRNA_PseU:0 9491 chr4 185578379 185578379 1 + A G HNSC 185578378 + 185578358 185578398 41 AAACCGTTGTCCTCAGTGTATAGACCAAGATTGTCCAAGCC AAACCGTTGTCCTCAGTGTATGGACCAAGATTGTCCAAGCC < 41bp 0.847634941794684 0.461574860265051 0.8544451 0.62433314 prediction 0.695269883589368 Functional Loss - PRIMPOL ENSG00000164306 CDS Human protein_coding chr4:185578378 chr4:185578379 nonsynonymous SNV 0.919 2 22 hPsi_associated_SNPs_4074 0 0 1 2 1 chromatin 0.438721405779219 0.438718704655863 0.46022392 0 hPsi_site_9491 iPseU_CNN:0.46022392;iRNA_PseU:0 9492 chr22 41349589 41349589 1 + A G HNSC 41349588 + 41349568 41349608 41 GTAGCCCTCTGGGCCTGGGATATTGTGGTTGATAACTGTGC GTAGCCCTCTGGGCCTGGGATGTTGTGGTTGATAACTGTGC < 41bp 0.847634793998439 0.448056353952753 0.38506716 0.3125249 prediction 0.695269587996877 Functional Loss - RBX1 ENSG00000100387 CDS Human protein_coding chr22:41349588 chr22:41349589 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4075 0 0 1 0 2 Ribosome 0.438296706915616 0.438389809525832 0 0 hPsi_site_9492 iPseU_CNN:0;iRNA_PseU:0 9493 chr10 90353811 90353811 1 + A G COAD 90353810 + 90353790 90353830 41 TCATTCTGGCAGATGCTGGTTATGATGTGTGGATGGGAAAT TCATTCTGGCAGATGCTGGTTGTGATGTGTGGATGGGAAAT < 41bp 0.847631589847822 0.466893230392059 0.24501094 0.24121651 prediction 0.695263179695645 Functional Loss - LIPJ ENSG00000204022 CDS Human protein_coding chr10:90353810 chr10:90353811 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4076 0 0 0 0 1 exosome 0.4431582724836 0.439182088685307 0 0 hPsi_site_9493 iPseU_CNN:0;iRNA_PseU:0 9494 chr11 3430172 3430172 1 + A G rs59582150 3430171 + 3430151 3430191 41 AGAAGCTGAAATGATGGCAGTAGTGCCACCTGGTGAATGAA AGAAGCTGAAATGATGGCAGTGGTGCCACCTGGTGAATGAA < 41bp 0.87979408381708 0.532174717829401 0.28376603 0.12761885 prediction 0.695238731975359 Functional Loss - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3430171 chr11:3430172 . . 0 22 hPsi_associated_SNPs_4077 0 0 0 0 0 unknown 0.438719613918028 0.438680201711685 0 0 hPsi_site_9494 iPseU_CNN:0;iRNA_PseU:0 9495 chr20 11904104 11904104 1 + A G BRCA 11904103 + 11904083 11904123 41 GTCCAGCAATACCTTTCCCGTATGGTTTGAATACCCAGTGC GTCCAGCAATACCTTTCCCGTGTGGTTTGAATACCCAGTGC < 41bp 0.882375651413932 0.534759634731538 0.6883649 0.58880365 prediction 0.695232033364788 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11904103 chr20:11904104 synonymous SNV . 0 22 hPsi_associated_SNPs_4078 0 0 1 0 0 Cytosol 0.438711928685785 0.438718609069806 0.1991225 0 hPsi_site_9495 iPseU_CNN:0.1991225;iRNA_PseU:0 9496 chr1 150256883 150256883 1 + A G COAD 150256882 + 150256862 150256902 41 GCAATGGACAGGATCCAGCGTATTGTAGGTGTTTTGCAGAA GCAATGGACAGGATCCAGCGTGTTGTAGGTGTTTTGCAGAA < 41bp 0.893667522679138 0.546063490051473 0.6141728 0.33288568 prediction 0.695208065255328 Functional Loss - CIART ENSG00000159208 CDS Human protein_coding chr1:150256882 chr1:150256883 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4079 0 0 0 0 2 exosome 0.438718593639375 0.438718591565167 0.2283456 0 hPsi_site_9496 iPseU_CNN:0.2283456;iRNA_PseU:0 9497 chr3 182988131 182988131 1 + A G LGG 182988130 + 182988110 182988150 41 AGTTCAGTTGGGCAAATACCTATTGTCCACATGCCAAATTT AGTTCAGTTGGGCAAATACCTGTTGTCCACATGCCAAATTT < 41bp 0.847556433465965 0.478142218730672 0.37334704 0.28554696 prediction 0.69511286693193 Functional Loss - B3GNT5 ENSG00000176597 CDS Human protein_coding chr3:182988130 chr3:182988131 nonsynonymous SNV 0.948 1 22 hPsi_associated_SNPs_4080 0 0 1 0 0 Cytosol 0.438718590865103 0.43871959225433 0 0 hPsi_site_9497 iPseU_CNN:0;iRNA_PseU:0 9498 chr16 84228937 84228937 1 + T C UCEC 84228938 - 84228918 84228958 41 TGCCCAGAGCCACCAGCTTGTAGATCTCCTTCACGTGGCCC TGCCCAGAGCCACCAGCTTGTGGATCTCCTTCACGTGGCCC < 41bp 0.878927751086167 0.531407925997499 0.723742 0.28064567 prediction 0.695039650177337 Functional Loss - ADAD2 ENSG00000140955 CDS Human protein_coding chr16:84228938 chr16:84228937 nonsynonymous SNV 0.587 3 22 hPsi_associated_SNPs_4081 0 0 0 0 0 exosome 0.439467670079197 0.438714741796366 0.447484 0 hPsi_site_9498 iPseU_CNN:0.447484;iRNA_PseU:0 9499 chr4 74283985 74283985 1 + A G KIRC 74283984 + 74283964 74284004 41 ACATTCACCTTCCATGCAGATATATGCACACTTTCTGAGAA ACATTCACCTTCCATGCAGATGTATGCACACTTTCTGAGAA < 41bp 0.879711345448804 0.532229188653804 0.552076 0.33836827 prediction 0.694964313589999 Functional Loss - ALB ENSG00000163631 CDS Human protein_coding chr4:74283984 chr4:74283985 nonsynonymous SNV 0.912 0 22 hPsi_associated_SNPs_4082 0 0 1 3 1 Endoplasmic reticulum 0.436483603684212 0.437210087009002 0.104152 0 hPsi_site_9499 iPseU_CNN:0.104152;iRNA_PseU:0 9500 chr17 10608374 10608374 1 + A G COAD 10608373 + 10608353 10608393 41 TCCAAGGAACCAGGCGGCGATACTACAGACATAGTCTTCTT TCCAAGGAACCAGGCGGCGATGCTACAGACATAGTCTTCTT < 41bp 0.847482136678031 0.46401443898611 0.3252403 0.22627684 prediction 0.694964273356061 Functional Loss - ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608373 chr17:10608374 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_4083 0 0 0 2 0 Cytosol 0.44062364038794 0.438678015936832 0 0 hPsi_site_9500 iPseU_CNN:0;iRNA_PseU:0 9501 chr5 31541486 31541486 1 + A G LUAD 31541485 + 31541465 31541505 41 TGGTGATGATGAAGAAACGGTACAGAGATGGGCTTCAAACC TGGTGATGATGAAGAAACGGTGCAGAGATGGGCTTCAAACC < 41bp 0.847445364669381 0.450852505461676 0.6315337 0.3351825 prediction 0.694890729338762 Functional Loss - C5orf22 ENSG00000082213 CDS Human protein_coding chr5:31541485 chr5:31541486 synonymous SNV . 0 22 hPsi_associated_SNPs_4084 0 0 1 0 2 Ribosome 0.438718587991478 0.438718590933816 0.2630674 0 hPsi_site_9501 iPseU_CNN:0.2630674;iRNA_PseU:0 9502 chr15 41063188 41063188 1 + A G UCEC 41063187 + 41063167 41063207 41 TGAGGAAGTTCTGCAGATGCTAAGGGAGCAGTTTCCTAGCG TGAGGAAGTTCTGCAGATGCTGAGGGAGCAGTTTCCTAGCG < 41bp 0.875617728287636 0.528196766000087 0.3964971 0.2803191 prediction 0.694841924575099 Functional Loss - C15orf62 ENSG00000188277 CDS Human protein_coding chr15:41063187 chr15:41063188 synonymous SNV . 0 22 hPsi_associated_SNPs_4085 0 0 0 0 0 exosome 0.438524342501412 0.438714565737915 0 0 hPsi_site_9502 iPseU_CNN:0;iRNA_PseU:0 9503 chr19 5664086 5664086 1 + A G UCEC 5664085 + 5664065 5664105 41 GGGCCGCCCTGGATGAGCGCTACCATTCTGACTTTAACCGC GGGCCGCCCTGGATGAGCGCTGCCATTCTGACTTTAACCGC < 41bp 0.893452485994318 0.546052799023998 0.663417 0.43476433 prediction 0.694799373940641 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5664085 chr19:5664086 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_4086 0 0 1 0 2 chromatin 0.43871859166843 0.438718592879686 0.326834 0 hPsi_site_9503 iPseU_CNN:0.326834;iRNA_PseU:0 9504 chr1 76253203 76253203 1 + A G KIRP 76253202 + 76253182 76253222 41 GGCACTCCACAGAAGGATGTTATTATCAAGTCAGATGCACC GGCACTCCACAGAAGGATGTTGTTATCAAGTCAGATGCACC < 41bp 0.873849524674351 0.526465834447491 0.52102494 0.31438023 prediction 0.69476738045372 Functional Loss - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76253202 chr1:76253203 nonsynonymous SNV 0.927 0 22 hPsi_associated_SNPs_4087 0 0 1 0 2 Nucleus 0.438718127331851 0.438718164776674 0.04204988 0 hPsi_site_9504 iPseU_CNN:0.04204988;iRNA_PseU:0 9505 chr14 45369836 45369836 1 + A G rs61978647 45369835 + 45369815 45369855 41 AGATGGATTCTTGATGTTATTATATGTCATTCTTAATGAAA AGATGGATTCTTGATGTTATTGTATGTCATTCTTAATGAAA < 41bp 0.847373603672048 0.491601812867815 0.34685653 0.29667363 prediction 0.694747207344097 Functional Loss - C14orf28 ENSG00000179476 CDS Human protein_coding chr14:45369835 chr14:45369836 synonymous SNV . 0 22 hPsi_associated_SNPs_4088 0 0 0 0 0 cytosol 0.438720254014538 0.438719174510889 0 0 hPsi_site_9505 iPseU_CNN:0;iRNA_PseU:0 9506 chr19 5776299 5776299 1 + A G HNSC 5776298 + 5776278 5776318 41 ACAATGGCTTTTATGTCTTCTACATTTCGATCGTGGATCCG ACAATGGCTTTTATGTCTTCTGCATTTCGATCGTGGATCCG < 41bp 0.847359727706483 0.449543938155756 0.52284557 0.3848989 prediction 0.694719455412967 Functional Loss - CATSPERD ENSG00000174898 CDS Human protein_coding chr19:5776298 chr19:5776299 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_4089 0 0 0 0 1 nucleus 0.438716999627819 0.438721041747759 0.04569114 0 hPsi_site_9506 iPseU_CNN:0.04569114;iRNA_PseU:0 9507 chr11 6129421 6129421 1 + A G COAD 6129420 + 6129400 6129440 41 CCATCTGTCGCCCTCTTCAGTACCCCTCCATAGTCACTAAA CCATCTGTCGCCCTCTTCAGTGCCCCTCCATAGTCACTAAA < 41bp 0.876573301360185 0.529218353536674 0.5100109 0.2301862 prediction 0.694709895647023 Functional Loss - OR56B4 ENSG00000180919 CDS Human protein_coding chr11:6129420 chr11:6129421 nonsynonymous SNV 0.122 3 22 hPsi_associated_SNPs_4090 0 0 0 0 0 unknown 0.438718639967164 0.438724505820063 0.0200218000000001 0 hPsi_site_9507 iPseU_CNN:0.0200218000000001;iRNA_PseU:0 9508 chr20 33508478 33508478 1 + A G rs181102979 33508477 + 33508457 33508497 41 CTGGTCATTCCTACGTCACCTATGGGCCACTGGCCAATGGT CTGGTCATTCCTACGTCACCTGTGGGCCACTGGCCAATGGT < 41bp 0.887608860076586 0.540263913209417 0.5316731 0.37441176 prediction 0.694689893734338 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33508477 chr20:33508478 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4091 0 0 1 0 1 Ribosome 0.438718095770891 0.438718502902127 0.0633462 0 hPsi_site_9508 iPseU_CNN:0.0633462;iRNA_PseU:0 9509 chr7 16823415 16823415 1 + A G rs149670076 16823414 + 16823394 16823434 41 TTACCTGCAGAAAAACTTTGTATGGTACCACTGTGTTGGTT TTACCTGCAGAAAAACTTTGTGTGGTACCACTGTGTTGGTT < 41bp 0.86605704117661 0.518712158474673 0.3627233 0.3060943 prediction 0.694689765403874 Functional Loss - TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823414 chr7:16823415 . . 0 22 hPsi_associated_SNPs_4092 0 0 1 1 0 Ribosome 0.438718539003681 0.438716114987652 0 0 hPsi_site_9509 iPseU_CNN:0;iRNA_PseU:0 9510 chrX 135592301 135592301 1 + A G UCEC 135592300 + 135592280 135592320 41 CCAGAGGAAGCTGATTATTGTATTCAGACTCTCGATGGAAG CCAGAGGAAGCTGATTATTGTGTTCAGACTCTCGATGGAAG < 41bp 0.847339537464058 0.443795584729373 0.7231834 0.3729716 prediction 0.694679074928116 Functional Loss - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135592300 chrX:135592301 nonsynonymous SNV 0.974 0 22 hPsi_associated_SNPs_4093 0 0 1 0 2 Ribosome 0.438716249562101 0.438723284669865 0.4463668 0 hPsi_site_9510 iPseU_CNN:0.4463668;iRNA_PseU:0 9511 chr1 32674735 32674735 1 + A G COAD 32674734 + 32674714 32674754 41 CAGCCAAGAGGGTAGTGGTGTACCGGAATGGGGACCCATTC CAGCCAAGAGGGTAGTGGTGTGCCGGAATGGGGACCCATTC < 41bp 0.877676318486447 0.53033943975301 0.8825021 0.33682433 prediction 0.694673757466873 Functional Loss - DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32674734 chr1:32674735 nonsynonymous SNV 0.720 4 22 hPsi_associated_SNPs_4094 0 0 0 0 0 cytosol 0.438721321889124 0.438718958224188 0.7650042 0 hPsi_site_9511 iPseU_CNN:0.7650042;iRNA_PseU:0 9512 chr1 41012975 41012975 1 + A G STAD 41012974 + 41012954 41012994 41 TTCATACAGGAGAGAAACCTTACAGTTGTATTGAATGTGGC TTCATACAGGAGAGAAACCTTGCAGTTGTATTGAATGTGGC < 41bp 0.868647693827504 0.521311961400749 0.31967634 0.27196664 prediction 0.694671464853511 Functional Loss - ZNF684 ENSG00000117010 CDS Human protein_coding chr1:41012974 chr1:41012975 nonsynonymous SNV 0.604 2 22 hPsi_associated_SNPs_4095 0 0 0 0 0 nucleoplasm 0.439083376190444 0.439818195985511 0 0 hPsi_site_9512 iPseU_CNN:0;iRNA_PseU:0 9513 chr5 154320784 154320784 1 + A G rs141087889 154320783 + 154320763 154320803 41 TGTTGATGTTGCAGGTGCGTTATGGATACATAACCTGAGGA TGTTGATGTTGCAGGTGCGTTGTGGATACATAACCTGAGGA < 41bp 0.880577628980147 0.533258145579842 0.7014855 0.4988829 prediction 0.69463896680061 Functional Loss - MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154320783 chr5:154320784 synonymous SNV . 0 22 hPsi_associated_SNPs_4096 0 0 1 0 2 Ribosome 0.438665458401388 0.438687523397783 0.402971 0 hPsi_site_9513 iPseU_CNN:0.402971;iRNA_PseU:0 9514 chr13 25672179 25672179 1 + A G rs148394195 25672178 + 25672158 25672198 41 GTACTACAAGCCCACCAAGCTAAAGAGGCTACCCAGAAAGC GTACTACAAGCCCACCAAGCTGAAGAGGCTACCCAGAAAGC < 41bp 0.871913281957595 0.524603725090353 0.43146402 0.23940721 prediction 0.694619113734484 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25672178 chr13:25672179 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_4097 0 0 0 0 0 Cytosol 0.438718586615022 0.438718592994876 0 0 hPsi_site_9514 iPseU_CNN:0;iRNA_PseU:0 9515 chr19 11233896 11233896 1 + A G HNSC 11233895 + 11233875 11233915 41 GGAGACATCCACCGTCAGGCTAAAGGTCAGCTCCACAGCCG GGAGACATCCACCGTCAGGCTGAAGGTCAGCTCCACAGCCG < 41bp 0.847298787144432 0.448023679378357 0.73607206 0.2538272 prediction 0.694597574288863 Functional Loss - LDLR ENSG00000130164 CDS Human protein_coding chr19:11233895 chr19:11233896 synonymous SNV . 0 22 hPsi_associated_SNPs_4098 0 0 1 0 1 Endoplasmic reticulum 0.441286992699456 0.441419687885621 0.47214412 0 hPsi_site_9515 iPseU_CNN:0.47214412;iRNA_PseU:0 9516 chr2 131414975 131414975 1 + A G rs4850168 131414974 + 131414954 131414994 41 ACATCAAAGAGAAGCTGTGCTATGTTGCCCTGGACTTCGAG ACATCAAAGAGAAGCTGTGCTGTGTTGCCCTGGACTTCGAG < 41bp 0.884931728900644 0.537638330621285 0.3146937 0.26889235 prediction 0.694586796558719 Functional Loss - POTEJ ENSG00000222038 CDS Human protein_coding chr2:131414974 chr2:131414975 nonsynonymous SNV 0.044 1 22 hPsi_associated_SNPs_4099 0 0 0 0 0 exosome 0.438725945053301 0.438847124569089 0 0 hPsi_site_9516 iPseU_CNN:0;iRNA_PseU:0 9517 chr1 159558038 159558038 1 + A G UCEC 159558037 + 159558017 159558057 41 GTGCCTACAGCCTCTTCTCCTACAATACCCAAGGCAGGGAT GTGCCTACAGCCTCTTCTCCTGCAATACCCAAGGCAGGGAT < 41bp 0.874523993533642 0.527247817356209 0.352414 0.28129694 prediction 0.694552352354867 Functional Loss - APCS ENSG00000132703 CDS Human protein_coding chr1:159558037 chr1:159558038 nonsynonymous SNV 0.068 3 22 hPsi_associated_SNPs_4100 0 0 0 0 0 Endoplasmic reticulum 0.438715033817871 0.438184395572108 0 0 hPsi_site_9517 iPseU_CNN:0;iRNA_PseU:0 9518 chr19 58906065 58906065 1 + A G COAD 58906064 + 58906044 58906084 41 TGCAGGGCTCCTCGAACTCCTATGCCATTAAGAAGAAGGAC TGCAGGGCTCCTCGAACTCCTGTGCCATTAAGAAGAAGGAC < 41bp 0.881953026959479 0.534682045899855 0.1732055 0.15517467 prediction 0.694541962119248 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906064 chr19:58906065 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4101 0 0 1 0 1 Ribosome 0.438717234366093 0.438717938811061 0 0 hPsi_site_9518 iPseU_CNN:0;iRNA_PseU:0 9519 chr2 75196543 75196543 1 + A G UCEC 75196542 + 75196522 75196562 41 CTTTGTATGTTTAGGTACTTTAGATTGATTGCCGAGCGGGG CTTTGTATGTTTAGGTACTTTGGATTGATTGCCGAGCGGGG < 41bp 0.84725798926727 0.489816944035238 0.32106823 0.20324048 prediction 0.69451597853454 Functional Loss - POLE4 ENSG00000115350 CDS Human protein_coding chr2:75196542 chr2:75196543 synonymous SNV . 0 22 hPsi_associated_SNPs_4102 0 0 1 0 1 Ribosome 0.438718617129928 0.4387185929951 0 0 hPsi_site_9519 iPseU_CNN:0;iRNA_PseU:0 9520 chr1 212985626 212985626 1 + A G PRAD 212985625 + 212985605 212985645 41 AAACAATTGCCTTTAACTTCTATATGCTTAGAAACAGATTC AAACAATTGCCTTTAACTTCTGTATGCTTAGAAACAGATTC < 41bp 0.874046354324387 0.526843482212987 0.32874036 0.33562028 prediction 0.694405744222801 Functional Loss - TATDN3 ENSG00000203705 CDS Human protein_coding chr1:212985625 chr1:212985626 nonsynonymous SNV 0.918 1 22 hPsi_associated_SNPs_4103 0 0 1 0 4 Ribosome 0.438718407752679 0.438718055199281 0 0 hPsi_site_9520 iPseU_CNN:0;iRNA_PseU:0 9521 chr1 159409857 159409857 1 + A G rs12048482 159409856 + 159409836 159409876 41 CGTAGGTATGAGCCAGCCCATATCATTGGCAGGGTGTGCCA CGTAGGTATGAGCCAGCCCATGTCATTGGCAGGGTGTGCCA < 41bp 0.847190305758216 0.473948107576391 0.24766466 0.21683154 prediction 0.694380611516431 Functional Loss - OR10J1 ENSG00000196184 CDS Human protein_coding chr1:159409856 chr1:159409857 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_4104 0 0 0 0 0 unknown 0.43871859293897 0.438718565729338 0 0 hPsi_site_9521 iPseU_CNN:0;iRNA_PseU:0 9522 chr19 34929610 34929610 1 + A G STAD 34929609 + 34929589 34929629 41 CAGAGAACCTTTCCTGGCTGTACAATTCGTAACACACCTTC CAGAGAACCTTTCCTGGCTGTGCAATTCGTAACACACCTTC < 41bp 0.847185406006998 0.445951056339698 0.7856662 0.31904688 prediction 0.694370812013995 Functional Loss - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34929609 chr19:34929610 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4105 0 0 1 0 1 Cytosol 0.439143729438844 0.439973254815998 0.5713324 0 hPsi_site_9522 iPseU_CNN:0.5713324;iRNA_PseU:0 9523 chr1 53550543 53550543 1 + A G rs2282339 53550542 + 53550522 53550562 41 CCTGCTGACATGTGTATGCGTATGCATACACACCACACACA CCTGCTGACATGTGTATGCGTGTGCATACACACCACACACA < 41bp 0.847177406132335 0.486602474675887 0.66719675 0.37960604 prediction 0.694354812264671 Functional Loss - PODN ENSG00000232993 ncRNA_intronic Human antisense chr1:53550542 chr1:53550543 . . 0 22 hPsi_associated_SNPs_4106 0 0 0 0 0 Cytosol 0.435753555067873 0.430555334063491 0.3343935 0 hPsi_site_9523 iPseU_CNN:0.3343935;iRNA_PseU:0 9524 chr3 43344740 43344740 1 + A G rs17075519 43344739 + 43344719 43344759 41 TGATGGAAAGATTGCTGGATTATATGATCTGGATAAAACCT TGATGGAAAGATTGCTGGATTGTATGATCTGGATAAAACCT < 41bp 0.847168397579768 0.474823127808539 0.38794124 0.28851628 prediction 0.694336795159537 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43344739 chr3:43344740 synonymous SNV . 0 22 hPsi_associated_SNPs_4107 0 0 1 0 0 Cytosol 0.43871798247148 0.438717534527053 0 0 hPsi_site_9524 iPseU_CNN:0;iRNA_PseU:0 9525 chr19 45976097 45976097 1 + A G UCEC 45976096 + 45976076 45976116 41 AACCTGACGGCTTCTCTCTTTACACACAGTGAAGTTCAAGT AACCTGACGGCTTCTCTCTTTGCACACAGTGAAGTTCAAGT < 41bp 0.847143732557805 0.458545160799084 0.7087771 0.2892999 prediction 0.694287465115611 Functional Loss - FOSB ENSG00000125740 CDS Human protein_coding chr19:45976096 chr19:45976097 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4108 0 0 1 0 0 Cytosol 0.438717722018307 0.438720544795072 0.4175542 0 hPsi_site_9525 iPseU_CNN:0.4175542;iRNA_PseU:0 9526 chr9 4585491 4585491 1 + A G COAD 4585490 + 4585470 4585510 41 ACTCAGACACCAAGAAGTCTTATGTCAATGGAGGCTTTGCA ACTCAGACACCAAGAAGTCTTGTGTCAATGGAGGCTTTGCA < 41bp 0.847126294969671 0.480955920539022 0.40835226 0.27965516 prediction 0.694252589939342 Functional Loss - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585490 chr9:4585491 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_4109 0 0 0 0 0 chromatin 0.43869880098957 0.438674022010973 0 0 hPsi_site_9526 iPseU_CNN:0;iRNA_PseU:0 9527 chr17 71199879 71199879 1 + A C OV 71199878 + 71199858 71199898 41 CAGGAGATGCTGAAAAGCTGTATGGTTCAAGTAGTAGCTGC CAGGAGATGCTGAAAAGCTGTCTGGTTCAAGTAGTAGCTGC < 41bp 0.847125776734524 0.490353357406628 0.5616574 0.3376459 prediction 0.694251553469049 Functional Loss - COG1 ENSG00000166685 CDS Human protein_coding chr17:71199878 chr17:71199879 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_4110 0 0 1 0 1 Nucleus 0.43871751444927 0.438716947596227 0.1233148 0 hPsi_site_9527 iPseU_CNN:0.1233148;iRNA_PseU:0 9528 chr19 21719244 21719244 1 + A G rs148845371 21719243 + 21719223 21719263 41 GTAAGCTATACAAAGGAGGTTATAATGGACTTAACCAATGT GTAAGCTATACAAAGGAGGTTGTAATGGACTTAACCAATGT < 41bp 0.847114452014349 0.493391399556315 0.5664161 0.24141747 prediction 0.694228904028697 Functional Loss - ZNF429 ENSG00000197013 CDS Human protein_coding chr19:21719243 chr19:21719244 nonsynonymous SNV 0.074 0 22 hPsi_associated_SNPs_4111 0 0 0 0 0 nucleolus 0.438702882626727 0.438268241383591 0.1328322 0 hPsi_site_9528 iPseU_CNN:0.1328322;iRNA_PseU:0 9529 chr19 39963878 39963878 1 + A G BLCA 39963877 + 39963857 39963897 41 CGGGCGGCATGACCTCGACCTATGGGAGGACGCCCATGTAT CGGGCGGCATGACCTCGACCTGTGGGAGGACGCCCATGTAT < 41bp 0.847103494963413 0.439467977276498 0.51990956 0.48895693 prediction 0.694206989926827 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963877 chr19:39963878 nonsynonymous SNV 0.934 2 22 hPsi_associated_SNPs_4112 0 0 1 0 2 Nucleus 0.440190744851868 0.439085348101946 0.03981912 0 hPsi_site_9529 iPseU_CNN:0.03981912;iRNA_PseU:0 9530 chr14 61512854 61512854 1 + A G UCEC 61512853 + 61512833 61512873 41 AAGTTTTCTCATTTATTTTATATCTGCACTCTTTGGGTACC AAGTTTTCTCATTTATTTTATGTCTGCACTCTTTGGGTACC < 41bp 0.84706825512019 0.473439810760096 0.33114722 0.32574588 prediction 0.69413651024038 Functional Loss - SLC38A6 ENSG00000139974 CDS Human protein_coding chr14:61512853 chr14:61512854 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_4113 0 0 1 5 2 Endoplasmic reticulum 0.438718593295058 0.438718659400692 0 0 hPsi_site_9530 iPseU_CNN:0;iRNA_PseU:0 9531 chr19 13084403 13084403 1 + A G STAD 13084402 + 13084382 13084422 41 CTCCCGTCGACGGGTGAAGATATCCACCATGCTGATCGAGG CTCCCGTCGACGGGTGAAGATGTCCACCATGCTGATCGAGG < 41bp 0.886151712513262 0.53909397353866 0.6503012 0.3060168 prediction 0.694115477949204 Functional Loss - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13084402 chr19:13084403 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_4114 0 0 0 0 0 Nucleus 0.43870798321011 0.438718254503389 0.3006024 0 hPsi_site_9531 iPseU_CNN:0.3006024;iRNA_PseU:0 9532 chr7 99701046 99701046 1 + A G COAD 99701045 + 99701025 99701065 41 CCACTAGGACTATGGCTATGTACAGACCACATCCACGGAGA CCACTAGGACTATGGCTATGTGCAGACCACATCCACGGAGA < 41bp 0.89154978549656 0.544545788496115 0.55903846 0.19817102 prediction 0.69400799400089 Functional Loss - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99701045 chr7:99701046 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4115 0 0 1 0 2 Cytosol 0.438718137997009 0.438666956069578 0.11807692 0 hPsi_site_9532 iPseU_CNN:0.11807692;iRNA_PseU:0 9533 chr7 98941918 98941918 1 + A G COAD 98941917 + 98941897 98941937 41 ACCCATGTCTCACTTGCAGGTATTGACTGGGCTCCCAAGAG ACCCATGTCTCACTTGCAGGTGTTGACTGGGCTCCCAAGAG < 41bp 0.846987940253237 0.445595811835684 0.59740627 0.21020344 prediction 0.693975880506474 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98941917 chr7:98941918 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4116 0 0 1 0 1 Cytosol 0.438746202180757 0.438720157876246 0.19481254 0 hPsi_site_9533 iPseU_CNN:0.19481254;iRNA_PseU:0 9534 chr11 20404575 20404575 1 + A G LUSC 20404574 + 20404554 20404594 41 CGCCCAGGTGAATGGCTGGTTAGAAAGTTCTTTGGCTCCTT CGCCCAGGTGAATGGCTGGTTGGAAAGTTCTTTGGCTCCTT < 41bp 0.886652285852145 0.539668718692561 0.65389806 0.35955244 prediction 0.693967134319168 Functional Loss - HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20404574 chr11:20404575 nonsynonymous SNV 0.434 3 22 hPsi_associated_SNPs_4117 0 0 1 0 0 Endoplasmic reticulum 0.438718322784534 0.438718592995106 0.30779612 0 hPsi_site_9534 iPseU_CNN:0.30779612;iRNA_PseU:0 9535 chr9 115216406 115216406 1 + A G STAD 115216405 + 115216385 115216425 41 TCTCTCAGTGATGATGTTGTTAAAGCCACTCAAGCAATCTA TCTCTCAGTGATGATGTTGTTGAAGCCACTCAAGCAATCTA < 41bp 0.881167136299209 0.534186444131776 0.6695021 0.47339463 prediction 0.693961384334864 Functional Loss - HSDL2 ENSG00000119471 CDS Human protein_coding chr9:115216405 chr9:115216406 nonsynonymous SNV 0.956 1 22 hPsi_associated_SNPs_4118 0 0 1 0 1 Ribosome 0.438521352841067 0.438771240594101 0.3390042 0 hPsi_site_9535 iPseU_CNN:0.3390042;iRNA_PseU:0 9536 chrX 49143177 49143177 1 + A G LIHC 49143176 + 49143156 49143196 41 GGCCGGGACAGAAGCCCAGATAGAGGTCACCAGTGAGTGGG GGCCGGGACAGAAGCCCAGATGGAGGTCACCAGTGAGTGGG < 41bp 0.84696400495831 0.453277858624351 0.18165311 0.10693887 prediction 0.693928009916619 Functional Loss - PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49143176 chrX:49143177 nonsynonymous SNV 0.654 0 22 hPsi_associated_SNPs_4119 0 0 0 0 0 Endoplasmic reticulum 0.438718592995102 0.438718736214541 0 0 hPsi_site_9536 iPseU_CNN:0;iRNA_PseU:0 9537 chrX 144904932 144904932 1 + A G COAD 144904931 + 144904911 144904951 41 GTTTTGGACCCATCATGGTGTACCAGACCAAGTCTCCTGTG GTTTTGGACCCATCATGGTGTGCCAGACCAAGTCTCCTGTG < 41bp 0.846920666746704 0.465279496340023 0.6856779 0.33625597 prediction 0.693841333493409 Functional Loss - SLITRK2 ENSG00000185985 CDS Human protein_coding chrX:144904931 chrX:144904932 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4120 0 0 0 0 0 Cytosol 0.438718449962339 0.438718592643141 0.3713558 0 hPsi_site_9537 iPseU_CNN:0.3713558;iRNA_PseU:0 9538 chr15 41102900 41102900 1 + A C rs147650406 41102899 + 41102879 41102919 41 CCAGCAGACACAGGATCTGCTAACGCAGCTGGCAGCTGAGG CCAGCAGACACAGGATCTGCTCACGCAGCTGGCAGCTGAGG < 41bp 0.846917015848711 0.485270003340061 0.3125344 0.1648978 prediction 0.693834031697423 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41102899 chr15:41102900 synonymous SNV . 0 22 hPsi_associated_SNPs_4121 0 0 1 0 2 Ribosome 0.438702208720422 0.438387556922964 0 0 hPsi_site_9538 iPseU_CNN:0;iRNA_PseU:0 9539 chr20 31671225 31671225 1 + A G LUSC 31671224 + 31671204 31671244 41 TGTCCGAGGACCCCCCCCAGTATATACCAACGGCAAAAAAC TGTCCGAGGACCCCCCCCAGTGTATACCAACGGCAAAAAAC < 41bp 0.889345164280173 0.542443989475319 0.28698277 0.2812397 prediction 0.693802349609708 Functional Loss - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31671224 chr20:31671225 synonymous SNV . 0 22 hPsi_associated_SNPs_4122 0 0 0 0 1 exosome 0.439283493988758 0.439153343101307 0 0 hPsi_site_9539 iPseU_CNN:0;iRNA_PseU:0 5-HTT brain serotonin transporter levels 9540 chr19 52793363 52793363 1 + A G LIHC 52793362 + 52793342 52793382 41 AAAGCAGGAAACAAGCCTATTACAAATCAACTTGGATTAAC AAAGCAGGAAACAAGCCTATTGCAAATCAACTTGGATTAAC < 41bp 0.871309965187386 0.52441326866582 0.580278 0.39335883 prediction 0.69379339304313 Functional Loss - ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52793362 chr19:52793363 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4123 0 0 0 2 1 chromatin 0.438718747004186 0.438803195986572 0.160556 0 hPsi_site_9540 iPseU_CNN:0.160556;iRNA_PseU:0 9541 chr2 219296887 219296887 1 + A C UCEC 219296886 + 219296866 219296906 41 TCATCGGCGAGAAGCAGCATTACCTGCTCTACGTTTGGCAG TCATCGGCGAGAAGCAGCATTCCCTGCTCTACGTTTGGCAG < 41bp 0.846848236653782 0.490872199159148 0.47834688 0.18338734 prediction 0.693696473307565 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219296886 chr2:219296887 nonsynonymous SNV 0.958 3 22 hPsi_associated_SNPs_4124 0 0 1 0 1 Nucleus 0.438718688127281 0.438718593783721 0 0 hPsi_site_9541 iPseU_CNN:0;iRNA_PseU:0 9542 chr1 166818288 166818288 1 + A G LIHC 166818287 + 166818267 166818307 41 GGCCTCCGTCTGCCTCGGGATATCACAGAGCTGCCCGAGTG GGCCTCCGTCTGCCTCGGGATGTCACAGAGCTGCCCGAGTG < 41bp 0.846841739619218 0.441375976956574 0.8274822 0.45533374 prediction 0.693683479238437 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818287 chr1:166818288 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_4125 0 0 1 0 0 Nucleus 0.438713278079755 0.438717796119925 0.6549644 0 hPsi_site_9542 iPseU_CNN:0.6549644;iRNA_PseU:0 9543 chr1 41463094 41463094 1 + A G STAD 41463093 + 41463073 41463113 41 CGCTTGCTGGAGACCTGCTCTATTGCCCTTGTGGGCAAATA CGCTTGCTGGAGACCTGCTCTGTTGCCCTTGTGGGCAAATA < 41bp 0.846834617369004 0.447907811108635 0.5857384 0.32554495 prediction 0.693669234738008 Functional Loss - CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41463093 chr1:41463094 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_4126 0 0 1 0 1 Nucleus 0.438847465281097 0.438736390356953 0.1714768 0 hPsi_site_9543 iPseU_CNN:0.1714768;iRNA_PseU:0 9544 chr19 7963914 7963914 1 + A C rs524029 7963913 + 7963893 7963933 41 CACCAGGGCCCTATCCGAGGTATCCGGGGAGAACCAGAAGG CACCAGGGCCCTATCCGAGGTCTCCGGGGAGAACCAGAAGG < 41bp 0.850056272019838 0.50323209712511 0.35528022 0.22013772 prediction 0.693648349789456 Functional Loss - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7963913 chr19:7963914 synonymous SNV . 0 22 hPsi_associated_SNPs_4127 0 0 1 0 0 chromatin 0.438718593182161 0.438718594220278 0 0 hPsi_site_9544 iPseU_CNN:0;iRNA_PseU:0 9545 chr2 114353977 114353977 1 + A G rs200016064 114353976 + 114353956 114353996 41 AGGTCCCTGAGAACTACTTCTATGTGCCAGACCTGGGCCAG AGGTCCCTGAGAACTACTTCTGTGTGCCAGACCTGGGCCAG < 41bp 0.846817209227944 0.465498761106456 0.30720615 0.23352936 prediction 0.693634418455888 Functional Loss - WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114353976 chr2:114353977 . . 0 22 hPsi_associated_SNPs_4128 0 0 1 2 1 unknown 0.438755492992395 0.438978621114519 0 0 hPsi_site_9545 iPseU_CNN:0;iRNA_PseU:0 9546 chr11 6261890 6261890 1 + A G COAD 6261889 + 6261869 6261909 41 ATCATGCACTGGTGAAGAAGTACATGAAGCTGCAGCACGTC ATCATGCACTGGTGAAGAAGTGCATGAAGCTGCAGCACGTC < 41bp 0.846815636263101 0.443035787561163 0.6580488 0.34921724 prediction 0.693631272526203 Functional Loss - CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6261889 chr11:6261890 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4129 0 0 0 0 2 exosome 0.43863473343217 0.438711762986511 0.3160976 0 hPsi_site_9546 iPseU_CNN:0.3160976;iRNA_PseU:0 9547 chr20 17587933 17587933 1 + A G rs11907325 17587932 + 17587912 17587952 41 AGTAAACTATTCTATAAACATATGCAAACAGCCCTAAATAA AGTAAACTATTCTATAAACATGTGCAAACAGCCCTAAATAA < 41bp 0.847925053985562 0.501135685797666 0.3373816 0.28401202 prediction 0.693578736375792 Functional Loss - DSTN ENSG00000125868 UTR3 Human protein_coding chr20:17587932 chr20:17587933 . . 0 22 hPsi_associated_SNPs_4130 0 0 1 5 0 Ribosome 0.43874018113447 0.438731950855412 0 0 hPsi_site_9547 iPseU_CNN:0;iRNA_PseU:0 9548 chr3 58154281 58154281 1 + A G KIRP 58154280 + 58154260 58154300 41 GCCAGGAAACACCTGAAGGGTACAAAGTCATGTACACCCCC GCCAGGAAACACCTGAAGGGTGCAAAGTCATGTACACCCCC < 41bp 0.8467890241433 0.463633387600105 0.5832824 0.29270756 prediction 0.693578048286601 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58154280 chr3:58154281 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4131 0 0 1 0 0 Cytosol 0.438721259501536 0.438831601819482 0.1665648 0 hPsi_site_9548 iPseU_CNN:0.1665648;iRNA_PseU:0 9549 chr17 39261778 39261778 1 + A G rs556157666 39261777 + 39261757 39261797 41 CTGCCGCCCCAGCTGTTGTGTATCCAGCTGCTGCAGGCCCC CTGCCGCCCCAGCTGTTGTGTGTCCAGCTGCTGCAGGCCCC < 41bp 0.874152297233738 0.527377023728719 0.3889025 0.2686879 prediction 0.693550547010037 Functional Loss - KRTAP4-9 ENSG00000212722 CDS Human protein_coding chr17:39261777 chr17:39261778 synonymous SNV . 0 22 hPsi_associated_SNPs_4132 0 0 0 0 0 unknown 0.438718592995102 0.438718592994595 0 0 hPsi_site_9549 iPseU_CNN:0;iRNA_PseU:0 9550 chr17 18111625 18111625 1 + A G LUAD 18111624 + 18111604 18111644 41 GTAGCTTCAGCTCTGAGAACTACTGGCGCAAGTCATACGAG GTAGCTTCAGCTCTGAGAACTGCTGGCGCAAGTCATACGAG < 41bp 0.846758057629062 0.459631641120907 0.8035715 0.3072784 prediction 0.693516115258124 Functional Loss - ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18111624 chr17:18111625 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4133 0 0 1 0 1 Cytosol 0.444751866975148 0.44008350590692 0.607143 0 hPsi_site_9550 iPseU_CNN:0.607143;iRNA_PseU:0 9551 chr7 138261152 138261152 1 + A G COAD 138261151 + 138261131 138261171 41 GACTAGTGTACACCCCCCAATACGTTCACCTAGTGCCTCCA GACTAGTGTACACCCCCCAATGCGTTCACCTAGTGCCTCCA < 41bp 0.846757746837237 0.43652029372761 0.3165507 0.20416287 prediction 0.693515493674475 Functional Loss - TRIM24 ENSG00000122779 CDS Human protein_coding chr7:138261151 chr7:138261152 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4134 0 0 1 0 2 Cytosol 0.438718593243572 0.438718612852024 0 0 hPsi_site_9551 iPseU_CNN:0;iRNA_PseU:0 9552 chr2 101619237 101619237 1 + A G UCEC 101619236 + 101619216 101619256 41 ACGAAGTGGTAACCCGAGAATACACCATCAACATTCACAAG ACGAAGTGGTAACCCGAGAATGCACCATCAACATTCACAAG < 41bp 0.846750645019733 0.466192333314204 0.36817276 0.19257236 prediction 0.693501290039466 Functional Loss - RPL31 ENSG00000071082 CDS Human protein_coding chr2:101619236 chr2:101619237 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4135 0 0 1 0 1 Cytosol 0.438579437267543 0.438812734085707 0 0 hPsi_site_9552 iPseU_CNN:0;iRNA_PseU:0 9553 chr1 161681755 161681755 1 + A G STAD 161681754 + 161681734 161681774 41 AGCGCCAATTCTCAGAGCTGTACCCTCAGCTGAACCCCAAG AGCGCCAATTCTCAGAGCTGTGCCCTCAGCTGAACCCCAAG < 41bp 0.887910091931947 0.541177538958092 0.74353135 0.25318122 prediction 0.693465105947711 Functional Loss - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681754 chr1:161681755 synonymous SNV . 0 22 hPsi_associated_SNPs_4136 0 0 0 0 1 Endoplasmic reticulum 0.438718592428732 0.438718592979075 0.4870627 0 hPsi_site_9553 iPseU_CNN:0.4870627;iRNA_PseU:0 9554 chr4 188924108 188924108 1 + A G CESC 188924107 + 188924087 188924127 41 TGTCAGCGCGGTGTGGGCCTTATGTGATGGCTATGTGTGCT TGTCAGCGCGGTGTGGGCCTTGTGTGATGGCTATGTGTGCT < 41bp 0.846729166706609 0.456731715596304 0.57559806 0.34363878 prediction 0.693458333413218 Functional Loss - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924107 chr4:188924108 synonymous SNV . 0 22 hPsi_associated_SNPs_4137 0 0 0 0 0 Nucleus 0.439450131947445 0.439691440407789 0.15119612 0 hPsi_site_9554 iPseU_CNN:0.15119612;iRNA_PseU:0 9555 chr1 148594439 148594439 1 + A G LUAD 148594438 + 148594418 148594458 41 AGTGGAAGAGCCTGAAGTCTTACAGGACTCACTGGATAGAT AGTGGAAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGAT < 41bp 0.846723601976608 0.461267192531961 0.56884617 0.3704542 prediction 0.693447203953216 Functional Loss - NBPF15 ENSG00000243452 CDS Human other chr1:148594438 chr1:148594439 synonymous SNV . 0 22 hPsi_associated_SNPs_4138 0 0 1 0 1 Cytosol 0.438715572573845 0.438712335628104 0.13769234 0 hPsi_site_9555 iPseU_CNN:0.13769234;iRNA_PseU:0 9556 chr5 175913437 175913437 1 + A G PAAD 175913436 + 175913416 175913456 41 CCATCACGACCCCTGCAGGTTAATACAGCTGACCACAGGAT CCATCACGACCCCTGCAGGTTGATACAGCTGACCACAGGAT < 41bp 0.891139471320697 0.544416642822301 0.32972986 0.25342074 prediction 0.693445656996792 Functional Loss - FAF2 ENSG00000113194 CDS Human protein_coding chr5:175913436 chr5:175913437 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4139 0 0 1 0 1 Endoplasmic reticulum 0.43871263721141 0.438787236693761 0 0 hPsi_site_9556 iPseU_CNN:0;iRNA_PseU:0 9557 chr4 1018336 1018336 1 + A G STAD 1018335 + 1018315 1018355 41 GGTCGCGGCCCGACGGCTCCTACCTCAATAAGCTGCTCATC GGTCGCGGCCCGACGGCTCCTGCCTCAATAAGCTGCTCATC < 41bp 0.892045294799138 0.545326238415928 0.744972 0.23909077 prediction 0.69343811276642 Functional Loss - FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1018335 chr4:1018336 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4140 0 0 1 0 0 Ribosome 0.438718592995446 0.438718593115282 0.489944 0 hPsi_site_9557 iPseU_CNN:0.489944;iRNA_PseU:0 9558 chr6 71566690 71566690 1 + A G UCEC 71566689 + 71566669 71566709 41 ACTTTCCAAAGACTCCATCTTATCTCTGTATGGCACAGGAA ACTTTCCAAAGACTCCATCTTGTCTCTGTATGGCACAGGAA < 41bp 0.846701254068307 0.45781349634581 0.18985596 0.11837384 prediction 0.693402508136615 Functional Loss - SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71566689 chr6:71566690 synonymous SNV . 0 22 hPsi_associated_SNPs_4141 0 0 1 0 1 chromatin 0.438718592994532 0.438718627323162 0 0 hPsi_site_9558 iPseU_CNN:0;iRNA_PseU:0 9559 chrX 100240711 100240711 1 + A G LIHC 100240710 + 100240690 100240730 41 GGAACTGACTACACTTTTGTTAGATGAGTATGAACTTTCCA GGAACTGACTACACTTTTGTTGGATGAGTATGAACTTTCCA < 41bp 0.846652726568642 0.46909140052992 0.3566673 0.3122732 prediction 0.693305453137285 Functional Loss - ARL13A ENSG00000174225 CDS Human protein_coding chrX:100240710 chrX:100240711 synonymous SNV . 0 22 hPsi_associated_SNPs_4142 0 0 0 0 1 unknown 0.43853995201633 0.438861841979532 0 0 hPsi_site_9559 iPseU_CNN:0;iRNA_PseU:0 9560 chr12 121132723 121132723 1 + A G BLCA 121132722 + 121132702 121132742 41 GCTCACGATGAAATTATACCTATGAGCATCAGAAAGGGGAA GCTCACGATGAAATTATACCTGTGAGCATCAGAAAGGGGAA < 41bp 0.885711449064548 0.539081806782617 0.25023353 0.20711565 prediction 0.693259284563863 Functional Loss - MLEC ENSG00000110917 CDS Human protein_coding chr12:121132722 chr12:121132723 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4143 0 0 1 0 2 Ribosome 0.438718592790257 0.438718592178713 0 0 hPsi_site_9560 iPseU_CNN:0;iRNA_PseU:0 9561 chr9 139318067 139318067 1 + A G rs114945516 139318066 + 139318046 139318086 41 GGAGGCAGCAAAGGCTGACCTATCAAAGCCTCCCGGAGGCC GGAGGCAGCAAAGGCTGACCTGTCAAAGCCTCCCGGAGGCC < 41bp 0.846625496913198 0.48715309857269 0.33391547 0.25003093 prediction 0.693250993826396 Functional Loss - PMPCA ENSG00000165688 UTR3 Human protein_coding chr9:139318066 chr9:139318067 . . 0 22 hPsi_associated_SNPs_4144 0 0 1 0 0 Cytosol 0.43871859299511 0.438718592995229 0 0 hPsi_site_9561 iPseU_CNN:0;iRNA_PseU:0 9562 chr15 45059837 45059837 1 + A G STAD 45059836 + 45059816 45059856 41 AAGGAGGACAGTTGTCCTTCTACAATGCTAAAACCATGACT AAGGAGGACAGTTGTCCTTCTGCAATGCTAAAACCATGACT < 41bp 0.846625306266308 0.466293220234071 0.45385465 0.40113804 prediction 0.693250612532616 Functional Loss - TRIM69 ENSG00000185880 CDS Human protein_coding chr15:45059836 chr15:45059837 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4145 0 0 0 0 0 Ribosome 0.438735654493568 0.438718949833237 0 0 hPsi_site_9562 iPseU_CNN:0;iRNA_PseU:0 9563 chr3 169497118 169497118 1 + A G PRAD 169497117 + 169497097 169497137 41 AAAGAACACTCTATGTCTAATATAGCCAGCGTCAAGAGTCC AAAGAACACTCTATGTCTAATGTAGCCAGCGTCAAGAGTCC < 41bp 0.881537279118724 0.534932535641812 0.44030744 0.27704597 prediction 0.693209486953824 Functional Loss - MYNN ENSG00000085274 CDS Human protein_coding chr3:169497117 chr3:169497118 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_4146 0 0 1 0 0 Nucleus 0.438718592712682 0.43871844241414 0 0 hPsi_site_9563 iPseU_CNN:0;iRNA_PseU:0 9564 chr3 113514046 113514046 1 + A G LIHC 113514045 + 113514025 113514065 41 AGAAGGGAGTGTCAGCATTGTAGGAGCGTAAGCACCCACAC AGAAGGGAGTGTCAGCATTGTGGGAGCGTAAGCACCCACAC < 41bp 0.846602122038592 0.464176885716157 0.7350193 0.25650433 prediction 0.693204244077184 Functional Loss - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113514045 chr3:113514046 synonymous SNV . 0 22 hPsi_associated_SNPs_4147 0 0 1 0 0 Ribosome 0.438577047257319 0.438739464434869 0.4700386 0 hPsi_site_9564 iPseU_CNN:0.4700386;iRNA_PseU:0 9565 chr2 162224035 162224035 1 + A G LUSC 162224034 + 162224014 162224054 41 TGGACACAGCAGAACAAGTCTATATCTCTTCCCTGGCACTG TGGACACAGCAGAACAAGTCTGTATCTCTTCCCTGGCACTG < 41bp 0.846535760598187 0.453890082037412 0.43917692 0.23440403 prediction 0.693071521196373 Functional Loss - PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162224034 chr2:162224035 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4148 0 0 1 0 2 Cytosol 0.438924767306383 0.438762028754001 0 0 hPsi_site_9565 iPseU_CNN:0;iRNA_PseU:0 9566 chr17 7480907 7480907 1 + A G UCEC 7480906 + 7480886 7480926 41 GGAGTGGAAGCTGGACACACTATGTGACTTGTATGAAACCC GGAGTGGAAGCTGGACACACTGTGTGACTTGTATGAAACCC < 41bp 0.888522502317293 0.541986808494869 0.34031618 0.3904907 prediction 0.693071387644848 Functional Loss - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480906 chr17:7480907 synonymous SNV . 0 22 hPsi_associated_SNPs_4149 0 0 1 0 1 Cytosol 0.438718132852529 0.438717180979071 0 0 hPsi_site_9566 iPseU_CNN:0;iRNA_PseU:0 9567 chr18 48591895 48591895 1 + A G CESC 48591894 + 48591874 48591914 41 CTATTGTTACTGTTGATGGATACGTGGACCCTTCTGGAGGA CTATTGTTACTGTTGATGGATGCGTGGACCCTTCTGGAGGA < 41bp 0.846533010958427 0.460401767265213 0.7686852 0.28025308 prediction 0.693066021916854 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48591894 chr18:48591895 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_4150 0 0 1 0 1 Cytosol 0.438667729387934 0.438717931706637 0.5373704 0 hPsi_site_9567 iPseU_CNN:0.5373704;iRNA_PseU:0 9568 chr2 183998333 183998333 1 + A G THCA 183998332 + 183998312 183998352 41 CAGAGTCCTCTTGTTGGAGTTACATCTACTCCTGGAACAGG CAGAGTCCTCTTGTTGGAGTTGCATCTACTCCTGGAACAGG < 41bp 0.846481074462597 0.463662733234858 0.6026085 0.2487258 prediction 0.692962148925195 Functional Loss - NUP35 ENSG00000163002 CDS Human protein_coding chr2:183998332 chr2:183998333 nonsynonymous SNV 0.302 0 22 hPsi_associated_SNPs_4151 0 0 1 0 2 chromatin 0.438724700574813 0.43871857507767 0.205217 0 hPsi_site_9568 iPseU_CNN:0.205217;iRNA_PseU:0 9569 chr16 29809805 29809805 1 + A G READ 29809804 + 29809784 29809824 41 AGAATGCCAGTGTGCTTGCCTATGGACCCACAGGAGCTGGT AGAATGCCAGTGTGCTTGCCTGTGGACCCACAGGAGCTGGT < 41bp 0.894221035848192 0.54776727633348 0.33077413 0.21382818 prediction 0.692907519029423 Functional Loss - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29809804 chr16:29809805 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4152 0 0 1 0 1 Cytosol 0.438716221081258 0.438279836600045 0 0 hPsi_site_9569 iPseU_CNN:0;iRNA_PseU:0 9570 chr12 7362758 7362758 1 + A G UCEC 7362757 + 7362737 7362777 41 TGTTAGGCCAGAGCGATGCCTATGGGGCAGCCGACGCGCGG TGTTAGGCCAGAGCGATGCCTGTGGGGCAGCCGACGCGCGG < 41bp 0.846401406501881 0.456147621835556 0.42227858 0.31538618 prediction 0.692802813003762 Functional Loss - PEX5 ENSG00000139197 CDS Human protein_coding chr12:7362757 chr12:7362758 nonsynonymous SNV 0.887 2 22 hPsi_associated_SNPs_4153 0 0 1 0 1 Ribosome 0.438741351117322 0.438881026841527 0 0 hPsi_site_9570 iPseU_CNN:0;iRNA_PseU:0 9571 chr11 93492972 93492972 1 + A G rs139891911 93492971 + 93492951 93492991 41 TGAATAAATGGTTGCATTTTTATGAAATGAAAGCTCCTTTG TGAATAAATGGTTGCATTTTTGTGAAATGAAAGCTCCTTTG < 41bp 0.846371948175524 0.46209305385973 0.21122935 0.22231436 prediction 0.692743896351048 Functional Loss - C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93492971 chr11:93492972 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4154 0 0 1 0 2 Cytosol 0.438735147606549 0.438729673978272 0 0 hPsi_site_9571 iPseU_CNN:0;iRNA_PseU:0 9572 chr16 8904969 8904969 1 + A G SKCM 8904968 + 8904948 8904988 41 TGAATTCCGAAATGGGATGTTAAACGTGTCCCCTATTGGAA TGAATTCCGAAATGGGATGTTGAACGTGTCCCCTATTGGAA < 41bp 0.890457468728248 0.544086324337917 0.38101405 0.34444964 prediction 0.692742288780662 Functional Loss - PMM2 ENSG00000140650 CDS Human protein_coding chr16:8904968 chr16:8904969 synonymous SNV . 0 22 hPsi_associated_SNPs_4155 0 0 1 0 2 Ribosome 0.438720116963013 0.438718592998858 0 0 hPsi_site_9572 iPseU_CNN:0;iRNA_PseU:0 9573 chr7 102953469 102953469 1 + A G LUSC 102953468 + 102953448 102953488 41 TTTTTCCCATCTTTCAGGTGTATTTACTGGGTATGTTTTCA TTTTTCCCATCTTTCAGGTGTGTTTACTGGGTATGTTTTCA < 41bp 0.846357125261958 0.475934411760466 0.2677917 0.27412963 prediction 0.692714250523915 Functional Loss - DNAJC2 ENSG00000105821 CDS Human protein_coding chr7:102953468 chr7:102953469 synonymous SNV . 0 22 hPsi_associated_SNPs_4156 0 0 1 3 0 Cytosol 0.438718592993712 0.438718593083857 0 0 hPsi_site_9573 iPseU_CNN:0;iRNA_PseU:0 9574 chr1 219383944 219383944 1 + A G HNSC 219383943 + 219383923 219383963 41 TCATCAAGATGTGGCAGGAGTATTTGCTCTTTCTAGTTTTC TCATCAAGATGTGGCAGGAGTGTTTGCTCTTTCTAGTTTTC < 41bp 0.846342398527242 0.473985061643875 0.29546934 0.2719984 prediction 0.692684797054483 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219383943 chr1:219383944 synonymous SNV . 0 22 hPsi_associated_SNPs_4157 0 0 1 0 3 Ribosome 0.438718592999883 0.438718592979303 0 0 hPsi_site_9574 iPseU_CNN:0;iRNA_PseU:0 9575 chr9 35792873 35792873 1 + A G LUAD 35792872 + 35792852 35792892 41 GGGTGAGTTTGTGGTGACACTACACGGGCACTTCAATTGGA GGGTGAGTTTGTGGTGACACTGCACGGGCACTTCAATTGGA < 41bp 0.846317211913311 0.452760057388158 0.32866716 0.19751999 prediction 0.692634423826621 Functional Loss - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792872 chr9:35792873 synonymous SNV . 0 22 hPsi_associated_SNPs_4158 0 0 0 0 0 chromatin 0.44148483266121 0.442288251130437 0 0 hPsi_site_9575 iPseU_CNN:0;iRNA_PseU:0 9576 chr5 68568741 68568741 1 + A G UCEC 68568740 + 68568720 68568760 41 ACATGTGTAGTCTTCCAGATTATGTGACATTTAAGAGTTTC ACATGTGTAGTCTTCCAGATTGTGTGACATTTAAGAGTTTC < 41bp 0.875885466669071 0.529597487127171 0.3127754 0.30139238 prediction 0.6925759590838 Functional Loss - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68568740 chr5:68568741 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4159 0 0 0 0 1 Cytosol 0.438717934698103 0.438726094854756 0 0 hPsi_site_9576 iPseU_CNN:0;iRNA_PseU:0 9577 chr7 86415665 86415665 1 + A G UCEC 86415664 + 86415644 86415684 41 GTGATAAGTCGCGCTATGATTACTTTGCCAGGACCGTGCCC GTGATAAGTCGCGCTATGATTGCTTTGCCAGGACCGTGCCC < 41bp 0.846268655913615 0.449602891596734 0.49710405 0.28416553 prediction 0.69253731182723 Functional Loss - GRM3 ENSG00000198822 CDS Human protein_coding chr7:86415664 chr7:86415665 nonsynonymous SNV 0.987 5 22 hPsi_associated_SNPs_4160 0 0 0 0 1 Endoplasmic reticulum 0.438718459583362 0.438718768371757 0 0 hPsi_site_9577 iPseU_CNN:0;iRNA_PseU:0 9578 chr11 61608124 61608124 1 + A C KIRC 61608123 + 61608103 61608143 41 CTGGATGGCTGCAACATGATTATGGCCACCTGTCTGTCTAC CTGGATGGCTGCAACATGATTCTGGCCACCTGTCTGTCTAC < 41bp 0.84625556322953 0.488430995826172 0.85055983 0.73049533 prediction 0.69251112645906 Functional Loss - FADS2 ENSG00000134824 CDS Human protein_coding chr11:61608123 chr11:61608124 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_4161 0 0 1 0 2 Ribosome 0.438718593003602 0.438718593004892 0.240129 0 hPsi_site_9578 iPseU_CNN:0.240129;iRNA_PseU:0 9579 chr3 46306968 46306968 1 + A G LIHC 46306967 + 46306947 46306987 41 GTTTTTGGCCATGGCATGTGTAAGCTCCTCTCAGGGTTTTA GTTTTTGGCCATGGCATGTGTGAGCTCCTCTCAGGGTTTTA < 41bp 0.846252377728769 0.445153468069157 0.68960506 0.39363632 prediction 0.692504755457539 Functional Loss - CCR3 ENSG00000183625 CDS Human protein_coding chr3:46306967 chr3:46306968 nonsynonymous SNV 0.305 4 22 hPsi_associated_SNPs_4162 0 0 0 0 0 exosome 0.438718450061258 0.438718595544255 0.37921012 0 hPsi_site_9579 iPseU_CNN:0.37921012;iRNA_PseU:0 9580 chr3 3888034 3888034 1 + A G UCEC 3888033 + 3888013 3888053 41 TTGATAACCCTCACATAACATATACTGCCAGGGTCCCAGTC TTGATAACCCTCACATAACATGTACTGCCAGGGTCCCAGTC < 41bp 0.846229402034482 0.470475994652501 0.24619049 0.19656575 prediction 0.692458804068964 Functional Loss - LRRN1 ENSG00000175928 CDS Human protein_coding chr3:3888033 chr3:3888034 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_4163 0 0 1 0 0 Cytosol 0.438718432055631 0.438718590218021 0 0 hPsi_site_9580 iPseU_CNN:0;iRNA_PseU:0 9581 chr1 155717677 155717677 1 + A G rs148065907 155717676 + 155717656 155717696 41 GGGGCCTGCTACCTGGTCCCTACCATCGTGGGGTGAGTGGA GGGGCCTGCTACCTGGTCCCTGCCATCGTGGGGTGAGTGGA < 41bp 0.858948494928666 0.512725201747924 0.33161324 0.2580973 prediction 0.692446586361483 Functional Loss - MSTO2P ENSG00000125459 CDS Human protein_coding chr1:155717676 chr1:155717677 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4164 0 0 1 0 0 unknown 0.438717879756241 0.438718584103755 0 0 hPsi_site_9581 iPseU_CNN:0;iRNA_PseU:0 9582 chr4 164272119 164272119 1 + A G STAD 164272118 + 164272098 164272138 41 GTTTGTCTTACTGTAAGTCATACAAGTGTCTGCAGAAGTAT GTTTGTCTTACTGTAAGTCATGCAAGTGTCTGCAGAAGTAT < 41bp 0.8461357624038 0.477655353440422 0.30756825 0.24372327 prediction 0.692271524807601 Functional Loss - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272118 chr4:164272119 nonsynonymous SNV 0.045 1 22 hPsi_associated_SNPs_4165 0 0 0 0 0 unknown 0.438731081770697 0.438986132345651 0 0 hPsi_site_9582 iPseU_CNN:0;iRNA_PseU:0 9583 chr8 67341994 67341994 1 + A G ESCA 67341993 + 67341973 67342013 41 AGCGCGGCCGGCTTGCACCCTACCGGACACCAGAGTAAGGA AGCGCGGCCGGCTTGCACCCTGCCGGACACCAGAGTAAGGA < 41bp 0.885322264744719 0.539229136070138 0.7538477 0.28159982 prediction 0.692186257349162 Functional Loss - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341993 chr8:67341994 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_4166 0 0 1 0 0 exosome 0.438718592619335 0.438718592679416 0.5076954 0 hPsi_site_9583 iPseU_CNN:0.5076954;iRNA_PseU:0 9584 chr19 49206286 49206286 1 + A G rs1800021 49206285 + 49206265 49206305 41 TTTGTCTTTACGGTTTCCACTATATTTCACGTTCAGCAGCG TTTGTCTTTACGGTTTCCACTGTATTTCACGTTCAGCAGCG < 41bp 0.846084114417449 0.466182547526155 0.28749192 0.2054857 prediction 0.692168228834897 Functional Loss - FUT2 ENSG00000176920 CDS Human protein_coding chr19:49206285 chr19:49206286 nonsynonymous SNV 0.267 1 22 hPsi_associated_SNPs_4167 0 0 0 0 1 Nucleus 0.438716750040951 0.4387183603029 0 0 hPsi_site_9584 iPseU_CNN:0;iRNA_PseU:0 9585 chr1 35579051 35579051 1 + A G BLCA 35579050 + 35579030 35579070 41 TGGAGCTGTCAGTGACGATTTATCTATTCATTCGAAACAGA TGGAGCTGTCAGTGACGATTTGTCTATTCATTCGAAACAGA < 41bp 0.846072576755924 0.470060754085914 0.33499438 0.35171247 prediction 0.692145153511848 Functional Loss - ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35579050 chr1:35579051 synonymous SNV . 0 22 hPsi_associated_SNPs_4168 0 0 1 0 0 Cytosol 0.437385865283481 0.438724147741539 0 0 hPsi_site_9585 iPseU_CNN:0;iRNA_PseU:0 9586 chr2 177017669 177017669 1 + A G LGG 177017668 + 177017648 177017688 41 ACACGGACCTGACGACCTTATAGAAGTGGGGACCCTGGGCC ACACGGACCTGACGACCTTATGGAAGTGGGGACCCTGGGCC < 41bp 0.84595251399526 0.47443254992054 0.3539437 0.234566 prediction 0.691905027990519 Functional Loss - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177017668 chr2:177017669 stoploss 1.000 0 22 hPsi_associated_SNPs_4169 0 0 1 0 0 exosome 0.438718593020403 0.438252410488278 0 0 hPsi_site_9586 iPseU_CNN:0;iRNA_PseU:0 9587 chr9 129567343 129567343 1 + A G rs12686174 129567342 + 129567322 129567362 41 TCTGTTGCGGCAGCTGAGGCTACAACAGGCCTGCGCCGGCG TCTGTTGCGGCAGCTGAGGCTGCAACAGGCCTGCGCCGGCG < 41bp 0.845927137442479 0.487704317213055 0.4944339 0.31565195 prediction 0.691854274884958 Functional Loss - ZBTB43 ENSG00000169155 UTR5 Human protein_coding chr9:129567342 chr9:129567343 . . 0 22 hPsi_associated_SNPs_4170 0 0 1 0 1 Cytosol 0.43871859182462 0.438718554203426 0 0 hPsi_site_9587 iPseU_CNN:0;iRNA_PseU:0 9588 chr10 102684587 102684587 1 + A G OV 102684586 + 102684566 102684606 41 GTGATGAAGAAAGTTTAGGTTACAACCTAGACAGTGATGAG GTGATGAAGAAAGTTTAGGTTGCAACCTAGACAGTGATGAG < 41bp 0.880213000862924 0.534289162351279 0.9502934 0.44047552 prediction 0.691847677023291 Functional Loss - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684586 chr10:102684587 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4171 0 0 1 0 0 Nucleus 0.438716974106581 0.438720518185384 0.9005868 0 hPsi_site_9588 iPseU_CNN:0.9005868;iRNA_PseU:0 9589 chr11 5475451 5475451 1 + A G OV 5475450 + 5475430 5475470 41 CTCAACACATGTGTGTCACATATCCTGGCTGTACTTGCATT CTCAACACATGTGTGTCACATGTCCTGGCTGTACTTGCATT < 41bp 0.845922583719374 0.492260127488952 0.32317895 0.24816653 prediction 0.691845167438748 Functional Loss - OR51I2 ENSG00000187918 CDS Human protein_coding chr11:5475450 chr11:5475451 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_4172 0 0 0 0 0 nucleus 0.4393404324001 0.437639504623473 0 0 hPsi_site_9589 iPseU_CNN:0;iRNA_PseU:0 9590 chr7 138261140 138261140 1 + A C OV 138261139 + 138261119 138261159 41 ACCTGTTACTATGACTAGTGTACACCCCCCAATACGTTCAC ACCTGTTACTATGACTAGTGTCCACCCCCCAATACGTTCAC < 41bp 0.852702724304685 0.506781540694379 0.49641156 0.31628007 prediction 0.691842367220613 Functional Loss - TRIM24 ENSG00000122779 CDS Human protein_coding chr7:138261139 chr7:138261140 synonymous SNV . 0 22 hPsi_associated_SNPs_4173 0 0 1 0 2 Cytosol 0.438645926518733 0.43873017396873 0 0 hPsi_site_9590 iPseU_CNN:0;iRNA_PseU:0 9591 chr4 26741549 26741549 1 + A G UCEC 26741548 + 26741528 26741568 41 ATCAGATATTCCGTGAGATGTATGTGCGTTTTTTCTTCAGA ATCAGATATTCCGTGAGATGTGTGTGCGTTTTTTCTTCAGA < 41bp 0.84589832035965 0.463812294512111 0.4034451 0.38786694 prediction 0.691796640719301 Functional Loss - TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26741548 chr4:26741549 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_4174 0 0 0 0 2 Endoplasmic reticulum 0.438787650172944 0.438910296951703 0 0 hPsi_site_9591 iPseU_CNN:0;iRNA_PseU:0 9592 chr3 119526249 119526249 1 + A G HNSC 119526248 + 119526228 119526268 41 GTGGGGACAAGGCCACTGGCTATCACTTCAATGTCATGACA GTGGGGACAAGGCCACTGGCTGTCACTTCAATGTCATGACA < 41bp 0.845869988977837 0.443201569021607 0.30301398 0.20677724 prediction 0.691739977955674 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119526248 chr3:119526249 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_4175 0 0 0 0 1 nucleus 0.438718591650414 0.438718589579509 0 0 hPsi_site_9592 iPseU_CNN:0;iRNA_PseU:0 9593 chr13 51936035 51936035 1 + A G STAD 51936034 + 51936014 51936054 41 AGAGAACCTAACACAGGTATTACAGTATTTTTTGACAGGAT AGAGAACCTAACACAGGTATTGCAGTATTTTTTGACAGGAT < 41bp 0.879493980168039 0.533649249826084 0.21688509 0.24682564 prediction 0.691689460683909 Functional Loss - SERPINE3 ENSG00000253309 CDS Human protein_coding chr13:51936034 chr13:51936035 nonsynonymous SNV 0.025 1 22 hPsi_associated_SNPs_4176 0 0 0 0 1 nucleus 0.438688153764049 0.438707486796073 0 0 hPsi_site_9593 iPseU_CNN:0;iRNA_PseU:0 9594 chr19 40882661 40882661 1 + A G STAD 40882660 + 40882640 40882680 41 GCTGCCCTGCGTGACAACCATACCCACTCTGACATCCAGGT GCTGCCCTGCGTGACAACCATGCCCACTCTGACATCCAGGT < 41bp 0.845837573778392 0.44526916595295 0.3241837 0.21552235 prediction 0.691675147556783 Functional Loss - PLD3 ENSG00000105223 CDS Human protein_coding chr19:40882660 chr19:40882661 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_4177 0 0 1 0 1 Endoplasmic reticulum 0.438958330415399 0.438731574715168 0 0 hPsi_site_9594 iPseU_CNN:0;iRNA_PseU:0 9595 chr12 49220598 49220598 1 + A G UCEC 49220597 + 49220577 49220617 41 ACAGATGAAGCACCTGACCGTACAGATGATGGCATATGATA ACAGATGAAGCACCTGACCGTGCAGATGATGGCATATGATA < 41bp 0.895441158146535 0.549604918477744 0.73029494 0.29176247 prediction 0.69167247933758 Functional Loss - CACNB3 ENSG00000167535 CDS Human protein_coding chr12:49220597 chr12:49220598 synonymous SNV . 0 22 hPsi_associated_SNPs_4178 0 0 1 0 2 Ribosome 0.438491545571881 0.438774720551126 0.46058988 0 hPsi_site_9595 iPseU_CNN:0.46058988;iRNA_PseU:0 9596 chr11 58385905 58385905 1 + A G rs372373981 58385904 + 58385884 58385924 41 ATAGGGAGGGGGCTGCCCTCTACAGTCTCTTTGACTGTAAG ATAGGGAGGGGGCTGCCCTCTGCAGTCTCTTTGACTGTAAG < 41bp 0.845833807366289 0.472441206964986 0.64065623 0.5074996 prediction 0.691667614732578 Functional Loss - ZFP91-CNTF ENSG00000186660 UTR3 Human protein_coding chr11:58385904 chr11:58385905 . . 0 22 hPsi_associated_SNPs_4179 0 0 1 0 0 exosome 0.438718198431986 0.438718556296844 0.26631326 0 hPsi_site_9596 iPseU_CNN:0.26631326;iRNA_PseU:0 9597 chr1 107973446 107973446 1 + A G UCEC 107973445 + 107973425 107973465 41 ACAGTCATTTGCGTGAGCTGTAAACACAACACTAGAGGGCA ACAGTCATTTGCGTGAGCTGTGAACACAACACTAGAGGGCA < 41bp 0.851756933938838 0.505986894119221 0.41855526 0.1799311 prediction 0.691540079639234 Functional Loss - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107973445 chr1:107973446 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4180 0 0 0 0 2 exosome 0.438640092434301 0.437463047671652 0 0 hPsi_site_9597 iPseU_CNN:0;iRNA_PseU:0 9598 chr7 149427638 149427638 1 + A G COAD 149427637 + 149427617 149427657 41 CCAGGAGAACAGAGCCCAGGTACTGCAGCGGCCTCGGTGCA CCAGGAGAACAGAGCCCAGGTGCTGCAGCGGCCTCGGTGCA < 41bp 0.845761245614287 0.447900087129737 0.70492387 0.4028161 prediction 0.691522491228574 Functional Loss - KRBA1 ENSG00000133619 CDS Human protein_coding chr7:149427637 chr7:149427638 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4181 0 0 1 0 1 Cytosol 0.438718455792628 0.438714552837581 0.40984774 0 hPsi_site_9598 iPseU_CNN:0.40984774;iRNA_PseU:0 9599 chr3 62317026 62317026 1 + A G STAD 62317025 + 62317005 62317045 41 AGAAGCAGCAGAAAAGTCACTACAGACCAGGATTCACCCAC AGAAGCAGCAGAAAAGTCACTGCAGACCAGGATTCACCCAC < 41bp 0.845746013278668 0.441869255349087 0.2780681 0.26389843 prediction 0.691492026557336 Functional Loss - C3orf14 ENSG00000114405 CDS Human protein_coding chr3:62317025 chr3:62317026 synonymous SNV . 0 22 hPsi_associated_SNPs_4182 0 0 1 0 2 exosome 0.438722057776995 0.438719406326673 0 0 hPsi_site_9599 iPseU_CNN:0;iRNA_PseU:0 9600 chr12 55615677 55615677 1 + A G LUSC 55615676 + 55615656 55615696 41 CTATGCTAAACCCCATCATCTACGGCCTGAGGAACAATGAA CTATGCTAAACCCCATCATCTGCGGCCTGAGGAACAATGAA < 41bp 0.863969104677016 0.518275244333072 0.4173928 0.317159 prediction 0.691387720687888 Functional Loss - OR10A7 ENSG00000179919 CDS Human protein_coding chr12:55615676 chr12:55615677 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_4183 0 0 0 0 0 unknown 0.438718588130834 0.438718599081991 0 0 hPsi_site_9600 iPseU_CNN:0;iRNA_PseU:0 9601 chr3 17053595 17053595 1 + A G UCEC 17053594 + 17053574 17053614 41 GATTAAAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC GATTAAAACCGTGGATGAGGTGTTCAAGAATGCCCAGCCCC < 41bp 0.870301230473113 0.524630409533297 0.83249354 0.35445657 prediction 0.691341641879633 Functional Loss - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17053594 chr3:17053595 synonymous SNV . 0 22 hPsi_associated_SNPs_4184 0 0 1 0 1 nucleus 0.438718592995096 0.438718592995102 0.66498708 0 hPsi_site_9601 iPseU_CNN:0.66498708;iRNA_PseU:0 9602 chr5 179287507 179287507 1 + A G rs544376915 179287506 + 179287486 179287526 41 GAAAACATCCTGCTTCTTGTTAGCTCACCTCCAGTTTCCAA GAAAACATCCTGCTTCTTGTTGGCTCACCTCCAGTTTCCAA < 41bp 0.845659349666925 0.478016191091037 0.6029649 0.2951215 prediction 0.691318699333851 Functional Loss - LOC100996419 ENSG00000245317 CDS Human lincRNA chr5:179287506 chr5:179287507 synonymous SNV . 0 22 hPsi_associated_SNPs_4185 0 0 0 0 0 unknown 0.438718732370396 0.43869128010807 0.2059298 0 hPsi_site_9602 iPseU_CNN:0.2059298;iRNA_PseU:0 9603 chr1 154947241 154947241 1 + A G LUSC 154947240 + 154947220 154947260 41 TCATGTCGCACAAACAAATTTACTATTCGGACAAATACGAC TCATGTCGCACAAACAAATTTGCTATTCGGACAAATACGAC < 41bp 0.845658381162073 0.460181760381123 0.50549686 0.34221154 prediction 0.691316762324146 Functional Loss - CKS1B ENSG00000173207 CDS Human protein_coding chr1:154947240 chr1:154947241 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4186 0 0 1 0 1 Ribosome 0.438620905753708 0.436907750170745 0.0109937200000001 0 hPsi_site_9603 iPseU_CNN:0.0109937200000001;iRNA_PseU:0 9604 chr19 35862770 35862770 1 + A G UCEC 35862769 + 35862749 35862789 41 AGGGCACCAATGGGACCTGCTACCTGGAGTTCTGGAAGGAC AGGGCACCAATGGGACCTGCTGCCTGGAGTTCTGGAAGGAC < 41bp 0.869440640513045 0.523864497687115 0.34462026 0.13613507 prediction 0.691152285651861 Functional Loss - GPR42 ENSG00000126251 CDS Human protein_coding chr19:35862769 chr19:35862770 nonsynonymous SNV 0.270 4 22 hPsi_associated_SNPs_4187 0 0 0 0 0 exosome 0.438718592995224 0.438718592998299 0 0 hPsi_site_9604 iPseU_CNN:0;iRNA_PseU:0 9605 chr7 73790976 73790976 1 + A G UCEC 73790975 + 73790955 73790995 41 TACCGGGGCCAGGCGCAGGCTATCGAGTTCCTCAAGGAGCA TACCGGGGCCAGGCGCAGGCTGTCGAGTTCCTCAAGGAGCA < 41bp 0.845575262746411 0.440703809044997 0.7173665 0.3680672 prediction 0.691150525492822 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790975 chr7:73790976 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_4188 0 0 0 0 0 Ribosome 0.438718592995397 0.43871859300198 0.434733 0 hPsi_site_9605 iPseU_CNN:0.434733;iRNA_PseU:0 9606 chr17 17910396 17910396 1 + A G HNSC 17910395 + 17910375 17910415 41 GAGAAGCTCCTGGAGATCTCTATCAGCACCCTGGAGAAGAT GAGAAGCTCCTGGAGATCTCTGTCAGCACCCTGGAGAAGAT < 41bp 0.845555725571708 0.43645636190626 0.7028039 0.5287826 prediction 0.691111451143416 Functional Loss - DRC3 ENSG00000171962 CDS Human protein_coding chr17:17910395 chr17:17910396 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_4189 0 0 0 0 1 Cytosol 0.439479886269173 0.440719453040565 0.3480426 0 hPsi_site_9606 iPseU_CNN:0.3480426;iRNA_PseU:0 9607 chr11 4566579 4566579 1 + A G CESC 4566578 + 4566558 4566598 41 CATCCTGGCTGTGGTAAAGATAGAACGCAGCCTGCACCAGC CATCCTGGCTGTGGTAAAGATGGAACGCAGCCTGCACCAGC < 41bp 0.872975600366406 0.52742687157933 0.49866188 0.2699466 prediction 0.691097457574153 Functional Loss - OR52M1 ENSG00000197790 CDS Human protein_coding chr11:4566578 chr11:4566579 nonsynonymous SNV 0.865 0 22 hPsi_associated_SNPs_4190 0 0 0 0 0 unknown 0.438795622102415 0.438718337884776 0 0 hPsi_site_9607 iPseU_CNN:0;iRNA_PseU:0 9608 chr1 154983401 154983401 1 + A G UCEC 154983400 + 154983380 154983420 41 CATCCCTGGCAGGAAGATGTTACAGCCTGGTCCTCATCCTC CATCCCTGGCAGGAAGATGTTGCAGCCTGGTCCTCATCCTC < 41bp 0.845535991119903 0.455794188519315 0.7159059 0.4022333 prediction 0.691071982239806 Functional Loss - ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154983400 chr1:154983401 synonymous SNV . 0 22 hPsi_associated_SNPs_4191 0 0 0 0 2 chromatin 0.438715234316108 0.438718220649476 0.4318118 0 hPsi_site_9608 iPseU_CNN:0.4318118;iRNA_PseU:0 9609 chr17 15878262 15878262 1 + A G LIHC 15878261 + 15878241 15878281 41 TGCTTATAATGCTGGTGATCTACATTAAGATCTTCCTGGTG TGCTTATAATGCTGGTGATCTGCATTAAGATCTTCCTGGTG < 41bp 0.885718566900456 0.540187390453951 0.24654782 0.21650559 prediction 0.69106235289301 Functional Loss - ADORA2B ENSG00000170425 CDS Human protein_coding chr17:15878261 chr17:15878262 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4192 0 0 1 0 0 Ribosome 0.439850748004819 0.438701877594081 0 0 hPsi_site_9609 iPseU_CNN:0;iRNA_PseU:0 9610 chr12 2910398 2910398 1 + A G ACC 2910397 + 2910377 2910417 41 TCCAGAAGGTCCTGCAGCTCTACCCCAACAACAAAGCCGCC TCCAGAAGGTCCTGCAGCTCTGCCCCAACAACAAAGCCGCC < 41bp 0.845520037575999 0.434827335154938 0.7544273 0.29885533 prediction 0.691040075151997 Functional Loss - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2910397 chr12:2910398 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4193 0 0 1 0 0 Ribosome 0.438744526830523 0.43867744951356 0.5088546 0 hPsi_site_9610 iPseU_CNN:0.5088546;iRNA_PseU:0 9611 chr9 139744582 139744582 1 + A G KIRP 139744581 + 139744561 139744601 41 AGAAGATTCACGTGTACGGCTATTCCATGGTGAGCCGCAGC AGAAGATTCACGTGTACGGCTGTTCCATGGTGAGCCGCAGC < 41bp 0.845500658404384 0.460360573174506 0.4660515 0.37260324 prediction 0.691001316808767 Functional Loss - PHPT1 ENSG00000054148 CDS Human protein_coding chr9:139744581 chr9:139744582 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_4194 0 0 1 0 1 Ribosome 0.438674559310382 0.438283435118396 0 0 hPsi_site_9611 iPseU_CNN:0;iRNA_PseU:0 9612 chr19 36244166 36244166 1 + A G rs557788338 36244165 + 36244145 36244185 41 GGATGAGGAGGTGGGATGGGTAGTGGGTCCCAGCCCAGCAG GGATGAGGAGGTGGGATGGGTGGTGGGTCCCAGCCCAGCAG < 41bp 0.845470433679714 0.469941591199506 0.78177094 0.36874682 prediction 0.690940867359429 Functional Loss - LIN37 ENSG00000267439 ncRNA_exonic Human antisense chr19:36244165 chr19:36244166 . . 0 22 hPsi_associated_SNPs_4195 0 0 1 0 0 Cytosol 0.43869828945092 0.43871859316252 0.56354188 0 hPsi_site_9612 iPseU_CNN:0.56354188;iRNA_PseU:0 9613 chr20 34526744 34526744 1 + A G LUSC 34526743 + 34526723 34526763 41 GCAAGGAGGAAGCTCCAAGCTATAGAACTTTGAACGGGGCA GCAAGGAGGAAGCTCCAAGCTGTAGAACTTTGAACGGGGCA < 41bp 0.893664541726706 0.548194958709541 0.29474586 0.23461169 prediction 0.69093916603433 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526743 chr20:34526744 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4196 0 0 1 0 0 Nucleus 0.438718592995217 0.438718595166785 0 0 hPsi_site_9613 iPseU_CNN:0;iRNA_PseU:0 9614 chr11 59211002 59211002 1 + A G LUAD 59211001 + 59210981 59211021 41 GAGTGCCTCCTCCTGACTGCTATGGCATACGACCGATATGC GAGTGCCTCCTCCTGACTGCTGTGGCATACGACCGATATGC < 41bp 0.8454678017328 0.457255471501899 0.38434502 0.27438235 prediction 0.690935603465601 Functional Loss - OR5A1 ENSG00000172320 CDS Human protein_coding chr11:59211001 chr11:59211002 nonsynonymous SNV 0.158 4 22 hPsi_associated_SNPs_4197 0 0 0 0 0 unknown 0.438718455683551 0.438716933594308 0 0 hPsi_site_9614 iPseU_CNN:0;iRNA_PseU:0 9615 chr6 27356867 27356867 1 + A G rs4713091 27356866 + 27356846 27356886 41 GGGACCAAGGTGGGTGCTCTTAGAGGTTCTGGAAAGCGGAA GGGACCAAGGTGGGTGCTCTTGGAGGTTCTGGAAAGCGGAA < 41bp 0.845463200748907 0.473542817676102 0.50389856 0.30605972 prediction 0.690926401497815 Functional Loss - ZNF391 ENSG00000124613 intronic Human protein_coding chr6:27356866 chr6:27356867 . . 0 22 hPsi_associated_SNPs_4198 0 0 0 0 0 nucleolus 0.438718592994292 0.438718592994747 0.00779711999999999 0 hPsi_site_9615 iPseU_CNN:0.00779711999999999;iRNA_PseU:0 9616 chr11 6415557 6415557 1 + A G CESC 6415556 + 6415536 6415576 41 TACCGCACTGGCAGCTTCTCTACAGGGCTCGAGAAACCTAT TACCGCACTGGCAGCTTCTCTGCAGGGCTCGAGAAACCTAT < 41bp 0.845455325099937 0.460860421072005 0.40771002 0.20677474 prediction 0.690910650199875 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415556 chr11:6415557 nonsynonymous SNV 0.980 5 22 hPsi_associated_SNPs_4199 0 0 1 0 0 Endoplasmic reticulum 0.438781937978626 0.438865135596068 0 0 hPsi_site_9616 iPseU_CNN:0;iRNA_PseU:0 9617 chr7 63809040 63809040 1 + A G UCEC 63809039 + 63809019 63809059 41 GAAGAATGTGGCAAAGCCTTTAAGTGCTTCTCAGACCTTAC GAAGAATGTGGCAAAGCCTTTGAGTGCTTCTCAGACCTTAC < 41bp 0.845431707379326 0.465517967020926 0.5132631 0.23182076 prediction 0.690863414758653 Functional Loss - ZNF736 ENSG00000234444 CDS Human protein_coding chr7:63809039 chr7:63809040 nonsynonymous SNV 0.861 1 22 hPsi_associated_SNPs_4200 0 0 0 0 0 nucleus 0.438718439203456 0.438668621366372 0.0265261999999999 0 hPsi_site_9617 iPseU_CNN:0.0265261999999999;iRNA_PseU:0 9618 chr19 37733610 37733610 1 + A G STAD 37733609 + 37733589 37733629 41 TTTATTCAACAGACATTCCTTACTCTCCATCAAATAATTAA TTTATTCAACAGACATTCCTTGCTCTCCATCAAATAATTAA < 41bp 0.845431256623998 0.466430830770802 0.41956913 0.20944446 prediction 0.690862513247996 Functional Loss - ZNF383 ENSG00000188283 CDS Human protein_coding chr19:37733609 chr19:37733610 nonsynonymous SNV 0.419 0 22 hPsi_associated_SNPs_4201 0 0 1 0 0 cytosol 0.438564540422512 0.438279113108378 0 0 hPsi_site_9618 iPseU_CNN:0;iRNA_PseU:0 9619 chr2 109116150 109116150 1 + A G HNSC 109116149 + 109116129 109116169 41 AGAGAGAGACTTCTTCCTGTTATAAATACGATGTTGCAGCT AGAGAGAGACTTCTTCCTGTTGTAAATACGATGTTGCAGCT < 41bp 0.874993425303333 0.529584923118358 0.7878615 0.58864677 prediction 0.69081700436995 Functional Loss - GCC2 ENSG00000135968 CDS Human protein_coding chr2:109116149 chr2:109116150 nonsynonymous SNV 0.714 1 22 hPsi_associated_SNPs_4202 0 0 0 0 1 chromatin 0.438827129588988 0.439167231652022 0.39842946 0 hPsi_site_9619 iPseU_CNN:0.39842946;iRNA_PseU:0 9620 chr14 24026082 24026082 1 + A G UCEC 24026081 + 24026061 24026101 41 GGGTCACCTTCCGAGACACCTACTATGACACCCCTGAGCTG GGGTCACCTTCCGAGACACCTGCTATGACACCCCTGAGCTG < 41bp 0.845405271282729 0.472592553702205 0.43898925 0.23484671 prediction 0.690810542565457 Functional Loss - THTPA ENSG00000259431 CDS Human protein_coding chr14:24026081 chr14:24026082 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4203 0 0 1 0 0 Cytosol 0.438600841061841 0.438718673475061 0 0 hPsi_site_9620 iPseU_CNN:0;iRNA_PseU:0 9621 chr8 22049614 22049614 1 + A G LGG 22049613 + 22049593 22049633 41 ACCGCAGCCGCCTGTGCTGGTACGACTATGTGGAGGTCCGA ACCGCAGCCGCCTGTGCTGGTGCGACTATGTGGAGGTCCGA < 41bp 0.888606122215484 0.543255031169742 0.8538382 0.3969543 prediction 0.690702182091484 Functional Loss - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22049613 chr8:22049614 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_4204 0 0 1 0 2 Endoplasmic reticulum 0.438718550106774 0.438718593382318 0.7076764 0 hPsi_site_9621 iPseU_CNN:0.7076764;iRNA_PseU:0 9622 chr8 21827021 21827021 1 + A G STAD 21827020 + 21827000 21827040 41 TACTCCCAGTTACTGGCAGCTACATGCCTTACCAAGCTTGT TACTCCCAGTTACTGGCAGCTGCATGCCTTACCAAGCTTGT < 41bp 0.84534853547632 0.443494955976515 0.69648874 0.28087097 prediction 0.690697070952641 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21827020 chr8:21827021 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4205 0 0 1 2 2 Cytosol 0.438718586752625 0.438718591541859 0.39297748 0 hPsi_site_9622 iPseU_CNN:0.39297748;iRNA_PseU:0 9623 chr2 182783550 182783550 1 + A G rs78894663 182783549 + 182783529 182783569 41 TAGAACACAAATGATGGATTTAGAATTGGCAATGCTGCGTC TAGAACACAAATGATGGATTTGGAATTGGCAATGCTGCGTC < 41bp 0.845335157646984 0.454034892526102 0.3425711 0.24677056 prediction 0.690670315293968 Functional Loss - SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182783549 chr2:182783550 synonymous SNV . 0 22 hPsi_associated_SNPs_4206 0 0 1 0 2 Ribosome 0.438831634526544 0.438718594093622 0 0 hPsi_site_9623 iPseU_CNN:0;iRNA_PseU:0 9624 chr17 25636147 25636147 1 + A G UCEC 25636146 + 25636126 25636166 41 GTTTTCCTTTGGAATATGGATAAATACACCATGATACGGAA GTTTTCCTTTGGAATATGGATGAATACACCATGATACGGAA < 41bp 0.863409305173096 0.518076023566702 0.7961509 0.40192506 prediction 0.690666563212789 Functional Loss - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25636146 chr17:25636147 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4207 0 0 1 0 1 Cytosol 0.438738971710121 0.438876170871808 0.5923018 0 hPsi_site_9624 iPseU_CNN:0.5923018;iRNA_PseU:0 9625 chr16 1365684 1365684 1 + A G COAD 1365683 + 1365663 1365703 41 GGAAGGAGGCTTGTTTAAACTACGGATGCTTTTCAAAGATG GGAAGGAGGCTTGTTTAAACTGCGGATGCTTTTCAAAGATG < 41bp 0.889392516469899 0.544065458848505 0.43515587 0.23138198 prediction 0.690654115242787 Functional Loss - UBE2I ENSG00000103275 CDS Human protein_coding chr16:1365683 chr16:1365684 synonymous SNV . 0 22 hPsi_associated_SNPs_4208 0 0 1 0 2 Ribosome 0.438718591476474 0.438718591915057 0 0 hPsi_site_9625 iPseU_CNN:0;iRNA_PseU:0 9626 chr7 39612284 39612284 1 + A G PRAD 39612283 + 39612263 39612303 41 GGGCCTATCAGTAGATGTATTACAACACCTCAAACAACTAT GGGCCTATCAGTAGATGTATTGCAACACCTCAAACAACTAT < 41bp 0.845297126388138 0.483935112628416 0.68018585 0.46765745 prediction 0.690594252776275 Functional Loss - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39612283 chr7:39612284 synonymous SNV . 0 22 hPsi_associated_SNPs_4209 0 0 1 0 0 Ribosome 0.43889801570639 0.439144715166046 0.3603717 0 hPsi_site_9626 iPseU_CNN:0.3603717;iRNA_PseU:0 9627 chr7 143632752 143632752 1 + A G ACC 143632751 + 143632731 143632771 41 ATGCATGGAGGGCTGTGTGCTAGGTTGGCCATCACATCCTG ATGCATGGAGGGCTGTGTGCTGGGTTGGCCATCACATCCTG < 41bp 0.882211099193505 0.53693824652502 0.22641024 0.18016374 prediction 0.69054570533697 Functional Loss - OR2F2 ENSG00000221910 CDS Human protein_coding chr7:143632751 chr7:143632752 nonsynonymous SNV 0.018 1 22 hPsi_associated_SNPs_4210 0 0 0 0 0 unknown 0.43878070682028 0.438737043269076 0 0 hPsi_site_9627 iPseU_CNN:0;iRNA_PseU:0 9628 chr20 25655717 25655717 1 + A G UCEC 25655716 + 25655696 25655736 41 GTACAAAAACGCTTCTCACGTAAGTGTCTCTTTAAGTGCTT GTACAAAAACGCTTCTCACGTGAGTGTCTCTTTAAGTGCTT < 41bp 0.8627179426305 0.517451080478361 0.62741566 0.33599967 prediction 0.690533724304277 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25655716 chr20:25655717 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4211 0 0 1 1 0 Cytosol 0.425639160958804 0.411443284791122 0.25483132 0 hPsi_site_9628 iPseU_CNN:0.25483132;iRNA_PseU:0 9629 chr10 95557288 95557288 1 + A G LGG 95557287 + 95557267 95557307 41 GGAGGCTCCTCGTTCCAGGATATTCAGAGGATGCCATCGCG GGAGGCTCCTCGTTCCAGGATGTTCAGAGGATGCCATCGCG < 41bp 0.845240779664842 0.455142117015266 0.53327304 0.32805055 prediction 0.690481559329684 Functional Loss - LGI1 ENSG00000108231 CDS Human protein_coding chr10:95557287 chr10:95557288 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_4212 0 0 0 0 0 exosome 0.438718588505451 0.438718404547648 0.06654608 0 hPsi_site_9629 iPseU_CNN:0.06654608;iRNA_PseU:0 9630 chr19 12975716 12975716 1 + A C UCEC 12975715 + 12975695 12975735 41 AGACGGTGCTAGCCCTGGAGTATTTGCACAACTATGGCATC AGACGGTGCTAGCCCTGGAGTCTTTGCACAACTATGGCATC < 41bp 0.84523130012439 0.496005270166928 0.4295935 0.32027608 prediction 0.690462600248779 Functional Loss - MAST1 ENSG00000105613 CDS Human protein_coding chr19:12975715 chr19:12975716 nonsynonymous SNV 0.601 4 22 hPsi_associated_SNPs_4213 0 0 0 0 2 Endoplasmic reticulum 0.438708278165893 0.438708630133801 0 0 hPsi_site_9630 iPseU_CNN:0;iRNA_PseU:0 9631 chr7 73280202 73280202 1 + A G rs116364220 73280201 + 73280181 73280221 41 AGCAAGAAACTCCCAGAGAATAAATGTATCCCCATCTGCCT AGCAAGAAACTCCCAGAGAATGAATGTATCCCCATCTGCCT < 41bp 0.847913078640734 0.50268486033825 0.29730994 0.24642074 prediction 0.690456436604968 Functional Loss - TMEM270 ENSG00000175877 CDS Human protein_coding chr7:73280201 chr7:73280202 synonymous SNV . 0 22 hPsi_associated_SNPs_4214 0 0 0 0 0 unknown 0.43871859289345 0.438716862664406 0 0 hPsi_site_9631 iPseU_CNN:0;iRNA_PseU:0 9632 chr19 16146475 16146475 1 + A G UCEC 16146474 + 16146454 16146494 41 GAGACGACTGGGAACTTCACTAGACACGCATCCAGCCGGTT GAGACGACTGGGAACTTCACTGGACACGCATCCAGCCGGTT < 41bp 0.857450823296791 0.512233130074384 0.7800623 0.6121476 prediction 0.690435386444814 Functional Loss - LINC00905 ENSG00000167459;ENSG00000267609 ncRNA_exonic Human other chr19:16146474 chr19:16146475 . . 0 22 hPsi_associated_SNPs_4215 0 0 0 1 1 unknown 0.438718062905021 0.438722192821374 0.3358294 0 hPsi_site_9632 iPseU_CNN:0.3358294;iRNA_PseU:0 9633 chr7 150741191 150741191 1 + A G rs78465761 150741190 + 150741170 150741210 41 TGCAGAGTCCGAGCGGGTTGTACAGGAGGCCCTGGACCGGG TGCAGAGTCCGAGCGGGTTGTGCAGGAGGCCCTGGACCGGG < 41bp 0.84520792204623 0.439052032178595 0.67912096 0.31138575 prediction 0.690415844092459 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150741190 chr7:150741191 synonymous SNV . 0 22 hPsi_associated_SNPs_4216 0 0 1 0 1 Ribosome 0.438720272307926 0.438631264460455 0.35824192 0 hPsi_site_9633 iPseU_CNN:0.35824192;iRNA_PseU:0 9634 chr20 18496360 18496360 1 + A C OV 18496359 + 18496339 18496379 41 GAATTGATGCCCCAGTTTTCTACAATTGAGTACGTGATACA GAATTGATGCCCCAGTTTTCTCCAATTGAGTACGTGATACA < 41bp 0.847771378625389 0.502581534536336 0.27634373 0.20492145 prediction 0.690379688178106 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18496359 chr20:18496360 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_4217 0 0 1 0 2 Cytosol 0.439132604928754 0.438744089935039 0 0 hPsi_site_9634 iPseU_CNN:0;iRNA_PseU:0 9635 chr5 79743997 79743997 1 + A G COAD 79743996 + 79743976 79744016 41 GAACACAGGAAATGAGGGGTTACCTACTTCTGGTTCATTTA GAACACAGGAAATGAGGGGTTGCCTACTTCTGGTTCATTTA < 41bp 0.880876806782307 0.53572809229575 0.67186105 0.29468483 prediction 0.690297428973114 Functional Loss - ZFYVE16 ENSG00000039319 CDS Human protein_coding chr5:79743996 chr5:79743997 synonymous SNV . 0 22 hPsi_associated_SNPs_4218 0 0 1 0 0 Ribosome 0.438725268284415 0.438718832734299 0.3437221 0 hPsi_site_9635 iPseU_CNN:0.3437221;iRNA_PseU:0 9636 chr20 20013295 20013295 1 + A G HNSC 20013294 + 20013274 20013314 41 GGGAGCCTGATGAGGACGCTTATGGTAAGCTCCCTTCCATG GGGAGCCTGATGAGGACGCTTGTGGTAAGCTCCCTTCCATG < 41bp 0.845133810453194 0.456151369387704 0.57436943 0.43338543 prediction 0.690267620906388 Functional Loss - NAA20 ENSG00000173418 CDS Human protein_coding chr20:20013294 chr20:20013295 nonsynonymous SNV 0.967 3 22 hPsi_associated_SNPs_4219 0 0 1 0 1 Ribosome 0.438716360206707 0.438717149951639 0.14873886 0 hPsi_site_9636 iPseU_CNN:0.14873886;iRNA_PseU:0 Intraocular pressure 9637 chr7 148876208 148876208 1 + A G UCEC 148876207 + 148876187 148876227 41 CTCACCCATCAAGACTTACCTACCATCTTCGGGTCCATAAC CTCACCCATCAAGACTTACCTGCCATCTTCGGGTCCATAAC < 41bp 0.845132341219642 0.458614570928253 0.1790131 0.13460025 prediction 0.690264682439284 Functional Loss - ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876207 chr7:148876208 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_4220 0 0 1 0 0 chromatin 0.438710838561492 0.438794763538541 0 0 hPsi_site_9637 iPseU_CNN:0;iRNA_PseU:0 9638 chr20 25654670 25654670 1 + A G rs181575219 25654669 + 25654649 25654689 41 TGGTCCCCAGATCCCTATTTTACCACTTGTTTTGTCAGACT TGGTCCCCAGATCCCTATTTTGCCACTTGTTTTGTCAGACT < 41bp 0.845119167361752 0.493714585460319 0.27628773 0.2716791 prediction 0.690238334723504 Functional Loss - ZNF337-AS1 ENSG00000213742 ncRNA_exonic Human antisense chr20:25654669 chr20:25654670 . . 0 22 hPsi_associated_SNPs_4221 0 0 0 1 0 unknown 0.438716910554829 0.438707650351043 0 0 hPsi_site_9638 iPseU_CNN:0;iRNA_PseU:0 9639 chr3 41267290 41267290 1 + A G SKCM 41267289 + 41267269 41267309 41 TTGCTCAACAAAACAAATGTTAAATTCTTGGCTATTACGAC TTGCTCAACAAAACAAATGTTGAATTCTTGGCTATTACGAC < 41bp 0.845089542543817 0.448377749435656 0.647127 0.2803552 prediction 0.690179085087634 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41267289 chr3:41267290 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_4222 0 0 1 0 1 Nucleus 0.438718624602905 0.439030768712005 0.294254 0 hPsi_site_9639 iPseU_CNN:0.294254;iRNA_PseU:0 9640 chr5 176731740 176731740 1 + A G rs529728091 176731739 + 176731719 176731759 41 GCCACGCTGGGCCGAGCGACTATTTCCTGCCAATGTTGCTC GCCACGCTGGGCCGAGCGACTGTTTCCTGCCAATGTTGCTC < 41bp 0.845072902704637 0.470386829265997 0.3318633 0.2563823 prediction 0.690145805409274 Functional Loss - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176731739 chr5:176731740 synonymous SNV . 0 22 hPsi_associated_SNPs_4223 0 0 1 0 0 Cytosol 0.438718592306622 0.438718592199224 0 0 hPsi_site_9640 iPseU_CNN:0;iRNA_PseU:0 9641 chr20 42089474 42089474 1 + A G LIHC 42089473 + 42089453 42089493 41 GAAGCAGATCTAAGGATGAGTATGAGAAATCTCGAAGCAGG GAAGCAGATCTAAGGATGAGTGTGAGAAATCTCGAAGCAGG < 41bp 0.872687218252561 0.52763141162912 0.39762527 0.27318722 prediction 0.690111613246881 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089473 chr20:42089474 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4224 0 0 1 0 0 Nucleus 0.438717688489428 0.438718310009995 0 0 hPsi_site_9641 iPseU_CNN:0;iRNA_PseU:0 9642 chr5 71016481 71016481 1 + A G rs41271753 71016480 + 71016460 71016500 41 TCCATACATCCCCATCCCTCTACTTTCCCCAGAGGACCACA TCCATACATCCCCATCCCTCTGCTTTCCCCAGAGGACCACA < 41bp 0.850811013524894 0.505773857001115 0.54965967 0.2815725 prediction 0.690074313047557 Functional Loss - CARTPT ENSG00000164326 UTR3 Human protein_coding chr5:71016480 chr5:71016481 . . 0 22 hPsi_associated_SNPs_4225 0 0 0 2 0 exosome 0.438718593059864 0.438718592966335 0.0993193400000001 0 hPsi_site_9642 iPseU_CNN:0.0993193400000001;iRNA_PseU:0 9643 chr9 2081918 2081918 1 + A G COAD 2081917 + 2081897 2081937 41 AATGGGGCTTGGAAAGACCATACAGACCATTGCACTCATCA AATGGGGCTTGGAAAGACCATGCAGACCATTGCACTCATCA < 41bp 0.886339970425634 0.541309788287647 0.6100632 0.3471167 prediction 0.690060364275973 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2081917 chr9:2081918 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4226 0 0 0 0 2 Nucleus 0.438739692357366 0.439789892920636 0.2201264 0 hPsi_site_9643 iPseU_CNN:0.2201264;iRNA_PseU:0 9644 chr3 138187013 138187013 1 + A C SKCM 138187012 + 138186992 138187032 41 CTGGAGTGGCTTTCATTGCTTACTGACCAAGAAGTTCTGAC CTGGAGTGGCTTTCATTGCTTCCTGACCAAGAAGTTCTGAC < 41bp 0.845023119102425 0.489402075450475 0.36671022 0.32305408 prediction 0.690046238204849 Functional Loss - ESYT3 ENSG00000158220 CDS Human protein_coding chr3:138187012 chr3:138187013 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_4227 0 0 0 0 2 nucleoplasm 0.438945536932647 0.438723587372292 0 0 hPsi_site_9644 iPseU_CNN:0;iRNA_PseU:0 9645 chr16 14749031 14749031 1 + A G OV 14749030 + 14749010 14749050 41 GCTAGAACGTGTCAAAGCATTAGGCGTGAAGCCCCCCCAGA GCTAGAACGTGTCAAAGCATTGGGCGTGAAGCCCCCCCAGA < 41bp 0.895455791386971 0.550437274475938 0.41333356 0.23378941 prediction 0.690037033822066 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14749030 chr16:14749031 synonymous SNV . 0 22 hPsi_associated_SNPs_4228 0 0 0 0 1 Ribosome 0.438726022939279 0.438885178158886 0 0 hPsi_site_9645 iPseU_CNN:0;iRNA_PseU:0 9646 chr7 299714 299714 1 + A G UCEC 299713 + 299693 299733 41 CCAGGATCCGGAAGTCCACCTACCTGCGTCTGCAGCTCCTG CCAGGATCCGGAAGTCCACCTGCCTGCGTCTGCAGCTCCTG < 41bp 0.844994146034873 0.459474218062669 0.7124673 0.40216738 prediction 0.689988292069746 Functional Loss - FAM20C ENSG00000177706 CDS Human protein_coding chr7:299713 chr7:299714 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4229 0 0 1 0 1 Ribosome 0.438718670203067 0.438718593026796 0.4249346 0 hPsi_site_9646 iPseU_CNN:0.4249346;iRNA_PseU:0 9647 chr17 41584488 41584488 1 + A G COAD 41584487 + 41584467 41584507 41 TCCAGGGGCAAGATTGGGTGTACCCAGCCCAGAAGAGTGGC TCCAGGGGCAAGATTGGGTGTGCCCAGCCCAGAAGAGTGGC < 41bp 0.844989260977439 0.429515615569347 0.40706295 0.15910989 prediction 0.689978521954878 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41584487 chr17:41584488 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4230 0 0 1 0 1 Cytosol 0.438733739186913 0.438724578499401 0 0 hPsi_site_9647 iPseU_CNN:0;iRNA_PseU:0 9648 chr3 46415409 46415409 1 + A G rs1800945 46415408 + 46415388 46415428 41 CCGAGCGAGCAAGCTCAGTTTACACCCGATCCACTGGGGAG CCGAGCGAGCAAGCTCAGTTTGCACCCGATCCACTGGGGAG < 41bp 0.888082204402121 0.543096630018549 0.6604404 0.21152171 prediction 0.689971148767146 Functional Loss - CCR5 ENSG00000160791 CDS Human protein_coding chr3:46415408 chr3:46415409 nonsynonymous SNV 0.321 1 22 hPsi_associated_SNPs_4231 0 0 0 0 0 exosome 0.438718692498073 0.438718592595109 0.3208808 0 hPsi_site_9648 iPseU_CNN:0.3208808;iRNA_PseU:0 9649 chr15 39544423 39544423 1 + A G BLCA 39544422 + 39544402 39544442 41 AATTTGCAGAGCCTTATGGCTAACTCCATGGCCTAGTTTGA AATTTGCAGAGCCTTATGGCTGACTCCATGGCCTAGTTTGA < 41bp 0.874967747279715 0.530006410219277 0.550695 0.27969962 prediction 0.689922674120878 Functional Loss - C15orf54 ENSG00000175746 CDS Human lincRNA chr15:39544422 chr15:39544423 synonymous SNV . 0 22 hPsi_associated_SNPs_4232 0 0 0 0 0 unknown 0.438718581046706 0.43871859333229 0.10139 0 hPsi_site_9649 iPseU_CNN:0.10139;iRNA_PseU:0 9650 chr3 196461908 196461908 1 + A G rs56832090 196461907 + 196461887 196461927 41 CGGGCGCGGTGGCTTACGCCTATAATCCCAGCACTTTGGGA CGGGCGCGGTGGCTTACGCCTGTAATCCCAGCACTTTGGGA < 41bp 0.88069491554155 0.535736185067528 0.58527243 0.4695887 prediction 0.689917460948044 Functional Loss - PIGX ENSG00000163964 UTR3 Human protein_coding chr3:196461907 chr3:196461908 . . 0 22 hPsi_associated_SNPs_4233 0 0 0 0 0 Ribosome 0.438718596352797 0.438718593782855 0.17054486 0 hPsi_site_9650 iPseU_CNN:0.17054486;iRNA_PseU:0 9651 chr11 5410670 5410670 1 + A G COAD 5410669 + 5410649 5410689 41 CAGTCCTCAATTCATGCTGCTATCCAACATTACTCAGTTTA CAGTCCTCAATTCATGCTGCTGTCCAACATTACTCAGTTTA < 41bp 0.858276522214977 0.51332028213683 0.56616426 0.3285058 prediction 0.689912480156295 Functional Loss - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410669 chr11:5410670 synonymous SNV . 0 22 hPsi_associated_SNPs_4234 0 0 0 0 0 nucleoplasm 0.438718277456787 0.438714969121717 0.13232852 0 hPsi_site_9651 iPseU_CNN:0.13232852;iRNA_PseU:0 9652 chr3 141161426 141161426 1 + A G HNSC 141161425 + 141161405 141161445 41 AAAAATATCTTTTGGAGCCATACAATCTGTATTTCCAGCCA AAAAATATCTTTTGGAGCCATGCAATCTGTATTTCCAGCCA < 41bp 0.8691136719293 0.524164517872014 0.18838274 0.16690624 prediction 0.689898308114571 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161425 chr3:141161426 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_4235 0 0 1 0 0 chromatin 0.438352756442239 0.438545305153904 0 0 hPsi_site_9652 iPseU_CNN:0;iRNA_PseU:0 9653 chr8 10285770 10285770 1 + A G LGG 10285769 + 10285749 10285789 41 TGAGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACC TGAGCAAGAACCCCAATGGCTGCTGCGGCCTTGGGGGCACC < 41bp 0.844945165996771 0.469559483936665 0.33306995 0.19775954 prediction 0.689890331993543 Functional Loss - MSRA ENSG00000175806 CDS Human protein_coding chr8:10285769 chr8:10285770 nonsynonymous SNV 0.808 4 22 hPsi_associated_SNPs_4236 0 0 0 0 0 Nucleus 0.438725734231694 0.438858768083278 0 0 hPsi_site_9653 iPseU_CNN:0;iRNA_PseU:0 9654 chr17 56247454 56247454 1 + A G rs9912728 56247453 + 56247433 56247473 41 GCTCTGGGTGGGGCTGGTGGTAGCCACCTGGGTGGGAGGCT GCTCTGGGTGGGGCTGGTGGTGGCCACCTGGGTGGGAGGCT < 41bp 0.889108376652729 0.544205994731514 0.6163461 0.20614743 prediction 0.689804763842431 Functional Loss - OR4D2 ENSG00000255713 CDS Human protein_coding chr17:56247453 chr17:56247454 synonymous SNV . 0 22 hPsi_associated_SNPs_4237 0 0 0 0 0 unknown 0.438718620783616 0.438718592996333 0.2326922 0 hPsi_site_9654 iPseU_CNN:0.2326922;iRNA_PseU:0 9655 chr7 65557878 65557878 1 + A G UCEC 65557877 + 65557857 65557897 41 GATCCGCCAGGTGCGGGCGCTACTGCAGGCACAGCAGGCCT GATCCGCCAGGTGCGGGCGCTGCTGCAGGCACAGCAGGCCT < 41bp 0.881946811642095 0.537048334814783 0.6418504 0.22995833 prediction 0.689796953654623 Functional Loss - ASL ENSG00000126522 CDS Human protein_coding chr7:65557877 chr7:65557878 synonymous SNV . 0 22 hPsi_associated_SNPs_4238 0 0 1 0 0 Ribosome 0.438662017317605 0.438685233213604 0.2837008 0 hPsi_site_9655 iPseU_CNN:0.2837008;iRNA_PseU:0 9656 chrX 78427110 78427110 1 + A G rs146231527 78427109 + 78427089 78427129 41 AACTCCGCTTCTGATTGTCCTATATTGTACCTGGAAGACGG AACTCCGCTTCTGATTGTCCTGTATTGTACCTGGAAGACGG < 41bp 0.875892293812496 0.530998213106227 0.26547062 0.13957968 prediction 0.689788161412539 Functional Loss - GPR174 ENSG00000147138 CDS Human protein_coding chrX:78427109 chrX:78427110 synonymous SNV . 0 22 hPsi_associated_SNPs_4239 0 0 0 0 0 exosome 0.43903078416245 0.438647631306732 0 0 hPsi_site_9656 iPseU_CNN:0;iRNA_PseU:0 9657 chr1 26507320 26507320 1 + A G BLCA 26507319 + 26507299 26507339 41 GGGGACTGTGCCAAGACCCCTATTGATGTCCTCTGTGCAGC GGGGACTGTGCCAAGACCCCTGTTGATGTCCTCTGTGCAGC < 41bp 0.844855670831773 0.450797216838962 0.29845393 0.22420067 prediction 0.689711341663546 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26507319 chr1:26507320 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_4240 0 0 0 0 1 Cytosol 0.438672575838498 0.438837668365726 0 0 hPsi_site_9657 iPseU_CNN:0;iRNA_PseU:0 9658 chr15 78758680 78758680 1 + A G BRCA 78758679 + 78758659 78758699 41 GCAGGAAAGCTCTCTCCAGTTAAAGTGCAGCCTAAGAAGCT GCAGGAAAGCTCTCTCCAGTTGAAGTGCAGCCTAAGAAGCT < 41bp 0.891218229130533 0.546391831947677 0.80811 0.43014163 prediction 0.689652794365713 Functional Loss - IREB2 ENSG00000136381 CDS Human protein_coding chr15:78758679 chr15:78758680 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4241 0 0 0 0 1 Cytosol 0.448448990887753 0.439797305625543 0.61622 0 hPsi_site_9658 iPseU_CNN:0.61622;iRNA_PseU:0 9659 chr1 201965325 201965325 1 + A G LUSC 201965324 + 201965304 201965344 41 TTGATGCTGCCAAGGAGGAGTACAACGGGGTGATAGAAGAA TTGATGCTGCCAAGGAGGAGTGCAACGGGGTGATAGAAGAA < 41bp 0.844797307161854 0.43749043210613 0.33641785 0.2488721 prediction 0.689594614323707 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201965324 chr1:201965325 nonsynonymous SNV 0.910 3 22 hPsi_associated_SNPs_4242 0 0 1 0 2 Ribosome 0.43836303370847 0.438716353556171 0 0 hPsi_site_9659 iPseU_CNN:0;iRNA_PseU:0 9660 chr11 55872908 55872908 1 + A G LUSC 55872907 + 55872887 55872927 41 TGCAGCGATCTGCAGTCCTCTACACTACACAGTTATTATGT TGCAGCGATCTGCAGTCCTCTGCACTACACAGTTATTATGT < 41bp 0.844784893246207 0.472915824875942 0.65734625 0.3203237 prediction 0.689569786492413 Functional Loss - OR8H2 ENSG00000181767 CDS Human protein_coding chr11:55872907 chr11:55872908 synonymous SNV . 0 22 hPsi_associated_SNPs_4243 0 0 0 0 0 unknown 0.438728253778389 0.438727756177002 0.3146925 0 hPsi_site_9660 iPseU_CNN:0.3146925;iRNA_PseU:0 9661 chr19 54621986 54621986 1 + A G LUSC 54621985 + 54621965 54622005 41 ATGATGAAGATTGAGGAGTATATCAGCAAGCAAGCCAAAGC ATGATGAAGATTGAGGAGTATGTCAGCAAGCAAGCCAAAGC < 41bp 0.844738667633491 0.451800807796458 0.5168148 0.3784218 prediction 0.689477335266983 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54621985 chr19:54621986 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4244 0 0 1 0 2 Cytosol 0.438708544316978 0.438718654208813 0.0336296 0 hPsi_site_9661 iPseU_CNN:0.0336296;iRNA_PseU:0 9662 chr5 176084419 176084419 1 + A G rs78621430 176084418 + 176084398 176084438 41 AGCTTCAGAGCACTCTTTTCTATGAGCTGTAACTTTGAGCC AGCTTCAGAGCACTCTTTTCTGTGAGCTGTAACTTTGAGCC < 41bp 0.844737357231077 0.467982717803092 0.29943246 0.25961155 prediction 0.689474714462155 Functional Loss - TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176084418 chr5:176084419 . . 0 22 hPsi_associated_SNPs_4245 0 0 1 2 0 Endoplasmic reticulum 0.438718622365869 0.43871879078531 0 0 hPsi_site_9662 iPseU_CNN:0;iRNA_PseU:0 9663 chr19 19790576 19790576 1 + A G READ 19790575 + 19790555 19790595 41 TACAAATGTAAACAATGTGGTAAAGCCTTCATTTCCGCAGG TACAAATGTAAACAATGTGGTGAAGCCTTCATTTCCGCAGG < 41bp 0.844722534184115 0.45189809608588 0.4675856 0.28008938 prediction 0.689445068368229 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790575 chr19:19790576 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_4246 0 0 0 0 0 nucleolus 0.438717801591253 0.438694632595306 0 0 hPsi_site_9663 iPseU_CNN:0;iRNA_PseU:0 9664 chr20 10015762 10015762 1 + A G rs144604879 10015761 + 10015741 10015781 41 ACCCGGGGCCCATGGACACATACACCCAGCCCTGCTGTCCC ACCCGGGGCCCATGGACACATGCACCCAGCCCTGCTGTCCC < 41bp 0.8447141541157 0.474844515829892 0.40818256 0.21956596 prediction 0.689428308231401 Functional Loss - SNAP25-AS1 ENSG00000227906 ncRNA_intronic Human antisense chr20:10015761 chr20:10015762 . . 0 22 hPsi_associated_SNPs_4247 0 0 0 0 0 unknown 0.438720477092136 0.438724302798536 0 0 hPsi_site_9664 iPseU_CNN:0;iRNA_PseU:0 9665 chr5 161580301 161580301 1 + A G OV 161580300 + 161580280 161580320 41 GCATTGCCAAAATGGACTCCTATGCTCGGATCTTCTTCCCC GCATTGCCAAAATGGACTCCTGTGCTCGGATCTTCTTCCCC < 41bp 0.84468165756197 0.4556972333128 0.38888848 0.24014217 prediction 0.689363315123939 Functional Loss - GABRG2 ENSG00000113327 CDS Human protein_coding chr5:161580300 chr5:161580301 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4248 0 0 0 0 0 exosome 0.438718592877038 0.438718596023128 0 0 hPsi_site_9665 iPseU_CNN:0;iRNA_PseU:0 9666 chr19 54632673 54632673 1 + A G rs35230170 54632672 + 54632652 54632692 41 CCTGCAGAAGCAGAGCGTCGTATATGGCGGGAAGTCCACCA CCTGCAGAAGCAGAGCGTCGTGTATGGCGGGAAGTCCACCA < 41bp 0.889794443711527 0.545130496738507 0.7424176 0.37044734 prediction 0.689327893946039 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54632672 chr19:54632673 nonsynonymous SNV 0.067 0 22 hPsi_associated_SNPs_4249 1 0 1 0 2 Cytosol 0.438715250898662 0.438731767056709 0.4848352 0 hPsi_site_9666 iPseU_CNN:0.4848352;iRNA_PseU:0 9667 chr7 128409225 128409225 1 + A G rs1043550 128409224 + 128409204 128409244 41 CGGCATGATGAGTTCTGAGCTACGGAGGAACCCTCATTTCC CGGCATGATGAGTTCTGAGCTGCGGAGGAACCCTCATTTCC < 41bp 0.844601787758585 0.468725891810267 0.61801773 0.29067147 prediction 0.689203575517171 Functional Loss - CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409224 chr7:128409225 . . 0 22 hPsi_associated_SNPs_4250 0 0 1 0 0 Ribosome 0.43871769675792 0.43871854442548 0.23603546 0 hPsi_site_9667 iPseU_CNN:0.23603546;iRNA_PseU:0 9668 chr9 98229662 98229662 1 + A G UCEC 98229661 + 98229641 98229681 41 CTCTCACTCGGGTGGTGCCATAAAGGCTGACCCCCAGCAAG CTCTCACTCGGGTGGTGCCATGAAGGCTGACCCCCAGCAAG < 41bp 0.887688191291966 0.543086690216253 0.24897072 0.21879756 prediction 0.689203002151426 Functional Loss - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98229661 chr9:98229662 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_4251 0 0 0 0 2 Endoplasmic reticulum 0.438718576505887 0.438710363407504 0 0 hPsi_site_9668 iPseU_CNN:0;iRNA_PseU:0 9669 chr5 95091309 95091309 1 + A G LIHC 95091308 + 95091288 95091328 41 ACTGACATTCAGGATTCCAGTATCATCCGAACTACCCAGGA ACTGACATTCAGGATTCCAGTGTCATCCGAACTACCCAGGA < 41bp 0.844586505859772 0.443160601034688 0.5935773 0.3316989 prediction 0.689173011719544 Functional Loss - RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95091308 chr5:95091309 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_4252 0 0 1 0 0 Cytosol 0.438772867816456 0.438719792007998 0.1871546 0 hPsi_site_9669 iPseU_CNN:0.1871546;iRNA_PseU:0 9670 chr3 25832947 25832947 1 + A G rs150601765 25832946 + 25832926 25832966 41 TCAGAAGCTGATCAAGTGGCTACTGGTGTTGCAATTGGCAT TCAGAAGCTGATCAAGTGGCTGCTGGTGTTGCAATTGGCAT < 41bp 0.844571524088947 0.441385453989709 0.5691811 0.30953962 prediction 0.689143048177893 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25832946 chr3:25832947 nonsynonymous SNV 0.887 1 22 hPsi_associated_SNPs_4253 0 0 0 0 0 Ribosome 0.356640721247986 0.369748938203879 0.1383622 0 hPsi_site_9670 iPseU_CNN:0.1383622;iRNA_PseU:0 9671 chr5 140603528 140603528 1 + A G rs149483573 140603527 + 140603507 140603547 41 GAAGGTACCACTGTTGGAGCTACCTTTCTAATGGAGAGTGC GAAGGTACCACTGTTGGAGCTGCCTTTCTAATGGAGAGTGC < 41bp 0.844534641080338 0.465619125956509 0.19970098 0.14889118 prediction 0.689069282160677 Functional Loss - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140603527 chr5:140603528 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_4254 0 0 0 0 0 exosome 0.438391807823471 0.43699930432946 0 0 hPsi_site_9671 iPseU_CNN:0;iRNA_PseU:0 9672 chr9 37733495 37733495 1 + A G LUAD 37733494 + 37733474 37733514 41 GACTGGGGAATAGAGAACTTTATATCTCCAACTTTACTCCG GACTGGGGAATAGAGAACTTTGTATCTCCAACTTTACTCCG < 41bp 0.889401581891824 0.544905496191912 0.4063934 0.3649752 prediction 0.688992171399825 Functional Loss - FRMPD1 ENSG00000070601 CDS Human protein_coding chr9:37733494 chr9:37733495 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4255 0 0 0 0 1 exosome 0.438705837119297 0.438707902812721 0 0 hPsi_site_9672 iPseU_CNN:0;iRNA_PseU:0 9673 chr22 44546582 44546582 1 + A G rs5764564 44546581 + 44546561 44546601 41 GGGTGCAGGCTTCAAACCTGTAGCTGTCTAGTGACAGAGTG GGGTGCAGGCTTCAAACCTGTGGCTGTCTAGTGACAGAGTG < 41bp 0.84448255037634 0.494495334675424 0.739941 0.20009705 prediction 0.688965100752679 Functional Loss - PARVB ENSG00000188677 intronic Human protein_coding chr22:44546581 chr22:44546582 . . 0 22 hPsi_associated_SNPs_4256 0 0 1 0 0 Ribosome 0.43871890927084 0.438718667553269 0.479882 0 hPsi_site_9673 iPseU_CNN:0.479882;iRNA_PseU:0 9674 chr12 57892256 57892256 1 + A G OV 57892255 + 57892235 57892275 41 ATCTGTGTGGGACAGATGAGTATGGTACAGCAACAGAGACC ATCTGTGTGGGACAGATGAGTGTGGTACAGCAACAGAGACC < 41bp 0.844475579522794 0.448153309664608 0.3338824 0.21338168 prediction 0.688951159045589 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57892255 chr12:57892256 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4257 0 0 1 0 1 Cytosol 0.438720201173284 0.438540669977398 0 0 hPsi_site_9674 iPseU_CNN:0;iRNA_PseU:0 9675 chrX 134714005 134714005 1 + A G UCEC 134714004 + 134713984 134714024 41 GGGAGCTATGCCAAATACATTACAAATCACTCCTGCTATGG GGGAGCTATGCCAAATACATTGCAAATCACTCCTGCTATGG < 41bp 0.844463430600549 0.451945914465187 0.45491466 0.21521538 prediction 0.688926861201098 Functional Loss - INTS6L ENSG00000165359 CDS Human protein_coding chrX:134714004 chrX:134714005 synonymous SNV . 0 22 hPsi_associated_SNPs_4258 0 0 0 0 1 Cytosol 0.438716208601098 0.438717804568547 0 0 hPsi_site_9675 iPseU_CNN:0;iRNA_PseU:0 9676 chr11 33106524 33106524 1 + T C UCEC 33106525 - 33106505 33106545 41 GGTTCTTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTAT GGTTCTTGGAAACAAAGTTGTGTTGTCATTGGTGCCTCTAT < 41bp 0.867686693928665 0.523256277764005 0.67766005 0.35363734 prediction 0.688860832329321 Functional Loss - CSTF3 ENSG00000176148 CDS Human protein_coding chr11:33106525 chr11:33106524 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4259 0 0 1 5 0 Cytosol 0.438831922165732 0.439845352225486 0.3553201 0 hPsi_site_9676 iPseU_CNN:0.3553201;iRNA_PseU:0 9677 chr8 22052262 22052262 1 + A G STAD 22052261 + 22052241 22052281 41 AGCGCCACGACAGCTGTGCCTACGACTATCTGGAGGTGCGC AGCGCCACGACAGCTGTGCCTGCGACTATCTGGAGGTGCGC < 41bp 0.844413243271924 0.454234897551049 0.7173498 0.33642596 prediction 0.688826486543848 Functional Loss - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22052261 chr8:22052262 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_4260 0 0 0 0 1 Endoplasmic reticulum 0.438717316961581 0.43871594339388 0.4346996 0 hPsi_site_9677 iPseU_CNN:0.4346996;iRNA_PseU:0 9678 chr1 91989917 91989917 1 + A G STAD 91989916 + 91989896 91989936 41 TGACCTGCTTGATAAACTTCTAGATCTAAATCCAGCTTCAA TGACCTGCTTGATAAACTTCTGGATCTAAATCCAGCTTCAA < 41bp 0.844405481053967 0.468874903376543 0.2899664 0.2388629 prediction 0.688810962107935 Functional Loss - CDC7 ENSG00000097046 CDS Human protein_coding chr1:91989916 chr1:91989917 synonymous SNV . 0 22 hPsi_associated_SNPs_4261 0 0 1 0 0 Nucleus 0.438758863207866 0.438712711066298 0 0 hPsi_site_9678 iPseU_CNN:0;iRNA_PseU:0 9679 chrX 150349871 150349871 1 + A G rs13440581 150349870 + 150349850 150349890 41 GATTACCATGATGTCGTGGTTATTGATGTTGAAGATGATCC GATTACCATGATGTCGTGGTTGTTGATGTTGAAGATGATCC < 41bp 0.862899204665761 0.518495228492408 0.2868995 0.24681234 prediction 0.688807952346704 Functional Loss - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150349870 chrX:150349871 nonsynonymous SNV 0.221 0 22 hPsi_associated_SNPs_4262 0 0 0 0 0 exosome 0.41107538025018 0.424692400582649 0 0 hPsi_site_9679 iPseU_CNN:0;iRNA_PseU:0 9680 chr17 2268594 2268594 1 + A C rs117713123 2268593 + 2268573 2268613 41 GCACGGGGCGGGCCACCGACTATGTGTTCCGGATCATCTAC GCACGGGGCGGGCCACCGACTCTGTGTTCCGGATCATCTAC < 41bp 0.857270275155093 0.512870107448098 0.76793 0.49448127 prediction 0.68880033541399 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2268593 chr17:2268594 nonsynonymous SNV 0.969 3 22 hPsi_associated_SNPs_4263 0 0 1 0 2 Cytosol 0.429560140396893 0.441895830179512 0.53586 0 hPsi_site_9680 iPseU_CNN:0.53586;iRNA_PseU:0 9681 chr5 102494226 102494226 1 + A G STAD 102494225 + 102494205 102494245 41 CTACAGACATGACCTCAAAATATATGCCTCTGATGAAGGAC CTACAGACATGACCTCAAAATGTATGCCTCTGATGAAGGAC < 41bp 0.872194764125121 0.527853074432904 0.40150177 0.30002722 prediction 0.688683379384435 Functional Loss - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102494225 chr5:102494226 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4264 0 0 1 0 2 Cytosol 0.438705046734922 0.43866363426474 0 0 hPsi_site_9681 iPseU_CNN:0;iRNA_PseU:0 9682 chr8 104432545 104432545 1 + A G rs3134253 104432544 + 104432524 104432564 41 TTTGAGGTCCCACGAGAATATATAAGAGCTTTAAATGCTAC TTTGAGGTCCCACGAGAATATGTAAGAGCTTTAAATGCTAC < 41bp 0.844341554496295 0.460158804160645 0.7937326 0.5994859 prediction 0.68868310899259 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432544 chr8:104432545 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_4265 0 0 1 0 1 Nucleus 0.438718592831086 0.43871857470681 0.3884934 0 hPsi_site_9682 iPseU_CNN:0.3884934;iRNA_PseU:0 Hereditary cancer-predisposing syndrome Hereditary cancer-predisposing syndrome 9683 chr14 105175658 105175658 1 + A G LIHC 105175657 + 105175637 105175677 41 GCTATGATCCGGGCTGGAGATACCACCAAGTTTGATGTGGA GCTATGATCCGGGCTGGAGATGCCACCAAGTTTGATGTGGA < 41bp 0.844300651810321 0.436358822951246 0.6359334 0.36751294 prediction 0.688601303620641 Functional Loss - INF2 ENSG00000203485 CDS Human protein_coding chr14:105175657 chr14:105175658 nonsynonymous SNV 0.695 0 22 hPsi_associated_SNPs_4266 0 0 1 0 2 Cytosol 0.438702426908549 0.439219725575377 0.2718668 0 hPsi_site_9683 iPseU_CNN:0.2718668;iRNA_PseU:0 9684 chr2 169764483 169764483 1 + A G LUSC 169764482 + 169764462 169764502 41 CTCACGAAGAGCATTTATTTTATGTGCTGTCTTTTTGTAAA CTCACGAAGAGCATTTATTTTGTGTGCTGTCTTTTTGTAAA < 41bp 0.881852591995765 0.53755503127308 0.2388202 0.23431388 prediction 0.688595121445369 Functional Loss - G6PC2 ENSG00000152254 CDS Human protein_coding chr2:169764482 chr2:169764483 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_4267 0 0 0 0 0 Nucleus 0.438717782367221 0.438697924142987 0 0 hPsi_site_9684 iPseU_CNN:0;iRNA_PseU:0 9685 chr21 31965087 31965087 1 + A G COAD 31965086 + 31965066 31965106 41 GCTATGGCTCCAGCTTTGGCTACTACTATTGAGGACACCAT GCTATGGCTCCAGCTTTGGCTGCTACTATTGAGGACACCAT < 41bp 0.844282574248535 0.478792590440399 0.22143307 0.1773381 prediction 0.68856514849707 Functional Loss - KRTAP6-3 ENSG00000212938 CDS Human protein_coding chr21:31965086 chr21:31965087 nonsynonymous SNV 0.916 0 22 hPsi_associated_SNPs_4268 0 0 0 0 0 unknown 0.439053087506968 0.438975775923406 0 0 hPsi_site_9685 iPseU_CNN:0;iRNA_PseU:0 9686 chr7 128587981 128587981 1 + A G COAD 128587980 + 128587960 128588000 41 CCAGTGACAAGCAGCGCTTCTACACGAACCAGCTGCTGGAT CCAGTGACAAGCAGCGCTTCTGCACGAACCAGCTGCTGGAT < 41bp 0.844259617376035 0.450449044439284 0.48072737 0.2303451 prediction 0.688519234752069 Functional Loss - IRF5 ENSG00000128604 CDS Human protein_coding chr7:128587980 chr7:128587981 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_4269 0 0 0 0 0 exosome 0.437718346721088 0.438725588553783 0 0 hPsi_site_9686 iPseU_CNN:0;iRNA_PseU:0 9687 chr1 67786088 67786088 1 + A G rs17129772 67786087 + 67786067 67786107 41 AGAGGATGCTCATTGGCATTTATGTTTATAATCACGTGGCT AGAGGATGCTCATTGGCATTTGTGTTTATAATCACGTGGCT < 41bp 0.84424895202738 0.464115901149871 0.16122922 0.124011934 prediction 0.688497904054761 Functional Loss - IL12RB2 ENSG00000081985 CDS Human protein_coding chr1:67786087 chr1:67786088 nonsynonymous SNV 0.437 0 22 hPsi_associated_SNPs_4270 0 0 0 0 3 cytosol 0.438723768390128 0.439207035945418 0 0 hPsi_site_9687 iPseU_CNN:0;iRNA_PseU:0 9688 chr7 65225483 65225483 1 + A G UCEC 65225482 + 65225462 65225502 41 GAATAAATATAAGCTCAGTGTAAAGGGCAAGGCACAGCTTG GAATAAATATAAGCTCAGTGTGAAGGGCAAGGCACAGCTTG < 41bp 0.844109412570977 0.470348444549153 0.66504586 0.2767753 prediction 0.688218825141955 Functional Loss - CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65225482 chr7:65225483 . . 0 22 hPsi_associated_SNPs_4271 0 0 0 0 2 unknown 0.439485279437087 0.438720912845763 0.33009172 0 hPsi_site_9688 iPseU_CNN:0.33009172;iRNA_PseU:0 9689 chr17 9546373 9546373 1 + A G LGG 9546372 + 9546352 9546392 41 ATCTGGTCAAAGTTTGGGATTATAATGAGGGTGAAGTGACT ATCTGGTCAAAGTTTGGGATTGTAATGAGGGTGAAGTGACT < 41bp 0.881666708634159 0.537559158045657 0.33552176 0.26553577 prediction 0.688215101177003 Functional Loss - CFAP52 ENSG00000166596 CDS Human protein_coding chr17:9546372 chr17:9546373 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4272 0 0 0 0 1 nucleus 0.438719875478782 0.438718693469726 0 0 hPsi_site_9689 iPseU_CNN:0;iRNA_PseU:0 9690 chr10 74034654 74034654 1 + A G LUAD 74034653 + 74034633 74034673 41 AAGAACTACTGCGCCTGGCCTACAGCGAGCCGTGCGGCCTG AAGAACTACTGCGCCTGGCCTGCAGCGAGCCGTGCGGCCTG < 41bp 0.844098568768897 0.454025975563164 0.58530235 0.26251054 prediction 0.688197137537794 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034653 chr10:74034654 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_4273 0 0 1 0 0 Ribosome 0.438748712585058 0.438809317740695 0.1706047 0 hPsi_site_9690 iPseU_CNN:0.1706047;iRNA_PseU:0 9691 chr3 9515133 9515133 1 + A C rs13327456 9515132 + 9515112 9515152 41 TTCTCCCCATCTCATTCCTCTATGTCCCATTTGGAGGCGGT TTCTCCCCATCTCATTCCTCTCTGTCCCATTTGGAGGCGGT < 41bp 0.844093494315743 0.490252451188459 0.42789027 0.32980055 prediction 0.688186988631485 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9515132 chr3:9515133 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_4274 0 0 1 0 1 Nucleus 0.438718592995166 0.438718592995102 0 0 hPsi_site_9691 iPseU_CNN:0;iRNA_PseU:0 9692 chr14 78235878 78235878 1 + A G UCEC 78235877 + 78235857 78235897 41 GGAGAACATGATCTTAACCATACTGTCTTCCAAGTGAAAGA GGAGAACATGATCTTAACCATGCTGTCTTCCAAGTGAAAGA < 41bp 0.880521503489662 0.536469579608847 0.312654 0.28580287 prediction 0.688103847761631 Functional Loss - C14orf178 ENSG00000197734 CDS Human protein_coding chr14:78235877 chr14:78235878 nonsynonymous SNV 0.025 0 22 hPsi_associated_SNPs_4275 0 0 0 2 0 Nucleus 0.438717599877201 0.43871858586176 0 0 hPsi_site_9692 iPseU_CNN:0;iRNA_PseU:0 9693 chr9 101829274 101829274 1 + A G THCA 101829273 + 101829253 101829293 41 GTCCACCTACCGAGCATTCTTATCTTCCCATTTGCAAGATC GTCCACCTACCGAGCATTCTTGTCTTCCCATTTGCAAGATC < 41bp 0.887228918629957 0.543184954767125 0.5942157 0.25618178 prediction 0.688087927725665 Functional Loss - COL15A1 ENSG00000204291 CDS Human protein_coding chr9:101829273 chr9:101829274 synonymous SNV . 0 22 hPsi_associated_SNPs_4276 0 0 0 0 1 Endoplasmic reticulum 0.438718591656575 0.438718624697364 0.1884314 0 hPsi_site_9693 iPseU_CNN:0.1884314;iRNA_PseU:0 9694 chr4 88732820 88732820 1 + A G LUAD 88732819 + 88732799 88732839 41 CCAAATGGTGGGTTTGAACCTACAACCCCACCACAAGTCTA CCAAATGGTGGGTTTGAACCTGCAACCCCACCACAAGTCTA < 41bp 0.878770061716067 0.534741125962823 0.62381154 0.35204744 prediction 0.688057871506489 Functional Loss - IBSP ENSG00000029559 CDS Human protein_coding chr4:88732819 chr4:88732820 nonsynonymous SNV 0.112 4 22 hPsi_associated_SNPs_4277 0 0 0 0 0 exosome 0.438718593098487 0.438718592995152 0.24762308 0 hPsi_site_9694 iPseU_CNN:0.24762308;iRNA_PseU:0 9695 chr6 34730433 34730433 1 + A G UCEC 34730432 + 34730412 34730452 41 AAGAGAATGTGAAAGACTATTATCAGAAATGGATGGAAGAG AAGAGAATGTGAAAGACTATTGTCAGAAATGGATGGAAGAG < 41bp 0.843972899625699 0.46013924878561 0.49524644 0.3505515 prediction 0.687945799251399 Functional Loss - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34730432 chr6:34730433 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4278 0 0 1 0 2 Ribosome 0.438709163523389 0.438705751568574 0 0 hPsi_site_9695 iPseU_CNN:0;iRNA_PseU:0 9696 chr1 28149754 28149754 1 + A G rs573558734 28149753 + 28149733 28149773 41 CAAAGGGCTGCCCCCTACCTTATAAGGGTTGCTGGGCATTT CAAAGGGCTGCCCCCTACCTTGTAAGGGTTGCTGGGCATTT < 41bp 0.843966144882958 0.478878807588318 0.27972597 0.22516981 prediction 0.687932289765916 Functional Loss - STX12 ENSG00000117758 UTR3 Human protein_coding chr1:28149753 chr1:28149754 . . 0 22 hPsi_associated_SNPs_4279 0 0 1 1 0 Ribosome 0.438718592995099 0.438718592995096 0 0 hPsi_site_9696 iPseU_CNN:0;iRNA_PseU:0 9697 chr11 4510531 4510531 1 + A G LUSC 4510530 + 4510510 4510550 41 CCATCTGCAAGCCATTGCACTACACGACGGTCCTGACTGGG CCATCTGCAAGCCATTGCACTGCACGACGGTCCTGACTGGG < 41bp 0.843908052730157 0.452606170908984 0.494248 0.21335015 prediction 0.687816105460315 Functional Loss - OR52K1 ENSG00000196778 CDS Human protein_coding chr11:4510530 chr11:4510531 nonsynonymous SNV 0.458 4 22 hPsi_associated_SNPs_4280 0 0 0 0 0 exosome 0.438096184514346 0.438758446976375 0 0 hPsi_site_9697 iPseU_CNN:0;iRNA_PseU:0 9698 chr11 66581371 66581371 1 + A G COAD 66581370 + 66581350 66581390 41 ACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGC ACCTTTGGGTCTGCCTCTGATGTTGTCAACTTGGGAGCAGC < 41bp 0.843896092959146 0.440882772555803 0.27712357 0.26033378 prediction 0.687792185918292 Functional Loss - C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66581370 chr11:66581371 nonsynonymous SNV 0.884 0 22 hPsi_associated_SNPs_4281 0 0 0 0 0 Endoplasmic reticulum 0.438718607590451 0.438718976400696 0 0 hPsi_site_9698 iPseU_CNN:0;iRNA_PseU:0 9699 chr11 111899288 111899288 1 + A G LUSC 111899287 + 111899267 111899307 41 TTGAGAGCCTGGAGGAGTGTTATATGGCAAAGATACTTGTT TTGAGAGCCTGGAGGAGTGTTGTATGGCAAAGATACTTGTT < 41bp 0.890668780991489 0.546785192554116 0.31538904 0.24647424 prediction 0.687767176874747 Functional Loss - DLAT ENSG00000150768 CDS Human protein_coding chr11:111899287 chr11:111899288 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_4282 0 0 1 0 2 Cytosol 0.438726640339251 0.438718605590585 0 0 hPsi_site_9699 iPseU_CNN:0;iRNA_PseU:0 9700 chr8 27297910 27297910 1 + A G COAD 27297909 + 27297889 27297929 41 TCATGACCCGCTGCTGGGACTACGACCCCAGTGACCGGCCC TCATGACCCGCTGCTGGGACTGCGACCCCAGTGACCGGCCC < 41bp 0.843853401471002 0.439836164640392 0.7326839 0.28749496 prediction 0.687706802942004 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27297909 chr8:27297910 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_4283 0 0 0 0 1 chromatin 0.438717493917147 0.438715476540382 0.4653678 0 hPsi_site_9700 iPseU_CNN:0.4653678;iRNA_PseU:0 9701 chr1 211545689 211545689 1 + A G UCEC 211545688 + 211545668 211545708 41 TCTACACCAGCCGCTGTGGCTACCGGCTCTGTGCTAGAGCA TCTACACCAGCCGCTGTGGCTGCCGGCTCTGTGCTAGAGCA < 41bp 0.843851403061824 0.456344669836507 0.46061313 0.33447173 prediction 0.687702806123647 Functional Loss - TRAF5 ENSG00000082512 CDS Human protein_coding chr1:211545688 chr1:211545689 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4284 0 0 1 0 0 Nucleus 0.438718985374394 0.438945412049033 0 0 hPsi_site_9701 iPseU_CNN:0;iRNA_PseU:0 9702 chr2 101087010 101087010 1 + A G HNSC 101087009 + 101086989 101087029 41 CATCTACTGCTTCTGCATGCTACAGATTCCCTCCTCAGGTA CATCTACTGCTTCTGCATGCTGCAGATTCCCTCCTCAGGTA < 41bp 0.843834859903613 0.469667607486556 0.5838059 0.25581643 prediction 0.687669719807226 Functional Loss - NMS ENSG00000204640 CDS Human protein_coding chr2:101087009 chr2:101087010 synonymous SNV . 0 22 hPsi_associated_SNPs_4285 0 0 0 0 1 unknown 0.438884732896826 0.439278785849129 0.1676118 0 hPsi_site_9702 iPseU_CNN:0.1676118;iRNA_PseU:0 9703 chr2 71206385 71206385 1 + A G COAD 71206384 + 71206364 71206404 41 AGACGGCGATCGGGAGCTACTACCAGCTGTTCGCAGCGGCT AGACGGCGATCGGGAGCTACTGCCAGCTGTTCGCAGCGGCT < 41bp 0.843791725691939 0.439497395603178 0.70548207 0.37431276 prediction 0.687583451383879 Functional Loss - ANKRD53 ENSG00000144031 CDS Human protein_coding chr2:71206384 chr2:71206385 nonsynonymous SNV 0.041 2 22 hPsi_associated_SNPs_4286 0 0 0 0 1 exosome 0.438595097935076 0.438703910402106 0.41096414 0 hPsi_site_9703 iPseU_CNN:0.41096414;iRNA_PseU:0 9704 chr19 49983640 49983640 1 + A G COAD 49983639 + 49983619 49983659 41 GCAGCCCCCTCTGCTCCTCCTACTGCTGCTGCCCGTGGGCC GCAGCCCCCTCTGCTCCTCCTGCTGCTGCTGCCCGTGGGCC < 41bp 0.843766266061555 0.439251309109926 0.65117854 0.38934672 prediction 0.687532532123109 Functional Loss - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49983639 chr19:49983640 synonymous SNV . 0 22 hPsi_associated_SNPs_4287 0 0 0 0 2 Endoplasmic reticulum 0.438718583938923 0.438718574545714 0.30235708 0 hPsi_site_9704 iPseU_CNN:0.30235708;iRNA_PseU:0 9705 chr17 48596386 48596386 1 + A G GBM 48596385 + 48596365 48596405 41 TCATGCACACCGGGGAGACCTACAGACGGATCCAGGAGGAG TCATGCACACCGGGGAGACCTGCAGACGGATCCAGGAGGAG < 41bp 0.896967470739446 0.553246671348198 0.36192864 0.24535587 prediction 0.687441598782497 Functional Loss - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48596385 chr17:48596386 nonsynonymous SNV 0.887 4 22 hPsi_associated_SNPs_4288 0 0 0 0 2 exosome 0.439388741727246 0.438721249675148 0 0 hPsi_site_9705 iPseU_CNN:0;iRNA_PseU:0 9706 chr14 88478006 88478006 1 + A G LUAD 88478005 + 88477985 88478025 41 GGAAGCGAACTTACACAATGTATAGAATCACGGTTGCATTA GGAAGCGAACTTACACAATGTGTAGAATCACGGTTGCATTA < 41bp 0.876474869534792 0.532770124730599 0.35492587 0.23211285 prediction 0.687409489608385 Functional Loss - GPR65 ENSG00000140030 CDS Human protein_coding chr14:88478005 chr14:88478006 nonsynonymous SNV 0.764 3 22 hPsi_associated_SNPs_4289 0 0 0 0 0 exosome 0.438780483602334 0.438767539761281 0 0 hPsi_site_9706 iPseU_CNN:0;iRNA_PseU:0 9707 chr11 59245081 59245081 1 + A G LUAD 59245080 + 59245060 59245100 41 CTCGCCTTCACACGCCCATGTATTTTTTGCTCCATAATTTA CTCGCCTTCACACGCCCATGTGTTTTTTGCTCCATAATTTA < 41bp 0.843702196996813 0.465013983467718 0.57526946 0.31097358 prediction 0.687404393993626 Functional Loss - OR4D10 ENSG00000254466 CDS Human protein_coding chr11:59245080 chr11:59245081 nonsynonymous SNV 0.564 3 22 hPsi_associated_SNPs_4290 0 0 0 0 0 unknown 0.438718592995063 0.438718592994951 0.15053892 0 hPsi_site_9707 iPseU_CNN:0.15053892;iRNA_PseU:0 9708 chr12 52390039 52390039 1 + A G rs113737357 52390038 + 52390018 52390058 41 CCCAGGGGAGGTGTATTGTGTATGTAGCCTTAGAGCATCTC CCCAGGGGAGGTGTATTGTGTGTGTAGCCTTAGAGCATCTC < 41bp 0.849644723797033 0.505956492597069 0.5281639 0.37643558 prediction 0.687376462399929 Functional Loss - ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52390038 chr12:52390039 . . 0 22 hPsi_associated_SNPs_4291 0 0 1 2 0 Endoplasmic reticulum 0.438694541520452 0.438613707501162 0.0563278 0 hPsi_site_9708 iPseU_CNN:0.0563278;iRNA_PseU:0 9709 chr1 155582228 155582228 1 + A G rs143029385 155582227 + 155582207 155582247 41 AGGAGGCCCAGAGAAACATCTATCGTCTATTAAACACAGCT AGGAGGCCCAGAGAAACATCTGTCGTCTATTAAACACAGCT < 41bp 0.843679406267812 0.454639601941074 0.6837177 0.3207138 prediction 0.687358812535623 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582227 chr1:155582228 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_4292 0 0 1 0 1 Ribosome 0.438714970404993 0.438716038225273 0.3674354 0 hPsi_site_9709 iPseU_CNN:0.3674354;iRNA_PseU:0 9710 chr7 2404084 2404084 1 + A G KIRC 2404083 + 2404063 2404103 41 TCATCAAAGAGGCATTGCTCTATGGGGGGGAGAGAAATTCA TCATCAAAGAGGCATTGCTCTGTGGGGGGGAGAGAAATTCA < 41bp 0.843643468915363 0.435031199642578 0.6518791 0.34554166 prediction 0.687286937830726 Functional Loss - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2404083 chr7:2404084 synonymous SNV . 0 22 hPsi_associated_SNPs_4293 0 0 1 0 1 Ribosome 0.438718587697987 0.438718502390395 0.3037582 0 hPsi_site_9710 iPseU_CNN:0.3037582;iRNA_PseU:0 9711 chr1 42922700 42922700 1 + A G LUAD 42922699 + 42922679 42922719 41 AGTTCACCACTTTGGCGGACTATTTGCATCTGTTGCAGGCT AGTTCACCACTTTGGCGGACTGTTTGCATCTGTTGCAGGCT < 41bp 0.843607306781753 0.475585832439426 0.3505661 0.32502672 prediction 0.687214613563507 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42922699 chr1:42922700 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4294 0 0 1 0 1 Ribosome 0.438726117028387 0.438719043064973 0 0 hPsi_site_9711 iPseU_CNN:0;iRNA_PseU:0 9712 chr7 19184975 19184975 1 + T C BLCA 19184976 - 19184956 19184996 41 AAGCCGAAGCGATGGCGGCCTATCCGGAGAGCTGCGTGGAC AAGCCGAAGCGATGGCGGCCTGTCCGGAGAGCTGCGTGGAC < 41bp 0.863903664217093 0.520302801365781 0.6461519 0.30376795 prediction 0.687201725702624 Functional Loss - FERD3L ENSG00000146618 CDS Human protein_coding chr7:19184976 chr7:19184975 nonsynonymous SNV 0.956 1 22 hPsi_associated_SNPs_4295 0 0 0 0 0 unknown 0.438718592995104 0.438718592994067 0.2923038 0 hPsi_site_9712 iPseU_CNN:0.2923038;iRNA_PseU:0 9713 chr19 5456749 5456749 1 + A G LUSC 5456748 + 5456728 5456768 41 CCACGTCCCTGGAGGCAGAGTATACCACTGTCTCCTCAGCC CCACGTCCCTGGAGGCAGAGTGTACCACTGTCTCCTCAGCC < 41bp 0.851824983507287 0.508224226412537 0.57182014 0.30145937 prediction 0.687201514189502 Functional Loss - ZNRF4 ENSG00000105428 CDS Human protein_coding chr19:5456748 chr19:5456749 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4296 0 0 0 0 0 unknown 0.438719000011092 0.438718580057222 0.14364028 0 hPsi_site_9713 iPseU_CNN:0.14364028;iRNA_PseU:0 9714 chr19 11144078 11144078 1 + A G HNSC 11144077 + 11144057 11144097 41 AGATCCTAGCTGCAGCCAAGTACAAGCTCAACGTGGACCAG AGATCCTAGCTGCAGCCAAGTGCAAGCTCAACGTGGACCAG < 41bp 0.843595267749937 0.453608538182338 0.6590555 0.45387664 prediction 0.687190535499874 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11144077 chr19:11144078 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4297 0 0 1 0 0 Nucleus 0.438660827421924 0.43874253655681 0.318111 0 hPsi_site_9714 iPseU_CNN:0.318111;iRNA_PseU:0 9715 chr1 146650977 146650977 1 + A G rs587608594 146650976 + 146650956 146650996 41 AAGCTCAGCAAAGACCTGAATATCGTCATAGCCAAGATGGA AAGCTCAGCAAAGACCTGAATGTCGTCATAGCCAAGATGGA < 41bp 0.843539017632229 0.468624773272692 0.637633 0.38817605 prediction 0.687078035264459 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650976 chr1:146650977 . . 0 22 hPsi_associated_SNPs_4298 0 0 1 0 0 unknown 0.438718593097941 0.438718593095785 0.275266 0 hPsi_site_9715 iPseU_CNN:0.275266;iRNA_PseU:0 9716 chr1 115576721 115576721 1 + A G GBM 115576720 + 115576700 115576740 41 ATGTTGCTCCCTATTTTTCCTATCCTGTTGCTTTAAGCTGT ATGTTGCTCCCTATTTTTCCTGTCCTGTTGCTTTAAGCTGT < 41bp 0.843529873396415 0.470758831490424 0.42541158 0.30084872 prediction 0.68705974679283 Functional Loss - TSHB ENSG00000134200 CDS Human protein_coding chr1:115576720 chr1:115576721 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_4299 0 0 0 0 0 exosome 0.43871859271009 0.43871859170859 0 0 hPsi_site_9716 iPseU_CNN:0;iRNA_PseU:0 9717 chr10 116593109 116593109 1 + A G BLCA 116593108 + 116593088 116593128 41 AGACAGGGCCATGTATGGAATATTTGCTTCATCACAAGATC AGACAGGGCCATGTATGGAATGTTTGCTTCATCACAAGATC < 41bp 0.884618146490546 0.541100030237528 0.5965647 0.62591684 prediction 0.687036232506036 Functional Loss - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116593108 chr10:116593109 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4300 0 0 1 0 1 nucleoplasm 0.438718382264536 0.438718506425336 0 0 hPsi_site_9717 iPseU_CNN:0;iRNA_PseU:0 9718 chr7 888226 888226 1 + A G PRAD 888225 + 888205 888245 41 AAGATTGTGAATCCGAAAGCTATAAGTCAAAAAGCCATGAA AAGATTGTGAATCCGAAAGCTGTAAGTCAAAAAGCCATGAA < 41bp 0.85082443550719 0.507309736324747 0.35007232 0.24799249 prediction 0.687029398364886 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:888225 chr7:888226 nonsynonymous SNV 0.102 0 22 hPsi_associated_SNPs_4301 0 0 1 0 1 Endoplasmic reticulum 0.438684620301262 0.438564505219608 0 0 hPsi_site_9718 iPseU_CNN:0;iRNA_PseU:0 9719 chr5 34941237 34941237 1 + A G rs141348854 34941236 + 34941216 34941256 41 AGGCCGAGGACGCTGAGCTCTATGATGACCTTTACTGCCCA AGGCCGAGGACGCTGAGCTCTGTGATGACCTTTACTGCCCA < 41bp 0.883272360639444 0.539785898912458 0.40743607 0.4078673 prediction 0.686972923453972 Functional Loss - DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34941236 chr5:34941237 nonsynonymous SNV 0.932 2 22 hPsi_associated_SNPs_4302 0 0 1 0 2 Cytosol 0.438803623128636 0.438788249499692 0 0 hPsi_site_9719 iPseU_CNN:0;iRNA_PseU:0 9720 chr8 37967961 37967961 1 + A G HNSC 37967960 + 37967940 37967980 41 GTCTGCCATCACAGTGGGAATACCTATTTCCTCCGGAAGCA GTCTGCCATCACAGTGGGAATGCCTATTTCCTCCGGAAGCA < 41bp 0.843478614826781 0.440091982565743 0.36667454 0.16609254 prediction 0.686957229653562 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37967960 chr8:37967961 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_4303 0 0 1 0 2 chromatin 0.438789120544341 0.438885842955663 0 0 hPsi_site_9720 iPseU_CNN:0;iRNA_PseU:0 9721 chr14 67843196 67843196 1 + A G UCEC 67843195 + 67843175 67843215 41 ATGTTGCTGAGGTGTTAGAATACACCAAGGATGAGCAGCTG ATGTTGCTGAGGTGTTAGAATGCACCAAGGATGAGCAGCTG < 41bp 0.843470860818527 0.453215522719942 0.30514908 0.22556975 prediction 0.686941721637054 Functional Loss - EIF2S1 ENSG00000134001 CDS Human protein_coding chr14:67843195 chr14:67843196 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4304 0 0 1 0 1 Cytosol 0.439006702242901 0.439273496047906 0 0 hPsi_site_9721 iPseU_CNN:0;iRNA_PseU:0 9722 chr8 104342067 104342067 1 + A G LGG 104342066 + 104342046 104342086 41 GGCACTTCTGCAGTAGCAATTACTAGCCATGATTACCTAGG GGCACTTCTGCAGTAGCAATTGCTAGCCATGATTACCTAGG < 41bp 0.843412521181222 0.454262556340299 0.4178237 0.2943244 prediction 0.686825042362444 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342066 chr8:104342067 nonsynonymous SNV 0.980 0 22 hPsi_associated_SNPs_4305 0 0 1 0 0 Ribosome 0.438772322303558 0.441523629075465 0 0 hPsi_site_9722 iPseU_CNN:0;iRNA_PseU:0 9723 chr16 15125666 15125666 1 + A G UCEC 15125665 + 15125645 15125685 41 AAACTGCCAGTGCTGTGCTGTACGCTCCAGTTGCGTGAAGA AAACTGCCAGTGCTGTGCTGTGCGCTCCAGTTGCGTGAAGA < 41bp 0.843387985855265 0.43745189116759 0.94301116 0.35174334 prediction 0.68677597171053 Functional Loss - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15125665 chr16:15125666 nonsynonymous SNV 0.941 4 22 hPsi_associated_SNPs_4306 0 0 1 0 2 Cytosol 0.438384524979212 0.438638964769783 0.88602232 0 hPsi_site_9723 iPseU_CNN:0.88602232;iRNA_PseU:0 9724 chrX 12828231 12828231 1 + A G ESCA 12828230 + 12828210 12828250 41 ATTGCCGAGTGGAAGAACTGTATCATTGTTTCACCTGACGC ATTGCCGAGTGGAAGAACTGTGTCATTGTTTCACCTGACGC < 41bp 0.891572385457753 0.548210607405543 0.70741105 0.6301151 prediction 0.686723556104419 Functional Loss - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12828230 chrX:12828231 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_4307 0 0 1 0 2 Ribosome 0.438719160982405 0.438718627354801 0.1545919 0 hPsi_site_9724 iPseU_CNN:0.1545919;iRNA_PseU:0 9725 chr12 125613989 125613989 1 + A G LUAD 125613988 + 125613968 125614008 41 GCAACAAGTACAGGAAGGCGTATTTCTCCAAATTCCCAGGT GCAACAAGTACAGGAAGGCGTGTTTCTCCAAATTCCCAGGT < 41bp 0.843317252750632 0.4427927794731 0.6288827 0.39748216 prediction 0.686634505501264 Functional Loss - AACS ENSG00000081760 CDS Human protein_coding chr12:125613988 chr12:125613989 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_4308 0 0 1 0 1 Ribosome 0.438718592641868 0.43871858578303 0.2577654 0 hPsi_site_9725 iPseU_CNN:0.2577654;iRNA_PseU:0 9726 chr1 111893958 111893958 1 + A G rs1668 111893957 + 111893937 111893977 41 GTATTATAATTGAGCGGCTGTAACTACCTTCACGTGCTCCT GTATTATAATTGAGCGGCTGTGACTACCTTCACGTGCTCCT < 41bp 0.862356409059439 0.519052059427423 0.32080847 0.1898571 prediction 0.686608699264032 Functional Loss - PIFO ENSG00000173947 UTR3 Human protein_coding chr1:111893957 chr1:111893958 . . 0 22 hPsi_associated_SNPs_4309 0 0 0 4 1 exosome 0.438362690412125 0.438638646018152 0 0 hPsi_site_9726 iPseU_CNN:0;iRNA_PseU:0 9727 chr20 43567373 43567373 1 + A G UCEC 43567372 + 43567352 43567392 41 CTATGGAGCAGCCGAAGGCGTACATGCACTGAAACCAGGTG CTATGGAGCAGCCGAAGGCGTGCATGCACTGAAACCAGGTG < 41bp 0.843304262729702 0.448471997613691 0.66390514 0.21377155 prediction 0.686608525459403 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43567372 chr20:43567373 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4310 0 0 1 3 2 chromatin 0.441254638578626 0.438781146167981 0.32781028 0 hPsi_site_9727 iPseU_CNN:0.32781028;iRNA_PseU:0 9728 chr14 73721263 73721263 1 + A G COAD 73721262 + 73721242 73721282 41 GGCGTCCGGAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGG GGCGTCCGGAAGCGGAGCGTTGCTTGCCGGGGTGAAAGGGG < 41bp 0.899322578275986 0.556019252607689 0.97352 0.50541806 prediction 0.686606651336593 Functional Loss - PAPLN ENSG00000100767 CDS Human protein_coding chr14:73721262 chr14:73721263 nonsynonymous SNV 0.030 0 22 hPsi_associated_SNPs_4311 0 0 1 0 0 chromatin 0.439109391207518 0.438809282427887 0.93620388 0 hPsi_site_9728 iPseU_CNN:0.93620388;iRNA_PseU:0 9729 chr7 90894735 90894735 1 + A G rs113491382 90894734 + 90894714 90894754 41 CGCGCCCGTGTGCACCGTGCTAGAGCAGGCGCTGCCGCCCT CGCGCCCGTGTGCACCGTGCTGGAGCAGGCGCTGCCGCCCT < 41bp 0.887013180126905 0.543716955489906 0.6143531 0.2438305 prediction 0.686592449273998 Functional Loss - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90894734 chr7:90894735 synonymous SNV . 0 22 hPsi_associated_SNPs_4312 0 0 1 0 0 Endoplasmic reticulum 0.438542108248549 0.43872263402255 0.2287062 0 hPsi_site_9729 iPseU_CNN:0.2287062;iRNA_PseU:0 9730 chr5 72383519 72383519 1 + A G LGG 72383518 + 72383498 72383538 41 GGGAAGTACCCTTTCAGGAGTAGATTTCGAACTTGTGGGCA GGGAAGTACCCTTTCAGGAGTGGATTTCGAACTTGTGGGCA < 41bp 0.843274071066854 0.451230819390148 0.31727296 0.25829133 prediction 0.686548142133707 Functional Loss - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72383518 chr5:72383519 synonymous SNV . 0 22 hPsi_associated_SNPs_4313 0 0 0 0 1 chromatin 0.438718593038987 0.438718592905358 0 0 hPsi_site_9730 iPseU_CNN:0;iRNA_PseU:0 9731 chr1 167097487 167097487 1 + A G LUAD 167097486 + 167097466 167097506 41 GAGAGGAGAGCCCAGAGCCCTACTTCTTCCGCCGGACCCCA GAGAGGAGAGCCCAGAGCCCTGCTTCTTCCGCCGGACCCCA < 41bp 0.843243757786136 0.44999152329684 0.3787918 0.2998659 prediction 0.686487515572272 Functional Loss - DUSP27 ENSG00000198842 CDS Human protein_coding chr1:167097486 chr1:167097487 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_4314 0 0 0 0 0 Endoplasmic reticulum 0.438718621189734 0.438718268763958 0 0 hPsi_site_9731 iPseU_CNN:0;iRNA_PseU:0 9732 chr15 48427157 48427157 1 + T C SARC 48427158 - 48427138 48427178 41 TAAACTTGGTTGTCATATATTATACCAAGAACTGCTGCTGC TAAACTTGGTTGTCATATATTGTACCAAGAACTGCTGCTGC < 41bp 0.843227603637843 0.470165617871648 0.32910222 0.30088893 prediction 0.686455207275685 Functional Loss - SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48427158 chr15:48427157 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_4315 0 0 1 0 0 exosome 0.4386029847961 0.438588819507893 0 0 hPsi_site_9732 iPseU_CNN:0;iRNA_PseU:0 9733 chr1 226027569 226027569 1 + A G rs35561387 226027568 + 226027548 226027588 41 CTTGAACATGGCTTTGGTTTTAAGCAACTTCTCTACCCTGA CTTGAACATGGCTTTGGTTTTGAGCAACTTCTCTACCCTGA < 41bp 0.843214945901093 0.433279148604704 0.77869713 0.64919543 prediction 0.686429891802185 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027568 chr1:226027569 synonymous SNV . 0 22 hPsi_associated_SNPs_4316 0 0 1 0 1 Endoplasmic reticulum 0.438751351569011 0.438714512867797 0.2590034 0 hPsi_site_9733 iPseU_CNN:0.2590034;iRNA_PseU:0 9734 chr19 10570128 10570128 1 + A G UCEC 10570127 + 10570107 10570147 41 ACATCTTTTGCGTGTCGGATTACGCTGGAGGCCGCTCACTC ACATCTTTTGCGTGTCGGATTGCGCTGGAGGCCGCTCACTC < 41bp 0.843206862485261 0.430863197290835 0.8402815 0.35974315 prediction 0.686413724970522 Functional Loss - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10570127 chr19:10570128 nonsynonymous SNV 0.065 3 22 hPsi_associated_SNPs_4317 0 0 1 0 2 chromatin 0.438468669934727 0.438502550718472 0.680563 0 hPsi_site_9734 iPseU_CNN:0.680563;iRNA_PseU:0 9735 chr13 25670582 25670582 1 + A G LUSC 25670581 + 25670561 25670601 41 TGTTATAAAGGGCAAGCCAGTACGCATCATGTGGTCTCAGC TGTTATAAAGGGCAAGCCAGTGCGCATCATGTGGTCTCAGC < 41bp 0.873628607337523 0.530430010392943 0.8009498 0.283795 prediction 0.68639719388916 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670581 chr13:25670582 synonymous SNV . 0 22 hPsi_associated_SNPs_4318 0 0 0 0 0 Cytosol 0.438712766748927 0.438718756742967 0.6018996 0 hPsi_site_9735 iPseU_CNN:0.6018996;iRNA_PseU:0 9736 chr7 89939514 89939514 1 + A G UCEC 89939513 + 89939493 89939533 41 TTGCAGAGGGTGAAAGCAGTTAAAATTGTGGATGCACCAAA TTGCAGAGGGTGAAAGCAGTTGAAATTGTGGATGCACCAAA < 41bp 0.843174294638614 0.464766193538598 0.70044374 0.3944163 prediction 0.686348589277228 Functional Loss - CFAP69 ENSG00000105792 CDS Human protein_coding chr7:89939513 chr7:89939514 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_4319 0 0 0 0 0 cytosol 0.438707725919617 0.438785678184246 0.40088748 0 hPsi_site_9736 iPseU_CNN:0.40088748;iRNA_PseU:0 9737 chr13 52603546 52603546 1 + A G UCEC 52603545 + 52603525 52603565 41 GCAGCCAGTGACAGATCCTTTACTGACTCCCATGGAAAAGG GCAGCCAGTGACAGATCCTTTGCTGACTCCCATGGAAAAGG < 41bp 0.843160545492525 0.452573398086209 0.4275861 0.25701326 prediction 0.686321090985049 Functional Loss - UTP14C ENSG00000253797 CDS Human protein_coding chr13:52603545 chr13:52603546 synonymous SNV . 0 22 hPsi_associated_SNPs_4320 0 0 1 0 0 nucleoplasm 0.438718835864437 0.438762654715972 0 0 hPsi_site_9737 iPseU_CNN:0;iRNA_PseU:0 9738 chr14 23842425 23842425 1 + A G COAD 23842424 + 23842404 23842444 41 TGGTCATGGGAACCCACACCTACAGCCACTGGCCCAGCTGC TGGTCATGGGAACCCACACCTGCAGCCACTGGCCCAGCTGC < 41bp 0.885023832553753 0.541882018800132 0.61983883 0.34756744 prediction 0.686283627507241 Functional Loss - IL25 ENSG00000166090 CDS Human protein_coding chr14:23842424 chr14:23842425 nonsynonymous SNV 0.035 0 22 hPsi_associated_SNPs_4321 0 0 0 0 1 exosome 0.438731359746464 0.438720364667033 0.23967766 0 hPsi_site_9738 iPseU_CNN:0.23967766;iRNA_PseU:0 9739 chr7 123514872 123514872 1 + A G SKCM 123514871 + 123514851 123514891 41 TTGGGAGCTGCAGGCATTGTTATTTGGGGAGACATGAATTT TTGGGAGCTGCAGGCATTGTTGTTTGGGGAGACATGAATTT < 41bp 0.843117067226348 0.446879995666341 0.4262182 0.3187245 prediction 0.686234134452695 Functional Loss - HYAL4 ENSG00000106302 CDS Human protein_coding chr7:123514871 chr7:123514872 nonsynonymous SNV 0.950 0 22 hPsi_associated_SNPs_4322 0 0 0 0 2 Nucleus 0.438716128545265 0.438717511299556 0 0 hPsi_site_9739 iPseU_CNN:0;iRNA_PseU:0 9740 chr5 140604639 140604639 1 + A G HNSC 140604638 + 140604618 140604658 41 TTGCCCTCAGGTCGCTGGACTACGAGGCCCTACAGGAGTTC TTGCCCTCAGGTCGCTGGACTGCGAGGCCCTACAGGAGTTC < 41bp 0.843107446129903 0.456936252973992 0.52333224 0.35930753 prediction 0.686214892259807 Functional Loss - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140604638 chr5:140604639 nonsynonymous SNV 0.541 3 22 hPsi_associated_SNPs_4323 0 0 1 0 0 exosome 0.438724045597484 0.438718504346175 0.04666448 0 hPsi_site_9740 iPseU_CNN:0.04666448;iRNA_PseU:0 9741 chr7 100954068 100954068 1 + A G rs115899834 100954067 + 100954047 100954087 41 TGAGGTATTTACCAACCAGATACAGAGTTTTCCAGAGCACA TGAGGTATTTACCAACCAGATGCAGAGTTTTCCAGAGCACA < 41bp 0.843103205021977 0.493288567602976 0.5377609 0.26435846 prediction 0.686206410043954 Functional Loss - LOC101927746 ENSG00000232445 ncRNA_exonic Human antisense chr7:100954067 chr7:100954068 . . 0 22 hPsi_associated_SNPs_4324 0 0 0 0 0 unknown 0.438461867281615 0.438755021570047 0.0755218 0 hPsi_site_9741 iPseU_CNN:0.0755218;iRNA_PseU:0 9742 chr9 97844959 97844959 1 + A G rs114825859 97844958 + 97844938 97844978 41 CGGACCAAGGAGCAGATGGATAGGTCCTCAGCCCAGGTGGT CGGACCAAGGAGCAGATGGATGGGTCCTCAGCCCAGGTGGT < 41bp 0.87913576330354 0.536034777621988 0.85810953 0.305225 prediction 0.686201971363105 Functional Loss - C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97844958 chr9:97844959 nonsynonymous SNV 0.362 0 22 hPsi_associated_SNPs_4325 0 0 1 0 1 Cytosol 0.438718603391563 0.438718557676062 0.71621906 0 hPsi_site_9742 iPseU_CNN:0.71621906;iRNA_PseU:0 9743 chr6 53516662 53516662 1 + A G rs550796021 53516661 + 53516641 53516681 41 CCACCTGCAGCGGCGCCGCGTAGCTCCACTGGCCGGTCGCG CCACCTGCAGCGGCGCCGCGTGGCTCCACTGGCCGGTCGCG < 41bp 0.843092085605778 0.496513568799888 0.65352136 0.21848953 prediction 0.686184171211557 Functional Loss - KLHL31 ENSG00000124743 CDS Human protein_coding chr6:53516661 chr6:53516662 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_4326 0 0 0 0 0 exosome 0.43825262839232 0.45070176224405 0.30704272 0 hPsi_site_9743 iPseU_CNN:0.30704272;iRNA_PseU:0 9744 chr1 212798245 212798245 1 + A G GBM 212798244 + 212798224 212798264 41 ATGCTGATTTTCTGCTGCCGTATTATACGGCCCAGAGTGGC ATGCTGATTTTCTGCTGCCGTGTTATACGGCCCAGAGTGGC < 41bp 0.843091411525192 0.466083480465155 0.6526355 0.528561 prediction 0.686182823050383 Functional Loss - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798244 chr1:212798245 nonsynonymous SNV 0.032 2 22 hPsi_associated_SNPs_4327 0 0 0 0 0 exosome 0.438714996700026 0.438710931115488 0.248149 0 hPsi_site_9744 iPseU_CNN:0.248149;iRNA_PseU:0 9745 chr9 133753877 133753877 1 + A G PRAD 133753876 + 133753856 133753896 41 GAATTGACCTGTCCCAGGTGTATGAGCTGCTAGAGAAGGAC GAATTGACCTGTCCCAGGTGTGTGAGCTGCTAGAGAAGGAC < 41bp 0.897263533079977 0.554175708165741 0.33324653 0.24946171 prediction 0.686175649828471 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133753876 chr9:133753877 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_4328 0 0 1 0 2 Endoplasmic reticulum 0.438687070906546 0.43857496840385 0 0 hPsi_site_9745 iPseU_CNN:0;iRNA_PseU:0 9746 chr5 68728790 68728790 1 + A G LUAD 68728789 + 68728769 68728809 41 CAGATGATGAGCGAGAACGCTATAAAGCTGTGTTCCAAGAC CAGATGATGAGCGAGAACGCTGTAAAGCTGTGTTCCAAGAC < 41bp 0.892555196907217 0.549482616214481 0.6926277 0.41382605 prediction 0.686145161385471 Functional Loss - MARVELD2 ENSG00000152939 CDS Human protein_coding chr5:68728789 chr5:68728790 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_4329 0 0 1 0 1 Nucleus 0.432522747396576 0.391263301190345 0.3852554 0 hPsi_site_9746 iPseU_CNN:0.3852554;iRNA_PseU:0 9747 chr3 49450062 49450062 1 + A G UCEC 49450061 + 49450041 49450081 41 GGAATACAGTGACCGGGTTGTATCACCGTCCAGGTGAGGCT GGAATACAGTGACCGGGTTGTGTCACCGTCCAGGTGAGGCT < 41bp 0.87571461558453 0.532691493656335 0.66269904 0.3412159 prediction 0.686046243856389 Functional Loss - TCTA ENSG00000145022 CDS Human protein_coding chr3:49450061 chr3:49450062 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4330 0 0 1 0 1 Ribosome 0.438718562502758 0.438718585986128 0.32539808 0 hPsi_site_9747 iPseU_CNN:0.32539808;iRNA_PseU:0 9748 chr19 13910625 13910625 1 + A G COAD 13910624 + 13910604 13910644 41 GTGAACGGGAAATATGTATGTACTCGTCGCTGGGTTACCCG GTGAACGGGAAATATGTATGTGCTCGTCGCTGGGTTACCCG < 41bp 0.8947287891022 0.551742874625833 0.89919543 0.23827142 prediction 0.685971828952734 Functional Loss - ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13910624 chr19:13910625 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4331 0 0 0 0 1 chromatin 0.438718646065302 0.43871857104165 0.79839086 0 hPsi_site_9748 iPseU_CNN:0.79839086;iRNA_PseU:0 9749 chr7 95115358 95115358 1 + A G GBM 95115357 + 95115337 95115377 41 GAGAAATTTCCTTGAGGCGCTAAAGTCCAATGACTTCGGAA GAGAAATTTCCTTGAGGCGCTGAAGTCCAATGACTTCGGAA < 41bp 0.84297877980127 0.46322089012789 0.5135136 0.290704 prediction 0.685957559602541 Functional Loss - ASB4 ENSG00000005981 CDS Human protein_coding chr7:95115357 chr7:95115358 synonymous SNV . 0 22 hPsi_associated_SNPs_4332 0 0 0 0 0 cytosol 0.438750739849568 0.438752120597509 0.0270272 0 hPsi_site_9749 iPseU_CNN:0.0270272;iRNA_PseU:0 9750 chr21 38884440 38884440 1 + A G rs147650865 38884439 + 38884419 38884459 41 ACCGGACCAGGCCAAGGGTCTACAATTCTCCAACGAATAGC ACCGGACCAGGCCAAGGGTCTGCAATTCTCCAACGAATAGC < 41bp 0.842977935263158 0.460291992949553 0.65508235 0.37054372 prediction 0.685955870526316 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38884439 chr21:38884440 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4333 0 0 1 0 0 Cytosol 0.438718592995124 0.438718592995093 0.3101647 0 hPsi_site_9750 iPseU_CNN:0.3101647;iRNA_PseU:0 9751 chr1 231409763 231409763 1 + A G SKCM 231409762 + 231409742 231409782 41 AGAGAAAGGAAATACTGTGTTAGAATTTTTAGTAGGACTCT AGAGAAAGGAAATACTGTGTTGGAATTTTTAGTAGGACTCT < 41bp 0.842976445995262 0.457843755188296 0.25314945 0.2037406 prediction 0.685952891990523 Functional Loss - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231409762 chr1:231409763 synonymous SNV . 0 22 hPsi_associated_SNPs_4334 0 0 1 0 2 Cytosol 0.438711544561329 0.438712785198739 0 0 hPsi_site_9751 iPseU_CNN:0;iRNA_PseU:0 9752 chr19 3589884 3589884 1 + A G UCEC 3589883 + 3589863 3589903 41 TTGATGACCTGCTGGAAAGCTACATGGGCATTCGGGACCCC TTGATGACCTGCTGGAAAGCTGCATGGGCATTCGGGACCCC < 41bp 0.885471301279652 0.542505241433818 0.8247814 0.38061795 prediction 0.685932119691667 Functional Loss - GIPC3 ENSG00000179855 CDS Human protein_coding chr19:3589883 chr19:3589884 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_4335 0 0 0 0 2 exosome 0.4387232214113 0.438960359489511 0.6495628 0 hPsi_site_9752 iPseU_CNN:0.6495628;iRNA_PseU:0 9753 chr22 50616806 50616806 1 + A G rs5771206 50616805 + 50616785 50616825 41 CCAGGCGGAGGACTGTGGGCTAGGCCTGGCCCCGGCGCCCA CCAGGCGGAGGACTGTGGGCTGGGCCTGGCCCCGGCGCCCA < 41bp 0.84421621089619 0.501250388195737 0.50010264 0.22980183 prediction 0.685931645400906 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50616805 chr22:50616806 synonymous SNV . 0 22 hPsi_associated_SNPs_4336 0 0 1 0 1 Endoplasmic reticulum 0.438718856622513 0.438718592993728 0.000205280000000085 0 hPsi_site_9753 iPseU_CNN:0.000205280000000085;iRNA_PseU:0 9754 chr20 42635350 42635350 1 + A G rs202060984 42635349 + 42635329 42635369 41 GTCTGCTCCCTGCCTACTCCTATCAGGCCATGGACCTCCCA GTCTGCTCCCTGCCTACTCCTGTCAGGCCATGGACCTCCCA < 41bp 0.842935435474319 0.436337909888362 0.48583725 0.27938533 prediction 0.685870870948638 Functional Loss - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42635349 chr20:42635350 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_4337 0 0 0 0 1 exosome 0.43871845015426 0.438718441186029 0 0 hPsi_site_9754 iPseU_CNN:0;iRNA_PseU:0 9755 chr8 95866063 95866063 1 + A G LUSC 95866062 + 95866042 95866082 41 CCTTCTGTCTATAGTGGTGTTATCCTGGGAATTAAAGACAA CCTTCTGTCTATAGTGGTGTTGTCCTGGGAATTAAAGACAA < 41bp 0.84292038643907 0.469262323484219 0.35432512 0.24513415 prediction 0.685840772878141 Functional Loss - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95866062 chr8:95866063 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4338 0 0 1 0 2 Nucleus 0.438718884859044 0.438721282180397 0 0 hPsi_site_9755 iPseU_CNN:0;iRNA_PseU:0 9756 chr17 5324665 5324665 1 + A G READ 5324664 + 5324644 5324684 41 GGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGT GGGACAGGCTCCTAAACAGGTGCCGCCAGGCTGGAAGCAGT < 41bp 0.895188551605521 0.552286636622526 0.37931734 0.1675452 prediction 0.685803829965991 Functional Loss - RPAIN ENSG00000129197 CDS Human protein_coding chr17:5324664 chr17:5324665 nonsynonymous SNV 0.932 3 22 hPsi_associated_SNPs_4339 0 0 1 0 1 Ribosome 0.438718300153163 0.438747340901043 0 0 hPsi_site_9756 iPseU_CNN:0;iRNA_PseU:0 9757 chr8 90937584 90937584 1 + A G STAD 90937583 + 90937563 90937603 41 GGTAATCCTGTGGAAATAGATACATATACCTATGAGTGTAT GGTAATCCTGTGGAAATAGATGCATATACCTATGAGTGTAT < 41bp 0.871964269622641 0.529065569359228 0.61384785 0.30519527 prediction 0.685797400526826 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937583 chr8:90937584 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4340 0 0 1 0 0 Cytosol 0.434026382968774 0.438758215668876 0.2276957 0 hPsi_site_9757 iPseU_CNN:0.2276957;iRNA_PseU:0 9758 chr19 19654818 19654818 1 + A G UCEC 19654817 + 19654797 19654837 41 TGCTGACTCCGGGGAGCCGCTACGCTTCGCCAGGATTCTGC TGCTGACTCCGGGGAGCCGCTGCGCTTCGCCAGGATTCTGC < 41bp 0.842892692403357 0.450424604090309 0.5640212 0.27034348 prediction 0.685785384806714 Functional Loss - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19654817 chr19:19654818 synonymous SNV . 0 22 hPsi_associated_SNPs_4341 0 0 0 0 0 exosome 0.438718584685835 0.438718295338076 0.1280424 0 hPsi_site_9758 iPseU_CNN:0.1280424;iRNA_PseU:0 9759 chr14 75295991 75295991 1 + A G LUAD 75295990 + 75295970 75296010 41 TTGCCAGCAGAATGGAGGATTATCTTCAGCTCCCCGATGAT TTGCCAGCAGAATGGAGGATTGTCTTCAGCTCCCCGATGAT < 41bp 0.888897945018862 0.546030966922471 0.4673421 0.26717985 prediction 0.685733956192783 Functional Loss - YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75295990 chr14:75295991 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4342 0 0 1 0 1 Cytosol 0.438715860352672 0.438716175473267 0 0 hPsi_site_9759 iPseU_CNN:0;iRNA_PseU:0 9760 chr21 31812917 31812917 1 + A G UCEC 31812916 + 31812896 31812936 41 GCAGTCCCCGCCAGACTAACTACATAAGATCCCTTGGATGT GCAGTCCCCGCCAGACTAACTGCATAAGATCCCTTGGATGT < 41bp 0.842863003401985 0.477625458512473 0.6404128 0.34819376 prediction 0.685726006803969 Functional Loss - KRTAP15-1 ENSG00000186970 CDS Human protein_coding chr21:31812916 chr21:31812917 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_4343 0 0 0 0 0 unknown 0.438729823181631 0.438717019909213 0.2808256 0 hPsi_site_9760 iPseU_CNN:0.2808256;iRNA_PseU:0 9761 chr3 184026668 184026668 1 + A G BLCA 184026667 + 184026647 184026687 41 TCCTTCGGAAGAACCCCAATTATGATCTCTAAGTGACCACC TCCTTCGGAAGAACCCCAATTGTGATCTCTAAGTGACCACC < 41bp 0.886972651394961 0.544176322449298 0.4290058 0.31709254 prediction 0.685592657891326 Functional Loss - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184026667 chr3:184026668 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_4344 0 0 1 0 0 Ribosome 0.438892388461857 0.438755355141924 0 0 hPsi_site_9761 iPseU_CNN:0;iRNA_PseU:0 9762 chr11 65650552 65650552 1 + A G COAD 65650551 + 65650531 65650571 41 TGTCCCCAGGAATTGCGCAGTACCTGGCCACTTATGGCCCC TGTCCCCAGGAATTGCGCAGTGCCTGGCCACTTATGGCCCC < 41bp 0.84278115877231 0.443252004130429 0.86025494 0.3734362 prediction 0.685562317544619 Functional Loss - CTSW ENSG00000172543 CDS Human protein_coding chr11:65650551 chr11:65650552 nonsynonymous SNV 0.718 1 22 hPsi_associated_SNPs_4345 0 0 0 0 2 exosome 0.438718840423322 0.438719355054145 0.72050988 0 hPsi_site_9762 iPseU_CNN:0.72050988;iRNA_PseU:0 9763 chr7 99800113 99800113 1 + T C KIRP 99800114 - 99800094 99800134 41 AGGAGGCGGCGCCGCTGGTGTAGCCGCTCTATCTGTAAATG AGGAGGCGGCGCCGCTGGTGTGGCCGCTCTATCTGTAAATG < 41bp 0.893782344891335 0.551010869726835 0.7229184 0.26834375 prediction 0.685542950328999 Functional Loss - STAG3 ENSG00000066923 CDS Human protein_coding chr7:99800114 chr7:99800113 nonsynonymous SNV 0.289 3 22 hPsi_associated_SNPs_4346 0 0 0 0 0 exosome 0.438598920485958 0.438718472926205 0.4458368 0 hPsi_site_9763 iPseU_CNN:0.4458368;iRNA_PseU:0 9764 chr15 91456607 91456607 1 + A G rs148391309 91456606 + 91456586 91456626 41 ACAGACATCGACAGCCAGGGTATCTTCTTCACAGACCTCAA ACAGACATCGACAGCCAGGGTGTCTTCTTCACAGACCTCAA < 41bp 0.884921288887954 0.542171859965877 0.6493228 0.25777847 prediction 0.685498857844153 Functional Loss - MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456606 chr15:91456607 nonsynonymous SNV 0.841 0 22 hPsi_associated_SNPs_4347 0 0 1 0 1 Endoplasmic reticulum 0.438773492710932 0.438717485548776 0.2986456 0 hPsi_site_9764 iPseU_CNN:0.2986456;iRNA_PseU:0 9765 chr10 88718570 88718570 1 + A G UCEC 88718569 + 88718549 88718589 41 AGACCAAGGAGGGGGTCATGTATGTGGGTAAGTGGGGCATG AGACCAAGGAGGGGGTCATGTGTGTGGGTAAGTGGGGCATG < 41bp 0.881236579099721 0.538501424131294 0.45661545 0.25948521 prediction 0.685470309936854 Functional Loss - SNCG ENSG00000173267 CDS Human protein_coding chr10:88718569 chr10:88718570 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4348 0 0 0 0 1 Cytosol 0.437994832496543 0.43870043487496 0 0 hPsi_site_9765 iPseU_CNN:0;iRNA_PseU:0 9766 chr18 59899598 59899598 1 + A G PAAD 59899597 + 59899577 59899617 41 GCAGACAGTGAAAAAAGCGTTATGTTAATGCTGGGACGCTG GCAGACAGTGAAAAAAGCGTTGTGTTAATGCTGGGACGCTG < 41bp 0.894375983546716 0.551641847951916 0.5632176 0.33426553 prediction 0.6854682711896 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59899597 chr18:59899598 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4349 0 0 0 0 2 Cytosol 0.439080115841719 0.440207887537832 0.1264352 0 hPsi_site_9766 iPseU_CNN:0.1264352;iRNA_PseU:0 9767 chr13 98670864 98670864 1 + A G SKCM 98670863 + 98670843 98670883 41 AAGACCAATGCTCCAATATGTATGTGACAACAGCCCAGAAG AAGACCAATGCTCCAATATGTGTGTGACAACAGCCCAGAAG < 41bp 0.892234578215069 0.5495040033299 0.852522 0.44420522 prediction 0.685461149770338 Functional Loss - IPO5 ENSG00000065150 CDS Human protein_coding chr13:98670863 chr13:98670864 synonymous SNV . 0 22 hPsi_associated_SNPs_4350 0 0 1 0 1 Ribosome 0.43871859350755 0.438718592995173 0.705044 0 hPsi_site_9767 iPseU_CNN:0.705044;iRNA_PseU:0 9768 chr11 126201304 126201304 1 + A G LUAD 126201303 + 126201283 126201323 41 GTGCTGTATCATTGCAGATGTAAAGACGACCGTGGTTTACC GTGCTGTATCATTGCAGATGTGAAGACGACCGTGGTTTACC < 41bp 0.84269380378465 0.434774221778241 0.34548092 0.34206423 prediction 0.685387607569301 Functional Loss - DCPS ENSG00000110063 CDS Human protein_coding chr11:126201303 chr11:126201304 synonymous SNV . 0 22 hPsi_associated_SNPs_4351 0 0 0 0 1 Ribosome 0.438651555187403 0.438637401749946 0 0 hPsi_site_9768 iPseU_CNN:0;iRNA_PseU:0 9769 chr1 200012992 200012992 1 + A G UCEC 200012991 + 200012971 200013011 41 ATAAAGTGTCTGGGTACCATTATGGGCTCCTCACCTGTGAA ATAAAGTGTCTGGGTACCATTGTGGGCTCCTCACCTGTGAA < 41bp 0.887675758893269 0.544982059996479 0.31963724 0.40518093 prediction 0.68538739779358 Functional Loss - NR5A2 ENSG00000116833 CDS Human protein_coding chr1:200012991 chr1:200012992 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4352 0 0 0 0 1 cytosol 0.438718687263466 0.438719307981359 0 0 hPsi_site_9769 iPseU_CNN:0;iRNA_PseU:0 9770 chr2 121107209 121107209 1 + A G CESC 121107208 + 121107188 121107228 41 TCATAGCACCCACCGGCTACTACGGGAACTACTGTGAGGGC TCATAGCACCCACCGGCTACTGCGGGAACTACTGTGAGGGC < 41bp 0.842688603448242 0.440417999694893 0.4261967 0.2790593 prediction 0.685377206896483 Functional Loss - INHBB ENSG00000163083 CDS Human protein_coding chr2:121107208 chr2:121107209 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_4353 0 0 0 0 0 Endoplasmic reticulum 0.438718590494025 0.438718576702235 0 0 hPsi_site_9770 iPseU_CNN:0;iRNA_PseU:0 9771 chr2 234737298 234737298 1 + A G rs572080621 234737297 + 234737277 234737317 41 TCATGAGCGGCCCAGTTCTGTACCAGGAGAAGCTGCTGAAG TCATGAGCGGCCCAGTTCTGTGCCAGGAGAAGCTGCTGAAG < 41bp 0.865049077792171 0.522365217857592 0.77802557 0.23142949 prediction 0.685367719869157 Functional Loss - MROH2A ENSG00000185038 CDS Human protein_coding chr2:234737297 chr2:234737298 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_4354 0 0 0 0 0 exosome 0.438718325848511 0.438751656060222 0.55605114 0 hPsi_site_9771 iPseU_CNN:0.55605114;iRNA_PseU:0 9772 chr14 55818275 55818275 1 + A G rs35342573 55818274 + 55818254 55818294 41 CCACATAGACAGTGCAGAGTTAGAGCCGGGTTCGCAAACTG CCACATAGACAGTGCAGAGTTGGAGCCGGGTTCGCAAACTG < 41bp 0.885744579689723 0.543072282543258 0.5839151 0.33215177 prediction 0.685344594292931 Functional Loss - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55818274 chr14:55818275 synonymous SNV . 0 22 hPsi_associated_SNPs_4355 0 0 1 0 0 Nucleus 0.438615784455268 0.438744133530105 0.1678302 0 hPsi_site_9772 iPseU_CNN:0.1678302;iRNA_PseU:0 9773 chr2 27438549 27438549 1 + A G HNSC 27438548 + 27438528 27438568 41 GGAGGAATTAATGCCTGGAATACTATCACCTCTTATATAGA GGAGGAATTAATGCCTGGAATGCTATCACCTCTTATATAGA < 41bp 0.886001509003759 0.543332303745062 0.34094617 0.34831348 prediction 0.685338410517392 Functional Loss - ATRAID ENSG00000138085 CDS Human protein_coding chr2:27438548 chr2:27438549 nonsynonymous SNV 0.808 0 22 hPsi_associated_SNPs_4356 0 0 1 0 2 Endoplasmic reticulum 0.438718593097758 0.438718592920005 0 0 hPsi_site_9773 iPseU_CNN:0;iRNA_PseU:0 9774 chr1 248085085 248085085 1 + A G UCEC 248085084 + 248085064 248085104 41 TTTTATGGAGCTGCCATTTTTACCTATATGAGACCCAAATC TTTTATGGAGCTGCCATTTTTGCCTATATGAGACCCAAATC < 41bp 0.842642151998909 0.475451998426309 0.32577044 0.22107327 prediction 0.685284303997817 Functional Loss - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248085084 chr1:248085085 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_4357 0 0 0 0 0 exosome 0.438719552636996 0.4387197749477 0 0 hPsi_site_9774 iPseU_CNN:0;iRNA_PseU:0 9775 chr15 84868503 84868503 1 + T C rs2563934 84868504 - 84868484 84868524 41 GTCCACGGGCGGGGGCATGGTAACAGTGGTCCTGTTGATGT GTCCACGGGCGGGGGCATGGTGACAGTGGTCCTGTTGATGT < 41bp 0.842639278985856 0.452844779881307 0.57841045 0.1599544 prediction 0.685278557971711 Functional Loss - GOLGA2P7;LOC440300 ENSG00000225151 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:84868504 chr15:84868503 . . 0 22 hPsi_associated_SNPs_4358 0 0 1 0 0 unknown 0.429106632540042 0.43862921479425 0.1568209 0 hPsi_site_9775 iPseU_CNN:0.1568209;iRNA_PseU:0 9776 chr6 74189771 74189771 1 + A G rs144075994 74189770 + 74189750 74189790 41 ATCTACCCACAGGGGTTATCTATGACGCTACCAGCTGAGTT ATCTACCCACAGGGGTTATCTGTGACGCTACCAGCTGAGTT < 41bp 0.84260644479541 0.433806943180494 0.38304195 0.28325027 prediction 0.68521288959082 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74189770 chr6:74189771 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_4359 2 0 1 0 1 Nucleus 0.438567758942289 0.438596958441869 0 0 hPsi_site_9776 iPseU_CNN:0;iRNA_PseU:0 9777 chr19 57642610 57642610 1 + A G rs117302403 57642609 + 57642589 57642629 41 AGAAGCAGGCCTGGTTCACATACAACGATCTATGTGTATCA AGAAGCAGGCCTGGTTCACATGCAACGATCTATGTGTATCA < 41bp 0.869953444805585 0.527348452421604 0.3939736 0.30215374 prediction 0.685209984767962 Functional Loss - USP29 ENSG00000131864 CDS Human protein_coding chr19:57642609 chr19:57642610 nonsynonymous SNV 0.036 3 22 hPsi_associated_SNPs_4360 0 0 0 0 0 unknown 0.438744496713121 0.438709752526858 0 0 hPsi_site_9777 iPseU_CNN:0;iRNA_PseU:0 9778 chr11 4471040 4471040 1 + A G UCEC 4471039 + 4471019 4471059 41 TGTGGCCCGGGCTGTGACACTAATGACTCCACTCCCCTTCC TGTGGCCCGGGCTGTGACACTGATGACTCCACTCCCCTTCC < 41bp 0.878202784361486 0.535601095137844 0.46391755 0.22019142 prediction 0.685203378447284 Functional Loss - OR52K2 ENSG00000181963 CDS Human protein_coding chr11:4471039 chr11:4471040 synonymous SNV . 0 22 hPsi_associated_SNPs_4361 0 0 0 0 0 exosome 0.439183574001428 0.438459118319157 0 0 hPsi_site_9778 iPseU_CNN:0;iRNA_PseU:0 9779 chr8 70513932 70513932 1 + A G COAD 70513931 + 70513911 70513951 41 CGGGGGAGCTGGAGAATACTTACATCATTTACACCGCCGAC CGGGGGAGCTGGAGAATACTTGCATCATTTACACCGCCGAC < 41bp 0.842596864635748 0.440534555013257 0.72050685 0.39351398 prediction 0.685193729271496 Functional Loss - SULF1 ENSG00000137573 CDS Human protein_coding chr8:70513931 chr8:70513932 nonsynonymous SNV 0.984 5 22 hPsi_associated_SNPs_4362 0 0 0 0 1 Nucleus 0.438735033958992 0.43872001382266 0.4410137 0 hPsi_site_9779 iPseU_CNN:0.4410137;iRNA_PseU:0 9780 chr9 136501639 136501639 1 + A G PRAD 136501638 + 136501618 136501658 41 CCCGTGAGAGCCCCCTCCCCTATCACATCCCCCTGGACCCG CCCGTGAGAGCCCCCTCCCCTGTCACATCCCCCTGGACCCG < 41bp 0.889605021802566 0.547009453234833 0.42897782 0.35853037 prediction 0.685191137135464 Functional Loss - DBH ENSG00000123454 CDS Human protein_coding chr9:136501638 chr9:136501639 nonsynonymous SNV 0.027 3 22 hPsi_associated_SNPs_4363 0 0 0 0 0 cytosol 0.43871859299511 0.438718592996014 0 0 hPsi_site_9780 iPseU_CNN:0;iRNA_PseU:0 9781 chr11 73007787 73007787 1 + A G COAD 73007786 + 73007766 73007806 41 TTGCTCTGGCTGACCTGCTATATGCCTGCTCCCTGCCCCTG TTGCTCTGGCTGACCTGCTATGTGCCTGCTCCCTGCCCCTG < 41bp 0.842591519055651 0.434025802468342 0.84949046 0.7456019 prediction 0.685183038111302 Functional Loss - P2RY6 ENSG00000171631 CDS Human protein_coding chr11:73007786 chr11:73007787 nonsynonymous SNV 0.903 4 22 hPsi_associated_SNPs_4364 0 0 0 0 0 exosome 0.438705114740385 0.438688979084468 0.20777712 0 hPsi_site_9781 iPseU_CNN:0.20777712;iRNA_PseU:0 9782 chr11 55944452 55944452 1 + A G UCEC 55944451 + 55944431 55944471 41 TCTTACTGTCAGTGATGGCCTATGACCGCTATGTGGCCATT TCTTACTGTCAGTGATGGCCTGTGACCGCTATGTGGCCATT < 41bp 0.873262710993235 0.530681606840753 0.43843216 0.24285889 prediction 0.685162208304965 Functional Loss - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944451 chr11:55944452 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_4365 0 0 0 0 0 unknown 0.438718639481054 0.438716111745063 0 0 hPsi_site_9782 iPseU_CNN:0;iRNA_PseU:0 9783 chr3 98251959 98251959 1 + A G LUSC 98251958 + 98251938 98251978 41 GGAAGAGGTCTGTGTCACTCTAAAGGGAACTGTGACATTTC GGAAGAGGTCTGTGTCACTCTGAAGGGAACTGTGACATTTC < 41bp 0.842570974224431 0.480365597956637 0.3706418 0.17081055 prediction 0.685141948448863 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251958 chr3:98251959 synonymous SNV . 0 22 hPsi_associated_SNPs_4366 0 0 0 0 0 exosome 0.438718593005864 0.433896590035889 0 0 hPsi_site_9783 iPseU_CNN:0;iRNA_PseU:0 9784 chr1 6505917 6505917 1 + A G CESC 6505916 + 6505896 6505936 41 CCCAGCTCCCAAGCCTCCTGTAGGACCACAGGCAGCTGACA CCCAGCTCCCAAGCCTCCTGTGGGACCACAGGCAGCTGACA < 41bp 0.842562189697388 0.437803001178339 0.45802665 0.274547 prediction 0.685124379394776 Functional Loss - ESPN ENSG00000187017 CDS Human protein_coding chr1:6505916 chr1:6505917 synonymous SNV . 0 22 hPsi_associated_SNPs_4367 0 0 1 0 1 Ribosome 0.438705913486496 0.438718642461834 0 0 hPsi_site_9784 iPseU_CNN:0;iRNA_PseU:0 9785 chr2 102499029 102499029 1 + A G UCEC 102499028 + 102499008 102499048 41 GCTAGGCAAAAAGGATAAGTTACGTGTCTACTATTTGTCCT GCTAGGCAAAAAGGATAAGTTGCGTGTCTACTATTTGTCCT < 41bp 0.855481662918216 0.512924538083754 0.8348954 0.3269059 prediction 0.685114249668925 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102499028 chr2:102499029 synonymous SNV . 0 22 hPsi_associated_SNPs_4368 0 0 1 0 1 Ribosome 0.438606852888864 0.438682867891698 0.6697908 0 hPsi_site_9785 iPseU_CNN:0.6697908;iRNA_PseU:0 9786 chr11 112042610 112042610 1 + A G LUSC 112042609 + 112042589 112042629 41 GAGTTCCTGCGACAGAGGTTTACAGTGATTGCAAACACATT GAGTTCCTGCGACAGAGGTTTGCAGTGATTGCAAACACATT < 41bp 0.864183797805253 0.521628075252146 0.22784916 0.19676891 prediction 0.685111445106213 Functional Loss - TEX12 ENSG00000150783 CDS Human protein_coding chr11:112042609 chr11:112042610 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4369 0 0 0 0 0 exosome 0.438705680959709 0.43868136904352 0 0 hPsi_site_9786 iPseU_CNN:0;iRNA_PseU:0 9787 chr6 170881319 170881319 1 + A G ESCA 170881318 + 170881298 170881338 41 ATGAAGCATTTGAAAACATCTACCCTATTCTAAAGGGATTC ATGAAGCATTTGAAAACATCTGCCCTATTCTAAAGGGATTC < 41bp 0.842540367443262 0.458109950284847 0.22858498 0.14785284 prediction 0.685080734886523 Functional Loss - TBP ENSG00000112592 CDS Human protein_coding chr6:170881318 chr6:170881319 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4370 0 0 1 0 1 Cytosol 0.438718580509098 0.438718586023952 0 0 hPsi_site_9787 iPseU_CNN:0;iRNA_PseU:0 9788 chr15 32935972 32935972 1 + A G UCEC 32935971 + 32935951 32935991 41 TTGCCAGGCCCCGAGTGGAATATCCAGCTCACCAGGCCATG TTGCCAGGCCCCGAGTGGAATGTCCAGCTCACCAGGCCATG < 41bp 0.842533154131654 0.433760293371552 0.5374702 0.30605102 prediction 0.685066308263309 Functional Loss - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32935971 chr15:32935972 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_4371 0 0 0 0 1 cytosol 0.438718577576317 0.438719305818558 0.0749404 0 hPsi_site_9788 iPseU_CNN:0.0749404;iRNA_PseU:0 9789 chr5 133724080 133724080 1 + A G rs142325838 133724079 + 133724059 133724099 41 ATGGAGTCCAACATATGATGTATCTTCTATCTTAACATCAA ATGGAGTCCAACATATGATGTGTCTTCTATCTTAACATCAA < 41bp 0.880196586786874 0.537688277139297 0.26503277 0.22949734 prediction 0.685016619295152 Functional Loss - UBE2B ENSG00000119048 CDS Human protein_coding chr5:133724079 chr5:133724080 synonymous SNV . 0 22 hPsi_associated_SNPs_4372 0 0 1 0 1 Cytosol 0.438722313125627 0.438721160831856 0 0 hPsi_site_9789 iPseU_CNN:0;iRNA_PseU:0 9790 chr7 120381640 120381640 1 + A G LUAD 120381639 + 120381619 120381659 41 AAAGCGGAAGCGCAAATGCTTACATGCAGAGCAAACGGAAT AAAGCGGAAGCGCAAATGCTTGCATGCAGAGCAAACGGAAT < 41bp 0.842480258684135 0.470437497756883 0.9074092 0.4652579 prediction 0.684960517368271 Functional Loss - KCND2 ENSG00000184408 CDS Human protein_coding chr7:120381639 chr7:120381640 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_4373 0 0 0 0 2 exosome 0.438718115106394 0.438705961917405 0.8148184 0 hPsi_site_9790 iPseU_CNN:0.8148184;iRNA_PseU:0 9791 chr6 170159115 170159115 1 + A G UCEC 170159114 + 170159094 170159134 41 CCGTGTGGTCTCAACCTGCGTAACGTCTTATGGCATGGGTT CCGTGTGGTCTCAACCTGCGTGACGTCTTATGGCATGGGTT < 41bp 0.842458998560148 0.460513292658288 0.30273813 0.20568934 prediction 0.684917997120296 Functional Loss - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170159114 chr6:170159115 nonsynonymous SNV 0.137 5 22 hPsi_associated_SNPs_4374 0 0 1 0 2 chromatin 0.438718793697395 0.438718587750893 0 0 hPsi_site_9791 iPseU_CNN:0;iRNA_PseU:0 9792 chr6 146875606 146875606 1 + A G LIHC 146875605 + 146875585 146875625 41 ATTACAGGATAACATAAACATAGAGGAAGCTGCCCGGTTCC ATTACAGGATAACATAAACATGGAGGAAGCTGCCCGGTTCC < 41bp 0.842427673438919 0.460849407589162 0.3769806 0.2660941 prediction 0.684855346877838 Functional Loss - RAB32 ENSG00000118508 CDS Human protein_coding chr6:146875605 chr6:146875606 nonsynonymous SNV 0.930 4 22 hPsi_associated_SNPs_4375 0 0 0 0 1 Ribosome 0.438719123867245 0.438718593000004 0 0 hPsi_site_9792 iPseU_CNN:0;iRNA_PseU:0 9793 chr4 103806392 103806392 1 + A G UCEC 103806391 + 103806371 103806411 41 AGTTTCAGAATGGCTTCGGTTATTGCCTTTCCTTGGTGTAC AGTTTCAGAATGGCTTCGGTTGTTGCCTTTCCTTGGTGTAC < 41bp 0.842387101224245 0.452208118738824 0.626554 0.43336514 prediction 0.68477420244849 Functional Loss - CISD2;SLC9B1 ENSG00000145354;ENSG00000164037 CDS Human other chr4:103806391 chr4:103806392 stoploss 0.597 0 22 hPsi_associated_SNPs_4376 0 0 1 0 1 unknown 0.438421254449614 0.438569632215701 0.253108 0 hPsi_site_9793 iPseU_CNN:0.253108;iRNA_PseU:0 Serum metabolite levels 9794 chr2 47613869 47613869 1 + A G rs551044912 47613868 + 47613848 47613888 41 AGTTTGTTAGTTTAACATCATATATTTGTAATAGTGAAACC AGTTTGTTAGTTTAACATCATGTATTTGTAATAGTGAAACC < 41bp 0.842384674163863 0.492006287017079 0.22270626 0.22356132 prediction 0.684769348327726 Functional Loss - EPCAM ENSG00000119888 UTR3 Human protein_coding chr2:47613868 chr2:47613869 . . 0 22 hPsi_associated_SNPs_4377 0 0 1 0 0 Endoplasmic reticulum 0.438717745925262 0.438713251084852 0 0 hPsi_site_9794 iPseU_CNN:0;iRNA_PseU:0 9795 chr6 24701689 24701689 1 + A G UCEC 24701688 + 24701668 24701708 41 ATATTCATTTTCTTTCAAGGTACATGTCACCTGCAAAATTA ATATTCATTTTCTTTCAAGGTGCATGTCACCTGCAAAATTA < 41bp 0.842380404884323 0.474152063013265 0.35859215 0.15904868 prediction 0.684760809768645 Functional Loss - ACOT13 ENSG00000112304 CDS Human protein_coding chr6:24701688 chr6:24701689 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_4378 0 0 0 0 1 Ribosome 0.438718593012078 0.43871859298115 0 0 hPsi_site_9795 iPseU_CNN:0;iRNA_PseU:0 9796 chr13 25670765 25670765 1 + A G rs113684394 25670764 + 25670744 25670784 41 TTCCAAGGGTTATGGATTTGTACACTTTGAGACACACGAAG TTCCAAGGGTTATGGATTTGTGCACTTTGAGACACACGAAG < 41bp 0.842358156454476 0.463423117573141 0.5963707 0.34658164 prediction 0.684716312908953 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670764 chr13:25670765 synonymous SNV . 0 22 hPsi_associated_SNPs_4379 0 0 0 0 0 Cytosol 0.4386989073034 0.435425795528569 0.1927414 0 hPsi_site_9796 iPseU_CNN:0.1927414;iRNA_PseU:0 9797 chr5 125939809 125939809 1 + A G BLCA 125939808 + 125939788 125939828 41 GGAACAGACCAGAAATGAACTATAAAGGTCGATACGAGATC GGAACAGACCAGAAATGAACTGTAAAGGTCGATACGAGATC < 41bp 0.880849854808571 0.538512358653987 0.8142432 0.5827062 prediction 0.684674992309168 Functional Loss - PHAX ENSG00000164902 CDS Human protein_coding chr5:125939808 chr5:125939809 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_4380 0 0 1 0 1 Ribosome 0.43872148294853 0.438713739875132 0.463074 0 hPsi_site_9797 iPseU_CNN:0.463074;iRNA_PseU:0 9798 chr8 90937536 90937536 1 + A G KIRC 90937535 + 90937515 90937555 41 CAAGGGTGTTACCTAGGCCATAAGTCAAGCCAGCCAATCAC CAAGGGTGTTACCTAGGCCATGAGTCAAGCCAGCCAATCAC < 41bp 0.842310706832851 0.484985142775713 0.27834213 0.22533894 prediction 0.684621413665702 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937535 chr8:90937536 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_4381 0 0 1 0 0 Cytosol 0.438719474009012 0.43779682531323 0 0 hPsi_site_9798 iPseU_CNN:0;iRNA_PseU:0 9799 chr10 101507060 101507060 1 + A C KIRP 101507059 + 101507039 101507079 41 GGCAGCTCTGGAGACCCTCTTAACCTTGGGATTTGAACGCG GGCAGCTCTGGAGACCCTCTTCACCTTGGGATTTGAACGCG < 41bp 0.84229389518273 0.489277543787767 0.59758013 0.34384513 prediction 0.684587790365459 Functional Loss - CUTC ENSG00000119929 CDS Human protein_coding chr10:101507059 chr10:101507060 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4382 0 0 1 0 2 Ribosome 0.438718592994953 0.438718592975572 0.19516026 0 hPsi_site_9799 iPseU_CNN:0.19516026;iRNA_PseU:0 9800 chr8 90802491 90802491 1 + A G rs16900617 90802490 + 90802470 90802510 41 GACCTCAAAAGTCAGACAATTACTAGACACTACTGACATCC GACCTCAAAAGTCAGACAATTGCTAGACACTACTGACATCC < 41bp 0.842288425311177 0.489396567348144 0.35617608 0.16560677 prediction 0.684576850622353 Functional Loss - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90802490 chr8:90802491 synonymous SNV . 0 22 hPsi_associated_SNPs_4383 0 0 1 0 0 chromatin 0.437705169758447 0.438852647211141 0 0 hPsi_site_9800 iPseU_CNN:0;iRNA_PseU:0 9801 chr11 63884566 63884566 1 + A G COAD 63884565 + 63884545 63884585 41 GCGCCCACCTGCAGAAGCTCTACCTGCAGGACAATGCCATC GCGCCCACCTGCAGAAGCTCTGCCTGCAGGACAATGCCATC < 41bp 0.84227197841021 0.433521691963501 0.7252786 0.23044387 prediction 0.684543956820421 Functional Loss - FLRT1 ENSG00000126500 CDS Human protein_coding chr11:63884565 chr11:63884566 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4384 0 0 1 0 0 chromatin 0.438705002759999 0.438718930860449 0.4505572 0 hPsi_site_9801 iPseU_CNN:0.4505572;iRNA_PseU:0 9802 chr8 87568396 87568396 1 + A G BRCA 87568395 + 87568375 87568415 41 CTTGATGAAACCAGACAAGCTATAGTTAATGCCTCCAGGCT CTTGATGAAACCAGACAAGCTGTAGTTAATGCCTCCAGGCT < 41bp 0.842270891860945 0.451126172137811 0.39384648 0.2506444 prediction 0.68454178372189 Functional Loss - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87568395 chr8:87568396 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_4385 0 0 0 0 1 Nucleus 0.438764120893435 0.439133750284996 0 0 hPsi_site_9802 iPseU_CNN:0;iRNA_PseU:0 9803 chr6 50683058 50683058 1 + A G LUAD 50683057 + 50683037 50683077 41 CGGCCGTCACCCCCGACGCCTACTCTCTGAACTCTCTCCAC CGGCCGTCACCCCCGACGCCTGCTCTCTGAACTCTCTCCAC < 41bp 0.842247767814368 0.432951056754047 0.36864972 0.18416113 prediction 0.684495535628736 Functional Loss - TFAP2D ENSG00000008197 CDS Human protein_coding chr6:50683057 chr6:50683058 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4386 0 0 0 2 0 unknown 0.438718618309905 0.438718581610719 0 0 hPsi_site_9803 iPseU_CNN:0;iRNA_PseU:0 9804 chr17 27077331 27077331 1 + A G rs3181215 27077330 + 27077310 27077350 41 AATGCGGGAAGTGTATGGCCTAGATGTTTCATAAGGCTGGA AATGCGGGAAGTGTATGGCCTGGATGTTTCATAAGGCTGGA < 41bp 0.844954499072171 0.502747002667646 0.6692212 0.34629476 prediction 0.684414992809049 Functional Loss - TRAF4 ENSG00000076604 UTR3 Human protein_coding chr17:27077330 chr17:27077331 . . 0 22 hPsi_associated_SNPs_4387 0 0 0 1 0 Ribosome 0.43871846793686 0.438718592980189 0.3384424 0 hPsi_site_9804 iPseU_CNN:0.3384424;iRNA_PseU:0 9805 chr19 14031691 14031691 1 + A G rs529368098 14031690 + 14031670 14031710 41 CAAGCCAAGGGACTGGAGCCTATGCTGGAGGCCTCGCGCAA CAAGCCAAGGGACTGGAGCCTGTGCTGGAGGCCTCGCGCAA < 41bp 0.842160510069532 0.436412277664371 0.29789534 0.22732866 prediction 0.684321020139065 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14031690 chr19:14031691 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4388 1 0 1 0 1 chromatin 0.438718593291118 0.438718594453421 0 0 hPsi_site_9805 iPseU_CNN:0;iRNA_PseU:0 9806 chr2 42557005 42557005 1 + A G COAD 42557004 + 42556984 42557024 41 GTGGAAACTTGTGGAAAAGTTATCTTTGCCTCAGAATGAGA GTGGAAACTTGTGGAAAAGTTGTCTTTGCCTCAGAATGAGA < 41bp 0.876498924190104 0.534339528716893 0.4832425 0.18629065 prediction 0.684318790946423 Functional Loss - EML4 ENSG00000143924 CDS Human protein_coding chr2:42557004 chr2:42557005 synonymous SNV . 0 22 hPsi_associated_SNPs_4389 0 0 1 0 0 Cytosol 0.441467655998904 0.442539574311934 0 0 hPsi_site_9806 iPseU_CNN:0;iRNA_PseU:0 9807 chr5 141359776 141359776 1 + A G UCEC 141359775 + 141359755 141359795 41 ACCTGATGGCAGATGTGGTGTACTGCCCCCGGCCGTGCTGC ACCTGATGGCAGATGTGGTGTGCTGCCCCCGGCCGTGCTGC < 41bp 0.842148967907464 0.43688103512284 0.49895066 0.21383998 prediction 0.684297935814928 Functional Loss - RNF14 ENSG00000013561 CDS Human protein_coding chr5:141359775 chr5:141359776 nonsynonymous SNV 0.969 5 22 hPsi_associated_SNPs_4390 0 0 1 0 1 Ribosome 0.438723888355712 0.43874658712048 0 0 hPsi_site_9807 iPseU_CNN:0;iRNA_PseU:0 9808 chr6 127608655 127608655 1 + A G UCEC 127608654 + 127608634 127608674 41 CAGTAGTGATAGTGAGGATGTATCTGCAGTTGTTGCACAGC CAGTAGTGATAGTGAGGATGTGTCTGCAGTTGTTGCACAGC < 41bp 0.880291908800493 0.538163899186354 0.35897085 0.1954096 prediction 0.684256019228277 Functional Loss - RNF146 ENSG00000118518 CDS Human protein_coding chr6:127608654 chr6:127608655 synonymous SNV . 0 22 hPsi_associated_SNPs_4391 0 0 1 0 0 cytosol 0.435957070525591 0.431117861639716 0 0 hPsi_site_9808 iPseU_CNN:0;iRNA_PseU:0 9809 chrX 64717099 64717099 1 + A G UCEC 64717098 + 64717078 64717118 41 AGGCCATAAAGATATTACTGTATTTGTGCCTGCATGGAGAA AGGCCATAAAGATATTACTGTGTTTGTGCCTGCATGGAGAA < 41bp 0.842109703254878 0.45382505570215 0.63773113 0.3071744 prediction 0.684219406509757 Functional Loss - ZC3H12B ENSG00000102053 CDS Human protein_coding chrX:64717098 chrX:64717099 synonymous SNV . 0 22 hPsi_associated_SNPs_4392 0 0 0 0 2 Endoplasmic reticulum 0.438823510414259 0.437654477526154 0.27546226 0 hPsi_site_9809 iPseU_CNN:0.27546226;iRNA_PseU:0 9810 chr21 35468095 35468095 1 + A G OV 35468094 + 35468074 35468114 41 ATCATTGGGGCACTTACACTTATGATTATTAGCATAATGGA ATCATTGGGGCACTTACACTTGTGATTATTAGCATAATGGA < 41bp 0.842098160353868 0.463147178091969 0.54989165 0.25266933 prediction 0.684196320707736 Functional Loss - SLC5A3 ENSG00000198743;ENSG00000272962 CDS Human other chr21:35468094 chr21:35468095 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_4393 0 0 1 0 0 Nucleus 0.438655321461579 0.438462155184619 0.0997832999999999 0 hPsi_site_9810 iPseU_CNN:0.0997832999999999;iRNA_PseU:0 9811 chr2 102836415 102836415 1 + A G COAD 102836414 + 102836394 102836434 41 TGGAAGTGAAAATGGAAGATTATGGCCTTCCTTTCATGTGC TGGAAGTGAAAATGGAAGATTGTGGCCTTCCTTTCATGTGC < 41bp 0.842089871692879 0.441064713061806 0.5800415 0.62261015 prediction 0.684179743385759 Functional Loss - IL1RL2 ENSG00000115598 CDS Human protein_coding chr2:102836414 chr2:102836415 nonsynonymous SNV 0.974 4 22 hPsi_associated_SNPs_4394 0 0 0 0 2 exosome 0.438717585258172 0.438814370206429 0 0 hPsi_site_9811 iPseU_CNN:0;iRNA_PseU:0 9812 chr3 97887840 97887840 1 + A G LAML 97887839 + 97887819 97887859 41 ATCTCTCTCTGAATGCAAGATACAATTTTTTTCCATTGCAA ATCTCTCTCTGAATGCAAGATGCAATTTTTTTCCATTGCAA < 41bp 0.844704932433903 0.502642225027889 0.22690389 0.17422664 prediction 0.684125414812027 Functional Loss - OR5H15 ENSG00000233412 CDS Human protein_coding chr3:97887839 chr3:97887840 nonsynonymous SNV 0.053 1 22 hPsi_associated_SNPs_4395 0 0 0 0 0 unknown 0.438784811607577 0.438954164042974 0 0 hPsi_site_9812 iPseU_CNN:0;iRNA_PseU:0 9813 chr11 6867744 6867744 1 + A G rs146331147 6867743 + 6867723 6867763 41 GAGCAAGAAGTTGTTATCATTATCCTACACTGTTGTGACTC GAGCAAGAAGTTGTTATCATTGTCCTACACTGTTGTGACTC < 41bp 0.869368289607985 0.52732207341874 0.5131003 0.3830598 prediction 0.68409243237849 Functional Loss - OR10A5 ENSG00000166363 CDS Human protein_coding chr11:6867743 chr11:6867744 synonymous SNV . 0 22 hPsi_associated_SNPs_4396 0 0 0 0 0 unknown 0.438748361350555 0.438735775308051 0.0262005999999999 0 hPsi_site_9813 iPseU_CNN:0.0262005999999999;iRNA_PseU:0 9814 chr5 78919157 78919157 1 + A G rs201783099 78919156 + 78919136 78919176 41 CACCAAGAGCCAACTGTAGTTAACCAGATAGTGCCTTTATC CACCAAGAGCCAACTGTAGTTGACCAGATAGTGCCTTTATC < 41bp 0.842042159611899 0.437646154355559 0.2756934 0.1304025 prediction 0.684084319223798 Functional Loss - PAPD4 ENSG00000164329 CDS Human protein_coding chr5:78919156 chr5:78919157 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4397 0 0 1 0 1 Ribosome 0.438718590080541 0.438718592987155 0 0 hPsi_site_9814 iPseU_CNN:0;iRNA_PseU:0 9815 chr21 33031974 33031974 1 + A G rs7277748 33031973 + 33031953 33031993 41 CGAGGCGCGGAGGTCTGGCCTATAAAGTAGTCGCGGAGACG CGAGGCGCGGAGGTCTGGCCTGTAAAGTAGTCGCGGAGACG < 41bp 0.842040081327529 0.475701525104516 0.25156608 0.13528872 prediction 0.684080162655058 Functional Loss - SOD1 ENSG00000142168 UTR5 Human protein_coding chr21:33031973 chr21:33031974 . . 0 22 hPsi_associated_SNPs_4398 1 0 0 0 0 Ribosome 0.438718593002962 0.438718599087896 0 0 hPsi_site_9815 iPseU_CNN:0;iRNA_PseU:0 9816 chr13 34410327 34410327 1 + A G rs3135633 34410326 + 34410306 34410346 41 AGCTTACTATGAGCATCGTCTACAGCTGGGTAGCAAAGCCA AGCTTACTATGAGCATCGTCTGCAGCTGGGTAGCAAAGCCA < 41bp 0.873208623655073 0.531177430462029 0.3509203 0.31449735 prediction 0.684062386386088 Functional Loss - RFC3 ENSG00000133119 CDS Human protein_coding chr13:34410326 chr13:34410327 synonymous SNV . 0 22 hPsi_associated_SNPs_4399 0 0 1 0 1 Ribosome 0.438718705950091 0.438717346564623 0 0 hPsi_site_9816 iPseU_CNN:0;iRNA_PseU:0 9817 chr1 235505977 235505977 1 + A G UCEC 235505976 + 235505956 235505996 41 GAATACACTCGTAATACCCTTAAAGAGCTTGAAGCTAAAGC GAATACACTCGTAATACCCTTGAAGAGCTTGAAGCTAAAGC < 41bp 0.842019565343314 0.4604276851092 0.35157675 0.272362 prediction 0.684039130686628 Functional Loss - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505976 chr1:235505977 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_4400 0 0 1 0 0 Ribosome 0.438716845918718 0.438740657849098 0 0 hPsi_site_9817 iPseU_CNN:0;iRNA_PseU:0 9818 chr18 11752556 11752556 1 + A G UCEC 11752555 + 11752535 11752575 41 GAGCGCCTGGCTTACAAGGCTACCCACCGCCTGCTGCTCCT GAGCGCCTGGCTTACAAGGCTGCCCACCGCCTGCTGCTCCT < 41bp 0.842018774700805 0.453886840276919 0.39218032 0.2209787 prediction 0.684037549401611 Functional Loss - GNAL ENSG00000141404 CDS Human protein_coding chr18:11752555 chr18:11752556 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_4401 0 0 1 0 1 Cytosol 0.438701385161222 0.438705772881879 0 0 hPsi_site_9818 iPseU_CNN:0;iRNA_PseU:0 9819 chr3 69153920 69153920 1 + A G rs113518171 69153919 + 69153899 69153939 41 TATCTATGGCAGCATGCATGTATAGGCCGAACTATTATCAG TATCTATGGCAGCATGCATGTGTAGGCCGAACTATTATCAG < 41bp 0.841986471338997 0.475811122031103 0.75903326 0.3452583 prediction 0.683972942677995 Functional Loss - ARL6IP5 ENSG00000144746 UTR3 Human protein_coding chr3:69153919 chr3:69153920 . . 0 22 hPsi_associated_SNPs_4402 0 0 1 0 0 Endoplasmic reticulum 0.438720145792526 0.438733295393015 0.51806652 0 hPsi_site_9819 iPseU_CNN:0.51806652;iRNA_PseU:0 9820 chr14 99976809 99976809 1 + A C rs534601080 99976808 + 99976788 99976828 41 TGCCCTACCACCCCCATGTCTACCCGCCCAACCCGCCCCCG TGCCCTACCACCCCCATGTCTCCCCGCCCAACCCGCCCCCG < 41bp 0.841979256191784 0.489589405718495 0.67418206 0.24766779 prediction 0.683958512383568 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99976808 chr14:99976809 nonsynonymous SNV 0.717 1 22 hPsi_associated_SNPs_4403 0 0 1 0 0 chromatin 0.438718593753974 0.438718593072452 0.34836412 0 hPsi_site_9820 iPseU_CNN:0.34836412;iRNA_PseU:0 9821 chr8 65291762 65291762 1 + A G UCEC 65291761 + 65291741 65291781 41 CGGACCTTGATTTAATGTCATACAATTAAGGCACGCGGTGA CGGACCTTGATTTAATGTCATGCAATTAAGGCACGCGGTGA < 41bp 0.841970506312157 0.498894641677231 0.7030416 0.29435608 prediction 0.683941012624314 Functional Loss - MIR124-2 ENSG00000207816 ncRNA_exonic Human miRNA chr8:65291761 chr8:65291762 . . 0 22 hPsi_associated_SNPs_4404 0 0 0 0 0 unknown 0.438778654242714 0.438718450556669 0.4060832 0 hPsi_site_9821 iPseU_CNN:0.4060832;iRNA_PseU:0 9822 chr7 30651821 30651821 1 + A G LUSC 30651820 + 30651800 30651840 41 GCCCAGATTGGAAATTCTTTTAGAAATGAGATCTCCCCTCG GCCCAGATTGGAAATTCTTTTGGAAATGAGATCTCCCCTCG < 41bp 0.895005706902469 0.553060756542001 0.6059952 0.33757734 prediction 0.683889900720935 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30651820 chr7:30651821 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4405 0 0 1 0 1 Cytosol 0.438718592994033 0.438718592994893 0.2119904 0 hPsi_site_9822 iPseU_CNN:0.2119904;iRNA_PseU:0 9823 chr20 36310628 36310628 1 + A G rs6095722 36310627 + 36310607 36310647 41 GCATTTCCTGCCTCGACAGTTATTCTACCCCATCCTCCCCT GCATTTCCTGCCTCGACAGTTGTTCTACCCCATCCTCCCCT < 41bp 0.841939495816439 0.492913068240857 0.6273876 0.3731801 prediction 0.683878991632878 Functional Loss - LOC100287792 ENSG00000204117 ncRNA_exonic Human lincRNA chr20:36310627 chr20:36310628 . . 0 22 hPsi_associated_SNPs_4406 0 0 0 0 0 unknown 0.438718575367271 0.438718592985683 0.2547752 0 hPsi_site_9823 iPseU_CNN:0.2547752;iRNA_PseU:0 9824 chr11 56019988 56019988 1 + A G UCEC 56019987 + 56019967 56020007 41 TTCTTGGATGCTTGCTATTCTACAGTTGTCACTCCAAAAAT TTCTTGGATGCTTGCTATTCTGCAGTTGTCACTCCAAAAAT < 41bp 0.841938872825785 0.492126349098989 0.2931455 0.2468403 prediction 0.68387774565157 Functional Loss - OR5T3 ENSG00000172489 CDS Human protein_coding chr11:56019987 chr11:56019988 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_4407 0 0 0 0 0 unknown 0.438725547797555 0.438718596157038 0 0 hPsi_site_9824 iPseU_CNN:0;iRNA_PseU:0 9825 chr5 140024201 140024201 1 + A G KIRC 140024200 + 140024180 140024220 41 TTGCAGAAAAGGGTCCTGCTTACTGCCAGCGGCTGTGGCCA TTGCAGAAAAGGGTCCTGCTTGCTGCCAGCGGCTGTGGCCA < 41bp 0.896929798427245 0.554996434638494 0.6908823 0.32230055 prediction 0.683866727577501 Functional Loss - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140024200 chr5:140024201 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4408 0 0 0 0 1 chromatin 0.438738099259708 0.438703179759304 0.3817646 0 hPsi_site_9825 iPseU_CNN:0.3817646;iRNA_PseU:0 9826 chr17 61560485 61560485 1 + A G LUAD 61560484 + 61560464 61560504 41 CAGTGGCGCTGGGGGGTCTTTAGTGGGCGTACCCCCCCTTC CAGTGGCGCTGGGGGGTCTTTGGTGGGCGTACCCCCCCTTC < 41bp 0.841931978463186 0.439860684489124 0.957265 0.36767036 prediction 0.683863956926372 Functional Loss - ACE ENSG00000159640 CDS Human protein_coding chr17:61560484 chr17:61560485 nonsynonymous SNV 0.275 2 22 hPsi_associated_SNPs_4409 0 0 0 0 2 cytosol 0.438718592995102 0.438718593345463 0.91453 0 hPsi_site_9826 iPseU_CNN:0.91453;iRNA_PseU:0 9827 chr1 46972693 46972693 1 + A G LUAD 46972692 + 46972672 46972712 41 CGGATGCCGCCATGCAGCACTACGGGGTGAACGGCTACTCA CGGATGCCGCCATGCAGCACTGCGGGGTGAACGGCTACTCA < 41bp 0.841929226088839 0.465507708743445 0.716436 0.29268637 prediction 0.683858452177679 Functional Loss - DMBX1 ENSG00000197587 CDS Human protein_coding chr1:46972692 chr1:46972693 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_4410 0 0 0 0 0 nucleolus 0.438694264884484 0.438718527445926 0.432872 0 hPsi_site_9827 iPseU_CNN:0.432872;iRNA_PseU:0 9828 chr16 71883719 71883719 1 + A G UCEC 71883718 + 71883698 71883738 41 CTCCCCGTGACCAGCGAGGATATGGGGAGAACTACCAGCTG CTCCCCGTGACCAGCGAGGATGTGGGGAGAACTACCAGCTG < 41bp 0.84190597484063 0.452728225378996 0.33208808 0.3229164 prediction 0.68381194968126 Functional Loss - ATXN1L ENSG00000224470 CDS Human protein_coding chr16:71883718 chr16:71883719 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4411 0 0 0 0 0 chromatin 0.439199420524766 0.439011520565482 0 0 hPsi_site_9828 iPseU_CNN:0;iRNA_PseU:0 9829 chr19 35786878 35786878 1 + A G rs113328438 35786877 + 35786857 35786897 41 TCAGAGCACAGCGTCCTGGATATCGTCAGTGAGTCCCCAGC TCAGAGCACAGCGTCCTGGATGTCGTCAGTGAGTCCCCAGC < 41bp 0.841868742300699 0.446215551087164 0.61280066 0.32582676 prediction 0.683737484601397 Functional Loss - MAG ENSG00000105695 CDS Human protein_coding chr19:35786877 chr19:35786878 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_4412 0 0 0 0 1 Endoplasmic reticulum 0.438754649709431 0.439397833172106 0.22560132 0 hPsi_site_9829 iPseU_CNN:0.22560132;iRNA_PseU:0 9830 chr3 45441756 45441756 1 + A G COAD 45441755 + 45441735 45441775 41 AGAAATCGAAGCCAAAATTTTACGTGCTTTCCATGTTCCCT AGAAATCGAAGCCAAAATTTTGCGTGCTTTCCATGTTCCCT < 41bp 0.841866326253689 0.452770751990631 0.75919783 0.21943048 prediction 0.683732652507377 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45441755 chr3:45441756 nonsynonymous SNV 0.953 4 22 hPsi_associated_SNPs_4413 0 0 1 0 1 Endoplasmic reticulum 0.439881722729215 0.438727787082603 0.51839566 0 hPsi_site_9830 iPseU_CNN:0.51839566;iRNA_PseU:0 9831 chr22 41971110 41971110 1 + A G rs60873995 41971109 + 41971089 41971129 41 TGTGCAAGCTGGCCAGGAGGTAGGTGGAGGGCAAGGCCACC TGTGCAAGCTGGCCAGGAGGTGGGTGGAGGGCAAGGCCACC < 41bp 0.841859361008121 0.452750173165786 0.7668005 0.2320244 prediction 0.683718722016241 Functional Loss - CSDC2 ENSG00000172346 UTR3 Human protein_coding chr22:41971109 chr22:41971110 . . 0 22 hPsi_associated_SNPs_4414 0 0 0 0 0 Endoplasmic reticulum 0.4387138355332 0.438718855809476 0.533601 0 hPsi_site_9831 iPseU_CNN:0.533601;iRNA_PseU:0 9832 chr2 118586920 118586920 1 + A G LUSC 118586919 + 118586899 118586939 41 ATAAGTCAGCCCAGGAAGCATATAAGTCATACATACGAGCC ATAAGTCAGCCCAGGAAGCATGTAAGTCATACATACGAGCC < 41bp 0.859626484880067 0.517773432999273 0.28349453 0.24672768 prediction 0.683706103761589 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118586919 chr2:118586920 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_4415 0 0 1 0 1 Nucleus 0.438712108831106 0.438713804615969 0 0 hPsi_site_9832 iPseU_CNN:0;iRNA_PseU:0 9833 chr19 50042431 50042431 1 + A G GBM 50042430 + 50042410 50042450 41 GCTATGTCCAGGTGGAGGAGTACATCGGTGAGTGGGCCCCA GCTATGTCCAGGTGGAGGAGTGCATCGGTGAGTGGGCCCCA < 41bp 0.841851354274529 0.440951046212102 0.44835097 0.40671152 prediction 0.683702708549057 Functional Loss - RCN3 ENSG00000142552 CDS Human protein_coding chr19:50042430 chr19:50042431 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_4416 0 0 1 0 2 membrane 0.438777285437891 0.438716457031128 0 0 hPsi_site_9833 iPseU_CNN:0;iRNA_PseU:0 9834 chr1 27680310 27680310 1 + A G STAD 27680309 + 27680289 27680329 41 CGAATGGGTGGATGGCCTTCTACCCCTCAGAACCAACCTGG CGAATGGGTGGATGGCCTTCTGCCCCTCAGAACCAACCTGG < 41bp 0.841826368201271 0.459311453732502 0.6672027 0.25758904 prediction 0.683652736402543 Functional Loss - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27680309 chr1:27680310 synonymous SNV . 0 22 hPsi_associated_SNPs_4417 0 0 0 0 0 Ribosome 0.438722788622074 0.438718420437752 0.3344054 0 hPsi_site_9834 iPseU_CNN:0.3344054;iRNA_PseU:0 9835 chr9 139973515 139973515 1 + A G rs201253497 139973514 + 139973494 139973534 41 GAGTGGAGTTTGTGCACGTGTACTGTGTGGACAACATCCTG GAGTGGAGTTTGTGCACGTGTGCTGTGTGGACAACATCCTG < 41bp 0.841825104178925 0.431925994323631 0.34053898 0.2186352 prediction 0.68365020835785 Functional Loss - UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139973514 chr9:139973515 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4418 0 0 1 0 2 Ribosome 0.439007208941433 0.430866250559288 0 0 hPsi_site_9835 iPseU_CNN:0;iRNA_PseU:0 9836 chr11 8009216 8009216 1 + A G CESC 8009215 + 8009195 8009235 41 TGGCCTCCATTGTGGACAGCTACGAGAGACGCAACGAGGGT TGGCCTCCATTGTGGACAGCTGCGAGAGACGCAACGAGGGT < 41bp 0.887593568942014 0.545768811736242 0.66338545 0.2399748 prediction 0.683649514411543 Functional Loss - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8009215 chr11:8009216 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4419 0 0 0 0 1 Nucleus 0.440149255563538 0.450700356367614 0.3267709 0 hPsi_site_9836 iPseU_CNN:0.3267709;iRNA_PseU:0 9837 chr1 248525530 248525530 1 + A G LUAD 248525529 + 248525509 248525549 41 CTTCTGTGAAGTTCCTGCTGTATTGAATCTCTCCTGCTCAG CTTCTGTGAAGTTCCTGCTGTGTTGAATCTCTCCTGCTCAG < 41bp 0.875367704144419 0.533555107905387 0.74010146 0.51864153 prediction 0.683625192478065 Functional Loss - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525529 chr1:248525530 synonymous SNV . 0 22 hPsi_associated_SNPs_4420 0 0 0 0 0 unknown 0.437992629361806 0.438803756713202 0.44291986 0 hPsi_site_9837 iPseU_CNN:0.44291986;iRNA_PseU:0 9838 chr4 78870974 78870974 1 + A G LUSC 78870973 + 78870953 78870993 41 GGATATGTCAAGTGACCAGATAGCTGCCAATCTGCAAGCAG GGATATGTCAAGTGACCAGATGGCTGCCAATCTGCAAGCAG < 41bp 0.841725045212602 0.457148644816497 0.27457592 0.12296581 prediction 0.683450090425204 Functional Loss - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78870973 chr4:78870974 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_4421 0 0 0 0 2 Ribosome 0.438746995333839 0.440314535604068 0 0 hPsi_site_9838 iPseU_CNN:0;iRNA_PseU:0 9839 chr1 110129408 110129408 1 + A G STAD 110129407 + 110129387 110129427 41 ATTTGTAATAACAAATGGTTTACAGAAACTTCAATCATTCT ATTTGTAATAACAAATGGTTTGCAGAAACTTCAATCATTCT < 41bp 0.841658450729265 0.484724890113162 0.4262708 0.2758994 prediction 0.683316901458531 Functional Loss - GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110129407 chr1:110129408 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4422 0 0 1 0 2 Cytosol 0.438718593995605 0.438718654230354 0 0 hPsi_site_9839 iPseU_CNN:0;iRNA_PseU:0 9840 chr5 178359422 178359422 1 + A G COAD 178359421 + 178359401 178359441 41 TTCACTGGACGATCATCCCTTACCGTGCATCAGGTCATTCA TTCACTGGACGATCATCCCTTGCCGTGCATCAGGTCATTCA < 41bp 0.890502420724563 0.548865638158639 0.69821167 0.37731713 prediction 0.683273565131847 Functional Loss - ZFP2 ENSG00000198939 CDS Human protein_coding chr5:178359421 chr5:178359422 nonsynonymous SNV 0.702 0 22 hPsi_associated_SNPs_4423 0 0 1 0 0 Nucleus 0.438343915802164 0.437534103116083 0.39642334 0 hPsi_site_9840 iPseU_CNN:0.39642334;iRNA_PseU:0 9841 chr5 141020557 141020557 1 + T C rs116046686 141020558 - 141020538 141020578 41 AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACG AGGGCCTGGGCCTCTTGTGCTGAGAGGGCAGGGGGCCTACG < 41bp 0.865159974534821 0.523537640930609 0.28104275 0.2509156 prediction 0.683244667208424 Functional Loss - FCHSD1;RELL2 ENSG00000164620;ENSG00000197948 UTR3 Human other chr5:141020558 chr5:141020557 . . 0 22 hPsi_associated_SNPs_4424 0 0 0 0 0 unknown 0.438718592998383 0.438717902381146 0 0 hPsi_site_9841 iPseU_CNN:0;iRNA_PseU:0 9842 chr19 18686631 18686631 1 + A G rs41293583 18686630 + 18686610 18686650 41 GCAGTGGCGCAGTCTCGGCTTACTACAACCTCTGCCTCCGG GCAGTGGCGCAGTCTCGGCTTGCTACAACCTCTGCCTCCGG < 41bp 0.841618866608955 0.474657008449281 0.91531897 0.8042657 prediction 0.683237733217911 Functional Loss - UBA52 ENSG00000221983 UTR3 Human protein_coding chr19:18686630 chr19:18686631 . . 0 22 hPsi_associated_SNPs_4425 0 0 1 0 0 Ribosome 0.438718600503712 0.438718485789705 0.22210654 0 hPsi_site_9842 iPseU_CNN:0.22210654;iRNA_PseU:0 9843 chr2 65482767 65482767 1 + A G UCEC 65482766 + 65482746 65482786 41 AAAAACTGTGTTACGTGGGATATAATATTGAGCAAGAGCAG AAAAACTGTGTTACGTGGGATGTAATATTGAGCAAGAGCAG < 41bp 0.879006691115811 0.537391196490203 0.34507835 0.27658296 prediction 0.683230989251217 Functional Loss - ACTR2 ENSG00000138071 CDS Human protein_coding chr2:65482766 chr2:65482767 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_4426 0 0 1 0 2 Ribosome 0.438606904786998 0.43855767934573 0 0 hPsi_site_9843 iPseU_CNN:0;iRNA_PseU:0 9844 chr10 51768755 51768755 1 + A G LUSC 51768754 + 51768734 51768774 41 CATTAAACAGGGCATGCTCTTAAAGCGAAGTGGGAAATGGC CATTAAACAGGGCATGCTCTTGAAGCGAAGTGGGAAATGGC < 41bp 0.84161384528565 0.44447167616909 0.61963445 0.3041395 prediction 0.683227690571301 Functional Loss - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51768754 chr10:51768755 synonymous SNV . 0 22 hPsi_associated_SNPs_4427 0 0 0 0 0 chromatin 0.438796639078746 0.438716491778454 0.2392689 0 hPsi_site_9844 iPseU_CNN:0.2392689;iRNA_PseU:0 9845 chr11 71544285 71544285 1 + A G rs140045460 71544284 + 71544264 71544304 41 CTCTTCGCCATTTTCTTCTTTATGAGCCAAGTTCTACCAGG CTCTTCGCCATTTTCTTCTTTGTGAGCCAAGTTCTACCAGG < 41bp 0.841607947347277 0.469627050055111 0.5896956 0.34650844 prediction 0.683215894694555 Functional Loss - DEFB108B ENSG00000184276 CDS Human protein_coding chr11:71544284 chr11:71544285 nonsynonymous SNV 0.610 1 22 hPsi_associated_SNPs_4428 0 0 0 0 1 unknown 0.438718565588064 0.438718577685698 0.1793912 0 hPsi_site_9845 iPseU_CNN:0.1793912;iRNA_PseU:0 9846 chr4 115589302 115589302 1 + A G rs11098261 115589301 + 115589281 115589321 41 GAACAGTATTTTTGAAACTATATATCATGGTGTGCCTGTAG GAACAGTATTTTTGAAACTATGTATCATGGTGTGCCTGTAG < 41bp 0.841598590218584 0.447607300590837 0.31568658 0.2979811 prediction 0.683197180437168 Functional Loss - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115589301 chr4:115589302 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_4429 0 0 0 0 1 Ribosome 0.438679143290155 0.43869976614227 0 0 hPsi_site_9846 iPseU_CNN:0;iRNA_PseU:0 9847 chr3 186303223 186303223 1 + A G rs188759858 186303222 + 186303202 186303242 41 GAATAAAATTGGACTTTGTTTAAAATAAGTGAATAAGCGAT GAATAAAATTGGACTTTGTTTGAAATAAGTGAATAAGCGAT < 41bp 0.841555342229386 0.488724924404533 0.23585662 0.17776507 prediction 0.683110684458772 Functional Loss - DNAJB11 ENSG00000090520 UTR3 Human protein_coding chr3:186303222 chr3:186303223 . . 0 22 hPsi_associated_SNPs_4430 0 0 1 8 1 Ribosome 0.438718594103914 0.438719256774099 0 0 hPsi_site_9847 iPseU_CNN:0;iRNA_PseU:0 9848 chr20 62701734 62701734 1 + A G UCEC 62701733 + 62701713 62701753 41 GAATGTGCTGTGTGGGGCCATAACACCCCAGCAGATCGCTG GAATGTGCTGTGTGGGGCCATGACACCCCAGCAGATCGCTG < 41bp 0.841546097424951 0.452639395610291 0.29896963 0.21992773 prediction 0.683092194849902 Functional Loss - TCEA2 ENSG00000171703 CDS Human protein_coding chr20:62701733 chr20:62701734 nonsynonymous SNV 0.003 4 22 hPsi_associated_SNPs_4431 0 0 0 0 1 Cytosol 0.438718029848628 0.438720711440121 0 0 hPsi_site_9848 iPseU_CNN:0;iRNA_PseU:0 9849 chr5 140502030 140502030 1 + A G LUAD 140502029 + 140502009 140502049 41 AAATAGCCAGCCGGGTACTCTATTTCCGTTGCTAATAGCTG AAATAGCCAGCCGGGTACTCTGTTTCCGTTGCTAATAGCTG < 41bp 0.841544080588161 0.463079394100414 0.35374466 0.28189394 prediction 0.683088161176323 Functional Loss - PCDHB4 ENSG00000081818 CDS Human protein_coding chr5:140502029 chr5:140502030 synonymous SNV . 0 22 hPsi_associated_SNPs_4432 0 0 0 0 0 exosome 0.438718592948931 0.438718592949412 0 0 hPsi_site_9849 iPseU_CNN:0;iRNA_PseU:0 9850 chr18 47107995 47107995 1 + A G UCEC 47107994 + 47107974 47108014 41 ACAAGAGGAACAGCAAAATGTACCTAAAAACCCGGGCAGGC ACAAGAGGAACAGCAAAATGTGCCTAAAAACCCGGGCAGGC < 41bp 0.841435058500554 0.430335993367883 0.7060524 0.27013722 prediction 0.682870117001108 Functional Loss - LIPG ENSG00000101670 CDS Human protein_coding chr18:47107994 chr18:47107995 nonsynonymous SNV 0.960 5 22 hPsi_associated_SNPs_4433 0 0 0 0 1 Nucleus 0.440380706575266 0.438746753719386 0.4121048 0 hPsi_site_9850 iPseU_CNN:0.4121048;iRNA_PseU:0 9851 chr14 96707630 96707630 1 + A G LIHC 96707629 + 96707609 96707649 41 AGATCGCCTCCTTCATGGCCTACAGCAACAGCTGCCTCAAC AGATCGCCTCCTTCATGGCCTGCAGCAACAGCTGCCTCAAC < 41bp 0.841407829122608 0.476607952104034 0.42823213 0.32552117 prediction 0.682815658245215 Functional Loss - BDKRB2 ENSG00000168398 CDS Human protein_coding chr14:96707629 chr14:96707630 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_4434 0 0 0 0 0 exosome 0.438718618167655 0.438718593922991 0 0 hPsi_site_9851 iPseU_CNN:0;iRNA_PseU:0 9852 chr5 79378239 79378239 1 + T C STAD 79378240 - 79378220 79378260 41 CCACCAACTCAGAGCCTTCATAAAATCGTACCCTGCGGACA CCACCAACTCAGAGCCTTCATGAAATCGTACCCTGCGGACA < 41bp 0.876884044035579 0.535479586082345 0.23072964 0.15617281 prediction 0.682808915906468 Functional Loss - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79378240 chr5:79378239 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4435 0 0 0 0 1 exosome 0.438767738859201 0.438663413306798 0 0 hPsi_site_9852 iPseU_CNN:0;iRNA_PseU:0 9853 chr8 104337039 104337039 1 + A G LUAD 104337038 + 104337018 104337058 41 ATACCCAGAGAGACCAATTATATATTACTCTGTCTGTTACA ATACCCAGAGAGACCAATTATGTATTACTCTGTCTGTTACA < 41bp 0.883284410706438 0.541902136499737 0.28666687 0.2750144 prediction 0.682764548413403 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104337038 chr8:104337039 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_4436 0 0 1 0 0 Ribosome 0.438718578969464 0.43871857093146 0 0 hPsi_site_9853 iPseU_CNN:0;iRNA_PseU:0 9854 chr4 8229571 8229571 1 + A G STAD 8229570 + 8229550 8229590 41 ACCTACTCCTGGCTGACATCTACAGCCGCAAGTGCCTGCCC ACCTACTCCTGGCTGACATCTGCAGCCGCAAGTGCCTGCCC < 41bp 0.897759916986398 0.556389623288619 0.624179 0.3369954 prediction 0.682740587395559 Functional Loss - SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8229570 chr4:8229571 nonsynonymous SNV 0.325 4 22 hPsi_associated_SNPs_4437 0 0 1 0 0 cytosol 0.438718592052952 0.438717634612515 0.248358 0 hPsi_site_9854 iPseU_CNN:0.248358;iRNA_PseU:0 9855 chr12 5020990 5020990 1 + A G UCEC 5020989 + 5020969 5021009 41 GCCCTCTGCCCGAGAAGGAGTACCAGCGCCAGGTGTGGCTG GCCCTCTGCCCGAGAAGGAGTGCCAGCGCCAGGTGTGGCTG < 41bp 0.84134274699401 0.447378210135881 0.40597343 0.26448512 prediction 0.68268549398802 Functional Loss - KCNA1 ENSG00000111262 CDS Human protein_coding chr12:5020989 chr12:5020990 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4438 0 0 0 0 0 unknown 0.438474453633306 0.4385330812714 0 0 hPsi_site_9855 iPseU_CNN:0;iRNA_PseU:0 9856 chr6 35289161 35289161 1 + A G SKCM 35289160 + 35289140 35289180 41 GCTTCCACCCCTCAGGAAGATAAACTGGATCCAGCACCAGA GCTTCCACCCCTCAGGAAGATGAACTGGATCCAGCACCAGA < 41bp 0.841321873205908 0.446224917019635 0.4744069 0.27509958 prediction 0.682643746411816 Functional Loss - DEF6 ENSG00000023892 CDS Human protein_coding chr6:35289160 chr6:35289161 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_4439 0 0 0 0 0 Ribosome 0.438717686306022 0.439310247758436 0 0 hPsi_site_9856 iPseU_CNN:0;iRNA_PseU:0 9857 chr14 99976659 99976659 1 + A G UCEC 99976658 + 99976638 99976678 41 CGCCCCCACCCCCCTCCAGCTACATGACCGGGATGTCCACC CGCCCCCACCCCCCTCCAGCTGCATGACCGGGATGTCCACC < 41bp 0.894419263436435 0.553127668940776 0.4956025 0.23077399 prediction 0.682583188991319 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99976658 chr14:99976659 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4440 0 0 1 0 0 chromatin 0.439131227855396 0.438754410644862 0 0 hPsi_site_9857 iPseU_CNN:0;iRNA_PseU:0 9858 chr11 68703959 68703959 1 + A G rs622082 68703958 + 68703938 68703978 41 ACCAAGCCCCAGGGACCTGCTACGTCCACCAGGACCGGAAG ACCAAGCCCCAGGGACCTGCTGCGTCCACCAGGACCGGAAG < 41bp 0.841289004260715 0.441449144313883 0.25696474 0.18221858 prediction 0.682578008521429 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68703958 chr11:68703959 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4441 2 0 1 0 0 chromatin 0.438348360232771 0.438718641065946 0 0 hPsi_site_9858 iPseU_CNN:0;iRNA_PseU:0 9859 chr6 110146400 110146400 1 + A G LUAD 110146399 + 110146379 110146419 41 CACATCCAGGCCAGCCAAGGTATCATGCAGCCCCTAGGAAA CACATCCAGGCCAGCCAAGGTGTCATGCAGCCCCTAGGAAA < 41bp 0.887118913977212 0.545837905303783 0.7351723 0.3044592 prediction 0.682562017346858 Functional Loss - FIG4 ENSG00000112367 CDS Human protein_coding chr6:110146399 chr6:110146400 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_4442 0 0 0 0 0 Cytosol 0.438718592336602 0.438726895216593 0.4703446 0 hPsi_site_9859 iPseU_CNN:0.4703446;iRNA_PseU:0 9860 chr9 66466636 66466636 1 + A G rs1845075 66466635 + 66466615 66466655 41 AGCATTACATGCCTCTCGGTTACCGGCTAATAAAGGACTCC AGCATTACATGCCTCTCGGTTGCCGGCTAATAAAGGACTCC < 41bp 0.865626321799729 0.524351313870716 0.75280404 0.19591254 prediction 0.682550015858025 Functional Loss - LINC01410 ENSG00000238113 ncRNA_exonic Human lincRNA chr9:66466635 chr9:66466636 . . 0 22 hPsi_associated_SNPs_4443 0 0 1 0 0 unknown 0.438750668909842 0.438688970985768 0.50560808 0 hPsi_site_9860 iPseU_CNN:0.50560808;iRNA_PseU:0 9861 chr2 135012053 135012053 1 + A G PAAD 135012052 + 135012032 135012072 41 ACTTTTGGCTTCATTTGGGGTATGATGCTTCTGCACTTTAC ACTTTTGGCTTCATTTGGGGTGTGATGCTTCTGCACTTTAC < 41bp 0.841248660114965 0.453654098624641 0.3999945 0.26555312 prediction 0.68249732022993 Functional Loss - MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135012052 chr2:135012053 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_4444 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_9861 iPseU_CNN:0;iRNA_PseU:0 9862 chr17 62528989 62528989 1 + A G STAD 62528988 + 62528968 62529008 41 GAACACAGTCTCCTGCCCCTTATGCTGGAGCAGTTTCCGTT GAACACAGTCTCCTGCCCCTTGTGCTGGAGCAGTTTCCGTT < 41bp 0.841237926888688 0.440888349190452 0.3050217 0.20616722 prediction 0.682475853777376 Functional Loss - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62528988 chr17:62528989 nonsynonymous SNV 0.931 2 22 hPsi_associated_SNPs_4445 0 0 1 2 0 Nucleus 0.438714691320942 0.438705058610511 0 0 hPsi_site_9862 iPseU_CNN:0;iRNA_PseU:0 9863 chr1 2428411 2428411 1 + A G LUSC 2428410 + 2428390 2428430 41 ACCGTGTGGACTCCAGCAACTACAACCCGCAGCCCTTCTGG ACCGTGTGGACTCCAGCAACTGCAACCCGCAGCCCTTCTGG < 41bp 0.841236433319175 0.444669533904587 0.5162749 0.32746726 prediction 0.682472866638351 Functional Loss - PLCH2 ENSG00000149527 CDS Human protein_coding chr1:2428410 chr1:2428411 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4446 0 0 0 0 1 nucleus 0.438718558586592 0.438718592533195 0.0325498 0 hPsi_site_9863 iPseU_CNN:0.0325498;iRNA_PseU:0 9864 chr11 125301633 125301633 1 + A G rs185557835 125301632 + 125301612 125301652 41 ACGGAAGGACTTGAGTTGTTTACAAGCCCTGCACTGAGGCA ACGGAAGGACTTGAGTTGTTTGCAAGCCCTGCACTGAGGCA < 41bp 0.841228470326717 0.477242707603999 0.66046876 0.3748963 prediction 0.682456940653433 Functional Loss - PKNOX2 ENSG00000165495 UTR3 Human protein_coding chr11:125301632 chr11:125301633 . . 0 22 hPsi_associated_SNPs_4447 0 0 0 8 0 exosome 0.438718658121183 0.438703803258858 0.32093752 0 hPsi_site_9864 iPseU_CNN:0.32093752;iRNA_PseU:0 9865 chr1 234509285 234509285 1 + A G rs551955550 234509284 + 234509264 234509304 41 TTTTTGCGGCTGGGGAGGTCTACGCTTCTAGAGCTTGAGCC TTTTTGCGGCTGGGGAGGTCTGCGCTTCTAGAGCTTGAGCC < 41bp 0.841224651757686 0.488005250255434 0.44639835 0.2889318 prediction 0.682449303515373 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234509284 chr1:234509285 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4448 0 0 1 0 0 Cytosol 0.438718570938563 0.438718591738331 0 0 hPsi_site_9865 iPseU_CNN:0;iRNA_PseU:0 9866 chr7 134252962 134252962 1 + A G ACC 134252961 + 134252941 134252981 41 AGGTGGCCATTGATGCAGAATATCGCCACATTGACTGTGCC AGGTGGCCATTGATGCAGAATGTCGCCACATTGACTGTGCC < 41bp 0.891702881746761 0.550538986558308 0.51947606 0.31503314 prediction 0.682327790376906 Functional Loss - AKR1B15 ENSG00000227471 CDS Human protein_coding chr7:134252961 chr7:134252962 nonsynonymous SNV 0.790 3 22 hPsi_associated_SNPs_4449 0 0 0 0 1 exosome 0.43878138748374 0.438731432187353 0.03895212 0 hPsi_site_9866 iPseU_CNN:0.03895212;iRNA_PseU:0 9867 chr14 102843168 102843168 1 + A G OV 102843167 + 102843147 102843187 41 GTTTCCGCTCTATCGTGGTCTATCTCACGGCCCTCGACACC GTTTCCGCTCTATCGTGGTCTGTCTCACGGCCCTCGACACC < 41bp 0.841163182516217 0.425617931378525 0.6151824 0.41146085 prediction 0.682326365032434 Functional Loss - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102843167 chr14:102843168 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_4450 0 0 1 0 1 Cytosol 0.436940270479552 0.437780692828174 0.2303648 0 hPsi_site_9867 iPseU_CNN:0.2303648;iRNA_PseU:0 9868 chr11 561891 561891 1 + A G STAD 561890 + 561870 561910 41 CATCGCACTAGCCCAAGCAATAGGTGAGTCCTCTCGGGGTC CATCGCACTAGCCCAAGCAATGGGTGAGTCCTCTCGGGGTC < 41bp 0.841161081006772 0.445296636387896 0.3564474 0.26177204 prediction 0.682322162013544 Functional Loss - RASSF7 ENSG00000099849 CDS Human protein_coding chr11:561890 chr11:561891 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_4451 0 0 1 0 1 exosome 0.438627707880813 0.438718592995165 0 0 hPsi_site_9868 iPseU_CNN:0;iRNA_PseU:0 9869 chr7 116436072 116436072 1 + A G SKCM 116436071 + 116436051 116436091 41 ATGTCCATGTGAACGCTACTTATGTGAACGTAAAATGTGTC ATGTCCATGTGAACGCTACTTGTGTGAACGTAAAATGTGTC < 41bp 0.853623693753309 0.512471488985022 0.64862627 0.4120653 prediction 0.682304409536574 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116436071 chr7:116436072 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4452 0 0 1 0 0 Cytosol 0.438710446037167 0.438702186482439 0.29725254 0 hPsi_site_9869 iPseU_CNN:0.29725254;iRNA_PseU:0 9870 chr4 123301355 123301355 1 + A G STAD 123301354 + 123301334 123301374 41 CAGGATGGTCCTCAGAAAGTTACGGCCTGTCCAAGATGGCA CAGGATGGTCCTCAGAAAGTTGCGGCCTGTCCAAGATGGCA < 41bp 0.89477875598513 0.553628657136002 0.7971596 0.23251718 prediction 0.682300197698256 Functional Loss - ADAD1 ENSG00000164113 CDS Human protein_coding chr4:123301354 chr4:123301355 nonsynonymous SNV 0.409 0 22 hPsi_associated_SNPs_4453 0 0 0 0 1 exosome 0.438710769356351 0.438727202192053 0.5943192 0 hPsi_site_9870 iPseU_CNN:0.5943192;iRNA_PseU:0 9871 chr11 5655984 5655984 1 + A G STAD 5655983 + 5655963 5656003 41 GAAGAAAAGAAGACGCTGGATAAGTTTGCAGAGGCTGAGGA GAAGAAAAGAAGACGCTGGATGAGTTTGCAGAGGCTGAGGA < 41bp 0.841148205044457 0.443921294002636 0.63845533 0.31348723 prediction 0.682296410088914 Functional Loss - TRIM34;TRIM6-TRIM34 ENSG00000258588;ENSG00000258659 CDS Human other chr11:5655983 chr11:5655984 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_4454 0 0 0 0 0 unknown 0.442617871786106 0.438717193188784 0.27691066 0 hPsi_site_9871 iPseU_CNN:0.27691066;iRNA_PseU:0 9872 chr12 121416581 121416581 1 + A G MESO 121416580 + 121416560 121416600 41 GGCAGCCGAGCCATGGTTTCTAAACTGAGCCAGCTGCAGAC GGCAGCCGAGCCATGGTTTCTGAACTGAGCCAGCTGCAGAC < 41bp 0.841141225193736 0.467729591481602 0.72270083 0.57403785 prediction 0.682282450387473 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121416580 chr12:121416581 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_4455 0 0 1 0 0 cytosol 0.438718636245255 0.438719988398298 0.29732596 0 hPsi_site_9872 iPseU_CNN:0.29732596;iRNA_PseU:0 9873 chr2 33012122 33012122 1 + A G HNSC 33012121 + 33012101 33012141 41 ACTGGCAGATTTGGGAAAACTACATCCTCACCAGCACTGAC ACTGGCAGATTTGGGAAAACTGCATCCTCACCAGCACTGAC < 41bp 0.841137572087127 0.45233073846236 0.3136018 0.28316396 prediction 0.682275144174254 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33012121 chr2:33012122 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4456 0 0 1 1 1 Nucleus 0.438436378363844 0.438659523581095 0 0 hPsi_site_9873 iPseU_CNN:0;iRNA_PseU:0 9874 chr22 32215113 32215113 1 + A G LIHC 32215112 + 32215092 32215132 41 TGCATGTTCGACCTGGTGGATACACGCCCCAGAGAGCACTG TGCATGTTCGACCTGGTGGATGCACGCCCCAGAGAGCACTG < 41bp 0.8411353368212 0.455315769051005 0.903131 0.39359528 prediction 0.6822706736424 Functional Loss - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32215112 chr22:32215113 nonsynonymous SNV 0.985 2 22 hPsi_associated_SNPs_4457 0 0 1 2 1 chromatin 0.445588904636245 0.438227791473249 0.806262 0 hPsi_site_9874 iPseU_CNN:0.806262;iRNA_PseU:0 9875 chr16 57691322 57691322 1 + A G UCEC 57691321 + 57691301 57691341 41 TGGACGCCGTGCACAAGCACTACCTGAGCCTCCTCTCCTAC TGGACGCCGTGCACAAGCACTGCCTGAGCCTCCTCTCCTAC < 41bp 0.841134801357556 0.44032094293839 0.8188933 0.36105892 prediction 0.682269602715111 Functional Loss - ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57691321 chr16:57691322 nonsynonymous SNV 0.582 2 22 hPsi_associated_SNPs_4458 0 0 1 0 2 Nucleus 0.437867840355189 0.438526858649884 0.6377866 0 hPsi_site_9875 iPseU_CNN:0.6377866;iRNA_PseU:0 9876 chr8 145535402 145535402 1 + A G CHOL 145535401 + 145535381 145535421 41 TGCAGGCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTAC TGCAGGCCCCCTCCCCAGCCTGCAGCAGCTCCAGCCTCTAC < 41bp 0.841103867836299 0.444165950171246 0.5489532 0.27676812 prediction 0.682207735672599 Functional Loss - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535401 chr8:145535402 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_4459 0 0 1 0 1 chromatin 0.438718591710504 0.43871859299582 0.0979064000000001 0 hPsi_site_9876 iPseU_CNN:0.0979064000000001;iRNA_PseU:0 9877 chr9 135906484 135906484 1 + A G STAD 135906483 + 135906463 135906503 41 GACGCATGGTGTGCGTGGAGTACCCGGGAGTGGTGCGTGAT GACGCATGGTGTGCGTGGAGTGCCCGGGAGTGGTGCGTGAT < 41bp 0.841060915807485 0.467072107308841 0.22569522 0.11247924 prediction 0.682121831614969 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135906483 chr9:135906484 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4460 0 0 1 0 1 Ribosome 0.438867773567622 0.439632066199876 0 0 hPsi_site_9877 iPseU_CNN:0;iRNA_PseU:0 9878 chr6 4954710 4954710 1 + A G rs1045074 4954709 + 4954689 4954729 41 GAACACAGAATCTAAAGGGGTATTAGCCAGCCTCGCCTCCC GAACACAGAATCTAAAGGGGTGTTAGCCAGCCTCGCCTCCC < 41bp 0.880556340409853 0.539500299486098 0.75423837 0.3427704 prediction 0.682112081847511 Functional Loss - CDYL ENSG00000153046 UTR3 Human protein_coding chr6:4954709 chr6:4954710 . . 0 22 hPsi_associated_SNPs_4461 0 0 1 0 0 Cytoplasm 0.438718592987041 0.438718593042868 0.50847674 0 hPsi_site_9878 iPseU_CNN:0.50847674;iRNA_PseU:0 9879 chr1 225976390 225976390 1 + A G rs111255620 225976389 + 225976369 225976409 41 GCCTCCCAGAGTGCTGGGATTACAGGCGTAAGCCACCACGC GCCTCCCAGAGTGCTGGGATTGCAGGCGTAAGCCACCACGC < 41bp 0.841031032142831 0.468298555128086 0.32708424 0.2431368 prediction 0.682062064285663 Functional Loss - SRP9 ENSG00000143742 intronic Human protein_coding chr1:225976389 chr1:225976390 . . 0 22 hPsi_associated_SNPs_4462 0 0 1 0 0 Ribosome 0.43789255854631 0.439787636092768 0 0 hPsi_site_9879 iPseU_CNN:0;iRNA_PseU:0 9880 chr4 15690503 15690503 1 + A G UCEC 15690502 + 15690482 15690522 41 GGGCTGAATTGTGCAGCAGTTATGCGGGTAGCATTATCTTC GGGCTGAATTGTGCAGCAGTTGTGCGGGTAGCATTATCTTC < 41bp 0.841002773587614 0.475793954440538 0.48504964 0.2525268 prediction 0.682005547175228 Functional Loss - FAM200B ENSG00000237765 CDS Human protein_coding chr4:15690502 chr4:15690503 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_4463 0 0 0 1 0 Cytosol 0.439364113641546 0.439147182614375 0 0 hPsi_site_9880 iPseU_CNN:0;iRNA_PseU:0 9881 chr22 30163518 30163518 1 + A G LGG 30163517 + 30163497 30163537 41 ATCAAGGCGCGGACGCTATCTACGACCACATCAACGAGGGG ATCAAGGCGCGGACGCTATCTGCGACCACATCAACGAGGGG < 41bp 0.888768800770466 0.547785075664333 0.39335325 0.21269974 prediction 0.681967450212267 Functional Loss - UQCR10 ENSG00000184076 CDS Human protein_coding chr22:30163517 chr22:30163518 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_4464 0 0 1 0 2 Cytosol 0.438720812664931 0.438721463307258 0 0 hPsi_site_9881 iPseU_CNN:0;iRNA_PseU:0 9882 chr11 63764060 63764060 1 + A G LUAD 63764059 + 63764039 63764079 41 GGCCTGACGGCAACTGTTTCTATCGGGCTTTCGGATTCTCC GGCCTGACGGCAACTGTTTCTGTCGGGCTTTCGGATTCTCC < 41bp 0.840900958791413 0.430135802672667 0.8404994 0.7556366 prediction 0.681801917582827 Functional Loss - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63764059 chr11:63764060 nonsynonymous SNV 0.731 1 22 hPsi_associated_SNPs_4465 0 0 1 0 2 Ribosome 0.438719363236039 0.43871828413895 0.1697256 0 hPsi_site_9882 iPseU_CNN:0.1697256;iRNA_PseU:0 9883 chr4 56768585 56768585 1 + A G UCEC 56768584 + 56768564 56768604 41 GTAAGTTACCAACTTGCATTTAACAAACAAGAACTTCGTAA GTAAGTTACCAACTTGCATTTGACAAACAAGAACTTCGTAA < 41bp 0.840897236561935 0.445472980700579 0.68061763 0.20649597 prediction 0.681794473123869 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56768584 chr4:56768585 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_4466 0 0 0 0 1 Cytosol 0.438722219822179 0.438884997577759 0.36123526 0 hPsi_site_9883 iPseU_CNN:0.36123526;iRNA_PseU:0 9884 chr20 37210007 37210007 1 + A G UCEC 37210006 + 37209986 37210026 41 GATCATCTGGCTACGCTTCTTACTTAGCCAAGGTGAGCTTC GATCATCTGGCTACGCTTCTTGCTTAGCCAAGGTGAGCTTC < 41bp 0.875780891245287 0.534938470981789 0.3994305 0.23040465 prediction 0.681684840526995 Functional Loss - ADIG ENSG00000182035 CDS Human protein_coding chr20:37210006 chr20:37210007 synonymous SNV . 0 22 hPsi_associated_SNPs_4467 0 0 0 0 1 nucleolus 0.438718594685115 0.438718752134403 0 0 hPsi_site_9884 iPseU_CNN:0;iRNA_PseU:0 9885 chr6 44414459 44414459 1 + A G rs11572055 44414458 + 44414438 44414478 41 CAAAATTCTGAAGTACAGTTTATATTCTGTCACAGGATTAA CAAAATTCTGAAGTACAGTTTGTATTCTGTCACAGGATTAA < 41bp 0.86729024443189 0.52645332511417 0.43957406 0.30204222 prediction 0.68167383863544 Functional Loss - CDC5L ENSG00000096401 UTR3 Human protein_coding chr6:44414458 chr6:44414459 . . 0 22 hPsi_associated_SNPs_4468 0 0 1 2 0 Nucleus 0.438701557489531 0.438356313633925 0 0 hPsi_site_9885 iPseU_CNN:0;iRNA_PseU:0 9886 chr6 132892276 132892276 1 + A G SKCM 132892275 + 132892255 132892295 41 AGCATTTATGATTTCATGGTTACCATATAGCATTGATTCAT AGCATTTATGATTTCATGGTTGCCATATAGCATTGATTCAT < 41bp 0.864867412263933 0.524037913165465 0.31669623 0.21968552 prediction 0.681658998196936 Functional Loss - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132892275 chr6:132892276 synonymous SNV . 0 22 hPsi_associated_SNPs_4469 0 0 0 0 0 unknown 0.438679172771176 0.438721936609761 0 0 hPsi_site_9886 iPseU_CNN:0;iRNA_PseU:0 9887 chr17 7417036 7417036 1 + A G PCPG 7417035 + 7417015 7417055 41 ACACACCACAGTCTCCAACCTATACCCCAAGCTCACCCAGC ACACACCACAGTCTCCAACCTGTACCCCAAGCTCACCCAGC < 41bp 0.886125567768921 0.545297200374071 0.4046947 0.1619775 prediction 0.6816567347897 Functional Loss - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7417035 chr17:7417036 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_4470 0 0 1 0 0 Nucleus 0.43872176251469 0.438716726205779 0 0 hPsi_site_9887 iPseU_CNN:0;iRNA_PseU:0 9888 chr3 23959939 23959939 1 + A G LIHC 23959938 + 23959918 23959958 41 TGTTTGTGTGTAGGTTACGTTATATATAGGATTCGTGTTCG TGTTTGTGTGTAGGTTACGTTGTATATAGGATTCGTGTTCG < 41bp 0.840826007539874 0.444682151515493 0.49697268 0.31083843 prediction 0.681652015079749 Functional Loss - RPL15 ENSG00000174748 CDS Human protein_coding chr3:23959938 chr3:23959939 nonsynonymous SNV 0.856 0 22 hPsi_associated_SNPs_4471 0 0 1 0 1 Cytosol 0.438718108884785 0.43871601366961 0 0 hPsi_site_9888 iPseU_CNN:0;iRNA_PseU:0 9889 chr1 162546747 162546747 1 + A G OV 162546746 + 162546726 162546766 41 AGCAGGTTGCTGAAAAATATTATGGCAACAAATGCATTATT AGCAGGTTGCTGAAAAATATTGTGGCAACAAATGCATTATT < 41bp 0.840825273455643 0.449243255763158 0.5728819 0.3252573 prediction 0.681650546911286 Functional Loss - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162546746 chr1:162546747 nonsynonymous SNV 0.798 1 22 hPsi_associated_SNPs_4472 0 0 1 0 1 Ribosome 0.438719404641861 0.438719426020587 0.1457638 0 hPsi_site_9889 iPseU_CNN:0.1457638;iRNA_PseU:0 9890 chr11 6867671 6867671 1 + A G rs138867789 6867670 + 6867650 6867690 41 TCCTTGTTGTCTCTCTTTTCTATATATCTTCTAGCCTCACC TCCTTGTTGTCTCTCTTTTCTGTATATCTTCTAGCCTCACC < 41bp 0.872325425850335 0.53155692872945 0.38283846 0.26060563 prediction 0.681536994241769 Functional Loss - OR10A5 ENSG00000166363 CDS Human protein_coding chr11:6867670 chr11:6867671 nonsynonymous SNV 0.566 2 22 hPsi_associated_SNPs_4473 0 0 0 0 0 unknown 0.438718381270175 0.438719006834178 0 0 hPsi_site_9890 iPseU_CNN:0;iRNA_PseU:0 9891 chr7 31735150 31735150 1 + A G UCEC 31735149 + 31735129 31735169 41 GCCTAGAAAGGGAAAAAATGTACAGGCCACCCTGAATGTTG GCCTAGAAAGGGAAAAAATGTGCAGGCCACCCTGAATGTTG < 41bp 0.887384092438962 0.546641593939201 0.59997606 0.28083563 prediction 0.681484996999521 Functional Loss - PPP1R17 ENSG00000106341 CDS Human protein_coding chr7:31735149 chr7:31735150 synonymous SNV . 0 22 hPsi_associated_SNPs_4474 0 0 0 0 2 exosome 0.438382754705716 0.438721820275024 0.19995212 0 hPsi_site_9891 iPseU_CNN:0.19995212;iRNA_PseU:0 9892 chr8 37985908 37985908 1 + A G ESCA 37985907 + 37985887 37985927 41 GAGTACGGAAAGGTGCCTGGTATTTTGAAATCACTGTGGAT GAGTACGGAAAGGTGCCTGGTGTTTTGAAATCACTGTGGAT < 41bp 0.840739908033492 0.426977385072044 0.7315112 0.30208108 prediction 0.681479816066983 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37985907 chr8:37985908 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_4475 0 0 1 0 2 chromatin 0.4386776170936 0.437450691337155 0.4630224 0 hPsi_site_9892 iPseU_CNN:0.4630224;iRNA_PseU:0 9893 chr12 81532965 81532965 1 + A G STAD 81532964 + 81532944 81532984 41 AACCTGGAAGGAGGGTAGAGTACGTACCACTTGTAGAAGAA AACCTGGAAGGAGGGTAGAGTGCGTACCACTTGTAGAAGAA < 41bp 0.840738564948327 0.438833796996598 0.2892456 0.11734149 prediction 0.681477129896653 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81532964 chr12:81532965 nonsynonymous SNV 0.784 4 22 hPsi_associated_SNPs_4476 0 0 0 0 2 cytosol 0.438556746496494 0.438695513726132 0 0 hPsi_site_9893 iPseU_CNN:0;iRNA_PseU:0 9894 chr1 154961060 154961060 1 + A G PCPG 154961059 + 154961039 154961079 41 TCAGTTCCACTCAAAGGAGCTATATGTGGCTGCTGATGAAG TCAGTTCCACTCAAAGGAGCTGTATGTGGCTGCTGATGAAG < 41bp 0.840732340548139 0.433194789147836 0.39069426 0.34713197 prediction 0.681464681096277 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154961059 chr1:154961060 synonymous SNV . 0 22 hPsi_associated_SNPs_4477 0 0 1 0 0 Cytosol 0.438717611521983 0.438718638138908 0 0 hPsi_site_9894 iPseU_CNN:0;iRNA_PseU:0 9895 chr19 39976398 39976398 1 + A G UCEC 39976397 + 39976377 39976417 41 AACCGTACTACCAGCCACCCTACACGCTCGTTTTGGAGCTC AACCGTACTACCAGCCACCCTGCACGCTCGTTTTGGAGCTC < 41bp 0.840707098974662 0.426625101771335 0.38729185 0.24532217 prediction 0.681414197949323 Functional Loss - TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39976397 chr19:39976398 nonsynonymous SNV 0.535 4 22 hPsi_associated_SNPs_4478 0 0 1 0 2 Ribosome 0.438627293891974 0.438636481869066 0 0 hPsi_site_9895 iPseU_CNN:0;iRNA_PseU:0 9896 chr17 48559747 48559747 1 + A C rs140459309 48559746 + 48559726 48559766 41 CGGAGCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGTC CGGAGCTCGCAGCTGAGATGTCCCAGAGGGGCCGGGCTGTC < 41bp 0.863079797528777 0.522396846943575 0.75923264 0.2201244 prediction 0.681365901170405 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48559746 chr17:48559747 nonsynonymous SNV 0.904 4 22 hPsi_associated_SNPs_4479 0 0 1 0 1 Ribosome 0.438752981633946 0.438718690594961 0.51846528 0 hPsi_site_9896 iPseU_CNN:0.51846528;iRNA_PseU:0 9897 chr6 127517254 127517254 1 + A G rs531111738 127517253 + 127517233 127517273 41 CCACAAATGGACATGTCAGTTATTGCTCTGTCTAAACAACA CCACAAATGGACATGTCAGTTGTTGCTCTGTCTAAACAACA < 41bp 0.862545302044124 0.521917974699258 0.4170743 0.33666277 prediction 0.681254654689732 Functional Loss - RSPO3 ENSG00000146374 UTR3 Human protein_coding chr6:127517253 chr6:127517254 . . 0 22 hPsi_associated_SNPs_4480 0 0 0 0 0 exosome 0.43866797097386 0.438734690851428 0 0 hPsi_site_9897 iPseU_CNN:0;iRNA_PseU:0 9898 chr17 38028592 38028592 1 + A G UCEC 38028591 + 38028571 38028611 41 CAAGGTCTTGTATAGGGAGATACAATGATGTATTCTTTAGA CAAGGTCTTGTATAGGGAGATGCAATGATGTATTCTTTAGA < 41bp 0.840611087661744 0.461143596266614 0.38969734 0.19643322 prediction 0.681222175323489 Functional Loss - ZPBP2 ENSG00000186075 CDS Human protein_coding chr17:38028591 chr17:38028592 nonsynonymous SNV 0.974 2 22 hPsi_associated_SNPs_4481 0 0 0 0 1 exosome 0.438717116077295 0.438749040544776 0 0 hPsi_site_9898 iPseU_CNN:0;iRNA_PseU:0 9899 chr16 89592821 89592821 1 + A G rs191022979 89592820 + 89592800 89592840 41 GCAGCTGAAGATGAGCTGAATATCGAGGCCAAGGACAGGAT GCAGCTGAAGATGAGCTGAATGTCGAGGCCAAGGACAGGAT < 41bp 0.840604275262535 0.435804672466459 0.6451746 0.40787965 prediction 0.681208550525071 Functional Loss - SPG7 ENSG00000197912 CDS Human protein_coding chr16:89592820 chr16:89592821 nonsynonymous SNV 0.459 1 22 hPsi_associated_SNPs_4482 1 0 1 0 2 Nucleus 0.438717927736659 0.438717743580287 0.2903492 0 hPsi_site_9899 iPseU_CNN:0.2903492;iRNA_PseU:0 9900 chr17 79080679 79080679 1 + A G BLCA 79080678 + 79080658 79080698 41 GCGGCTTCAAGCAGAGGCCCTACAGTGTGGCCGTGCCCGCC GCGGCTTCAAGCAGAGGCCCTGCAGTGTGGCCGTGCCCGCC < 41bp 0.840594141507249 0.4499919664935 0.4526736 0.3160988 prediction 0.681188283014498 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080678 chr17:79080679 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4483 0 0 1 0 1 Cytosol 0.438718625993257 0.438718698107521 0 0 hPsi_site_9900 iPseU_CNN:0;iRNA_PseU:0 9901 chr2 86683642 86683642 1 + A G rs2030259 86683641 + 86683621 86683661 41 CAGTGGTTTTCAGCAACCGTTATAAATGGAAACCCAGCATC CAGTGGTTTTCAGCAACCGTTGTAAATGGAAACCCAGCATC < 41bp 0.877824792808629 0.537234297875416 0.6796367 0.5663029 prediction 0.681180989866425 Functional Loss - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86683641 chr2:86683642 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_4484 0 0 1 0 2 chromatin 0.438718592961423 0.438718591313183 0.2266676 0 hPsi_site_9901 iPseU_CNN:0.2266676;iRNA_PseU:0 9902 chr15 45556932 45556932 1 + A G SKCM 45556931 + 45556911 45556951 41 TCATCAGAACTGATCTTGGATATACTGTATTTCAGTGGCTG TCATCAGAACTGATCTTGGATGTACTGTATTTCAGTGGCTG < 41bp 0.840582514653098 0.443073241186648 0.3392049 0.33667666 prediction 0.681165029306197 Functional Loss - SLC28A2 ENSG00000137860 CDS Human protein_coding chr15:45556931 chr15:45556932 nonsynonymous SNV 0.828 2 22 hPsi_associated_SNPs_4485 0 0 0 0 2 Nucleus 0.437890783419782 0.438101753393641 0 0 hPsi_site_9902 iPseU_CNN:0;iRNA_PseU:0 9903 chr9 135945943 135945943 1 + A G STAD 135945942 + 135945922 135945962 41 ACCATGCAGATGACATTCAGTACGTTTTCGGGAAGCCCTTC ACCATGCAGATGACATTCAGTGCGTTTTCGGGAAGCCCTTC < 41bp 0.84057269760173 0.432990266443643 0.5269947 0.29221398 prediction 0.68114539520346 Functional Loss - CEL ENSG00000170835 CDS Human protein_coding chr9:135945942 chr9:135945943 nonsynonymous SNV 0.732 4 22 hPsi_associated_SNPs_4486 0 0 0 0 1 exosome 0.438618924872281 0.438521214948209 0.0539894000000001 0 hPsi_site_9903 iPseU_CNN:0.0539894000000001;iRNA_PseU:0 9904 chr1 91989881 91989881 1 + A G UCEC 91989880 + 91989860 91989900 41 TTTAGAAGGCTGGAATGAGGTACCTGATGAAGCTTATGACC TTTAGAAGGCTGGAATGAGGTGCCTGATGAAGCTTATGACC < 41bp 0.874508569768673 0.533950007865826 0.8011298 0.3105993 prediction 0.681117123805693 Functional Loss - CDC7 ENSG00000097046 CDS Human protein_coding chr1:91989880 chr1:91989881 synonymous SNV . 0 22 hPsi_associated_SNPs_4487 0 0 1 0 0 Nucleus 0.438718534793063 0.438718592957891 0.6022596 0 hPsi_site_9904 iPseU_CNN:0.6022596;iRNA_PseU:0 9905 chr19 50548908 50548908 1 + A G rs374171353 50548907 + 50548887 50548927 41 TTCATGCTGGAGAGGAGCCTTATAAGTGTAACGAACGTGGG TTCATGCTGGAGAGGAGCCTTGTAAGTGTAACGAACGTGGG < 41bp 0.840539926463849 0.440526584277742 0.46094775 0.3239588 prediction 0.681079852927697 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548907 chr19:50548908 nonsynonymous SNV 0.939 3 22 hPsi_associated_SNPs_4488 0 0 1 0 0 Cytosol 0.438788617006491 0.438663475305334 0 0 hPsi_site_9905 iPseU_CNN:0;iRNA_PseU:0 9906 chr8 95863869 95863869 1 + A G HNSC 95863868 + 95863848 95863888 41 TAGACAAATTTTAATTGAATTACATGGTATGACTTCAGAGC TAGACAAATTTTAATTGAATTGCATGGTATGACTTCAGAGC < 41bp 0.840530664870128 0.461581496257579 0.28739214 0.2222248 prediction 0.681061329740255 Functional Loss - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95863868 chr8:95863869 synonymous SNV . 0 22 hPsi_associated_SNPs_4489 0 0 1 0 2 Nucleus 0.438719541826179 0.438728105757632 0 0 hPsi_site_9906 iPseU_CNN:0;iRNA_PseU:0 9907 chr5 134235207 134235207 1 + A G COAD 134235206 + 134235186 134235226 41 AGCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAG AGCCAAGAAGAATGTGGTGGTGACTCAAGCCGACCAAATAG < 41bp 0.840518198281996 0.453199838571833 0.6147719 0.19792452 prediction 0.681036396563991 Functional Loss - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134235206 chr5:134235207 synonymous SNV . 0 22 hPsi_associated_SNPs_4490 0 0 0 0 1 Ribosome 0.438719530734563 0.438719347786191 0.2295438 0 hPsi_site_9907 iPseU_CNN:0.2295438;iRNA_PseU:0 9908 chr10 97816912 97816912 1 + A G UCEC 97816911 + 97816891 97816931 41 TGTGGCTTCTTCGAGGATTATACTTCGTCTTTCTCCAACGT TGTGGCTTCTTCGAGGATTATGCTTCGTCTTTCTCCAACGT < 41bp 0.840510093718652 0.445297215112731 0.60754174 0.34239322 prediction 0.681020187437304 Functional Loss - CCNJ ENSG00000107443 CDS Human protein_coding chr10:97816911 chr10:97816912 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_4491 0 0 0 0 4 chromatin 0.438718968296004 0.438716852615971 0.21508348 0 hPsi_site_9908 iPseU_CNN:0.21508348;iRNA_PseU:0 9909 chr6 27925346 27925346 1 + A G UCEC 27925345 + 27925325 27925365 41 ATATTTCTGGCCTTGGGGGCTACTGAATATCTTCTCCTGGC ATATTTCTGGCCTTGGGGGCTGCTGAATATCTTCTCCTGGC < 41bp 0.858936795793395 0.518432333598899 0.58930695 0.29902613 prediction 0.681008924388992 Functional Loss - OR2B6 ENSG00000124657 CDS Human protein_coding chr6:27925345 chr6:27925346 nonsynonymous SNV 0.933 2 22 hPsi_associated_SNPs_4492 0 0 0 0 0 nucleolus 0.43871859299506 0.438718592995086 0.1786139 0 hPsi_site_9909 iPseU_CNN:0.1786139;iRNA_PseU:0 9910 chr7 66774022 66774022 1 + A G PRAD 66774021 + 66774001 66774041 41 CATTGGTCTGTCGGTGCCAGTACATCCTCCTCCATGATGAC CATTGGTCTGTCGGTGCCAGTGCATCCTCCTCCATGATGAC < 41bp 0.880079571446546 0.539575360676776 0.63009375 0.22779012 prediction 0.68100842153954 Functional Loss - STAG3L4 ENSG00000106610 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:66774021 chr7:66774022 . . 0 22 hPsi_associated_SNPs_4493 0 0 1 0 0 unknown 0.438718010652736 0.438718577948855 0.2601875 0 hPsi_site_9910 iPseU_CNN:0.2601875;iRNA_PseU:0 9911 chr19 36370630 36370630 1 + A G rs148319278 36370629 + 36370609 36370649 41 GCCACCTTGGTCCTAGTGTCTATTCCCTGGAATTCACCCTC GCCACCTTGGTCCTAGTGTCTGTTCCCTGGAATTCACCCTC < 41bp 0.840496123956228 0.498727478915742 0.85723317 0.541296 prediction 0.680992247912455 Functional Loss - APLP1 ENSG00000105290 UTR3 Human protein_coding chr19:36370629 chr19:36370630 . . 0 22 hPsi_associated_SNPs_4494 0 0 1 0 0 Endoplasmic reticulum 0.438627809643446 0.438710971775849 0.63187434 0 hPsi_site_9911 iPseU_CNN:0.63187434;iRNA_PseU:0 9912 chr3 111700691 111700691 1 + A G KIRP 111700690 + 111700670 111700710 41 CAGACCTTCCAAACCTGGCTTATAAGAAGCTAAAAGGCAAA CAGACCTTCCAAACCTGGCTTGTAAGAAGCTAAAAGGCAAA < 41bp 0.840495108745282 0.45285659967098 0.2570788 0.24749109 prediction 0.680990217490565 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111700690 chr3:111700691 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_4495 0 0 1 0 1 Ribosome 0.438718487250949 0.438718824301221 0 0 hPsi_site_9912 iPseU_CNN:0;iRNA_PseU:0 9913 chr12 6309700 6309700 1 + A G SKCM 6309699 + 6309679 6309719 41 GAGGCACCAAGTGCATCAAATACCTGCTGTTCGGATTTAAC GAGGCACCAAGTGCATCAAATGCCTGCTGTTCGGATTTAAC < 41bp 0.876389756086715 0.535897289473357 0.29047418 0.1968826 prediction 0.680984933226715 Functional Loss - CD9 ENSG00000010278 CDS Human protein_coding chr12:6309699 chr12:6309700 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4496 0 0 1 0 1 Ribosome 0.439902741628096 0.438967787008025 0 0 hPsi_site_9913 iPseU_CNN:0;iRNA_PseU:0 9914 chr19 54403512 54403512 1 + A G UCEC 54403511 + 54403491 54403531 41 GCCTGTATTTCGTGATGGAGTACGTCACCGGGGGAGACTTG GCCTGTATTTCGTGATGGAGTGCGTCACCGGGGGAGACTTG < 41bp 0.840474367904354 0.426512440104573 0.58404845 0.27584493 prediction 0.680948735808709 Functional Loss - PRKCG ENSG00000126583 CDS Human protein_coding chr19:54403511 chr19:54403512 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_4497 0 0 0 0 1 Cytosol 0.4387142167492 0.438718295148859 0.1680969 0 hPsi_site_9914 iPseU_CNN:0.1680969;iRNA_PseU:0 9915 chr1 110116376 110116376 1 + A G UCEC 110116375 + 110116355 110116395 41 ACAGGTGCTGGAGAATCTGGTAAAAGCACCATTGTGAAACA ACAGGTGCTGGAGAATCTGGTGAAAGCACCATTGTGAAACA < 41bp 0.879397358900653 0.53895243034809 0.73404586 0.26924342 prediction 0.680889857105127 Functional Loss - GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110116375 chr1:110116376 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4498 0 0 1 0 2 Cytosol 0.43885559900616 0.438715230988359 0.46809172 0 hPsi_site_9915 iPseU_CNN:0.46809172;iRNA_PseU:0 9916 chr16 30991447 30991447 1 + A G UCEC 30991446 + 30991426 30991466 41 TGAGTTACCTGCGGCTTACGTACGAGCGGCTGCTGCAGCAG TGAGTTACCTGCGGCTTACGTGCGAGCGGCTGCTGCAGCAG < 41bp 0.840425714148533 0.455669274844231 0.51616454 0.21071583 prediction 0.680851428297066 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30991446 chr16:30991447 nonsynonymous SNV 0.935 4 22 hPsi_associated_SNPs_4499 0 0 1 0 0 Cytosol 0.438620935063899 0.438707755348845 0.03232908 0 hPsi_site_9916 iPseU_CNN:0.03232908;iRNA_PseU:0 9917 chr6 32826143 32826143 1 + A G BLCA 32826142 + 32826122 32826162 41 CTGAGGATCCCTTTCCCAGGTATATGGAACCCTGGGAGGAA CTGAGGATCCCTTTCCCAGGTGTATGGAACCCTGGGAGGAA < 41bp 0.858091865297423 0.517688949001712 0.7989801 0.5247319 prediction 0.680805832591423 Functional Loss - PSMB9 ENSG00000240065 CDS Human protein_coding chr6:32826142 chr6:32826143 synonymous SNV . 0 22 hPsi_associated_SNPs_4500 0 0 0 0 1 Cytosol 0.438718592990597 0.438718592994411 0.5484964 0 hPsi_site_9917 iPseU_CNN:0.5484964;iRNA_PseU:0 9918 chr5 140711133 140711133 1 + A G LUAD 140711132 + 140711112 140711152 41 AGTGGCCCAAATATTTCGTTTAGATTCTTACACAGGAGAAA AGTGGCCCAAATATTTCGTTTGGATTCTTACACAGGAGAAA < 41bp 0.840390491307733 0.454796411596041 0.47741944 0.47598767 prediction 0.680780982615467 Functional Loss - PCDHGA1 ENSG00000204956 CDS Human protein_coding chr5:140711132 chr5:140711133 synonymous SNV . 0 22 hPsi_associated_SNPs_4501 0 0 0 0 0 exosome 0.438712931371885 0.438720261757945 0 0 hPsi_site_9918 iPseU_CNN:0;iRNA_PseU:0 9919 chr4 70146727 70146727 1 + A G COAD 70146726 + 70146706 70146746 41 TACTTAACATACCGTTTGTGTACAGTCTCTGCTTCACTCCT TACTTAACATACCGTTTGTGTGCAGTCTCTGCTTCACTCCT < 41bp 0.840378705631341 0.450056056889784 0.64409995 0.47927856 prediction 0.680757411262682 Functional Loss - UGT2B28 ENSG00000135226 CDS Human protein_coding chr4:70146726 chr4:70146727 nonsynonymous SNV 0.030 3 22 hPsi_associated_SNPs_4502 0 0 0 0 0 exosome 0.438600352156056 0.438415153211678 0.2881999 0 hPsi_site_9919 iPseU_CNN:0.2881999;iRNA_PseU:0 9920 chr10 51768738 51768738 1 + A G OV 51768737 + 51768717 51768757 41 AGCGGTAGAGCCATCCCCATTAAACAGGGCATGCTCTTAAA AGCGGTAGAGCCATCCCCATTGAACAGGGCATGCTCTTAAA < 41bp 0.890098837656517 0.549744391496459 0.5488179 0.3953943 prediction 0.680708892320116 Functional Loss - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51768737 chr10:51768738 nonsynonymous SNV 0.458 3 22 hPsi_associated_SNPs_4503 0 0 1 0 0 chromatin 0.438718592994764 0.438718592996612 0.0976357999999999 0 hPsi_site_9920 iPseU_CNN:0.0976357999999999;iRNA_PseU:0 9921 chr7 21469813 21469813 1 + A G KIRC 21469812 + 21469792 21469832 41 ACATTAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCAC ACATTAGTGAGCTCAGCAGATGCTGGCCAGTATGCAAGCAC < 41bp 0.840339706343226 0.444252716037612 0.5017958 0.11725104 prediction 0.680679412686453 Functional Loss - SP4 ENSG00000105866 CDS Human protein_coding chr7:21469812 chr7:21469813 nonsynonymous SNV 0.475 0 22 hPsi_associated_SNPs_4504 0 0 0 0 0 chromatin 0.439343618658281 0.438780041377636 0.00359160000000003 0 hPsi_site_9921 iPseU_CNN:0.00359160000000003;iRNA_PseU:0 9922 chr20 25655626 25655626 1 + A G rs45461991 25655625 + 25655605 25655645 41 AGCTTGTAACAAAGCAAAGTTACTCTCCTGAGTGTGTCCTC AGCTTGTAACAAAGCAAAGTTGCTCTCCTGAGTGTGTCCTC < 41bp 0.863269554913919 0.522932929363862 0.7986624 0.32481062 prediction 0.680673251100114 Functional Loss - ZNF337-AS1 ENSG00000213742 ncRNA_exonic Human antisense chr20:25655625 chr20:25655626 . . 0 22 hPsi_associated_SNPs_4505 0 0 0 0 0 unknown 0.438717929195568 0.438718695188948 0.5973248 0 hPsi_site_9922 iPseU_CNN:0.5973248;iRNA_PseU:0 9923 chr3 44442777 44442777 1 + A G HNSC 44442776 + 44442756 44442796 41 CCAGCAAATCTCCAGTGGTTTATTCTCACCAAAGCTCAGCA CCAGCAAATCTCCAGTGGTTTGTTCTCACCAAAGCTCAGCA < 41bp 0.889600781014905 0.549287959346854 0.59705234 0.43970624 prediction 0.680625643336103 Functional Loss - TCAIM ENSG00000179152 CDS Human protein_coding chr3:44442776 chr3:44442777 nonsynonymous SNV 0.765 2 22 hPsi_associated_SNPs_4506 0 0 1 0 1 Cytosol 0.439216630287935 0.438578883583096 0.19410468 0 hPsi_site_9923 iPseU_CNN:0.19410468;iRNA_PseU:0 9924 chr19 15839611 15839611 1 + A G UCEC 15839610 + 15839590 15839630 41 TTATTGTGGTCATTGTGCACTATGGCTTTGCCTCTGTCATC TTATTGTGGTCATTGTGCACTGTGGCTTTGCCTCTGTCATC < 41bp 0.840310260447427 0.464692293406488 0.5382122 0.39253384 prediction 0.680620520894854 Functional Loss - OR10H2 ENSG00000171942 CDS Human protein_coding chr19:15839610 chr19:15839611 nonsynonymous SNV 0.974 4 22 hPsi_associated_SNPs_4507 0 0 0 0 0 unknown 0.442954788287248 0.440046571206595 0.0764244000000001 0 hPsi_site_9924 iPseU_CNN:0.0764244000000001;iRNA_PseU:0 9925 chr2 172409927 172409927 1 + A G UCEC 172409926 + 172409906 172409946 41 CCGAGCATTTCTCATGCCCATACATGTTTATTCTGGAATTG CCGAGCATTTCTCATGCCCATGCATGTTTATTCTGGAATTG < 41bp 0.84030757001015 0.43893921835217 0.21493551 0.18940973 prediction 0.6806151400203 Functional Loss - CYBRD1 ENSG00000071967 CDS Human protein_coding chr2:172409926 chr2:172409927 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4508 0 0 1 0 2 Endoplasmic reticulum 0.438380757091939 0.438565812612356 0 0 hPsi_site_9925 iPseU_CNN:0;iRNA_PseU:0 9926 chr18 633332 633332 1 + A G STAD 633331 + 633311 633351 41 AGGCCTGATTTCAAAGATGTTACCTGGGCAGGACAGAGGAC AGGCCTGATTTCAAAGATGTTGCCTGGGCAGGACAGAGGAC < 41bp 0.84029946910517 0.445924095393759 0.25816387 0.16115615 prediction 0.680598938210341 Functional Loss - CLUL1 ENSG00000079101 CDS Human protein_coding chr18:633331 chr18:633332 synonymous SNV . 0 22 hPsi_associated_SNPs_4509 0 0 0 0 1 cytosol 0.438718781176795 0.438718517515359 0 0 hPsi_site_9926 iPseU_CNN:0;iRNA_PseU:0 9927 chr15 99926480 99926480 1 + A G rs564219922 99926479 + 99926459 99926499 41 ACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAAATTAAG ACCCTTCCCCCAAGTTGGAATGTATCCTCCCCCAAATTAAG < 41bp 0.840277451673883 0.464287627093352 0.45758477 0.24584028 prediction 0.680554903347767 Functional Loss - LRRC28 ENSG00000168904 UTR3 Human protein_coding chr15:99926479 chr15:99926480 . . 0 22 hPsi_associated_SNPs_4510 0 0 0 0 0 Cytosol 0.438718592995102 0.438718592995102 0 0 hPsi_site_9927 iPseU_CNN:0;iRNA_PseU:0 9928 chr11 5510780 5510780 1 + A G UCEC 5510779 + 5510759 5510799 41 CATGTGCACATCTTTCTGGCTAATCTCTATGTGCTGGTGCC CATGTGCACATCTTTCTGGCTGATCTCTATGTGCTGGTGCC < 41bp 0.870302936601305 0.53005628729948 0.7035758 0.33404866 prediction 0.680493298603649 Functional Loss - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510779 chr11:5510780 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_4511 0 0 0 0 0 chromatin 0.438593724047803 0.438730744940912 0.4071516 0 hPsi_site_9928 iPseU_CNN:0.4071516;iRNA_PseU:0 9929 chr5 147820745 147820745 1 + A G LUSC 147820744 + 147820724 147820764 41 CTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACA CTTCCCTTGGCTGAGGTCATTGCGAGCTGCAGAGCCCAACA < 41bp 0.891740194154095 0.551502954204833 0.42008066 0.32810488 prediction 0.680474479898524 Functional Loss - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820744 chr5:147820745 synonymous SNV . 0 22 hPsi_associated_SNPs_4512 0 0 1 0 2 Ribosome 0.438734534972705 0.43885003415485 0 0 hPsi_site_9929 iPseU_CNN:0;iRNA_PseU:0 9930 chr21 43833596 43833596 1 + A G SARC 43833595 + 43833575 43833615 41 CTGAGGCTGAGCAATTTAACTAGAGCCTCCTTCGTGAGCCA CTGAGGCTGAGCAATTTAACTGGAGCCTCCTTCGTGAGCCA < 41bp 0.84023066781188 0.464428041673861 0.2592054 0.17343763 prediction 0.68046133562376 Functional Loss - UBASH3A ENSG00000160185 CDS Human protein_coding chr21:43833595 chr21:43833596 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4513 0 0 0 0 2 exosome 0.438718592052534 0.438718585018781 0 0 hPsi_site_9930 iPseU_CNN:0;iRNA_PseU:0 9931 chr21 46057391 46057391 1 + A G rs9306108 46057390 + 46057370 46057410 41 CTGCACTGACTCTTGGCGGGTAGTCGACTGCCCAGAGAGCT CTGCACTGACTCTTGGCGGGTGGTCGACTGCCCAGAGAGCT < 41bp 0.878838838472022 0.538625316498849 0.6014366 0.3082987 prediction 0.680427043946346 Functional Loss - KRTAP10-10 ENSG00000221859 CDS Human protein_coding chr21:46057390 chr21:46057391 synonymous SNV . 0 22 hPsi_associated_SNPs_4514 0 0 0 0 0 unknown 0.438719280922079 0.438718592628301 0.2028732 0 hPsi_site_9931 iPseU_CNN:0.2028732;iRNA_PseU:0 9932 chr11 64217575 64217575 1 + A G LIHC 64217574 + 64217554 64217594 41 GGGATGCCCGGCTCGTTTAATATCACTGATGTTGAGAGACA GGGATGCCCGGCTCGTTTAATGTCACTGATGTTGAGAGACA < 41bp 0.840207233959694 0.459825261370519 0.36072677 0.2911439 prediction 0.680414467919388 Functional Loss - LOC100996455 ENSG00000181908 CDS Human lincRNA chr11:64217574 chr11:64217575 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4515 0 0 0 0 0 unknown 0.438742639998567 0.438725368841971 0 0 hPsi_site_9932 iPseU_CNN:0;iRNA_PseU:0 9933 chr6 57048922 57048922 1 + A G HNSC 57048921 + 57048901 57048941 41 CTCTGACAAGGCCATCAAGCTATTAGAGCATTCTAAAGGAG CTCTGACAAGGCCATCAAGCTGTTAGAGCATTCTAAAGGAG < 41bp 0.840202864872891 0.456708558242502 0.28926396 0.20217672 prediction 0.680405729745783 Functional Loss - BAG2 ENSG00000112208 CDS Human protein_coding chr6:57048921 chr6:57048922 synonymous SNV . 0 22 hPsi_associated_SNPs_4516 0 0 1 0 0 Ribosome 0.438107841093376 0.438532061468209 0 0 hPsi_site_9933 iPseU_CNN:0;iRNA_PseU:0 9934 chr4 79763573 79763573 1 + A G HNSC 79763572 + 79763552 79763592 41 GAATCAAATGAATAAGAAGCTACAGACGGGTTTTACAGAAC GAATCAAATGAATAAGAAGCTGCAGACGGGTTTTACAGAAC < 41bp 0.84017719061169 0.443270344368913 0.3709489 0.24952313 prediction 0.68035438122338 Functional Loss - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79763572 chr4:79763573 synonymous SNV . 0 22 hPsi_associated_SNPs_4517 0 0 1 3 1 Cytosol 0.438650244293892 0.438690997149974 0 0 hPsi_site_9934 iPseU_CNN:0;iRNA_PseU:0 9935 chr17 3119777 3119777 1 + A G LUSC 3119776 + 3119756 3119796 41 CAATGTTAAATCCTTTCATCTACAGTCTGAGAAATCGGGAC CAATGTTAAATCCTTTCATCTGCAGTCTGAGAAATCGGGAC < 41bp 0.86906906748525 0.528904108989826 0.44044033 0.28933632 prediction 0.68032991699085 Functional Loss - OR1A1 ENSG00000172146 CDS Human protein_coding chr17:3119776 chr17:3119777 nonsynonymous SNV 0.001 4 22 hPsi_associated_SNPs_4518 0 0 0 0 0 unknown 0.438693993426164 0.439443267478251 0 0 hPsi_site_9935 iPseU_CNN:0;iRNA_PseU:0 9936 chr16 57144808 57144808 1 + A G SKCM 57144807 + 57144787 57144827 41 GACCCCTTCTGTGTCCTCTTTACAGAGAACAATGGCAGATG GACCCCTTCTGTGTCCTCTTTGCAGAGAACAATGGCAGATG < 41bp 0.840140794948492 0.425606720252145 0.76258737 0.5348079 prediction 0.680281589896985 Functional Loss - CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144807 chr16:57144808 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_4519 0 0 0 0 1 chromatin 0.438709236621523 0.438704282631521 0.45555894 0 hPsi_site_9936 iPseU_CNN:0.45555894;iRNA_PseU:0 9937 chr1 207881557 207881557 1 + A G rs6683902 207881556 + 207881536 207881576 41 GGTCACTCATCTGCTGAATGTATCCTCTCGGGCAATACTGC GGTCACTCATCTGCTGAATGTGTCCTCTCGGGCAATACTGC < 41bp 0.840137462369648 0.461150243898346 0.35644 0.315057 prediction 0.680274924739295 Functional Loss - CR1L ENSG00000197721 CDS Human protein_coding chr1:207881556 chr1:207881557 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4520 0 0 1 0 2 Endoplasmic reticulum 0.438718592986953 0.438718589028471 0 0 hPsi_site_9937 iPseU_CNN:0;iRNA_PseU:0 9938 chr21 45175603 45175603 1 + A G STAD 45175602 + 45175582 45175622 41 GCCTGTGAGAAGACCGTGTCTACCTTGCACCACGTTCTGCA GCCTGTGAGAAGACCGTGTCTGCCTTGCACCACGTTCTGCA < 41bp 0.840085972586961 0.427052667671842 0.75328594 0.272686 prediction 0.680171945173923 Functional Loss - PDXK ENSG00000160209 CDS Human protein_coding chr21:45175602 chr21:45175603 nonsynonymous SNV 0.874 0 22 hPsi_associated_SNPs_4521 0 0 1 0 2 Ribosome 0.444235715471952 0.435663874743455 0.50657188 0 hPsi_site_9938 iPseU_CNN:0.50657188;iRNA_PseU:0 9939 chr16 31191482 31191482 1 + A G rs929867 31191481 + 31191461 31191501 41 CTCAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAACTT CTCAGTCCTCCAGGCGTCGGTGCTCAGCGGTGTTGGAACTT < 41bp 0.847506053729088 0.507425108428421 0.8640828 0.28262717 prediction 0.680161890601334 Functional Loss - FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191481 chr16:31191482 . . 0 22 hPsi_associated_SNPs_4522 1 0 1 0 1 Cytosol 0.439667079872305 0.437789800908234 0.7281656 0 hPsi_site_9939 iPseU_CNN:0.7281656;iRNA_PseU:0 9940 chr12 55794696 55794696 1 + A G LUSC 55794695 + 55794675 55794715 41 TGTGGCTATCTGCAAACCTCTACATTATACAACCATCATGA TGTGGCTATCTGCAAACCTCTGCATTATACAACCATCATGA < 41bp 0.840076645617865 0.471599970325241 0.3008607 0.25099933 prediction 0.680153291235729 Functional Loss - OR6C65 ENSG00000205328 CDS Human protein_coding chr12:55794695 chr12:55794696 synonymous SNV . 0 22 hPsi_associated_SNPs_4523 0 0 0 0 0 unknown 0.438788726813235 0.438798214259927 0 0 hPsi_site_9940 iPseU_CNN:0;iRNA_PseU:0 9941 chr22 42114160 42114160 1 + A G rs146685300 42114159 + 42114139 42114179 41 CTGTTACCTTTATGGGAAGCTATACTCCTCACCAGTGGCAG CTGTTACCTTTATGGGAAGCTGTACTCCTCACCAGTGGCAG < 41bp 0.883396508767069 0.543373825901656 0.60776246 0.2534594 prediction 0.680045365730826 Functional Loss - MEI1 ENSG00000167077 CDS Human protein_coding chr22:42114159 chr22:42114160 synonymous SNV . 0 22 hPsi_associated_SNPs_4524 0 0 0 1 1 exosome 0.438718557256496 0.438718589995624 0.21552492 0 hPsi_site_9941 iPseU_CNN:0.21552492;iRNA_PseU:0 9942 chr4 509832 509832 1 + A G UCEC 509831 + 509811 509851 41 ACTGGCGATAGCACTTGGCTTACCGATTCCAAAAGACAGTG ACTGGCGATAGCACTTGGCTTGCCGATTCCAAAAGACAGTG < 41bp 0.840017912849608 0.426473748422073 0.5388012 0.2053408 prediction 0.680035825699216 Functional Loss - PIGG ENSG00000174227 CDS Human protein_coding chr4:509831 chr4:509832 synonymous SNV . 0 22 hPsi_associated_SNPs_4525 0 0 1 0 1 Nucleus 0.43874799417925 0.438760569282957 0.0776024 0 hPsi_site_9942 iPseU_CNN:0.0776024;iRNA_PseU:0 9943 chr3 167512603 167512603 1 + A G LUSC 167512602 + 167512582 167512622 41 AGAAGCAAAAAGTAGAAGTATACCTGCCCAGGTATGAGGTT AGAAGCAAAAAGTAGAAGTATGCCTGCCCAGGTATGAGGTT < 41bp 0.885449969269439 0.545449858077832 0.79920363 0.35715997 prediction 0.680000222383214 Functional Loss - SERPINI1 ENSG00000163536 CDS Human protein_coding chr3:167512602 chr3:167512603 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_4526 0 0 1 0 1 Endoplasmic reticulum 0.438718585156526 0.438718485435844 0.59840726 0 hPsi_site_9943 iPseU_CNN:0.59840726;iRNA_PseU:0 9944 chr6 29408157 29408157 1 + A G LUAD 29408156 + 29408136 29408176 41 CAGCCATGGCCTATGACCGCTATGCAGCCATCTGTGAACCC CAGCCATGGCCTATGACCGCTGTGCAGCCATCTGTGAACCC < 41bp 0.881207789832051 0.541216159071254 0.7256931 0.37033063 prediction 0.679983261521593 Functional Loss - OR10C1 ENSG00000206474 CDS Human protein_coding chr6:29408156 chr6:29408157 nonsynonymous SNV 0.600 0 22 hPsi_associated_SNPs_4527 0 0 0 0 0 unknown 0.438687809349701 0.438722825920051 0.4513862 0 hPsi_site_9944 iPseU_CNN:0.4513862;iRNA_PseU:0 9945 chr11 65113772 65113772 1 + A G COAD 65113771 + 65113751 65113791 41 TGATGGCGGCAGTGAAGACATACCGCTGGCAGTGCATCGAG TGATGGCGGCAGTGAAGACATGCCGCTGGCAGTGCATCGAG < 41bp 0.893770162877592 0.553781203283648 0.20693392 0.18729782 prediction 0.679977919187889 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65113771 chr11:65113772 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_4528 0 0 1 0 2 Ribosome 0.438679368630129 0.438780623726106 0 0 hPsi_site_9945 iPseU_CNN:0;iRNA_PseU:0 9946 chr15 74219660 74219660 1 + A C rs546795681 74219659 + 74219639 74219679 41 CCTACCCGCAGCAGTTCCCCTACCCGCAGGCGCCCTTCGTC CCTACCCGCAGCAGTTCCCCTCCCCGCAGGCGCCCTTCGTC < 41bp 0.839980470728122 0.491799915382902 0.6543262 0.1956071 prediction 0.679960941456244 Functional Loss - LOXL1 ENSG00000129038 CDS Human protein_coding chr15:74219659 chr15:74219660 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4529 0 0 0 0 0 exosome 0.438718578663164 0.438718592995102 0.3086524 0 hPsi_site_9946 iPseU_CNN:0.3086524;iRNA_PseU:0 9947 chr8 20077912 20077912 1 + A G UCEC 20077911 + 20077891 20077931 41 CTCGAGACTCTGCAAAGCATTAGCTGCTGCTTCTGCATTGC CTCGAGACTCTGCAAAGCATTGGCTGCTGCTTCTGCATTGC < 41bp 0.839915767965286 0.448814290010342 0.48133847 0.3376878 prediction 0.679831535930573 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20077911 chr8:20077912 stoploss 0.796 0 22 hPsi_associated_SNPs_4530 0 0 1 1 0 Ribosome 0.433898306375954 0.43620182716476 0 0 hPsi_site_9947 iPseU_CNN:0;iRNA_PseU:0 9948 chr11 71821226 71821226 1 + T C LAML 71821227 - 71821207 71821247 41 GATGATGAAGATGATGAGGATAGTGAAGAGGACTCAGAGGA GATGATGAAGATGATGAGGATGGTGAAGAGGACTCAGAGGA < 41bp 0.839909039467641 0.431895215658476 0.22816503 0.19845498 prediction 0.679818078935283 Functional Loss - ANAPC15 ENSG00000110200 CDS Human protein_coding chr11:71821227 chr11:71821226 nonsynonymous SNV 0.966 3 22 hPsi_associated_SNPs_4531 0 0 1 0 2 Cytosol 0.437825383610709 0.438718587631593 0 0 hPsi_site_9948 iPseU_CNN:0;iRNA_PseU:0 9949 chrX 107310293 107310293 1 + A G LUAD 107310292 + 107310272 107310312 41 AGCCAGCAGACAGTGGAATTTACATCTGCGATGTTAACAAC AGCCAGCAGACAGTGGAATTTGCATCTGCGATGTTAACAAC < 41bp 0.839890366230929 0.434450104704606 0.31960738 0.2519074 prediction 0.679780732461858 Functional Loss - VSIG1 ENSG00000101842 CDS Human protein_coding chrX:107310292 chrX:107310293 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_4532 0 0 0 0 1 Nucleus 0.438551467505138 0.438718447204193 0 0 hPsi_site_9949 iPseU_CNN:0;iRNA_PseU:0 9950 chr11 6806610 6806610 1 + A G rs74057918 6806609 + 6806589 6806629 41 GGGTGGTGCTGAGGACCTCCTACTGGCCTTCATGGCCTATG GGGTGGTGCTGAGGACCTCCTGCTGGCCTTCATGGCCTATG < 41bp 0.882401166105478 0.542571194259339 0.5962872 0.24343804 prediction 0.67965994369228 Functional Loss - OR2AG1 ENSG00000170803 CDS Human other chr11:6806609 chr11:6806610 synonymous SNV . 0 22 hPsi_associated_SNPs_4533 0 0 0 0 0 unknown 0.438720628356948 0.438770919350623 0.1925744 0 hPsi_site_9950 iPseU_CNN:0.1925744;iRNA_PseU:0 9951 chr2 217329374 217329374 1 + A G LUSC 217329373 + 217329353 217329393 41 TTCAACAGAACAGCTGAAGCTAAAATCCCATCTGTCATGTA TTCAACAGAACAGCTGAAGCTGAAATCCCATCTGTCATGTA < 41bp 0.89460145029133 0.554795100135522 0.6381581 0.37680355 prediction 0.679612700311617 Functional Loss - SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217329373 chr2:217329374 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4534 0 0 0 0 2 chromatin 0.438535361367502 0.438723880524469 0.2763162 0 hPsi_site_9951 iPseU_CNN:0.2763162;iRNA_PseU:0 9952 chr17 76167797 76167797 1 + A G CESC 76167796 + 76167776 76167816 41 TGGGGTCCCCCACCCACCTGTACCCTGCTGTGCTCCCCCTG TGGGGTCCCCCACCCACCTGTGCCCTGCTGTGCTCCCCCTG < 41bp 0.839799744606739 0.450736306650232 0.62018704 0.35877365 prediction 0.679599489213479 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167796 chr17:76167797 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4535 0 0 1 0 0 Ribosome 0.438691932957592 0.43848368635801 0.24037408 0 hPsi_site_9952 iPseU_CNN:0.24037408;iRNA_PseU:0 9953 chr19 44515309 44515309 1 + A G LUSC 44515308 + 44515288 44515328 41 GTGAGGAGTGTGGGAAGGGCTACATTAGTAAGTCAGGTCTT GTGAGGAGTGTGGGAAGGGCTGCATTAGTAAGTCAGGTCTT < 41bp 0.839761510474333 0.480280256022241 0.32396144 0.30962935 prediction 0.679523020948667 Functional Loss - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515308 chr19:44515309 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_4536 0 0 0 0 0 cytosol 0.438718128683362 0.438718042193089 0 0 hPsi_site_9953 iPseU_CNN:0;iRNA_PseU:0 9954 chr1 212799154 212799154 1 + T C LUSC 212799155 - 212799135 212799175 41 CCGATGGTGGCCGCCCCAGCTATGGCTGCGCTCACCTGTCC CCGATGGTGGCCGCCCCAGCTGTGGCTGCGCTCACCTGTCC < 41bp 0.868189002696804 0.528445503538469 0.7401905 0.34337494 prediction 0.679486998316671 Functional Loss - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212799155 chr1:212799154 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4537 0 0 0 0 0 exosome 0.438717084394031 0.438720149873909 0.480381 0 hPsi_site_9954 iPseU_CNN:0.480381;iRNA_PseU:0 9955 chr7 143701729 143701729 1 + A G UCEC 143701728 + 143701708 143701748 41 TTCCTATTCCCACTCTTTATTACTGTCCTGTCCTACGGATG TTCCTATTCCCACTCTTTATTGCTGTCCTGTCCTACGGATG < 41bp 0.839725160074434 0.45974613673378 0.40290144 0.27916652 prediction 0.679450320148868 Functional Loss - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701728 chr7:143701729 nonsynonymous SNV 0.230 2 22 hPsi_associated_SNPs_4538 0 0 0 0 0 unknown 0.438718593895558 0.438718593187 0 0 hPsi_site_9955 iPseU_CNN:0;iRNA_PseU:0 9956 chr5 176297514 176297514 1 + A G COAD 176297513 + 176297493 176297533 41 GACCTGGACACCCGCAACTGTACCAGTGACCTCTGTGTACA GACCTGGACACCCGCAACTGTGCCAGTGACCTCTGTGTACA < 41bp 0.839711844140203 0.432594700725708 0.67181695 0.34855402 prediction 0.679423688280405 Functional Loss - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176297513 chr5:176297514 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_4539 0 0 0 0 1 exosome 0.439340012376494 0.43874471834688 0.3436339 0 hPsi_site_9956 iPseU_CNN:0.3436339;iRNA_PseU:0 9957 chr13 114288239 114288239 1 + A G CESC 114288238 + 114288218 114288258 41 AAAACATAAGACGGCGCGTCTACGATGCCTTAAACGTGCTA AAAACATAAGACGGCGCGTCTGCGATGCCTTAAACGTGCTA < 41bp 0.839688976687368 0.432601890502597 0.43248272 0.46585017 prediction 0.679377953374735 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114288238 chr13:114288239 nonsynonymous SNV 0.915 4 22 hPsi_associated_SNPs_4540 0 0 1 0 1 Cytosol 0.438717716180202 0.438717193030291 0 0 hPsi_site_9957 iPseU_CNN:0;iRNA_PseU:0 9958 chr19 37854405 37854405 1 + A C STAD 37854404 + 37854384 37854424 41 CGGCAGAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTC CGGCAGAAGCCTAACCTGTTTCGGCACAAGAGGGCACACTC < 41bp 0.839681667640434 0.499326337775796 0.7351731 0.39271605 prediction 0.679363335280868 Functional Loss - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854404 chr19:37854405 synonymous SNV . 0 22 hPsi_associated_SNPs_4541 0 0 0 0 0 exosome 0.438718592993837 0.438718592995087 0.4703462 0 hPsi_site_9958 iPseU_CNN:0.4703462;iRNA_PseU:0 9959 chr14 92597390 92597390 1 + A G COAD 92597389 + 92597369 92597409 41 AAGAAGAATCTGCCCTTTGCTATCTTCTCCAAGTTGATGAG AAGAAGAATCTGCCCTTTGCTGTCTTCTCCAAGTTGATGAG < 41bp 0.886509717069646 0.546899672239188 0.43911046 0.2473633 prediction 0.679220089660917 Functional Loss - CPSF2 ENSG00000165934 CDS Human protein_coding chr14:92597389 chr14:92597390 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4542 0 0 1 0 2 Ribosome 0.438718592129511 0.438718593917559 0 0 hPsi_site_9959 iPseU_CNN:0;iRNA_PseU:0 9960 chrX 74520740 74520740 1 + A G STAD 74520739 + 74520719 74520759 41 ATTGAAGCTGTAAAGGTTCTTATAGAACATGGAGTTCAACC ATTGAAGCTGTAAAGGTTCTTGTAGAACATGGAGTTCAACC < 41bp 0.839605426808334 0.451771527287696 0.45909595 0.36641252 prediction 0.679210853616667 Functional Loss - UPRT ENSG00000094841 CDS Human protein_coding chrX:74520739 chrX:74520740 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4543 0 0 0 1 2 Ribosome 0.43874193399525 0.438715049696608 0 0 hPsi_site_9960 iPseU_CNN:0;iRNA_PseU:0 9961 chr7 128505565 128505565 1 + A G LUAD 128505564 + 128505544 128505584 41 TCCCCTCCAAGGAGCACCCATATGACGCCGCCAAGGACTCC TCCCCTCCAAGGAGCACCCATGTGACGCCGCCAAGGACTCC < 41bp 0.890842476111614 0.551250984831658 0.22336608 0.20526981 prediction 0.679182982559913 Functional Loss - ATP6V1F ENSG00000128524 CDS Human protein_coding chr7:128505564 chr7:128505565 nonsynonymous SNV 0.848 4 22 hPsi_associated_SNPs_4544 0 0 1 0 0 Ribosome 0.4387185929949 0.438718592959171 0 0 hPsi_site_9961 iPseU_CNN:0;iRNA_PseU:0 9962 chr2 70314905 70314905 1 + A G UCEC 70314904 + 70314884 70314924 41 CGGTGTGACTGAAAGTGGACTAAATGTGACTCTCACCATTC CGGTGTGACTGAAAGTGGACTGAATGTGACTCTCACCATTC < 41bp 0.83956307390997 0.466014709574146 0.32545382 0.23404014 prediction 0.67912614781994 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70314904 chr2:70314905 synonymous SNV . 0 22 hPsi_associated_SNPs_4545 0 0 1 0 0 Cytosol 0.438613990183867 0.438746945768749 0 0 hPsi_site_9962 iPseU_CNN:0;iRNA_PseU:0 9963 chr1 32568174 32568174 1 + A G PRAD 32568173 + 32568153 32568193 41 CCCTCATCCTCTTCAGCAACTACTATGCCTTCTTCAAGCTG CCCTCATCCTCTTCAGCAACTGCTATGCCTTCTTCAAGCTG < 41bp 0.876313760367851 0.536768160451477 0.65826416 0.43503124 prediction 0.679091199832749 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32568173 chr1:32568174 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4546 0 0 1 0 0 chromatin 0.438716072790162 0.438718094453004 0.31652832 0 hPsi_site_9963 iPseU_CNN:0.31652832;iRNA_PseU:0 9964 chr2 101885758 101885758 1 + A G LUSC 101885757 + 101885737 101885777 41 TAATGTACAGGATTTGTTTATAGAAGTGCAGGCATTCTGTA TAATGTACAGGATTTGTTTATGGAAGTGCAGGCATTCTGTA < 41bp 0.871498547193671 0.531968504318586 0.25427645 0.16923913 prediction 0.679060085750171 Functional Loss - CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101885757 chr2:101885758 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4547 0 0 1 0 1 Ribosome 0.438692539923552 0.437548896027184 0 0 hPsi_site_9964 iPseU_CNN:0;iRNA_PseU:0 9965 chr2 61391621 61391621 1 + A G rs13431847 61391620 + 61391600 61391640 41 GATCTTGGGAATGAATACCCTACACCTCGAAGCTATACTCG GATCTTGGGAATGAATACCCTGCACCTCGAAGCTATACTCG < 41bp 0.839508311033315 0.453021472659778 0.45948794 0.2089015 prediction 0.679016622066631 Functional Loss - C2orf74 ENSG00000237651 CDS Human protein_coding chr2:61391620 chr2:61391621 nonsynonymous SNV 0.176 0 22 hPsi_associated_SNPs_4548 0 0 1 0 0 cytosol 0.438718592773402 0.438718595042274 0 0 hPsi_site_9965 iPseU_CNN:0;iRNA_PseU:0 9966 chr15 78805582 78805582 1 + A G UCEC 78805581 + 78805561 78805601 41 ATGACCAAAACTTTCATGTCTACGTTTCAAAAACCAAAGAT ATGACCAAAACTTTCATGTCTGCGTTTCAAAAACCAAAGAT < 41bp 0.839503480345569 0.442193524814532 0.34549835 0.22615647 prediction 0.679006960691137 Functional Loss - HYKK ENSG00000188266 CDS Human protein_coding chr15:78805581 chr15:78805582 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4549 0 0 0 0 0 nucleolus 0.438652743684552 0.438570625805399 0 0 hPsi_site_9966 iPseU_CNN:0;iRNA_PseU:0 9967 chr9 32784518 32784518 1 + A G SKCM 32784517 + 32784497 32784537 41 GGGAGCTCAGATGAGCTGGCTAAGAAGGCGGGCCTCAGGGG GGGAGCTCAGATGAGCTGGCTGAGAAGGCGGGCCTCAGGGG < 41bp 0.83949781164299 0.443494755505496 0.32631177 0.24783266 prediction 0.678995623285981 Functional Loss - TMEM215 ENSG00000188133 CDS Human protein_coding chr9:32784517 chr9:32784518 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4550 0 0 0 0 0 exosome 0.438717933819069 0.438716734005715 0 0 hPsi_site_9967 iPseU_CNN:0;iRNA_PseU:0 9968 chr12 130649199 130649199 1 + A G HNSC 130649198 + 130649178 130649218 41 AGAAAACTCACCACGGGAAATATGAGATCCCTGCCCAGTCG AGAAAACTCACCACGGGAAATGTGAGATCCCTGCCCAGTCG < 41bp 0.839484001223256 0.455215736423207 0.56524223 0.6213465 prediction 0.678968002446512 Functional Loss - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130649198 chr12:130649199 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_4551 0 0 0 0 0 exosome 0.438718592991417 0.438718592988879 0 0 hPsi_site_9968 iPseU_CNN:0;iRNA_PseU:0 9969 chr3 137717830 137717830 1 + A G GBM 137717829 + 137717809 137717849 41 AGACTTGTACAACAACCCCGTAACAGCTGTTTTCAACTACC AGACTTGTACAACAACCCCGTGACAGCTGTTTTCAACTACC < 41bp 0.839473765698072 0.452200791311101 0.658082 0.30379516 prediction 0.678947531396145 Functional Loss - CLDN18 ENSG00000066405 CDS Human protein_coding chr3:137717829 chr3:137717830 synonymous SNV . 0 22 hPsi_associated_SNPs_4552 0 0 0 0 0 Endoplasmic reticulum 0.438721439010654 0.439099797408231 0.316164 0 hPsi_site_9969 iPseU_CNN:0.316164;iRNA_PseU:0 9970 chr1 245005310 245005310 1 + A G STAD 245005309 + 245005289 245005329 41 GCGCCCGGCATTCAATATTGTATGGTTCATTAGGATCTGTT GCGCCCGGCATTCAATATTGTGTGGTTCATTAGGATCTGTT < 41bp 0.839433575256324 0.440233325537836 0.7056525 0.35022002 prediction 0.678867150512649 Functional Loss - COX20 ENSG00000203667 CDS Human protein_coding chr1:245005309 chr1:245005310 nonsynonymous SNV 0.862 2 22 hPsi_associated_SNPs_4553 0 0 0 0 2 Ribosome 0.43852765333662 0.438717433859314 0.411305 0 hPsi_site_9970 iPseU_CNN:0.411305;iRNA_PseU:0 9971 chr3 122578983 122578983 1 + A G UCEC 122578982 + 122578962 122579002 41 CTCCTCCTGTTTTCGGGAGCTACACTGTCATCCACGTGGTT CTCCTCCTGTTTTCGGGAGCTGCACTGTCATCCACGTGGTT < 41bp 0.888839631843516 0.549432247324802 0.60618484 0.27943724 prediction 0.678814769037429 Functional Loss - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122578982 chr3:122578983 nonsynonymous SNV 0.868 1 22 hPsi_associated_SNPs_4554 0 0 0 0 2 Endoplasmic reticulum 0.438794018911556 0.440204795837896 0.21236968 0 hPsi_site_9971 iPseU_CNN:0.21236968;iRNA_PseU:0 9972 chr7 142566032 142566032 1 + A G HNSC 142566031 + 142566011 142566051 41 ATTACATCGACCCCTCCACCTACGAGGACCCCTGTCAGGCC ATTACATCGACCCCTCCACCTGCGAGGACCCCTGTCAGGCC < 41bp 0.839405279958518 0.426196020361858 0.44709656 0.28399855 prediction 0.678810559917037 Functional Loss - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142566031 chr7:142566032 nonsynonymous SNV 0.892 1 22 hPsi_associated_SNPs_4555 0 0 0 0 2 Endoplasmic reticulum 0.438830931557547 0.438721389231896 0 0 hPsi_site_9972 iPseU_CNN:0;iRNA_PseU:0 9973 chr16 21994469 21994469 1 + A G HNSC 21994468 + 21994448 21994488 41 GCAAGTGGAAATTTGGGACATACACCTTTTGTTGATGAGTT GCAAGTGGAAATTTGGGACATGCACCTTTTGTTGATGAGTT < 41bp 0.869810154231936 0.530407776880155 0.4377299 0.29190373 prediction 0.678804754703561 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21994468 chr16:21994469 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_4556 0 0 1 0 1 Ribosome 0.438717875043455 0.438718669277317 0 0 hPsi_site_9973 iPseU_CNN:0;iRNA_PseU:0 9974 chr4 71472130 71472130 1 + A G PAAD 71472129 + 71472109 71472149 41 CTAGAAAACCCAGCTTTCCTTACAGAGCTAGAACCTGCTCC CTAGAAAACCCAGCTTTCCTTGCAGAGCTAGAACCTGCTCC < 41bp 0.839368537731259 0.443937884452402 0.717772 0.40627024 prediction 0.678737075462517 Functional Loss - AMBN ENSG00000178522 CDS Human protein_coding chr4:71472129 chr4:71472130 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4557 0 0 0 0 0 exosome 0.438776072687085 0.439398221883438 0.435544 0 hPsi_site_9974 iPseU_CNN:0.435544;iRNA_PseU:0 9975 chr10 102684454 102684454 1 + A G rs34653806 102684453 + 102684433 102684473 41 GCTTTGGAAGTTGTGCCATGTATCCCAAGCCCTGCAGCACC GCTTTGGAAGTTGTGCCATGTGTCCCAAGCCCTGCAGCACC < 41bp 0.839326918312208 0.425597018251165 0.3451838 0.19717357 prediction 0.678653836624415 Functional Loss - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684453 chr10:102684454 nonsynonymous SNV 0.930 0 22 hPsi_associated_SNPs_4558 0 0 1 0 0 Nucleus 0.438718592857951 0.438718593010739 0 0 hPsi_site_9975 iPseU_CNN:0;iRNA_PseU:0 9976 chr11 124007317 124007317 1 + A G UCEC 124007316 + 124007296 124007336 41 GGAGAAGTATGCCTCAAATATACACTCCAGGGCAAGACTTT GGAGAAGTATGCCTCAAATATGCACTCCAGGGCAAGACTTT < 41bp 0.839299276846117 0.425117674171418 0.71234083 0.33321828 prediction 0.678598553692233 Functional Loss - VWA5A ENSG00000110002 CDS Human protein_coding chr11:124007316 chr11:124007317 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4559 0 0 0 0 2 nucleus 0.4387184908965 0.438719818433912 0.42468166 0 hPsi_site_9976 iPseU_CNN:0.42468166;iRNA_PseU:0 9977 chr14 89307466 89307466 1 + A G BLCA 89307465 + 89307445 89307485 41 CCAGGCACTATGGAACAGGCTATCAGAACACCCAGAACCGC CCAGGCACTATGGAACAGGCTGTCAGAACACCCAGAACCGC < 41bp 0.839267313259156 0.42824515789588 0.6520851 0.45690393 prediction 0.678534626518313 Functional Loss - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307465 chr14:89307466 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_4560 0 0 1 0 2 Nucleus 0.438726126496829 0.438724450564288 0.3041702 0 hPsi_site_9977 iPseU_CNN:0.3041702;iRNA_PseU:0 9978 chr20 3542977 3542977 1 + A G COAD 3542976 + 3542956 3542996 41 GTGCCCTTGTGCAAGGGGGTTACGGCCATAGCAGTGTTTAC GTGCCCTTGTGCAAGGGGGTTGCGGCCATAGCAGTGTTTAC < 41bp 0.839222112539369 0.425375950643097 0.63808686 0.27524906 prediction 0.678444225078738 Functional Loss - ATRN ENSG00000088812 CDS Human protein_coding chr20:3542976 chr20:3542977 nonsynonymous SNV 0.970 4 22 hPsi_associated_SNPs_4561 0 0 1 0 1 Ribosome 0.438718548658014 0.43871242533565 0.27617372 0 hPsi_site_9978 iPseU_CNN:0.27617372;iRNA_PseU:0 9979 chr9 100190780 100190780 1 + A G rs1381532 100190779 + 100190759 100190799 41 AGATCTGGTTTCAAAGATGCTACGAGCTGTTCTGCAGTCTC AGATCTGGTTTCAAAGATGCTGCGAGCTGTTCTGCAGTCTC < 41bp 0.839213953965854 0.441740405315629 0.41054064 0.21039659 prediction 0.678427907931709 Functional Loss - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100190779 chr9:100190780 synonymous SNV . 0 22 hPsi_associated_SNPs_4562 2 0 1 0 1 Ribosome 0.438718703154769 0.438673852066398 0 0 hPsi_site_9979 iPseU_CNN:0;iRNA_PseU:0 9980 chr11 43364103 43364103 1 + A G SKCM 43364102 + 43364082 43364122 41 GCATTGTCATGAGCTTAATATACTTAAATTCTACTACTCAT GCATTGTCATGAGCTTAATATGCTTAAATTCTACTACTCAT < 41bp 0.869997219328964 0.530783600849477 0.34083757 0.22631502 prediction 0.678427236958975 Functional Loss - API5 ENSG00000166181 CDS Human protein_coding chr11:43364102 chr11:43364103 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_4563 0 0 1 1 0 Ribosome 0.438684987403232 0.438649597324345 0 0 hPsi_site_9980 iPseU_CNN:0;iRNA_PseU:0 9981 chr16 31374517 31374517 1 + A G CESC 31374516 + 31374496 31374536 41 GGTGGTGTGATGCTGTTCTCTACGGGGAGCAGGGCCACCCC GGTGGTGTGATGCTGTTCTCTGCGGGGAGCAGGGCCACCCC < 41bp 0.839206767373021 0.425141868869041 0.81556064 0.24615812 prediction 0.678413534746041 Functional Loss - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31374516 chr16:31374517 nonsynonymous SNV 0.277 0 22 hPsi_associated_SNPs_4564 0 0 0 0 1 Nucleus 0.438718643683479 0.43871859343788 0.63112128 0 hPsi_site_9981 iPseU_CNN:0.63112128;iRNA_PseU:0 9982 chr11 6292568 6292568 1 + A G COAD 6292567 + 6292547 6292587 41 CCTTCATTCACTTGCTGAGCTACGCCTCGGCCTGTGTCAAC CCTTCATTCACTTGCTGAGCTGCGCCTCGGCCTGTGTCAAC < 41bp 0.839203744180826 0.431904706742472 0.4204989 0.17211848 prediction 0.678407488361652 Functional Loss - CCKBR ENSG00000110148 CDS Human protein_coding chr11:6292567 chr11:6292568 nonsynonymous SNV 0.971 4 22 hPsi_associated_SNPs_4565 0 0 0 0 0 unknown 0.438693296941211 0.438891865355259 0 0 hPsi_site_9982 iPseU_CNN:0;iRNA_PseU:0 9983 chr3 179051995 179051995 1 + A G COAD 179051994 + 179051974 179052014 41 TGTGGGAAAGGCTTTTCAAGTATGCTAGAATATTGCAAGCA TGTGGGAAAGGCTTTTCAAGTGTGCTAGAATATTGCAAGCA < 41bp 0.867145761701812 0.527984219247231 0.3635378 0.2213468 prediction 0.678323084909162 Functional Loss - ZNF639 ENSG00000121864 CDS Human protein_coding chr3:179051994 chr3:179051995 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_4566 0 0 1 0 0 Nucleus 0.439200526164858 0.438803011523084 0 0 hPsi_site_9983 iPseU_CNN:0;iRNA_PseU:0 9984 chr15 90623058 90623058 1 + A G ESCA 90623057 + 90623037 90623077 41 GATGGCCTACTACAATGTGCTATAGCGCAAGCTGGGCCACC GATGGCCTACTACAATGTGCTGTAGCGCAAGCTGGGCCACC < 41bp 0.839126715024304 0.445552807389477 0.6792716 0.4864821 prediction 0.678253430048608 Functional Loss - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90623057 chr15:90623058 synonymous SNV . 0 22 hPsi_associated_SNPs_4567 0 0 0 0 0 Endoplasmic reticulum 0.438712651670162 0.438742155450215 0.3585432 0 hPsi_site_9984 iPseU_CNN:0.3585432;iRNA_PseU:0 9985 chr4 55592157 55592157 1 + A G STAD 55592156 + 55592136 55592176 41 GCACGGTTGAATGTAAGGCTTACAACGATGTGGGCAAGACT GCACGGTTGAATGTAAGGCTTGCAACGATGTGGGCAAGACT < 41bp 0.839058664637804 0.439915778004269 0.79920197 0.6462347 prediction 0.678117329275609 Functional Loss - KIT ENSG00000157404 CDS Human protein_coding chr4:55592156 chr4:55592157 nonsynonymous SNV 0.974 0 22 hPsi_associated_SNPs_4568 0 0 0 0 2 Endoplasmic reticulum 0.438719133024069 0.438727340383068 0.30593454 0 hPsi_site_9985 iPseU_CNN:0.30593454;iRNA_PseU:0 9986 chr12 75728562 75728562 1 + A G UCEC 75728561 + 75728541 75728581 41 GATCTTGGGTCTGTGTTTGGTAGCCACTACATCTTCCAAAA GATCTTGGGTCTGTGTTTGGTGGCCACTACATCTTCCAAAA < 41bp 0.83903194639686 0.464142771535224 0.5938974 0.27851126 prediction 0.678063892793719 Functional Loss - GLIPR1L1 ENSG00000173401 CDS Human protein_coding chr12:75728561 chr12:75728562 synonymous SNV . 0 22 hPsi_associated_SNPs_4569 0 0 0 0 0 unknown 0.438718592995082 0.438718592996596 0.1877948 0 hPsi_site_9986 iPseU_CNN:0.1877948;iRNA_PseU:0 9987 chr16 31142381 31142381 1 + A G rs2855479 31142380 + 31142360 31142400 41 CTCTCATTCCTGGGCTTCCCTACCCCTCCCCAGCACAGCCT CTCTCATTCCTGGGCTTCCCTGCCCCTCCCCAGCACAGCCT < 41bp 0.885566907583313 0.546543806660558 0.34227622 0.20134848 prediction 0.678046201845511 Functional Loss - KAT8 ENSG00000103510 UTR3 Human protein_coding chr16:31142380 chr16:31142381 . . 0 22 hPsi_associated_SNPs_4570 0 0 1 0 0 Ribosome 0.438716269854606 0.438718625195492 0 0 hPsi_site_9987 iPseU_CNN:0;iRNA_PseU:0 9988 chr5 140554104 140554104 1 + A G PRAD 140554103 + 140554083 140554123 41 ACAACTCGCCCTTCGTGCTGTACCCGCTGCAGAACAGCTCC ACAACTCGCCCTTCGTGCTGTGCCCGCTGCAGAACAGCTCC < 41bp 0.839010110745513 0.445408449180823 0.39379883 0.1431553 prediction 0.678020221491027 Functional Loss - PCDHB7 ENSG00000113212 CDS Human protein_coding chr5:140554103 chr5:140554104 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_4571 0 0 0 0 0 exosome 0.438724520042294 0.438705365839077 0 0 hPsi_site_9988 iPseU_CNN:0;iRNA_PseU:0 9989 chr6 160543347 160543347 1 + A G LUAD 160543346 + 160543326 160543366 41 CCTGCCAGGATGGCTGGGTGTATGACACGCCCGGCTCTTCC CCTGCCAGGATGGCTGGGTGTGTGACACGCCCGGCTCTTCC < 41bp 0.838998246691533 0.442624046405624 0.6680544 0.3122285 prediction 0.677996493383067 Functional Loss - SLC22A1 ENSG00000175003 CDS Human protein_coding chr6:160543346 chr6:160543347 nonsynonymous SNV 0.083 4 22 hPsi_associated_SNPs_4572 0 0 0 0 1 nucleolus 0.438718593351336 0.438718599212855 0.3361088 0 hPsi_site_9989 iPseU_CNN:0.3361088;iRNA_PseU:0 9990 chr16 22157636 22157636 1 + A G rs187665722 22157635 + 22157615 22157655 41 TGGAGAAGGTGTTAAGGCGCTATGTCCAGAGGCTGCAGTGG TGGAGAAGGTGTTAAGGCGCTGTGTCCAGAGGCTGCAGTGG < 41bp 0.838949734981522 0.42842702877975 0.5281986 0.33743602 prediction 0.677899469963045 Functional Loss - VWA3A ENSG00000175267 CDS Human protein_coding chr16:22157635 chr16:22157636 nonsynonymous SNV 0.932 4 22 hPsi_associated_SNPs_4573 0 0 1 0 2 Endoplasmic reticulum 0.438848214311613 0.438894246228816 0.0563971999999999 0 hPsi_site_9990 iPseU_CNN:0.0563971999999999;iRNA_PseU:0 9991 chr7 130144843 130144843 1 + A G LUSC 130144842 + 130144822 130144862 41 CATTAGCCACTATCCACAGCTAGAGGATCCCATGGGCTTCT CATTAGCCACTATCCACAGCTGGAGGATCCCATGGGCTTCT < 41bp 0.885465882999942 0.546522799146006 0.3554126 0.28350765 prediction 0.677886167707871 Functional Loss - MEST ENSG00000106484 CDS Human protein_coding chr7:130144842 chr7:130144843 stoploss 1.000 0 22 hPsi_associated_SNPs_4574 0 0 0 0 1 Ribosome 0.438723884553667 0.438718546863982 0 0 hPsi_site_9991 iPseU_CNN:0;iRNA_PseU:0 9992 chr18 28986155 28986155 1 + A G GBM 28986154 + 28986134 28986174 41 ATTGGCACAAATGGTGCAGTTATATGCCTGTGATTGCGATG ATTGGCACAAATGGTGCAGTTGTATGCCTGTGATTGCGATG < 41bp 0.890526080107012 0.551606982108175 0.6651653 0.37462276 prediction 0.677838195997675 Functional Loss - DSG4 ENSG00000175065 CDS Human protein_coding chr18:28986154 chr18:28986155 synonymous SNV . 0 22 hPsi_associated_SNPs_4575 0 0 0 0 0 exosome 0.448472294161057 0.443592402819183 0.3303306 0 hPsi_site_9992 iPseU_CNN:0.3303306;iRNA_PseU:0 9993 chr7 107350585 107350585 1 + A G LUAD 107350584 + 107350564 107350604 41 TTTTTGACGGTCCATGATGCTATACTCTATCTACAGAACCA TTTTTGACGGTCCATGATGCTGTACTCTATCTACAGAACCA < 41bp 0.838891008391131 0.439090118255606 0.6027856 0.30863476 prediction 0.677782016782261 Functional Loss - SLC26A4 ENSG00000091137 CDS Human protein_coding chr7:107350584 chr7:107350585 nonsynonymous SNV 0.899 1 22 hPsi_associated_SNPs_4576 0 0 0 0 2 Nucleus 0.427198341058075 0.423543852092964 0.2055712 0 hPsi_site_9993 iPseU_CNN:0.2055712;iRNA_PseU:0 9994 chr7 150773114 150773114 1 + T C PRAD 150773115 - 150773095 150773135 41 CAGGGCCGTGAACAGGTGCATACGGAGGGTCCGGACCTGGG CAGGGCCGTGAACAGGTGCATGCGGAGGGTCCGGACCTGGG < 41bp 0.838878722571613 0.45173032642326 0.49410963 0.30956897 prediction 0.677757445143225 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773115 chr7:150773114 synonymous SNV . 0 22 hPsi_associated_SNPs_4577 0 0 0 0 1 Ribosome 0.438718592968315 0.438718631036695 0 0 hPsi_site_9994 iPseU_CNN:0;iRNA_PseU:0 9995 chr17 18010553 18010553 1 + A G STAD 18010552 + 18010532 18010572 41 TCATCCAGATCGTGAAGAAGTAACGGCGCCTGCCGGGCCTC TCATCCAGATCGTGAAGAAGTGACGGCGCCTGCCGGGCCTC < 41bp 0.885237048778821 0.546361712657108 0.5862156 0.28455317 prediction 0.677750672243425 Functional Loss - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18010552 chr17:18010553 synonymous SNV . 0 22 hPsi_associated_SNPs_4578 0 0 1 0 1 Cytosol 0.438719103734579 0.438716873449706 0.1724312 0 hPsi_site_9995 iPseU_CNN:0.1724312;iRNA_PseU:0 9996 chr7 143048780 143048780 1 + A G UCEC 143048779 + 143048759 143048799 41 ACGACTTCAACTCGAAAGAGTACCGGGGCACCTCCATCTTC ACGACTTCAACTCGAAAGAGTGCCGGGGCACCTCCATCTTC < 41bp 0.838854252441429 0.442493628498408 0.687628 0.29880744 prediction 0.677708504882858 Functional Loss - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143048779 chr7:143048780 nonsynonymous SNV 0.028 1 22 hPsi_associated_SNPs_4579 0 0 0 0 1 exosome 0.438723472376562 0.43871859307515 0.375256 0 hPsi_site_9996 iPseU_CNN:0.375256;iRNA_PseU:0 9997 chr3 98001798 98001798 1 + A G COAD 98001797 + 98001777 98001817 41 GAGTTTGTTCTCACAGGACTTACATATCAGCCAGAGTGGAA GAGTTTGTTCTCACAGGACTTGCATATCAGCCAGAGTGGAA < 41bp 0.859743837075146 0.520901958448367 0.65053236 0.28707683 prediction 0.677683757253558 Functional Loss - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98001797 chr3:98001798 nonsynonymous SNV 0.215 1 22 hPsi_associated_SNPs_4580 0 0 0 0 0 unknown 0.438714337993623 0.438820989900152 0.30106472 0 hPsi_site_9997 iPseU_CNN:0.30106472;iRNA_PseU:0 9998 chr20 37659397 37659397 1 + A C PRAD 37659396 + 37659376 37659416 41 TACACCCTGCGTCAGTCCTCTATGCAGAGAAGCCGCCTCGC TACACCCTGCGTCAGTCCTCTCTGCAGAGAAGCCGCCTCGC < 41bp 0.838793804611 0.466159283294385 0.6625092 0.24648494 prediction 0.677587609221999 Functional Loss - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37659396 chr20:37659397 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_4581 0 0 1 0 2 Endoplasmic reticulum 0.438718585490402 0.438715829462091 0.3250184 0 hPsi_site_9998 iPseU_CNN:0.3250184;iRNA_PseU:0 9999 chr9 4841318 4841318 1 + A G PRAD 4841317 + 4841297 4841337 41 ACAAGTTCATACCTGATATCTATATTTACACAGATCACATG ACAAGTTCATACCTGATATCTGTATTTACACAGATCACATG < 41bp 0.892441978168731 0.553654327805978 0.21933112 0.19586799 prediction 0.677575300725507 Functional Loss - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4841317 chr9:4841318 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4582 0 0 1 0 2 Cytosol 0.439507032291628 0.437943774672165 0 0 hPsi_site_9999 iPseU_CNN:0;iRNA_PseU:0 10000 chr8 39840234 39840234 1 + A G rs4736794 39840233 + 39840213 39840253 41 AGGAACTTGGGGCTCCCTCCTATCCTGGTCCACTCAGACTT AGGAACTTGGGGCTCCCTCCTGTCCTGGTCCACTCAGACTT < 41bp 0.838774870571805 0.438536050681056 0.34561902 0.22076434 prediction 0.67754974114361 Functional Loss - IDO2 ENSG00000188676 CDS Human protein_coding chr8:39840233 chr8:39840234 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4583 0 0 0 1 2 exosome 0.438717994447976 0.438716362696037 0 0 hPsi_site_10000 iPseU_CNN:0;iRNA_PseU:0 10001 chr7 130007781 130007781 1 + A G BLCA 130007780 + 130007760 130007800 41 AGGATGCGGTGGAGGCCTTGTATAAGGTCCATGGGATCGAG AGGATGCGGTGGAGGCCTTGTGTAAGGTCCATGGGATCGAG < 41bp 0.838766816070748 0.441812149161403 0.8539101 0.7534427 prediction 0.677533632141495 Functional Loss - CPA5 ENSG00000158525 CDS Human protein_coding chr7:130007780 chr7:130007781 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4584 0 0 0 0 2 exosome 0.438716998948475 0.43871964590845 0.2009348 0 hPsi_site_10001 iPseU_CNN:0.2009348;iRNA_PseU:0 10002 chr22 39883576 39883576 1 + A G LGG 39883575 + 39883555 39883595 41 ACCTGCTGCGTACCCCACTCTACTCCCACTCGCCCCTGCTG ACCTGCTGCGTACCCCACTCTGCTCCCACTCGCCCCTGCTG < 41bp 0.838764464042917 0.442531521716117 0.8630952 0.38916346 prediction 0.677528928085834 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883575 chr22:39883576 nonsynonymous SNV 0.230 2 22 hPsi_associated_SNPs_4585 0 0 1 0 0 Endoplasmic reticulum 0.434631287396883 0.435051800053821 0.7261904 0 hPsi_site_10002 iPseU_CNN:0.7261904;iRNA_PseU:0 10003 chr14 45370099 45370099 1 + A G UCEC 45370098 + 45370078 45370118 41 TGTCTACCATTCAAGAGAGTTACTGTTCCAACTGGCGATGC TGTCTACCATTCAAGAGAGTTGCTGTTCCAACTGGCGATGC < 41bp 0.838760128989675 0.467923662504997 0.706741 0.34094146 prediction 0.67752025797935 Functional Loss - C14orf28 ENSG00000179476 CDS Human protein_coding chr14:45370098 chr14:45370099 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4586 0 0 0 0 1 cytosol 0.438649814466329 0.438706566387576 0.413482 0 hPsi_site_10003 iPseU_CNN:0.413482;iRNA_PseU:0 10004 chr22 50277770 50277770 1 + A G COAD 50277769 + 50277749 50277789 41 AAAAACGAGAAAGACTTGAGTACCAGTTGTCTCATGAGGCA AAAAACGAGAAAGACTTGAGTGCCAGTTGTCTCATGAGGCA < 41bp 0.838741934165553 0.466121002606722 0.2996033 0.19401705 prediction 0.677483868331105 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50277769 chr22:50277770 nonsynonymous SNV 0.294 4 22 hPsi_associated_SNPs_4587 0 0 1 0 0 chromatin 0.438055384319433 0.437781107461225 0 0 hPsi_site_10004 iPseU_CNN:0;iRNA_PseU:0 10005 chr15 90126180 90126180 1 + A G rs139493471 90126179 + 90126159 90126199 41 TCCACGAATGGAAGGAATGTTATTTCTCCCTGTTGAAGGTA TCCACGAATGGAAGGAATGTTGTTTCTCCCTGTTGAAGGTA < 41bp 0.838722471921058 0.449550943495539 0.2728151 0.19789937 prediction 0.677444943842116 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90126179 chr15:90126180 synonymous SNV . 0 22 hPsi_associated_SNPs_4588 0 0 1 0 1 chromatin 0.438718592957713 0.438718583764863 0 0 hPsi_site_10005 iPseU_CNN:0;iRNA_PseU:0 10006 chr2 85617517 85617517 1 + A C LIHC 85617516 + 85617496 85617536 41 CACTTTCTCAAATTCCAGCTTACCAAAATCTCCATCACCCA CACTTTCTCAAATTCCAGCTTCCCAAAATCTCCATCACCCA < 41bp 0.843079216974779 0.504383538881403 0.6773304 0.3551215 prediction 0.677391356186753 Functional Loss - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85617516 chr2:85617517 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_4589 0 0 0 0 0 Cytosol 0.438718539074943 0.438718592996006 0.3546608 0 hPsi_site_10006 iPseU_CNN:0.3546608;iRNA_PseU:0 10007 chr16 24909365 24909365 1 + A G COAD 24909364 + 24909344 24909384 41 GAGGTGCTCTGATGGCTGCATACCTGAAGGTGCTGCCCCTC GAGGTGCTCTGATGGCTGCATGCCTGAAGGTGCTGCCCCTC < 41bp 0.838690897578015 0.423738132790093 0.4204313 0.21181229 prediction 0.677381795156029 Functional Loss - SLC5A11 ENSG00000158865 CDS Human protein_coding chr16:24909364 chr16:24909365 nonsynonymous SNV 0.959 5 22 hPsi_associated_SNPs_4590 0 0 0 0 2 exosome 0.438748694086458 0.438733804645739 0 0 hPsi_site_10007 iPseU_CNN:0;iRNA_PseU:0 10008 chr14 57747008 57747008 1 + A G STAD 57747007 + 57746987 57747027 41 TATTCTAGTTCACCCTTGTGTAACTTCTCTTGACTCTGCAA TATTCTAGTTCACCCTTGTGTGACTTCTCTTGACTCTGCAA < 41bp 0.838668831902738 0.440423595582927 0.39135504 0.30770615 prediction 0.677337663805477 Functional Loss - AP5M1 ENSG00000053770 CDS Human protein_coding chr14:57747007 chr14:57747008 synonymous SNV . 0 22 hPsi_associated_SNPs_4591 0 0 1 0 0 Cytosol 0.438718552519907 0.438716620806013 0 0 hPsi_site_10008 iPseU_CNN:0;iRNA_PseU:0 10009 chr2 113763655 113763655 1 + A G TGCT 113763654 + 113763634 113763674 41 GCAGTCCCGAGGAAGGACCGTATGTCTCCAGGTGAGTAGCC GCAGTCCCGAGGAAGGACCGTGTGTCTCCAGGTGAGTAGCC < 41bp 0.838655209756683 0.43787943737233 0.5043784 0.2711597 prediction 0.677310419513367 Functional Loss - IL36A ENSG00000136694 CDS Human protein_coding chr2:113763654 chr2:113763655 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4592 0 0 0 0 1 exosome 0.438718509922499 0.438717077968872 0.00875680000000001 0 hPsi_site_10009 iPseU_CNN:0.00875680000000001;iRNA_PseU:0 10010 chr17 46051781 46051781 1 + A G UCEC 46051780 + 46051760 46051800 41 ACTCAGGATTGGCAGGAGATTATAGCTCTGTATGAGAAGGA ACTCAGGATTGGCAGGAGATTGTAGCTCTGTATGAGAAGGA < 41bp 0.881737385485891 0.543086207505328 0.5903756 0.31242615 prediction 0.677302355961126 Functional Loss - CDK5RAP3 ENSG00000108465 CDS Human protein_coding chr17:46051780 chr17:46051781 nonsynonymous SNV 0.043 0 22 hPsi_associated_SNPs_4593 0 0 1 0 2 chromatin 0.438715805704295 0.437905000228396 0.1807512 0 hPsi_site_10010 iPseU_CNN:0.1807512;iRNA_PseU:0 10011 chr16 3367678 3367678 1 + A G UCEC 3367677 + 3367657 3367697 41 AGTCAAAATACAAATTTACATACACACCAAAGAACTCATAC AGTCAAAATACAAATTTACATGCACACCAAAGAACTCATAC < 41bp 0.872534102983701 0.533898631606996 0.71090895 0.26947725 prediction 0.677270942753409 Functional Loss - ZNF75A ENSG00000162086 CDS Human protein_coding chr16:3367677 chr16:3367678 nonsynonymous SNV 0.880 1 22 hPsi_associated_SNPs_4594 0 0 1 0 0 Cytosol 0.438565586229188 0.438898190177653 0.4218179 0 hPsi_site_10011 iPseU_CNN:0.4218179;iRNA_PseU:0 10012 chr11 43591680 43591680 1 + A G UCEC 43591679 + 43591659 43591699 41 ACTTTCTGCTAAAATGAAGTTACAAGACACTTTTCCAGAGT ACTTTCTGCTAAAATGAAGTTGCAAGACACTTTTCCAGAGT < 41bp 0.840439807742143 0.501808740030378 0.8168143 0.48021445 prediction 0.67726213542353 Functional Loss - MIR670HG ENSG00000235661 ncRNA_exonic Human lincRNA chr11:43591679 chr11:43591680 . . 0 22 hPsi_associated_SNPs_4595 0 0 0 0 0 unknown 0.438664446202707 0.438405586594236 0.6336286 0 hPsi_site_10012 iPseU_CNN:0.6336286;iRNA_PseU:0 10013 chr12 104336907 104336907 1 + A G UCEC 104336906 + 104336886 104336926 41 AAAAGGGCTATGAAGTTATTTACCTCACAGAACCTGTGGAT AAAAGGGCTATGAAGTTATTTGCCTCACAGAACCTGTGGAT < 41bp 0.890600779883224 0.551987490920481 0.74234223 0.22554463 prediction 0.677226577925485 Functional Loss - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336906 chr12:104336907 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4596 0 0 1 0 1 Nucleus 0.438716698635575 0.438719269063502 0.48468446 0 hPsi_site_10013 iPseU_CNN:0.48468446;iRNA_PseU:0 10014 chr12 110785679 110785679 1 + A G rs375354343 110785678 + 110785658 110785698 41 ATAACTGTATGTCACTAACTTATAAGCCGCCTCCATGGCAG ATAACTGTATGTCACTAACTTGTAAGCCGCCTCCATGGCAG < 41bp 0.838595294282633 0.468636618417597 0.33260667 0.2735499 prediction 0.677190588565266 Functional Loss - ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110785678 chr12:110785679 . . 0 22 hPsi_associated_SNPs_4597 0 0 1 0 0 Nucleus 0.438718485444579 0.438718474866638 0 0 hPsi_site_10014 iPseU_CNN:0;iRNA_PseU:0 10015 chr2 148680646 148680646 1 + A G rs181901595 148680645 + 148680625 148680665 41 GTATGCCATGGGATTAGTCCTATGGGAACTGGCTTCTCGCT GTATGCCATGGGATTAGTCCTGTGGGAACTGGCTTCTCGCT < 41bp 0.838590682380953 0.443852613508309 0.20711371 0.20026842 prediction 0.677181364761907 Functional Loss - ACVR2A ENSG00000121989 CDS Human protein_coding chr2:148680645 chr2:148680646 synonymous SNV . 0 22 hPsi_associated_SNPs_4598 0 0 0 0 1 Ribosome 0.438742448756293 0.438791194829563 0 0 hPsi_site_10015 iPseU_CNN:0;iRNA_PseU:0 10016 chr1 248403160 248403160 1 + A G COAD 248403159 + 248403139 248403179 41 GGTACTGAAGAAAAGAAAGTTAATATGACCTTATCAAAATC GGTACTGAAGAAAAGAAAGTTGATATGACCTTATCAAAATC < 41bp 0.841233274874318 0.502668880902997 0.35247618 0.3657052 prediction 0.677128787942643 Functional Loss - OR2M4 ENSG00000171180 CDS Human protein_coding chr1:248403159 chr1:248403160 synonymous SNV . 0 22 hPsi_associated_SNPs_4599 0 0 0 0 0 exosome 0.438718599723966 0.438718485595767 0 0 hPsi_site_10016 iPseU_CNN:0;iRNA_PseU:0 10017 chr5 7892984 7892984 1 + A G rs201376855 7892983 + 7892963 7893003 41 TTCAGTTCTTCAGCCAAACATACATGCATCCCATGAAGACA TTCAGTTCTTCAGCCAAACATGCATGCATCCCATGAAGACA < 41bp 0.838545380128847 0.445022889847544 0.6416532 0.30087388 prediction 0.677090760257694 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7892983 chr5:7892984 nonsynonymous SNV 0.012 0 22 hPsi_associated_SNPs_4600 0 0 1 0 1 Nucleus 0.440338050236554 0.438993717137362 0.2833064 0 hPsi_site_10017 iPseU_CNN:0.2833064;iRNA_PseU:0 10018 chrX 23398111 23398111 1 + A G UCEC 23398110 + 23398090 23398130 41 GCAAAGTCAAAATGTACCCTTACACGTCCTCCTCACTGAGG GCAAAGTCAAAATGTACCCTTGCACGTCCTCCTCACTGAGG < 41bp 0.838530767148688 0.429597841996047 0.81226444 0.26049563 prediction 0.677061534297375 Functional Loss - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23398110 chrX:23398111 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_4601 0 0 0 0 0 exosome 0.438728636794758 0.438718749603887 0.62452888 0 hPsi_site_10018 iPseU_CNN:0.62452888;iRNA_PseU:0 10019 chr9 125377375 125377375 1 + A G rs150614521 125377374 + 125377354 125377394 41 TCATCCTGGCTGTGATGGCCTATGACAGGTACATTGCCATC TCATCCTGGCTGTGATGGCCTGTGACAGGTACATTGCCATC < 41bp 0.838529642080943 0.447381542070268 0.27628767 0.21565986 prediction 0.677059284161887 Functional Loss - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377374 chr9:125377375 nonsynonymous SNV 0.087 4 22 hPsi_associated_SNPs_4602 0 0 0 0 0 unknown 0.438675693271548 0.438699167602248 0 0 hPsi_site_10019 iPseU_CNN:0;iRNA_PseU:0 10020 chr3 111732320 111732320 1 + A C HNSC 111732319 + 111732299 111732339 41 TCGCCAGGGACAGAACGTAATAGGCCTGCAGATGGGCAGCA TCGCCAGGGACAGAACGTAATCGGCCTGCAGATGGGCAGCA < 41bp 0.838509546608838 0.493473340081731 0.3417589 0.25905758 prediction 0.677019093217676 Functional Loss - TAGLN3 ENSG00000144834 CDS Human protein_coding chr3:111732319 chr3:111732320 synonymous SNV . 0 22 hPsi_associated_SNPs_4603 0 0 0 0 1 Endoplasmic reticulum 0.438718886114425 0.438443048134636 0 0 hPsi_site_10020 iPseU_CNN:0;iRNA_PseU:0 10021 chr4 156135999 156135999 1 + A G STAD 156135998 + 156135978 156136018 41 AGGTCCTGGACCTGAAGGAGTACAAACTCATCTTCACAGTG AGGTCCTGGACCTGAAGGAGTGCAAACTCATCTTCACAGTG < 41bp 0.891639678678006 0.553134016323275 0.47624338 0.3832303 prediction 0.677011324709463 Functional Loss - NPY2R ENSG00000185149 CDS Human protein_coding chr4:156135998 chr4:156135999 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4604 0 0 0 0 0 unknown 0.438718593058491 0.438718593028291 0 0 hPsi_site_10021 iPseU_CNN:0;iRNA_PseU:0 10022 chrX 135638623 135638623 1 + A G SKCM 135638622 + 135638602 135638642 41 TCCTTTAGCTCTTTCAGAGTTAGAGACACCTGGGAAATACT TCCTTTAGCTCTTTCAGAGTTGGAGACACCTGGGAAATACT < 41bp 0.868986408428647 0.530485004393688 0.7751823 0.5636276 prediction 0.677002808069918 Functional Loss - VGLL1 ENSG00000102243 CDS Human protein_coding chrX:135638622 chrX:135638623 synonymous SNV . 0 22 hPsi_associated_SNPs_4605 0 0 0 0 1 unknown 0.438759769093276 0.438718771213559 0.4231094 0 hPsi_site_10022 iPseU_CNN:0.4231094;iRNA_PseU:0 10023 chr19 15791074 15791074 1 + A G rs114254919 15791073 + 15791053 15791093 41 GCTGCCATTGCACCCAAGGATAATCTCTTCATCAGGTTCCT GCTGCCATTGCACCCAAGGATGATCTCTTCATCAGGTTCCT < 41bp 0.838491434480731 0.439680730395401 0.63658845 0.33276254 prediction 0.676982868961462 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15791073 chr19:15791074 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4606 0 0 1 0 2 exosome 0.438716440129676 0.439209170560164 0.2731769 0 hPsi_site_10023 iPseU_CNN:0.2731769;iRNA_PseU:0 10024 chr1 15956926 15956926 1 + A G BLCA 15956925 + 15956905 15956945 41 CCACTCATCTCCTGGAGAAATAACTTCATCTCCTCAGGGCT CCACTCATCTCCTGGAGAAATGACTTCATCTCCTCAGGGCT < 41bp 0.838480757375595 0.426756448663606 0.30142123 0.23694059 prediction 0.67696151475119 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15956925 chr1:15956926 nonsynonymous SNV 0.730 0 22 hPsi_associated_SNPs_4607 0 0 1 0 0 Ribosome 0.43870811311309 0.438718592994681 0 0 hPsi_site_10024 iPseU_CNN:0;iRNA_PseU:0 10025 chr1 119965140 119965140 1 + A G LUAD 119965139 + 119965119 119965159 41 AGGCTCAGCGAGATCTGGCGTATAAGCCACTCTACAGCTGG AGGCTCAGCGAGATCTGGCGTGTAAGCCACTCTACAGCTGG < 41bp 0.876823526894316 0.538350313404154 0.6102484 0.33259755 prediction 0.676946426980324 Functional Loss - HSD3B2 ENSG00000203859 CDS Human protein_coding chr1:119965139 chr1:119965140 nonsynonymous SNV 0.065 5 22 hPsi_associated_SNPs_4608 0 0 0 0 0 unknown 0.438718591382745 0.438727311983404 0.2204968 0 hPsi_site_10025 iPseU_CNN:0.2204968;iRNA_PseU:0 10026 chr1 148594462 148594462 1 + A G STAD 148594461 + 148594441 148594481 41 AGGACTCACTGGATAGATGTTATTCGACTCCGTCAATGTAC AGGACTCACTGGATAGATGTTGTTCGACTCCGTCAATGTAC < 41bp 0.885950384200976 0.54750644989255 0.6552136 0.40942115 prediction 0.676887868616852 Functional Loss - NBPF15 ENSG00000243452 CDS Human other chr1:148594461 chr1:148594462 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4609 0 0 1 0 1 Cytosol 0.438867758252648 0.438412969711553 0.3104272 0 hPsi_site_10026 iPseU_CNN:0.3104272;iRNA_PseU:0 10027 chr20 2377243 2377243 1 + A G HNSC 2377242 + 2377222 2377262 41 CCGAGGCGTGGAGAAGCACATACGAGCCCAGGGCTGGAACT CCGAGGCGTGGAGAAGCACATGCGAGCCCAGGGCTGGAACT < 41bp 0.838417402169838 0.435534030378904 0.682921 0.32905936 prediction 0.676834804339676 Functional Loss - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2377242 chr20:2377243 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_4610 0 0 0 0 2 exosome 0.438718177040126 0.438718604944159 0.365842 0 hPsi_site_10027 iPseU_CNN:0.365842;iRNA_PseU:0 10028 chr2 187370543 187370543 1 + A G BRCA 187370542 + 187370522 187370562 41 AGGAAGCAGATGATACCCGCTACACCCAGGGAACAGGTGGT AGGAAGCAGATGATACCCGCTGCACCCAGGGAACAGGTGGT < 41bp 0.892215594947336 0.553807379891316 0.6270372 0.20382428 prediction 0.676816430112039 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187370542 chr2:187370543 nonsynonymous SNV 0.899 2 22 hPsi_associated_SNPs_4611 0 0 1 0 2 Ribosome 0.438878974379874 0.439093839881843 0.2540744 0 hPsi_site_10028 iPseU_CNN:0.2540744;iRNA_PseU:0 10029 chr18 55335659 55335659 1 + A G UCEC 55335658 + 55335638 55335678 41 TGCTTCCCTGCACAATGAATTACCCTTTTTGTCTCCAGTAA TGCTTCCCTGCACAATGAATTGCCCTTTTTGTCTCCAGTAA < 41bp 0.868540416891711 0.530139217843888 0.34383073 0.3102676 prediction 0.676802398095647 Functional Loss - ATP8B1 ENSG00000267040;ENSG00000081923 ncRNA_exonic;splicing Human other chr18:55335658 chr18:55335659 . 0.955 0 22 hPsi_associated_SNPs_4612 0 0 1 0 0 Ribosome 0.43871725612148 0.438686068772932 0 0 hPsi_site_10029 iPseU_CNN:0;iRNA_PseU:0 10030 chr11 4661048 4661048 1 + A G LIHC 4661047 + 4661027 4661067 41 AAGCCCCAGCTCTTGGTCCCTATCATAGCCACTTCAAATGG AAGCCCCAGCTCTTGGTCCCTGTCATAGCCACTTCAAATGG < 41bp 0.838370089476253 0.473327651837711 0.5836226 0.29048738 prediction 0.676740178952506 Functional Loss - OR51D1 ENSG00000197428 CDS Human protein_coding chr11:4661047 chr11:4661048 nonsynonymous SNV 0.121 0 22 hPsi_associated_SNPs_4613 0 0 0 0 0 unknown 0.438718610488989 0.438718609158448 0.1672452 0 hPsi_site_10030 iPseU_CNN:0.1672452;iRNA_PseU:0 10031 chr10 102676591 102676591 1 + A G rs114300819 102676590 + 102676570 102676610 41 TAGCCAAAGGAACAAATATCTATGTTCCTTCTTCATATCAC TAGCCAAAGGAACAAATATCTGTGTTCCTTCTTCATATCAC < 41bp 0.838363584955913 0.442138377111699 0.3838057 0.30246872 prediction 0.676727169911825 Functional Loss - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102676590 chr10:102676591 nonsynonymous SNV 0.431 2 22 hPsi_associated_SNPs_4614 0 0 1 0 0 Nucleus 0.438724790016231 0.438721030381765 0 0 hPsi_site_10031 iPseU_CNN:0;iRNA_PseU:0 10032 chrX 11133059 11133059 1 + A C COAD 11133058 + 11133038 11133078 41 GAGTACGTGGAGTGTCCCATTAGGGGCACTGCGGCTGAGAA GAGTACGTGGAGTGTCCCATTCGGGGCACTGCGGCTGAGAA < 41bp 0.86150731646787 0.523185358648818 0.36702508 0.23043215 prediction 0.676643915638103 Functional Loss - HCCS ENSG00000004961 CDS Human protein_coding chrX:11133058 chrX:11133059 synonymous SNV . 0 22 hPsi_associated_SNPs_4615 0 0 1 0 1 Cytosol 0.438697832365301 0.439311231170745 0 0 hPsi_site_10032 iPseU_CNN:0;iRNA_PseU:0 10033 chr11 48328426 48328426 1 + A G PAAD 48328425 + 48328405 48328445 41 ATCCTTATCATTTCCTATGTTATCATCTTACTGAACCTAAG ATCCTTATCATTTCCTATGTTGTCATCTTACTGAACCTAAG < 41bp 0.87199600564959 0.533696989485236 0.34880167 0.24628505 prediction 0.676598032328708 Functional Loss - OR4S1 ENSG00000176555 CDS Human protein_coding chr11:48328425 chr11:48328426 nonsynonymous SNV 0.029 0 22 hPsi_associated_SNPs_4616 0 0 0 0 0 unknown 0.438718590775844 0.438718585506231 0 0 hPsi_site_10033 iPseU_CNN:0;iRNA_PseU:0 Breast-ovarian cancer, familial 2 Breast-ovarian cancer, familial 2 10034 chr17 27028020 27028020 1 + A G UCEC 27028019 + 27027999 27028039 41 TAATGACCCCTAGCTACTCCTACACGACCCCAAGCCAGCCC TAATGACCCCTAGCTACTCCTGCACGACCCCAAGCCAGCCC < 41bp 0.838278597334414 0.433341811197585 0.42399523 0.17101273 prediction 0.676557194668828 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27028019 chr17:27028020 nonsynonymous SNV 0.971 2 22 hPsi_associated_SNPs_4617 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592995102 0 0 hPsi_site_10034 iPseU_CNN:0;iRNA_PseU:0 10035 chr2 69002491 69002491 1 + A G PRAD 69002490 + 69002470 69002510 41 TGAAGAACTGGCAGCAGAGGTACTTTGTGCTGAGGGCGCAG TGAAGAACTGGCAGCAGAGGTGCTTTGTGCTGAGGGCGCAG < 41bp 0.838277066332389 0.429729721481174 0.4348272 0.2980612 prediction 0.676554132664777 Functional Loss - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69002490 chr2:69002491 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4618 0 0 0 0 1 chromatin 0.438744324550158 0.438725807377718 0 0 hPsi_site_10035 iPseU_CNN:0;iRNA_PseU:0 10036 chr18 77246652 77246652 1 + A G COAD 77246651 + 77246631 77246671 41 GTGAGTGCGCCTCCAAGCAGTAGCTGCCCCCCTGGTCTCGA GTGAGTGCGCCTCCAAGCAGTGGCTGCCCCCCTGGTCTCGA < 41bp 0.838252685826816 0.44535734705358 0.6231342 0.29880133 prediction 0.676505371653633 Functional Loss - NFATC1 ENSG00000131196 CDS Human protein_coding chr18:77246651 chr18:77246652 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_4619 0 0 0 0 0 Cytosol 0.438718593012716 0.438718591451907 0.2462684 0 hPsi_site_10036 iPseU_CNN:0.2462684;iRNA_PseU:0 10037 chr14 52735128 52735128 1 + A G STAD 52735127 + 52735107 52735147 41 GCTCGCTGTCGGTGCTGGGGTACTCTGTGCTCTACTCCAGC GCTCGCTGTCGGTGCTGGGGTGCTCTGTGCTCTACTCCAGC < 41bp 0.886595567290373 0.548378691699331 0.8984527 0.40401375 prediction 0.676433751182084 Functional Loss - PTGDR ENSG00000168229 CDS Human protein_coding chr14:52735127 chr14:52735128 nonsynonymous SNV 0.968 3 22 hPsi_associated_SNPs_4620 0 0 0 0 0 exosome 0.438606632524148 0.438652163822652 0.7969054 0 hPsi_site_10037 iPseU_CNN:0.7969054;iRNA_PseU:0 10038 chr6 27776335 27776335 1 + A G CESC 27776334 + 27776314 27776354 41 GCCCAACATCCAGGCCGTGCTACTGCCCAAGAAGACCGAGA GCCCAACATCCAGGCCGTGCTGCTGCCCAAGAAGACCGAGA < 41bp 0.838189744358585 0.459945155589198 0.45220557 0.22953254 prediction 0.676379488717171 Functional Loss - HIST1H2AI ENSG00000196747 CDS Human protein_coding chr6:27776334 chr6:27776335 synonymous SNV . 0 22 hPsi_associated_SNPs_4621 0 0 1 0 0 Ribosome 0.43871807143943 0.438719519695329 0 0 hPsi_site_10038 iPseU_CNN:0;iRNA_PseU:0 10039 chr4 57367923 57367923 1 + A G UCEC 57367922 + 57367902 57367942 41 GCTGCAACAGTATCTGCCTCTACAAGTAACATCATACCCCC GCTGCAACAGTATCTGCCTCTGCAAGTAACATCATACCCCC < 41bp 0.838188506454693 0.455973274687887 0.24689147 0.20045432 prediction 0.676377012909386 Functional Loss - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57367922 chr4:57367923 nonsynonymous SNV 0.929 0 22 hPsi_associated_SNPs_4622 0 0 1 0 1 Cytosol 0.438718524388337 0.438717328851229 0 0 hPsi_site_10039 iPseU_CNN:0;iRNA_PseU:0 10040 chr1 180885464 180885464 1 + A G LGG 180885463 + 180885443 180885483 41 GCCTCCCAGGGTATGGGGAGTACAGCTCCAGGGCCCCTCTG GCCTCCCAGGGTATGGGGAGTGCAGCTCCAGGGCCCCTCTG < 41bp 0.838128377943988 0.43345672435493 0.6994399 0.32587206 prediction 0.676256755887975 Functional Loss - KIAA1614 ENSG00000135835 CDS Human protein_coding chr1:180885463 chr1:180885464 synonymous SNV . 0 22 hPsi_associated_SNPs_4623 0 0 0 0 0 nucleus 0.43871859299259 0.438718592994332 0.3988798 0 hPsi_site_10040 iPseU_CNN:0.3988798;iRNA_PseU:0 10041 chr12 7061250 7061250 1 + A G KICH 7061249 + 7061229 7061269 41 TGACAGAGCTGGTGGAGTACTACACTCAGCAGCAGGGTGTC TGACAGAGCTGGTGGAGTACTGCACTCAGCAGCAGGGTGTC < 41bp 0.896980683605244 0.558880996810853 0.6260246 0.21377158 prediction 0.676199373588781 Functional Loss - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7061249 chr12:7061250 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4624 0 0 0 0 1 chromatin 0.427165475352075 0.421586554010675 0.2520492 0 hPsi_site_10041 iPseU_CNN:0.2520492;iRNA_PseU:0 10042 chr21 38877829 38877829 1 + A G SKCM 38877828 + 38877808 38877848 41 AATACAAGTAATAGTGTATCTACAAGCCCCGCCATGGAGCA AATACAAGTAATAGTGTATCTGCAAGCCCCGCCATGGAGCA < 41bp 0.888691211081958 0.550621858892505 0.68306494 0.2948573 prediction 0.676138704378906 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38877828 chr21:38877829 nonsynonymous SNV 0.757 3 22 hPsi_associated_SNPs_4625 0 0 1 0 1 Cytosol 0.438718592995102 0.4387185929951 0.36612988 0 hPsi_site_10042 iPseU_CNN:0.36612988;iRNA_PseU:0 10043 chr2 61149083 61149083 1 + A G LUSC 61149082 + 61149062 61149102 41 CCCACCCCACGCTCAGGCAATACAAACCCACTGAGTAGTTT CCCACCCCACGCTCAGGCAATGCAAACCCACTGAGTAGTTT < 41bp 0.838058662545588 0.451751135207143 0.55751777 0.38862467 prediction 0.676117325091177 Functional Loss - REL ENSG00000162924 CDS Human protein_coding chr2:61149082 chr2:61149083 nonsynonymous SNV 0.815 0 22 hPsi_associated_SNPs_4626 0 0 0 0 0 Cytosol 0.438718592996378 0.438718592965613 0.11503554 0 hPsi_site_10043 iPseU_CNN:0.11503554;iRNA_PseU:0 10044 chrX 37027428 37027428 1 + A G UCEC 37027427 + 37027407 37027447 41 GGAGCCTCCCAAGTCACGCGTATCTCATCTCCGCCCAGAGC GGAGCCTCCCAAGTCACGCGTGTCTCATCTCCGCCCAGAGC < 41bp 0.8379616665766 0.444511747265527 0.7117857 0.35304692 prediction 0.675923333153199 Functional Loss - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37027427 chrX:37027428 synonymous SNV . 0 22 hPsi_associated_SNPs_4627 0 0 0 0 0 unknown 0.438701833254739 0.43871224757978 0.4235714 0 hPsi_site_10044 iPseU_CNN:0.4235714;iRNA_PseU:0 10045 chr11 55433031 55433031 1 + A G KIRC 55433030 + 55433010 55433050 41 CCATCTGTAAGCCCCTGCACTACACGATCATCATGAGTCCA CCATCTGTAAGCCCCTGCACTGCACGATCATCATGAGTCCA < 41bp 0.877735859778351 0.539806669116931 0.87455565 0.43242365 prediction 0.675858381322841 Functional Loss - OR4C6 ENSG00000181903 CDS Human protein_coding chr11:55433030 chr11:55433031 nonsynonymous SNV 0.798 3 22 hPsi_associated_SNPs_4628 0 0 0 0 0 unknown 0.438208240176948 0.436869670085664 0.7491113 0 hPsi_site_10045 iPseU_CNN:0.7491113;iRNA_PseU:0 10046 chr3 141011151 141011151 1 + A G LGG 141011150 + 141011130 141011170 41 AACGGTCAGCTGCTGAGGGATATCTATCTAAAGAAACACAA AACGGTCAGCTGCTGAGGGATGTCTATCTAAAGAAACACAA < 41bp 0.837893611419304 0.444831311039825 0.6299114 0.4770108 prediction 0.675787222838608 Functional Loss - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:141011150 chr3:141011151 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4629 0 0 0 0 1 Ribosome 0.438718950554363 0.438718062100519 0.2598228 0 hPsi_site_10046 iPseU_CNN:0.2598228;iRNA_PseU:0 10047 chr5 176520703 176520703 1 + A G STAD 176520702 + 176520682 176520722 41 GGGCTGCTTTGGCCAGGTAGTACGTGCAGAGGCCTTTGGCA GGGCTGCTTTGGCCAGGTAGTGCGTGCAGAGGCCTTTGGCA < 41bp 0.90146873152769 0.563596822234823 0.69608516 0.29482338 prediction 0.675743818585735 Functional Loss - FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176520702 chr5:176520703 synonymous SNV . 0 22 hPsi_associated_SNPs_4630 0 0 1 0 2 Endoplasmic reticulum 0.438828090408268 0.438717908440631 0.39217032 0 hPsi_site_10047 iPseU_CNN:0.39217032;iRNA_PseU:0 10048 chr11 123886457 123886457 1 + A G rs138504511 123886456 + 123886436 123886476 41 ACCTCCACACCCCCATGTACTACTTCCTCACCAACCTGTCC ACCTCCACACCCCCATGTACTGCTTCCTCACCAACCTGTCC < 41bp 0.88661263982301 0.548753369803058 0.7732233 0.36803117 prediction 0.675718540039903 Functional Loss - OR10G4 ENSG00000254737 CDS Human protein_coding chr11:123886456 chr11:123886457 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4631 0 0 0 0 0 unknown 0.436991374750368 0.438603086420045 0.5464466 0 hPsi_site_10048 iPseU_CNN:0.5464466;iRNA_PseU:0 10049 chr11 5842390 5842390 1 + A G LAML 5842389 + 5842369 5842409 41 ACACAATATCCCAAACCACATACACATCATCGTGGCCAACC ACACAATATCCCAAACCACATGCACATCATCGTGGCCAACC < 41bp 0.837859199956136 0.466810913427954 0.7796384 0.17207062 prediction 0.675718399912272 Functional Loss - OR52N2 ENSG00000180988 CDS Human protein_coding chr11:5842389 chr11:5842390 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_4632 0 0 0 0 0 unknown 0.439262399216893 0.438720789378033 0.5592768 0 hPsi_site_10049 iPseU_CNN:0.5592768;iRNA_PseU:0 10050 chrX 79281173 79281173 1 + A G CESC 79281172 + 79281152 79281192 41 TGTGCATCATTCCTAGATTCTATGTTCACCCGGACTCACCC TGTGCATCATTCCTAGATTCTGTGTTCACCCGGACTCACCC < 41bp 0.897970170812959 0.560114854665343 0.40032184 0.31575775 prediction 0.675710632295232 Functional Loss - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79281172 chrX:79281173 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_4633 0 0 0 0 1 unknown 0.438549425662695 0.426466448936041 0 0 hPsi_site_10050 iPseU_CNN:0;iRNA_PseU:0 10051 chr1 184041382 184041382 1 + A C LUAD 184041381 + 184041361 184041401 41 GCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACT GCCATAGTGGAGTCTGATTCTCCAATAGTCTATTATAAACT < 41bp 0.840243068096976 0.502395653608535 0.21683553 0.14850286 prediction 0.675694828976883 Functional Loss - TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184041381 chr1:184041382 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4634 0 0 1 3 2 Ribosome 0.438718500113875 0.438718592995094 0 0 hPsi_site_10051 iPseU_CNN:0;iRNA_PseU:0 10052 chr9 66468754 66468754 1 + A G rs564066289 66468753 + 66468733 66468773 41 TGGCTGCTGAGTGTGATGCCTATCTGACCTCTCCATGTTAC TGGCTGCTGAGTGTGATGCCTGTCTGACCTCTCCATGTTAC < 41bp 0.837825359431755 0.471169641173662 0.6435213 0.54495513 prediction 0.675650718863511 Functional Loss - LINC01410 ENSG00000238113 ncRNA_exonic Human lincRNA chr9:66468753 chr9:66468754 . . 0 22 hPsi_associated_SNPs_4635 0 0 0 0 0 unknown 0.442749757130029 0.432833895158079 0.19713234 0 hPsi_site_10052 iPseU_CNN:0.19713234;iRNA_PseU:0 10053 chr2 131520031 131520031 1 + A G UCEC 131520030 + 131520010 131520050 41 GCAGCCGGCGCATGATCGACTACCGCCACTTTGTGCCCCAG GCAGCCGGCGCATGATCGACTGCCGCCACTTTGTGCCCCAG < 41bp 0.837810900713848 0.434371118304104 0.8064905 0.33327252 prediction 0.675621801427695 Functional Loss - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131520030 chr2:131520031 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_4636 0 0 0 0 0 Nucleus 0.438718596337806 0.438718592994814 0.612981 0 hPsi_site_10053 iPseU_CNN:0.612981;iRNA_PseU:0 10054 chr1 109637383 109637383 1 + A G rs17838311 109637382 + 109637362 109637402 41 CATATAATGTCCGGATAAATTACACCCCTCGGTGATAAGAT CATATAATGTCCGGATAAATTGCACCCCTCGGTGATAAGAT < 41bp 0.837805493806059 0.474352689170963 0.26991254 0.17346856 prediction 0.675610987612118 Functional Loss - TMEM167B ENSG00000215717 UTR3 Human protein_coding chr1:109637382 chr1:109637383 . . 0 22 hPsi_associated_SNPs_4637 0 0 1 0 0 Ribosome 0.438720317866664 0.438718663319174 0 0 hPsi_site_10054 iPseU_CNN:0;iRNA_PseU:0 10055 chr1 150469359 150469359 1 + A G COAD 150469358 + 150469338 150469378 41 TGCCACGAGGGACAAGGGTGTATAATGCACTAGTGGCGTTT TGCCACGAGGGACAAGGGTGTGTAATGCACTAGTGGCGTTT < 41bp 0.837796549098404 0.436018466867978 0.69111794 0.31041217 prediction 0.675593098196808 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150469358 chr1:150469359 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4638 0 0 0 1 1 Ribosome 0.440557481324893 0.440972828074105 0.38223588 0 hPsi_site_10055 iPseU_CNN:0.38223588;iRNA_PseU:0 10056 chr5 147693745 147693745 1 + A G UCEC 147693744 + 147693724 147693764 41 TACCAGTTTGTGGTTCTGACTACATCACCTATGGGAATGAA TACCAGTTTGTGGTTCTGACTGCATCACCTATGGGAATGAA < 41bp 0.837777860407177 0.442221852268441 0.49259618 0.27226847 prediction 0.675555720814353 Functional Loss - SPINK7 ENSG00000145879 CDS Human protein_coding chr5:147693744 chr5:147693745 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4639 0 0 0 0 2 unknown 0.438701890381398 0.438709695688018 0 0 hPsi_site_10056 iPseU_CNN:0;iRNA_PseU:0 10057 chr12 69986773 69986773 1 + A C LUSC 69986772 + 69986752 69986792 41 TTAGATATTTGGTTCCCGGGTAAGAGTTGACTCTACAGCAA TTAGATATTTGGTTCCCGGGTCAGAGTTGACTCTACAGCAA < 41bp 0.837777791186791 0.48030696714404 0.50981647 0.28843904 prediction 0.675555582373581 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986772 chr12:69986773 synonymous SNV . 0 22 hPsi_associated_SNPs_4640 0 0 1 0 1 Nucleus 0.438718593883438 0.438718594052205 0.0196329399999999 0 hPsi_site_10057 iPseU_CNN:0.0196329399999999;iRNA_PseU:0 10058 chr5 151173756 151173756 1 + A G LUAD 151173755 + 151173735 151173775 41 AAATTCTATGTTCACAATGATATCTTCAGATACCAAGATGA AAATTCTATGTTCACAATGATGTCTTCAGATACCAAGATGA < 41bp 0.837771352264252 0.461295140621668 0.27101225 0.25031877 prediction 0.675542704528504 Functional Loss - G3BP1 ENSG00000145907 CDS Human protein_coding chr5:151173755 chr5:151173756 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4641 0 0 1 0 1 Cytosol 0.435801338580551 0.438809369360703 0 0 hPsi_site_10058 iPseU_CNN:0;iRNA_PseU:0 10059 chrX 53106765 53106765 1 + A G STAD 53106764 + 53106744 53106784 41 CCTGTGCTGTGCCCCACCGCTACCTGGCCACTGCTGTTTGG CCTGTGCTGTGCCCCACCGCTGCCTGGCCACTGCTGTTTGG < 41bp 0.837770614707584 0.438971608380029 0.67969996 0.3387964 prediction 0.675541229415169 Functional Loss - GPR173 ENSG00000184194 CDS Human protein_coding chrX:53106764 chrX:53106765 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4642 0 0 0 0 0 exosome 0.4387187658866 0.438719465824195 0.35939992 0 hPsi_site_10059 iPseU_CNN:0.35939992;iRNA_PseU:0 10060 chr4 106629993 106629993 1 + A G rs146409698 106629992 + 106629972 106630012 41 TGAATGACGGCCGGCGCGAGTATTTTCCACATAAGGTGGCT TGAATGACGGCCGGCGCGAGTGTTTTCCACATAAGGTGGCT < 41bp 0.837760475509967 0.482606782217582 0.3200743 0.22221512 prediction 0.675520951019933 Functional Loss - GSTCD ENSG00000138780;ENSG00000138785 UTR5 Human other chr4:106629992 chr4:106629993 . . 0 22 hPsi_associated_SNPs_4643 0 0 1 0 0 Ribosome 0.43871859299537 0.438718593033413 0 0 hPsi_site_10060 iPseU_CNN:0;iRNA_PseU:0 10061 chr19 917741 917741 1 + A G LUAD 917740 + 917720 917760 41 TGCGGACCGTGACCAACTTCTACATCGGTGAGTGCGGGCGC TGCGGACCGTGACCAACTTCTGCATCGGTGAGTGCGGGCGC < 41bp 0.837730595281121 0.459756087663223 0.43137842 0.36917382 prediction 0.675461190562241 Functional Loss - KISS1R ENSG00000116014 CDS Human protein_coding chr19:917740 chr19:917741 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_4644 0 0 1 0 1 nucleus 0.438784833326971 0.438740240528967 0 0 hPsi_site_10061 iPseU_CNN:0;iRNA_PseU:0 10062 chr3 141011428 141011428 1 + A G LUAD 141011427 + 141011407 141011447 41 ACAGCCAGCTGGAGAAGACCTACGGGGAGATGGCCAAGATC ACAGCCAGCTGGAGAAGACCTGCGGGGAGATGGCCAAGATC < 41bp 0.83771097259317 0.434662113817167 0.85570717 0.3110748 prediction 0.675421945186339 Functional Loss - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:141011427 chr3:141011428 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_4645 0 0 0 0 0 Ribosome 0.438718592995384 0.438718592995102 0.71141434 0 hPsi_site_10062 iPseU_CNN:0.71141434;iRNA_PseU:0 10063 chr9 140174028 140174028 1 + A G LUSC 140174027 + 140174007 140174047 41 ACCACTTCCACAACGCCATCTACGTGCTCCTCAGTGGCGCG ACCACTTCCACAACGCCATCTGCGTGCTCCTCAGTGGCGCG < 41bp 0.837671162811651 0.451276286573139 0.64714706 0.28117 prediction 0.675342325623302 Functional Loss - TOR4A ENSG00000198113 CDS Human protein_coding chr9:140174027 chr9:140174028 nonsynonymous SNV 0.979 4 22 hPsi_associated_SNPs_4646 0 0 1 0 0 Ribosome 0.435729810201513 0.432704505618871 0.29429412 0 hPsi_site_10063 iPseU_CNN:0.29429412;iRNA_PseU:0 10064 chrX 114425902 114425902 1 + A G UCEC 114425901 + 114425881 114425921 41 GAGGAGGCCGCTACGAGGAGTACCGAGGCCGCTCCCTTGAT GAGGAGGCCGCTACGAGGAGTGCCGAGGCCGCTCCCTTGAT < 41bp 0.873628089491074 0.535958790055358 0.7655134 0.3645695 prediction 0.675338598871433 Functional Loss - RBMXL3 ENSG00000175718 CDS Human protein_coding chrX:114425901 chrX:114425902 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_4647 0 0 0 0 0 exosome 0.438717918696255 0.438718245405153 0.5310268 0 hPsi_site_10064 iPseU_CNN:0.5310268;iRNA_PseU:0 10065 chr6 32007370 32007370 1 + A G rs143240527 32007369 + 32007349 32007389 41 CAAATGTATCCAGGAGGTGTTAAAAACCTGGAGCCACTGGT CAAATGTATCCAGGAGGTGTTGAAAACCTGGAGCCACTGGT < 41bp 0.857697605255267 0.520047635900762 0.7290628 0.5816463 prediction 0.675299938709009 Functional Loss - CYP21A2 ENSG00000231852 CDS Human protein_coding chr6:32007369 chr6:32007370 synonymous SNV . 0 22 hPsi_associated_SNPs_4648 0 0 0 0 1 Cytosol 0.438718557625074 0.438718591011559 0.294833 0 hPsi_site_10065 iPseU_CNN:0.294833;iRNA_PseU:0 10066 chr2 202955593 202955593 1 + A G COAD 202955592 + 202955572 202955612 41 CAGGGCATTCAGCCAAGAGATACCTCCGAGGCCTCCTGCGG CAGGGCATTCAGCCAAGAGATGCCTCCGAGGCCTCCTGCGG < 41bp 0.888341486478917 0.550698503336883 0.72458637 0.34470725 prediction 0.675285966284066 Functional Loss - KIAA2012 ENSG00000182329 CDS Human protein_coding chr2:202955592 chr2:202955593 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4649 0 0 0 0 1 exosome 0.438698701492868 0.438716704170578 0.44917274 0 hPsi_site_10066 iPseU_CNN:0.44917274;iRNA_PseU:0 10067 chr19 15852965 15852965 1 + A G GBM 15852964 + 15852944 15852984 41 ACTGTGGTGGTCATGCACTATAGTTTTGCCTCCCTTATCTA ACTGTGGTGGTCATGCACTATGGTTTTGCCTCCCTTATCTA < 41bp 0.873290622220643 0.535648100542221 0.29259366 0.21274257 prediction 0.675285043356845 Functional Loss - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852964 chr19:15852965 nonsynonymous SNV 0.101 0 22 hPsi_associated_SNPs_4650 0 0 0 0 0 unknown 0.438718383665491 0.43871856460393 0 0 hPsi_site_10067 iPseU_CNN:0;iRNA_PseU:0 10068 chr9 36150911 36150911 1 + A G STAD 36150910 + 36150890 36150930 41 GGTACAGTGAAATCAAGAACTATAACTTCCAGCAGCCTGGC GGTACAGTGAAATCAAGAACTGTAACTTCCAGCAGCCTGGC < 41bp 0.894449956448216 0.556825070388771 0.3304692 0.34327745 prediction 0.67524977211889 Functional Loss - GLIPR2 ENSG00000122694 CDS Human protein_coding chr9:36150910 chr9:36150911 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4651 0 0 0 0 2 Ribosome 0.438719853600424 0.438718148532333 0 0 hPsi_site_10068 iPseU_CNN:0;iRNA_PseU:0 10069 chr11 118471360 118471360 1 + A G rs144108474 118471359 + 118471339 118471379 41 GGTTACCAAAGTGACCCAGGTAGATGGAAACAGCCCCGTCA GGTTACCAAAGTGACCCAGGTGGATGGAAACAGCCCCGTCA < 41bp 0.885560184763622 0.547950532758179 0.51922345 0.2562396 prediction 0.675219304010886 Functional Loss - ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118471359 chr11:118471360 synonymous SNV . 0 22 hPsi_associated_SNPs_4652 0 0 1 0 1 Cytosol 0.438718592994844 0.438718592005888 0.0384469000000001 0 hPsi_site_10069 iPseU_CNN:0.0384469000000001;iRNA_PseU:0 10070 chr19 36038124 36038124 1 + A G UCEC 36038123 + 36038103 36038143 41 TGCTGATGTTCCTCAGTGTCTACAAGGCCTTTGTTATGGAG TGCTGATGTTCCTCAGTGTCTGCAAGGCCTTTGTTATGGAG < 41bp 0.887342884307223 0.549741299944232 0.22631204 0.23038426 prediction 0.675203168725982 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36038123 chr19:36038124 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4653 0 0 1 0 1 Endoplasmic reticulum 0.43871811935409 0.438718587219786 0 0 hPsi_site_10070 iPseU_CNN:0;iRNA_PseU:0 10071 chr11 65988190 65988190 1 + A G COAD 65988189 + 65988169 65988209 41 TGTATGACAGTCTGGAGATGTACAACCCCAGCGACAGTGGC TGTATGACAGTCTGGAGATGTGCAACCCCAGCGACAGTGGC < 41bp 0.901039518120167 0.563461981483531 0.76260525 0.60793716 prediction 0.675155073273271 Functional Loss - PACS1 ENSG00000175115 CDS Human protein_coding chr11:65988189 chr11:65988190 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4654 0 0 1 0 2 Cytosol 0.435674334492215 0.440455252819208 0.30933618 0 hPsi_site_10071 iPseU_CNN:0.30933618;iRNA_PseU:0 10072 chr12 4829921 4829921 1 + A G UCEC 4829920 + 4829900 4829940 41 TGCTGTCAATCTCCTTCTGGTATTTTCTAGCAAGGGGACTT TGCTGTCAATCTCCTTCTGGTGTTTTCTAGCAAGGGGACTT < 41bp 0.837573879265945 0.450394081961906 0.45464113 0.22273207 prediction 0.67514775853189 Functional Loss - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4829920 chr12:4829921 synonymous SNV . 0 22 hPsi_associated_SNPs_4655 0 0 0 0 0 cytosol 0.438718592994983 0.438718592982364 0 0 hPsi_site_10072 iPseU_CNN:0;iRNA_PseU:0 10073 chr5 134190991 134190991 1 + A G MESO 134190990 + 134190970 134191010 41 GGACAACTAAAGCTGCGGGATACAAAGTCAGCCCAGGCAGA GGACAACTAAAGCTGCGGGATGCAAAGTCAGCCCAGGCAGA < 41bp 0.878814471750215 0.541240851644631 0.64401436 0.29690307 prediction 0.675147240211166 Functional Loss - C5orf24 ENSG00000181904 CDS Human protein_coding chr5:134190990 chr5:134190991 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4656 0 0 1 0 1 chromatin 0.438718592999289 0.438718592998671 0.28802872 0 hPsi_site_10073 iPseU_CNN:0.28802872;iRNA_PseU:0 10074 chr5 140812017 140812017 1 + A G UCEC 140812016 + 140811996 140812036 41 ACAATGCGCCCGAGATCCTGTACCCCGCCCTCCCCACGGAC ACAATGCGCCCGAGATCCTGTGCCCCGCCCTCCCCACGGAC < 41bp 0.837573590776861 0.436832146748932 0.7586539 0.3241466 prediction 0.675147181553721 Functional Loss - PCDHGA12 ENSG00000253159 CDS Human protein_coding chr5:140812016 chr5:140812017 nonsynonymous SNV 0.698 3 22 hPsi_associated_SNPs_4657 0 0 0 0 0 exosome 0.438718497275239 0.438718563501666 0.5173078 0 hPsi_site_10074 iPseU_CNN:0.5173078;iRNA_PseU:0 10075 chr11 71260197 71260197 1 + A G STAD 71260196 + 71260176 71260216 41 GATGCTGTGTCCCTGTGTGCTACCAGTGCAAGATCTGAGGC GATGCTGTGTCCCTGTGTGCTGCCAGTGCAAGATCTGAGGC < 41bp 0.837570125042427 0.455186145013636 0.46684855 0.20986533 prediction 0.675140250084854 Functional Loss - KRTAP5-9 ENSG00000254997 CDS Human protein_coding chr11:71260196 chr11:71260197 nonsynonymous SNV 0.625 0 22 hPsi_associated_SNPs_4658 0 0 0 0 0 exosome 0.437233014221085 0.438735139897817 0 0 hPsi_site_10075 iPseU_CNN:0;iRNA_PseU:0 10076 chr21 45535786 45535786 1 + A G UCEC 45535785 + 45535765 45535805 41 AGAAGACAGGAAAAGTGAAGTACTCACGGCTGGCCAAGTAG AGAAGACAGGAAAAGTGAAGTGCTCACGGCTGGCCAAGTAG < 41bp 0.8375664427474 0.439434698303791 0.38041854 0.22572985 prediction 0.675132885494799 Functional Loss - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45535785 chr21:45535786 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_4659 0 0 0 0 1 Nucleus 0.438718592993619 0.438718591697599 0 0 hPsi_site_10076 iPseU_CNN:0;iRNA_PseU:0 10077 chr5 140481691 140481691 1 + A C rs151234490 140481690 + 140481670 140481710 41 CTCAGGCACCAACGCCCAGGTAACCTACTCGCTGCTGCCGC CTCAGGCACCAACGCCCAGGTCACCTACTCGCTGCTGCCGC < 41bp 0.837499646786674 0.491234345329415 0.584867 0.18278515 prediction 0.674999293573348 Functional Loss - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481690 chr5:140481691 synonymous SNV . 0 22 hPsi_associated_SNPs_4660 0 0 0 0 0 exosome 0.438718592995112 0.438718592995196 0.169734 0 hPsi_site_10077 iPseU_CNN:0.169734;iRNA_PseU:0 10078 chr13 58208920 58208920 1 + A G STAD 58208919 + 58208899 58208939 41 ACAACTGCCGCATCGCCGAGTACAGCCACCCGCAGCTGGGT ACAACTGCCGCATCGCCGAGTGCAGCCACCCGCAGCTGGGT < 41bp 0.837470746596058 0.433596785047081 0.6181813 0.3952148 prediction 0.674941493192115 Functional Loss - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58208919 chr13:58208920 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4661 0 0 0 0 0 exosome 0.438718493043565 0.43871858885076 0.2363626 0 hPsi_site_10078 iPseU_CNN:0.2363626;iRNA_PseU:0 10079 chr9 127118985 127118985 1 + T C rs115602550 127118986 - 127118966 127119006 41 GGCGTCGTGGCCACCCTTGGTATCTCCATGGCATCTGGATG GGCGTCGTGGCCACCCTTGGTGTCTCCATGGCATCTGGATG < 41bp 0.837467046288633 0.45639266177474 0.7661692 0.28192645 prediction 0.674934092577265 Functional Loss - LOC100129034 ENSG00000136930 UTR3 Human protein_coding chr9:127118986 chr9:127118985 . . 0 22 hPsi_associated_SNPs_4662 0 0 0 0 0 unknown 0.438698726672517 0.438718496056346 0.5323384 0 hPsi_site_10079 iPseU_CNN:0.5323384;iRNA_PseU:0 10080 chr2 3481544 3481544 1 + A G rs560729831 3481543 + 3481523 3481563 41 AAATTAGATGGACTACAGGGTAAAATCATGGTTTTGATGAA AAATTAGATGGACTACAGGGTGAAATCATGGTTTTGATGAA < 41bp 0.837434146439876 0.462794272265042 0.70284307 0.26057184 prediction 0.674868292879752 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3481543 chr2:3481544 nonsynonymous SNV 0.963 0 22 hPsi_associated_SNPs_4663 0 0 1 0 2 Ribosome 0.438718594170253 0.438436475850369 0.40568614 0 hPsi_site_10080 iPseU_CNN:0.40568614;iRNA_PseU:0 10081 chr6 151917602 151917602 1 + A C STAD 151917601 + 151917581 151917621 41 GAGAGGGACAACGCGCATCTTACCATCAGGAACTTGCAGAA GAGAGGGACAACGCGCATCTTCCCATCAGGAACTTGCAGAA < 41bp 0.837410171221376 0.479900546120623 0.28631762 0.20355818 prediction 0.674820342442752 Functional Loss - CCDC170 ENSG00000120262 CDS Human protein_coding chr6:151917601 chr6:151917602 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_4664 0 0 1 0 0 Nucleus 0.439877951310829 0.438732959354743 0 0 hPsi_site_10081 iPseU_CNN:0;iRNA_PseU:0 10082 chr5 55185844 55185844 1 + A G GBM 55185843 + 55185823 55185863 41 GTAAGGATAAAAACCAAACGTACAACCTCACGGGGCTGCAG GTAAGGATAAAAACCAAACGTGCAACCTCACGGGGCTGCAG < 41bp 0.837341049594996 0.432372304195577 0.74071926 0.27236694 prediction 0.674682099189992 Functional Loss - IL31RA ENSG00000164509 CDS Human protein_coding chr5:55185843 chr5:55185844 nonsynonymous SNV 0.749 1 22 hPsi_associated_SNPs_4665 0 0 0 0 1 exosome 0.438719842737056 0.438718598638482 0.48143852 0 hPsi_site_10082 iPseU_CNN:0.48143852;iRNA_PseU:0 10083 chr19 17844201 17844201 1 + A G UCEC 17844200 + 17844180 17844220 41 GCGGGCCGTCCTGGACGCGCTACTGGCCAGCAAGCAGCATT GCGGGCCGTCCTGGACGCGCTGCTGGCCAGCAAGCAGCATT < 41bp 0.892673241759332 0.555354205051489 0.70271516 0.18544883 prediction 0.674638073415686 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17844200 chr19:17844201 synonymous SNV . 0 22 hPsi_associated_SNPs_4666 0 0 1 0 1 Cytosol 0.439023877652262 0.43875721745811 0.40543032 0 hPsi_site_10083 iPseU_CNN:0.40543032;iRNA_PseU:0 10084 chr1 160321065 160321065 1 + A G rs12239747 160321064 + 160321044 160321084 41 CTCAGCACCAACCTTCCCACTATGTGCCATGCAGCTCTTTT CTCAGCACCAACCTTCCCACTGTGTGCCATGCAGCTCTTTT < 41bp 0.837284202866436 0.43200276093506 0.24757984 0.1803321 prediction 0.674568405732872 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160321064 chr1:160321065 synonymous SNV . 0 22 hPsi_associated_SNPs_4667 1 0 1 0 2 Endoplasmic reticulum 0.435767636323806 0.437343866632589 0 0 hPsi_site_10084 iPseU_CNN:0;iRNA_PseU:0 10085 chr8 82670976 82670976 1 + A G rs113552911 82670975 + 82670955 82670995 41 GTGATGGAGGCCAGGCACGGTATCTCATGCCTATAATCCCA GTGATGGAGGCCAGGCACGGTGTCTCATGCCTATAATCCCA < 41bp 0.861806931327734 0.524527458244402 0.7904352 0.32061005 prediction 0.674558946166664 Functional Loss - CHMP4C ENSG00000164695 UTR3 Human protein_coding chr8:82670975 chr8:82670976 . . 0 22 hPsi_associated_SNPs_4668 0 0 0 0 0 Ribosome 0.438718594996851 0.438718594603339 0.5808704 0 hPsi_site_10085 iPseU_CNN:0.5808704;iRNA_PseU:0 10086 chr6 83869602 83869602 1 + A C LUSC 83869601 + 83869581 83869621 41 ATATAACAGCCAGCGGTGGTTAAACCTCTATCTCTCTGCTT ATATAACAGCCAGCGGTGGTTCAACCTCTATCTCTCTGCTT < 41bp 0.837460555334563 0.500191513173822 0.4050786 0.24792644 prediction 0.674538084321483 Functional Loss - DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83869601 chr6:83869602 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4669 0 0 1 0 2 Cytosol 0.438701024959072 0.438811307476679 0 0 hPsi_site_10086 iPseU_CNN:0;iRNA_PseU:0 10087 chr19 58050249 58050249 1 + A G SKCM 58050248 + 58050228 58050268 41 GGAAAGCCTTCAACAAAAGATATTCCCTTGTCAGGCACCAG GGAAAGCCTTCAACAAAAGATGTTCCCTTGTCAGGCACCAG < 41bp 0.837267960391175 0.450499332246707 0.60186565 0.27681738 prediction 0.67453592078235 Functional Loss - ZNF549 ENSG00000121406 CDS Human protein_coding chr19:58050248 chr19:58050249 nonsynonymous SNV 0.034 1 22 hPsi_associated_SNPs_4670 0 0 0 0 0 exosome 0.438718593133756 0.438718593122363 0.2037313 0 hPsi_site_10087 iPseU_CNN:0.2037313;iRNA_PseU:0 10088 chr9 125316406 125316406 1 + A G BLCA 125316405 + 125316385 125316425 41 GACATGAAGGAGGCTTTGGGTAAACTTTTTGTCAGTGGAAA GACATGAAGGAGGCTTTGGGTGAACTTTTTGTCAGTGGAAA < 41bp 0.858916141938028 0.521686008082522 0.30896604 0.25310552 prediction 0.674460267711013 Functional Loss - OR1N2 ENSG00000171501 CDS Human protein_coding chr9:125316405 chr9:125316406 nonsynonymous SNV 0.071 1 22 hPsi_associated_SNPs_4671 0 0 0 0 0 unknown 0.43868247288912 0.438727743635761 0 0 hPsi_site_10088 iPseU_CNN:0;iRNA_PseU:0 10089 chr6 43613008 43613008 1 + A G UCEC 43613007 + 43612987 43613027 41 TTGGCCTCGTCGCCGATTACTACATCGCGCAGGGCCTGAGT TTGGCCTCGTCGCCGATTACTGCATCGCGCAGGGCCTGAGT < 41bp 0.883562135351928 0.546332076162884 0.5043478 0.285123 prediction 0.674460118378088 Functional Loss - RSPH9 ENSG00000172426 CDS Human protein_coding chr6:43613007 chr6:43613008 nonsynonymous SNV 0.963 3 22 hPsi_associated_SNPs_4672 0 0 0 0 1 chromatin 0.438704075484764 0.437986570227122 0.00869560000000003 0 hPsi_site_10089 iPseU_CNN:0.00869560000000003;iRNA_PseU:0 10090 chr5 157158516 157158516 1 + A G STAD 157158515 + 157158495 157158535 41 TTTCCATCACTCTGAGACGGTACCTGAGATTGGGGGCGACC TTTCCATCACTCTGAGACGGTGCCTGAGATTGGGGGCGACC < 41bp 0.837203971540801 0.445866192536731 0.94942796 0.32797158 prediction 0.674407943081601 Functional Loss - THG1L ENSG00000113272 CDS Human protein_coding chr5:157158515 chr5:157158516 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_4673 0 0 1 0 0 Nucleus 0.438718554271686 0.438718907414152 0.89885592 0 hPsi_site_10090 iPseU_CNN:0.89885592;iRNA_PseU:0 10091 chrX 118603951 118603951 1 + A G COAD 118603950 + 118603930 118603970 41 CGTCTAGCAGCTGATGTGGGTAAAGCTGGAGCTGAAAGGGA CGTCTAGCAGCTGATGTGGGTGAAGCTGGAGCTGAAAGGGA < 41bp 0.895192074377134 0.558021912160682 0.3150031 0.1449584 prediction 0.674340324432903 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118603950 chrX:118603951 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_4674 0 0 1 0 0 Cytosol 0.438723183746705 0.438718491177636 0 0 hPsi_site_10091 iPseU_CNN:0;iRNA_PseU:0 10092 chr5 1814521 1814521 1 + A G COAD 1814520 + 1814500 1814540 41 CGAGGTGGAGACTCGGGTGATAGCGTGCGATGGCGGCGGGG CGAGGTGGAGACTCGGGTGATGGCGTGCGATGGCGGCGGGG < 41bp 0.898624066666407 0.561465913674908 0.37452304 0.2773543 prediction 0.674316305982999 Functional Loss - NDUFS6 ENSG00000145494 CDS Human protein_coding chr5:1814520 chr5:1814521 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4675 0 0 1 0 2 Ribosome 0.438765275045721 0.4384469811995 0 0 hPsi_site_10092 iPseU_CNN:0;iRNA_PseU:0 10093 chr11 95551044 95551044 1 + A C LUSC 95551043 + 95551023 95551063 41 GAACAGGAGTATAACAAACTTACCACAATGCAGGCCCTTGC GAACAGGAGTATAACAAACTTCCCACAATGCAGGCCCTTGC < 41bp 0.837151416423456 0.482192014881195 0.29450116 0.24751067 prediction 0.674302832846912 Functional Loss - CEP57 ENSG00000166037 CDS Human protein_coding chr11:95551043 chr11:95551044 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_4676 0 0 1 0 2 Nucleus 0.438284590686522 0.438708505453933 0 0 hPsi_site_10093 iPseU_CNN:0;iRNA_PseU:0 10094 chr7 87022117 87022117 1 + A G LUSC 87022116 + 87022096 87022136 41 CTTCCTGTTCCAGAACTCTTTACGGACCCACTTTTTTCCAA CTTCCTGTTCCAGAACTCTTTGCGGACCCACTTTTTTCCAA < 41bp 0.837150829220956 0.438545469324977 0.645364 0.24674541 prediction 0.674301658441912 Functional Loss - CROT ENSG00000005469 CDS Human protein_coding chr7:87022116 chr7:87022117 nonsynonymous SNV 0.667 0 22 hPsi_associated_SNPs_4677 0 0 1 0 2 Nucleus 0.438718593045713 0.43871859295952 0.290728 0 hPsi_site_10094 iPseU_CNN:0.290728;iRNA_PseU:0 10095 chr7 152161265 152161265 1 + A G rs62492102 152161264 + 152161244 152161284 41 CTTCCTCTTCCTGCCCGCGGTAGTGGGGGTGGGGCAGGCCT CTTCCTCTTCCTGCCCGCGGTGGTGGGGGTGGGGCAGGCCT < 41bp 0.8371244664833 0.483464416977143 0.7434821 0.31596535 prediction 0.674248932966601 Functional Loss - LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161264 chr7:152161265 . . 0 22 hPsi_associated_SNPs_4678 0 0 1 0 0 unknown 0.438718592969277 0.438718592995102 0.4869642 0 hPsi_site_10095 iPseU_CNN:0.4869642;iRNA_PseU:0 10096 chr12 97051711 97051711 1 + A G LUSC 97051710 + 97051690 97051730 41 CCAAGCTGTTATGGGAATATTAAAAATGACAACGGTGGTTC CCAAGCTGTTATGGGAATATTGAAAATGACAACGGTGGTTC < 41bp 0.83709868943442 0.46267364053051 0.2556383 0.2576344 prediction 0.67419737886884 Functional Loss - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:97051710 chr12:97051711 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4679 0 0 0 0 1 exosome 0.438718533988008 0.438730318816357 0 0 hPsi_site_10096 iPseU_CNN:0;iRNA_PseU:0 10097 chr6 168431458 168431458 1 + A C HNSC 168431457 + 168431437 168431477 41 TCACTTTGTCTCTCAGGGTTTATGGTCCAGCAGAGTCTCAG TCACTTTGTCTCTCAGGGTTTCTGGTCCAGCAGAGTCTCAG < 41bp 0.843243850938194 0.506167245703051 0.43691096 0.40890855 prediction 0.674153210470285 Functional Loss - KIF25 ENSG00000125337 CDS Human protein_coding chr6:168431457 chr6:168431458 nonsynonymous SNV 0.040 4 22 hPsi_associated_SNPs_4680 0 0 0 0 1 exosome 0.43873612821791 0.438726381816888 0 0 hPsi_site_10097 iPseU_CNN:0;iRNA_PseU:0 10098 chr3 100170652 100170652 1 + A G PAAD 100170651 + 100170631 100170671 41 ATTTCGATGCCGTAGCCACGTACGGGATTACAGAAAATACT ATTTCGATGCCGTAGCCACGTGCGGGATTACAGAAAATACT < 41bp 0.893547851375553 0.556496271250276 0.6540905 0.3505246 prediction 0.674103160250553 Functional Loss - LNP1 ENSG00000206535 CDS Human protein_coding chr3:100170651 chr3:100170652 synonymous SNV . 0 22 hPsi_associated_SNPs_4681 0 0 0 0 1 chromatin 0.438718242256501 0.438719664124123 0.308181 0 hPsi_site_10098 iPseU_CNN:0.308181;iRNA_PseU:0 10099 chr3 179287996 179287996 1 + A G UCEC 179287995 + 179287975 179288015 41 CTGCGTGTTCCGAGGGAGAATATGGAGGCCATTTCACCTCT CTGCGTGTTCCGAGGGAGAATGTGGAGGCCATTTCACCTCT < 41bp 0.837046565193549 0.440332465732868 0.465104 0.4544336 prediction 0.674093130387099 Functional Loss - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179287995 chr3:179287996 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_4682 0 0 1 0 1 Ribosome 0.438718012829516 0.438718204523419 0 0 hPsi_site_10099 iPseU_CNN:0;iRNA_PseU:0 10100 chr3 63638376 63638376 1 + A G COAD 63638375 + 63638355 63638395 41 GATGAGAGAATGGGTGGCTGTATGCACAGTACCCAGGACAA GATGAGAGAATGGGTGGCTGTGTGCACAGTACCCAGGACAA < 41bp 0.837037069282606 0.459176499918181 0.6500782 0.34372044 prediction 0.674074138565211 Functional Loss - SNTN ENSG00000188817 CDS Human protein_coding chr3:63638375 chr3:63638376 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_4683 0 0 0 0 1 unknown 0.438717942248297 0.438717569382771 0.3001564 0 hPsi_site_10100 iPseU_CNN:0.3001564;iRNA_PseU:0 10101 chr5 3600153 3600153 1 + A G STAD 3600152 + 3600132 3600172 41 TCCTGCCTAGCCACGGACTGTACACCTGCCACATCGGCAAG TCCTGCCTAGCCACGGACTGTGCACCTGCCACATCGGCAAG < 41bp 0.890243864311553 0.553241846087379 0.61123717 0.2798289 prediction 0.674004036448349 Functional Loss - IRX1 ENSG00000170549 CDS Human protein_coding chr5:3600152 chr5:3600153 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4684 0 0 0 0 0 exosome 0.438698341723215 0.438642349147867 0.22247434 0 hPsi_site_10101 iPseU_CNN:0.22247434;iRNA_PseU:0 10102 chr19 35230127 35230127 1 + A G UCEC 35230126 + 35230106 35230146 41 CAGTTCTGCTCAGAGGGACTTATACAAGGATGTGATGGTCC CAGTTCTGCTCAGAGGGACTTGTACAAGGATGTGATGGTCC < 41bp 0.83914797450329 0.502146083107769 0.30747563 0.23670644 prediction 0.674003782791042 Functional Loss - ZNF181 ENSG00000197841 CDS Human protein_coding chr19:35230126 chr19:35230127 synonymous SNV . 0 22 hPsi_associated_SNPs_4685 0 0 1 0 2 nucleus 0.438718578540486 0.438718114673728 0 0 hPsi_site_10102 iPseU_CNN:0;iRNA_PseU:0 10103 chr5 140554258 140554258 1 + A G LUAD 140554257 + 140554237 140554277 41 CAAGGCCACGGAGCCCGGGCTATTCGGCGTGTGGGCGCACA CAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCACA < 41bp 0.836986247543427 0.44483721790346 0.7507918 0.46665165 prediction 0.673972495086854 Functional Loss - PCDHB7 ENSG00000113212 CDS Human protein_coding chr5:140554257 chr5:140554258 synonymous SNV . 0 22 hPsi_associated_SNPs_4686 0 0 0 0 0 exosome 0.43871757459622 0.438704208866683 0.5015836 0 hPsi_site_10103 iPseU_CNN:0.5015836;iRNA_PseU:0 10104 chr16 8806922 8806922 1 + A G rs2241103 8806921 + 8806901 8806941 41 AGTTGGGTAATCGCTCCCGGTAGGTTCCTCCCCAACCCCCG AGTTGGGTAATCGCTCCCGGTGGGTTCCTCCCCAACCCCCG < 41bp 0.836980462144905 0.455545053914121 0.7696667 0.3751241 prediction 0.673960924289811 Functional Loss - ABAT ENSG00000183044 UTR5 Human protein_coding chr16:8806921 chr16:8806922 . . 0 22 hPsi_associated_SNPs_4687 0 0 0 0 0 cytosol 0.438718592995103 0.438718632537613 0.5393334 0 hPsi_site_10104 iPseU_CNN:0.5393334;iRNA_PseU:0 10105 chr8 59359975 59359975 1 + A G UCEC 59359974 + 59359954 59359994 41 GGATGTCCGGAACTTTATTGTACAGTCTCGTCCTGAATTTG GGATGTCCGGAACTTTATTGTGCAGTCTCGTCCTGAATTTG < 41bp 0.885586047375397 0.548614300458618 0.4570101 0.21782938 prediction 0.673943493833557 Functional Loss - UBXN2B ENSG00000215114 CDS Human protein_coding chr8:59359974 chr8:59359975 synonymous SNV . 0 22 hPsi_associated_SNPs_4688 0 0 1 0 1 Cytosol 0.438481232118625 0.437201715283545 0 0 hPsi_site_10105 iPseU_CNN:0;iRNA_PseU:0 10106 chr17 32964387 32964387 1 + A G UCEC 32964386 + 32964366 32964406 41 GGAGCTGCTTCGCGCAGAGCTAACCATCGCTGAGAGCTGCC GGAGCTGCTTCGCGCAGAGCTGACCATCGCTGAGAGCTGCC < 41bp 0.836966218927215 0.430675684578254 0.31166184 0.17279309 prediction 0.673932437854429 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32964386 chr17:32964387 synonymous SNV . 0 22 hPsi_associated_SNPs_4689 0 0 1 0 0 exosome 0.438718745994407 0.438792090555342 0 0 hPsi_site_10106 iPseU_CNN:0;iRNA_PseU:0 10107 chr5 140803035 140803035 1 + A G UCEC 140803034 + 140803014 140803054 41 TTTTGTAGGCGTGGACGGGGTACAGGCTTTCCTGCAAACCT TTTTGTAGGCGTGGACGGGGTGCAGGCTTTCCTGCAAACCT < 41bp 0.883377497117164 0.546423064840388 0.8625716 0.58371764 prediction 0.673908864553553 Functional Loss - PCDHGA11 ENSG00000253873 CDS Human protein_coding chr5:140803034 chr5:140803035 synonymous SNV . 0 22 hPsi_associated_SNPs_4690 0 0 0 0 0 exosome 0.438718581526648 0.438718460056416 0.55770792 0 hPsi_site_10107 iPseU_CNN:0.55770792;iRNA_PseU:0 10108 chr11 130066277 130066277 1 + A G UCEC 130066276 + 130066256 130066296 41 AGGTGCGCTTCAAATTCTTCTACCTGCTGGAGCCCGGCGTG AGGTGCGCTTCAAATTCTTCTGCCTGCTGGAGCCCGGCGTG < 41bp 0.836917869942851 0.414565783650693 0.31668913 0.19448224 prediction 0.673835739885703 Functional Loss - ST14 ENSG00000149418 CDS Human protein_coding chr11:130066276 chr11:130066277 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_4691 0 0 0 0 2 Ribosome 0.438718543282801 0.438711483692333 0 0 hPsi_site_10108 iPseU_CNN:0;iRNA_PseU:0 10109 chr2 170366329 170366329 1 + A G UCEC 170366328 + 170366308 170366348 41 TTGCAGAGGAACTGCGGCTTTACCAATCCACCCTTCTTCAG TTGCAGAGGAACTGCGGCTTTGCCAATCCACCCTTCTTCAG < 41bp 0.836916882897714 0.448355570527264 0.6303045 0.24648318 prediction 0.673833765795428 Functional Loss - KLHL41 ENSG00000239474 CDS Human protein_coding chr2:170366328 chr2:170366329 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4692 0 0 0 0 0 nucleoplasm 0.438715740710794 0.438718440960772 0.260609 0 hPsi_site_10109 iPseU_CNN:0.260609;iRNA_PseU:0 10110 chr1 26597582 26597582 1 + A G UCEC 26597581 + 26597561 26597601 41 TGGAGTCCTGGCAGAAGCGATACGATTCGCTCCAAAAGGTG TGGAGTCCTGGCAGAAGCGATGCGATTCGCTCCAAAAGGTG < 41bp 0.836896347043468 0.422953569776648 0.686975 0.34441903 prediction 0.673792694086936 Functional Loss - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26597581 chr1:26597582 nonsynonymous SNV 0.043 0 22 hPsi_associated_SNPs_4693 0 0 1 0 2 Nucleus 0.438798359605069 0.438727643488841 0.37395 0 hPsi_site_10110 iPseU_CNN:0.37395;iRNA_PseU:0 10111 chr16 3265997 3265997 1 + A G UCEC 3265996 + 3265976 3266016 41 TGTCGCCGTGTGCCGCCCCTTACATTACACAGCAAAGATGA TGTCGCCGTGTGCCGCCCCTTGCATTACACAGCAAAGATGA < 41bp 0.864051811363853 0.527161846547212 0.93770117 0.6564419 prediction 0.673779929633283 Functional Loss - OR1F2P ENSG00000203581 ncRNA_exonic Human unprocessed_pseudogene chr16:3265996 chr16:3265997 . . 0 22 hPsi_associated_SNPs_4694 0 0 0 0 0 unknown 0.438647062815825 0.440017290571542 0.56251854 0 hPsi_site_10111 iPseU_CNN:0.56251854;iRNA_PseU:0 10112 chr12 56346661 56346661 1 + A G COAD 56346660 + 56346640 56346680 41 CTATGGGATCAACCAGGCCTTAGGTGCTACAGCTAAAGTCA CTATGGGATCAACCAGGCCTTGGGTGCTACAGCTAAAGTCA < 41bp 0.893196736297209 0.556317310980763 0.556523 0.28730732 prediction 0.673758850632891 Functional Loss - DGKA ENSG00000065357 CDS Human protein_coding chr12:56346660 chr12:56346661 synonymous SNV . 0 22 hPsi_associated_SNPs_4695 0 0 0 0 0 Cytosol 0.43867380738781 0.438718598083057 0.113046 0 hPsi_site_10112 iPseU_CNN:0.113046;iRNA_PseU:0 10113 chr3 45038731 45038731 1 + A G COAD 45038730 + 45038710 45038750 41 GGGAGCACTGCTGGGTTCTCTATGTGGATGTGCTGGTGAGT GGGAGCACTGCTGGGTTCTCTGTGTGGATGTGCTGGTGAGT < 41bp 0.836879127008205 0.430402034643486 0.67173266 0.37138665 prediction 0.67375825401641 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45038730 chr3:45038731 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_4696 0 0 1 0 1 Ribosome 0.438951358545002 0.439322117404278 0.34346532 0 hPsi_site_10113 iPseU_CNN:0.34346532;iRNA_PseU:0 10114 chr11 111958619 111958619 1 + A G KIRP 111958618 + 111958598 111958638 41 CCAGTGGTCAGACCTGCTCATATCTCAGCATTTCTTCAGGA CCAGTGGTCAGACCTGCTCATGTCTCAGCATTTCTTCAGGA < 41bp 0.836869538865675 0.433140209334426 0.39132154 0.2589905 prediction 0.673739077731349 Functional Loss - SDHD ENSG00000204370;ENSG00000255292 CDS Human other chr11:111958618 chr11:111958619 nonsynonymous SNV 0.550 0 22 hPsi_associated_SNPs_4697 0 0 1 0 2 Ribosome 0.439770168817472 0.438045748549137 0 0 hPsi_site_10114 iPseU_CNN:0;iRNA_PseU:0 10115 chr3 8579092 8579092 1 + A G SKCM 8579091 + 8579071 8579111 41 CCACTTTTGACACCATCACCTACGAGTGGGCTCCCCCTGGA CCACTTTTGACACCATCACCTGCGAGTGGGCTCCCCCTGGA < 41bp 0.83684969495203 0.426257246031073 0.6807196 0.29153913 prediction 0.67369938990406 Functional Loss - LMCD1 ENSG00000071282 CDS Human protein_coding chr3:8579091 chr3:8579092 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_4698 0 0 0 0 1 exosome 0.439451834558662 0.436795725359052 0.3614392 0 hPsi_site_10115 iPseU_CNN:0.3614392;iRNA_PseU:0 10116 chr6 35745671 35745671 1 + A G rs148776551 35745670 + 35745650 35745690 41 GGGATCGCATCATATTCATCTATGAAGCACCTACCCCCAGC GGGATCGCATCATATTCATCTGTGAAGCACCTACCCCCAGC < 41bp 0.890877841700755 0.554030862939656 0.45086256 0.38349494 prediction 0.673693957522198 Functional Loss - CLPSL2 ENSG00000196748 CDS Human protein_coding chr6:35745670 chr6:35745671 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_4699 0 0 0 0 2 exosome 0.438630286307027 0.438359095452657 0 0 hPsi_site_10116 iPseU_CNN:0;iRNA_PseU:0 10117 chr11 118263582 118263582 1 + A C rs59986087 118263581 + 118263561 118263601 41 TCTTCCAGAGTCACTGTGGATAGATCCACCATTGCAAGACA TCTTCCAGAGTCACTGTGGATCGATCCACCATTGCAAGACA < 41bp 0.836835864069791 0.48885816595431 0.5731699 0.35536957 prediction 0.673671728139583 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118263581 chr11:118263582 synonymous SNV . 0 22 hPsi_associated_SNPs_4700 0 0 1 0 1 Nucleus 0.438746661305765 0.438641435513289 0.1463398 0 hPsi_site_10117 iPseU_CNN:0.1463398;iRNA_PseU:0 10118 chr1 24106358 24106358 1 + A G COAD 24106357 + 24106337 24106377 41 CTTTTGCATTCTGGCAGATTTACGGGCAATGTCAAGCTCAA CTTTTGCATTCTGGCAGATTTGCGGGCAATGTCAAGCTCAA < 41bp 0.886861917409129 0.550038209955968 0.4304316 0.212518 prediction 0.673647414906323 Functional Loss - PITHD1 ENSG00000057757 CDS Human protein_coding chr1:24106357 chr1:24106358 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4701 0 0 1 0 2 Ribosome 0.438701069703033 0.438532183054367 0 0 hPsi_site_10118 iPseU_CNN:0;iRNA_PseU:0 10119 chr2 202074207 202074207 1 + A G rs17860405 202074206 + 202074186 202074226 41 GTCTGGCCACTGTCCCAGGCTATGTATCCTTTCGGCATGTG GTCTGGCCACTGTCCCAGGCTGTGTATCCTTTCGGCATGTG < 41bp 0.898122942753272 0.561328673373612 0.25835913 0.22905189 prediction 0.67358853875932 Functional Loss - CASP10 ENSG00000003400 CDS Human protein_coding chr2:202074206 chr2:202074207 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_4702 2 0 1 0 1 Nucleus 0.438718555814079 0.438718569738591 0 0 hPsi_site_10119 iPseU_CNN:0;iRNA_PseU:0 10120 chr8 101232602 101232602 1 + A G UCEC 101232601 + 101232581 101232621 41 ATGGGAAAGCTTATGTGGATTATAAAACAGTGTTGCAGATA ATGGGAAAGCTTATGTGGATTGTAAAACAGTGTTGCAGATA < 41bp 0.836792087564171 0.446858807218283 0.5354133 0.32730836 prediction 0.673584175128342 Functional Loss - SPAG1 ENSG00000104450 CDS Human protein_coding chr8:101232601 chr8:101232602 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4703 0 0 0 0 2 chromatin 0.43871859313477 0.438718596060297 0.0708266 0 hPsi_site_10120 iPseU_CNN:0.0708266;iRNA_PseU:0 Heel bone mineral density 10121 chr12 55641144 55641144 1 + A G CESC 55641143 + 55641123 55641163 41 GATCCACAATTACAGGTGATTATTTTTCTTCTCCTTTTTTT GATCCACAATTACAGGTGATTGTTTTTCTTCTCCTTTTTTT < 41bp 0.849633246532228 0.512847007672059 0.2907505 0.21278626 prediction 0.673572477720339 Functional Loss - OR6C74 ENSG00000197706 CDS Human protein_coding chr12:55641143 chr12:55641144 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_4704 0 0 0 0 0 unknown 0.438721369053829 0.438729722802846 0 0 hPsi_site_10121 iPseU_CNN:0;iRNA_PseU:0 10122 chr1 207010044 207010044 1 + A G HNSC 207010043 + 207010023 207010063 41 GTTTCCCTTTGGCTCCTGGGTACAATACTGATATTGTGCTC GTTTCCCTTTGGCTCCTGGGTGCAATACTGATATTGTGCTC < 41bp 0.836748916369323 0.439151166461374 0.97063035 0.870054 prediction 0.673497832738645 Functional Loss - IL19 ENSG00000142224 CDS Human protein_coding chr1:207010043 chr1:207010044 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4705 0 0 0 0 0 exosome 0.438718614923337 0.43871889556977 0.2011527 0 hPsi_site_10122 iPseU_CNN:0.2011527;iRNA_PseU:0 10123 chr8 97342466 97342466 1 + A G BLCA 97342465 + 97342445 97342485 41 TCACCACTTTCCTCTGTCTGTACGGCATGATTTGGTATGCA TCACCACTTTCCTCTGTCTGTGCGGCATGATTTGGTATGCA < 41bp 0.836710865453791 0.422656517602862 0.50761104 0.19393292 prediction 0.673421730907581 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97342465 chr8:97342466 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4706 0 0 1 0 2 Ribosome 0.438718604235144 0.438719289584809 0.01522208 0 hPsi_site_10123 iPseU_CNN:0.01522208;iRNA_PseU:0 10124 chr8 104394720 104394720 1 + A G SKCM 104394719 + 104394699 104394739 41 TGAAGGAATTGGTGCTGGATTAGTGGATGTTGCTATCTGGG TGAAGGAATTGGTGCTGGATTGGTGGATGTTGCTATCTGGG < 41bp 0.836710364538655 0.44783825219704 0.65328085 0.27769858 prediction 0.673420729077309 Functional Loss - CTHRC1 ENSG00000164932 CDS Human protein_coding chr8:104394719 chr8:104394720 synonymous SNV . 0 22 hPsi_associated_SNPs_4707 0 0 0 0 1 nucleus 0.43871855965491 0.438718592878804 0.3065617 0 hPsi_site_10124 iPseU_CNN:0.3065617;iRNA_PseU:0 10125 chr20 35827516 35827516 1 + A G READ 35827515 + 35827495 35827535 41 GTCAGTGAGGACTCATCTGTTACCCAGATCTACCATGCAGT GTCAGTGAGGACTCATCTGTTGCCCAGATCTACCATGCAGT < 41bp 0.89840010490692 0.561735189434381 0.51962405 0.23681298 prediction 0.673329830945077 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35827515 chr20:35827516 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_4708 0 0 1 0 1 Ribosome 0.447006471761586 0.45156827057685 0.0392481 0 hPsi_site_10125 iPseU_CNN:0.0392481;iRNA_PseU:0 10126 chr19 2917823 2917823 1 + A G COAD 2917822 + 2917802 2917842 41 GAACAATGTGGGAAGGCTTTTACCTCTTCCAGATCATTCCG GAACAATGTGGGAAGGCTTTTGCCTCTTCCAGATCATTCCG < 41bp 0.889510092242195 0.552902434752508 0.7984549 0.36578208 prediction 0.673215314979374 Functional Loss - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917822 chr19:2917823 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4709 0 0 0 0 0 nucleoplasm 0.438510529113402 0.438813994554915 0.5969098 0 hPsi_site_10126 iPseU_CNN:0.5969098;iRNA_PseU:0 10127 chr11 123777307 123777307 1 + A G COAD 123777306 + 123777286 123777326 41 AGGCTGAATCGTCAACTTCATACCCCCATGTACTATTTCCT AGGCTGAATCGTCAACTTCATGCCCCCATGTACTATTTCCT < 41bp 0.868811435127523 0.532269996167914 0.3278445 0.14603734 prediction 0.673082877919218 Functional Loss - OR8D4 ENSG00000181518 CDS Human protein_coding chr11:123777306 chr11:123777307 nonsynonymous SNV 0.958 1 22 hPsi_associated_SNPs_4710 0 0 0 0 0 unknown 0.438721450453217 0.438721125296318 0 0 hPsi_site_10127 iPseU_CNN:0;iRNA_PseU:0 10128 chr3 101284410 101284410 1 + A G OV 101284409 + 101284389 101284429 41 ACAGAGAGTTAGTTAAACGGTATCAAGAAAAATGGGACAAA ACAGAGAGTTAGTTAAACGGTGTCAAGAAAAATGGGACAAA < 41bp 0.836512575298108 0.451833479680785 0.80542433 0.39038092 prediction 0.673025150596215 Functional Loss - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101284409 chr3:101284410 nonsynonymous SNV 0.445 3 22 hPsi_associated_SNPs_4711 0 0 1 0 0 Ribosome 0.438718598854358 0.438718684770394 0.61084866 0 hPsi_site_10128 iPseU_CNN:0.61084866;iRNA_PseU:0 10129 chr19 32949349 32949349 1 + A G BRCA 32949348 + 32949328 32949368 41 TTTCAGATACTCTGCTTTTTTATGCTTACATATTCGTTCTG TTTCAGATACTCTGCTTTTTTGTGCTTACATATTCGTTCTG < 41bp 0.836510745232826 0.451654879285918 0.29155934 0.23941886 prediction 0.673021490465652 Functional Loss - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32949348 chr19:32949349 nonsynonymous SNV 0.758 1 22 hPsi_associated_SNPs_4712 0 0 1 0 2 cytosol 0.418175626617745 0.425123224227425 0 0 hPsi_site_10129 iPseU_CNN:0;iRNA_PseU:0 10130 chr3 97852291 97852291 1 + A G rs112819024 97852290 + 97852270 97852310 41 CCATCTCTTCTCTGTCTCTTTATACTATGGACCCCTTCTCT CCATCTCTTCTCTGTCTCTTTGTACTATGGACCCCTTCTCT < 41bp 0.867750395951699 0.531267266492482 0.26753336 0.27957422 prediction 0.672966258918434 Functional Loss - OR5H1 ENSG00000231192 CDS Human protein_coding chr3:97852290 chr3:97852291 synonymous SNV . 0 22 hPsi_associated_SNPs_4713 0 0 0 0 0 unknown 0.438718593035304 0.438718593139675 0 0 hPsi_site_10130 iPseU_CNN:0;iRNA_PseU:0 10131 chr18 12274225 12274225 1 + A G UCEC 12274224 + 12274204 12274244 41 AGGCCACCATGTATGAGATGTACTCCGTGTCCTACGACATC AGGCCACCATGTATGAGATGTGCTCCGTGTCCTACGACATC < 41bp 0.836470611792169 0.433093014840374 0.7752433 0.47095734 prediction 0.672941223584338 Functional Loss - CIDEA ENSG00000176194 CDS Human protein_coding chr18:12274224 chr18:12274225 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_4714 0 0 0 0 1 unknown 0.432686857852658 0.426734412349657 0.5504866 0 hPsi_site_10131 iPseU_CNN:0.5504866;iRNA_PseU:0 10132 chr14 20389589 20389589 1 + A G COAD 20389588 + 20389568 20389608 41 ATAAATTTCTTGCCATATTTTACACTGTTTTCACCCCCGTC ATAAATTTCTTGCCATATTTTGCACTGTTTTCACCCCCGTC < 41bp 0.871369151098995 0.534911089761757 0.21472761 0.21887654 prediction 0.672916122674477 Functional Loss - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20389588 chr14:20389589 nonsynonymous SNV 0.791 3 22 hPsi_associated_SNPs_4715 0 0 0 0 0 unknown 0.438718592995102 0.438718592995525 0 0 hPsi_site_10132 iPseU_CNN:0;iRNA_PseU:0 10133 chr16 67683449 67683449 1 + A G rs118040419 67683448 + 67683428 67683468 41 CCTAACCTGACCGCGCTGGATATCAGCGGCAACGCCATGGG CCTAACCTGACCGCGCTGGATGTCAGCGGCAACGCCATGGG < 41bp 0.896268240291395 0.55982691977109 0.6939585 0.44369164 prediction 0.672882641040611 Functional Loss - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67683448 chr16:67683449 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4716 0 0 0 0 2 chromatin 0.438581835932752 0.43840637493929 0.387917 0 hPsi_site_10133 iPseU_CNN:0.387917;iRNA_PseU:0 10134 chr1 159785425 159785425 1 + A G rs4443889 159785424 + 159785404 159785444 41 AGGACTCTCCAAGAACCCCTTAGCGACTGTGAGGAGGTTCT AGGACTCTCCAAGAACCCCTTGGCGACTGTGAGGAGGTTCT < 41bp 0.836426844293839 0.45131779529431 0.37925982 0.2985673 prediction 0.672853688587678 Functional Loss - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159785424 chr1:159785425 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_4717 0 0 0 2 2 exosome 0.438735637118383 0.438718577085499 0 0 hPsi_site_10134 iPseU_CNN:0;iRNA_PseU:0 10135 chr4 44691933 44691933 1 + A G UCEC 44691932 + 44691912 44691952 41 CAAGAATATAATGCTTCTGTTATTTTAACAACCCCTACTGT CAAGAATATAATGCTTCTGTTGTTTTAACAACCCCTACTGT < 41bp 0.891451903320783 0.5550413580385 0.37770882 0.23103487 prediction 0.672821090564566 Functional Loss - GUF1 ENSG00000151806 CDS Human protein_coding chr4:44691932 chr4:44691933 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_4718 0 0 1 0 2 Ribosome 0.438713004734785 0.438718000315938 0 0 hPsi_site_10135 iPseU_CNN:0;iRNA_PseU:0 10136 chr12 120650328 120650328 1 + T C LUAD 120650329 - 120650309 120650349 41 TCGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCAC TCGAGCACGACGGGCAGCCCTGCTGTGAGGTGCACTACCAC < 41bp 0.836402588048155 0.44412204874396 0.40973645 0.23972622 prediction 0.672805176096311 Functional Loss - PXN ENSG00000089159 CDS Human protein_coding chr12:120650329 chr12:120650328 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4719 0 0 0 0 1 Cytosol 0.438541543872084 0.438580435946488 0 0 hPsi_site_10136 iPseU_CNN:0;iRNA_PseU:0 10137 chr15 43891470 43891470 1 + A G UCEC 43891469 + 43891449 43891489 41 CTGTCATCCACACCAAGCATTAACTCCCCATCGCCAGCTGA CTGTCATCCACACCAAGCATTGACTCCCCATCGCCAGCTGA < 41bp 0.887824705923317 0.551426024335517 0.58515173 0.2940455 prediction 0.672797363175599 Functional Loss - CKMT1B ENSG00000237289 CDS Human protein_coding chr15:43891469 chr15:43891470 synonymous SNV . 0 22 hPsi_associated_SNPs_4720 0 0 0 1 0 Cytosol 0.438718588389582 0.438718502025005 0.17030346 0 hPsi_site_10137 iPseU_CNN:0.17030346;iRNA_PseU:0 10138 chr19 42085873 42085873 1 + A G rs2302188 42085872 + 42085852 42085892 41 AAGCTGTCCTGGTTTAACCATATGCTCACCATAGACCCCAT AAGCTGTCCTGGTTTAACCATGTGCTCACCATAGACCCCAT < 41bp 0.836355204474048 0.431999897833779 0.32112044 0.26083314 prediction 0.672710408948096 Functional Loss - CEACAM21 ENSG00000007129 CDS Human protein_coding chr19:42085872 chr19:42085873 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4721 0 0 0 0 0 exosome 0.438718299334355 0.438667094308841 0 0 hPsi_site_10138 iPseU_CNN:0;iRNA_PseU:0 10139 chr17 37825933 37825933 1 + A G COAD 37825932 + 37825912 37825952 41 TTGGTTCAGGCCCCACCGTGTACCAGCTGCTCAGTGCCTGC TTGGTTCAGGCCCCACCGTGTGCCAGCTGCTCAGTGCCTGC < 41bp 0.899124735711407 0.562782402922536 0.78743374 0.2897457 prediction 0.672684665577743 Functional Loss - PNMT ENSG00000141744 CDS Human protein_coding chr17:37825932 chr17:37825933 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_4722 0 0 0 0 1 Cytosol 0.438621311512419 0.43865576081528 0.57486748 0 hPsi_site_10139 iPseU_CNN:0.57486748;iRNA_PseU:0 10140 chr11 5444109 5444109 1 + A G COAD 5444108 + 5444088 5444128 41 TATACACTTATTCTGAAAAATATCTTGGGCACAGCCACCTG TATACACTTATTCTGAAAAATGTCTTGGGCACAGCCACCTG < 41bp 0.836341606784328 0.462189522744751 0.53633064 0.3316362 prediction 0.672683213568656 Functional Loss - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5444108 chr11:5444109 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_4723 0 0 0 0 0 chromatin 0.438718467823616 0.438718151537707 0.0726612799999999 0 hPsi_site_10140 iPseU_CNN:0.0726612799999999;iRNA_PseU:0 10141 chr17 57647932 57647932 1 + A G LUAD 57647931 + 57647911 57647951 41 CAACCACGAAAAGTAGCTGCTATATCAGTTGCTCAGAGAGT CAACCACGAAAAGTAGCTGCTGTATCAGTTGCTCAGAGAGT < 41bp 0.836337343523281 0.434392074162947 0.30663466 0.27158216 prediction 0.672674687046562 Functional Loss - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57647931 chr17:57647932 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4724 0 0 1 0 1 Ribosome 0.43833974118217 0.438218227263855 0 0 hPsi_site_10141 iPseU_CNN:0;iRNA_PseU:0 10142 chr22 45218286 45218286 1 + A G rs16992915 45218285 + 45218265 45218305 41 AGAAAGTCATCTATTTCAACTACCTGAGTGAGCTCCACGAA AGAAAGTCATCTATTTCAACTGCCTGAGTGAGCTCCACGAA < 41bp 0.901319494438073 0.5649857325917 0.670567 0.2708463 prediction 0.672667523692746 Functional Loss - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45218285 chr22:45218286 nonsynonymous SNV 0.015 1 22 hPsi_associated_SNPs_4725 0 0 1 2 2 unknown 0.422906286767463 0.438698740211244 0.341134 0 hPsi_site_10142 iPseU_CNN:0.341134;iRNA_PseU:0 10143 chr9 32634467 32634467 1 + T C rs17219559 32634468 - 32634448 32634488 41 CCTGCCCGACTGTGGTATGATATGCTGGGTGTCTCCGAAGA CCTGCCCGACTGTGGTATGATGTGCTGGGTGTCTCCGAAGA < 41bp 0.884799134709637 0.548466490518523 0.3920211 0.29746115 prediction 0.672665288382227 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634468 chr9:32634467 nonsynonymous SNV 0.914 2 22 hPsi_associated_SNPs_4726 0 0 0 0 0 exosome 0.444379969688919 0.439999881789664 0 0 hPsi_site_10143 iPseU_CNN:0;iRNA_PseU:0 10144 chr22 50280193 50280193 1 + A G UCEC 50280192 + 50280172 50280212 41 CAGCCAGGTCATCCCCATGGTACACATCCTCAACAGGAAGG CAGCCAGGTCATCCCCATGGTGCACATCCTCAACAGGAAGG < 41bp 0.836311290764836 0.442651500868989 0.6978768 0.2715336 prediction 0.672622581529672 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50280192 chr22:50280193 synonymous SNV . 0 22 hPsi_associated_SNPs_4727 0 0 0 0 0 chromatin 0.438709530623621 0.438716388251186 0.3957536 0 hPsi_site_10144 iPseU_CNN:0.3957536;iRNA_PseU:0 10145 chr4 52740525 52740525 1 + A G LUAD 52740524 + 52740504 52740544 41 ACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGAC ACCTGCCTCTGGAGATGATTTGTCTGCCAAGAAAAGTAGAC < 41bp 0.881654597092454 0.545375207828794 0.23471144 0.20879954 prediction 0.672558778527321 Functional Loss - DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52740524 chr4:52740525 synonymous SNV . 0 22 hPsi_associated_SNPs_4728 0 0 1 0 2 Ribosome 0.438652857008113 0.438332242293717 0 0 hPsi_site_10145 iPseU_CNN:0;iRNA_PseU:0 10146 chrX 65414988 65414988 1 + A G LUSC 65414987 + 65414967 65415007 41 ACACCATTCAGGTGGTCTTCTACAACCGTGCCTCCCAGCCA ACACCATTCAGGTGGTCTTCTGCAACCGTGCCTCCCAGCCA < 41bp 0.836268420980627 0.413510604141853 0.42873138 0.31519556 prediction 0.672536841961255 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65414987 chrX:65414988 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_4729 0 0 0 0 2 Nucleus 0.438710075640913 0.438717838330103 0 0 hPsi_site_10146 iPseU_CNN:0;iRNA_PseU:0 10147 chr17 3119566 3119566 1 + A G HNSC 3119565 + 3119545 3119585 41 CTATGCATCATTGTCTCCTATATTCGAGTCTTCTCCACAGT CTATGCATCATTGTCTCCTATGTTCGAGTCTTCTCCACAGT < 41bp 0.871057838141058 0.534801322437861 0.60216594 0.49061227 prediction 0.672513031406395 Functional Loss - OR1A1 ENSG00000172146 CDS Human protein_coding chr17:3119565 chr17:3119566 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4730 0 0 0 0 0 unknown 0.438718535869934 0.438718517428717 0.20433188 0 hPsi_site_10147 iPseU_CNN:0.20433188;iRNA_PseU:0 10148 chr11 57982229 57982229 1 + A G rs1966836 57982228 + 57982208 57982248 41 TGTAGGAATATGAAGACTTTTAGTTCCTTTCTTCAGATCGG TGTAGGAATATGAAGACTTTTGGTTCCTTTCTTCAGATCGG < 41bp 0.836241069685737 0.483270809397447 0.3099253 0.13294968 prediction 0.672482139371475 Functional Loss - OR1S1 ENSG00000172774 CDS Human other chr11:57982228 chr11:57982229 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_4731 0 1 0 0 0 unknown 0.438718592018327 0.438718732327521 0 0 hPsi_site_10148 iPseU_CNN:0;iRNA_PseU:0 10149 chr12 109879472 109879472 1 + A G GBM 109879471 + 109879451 109879491 41 TCAGGGGAAGGAAAGACGGCTACACAGAAAGTTTAAATCAA TCAGGGGAAGGAAAGACGGCTGCACAGAAAGTTTAAATCAA < 41bp 0.836240025053847 0.439508455504366 0.2821998 0.19032842 prediction 0.672480050107694 Functional Loss - MYO1H ENSG00000174527 CDS Human protein_coding chr12:109879471 chr12:109879472 nonsynonymous SNV 0.600 4 22 hPsi_associated_SNPs_4732 0 0 0 0 2 exosome 0.438718595723716 0.438719809347472 0 0 hPsi_site_10149 iPseU_CNN:0;iRNA_PseU:0 10150 chr1 212245479 212245479 1 + A C LUAD 212245478 + 212245458 212245498 41 GACACCAGAACTCTACCTTTTATGTAAAATCCAGCCTTAGT GACACCAGAACTCTACCTTTTCTGTAAAATCCAGCCTTAGT < 41bp 0.86265182252231 0.526437576487587 0.5580115 0.30000967 prediction 0.672428492069447 Functional Loss - DTL ENSG00000143476 CDS Human protein_coding chr1:212245478 chr1:212245479 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4733 0 0 1 0 2 Cytosol 0.438504961573093 0.438617937845951 0.116023 0 hPsi_site_10150 iPseU_CNN:0.116023;iRNA_PseU:0 10151 chr16 2493730 2493730 1 + A G SKCM 2493729 + 2493709 2493749 41 CAGTGAGATCGTCTGCCAGCTATTTCAGGCTTCCCAGGCTG CAGTGAGATCGTCTGCCAGCTGTTTCAGGCTTCCCAGGCTG < 41bp 0.89943714952623 0.56323808482099 0.5773808 0.34771055 prediction 0.67239812941048 Functional Loss - CCNF ENSG00000162063 CDS Human protein_coding chr16:2493729 chr16:2493730 synonymous SNV . 0 22 hPsi_associated_SNPs_4734 0 0 1 0 2 Cytosol 0.438666984114495 0.438844899639814 0.1547616 0 hPsi_site_10151 iPseU_CNN:0.1547616;iRNA_PseU:0 10152 chr1 33960568 33960568 1 + A G rs142427813 33960567 + 33960547 33960587 41 CAAACTCAGGGGAGAAACTTTATGAGTGTTCTGAATGTGGA CAAACTCAGGGGAGAAACTTTGTGAGTGTTCTGAATGTGGA < 41bp 0.836196845197721 0.443025935681768 0.31509954 0.27311283 prediction 0.672393690395442 Functional Loss - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33960567 chr1:33960568 nonsynonymous SNV 0.774 2 22 hPsi_associated_SNPs_4735 0 0 1 0 0 exosome 0.438718781785729 0.438717562987563 0 0 hPsi_site_10152 iPseU_CNN:0;iRNA_PseU:0 10153 chr22 41791990 41791990 1 + A G rs2234062 41791989 + 41791969 41792009 41 TGCCCCCCGCCCGGGCGGGGTACTGCCTGCACCTCAGACCT TGCCCCCCGCCCGGGCGGGGTGCTGCCTGCACCTCAGACCT < 41bp 0.83618763780463 0.466631647220495 0.84482634 0.26524985 prediction 0.67237527560926 Functional Loss - TEF ENSG00000167074 UTR3 Human protein_coding chr22:41791989 chr22:41791990 . . 0 22 hPsi_associated_SNPs_4736 0 0 0 0 0 cytosol 0.4387185929397 0.438718592963148 0.68965268 0 hPsi_site_10153 iPseU_CNN:0.68965268;iRNA_PseU:0 10154 chr10 43288009 43288009 1 + A G rs148911479 43288008 + 43287988 43288028 41 GTGACCGGAAGGTGTCACTTTATGGTTATTTAAGAGGAGCA GTGACCGGAAGGTGTCACTTTGTGGTTATTTAAGAGGAGCA < 41bp 0.836168462749604 0.43741950817932 0.3252485 0.36116657 prediction 0.672336925499208 Functional Loss - BMS1 ENSG00000165733 CDS Human protein_coding chr10:43288008 chr10:43288009 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4737 0 0 1 0 2 chromatin 0.438718593043297 0.438718592818565 0 0 hPsi_site_10154 iPseU_CNN:0;iRNA_PseU:0 10155 chr7 129915016 129915016 1 + A C rs61731658 129915015 + 129914995 129915035 41 ACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGAT ACCGGAGGAGACAAGCCAGCTCTCTGGCTGGATGCTGGGAT < 41bp 0.836156713462322 0.478933887413115 0.7069318 0.3496409 prediction 0.672313426924645 Functional Loss - CPA2 ENSG00000158516 CDS Human protein_coding chr7:129915015 chr7:129915016 nonsynonymous SNV 0.893 1 22 hPsi_associated_SNPs_4738 0 0 0 0 2 exosome 0.438028302634262 0.438721105908459 0.4138636 0 hPsi_site_10155 iPseU_CNN:0.4138636;iRNA_PseU:0 10156 chr19 38633332 38633332 1 + A G GBM 38633331 + 38633311 38633351 41 GTTCGGCCACCTACGTGAGATACAAGCCATCCCCAGAAAGG GTTCGGCCACCTACGTGAGATGCAAGCCATCCCCAGAAAGG < 41bp 0.836143168937799 0.444743332412555 0.6254145 0.32583538 prediction 0.672286337875598 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38633331 chr19:38633332 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4739 0 0 0 0 1 Ribosome 0.438716238359753 0.438716509341071 0.250829 0 hPsi_site_10156 iPseU_CNN:0.250829;iRNA_PseU:0 10157 chr14 60749649 60749649 1 + A G rs117800726 60749648 + 60749628 60749668 41 ATACTGCTGTGAGCATTTGTTAGATCACATCACCAATAACC ATACTGCTGTGAGCATTTGTTGGATCACATCACCAATAACC < 41bp 0.836131469507932 0.446069499059438 0.32569936 0.1990929 prediction 0.672262939015864 Functional Loss - PPM1A ENSG00000100614 CDS Human protein_coding chr14:60749648 chr14:60749649 synonymous SNV . 0 22 hPsi_associated_SNPs_4740 0 0 1 0 0 nucleoplasm 0.438740136973698 0.438719824125657 0 0 hPsi_site_10157 iPseU_CNN:0;iRNA_PseU:0 10158 chr1 22913087 22913087 1 + A G UCEC 22913086 + 22913066 22913106 41 CCTGCCACTGTGACCTCAGCTACTACCGTGCAGCCCTGGAC CCTGCCACTGTGACCTCAGCTGCTACCGTGCAGCCCTGGAC < 41bp 0.836118815691709 0.42894762391896 0.17718062 0.1267975 prediction 0.672237631383419 Functional Loss - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22913086 chr1:22913087 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4741 0 0 0 0 1 exosome 0.438718593229289 0.438718594275876 0 0 hPsi_site_10158 iPseU_CNN:0;iRNA_PseU:0 10159 chr19 49376683 49376683 1 + A G rs45533432 49376682 + 49376662 49376702 41 GCTGGCCTGGAGGGAGAAGCTAGGACTCCTCTGGCAATCCC GCTGGCCTGGAGGGAGAAGCTGGGACTCCTCTGGCAATCCC < 41bp 0.836074158051844 0.439707008416278 0.37061596 0.21864319 prediction 0.672148316103688 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376682 chr19:49376683 nonsynonymous SNV 0.036 1 22 hPsi_associated_SNPs_4742 0 0 1 0 0 Cytosol 0.43871859273438 0.438718784635188 0 0 hPsi_site_10159 iPseU_CNN:0;iRNA_PseU:0 10160 chr6 43970858 43970858 1 + A G rs114544123 43970857 + 43970837 43970877 41 GGCGCTGGGCCAACGCGCCGTAATTAAGACGCCGCTCCCCG GGCGCTGGGCCAACGCGCCGTGATTAAGACGCCGCTCCCCG < 41bp 0.836073663991604 0.448380444981707 0.8956339 0.36073932 prediction 0.672147327983207 Functional Loss - C6orf223 ENSG00000181577 CDS Human protein_coding chr6:43970857 chr6:43970858 nonsynonymous SNV 0.011 3 22 hPsi_associated_SNPs_4743 0 0 0 0 0 nucleus 0.438700057615288 0.438751069649995 0.7912678 0 hPsi_site_10160 iPseU_CNN:0.7912678;iRNA_PseU:0 10161 chr21 38098559 38098559 1 + A G UCEC 38098558 + 38098538 38098578 41 CCATCACCGAGATCAAGCTGTACAGTAACATGTTCATGTTC CCATCACCGAGATCAAGCTGTGCAGTAACATGTTCATGTTC < 41bp 0.836069014184945 0.418613880185219 0.9439633 0.54083055 prediction 0.67213802836989 Functional Loss - SIM2 ENSG00000159263 CDS Human protein_coding chr21:38098558 chr21:38098559 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_4744 0 0 0 0 1 nucleus 0.438721833973154 0.438714482040739 0.8062655 0 hPsi_site_10161 iPseU_CNN:0.8062655;iRNA_PseU:0 10162 chr9 27192504 27192504 1 + A G rs200574110 27192503 + 27192483 27192523 41 TCAGTGACAAATGAGATTGTTACACTCAACTATTTGGAACC TCAGTGACAAATGAGATTGTTGCACTCAACTATTTGGAACC < 41bp 0.836057780701928 0.431098385002442 0.8367263 0.6384921 prediction 0.672115561403856 Functional Loss - TEK ENSG00000120156 CDS Human protein_coding chr9:27192503 chr9:27192504 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_4745 0 0 0 0 1 nucleoplasm 0.43912392030508 0.438729138073852 0.3964684 0 hPsi_site_10162 iPseU_CNN:0.3964684;iRNA_PseU:0 10163 chr11 67049920 67049920 1 + A G PAAD 67049919 + 67049899 67049939 41 CCCACAGGGGCACCCACGGGTACATGGCTCCGGAGGTCCTG CCCACAGGGGCACCCACGGGTGCATGGCTCCGGAGGTCCTG < 41bp 0.896525702114576 0.560476511729135 0.67256945 0.2840885 prediction 0.672098380770882 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67049919 chr11:67049920 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4746 0 0 1 0 2 chromatin 0.43871859353387 0.438718592995103 0.3451389 0 hPsi_site_10163 iPseU_CNN:0.3451389;iRNA_PseU:0 10164 chr2 62449512 62449512 1 + A G COAD 62449511 + 62449491 62449531 41 GAGAAGTTCTGGAAGATATCTACCCCTCCCGAGGCATACTG GAGAAGTTCTGGAAGATATCTGCCCCTCCCGAGGCATACTG < 41bp 0.836009908862894 0.451386697132491 0.3141064 0.19425207 prediction 0.672019817725787 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449511 chr2:62449512 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_4747 0 0 1 0 0 Ribosome 0.438718594111074 0.438718593190712 0 0 hPsi_site_10164 iPseU_CNN:0;iRNA_PseU:0 10165 chr19 33795885 33795885 1 + A G rs77499740 33795884 + 33795864 33795904 41 GTGTCCCTGCCCCAAATTCCTATGTTGAAGGCCTAACCCCC GTGTCCCTGCCCCAAATTCCTGTGTTGAAGGCCTAACCCCC < 41bp 0.863880670335999 0.527938521530905 0.25963953 0.25937188 prediction 0.671884297610187 Functional Loss - CEBPA-AS1 ENSG00000267296 ncRNA_exonic Human antisense chr19:33795884 chr19:33795885 . . 0 22 hPsi_associated_SNPs_4748 0 0 0 0 0 unknown 0.4387185929951 0.438718592995961 0 0 hPsi_site_10165 iPseU_CNN:0;iRNA_PseU:0 10166 chr14 20710974 20710974 1 + A G LIHC 20710973 + 20710953 20710993 41 GTCTTTCTTCTTTGTAGACTTAAGACCCATGAACAGGTCAG GTCTTTCTTCTTTGTAGACTTGAGACCCATGAACAGGTCAG < 41bp 0.856236144980805 0.520311266870226 0.6560543 0.45608595 prediction 0.671849756221158 Functional Loss - OR11H4 ENSG00000176198 CDS Human protein_coding chr14:20710973 chr14:20710974 synonymous SNV . 0 22 hPsi_associated_SNPs_4749 0 0 0 0 0 unknown 0.438718504744272 0.438730799415549 0.3121086 0 hPsi_site_10166 iPseU_CNN:0.3121086;iRNA_PseU:0 10167 chr5 228334 228334 1 + A G COAD 228333 + 228313 228353 41 ATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTG ATACCAGCTATTTTGTGGAGTGTTTTGCCTTGGATCTCCTG < 41bp 0.835905732934654 0.425978259967854 0.32953936 0.25942004 prediction 0.671811465869308 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:228333 chr5:228334 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_4750 0 0 1 0 0 Nucleus 0.438718596473847 0.438718616479801 0 0 hPsi_site_10167 iPseU_CNN:0;iRNA_PseU:0 10168 chr7 76126767 76126767 1 + A G LUSC 76126766 + 76126746 76126786 41 TCCAAAAGTCACGGCTCAGTTAAGAGATTGAGGAAAATGTC TCCAAAAGTCACGGCTCAGTTGAGAGATTGAGGAAAATGTC < 41bp 0.835893003200018 0.434979629875203 0.33560297 0.2407516 prediction 0.671786006400037 Functional Loss - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76126766 chr7:76126767 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4751 0 0 0 0 1 Nucleus 0.438747948546024 0.493796805427288 0 0 hPsi_site_10168 iPseU_CNN:0;iRNA_PseU:0 10169 chr2 132276220 132276220 1 + A G rs368675695 132276219 + 132276199 132276239 41 TCAAGGTGAAGAGCCACGTCTACAGCCTGGAGGGCCAGGAC TCAAGGTGAAGAGCCACGTCTGCAGCCTGGAGGGCCAGGAC < 41bp 0.884366457572403 0.548473562670525 0.5448929 0.45696363 prediction 0.671785789803755 Functional Loss - LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132276219 chr2:132276220 . . 0 22 hPsi_associated_SNPs_4752 0 0 1 0 1 unknown 0.438718533676328 0.438718368960987 0.0897858 0 hPsi_site_10169 iPseU_CNN:0.0897858;iRNA_PseU:0 10170 chr11 64695605 64695605 1 + A G COAD 64695604 + 64695584 64695624 41 AGCCCTCCGTGGCCAAGAGATATGTGGATCAAAAGTTTGTC AGCCCTCCGTGGCCAAGAGATGTGTGGATCAAAAGTTTGTC < 41bp 0.898638087416321 0.562749058267226 0.5049244 0.23571527 prediction 0.67177805829819 Functional Loss - PPP2R5B ENSG00000068971 CDS Human protein_coding chr11:64695604 chr11:64695605 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_4753 0 0 0 0 2 Ribosome 0.438718593802456 0.438718593478948 0.0098488000000001 0 hPsi_site_10170 iPseU_CNN:0.0098488000000001;iRNA_PseU:0 10171 chr19 16338417 16338417 1 + A G rs560386574 16338416 + 16338396 16338436 41 GTTCCACCAGTGTGTGCGGCTATCACGCTTCGAGAATGACC GTTCCACCAGTGTGTGCGGCTGTCACGCTTCGAGAATGACC < 41bp 0.900470927756745 0.564583670555398 0.69791144 0.22503662 prediction 0.671774514402692 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338416 chr19:16338417 synonymous SNV . 0 22 hPsi_associated_SNPs_4754 0 0 1 0 2 Ribosome 0.438754138714856 0.438739195413346 0.39582288 0 hPsi_site_10171 iPseU_CNN:0.39582288;iRNA_PseU:0 10172 chr8 94935594 94935594 1 + A G UCEC 94935593 + 94935573 94935613 41 TGGTTAGGATTGTGGGTGAGTACCTAACTGGCATGCATCAC TGGTTAGGATTGTGGGTGAGTGCCTAACTGGCATGCATCAC < 41bp 0.835870610506363 0.444528482042343 0.86817074 0.3503941 prediction 0.671741221012726 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935593 chr8:94935594 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4755 0 0 1 0 0 Ribosome 0.438718729614002 0.438718630988124 0.73634148 0 hPsi_site_10172 iPseU_CNN:0.73634148;iRNA_PseU:0 10173 chr8 23431407 23431407 1 + A G rs3174040 23431406 + 23431386 23431426 41 GAAAGCCGTAAAGTCCACGCTACTGTTGAAAATGTTTACAT GAAAGCCGTAAAGTCCACGCTGCTGTTGAAAATGTTTACAT < 41bp 0.870385723306938 0.534518068286424 0.36231226 0.25034538 prediction 0.671735310041028 Functional Loss - SLC25A37 ENSG00000215298 CDS Human other chr8:23431406 chr8:23431407 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4756 0 0 0 0 0 Ribosome 0.43876248536833 0.438389365880311 0 0 hPsi_site_10173 iPseU_CNN:0;iRNA_PseU:0 10174 chr12 48866732 48866732 1 + A G LUAD 48866731 + 48866711 48866751 41 AAACCTCATACATCTAAATTTAAGTGGCAACAAAATTAAAG AAACCTCATACATCTAAATTTGAGTGGCAACAAAATTAAAG < 41bp 0.850185168876318 0.51433303442879 0.7207608 0.31411308 prediction 0.671704268895055 Functional Loss - ANP32D ENSG00000139223 CDS Human protein_coding chr12:48866731 chr12:48866732 synonymous SNV . 0 22 hPsi_associated_SNPs_4757 0 0 0 0 0 unknown 0.438629994184912 0.438637136376603 0.4415216 0 hPsi_site_10174 iPseU_CNN:0.4415216;iRNA_PseU:0 10175 chr11 6231118 6231118 1 + A G STAD 6231117 + 6231097 6231137 41 TGGGCCCAATGCAGTAGCAGTACCTTTCCTGTCAGATGCAG TGGGCCCAATGCAGTAGCAGTGCCTTTCCTGTCAGATGCAG < 41bp 0.889279717314671 0.553433285645938 0.7115495 0.32413015 prediction 0.671692863337466 Functional Loss - C11orf42 ENSG00000180878 CDS Human protein_coding chr11:6231117 chr11:6231118 synonymous SNV . 0 22 hPsi_associated_SNPs_4758 0 0 0 0 1 exosome 0.438718580928897 0.438718592581642 0.423099 0 hPsi_site_10175 iPseU_CNN:0.423099;iRNA_PseU:0 10176 chr20 4680519 4680519 1 + A G UCEC 4680518 + 4680498 4680538 41 AGCAGATGTGTATCACCCAGTACGAGAGGGAATCTCAGGCC AGCAGATGTGTATCACCCAGTGCGAGAGGGAATCTCAGGCC < 41bp 0.896523765815711 0.56072024926242 0.7334935 0.23243678 prediction 0.671607033106581 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680518 chr20:4680519 nonsynonymous SNV 0.950 5 22 hPsi_associated_SNPs_4759 0 0 1 0 0 Ribosome 0.438718347947877 0.438718433132922 0.466987 0 hPsi_site_10176 iPseU_CNN:0.466987;iRNA_PseU:0 10177 chr13 32527178 32527178 1 + A G STAD 32527177 + 32527157 32527197 41 AGGCAACACAGCTGCGGCATTACCAATGAGGAGCGGCTGCA AGGCAACACAGCTGCGGCATTGCCAATGAGGAGCGGCTGCA < 41bp 0.835782576243721 0.464991468716063 0.2700781 0.19993797 prediction 0.671565152487442 Functional Loss - EEF1DP3 ENSG00000229715 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr13:32527177 chr13:32527178 . . 0 22 hPsi_associated_SNPs_4760 0 0 0 0 0 unknown 0.438204173651351 0.439882792152207 0 0 hPsi_site_10177 iPseU_CNN:0;iRNA_PseU:0 10178 chr11 113234588 113234588 1 + A G LIHC 113234587 + 113234567 113234607 41 ATCACGTTATGCTATAAAGATACTAGCTATCTGCACGAATA ATCACGTTATGCTATAAAGATGCTAGCTATCTGCACGAATA < 41bp 0.835762421885057 0.436270582104235 0.38021785 0.24706262 prediction 0.671524843770115 Functional Loss - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113234587 chr11:113234588 nonsynonymous SNV 0.894 0 22 hPsi_associated_SNPs_4761 0 0 0 0 2 cytosol 0.437823912412925 0.436030252834805 0 0 hPsi_site_10178 iPseU_CNN:0;iRNA_PseU:0 10179 chr22 31322487 31322487 1 + A G rs140189544 31322486 + 31322466 31322506 41 GAGCTGAAATGGCTCCGGCTTAGCAACCCAGTATGGCCAAA GAGCTGAAATGGCTCCGGCTTGGCAACCCAGTATGGCCAAA < 41bp 0.86684556873362 0.531091953328746 0.34681547 0.23753715 prediction 0.671507230809748 Functional Loss - MORC2-AS1 ENSG00000235989 ncRNA_exonic Human antisense chr22:31322486 chr22:31322487 . . 0 22 hPsi_associated_SNPs_4762 0 0 0 0 0 unknown 0.438718593015092 0.43871859301554 0 0 hPsi_site_10179 iPseU_CNN:0;iRNA_PseU:0 10180 chr7 44240763 44240763 1 + A G rs150272603 44240762 + 44240742 44240782 41 TGTACAGCCTCAGCGTCCTCTACAAAGGCGAGGCCAAGGTG TGTACAGCCTCAGCGTCCTCTGCAAAGGCGAGGCCAAGGTG < 41bp 0.882290233261978 0.54654096950515 0.43710855 0.323278 prediction 0.671498527513657 Functional Loss - YKT6 ENSG00000106636 CDS Human protein_coding chr7:44240762 chr7:44240763 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_4763 0 0 1 0 1 Ribosome 0.43871644993819 0.438697643221583 0 0 hPsi_site_10180 iPseU_CNN:0;iRNA_PseU:0 10181 chr8 92352712 92352712 1 + A G LUAD 92352711 + 92352691 92352731 41 TCGGAGTGGCACTTGTAGGCTATGTGGCCTCACTGGCTCTT TCGGAGTGGCACTTGTAGGCTGTGTGGCCTCACTGGCTCTT < 41bp 0.835718877476669 0.435490619776547 0.65550625 0.51135325 prediction 0.671437754953339 Functional Loss - SLC26A7 ENSG00000147606 CDS Human protein_coding chr8:92352711 chr8:92352712 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4764 0 0 0 0 2 membrane 0.43870737861119 0.438472925832127 0.288306 0 hPsi_site_10181 iPseU_CNN:0.288306;iRNA_PseU:0 10182 chr17 64880717 64880717 1 + A G LUSC 64880716 + 64880696 64880736 41 GGACCAAGGATGCAGAGACCTACTTCAACTACAAGTATGGG GGACCAAGGATGCAGAGACCTGCTTCAACTACAAGTATGGG < 41bp 0.83569950893719 0.424075622516192 0.6430023 0.20512983 prediction 0.67139901787438 Functional Loss - CACNG5 ENSG00000075429 CDS Human protein_coding chr17:64880716 chr17:64880717 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4765 0 0 0 0 1 unknown 0.438718537383039 0.438712791047235 0.2860046 0 hPsi_site_10182 iPseU_CNN:0.2860046;iRNA_PseU:0 not specified not specified 10183 chr5 131721174 131721174 1 + A G rs274558 131721173 + 131721153 131721193 41 GCTGACGATGCCGGGGGTGCTATGCGTGGCACTCTGGTGGT GCTGACGATGCCGGGGGTGCTGTGCGTGGCACTCTGGTGGT < 41bp 0.835663434613706 0.418924993587008 0.6504506 0.27592117 prediction 0.671326869227412 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131721173 chr5:131721174 synonymous SNV . 0 22 hPsi_associated_SNPs_4766 3 0 0 0 1 chromatin 0.438799863485401 0.438694650732676 0.3009012 0 hPsi_site_10183 iPseU_CNN:0.3009012;iRNA_PseU:0 10184 chr17 48741058 48741058 1 + A G BLCA 48741057 + 48741037 48741077 41 CACAGCATCCTGATCAGGTTTATCTCCAACCCCATGGCCCC CACAGCATCCTGATCAGGTTTGTCTCCAACCCCATGGCCCC < 41bp 0.835652781854698 0.423994076513196 0.8364873 0.75733435 prediction 0.671305563709397 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48741057 chr17:48741058 nonsynonymous SNV 0.332 1 22 hPsi_associated_SNPs_4767 0 0 1 0 1 Endoplasmic reticulum 0.438718593148843 0.43871859328778 0.1583059 0 hPsi_site_10184 iPseU_CNN:0.1583059;iRNA_PseU:0 10185 chr15 90904189 90904189 1 + A C UCEC 90904188 + 90904168 90904208 41 CACACAGGTGAGAGACCTTTTAAGTGCGAAAACTGTGGGAA CACACAGGTGAGAGACCTTTTCAGTGCGAAAACTGTGGGAA < 41bp 0.858938620967599 0.523336182337433 0.4256212 0.32205003 prediction 0.671204877260332 Functional Loss - ZNF774 ENSG00000196391 CDS Human protein_coding chr15:90904188 chr15:90904189 nonsynonymous SNV 0.145 1 22 hPsi_associated_SNPs_4768 0 0 0 0 0 nucleoplasm 0.441243197611264 0.440972848600732 0 0 hPsi_site_10185 iPseU_CNN:0;iRNA_PseU:0 10186 chr2 219000517 219000517 1 + A G COAD 219000516 + 219000496 219000536 41 ACTCCTCAAGATTCTAGCTATACATGGCTTGATCAGCAAGG ACTCCTCAAGATTCTAGCTATGCATGGCTTGATCAGCAAGG < 41bp 0.835585273115866 0.434833906479683 0.6565947 0.31903148 prediction 0.671170546231732 Functional Loss - CXCR2 ENSG00000180871 CDS Human protein_coding chr2:219000516 chr2:219000517 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4769 0 0 0 0 0 exosome 0.438721252825908 0.438721881073379 0.3131894 0 hPsi_site_10186 iPseU_CNN:0.3131894;iRNA_PseU:0 10187 chr19 20003109 20003109 1 + A G rs8106559 20003108 + 20003088 20003128 41 ATGTGGCAAAGCCTTTCACCTATCCTCACACCTTACTACAC ATGTGGCAAAGCCTTTCACCTGTCCTCACACCTTACTACAC < 41bp 0.835573736936233 0.441225744017623 0.8154061 0.29099494 prediction 0.671147473872466 Functional Loss - ZNF253 ENSG00000256771 CDS Human protein_coding chr19:20003108 chr19:20003109 synonymous SNV . 0 22 hPsi_associated_SNPs_4770 0 0 0 0 0 chromatin 0.438718593506727 0.438718622283229 0.6308122 0 hPsi_site_10187 iPseU_CNN:0.6308122;iRNA_PseU:0 10188 chrX 79286086 79286086 1 + A C UCEC 79286085 + 79286065 79286105 41 TCTCCACTTTGCTTTTCACCTATGTTTCATTTACCTACAAG TCTCCACTTTGCTTTTCACCTCTGTTTCATTTACCTACAAG < 41bp 0.849021511705139 0.513489016796042 0.2928809 0.27451232 prediction 0.671064989818195 Functional Loss - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79286085 chrX:79286086 nonsynonymous SNV 0.812 0 22 hPsi_associated_SNPs_4771 0 0 0 0 1 unknown 0.438732622296181 0.438655456405547 0 0 hPsi_site_10188 iPseU_CNN:0;iRNA_PseU:0 10189 chr1 244538715 244538715 1 + A G COAD 244538714 + 244538694 244538734 41 GAAGAGACGTTCAAGGCTATTACCCTGGGCAGCTGGCAAGA GAAGAGACGTTCAAGGCTATTGCCCTGGGCAGCTGGCAAGA < 41bp 0.835474590688953 0.427549319054143 0.32975462 0.12885725 prediction 0.670949181377906 Functional Loss - C1orf100 ENSG00000173728 CDS Human protein_coding chr1:244538714 chr1:244538715 nonsynonymous SNV 0.709 2 22 hPsi_associated_SNPs_4772 0 0 1 0 2 unknown 0.438722220890514 0.438719420069609 0 0 hPsi_site_10189 iPseU_CNN:0;iRNA_PseU:0 10190 chr8 11163732 11163732 1 + A C GBM 11163731 + 11163711 11163751 41 AGTGGTCAGCCACTCACTGGTACAAACGGGAGGAGGTGCAA AGTGGTCAGCCACTCACTGGTCCAAACGGGAGGAGGTGCAA < 41bp 0.835465962411284 0.483201550443784 0.71712685 0.27311486 prediction 0.670931924822568 Functional Loss - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11163731 chr8:11163732 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_4773 0 0 1 0 1 Ribosome 0.438993045918075 0.438718593058793 0.4342537 0 hPsi_site_10190 iPseU_CNN:0.4342537;iRNA_PseU:0 10191 chr17 40845329 40845329 1 + A G BLCA 40845328 + 40845308 40845348 41 TTCCCAGGATCTGCAGAGCTTAAGAGACGCCCCTTTGTGGG TTCCCAGGATCTGCAGAGCTTGAGAGACGCCCCTTTGTGGG < 41bp 0.835462848946472 0.417775002089264 0.41652232 0.31482863 prediction 0.670925697892944 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40845328 chr17:40845329 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4774 0 0 0 0 1 Cytosol 0.438679336803412 0.438718552937149 0 0 hPsi_site_10191 iPseU_CNN:0;iRNA_PseU:0 10192 chrX 41586609 41586609 1 + A C OV 41586608 + 41586588 41586628 41 GTTTGTCAGTCTCTTAATTTTAAGTTGGATTGCCATAAGCC GTTTGTCAGTCTCTTAATTTTCAGTTGGATTGCCATAAGCC < 41bp 0.835442839186315 0.499488622939903 0.43561336 0.27773517 prediction 0.67088567837263 Functional Loss - GPR82 ENSG00000171657 CDS Human protein_coding chrX:41586608 chrX:41586609 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_4775 0 0 0 0 0 nucleus 0.43912078363464 0.439772828977021 0 0 hPsi_site_10192 iPseU_CNN:0;iRNA_PseU:0 10193 chr12 13154999 13154999 1 + A G UCEC 13154998 + 13154978 13155018 41 GGATCATGAAGCCTCTCACGTACCCTATGAGGCAGAAGGGG GGATCATGAAGCCTCTCACGTGCCCTATGAGGCAGAAGGGG < 41bp 0.867504775368666 0.532066691426486 0.612622 0.2397832 prediction 0.67087616788436 Functional Loss - HTR7P1 ENSG00000183935 ncRNA_exonic Human transcribed_processed_pseudogene chr12:13154998 chr12:13154999 . . 0 22 hPsi_associated_SNPs_4776 0 0 0 0 0 unknown 0.438711999111488 0.438718567859468 0.225244 0 hPsi_site_10193 iPseU_CNN:0.225244;iRNA_PseU:0 10194 chr1 12082926 12082926 1 + A G rs2295283 12082925 + 12082905 12082945 41 TCTGAGGAGTCTGCAGTTCCTAAGAGGAGCTGGCGCCTCAG TCTGAGGAGTCTGCAGTTCCTGAGAGGAGCTGGCGCCTCAG < 41bp 0.835417853044875 0.441535503129288 0.32887447 0.16357672 prediction 0.670835706089751 Functional Loss - MIIP ENSG00000116691 CDS Human protein_coding chr1:12082925 chr1:12082926 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_4777 0 0 1 0 2 chromatin 0.438718592453123 0.43871859298346 0 0 hPsi_site_10194 iPseU_CNN:0;iRNA_PseU:0 10195 chr3 31663669 31663669 1 + A G UCEC 31663668 + 31663648 31663688 41 ACTTTGACTCCAGTCGTGTGTATGCTGTCTGCAATTGCCTT ACTTTGACTCCAGTCGTGTGTGTGCTGTCTGCAATTGCCTT < 41bp 0.835407925623637 0.429795047351577 0.29270917 0.26213333 prediction 0.670815851247275 Functional Loss - STT3B ENSG00000163527 CDS Human protein_coding chr3:31663668 chr3:31663669 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_4778 0 0 1 0 1 Nucleus 0.458750479862512 0.41684711172316 0 0 hPsi_site_10195 iPseU_CNN:0;iRNA_PseU:0 10196 chr4 7780595 7780595 1 + A G OV 7780594 + 7780574 7780614 41 AGACGCCACGGGGGGCTTTTTACCCTTGAGCTGTTGAAATA AGACGCCACGGGGGGCTTTTTGCCCTTGAGCTGTTGAAATA < 41bp 0.835371772883761 0.463267088677412 0.1989499 0.16747671 prediction 0.670743545767523 Functional Loss - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7780594 chr4:7780595 synonymous SNV . 0 22 hPsi_associated_SNPs_4779 0 0 0 0 0 Ribosome 0.438808141170038 0.441649044759551 0 0 hPsi_site_10196 iPseU_CNN:0;iRNA_PseU:0 10197 chr10 12279173 12279173 1 + A G OV 12279172 + 12279152 12279192 41 AAAGAGACTACACACAATACTATGATCATATTTCTAAACAA AAAGAGACTACACACAATACTGTGATCATATTTCTAAACAA < 41bp 0.835369149389172 0.451900220000374 0.28846622 0.24580008 prediction 0.670738298778344 Functional Loss - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12279172 chr10:12279173 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4780 0 0 1 0 2 Ribosome 0.436704756528882 0.438441584928092 0 0 hPsi_site_10197 iPseU_CNN:0;iRNA_PseU:0 10198 chr5 102509634 102509634 1 + A G STAD 102509633 + 102509613 102509653 41 TTTTACCAGTGAAAGTCATGTACATTCTTTGCTGTCTATTC TTTTACCAGTGAAAGTCATGTGCATTCTTTGCTGTCTATTC < 41bp 0.835337538446428 0.454886739980545 0.6348091 0.3287133 prediction 0.670675076892857 Functional Loss - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102509633 chr5:102509634 synonymous SNV . 0 22 hPsi_associated_SNPs_4781 0 0 1 0 2 Cytosol 0.428699631920675 0.439525831383897 0.2696182 0 hPsi_site_10198 iPseU_CNN:0.2696182;iRNA_PseU:0 10199 chr19 10738451 10738451 1 + A C DLBC 10738450 + 10738430 10738470 41 TGCTCCTGGCCATTGTGGGCTACGTGGCTGTAGGCATCATA TGCTCCTGGCCATTGTGGGCTCCGTGGCTGTAGGCATCATA < 41bp 0.864527720577154 0.529195221056735 0.49381754 0.26201707 prediction 0.670664999040837 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10738450 chr19:10738451 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4782 0 0 1 0 2 Ribosome 0.438717563114323 0.438925031871047 0 0 hPsi_site_10199 iPseU_CNN:0;iRNA_PseU:0 10200 chr7 142460335 142460335 1 + A G rs201550522 142460334 + 142460314 142460354 41 GCTCCTGTGCTGAGCCAGGCTAAGTGTGAAGCCTCCTACCC GCTCCTGTGCTGAGCCAGGCTGAGTGTGAAGCCTCCTACCC < 41bp 0.835308431925976 0.438797284728852 0.4047309 0.23998848 prediction 0.670616863851952 Functional Loss - PRSS1 ENSG00000204983 CDS Human protein_coding chr7:142460334 chr7:142460335 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4783 0 0 0 0 2 Cytosol 0.438718593083325 0.438718592396181 0 0 hPsi_site_10200 iPseU_CNN:0;iRNA_PseU:0 10201 chr3 47037855 47037855 1 + A G UCEC 47037854 + 47037834 47037874 41 CAGTCCCCGCCACCCTGGCCTACACTCACCCCGCCCTCACC CAGTCCCCGCCACCCTGGCCTGCACTCACCCCGCCCTCACC < 41bp 0.835300259004295 0.442992330657021 0.749299 0.35416356 prediction 0.670600518008589 Functional Loss - NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47037854 chr3:47037855 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_4784 0 0 1 0 1 Nucleus 0.438718592993721 0.438718592995094 0.498598 0 hPsi_site_10201 iPseU_CNN:0.498598;iRNA_PseU:0 10202 chr12 4848429 4848429 1 + A G rs115397261 4848428 + 4848408 4848448 41 ATACAACGGGCCATCACCAGTATCATCAACCGGACGCCCTC ATACAACGGGCCATCACCAGTGTCATCAACCGGACGCCCTC < 41bp 0.899548719378767 0.564255982206694 0.5363548 0.33326393 prediction 0.670585474344146 Functional Loss - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4848428 chr12:4848429 nonsynonymous SNV 0.193 0 22 hPsi_associated_SNPs_4785 0 0 0 0 1 cytosol 0.438717634805204 0.438718381168404 0.0727096 0 hPsi_site_10202 iPseU_CNN:0.0727096;iRNA_PseU:0 10203 chr8 37556185 37556185 1 + A G SKCM 37556184 + 37556164 37556204 41 CTTCAGCCTCGGCGCTGGGATACCAGTAACTACAGCTCTTC CTTCAGCCTCGGCGCTGGGATGCCAGTAACTACAGCTCTTC < 41bp 0.868101059726197 0.532867003641964 0.26901245 0.21607527 prediction 0.670468112168467 Functional Loss - ZNF703 ENSG00000183779 CDS Human protein_coding chr8:37556184 chr8:37556185 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4786 0 0 1 0 0 exosome 0.438718571235396 0.438718719277198 0 0 hPsi_site_10203 iPseU_CNN:0;iRNA_PseU:0 10204 chr14 89337958 89337958 1 + A G LUAD 89337957 + 89337937 89337977 41 ATCTGGGGCTGTGTTGCTTCTATGCCCAGCAGTATGATATG ATCTGGGGCTGTGTTGCTTCTGTGCCCAGCAGTATGATATG < 41bp 0.898797647090039 0.563615975439288 0.38922867 0.26008123 prediction 0.670363343301501 Functional Loss - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89337957 chr14:89337958 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4787 0 0 1 0 1 Nucleus 0.438725054616348 0.43871946525788 0 0 hPsi_site_10204 iPseU_CNN:0;iRNA_PseU:0 10205 chr12 55945856 55945856 1 + A G rs57386660 55945855 + 55945835 55945875 41 CATTACTTCGGTTACTCCCTTACTGAATCCCTTCATATATA CATTACTTCGGTTACTCCCTTGCTGAATCCCTTCATATATA < 41bp 0.83515766346742 0.469886765772117 0.68739825 0.32865995 prediction 0.67031532693484 Functional Loss - OR6C4 ENSG00000179626 CDS Human protein_coding chr12:55945855 chr12:55945856 synonymous SNV . 0 22 hPsi_associated_SNPs_4788 0 0 0 0 0 unknown 0.438718604665684 0.438718598018251 0.3747965 0 hPsi_site_10205 iPseU_CNN:0.3747965;iRNA_PseU:0 10206 chr1 12853483 12853483 1 + A G LUSC 12853482 + 12853462 12853502 41 AGGAGCTGCCCAGGGTGCTCTATCTCCCACTCTTCATGGAG AGGAGCTGCCCAGGGTGCTCTGTCTCCCACTCTTCATGGAG < 41bp 0.835095303571667 0.432569728429421 0.6396288 0.3766721 prediction 0.670190607143333 Functional Loss - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12853482 chr1:12853483 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_4789 0 0 0 0 0 unknown 0.438718588422165 0.438718363306714 0.2792576 0 hPsi_site_10206 iPseU_CNN:0.2792576;iRNA_PseU:0 10207 chr2 33042570 33042570 1 + A G UCEC 33042569 + 33042549 33042589 41 ATCCAGTTCCCAAGAAGCTGTACAAATGCTTTCTTCTGTTC ATCCAGTTCCCAAGAAGCTGTGCAAATGCTTTCTTCTGTTC < 41bp 0.835086481505489 0.435570660652188 0.44340163 0.2712063 prediction 0.670172963010979 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33042569 chr2:33042570 synonymous SNV . 0 22 hPsi_associated_SNPs_4790 0 0 1 0 2 Nucleus 0.438927526400784 0.438812556284927 0 0 hPsi_site_10207 iPseU_CNN:0;iRNA_PseU:0 10208 chr19 57889176 57889176 1 + A G SKCM 57889175 + 57889155 57889195 41 AGTGAATGTGGGAAGTTCTTTAAGTGCAACTCAAACCTCTT AGTGAATGTGGGAAGTTCTTTGAGTGCAACTCAAACCTCTT < 41bp 0.883879550390449 0.548817200817348 0.8709769 0.3174542 prediction 0.670124699146202 Functional Loss - ZNF547 ENSG00000152433 CDS Human protein_coding chr19:57889175 chr19:57889176 nonsynonymous SNV 0.053 0 22 hPsi_associated_SNPs_4791 0 0 0 0 0 exosome 0.438722631199489 0.438718903236868 0.7419538 0 hPsi_site_10208 iPseU_CNN:0.7419538;iRNA_PseU:0 10209 chr15 51973991 51973991 1 + A G LUSC 51973990 + 51973970 51974010 41 CGGCACTTGGATTCTGGTGTTAGTGCTCCCGATTCAAGCTT CGGCACTTGGATTCTGGTGTTGGTGCTCCCGATTCAAGCTT < 41bp 0.835042704866959 0.441345150128204 0.7767966 0.47101325 prediction 0.670085409733918 Functional Loss - SCG3 ENSG00000104112 CDS Human protein_coding chr15:51973990 chr15:51973991 synonymous SNV . 0 22 hPsi_associated_SNPs_4792 0 0 1 0 1 nucleolus 0.43871878114052 0.438304895976246 0.5535932 0 hPsi_site_10209 iPseU_CNN:0.5535932;iRNA_PseU:0 10210 chr7 100486224 100486224 1 + A G rs202030567 100486223 + 100486203 100486243 41 ATACTTGTACTACCTTGTCCTATGAAGCTCTGAGAATTTTT ATACTTGTACTACCTTGTCCTGTGAAGCTCTGAGAATTTTT < 41bp 0.835030238044644 0.464991766062595 0.2638966 0.23265845 prediction 0.670060476089288 Functional Loss - SRRT ENSG00000087087 CDS Human protein_coding chr7:100486223 chr7:100486224 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4793 0 0 1 0 0 Nucleus 0.438715684719566 0.438723255195746 0 0 hPsi_site_10210 iPseU_CNN:0;iRNA_PseU:0 10211 chr22 51178756 51178756 1 + A G rs141844965 51178755 + 51178735 51178775 41 AGAAGAGCTCCAGATAAGGTTATGTGGCCGTATGACAGTGC AGAAGAGCTCCAGATAAGGTTGTGTGGCCGTATGACAGTGC < 41bp 0.835024996606197 0.47666056091237 0.5791075 0.37412542 prediction 0.670049993212395 Functional Loss - ACR ENSG00000100312 intronic Human protein_coding chr22:51178755 chr22:51178756 . . 0 22 hPsi_associated_SNPs_4794 0 0 0 0 0 exosome 0.438455247469379 0.438203211490935 0.158215 0 hPsi_site_10211 iPseU_CNN:0.158215;iRNA_PseU:0 10212 chr1 29070218 29070218 1 + A G STAD 29070217 + 29070197 29070237 41 AAATGAAATCTGCTGTGGACTACAACACATGTGCAGGTGTG AAATGAAATCTGCTGTGGACTGCAACACATGTGCAGGTGTG < 41bp 0.834997100928562 0.45498674082176 0.32950705 0.26180008 prediction 0.669994201857125 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29070217 chr1:29070218 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4795 0 0 0 0 0 Cytosol 0.434942024732766 0.435113477307837 0 0 hPsi_site_10212 iPseU_CNN:0;iRNA_PseU:0 10213 chr19 45541024 45541024 1 + A G LUAD 45541023 + 45541003 45541043 41 GGCCTTTGGGGGCGGCCTCCTATCCCCGGGGCCTGAAGCCA GGCCTTTGGGGGCGGCCTCCTGTCCCCGGGGCCTGAAGCCA < 41bp 0.889016891086109 0.554023812761501 0.36863583 0.16618982 prediction 0.669986156649216 Functional Loss - RELB ENSG00000104856 CDS Human protein_coding chr19:45541023 chr19:45541024 synonymous SNV . 0 22 hPsi_associated_SNPs_4796 0 0 0 0 0 Cytosol 0.438718592995102 0.438718592996183 0 0 hPsi_site_10213 iPseU_CNN:0;iRNA_PseU:0 10214 chr2 198324701 198324701 1 + A G COAD 198324700 + 198324680 198324720 41 GATGAGCAGAACTCTTCCACTACATACCTCAATTTTGCCTA GATGAGCAGAACTCTTCCACTGCATACCTCAATTTTGCCTA < 41bp 0.890108527325967 0.555118673141775 0.6639993 0.2738197 prediction 0.669979708368385 Functional Loss - COQ10B ENSG00000115520 CDS Human protein_coding chr2:198324700 chr2:198324701 synonymous SNV . 0 22 hPsi_associated_SNPs_4797 0 0 1 0 1 Ribosome 0.436011981599212 0.438718630777613 0.3279986 0 hPsi_site_10214 iPseU_CNN:0.3279986;iRNA_PseU:0 10215 chr1 146649991 146649991 1 + A G COAD 146649990 + 146649970 146650010 41 ATAAATATGGAGTCAGTGGATATCCAACCCTGAATATGTTT ATAAATATGGAGTCAGTGGATGTCCAACCCTGAATATGTTT < 41bp 0.834989100929769 0.459689870159882 0.6971644 0.5978385 prediction 0.669978201859538 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146649990 chr1:146649991 . . 0 22 hPsi_associated_SNPs_4798 0 0 1 0 0 unknown 0.438718219810307 0.438717065657541 0.1986518 0 hPsi_site_10215 iPseU_CNN:0.1986518;iRNA_PseU:0 10216 chrX 30237395 30237395 1 + A G PRAD 30237394 + 30237374 30237414 41 TCCTGAATATGTTGGGAGTCTATGATGGAGAGGAGCACTCA TCCTGAATATGTTGGGAGTCTGTGATGGAGAGGAGCACTCA < 41bp 0.834976658463786 0.444562759674241 0.2434755 0.18727463 prediction 0.669953316927572 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237394 chrX:30237395 nonsynonymous SNV 0.448 1 22 hPsi_associated_SNPs_4799 0 0 1 0 0 exosome 0.436602191560695 0.437445711205937 0 0 hPsi_site_10216 iPseU_CNN:0;iRNA_PseU:0 10217 chr14 100992220 100992220 1 + A G BLCA 100992219 + 100992199 100992239 41 TCTTGCAGGTGATGAGAAGCTACAAGGCGACCATCCAGCAG TCTTGCAGGTGATGAGAAGCTGCAAGGCGACCATCCAGCAG < 41bp 0.834972971859726 0.420679818635773 0.5489139 0.29177633 prediction 0.669945943719451 Functional Loss - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100992219 chr14:100992220 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4800 0 0 0 0 1 chromatin 0.437452358710798 0.437038809988438 0.0978277999999999 0 hPsi_site_10217 iPseU_CNN:0.0978277999999999;iRNA_PseU:0 10218 chr2 74619198 74619198 1 + A G rs560465920 74619197 + 74619177 74619217 41 GCTGGACACCTGGGACAGGATAAGCGCACGCGCACTGTGCC GCTGGACACCTGGGACAGGATGAGCGCACGCGCACTGTGCC < 41bp 0.862195477868566 0.527240635338678 0.6961694 0.27809954 prediction 0.669909685059776 Functional Loss - DCTN1-AS1 ENSG00000237737 ncRNA_exonic Human antisense chr2:74619197 chr2:74619198 . . 0 22 hPsi_associated_SNPs_4801 0 0 0 0 1 unknown 0.438965396764081 0.436588013025355 0.3923388 0 hPsi_site_10218 iPseU_CNN:0.3923388;iRNA_PseU:0 10219 chr7 150749825 150749825 1 + A G BRCA 150749824 + 150749804 150749844 41 TTTTCCGTCTTCACCCCAAATAAAGTCCTAATGCATCAGCC TTTTCCGTCTTCACCCCAAATGAAGTCCTAATGCATCAGCC < 41bp 0.847999214303956 0.513087632314452 0.33150685 0.23504314 prediction 0.669823163979009 Functional Loss - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150749824 chr7:150749825 nonsynonymous SNV 0.527 3 22 hPsi_associated_SNPs_4802 0 0 1 0 0 exosome 0.438718593561087 0.438713940409845 0 0 hPsi_site_10219 iPseU_CNN:0;iRNA_PseU:0 10220 chr1 44057042 44057042 1 + A G rs3748796 44057041 + 44057021 44057061 41 TGGTGCGGGGATACCGCGTCTACTATACTCCGGACTCCCGC TGGTGCGGGGATACCGCGTCTGCTATACTCCGGACTCCCGC < 41bp 0.834899844721062 0.439739828877111 0.6852045 0.4991443 prediction 0.669799689442123 Functional Loss - PTPRF ENSG00000142949 CDS Human protein_coding chr1:44057041 chr1:44057042 nonsynonymous SNV 0.359 3 22 hPsi_associated_SNPs_4803 0 0 1 0 0 Ribosome 0.438717574998428 0.438718581491549 0.370409 0 hPsi_site_10220 iPseU_CNN:0.370409;iRNA_PseU:0 10221 chr11 85961365 85961365 1 + A G LUAD 85961364 + 85961344 85961384 41 GCTGTCAGTATAGAAAGTGGTACAAACACTGAACGCCCTGA GCTGTCAGTATAGAAAGTGGTGCAAACACTGAACGCCCTGA < 41bp 0.834896004269191 0.424533996466478 0.91351724 0.7078902 prediction 0.669792008538381 Functional Loss - EED ENSG00000074266 CDS Human protein_coding chr11:85961364 chr11:85961365 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_4804 0 0 1 0 1 Ribosome 0.438718118103538 0.43871588456622 0.41125408 0 hPsi_site_10221 iPseU_CNN:0.41125408;iRNA_PseU:0 Red blood cell count 10222 chr19 13879743 13879743 1 + A G rs191513721 13879742 + 13879722 13879762 41 AGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCAGCTCT AGCACCATGGCATTCCCTTCTGCGTGGCTGCCCCCAGCTCT < 41bp 0.904963069430303 0.570084554261426 0.61279905 0.35160944 prediction 0.669757030337755 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13879742 chr19:13879743 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_4805 0 0 1 0 0 Ribosome 0.438718586726567 0.43871859298624 0.2255981 0 hPsi_site_10222 iPseU_CNN:0.2255981;iRNA_PseU:0 10223 chr9 80919826 80919826 1 + A G rs116577685 80919825 + 80919805 80919845 41 AAGAAGTTTGGGACTATAAATATCGTTCACCCTAAACTTGG AAGAAGTTTGGGACTATAAATGTCGTTCACCCTAAACTTGG < 41bp 0.834837434335356 0.430513355898561 0.28221852 0.21590352 prediction 0.669674868670711 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80919825 chr9:80919826 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_4806 1 0 1 0 1 Ribosome 0.438718593004931 0.438718593013087 0 0 hPsi_site_10223 iPseU_CNN:0;iRNA_PseU:0 10224 chr19 4310571 4310571 1 + A G UCEC 4310570 + 4310550 4310590 41 CGCGCAAGAGCGGCAGATGCTACAGGCACTCAAGTTCCTGC CGCGCAAGAGCGGCAGATGCTGCAGGCACTCAAGTTCCTGC < 41bp 0.834835664109885 0.423214469237858 0.49451303 0.27711877 prediction 0.669671328219771 Functional Loss - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4310570 chr19:4310571 synonymous SNV . 0 22 hPsi_associated_SNPs_4807 0 0 0 1 1 cytosol 0.43748239689825 0.438642716134785 0 0 hPsi_site_10224 iPseU_CNN:0;iRNA_PseU:0 10225 chr3 11302015 11302015 1 + A C UCEC 11302014 + 11301994 11302034 41 TCATCCTCTGCTGGATCCCTTATTTCATCTTCTTCATGGTC TCATCCTCTGCTGGATCCCTTCTTTCATCTTCTTCATGGTC < 41bp 0.849724523757899 0.514897599377507 0.45181298 0.5525682 prediction 0.669653848760784 Functional Loss - HRH1 ENSG00000196639 CDS Human protein_coding chr3:11302014 chr3:11302015 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4808 0 0 1 0 0 nucleus 0.438718450795921 0.43871859285885 0 0 hPsi_site_10225 iPseU_CNN:0;iRNA_PseU:0 10226 chr16 67877153 67877153 1 + A G SKCM 67877152 + 67877132 67877172 41 GGGCCCCCAGTTGGTGGTGGTAGGGGAAGAGGGCTTCCCTG GGGCCCCCAGTTGGTGGTGGTGGGGGAAGAGGGCTTCCCTG < 41bp 0.834788674848913 0.45052396958925 0.54181975 0.2419334 prediction 0.669577349697826 Functional Loss - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67877152 chr16:67877153 synonymous SNV . 0 22 hPsi_associated_SNPs_4809 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995115 0.0836395000000001 0 hPsi_site_10226 iPseU_CNN:0.0836395000000001;iRNA_PseU:0 10227 chr10 89711915 89711915 1 + A G GBM 89711914 + 89711894 89711934 41 AGAGGCGCTATGTGTATTATTATAGCTACCTGTTAAAGAAT AGAGGCGCTATGTGTATTATTGTAGCTACCTGTTAAAGAAT < 41bp 0.885937231025966 0.551173308373774 0.7263325 0.6295513 prediction 0.669527845304383 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89711914 chr10:89711915 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4810 1 0 1 0 1 Ribosome 0.438710645825108 0.438717724469304 0.1935624 0 hPsi_site_10227 iPseU_CNN:0.1935624;iRNA_PseU:0 10228 chr11 47594795 47594795 1 + T C UCEC 47594796 - 47594776 47594816 41 ACAAATGCCATGTGAAGCCCTATGTGCTGCCCTTTGCAGGC ACAAATGCCATGTGAAGCCCTGTGTGCTGCCCTTTGCAGGC < 41bp 0.896631816733901 0.561890877425457 0.52186686 0.3576206 prediction 0.669481878616888 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594796 chr11:47594795 nonsynonymous SNV 0.973 3 22 hPsi_associated_SNPs_4811 0 0 1 0 0 nucleus 0.443161274079409 0.441742811731921 0.0437337200000001 0 hPsi_site_10228 iPseU_CNN:0.0437337200000001;iRNA_PseU:0 10229 chr19 7523424 7523424 1 + A G UCEC 7523423 + 7523403 7523443 41 AAAGCCACCCGTCATCTCGTTACAAAAGCTCATCGTGAGGG AAAGCCACCCGTCATCTCGTTGCAAAAGCTCATCGTGAGGG < 41bp 0.904574256143195 0.56984693989819 0.9215205 0.489723 prediction 0.669454632490009 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7523423 chr19:7523424 synonymous SNV . 0 22 hPsi_associated_SNPs_4812 0 0 1 0 1 Cytosol 0.438718946504018 0.43871839807625 0.843041 0 hPsi_site_10229 iPseU_CNN:0.843041;iRNA_PseU:0 10230 chr17 41345565 41345565 1 + A G COAD 41345564 + 41345544 41345584 41 GGTCTGGTGCAGTATCATAGTAGATCCTTTCCCCTCCGAAG GGTCTGGTGCAGTATCATAGTGGATCCTTTCCCCTCCGAAG < 41bp 0.834715926488908 0.416863706115113 0.3001641 0.25635526 prediction 0.669431852977816 Functional Loss - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345564 chr17:41345565 synonymous SNV . 0 22 hPsi_associated_SNPs_4813 0 0 1 0 1 Cytosol 0.43871859084619 0.438718592995186 0 0 hPsi_site_10230 iPseU_CNN:0;iRNA_PseU:0 10231 chr4 144127340 144127340 1 + A G UCEC 144127339 + 144127319 144127359 41 TTAACCTAGGAAATACATGTTATATGAACAGTGTTATACAA TTAACCTAGGAAATACATGTTGTATGAACAGTGTTATACAA < 41bp 0.869932561683794 0.535240452294319 0.4246183 0.3072772 prediction 0.66938421877895 Functional Loss - USP38 ENSG00000170185 CDS Human protein_coding chr4:144127339 chr4:144127340 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4814 0 0 0 0 0 Ribosome 0.439786657317693 0.4397877156522 0 0 hPsi_site_10231 iPseU_CNN:0;iRNA_PseU:0 10232 chr7 150439778 150439778 1 + A G UCEC 150439777 + 150439757 150439797 41 TGCGGGAGTGTGAGAGAAGGTACTGTGCCTTCAACAACTGG TGCGGGAGTGTGAGAGAAGGTGCTGTGCCTTCAACAACTGG < 41bp 0.896382422235224 0.561702224270677 0.72401506 0.33971834 prediction 0.669360395929094 Functional Loss - GIMAP1-GIMAP5;GIMAP5 ENSG00000196329 CDS Human protein_coding chr7:150439777 chr7:150439778 nonsynonymous SNV 0.898 1 22 hPsi_associated_SNPs_4815 0 0 0 0 0 unknown 0.438718592115743 0.438736120098362 0.44803012 0 hPsi_site_10232 iPseU_CNN:0.44803012;iRNA_PseU:0 10233 chr16 2125878 2125878 1 + A G UCEC 2125877 + 2125857 2125897 41 TGTTCGCCATCTCCCTGCCGTACACCAACCCCTCCAAGTGA TGTTCGCCATCTCCCTGCCGTGCACCAACCCCTCCAAGTGA < 41bp 0.893460056940943 0.558794098256948 0.9303999 0.496147 prediction 0.669331917367989 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2125877 chr16:2125878 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_4816 0 0 0 0 2 Endoplasmic reticulum 0.438975395818364 0.43873403425248 0.8607998 0 hPsi_site_10233 iPseU_CNN:0.8607998;iRNA_PseU:0 10234 chr19 18245721 18245721 1 + A G LUSC 18245720 + 18245700 18245740 41 GGGCCATGGGCGTCGTCCTCTATGAGTTTCTGGTGGGCTGC GGGCCATGGGCGTCGTCCTCTGTGAGTTTCTGGTGGGCTGC < 41bp 0.834664846501103 0.418160851338509 0.5752776 0.5534046 prediction 0.669329693002207 Functional Loss - MAST3 ENSG00000099308 CDS Human protein_coding chr19:18245720 chr19:18245721 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_4817 0 0 0 0 2 Cytosol 0.436476924175872 0.438633375387008 0.0437459999999998 0 hPsi_site_10234 iPseU_CNN:0.0437459999999998;iRNA_PseU:0 10235 chr3 35778709 35778709 1 + A G UCEC 35778708 + 35778688 35778728 41 CCGATGGAACTCCTGCAATATACAACCCACCCACCAGTCAG CCGATGGAACTCCTGCAATATGCAACCCACCCACCAGTCAG < 41bp 0.880500717372822 0.545849211986141 0.73643833 0.37502062 prediction 0.669303010773364 Functional Loss - ARPP21 ENSG00000172995 CDS Human protein_coding chr3:35778708 chr3:35778709 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_4818 0 0 0 0 2 Nucleus 0.438718593006177 0.438718593006323 0.47287666 0 hPsi_site_10235 iPseU_CNN:0.47287666;iRNA_PseU:0 10236 chr9 34997056 34997056 1 + A C OV 34997055 + 34997035 34997075 41 TGCACTGTGAACATTCCCACTATCGACGGCCGAGTGATCCC TGCACTGTGAACATTCCCACTCTCGACGGCCGAGTGATCCC < 41bp 0.858438770181374 0.523839261828785 0.3030247 0.27594143 prediction 0.669199016705178 Functional Loss - DNAJB5 ENSG00000137094 CDS Human protein_coding chr9:34997055 chr9:34997056 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_4819 0 0 0 0 1 exosome 0.438273775644403 0.438672093776552 0 0 hPsi_site_10236 iPseU_CNN:0;iRNA_PseU:0 10237 chr17 72368551 72368551 1 + A G UCEC 72368550 + 72368530 72368570 41 CTGGCCTTGGATGTGGCCAATATGGTGGCCATGCTCCACAC CTGGCCTTGGATGTGGCCAATGTGGTGGCCATGCTCCACAC < 41bp 0.893133202190202 0.558540583059185 0.51791346 0.48136893 prediction 0.669185238262034 Functional Loss - GPR142 ENSG00000257008 CDS Human protein_coding chr17:72368550 chr17:72368551 nonsynonymous SNV 0.908 3 22 hPsi_associated_SNPs_4820 0 0 0 0 0 exosome 0.438718592995201 0.438718592995102 0.0358269200000001 0 hPsi_site_10237 iPseU_CNN:0.0358269200000001;iRNA_PseU:0 10238 chr1 42925433 42925433 1 + A G UCEC 42925432 + 42925412 42925452 41 CAGCATCAAGTGGTGGTGGCTAATATCCTTGAGTCACGACA CAGCATCAAGTGGTGGTGGCTGATATCCTTGAGTCACGACA < 41bp 0.880613544129589 0.546079467210361 0.21050492 0.1508384 prediction 0.669068153838455 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42925432 chr1:42925433 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4821 0 0 1 0 0 Ribosome 0.438718302421982 0.440903459106799 0 0 hPsi_site_10238 iPseU_CNN:0;iRNA_PseU:0 10239 chr1 151739746 151739746 1 + A G UCEC 151739745 + 151739725 151739765 41 GGCAAAAGCACCGAGCAGGGTAACCACGACCAGCTTAAAGA GGCAAAAGCACCGAGCAGGGTGACCACGACCAGCTTAAAGA < 41bp 0.834475116298078 0.42995648193094 0.38674584 0.16625428 prediction 0.668950232596157 Functional Loss - OAZ3 ENSG00000143450 CDS Human protein_coding chr1:151739745 chr1:151739746 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_4822 0 0 0 0 1 unknown 0.43871859303168 0.438718592955161 0 0 hPsi_site_10239 iPseU_CNN:0;iRNA_PseU:0 10240 chr12 51449688 51449688 1 + A G STAD 51449687 + 51449667 51449707 41 CAACAAACTGATTTCTTAGATATCTATCATGCTTTCCGGAA CAACAAACTGATTTCTTAGATGTCTATCATGCTTTCCGGAA < 41bp 0.888988198448924 0.554529851339961 0.2614084 0.18051118 prediction 0.668916694217927 Functional Loss - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51449687 chr12:51449688 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_4823 0 0 1 0 1 chromatin 0.438718651094162 0.438718376093208 0 0 hPsi_site_10240 iPseU_CNN:0;iRNA_PseU:0 10241 chr6 26158762 26158762 1 + A G STAD 26158761 + 26158741 26158781 41 GCACCAAGGCCGTCACCAAGTACACCAGTTCCAAGTAACTT GCACCAAGGCCGTCACCAAGTGCACCAGTTCCAAGTAACTT < 41bp 0.880589446328128 0.546136355226478 0.48374155 0.33157367 prediction 0.668906182203301 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158761 chr6:26158762 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_4824 0 0 1 0 1 Cytosol 0.441430021956113 0.443314380357425 0 0 hPsi_site_10241 iPseU_CNN:0;iRNA_PseU:0 10242 chrX 153667448 153667448 1 + A C LUAD 153667447 + 153667427 153667467 41 TCTACAAGGGGGGCAAGATCTACAAAGTGCCGTCCACTGAG TCTACAAGGGGGGCAAGATCTCCAAAGTGCCGTCCACTGAG < 41bp 0.834423468973677 0.469096364041936 0.36836445 0.2773733 prediction 0.668846937947355 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153667447 chrX:153667448 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_4825 0 0 1 0 2 Cytosol 0.438718592994228 0.43871859299258 0 0 hPsi_site_10242 iPseU_CNN:0;iRNA_PseU:0 10243 chr20 44521890 44521890 1 + A G STAD 44521889 + 44521869 44521909 41 TGGGCAATGGACTCTCCTCCTATGAGCAGAATGACAACTCC TGGGCAATGGACTCTCCTCCTGTGAGCAGAATGACAACTCC < 41bp 0.834420254709081 0.418761867595609 0.27112377 0.1960274 prediction 0.668840509418162 Functional Loss - CTSA ENSG00000064601 CDS Human protein_coding chr20:44521889 chr20:44521890 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4826 0 0 1 2 2 Ribosome 0.438738147439102 0.438721763700382 0 0 hPsi_site_10243 iPseU_CNN:0;iRNA_PseU:0 10244 chr1 206566147 206566147 1 + A G LUAD 206566146 + 206566126 206566166 41 GAAGCAAATTGGTAAATCGGTAAAGCAGGAGGACCGGCAGA GAAGCAAATTGGTAAATCGGTGAAGCAGGAGGACCGGCAGA < 41bp 0.834419253635136 0.421131720790138 0.81915843 0.5221776 prediction 0.668838507270272 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566146 chr1:206566147 synonymous SNV . 0 22 hPsi_associated_SNPs_4827 0 0 0 0 0 chromatin 0.438718592994995 0.438718634395339 0.59396166 0 hPsi_site_10244 iPseU_CNN:0.59396166;iRNA_PseU:0 10245 chr3 183854437 183854437 1 + A G STAD 183854436 + 183854416 183854456 41 CCAATGTGGCATTAATTGACTACACTCTGGAATTCCTGACT CCAATGTGGCATTAATTGACTGCACTCTGGAATTCCTGACT < 41bp 0.8344013020049 0.461159501112236 0.5462301 0.2607731 prediction 0.6688026040098 Functional Loss - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183854436 chr3:183854437 nonsynonymous SNV 0.950 5 22 hPsi_associated_SNPs_4828 0 0 1 0 2 Ribosome 0.438838923486645 0.438708372637302 0.0924602000000001 0 hPsi_site_10245 iPseU_CNN:0.0924602000000001;iRNA_PseU:0 10246 chr20 45801489 45801489 1 + A G PRAD 45801488 + 45801468 45801508 41 ACCGGCGGGTGAAGGAGATGTACAATACCTACAAGAACAAC ACCGGCGGGTGAAGGAGATGTGCAATACCTACAAGAACAAC < 41bp 0.834383505032553 0.426362888957574 0.89784205 0.74480283 prediction 0.668767010065105 Functional Loss - EYA2 ENSG00000064655 CDS Human protein_coding chr20:45801488 chr20:45801489 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4829 0 0 1 0 1 Endoplasmic reticulum 0.438718609943691 0.438718550195614 0.30607844 0 hPsi_site_10246 iPseU_CNN:0.30607844;iRNA_PseU:0 10247 chr12 21668638 21668638 1 + A G HNSC 21668637 + 21668617 21668657 41 TGGAGAAAGCAACAATATGGTATAACAACAAGTGAATTTGA TGGAGAAAGCAACAATATGGTGTAACAACAAGTGAATTTGA < 41bp 0.834369746054687 0.479318820805321 0.48252967 0.19353291 prediction 0.668739492109375 Functional Loss - GOLT1B ENSG00000111711 CDS Human protein_coding chr12:21668637 chr12:21668638 synonymous SNV . 0 22 hPsi_associated_SNPs_4830 0 0 0 0 1 Ribosome 0.438720225539112 0.438719934942902 0 0 hPsi_site_10247 iPseU_CNN:0;iRNA_PseU:0 10248 chr18 3458067 3458067 1 + A G rs549486635 3458066 + 3458046 3458086 41 TTGCTAAAACAGCTTCCTGTTACTGAGATGTCTTCAATGGA TTGCTAAAACAGCTTCCTGTTGCTGAGATGTCTTCAATGGA < 41bp 0.834364352165343 0.475105492738937 0.5847722 0.35624605 prediction 0.668728704330687 Functional Loss - TGIF1 ENSG00000177426 UTR3 Human protein_coding chr18:3458066 chr18:3458067 . . 0 22 hPsi_associated_SNPs_4831 0 0 1 2 0 Cytosol 0.438420834390376 0.438774397027494 0.1695444 0 hPsi_site_10248 iPseU_CNN:0.1695444;iRNA_PseU:0 Self-rated health 10249 chr4 57883331 57883331 1 + A G LIHC 57883330 + 57883310 57883350 41 AAGTAGCTTATTGTTCCACATATACACACTGTGAGATTCAT AAGTAGCTTATTGTTCCACATGTACACACTGTGAGATTCAT < 41bp 0.834357487016851 0.442056698364372 0.2582829 0.21291769 prediction 0.668714974033702 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57883330 chr4:57883331 nonsynonymous SNV 0.154 4 22 hPsi_associated_SNPs_4832 0 0 1 0 1 Nucleus 0.430461688348695 0.414675215751778 0 0 hPsi_site_10249 iPseU_CNN:0;iRNA_PseU:0 10250 chr11 65631183 65631183 1 + A G ACC 65631182 + 65631162 65631202 41 GTGGCCCAGGAGACCAATCCTAGAGACCCAGGTGAAGGGCC GTGGCCCAGGAGACCAATCCTGGAGACCCAGGTGAAGGGCC < 41bp 0.834353108497419 0.421688250527714 0.3755461 0.31445077 prediction 0.668706216994838 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631182 chr11:65631183 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_4833 0 0 1 0 1 Ribosome 0.438720975848148 0.438616120565168 0 0 hPsi_site_10250 iPseU_CNN:0;iRNA_PseU:0 10251 chr1 153736638 153736638 1 + A G KIRP 153736637 + 153736617 153736657 41 GTCTGTCCTTGCTTCCTGCCTACAGGAGCTCTTCAAGGCCC GTCTGTCCTTGCTTCCTGCCTGCAGGAGCTCTTCAAGGCCC < 41bp 0.834351041757304 0.426067555138694 0.3325632 0.23129326 prediction 0.668702083514608 Functional Loss - INTS3 ENSG00000143624 CDS Human protein_coding chr1:153736637 chr1:153736638 synonymous SNV . 0 22 hPsi_associated_SNPs_4834 0 0 1 0 2 chromatin 0.438718593003099 0.438718622797622 0 0 hPsi_site_10251 iPseU_CNN:0;iRNA_PseU:0 10252 chr7 7625367 7625367 1 + A G rs117761453 7625366 + 7625346 7625386 41 TAGCACACTGCGATTACAGCTAAATAACCCGTATTTGTGTG TAGCACACTGCGATTACAGCTGAATAACCCGTATTTGTGTG < 41bp 0.834338658194785 0.429234147355032 0.28925836 0.23078662 prediction 0.66867731638957 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7625366 chr7:7625367 synonymous SNV . 0 22 hPsi_associated_SNPs_4835 0 0 0 0 1 Nucleus 0.438020421468739 0.438776359341435 0 0 hPsi_site_10252 iPseU_CNN:0;iRNA_PseU:0 10253 chr5 121487886 121487886 1 + A G rs76277653 121487885 + 121487865 121487905 41 AAAGAGACCTGGGACTGTGATACTATCAAAACTGTCAAGTA AAAGAGACCTGGGACTGTGATGCTATCAAAACTGTCAAGTA < 41bp 0.834337441976624 0.443162388461446 0.24284068 0.18985704 prediction 0.668674883953248 Functional Loss - ZNF474 ENSG00000164185 CDS Human protein_coding chr5:121487885 chr5:121487886 nonsynonymous SNV 0.048 2 22 hPsi_associated_SNPs_4836 0 0 0 0 0 membrane 0.438718602596077 0.438719019107414 0 0 hPsi_site_10253 iPseU_CNN:0;iRNA_PseU:0 10254 chr1 248525847 248525847 1 + A G rs74153570 248525846 + 248525826 248525866 41 CAGTGGTGAACCCTTTAATCTATAGTCTTAGGAATAAGGAT CAGTGGTGAACCCTTTAATCTGTAGTCTTAGGAATAAGGAT < 41bp 0.870561552035924 0.536228148865251 0.5012833 0.35969442 prediction 0.668666806341345 Functional Loss - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525846 chr1:248525847 nonsynonymous SNV 0.329 4 22 hPsi_associated_SNPs_4837 0 0 0 0 0 unknown 0.438736397436644 0.4387189049573 0.00256659999999997 0 hPsi_site_10254 iPseU_CNN:0.00256659999999997;iRNA_PseU:0 10255 chr1 101190319 101190319 1 + A G UCEC 101190318 + 101190298 101190338 41 GAAATTAGATAATGGGAATCTACAGCACCTTTCTGGAAATG GAAATTAGATAATGGGAATCTGCAGCACCTTTCTGGAAATG < 41bp 0.834318386969522 0.432830107814313 0.4932007 0.30805343 prediction 0.668636773939044 Functional Loss - VCAM1 ENSG00000162692 CDS Human protein_coding chr1:101190318 chr1:101190319 synonymous SNV . 0 22 hPsi_associated_SNPs_4838 0 0 0 0 0 exosome 0.438721962018501 0.437771912204192 0 0 hPsi_site_10255 iPseU_CNN:0;iRNA_PseU:0 10256 chr7 130007801 130007801 1 + T C COAD 130007802 - 130007782 130007822 41 TGCTGATGCTGCCAAAAATGTACTCGATCCCATGGACCTTA TGCTGATGCTGCCAAAAATGTGCTCGATCCCATGGACCTTA < 41bp 0.834317345206811 0.44829026353508 0.74084294 0.29583117 prediction 0.668634690413622 Functional Loss - CPA5 ENSG00000158525 CDS Human protein_coding chr7:130007802 chr7:130007801 nonsynonymous SNV 0.930 4 22 hPsi_associated_SNPs_4839 0 0 0 0 0 exosome 0.438604003740946 0.438731752770454 0.48168588 0 hPsi_site_10256 iPseU_CNN:0.48168588;iRNA_PseU:0 10257 chr17 10608466 10608466 1 + A G HNSC 10608465 + 10608445 10608485 41 TGTGTCCTTCAGCTTGGAGATATCATCGATGGATATAATGC TGTGTCCTTCAGCTTGGAGATGTCATCGATGGATATAATGC < 41bp 0.885490484542653 0.551191243244913 0.40975398 0.3045655 prediction 0.668598482595479 Functional Loss - ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608465 chr17:10608466 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_4840 0 0 1 0 0 Cytosol 0.43922948002288 0.438886990050453 0 0 hPsi_site_10257 iPseU_CNN:0;iRNA_PseU:0 10258 chrX 49029563 49029563 1 + A G STAD 49029562 + 49029542 49029582 41 ATTGAGATGATCCTTGCTGCTATTTTCTTTGTTGTCTACAT ATTGAGATGATCCTTGCTGCTGTTTTCTTTGTTGTCTACAT < 41bp 0.834295374591882 0.43294091916265 0.26470608 0.19968715 prediction 0.668590749183764 Functional Loss - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49029562 chrX:49029563 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_4841 0 0 1 0 1 Ribosome 0.437711820280494 0.438278905663211 0 0 hPsi_site_10258 iPseU_CNN:0;iRNA_PseU:0 10259 chr4 95200144 95200144 1 + A G LUAD 95200143 + 95200123 95200163 41 AATGGCCAATCATCCTTTATTACATCGCCAATATTACACAG AATGGCCAATCATCCTTTATTGCATCGCCAATATTACACAG < 41bp 0.834281956606518 0.446149992069797 0.55010295 0.39773282 prediction 0.668563913213037 Functional Loss - SMARCAD1 ENSG00000163104 CDS Human protein_coding chr4:95200143 chr4:95200144 synonymous SNV . 0 22 hPsi_associated_SNPs_4842 0 0 1 0 3 Nucleus 0.438725672568802 0.438718151224578 0.1002059 0 hPsi_site_10259 iPseU_CNN:0.1002059;iRNA_PseU:0 10260 chr12 100711643 100711643 1 + A G LAML 100711642 + 100711622 100711662 41 CAAAACCCCTCCTGATGAGATAAAGAACAGTGTTCTACCCA CAAAACCCCTCCTGATGAGATGAAGAACAGTGTTCTACCCA < 41bp 0.894396921090594 0.560122352695818 0.3313676 0.2156769 prediction 0.668549136789552 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100711642 chr12:100711643 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4843 0 0 0 0 2 chromatin 0.438644165498421 0.438827400168468 0 0 hPsi_site_10260 iPseU_CNN:0;iRNA_PseU:0 10261 chr2 64113619 64113619 1 + A C rs376047157 64113618 + 64113598 64113638 41 TGGATTTCTCTTGCAGCAGTTAAAAGACTGCAGGAGCAAAA TGGATTTCTCTTGCAGCAGTTCAAAGACTGCAGGAGCAAAA < 41bp 0.840072822283097 0.505832386527186 0.6398956 0.62224615 prediction 0.668480871511823 Functional Loss - UGP2 ENSG00000169764 CDS Human protein_coding chr2:64113618 chr2:64113619 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4844 0 0 1 0 1 Ribosome 0.438950334540719 0.439247491553153 0.0352988999999999 0 hPsi_site_10261 iPseU_CNN:0.0352988999999999;iRNA_PseU:0 10262 chr15 90808954 90808954 1 + A G STAD 90808953 + 90808933 90808973 41 GTTTGCGTCGACATGGCGGTTACCCTGAGTCTCTTGCTGGG GTTTGCGTCGACATGGCGGTTGCCCTGAGTCTCTTGCTGGG < 41bp 0.834214571077646 0.446571232407197 0.71221524 0.32279408 prediction 0.668429142155291 Functional Loss - NGRN ENSG00000182768 CDS Human protein_coding chr15:90808953 chr15:90808954 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4845 0 0 1 0 0 Ribosome 0.438710631806741 0.438713571576257 0.42443048 0 hPsi_site_10262 iPseU_CNN:0.42443048;iRNA_PseU:0 10263 chr10 122648632 122648632 1 + A G UCEC 122648631 + 122648611 122648651 41 TGCATCGCTTGGAAAGGTGATACATTAGTGCTTGGAGATAT TGCATCGCTTGGAAAGGTGATGCATTAGTGCTTGGAGATAT < 41bp 0.834194017066626 0.431140596409133 0.5792227 0.31778938 prediction 0.668388034133252 Functional Loss - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122648631 chr10:122648632 nonsynonymous SNV 0.944 2 22 hPsi_associated_SNPs_4846 0 0 1 0 2 Nucleus 0.438719313863391 0.438846697052498 0.1584454 0 hPsi_site_10263 iPseU_CNN:0.1584454;iRNA_PseU:0 10264 chr12 72179888 72179888 1 + A G rs187693870 72179887 + 72179867 72179907 41 GAGACGGGGTTTCACCAGGTTAGCCAGGATGGTCTCGATCT GAGACGGGGTTTCACCAGGTTGGCCAGGATGGTCTCGATCT < 41bp 0.870861999579579 0.536673110625519 0.2357103 0.15233651 prediction 0.66837777790812 Functional Loss - RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179887 chr12:72179888 . . 0 22 hPsi_associated_SNPs_4847 0 0 0 1 0 Ribosome 0.438739422409816 0.438718592374246 0 0 hPsi_site_10264 iPseU_CNN:0;iRNA_PseU:0 10265 chr22 38209592 38209592 1 + A G COAD 38209591 + 38209571 38209611 41 CCACCTGGACATGGCCGACCTAGAAGCCAAGCTGCAGGAGG CCACCTGGACATGGCCGACCTGGAAGCCAAGCTGCAGGAGG < 41bp 0.834183510581147 0.422617548433087 0.47252122 0.22820985 prediction 0.668367021162294 Functional Loss - GCAT ENSG00000100116 CDS Human protein_coding chr22:38209591 chr22:38209592 synonymous SNV . 0 22 hPsi_associated_SNPs_4848 0 0 1 0 1 Cytosol 0.4387185913737 0.438718592995102 0 0 hPsi_site_10265 iPseU_CNN:0;iRNA_PseU:0 10266 chr1 55524197 55524197 1 + A C rs540796 55524196 + 55524176 55524216 41 GCAGCTGTTTTGCAGGACTGTATGGTCAGCACACTCGGGGC GCAGCTGTTTTGCAGGACTGTCTGGTCAGCACACTCGGGGC < 41bp 0.86983880247477 0.535662861544823 0.57885194 0.31888714 prediction 0.668351881859895 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524196 chr1:55524197 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4849 0 0 1 0 1 Nucleus 0.438696249695714 0.439277990631817 0.15770388 0 hPsi_site_10266 iPseU_CNN:0.15770388;iRNA_PseU:0 10267 chr10 119307742 119307742 1 + A G HNSC 119307741 + 119307721 119307761 41 TAGACGTGACCTCAGATGATTAAAAACATAAACCTAACCCC TAGACGTGACCTCAGATGATTGAAAACATAAACCTAACCCC < 41bp 0.844378189915915 0.510218707406878 0.37556303 0.29931122 prediction 0.668318965018073 Functional Loss - EMX2 ENSG00000170370 CDS Human protein_coding chr10:119307741 chr10:119307742 synonymous SNV . 0 22 hPsi_associated_SNPs_4850 0 0 1 0 0 exosome 0.438718615675326 0.438718593223097 0 0 hPsi_site_10267 iPseU_CNN:0;iRNA_PseU:0 10268 chr5 6668361 6668361 1 + A G LUAD 6668360 + 6668340 6668380 41 TATCCAAAGTTCAGAAAAATTATAATTCCATTTTTGTTTTA TATCCAAAGTTCAGAAAAATTGTAATTCCATTTTTGTTTTA < 41bp 0.834159053503237 0.464517242499283 0.278687 0.2383816 prediction 0.668318107006475 Functional Loss - SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6668360 chr5:6668361 nonsynonymous SNV 0.146 0 22 hPsi_associated_SNPs_4851 0 0 0 2 1 Ribosome 0.438718397652461 0.438718491485144 0 0 hPsi_site_10268 iPseU_CNN:0;iRNA_PseU:0 10269 chr16 71411645 71411645 1 + A G LUAD 71411644 + 71411624 71411664 41 GTGGGCTCCAGCGCCGAGTTTATGGAGGTGAGGCCAAGGCA GTGGGCTCCAGCGCCGAGTTTGTGGAGGTGAGGCCAAGGCA < 41bp 0.901279878093234 0.567127441233517 0.64986277 0.4423433 prediction 0.668304873719435 Functional Loss - CALB2 ENSG00000172137 CDS Human protein_coding chr16:71411644 chr16:71411645 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4852 0 0 0 0 2 Ribosome 0.438718607506324 0.438718615710115 0.29972554 0 hPsi_site_10269 iPseU_CNN:0.29972554;iRNA_PseU:0 10270 chr9 36665448 36665448 1 + A G rs201838679 36665447 + 36665427 36665467 41 ATTAAAGAACAAAGAAAATGTATATACTCCTAAGTCTGCTG ATTAAAGAACAAAGAAAATGTGTATACTCCTAAGTCTGCTG < 41bp 0.834141066567394 0.449747192158756 0.27229613 0.2517346 prediction 0.668282133134787 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36665447 chr9:36665448 synonymous SNV . 0 22 hPsi_associated_SNPs_4853 0 0 1 0 0 chromatin 0.439484569651353 0.439086879783004 0 0 hPsi_site_10270 iPseU_CNN:0;iRNA_PseU:0 10271 chr15 75797581 75797581 1 + A G rs541291752 75797580 + 75797560 75797600 41 CGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAG CGGTGCAAGATGTGCTTTGTTGAACAGATGCTTGAAGGCAG < 41bp 0.846916327847353 0.512785102587674 0.5379311 0.3471685 prediction 0.668262450519359 Functional Loss - PTPN9 ENSG00000169410 intronic Human protein_coding chr15:75797580 chr15:75797581 . . 0 22 hPsi_associated_SNPs_4854 0 0 0 0 0 Ribosome 0.438741190940867 0.438463898347594 0.0758622 0 hPsi_site_10271 iPseU_CNN:0.0758622;iRNA_PseU:0 10272 chr15 22962283 22962283 1 + A G STAD 22962282 + 22962262 22962302 41 TATGTTTTGACCAATTTGTTTACAAGCTAGCAGACCAGATA TATGTTTTGACCAATTTGTTTGCAAGCTAGCAGACCAGATA < 41bp 0.834101567452924 0.428222801487397 0.36291084 0.25462717 prediction 0.668203134905848 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22962282 chr15:22962283 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_4855 0 0 1 0 2 Cytosol 0.434694488723092 0.436199978266673 0 0 hPsi_site_10272 iPseU_CNN:0;iRNA_PseU:0 10273 chr20 42979326 42979326 1 + A G LGG 42979325 + 42979305 42979345 41 ACTGGATTGGCGAGTCCCCGTACAAGATGGGAAAGCCGTGC ACTGGATTGGCGAGTCCCCGTGCAAGATGGGAAAGCCGTGC < 41bp 0.834099279978646 0.43709301037699 0.8613892 0.38549474 prediction 0.668198559957292 Functional Loss - R3HDML ENSG00000101074 CDS Human protein_coding chr20:42979325 chr20:42979326 nonsynonymous SNV 0.060 4 22 hPsi_associated_SNPs_4856 0 0 0 0 1 cytosol 0.43871859299512 0.438718592995115 0.7227784 0 hPsi_site_10273 iPseU_CNN:0.7227784;iRNA_PseU:0 10274 chrX 144337584 144337584 1 + A G rs1151973 144337583 + 144337563 144337603 41 GAAGGATCTTCACAGGAGGATAAAGACGTAGAATTACCTGA GAAGGATCTTCACAGGAGGATGAAGACGTAGAATTACCTGA < 41bp 0.855713028171486 0.521627902001329 0.79247844 0.5193953 prediction 0.668170252340313 Functional Loss - SPANXN1 ENSG00000203923 UTR3 Human protein_coding chrX:144337583 chrX:144337584 . . 0 22 hPsi_associated_SNPs_4857 0 0 0 0 0 unknown 0.438718599726284 0.438718593022919 0.54616628 0 hPsi_site_10274 iPseU_CNN:0.54616628;iRNA_PseU:0 10275 chr11 55890216 55890216 1 + A G UCEC 55890215 + 55890195 55890235 41 CCTCAATGGCCTATGATCGCTATGCAGCGATCTGCAGTCCT CCTCAATGGCCTATGATCGCTGTGCAGCGATCTGCAGTCCT < 41bp 0.87983333260543 0.545777148558558 0.84483314 0.6009317 prediction 0.668112368093746 Functional Loss - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55890215 chr11:55890216 nonsynonymous SNV 0.831 4 22 hPsi_associated_SNPs_4858 0 0 0 0 0 unknown 0.438702486076437 0.438707118039028 0.48780288 0 hPsi_site_10275 iPseU_CNN:0.48780288;iRNA_PseU:0 10276 chr20 21349136 21349136 1 + A G UCEC 21349135 + 21349115 21349155 41 GAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCA GAGGCTCAGGAACTGGCATTTGCAGCAATGCTGCACCACCA < 41bp 0.900808047875852 0.566794360017119 0.6830226 0.41115588 prediction 0.668027375717467 Functional Loss - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21349135 chr20:21349136 nonsynonymous SNV 0.651 3 22 hPsi_associated_SNPs_4859 0 0 1 0 2 Cytosol 0.4387628418359 0.438718598941544 0.3660452 0 hPsi_site_10276 iPseU_CNN:0.3660452;iRNA_PseU:0 10277 chr9 133569272 133569272 1 + A G UCEC 133569271 + 133569251 133569291 41 CATCTAGTGGTGCCGGGGGATACAATCACTACGGACACAGG CATCTAGTGGTGCCGGGGGATGCAATCACTACGGACACAGG < 41bp 0.833990392043609 0.445779130199825 0.48932076 0.28590527 prediction 0.667980784087218 Functional Loss - EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133569271 chr9:133569272 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4860 0 0 1 0 1 Ribosome 0.438718731898297 0.438783171655226 0 0 hPsi_site_10277 iPseU_CNN:0;iRNA_PseU:0 10278 chr16 56673888 56673888 1 + A G rs143993797 56673887 + 56673867 56673907 41 CGGACAGCCCTGCTCGAAGATATAGAAAGAGTGACCTGCAC CGGACAGCCCTGCTCGAAGATGTAGAAAGAGTGACCTGCAC < 41bp 0.88786888768817 0.553880283021809 0.40488416 0.25932518 prediction 0.667977209332721 Functional Loss - MT1A ENSG00000205362 UTR3 Human protein_coding chr16:56673887 chr16:56673888 . . 0 22 hPsi_associated_SNPs_4861 0 0 0 0 0 exosome 0.438667095102869 0.438429342430174 0 0 hPsi_site_10278 iPseU_CNN:0;iRNA_PseU:0 10279 chr19 37618596 37618596 1 + A G COAD 37618595 + 37618575 37618615 41 TGTGGGAAAGCCTTTATTCGTAGCTCACAACTTACCCGACA TGTGGGAAAGCCTTTATTCGTGGCTCACAACTTACCCGACA < 41bp 0.833971952400039 0.441542755023807 0.5609966 0.28705803 prediction 0.667943904800077 Functional Loss - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618595 chr19:37618596 nonsynonymous SNV 0.475 0 22 hPsi_associated_SNPs_4862 0 0 1 0 0 chromatin 0.438715874586178 0.438718592995248 0.1219932 0 hPsi_site_10279 iPseU_CNN:0.1219932;iRNA_PseU:0 10280 chr9 72833369 72833369 1 + T C GBM 72833370 - 72833350 72833390 41 GCAGGCCAGTGCCCCCTCCATACATGTGGTAGAAAAAGGTC GCAGGCCAGTGCCCCCTCCATGCATGTGGTAGAAAAAGGTC < 41bp 0.892527045582819 0.558568606821573 0.4494567 0.24252132 prediction 0.667916877522492 Functional Loss - MAMDC2 ENSG00000165072 CDS Human protein_coding chr9:72833370 chr9:72833369 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4863 0 0 0 0 1 nucleus 0.438708848579137 0.438718437757299 0 0 hPsi_site_10280 iPseU_CNN:0;iRNA_PseU:0 10281 chr22 32881154 32881154 1 + A G UCEC 32881153 + 32881133 32881173 41 CTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGCCTTT CTCTGCGAGGGCAGCTCCGCTGCTCTCACCTGTGTGCCTTT < 41bp 0.894005319546884 0.560093092576138 0.7341909 0.3350017 prediction 0.667824453941492 Functional Loss - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881153 chr22:32881154 nonsynonymous SNV 0.148 0 22 hPsi_associated_SNPs_4864 1 0 1 0 2 chromatin 0.438718084098051 0.438718619674993 0.4683818 0 hPsi_site_10281 iPseU_CNN:0.4683818;iRNA_PseU:0 10282 chr6 88210995 88210995 1 + A G UCEC 88210994 + 88210974 88211014 41 GTGTGCTGGAGTTACGCTTGTACAGTGGAAACCAGCCCAAG GTGTGCTGGAGTTACGCTTGTGCAGTGGAAACCAGCCCAAG < 41bp 0.833899786008822 0.433804531519536 0.79868615 0.49803337 prediction 0.667799572017643 Functional Loss - SLC35A1 ENSG00000164414 CDS Human protein_coding chr6:88210994 chr6:88210995 synonymous SNV . 0 22 hPsi_associated_SNPs_4865 0 0 0 0 1 Endoplasmic reticulum 0.438698154948821 0.438692905104208 0.5973723 0 hPsi_site_10282 iPseU_CNN:0.5973723;iRNA_PseU:0 10283 chr19 36229196 36229196 1 + A G UCEC 36229195 + 36229175 36229215 41 CCCTGCAGGGCATCGGGTGCTATATGTTCCGCATGGATGAC CCCTGCAGGGCATCGGGTGCTGTATGTTCCGCATGGATGAC < 41bp 0.833881158136032 0.445967453586143 0.72074354 0.33473328 prediction 0.667762316272064 Functional Loss - KMT2B ENSG00000272333 CDS Human protein_coding chr19:36229195 chr19:36229196 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4866 0 0 1 0 1 chromatin 0.438712750944976 0.43853243814367 0.44148708 0 hPsi_site_10283 iPseU_CNN:0.44148708;iRNA_PseU:0 10284 chrX 23018961 23018961 1 + A C UCEC 23018960 + 23018940 23018980 41 ATTCTACAAGGAATAGATCTTATAGTAGTTGCACAAACCGG ATTCTACAAGGAATAGATCTTCTAGTAGTTGCACAAACCGG < 41bp 0.842036758384602 0.508158132598122 0.27527022 0.2670403 prediction 0.66775725157296 Functional Loss - DDX53 ENSG00000184735 CDS Human protein_coding chrX:23018960 chrX:23018961 nonsynonymous SNV 0.928 2 22 hPsi_associated_SNPs_4867 0 0 0 0 0 unknown 0.438694743342124 0.438722697143529 0 0 hPsi_site_10284 iPseU_CNN:0;iRNA_PseU:0 10285 chr1 55175664 55175664 1 + A G rs149350120 55175663 + 55175643 55175683 41 CAGAAGCATCAGTGTGCATCTACGCAGCCCAGGTCCAGGAC CAGAAGCATCAGTGTGCATCTGCGCAGCCCAGGTCCAGGAC < 41bp 0.833875641110778 0.439180775017723 0.30944273 0.18881828 prediction 0.667751282221556 Functional Loss - MROH7 ENSG00000184313 CDS Human protein_coding chr1:55175663 chr1:55175664 nonsynonymous SNV 0.082 0 22 hPsi_associated_SNPs_4868 0 0 0 0 1 exosome 0.438707998001625 0.438761552743697 0 0 hPsi_site_10285 iPseU_CNN:0;iRNA_PseU:0 10286 chr7 143826458 143826458 1 + A G CESC 143826457 + 143826437 143826477 41 CCCAAGATGCTGACGAATCTTATGAACCAGGAAAGCACCAT CCCAAGATGCTGACGAATCTTGTGAACCAGGAAAGCACCAT < 41bp 0.877122144529957 0.543271149471619 0.36054045 0.19808021 prediction 0.667701990116677 Functional Loss - OR2A14 ENSG00000221938 CDS Human protein_coding chr7:143826457 chr7:143826458 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4869 0 0 0 0 0 unknown 0.436674841328268 0.435845609323426 0 0 hPsi_site_10286 iPseU_CNN:0;iRNA_PseU:0 10287 chr16 1837726 1837726 1 + A G STAD 1837725 + 1837705 1837745 41 TGGCCTGGGGGGAGCTGGACTACCTGGTGGTGGACACGCCC TGGCCTGGGGGGAGCTGGACTGCCTGGTGGTGGACACGCCC < 41bp 0.894670230544475 0.560820403379554 0.85926723 0.321261 prediction 0.667699654329843 Functional Loss - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1837725 chr16:1837726 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4870 0 0 1 0 1 Ribosome 0.43871859314067 0.43871859323965 0.71853446 0 hPsi_site_10287 iPseU_CNN:0.71853446;iRNA_PseU:0 10288 chr18 47088747 47088747 1 + A C LUSC 47088746 + 47088726 47088766 41 CTTTGCTGCGGGGAGCCCCGTACCTTTTGGTCCAGAGGGAC CTTTGCTGCGGGGAGCCCCGTCCCTTTTGGTCCAGAGGGAC < 41bp 0.836728383745903 0.50296563540947 0.37786585 0.15961254 prediction 0.667525496672866 Functional Loss - LIPG ENSG00000101670 CDS Human protein_coding chr18:47088746 chr18:47088747 synonymous SNV . 0 22 hPsi_associated_SNPs_4871 0 0 0 0 1 Nucleus 0.438718593030529 0.438718592819304 0 0 hPsi_site_10288 iPseU_CNN:0;iRNA_PseU:0 10289 chr19 11942884 11942884 1 + A G HNSC 11942883 + 11942863 11942903 41 AAGCATTCACGTGTCCCCGTTATGTTCGTATACATGAAAGG AAGCATTCACGTGTCCCCGTTGTGTTCGTATACATGAAAGG < 41bp 0.885349457635946 0.551708154044666 0.91835976 0.663687 prediction 0.667282607182561 Functional Loss - ZNF440 ENSG00000171295 CDS Human protein_coding chr19:11942883 chr19:11942884 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_4872 0 0 0 0 0 Nucleus 0.408470314499443 0.400419268039002 0.50934552 0 hPsi_site_10289 iPseU_CNN:0.50934552;iRNA_PseU:0 10290 chr9 91930195 91930195 1 + A G STAD 91930194 + 91930174 91930214 41 AGAGTCTAGGCTGGGTTCATTACATGATTCATGAGCCAGGT AGAGTCTAGGCTGGGTTCATTGCATGATTCATGAGCCAGGT < 41bp 0.887174589269614 0.553631772735742 0.46925032 0.282116 prediction 0.667085633067743 Functional Loss - CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930194 chr9:91930195 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4873 0 0 1 0 1 Ribosome 0.438718538684859 0.438718856429088 0 0 hPsi_site_10290 iPseU_CNN:0;iRNA_PseU:0 10291 chr17 1943609 1943609 1 + A G UCEC 1943608 + 1943588 1943628 41 ATAGCCACTGCCCGCTCAGCTAAGTCCTGGGGCCTTATTCT ATAGCCACTGCCCGCTCAGCTGAGTCCTGGGGCCTTATTCT < 41bp 0.893113629806791 0.559570816795192 0.7216818 0.32052016 prediction 0.667085626023199 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943608 chr17:1943609 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_4874 0 0 1 0 1 Endoplasmic reticulum 0.438633940487251 0.43868114610367 0.4433636 0 hPsi_site_10291 iPseU_CNN:0.4433636;iRNA_PseU:0 10292 chr14 24587991 24587991 1 + A G STAD 24587990 + 24587970 24588010 41 AATATCTATGGTGAGGGAGATACACACACTGCCCTGGATCT AATATCTATGGTGAGGGAGATGCACACACTGCCCTGGATCT < 41bp 0.895851019395708 0.562321519540715 0.599583 0.31448472 prediction 0.667058999709987 Functional Loss - DCAF11 ENSG00000100897 CDS Human protein_coding chr14:24587990 chr14:24587991 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4875 0 0 1 0 2 Ribosome 0.435520287439289 0.438438612289338 0.199166 0 hPsi_site_10292 iPseU_CNN:0.199166;iRNA_PseU:0 10293 chr19 36278727 36278727 1 + A G UCEC 36278726 + 36278706 36278746 41 ACAGGGGAGAGAACCTGTACTATGAGATCGGGGCAAGTGAG ACAGGGGAGAGAACCTGTACTGTGAGATCGGGGCAAGTGAG < 41bp 0.833514117696853 0.436567605013031 0.55682397 0.552868 prediction 0.667028235393706 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278726 chr19:36278727 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_4876 0 0 1 0 0 chromatin 0.439226904513294 0.438798567960299 0.00791193999999984 0 hPsi_site_10293 iPseU_CNN:0.00791193999999984;iRNA_PseU:0 10294 chrX 55033144 55033144 1 + A G UCEC 55033143 + 55033123 55033163 41 ACTATGGCTCCCGGCTTGACTATGTGCTGGGGGACAGGACC ACTATGGCTCCCGGCTTGACTGTGTGCTGGGGGACAGGACC < 41bp 0.833513646088206 0.432604570077842 0.65299 0.27840164 prediction 0.667027292176412 Functional Loss - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033143 chrX:55033144 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_4877 0 0 1 0 0 Ribosome 0.438718592969767 0.438718592679381 0.30598 0 hPsi_site_10294 iPseU_CNN:0.30598;iRNA_PseU:0 10295 chr7 6628249 6628249 1 + A G SKCM 6628248 + 6628228 6628268 41 TACCTTTTCTCTGCTCCTAGTACCTGTTCCTGACTTTTCCA TACCTTTTCTCTGCTCCTAGTGCCTGTTCCTGACTTTTCCA < 41bp 0.833489113666281 0.4425703812389 0.38799363 0.14208496 prediction 0.666978227332562 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628248 chr7:6628249 nonsynonymous SNV 0.634 3 22 hPsi_associated_SNPs_4878 0 0 1 0 1 Cytosol 0.438718690470573 0.438718595390438 0 0 hPsi_site_10295 iPseU_CNN:0;iRNA_PseU:0 10296 chr17 41180661 41180661 1 + A G UCEC 41180660 + 41180640 41180680 41 CCGGGGGAATGAGGGCGAGATACACAAGGATCGAGCCAAAA CCGGGGGAATGAGGGCGAGATGCACAAGGATCGAGCCAAAA < 41bp 0.893596719173966 0.56012636288909 0.5512049 0.24746138 prediction 0.666940712569751 Functional Loss - RND2 ENSG00000108830 CDS Human protein_coding chr17:41180660 chr17:41180661 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4879 0 0 1 0 0 Nucleus 0.438718582063185 0.438718523319024 0.1024098 0 hPsi_site_10296 iPseU_CNN:0.1024098;iRNA_PseU:0 10297 chr1 12030766 12030766 1 + A G LUSC 12030765 + 12030745 12030785 41 GGCTACGAGAACGTGCCGACTATTGACATCCACATGAACCA GGCTACGAGAACGTGCCGACTGTTGACATCCACATGAACCA < 41bp 0.899757266976476 0.566308361717571 0.8420465 0.6318127 prediction 0.666897810517809 Functional Loss - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12030765 chr1:12030766 nonsynonymous SNV 0.833 4 22 hPsi_associated_SNPs_4880 0 0 1 0 1 Nucleus 0.481627343845237 0.435372521860035 0.4204676 0 hPsi_site_10297 iPseU_CNN:0.4204676;iRNA_PseU:0 10298 chr16 66586642 66586642 1 + A G SKCM 66586641 + 66586621 66586661 41 GGATAACGTGCAGCCGAAAATAAAACATCGCCCCTTCTGCT GGATAACGTGCAGCCGAAAATGAAACATCGCCCCTTCTGCT < 41bp 0.888684466434738 0.555280639159142 0.41847894 0.26676804 prediction 0.66680765455119 Functional Loss - CKLF;CKLF-CMTM1 ENSG00000217555;ENSG00000254788 CDS Human other chr16:66586641 chr16:66586642 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4881 0 0 1 0 1 unknown 0.438718458604194 0.438718069649461 0 0 hPsi_site_10298 iPseU_CNN:0;iRNA_PseU:0 10299 chr17 75196681 75196681 1 + A G CESC 75196680 + 75196660 75196700 41 GAAAGCAGCATCAGGTAGACTACATTCTTGAAACCTGGACC GAAAGCAGCATCAGGTAGACTGCATTCTTGAAACCTGGACC < 41bp 0.833402979503759 0.42370351745579 0.38024637 0.19726163 prediction 0.666805959007517 Functional Loss - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75196680 chr17:75196681 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_4882 0 0 1 0 1 Cytosol 0.43871892914134 0.438718601573768 0 0 hPsi_site_10299 iPseU_CNN:0;iRNA_PseU:0 10300 chr12 56397793 56397793 1 + A G LUSC 56397792 + 56397772 56397812 41 CTGAGCTGCTGACAGAAAACTACATCACACCCAACCCTATC CTGAGCTGCTGACAGAAAACTGCATCACACCCAACCCTATC < 41bp 0.898700284916945 0.565325234525222 0.46167988 0.25466436 prediction 0.666750100783447 Functional Loss - SUOX ENSG00000139531 CDS Human protein_coding chr12:56397792 chr12:56397793 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4883 0 0 1 0 0 Cytosol 0.445031710624403 0.439301452225209 0 0 hPsi_site_10300 iPseU_CNN:0;iRNA_PseU:0 10301 chr3 38263170 38263170 1 + A G LIHC 38263169 + 38263149 38263189 41 TGTTGGATGGCACCTGAAGTTATGGAACAGGTACCGTGTCT TGTTGGATGGCACCTGAAGTTGTGGAACAGGTACCGTGTCT < 41bp 0.833340428607231 0.428360210884878 0.6827368 0.3192934 prediction 0.666680857214463 Functional Loss - OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38263169 chr3:38263170 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4884 0 0 1 0 1 Ribosome 0.438718589739238 0.438718418507489 0.3654736 0 hPsi_site_10301 iPseU_CNN:0.3654736;iRNA_PseU:0 10302 chr22 42263037 42263037 1 + A G COAD 42263036 + 42263016 42263056 41 GTCATTCACCCAGGTCACATTACCTTCCTTCTCTCCCTCGG GTCATTCACCCAGGTCACATTGCCTTCCTTCTCTCCCTCGG < 41bp 0.898060085920234 0.5647239654451 0.48267943 0.2815504 prediction 0.666672240950267 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42263036 chr22:42263037 synonymous SNV . 0 22 hPsi_associated_SNPs_4885 0 0 1 0 0 Ribosome 0.438730111137944 0.438722937835232 0 0 hPsi_site_10302 iPseU_CNN:0;iRNA_PseU:0 10303 chr11 68703834 68703834 1 + A G LUSC 68703833 + 68703813 68703853 41 TTTTGAAGACCCTGGTGGAGTATTTCACACAGCATGGGGAA TTTTGAAGACCCTGGTGGAGTGTTTCACACAGCATGGGGAA < 41bp 0.896468975738717 0.56314463510975 0.5597524 0.5133047 prediction 0.666648681257936 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68703833 chr11:68703834 nonsynonymous SNV 0.882 4 22 hPsi_associated_SNPs_4886 0 0 1 0 0 chromatin 0.438718592993017 0.438718593018144 0.0928954000000002 0 hPsi_site_10303 iPseU_CNN:0.0928954000000002;iRNA_PseU:0 10304 chr20 55967801 55967801 1 + A C DLBC 55967800 + 55967780 55967820 41 AGGCCAACGTGAACCTGGCATATCTGGGCGCCAAGCCGCGG AGGCCAACGTGAACCTGGCATCTCTGGGCGCCAAGCCGCGG < 41bp 0.833320031255575 0.478367674027496 0.6380067 0.32364076 prediction 0.666640062511151 Functional Loss - RBM38 ENSG00000132819 CDS Human protein_coding chr20:55967800 chr20:55967801 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_4887 0 0 1 0 2 Ribosome 0.438718603169663 0.438720422133818 0.2760134 0 hPsi_site_10304 iPseU_CNN:0.2760134;iRNA_PseU:0 10305 chr19 7677475 7677475 1 + A G UCEC 7677474 + 7677454 7677494 41 CCCACGAGGGGCTGGGGGAATACAATCGAGCGGTCAGCAAG CCCACGAGGGGCTGGGGGAATGCAATCGAGCGGTCAGCAAG < 41bp 0.833304139368075 0.425547166495718 0.29456136 0.24262825 prediction 0.66660827873615 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677474 chr19:7677475 nonsynonymous SNV 0.814 3 22 hPsi_associated_SNPs_4888 0 0 1 0 0 nucleus 0.438718592995101 0.438718592995102 0 0 hPsi_site_10305 iPseU_CNN:0;iRNA_PseU:0 10306 chr14 59113479 59113479 1 + A G CESC 59113478 + 59113458 59113498 41 CCGCGCCTGTGCCTCTGCCCTACGCCAGCCCCTACGCCTAC CCGCGCCTGTGCCTCTGCCCTGCGCCAGCCCCTACGCCTAC < 41bp 0.833273144331778 0.430834837300153 0.7512872 0.39259237 prediction 0.666546288663556 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113478 chr14:59113479 nonsynonymous SNV 0.234 2 22 hPsi_associated_SNPs_4889 0 0 1 0 0 exosome 0.438717701116023 0.438714904715705 0.5025744 0 hPsi_site_10306 iPseU_CNN:0.5025744;iRNA_PseU:0 10307 chr9 140150783 140150783 1 + A G LUAD 140150782 + 140150762 140150802 41 ATCCTGTGAGTTGTTCCAGGTACAAGAAGCTGGAAGACCTT ATCCTGTGAGTTGTTCCAGGTGCAAGAAGCTGGAAGACCTT < 41bp 0.833231357018177 0.433701392859619 0.6696137 0.3080453 prediction 0.666462714036353 Functional Loss - NELFB ENSG00000188986 CDS Human protein_coding chr9:140150782 chr9:140150783 nonsynonymous SNV 0.904 2 22 hPsi_associated_SNPs_4890 0 0 1 0 2 Ribosome 0.438718592995102 0.438718592995102 0.3392274 0 hPsi_site_10307 iPseU_CNN:0.3392274;iRNA_PseU:0 10308 chr6 13977941 13977941 1 + A G UCEC 13977940 + 13977920 13977960 41 TTTGCTCTACTTCAGCTCCTTACCCTTAGGAATCTACTTAC TTTGCTCTACTTCAGCTCCTTGCCCTTAGGAATCTACTTAC < 41bp 0.833206802445172 0.433218879555225 0.3158357 0.12496981 prediction 0.666413604890344 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977940 chr6:13977941 synonymous SNV . 0 22 hPsi_associated_SNPs_4891 0 0 1 0 0 chromatin 0.438956365587725 0.44141533770679 0 0 hPsi_site_10308 iPseU_CNN:0;iRNA_PseU:0 10309 chr1 238090788 238090788 1 + A G rs558615022 238090787 + 238090767 238090807 41 ACATCAGGGAGAAGCTGTGCTACATCACCCTGGACTTCGAG ACATCAGGGAGAAGCTGTGCTGCATCACCCTGGACTTCGAG < 41bp 0.870689266242426 0.537488573927749 0.50224686 0.24062389 prediction 0.666401384629354 Functional Loss - LOC100130331 ENSG00000237250;ENSG00000243781 ncRNA_exonic Human other chr1:238090787 chr1:238090788 . . 0 22 hPsi_associated_SNPs_4892 0 0 0 0 0 unknown 0.438718813844855 0.438718832303404 0.00449371999999992 0 hPsi_site_10309 iPseU_CNN:0.00449371999999992;iRNA_PseU:0 10310 chr14 19378395 19378395 1 + A G BRCA 19378394 + 19378374 19378414 41 GCTGTGGTATCACTGTGCTATAGCTCTCTTATGGTCATGTA GCTGTGGTATCACTGTGCTATGGCTCTCTTATGGTCATGTA < 41bp 0.833170449764784 0.44799473453817 0.28046587 0.18548137 prediction 0.666340899529568 Functional Loss - OR11H12 ENSG00000257115 CDS Human protein_coding chr14:19378394 chr14:19378395 nonsynonymous SNV 0.069 0 22 hPsi_associated_SNPs_4893 0 0 0 0 0 unknown 0.438740637063448 0.438686027563314 0 0 hPsi_site_10310 iPseU_CNN:0;iRNA_PseU:0 10311 chr10 118957097 118957097 1 + A G LAML 118957096 + 118957076 118957116 41 TCCTCTGCTTTCTGGTGACCTACGCCCTGGTGGGTGCTGTG TCCTCTGCTTTCTGGTGACCTGCGCCCTGGTGGGTGCTGTG < 41bp 0.833169836676995 0.439174136561616 0.47169998 0.17201605 prediction 0.666339673353991 Functional Loss - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118957096 chr10:118957097 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_4894 0 0 0 0 0 unknown 0.440125455454395 0.439200136739152 0 0 hPsi_site_10311 iPseU_CNN:0;iRNA_PseU:0 10312 chr7 136699875 136699875 1 + A C SKCM 136699874 + 136699854 136699894 41 CCCTCTACACTGTGATTGGTTACTGGCCTTTGGGACCTGTG CCCTCTACACTGTGATTGGTTCCTGGCCTTTGGGACCTGTG < 41bp 0.850099406734538 0.516941327740279 0.70060694 0.27680075 prediction 0.666316157988516 Functional Loss - CHRM2 ENSG00000181072 CDS Human protein_coding chr7:136699874 chr7:136699875 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4895 0 0 0 0 0 exosome 0.437972340268994 0.438719116567191 0.40121388 0 hPsi_site_10312 iPseU_CNN:0.40121388;iRNA_PseU:0 10313 chr7 66416082 66416082 1 + A G LGG 66416081 + 66416061 66416101 41 AGGGGGCCATTGGAAAAGTCTATCATGCTTTAAATCCCAAG AGGGGGCCATTGGAAAAGTCTGTCATGCTTTAAATCCCAAG < 41bp 0.833146756800385 0.444135968549771 0.33179003 0.19827065 prediction 0.666293513600769 Functional Loss - TMEM248 ENSG00000106609 CDS Human protein_coding chr7:66416081 chr7:66416082 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4896 0 0 1 0 1 Ribosome 0.438718572708458 0.438718330826731 0 0 hPsi_site_10313 iPseU_CNN:0;iRNA_PseU:0 10314 chr15 28878839 28878839 1 + A G rs576966304 28878838 + 28878818 28878858 41 TTCTCGGATTACACGCTTCCTATTTGGCAATGAGCACACCG TTCTCGGATTACACGCTTCCTGTTTGGCAATGAGCACACCG < 41bp 0.833124743000436 0.469324923746628 0.6495975 0.3799124 prediction 0.666249486000871 Functional Loss - HERC2P11;HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28878838 chr15:28878839 . . 0 22 hPsi_associated_SNPs_4897 0 0 1 0 1 unknown 0.438714005172674 0.438718446030953 0.299195 0 hPsi_site_10314 iPseU_CNN:0.299195;iRNA_PseU:0 10315 chr17 15641632 15641632 1 + A G rs536344534 15641631 + 15641611 15641651 41 CAAAGTCATTCCCCTGGCGGTACGGGGCCGGGCGTGGTCAC CAAAGTCATTCCCCTGGCGGTGCGGGGCCGGGCGTGGTCAC < 41bp 0.903505173439732 0.570405092756375 0.63284767 0.20826378 prediction 0.666200161366714 Functional Loss - TBC1D26 ENSG00000214946 CDS Human protein_coding chr17:15641631 chr17:15641632 synonymous SNV . 0 22 hPsi_associated_SNPs_4898 0 0 0 0 2 exosome 0.438718592995103 0.43871859299632 0.26569534 0 hPsi_site_10315 iPseU_CNN:0.26569534;iRNA_PseU:0 10316 chr1 183502880 183502880 1 + A G rs143340793 183502879 + 183502859 183502899 41 AGGAGGAGTCCTACAATGCCTATCCTCTTCCAGCAGTCAAG AGGAGGAGTCCTACAATGCCTGTCCTCTTCCAGCAGTCAAG < 41bp 0.833069069210866 0.420529087049436 0.31198603 0.260749 prediction 0.666138138421731 Functional Loss - SMG7 ENSG00000116698 CDS Human protein_coding chr1:183502879 chr1:183502880 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_4899 0 0 1 0 1 Cytosol 0.438718971315096 0.438713369835505 0 0 hPsi_site_10316 iPseU_CNN:0;iRNA_PseU:0 10317 chr4 83369113 83369113 1 + A G GBM 83369112 + 83369092 83369132 41 TCGAAGAAAATGTTAAAGAGTATCTGCAGACACATTGGGAA TCGAAGAAAATGTTAAAGAGTGTCTGCAGACACATTGGGAA < 41bp 0.891344765922265 0.558276658703961 0.32764655 0.27048776 prediction 0.666136214436609 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83369112 chr4:83369113 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_4900 0 0 1 0 2 Ribosome 0.438512164512673 0.43755309375018 0 0 hPsi_site_10317 iPseU_CNN:0;iRNA_PseU:0 10318 chr9 139820363 139820363 1 + A G rs17250680 139820362 + 139820342 139820382 41 ACAGGGCTCTAACTGCCCCCTACTGGTGTCTGGGGGTTGGG ACAGGGCTCTAACTGCCCCCTGCTGGTGTCTGGGGGTTGGG < 41bp 0.833064576386218 0.44444852111512 0.2199102 0.17375043 prediction 0.666129152772436 Functional Loss - TRAF2 ENSG00000127191 UTR3 Human protein_coding chr9:139820362 chr9:139820363 . . 0 22 hPsi_associated_SNPs_4901 0 0 1 0 0 Ribosome 0.438718600117089 0.438718593257478 0 0 hPsi_site_10318 iPseU_CNN:0;iRNA_PseU:0 10319 chr1 207867788 207867788 1 + A G STAD 207867787 + 207867767 207867807 41 ACTATGGATCAGTGGTGACCTACCACTGCAATCTTGGAAGC ACTATGGATCAGTGGTGACCTGCCACTGCAATCTTGGAAGC < 41bp 0.833050264698694 0.438032442414916 0.33733177 0.2168312 prediction 0.666100529397387 Functional Loss - CR1L ENSG00000197721 CDS Human protein_coding chr1:207867787 chr1:207867788 nonsynonymous SNV 0.458 3 22 hPsi_associated_SNPs_4902 0 0 0 0 1 Endoplasmic reticulum 0.438486547485444 0.43938421819194 0 0 hPsi_site_10319 iPseU_CNN:0;iRNA_PseU:0 10320 chr3 147130434 147130434 1 + A G READ 147130433 + 147130413 147130453 41 GCAAGATGTGCGACAAGTCCTACACGCATCCCAGTTCGCTG GCAAGATGTGCGACAAGTCCTGCACGCATCCCAGTTCGCTG < 41bp 0.83304892363722 0.422569676408246 0.8011811 0.26841193 prediction 0.66609784727444 Functional Loss - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147130433 chr3:147130434 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4903 0 0 0 0 1 exosome 0.438657235175579 0.438789899703439 0.6023622 0 hPsi_site_10320 iPseU_CNN:0.6023622;iRNA_PseU:0 10321 chr1 99771388 99771388 1 + A G LUAD 99771387 + 99771367 99771407 41 AGCAGTGATGGAATTGCTCATACAGAAGGCATCCTCAACCG AGCAGTGATGGAATTGCTCATGCAGAAGGCATCCTCAACCG < 41bp 0.887851775957552 0.554805480376782 0.77787614 0.29773802 prediction 0.66609259116154 Functional Loss - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99771387 chr1:99771388 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_4904 0 0 0 0 0 exosome 0.439471583311649 0.441475552386776 0.55575228 0 hPsi_site_10321 iPseU_CNN:0.55575228;iRNA_PseU:0 10322 chr18 33557466 33557466 1 + A G rs2276314 33557465 + 33557445 33557485 41 AAGAGCAATCCTGCCACTCCTACAAGTAAACTCAGCCTGAA AAGAGCAATCCTGCCACTCCTGCAAGTAAACTCAGCCTGAA < 41bp 0.83304060504823 0.438717777045948 0.38536394 0.23974514 prediction 0.66608121009646 Functional Loss - C18orf21 ENSG00000141428 CDS Human protein_coding chr18:33557465 chr18:33557466 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4905 0 1 1 0 2 Cytosol 0.438718592995274 0.438718592995106 0 0 hPsi_site_10322 iPseU_CNN:0;iRNA_PseU:0 10323 chr1 153730145 153730145 1 + A G CESC 153730144 + 153730124 153730164 41 TGCGCTGTGACCTCATTCGCTACATCTGTGGGGTAGTCCAC TGCGCTGTGACCTCATTCGCTGCATCTGTGGGGTAGTCCAC < 41bp 0.833017467768418 0.426118451013599 0.33538133 0.23736289 prediction 0.666034935536836 Functional Loss - INTS3 ENSG00000143624 CDS Human protein_coding chr1:153730144 chr1:153730145 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4906 0 0 0 0 1 chromatin 0.436356367557394 0.436385829269124 0 0 hPsi_site_10323 iPseU_CNN:0;iRNA_PseU:0 10324 chr2 27728656 27728656 1 + A G rs61734462 27728655 + 27728635 27728675 41 GATTCTGCTGGAAACCCTGTTATTAGCAGCCCATAAGACTG GATTCTGCTGGAAACCCTGTTGTTAGCAGCCCATAAGACTG < 41bp 0.905559408565101 0.57254378401732 0.4696826 0.29142553 prediction 0.666031249095562 Functional Loss - GCKR ENSG00000084734 CDS Human protein_coding chr2:27728655 chr2:27728656 synonymous SNV . 0 22 hPsi_associated_SNPs_4907 0 0 0 0 2 cytosol 0.438717499307903 0.438715709931088 0 0 hPsi_site_10324 iPseU_CNN:0;iRNA_PseU:0 10325 chr6 44220854 44220854 1 + A G UCEC 44220853 + 44220833 44220873 41 ACCTACGGCTGGACAGCCAATATGGAGCGGATCATGAAAGC ACCTACGGCTGGACAGCCAATGTGGAGCGGATCATGAAAGC < 41bp 0.832992231062502 0.417557538322226 0.4353636 0.3512592 prediction 0.665984462125005 Functional Loss - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44220853 chr6:44220854 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4908 0 0 1 0 1 Nucleus 0.438717173545765 0.438718576898689 0 0 hPsi_site_10325 iPseU_CNN:0;iRNA_PseU:0 10326 chr6 10755445 10755445 1 + A G LUAD 10755444 + 10755424 10755464 41 CTATGGAAAATTCATGCCTGTAGGTTTAATTGCAGGTGCCA CTATGGAAAATTCATGCCTGTGGGTTTAATTGCAGGTGCCA < 41bp 0.832963683888689 0.458567382035793 0.45230773 0.15852314 prediction 0.665927367777378 Functional Loss - TMEM14B ENSG00000137210 CDS Human protein_coding chr6:10755444 chr6:10755445 nonsynonymous SNV 0.957 0 22 hPsi_associated_SNPs_4909 0 0 1 0 2 Ribosome 0.438718547524703 0.438718640497343 0 0 hPsi_site_10326 iPseU_CNN:0;iRNA_PseU:0 10327 chr3 196387895 196387895 1 + A G UCEC 196387894 + 196387874 196387914 41 AGCTGTGTGGATTTCAGGAATATGGCATCTTTAAGGAGCCT AGCTGTGTGGATTTCAGGAATGTGGCATCTTTAAGGAGCCT < 41bp 0.888783919715737 0.555824678605855 0.6539595 0.5626971 prediction 0.665918482219765 Functional Loss - NRROS ENSG00000174004 CDS Human protein_coding chr3:196387894 chr3:196387895 nonsynonymous SNV 0.306 0 22 hPsi_associated_SNPs_4910 0 0 0 0 0 chromatin 0.438718629998942 0.438718645733843 0.1825248 0 hPsi_site_10327 iPseU_CNN:0.1825248;iRNA_PseU:0 10328 chr19 11031423 11031423 1 + A C SKCM 11031422 + 11031402 11031442 41 GATCTGAAAAACCCCTTCTTTAGGTAGGAGGGGCCCCTTGC GATCTGAAAAACCCCTTCTTTCGGTAGGAGGGGCCCCTTGC < 41bp 0.853082042117562 0.520130161210874 0.52385277 0.39401928 prediction 0.665903761813376 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11031422 chr19:11031423 synonymous SNV . 0 22 hPsi_associated_SNPs_4911 0 0 1 0 2 Ribosome 0.438718604764614 0.438710553321921 0.0477055399999999 0 hPsi_site_10328 iPseU_CNN:0.0477055399999999;iRNA_PseU:0 10329 chr4 55593667 55593667 1 + A G TGCT 55593666 + 55593646 55593686 41 TAGACCCAACACAACTTCCTTATGATCACAAATGGGAGTTT TAGACCCAACACAACTTCCTTGTGATCACAAATGGGAGTTT < 41bp 0.832951820883575 0.436029647974303 0.43204063 0.2468712 prediction 0.66590364176715 Functional Loss - KIT ENSG00000157404 CDS Human protein_coding chr4:55593666 chr4:55593667 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_4912 0 0 1 0 1 Endoplasmic reticulum 0.438399335968244 0.438632356946867 0 0 hPsi_site_10329 iPseU_CNN:0;iRNA_PseU:0 10330 chr8 97620648 97620648 1 + A G BLCA 97620647 + 97620627 97620667 41 CCGAAGAGGATACAAATGTGTATACTGAGAAACACTCAGAC CCGAAGAGGATACAAATGTGTGTACTGAGAAACACTCAGAC < 41bp 0.832951722522421 0.420375418758811 0.7049427 0.2038506 prediction 0.665903445044842 Functional Loss - SDC2 ENSG00000169439 CDS Human protein_coding chr8:97620647 chr8:97620648 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_4913 0 0 1 0 2 Ribosome 0.439998468189825 0.441297049985125 0.4098854 0 hPsi_site_10330 iPseU_CNN:0.4098854;iRNA_PseU:0 10331 chr3 44948497 44948497 1 + A G LUAD 44948496 + 44948476 44948516 41 ATCCGCAAAGGTGACATCTTTATTGTCTATGACACCAGATT ATCCGCAAAGGTGACATCTTTGTTGTCTATGACACCAGATT < 41bp 0.83293532904661 0.440408877406649 0.40348598 0.31257224 prediction 0.665870658093219 Functional Loss - TGM4 ENSG00000163810 CDS Human protein_coding chr3:44948496 chr3:44948497 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_4914 0 0 0 0 1 exosome 0.438645792449145 0.43793712279905 0 0 hPsi_site_10331 iPseU_CNN:0;iRNA_PseU:0 10332 chr17 58740709 58740709 1 + A G UCEC 58740708 + 58740688 58740728 41 AACAAACTTTAAAAGGACATTAGAAGAGTCCAATTCTGGCC AACAAACTTTAAAAGGACATTGGAAGAGTCCAATTCTGGCC < 41bp 0.832896547230114 0.445036596778001 0.4814168 0.5071202 prediction 0.665793094460227 Functional Loss - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58740708 chr17:58740709 synonymous SNV . 0 22 hPsi_associated_SNPs_4915 0 0 1 0 0 Cytosol 0.438718290763597 0.438718616547512 0 0 hPsi_site_10332 iPseU_CNN:0;iRNA_PseU:0 10333 chrX 38525531 38525531 1 + A G LUSC 38525530 + 38525510 38525550 41 GGCCTGTTTGGATGCTTTGCTACATGTCGTGGTAGCCCATG GGCCTGTTTGGATGCTTTGCTGCATGTCGTGGTAGCCCATG < 41bp 0.832862870401238 0.421478756567471 0.6747315 0.19108614 prediction 0.665725740802475 Functional Loss - TSPAN7 ENSG00000156298;ENSG00000250349 CDS Human other chrX:38525530 chrX:38525531 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_4916 0 0 1 0 1 Ribosome 0.438871231602694 0.438703130976379 0.349463 0 hPsi_site_10333 iPseU_CNN:0.349463;iRNA_PseU:0 10334 chr1 23406112 23406112 1 + A G UCEC 23406111 + 23406091 23406131 41 TTGTTCGGGCATGTTGGCAGTACGACTGCCAGCAGGGGTGA TTGTTCGGGCATGTTGGCAGTGCGACTGCCAGCAGGGGTGA < 41bp 0.898762420487032 0.565915416219392 0.6692204 0.302903 prediction 0.66569400853528 Functional Loss - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23406111 chr1:23406112 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_4917 0 0 1 0 2 Cytosol 0.437951676271686 0.438864825696447 0.3384408 0 hPsi_site_10334 iPseU_CNN:0.3384408;iRNA_PseU:0 10335 chr9 125281665 125281665 1 + A G HNSC 125281664 + 125281644 125281684 41 TGTCACTGTCCCAAAGATGTTATTAAGCATGCAAACTCAGG TGTCACTGTCCCAAAGATGTTGTTAAGCATGCAAACTCAGG < 41bp 0.832836475463636 0.446535362638946 0.2823823 0.25388402 prediction 0.665672950927271 Functional Loss - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125281664 chr9:125281665 synonymous SNV . 0 22 hPsi_associated_SNPs_4918 0 0 0 0 0 exosome 0.438719090972702 0.438718623113717 0 0 hPsi_site_10335 iPseU_CNN:0;iRNA_PseU:0 10336 chr8 110100264 110100264 1 + A G UCEC 110100263 + 110100243 110100283 41 ATTAGCACCTACAAAGATGCTATTGTGATATCCTGTGGCTA ATTAGCACCTACAAAGATGCTGTTGTGATATCCTGTGGCTA < 41bp 0.832834353518175 0.444058257372688 0.5064529 0.3091362 prediction 0.66566870703635 Functional Loss - TRHR ENSG00000174417 CDS Human protein_coding chr8:110100263 chr8:110100264 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_4919 0 0 0 0 0 exosome 0.435654072754512 0.435982587785572 0.0129058 0 hPsi_site_10336 iPseU_CNN:0.0129058;iRNA_PseU:0 10337 chr17 56247411 56247411 1 + A G LIHC 56247410 + 56247390 56247430 41 CCATCTCCCGGCCCCTCCGCTATGTCACCGTCATGAACACT CCATCTCCCGGCCCCTCCGCTGTGTCACCGTCATGAACACT < 41bp 0.893730022116293 0.560902391835596 0.37148666 0.3985712 prediction 0.665655260561395 Functional Loss - OR4D2 ENSG00000255713 CDS Human protein_coding chr17:56247410 chr17:56247411 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_4920 0 0 0 0 0 unknown 0.438718125191784 0.438718567308964 0 0 hPsi_site_10337 iPseU_CNN:0;iRNA_PseU:0 10338 chr22 20130367 20130367 1 + A G UCEC 20130366 + 20130346 20130386 41 CGAGCCTGGACCTCCCTGACTATGGGCCAGGGGGCCTGCAT CGAGCCTGGACCTCCCTGACTGTGGGCCAGGGGGCCTGCAT < 41bp 0.895251164661509 0.562474791885904 0.5270441 0.31613123 prediction 0.66555274555121 Functional Loss - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20130366 chr22:20130367 nonsynonymous SNV 0.300 2 22 hPsi_associated_SNPs_4921 0 0 1 0 1 Endoplasmic reticulum 0.438721092015937 0.438752083436133 0.0540882 0 hPsi_site_10338 iPseU_CNN:0.0540882;iRNA_PseU:0 10339 chr17 8225178 8225178 1 + A G rs181692039 8225177 + 8225157 8225197 41 TGGCAGTTGCAGGGCAATGTTATGGAGCAGCCAACGGCCTG TGGCAGTTGCAGGGCAATGTTGTGGAGCAGCCAACGGCCTG < 41bp 0.873582086383951 0.540808131566847 0.4687805 0.36666018 prediction 0.665547909634208 Functional Loss - ARHGEF15 ENSG00000198844 UTR3 Human protein_coding chr17:8225177 chr17:8225178 . . 0 22 hPsi_associated_SNPs_4922 0 0 0 0 0 exosome 0.438729388904315 0.438556276875466 0 0 hPsi_site_10339 iPseU_CNN:0;iRNA_PseU:0 10340 chr16 57601914 57601914 1 + A G UCEC 57601913 + 57601893 57601933 41 CTCTGGCCGCTGCCCTGCACTACGCGCTGCTCAGCTGCCTC CTCTGGCCGCTGCCCTGCACTGCGCGCTGCTCAGCTGCCTC < 41bp 0.832765793840678 0.41523034961652 0.75908804 0.3533401 prediction 0.665531587681357 Functional Loss - ADGRG5 ENSG00000159618 CDS Human protein_coding chr16:57601913 chr16:57601914 nonsynonymous SNV 0.013 3 22 hPsi_associated_SNPs_4923 0 0 0 0 0 Ribosome 0.438856760708119 0.438671488372978 0.51817608 0 hPsi_site_10340 iPseU_CNN:0.51817608;iRNA_PseU:0 10341 chr14 20248660 20248660 1 + A G BLCA 20248659 + 20248639 20248679 41 CTCATCTGACTTCTCCTATGTATTTCCTGTTGGCTAATCTG CTCATCTGACTTCTCCTATGTGTTTCCTGTTGGCTAATCTG < 41bp 0.878100016046201 0.54536061039579 0.51455677 0.23797515 prediction 0.665478811300822 Functional Loss - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20248659 chr14:20248660 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4924 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.02911354 0 hPsi_site_10341 iPseU_CNN:0.02911354;iRNA_PseU:0 10342 chr21 46117648 46117648 1 + A G COAD 46117647 + 46117627 46117667 41 TCTCTGTGCTGCCAGCAGTCTAGCTGCCAGCCAGCTTGCTG TCTCTGTGCTGCCAGCAGTCTGGCTGCCAGCCAGCTTGCTG < 41bp 0.832707321294955 0.453091111210035 0.43780184 0.2371484 prediction 0.66541464258991 Functional Loss - KRTAP10-12 ENSG00000189169 CDS Human protein_coding chr21:46117647 chr21:46117648 nonsynonymous SNV 0.737 0 22 hPsi_associated_SNPs_4925 0 0 0 0 0 unknown 0.435646779532023 0.438554674310522 0 0 hPsi_site_10342 iPseU_CNN:0;iRNA_PseU:0 10343 chr12 122064832 122064832 1 + A G LAML 122064831 + 122064811 122064851 41 CGGACTGGATCGGCCAGAGTTACTCCGAGGTGATGAGCCTC CGGACTGGATCGGCCAGAGTTGCTCCGAGGTGATGAGCCTC < 41bp 0.884121124559609 0.551417883853089 0.79555005 0.3176814 prediction 0.66540648141304 Functional Loss - ORAI1 ENSG00000182500 CDS Human other chr12:122064831 chr12:122064832 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_4926 0 0 1 0 0 Endoplasmic reticulum 0.435399476588825 0.435282629003565 0.5911001 0 hPsi_site_10343 iPseU_CNN:0.5911001;iRNA_PseU:0 10344 chr3 25832761 25832761 1 + A C rs143066680 25832760 + 25832740 25832780 41 GTTGGTGAAGAGTATAAGAGTATCCCTTGCAGTGTTGCTGC GTTGGTGAAGAGTATAAGAGTCTCCCTTGCAGTGTTGCTGC < 41bp 0.858370781502888 0.52567315770339 0.41768798 0.31327823 prediction 0.665395247598997 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25832760 chr3:25832761 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_4927 0 0 1 0 1 Ribosome 0.438117298317059 0.439435257650059 0 0 hPsi_site_10344 iPseU_CNN:0;iRNA_PseU:0 10345 chr8 72968043 72968043 1 + A G STAD 72968042 + 72968022 72968062 41 ACATGCATAATGTAGAGGAGTACACCCATCGTTGTCTTCAT ACATGCATAATGTAGAGGAGTGCACCCATCGTTGTCTTCAT < 41bp 0.876676864134697 0.54398541286037 0.736043 0.34034407 prediction 0.665382902548654 Functional Loss - TRPA1 ENSG00000104321 CDS Human protein_coding chr8:72968042 chr8:72968043 synonymous SNV . 0 22 hPsi_associated_SNPs_4928 0 0 0 0 0 chromatin 0.438774726758624 0.438721526472263 0.472086 0 hPsi_site_10345 iPseU_CNN:0.472086;iRNA_PseU:0 10346 chr21 34924619 34924619 1 + A G UCEC 34924618 + 34924598 34924638 41 GAGCGGTCTATGATGTCCCCTATGGCTGAACGCTCTATGAT GAGCGGTCTATGATGTCCCCTGTGGCTGAACGCTCTATGAT < 41bp 0.832672196071414 0.450958259913398 0.3563931 0.26411334 prediction 0.665344392142827 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34924618 chr21:34924619 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4929 0 0 1 0 0 Nucleus 0.439662672808268 0.438491151766656 0 0 hPsi_site_10346 iPseU_CNN:0;iRNA_PseU:0 10347 chr17 25636254 25636254 1 + A C OV 25636253 + 25636233 25636273 41 TGCATCTTATGATACTCGAGTATATATCTGGGATCCACATA TGCATCTTATGATACTCGAGTCTATATCTGGGATCCACATA < 41bp 0.835734157845889 0.50307161641583 0.33124793 0.26885313 prediction 0.665325082860119 Functional Loss - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25636253 chr17:25636254 synonymous SNV . 0 22 hPsi_associated_SNPs_4930 0 0 1 1 0 Cytosol 0.438718734039942 0.438719077421255 0 0 hPsi_site_10347 iPseU_CNN:0;iRNA_PseU:0 10348 chr11 93528169 93528169 1 + A G HNSC 93528168 + 93528148 93528188 41 TCTCGGGAAGCTGTTCAAATTAAATCACAAGTCCCTCACAT TCTCGGGAAGCTGTTCAAATTGAATCACAAGTCCCTCACAT < 41bp 0.894346516271736 0.561697875814376 0.6681608 0.3713696 prediction 0.665297280914718 Functional Loss - MED17 ENSG00000042429 CDS Human protein_coding chr11:93528168 chr11:93528169 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4931 0 0 1 0 2 Cytosol 0.438162638069595 0.438881585195228 0.3363216 0 hPsi_site_10348 iPseU_CNN:0.3363216;iRNA_PseU:0 10349 chr6 26217496 26217496 1 + A G COAD 26217495 + 26217475 26217515 41 CGAGGAGCTAAATAAGCTTCTAGGTCGCGTGACCATCGCGC CGAGGAGCTAAATAAGCTTCTGGGTCGCGTGACCATCGCGC < 41bp 0.876087718183679 0.543442344943796 0.4565198 0.30443388 prediction 0.665290746479764 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217495 chr6:26217496 synonymous SNV . 0 22 hPsi_associated_SNPs_4932 0 0 1 0 0 Nucleus 0.438708942619769 0.438718811364941 0 0 hPsi_site_10349 iPseU_CNN:0;iRNA_PseU:0 10350 chr10 112361863 112361863 1 + A G UCEC 112361862 + 112361842 112361882 41 AAGAAGAGTTAGATAGGGGTTACAAATCAATCATGGAACTG AAGAAGAGTTAGATAGGGGTTGCAAATCAATCATGGAACTG < 41bp 0.885593572224523 0.552970009334162 0.44215545 0.20628285 prediction 0.665247125780722 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361862 chr10:112361863 nonsynonymous SNV 0.949 1 22 hPsi_associated_SNPs_4933 0 0 1 0 1 Ribosome 0.439302594256787 0.42685407402769 0 0 hPsi_site_10350 iPseU_CNN:0;iRNA_PseU:0 10351 chr6 27925394 27925394 1 + A G rs143223456 27925393 + 27925373 27925413 41 TCCTTTGATAGGTTTGTAGCTATTTGTCGGCCTCTCCATTA TCCTTTGATAGGTTTGTAGCTGTTTGTCGGCCTCTCCATTA < 41bp 0.832614494928492 0.459599853148581 0.31343895 0.20220903 prediction 0.665228989856984 Functional Loss - OR2B6 ENSG00000124657 CDS Human protein_coding chr6:27925393 chr6:27925394 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_4934 0 0 0 0 0 nucleolus 0.438718184734334 0.43871844411808 0 0 hPsi_site_10351 iPseU_CNN:0;iRNA_PseU:0 10352 chr19 53960186 53960186 1 + A G UCEC 53960185 + 53960165 53960205 41 GTGAAGAATGTCACAAAGTTTACAGTCGCACATCAAACCGT GTGAAGAATGTCACAAAGTTTGCAGTCGCACATCAAACCGT < 41bp 0.865064668916781 0.532450770782899 0.2806257 0.23031765 prediction 0.665227796267764 Functional Loss - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53960185 chr19:53960186 . . 0 22 hPsi_associated_SNPs_4935 0 0 1 0 0 unknown 0.438663105580298 0.436623487858197 0 0 hPsi_site_10352 iPseU_CNN:0;iRNA_PseU:0 10353 chr9 114695274 114695274 1 + A G UCEC 114695273 + 114695253 114695293 41 AGCAGAGGAAATCCTAGATGTATAACTACAGCTTTGTGACT AGCAGAGGAAATCCTAGATGTGTAACTACAGCTTTGTGACT < 41bp 0.889706198254511 0.557099260698694 0.50426096 0.28423417 prediction 0.665213875111635 Functional Loss - UGCG ENSG00000148154 CDS Human protein_coding chr9:114695273 chr9:114695274 synonymous SNV . 0 22 hPsi_associated_SNPs_4936 0 0 1 0 0 Ribosome 0.438718578383964 0.438718693383822 0.00852191999999996 0 hPsi_site_10353 iPseU_CNN:0.00852191999999996;iRNA_PseU:0 10354 chr17 12647585 12647585 1 + A G KIRC 12647584 + 12647564 12647604 41 AGAAGCTTAAATATCACCAGTACATTCCCCCAGACCAGAAG AGAAGCTTAAATATCACCAGTGCATTCCCCCAGACCAGAAG < 41bp 0.901942506178093 0.569336229999527 0.7960155 0.40484738 prediction 0.665212552357132 Functional Loss - MYOCD ENSG00000141052;ENSG00000273452 CDS Human other chr17:12647584 chr17:12647585 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_4937 0 0 0 0 0 exosome 0.438683868286007 0.438712935663657 0.592031 0 hPsi_site_10354 iPseU_CNN:0.592031;iRNA_PseU:0 10355 chr19 35330105 35330105 1 + A G rs143465088 35330104 + 35330084 35330124 41 CCAGACCGGCCCCTGCGCGATATGAGCACCGCTCAGGACTG CCAGACCGGCCCCTGCGCGATGTGAGCACCGCTCAGGACTG < 41bp 0.857741032010752 0.525151145889931 0.36964005 0.38241524 prediction 0.665179772241642 Functional Loss - LINC01801;LINC00904 ENSG00000269086 ncRNA_exonic Human lincRNA chr19:35330104 chr19:35330105 . . 0 22 hPsi_associated_SNPs_4938 0 0 0 0 0 unknown 0.438632572870257 0.438639405209488 0 0 hPsi_site_10355 iPseU_CNN:0;iRNA_PseU:0 10356 chr11 5776344 5776344 1 + A G LUAD 5776343 + 5776323 5776363 41 TGCTTATGGCCCTGGATCGCTATGTGGCCATCTGCTACCCC TGCTTATGGCCCTGGATCGCTGTGTGGCCATCTGCTACCCC < 41bp 0.889923132387796 0.557348294882567 0.91379356 0.7998496 prediction 0.665149675010458 Functional Loss - OR52N4 ENSG00000181074 CDS Human protein_coding chr11:5776343 chr11:5776344 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_4939 0 0 0 0 0 exosome 0.438764246741531 0.438730051371207 0.22788792 0 hPsi_site_10356 iPseU_CNN:0.22788792;iRNA_PseU:0 10357 chr3 97983952 97983952 1 + A G rs551219932 97983951 + 97983931 97983971 41 ATGGCCCCCTCACCTTCAAATATCTGGGCTCTGCATCTCCG ATGGCCCCCTCACCTTCAAATGTCTGGGCTCTGCATCTCCG < 41bp 0.864501616597773 0.531927707946017 0.31549463 0.25222915 prediction 0.665147817303511 Functional Loss - OR5H6 ENSG00000230301 CDS Human protein_coding chr3:97983951 chr3:97983952 nonsynonymous SNV 0.013 2 22 hPsi_associated_SNPs_4940 0 0 0 0 0 unknown 0.438783241503231 0.439481919432027 0 0 hPsi_site_10357 iPseU_CNN:0;iRNA_PseU:0 10358 chr12 81112654 81112654 1 + A G BLCA 81112653 + 81112633 81112673 41 TCCTTAGTATATGCCACAGATAAAAACTCCTTATCCAGCTT TCCTTAGTATATGCCACAGATGAAAACTCCTTATCCAGCTT < 41bp 0.832569425968698 0.459218411497595 0.27527142 0.1839765 prediction 0.665138851937396 Functional Loss - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81112653 chr12:81112654 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_4941 0 0 0 0 1 unknown 0.440513872686858 0.440145208315567 0 0 hPsi_site_10358 iPseU_CNN:0;iRNA_PseU:0 10359 chr19 4792908 4792908 1 + T C LIHC 4792909 - 4792889 4792929 41 TGACCTCCCTGGAATAGTCATAGGCCAGGACCAGCTGTGGG TGACCTCCCTGGAATAGTCATGGGCCAGGACCAGCTGTGGG < 41bp 0.878215786218781 0.545670873671594 0.5139076 0.31372893 prediction 0.665089825094373 Functional Loss - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4792909 chr19:4792908 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_4942 0 0 0 0 0 Ribosome 0.438764722332996 0.438718033440294 0.0278152 0 hPsi_site_10359 iPseU_CNN:0.0278152;iRNA_PseU:0 10360 chr11 16774399 16774399 1 + A G LIHC 16774398 + 16774378 16774418 41 GCAAAGTATGGACAGTAAATTATCAGGAAGATATCGGCGAC GCAAAGTATGGACAGTAAATTGTCAGGAAGATATCGGCGAC < 41bp 0.832513740604392 0.454418233818495 0.5433854 0.2774788 prediction 0.665027481208784 Functional Loss - C11orf58 ENSG00000110696 CDS Human protein_coding chr11:16774398 chr11:16774399 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_4943 0 0 1 0 2 Ribosome 0.438718572930456 0.438718347110783 0.0867708 0 hPsi_site_10360 iPseU_CNN:0.0867708;iRNA_PseU:0 10361 chr14 65398907 65398907 1 + A G LIHC 65398906 + 65398886 65398926 41 AAAGCCGAAGATACTATCAGTATTCTCCCTGATGACCCCCG AAAGCCGAAGATACTATCAGTGTTCTCCCTGATGACCCCCG < 41bp 0.832487159143412 0.451184644628075 0.8085983 0.7849315 prediction 0.664974318286824 Functional Loss - CHURC1 ENSG00000125954;ENSG00000258289 CDS Human other chr14:65398906 chr14:65398907 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4944 0 0 1 0 1 Ribosome 0.438739979172097 0.438871439004454 0.0473336 0 hPsi_site_10361 iPseU_CNN:0.0473336;iRNA_PseU:0 10362 chr22 39387431 39387431 1 + A G UCEC 39387430 + 39387410 39387450 41 AGTTGGACCCGGCCCAGATCTACAGGGTCACTTGGTTCATC AGTTGGACCCGGCCCAGATCTGCAGGGTCACTTGGTTCATC < 41bp 0.832474644379579 0.421176043743116 0.6985811 0.45715344 prediction 0.664949288759157 Functional Loss - APOBEC3B ENSG00000179750 CDS Human protein_coding chr22:39387430 chr22:39387431 nonsynonymous SNV 0.320 3 22 hPsi_associated_SNPs_4945 0 0 0 6 2 exosome 0.438718592995138 0.438718592946436 0.3971622 0 hPsi_site_10362 iPseU_CNN:0.3971622;iRNA_PseU:0 10363 chr19 10745531 10745531 1 + A G COAD 10745530 + 10745510 10745550 41 TTCAGACGGATTTCCGGGTGTACCTGCACTTACGGCAGACC TTCAGACGGATTTCCGGGTGTGCCTGCACTTACGGCAGACC < 41bp 0.904714648967613 0.572247525722608 0.24145007 0.13431159 prediction 0.664934246490009 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10745530 chr19:10745531 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4946 0 0 0 0 1 Ribosome 0.437070325487009 0.438716936172908 0 0 hPsi_site_10363 iPseU_CNN:0;iRNA_PseU:0 10364 chr7 143771704 143771704 1 + A G LUAD 143771703 + 143771683 143771723 41 CCATCTGCCACCCTCTCCGATATTCTACCATCATGACCTGG CCATCTGCCACCCTCTCCGATGTTCTACCATCATGACCTGG < 41bp 0.888907737224761 0.556487981059902 0.7564112 0.54357344 prediction 0.664839512329717 Functional Loss - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771703 chr7:143771704 nonsynonymous SNV 0.018 3 22 hPsi_associated_SNPs_4947 0 0 0 0 0 unknown 0.438718593038952 0.438718592990239 0.42567552 0 hPsi_site_10364 iPseU_CNN:0.42567552;iRNA_PseU:0 10365 chr16 86589797 86589797 1 + A G rs16941535 86589796 + 86589776 86589816 41 ACAGAAAATGGTGTTCCGTGTACAAGCGACTTACTCATGTC ACAGAAAATGGTGTTCCGTGTGCAAGCGACTTACTCATGTC < 41bp 0.832416627348183 0.494712632738043 0.8028244 0.4278907 prediction 0.664833254696366 Functional Loss - FLJ30679 ENSG00000103248 upstream Human protein_coding chr16:86589796 chr16:86589797 . . 0 22 hPsi_associated_SNPs_4948 0 0 0 0 0 unknown 0.438783525870566 0.438735672503663 0.6056488 0 hPsi_site_10365 iPseU_CNN:0.6056488;iRNA_PseU:0 10366 chr16 68225312 68225312 1 + A G OV 68225311 + 68225291 68225331 41 TCGTCTCAGTTACAACCTATTACATATGGTCCTTCACATTC TCGTCTCAGTTACAACCTATTGCATATGGTCCTTCACATTC < 41bp 0.859387453686956 0.5269732849769 0.36864024 0.1954087 prediction 0.664828337420112 Functional Loss - NFATC3 ENSG00000072736 CDS Human protein_coding chr16:68225311 chr16:68225312 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_4949 0 0 1 0 0 Cytosol 0.439026851496054 0.439739139303083 0 0 hPsi_site_10366 iPseU_CNN:0;iRNA_PseU:0 10367 chr12 113532986 113532986 1 + A G PRAD 113532985 + 113532965 113533005 41 CCCAGACCATCCGCATCGTCTATGACATCCCCACAGGCATC CCCAGACCATCCGCATCGTCTGTGACATCCCCACAGGCATC < 41bp 0.832395383984787 0.424697832528583 0.65049267 0.6166954 prediction 0.664790767969574 Functional Loss - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113532985 chr12:113532986 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_4950 0 0 0 0 1 Endoplasmic reticulum 0.429666255980552 0.421769443396917 0.06759454 0 hPsi_site_10367 iPseU_CNN:0.06759454;iRNA_PseU:0 10368 chr5 38921794 38921794 1 + A G KIRC 38921793 + 38921773 38921813 41 AAACCCCAACCTGGAGATGTTATAGGCTATGTTGTGGACTG AAACCCCAACCTGGAGATGTTGTAGGCTATGTTGTGGACTG < 41bp 0.901705964621218 0.569312949479332 0.529837 0.33199114 prediction 0.664786030283773 Functional Loss - OSMR ENSG00000145623 CDS Human protein_coding chr5:38921793 chr5:38921794 nonsynonymous SNV 0.049 0 22 hPsi_associated_SNPs_4951 0 0 1 0 1 Nucleus 0.438726575488148 0.438663454205014 0.059674 0 hPsi_site_10368 iPseU_CNN:0.059674;iRNA_PseU:0 10369 chr12 53581371 53581371 1 + A C rs200684657 53581370 + 53581350 53581390 41 TTCCGACGGGCAGTTTTCTCTATAGGCGCAAGGGGCCCCGG TTCCGACGGGCAGTTTTCTCTCTAGGCGCAAGGGGCCCCGG < 41bp 0.851172154573845 0.518779680461459 0.6932893 0.6388591 prediction 0.664784948224772 Functional Loss - ZNF740 ENSG00000139651 CDS Human protein_coding chr12:53581370 chr12:53581371 synonymous SNV . 0 22 hPsi_associated_SNPs_4952 0 0 1 0 0 Ribosome 0.4387185929885 0.438718592995607 0.1088604 0 hPsi_site_10369 iPseU_CNN:0.1088604;iRNA_PseU:0 10370 chr9 140040257 140040257 1 + A G COAD 140040256 + 140040236 140040276 41 GGTTTGAGATGATGCGTGTCTACAGCTGGAACCACATCATC GGTTTGAGATGATGCGTGTCTGCAGCTGGAACCACATCATC < 41bp 0.832388793736779 0.490531733848322 0.74095994 0.38297364 prediction 0.664777587473557 Functional Loss - GRIN1 ENSG00000176884 CDS Human protein_coding chr9:140040256 chr9:140040257 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_4953 0 0 1 0 2 exosome 0.438770559693871 0.438720387925508 0.48191988 0 hPsi_site_10370 iPseU_CNN:0.48191988;iRNA_PseU:0 10371 chr6 132874410 132874410 1 + A G rs148342485 132874409 + 132874389 132874429 41 AGGTGGCTGTCAAATTATTGTAAGTCAAGGCTGGGTGTTGA AGGTGGCTGTCAAATTATTGTGAGTCAAGGCTGGGTGTTGA < 41bp 0.873791800493948 0.541411875936265 0.32738733 0.19482395 prediction 0.664759849115365 Functional Loss - TAAR8 ENSG00000146385 CDS Human protein_coding chr6:132874409 chr6:132874410 synonymous SNV . 0 22 hPsi_associated_SNPs_4954 0 0 0 0 0 unknown 0.43942840637908 0.438716775334945 0 0 hPsi_site_10371 iPseU_CNN:0;iRNA_PseU:0 10372 chr3 52526152 52526152 1 + A C HNSC 52526151 + 52526131 52526171 41 TGGATGAGGACTGTGTCCACTACCCACTGCCCGAGTTTGCC TGGATGAGGACTGTGTCCACTCCCCACTGCCCGAGTTTGCC < 41bp 0.8323301598735 0.479041525877154 0.35757586 0.24642578 prediction 0.664660319747 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526151 chr3:52526152 nonsynonymous SNV 0.632 3 22 hPsi_associated_SNPs_4955 0 0 1 5 1 Cytosol 0.439074977328943 0.438561971081733 0 0 hPsi_site_10372 iPseU_CNN:0;iRNA_PseU:0 10373 chr11 55606501 55606501 1 + A G GBM 55606500 + 55606480 55606520 41 GTGAACCTGGTTGTAGAAGATAGAACCATTTCATTCTCAGG GTGAACCTGGTTGTAGAAGATGGAACCATTTCATTCTCAGG < 41bp 0.832325002865806 0.459498059604207 0.2865852 0.17901096 prediction 0.664650005731611 Functional Loss - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606500 chr11:55606501 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_4956 0 0 0 0 0 unknown 0.438698250679491 0.438718592771445 0 0 hPsi_site_10373 iPseU_CNN:0;iRNA_PseU:0 10374 chr12 69995170 69995170 1 + A G rs572546075 69995169 + 69995149 69995189 41 GTTGTGTTTGAAAGATACTCTATTAAAGAAGACTGTGGAAT GTTGTGTTTGAAAGATACTCTGTTAAAGAAGACTGTGGAAT < 41bp 0.832290419882975 0.446388959665648 0.3877255 0.27356353 prediction 0.66458083976595 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69995169 chr12:69995170 nonsynonymous SNV 0.226 0 22 hPsi_associated_SNPs_4957 0 0 1 0 1 Nucleus 0.438399015545344 0.437845779527937 0 0 hPsi_site_10374 iPseU_CNN:0;iRNA_PseU:0 10375 chr5 479949 479949 1 + A G LUAD 479948 + 479928 479968 41 GGCAGAGCAAGCGGCTCTGCTACCTCAGCCACGTAGCTGAT GGCAGAGCAAGCGGCTCTGCTGCCTCAGCCACGTAGCTGAT < 41bp 0.880548033556907 0.548264597729475 0.62038934 0.29008818 prediction 0.664566871654864 Functional Loss - SLC9A3-AS1;SLC9A3 ENSG00000225138;ENSG00000066230 ncRNA_exonic;splicing Human other chr5:479948 chr5:479949 . 0.637 0 22 hPsi_associated_SNPs_4958 0 0 1 0 0 unknown 0.438731870338501 0.438649810145086 0.24077868 0 hPsi_site_10375 iPseU_CNN:0.24077868;iRNA_PseU:0 10376 chr12 122369731 122369731 1 + A G COAD 122369730 + 122369710 122369750 41 AAAGGCAGAGAGTTCTTCTGTATGTTTGTGCTCACACTGCG AAAGGCAGAGAGTTCTTCTGTGTGTTTGTGCTCACACTGCG < 41bp 0.904643224134334 0.572369554677885 0.32381678 0.29552957 prediction 0.664547338912898 Functional Loss - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122369730 chr12:122369731 nonsynonymous SNV 0.576 4 22 hPsi_associated_SNPs_4959 0 0 1 0 2 chromatin 0.438718622981092 0.438727735726255 0 0 hPsi_site_10376 iPseU_CNN:0;iRNA_PseU:0 10377 chr17 39394620 39394620 1 + A G LUAD 39394619 + 39394599 39394639 41 TGTACTGCAGAAGAACCTGCTACCACCCCACGACTGTCTGC TGTACTGCAGAAGAACCTGCTGCCACCCCACGACTGTCTGC < 41bp 0.890011246884587 0.557750162513892 0.6776904 0.23666707 prediction 0.664522168741389 Functional Loss - KRTAP9-8 ENSG00000187272 CDS Human protein_coding chr17:39394619 chr17:39394620 nonsynonymous SNV 0.041 2 22 hPsi_associated_SNPs_4960 0 0 0 0 0 unknown 0.438717952426389 0.438483726667664 0.3553808 0 hPsi_site_10377 iPseU_CNN:0.3553808;iRNA_PseU:0 10378 chr3 97887902 97887902 1 + A G CESC 97887901 + 97887881 97887921 41 TTCTCTTGGCAACAATGGCATATGATCGCTATGTAGCCATA TTCTCTTGGCAACAATGGCATGTGATCGCTATGTAGCCATA < 41bp 0.872749203006745 0.540496253031457 0.6301953 0.43602708 prediction 0.664505899950576 Functional Loss - OR5H15 ENSG00000233412 CDS Human protein_coding chr3:97887901 chr3:97887902 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_4961 0 0 0 0 0 unknown 0.43869397974124 0.438709510502691 0.2603906 0 hPsi_site_10378 iPseU_CNN:0.2603906;iRNA_PseU:0 10379 chr1 166819057 166819057 1 + A G PAAD 166819056 + 166819036 166819076 41 ATGGGAGGAAGTTACCACCGTACATCATTTTGAGGGGAACA ATGGGAGGAAGTTACCACCGTGCATCATTTTGAGGGGAACA < 41bp 0.832232152965037 0.423014253440963 0.85788536 0.71871126 prediction 0.664464305930075 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166819056 chr1:166819057 nonsynonymous SNV 0.961 4 22 hPsi_associated_SNPs_4962 0 0 1 0 0 Nucleus 0.438718592994598 0.438718592995101 0.2783482 0 hPsi_site_10379 iPseU_CNN:0.2783482;iRNA_PseU:0 10380 chrX 79279618 79279618 1 + A G STAD 79279617 + 79279597 79279637 41 GGTTGGATCCAGGGAAGCAGTACCATGTGGCCATCGATGTG GGTTGGATCCAGGGAAGCAGTGCCATGTGGCCATCGATGTG < 41bp 0.832204964198611 0.413761740948388 0.3658942 0.29190156 prediction 0.664409928397223 Functional Loss - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79279617 chrX:79279618 nonsynonymous SNV 0.584 5 22 hPsi_associated_SNPs_4963 0 0 0 0 2 unknown 0.43871859751353 0.438718586493951 0 0 hPsi_site_10380 iPseU_CNN:0;iRNA_PseU:0 10381 chr2 47301029 47301029 1 + A G rs3739099 47301028 + 47301008 47301048 41 GCTGGAGGCCAGCAGCCCTGTACTGCCCTTCTCCATCATCC GCTGGAGGCCAGCAGCCCTGTGCTGCCCTTCTCCATCATCC < 41bp 0.832202362536733 0.430320027686669 0.9034544 0.380749 prediction 0.664404725073465 Functional Loss - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47301028 chr2:47301029 synonymous SNV . 0 22 hPsi_associated_SNPs_4964 0 0 0 0 0 Nucleus 0.438720543730505 0.438732710602213 0.8069088 0 hPsi_site_10381 iPseU_CNN:0.8069088;iRNA_PseU:0 10382 chr8 94934931 94934931 1 + A G UCEC 94934930 + 94934910 94934950 41 ACTTTAACAGCTTGAGGACTTACTGGCAAGAGCTTATAGAC ACTTTAACAGCTTGAGGACTTGCTGGCAAGAGCTTATAGAC < 41bp 0.832178429061507 0.435948790359985 0.2571007 0.16951624 prediction 0.664356858123013 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94934930 chr8:94934931 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_4965 0 0 0 0 0 Ribosome 0.438409479761595 0.438490136893639 0 0 hPsi_site_10382 iPseU_CNN:0;iRNA_PseU:0 10383 chr2 160604791 160604791 1 + A G SKCM 160604790 + 160604770 160604810 41 TTCACAGTCCCGTAGTAATGTACCATCAGCTTCTGAAGTTC TTCACAGTCCCGTAGTAATGTGCCATCAGCTTCTGAAGTTC < 41bp 0.8948304380676 0.562654689618189 0.3513869 0.24833012 prediction 0.664351496898822 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604790 chr2:160604791 synonymous SNV . 0 22 hPsi_associated_SNPs_4966 0 0 1 0 0 Cytosol 0.438731987735876 0.438917420835777 0 0 hPsi_site_10383 iPseU_CNN:0;iRNA_PseU:0 10384 chr17 34893785 34893785 1 + A G STAD 34893784 + 34893764 34893804 41 TACCAGCTAGCCCTTGACTTTACCTCACTGAAGAGGTTAAT TACCAGCTAGCCCTTGACTTTGCCTCACTGAAGAGGTTAAT < 41bp 0.893914422143013 0.561739078430563 0.30514485 0.17932922 prediction 0.664350687424899 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893784 chr17:34893785 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_4967 0 0 1 0 0 Ribosome 0.438718592952201 0.438720796225761 0 0 hPsi_site_10384 iPseU_CNN:0;iRNA_PseU:0 10385 chrX 153416315 153416315 1 + A G rs1065420 153416314 + 153416294 153416334 41 GAACCTGGCGGTCGCTGACCTAGCAGAGACCGTCATCGCCA GAACCTGGCGGTCGCTGACCTGGCAGAGACCGTCATCGCCA < 41bp 0.832151351403888 0.414408276531329 0.22642255 0.14387012 prediction 0.664302702807777 Functional Loss - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153416314 chrX:153416315 synonymous SNV . 0 22 hPsi_associated_SNPs_4968 0 0 0 0 0 unknown 0.438410172216546 0.438710081683946 0 0 hPsi_site_10385 iPseU_CNN:0;iRNA_PseU:0 Multiple continuous traits in DGI samples 10386 chr15 102358824 102358824 1 + A C rs143173308 102358823 + 102358803 102358843 41 AAGAATGTGTCTATACTTTTTAGCCACTTCCTCTATCATTG AAGAATGTGTCTATACTTTTTCGCCACTTCCTCTATCATTG < 41bp 0.832132374492068 0.499344155690791 0.39882413 0.27232736 prediction 0.664264748984136 Functional Loss - OR4F15 ENSG00000182854 CDS Human protein_coding chr15:102358823 chr15:102358824 nonsynonymous SNV 0.082 1 22 hPsi_associated_SNPs_4969 0 0 0 0 0 unknown 0.438719189956457 0.438728438069129 0 0 hPsi_site_10386 iPseU_CNN:0;iRNA_PseU:0 10387 chr5 137372884 137372884 1 + A G rs146469735 137372883 + 137372863 137372903 41 CCAGGATGAGAAGTGACTGGTATAGACCAATCCTTTGTGTT CCAGGATGAGAAGTGACTGGTGTAGACCAATCCTTTGTGTT < 41bp 0.851680629855104 0.51955288026719 0.9381629 0.7264034 prediction 0.664255499175826 Functional Loss - LOC100130172 ENSG00000246323 ncRNA_exonic Human antisense chr5:137372883 chr5:137372884 . . 0 22 hPsi_associated_SNPs_4970 0 0 0 0 0 unknown 0.438600767398087 0.438714450773951 0.423519 0 hPsi_site_10387 iPseU_CNN:0.423519;iRNA_PseU:0 10388 chr19 7705879 7705879 1 + A G GBM 7705878 + 7705858 7705898 41 TTCACCTTGCCTTCCTCCCCTACGAGGCCCAGGTACGGCCC TTCACCTTGCCTTCCTCCCCTGCGAGGCCCAGGTACGGCCC < 41bp 0.887591299934568 0.555468517022831 0.32959563 0.2853619 prediction 0.664245565823474 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7705878 chr19:7705879 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_4971 0 0 1 0 2 chromatin 0.438718592994963 0.438718592995102 0 0 hPsi_site_10388 iPseU_CNN:0;iRNA_PseU:0 10389 chr12 54396971 54396971 1 + A G rs1867297 54396970 + 54396950 54396990 41 CTGGGGACCATGCCGCGGGCTAGGTCGGGCCCGTGCAGGCC CTGGGGACCATGCCGCGGGCTGGGTCGGGCCCGTGCAGGCC < 41bp 0.848409507843777 0.516317770549753 0.30468315 0.15540344 prediction 0.664183474588047 Functional Loss - HOXC9 ENSG00000180806 UTR3 Human protein_coding chr12:54396970 chr12:54396971 . . 0 22 hPsi_associated_SNPs_4972 0 0 1 0 0 chromatin 0.438718646869918 0.438718646445054 0 0 hPsi_site_10389 iPseU_CNN:0;iRNA_PseU:0 10390 chr1 20474797 20474797 1 + A G LIHC 20474796 + 20474776 20474816 41 ACCGTGGCTTCCTCAATGTCTACTGCCAGGGCCCCACGCCC ACCGTGGCTTCCTCAATGTCTGCTGCCAGGGCCCCACGCCC < 41bp 0.832048444903312 0.436452071839173 0.4069111 0.27015328 prediction 0.664096889806624 Functional Loss - PLA2G2F ENSG00000158786 CDS Human protein_coding chr1:20474796 chr1:20474797 nonsynonymous SNV 0.848 3 22 hPsi_associated_SNPs_4973 0 0 0 0 0 unknown 0.438753595658657 0.438751360120894 0 0 hPsi_site_10390 iPseU_CNN:0;iRNA_PseU:0 Multiple complex diseases 10391 chr2 113676303 113676303 1 + A C COAD 113676302 + 113676282 113676322 41 GAGCCTGTTGGGGTGACAGATAAATTTGAGAACAGGAAACA GAGCCTGTTGGGGTGACAGATCAATTTGAGAACAGGAAACA < 41bp 0.836839468632413 0.504831347050491 0.30870295 0.23217818 prediction 0.664016243163843 Functional Loss - IL37 ENSG00000125571 CDS Human protein_coding chr2:113676302 chr2:113676303 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4974 0 0 0 0 0 exosome 0.43869622171 0.438785680139135 0 0 hPsi_site_10391 iPseU_CNN:0;iRNA_PseU:0 10392 chr7 5965384 5965384 1 + A G rs548049907 5965383 + 5965363 5965403 41 ACATTTGGTCACATGCAAGTTAGTGGTCATATGACGGACTG ACATTTGGTCACATGCAAGTTGGTGGTCATATGACGGACTG < 41bp 0.877890283179876 0.545884049599274 0.48901212 0.18645191 prediction 0.664012467161204 Functional Loss - CCZ1 ENSG00000122674;ENSG00000155026 UTR3 Human other chr7:5965383 chr7:5965384 . . 0 22 hPsi_associated_SNPs_4975 0 0 0 0 0 Ribosome 0.439017601765289 0.438865546940909 0 0 hPsi_site_10392 iPseU_CNN:0;iRNA_PseU:0 10393 chr3 127381120 127381120 1 + A G LUAD 127381119 + 127381099 127381139 41 GCAATCTGGCTGGGAAAAACTACATCATTCTGAACATGACA GCAATCTGGCTGGGAAAAACTGCATCATTCTGAACATGACA < 41bp 0.831995773142811 0.440379617275135 0.20763615 0.16466025 prediction 0.663991546285622 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127381119 chr3:127381120 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_4976 0 0 1 0 2 chromatin 0.438653765677214 0.438413707037596 0 0 hPsi_site_10393 iPseU_CNN:0;iRNA_PseU:0 10394 chr16 68842633 68842633 1 + A G STAD 68842632 + 68842612 68842652 41 ACAAAGAAGGCAAGGTTTTCTACAGCATCACTGGCCAAGGA ACAAAGAAGGCAAGGTTTTCTGCAGCATCACTGGCCAAGGA < 41bp 0.831993130055469 0.415359672444766 0.37842163 0.3152777 prediction 0.663986260110939 Functional Loss - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68842632 chr16:68842633 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_4977 0 0 0 0 1 Nucleus 0.439856523464138 0.438760057980127 0 0 hPsi_site_10394 iPseU_CNN:0;iRNA_PseU:0 10395 chr7 73245549 73245549 1 + A G UCEC 73245548 + 73245528 73245568 41 AACAATGGCCTCCATGGGGCTACAGGTAATGGGCATCGCGC AACAATGGCCTCCATGGGGCTGCAGGTAATGGGCATCGCGC < 41bp 0.831991593340513 0.444299900474553 0.3291915 0.1921112 prediction 0.663983186681026 Functional Loss - CLDN4 ENSG00000189143 CDS Human protein_coding chr7:73245548 chr7:73245549 synonymous SNV . 0 22 hPsi_associated_SNPs_4978 0 0 1 0 0 Ribosome 0.43870479822083 0.438718959711793 0 0 hPsi_site_10395 iPseU_CNN:0;iRNA_PseU:0 10396 chr14 74424938 74424938 1 + T C rs3180946 74424939 - 74424919 74424959 41 GCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGT GCTGCCATCACCTAGGGTAATGTGAACCCAAGGGCTGGAGT < 41bp 0.851921453995217 0.519936359295938 0.54937416 0.3113168 prediction 0.663970189398559 Functional Loss - COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424939 chr14:74424938 synonymous SNV . 0 22 hPsi_associated_SNPs_4979 1 0 0 2 0 Ribosome 0.438718592995021 0.438718592994763 0.0987483199999999 0 hPsi_site_10396 iPseU_CNN:0.0987483199999999;iRNA_PseU:0 10397 chrX 78426638 78426638 1 + A C LUSC 78426637 + 78426617 78426657 41 TATTAGCCCTGTGGGTATTCTATGGTTATATGAAAGAAACA TATTAGCCCTGTGGGTATTCTCTGGTTATATGAAAGAAACA < 41bp 0.831983785167459 0.498878900853594 0.34899837 0.26507697 prediction 0.663967570334919 Functional Loss - GPR174 ENSG00000147138 CDS Human protein_coding chrX:78426637 chrX:78426638 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_4980 0 0 0 0 0 exosome 0.438708658640664 0.438718629349926 0 0 hPsi_site_10397 iPseU_CNN:0;iRNA_PseU:0 10398 chr20 42331157 42331157 1 + A G UCEC 42331156 + 42331136 42331176 41 GATGCTTGGTGTGACCTGAGTAAATTTGACCTCCCTGAGGA GATGCTTGGTGTGACCTGAGTGAATTTGACCTCCCTGAGGA < 41bp 0.831981965226861 0.42656466619137 0.684392 0.4550647 prediction 0.663963930453722 Functional Loss - MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42331156 chr20:42331157 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4981 0 0 1 0 1 Cytosol 0.438718363194935 0.438506674907374 0.368784 0 hPsi_site_10398 iPseU_CNN:0.368784;iRNA_PseU:0 10399 chr7 148951926 148951926 1 + A G rs114314835 148951925 + 148951905 148951945 41 CCCTCCATTTTTTCTTGTTTTATAATCTCTTTGTTTAATAA CCCTCCATTTTTTCTTGTTTTGTAATCTCTTTGTTTAATAA < 41bp 0.831977800923264 0.479460540722659 0.27085763 0.27642953 prediction 0.663955601846528 Functional Loss - ZNF212 ENSG00000170260 UTR3 Human protein_coding chr7:148951925 chr7:148951926 . . 0 22 hPsi_associated_SNPs_4982 0 0 1 1 0 Cytosol 0.43871859557699 0.438721410291162 0 0 hPsi_site_10399 iPseU_CNN:0;iRNA_PseU:0 10400 chr22 32506041 32506041 1 + A G rs17683704 32506040 + 32506020 32506060 41 CTATGACCTATTTTGTGGGCTAGAGCAGCACGGTGCACCCA CTATGACCTATTTTGTGGGCTGGAGCAGCACGGTGCACCCA < 41bp 0.831968668873987 0.433955347072689 0.3114395 0.2805738 prediction 0.663937337747973 Functional Loss - SLC5A1 ENSG00000100170 CDS Human protein_coding chr22:32506040 chr22:32506041 synonymous SNV . 0 22 hPsi_associated_SNPs_4983 2 0 0 0 1 Nucleus 0.438719766423115 0.43871859319216 0 0 hPsi_site_10400 iPseU_CNN:0;iRNA_PseU:0 10401 chr9 127115819 127115819 1 + A C rs556621249 127115818 + 127115798 127115838 41 CACTAGCCACATGAGTGTCTTACTGGGCCTCAATGCTCACC CACTAGCCACATGAGTGTCTTCCTGGGCCTCAATGCTCACC < 41bp 0.831955190739805 0.497502063009067 0.33071274 0.20279735 prediction 0.66391038147961 Functional Loss - LOC100129034 ENSG00000136930 UTR3 Human protein_coding chr9:127115818 chr9:127115819 . . 0 22 hPsi_associated_SNPs_4984 0 0 0 0 0 unknown 0.438718596222246 0.438718718171637 0 0 hPsi_site_10401 iPseU_CNN:0;iRNA_PseU:0 10402 chr20 398500 398500 1 + A G COAD 398499 + 398479 398519 41 ATGGGGACAGTGCCTACCTCTATCTGCTGTCAGCCCGCAAC ATGGGGACAGTGCCTACCTCTGTCTGCTGTCAGCCCGCAAC < 41bp 0.903472165665924 0.571528386322291 0.6448357 0.46184444 prediction 0.663887558687265 Functional Loss - RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398499 chr20:398500 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_4985 0 0 1 0 1 Ribosome 0.438718589303155 0.438718587517665 0.2896714 0 hPsi_site_10402 iPseU_CNN:0.2896714;iRNA_PseU:0 10403 chr3 113327305 113327305 1 + A G UCEC 113327304 + 113327284 113327324 41 CACTTTGGTCTCTTCTACGCTATGGGCATTGCATTGATGAT CACTTTGGTCTCTTCTACGCTGTGGGCATTGCATTGATGAT < 41bp 0.831939864884838 0.410455889959536 0.33746433 0.28488487 prediction 0.663879729769675 Functional Loss - SIDT1 ENSG00000072858 CDS Human protein_coding chr3:113327304 chr3:113327305 nonsynonymous SNV 0.943 2 22 hPsi_associated_SNPs_4986 0 0 0 1 2 exosome 0.438715543706733 0.438705493783366 0 0 hPsi_site_10403 iPseU_CNN:0;iRNA_PseU:0 10404 chr7 44150728 44150728 1 + A G UCEC 44150727 + 44150707 44150747 41 TGGGCCAGCCGGCACCCAGCTAAAGACAACCCCGCCTCCCT TGGGCCAGCCGGCACCCAGCTGAAGACAACCCCGCCTCCCT < 41bp 0.831914931472585 0.42572093261613 0.6714138 0.34144434 prediction 0.66382986294517 Functional Loss - AEBP1 ENSG00000106624 CDS Human protein_coding chr7:44150727 chr7:44150728 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_4987 0 0 0 0 0 Endoplasmic reticulum 0.438718592942333 0.438718905302385 0.3428276 0 hPsi_site_10404 iPseU_CNN:0.3428276;iRNA_PseU:0 10405 chr2 132277731 132277731 1 + A G LUSC 132277730 + 132277710 132277750 41 TCCTCGGCAGCTTCTGTCGCTACCACCTCACAGAACCTGGG TCCTCGGCAGCTTCTGTCGCTGCCACCTCACAGAACCTGGG < 41bp 0.869511271157795 0.537602274995845 0.4015702 0.18057704 prediction 0.6638179923239 Functional Loss - LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132277730 chr2:132277731 . . 0 22 hPsi_associated_SNPs_4988 0 0 0 0 1 unknown 0.438736118426352 0.43871845522418 0 0 hPsi_site_10405 iPseU_CNN:0;iRNA_PseU:0 10406 chr11 55798042 55798042 1 + A G ESCA 55798041 + 55798021 55798061 41 ATACTCTTAATAATTCTAGTTAATATTAATTCAAGCCTTCA ATACTCTTAATAATTCTAGTTGATATTAATTCAAGCCTTCA < 41bp 0.8318997979687 0.484952656064669 0.19783518 0.12992686 prediction 0.663799595937401 Functional Loss - OR5AS1 ENSG00000181785 CDS Human protein_coding chr11:55798041 chr11:55798042 nonsynonymous SNV 0.100 0 22 hPsi_associated_SNPs_4989 0 0 0 0 0 unknown 0.438111488574317 0.438718255743699 0 0 hPsi_site_10406 iPseU_CNN:0;iRNA_PseU:0 10407 chr15 102358817 102358817 1 + A G ACC 102358816 + 102358796 102358836 41 TGAGCCCAAGAATGTGTCTATACTTTTTAGCCACTTCCTCT TGAGCCCAAGAATGTGTCTATGCTTTTTAGCCACTTCCTCT < 41bp 0.831892188776813 0.448130670610946 0.6205419 0.23281798 prediction 0.663784377553626 Functional Loss - OR4F15 ENSG00000182854 CDS Human protein_coding chr15:102358816 chr15:102358817 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_4990 0 0 0 0 0 unknown 0.438713943728339 0.438716980980965 0.2410838 0 hPsi_site_10407 iPseU_CNN:0.2410838;iRNA_PseU:0 10408 chr2 79253917 79253917 1 + A G LGG 79253916 + 79253896 79253936 41 AGGCCTATGGCTCCCCCTGCTATGCCTTGTTTTTGTCACCA AGGCCTATGGCTCCCCCTGCTGTGCCTTGTTTTTGTCACCA < 41bp 0.831844641625602 0.420314629188402 0.40785018 0.39120182 prediction 0.663689283251205 Functional Loss - REG3G ENSG00000143954 CDS Human protein_coding chr2:79253916 chr2:79253917 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_4991 0 0 0 0 2 unknown 0.438709414429497 0.438717834642348 0 0 hPsi_site_10408 iPseU_CNN:0;iRNA_PseU:0 10409 chr1 150923371 150923371 1 + A G BLCA 150923370 + 150923350 150923390 41 TGGACCGAAAGTTTCAGCCCTATAAGCCTTTTTACTATATT TGGACCGAAAGTTTCAGCCCTGTAAGCCTTTTTACTATATT < 41bp 0.89243809275183 0.560596893170909 0.5599952 0.31568053 prediction 0.66368239916184 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923370 chr1:150923371 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4992 0 0 1 0 0 Nucleus 0.43871737840093 0.43871815746896 0.1199904 0 hPsi_site_10409 iPseU_CNN:0.1199904;iRNA_PseU:0 10410 chr22 36122332 36122332 1 + A G COAD 36122331 + 36122311 36122351 41 GTCCACAGTGATGAGGCTGGTATGCTGTCCTACTTTCTGTT GTCCACAGTGATGAGGCTGGTGTGCTGTCCTACTTTCTGTT < 41bp 0.831823808183547 0.43239033421205 0.54120547 0.27458102 prediction 0.663647616367094 Functional Loss - APOL5 ENSG00000128313 CDS Human protein_coding chr22:36122331 chr22:36122332 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_4993 0 0 0 0 1 unknown 0.43871859359651 0.438718366881191 0.0824109399999999 0 hPsi_site_10410 iPseU_CNN:0.0824109399999999;iRNA_PseU:0 10411 chr9 125437916 125437916 1 + A G STAD 125437915 + 125437895 125437935 41 GTGAATCGGCTCACCTTTTGTACATCAAATGTTATCCATCA GTGAATCGGCTCACCTTTTGTGCATCAAATGTTATCCATCA < 41bp 0.831820896422807 0.444546111984198 0.6490238 0.328384 prediction 0.663641792845614 Functional Loss - OR1L3 ENSG00000171481 CDS Human protein_coding chr9:125437915 chr9:125437916 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_4994 0 0 0 0 0 unknown 0.438422512410206 0.438426321130972 0.2980476 0 hPsi_site_10411 iPseU_CNN:0.2980476;iRNA_PseU:0 10412 chr16 31141880 31141880 1 + A G rs1549294 31141879 + 31141859 31141899 41 CTACTGGTCCTGGGTGCTGCTAGAGATCCTGCGGGACTTCC CTACTGGTCCTGGGTGCTGCTGGAGATCCTGCGGGACTTCC < 41bp 0.831795262597228 0.411605745114529 0.36783218 0.2788387 prediction 0.663590525194456 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141879 chr16:31141880 synonymous SNV . 0 22 hPsi_associated_SNPs_4995 0 0 1 6 1 Ribosome 0.438719431967019 0.438718592995568 0 0 hPsi_site_10412 iPseU_CNN:0;iRNA_PseU:0 10413 chr8 104447984 104447984 1 + A G LUSC 104447983 + 104447963 104448003 41 TCTGCTAGTTTCGATAAATCTATTCGAATCTTTCCTGTAGA TCTGCTAGTTTCGATAAATCTGTTCGAATCTTTCCTGTAGA < 41bp 0.831791048203893 0.432253627671287 0.47786677 0.3749535 prediction 0.663582096407786 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104447983 chr8:104447984 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_4996 0 0 1 0 1 Nucleus 0.438902815912827 0.438959359975808 0 0 hPsi_site_10413 iPseU_CNN:0;iRNA_PseU:0 10414 chr6 31807337 31807337 1 + A G rs200881992 31807336 + 31807316 31807356 41 TCAGGAATTTGCTGACACAATATCTTCCGCCTGGTGCTGGG TCAGGAATTTGCTGACACAATGTCTTCCGCCTGGTGCTGGG < 41bp 0.860105749478448 0.528328868526998 0.3232093 0.25288263 prediction 0.663553761902901 Functional Loss - C6orf48 ENSG00000204387 CDS Human protein_coding chr6:31807336 chr6:31807337 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_4997 0 0 1 0 1 Ribosome 0.439134387164044 0.441508547703915 0 0 hPsi_site_10414 iPseU_CNN:0;iRNA_PseU:0 10415 chr11 134632074 134632074 1 + A G rs7939769 134632073 + 134632053 134632093 41 GGAGCCCGCAGGAGCCCCGGTACTCGGGAGGAGCCGGACGC GGAGCCCGCAGGAGCCCCGGTGCTCGGGAGGAGCCGGACGC < 41bp 0.831759835903471 0.473378658035456 0.9337592 0.4294379 prediction 0.663519671806943 Functional Loss - LOC283177;LOC100507548 ENSG00000251226 ncRNA_exonic Human lincRNA chr11:134632073 chr11:134632074 . . 0 22 hPsi_associated_SNPs_4998 0 0 0 0 0 unknown 0.438718139566746 0.438718589704923 0.8675184 0 hPsi_site_10415 iPseU_CNN:0.8675184;iRNA_PseU:0 10416 chr8 41469463 41469463 1 + A G STAD 41469462 + 41469442 41469482 41 AACATGTTCACTTAATGTGTTACCGGATCTGCGTGCGAGCG AACATGTTCACTTAATGTGTTGCCGGATCTGCGTGCGAGCG < 41bp 0.90185570483085 0.570097056857804 0.63546026 0.2640373 prediction 0.663517295946091 Functional Loss - GPAT4 ENSG00000158669 CDS Human protein_coding chr8:41469462 chr8:41469463 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_4999 0 0 1 0 2 Ribosome 0.438789703239261 0.438722196378204 0.27092052 0 hPsi_site_10416 iPseU_CNN:0.27092052;iRNA_PseU:0 10417 chrX 1534308 1534308 1 + A G rs6655376 1534307 + 1534287 1534327 41 TCGGCTACTTGCACTGATGATAACTTCACACAGTCGTCCAC TCGGCTACTTGCACTGATGATGACTTCACACAGTCGTCCAC < 41bp 0.831749716793281 0.454949074894333 0.28688693 0.21451744 prediction 0.663499433586562 Functional Loss - ASMTL-AS1 ENSG00000169093 intronic Human protein_coding chrX:1534307 chrX:1534308 . . 0 22 hPsi_associated_SNPs_5000 0 0 0 0 0 unknown 0.438416855454796 0.436567818817628 0 0 hPsi_site_10417 iPseU_CNN:0;iRNA_PseU:0 10418 chr16 29810809 29810809 1 + A G COAD 29810808 + 29810788 29810828 41 GGACAGCAAGCTCACTCGCCTATTGCAGGTCAGGCCCACCT GGACAGCAAGCTCACTCGCCTGTTGCAGGTCAGGCCCACCT < 41bp 0.831745072193463 0.420220584110828 0.42714494 0.45988894 prediction 0.663490144386926 Functional Loss - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29810808 chr16:29810809 synonymous SNV . 0 22 hPsi_associated_SNPs_5001 0 0 1 0 1 Cytosol 0.438727479827222 0.439315957427261 0 0 hPsi_site_10418 iPseU_CNN:0;iRNA_PseU:0 10419 chr1 151630757 151630757 1 + A G UCEC 151630756 + 151630736 151630776 41 GGCAGCTGTGTTCTAAGCGGTACCGGGAGTTTGCTATCCTA GGCAGCTGTGTTCTAAGCGGTGCCGGGAGTTTGCTATCCTA < 41bp 0.83172320899312 0.420192166936431 0.729675 0.20774865 prediction 0.66344641798624 Functional Loss - SNX27 ENSG00000143376 CDS Human protein_coding chr1:151630756 chr1:151630757 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5002 0 0 1 0 1 Ribosome 0.438718592899239 0.438718592995075 0.45935 0 hPsi_site_10419 iPseU_CNN:0.45935;iRNA_PseU:0 10420 chr3 136664512 136664512 1 + A G CESC 136664511 + 136664491 136664531 41 TTGACCCAGGGGAACGTCTCTATGACCTCAACATGCCCGCT TTGACCCAGGGGAACGTCTCTGTGACCTCAACATGCCCGCT < 41bp 0.831680176673521 0.4400407566685 0.42954493 0.26056665 prediction 0.663360353347042 Functional Loss - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664511 chr3:136664512 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_5003 0 0 1 0 1 Ribosome 0.438719164012429 0.438725265681895 0 0 hPsi_site_10420 iPseU_CNN:0;iRNA_PseU:0 10421 chr14 20692677 20692677 1 + A G rs150686413 20692676 + 20692656 20692696 41 TAATGGTGGTGTCTCTATTCTATGGAACCCTTATGGTGATG TAATGGTGGTGTCTCTATTCTGTGGAACCCTTATGGTGATG < 41bp 0.883276206216028 0.551609205327351 0.3574757 0.3332669 prediction 0.663334001777354 Functional Loss - OR11H6 ENSG00000176219 CDS Human protein_coding chr14:20692676 chr14:20692677 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5004 0 0 0 0 0 unknown 0.438717630149172 0.438717182381371 0 0 hPsi_site_10421 iPseU_CNN:0;iRNA_PseU:0 10422 chr3 179096536 179096536 1 + A G LUSC 179096535 + 179096515 179096555 41 CCTGGGCTGGTCTTCCCTTGTACATCGATTTTTGGGCCCTA CCTGGGCTGGTCTTCCCTTGTGCATCGATTTTTGGGCCCTA < 41bp 0.831655921937344 0.434745379659765 0.5814083 0.3345474 prediction 0.663311843874687 Functional Loss - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179096535 chr3:179096536 synonymous SNV . 0 22 hPsi_associated_SNPs_5005 0 0 1 0 1 Ribosome 0.438718592995049 0.438718592994205 0.1628166 0 hPsi_site_10422 iPseU_CNN:0.1628166;iRNA_PseU:0 10423 chr5 43175157 43175157 1 + A C BLCA 43175156 + 43175136 43175176 41 TCACGAAGATGCTGAGGATTTAGAGACCAAGCCAACAGTGG TCACGAAGATGCTGAGGATTTCGAGACCAAGCCAACAGTGG < 41bp 0.85140536820814 0.519752779050014 0.39824015 0.38084126 prediction 0.663305178316251 Functional Loss - ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43175156 chr5:43175157 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5006 0 0 1 0 0 Cytosol 0.43871817151491 0.438718659823089 0 0 hPsi_site_10423 iPseU_CNN:0;iRNA_PseU:0 10424 chr12 55794973 55794973 1 + A G BLCA 55794972 + 55794952 55794992 41 CTCTCCTACACACTCATCCTTAAAACAATTCTGAAGATTCC CTCTCCTACACACTCATCCTTGAAACAATTCTGAAGATTCC < 41bp 0.831638183489575 0.457610165902305 0.6127746 0.31978583 prediction 0.663276366979151 Functional Loss - OR6C65 ENSG00000205328 CDS Human protein_coding chr12:55794972 chr12:55794973 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_5007 0 0 0 0 0 unknown 0.438718596161337 0.438719203049137 0.2255492 0 hPsi_site_10424 iPseU_CNN:0.2255492;iRNA_PseU:0 10425 chr5 147820719 147820719 1 + T G LUSC 147820718 + 147820698 147820738 41 GGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAG GGAGCTCCATATTCCATGATTGCTGACTTCCCTTGGCTGAG < 41bp 0.836480115625218 0.504849167625328 0.42345345 0.25170702 prediction 0.66326189599978 Functional Loss - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820718 chr5:147820719 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5008 0 0 1 0 2 Ribosome 0.438699321692835 0.438715386299337 0 0 hPsi_site_10425 iPseU_CNN:0;iRNA_PseU:0 10426 chr20 34130126 34130126 1 + A G LUAD 34130125 + 34130105 34130145 41 TGTTCCTGTCCGAGCTGCAGTATTACCTCACCACGGAGGTA TGTTCCTGTCCGAGCTGCAGTGTTACCTCACCACGGAGGTA < 41bp 0.903410524034132 0.571814420075262 0.2877123 0.22906417 prediction 0.66319220791774 Functional Loss - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34130125 chr20:34130126 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5009 0 0 1 0 2 Ribosome 0.438718588328674 0.438713842957582 0 0 hPsi_site_10426 iPseU_CNN:0;iRNA_PseU:0 10427 chr6 132892362 132892362 1 + A G SKCM 132892361 + 132892341 132892381 41 AGATTTGCTGTTGGTGTGCTTATTATAACTCAGCCATGAAT AGATTTGCTGTTGGTGTGCTTGTTATAACTCAGCCATGAAT < 41bp 0.83157718372352 0.465139779835095 0.20331821 0.17361152 prediction 0.663154367447039 Functional Loss - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132892361 chr6:132892362 nonsynonymous SNV 0.952 4 22 hPsi_associated_SNPs_5010 0 0 0 0 0 unknown 0.43871640667198 0.438704798421197 0 0 hPsi_site_10427 iPseU_CNN:0;iRNA_PseU:0 10428 chr6 161173982 161173982 1 + A C STAD 161173981 + 161173961 161174001 41 CGAGAAGGACAAATACATTTTACAAGGAGTCACTTCTTGGG CGAGAAGGACAAATACATTTTCCAAGGAGTCACTTCTTGGG < 41bp 0.854568087063077 0.523016796671289 0.5418059 0.35351127 prediction 0.663102580783577 Functional Loss - PLG ENSG00000122194 CDS Human protein_coding chr6:161173981 chr6:161173982 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5011 0 0 0 0 0 exosome 0.438718637430345 0.438718593628999 0.0836117999999999 0 hPsi_site_10428 iPseU_CNN:0.0836117999999999;iRNA_PseU:0 10429 chr14 75472590 75472590 1 + T G UCEC 75472589 + 75472569 75472609 41 GGTCATGAAATGGCTGTGAATTTGTCCAAAGCAGGTATTGA GGTCATGAAATGGCTGTGAATGTGTCCAAAGCAGGTATTGA < 41bp 0.831480131433843 0.496098801069781 0.30914277 0.254903 prediction 0.662960262867686 Functional Loss - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75472589 chr14:75472590 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5012 0 0 1 0 1 Ribosome 0.438772432174805 0.438715527846763 0 0 hPsi_site_10429 iPseU_CNN:0;iRNA_PseU:0 10430 chr3 178927410 178927410 1 + A G rs2230461 178927409 + 178927389 178927429 41 TGAATGGCTGAATTATGATATATACATTCCTGATCTTCCTC TGAATGGCTGAATTATGATATGTACATTCCTGATCTTCCTC < 41bp 0.831477362917452 0.433544770825979 0.63994175 0.58908606 prediction 0.662954725834904 Functional Loss - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178927409 chr3:178927410 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_5013 1 0 1 0 2 Ribosome 0.438718615382494 0.438718611554084 0.10171138 0 hPsi_site_10430 iPseU_CNN:0.10171138;iRNA_PseU:0 10431 chr12 100603900 100603900 1 + A C SKCM 100603899 + 100603879 100603919 41 CCGAGATAATCCTTCCGAATTATGCTGTATCATTGTTGATA CCGAGATAATCCTTCCGAATTCTGCTGTATCATTGTTGATA < 41bp 0.834027775572311 0.502550655078841 0.35931927 0.2959246 prediction 0.66295424098694 Functional Loss - ACTR6 ENSG00000075089 CDS Human protein_coding chr12:100603899 chr12:100603900 nonsynonymous SNV 0.676 2 22 hPsi_associated_SNPs_5014 0 0 1 0 2 Ribosome 0.438883767256073 0.438718493610074 0 0 hPsi_site_10431 iPseU_CNN:0;iRNA_PseU:0 Heel bone mineral density 10432 chr14 23236598 23236598 1 + A C rs115891437 23236597 + 23236577 23236617 41 CGCAGCCTCAGTACCTCTGCTATCTCTTTTGCAGAAGTCCA CGCAGCCTCAGTACCTCTGCTCTCTCTTTTGCAGAAGTCCA < 41bp 0.831475720532372 0.473456416967596 0.6389248 0.32159942 prediction 0.662951441064744 Functional Loss - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23236597 chr14:23236598 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_5015 0 0 1 1 1 Cytosol 0.437716891357354 0.442402196716392 0.2778496 0 hPsi_site_10432 iPseU_CNN:0.2778496;iRNA_PseU:0 10433 chr17 27183317 27183317 1 + A G COAD 27183316 + 27183296 27183336 41 CTCTTGGTCCATCACCCTGATATGCCTGAGAATTCCCGGGT CTCTTGGTCCATCACCCTGATGTGCCTGAGAATTCCCGGGT < 41bp 0.831474248320552 0.40586173912785 0.7684045 0.48303357 prediction 0.662948496641104 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27183316 chr17:27183317 nonsynonymous SNV 0.962 1 22 hPsi_associated_SNPs_5016 0 0 1 0 2 Ribosome 0.433684204984087 0.437048679269942 0.536809 0 hPsi_site_10433 iPseU_CNN:0.536809;iRNA_PseU:0 10434 chr1 224377897 224377897 1 + A G UCEC 224377896 + 224377876 224377916 41 GACATTTTATAGCTGAGCATTACATGTTCTTAAAGGGTCAT GACATTTTATAGCTGAGCATTGCATGTTCTTAAAGGGTCAT < 41bp 0.831468113247133 0.444304230704413 0.48837045 0.19738731 prediction 0.662936226494266 Functional Loss - DEGS1 ENSG00000143753 CDS Human protein_coding chr1:224377896 chr1:224377897 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5017 0 0 1 0 0 Ribosome 0.444469396177066 0.439350687038308 0 0 hPsi_site_10434 iPseU_CNN:0;iRNA_PseU:0 10435 chrX 70356853 70356853 1 + A G UCEC 70356852 + 70356832 70356872 41 GGCAAGGCTCCATAGGCCTGTACACCCAGAACCAGCCACTA GGCAAGGCTCCATAGGCCTGTGCACCCAGAACCAGCCACTA < 41bp 0.831458461672734 0.423710744568343 0.56940395 0.17941049 prediction 0.662916923345468 Functional Loss - MED12 ENSG00000184634 CDS Human protein_coding chrX:70356852 chrX:70356853 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5018 0 0 1 0 1 Cytosol 0.438718592995057 0.438718592995102 0.1388079 0 hPsi_site_10435 iPseU_CNN:0.1388079;iRNA_PseU:0 10436 chr2 201464453 201464453 1 + A C LUSC 201464452 + 201464432 201464472 41 AGAGCCCACTCTGGATCAGTTAACTGATGCCCTTGGTGGTA AGAGCCCACTCTGGATCAGTTCACTGATGCCCTTGGTGGTA < 41bp 0.855996879806344 0.524601897930324 0.7160187 0.34196 prediction 0.662789963752039 Functional Loss - AOX1 ENSG00000138356 CDS Human protein_coding chr2:201464452 chr2:201464453 nonsynonymous SNV 0.842 1 22 hPsi_associated_SNPs_5019 0 0 0 0 1 Endoplasmic reticulum 0.438708482707907 0.438718625194614 0.4320374 0 hPsi_site_10436 iPseU_CNN:0.4320374;iRNA_PseU:0 10437 chr17 2227556 2227556 1 + T C UCEC 2227557 - 2227537 2227577 41 ATGGACTTATGATCCATATGTACCAGAACCAGTACCCTGGC ATGGACTTATGATCCATATGTGCCAGAACCAGTACCCTGGC < 41bp 0.890145345329313 0.55875452660809 0.7558391 0.25573152 prediction 0.662781637442446 Functional Loss - TSR1 ENSG00000167721 CDS Human protein_coding chr17:2227557 chr17:2227556 synonymous SNV . 0 22 hPsi_associated_SNPs_5020 0 0 1 0 0 Ribosome 0.438062053551332 0.438698142834744 0.5116782 0 hPsi_site_10437 iPseU_CNN:0.5116782;iRNA_PseU:0 10438 chr19 44537128 44537128 1 + A G LUSC 44537127 + 44537107 44537147 41 GTGAGGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTG GTGAGGACTGTGGGAAGCGCTGCAAGAGGCGCTTGAATCTG < 41bp 0.831386943186861 0.453848496745777 0.70271105 0.4144937 prediction 0.662773886373722 Functional Loss - ZNF222 ENSG00000159885 CDS Human protein_coding chr19:44537127 chr19:44537128 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_5021 0 0 0 0 0 exosome 0.438718654934058 0.438711150923001 0.4054221 0 hPsi_site_10438 iPseU_CNN:0.4054221;iRNA_PseU:0 10439 chr6 54254654 54254654 1 + A G HNSC 54254653 + 54254633 54254673 41 TTTCAGGATTCTTCGAGGAGTAAATGAGTCCGACATTGAAA TTTCAGGATTCTTCGAGGAGTGAATGAGTCCGACATTGAAA < 41bp 0.872916188252216 0.541531431049852 0.27496934 0.24363822 prediction 0.662769514404726 Functional Loss - TINAG ENSG00000137251 CDS Human protein_coding chr6:54254653 chr6:54254654 synonymous SNV . 0 22 hPsi_associated_SNPs_5022 0 0 0 0 1 exosome 0.438723217671033 0.438720451372309 0 0 hPsi_site_10439 iPseU_CNN:0;iRNA_PseU:0 10440 chrX 100087867 100087867 1 + A G UCEC 100087866 + 100087846 100087886 41 AGAACCAAGAGGACCCATGCTAGATCAGAGGGGTCCACCCT AGAACCAAGAGGACCCATGCTGGATCAGAGGGGTCCACCCT < 41bp 0.831383103504896 0.4148697503299 0.7157154 0.2983734 prediction 0.662766207009791 Functional Loss - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100087866 chrX:100087867 synonymous SNV . 0 22 hPsi_associated_SNPs_5023 0 0 0 0 1 Nucleus 0.438718593615509 0.438716201467817 0.4314308 0 hPsi_site_10440 iPseU_CNN:0.4314308;iRNA_PseU:0 10441 chr12 81472159 81472159 1 + A G UCEC 81472158 + 81472138 81472178 41 CTGCCGAGCAGATCAGCTGGTACAAGCCCTGGACCAAAACG CTGCCGAGCAGATCAGCTGGTGCAAGCCCTGGACCAAAACG < 41bp 0.831382566146535 0.432017351274298 0.92113674 0.7919395 prediction 0.662765132293069 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81472158 chr12:81472159 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5024 0 0 1 0 2 cytosol 0.438740482198899 0.438744610933129 0.25839448 0 hPsi_site_10441 iPseU_CNN:0.25839448;iRNA_PseU:0 10442 chr5 178392351 178392351 1 + A G ACC 178392350 + 178392330 178392370 41 TTTGTGTGCAGGGCACACCTTACCAAACACCAGAATATCCA TTTGTGTGCAGGGCACACCTTGCCAAACACCAGAATATCCA < 41bp 0.831369460245975 0.421038273675689 0.68608874 0.2664019 prediction 0.662738920491949 Functional Loss - ZNF454 ENSG00000178187 CDS Human protein_coding chr5:178392350 chr5:178392351 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5025 0 0 0 0 0 exosome 0.438688798691359 0.438708121341542 0.37217748 0 hPsi_site_10442 iPseU_CNN:0.37217748;iRNA_PseU:0 10443 chr12 54338891 54338891 1 + A C COAD 54338890 + 54338870 54338910 41 CTAGAGAAGGAATACGCGGCTAGCAAGTTCATCACCAAAGA CTAGAGAAGGAATACGCGGCTCGCAAGTTCATCACCAAAGA < 41bp 0.844884995551804 0.513525921764515 0.23343113 0.23030743 prediction 0.662718147574577 Functional Loss - HOXC13 ENSG00000123364 CDS Human protein_coding chr12:54338890 chr12:54338891 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_5026 0 0 0 1 0 nucleus 0.440598224542642 0.438697470868938 0 0 hPsi_site_10443 iPseU_CNN:0;iRNA_PseU:0 10444 chr17 27013785 27013785 1 + A G UCEC 27013784 + 27013764 27013804 41 ACAACGAGTTGGCCATTCTCTATATGAACAGCAAGAAGTCA ACAACGAGTTGGCCATTCTCTGTATGAACAGCAAGAAGTCA < 41bp 0.83134072727281 0.423866445819809 0.36485153 0.21571964 prediction 0.662681454545619 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27013784 chr17:27013785 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5027 0 0 1 0 1 Cytosol 0.43870626772019 0.43876146275511 0 0 hPsi_site_10444 iPseU_CNN:0;iRNA_PseU:0 10445 chr1 44437514 44437514 1 + A G UCEC 44437513 + 44437493 44437533 41 ACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTGGG ACTCAGGCTGCTGGCAAGCGTGGCTATGTGTTGGCCCTGGG < 41bp 0.83132100114363 0.42034344193452 0.4178656 0.31325215 prediction 0.66264200228726 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437513 chr1:44437514 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_5028 0 0 1 0 0 nucleolus 0.438604131518067 0.435519162260863 0 0 hPsi_site_10445 iPseU_CNN:0;iRNA_PseU:0 10446 chr5 140740646 140740646 1 + A G LUSC 140740645 + 140740625 140740665 41 ATTTTGAGATTGCAAGTAGTTACACTCTGAGTATCGAAGCA ATTTTGAGATTGCAAGTAGTTGCACTCTGAGTATCGAAGCA < 41bp 0.889974898631253 0.558654378781765 0.8959031 0.5717696 prediction 0.662641039698975 Functional Loss - PCDHGB2 ENSG00000253910 CDS Human protein_coding chr5:140740645 chr5:140740646 nonsynonymous SNV 0.928 3 22 hPsi_associated_SNPs_5029 0 0 0 0 0 exosome 0.438720438840353 0.438829941824999 0.648267 0 hPsi_site_10446 iPseU_CNN:0.648267;iRNA_PseU:0 10447 chr16 28845690 28845690 1 + A G OV 28845689 + 28845669 28845709 41 TCAGATGTATCCATATCCTGTATCCAATTCAGTGCCTGGGC TCAGATGTATCCATATCCTGTGTCCAATTCAGTGCCTGGGC < 41bp 0.898301732788107 0.56699789787587 0.3675384 0.21648139 prediction 0.662607669824474 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845689 chr16:28845690 synonymous SNV . 0 22 hPsi_associated_SNPs_5030 0 0 1 0 2 Cytosol 0.438718697923158 0.438717965049406 0 0 hPsi_site_10447 iPseU_CNN:0;iRNA_PseU:0 10448 chr5 140515719 140515719 1 + A G READ 140515718 + 140515698 140515738 41 ATTCGCATTGTCGTCTTGGATAATAATGACAACGCCCCCGA ATTCGCATTGTCGTCTTGGATGATAATGACAACGCCCCCGA < 41bp 0.831289181082506 0.44490517183467 0.3703274 0.18704972 prediction 0.662578362165013 Functional Loss - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140515718 chr5:140515719 nonsynonymous SNV 0.837 1 22 hPsi_associated_SNPs_5031 0 0 0 0 0 Endoplasmic reticulum 0.438731793238306 0.442038841781457 0 0 hPsi_site_10448 iPseU_CNN:0;iRNA_PseU:0 10449 chr1 146651297 146651297 1 + A G UCEC 146651296 + 146651276 146651316 41 AGGACCCATATGGGAATTATTACGTCTCAGGGCCGAGAGGA AGGACCCATATGGGAATTATTGCGTCTCAGGGCCGAGAGGA < 41bp 0.831266970472617 0.499174292793848 0.26228464 0.17431688 prediction 0.662533940945234 Functional Loss - PDIA3P1 ENSG00000237188;ENSG00000273071 ncRNA_intronic Human other chr1:146651296 chr1:146651297 . . 0 22 hPsi_associated_SNPs_5032 0 0 0 2 0 unknown 0.438718592995341 0.438718592998604 0 0 hPsi_site_10449 iPseU_CNN:0;iRNA_PseU:0 10450 chr17 20805633 20805633 1 + A G LUAD 20805632 + 20805612 20805652 41 TGGAGCAGCAGCCATCAGCGTAGACGACGACGAAGTCTCCC TGGAGCAGCAGCCATCAGCGTGGACGACGACGAAGTCTCCC < 41bp 0.831253951834319 0.447287178995045 0.85845006 0.2379066 prediction 0.662507903668639 Functional Loss - CCDC144NL-AS1 ENSG00000233098;ENSG00000265790 ncRNA_exonic Human other chr17:20805632 chr17:20805633 . . 0 22 hPsi_associated_SNPs_5033 0 0 0 0 0 unknown 0.438717964609059 0.438713655266964 0.71690012 0 hPsi_site_10450 iPseU_CNN:0.71690012;iRNA_PseU:0 10451 chr17 26864164 26864164 1 + A G rs137872361 26864163 + 26864143 26864183 41 TGGGAACAGTTGAAGGATGATAGCTTGGCCCTCGACCCCCT TGGGAACAGTTGAAGGATGATGGCTTGGCCCTCGACCCCCT < 41bp 0.831247465209816 0.438757444143749 0.2900294 0.22606558 prediction 0.662494930419633 Functional Loss - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26864163 chr17:26864164 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5034 1 0 0 0 1 exosome 0.438716925841066 0.438718588373113 0 0 hPsi_site_10451 iPseU_CNN:0;iRNA_PseU:0 10452 chr7 136700229 136700229 1 + A G GBM 136700228 + 136700208 136700248 41 TGATCATCATGACTGTGCTATATTGGCACATATCCCGAGCC TGATCATCATGACTGTGCTATGTTGGCACATATCCCGAGCC < 41bp 0.831233233714304 0.429632737595224 0.7434777 0.61620617 prediction 0.662466467428607 Functional Loss - CHRM2 ENSG00000181072 CDS Human protein_coding chr7:136700228 chr7:136700229 nonsynonymous SNV 0.845 4 22 hPsi_associated_SNPs_5035 0 0 0 0 0 exosome 0.43880691978765 0.438765205540923 0.25454306 0 hPsi_site_10452 iPseU_CNN:0.25454306;iRNA_PseU:0 10453 chr17 7483875 7483875 1 + A G LUSC 7483874 + 7483854 7483894 41 ACCTGCTTCTCTCATTCCCCTATGGACACCTCAGCTTTGGA ACCTGCTTCTCTCATTCCCCTGTGGACACCTCAGCTTTGGA < 41bp 0.83122083330093 0.417285479923429 0.27392775 0.22166541 prediction 0.66244166660186 Functional Loss - CD68 ENSG00000129226 CDS Human protein_coding chr17:7483874 chr17:7483875 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_5036 0 0 0 0 2 Endoplasmic reticulum 0.43871856703137 0.438718915338296 0 0 hPsi_site_10453 iPseU_CNN:0;iRNA_PseU:0 10454 chr8 144358475 144358475 1 + A G LUSC 144358474 + 144358454 144358494 41 TCCACACGGGCGAGAAGCCCTACGCCTGCCACGAGTGCGGC TCCACACGGGCGAGAAGCCCTGCGCCTGCCACGAGTGCGGC < 41bp 0.886070092584547 0.554849315213303 0.61025625 0.268851 prediction 0.662441554742489 Functional Loss - GLI4 ENSG00000250571 CDS Human protein_coding chr8:144358474 chr8:144358475 nonsynonymous SNV 0.564 3 22 hPsi_associated_SNPs_5037 0 0 0 0 0 chromatin 0.438896809394695 0.438818152957987 0.2205125 0 hPsi_site_10454 iPseU_CNN:0.2205125;iRNA_PseU:0 10455 chr11 66394655 66394655 1 + A G rs535565284 66394654 + 66394634 66394674 41 CTGTTGGGACAGTCAGTTGGTATGTATCCAAGTCCCTGCTG CTGTTGGGACAGTCAGTTGGTGTGTATCCAAGTCCCTGCTG < 41bp 0.831212750642849 0.452205670939767 0.5803542 0.38868636 prediction 0.662425501285697 Functional Loss - RBM14 ENSG00000239306 UTR3 Human protein_coding chr11:66394654 chr11:66394655 . . 0 22 hPsi_associated_SNPs_5038 0 0 1 1 0 Nucleus 4.41325539416065e-06 0.0643614915602731 0.1607084 0 hPsi_site_10455 iPseU_CNN:0.1607084;iRNA_PseU:0 10456 chr1 246931057 246931057 1 + A G rs3314 246931056 + 246931036 246931076 41 AATTAAACTGCACTTTTTGCTATTTTTGCCTAGTTTTTCGC AATTAAACTGCACTTTTTGCTGTTTTTGCCTAGTTTTTCGC < 41bp 0.831140127744192 0.465391045381096 0.3542791 0.26073867 prediction 0.662280255488384 Functional Loss - SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246931056 chr1:246931057 . . 0 22 hPsi_associated_SNPs_5039 0 0 1 0 0 Ribosome 0.438960226563926 0.440568835936262 0 0 hPsi_site_10456 iPseU_CNN:0;iRNA_PseU:0 10457 chr2 85770819 85770819 1 + A C CESC 85770818 + 85770798 85770838 41 TGGATCTGAAGAAGCCAATTTATCAGAGGACTGCAGCCTAT TGGATCTGAAGAAGCCAATTTCTCAGAGGACTGCAGCCTAT < 41bp 0.846055175231864 0.514920448903943 0.24292842 0.23001674 prediction 0.662269452655843 Functional Loss - MAT2A ENSG00000168906 CDS Human protein_coding chr2:85770818 chr2:85770819 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5040 0 0 1 0 1 Cytosol 0.438830854942008 0.438717696587326 0 0 hPsi_site_10457 iPseU_CNN:0;iRNA_PseU:0 10458 chr20 34144746 34144746 1 + A G rs8825 34144745 + 34144725 34144765 41 GGCTCCCCTCCCACCCCAGGTACTGAGGACAAATCAGTTCT GGCTCCCCTCCCACCCCAGGTGCTGAGGACAAATCAGTTCT < 41bp 0.891384289783114 0.560255709449854 0.33806092 0.19450775 prediction 0.662257160666519 Functional Loss - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34144745 chr20:34144746 synonymous SNV . 0 22 hPsi_associated_SNPs_5041 0 0 1 0 1 Ribosome 0.4387185929951 0.438718592995102 0 0 hPsi_site_10458 iPseU_CNN:0;iRNA_PseU:0 10459 chr14 97014175 97014175 1 + A G GBM 97014174 + 97014154 97014194 41 AGCAAGATGTTTGAGGTGGATATGAAAATTGCTGCAATGCA AGCAAGATGTTTGAGGTGGATGTGAAAATTGCTGCAATGCA < 41bp 0.831121634698924 0.469712265906383 0.5110538 0.2679867 prediction 0.662243269397848 Functional Loss - PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97014174 chr14:97014175 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5042 0 0 1 0 2 Ribosome 0.438502278451065 0.43871727141632 0.0221076 0 hPsi_site_10459 iPseU_CNN:0.0221076;iRNA_PseU:0 10460 chr1 111784037 111784037 1 + A G rs199592205 111784036 + 111784016 111784056 41 AGGGGAACCAGTGGGTGGGCTATGATGATGTGAAGAGTATG AGGGGAACCAGTGGGTGGGCTGTGATGATGTGAAGAGTATG < 41bp 0.831121605899874 0.42959745827719 0.2701194 0.23377323 prediction 0.662243211799748 Functional Loss - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111784036 chr1:111784037 nonsynonymous SNV 0.970 2 22 hPsi_associated_SNPs_5043 0 0 0 0 2 exosome 0.438733673638715 0.438748041924496 0 0 hPsi_site_10460 iPseU_CNN:0;iRNA_PseU:0 10461 chrX 106845696 106845696 1 + A G rs540091885 106845695 + 106845675 106845715 41 TCTCACTGCCCGAGGAGGTGTACCGGAAGCCTGCCGAGCTA TCTCACTGCCCGAGGAGGTGTGCCGGAAGCCTGCCGAGCTA < 41bp 0.888335172054858 0.557232956484148 0.59849787 0.24332035 prediction 0.66220443114142 Functional Loss - FRMPD3 ENSG00000147234 CDS Human protein_coding chrX:106845695 chrX:106845696 nonsynonymous SNV 0.929 1 22 hPsi_associated_SNPs_5044 0 0 0 0 0 exosome 0.438715683046367 0.438720488448643 0.19699574 0 hPsi_site_10461 iPseU_CNN:0.19699574;iRNA_PseU:0 10462 chr1 1119380 1119380 1 + A G UCEC 1119379 + 1119359 1119399 41 TCATTGCCTGCACCACACCCTACATGATCTTCTTTGGCCAC TCATTGCCTGCACCACACCCTGCATGATCTTCTTTGGCCAC < 41bp 0.898104548852408 0.567006198660717 0.8440011 0.37243953 prediction 0.662196700383382 Functional Loss - TTLL10 ENSG00000162571 CDS Human protein_coding chr1:1119379 chr1:1119380 nonsynonymous SNV 0.942 1 22 hPsi_associated_SNPs_5045 0 0 0 0 2 exosome 0.438517882675347 0.43854295504104 0.6880022 0 hPsi_site_10462 iPseU_CNN:0.6880022;iRNA_PseU:0 10463 chr17 6690164 6690164 1 + A G rs7213731 6690163 + 6690143 6690183 41 GGAGCTGCACCTCCTCATCATATCCTGCAGGAAGTTGTTTT GGAGCTGCACCTCCTCATCATGTCCTGCAGGAAGTTGTTTT < 41bp 0.831086089724506 0.418329104258431 0.46077615 0.24582931 prediction 0.662172179449012 Functional Loss - FBXO39 ENSG00000177294 CDS Human protein_coding chr17:6690163 chr17:6690164 nonsynonymous SNV 0.970 0 22 hPsi_associated_SNPs_5046 0 0 0 0 0 exosome 0.438718587091418 0.438718230325534 0 0 hPsi_site_10463 iPseU_CNN:0;iRNA_PseU:0 10464 chr2 99778466 99778466 1 + A G COAD 99778465 + 99778445 99778485 41 AATTGCTTCCAGTTACTTTGTAACTGCCAGGTCCCAGCAGC AATTGCTTCCAGTTACTTTGTGACTGCCAGGTCCCAGCAGC < 41bp 0.879609159602939 0.548539027635936 0.72489846 0.29825413 prediction 0.662140263934005 Functional Loss - LIPT1 ENSG00000144182 CDS Human protein_coding chr2:99778465 chr2:99778466 nonsynonymous SNV 0.420 0 22 hPsi_associated_SNPs_5047 0 0 0 0 0 chromatin 0.438721642198889 0.438737083236159 0.44979692 0 hPsi_site_10464 iPseU_CNN:0.44979692;iRNA_PseU:0 10465 chr2 223423443 223423443 1 + A G READ 223423442 + 223423422 223423462 41 CCTCTTGGTTCGTCAGCTTGTACAAAATCTCTCACTGCAAG CCTCTTGGTTCGTCAGCTTGTGCAAAATCTCTCACTGCAAG < 41bp 0.831055044846767 0.42461177344203 0.66520184 0.36643636 prediction 0.662110089693534 Functional Loss - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423442 chr2:223423443 synonymous SNV . 0 22 hPsi_associated_SNPs_5048 0 0 1 0 0 Ribosome 0.438727210259342 0.438630981834726 0.33040368 0 hPsi_site_10465 iPseU_CNN:0.33040368;iRNA_PseU:0 10466 chr8 18258279 18258279 1 + A G rs55700793 18258278 + 18258258 18258298 41 AATACAGATCTGGTCGAGTTTAAAACTCTCACTGAGGAAGA AATACAGATCTGGTCGAGTTTGAAACTCTCACTGAGGAAGA < 41bp 0.831013318826487 0.446990313693612 0.78321344 0.5019657 prediction 0.662026637652975 Functional Loss - NAT2 ENSG00000156006 CDS Human protein_coding chr8:18258278 chr8:18258279 nonsynonymous SNV 0.674 1 22 hPsi_associated_SNPs_5049 0 0 0 0 0 exosome 0.43871522927792 0.438715495890908 0.56249548 0 hPsi_site_10466 iPseU_CNN:0.56249548;iRNA_PseU:0 10467 chr10 104557771 104557771 1 + A G STAD 104557770 + 104557750 104557790 41 GATAAGGAAGCCTGTGTGGGTACCAACAATCAAAGCTACAT GATAAGGAAGCCTGTGTGGGTGCCAACAATCAAAGCTACAT < 41bp 0.831003461749452 0.429461723365628 0.88534343 0.51335335 prediction 0.662006923498903 Functional Loss - WBP1L ENSG00000166272 CDS Human protein_coding chr10:104557770 chr10:104557771 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_5050 0 0 1 0 2 chromatin 0.43871896082949 0.438716978552138 0.74398016 0 hPsi_site_10467 iPseU_CNN:0.74398016;iRNA_PseU:0 10468 chr1 22923868 22923868 1 + A C LUSC 22923867 + 22923847 22923887 41 AGCTCCCAGAGCCCCAGTTCTATGCGGAACCCCACACCTAC AGCTCCCAGAGCCCCAGTTCTCTGCGGAACCCCACACCTAC < 41bp 0.830986428018211 0.468157499942489 0.8345808 0.47364375 prediction 0.661972856036423 Functional Loss - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22923867 chr1:22923868 nonsynonymous SNV 0.537 3 22 hPsi_associated_SNPs_5051 0 0 0 0 1 exosome 0.438132650854002 0.438719295153746 0.6691616 0 hPsi_site_10468 iPseU_CNN:0.6691616;iRNA_PseU:0 10469 chr15 72432583 72432583 1 + A G rs930871 72432582 + 72432562 72432602 41 GGAGAATGGAAAGATCTCATTACCACACTTGCTAAAAAGTA GGAGAATGGAAAGATCTCATTGCCACACTTGCTAAAAAGTA < 41bp 0.830971530724522 0.42835162920083 0.23300573 0.14386848 prediction 0.661943061449043 Functional Loss - SENP8 ENSG00000166192 CDS Human protein_coding chr15:72432582 chr15:72432583 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_5052 0 0 0 0 0 Cytosol 0.438813654844576 0.438773219740514 0 0 hPsi_site_10469 iPseU_CNN:0;iRNA_PseU:0 10470 chr11 75277628 75277628 1 + A G rs584961 75277627 + 75277607 75277647 41 CGTGGTGGTGGCCTCGTCGCTAGGGCTCGTGTCGCTGGGCG CGTGGTGGTGGCCTCGTCGCTGGGGCTCGTGTCGCTGGGCG < 41bp 0.830958770652176 0.410454446836202 0.7102917 0.36076468 prediction 0.661917541304353 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277627 chr11:75277628 synonymous SNV . 0 22 hPsi_associated_SNPs_5053 2 0 1 0 0 Ribosome 0.43870845612261 0.438718592986593 0.4205834 0 hPsi_site_10470 iPseU_CNN:0.4205834;iRNA_PseU:0 10471 chr4 57797265 57797265 1 + A G SARC 57797264 + 57797244 57797284 41 CCAGAAGGAGCCTGTTCAGATAGAGCTGTCTCCTCCCATGG CCAGAAGGAGCCTGTTCAGATGGAGCTGTCTCCTCCCATGG < 41bp 0.841180829451121 0.510234450356941 0.2910677 0.22775593 prediction 0.661892758188359 Functional Loss - REST ENSG00000084093 CDS Human protein_coding chr4:57797264 chr4:57797265 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5054 0 0 1 0 0 Ribosome 0.438718591970626 0.438718595164884 0 0 hPsi_site_10471 iPseU_CNN:0;iRNA_PseU:0 10472 chr3 184007447 184007447 1 + A G rs141024211 184007446 + 184007426 184007466 41 CAGGCAGATGCCATCTATGATATGATTGGTTTCCCAGACTT CAGGCAGATGCCATCTATGATGTGATTGGTTTCCCAGACTT < 41bp 0.830943352770525 0.428994638289491 0.37536022 0.30485827 prediction 0.661886705541049 Functional Loss - ECE2 ENSG00000145194 CDS Human protein_coding chr3:184007446 chr3:184007447 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5055 0 0 0 0 2 Ribosome 0.438718616073126 0.438718594958043 0 0 hPsi_site_10472 iPseU_CNN:0;iRNA_PseU:0 10473 chr6 42988839 42988839 1 + A G rs55796558 42988838 + 42988818 42988858 41 CTTCCCCCTCCCCCTTTGCCTATCCCCTCCCCTCTGCTTGA CTTCCCCCTCCCCCTTTGCCTGTCCCCTCCCCTCTGCTTGA < 41bp 0.830918125078414 0.471169269876004 0.573853 0.3114906 prediction 0.661836250156828 Functional Loss - KLHDC3 ENSG00000124702 UTR3 Human protein_coding chr6:42988838 chr6:42988839 . 0.002 0 22 hPsi_associated_SNPs_5056 0 0 1 0 0 Ribosome 0.438718592994764 0.438718592995071 0.147706 0 hPsi_site_10473 iPseU_CNN:0.147706;iRNA_PseU:0 10474 chr22 40432239 40432239 1 + A G rs574222318 40432238 + 40432218 40432258 41 GAGATAGGATCTCACTGTGTTACCCAAGCTAGACTTGAACT GAGATAGGATCTCACTGTGTTGCCCAAGCTAGACTTGAACT < 41bp 0.830916741661611 0.471065626421239 0.38887697 0.21981502 prediction 0.661833483323223 Functional Loss - LOC100130899 ENSG00000133477 UTR3 Human protein_coding chr22:40432238 chr22:40432239 . . 0 22 hPsi_associated_SNPs_5057 0 0 0 0 0 unknown 0.438942300814358 0.438720616058126 0 0 hPsi_site_10474 iPseU_CNN:0;iRNA_PseU:0 10475 chr9 2718962 2718962 1 + A G STAD 2718961 + 2718941 2718981 41 GCTTCACGCTGCGCCAGTGCTACCAGCAGGTGGGCTGCCTG GCTTCACGCTGCGCCAGTGCTGCCAGCAGGTGGGCTGCCTG < 41bp 0.830916687605592 0.440060929312613 0.43126887 0.2762264 prediction 0.661833375211183 Functional Loss - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718961 chr9:2718962 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5058 0 0 0 0 0 insoluble cytoplasm 0.436996388837219 0.439493469320398 0 0 hPsi_site_10475 iPseU_CNN:0;iRNA_PseU:0 10476 chr1 155300638 155300638 1 + A G rs148349236 155300637 + 155300617 155300657 41 GGAATGTCTTCCTTCCTATCTATCTGCAAAATGGAAATCTA GGAATGTCTTCCTTCCTATCTGTCTGCAAAATGGAAATCTA < 41bp 0.830883692401106 0.486355357552641 0.28184807 0.2339504 prediction 0.661767384802213 Functional Loss - RUSC1 ENSG00000160753 UTR3 Human protein_coding chr1:155300637 chr1:155300638 . . 0 22 hPsi_associated_SNPs_5059 0 0 1 0 0 Cytosol 0.438718659520168 0.438718568517974 0 0 hPsi_site_10476 iPseU_CNN:0;iRNA_PseU:0 10477 chr20 57266852 57266852 1 + A G LIHC 57266851 + 57266831 57266871 41 ATGGAGGTAACAGAGGAGGGTACCAACCAAAGGCCCTTGAG ATGGAGGTAACAGAGGAGGGTGCCAACCAAAGGCCCTTGAG < 41bp 0.830879861512345 0.454926105670477 0.75379 0.27451295 prediction 0.66175972302469 Functional Loss - NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57266851 chr20:57266852 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_5060 0 0 1 0 2 cytosol 0.438718592993573 0.438718592995102 0.50758 0 hPsi_site_10477 iPseU_CNN:0.50758;iRNA_PseU:0 10478 chr20 2290974 2290974 1 + A G COAD 2290973 + 2290953 2290993 41 CCAGCGCACCCATAGGACGGTACACAATGGCCCTCCAGATC CCAGCGCACCCATAGGACGGTGCACAATGGCCCTCCAGATC < 41bp 0.907248665211992 0.576382430474593 0.73660177 0.24449903 prediction 0.661732469474798 Functional Loss - TGM3 ENSG00000125780 CDS Human protein_coding chr20:2290973 chr20:2290974 nonsynonymous SNV 0.028 5 22 hPsi_associated_SNPs_5061 0 0 0 0 1 exosome 0.438698278693138 0.438658055895819 0.47320354 0 hPsi_site_10478 iPseU_CNN:0.47320354;iRNA_PseU:0 10479 chr1 147094194 147094194 1 + A G COAD 147094193 + 147094173 147094213 41 TCCCAGAACCCACTCTCTATTATGATGTCTCGAATGTCCAA TCCCAGAACCCACTCTCTATTGTGATGTCTCGAATGTCCAA < 41bp 0.896450986629848 0.5656027686708 0.5763029 0.3302016 prediction 0.661696435918096 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147094193 chr1:147094194 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5062 0 0 1 0 0 Nucleus 0.4386994611408 0.438718428058118 0.1526058 0 hPsi_site_10479 iPseU_CNN:0.1526058;iRNA_PseU:0 10480 chr19 2271908 2271908 1 + A G BLCA 2271907 + 2271887 2271927 41 TGCTGAGTGGCGGCAGCCTCTACATCGAGATCCCGGGCGGC TGCTGAGTGGCGGCAGCCTCTGCATCGAGATCCCGGGCGGC < 41bp 0.830844342504798 0.416615507263002 0.8131809 0.6463443 prediction 0.661688685009597 Functional Loss - OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271907 chr19:2271908 nonsynonymous SNV 0.956 3 22 hPsi_associated_SNPs_5063 0 0 1 0 1 Ribosome 0.43872613838223 0.439756472268272 0.3336732 0 hPsi_site_10480 iPseU_CNN:0.3336732;iRNA_PseU:0 10481 chr5 161128750 161128750 1 + A G STAD 161128749 + 161128729 161128769 41 GTAGTTTATCTTTCCAAAGATACAATGGAAGTCAGTAGCAG GTAGTTTATCTTTCCAAAGATGCAATGGAAGTCAGTAGCAG < 41bp 0.879861218550137 0.549017958337834 0.41279778 0.28610018 prediction 0.661686520424607 Functional Loss - GABRA6 ENSG00000145863 CDS Human protein_coding chr5:161128749 chr5:161128750 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5064 0 0 0 0 0 unknown 0.438813396848001 0.438750322326971 0 0 hPsi_site_10481 iPseU_CNN:0;iRNA_PseU:0 10482 chrX 49030725 49030725 1 + A G LUAD 49030724 + 49030704 49030744 41 GCCTCTTTGGCTATGATGCCTATGTCACCTTCCCCGTTCGG GCCTCTTTGGCTATGATGCCTGTGTCACCTTCCCCGTTCGG < 41bp 0.898004173409696 0.567171386971526 0.43899733 0.4432419 prediction 0.661665572876341 Functional Loss - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49030724 chrX:49030725 nonsynonymous SNV 0.622 4 22 hPsi_associated_SNPs_5065 0 0 1 0 2 Ribosome 0.438718878547522 0.43871931390354 0 0 hPsi_site_10482 iPseU_CNN:0;iRNA_PseU:0 10483 chr8 19683994 19683994 1 + A G LIHC 19683993 + 19683973 19684013 41 TTGAAGATGTATCGAATGTGTATGGTGATGTAGAAATTGAT TTGAAGATGTATCGAATGTGTGTGGTGATGTAGAAATTGAT < 41bp 0.830830844819924 0.4249837256829 0.37493852 0.28349814 prediction 0.661661689639847 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19683993 chr8:19683994 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_5066 0 0 1 0 2 Cytosol 0.439127136058083 0.438340075272614 0 0 hPsi_site_10483 iPseU_CNN:0;iRNA_PseU:0 10484 chr16 67316154 67316154 1 + A G HNSC 67316153 + 67316133 67316173 41 GGTCCTGATGCAGCAGGTGCTAGACTCGCCATGGCTGGCAT GGTCCTGATGCAGCAGGTGCTGGACTCGCCATGGCTGGCAT < 41bp 0.830774228950237 0.416658421842749 0.4255663 0.24770936 prediction 0.661548457900475 Functional Loss - PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67316153 chr16:67316154 synonymous SNV . 0 22 hPsi_associated_SNPs_5067 0 0 0 0 2 Cytosol 0.438412127205025 0.438351388295773 0 0 hPsi_site_10484 iPseU_CNN:0;iRNA_PseU:0 10485 chr22 22599607 22599607 1 + A G STAD 22599606 + 22599586 22599626 41 ATGTGGCCAGGAACAGGGGGTATTTGAGCATCTCTGAGCTG ATGTGGCCAGGAACAGGGGGTGTTTGAGCATCTCTGAGCTG < 41bp 0.885481718210507 0.554714740712116 0.75855625 0.3739512 prediction 0.66153395499678 Functional Loss - VPREB1 ENSG00000169575 CDS Human protein_coding chr22:22599606 chr22:22599607 nonsynonymous SNV 0.001 4 22 hPsi_associated_SNPs_5068 0 0 0 0 0 unknown 0.439171499205548 0.438721622016816 0.5171125 0 hPsi_site_10485 iPseU_CNN:0.5171125;iRNA_PseU:0 10486 chr2 204732714 204732714 1 + A G rs231775 204732713 + 204732693 204732733 41 AAGGCTCAGCTGAACCTGGCTACCAGGACCTGGCCCTGCAC AAGGCTCAGCTGAACCTGGCTGCCAGGACCTGGCCCTGCAC < 41bp 0.830749916933194 0.449629535388674 0.49363968 0.23654744 prediction 0.661499833866387 Functional Loss - CTLA4 ENSG00000163599 CDS Human protein_coding chr2:204732713 chr2:204732714 nonsynonymous SNV 0.060 0 22 hPsi_associated_SNPs_5069 6 1 0 0 1 exosome 0.438718588351492 0.438684094503799 0 0 hPsi_site_10486 iPseU_CNN:0;iRNA_PseU:0 10487 chr5 178392099 178392099 1 + A G rs200467892 178392098 + 178392078 178392118 41 TTTCACCAGAGTACGCACCTTATCCATCACCAAAGAATTCA TTTCACCAGAGTACGCACCTTGTCCATCACCAAAGAATTCA < 41bp 0.830749722846888 0.425440540810439 0.58518803 0.2266609 prediction 0.661499445693776 Functional Loss - ZNF454 ENSG00000178187 CDS Human protein_coding chr5:178392098 chr5:178392099 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_5070 0 0 0 0 0 exosome 0.438721517967965 0.438740209292329 0.17037606 0 hPsi_site_10487 iPseU_CNN:0.17037606;iRNA_PseU:0 10488 chr1 47883024 47883024 1 + A G rs2820969 47883023 + 47883003 47883043 41 GCCCTCGAGCGCCCCATCTCTACCCCCCACCCTGGCTTGGA GCCCTCGAGCGCCCCATCTCTGCCCCCCACCCTGGCTTGGA < 41bp 0.848819939521149 0.518071465661402 0.68410397 0.27634284 prediction 0.661496947719493 Functional Loss - LINC01389 ENSG00000186790 UTR3 Human protein_coding chr1:47883023 chr1:47883024 . . 0 22 hPsi_associated_SNPs_5071 0 0 0 0 0 unknown 0.438718480772283 0.438718468468715 0.36820794 0 hPsi_site_10488 iPseU_CNN:0.36820794;iRNA_PseU:0 10489 chr1 156552053 156552053 1 + A G COAD 156552052 + 156552032 156552072 41 ATAACGATCTAGGCCTGGGCTACTCCCAGCTCCAGCTGTTC ATAACGATCTAGGCCTGGGCTGCTCCCAGCTCCAGCTGTTC < 41bp 0.900539184862437 0.569793154014957 0.6069656 0.2591837 prediction 0.66149206169496 Functional Loss - TTC24 ENSG00000187862 CDS Human protein_coding chr1:156552052 chr1:156552053 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_5072 0 0 0 0 1 exosome 0.438718593834499 0.438718593020515 0.2139312 0 hPsi_site_10489 iPseU_CNN:0.2139312;iRNA_PseU:0 10490 chr16 67859140 67859140 1 + A G UCEC 67859139 + 67859119 67859159 41 CAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCA CAGACCTGAATGAGCTGCGGTGCCAGCGGGAGGACATGTCA < 41bp 0.830737107923405 0.420937891166962 0.66529566 0.27869582 prediction 0.66147421584681 Functional Loss - TSNAXIP1 ENSG00000102904 CDS Human protein_coding chr16:67859139 chr16:67859140 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5073 0 0 0 0 1 exosome 0.438718603911018 0.438718542259901 0.33059132 0 hPsi_site_10490 iPseU_CNN:0.33059132;iRNA_PseU:0 10491 chr11 8118305 8118305 1 + A G UCEC 8118304 + 8118284 8118324 41 TAGCTCCAGCTCCTCCCAGCTAAATAGTAACACCCGCCCCA TAGCTCCAGCTCCTCCCAGCTGAATAGTAACACCCGCCCCA < 41bp 0.830719545093324 0.40383134501849 0.2593963 0.17782873 prediction 0.661439090186648 Functional Loss - TUB ENSG00000166402 CDS Human protein_coding chr11:8118304 chr11:8118305 synonymous SNV . 0 22 hPsi_associated_SNPs_5074 0 0 1 0 1 nucleus 0.43871873204001 0.438785305346974 0 0 hPsi_site_10491 iPseU_CNN:0;iRNA_PseU:0 10492 chr12 122268062 122268062 1 + A G COAD 122268061 + 122268041 122268081 41 ATTAACGTCAATGAGGAGATTACCTATGACTATAAGTTCCC ATTAACGTCAATGAGGAGATTGCCTATGACTATAAGTTCCC < 41bp 0.830683012539808 0.442034171248173 0.3409844 0.24304387 prediction 0.661366025079617 Functional Loss - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122268061 chr12:122268062 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_5075 0 0 1 0 1 chromatin 0.440148908374693 0.438703443613388 0 0 hPsi_site_10492 iPseU_CNN:0;iRNA_PseU:0 10493 chr1 40432312 40432312 1 + A C COAD 40432311 + 40432291 40432331 41 GCAGCGGGGGTCATTGTCTGTATCTATATAATCTGTGCTGT GCAGCGGGGGTCATTGTCTGTCTCTATATAATCTGTGCTGT < 41bp 0.878689497034245 0.548009769594626 0.3723805 0.32544285 prediction 0.661359454879237 Functional Loss - MFSD2A ENSG00000168389 CDS Human protein_coding chr1:40432311 chr1:40432312 nonsynonymous SNV 0.673 1 22 hPsi_associated_SNPs_5076 0 0 0 1 3 Ribosome 0.437595862360441 0.438500088187542 0 0 hPsi_site_10493 iPseU_CNN:0;iRNA_PseU:0 10494 chr17 74729443 74729443 1 + A G LUSC 74729442 + 74729422 74729462 41 CCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGGCA CCCAAGGTCCAATTGTGGTCTGCTTATCAAGTTAGGAGGCA < 41bp 0.830671813117474 0.426002475254496 0.22324711 0.16028467 prediction 0.661343626234947 Functional Loss - METTL23 ENSG00000181038 CDS Human protein_coding chr17:74729442 chr17:74729443 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5077 0 0 1 1 1 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_10494 iPseU_CNN:0;iRNA_PseU:0 10495 chrX 54471028 54471028 1 + A G rs11544223 54471027 + 54471007 54471047 41 TGGGCCCTTATTTGCTGTTCTAAGAGTTGTCTGTAGGGGTT TGGGCCCTTATTTGCTGTTCTGAGAGTTGTCTGTAGGGGTT < 41bp 0.830640811683521 0.443771009914425 0.31268522 0.2537285 prediction 0.661281623367041 Functional Loss - TSR2 ENSG00000158526 UTR3 Human protein_coding chrX:54471027 chrX:54471028 . . 0 22 hPsi_associated_SNPs_5078 0 0 1 0 0 Ribosome 0.438718900251713 0.438718593367104 0 0 hPsi_site_10495 iPseU_CNN:0;iRNA_PseU:0 10496 chr22 39427916 39427916 1 + A G DLBC 39427915 + 39427895 39427935 41 GCTACTTCTGGGATACAGATTACCAGGAGGGGCTCTGCAGC GCTACTTCTGGGATACAGATTGCCAGGAGGGGCTCTGCAGC < 41bp 0.830613383798664 0.421079251906499 0.2630015 0.21023357 prediction 0.661226767597327 Functional Loss - APOBEC3D ENSG00000243811 CDS Human protein_coding chr22:39427915 chr22:39427916 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_5079 0 0 0 0 1 Nucleus 0.438795327723559 0.438718483373125 0 0 hPsi_site_10496 iPseU_CNN:0;iRNA_PseU:0 10497 chr7 55273090 55273090 1 + A G LUSC 55273089 + 55273069 55273109 41 CTGCAGTGGGCAACCCCGAGTATCTCAACACTGTCCAGCCC CTGCAGTGGGCAACCCCGAGTGTCTCAACACTGTCCAGCCC < 41bp 0.830595653105646 0.429000830830898 0.5454914 0.2900304 prediction 0.661191306211292 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55273089 chr7:55273090 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5080 0 0 1 0 0 Nucleus 0.438756857811882 0.438804353749919 0.0909827999999999 0 hPsi_site_10497 iPseU_CNN:0.0909827999999999;iRNA_PseU:0 10498 chr12 53431273 53431273 1 + A G LGG 53431272 + 53431252 53431292 41 GATTGCCACTCTCCAACTTCTAAACCTCCCAAACCTGATCA GATTGCCACTCTCCAACTTCTGAACCTCCCAAACCTGATCA < 41bp 0.899977568592435 0.569394782548425 0.41259763 0.31355214 prediction 0.66116557208802 Functional Loss - EIF4B ENSG00000063046 CDS Human protein_coding chr12:53431272 chr12:53431273 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5081 0 0 0 0 1 Cytosol 0.438718592989062 0.438718378215164 0 0 hPsi_site_10498 iPseU_CNN:0;iRNA_PseU:0 10499 chr11 5443969 5443969 1 + A C rs58283839 5443968 + 5443948 5443988 41 CCCACCTTCTCTCTCGCTCCTATTGCCTCCACCAGGATATG CCCACCTTCTCTCTCGCTCCTCTTGCCTCCACCAGGATATG < 41bp 0.830572515798582 0.487030487474882 0.30795825 0.2534485 prediction 0.661145031597164 Functional Loss - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5443968 chr11:5443969 nonsynonymous SNV 0.941 4 22 hPsi_associated_SNPs_5082 0 0 0 0 0 chromatin 0.438718592905779 0.438718587514808 0 0 hPsi_site_10499 iPseU_CNN:0;iRNA_PseU:0 10500 chr11 74907660 74907660 1 + A C SKCM 74907659 + 74907639 74907679 41 ACCCCAGCACTCGTGTGGAATACATCACACCCTGCCACGCA ACCCCAGCACTCGTGTGGAATCCATCACACCCTGCCACGCA < 41bp 0.830571230104552 0.457280116870324 0.41094223 0.23905692 prediction 0.661142460209105 Functional Loss - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74907659 chr11:74907660 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_5083 0 0 1 0 1 cytosol 0.438732490424765 0.438724245885446 0 0 hPsi_site_10500 iPseU_CNN:0;iRNA_PseU:0 10501 chrX 100349723 100349723 1 + A G UCEC 100349722 + 100349702 100349742 41 AGATGTGGCCAACTTCTTCCTACTGTTGCTGGTGTTGGCTG AGATGTGGCCAACTTCTTCCTGCTGTTGCTGGTGTTGGCTG < 41bp 0.830561422640168 0.428224554277166 0.26750016 0.24643028 prediction 0.661122845280336 Functional Loss - TMEM35A ENSG00000126950 CDS Human protein_coding chrX:100349722 chrX:100349723 synonymous SNV . 0 22 hPsi_associated_SNPs_5084 0 0 0 0 0 exosome 0.438718614880312 0.438718964777228 0 0 hPsi_site_10501 iPseU_CNN:0;iRNA_PseU:0 10502 chr11 33053070 33053070 1 + A C UCEC 33053069 + 33053049 33053089 41 TTGATGCCATTGGCAGATATTACAGTAGTAGGGAACCTCTG TTGATGCCATTGGCAGATATTCCAGTAGTAGGGAACCTCTG < 41bp 0.85361029471672 0.523054426099335 0.32245192 0.40340075 prediction 0.661111737234771 Functional Loss - DEPDC7 ENSG00000121690 CDS Human protein_coding chr11:33053069 chr11:33053070 nonsynonymous SNV 0.293 4 22 hPsi_associated_SNPs_5085 0 0 0 0 1 Cytosol 0.438725725684385 0.438718592766952 0 0 hPsi_site_10502 iPseU_CNN:0;iRNA_PseU:0 10503 chr5 42719412 42719412 1 + A G UCEC 42719411 + 42719391 42719431 41 CTATACCTCCATTCATATAGTACAGTCCCCACAGGGCCTCA CTATACCTCCATTCATATAGTGCAGTCCCCACAGGGCCTCA < 41bp 0.830549661461151 0.449540013308331 0.6262219 0.35518605 prediction 0.661099322922302 Functional Loss - GHR ENSG00000112964 CDS Human protein_coding chr5:42719411 chr5:42719412 synonymous SNV . 0 22 hPsi_associated_SNPs_5086 0 0 0 0 0 Nucleus 0.438718946170003 0.438718386979317 0.2524438 0 hPsi_site_10503 iPseU_CNN:0.2524438;iRNA_PseU:0 10504 chr19 46887054 46887054 1 + A G STAD 46887053 + 46887033 46887073 41 TCAGACAGAGAAGATTACAGTATGTGGGGACACCCATGGCC TCAGACAGAGAAGATTACAGTGTGTGGGGACACCCATGGCC < 41bp 0.906072085982841 0.575536864158767 0.6468568 0.38889343 prediction 0.661070443648148 Functional Loss - PPP5C ENSG00000011485 CDS Human protein_coding chr19:46887053 chr19:46887054 synonymous SNV . 0 22 hPsi_associated_SNPs_5087 0 0 1 0 3 Ribosome 0.438718592995079 0.438718592995097 0.2937136 0 hPsi_site_10504 iPseU_CNN:0.2937136;iRNA_PseU:0 10505 chrX 54956161 54956161 1 + A C SKCM 54956160 + 54956140 54956180 41 ACCAGTGCTGACTTTGGCGGTACACTAAGCACCAGTGTCTG ACCAGTGCTGACTTTGGCGGTCCACTAAGCACCAGTGTCTG < 41bp 0.830527016882976 0.477670382852326 0.93043375 0.33065647 prediction 0.661054033765953 Functional Loss - TRO ENSG00000067445 CDS Human protein_coding chrX:54956160 chrX:54956161 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_5088 0 0 0 0 0 exosome 0.446639794850586 0.438837085674491 0.8608675 0 hPsi_site_10505 iPseU_CNN:0.8608675;iRNA_PseU:0 10506 chr7 66774048 66774048 1 + A G rs143833366 66774047 + 66774027 66774067 41 CTCCTCCATGATGACTTCCCTATGGACAACCTCATCTCCCT CTCCTCCATGATGACTTCCCTGTGGACAACCTCATCTCCCT < 41bp 0.830503272755853 0.440248095384145 0.4452517 0.2973297 prediction 0.661006545511707 Functional Loss - STAG3L4 ENSG00000106610 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:66774047 chr7:66774048 . . 0 22 hPsi_associated_SNPs_5089 0 0 1 0 1 unknown 0.438391927295175 0.438751167112752 0 0 hPsi_site_10506 iPseU_CNN:0;iRNA_PseU:0 10507 chr11 129722451 129722451 1 + A G UCEC 129722450 + 129722430 129722470 41 GGCTGTGTTGGTCAGTGAAGTACCCGCTGAAGTACTTTAGC GGCTGTGTTGGTCAGTGAAGTGCCCGCTGAAGTACTTTAGC < 41bp 0.830452047914953 0.415260110702061 0.7414913 0.17224538 prediction 0.660904095829906 Functional Loss - TMEM45B ENSG00000151715 CDS Human protein_coding chr11:129722450 chr11:129722451 nonsynonymous SNV 0.966 1 22 hPsi_associated_SNPs_5090 0 0 1 0 1 Ribosome 0.4387546408728 0.438698286105708 0.4829826 0 hPsi_site_10507 iPseU_CNN:0.4829826;iRNA_PseU:0 10508 chr19 41133192 41133192 1 + A G rs35809725 41133191 + 41133171 41133211 41 GCCCGGGCACCCGCTGGCCCTATCGGTCCCGGGACACCCGC GCCCGGGCACCCGCTGGCCCTGTCGGTCCCGGGACACCCGC < 41bp 0.830418126257206 0.42791605928826 0.40852523 0.27651456 prediction 0.660836252514411 Functional Loss - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41133191 chr19:41133192 nonsynonymous SNV 0.980 2 22 hPsi_associated_SNPs_5091 0 0 1 0 1 Cytosol 0.438478406325021 0.438125689740006 0 0 hPsi_site_10508 iPseU_CNN:0;iRNA_PseU:0 10509 chr14 20388871 20388871 1 + A G LUAD 20388870 + 20388850 20388890 41 TGTTTCTTCTCTGTGTTGTATACAGTCATTGTGCTGGGAAA TGTTTCTTCTCTGTGTTGTATGCAGTCATTGTGCTGGGAAA < 41bp 0.86297541041977 0.532587331752131 0.30261457 0.27321404 prediction 0.660776157335278 Functional Loss - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20388870 chr14:20388871 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5092 0 0 0 0 0 unknown 0.438718463404126 0.438514149188767 0 0 hPsi_site_10509 iPseU_CNN:0;iRNA_PseU:0 10510 chr1 174975919 174975919 1 + A G STAD 174975918 + 174975898 174975938 41 AAGTTTGTGAAAATCTACATTACCTTAACTGGAGTTCATCA AAGTTTGTGAAAATCTACATTGCCTTAACTGGAGTTCATCA < 41bp 0.830382411145539 0.427084857941988 0.5082975 0.2843405 prediction 0.660764822291077 Functional Loss - CACYBP ENSG00000116161 CDS Human protein_coding chr1:174975918 chr1:174975919 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_5093 0 0 1 0 2 Cytosol 0.43976673515958 0.439686050516942 0.0165949999999999 0 hPsi_site_10510 iPseU_CNN:0.0165949999999999;iRNA_PseU:0 10511 chr1 65255163 65255163 1 + A G rs116614592 65255162 + 65255142 65255182 41 TGCCATGTTGCAAGTTCTTCTACAGCCCCAGTTATGTGGAC TGCCATGTTGCAAGTTCTTCTGCAGCCCCAGTTATGTGGAC < 41bp 0.830374714892005 0.414952464196768 0.56795704 0.40284476 prediction 0.66074942978401 Functional Loss - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65255162 chr1:65255163 synonymous SNV . 0 22 hPsi_associated_SNPs_5094 0 0 0 0 2 Ribosome 0.438673879950697 0.438704269227326 0.13591408 0 hPsi_site_10511 iPseU_CNN:0.13591408;iRNA_PseU:0 10512 chrX 38664471 38664471 1 + A G STAD 38664470 + 38664450 38664490 41 CTCGGGACATGTACAGCCACTACGTGCTTCTCAAGTCCATC CTCGGGACATGTACAGCCACTGCGTGCTTCTCAAGTCCATC < 41bp 0.895879374714783 0.565519129771383 0.7299292 0.33976847 prediction 0.660720489886802 Functional Loss - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664470 chrX:38664471 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_5095 0 0 1 0 0 cytosol 0.438723695169717 0.438718512044887 0.4598584 0 hPsi_site_10512 iPseU_CNN:0.4598584;iRNA_PseU:0 10513 chr10 13652182 13652182 1 + A C UCEC 13652181 + 13652161 13652201 41 AAACACCACAATTGAAGAGTTAGAGGTAATCTCTACACCAA AAACACCACAATTGAAGAGTTCGAGGTAATCTCTACACCAA < 41bp 0.853770181459106 0.523410738771384 0.76678437 0.62310565 prediction 0.660718885375444 Functional Loss - PRPF18 ENSG00000165630;ENSG00000239665 CDS Human other chr10:13652181 chr10:13652182 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5096 0 0 0 0 1 Cytosol 0.438633659267255 0.438718266205178 0.28735744 0 hPsi_site_10513 iPseU_CNN:0.28735744;iRNA_PseU:0 10514 chr8 136619262 136619262 1 + A G LUSC 136619261 + 136619241 136619281 41 ATGATTCCTATGATAACAGCTATAGCACCCCAGCCCAAAGG ATGATTCCTATGATAACAGCTGTAGCACCCCAGCCCAAAGG < 41bp 0.83034053936544 0.426842241244266 0.23821518 0.28610754 prediction 0.660681078730881 Functional Loss - KHDRBS3 ENSG00000131773 CDS Human protein_coding chr8:136619261 chr8:136619262 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5097 0 0 0 0 2 cytosol 0.438718592999023 0.438718592995142 0 0 hPsi_site_10514 iPseU_CNN:0;iRNA_PseU:0 10515 chr19 1300638 1300638 1 + A G rs113993299 1300637 + 1300617 1300657 41 TGAGTCTGAGCCGGAAGGGGTACGTGGTGGGCGCCCCTCAT TGAGTCTGAGCCGGAAGGGGTGCGTGGTGGGCGCCCCTCAT < 41bp 0.852466260226504 0.522131565334373 0.77682865 0.29801446 prediction 0.660669389784262 Functional Loss - EFNA2 ENSG00000099617 UTR3 Human protein_coding chr19:1300637 chr19:1300638 . . 0 22 hPsi_associated_SNPs_5098 0 0 1 0 0 exosome 0.438718592524263 0.438718592602053 0.5536573 0 hPsi_site_10515 iPseU_CNN:0.5536573;iRNA_PseU:0 10516 chr2 68385558 68385558 1 + A G LIHC 68385557 + 68385537 68385577 41 TTCCAGTCCCAGCTAACAGATACACACCATTGAAAGAAAAC TTCCAGTCCCAGCTAACAGATGCACACCATTGAAAGAAAAC < 41bp 0.830332311806316 0.432857236513319 0.8057426 0.23412493 prediction 0.660664623612631 Functional Loss - PNO1 ENSG00000115946 CDS Human protein_coding chr2:68385557 chr2:68385558 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_5099 0 0 1 0 0 Ribosome 0.438726516384248 0.438724929472874 0.6114852 0 hPsi_site_10516 iPseU_CNN:0.6114852;iRNA_PseU:0 10517 chr13 92003059 92003059 1 + A G LUSC 92003058 + 92003038 92003078 41 TAGATTAGCATCTACTGCCCTAAGTGCTCCTTCTGGCATAA TAGATTAGCATCTACTGCCCTGAGTGCTCCTTCTGGCATAA < 41bp 0.830292444202933 0.489779099109221 0.35424942 0.27311984 prediction 0.660584888405866 Functional Loss - MIR17HG;MIR18A ENSG00000215417 ncRNA_exonic Human processed_transcript chr13:92003058 chr13:92003059 . . 0 22 hPsi_associated_SNPs_5100 0 0 1 0 0 unknown 0.438714924386901 0.436338990030613 0 0 hPsi_site_10517 iPseU_CNN:0;iRNA_PseU:0 10518 chr11 56128168 56128168 1 + A C COAD 56128167 + 56128147 56128187 41 TCCTGCTGGTCTCCCTCACATACCTCTATGGCTTTTCTACA TCCTGCTGGTCTCCCTCACATCCCTCTATGGCTTTTCTACA < 41bp 0.830251267541824 0.490064278456065 0.34892 0.23075554 prediction 0.660502535083647 Functional Loss - OR8J1 ENSG00000172487 CDS Human protein_coding chr11:56128167 chr11:56128168 nonsynonymous SNV 0.102 4 22 hPsi_associated_SNPs_5101 0 0 0 0 0 unknown 0.438684152250906 0.438717986261417 0 0 hPsi_site_10518 iPseU_CNN:0;iRNA_PseU:0 10519 chr1 248569421 248569421 1 + A G LUAD 248569420 + 248569400 248569440 41 TCATCTTATTTGGAAGATATTACCTTATATCGGCACAACTG TCATCTTATTTGGAAGATATTGCCTTATATCGGCACAACTG < 41bp 0.830242789990312 0.457451767879259 0.532346 0.2872361 prediction 0.660485579980625 Functional Loss - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248569420 chr1:248569421 synonymous SNV . 0 22 hPsi_associated_SNPs_5102 0 0 0 0 0 unknown 0.438718147660472 0.438703933859729 0.064692 0 hPsi_site_10519 iPseU_CNN:0.064692;iRNA_PseU:0 10520 chr3 183959961 183959961 1 + A G rs2668195 183959960 + 183959940 183959980 41 ACTGCTTCTTACTCCCTCCCTAGAGCCCTCTTGCCCCCACA ACTGCTTCTTACTCCCTCCCTGGAGCCCTCTTGCCCCCACA < 41bp 0.830231286476484 0.474196713036839 0.65171254 0.4092491 prediction 0.660462572952969 Functional Loss - VWA5B2 ENSG00000145198 UTR3 Human protein_coding chr3:183959960 chr3:183959961 . . 0 22 hPsi_associated_SNPs_5103 0 0 0 1 0 exosome 0.438718577102291 0.438718328997321 0.30342508 0 hPsi_site_10520 iPseU_CNN:0.30342508;iRNA_PseU:0 10521 chr21 34635174 34635174 1 + A C COAD 34635173 + 34635153 34635193 41 TGGATATGGTGGAGGTCATTTACATCAACAGAAAGAAGAAA TGGATATGGTGGAGGTCATTTCCATCAACAGAAAGAAGAAA < 41bp 0.84446083054408 0.514230199460188 0.4415461 0.33375245 prediction 0.660461262167784 Functional Loss - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635173 chr21:34635174 nonsynonymous SNV 0.060 0 22 hPsi_associated_SNPs_5104 0 0 1 0 1 Ribosome 0.43900053395469 0.438777299588371 0 0 hPsi_site_10521 iPseU_CNN:0;iRNA_PseU:0 10522 chr10 89624075 89624075 1 + A G rs369849061 89624074 + 89624054 89624094 41 GCAGCCGCCGCAGCAGCCATTACCCGGCTGCGGTCCAGAGC GCAGCCGCCGCAGCAGCCATTGCCCGGCTGCGGTCCAGAGC < 41bp 0.874904708813464 0.544676197007665 0.69451493 0.33605778 prediction 0.660457023611599 Functional Loss - PTEN ENSG00000171862 UTR5 Human protein_coding chr10:89624074 chr10:89624075 . . 0 22 hPsi_associated_SNPs_5105 1 0 1 0 0 Ribosome 0.438723023134437 0.438782056560211 0.38902986 0 hPsi_site_10522 iPseU_CNN:0.38902986;iRNA_PseU:0 Familial cancer of breast Familial cancer of breast 10523 chr13 25171661 25171661 1 + A G rs534914115 25171660 + 25171640 25171680 41 TAGCTGGATCCGATTAAGTATAGTTTCCCCTTCCCCTTCTG TAGCTGGATCCGATTAAGTATGGTTTCCCCTTCCCCTTCTG < 41bp 0.864703854052299 0.534477342840657 0.77402234 0.6851626 prediction 0.660453022423284 Functional Loss - TPTE2P6 ENSG00000205822;ENSG00000243008 ncRNA_exonic Human other chr13:25171660 chr13:25171661 . . 0 22 hPsi_associated_SNPs_5106 0 0 0 0 0 unknown 0.438718586192411 0.438718598994139 0.17771948 0 hPsi_site_10523 iPseU_CNN:0.17771948;iRNA_PseU:0 10524 chr12 7046376 7046376 1 + A G BLCA 7046375 + 7046355 7046395 41 GAGCCCCGTCCCCGGGGGCCTACAAGACAGCCACCCCACCC GAGCCCCGTCCCCGGGGGCCTGCAAGACAGCCACCCCACCC < 41bp 0.893148064297623 0.562928414253045 0.924127 0.6386323 prediction 0.660439300089156 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7046375 chr12:7046376 nonsynonymous SNV 0.466 2 22 hPsi_associated_SNPs_5107 0 0 0 0 0 Endoplasmic reticulum 0.438724364337477 0.438718695231213 0.5709894 0 hPsi_site_10524 iPseU_CNN:0.5709894;iRNA_PseU:0 10525 chr12 100709398 100709398 1 + A G UCEC 100709397 + 100709377 100709417 41 ATTTGTAAACCCTGACATGGTACCTTTTGTTTTGCCCAATG ATTTGTAAACCCTGACATGGTGCCTTTTGTTTTGCCCAATG < 41bp 0.830152653202772 0.429312407884977 0.32151422 0.17907178 prediction 0.660305306405544 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100709397 chr12:100709398 synonymous SNV . 0 22 hPsi_associated_SNPs_5108 0 0 0 0 0 chromatin 0.438596812880687 0.439020221503471 0 0 hPsi_site_10525 iPseU_CNN:0;iRNA_PseU:0 10526 chrX 27766129 27766129 1 + A G PAAD 27766128 + 27766108 27766148 41 AAAGTGGGACTGTATACAATTACTGTGAATCCCGCCAATAC AAAGTGGGACTGTATACAATTGCTGTGAATCCCGCCAATAC < 41bp 0.885504002718599 0.555355433324733 0.40584272 0.24356544 prediction 0.660297138787732 Functional Loss - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27766128 chrX:27766129 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_5109 0 0 0 0 0 exosome 0.438718027385453 0.438718892333677 0 0 hPsi_site_10526 iPseU_CNN:0;iRNA_PseU:0 10527 chr8 86393230 86393230 1 + A G rs73263450 86393229 + 86393209 86393249 41 TGGCTGGTTGGTGCTTTGTTTATGGTAGTAGTTTTTCTGTA TGGCTGGTTGGTGCTTTGTTTGTGGTAGTAGTTTTTCTGTA < 41bp 0.853135318163072 0.522992170659581 0.24960276 0.32072178 prediction 0.660286295006981 Functional Loss - CA2 ENSG00000104267 UTR3 Human protein_coding chr8:86393229 chr8:86393230 . . 0 22 hPsi_associated_SNPs_5110 1 0 1 0 0 Ribosome 0.437398668747397 0.433352013246151 0 0 hPsi_site_10527 iPseU_CNN:0;iRNA_PseU:0 10528 chr11 118516283 118516283 1 + A G GBM 118516282 + 118516262 118516302 41 GAGGGTGAGCACGCCTATGATACGCTGAGTCTGGAGAGCTC GAGGGTGAGCACGCCTATGATGCGCTGAGTCTGGAGAGCTC < 41bp 0.895221656166255 0.565081966476688 0.69760656 0.34048676 prediction 0.660279379379134 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516282 chr11:118516283 nonsynonymous SNV 0.712 4 22 hPsi_associated_SNPs_5111 0 0 1 0 1 Cytosol 0.436735677952287 0.437123200567403 0.39521312 0 hPsi_site_10528 iPseU_CNN:0.39521312;iRNA_PseU:0 10529 chr7 44741144 44741144 1 + A C HNSC 44741143 + 44741123 44741163 41 CTATTGTTCTGTATTTCAGTTAATTATCTTCACCCCCAAAT CTATTGTTCTGTATTTCAGTTCATTATCTTCACCCCCAAAT < 41bp 0.830135209255162 0.47838880729212 0.24321899 0.18091238 prediction 0.660270418510324 Functional Loss - OGDH ENSG00000105953 CDS Human protein_coding chr7:44741143 chr7:44741144 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_5112 0 0 1 0 2 Nucleus 0.438718718899994 0.438830154054858 0 0 hPsi_site_10529 iPseU_CNN:0;iRNA_PseU:0 10530 chr8 128429082 128429082 1 + A G LUAD 128429081 + 128429061 128429101 41 CCCATTTTGGTACCCCAGGCTATGGGAGCCCTCACTTCACT CCCATTTTGGTACCCCAGGCTGTGGGAGCCCTCACTTCACT < 41bp 0.884982885657503 0.554851525151334 0.332565 0.25889486 prediction 0.660262721012338 Functional Loss - POU5F1B ENSG00000212993 CDS Human protein_coding chr8:128429081 chr8:128429082 nonsynonymous SNV 0.926 2 22 hPsi_associated_SNPs_5113 0 0 0 0 0 exosome 0.438716150435768 0.438740743237231 0 0 hPsi_site_10530 iPseU_CNN:0;iRNA_PseU:0 10531 chr4 190878589 190878589 1 + A G rs561930100 190878588 + 190878568 190878608 41 TTGGCCTCAAATAGCTGCTTTATTAGATGCAATGAAGCAGG TTGGCCTCAAATAGCTGCTTTGTTAGATGCAATGAAGCAGG < 41bp 0.830085714764747 0.425854886153571 0.41278762 0.2934094 prediction 0.660171429529493 Functional Loss - FRG1 ENSG00000109536 CDS Human protein_coding chr4:190878588 chr4:190878589 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_5114 0 0 0 0 2 Cytosol 0.438732593540193 0.438720994680616 0 0 hPsi_site_10531 iPseU_CNN:0;iRNA_PseU:0 10532 chr5 223669 223669 1 + A G rs144599870 223668 + 223648 223688 41 GGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAG GGGAACAAGAGGGCATCTGCTGAAGTTTCAGATTCCGTAAG < 41bp 0.830054793451133 0.419144135695199 0.3899235 0.26319766 prediction 0.660109586902266 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:223668 chr5:223669 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5115 4 0 1 0 2 Nucleus 0.438718593938273 0.438718585415543 0 0 hPsi_site_10532 iPseU_CNN:0;iRNA_PseU:0 10533 chr14 20345147 20345147 1 + A G UCEC 20345146 + 20345126 20345166 41 TCTAAGGCCCTTTCTACTTGTACAGCTCATTTCATTGTTGT TCTAAGGCCCTTTCTACTTGTGCAGCTCATTTCATTGTTGT < 41bp 0.873424257645353 0.543420631158549 0.52707005 0.2089816 prediction 0.660007252973608 Functional Loss - OR4K2 ENSG00000165762 CDS Human protein_coding chr14:20345146 chr14:20345147 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_5116 0 0 0 0 0 unknown 0.438719535796836 0.438750574476377 0.0541400999999999 0 hPsi_site_10533 iPseU_CNN:0.0541400999999999;iRNA_PseU:0 10534 chr10 27577719 27577719 1 + A G rs141601935 27577718 + 27577698 27577738 41 GTGCAGATTTGCCATCAGAATATTGGCAAATTCAGAAGCTG GTGCAGATTTGCCATCAGAATGTTGGCAAATTCAGAAGCTG < 41bp 0.829998088526306 0.486856615275981 0.28980213 0.25291544 prediction 0.659996177052611 Functional Loss - ARMC4P1 ENSG00000238021 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:27577718 chr10:27577719 . . 0 22 hPsi_associated_SNPs_5117 0 0 0 0 0 unknown 0.431842642456046 0.420652463412058 0 0 hPsi_site_10534 iPseU_CNN:0;iRNA_PseU:0 10535 chr6 3085585 3085585 1 + A G LUSC 3085584 + 3085564 3085604 41 GAGTACTGCCCAAGAGAAATTATCAGTCTCATGAAGCTCTG GAGTACTGCCCAAGAGAAATTGTCAGTCTCATGAAGCTCTG < 41bp 0.903416841320378 0.573425669075625 0.33516756 0.29951552 prediction 0.659982344489506 Functional Loss - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3085584 chr6:3085585 nonsynonymous SNV 0.073 1 22 hPsi_associated_SNPs_5118 0 0 0 0 2 Ribosome 0.438743622113914 0.438321055920077 0 0 hPsi_site_10535 iPseU_CNN:0;iRNA_PseU:0 10536 chr17 66042766 66042766 1 + A C rs1802811 66042765 + 66042745 66042785 41 CTACGTTTGGTATTTTGTCTTATTGTTTCTCTACTAAGAAC CTACGTTTGGTATTTTGTCTTCTTGTTTCTCTACTAAGAAC < 41bp 0.829975515765313 0.497450537499976 0.25979078 0.2125903 prediction 0.659951031530626 Functional Loss - KPNA2 ENSG00000182481 UTR3 Human protein_coding chr17:66042765 chr17:66042766 . . 0 22 hPsi_associated_SNPs_5119 0 0 1 6 0 Cytosol 0.438718317989602 0.438716270176634 0 0 hPsi_site_10536 iPseU_CNN:0;iRNA_PseU:0 10537 chr19 17611367 17611367 1 + A G STAD 17611366 + 17611346 17611386 41 CGCTGCGCCGCTTCGATGGCTATGTCAGCGAGAGCGCCACC CGCTGCGCCGCTTCGATGGCTGTGTCAGCGAGAGCGCCACC < 41bp 0.906842158842091 0.576877337051197 0.88557005 0.73761487 prediction 0.659929643581787 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17611366 chr19:17611367 nonsynonymous SNV 0.022 4 22 hPsi_associated_SNPs_5120 0 0 1 0 2 Endoplasmic reticulum 0.439322565202945 0.449993167011868 0.29591036 0 hPsi_site_10537 iPseU_CNN:0.29591036;iRNA_PseU:0 10538 chr12 14976535 14976535 1 + A C SKCM 14976534 + 14976514 14976554 41 CAAGGCTATGGGACCAATCTTAGAGATCCTCCAAAAAGCGA CAAGGCTATGGGACCAATCTTCGAGATCCTCCAAAAAGCGA < 41bp 0.8299578168894 0.490793156851494 0.6315187 0.26827005 prediction 0.6599156337788 Functional Loss - C12orf60 ENSG00000182993 CDS Human protein_coding chr12:14976534 chr12:14976535 nonsynonymous SNV 0.132 3 22 hPsi_associated_SNPs_5121 0 0 0 0 0 exosome 0.438718820017788 0.438718578938226 0.2630374 0 hPsi_site_10538 iPseU_CNN:0.2630374;iRNA_PseU:0 10539 chr1 154224114 154224114 1 + A G LUAD 154224113 + 154224093 154224133 41 GCCAGGCTCCAAGTAGCCTGTATACCAGCACGGCCAGGTAG GCCAGGCTCCAAGTAGCCTGTGTACCAGCACGGCCAGGTAG < 41bp 0.829953992988294 0.414599779939067 0.51427966 0.21854469 prediction 0.659907985976589 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154224113 chr1:154224114 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5122 0 0 1 0 1 Nucleus 0.438718597605686 0.438723389808418 0.0285593200000001 0 hPsi_site_10539 iPseU_CNN:0.0285593200000001;iRNA_PseU:0 10540 chr19 36109909 36109909 1 + A G STAD 36109908 + 36109888 36109928 41 GCAGCTCCTGCTGAGGGAGCTACAGGCCAAACAGCAGCGGA GCAGCTCCTGCTGAGGGAGCTGCAGGCCAAACAGCAGCGGA < 41bp 0.903143833408333 0.573214251945309 0.7257198 0.42115706 prediction 0.659859162926046 Functional Loss - HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36109908 chr19:36109909 synonymous SNV . 0 22 hPsi_associated_SNPs_5123 0 0 1 0 1 chromatin 0.440746862585478 0.438828208975804 0.4514396 0 hPsi_site_10540 iPseU_CNN:0.4514396;iRNA_PseU:0 10541 chr19 3157762 3157762 1 + A G CHOL 3157761 + 3157741 3157781 41 AGCCTCGCATTGTTTGGGACTATCCTGGAACTACCCTGGTT AGCCTCGCATTGTTTGGGACTGTCCTGGAACTACCCTGGTT < 41bp 0.829924129630442 0.408934609625584 0.8524155 0.46557835 prediction 0.659848259260883 Functional Loss - GNA15 ENSG00000060558 CDS Human protein_coding chr19:3157761 chr19:3157762 nonsynonymous SNV 0.038 3 22 hPsi_associated_SNPs_5124 0 0 0 0 1 exosome 0.438718603388091 0.43871859427664 0.704831 0 hPsi_site_10541 iPseU_CNN:0.704831;iRNA_PseU:0 10542 chr15 22382655 22382655 1 + A C LIHC 22382654 + 22382634 22382674 41 GCTCACAGCCCCCCTCTATTTATTTCTGGGCAACTTGGCCT GCTCACAGCCCCCCTCTATTTCTTTCTGGGCAACTTGGCCT < 41bp 0.829881753530159 0.469737786723598 0.6061829 0.59690875 prediction 0.659763507060319 Functional Loss - OR4N4 ENSG00000183706 CDS Human protein_coding chr15:22382654 chr15:22382655 nonsynonymous SNV 0.417 0 22 hPsi_associated_SNPs_5125 0 0 0 0 1 unknown 0.438718593192056 0.43871860578337 0.0185483 0 hPsi_site_10542 iPseU_CNN:0.0185483;iRNA_PseU:0 10543 chr16 8906896 8906896 1 + A G LUAD 8906895 + 8906875 8906915 41 CTGATGGATGGGACAAGAGATACTGTCTGCGACATGTGGAA CTGATGGATGGGACAAGAGATGCTGTCTGCGACATGTGGAA < 41bp 0.902379098744892 0.572506120005129 0.23517776 0.17905721 prediction 0.659745957479526 Functional Loss - PMM2 ENSG00000140650 CDS Human protein_coding chr16:8906895 chr16:8906896 nonsynonymous SNV 0.803 3 22 hPsi_associated_SNPs_5126 0 0 1 1 2 Ribosome 0.43858487881734 0.436615124083162 0 0 hPsi_site_10543 iPseU_CNN:0;iRNA_PseU:0 10544 chr12 97330462 97330462 1 + A G UCEC 97330461 + 97330441 97330481 41 CCTGATGGAGCCACTTTGGCTATTGGATCTTCCCGGGGGAA CCTGATGGAGCCACTTTGGCTGTTGGATCTTCCCGGGGGAA < 41bp 0.829858033804386 0.423614424832649 0.4744586 0.4682038 prediction 0.659716067608772 Functional Loss - NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97330461 chr12:97330462 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_5127 0 0 1 0 1 Nucleus 0.438718592995018 0.438718592969549 0 0 hPsi_site_10544 iPseU_CNN:0;iRNA_PseU:0 10545 chr2 46607406 46607406 1 + A G PCPG 46607405 + 46607385 46607425 41 ACTTGGAGACACTGGCACCCTATATCCCCATGGACGGGGAA ACTTGGAGACACTGGCACCCTGTATCCCCATGGACGGGGAA < 41bp 0.904034251262913 0.57420590882686 0.29711854 0.24149412 prediction 0.659656684872106 Functional Loss - EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607405 chr2:46607406 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5128 0 0 1 0 1 Cytosol 0.438723851158919 0.438518890764885 0 0 hPsi_site_10545 iPseU_CNN:0;iRNA_PseU:0 10546 chr3 49743451 49743451 1 + A G UCEC 49743450 + 49743430 49743470 41 GATGATGTCAATGAATACGCTATGGCTCTGAGGGACACAGA GATGATGTCAATGAATACGCTGTGGCTCTGAGGGACACAGA < 41bp 0.829817489292329 0.408448069674462 0.40853137 0.2997109 prediction 0.659634978584658 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49743450 chr3:49743451 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_5129 0 0 1 0 1 Nucleus 0.438730837632869 0.438716056715664 0 0 hPsi_site_10546 iPseU_CNN:0;iRNA_PseU:0 10547 chr17 72999559 72999559 1 + A G UCEC 72999558 + 72999538 72999578 41 AGATGAAGCAGGCCAAGACCTACCTACTGGGTCCGGACGAC AGATGAAGCAGGCCAAGACCTGCCTACTGGGTCCGGACGAC < 41bp 0.894217232367577 0.564420116973668 0.3304901 0.24408334 prediction 0.659594230787819 Functional Loss - CDR2L ENSG00000109089 CDS Human protein_coding chr17:72999558 chr17:72999559 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_5130 0 0 1 0 0 chromatin 0.438732145199947 0.43871898593219 0 0 hPsi_site_10547 iPseU_CNN:0;iRNA_PseU:0 10548 chr17 30696410 30696410 1 + A G GBM 30696409 + 30696389 30696429 41 CCAGTTGGACCAATTGGAGGTATGATGCCACCACAGCCAGG CCAGTTGGACCAATTGGAGGTGTGATGCCACCACAGCCAGG < 41bp 0.903534838359589 0.573740093936373 0.7523364 0.3423357 prediction 0.659589488846433 Functional Loss - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30696409 chr17:30696410 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5131 0 0 1 0 2 Ribosome 0.438718529528073 0.438718565208905 0.5046728 0 hPsi_site_10548 iPseU_CNN:0.5046728;iRNA_PseU:0 10549 chr7 76610299 76610299 1 + A G rs62473743 76610298 + 76610278 76610318 41 TGGCAGCAGAACTGGCCCTGTATCAGGCCGCTACCGCCACT TGGCAGCAGAACTGGCCCTGTGTCAGGCCGCTACCGCCACT < 41bp 0.874440030738722 0.544650798633043 0.8140135 0.5432844 prediction 0.659578464211359 Functional Loss - DTX2P1-UPK3BP1-PMS2P11 ENSG00000186704;ENSG00000265479 ncRNA_exonic Human other chr7:76610298 chr7:76610299 . . 0 22 hPsi_associated_SNPs_5132 0 0 0 0 0 unknown 0.438718614963798 0.438718785311143 0.5414582 0 hPsi_site_10549 iPseU_CNN:0.5414582;iRNA_PseU:0 10550 chr14 59961870 59961870 1 + A G STAD 59961869 + 59961849 59961889 41 TATTGATGCTTTCTGACTGGTACACGATGCTTTACAACCCA TATTGATGCTTTCTGACTGGTGCACGATGCTTTACAACCCA < 41bp 0.893065078306778 0.563278002221643 0.8652423 0.2970481 prediction 0.659574152170271 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59961869 chr14:59961870 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5133 0 0 1 0 1 Ribosome 0.438702905359252 0.438718592771724 0.7304846 0 hPsi_site_10550 iPseU_CNN:0.7304846;iRNA_PseU:0 10551 chr14 105920555 105920555 1 + A G STAD 105920554 + 105920534 105920574 41 TCTTCTTCTATTCTCTAGTCTACGACCCACAGCAGAAGACC TCTTCTTCTATTCTCTAGTCTGCGACCCACAGCAGAAGACC < 41bp 0.829781899486959 0.412318001097617 0.3664711 0.18806258 prediction 0.659563798973918 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105920554 chr14:105920555 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5134 0 0 1 0 2 Cytosol 0.438724056206917 0.438725042332518 0 0 hPsi_site_10551 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10552 chr18 77806070 77806070 1 + A C rs150406097 77806069 + 77806049 77806089 41 GTGCCCCGGAGTACGAATGCTATGCCCCGGACACAGAGGAG GTGCCCCGGAGTACGAATGCTCTGCCCCGGACACAGAGGAG < 41bp 0.829713578419881 0.489116740236451 0.48467302 0.25032303 prediction 0.659427156839762 Functional Loss - RBFA ENSG00000101546 CDS Human protein_coding chr18:77806069 chr18:77806070 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5135 0 0 1 0 0 Ribosome 0.438715730038051 0.43871640090553 0 0 hPsi_site_10552 iPseU_CNN:0;iRNA_PseU:0 10553 chr12 54379300 54379300 1 + A G LUSC 54379299 + 54379279 54379319 41 GGGGCGACCCCAAAGCCGCCTATCGCCTGGAACAACCTGTT GGGGCGACCCCAAAGCCGCCTGTCGCCTGGAACAACCTGTT < 41bp 0.897213941468296 0.567506401843543 0.37024224 0.23392397 prediction 0.659415079249507 Functional Loss - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54379299 chr12:54379300 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5136 0 0 1 0 0 exosome 0.438726467484192 0.438725834689565 0 0 hPsi_site_10553 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10554 chr13 64321040 64321040 1 + A G LUSC 64321039 + 64321019 64321059 41 GCTCCAGCTATGGCTGTGGCTATGGAACTGGCTACAGCTGT GCTCCAGCTATGGCTGTGGCTGTGGAACTGGCTACAGCTGT < 41bp 0.829696984390324 0.459995270294887 0.21163064 0.20912749 prediction 0.659393968780649 Functional Loss - OR7E156P;LOC102723968 ENSG00000226974 CDS Human other chr13:64321039 chr13:64321040 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_5137 0 0 0 1 0 unknown 0.438718549969924 0.4387187498082 0 0 hPsi_site_10554 iPseU_CNN:0;iRNA_PseU:0 10555 chr20 57428804 57428804 1 + A C rs138731520 57428803 + 57428783 57428823 41 AGCCCTCCACCAGAAGAAGCTATGCCCTTTGAGTTTGACCA AGCCCTCCACCAGAAGAAGCTCTGCCCTTTGAGTTTGACCA < 41bp 0.8433555874025 0.513659347613053 0.5434514 0.37859118 prediction 0.659392479578894 Functional Loss - GNAS ENSG00000087460 CDS Human protein_coding chr20:57428803 chr20:57428804 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_5138 0 0 0 0 0 Cytosol 0.438718592981598 0.438718646692076 0.0869028000000001 0 hPsi_site_10555 iPseU_CNN:0.0869028000000001;iRNA_PseU:0 10556 chr5 180377378 180377378 1 + A G rs148879045 180377377 + 180377357 180377397 41 TATTGAGGCCCTACATTGAGTATCCGTCCTATAATGAGCAA TATTGAGGCCCTACATTGAGTGTCCGTCCTATAATGAGCAA < 41bp 0.883705435323384 0.554009852657999 0.35035348 0.26404053 prediction 0.659391165330769 Functional Loss - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180377377 chr5:180377378 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_5139 0 0 0 1 0 chromatin 0.438718592948068 0.438718592995049 0 0 hPsi_site_10556 iPseU_CNN:0;iRNA_PseU:0 10557 chr19 4956762 4956762 1 + A G BRCA 4956761 + 4956741 4956781 41 GTGGAGGAGACGTTCCAGTGTATCTGCTGTCAGGAGCTGGT GTGGAGGAGACGTTCCAGTGTGTCTGCTGTCAGGAGCTGGT < 41bp 0.829695022315846 0.428169983161148 0.24241409 0.18195066 prediction 0.659390044631693 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4956761 chr19:4956762 . 1.000 1 22 hPsi_associated_SNPs_5140 0 0 0 0 2 chromatin 0.438718618946484 0.438715830143523 0 0 hPsi_site_10557 iPseU_CNN:0;iRNA_PseU:0 10558 chr1 152286111 152286111 1 + A G COAD 152286110 + 152286090 152286130 41 GTCACTGGCCTGACTACCGCTAGACCCCCGGTGTCCACGAT GTCACTGGCCTGACTACCGCTGGACCCCCGGTGTCCACGAT < 41bp 0.829684604166375 0.445110842201667 0.63751113 0.32414973 prediction 0.659369208332749 Functional Loss - FLG ENSG00000143631 CDS Human protein_coding chr1:152286110 chr1:152286111 synonymous SNV . 0 22 hPsi_associated_SNPs_5141 0 0 0 0 0 exosome 0.438718593005331 0.438716546485355 0.27502226 0 hPsi_site_10558 iPseU_CNN:0.27502226;iRNA_PseU:0 10559 chr3 52021404 52021404 1 + A G UCEC 52021403 + 52021383 52021423 41 CTAGAGGGTGGCGTGGCCTATAACGTGATACCTGCCACCAT CTAGAGGGTGGCGTGGCCTATGACGTGATACCTGCCACCAT < 41bp 0.82967945779155 0.414959930151905 0.32966715 0.2400763 prediction 0.6593589155831 Functional Loss - ABHD14A-ACY1;ACY1 ENSG00000114786;ENSG00000243989 CDS Human other chr3:52021403 chr3:52021404 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5142 0 0 1 0 2 unknown 0.438718590013132 0.438584769340114 0 0 hPsi_site_10559 iPseU_CNN:0;iRNA_PseU:0 10560 chr19 20044072 20044072 1 + A G LUSC 20044071 + 20044051 20044091 41 AAAAAGTGATACTGAGAAGATATGAAAAACGTGGACATGGA AAAAAGTGATACTGAGAAGATGTGAAAAACGTGGACATGGA < 41bp 0.829673151879588 0.449023003194218 0.26598656 0.252149 prediction 0.659346303759176 Functional Loss - ZNF93 ENSG00000184635 CDS Human protein_coding chr19:20044071 chr19:20044072 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_5143 0 0 1 0 1 Cytosol 0.43809748086791 0.438721403730649 0 0 hPsi_site_10560 iPseU_CNN:0;iRNA_PseU:0 10561 chr1 12921277 12921277 1 + A G rs3204826 12921276 + 12921256 12921296 41 CTCTCTCGAGACCCTCGTGTTAGAGGGCTGTCAGATCCACT CTCTCTCGAGACCCTCGTGTTGGAGGGCTGTCAGATCCACT < 41bp 0.829667033550392 0.42422270902628 0.4997936 0.22060126 prediction 0.659334067100785 Functional Loss - PRAMEF2 ENSG00000120952 CDS Human protein_coding chr1:12921276 chr1:12921277 synonymous SNV . 0 22 hPsi_associated_SNPs_5144 0 0 0 0 0 unknown 0.438726135692497 0.438718761765128 0 0 hPsi_site_10561 iPseU_CNN:0;iRNA_PseU:0 10562 chr22 38274003 38274003 1 + A G CESC 38274002 + 38273982 38274022 41 TCCGCAGCTTCCTGAAGCTCTACACCACCATGCCTGTGGCC TCCGCAGCTTCCTGAAGCTCTGCACCACCATGCCTGTGGCC < 41bp 0.907307947115588 0.577667455691121 0.79042274 0.34242886 prediction 0.659280982848934 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38274002 chr22:38274003 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5145 0 0 1 0 0 Cytosol 0.43871859389433 0.43871859191614 0.58084548 0 hPsi_site_10562 iPseU_CNN:0.58084548;iRNA_PseU:0 10563 chr5 180582009 180582009 1 + A G LUAD 180582008 + 180581988 180582028 41 TTAGGCATCTTCTCCCACAGTACTGCTGACCTTGTCCTCTT TTAGGCATCTTCTCCCACAGTGCTGCTGACCTTGTCCTCTT < 41bp 0.878532041440783 0.548896885292491 0.39038694 0.24527532 prediction 0.659270312296584 Functional Loss - OR2V2 ENSG00000182613 CDS Human protein_coding chr5:180582008 chr5:180582009 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5146 0 0 0 0 0 unknown 0.438718590632986 0.438718592991338 0 0 hPsi_site_10563 iPseU_CNN:0;iRNA_PseU:0 10564 chr16 27459937 27459937 1 + A G LUAD 27459936 + 27459916 27459956 41 TGCCCTCCACCCTGGAGGTGTACAGCTGCCACCCACCACGG TGCCCTCCACCCTGGAGGTGTGCAGCTGCCACCCACCACGG < 41bp 0.829567950331657 0.421029440706577 0.6403193 0.360411 prediction 0.659135900663313 Functional Loss - IL21R ENSG00000103522 CDS Human protein_coding chr16:27459936 chr16:27459937 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5147 0 0 0 0 1 nucleus 0.438718593268005 0.438718592995108 0.2806386 0 hPsi_site_10564 iPseU_CNN:0.2806386;iRNA_PseU:0 10565 chr9 2033021 2033021 1 + A G BLCA 2033020 + 2033000 2033040 41 GGATCCATGAAGGGCACTGGTATGCGACCACCTCACCCAGG GGATCCATGAAGGGCACTGGTGTGCGACCACCTCACCCAGG < 41bp 0.829549647093932 0.412909581044913 0.7335215 0.34796438 prediction 0.659099294187864 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2033020 chr9:2033021 nonsynonymous SNV 0.954 2 22 hPsi_associated_SNPs_5148 0 0 1 0 2 Nucleus 0.43866805024068 0.438652579573414 0.467043 0 hPsi_site_10565 iPseU_CNN:0.467043;iRNA_PseU:0 10566 chr11 61197631 61197631 1 + A G UCEC 61197630 + 61197610 61197650 41 GTGGGGAAAATGGCGGTGTCTACAGTGTTCTCGACTTCGTC GTGGGGAAAATGGCGGTGTCTGCAGTGTTCTCGACTTCGTC < 41bp 0.879359412955329 0.549815828628404 0.40323782 0.28169048 prediction 0.65908716865385 Functional Loss - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61197630 chr11:61197631 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5149 1 0 1 0 1 chromatin 0.438718461372772 0.438701319914969 0 0 hPsi_site_10566 iPseU_CNN:0;iRNA_PseU:0 Diamond-Blackfan anemia Diamond-Blackfan anemia 10567 chr10 127524753 127524753 1 + A G STAD 127524752 + 127524732 127524772 41 CAAATGGTCTTTTGATGACGTACCAATGACGCCCTTGCGAA CAAATGGTCTTTTGATGACGTGCCAATGACGCCCTTGCGAA < 41bp 0.829506616236928 0.439476293212708 0.5366023 0.18427283 prediction 0.659013232473856 Functional Loss - BCCIP ENSG00000107949 CDS Human protein_coding chr10:127524752 chr10:127524753 synonymous SNV . 0 22 hPsi_associated_SNPs_5150 0 0 1 0 1 Ribosome 0.438189647696711 0.43827664797894 0.0732046 0 hPsi_site_10567 iPseU_CNN:0.0732046;iRNA_PseU:0 10568 chr6 96971092 96971092 1 + A G HNSC 96971091 + 96971071 96971111 41 AAACAGCTAGAAGTAGTTCATACACTCGATGGAAAGGAATA AAACAGCTAGAAGTAGTTCATGCACTCGATGGAAAGGAATA < 41bp 0.829477699835359 0.449466088941277 0.3592276 0.24478701 prediction 0.658955399670719 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96971091 chr6:96971092 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5151 0 0 1 1 2 Endoplasmic reticulum 0.438290173299994 0.437935651206573 0 0 hPsi_site_10568 iPseU_CNN:0;iRNA_PseU:0 10569 chr12 52702656 52702656 1 + A G rs1137014 52702655 + 52702635 52702675 41 CTTCTGTTTTTTTTGCTGTATACATTGGTCTTGCCTGAGCT CTTCTGTTTTTTTTGCTGTATGCATTGGTCTTGCCTGAGCT < 41bp 0.829423097614018 0.487724404360613 0.33236736 0.33243787 prediction 0.658846195228036 Functional Loss - KRT86 ENSG00000170442 UTR3 Human protein_coding chr12:52702655 chr12:52702656 . . 0 22 hPsi_associated_SNPs_5152 0 0 0 1 0 nucleus 0.438719204534582 0.438690659662595 0 0 hPsi_site_10569 iPseU_CNN:0;iRNA_PseU:0 10570 chr16 20801957 20801957 1 + A G GBM 20801956 + 20801936 20801976 41 CCTCCTGGACAAGAAGGAGATATTGGCATTCAAGTTCTACC CCTCCTGGACAAGAAGGAGATGTTGGCATTCAAGTTCTACC < 41bp 0.829404618504426 0.415457340826317 0.33085442 0.26573628 prediction 0.658809237008853 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20801956 chr16:20801957 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5153 0 0 1 0 2 Endoplasmic reticulum 0.438720383476939 0.438721564146833 0 0 hPsi_site_10570 iPseU_CNN:0;iRNA_PseU:0 10571 chr1 151131319 151131319 1 + A G COAD 151131318 + 151131298 151131338 41 TCTACCGTGTGTCCAAGGAGTACACGCACAGCCGGCCCCAG TCTACCGTGTGTCCAAGGAGTGCACGCACAGCCGGCCCCAG < 41bp 0.894878468060603 0.56547624143369 0.54829806 0.27633005 prediction 0.658804453253828 Functional Loss - TNFAIP8L2 ENSG00000163154 CDS Human protein_coding chr1:151131318 chr1:151131319 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5154 0 0 0 0 0 Cytosol 0.438687798354258 0.438694371221804 0.0965961200000001 0 hPsi_site_10571 iPseU_CNN:0.0965961200000001;iRNA_PseU:0 10572 chr14 23346491 23346491 1 + A G LGG 23346490 + 23346470 23346510 41 AGCACGTCTCCAGCCCCCACTACTGTCCCTGAAGCCCCAGG AGCACGTCTCCAGCCCCCACTGCTGTCCCTGAAGCCCCAGG < 41bp 0.829394943477922 0.429923666859388 0.32866508 0.30711693 prediction 0.658789886955844 Functional Loss - LRP10 ENSG00000197324 CDS Human protein_coding chr14:23346490 chr14:23346491 nonsynonymous SNV 0.059 1 22 hPsi_associated_SNPs_5155 0 0 1 0 0 Ribosome 0.438718591389804 0.438718592037866 0 0 hPsi_site_10572 iPseU_CNN:0;iRNA_PseU:0 10573 chr17 38990930 38990930 1 + A C UCEC 38990929 + 38990909 38990949 41 GGCCTGCTCCCTTCCTCAAGTATTCTTAAAGCCATGGATTT GGCCTGCTCCCTTCCTCAAGTCTTCTTAAAGCCATGGATTT < 41bp 0.844026862619113 0.514661150003779 0.2579099 0.20899418 prediction 0.658731425230667 Functional Loss - TMEM99 ENSG00000167920 CDS Human protein_coding chr17:38990929 chr17:38990930 synonymous SNV . 0 22 hPsi_associated_SNPs_5156 0 0 1 0 0 Ribosome 0.438717278785823 0.438718581525421 0 0 hPsi_site_10573 iPseU_CNN:0;iRNA_PseU:0 10574 chr6 36562110 36562110 1 + A C rs185113042 36562109 + 36562089 36562129 41 CATGTGATTCCAGTATGGCGTATAAATAAAGGCGAGGAGAA CATGTGATTCCAGTATGGCGTCTAAATAAAGGCGAGGAGAA < 41bp 0.832747003770694 0.503381665479315 0.68359786 0.40622872 prediction 0.658730676582757 Functional Loss - SRSF3 ENSG00000112081 upstream Human protein_coding chr6:36562109 chr6:36562110 . . 0 22 hPsi_associated_SNPs_5157 0 0 0 0 0 Ribosome 0.438719161986798 0.438718612453212 0.36719572 0 hPsi_site_10574 iPseU_CNN:0.36719572;iRNA_PseU:0 10575 chr8 42220141 42220141 1 + A G GBM 42220140 + 42220120 42220160 41 GATTCTACAGCCAAAACTGTTACATCAGGTTGTGGAGCAGT GATTCTACAGCCAAAACTGTTGCATCAGGTTGTGGAGCAGT < 41bp 0.829360652403424 0.430509577086969 0.20469663 0.17154849 prediction 0.658721304806848 Functional Loss - POLB ENSG00000070501 CDS Human protein_coding chr8:42220140 chr8:42220141 synonymous SNV . 0 22 hPsi_associated_SNPs_5158 0 0 1 0 2 Cytosol 0.437672582561519 0.422592941156271 0 0 hPsi_site_10575 iPseU_CNN:0;iRNA_PseU:0 10576 chr1 153651704 153651704 1 + A G rs375325568 153651703 + 153651683 153651723 41 CAACCTGACGGTAGCCGTGGTACTGCCGCTGGCCAATACCT CAACCTGACGGTAGCCGTGGTGCTGCCGCTGGCCAATACCT < 41bp 0.829359623009418 0.440917044377872 0.9177406 0.49203667 prediction 0.658719246018836 Functional Loss - NPR1 ENSG00000169418 CDS Human protein_coding chr1:153651703 chr1:153651704 synonymous SNV . 0 22 hPsi_associated_SNPs_5159 0 0 0 0 0 Cytosol 0.438726239285415 0.438712495799089 0.8354812 0 hPsi_site_10576 iPseU_CNN:0.8354812;iRNA_PseU:0 10577 chr6 53660155 53660155 1 + A G LUSC 53660154 + 53660134 53660174 41 TCCCCGAGGAGATCTACCGCTATGCCCGGAGCCTGGAGGAG TCCCCGAGGAGATCTACCGCTGTGCCCGGAGCCTGGAGGAG < 41bp 0.887672877230352 0.558336176367122 0.434164 0.23154289 prediction 0.65867340172646 Functional Loss - LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53660154 chr6:53660155 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_5160 0 0 1 0 1 Ribosome 0.438719982341961 0.439177236718499 0 0 hPsi_site_10577 iPseU_CNN:0;iRNA_PseU:0 10578 chr12 121666893 121666893 1 + A G LAML 121666892 + 121666872 121666912 41 AGCACAACGTATCTCCTGGCTACAATTTCAGGTGGGCGTGA AGCACAACGTATCTCCTGGCTGCAATTTCAGGTGGGCGTGA < 41bp 0.829335359307852 0.445945375883584 0.6932743 0.38403887 prediction 0.658670718615705 Functional Loss - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121666892 chr12:121666893 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5161 0 0 1 1 1 Endoplasmic reticulum 0.43871727940389 0.438716438602522 0.3865486 0 hPsi_site_10578 iPseU_CNN:0.3865486;iRNA_PseU:0 10579 chr11 45832489 45832489 1 + A G BLCA 45832488 + 45832468 45832508 41 GCATCTGGCGCCTGACTTTCTACAACAACGTCAACGCCTGC GCATCTGGCGCCTGACTTTCTGCAACAACGTCAACGCCTGC < 41bp 0.898025108397735 0.568717499306043 0.660405 0.30287492 prediction 0.658615218183385 Functional Loss - SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45832488 chr11:45832489 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_5162 0 0 1 0 0 Endoplasmic reticulum 0.438802132008663 0.438758505294486 0.32081 0 hPsi_site_10579 iPseU_CNN:0.32081;iRNA_PseU:0 10580 chr18 71825719 71825719 1 + A C rs8148 71825718 + 71825698 71825738 41 CGATCCCAAGATGATTAAAATAGGGTTTCTGATGGATGTTG CGATCCCAAGATGATTAAAATCGGGTTTCTGATGGATGTTG < 41bp 0.829305090265846 0.498279525433817 0.38112402 0.27237016 prediction 0.658610180531693 Functional Loss - TIMM21 ENSG00000075336 UTR3 Human protein_coding chr18:71825718 chr18:71825719 . . 0 22 hPsi_associated_SNPs_5163 0 0 1 0 0 Endoplasmic reticulum 0.438718593047231 0.438718584582921 0 0 hPsi_site_10580 iPseU_CNN:0;iRNA_PseU:0 10581 chr3 50095901 50095901 1 + A G BRCA 50095900 + 50095880 50095920 41 TAGTGGAAGTGCTGGAGCCCTATGTCCGCCTTACTACTGCC TAGTGGAAGTGCTGGAGCCCTGTGTCCGCCTTACTACTGCC < 41bp 0.900162351961266 0.570871697195542 0.20500451 0.14848658 prediction 0.658581309531448 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50095900 chr3:50095901 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_5164 0 0 1 0 2 Nucleus 0.4387185929951 0.438718592992188 0 0 hPsi_site_10581 iPseU_CNN:0;iRNA_PseU:0 Caudal dysgenesis syndrome Caudal dysgenesis syndrome 10582 chr9 107332101 107332101 1 + A G HNSC 107332100 + 107332080 107332120 41 TGTTAGTAATTTCCATCTCTTACATATTTATTGTTGCCACT TGTTAGTAATTTCCATCTCTTGCATATTTATTGTTGCCACT < 41bp 0.829231255525971 0.457854425927078 0.19324511 0.132653 prediction 0.658462511051942 Functional Loss - OR13C8 ENSG00000186943 CDS Human protein_coding chr9:107332100 chr9:107332101 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_5165 0 0 0 0 0 unknown 0.438717566361893 0.438463272359901 0 0 hPsi_site_10582 iPseU_CNN:0;iRNA_PseU:0 Caudal dysgenesis syndrome Caudal dysgenesis syndrome 10583 chr12 6347222 6347222 1 + A G rs150049311 6347221 + 6347201 6347241 41 GGGTTTGGTTTGCTTTGGTTTATATTTTTTCAGTTGTTTGT GGGTTTGGTTTGCTTTGGTTTGTATTTTTTCAGTTGTTTGT < 41bp 0.866849657395438 0.537633496698298 0.30978894 0.24259579 prediction 0.658432321394281 Functional Loss - CD9 ENSG00000010278 UTR3 Human protein_coding chr12:6347221 chr12:6347222 . . 0 22 hPsi_associated_SNPs_5166 0 0 1 0 0 Ribosome 0.438718592632481 0.438718592994515 0 0 hPsi_site_10583 iPseU_CNN:0;iRNA_PseU:0 10584 chr1 248367022 248367022 1 + A G LUSC 248367021 + 248367001 248367041 41 TTGCAATCATCATTGCTTCCTATGCTCGAGTTATCCTGGCT TTGCAATCATCATTGCTTCCTGTGCTCGAGTTATCCTGGCT < 41bp 0.82918764384374 0.454837122028768 0.31182122 0.20373255 prediction 0.65837528768748 Functional Loss - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248367021 chr1:248367022 nonsynonymous SNV 0.017 1 22 hPsi_associated_SNPs_5167 0 0 0 0 0 exosome 0.4387186908607 0.438726890837906 0 0 hPsi_site_10584 iPseU_CNN:0;iRNA_PseU:0 10585 chr2 71886113 71886113 1 + A G OV 71886112 + 71886092 71886132 41 CCCCAGGAGTGCTTGGTCCGTATCTACATTGTCCGAGCATT CCCCAGGAGTGCTTGGTCCGTGTCTACATTGTCCGAGCATT < 41bp 0.829142811321035 0.475043308056043 0.6935258 0.37518716 prediction 0.658285622642069 Functional Loss - DYSF ENSG00000135636 CDS Human protein_coding chr2:71886112 chr2:71886113 nonsynonymous SNV 0.951 0 22 hPsi_associated_SNPs_5168 0 0 0 0 1 Nucleus 0.438445825812596 0.438708567376166 0.3870516 0 hPsi_site_10585 iPseU_CNN:0.3870516;iRNA_PseU:0 10586 chr10 112840171 112840171 1 + A G rs13306146 112840170 + 112840150 112840190 41 CTGACTATGGGGAAATCTTTTAGCTGCTGTTTTTAGACTCC CTGACTATGGGGAAATCTTTTGGCTGCTGTTTTTAGACTCC < 41bp 0.856379543286973 0.527240155220675 0.63058954 0.38664442 prediction 0.658278776132596 Functional Loss - ADRA2A ENSG00000150594 UTR3 Human protein_coding chr10:112840170 chr10:112840171 . . 0 22 hPsi_associated_SNPs_5169 0 0 1 2 0 exosome 0.438719603506073 0.438718599396001 0.26117908 0 hPsi_site_10586 iPseU_CNN:0.26117908;iRNA_PseU:0 10587 chr6 96053653 96053653 1 + A G UCEC 96053652 + 96053632 96053672 41 ATCATCCGGCCTTTTACAGGTACAAGACGAAGACTGGCAAT ATCATCCGGCCTTTTACAGGTGCAAGACGAAGACTGGCAAT < 41bp 0.829109913080065 0.445264116180004 0.6871594 0.38457644 prediction 0.658219826160131 Functional Loss - MANEA ENSG00000172469 CDS Human protein_coding chr6:96053652 chr6:96053653 nonsynonymous SNV 0.845 5 22 hPsi_associated_SNPs_5170 0 0 1 0 1 Ribosome 0.43778946722102 0.438449586711804 0.3743188 0 hPsi_site_10587 iPseU_CNN:0.3743188;iRNA_PseU:0 10588 chr5 112227802 112227802 1 + A G UCEC 112227801 + 112227781 112227821 41 GAAAATGATTTAGAAAATAGTACCACATGGCAAAACCCAGA GAAAATGATTTAGAAAATAGTGCCACATGGCAAAACCCAGA < 41bp 0.829085552154031 0.437609566742236 0.6251379 0.2705359 prediction 0.658171104308062 Functional Loss - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112227801 chr5:112227802 nonsynonymous SNV 0.433 0 22 hPsi_associated_SNPs_5171 0 0 0 0 0 Ribosome 0.438538565862546 0.427632205074279 0.2502758 0 hPsi_site_10588 iPseU_CNN:0.2502758;iRNA_PseU:0 10589 chr19 4792785 4792785 1 + A G UCEC 4792784 + 4792764 4792804 41 GCCTTGGAATTGCTGGGAGCTACGTATGTGGATAAGAAACG GCCTTGGAATTGCTGGGAGCTGCGTATGTGGATAAGAAACG < 41bp 0.897103237411249 0.568020788805157 0.34120375 0.22578254 prediction 0.658164897212184 Functional Loss - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4792784 chr19:4792785 nonsynonymous SNV 0.954 3 22 hPsi_associated_SNPs_5172 0 0 1 0 0 Ribosome 0.439732218098354 0.440294006451435 0 0 hPsi_site_10589 iPseU_CNN:0;iRNA_PseU:0 Phosphoglycerate dehydrogenase deficiency Phosphoglycerate dehydrogenase deficiency 10590 chr21 46066926 46066926 1 + A G rs587598057 46066925 + 46066905 46066945 41 CTTGCTGCACCTCCTCCTCCTACCAGCAGGCCTGCTGCGTG CTTGCTGCACCTCCTCCTCCTGCCAGCAGGCCTGCTGCGTG < 41bp 0.829080706095345 0.436102591099489 0.33976355 0.18951297 prediction 0.658161412190691 Functional Loss - KRTAP10-11 ENSG00000243489 CDS Human protein_coding chr21:46066925 chr21:46066926 nonsynonymous SNV 0.027 0 22 hPsi_associated_SNPs_5173 0 0 0 0 0 unknown 0.438628472970011 0.438638652401642 0 0 hPsi_site_10590 iPseU_CNN:0;iRNA_PseU:0 10591 chr8 15519698 15519698 1 + A G COAD 15519697 + 15519677 15519717 41 AGACCACCCAACTACTCTGGTACCATTGCTTTGGCCCTGTT AGACCACCCAACTACTCTGGTGCCATTGCTTTGGCCCTGTT < 41bp 0.829063837871159 0.418097336146411 0.42288202 0.2478114 prediction 0.658127675742318 Functional Loss - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519697 chr8:15519698 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_5174 0 0 1 0 1 Endoplasmic reticulum 0.438718592986901 0.438718592959789 0 0 hPsi_site_10591 iPseU_CNN:0;iRNA_PseU:0 10592 chr15 81600995 81600995 1 + A G rs4238526 81600994 + 81600974 81601014 41 CCAGCCTGGAGATGAAATCTTACAGCTGGGTGGCACTGCCA CCAGCCTGGAGATGAAATCTTGCAGCTGGGTGGCACTGCCA < 41bp 0.888915464429023 0.559853832125758 0.28508216 0.19728592 prediction 0.658123264606529 Functional Loss - IL16 ENSG00000172349 CDS Human protein_coding chr15:81600994 chr15:81600995 synonymous SNV . 0 22 hPsi_associated_SNPs_5175 0 0 0 0 1 Nucleus 0.438717002768265 0.438732398392047 0 0 hPsi_site_10592 iPseU_CNN:0;iRNA_PseU:0 10593 chr5 178505944 178505944 1 + A G CESC 178505943 + 178505923 178505963 41 GAATTGGGGAAAAGCTTATTTACAAATACAGCTCTTGTCAC GAATTGGGGAAAAGCTTATTTGCAAATACAGCTCTTGTCAC < 41bp 0.883304139087127 0.554287196765351 0.56701386 0.2832518 prediction 0.658033884643553 Functional Loss - ZNF354C ENSG00000177932 CDS Human protein_coding chr5:178505943 chr5:178505944 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5176 0 0 1 0 0 exosome 0.438718074527723 0.438718328449797 0.13402772 0 hPsi_site_10593 iPseU_CNN:0.13402772;iRNA_PseU:0 10594 chr16 10576038 10576038 1 + A G BLCA 10576037 + 10576017 10576057 41 TTTACTGTCCAATCAAAAGATATTTTTGGACGATATGGACC TTTACTGTCCAATCAAAAGATGTTTTTGGACGATATGGACC < 41bp 0.828996320250803 0.442864064260527 0.31241918 0.24611923 prediction 0.657992640501606 Functional Loss - ATF7IP2 ENSG00000166669 CDS Human protein_coding chr16:10576037 chr16:10576038 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5177 0 0 0 0 0 Nucleus 0.438718661219885 0.438718740679815 0 0 hPsi_site_10594 iPseU_CNN:0;iRNA_PseU:0 10595 chr1 84880393 84880393 1 + A G LUSC 84880392 + 84880372 84880412 41 CAAGATCATGCCAAGTGGTGTATTTCCCAAAAGGGCACCAA CAAGATCATGCCAAGTGGTGTGTTTCCCAAAAGGGCACCAA < 41bp 0.893484072926647 0.564488986799618 0.5962661 0.352954 prediction 0.657990172254058 Functional Loss - DNASE2B ENSG00000137976 CDS Human protein_coding chr1:84880392 chr1:84880393 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_5178 0 0 0 0 0 exosome 0.438719676274596 0.438882101505221 0.1925322 0 hPsi_site_10595 iPseU_CNN:0.1925322;iRNA_PseU:0 10596 chr8 90937358 90937358 1 + A G ACC 90937357 + 90937337 90937377 41 TTCTGTAGACTCAAATCTTTTATCTGATTATACCAGCTTTC TTCTGTAGACTCAAATCTTTTGTCTGATTATACCAGCTTTC < 41bp 0.892759449448728 0.563765507548035 0.4145703 0.37817934 prediction 0.657987883801386 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937357 chr8:90937358 synonymous SNV . 0 22 hPsi_associated_SNPs_5179 0 0 1 0 0 Cytosol 0.446715429955348 0.450465255400693 0 0 hPsi_site_10596 iPseU_CNN:0;iRNA_PseU:0 10597 chr12 21615737 21615737 1 + A G UCEC 21615736 + 21615716 21615756 41 ATGCACACATCCCTTCCTGATATCTATGCTGCCGGTGACAT ATGCACACATCCCTTCCTGATGTCTATGCTGCCGGTGACAT < 41bp 0.82898994889877 0.422361940038047 0.72767806 0.32216525 prediction 0.657979897797541 Functional Loss - PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21615736 chr12:21615737 nonsynonymous SNV 0.174 0 22 hPsi_associated_SNPs_5180 0 0 0 0 2 Cytosol 0.439084791442096 0.44059877976701 0.45535612 0 hPsi_site_10597 iPseU_CNN:0.45535612;iRNA_PseU:0 10598 chr2 71360545 71360545 1 + A G COAD 71360544 + 71360524 71360564 41 GAAAAGTCCATAGTAGATGATAAATTCTTCAAACTCTCTGA GAAAAGTCCATAGTAGATGATGAATTCTTCAAACTCTCTGA < 41bp 0.828959219867911 0.440684968693304 0.41945428 0.22494102 prediction 0.657918439735821 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71360544 chr2:71360545 nonsynonymous SNV 0.291 2 22 hPsi_associated_SNPs_5181 0 0 1 0 0 Cytosol 0.438717761057174 0.438655236995057 0 0 hPsi_site_10598 iPseU_CNN:0;iRNA_PseU:0 10599 chr10 75558964 75558964 1 + A G UCEC 75558963 + 75558943 75558983 41 GGTGGGGAAGCTGGGCGGGGTATGCCTGAGGGTAGAGGGGG GGTGGGGAAGCTGGGCGGGGTGTGCCTGAGGGTAGAGGGGG < 41bp 0.901007855955894 0.572078634267078 0.34066254 0.25408435 prediction 0.657858443377632 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75558963 chr10:75558964 nonsynonymous SNV 0.952 0 22 hPsi_associated_SNPs_5182 0 0 1 0 0 Cytosol 0.438716342690874 0.438718773517052 0 0 hPsi_site_10599 iPseU_CNN:0;iRNA_PseU:0 10600 chr20 34458923 34458923 1 + A G PRAD 34458922 + 34458902 34458942 41 GGAAAACACTGACAAAGACTTATCGAGGAGACGTTCCTCCA GGAAAACACTGACAAAGACTTGTCGAGGAGACGTTCCTCCA < 41bp 0.828915980352823 0.423236452361113 0.63704365 0.24715948 prediction 0.657831960705646 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34458922 chr20:34458923 synonymous SNV . 0 22 hPsi_associated_SNPs_5183 0 0 1 0 1 Nucleus 0.438741743388253 0.438706068518839 0.2740873 0 hPsi_site_10600 iPseU_CNN:0.2740873;iRNA_PseU:0 Juvenile hemochromatosis Juvenile hemochromatosis 10601 chr1 155583002 155583002 1 + A G rs61375216 155583001 + 155582981 155583021 41 CAGTCAGTGGTGCTGAGGGGTATAGACAGAGCATGCCACAC CAGTCAGTGGTGCTGAGGGGTGTAGACAGAGCATGCCACAC < 41bp 0.898905306922746 0.569990076087086 0.7265269 0.5582518 prediction 0.65783046167132 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155583001 chr1:155583002 nonsynonymous SNV 0.900 0 22 hPsi_associated_SNPs_5184 0 0 1 0 1 Ribosome 0.438800959587972 0.4387685623713 0.3365502 0 hPsi_site_10601 iPseU_CNN:0.3365502;iRNA_PseU:0 10602 chr1 154987270 154987270 1 + A G UCEC 154987269 + 154987249 154987289 41 TCCGGACGCAGGGCCTTGAATACCGCACCCACAGGGCTGTG TCCGGACGCAGGGCCTTGAATGCCGCACCCACAGGGCTGTG < 41bp 0.828913366184619 0.417196810427583 0.6354528 0.37182474 prediction 0.657826732369238 Functional Loss - ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154987269 chr1:154987270 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5185 0 0 1 0 0 chromatin 0.438718908634165 0.438718722753143 0.2709056 0 hPsi_site_10602 iPseU_CNN:0.2709056;iRNA_PseU:0 10603 chr2 46707785 46707785 1 + A G UCEC 46707784 + 46707764 46707804 41 TCGAGCTCACGCGGCTCAAGTACCTGCATGAGAAGAACCAG TCGAGCTCACGCGGCTCAAGTGCCTGCATGAGAAGAACCAG < 41bp 0.900271024527593 0.571390149995162 0.44516093 0.17136341 prediction 0.657761749064861 Functional Loss - TMEM247 ENSG00000187600 CDS Human protein_coding chr2:46707784 chr2:46707785 nonsynonymous SNV 0.390 3 22 hPsi_associated_SNPs_5186 0 0 0 0 0 unknown 0.438611925824459 0.438735313341782 0 0 hPsi_site_10603 iPseU_CNN:0;iRNA_PseU:0 10604 chr16 2514148 2514148 1 + A G UCEC 2514147 + 2514127 2514167 41 GGAGCCCCCAGCTGCTTGTCTACTCCAGCACCCAGGAGCTG GGAGCCCCCAGCTGCTTGTCTGCTCCAGCACCCAGGAGCTG < 41bp 0.899418259025178 0.570548117682122 0.7825428 0.36493012 prediction 0.657740282686112 Functional Loss - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2514147 chr16:2514148 nonsynonymous SNV 0.460 4 22 hPsi_associated_SNPs_5187 0 0 1 0 1 Ribosome 0.439434181462348 0.43872971717625 0.5650856 0 hPsi_site_10604 iPseU_CNN:0.5650856;iRNA_PseU:0 10605 chr2 130738170 130738170 1 + A G PAAD 130738169 + 130738149 130738189 41 AAACTAGGGCAAAAGCTGGATACAATGTAAAGCAGCTCTTT AAACTAGGGCAAAAGCTGGATGCAATGTAAAGCAGCTCTTT < 41bp 0.828864654468819 0.43334163718549 0.63662416 0.2806704 prediction 0.657729308937639 Functional Loss - RAB6C ENSG00000222014 CDS Human protein_coding chr2:130738169 chr2:130738170 nonsynonymous SNV 0.373 1 22 hPsi_associated_SNPs_5188 0 0 0 0 0 exosome 0.438675937182177 0.438751752787403 0.27324832 0 hPsi_site_10605 iPseU_CNN:0.27324832;iRNA_PseU:0 10606 chr9 34648148 34648148 1 + A G OV 34648147 + 34648127 34648167 41 GGTGCCATGATGGGCTGTTCTAACCCCCACCCCCACTGCCA GGTGCCATGATGGGCTGTTCTGACCCCCACCCCCACTGCCA < 41bp 0.828857925123179 0.405965216154269 0.7795539 0.25261658 prediction 0.657715850246359 Functional Loss - GALT ENSG00000213930;ENSG00000258728 CDS Human other chr9:34648147 chr9:34648148 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5189 0 0 1 0 2 Cytosol 0.438718593860993 0.438718594022022 0.5591078 0 hPsi_site_10606 iPseU_CNN:0.5591078;iRNA_PseU:0 10607 chr11 63994380 63994380 1 + T G LUSC 63994379 + 63994359 63994399 41 CTCCTGCGCCTGGGCCTTACTTCCTACCGAGACTTCCTGGG CTCCTGCGCCTGGGCCTTACTGCCTACCGAGACTTCCTGGG < 41bp 0.828857822708863 0.492944141105619 0.24896038 0.189212 prediction 0.657715645417725 Functional Loss - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994379 chr11:63994380 nonsynonymous SNV 0.938 1 22 hPsi_associated_SNPs_5190 0 0 1 0 0 Ribosome 0.438718592992671 0.438718592977098 0 0 hPsi_site_10607 iPseU_CNN:0;iRNA_PseU:0 10608 chr4 40356064 40356064 1 + A G STAD 40356063 + 40356043 40356083 41 TTGACCATCATGGTGATGAATATCCACTTCTGTGGGGCCGA TTGACCATCATGGTGATGAATGTCCACTTCTGTGGGGCCGA < 41bp 0.828853892862886 0.442812908428165 0.32136506 0.2569599 prediction 0.657707785725772 Functional Loss - CHRNA9 ENSG00000174343 CDS Human protein_coding chr4:40356063 chr4:40356064 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_5191 0 0 0 0 1 nucleus 0.438718593035397 0.43871859840241 0 0 hPsi_site_10608 iPseU_CNN:0;iRNA_PseU:0 10609 chr3 122990702 122990702 1 + A C rs1137117 122990701 + 122990681 122990721 41 TCTCTCCAACTTTCCTTTTTTAAAATCAGCATGATGTGCCT TCTCTCCAACTTTCCTTTTTTCAAATCAGCATGATGTGCCT < 41bp 0.835576357176732 0.506734761771263 0.3686394 0.61608386 prediction 0.657683190810938 Functional Loss - SEC22A ENSG00000121542 UTR3 Human protein_coding chr3:122990701 chr3:122990702 . . 0 22 hPsi_associated_SNPs_5192 0 0 1 0 0 Ribosome 0.438724777697688 0.438721961102338 0 0 hPsi_site_10609 iPseU_CNN:0;iRNA_PseU:0 10610 chr19 16976286 16976286 1 + A G rs773911 16976285 + 16976265 16976305 41 GGAAAGTGTGCAGAAGAAGCTATCTCGGATGGCGCCGGAAG GGAAAGTGTGCAGAAGAAGCTGTCTCGGATGGCGCCGGAAG < 41bp 0.907790185295173 0.578971483425502 0.5632694 0.34865093 prediction 0.657637403739341 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16976285 chr19:16976286 synonymous SNV . 0 22 hPsi_associated_SNPs_5193 0 0 1 0 1 Cytosol 0.438718372412241 0.438695270293301 0.1265388 0 hPsi_site_10610 iPseU_CNN:0.1265388;iRNA_PseU:0 10611 chr3 184024572 184024572 1 + A G rs562725422 184024571 + 184024551 184024591 41 CTGGGGATTGCCCTTATTGCTATGGGGGAGGAGATTGGTGC CTGGGGATTGCCCTTATTGCTGTGGGGGAGGAGATTGGTGC < 41bp 0.828810167378266 0.409739518027508 0.5938843 0.3834558 prediction 0.657620334756532 Functional Loss - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184024571 chr3:184024572 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5194 0 0 1 0 2 Ribosome 0.438718592995121 0.438718592995267 0.1877686 0 hPsi_site_10611 iPseU_CNN:0.1877686;iRNA_PseU:0 10612 chr4 141458655 141458655 1 + A G COAD 141458654 + 141458634 141458674 41 AAAGTGTGAGGAAAAGGCCATATGATTCTGATAACCTACAG AAAGTGTGAGGAAAAGGCCATGTGATTCTGATAACCTACAG < 41bp 0.82880274801486 0.434993917926879 0.20111293 0.18111998 prediction 0.657605496029719 Functional Loss - ELMOD2 ENSG00000179387 CDS Human protein_coding chr4:141458654 chr4:141458655 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_5195 0 0 1 0 2 chromatin 0.43871422536271 0.438723095559711 0 0 hPsi_site_10612 iPseU_CNN:0;iRNA_PseU:0 10613 chr3 46399101 46399101 1 + A G UCEC 46399100 + 46399080 46399120 41 CCACCTTTTTTGATTATGATTACGGTGCTCCCTGTCATAAA CCACCTTTTTTGATTATGATTGCGGTGCTCCCTGTCATAAA < 41bp 0.828737592248401 0.433479812787842 0.70927423 0.38208047 prediction 0.657475184496803 Functional Loss - CCR2 ENSG00000121807 CDS Human protein_coding chr3:46399100 chr3:46399101 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5196 0 0 0 0 0 exosome 0.438718592995506 0.438718592983587 0.41854846 0 hPsi_site_10613 iPseU_CNN:0.41854846;iRNA_PseU:0 10614 chrX 78216615 78216615 1 + A G UCEC 78216614 + 78216594 78216634 41 GTTGCGTTGGTCGGGATGATTACAGTTGCTGAGCTTGCAGG GTTGCGTTGGTCGGGATGATTGCAGTTGCTGAGCTTGCAGG < 41bp 0.828722027374979 0.426631760310559 0.22890538 0.16520709 prediction 0.657444054749958 Functional Loss - P2RY10 ENSG00000078589 CDS Human protein_coding chrX:78216614 chrX:78216615 nonsynonymous SNV 0.838 0 22 hPsi_associated_SNPs_5197 0 0 0 0 0 exosome 0.438534234049722 0.438957022460959 0 0 hPsi_site_10614 iPseU_CNN:0;iRNA_PseU:0 10615 chr1 43162401 43162401 1 + A G ESCA 43162400 + 43162380 43162420 41 ACCGTAACCATTATAGACGCTATCCACGTCGTAGGGGTCCT ACCGTAACCATTATAGACGCTGTCCACGTCGTAGGGGTCCT < 41bp 0.897485221106848 0.568767740253413 0.65001833 0.18747893 prediction 0.657434961706868 Functional Loss - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43162400 chr1:43162401 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5198 0 0 1 0 0 Cytosol 0.438724893939552 0.438719199903803 0.30003666 0 hPsi_site_10615 iPseU_CNN:0.30003666;iRNA_PseU:0 10616 chr19 36349329 36349329 1 + A C GBM 36349328 + 36349308 36349348 41 AGGGTGGTCCCGGTACTGGATATCAGGGAATGCAGCCAATG AGGGTGGTCCCGGTACTGGATCTCAGGGAATGCAGCCAATG < 41bp 0.82867829832645 0.460822696263267 0.9082301 0.9081819 prediction 0.657356596652901 Functional Loss - KIRREL2 ENSG00000126259 CDS Human protein_coding chr19:36349328 chr19:36349329 synonymous SNV . 0 22 hPsi_associated_SNPs_5199 0 0 0 0 0 exosome 0.438694007037328 0.438718593367143 9.64000000001075e-05 0 hPsi_site_10616 iPseU_CNN:9.64000000001075e-05;iRNA_PseU:0 10617 chr16 74339191 74339191 1 + A G UCEC 74339190 + 74339170 74339210 41 ACTGTGGGTTATTACAGAGATATCAAAGACACGACGGTGGG ACTGTGGGTTATTACAGAGATGTCAAAGACACGACGGTGGG < 41bp 0.892375526266442 0.563708661354869 0.31572416 0.2331444 prediction 0.657333729823148 Functional Loss - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339190 chr16:74339191 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_5200 0 0 1 0 1 Ribosome 0.438254023194761 0.438323924409231 0 0 hPsi_site_10617 iPseU_CNN:0;iRNA_PseU:0 10618 chr3 33184922 33184922 1 + A G rs78409158 33184921 + 33184901 33184941 41 ATTTGAGGACAATGCTTAGTTATAAGTCTCCGAGTTGGAAA ATTTGAGGACAATGCTTAGTTGTAAGTCTCCGAGTTGGAAA < 41bp 0.828637743032326 0.455378921556802 0.49732664 0.3104343 prediction 0.657275486064651 Functional Loss - CRTAP ENSG00000170275 UTR3 Human protein_coding chr3:33184921 chr3:33184922 . . 0 22 hPsi_associated_SNPs_5201 0 0 1 0 0 Endoplasmic reticulum 0.438795617368293 0.438734701673422 0 0 hPsi_site_10618 iPseU_CNN:0;iRNA_PseU:0 Multiple complex diseases 10619 chr17 30632423 30632423 1 + A G BLCA 30632422 + 30632402 30632442 41 TGGGCTCTTCTGGAGGGGTGTATGCTCTCGTCTCTGCCCAT TGGGCTCTTCTGGAGGGGTGTGTGCTCTCGTCTCTGCCCAT < 41bp 0.828633838061736 0.410294691646317 0.7875031 0.5312001 prediction 0.657267676123473 Functional Loss - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30632422 chr17:30632423 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_5202 0 0 0 0 1 cytosol 0.438718085681134 0.438720230720063 0.512606 0 hPsi_site_10619 iPseU_CNN:0.512606;iRNA_PseU:0 10620 chr9 117408101 117408101 1 + A G rs2418315 117408100 + 117408080 117408120 41 TTCAGGGTATGCCCACAATGTACATTTCTCGGCATCTGTGC TTCAGGGTATGCCCACAATGTGCATTTCTCGGCATCTGTGC < 41bp 0.844830211766379 0.516202669800213 0.80218935 0.31327876 prediction 0.657255083932333 Functional Loss - TMEM268 ENSG00000157693 UTR3 Human protein_coding chr9:117408100 chr9:117408101 . . 0 22 hPsi_associated_SNPs_5203 0 0 1 1 0 unknown 0.438718795607728 0.438700173211194 0.6043787 0 hPsi_site_10620 iPseU_CNN:0.6043787;iRNA_PseU:0 10621 chr3 178952007 178952007 1 + A G COAD 178952006 + 178951986 178952026 41 AATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCC AATCTTTTGATGACATTGCATGCATTCGAAAGACCCTAGCC < 41bp 0.828625236300518 0.44666450593954 0.74735546 0.39076978 prediction 0.657250472601036 Functional Loss - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178952006 chr3:178952007 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_5204 1 0 1 0 0 Ribosome 0.438718498259981 0.438719168088228 0.49471092 0 hPsi_site_10621 iPseU_CNN:0.49471092;iRNA_PseU:0 10622 chr1 43812255 43812255 1 + A G rs190983971 43812254 + 43812234 43812274 41 GAGGTGACCACAGCCCCGGGTACTGTTCACAGCTACCTGGG GAGGTGACCACAGCCCCGGGTGCTGTTCACAGCTACCTGGG < 41bp 0.828620952158301 0.415656933673044 0.6719395 0.2517531 prediction 0.657241904316603 Functional Loss - MPL ENSG00000117400 CDS Human protein_coding chr1:43812254 chr1:43812255 nonsynonymous SNV 0.953 1 22 hPsi_associated_SNPs_5205 5 0 0 0 1 Nucleus 0.438718587936443 0.438718592996278 0.343879 0 hPsi_site_10622 iPseU_CNN:0.343879;iRNA_PseU:0 10623 chr14 50074502 50074502 1 + A C rs61754305 50074501 + 50074481 50074521 41 AGTGTAGCCTTGTGTCATTCTACACTCCAGAAGTCACTTCG AGTGTAGCCTTGTGTCATTCTCCACTCCAGAAGTCACTTCG < 41bp 0.828597265052093 0.487503747127611 0.27386913 0.20441091 prediction 0.657194530104186 Functional Loss - LRR1 ENSG00000165501 CDS Human protein_coding chr14:50074501 chr14:50074502 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_5206 0 0 1 5 0 Ribosome 0.438029144566044 0.438719293864187 0 0 hPsi_site_10623 iPseU_CNN:0;iRNA_PseU:0 10624 chr17 34842521 34842521 1 + A C rs4796224 34842520 + 34842500 34842540 41 AGAGGCGCGCGGCGGCGCAGTAAACAGTCTCCTTCCACAAA AGAGGCGCGCGGCGGCGCAGTCAACAGTCTCCTTCCACAAA < 41bp 0.839086418351743 0.51050825047693 0.40207887 0.4186675 prediction 0.657156335749627 Functional Loss - ZNHIT3 ENSG00000108278 UTR5 Human other chr17:34842520 chr17:34842521 . . 0 22 hPsi_associated_SNPs_5207 0 0 1 0 0 Cytosol 0.43871784910426 0.43871208760701 0 0 hPsi_site_10624 iPseU_CNN:0;iRNA_PseU:0 10625 chr2 27308661 27308661 1 + A G ESCA 27308660 + 27308640 27308680 41 CAACCAGGGCGTGGCCCGCGTAGACTCCGGTGGCTACGAGC CAACCAGGGCGTGGCCCGCGTGGACTCCGGTGGCTACGAGC < 41bp 0.828536100856345 0.473979175960114 0.8217012 0.588006 prediction 0.65707220171269 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27308660 chr2:27308661 synonymous SNV . 0 22 hPsi_associated_SNPs_5208 0 0 0 0 0 Cytosol 0.438704792582174 0.435140373246316 0.4673904 0 hPsi_site_10625 iPseU_CNN:0.4673904;iRNA_PseU:0 10626 chrX 133560301 133560301 1 + A G rs17317724 133560300 + 133560280 133560320 41 GGCAACTGGTAATGATAAGCTATGAGCTCCAGTGCTTTTGC GGCAACTGGTAATGATAAGCTGTGAGCTCCAGTGCTTTTGC < 41bp 0.828516242271665 0.440690001569093 0.32928887 0.29529923 prediction 0.65703248454333 Functional Loss - PHF6 ENSG00000156531 UTR3 Human protein_coding chrX:133560300 chrX:133560301 . . 0 22 hPsi_associated_SNPs_5209 0 0 1 3 0 Ribosome 0.478439674020405 0.458139852897533 0 0 hPsi_site_10626 iPseU_CNN:0;iRNA_PseU:0 10627 chr19 38895639 38895639 1 + A C STAD 38895638 + 38895618 38895658 41 GCCACCCCTTGGTGAAGGGGTAGTGGAGGGAGCCGGCATGG GCCACCCCTTGGTGAAGGGGTCGTGGAGGGAGCCGGCATGG < 41bp 0.828468999140517 0.463471875029877 0.6687025 0.17891753 prediction 0.656937998281035 Functional Loss - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38895638 chr19:38895639 synonymous SNV . 0 22 hPsi_associated_SNPs_5210 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592965156 0.337405 0 hPsi_site_10627 iPseU_CNN:0.337405;iRNA_PseU:0 10628 chr10 104573403 104573403 1 + A G rs11191401 104573402 + 104573382 104573422 41 TGGGTCAGAGAGATGTGTTTTAAAAGCCCCCAAGGAAGGAG TGGGTCAGAGAGATGTGTTTTGAAAGCCCCCAAGGAAGGAG < 41bp 0.828455296366673 0.441521302091226 0.45773003 0.30618128 prediction 0.656910592733346 Functional Loss - WBP1L ENSG00000166272 UTR3 Human protein_coding chr10:104573402 chr10:104573403 . . 0 22 hPsi_associated_SNPs_5211 0 0 1 0 0 chromatin 0.438718584210439 0.438718560473785 0 0 hPsi_site_10628 iPseU_CNN:0;iRNA_PseU:0 10629 chrX 30254063 30254063 1 + A G GBM 30254062 + 30254042 30254082 41 ATGCCTCGGGGTCAGAAGAGTACGCTCCATGCACGTGAGAA ATGCCTCGGGGTCAGAAGAGTGCGCTCCATGCACGTGAGAA < 41bp 0.82842613637842 0.433182667826232 0.88161254 0.30207807 prediction 0.65685227275684 Functional Loss - MAGEB3 ENSG00000198798 CDS Human protein_coding chrX:30254062 chrX:30254063 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5212 0 0 0 0 1 unknown 0.423093061378722 0.442861805130182 0.76322508 0 hPsi_site_10629 iPseU_CNN:0.76322508;iRNA_PseU:0 10630 chr3 140401588 140401588 1 + A G UCEC 140401587 + 140401567 140401607 41 AGATGCAGCTGCCCGAGAACTACCTGCACGGGCGTCTCACC AGATGCAGCTGCCCGAGAACTGCCTGCACGGGCGTCTCACC < 41bp 0.828405425414761 0.407116128199161 0.6174358 0.27291808 prediction 0.656810850829523 Functional Loss - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140401587 chr3:140401588 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5213 0 0 0 0 0 exosome 0.438881229875039 0.438323604292407 0.2348716 0 hPsi_site_10630 iPseU_CNN:0.2348716;iRNA_PseU:0 10631 chr9 91949573 91949573 1 + A G UCEC 91949572 + 91949552 91949592 41 AGATCCTAAAAATGTTAGTATACCATCTTCTGAAGCTTTAT AGATCCTAAAAATGTTAGTATGCCATCTTCTGAAGCTTTAT < 41bp 0.828402465636814 0.429037860239049 0.2632892 0.23969105 prediction 0.656804931273628 Functional Loss - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91949572 chr9:91949573 nonsynonymous SNV 0.497 0 22 hPsi_associated_SNPs_5214 0 0 1 0 3 Cytosol 0.438718588576414 0.438716455943644 0 0 hPsi_site_10631 iPseU_CNN:0;iRNA_PseU:0 10632 chr6 30617717 30617717 1 + A G BLCA 30617716 + 30617696 30617736 41 AGGAACATCTGTCTGTCATGTATGAGAGACTGAGACAAGAG AGGAACATCTGTCTGTCATGTGTGAGAGACTGAGACAAGAG < 41bp 0.828358263775921 0.487974281900624 0.79506207 0.39692837 prediction 0.656716527551842 Functional Loss - C6orf136 ENSG00000204564 CDS Human protein_coding chr6:30617716 chr6:30617717 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5215 0 0 1 0 1 Cytosol 0.438011398501333 0.438557473829196 0.59012414 0 hPsi_site_10632 iPseU_CNN:0.59012414;iRNA_PseU:0 10633 chr5 79375894 79375894 1 + A G DLBC 79375893 + 79375873 79375913 41 AGCACAGGCCCCAGGTGGGCTACATCAGGTAGGTAGAGGCC AGCACAGGCCCCAGGTGGGCTGCATCAGGTAGGTAGAGGCC < 41bp 0.828348582133967 0.415986417034933 0.18456355 0.1480341 prediction 0.656697164267935 Functional Loss - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79375893 chr5:79375894 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_5216 0 0 0 0 1 exosome 0.438718652578212 0.438718584964841 0 0 hPsi_site_10633 iPseU_CNN:0;iRNA_PseU:0 10634 chr11 66239874 66239874 1 + A C ESCA 66239873 + 66239853 66239893 41 GTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCAC GTGGTCAGCACAGCATCTCGTCTACACTGTCCCGGAGCCAC < 41bp 0.873157098287352 0.544816365860124 0.4481739 0.27477935 prediction 0.656681464854456 Functional Loss - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66239873 chr11:66239874 nonsynonymous SNV 0.959 4 22 hPsi_associated_SNPs_5217 0 0 0 0 2 Ribosome 0.427833503017719 0.442204442718741 0 0 hPsi_site_10634 iPseU_CNN:0;iRNA_PseU:0 10635 chr8 48888337 48888337 1 + T G READ 48888336 + 48888316 48888356 41 GAAGCATTGAAAAAGCTTATTTTATCTAAGGGCAAAACACC GAAGCATTGAAAAAGCTTATTGTATCTAAGGGCAAAACACC < 41bp 0.828307157237502 0.491325025380574 0.5586666 0.42646417 prediction 0.656614314475004 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48888336 chr8:48888337 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5218 0 0 1 0 2 Cytosol 0.438718589332245 0.438718591501278 0.1173332 0 hPsi_site_10635 iPseU_CNN:0.1173332;iRNA_PseU:0 10636 chr20 60701436 60701436 1 + A G KIRC 60701435 + 60701415 60701455 41 CTTTCCGAGGGATGGCGCCCTACGGCCCGCTGGCGGCCAGC CTTTCCGAGGGATGGCGCCCTGCGGCCCGCTGGCGGCCAGC < 41bp 0.90427597491921 0.575972021311956 0.40387186 0.2595216 prediction 0.656607907214508 Functional Loss - LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701435 chr20:60701436 nonsynonymous SNV 0.880 4 22 hPsi_associated_SNPs_5219 0 0 1 0 2 Ribosome 0.438720639538434 0.43871522247144 0 0 hPsi_site_10636 iPseU_CNN:0;iRNA_PseU:0 10637 chr12 6691834 6691834 1 + A G BLCA 6691833 + 6691813 6691853 41 TCTTACAAGCCACTGGGTAGTAAAAGCATCCTGAGGTGGCA TCTTACAAGCCACTGGGTAGTGAAAGCATCCTGAGGTGGCA < 41bp 0.88292368804067 0.554659617591692 0.287495 0.17290983 prediction 0.656528140897955 Functional Loss - CHD4 ENSG00000111642 CDS Human protein_coding chr12:6691833 chr12:6691834 synonymous SNV . 0 22 hPsi_associated_SNPs_5220 0 0 0 0 1 Nucleus 0.438719556488475 0.43871828557718 0 0 hPsi_site_10637 iPseU_CNN:0;iRNA_PseU:0 10638 chr15 40702833 40702833 1 + A G HNSC 40702832 + 40702812 40702852 41 CCACACCACTCACAGTTCAGTATGGCGGCTCCGGCCTGGGC CCACACCACTCACAGTTCAGTGTGGCGGCTCCGGCCTGGGC < 41bp 0.828243846399816 0.409425780252312 0.66577065 0.30257562 prediction 0.656487692799631 Functional Loss - IVD ENSG00000128928 CDS Human protein_coding chr15:40702832 chr15:40702833 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5221 0 0 1 0 1 Cytosol 0.438718563105136 0.438649470568248 0.3315413 0 hPsi_site_10638 iPseU_CNN:0.3315413;iRNA_PseU:0 10639 chr19 13885340 13885340 1 + A G STAD 13885339 + 13885319 13885359 41 GCGCACAAACCCGCAAAGAGTAAGACGGCAGCGGCAGCCTC GCGCACAAACCCGCAAAGAGTGAGACGGCAGCGGCAGCCTC < 41bp 0.8282323499801 0.423932446014356 0.78222007 0.27238646 prediction 0.6564646999602 Functional Loss - C19orf53 ENSG00000104979 CDS Human protein_coding chr19:13885339 chr19:13885340 nonsynonymous SNV 0.236 1 22 hPsi_associated_SNPs_5222 0 0 1 0 1 Cytosol 0.438726814576957 0.438716852199268 0.56444014 0 hPsi_site_10639 iPseU_CNN:0.56444014;iRNA_PseU:0 10640 chr2 47049361 47049361 1 + A G rs116368980 47049360 + 47049340 47049380 41 CTAAAACGAAGGGCGGAAATTATCTGGGGAATTTCCTTCCC CTAAAACGAAGGGCGGAAATTGTCTGGGGAATTTCCTTCCC < 41bp 0.828222799639464 0.470523749069727 0.6001554 0.46631697 prediction 0.656445599278928 Functional Loss - LINC01118 ENSG00000222005 UTR3 Human lincRNA chr2:47049360 chr2:47049361 . . 0 22 hPsi_associated_SNPs_5223 0 0 0 0 0 unknown 0.438718592993727 0.438718593007395 0.2003108 0 hPsi_site_10640 iPseU_CNN:0.2003108;iRNA_PseU:0 10641 chr10 112269864 112269864 1 + A G LGG 112269863 + 112269843 112269883 41 ACCATCTGCATGGCTTACCTTATGAAGACCAAGCAGTTCCG ACCATCTGCATGGCTTACCTTGTGAAGACCAAGCAGTTCCG < 41bp 0.896148957708649 0.568012133443464 0.63054156 0.36168867 prediction 0.65627364853037 Functional Loss - DUSP5 ENSG00000138166 CDS Human protein_coding chr10:112269863 chr10:112269864 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5224 0 0 1 0 1 Cytosol 0.428998789875918 0.410797201142161 0.26108312 0 hPsi_site_10641 iPseU_CNN:0.26108312;iRNA_PseU:0 10642 chr6 71289211 71289211 1 + A G UCEC 71289210 + 71289190 71289230 41 GTCCCTTAAGAAGCCGAAGTTACCAGAAGGTCGTTTTGATG GTCCCTTAAGAAGCCGAAGTTGCCAGAAGGTCGTTTTGATG < 41bp 0.828124317660847 0.419483668988477 0.34135148 0.2441526 prediction 0.656248635321693 Functional Loss - SDHAF4 ENSG00000154079 CDS Human protein_coding chr6:71289210 chr6:71289211 synonymous SNV . 0 22 hPsi_associated_SNPs_5225 0 0 1 0 2 nucleoplasm 0.438759797232776 0.438679892770834 0 0 hPsi_site_10642 iPseU_CNN:0;iRNA_PseU:0 10643 chr20 37001747 37001747 1 + A C MESO 37001746 + 37001726 37001766 41 TGGAAGCGCTCCTCAACTATTACATCCTTAACACCTTCTAC TGGAAGCGCTCCTCAACTATTCCATCCTTAACACCTTCTAC < 41bp 0.865981507768378 0.537860231682019 0.3060777 0.2908286 prediction 0.656242552172719 Functional Loss - LBP ENSG00000129988 CDS Human protein_coding chr20:37001746 chr20:37001747 nonsynonymous SNV 0.250 0 22 hPsi_associated_SNPs_5226 0 0 0 0 2 exosome 0.43871775568586 0.438718592398594 0 0 hPsi_site_10643 iPseU_CNN:0;iRNA_PseU:0 10644 chr2 177202358 177202358 1 + A G COAD 177202357 + 177202337 177202377 41 GTAGGAGAATTGAACAGCACTATTTTGAAGATCGTGGTAAA GTAGGAGAATTGAACAGCACTGTTTTGAAGATCGTGGTAAA < 41bp 0.828113693401205 0.441594277229992 0.45356315 0.29660103 prediction 0.656227386802411 Functional Loss - MTX2 ENSG00000128654 CDS Human protein_coding chr2:177202357 chr2:177202358 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5227 0 0 1 0 0 Ribosome 0.438716822520826 0.438686866849662 0 0 hPsi_site_10644 iPseU_CNN:0;iRNA_PseU:0 10645 chr10 104660721 104660721 1 + A G rs17881031 104660720 + 104660700 104660740 41 TGGGCATGGTGGTGCACACCTATAGTCTCAGCTACTCGGGA TGGGCATGGTGGTGCACACCTGTAGTCTCAGCTACTCGGGA < 41bp 0.828100044590303 0.464496235342357 0.35365015 0.3224792 prediction 0.656200089180607 Functional Loss - BORCS7-ASMT ENSG00000214435;ENSG00000270316 UTR3 Human other chr10:104660720 chr10:104660721 . . 0 22 hPsi_associated_SNPs_5228 0 0 0 0 0 exosome 0.438571577431343 0.436388916228003 0 0 hPsi_site_10645 iPseU_CNN:0;iRNA_PseU:0 10646 chr16 83999179 83999179 1 + A G LUAD 83999178 + 83999158 83999198 41 ACCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTG ACCAGCTGCCCAAGATGCTGTGCCCCGAGTACCACAAGGTG < 41bp 0.90099279503618 0.572897470976518 0.5457732 0.20051616 prediction 0.656190648119323 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83999178 chr16:83999179 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5229 0 0 0 0 0 chromatin 0.438718600314769 0.438718590038816 0.0915463999999999 0 hPsi_site_10646 iPseU_CNN:0.0915463999999999;iRNA_PseU:0 10647 chr14 70924884 70924884 1 + A G LUSC 70924883 + 70924863 70924903 41 TGAACCATGATTTCTTCATTTACTCTCAAAGCAACATCTCA TGAACCATGATTTCTTCATTTGCTCTCAAAGCAACATCTCA < 41bp 0.828052620597979 0.430383377064913 0.46426466 0.2780549 prediction 0.656105241195958 Functional Loss - ADAM21 ENSG00000139985 CDS Human protein_coding chr14:70924883 chr14:70924884 nonsynonymous SNV 0.940 2 22 hPsi_associated_SNPs_5230 0 0 0 0 0 exosome 0.438718143905549 0.438566921126327 0 0 hPsi_site_10647 iPseU_CNN:0;iRNA_PseU:0 10648 chr7 148952056 148952056 1 + A G rs564156213 148952055 + 148952035 148952075 41 ACAGCCCAACACTTGTTTTTTACATTTTAAGAGTTGTAGAA ACAGCCCAACACTTGTTTTTTGCATTTTAAGAGTTGTAGAA < 41bp 0.863981127019563 0.535936924878135 0.22050625 0.19537333 prediction 0.656088404282857 Functional Loss - ZNF212 ENSG00000170260 UTR3 Human protein_coding chr7:148952055 chr7:148952056 . . 0 22 hPsi_associated_SNPs_5231 0 0 1 0 0 Cytosol 0.437998293028843 0.438350234615684 0 0 hPsi_site_10648 iPseU_CNN:0;iRNA_PseU:0 10649 chr2 95843296 95843296 1 + A G COAD 95843295 + 95843275 95843315 41 GTGGAGTCGTCTGGTCCCCATACAGAGGGACCTCTACAAGG GTGGAGTCGTCTGGTCCCCATGCAGAGGGACCTCTACAAGG < 41bp 0.828029249467726 0.409365764710159 0.46130213 0.41270736 prediction 0.656058498935452 Functional Loss - ZNF2 ENSG00000163067 CDS Human other chr2:95843295 chr2:95843296 nonsynonymous SNV 0.190 0 22 hPsi_associated_SNPs_5232 0 0 1 0 2 chromatin 0.438718591318869 0.438718515760255 0 0 hPsi_site_10649 iPseU_CNN:0;iRNA_PseU:0 10650 chr1 109444525 109444525 1 + A G UCEC 109444524 + 109444504 109444544 41 ACTATGAAAAGGCCATTGATTATCATCTGAAGCACTTAGCA ACTATGAAAAGGCCATTGATTGTCATCTGAAGCACTTAGCA < 41bp 0.889492683733053 0.561474093074784 0.30662248 0.23152113 prediction 0.656037181316537 Functional Loss - GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109444524 chr1:109444525 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_5233 0 0 1 0 1 Endoplasmic reticulum 0.438715954620874 0.438717405895338 0 0 hPsi_site_10650 iPseU_CNN:0;iRNA_PseU:0 10651 chr8 19677936 19677936 1 + A G rs34010574 19677935 + 19677915 19677955 41 GGTCCAGTGTGAAATGTTACTAAAGGTCACGGAACAATGCT GGTCCAGTGTGAAATGTTACTGAAGGTCACGGAACAATGCT < 41bp 0.827989888827222 0.418160519060234 0.33147216 0.18363407 prediction 0.655979777654443 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677935 chr8:19677936 synonymous SNV . 0 22 hPsi_associated_SNPs_5234 0 0 1 0 2 Cytosol 0.438510205638787 0.438860633645317 0 0 hPsi_site_10651 iPseU_CNN:0;iRNA_PseU:0 10652 chr17 7577581 7577581 1 + A G COAD 7577580 + 7577560 7577600 41 AACTGTTACACATGTAGTTGTAGTGGATGGTGGTACAGTCA AACTGTTACACATGTAGTTGTGGTGGATGGTGGTACAGTCA < 41bp 0.873859582541836 0.54587211906279 0.34563756 0.15052256 prediction 0.655974926958093 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577580 chr17:7577581 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5235 15 0 0 0 0 Ribosome 0.43877132511857 0.439918985017003 0 0 hPsi_site_10652 iPseU_CNN:0;iRNA_PseU:0 10653 chr1 173810047 173810047 1 + T G UCS 173810046 + 173810026 173810066 41 TTAGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGT TTAGAAACACAGAGATTGGATGTCTTCAAGATGCACTTAGT < 41bp 0.82797284671402 0.498970088241793 0.24717292 0.2346462 prediction 0.655945693428041 Functional Loss - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173810046 chr1:173810047 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_5236 0 0 1 0 2 chromatin 0.438988571945995 0.439723492572739 0 0 hPsi_site_10653 iPseU_CNN:0;iRNA_PseU:0 10654 chr2 27280284 27280284 1 + A G UCEC 27280283 + 27280263 27280303 41 CGCCGGCTTTCCCCTCCAGATACACTGTGGAACTATTTGAG CGCCGGCTTTCCCCTCCAGATGCACTGTGGAACTATTTGAG < 41bp 0.827944225550315 0.418142655444458 0.2424669 0.19345003 prediction 0.65588845110063 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280283 chr2:27280284 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5237 0 0 1 1 1 Cytosol 0.438718626601945 0.438718593028696 0 0 hPsi_site_10654 iPseU_CNN:0;iRNA_PseU:0 10655 chr4 160274685 160274685 1 + A G STAD 160274684 + 160274664 160274704 41 CGAGGCTTATATGCTACAGCTACAGTAATTTCTTCTCCAAG CGAGGCTTATATGCTACAGCTGCAGTAATTTCTTCTCCAAG < 41bp 0.827913826363863 0.428752809226241 0.32190508 0.3016152 prediction 0.655827652727726 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160274684 chr4:160274685 nonsynonymous SNV 0.661 1 22 hPsi_associated_SNPs_5238 0 0 1 0 1 Cytosol 0.438773666158675 0.438752090478642 0 0 hPsi_site_10655 iPseU_CNN:0;iRNA_PseU:0 10656 chr3 184039304 184039304 1 + A G rs16858632 184039303 + 184039283 184039323 41 CCCGTGAAACTGGGGAGCCATATCGCCTCTCTCCAGAACCC CCCGTGAAACTGGGGAGCCATGTCGCCTCTCTCCAGAACCC < 41bp 0.827910510683525 0.431002935164829 0.4353013 0.25482434 prediction 0.65582102136705 Functional Loss - EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039303 chr3:184039304 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_5239 0 0 1 0 0 Nucleus 0.438602481266925 0.438724190524367 0 0 hPsi_site_10656 iPseU_CNN:0;iRNA_PseU:0 10657 chr8 103572752 103572752 1 + A G UCEC 103572751 + 103572731 103572771 41 CATTTTAGGATCGGTGAATGTATGCGGTTTTGAACCCGATC CATTTTAGGATCGGTGAATGTGTGCGGTTTTGAACCCGATC < 41bp 0.827876117249552 0.427174491778401 0.68193084 0.5416756 prediction 0.655752234499103 Functional Loss - ODF1 ENSG00000155087 CDS Human protein_coding chr8:103572751 chr8:103572752 synonymous SNV . 0 22 hPsi_associated_SNPs_5240 0 0 0 0 1 unknown 0.438691758177324 0.438366940241597 0.28051048 0 hPsi_site_10657 iPseU_CNN:0.28051048;iRNA_PseU:0 10658 chr20 30418922 30418922 1 + A G PRAD 30418921 + 30418901 30418941 41 GATAAGACAGACATGTGGAGTATGGGGGTGATCACCTACAT GATAAGACAGACATGTGGAGTGTGGGGGTGATCACCTACAT < 41bp 0.82787116234739 0.418938283589819 0.37327492 0.23061666 prediction 0.655742324694779 Functional Loss - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30418921 chr20:30418922 nonsynonymous SNV 0.911 0 22 hPsi_associated_SNPs_5241 0 0 1 0 1 exosome 0.43871658371037 0.438730905661304 0 0 hPsi_site_10658 iPseU_CNN:0;iRNA_PseU:0 10659 chr5 92923671 92923671 1 + A G UCEC 92923670 + 92923650 92923690 41 CCCAGCCCAATCCAGGCCAGTACGCACTCACCAACGGGGAC CCCAGCCCAATCCAGGCCAGTGCGCACTCACCAACGGGGAC < 41bp 0.901342758884951 0.573472731452209 0.37649268 0.20880923 prediction 0.655740054865483 Functional Loss - NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923670 chr5:92923671 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5242 0 0 1 0 1 nucleus 0.438716147519102 0.43454807949072 0 0 hPsi_site_10659 iPseU_CNN:0;iRNA_PseU:0 10660 chr21 35254641 35254641 1 + A G UCEC 35254640 + 35254620 35254660 41 CCAAGAGCAACAAGGAGCTGTATGGCTTCCTTTTCAACGAC CCAAGAGCAACAAGGAGCTGTGTGGCTTCCTTTTCAACGAC < 41bp 0.853225364065861 0.525357065694663 0.7483262 0.81665707 prediction 0.655736596742395 Functional Loss - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35254640 chr21:35254641 nonsynonymous SNV 0.976 3 22 hPsi_associated_SNPs_5243 0 0 0 0 1 Nucleus 0.438717310669956 0.438703680808111 0 0 hPsi_site_10660 iPseU_CNN:0;iRNA_PseU:0 10661 chr3 148876511 148876511 1 + A G rs574234110 148876510 + 148876490 148876530 41 TATAAGATGTCTGGTTTGTCTATGGCTGAAGTTCTGGCCCG TATAAGATGTCTGGTTTGTCTGTGGCTGAAGTTCTGGCCCG < 41bp 0.827848608214306 0.416300423200336 0.537047 0.24834704 prediction 0.655697216428612 Functional Loss - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148876510 chr3:148876511 nonsynonymous SNV 0.973 0 22 hPsi_associated_SNPs_5244 0 0 0 0 1 Ribosome 0.438718590085034 0.438718322011849 0.0740940000000001 0 hPsi_site_10661 iPseU_CNN:0.0740940000000001;iRNA_PseU:0 10662 chr17 40715107 40715107 1 + A G COAD 40715106 + 40715086 40715126 41 CGGTGCTGCTATACTCCGATTATGGGATAGGAGAAGTGCCC CGGTGCTGCTATACTCCGATTGTGGGATAGGAGAAGTGCCC < 41bp 0.827832948556056 0.415406763747438 0.5130269 0.5000548 prediction 0.655665897112111 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40715106 chr17:40715107 nonsynonymous SNV 0.234 3 22 hPsi_associated_SNPs_5245 0 0 1 0 0 Ribosome 0.438374356247079 0.438060072298429 0.0259441999999999 0 hPsi_site_10662 iPseU_CNN:0.0259441999999999;iRNA_PseU:0 10663 chr2 160585639 160585639 1 + A G COAD 160585638 + 160585618 160585658 41 AGAGGAAGTAGTTTAAATGATACCTATCACTCAAGAGACTC AGAGGAAGTAGTTTAAATGATGCCTATCACTCAAGAGACTC < 41bp 0.827820904886063 0.440372718590987 0.751841 0.27788305 prediction 0.655641809772126 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160585638 chr2:160585639 nonsynonymous SNV 0.949 0 22 hPsi_associated_SNPs_5246 0 0 1 0 1 Cytosol 0.438648084532604 0.438718419120911 0.503682 0 hPsi_site_10663 iPseU_CNN:0.503682;iRNA_PseU:0 10664 chr11 122666910 122666910 1 + T G UCEC 122666909 + 122666889 122666929 41 GCCCCCAGAAGCGATGCCTTTTTGTGTGTCGGCATGGTGAG GCCCCCAGAAGCGATGCCTTTGTGTGTGTCGGCATGGTGAG < 41bp 0.828479416483912 0.500686796628579 0.3872571 0.3339467 prediction 0.655585239710666 Functional Loss - UBASH3B ENSG00000154127 CDS Human protein_coding chr11:122666909 chr11:122666910 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_5247 0 0 0 0 2 Ribosome 0.438714957184225 0.438774378658654 0 0 hPsi_site_10664 iPseU_CNN:0;iRNA_PseU:0 10665 chr11 10786156 10786156 1 + A G UCEC 10786155 + 10786135 10786175 41 CGGAACACGATGAGCATTACTATAACGCCATTTCCGTTACC CGGAACACGATGAGCATTACTGTAACGCCATTTCCGTTACC < 41bp 0.827789198489882 0.420052929606512 0.87268984 0.35946333 prediction 0.655578396979764 Functional Loss - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10786155 chr11:10786156 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_5248 0 0 0 0 1 Cytosol 0.438718592671513 0.438718595008649 0.74537968 0 hPsi_site_10665 iPseU_CNN:0.74537968;iRNA_PseU:0 10666 chr9 75784986 75784986 1 + A G UCEC 75784985 + 75784965 75785005 41 AGGATGAAACCAAAGGAGATTATGAGAAAATCCTGGTGGCT AGGATGAAACCAAAGGAGATTGTGAGAAAATCCTGGTGGCT < 41bp 0.82778577035082 0.445285234009572 0.3045904 0.25694904 prediction 0.65557154070164 Functional Loss - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75784985 chr9:75784986 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5249 0 0 1 0 1 Cytosol 0.438718511902813 0.438718577950835 0 0 hPsi_site_10666 iPseU_CNN:0;iRNA_PseU:0 10667 chr9 88592315 88592315 1 + T G UCEC 88592314 + 88592294 88592334 41 CAGTATTCAGCAGAGTGAAATTTACTCGTGTGTTACTGACA CAGTATTCAGCAGAGTGAAATGTACTCGTGTGTTACTGACA < 41bp 0.827774721016129 0.499106734604833 0.2975224 0.19159621 prediction 0.655549442032258 Functional Loss - NAA35 ENSG00000135040 CDS Human protein_coding chr9:88592314 chr9:88592315 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5250 0 0 1 0 2 Cytosol 0.44067219565746 0.435965046861247 0 0 hPsi_site_10667 iPseU_CNN:0;iRNA_PseU:0 10668 chr19 36228077 36228077 1 + A G UCEC 36228076 + 36228056 36228096 41 GAGCCCAGCGTTGCCAGCACTATAAGTTCCGTTACCACCAG GAGCCCAGCGTTGCCAGCACTGTAAGTTCCGTTACCACCAG < 41bp 0.827768266959044 0.426732837482604 0.68007064 0.53629714 prediction 0.655536533918089 Functional Loss - KMT2B ENSG00000272333 CDS Human protein_coding chr19:36228076 chr19:36228077 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5251 0 0 1 0 2 chromatin 0.438718833210143 0.43872213831359 0.287547 0 hPsi_site_10668 iPseU_CNN:0.287547;iRNA_PseU:0 10669 chrX 152140792 152140792 1 + A G rs73641519 152140791 + 152140771 152140811 41 TATTGCATTGCGCAGAACGCTACAGAGCCCATGCTCTTCCC TATTGCATTGCGCAGAACGCTGCAGAGCCCATGCTCTTCCC < 41bp 0.882179555699855 0.554415986770069 0.8228426 0.3550545 prediction 0.655527137859572 Functional Loss - ZNF185 ENSG00000147394 UTR3 Human protein_coding chrX:152140791 chrX:152140792 . . 0 22 hPsi_associated_SNPs_5252 0 0 0 1 0 chromatin 0.438718719760622 0.438718408601796 0.6456852 0 hPsi_site_10669 iPseU_CNN:0.6456852;iRNA_PseU:0 10670 chr18 23772309 23772309 1 + A G LUSC 23772308 + 23772288 23772328 41 TAGTGCAAAAGAAGTTGAATTATATGTAACTGAAATAGAAA TAGTGCAAAAGAAGTTGAATTGTATGTAACTGAAATAGAAA < 41bp 0.864882691715563 0.537126648296666 0.33931798 0.2627724 prediction 0.655512086837793 Functional Loss - PSMA8 ENSG00000154611 CDS Human protein_coding chr18:23772308 chr18:23772309 synonymous SNV . 0 22 hPsi_associated_SNPs_5253 0 0 0 0 1 membrane 0.438694046802473 0.438792628438403 0 0 hPsi_site_10670 iPseU_CNN:0;iRNA_PseU:0 10671 chr3 9780727 9780727 1 + A G PRAD 9780726 + 9780706 9780746 41 AGCTGGACGAGGAAGTAGAGTATGACATGGACGAGGAGGAC AGCTGGACGAGGAAGTAGAGTGTGACATGGACGAGGAGGAC < 41bp 0.827734709639187 0.411548868683456 0.40835965 0.25609037 prediction 0.655469419278374 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9780726 chr3:9780727 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5254 0 0 1 0 1 Nucleus 0.43851213656968 0.438701544502549 0 0 hPsi_site_10671 iPseU_CNN:0;iRNA_PseU:0 10672 chr7 100205338 100205338 1 + A G LUSC 100205337 + 100205317 100205357 41 CTGTCAGTCTTATTGGTGCTTATAAAACTGGAGGACTGGAC CTGTCAGTCTTATTGGTGCTTGTAAAACTGGAGGACTGGAC < 41bp 0.89797206277959 0.570266114256508 0.43199688 0.27961335 prediction 0.655411897046164 Functional Loss - PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205337 chr7:100205338 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_5255 0 0 1 1 2 Endoplasmic reticulum 0.43871729574135 0.438708654331827 0 0 hPsi_site_10672 iPseU_CNN:0;iRNA_PseU:0 10673 chr9 104048480 104048480 1 + A G READ 104048479 + 104048459 104048499 41 TTCTGACCGGAGAATGCTGTTACCTGAACCCCTTACTTCGA TTCTGACCGGAGAATGCTGTTGCCTGAACCCCTTACTTCGA < 41bp 0.900528336766148 0.57282500075474 0.7755196 0.27353054 prediction 0.655406672022816 Functional Loss - PLPPR1 ENSG00000148123 CDS Human protein_coding chr9:104048479 chr9:104048480 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5256 0 0 0 0 2 cytosol 0.438718592995102 0.438718592995102 0.5510392 0 hPsi_site_10673 iPseU_CNN:0.5510392;iRNA_PseU:0 10674 chr19 45851307 45851307 1 + A G HNSC 45851306 + 45851286 45851326 41 AGTACGCGGGGCAGGGCCGCTATGAGGTGGCGGTGCCTCTG AGTACGCGGGGCAGGGCCGCTGTGAGGTGGCGGTGCCTCTG < 41bp 0.904767928678365 0.57706799445333 0.34995028 0.2655247 prediction 0.65539986845007 Functional Loss - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45851306 chr19:45851307 nonsynonymous SNV 0.965 4 22 hPsi_associated_SNPs_5257 0 0 0 0 0 nucleolus 0.438717371622216 0.438718531527537 0 0 hPsi_site_10674 iPseU_CNN:0;iRNA_PseU:0 10675 chr7 36438849 36438849 1 + A G OV 36438848 + 36438828 36438868 41 GTGCAGCCACAAGCAGCAGATACCATCAGTGATTCTGTTGC GTGCAGCCACAAGCAGCAGATGCCATCAGTGATTCTGTTGC < 41bp 0.827672251842045 0.415093677350193 0.28885263 0.18048194 prediction 0.65534450368409 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36438848 chr7:36438849 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5258 0 0 1 0 0 Nucleus 0.439292845567399 0.438884060622718 0 0 hPsi_site_10675 iPseU_CNN:0;iRNA_PseU:0 10676 chr10 6154205 6154205 1 + A G LUAD 6154204 + 6154184 6154224 41 CGCACAAGATCATGCAGAAGTACGGCTTCCGGGAGGGCCAG CGCACAAGATCATGCAGAAGTGCGGCTTCCGGGAGGGCCAG < 41bp 0.827665286255886 0.411595382433402 0.40949598 0.29974824 prediction 0.655330572511773 Functional Loss - RBM17 ENSG00000134453 CDS Human protein_coding chr10:6154204 chr10:6154205 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_5259 0 0 1 0 1 Ribosome 0.438718572517374 0.438718593902487 0 0 hPsi_site_10676 iPseU_CNN:0;iRNA_PseU:0 10677 chr13 111929950 111929950 1 + A C BLCA 111929949 + 111929929 111929969 41 ATTAGGAAAAGAATGAAAGATATCTTCTACTCTTCCCAAAT ATTAGGAAAAGAATGAAAGATCTCTTCTACTCTTCCCAAAT < 41bp 0.830035650506839 0.502389671029784 0.63657206 0.3172557 prediction 0.65529195895411 Functional Loss - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111929949 chr13:111929950 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_5260 0 0 1 1 2 Nucleus 0.438718593779863 0.438718602834131 0.27314412 0 hPsi_site_10677 iPseU_CNN:0.27314412;iRNA_PseU:0 10678 chr17 49365466 49365466 1 + A G HNSC 49365465 + 49365445 49365485 41 AACCCAAAGCCAATAAAAGCTATAATGAACTTGGTTACAGG AACCCAAAGCCAATAAAAGCTGTAATGAACTTGGTTACAGG < 41bp 0.827621017019144 0.42752372544396 0.25267893 0.27048248 prediction 0.655242034038289 Functional Loss - UTP18 ENSG00000011260 CDS Human protein_coding chr17:49365465 chr17:49365466 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_5261 0 0 1 0 2 Ribosome 0.438671352608432 0.438290485031526 0 0 hPsi_site_10678 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10679 chr19 49447704 49447704 1 + T G KIRP 49447703 + 49447683 49447723 41 CCAGTCCCAAAGGACTGCAATTTTGACAACGGGGCAGGCAT CCAGTCCCAAAGGACTGCAATGTTGACAACGGGGCAGGCAT < 41bp 0.82775863235532 0.50014689753785 0.38907495 0.28596175 prediction 0.655223469634941 Functional Loss - DHDH ENSG00000104808 CDS Human protein_coding chr19:49447703 chr19:49447704 nonsynonymous SNV 0.060 2 22 hPsi_associated_SNPs_5262 0 0 0 0 1 cytosol 0.43871859882697 0.43871916934815 0 0 hPsi_site_10679 iPseU_CNN:0;iRNA_PseU:0 10680 chr12 93793017 93793017 1 + A G COAD 93793016 + 93792996 93793036 41 TCTCCAGTGTCATAAACCTGTACATGCAGAGTATCTGGAAA TCTCCAGTGTCATAAACCTGTGCATGCAGAGTATCTGGAAA < 41bp 0.893777649929834 0.566172827809829 0.45015267 0.22513142 prediction 0.655209644240009 Functional Loss - NUDT4 ENSG00000173598 CDS Human protein_coding chr12:93793016 chr12:93793017 synonymous SNV . 0 22 hPsi_associated_SNPs_5263 0 0 0 0 1 Ribosome 0.438717196503169 0.438679248188841 0 0 hPsi_site_10680 iPseU_CNN:0;iRNA_PseU:0 10681 chr2 27280173 27280173 1 + A G STAD 27280172 + 27280152 27280192 41 AAAGGTCTTTATGTCTTAGCTACACACTTGAATGCAACTAC AAAGGTCTTTATGTCTTAGCTGCACACTTGAATGCAACTAC < 41bp 0.892700652951872 0.565109095089176 0.6547149 0.26872164 prediction 0.655183115725391 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280172 chr2:27280173 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5264 0 0 1 1 1 Cytosol 0.438731615242591 0.438176493268319 0.3094298 0 hPsi_site_10681 iPseU_CNN:0.3094298;iRNA_PseU:0 10682 chrX 130678192 130678192 1 + A G LIHC 130678191 + 130678171 130678211 41 AATGGATTTATGATCTTTCTTATTCACTTTGACCCCAACCT AATGGATTTATGATCTTTCTTGTTCACTTTGACCCCAACCT < 41bp 0.875112419011829 0.547538793015979 0.41602176 0.33467442 prediction 0.655147251991699 Functional Loss - OR13H1 ENSG00000171054 CDS Human protein_coding chrX:130678191 chrX:130678192 nonsynonymous SNV 0.938 0 22 hPsi_associated_SNPs_5265 0 0 0 0 0 exosome 0.438718596510302 0.438726023867852 0 0 hPsi_site_10682 iPseU_CNN:0;iRNA_PseU:0 10683 chr14 55510726 55510726 1 + A G UCEC 55510725 + 55510705 55510745 41 GAAGACTATTTATTCTCTGTTAGTTTTAGACGCTATAGTCG GAAGACTATTTATTCTCTGTTGGTTTTAGACGCTATAGTCG < 41bp 0.827568325722523 0.439884713284282 0.32798144 0.24685517 prediction 0.655136651445046 Functional Loss - SOCS4 ENSG00000180008 CDS Human protein_coding chr14:55510725 chr14:55510726 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5266 0 0 1 0 0 Cytosol 0.438718776134 0.438718592995881 0 0 hPsi_site_10683 iPseU_CNN:0;iRNA_PseU:0 10684 chr15 99672311 99672311 1 + A C COAD 99672310 + 99672290 99672330 41 CTGCAGGGAAGGTTGGTGATTATTTTGCAACAGAAGAGTCA CTGCAGGGAAGGTTGGTGATTCTTTTGCAACAGAAGAGTCA < 41bp 0.827513212041801 0.48188501986062 0.49642915 0.33711636 prediction 0.655026424083601 Functional Loss - SYNM ENSG00000182253 CDS Human protein_coding chr15:99672310 chr15:99672311 nonsynonymous SNV 0.027 0 22 hPsi_associated_SNPs_5267 0 0 0 0 0 exosome 0.438718732001371 0.438718592995097 0 0 hPsi_site_10684 iPseU_CNN:0;iRNA_PseU:0 10685 chr17 55065149 55065149 1 + A G BLCA 55065148 + 55065128 55065168 41 GCCTATGCCAAGGACCTGGCTATGGTGGCTTCAGACATGAT GCCTATGCCAAGGACCTGGCTGTGGTGGCTTCAGACATGAT < 41bp 0.903563488747873 0.576052868530574 0.35683075 0.27515674 prediction 0.655021240434599 Functional Loss - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55065148 chr17:55065149 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_5268 0 0 1 0 2 Ribosome 0.438722779208999 0.438739394858277 0 0 hPsi_site_10685 iPseU_CNN:0;iRNA_PseU:0 10686 chr16 67916652 67916652 1 + A G rs200348040 67916651 + 67916631 67916671 41 GGAGGCCAGGGAGCCTGTGCTAGCCCAGCTGCGGGGCCTGG GGAGGCCAGGGAGCCTGTGCTGGCCCAGCTGCGGGGCCTGG < 41bp 0.827507035966212 0.403694822093088 0.44978124 0.23380458 prediction 0.655014071932424 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67916651 chr16:67916652 synonymous SNV . 0 22 hPsi_associated_SNPs_5269 0 0 1 0 1 Cytosol 0.438718902288075 0.438718592351939 0 0 hPsi_site_10686 iPseU_CNN:0;iRNA_PseU:0 10687 chr4 89628547 89628547 1 + A G rs114996964 89628546 + 89628526 89628566 41 TAGACTGACCTGTCCTTTTTTATCTGCGCATGCGAGAACAT TAGACTGACCTGTCCTTTTTTGTCTGCGCATGCGAGAACAT < 41bp 0.827495553518332 0.448545409233018 0.5390271 0.29192007 prediction 0.654991107036665 Functional Loss - HERC3 ENSG00000138641 UTR3 Human protein_coding chr4:89628546 chr4:89628547 . . 0 22 hPsi_associated_SNPs_5270 0 0 1 0 0 Ribosome 0.439153174819759 0.437843419564669 0.0780542 0 hPsi_site_10687 iPseU_CNN:0.0780542;iRNA_PseU:0 10688 chr15 25429473 25429473 1 + A G rs72546345 25429472 + 25429452 25429492 41 TGGGTCAATGATGAGAACCTTACATTGTTCTGAAGAGAGAT TGGGTCAATGATGAGAACCTTGCATTGTTCTGAAGAGAGAT < 41bp 0.835816451443416 0.50834045976923 0.33555508 0.2787528 prediction 0.654951983348373 Functional Loss - SNORD115-8 ENSG00000200726 ncRNA_exonic Human snoRNA chr15:25429472 chr15:25429473 . . 0 22 hPsi_associated_SNPs_5271 0 0 1 0 0 unknown 0.43871588329832 0.438716920561171 0 0 hPsi_site_10688 iPseU_CNN:0;iRNA_PseU:0 10689 chr1 39470364 39470364 1 + A G rs4147753 39470363 + 39470343 39470383 41 AAAGCGAAGGTCTGCGGTCCTATATCTACAGACACGTGGTG AAAGCGAAGGTCTGCGGTCCTGTATCTACAGACACGTGGTG < 41bp 0.827471685043934 0.454848476545962 0.49984917 0.22822118 prediction 0.654943370087867 Functional Loss - AKIRIN1 ENSG00000174574 UTR3 Human protein_coding chr1:39470363 chr1:39470364 . . 0 22 hPsi_associated_SNPs_5272 0 0 1 2 0 Ribosome 0.438719005045835 0.438718061482986 0 0 hPsi_site_10689 iPseU_CNN:0;iRNA_PseU:0 10690 chr6 76388536 76388536 1 + A G rs190783749 76388535 + 76388515 76388555 41 ATTTTGTTACAGGTTGATAGTATATCCACCACCTCCAGCTA ATTTTGTTACAGGTTGATAGTGTATCCACCACCTCCAGCTA < 41bp 0.827423549777862 0.422786566179335 0.3561354 0.23501271 prediction 0.654847099555724 Functional Loss - SENP6 ENSG00000112701 CDS Human protein_coding chr6:76388535 chr6:76388536 synonymous SNV . 0 22 hPsi_associated_SNPs_5273 0 0 1 0 1 Cytosol 0.438163011333693 0.434709143879717 0 0 hPsi_site_10690 iPseU_CNN:0;iRNA_PseU:0 10691 chr2 48025815 48025815 1 + A G COAD 48025814 + 48025794 48025834 41 AATTGAGAGTGAAGAGGAAGTACAGCCTAAGACACAAGGAT AATTGAGAGTGAAGAGGAAGTGCAGCCTAAGACACAAGGAT < 41bp 0.827419118732426 0.424817029806308 0.35409325 0.32646132 prediction 0.654838237464852 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48025814 chr2:48025815 synonymous SNV . 0 22 hPsi_associated_SNPs_5274 0 0 1 0 2 Nucleus 0.438713330962679 0.438714194525326 0 0 hPsi_site_10691 iPseU_CNN:0;iRNA_PseU:0 10692 chr6 37298846 37298846 1 + A G LUSC 37298845 + 37298825 37298865 41 CCTCATGCTGCTACAGAACCTACCTACAATACACTGGGGCA CCTCATGCTGCTACAGAACCTGCCTACAATACACTGGGGCA < 41bp 0.827413904944751 0.42189256662441 0.41487256 0.25717527 prediction 0.654827809889503 Functional Loss - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37298845 chr6:37298846 synonymous SNV . 0 22 hPsi_associated_SNPs_5275 0 0 1 2 0 chromatin 0.438718592540991 0.438718592912669 0 0 hPsi_site_10692 iPseU_CNN:0;iRNA_PseU:0 10693 chr19 47773942 47773942 1 + A C rs543129639 47773941 + 47773921 47773961 41 CCAAGGCAGCGCCCAGGGCCTACAGGTGGGGCACCCCTTCT CCAAGGCAGCGCCCAGGGCCTCCAGGTGGGGCACCCCTTCT < 41bp 0.827410767474689 0.477576329709601 0.3147743 0.1980201 prediction 0.654821534949378 Functional Loss - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47773941 chr19:47773942 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_5276 0 0 0 0 1 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_10693 iPseU_CNN:0;iRNA_PseU:0 10694 chr1 149376790 149376790 1 + A G UCEC 149376789 + 149376769 149376809 41 AGAGGCCTGGTTTGCAGCTTTACTTCTCCTTCTACATGGGC AGAGGCCTGGTTTGCAGCTTTGCTTCTCCTTCTACATGGGC < 41bp 0.827408025066108 0.457996516931038 0.6429249 0.30651224 prediction 0.654816050132216 Functional Loss - FCGR1CP ENSG00000253193 ncRNA_exonic Human other chr1:149376789 chr1:149376790 . . 0 22 hPsi_associated_SNPs_5277 0 0 0 4 0 unknown 0.438716216986226 0.438716957301582 0.2858498 0 hPsi_site_10694 iPseU_CNN:0.2858498;iRNA_PseU:0 10695 chr19 10403541 10403541 1 + A G COAD 10403540 + 10403520 10403560 41 GAGCGCAGAGCTTCGTGTCCTATGTGAGTTGGTGATAACCC GAGCGCAGAGCTTCGTGTCCTGTGTGAGTTGGTGATAACCC < 41bp 0.827378553262369 0.426207628390329 0.74193704 0.5728156 prediction 0.654757106524739 Functional Loss - ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10403540 chr19:10403541 synonymous SNV . 0 22 hPsi_associated_SNPs_5278 0 0 0 0 1 Endoplasmic reticulum 0.439103583007456 0.438936562145822 0.33824288 0 hPsi_site_10695 iPseU_CNN:0.33824288;iRNA_PseU:0 10696 chr16 81390507 81390507 1 + A G STAD 81390506 + 81390486 81390526 41 ATTGTCAAAGAGTGTAGCAATATACCGCTCAGCCAGCCGCA ATTGTCAAAGAGTGTAGCAATGTACCGCTCAGCCAGCCGCA < 41bp 0.827366429824101 0.411952631530456 0.39050376 0.29258186 prediction 0.654732859648201 Functional Loss - GAN ENSG00000261609 CDS Human protein_coding chr16:81390506 chr16:81390507 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_5279 0 0 1 0 0 Ribosome 0.438718844169737 0.438720158578205 0 0 hPsi_site_10696 iPseU_CNN:0;iRNA_PseU:0 10697 chr12 64812728 64812728 1 + A G BLCA 64812727 + 64812707 64812747 41 GTCTTCGCCTTGCTTTTTGTTACAGAGTATCTCACTAAGTG GTCTTCGCCTTGCTTTTTGTTGCAGAGTATCTCACTAAGTG < 41bp 0.901482306617497 0.574120928584779 0.70260197 0.34283718 prediction 0.654722756065437 Functional Loss - XPOT ENSG00000184575 CDS Human protein_coding chr12:64812727 chr12:64812728 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5280 0 0 1 0 1 Ribosome 0.438231919085949 0.436637618044485 0.40520394 0 hPsi_site_10697 iPseU_CNN:0.40520394;iRNA_PseU:0 10698 chr1 120056750 120056750 1 + A G UCEC 120056749 + 120056729 120056769 41 AGCCGATTCCTTTCTGCTAGTATAAACGAGGCCCTGAACAA AGCCGATTCCTTTCTGCTAGTGTAAACGAGGCCCTGAACAA < 41bp 0.827349250643344 0.427840145268842 0.39731914 0.24939707 prediction 0.654698501286688 Functional Loss - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120056749 chr1:120056750 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5281 0 0 0 0 0 exosome 0.438718593012045 0.438718592534186 0 0 hPsi_site_10698 iPseU_CNN:0;iRNA_PseU:0 10699 chr20 30730789 30730789 1 + A G SKCM 30730788 + 30730768 30730808 41 CTGTTGCTGTGTTTCAGATCTACCTGCACAACCACCTCTCA CTGTTGCTGTGTTTCAGATCTGCCTGCACAACCACCTCTCA < 41bp 0.827334514703046 0.412714145890771 0.38808185 0.20995873 prediction 0.654669029406091 Functional Loss - TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30730788 chr20:30730789 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5282 0 0 1 0 1 Nucleus 0.438698816153701 0.438718292885164 0 0 hPsi_site_10699 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10700 chr19 14507189 14507189 1 + A G rs570748230 14507188 + 14507168 14507208 41 CAGCAGAACCCAAGGCTCTGTAAAAGCTACGGCACCTGCGT CAGCAGAACCCAAGGCTCTGTGAAAGCTACGGCACCTGCGT < 41bp 0.827319905401946 0.409173228190497 0.6544336 0.34103298 prediction 0.654639810803892 Functional Loss - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14507188 chr19:14507189 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_5283 0 0 0 0 2 Cytosol 0.43891591909481 0.43871957360661 0.3088672 0 hPsi_site_10700 iPseU_CNN:0.3088672;iRNA_PseU:0 Catecholaminergic polymorphic ventricular tachycardia Catecholaminergic polymorphic ventricular tachycardia 10701 chr10 124909611 124909611 1 + A G rs369213919 124909610 + 124909590 124909630 41 ACCTCTCGGCCTTACCTCTCTACAACCTATACAACAAGCTC ACCTCTCGGCCTTACCTCTCTGCAACCTATACAACAAGCTC < 41bp 0.895730748427746 0.568413303860361 0.64231354 0.2681204 prediction 0.65463488913477 Functional Loss - HMX2 ENSG00000188816 CDS Human protein_coding chr10:124909610 chr10:124909611 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_5284 0 0 0 0 0 exosome 0.438752273754947 0.43872756400691 0.28462708 0 hPsi_site_10701 iPseU_CNN:0.28462708;iRNA_PseU:0 10702 chr9 125281734 125281734 1 + A G UCEC 125281733 + 125281713 125281753 41 AACTCAGATGTATTTTTTCATATTTTTCACTGATCTAGACA AACTCAGATGTATTTTTTCATGTTTTTCACTGATCTAGACA < 41bp 0.876587335064563 0.549273615447645 0.23940784 0.19699413 prediction 0.654627439233837 Functional Loss - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125281733 chr9:125281734 nonsynonymous SNV 0.696 0 22 hPsi_associated_SNPs_5285 0 0 0 0 0 exosome 0.439986144160594 0.438416822068668 0 0 hPsi_site_10702 iPseU_CNN:0;iRNA_PseU:0 10703 chr3 50683654 50683654 1 + A G LGG 50683653 + 50683633 50683673 41 GGAGGATTCGCCTGGGCCAGTACGGCTTCCCCAATCCTGAG GGAGGATTCGCCTGGGCCAGTGCGGCTTCCCCAATCCTGAG < 41bp 0.908392512719186 0.581093829643133 0.59905434 0.29175967 prediction 0.654597366152105 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683653 chr3:50683654 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5286 0 0 1 0 2 Ribosome 0.43871859302772 0.438718592995457 0.19810868 0 hPsi_site_10703 iPseU_CNN:0.19810868;iRNA_PseU:0 10704 chr10 70547978 70547978 1 + A C BRCA 70547977 + 70547957 70547997 41 AAAATGTTGGCCTCATTGTGTACAATGGTGCAATGGTAGAT AAAATGTTGGCCTCATTGTGTCCAATGGTGCAATGGTAGAT < 41bp 0.854292740920896 0.526997034270483 0.44776717 0.30689746 prediction 0.654591413300827 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70547977 chr10:70547978 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5287 0 0 1 0 1 Nucleus 0.438718978138531 0.438736716689017 0 0 hPsi_site_10704 iPseU_CNN:0;iRNA_PseU:0 10705 chr2 223423611 223423611 1 + A G rs115087227 223423610 + 223423590 223423630 41 GCTTCACAGGTTTCTGGGATTACCCTGAGTCTCAAACAGTT GCTTCACAGGTTTCTGGGATTGCCCTGAGTCTCAAACAGTT < 41bp 0.827214098593934 0.439002539932505 0.30712938 0.1886355 prediction 0.654428197187868 Functional Loss - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423610 chr2:223423611 synonymous SNV . 0 22 hPsi_associated_SNPs_5288 0 0 0 0 0 Ribosome 0.438718593328067 0.43871859150442 0 0 hPsi_site_10705 iPseU_CNN:0;iRNA_PseU:0 10706 chr4 39482474 39482474 1 + A C UCEC 39482473 + 39482453 39482493 41 AAAACCCTGAAGGGACACAGTAATTATGTCTTTTGCTGTAA AAAACCCTGAAGGGACACAGTCATTATGTCTTTTGCTGTAA < 41bp 0.827211572380405 0.494709324363029 0.3451763 0.26978576 prediction 0.654423144760811 Functional Loss - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482473 chr4:39482474 . . 0 22 hPsi_associated_SNPs_5289 0 0 0 0 0 unknown 0.438740117473437 0.438709813128744 0 0 hPsi_site_10706 iPseU_CNN:0;iRNA_PseU:0 10707 chr11 74904330 74904330 1 + A G rs202195350 74904329 + 74904309 74904349 41 GCTGGTGGTCCTGTCCCAGGTATGCTTGTCATCCATGGCTG GCTGGTGGTCCTGTCCCAGGTGTGCTTGTCATCCATGGCTG < 41bp 0.906059673448453 0.578856072693811 0.59372526 0.33209205 prediction 0.654407201509284 Functional Loss - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74904329 chr11:74904330 synonymous SNV . 0 22 hPsi_associated_SNPs_5290 0 0 0 0 1 cytosol 0.438758671017586 0.438732860669507 0.18745052 0 hPsi_site_10707 iPseU_CNN:0.18745052;iRNA_PseU:0 10708 chr19 55048320 55048320 1 + A G rs114526165 55048319 + 55048299 55048339 41 CTGGCGGGACCTATAGATGCTATGGTTCCTTCAATGACTCT CTGGCGGGACCTATAGATGCTGTGGTTCCTTCAATGACTCT < 41bp 0.897035929132308 0.569854644131862 0.32016912 0.27857926 prediction 0.654362570000891 Functional Loss - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55048319 chr19:55048320 nonsynonymous SNV 0.099 2 22 hPsi_associated_SNPs_5291 0 0 0 0 1 Nucleus 0.438718562904599 0.438718547648225 0 0 hPsi_site_10708 iPseU_CNN:0;iRNA_PseU:0 10709 chr9 100245395 100245395 1 + A G UCEC 100245394 + 100245374 100245414 41 AAAAAGTCCATGGTGGACCATACGAGCGCTTTCTCCACAGA AAAAAGTCCATGGTGGACCATGCGAGCGCTTTCTCCACAGA < 41bp 0.82716750344044 0.413627052949094 0.44463784 0.28593212 prediction 0.65433500688088 Functional Loss - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100245394 chr9:100245395 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_5292 0 0 1 0 0 Ribosome 0.439298691446372 0.438717458300036 0 0 hPsi_site_10709 iPseU_CNN:0;iRNA_PseU:0 10710 chr2 231927291 231927291 1 + A G UCEC 231927290 + 231927270 231927310 41 TAGTGGCATCTAAAGTATTTTATCACCTGGGGGCTTTTGAG TAGTGGCATCTAAAGTATTTTGTCACCTGGGGGCTTTTGAG < 41bp 0.827142491575191 0.421773902087732 0.3498716 0.27445573 prediction 0.654284983150382 Functional Loss - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231927290 chr2:231927291 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5293 0 0 1 0 2 Nucleus 0.438718591076378 0.438718579902796 0 0 hPsi_site_10710 iPseU_CNN:0;iRNA_PseU:0 10711 chr17 38499018 38499018 1 + A G STAD 38499017 + 38498997 38499037 41 CCTTCCTAGTGGTGGATTTTTATAACCAGAACCGGGCCTGT CCTTCCTAGTGGTGGATTTTTGTAACCAGAACCGGGCCTGT < 41bp 0.82711840708342 0.435310997455249 0.5320416 0.38988388 prediction 0.654236814166839 Functional Loss - RARA ENSG00000131759 CDS Human protein_coding chr17:38499017 chr17:38499018 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5294 0 0 0 0 0 chromatin 0.438718592995091 0.438718592994809 0.0640832 0 hPsi_site_10711 iPseU_CNN:0.0640832;iRNA_PseU:0 10712 chr18 48513392 48513392 1 + A G rs144344977 48513391 + 48513371 48513411 41 AAAGCAAGCTGAATCAGTGTTAGATCTCCAAGAAGTGACTC AAAGCAAGCTGAATCAGTGTTGGATCTCCAAGAAGTGACTC < 41bp 0.827114617353859 0.437119411563884 0.5808041 0.2673213 prediction 0.654229234707717 Functional Loss - ELAC1 ENSG00000141642 CDS Human protein_coding chr18:48513391 chr18:48513392 synonymous SNV . 0 22 hPsi_associated_SNPs_5295 0 0 0 0 0 Cytosol 0.437489214573872 0.438694942314186 0.1616082 0 hPsi_site_10712 iPseU_CNN:0.1616082;iRNA_PseU:0 10713 chr1 112002144 112002144 1 + A G rs141292134 112002143 + 112002123 112002163 41 GTATAGAGTATATAAGGAAGTAAAGAATCGCCTGGACTATC GTATAGAGTATATAAGGAAGTGAAGAATCGCCTGGACTATC < 41bp 0.827086786948938 0.421630670149688 0.46529534 0.27138743 prediction 0.654173573897876 Functional Loss - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:112002143 chr1:112002144 synonymous SNV . 0 22 hPsi_associated_SNPs_5296 0 0 1 0 1 Ribosome 0.438718593537174 0.43871859281758 0 0 hPsi_site_10713 iPseU_CNN:0;iRNA_PseU:0 10714 chr17 6547860 6547860 1 + T C HNSC 6547861 - 6547841 6547881 41 AGATTCTACATTGGCAGCACTATTCCCGGAAGCGGATGCGC AGATTCTACATTGGCAGCACTGTTCCCGGAAGCGGATGCGC < 41bp 0.827085655130107 0.436665015426482 0.6574973 0.18647516 prediction 0.654171310260214 Functional Loss - MED31 ENSG00000108590 CDS Human protein_coding chr17:6547861 chr17:6547860 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5297 0 0 1 0 0 Cytosol 0.438719003987846 0.43871861600707 0.3149946 0 hPsi_site_10714 iPseU_CNN:0.3149946;iRNA_PseU:0 10715 chr9 95870078 95870078 1 + A G COAD 95870077 + 95870057 95870097 41 CGTTACTACCCACAGATCCTTACCAACAAGGAGGCGGAAAA CGTTACTACCCACAGATCCTTGCCAACAAGGAGGCGGAAAA < 41bp 0.893894195588249 0.566817384933194 0.34169495 0.18774396 prediction 0.65415362131011 Functional Loss - CARD19 ENSG00000165233 CDS Human protein_coding chr9:95870077 chr9:95870078 nonsynonymous SNV 0.984 1 22 hPsi_associated_SNPs_5298 0 0 1 0 2 Ribosome 0.438718593028161 0.43871856547803 0 0 hPsi_site_10715 iPseU_CNN:0;iRNA_PseU:0 10716 chr3 15297718 15297718 1 + T G BLCA 15297719 - 15297699 15297739 41 AGTGGCAGTGGTGGCAGCAGTAAGAGCCAAAGCAGCACCTC AGTGGCAGTGGTGGCAGCAGTCAGAGCCAAAGCAGCACCTC < 41bp 0.866653173484055 0.539577527067678 0.6385926 0.23844513 prediction 0.654151292832756 Functional Loss - SH3BP5 ENSG00000131370 CDS Human protein_coding chr3:15297719 chr3:15297718 nonsynonymous SNV 0.510 0 22 hPsi_associated_SNPs_5299 0 0 0 0 1 Ribosome 0.438939049579404 0.438757493123377 0.2771852 0 hPsi_site_10716 iPseU_CNN:0.2771852;iRNA_PseU:0 10717 chr6 26323059 26323059 1 + A G rs60246846 26323058 + 26323038 26323078 41 TAACCCGGGACCACGTGGCCTAATGGATAAGGCGTCTGACT TAACCCGGGACCACGTGGCCTGATGGATAAGGCGTCTGACT < 41bp 0.845889193040611 0.51882931856271 0.5281203 0.32302898 prediction 0.654119748955802 Functional Loss - HIST1H4H;BTN3A2 ENSG00000220875 upstream Human processed_pseudogene chr6:26323058 chr6:26323059 . . 0 22 hPsi_associated_SNPs_5300 0 0 1 0 0 unknown 0.438718592994678 0.438718592994916 0.0562406 0 hPsi_site_10717 iPseU_CNN:0.0562406;iRNA_PseU:0 10718 chr6 123369834 123369834 1 + A G UCEC 123369833 + 123369813 123369853 41 CATGGTATATCCATGCCCTGTACACCGTGATCCGGCCTTTC CATGGTATATCCATGCCCTGTGCACCGTGATCCGGCCTTTC < 41bp 0.827049897492529 0.411601929817523 0.6277611 0.2731151 prediction 0.654099794985057 Functional Loss - CLVS2 ENSG00000146352 CDS Human protein_coding chr6:123369833 chr6:123369834 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5301 0 0 0 0 1 exosome 0.439337513783177 0.441112239402688 0.2555222 0 hPsi_site_10718 iPseU_CNN:0.2555222;iRNA_PseU:0 10719 chr19 58119219 58119219 1 + A G rs77381064 58119218 + 58119198 58119238 41 ATGTGGGAAGCATGTGTAGCTATGTTGTACTCTCTAAACCT ATGTGGGAAGCATGTGTAGCTGTGTTGTACTCTCTAAACCT < 41bp 0.827047380541347 0.487183906418403 0.45950776 0.37956932 prediction 0.654094761082694 Functional Loss - ZNF530 ENSG00000183647 UTR3 Human protein_coding chr19:58119218 chr19:58119219 . . 0 22 hPsi_associated_SNPs_5302 0 0 1 2 0 Nucleus 0.438727876321971 0.438717294884039 0 0 hPsi_site_10719 iPseU_CNN:0;iRNA_PseU:0 10720 chr3 52727250 52727250 1 + T G COAD 52727249 + 52727229 52727269 41 CTACAGGAATTCTCTGGAATTTTTTACTGTGCTTGCTCAGA CTACAGGAATTCTCTGGAATTGTTTACTGTGCTTGCTCAGA < 41bp 0.830442965937784 0.503401137022012 0.27972275 0.25053132 prediction 0.654083657831545 Functional Loss - GNL3 ENSG00000163938 CDS Human protein_coding chr3:52727249 chr3:52727250 nonsynonymous SNV 0.783 2 22 hPsi_associated_SNPs_5303 0 0 1 0 1 Ribosome 0.437324741065248 0.436715178605679 0 0 hPsi_site_10720 iPseU_CNN:0;iRNA_PseU:0 10721 chr16 31925956 31925956 1 + A G LUSC 31925955 + 31925935 31925975 41 GTGAAGGGCACAATGGATGTTATGATGAAAAGACTTTTAAA GTGAAGGGCACAATGGATGTTGTGATGAAAAGACTTTTAAA < 41bp 0.827040459418228 0.439831483063213 0.753787 0.29428205 prediction 0.654080918836456 Functional Loss - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31925955 chr16:31925956 nonsynonymous SNV 0.095 1 22 hPsi_associated_SNPs_5304 0 0 0 0 0 chromatin 0.43871000824883 0.438717001443533 0.507574 0 hPsi_site_10721 iPseU_CNN:0.507574;iRNA_PseU:0 10722 chr11 125478108 125478108 1 + T G LUSC 125478107 + 125478087 125478127 41 CAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCG CAAGTTGAATCCACAACAATTGGAAGTTCTTTTCCGGAGCG < 41bp 0.833364644502559 0.506347168153575 0.43679887 0.31930327 prediction 0.654034952697967 Functional Loss - STT3A ENSG00000134910 CDS Human protein_coding chr11:125478107 chr11:125478108 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_5305 0 0 1 0 1 Endoplasmic reticulum 0.438722010577948 0.438718592998677 0 0 hPsi_site_10722 iPseU_CNN:0;iRNA_PseU:0 10723 chr2 44428750 44428750 1 + A G LUAD 44428749 + 44428729 44428769 41 GGTTCAACTGCAGTGGGAGTTATGATTTCACCTAAGCATAT GGTTCAACTGCAGTGGGAGTTGTGATTTCACCTAAGCATAT < 41bp 0.893250497282391 0.56624388015122 0.637068 0.5283096 prediction 0.654013234262343 Functional Loss - PPM1B ENSG00000138032 CDS Human protein_coding chr2:44428749 chr2:44428750 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_5306 0 0 1 0 0 Ribosome 0.430010471033143 0.438643348705731 0.2175168 0 hPsi_site_10723 iPseU_CNN:0.2175168;iRNA_PseU:0 10724 chr19 11978470 11978470 1 + A G UCEC 11978469 + 11978449 11978489 41 AAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCA AAAGAATGTGGAAAAAACATTGTTTACCATTCAAGCATTCA < 41bp 0.826990074133189 0.442110218428513 0.34199613 0.29313284 prediction 0.653980148266378 Functional Loss - ZNF439 ENSG00000171291 CDS Human protein_coding chr19:11978469 chr19:11978470 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5307 0 0 0 0 0 exosome 0.439370865017898 0.439190456453374 0 0 hPsi_site_10724 iPseU_CNN:0;iRNA_PseU:0 10725 chr3 160285824 160285824 1 + A G UCEC 160285823 + 160285803 160285843 41 GGCTATGGTGGGGCCAGCAGTATGCGAGGCATCACCACCAT GGCTATGGTGGGGCCAGCAGTGTGCGAGGCATCACCACCAT < 41bp 0.878066729602521 0.551100869437417 0.552418 0.28495103 prediction 0.653931720330208 Functional Loss - KPNA4;ARL14 ENSG00000229320 ncRNA_exonic Human transcribed_processed_pseudogene chr3:160285823 chr3:160285824 . . 0 22 hPsi_associated_SNPs_5308 0 0 0 0 0 unknown 0.438718513240696 0.438718492459211 0.104836 0 hPsi_site_10725 iPseU_CNN:0.104836;iRNA_PseU:0 10726 chr12 55714897 55714897 1 + A G UCEC 55714896 + 55714876 55714916 41 CATTACTGTAGGTCTAATATTATTGACCATTTTACCTGTGA CATTACTGTAGGTCTAATATTGTTGACCATTTTACCTGTGA < 41bp 0.826953201343488 0.451956974646278 0.26880702 0.21039215 prediction 0.653906402686976 Functional Loss - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55714896 chr12:55714897 nonsynonymous SNV 0.756 0 22 hPsi_associated_SNPs_5309 0 0 0 0 0 unknown 0.438722596991952 0.43871877474521 0 0 hPsi_site_10726 iPseU_CNN:0;iRNA_PseU:0 10727 chr2 27302028 27302028 1 + A G LIHC 27302027 + 27302007 27302047 41 CTCCTCGAGGTTTCAGCCTCTACACAGGTTCCAGTGGGGCC CTCCTCGAGGTTTCAGCCTCTGCACAGGTTCCAGTGGGGCC < 41bp 0.826952998995845 0.43481290695128 0.32924902 0.30484295 prediction 0.65390599799169 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302027 chr2:27302028 nonsynonymous SNV 0.888 3 22 hPsi_associated_SNPs_5310 0 0 0 0 1 Cytosol 0.439678555478767 0.438517398873722 0 0 hPsi_site_10727 iPseU_CNN:0;iRNA_PseU:0 10728 chr12 121154816 121154816 1 + A G OV 121154815 + 121154795 121154835 41 GGAACACTTGTGAACATATCTATGAGTTTCCCCAGCTTTCG GGAACACTTGTGAACATATCTGTGAGTTTCCCCAGCTTTCG < 41bp 0.826949788374621 0.435823768274451 0.24875513 0.22269002 prediction 0.653899576749241 Functional Loss - UNC119B ENSG00000175970 CDS Human protein_coding chr12:121154815 chr12:121154816 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5311 0 0 1 0 1 Ribosome 0.438718592984859 0.438718592155475 0 0 hPsi_site_10728 iPseU_CNN:0;iRNA_PseU:0 10729 chr10 91177581 91177581 1 + A G GBM 91177580 + 91177560 91177600 41 GGGCCTTTGAGAAAGGCTGTTACCCTGAACCCAGATAACAG GGGCCTTTGAGAAAGGCTGTTGCCCTGAACCCAGATAACAG < 41bp 0.826930057723755 0.423629046194858 0.7495444 0.28596175 prediction 0.65386011544751 Functional Loss - IFIT5 ENSG00000152778 CDS Human protein_coding chr10:91177580 chr10:91177581 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_5312 0 0 0 0 1 exosome 0.438718592994755 0.438718592994208 0.4990888 0 hPsi_site_10729 iPseU_CNN:0.4990888;iRNA_PseU:0 10730 chr19 54656182 54656182 1 + A G UCEC 54656181 + 54656161 54656201 41 ACAGACATCATCCTGAGCAGTACATCAGCACCTCCGGCCTC ACAGACATCATCCTGAGCAGTGCATCAGCACCTCCGGCCTC < 41bp 0.826913630231006 0.404836616936533 0.60228515 0.2790638 prediction 0.653827260462013 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656181 chr19:54656182 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_5313 0 0 1 0 1 Ribosome 0.439100089346065 0.438719281794303 0.2045703 0 hPsi_site_10730 iPseU_CNN:0.2045703;iRNA_PseU:0 10731 chr2 160608961 160608961 1 + T G UCEC 160608960 + 160608940 160608980 41 AGAAGGTGACTTATGTAGAATTTGTCAAATGGCAGCTGCAT AGAAGGTGACTTATGTAGAATGTGTCAAATGGCAGCTGCAT < 41bp 0.8269012639671 0.495589852241101 0.25801778 0.31704628 prediction 0.653802527934201 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160608960 chr2:160608961 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5314 0 0 1 1 1 Cytosol 0.433138739400354 0.438729247923969 0 0 hPsi_site_10731 iPseU_CNN:0;iRNA_PseU:0 10732 chr1 159410333 159410333 1 + A G LUAD 159410332 + 159410312 159410352 41 TCACTGTGGTCATTGTCCACTACAGCTGTGCCTCCATTGCC TCACTGTGGTCATTGTCCACTGCAGCTGTGCCTCCATTGCC < 41bp 0.826891620056982 0.429013373631485 0.29716098 0.2327547 prediction 0.653783240113964 Functional Loss - OR10J1 ENSG00000196184 CDS Human protein_coding chr1:159410332 chr1:159410333 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_5315 0 0 0 0 0 unknown 0.438720252740326 0.438719375147572 0 0 hPsi_site_10732 iPseU_CNN:0;iRNA_PseU:0 10733 chr11 46681003 46681003 1 + A G HNSC 46681002 + 46680982 46681022 41 GAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTC GAAGACTCTCAAGAAGTGTGTGCCACCTCTTTTTCCACCTC < 41bp 0.910977261124095 0.584086508086268 0.8264164 0.48295903 prediction 0.653781506075654 Functional Loss - ATG13 ENSG00000175224 CDS Human protein_coding chr11:46681002 chr11:46681003 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_5316 0 0 1 0 2 Ribosome 0.438718572773712 0.43872072655436 0.6528328 0 hPsi_site_10733 iPseU_CNN:0.6528328;iRNA_PseU:0 10734 chrX 103295736 103295736 1 + A G rs782591108 103295735 + 103295715 103295755 41 CATGCCCTAGTGTACAGTGGTACAGCCAATGAGTGACCTGC CATGCCCTAGTGTACAGTGGTGCAGCCAATGAGTGACCTGC < 41bp 0.877826671485455 0.550939229686313 0.38835832 0.23670626 prediction 0.653774883598283 Functional Loss - H2BFM ENSG00000101812 UTR3 Human protein_coding chrX:103295735 chrX:103295736 . . 0 22 hPsi_associated_SNPs_5317 0 0 0 0 1 unknown 0.438717928825452 0.438707835378517 0 0 hPsi_site_10734 iPseU_CNN:0;iRNA_PseU:0 10735 chr2 44436387 44436387 1 + T G SKCM 44436386 + 44436366 44436406 41 GAGTATTGTACTAGTTTGCTTTTCAAATGCTCCCAAGGTCT GAGTATTGTACTAGTTTGCTTGTCAAATGCTCCCAAGGTCT < 41bp 0.830672674851775 0.50379997429799 0.7128501 0.32650143 prediction 0.65374540110757 Functional Loss - PPM1B ENSG00000138032 CDS Human protein_coding chr2:44436386 chr2:44436387 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5318 0 0 1 0 2 Ribosome 0.434729008224588 0.434324960566098 0.4257002 0 hPsi_site_10735 iPseU_CNN:0.4257002;iRNA_PseU:0 10736 chr14 20248562 20248562 1 + A G LUSC 20248561 + 20248541 20248581 41 TCGGGAGGTCCAACTAGTCCTATTTGTTATATTTCTATCCT TCGGGAGGTCCAACTAGTCCTGTTTGTTATATTTCTATCCT < 41bp 0.826864413100058 0.458973812689758 0.28818685 0.22075924 prediction 0.653728826200116 Functional Loss - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20248561 chr14:20248562 synonymous SNV . 0 22 hPsi_associated_SNPs_5319 0 0 0 0 0 unknown 0.438718580039594 0.438718584939395 0 0 hPsi_site_10736 iPseU_CNN:0;iRNA_PseU:0 10737 chr20 44512342 44512342 1 + A G COAD 44512341 + 44512321 44512361 41 AACATACAGATCCTGGAAGATACCCATAAGGTGCAGCCCCA AACATACAGATCCTGGAAGATGCCCATAAGGTGCAGCCCCA < 41bp 0.82685754310627 0.420172785422719 0.80336475 0.31848216 prediction 0.653715086212539 Functional Loss - ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44512341 chr20:44512342 nonsynonymous SNV 0.695 0 22 hPsi_associated_SNPs_5320 0 0 0 0 0 nucleus 0.438718584777671 0.438718552770095 0.6067295 0 hPsi_site_10737 iPseU_CNN:0.6067295;iRNA_PseU:0 10738 chr6 29408372 29408372 1 + A G UCEC 29408371 + 29408351 29408391 41 GTATGTGGAGACACCTCGCTTAATGAACTGCAGATTATCCT GTATGTGGAGACACCTCGCTTGATGAACTGCAGATTATCCT < 41bp 0.82682759944577 0.437257245043193 0.5580367 0.2966438 prediction 0.65365519889154 Functional Loss - OR10C1 ENSG00000206474 CDS Human protein_coding chr6:29408371 chr6:29408372 nonsynonymous SNV 0.949 1 22 hPsi_associated_SNPs_5321 0 0 0 0 0 unknown 0.438259966669206 0.43871860373667 0.1160734 0 hPsi_site_10738 iPseU_CNN:0.1160734;iRNA_PseU:0 10739 chr15 80429859 80429859 1 + A G STAD 80429858 + 80429838 80429878 41 TGGAAATGTTTACTGTGGTGTACACCGTTACTCAGATGTAC TGGAAATGTTTACTGTGGTGTGCACCGTTACTCAGATGTAC < 41bp 0.887712458449708 0.56093395698972 0.5033474 0.20486665 prediction 0.653557002919975 Functional Loss - ZFAND6 ENSG00000086666 CDS Human protein_coding chr15:80429858 chr15:80429859 synonymous SNV . 0 22 hPsi_associated_SNPs_5322 0 0 1 0 0 Cytosol 0.438806019724758 0.436035424744535 0.0066948 0 hPsi_site_10739 iPseU_CNN:0.0066948;iRNA_PseU:0 10740 chr15 80855466 80855466 1 + A G LAML 80855465 + 80855445 80855485 41 GCCAAGTCCTGTCGGTCATGTATCGATTTCGCACCAAGAAC GCCAAGTCCTGTCGGTCATGTGTCGATTTCGCACCAAGAAC < 41bp 0.826767440493649 0.404721378277872 0.7581791 0.28360522 prediction 0.653534880987298 Functional Loss - ARNT2 ENSG00000172379 CDS Human protein_coding chr15:80855465 chr15:80855466 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5323 0 0 0 0 1 Cytosol 0.439007727416069 0.437681854535183 0.5163582 0 hPsi_site_10740 iPseU_CNN:0.5163582;iRNA_PseU:0 10741 chr4 81188138 81188138 1 + A C rs33950145 81188137 + 81188117 81188157 41 AGACAGAGCAGCAGTAGCGCTATGTCTTCCTCTTCTGCCTC AGACAGAGCAGCAGTAGCGCTCTGTCTTCCTCTTCTGCCTC < 41bp 0.860350671330705 0.533584988184226 0.4782696 0.4441177 prediction 0.653531366292957 Functional Loss - FGF5 ENSG00000138675 CDS Human protein_coding chr4:81188137 chr4:81188138 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_5324 0 0 0 0 0 Nucleus 0.438718546355626 0.438726194158137 0 0 hPsi_site_10741 iPseU_CNN:0;iRNA_PseU:0 10742 chr7 143141402 143141402 1 + A G LUSC 143141401 + 143141381 143141421 41 GGGTGTGGGAGTCAGTGATTTATCTGTGTGCAGCAGTTCAC GGGTGTGGGAGTCAGTGATTTGTCTGTGTGCAGCAGTTCAC < 41bp 0.826754839424797 0.449475118820161 0.5797818 0.3333645 prediction 0.653509678849594 Functional Loss - TAS2R60 ENSG00000185899 CDS Human protein_coding chr7:143141401 chr7:143141402 nonsynonymous SNV 0.431 3 22 hPsi_associated_SNPs_5325 0 0 0 0 0 exosome 0.438790800589306 0.438758411979226 0.1595636 0 hPsi_site_10742 iPseU_CNN:0.1595636;iRNA_PseU:0 10743 chr5 140085217 140085217 1 + A G LGG 140085216 + 140085196 140085236 41 AGGAGGAAAAGGCCAAAGCGTACAAGAAAGAGAAACAGAAG AGGAGGAAAAGGCCAAAGCGTGCAAGAAAGAGAAACAGAAG < 41bp 0.826745680776222 0.448065832892271 0.8340547 0.2989344 prediction 0.653491361552445 Functional Loss - ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140085216 chr5:140085217 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_5326 0 0 1 0 1 Ribosome 0.43871859300964 0.438718594635536 0.6681094 0 hPsi_site_10743 iPseU_CNN:0.6681094;iRNA_PseU:0 10744 chr1 45276069 45276069 1 + A G UCEC 45276068 + 45276048 45276088 41 GCAGTGCTGGAGTTCCTATATACCAACAGTGTCAAGCTGTA GCAGTGCTGGAGTTCCTATATGCCAACAGTGTCAAGCTGTA < 41bp 0.896788547670931 0.570053933496041 0.32028997 0.27783763 prediction 0.65346922834978 Functional Loss - BTBD19 ENSG00000222009 CDS Human protein_coding chr1:45276068 chr1:45276069 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_5327 0 0 0 0 1 chromatin 0.43871859232221 0.438718590953942 0 0 hPsi_site_10744 iPseU_CNN:0;iRNA_PseU:0 10745 chr15 82563972 82563972 1 + A G rs138852049 82563971 + 82563951 82563991 41 TATTGTCCTTATGAAATAGTTAAACAGCCTCGCCATGTGCC TATTGTCCTTATGAAATAGTTGAACAGCCTCGCCATGTGCC < 41bp 0.883054906708017 0.556320978957155 0.39108133 0.22583044 prediction 0.653467855501725 Functional Loss - SAXO2 ENSG00000188659 CDS Human protein_coding chr15:82563971 chr15:82563972 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_5328 0 0 0 0 1 nucleus 0.438718586700448 0.438718593400915 0 0 hPsi_site_10745 iPseU_CNN:0;iRNA_PseU:0 10746 chr9 71555658 71555658 1 + A G UCEC 71555657 + 71555637 71555677 41 CAATTTCATCTTCTTCCTTATACGTCAATGAGCACTATCCA CAATTTCATCTTCTTCCTTATGCGTCAATGAGCACTATCCA < 41bp 0.826717624249959 0.423200029167999 0.37251198 0.27441692 prediction 0.653435248499917 Functional Loss - PIP5K1B ENSG00000107242 CDS Human protein_coding chr9:71555657 chr9:71555658 nonsynonymous SNV 0.516 0 22 hPsi_associated_SNPs_5329 0 0 0 0 2 Endoplasmic reticulum 0.437132519028829 0.437533706348142 0 0 hPsi_site_10746 iPseU_CNN:0;iRNA_PseU:0 10747 chr11 113803028 113803028 1 + A C rs1176744 113803027 + 113803007 113803047 41 ATAGTGTGGACATTGAAAGATACCCTGACCTTCCCTATGTT ATAGTGTGGACATTGAAAGATCCCCTGACCTTCCCTATGTT < 41bp 0.8564521113911 0.5297355393892 0.34931186 0.26047367 prediction 0.653433144003801 Functional Loss - HTR3B ENSG00000149305 CDS Human protein_coding chr11:113803027 chr11:113803028 nonsynonymous SNV 0.723 0 22 hPsi_associated_SNPs_5330 0 0 0 0 0 cytosol 0.438718593732528 0.438718593043587 0 0 hPsi_site_10747 iPseU_CNN:0;iRNA_PseU:0 10748 chr5 126771097 126771097 1 + A G COAD 126771096 + 126771076 126771116 41 AAAAACTGTGCAGGAATTTGTACCTGCACCAACAACGGAAC AAAAACTGTGCAGGAATTTGTGCCTGCACCAACAACGGAAC < 41bp 0.826698865581089 0.413493252668934 0.65901357 0.3099019 prediction 0.653397731162178 Functional Loss - MEGF10 ENSG00000145794 CDS Human protein_coding chr5:126771096 chr5:126771097 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5331 0 0 0 0 1 exosome 0.43832668408594 0.436934354944025 0.31802714 0 hPsi_site_10748 iPseU_CNN:0.31802714;iRNA_PseU:0 10749 chr13 33635306 33635306 1 + A G COAD 33635305 + 33635285 33635325 41 CGTATACAAGGAATATGACATACAGTGCTGGCCACAACCTT CGTATACAAGGAATATGACATGCAGTGCTGGCCACAACCTT < 41bp 0.826689769234742 0.410267434239309 0.6716415 0.34626567 prediction 0.653379538469483 Functional Loss - KL ENSG00000133116 CDS Human protein_coding chr13:33635305 chr13:33635306 nonsynonymous SNV 0.006 4 22 hPsi_associated_SNPs_5332 0 0 0 0 0 exosome 0.438717606822747 0.438718494141111 0.343283 0 hPsi_site_10749 iPseU_CNN:0.343283;iRNA_PseU:0 10750 chr6 43400551 43400551 1 + A G UCEC 43400550 + 43400530 43400570 41 CACGGCTGTGGAGGGCCTTGTATGGGGCCTTTGGACGGTGC CACGGCTGTGGAGGGCCTTGTGTGGGGCCTTTGGACGGTGC < 41bp 0.826672586694586 0.412190093183091 0.7318777 0.37658957 prediction 0.653345173389172 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43400550 chr6:43400551 nonsynonymous SNV 0.541 2 22 hPsi_associated_SNPs_5333 0 0 1 0 0 chromatin 0.438718583563886 0.438718573890896 0.4637554 0 hPsi_site_10750 iPseU_CNN:0.4637554;iRNA_PseU:0 10751 chr1 174418193 174418193 1 + T C STAD 174418194 - 174418174 174418214 41 CTGTTGGAGAGGCTGTATATTACACAGTTACAAAAACTATT CTGTTGGAGAGGCTGTATATTGCACAGTTACAAAAACTATT < 41bp 0.883911640326927 0.557247594099795 0.3281166 0.20998973 prediction 0.653328092454263 Functional Loss - GPR52 ENSG00000203737 CDS Human protein_coding chr1:174418194 chr1:174418193 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_5334 0 0 0 0 0 exosome 0.438718620679672 0.438718602655127 0 0 hPsi_site_10751 iPseU_CNN:0;iRNA_PseU:0 10752 chr11 4674358 4674358 1 + A C LGG 4674357 + 4674337 4674377 41 ATATCCGGGTCAATGTCGTCTATGGCCTTATCGTCATCATC ATATCCGGGTCAATGTCGTCTCTGGCCTTATCGTCATCATC < 41bp 0.860304363124716 0.533649553098736 0.47333488 0.2952779 prediction 0.65330962005196 Functional Loss - OR51E1 ENSG00000180785 CDS Human protein_coding chr11:4674357 chr11:4674358 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_5335 0 0 0 0 0 exosome 0.438624353188446 0.438717839959217 0 0 hPsi_site_10752 iPseU_CNN:0;iRNA_PseU:0 10753 chr1 153652147 153652147 1 + A G GBM 153652146 + 153652126 153652166 41 AAGCGCTCATGCTCTACGCCTACCGGCCGGGTGACGAAGAG AAGCGCTCATGCTCTACGCCTGCCGGCCGGGTGACGAAGAG < 41bp 0.826631350524143 0.420294538100521 0.53644556 0.26211625 prediction 0.653262701048287 Functional Loss - NPR1 ENSG00000169418 CDS Human protein_coding chr1:153652146 chr1:153652147 nonsynonymous SNV 0.848 1 22 hPsi_associated_SNPs_5336 0 0 0 0 0 Cytosol 0.438719620597651 0.438718166497778 0.07289112 0 hPsi_site_10753 iPseU_CNN:0.07289112;iRNA_PseU:0 10754 chr17 39394654 39394654 1 + A C rs577846147 39394653 + 39394633 39394673 41 TGTCTGCCTGCCTGGTTGCCTAAACCAGAGCTGTGGCTCCA TGTCTGCCTGCCTGGTTGCCTCAACCAGAGCTGTGGCTCCA < 41bp 0.826584579570602 0.482409229153445 0.32946163 0.2639557 prediction 0.653169159141204 Functional Loss - KRTAP9-8 ENSG00000187272 CDS Human protein_coding chr17:39394653 chr17:39394654 synonymous SNV . 0 22 hPsi_associated_SNPs_5337 0 0 0 0 0 unknown 0.439337645924697 0.442130215304022 0 0 hPsi_site_10754 iPseU_CNN:0;iRNA_PseU:0 10755 chr12 130855780 130855780 1 + A C UCEC 130855779 + 130855759 130855799 41 GTAGTGTTTCTCCCACACATTACAATGTCATCTATGACAAC GTAGTGTTTCTCCCACACATTCCAATGTCATCTATGACAAC < 41bp 0.82658110164551 0.464495629582722 0.3053643 0.30530939 prediction 0.653162203291021 Functional Loss - PIWIL1 ENSG00000125207 CDS Human protein_coding chr12:130855779 chr12:130855780 nonsynonymous SNV 0.877 4 22 hPsi_associated_SNPs_5338 0 0 0 0 2 Nucleus 0.437860605916388 0.438700279976139 0 0 hPsi_site_10755 iPseU_CNN:0;iRNA_PseU:0 10756 chr2 162274265 162274265 1 + T G COAD 162274264 + 162274244 162274284 41 CAATATTTTTGTGGATGTGATTTTGGCGGATCCCAATCACT CAATATTTTTGTGGATGTGATGTTGGCGGATCCCAATCACT < 41bp 0.832141169542253 0.505569536836968 0.6967655 0.28466743 prediction 0.653143265410571 Functional Loss - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162274264 chr2:162274265 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5339 0 0 0 0 1 exosome 0.438717828352934 0.438857478587769 0.393531 0 hPsi_site_10756 iPseU_CNN:0.393531;iRNA_PseU:0 10757 chr1 104117951 104117951 1 + A G STAD 104117950 + 104117930 104117970 41 GCTGGAGGAGCCTCTATTCTTACCTTCTGGGATGCTAGGTA GCTGGAGGAGCCTCTATTCTTGCCTTCTGGGATGCTAGGTA < 41bp 0.826565922644836 0.427876498956718 0.6400806 0.26593807 prediction 0.653131845289672 Functional Loss - AMY2B ENSG00000240038 CDS Human protein_coding chr1:104117950 chr1:104117951 nonsynonymous SNV 0.699 5 22 hPsi_associated_SNPs_5340 0 0 0 0 1 exosome 0.438720664333404 0.438718593340441 0.2801612 0 hPsi_site_10757 iPseU_CNN:0.2801612;iRNA_PseU:0 10758 chr10 43287151 43287151 1 + T G UCEC 43287150 + 43287130 43287170 41 AAATCCACAATCTGGGCCGTTTTATTACAGTTATGAAGTTT AAATCCACAATCTGGGCCGTTGTATTACAGTTATGAAGTTT < 41bp 0.829577547478962 0.503011912110896 0.31631345 0.3419538 prediction 0.653131270736131 Functional Loss - BMS1 ENSG00000165733 CDS Human protein_coding chr10:43287150 chr10:43287151 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_5341 0 0 1 0 1 chromatin 0.438718588704983 0.438720011848195 0 0 hPsi_site_10758 iPseU_CNN:0;iRNA_PseU:0 10759 chrX 151820139 151820139 1 + A C DLBC 151820138 + 151820118 151820158 41 TGGAGTATGTCTACATCAACTATCTTTTCTACAGTCGAGGA TGGAGTATGTCTACATCAACTCTCTTTTCTACAGTCGAGGA < 41bp 0.82656033867974 0.461514111144877 0.3111806 0.25318435 prediction 0.65312067735948 Functional Loss - GABRQ ENSG00000147402 CDS Human other chrX:151820138 chrX:151820139 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_5342 0 0 0 0 0 chromatin 0.438816025701543 0.438729124341571 0 0 hPsi_site_10759 iPseU_CNN:0;iRNA_PseU:0 10760 chr12 48172850 48172850 1 + A G LIHC 48172849 + 48172829 48172869 41 TCCTGGTGACGCACGTGATGTACATGCAAGATTATTGGAGG TCCTGGTGACGCACGTGATGTGCATGCAAGATTATTGGAGG < 41bp 0.903832978675017 0.57728993808552 0.69385374 0.2845405 prediction 0.653086081178994 Functional Loss - SLC48A1 ENSG00000211584 CDS Human protein_coding chr12:48172849 chr12:48172850 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_5343 0 0 1 0 1 Ribosome 0.438978984479086 0.438123320666628 0.38770748 0 hPsi_site_10760 iPseU_CNN:0.38770748;iRNA_PseU:0 10761 chr11 123900631 123900631 1 + A C STAD 123900630 + 123900610 123900650 41 ACAGCTGCATGGCTCAGCTCTATTTCTTTCACTTCCTAGGG ACAGCTGCATGGCTCAGCTCTCTTTCTTTCACTTCCTAGGG < 41bp 0.851740824233343 0.525201512895027 0.2905249 0.21205771 prediction 0.653078622676633 Functional Loss - OR10G8 ENSG00000234560 CDS Human protein_coding chr11:123900630 chr11:123900631 nonsynonymous SNV 0.771 3 22 hPsi_associated_SNPs_5344 0 0 0 0 0 unknown 0.438719388135272 0.438729276540031 0 0 hPsi_site_10761 iPseU_CNN:0;iRNA_PseU:0 10762 chr6 35254160 35254160 1 + A G UCEC 35254159 + 35254139 35254179 41 AGATGGCAGCATGGCTTACATACACCGCACACCCAGAGGTA AGATGGCAGCATGGCTTACATGCACCGCACACCCAGAGGTA < 41bp 0.897721156309642 0.571196172317735 0.82294893 0.23392755 prediction 0.653049967983815 Functional Loss - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35254159 chr6:35254160 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5345 0 0 1 0 2 Cytosol 0.4395249197563 0.438718893128922 0.64589786 0 hPsi_site_10762 iPseU_CNN:0.64589786;iRNA_PseU:0 10763 chr2 158157242 158157242 1 + A G UCEC 158157241 + 158157221 158157261 41 CCCTGCTCCCGAGTGGGCCATATATTCAGAAATGACAATCC CCCTGCTCCCGAGTGGGCCATGTATTCAGAAATGACAATCC < 41bp 0.826523954022459 0.420398103117655 0.25658435 0.14464712 prediction 0.653047908044919 Functional Loss - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158157241 chr2:158157242 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5346 0 0 1 2 1 Exosome 0.438730346719194 0.43871945448116 0 0 hPsi_site_10763 iPseU_CNN:0;iRNA_PseU:0 10764 chr12 52284848 52284848 1 + A G STAD 52284847 + 52284827 52284867 41 CCCCGTGGGTCTTCGTCCCCTACCAGAGCCCTCAGGGCATA CCCCGTGGGTCTTCGTCCCCTGCCAGAGCCCTCAGGGCATA < 41bp 0.856500986138479 0.529982788848593 0.54211956 0.2748509 prediction 0.653036394579774 Functional Loss - ANKRD33 ENSG00000167612 CDS Human protein_coding chr12:52284847 chr12:52284848 nonsynonymous SNV 0.793 1 22 hPsi_associated_SNPs_5347 0 0 0 1 0 unknown 0.438718576182926 0.438718592995699 0.0842391199999999 0 hPsi_site_10764 iPseU_CNN:0.0842391199999999;iRNA_PseU:0 Migraine 10765 chr16 769039 769039 1 + A G rs188118032 769038 + 769018 769058 41 CGTGGGCCGAGCAACCCCCTTACCTTTGGCACTTGCCCTGA CGTGGGCCGAGCAACCCCCTTGCCTTTGGCACTTGCCCTGA < 41bp 0.826498315498403 0.45488516419607 0.75780994 0.28987846 prediction 0.652996630996806 Functional Loss - METRN ENSG00000103260 UTR3 Human protein_coding chr16:769038 chr16:769039 . . 0 22 hPsi_associated_SNPs_5348 0 0 1 0 0 Cytosol 0.438718593487887 0.438718592997736 0.51561988 0 hPsi_site_10765 iPseU_CNN:0.51561988;iRNA_PseU:0 10766 chr11 6221244 6221244 1 + A G rs142946621 6221243 + 6221223 6221263 41 ACATACCTGGTCTCTTCTCCTACCTCACACACCGCTTTGGT ACATACCTGGTCTCTTCTCCTGCCTCACACACCGCTTTGGT < 41bp 0.87897891687253 0.552487056558691 0.65804654 0.2460235 prediction 0.652983720627679 Functional Loss - OR52W1 ENSG00000175485 CDS Human protein_coding chr11:6221243 chr11:6221244 nonsynonymous SNV 0.980 2 22 hPsi_associated_SNPs_5349 0 0 0 0 0 unknown 0.438691628390027 0.438032725596996 0.31609308 0 hPsi_site_10766 iPseU_CNN:0.31609308;iRNA_PseU:0 10767 chr3 151598579 151598579 1 + A G STAD 151598578 + 151598558 151598598 41 TCCCCATGCTGATAAGGAGTTATGCCAATGGAAACTGGATA TCCCCATGCTGATAAGGAGTTGTGCCAATGGAAACTGGATA < 41bp 0.826485471471365 0.422711147287549 0.29069215 0.20429826 prediction 0.65297094294273 Functional Loss - SUCNR1 ENSG00000198829 CDS Human protein_coding chr3:151598578 chr3:151598579 nonsynonymous SNV 0.137 4 22 hPsi_associated_SNPs_5350 0 0 0 0 0 exosome 0.438781469366342 0.438759892957237 0 0 hPsi_site_10767 iPseU_CNN:0;iRNA_PseU:0 10768 chr3 88188466 88188466 1 + A G UCEC 88188465 + 88188445 88188485 41 CCCAAGGCATCGTTGTATGTTATGTAACAAGGAATTTTTAG CCCAAGGCATCGTTGTATGTTGTGTAACAAGGAATTTTTAG < 41bp 0.87360217296386 0.547137283806167 0.33605635 0.32180175 prediction 0.652929778315385 Functional Loss - ZNF654 ENSG00000175105 CDS Human protein_coding chr3:88188465 chr3:88188466 synonymous SNV . 0 22 hPsi_associated_SNPs_5351 0 0 0 0 0 chromatin 0.438494975003371 0.438713091284612 0 0 hPsi_site_10768 iPseU_CNN:0;iRNA_PseU:0 10769 chr20 6751021 6751021 1 + A G HNSC 6751020 + 6751000 6751040 41 CCCCCTACATGCTAGACCTGTATCGCAGGCACTCAGGTCAG CCCCCTACATGCTAGACCTGTGTCGCAGGCACTCAGGTCAG < 41bp 0.826462999258551 0.406202366955112 0.8744954 0.5608807 prediction 0.652925998517101 Functional Loss - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6751020 chr20:6751021 nonsynonymous SNV 0.970 5 22 hPsi_associated_SNPs_5352 0 0 0 0 1 Ribosome 0.438718593118843 0.438718624894713 0.6272294 0 hPsi_site_10769 iPseU_CNN:0.6272294;iRNA_PseU:0 10770 chr1 110031648 110031648 1 + A G rs377046901 110031647 + 110031627 110031667 41 CCCCTCCTCAGTCCAGGTTGTAGCAGCGGTGGCTGCTCCCA CCCCTCCTCAGTCCAGGTTGTGGCAGCGGTGGCTGCTCCCA < 41bp 0.826457829865064 0.423287261821969 0.6638087 0.27932283 prediction 0.652915659730128 Functional Loss - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110031647 chr1:110031648 synonymous SNV . 0 22 hPsi_associated_SNPs_5353 0 0 0 0 1 nucleoplasm 0.438718591194277 0.438716627436408 0.3276174 0 hPsi_site_10770 iPseU_CNN:0.3276174;iRNA_PseU:0 10771 chr5 154394953 154394953 1 + A G rs200070580 154394952 + 154394932 154394972 41 AGCAGGTCTTCTGACGCTTTTACCACTCAGCATGCTCTCCA AGCAGGTCTTCTGACGCTTTTGCCACTCAGCATGCTCTCCA < 41bp 0.894514518412388 0.568068856057584 0.6142229 0.33823544 prediction 0.65289132470961 Functional Loss - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154394952 chr5:154394953 nonsynonymous SNV 0.837 0 22 hPsi_associated_SNPs_5354 0 0 0 0 0 exosome 0.438624559410616 0.438720252756072 0.2284458 0 hPsi_site_10771 iPseU_CNN:0.2284458;iRNA_PseU:0 10772 chr7 130025741 130025741 1 + A G LUAD 130025740 + 130025720 130025760 41 TCTACGGGACCAAGTTCAACTATGGCAGCATCATCAAGGCA TCTACGGGACCAAGTTCAACTGTGGCAGCATCATCAAGGCA < 41bp 0.826442001014066 0.420565036395243 0.74408 0.41378912 prediction 0.652884002028132 Functional Loss - CPA1 ENSG00000091704 CDS Human protein_coding chr7:130025740 chr7:130025741 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5355 0 0 0 0 1 Endoplasmic reticulum 0.438703137369767 0.438399648850247 0.48816 0 hPsi_site_10772 iPseU_CNN:0.48816;iRNA_PseU:0 10773 chr3 57302494 57302494 1 + T C STAD 57302495 - 57302475 57302515 41 CTTTTCAATCTGTTTTTGTTTATTGAGTTCTTTCTGTTGCT CTTTTCAATCTGTTTTTGTTTGTTGAGTTCTTTCTGTTGCT < 41bp 0.827080652053927 0.500645731287346 0.43971077 0.32148132 prediction 0.652869841533163 Functional Loss - APPL1 ENSG00000157500 CDS Human protein_coding chr3:57302495 chr3:57302494 synonymous SNV . 0 22 hPsi_associated_SNPs_5356 0 0 0 0 0 Cytosol 0.438707937671285 0.438803258831518 0 0 hPsi_site_10773 iPseU_CNN:0;iRNA_PseU:0 10774 chr16 67644809 67644809 1 + A G UCEC 67644808 + 67644788 67644828 41 AAGGAAAGGAGAGAAAGACTTACCAGAGACGCCGGGAAGGG AAGGAAAGGAGAGAAAGACTTGCCAGAGACGCCGGGAAGGG < 41bp 0.826422668442487 0.41805353740869 0.59845716 0.2777021 prediction 0.652845336884974 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67644808 chr16:67644809 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5357 0 0 1 0 1 Nucleus 0.438731987581539 0.438680789926641 0.19691432 0 hPsi_site_10774 iPseU_CNN:0.19691432;iRNA_PseU:0 10775 chr11 27016201 27016201 1 + A G UCEC 27016200 + 27016180 27016220 41 ACTTCGTGCCCGATGGGGACTATGAGGAGAACGATGACCCC ACTTCGTGCCCGATGGGGACTGTGAGGAGAACGATGACCCC < 41bp 0.826401248952219 0.423759157884779 0.68246245 0.3118614 prediction 0.652802497904438 Functional Loss - FIBIN ENSG00000176971 CDS Human protein_coding chr11:27016200 chr11:27016201 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5358 0 0 0 0 0 exosome 0.438718446438542 0.438718484336288 0.3649249 0 hPsi_site_10775 iPseU_CNN:0.3649249;iRNA_PseU:0 10776 chr2 198415599 198415599 1 + A G rs193156924 198415598 + 198415578 198415618 41 TAAGATTAGTATTATCTGTTTATAATGCCTGTTAATAAAAG TAAGATTAGTATTATCTGTTTGTAATGCCTGTTAATAAAAG < 41bp 0.826360893951904 0.469043652539828 0.31878138 0.25850993 prediction 0.652721787903808 Functional Loss - HSPE1-MOB4;MOB4 ENSG00000115540 UTR3 Human protein_coding chr2:198415598 chr2:198415599 . . 0 22 hPsi_associated_SNPs_5359 0 0 1 1 0 unknown 0.438717915856874 0.438678855908747 0 0 hPsi_site_10776 iPseU_CNN:0;iRNA_PseU:0 10777 chr3 149216533 149216533 1 + A G rs80009570 149216532 + 149216512 149216552 41 TTATCTCAATGATGAGGCCTTATGGAACAAGTGCCGAGAGC TTATCTCAATGATGAGGCCTTGTGGAACAAGTGCCGAGAGC < 41bp 0.888332629944062 0.56201501846591 0.32995933 0.25645778 prediction 0.652635222956304 Functional Loss - TM4SF4 ENSG00000169903 CDS Human protein_coding chr3:149216532 chr3:149216533 synonymous SNV . 0 22 hPsi_associated_SNPs_5360 0 0 0 0 1 exosome 0.438718468596548 0.438679214911801 0 0 hPsi_site_10777 iPseU_CNN:0;iRNA_PseU:0 10778 chr1 147091668 147091668 1 + A G UCEC 147091667 + 147091647 147091687 41 CCCTGGATTTGCAGGCATGATAAACTCTGAAATGGAAGGGC CCCTGGATTTGCAGGCATGATGAACTCTGAAATGGAAGGGC < 41bp 0.826317269826192 0.414883645124515 0.3814822 0.24875563 prediction 0.652634539652385 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091667 chr1:147091668 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_5361 0 0 1 0 0 Nucleus 0.438721804603784 0.438719978432081 0 0 hPsi_site_10778 iPseU_CNN:0;iRNA_PseU:0 10779 chr3 9506176 9506176 1 + T G rs147128913 9506175 + 9506155 9506195 41 GCAGAATGTCACCAAGTTACTTCGGCCTCTGTCTCCAGTCA GCAGAATGTCACCAAGTTACTGCGGCCTCTGTCTCCAGTCA < 41bp 0.840959701187362 0.514662933398636 0.2957414 0.2507345 prediction 0.652593535577452 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9506175 chr3:9506176 synonymous SNV . 0 22 hPsi_associated_SNPs_5362 0 0 1 0 1 Nucleus 0.438791944709552 0.441425317668188 0 0 hPsi_site_10779 iPseU_CNN:0;iRNA_PseU:0 10780 chr2 232081448 232081448 1 + A G COAD 232081447 + 232081427 232081467 41 CCACAGAGTTTCTTCCTTTCTATGCCCTTCCTTTTGTTCCC CCACAGAGTTTCTTCCTTTCTGTGCCCTTCCTTTTGTTCCC < 41bp 0.826296464958585 0.414577499868515 0.39450994 0.35017508 prediction 0.65259292991717 Functional Loss - ARMC9 ENSG00000135931 CDS Human protein_coding chr2:232081447 chr2:232081448 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_5363 0 0 1 0 2 membrane 0.438718592995102 0.438718592995102 0 0 hPsi_site_10780 iPseU_CNN:0;iRNA_PseU:0 10781 chr6 50805749 50805749 1 + T G UCEC 50805748 + 50805728 50805768 41 CTAGAAAAAATCGGTTTGAATTTACCCGCGGGCAGGCGCAA CTAGAAAAAATCGGTTTGAATGTACCCGCGGGCAGGCGCAA < 41bp 0.826262452137874 0.494839819810216 0.71041006 0.52501136 prediction 0.652524904275747 Functional Loss - TFAP2B ENSG00000008196 CDS Human protein_coding chr6:50805748 chr6:50805749 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5364 0 0 0 0 2 Endoplasmic reticulum 0.438718594203945 0.43871857739393 0.3707974 0 hPsi_site_10781 iPseU_CNN:0.3707974;iRNA_PseU:0 not specified not specified 10782 chr22 32779609 32779609 1 + A G rs56164445 32779608 + 32779588 32779628 41 ACGATGAGGGCTGAATTTCATATAATCTCAGCCTCTACTGG ACGATGAGGGCTGAATTTCATGTAATCTCAGCCTCTACTGG < 41bp 0.86302977267295 0.536797589531904 0.24154055 0.2192083 prediction 0.652464366282091 Functional Loss - LOC339666 ENSG00000230736 ncRNA_exonic Human lincRNA chr22:32779608 chr22:32779609 . . 0 22 hPsi_associated_SNPs_5365 0 0 0 0 0 unknown 0.438718587130877 0.438718481674674 0 0 hPsi_site_10782 iPseU_CNN:0;iRNA_PseU:0 Familial aortopathy Familial aortopathy 10783 chrX 23411710 23411710 1 + A G LGG 23411709 + 23411689 23411729 41 CCTTTGTATACATGGATCGATATGCCTCCTCTCTGGGAGCC CCTTTGTATACATGGATCGATGTGCCTCCTCTCTGGGAGCC < 41bp 0.826121394449211 0.419452713127854 0.36571723 0.21184933 prediction 0.652242788898422 Functional Loss - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23411709 chrX:23411710 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5366 0 0 0 0 0 exosome 0.438630110740626 0.438716802051562 0 0 hPsi_site_10783 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10784 chr5 140594897 140594897 1 + A G LUAD 140594896 + 140594876 140594916 41 TGAAATCCGCGGAAAACTTTTACACCCTACTAACGGAGAGA TGAAATCCGCGGAAAACTTTTGCACCCTACTAACGGAGAGA < 41bp 0.886359051370524 0.560277510262886 0.54464376 0.2466937 prediction 0.652163082215277 Functional Loss - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140594896 chr5:140594897 nonsynonymous SNV 0.018 3 22 hPsi_associated_SNPs_5367 0 0 0 0 0 exosome 0.438718592995103 0.438718593135665 0.0892875200000001 0 hPsi_site_10784 iPseU_CNN:0.0892875200000001;iRNA_PseU:0 10785 chr16 57254731 57254731 1 + A G LUAD 57254730 + 57254710 57254750 41 ATAGCAATGATGTCAGCGAGTACCTGAAGATCTCACCTCAT ATAGCAATGATGTCAGCGAGTGCCTGAAGATCTCACCTCAT < 41bp 0.826066176103086 0.409685187056798 0.68913394 0.2239309 prediction 0.652132352206171 Functional Loss - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57254730 chr16:57254731 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5368 0 0 1 0 2 Ribosome 0.438709428787926 0.438715943244152 0.37826788 0 hPsi_site_10785 iPseU_CNN:0.37826788;iRNA_PseU:0 10786 chr11 119206381 119206381 1 + A G LIHC 119206380 + 119206360 119206400 41 TCTGTGGAGGATGACGGACGTAGTGGCTGCCTTCCTAGCCC TCTGTGGAGGATGACGGACGTGGTGGCTGCCTTCCTAGCCC < 41bp 0.897205747570362 0.571144358976944 0.54013616 0.30986735 prediction 0.652122777186835 Functional Loss - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206380 chr11:119206381 synonymous SNV . 0 22 hPsi_associated_SNPs_5369 0 0 1 0 0 chromatin 0.43872477882529 0.438718599351782 0.08027232 0 hPsi_site_10786 iPseU_CNN:0.08027232;iRNA_PseU:0 10787 chr8 27534178 27534178 1 + A G rs76548566 27534177 + 27534157 27534197 41 AATTTGAAAATGAATTTGTTTACTATCCTTAATGGTAAGCA AATTTGAAAATGAATTTGTTTGCTATCCTTAATGGTAAGCA < 41bp 0.860791144822003 0.534743203321337 0.43504363 0.3053757 prediction 0.652095883001333 Functional Loss - SCARA3 ENSG00000168077 UTR3 Human protein_coding chr8:27534177 chr8:27534178 . . 0 22 hPsi_associated_SNPs_5370 0 0 0 5 1 Cytosol 0.438674357400061 0.43861450411786 0 0 hPsi_site_10787 iPseU_CNN:0;iRNA_PseU:0 10788 chr19 36595436 36595436 1 + A C rs1008328 36595435 + 36595415 36595455 41 CCCAGGTGCACTTGGTCTGTTACAGGGCAGCCCTGCCCGCT CCCAGGTGCACTTGGTCTGTTCCAGGGCAGCCCTGCCCGCT < 41bp 0.826039657738166 0.464634721484049 0.73158973 0.33416015 prediction 0.652079315476333 Functional Loss - WDR62 ENSG00000075702 CDS Human protein_coding chr19:36595435 chr19:36595436 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5371 2 0 0 0 1 Nucleus 0.438716826427824 0.438718578931725 0.46317946 0 hPsi_site_10788 iPseU_CNN:0.46317946;iRNA_PseU:0 10789 chr1 10207095 10207095 1 + T G UCEC 10207094 + 10207074 10207114 41 CCTGAGAAGATGTCTGAATTTTTATGGCCTTCTCATTCAGC CCTGAGAAGATGTCTGAATTTGTATGGCCTTCTCATTCAGC < 41bp 0.826026536640357 0.495426730319443 0.5616394 0.29432493 prediction 0.652053073280714 Functional Loss - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10207094 chr1:10207095 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5372 0 0 1 0 2 Cytosol 0.438718545440576 0.438724325302655 0.1232788 0 hPsi_site_10789 iPseU_CNN:0.1232788;iRNA_PseU:0 10790 chr1 166816793 166816793 1 + T G UCEC 166816792 + 166816772 166816812 41 GGGGAGGAGGAGTCTCAGAATTCTGACGAGTGGCAGCTCCA GGGGAGGAGGAGTCTCAGAATGCTGACGAGTGGCAGCTCCA < 41bp 0.826010427315384 0.494550972487038 0.48346847 0.2762411 prediction 0.652020854630768 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166816792 chr1:166816793 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5373 0 0 1 0 2 Nucleus 0.438718659329403 0.438718638203594 0 0 hPsi_site_10790 iPseU_CNN:0;iRNA_PseU:0 10791 chr11 61541543 61541543 1 + A G UCEC 61541542 + 61541522 61541562 41 ACCACTTCCAGGTGACAGTGTACATCGGCATGCTGGGCGAG ACCACTTCCAGGTGACAGTGTGCATCGGCATGCTGGGCGAG < 41bp 0.825992420478274 0.39682471594059 0.6134997 0.2575561 prediction 0.651984840956549 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61541542 chr11:61541543 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5374 0 0 1 0 0 chromatin 0.438804246358798 0.435875684484859 0.2269994 0 hPsi_site_10791 iPseU_CNN:0.2269994;iRNA_PseU:0 10792 chr1 179064151 179064151 1 + A G UCEC 179064150 + 179064130 179064170 41 TGAAGGAAAACCTGATTGACTACTTCATCCCCTTCCTGCCT TGAAGGAAAACCTGATTGACTGCTTCATCCCCTTCCTGCCT < 41bp 0.890026488760198 0.564035365229273 0.65742147 0.2828151 prediction 0.65198224706185 Functional Loss - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179064150 chr1:179064151 nonsynonymous SNV 0.107 1 22 hPsi_associated_SNPs_5375 0 0 1 0 1 Ribosome 0.438718582693386 0.438718582493745 0.31484294 0 hPsi_site_10792 iPseU_CNN:0.31484294;iRNA_PseU:0 10793 chr22 45258495 45258495 1 + A C rs8777 45258494 + 45258474 45258514 41 AGTGTTGCGAACACTCTGTATATTTCGAGCTACCTCCCACA AGTGTTGCGAACACTCTGTATCTTTCGAGCTACCTCCCACA < 41bp 0.825990501501396 0.481192394432407 0.8162471 0.7579643 prediction 0.651981003002791 Functional Loss - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258494 chr22:45258495 . . 0 22 hPsi_associated_SNPs_5376 0 0 0 22 0 unknown 0.439558769779307 0.438451002317353 0.1165656 0 hPsi_site_10793 iPseU_CNN:0.1165656;iRNA_PseU:0 10794 chr17 27049757 27049757 1 + A G LIHC 27049756 + 27049736 27049776 41 CCCAGGCTTGACCACTATGCTATCATCAAGTTTCCGCTGAC CCCAGGCTTGACCACTATGCTGTCATCAAGTTTCCGCTGAC < 41bp 0.905071510918146 0.57908904043151 0.5853041 0.29712886 prediction 0.651964940973272 Functional Loss - RPL23A ENSG00000198242 CDS Human protein_coding chr17:27049756 chr17:27049757 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_5377 0 0 1 0 1 Cytosol 0.438737475825184 0.438784476331942 0.1706082 0 hPsi_site_10794 iPseU_CNN:0.1706082;iRNA_PseU:0 Primary pulmonary hypertension Primary pulmonary hypertension 10795 chr14 20215637 20215637 1 + A G rs28652816 20215636 + 20215616 20215656 41 AGAATTTGTTCTTCTGGGCCTATCATCTTCTTGGGAGCTGC AGAATTTGTTCTTCTGGGCCTGTCATCTTCTTGGGAGCTGC < 41bp 0.867337933957289 0.541359905168939 0.44027737 0.28216887 prediction 0.6519560575767 Functional Loss - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20215636 chr14:20215637 synonymous SNV . 0 22 hPsi_associated_SNPs_5378 0 0 0 0 0 unknown 0.438718829733797 0.438736208380839 0 0 hPsi_site_10795 iPseU_CNN:0;iRNA_PseU:0 10796 chr4 2515662 2515662 1 + A G rs548583190 2515661 + 2515641 2515681 41 GTTTCGAAACCAACATCTGATATGTAAACTGCTCTTTTGTT GTTTCGAAACCAACATCTGATGTGTAAACTGCTCTTTTGTT < 41bp 0.825950966331195 0.451180345019265 0.41274714 0.24485153 prediction 0.65190193266239 Functional Loss - RNF4 ENSG00000063978 UTR3 Human protein_coding chr4:2515661 chr4:2515662 . . 0 22 hPsi_associated_SNPs_5379 0 0 1 4 0 Ribosome 0.436046867694399 0.438393575210404 0 0 hPsi_site_10796 iPseU_CNN:0;iRNA_PseU:0 10797 chr3 186502807 186502807 1 + A G STAD 186502806 + 186502786 186502826 41 GGCAAGACAGCCACATTTGCTATTTCCATCCTGCAACAGTT GGCAAGACAGCCACATTTGCTGTTTCCATCCTGCAACAGTT < 41bp 0.889651444650977 0.563709799322466 0.39455295 0.2721267 prediction 0.651883290657022 Functional Loss - EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186502806 chr3:186502807 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5380 0 0 1 0 1 Nucleus 0.438718589963826 0.438718586856268 0 0 hPsi_site_10797 iPseU_CNN:0;iRNA_PseU:0 10798 chr3 151599161 151599161 1 + A G STAD 151599160 + 151599140 151599180 41 AGGTCGTCATCAACTCCTTTTACATTGTGACACGGCCTTTG AGGTCGTCATCAACTCCTTTTGCATTGTGACACGGCCTTTG < 41bp 0.900273035886117 0.574343280540666 0.29333672 0.25790113 prediction 0.651859510690902 Functional Loss - SUCNR1 ENSG00000198829 CDS Human protein_coding chr3:151599160 chr3:151599161 nonsynonymous SNV 0.008 3 22 hPsi_associated_SNPs_5381 0 0 0 0 0 exosome 0.438834440004985 0.438713507985648 0 0 hPsi_site_10798 iPseU_CNN:0;iRNA_PseU:0 10799 chrX 56591402 56591402 1 + A G UCEC 56591401 + 56591381 56591421 41 TATGTCGCCAGCATCTTTAGTACCCCAGGCATGCAGAGCCT TATGTCGCCAGCATCTTTAGTGCCCCAGGCATGCAGAGCCT < 41bp 0.82587004549275 0.419102653286667 0.3924879 0.1932647 prediction 0.6517400909855 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591401 chrX:56591402 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5382 0 0 1 0 0 nucleus 0.438397878907544 0.438345419244404 0 0 hPsi_site_10799 iPseU_CNN:0;iRNA_PseU:0 10800 chr19 41086559 41086559 1 + A G LUAD 41086558 + 41086538 41086578 41 ATACCCAGTTTCTAGTCTGCTACAGGTGCTTGGGGAGGGAG ATACCCAGTTTCTAGTCTGCTGCAGGTGCTTGGGGAGGGAG < 41bp 0.825859000944291 0.415963665084099 0.46473986 0.32062376 prediction 0.651718001888582 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41086558 chr19:41086559 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_5383 0 0 0 0 2 Ribosome 0.438724236654244 0.438718317845104 0 0 hPsi_site_10800 iPseU_CNN:0;iRNA_PseU:0 10801 chr1 78395050 78395050 1 + A G COAD 78395049 + 78395029 78395069 41 CAGCAAAAATTTTTAAAGGGTACCGCCCTGGTAAACTCAAA CAGCAAAAATTTTTAAAGGGTGCCGCCCTGGTAAACTCAAA < 41bp 0.825842178019036 0.421664013966602 0.43981296 0.23187923 prediction 0.651684356038071 Functional Loss - NEXN ENSG00000162614 CDS Human protein_coding chr1:78395049 chr1:78395050 nonsynonymous SNV 0.390 1 22 hPsi_associated_SNPs_5384 0 0 1 0 1 nucleoplasm 0.438718592992103 0.438718592993927 0 0 hPsi_site_10801 iPseU_CNN:0;iRNA_PseU:0 10802 chr10 121189910 121189910 1 + T G UCEC 121189909 + 121189889 121189929 41 AACCGGTGACCAAAAACACTTTCAGGCAGTATCGAGTGCTA AACCGGTGACCAAAAACACTTGCAGGCAGTATCGAGTGCTA < 41bp 0.825799142748919 0.486373944864589 0.31220105 0.12645182 prediction 0.651598285497837 Functional Loss - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121189909 chr10:121189910 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5385 0 0 1 0 2 Cytosol 0.438705344467401 0.438550923033199 0 0 hPsi_site_10802 iPseU_CNN:0;iRNA_PseU:0 not provided not provided 10803 chr6 41029285 41029285 1 + A G UCEC 41029284 + 41029264 41029304 41 CCTTCGACCCAGCCCTGCGGTACAATGTCACCTGGTATGTG CCTTCGACCCAGCCCTGCGGTGCAATGTCACCTGGTATGTG < 41bp 0.911986097028038 0.586190890400087 0.5672458 0.381241 prediction 0.651590413255902 Functional Loss - APOBEC2 ENSG00000124701 CDS Human protein_coding chr6:41029284 chr6:41029285 nonsynonymous SNV 0.899 2 22 hPsi_associated_SNPs_5386 0 0 0 1 1 chromatin 0.438718584945272 0.438718597334142 0.1344916 0 hPsi_site_10803 iPseU_CNN:0.1344916;iRNA_PseU:0 10804 chr7 106836328 106836328 1 + A G HNSC 106836327 + 106836307 106836347 41 GCAGTTTATGTGTTAAGTAGTATGGCTCGCCAGCGTCGTGC GCAGTTTATGTGTTAAGTAGTGTGGCTCGCCAGCGTCGTGC < 41bp 0.825784788955606 0.407028541536486 0.46822435 0.38046354 prediction 0.651569577911211 Functional Loss - HBP1 ENSG00000105856 CDS Human protein_coding chr7:106836327 chr7:106836328 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5387 0 0 1 0 1 Ribosome 0.438718623665503 0.438718596196312 0 0 hPsi_site_10804 iPseU_CNN:0;iRNA_PseU:0 10805 chr6 118880223 118880223 1 + A G LUSC 118880222 + 118880202 118880242 41 ATATGTCTCTTGCTGATCTGTATCATCGTGATGCTTCTCTG ATATGTCTCTTGCTGATCTGTGTCATCGTGATGCTTCTCTG < 41bp 0.82578402915553 0.45542701211567 0.40007666 0.21723247 prediction 0.651568058311061 Functional Loss - PLN ENSG00000198523 CDS Human protein_coding chr6:118880222 chr6:118880223 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5388 0 0 0 0 0 Cytosol 0.43302762802382 0.437870338999574 0 0 hPsi_site_10805 iPseU_CNN:0;iRNA_PseU:0 10806 chr12 109540689 109540689 1 + T G rs199547586 109540688 + 109540668 109540708 41 GTCTACAGACATAGAGGATTTTGTTCATCCTGGCCATGGAG GTCTACAGACATAGAGGATTTGGTTCATCCTGGCCATGGAG < 41bp 0.832961272601293 0.507182374280447 0.3567539 0.24886858 prediction 0.651557796641692 Functional Loss - UNG ENSG00000076248 CDS Human protein_coding chr12:109540688 chr12:109540689 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_5389 0 0 1 0 2 Ribosome 0.438718595947567 0.438718592987101 0 0 hPsi_site_10806 iPseU_CNN:0;iRNA_PseU:0 10807 chr12 101018492 101018492 1 + A G LUSC 101018491 + 101018471 101018511 41 AAGTCAGCACAGACTGTCGCTAAGAGCCAGCATTCAACTAA AAGTCAGCACAGACTGTCGCTGAGAGCCAGCATTCAACTAA < 41bp 0.825723160145431 0.42539605799729 0.33769488 0.20527601 prediction 0.651446320290862 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101018491 chr12:101018492 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_5390 0 0 0 0 0 Cytosol 0.425282813392353 0.433253320523466 0 0 hPsi_site_10807 iPseU_CNN:0;iRNA_PseU:0 10808 chr6 116879088 116879088 1 + A G LUSC 116879087 + 116879067 116879107 41 TCACCTCTCTGCAACATTGCTACTGGACCAGCCACCTCCAG TCACCTCTCTGCAACATTGCTGCTGGACCAGCCACCTCCAG < 41bp 0.825708966044993 0.423863646544545 0.7055703 0.30502406 prediction 0.651417932089986 Functional Loss - FAM26D ENSG00000164451 CDS Human protein_coding chr6:116879087 chr6:116879088 nonsynonymous SNV 0.936 4 22 hPsi_associated_SNPs_5391 0 0 0 0 0 nucleus 0.438718838509548 0.438718710600039 0.4111406 0 hPsi_site_10808 iPseU_CNN:0.4111406;iRNA_PseU:0 10809 chr1 152882474 152882474 1 + A G STAD 152882473 + 152882453 152882493 41 GGAAAAGCACATGACTGCTGTAAAGGGACTGCCTGAGCAAG GGAAAAGCACATGACTGCTGTGAAGGGACTGCCTGAGCAAG < 41bp 0.82567972836592 0.421370862065072 0.40270334 0.21147466 prediction 0.651359456731841 Functional Loss - IVL ENSG00000163207 CDS Human protein_coding chr1:152882473 chr1:152882474 synonymous SNV . 0 22 hPsi_associated_SNPs_5392 0 0 0 0 0 unknown 0.438712669977294 0.43869995349857 0 0 hPsi_site_10809 iPseU_CNN:0;iRNA_PseU:0 10810 chr11 43364101 43364101 1 + A G ESCA 43364100 + 43364080 43364120 41 CAGCATTGTCATGAGCTTAATATACTTAAATTCTACTACTC CAGCATTGTCATGAGCTTAATGTACTTAAATTCTACTACTC < 41bp 0.825674557081489 0.441908070408865 0.2419711 0.22227731 prediction 0.651349114162979 Functional Loss - API5 ENSG00000166181 CDS Human protein_coding chr11:43364100 chr11:43364101 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_5393 0 0 1 1 0 Ribosome 0.438451804878452 0.438836180153552 0 0 hPsi_site_10810 iPseU_CNN:0;iRNA_PseU:0 10811 chr1 57341846 57341846 1 + A G LUSC 57341845 + 57341825 57341865 41 TTGACGAAGACTGCAGCCAGTATGAACCAATTCCAGGATCA TTGACGAAGACTGCAGCCAGTGTGAACCAATTCCAGGATCA < 41bp 0.825657181014145 0.413030688402761 0.80829954 0.53823334 prediction 0.65131436202829 Functional Loss - C8A ENSG00000157131 CDS Human protein_coding chr1:57341845 chr1:57341846 nonsynonymous SNV 0.244 2 22 hPsi_associated_SNPs_5394 0 0 0 0 1 cytosol 0.43871883812847 0.438718664349588 0.5401324 0 hPsi_site_10811 iPseU_CNN:0.5401324;iRNA_PseU:0 10812 chr9 107266938 107266938 1 + A G UCEC 107266937 + 107266917 107266957 41 CCATCTGCAACCCCCTGAGATACCCTGTCATCATGAATAGG CCATCTGCAACCCCCTGAGATGCCCTGTCATCATGAATAGG < 41bp 0.892305432156371 0.566652646398707 0.4664848 0.27235758 prediction 0.651305571515327 Functional Loss - OR13F1 ENSG00000186881 CDS Human protein_coding chr9:107266937 chr9:107266938 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_5395 0 0 0 0 0 unknown 0.438718592569946 0.438718526722638 0 0 hPsi_site_10812 iPseU_CNN:0;iRNA_PseU:0 10813 chr9 19049667 19049667 1 + A G LUAD 19049666 + 19049646 19049686 41 CCCCGGCGGGTGATGCCAAATACAGCCATGAAGAAAAAGGT CCCCGGCGGGTGATGCCAAATGCAGCCATGAAGAAAAAGGT < 41bp 0.825642117830297 0.446901528675601 0.27386212 0.23161334 prediction 0.651284235660595 Functional Loss - RRAGA ENSG00000155876 CDS Human protein_coding chr9:19049666 chr9:19049667 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_5396 0 0 1 0 0 Ribosome 0.438718592995164 0.438718592995102 0 0 hPsi_site_10813 iPseU_CNN:0;iRNA_PseU:0 10814 chr22 21991157 21991157 1 + A G UCEC 21991156 + 21991136 21991176 41 CAGAGCCCTGCCGCTCCCTCTACACCAACTTGCCAGCCAGC CAGAGCCCTGCCGCTCCCTCTGCACCAACTTGCCAGCCAGC < 41bp 0.825630250611961 0.42046763956065 0.3723222 0.20307088 prediction 0.651260501223922 Functional Loss - CCDC116 ENSG00000161180 CDS Human protein_coding chr22:21991156 chr22:21991157 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5397 0 0 0 0 0 nucleolus 0.438703135122093 0.438178647946357 0 0 hPsi_site_10814 iPseU_CNN:0;iRNA_PseU:0 10815 chrX 103044313 103044313 1 + A G COAD 103044312 + 103044292 103044332 41 GCATTTGTGGGGGCTGCAGCTACACTGGTTTCCCTGGTGAG GCATTTGTGGGGGCTGCAGCTGCACTGGTTTCCCTGGTGAG < 41bp 0.825630153114635 0.411732932665741 0.4501962 0.33095032 prediction 0.65126030622927 Functional Loss - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103044312 chrX:103044313 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_5398 0 0 1 0 2 Endoplasmic reticulum 0.438711451992125 0.4388366107246 0 0 hPsi_site_10815 iPseU_CNN:0;iRNA_PseU:0 Heterotaxy syndrome Heterotaxy syndrome 10816 chr2 15770152 15770152 1 + T G UCEC 15770151 + 15770131 15770171 41 AGAACACCTGAACTGTACCATTTCTCAGGTTGAGCCGGATA AGAACACCTGAACTGTACCATGTCTCAGGTTGAGCCGGATA < 41bp 0.825613142839063 0.495638281171482 0.58876014 0.5950195 prediction 0.651226285678127 Functional Loss - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770151 chr2:15770152 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_5399 0 0 1 0 2 Cytosol 0.438718597419003 0.438719166122177 0 0 hPsi_site_10816 iPseU_CNN:0;iRNA_PseU:0 10817 chr14 105945789 105945789 1 + A G STAD 105945788 + 105945768 105945808 41 CCCAGCACGACGGCCAGCCCTACTGCCACAAGCCCTGCTAT CCCAGCACGACGGCCAGCCCTGCTGCCACAAGCCCTGCTAT < 41bp 0.825582307075717 0.429835652865321 0.32093516 0.19223455 prediction 0.651164614151435 Functional Loss - CRIP2 ENSG00000182809 CDS Human protein_coding chr14:105945788 chr14:105945789 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5400 0 0 1 0 1 Ribosome 0.438722299055946 0.438718663539114 0 0 hPsi_site_10817 iPseU_CNN:0;iRNA_PseU:0 10818 chr19 41111094 41111094 1 + A G COAD 41111093 + 41111073 41111113 41 CAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAAC CAGGCCTCACCCGCTCCGTGTGCACTATGCCACTGGCCAAC < 41bp 0.825548308533084 0.414529729698643 0.8913245 0.51864165 prediction 0.651096617066168 Functional Loss - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41111093 chr19:41111094 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_5401 0 0 0 0 1 Cytosol 0.43863980543014 0.438680375616387 0.7453657 0 hPsi_site_10818 iPseU_CNN:0.7453657;iRNA_PseU:0 10819 chr9 140136267 140136267 1 + A G STAD 140136266 + 140136246 140136286 41 TGGAACGCATCAACGTGTACTACAATGAGGCCACCGGTGAG TGGAACGCATCAACGTGTACTGCAATGAGGCCACCGGTGAG < 41bp 0.825542020393691 0.428799750963387 0.7623027 0.37608147 prediction 0.651084040787382 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140136266 chr9:140136267 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5402 0 0 1 0 2 Cytosol 0.439237957908993 0.436663342635945 0.5246054 0 hPsi_site_10819 iPseU_CNN:0.5246054;iRNA_PseU:0 10820 chr9 36657327 36657327 1 + A G COAD 36657326 + 36657306 36657346 41 TGATTGGTGTGAAGATGATTTATCAACAGGTGCTGCTACTC TGATTGGTGTGAAGATGATTTGTCAACAGGTGCTGCTACTC < 41bp 0.892352773513581 0.566816067392012 0.5038886 0.31532466 prediction 0.651073412243137 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36657326 chr9:36657327 synonymous SNV . 0 22 hPsi_associated_SNPs_5403 0 0 1 0 2 chromatin 0.433572324079459 0.436552081945735 0.00777720000000004 0 hPsi_site_10820 iPseU_CNN:0.00777720000000004;iRNA_PseU:0 10821 chr5 7773148 7773148 1 + A G COAD 7773147 + 7773127 7773167 41 TGATGGTGGCCTTGGTGGGCTACAACACCATCCTACTCCAC TGATGGTGGCCTTGGTGGGCTGCAACACCATCCTACTCCAC < 41bp 0.898651560223582 0.573138587566687 0.61476815 0.32932812 prediction 0.651025945313791 Functional Loss - ADCY2 ENSG00000078295 CDS Human protein_coding chr5:7773147 chr5:7773148 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5404 0 0 0 0 1 exosome 0.438718617778154 0.438719430244673 0.2295363 0 hPsi_site_10821 iPseU_CNN:0.2295363;iRNA_PseU:0 10822 chr6 132859820 132859820 1 + A G UCEC 132859819 + 132859799 132859839 41 GCTGTATCTCTGTTGATAGATACATTGCTGTTACTGATCCT GCTGTATCTCTGTTGATAGATGCATTGCTGTTACTGATCCT < 41bp 0.825509576163987 0.482793668216362 0.43879595 0.28730887 prediction 0.651019152327974 Functional Loss - TAAR9 ENSG00000237110 CDS Human protein_coding chr6:132859819 chr6:132859820 unknown 0.800 2 22 hPsi_associated_SNPs_5405 0 0 0 0 0 unknown 0.438720544994624 0.437877107614744 0 0 hPsi_site_10822 iPseU_CNN:0;iRNA_PseU:0 10823 chr8 145584626 145584626 1 + A G BRCA 145584625 + 145584605 145584645 41 TGTTCCCCCCGACCAGCATCTATCACGTGTTCCACAGCAGA TGTTCCCCCCGACCAGCATCTGTCACGTGTTCCACAGCAGA < 41bp 0.891782462324207 0.566278422484424 0.6027851 0.29989874 prediction 0.651008079679566 Functional Loss - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145584625 chr8:145584626 nonsynonymous SNV 0.504 2 22 hPsi_associated_SNPs_5406 0 0 1 0 0 Ribosome 0.43871859065037 0.438718768980866 0.2055702 0 hPsi_site_10823 iPseU_CNN:0.2055702;iRNA_PseU:0 10824 chr16 3350322 3350322 1 + A G UCEC 3350321 + 3350301 3350341 41 GCCTGAAGCTCCACGCCTCTTACCGGAACACCGGCTGAGCG GCCTGAAGCTCCACGCCTCTTGCCGGAACACCGGCTGAGCG < 41bp 0.889507203218878 0.564005720756235 0.5814513 0.27733988 prediction 0.651002964925285 Functional Loss - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3350321 chr16:3350322 nonsynonymous SNV 0.798 1 22 hPsi_associated_SNPs_5407 0 0 0 0 0 exosome 0.438428251315269 0.438698715978348 0.1629026 0 hPsi_site_10824 iPseU_CNN:0.1629026;iRNA_PseU:0 10825 chr1 196648779 196648779 1 + A G HNSC 196648778 + 196648758 196648798 41 TCATGCAAATCCCCAGATGTTATAAATGGATCTCCTATATC TCATGCAAATCCCCAGATGTTGTAAATGGATCTCCTATATC < 41bp 0.825493279099197 0.430072775997148 0.6063584 0.27088147 prediction 0.650986558198395 Functional Loss - CFH ENSG00000000971 CDS Human protein_coding chr1:196648778 chr1:196648779 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5408 0 0 1 0 1 chromatin 0.43871859422273 0.438718592037701 0.2127168 0 hPsi_site_10825 iPseU_CNN:0.2127168;iRNA_PseU:0 10826 chr18 51820396 51820396 1 + A G LUSC 51820395 + 51820375 51820415 41 TTTATCCAGTAGCAAACAGGTATCCTCTGTATCTCCTTGTG TTTATCCAGTAGCAAACAGGTGTCCTCTGTATCTCCTTGTG < 41bp 0.825488544637119 0.425371183314795 0.80965626 0.6347573 prediction 0.650977089274239 Functional Loss - POLI ENSG00000101751 CDS Human protein_coding chr18:51820395 chr18:51820396 synonymous SNV . 0 22 hPsi_associated_SNPs_5409 0 0 0 0 0 Nucleus 0.438712879289957 0.438716848728919 0.34979792 0 hPsi_site_10826 iPseU_CNN:0.34979792;iRNA_PseU:0 10827 chr22 18571766 18571766 1 + A G rs115277831 18571765 + 18571745 18571785 41 TTACAGCTCTTATCGCTGGGTAAAGTGATCTTGCCTGGTGC TTACAGCTCTTATCGCTGGGTGAAGTGATCTTGCCTGGTGC < 41bp 0.825488470463647 0.440184356319041 0.54706097 0.26326296 prediction 0.650976940927293 Functional Loss - PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18571765 chr22:18571766 . . 0 22 hPsi_associated_SNPs_5410 1 0 1 1 0 Ribosome 0.438723704517574 0.438549372797498 0.09412194 0 hPsi_site_10827 iPseU_CNN:0.09412194;iRNA_PseU:0 10828 chr7 1628035 1628035 1 + A G rs147832790 1628034 + 1628014 1628054 41 TTAGGATGAGGAATCTGGTTTATGTGACTCTGGGGGCTGAG TTAGGATGAGGAATCTGGTTTGTGTGACTCTGGGGGCTGAG < 41bp 0.879860321386724 0.554384087768414 0.57157564 0.54731095 prediction 0.650952467236619 Functional Loss - PSMG3-AS1 ENSG00000230487 ncRNA_exonic Human lincRNA chr7:1628034 chr7:1628035 . . 0 22 hPsi_associated_SNPs_5411 0 0 0 0 0 unknown 0.438736146421778 0.438698254687454 0.0485293800000002 0 hPsi_site_10828 iPseU_CNN:0.0485293800000002;iRNA_PseU:0 10829 chr4 1218796 1218796 1 + A G rs900021 1218795 + 1218775 1218815 41 TGTGACATCCGTGTGTTATCTATGTGCCCATGAAGCCCATG TGTGACATCCGTGTGTTATCTGTGTGCCCATGAAGCCCATG < 41bp 0.825448483780995 0.462557073631405 0.47612754 0.2940556 prediction 0.65089696756199 Functional Loss - CTBP1 ENSG00000159692 intronic Human protein_coding chr4:1218795 chr4:1218796 . . 0 22 hPsi_associated_SNPs_5412 0 0 0 0 0 Ribosome 0.437337005103416 0.43797829372276 0 0 hPsi_site_10829 iPseU_CNN:0;iRNA_PseU:0 10830 chr12 7150281 7150281 1 + A G rs7300544 7150280 + 7150260 7150300 41 CCTAGGCTCCTCCTGGCTGTTACACTTTCTCAGACCTTCCT CCTAGGCTCCTCCTGGCTGTTGCACTTTCTCAGACCTTCCT < 41bp 0.825441498183292 0.457201024938892 0.7249438 0.322914 prediction 0.650882996366583 Functional Loss - LPCAT3;C1S ENSG00000182326 UTR5 Human protein_coding chr12:7150280 chr12:7150281 . . 0 22 hPsi_associated_SNPs_5413 0 0 0 0 1 unknown 0.438719163592036 0.438718594337529 0.4498876 0 hPsi_site_10830 iPseU_CNN:0.4498876;iRNA_PseU:0 10831 chr16 57714493 57714493 1 + T G UCEC 57714492 + 57714472 57714512 41 GCTGTGGGGTCTCCATGATCTTCCTGGCCTTCACCATTATT GCTGTGGGGTCTCCATGATCTGCCTGGCCTTCACCATTATT < 41bp 0.825433200430743 0.494196917446681 0.54184955 0.24371892 prediction 0.650866400861487 Functional Loss - ADGRG3 ENSG00000182885 CDS Human protein_coding chr16:57714492 chr16:57714493 nonsynonymous SNV 0.965 4 22 hPsi_associated_SNPs_5414 0 0 0 0 2 Nucleus 0.43871859299516 0.438718593008476 0.0836991 0 hPsi_site_10831 iPseU_CNN:0.0836991;iRNA_PseU:0 10832 chr13 77574905 77574905 1 + A G UCEC 77574904 + 77574884 77574924 41 TAGCCATAAAAAGATTTTATTACCCCTTCAAACCACATTTG TAGCCATAAAAAGATTTTATTGCCCCTTCAAACCACATTTG < 41bp 0.825410780631037 0.430505064592647 0.510786 0.2897508 prediction 0.650821561262074 Functional Loss - CLN5 ENSG00000102805 CDS Human protein_coding chr13:77574904 chr13:77574905 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_5415 0 0 0 0 0 Endoplasmic reticulum 0.438277369508756 0.440054251767095 0.0215719999999999 0 hPsi_site_10832 iPseU_CNN:0.0215719999999999;iRNA_PseU:0 10833 chr1 40874374 40874374 1 + A G LUSC 40874373 + 40874353 40874393 41 CAAACCGACTTTATGAAGCCTATCTTCCTGAGACCTTTCGG CAAACCGACTTTATGAAGCCTGTCTTCCTGAGACCTTTCGG < 41bp 0.899885766308603 0.574483813305999 0.66061276 0.37541592 prediction 0.650803906005207 Functional Loss - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40874373 chr1:40874374 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_5416 0 0 1 0 2 Ribosome 0.438718590800752 0.438718592574252 0.32122552 0 hPsi_site_10833 iPseU_CNN:0.32122552;iRNA_PseU:0 10834 chr4 48487014 48487014 1 + A G UCEC 48487013 + 48486993 48487033 41 TGCCCCTGTGCCTGTGGATCTACAGCTGGGCTTGGATCAAC TGCCCCTGTGCCTGTGGATCTGCAGCTGGGCTTGGATCAAC < 41bp 0.825398145695688 0.396488190877098 0.3340512 0.2518829 prediction 0.650796291391377 Functional Loss - SLC10A4 ENSG00000145248 CDS Human protein_coding chr4:48487013 chr4:48487014 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5417 0 0 1 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_10834 iPseU_CNN:0;iRNA_PseU:0 10835 chr16 67226934 67226934 1 + A G UCEC 67226933 + 67226913 67226953 41 GGTGTGGGGCCTGGCTGCAATACCCGGGAGATTGCTGACAA GGTGTGGGGCCTGGCTGCAATGCCCGGGAGATTGCTGACAA < 41bp 0.825390202150295 0.410816814746768 0.6557887 0.2963957 prediction 0.65078040430059 Functional Loss - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67226933 chr16:67226934 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5418 0 0 1 0 1 Cytosol 0.438718556556276 0.438718601312604 0.3115774 0 hPsi_site_10835 iPseU_CNN:0.3115774;iRNA_PseU:0 Fibrous dysplasia of jaw Fibrous dysplasia of jaw 10836 chr9 139699072 139699072 1 + A G HNSC 139699071 + 139699051 139699091 41 CGAAGGAGACCAGCGAGAAGTACCGCCGGGTAAGCCCCAGG CGAAGGAGACCAGCGAGAAGTGCCGCCGGGTAAGCCCCAGG < 41bp 0.825389332948362 0.411794994200781 0.6976059 0.24369368 prediction 0.650778665896723 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139699071 chr9:139699072 nonsynonymous SNV 0.966 1 22 hPsi_associated_SNPs_5419 0 0 1 0 1 chromatin 0.438679813022683 0.438748309236147 0.3952118 0 hPsi_site_10836 iPseU_CNN:0.3952118;iRNA_PseU:0 10837 chr11 397085 397085 1 + A G LUSC 397084 + 397064 397104 41 CCGGGGGCCTGGACGACCGCTACAGCCTGGTGTCTGAGCAG CCGGGGGCCTGGACGACCGCTGCAGCCTGGTGTCTGAGCAG < 41bp 0.89710935901502 0.571734293591644 0.71558774 0.48689038 prediction 0.650750130846752 Functional Loss - PKP3 ENSG00000184363 CDS Human protein_coding chr11:397084 chr11:397085 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_5420 0 0 1 0 0 Ribosome 0.438737626008831 0.438718717235737 0.43117548 0 hPsi_site_10837 iPseU_CNN:0.43117548;iRNA_PseU:0 10838 chr7 134849673 134849673 1 + A G COAD 134849672 + 134849652 134849692 41 TCTGGGCAGCGCCCAGGCCTTACTCATCCTCTTGCTTATAG TCTGGGCAGCGCCCAGGCCTTGCTCATCCTCTTGCTTATAG < 41bp 0.890725365033692 0.565351826119969 0.8154096 0.32303035 prediction 0.650747077827445 Functional Loss - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849672 chr7:134849673 synonymous SNV . 0 22 hPsi_associated_SNPs_5421 0 0 1 0 0 chromatin 0.438716854462346 0.438699749569873 0.6308192 0 hPsi_site_10838 iPseU_CNN:0.6308192;iRNA_PseU:0 10839 chr6 125397905 125397905 1 + T G ESCA 125397904 + 125397884 125397924 41 AGATACCGCCAGCTCCGATTTTTTGGAGACCACACATCAAA AGATACCGCCAGCTCCGATTTGTTGGAGACCACACATCAAA < 41bp 0.834323698816202 0.508981761606971 0.5864515 0.38304526 prediction 0.650683874418462 Functional Loss - RNF217 ENSG00000146373 CDS Human protein_coding chr6:125397904 chr6:125397905 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_5422 0 0 1 0 1 Cytosol 0.438718676809032 0.438671291975439 0.172903 0 hPsi_site_10839 iPseU_CNN:0.172903;iRNA_PseU:0 10840 chr17 43321302 43321302 1 + A G LUSC 43321301 + 43321281 43321321 41 AGAGGAGGACCGCTTCATGCTATGCTTCAGCCGCATCCCGC AGAGGAGGACCGCTTCATGCTGTGCTTCAGCCGCATCCCGC < 41bp 0.910077542167738 0.584749869078396 0.78964925 0.45925277 prediction 0.650655346178685 Functional Loss - FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43321301 chr17:43321302 synonymous SNV . 0 22 hPsi_associated_SNPs_5423 0 0 0 0 1 chromatin 0.4387127371909 0.438697829014295 0.5792985 0 hPsi_site_10840 iPseU_CNN:0.5792985;iRNA_PseU:0 Parkinson disease 5 Parkinson disease 5 10841 chr19 55995413 55995413 1 + A G rs149561076 55995412 + 55995392 55995432 41 CGAACAGACTCGACTCTGCGTACAGGAGGTAGAAACACTTC CGAACAGACTCGACTCTGCGTGCAGGAGGTAGAAACACTTC < 41bp 0.879907299222236 0.554587388396531 0.70428896 0.31871024 prediction 0.65063982165141 Functional Loss - ZNF628 ENSG00000197483 CDS Human protein_coding chr19:55995412 chr19:55995413 synonymous SNV . 0 22 hPsi_associated_SNPs_5424 0 0 1 0 0 exosome 0.438717871685613 0.438718592955254 0.40857792 0 hPsi_site_10841 iPseU_CNN:0.40857792;iRNA_PseU:0 10842 chr10 76979092 76979092 1 + A G DLBC 76979091 + 76979071 76979111 41 GGTTTGAAACTGACATTTGATACTACCTTCTCACCAAACAC GGTTTGAAACTGACATTTGATGCTACCTTCTCACCAAACAC < 41bp 0.825318526390682 0.422434158703306 0.4131971 0.2658233 prediction 0.650637052781365 Functional Loss - VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76979091 chr10:76979092 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5425 0 0 1 0 1 Ribosome 0.438718526116929 0.438720972059666 0 0 hPsi_site_10842 iPseU_CNN:0;iRNA_PseU:0 10843 chr4 147561163 147561163 1 + A C LUSC 147561162 + 147561142 147561182 41 CCGGACGCCACCTACCACACTATGAATACCATCCCGTGCAC CCGGACGCCACCTACCACACTCTGAATACCATCCCGTGCAC < 41bp 0.865500901414803 0.540197411444056 0.65853804 0.7778142 prediction 0.650606979941495 Functional Loss - POU4F2 ENSG00000151615 CDS Human protein_coding chr4:147561162 chr4:147561163 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5426 0 0 0 0 0 unknown 0.429962871517043 0.438725195413323 0 0 hPsi_site_10843 iPseU_CNN:0;iRNA_PseU:0 10844 chr2 121742087 121742087 1 + A G UCEC 121742086 + 121742066 121742106 41 TCCCAGGCTGCACCAAGAGATACACAGACCCCAGCTCTCTC TCCCAGGCTGCACCAAGAGATGCACAGACCCCAGCTCTCTC < 41bp 0.825292241056898 0.409893484923373 0.7903477 0.3076377 prediction 0.650584482113796 Functional Loss - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121742086 chr2:121742087 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5427 0 0 0 0 1 Endoplasmic reticulum 0.438739051108581 0.438719635786322 0.5806954 0 hPsi_site_10844 iPseU_CNN:0.5806954;iRNA_PseU:0 10845 chr13 115090137 115090137 1 + A G rs370907860 115090136 + 115090116 115090156 41 TCTCGGAAGTCAGCCCGGACTACCTCCCCTGAGCCAAGGAA TCTCGGAAGTCAGCCCGGACTGCCTCCCCTGAGCCAAGGAA < 41bp 0.825287132731292 0.42473994049833 0.31178415 0.23551136 prediction 0.650574265462585 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090136 chr13:115090137 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_5428 0 0 1 0 0 nucleus 0.438718592994707 0.438718592938144 0 0 hPsi_site_10845 iPseU_CNN:0;iRNA_PseU:0 10846 chr20 61464375 61464375 1 + A G rs79269394 61464374 + 61464354 61464394 41 GGGGTGTATCGTTTTCAGGGTATTGCAGGTTCCGACGGTCT GGGGTGTATCGTTTTCAGGGTGTTGCAGGTTCCGACGGTCT < 41bp 0.896032605615849 0.57076466270019 0.7246655 0.1972813 prediction 0.650535885831318 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61464374 chr20:61464375 nonsynonymous SNV 0.137 1 22 hPsi_associated_SNPs_5429 2 0 0 0 1 Cytosol 0.438717212036227 0.438718479065864 0.449331 0 hPsi_site_10846 iPseU_CNN:0.449331;iRNA_PseU:0 10847 chr4 40778162 40778162 1 + T G rs2437323 40778161 + 40778141 40778181 41 ACAGGCTCATGGTACACAGTTTCCCACATGTCAATTTTAAC ACAGGCTCATGGTACACAGTTGCCCACATGTCAATTTTAAC < 41bp 0.834083864984359 0.508827428179982 0.44442838 0.17964894 prediction 0.650512873608755 Functional Loss - NSUN7 ENSG00000179299 CDS Human protein_coding chr4:40778161 chr4:40778162 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_5430 0 0 0 0 1 exosome 0.438796079722368 0.438608528759718 0 0 hPsi_site_10847 iPseU_CNN:0;iRNA_PseU:0 10848 chr1 161771972 161771972 1 + A G UCEC 161771971 + 161771951 161771991 41 TAATCACGTGGTGAATGTGGTACCAGCCCCTTCAGCGAATA TAATCACGTGGTGAATGTGGTGCCAGCCCCTTCAGCGAATA < 41bp 0.897432014749585 0.572185012487105 0.8441953 0.4431629 prediction 0.65049400452496 Functional Loss - ATF6 ENSG00000118217 CDS Human protein_coding chr1:161771971 chr1:161771972 synonymous SNV . 0 22 hPsi_associated_SNPs_5431 0 0 1 0 1 Endoplasmic reticulum 0.438718222359998 0.438735922086961 0.6883906 0 hPsi_site_10848 iPseU_CNN:0.6883906;iRNA_PseU:0 10849 chr1 222898865 222898865 1 + A G rs548731047 222898864 + 222898844 222898884 41 AGTCACGACTCATAGAAGCATACGTTATTCAATGTCAGGCT AGTCACGACTCATAGAAGCATGCGTTATTCAATGTCAGGCT < 41bp 0.898521678294077 0.573292407665079 0.56327564 0.24385604 prediction 0.650458541257997 Functional Loss - BROX ENSG00000162819 CDS Human protein_coding chr1:222898864 chr1:222898865 nonsynonymous SNV 0.488 4 22 hPsi_associated_SNPs_5432 0 0 1 0 2 cytosol 0.4386925504341 0.438491871273721 0.12655128 0 hPsi_site_10849 iPseU_CNN:0.12655128;iRNA_PseU:0 10850 chr22 30762175 30762175 1 + T G SKCM 30762174 + 30762154 30762194 41 GCTGGAGCACTATGACCATGTTCCGGGTGACCCCGAGTTCA GCTGGAGCACTATGACCATGTGCCGGGTGACCCCGAGTTCA < 41bp 0.82707433319185 0.501845872128914 0.56090957 0.2669037 prediction 0.65045692212587 Functional Loss - CCDC157 ENSG00000187860 CDS Human protein_coding chr22:30762174 chr22:30762175 synonymous SNV . 0 22 hPsi_associated_SNPs_5433 0 0 0 0 1 exosome 0.438738972226759 0.438746114416039 0.12181914 0 hPsi_site_10850 iPseU_CNN:0.12181914;iRNA_PseU:0 10851 chrX 57162287 57162287 1 + A G COAD 57162286 + 57162266 57162306 41 CACCAAATCGTAGACATAGATATGGAAATCATCATCAAACT CACCAAATCGTAGACATAGATGTGGAAATCATCATCAAACT < 41bp 0.87047625265945 0.545250872321641 0.30897444 0.25626662 prediction 0.650450760675617 Functional Loss - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162286 chrX:57162287 synonymous SNV . 0 22 hPsi_associated_SNPs_5434 0 0 0 0 0 exosome 0.43872105147873 0.438713300735429 0 0 hPsi_site_10851 iPseU_CNN:0;iRNA_PseU:0 10852 chr1 248344321 248344321 1 + A G COAD 248344320 + 248344300 248344340 41 AAATACTAGCATTGATTATGTACATTGCCTAACATATTTAT AAATACTAGCATTGATTATGTGCATTGCCTAACATATTTAT < 41bp 0.825189942964076 0.487296113713664 0.51913065 0.2993257 prediction 0.650379885928152 Functional Loss - OR2M2 ENSG00000198601 CDS Human protein_coding chr1:248344320 chr1:248344321 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_5435 0 0 0 0 0 exosome 0.438718080247588 0.438681603668305 0.0382613000000001 0 hPsi_site_10852 iPseU_CNN:0.0382613000000001;iRNA_PseU:0 10853 chr11 55563865 55563865 1 + A G UCEC 55563864 + 55563844 55563884 41 AACAGTCAAAGTGGCCTCTGTATTTTACACAGTTGTCAACC AACAGTCAAAGTGGCCTCTGTGTTTTACACAGTTGTCAACC < 41bp 0.878494926459129 0.553314112807648 0.5224057 0.31856003 prediction 0.650361627302962 Functional Loss - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563864 chr11:55563865 synonymous SNV . 0 22 hPsi_associated_SNPs_5436 0 0 0 0 0 unknown 0.438718323389495 0.43871840419709 0.0448113999999999 0 hPsi_site_10853 iPseU_CNN:0.0448113999999999;iRNA_PseU:0 10854 chr14 24676555 24676555 1 + A G UCEC 24676554 + 24676534 24676574 41 AGATCTTACGAGGCTTGCCCTACAACCCTTTCCTGTCTGAC AGATCTTACGAGGCTTGCCCTGCAACCCTTTCCTGTCTGAC < 41bp 0.905549904721892 0.580370876025633 0.72018504 0.52099097 prediction 0.650358057392519 Functional Loss - TSSK4 ENSG00000139908 CDS Human protein_coding chr14:24676554 chr14:24676555 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5437 0 0 0 0 0 nucleus 0.438719308261517 0.438718580435464 0.39838814 0 hPsi_site_10854 iPseU_CNN:0.39838814;iRNA_PseU:0 10855 chr19 45316559 45316559 1 + A C LUSC 45316558 + 45316538 45316578 41 CGGCCCCCAAGATCACGTGGTATCGCAACGGGCAGCGCCTG CGGCCCCCAAGATCACGTGGTCTCGCAACGGGCAGCGCCTG < 41bp 0.825170217858914 0.449628704540368 0.8189987 0.23305732 prediction 0.650340435717829 Functional Loss - BCAM ENSG00000187244 CDS Human protein_coding chr19:45316558 chr19:45316559 nonsynonymous SNV 0.964 2 22 hPsi_associated_SNPs_5438 0 0 0 0 2 cytosol 0.438721029714346 0.438718895379614 0.6379974 0 hPsi_site_10855 iPseU_CNN:0.6379974;iRNA_PseU:0 10856 chr10 101124231 101124231 1 + A G rs192888882 101124230 + 101124210 101124250 41 CGCTTTGAAAATGGAGCCTTTACTTACTATGGCGTCCCAGC CGCTTTGAAAATGGAGCCTTTGCTTACTATGGCGTCCCAGC < 41bp 0.825165987869795 0.402905690673559 0.62705106 0.3545726 prediction 0.65033197573959 Functional Loss - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101124230 chr10:101124231 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_5439 0 0 1 0 1 cytosol 0.437990625714824 0.438273112784271 0.25410212 0 hPsi_site_10856 iPseU_CNN:0.25410212;iRNA_PseU:0 10857 chr17 5264580 5264580 1 + T C STAD 5264581 - 5264561 5264601 41 AAACATGTCATTGTCCGATTTACTGAAAGGATCTCCAGATG AAACATGTCATTGTCCGATTTGCTGAAAGGATCTCCAGATG < 41bp 0.8864513942121 0.561304391814265 0.37791348 0.16974244 prediction 0.65029400479567 Functional Loss - RABEP1 ENSG00000029725 CDS Human protein_coding chr17:5264581 chr17:5264580 synonymous SNV . 0 22 hPsi_associated_SNPs_5440 0 0 0 0 0 Ribosome 0.439356418148274 0.469645778165109 0 0 hPsi_site_10857 iPseU_CNN:0;iRNA_PseU:0 10858 chr3 184002790 184002790 1 + T G GBM 184002789 + 184002769 184002809 41 GACTGGCTTGAGTTCCTGTCTTTCTTGCTGTCACCATTGGA GACTGGCTTGAGTTCCTGTCTGTCTTGCTGTCACCATTGGA < 41bp 0.826050851908873 0.500909155036153 0.25504965 0.25246802 prediction 0.65028339374544 Functional Loss - ECE2 ENSG00000145194 CDS Human protein_coding chr3:184002789 chr3:184002790 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5441 0 0 0 0 1 Ribosome 0.438718593957396 0.43819425654246 0 0 hPsi_site_10858 iPseU_CNN:0;iRNA_PseU:0 10859 chr5 179196042 179196042 1 + A G STAD 179196041 + 179196021 179196061 41 GGAGCAGCAGCAAAAGCATTTACAGCAACAGCAGTTCCTTC GGAGCAGCAGCAAAAGCATTTGCAGCAACAGCAGTTCCTTC < 41bp 0.902507463442959 0.577377623425267 0.41831154 0.31503892 prediction 0.650259680035385 Functional Loss - MAML1 ENSG00000161021 CDS Human protein_coding chr5:179196041 chr5:179196042 synonymous SNV . 0 22 hPsi_associated_SNPs_5442 0 0 1 0 1 Ribosome 0.438608839657594 0.4384834531569 0 0 hPsi_site_10859 iPseU_CNN:0;iRNA_PseU:0 10860 chr2 187370224 187370224 1 + T G UCEC 187370223 + 187370203 187370243 41 CCAAAATCACTCTAGAATCTTTTCTTGCCTGGAAGAAAAGG CCAAAATCACTCTAGAATCTTGTCTTGCCTGGAAGAAAAGG < 41bp 0.832144226110459 0.507015166899804 0.67795515 0.41213495 prediction 0.650258118421311 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187370223 chr2:187370224 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5443 0 0 1 0 0 Ribosome 0.438718589697634 0.438713023847686 0.3559103 0 hPsi_site_10860 iPseU_CNN:0.3559103;iRNA_PseU:0 10861 chr4 84516043 84516043 1 + A G LUAD 84516042 + 84516022 84516062 41 ATGGGAATTATTCAGAGAGCTATGGTCAAGGCTTGTCCTCA ATGGGAATTATTCAGAGAGCTGTGGTCAAGGCTTGTCCTCA < 41bp 0.90088230042978 0.575768612886497 0.2928006 0.24859208 prediction 0.650227375086565 Functional Loss - GPAT3 ENSG00000138678 CDS Human protein_coding chr4:84516042 chr4:84516043 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_5444 0 0 1 0 2 chromatin 0.438314914117158 0.43867060647517 0 0 hPsi_site_10861 iPseU_CNN:0;iRNA_PseU:0 10862 chr7 90895112 90895112 1 + A G LUAD 90895111 + 90895091 90895131 41 CTTGTGAGCCGACCAAGGTGTATGGGCTCATGTACTTCGGG CTTGTGAGCCGACCAAGGTGTGTGGGCTCATGTACTTCGGG < 41bp 0.894270196034373 0.56920504091906 0.5595196 0.3579846 prediction 0.650130310230627 Functional Loss - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90895111 chr7:90895112 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_5445 0 0 1 0 0 Endoplasmic reticulum 0.435790234260476 0.439849188114511 0.1190392 0 hPsi_site_10862 iPseU_CNN:0.1190392;iRNA_PseU:0 10863 chr16 30780828 30780828 1 + A G rs4889506 30780827 + 30780807 30780847 41 GCTGCTGACTGTGCAGAAGCTAGAGGAGAAGGAGCGAGCCT GCTGCTGACTGTGCAGAAGCTGGAGGAGAAGGAGCGAGCCT < 41bp 0.825004403833359 0.40433557340077 0.43715486 0.28032562 prediction 0.650008807666718 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30780827 chr16:30780828 synonymous SNV . 0 22 hPsi_associated_SNPs_5446 0 0 1 0 2 Ribosome 0.438093866480734 0.43873770083507 0 0 hPsi_site_10863 iPseU_CNN:0;iRNA_PseU:0 10864 chr14 92600662 92600662 1 + A G HNSC 92600661 + 92600641 92600681 41 GGATGCAGCCTTTGATAAAATACAGCAGCTAAAATTCTCTC GGATGCAGCCTTTGATAAAATGCAGCAGCTAAAATTCTCTC < 41bp 0.825001056251195 0.435057238686309 0.27871728 0.1966632 prediction 0.650002112502389 Functional Loss - CPSF2 ENSG00000165934 CDS Human protein_coding chr14:92600661 chr14:92600662 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5447 0 0 1 0 2 Ribosome 0.438718577657435 0.438730860829773 0 0 hPsi_site_10864 iPseU_CNN:0;iRNA_PseU:0 10865 chr17 4442237 4442237 1 + A G UCEC 4442236 + 4442216 4442256 41 CGGAAGCCAAACTGCTCCTTTATTTTTTAGAGCTGCTGATT CGGAAGCCAAACTGCTCCTTTGTTTTTTAGAGCTGCTGATT < 41bp 0.824957712127144 0.449540101363469 0.3269865 0.24973318 prediction 0.649915424254288 Functional Loss - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4442236 chr17:4442237 stoploss 1.000 0 22 hPsi_associated_SNPs_5448 0 0 0 1 0 Nucleus 0.438718739600577 0.438724195750284 0 0 hPsi_site_10865 iPseU_CNN:0;iRNA_PseU:0 10866 chr1 227075847 227075847 1 + A G LUAD 227075846 + 227075826 227075866 41 TGCTGCTGTTCCTCTTCACCTATATCTACCTTGGGTAAGTG TGCTGCTGTTCCTCTTCACCTGTATCTACCTTGGGTAAGTG < 41bp 0.824950176671787 0.411242809571544 0.4147765 0.31380734 prediction 0.649900353343573 Functional Loss - PSEN2 ENSG00000143801 CDS Human protein_coding chr1:227075846 chr1:227075847 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5449 0 0 1 0 2 Endoplasmic reticulum 0.438738125049888 0.438915213225846 0 0 hPsi_site_10866 iPseU_CNN:0;iRNA_PseU:0 10867 chr8 6303002 6303002 1 + A G rs372378731 6303001 + 6302981 6303021 41 AGTGAACATGAGCCATGTTTTATAGTTGACTGTAACATGGA AGTGAACATGAGCCATGTTTTGTAGTTGACTGTAACATGGA < 41bp 0.882501946246036 0.557566332511711 0.34372175 0.32641706 prediction 0.649871227468651 Functional Loss - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6303001 chr8:6303002 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_5450 1 0 1 0 1 Nucleus 0.438753773287641 0.438700980607862 0 0 hPsi_site_10867 iPseU_CNN:0;iRNA_PseU:0 10868 chr19 14707757 14707757 1 + A G LUAD 14707756 + 14707736 14707776 41 GCCAGAAGAGGTGGATGGTGTACCTGTGTCTGCTGGTGGTG GCCAGAAGAGGTGGATGGTGTGCCTGTGTCTGCTGGTGGTG < 41bp 0.902976588230889 0.578068782264956 0.4655732 0.22372913 prediction 0.649815611931865 Functional Loss - CLEC17A ENSG00000187912 CDS Human protein_coding chr19:14707756 chr19:14707757 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_5451 0 0 0 1 1 Nucleus 0.438628768579293 0.438717496142215 0 0 hPsi_site_10868 iPseU_CNN:0;iRNA_PseU:0 10869 chr6 11710161 11710161 1 + A G rs530232830 11710160 + 11710140 11710180 41 TTTAAGGAACAGGGGATGCTTACTTCTTTTGCGTTCCTCTG TTTAAGGAACAGGGGATGCTTGCTTCTTTTGCGTTCCTCTG < 41bp 0.824868477666402 0.491232662707732 0.48019585 0.26726416 prediction 0.649736955332805 Functional Loss - TMEM170B;ADTRP ENSG00000207419 ncRNA_exonic Human snoRNA chr6:11710160 chr6:11710161 . . 0 22 hPsi_associated_SNPs_5452 0 0 0 0 0 unknown 0.438718592907018 0.438718604702041 0 0 hPsi_site_10869 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10870 chr19 39589762 39589762 1 + A G rs139592140 39589761 + 39589741 39589781 41 GGGACACCCAGCAGGGCATGTATGACGCCGTTCTCCATGTG GGGACACCCAGCAGGGCATGTGTGACGCCGTTCTCCATGTG < 41bp 0.905479719603654 0.580633489915379 0.8499577 0.5611272 prediction 0.649692459376551 Functional Loss - ACP7 ENSG00000183760 CDS Human protein_coding chr19:39589761 chr19:39589762 nonsynonymous SNV 0.668 4 22 hPsi_associated_SNPs_5453 0 0 0 0 1 exosome 0.438557946890473 0.438635806200972 0.577661 0 hPsi_site_10870 iPseU_CNN:0.577661;iRNA_PseU:0 10871 chr1 167962557 167962557 1 + A G LUSC 167962556 + 167962536 167962576 41 GCAGAGTGACATCTCTGTGTTACAGTGAAGATGGTCAAGAG GCAGAGTGACATCTCTGTGTTGCAGTGAAGATGGTCAAGAG < 41bp 0.901549129209691 0.576703056512096 0.31418163 0.2115879 prediction 0.64969214539519 Functional Loss - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:167962556 chr1:167962557 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_5454 0 0 1 0 1 Cytosol 0.445301555133526 0.490048077021049 0 0 hPsi_site_10871 iPseU_CNN:0;iRNA_PseU:0 10872 chr17 39422063 39422063 1 + A G rs576405629 39422062 + 39422042 39422082 41 CCAGCTGCTGCCAGCCCTGCTACTGCCCAGCCTGCTGTGTG CCAGCTGCTGCCAGCCCTGCTGCTGCCCAGCCTGCTGTGTG < 41bp 0.883402105960005 0.558559088133723 0.59988594 0.2616184 prediction 0.649686035652564 Functional Loss - KRTAP9-6 ENSG00000212659 CDS Human protein_coding chr17:39422062 chr17:39422063 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_5455 0 0 0 0 0 unknown 0.438687561472995 0.438715238816061 0.19977188 0 hPsi_site_10872 iPseU_CNN:0.19977188;iRNA_PseU:0 10873 chr9 34976565 34976565 1 + A G STAD 34976564 + 34976544 34976584 41 CACTGGAGGACTTTCTGCGTTACCGCCACCAAGCAGCCAAG CACTGGAGGACTTTCTGCGTTGCCGCCACCAAGCAGCCAAG < 41bp 0.90355459119953 0.578734346437074 0.65822345 0.27200294 prediction 0.649640489524912 Functional Loss - PHF24 ENSG00000122733 CDS Human protein_coding chr9:34976564 chr9:34976565 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_5456 0 0 0 0 1 exosome 0.438678545148429 0.438717664860448 0.3164469 0 hPsi_site_10873 iPseU_CNN:0.3164469;iRNA_PseU:0 10874 chr1 110453379 110453379 1 + A G rs561803747 110453378 + 110453358 110453398 41 AGTGTGTGTGTGTGTGTGTGTATGTGTGTGTCTGGCGCCTG AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGGCGCCTG < 41bp 0.868481208279389 0.54366461101418 0.4388525 0.28024137 prediction 0.649633194530419 Functional Loss - CSF1 ENSG00000184371 UTR5 Human protein_coding chr1:110453378 chr1:110453379 . . 0 22 hPsi_associated_SNPs_5457 0 0 1 0 0 chromatin 0.447228565365557 0.463195640862428 0 0 hPsi_site_10874 iPseU_CNN:0;iRNA_PseU:0 10875 chr19 7975017 7975017 1 + A G STAD 7975016 + 7974996 7975036 41 CCTGACCATCGGGGGCCAGGTACCACCTTCACTGTGGCGGG CCTGACCATCGGGGGCCAGGTGCCACCTTCACTGTGGCGGG < 41bp 0.834928423765436 0.5101798540881 0.8637872 0.33292043 prediction 0.649497139354672 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975016 chr19:7975017 synonymous SNV . 0 22 hPsi_associated_SNPs_5458 0 0 0 0 1 Cytosol 0.438501862151601 0.438704300982094 0.7275744 0 hPsi_site_10875 iPseU_CNN:0.7275744;iRNA_PseU:0 10876 chr7 127235587 127235587 1 + T G UCEC 127235586 + 127235566 127235606 41 AGTCCAATGGCAAGGACGTGTTTTGCACTTCCCACGTCCTC AGTCCAATGGCAAGGACGTGTGTTGCACTTCCCACGTCCTC < 41bp 0.824705854109668 0.498607491181339 0.6465825 0.41174775 prediction 0.649411708219336 Functional Loss - FSCN3 ENSG00000106328 CDS Human protein_coding chr7:127235586 chr7:127235587 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_5459 0 0 0 0 0 exosome 0.438717943812123 0.4392405947998 0.293165 0 hPsi_site_10876 iPseU_CNN:0.293165;iRNA_PseU:0 10877 chr12 100707265 100707265 1 + A G rs56052637 100707264 + 100707244 100707284 41 AGTTCGTGAACATGTAAAGCTACTGTTAAATGTAACTCCGA AGTTCGTGAACATGTAAAGCTGCTGTTAAATGTAACTCCGA < 41bp 0.824676358115427 0.422383437515387 0.575771 0.24528295 prediction 0.649352716230853 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100707264 chr12:100707265 synonymous SNV . 0 22 hPsi_associated_SNPs_5460 0 0 1 0 2 chromatin 0.43877359489302 0.438720331177937 0.151542 0 hPsi_site_10877 iPseU_CNN:0.151542;iRNA_PseU:0 10878 chr8 37699017 37699017 1 + A G STAD 37699016 + 37698996 37699036 41 GGGTGGTGTGCAGCTGCTTGTACGGGGTGGCAGCCTCCGCC GGGTGGTGTGCAGCTGCTTGTGCGGGGTGGCAGCCTCCGCC < 41bp 0.902200887825325 0.577534388324059 0.79843813 0.3503729 prediction 0.64933299900253 Functional Loss - ADGRA2 ENSG00000020181 CDS Human protein_coding chr8:37699016 chr8:37699017 nonsynonymous SNV 0.963 4 22 hPsi_associated_SNPs_5461 0 0 0 0 0 chromatin 0.43869393616819 0.438728121645147 0.59687626 0 hPsi_site_10878 iPseU_CNN:0.59687626;iRNA_PseU:0 10879 chr4 83829043 83829043 1 + A G COAD 83829042 + 83829022 83829062 41 GCAGTAGCAAAGTCTATGATTATGTAAGAAAGATTCTTAAG GCAGTAGCAAAGTCTATGATTGTGTAAGAAAGATTCTTAAG < 41bp 0.824644301282542 0.423558450779517 0.31893796 0.26325816 prediction 0.649288602565085 Functional Loss - THAP9 ENSG00000168152 CDS Human protein_coding chr4:83829042 chr4:83829043 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_5462 0 0 0 0 1 chromatin 0.438682694038953 0.438249828538711 0 0 hPsi_site_10879 iPseU_CNN:0;iRNA_PseU:0 10880 chr1 151491143 151491143 1 + A G STAD 151491142 + 151491122 151491162 41 GCTAAGGATGCAAGAGCCAGTACCTACGGGGTTGCTGTGCG GCTAAGGATGCAAGAGCCAGTGCCTACGGGGTTGCTGTGCG < 41bp 0.898579308573648 0.573940741214677 0.46766692 0.3121099 prediction 0.649277134717942 Functional Loss - CGN ENSG00000143375 CDS Human protein_coding chr1:151491142 chr1:151491143 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_5463 0 0 0 0 0 exosome 0.438718828612457 0.438719338337129 0 0 hPsi_site_10880 iPseU_CNN:0;iRNA_PseU:0 10881 chr15 49935658 49935658 1 + A G ESCA 49935657 + 49935637 49935677 41 AGACTACCATACTGATATATTAAAAGAGAAATACAGAGGGC AGACTACCATACTGATATATTGAAAGAGAAATACAGAGGGC < 41bp 0.824634405487266 0.449973062754965 0.2391504 0.22891068 prediction 0.649268810974531 Functional Loss - DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49935657 chr15:49935658 synonymous SNV . 0 22 hPsi_associated_SNPs_5464 0 0 1 0 0 Cytosol 0.438718578796415 0.438657769306065 0 0 hPsi_site_10881 iPseU_CNN:0;iRNA_PseU:0 10882 chrX 118603838 118603838 1 + T G LIHC 118603837 + 118603817 118603857 41 GTGTGGACAAGAGAACCCAGTTTTGGCTCTACTTTGCAGGG GTGTGGACAAGAGAACCCAGTGTTGGCTCTACTTTGCAGGG < 41bp 0.827756481958342 0.503136288578552 0.6041018 0.29445755 prediction 0.64924038675958 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118603837 chrX:118603838 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5465 0 0 1 0 0 Cytosol 0.438718263335199 0.43884748038259 0.2082036 0 hPsi_site_10882 iPseU_CNN:0.2082036;iRNA_PseU:0 10883 chr14 100842908 100842908 1 + A G rs60819702 100842907 + 100842887 100842927 41 CTAAAGCGCCCCGTGCCGCTTAACGCGGTCTCTCATAGCCG CTAAAGCGCCCCGTGCCGCTTGACGCGGTCTCTCATAGCCG < 41bp 0.824613964829968 0.463084457848349 0.80542356 0.33240342 prediction 0.649227929659937 Functional Loss - WDR25 ENSG00000140105;ENSG00000176473 UTR5 Human other chr14:100842907 chr14:100842908 . . 0 22 hPsi_associated_SNPs_5466 0 0 1 0 0 chromatin 0.438718738779609 0.438718148937708 0.61084712 0 hPsi_site_10883 iPseU_CNN:0.61084712;iRNA_PseU:0 10884 chr13 45601944 45601944 1 + A G UCEC 45601943 + 45601923 45601963 41 TCAAAAAGATCAGAATCTCTTATGGACATACATCATAAAAA TCAAAAAGATCAGAATCTCTTGTGGACATACATCATAAAAA < 41bp 0.895133592830601 0.570536145326496 0.4484303 0.24515489 prediction 0.649194895008209 Functional Loss - GPALPP1 ENSG00000133114 CDS Human protein_coding chr13:45601943 chr13:45601944 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5467 0 0 1 0 1 cytosol 0.438668794200215 0.438718545779133 0 0 hPsi_site_10884 iPseU_CNN:0;iRNA_PseU:0 10885 chr1 25889188 25889188 1 + T G UCEC 25889187 + 25889167 25889207 41 CTTCAAAGTCGCCTTTGAGTTTTGGCAGGTGTCCAAGGAAG CTTCAAAGTCGCCTTTGAGTTGTGGCAGGTGTCCAAGGAAG < 41bp 0.826204737478206 0.501618650153259 0.38264665 0.31789595 prediction 0.649172174649894 Functional Loss - LDLRAP1 ENSG00000157978 CDS Human protein_coding chr1:25889187 chr1:25889188 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5468 0 0 1 0 2 Ribosome 0.438718592705035 0.438718364798371 0 0 hPsi_site_10885 iPseU_CNN:0;iRNA_PseU:0 10886 chr3 140998292 140998292 1 + A G COAD 140998291 + 140998271 140998311 41 ACGGAGACAGGTACCCACTGTATGTCATTCCCAAAACAAAG ACGGAGACAGGTACCCACTGTGTGTCATTCCCAAAACAAAG < 41bp 0.824568284249544 0.402447382337229 0.88766015 0.76777434 prediction 0.649136568499087 Functional Loss - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:140998291 chr3:140998292 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5469 0 0 1 0 2 Ribosome 0.438696909861022 0.438474509802817 0.23977162 0 hPsi_site_10886 iPseU_CNN:0.23977162;iRNA_PseU:0 10887 chr1 32502514 32502514 1 + A G STAD 32502513 + 32502493 32502533 41 TGTATCTTTCGTTCCCAGGATATGATGGATGATATCTGTCA TGTATCTTTCGTTCCCAGGATGTGATGGATGATATCTGTCA < 41bp 0.824567999983057 0.425282061535793 0.35589296 0.29032928 prediction 0.649135999966114 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502513 chr1:32502514 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5470 0 0 1 0 1 Nucleus 0.438709900206975 0.438466401818786 0 0 hPsi_site_10887 iPseU_CNN:0;iRNA_PseU:0 10888 chr20 44521926 44521926 1 + A G ESCA 44521925 + 44521905 44521945 41 ACTCCCTGGTCTACTTTGCCTACTACCATGGCCTTCTGGGG ACTCCCTGGTCTACTTTGCCTGCTACCATGGCCTTCTGGGG < 41bp 0.824567149785774 0.404056538824984 0.6317879 0.297017 prediction 0.649134299571549 Functional Loss - CTSA ENSG00000064601 CDS Human protein_coding chr20:44521925 chr20:44521926 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5471 0 0 1 0 2 Ribosome 0.438713940488617 0.438718588726408 0.2635758 0 hPsi_site_10888 iPseU_CNN:0.2635758;iRNA_PseU:0 10889 chr13 48828053 48828053 1 + A G LUSC 48828052 + 48828032 48828072 41 TTCTAGGAGGAGCATACTTGTACAAATATTTTGCACTTCAA TTCTAGGAGGAGCATACTTGTGCAAATATTTTGCACTTCAA < 41bp 0.824555522404334 0.431286964262185 0.57157 0.29770622 prediction 0.649111044808669 Functional Loss - ITM2B ENSG00000136156 CDS Human protein_coding chr13:48828052 chr13:48828053 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5472 0 0 1 0 1 Ribosome 0.43871861393753 0.438718593885292 0.14314 0 hPsi_site_10889 iPseU_CNN:0.14314;iRNA_PseU:0 10890 chr17 8172506 8172506 1 + T G rs62637606 8172505 + 8172485 8172525 41 GGGCATGGCGACCCCCTCCATTTGATACTCTGACCACCTCC GGGCATGGCGACCCCCTCCATGTGATACTCTGACCACCTCC < 41bp 0.830421321304625 0.505871328998282 0.7300818 0.5592828 prediction 0.649099984612685 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8172505 chr17:8172506 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_5473 0 0 1 0 0 Nucleus 0.438718708914839 0.438715111275833 0.341598 0 hPsi_site_10890 iPseU_CNN:0.341598;iRNA_PseU:0 10891 chr14 20296002 20296002 1 + A C LUAD 20296001 + 20295981 20296021 41 CCATCTGCCGGCCTCTGCACTATCCTACTGTCATGAACCCT CCATCTGCCGGCCTCTGCACTCTCCTACTGTCATGAACCCT < 41bp 0.824544227048583 0.470819190402007 0.68387574 0.27742314 prediction 0.649088454097165 Functional Loss - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20296001 chr14:20296002 nonsynonymous SNV 0.950 2 22 hPsi_associated_SNPs_5474 0 0 0 0 0 unknown 0.438717721669814 0.43871740803002 0.36775148 0 hPsi_site_10891 iPseU_CNN:0.36775148;iRNA_PseU:0 10892 chr5 150858923 150858923 1 + T G UCS 150858922 + 150858902 150858942 41 GCTGTACTCCATCGGGATCTTTTTCACCTACGCACTCCAGT GCTGTACTCCATCGGGATCTTGTTCACCTACGCACTCCAGT < 41bp 0.824483968024388 0.487409979727234 0.63574857 0.30190256 prediction 0.648967936048775 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150858922 chr5:150858923 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_5475 0 0 1 0 1 Endoplasmic reticulum 0.438782602593372 0.43872134276827 0.27149714 0 hPsi_site_10892 iPseU_CNN:0.27149714;iRNA_PseU:0 10893 chr9 33625221 33625221 1 + A G rs7868961 33625220 + 33625200 33625240 41 AGTACGGCAAGTCCCTGTACTATTACATCCAGCAAGACACT AGTACGGCAAGTCCCTGTACTGTTACATCCAGCAAGACACT < 41bp 0.824468432805171 0.439476028700392 0.8146475 0.49758697 prediction 0.648936865610342 Functional Loss - ANXA2P2 ENSG00000231991 ncRNA_exonic Human processed_pseudogene chr9:33625220 chr9:33625221 . . 0 22 hPsi_associated_SNPs_5476 0 0 1 0 0 unknown 0.442500582227418 0.478242200712377 0.629295 0 hPsi_site_10893 iPseU_CNN:0.629295;iRNA_PseU:0 10894 chr10 124274207 124274207 1 + A G rs533774916 124274206 + 124274186 124274226 41 AGTCCAACTAATGCAGTCGATACAATGCGTAGATAGAAGAA AGTCCAACTAATGCAGTCGATGCAATGCGTAGATAGAAGAA < 41bp 0.824440413183918 0.485085726048471 0.30572176 0.270577 prediction 0.648880826367837 Functional Loss - HTRA1 ENSG00000166033 UTR3 Human protein_coding chr10:124274206 chr10:124274207 . . 0 22 hPsi_associated_SNPs_5477 0 0 1 0 0 Ribosome 0.438718399217004 0.438721740074578 0 0 hPsi_site_10894 iPseU_CNN:0;iRNA_PseU:0 10895 chr1 240176122 240176122 1 + A G rs187627138 240176121 + 240176101 240176141 41 GATGGTGGTGGTGGGAAAGCTATCATAATTTTTGTTCCCTT GATGGTGGTGGTGGGAAAGCTGTCATAATTTTTGTTCCCTT < 41bp 0.85264354735556 0.528221175213129 0.6034662 0.373313 prediction 0.648844744284862 Functional Loss - RPS7P5 ENSG00000217327 ncRNA_exonic Human processed_pseudogene chr1:240176121 chr1:240176122 . . 0 22 hPsi_associated_SNPs_5478 0 0 0 0 0 unknown 0.438718592930637 0.438718592800713 0.2069324 0 hPsi_site_10895 iPseU_CNN:0.2069324;iRNA_PseU:0 10896 chr10 122646267 122646267 1 + A G CESC 122646266 + 122646246 122646286 41 CTCTGCCCGGGAACATTTTGTATTTACCGATATTGATGGCC CTCTGCCCGGGAACATTTTGTGTTTACCGATATTGATGGCC < 41bp 0.824409599461488 0.409223421124995 0.28953785 0.17252514 prediction 0.648819198922976 Functional Loss - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122646266 chr10:122646267 synonymous SNV . 0 22 hPsi_associated_SNPs_5479 0 0 1 0 2 Nucleus 0.438726552811233 0.438715608241952 0 0 hPsi_site_10896 iPseU_CNN:0;iRNA_PseU:0 10897 chr5 172396433 172396433 1 + A G rs188914799 172396432 + 172396412 172396452 41 ACAGGTGGTTATCACCAGGCTAAAACTGGACAAGGATCGGA ACAGGTGGTTATCACCAGGCTGAAACTGGACAAGGATCGGA < 41bp 0.888696660157916 0.564296148586113 0.36369663 0.22076526 prediction 0.648801023143607 Functional Loss - RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172396432 chr5:172396433 synonymous SNV . 0 22 hPsi_associated_SNPs_5480 0 0 0 0 1 Ribosome 0.43871933095991 0.438720365244342 0 0 hPsi_site_10897 iPseU_CNN:0;iRNA_PseU:0 10898 chr1 24077589 24077589 1 + A G STAD 24077588 + 24077568 24077608 41 GTCACAGAATGTCACCAACTTACTCTTCAGACCCTGAGTCT GTCACAGAATGTCACCAACTTGCTCTTCAGACCCTGAGTCT < 41bp 0.824384813035617 0.409580714969501 0.65017664 0.2808612 prediction 0.648769626071234 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077588 chr1:24077589 nonsynonymous SNV 0.679 2 22 hPsi_associated_SNPs_5481 0 0 1 0 0 unknown 0.438718600882182 0.438718512944479 0.30035328 0 hPsi_site_10898 iPseU_CNN:0.30035328;iRNA_PseU:0 10899 chr7 129103951 129103951 1 + A C SKCM 129103950 + 129103930 129103970 41 GCTAAGACAGACTCTATCAATATCCTGGCAGATGTCCTACC GCTAAGACAGACTCTATCAATCTCCTGGCAGATGTCCTACC < 41bp 0.824359262853511 0.451811062116378 0.6266581 0.6456 prediction 0.648718525707022 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129103950 chr7:129103951 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5482 0 0 1 0 2 Nucleus 0.438718595989544 0.438718601698556 0 0 hPsi_site_10899 iPseU_CNN:0;iRNA_PseU:0 10900 chr1 77806221 77806221 1 + A G SKCM 77806220 + 77806200 77806240 41 CAGAATGCTGCTCCATTGGTTAAATACTTCCAGGAAAAGGG CAGAATGCTGCTCCATTGGTTGAATACTTCCAGGAAAAGGG < 41bp 0.824353159177737 0.414300006199115 0.94412947 0.6771611 prediction 0.648706318355473 Functional Loss - AK5 ENSG00000154027 CDS Human protein_coding chr1:77806220 chr1:77806221 nonsynonymous SNV 0.877 1 22 hPsi_associated_SNPs_5483 0 0 0 0 1 Nucleus 0.438716082248997 0.438719442749173 0.53393674 0 hPsi_site_10900 iPseU_CNN:0.53393674;iRNA_PseU:0 10901 chr8 17822142 17822142 1 + A C HNSC 17822141 + 17822121 17822161 41 AAGAAGGAGATGAAGACGGTTACCTTTCTGAAGGAATTGTT AAGAAGGAGATGAAGACGGTTCCCTTTCTGAAGGAATTGTT < 41bp 0.824322848385949 0.479134386654414 0.65216535 0.3183667 prediction 0.648645696771898 Functional Loss - PCM1 ENSG00000078674 CDS Human protein_coding chr8:17822141 chr8:17822142 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5484 0 0 1 0 1 Nucleus 0.438593911239317 0.438718593879639 0.3043307 0 hPsi_site_10901 iPseU_CNN:0.3043307;iRNA_PseU:0 10902 chr2 163216845 163216845 1 + A G rs548493790 163216844 + 163216824 163216864 41 TAAAACTTTTAAGGGTTTTCTATGTTCTTCCTACCTGTTAA TAAAACTTTTAAGGGTTTTCTGTGTTCTTCCTACCTGTTAA < 41bp 0.824308880087004 0.472065025221921 0.2806388 0.26610714 prediction 0.648617760174007 Functional Loss - GCA ENSG00000115271 UTR3 Human protein_coding chr2:163216844 chr2:163216845 . . 0 22 hPsi_associated_SNPs_5485 0 0 1 1 0 Ribosome 0.438718592994941 0.438718592874501 0 0 hPsi_site_10902 iPseU_CNN:0;iRNA_PseU:0 10903 chr19 54392929 54392929 1 + A G UCEC 54392928 + 54392908 54392948 41 ACAAGTTCCGCCTGCATAGCTACAGCAGCCCCACCTTCTGC ACAAGTTCCGCCTGCATAGCTGCAGCAGCCCCACCTTCTGC < 41bp 0.824291914579249 0.405332281908766 0.5861394 0.31678146 prediction 0.648583829158497 Functional Loss - PRKCG ENSG00000126583 CDS Human protein_coding chr19:54392928 chr19:54392929 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5486 0 0 0 0 2 Cytosol 0.438859174597671 0.438722284220696 0.1722788 0 hPsi_site_10903 iPseU_CNN:0.1722788;iRNA_PseU:0 10904 chr1 40928866 40928866 1 + A C OV 40928865 + 40928845 40928885 41 GGAAAAGCGTTTTTCCAGATTAGACACCTTAGGCAACATGA GGAAAAGCGTTTTTCCAGATTCGACACCTTAGGCAACATGA < 41bp 0.824250358956659 0.487342681798618 0.59343064 0.35260248 prediction 0.648500717913318 Functional Loss - ZFP69B ENSG00000187801 CDS Human protein_coding chr1:40928865 chr1:40928866 synonymous SNV . 0 22 hPsi_associated_SNPs_5487 0 0 0 0 0 Nucleus 0.438717680754651 0.438898684486241 0.18686128 0 hPsi_site_10904 iPseU_CNN:0.18686128;iRNA_PseU:0 10905 chr22 45255677 45255677 1 + A C rs139756068 45255676 + 45255656 45255696 41 GGAGCCTCCCAGAGCACAACTACGTCGTCCTCCGCTACCTC GGAGCCTCCCAGAGCACAACTCCGTCGTCCTCCGCTACCTC < 41bp 0.868630620750442 0.544390507204195 0.4846489 0.21799952 prediction 0.648480227092495 Functional Loss - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45255676 chr22:45255677 nonsynonymous SNV 0.337 3 22 hPsi_associated_SNPs_5488 0 0 1 9 2 unknown 0.438723983181546 0.438478791444773 0 0 hPsi_site_10905 iPseU_CNN:0;iRNA_PseU:0 10906 chr2 219563856 219563856 1 + A G LUSC 219563855 + 219563835 219563875 41 CTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGA CTGGCAGCTGCAGTGCCCAGTGTGACCCAGCTGCTTGGAGA < 41bp 0.824209227273852 0.408642170556654 0.8498559 0.6688356 prediction 0.648418454547704 Functional Loss - STK36 ENSG00000163482 CDS Human protein_coding chr2:219563855 chr2:219563856 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_5489 0 0 1 0 0 chromatin 0.438718626483354 0.438790681264849 0.3620406 0 hPsi_site_10906 iPseU_CNN:0.3620406;iRNA_PseU:0 10907 chr1 201777932 201777932 1 + A C BLCA 201777931 + 201777911 201777951 41 GGTCCCTGGATCATCTGCATTATCTTCCCCACGCCGCTCCC GGTCCCTGGATCATCTGCATTCTCTTCCCCACGCCGCTCCC < 41bp 0.860659771795545 0.536465020529047 0.5629548 0.40873343 prediction 0.648389502532998 Functional Loss - NAV1 ENSG00000134369 CDS Human protein_coding chr1:201777931 chr1:201777932 nonsynonymous SNV 0.061 0 22 hPsi_associated_SNPs_5490 0 0 0 0 1 Nucleus 0.438719301220725 0.438718591541203 0.1259096 0 hPsi_site_10907 iPseU_CNN:0.1259096;iRNA_PseU:0 10908 chr12 51065097 51065097 1 + T G LUAD 51065096 + 51065076 51065116 41 ATTCAGGGATCGTCCACTTCTTCATCCGCATCTTCTACGCT ATTCAGGGATCGTCCACTTCTGCATCCGCATCTTCTACGCT < 41bp 0.830123910922764 0.505943458535904 0.5616013 0.34684783 prediction 0.648360904773721 Functional Loss - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51065096 chr12:51065097 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5491 0 0 1 0 1 Nucleus 0.438717535003395 0.438718521905649 0.1232026 0 hPsi_site_10908 iPseU_CNN:0.1232026;iRNA_PseU:0 10909 chr14 89305901 89305901 1 + A G LUSC 89305900 + 89305880 89305920 41 ATGATGCTGGATGAAAATGCTATAGCTCAAGTTCCACGTAA ATGATGCTGGATGAAAATGCTGTAGCTCAAGTTCCACGTAA < 41bp 0.824178485371391 0.436300475766639 0.68352747 0.53059727 prediction 0.648356970742782 Functional Loss - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89305900 chr14:89305901 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5492 0 0 1 0 1 Nucleus 0.438718032193932 0.438705289236297 0.3058604 0 hPsi_site_10909 iPseU_CNN:0.3058604;iRNA_PseU:0 10910 chr12 88440619 88440619 1 + A G LUAD 88440618 + 88440598 88440638 41 AAACATCCATTACATCTTCTTATACCACATGGAGCATTTCA AAACATCCATTACATCTTCTTGTACCACATGGAGCATTTCA < 41bp 0.82417279729529 0.42954530665714 0.4241874 0.2633018 prediction 0.648345594590581 Functional Loss - C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88440618 chr12:88440619 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5493 0 0 1 1 0 Cytosol 0.447087464138636 0.470870309372608 0 0 hPsi_site_10910 iPseU_CNN:0;iRNA_PseU:0 10911 chrX 101818154 101818154 1 + A G STAD 101818153 + 101818133 101818173 41 AGCTGACCCTGAACAAATGATATGATGTCTCCCAGCAAGCT AGCTGACCCTGAACAAATGATGTGATGTCTCCCAGCAAGCT < 41bp 0.900652160381206 0.57653063942361 0.48602176 0.34324265 prediction 0.648243041915193 Functional Loss - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101818153 chrX:101818154 . . 0 22 hPsi_associated_SNPs_5494 0 0 0 0 1 unknown 0.438654662396821 0.438672295548139 0 0 hPsi_site_10911 iPseU_CNN:0;iRNA_PseU:0 10912 chr1 1104438 1104438 1 + T C STAD 1104439 - 1104419 1104459 41 TGGACGGTTTTACCAGACAGTATTAGACAGAGGGCCAGGTC TGGACGGTTTTACCAGACAGTGTTAGACAGAGGGCCAGGTC < 41bp 0.845299420325676 0.521199937051879 0.6472345 0.28516483 prediction 0.648198966547593 Functional Loss - MIR429 ENSG00000198976 ncRNA_exonic Human miRNA chr1:1104439 chr1:1104438 . . 0 22 hPsi_associated_SNPs_5495 0 0 0 0 0 unknown 0.43871966285101 0.438710571316759 0.294469 0 hPsi_site_10912 iPseU_CNN:0.294469;iRNA_PseU:0 10913 chr11 66626561 66626561 1 + A G STAD 66626560 + 66626540 66626580 41 GCGAAGATGAGACCCTCATCTACCGGTGAGGATGCGTGCCC GCGAAGATGAGACCCTCATCTGCCGGTGAGGATGCGTGCCC < 41bp 0.824094320710341 0.431126349314711 0.55009973 0.23999336 prediction 0.648188641420682 Functional Loss - LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66626560 chr11:66626561 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5496 0 0 0 0 1 Ribosome 0.438717912530107 0.43875356486498 0.10019946 0 hPsi_site_10913 iPseU_CNN:0.10019946;iRNA_PseU:0 10914 chr3 113804641 113804641 1 + A G UCEC 113804640 + 113804620 113804660 41 CTGCTGGCCGGAGTCCTGCTTATGATGCACAACTTTGAACA CTGCTGGCCGGAGTCCTGCTTGTGATGCACAACTTTGAACA < 41bp 0.892523638723599 0.568431744820225 0.33025187 0.24960282 prediction 0.648183787806748 Functional Loss - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113804640 chr3:113804641 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5497 0 0 1 0 0 Nucleus 0.446151583701005 0.477578299092424 0 0 hPsi_site_10914 iPseU_CNN:0;iRNA_PseU:0 10915 chr20 18162401 18162401 1 + T G COAD 18162400 + 18162380 18162420 41 TCGACACCAGACCACCAAGTTTTTGTATCGCTTGGTAGGAT TCGACACCAGACCACCAAGTTGTTGTATCGCTTGGTAGGAT < 41bp 0.838156561530499 0.514079438103134 0.31908858 0.29215288 prediction 0.64815424685473 Functional Loss - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18162400 chr20:18162401 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_5498 0 0 1 0 2 Nucleus 0.438718592995609 0.438718699322976 0 0 hPsi_site_10915 iPseU_CNN:0;iRNA_PseU:0 10916 chr11 118851267 118851267 1 + T G UCEC 118851266 + 118851246 118851286 41 ACTGTCCGTCACAATCTCTGTTTTCGAGACAGCTTTGAGAA ACTGTCCGTCACAATCTCTGTGTTCGAGACAGCTTTGAGAA < 41bp 0.824070121474962 0.488855412355515 0.6512209 0.32531047 prediction 0.648140242949924 Functional Loss - FOXR1 ENSG00000176302 CDS Human protein_coding chr11:118851266 chr11:118851267 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_5499 0 0 0 0 1 unknown 0.439359214229206 0.437661045423434 0.3024418 0 hPsi_site_10916 iPseU_CNN:0.3024418;iRNA_PseU:0 10917 chr1 11072705 11072705 1 + A C rs545055968 11072704 + 11072684 11072724 41 GCGGGGGGAGGAGGCGGCCCTAGCGCCATTTTGTGGGAGCG GCGGGGGGAGGAGGCGGCCCTCGCGCCATTTTGTGGGAGCG < 41bp 0.83045288528559 0.506388013212616 0.25992396 0.21971586 prediction 0.648129744145948 Functional Loss - TARDBP ENSG00000120948 UTR5 Human protein_coding chr1:11072704 chr1:11072705 . . 0 22 hPsi_associated_SNPs_5500 0 0 1 0 1 Cytosol 0.43871859299494 0.438718104150669 0 0 hPsi_site_10917 iPseU_CNN:0;iRNA_PseU:0 10918 chr17 73258685 73258685 1 + A G COAD 73258684 + 73258664 73258704 41 AGCTAACTGAGGAGGAGAAATATGTTCGGGAGCTCAAGAAG AGCTAACTGAGGAGGAGAAATGTGTTCGGGAGCTCAAGAAG < 41bp 0.89429607679574 0.570232414483135 0.34299093 0.3134002 prediction 0.648127324625208 Functional Loss - MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73258684 chr17:73258685 nonsynonymous SNV 0.938 1 22 hPsi_associated_SNPs_5501 0 0 1 0 1 Ribosome 0.438691534970668 0.438697151383431 0 0 hPsi_site_10918 iPseU_CNN:0;iRNA_PseU:0 10919 chr4 78830457 78830457 1 + A G LUAD 78830456 + 78830436 78830476 41 CATCCCCAAAATGCTTGAATTATTTAAAAATGGACATGAAA CATCCCCAAAATGCTTGAATTGTTTAAAAATGGACATGAAA < 41bp 0.824063053494769 0.433281609910357 0.30768314 0.28685886 prediction 0.648126106989538 Functional Loss - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78830456 chr4:78830457 synonymous SNV . 0 22 hPsi_associated_SNPs_5502 0 0 0 0 2 Ribosome 0.438717003877523 0.438718768912548 0 0 hPsi_site_10919 iPseU_CNN:0;iRNA_PseU:0 10920 chr2 118586976 118586976 1 + A G STAD 118586975 + 118586955 118586995 41 CTGAAACAGATCTTTAATGTTAATAACCTAAATTTGCCTCA CTGAAACAGATCTTTAATGTTGATAACCTAAATTTGCCTCA < 41bp 0.824028355255399 0.441152708170279 0.4065574 0.29616433 prediction 0.648056710510798 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118586975 chr2:118586976 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_5503 0 0 1 0 1 Nucleus 0.438736485812579 0.438794249921568 0 0 hPsi_site_10920 iPseU_CNN:0;iRNA_PseU:0 10921 chr14 21961156 21961156 1 + A G UCEC 21961155 + 21961135 21961175 41 CCCCCGACTCAGCAGCAAGTTACCATTCTGCAGCAGCCTCC CCCCCGACTCAGCAGCAAGTTGCCATTCTGCAGCAGCCTCC < 41bp 0.907073833901686 0.583049067295062 0.6255707 0.33062464 prediction 0.648049533213247 Functional Loss - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961155 chr14:21961156 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_5504 0 0 1 0 0 Ribosome 0.438689723491924 0.438648903917369 0.2511414 0 hPsi_site_10921 iPseU_CNN:0.2511414;iRNA_PseU:0 10922 chr10 96361328 96361328 1 + A G THCA 96361327 + 96361307 96361347 41 AATTAAAGAGAAGATGGGGATATTCAAGATATTAGAAAATT AATTAAAGAGAAGATGGGGATGTTCAAGATATTAGAAAATT < 41bp 0.824022377932493 0.453158902768827 0.33497483 0.22177115 prediction 0.648044755864985 Functional Loss - HELLS ENSG00000119969 CDS Human protein_coding chr10:96361327 chr10:96361328 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5505 0 0 1 0 1 Cytosol 0.438718592994843 0.438718592985274 0 0 hPsi_site_10922 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10923 chr19 10781711 10781711 1 + A G STAD 10781710 + 10781690 10781730 41 TGGCAAAGCATTCTTCCGTTTATCCAACACAAGAGGAGCTG TGGCAAAGCATTCTTCCGTTTGTCCAACACAAGAGGAGCTG < 41bp 0.823997061135344 0.410803759390815 0.7611965 0.43341035 prediction 0.647994122270688 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10781710 chr19:10781711 nonsynonymous SNV 0.046 4 22 hPsi_associated_SNPs_5506 0 0 1 0 0 Cytosol 0.438811029430142 0.43896405503775 0.522393 0 hPsi_site_10923 iPseU_CNN:0.522393;iRNA_PseU:0 10924 chr17 40947322 40947322 1 + T C OV 40947323 - 40947303 40947343 41 GGGAGGGGGAAGGGGCAGGCTAGGGAGGGGACTAGGAGGGG GGGAGGGGGAAGGGGCAGGCTGGGGAGGGGACTAGGAGGGG < 41bp 0.869985670720924 0.546026401522669 0.2825231 0.19876328 prediction 0.647918538396511 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947323 chr17:40947322 synonymous SNV . 0 22 hPsi_associated_SNPs_5507 0 0 1 0 0 chromatin 0.438704400826873 0.438718593004302 0 0 hPsi_site_10924 iPseU_CNN:0;iRNA_PseU:0 10925 chr4 90816360 90816360 1 + A C CESC 90816359 + 90816339 90816379 41 ACTTCTGAAGACAGTCTTCTTAAATCAACACTGCCTCCCTC ACTTCTGAAGACAGTCTTCTTCAATCAACACTGCCTCCCTC < 41bp 0.823926928486669 0.475795585403092 0.4489664 0.3853874 prediction 0.647853856973338 Functional Loss - MMRN1 ENSG00000138722 CDS Human protein_coding chr4:90816359 chr4:90816360 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5508 0 0 0 0 0 cytosol 0.438718785854676 0.438768202484734 0 0 hPsi_site_10925 iPseU_CNN:0;iRNA_PseU:0 10926 chr8 143784650 143784650 1 + A G rs141724373 143784649 + 143784629 143784669 41 TCAAGTGTTGTAAAATTCGCTACTGCAATTTAGAGGGGCCA TCAAGTGTTGTAAAATTCGCTGCTGCAATTTAGAGGGGCCA < 41bp 0.884945926505938 0.561031869915354 0.2925961 0.26287466 prediction 0.647828113181167 Functional Loss - LY6K ENSG00000160886 CDS Human protein_coding chr8:143784649 chr8:143784650 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5509 0 0 1 0 0 nucleus 0.438714137800523 0.43871854217976 0 0 hPsi_site_10926 iPseU_CNN:0;iRNA_PseU:0 10927 chr2 177036449 177036449 1 + A G COAD 177036448 + 177036428 177036468 41 TCCAGAACCGGCGCATGAAGTACAAGAAGGACCAGAAGGCC TCCAGAACCGGCGCATGAAGTGCAAGAAGGACCAGAAGGCC < 41bp 0.902617318835046 0.578705626202943 0.58932084 0.30583933 prediction 0.647823385264207 Functional Loss - HOXD3 ENSG00000128652 CDS Human protein_coding chr2:177036448 chr2:177036449 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5510 0 0 0 0 0 exosome 0.438718097932858 0.43871837986909 0.17864168 0 hPsi_site_10927 iPseU_CNN:0.17864168;iRNA_PseU:0 10928 chr2 95539132 95539132 1 + A G THCA 95539131 + 95539111 95539151 41 CCCAGTGAGAGAGCAGAACTTACACAGTCAGAGCTCAGGCC CCCAGTGAGAGAGCAGAACTTGCACAGTCAGAGCTCAGGCC < 41bp 0.823904096531643 0.428790700016544 0.29873878 0.2050958 prediction 0.647808193063286 Functional Loss - LOC442028 ENSG00000259848 ncRNA_splicing Human transcribed_unprocessed_pseudogene chr2:95539131 chr2:95539132 . . 0 22 hPsi_associated_SNPs_5511 0 0 0 0 0 unknown 0.438698282189081 0.43871747389497 0 0 hPsi_site_10928 iPseU_CNN:0;iRNA_PseU:0 10929 chr2 183608374 183608374 1 + A G rs11681366 183608373 + 183608353 183608393 41 CAGACATCTGTAGTAATCTGTATGTTTTTCAGCCGTCTCTA CAGACATCTGTAGTAATCTGTGTGTTTTTCAGCCGTCTCTA < 41bp 0.823890495897812 0.42699692999006 0.28014827 0.22652945 prediction 0.647780991795624 Functional Loss - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183608373 chr2:183608374 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_5512 0 0 1 1 2 Ribosome 0.438676123448735 0.438573900270204 0 0 hPsi_site_10929 iPseU_CNN:0;iRNA_PseU:0 10930 chr4 188924594 188924594 1 + T G GBM 188924593 + 188924573 188924613 41 CCTGAGAAAGCATCTCCTCATTCATGGTCCCCGAGACCACG CCTGAGAAAGCATCTCCTCATGCATGGTCCCCGAGACCACG < 41bp 0.823888634480891 0.487522680419972 0.2954616 0.24055463 prediction 0.647777268961782 Functional Loss - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924593 chr4:188924594 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_5513 0 0 0 0 0 Nucleus 0.438350333060936 0.438718451980658 0 0 hPsi_site_10930 iPseU_CNN:0;iRNA_PseU:0 10931 chr1 53541610 53541610 1 + A G LUAD 53541609 + 53541589 53541629 41 CCAACTATCTCACCAAGATCTATGGGCTCACCTTTGGCCAG CCAACTATCTCACCAAGATCTGTGGGCTCACCTTTGGCCAG < 41bp 0.823868786790146 0.409162044160713 0.7852458 0.5882512 prediction 0.647737573580293 Functional Loss - PODN ENSG00000174348 CDS Human protein_coding chr1:53541609 chr1:53541610 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5514 0 0 0 0 2 Cytosol 0.438718838197561 0.438719605607994 0.3939892 0 hPsi_site_10931 iPseU_CNN:0.3939892;iRNA_PseU:0 10932 chr12 48527121 48527121 1 + A G UCEC 48527120 + 48527100 48527140 41 AAGATCACAGATGAGGAGGCTACGAAGTCCAGCTACCTGAA AAGATCACAGATGAGGAGGCTGCGAAGTCCAGCTACCTGAA < 41bp 0.823867817515279 0.478126817661171 0.36004168 0.32530224 prediction 0.647735635030559 Functional Loss - PFKM ENSG00000152556 CDS Human protein_coding chr12:48527120 chr12:48527121 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_5515 0 0 1 0 1 Nucleus 0.438719405799888 0.43871884898414 0 0 hPsi_site_10932 iPseU_CNN:0;iRNA_PseU:0 10933 chrX 152037459 152037459 1 + A G PRAD 152037458 + 152037438 152037478 41 CTACTACCTGGCCCTCCTGCTATCCCTGCTGGTGATGGTGA CTACTACCTGGCCCTCCTGCTGTCCCTGCTGGTGATGGTGA < 41bp 0.823842351589616 0.4172197024651 0.5017806 0.19365838 prediction 0.647684703179232 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037458 chrX:152037459 synonymous SNV . 0 22 hPsi_associated_SNPs_5516 0 0 1 0 0 Ribosome 0.439230480582393 0.440805783785253 0.00356120000000004 0 hPsi_site_10933 iPseU_CNN:0.00356120000000004;iRNA_PseU:0 10934 chr9 110092628 110092628 1 + A C rs529199058 110092627 + 110092607 110092647 41 TGTACAAGTATAGGCAGAGTTATTTTCCTGTTTACATTTTT TGTACAAGTATAGGCAGAGTTCTTTTCCTGTTTACATTTTT < 41bp 0.834728939587318 0.51089291644431 0.517277 0.36425626 prediction 0.647672046286015 Functional Loss - RAD23B ENSG00000119318 UTR3 Human protein_coding chr9:110092627 chr9:110092628 . . 0 22 hPsi_associated_SNPs_5517 0 0 1 5 0 Ribosome 0.438718751208357 0.438718592962069 0.034554 0 hPsi_site_10934 iPseU_CNN:0.034554;iRNA_PseU:0 10935 chr4 6969094 6969094 1 + A G LUSC 6969093 + 6969073 6969113 41 CAATGACTTGGGATGGAAGTTATTTGGGAAAGCGCCACTCC CAATGACTTGGGATGGAAGTTGTTTGGGAAAGCGCCACTCC < 41bp 0.904382232956474 0.580547711571301 0.65559196 0.34332633 prediction 0.647669042770345 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6969093 chr4:6969094 synonymous SNV . 0 22 hPsi_associated_SNPs_5518 0 0 1 0 2 Cytosol 0.438718688488452 0.438718718745273 0.31118392 0 hPsi_site_10935 iPseU_CNN:0.31118392;iRNA_PseU:0 10936 chr6 32146373 32146373 1 + A C UCEC 32146372 + 32146352 32146392 41 GGCGCGACCTTCGAATGTAATATATGTTTGGAGACTGCTCG GGCGCGACCTTCGAATGTAATCTATGTTTGGAGACTGCTCG < 41bp 0.824163213945605 0.500380188221977 0.6847521 0.67136544 prediction 0.647566051447255 Functional Loss - RNF5 ENSG00000204308 CDS Human protein_coding chr6:32146372 chr6:32146373 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5519 0 0 0 0 1 Ribosome 0.438698281173623 0.438751297765677 0.02677332 0 hPsi_site_10936 iPseU_CNN:0.02677332;iRNA_PseU:0 10937 chr12 58109727 58109727 1 + A G UCEC 58109726 + 58109706 58109746 41 CTTCCCTACAGCCTGAGGAGTACATGGCCTACGTTCAGAGG CTTCCCTACAGCCTGAGGAGTGCATGGCCTACGTTCAGAGG < 41bp 0.823774227299451 0.412415364276699 0.5748582 0.24043012 prediction 0.647548454598902 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58109726 chr12:58109727 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5520 0 0 1 0 1 Nucleus 0.438718954978444 0.43871859680746 0.1497164 0 hPsi_site_10937 iPseU_CNN:0.1497164;iRNA_PseU:0 10938 chr4 25353283 25353283 1 + T G UCEC 25353282 + 25353262 25353302 41 AATCCCGAATTTGTCAGTTTTTTCCAAGCTTCCAGATGCTG AATCCCGAATTTGTCAGTTTTGTCCAAGCTTCCAGATGCTG < 41bp 0.82696755262026 0.503202823271081 0.33069795 0.27646106 prediction 0.647529458698359 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25353282 chr4:25353283 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5521 0 0 1 0 2 chromatin 0.438718570918111 0.438718580484765 0 0 hPsi_site_10938 iPseU_CNN:0;iRNA_PseU:0 10939 chrX 23413840 23413840 1 + A G rs756356097 23413839 + 23413819 23413859 41 AAATGAAGCTAAAACCTGGTTACATTTGAAGCAAATATCTA AAATGAAGCTAAAACCTGGTTGCATTTGAAGCAAATATCTA < 41bp 0.868505483567698 0.544748690702552 0.8249604 0.37429178 prediction 0.647513585730293 Functional Loss - PTCHD1 ENSG00000165186 UTR3 Human protein_coding chrX:23413839 chrX:23413840 . . 0 22 hPsi_associated_SNPs_5522 0 0 0 0 0 exosome 0.438934767094692 0.438833197236739 0.6499208 0 hPsi_site_10939 iPseU_CNN:0.6499208;iRNA_PseU:0 10940 chr10 7774410 7774410 1 + A G COAD 7774409 + 7774389 7774429 41 TCACCAGGAAACTGTGGGCCTATCTAACCATCAACCAACTG TCACCAGGAAACTGTGGGCCTGTCTAACCATCAACCAACTG < 41bp 0.823730299185499 0.409115258803166 0.5643554 0.2890805 prediction 0.647460598370999 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7774409 chr10:7774410 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_5523 0 0 1 0 1 cytosol 0.438855951959947 0.438781203083805 0.1287108 0 hPsi_site_10940 iPseU_CNN:0.1287108;iRNA_PseU:0 10941 chr19 35175208 35175208 1 + A G rs2290652 35175207 + 35175187 35175227 41 TATCAACAAAGAAGGATATTTATGATGAAGATTCACCCCAA TATCAACAAAGAAGGATATTTGTGATGAAGATTCACCCCAA < 41bp 0.823689295716794 0.435838174077977 0.57640356 0.3812303 prediction 0.647378591433589 Functional Loss - ZNF302 ENSG00000089335 CDS Human protein_coding chr19:35175207 chr19:35175208 nonsynonymous SNV 0.722 2 22 hPsi_associated_SNPs_5524 0 0 1 0 1 exosome 0.438718570567462 0.438718601405256 0.15280712 0 hPsi_site_10941 iPseU_CNN:0.15280712;iRNA_PseU:0 10942 chr14 24675755 24675755 1 + A G rs34083933 24675754 + 24675734 24675774 41 ACAAGTACCTCATCAACTTCTATCGGGCCATTGAGAGCACA ACAAGTACCTCATCAACTTCTGTCGGGCCATTGAGAGCACA < 41bp 0.889269388099868 0.565597144612957 0.9313522 0.8526068 prediction 0.647344486973821 Functional Loss - TSSK4 ENSG00000139908 CDS Human protein_coding chr14:24675754 chr14:24675755 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5525 0 0 0 0 1 nucleus 0.438718738364084 0.43871888907773 0.1574908 0 hPsi_site_10942 iPseU_CNN:0.1574908;iRNA_PseU:0 10943 chr7 150841027 150841027 1 + A G LUAD 150841026 + 150841006 150841046 41 GCACCGTAGTCCTAGCCTCCTATAAGGCCCAGGAAGAGGGC GCACCGTAGTCCTAGCCTCCTGTAAGGCCCAGGAAGAGGGC < 41bp 0.893066176648657 0.569410053681812 0.3191777 0.32550192 prediction 0.64731224593369 Functional Loss - AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150841026 chr7:150841027 synonymous SNV . 0 22 hPsi_associated_SNPs_5526 0 0 1 0 0 Cytosol 0.438718592995079 0.43871859299495 0 0 hPsi_site_10943 iPseU_CNN:0;iRNA_PseU:0 10944 chr11 5020416 5020416 1 + A G rs2445290 5020415 + 5020395 5020435 41 GTATTACTTTATTTCCATCTTAGCAGTGAATGACCTGGGGA GTATTACTTTATTTCCATCTTGGCAGTGAATGACCTGGGGA < 41bp 0.876956832605695 0.553301029802696 0.12417722 0.0828079 prediction 0.647311605605998 Functional Loss - OR51L1 ENSG00000176798 CDS Human protein_coding chr11:5020415 chr11:5020416 synonymous SNV . 0 22 hPsi_associated_SNPs_5527 0 0 0 0 0 unknown 0.438716688403942 0.439984155905969 0 0 hPsi_site_10944 iPseU_CNN:0;iRNA_PseU:0 10945 chr3 186390598 186390598 1 + A G UCEC 186390597 + 186390577 186390617 41 GAGGAGGGGAAGGAACTGGTTACTTCGTGGACTTCTCTGTG GAGGAGGGGAAGGAACTGGTTGCTTCGTGGACTTCTCTGTG < 41bp 0.823652990790184 0.409736031964535 0.7817803 0.36029547 prediction 0.647305981580368 Functional Loss - HRG ENSG00000113905 CDS Human protein_coding chr3:186390597 chr3:186390598 nonsynonymous SNV 0.077 3 22 hPsi_associated_SNPs_5528 0 0 0 0 2 exosome 0.438795718764467 0.43872364643942 0.5635606 0 hPsi_site_10945 iPseU_CNN:0.5635606;iRNA_PseU:0 Choreoacanthocytosis Choreoacanthocytosis 10946 chr3 44906746 44906746 1 + A G rs10429 44906745 + 44906725 44906765 41 TGGGATGTCATGTGGGACTGTATCCTAGGGCGATCCAGTTG TGGGATGTCATGTGGGACTGTGTCCTAGGGCGATCCAGTTG < 41bp 0.823650570090695 0.44088793850419 0.34436542 0.23597696 prediction 0.64730114018139 Functional Loss - TMEM42 ENSG00000169964 UTR3 Human protein_coding chr3:44906745 chr3:44906746 . . 0 22 hPsi_associated_SNPs_5529 0 0 0 0 0 exosome 0.43760791369507 0.436449155118986 0 0 hPsi_site_10946 iPseU_CNN:0;iRNA_PseU:0 Choreoacanthocytosis Choreoacanthocytosis 10947 chr2 139318436 139318436 1 + A G COAD 139318435 + 139318415 139318455 41 AAGAAATGATGAGATTCATTTACACAGGGAGAGCACCAAAC AAGAAATGATGAGATTCATTTGCACAGGGAGAGCACCAAAC < 41bp 0.823635888997996 0.429268954497767 0.32799572 0.2378571 prediction 0.647271777995992 Functional Loss - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139318435 chr2:139318436 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5530 0 0 1 0 2 chromatin 0.438718427343221 0.438717999054118 0 0 hPsi_site_10947 iPseU_CNN:0;iRNA_PseU:0 10948 chrX 129148036 129148036 1 + A G HNSC 129148035 + 129148015 129148055 41 CCTGCAGCTCAGGCACCAGCTATGCAAAAAGTCCCCCTGTC CCTGCAGCTCAGGCACCAGCTGTGCAAAAAGTCCCCCTGTC < 41bp 0.823623451731065 0.404442590867912 0.44492108 0.3595492 prediction 0.647246903462129 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148035 chrX:129148036 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5531 0 0 1 0 0 Cytosol 0.438680202731051 0.438288344629208 0 0 hPsi_site_10948 iPseU_CNN:0;iRNA_PseU:0 10949 chr9 127615705 127615705 1 + A G rs10986467 127615704 + 127615684 127615724 41 GCCGCACGCCCCGCCCCGATTACCATGGAGACCGCCTGTAC GCCGCACGCCCCGCCCCGATTGCCATGGAGACCGCCTGTAC < 41bp 0.823622044656376 0.448881594612795 0.8136506 0.3597359 prediction 0.647244089312752 Functional Loss - WDR38 ENSG00000136918 upstream Human protein_coding chr9:127615704 chr9:127615705 . . 0 22 hPsi_associated_SNPs_5532 0 0 0 0 0 nucleolus 0.438892766122088 0.439241461404604 0.6273012 0 hPsi_site_10949 iPseU_CNN:0.6273012;iRNA_PseU:0 10950 chr14 23341328 23341328 1 + A G rs56248501 23341327 + 23341307 23341347 41 TTGGCGAAAGGCACCGCCCCTACTCCCGGGCTGCCGCCGCC TTGGCGAAAGGCACCGCCCCTGCTCCCGGGCTGCCGCCGCC < 41bp 0.823589869201477 0.498833988258248 0.3396953 0.23058265 prediction 0.647179738402955 Functional Loss - LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341327 chr14:23341328 . . 0 22 hPsi_associated_SNPs_5533 0 0 1 0 0 Ribosome 0.438718599135595 0.438718599984716 0 0 hPsi_site_10950 iPseU_CNN:0;iRNA_PseU:0 10951 chrX 48678654 48678654 1 + A G UCEC 48678653 + 48678633 48678673 41 GCCAGTGGCCGCATTATCCTTATCCTAGAGGTAACTTTCTC GCCAGTGGCCGCATTATCCTTGTCCTAGAGGTAACTTTCTC < 41bp 0.823585847805435 0.412093358526803 0.32985973 0.31494012 prediction 0.647171695610869 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678653 chrX:48678654 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_5534 0 0 1 0 1 Cytosol 0.438718582467297 0.438718589145924 0 0 hPsi_site_10951 iPseU_CNN:0;iRNA_PseU:0 10952 chr5 149581986 149581986 1 + A G STAD 149581985 + 149581965 149582005 41 GGCTCCTCACCTTTGCCTCCTACAACACGTTTCACCAGAAC GGCTCCTCACCTTTGCCTCCTGCAACACGTTTCACCAGAAC < 41bp 0.902889433924641 0.579315570242506 0.8187969 0.48226887 prediction 0.64714772736427 Functional Loss - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149581985 chr5:149581986 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5535 0 0 0 0 2 exosome 0.438717703040071 0.438718599812361 0.6375938 0 hPsi_site_10952 iPseU_CNN:0.6375938;iRNA_PseU:0 10953 chr1 17930045 17930045 1 + A G UCEC 17930044 + 17930024 17930064 41 CCCTGGAAGAGGATGTGATTTATGACGACGTCCCCTGCGAG CCCTGGAAGAGGATGTGATTTGTGACGACGTCCCCTGCGAG < 41bp 0.885107086877193 0.561541335604096 0.8725837 0.7125774 prediction 0.647131502546194 Functional Loss - ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17930044 chr1:17930045 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5536 0 0 1 0 2 Nucleus 0.438718899451666 0.438715514333513 0.3200126 0 hPsi_site_10953 iPseU_CNN:0.3200126;iRNA_PseU:0 10954 chr19 7614968 7614968 1 + T G LUAD 7614967 + 7614947 7614987 41 GAGCCCAACGCGACTGCACCTTCCTGCGGATCTCCAAGTCC GAGCCCAACGCGACTGCACCTGCCTGCGGATCTCCAAGTCC < 41bp 0.823560213323508 0.488024615032205 0.5070404 0.22009447 prediction 0.647120426647016 Functional Loss - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7614967 chr19:7614968 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_5537 0 0 1 0 1 Ribosome 0.438717396978781 0.438719378921683 0.0140807999999999 0 hPsi_site_10954 iPseU_CNN:0.0140807999999999;iRNA_PseU:0 10955 chr22 19502292 19502292 1 + A G UCEC 19502291 + 19502271 19502311 41 GGAGTAACCTGGACAAGCTGTACCATGGCCTGGAACTCGCC GGAGTAACCTGGACAAGCTGTGCCATGGCCTGGAACTCGCC < 41bp 0.823535109834848 0.404072236451203 0.7802582 0.37134457 prediction 0.647070219669696 Functional Loss - CDC45 ENSG00000093009 CDS Human protein_coding chr22:19502291 chr22:19502292 nonsynonymous SNV 0.248 1 22 hPsi_associated_SNPs_5538 0 0 1 0 1 Ribosome 0.438720437679579 0.438711847322316 0.5605164 0 hPsi_site_10955 iPseU_CNN:0.5605164;iRNA_PseU:0 10956 chr3 113330953 113330953 1 + A G rs16861233 113330952 + 113330932 113330972 41 GGTGTTTGGAAAAAATGACGTATGGTTCTGGGTCATCTTCT GGTGTTTGGAAAAAATGACGTGTGGTTCTGGGTCATCTTCT < 41bp 0.823530831565018 0.398462114668693 0.5353594 0.45202282 prediction 0.647061663130037 Functional Loss - SIDT1 ENSG00000072858 CDS Human protein_coding chr3:113330952 chr3:113330953 synonymous SNV . 0 22 hPsi_associated_SNPs_5539 0 0 0 0 1 exosome 0.438718164733743 0.438715592840036 0.0707188000000001 0 hPsi_site_10956 iPseU_CNN:0.0707188000000001;iRNA_PseU:0 10957 chr15 78882800 78882800 1 + T G UCEC 78882799 + 78882779 78882819 41 CGCCTTTGGTCCGCAAGATATTTCTTCACACGCTTCCCAAA CGCCTTTGGTCCGCAAGATATGTCTTCACACGCTTCCCAAA < 41bp 0.825011843245012 0.501484755396954 0.60568976 0.38167855 prediction 0.647054175696116 Functional Loss - CHRNA5 ENSG00000169684 CDS Human protein_coding chr15:78882799 chr15:78882800 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_5540 0 0 1 0 0 nucleus 0.438716989940904 0.438718461011893 0.21137952 0 hPsi_site_10957 iPseU_CNN:0.21137952;iRNA_PseU:0 10958 chrX 123506200 123506200 1 + A G rs180756712 123506199 + 123506179 123506219 41 TTTGTGATTTTGTGATTGATTATATGTCACTTTGCTACAGG TTTGTGATTTTGTGATTGATTGTATGTCACTTTGCTACAGG < 41bp 0.823524820173918 0.459752251456795 0.33765024 0.25706047 prediction 0.647049640347836 Functional Loss - SH2D1A ENSG00000183918 UTR3 Human protein_coding chrX:123506199 chrX:123506200 . . 0 22 hPsi_associated_SNPs_5541 0 0 0 4 0 exosome 0.439240198366202 0.434523880480194 0 0 hPsi_site_10958 iPseU_CNN:0;iRNA_PseU:0 10959 chr3 44441957 44441957 1 + A C LIHC 44441956 + 44441936 44441976 41 AGTTGTTTATATTGAAGAATTACAGCCAGTATTGACACTTG AGTTGTTTATATTGAAGAATTCCAGCCAGTATTGACACTTG < 41bp 0.823523065938138 0.472675452472798 0.24053279 0.22171947 prediction 0.647046131876277 Functional Loss - TCAIM ENSG00000179152 CDS Human protein_coding chr3:44441956 chr3:44441957 nonsynonymous SNV 0.739 0 22 hPsi_associated_SNPs_5542 0 0 1 0 0 Cytosol 0.438718597933388 0.438718592995838 0 0 hPsi_site_10959 iPseU_CNN:0;iRNA_PseU:0 10960 chr3 182987804 182987804 1 + A G UCEC 182987803 + 182987783 182987823 41 ACACCTCAGCGGGGCCTCGCTACCAATACTTGATTAACCAC ACACCTCAGCGGGGCCTCGCTGCCAATACTTGATTAACCAC < 41bp 0.823507196270818 0.420560497679601 0.20167044 0.13683775 prediction 0.647014392541636 Functional Loss - B3GNT5 ENSG00000176597 CDS Human protein_coding chr3:182987803 chr3:182987804 nonsynonymous SNV 0.663 2 22 hPsi_associated_SNPs_5543 0 0 1 0 0 Cytosol 0.438685070950772 0.43871778909082 0 0 hPsi_site_10960 iPseU_CNN:0;iRNA_PseU:0 10961 chr10 13214704 13214704 1 + T G UCEC 13214703 + 13214683 13214723 41 AACATGCTTTTCTGCGGAGCTTGATGTCCCTGCGCTACCAA AACATGCTTTTCTGCGGAGCTGGATGTCCCTGCGCTACCAA < 41bp 0.823499654160475 0.488348933347724 0.34580576 0.28740424 prediction 0.64699930832095 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13214703 chr10:13214704 synonymous SNV . 0 22 hPsi_associated_SNPs_5544 0 0 1 0 3 Nucleus 0.438717676465165 0.438718592993054 0 0 hPsi_site_10961 iPseU_CNN:0;iRNA_PseU:0 10962 chr17 4060602 4060602 1 + A C rs190648638 4060601 + 4060581 4060621 41 ACTGGTCAGCTTTTCAACACTATTCCCTTTGACCTACTGGC ACTGGTCAGCTTTTCAACACTCTTCCCTTTGACCTACTGGC < 41bp 0.849347492858727 0.525848020460853 0.6475939 0.54683983 prediction 0.646998944795748 Functional Loss - CYB5D2 ENSG00000167740 UTR3 Human protein_coding chr17:4060601 chr17:4060602 . . 0 22 hPsi_associated_SNPs_5545 0 0 1 0 0 Ribosome 0.364700036084803 0.437822138645629 0.20150814 0 hPsi_site_10962 iPseU_CNN:0.20150814;iRNA_PseU:0 10963 chr15 76205575 76205575 1 + A G UCEC 76205574 + 76205554 76205594 41 TCTTACCACATACAGTTCTTTACATGGCTGATTCAGAAACT TCTTACCACATACAGTTCTTTGCATGGCTGATTCAGAAACT < 41bp 0.823495624507091 0.421764925341682 0.7565617 0.4706708 prediction 0.646991249014182 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76205574 chr15:76205575 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5546 0 0 1 0 2 Cytosol 0.438713573365727 0.438713187644679 0.5131234 0 hPsi_site_10963 iPseU_CNN:0.5131234;iRNA_PseU:0 10964 chr5 140736146 140736146 1 + A G rs115115119 140736145 + 140736125 140736165 41 CTCATGCTTCCTACTCTGCTTACATTCCTGAAAACAACCCC CTCATGCTTCCTACTCTGCTTGCATTCCTGAAAACAACCCC < 41bp 0.823454413611824 0.447965222451803 0.74930346 0.44225848 prediction 0.646908827223648 Functional Loss - PCDHGA4 ENSG00000262576 CDS Human protein_coding chr5:140736145 chr5:140736146 nonsynonymous SNV 0.803 2 22 hPsi_associated_SNPs_5547 0 0 0 0 0 exosome 0.433469568406737 0.437955765343064 0.49860692 0 hPsi_site_10964 iPseU_CNN:0.49860692;iRNA_PseU:0 10965 chr8 1728615 1728615 1 + A G UCEC 1728614 + 1728594 1728634 41 TTACGCTAATCATTAATCCATATTGGACCCATAAGAAGACT TTACGCTAATCATTAATCCATGTTGGACCCATAAGAAGACT < 41bp 0.823453683076751 0.429962677738551 0.2622565 0.24270147 prediction 0.646907366153502 Functional Loss - CLN8 ENSG00000182372 CDS Human protein_coding chr8:1728614 chr8:1728615 nonsynonymous SNV 0.100 4 22 hPsi_associated_SNPs_5548 0 0 1 0 0 Endoplasmic reticulum 0.438696197413887 0.438247707700458 0 0 hPsi_site_10965 iPseU_CNN:0;iRNA_PseU:0 10966 chr1 62676992 62676992 1 + A G OV 62676991 + 62676971 62677011 41 GTATTGAAGAATTTAGAGATTATGTTTTGCATATGCCCACC GTATTGAAGAATTTAGAGATTGTGTTTTGCATATGCCCACC < 41bp 0.82345229423199 0.44170703965756 0.5858111 0.4032588 prediction 0.646904588463981 Functional Loss - L1TD1 ENSG00000240563 CDS Human protein_coding chr1:62676991 chr1:62676992 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_5549 0 0 0 0 0 Nucleus 0.439821056969527 0.439149234779335 0.1716222 0 hPsi_site_10966 iPseU_CNN:0.1716222;iRNA_PseU:0 10967 chr3 142430379 142430379 1 + T G UCEC 142430378 + 142430358 142430398 41 ACAAGTTTACCTGTCCTAGATTTAATAGATGCCATTGCACC ACAAGTTTACCTGTCCTAGATGTAATAGATGCCATTGCACC < 41bp 0.823440016883358 0.493754958956643 0.491344 0.4251947 prediction 0.646880033766716 Functional Loss - PLS1 ENSG00000120756 CDS Human protein_coding chr3:142430378 chr3:142430379 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5550 0 0 0 0 2 Nucleus 0.438556862857155 0.438711444644056 0 0 hPsi_site_10967 iPseU_CNN:0;iRNA_PseU:0 10968 chr5 6656207 6656207 1 + A G rs8192208 6656206 + 6656186 6656226 41 TTTAGGTTTTGGCTTGTGGTTAACGGGCATGTTGATAAACA TTTAGGTTTTGGCTTGTGGTTGACGGGCATGTTGATAAACA < 41bp 0.823409467502532 0.427291395470119 0.6037375 0.25090122 prediction 0.646818935005064 Functional Loss - SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6656206 chr5:6656207 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_5551 0 0 1 0 2 Ribosome 0.438715274062576 0.438734004948061 0.207475 0 hPsi_site_10968 iPseU_CNN:0.207475;iRNA_PseU:0 10969 chr11 7507182 7507182 1 + A G rs118163706 7507181 + 7507161 7507201 41 TTTCTGCCCCCGCCGCAGTGTACCCAGGACCCAGCCATGGT TTTCTGCCCCCGCCGCAGTGTGCCCAGGACCCAGCCATGGT < 41bp 0.823403800667822 0.41168923729643 0.34740153 0.16013223 prediction 0.646807601335644 Functional Loss - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7507181 chr11:7507182 nonsynonymous SNV 0.701 1 22 hPsi_associated_SNPs_5552 0 0 0 0 2 exosome 0.438718657133661 0.438733982930131 0 0 hPsi_site_10969 iPseU_CNN:0;iRNA_PseU:0 10970 chr1 42925501 42925501 1 + A C rs142078638 42925500 + 42925480 42925520 41 CTCGGAAACCAAGTTATTGCTATCAGAGGAAGAAATAGAAA CTCGGAAACCAAGTTATTGCTCTCAGAGGAAGAAATAGAAA < 41bp 0.823391187023866 0.480542046947469 0.32406604 0.28537926 prediction 0.646782374047733 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42925500 chr1:42925501 synonymous SNV . 0 22 hPsi_associated_SNPs_5553 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592966509 0 0 hPsi_site_10970 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 10971 chr1 186862181 186862181 1 + A G UCEC 186862180 + 186862160 186862200 41 TATGTGGAACTTTTTATCTCTACAACCCCTGACAGCAGGAA TATGTGGAACTTTTTATCTCTGCAACCCCTGACAGCAGGAA < 41bp 0.823381343182413 0.436300994049389 0.4716484 0.27785358 prediction 0.646762686364826 Functional Loss - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186862180 chr1:186862181 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_5554 0 0 1 0 1 Nucleus 0.438718593482198 0.438718780387889 0 0 hPsi_site_10971 iPseU_CNN:0;iRNA_PseU:0 10972 chr18 61570483 61570483 1 + A G LUAD 61570482 + 61570462 61570502 41 GATCATCCTTTTCTTTTTCTTATTATGCATAAGATAACCAA GATCATCCTTTTCTTTTTCTTGTTATGCATAAGATAACCAA < 41bp 0.823373862355923 0.432026870418315 0.32289103 0.38644552 prediction 0.646747724711847 Functional Loss - SERPINB2 ENSG00000197632 CDS Human protein_coding chr18:61570482 chr18:61570483 nonsynonymous SNV 0.274 3 22 hPsi_associated_SNPs_5555 0 0 1 0 0 exosome 0.438718583522344 0.438718582791874 0 0 hPsi_site_10972 iPseU_CNN:0;iRNA_PseU:0 10973 chr19 12903208 12903208 1 + A G STAD 12903207 + 12903187 12903227 41 CCGTCGGGACCGGGAGCTCGTACCCGACGACCACCATCAGC CCGTCGGGACCGGGAGCTCGTGCCCGACGACCACCATCAGC < 41bp 0.888412989844337 0.565104559201909 0.93144727 0.35334277 prediction 0.646616861284856 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12903207 chr19:12903208 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_5556 0 0 0 0 0 Cytosol 0.437336940417949 0.43873510717206 0.86289454 0 hPsi_site_10973 iPseU_CNN:0.86289454;iRNA_PseU:0 10974 chr8 103265198 103265198 1 + A G rs184672244 103265197 + 103265177 103265217 41 CTTAAGGAAGAAAACAGTGTTATTATGCCACTGAATAAAGC CTTAAGGAAGAAAACAGTGTTGTTATGCCACTGAATAAAGC < 41bp 0.823278490325083 0.465294096402834 0.6141838 0.5041435 prediction 0.646556980650165 Functional Loss - UBR5 ENSG00000246263 ncRNA_exonic Human antisense chr8:103265197 chr8:103265198 . . 0 22 hPsi_associated_SNPs_5557 0 0 0 0 0 Nucleus 0.437958989422662 0.438692878383506 0.2200806 0 hPsi_site_10974 iPseU_CNN:0.2200806;iRNA_PseU:0 10975 chr19 50000542 50000542 1 + A G COAD 50000541 + 50000521 50000561 41 GCAAGGAGAAGCTCCCGCGGTACTACAAGAACATCGGTCTG GCAAGGAGAAGCTCCCGCGGTGCTACAAGAACATCGGTCTG < 41bp 0.905980111394406 0.58271783208874 0.7041842 0.31531942 prediction 0.646524558611332 Functional Loss - RPS11 ENSG00000142534 CDS Human protein_coding chr19:50000541 chr19:50000542 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_5558 0 0 1 0 2 chromatin 0.438718593025854 0.438718595980056 0.4083684 0 hPsi_site_10975 iPseU_CNN:0.4083684;iRNA_PseU:0 10976 chr1 161134637 161134637 1 + T G UCEC 161134636 + 161134616 161134656 41 AGGGCTTAGATCTGAATCGATTTTCTGCCTCCCGAGGCTCC AGGGCTTAGATCTGAATCGATGTTCTGCCTCCCGAGGCTCC < 41bp 0.838986967094561 0.515779439566944 0.6584381 0.38679618 prediction 0.646415055055234 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161134636 chr1:161134637 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_5559 0 0 1 0 1 Cytosol 0.438718592988689 0.438718582746271 0.3168762 0 hPsi_site_10976 iPseU_CNN:0.3168762;iRNA_PseU:0 not specified not specified 10977 chr1 182850418 182850418 1 + A G LIHC 182850417 + 182850397 182850437 41 AGCGTGGGAGATGCTATCTGTACCATTGCTGCTGCTACCTG AGCGTGGGAGATGCTATCTGTGCCATTGCTGCTGCTACCTG < 41bp 0.823190561816602 0.404262034852834 0.71850896 0.48652852 prediction 0.646381123633204 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182850417 chr1:182850418 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5560 0 0 1 0 0 Cytosol 0.438716162626582 0.438721424505644 0.43701792 0 hPsi_site_10977 iPseU_CNN:0.43701792;iRNA_PseU:0 10978 chr1 55144968 55144968 1 + A G rs181242692 55144967 + 55144947 55144987 41 CTTCCTGGGGCCCCAGCAGATAAAGGACCTGCTGCTGGCCG CTTCCTGGGGCCCCAGCAGATGAAGGACCTGCTGCTGGCCG < 41bp 0.823187356324753 0.405014557736786 0.5556265 0.38002056 prediction 0.646374712649506 Functional Loss - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55144967 chr1:55144968 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_5561 0 0 0 0 1 exosome 0.438718577684577 0.438718464676779 0.111253 0 hPsi_site_10978 iPseU_CNN:0.111253;iRNA_PseU:0 10979 chr19 13055024 13055024 1 + A G rs191183059 13055023 + 13055003 13055043 41 TGTCCCCTTCTCTCATCTCTTAGCTCCCCTCCAACCTGGGG TGTCCCCTTCTCTCATCTCTTGGCTCCCCTCCAACCTGGGG < 41bp 0.873725768973621 0.550540892623999 0.36404437 0.17403626 prediction 0.646369752699244 Functional Loss - CALR ENSG00000267458;ENSG00000179218 ncRNA_exonic;splicing Human other chr19:13055023 chr19:13055024 . . 0 22 hPsi_associated_SNPs_5562 0 0 1 0 0 Ribosome 0.438643641588653 0.438718592920208 0 0 hPsi_site_10979 iPseU_CNN:0;iRNA_PseU:0 10980 chr8 42262979 42262979 1 + A G rs147177887 42262978 + 42262958 42262998 41 TGGGATTTGAACTGGAAGCTTAATGTGGTTTGAGGAAAGCA TGGGATTTGAACTGGAAGCTTGATGTGGTTTGAGGAAAGCA < 41bp 0.82318123009636 0.430090799854476 0.43417034 0.3611099 prediction 0.64636246019272 Functional Loss - VDAC3 ENSG00000078668 CDS Human protein_coding chr8:42262978 chr8:42262979 synonymous SNV . 0 22 hPsi_associated_SNPs_5563 0 0 1 0 1 Ribosome 0.435663714244827 0.438718876006023 0 0 hPsi_site_10980 iPseU_CNN:0;iRNA_PseU:0 10981 chr10 131964903 131964903 1 + A G BRCA 131964902 + 131964882 131964922 41 GGCCTACCTATCCTCAGCTCTATGTTTCTGGAGAGCTCATA GGCCTACCTATCCTCAGCTCTGTGTTTCTGGAGAGCTCATA < 41bp 0.823160656300509 0.410450309652933 0.22546354 0.21961847 prediction 0.646321312601017 Functional Loss - GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964902 chr10:131964903 nonsynonymous SNV 0.971 4 22 hPsi_associated_SNPs_5564 0 0 1 2 1 Cytosol 0.437783346818056 0.438396859435078 0 0 hPsi_site_10981 iPseU_CNN:0;iRNA_PseU:0 10982 chr14 45605488 45605488 1 + A G UCEC 45605487 + 45605467 45605507 41 CCGCGGGCGCCCTGTGGATTTACCCTACCAATTGCCCAGTG CCGCGGGCGCCCTGTGGATTTGCCCTACCAATTGCCCAGTG < 41bp 0.823159552438272 0.414246592442748 0.6102646 0.25388402 prediction 0.646319104876544 Functional Loss - FANCM ENSG00000187790 CDS Human protein_coding chr14:45605487 chr14:45605488 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5565 0 0 1 0 0 chromatin 0.43871859365079 0.438718592995127 0.2205292 0 hPsi_site_10982 iPseU_CNN:0.2205292;iRNA_PseU:0 10983 chr7 24727109 24727109 1 + A G UCEC 24727108 + 24727088 24727128 41 GTGCACGGATTCAGAGAGCATACAACCACTATTTTGATTTG GTGCACGGATTCAGAGAGCATGCAACCACTATTTTGATTTG < 41bp 0.823115348965316 0.455700355126206 0.39086357 0.32605594 prediction 0.646230697930632 Functional Loss - MPP6 ENSG00000105926 CDS Human protein_coding chr7:24727108 chr7:24727109 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5566 0 0 1 0 1 Cytosol 0.43871974493092 0.438730008573579 0 0 hPsi_site_10983 iPseU_CNN:0;iRNA_PseU:0 10984 chr15 34520002 34520002 1 + A G GBM 34520001 + 34519981 34520021 41 TTCCCTACTATGATGGTGTGTATGATGGCCTGGCGACCCAT TTCCCTACTATGATGGTGTGTGTGATGGCCTGGCGACCCAT < 41bp 0.88659913255739 0.563544778624613 0.29290974 0.20595926 prediction 0.646108707865553 Functional Loss - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520001 chr15:34520002 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5567 0 0 1 2 1 Ribosome 0.438716749035879 0.438714297380766 0 0 hPsi_site_10984 iPseU_CNN:0;iRNA_PseU:0 10985 chr11 60635066 60635066 1 + A G UCS 60635065 + 60635045 60635085 41 GCTCAGCCACGACCTGGGGTTACCCTGTGGCCCTGCTACTG GCTCAGCCACGACCTGGGGTTGCCCTGTGGCCCTGCTACTG < 41bp 0.892655504206736 0.569605075528132 0.4130665 0.26709715 prediction 0.646100857357209 Functional Loss - ZP1 ENSG00000149506 CDS Human protein_coding chr11:60635065 chr11:60635066 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5568 0 0 0 0 0 exosome 0.43872341104316 0.438683170751405 0 0 hPsi_site_10985 iPseU_CNN:0;iRNA_PseU:0 10986 chrX 151819993 151819993 1 + A G UCEC 151819992 + 151819972 151820012 41 TACTGTGTTGCTTACAGGCTTAACTTCAATGCTCATCCTGA TACTGTGTTGCTTACAGGCTTGACTTCAATGCTCATCCTGA < 41bp 0.823035204866048 0.41562815447928 0.6783998 0.3961988 prediction 0.646070409732096 Functional Loss - GABRQ ENSG00000147402 CDS Human other chrX:151819992 chrX:151819993 synonymous SNV . 0 22 hPsi_associated_SNPs_5569 0 0 1 0 1 chromatin 0.438718636326059 0.438718950092613 0.3567996 0 hPsi_site_10986 iPseU_CNN:0.3567996;iRNA_PseU:0 10987 chr1 117297273 117297273 1 + A G UCEC 117297272 + 117297252 117297292 41 GGTGCAGTCTCCAAAGAGATTACGAATGCCTTGGAAACCTG GGTGCAGTCTCCAAAGAGATTGCGAATGCCTTGGAAACCTG < 41bp 0.823028812570736 0.432158107480701 0.25058007 0.25770992 prediction 0.646057625141472 Functional Loss - CD2 ENSG00000116824 CDS Human protein_coding chr1:117297272 chr1:117297273 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5570 0 0 0 0 1 exosome 0.438906046624962 0.438781013143048 0 0 hPsi_site_10987 iPseU_CNN:0;iRNA_PseU:0 10988 chr16 1877857 1877857 1 + A G OV 1877856 + 1877836 1877876 41 CGATGAGATCGAGGCTGGCATACACGGGCTGGTCAGTATGA CGATGAGATCGAGGCTGGCATGCACGGGCTGGTCAGTATGA < 41bp 0.823019995647738 0.430876258570973 0.33285806 0.18427068 prediction 0.646039991295477 Functional Loss - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877856 chr16:1877857 nonsynonymous SNV 0.789 2 22 hPsi_associated_SNPs_5571 0 0 1 0 1 Ribosome 0.436073518883585 0.438875743602077 0 0 hPsi_site_10988 iPseU_CNN:0;iRNA_PseU:0 10989 chr22 37455405 37455405 1 + T G UCEC 37455404 + 37455384 37455424 41 GCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAG GCAGCGAGGACCAGGCAGAGTGCCTGTGTGTGGTGTCCAAG < 41bp 0.842410583367993 0.519392128691815 0.27474165 0.23055387 prediction 0.646036909352356 Functional Loss - KCTD17 ENSG00000100379 CDS Human protein_coding chr22:37455404 chr22:37455405 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_5572 0 0 0 0 2 Ribosome 0.438718587135469 0.438718546256749 0 0 hPsi_site_10989 iPseU_CNN:0;iRNA_PseU:0 10990 chr4 123814039 123814039 1 + T C LUSC 123814040 - 123814020 123814060 41 GTTTACACAGGACTGTTTTATAAACTCTATCATAAGGAACT GTTTACACAGGACTGTTTTATGAACTCTATCATAAGGAACT < 41bp 0.823013885208603 0.459791859678665 0.30023837 0.2407296 prediction 0.646027770417206 Functional Loss - NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814040 chr4:123814039 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_5573 0 0 0 0 0 Ribosome 0.438721316142354 0.438718585550747 0 0 hPsi_site_10990 iPseU_CNN:0;iRNA_PseU:0 10991 chr16 31497096 31497096 1 + A G UCEC 31497095 + 31497075 31497115 41 GCTGGCTGTTTGCACCCGTGTACCTGACAGCGGGGGTCATC GCTGGCTGTTTGCACCCGTGTGCCTGACAGCGGGGGTCATC < 41bp 0.823004106545726 0.396278808426437 0.63966393 0.20457414 prediction 0.646008213091452 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31497095 chr16:31497096 nonsynonymous SNV 0.098 5 22 hPsi_associated_SNPs_5574 0 0 0 0 1 exosome 0.438743670652714 0.438660348766231 0.27932786 0 hPsi_site_10991 iPseU_CNN:0.27932786;iRNA_PseU:0 10992 chr3 11301136 11301136 1 + A C UCEC 11301135 + 11301115 11301155 41 AGCCCCTCAGGTACCTTAAGTATCGTACCAAGACCCGAGCC AGCCCCTCAGGTACCTTAAGTCTCGTACCAAGACCCGAGCC < 41bp 0.873662649712791 0.550685668906899 0.4320858 0.37817866 prediction 0.645953961611785 Functional Loss - HRH1 ENSG00000196639 CDS Human protein_coding chr3:11301135 chr3:11301136 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5575 0 0 0 0 0 nucleus 0.438718592056305 0.438718592524893 0 0 hPsi_site_10992 iPseU_CNN:0;iRNA_PseU:0 10993 chr11 66392441 66392441 1 + A G STAD 66392440 + 66392420 66392460 41 TTCGTGCAGCTGCTTCTTCCTACAACACCCAGGGAGCAGCT TTCGTGCAGCTGCTTCTTCCTGCAACACCCAGGGAGCAGCT < 41bp 0.82297452897965 0.412669708445876 0.6037313 0.25295117 prediction 0.6459490579593 Functional Loss - RBM14 ENSG00000239306 CDS Human protein_coding chr11:66392440 chr11:66392441 nonsynonymous SNV 0.979 5 22 hPsi_associated_SNPs_5576 0 0 1 0 0 Nucleus 0.438717509350147 0.438717039785643 0.2074626 0 hPsi_site_10993 iPseU_CNN:0.2074626;iRNA_PseU:0 10994 chr9 82340004 82340004 1 + A G LUAD 82340003 + 82339983 82340023 41 ACATCTCCGTGGACGACAAATACATTGTCACTGGCTCTGGG ACATCTCCGTGGACGACAAATGCATTGTCACTGGCTCTGGG < 41bp 0.822971193917634 0.427903604788295 0.57546675 0.3379063 prediction 0.645942387835267 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82340003 chr9:82340004 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_5577 0 0 1 0 1 Endoplasmic reticulum 0.439032342886033 0.438770555380112 0.1509335 0 hPsi_site_10994 iPseU_CNN:0.1509335;iRNA_PseU:0 10995 chr15 89736470 89736470 1 + A G PRAD 89736469 + 89736449 89736489 41 TTATGTTCTTGTTGCAGATTTATGTTCCTCTCATGCTGGTT TTATGTTCTTGTTGCAGATTTGTGTTCCTCTCATGCTGGTT < 41bp 0.822962978651865 0.411761512644838 0.4632612 0.32607895 prediction 0.645925957303729 Functional Loss - ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89736469 chr15:89736470 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5578 0 0 1 0 2 Nucleus 0.438199265483273 0.438373870084018 0 0 hPsi_site_10995 iPseU_CNN:0;iRNA_PseU:0 10996 chr7 105207629 105207629 1 + A G GBM 105207628 + 105207608 105207648 41 TGCACTACTGCTGAAAGATGTACTGCAGTCAGCTTCAGGGC TGCACTACTGCTGAAAGATGTGCTGCAGTCAGCTTCAGGGC < 41bp 0.897519362833413 0.574556485566881 0.5907387 0.3103789 prediction 0.645925754533066 Functional Loss - RINT1 ENSG00000135249 CDS Human protein_coding chr7:105207628 chr7:105207629 synonymous SNV . 0 22 hPsi_associated_SNPs_5579 0 0 1 0 1 Nucleus 0.440974609859237 0.443639495281459 0.1814774 0 hPsi_site_10996 iPseU_CNN:0.1814774;iRNA_PseU:0 10997 chr15 66777396 66777396 1 + A C LIHC 66777395 + 66777375 66777415 41 GAGCATGGGACTGTCTCTGGTAGAGATGGCGGTTGGGAGGT GAGCATGGGACTGTCTCTGGTCGAGATGGCGGTTGGGAGGT < 41bp 0.822952078585289 0.449294094422859 0.26993185 0.17204252 prediction 0.645904157170577 Functional Loss - MAP2K1 ENSG00000169032 CDS Human protein_coding chr15:66777395 chr15:66777396 synonymous SNV . 0 22 hPsi_associated_SNPs_5580 0 0 1 0 1 Ribosome 0.43872403698925 0.438543582891249 0 0 hPsi_site_10997 iPseU_CNN:0;iRNA_PseU:0 10998 chr17 48253226 48253226 1 + A G rs73987439 48253225 + 48253205 48253245 41 TGGGGTGAGAGTGTGTGGAGTAAGGACATTCAGAATAAATA TGGGGTGAGAGTGTGTGGAGTGAGGACATTCAGAATAAATA < 41bp 0.822921519044839 0.482139285359661 0.5260106 0.4047169 prediction 0.645843038089678 Functional Loss - SGCA ENSG00000188662 ncRNA_intronic Human transcribed_unitary_pseudogene chr17:48253225 chr17:48253226 . . 0 22 hPsi_associated_SNPs_5581 1 0 0 0 0 Cytosol 0.438718944288292 0.43871859309137 0.0520212 0 hPsi_site_10998 iPseU_CNN:0.0520212;iRNA_PseU:0 10999 chr19 3110312 3110312 1 + A G COAD 3110311 + 3110291 3110331 41 TGGAGACGCTCAAGATCCTCTACAAGTACGAGCAGAACAAG TGGAGACGCTCAAGATCCTCTGCAAGTACGAGCAGAACAAG < 41bp 0.896655167027409 0.57374022443609 0.72478104 0.33608723 prediction 0.645829885182639 Functional Loss - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3110311 chr19:3110312 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_5582 0 0 0 0 1 Cytosol 0.43712794145419 0.437576472841922 0.44956208 0 hPsi_site_10999 iPseU_CNN:0.44956208;iRNA_PseU:0 11000 chrX 40448309 40448309 1 + A C LUSC 40448308 + 40448288 40448328 41 TTCCGAAATGGAAATTGGCCTATACCAGGAGAGCGGATCCC TTCCGAAATGGAAATTGGCCTCTACCAGGAGAGCGGATCCC < 41bp 0.852186997697673 0.529289712928379 0.62441814 0.50423235 prediction 0.645794569538588 Functional Loss - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40448308 chrX:40448309 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5583 0 0 1 0 2 Ribosome 0.438718597968074 0.438718592992928 0.24037158 0 hPsi_site_11000 iPseU_CNN:0.24037158;iRNA_PseU:0 11001 chr6 27115467 27115467 1 + A G rs17737028 27115466 + 27115446 27115486 41 GCAACTCTTTACAATGTTTCTAAATTAACCCACTGGAAAGC GCAACTCTTTACAATGTTTCTGAATTAACCCACTGGAAAGC < 41bp 0.825064958404426 0.502189657812005 0.3519439 0.32997704 prediction 0.645750601184842 Functional Loss - MIR3143 ENSG00000265565 ncRNA_exonic Human miRNA chr6:27115466 chr6:27115467 . . 0 22 hPsi_associated_SNPs_5584 0 0 1 0 0 unknown 0.438698380892701 0.438644644517938 0 0 hPsi_site_11001 iPseU_CNN:0;iRNA_PseU:0 11002 chr3 186917380 186917380 1 + A G UCEC 186917379 + 186917359 186917399 41 GGCACACCTGGCAGTCGCCCTACGTGGTCATCCTCTTCCAC GGCACACCTGGCAGTCGCCCTGCGTGGTCATCCTCTTCCAC < 41bp 0.899749938974414 0.576884838253196 0.9072563 0.22329164 prediction 0.645730201442435 Functional Loss - RTP1 ENSG00000175077 CDS Human protein_coding chr3:186917379 chr3:186917380 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_5585 0 0 0 0 1 exosome 0.438719005753313 0.438718580599194 0.8145126 0 hPsi_site_11002 iPseU_CNN:0.8145126;iRNA_PseU:0 11003 chr16 3533516 3533516 1 + A G LUSC 3533515 + 3533495 3533535 41 AGCACCACTATCTCCCCTATTACTACTCCATTCGAGGGGTC AGCACCACTATCTCCCCTATTGCTACTCCATTCGAGGGGTC < 41bp 0.897071610267969 0.574234278605902 0.66179585 0.48769847 prediction 0.645674663324133 Functional Loss - NAA60 ENSG00000122390;ENSG00000262621 CDS Human other chr16:3533515 chr16:3533516 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5586 0 0 1 0 0 chromatin 0.438718477418554 0.438718656408812 0.3235917 0 hPsi_site_11003 iPseU_CNN:0.3235917;iRNA_PseU:0 11004 chr2 220111586 220111586 1 + A G COAD 220111585 + 220111565 220111605 41 GCATGAGGCCTGGCTGCTGCTACCATTCTTCAAGGTCAGAA GCATGAGGCCTGGCTGCTGCTGCCATTCTTCAAGGTCAGAA < 41bp 0.822836658631362 0.407514648234658 0.67448896 0.23372883 prediction 0.645673317262724 Functional Loss - STK16 ENSG00000115661 CDS Human protein_coding chr2:220111585 chr2:220111586 synonymous SNV . 0 22 hPsi_associated_SNPs_5587 0 0 1 0 1 Ribosome 0.438718580807594 0.438718675796081 0.34897792 0 hPsi_site_11004 iPseU_CNN:0.34897792;iRNA_PseU:0 11005 chr12 56227618 56227618 1 + A G rs372235974 56227617 + 56227597 56227637 41 TGGGCACGGTGGCTCACGCCTATAATCCCAGCACTTTGGGA TGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGA < 41bp 0.822834416781957 0.473920565033144 0.42686278 0.3231463 prediction 0.645668833563914 Functional Loss - TMEM198B ENSG00000182796 ncRNA_intronic Human transcribed_unitary_pseudogene chr12:56227617 chr12:56227618 . . 0 22 hPsi_associated_SNPs_5588 0 0 0 0 0 unknown 0.436585093300438 0.437128112207685 0 0 hPsi_site_11005 iPseU_CNN:0;iRNA_PseU:0 11006 chr22 39421622 39421622 1 + A C rs201456810 39421621 + 39421601 39421641 41 GTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTAT GTCAGCCATTCATGCCTTGGTCCAAATTCGATGACAATTAT < 41bp 0.86466502190049 0.541846238056576 0.39115322 0.27182436 prediction 0.645637567687828 Functional Loss - APOBEC3D ENSG00000243811 CDS Human protein_coding chr22:39421621 chr22:39421622 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5589 0 0 0 0 1 Nucleus 0.438721672695617 0.438718598394085 0 0 hPsi_site_11006 iPseU_CNN:0;iRNA_PseU:0 11007 chr8 99961318 99961318 1 + A G UCEC 99961317 + 99961297 99961337 41 CCTGTACGGTCTCAGCGCGGTACAGACCATGCACATGAACC CCTGTACGGTCTCAGCGCGGTGCAGACCATGCACATGAACC < 41bp 0.907597394239669 0.584787374729879 0.97595215 0.70434934 prediction 0.645620039019579 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961317 chr8:99961318 synonymous SNV . 0 22 hPsi_associated_SNPs_5590 0 0 1 0 0 exosome 0.438778372702918 0.438730417874575 0.54320562 0 hPsi_site_11007 iPseU_CNN:0.54320562;iRNA_PseU:0 11008 chr3 136646930 136646930 1 + A G COAD 136646929 + 136646909 136646949 41 CATCAAGAAGAATGAGAGATTATGGCTTCTGGATGATTCTA CATCAAGAAGAATGAGAGATTGTGGCTTCTGGATGATTCTA < 41bp 0.822781219221988 0.423934197941973 0.26978663 0.24567384 prediction 0.645562438443976 Functional Loss - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136646929 chr3:136646930 synonymous SNV . 0 22 hPsi_associated_SNPs_5591 0 0 1 0 0 Ribosome 0.438743243690004 0.438723669937387 0 0 hPsi_site_11008 iPseU_CNN:0;iRNA_PseU:0 11009 chr7 150164369 150164369 1 + A G STAD 150164368 + 150164348 150164388 41 AAGGTTGAGTCTTTGGTGAATACGAACGGAGGACCCTATCA AAGGTTGAGTCTTTGGTGAATGCGAACGGAGGACCCTATCA < 41bp 0.822763586275451 0.419026078442325 0.4568188 0.3106286 prediction 0.645527172550902 Functional Loss - GIMAP8 ENSG00000171115 CDS Human protein_coding chr7:150164368 chr7:150164369 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5592 0 0 0 0 1 cytosol 0.438718588624032 0.438718572640602 0 0 hPsi_site_11009 iPseU_CNN:0;iRNA_PseU:0 11010 chr20 39729962 39729962 1 + A G UCEC 39729961 + 39729941 39729981 41 ACATCCAAGGTTCCATTAAATACATCATGCTTAACCCTAGT ACATCCAAGGTTCCATTAAATGCATCATGCTTAACCCTAGT < 41bp 0.822749167638902 0.413673449562857 0.6920755 0.38031408 prediction 0.645498335277805 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39729961 chr20:39729962 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5593 0 0 1 0 1 Nucleus 0.438718593273144 0.4387185929962 0.384151 0 hPsi_site_11010 iPseU_CNN:0.384151;iRNA_PseU:0 11011 chr10 75530113 75530113 1 + A G UCEC 75530112 + 75530092 75530132 41 GAGCGTCTAAGCAATGGGGATATATATTTACTGGAGAATGG GAGCGTCTAAGCAATGGGGATGTATATTTACTGGAGAATGG < 41bp 0.903963633210172 0.581224561601718 0.24239412 0.24665475 prediction 0.645478143216908 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75530112 chr10:75530113 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_5594 0 0 1 0 1 Nucleus 0.438748141045834 0.438758929195398 0 0 hPsi_site_11011 iPseU_CNN:0;iRNA_PseU:0 11012 chr19 58005000 58005000 1 + A G SARC 58004999 + 58004979 58005019 41 TATAGCCACAAGTCCAACCTTATCAAACATTGGCGTGTTCA TATAGCCACAAGTCCAACCTTGTCAAACATTGGCGTGTTCA < 41bp 0.82271777555217 0.417481687777715 0.529254 0.30644387 prediction 0.645435551104339 Functional Loss - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58004999 chr19:58005000 nonsynonymous SNV 0.405 0 22 hPsi_associated_SNPs_5595 0 0 0 0 0 exosome 0.438788361465894 0.439408341066604 0.058508 0 hPsi_site_11012 iPseU_CNN:0.058508;iRNA_PseU:0 11013 chr7 92027579 92027579 1 + A G LUSC 92027578 + 92027558 92027598 41 TATACTTCTTGCAATACAGTTATCACTGCAAGAGTCTGGGC TATACTTCTTGCAATACAGTTGTCACTGCAAGAGTCTGGGC < 41bp 0.891864738551941 0.569162582639555 0.56073356 0.3455179 prediction 0.645404311824773 Functional Loss - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92027578 chr7:92027579 synonymous SNV . 0 22 hPsi_associated_SNPs_5596 0 0 1 0 1 Cytosol 0.438317675746021 0.438326929336224 0.12146712 0 hPsi_site_11013 iPseU_CNN:0.12146712;iRNA_PseU:0 11014 chr5 112227799 112227799 1 + A G rs712665 112227798 + 112227778 112227818 41 GCTGAAAATGATTTAGAAAATAGTACCACATGGCAAAACCC GCTGAAAATGATTTAGAAAATGGTACCACATGGCAAAACCC < 41bp 0.822701923063024 0.438496292275242 0.24802834 0.19047746 prediction 0.645403846126049 Functional Loss - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112227798 chr5:112227799 nonsynonymous SNV 0.539 0 22 hPsi_associated_SNPs_5597 0 0 0 0 0 Ribosome 0.438718589392822 0.438718038087967 0 0 hPsi_site_11014 iPseU_CNN:0;iRNA_PseU:0 11015 chr2 99162480 99162480 1 + T G UCEC 99162479 + 99162459 99162499 41 AAGCAGATAAAAAGTTAGAATTTGTTCCCACAAACTTGCAC AAGCAGATAAAAAGTTAGAATGTGTTCCCACAAACTTGCAC < 41bp 0.822660217168664 0.494838642940356 0.5366863 0.34554952 prediction 0.645320434337327 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99162479 chr2:99162480 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5598 0 0 0 0 2 Ribosome 0.438713792519753 0.438780485930076 0.0733725999999999 0 hPsi_site_11015 iPseU_CNN:0.0733725999999999;iRNA_PseU:0 11016 chr7 26248077 26248077 1 + A G LIHC 26248076 + 26248056 26248096 41 GAATTGATTGAAGCGTTTCTTAACTCTCAGAAAGCTGGCAA GAATTGATTGAAGCGTTTCTTGACTCTCAGAAAGCTGGCAA < 41bp 0.822652966031534 0.426970806741656 0.3200611 0.14292118 prediction 0.645305932063068 Functional Loss - CBX3 ENSG00000122565 CDS Human protein_coding chr7:26248076 chr7:26248077 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5599 0 0 1 0 2 Ribosome 0.432118827635104 0.438779257069641 0 0 hPsi_site_11016 iPseU_CNN:0;iRNA_PseU:0 11017 chr5 14694371 14694371 1 + A G rs185900833 14694370 + 14694350 14694390 41 AGGGAGGCAGCCTTCCTGGCTATGAGCCATCGCCTGCCCAA AGGGAGGCAGCCTTCCTGGCTGTGAGCCATCGCCTGCCCAA < 41bp 0.867518937782828 0.544869723037189 0.4265879 0.21907043 prediction 0.645298429491277 Functional Loss - OTULIN ENSG00000154124 UTR3 Human protein_coding chr5:14694370 chr5:14694371 . . 0 22 hPsi_associated_SNPs_5600 0 0 1 0 0 Ribosome 0.43871860051233 0.438718595871321 0 0 hPsi_site_11017 iPseU_CNN:0;iRNA_PseU:0 11018 chr1 3648065 3648065 1 + A G PRAD 3648064 + 3648044 3648084 41 GGTGTCCAAACTGCATCGAGTATTTCACCTCCCAAGGGTTA GGTGTCCAAACTGCATCGAGTGTTTCACCTCCCAAGGGTTA < 41bp 0.879151628377321 0.556509657702018 0.6130586 0.40588897 prediction 0.645283941350606 Functional Loss - TP73 ENSG00000078900 CDS Human protein_coding chr1:3648064 chr1:3648065 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_5601 0 0 0 0 2 chromatin 0.438718587427971 0.43871858819154 0.2261172 0 hPsi_site_11018 iPseU_CNN:0.2261172;iRNA_PseU:0 11019 chr2 238976761 238976761 1 + A C rs76625747 238976760 + 238976740 238976780 41 GGAAAGCCTCGCGAAGATGATAGGGGGGAAACCTCAAGATA GGAAAGCCTCGCGAAGATGATCGGGGGGAAACCTCAAGATA < 41bp 0.873584219111803 0.550954400576168 0.73727155 0.35645378 prediction 0.645259637071271 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238976760 chr2:238976761 synonymous SNV . 0 22 hPsi_associated_SNPs_5602 0 0 1 0 2 Ribosome 0.438718593003057 0.438718002091131 0.4745431 0 hPsi_site_11019 iPseU_CNN:0.4745431;iRNA_PseU:0 11020 chr2 69046331 69046331 1 + A G UCEC 69046330 + 69046310 69046350 41 CTTCCCCAAGTCCAAGGATATACCCCTGTCACCCCCTGCCC CTTCCCCAAGTCCAAGGATATGCCCCTGTCACCCCCTGCCC < 41bp 0.822618986137416 0.39514275258695 0.86762846 0.6626395 prediction 0.645237972274831 Functional Loss - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69046330 chr2:69046331 nonsynonymous SNV 0.789 0 22 hPsi_associated_SNPs_5603 0 0 0 0 1 chromatin 0.438718594800106 0.438720242863066 0.40997792 0 hPsi_site_11020 iPseU_CNN:0.40997792;iRNA_PseU:0 11021 chr5 140626152 140626152 1 + A G STAD 140626151 + 140626131 140626171 41 GGAAAATGCTCTGTCTCTGTTAAGGTGCTGGATGTTAACGA GGAAAATGCTCTGTCTCTGTTGAGGTGCTGGATGTTAACGA < 41bp 0.889209936873086 0.566605073059503 0.3205328 0.20863196 prediction 0.645209727627167 Functional Loss - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140626151 chr5:140626152 nonsynonymous SNV 0.692 0 22 hPsi_associated_SNPs_5604 0 0 0 0 0 exosome 0.438582996564981 0.438717742701691 0 0 hPsi_site_11021 iPseU_CNN:0;iRNA_PseU:0 11022 chr17 33966737 33966737 1 + A C KIRP 33966736 + 33966716 33966756 41 AATTGACAATGCAGATGAGTTACTAGAAAGCTTCCTGGAGG AATTGACAATGCAGATGAGTTCCTAGAAAGCTTCCTGGAGG < 41bp 0.822596324314702 0.457495193615712 0.56476027 0.2108042 prediction 0.645192648629403 Functional Loss - AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33966736 chr17:33966737 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5605 0 0 1 0 1 Cytosol 0.440343275248049 0.438718775945255 0.12952054 0 hPsi_site_11022 iPseU_CNN:0.12952054;iRNA_PseU:0 11023 chr5 177550908 177550908 1 + A G rs7735932 177550907 + 177550887 177550927 41 CTAGGCCTATCTGAGACCCATACAGGCCCACACCTGAGCTC CTAGGCCTATCTGAGACCCATGCAGGCCCACACCTGAGCTC < 41bp 0.858613046013823 0.536051335546805 0.28385013 0.25048584 prediction 0.645123420934036 Functional Loss - N4BP3 ENSG00000145911 UTR3 Human protein_coding chr5:177550907 chr5:177550908 . . 0 22 hPsi_associated_SNPs_5606 0 0 0 0 0 chromatin 0.438724219550336 0.43871999502574 0 0 hPsi_site_11023 iPseU_CNN:0;iRNA_PseU:0 11024 chr11 77774950 77774950 1 + A G UCEC 77774949 + 77774929 77774969 41 TGCAGGTGCTAACCAAGCGTTACCCCAAGAACTGCCTGCTG TGCAGGTGCTAACCAAGCGTTGCCCCAAGAACTGCCTGCTG < 41bp 0.897641051525961 0.575082804330506 0.8072475 0.19812107 prediction 0.645116494390909 Functional Loss - THRSP ENSG00000151365 CDS Human protein_coding chr11:77774949 chr11:77774950 nonsynonymous SNV 0.927 0 22 hPsi_associated_SNPs_5607 0 0 0 0 0 nucleolus 0.438668885592906 0.438718849450017 0.614495 0 hPsi_site_11024 iPseU_CNN:0.614495;iRNA_PseU:0 11025 chr3 5229591 5229591 1 + A C SKCM 5229590 + 5229570 5229610 41 TGGGGCCCAGCATGGGCTTCTACCAGCGCTTTCCGCTCAGC TGGGGCCCAGCATGGGCTTCTCCCAGCGCTTTCCGCTCAGC < 41bp 0.85573223128059 0.533174554476218 0.411499 0.27159402 prediction 0.645115353608744 Functional Loss - EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229590 chr3:5229591 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_5608 0 0 1 0 0 Ribosome 0.438718152818136 0.438716590961198 0 0 hPsi_site_11025 iPseU_CNN:0;iRNA_PseU:0 11026 chr20 32371641 32371641 1 + A G OV 32371640 + 32371620 32371660 41 AGTTCTTCCGGCGGGAGCATTATCTCAAACTGCATGCTCAC AGTTCTTCCGGCGGGAGCATTGTCTCAAACTGCATGCTCAC < 41bp 0.906203370666282 0.583655970423859 0.83164316 0.7735065 prediction 0.645094800484847 Functional Loss - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32371640 chr20:32371641 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_5609 0 0 1 0 1 chromatin 0.438737600087308 0.438719515495774 0.11627332 0 hPsi_site_11026 iPseU_CNN:0.11627332;iRNA_PseU:0 11027 chr11 68456349 68456349 1 + A G UCEC 68456348 + 68456328 68456368 41 AGGTCCATACCTGAAAACAATATCATGCGCACAATCATTGA AGGTCCATACCTGAAAACAATGTCATGCGCACAATCATTGA < 41bp 0.822484999971024 0.414064438691138 0.2854693 0.20561871 prediction 0.644969999942049 Functional Loss - GAL ENSG00000069482 CDS Human protein_coding chr11:68456348 chr11:68456349 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5610 0 0 1 0 2 Ribosome 0.431148101298702 0.415429478066288 0 0 hPsi_site_11027 iPseU_CNN:0;iRNA_PseU:0 11028 chr3 28454762 28454762 1 + A G LUAD 28454761 + 28454741 28454781 41 TCATGAACACTGATTCAAGATATAATAACTGCTCAATTTCT TCATGAACACTGATTCAAGATGTAATAACTGCTCAATTTCT < 41bp 0.822482945970357 0.428898741725299 0.34822893 0.3081324 prediction 0.644965891940713 Functional Loss - ZCWPW2 ENSG00000206559 CDS Human protein_coding chr3:28454761 chr3:28454762 nonsynonymous SNV 0.930 3 22 hPsi_associated_SNPs_5611 0 0 0 0 0 nucleus 0.438660744484216 0.438784299584217 0 0 hPsi_site_11028 iPseU_CNN:0;iRNA_PseU:0 11029 chr7 75615481 75615481 1 + A G KIRP 75615480 + 75615460 75615500 41 ACCACCCTTGGCCCCAGGTCTACGTCCAGCACCTGCTAAAG ACCACCCTTGGCCCCAGGTCTGCGTCCAGCACCTGCTAAAG < 41bp 0.822449390894089 0.408958157579007 0.6207838 0.33501023 prediction 0.644898781788178 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75615480 chr7:75615481 nonsynonymous SNV 0.858 5 22 hPsi_associated_SNPs_5612 0 0 1 0 2 Nucleus 0.438718589465839 0.438718593658681 0.2415676 0 hPsi_site_11029 iPseU_CNN:0.2415676;iRNA_PseU:0 11030 chr4 115597237 115597237 1 + T G LUSC 115597236 + 115597216 115597256 41 GATCTCCTTTTGTCAGTATTTTTTACTGGATATTGCCTTTG GATCTCCTTTTGTCAGTATTTGTTACTGGATATTGCCTTTG < 41bp 0.822444126632623 0.497657812383212 0.21510643 0.13278729 prediction 0.644888253265246 Functional Loss - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115597236 chr4:115597237 nonsynonymous SNV 0.972 2 22 hPsi_associated_SNPs_5613 0 0 0 0 0 Ribosome 0.438718615183924 0.438718569015633 0 0 hPsi_site_11030 iPseU_CNN:0;iRNA_PseU:0 11031 chr15 59752274 59752274 1 + A G SKCM 59752273 + 59752253 59752293 41 GTAGAGCACGCCTTTCGGATTAAAGATGACATTGTCAACAG GTAGAGCACGCCTTTCGGATTGAAGATGACATTGTCAACAG < 41bp 0.897850512888859 0.575414318272203 0.5528944 0.33980557 prediction 0.64487238923331 Functional Loss - FAM81A ENSG00000157470 CDS Human protein_coding chr15:59752273 chr15:59752274 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_5614 0 0 0 0 0 Cytosol 0.438849696292395 0.438678458559158 0.1057888 0 hPsi_site_11031 iPseU_CNN:0.1057888;iRNA_PseU:0 11032 chr7 95665036 95665036 1 + A G LGG 95665035 + 95665015 95665055 41 GTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCG GTGGTTGGCAGTGAGGAAGGTGCAGTCTACACGGCTTGTCG < 41bp 0.822427069451021 0.412351007087786 0.9002889 0.68998206 prediction 0.644854138902041 Functional Loss - DYNC1I1 ENSG00000158560 CDS Human protein_coding chr7:95665035 chr7:95665036 nonsynonymous SNV 0.925 1 22 hPsi_associated_SNPs_5615 0 0 0 0 1 Cytosol 0.438718592995094 0.438718592995101 0.42061368 0 hPsi_site_11032 iPseU_CNN:0.42061368;iRNA_PseU:0 11033 chr9 134073721 134073721 1 + A G rs139273355 134073720 + 134073700 134073740 41 GTGGCCGTCGAAACATCAAGTACCCCCATAGCCTCCAGCAC GTGGCCGTCGAAACATCAAGTGCCCCCATAGCCTCCAGCAC < 41bp 0.822409053171252 0.412049117290009 0.48555338 0.31025654 prediction 0.644818106342505 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134073720 chr9:134073721 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5616 0 0 1 0 0 Cytosol 0.438718590028042 0.43871858265125 0 0 hPsi_site_11033 iPseU_CNN:0;iRNA_PseU:0 11034 chr17 6943240 6943240 1 + A G UCEC 6943239 + 6943219 6943259 41 CTTGTAACAGAAGCACTAGATACTAAAGTTCCCCTACCCAA CTTGTAACAGAAGCACTAGATGCTAAAGTTCCCCTACCCAA < 41bp 0.822403163339521 0.423275010388075 0.46853667 0.22780713 prediction 0.644806326679042 Functional Loss - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6943239 chr17:6943240 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_5617 0 0 0 0 0 chromatin 0.438754068729506 0.43871284244998 0 0 hPsi_site_11034 iPseU_CNN:0;iRNA_PseU:0 11035 chr12 112150353 112150353 1 + A G CESC 112150352 + 112150332 112150372 41 TTAGAAGCTCTCTTGGGTTTTACATTGAGAGTAGGTGTTCC TTAGAAGCTCTCTTGGGTTTTGCATTGAGAGTAGGTGTTCC < 41bp 0.822376693932753 0.398312691766109 0.3232767 0.22493553 prediction 0.644753387865505 Functional Loss - ACAD10 ENSG00000111271 CDS Human protein_coding chr12:112150352 chr12:112150353 nonsynonymous SNV 0.063 0 22 hPsi_associated_SNPs_5618 0 0 0 0 0 Endoplasmic reticulum 0.438718592995099 0.43871859298641 0 0 hPsi_site_11035 iPseU_CNN:0;iRNA_PseU:0 11036 chr12 6952982 6952982 1 + T G UCEC 6952981 + 6952961 6953001 41 CTGGGCAGCAGAAGACTGTATTTGTGGGACACACGGGTGAC CTGGGCAGCAGAAGACTGTATGTGTGGGACACACGGGTGAC < 41bp 0.843954921615307 0.521601152231707 0.6861546 0.3977779 prediction 0.644707538767201 Functional Loss - GNB3 ENSG00000111664 CDS Human protein_coding chr12:6952981 chr12:6952982 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5619 0 0 1 0 1 nucleolus 0.438691164062913 0.437977286592765 0.3723092 0 hPsi_site_11036 iPseU_CNN:0.3723092;iRNA_PseU:0 11037 chr14 69703158 69703158 1 + A G rs3211166 69703157 + 69703137 69703177 41 AGAGCCCTTTGTGGTGAAGCTACGGTTTGAACCTGCAGGAA AGAGCCCTTTGTGGTGAAGCTGCGGTTTGAACCTGCAGGAA < 41bp 0.907786992692273 0.585436030091871 0.8256216 0.3940857 prediction 0.644701925200804 Functional Loss - EXD2 ENSG00000081177 CDS Human protein_coding chr14:69703157 chr14:69703158 synonymous SNV . 0 22 hPsi_associated_SNPs_5620 0 0 1 0 1 Ribosome 0.438718593011779 0.438718592995102 0.6512432 0 hPsi_site_11037 iPseU_CNN:0.6512432;iRNA_PseU:0 Dilated Cardiomyopathy, Dominant Dilated Cardiomyopathy, Dominant 11038 chr12 53421886 53421886 1 + A G STAD 53421885 + 53421865 53421905 41 ACAGAGGAGGCGGGGACCGCTATGAAGACCGATATGACAGA ACAGAGGAGGCGGGGACCGCTGTGAAGACCGATATGACAGA < 41bp 0.908856239495203 0.586551490598598 0.54573524 0.47722214 prediction 0.644609497793209 Functional Loss - EIF4B ENSG00000063046 CDS Human protein_coding chr12:53421885 chr12:53421886 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_5621 0 0 1 0 2 Cytosol 0.443185793374129 0.439819561547475 0.0914704799999999 0 hPsi_site_11038 iPseU_CNN:0.0914704799999999;iRNA_PseU:0 11039 chr15 22935909 22935909 1 + A G LUAD 22935908 + 22935888 22935928 41 ATGGGAGTGTCAGTAACATCTATAAGTTGGATGCCAAGAAA ATGGGAGTGTCAGTAACATCTGTAAGTTGGATGCCAAGAAA < 41bp 0.822266665541596 0.416982838430416 0.4344255 0.34708518 prediction 0.644533331083192 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22935908 chr15:22935909 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_5622 0 0 1 0 2 Cytosol 0.438666244229886 0.438232729376249 0 0 hPsi_site_11039 iPseU_CNN:0;iRNA_PseU:0 11040 chr5 120021930 120021930 1 + A C UCEC 120021929 + 120021909 120021949 41 GGTTCCAACTGCCAATCCTGTAAAAACCAATGGCACCCTTC GGTTCCAACTGCCAATCCTGTCAAAACCAATGGCACCCTTC < 41bp 0.865558198255186 0.543292777815447 0.6642653 0.45295802 prediction 0.644530840879478 Functional Loss - PRR16 ENSG00000184838 CDS Human protein_coding chr5:120021929 chr5:120021930 synonymous SNV . 0 22 hPsi_associated_SNPs_5623 0 0 0 0 0 Cytosol 0.438718567049008 0.438718592526683 0.3285306 0 hPsi_site_11040 iPseU_CNN:0.3285306;iRNA_PseU:0 11041 chr4 37841802 37841802 1 + A G BLCA 37841801 + 37841781 37841821 41 TGGGACGATTCTTTAATTGATAGCAGTCCACTTCTCCACAA TGGGACGATTCTTTAATTGATGGCAGTCCACTTCTCCACAA < 41bp 0.896903709684805 0.574648149715089 0.29373705 0.23929134 prediction 0.644511119939432 Functional Loss - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37841801 chr4:37841802 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_5624 0 0 0 0 1 Nucleus 0.438718592921508 0.438718593017442 0 0 hPsi_site_11041 iPseU_CNN:0;iRNA_PseU:0 11042 chr16 19543830 19543830 1 + A G UCEC 19543829 + 19543809 19543849 41 GGTTAACAGGAAGAAAGCTTTACTGACTCGTGTCCAGGAGA GGTTAACAGGAAGAAAGCTTTGCTGACTCGTGTCCAGGAGA < 41bp 0.822237889712641 0.421955791867013 0.6993401 0.33366126 prediction 0.644475779425282 Functional Loss - CCP110 ENSG00000103540 CDS Human protein_coding chr16:19543829 chr16:19543830 synonymous SNV . 0 22 hPsi_associated_SNPs_5625 0 0 1 0 2 Cytosol 0.438727119407983 0.438363340130339 0.3986802 0 hPsi_site_11042 iPseU_CNN:0.3986802;iRNA_PseU:0 11043 chr19 36168894 36168894 1 + A G rs139622862 36168893 + 36168873 36168913 41 CCAGCTCCCGGTCATGCTGATAGCCATGTATTTCTACACCA CCAGCTCCCGGTCATGCTGATGGCCATGTATTTCTACACCA < 41bp 0.896887341074458 0.57466241721773 0.2603673 0.20549497 prediction 0.644449847713455 Functional Loss - UPK1A ENSG00000105668 CDS Human protein_coding chr19:36168893 chr19:36168894 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_5626 0 0 0 4 1 exosome 0.433958307512869 0.438173091870863 0 0 hPsi_site_11043 iPseU_CNN:0;iRNA_PseU:0 11044 chr12 67696338 67696338 1 + A C rs147083401 67696337 + 67696317 67696357 41 TCGTCCTGTACAAAGTTGGCTATGTGACCCTGATGCAATGG TCGTCCTGTACAAAGTTGGCTCTGTGACCCTGATGCAATGG < 41bp 0.869618446607333 0.547394160947162 0.3239475 0.23241386 prediction 0.644448571320342 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67696337 chr12:67696338 synonymous SNV . 0 22 hPsi_associated_SNPs_5627 0 0 1 0 1 Nucleus 0.438519295856887 0.438719016830527 0 0 hPsi_site_11044 iPseU_CNN:0;iRNA_PseU:0 11045 chr6 158014129 158014129 1 + T G UCEC 158014128 + 158014108 158014148 41 ATACTGTTTCACCTGCAAGATTTTCCGGCCCCCTCGCGCCT ATACTGTTTCACCTGCAAGATGTTCCGGCCCCCTCGCGCCT < 41bp 0.822221068862141 0.488292515752854 0.6354242 0.5335502 prediction 0.644442137724282 Functional Loss - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:158014128 chr6:158014129 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5628 0 0 0 0 1 chromatin 0.441344291503561 0.438628915545866 0.203748 0 hPsi_site_11045 iPseU_CNN:0.203748;iRNA_PseU:0 11046 chr22 38274119 38274119 1 + A G LUAD 38274118 + 38274098 38274138 41 AACCTCGTGTGGACCAGCGGTATCTCAGCCCTGGATGGTGA AACCTCGTGTGGACCAGCGGTGTCTCAGCCCTGGATGGTGA < 41bp 0.904852348640631 0.582637507962527 0.6617507 0.25752676 prediction 0.644429681356208 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38274118 chr22:38274119 nonsynonymous SNV 0.780 0 22 hPsi_associated_SNPs_5629 0 0 1 0 1 Cytosol 0.437829156234364 0.435666629938874 0.3235014 0 hPsi_site_11046 iPseU_CNN:0.3235014;iRNA_PseU:0 11047 chr9 2650419 2650419 1 + A G STAD 2650418 + 2650398 2650438 41 GAATGGAGGATGTGAATACCTATGCCTGCCAGCACCACAGA GAATGGAGGATGTGAATACCTGTGCCTGCCAGCACCACAGA < 41bp 0.903536945845522 0.581389085789027 0.2898715 0.22303766 prediction 0.644295720112989 Functional Loss - VLDLR ENSG00000147852 CDS Human protein_coding chr9:2650418 chr9:2650419 synonymous SNV . 0 22 hPsi_associated_SNPs_5630 0 0 1 0 2 Endoplasmic reticulum 0.436959333694203 0.43576835499221 0 0 hPsi_site_11047 iPseU_CNN:0;iRNA_PseU:0 11048 chr10 105128037 105128037 1 + A G BLCA 105128036 + 105128016 105128056 41 TCCGCATGACCGACAGACTCTACTGGCCGTGCTGCAGTTCC TCCGCATGACCGACAGACTCTGCTGGCCGTGCTGCAGTTCC < 41bp 0.822130634228654 0.41169117585981 0.7205154 0.34114856 prediction 0.644261268457307 Functional Loss - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128036 chr10:105128037 synonymous SNV . 0 22 hPsi_associated_SNPs_5631 0 0 1 0 0 cytosol 0.433769735097741 0.43647124230754 0.4410308 0 hPsi_site_11048 iPseU_CNN:0.4410308;iRNA_PseU:0 11049 chr3 128984416 128984416 1 + A G ESCA 128984415 + 128984395 128984435 41 GGCTTTGAGTATAAGCGCGCTATCGTGGACTGCATCATCAG GGCTTTGAGTATAAGCGCGCTGTCGTGGACTGCATCATCAG < 41bp 0.908195412950142 0.586105759766571 0.68535733 0.2782713 prediction 0.644179306367143 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128984415 chr3:128984416 nonsynonymous SNV 0.906 1 22 hPsi_associated_SNPs_5632 0 0 1 0 0 Nucleus 0.43814921290584 0.436929029380293 0.37071466 0 hPsi_site_11049 iPseU_CNN:0.37071466;iRNA_PseU:0 11050 chr14 50246976 50246976 1 + A G STAD 50246975 + 50246955 50246995 41 TGGTCGATCTTGGCACTCACTAACACCAGTTTCTTCAGATC TGGTCGATCTTGGCACTCACTGACACCAGTTTCTTCAGATC < 41bp 0.822088740476043 0.407296906485651 0.18865839 0.09039906 prediction 0.644177480952087 Functional Loss - KLHDC2 ENSG00000165516 CDS Human protein_coding chr14:50246975 chr14:50246976 synonymous SNV . 0 22 hPsi_associated_SNPs_5633 0 0 1 0 2 Cytosol 0.438698878539648 0.434521922772502 0 0 hPsi_site_11050 iPseU_CNN:0;iRNA_PseU:0 11051 chr19 51321813 51321813 1 + A G rs2411334 51321812 + 51321792 51321832 41 TGCCCACTGGGTCCTCACAGTACCTCCACCCCAGAGGCCCA TGCCCACTGGGTCCTCACAGTGCCTCCACCCCAGAGGCCCA < 41bp 0.877702113268686 0.555615209973578 0.8891505 0.26915917 prediction 0.644173806590215 Functional Loss - LINC01869 ENSG00000180279 ncRNA_exonic Human lincRNA chr19:51321812 chr19:51321813 . . 0 22 hPsi_associated_SNPs_5634 0 0 0 0 0 unknown 0.438731992263905 0.438733336916946 0.778301 0 hPsi_site_11051 iPseU_CNN:0.778301;iRNA_PseU:0 11052 chr20 55982697 55982697 1 + A G STAD 55982696 + 55982676 55982716 41 TGTCCTCGCCCTACATTGAGTACACGCCGGCCAGCCCGGCC TGTCCTCGCCCTACATTGAGTGCACGCCGGCCAGCCCGGCC < 41bp 0.895509763478967 0.573429152339763 0.794941 0.2911651 prediction 0.644161222278408 Functional Loss - RBM38 ENSG00000132819 CDS Human protein_coding chr20:55982696 chr20:55982697 nonsynonymous SNV 0.729 4 22 hPsi_associated_SNPs_5635 0 0 1 0 1 Ribosome 0.436565907864484 0.439657856355219 0.589882 0 hPsi_site_11052 iPseU_CNN:0.589882;iRNA_PseU:0 11053 chr4 15720613 15720613 1 + A G UCEC 15720612 + 15720592 15720632 41 AGTACAGCTGTATTAATGATTACCGGTAGGTGGCCTATATA AGTACAGCTGTATTAATGATTGCCGGTAGGTGGCCTATATA < 41bp 0.822063537144085 0.429661839458333 0.31110597 0.17417625 prediction 0.64412707428817 Functional Loss - BST1 ENSG00000109743 CDS Human protein_coding chr4:15720612 chr4:15720613 nonsynonymous SNV 0.032 3 22 hPsi_associated_SNPs_5636 0 0 0 0 2 Nucleus 0.438718592995016 0.438718592184323 0 0 hPsi_site_11053 iPseU_CNN:0;iRNA_PseU:0 11054 chr17 39975544 39975544 1 + A G LIHC 39975543 + 39975523 39975563 41 CCCGAAGGACGCTGTCCAGCTAGAGACGCTGGAGCTCCCCC CCCGAAGGACGCTGTCCAGCTGGAGACGCTGGAGCTCCCCC < 41bp 0.90876273358908 0.586700794961665 0.656083 0.40320483 prediction 0.644123877254831 Functional Loss - FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39975543 chr17:39975544 synonymous SNV . 0 22 hPsi_associated_SNPs_5637 0 0 1 0 0 Nucleus 0.438705647944815 0.438703720700994 0.312166 0 hPsi_site_11054 iPseU_CNN:0.312166;iRNA_PseU:0 11055 chrX 46940635 46940635 1 + T G UCEC 46940634 + 46940614 46940654 41 AAGTGTCCAACTCTCTGCTCTTTGTAGACATTCCTGCAAAA AAGTGTCCAACTCTCTGCTCTGTGTAGACATTCCTGCAAAA < 41bp 0.829672594335598 0.5076154115078 0.5144559 0.47133675 prediction 0.644114365655596 Functional Loss - RGN ENSG00000130988 CDS Human protein_coding chrX:46940634 chrX:46940635 nonsynonymous SNV 0.502 2 22 hPsi_associated_SNPs_5638 0 0 0 0 2 Cytosol 0.438720959909585 0.438713204331954 0.0289117999999999 0 hPsi_site_11055 iPseU_CNN:0.0289117999999999;iRNA_PseU:0 11056 chr7 141423039 141423039 1 + A G UCEC 141423038 + 141423018 141423058 41 AGATTTCCCTTGGCCTTAATTACATCCACAACTCTAGCATG AGATTTCCCTTGGCCTTAATTGCATCCACAACTCTAGCATG < 41bp 0.822034246133888 0.411364669471544 0.4368871 0.27370477 prediction 0.644068492267777 Functional Loss - WEE2 ENSG00000214102 CDS Human protein_coding chr7:141423038 chr7:141423039 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5639 0 0 0 0 1 exosome 0.438720753943577 0.438626460661328 0 0 hPsi_site_11056 iPseU_CNN:0;iRNA_PseU:0 11057 chrX 152772366 152772366 1 + A G UCEC 152772365 + 152772345 152772385 41 AACTGGAGGACCTGCTTCGCTACTCCAAGCTGTACAGGTGA AACTGGAGGACCTGCTTCGCTGCTCCAAGCTGTACAGGTGA < 41bp 0.822020307327589 0.408322371968364 0.79978883 0.29826573 prediction 0.644040614655179 Functional Loss - BGN ENSG00000182492 CDS Human protein_coding chrX:152772365 chrX:152772366 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5640 0 0 0 1 2 Cytosol 0.439236324082349 0.438719274558083 0.59957766 0 hPsi_site_11057 iPseU_CNN:0.59957766;iRNA_PseU:0 11058 chr20 10025086 10025086 1 + A G GBM 10025085 + 10025065 10025105 41 GGAAGCGTCAAGAGAAGGGGTAGTGGAAATAGTTCGAGGCA GGAAGCGTCAAGAGAAGGGGTGGTGGAAATAGTTCGAGGCA < 41bp 0.822000312885325 0.39355362454122 0.31670436 0.18547723 prediction 0.644000625770649 Functional Loss - ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10025085 chr20:10025086 synonymous SNV . 0 22 hPsi_associated_SNPs_5641 0 0 1 0 1 membrane 0.438718592995102 0.438718320502359 0 0 hPsi_site_11058 iPseU_CNN:0;iRNA_PseU:0 11059 chr14 23793435 23793435 1 + A G UCEC 23793434 + 23793414 23793454 41 ACCGCGCCCGGACCACCAACTACAACAGCTCCCGCTCTCGA ACCGCGCCCGGACCACCAACTGCAACAGCTCCCGCTCTCGA < 41bp 0.9034482587288 0.581454318695061 0.67821795 0.33588186 prediction 0.643987880067477 Functional Loss - BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23793434 chr14:23793435 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5642 0 0 1 0 2 unknown 0.438689292762189 0.438719556388955 0.3564359 0 hPsi_site_11059 iPseU_CNN:0.3564359;iRNA_PseU:0 11060 chr2 27169862 27169862 1 + A G SKCM 27169861 + 27169841 27169881 41 GCAGGTCGAGTGGCATTTGGTAAAGGCATTGCCAAGCCCCC GCAGGTCGAGTGGCATTTGGTGAAGGCATTGCCAAGCCCCC < 41bp 0.896278081629985 0.574286209232862 0.6593542 0.29908973 prediction 0.643983744794246 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27169861 chr2:27169862 synonymous SNV . 0 22 hPsi_associated_SNPs_5643 0 0 0 0 1 Ribosome 0.438720291275114 0.438718342387246 0.3187084 0 hPsi_site_11060 iPseU_CNN:0.3187084;iRNA_PseU:0 Gorlin syndrome Gorlin syndrome 11061 chr9 82336733 82336733 1 + T G UCEC 82336732 + 82336712 82336752 41 CCAAGCTCTGGACAGGTGGTTTGGACAACACGGTCAGGTCC CCAAGCTCTGGACAGGTGGTTGGGACAACACGGTCAGGTCC < 41bp 0.821988473839342 0.479572369308815 0.882875 0.49188805 prediction 0.643976947678684 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82336732 chr9:82336733 nonsynonymous SNV 0.733 4 22 hPsi_associated_SNPs_5644 0 0 1 0 2 Endoplasmic reticulum 0.43903728106726 0.437615017213425 0.76575 0 hPsi_site_11061 iPseU_CNN:0.76575;iRNA_PseU:0 11062 chr2 70131502 70131502 1 + A G SKCM 70131501 + 70131481 70131521 41 TGGTCAGAGAGTGGATTTTGTATTTTGTATTTAACTTGCAT TGGTCAGAGAGTGGATTTTGTGTTTTGTATTTAACTTGCAT < 41bp 0.821971573992478 0.444939230989552 0.22803083 0.1962677 prediction 0.643943147984955 Functional Loss - SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70131501 chr2:70131502 synonymous SNV . 0 22 hPsi_associated_SNPs_5645 0 0 1 0 1 Ribosome 0.438656175419386 0.438710368582007 0 0 hPsi_site_11062 iPseU_CNN:0;iRNA_PseU:0 11063 chr12 124132581 124132581 1 + T G UCEC 124132580 + 124132560 124132600 41 ACCCTGGCAACCCTCCTGAATTTAATCCCTCTGGGAGTAAA ACCCTGGCAACCCTCCTGAATGTAATCCCTCTGGGAGTAAA < 41bp 0.821957341839882 0.498407818039841 0.51878417 0.3483943 prediction 0.643914683679764 Functional Loss - GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124132580 chr12:124132581 nonsynonymous SNV 0.715 0 22 hPsi_associated_SNPs_5646 0 0 1 0 2 Cytosol 0.438718593010402 0.438718593506464 0.03756834 0 hPsi_site_11063 iPseU_CNN:0.03756834;iRNA_PseU:0 11064 chr17 7918326 7918326 1 + A G UCEC 7918325 + 7918305 7918345 41 TGGACCTGCTCAACGATCTCTACACACTCTTTGATGCCATC TGGACCTGCTCAACGATCTCTGCACACTCTTTGATGCCATC < 41bp 0.821941500258234 0.414006535587686 0.42483085 0.2430447 prediction 0.643883000516468 Functional Loss - GUCY2D ENSG00000132518 CDS Human protein_coding chr17:7918325 chr17:7918326 nonsynonymous SNV 0.984 5 22 hPsi_associated_SNPs_5647 0 0 0 0 1 exosome 0.419863622606498 0.4150215407447 0 0 hPsi_site_11064 iPseU_CNN:0;iRNA_PseU:0 11065 chr12 108104226 108104226 1 + T G UCS 108104225 + 108104205 108104245 41 TTGCCCTGATTTGCCATTTATTTATGCCTTTGGAGGTCAAA TTGCCCTGATTTGCCATTTATGTATGCCTTTGGAGGTCAAA < 41bp 0.821939479354889 0.49473722760888 0.32757723 0.36665115 prediction 0.643878958709777 Functional Loss - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108104225 chr12:108104226 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5648 0 0 1 0 2 Ribosome 0.438614531596038 0.437997594676091 0 0 hPsi_site_11065 iPseU_CNN:0;iRNA_PseU:0 11066 chr1 16354590 16354590 1 + A G rs12126269 16354589 + 16354569 16354609 41 GCTTCATCAAGACCAATCGGTACAGCTCCAAACTGCTGGCT GCTTCATCAAGACCAATCGGTGCAGCTCCAAACTGCTGGCT < 41bp 0.904754562577356 0.582850966735854 0.98710775 0.793782 prediction 0.643807191683005 Functional Loss - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16354589 chr1:16354590 nonsynonymous SNV 0.072 1 22 hPsi_associated_SNPs_5649 0 0 0 1 2 Endoplasmic reticulum 0.438718592994603 0.438718592984591 0.3866515 0 hPsi_site_11066 iPseU_CNN:0.3866515;iRNA_PseU:0 11067 chr7 65225472 65225472 1 + A C rs527999874 65225471 + 65225451 65225491 41 GCAGAAGCCCTGAATAAATATAAGCTCAGTGTAAAGGGCAA GCAGAAGCCCTGAATAAATATCAGCTCAGTGTAAAGGGCAA < 41bp 0.853894766346273 0.532041189526454 0.3418184 0.21503004 prediction 0.643707153639638 Functional Loss - CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65225471 chr7:65225472 . . 0 22 hPsi_associated_SNPs_5650 0 0 0 2 2 unknown 0.438651613191212 0.43871640506308 0 0 hPsi_site_11067 iPseU_CNN:0;iRNA_PseU:0 11068 chr19 7670145 7670145 1 + A G COAD 7670144 + 7670124 7670164 41 CGGAGCTGTGGGAGCCCTTCTATACCGACCAGTACGCGCAG CGGAGCTGTGGGAGCCCTTCTGTACCGACCAGTACGCGCAG < 41bp 0.901848096704243 0.580001026930167 0.82507086 0.40731338 prediction 0.643694139548151 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670144 chr19:7670145 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_5651 0 0 0 0 1 nucleus 0.438632315209641 0.438457276664818 0.65014172 0 hPsi_site_11068 iPseU_CNN:0.65014172;iRNA_PseU:0 not specified not specified 11069 chr1 248569542 248569542 1 + A G LUSC 248569541 + 248569521 248569561 41 CTTATTTTTGCCATCATCTCTATCATCTTCTTCACCGCACT CTTATTTTTGCCATCATCTCTGTCATCTTCTTCACCGCACT < 41bp 0.882458539699549 0.560618153324536 0.5260578 0.3182965 prediction 0.643680772750026 Functional Loss - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248569541 chr1:248569542 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_5652 0 0 0 0 0 unknown 0.438818454304698 0.438883767760623 0.0521156 0 hPsi_site_11069 iPseU_CNN:0.0521156;iRNA_PseU:0 11070 chr7 76112227 76112227 1 + A G COAD 76112226 + 76112206 76112246 41 CCATGACCAACCTCCCTGCATACCCCGTCCCCCAGCACCCC CCATGACCAACCTCCCTGCATGCCCCGTCCCCCAGCACCCC < 41bp 0.821831443693664 0.399692524870485 0.71395135 0.37748078 prediction 0.643662887387328 Functional Loss - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112226 chr7:76112227 nonsynonymous SNV 0.408 1 22 hPsi_associated_SNPs_5653 0 0 1 0 0 Nucleus 0.438719417220637 0.438718594491455 0.4279027 0 hPsi_site_11070 iPseU_CNN:0.4279027;iRNA_PseU:0 11071 chr1 43166597 43166597 1 + A G UCEC 43166596 + 43166576 43166616 41 CGCAGACGCCCAGAAAACCCTAAACCACAAGATGGCAAAGA CGCAGACGCCCAGAAAACCCTGAACCACAAGATGGCAAAGA < 41bp 0.821826394122562 0.412061236241514 0.39575422 0.23380241 prediction 0.643652788245123 Functional Loss - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43166596 chr1:43166597 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5654 0 0 0 0 0 Cytosol 0.438714896291753 0.438717521251408 0 0 hPsi_site_11071 iPseU_CNN:0;iRNA_PseU:0 11072 chr15 39874829 39874829 1 + A G PRAD 39874828 + 39874808 39874848 41 AGGAAGACAGGGCCCAGCTGTACATCGACTGTGAAAAGATG AGGAAGACAGGGCCCAGCTGTGCATCGACTGTGAAAAGATG < 41bp 0.821819141636858 0.39788300502288 0.73290205 0.2548275 prediction 0.643638283273716 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874828 chr15:39874829 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5655 0 0 0 0 0 cytosol 0.437641546066547 0.437091366582389 0.4658041 0 hPsi_site_11072 iPseU_CNN:0.4658041;iRNA_PseU:0 11073 chr14 70926047 70926047 1 + A G COAD 70926046 + 70926026 70926066 41 ATTGGTGAAGTGAAAGATGGTACTGTGTGTGGCCCAGGAAA ATTGGTGAAGTGAAAGATGGTGCTGTGTGTGGCCCAGGAAA < 41bp 0.821819058997237 0.427341678955164 0.5891569 0.32168463 prediction 0.643638117994474 Functional Loss - ADAM21 ENSG00000139985 CDS Human protein_coding chr14:70926046 chr14:70926047 nonsynonymous SNV 0.697 1 22 hPsi_associated_SNPs_5656 0 0 0 0 0 exosome 0.438277189146647 0.438863502184141 0.1783138 0 hPsi_site_11073 iPseU_CNN:0.1783138;iRNA_PseU:0 11074 chr4 17524616 17524616 1 + A G UCEC 17524615 + 17524595 17524635 41 TTAACATGATCCAGGTCCCGTACCGGGCAGTCAGCGGTCCT TTAACATGATCCAGGTCCCGTGCCGGGCAGTCAGCGGTCCT < 41bp 0.903574930583717 0.581762744006709 0.92156374 0.31082034 prediction 0.643624373154017 Functional Loss - CLRN2 ENSG00000249581 CDS Human protein_coding chr4:17524615 chr4:17524616 nonsynonymous SNV 0.023 3 22 hPsi_associated_SNPs_5657 0 0 0 0 1 unknown 0.438734451625257 0.438723333108709 0.84312748 0 hPsi_site_11074 iPseU_CNN:0.84312748;iRNA_PseU:0 11075 chr19 37726531 37726531 1 + A G STAD 37726530 + 37726510 37726550 41 GGACCCTGTTCAGAGGGACTTATACAGAGATGTGATGTTGG GGACCCTGTTCAGAGGGACTTGTACAGAGATGTGATGTTGG < 41bp 0.862710267799757 0.540908951382824 0.2859028 0.19400138 prediction 0.643602632833866 Functional Loss - ZNF383 ENSG00000188283 CDS Human protein_coding chr19:37726530 chr19:37726531 synonymous SNV . 0 22 hPsi_associated_SNPs_5658 0 0 1 0 2 cytosol 0.438718531106476 0.438718566824509 0 0 hPsi_site_11075 iPseU_CNN:0;iRNA_PseU:0 11076 chr20 31672763 31672763 1 + A G STAD 31672762 + 31672742 31672782 41 TCCTGCCCGGCGTGGGTGTCTACCTGAGCTTGTACACCCGT TCCTGCCCGGCGTGGGTGTCTGCCTGAGCTTGTACACCCGT < 41bp 0.821774823948021 0.404109500678277 0.6032162 0.33950984 prediction 0.643549647896041 Functional Loss - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31672762 chr20:31672763 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5659 0 0 0 0 2 exosome 0.437464360766512 0.438523728488388 0.2064324 0 hPsi_site_11076 iPseU_CNN:0.2064324;iRNA_PseU:0 11077 chr2 184022174 184022174 1 + T G BRCA 184022173 + 184022153 184022193 41 GGACAACTCTTTTTTTCAGGTTTCCTCAAGCATCTGCTTCC GGACAACTCTTTTTTTCAGGTGTCCTCAAGCATCTGCTTCC < 41bp 0.826463548539546 0.504713471375822 0.4099161 0.25909582 prediction 0.643500154327447 Functional Loss - NUP35 ENSG00000163002 CDS Human protein_coding chr2:184022173 chr2:184022174 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5660 0 0 1 0 2 chromatin 0.438718592995097 0.438718593022308 0 0 hPsi_site_11077 iPseU_CNN:0;iRNA_PseU:0 11078 chr22 25853306 25853306 1 + A G UCEC 25853305 + 25853285 25853325 41 GGAAATCATAGATGACGATGTACCCAGCTTCCACGCCCATG GGAAATCATAGATGACGATGTGCCCAGCTTCCACGCCCATG < 41bp 0.821747188794316 0.413288098365512 0.6893994 0.24075049 prediction 0.643494377588633 Functional Loss - CRYBB2P1 ENSG00000100058 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:25853305 chr22:25853306 . . 0 22 hPsi_associated_SNPs_5661 0 0 1 0 2 unknown 0.438718522809314 0.438712770222912 0.3787988 0 hPsi_site_11078 iPseU_CNN:0.3787988;iRNA_PseU:0 11079 chr1 11897117 11897117 1 + A G UCEC 11897116 + 11897096 11897136 41 GGAGCCAGTCCATGAAGTCCTACCCATCCAGCGAGCTACGG GGAGCCAGTCCATGAAGTCCTGCCCATCCAGCGAGCTACGG < 41bp 0.821730682594101 0.389206637803282 0.34052098 0.19463736 prediction 0.643461365188203 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897116 chr1:11897117 nonsynonymous SNV 0.429 5 22 hPsi_associated_SNPs_5662 0 0 1 0 2 Endoplasmic reticulum 0.438718592995098 0.438718592995769 0 0 hPsi_site_11079 iPseU_CNN:0;iRNA_PseU:0 11080 chr9 116021003 116021003 1 + T G UCEC 116021002 + 116020982 116021022 41 GGAGCTTTTGTGGCAGTGTTTTTACTAGCAATGTTCTATGA GGAGCTTTTGTGGCAGTGTTTGTACTAGCAATGTTCTATGA < 41bp 0.829618045683268 0.507907932144257 0.2667207 0.19934663 prediction 0.643420227078022 Functional Loss - SLC31A1 ENSG00000136868 CDS Human protein_coding chr9:116021002 chr9:116021003 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5663 0 0 1 0 1 Ribosome 0.438515259932415 0.435619500076029 0 0 hPsi_site_11080 iPseU_CNN:0;iRNA_PseU:0 11081 chr17 32961898 32961898 1 + A G LUSC 32961897 + 32961877 32961917 41 GCCGTGGCTGCACCCTGCAGTACCAGCATGCCACCCTGCAG GCCGTGGCTGCACCCTGCAGTGCCAGCATGCCACCCTGCAG < 41bp 0.821704669777029 0.396180600467945 0.35233927 0.20120755 prediction 0.643409339554058 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32961897 chr17:32961898 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5664 0 0 0 0 1 exosome 0.438793492287209 0.438719714631903 0 0 hPsi_site_11081 iPseU_CNN:0;iRNA_PseU:0 11082 chr10 93723909 93723909 1 + A G LUAD 93723908 + 93723888 93723928 41 ACAGCTTCAACAAATAGTATTATGACTCTCCTTTCATCCTT ACAGCTTCAACAAATAGTATTGTGACTCTCCTTTCATCCTT < 41bp 0.821695973887327 0.415998226419021 0.63821805 0.63332033 prediction 0.643391947774654 Functional Loss - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93723908 chr10:93723909 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5665 0 0 1 0 2 Nucleus 0.438968131372172 0.437454796085409 0.00979543999999999 0 hPsi_site_11082 iPseU_CNN:0.00979543999999999;iRNA_PseU:0 11083 chr1 206821133 206821133 1 + A G COAD 206821132 + 206821112 206821152 41 ATGATGATGCAGATGGGGCCTATATTCATGTACCTCGAGAC ATGATGATGCAGATGGGGCCTGTATTCATGTACCTCGAGAC < 41bp 0.896676102858876 0.575003578603772 0.2939604 0.21926978 prediction 0.643345048510208 Functional Loss - DYRK3 ENSG00000143479 CDS Human protein_coding chr1:206821132 chr1:206821133 nonsynonymous SNV 0.799 4 22 hPsi_associated_SNPs_5666 0 0 0 0 0 Cytosol 0.438976161117125 0.438577471252346 0 0 hPsi_site_11083 iPseU_CNN:0;iRNA_PseU:0 11084 chr10 129877846 129877846 1 + A G ESCA 129877845 + 129877825 129877865 41 GCCGGAGCTGGGCGAACAGGTACATTCATAGCCCTCAGCAA GCCGGAGCTGGGCGAACAGGTGCATTCATAGCCCTCAGCAA < 41bp 0.905862220633376 0.584192321748612 0.8512761 0.26957905 prediction 0.643339797769527 Functional Loss - PTPRE ENSG00000132334 CDS Human protein_coding chr10:129877845 chr10:129877846 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5667 0 0 0 0 1 Ribosome 0.438698706006314 0.438726137759133 0.7025522 0 hPsi_site_11084 iPseU_CNN:0.7025522;iRNA_PseU:0 11085 chr1 53550549 53550549 1 + A G rs575081004 53550548 + 53550528 53550568 41 GACATGTGTATGCGTATGCATACACACCACACACACACACA GACATGTGTATGCGTATGCATGCACACCACACACACACACA < 41bp 0.88003962937082 0.558376653190207 0.9220227 0.6401382 prediction 0.643325952361226 Functional Loss - PODN ENSG00000232993 ncRNA_intronic Human antisense chr1:53550548 chr1:53550549 . . 0 22 hPsi_associated_SNPs_5668 0 0 0 0 0 Cytosol 0.423217974116509 0.432894933297942 0.563769 0 hPsi_site_11085 iPseU_CNN:0.563769;iRNA_PseU:0 11086 chr16 58071482 58071482 1 + A G LUAD 58071481 + 58071461 58071501 41 TTGCAGAGATGCAGCGCTTCTACGGGATCCCAGTCACCGGT TTGCAGAGATGCAGCGCTTCTGCGGGATCCCAGTCACCGGT < 41bp 0.82165129192712 0.403968465363783 0.6964045 0.3891412 prediction 0.64330258385424 Functional Loss - MMP15 ENSG00000102996 CDS Human protein_coding chr16:58071481 chr16:58071482 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5669 0 0 0 0 1 Ribosome 0.438718581486172 0.438679435939671 0.392809 0 hPsi_site_11086 iPseU_CNN:0.392809;iRNA_PseU:0 11087 chrX 37526656 37526656 1 + T G UCEC 37526655 + 37526635 37526675 41 GCTAAAGAAGGGGCCTGGGATTTGCCATGGAGTAGCCGGCA GCTAAAGAAGGGGCCTGGGATGTGCCATGGAGTAGCCGGCA < 41bp 0.838288781400836 0.516647214245193 0.32018632 0.2570085 prediction 0.643283134311285 Functional Loss - LANCL3 ENSG00000147036 CDS Human protein_coding chrX:37526655 chrX:37526656 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5670 0 0 0 0 1 chromatin 0.438718592995102 0.438718574397821 0 0 hPsi_site_11087 iPseU_CNN:0;iRNA_PseU:0 11088 chr17 35830563 35830563 1 + A G STAD 35830562 + 35830542 35830582 41 GAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCA GAAGAGCGCCTTAAACGCACTGTGCTCTCAGAAGTTCTCCA < 41bp 0.908642246827847 0.587006280593947 0.87275004 0.5139962 prediction 0.6432719324678 Functional Loss - TADA2A ENSG00000108264 CDS Human other chr17:35830562 chr17:35830563 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5671 0 0 1 0 2 chromatin 0.438282476928681 0.438521506384155 0.71750768 0 hPsi_site_11088 iPseU_CNN:0.71750768;iRNA_PseU:0 11089 chr3 132196917 132196917 1 + A G GBM 132196916 + 132196896 132196936 41 TACAAGCCCTTGCTATTGTTTATGGCAGATGTCACGAAGAA TACAAGCCCTTGCTATTGTTTGTGGCAGATGTCACGAAGAA < 41bp 0.821620948606144 0.42628819331402 0.6474116 0.3247412 prediction 0.643241897212288 Functional Loss - DNAJC13 ENSG00000138246 CDS Human protein_coding chr3:132196916 chr3:132196917 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5672 0 0 0 0 1 Nucleus 0.439258041973781 0.438722958112555 0.2948232 0 hPsi_site_11089 iPseU_CNN:0.2948232;iRNA_PseU:0 11090 chr15 31233935 31233935 1 + A G rs149870187 31233934 + 31233914 31233954 41 TGCCGCAGCATCCTGCTCAGTACGTCGACTTCATCAGCCAG TGCCGCAGCATCCTGCTCAGTGCGTCGACTTCATCAGCCAG < 41bp 0.821590655770609 0.412210423047513 0.49750865 0.19107783 prediction 0.643181311541219 Functional Loss - MTMR10 ENSG00000166912 CDS Human protein_coding chr15:31233934 chr15:31233935 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5673 0 0 0 0 0 Cytosol 0.438740376344131 0.438725573257102 0 0 hPsi_site_11090 iPseU_CNN:0;iRNA_PseU:0 11091 chr11 118405641 118405641 1 + A G rs3741323 118405640 + 118405620 118405660 41 GTGTGGCATGGCCTGCTGTATACCCCACCCCAGTACTCCAC GTGTGGCATGGCCTGCTGTATGCCCCACCCCAGTACTCCAC < 41bp 0.821589775960116 0.432344118698015 0.5637686 0.23897457 prediction 0.643179551920232 Functional Loss - TMEM25 ENSG00000149582 UTR3 Human protein_coding chr11:118405640 chr11:118405641 . . 0 22 hPsi_associated_SNPs_5674 0 0 0 0 0 Nucleus 0.43872526967701 0.438717428203437 0.1275372 0 hPsi_site_11091 iPseU_CNN:0.1275372;iRNA_PseU:0 11092 chr17 39998135 39998135 1 + T G UCEC 39998134 + 39998114 39998154 41 GGTATACAACATCCCTGGCATTTCTCCCGACATGATGAAGC GGTATACAACATCCCTGGCATGTCTCCCGACATGATGAAGC < 41bp 0.834411819278545 0.512835180550454 0.26509166 0.1940372 prediction 0.643153277456182 Functional Loss - KLHL10 ENSG00000161594 CDS Human protein_coding chr17:39998134 chr17:39998135 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_5675 0 0 0 0 1 exosome 0.438718592996382 0.438718578314624 0 0 hPsi_site_11092 iPseU_CNN:0;iRNA_PseU:0 11093 chr1 34684353 34684353 1 + A C PRAD 34684352 + 34684332 34684372 41 TTCTTCCAGTGGGAATGGCATAAACTTTTAGATCTCCTCTT TTCTTCCAGTGGGAATGGCATCAACTTTTAGATCTCCTCTT < 41bp 0.847029439729165 0.525475455288305 0.54631525 0.36667162 prediction 0.64310796888172 Functional Loss - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34684352 chr1:34684353 synonymous SNV . 0 22 hPsi_associated_SNPs_5676 0 0 0 0 1 unknown 0.438718592995102 0.438718593001138 0.0926305000000001 0 hPsi_site_11093 iPseU_CNN:0.0926305000000001;iRNA_PseU:0 11094 chr5 179025775 179025775 1 + T G KIRC 179025774 + 179025754 179025794 41 TTACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGA TTACAGCACGAGAAAGACACTGCCTCTCTACTCAGGATGGA < 41bp 0.843131415235942 0.521583298391479 0.630373 0.3240226 prediction 0.643096233688926 Functional Loss - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179025774 chr5:179025775 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5677 0 0 1 0 2 Ribosome 0.435347125286416 0.434836624399646 0.260746 0 hPsi_site_11094 iPseU_CNN:0.260746;iRNA_PseU:0 11095 chrX 37961633 37961633 1 + A C UCEC 37961632 + 37961612 37961652 41 TGAAGAAAGCATTGATGCCTTAGTGTCCTCGCAGTTATCTA TGAAGAAAGCATTGATGCCTTCGTGTCCTCGCAGTTATCTA < 41bp 0.821510517613921 0.451402269697652 0.27143267 0.22469541 prediction 0.643021035227842 Functional Loss - SYTL5 ENSG00000147041 CDS Human protein_coding chrX:37961632 chrX:37961633 nonsynonymous SNV 0.915 1 22 hPsi_associated_SNPs_5678 0 0 0 0 2 cytosol 0.441545249434929 0.438739881261182 0 0 hPsi_site_11095 iPseU_CNN:0;iRNA_PseU:0 11096 chr7 139575421 139575421 1 + A G HNSC 139575420 + 139575400 139575440 41 AAATGGAGCTCAGAAAGCTGTATGGACCTCTGTGTGGGTAA AAATGGAGCTCAGAAAGCTGTGTGGACCTCTGTGTGGGTAA < 41bp 0.821478898516803 0.410890924110216 0.6404667 0.42950112 prediction 0.642957797033607 Functional Loss - TBXAS1 ENSG00000059377 CDS Human protein_coding chr7:139575420 chr7:139575421 nonsynonymous SNV 0.212 4 22 hPsi_associated_SNPs_5679 0 0 0 0 2 Endoplasmic reticulum 0.43871854666374 0.438713402961818 0.2809334 0 hPsi_site_11096 iPseU_CNN:0.2809334;iRNA_PseU:0 11097 chr4 129029409 129029409 1 + A G rs567975672 129029408 + 129029388 129029428 41 ATGTTTTCTGTTTCCAGGGTTATGTACTTGTGTCCAGATGA ATGTTTTCTGTTTCCAGGGTTGTGTACTTGTGTCCAGATGA < 41bp 0.82144650826429 0.471852496601723 0.36409706 0.29581362 prediction 0.642893016528581 Functional Loss - LARP1B ENSG00000138709 UTR3 Human protein_coding chr4:129029408 chr4:129029409 . . 0 22 hPsi_associated_SNPs_5680 0 0 1 0 0 Nucleus 0.438716375545988 0.438734307028504 0 0 hPsi_site_11097 iPseU_CNN:0;iRNA_PseU:0 11098 chr16 2025206 2025206 1 + A C rs8053843 2025205 + 2025185 2025225 41 CAGCTCCGGCCGTGACAAGATATGTATCATCTGGGACCTTC CAGCTCCGGCCGTGACAAGATCTGTATCATCTGGGACCTTC < 41bp 0.821441186128499 0.454080461008408 0.49683252 0.41228053 prediction 0.642882372256997 Functional Loss - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2025205 chr16:2025206 synonymous SNV . 0 22 hPsi_associated_SNPs_5681 0 0 1 0 2 Nucleus 0.435451293906928 0.438257039179865 0 0 hPsi_site_11098 iPseU_CNN:0;iRNA_PseU:0 11099 chr5 149907533 149907533 1 + T G rs2273235 149907532 + 149907512 149907552 41 CCCCGGCGAGGACTGGACGGTTTTCCAGTCAAATCACTCCA CCCCGGCGAGGACTGGACGGTGTTCCAGTCAAATCACTCCA < 41bp 0.838179785146736 0.516763488801674 0.8284835 0.66473484 prediction 0.642832592690123 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149907532 chr5:149907533 synonymous SNV . 0 22 hPsi_associated_SNPs_5682 0 0 1 0 0 Cytosol 0.438718637555837 0.438722227988692 0.32749732 0 hPsi_site_11099 iPseU_CNN:0.32749732;iRNA_PseU:0 11100 chr19 11657746 11657746 1 + A G LUAD 11657745 + 11657725 11657765 41 CTGTTTGAGAACACCAACCATACACAGGTGCAGTCCACCCT CTGTTTGAGAACACCAACCATGCACAGGTGCAGTCCACCCT < 41bp 0.821416222361209 0.394239833859222 0.61537343 0.2587487 prediction 0.642832444722418 Functional Loss - CNN1 ENSG00000130176 CDS Human protein_coding chr19:11657745 chr19:11657746 nonsynonymous SNV 0.734 0 22 hPsi_associated_SNPs_5683 0 0 0 0 2 Cytosol 0.449652021921723 0.440512787267344 0.23074686 0 hPsi_site_11100 iPseU_CNN:0.23074686;iRNA_PseU:0 11101 chr18 33271052 33271052 1 + A G UCEC 33271051 + 33271031 33271071 41 TGTTTCGGAAAGCTACACCTTACACGTTTCCAGGAGGCACA TGTTTCGGAAAGCTACACCTTGCACGTTTCCAGGAGGCACA < 41bp 0.821416196137778 0.407037508030163 0.32960725 0.21601754 prediction 0.642832392275556 Functional Loss - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33271051 chr18:33271052 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5684 0 0 1 0 1 Endoplasmic reticulum 0.438670393337678 0.438718084989981 0 0 hPsi_site_11101 iPseU_CNN:0;iRNA_PseU:0 Hereditary Multiple Osteochondromatosis Hereditary Multiple Osteochondromatosis 11102 chr20 31383299 31383299 1 + A G rs143462810 31383298 + 31383278 31383318 41 AGCGCCTCAAGACAAATTGCTATAACAACGGCAAAGACCGA AGCGCCTCAAGACAAATTGCTGTAACAACGGCAAAGACCGA < 41bp 0.82140906275871 0.423098714791932 0.27383518 0.26758575 prediction 0.642818125517419 Functional Loss - DNMT3B ENSG00000088305 CDS Human protein_coding chr20:31383298 chr20:31383299 nonsynonymous SNV 0.816 1 22 hPsi_associated_SNPs_5685 1 0 0 0 2 chromatin 0.438718581947981 0.438718521850262 0 0 hPsi_site_11102 iPseU_CNN:0;iRNA_PseU:0 11103 chr6 43406463 43406463 1 + T G COAD 43406462 + 43406442 43406482 41 CCATCCGAGACAACATCCTCTTTGGGAAGACATTTGATGCA CCATCCGAGACAACATCCTCTGTGGGAAGACATTTGATGCA < 41bp 0.851111589481001 0.529712245464538 0.4234052 0.33930045 prediction 0.642798688032926 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43406462 chr6:43406463 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_5686 0 0 1 0 0 chromatin 0.438800340773505 0.438470053218751 0 0 hPsi_site_11103 iPseU_CNN:0;iRNA_PseU:0 11104 chr3 64085551 64085551 1 + A C UCEC 64085552 - 64085532 64085572 41 CAGGAGCACCTATCCCGATTTTCCATGCCTGACCTCAGCAA CAGGAGCACCTATCCCGATTTGCCATGCCTGACCTCAGCAA < 41bp 0.83648111140932 0.515088372492216 0.28195125 0.20881534 prediction 0.642785477834207 Functional Loss - PRICKLE2 ENSG00000163637 CDS Human protein_coding chr3:64085552 chr3:64085551 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_5687 0 0 0 0 1 Endoplasmic reticulum 0.438718613602707 0.438718615348546 0 0 hPsi_site_11104 iPseU_CNN:0;iRNA_PseU:0 11105 chr9 115925107 115925107 1 + A G LUSC 115925106 + 115925086 115925126 41 CTACTTCATCATGCTGGCCGTAATGTCCTACAACACCTGGA CTACTTCATCATGCTGGCCGTGATGTCCTACAACACCTGGA < 41bp 0.898903812037309 0.57751566748826 0.277537 0.1627371 prediction 0.642776289098097 Functional Loss - SLC31A2 ENSG00000136867 CDS Human protein_coding chr9:115925106 chr9:115925107 synonymous SNV . 0 22 hPsi_associated_SNPs_5688 0 0 0 0 1 Ribosome 0.43888617314105 0.438879372322082 0 0 hPsi_site_11105 iPseU_CNN:0;iRNA_PseU:0 11106 chr22 21357312 21357312 1 + A G GBM 21357311 + 21357291 21357331 41 CTGCCATGCCCTCCCCCACGTACCAGTGCACTAAGGCGCAC CTGCCATGCCCTCCCCCACGTGCCAGTGCACTAAGGCGCAC < 41bp 0.893555853791464 0.572185084227239 0.41563237 0.2606216 prediction 0.642741539128451 Functional Loss - THAP7-AS1 ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21357311 chr22:21357312 . . 0 22 hPsi_associated_SNPs_5689 0 0 0 0 0 unknown 0.438591985997389 0.438740644095508 0 0 hPsi_site_11106 iPseU_CNN:0;iRNA_PseU:0 11107 chr20 30366700 30366700 1 + A G rs117528644 30366699 + 30366679 30366719 41 ACATTTGATGAAACAGTTTCTACATATGTGCCCCTTGCACA ACATTTGATGAAACAGTTTCTGCATATGTGCCCCTTGCACA < 41bp 0.821350699122744 0.402790780942404 0.36973453 0.27131593 prediction 0.642701398245488 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30366699 chr20:30366700 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_5690 0 0 1 0 2 Cytosol 0.438728803231063 0.438735748849476 0 0 hPsi_site_11107 iPseU_CNN:0;iRNA_PseU:0 11108 chr5 72864320 72864320 1 + A G rs556396256 72864319 + 72864299 72864339 41 AAAGACACAGCATACTGTGCTACTTTTCGACAAGATGGTAG AAAGACACAGCATACTGTGCTGCTTTTCGACAAGATGGTAG < 41bp 0.821293568853967 0.403317107405567 0.6551762 0.30478203 prediction 0.642587137707935 Functional Loss - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72864319 chr5:72864320 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_5691 0 0 1 0 1 Ribosome 0.438692614257216 0.438778002706426 0.3103524 0 hPsi_site_11108 iPseU_CNN:0.3103524;iRNA_PseU:0 11109 chr6 28268646 28268646 1 + A G UCEC 28268645 + 28268625 28268665 41 GAATATGCTGCAGGAGACATTACCCGAAAAGGGAGAAAAAA GAATATGCTGCAGGAGACATTGCCCGAAAAGGGAGAAAAAA < 41bp 0.821288597114914 0.420179896519778 0.44229284 0.23671499 prediction 0.642577194229828 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28268645 chr6:28268646 nonsynonymous SNV 0.766 2 22 hPsi_associated_SNPs_5692 0 0 1 0 0 nucleoplasm 0.438718592591815 0.438718632843743 0 0 hPsi_site_11109 iPseU_CNN:0;iRNA_PseU:0 11110 chr13 113770076 113770076 1 + A G UCEC 113770075 + 113770055 113770095 41 CCTGTCGGTGCCACGAGGGGTACTCTCTGCTGGCAGACGGG CCTGTCGGTGCCACGAGGGGTGCTCTCTGCTGGCAGACGGG < 41bp 0.821285529568086 0.39296235911358 0.7676654 0.3110289 prediction 0.642571059136172 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113770075 chr13:113770076 nonsynonymous SNV 0.037 4 22 hPsi_associated_SNPs_5693 0 0 1 0 1 insoluble cytoplasm 0.438753658456781 0.439893909850424 0.5353308 0 hPsi_site_11110 iPseU_CNN:0.5353308;iRNA_PseU:0 11111 chr17 34431991 34431991 1 + A G rs371362421 34431990 + 34431970 34432010 41 GCTTCCTCGCAACTTTGTGGTAGATTACTATGAGACCAGCA GCTTCCTCGCAACTTTGTGGTGGATTACTATGAGACCAGCA < 41bp 0.908590457231373 0.587327376672389 0.2173065 0.19412452 prediction 0.642526161117968 Functional Loss - CCL4 ENSG00000129277 CDS Human other chr17:34431990 chr17:34431991 synonymous SNV . 0 22 hPsi_associated_SNPs_5694 0 0 0 0 2 exosome 0.438718592995101 0.438718592995122 0 0 hPsi_site_11111 iPseU_CNN:0;iRNA_PseU:0 11112 chr4 115544577 115544577 1 + A G UCEC 115544576 + 115544556 115544596 41 TTAGCATACGTCCCAGAGTTTAACTCACTCCTCACAGACCG TTAGCATACGTCCCAGAGTTTGACTCACTCCTCACAGACCG < 41bp 0.906381990186294 0.58512257906562 0.83668065 0.52657783 prediction 0.642518822241348 Functional Loss - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544576 chr4:115544577 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_5695 0 0 0 0 0 Ribosome 0.438718429546365 0.438718592739404 0.62020564 0 hPsi_site_11112 iPseU_CNN:0.62020564;iRNA_PseU:0 11113 chr10 5960374 5960374 1 + A G UCEC 5960373 + 5960353 5960393 41 GGGACCCGCACCAGCAGATCTATACCTTCCGGGGTGCGGTC GGGACCCGCACCAGCAGATCTGTACCTTCCGGGGTGCGGTC < 41bp 0.911825969843441 0.590593162514225 0.9515976 0.7411514 prediction 0.642465614658433 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5960373 chr10:5960374 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_5696 0 0 0 0 2 Ribosome 0.438810934280852 0.43947458025942 0.4208924 0 hPsi_site_11113 iPseU_CNN:0.4208924;iRNA_PseU:0 11114 chr19 1257111 1257111 1 + A G STAD 1257110 + 1257090 1257130 41 GGCGGGACGCGCGGGGTCCGTACCACTGGTCACCCAGCCGC GGCGGGACGCGCGGGGTCCGTGCCACTGGTCACCCAGCCGC < 41bp 0.898079508351944 0.57687236121619 0.843917 0.37369072 prediction 0.642414294271507 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1257110 chr19:1257111 nonsynonymous SNV 0.680 3 22 hPsi_associated_SNPs_5697 0 0 1 0 0 chromatin 0.452820258957858 0.438839232166134 0.687834 0 hPsi_site_11114 iPseU_CNN:0.687834;iRNA_PseU:0 11115 chr7 48141551 48141551 1 + A G LUAD 48141550 + 48141530 48141570 41 GAACTGACCGCTATGCCATGTATAAAGTAGGACCGGTGCTG GAACTGACCGCTATGCCATGTGTAAAGTAGGACCGGTGCTG < 41bp 0.821188821364533 0.400946895331268 0.4900542 0.38558662 prediction 0.642377642729066 Functional Loss - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48141550 chr7:48141551 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_5698 0 0 1 0 0 Ribosome 0.440773634771621 0.440064814346624 0 0 hPsi_site_11115 iPseU_CNN:0;iRNA_PseU:0 11116 chr19 42353008 42353008 1 + A G COAD 42353007 + 42352987 42353027 41 CAGTGGTGTGCCGCCTGCTGTACCAAGAACCTGCTGTCTCT CAGTGGTGTGCCGCCTGCTGTGCCAAGAACCTGCTGTCTCT < 41bp 0.8211845906259 0.394902859970624 0.6901254 0.37181348 prediction 0.6423691812518 Functional Loss - DMRTC2 ENSG00000142025 CDS Human protein_coding chr19:42353007 chr19:42353008 nonsynonymous SNV 0.981 0 22 hPsi_associated_SNPs_5699 0 0 0 0 1 exosome 0.438827868613309 0.438726920024765 0.3802508 0 hPsi_site_11116 iPseU_CNN:0.3802508;iRNA_PseU:0 11117 chr1 33060722 33060722 1 + A G rs143147129 33060721 + 33060701 33060741 41 GGTGAAGCGGAAGGCAGACCTAAAGCGCCACCTTCGTTGTC GGTGAAGCGGAAGGCAGACCTGAAGCGCCACCTTCGTTGTC < 41bp 0.821180645150581 0.407236445053384 0.23177406 0.13621235 prediction 0.642361290301162 Functional Loss - ZBTB8A ENSG00000160062 CDS Human protein_coding chr1:33060721 chr1:33060722 synonymous SNV . 0 22 hPsi_associated_SNPs_5700 0 0 0 0 1 Nucleus 0.438718244072599 0.438735125695758 0 0 hPsi_site_11117 iPseU_CNN:0;iRNA_PseU:0 11118 chr11 58919457 58919457 1 + A G rs368439990 58919456 + 58919436 58919476 41 AGTGAGAATAGTAGCTTATATATGGCTCTCAACACTCTCCA AGTGAGAATAGTAGCTTATATGTGGCTCTCAACACTCTCCA < 41bp 0.884944545402312 0.563801715337908 0.6723544 0.47891122 prediction 0.642285660128808 Functional Loss - FAM111A ENSG00000166801 CDS Human protein_coding chr11:58919456 chr11:58919457 nonsynonymous SNV 0.036 0 22 hPsi_associated_SNPs_5701 0 0 1 0 0 Nucleus 0.438719527649774 0.438724021321583 0.3447088 0 hPsi_site_11118 iPseU_CNN:0.3447088;iRNA_PseU:0 11119 chr17 60814662 60814662 1 + A G STAD 60814661 + 60814641 60814681 41 TGGCCTCTTCAGCTTAGTGTTACACATCAGGCCTTCTTGTT TGGCCTCTTCAGCTTAGTGTTGCACATCAGGCCTTCTTGTT < 41bp 0.89332401957573 0.572184890836524 0.7511506 0.22635588 prediction 0.642278257478412 Functional Loss - MARCH10 ENSG00000173838 CDS Human protein_coding chr17:60814661 chr17:60814662 synonymous SNV . 0 22 hPsi_associated_SNPs_5702 0 0 0 0 0 nucleus 0.438718912586052 0.438719805798068 0.5023012 0 hPsi_site_11119 iPseU_CNN:0.5023012;iRNA_PseU:0 11120 chr6 27222539 27222539 1 + A G rs1062834 27222538 + 27222518 27222558 41 ACTGCCCTCCCAGCTAGACCTATGTGAGCAGGTGTTTGGGC ACTGCCCTCCCAGCTAGACCTGTGTGAGCAGGTGTTTGGGC < 41bp 0.821137079416945 0.397276502697721 0.27840805 0.25504386 prediction 0.64227415883389 Functional Loss - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27222538 chr6:27222539 synonymous SNV . 0 22 hPsi_associated_SNPs_5703 0 0 1 2 1 Cytosol 0.438730240674874 0.441156895988844 0 0 hPsi_site_11120 iPseU_CNN:0;iRNA_PseU:0 11121 chr14 24108125 24108125 1 + A G UCEC 24108124 + 24108104 24108144 41 GGCTGGTTTCATCCCTGTGCTAGGCTTTCTGTGAGGATGAG GGCTGGTTTCATCCCTGTGCTGGGCTTTCTGTGAGGATGAG < 41bp 0.821131548034223 0.407516142940871 0.31179357 0.25291348 prediction 0.642263096068445 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108124 chr14:24108125 nonsynonymous SNV 0.567 1 22 hPsi_associated_SNPs_5704 0 0 1 0 2 Ribosome 0.438718613706474 0.438718592948427 0 0 hPsi_site_11121 iPseU_CNN:0;iRNA_PseU:0 11122 chr11 10794765 10794765 1 + T G READ 10794764 + 10794744 10794784 41 AGACCAAAAATATTCTTATGTTTACTGGTGAGACTGAAGCA AGACCAAAAATATTCTTATGTGTACTGGTGAGACTGAAGCA < 41bp 0.834401220133156 0.513270868778517 0.32084036 0.30097938 prediction 0.642260702709277 Functional Loss - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10794764 chr11:10794765 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5705 0 0 1 0 2 Cytosol 0.43871931592259 0.438796061114057 0 0 hPsi_site_11122 iPseU_CNN:0;iRNA_PseU:0 11123 chr17 3119736 3119736 1 + A G UCEC 3119735 + 3119715 3119755 41 AAAAGACGCAGTGATCACTGTAATGTACACGGCAGTGACCC AAAAGACGCAGTGATCACTGTGATGTACACGGCAGTGACCC < 41bp 0.885646194718212 0.564527560862379 0.79365194 0.31969708 prediction 0.642237267711666 Functional Loss - OR1A1 ENSG00000172146 CDS Human protein_coding chr17:3119735 chr17:3119736 synonymous SNV . 0 22 hPsi_associated_SNPs_5706 0 0 0 0 0 unknown 0.438699469727159 0.43863695794226 0.58730388 0 hPsi_site_11123 iPseU_CNN:0.58730388;iRNA_PseU:0 11124 chr17 42635860 42635860 1 + A G OV 42635859 + 42635839 42635879 41 CACTGTCACCACGTACTTGGTAGACATGCAGCGCTTCCGCT CACTGTCACCACGTACTTGGTGGACATGCAGCGCTTCCGCT < 41bp 0.897139668737914 0.576046183490698 0.4160958 0.23725355 prediction 0.642186970494433 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42635859 chr17:42635860 synonymous SNV . 0 22 hPsi_associated_SNPs_5707 0 0 0 0 0 exosome 0.438718484921051 0.438718630514035 0 0 hPsi_site_11124 iPseU_CNN:0;iRNA_PseU:0 11125 chr9 100767349 100767349 1 + A G STAD 100767348 + 100767328 100767368 41 AGCTCCTGCCCCAGCTTACCTACTTGGATGGCTATGACCGA AGCTCCTGCCCCAGCTTACCTGCTTGGATGGCTATGACCGA < 41bp 0.821087090799634 0.39860925740389 0.74209785 0.36648804 prediction 0.642174181599268 Functional Loss - ANP32B ENSG00000136938 CDS Human protein_coding chr9:100767348 chr9:100767349 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_5708 0 0 1 0 1 Cytosol 0.438718596359844 0.438718599751301 0.4841957 0 hPsi_site_11125 iPseU_CNN:0.4841957;iRNA_PseU:0 11126 chr3 9803194 9803194 1 + A G STAD 9803193 + 9803173 9803213 41 AGCAATCCACAGCCTTGCTGTAGGGCTTCTGGGCCAGGACT AGCAATCCACAGCCTTGCTGTGGGGCTTCTGGGCCAGGACT < 41bp 0.82108302495658 0.432069892748361 0.59843177 0.28793734 prediction 0.642166049913159 Functional Loss - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803193 chr3:9803194 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5709 0 0 0 0 0 Ribosome 0.438718592066775 0.438718586398099 0.19686354 0 hPsi_site_11126 iPseU_CNN:0.19686354;iRNA_PseU:0 11127 chr3 30715613 30715613 1 + A G STAD 30715612 + 30715592 30715632 41 TATAGGTGGGAACTGCAAGATACATGGCTCCAGAAGTCCTA TATAGGTGGGAACTGCAAGATGCATGGCTCCAGAAGTCCTA < 41bp 0.82107657948816 0.403170831670152 0.8549006 0.3318296 prediction 0.64215315897632 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30715612 chr3:30715613 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5710 1 0 1 0 1 Cytosol 0.438717691571773 0.438718566152001 0.7098012 0 hPsi_site_11127 iPseU_CNN:0.7098012;iRNA_PseU:0 11128 chr19 44680256 44680256 1 + A G UCEC 44680255 + 44680235 44680275 41 CAATCAGGAGAGAAGTCTCTTACATGTGTTGAGCGTGGAAA CAATCAGGAGAGAAGTCTCTTGCATGTGTTGAGCGTGGAAA < 41bp 0.821027383709475 0.42504001264958 0.2974939 0.26305512 prediction 0.64205476741895 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680255 chr19:44680256 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_5711 0 0 1 0 0 Cytosol 0.438976216784108 0.43870965318814 0 0 hPsi_site_11128 iPseU_CNN:0;iRNA_PseU:0 11129 chr2 133080107 133080107 1 + A G rs541088139 133080106 + 133080086 133080126 41 GATAGGGGTGAGGTGTGGTCTATCTCCTGCTTCACCCAGGC GATAGGGGTGAGGTGTGGTCTGTCTCCTGCTTCACCCAGGC < 41bp 0.821023924713005 0.487130979142775 0.5330558 0.41781592 prediction 0.642047849426009 Functional Loss - ZNF806;FAM201B ENSG00000018607;ENSG00000272769 intergenic Human other chr2:133080106 chr2:133080107 . . 0 22 hPsi_associated_SNPs_5712 0 0 0 0 0 unknown 0.438714975844744 0.4386754855102 0.0661115999999999 0 hPsi_site_11129 iPseU_CNN:0.0661115999999999;iRNA_PseU:0 11130 chr2 159488385 159488385 1 + A G UCEC 159488384 + 159488364 159488404 41 GGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCATGGA GGACCTATTACAGCCCAGTGTGCCGCAGCCCAAACCATGGA < 41bp 0.821021460408579 0.395962240453813 0.4538415 0.23147425 prediction 0.642042920817159 Functional Loss - PKP4 ENSG00000144283 CDS Human protein_coding chr2:159488384 chr2:159488385 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5713 0 0 1 0 1 Cytosol 0.438715474953714 0.438713584450896 0 0 hPsi_site_11130 iPseU_CNN:0;iRNA_PseU:0 11131 chr14 96871147 96871147 1 + T G UCEC 96871146 + 96871126 96871166 41 GCTGGAGTGTGATGTTATTATTTATAACATCACTGAGAGCT GCTGGAGTGTGATGTTATTATGTATAACATCACTGAGAGCT < 41bp 0.821006956447024 0.494245566827643 0.23717767 0.231623 prediction 0.642013912894048 Functional Loss - AK7 ENSG00000140057 CDS Human protein_coding chr14:96871146 chr14:96871147 nonsynonymous SNV 0.370 2 22 hPsi_associated_SNPs_5714 0 0 0 0 2 nucleoplasm 0.438716289418374 0.43866542210357 0 0 hPsi_site_11131 iPseU_CNN:0;iRNA_PseU:0 11132 chr16 23581907 23581907 1 + T G COAD 23581906 + 23581886 23581926 41 TGCTGGGGAAATGGCAGTATTTTTGAAAGCACTTTCACCTC TGCTGGGGAAATGGCAGTATTGTTGAAAGCACTTTCACCTC < 41bp 0.820994399045514 0.496411602641456 0.36758733 0.26961446 prediction 0.641988798091028 Functional Loss - UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23581906 chr16:23581907 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5715 0 0 1 0 0 Ribosome 0.438718592147065 0.438718593149832 0 0 hPsi_site_11132 iPseU_CNN:0;iRNA_PseU:0 11133 chr8 33356104 33356104 1 + A G STAD 33356103 + 33356083 33356123 41 GAGCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCC GAGCCTATGTGGAAATAGAATGCGAGCAGGAGACAGAGCCC < 41bp 0.820984158266242 0.431627357359073 0.69990087 0.30637556 prediction 0.641968316532484 Functional Loss - MAK16 ENSG00000198042 CDS Human protein_coding chr8:33356103 chr8:33356104 nonsynonymous SNV 0.914 3 22 hPsi_associated_SNPs_5716 0 0 1 0 0 Cytosol 0.438718902678274 0.438750334735683 0.39980174 0 hPsi_site_11133 iPseU_CNN:0.39980174;iRNA_PseU:0 11134 chr1 114499313 114499313 1 + A G UCEC 114499312 + 114499292 114499332 41 AGAAGGCAGACCGAAGAGAATACATTGATCTGTTAAAGAAA AGAAGGCAGACCGAAGAGAATGCATTGATCTGTTAAAGAAA < 41bp 0.820981093212544 0.421459075780341 0.45245534 0.30449337 prediction 0.641962186425089 Functional Loss - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114499312 chr1:114499313 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5717 0 0 1 0 1 Cytosol 0.438735515853619 0.438719339663903 0 0 hPsi_site_11134 iPseU_CNN:0;iRNA_PseU:0 11135 chr11 55587511 55587511 1 + A G rs297081 55587510 + 55587490 55587530 41 AACCCTCTGCTCTACACAGTTAACATGTCCCAGAAACTCTG AACCCTCTGCTCTACACAGTTGACATGTCCCAGAAACTCTG < 41bp 0.892994855531059 0.572045133858858 0.48659706 0.33680645 prediction 0.641899443344403 Functional Loss - OR5D18 ENSG00000186119 CDS Human protein_coding chr11:55587510 chr11:55587511 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5718 0 0 0 0 0 unknown 0.438718102576133 0.438717904144553 0 0 hPsi_site_11135 iPseU_CNN:0;iRNA_PseU:0 11136 chrX 37026685 37026685 1 + A G UCEC 37026684 + 37026664 37026704 41 GGCTGTCAGTCTCCTGAAGATACGCTTGTTTGTCGCCGTGA GGCTGTCAGTCTCCTGAAGATGCGCTTGTTTGTCGCCGTGA < 41bp 0.889148911242356 0.568201416820929 0.7024624 0.31457427 prediction 0.641894988842854 Functional Loss - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37026684 chrX:37026685 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5719 0 0 0 0 0 unknown 0.439254523974723 0.438719038572751 0.4049248 0 hPsi_site_11136 iPseU_CNN:0.4049248;iRNA_PseU:0 11137 chr6 127469858 127469858 1 + T G STAD 127469857 + 127469837 127469877 41 TGCTCAGATTACAATGGATGTTTGTCATGTAAGCCCAGACT TGCTCAGATTACAATGGATGTGTGTCATGTAAGCCCAGACT < 41bp 0.820931066509531 0.497332299531201 0.60429335 0.5025925 prediction 0.641862133019063 Functional Loss - RSPO3 ENSG00000146374 CDS Human protein_coding chr6:127469857 chr6:127469858 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5720 0 0 0 0 1 exosome 0.438687389462032 0.438702334717781 0.2034017 0 hPsi_site_11137 iPseU_CNN:0.2034017;iRNA_PseU:0 11138 chr2 220350132 220350132 1 + A G PRAD 220350131 + 220350111 220350151 41 GCCGCGGAAGGACAAGGGGTTATCGCCACCAAACCTCTCTG GCCGCGGAAGGACAAGGGGTTGTCGCCACCAAACCTCTCTG < 41bp 0.896518994345446 0.575596863844395 0.7864351 0.61199635 prediction 0.641844261002101 Functional Loss - SPEG ENSG00000072195 CDS Human protein_coding chr2:220350131 chr2:220350132 synonymous SNV . 0 22 hPsi_associated_SNPs_5721 0 0 0 0 2 Nucleus 0.438881342484734 0.438647913600246 0.3488775 0 hPsi_site_11138 iPseU_CNN:0.3488775;iRNA_PseU:0 11139 chr12 99074148 99074148 1 + A G LUAD 99074147 + 99074127 99074167 41 TTCTCTACAGATGACAGATTTATAGCAACCTGCTCAGTGGA TTCTCTACAGATGACAGATTTGTAGCAACCTGCTCAGTGGA < 41bp 0.82091150486127 0.414658507353184 0.7623848 0.5198279 prediction 0.641823009722541 Functional Loss - APAF1 ENSG00000120868 CDS Human protein_coding chr12:99074147 chr12:99074148 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5722 0 0 0 0 2 Nucleus 0.438734999640452 0.438695287614352 0.4851138 0 hPsi_site_11139 iPseU_CNN:0.4851138;iRNA_PseU:0 11140 chr18 32889929 32889929 1 + A G UCEC 32889928 + 32889908 32889948 41 AGATAGCTTCAAAATTTAATTACAGGCACTTAGTGGGTGTC AGATAGCTTCAAAATTTAATTGCAGGCACTTAGTGGGTGTC < 41bp 0.833339492956504 0.512468800093901 0.23914954 0.18703339 prediction 0.641741385725207 Functional Loss - ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32889928 chr18:32889929 . . 0 22 hPsi_associated_SNPs_5723 0 0 1 0 0 unknown 0.437376721345302 0.438763497366608 0 0 hPsi_site_11140 iPseU_CNN:0;iRNA_PseU:0 11141 chr17 55183822 55183822 1 + A G COAD 55183821 + 55183801 55183841 41 AGAAATGAGGAGAGCTTGGATAGAAATGAGGAGGGCTTGGA AGAAATGAGGAGAGCTTGGATGGAAATGAGGAGGGCTTGGA < 41bp 0.820860582207344 0.400520871828733 0.25857604 0.18245775 prediction 0.641721164414688 Functional Loss - AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183821 chr17:55183822 nonsynonymous SNV 0.087 0 22 hPsi_associated_SNPs_5724 0 0 1 0 0 Endoplasmic reticulum 0.438718592995102 0.438718590233378 0 0 hPsi_site_11141 iPseU_CNN:0;iRNA_PseU:0 11142 chrX 57162490 57162490 1 + A C UCEC 57162489 + 57162469 57162509 41 TGCGGAGGTCACCTTCCTTATAATCATCTAGAAGCTGGTAC TGCGGAGGTCACCTTCCTTATCATCATCTAGAAGCTGGTAC < 41bp 0.820859861608376 0.482163340401722 0.5195155 0.2606169 prediction 0.641719723216752 Functional Loss - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162489 chrX:57162490 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_5725 0 0 0 0 0 exosome 0.43876812500965 0.438671140342746 0.039031 0 hPsi_site_11142 iPseU_CNN:0.039031;iRNA_PseU:0 11143 chr1 150484217 150484217 1 + A G COAD 150484216 + 150484196 150484236 41 CCTGCCAGCTACTGACCCCCTACAAAGGGAGCTGCTGGCAC CCTGCCAGCTACTGACCCCCTGCAAAGGGAGCTGCTGGCAC < 41bp 0.820769122111916 0.409500569775174 0.3139649 0.29964778 prediction 0.641538244223831 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484216 chr1:150484217 synonymous SNV . 0 22 hPsi_associated_SNPs_5726 0 0 1 0 1 Endoplasmic reticulum 0.438593024120856 0.438017950946139 0 0 hPsi_site_11143 iPseU_CNN:0;iRNA_PseU:0 11144 chr16 84224941 84224941 1 + A G STAD 84224940 + 84224920 84224960 41 GCCCCGCCCCTGGCGACCGCTACCCGCCCAGGCCCAAAGTG GCCCCGCCCCTGGCGACCGCTGCCCGCCCAGGCCCAAAGTG < 41bp 0.892218249890332 0.571449970851732 0.84323645 0.20215279 prediction 0.6415365580772 Functional Loss - ADAD2 ENSG00000140955 CDS Human protein_coding chr16:84224940 chr16:84224941 synonymous SNV . 0 22 hPsi_associated_SNPs_5727 0 0 0 0 0 exosome 0.438717567244499 0.438719016129846 0.6864729 0 hPsi_site_11144 iPseU_CNN:0.6864729;iRNA_PseU:0 11145 chr12 112193499 112193499 1 + A C STAD 112193498 + 112193478 112193518 41 GCCTTGGATATAGCCATGATTAAAATGGTCGCCCCGTCCAT GCCTTGGATATAGCCATGATTCAAATGGTCGCCCCGTCCAT < 41bp 0.820746481680454 0.454651207011363 0.4586229 0.45957223 prediction 0.641492963360908 Functional Loss - ACAD10 ENSG00000111271;ENSG00000257767 CDS Human other chr12:112193498 chr12:112193499 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_5728 0 0 0 0 2 Endoplasmic reticulum 0.438718593408793 0.438718679111278 0 0 hPsi_site_11145 iPseU_CNN:0;iRNA_PseU:0 11146 chr2 27598410 27598410 1 + A G UCEC 27598409 + 27598389 27598429 41 AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGT AGACGCTGCGGCACTATGGCTGCTTGCGCTTTGATGCCTGT < 41bp 0.900613287205087 0.579871442140546 0.6794313 0.2652277 prediction 0.641483690129081 Functional Loss - SNX17 ENSG00000115234 CDS Human protein_coding chr2:27598409 chr2:27598410 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_5729 0 0 1 0 1 Ribosome 0.419197973465281 0.428266113452975 0.3588626 0 hPsi_site_11146 iPseU_CNN:0.3588626;iRNA_PseU:0 11147 chr9 32784834 32784834 1 + A G UCS 32784833 + 32784813 32784853 41 AGAACAGCCCGTATGACAGATACTGTTGTTATATCAATCAG AGAACAGCCCGTATGACAGATGCTGTTGTTATATCAATCAG < 41bp 0.820741382327568 0.431821640449455 0.2570091 0.22184917 prediction 0.641482764655137 Functional Loss - TMEM215 ENSG00000188133 CDS Human protein_coding chr9:32784833 chr9:32784834 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5730 0 0 0 0 0 exosome 0.438303041620756 0.438534666803458 0 0 hPsi_site_11147 iPseU_CNN:0;iRNA_PseU:0 11148 chr10 99474837 99474837 1 + A G rs558090760 99474836 + 99474816 99474856 41 TAGGAGAAGCCGGTGGGTTGTACCCTTACACTTGTGGAGTC TAGGAGAAGCCGGTGGGTTGTGCCCTTACACTTGTGGAGTC < 41bp 0.820723575670518 0.419600046126168 0.52693033 0.2069329 prediction 0.641447151341037 Functional Loss - MARVELD1 ENSG00000155254 UTR3 Human protein_coding chr10:99474836 chr10:99474837 . . 0 22 hPsi_associated_SNPs_5731 0 0 1 2 0 Ribosome 0.438718592994982 0.438718592995102 0.05386066 0 hPsi_site_11148 iPseU_CNN:0.05386066;iRNA_PseU:0 11149 chr11 67190910 67190910 1 + T G OV 67190909 + 67190889 67190929 41 TGGTACAGACCTTCATCCACTTTGACATGACAGAGCACCGG TGGTACAGACCTTCATCCACTGTGACATGACAGAGCACCGG < 41bp 0.820720545205148 0.49170347111451 0.27508217 0.22266144 prediction 0.641441090410296 Functional Loss - CARNS1 ENSG00000172508 CDS Human protein_coding chr11:67190909 chr11:67190910 nonsynonymous SNV 0.971 3 22 hPsi_associated_SNPs_5732 0 0 0 0 1 exosome 0.438718592910916 0.438719976697408 0 0 hPsi_site_11149 iPseU_CNN:0;iRNA_PseU:0 11150 chr5 140572475 140572475 1 + A C rs143882112 140572474 + 140572454 140572494 41 TGGATGATCCCTTTCAGATTTACCGGGCTGAGCTGAGAGTC TGGATGATCCCTTTCAGATTTCCCGGGCTGAGCTGAGAGTC < 41bp 0.857093559014949 0.536402824066301 0.3781728 0.22172412 prediction 0.641381469897296 Functional Loss - PCDHB10 ENSG00000120324 CDS Human protein_coding chr5:140572474 chr5:140572475 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5733 0 0 0 0 0 exosome 0.438718619367588 0.438714522299804 0 0 hPsi_site_11150 iPseU_CNN:0;iRNA_PseU:0 11151 chr15 41594881 41594881 1 + A G rs193083552 41594880 + 41594860 41594900 41 AGCTGTTGAAATTAAACCTTTATAGTGCTTAACCTGGAAAC AGCTGTTGAAATTAAACCTTTGTAGTGCTTAACCTGGAAAC < 41bp 0.881609689548394 0.560930054837425 0.47730696 0.57276154 prediction 0.641359269421939 Functional Loss - OIP5-AS1;OIP5 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41594880 chr15:41594881 . . 0 22 hPsi_associated_SNPs_5734 0 0 1 0 0 unknown 0.438718535900075 0.438715494753682 0 0 hPsi_site_11151 iPseU_CNN:0;iRNA_PseU:0 11152 chr2 113763592 113763592 1 + A G LIHC 113763591 + 113763571 113763611 41 CAGCAGGGGAGCATTCAGGATATCAATCATCGGGTGTGGGT CAGCAGGGGAGCATTCAGGATGTCAATCATCGGGTGTGGGT < 41bp 0.820674922752989 0.408925281431709 0.6039459 0.34235904 prediction 0.641349845505978 Functional Loss - IL36A ENSG00000136694 CDS Human protein_coding chr2:113763591 chr2:113763592 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5735 0 0 0 0 2 exosome 0.439017641720611 0.438412567231198 0.2078918 0 hPsi_site_11152 iPseU_CNN:0.2078918;iRNA_PseU:0 Mosaic variegated aneuploidy syndrome 2 Mosaic variegated aneuploidy syndrome 2 11153 chr9 35792674 35792674 1 + A G GBM 35792673 + 35792653 35792693 41 GCGCTGTGGACCTCAAGCTGTACCATGACCCCGACCTGCTG GCGCTGTGGACCTCAAGCTGTGCCATGACCCCGACCTGCTG < 41bp 0.90731209823846 0.586664828777341 0.84552777 0.35192245 prediction 0.641294538922237 Functional Loss - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792673 chr9:35792674 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5736 0 0 0 0 0 chromatin 0.438701448876554 0.438717882848886 0.69105554 0 hPsi_site_11153 iPseU_CNN:0.69105554;iRNA_PseU:0 11154 chr9 111625276 111625276 1 + A G LIHC 111625275 + 111625255 111625295 41 AGGTGGGCCATGGCGTGTCCTACGTGGTCCCCATCTACGAG AGGTGGGCCATGGCGTGTCCTGCGTGGTCCCCATCTACGAG < 41bp 0.820644898778342 0.408188419398036 0.40554464 0.2090247 prediction 0.641289797556685 Functional Loss - ACTL7A ENSG00000187003 CDS Human protein_coding chr9:111625275 chr9:111625276 nonsynonymous SNV 0.954 2 22 hPsi_associated_SNPs_5737 0 0 0 0 0 unknown 0.438712795446442 0.438717162614997 0 0 hPsi_site_11154 iPseU_CNN:0;iRNA_PseU:0 11155 chr17 7329903 7329903 1 + A G COAD 7329902 + 7329882 7329922 41 TGCCCTTCCCGTATCCCAAGTACCCACGTCGCGGCTGGGGC TGCCCTTCCCGTATCCCAAGTGCCCACGTCGCGGCTGGGGC < 41bp 0.820639707670565 0.405028279012245 0.40149754 0.24384508 prediction 0.641279415341129 Functional Loss - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329902 chr17:7329903 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_5738 0 0 0 0 0 exosome 0.439027378765004 0.438929971149404 0 0 hPsi_site_11155 iPseU_CNN:0;iRNA_PseU:0 Short Rib Polydactyly Syndrome Short Rib Polydactyly Syndrome 11156 chr10 25465198 25465198 1 + T C rs188462125 25465199 - 25465179 25465219 41 GTAGATGGCAGAGGAAAGAGTAACCAGCCACCCGGGCTTGT GTAGATGGCAGAGGAAAGAGTGACCAGCCACCCGGGCTTGT < 41bp 0.891657477367896 0.571018825753514 0.64407307 0.38409665 prediction 0.641277303228762 Functional Loss - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25465199 chr10:25465198 synonymous SNV . 0 22 hPsi_associated_SNPs_5739 0 0 0 0 0 Endoplasmic reticulum 0.438718593012572 0.438718245046232 0.28814614 0 hPsi_site_11156 iPseU_CNN:0.28814614;iRNA_PseU:0 11157 chr3 143704485 143704485 1 + T G SKCM 143704484 + 143704464 143704504 41 GAGAAGAACTGTGGAGTTACTTTAATGCGCCATGGGAAAAA GAGAAGAACTGTGGAGTTACTGTAATGCGCCATGGGAAAAA < 41bp 0.845622857478445 0.524998314088644 0.6929096 0.53569 prediction 0.641249086779603 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143704484 chr3:143704485 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5740 0 0 1 0 0 Ribosome 0.438718587392015 0.438718594950395 0.3144392 0 hPsi_site_11157 iPseU_CNN:0.3144392;iRNA_PseU:0 Jeune thoracic dystrophy Jeune thoracic dystrophy 11158 chr1 111999344 111999344 1 + T G PAAD 111999343 + 111999323 111999363 41 GAAGTCACAACAGGCACTGGTTCAGAAGCGCCATTACCTTT GAAGTCACAACAGGCACTGGTGCAGAAGCGCCATTACCTTT < 41bp 0.841540621305662 0.520920299985618 0.5896134 0.480498 prediction 0.641240642640089 Functional Loss - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:111999343 chr1:111999344 synonymous SNV . 0 22 hPsi_associated_SNPs_5741 0 0 1 0 1 Ribosome 0.438719017458051 0.438718264838089 0.1792268 0 hPsi_site_11158 iPseU_CNN:0.1792268;iRNA_PseU:0 11159 chr19 59061584 59061584 1 + A G STAD 59061583 + 59061563 59061603 41 AGGAGAAGTTGTCACCTCCCTACAGCTCCCCACAGGAGTTT AGGAGAAGTTGTCACCTCCCTGCAGCTCCCCACAGGAGTTT < 41bp 0.891429890584107 0.570827965151177 0.8095234 0.46259955 prediction 0.64120385086586 Functional Loss - TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59061583 chr19:59061584 nonsynonymous SNV 0.501 4 22 hPsi_associated_SNPs_5742 0 0 1 0 2 Cytosol 0.438718593154576 0.438718592968443 0.6190468 0 hPsi_site_11159 iPseU_CNN:0.6190468;iRNA_PseU:0 11160 chr10 70775967 70775967 1 + A C BLCA 70775966 + 70775946 70775986 41 AGTTTCGAGTTGCCCGTCTCTATGGCAAAATCATTACTGCA AGTTTCGAGTTGCCCGTCTCTCTGGCAAAATCATTACTGCA < 41bp 0.820588067184638 0.454401019057496 0.3717627 0.27962077 prediction 0.641176134369277 Functional Loss - KIF1BP ENSG00000198954 CDS Human protein_coding chr10:70775966 chr10:70775967 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5743 0 0 1 0 0 chromatin 0.438718757007204 0.438770484596682 0 0 hPsi_site_11160 iPseU_CNN:0;iRNA_PseU:0 11161 chr11 126146291 126146291 1 + A G rs544726923 126146290 + 126146270 126146310 41 ACCGCACTGGTTGTGGCAGGTATGTGTATGTGTGGCACTGC ACCGCACTGGTTGTGGCAGGTGTGTGTATGTGTGGCACTGC < 41bp 0.820574832902286 0.403965740548688 0.74011624 0.22535312 prediction 0.641149665804573 Functional Loss - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126146290 chr11:126146291 nonsynonymous SNV 0.846 5 22 hPsi_associated_SNPs_5744 0 0 1 0 1 Ribosome 0.438501535928836 0.438694816269403 0.48023248 0 hPsi_site_11161 iPseU_CNN:0.48023248;iRNA_PseU:0 11162 chr22 32756576 32756576 1 + A C rs199572344 32756575 + 32756555 32756595 41 GGTGCCGCTGACTTTCCTCTTAGTAGACCGCAAGTTACAGC GGTGCCGCTGACTTTCCTCTTCGTAGACCGCAAGTTACAGC < 41bp 0.82057304025392 0.450616405549895 0.33201072 0.2085323 prediction 0.64114608050784 Functional Loss - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32756575 chr22:32756576 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5745 0 0 0 0 0 exosome 0.434133029434071 0.43867836170318 0 0 hPsi_site_11162 iPseU_CNN:0;iRNA_PseU:0 11163 chr3 136574420 136574420 1 + A G rs140456008 136574419 + 136574399 136574439 41 TGCACATATTTCCTAGCATCTATGATGTTTTTGGAGGGGTA TGCACATATTTCCTAGCATCTGTGATGTTTTTGGAGGGGTA < 41bp 0.820553486178639 0.421721343245566 0.4022468 0.2825325 prediction 0.641106972357277 Functional Loss - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136574419 chr3:136574420 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_5746 0 0 1 0 0 nucleolus 0.438711089783645 0.438691727552031 0 0 hPsi_site_11163 iPseU_CNN:0;iRNA_PseU:0 11164 chr5 140866246 140866246 1 + A G LUAD 140866245 + 140866225 140866265 41 GGAGCCCAGGAATCGAGATGTATCAGCTTCCTCTTTCATCT GGAGCCCAGGAATCGAGATGTGTCAGCTTCCTCTTTCATCT < 41bp 0.820547368614771 0.422086844173061 0.33206475 0.262996 prediction 0.641094737229542 Functional Loss - PCDHGC4 ENSG00000242419 CDS Human protein_coding chr5:140866245 chr5:140866246 synonymous SNV . 0 22 hPsi_associated_SNPs_5747 0 0 0 0 0 exosome 0.438718592994476 0.438718587147803 0 0 hPsi_site_11164 iPseU_CNN:0;iRNA_PseU:0 11165 chr11 125503141 125503141 1 + A G UCEC 125503140 + 125503120 125503160 41 TTGTTGAACAAGATGTGTGGTACTTTACCATATGTTGCTCC TTGTTGAACAAGATGTGTGGTGCTTTACCATATGTTGCTCC < 41bp 0.820540890428651 0.402101442321401 0.60981935 0.27587366 prediction 0.641081780857301 Functional Loss - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125503140 chr11:125503141 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5748 0 0 1 0 1 Ribosome 0.439628358650431 0.438031062940902 0.2196387 0 hPsi_site_11165 iPseU_CNN:0.2196387;iRNA_PseU:0 11166 chr12 52312784 52312784 1 + A G BLCA 52312783 + 52312763 52312803 41 TTCCAGGCATCGTGGAGGACTATAGACCACCCTTCTATGAT TTCCAGGCATCGTGGAGGACTGTAGACCACCCTTCTATGAT < 41bp 0.820531781815668 0.398336082166767 0.5818467 0.40031812 prediction 0.641063563631336 Functional Loss - ACVRL1 ENSG00000139567 CDS Human protein_coding chr12:52312783 chr12:52312784 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5749 0 0 0 0 1 Endoplasmic reticulum 0.438718601629104 0.438708249951411 0.1636934 0 hPsi_site_11166 iPseU_CNN:0.1636934;iRNA_PseU:0 11167 chr2 70504451 70504451 1 + A G STAD 70504450 + 70504430 70504470 41 ACAACGCTGCACTCCTTGCCTATCACCGCTGGAACGGGCAC ACAACGCTGCACTCCTTGCCTGTCACCGCTGGAACGGGCAC < 41bp 0.896030002477621 0.575507337496359 0.4940649 0.21467805 prediction 0.641045329962524 Functional Loss - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70504450 chr2:70504451 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_5750 0 0 1 0 0 Ribosome 0.43872891330133 0.438863975079399 0 0 hPsi_site_11167 iPseU_CNN:0;iRNA_PseU:0 11168 chr1 168211883 168211883 1 + A G rs74121080 168211882 + 168211862 168211902 41 TCTTACAGACATGTGCCTTTTATCTTGCAGCAATGTGTTGC TCTTACAGACATGTGCCTTTTGTCTTGCAGCAATGTGTTGC < 41bp 0.820508230073037 0.447713917614414 0.3452837 0.24093223 prediction 0.641016460146074 Functional Loss - SFT2D2 ENSG00000213064 UTR3 Human protein_coding chr1:168211882 chr1:168211883 . . 0 22 hPsi_associated_SNPs_5751 0 0 1 1 0 Ribosome 0.43593670207001 0.435042541924048 0 0 hPsi_site_11168 iPseU_CNN:0;iRNA_PseU:0 11169 chr20 35869816 35869816 1 + A G rs149922061 35869815 + 35869795 35869835 41 AAAATGGAAAAAAAAAACTTTATTTAAAAAAGAAAAAAGTC AAAATGGAAAAAAAAAACTTTGTTTAAAAAAGAAAAAAGTC < 41bp 0.82050011189146 0.442779082363312 0.2828108 0.27106714 prediction 0.64100022378292 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35869815 chr20:35869816 unknown . 0 22 hPsi_associated_SNPs_5752 0 0 1 1 0 Ribosome 0.439225669413413 0.440060575643789 0 0 hPsi_site_11169 iPseU_CNN:0;iRNA_PseU:0 11170 chr16 1818260 1818260 1 + A G STAD 1818259 + 1818239 1818279 41 CCGGGGGCATCATCCACGTGTATGGCGATGACAGCAGTGAC CCGGGGGCATCATCCACGTGTGTGGCGATGACAGCAGTGAC < 41bp 0.820461205547789 0.400031904142151 0.2760135 0.29250795 prediction 0.640922411095578 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1818259 chr16:1818260 nonsynonymous SNV 0.295 4 22 hPsi_associated_SNPs_5753 0 0 0 0 1 chromatin 0.438722459992665 0.438682729574723 0 0 hPsi_site_11170 iPseU_CNN:0;iRNA_PseU:0 11171 chr7 57528432 57528432 1 + A G UCEC 57528431 + 57528411 57528451 41 TGATTTTTATGTCTTTCAGTTACATGTTCTCATTTCACCCA TGATTTTTATGTCTTTCAGTTGCATGTTCTCATTTCACCCA < 41bp 0.820454180611133 0.44093189139633 0.6616083 0.32535517 prediction 0.640908361222267 Functional Loss - ZNF716 ENSG00000182111 CDS Human protein_coding chr7:57528431 chr7:57528432 nonsynonymous SNV 0.042 1 22 hPsi_associated_SNPs_5754 0 0 0 0 1 unknown 0.438526970723322 0.441575774991929 0.3232166 0 hPsi_site_11171 iPseU_CNN:0.3232166;iRNA_PseU:0 11172 chr14 60581906 60581906 1 + A G rs75475362 60581905 + 60581885 60581925 41 GAATGCCTTTTCTACATCATTATATTAGTCTTGGCTCTTTT GAATGCCTTTTCTACATCATTGTATTAGTCTTGGCTCTTTT < 41bp 0.898295226567598 0.577846209181264 0.636409 0.4756094 prediction 0.640898034772668 Functional Loss - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60581905 chr14:60581906 nonsynonymous SNV 0.066 0 22 hPsi_associated_SNPs_5755 0 0 1 0 0 Endoplasmic reticulum 0.438125602264268 0.438519332896255 0.272818 0 hPsi_site_11172 iPseU_CNN:0.272818;iRNA_PseU:0 11173 chr17 77079854 77079854 1 + A G rs61729127 77079853 + 77079833 77079873 41 TTTTCTTCAGGAAGAGGCGGTAGGGCCCTGGTACCACCTGA TTTTCTTCAGGAAGAGGCGGTGGGGCCCTGGTACCACCTGA < 41bp 0.820437111296274 0.400115057523259 0.50968486 0.26946273 prediction 0.640874222592548 Functional Loss - ENGASE ENSG00000167280 CDS Human protein_coding chr17:77079853 chr17:77079854 synonymous SNV . 0 22 hPsi_associated_SNPs_5756 0 0 1 0 1 chromatin 0.438718592995295 0.438718592994152 0.01936972 0 hPsi_site_11173 iPseU_CNN:0.01936972;iRNA_PseU:0 11174 chr3 52818369 52818369 1 + T G SKCM 52818368 + 52818348 52818388 41 GCAACGCCATCCGGGGCAGGTTCCCGCTCTACAACCTGGGT GCAACGCCATCCGGGGCAGGTGCCCGCTCTACAACCTGGGT < 41bp 0.834833747236093 0.514416205551911 0.27324116 0.14496219 prediction 0.640835083368365 Functional Loss - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52818368 chr3:52818369 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5757 0 0 0 0 1 Endoplasmic reticulum 0.438718593039975 0.438718609142401 0 0 hPsi_site_11174 iPseU_CNN:0;iRNA_PseU:0 11175 chr10 38736838 38736838 1 + A G rs569169685 38736837 + 38736817 38736857 41 CAATGGCCTATTTAGGCCCATACCCTACCTCACGGCAGTCT CAATGGCCTATTTAGGCCCATGCCCTACCTCACGGCAGTCT < 41bp 0.820406052069419 0.43617661934781 0.6892915 0.25327116 prediction 0.640812104138838 Functional Loss - LINC00999 ENSG00000225119 downstream Human other chr10:38736837 chr10:38736838 . . 0 22 hPsi_associated_SNPs_5758 0 0 0 0 1 nucleoplasm 0.438718592526756 0.438718599122815 0.378583 0 hPsi_site_11175 iPseU_CNN:0.378583;iRNA_PseU:0 11176 chr8 22368626 22368626 1 + A G STAD 22368625 + 22368605 22368645 41 TCAAATATTCGGAACAGGTGTATGATGCCTGTATGGAGACA TCAAATATTCGGAACAGGTGTGTGATGCCTGTATGGAGACA < 41bp 0.820384883575659 0.399582120526625 0.38073662 0.2806083 prediction 0.640769767151317 Functional Loss - PPP3CC ENSG00000120910 CDS Human protein_coding chr8:22368625 chr8:22368626 nonsynonymous SNV 0.881 4 22 hPsi_associated_SNPs_5759 0 0 0 0 1 Cytosol 0.439056181719741 0.439541053785547 0 0 hPsi_site_11176 iPseU_CNN:0;iRNA_PseU:0 11177 chr3 98251333 98251333 1 + A G UCEC 98251332 + 98251312 98251352 41 AAGGACAGACTGTGCATATGTAGTCTGTGCCAGCATCTGGT AAGGACAGACTGTGCATATGTGGTCTGTGCCAGCATCTGGT < 41bp 0.820373191439789 0.409881956220854 0.4569986 0.2757241 prediction 0.640746382879579 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251332 chr3:98251333 synonymous SNV . 0 22 hPsi_associated_SNPs_5760 0 0 0 0 0 exosome 0.438742113551569 0.438430457841938 0 0 hPsi_site_11177 iPseU_CNN:0;iRNA_PseU:0 11178 chr15 40866599 40866599 1 + A G rs187002365 40866598 + 40866578 40866618 41 AGAGACCTGCTCATACTTGCTACCTCCTTCCAGTGGGAATT AGAGACCTGCTCATACTTGCTGCCTCCTTCCAGTGGGAATT < 41bp 0.820358580679695 0.477344570219022 0.26852298 0.1766763 prediction 0.64071716135939 Functional Loss - RPUSD2 ENSG00000166133 UTR3 Human protein_coding chr15:40866598 chr15:40866599 . . 0 22 hPsi_associated_SNPs_5761 0 0 1 9 0 Cytosol 0.438715974473262 0.43871804919748 0 0 hPsi_site_11178 iPseU_CNN:0;iRNA_PseU:0 11179 chrX 70362053 70362053 1 + A G COAD 70362052 + 70362032 70362072 41 GCCACAGCCCAGTACCAACATATTTGGACGCTACTGAGCCA GCCACAGCCCAGTACCAACATGTTTGGACGCTACTGAGCCA < 41bp 0.820338031601403 0.425158649626072 0.33668405 0.31121486 prediction 0.640676063202806 Functional Loss - MED12 ENSG00000184634 CDS Human protein_coding chrX:70362052 chrX:70362053 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5762 0 0 1 0 1 Cytosol 0.438720579192835 0.43871569820617 0 0 hPsi_site_11179 iPseU_CNN:0;iRNA_PseU:0 11180 chrX 77369244 77369244 1 + T G OV 77369243 + 77369223 77369263 41 GTCTCTCTTTGGTTGCAGGATTAAGGCTGCTGTCCCAAGCA GTCTCTCTTTGGTTGCAGGATGAAGGCTGCTGTCCCAAGCA < 41bp 0.820330580902245 0.499733163173735 0.81505346 0.30867046 prediction 0.640661161804489 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77369243 chrX:77369244 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5763 0 0 1 0 1 Ribosome 0.43867410774926 0.439333660589715 0.63010692 0 hPsi_site_11180 iPseU_CNN:0.63010692;iRNA_PseU:0 11181 chr15 32971993 32971993 1 + T G UCEC 32971992 + 32971972 32972012 41 GCTCATGAAGGACTTCAGCATTTGGGTCCTTTTGGCAACAT GCTCATGAAGGACTTCAGCATGTGGGTCCTTTTGGCAACAT < 41bp 0.843966224272335 0.523665526409636 0.5376146 0.3261519 prediction 0.640601395725399 Functional Loss - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32971992 chr15:32971993 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_5764 0 0 0 0 1 cytosol 0.43872533169755 0.43868875262018 0.0752292000000001 0 hPsi_site_11181 iPseU_CNN:0.0752292000000001;iRNA_PseU:0 LDL cholesterol 11182 chr5 67593317 67593317 1 + A G STAD 67593316 + 67593296 67593336 41 TTGCCGAGCCCTATAACTTGTACAGCTCTCTGAAAGAACTG TTGCCGAGCCCTATAACTTGTGCAGCTCTCTGAAAGAACTG < 41bp 0.820293966640084 0.421463066862276 0.5562656 0.3172755 prediction 0.640587933280169 Functional Loss - PIK3R1 ENSG00000145675 CDS Human protein_coding chr5:67593316 chr5:67593317 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5765 0 0 1 0 0 Nucleus 0.438718165877322 0.438718606071625 0.1125312 0 hPsi_site_11182 iPseU_CNN:0.1125312;iRNA_PseU:0 11183 chr11 82625843 82625843 1 + A G COAD 82625842 + 82625822 82625862 41 TCTCCAGAATTCAAGTTTTATATATCCATCATGTCAGAAGT TCTCCAGAATTCAAGTTTTATGTATCCATCATGTCAGAAGT < 41bp 0.820281195344503 0.420619673158702 0.21508467 0.20644432 prediction 0.640562390689006 Functional Loss - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82625842 chr11:82625843 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5766 0 0 1 0 2 nucleus 0.439043372430163 0.437415124621516 0 0 hPsi_site_11183 iPseU_CNN:0;iRNA_PseU:0 Hereditary sensory and autonomic neuropathy type II Hereditary sensory and autonomic neuropathy type II 11184 chr12 13208670 13208670 1 + T G GBM 13208669 + 13208649 13208689 41 GAGGCTGCAAAGCCACATCTTTCAGAAGTCACCACGGAGGG GAGGCTGCAAAGCCACATCTTGCAGAAGTCACCACGGAGGG < 41bp 0.84692102747618 0.526643250340261 0.6411191 0.26425976 prediction 0.640555554271838 Functional Loss - FAM234B ENSG00000084444 CDS Human protein_coding chr12:13208669 chr12:13208670 nonsynonymous SNV 0.382 0 22 hPsi_associated_SNPs_5767 0 0 0 0 0 Nucleus 0.438718593009941 0.438720803016549 0.2822382 0 hPsi_site_11184 iPseU_CNN:0.2822382;iRNA_PseU:0 Hereditary sensory and autonomic neuropathy type II Hereditary sensory and autonomic neuropathy type II 11185 chr22 39123256 39123256 1 + T G SKCM 39123255 + 39123235 39123275 41 CCGGAAGGGCATGGTGATGGTTTCCCCACGTTTGAATCCCC CCGGAAGGGCATGGTGATGGTGTCCCCACGTTTGAATCCCC < 41bp 0.820254796180833 0.480711605786749 0.32054222 0.26658386 prediction 0.640509592361666 Functional Loss - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39123255 chr22:39123256 synonymous SNV . 0 22 hPsi_associated_SNPs_5768 0 0 1 0 2 Ribosome 0.438719264864229 0.438721613706602 0 0 hPsi_site_11185 iPseU_CNN:0;iRNA_PseU:0 11186 chr22 19754791 19754791 1 + A G rs72646971 19754790 + 19754770 19754810 41 GCAGGCGGTGTAGATACATGTAGATACTGTAGATACTGTAG GCAGGCGGTGTAGATACATGTGGATACTGTAGATACTGTAG < 41bp 0.820240713057559 0.490427816942787 0.22041357 0.16580582 prediction 0.640481426115118 Functional Loss - TBX1 ENSG00000184058 UTR3 Human protein_coding chr22:19754790 chr22:19754791 . . 0 22 hPsi_associated_SNPs_5769 0 0 1 5 0 chromatin 0.43871859085011 0.438718495719307 0 0 hPsi_site_11186 iPseU_CNN:0;iRNA_PseU:0 11187 chr10 111767960 111767960 1 + T C rs577071118 111767961 - 111767941 111767981 41 CCGCCGCTGCGGCCGCCTCTTAAGCGCCGCAGAGCCCCAGA CCGCCGCTGCGGCCGCCTCTTGAGCGCCGCAGAGCCCCAGA < 41bp 0.820240474290506 0.461532585964503 0.49295643 0.16406083 prediction 0.640480948581012 Functional Loss - ADD3-AS1 ENSG00000148700 UTR5 Human protein_coding chr10:111767961 chr10:111767960 . . 0 22 hPsi_associated_SNPs_5770 0 0 0 0 0 unknown 0.438219220588635 0.438713363420696 0 0 hPsi_site_11187 iPseU_CNN:0;iRNA_PseU:0 11188 chrX 114426349 114426349 1 + A G UCEC 114426348 + 114426328 114426368 41 GAGGAGGCCGCTACGAGGAGTACCGAGGCCGCTCGCTCGAT GAGGAGGCCGCTACGAGGAGTGCCGAGGCCGCTCGCTCGAT < 41bp 0.820236574221036 0.42545004051848 0.87118995 0.530999 prediction 0.640473148442073 Functional Loss - RBMXL3 ENSG00000175718 CDS Human protein_coding chrX:114426348 chrX:114426349 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_5771 0 0 0 0 0 exosome 0.438650039534857 0.438714944378579 0.6803819 0 hPsi_site_11188 iPseU_CNN:0.6803819;iRNA_PseU:0 11189 chr17 1421182 1421182 1 + A G rs77026090 1421181 + 1421161 1421201 41 AATTTTCAGACACACCTTTGTACCTCTTCCTAATCCTGCCC AATTTTCAGACACACCTTTGTGCCTCTTCCTAATCCTGCCC < 41bp 0.820227083651649 0.443513015152499 0.40997273 0.22788972 prediction 0.640454167303297 Functional Loss - PITPNA-AS1 ENSG00000236618 ncRNA_exonic Human antisense chr17:1421181 chr17:1421182 . . 0 22 hPsi_associated_SNPs_5772 0 0 1 0 0 unknown 0.4387165041555 0.438686384139478 0 0 hPsi_site_11189 iPseU_CNN:0;iRNA_PseU:0 11190 chr11 5776694 5776694 1 + A G STAD 5776693 + 5776673 5776713 41 GCTCGGCAGAAGGCCTTTAATACCTGCACTGCCCACATTTG GCTCGGCAGAAGGCCTTTAATGCCTGCACTGCCCACATTTG < 41bp 0.820215710217502 0.421997926883397 0.31051528 0.18799144 prediction 0.640431420435004 Functional Loss - OR52N4 ENSG00000181074 CDS Human protein_coding chr11:5776693 chr11:5776694 nonsynonymous SNV 0.387 4 22 hPsi_associated_SNPs_5773 0 0 0 0 0 exosome 0.43871836193305 0.438717481550792 0 0 hPsi_site_11190 iPseU_CNN:0;iRNA_PseU:0 11191 chr9 90345956 90345956 1 + A G rs142361476 90345955 + 90345935 90345975 41 ATGGGGCATGGGTGGCTACGTAAAGATGGCCAAAGACCGGA ATGGGGCATGGGTGGCTACGTGAAGATGGCCAAAGACCGGA < 41bp 0.895921957464912 0.575711019646358 0.24348623 0.12274197 prediction 0.640421875637107 Functional Loss - CTSL ENSG00000135047 CDS Human protein_coding chr9:90345955 chr9:90345956 synonymous SNV . 0 22 hPsi_associated_SNPs_5774 0 0 1 0 1 Ribosome 0.438718604574975 0.438718668541619 0 0 hPsi_site_11191 iPseU_CNN:0;iRNA_PseU:0 11192 chr4 515548 515548 1 + T G COAD 515547 + 515527 515567 41 GGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTC GGGTTTTCTCTGCTCTTTTATGTGGTGATCCTGGTTCTTTC < 41bp 0.820201856333635 0.489010572548297 0.33874953 0.3871181 prediction 0.64040371266727 Functional Loss - PIGG ENSG00000174227 CDS Human protein_coding chr4:515547 chr4:515548 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_5775 0 0 1 0 1 Nucleus 0.438718592974888 0.438718596202459 0 0 hPsi_site_11192 iPseU_CNN:0;iRNA_PseU:0 11193 chr19 45157274 45157274 1 + A G rs149450931 45157273 + 45157253 45157293 41 GCAACCCAGAGCCCACAGGCTATAATTGGAGCACGTGAGTC GCAACCCAGAGCCCACAGGCTGTAATTGGAGCACGTGAGTC < 41bp 0.820194473890057 0.396810874013922 0.32360405 0.25160345 prediction 0.640388947780114 Functional Loss - PVR ENSG00000073008 CDS Human protein_coding chr19:45157273 chr19:45157274 nonsynonymous SNV 0.723 3 22 hPsi_associated_SNPs_5776 0 0 0 0 1 Ribosome 0.438718162078874 0.438719244121286 0 0 hPsi_site_11193 iPseU_CNN:0;iRNA_PseU:0 11194 chr12 56398798 56398798 1 + A G LUAD 56398797 + 56398777 56398817 41 CCTGGCATCGTGTCCATGTCTATGTCTCCCCATGAGCATGG CCTGGCATCGTGTCCATGTCTGTGTCTCCCCATGAGCATGG < 41bp 0.820192585354375 0.413808096752348 0.2859944 0.23139465 prediction 0.64038517070875 Functional Loss - SUOX ENSG00000139531 CDS Human protein_coding chr12:56398797 chr12:56398798 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_5777 0 0 0 0 0 Cytosol 0.434644426083227 0.437145000621022 0 0 hPsi_site_11194 iPseU_CNN:0;iRNA_PseU:0 11195 chr7 2402393 2402393 1 + T G UCEC 2402392 + 2402372 2402412 41 GGGTCAACCTCTTTACGGATTTTGACAAGTGAGTTCAGACT GGGTCAACCTCTTTACGGATTGTGACAAGTGAGTTCAGACT < 41bp 0.825747284350248 0.505562627063191 0.46737778 0.31714568 prediction 0.640369314574115 Functional Loss - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2402392 chr7:2402393 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_5778 0 0 1 0 1 Ribosome 0.440371314295754 0.438719985113373 0 0 hPsi_site_11195 iPseU_CNN:0;iRNA_PseU:0 11196 chr8 20078382 20078382 1 + A G rs149082487 20078381 + 20078361 20078401 41 GTTTGCTTTCGGTTTGTTGGTATGCCTGTATTGCTGGGCTG GTTTGCTTTCGGTTTGTTGGTGTGCCTGTATTGCTGGGCTG < 41bp 0.88542998611812 0.565246355693214 0.29367447 0.17781165 prediction 0.640367260849811 Functional Loss - ATP6V1B2 ENSG00000147416 UTR3 Human protein_coding chr8:20078381 chr8:20078382 . . 0 22 hPsi_associated_SNPs_5779 0 0 1 0 0 Ribosome 0.438723233782718 0.438923821124715 0 0 hPsi_site_11196 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 11197 chr6 134305530 134305530 1 + T G COAD 134305529 + 134305509 134305549 41 TAAAGGTAATATTTACAGATTTTAAGGTTGTTAACGTTCTG TAAAGGTAATATTTACAGATTGTAAGGTTGTTAACGTTCTG < 41bp 0.830007311465696 0.50984040252472 0.27133083 0.24596885 prediction 0.640333817881952 Functional Loss - TBPL1 ENSG00000028839 CDS Human protein_coding chr6:134305529 chr6:134305530 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5780 0 0 1 0 2 Ribosome 0.438684685320538 0.438718771253227 0 0 hPsi_site_11197 iPseU_CNN:0;iRNA_PseU:0 11198 chr19 16222725 16222725 1 + A G ACC 16222724 + 16222704 16222744 41 AGTGTAATATGGCGAAGACCTACGATTACCTGTTCAAGCTG AGTGTAATATGGCGAAGACCTGCGATTACCTGTTCAAGCTG < 41bp 0.820156481181895 0.426238939940156 0.4864432 0.28459555 prediction 0.640312962363789 Functional Loss - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16222724 chr19:16222725 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5781 0 0 1 0 0 Ribosome 0.438718666745606 0.438719449359975 0 0 hPsi_site_11198 iPseU_CNN:0;iRNA_PseU:0 11199 chr10 124152790 124152790 1 + T G UCEC 124152789 + 124152769 124152809 41 AAAATGAAAACAGTGGGAAATTTCTTCGAAGGTACTTCATA AAAATGAAAACAGTGGGAAATGTCTTCGAAGGTACTTCATA < 41bp 0.833932613873497 0.513780522379656 0.3360055 0.3097055 prediction 0.640304182987683 Functional Loss - PLEKHA1 ENSG00000107679 CDS Human protein_coding chr10:124152789 chr10:124152790 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5782 0 0 1 0 1 Ribosome 0.438715350196865 0.438718271632317 0 0 hPsi_site_11199 iPseU_CNN:0;iRNA_PseU:0 11200 chr9 98231280 98231280 1 + T C STAD 98231281 - 98231261 98231301 41 CTGTCCAGCTCCGCACGGAGTACGACCCCCACACGCACGTG CTGTCCAGCTCCGCACGGAGTGCGACCCCCACACGCACGTG < 41bp 0.82014105018821 0.406740223004634 0.8045415 0.37469786 prediction 0.640282100376419 Functional Loss - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98231281 chr9:98231280 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_5783 0 0 0 0 0 Endoplasmic reticulum 0.438718425572717 0.438718610365424 0.609083 0 hPsi_site_11200 iPseU_CNN:0.609083;iRNA_PseU:0 11201 chr9 89563646 89563646 1 + A G rs140873969 89563645 + 89563625 89563665 41 TCTGTCACAAAAATTAAGGCTAAATCTCCTCTCCAGAAGCA TCTGTCACAAAAATTAAGGCTGAATCTCCTCTCCAGAAGCA < 41bp 0.820135906070607 0.477784431959254 0.66273737 0.5040126 prediction 0.640271812141214 Functional Loss - GAS1RR ENSG00000226237 ncRNA_exonic Human lincRNA chr9:89563645 chr9:89563646 . . 0 22 hPsi_associated_SNPs_5784 0 0 0 0 0 unknown 0.438718590113323 0.438799223653347 0.31744954 0 hPsi_site_11201 iPseU_CNN:0.31744954;iRNA_PseU:0 11202 chr3 93803103 93803103 1 + A G UCEC 93803102 + 93803082 93803122 41 ATCCTAAATCAGTGAAGTGTTACCTTAGCAGAACTCCGGGC ATCCTAAATCAGTGAAGTGTTGCCTTAGCAGAACTCCGGGC < 41bp 0.907287356880039 0.587178776992974 0.7157065 0.32681674 prediction 0.64021715977413 Functional Loss - NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93803102 chr3:93803103 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5785 0 0 1 0 0 chromatin 0.438719043123102 0.438724972276986 0.431413 0 hPsi_site_11202 iPseU_CNN:0.431413;iRNA_PseU:0 11203 chr11 64802325 64802325 1 + T G KIRP 64802324 + 64802304 64802344 41 TCCTGGGGGCCGTAGGCCGGTTTGAAGCCTCAGTGATCGAG TCCTGGGGGCCGTAGGCCGGTGTGAAGCCTCAGTGATCGAG < 41bp 0.820102189942196 0.490581735209432 0.83025336 0.6379385 prediction 0.640204379884393 Functional Loss - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802324 chr11:64802325 nonsynonymous SNV 0.917 4 22 hPsi_associated_SNPs_5786 0 0 1 0 1 Ribosome 0.438718592995102 0.438738119625309 0.38462972 0 hPsi_site_11203 iPseU_CNN:0.38462972;iRNA_PseU:0 11204 chr11 3239569 3239569 1 + A G UCEC 3239568 + 3239548 3239588 41 AGGTGACGCTGGCCACGTGGTAGCGCGGGCAGACCAGGGGG AGGTGACGCTGGCCACGTGGTGGCGCGGGCAGACCAGGGGG < 41bp 0.820089340176726 0.436648753565359 0.73319244 0.2461178 prediction 0.640178680353453 Functional Loss - MRGPRG ENSG00000182170 CDS Human protein_coding chr11:3239568 chr11:3239569 nonsynonymous SNV 0.054 0 22 hPsi_associated_SNPs_5787 0 0 0 0 0 unknown 0.437866501340472 0.439083900093166 0.46638488 0 hPsi_site_11204 iPseU_CNN:0.46638488;iRNA_PseU:0 11205 chr17 4800542 4800542 1 + A C KIRC 4800541 + 4800521 4800561 41 CTGGGGGCAGCAGCCAAGTTTACTTCATGACTCTGAACCGT CTGGGGGCAGCAGCCAAGTTTCCTTCATGACTCTGAACCGT < 41bp 0.86044222908837 0.540356180209558 0.77420616 0.7430303 prediction 0.640172097757625 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800541 chr17:4800542 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5788 0 0 1 0 1 Ribosome 0.438718523520363 0.43871854889043 0.0623517199999999 0 hPsi_site_11205 iPseU_CNN:0.0623517199999999;iRNA_PseU:0 11206 chr8 17125856 17125856 1 + A G STAD 17125855 + 17125835 17125875 41 TAATGGATAAACAAGGAGTGTATGTTACCTCTCCATTAGTA TAATGGATAAACAAGGAGTGTGTGTTACCTCTCCATTAGTA < 41bp 0.820081861766391 0.421079129030241 0.5423528 0.31507272 prediction 0.640163723532782 Functional Loss - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17125855 chr8:17125856 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5789 0 0 0 0 2 chromatin 0.438724117973659 0.4387194790984 0.0847055999999999 0 hPsi_site_11206 iPseU_CNN:0.0847055999999999;iRNA_PseU:0 11207 chr6 118635328 118635328 1 + A C LGG 118635327 + 118635307 118635347 41 TTCAGGACCTGTTGTGGACTTACCGACCACAGCTCAGGTGG TTCAGGACCTGTTGTGGACTTCCCGACCACAGCTCAGGTGG < 41bp 0.820077585665713 0.479670962659659 0.6523479 0.31300026 prediction 0.640155171331426 Functional Loss - SLC35F1 ENSG00000196376 CDS Human protein_coding chr6:118635327 chr6:118635328 nonsynonymous SNV 0.178 0 22 hPsi_associated_SNPs_5790 0 0 0 0 0 Nucleus 0.438761126181817 0.438724607710802 0.3046958 0 hPsi_site_11207 iPseU_CNN:0.3046958;iRNA_PseU:0 11208 chr2 25038564 25038564 1 + T G rs147672058 25038563 + 25038543 25038583 41 CCAACATCCAGCACTTCCTGTTCAGTCTCTGCGAGTACCTG CCAACATCCAGCACTTCCTGTGCAGTCTCTGCGAGTACCTG < 41bp 0.847131452294031 0.527059208762065 0.7645157 0.6455984 prediction 0.640144487063932 Functional Loss - CENPO ENSG00000138092 CDS Human protein_coding chr2:25038563 chr2:25038564 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_5791 0 0 1 0 1 Ribosome 0.438718589267215 0.43871904693227 0.2378346 0 hPsi_site_11208 iPseU_CNN:0.2378346;iRNA_PseU:0 11209 chr6 52285112 52285112 1 + A G LIHC 52285111 + 52285091 52285131 41 GAGTTCCGGATGTTTAGCGTTACCATGGATCCTGGAGGTGC GAGTTCCGGATGTTTAGCGTTGCCATGGATCCTGGAGGTGC < 41bp 0.838650432960446 0.518579781864899 0.7934462 0.42236787 prediction 0.640141302191094 Functional Loss - EFHC1 ENSG00000096093 UTR5 Human protein_coding chr6:52285111 chr6:52285112 . . 0 22 hPsi_associated_SNPs_5792 0 0 0 0 0 Cytosol 0.436819423513356 0.43349162679522 0.5868924 0 hPsi_site_11209 iPseU_CNN:0.5868924;iRNA_PseU:0 11210 chr1 32504184 32504184 1 + A G LUSC 32504183 + 32504163 32504203 41 ATACATACGCAGAACAAAGTTACGAAGGCTACGAAGGCTAT ATACATACGCAGAACAAAGTTGCGAAGGCTACGAAGGCTAT < 41bp 0.820058903775661 0.410013069811944 0.6581205 0.27117008 prediction 0.640117807551322 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32504183 chr1:32504184 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_5793 0 0 1 0 1 Nucleus 0.438720927085251 0.438719722376098 0.316241 0 hPsi_site_11210 iPseU_CNN:0.316241;iRNA_PseU:0 11211 chr3 184102908 184102908 1 + A G LUSC 184102907 + 184102887 184102927 41 ATACCCACTGTCACCTGCACTATGAAGTGCTGCTGGCTGGG ATACCCACTGTCACCTGCACTGTGAAGTGCTGCTGGCTGGG < 41bp 0.820055967786278 0.395023508034199 0.29517555 0.2928635 prediction 0.640111935572555 Functional Loss - CHRD ENSG00000090539 CDS Human protein_coding chr3:184102907 chr3:184102908 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5794 0 0 1 0 0 nucleus 0.437348324180589 0.43235678914924 0 0 hPsi_site_11211 iPseU_CNN:0;iRNA_PseU:0 11212 chr2 233201240 233201240 1 + A G UCEC 233201239 + 233201219 233201259 41 CAGAGTCCACAGCCCTCAAGTACAGCGCCATCCTGAAGCGG CAGAGTCCACAGCCCTCAAGTGCAGCGCCATCCTGAAGCGG < 41bp 0.820054355822607 0.426318935275106 0.6294884 0.40823412 prediction 0.640108711645213 Functional Loss - DIS3L2 ENSG00000144535 CDS Human protein_coding chr2:233201239 chr2:233201240 nonsynonymous SNV 0.922 3 22 hPsi_associated_SNPs_5795 0 0 0 0 1 chromatin 0.438720581634718 0.438723688255491 0.2589768 0 hPsi_site_11212 iPseU_CNN:0.2589768;iRNA_PseU:0 11213 chr13 29252222 29252222 1 + A G LUAD 29252221 + 29252201 29252241 41 CCACACTTGATGGTGGAATATAAACTTGGTTTACTGTAATA CCACACTTGATGGTGGAATATGAACTTGGTTTACTGTAATA < 41bp 0.820050031215606 0.434625019861027 0.2880494 0.22488189 prediction 0.640100062431212 Functional Loss - POMP ENSG00000132963 CDS Human protein_coding chr13:29252221 chr13:29252222 nonsynonymous SNV 0.941 2 22 hPsi_associated_SNPs_5796 0 0 1 0 1 Ribosome 0.438718594374676 0.438718592518962 0 0 hPsi_site_11213 iPseU_CNN:0;iRNA_PseU:0 11214 chr1 44137373 44137373 1 + A C rs148308072 44137372 + 44137352 44137392 41 TCTGGCTCTTCACGGGATTCTATCTCTTCTGATTCAGAAAC TCTGGCTCTTCACGGGATTCTCTCTCTTCTGATTCAGAAAC < 41bp 0.820034178359468 0.45406428020821 0.5558886 0.34665734 prediction 0.640068356718935 Functional Loss - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44137372 chr1:44137373 nonsynonymous SNV 0.100 0 22 hPsi_associated_SNPs_5797 0 0 1 0 0 Nucleus 0.438661224452229 0.438715111807643 0.1117772 0 hPsi_site_11214 iPseU_CNN:0.1117772;iRNA_PseU:0 11215 chr18 21107837 21107837 1 + A G STAD 21107836 + 21107816 21107856 41 TCAACCATGAGTATAAAAAGTACCTGGATGCCGAGCAGAGT TCAACCATGAGTATAAAAAGTGCCTGGATGCCGAGCAGAGT < 41bp 0.819996220436686 0.397379607367736 0.79559684 0.28090096 prediction 0.639992440873373 Functional Loss - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21107836 chr18:21107837 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_5798 0 0 0 0 1 Ribosome 0.438718627269289 0.438718642545291 0.59119368 0 hPsi_site_11215 iPseU_CNN:0.59119368;iRNA_PseU:0 11216 chr8 22211843 22211843 1 + A G HNSC 22211842 + 22211822 22211862 41 GCTGTGGCATTCCTACGCATTATGTCTGTGTTCTCAACACC GCTGTGGCATTCCTACGCATTGTGTCTGTGTTCTCAACACC < 41bp 0.908830544465456 0.588840660434625 0.5664267 0.36935037 prediction 0.639979768061661 Functional Loss - PIWIL2 ENSG00000197181 CDS Human protein_coding chr8:22211842 chr8:22211843 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_5799 0 0 0 0 1 nucleus 0.44004459718305 0.439377945014626 0.1328534 0 hPsi_site_11216 iPseU_CNN:0.1328534;iRNA_PseU:0 11217 chr9 139306549 139306549 1 + A G DLBC 139306548 + 139306528 139306568 41 GTACCCAAGCCTGTTTTTGCTACAGTTGATGGACAGGAAAA GTACCCAAGCCTGTTTTTGCTGCAGTTGATGGACAGGAAAA < 41bp 0.89000492787308 0.570043426274264 0.26905864 0.211795 prediction 0.639923003197631 Functional Loss - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306548 chr9:139306549 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_5800 0 0 1 1 0 Cytosol 0.438718603763328 0.438718620280866 0 0 hPsi_site_11217 iPseU_CNN:0;iRNA_PseU:0 11218 chrX 75649956 75649956 1 + A C READ 75649955 + 75649935 75649975 41 GCCCACCTGGAGTGCATTTTTAGGTTTGAATTGAGAGAACT GCCCACCTGGAGTGCATTTTTCGGTTTGAATTGAGAGAACT < 41bp 0.819947181904214 0.460452503839601 0.23221537 0.2199322 prediction 0.639894363808429 Functional Loss - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75649955 chrX:75649956 synonymous SNV . 0 22 hPsi_associated_SNPs_5801 0 0 0 0 0 membrane 0.438793154486236 0.438718618192815 0 0 hPsi_site_11218 iPseU_CNN:0;iRNA_PseU:0 11219 chr10 22690126 22690126 1 + A G COAD 22690125 + 22690105 22690145 41 AAGAATATCCTGCAAAAATGTACCTACTTACCAGCCCTTGA AAGAATATCCTGCAAAAATGTGCCTACTTACCAGCCCTTGA < 41bp 0.81994563020746 0.402177936933035 0.62254745 0.23851907 prediction 0.63989126041492 Functional Loss - SPAG6 ENSG00000077327 CDS Human protein_coding chr10:22690125 chr10:22690126 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_5802 0 0 0 0 1 exosome 0.438718105881669 0.438719013791351 0.2450949 0 hPsi_site_11219 iPseU_CNN:0.2450949;iRNA_PseU:0 11220 chr17 47004360 47004360 1 + A G GBM 47004359 + 47004339 47004379 41 AGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATGCGC AGAAGCGGGGCCACTTTGACTGCCAGTCCCTCTTGATGCGC < 41bp 0.899024131679898 0.579091987916569 0.35307565 0.18420294 prediction 0.63986428752666 Functional Loss - UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004359 chr17:47004360 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5803 0 0 1 0 1 Ribosome 0.438718595320703 0.438718595281508 0 0 hPsi_site_11220 iPseU_CNN:0;iRNA_PseU:0 11221 chr3 160952611 160952611 1 + T G UCEC 160952610 + 160952590 160952630 41 CATAGAGTAGAAGCTAAGGATTTCTGGAAGGCTGTGATTCA CATAGAGTAGAAGCTAAGGATGTCTGGAAGGCTGTGATTCA < 41bp 0.819919439330113 0.48920146217565 0.5437323 0.35439202 prediction 0.639838878660225 Functional Loss - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160952610 chr3:160952611 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5804 0 0 1 0 2 Nucleus 0.438718630182053 0.438718566801616 0.0874645999999999 0 hPsi_site_11221 iPseU_CNN:0.0874645999999999;iRNA_PseU:0 11222 chr1 160328312 160328312 1 + A G rs200012785 160328311 + 160328291 160328331 41 CTCATGCCAGATTTTGGGATTACAAATAGAAGCTTCTTGCT CTCATGCCAGATTTTGGGATTGCAAATAGAAGCTTCTTGCT < 41bp 0.878562678112662 0.558659058369946 0.5557137 0.3285312 prediction 0.639807239485431 Functional Loss - NCSTN ENSG00000162736 UTR3 Human protein_coding chr1:160328311 chr1:160328312 . . 0 22 hPsi_associated_SNPs_5805 0 0 1 0 0 Endoplasmic reticulum 0.43872463285837 0.438698901393432 0.1114274 0 hPsi_site_11222 iPseU_CNN:0.1114274;iRNA_PseU:0 11223 chr6 151790655 151790655 1 + A C rs146957912 151790654 + 151790634 151790674 41 TTCCAGGAAGCATGGGATTTTATTTTGCTTGATTTTGGGCA TTCCAGGAAGCATGGGATTTTCTTTTGCTTGATTTTGGGCA < 41bp 0.829354860938549 0.509451916463759 0.35510808 0.2975003 prediction 0.639805888949579 Functional Loss - ARMT1 ENSG00000146476 UTR3 Human protein_coding chr6:151790654 chr6:151790655 . . 0 22 hPsi_associated_SNPs_5806 0 0 1 0 0 Ribosome 0.43804928021771 0.438724077192812 0 0 hPsi_site_11223 iPseU_CNN:0;iRNA_PseU:0 Lethal Encephalopathy Lethal Encephalopathy 11224 chrX 152227991 152227991 1 + A G rs145951598 152227990 + 152227970 152228010 41 CTCACCTGTGTAGGCCCCTGTAGTGACCCACGCGTCCAGCA CTCACCTGTGTAGGCCCCTGTGGTGACCCACGCGTCCAGCA < 41bp 0.819891118248805 0.434455808723546 0.47026327 0.29424593 prediction 0.63978223649761 Functional Loss - PNMA3 ENSG00000183837 UTR3 Human protein_coding chrX:152227990 chrX:152227991 . . 0 22 hPsi_associated_SNPs_5807 0 0 0 0 0 exosome 0.438718550555712 0.438718739527929 0 0 hPsi_site_11224 iPseU_CNN:0;iRNA_PseU:0 Lethal Encephalopathy Lethal Encephalopathy 11225 chr11 123464839 123464839 1 + T G UCEC 123464838 + 123464818 123464858 41 ATGAAGACTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACG ATGAAGACTTCAGAAAGCTCTGTAAGCAGCTTCCAGACACG < 41bp 0.819883669586079 0.4806281157453 0.40995294 0.29832408 prediction 0.639767339172158 Functional Loss - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123464838 chr11:123464839 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5808 0 0 0 0 2 Cytosol 0.439018605320917 0.520761672382601 0 0 hPsi_site_11225 iPseU_CNN:0;iRNA_PseU:0 11226 chr1 160151770 160151770 1 + T G LUAD 160151769 + 160151749 160151789 41 AGGAGACACTCTTGGCTGCATTTCTGTCCTACACTCCAGGC AGGAGACACTCTTGGCTGCATGTCTGTCCTACACTCCAGGC < 41bp 0.8356811790715 0.515810523487312 0.44276178 0.24372384 prediction 0.639741311168375 Functional Loss - ATP1A4 ENSG00000132681 CDS Human protein_coding chr1:160151769 chr1:160151770 nonsynonymous SNV 0.956 2 22 hPsi_associated_SNPs_5809 0 0 0 1 2 exosome 0.438719058703977 0.438718699920763 0 0 hPsi_site_11226 iPseU_CNN:0;iRNA_PseU:0 11227 chr1 46476436 46476436 1 + T G UCEC 46476435 + 46476415 46476455 41 TGGAAGAGCGACTAGCAGAGTTTATTTCCTCCAACACTCCA TGGAAGAGCGACTAGCAGAGTGTATTTCCTCCAACACTCCA < 41bp 0.826026303076124 0.506166439018553 0.5126189 0.35876998 prediction 0.639719728115142 Functional Loss - MAST2 ENSG00000086015 CDS Human protein_coding chr1:46476435 chr1:46476436 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_5810 0 0 1 0 1 Ribosome 0.438235774143558 0.438698449891921 0.0252378 0 hPsi_site_11227 iPseU_CNN:0.0252378;iRNA_PseU:0 11228 chrX 129045028 129045028 1 + A C UCEC 129045027 + 129045007 129045047 41 GCAGATCTGCTTGAGCCTGTTAAAACTTCATCTTCTTTGGC GCAGATCTGCTTGAGCCTGTTCAAACTTCATCTTCTTTGGC < 41bp 0.87232645860589 0.552487807310123 0.6574129 0.6303079 prediction 0.639677302591534 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129045027 chrX:129045028 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_5811 0 0 1 0 2 Cytosol 0.438870325641311 0.439065290534938 0.0542099999999999 0 hPsi_site_11228 iPseU_CNN:0.0542099999999999;iRNA_PseU:0 11229 chr17 37881392 37881392 1 + A G BLCA 37881391 + 37881371 37881411 41 AGTCCCAACCATGTCAAAATTACAGACTTCGGGCTGGCTCG AGTCCCAACCATGTCAAAATTGCAGACTTCGGGCTGGCTCG < 41bp 0.905713253228408 0.585877517694716 0.27353832 0.28492665 prediction 0.639671471067385 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37881391 chr17:37881392 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5812 0 0 1 0 2 Cytosol 0.438715437078573 0.438717631941411 0 0 hPsi_site_11229 iPseU_CNN:0;iRNA_PseU:0 11230 chr14 22133608 22133608 1 + A G CESC 22133607 + 22133587 22133627 41 CATCACACAGCTCTTCTTCCTACATCTCTTTGCCTGTGCCG CATCACACAGCTCTTCTTCCTGCATCTCTTTGCCTGTGCCG < 41bp 0.893814264193581 0.573980247806311 0.5710952 0.26898924 prediction 0.639668032774539 Functional Loss - OR4E2 ENSG00000221977 CDS Human protein_coding chr14:22133607 chr14:22133608 synonymous SNV . 0 22 hPsi_associated_SNPs_5813 0 0 0 0 0 unknown 0.438718593311817 0.43871880579914 0.1421904 0 hPsi_site_11230 iPseU_CNN:0.1421904;iRNA_PseU:0 11231 chr22 20130889 20130889 1 + A G COAD 20130888 + 20130868 20130908 41 TCTTCGGCGACTCAGGCGTCTATGACGCTCCCAGCTCCTAC TCTTCGGCGACTCAGGCGTCTGTGACGCTCCCAGCTCCTAC < 41bp 0.903823651502776 0.583997085513657 0.7494841 0.46593004 prediction 0.639653131978239 Functional Loss - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20130888 chr22:20130889 nonsynonymous SNV 0.831 3 22 hPsi_associated_SNPs_5814 0 0 1 0 0 Endoplasmic reticulum 0.438718924661538 0.438719110728036 0.4989682 0 hPsi_site_11231 iPseU_CNN:0.4989682;iRNA_PseU:0 not specified not specified 11232 chr12 67696217 67696217 1 + A G LUAD 67696216 + 67696196 67696236 41 ATGAAATGCTTCCAGAATTCTACAAGACCGTCTCTCCTGCA ATGAAATGCTTCCAGAATTCTGCAAGACCGTCTCTCCTGCA < 41bp 0.819791481910198 0.401475115552752 0.8169775 0.3358755 prediction 0.639582963820396 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67696216 chr12:67696217 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5815 0 0 1 0 0 Nucleus 0.439730090790628 0.438842276871255 0.633955 0 hPsi_site_11232 iPseU_CNN:0.633955;iRNA_PseU:0 11233 chr12 57865117 57865117 1 + A G LUSC 57865116 + 57865096 57865136 41 AATATCTCCAGTCAGGCCCCTATACCCAGCCACCCCCTGAT AATATCTCCAGTCAGGCCCCTGTACCCAGCCACCCCCTGAT < 41bp 0.819788191921842 0.390919863407747 0.31532896 0.24880934 prediction 0.639576383843684 Functional Loss - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57865116 chr12:57865117 nonsynonymous SNV 0.953 3 22 hPsi_associated_SNPs_5816 0 0 0 0 0 nucleoplasm 0.438721271534414 0.438720000295011 0 0 hPsi_site_11233 iPseU_CNN:0;iRNA_PseU:0 11234 chr19 56204360 56204360 1 + T G LUAD 56204359 + 56204339 56204379 41 GCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCAC GCCCGACGAGTTCTCTGACTTGGACCGACTCCGCACGGCAC < 41bp 0.842606377970474 0.522851104466509 0.6302315 0.34055936 prediction 0.639510547007929 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56204359 chr19:56204360 nonsynonymous SNV 0.875 0 22 hPsi_associated_SNPs_5817 0 0 1 0 3 chromatin 0.438729460450184 0.438678634881364 0.260463 0 hPsi_site_11234 iPseU_CNN:0.260463;iRNA_PseU:0 11235 chr6 109586120 109586120 1 + T G UCEC 109586119 + 109586099 109586139 41 CAGACCAGCCACCTCCTGTGTTTATAACCTCTCTGCTGGAG CAGACCAGCCACCTCCTGTGTGTATAACCTCTCTGCTGGAG < 41bp 0.832533868489693 0.512780504771299 0.5594879 0.3426268 prediction 0.639506727436788 Functional Loss - C6orf183 ENSG00000243587;ENSG00000233908 intergenic Human other chr6:109586119 chr6:109586120 . . 0 22 hPsi_associated_SNPs_5818 0 0 1 0 1 unknown 0.438718154921102 0.43871306156672 0.1189758 0 hPsi_site_11235 iPseU_CNN:0.1189758;iRNA_PseU:0 11236 chr8 22272360 22272360 1 + A C READ 22272359 + 22272339 22272379 41 CAGTGGTGTTTGGGGGCTTTTATCTTTTCTTTTTCACAGAG CAGTGGTGTTTGGGGGCTTTTCTCTTTTCTTTTTCACAGAG < 41bp 0.873098065147724 0.553360166601638 0.29517084 0.2613503 prediction 0.639475797092172 Functional Loss - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22272359 chr8:22272360 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_5819 0 0 1 0 2 Endoplasmic reticulum 0.438718498838155 0.438718850511911 0 0 hPsi_site_11236 iPseU_CNN:0;iRNA_PseU:0 11237 chrX 153657458 153657458 1 + A G rs74526112 153657457 + 153657437 153657477 41 ACCAGCGACTTGCAGCTCTCTACCTACTTAGATCCCGCCCT ACCAGCGACTTGCAGCTCTCTGCCTACTTAGATCCCGCCCT < 41bp 0.901274296371068 0.581547931527845 0.6478266 0.2716984 prediction 0.639452729686446 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153657457 chrX:153657458 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_5820 0 0 1 0 2 Ribosome 0.438756050488749 0.438618300983788 0.2956532 0 hPsi_site_11237 iPseU_CNN:0.2956532;iRNA_PseU:0 11238 chr11 129999033 129999033 1 + A G STAD 129999032 + 129999012 129999052 41 CACCTGGCCCGAGTGGAAGCTATGCTGAATGACCGCCGTCG CACCTGGCCCGAGTGGAAGCTGTGCTGAATGACCGCCGTCG < 41bp 0.819724263730445 0.396330317724263 0.5200458 0.337462 prediction 0.639448527460889 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129999032 chr11:129999033 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_5821 0 0 1 0 2 Endoplasmic reticulum 0.438719068069864 0.438718635918616 0.0400916 0 hPsi_site_11238 iPseU_CNN:0.0400916;iRNA_PseU:0 11239 chr7 137773399 137773399 1 + A G STAD 137773398 + 137773378 137773418 41 AGGTTGCTATTGACACAGGGTACCGACATATTGATGGGGCC AGGTTGCTATTGACACAGGGTGCCGACATATTGATGGGGCC < 41bp 0.819706632420816 0.406728195175751 0.61794823 0.3095901 prediction 0.639413264841633 Functional Loss - AKR1D1 ENSG00000122787 CDS Human protein_coding chr7:137773398 chr7:137773399 nonsynonymous SNV 0.804 4 22 hPsi_associated_SNPs_5822 0 0 1 2 1 cytosol 0.438722431628661 0.43871885492232 0.23589646 0 hPsi_site_11239 iPseU_CNN:0.23589646;iRNA_PseU:0 11240 chr22 31675498 31675498 1 + A C rs114628619 31675497 + 31675477 31675517 41 AGCTGAGATGCTGAGAGAGATAGCTCCCTGAGCTGGGCCAT AGCTGAGATGCTGAGAGAGATCGCTCCCTGAGCTGGGCCAT < 41bp 0.832725164113578 0.513024948821439 0.28939062 0.2610138 prediction 0.639400430584277 Functional Loss - LIMK2 ENSG00000182541 UTR3 Human protein_coding chr22:31675497 chr22:31675498 . . 0 22 hPsi_associated_SNPs_5823 0 0 0 0 0 Cytosol 0.438677580813436 0.439493427399911 0 0 hPsi_site_11240 iPseU_CNN:0;iRNA_PseU:0 11241 chr16 29367253 29367253 1 + A G COAD 29367252 + 29367232 29367272 41 ACGAACACTCCCTGGAGCGCTACCTGCACATGCTCCTGGCC ACGAACACTCCCTGGAGCGCTGCCTGCACATGCTCCTGGCC < 41bp 0.889971664827516 0.570274113219997 0.96932197 0.65040576 prediction 0.639395103215039 Functional Loss - SNX29P2 ENSG00000198106;ENSG00000271699 ncRNA_exonic Human other chr16:29367252 chr16:29367253 . . 0 22 hPsi_associated_SNPs_5824 0 0 0 0 1 unknown 0.438695122328718 0.438719812383154 0.63783242 0 hPsi_site_11241 iPseU_CNN:0.63783242;iRNA_PseU:0 11242 chr3 111705847 111705847 1 + A G UCEC 111705846 + 111705826 111705866 41 GGTCGTGGCTCTTATTGGTGTAGCTACAGCTGCAGATACCT GGTCGTGGCTCTTATTGGTGTGGCTACAGCTGCAGATACCT < 41bp 0.901490988477243 0.581800835376638 0.32652494 0.21700165 prediction 0.639380306201211 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111705846 chr3:111705847 synonymous SNV . 0 22 hPsi_associated_SNPs_5825 0 0 1 0 2 Ribosome 0.438707563308611 0.438718593919173 0 0 hPsi_site_11242 iPseU_CNN:0;iRNA_PseU:0 Diamond-Blackfan anemia Diamond-Blackfan anemia 11243 chr17 65735703 65735703 1 + A G UCEC 65735702 + 65735682 65735722 41 TACTATGACTCTTCCTGGAATACACCCACCTACCTTGAACC TACTATGACTCTTCCTGGAATGCACCCACCTACCTTGAACC < 41bp 0.819663377838497 0.41458439578495 0.61459064 0.38674045 prediction 0.639326755676995 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735702 chr17:65735703 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_5826 0 0 0 0 2 Nucleus 0.438718592060463 0.438718592114684 0.22918128 0 hPsi_site_11243 iPseU_CNN:0.22918128;iRNA_PseU:0 11244 chr1 110561048 110561048 1 + A C STAD 110561047 + 110561027 110561067 41 GATCGCATGAAAAACAGTTGTATCGTATGCAATATGGGCCA GATCGCATGAAAAACAGTTGTCTCGTATGCAATATGGGCCA < 41bp 0.874241892302002 0.554600714587937 0.67087835 0.5554663 prediction 0.639282355428128 Functional Loss - AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110561047 chr1:110561048 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_5827 0 0 1 0 2 Ribosome 0.438719180752512 0.437512398430553 0.2308241 0 hPsi_site_11244 iPseU_CNN:0.2308241;iRNA_PseU:0 11245 chr2 171804911 171804911 1 + T G READ 171804910 + 171804890 171804930 41 GGTTTGGAGCCTTTCTTTGATTTTATTGTTTCTATTAATGG GGTTTGGAGCCTTTCTTTGATGTTATTGTTTCTATTAATGG < 41bp 0.828030882642909 0.508391336934049 0.3073629 0.29133368 prediction 0.63927909141772 Functional Loss - GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171804910 chr2:171804911 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5828 0 0 1 0 2 Ribosome 0.438718577297651 0.438718592978545 0 0 hPsi_site_11245 iPseU_CNN:0;iRNA_PseU:0 11246 chr5 64863403 64863403 1 + A G UCEC 64863402 + 64863382 64863422 41 CATCCATGTATGAGCGCAGTTACATGCATAGAGATGTTATC CATCCATGTATGAGCGCAGTTGCATGCATAGAGATGTTATC < 41bp 0.894814078186152 0.575179489405207 0.4837885 0.21349806 prediction 0.639269177561891 Functional Loss - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64863402 chr5:64863403 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5829 0 0 1 0 2 chromatin 0.438723279942574 0.438738597257931 0 0 hPsi_site_11246 iPseU_CNN:0;iRNA_PseU:0 11247 chr5 7878144 7878144 1 + A G SKCM 7878143 + 7878123 7878163 41 AAGCAGAGGACAAGAGGAGATAAGTGGCGCACTCCCGGTGG AAGCAGAGGACAAGAGGAGATGAGTGGCGCACTCCCGGTGG < 41bp 0.819620935116687 0.400771308869222 0.5917413 0.23946118 prediction 0.639241870233373 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7878143 chr5:7878144 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5830 0 0 1 0 1 Nucleus 0.438718592994281 0.438718254616687 0.1834826 0 hPsi_site_11247 iPseU_CNN:0.1834826;iRNA_PseU:0 11248 chrX 51079660 51079660 1 + A G rs781963760 51079659 + 51079639 51079679 41 ATACTACACTATCTGTAAAATATATTTGCAAAGCCAGGCAC ATACTACACTATCTGTAAAATGTATTTGCAAAGCCAGGCAC < 41bp 0.881092428581563 0.561516040980361 0.36612403 0.24292967 prediction 0.639152775202403 Functional Loss - NUDT10 ENSG00000122824 UTR3 Human protein_coding chrX:51079659 chrX:51079660 . . 0 22 hPsi_associated_SNPs_5831 0 0 0 0 0 exosome 0.437202968704102 0.436394198242959 0 0 hPsi_site_11248 iPseU_CNN:0;iRNA_PseU:0 11249 chr19 55085916 55085916 1 + A G rs543220734 55085915 + 55085895 55085935 41 AGCATCCTGGGTTAGACGGATACAAGAGCCTGGGAAGAATG AGCATCCTGGGTTAGACGGATGCAAGAGCCTGGGAAGAATG < 41bp 0.819571540242405 0.414143970477789 0.83482236 0.58230335 prediction 0.639143080484809 Functional Loss - LILRA2 ENSG00000239998 CDS Human protein_coding chr19:55085915 chr19:55085916 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5832 0 0 0 0 0 Cytosol 0.438718518598002 0.438696038783419 0.50503802 0 hPsi_site_11249 iPseU_CNN:0.50503802;iRNA_PseU:0 11250 chr6 35050583 35050583 1 + A G UCEC 35050582 + 35050562 35050602 41 TCATCTTCGAGTCCTGTGGTTATGAAGCCAATGTGAGTTGC TCATCTTCGAGTCCTGTGGTTGTGAAGCCAATGTGAGTTGC < 41bp 0.819569744821958 0.410806538646189 0.58237654 0.25993973 prediction 0.639139489643916 Functional Loss - ANKS1A ENSG00000064999 CDS Human protein_coding chr6:35050582 chr6:35050583 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_5833 0 0 0 0 1 Cytosol 0.438718145950615 0.438697807721198 0.16475308 0 hPsi_site_11250 iPseU_CNN:0.16475308;iRNA_PseU:0 11251 chr19 36362917 36362917 1 + A G UCEC 36362916 + 36362896 36362936 41 GTCCCACCCCCAAGCTCCCATACACTTGCAGTGGTCGGCAA GTCCCACCCCCAAGCTCCCATGCACTTGCAGTGGTCGGCAA < 41bp 0.903520406072581 0.58395785466185 0.26289707 0.20394975 prediction 0.639125102821462 Functional Loss - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36362916 chr19:36362917 nonsynonymous SNV 0.307 1 22 hPsi_associated_SNPs_5834 0 0 0 0 1 Endoplasmic reticulum 0.438730472447727 0.438718466342914 0 0 hPsi_site_11251 iPseU_CNN:0;iRNA_PseU:0 11252 chr14 55817618 55817618 1 + T G DLBC 55817617 + 55817597 55817637 41 GGTGGAAAGGATGAGGGAGGTTAACAGCAGGTGCTACCAAC GGTGGAAAGGATGAGGGAGGTGAACAGCAGGTGCTACCAAC < 41bp 0.819561972618288 0.497703755195924 0.2542687 0.23297137 prediction 0.639123945236575 Functional Loss - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55817617 chr14:55817618 synonymous SNV . 0 22 hPsi_associated_SNPs_5835 0 0 1 0 0 Nucleus 0.438710879589586 0.438380740265218 0 0 hPsi_site_11252 iPseU_CNN:0;iRNA_PseU:0 11253 chr1 28897783 28897783 1 + A G ESCA 28897782 + 28897762 28897802 41 ACTACTATGCTCAGTGGGGCTATGACCAGAACACAGGCAGC ACTACTATGCTCAGTGGGGCTGTGACCAGAACACAGGCAGC < 41bp 0.900242457401219 0.580680618483668 0.23171738 0.10163289 prediction 0.639123677835102 Functional Loss - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28897782 chr1:28897783 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5836 0 0 1 0 2 Ribosome 0.438712026131451 0.438716618277587 0 0 hPsi_site_11253 iPseU_CNN:0;iRNA_PseU:0 11254 chr20 32254442 32254442 1 + A G rs79959038 32254441 + 32254421 32254461 41 CCCGGGGGCTTCTTAGGATCTAAAAGGATCAGTCCTAGCCA CCCGGGGGCTTCTTAGGATCTGAAAGGATCAGTCCTAGCCA < 41bp 0.819559309885994 0.45357804199282 0.831151 0.3628385 prediction 0.639118619771989 Functional Loss - ACTL10 ENSG00000125967;ENSG00000182584 UTR5 Human other chr20:32254441 chr20:32254442 . . 0 22 hPsi_associated_SNPs_5837 0 0 0 0 0 exosome 0.438716945990746 0.43876188388549 0.662302 0 hPsi_site_11254 iPseU_CNN:0.662302;iRNA_PseU:0 11255 chr22 20921084 20921084 1 + A G COAD 20921083 + 20921063 20921103 41 CTCCCTGGACAAATGTTGTATACCCAACCACCACTGAAATT CTCCCTGGACAAATGTTGTATGCCCAACCACCACTGAAATT < 41bp 0.81955925203234 0.413880917573101 0.35724127 0.25861514 prediction 0.639118504064681 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20921083 chr22:20921084 nonsynonymous SNV 0.856 0 22 hPsi_associated_SNPs_5838 0 0 1 0 0 Cytosol 0.438718592994872 0.438718592995096 0 0 hPsi_site_11255 iPseU_CNN:0;iRNA_PseU:0 11256 chr3 38307384 38307384 1 + A G UCEC 38307383 + 38307363 38307403 41 TGTCCAGGTCCTGGCTGAAATAGGTGACTTTGGTCGCTTCC TGTCCAGGTCCTGGCTGAAATGGGTGACTTTGGTCGCTTCC < 41bp 0.819548409388243 0.426720596814591 0.7885684 0.7150783 prediction 0.639096818776486 Functional Loss - SLC22A13 ENSG00000172940 CDS Human protein_coding chr3:38307383 chr3:38307384 nonsynonymous SNV 0.947 1 22 hPsi_associated_SNPs_5839 0 0 0 1 0 chromatin 0.43871860634143 0.438718592997455 0.1469802 0 hPsi_site_11256 iPseU_CNN:0.1469802;iRNA_PseU:0 11257 chr5 177632889 177632889 1 + T G STAD 177632888 + 177632868 177632908 41 TGGGATACTAGCAAAAAAGATTTAAAAGACTATTTTACTAA TGGGATACTAGCAAAAAAGATGTAAAAGACTATTTTACTAA < 41bp 0.819540047142776 0.495209945686397 0.30044377 0.22838324 prediction 0.639080094285552 Functional Loss - HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177632888 chr5:177632889 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_5840 0 0 1 0 1 Cytosol 0.438851548667122 0.438738107521817 0 0 hPsi_site_11257 iPseU_CNN:0;iRNA_PseU:0 11258 chr4 146468031 146468031 1 + A G STAD 146468030 + 146468010 146468050 41 CTTGGGCTGCTCTCCAATGTTAACCGGAATTCCACTATTGA CTTGGGCTGCTCTCCAATGTTGACCGGAATTCCACTATTGA < 41bp 0.819533319916074 0.403372833032254 0.33740723 0.22662684 prediction 0.639066639832148 Functional Loss - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146468030 chr4:146468031 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5841 0 0 0 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995345 0 0 hPsi_site_11258 iPseU_CNN:0;iRNA_PseU:0 11259 chr22 36054996 36054996 1 + A G COAD 36054995 + 36054975 36055015 41 GTCACCAGCATCGTGAGTGGTACGTTGGAACGCTCCAAAAA GTCACCAGCATCGTGAGTGGTGCGTTGGAACGCTCCAAAAA < 41bp 0.819520889450056 0.412715149547644 0.87604105 0.6084226 prediction 0.639041778900111 Functional Loss - APOL6 ENSG00000221963 CDS Human protein_coding chr22:36054995 chr22:36054996 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5842 0 0 0 0 0 Nucleus 0.438708181234191 0.438716504543263 0.5352369 0 hPsi_site_11259 iPseU_CNN:0.5352369;iRNA_PseU:0 11260 chr13 103309516 103309516 1 + T G COAD 103309515 + 103309495 103309535 41 GAAAGATTTAAAAGAAGAGTTTACTGAAGCATTACGAGATC GAAAGATTTAAAAGAAGAGTTGACTGAAGCATTACGAGATC < 41bp 0.823484628288269 0.503967925653504 0.5452915 0.20301789 prediction 0.639033405269531 Functional Loss - TPP2 ENSG00000134900 CDS Human protein_coding chr13:103309515 chr13:103309516 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5843 0 0 1 0 1 Nucleus 0.438725461719261 0.438336290609615 0.0905830000000001 0 hPsi_site_11260 iPseU_CNN:0.0905830000000001;iRNA_PseU:0 11261 chr4 44688653 44688653 1 + A G HNSC 44688652 + 44688632 44688672 41 TTCCAAAGGAGATAAAATTGTATCTGCACATACTCAAAAGA TTCCAAAGGAGATAAAATTGTGTCTGCACATACTCAAAAGA < 41bp 0.819507433152108 0.408705297779581 0.55446446 0.32148862 prediction 0.639014866304217 Functional Loss - GUF1 ENSG00000151806 CDS Human protein_coding chr4:44688652 chr4:44688653 synonymous SNV . 0 22 hPsi_associated_SNPs_5844 0 0 1 4 1 Ribosome 0.438727980955008 0.438719558558452 0.10892892 0 hPsi_site_11261 iPseU_CNN:0.10892892;iRNA_PseU:0 11262 chr11 45946107 45946107 1 + A C GBM 45946106 + 45946086 45946126 41 CTACTCCGGCCTCTATGGGCTAATGAAGCTGGTGCTGCCCA CTACTCCGGCCTCTATGGGCTCATGAAGCTGGTGCTGCCCA < 41bp 0.878874890127985 0.55937193574599 0.6300737 0.2758349 prediction 0.63900590876399 Functional Loss - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45946106 chr11:45946107 synonymous SNV . 0 22 hPsi_associated_SNPs_5845 0 0 0 0 1 chromatin 0.438718332295625 0.438787247942531 0.2601474 0 hPsi_site_11262 iPseU_CNN:0.2601474;iRNA_PseU:0 11263 chr11 118498282 118498282 1 + A G BRCA 118498281 + 118498261 118498301 41 CCATGTCTGTGGGCTCCAGCTATGAGAACACCTCTCCAGCC CCATGTCTGTGGGCTCCAGCTGTGAGAACACCTCTCCAGCC < 41bp 0.901166571696492 0.581704234370957 0.56771827 0.33196232 prediction 0.63892467465107 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118498281 chr11:118498282 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5846 0 0 1 0 0 Cytosol 0.438112231436363 0.431070272844894 0.13543654 0 hPsi_site_11263 iPseU_CNN:0.13543654;iRNA_PseU:0 Mitochondrial phosphate carrier deficiency Mitochondrial phosphate carrier deficiency 11264 chr3 51671315 51671315 1 + A G UCEC 51671314 + 51671294 51671334 41 GCCGGGTGGTGCTGACTGGGTACCCTCTGCAAAACAACCTC GCCGGGTGGTGCTGACTGGGTGCCCTCTGCAAAACAACCTC < 41bp 0.892749674962848 0.573288133936565 0.71791536 0.25774318 prediction 0.638923082052565 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51671314 chr3:51671315 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5847 0 0 1 0 0 chromatin 0.438718590444165 0.438717201640073 0.43583072 0 hPsi_site_11264 iPseU_CNN:0.43583072;iRNA_PseU:0 11265 chrX 151869994 151869994 1 + A C PRAD 151869993 + 151869973 151870013 41 CTGGGAGGAGCTGAGTGTGTTAGAGGTGTTTGAGGGGAGGG CTGGGAGGAGCTGAGTGTGTTCGAGGTGTTTGAGGGGAGGG < 41bp 0.862076881653934 0.542620266335174 0.48840517 0.32825392 prediction 0.638913230637521 Functional Loss - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869993 chrX:151869994 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_5848 0 0 1 0 0 Ribosome 0.438935318842978 0.438746118852028 0 0 hPsi_site_11265 iPseU_CNN:0;iRNA_PseU:0 11266 chr16 70400724 70400724 1 + A G COAD 70400723 + 70400703 70400743 41 TCCAGGCCTTGTGTAACCTCTACGGGGCCATCACCATTGCT TCCAGGCCTTGTGTAACCTCTGCGGGGCCATCACCATTGCT < 41bp 0.90884352104985 0.589422402190694 0.82973295 0.43774217 prediction 0.638842237718312 Functional Loss - DDX19A ENSG00000168872 CDS Human protein_coding chr16:70400723 chr16:70400724 nonsynonymous SNV 0.975 4 22 hPsi_associated_SNPs_5849 0 0 0 0 1 Ribosome 0.438719497754495 0.438718594999938 0.6594659 0 hPsi_site_11266 iPseU_CNN:0.6594659;iRNA_PseU:0 11267 chr1 186359924 186359924 1 + A G rs187494832 186359923 + 186359903 186359943 41 TTAGAGTGTACAGTTCACATTAATATTCACATCCCACTTTC TTAGAGTGTACAGTTCACATTGATATTCACATCCCACTTTC < 41bp 0.819414802406569 0.410143515685524 0.266852 0.21706185 prediction 0.638829604813138 Functional Loss - C1orf27 ENSG00000157181 CDS Human protein_coding chr1:186359923 chr1:186359924 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_5850 0 0 1 0 1 chromatin 0.438718582429067 0.438800373087976 0 0 hPsi_site_11267 iPseU_CNN:0;iRNA_PseU:0 11268 chrX 138530711 138530711 1 + A C rs6634072 138530710 + 138530690 138530730 41 CACTCACCATGAGCCATCAATATGCTCTGGTCTGACATGGT CACTCACCATGAGCCATCAATCTGCTCTGGTCTGACATGGT < 41bp 0.819406088968762 0.479757280997738 0.38801196 0.40669683 prediction 0.638812177937524 Functional Loss - SRD5A1P1 ENSG00000232549 downstream Human processed_pseudogene chrX:138530710 chrX:138530711 . . 0 22 hPsi_associated_SNPs_5851 0 0 0 0 0 unknown 0.437063116362942 0.437108365711929 0 0 hPsi_site_11268 iPseU_CNN:0;iRNA_PseU:0 11269 chr15 40568685 40568685 1 + A G rs2242120 40568684 + 40568664 40568704 41 AGACTGCTGGTCTCCACAGATACCTGCTGTTCTCAGCTCCA AGACTGCTGGTCTCCACAGATGCCTGCTGTTCTCAGCTCCA < 41bp 0.819403817563519 0.445978895575923 0.6881131 0.31939298 prediction 0.638807635127039 Functional Loss - BUB1B-PAK6;PAK6 ENSG00000137843 UTR3 Human protein_coding chr15:40568684 chr15:40568685 . . 0 22 hPsi_associated_SNPs_5852 0 0 0 2 0 unknown 0.438580247534037 0.438585370608757 0.3762262 0 hPsi_site_11269 iPseU_CNN:0.3762262;iRNA_PseU:0 11270 chr12 53675349 53675349 1 + A G UCEC 53675348 + 53675328 53675368 41 TCGATCAGACTACTGACACATACCTGCTCCTTTCCCTGACC TCGATCAGACTACTGACACATGCCTGCTCCTTTCCCTGACC < 41bp 0.81938070226468 0.396619294155541 0.32451585 0.2254897 prediction 0.63876140452936 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53675348 chr12:53675349 nonsynonymous SNV 0.801 0 22 hPsi_associated_SNPs_5853 0 0 1 0 2 Nucleus 0.438729095941123 0.438718593782801 0 0 hPsi_site_11270 iPseU_CNN:0;iRNA_PseU:0 11271 chr1 179783192 179783192 1 + T G LIHC 179783191 + 179783171 179783211 41 TGGAGGCGAGAGGCTCTCCTTTGCTCCCACATACTACAAAG TGGAGGCGAGAGGCTCTCCTTGGCTCCCACATACTACAAAG < 41bp 0.82758278252152 0.508226985191042 0.5452573 0.20638448 prediction 0.638711594660957 Functional Loss - FAM163A ENSG00000143340 CDS Human protein_coding chr1:179783191 chr1:179783192 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_5854 0 0 0 0 0 exosome 0.438718363897974 0.438731941634217 0.0905145999999999 0 hPsi_site_11271 iPseU_CNN:0.0905145999999999;iRNA_PseU:0 11272 chr11 125483013 125483013 1 + A G LUSC 125483012 + 125482992 125483032 41 GCCCGTGGTGGGGATGGCAGTAGGATCATATTTGATGACTT GCCCGTGGTGGGGATGGCAGTGGGATCATATTTGATGACTT < 41bp 0.819352750050904 0.398147932194757 0.24319562 0.18129647 prediction 0.638705500101808 Functional Loss - STT3A ENSG00000134910 CDS Human protein_coding chr11:125483012 chr11:125483013 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5855 0 0 1 0 1 Endoplasmic reticulum 0.43910062288784 0.437335174229825 0 0 hPsi_site_11272 iPseU_CNN:0;iRNA_PseU:0 11273 chr17 4800540 4800540 1 + T G KIRP 4800539 + 4800519 4800559 41 CTCTGGGGGCAGCAGCCAAGTTTACTTCATGACTCTGAACC CTCTGGGGGCAGCAGCCAAGTGTACTTCATGACTCTGAACC < 41bp 0.81972299266633 0.500412062922336 0.66408926 0.50388104 prediction 0.638621859487989 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800539 chr17:4800540 synonymous SNV . 0 22 hPsi_associated_SNPs_5856 0 0 1 0 1 Ribosome 0.4387184526218 0.438713438688823 0.32041644 0 hPsi_site_11273 iPseU_CNN:0.32041644;iRNA_PseU:0 11274 chr5 176523626 176523626 1 + A G LIHC 176523625 + 176523605 176523645 41 GTGGTCTTTTGGGATCCTGCTATGGGAGATCTTCACCCTCG GTGGTCTTTTGGGATCCTGCTGTGGGAGATCTTCACCCTCG < 41bp 0.819285190672591 0.396694756851054 0.6892966 0.570338 prediction 0.638570381345183 Functional Loss - FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176523625 chr5:176523626 synonymous SNV . 0 22 hPsi_associated_SNPs_5857 0 0 1 0 1 Endoplasmic reticulum 0.438720741305948 0.438718877697916 0.2379172 0 hPsi_site_11274 iPseU_CNN:0.2379172;iRNA_PseU:0 11275 chr8 11619163 11619163 1 + A G rs809204 11619162 + 11619142 11619182 41 ATGGAGCCAGGGGTGGGGAGTATTAGGACAAGCCCCGCACT ATGGAGCCAGGGGTGGGGAGTGTTAGGACAAGCCCCGCACT < 41bp 0.819260842327688 0.432590107377204 0.6400703 0.27526152 prediction 0.638521684655376 Functional Loss - C8orf49 ENSG00000255394 CDS Human lincRNA chr8:11619162 chr8:11619163 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_5858 0 0 0 0 0 unknown 0.438718631197013 0.438718581996017 0.2801406 0 hPsi_site_11275 iPseU_CNN:0.2801406;iRNA_PseU:0 11276 chr19 48984972 48984972 1 + A G rs574287440 48984971 + 48984951 48984991 41 GTAGAGACGGGGTTTCACCATATTGGCCAAGCTGGTCTCGA GTAGAGACGGGGTTTCACCATGTTGGCCAAGCTGGTCTCGA < 41bp 0.81925477645977 0.480089933357272 0.30071333 0.19503623 prediction 0.63850955291954 Functional Loss - CYTH2 ENSG00000269751 ncRNA_exonic Human other chr19:48984971 chr19:48984972 . . 0 22 hPsi_associated_SNPs_5859 0 0 1 0 0 Ribosome 0.438705372745537 0.438746681166507 0 0 hPsi_site_11276 iPseU_CNN:0;iRNA_PseU:0 11277 chrX 151092922 151092922 1 + A G rs758722494 151092921 + 151092901 151092941 41 CTACCTGGAGTACCGGCAGGTACCCGGCAGTAATCCTGCGC CTACCTGGAGTACCGGCAGGTGCCCGGCAGTAATCCTGCGC < 41bp 0.819250092848796 0.403167126569766 0.69324344 0.17028058 prediction 0.638500185697592 Functional Loss - MAGEA4 ENSG00000147381 CDS Human protein_coding chrX:151092921 chrX:151092922 synonymous SNV . 0 22 hPsi_associated_SNPs_5860 0 0 0 0 0 unknown 0.438718593182303 0.438718593140359 0.38648688 0 hPsi_site_11277 iPseU_CNN:0.38648688;iRNA_PseU:0 11278 chr11 55406045 55406045 1 + A G LUSC 55406044 + 55406024 55406064 41 TCTCACTCTCCGACCTTTGCTACACATCCACAGTGACCCCC TCTCACTCTCCGACCTTTGCTGCACATCCACAGTGACCCCC < 41bp 0.886313327420814 0.567104427325871 0.24887565 0.21877494 prediction 0.638417800189886 Functional Loss - OR4P4 ENSG00000181927 CDS Human protein_coding chr11:55406044 chr11:55406045 nonsynonymous SNV 0.056 1 22 hPsi_associated_SNPs_5861 0 0 0 0 0 unknown 0.438653826600808 0.438708388955554 0 0 hPsi_site_11278 iPseU_CNN:0;iRNA_PseU:0 11279 chr20 35207311 35207311 1 + A G UCEC 35207310 + 35207290 35207330 41 ACTTGCACCGCTACAACGCCTACCCCTCAGAGCAGGAGAAG ACTTGCACCGCTACAACGCCTGCCCCTCAGAGCAGGAGAAG < 41bp 0.819203714726935 0.394706777340534 0.37051448 0.12059295 prediction 0.638407429453871 Functional Loss - TGIF2;TGIF2-C20orf24 ENSG00000118707;ENSG00000259399 CDS Human other chr20:35207310 chr20:35207311 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5862 0 0 1 0 1 unknown 0.438620376933642 0.438709166073577 0 0 hPsi_site_11279 iPseU_CNN:0;iRNA_PseU:0 11280 chr9 37740854 37740854 1 + A G HNSC 37740853 + 37740833 37740873 41 GAATACTATGACGCGGCTGATAAGCTCACTCCCCCAGGCCC GAATACTATGACGCGGCTGATGAGCTCACTCCCCCAGGCCC < 41bp 0.819192324972142 0.394872860375687 0.72166145 0.3225771 prediction 0.638384649944284 Functional Loss - FRMPD1 ENSG00000070601 CDS Human protein_coding chr9:37740853 chr9:37740854 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_5863 0 0 0 0 1 exosome 0.438809041366614 0.438215506169529 0.4433229 0 hPsi_site_11280 iPseU_CNN:0.4433229;iRNA_PseU:0 11281 chr22 21345987 21345987 1 + A G LUSC 21345986 + 21345966 21346006 41 CCGCAGCGGCGCTACGGGCATACCATGGTGGCCTTTGACCG CCGCAGCGGCGCTACGGGCATGCCATGGTGGCCTTTGACCG < 41bp 0.819183111335029 0.39391348469971 0.69668955 0.26095438 prediction 0.638366222670057 Functional Loss - LZTR1 ENSG00000099949 CDS Human protein_coding chr22:21345986 chr22:21345987 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_5864 0 0 1 0 1 Nucleus 0.438718594828391 0.438718691205043 0.3933791 0 hPsi_site_11281 iPseU_CNN:0.3933791;iRNA_PseU:0 11282 chr10 89717716 89717716 1 + A C LUSC 89717715 + 89717695 89717735 41 CTTTGAGTTCCCTCAGCCGTTACCTGTGTGTGGTGATATCA CTTTGAGTTCCCTCAGCCGTTCCCTGTGTGTGGTGATATCA < 41bp 0.868868370107129 0.549707411697879 0.51168543 0.23668995 prediction 0.638321916818501 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717715 chr10:89717716 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_5865 0 0 0 0 1 Ribosome 0.440419581216071 0.449711057869242 0.02337086 0 hPsi_site_11282 iPseU_CNN:0.02337086;iRNA_PseU:0 11283 chr7 45931643 45931643 1 + T G UCEC 45931642 + 45931622 45931662 41 CAAACTGCAACAAGAATGGATTTTATCACAGCAGACAGGTA CAAACTGCAACAAGAATGGATGTTATCACAGCAGACAGGTA < 41bp 0.828237441665226 0.50908008250069 0.29654476 0.26042128 prediction 0.638314718329071 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45931642 chr7:45931643 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_5866 0 0 1 0 1 nucleus 0.438758878319214 0.438739880347942 0 0 hPsi_site_11283 iPseU_CNN:0;iRNA_PseU:0 11284 chr15 59500147 59500147 1 + A G COAD 59500146 + 59500126 59500166 41 CTATGGAATAGATGAAGAAGTATTCCTCAGTATTCCTTGTA CTATGGAATAGATGAAGAAGTGTTCCTCAGTATTCCTTGTA < 41bp 0.819157306258993 0.435543220728545 0.52326536 0.29632372 prediction 0.638314612517985 Functional Loss - LDHAL6B ENSG00000171989 CDS Human protein_coding chr15:59500146 chr15:59500147 synonymous SNV . 0 22 hPsi_associated_SNPs_5867 0 0 0 0 0 unknown 0.43833119641385 0.438042030770272 0.04653072 0 hPsi_site_11284 iPseU_CNN:0.04653072;iRNA_PseU:0 Breast-ovarian cancer, familial 2 Breast-ovarian cancer, familial 2 11285 chr2 183621135 183621135 1 + T G COAD 183621134 + 183621114 183621154 41 ACGAAGTCTGGATGGTTGATTTCTATTCTCCGTGGTGTCAT ACGAAGTCTGGATGGTTGATTGCTATTCTCCGTGGTGTCAT < 41bp 0.824578050926148 0.505444068504606 0.6888657 0.34073073 prediction 0.638267964843083 Functional Loss - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183621134 chr2:183621135 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5868 0 0 1 1 2 Ribosome 0.438702533237543 0.438437822625302 0.3777314 0 hPsi_site_11285 iPseU_CNN:0.3777314;iRNA_PseU:0 11286 chr9 139750507 139750507 1 + A G UCEC 139750506 + 139750486 139750526 41 GCAGCGGGCCTGGGGGCAGCTAGGCGCTGAGGCCCGGGTCC GCAGCGGGCCTGGGGGCAGCTGGGCGCTGAGGCCCGGGTCC < 41bp 0.829491429899424 0.510361520173234 0.4362425 0.16964203 prediction 0.638259819452381 Functional Loss - MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139750506 chr9:139750507 synonymous SNV . 0 22 hPsi_associated_SNPs_5869 0 0 1 0 2 chromatin 0.438718592902269 0.438718664765765 0 0 hPsi_site_11286 iPseU_CNN:0;iRNA_PseU:0 11287 chr1 154221772 154221772 1 + A G UCEC 154221771 + 154221751 154221791 41 GAAGCTAAAGGCGGCAGTACTACAGGCTCCCAGTTCTTGGA GAAGCTAAAGGCGGCAGTACTGCAGGCTCCCAGTTCTTGGA < 41bp 0.907506114140925 0.588380997612036 0.6399145 0.33805317 prediction 0.638250233057778 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154221771 chr1:154221772 nonsynonymous SNV 0.974 3 22 hPsi_associated_SNPs_5870 0 0 1 0 1 Nucleus 0.438706948669358 0.438718572845549 0.279829 0 hPsi_site_11287 iPseU_CNN:0.279829;iRNA_PseU:0 11288 chr18 30093472 30093472 1 + A G HNSC 30093471 + 30093451 30093491 41 CAGCGATCCAAGGTAGATAATACAAGTGCAGCCACCGTTGA CAGCGATCCAAGGTAGATAATGCAAGTGCAGCCACCGTTGA < 41bp 0.819122798243285 0.454971992439856 0.5343071 0.29601482 prediction 0.63824559648657 Functional Loss - WBP11P1 ENSG00000260389 ncRNA_exonic Human transcribed_processed_pseudogene chr18:30093471 chr18:30093472 . . 0 22 hPsi_associated_SNPs_5871 0 0 0 0 0 unknown 0.438525512350341 0.438715611067655 0.0686142000000001 0 hPsi_site_11288 iPseU_CNN:0.0686142000000001;iRNA_PseU:0 11289 chr20 62293780 62293780 1 + A G rs556735647 62293779 + 62293759 62293799 41 CGCCCGGGCCACGTTTCAGTTATGCTCACTTCCTCTGACCG CGCCCGGGCCACGTTTCAGTTGTGCTCACTTCCTCTGACCG < 41bp 0.898824201756783 0.579729727661039 0.89031845 0.27531222 prediction 0.638188948191488 Functional Loss - RTEL1-TNFRSF6B ENSG00000258366 CDS Human protein_coding chr20:62293779 chr20:62293780 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5872 0 0 0 0 1 exosome 0.440029678136364 0.447029654826193 0.7806369 0 hPsi_site_11289 iPseU_CNN:0.7806369;iRNA_PseU:0 11290 chr11 5664810 5664810 1 + T G COAD 5664809 + 5664789 5664829 41 TGAAGCAGGCATTGTCTCATTTTTCAATGTCACAAGCCATG TGAAGCAGGCATTGTCTCATTGTTCAATGTCACAAGCCATG < 41bp 0.829593844318135 0.510505907415133 0.4623892 0.34680253 prediction 0.638175873806005 Functional Loss - TRIM34;TRIM6-TRIM34 ENSG00000258588;ENSG00000258659 CDS Human other chr11:5664809 chr11:5664810 nonsynonymous SNV 0.719 4 22 hPsi_associated_SNPs_5873 0 0 0 0 0 unknown 0.432851652641422 0.438426245358091 0 0 hPsi_site_11290 iPseU_CNN:0;iRNA_PseU:0 11291 chr1 151090497 151090497 1 + A G COAD 151090496 + 151090476 151090516 41 CCAATCGAAGAGCCCAGGAATACCGACACCAGCTCCTAAAG CCAATCGAAGAGCCCAGGAATGCCGACACCAGCTCCTAAAG < 41bp 0.901603650604817 0.582560885420665 0.6134895 0.32590568 prediction 0.638085530368302 Functional Loss - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151090496 chr1:151090497 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5874 0 0 0 0 1 chromatin 0.438718499722194 0.438717917176109 0.226979 0 hPsi_site_11291 iPseU_CNN:0.226979;iRNA_PseU:0 11292 chr16 26147235 26147235 1 + A G SKCM 26147234 + 26147214 26147254 41 ATCTGGAAAACTGGCTCCAGTATTTCCCCCTCTCCCAGATC ATCTGGAAAACTGGCTCCAGTGTTTCCCCCTCTCCCAGATC < 41bp 0.886184909898341 0.56716639215681 0.7393852 0.41081977 prediction 0.638037035483062 Functional Loss - HS3ST4 ENSG00000182601 CDS Human protein_coding chr16:26147234 chr16:26147235 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_5875 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.4787704 0 hPsi_site_11292 iPseU_CNN:0.4787704;iRNA_PseU:0 11293 chr12 54369172 54369172 1 + A C UCEC 54369171 + 54369151 54369191 41 TGAGCAGAGACCGGCTGCAGTATTTCTCGGGAAATCCTCTG TGAGCAGAGACCGGCTGCAGTCTTTCTCGGGAAATCCTCTG < 41bp 0.818987154615226 0.460019997074871 0.33200625 0.21756986 prediction 0.637974309230452 Functional Loss - HOXC11 ENSG00000123388 CDS Human protein_coding chr12:54369171 chr12:54369172 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5876 0 0 1 0 0 exosome 0.438718592997337 0.438718592995713 0 0 hPsi_site_11293 iPseU_CNN:0;iRNA_PseU:0 11294 chr5 147041386 147041386 1 + A G rs148798650 147041385 + 147041365 147041405 41 ACAAATCCCCATGTGATTGGTATACGCCTTAAAATTAGAAA ACAAATCCCCATGTGATTGGTGTACGCCTTAAAATTAGAAA < 41bp 0.825575791617799 0.506594656451989 0.63403803 0.31194186 prediction 0.637962270331621 Functional Loss - JAKMIP2-AS1 ENSG00000176049 intronic Human protein_coding chr5:147041385 chr5:147041386 . . 0 22 hPsi_associated_SNPs_5877 0 0 0 1 0 unknown 0.438718592960244 0.438718592948604 0.26807606 0 hPsi_site_11294 iPseU_CNN:0.26807606;iRNA_PseU:0 Early-Onset Familial Alzheimer Disease Early-Onset Familial Alzheimer Disease 11295 chr1 215775237 215775237 1 + A G HNSC 215775236 + 215775216 215775256 41 ATGTTGTTCCTATAACTAGTTATGACACTGCTGGATCATTC ATGTTGTTCCTATAACTAGTTGTGACACTGCTGGATCATTC < 41bp 0.818975064149137 0.40909223893681 0.34510607 0.23400521 prediction 0.637950128298274 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215775236 chr1:215775237 nonsynonymous SNV 0.954 1 22 hPsi_associated_SNPs_5878 0 0 1 0 2 Ribosome 4.41849125082642e-06 0.130300706121099 0 0 hPsi_site_11295 iPseU_CNN:0;iRNA_PseU:0 11296 chr21 42824649 42824649 1 + A G rs145083364 42824648 + 42824628 42824668 41 TGTCTACTGCCAGGACCAGGTATACAGGGGTGCATTGCAGA TGTCTACTGCCAGGACCAGGTGTACAGGGGTGCATTGCAGA < 41bp 0.81897028143765 0.393274344946328 0.68338406 0.60226125 prediction 0.6379405628753 Functional Loss - MX1 ENSG00000157601 CDS Human protein_coding chr21:42824648 chr21:42824649 synonymous SNV . 0 22 hPsi_associated_SNPs_5879 0 0 0 0 0 exosome 0.444584008986256 0.442919984049669 0.16224562 0 hPsi_site_11296 iPseU_CNN:0.16224562;iRNA_PseU:0 11297 chr10 115338510 115338510 1 + T G UCEC 115338509 + 115338489 115338529 41 GCAGGAGAATTACAACATGTTTATGGAGGATGCTGAAACCC GCAGGAGAATTACAACATGTTGATGGAGGATGCTGAAACCC < 41bp 0.829943309575565 0.51097333222066 0.69284046 0.19282526 prediction 0.63793995470981 Functional Loss - HABP2 ENSG00000148702 CDS Human protein_coding chr10:115338509 chr10:115338510 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_5880 0 0 0 0 0 exosome 0.438718131190903 0.438717906094754 0.38568092 0 hPsi_site_11297 iPseU_CNN:0.38568092;iRNA_PseU:0 11298 chr2 103063602 103063602 1 + A G HNSC 103063601 + 103063581 103063621 41 TGGCGGCGAGTGCCCTCCTCTACAGGCACTGGATTGAAATA TGGCGGCGAGTGCCCTCCTCTGCAGGCACTGGATTGAAATA < 41bp 0.818963686325993 0.418560524940638 0.39249086 0.32301587 prediction 0.637927372651985 Functional Loss - IL18RAP ENSG00000115607 CDS Human protein_coding chr2:103063601 chr2:103063602 nonsynonymous SNV 0.115 0 22 hPsi_associated_SNPs_5881 0 0 0 0 2 chromatin 0.438718594286264 0.438718598427452 0 0 hPsi_site_11298 iPseU_CNN:0;iRNA_PseU:0 11299 chr17 57290140 57290140 1 + A G UCEC 57290139 + 57290119 57290159 41 GGATCATATCAATTTCCCAGTATTTGAACCAAGTACTCCAG GGATCATATCAATTTCCCAGTGTTTGAACCAAGTACTCCAG < 41bp 0.818960352689425 0.414000165877544 0.38378987 0.18501648 prediction 0.63792070537885 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57290139 chr17:57290140 synonymous SNV . 0 22 hPsi_associated_SNPs_5882 0 0 1 0 1 chromatin 0.438718590362782 0.438718539056583 0 0 hPsi_site_11299 iPseU_CNN:0;iRNA_PseU:0 11300 chr6 79655810 79655810 1 + A G LGG 79655809 + 79655789 79655829 41 TGCTCAGTGACAACTGGATCTACAACCACTCGGTTGCTTCT TGCTCAGTGACAACTGGATCTGCAACCACTCGGTTGCTTCT < 41bp 0.899194652875198 0.580239445064425 0.7734015 0.472764 prediction 0.637910415621547 Functional Loss - PHIP ENSG00000146247 CDS Human protein_coding chr6:79655809 chr6:79655810 nonsynonymous SNV 0.904 0 22 hPsi_associated_SNPs_5883 0 0 0 1 0 Nucleus 0.439636902760417 0.437564533010677 0.546803 0 hPsi_site_11300 iPseU_CNN:0.546803;iRNA_PseU:0 11301 chr11 66009076 66009076 1 + T G UCEC 66009075 + 66009055 66009095 41 CATAGTGGGGAGGCCCAGCTTTCTGGCACCATGGCCATGAC CATAGTGGGGAGGCCCAGCTTGCTGGCACCATGGCCATGAC < 41bp 0.844205667337762 0.525258570837294 0.54445624 0.29206115 prediction 0.637894193000937 Functional Loss - PACS1 ENSG00000175115 CDS Human protein_coding chr11:66009075 chr11:66009076 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5884 0 0 0 0 1 Cytosol 0.438612242091714 0.438769649037351 0.0889124800000001 0 hPsi_site_11301 iPseU_CNN:0.0889124800000001;iRNA_PseU:0 11302 chr5 140432869 140432869 1 + A G OV 140432868 + 140432848 140432888 41 GTCAGAATTCTTGGCTTTCATATCATCTACTTAAGGCCACT GTCAGAATTCTTGGCTTTCATGTCATCTACTTAAGGCCACT < 41bp 0.818931151887794 0.430274163820851 0.25318307 0.18475813 prediction 0.637862303775589 Functional Loss - PCDHB1 ENSG00000171815 CDS Human protein_coding chr5:140432868 chr5:140432869 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5885 0 0 0 0 0 unknown 0.438727887321039 0.438729169086148 0 0 hPsi_site_11302 iPseU_CNN:0;iRNA_PseU:0 11303 chrX 23804218 23804218 1 + A G rs2071030 23804217 + 23804197 23804237 41 ACAAGGTGGTGTGATCTTAATATATTTGAAAAAAACTTCAT ACAAGGTGGTGTGATCTTAATGTATTTGAAAAAAACTTCAT < 41bp 0.87883371303484 0.559906538686613 0.4340418 0.32259437 prediction 0.637854348696455 Functional Loss - SAT1 ENSG00000130066 UTR3 Human protein_coding chrX:23804217 chrX:23804218 . . 0 22 hPsi_associated_SNPs_5886 0 0 1 3 0 Ribosome 0.43872316368319 0.438719035015067 0 0 hPsi_site_11303 iPseU_CNN:0;iRNA_PseU:0 11304 chr7 87027911 87027911 1 + T G UCEC 87027910 + 87027890 87027930 41 AAAAGCTAGTTCAGCTGACTTTTTGTGCTTTTCATGATATG AAAAGCTAGTTCAGCTGACTTGTTGTGCTTTTCATGATATG < 41bp 0.818926504131737 0.497407843800728 0.53171945 0.34948033 prediction 0.637853008263475 Functional Loss - CROT ENSG00000005469 CDS Human protein_coding chr7:87027910 chr7:87027911 nonsynonymous SNV 0.499 1 22 hPsi_associated_SNPs_5887 0 0 0 0 1 Nucleus 0.433486679324881 0.4382815796108 0.0634389 0 hPsi_site_11304 iPseU_CNN:0.0634389;iRNA_PseU:0 11305 chr11 60105365 60105365 1 + A C rs138903289 60105364 + 60105344 60105384 41 CAACCAGACTTCTTCTTTCTTATGATTATCATTCACCTTAC CAACCAGACTTCTTCTTTCTTCTGATTATCATTCACCTTAC < 41bp 0.818922601729913 0.464152045217718 0.37645465 0.30839205 prediction 0.637845203459826 Functional Loss - MS4A6E ENSG00000166926 CDS Human protein_coding chr11:60105364 chr11:60105365 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_5888 0 0 0 0 1 exosome 0.43871884238673 0.438718733576437 0 0 hPsi_site_11305 iPseU_CNN:0;iRNA_PseU:0 11306 chr2 219603313 219603313 1 + A G STAD 219603312 + 219603292 219603332 41 CCAGTGTTGCCTCTTCCTGGTATAACCGGAATAACTTAGCC CCAGTGTTGCCTCTTCCTGGTGTAACCGGAATAACTTAGCC < 41bp 0.909739423206557 0.590822492621726 0.8093781 0.26722366 prediction 0.637833861169663 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219603312 chr2:219603313 nonsynonymous SNV 0.241 0 22 hPsi_associated_SNPs_5889 0 0 1 0 0 Cytosol 0.438718592979073 0.438718370671448 0.6187562 0 hPsi_site_11306 iPseU_CNN:0.6187562;iRNA_PseU:0 11307 chr6 116580060 116580060 1 + A G rs73767703 116580059 + 116580039 116580079 41 GCCGTGCATCATCATGGAGTTAGTAAGGCGCTCCACAATGG GCCGTGCATCATCATGGAGTTGGTAAGGCGCTCCACAATGG < 41bp 0.818904250417426 0.420960236764267 0.3192729 0.14998141 prediction 0.637808500834852 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116580059 chr6:116580060 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_5890 0 0 1 0 1 nucleolus 0.438785822727251 0.43865992335736 0 0 hPsi_site_11307 iPseU_CNN:0;iRNA_PseU:0 11308 chr1 210267762 210267762 1 + A G UCS 210267761 + 210267741 210267781 41 GGTTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGA GGTTCTCCCCATCTGTCATGTGCACCCTCAGAAATTGGGGA < 41bp 0.818896899419306 0.404525785767502 0.567131 0.2765795 prediction 0.637793798838612 Functional Loss - SYT14 ENSG00000143469 CDS Human protein_coding chr1:210267761 chr1:210267762 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_5891 0 0 0 0 1 unknown 0.438718972594486 0.438718595871866 0.134262 0 hPsi_site_11308 iPseU_CNN:0.134262;iRNA_PseU:0 11309 chr1 158576881 158576881 1 + A G LUSC 158576880 + 158576860 158576900 41 TCTTCTTCATCACCATCTCCTACGCCTACATCTTGGCAGCA TCTTCTTCATCACCATCTCCTGCGCCTACATCTTGGCAGCA < 41bp 0.818894787557865 0.425942370375028 0.51902926 0.25530204 prediction 0.63778957511573 Functional Loss - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576880 chr1:158576881 nonsynonymous SNV 0.796 3 22 hPsi_associated_SNPs_5892 0 0 0 0 0 unknown 0.438748816284404 0.438723709108535 0.0380585200000001 0 hPsi_site_11309 iPseU_CNN:0.0380585200000001;iRNA_PseU:0 11310 chr14 70477542 70477542 1 + A G rs569514948 70477541 + 70477521 70477561 41 CAGCAGAATCCCCGTGAGGGTATTGTCATCCCTGAATGTGC CAGCAGAATCCCCGTGAGGGTGTTGTCATCCCTGAATGTGC < 41bp 0.818880498003096 0.384271430594399 0.7247608 0.32603654 prediction 0.637760996006193 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70477541 chr14:70477542 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_5893 0 0 1 0 1 cytosol 0.438810675473382 0.438831276108926 0.4495216 0 hPsi_site_11310 iPseU_CNN:0.4495216;iRNA_PseU:0 11311 chr7 100028894 100028894 1 + A C UCEC 100028893 + 100028873 100028913 41 GCAAGTTCCAGTATGGGAATTATTGCAAATACTATGGGTAC GCAAGTTCCAGTATGGGAATTCTTGCAAATACTATGGGTAC < 41bp 0.859508191518327 0.540641210183674 0.22892451 0.20161235 prediction 0.637733962669307 Functional Loss - MEPCE ENSG00000146834 CDS Human protein_coding chr7:100028893 chr7:100028894 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_5894 0 0 1 0 0 chromatin 0.439661391891355 0.438718596628843 0 0 hPsi_site_11311 iPseU_CNN:0;iRNA_PseU:0 11312 chr8 105361482 105361482 1 + T G GBM 105361481 + 105361461 105361501 41 TGGCCTCTTCATGAAGCGATTTTTGGGCCCTTGTGGTTGGA TGGCCTCTTCATGAAGCGATTGTTGGGCCCTTGTGGTTGGA < 41bp 0.818835159960873 0.497413899510953 0.7284161 0.64199716 prediction 0.637670319921747 Functional Loss - DCSTAMP ENSG00000164935 CDS Human protein_coding chr8:105361481 chr8:105361482 nonsynonymous SNV 0.968 1 22 hPsi_associated_SNPs_5895 0 0 0 0 0 exosome 0.439096670933557 0.439202081074955 0.17283788 0 hPsi_site_11312 iPseU_CNN:0.17283788;iRNA_PseU:0 11313 chr11 55607016 55607016 1 + A G LUAD 55607015 + 55606995 55607035 41 CATCCTCTTCCTCTACTGTGTACCCAACTCCAAAAACTCCA CATCCTCTTCCTCTACTGTGTGCCCAACTCCAAAAACTCCA < 41bp 0.885550017488757 0.566720142197315 0.6924784 0.3166495 prediction 0.637659750582882 Functional Loss - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55607015 chr11:55607016 synonymous SNV . 0 22 hPsi_associated_SNPs_5896 0 0 0 0 0 unknown 0.438718589621111 0.43871864511026 0.3849568 0 hPsi_site_11313 iPseU_CNN:0.3849568;iRNA_PseU:0 11314 chr5 115249134 115249134 1 + A G LUAD 115249133 + 115249113 115249153 41 CTTCCTGAGATCCCAAGAAATATTAACATTGGTGACATCAG CTTCCTGAGATCCCAAGAAATGTTAACATTGGTGACATCAG < 41bp 0.818822780398529 0.432736913533721 0.19375348 0.1494934 prediction 0.637645560797059 Functional Loss - AP3S1 ENSG00000177879 CDS Human protein_coding chr5:115249133 chr5:115249134 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5897 0 0 1 0 1 Ribosome 0.438718021289573 0.438717032428645 0 0 hPsi_site_11314 iPseU_CNN:0;iRNA_PseU:0 11315 chr9 5897599 5897599 1 + A G KIRC 5897598 + 5897578 5897618 41 GACAGTGATCCTGGGAGTCTTACTGCTCATCGGCTGTTGGT GACAGTGATCCTGGGAGTCTTGCTGCTCATCGGCTGTTGGT < 41bp 0.818820535704444 0.396114323031298 0.5408175 0.2389828 prediction 0.637641071408887 Functional Loss - MLANA ENSG00000120215 CDS Human protein_coding chr9:5897598 chr9:5897599 synonymous SNV . 0 22 hPsi_associated_SNPs_5898 0 0 0 0 2 Cytosol 0.438718752591185 0.438718593430511 0.0816349999999999 0 hPsi_site_11315 iPseU_CNN:0.0816349999999999;iRNA_PseU:0 11316 chr6 116758080 116758080 1 + A C LGG 116758079 + 116758059 116758099 41 CGAAGGGCAGGCAAACGCTATAAATTTGTGGATGCTGTCCC CGAAGGGCAGGCAAACGCTATCAATTTGTGGATGCTGTCCC < 41bp 0.818810905102267 0.460009728742788 0.30382133 0.29850024 prediction 0.637621810204534 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116758079 chr6:116758080 nonsynonymous SNV 0.985 2 22 hPsi_associated_SNPs_5899 0 0 1 0 0 nucleolus 0.438718593258819 0.438718592880545 0 0 hPsi_site_11316 iPseU_CNN:0;iRNA_PseU:0 11317 chr19 47259886 47259886 1 + A G rs145894568 47259885 + 47259865 47259905 41 GGTGGATGAGCGCGGCTTCGTATGGGAGAAGGCGGTCGAGG GGTGGATGAGCGCGGCTTCGTGTGGGAGAAGGCGGTCGAGG < 41bp 0.903445926189718 0.584636025264256 0.5185928 0.3068619 prediction 0.637619801850924 Functional Loss - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259885 chr19:47259886 synonymous SNV . 0 22 hPsi_associated_SNPs_5900 1 0 1 0 0 Nucleus 0.438728912782635 0.438697191860512 0.0371855999999999 0 hPsi_site_11317 iPseU_CNN:0.0371855999999999;iRNA_PseU:0 11318 chr11 56128058 56128058 1 + A G UCEC 56128057 + 56128037 56128077 41 GTTCTTTATTGTATCGGAGGTAATCATGCTGGCTTTGATGG GTTCTTTATTGTATCGGAGGTGATCATGCTGGCTTTGATGG < 41bp 0.818766555005648 0.428798819540959 0.40207118 0.24206424 prediction 0.637533110011295 Functional Loss - OR8J1 ENSG00000172487 CDS Human protein_coding chr11:56128057 chr11:56128058 synonymous SNV . 0 22 hPsi_associated_SNPs_5901 0 0 0 0 0 unknown 0.438718492514448 0.438704104320876 0 0 hPsi_site_11318 iPseU_CNN:0;iRNA_PseU:0 11319 chr6 44200121 44200121 1 + A G UCEC 44200120 + 44200100 44200140 41 TCCTGTTTCTTGACTTTCAATATCTTTGACTGGTTGGGCCG TCCTGTTTCTTGACTTTCAATGTCTTTGACTGGTTGGGCCG < 41bp 0.818749277404264 0.408343915995186 0.3910296 0.28216636 prediction 0.637498554808527 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44200120 chr6:44200121 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_5902 0 0 1 0 2 Endoplasmic reticulum 0.438718599704561 0.438718592210141 0 0 hPsi_site_11319 iPseU_CNN:0;iRNA_PseU:0 11320 chr11 111915913 111915913 1 + A G LUAD 111915912 + 111915892 111915932 41 CCTGGAATGGCACCAGTTCCTACAGGTGTCTTCACAGATAT CCTGGAATGGCACCAGTTCCTGCAGGTGTCTTCACAGATAT < 41bp 0.818737505592656 0.404994796328072 0.29692602 0.2863835 prediction 0.637475011185312 Functional Loss - DLAT ENSG00000150768 CDS Human protein_coding chr11:111915912 chr11:111915913 nonsynonymous SNV 0.601 0 22 hPsi_associated_SNPs_5903 0 0 1 0 2 Cytosol 0.438718570040235 0.43871856869664 0 0 hPsi_site_11320 iPseU_CNN:0;iRNA_PseU:0 11321 chr2 172926339 172926339 1 + A G LUAD 172926338 + 172926318 172926358 41 CAAAGAGATATTTCACACAGTATAGTTTTGCCGGCTGCAGT CAAAGAGATATTTCACACAGTGTAGTTTTGCCGGCTGCAGT < 41bp 0.818710663594223 0.442700557145133 0.47527507 0.33372936 prediction 0.637421327188445 Functional Loss - METAP1D ENSG00000172878 CDS Human protein_coding chr2:172926338 chr2:172926339 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_5904 0 0 1 0 1 chromatin 0.438725010826506 0.438718140022253 0 0 hPsi_site_11321 iPseU_CNN:0;iRNA_PseU:0 11322 chr19 32844500 32844500 1 + A G HNSC 32844499 + 32844479 32844519 41 ATCGATGCTTGTTTTGTAGTTATACTTGTGGCCAGCAGAGA ATCGATGCTTGTTTTGTAGTTGTACTTGTGGCCAGCAGAGA < 41bp 0.897817792944614 0.579132210388687 0.6473273 0.3238573 prediction 0.637371165111854 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32844499 chr19:32844500 nonsynonymous SNV 0.958 4 22 hPsi_associated_SNPs_5905 0 0 1 0 0 Cytosol 0.438718291840997 0.438721333771399 0.2946546 0 hPsi_site_11322 iPseU_CNN:0.2946546;iRNA_PseU:0 11323 chr6 35438521 35438521 1 + A G HNSC 35438520 + 35438500 35438540 41 CATGGGCAAGCCCCAGCGCCTATATTAAGGCACATTTGAAT CATGGGCAAGCCCCAGCGCCTGTATTAAGGCACATTTGAAT < 41bp 0.818673990708585 0.421972985066667 0.33240503 0.2460925 prediction 0.637347981417171 Functional Loss - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438520 chr6:35438521 synonymous SNV . 0 22 hPsi_associated_SNPs_5906 0 0 1 0 0 Cytosol 0.438716930762847 0.438718589438502 0 0 hPsi_site_11323 iPseU_CNN:0;iRNA_PseU:0 11324 chr2 209190110 209190110 1 + A G rs148158089 209190109 + 209190089 209190129 41 GTTAAGGAGATCCTAATATTTATGATCTGTGTTGCTTATCA GTTAAGGAGATCCTAATATTTGTGATCTGTGTTGCTTATCA < 41bp 0.818613729152526 0.422217932948975 0.5881021 0.3529161 prediction 0.637227458305052 Functional Loss - PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209190109 chr2:209190110 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5907 0 0 1 0 0 Nucleus 0.438720268622395 0.438722289325983 0.1762042 0 hPsi_site_11324 iPseU_CNN:0.1762042;iRNA_PseU:0 11325 chr19 34884940 34884940 1 + A G UCEC 34884939 + 34884919 34884959 41 CCATGCTGCCCTATGACCAGTACCTGCACCGCTTTGCTGCG CCATGCTGCCCTATGACCAGTGCCTGCACCGCTTTGCTGCG < 41bp 0.908675097069845 0.590063172430402 0.37640083 0.20498958 prediction 0.637223849278885 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34884939 chr19:34884940 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_5908 0 0 1 0 1 Ribosome 0.438718647541075 0.438717842472857 0 0 hPsi_site_11325 iPseU_CNN:0;iRNA_PseU:0 11326 chrX 150912810 150912810 1 + A G STAD 150912809 + 150912789 150912829 41 AGACCAACATGGAAACCTTGTACACTCGCTTTGGCCGCCTG AGACCAACATGGAAACCTTGTGCACTCGCTTTGGCCGCCTG < 41bp 0.903399188185898 0.584812912310115 0.8234869 0.48829967 prediction 0.637172551751565 Functional Loss - CNGA2 ENSG00000183862 CDS Human protein_coding chrX:150912809 chrX:150912810 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_5909 0 0 0 0 0 unknown 0.438701598763366 0.432505289899449 0.6469738 0 hPsi_site_11326 iPseU_CNN:0.6469738;iRNA_PseU:0 11327 chr11 114121168 114121168 1 + A G SKCM 114121167 + 114121147 114121187 41 AGTGCACCATCTGCACAGAGTACTGCCCCAGCCTCTCCTCC AGTGCACCATCTGCACAGAGTGCTGCCCCAGCCTCTCCTCC < 41bp 0.895368664722675 0.576795229460967 0.6760704 0.32816055 prediction 0.637146870523416 Functional Loss - ZBTB16 ENSG00000109906 CDS Human protein_coding chr11:114121167 chr11:114121168 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5910 0 0 0 0 0 Nucleus 0.438730554261538 0.438717543736409 0.3521408 0 hPsi_site_11327 iPseU_CNN:0.3521408;iRNA_PseU:0 11328 chr11 119206097 119206097 1 + A G GBM 119206096 + 119206076 119206116 41 GCCTTGTGTACTCTGCTGTATAGCTGCTGCTCTGGCCTAGA GCCTTGTGTACTCTGCTGTATGGCTGCTGCTCTGGCCTAGA < 41bp 0.896650320823762 0.578081116976905 0.4460239 0.26460195 prediction 0.637138407693715 Functional Loss - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206096 chr11:119206097 nonsynonymous SNV 0.899 1 22 hPsi_associated_SNPs_5911 0 0 1 0 0 chromatin 0.438719560990781 0.438716853761904 0 0 hPsi_site_11328 iPseU_CNN:0;iRNA_PseU:0 11329 chr8 145745721 145745721 1 + A G LUSC 145745720 + 145745700 145745740 41 GTGGGACTGTACTGCTGCCGTAGCTCGCACATGCATTGCCC GTGGGACTGTACTGCTGCCGTGGCTCGCACATGCATTGCCC < 41bp 0.818550891491075 0.401722060734406 0.62440705 0.24999067 prediction 0.63710178298215 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745720 chr8:145745721 synonymous SNV . 0 22 hPsi_associated_SNPs_5912 0 0 0 0 1 chromatin 0.439747523849231 0.438779094234556 0.2488141 0 hPsi_site_11329 iPseU_CNN:0.2488141;iRNA_PseU:0 11330 chr19 44470618 44470618 1 + A C KIRC 44470617 + 44470597 44470637 41 TGTGGTAAGAGCTTCCGTGTTAGATCAAGACTTAATAGGCA TGTGGTAAGAGCTTCCGTGTTCGATCAAGACTTAATAGGCA < 41bp 0.867450616960725 0.548915631941976 0.76368225 0.6279132 prediction 0.637069970037498 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470617 chr19:44470618 synonymous SNV . 0 22 hPsi_associated_SNPs_5913 0 0 1 0 0 exosome 0.438731283164351 0.438728105296878 0.2715381 0 hPsi_site_11330 iPseU_CNN:0.2715381;iRNA_PseU:0 11331 chr11 5067984 5067984 1 + A G rs2500016 5067983 + 5067963 5068003 41 ACTATTGATTTGGCCCTTTCTACAACCTCTGTGCCTCGCAT ACTATTGATTTGGCCCTTTCTGCAACCTCTGTGCCTCGCAT < 41bp 0.884415918337492 0.565917420711027 0.7598598 0.38718516 prediction 0.63699699525293 Functional Loss - OR52J3 ENSG00000205495 CDS Human protein_coding chr11:5067983 chr11:5067984 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5914 0 0 0 0 0 unknown 0.438718593896776 0.438718593062685 0.5197196 0 hPsi_site_11331 iPseU_CNN:0.5197196;iRNA_PseU:0 11332 chr5 74066480 74066480 1 + A G UCEC 74066479 + 74066459 74066499 41 AAATGGGAAGTCCCTCTGCCTAAAGTACGTGCCCAGGGAGA AAATGGGAAGTCCCTCTGCCTGAAGTACGTGCCCAGGGAGA < 41bp 0.818488984992836 0.417273652043973 0.27114838 0.19622603 prediction 0.636977969985671 Functional Loss - NSA2 ENSG00000164346 CDS Human protein_coding chr5:74066479 chr5:74066480 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5915 0 0 1 0 1 Cytosol 0.438718592995125 0.438718593028065 0 0 hPsi_site_11332 iPseU_CNN:0;iRNA_PseU:0 11333 chr19 58153331 58153331 1 + A G CESC 58153330 + 58153310 58153350 41 TGTAGCAAATCCTTTAGCTGTAAATCTAACCTCATTAAACA TGTAGCAAATCCTTTAGCTGTGAATCTAACCTCATTAAACA < 41bp 0.895104175552385 0.576620625800836 0.7739882 0.50491196 prediction 0.636967099503098 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58153330 chr19:58153331 nonsynonymous SNV 0.409 3 22 hPsi_associated_SNPs_5916 0 0 1 0 0 cytosol 0.438647612766564 0.438717332523303 0.53815248 0 hPsi_site_11333 iPseU_CNN:0.53815248;iRNA_PseU:0 11334 chr1 101186071 101186071 1 + A C SKCM 101186070 + 101186050 101186090 41 AGACCACCCCAGAATCTAGATATCTTGCTCAGATTGGTGAC AGACCACCCCAGAATCTAGATCTCTTGCTCAGATTGGTGAC < 41bp 0.863237589041757 0.544797847169571 0.3644417 0.3266271 prediction 0.636879483744372 Functional Loss - VCAM1 ENSG00000162692 CDS Human protein_coding chr1:101186070 chr1:101186071 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5917 0 0 0 0 2 exosome 0.438718560055538 0.438718599038877 0 0 hPsi_site_11334 iPseU_CNN:0;iRNA_PseU:0 11335 chr1 150293957 150293957 1 + A G rs3767630 150293956 + 150293936 150293976 41 CGTGGCGGCGGCGGTGGCGGTAGCGACGGCACGCCGTAGGG CGTGGCGGCGGCGGTGGCGGTGGCGACGGCACGCCGTAGGG < 41bp 0.835165228779896 0.51676631381227 0.80093294 0.28950542 prediction 0.636797829935251 Functional Loss - PRPF3 ENSG00000117360 UTR5 Human protein_coding chr1:150293956 chr1:150293957 . . 0 22 hPsi_associated_SNPs_5918 1 0 0 0 1 Nucleus 0.438718577131776 0.438718527482464 0.60186588 0 hPsi_site_11335 iPseU_CNN:0.60186588;iRNA_PseU:0 11336 chr6 139018414 139018414 1 + A G rs537664034 139018413 + 139018393 139018433 41 CCCTGTCCAAATAAATCCTCTAAAGCCCTCTTCCATCTGCA CCCTGTCCAAATAAATCCTCTGAAGCCCTCTTCCATCTGCA < 41bp 0.818377801825896 0.454894923009712 0.5197059 0.33300847 prediction 0.636755603651791 Functional Loss - FLJ46906 ENSG00000225177 ncRNA_exonic Human antisense chr6:139018413 chr6:139018414 . . 0 22 hPsi_associated_SNPs_5919 0 0 1 0 0 unknown 0.438718584846726 0.438718593005927 0.0394118000000001 0 hPsi_site_11336 iPseU_CNN:0.0394118000000001;iRNA_PseU:0 11337 chr15 45454041 45454041 1 + T G HNSC 45454040 + 45454020 45454060 41 GGACCACCGAGTACCACCCCTTCACACTGACCTCTGCGCCC GGACCACCGAGTACCACCCCTGCACACTGACCTCTGCGCCC < 41bp 0.818368914377035 0.468031045759333 0.32754946 0.24578601 prediction 0.63673782875407 Functional Loss - DUOX1 ENSG00000137857 CDS Human protein_coding chr15:45454040 chr15:45454041 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5920 0 0 0 0 0 chromatin 0.438637740732813 0.438703963942557 0 0 hPsi_site_11337 iPseU_CNN:0;iRNA_PseU:0 11338 chr2 38958941 38958941 1 + T G UCEC 38958940 + 38958920 38958960 41 ACCCAGCCCGGGGTCCAGTTTTACACGGGCAACTTCCTGGA ACCCAGCCCGGGGTCCAGTTTGACACGGGCAACTTCCTGGA < 41bp 0.818329219783692 0.490667686869176 0.8107591 0.4373805 prediction 0.636658439567383 Functional Loss - GALM ENSG00000143891 CDS Human protein_coding chr2:38958940 chr2:38958941 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5921 0 0 1 0 0 Ribosome 0.438718593002456 0.438718601644258 0.6215182 0 hPsi_site_11338 iPseU_CNN:0.6215182;iRNA_PseU:0 11339 chr9 113563094 113563094 1 + T G UCEC 113563093 + 113563073 113563113 41 GATGGCCCATGAGGAGGTCATTTACTACGTGCGAGATGGCA GATGGCCCATGAGGAGGTCATGTACTACGTGCGAGATGGCA < 41bp 0.82824710032578 0.509920403321106 0.40572506 0.34886408 prediction 0.636653394009348 Functional Loss - MUSK ENSG00000030304 CDS Human protein_coding chr9:113563093 chr9:113563094 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_5922 0 0 0 0 0 exosome 0.438675446738626 0.438734511092775 0 0 hPsi_site_11339 iPseU_CNN:0;iRNA_PseU:0 11340 chr15 80762609 80762609 1 + A G LUSC 80762608 + 80762588 80762628 41 GACGGAACAAGATGACTCAGTACATCACGGAGCTCTCCGAC GACGGAACAAGATGACTCAGTGCATCACGGAGCTCTCCGAC < 41bp 0.818325401921287 0.386227873867741 0.7182936 0.44155443 prediction 0.636650803842574 Functional Loss - ARNT2 ENSG00000172379 CDS Human protein_coding chr15:80762608 chr15:80762609 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_5923 0 0 0 0 1 Cytosol 0.438691265778827 0.436334206391 0.4365872 0 hPsi_site_11340 iPseU_CNN:0.4365872;iRNA_PseU:0 11341 chr14 24884857 24884857 1 + T G COAD 24884856 + 24884836 24884876 41 TCTTCCAGGTTCTGCCGCCTTTCTCTGACCTGTCCACGTTC TCTTCCAGGTTCTGCCGCCTTGCTCTGACCTGTCCACGTTC < 41bp 0.818310387584763 0.497238019232296 0.6502913 0.33925548 prediction 0.636620775169526 Functional Loss - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884856 chr14:24884857 nonsynonymous SNV 0.922 2 22 hPsi_associated_SNPs_5924 0 0 0 0 0 Exosome 0.438717574658765 0.438717500128164 0.3005826 0 hPsi_site_11341 iPseU_CNN:0.3005826;iRNA_PseU:0 11342 chr3 128759291 128759291 1 + A C rs533771365 128759290 + 128759270 128759310 41 ACAGGTAGGATTTAGACAGGTAAAGAAAGGAGGGAAGGGCA ACAGGTAGGATTTAGACAGGTCAAGAAAGGAGGGAAGGGCA < 41bp 0.818289009358329 0.488156979222042 0.65702665 0.32263345 prediction 0.636578018716659 Functional Loss - EFCC1 ENSG00000114654 UTR3 Human protein_coding chr3:128759290 chr3:128759291 . . 0 22 hPsi_associated_SNPs_5925 0 0 0 1 0 exosome 0.438718593045741 0.438718592597742 0.3140533 0 hPsi_site_11342 iPseU_CNN:0.3140533;iRNA_PseU:0 11343 chr15 71184963 71184963 1 + A C rs116181700 71184962 + 71184942 71184982 41 GGCCAGCCTCTTCCCCAGCTTATCCTCCTCCCAATACTCCC GGCCAGCCTCTTCCCCAGCTTCTCCTCCTCCCAATACTCCC < 41bp 0.851782682374008 0.533525663093404 0.3995863 0.2971478 prediction 0.636514038561208 Functional Loss - LRRC49 ENSG00000129028;ENSG00000137821 UTR5 Human other chr15:71184962 chr15:71184963 . . 0 22 hPsi_associated_SNPs_5926 0 0 1 0 0 nucleus 0.438729760576953 0.438718592994957 0 0 hPsi_site_11343 iPseU_CNN:0;iRNA_PseU:0 11344 chr17 74465319 74465319 1 + A G COAD 74465318 + 74465298 74465338 41 GATCCGGCACTTCCTGACCCTATGTCCAGAGCTGTCCCTGG GATCCGGCACTTCCTGACCCTGTGTCCAGAGCTGTCCCTGG < 41bp 0.818244216219429 0.386517848242475 0.43258527 0.23223543 prediction 0.636488432438859 Functional Loss - AANAT ENSG00000129673 CDS Human protein_coding chr17:74465318 chr17:74465319 synonymous SNV . 0 22 hPsi_associated_SNPs_5927 0 0 0 0 2 exosome 0.440157117751873 0.438854204413806 0 0 hPsi_site_11344 iPseU_CNN:0;iRNA_PseU:0 11345 chr3 47284680 47284680 1 + A G GBM 47284679 + 47284659 47284699 41 GGGTCTTGGAGGTGGAAACGTAATCCAAGTCCTTCCCATTC GGGTCTTGGAGGTGGAAACGTGATCCAAGTCCTTCCCATTC < 41bp 0.818202445345054 0.400607148150913 0.62337554 0.34678048 prediction 0.636404890690107 Functional Loss - KIF9 ENSG00000088727 CDS Human protein_coding chr3:47284679 chr3:47284680 nonsynonymous SNV 0.064 0 22 hPsi_associated_SNPs_5928 0 0 0 1 0 Ribosome 0.438634560012622 0.438714250072116 0.24675108 0 hPsi_site_11345 iPseU_CNN:0.24675108;iRNA_PseU:0 11346 chr12 110565210 110565210 1 + A G KIRC 110565209 + 110565189 110565229 41 AGTGATCAAATTAAATTCATTATGGACAGTCTCAATAAGGA AGTGATCAAATTAAATTCATTGTGGACAGTCTCAATAAGGA < 41bp 0.818143860291544 0.423899323112854 0.19980729 0.17692718 prediction 0.636287720583089 Functional Loss - IFT81 ENSG00000122970 CDS Human protein_coding chr12:110565209 chr12:110565210 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_5929 0 0 1 0 0 Cytosol 0.438707596240184 0.438697147802208 0 0 hPsi_site_11346 iPseU_CNN:0;iRNA_PseU:0 11347 chr14 55529931 55529931 1 + A G LUAD 55529930 + 55529910 55529950 41 CCTGGGGACCACCAGCACCATATCCTGCCCCTACAGGATCG CCTGGGGACCACCAGCACCATGTCCTGCCCCTACAGGATCG < 41bp 0.818141096612199 0.409010095392584 0.42183843 0.33361524 prediction 0.636282193224399 Functional Loss - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529930 chr14:55529931 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5930 0 0 1 0 0 Ribosome 0.438703043564126 0.438487648419052 0 0 hPsi_site_11347 iPseU_CNN:0;iRNA_PseU:0 11348 chr8 104439423 104439423 1 + A G LUSC 104439422 + 104439402 104439442 41 TGAACAAAGAACTAATCCTATATGTTCAATGACCTGGGGAT TGAACAAAGAACTAATCCTATGTGTTCAATGACCTGGGGAT < 41bp 0.893137493382219 0.57501471836067 0.32129934 0.25101584 prediction 0.636245550043097 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104439422 chr8:104439423 nonsynonymous SNV 0.871 2 22 hPsi_associated_SNPs_5931 0 0 1 0 2 Nucleus 0.438158936609018 0.438416768652109 0 0 hPsi_site_11348 iPseU_CNN:0;iRNA_PseU:0 11349 chr22 31998624 31998624 1 + A G LUSC 31998623 + 31998603 31998643 41 ACGCAGAGCGACAGCTTCTGTATAGGTCTTGGTTCATGTGG ACGCAGAGCGACAGCTTCTGTGTAGGTCTTGGTTCATGTGG < 41bp 0.818120211446214 0.398498010778048 0.4144546 0.32542562 prediction 0.636240422892428 Functional Loss - SFI1 ENSG00000198089 CDS Human protein_coding chr22:31998623 chr22:31998624 nonsynonymous SNV 0.133 0 22 hPsi_associated_SNPs_5932 0 0 1 0 1 chromatin 0.438344894344739 0.437916116476128 0 0 hPsi_site_11349 iPseU_CNN:0;iRNA_PseU:0 11350 chr1 114442687 114442687 1 + A C COAD 114442688 - 114442668 114442708 41 TTAGCAGCCACTACAAAAAGTTTTTTTGCTCCTACTCGGAG TTAGCAGCCACTACAAAAAGTGTTTTTGCTCCTACTCGGAG < 41bp 0.832064812454361 0.51394824519486 0.36887008 0.29777256 prediction 0.636233134519002 Functional Loss - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442688 chr1:114442687 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5933 0 0 1 0 0 chromatin 0.438712302352105 0.43871723713196 0 0 hPsi_site_11350 iPseU_CNN:0;iRNA_PseU:0 11351 chr11 94865297 94865297 1 + A G rs577634977 94865296 + 94865276 94865316 41 AGATCTTGCTGTGGCTCTGTTATGTTCTGAGGCCTTGGGAT AGATCTTGCTGTGGCTCTGTTGTGTTCTGAGGCCTTGGGAT < 41bp 0.818092313239028 0.475530151358782 0.59698665 0.2758237 prediction 0.636184626478057 Functional Loss - ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865296 chr11:94865297 . . 0 22 hPsi_associated_SNPs_5934 0 0 1 0 0 Ribosome 0.438897283506964 0.44075969045183 0.1939733 0 hPsi_site_11351 iPseU_CNN:0.1939733;iRNA_PseU:0 11352 chr11 124489566 124489566 1 + A G LUAD 124489565 + 124489545 124489585 41 ACAAACGACTTTTATCTGTCTATGAGATGCTCCCAGCTTTT ACAAACGACTTTTATCTGTCTGTGAGATGCTCCCAGCTTTT < 41bp 0.901463716749952 0.583372202784138 0.427811 0.25367856 prediction 0.636183027931626 Functional Loss - PANX3 ENSG00000154143 CDS Human protein_coding chr11:124489565 chr11:124489566 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5935 0 0 0 0 0 unknown 0.438173970349933 0.438368667705131 0 0 hPsi_site_11352 iPseU_CNN:0;iRNA_PseU:0 11353 chr19 2097323 2097323 1 + A G UCEC 2097322 + 2097302 2097342 41 AGCTGTACCAGGGGAAGATGTACTTCCCCGGTAAGGGGCGC AGCTGTACCAGGGGAAGATGTGCTTCCCCGGTAAGGGGCGC < 41bp 0.904603488820858 0.586519510074947 0.829015 0.38022915 prediction 0.636167957491821 Functional Loss - IZUMO4 ENSG00000099840 CDS Human protein_coding chr19:2097322 chr19:2097323 nonsynonymous SNV 0.981 3 22 hPsi_associated_SNPs_5936 0 0 0 0 2 Cytosol 0.438718593021336 0.438718592305427 0.65803 0 hPsi_site_11353 iPseU_CNN:0.65803;iRNA_PseU:0 11354 chr21 30422470 30422470 1 + T G UCEC 30422469 + 30422449 30422489 41 AAGTTTCCGGAAATCTTAGATTTGGCTCCTTTTTGCACCCT AAGTTTCCGGAAATCTTAGATGTGGCTCCTTTTTGCACCCT < 41bp 0.832962739438853 0.514881512164123 0.47608227 0.26504225 prediction 0.636162454549459 Functional Loss - USP16 ENSG00000156256 CDS Human protein_coding chr21:30422469 chr21:30422470 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5937 0 0 1 0 2 Ribosome 0.438718592995102 0.4387185929951 0 0 hPsi_site_11354 iPseU_CNN:0;iRNA_PseU:0 11355 chr1 15987657 15987657 1 + A G PRAD 15987656 + 15987636 15987676 41 GAGACAGAAAAATTAACAGGTACTTCATCTGACACTGGAAG GAGACAGAAAAATTAACAGGTGCTTCATCTGACACTGGAAG < 41bp 0.886444063788916 0.568390323485154 0.77418196 0.38717648 prediction 0.636107480607524 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15987656 chr1:15987657 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_5938 0 0 1 0 0 exosome 0.436678903381384 0.438218027779697 0.54836392 0 hPsi_site_11355 iPseU_CNN:0.54836392;iRNA_PseU:0 11356 chr5 131811519 131811519 1 + A G rs114898789 131811518 + 131811498 131811538 41 GGACACCGCGTCTGTGTCTGTATATGGCAGAGCTCCCAGAT GGACACCGCGTCTGTGTCTGTGTATGGCAGAGCTCCCAGAT < 41bp 0.818007265602501 0.423443014748416 0.67715544 0.45130867 prediction 0.636014531205002 Functional Loss - C5orf56 ENSG00000197536 CDS Human protein_coding chr5:131811518 chr5:131811519 synonymous SNV . 0 22 hPsi_associated_SNPs_5939 0 0 0 0 0 cytosol 0.39117252872843 0.423335238516136 0.35431088 0 hPsi_site_11356 iPseU_CNN:0.35431088;iRNA_PseU:0 11357 chr17 40705013 40705013 1 + T C rs202205173 40705014 - 40704994 40705034 41 GATGGATCTGAAGCCAGACGTACGGCCAAGTGCAGGCCGAT GATGGATCTGAAGCCAGACGTGCGGCCAAGTGCAGGCCGAT < 41bp 0.896264831804701 0.578281505434675 0.36866474 0.21542826 prediction 0.635966652740051 Functional Loss - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705014 chr17:40705013 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_5940 0 0 1 0 0 chromatin 0.438345527597459 0.438577569591044 0 0 hPsi_site_11357 iPseU_CNN:0;iRNA_PseU:0 11358 chr12 50232496 50232496 1 + T C rs17260403 50232497 - 50232477 50232517 41 GAATCATGGAGACCATGGCCTATGGGAGTTCCTGGCCCATC GAATCATGGAGACCATGGCCTGTGGGAGTTCCTGGCCCATC < 41bp 0.904721415644596 0.586779879806162 0.35581756 0.32403493 prediction 0.635883071676868 Functional Loss - BCDIN3D ENSG00000186666 CDS Human protein_coding chr12:50232497 chr12:50232496 synonymous SNV . 0 22 hPsi_associated_SNPs_5941 0 0 1 0 0 Ribosome 0.439503779213041 0.438784724589447 0 0 hPsi_site_11358 iPseU_CNN:0;iRNA_PseU:0 11359 chr2 136579628 136579628 1 + A G COAD 136579627 + 136579607 136579647 41 TGAACAACTCAGAAACTCATTAATATCAAACCCAATGGTGA TGAACAACTCAGAAACTCATTGATATCAAACCCAATGGTGA < 41bp 0.817923792262309 0.434743275193975 0.2945012 0.22260156 prediction 0.635847584524618 Functional Loss - LCT ENSG00000115850 CDS Human protein_coding chr2:136579627 chr2:136579628 synonymous SNV . 0 22 hPsi_associated_SNPs_5942 0 0 0 0 0 exosome 0.438794652195957 0.43862119447766 0 0 hPsi_site_11359 iPseU_CNN:0;iRNA_PseU:0 11360 chr7 102585004 102585004 1 + A G LUSC 102585003 + 102584983 102585023 41 GATGAATGGGAAAAAAAACATAGAGATCACACCGCAAAGAA GATGAATGGGAAAAAAAACATGGAGATCACACCGCAAAGAA < 41bp 0.889198759667664 0.571281224671969 0.28303558 0.224482 prediction 0.63583506999139 Functional Loss - LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102585003 chr7:102585004 nonsynonymous SNV 0.483 1 22 hPsi_associated_SNPs_5943 0 0 0 2 0 Cytosol 0.434776307950714 0.438718596264052 0 0 hPsi_site_11360 iPseU_CNN:0;iRNA_PseU:0 11361 chr5 76342421 76342421 1 + A G SKCM 76342420 + 76342400 76342440 41 GAACCAGAGGAAGGTGAAATTACAGACTCTCAGACTGAGGA GAACCAGAGGAAGGTGAAATTGCAGACTCTCAGACTGAGGA < 41bp 0.900026686447062 0.582111462773635 0.28269553 0.23203668 prediction 0.635830447346854 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76342420 chr5:76342421 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_5944 0 0 1 0 1 Ribosome 0.438587630666274 0.438718452039605 0 0 hPsi_site_11361 iPseU_CNN:0;iRNA_PseU:0 11362 chr1 161089692 161089692 1 + A G COAD 161089691 + 161089671 161089711 41 CCTATGTGTGAAAGCAACTCTACCATGCCTGGGCCCAGTCT CCTATGTGTGAAAGCAACTCTGCCATGCCTGGGCCCAGTCT < 41bp 0.907118450029242 0.589222783136014 0.5110176 0.34888947 prediction 0.635791333786457 Functional Loss - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161089691 chr1:161089692 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_5945 0 0 1 0 2 nucleolus 0.437014958041189 0.438697717345222 0.0220351999999999 0 hPsi_site_11362 iPseU_CNN:0.0220351999999999;iRNA_PseU:0 11363 chr1 179320569 179320569 1 + A G LUAD 179320568 + 179320548 179320588 41 GCTTTTATTCTCAAGAATGGTATGCACGTCAGCACTGTCCT GCTTTTATTCTCAAGAATGGTGTGCACGTCAGCACTGTCCT < 41bp 0.817890367997762 0.406311651567034 0.29468697 0.22175273 prediction 0.635780735995525 Functional Loss - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179320568 chr1:179320569 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5946 0 0 1 0 1 Ribosome 0.438611665085826 0.438629368099215 0 0 hPsi_site_11363 iPseU_CNN:0;iRNA_PseU:0 11364 chr18 57570507 57570507 1 + A G rs118066714 57570506 + 57570486 57570526 41 TTCTGAGAACACTGAAATGTTATACTCAGTGTTGATTTCTT TTCTGAGAACACTGAAATGTTGTACTCAGTGTTGATTTCTT < 41bp 0.817879415476246 0.465202465843349 0.79578483 0.63739884 prediction 0.635758830952493 Functional Loss - PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570506 chr18:57570507 . . 0 22 hPsi_associated_SNPs_5947 0 0 1 2 0 Cytosol 0.438712534830089 0.438410499499571 0.31677198 0 hPsi_site_11364 iPseU_CNN:0.31677198;iRNA_PseU:0 11365 chr7 1132397 1132397 1 + T G UCEC 1132396 + 1132376 1132416 41 TACATTGAGCAGAAAACAAATTTGCCGGCCCTGAACCGCTT TACATTGAGCAGAAAACAAATGTGCCGGCCCTGAACCGCTT < 41bp 0.817851003419479 0.498804975334247 0.41370064 0.27098513 prediction 0.635702006838957 Functional Loss - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1132396 chr7:1132397 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_5948 0 0 1 0 0 Cytosol 0.438725162975427 0.4386363745308 0 0 hPsi_site_11365 iPseU_CNN:0;iRNA_PseU:0 11366 chr21 43945903 43945903 1 + T G LUAD 43945902 + 43945882 43945922 41 TCAGGTACAGAGCCTTCATTTTTATTTTGACATTTCTGCTG TCAGGTACAGAGCCTTCATTTGTATTTTGACATTTCTGCTG < 41bp 0.817835753863824 0.495530795000801 0.21231052 0.19290856 prediction 0.635671507727648 Functional Loss - SLC37A1 ENSG00000160190 CDS Human protein_coding chr21:43945902 chr21:43945903 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5949 0 0 0 0 2 Nucleus 0.438624433148624 0.438644731632842 0 0 hPsi_site_11366 iPseU_CNN:0;iRNA_PseU:0 11367 chr18 909653 909653 1 + A G rs113395599 909652 + 909632 909672 41 TGTAGCGATGGGTTACCAGCTACCCTGTGTATACAGCCCTG TGTAGCGATGGGTTACCAGCTGCCCTGTGTATACAGCCCTG < 41bp 0.817822989664984 0.436686094846003 0.6804545 0.27800423 prediction 0.635645979329968 Functional Loss - ADCYAP1 ENSG00000141433 UTR3 Human protein_coding chr18:909652 chr18:909653 . . 0 22 hPsi_associated_SNPs_5950 0 0 0 2 0 exosome 0.43871899835645 0.438718344082245 0.360909 0 hPsi_site_11367 iPseU_CNN:0.360909;iRNA_PseU:0 11368 chr1 67793933 67793933 1 + A C HNSC 67793932 + 67793912 67793952 41 AGAAGCAATGTAAAGACATTTATTGTGACTATTTGGACTTT AGAAGCAATGTAAAGACATTTCTTGTGACTATTTGGACTTT < 41bp 0.817822046580691 0.453943761127908 0.40497303 0.30463105 prediction 0.635644093161381 Functional Loss - IL12RB2 ENSG00000081985 CDS Human protein_coding chr1:67793932 chr1:67793933 nonsynonymous SNV 0.132 1 22 hPsi_associated_SNPs_5951 0 0 0 0 1 cytosol 0.443805274990028 0.438735821776932 0 0 hPsi_site_11368 iPseU_CNN:0;iRNA_PseU:0 11369 chr6 130762121 130762121 1 + A G STAD 130762120 + 130762100 130762140 41 AAAGGCAAATGAACGGCATGTACACTGGTTTGATGGGAGAA AAAGGCAAATGAACGGCATGTGCACTGGTTTGATGGGAGAA < 41bp 0.817818216385183 0.40876509649131 0.33799782 0.2272079 prediction 0.635636432770365 Functional Loss - TMEM200A ENSG00000164484 CDS Human protein_coding chr6:130762120 chr6:130762121 nonsynonymous SNV 0.057 0 22 hPsi_associated_SNPs_5952 0 0 0 0 0 exosome 0.439733707641193 0.442808325833523 0 0 hPsi_site_11369 iPseU_CNN:0;iRNA_PseU:0 11370 chr5 33461331 33461331 1 + T G BLCA 33461330 + 33461310 33461350 41 TAGCGTATTTGGATTTTCTTTTAAACTAAACCTTTCTACTC TAGCGTATTTGGATTTTCTTTGAAACTAAACCTTTCTACTC < 41bp 0.838472823239161 0.520661510140474 0.543286 0.3523908 prediction 0.635622626197373 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33461330 chr5:33461331 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5953 0 0 1 0 2 Nucleus 0.438768101827078 0.438680562516688 0.0865720000000001 0 hPsi_site_11370 iPseU_CNN:0.0865720000000001;iRNA_PseU:0 11371 chr19 7855459 7855459 1 + A C rs4480916 7855458 + 7855438 7855478 41 TCTGGGCATGGGGCTGTGGATAGACCCACCACGTGATGAGA TCTGGGCATGGGGCTGTGGATCGACCCACCACGTGATGAGA < 41bp 0.845110029536896 0.527307203167043 0.8270843 0.57574296 prediction 0.635605652739706 Functional Loss - CLEC4GP1 ENSG00000268297 ncRNA_exonic Human unprocessed_pseudogene chr19:7855458 chr19:7855459 . . 0 22 hPsi_associated_SNPs_5954 0 0 0 0 0 unknown 0.438834670070687 0.435425131778469 0.50268268 0 hPsi_site_11371 iPseU_CNN:0.50268268;iRNA_PseU:0 11372 chrX 15838435 15838435 1 + T G UCEC 15838434 + 15838414 15838454 41 GACCCGGTGGAAAATGGCGATTTGTGGTAAAAGACAAAGTG GACCCGGTGGAAAATGGCGATGTGTGGTAAAAGACAAAGTG < 41bp 0.817795639493797 0.488443502596274 0.7393024 0.6624768 prediction 0.635591278987595 Functional Loss - ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15838434 chrX:15838435 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5955 0 0 0 0 1 Cytosol 0.438718592998733 0.438718490810311 0.1536512 0 hPsi_site_11372 iPseU_CNN:0.1536512;iRNA_PseU:0 11373 chr10 66586127 66586127 1 + A G rs73303537 66586126 + 66586106 66586146 41 GCATTCAGAACAAGCCCCTGTATTTTGCTGATTGGCTGTAC GCATTCAGAACAAGCCCCTGTGTTTTGCTGATTGGCTGTAC < 41bp 0.817785557801893 0.440926871681777 0.34450844 0.28235465 prediction 0.635571115603786 Functional Loss - ANXA2P3 ENSG00000216740 ncRNA_exonic Human processed_pseudogene chr10:66586126 chr10:66586127 . . 0 22 hPsi_associated_SNPs_5956 0 0 0 0 0 unknown 0.43871859297811 0.438718592735433 0 0 hPsi_site_11373 iPseU_CNN:0;iRNA_PseU:0 11374 chr1 248551088 248551088 1 + A G LGG 248551087 + 248551067 248551107 41 CTCATCTCCACACCCCCATGTACTTCCTCCTCAGCCACCTC CTCATCTCCACACCCCCATGTGCTTCCTCCTCAGCCACCTC < 41bp 0.896086506302247 0.578313621022705 0.753993 0.36252743 prediction 0.635545770559084 Functional Loss - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551087 chr1:248551088 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_5957 0 0 0 0 0 unknown 0.43871889398566 0.438718608512206 0.507986 0 hPsi_site_11374 iPseU_CNN:0.507986;iRNA_PseU:0 11375 chrX 140985469 140985469 1 + A G COAD 140985468 + 140985448 140985488 41 TTTTTATCCAAGCTATCCAGTATCATCCCTAGTGCCTTTCC TTTTTATCCAAGCTATCCAGTGTCATCCCTAGTGCCTTTCC < 41bp 0.817769789530033 0.417380822130037 0.68435764 0.40174475 prediction 0.635539579060066 Functional Loss - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140985468 chrX:140985469 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_5958 0 0 0 0 1 exosome 0.438719703189464 0.438721645190002 0.36871528 0 hPsi_site_11375 iPseU_CNN:0.36871528;iRNA_PseU:0 11376 chr11 48238947 48238947 1 + A G KIRC 48238946 + 48238926 48238966 41 GACACCTTCATGGAGGGGGTTATTGTGTTGGCCAACAGTGG GACACCTTCATGGAGGGGGTTGTTGTGTTGGCCAACAGTGG < 41bp 0.892903130615336 0.575139066697213 0.28608465 0.22508499 prediction 0.635528127836245 Functional Loss - OR4B1 ENSG00000175619 CDS Human protein_coding chr11:48238946 chr11:48238947 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_5959 0 0 0 0 0 unknown 0.438711012374292 0.438718128615148 0 0 hPsi_site_11376 iPseU_CNN:0;iRNA_PseU:0 11377 chr2 170936385 170936385 1 + A G UCEC 170936384 + 170936364 170936404 41 TACTACAGTTGCCTGAGAATTATAACACCATTTTTCAGTAC TACTACAGTTGCCTGAGAATTGTAACACCATTTTTCAGTAC < 41bp 0.817744753555123 0.417423422273672 0.37603194 0.37444758 prediction 0.635489507110246 Functional Loss - UBR3 ENSG00000144357 CDS Human protein_coding chr2:170936384 chr2:170936385 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_5960 0 0 1 0 1 Cytosol 0.438722600246074 0.43871463419426 0 0 hPsi_site_11377 iPseU_CNN:0;iRNA_PseU:0 11378 chr11 5758078 5758078 1 + A G HNSC 5758077 + 5758057 5758097 41 CTGAGTGCTTTGCTCAGATTTATGCCATTCACTTCTTTGTG CTGAGTGCTTTGCTCAGATTTGTGCCATTCACTTCTTTGTG < 41bp 0.817739035558557 0.415981863312208 0.32244968 0.46929094 prediction 0.635478071117114 Functional Loss - OR56B1 ENSG00000181023 CDS Human protein_coding chr11:5758077 chr11:5758078 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5961 0 0 0 0 0 exosome 0.438315544413216 0.435063407382695 0 0 hPsi_site_11378 iPseU_CNN:0;iRNA_PseU:0 11379 chr1 110256336 110256336 1 + A G KIRC 110256335 + 110256315 110256355 41 GACATTTTGGAGAACCAGGTTATGGATAACCACATGGAGCT GACATTTTGGAGAACCAGGTTGTGGATAACCACATGGAGCT < 41bp 0.904325670482071 0.586601310073712 0.46898055 0.507184 prediction 0.635448720816717 Functional Loss - GSTM5 ENSG00000134201 CDS Human protein_coding chr1:110256335 chr1:110256336 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_5962 0 0 0 0 2 Cytosol 0.438718592995102 0.438718592995103 0 0 hPsi_site_11379 iPseU_CNN:0;iRNA_PseU:0 11380 chr4 7012487 7012487 1 + T G LUSC 7012486 + 7012466 7012506 41 TAAACCCTGTCAAATGGCGTTTTTTAGAGTGGACCATGGCC TAAACCCTGTCAAATGGCGTTGTTTAGAGTGGACCATGGCC < 41bp 0.840600032095975 0.52290032750939 0.6373163 0.35647714 prediction 0.635399409173172 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7012486 chr4:7012487 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_5963 0 0 1 0 1 Cytosol 0.438718593151674 0.438718381406117 0.2746326 0 hPsi_site_11380 iPseU_CNN:0.2746326;iRNA_PseU:0 11381 chr7 36194142 36194142 1 + A G SKCM 36194141 + 36194121 36194161 41 GCATCGTGGAGTACCGAGAGTATATCGGTGGCTTCAAGAAG GCATCGTGGAGTACCGAGAGTGTATCGGTGGCTTCAAGAAG < 41bp 0.817694166481029 0.392295811755038 0.7125788 0.42552894 prediction 0.635388332962058 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36194141 chr7:36194142 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_5964 0 0 1 0 0 cytosol 0.43873209695698 0.438788002474718 0.4251576 0 hPsi_site_11381 iPseU_CNN:0.4251576;iRNA_PseU:0 11382 chr2 101885536 101885536 1 + A G UCEC 101885535 + 101885515 101885555 41 GTTGATCTACCTCCTGAATTTATTCACCTTTATATATCAAA GTTGATCTACCTCCTGAATTTGTTCACCTTTATATATCAAA < 41bp 0.888920168914593 0.571228525905898 0.66493696 0.37132514 prediction 0.635383286017391 Functional Loss - CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101885535 chr2:101885536 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5965 0 0 1 0 2 Ribosome 0.438718591759716 0.438718629840981 0.32987392 0 hPsi_site_11382 iPseU_CNN:0.32987392;iRNA_PseU:0 11383 chr18 61170782 61170782 1 + A G rs1455555 61170781 + 61170761 61170801 41 GGAGTGGCCCTATCAAATGTTATCCACAAAGTGTGCTTAGA GGAGTGGCCCTATCAAATGTTGTCCACAAAGTGTGCTTAGA < 41bp 0.900116583695523 0.582428851355354 0.46358773 0.24119583 prediction 0.635375464680339 Functional Loss - SERPINB5 ENSG00000206075 CDS Human protein_coding chr18:61170781 chr18:61170782 nonsynonymous SNV 0.984 1 22 hPsi_associated_SNPs_5966 0 0 0 0 0 nucleus 0.438717772408713 0.438713259021671 0 0 hPsi_site_11383 iPseU_CNN:0;iRNA_PseU:0 11384 chr17 55072947 55072947 1 + A G HNSC 55072946 + 55072926 55072966 41 ATGCCGTAAATAAGGGGCTCTACAGAGAGGCCACAGAGCTG ATGCCGTAAATAAGGGGCTCTGCAGAGAGGCCACAGAGCTG < 41bp 0.817685765851774 0.39635323857997 0.4124251 0.25372618 prediction 0.635371531703549 Functional Loss - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55072946 chr17:55072947 nonsynonymous SNV 0.697 5 22 hPsi_associated_SNPs_5967 0 0 1 2 2 Ribosome 0.438717861114144 0.438716672381212 0 0 hPsi_site_11384 iPseU_CNN:0;iRNA_PseU:0 11385 chr9 130550311 130550311 1 + T G UCEC 130550310 + 130550290 130550330 41 TGCTGGGCTGTTGAGCAATGTTTTGGTCAAGTTCACGCTGT TGCTGGGCTGTTGAGCAATGTGTTGGTCAAGTTCACGCTGT < 41bp 0.839036994211881 0.521354997028066 0.61981386 0.31376868 prediction 0.63536399436763 Functional Loss - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130550310 chr9:130550311 synonymous SNV . 0 22 hPsi_associated_SNPs_5968 0 0 1 0 2 Endoplasmic reticulum 0.438987236717973 0.438233774211995 0.23962772 0 hPsi_site_11385 iPseU_CNN:0.23962772;iRNA_PseU:0 11386 chr16 2752376 2752376 1 + A G UCEC 2752375 + 2752355 2752395 41 TGGTCAGCATCGGCTCCTCTTACAACTATGGGAACGAAGAC TGGTCAGCATCGGCTCCTCTTGCAACTATGGGAACGAAGAC < 41bp 0.908392087058695 0.59071096818399 0.59159935 0.35668147 prediction 0.635362237749411 Functional Loss - KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2752375 chr16:2752376 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_5969 0 0 1 0 1 Ribosome 0.438469466445992 0.438672666704586 0.1831987 0 hPsi_site_11386 iPseU_CNN:0.1831987;iRNA_PseU:0 11387 chr14 20823001 20823001 1 + A G UCEC 20823000 + 20822980 20823020 41 TGGCACAAATCAAGGCAGGTTACCAGTCTCTTAAGAAGATT TGGCACAAATCAAGGCAGGTTGCCAGTCTCTTAAGAAGATT < 41bp 0.908946744722245 0.59127413413978 0.32468456 0.19804871 prediction 0.635345221164929 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20823000 chr14:20823001 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5970 0 0 1 0 1 Cytosol 0.438453036979631 0.438662630851247 0 0 hPsi_site_11387 iPseU_CNN:0;iRNA_PseU:0 11388 chr1 24078983 24078983 1 + A G KIRC 24078982 + 24078962 24079002 41 ACTGCCTTCCCTCGAGCTGATATCCTCCTTCCAGCCAAAGC ACTGCCTTCCCTCGAGCTGATGTCCTCCTTCCAGCCAAAGC < 41bp 0.907501068617093 0.589890680806398 0.68472147 0.19263816 prediction 0.63522077562139 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24078982 chr1:24078983 nonsynonymous SNV 0.952 0 22 hPsi_associated_SNPs_5971 0 0 1 0 2 unknown 0.438692531582323 0.438716116340486 0.36944294 0 hPsi_site_11388 iPseU_CNN:0.36944294;iRNA_PseU:0 11389 chr11 93911662 93911662 1 + A G BLCA 93911661 + 93911641 93911681 41 TGGAAGAACTTGACAAAGTTTACAACCGTGCAATTAAGGCT TGGAAGAACTTGACAAAGTTTGCAACCGTGCAATTAAGGCT < 41bp 0.904489946198146 0.586888245910107 0.36012077 0.20706722 prediction 0.635203400576078 Functional Loss - PANX1 ENSG00000110218 CDS Human protein_coding chr11:93911661 chr11:93911662 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_5972 0 0 0 0 1 Endoplasmic reticulum 0.438718592731826 0.43871943879067 0 0 hPsi_site_11389 iPseU_CNN:0;iRNA_PseU:0 11390 chr1 100983832 100983832 1 + A G CHOL 100983831 + 100983811 100983851 41 TTCAGTCTGAATATGTTCATTACTAAGGCCTTGCCACTCCA TTCAGTCTGAATATGTTCATTGCTAAGGCCTTGCCACTCCA < 41bp 0.817600422084502 0.437951793481027 0.26920694 0.28377402 prediction 0.635200844169004 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100983831 chr1:100983832 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5973 0 0 1 0 1 Cytosol 0.438850719422492 0.43872396822668 0 0 hPsi_site_11390 iPseU_CNN:0;iRNA_PseU:0 11391 chr7 89790565 89790565 1 + T G COAD 89790564 + 89790544 89790584 41 TTTTGCTGTACTGCATGCAATTTATAGTCTGTCTTACCCAA TTTTGCTGTACTGCATGCAATGTATAGTCTGTCTTACCCAA < 41bp 0.817592787275054 0.491694005924222 0.31620082 0.3017245 prediction 0.635185574550108 Functional Loss - STEAP1 ENSG00000164647 CDS Human protein_coding chr7:89790564 chr7:89790565 nonsynonymous SNV 0.663 2 22 hPsi_associated_SNPs_5974 0 0 0 0 1 Endoplasmic reticulum 0.438384648605981 0.438648869750611 0 0 hPsi_site_11391 iPseU_CNN:0;iRNA_PseU:0 11392 chr4 17528572 17528572 1 + T G UCEC 17528571 + 17528551 17528591 41 AAGAACAGTATGAAGAGTCGTTTTGGATCTGCGTGGCCAGC AAGAACAGTATGAAGAGTCGTGTTGGATCTGCGTGGCCAGC < 41bp 0.81758393282569 0.495774657071721 0.8397879 0.5822792 prediction 0.63516786565138 Functional Loss - CLRN2 ENSG00000249581 CDS Human protein_coding chr4:17528571 chr4:17528572 nonsynonymous SNV 0.725 5 22 hPsi_associated_SNPs_5975 0 0 0 0 0 unknown 0.438715972674996 0.438404648697585 0.5150174 0 hPsi_site_11392 iPseU_CNN:0.5150174;iRNA_PseU:0 Polycystic liver disease Polycystic liver disease 11393 chr3 15686644 15686644 1 + T G UCEC 15686643 + 15686623 15686663 41 TGGCCTCTGCTGTTATTTACTTTACGAGAGGCCCACCTTAT TGGCCTCTGCTGTTATTTACTGTACGAGAGGCCCACCTTAT < 41bp 0.824103002159747 0.506524932148601 0.4146756 0.3330896 prediction 0.635156140022291 Functional Loss - BTD ENSG00000169814 CDS Human protein_coding chr3:15686643 chr3:15686644 synonymous SNV . 0 22 hPsi_associated_SNPs_5976 0 0 1 0 0 Ribosome 0.438718592995146 0.438718592514962 0 0 hPsi_site_11393 iPseU_CNN:0;iRNA_PseU:0 11394 chr16 23695263 23695263 1 + A G rs16972799 23695262 + 23695242 23695282 41 CCCACTGCCCGCCCAACCATTAACGAGCTGCTTAATGACGA CCCACTGCCCGCCCAACCATTGACGAGCTGCTTAATGACGA < 41bp 0.817576959502445 0.389759012483501 0.288715 0.20358029 prediction 0.63515391900489 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23695262 chr16:23695263 nonsynonymous SNV 0.947 0 22 hPsi_associated_SNPs_5977 0 0 1 0 1 Ribosome 0.438720862766955 0.438718773805593 0 0 hPsi_site_11394 iPseU_CNN:0;iRNA_PseU:0 11395 chr1 36030832 36030832 1 + T G HNSC 36030831 + 36030811 36030851 41 CTTCCGTTACCTTGCAGCTCTTCAGGGAACACCAGCATCCC CTTCCGTTACCTTGCAGCTCTGCAGGGAACACCAGCATCCC < 41bp 0.817536119017442 0.482554361313228 0.36966228 0.20072824 prediction 0.635072238034883 Functional Loss - NCDN ENSG00000020129 CDS Human protein_coding chr1:36030831 chr1:36030832 synonymous SNV . 0 22 hPsi_associated_SNPs_5978 0 0 0 0 1 Endoplasmic reticulum 0.438705669558224 0.4387015002366 0 0 hPsi_site_11395 iPseU_CNN:0;iRNA_PseU:0 11396 chr20 31656736 31656736 1 + A G rs6059063 31656735 + 31656715 31656755 41 CCAACATCCATGTGCTGTTCTATGTCCCTAAGGGGACCCCT CCAACATCCATGTGCTGTTCTGTGTCCCTAAGGGGACCCCT < 41bp 0.817533374394946 0.395114592140237 0.3114037 0.29365057 prediction 0.635066748789892 Functional Loss - BPIFB3 ENSG00000186190 CDS Human protein_coding chr20:31656735 chr20:31656736 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_5979 0 0 0 0 1 exosome 0.438995951914246 0.438721421425221 0 0 hPsi_site_11396 iPseU_CNN:0;iRNA_PseU:0 11397 chr16 90066374 90066374 1 + A G rs112467589 90066373 + 90066353 90066393 41 CCGAGCAGCTGTGCTCCGGGTAGATCACTATGGGGGCTCAG CCGAGCAGCTGTGCTCCGGGTGGATCACTATGGGGGCTCAG < 41bp 0.817531981783855 0.487701039072708 0.88327163 0.32223406 prediction 0.635063963567711 Functional Loss - AFG3L1P ENSG00000223959 ncRNA_exonic Human transcribed_unitary_pseudogene chr16:90066373 chr16:90066374 . . 0 22 hPsi_associated_SNPs_5980 0 0 0 0 1 unknown 0.438723595206669 0.438718613317692 0.76654326 0 hPsi_site_11397 iPseU_CNN:0.76654326;iRNA_PseU:0 11398 chr19 55688689 55688689 1 + A G rs116920913 55688688 + 55688668 55688708 41 AATAAGCCTCAGAATCTGGATATGGGGCCTGAATCTGGATA AATAAGCCTCAGAATCTGGATGTGGGGCCTGAATCTGGATA < 41bp 0.884260195084408 0.566728834151227 0.3283108 0.32951465 prediction 0.635062721866362 Functional Loss - SYT5 ENSG00000267577 ncRNA_exonic Human antisense chr19:55688688 chr19:55688689 . . 0 22 hPsi_associated_SNPs_5981 0 0 0 0 0 Cytosol 0.438718592913214 0.438718596016283 0 0 hPsi_site_11398 iPseU_CNN:0;iRNA_PseU:0 11399 chr11 56086228 56086228 1 + A G BLCA 56086227 + 56086207 56086247 41 AGGTGCTGGTAGCAATCCCTTACCTCTATTGCACATTCATT AGGTGCTGGTAGCAATCCCTTGCCTCTATTGCACATTCATT < 41bp 0.817524932660648 0.42962263559725 0.8045541 0.40879098 prediction 0.635049865321296 Functional Loss - OR8K3 ENSG00000181689 CDS Human other chr11:56086227 chr11:56086228 nonsynonymous SNV 0.141 2 22 hPsi_associated_SNPs_5982 0 0 0 0 0 unknown 0.434298803605921 0.430758946432041 0.6091082 0 hPsi_site_11399 iPseU_CNN:0.6091082;iRNA_PseU:0 11400 chrX 23693132 23693132 1 + A C LUAD 23693131 + 23693111 23693151 41 TTTGTGTGTCCAACTGAAATTATCGCTTTTGGCGACAGACT TTTGTGTGTCCAACTGAAATTCTCGCTTTTGGCGACAGACT < 41bp 0.860433609426395 0.542910443289265 0.61828554 0.33675745 prediction 0.63504633227426 Functional Loss - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23693131 chrX:23693132 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_5983 0 0 1 0 2 Endoplasmic reticulum 0.44550399265571 0.438572980167909 0.23657108 0 hPsi_site_11400 iPseU_CNN:0.23657108;iRNA_PseU:0 11401 chr4 110763770 110763770 1 + A G LUSC 110763769 + 110763749 110763789 41 TTGCAAAATCTTCTACATTCTATAACCCCTGCATTTATGTG TTGCAAAATCTTCTACATTCTGTAACCCCTGCATTTATGTG < 41bp 0.817514520389556 0.422894261722954 0.33335668 0.22024888 prediction 0.635029040779113 Functional Loss - RRH ENSG00000180245 CDS Human protein_coding chr4:110763769 chr4:110763770 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5984 0 0 1 0 1 nucleoplasm 0.438718591556725 0.438718611772715 0 0 hPsi_site_11401 iPseU_CNN:0;iRNA_PseU:0 11402 chr4 39482384 39482384 1 + A C rs10009841 39482383 + 39482363 39482403 41 ACAGCCTGGTCGTCAGATTCTAACCTTTTTGTTTCCGCCTC ACAGCCTGGTCGTCAGATTCTCACCTTTTTGTTTCCGCCTC < 41bp 0.817511495546267 0.479266185140206 0.416982 0.28087032 prediction 0.635022991092535 Functional Loss - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482383 chr4:39482384 . . 0 22 hPsi_associated_SNPs_5985 0 0 0 0 0 unknown 0.438718503917588 0.438718252537327 0 0 hPsi_site_11402 iPseU_CNN:0;iRNA_PseU:0 11403 chr2 32379525 32379525 1 + A G BRCA 32379524 + 32379504 32379544 41 GCCCTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGAC GCCCTCAAACTTTAGAAGCGTGCATACGTTGGAACAAGGAC < 41bp 0.817510784493487 0.434264744764892 0.4370562 0.2611032 prediction 0.635021568986975 Functional Loss - SPAST ENSG00000021574 CDS Human protein_coding chr2:32379524 chr2:32379525 nonsynonymous SNV 0.989 5 22 hPsi_associated_SNPs_5986 0 0 1 0 1 Ribosome 0.438422501510706 0.439108039026973 0 0 hPsi_site_11403 iPseU_CNN:0;iRNA_PseU:0 11404 chr5 23527643 23527643 1 + A C rs199802267 23527642 + 23527622 23527662 41 TGTGGGCGGGGCTTTAGCAATAAGTCACACCTCCTCAGACA TGTGGGCGGGGCTTTAGCAATCAGTCACACCTCCTCAGACA < 41bp 0.879269496736183 0.561764638053315 0.43858558 0.27280134 prediction 0.635009717365736 Functional Loss - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527642 chr5:23527643 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_5987 0 0 0 0 0 unknown 0.438717957347733 0.438715556294881 0 0 hPsi_site_11404 iPseU_CNN:0;iRNA_PseU:0 11405 chr5 134118702 134118702 1 + T G DLBC 134118701 + 134118681 134118721 41 AAAAGGTTGCCCCAAACCAATTAAATCCTGGGTCCAGTGTG AAAAGGTTGCCCCAAACCAATGAAATCCTGGGTCCAGTGTG < 41bp 0.817489578350398 0.493673575037957 0.35551894 0.25944692 prediction 0.634979156700796 Functional Loss - DDX46 ENSG00000145833 CDS Human protein_coding chr5:134118701 chr5:134118702 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_5988 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592992361 0 0 hPsi_site_11405 iPseU_CNN:0;iRNA_PseU:0 11406 chr14 20216413 20216413 1 + A G BLCA 20216412 + 20216392 20216432 41 ATAAGATATTCTCCTTGTTTTACACAGTGATTACACCTATG ATAAGATATTCTCCTTGTTTTGCACAGTGATTACACCTATG < 41bp 0.885270522782162 0.56779598179561 0.5180213 0.26818144 prediction 0.634949081973105 Functional Loss - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216412 chr14:20216413 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5989 0 0 0 0 0 unknown 0.438718543621333 0.438718590054243 0.0360426 0 hPsi_site_11406 iPseU_CNN:0.0360426;iRNA_PseU:0 11407 chr20 76721 76721 1 + A G COAD 76720 + 76700 76740 41 GATGTTTAGATACTGAAAGGTACATACTTCTTTGTAGGAAC GATGTTTAGATACTGAAAGGTGCATACTTCTTTGTAGGAAC < 41bp 0.888409002779922 0.570937606198851 0.7941328 0.24084952 prediction 0.634942793162141 Functional Loss - DEFB125 ENSG00000178591 CDS Human protein_coding chr20:76720 chr20:76721 nonsynonymous SNV 0.682 3 22 hPsi_associated_SNPs_5990 0 0 0 0 1 unknown 0.438718581147261 0.438718592522215 0.5882656 0 hPsi_site_11407 iPseU_CNN:0.5882656;iRNA_PseU:0 11408 chr1 110561689 110561689 1 + T G UCEC 110561688 + 110561668 110561708 41 TCCAGGGTCGTCTACTCAATTTGAGCTGCTCCACAGTTCCC TCCAGGGTCGTCTACTCAATTGGAGCTGCTCCACAGTTCCC < 41bp 0.817442861578107 0.480862025576954 0.20572746 0.10808143 prediction 0.634885723156213 Functional Loss - AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110561688 chr1:110561689 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_5991 0 0 1 0 1 Ribosome 0.438721894489261 0.438728691353324 0 0 hPsi_site_11408 iPseU_CNN:0;iRNA_PseU:0 11409 chr6 27216940 27216940 1 + T G UCEC 27216939 + 27216919 27216959 41 GATAAGCCTGGAACACAGATTTTATGGCCTGAGTATACCTG GATAAGCCTGGAACACAGATTGTATGGCCTGAGTATACCTG < 41bp 0.833992125904564 0.516551140328085 0.47045362 0.3550536 prediction 0.634881971152958 Functional Loss - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27216939 chr6:27216940 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_5992 0 0 0 0 2 Cytosol 0.43871859310788 0.438718416485773 0 0 hPsi_site_11409 iPseU_CNN:0;iRNA_PseU:0 11410 chr2 113482779 113482779 1 + A C rs4849116 113482778 + 113482758 113482798 41 GAAAGCTCCACGTGGGCACCTACACAGGGCCCCACCAGCAC GAAAGCTCCACGTGGGCACCTCCACAGGGCCCCACCAGCAC < 41bp 0.859315705725962 0.54187650655826 0.37771225 0.22183621 prediction 0.634878398335404 Functional Loss - NT5DC4 ENSG00000144130 CDS Human protein_coding chr2:113482778 chr2:113482779 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_5993 0 0 0 0 2 chromatin 0.438763334585572 0.438668326688808 0 0 hPsi_site_11410 iPseU_CNN:0;iRNA_PseU:0 11411 chrX 1748732 1748732 1 + A G rs141937160 1748731 + 1748711 1748751 41 CAGGTCCGAGGGCGAGCGGCTACAGTTCATGCAAGCTCTGC CAGGTCCGAGGGCGAGCGGCTGCAGTTCATGCAAGCTCTGC < 41bp 0.817424139883006 0.38178987936852 0.7282145 0.3312735 prediction 0.634848279766011 Functional Loss - ASMT ENSG00000196433 CDS Human protein_coding chrX:1748731 chrX:1748732 synonymous SNV . 0 22 hPsi_associated_SNPs_5994 0 0 0 0 1 exosome 0.4387495105754 0.438723108402787 0.456429 0 hPsi_site_11411 iPseU_CNN:0.456429;iRNA_PseU:0 11412 chr1 231396380 231396380 1 + T G BLCA 231396379 + 231396359 231396399 41 CCTTCACCCTGAGCAAAGTATTTAAACAAATTTTCTCGAAG CCTTCACCCTGAGCAAAGTATGTAAACAAATTTTCTCGAAG < 41bp 0.817414279016923 0.485831932402835 0.57906234 0.30837092 prediction 0.634828558033847 Functional Loss - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231396379 chr1:231396380 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_5995 0 0 1 0 1 Cytosol 0.438718617909777 0.438718601869115 0.15812468 0 hPsi_site_11412 iPseU_CNN:0.15812468;iRNA_PseU:0 11413 chr3 119198976 119198976 1 + A G STAD 119198975 + 119198955 119198995 41 GCTGTTTGGCCAATTTATCCTACAGGTCTTGGACGGTGGGA GCTGTTTGGCCAATTTATCCTGCAGGTCTTGGACGGTGGGA < 41bp 0.817411729062153 0.405246009352361 0.4729039 0.30161327 prediction 0.634823458124306 Functional Loss - POGLUT1 ENSG00000163389 CDS Human protein_coding chr3:119198975 chr3:119198976 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_5996 0 0 1 0 2 Ribosome 0.438710408301266 0.438716021462687 0 0 hPsi_site_11413 iPseU_CNN:0;iRNA_PseU:0 11414 chr1 3392589 3392589 1 + A G COAD 3392588 + 3392568 3392608 41 TGGAGCGCATGGAGCAGATGTACACGCTGCACACACAGCTG TGGAGCGCATGGAGCAGATGTGCACGCTGCACACACAGCTG < 41bp 0.91037655031671 0.592974301495987 0.6078033 0.23178741 prediction 0.634804497641447 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3392588 chr1:3392589 nonsynonymous SNV 0.967 0 22 hPsi_associated_SNPs_5997 0 0 1 0 2 Ribosome 0.432525718787891 0.430215214074829 0.2156066 0 hPsi_site_11414 iPseU_CNN:0.2156066;iRNA_PseU:0 11415 chr3 50614976 50614976 1 + A C SKCM 50614975 + 50614955 50614995 41 GTGGATAAGCGGGAAGCTGCTATCTCTCTGACCCATGAGAA GTGGATAAGCGGGAAGCTGCTCTCTCTCTGACCCATGAGAA < 41bp 0.817400011244139 0.438185166246171 0.779814 0.36049873 prediction 0.634800022488279 Functional Loss - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50614975 chr3:50614976 nonsynonymous SNV 0.202 1 22 hPsi_associated_SNPs_5998 0 0 1 0 2 Ribosome 0.438718428270827 0.438718603286164 0.559628 0 hPsi_site_11415 iPseU_CNN:0.559628;iRNA_PseU:0 11416 chr21 37692589 37692589 1 + A G rs2236433 37692588 + 37692568 37692608 41 GGCGCAGCCACCCCGCGGGATACGCCTCAGCGCGGTGAGCA GGCGCAGCCACCCCGCGGGATGCGCCTCAGCGCGGTGAGCA < 41bp 0.817396250971989 0.429328159420008 0.7002757 0.2582663 prediction 0.634792501943978 Functional Loss - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37692588 chr21:37692589 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_5999 0 0 1 0 1 Cytosol 0.438708919660872 0.438702068193254 0.4005514 0 hPsi_site_11416 iPseU_CNN:0.4005514;iRNA_PseU:0 11417 chr8 121267580 121267580 1 + A G LUAD 121267579 + 121267559 121267599 41 GCCACAGCCTATAGGGTTGTTATAGAATCCCTCCAGGGTGA GCCACAGCCTATAGGGTTGTTGTAGAATCCCTCCAGGGTGA < 41bp 0.817386590535911 0.40893346561802 0.564294 0.42207706 prediction 0.634773181071823 Functional Loss - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121267579 chr8:121267580 nonsynonymous SNV 0.280 0 22 hPsi_associated_SNPs_6000 0 0 0 0 0 Ribosome 0.438715926354976 0.438717735983081 0.128588 0 hPsi_site_11417 iPseU_CNN:0.128588;iRNA_PseU:0 11418 chr3 97983846 97983846 1 + A C SKCM 97983845 + 97983825 97983865 41 TCTTATACAATTATCCTCTTTACAATCTTAGAAAAGAAGTC TCTTATACAATTATCCTCTTTCCAATCTTAGAAAAGAAGTC < 41bp 0.817347258048026 0.498357294047826 0.25722283 0.2636484 prediction 0.634694516096051 Functional Loss - OR5H6 ENSG00000230301 CDS Human protein_coding chr3:97983845 chr3:97983846 nonsynonymous SNV 0.008 3 22 hPsi_associated_SNPs_6001 0 0 0 0 0 unknown 0.438718318078323 0.438718593597513 0 0 hPsi_site_11418 iPseU_CNN:0;iRNA_PseU:0 11419 chr6 28558813 28558813 1 + A G rs144260483 28558812 + 28558792 28558832 41 TTCTGCCTGTTTGGGATGCTTATAAGTCCAGCCATCCTTCC TTCTGCCTGTTTGGGATGCTTGTAAGTCCAGCCATCCTTCC < 41bp 0.817312831770056 0.467866054981895 0.31007886 0.33436427 prediction 0.634625663540112 Functional Loss - ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28558812 chr6:28558813 . . 0 22 hPsi_associated_SNPs_6002 0 0 0 0 0 nucleolus 0.438718592995154 0.438718592996267 0 0 hPsi_site_11419 iPseU_CNN:0;iRNA_PseU:0 11420 chr1 1389856 1389856 1 + T G PRAD 1389855 + 1389835 1389875 41 GACGTCCCGCATCACGGTGCTTGAGGCGCTGCGGCACCCCA GACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCA < 41bp 0.81731059773095 0.493950686014312 0.57227373 0.32504582 prediction 0.6346211954619 Functional Loss - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1389855 chr1:1389856 synonymous SNV . 0 22 hPsi_associated_SNPs_6003 0 0 0 0 1 Nucleus 0.438690943844266 0.438677432358693 0.14454746 0 hPsi_site_11420 iPseU_CNN:0.14454746;iRNA_PseU:0 11421 chr3 122419622 122419622 1 + A G LUAD 122419621 + 122419601 122419641 41 GTCTGGGATTCAGTCTGTGTTAAAAGTGTCCATACTGATAA GTCTGGGATTCAGTCTGTGTTGAAAGTGTCCATACTGATAA < 41bp 0.89267689371874 0.575374966896268 0.32179356 0.30751705 prediction 0.634603853644944 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419621 chr3:122419622 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6004 0 0 0 0 0 Nucleus 0.438720466279666 0.438719612769711 0 0 hPsi_site_11421 iPseU_CNN:0;iRNA_PseU:0 11422 chr2 108627311 108627311 1 + A G UCEC 108627310 + 108627290 108627330 41 GTCTGGGACTGAAGATAATTTACAGTGACCCCATCTAAATA GTCTGGGACTGAAGATAATTTGCAGTGACCCCATCTAAATA < 41bp 0.817267191045576 0.420559096608185 0.51093715 0.2869636 prediction 0.634534382091152 Functional Loss - SLC5A7 ENSG00000115665 CDS Human protein_coding chr2:108627310 chr2:108627311 synonymous SNV . 0 22 hPsi_associated_SNPs_6005 0 0 0 0 0 unknown 0.438707016362745 0.438718644254277 0.0218742999999999 0 hPsi_site_11422 iPseU_CNN:0.0218742999999999;iRNA_PseU:0 11423 chr17 61905251 61905251 1 + A G rs186941288 61905250 + 61905230 61905270 41 AGCGCCCCCCGTCTATATCATATCGCCTCTCGGTCCTCCTA AGCGCCCCCCGTCTATATCATGTCGCCTCTCGGTCCTCCTA < 41bp 0.817252302282578 0.412877589500188 0.7189737 0.5423014 prediction 0.634504604565155 Functional Loss - PSMC5 ENSG00000087191 UTR5 Human protein_coding chr17:61905250 chr17:61905251 . . 0 22 hPsi_associated_SNPs_6006 0 0 0 0 1 Ribosome 0.438717136126229 0.438712835403264 0.3533446 0 hPsi_site_11423 iPseU_CNN:0.3533446;iRNA_PseU:0 11424 chr11 73625511 73625511 1 + A G CESC 73625510 + 73625490 73625530 41 CTGCTCTTGGCCCGGGAAGATAAGAAACTTCAGTGCTTGGG CTGCTCTTGGCCCGGGAAGATGAGAAACTTCAGTGCTTGGG < 41bp 0.817215487952164 0.390758929245133 0.4201843 0.2860657 prediction 0.634430975904329 Functional Loss - PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73625510 chr11:73625511 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6007 0 0 1 0 1 Ribosome 0.438718617723736 0.438718612095715 0 0 hPsi_site_11424 iPseU_CNN:0;iRNA_PseU:0 11425 chrX 16861479 16861479 1 + A G rs41305163 16861478 + 16861458 16861498 41 CCTGGAGTGGAGGAGGGTTGTATCTAAGCCTCCACTATCAG CCTGGAGTGGAGGAGGGTTGTGTCTAAGCCTCCACTATCAG < 41bp 0.817182060153948 0.440480120148376 0.6598606 0.25960028 prediction 0.634364120307895 Functional Loss - TXLNG ENSG00000086712 UTR3 Human protein_coding chrX:16861478 chrX:16861479 . . 0 22 hPsi_associated_SNPs_6008 0 0 1 0 0 chromatin 0.438550389575255 0.438716163202799 0.3197212 0 hPsi_site_11425 iPseU_CNN:0.3197212;iRNA_PseU:0 11426 chr20 29628263 29628263 1 + A G BLCA 29628262 + 29628242 29628282 41 TTGGCCTCAAATAGCTGCTTTATTAGATGCAATGAAGCAGG TTGGCCTCAAATAGCTGCTTTGTTAGATGCAATGAAGCAGG < 41bp 0.817181201476005 0.406193540526601 0.4107939 0.29210192 prediction 0.63436240295201 Functional Loss - FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29628262 chr20:29628263 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_6009 0 0 0 0 2 unknown 0.438732593540193 0.438720994680616 0 0 hPsi_site_11426 iPseU_CNN:0;iRNA_PseU:0 11427 chr22 38087287 38087287 1 + A G COAD 38087286 + 38087266 38087306 41 AAGCCCCCAAGGGCCCCTCGTACCAGCAAGGCCCAGCGCCG AAGCCCCCAAGGGCCCCTCGTGCCAGCAAGGCCCAGCGCCG < 41bp 0.817177632397809 0.400561032017816 0.7429346 0.32112077 prediction 0.634355264795617 Functional Loss - NOL12 ENSG00000100101 CDS Human protein_coding chr22:38087286 chr22:38087287 nonsynonymous SNV 0.735 5 22 hPsi_associated_SNPs_6010 0 0 1 0 0 Cytosol 0.438717355409897 0.438718484292271 0.4858692 0 hPsi_site_11427 iPseU_CNN:0.4858692;iRNA_PseU:0 11428 chr1 158261887 158261887 1 + A G STAD 158261886 + 158261866 158261906 41 TCCTCCAGATCCCTTTGAAGTACAGGTGAAAGCGGGCTGTG TCCTCCAGATCCCTTTGAAGTGCAGGTGAAAGCGGGCTGTG < 41bp 0.817167640555341 0.404369791761945 0.34008855 0.19520861 prediction 0.634335281110682 Functional Loss - CD1C ENSG00000158481 CDS Human protein_coding chr1:158261886 chr1:158261887 synonymous SNV . 0 22 hPsi_associated_SNPs_6011 0 0 0 0 1 exosome 0.425952643071185 0.438130090792646 0 0 hPsi_site_11428 iPseU_CNN:0;iRNA_PseU:0 11429 chr17 48626309 48626309 1 + A G COAD 48626308 + 48626288 48626328 41 GGCCTGACGTGGACAAGGTGTACATGACGTTCGTGCAGGTG GGCCTGACGTGGACAAGGTGTGCATGACGTTCGTGCAGGTG < 41bp 0.817165988441602 0.479731870351017 0.8069933 0.5394058 prediction 0.634331976883204 Functional Loss - SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48626308 chr17:48626309 nonsynonymous SNV 0.839 3 22 hPsi_associated_SNPs_6012 0 0 1 0 1 nucleus 0.438722945111563 0.438720801788691 0.535175 0 hPsi_site_11429 iPseU_CNN:0.535175;iRNA_PseU:0 11430 chr10 112352862 112352862 1 + A G UCEC 112352861 + 112352841 112352881 41 CTATGATCAGCAAACTGAGGTACAATCCCAGATTTGACAAA CTATGATCAGCAAACTGAGGTGCAATCCCAGATTTGACAAA < 41bp 0.897992630502513 0.580861078249809 0.7902269 0.7163217 prediction 0.634263104505408 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112352861 chr10:112352862 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6013 0 0 1 0 1 Ribosome 0.438719031839843 0.438548604299691 0.1478104 0 hPsi_site_11430 iPseU_CNN:0.1478104;iRNA_PseU:0 11431 chr3 13679130 13679130 1 + A G UCEC 13679129 + 13679109 13679149 41 CGCCAGCGCGCATCACGCACTACCAGCTCAACTTCCAGACG CGCCAGCGCGCATCACGCACTGCCAGCTCAACTTCCAGACG < 41bp 0.817118765655454 0.400373725966274 0.7457551 0.23285306 prediction 0.634237531310909 Functional Loss - FBLN2 ENSG00000163520 CDS Human protein_coding chr3:13679129 chr3:13679130 nonsynonymous SNV 0.885 4 22 hPsi_associated_SNPs_6014 0 0 0 0 1 Endoplasmic reticulum 0.438249849750236 0.438701889949533 0.4915102 0 hPsi_site_11431 iPseU_CNN:0.4915102;iRNA_PseU:0 11432 chr16 31494552 31494552 1 + A G LUSC 31494551 + 31494531 31494571 41 ACATCCTAGTCATTGCTGCATATTTCCTGCTGGTCATTGGC ACATCCTAGTCATTGCTGCATGTTTCCTGCTGGTCATTGGC < 41bp 0.896246086530903 0.579133163571783 0.35140848 0.24396655 prediction 0.63422584591824 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31494551 chr16:31494552 nonsynonymous SNV 0.979 5 22 hPsi_associated_SNPs_6015 0 0 0 1 1 exosome 0.438719252163164 0.438718657615059 0 0 hPsi_site_11432 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 11433 chr18 48439249 48439249 1 + A C KIRC 48439248 + 48439228 48439268 41 GCAAGATGACATTGAGAGTTTAATGCCAATTGTATATACAC GCAAGATGACATTGAGAGTTTCATGCCAATTGTATATACAC < 41bp 0.817109967996496 0.455175005423136 0.34786445 0.24124351 prediction 0.634219935992993 Functional Loss - ME2 ENSG00000082212 CDS Human protein_coding chr18:48439248 chr18:48439249 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_6016 0 0 0 0 2 Ribosome 0.437712149794054 0.437797942587863 0 0 hPsi_site_11433 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 11434 chr7 100192102 100192102 1 + A C GBM 100192101 + 100192081 100192121 41 CCCTGAGGAAGGTGTCCCACTACCTGCCTCACCTGCGCGTG CCCTGAGGAAGGTGTCCCACTCCCTGCCTCACCTGCGCGTG < 41bp 0.887078502548112 0.569969505396634 0.6591855 0.19190341 prediction 0.634217994302955 Functional Loss - FBXO24 ENSG00000106336 CDS Human protein_coding chr7:100192101 chr7:100192102 nonsynonymous SNV 0.961 1 22 hPsi_associated_SNPs_6017 0 0 0 0 2 exosome 0.438718534875896 0.438718593056732 0.318371 0 hPsi_site_11434 iPseU_CNN:0.318371;iRNA_PseU:0 11435 chr19 55054778 55054778 1 + A G UCEC 55054777 + 55054757 55054797 41 AGAAGAGACACAGGAGATCATATATGCCCAGTTAAACCACC AGAAGAGACACAGGAGATCATGTATGCCCAGTTAAACCACC < 41bp 0.889624660774716 0.572517082311032 0.60408247 0.5648821 prediction 0.634215156927367 Functional Loss - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55054777 chr19:55054778 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6018 0 0 0 0 1 Nucleus 0.438715889499405 0.438886625457562 0.07840074 0 hPsi_site_11435 iPseU_CNN:0.07840074;iRNA_PseU:0 11436 chr10 102240838 102240838 1 + T G UCEC 102240837 + 102240817 102240857 41 AGAAACTGCAGCCTTGGAGATTTTGATAACTGTGGCTGTGA AGAAACTGCAGCCTTGGAGATGTTGATAACTGTGGCTGTGA < 41bp 0.817099870852851 0.487514527759283 0.27473593 0.24367744 prediction 0.634199741705702 Functional Loss - WNT8B ENSG00000075290 CDS Human protein_coding chr10:102240837 chr10:102240838 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6019 0 0 0 0 2 exosome 0.438602798065597 0.437504514319264 0 0 hPsi_site_11436 iPseU_CNN:0;iRNA_PseU:0 11437 chr5 95116098 95116098 1 + A C COAD 95116097 + 95116077 95116117 41 AGAGACTTTCTTGTCATTTTTAGAATACCTGTACACAGACT AGAGACTTTCTTGTCATTTTTCGAATACCTGTACACAGACT < 41bp 0.817083396311341 0.455733591941877 0.33764684 0.28141654 prediction 0.634166792622681 Functional Loss - RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95116097 chr5:95116098 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_6020 0 0 1 0 1 Cytosol 0.438406404814561 0.438778269808852 0 0 hPsi_site_11437 iPseU_CNN:0;iRNA_PseU:0 11438 chr1 233092096 233092096 1 + A G BRCA 233092095 + 233092075 233092115 41 TAATGTCTTTTCCTTCAGGTTAGAGCCTCCACCTGGAAAAC TAATGTCTTTTCCTTCAGGTTGGAGCCTCCACCTGGAAAAC < 41bp 0.905258391815252 0.588199573821457 0.48667657 0.28203833 prediction 0.634117635987591 Functional Loss - NTPCR ENSG00000135778 CDS Human protein_coding chr1:233092095 chr1:233092096 synonymous SNV . 0 22 hPsi_associated_SNPs_6021 0 0 1 2 2 Ribosome 0.438718586494996 0.438709474047756 0 0 hPsi_site_11438 iPseU_CNN:0;iRNA_PseU:0 11439 chr6 83905769 83905769 1 + T G UCEC 83905768 + 83905748 83905788 41 GTACCCCAATTGGAAGCACATTTCCTGTAAGCATGCTGAAA GTACCCCAATTGGAAGCACATGTCCTGTAAGCATGCTGAAA < 41bp 0.817044154325871 0.481345681518126 0.4030498 0.30780873 prediction 0.634088308651742 Functional Loss - RWDD2A ENSG00000013392 CDS Human protein_coding chr6:83905768 chr6:83905769 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_6022 0 0 0 0 0 Cytosol 0.438717192769106 0.441482493074651 0 0 hPsi_site_11439 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 11440 chr18 33234680 33234680 1 + A G UCEC 33234679 + 33234659 33234699 41 AGCCACCTCCTTGATTTGGGTACTCTTGGATATGTTCCTGC AGCCACCTCCTTGATTTGGGTGCTCTTGGATATGTTCCTGC < 41bp 0.817039036703423 0.425895812014937 0.6737057 0.22122967 prediction 0.634078073406846 Functional Loss - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33234679 chr18:33234680 synonymous SNV . 0 22 hPsi_associated_SNPs_6023 0 0 1 0 2 Endoplasmic reticulum 0.438687957429976 0.438718567056558 0.3474114 0 hPsi_site_11440 iPseU_CNN:0.3474114;iRNA_PseU:0 11441 chr5 140515478 140515478 1 + A G rs188107222 140515477 + 140515457 140515497 41 GCCAGGGACTGTGTTTCCCTTAAAAATAGCCCAGGACTTTG GCCAGGGACTGTGTTTCCCTTGAAAATAGCCCAGGACTTTG < 41bp 0.817038824473452 0.411591085771118 0.34380567 0.24449584 prediction 0.634077648946904 Functional Loss - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140515477 chr5:140515478 synonymous SNV . 0 22 hPsi_associated_SNPs_6024 0 0 0 0 0 Endoplasmic reticulum 0.438686449661073 0.438718450863879 0 0 hPsi_site_11441 iPseU_CNN:0;iRNA_PseU:0 11442 chr1 27094372 27094372 1 + A G LIHC 27094371 + 27094351 27094391 41 GGAAGATGTGGGTGGACCGTTATCTGGCCTTCACTGAGGAG GGAAGATGTGGGTGGACCGTTGTCTGGCCTTCACTGAGGAG < 41bp 0.906455048528931 0.58941950894141 0.6458086 0.3114518 prediction 0.634071079175043 Functional Loss - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27094371 chr1:27094372 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6025 0 0 1 0 1 Nucleus 0.438718592995126 0.438718593002055 0.2916172 0 hPsi_site_11442 iPseU_CNN:0.2916172;iRNA_PseU:0 11443 chr13 50080847 50080847 1 + A C rs2031532 50080846 + 50080826 50080866 41 AGATGTCGAATATAATGTCCTATACTTTGCACAATCAGAGA AGATGTCGAATATAATGTCCTCTACTTTGCACAATCAGAGA < 41bp 0.872831515611482 0.555796253724827 0.630934 0.30593154 prediction 0.634070523773309 Functional Loss - PHF11;SETDB2-PHF11 ENSG00000136147 CDS Human protein_coding chr13:50080846 chr13:50080847 synonymous SNV . 0 22 hPsi_associated_SNPs_6026 0 1 0 4 2 unknown 0.43872596444806 0.438718529820051 0.261868 0 hPsi_site_11443 iPseU_CNN:0.261868;iRNA_PseU:0 11444 chr14 95058462 95058462 1 + A C rs6116 95058461 + 95058441 95058481 41 AGCGGCAGCCACGGGGACAATATTCACTTTCAGGTCGGCCC AGCGGCAGCCACGGGGACAATCTTCACTTTCAGGTCGGCCC < 41bp 0.81702305076761 0.449136606026462 0.38130677 0.32856435 prediction 0.63404610153522 Functional Loss - SERPINA5 ENSG00000188488;ENSG00000273259 CDS Human other chr14:95058461 chr14:95058462 synonymous SNV . 0 22 hPsi_associated_SNPs_6027 0 0 1 0 1 cytosol 0.438343363841624 0.438718372923354 0 0 hPsi_site_11444 iPseU_CNN:0;iRNA_PseU:0 11445 chr1 150967148 150967148 1 + T G UCEC 150967147 + 150967127 150967167 41 AGCTGAGTTCAGGAAGAAATTTGGGAAGTCCCTCTACTCTT AGCTGAGTTCAGGAAGAAATTGGGGAAGTCCCTCTACTCTT < 41bp 0.817019545640478 0.486605445562293 0.3616957 0.31465167 prediction 0.634039091280957 Functional Loss - ANXA9 ENSG00000143412 CDS Human protein_coding chr1:150967147 chr1:150967148 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6028 0 0 0 0 2 cytosol 0.438702340037049 0.438718592997422 0 0 hPsi_site_11445 iPseU_CNN:0;iRNA_PseU:0 11446 chr15 45898605 45898605 1 + A G UCEC 45898604 + 45898584 45898624 41 TTAACACAGAAAAGAGCACTTAAACTGCAGCAGAAGAGGCA TTAACACAGAAAAGAGCACTTGAACTGCAGCAGAAGAGGCA < 41bp 0.817019225628491 0.422969245800899 0.50007296 0.27226683 prediction 0.634038451256982 Functional Loss - BLOC1S6 ENSG00000104164 CDS Human protein_coding chr15:45898604 chr15:45898605 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_6029 0 0 1 12 1 Cytosol 0.437914478909506 0.438653250888873 0.000145920000000022 0 hPsi_site_11446 iPseU_CNN:0.000145920000000022;iRNA_PseU:0 11447 chr1 43650979 43650979 1 + T G rs566366634 43650978 + 43650958 43650998 41 GCCAGGGAGAGTTCTGCTGTTTGAGAAGATGGAAGAAAAGG GCCAGGGAGAGTTCTGCTGTTGGAGAAGATGGAAGAAAAGG < 41bp 0.820722355350717 0.5037094188969 0.36259592 0.2827277 prediction 0.634025872907635 Functional Loss - CFAP57 ENSG00000243710 CDS Human protein_coding chr1:43650978 chr1:43650979 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6030 0 0 0 0 0 exosome 0.438721679730048 0.438268508704487 0 0 hPsi_site_11447 iPseU_CNN:0;iRNA_PseU:0 11448 chr9 96425230 96425230 1 + T G UCEC 96425229 + 96425209 96425249 41 TGTGCCCAACAAAGATGTGGTTCACATGCAGAATGATGTGG TGTGCCCAACAAAGATGTGGTGCACATGCAGAATGATGTGG < 41bp 0.816985647430301 0.481159185385526 0.27041528 0.22688898 prediction 0.633971294860601 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96425229 chr9:96425230 synonymous SNV . 0 22 hPsi_associated_SNPs_6031 0 0 1 0 1 chromatin 0.438718591622946 0.438718593085682 0 0 hPsi_site_11448 iPseU_CNN:0;iRNA_PseU:0 11449 chr2 37032736 37032736 1 + T G UCEC 37032735 + 37032715 37032755 41 AGAGAGTCAGGAATCAACATTTTCTTCATCACCATTGAAGG AGAGAGTCAGGAATCAACATTGTCTTCATCACCATTGAAGG < 41bp 0.838759166446613 0.521787148904071 0.4265324 0.31263927 prediction 0.633944035085084 Functional Loss - VIT ENSG00000205221 CDS Human protein_coding chr2:37032735 chr2:37032736 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6032 0 0 0 0 1 Nucleus 0.438726938687165 0.438721147213945 0 0 hPsi_site_11449 iPseU_CNN:0;iRNA_PseU:0 11450 chr8 106813335 106813335 1 + A C ESCA 106813334 + 106813314 106813354 41 TAAAATGCACCGTCTGTAGCTACACTGCTGATTCCGTGATC TAAAATGCACCGTCTGTAGCTCCACTGCTGATTCCGTGATC < 41bp 0.816965506834762 0.479985877420444 0.46372777 0.36992812 prediction 0.633931013669525 Functional Loss - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106813334 chr8:106813335 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6033 0 0 0 0 1 chromatin 0.436294930158314 0.438699702059557 0 0 hPsi_site_11450 iPseU_CNN:0;iRNA_PseU:0 11451 chr1 97235323 97235323 1 + A G rs145363773 97235322 + 97235302 97235342 41 GGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAATTAC GGATGGTGCTCCTTCTCGTGTGCTTCATATTCGAAAATTAC < 41bp 0.816933251719296 0.423092759100408 0.5046437 0.25637892 prediction 0.633866503438592 Functional Loss - PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97235322 chr1:97235323 synonymous SNV . 0 22 hPsi_associated_SNPs_6034 0 0 1 0 1 Cytosol 0.438718622277246 0.438718592792095 0.00928740000000006 0 hPsi_site_11451 iPseU_CNN:0.00928740000000006;iRNA_PseU:0 11452 chr2 132288322 132288322 1 + A C LUAD 132288321 + 132288301 132288341 41 CGTGGGCGTCTTGCGGGCGGTAGCGCCGACACTGTGCGCTC CGTGGGCGTCTTGCGGGCGGTCGCGCCGACACTGTGCGCTC < 41bp 0.879948908000961 0.563040250187883 0.7728341 0.26515692 prediction 0.633817315626157 Functional Loss - CCDC74A ENSG00000163040 CDS Human protein_coding chr2:132288321 chr2:132288322 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_6035 0 0 0 0 1 nucleolus 0.43872125627768 0.438689263824646 0.5456682 0 hPsi_site_11452 iPseU_CNN:0.5456682;iRNA_PseU:0 11453 chr17 40717259 40717259 1 + A G STAD 40717258 + 40717238 40717278 41 TCCCCAGAAGCAGCTGAAGATACTCACGGACATTATGTGGC TCCCCAGAAGCAGCTGAAGATGCTCACGGACATTATGTGGC < 41bp 0.816907284503813 0.385440852651966 0.41004053 0.2180565 prediction 0.633814569007626 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40717258 chr17:40717259 nonsynonymous SNV 0.712 0 22 hPsi_associated_SNPs_6036 0 0 1 0 1 Ribosome 0.438721961065682 0.438770419438704 0 0 hPsi_site_11453 iPseU_CNN:0;iRNA_PseU:0 11454 chr11 5730750 5730750 1 + T G UCEC 5730749 + 5730729 5730769 41 GAGGCAGGCATTGTCTCATTTTTCAATGTCACAAACCACGG GAGGCAGGCATTGTCTCATTTGTCAATGTCACAAACCACGG < 41bp 0.816907174399851 0.492509663267064 0.3535611 0.23470303 prediction 0.633814348799702 Functional Loss - TRIM22 ENSG00000132274 CDS Human protein_coding chr11:5730749 chr11:5730750 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_6037 0 0 0 0 0 Cytosol 0.438718782123697 0.439103440640915 0 0 hPsi_site_11454 iPseU_CNN:0;iRNA_PseU:0 11455 chr5 68684876 68684876 1 + A G COAD 68684875 + 68684855 68684895 41 TTTTAGAATGGAGGAAAAATTACTGTCCCTGACAAAACTTC TTTTAGAATGGAGGAAAAATTGCTGTCCCTGACAAAACTTC < 41bp 0.816905705816921 0.418963538375291 0.3509102 0.27506924 prediction 0.633811411633843 Functional Loss - RAD17 ENSG00000152942 CDS Human protein_coding chr5:68684875 chr5:68684876 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_6038 0 0 1 0 2 Cytosol 0.438718576346816 0.438718592969246 0 0 hPsi_site_11455 iPseU_CNN:0;iRNA_PseU:0 11456 chr2 149544605 149544605 1 + A G rs144317729 149544604 + 149544584 149544624 41 TTTTCCATATATTTTGAATGTATATTTCTATTTATGATACC TTTTCCATATATTTTGAATGTGTATTTCTATTTATGATACC < 41bp 0.837836881195978 0.520947695966698 0.24452132 0.21430969 prediction 0.63377837045856 Functional Loss - EPC2 ENSG00000135999 UTR3 Human protein_coding chr2:149544604 chr2:149544605 . . 0 22 hPsi_associated_SNPs_6039 0 0 1 9 0 Cytosol 0.438718498746857 0.438717125424754 0 0 hPsi_site_11456 iPseU_CNN:0;iRNA_PseU:0 11457 chr16 8738518 8738518 1 + T G OV 8738517 + 8738497 8738537 41 TCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGTGGAG TCGCAGATGGCAAGCTGCGCTGCGTGGTGGAGCCCGTGGAG < 41bp 0.816885017189521 0.477110833527724 0.92059934 0.50792265 prediction 0.633770034379041 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8738517 chr16:8738518 nonsynonymous SNV 0.587 1 22 hPsi_associated_SNPs_6040 0 0 1 0 1 Cytosol 0.438707103677973 0.438886343174264 0.82535338 0 hPsi_site_11457 iPseU_CNN:0.82535338;iRNA_PseU:0 11458 chr19 7987364 7987364 1 + T G STAD 7987363 + 7987343 7987383 41 CCTCGACCTGCTCATGTCACTTCCAGAGGAGCTGCCACTCC CCTCGACCTGCTCATGTCACTGCCAGAGGAGCTGCCACTCC < 41bp 0.829353923708107 0.512488135028419 0.43719196 0.312176 prediction 0.633731577359377 Functional Loss - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987363 chr19:7987364 synonymous SNV . 0 22 hPsi_associated_SNPs_6041 0 0 0 0 0 Ribosome 0.438715769056143 0.433625637341259 0 0 hPsi_site_11458 iPseU_CNN:0;iRNA_PseU:0 11459 chr1 152975933 152975933 1 + A G UCEC 152975932 + 152975912 152975952 41 CCAAAGTTCCTGTGCCAGGCTACACAAAGCTACCAGAGCCA CCAAAGTTCCTGTGCCAGGCTGCACAAAGCTACCAGAGCCA < 41bp 0.899197112065245 0.582332732268053 0.32695633 0.23677817 prediction 0.633728759594383 Functional Loss - SPRR3 ENSG00000163209 CDS Human protein_coding chr1:152975932 chr1:152975933 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_6042 0 0 0 0 0 exosome 0.438732967549985 0.438717482465594 0 0 hPsi_site_11459 iPseU_CNN:0;iRNA_PseU:0 11460 chr22 26887475 26887475 1 + A G UCEC 26887474 + 26887454 26887494 41 AGTTTCCTCAGACTTCACAATACATGGACATATTTAATGAT AGTTTCCTCAGACTTCACAATGCATGGACATATTTAATGAT < 41bp 0.816855406099806 0.418460409603367 0.40668094 0.23980737 prediction 0.633710812199612 Functional Loss - SRRD ENSG00000100104 CDS Human protein_coding chr22:26887474 chr22:26887475 nonsynonymous SNV 0.586 2 22 hPsi_associated_SNPs_6043 0 0 1 0 1 Ribosome 0.438203304122095 0.43786982556791 0 0 hPsi_site_11460 iPseU_CNN:0;iRNA_PseU:0 11461 chr6 17602877 17602877 1 + T G UCEC 17602876 + 17602856 17602896 41 TTTATGGCAGAGATGGTGGATTTCTTTATTCTCTTCTTTAT TTTATGGCAGAGATGGTGGATGTCTTTATTCTCTTCTTTAT < 41bp 0.83645261067386 0.519609847571136 0.36788452 0.2895802 prediction 0.633685526205448 Functional Loss - FAM8A1 ENSG00000137414 CDS Human protein_coding chr6:17602876 chr6:17602877 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6044 0 0 1 0 2 Ribosome 0.438696706834105 0.438723060753911 0 0 hPsi_site_11461 iPseU_CNN:0;iRNA_PseU:0 11462 chrX 102612717 102612717 1 + A G LUAD 102612716 + 102612696 102612736 41 GCCAGAAGAGGAGGAGAAGCTAGAGGAGGAGGCCAAAGCAA GCCAGAAGAGGAGGAGAAGCTGGAGGAGGAGGCCAAAGCAA < 41bp 0.894947745281858 0.578107708864574 0.32867962 0.21256623 prediction 0.633680072834568 Functional Loss - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612716 chrX:102612717 synonymous SNV . 0 22 hPsi_associated_SNPs_6045 0 0 1 0 0 Cytosol 0.438718898725834 0.438718674127234 0 0 hPsi_site_11462 iPseU_CNN:0;iRNA_PseU:0 11463 chr8 17819583 17819583 1 + A G UCEC 17819582 + 17819562 17819602 41 GTAACTGTCCCACCAAAAAATATATGCCAGCTGTTACTTCA GTAACTGTCCCACCAAAAAATGTATGCCAGCTGTTACTTCA < 41bp 0.816837248909613 0.416185147392978 0.3195899 0.2442263 prediction 0.633674497819225 Functional Loss - PCM1 ENSG00000078674 CDS Human protein_coding chr8:17819582 chr8:17819583 nonsynonymous SNV 0.984 1 22 hPsi_associated_SNPs_6046 0 0 1 0 1 Nucleus 0.438720635614999 0.43874398327959 0 0 hPsi_site_11463 iPseU_CNN:0;iRNA_PseU:0 11464 chr6 167438330 167438330 1 + A G LIHC 167438329 + 167438309 167438349 41 GCTCTCGGATGCACCCCCCTTAAAAAGTGGACTCAGCTCCC GCTCTCGGATGCACCCCCCTTGAAAAGTGGACTCAGCTCCC < 41bp 0.816815062034968 0.486577061233492 0.5985066 0.31545937 prediction 0.633630124069937 Functional Loss - FGFR1OP ENSG00000213066 CDS Human protein_coding chr6:167438329 chr6:167438330 synonymous SNV . 0 22 hPsi_associated_SNPs_6047 0 0 1 0 2 Ribosome 0.438718592994671 0.438718729054473 0.1970132 0 hPsi_site_11464 iPseU_CNN:0.1970132;iRNA_PseU:0 11465 chr11 66367080 66367080 1 + A G UCEC 66367079 + 66367059 66367099 41 ATGGACTCCACGTCCATCAGTACGGGGACCTTACAAACAAC ATGGACTCCACGTCCATCAGTGCGGGGACCTTACAAACAAC < 41bp 0.816800815948146 0.396643709931066 0.49282166 0.33525008 prediction 0.633601631896291 Functional Loss - CCS ENSG00000173992 CDS Human protein_coding chr11:66367079 chr11:66367080 nonsynonymous SNV 0.621 0 22 hPsi_associated_SNPs_6048 0 0 1 0 1 Ribosome 0.43861997202739 0.438714820942945 0 0 hPsi_site_11465 iPseU_CNN:0;iRNA_PseU:0 11466 chrX 100667605 100667605 1 + A G PRAD 100667604 + 100667584 100667624 41 CTATGCAGCGGCCAGGTCCCTATGATAGGCCGGGGGCTGGC CTATGCAGCGGCCAGGTCCCTGTGATAGGCCGGGGGCTGGC < 41bp 0.903454417808558 0.586669382568873 0.2831813 0.30071497 prediction 0.633570070479371 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667604 chrX:100667605 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6049 0 0 1 0 0 Cytosol 0.438723386746077 0.438730762655923 0 0 hPsi_site_11466 iPseU_CNN:0;iRNA_PseU:0 11467 chr3 127774404 127774404 1 + A C ESCA 127774403 + 127774383 127774423 41 TGGACCGCTATCACCCTCTTTATCTTCTTAGTGTGCTGCCA TGGACCGCTATCACCCTCTTTCTCTTCTTAGTGTGCTGCCA < 41bp 0.875578986561531 0.558795496824726 0.33139312 0.40514994 prediction 0.633566979473609 Functional Loss - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127774403 chr3:127774404 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_6050 0 0 1 0 2 Ribosome 0.436915588568287 0.4387338637892 0 0 hPsi_site_11467 iPseU_CNN:0;iRNA_PseU:0 11468 chr16 8722955 8722955 1 + A G HNSC 8722954 + 8722934 8722974 41 GCACAAGGCAGCCCGCACGATATCATCAGAATAGGTAAATA GCACAAGGCAGCCCGCACGATGTCATCAGAATAGGTAAATA < 41bp 0.81678172160105 0.397651719958224 0.3336111 0.22019467 prediction 0.633563443202099 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722954 chr16:8722955 nonsynonymous SNV 0.183 0 22 hPsi_associated_SNPs_6051 0 0 1 0 1 Cytosol 0.438718616693094 0.438718479469686 0 0 hPsi_site_11468 iPseU_CNN:0;iRNA_PseU:0 Multiple complex diseases 11469 chr16 30991893 30991893 1 + A G LUAD 30991892 + 30991872 30991912 41 GCTCAGCCCGCAGCGAAGGCTACTACCCCATCAGCAAGAAG GCTCAGCCCGCAGCGAAGGCTGCTACCCCATCAGCAAGAAG < 41bp 0.816749111620917 0.398388131798743 0.79429924 0.44176242 prediction 0.633498223241833 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30991892 chr16:30991893 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_6052 0 0 1 0 1 Cytosol 0.438718790792849 0.438718594188092 0.58859848 0 hPsi_site_11469 iPseU_CNN:0.58859848;iRNA_PseU:0 11470 chr1 46290161 46290161 1 + A G LUSC 46290160 + 46290140 46290180 41 GAAACTCAGTAATCCTGACATATTTTCATCCACTGGAAAAG GAAACTCAGTAATCCTGACATGTTTTCATCCACTGGAAAAG < 41bp 0.816718562402833 0.417065325943101 0.29359096 0.28060612 prediction 0.633437124805666 Functional Loss - MAST2 ENSG00000086015 CDS Human protein_coding chr1:46290160 chr1:46290161 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6053 0 0 1 0 2 Ribosome 0.437522938880946 0.439136143215575 0 0 hPsi_site_11470 iPseU_CNN:0;iRNA_PseU:0 11471 chr6 135518392 135518392 1 + A G LUSC 135518391 + 135518371 135518411 41 TGGAGACTGTAGCTCCTTCATATTTGCTGACGTCAGCAGTT TGGAGACTGTAGCTCCTTCATGTTTGCTGACGTCAGCAGTT < 41bp 0.816687750402113 0.4608149778871 0.7113708 0.39644605 prediction 0.633375500804226 Functional Loss - MYB ENSG00000118513 CDS Human protein_coding chr6:135518391 chr6:135518392 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_6054 0 0 0 0 0 Nucleus 0.437774747097368 0.435828435042616 0.4227416 0 hPsi_site_11471 iPseU_CNN:0.4227416;iRNA_PseU:0 11472 chr16 71668207 71668207 1 + A G STAD 71668206 + 71668186 71668226 41 TCACCAGCTTGGGGGGCATTTACTACTATCAGTTCGGAGGG TCACCAGCTTGGGGGGCATTTGCTACTATCAGTTCGGAGGG < 41bp 0.902161414508488 0.585488647905268 0.59812033 0.22497126 prediction 0.63334553320644 Functional Loss - MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71668206 chr16:71668207 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6055 0 0 0 0 0 Ribosome 0.438719173410492 0.43871883016731 0.19624066 0 hPsi_site_11472 iPseU_CNN:0.19624066;iRNA_PseU:0 11473 chr11 134212791 134212791 1 + A C LUAD 134212790 + 134212770 134212810 41 ATTTCCGTGTGCCCAGGGAGTACTGGAGGGACCGCCTGCTG ATTTCCGTGTGCCCAGGGAGTCCTGGAGGGACCGCCTGCTG < 41bp 0.870071972140597 0.553401770602405 0.40235224 0.15235922 prediction 0.633340403076385 Functional Loss - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134212790 chr11:134212791 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6056 0 0 0 0 1 Ribosome 0.438718577374578 0.438719158784625 0 0 hPsi_site_11473 iPseU_CNN:0;iRNA_PseU:0 11474 chr2 24920614 24920614 1 + T G UCEC 24920613 + 24920593 24920633 41 TGAGGAAGTGCATTTATGCTTTTTTCCAACCTCAGGGCAGA TGAGGAAGTGCATTTATGCTTGTTTCCAACCTCAGGGCAGA < 41bp 0.81665668004229 0.486771388461674 0.6294925 0.37169075 prediction 0.633313360084579 Functional Loss - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24920613 chr2:24920614 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6057 0 0 1 0 2 Cytosol 0.438718593005872 0.438718592687729 0.258985 0 hPsi_site_11474 iPseU_CNN:0.258985;iRNA_PseU:0 11475 chr2 168725644 168725644 1 + A G UCEC 168725643 + 168725623 168725663 41 TAACTCGCCCTACTTCTTCTTACACTGGCTCCAAACCATTC TAACTCGCCCTACTTCTTCTTGCACTGGCTCCAAACCATTC < 41bp 0.898059090536814 0.58140461420171 0.7899153 0.33269733 prediction 0.633308952670208 Functional Loss - B3GALT1 ENSG00000172318 CDS Human protein_coding chr2:168725643 chr2:168725644 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6058 0 0 0 0 0 chromatin 0.438729034024191 0.438723282007257 0.5798306 0 hPsi_site_11475 iPseU_CNN:0.5798306;iRNA_PseU:0 11476 chr6 27223364 27223364 1 + A G rs5030953 27223363 + 27223343 27223383 41 AATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTG AATGTCAAACAAATGTGACTTGTGCTGGTGCCCTCGCCCTG < 41bp 0.816651027155656 0.430134578066981 0.56924635 0.33937183 prediction 0.633302054311312 Functional Loss - PRSS16 ENSG00000112812 UTR3 Human protein_coding chr6:27223363 chr6:27223364 . . 0 22 hPsi_associated_SNPs_6059 0 0 1 3 0 Cytosol 0.43877288040553 0.438725896687247 0.1384927 0 hPsi_site_11476 iPseU_CNN:0.1384927;iRNA_PseU:0 11477 chr16 70400069 70400069 1 + T G UCEC 70400068 + 70400048 70400088 41 ACTGGTGCTCCAAGCTCAAGTTCATTGATCCCAAGAAAATC ACTGGTGCTCCAAGCTCAAGTGCATTGATCCCAAGAAAATC < 41bp 0.850021980973543 0.533401204966497 0.38499075 0.2844114 prediction 0.633241552014091 Functional Loss - DDX19A ENSG00000168872;ENSG00000260537 CDS Human other chr16:70400068 chr16:70400069 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6060 0 0 1 0 2 Ribosome 0.437778334988871 0.438584179285246 0 0 hPsi_site_11477 iPseU_CNN:0;iRNA_PseU:0 11478 chr1 95710145 95710145 1 + A G UCEC 95710144 + 95710124 95710164 41 ACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAG ACATGAGAGCAAAGACTAAATGTGTCAAAATTGTGGAGAAG < 41bp 0.878164672548393 0.561553671603408 0.28066367 0.26374292 prediction 0.63322200188997 Functional Loss - RWDD3 ENSG00000122481 CDS Human protein_coding chr1:95710144 chr1:95710145 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6061 0 0 1 1 2 Cytosol 0.434600819836714 0.436341154593882 0 0 hPsi_site_11478 iPseU_CNN:0;iRNA_PseU:0 11479 chr18 12955479 12955479 1 + A G ESCA 12955478 + 12955458 12955498 41 CCAGACACATAGTGGATCTGTATGGCGTGTGACATGGGCCC CCAGACACATAGTGGATCTGTGTGGCGTGTGACATGGGCCC < 41bp 0.816610113077269 0.399125812920563 0.691106 0.5094101 prediction 0.633220226154537 Functional Loss - SEH1L ENSG00000085415 CDS Human protein_coding chr18:12955478 chr18:12955479 synonymous SNV . 0 22 hPsi_associated_SNPs_6062 0 0 1 0 1 Ribosome 0.441469892366947 0.439750997434587 0.3633918 0 hPsi_site_11479 iPseU_CNN:0.3633918;iRNA_PseU:0 11480 chr9 139306521 139306521 1 + A G rs141168279 139306520 + 139306500 139306540 41 CATCCCCCTCTCTTCTCCCTTACCTGGAGTACCCAAGCCTG CATCCCCCTCTCTTCTCCCTTGCCTGGAGTACCCAAGCCTG < 41bp 0.816590068801963 0.41516856657044 0.34078807 0.1707584 prediction 0.633180137603926 Functional Loss - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139306520 chr9:139306521 synonymous SNV . 0 22 hPsi_associated_SNPs_6063 0 0 1 0 1 Cytosol 0.43871881743482 0.438718434724573 0 0 hPsi_site_11480 iPseU_CNN:0;iRNA_PseU:0 11481 chr4 527710 527710 1 + A G UCEC 527709 + 527689 527729 41 TCCTGACAGCGTTTGGGACGTACGCAGGGCCTGTGCTGTGG TCCTGACAGCGTTTGGGACGTGCGCAGGGCCTGTGCTGTGG < 41bp 0.816588329590333 0.391198797739508 0.65270114 0.19760156 prediction 0.633176659180666 Functional Loss - PIGG ENSG00000174227 CDS Human protein_coding chr4:527709 chr4:527710 nonsynonymous SNV 0.336 4 22 hPsi_associated_SNPs_6064 0 0 1 0 1 Nucleus 0.43871857237075 0.438718565011617 0.30540228 0 hPsi_site_11481 iPseU_CNN:0.30540228;iRNA_PseU:0 11482 chr3 73114696 73114696 1 + A G rs142951081 73114695 + 73114675 73114715 41 TCAAGCTGAGAAAGATTTGCTACATTCTGAAGGTAGTGAAA TCAAGCTGAGAAAGATTTGCTGCATTCTGAAGGTAGTGAAA < 41bp 0.888568492510925 0.571997985352419 0.417028 0.2452043 prediction 0.633141014317012 Functional Loss - PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73114695 chr3:73114696 synonymous SNV . 0 22 hPsi_associated_SNPs_6065 0 0 1 0 0 Ribosome 0.438690706231756 0.438746499268629 0 0 hPsi_site_11482 iPseU_CNN:0;iRNA_PseU:0 11483 chr1 215759913 215759913 1 + A G UCEC 215759912 + 215759892 215759932 41 GACTATCGAACGAGTAGCTTTAAATGCAAAGGTGGTTGGAG GACTATCGAACGAGTAGCTTTGAATGCAAAGGTGGTTGGAG < 41bp 0.816522733995536 0.402888882686641 0.3182717 0.21836975 prediction 0.633045467991073 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215759912 chr1:215759913 synonymous SNV . 0 22 hPsi_associated_SNPs_6066 0 0 1 0 1 Ribosome 0.438722701398624 0.438719220514058 0 0 hPsi_site_11483 iPseU_CNN:0;iRNA_PseU:0 11484 chr7 8126194 8126194 1 + A G rs12847 8126193 + 8126173 8126213 41 GGGGGAGCTGGCCTCCACCCTATGTTCCATGGATTCGGAAC GGGGGAGCTGGCCTCCACCCTGTGTTCCATGGATTCGGAAC < 41bp 0.816517827445068 0.434175282913411 0.2738421 0.28788617 prediction 0.633035654890135 Functional Loss - GLCCI1 ENSG00000106415 UTR3 Human protein_coding chr7:8126193 chr7:8126194 . . 0 22 hPsi_associated_SNPs_6067 0 0 0 0 0 Ribosome 0.438743196712464 0.438718540296209 0 0 hPsi_site_11484 iPseU_CNN:0;iRNA_PseU:0 11485 chr14 93397627 93397627 1 + A G LUSC 93397626 + 93397606 93397646 41 GAGCCATCATCCAAGGATGTTATGGAGAAAAGAGAGGATTC GAGCCATCATCCAAGGATGTTGTGGAGAAAAGAGAGGATTC < 41bp 0.816507814898873 0.404255097923137 0.531107 0.54992205 prediction 0.633015629797747 Functional Loss - CHGA ENSG00000100604 CDS Human protein_coding chr14:93397626 chr14:93397627 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_6068 0 0 0 0 1 exosome 0.438715817993532 0.438718526813722 0 0 hPsi_site_11485 iPseU_CNN:0;iRNA_PseU:0 11486 chr16 3554767 3554767 1 + A G GBM 3554766 + 3554746 3554786 41 GGATACCCTCGACATATTTCTATGGAAAATTTCCGTACACC GGATACCCTCGACATATTTCTGTGGAAAATTTCCGTACACC < 41bp 0.816501203467663 0.394574059036049 0.29174954 0.3126798 prediction 0.633002406935326 Functional Loss - CLUAP1 ENSG00000103351 CDS Human protein_coding chr16:3554766 chr16:3554767 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_6069 0 0 1 0 2 chromatin 0.438717151227353 0.438720853541517 0 0 hPsi_site_11486 iPseU_CNN:0;iRNA_PseU:0 11487 chr2 114257162 114257162 1 + A C KIRC 114257161 + 114257141 114257181 41 GGCAGCCGGCAAAGCCCCCCTACTCGTACATCGCGCTCATC GGCAGCCGGCAAAGCCCCCCTCCTCGTACATCGCGCTCATC < 41bp 0.861344732966125 0.54484397790816 0.74327064 0.22100303 prediction 0.633001510115931 Functional Loss - FOXD4L1 ENSG00000184492 CDS Human protein_coding chr2:114257161 chr2:114257162 nonsynonymous SNV 0.924 2 22 hPsi_associated_SNPs_6070 0 0 0 0 0 exosome 0.438718186053989 0.43872637601979 0.48654128 0 hPsi_site_11487 iPseU_CNN:0.48654128;iRNA_PseU:0 11488 chr20 31812206 31812206 1 + A G rs112731808 31812205 + 31812185 31812225 41 GGACTGTGGTGGGATCCAGATATCATTCCATAAGGAGTGGT GGACTGTGGTGGGATCCAGATGTCATTCCATAAGGAGTGGT < 41bp 0.906633066693078 0.590139021053061 0.65393066 0.40135384 prediction 0.632988091280034 Functional Loss - BPIFA3 ENSG00000131059 CDS Human protein_coding chr20:31812205 chr20:31812206 nonsynonymous SNV 0.866 0 22 hPsi_associated_SNPs_6071 0 0 0 0 2 unknown 0.438684887008783 0.438730919523281 0.30786132 0 hPsi_site_11488 iPseU_CNN:0.30786132;iRNA_PseU:0 11489 chr1 55075124 55075124 1 + T C BRCA 55075125 - 55075105 55075145 41 CCACAGCACAGCTGGAGCCATAGGCAGGCTGCTGGCATCCT CCACAGCACAGCTGGAGCCATGGGCAGGCTGCTGGCATCCT < 41bp 0.816492729341156 0.400910138671828 0.29992586 0.22069782 prediction 0.632985458682312 Functional Loss - FAM151A ENSG00000162391 CDS Human protein_coding chr1:55075125 chr1:55075124 nonsynonymous SNV 0.441 0 22 hPsi_associated_SNPs_6072 0 0 0 0 0 exosome 0.429924026660923 0.438775145122467 0 0 hPsi_site_11489 iPseU_CNN:0;iRNA_PseU:0 11490 chr2 24236185 24236185 1 + A G LIHC 24236184 + 24236164 24236204 41 GCCGGTCGCCTCTCATTCTGTACAAAGGTGTGCTATGGCAT GCCGGTCGCCTCTCATTCTGTGCAAAGGTGTGCTATGGCAT < 41bp 0.816481053776076 0.392314178037098 0.33372957 0.26740184 prediction 0.632962107552152 Functional Loss - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24236184 chr2:24236185 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_6073 0 0 1 0 2 Endoplasmic reticulum 0.438673966738395 0.438706794811081 0 0 hPsi_site_11490 iPseU_CNN:0;iRNA_PseU:0 11491 chr22 50316935 50316935 1 + A G UCEC 50316934 + 50316914 50316954 41 TGCAGCGCTGCGCAGTTCTGTAAGAACGCCAACGGCTCCTA TGCAGCGCTGCGCAGTTCTGTGAGAACGCCAACGGCTCCTA < 41bp 0.901587827032461 0.585117580897291 0.7303132 0.35471892 prediction 0.632940492270339 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50316934 chr22:50316935 nonsynonymous SNV 0.075 1 22 hPsi_associated_SNPs_6074 0 0 1 0 2 Ribosome 0.439426022095279 0.438715899099318 0.4606264 0 hPsi_site_11491 iPseU_CNN:0.4606264;iRNA_PseU:0 11492 chr2 70502747 70502747 1 + A G rs72904344 70502746 + 70502726 70502766 41 CAGGCATCCAAAAGCAATCTTATATCTGGCTCAGTAATGTA CAGGCATCCAAAAGCAATCTTGTATCTGGCTCAGTAATGTA < 41bp 0.816467663450521 0.391806814123533 0.20706987 0.18253216 prediction 0.632935326901041 Functional Loss - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70502746 chr2:70502747 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6075 0 0 1 0 1 Ribosome 0.438640633985257 0.43868609310446 0 0 hPsi_site_11492 iPseU_CNN:0;iRNA_PseU:0 11493 chr11 67160162 67160162 1 + A G BLCA 67160161 + 67160141 67160181 41 TGAACTCCTCCCGCTCTGCCTATGCCTGCTTTCTCTTTGCC TGAACTCCTCCCGCTCTGCCTGTGCCTGCTTTCTCTTTGCC < 41bp 0.908875567324847 0.592417280127769 0.59643114 0.2805322 prediction 0.632916574394156 Functional Loss - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160161 chr11:67160162 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6076 0 0 1 0 2 nucleus 0.438718516555123 0.438718692979095 0.19286228 0 hPsi_site_11493 iPseU_CNN:0.19286228;iRNA_PseU:0 11494 chr2 95846958 95846958 1 + A G STAD 95846957 + 95846937 95846977 41 TGTCCTAAATTTGAAGTTCATACACCCAATGGCAGGATGGG TGTCCTAAATTTGAAGTTCATGCACCCAATGGCAGGATGGG < 41bp 0.816438107225898 0.416109982636735 0.41725534 0.23536754 prediction 0.632876214451795 Functional Loss - ZNF2 ENSG00000163067 CDS Human other chr2:95846957 chr2:95846958 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_6077 0 0 0 0 0 chromatin 0.438718533802385 0.438718592537669 0 0 hPsi_site_11494 iPseU_CNN:0;iRNA_PseU:0 11495 chr6 127471624 127471624 1 + A C STAD 127471623 + 127471603 127471643 41 AAAAATTTCTGCACAAAATGTAAAAGTGGATTTTACTTACA AAAAATTTCTGCACAAAATGTCAAAGTGGATTTTACTTACA < 41bp 0.816428319133002 0.454998288937502 0.2249304 0.18015057 prediction 0.632856638266003 Functional Loss - RSPO3 ENSG00000146374 CDS Human protein_coding chr6:127471623 chr6:127471624 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6078 0 0 0 0 2 exosome 0.438715137258052 0.438718419225378 0 0 hPsi_site_11495 iPseU_CNN:0;iRNA_PseU:0 11496 chr4 6304469 6304469 1 + A G rs1046325 6304468 + 6304448 6304488 41 GTGACATGGGTGTGCCAGGCTAGACTAGGAGGTTCCGGTGT GTGACATGGGTGTGCCAGGCTGGACTAGGAGGTTCCGGTGT < 41bp 0.816404783611291 0.437420103225079 0.3667845 0.2740463 prediction 0.632809567222582 Functional Loss - WFS1 ENSG00000109501 UTR3 Human protein_coding chr4:6304468 chr4:6304469 . . 0 22 hPsi_associated_SNPs_6079 2 0 1 1 0 nucleus 0.438595328551732 0.43871859309384 0 0 hPsi_site_11496 iPseU_CNN:0;iRNA_PseU:0 11497 chr17 61613115 61613115 1 + A G KIRP 61613114 + 61613094 61613134 41 AGCTGGACCGCTACTCTGAGTATGGGGCGGCTGTGCTCTTC AGCTGGACCGCTACTCTGAGTGTGGGGCGGCTGTGCTCTTC < 41bp 0.816400467666119 0.379233920651641 0.80846864 0.6657219 prediction 0.632800935332239 Functional Loss - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61613114 chr17:61613115 nonsynonymous SNV 0.948 4 22 hPsi_associated_SNPs_6080 0 0 0 0 2 unknown 0.438718398921904 0.438718655847626 0.28549348 0 hPsi_site_11497 iPseU_CNN:0.28549348;iRNA_PseU:0 11498 chr7 12728013 12728013 1 + T G UCEC 12728012 + 12727992 12728032 41 ACAGGCTGCAGTTCAATGAATTTGTAAATACCGTACCTACC ACAGGCTGCAGTTCAATGAATGTGTAAATACCGTACCTACC < 41bp 0.816398776393882 0.493464235862901 0.37020862 0.27251583 prediction 0.632797552787763 Functional Loss - ARL4A ENSG00000122644 CDS Human protein_coding chr7:12728012 chr7:12728013 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6081 0 0 0 0 0 Cytosol 0.438718595834147 0.438724183495545 0 0 hPsi_site_11498 iPseU_CNN:0;iRNA_PseU:0 Pseudohypoaldosteronism, Type I, Dominant Pseudohypoaldosteronism, Type I, Dominant 11499 chrX 151092696 151092696 1 + A G LUSC 151092695 + 151092675 151092715 41 TCACCTGCCTGGGCCTTTCCTATGATGGCCTGCTGGGTAAT TCACCTGCCTGGGCCTTTCCTGTGATGGCCTGCTGGGTAAT < 41bp 0.816396637753592 0.400138837320884 0.26781428 0.2347542 prediction 0.632793275507183 Functional Loss - MAGEA4 ENSG00000147381 CDS Human protein_coding chrX:151092695 chrX:151092696 nonsynonymous SNV 0.041 1 22 hPsi_associated_SNPs_6082 0 0 0 0 0 unknown 0.438718592994868 0.438718591588941 0 0 hPsi_site_11499 iPseU_CNN:0;iRNA_PseU:0 Pseudohypoaldosteronism, Type I, Dominant Pseudohypoaldosteronism, Type I, Dominant 11500 chr20 37203564 37203564 1 + A G STAD 37203563 + 37203543 37203583 41 AGCAGCTGGAGCCAGAGTTTTATACTTCACTTTTCCAGGAG AGCAGCTGGAGCCAGAGTTTTGTACTTCACTTTTCCAGGAG < 41bp 0.869089356944619 0.552709127766095 0.66774845 0.45372102 prediction 0.632760458357048 Functional Loss - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37203563 chr20:37203564 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6083 0 0 1 0 1 Nucleus 0.438401838554666 0.415768481449581 0.3354969 0 hPsi_site_11500 iPseU_CNN:0.3354969;iRNA_PseU:0 Pseudohypoaldosteronism, Type I, Dominant Pseudohypoaldosteronism, Type I, Dominant 11501 chr17 41347008 41347008 1 + A G HNSC 41347007 + 41346987 41347027 41 CTGTCCTTTGAGCTGTTGGATATAAACATTGTTCAAGAGTT CTGTCCTTTGAGCTGTTGGATGTAAACATTGTTCAAGAGTT < 41bp 0.816369731974973 0.400262589844095 0.39279482 0.22908166 prediction 0.632739463949946 Functional Loss - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41347007 chr17:41347008 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6084 0 0 1 1 2 Cytosol 0.438818666857645 0.438782994197561 0 0 hPsi_site_11501 iPseU_CNN:0;iRNA_PseU:0 11502 chr15 76630302 76630302 1 + A G PAAD 76630301 + 76630281 76630321 41 AGACCTACTGCAAGCGGGACTATGTCAGGTGAGGCCGGCGG AGACCTACTGCAAGCGGGACTGTGTCAGGTGAGGCCGGCGG < 41bp 0.81635388486325 0.409500263500442 0.37501216 0.30640587 prediction 0.6327077697265 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630301 chr15:76630302 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_6085 0 0 1 0 1 Cytosol 0.438792752636212 0.438715578728538 0 0 hPsi_site_11502 iPseU_CNN:0;iRNA_PseU:0 11503 chr20 33764075 33764075 1 + T G READ 33764074 + 33764054 33764094 41 AATGGGAGCTCCTTTGTGAGTTTCCGGCCGGAGAGAGCCTT AATGGGAGCTCCTTTGTGAGTGTCCGGCCGGAGAGAGCCTT < 41bp 0.816336424471664 0.482785309314245 0.27829504 0.23106101 prediction 0.632672848943327 Functional Loss - PROCR ENSG00000101000 CDS Human protein_coding chr20:33764074 chr20:33764075 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_6086 0 0 1 0 0 Endoplasmic reticulum 0.438718592995141 0.438715769707532 0 0 hPsi_site_11503 iPseU_CNN:0;iRNA_PseU:0 Retinitis Pigmentosa, Dominant Retinitis Pigmentosa, Dominant 11504 chr3 178951992 178951992 1 + T G UCEC 178951991 + 178951971 178952011 41 GAATGCCAGAACTACAATCTTTTGATGACATTGCATACATT GAATGCCAGAACTACAATCTTGTGATGACATTGCATACATT < 41bp 0.816333874158377 0.492398715659199 0.37495637 0.25120986 prediction 0.632667748316754 Functional Loss - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178951991 chr3:178951992 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6087 0 0 1 0 0 Ribosome 0.438581812240544 0.438170239292775 0 0 hPsi_site_11504 iPseU_CNN:0;iRNA_PseU:0 11505 chr7 123269182 123269182 1 + A G UCEC 123269181 + 123269161 123269201 41 TGCAGGTGCAGACCCAAACTTAGATCCCCTCAACTGTCTAC TGCAGGTGCAGACCCAAACTTGGATCCCCTCAACTGTCTAC < 41bp 0.816331153577528 0.390635998826691 0.76137984 0.36641574 prediction 0.632662307155057 Functional Loss - ASB15 ENSG00000146809 CDS Human protein_coding chr7:123269181 chr7:123269182 synonymous SNV . 0 22 hPsi_associated_SNPs_6088 0 0 0 0 0 exosome 0.438718945807889 0.438718594160895 0.52275968 0 hPsi_site_11505 iPseU_CNN:0.52275968;iRNA_PseU:0 Amyotrophic Lateral Sclerosis, Dominant Amyotrophic Lateral Sclerosis, Dominant 11506 chr19 54445312 54445312 1 + A G UCEC 54445311 + 54445291 54445331 41 GGGCCGGCGTGATGTCCGTGTACCTGTTCACCAAGCGCTAC GGGCCGGCGTGATGTCCGTGTGCCTGTTCACCAAGCGCTAC < 41bp 0.907217043710714 0.590889177162331 0.8408618 0.33850265 prediction 0.632655733096767 Functional Loss - CACNG7 ENSG00000105605 CDS Human protein_coding chr19:54445311 chr19:54445312 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6089 0 0 0 0 1 unknown 0.440323698925408 0.428642776131099 0.6817236 0 hPsi_site_11506 iPseU_CNN:0.6817236;iRNA_PseU:0 11507 chrX 57162490 57162490 1 + A C UCEC 57162491 - 57162471 57162511 41 ATGTACCAGCTTCTAGATGATTATAAGGAAGGTGACCTCCG ATGTACCAGCTTCTAGATGATGATAAGGAAGGTGACCTCCG < 41bp 0.825784903531951 0.509471068243037 0.6412188 0.33293903 prediction 0.632627670577827 Functional Loss - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162491 chrX:57162490 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_6090 0 0 0 0 0 exosome 0.438723141396137 0.438692313910485 0.2824376 0 hPsi_site_11507 iPseU_CNN:0.2824376;iRNA_PseU:0 11508 chrX 44703749 44703749 1 + A G UCEC 44703748 + 44703728 44703768 41 GCCTTGCGTACCTCATGAAATACCACTCCATGTCGCTGCTG GCCTTGCGTACCTCATGAAATGCCACTCCATGTCGCTGCTG < 41bp 0.900979641615435 0.584666406000053 0.6226749 0.4123821 prediction 0.632626471230764 Functional Loss - DUSP21 ENSG00000189037 CDS Human protein_coding chrX:44703748 chrX:44703749 nonsynonymous SNV 0.957 4 22 hPsi_associated_SNPs_6091 0 0 0 0 0 exosome 0.438717776065763 0.438718593164248 0.2453498 0 hPsi_site_11508 iPseU_CNN:0.2453498;iRNA_PseU:0 11509 chr19 13988331 13988331 1 + A G UCEC 13988330 + 13988310 13988350 41 ACGGCGAGTCCCGGGCCATCTACCAGTCCCACGTGCTGAAG ACGGCGAGTCCCGGGCCATCTGCCAGTCCCACGTGCTGAAG < 41bp 0.904119076818052 0.587806663175306 0.45245343 0.18162185 prediction 0.632624827285491 Functional Loss - NANOS3 ENSG00000187556 CDS Human protein_coding chr19:13988330 chr19:13988331 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6092 0 0 0 0 0 exosome 0.437890610589464 0.43786571649932 0 0 hPsi_site_11509 iPseU_CNN:0;iRNA_PseU:0 11510 chr1 158449814 158449814 1 + A G LGG 158449813 + 158449793 158449833 41 AATTCAGCTGGCCCTCTTTGTAGTTTTTCTTTTTCTGTATC AATTCAGCTGGCCCTCTTTGTGGTTTTTCTTTTTCTGTATC < 41bp 0.816305653102055 0.434181138674 0.4411383 0.24653876 prediction 0.63261130620411 Functional Loss - OR10R2 ENSG00000198965 CDS Human protein_coding chr1:158449813 chr1:158449814 synonymous SNV . 0 22 hPsi_associated_SNPs_6093 0 0 0 0 0 unknown 0.438826991683465 0.438718592187093 0 0 hPsi_site_11510 iPseU_CNN:0;iRNA_PseU:0 11511 chr4 57314704 57314704 1 + A G COAD 57314703 + 57314683 57314723 41 ATGAGTCATGCTACACAGGCTATATTTGAAATACTGGAGAA ATGAGTCATGCTACACAGGCTGTATTTGAAATACTGGAGAA < 41bp 0.902792352665663 0.586496115603527 0.19120571 0.15527895 prediction 0.632592474124273 Functional Loss - PAICS ENSG00000128050 CDS Human protein_coding chr4:57314703 chr4:57314704 nonsynonymous SNV 0.928 0 22 hPsi_associated_SNPs_6094 0 0 1 0 1 Ribosome 0.438720624029727 0.438729411363808 0 0 hPsi_site_11511 iPseU_CNN:0;iRNA_PseU:0 Asparaginase-induced acute pancreatitis in acute lymphoblastic leukemia (onset time) 11512 chr14 69922551 69922551 1 + A G UCEC 69922550 + 69922530 69922570 41 TTTGCATTGGCAGCACCAGTTATGTCCATGGTGACATACTT TTTGCATTGGCAGCACCAGTTGTGTCCATGGTGACATACTT < 41bp 0.90479462629338 0.588512053504505 0.5693821 0.2584588 prediction 0.63256514557775 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69922550 chr14:69922551 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6095 0 0 1 1 1 Ribosome 0.438623538976683 0.438593693222933 0.1387642 0 hPsi_site_11512 iPseU_CNN:0.1387642;iRNA_PseU:0 11513 chr8 1639768 1639768 1 + T G UCEC 1639767 + 1639747 1639787 41 GTCCCAGAAATTCCAGCAGTTTTATTGGCTTTGCCAACAGA GTCCCAGAAATTCCAGCAGTTGTATTGGCTTTGCCAACAGA < 41bp 0.816273265827169 0.499033466416358 0.74338937 0.6476935 prediction 0.632546531654338 Functional Loss - DLGAP2 ENSG00000198010 CDS Human protein_coding chr8:1639767 chr8:1639768 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6096 0 0 0 0 2 nucleolus 0.438717374428383 0.43871863039489 0.19139174 0 hPsi_site_11513 iPseU_CNN:0.19139174;iRNA_PseU:0 11514 chr4 494296 494296 1 + T G COAD 494295 + 494275 494315 41 TTGGGTCAAAGGGTGTGAAATTTATGCCCTACACAACTTAC TTGGGTCAAAGGGTGTGAAATGTATGCCCTACACAACTTAC < 41bp 0.841162752114172 0.524920284610604 0.43995154 0.3363201 prediction 0.632484935007136 Functional Loss - PIGG ENSG00000174227 CDS Human protein_coding chr4:494295 chr4:494296 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6097 0 0 1 1 1 Nucleus 0.438719385078446 0.435966717769988 0 0 hPsi_site_11514 iPseU_CNN:0;iRNA_PseU:0 11515 chr18 19080524 19080524 1 + A G UCEC 19080523 + 19080503 19080543 41 GGGAAAGACGGGCTCCTATTTACAGTTCCTCAGGATCCTCT GGGAAAGACGGGCTCCTATTTGCAGTTCCTCAGGATCCTCT < 41bp 0.816234789414363 0.397191116186467 0.6741122 0.42034772 prediction 0.632469578828726 Functional Loss - GREB1L ENSG00000141449 CDS Human protein_coding chr18:19080523 chr18:19080524 synonymous SNV . 0 22 hPsi_associated_SNPs_6098 0 0 0 0 2 Nucleus 0.438698529699846 0.438718598547842 0.3482244 0 hPsi_site_11515 iPseU_CNN:0.3482244;iRNA_PseU:0 11516 chr5 79378945 79378945 1 + T G STAD 79378944 + 79378924 79378964 41 AAGAGTTTCAAACCCAGAATTTCGACCGCTTCGATAATTAA AAGAGTTTCAAACCCAGAATTGCGACCGCTTCGATAATTAA < 41bp 0.816218639980821 0.498810880008592 0.7496904 0.26832557 prediction 0.632437279961641 Functional Loss - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79378944 chr5:79378945 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6099 0 0 0 0 1 exosome 0.438718576499296 0.438724084621162 0.4993808 0 hPsi_site_11516 iPseU_CNN:0.4993808;iRNA_PseU:0 11517 chr5 133896507 133896507 1 + A G HNSC 133896506 + 133896486 133896526 41 GAGACCCTGTGCCACCAGAATATGGCCAGGGCCATTGAGAC GAGACCCTGTGCCACCAGAATGTGGCCAGGGCCATTGAGAC < 41bp 0.816215869919308 0.385051547900427 0.42455727 0.28414023 prediction 0.632431739838617 Functional Loss - JADE2 ENSG00000043143 CDS Human protein_coding chr5:133896506 chr5:133896507 nonsynonymous SNV 0.640 2 22 hPsi_associated_SNPs_6100 0 0 0 0 1 Cytosol 0.438718592993999 0.438718592697247 0 0 hPsi_site_11517 iPseU_CNN:0;iRNA_PseU:0 11518 chr10 118310677 118310677 1 + A G UCEC 118310676 + 118310656 118310696 41 AAGGTGGCTCCCGAACTGGATACACACAAGCCTCGCAGAAC AAGGTGGCTCCCGAACTGGATGCACACAAGCCTCGCAGAAC < 41bp 0.910310924926996 0.594123768189249 0.91631585 0.38701734 prediction 0.632374313475495 Functional Loss - PNLIP ENSG00000175535 CDS Human protein_coding chr10:118310676 chr10:118310677 nonsynonymous SNV 0.916 5 22 hPsi_associated_SNPs_6101 0 0 0 0 2 unknown 0.438908501535019 0.447423054142613 0.8326317 0 hPsi_site_11518 iPseU_CNN:0.8326317;iRNA_PseU:0 11519 chr9 77300445 77300445 1 + A G STAD 77300444 + 77300424 77300464 41 GGGGAGAAGCTGCAGGTATTTAAGCAATCTCATCCAGAGAT GGGGAGAAGCTGCAGGTATTTGAGCAATCTCATCCAGAGAT < 41bp 0.816177665752312 0.417204881300332 0.361471 0.20688185 prediction 0.632355331504624 Functional Loss - RORB ENSG00000198963 CDS Human protein_coding chr9:77300444 chr9:77300445 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6102 0 0 0 0 1 exosome 0.438718593607754 0.4387185929951 0 0 hPsi_site_11519 iPseU_CNN:0;iRNA_PseU:0 11520 chr6 89868113 89868113 1 + A G LUAD 89868112 + 89868092 89868132 41 AAGAGCCTATGGAAAGCCTATATGGAAAATGGAAGAAAGCT AAGAGCCTATGGAAAGCCTATGTGGAAAATGGAAGAAAGCT < 41bp 0.816171935669017 0.416829709065362 0.23077762 0.22949395 prediction 0.632343871338034 Functional Loss - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89868112 chr6:89868113 nonsynonymous SNV 0.815 0 22 hPsi_associated_SNPs_6103 0 0 1 0 2 Ribosome 0.438718592995726 0.438718592992463 0 0 hPsi_site_11520 iPseU_CNN:0;iRNA_PseU:0 11521 chr17 45750422 45750422 1 + A G BLCA 45750421 + 45750401 45750441 41 ACAACCTGAGGAGTTCTGCATATGAATCTCTGATGGAAATT ACAACCTGAGGAGTTCTGCATGTGAATCTCTGATGGAAATT < 41bp 0.816152861966332 0.392428525923598 0.3734666 0.24582681 prediction 0.632305723932665 Functional Loss - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45750421 chr17:45750422 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6104 0 0 1 0 1 Cytosol 0.439161063249624 0.438797333213453 0 0 hPsi_site_11521 iPseU_CNN:0;iRNA_PseU:0 11522 chr2 85981528 85981528 1 + A C rs60333657 85981527 + 85981507 85981547 41 TCGGCTGCAGCCGGTCCCGGTACCGGTGCCGGTGCCAGTCC TCGGCTGCAGCCGGTCCCGGTCCCGGTGCCGGTGCCAGTCC < 41bp 0.877656972871558 0.561509791622521 0.9775965 0.5033505 prediction 0.632294362498074 Functional Loss - ATOH8 ENSG00000168874 CDS Human protein_coding chr2:85981527 chr2:85981528 synonymous SNV . 0 22 hPsi_associated_SNPs_6105 0 0 0 0 0 nucleus 0.432409206760491 0.438725974040183 0.948492 0 hPsi_site_11522 iPseU_CNN:0.948492;iRNA_PseU:0 11523 chr7 39610125 39610125 1 + A G ESCA 39610124 + 39610104 39610144 41 GGAAGGTTATAGAGATGGAATAGATGCTGGCAAAGCAGTTA GGAAGGTTATAGAGATGGAATGGATGCTGGCAAAGCAGTTA < 41bp 0.816145817446006 0.407223508252562 0.23110989 0.20439965 prediction 0.632291634892013 Functional Loss - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39610124 chr7:39610125 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6106 0 0 1 0 1 Ribosome 0.438718422986855 0.438718591940014 0 0 hPsi_site_11523 iPseU_CNN:0;iRNA_PseU:0 11524 chr17 34901647 34901647 1 + A G rs575661510 34901646 + 34901626 34901666 41 AGAGGAGGCAGATTCCCCTCTACATAGACGACACCCTGACG AGAGGAGGCAGATTCCCCTCTGCATAGACGACACCCTGACG < 41bp 0.816144497114004 0.419944035426966 0.5759911 0.29321513 prediction 0.632288994228008 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34901646 chr17:34901647 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6107 0 0 1 0 1 Nucleus 0.438718719630116 0.438718664377168 0.1519822 0 hPsi_site_11524 iPseU_CNN:0.1519822;iRNA_PseU:0 11525 chr6 41060751 41060751 1 + A G DLBC 41060750 + 41060730 41060770 41 TCTACGTGAATGCCAAACAATACCACCGTATTCTTAAGAGG TCTACGTGAATGCCAAACAATGCCACCGTATTCTTAAGAGG < 41bp 0.816120443219045 0.391097416014341 0.34287468 0.29115915 prediction 0.632240886438091 Functional Loss - NFYA ENSG00000001167 CDS Human protein_coding chr6:41060750 chr6:41060751 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6108 0 0 1 0 0 Cytosol 0.438718258226997 0.438718591947119 0 0 hPsi_site_11525 iPseU_CNN:0;iRNA_PseU:0 11526 chr15 25434631 25434631 1 + A G LUSC 25434630 + 25434610 25434650 41 AAAATCATGCTCAATAGGATTACGCTGAGGCCCAGCTTAGG AAAATCATGCTCAATAGGATTGCGCTGAGGCCCAGCTTAGG < 41bp 0.816117427048013 0.478679604381367 0.68338215 0.23673585 prediction 0.632234854096026 Functional Loss - SNORD115-11;SNORD115-29;SNORD115-36;SNORD115-43 ENSG00000200486 ncRNA_exonic Human snoRNA chr15:25434630 chr15:25434631 . . 0 22 hPsi_associated_SNPs_6109 0 0 0 0 0 unknown 0.438718603480168 0.438719391406128 0.3667643 0 hPsi_site_11526 iPseU_CNN:0.3667643;iRNA_PseU:0 Knobloch syndrome 1 Knobloch syndrome 1 11527 chr13 78318459 78318459 1 + A G LUAD 78318458 + 78318438 78318478 41 CCACTCAGTCCCCAGTCATCTATCGACAGTGAGCTGAGTAC CCACTCAGTCCCCAGTCATCTGTCGACAGTGAGCTGAGTAC < 41bp 0.816114285276803 0.384232125972993 0.293801 0.20917255 prediction 0.632228570553605 Functional Loss - SLAIN1 ENSG00000139737 CDS Human protein_coding chr13:78318458 chr13:78318459 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_6110 0 0 1 0 1 exosome 0.436456579087036 0.435814605634174 0 0 hPsi_site_11527 iPseU_CNN:0;iRNA_PseU:0 Knobloch syndrome 1 Knobloch syndrome 1 11528 chr11 101985054 101985054 1 + A G UCEC 101985053 + 101985033 101985073 41 TCGACAGTCTTCTTTTGAGATACCTGATGATGTACCTCTGC TCGACAGTCTTCTTTTGAGATGCCTGATGATGTACCTCTGC < 41bp 0.816112987353241 0.402444252691601 0.54817945 0.28366083 prediction 0.632225974706481 Functional Loss - YAP1 ENSG00000137693 CDS Human protein_coding chr11:101985053 chr11:101985054 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6111 0 0 1 0 1 Ribosome 0.43850825853343 0.436738087051787 0.0963589 0 hPsi_site_11528 iPseU_CNN:0.0963589;iRNA_PseU:0 11529 chr1 155695273 155695273 1 + A G COAD 155695272 + 155695252 155695292 41 TTGCTTATCCAGCTATACGATATCTTCTGTGTATCCTTTCC TTGCTTATCCAGCTATACGATGTCTTCTGTGTATCCTTTCC < 41bp 0.816059914012613 0.399640636102074 0.65700185 0.5103837 prediction 0.632119828025226 Functional Loss - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155695272 chr1:155695273 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_6112 0 0 1 0 1 chromatin 0.438523294274735 0.438710952257327 0.2932363 0 hPsi_site_11529 iPseU_CNN:0.2932363;iRNA_PseU:0 11530 chr4 187003852 187003852 1 + A C UCEC 187003851 + 187003831 187003871 41 CGGTCTTTTACTAAACAAAGTATTTCCCTTGCCTCACTCCC CGGTCTTTTACTAAACAAAGTCTTTCCCTTGCCTCACTCCC < 41bp 0.816049608602742 0.451675024809373 0.43230876 0.2994573 prediction 0.632099217205484 Functional Loss - TLR3 ENSG00000164342 CDS Human protein_coding chr4:187003851 chr4:187003852 nonsynonymous SNV 0.659 0 22 hPsi_associated_SNPs_6113 0 0 0 0 0 exosome 0.438718594325473 0.438718594087241 0 0 hPsi_site_11530 iPseU_CNN:0;iRNA_PseU:0 11531 chr9 97317609 97317609 1 + A G rs192965444 97317608 + 97317588 97317628 41 GAGGGGTAGGAAGAAGAAGATAGTTTTGGGATAGATAGAGG GAGGGGTAGGAAGAAGAAGATGGTTTTGGGATAGATAGAGG < 41bp 0.81603287306618 0.443309510513088 0.28915542 0.21491066 prediction 0.63206574613236 Functional Loss - PCAT7 ENSG00000231806 ncRNA_intronic Human antisense chr9:97317608 chr9:97317609 . . 0 22 hPsi_associated_SNPs_6114 0 0 0 0 1 unknown 0.438718593023837 0.438718592995104 0 0 hPsi_site_11531 iPseU_CNN:0;iRNA_PseU:0 11532 chr4 95202640 95202640 1 + A G rs145680198 95202639 + 95202619 95202659 41 ACAGGGTGATAGAGTTGTGTTATTTAGCCAATTTACCATGA ACAGGGTGATAGAGTTGTGTTGTTTAGCCAATTTACCATGA < 41bp 0.816022153100955 0.420507415269919 0.33998567 0.2939927 prediction 0.63204430620191 Functional Loss - SMARCAD1 ENSG00000163104 CDS Human protein_coding chr4:95202639 chr4:95202640 synonymous SNV . 0 22 hPsi_associated_SNPs_6115 0 0 1 0 0 Nucleus 0.438717688935505 0.43871861106869 0 0 hPsi_site_11532 iPseU_CNN:0;iRNA_PseU:0 11533 chr9 139873740 139873740 1 + A G UCEC 139873739 + 139873719 139873759 41 GGTCCCTCGGCTCCTACAGCTACCGGAGTCCCCGTGAGTGG GGTCCCTCGGCTCCTACAGCTGCCGGAGTCCCCGTGAGTGG < 41bp 0.900618870620532 0.584635182009057 0.61206234 0.41753033 prediction 0.631967377222949 Functional Loss - PTGDS ENSG00000107317 CDS Human protein_coding chr9:139873739 chr9:139873740 nonsynonymous SNV 0.242 3 22 hPsi_associated_SNPs_6116 0 0 1 0 2 exosome 0.438719518191771 0.438718734758863 0.22412468 0 hPsi_site_11533 iPseU_CNN:0.22412468;iRNA_PseU:0 11534 chr13 100207847 100207847 1 + T G SKCM 100207846 + 100207826 100207866 41 TCTGGTGTTTATCATTTTGGTTATTACCTGTTCTGAAGCAA TCTGGTGTTTATCATTTTGGTGATTACCTGTTCTGAAGCAA < 41bp 0.830471822648452 0.514513948966967 0.30872285 0.2076467 prediction 0.631915747362969 Functional Loss - TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100207846 chr13:100207847 synonymous SNV . 0 22 hPsi_associated_SNPs_6117 0 0 1 0 2 Nucleus 0.438831447676479 0.439182791299095 0 0 hPsi_site_11534 iPseU_CNN:0;iRNA_PseU:0 11535 chr1 95712368 95712368 1 + T G SKCM 95712367 + 95712347 95712387 41 TGGATGAATTACAAAAGGAATTTGAAACTGCAGGACTTAAG TGGATGAATTACAAAAGGAATGTGAAACTGCAGGACTTAAG < 41bp 0.815955108657331 0.499107541181136 0.44975665 0.54994655 prediction 0.631910217314663 Functional Loss - RWDD3 ENSG00000122481;ENSG00000271092 CDS Human other chr1:95712367 chr1:95712368 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_6118 0 0 1 2 1 Cytosol 0.438718595747706 0.438639715364723 0 0 hPsi_site_11535 iPseU_CNN:0;iRNA_PseU:0 11536 chr4 103516052 103516052 1 + A C READ 103516051 + 103516031 103516071 41 TTTTACTTGCCGTTTCAGGGTATAGCTTCCCACACTATGGA TTTTACTTGCCGTTTCAGGGTCTAGCTTCCCACACTATGGA < 41bp 0.815935740794944 0.453831555057018 0.33718556 0.22710979 prediction 0.631871481589889 Functional Loss - NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103516051 chr4:103516052 nonsynonymous SNV 0.345 1 22 hPsi_associated_SNPs_6119 0 0 0 0 1 Ribosome 0.438718541959949 0.438718568949937 0 0 hPsi_site_11536 iPseU_CNN:0;iRNA_PseU:0 11537 chr7 7634693 7634693 1 + T G UCEC 7634692 + 7634672 7634712 41 ATTTATTAGATGCCTGGAGGTTTTGGCATAAACGAGCTGAA ATTTATTAGATGCCTGGAGGTGTTGGCATAAACGAGCTGAA < 41bp 0.835903762342957 0.519974008586263 0.29187006 0.24575096 prediction 0.631859507513388 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7634692 chr7:7634693 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6120 0 0 0 0 1 Nucleus 0.438715850005017 0.438718877186695 0 0 hPsi_site_11537 iPseU_CNN:0;iRNA_PseU:0 Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome 11538 chr21 32007602 32007602 1 + A G LUAD 32007601 + 32007581 32007621 41 CCATGTGCTACTACAGCAACTACTATGGTGGTCTGCGTTAT CCATGTGCTACTACAGCAACTGCTATGGTGGTCTGCGTTAT < 41bp 0.815911035654054 0.45545724777329 0.30548155 0.22861376 prediction 0.631822071308109 Functional Loss - KRTAP20-2 ENSG00000184032 CDS Human protein_coding chr21:32007601 chr21:32007602 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_6121 0 0 0 0 0 unknown 0.441304938236592 0.43832163399329 0 0 hPsi_site_11538 iPseU_CNN:0;iRNA_PseU:0 Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome Cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome 11539 chr16 2015504 2015504 1 + A G rs561590673 2015503 + 2015483 2015523 41 TCAAATAAAGCTGTTTTGTCTAACTCACTGCATGCGGGTGT TCAAATAAAGCTGTTTTGTCTGACTCACTGCATGCGGGTGT < 41bp 0.886431741522357 0.570536097345627 0.51986325 0.30006915 prediction 0.63179128835346 Functional Loss - SNHG9 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015503 chr16:2015504 . . 0 22 hPsi_associated_SNPs_6122 0 0 1 0 1 unknown 0.438717981037489 0.438063425397676 0.0397265 0 hPsi_site_11539 iPseU_CNN:0.0397265;iRNA_PseU:0 11540 chr12 6494275 6494275 1 + A G UCEC 6494274 + 6494254 6494294 41 CCTACAACGAGCACTGGAACTACCTGACCATCTGCCAGCTG CCTACAACGAGCACTGGAACTGCCTGACCATCTGCCAGCTG < 41bp 0.815858370191515 0.387649480236785 0.91433305 0.30880195 prediction 0.631716740383029 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6494274 chr12:6494275 nonsynonymous SNV 0.431 2 22 hPsi_associated_SNPs_6123 0 0 1 0 3 Endoplasmic reticulum 0.438767791952318 0.438716608995627 0.8286661 0 hPsi_site_11540 iPseU_CNN:0.8286661;iRNA_PseU:0 11541 chr3 141535695 141535695 1 + T G UCEC 141535694 + 141535674 141535714 41 GACATCGCTGAAATTGATGATTTCTCTGAGGTTCGGGGGGT GACATCGCTGAAATTGATGATGTCTCTGAGGTTCGGGGGGT < 41bp 0.815857843541685 0.492216287929605 0.6864805 0.4509257 prediction 0.631715687083369 Functional Loss - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141535694 chr3:141535695 nonsynonymous SNV 0.896 2 22 hPsi_associated_SNPs_6124 0 0 0 0 0 exosome 0.439957225426302 0.438725516017825 0.372961 0 hPsi_site_11541 iPseU_CNN:0.372961;iRNA_PseU:0 11542 chr5 140081625 140081625 1 + A G THYM 140081624 + 140081604 140081644 41 GCCTGTCAAGCGAGAGCTTTTACGGCATAGGGACTACAAGG GCCTGTCAAGCGAGAGCTTTTGCGGCATAGGGACTACAAGG < 41bp 0.815845137009097 0.418930761463855 0.34477693 0.26721233 prediction 0.631690274018193 Functional Loss - ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140081624 chr5:140081625 synonymous SNV . 0 22 hPsi_associated_SNPs_6125 0 0 1 0 1 Ribosome 0.438734706461166 0.438713582215829 0 0 hPsi_site_11542 iPseU_CNN:0;iRNA_PseU:0 not specified not specified 11543 chr5 1244402 1244402 1 + T G READ 1244401 + 1244381 1244421 41 TGGGAACTACTGGCTGGAGATTTTCGACAATTTTGCCGCTT TGGGAACTACTGGCTGGAGATGTTCGACAATTTTGCCGCTT < 41bp 0.820786700734317 0.504983980280509 0.9047588 0.7612652 prediction 0.631605440907616 Functional Loss - SLC6A18 ENSG00000164363 CDS Human protein_coding chr5:1244401 chr5:1244402 nonsynonymous SNV 0.508 1 22 hPsi_associated_SNPs_6126 0 0 0 0 2 unknown 0.439152335547809 0.43689937029075 0.2869872 0 hPsi_site_11543 iPseU_CNN:0.2869872;iRNA_PseU:0 11544 chr7 143657547 143657547 1 + A G rs116583353 143657546 + 143657526 143657566 41 AGCTCTCCTGTGCAGACTGCTATCACCTTTCAGCTGCCCAT AGCTCTCCTGTGCAGACTGCTGTCACCTTTCAGCTGCCCAT < 41bp 0.815796756012673 0.411887624256872 0.62564033 0.38954157 prediction 0.631593512025346 Functional Loss - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657546 chr7:143657547 nonsynonymous SNV 0.402 0 22 hPsi_associated_SNPs_6127 0 0 0 0 0 unknown 0.438718630037299 0.43871703195252 0.25128066 0 hPsi_site_11544 iPseU_CNN:0.25128066;iRNA_PseU:0 not specified not specified 11545 chr3 186395525 186395525 1 + T G COAD 186395524 + 186395504 186395544 41 GCCACTTCCTGAGGCCAATTTTCCCAGCTTCCCATTGCCGC GCCACTTCCTGAGGCCAATTTGCCCAGCTTCCCATTGCCGC < 41bp 0.815793027221325 0.491088232562955 0.33642882 0.3044107 prediction 0.63158605444265 Functional Loss - HRG ENSG00000113905 CDS Human protein_coding chr3:186395524 chr3:186395525 nonsynonymous SNV 0.932 1 22 hPsi_associated_SNPs_6128 0 0 0 0 0 exosome 0.438718592956901 0.438718593090945 0 0 hPsi_site_11545 iPseU_CNN:0;iRNA_PseU:0 11546 chr14 57747082 57747082 1 + A G HNSC 57747081 + 57747061 57747101 41 ACTCTGCATTTAGTGGGCCTTACAAATTTCCATTCACTCCA ACTCTGCATTTAGTGGGCCTTGCAAATTTCCATTCACTCCA < 41bp 0.899655529955076 0.583871622276809 0.34116226 0.27865404 prediction 0.631567815356535 Functional Loss - AP5M1 ENSG00000053770 CDS Human protein_coding chr14:57747081 chr14:57747082 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6129 0 0 1 0 1 Cytosol 0.438722127926576 0.438603008586777 0 0 hPsi_site_11546 iPseU_CNN:0;iRNA_PseU:0 11547 chr3 57542566 57542566 1 + A G UCEC 57542565 + 57542545 57542585 41 GTGCTGCAGATCGGCGATGTTAAGTACAAGGTGGAGCGCAA GTGCTGCAGATCGGCGATGTTGAGTACAAGGTGGAGCGCAA < 41bp 0.897434030030646 0.581653495301037 0.71472716 0.47799575 prediction 0.631561069459218 Functional Loss - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542565 chr3:57542566 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6130 0 0 1 0 0 Endoplasmic reticulum 0.438531269454119 0.437610784798161 0.42945432 0 hPsi_site_11547 iPseU_CNN:0.42945432;iRNA_PseU:0 11548 chr9 32634538 32634538 1 + A G UCEC 32634537 + 32634517 32634557 41 TTGGTATCTGTCACTTTATCTACATCTCCAGTTGATTGGGA TTGGTATCTGTCACTTTATCTGCATCTCCAGTTGATTGGGA < 41bp 0.891229392178594 0.575511075773437 0.3528425 0.24433523 prediction 0.631436632810315 Functional Loss - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634537 chr9:32634538 nonsynonymous SNV 0.819 0 22 hPsi_associated_SNPs_6131 0 0 0 0 0 exosome 0.438718593010387 0.438718592968921 0 0 hPsi_site_11548 iPseU_CNN:0;iRNA_PseU:0 11549 chr14 20443692 20443692 1 + A C HNSC 20443691 + 20443671 20443711 41 CAAACCCATGCTCACTTCATTAACTGATCTCTGTTTCTCTC CAAACCCATGCTCACTTCATTCACTGATCTCTGTTTCTCTC < 41bp 0.829838752339878 0.514132673574874 0.20859244 0.19447681 prediction 0.631412157530009 Functional Loss - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20443691 chr14:20443692 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_6132 0 0 0 0 0 unknown 0.438720782007029 0.440061829292839 0 0 hPsi_site_11549 iPseU_CNN:0;iRNA_PseU:0 11550 chr17 48453092 48453092 1 + A G CESC 48453091 + 48453071 48453111 41 CAGCTTCCAGCCTACCTGTCTACCTGCCCTGGCCAGAGCAG CAGCTTCCAGCCTACCTGTCTGCCTGCCCTGGCCAGAGCAG < 41bp 0.815693421840226 0.400694088202457 0.36768967 0.22612539 prediction 0.631386843680452 Functional Loss - EME1 ENSG00000108829;ENSG00000154920 CDS Human other chr17:48453091 chr17:48453092 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_6133 0 0 0 0 0 membrane 0.438718592304305 0.438718592982556 0 0 hPsi_site_11550 iPseU_CNN:0;iRNA_PseU:0 11551 chr16 69143481 69143481 1 + T G rs2232227 69143480 + 69143460 69143500 41 GCACCTGCTCATTCAGAGCCTTTTTGCCTTCCTGGAGCACC GCACCTGCTCATTCAGAGCCTGTTTGCCTTCCTGGAGCACC < 41bp 0.815687980207399 0.482230534692293 0.4225209 0.58218265 prediction 0.631375960414798 Functional Loss - HAS3 ENSG00000103044 CDS Human protein_coding chr16:69143480 chr16:69143481 synonymous SNV . 0 22 hPsi_associated_SNPs_6134 0 0 0 0 0 nucleus 0.438718593256956 0.438718541820719 0 0 hPsi_site_11551 iPseU_CNN:0;iRNA_PseU:0 11552 chr10 102824597 102824597 1 + A G LIHC 102824596 + 102824576 102824616 41 TTTGCAGACCAGCTGAACTCTACAGGCATCCCCCAGCTGCG TTTGCAGACCAGCTGAACTCTGCAGGCATCCCCCAGCTGCG < 41bp 0.815685384201401 0.394523734455841 0.55969524 0.23188308 prediction 0.631370768402803 Functional Loss - KAZALD1 ENSG00000107821 CDS Human protein_coding chr10:102824596 chr10:102824597 nonsynonymous SNV 0.062 2 22 hPsi_associated_SNPs_6135 0 0 0 0 1 nucleus 0.438736685903752 0.43872372006558 0.11939048 0 hPsi_site_11552 iPseU_CNN:0.11939048;iRNA_PseU:0 11553 chrX 69646780 69646780 1 + A C rs200891603 69646779 + 69646759 69646799 41 GGTCATCTACTTGGCCCCCCTATGCATCTCCTCACCCTGCA GGTCATCTACTTGGCCCCCCTCTGCATCTCCTCACCCTGCA < 41bp 0.887008225359162 0.571360834050492 0.4053445 0.37385798 prediction 0.631294782617341 Functional Loss - GDPD2 ENSG00000130055 CDS Human protein_coding chrX:69646779 chrX:69646780 synonymous SNV . 0 22 hPsi_associated_SNPs_6136 0 0 0 0 2 exosome 0.43871859280216 0.438718592995102 0 0 hPsi_site_11553 iPseU_CNN:0;iRNA_PseU:0 11554 chr11 55890069 55890069 1 + A C STAD 55890068 + 55890048 55890088 41 TGTCATTTATTGACCTCAGTTACTCAACTGTCGTCACACCT TGTCATTTATTGACCTCAGTTCCTCAACTGTCGTCACACCT < 41bp 0.844726331936446 0.52908170558599 0.5892624 0.24822402 prediction 0.631289252700912 Functional Loss - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55890068 chr11:55890069 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6137 0 0 0 0 0 unknown 0.452228440730608 0.43847043496682 0.1785248 0 hPsi_site_11554 iPseU_CNN:0.1785248;iRNA_PseU:0 11555 chr2 88828778 88828778 1 + A G UCEC 88828777 + 88828757 88828797 41 CCAGCACCTGCCATTTCACATATCCAGCTTCCCACGATCTG CCAGCACCTGCCATTTCACATGTCCAGCTTCCCACGATCTG < 41bp 0.903446420831616 0.587803760655039 0.8175092 0.5360172 prediction 0.631285320353154 Functional Loss - TEX37 ENSG00000172073 CDS Human protein_coding chr2:88828777 chr2:88828778 nonsynonymous SNV 0.012 2 22 hPsi_associated_SNPs_6138 0 0 0 0 0 unknown 0.43871893322365 0.438718770148103 0.562984 0 hPsi_site_11555 iPseU_CNN:0.562984;iRNA_PseU:0 11556 chr1 231125878 231125878 1 + T G READ 231125877 + 231125857 231125897 41 TCCATGGAAAACTCTGCATATTTTGTTTGCTTTGTGAAGCA TCCATGGAAAACTCTGCATATGTTGTTTGCTTTGTGAAGCA < 41bp 0.815574474052288 0.485449623687398 0.5840619 0.47230777 prediction 0.631148948104576 Functional Loss - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231125877 chr1:231125878 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6139 0 0 1 0 1 Endoplasmic reticulum 0.433620801040299 0.439969630951418 0.1681238 0 hPsi_site_11556 iPseU_CNN:0.1681238;iRNA_PseU:0 11557 chr19 53057701 53057701 1 + A G UCEC 53057700 + 53057680 53057720 41 TTCATAGTGGTGAAAAACCTTACAAGTGTAATCAGTGTGGC TTCATAGTGGTGAAAAACCTTGCAAGTGTAATCAGTGTGGC < 41bp 0.815567854593295 0.417578752041897 0.35434413 0.29505292 prediction 0.631135709186589 Functional Loss - ZNF808 ENSG00000198482 CDS Human protein_coding chr19:53057700 chr19:53057701 nonsynonymous SNV 0.219 3 22 hPsi_associated_SNPs_6140 0 0 1 0 0 chromatin 0.438365593319189 0.43908294434776 0 0 hPsi_site_11557 iPseU_CNN:0;iRNA_PseU:0 11558 chr2 170377417 170377417 1 + T G UCEC 170377416 + 170377396 170377436 41 CAAGAAAGAAGCTCCATCAGTTTGGTCAGCCTGGCTGGATC CAAGAAAGAAGCTCCATCAGTGTGGTCAGCCTGGCTGGATC < 41bp 0.815563898092287 0.486105432845609 0.36227527 0.31661764 prediction 0.631127796184575 Functional Loss - KLHL41 ENSG00000163093;ENSG00000239474;ENSG00000251569 CDS Human other chr2:170377416 chr2:170377417 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_6141 0 0 1 0 1 nucleoplasm 0.438718592803694 0.438718602410232 0 0 hPsi_site_11558 iPseU_CNN:0;iRNA_PseU:0 11559 chr20 43118020 43118020 1 + A G BLCA 43118019 + 43117999 43118039 41 CACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACG CACTGCCACCTGGAACGCGGTGCTGCTGGCTTCAGAAGACG < 41bp 0.815541394516571 0.399376605970694 0.88780236 0.2430448 prediction 0.631082789033142 Functional Loss - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43118019 chr20:43118020 synonymous SNV . 0 22 hPsi_associated_SNPs_6142 0 0 1 0 0 Ribosome 0.438719864209111 0.438718731980841 0.77560472 0 hPsi_site_11559 iPseU_CNN:0.77560472;iRNA_PseU:0 11560 chr5 163451 163451 1 + A G GBM 163450 + 163430 163470 41 GAAAACGCAAAGTTTCGAGATACCTCAGCCCGACAGTGGCC GAAAACGCAAAGTTTCGAGATGCCTCAGCCCGACAGTGGCC < 41bp 0.815535689764015 0.389346948329992 0.84410316 0.27148524 prediction 0.631071379528029 Functional Loss - PLEKHG4B ENSG00000153404 CDS Human protein_coding chr5:163450 chr5:163451 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_6143 0 0 0 0 0 exosome 0.43872264159279 0.438818562581103 0.68820632 0 hPsi_site_11560 iPseU_CNN:0.68820632;iRNA_PseU:0 11561 chr1 212798728 212798728 1 + T G UCEC 212798729 - 212798709 212798749 41 GGTGGCCGCAAGAGGTAAATTAGTTTTTCCCAATAGGCAAA GGTGGCCGCAAGAGGTAAATTCGTTTTTCCCAATAGGCAAA < 41bp 0.815531208012675 0.47262506458541 0.4241978 0.21525663 prediction 0.631062416025351 Functional Loss - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798729 chr1:212798728 nonsynonymous SNV 0.103 4 22 hPsi_associated_SNPs_6144 0 0 0 0 0 exosome 0.438717873301537 0.43874361412803 0 0 hPsi_site_11561 iPseU_CNN:0;iRNA_PseU:0 11562 chr9 140109365 140109365 1 + A G rs140542110 140109364 + 140109344 140109384 41 CTTCGAACTCCTGGCCTGTCTATCCCTCCATGAGCTGGAGC CTTCGAACTCCTGGCCTGTCTGTCCCTCCATGAGCTGGAGC < 41bp 0.815507415522036 0.391811002801111 0.2919135 0.23447889 prediction 0.631014831044073 Functional Loss - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140109364 chr9:140109365 synonymous SNV . 0 22 hPsi_associated_SNPs_6145 0 0 1 0 0 chromatin 0.438749827243156 0.438816196436359 0 0 hPsi_site_11562 iPseU_CNN:0;iRNA_PseU:0 11563 chr13 78320904 78320904 1 + A G UCEC 78320903 + 78320883 78320923 41 GGAGGAGCCCCAGTTCCCAGTATTTTCCTTCAAATAATTAC GGAGGAGCCCCAGTTCCCAGTGTTTTCCTTCAAATAATTAC < 41bp 0.90899249702432 0.593493779472705 0.5262067 0.24025944 prediction 0.63099743510323 Functional Loss - SLAIN1 ENSG00000139737 CDS Human protein_coding chr13:78320903 chr13:78320904 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_6146 0 0 1 0 1 exosome 0.438718592724116 0.438718592971534 0.0524134000000001 0 hPsi_site_11563 iPseU_CNN:0.0524134000000001;iRNA_PseU:0 11564 chr16 56974154 56974154 1 + A G KIRP 56974153 + 56974133 56974173 41 TGGGGGCCACCGTTGTTATGTACCTGTAAGCAGATGGTTTC TGGGGGCCACCGTTGTTATGTGCCTGTAAGCAGATGGTTTC < 41bp 0.815476525646813 0.407497580495058 0.5224965 0.19839609 prediction 0.630953051293626 Functional Loss - HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56974153 chr16:56974154 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_6147 0 0 1 0 1 Ribosome 0.438720395377372 0.438718903121461 0.0449930000000001 0 hPsi_site_11564 iPseU_CNN:0.0449930000000001;iRNA_PseU:0 11565 chr17 7755520 7755520 1 + A G KIRP 7755519 + 7755499 7755539 41 GGCCAATCCTGGATGATCTCTATGCATCCAATATTCCTGTG GGCCAATCCTGGATGATCTCTGTGCATCCAATATTCCTGTG < 41bp 0.815446327328764 0.388406886751224 0.3755984 0.32757288 prediction 0.630892654657528 Functional Loss - KDM6B ENSG00000132510 CDS Human protein_coding chr17:7755519 chr17:7755520 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6148 0 0 0 0 1 Cytosol 0.438717279082051 0.438713050035439 0 0 hPsi_site_11565 iPseU_CNN:0;iRNA_PseU:0 11566 chr3 125701210 125701210 1 + A G rs145066817 125701209 + 125701189 125701229 41 TCAGCACCTTCCAGTTTCTCTACACGTATATTGCCGAAGTG TCAGCACCTTCCAGTTTCTCTGCACGTATATTGCCGAAGTG < 41bp 0.815438002409255 0.418505210275321 0.30446172 0.18860197 prediction 0.630876004818509 Functional Loss - ROPN1B ENSG00000114547 CDS Human protein_coding chr3:125701209 chr3:125701210 nonsynonymous SNV 0.756 3 22 hPsi_associated_SNPs_6149 0 0 0 0 1 exosome 0.43863798262268 0.438250869611706 0 0 hPsi_site_11566 iPseU_CNN:0;iRNA_PseU:0 11567 chr12 64199170 64199170 1 + T G UCEC 64199169 + 64199149 64199189 41 GAACGATAAGCTTTGTTGGGTTTCAGCAAGAGAACAGTAAG GAACGATAAGCTTTGTTGGGTGTCAGCAAGAGAACAGTAAG < 41bp 0.8154316591991 0.496228225433853 0.40795383 0.25469506 prediction 0.630863318398201 Functional Loss - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64199169 chr12:64199170 synonymous SNV . 0 22 hPsi_associated_SNPs_6150 0 0 0 0 1 Endoplasmic reticulum 0.438715456636971 0.43861980395738 0 0 hPsi_site_11567 iPseU_CNN:0;iRNA_PseU:0 11568 chr3 25833026 25833026 1 + A G OV 25833025 + 25833005 25833045 41 TGAATTTTCAGACAAAAGGTTACAATAAAGTTAGCCCATTT TGAATTTTCAGACAAAAGGTTGCAATAAAGTTAGCCCATTT < 41bp 0.901856606555905 0.586429078263521 0.82391024 0.34785825 prediction 0.630855056584768 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833025 chr3:25833026 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_6151 0 0 1 0 0 Ribosome 0.438969172630578 0.438752962165242 0.64782048 0 hPsi_site_11568 iPseU_CNN:0.64782048;iRNA_PseU:0 11569 chr4 74703925 74703925 1 + A G rs148526735 74703924 + 74703904 74703944 41 ATACCGTTATCTGTGCAGAATATATTTCCTTATTCAGAATT ATACCGTTATCTGTGCAGAATGTATTTCCTTATTCAGAATT < 41bp 0.815416679195539 0.465334329228987 0.2833062 0.23350692 prediction 0.630833358391077 Functional Loss - CXCL6 ENSG00000124875 UTR3 Human protein_coding chr4:74703924 chr4:74703925 . . 0 22 hPsi_associated_SNPs_6152 0 0 0 0 0 exosome 0.438717098236249 0.438718233669428 0 0 hPsi_site_11569 iPseU_CNN:0;iRNA_PseU:0 11570 chr8 18080131 18080131 1 + T G STAD 18080130 + 18080110 18080150 41 AATACCGAAAAATCTACTCCTTTACTCTTAAGCCTCGAACA AATACCGAAAAATCTACTCCTGTACTCTTAAGCCTCGAACA < 41bp 0.815413294700777 0.495794335350048 0.29913998 0.2075358 prediction 0.630826589401555 Functional Loss - NAT1 ENSG00000171428 CDS Human protein_coding chr8:18080130 chr8:18080131 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6153 0 0 1 0 0 Cytosol 0.43871977796088 0.43871850757426 0 0 hPsi_site_11570 iPseU_CNN:0;iRNA_PseU:0 11571 chr17 76411024 76411024 1 + T G GBM 76411023 + 76411003 76411043 41 GCTGATTGGCTCTCCTAATTTTGGGTACAGGTCAGTTCACC GCTGATTGGCTCTCCTAATTTGGGGTACAGGTCAGTTCACC < 41bp 0.852793752849117 0.537404714408092 0.5631072 0.31890267 prediction 0.630778076882051 Functional Loss - PGS1 ENSG00000087157 CDS Human protein_coding chr17:76411023 chr17:76411024 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6154 0 0 1 1 2 chromatin 0.438718592967295 0.438718592995102 0.1262144 0 hPsi_site_11571 iPseU_CNN:0.1262144;iRNA_PseU:0 11572 chr2 102503626 102503626 1 + A G LGG 102503625 + 102503605 102503645 41 GCCAGAGGTTGAAAGTGATCTATGGATCCTGTGCTGGATTC GCCAGAGGTTGAAAGTGATCTGTGGATCCTGTGCTGGATTC < 41bp 0.815378499063932 0.41997527725392 0.5561882 0.3470673 prediction 0.630756998127864 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102503625 chr2:102503626 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6155 0 0 1 0 3 Ribosome 0.43871933129734 0.438718459062703 0.1123764 0 hPsi_site_11572 iPseU_CNN:0.1123764;iRNA_PseU:0 11573 chr11 118245770 118245770 1 + T G UCEC 118245769 + 118245749 118245789 41 AATCAGATGCCAGAAATCTTTTTCCAAATGTATGCCTCAGA AATCAGATGCCAGAAATCTTTGTCCAAATGTATGCCTCAGA < 41bp 0.815361680312776 0.475884944758436 0.3610351 0.32246563 prediction 0.630723360625552 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118245769 chr11:118245770 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6156 0 0 1 0 0 Nucleus 0.438718764538329 0.438720843042578 0 0 hPsi_site_11573 iPseU_CNN:0;iRNA_PseU:0 11574 chr7 123508597 123508597 1 + T G UCEC 123508596 + 123508576 123508616 41 GGGGCAAAATGTCACTATATTTTATGTCAACAGATTGGGAT GGGGCAAAATGTCACTATATTGTATGTCAACAGATTGGGAT < 41bp 0.820026208491581 0.504673077151708 0.2759986 0.23982361 prediction 0.630706262679745 Functional Loss - HYAL4 ENSG00000106302 CDS Human protein_coding chr7:123508596 chr7:123508597 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6157 0 0 0 0 0 Nucleus 0.438736807745654 0.438736479520349 0 0 hPsi_site_11574 iPseU_CNN:0;iRNA_PseU:0 11575 chr11 1972140 1972140 1 + A G STAD 1972139 + 1972119 1972159 41 TTCTGTACAGGTACCCCCTGTACCGGCTGGGTGGCCCACAA TTCTGTACAGGTACCCCCTGTGCCGGCTGGGTGGCCCACAA < 41bp 0.903246125971758 0.587903855573282 0.35938355 0.22231194 prediction 0.63068454079695 Functional Loss - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1972139 chr11:1972140 nonsynonymous SNV 0.959 3 22 hPsi_associated_SNPs_6158 0 0 1 0 1 Ribosome 0.4387092778229 0.438718370978511 0 0 hPsi_site_11575 iPseU_CNN:0;iRNA_PseU:0 11576 chr11 8014441 8014441 1 + A C SKCM 8014440 + 8014420 8014460 41 GTTCCATTTCACAGGTACGCTACGGGCCATGACATCACAGA GTTCCATTTCACAGGTACGCTCCGGGCCATGACATCACAGA < 41bp 0.815331592722332 0.436758321360053 0.7856434 0.31730244 prediction 0.630663185444664 Functional Loss - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8014440 chr11:8014441 nonsynonymous SNV 0.905 4 22 hPsi_associated_SNPs_6159 0 0 1 0 1 Nucleus 0.472953450492519 0.432360309491303 0.5712868 0 hPsi_site_11576 iPseU_CNN:0.5712868;iRNA_PseU:0 11577 chr10 93744020 93744020 1 + A G UCEC 93744019 + 93743999 93744039 41 TGATATCCTTTCAGAACATTTATATTATGACGAAATTGCCG TGATATCCTTTCAGAACATTTGTATTATGACGAAATTGCCG < 41bp 0.815323439479962 0.407722700356931 0.27888536 0.3087842 prediction 0.630646878959924 Functional Loss - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93744019 chr10:93744020 synonymous SNV . 0 22 hPsi_associated_SNPs_6160 0 0 1 0 1 Nucleus 0.438717467476119 0.438259902333589 0 0 hPsi_site_11577 iPseU_CNN:0;iRNA_PseU:0 11578 chr5 56177046 56177046 1 + T G COAD 56177045 + 56177025 56177065 41 GTTGGAATTTCCTGCTGAATTTTATCCTCATATTGTCAGTA GTTGGAATTTCCTGCTGAATTGTATCCTCATATTGTCAGTA < 41bp 0.815310773423333 0.486798617000919 0.33921432 0.26046872 prediction 0.630621546846665 Functional Loss - MAP3K1 ENSG00000095015 CDS Human protein_coding chr5:56177045 chr5:56177046 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6161 0 0 1 0 1 Cytosol 0.438717040389922 0.43873429043871 0 0 hPsi_site_11578 iPseU_CNN:0;iRNA_PseU:0 11579 chr1 240071629 240071629 1 + A G HNSC 240071628 + 240071608 240071648 41 GTTCTCGAAGCTGCAGCAGTTACGAACTTCAACAGCAAAGC GTTCTCGAAGCTGCAGCAGTTGCGAACTTCAACAGCAAAGC < 41bp 0.903566157080514 0.588257831181752 0.70285654 0.32763296 prediction 0.630616651797525 Functional Loss - CHRM3 ENSG00000133019 CDS Human protein_coding chr1:240071628 chr1:240071629 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_6162 0 0 0 0 0 exosome 0.436543645161269 0.437755482832452 0.40571308 0 hPsi_site_11579 iPseU_CNN:0.40571308;iRNA_PseU:0 11580 chr5 145616964 145616964 1 + A G OV 145616963 + 145616943 145616983 41 AACAAGACTACCTCCTCCTTTACCCCAGAACCTCCTTTACA AACAAGACTACCTCCTCCTTTGCCCCAGAACCTCCTTTACA < 41bp 0.815291621477863 0.42507602424886 0.64954627 0.30644506 prediction 0.630583242955725 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145616963 chr5:145616964 synonymous SNV . 0 22 hPsi_associated_SNPs_6163 0 0 1 0 1 Nucleus 0.438718592998615 0.43871859297896 0.29909254 0 hPsi_site_11580 iPseU_CNN:0.29909254;iRNA_PseU:0 11581 chr14 20585837 20585837 1 + A G LUSC 20585836 + 20585816 20585856 41 CTAACCTGAATACTCCCATGTATTTTCTCCTTGGTAATCTC CTAACCTGAATACTCCCATGTGTTTTCTCCTTGGTAATCTC < 41bp 0.887923038008575 0.572639605972843 0.63057613 0.35350412 prediction 0.630566864071465 Functional Loss - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20585836 chr14:20585837 nonsynonymous SNV 0.928 3 22 hPsi_associated_SNPs_6164 0 0 0 0 0 unknown 0.438718660044002 0.438720541329048 0.26115226 0 hPsi_site_11581 iPseU_CNN:0.26115226;iRNA_PseU:0 11582 chrX 30254210 30254210 1 + A C LUAD 30254209 + 30254189 30254229 41 ATCCAGAAAAAGTCTGCTGGTAGGTCACGTAGTGCTCTCAA ATCCAGAAAAAGTCTGCTGGTCGGTCACGTAGTGCTCTCAA < 41bp 0.815273370847802 0.461903627564178 0.5388141 0.19734448 prediction 0.630546741695604 Functional Loss - MAGEB3 ENSG00000198798 CDS Human protein_coding chrX:30254209 chrX:30254210 synonymous SNV . 0 22 hPsi_associated_SNPs_6165 0 0 0 0 0 unknown 0.438714495596534 0.438718368566255 0.0776281999999999 0 hPsi_site_11582 iPseU_CNN:0.0776281999999999;iRNA_PseU:0 11583 chr1 110116577 110116577 1 + A G STAD 110116576 + 110116556 110116596 41 AACAATATAAAGTAGTTGTCTACAGCAATACTATACAGTCC AACAATATAAAGTAGTTGTCTGCAGCAATACTATACAGTCC < 41bp 0.815269804724381 0.413578189821745 0.32806322 0.36571205 prediction 0.630539609448762 Functional Loss - GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110116576 chr1:110116577 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6166 0 0 1 0 2 Cytosol 0.438753648090368 0.438727974148644 0 0 hPsi_site_11583 iPseU_CNN:0;iRNA_PseU:0 11584 chr9 141071002 141071002 1 + A G PAAD 141071001 + 141070981 141071021 41 CTGCATAGATAACGAAGCGCTATATGACATATGTTCCAAGA CTGCATAGATAACGAAGCGCTGTATGACATATGTTCCAAGA < 41bp 0.815261123178262 0.451185475033189 0.7493928 0.6864743 prediction 0.630522246356524 Functional Loss - TUBBP5 ENSG00000159247 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:141071001 chr9:141071002 . . 0 22 hPsi_associated_SNPs_6167 0 0 0 0 0 unknown 0.438621725531752 0.438638499771276 0.125837 0 hPsi_site_11584 iPseU_CNN:0.125837;iRNA_PseU:0 11585 chr17 56232721 56232721 1 + A C rs554630598 56232720 + 56232700 56232740 41 GCTCCGAAATCTAGCTCTCATAGACCTCTGCTATTCCACAG GCTCCGAAATCTAGCTCTCATCGACCTCTGCTATTCCACAG < 41bp 0.815259807055294 0.464123872565777 0.33207485 0.23344004 prediction 0.630519614110588 Functional Loss - OR4D1 ENSG00000141194 CDS Human protein_coding chr17:56232720 chr17:56232721 synonymous SNV . 0 22 hPsi_associated_SNPs_6168 0 0 0 0 0 unknown 0.437667402362522 0.438715160367958 0 0 hPsi_site_11585 iPseU_CNN:0;iRNA_PseU:0 11586 chr12 3048556 3048556 1 + A G UCEC 3048555 + 3048535 3048575 41 CAACTACCCACTTTGTGCAGTACAGGCCTTTGGCATCGGTC CAACTACCCACTTTGTGCAGTGCAGGCCTTTGGCATCGGTC < 41bp 0.900450515596071 0.58521627819139 0.5666662 0.30298108 prediction 0.630468474809363 Functional Loss - TULP3 ENSG00000078246 CDS Human protein_coding chr12:3048555 chr12:3048556 synonymous SNV . 0 22 hPsi_associated_SNPs_6169 0 0 0 1 2 Cytosol 0.438716055927012 0.438721974120785 0.1333324 0 hPsi_site_11586 iPseU_CNN:0.1333324;iRNA_PseU:0 11587 chr16 67262721 67262721 1 + A G SKCM 67262720 + 67262700 67262740 41 GCACCTTAAGGATGTGATCCTACTGACAGCCATCGTGCAGG GCACCTTAAGGATGTGATCCTGCTGACAGCCATCGTGCAGG < 41bp 0.90085882043475 0.58563668230235 0.33198857 0.20437005 prediction 0.6304442762648 Functional Loss - TMEM208 ENSG00000168701 CDS Human protein_coding chr16:67262720 chr16:67262721 synonymous SNV . 0 22 hPsi_associated_SNPs_6170 0 0 1 0 2 Ribosome 0.438790723642052 0.438732127332412 0 0 hPsi_site_11587 iPseU_CNN:0;iRNA_PseU:0 11588 chr12 48866585 48866585 1 + A C rs7956679 48866584 + 48866564 48866604 41 TGAATTTGAAGAACTGGAATTATTAAATACAATCAACATAG TGAATTTGAAGAACTGGAATTCTTAAATACAATCAACATAG < 41bp 0.815221834898222 0.49187323139821 0.28636783 0.31979078 prediction 0.630443669796443 Functional Loss - ANP32D ENSG00000139223 CDS Human protein_coding chr12:48866584 chr12:48866585 nonsynonymous SNV 0.686 0 22 hPsi_associated_SNPs_6171 0 0 0 0 0 unknown 0.438101324057164 0.438740403793493 0 0 hPsi_site_11588 iPseU_CNN:0;iRNA_PseU:0 11589 chr12 55523871 55523871 1 + A G COAD 55523870 + 55523850 55523890 41 TCTGTTATTGAACCCAAGGCTATGATCAACTTCTGGTCTGA TCTGTTATTGAACCCAAGGCTGTGATCAACTTCTGGTCTGA < 41bp 0.815197431281799 0.430746424339751 0.29446 0.21319789 prediction 0.630394862563598 Functional Loss - OR9K2 ENSG00000170605 CDS Human protein_coding chr12:55523870 chr12:55523871 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_6172 0 0 0 0 0 unknown 0.438735367610526 0.438720207016959 0 0 hPsi_site_11589 iPseU_CNN:0;iRNA_PseU:0 11590 chrX 135741202 135741202 1 + A G COAD 135741201 + 135741181 135741221 41 CCCTTTCTTTGTAACAGTGTTACAGTGGGCTGAAAAAGGAT CCCTTTCTTTGTAACAGTGTTGCAGTGGGCTGAAAAAGGAT < 41bp 0.815192856599386 0.424909041506113 0.32160544 0.24207532 prediction 0.630385713198772 Functional Loss - CD40LG ENSG00000102245 CDS Human protein_coding chrX:135741201 chrX:135741202 synonymous SNV . 0 22 hPsi_associated_SNPs_6173 0 0 0 0 0 exosome 0.438677085812918 0.438777694868634 0 0 hPsi_site_11590 iPseU_CNN:0;iRNA_PseU:0 11591 chr14 50249133 50249133 1 + T G UCS 50249132 + 50249112 50249152 41 CGATGAAGGAGAAGTAATTGTTTTTGGTGGATGTGCCAACA CGATGAAGGAGAAGTAATTGTGTTTGGTGGATGTGCCAACA < 41bp 0.841790353098845 0.52662961761058 0.7904484 0.5267309 prediction 0.630321470976532 Functional Loss - KLHDC2 ENSG00000165516 CDS Human protein_coding chr14:50249132 chr14:50249133 synonymous SNV . 0 22 hPsi_associated_SNPs_6174 0 0 1 2 2 Cytosol 0.438710550863747 0.438718610294929 0.527435 0 hPsi_site_11591 iPseU_CNN:0.527435;iRNA_PseU:0 11592 chrX 134993921 134993921 1 + A G UCEC 134993920 + 134993900 134993940 41 TCAGCAAAGATGAGCTGCTTTACAAACCTGATAGTAATGAA TCAGCAAAGATGAGCTGCTTTGCAAACCTGATAGTAATGAA < 41bp 0.815160673888537 0.419330071166503 0.3778427 0.28573233 prediction 0.630321347777074 Functional Loss - SAGE1 ENSG00000181433 CDS Human protein_coding chrX:134993920 chrX:134993921 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_6175 0 0 0 0 0 Cytosol 0.43868174549478 0.438719320037442 0 0 hPsi_site_11592 iPseU_CNN:0;iRNA_PseU:0 11593 chr9 91083431 91083431 1 + A G COAD 91083430 + 91083410 91083450 41 CTGTCATGAACACATGGTTTTACATTACCTATGAGAAAGAC CTGTCATGAACACATGGTTTTGCATTACCTATGAGAAAGAC < 41bp 0.905629580289955 0.590480491351591 0.6575771 0.44848186 prediction 0.630298177876728 Functional Loss - SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083430 chr9:91083431 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6176 0 0 1 0 1 Cytosol 0.438793279260675 0.438858557920508 0.3151542 0 hPsi_site_11593 iPseU_CNN:0.3151542;iRNA_PseU:0 11594 chr10 70679675 70679675 1 + A G OV 70679674 + 70679654 70679694 41 AGTGGGTCTGAAGGGAGGGCTATTATTTTCTGTGAGACCAA AGTGGGTCTGAAGGGAGGGCTGTTATTTTCTGTGAGACCAA < 41bp 0.904654668252985 0.589521586140727 0.36731315 0.25521216 prediction 0.630266164224516 Functional Loss - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70679674 chr10:70679675 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6177 0 0 1 0 2 chromatin 0.438718594228295 0.438718592957057 0 0 hPsi_site_11594 iPseU_CNN:0;iRNA_PseU:0 11595 chr3 33171536 33171536 1 + A G UCEC 33171535 + 33171515 33171555 41 TTGTGGCTACCATGTATCATTACTTGCAGTTTGCCTATTAT TTGTGGCTACCATGTATCATTGCTTGCAGTTTGCCTATTAT < 41bp 0.81512795044486 0.411327966119551 0.35088617 0.26725054 prediction 0.63025590088972 Functional Loss - CRTAP ENSG00000170275 CDS Human protein_coding chr3:33171535 chr3:33171536 nonsynonymous SNV 0.950 4 22 hPsi_associated_SNPs_6178 0 0 1 0 0 Endoplasmic reticulum 0.438718264650082 0.438718563969797 0 0 hPsi_site_11595 iPseU_CNN:0;iRNA_PseU:0 11596 chr3 57545635 57545635 1 + A G COAD 57545634 + 57545614 57545654 41 GGTTGAACAGGTGATTCCATTACCTAGTCATGAAGAAGTTA GGTTGAACAGGTGATTCCATTGCCTAGTCATGAAGAAGTTA < 41bp 0.894298657161039 0.579209295745885 0.30458978 0.26647055 prediction 0.630178722830309 Functional Loss - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57545634 chr3:57545635 synonymous SNV . 0 22 hPsi_associated_SNPs_6179 0 0 1 1 0 Endoplasmic reticulum 0.438732615929927 0.438719405679127 0 0 hPsi_site_11596 iPseU_CNN:0;iRNA_PseU:0 11597 chr7 44046986 44046986 1 + A G CESC 44046985 + 44046965 44047005 41 GTAAGCGTCGGTTCCAGTTATACCGTTCCATGAACCCGAGG GTAAGCGTCGGTTCCAGTTATGCCGTTCCATGAACCCGAGG < 41bp 0.8150789789671 0.405101302052642 0.69835997 0.35656086 prediction 0.6301579579342 Functional Loss - SPDYE1 ENSG00000136206 CDS Human protein_coding chr7:44046985 chr7:44046986 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_6180 0 0 0 0 0 exosome 0.439444936128815 0.43875299192253 0.39671994 0 hPsi_site_11597 iPseU_CNN:0.39671994;iRNA_PseU:0 11598 chr2 201499549 201499549 1 + A G LUSC 201499548 + 201499528 201499568 41 GGAGGTCAAGAACATTTTTATATGGAAACCCAAAGCATGCT GGAGGTCAAGAACATTTTTATGTGGAAACCCAAAGCATGCT < 41bp 0.815074226514612 0.398049151239485 0.567654 0.3474375 prediction 0.630148453029225 Functional Loss - AOX1 ENSG00000138356 CDS Human protein_coding chr2:201499548 chr2:201499549 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6181 0 0 0 0 2 Endoplasmic reticulum 0.438718596920978 0.438720790117276 0.135308 0 hPsi_site_11598 iPseU_CNN:0.135308;iRNA_PseU:0 11599 chr6 52329810 52329810 1 + A G BLCA 52329809 + 52329789 52329829 41 TTGGGAGAACTTTCTTCATTTATGATTGTGATCCATTTACT TTGGGAGAACTTTCTTCATTTGTGATTGTGATCCATTTACT < 41bp 0.815063485979743 0.396429916304985 0.3384542 0.2595686 prediction 0.630126971959486 Functional Loss - EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52329809 chr6:52329810 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6182 0 0 0 0 0 Cytosol 0.438718587022318 0.438718595015492 0 0 hPsi_site_11599 iPseU_CNN:0;iRNA_PseU:0 11600 chrX 69370131 69370131 1 + A G LGG 69370130 + 69370110 69370150 41 GGTATGAGCAACATCGGAAATATGGAGCATTACCGGATCAG GGTATGAGCAACATCGGAAATGTGGAGCATTACCGGATCAG < 41bp 0.815042237278014 0.394396680946543 0.5175292 0.523751 prediction 0.630084474556027 Functional Loss - IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69370130 chrX:69370131 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_6183 0 0 1 0 1 Cytosol 0.438716349275605 0.438697360474309 0 0 hPsi_site_11600 iPseU_CNN:0;iRNA_PseU:0 11601 chrX 17771464 17771464 1 + A G LUAD 17771463 + 17771443 17771483 41 GCTGGGAACGGCTGTGAAGCTATGCTACTACATTGACCGAC GCTGGGAACGGCTGTGAAGCTGTGCTACTACATTGACCGAC < 41bp 0.896389743416236 0.581350646378603 0.431773 0.27380276 prediction 0.630078194075267 Functional Loss - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17771463 chrX:17771464 synonymous SNV . 0 22 hPsi_associated_SNPs_6184 0 0 1 0 1 insoluble cytoplasm 0.437916909265691 0.433786723750926 0 0 hPsi_site_11601 iPseU_CNN:0;iRNA_PseU:0 11602 chr10 122624719 122624719 1 + T G UCEC 122624718 + 122624698 122624738 41 GAACGCACAGGAGTTCCATTTTTACAGGTATCTACAATTCA GAACGCACAGGAGTTCCATTTGTACAGGTATCTACAATTCA < 41bp 0.815275560223664 0.500252418102009 0.2627684 0.21821928 prediction 0.630046284243311 Functional Loss - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122624718 chr10:122624719 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_6185 0 0 1 0 1 Nucleus 0.438217711055654 0.438455546133085 0 0 hPsi_site_11602 iPseU_CNN:0;iRNA_PseU:0 11603 chr15 44149345 44149345 1 + A G STAD 44149344 + 44149324 44149364 41 CCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGTA CCAGTGCATAGACAGTATTTTGTCACTGCCGGATTGAGGTA < 41bp 0.814983791844566 0.415048479280546 0.32999057 0.28477573 prediction 0.629967583689132 Functional Loss - WDR76 ENSG00000092470 CDS Human protein_coding chr15:44149344 chr15:44149345 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_6186 0 0 1 0 1 chromatin 0.438718602062548 0.438718384181951 0 0 hPsi_site_11603 iPseU_CNN:0;iRNA_PseU:0 11604 chr18 72178240 72178240 1 + T G BLCA 72178239 + 72178219 72178259 41 CTCAGGGGCATTTGCTACTTTTTCATCGAGGTACAGTGCCA CTCAGGGGCATTTGCTACTTTGTCATCGAGGTACAGTGCCA < 41bp 0.814964714351065 0.486496366155757 0.30537584 0.24323526 prediction 0.629929428702129 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72178239 chr18:72178240 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_6187 0 0 1 0 1 Ribosome 0.438717355365656 0.438740681486625 0 0 hPsi_site_11604 iPseU_CNN:0;iRNA_PseU:0 11605 chr11 107904565 107904565 1 + T G UCEC 107904564 + 107904544 107904584 41 AGTTTGAAGACAAATGGGATTTTATGCGCCCGATTGTTTTG AGTTTGAAGACAAATGGGATTGTATGCGCCCGATTGTTTTG < 41bp 0.828024109595859 0.51308056679967 0.6489032 0.33382338 prediction 0.629887085592379 Functional Loss - CUL5 ENSG00000166266 CDS Human protein_coding chr11:107904564 chr11:107904565 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_6188 0 0 1 0 2 Ribosome 0.438740598550107 0.438718592046268 0.2978064 0 hPsi_site_11605 iPseU_CNN:0.2978064;iRNA_PseU:0 11606 chr16 31142271 31142271 1 + A G rs17855606 31142270 + 31142250 31142290 41 GCGGTGGGGGAGTGTCAGTATATGGACTGGTAGGAGTCAAG GCGGTGGGGGAGTGTCAGTATGTGGACTGGTAGGAGTCAAG < 41bp 0.814908711295775 0.402889483065319 0.4009355 0.30062723 prediction 0.629817422591549 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31142270 chr16:31142271 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_6189 0 0 1 0 0 Ribosome 0.4386934367049 0.438707663346091 0 0 hPsi_site_11606 iPseU_CNN:0;iRNA_PseU:0 Heel bone mineral density 11607 chr13 49777377 49777377 1 + A G COAD 49777376 + 49777356 49777396 41 TGAAAGGTGATCCAGTTATTTACAGTCTTCAAGTTATGTTG TGAAAGGTGATCCAGTTATTTGCAGTCTTCAAGTTATGTTG < 41bp 0.814905177832859 0.417708678443588 0.53834724 0.23626736 prediction 0.629810355665719 Functional Loss - FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49777376 chr13:49777377 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6190 0 0 1 1 2 Cytosol 0.438718561811441 0.43871751992023 0.07669448 0 hPsi_site_11607 iPseU_CNN:0.07669448;iRNA_PseU:0 11608 chr14 103371735 103371735 1 + T G LUAD 103371734 + 103371714 103371754 41 ATGGGGAAGACCCTGTCCCTTTACAGCCAGCCTTTCTACAC ATGGGGAAGACCCTGTCCCTTGACAGCCAGCCTTTCTACAC < 41bp 0.835400328411275 0.52049902951581 0.5285722 0.2409732 prediction 0.629802597790931 Functional Loss - TRAF3 ENSG00000131323 CDS Human protein_coding chr14:103371734 chr14:103371735 nonsynonymous SNV 0.977 4 22 hPsi_associated_SNPs_6191 0 0 1 0 0 Cytosol 0.438718589207515 0.438716872623273 0.0571444000000001 0 hPsi_site_11608 iPseU_CNN:0.0571444000000001;iRNA_PseU:0 11609 chr1 248366979 248366979 1 + A G STAD 248366978 + 248366958 248366998 41 AAGATTCTTTTCATCTGCTGTATAGTAATGATTGTTTTCCC AAGATTCTTTTCATCTGCTGTGTAGTAATGATTGTTTTCCC < 41bp 0.814885015707895 0.435023988946704 0.255844 0.20385817 prediction 0.629770031415789 Functional Loss - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248366978 chr1:248366979 nonsynonymous SNV 0.031 0 22 hPsi_associated_SNPs_6192 0 0 0 0 0 exosome 0.43872584752147 0.437576235871098 0 0 hPsi_site_11609 iPseU_CNN:0;iRNA_PseU:0 11610 chr3 186792054 186792054 1 + A C rs145340448 186792053 + 186792033 186792073 41 GCCCCAGATGCCTTGGGAGCTATGGGACATTCTTCAAGAAA GCCCCAGATGCCTTGGGAGCTCTGGGACATTCTTCAAGAAA < 41bp 0.8831554892763 0.568272019123515 0.32504815 0.22591504 prediction 0.629766940305569 Functional Loss - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186792053 chr3:186792054 synonymous SNV . 0 22 hPsi_associated_SNPs_6193 0 0 1 0 1 Ribosome 0.438718343683676 0.438718965617358 0 0 hPsi_site_11610 iPseU_CNN:0;iRNA_PseU:0 11611 chr7 45717522 45717522 1 + A G STAD 45717521 + 45717501 45717541 41 AGAAACCGCTCATCTTTTTCTACCAACGTTGTCTACACCAC AGAAACCGCTCATCTTTTTCTGCCAACGTTGTCTACACCAC < 41bp 0.814871343230798 0.394197736291635 0.660273 0.3527596 prediction 0.629742686461596 Functional Loss - ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45717521 chr7:45717522 nonsynonymous SNV 0.530 0 22 hPsi_associated_SNPs_6194 0 0 0 0 1 Nucleus 0.438715101162326 0.438600611266296 0.320546 0 hPsi_site_11611 iPseU_CNN:0.320546;iRNA_PseU:0 11612 chr20 30753132 30753132 1 + A G STAD 30753131 + 30753111 30753151 41 AGTTCATCCCCTCTCTCCTCTACTTTGGCTACACGGCCCTC AGTTCATCCCCTCTCTCCTCTGCTTTGGCTACACGGCCCTC < 41bp 0.814870280551055 0.399735518648689 0.550303 0.2948289 prediction 0.62974056110211 Functional Loss - TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30753131 chr20:30753132 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6195 0 0 1 0 1 Nucleus 0.438374938159794 0.438591466835522 0.100606 0 hPsi_site_11612 iPseU_CNN:0.100606;iRNA_PseU:0 11613 chr17 7406550 7406550 1 + T G UCEC 7406549 + 7406529 7406569 41 AGAACGAGTTGGAGCGGGAATTTGAGCGGATGCGGGAGGAT AGAACGAGTTGGAGCGGGAATGTGAGCGGATGCGGGAGGAT < 41bp 0.851243109580251 0.536384468719185 0.7190316 0.4078017 prediction 0.629717281722132 Functional Loss - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7406549 chr17:7406550 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_6196 0 0 1 0 1 Nucleus 0.438718597515236 0.43871859299518 0.4380632 0 hPsi_site_11613 iPseU_CNN:0.4380632;iRNA_PseU:0 11614 chr17 26654455 26654455 1 + A G rs556567668 26654454 + 26654434 26654474 41 AGGACCAGACCAGAAACTGCTAAAGAACATGGCCTGTTTGA AGGACCAGACCAGAAACTGCTGAAGAACATGGCCTGTTTGA < 41bp 0.814838934341398 0.449584621187536 0.51525223 0.32438102 prediction 0.629677868682797 Functional Loss - TMEM97 ENSG00000109084 UTR3 Human protein_coding chr17:26654454 chr17:26654455 . . 0 22 hPsi_associated_SNPs_6197 0 0 1 0 0 Endoplasmic reticulum 0.438718889311655 0.438718543137619 0.03050446 0 hPsi_site_11614 iPseU_CNN:0.03050446;iRNA_PseU:0 11615 chr14 61518786 61518786 1 + T G UCEC 61518785 + 61518765 61518805 41 GTACATCAACATGTTTGATTTTTATATTCCCAGGACTATTT GTACATCAACATGTTTGATTTGTATATTCCCAGGACTATTT < 41bp 0.822725815625948 0.5078897978549 0.30730504 0.29439574 prediction 0.629672035542096 Functional Loss - SLC38A6 ENSG00000139974 CDS Human protein_coding chr14:61518785 chr14:61518786 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6198 0 0 1 0 2 Endoplasmic reticulum 0.439019607137239 0.438131972331728 0 0 hPsi_site_11615 iPseU_CNN:0;iRNA_PseU:0 11616 chr2 3628443 3628443 1 + A G UCS 3628442 + 3628422 3628462 41 AAGCTCACGGGCAAGGATGTTAATTTTGAATTCCCAGAGTT AAGCTCACGGGCAAGGATGTTGATTTTGAATTCCCAGAGTT < 41bp 0.894858528994855 0.580024066100465 0.31589293 0.29888678 prediction 0.62966892578878 Functional Loss - RPS7 ENSG00000171863 CDS Human protein_coding chr2:3628442 chr2:3628443 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6199 0 0 0 2 1 Nucleus 0.43871877408145 0.438718592933108 0 0 hPsi_site_11616 iPseU_CNN:0;iRNA_PseU:0 11617 chr16 23383173 23383173 1 + A G STAD 23383172 + 23383152 23383192 41 AGGTCCCCGTCCAAAACTTCTACAGTGACTACAACACGACC AGGTCCCCGTCCAAAACTTCTGCAGTGACTACAACACGACC < 41bp 0.814833381941966 0.388241039594099 0.3610396 0.32385248 prediction 0.629666763883933 Functional Loss - SCNN1B ENSG00000168447 CDS Human protein_coding chr16:23383172 chr16:23383173 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_6200 0 0 0 0 2 exosome 0.438718613690918 0.438718583616969 0 0 hPsi_site_11617 iPseU_CNN:0;iRNA_PseU:0 11618 chr5 161117268 161117268 1 + A G COAD 161117267 + 161117247 161117287 41 GAAGATGGGCTACTTCATGATACAGATATACACTCCTTGCA GAAGATGGGCTACTTCATGATGCAGATATACACTCCTTGCA < 41bp 0.908618739688826 0.593790634058086 0.6391961 0.28895158 prediction 0.62965621126148 Functional Loss - GABRA6 ENSG00000145863 CDS Human protein_coding chr5:161117267 chr5:161117268 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6201 0 0 0 0 2 unknown 0.438796575387135 0.43868191616761 0.2783922 0 hPsi_site_11618 iPseU_CNN:0.2783922;iRNA_PseU:0 11619 chr1 111894125 111894125 1 + A G rs138003481 111894124 + 111894104 111894144 41 TAAAGACTAGTGCACAGTGCTATCTCCATCTACTGACTTGT TAAAGACTAGTGCACAGTGCTGTCTCCATCTACTGACTTGT < 41bp 0.814827348683381 0.442527970213419 0.329725 0.25032485 prediction 0.629654697366763 Functional Loss - PIFO ENSG00000173947 UTR3 Human protein_coding chr1:111894124 chr1:111894125 . . 0 22 hPsi_associated_SNPs_6202 0 0 0 0 0 exosome 0.438686148239818 0.438363061958474 0 0 hPsi_site_11619 iPseU_CNN:0;iRNA_PseU:0 11620 chr7 44746917 44746917 1 + A G UCEC 44746916 + 44746896 44746936 41 TCTTCTGCACCGGCAAAGTGTATTATGACCTCACCCGGGAG TCTTCTGCACCGGCAAAGTGTGTTATGACCTCACCCGGGAG < 41bp 0.814826588999308 0.382591496518198 0.7574456 0.5713426 prediction 0.629653177998616 Functional Loss - OGDH ENSG00000105953 CDS Human protein_coding chr7:44746916 chr7:44746917 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6203 0 0 1 0 2 Nucleus 0.43871977876799 0.439033726123559 0.372206 0 hPsi_site_11620 iPseU_CNN:0.372206;iRNA_PseU:0 11621 chr13 45957312 45957312 1 + A C CHOL 45957311 + 45957291 45957331 41 ATAGTAACTCCCAAGTAAGGTACCTGCCGTCGGCAGATTGG ATAGTAACTCCCAAGTAAGGTCCCTGCCGTCGGCAGATTGG < 41bp 0.847341425974232 0.532520303440721 0.7529006 0.1827127 prediction 0.629642245067023 Functional Loss - TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45957311 chr13:45957312 . . 0 22 hPsi_associated_SNPs_6204 0 0 1 0 2 unknown 0.438718592995102 0.438718592995102 0.5058012 0 hPsi_site_11621 iPseU_CNN:0.5058012;iRNA_PseU:0 not specified not specified 11622 chr20 47895242 47895242 1 + A G rs6648 47895241 + 47895221 47895261 41 TGCAGTCAGGCTTCATACGCTATTGTCCTGCCCGTAAGTTC TGCAGTCAGGCTTCATACGCTGTTGTCCTGCCCGTAAGTTC < 41bp 0.870920277425264 0.556108091732518 0.8224561 0.33451685 prediction 0.629624371385493 Functional Loss - ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895241 chr20:47895242 . . 0 22 hPsi_associated_SNPs_6205 0 0 1 0 2 unknown 0.43877308374293 0.438754715954938 0.6449122 0 hPsi_site_11622 iPseU_CNN:0.6449122;iRNA_PseU:0 11623 chr20 49575569 49575569 1 + A G COAD 49575568 + 49575548 49575588 41 CGAGATGAGATTCTGCGCTATAGCCGGCAGCTAGTGCTGCC CGAGATGAGATTCTGCGCTATGGCCGGCAGCTAGTGCTGCC < 41bp 0.814792522333722 0.413578075800008 0.6784966 0.33218214 prediction 0.629585044667444 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575568 chr20:49575569 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_6206 0 0 0 0 0 Nucleus 0.438718592718821 0.438718593011007 0.3569932 0 hPsi_site_11623 iPseU_CNN:0.3569932;iRNA_PseU:0 11624 chr1 214170404 214170404 1 + A G STAD 214170403 + 214170383 214170423 41 GTTGAGAATATAATTCGGGGTATGAGCCATTCCCCCAGTGT GTTGAGAATATAATTCGGGGTGTGAGCCATTCCCCCAGTGT < 41bp 0.894080063925035 0.579291385082816 0.680595 0.29641488 prediction 0.629577357684439 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214170403 chr1:214170404 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6207 0 0 1 0 0 cytosol 0.438718579551243 0.438717833098266 0.36119 0 hPsi_site_11624 iPseU_CNN:0.36119;iRNA_PseU:0 11625 chrX 117959260 117959260 1 + T G GBM 117959259 + 117959239 117959279 41 GCCGGCGGCTGAATGCACCCTTGCCGCCTTGGGCCCATTCC GCCGGCGGCTGAATGCACCCTGGCCGCCTTGGGCCCATTCC < 41bp 0.828865079616118 0.514081012931379 0.2817528 0.16944748 prediction 0.629568133369479 Functional Loss - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117959259 chrX:117959260 nonsynonymous SNV 0.973 3 22 hPsi_associated_SNPs_6208 0 0 0 0 0 exosome 0.43871862772425 0.438718153906457 0 0 hPsi_site_11625 iPseU_CNN:0;iRNA_PseU:0 11626 chr22 40431678 40431678 1 + A C rs144317108 40431677 + 40431657 40431697 41 GCAGGCAAGGGCTGAAATCCTATCTCTGCCACCGAACAGCT GCAGGCAAGGGCTGAAATCCTCTCTCTGCCACCGAACAGCT < 41bp 0.814771259097348 0.460646684247086 0.34418145 0.2383191 prediction 0.629542518194696 Functional Loss - LOC100130899 ENSG00000133477 UTR3 Human protein_coding chr22:40431677 chr22:40431678 . . 0 22 hPsi_associated_SNPs_6209 0 0 0 0 0 unknown 0.438718379447204 0.438911524251442 0 0 hPsi_site_11626 iPseU_CNN:0;iRNA_PseU:0 11627 chr20 61591862 61591862 1 + A C ESCA 61591861 + 61591841 61591881 41 CTCCACTTGTTGCAGGGGTTTACTTCCCTGCCCTGACCAGC CTCCACTTGTTGCAGGGGTTTCCTTCCCTGCCCTGACCAGC < 41bp 0.87421511822422 0.559444099047017 0.8089266 0.32444638 prediction 0.629542038354406 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61591861 chr20:61591862 nonsynonymous SNV 0.177 2 22 hPsi_associated_SNPs_6210 0 0 1 0 2 Ribosome 0.438726601008748 0.438717974676722 0.6178532 0 hPsi_site_11627 iPseU_CNN:0.6178532;iRNA_PseU:0 11628 chr17 30526015 30526015 1 + T G UCEC 30526014 + 30525994 30526034 41 GAATTAAATCATCATGCATATTTATTTCTCCAAAGCACCTT GAATTAAATCATCATGCATATGTATTTCTCCAAAGCACCTT < 41bp 0.814760622420608 0.485276406538768 0.31515095 0.35358077 prediction 0.629521244841217 Functional Loss - RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30526014 chr17:30526015 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6211 0 0 1 3 2 Cytosol 0.438766479513039 0.438718559409885 0 0 hPsi_site_11628 iPseU_CNN:0;iRNA_PseU:0 11629 chr4 152212516 152212516 1 + A G rs540101466 152212515 + 152212495 152212535 41 TGTGCCTTTGGACCTAACACTATACACAGAGTAGGCACTGT TGTGCCTTTGGACCTAACACTGTACACAGAGTAGGCACTGT < 41bp 0.814759038004168 0.406828772825687 0.2780639 0.19170272 prediction 0.629518076008337 Functional Loss - PRSS48 ENSG00000189099 CDS Human protein_coding chr4:152212515 chr4:152212516 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_6212 0 0 0 0 0 nucleus 0.438726011936813 0.438741038822289 0 0 hPsi_site_11629 iPseU_CNN:0;iRNA_PseU:0 11630 chr1 114442719 114442719 1 + T C UCEC 114442720 - 114442700 114442740 41 ACGCCAGATCTTGCATAGTTTACCAGGTCACTTTAGCAGCC ACGCCAGATCTTGCATAGTTTGCCAGGTCACTTTAGCAGCC < 41bp 0.907826786959891 0.593107942581321 0.4706627 0.3406325 prediction 0.629437688757141 Functional Loss - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442720 chr1:114442719 synonymous SNV . 0 22 hPsi_associated_SNPs_6213 0 0 1 0 0 chromatin 0.438722757880592 0.438753895643596 0 0 hPsi_site_11630 iPseU_CNN:0;iRNA_PseU:0 11631 chrX 115584263 115584263 1 + T G UCEC 115584262 + 115584242 115584282 41 TTTGGTCCATATTATTTTTTTTCATGCTTTTAACTTTGGGT TTTGGTCCATATTATTTTTTTGCATGCTTTTAACTTTGGGT < 41bp 0.814700124859498 0.496778967792365 0.24836436 0.20899624 prediction 0.629400249718996 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115584262 chrX:115584263 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6214 0 0 0 0 2 cytosol 0.438718593003186 0.438718592995147 0 0 hPsi_site_11631 iPseU_CNN:0;iRNA_PseU:0 11632 chr20 33834651 33834651 1 + A G UCEC 33834650 + 33834630 33834670 41 CCGTGTCTTTCAGAACTGGTTAAAGTCCTATGGCTATCTGC CCGTGTCTTTCAGAACTGGTTGAAGTCCTATGGCTATCTGC < 41bp 0.903834705659167 0.589135553297664 0.8717439 0.7598747 prediction 0.629398304723007 Functional Loss - MMP24 ENSG00000125966 CDS Human protein_coding chr20:33834650 chr20:33834651 synonymous SNV . 0 22 hPsi_associated_SNPs_6215 0 0 0 0 1 Ribosome 0.438719751939751 0.438666634305566 0.2237384 0 hPsi_site_11632 iPseU_CNN:0.2237384;iRNA_PseU:0 11633 chr22 40343136 40343136 1 + T G UCEC 40343135 + 40343115 40343155 41 AAGCTGTTGCCAAGTTTGATTTCACTGCTTCAGGTGAGGAT AAGCTGTTGCCAAGTTTGATTGCACTGCTTCAGGTGAGGAT < 41bp 0.836574528594968 0.521905143199673 0.4565412 0.27681622 prediction 0.629338770790588 Functional Loss - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40343135 chr22:40343136 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6216 0 0 0 0 2 chromatin 0.438718585052104 0.438722548218003 0 0 hPsi_site_11633 iPseU_CNN:0;iRNA_PseU:0 11634 chrX 46320061 46320061 1 + A C rs734041 46320060 + 46320040 46320080 41 AGCCCTTTGGTTGTTGTCGTTATTGTTGTTTTTGAGAAACA AGCCCTTTGGTTGTTGTCGTTCTTGTTGTTTTTGAGAAACA < 41bp 0.814662734852386 0.473843512661449 0.33778155 0.23563331 prediction 0.629325469704771 Functional Loss - KRBOX4 ENSG00000147121 intronic Human protein_coding chrX:46320060 chrX:46320061 . . 0 22 hPsi_associated_SNPs_6217 0 0 0 0 0 Cytosol 0.438719328139243 0.43871872424977 0 0 hPsi_site_11634 iPseU_CNN:0;iRNA_PseU:0 11635 chr19 30476150 30476150 1 + A G THYM 30476149 + 30476129 30476169 41 GGAAGAAGGTAGATAATGACTATAATGCCCTTCGAGAAAGA GGAAGAAGGTAGATAATGACTGTAATGCCCTTCGAGAAAGA < 41bp 0.898239142224968 0.583585882793512 0.4424243 0.44002235 prediction 0.629306518862912 Functional Loss - URI1 ENSG00000105176 CDS Human protein_coding chr19:30476149 chr19:30476150 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_6218 0 0 1 0 2 Cytosol 0.438718593175856 0.438718593704799 0 0 hPsi_site_11635 iPseU_CNN:0;iRNA_PseU:0 11636 chr21 42767684 42767684 1 + A G LUSC 42767683 + 42767663 42767703 41 GAGGCAACCAAGAAAGAAATTACATTCTTTCAAACACATCC GAGGCAACCAAGAAAGAAATTGCATTCTTTCAAACACATCC < 41bp 0.814629254927465 0.417965857864397 0.27662674 0.19840422 prediction 0.629258509854931 Functional Loss - MX2 ENSG00000183486 CDS Human protein_coding chr21:42767683 chr21:42767684 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_6219 0 0 0 3 1 exosome 0.438784503672782 0.438719450576344 0 0 hPsi_site_11636 iPseU_CNN:0;iRNA_PseU:0 11637 chr2 153575469 153575469 1 + A G LUSC 153575468 + 153575448 153575488 41 TGGCCGGTCCAGGTCCTCTCTATTCTCTGCTCGCTGCTCTT TGGCCGGTCCAGGTCCTCTCTGTTCTCTGCTCGCTGCTCTT < 41bp 0.814618544056036 0.41124989055604 0.8749546 0.80203354 prediction 0.629237088112071 Functional Loss - ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153575468 chr2:153575469 nonsynonymous SNV 0.455 0 22 hPsi_associated_SNPs_6220 0 0 1 0 1 Ribosome 0.438718589906611 0.438718091863545 0.14584212 0 hPsi_site_11637 iPseU_CNN:0.14584212;iRNA_PseU:0 11638 chr1 92433762 92433762 1 + A G rs139011380 92433761 + 92433741 92433781 41 GAAGCTGTTTATGCAGAAATTATCTCAGATGCCACAAGAAG GAAGCTGTTTATGCAGAAATTGTCTCAGATGCCACAAGAAG < 41bp 0.894712978887881 0.580110143049148 0.43308258 0.32678416 prediction 0.629205671677467 Functional Loss - BRDT ENSG00000137948 CDS Human protein_coding chr1:92433761 chr1:92433762 synonymous SNV . 0 22 hPsi_associated_SNPs_6221 0 0 0 0 3 exosome 0.438718701639664 0.438718664519506 0 0 hPsi_site_11638 iPseU_CNN:0;iRNA_PseU:0 11639 chr4 146460992 146460992 1 + A G STAD 146460991 + 146460971 146461011 41 TGGTTCCAAGACACAGCGAATATAATCCTCAGCACAGCCTC TGGTTCCAAGACACAGCGAATGTAATCCTCAGCACAGCCTC < 41bp 0.90598400164948 0.591388162031651 0.78562164 0.63110465 prediction 0.629191679235658 Functional Loss - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146460991 chr4:146460992 nonsynonymous SNV 0.983 3 22 hPsi_associated_SNPs_6222 0 0 1 0 1 Endoplasmic reticulum 0.438724273678508 0.439352698333748 0.30903398 0 hPsi_site_11639 iPseU_CNN:0.30903398;iRNA_PseU:0 11640 chr3 183756553 183756553 1 + A G UCEC 183756552 + 183756532 183756572 41 AGGTGTGAAGGAGCCAGAGGTATCAGCAGGGCAGATGCCAG AGGTGTGAAGGAGCCAGAGGTGTCAGCAGGGCAGATGCCAG < 41bp 0.814563039668404 0.409258436872723 0.4122132 0.2236822 prediction 0.629126079336808 Functional Loss - HTR3D ENSG00000186090 CDS Human protein_coding chr3:183756552 chr3:183756553 synonymous SNV . 0 22 hPsi_associated_SNPs_6223 0 0 0 0 1 unknown 0.438711465416489 0.438728700004584 0 0 hPsi_site_11640 iPseU_CNN:0;iRNA_PseU:0 11641 chr15 38762536 38762536 1 + T G UCEC 38762535 + 38762515 38762555 41 ATCAGGAAGTTCAAGCTATGTTTGATACACTTGGTATACCC ATCAGGAAGTTCAAGCTATGTGTGATACACTTGGTATACCC < 41bp 0.832443019501688 0.517894797931462 0.5525743 0.4345098 prediction 0.629096443140453 Functional Loss - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38762535 chr15:38762536 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_6224 0 0 1 0 1 Cytosol 0.438719532683144 0.438519826747737 0.1051486 0 hPsi_site_11641 iPseU_CNN:0.1051486;iRNA_PseU:0 11642 chr7 63726841 63726841 1 + T G UCEC 63726840 + 63726820 63726860 41 GTGAAGAATGTGGCCAAGCCTTTAGCCGCTCCTCAACACTT GTGAAGAATGTGGCCAAGCCTGTAGCCGCTCCTCAACACTT < 41bp 0.819684407159089 0.50514611551013 0.32497764 0.29839456 prediction 0.629076583297918 Functional Loss - ZNF679 ENSG00000197123 CDS Human protein_coding chr7:63726840 chr7:63726841 nonsynonymous SNV 0.011 3 22 hPsi_associated_SNPs_6225 0 0 0 0 0 unknown 0.438688367851812 0.438706526949423 0 0 hPsi_site_11642 iPseU_CNN:0;iRNA_PseU:0 11643 chr8 81426201 81426201 1 + T G UCEC 81426200 + 81426180 81426220 41 GATAGGAATGTGAATGCAAATTTATTGGCTGAAGCTGGCAC GATAGGAATGTGAATGCAAATGTATTGGCTGAAGCTGGCAC < 41bp 0.814537702237109 0.487475189726384 0.3555333 0.28902498 prediction 0.629075404474218 Functional Loss - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81426200 chr8:81426201 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_6226 0 0 1 0 3 Endoplasmic reticulum 0.428494165308002 0.432890633013905 0 0 hPsi_site_11643 iPseU_CNN:0;iRNA_PseU:0 11644 chr17 38142913 38142913 1 + A G HNSC 38142912 + 38142892 38142932 41 TCCTGCCTGAAGTGGAAGCCTATCTCCAACTCCTCGTGGTC TCCTGCCTGAAGTGGAAGCCTGTCTCCAACTCCTCGTGGTC < 41bp 0.912007805070573 0.597472749560923 0.8721919 0.6276213 prediction 0.629070111019299 Functional Loss - PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142912 chr17:38142913 nonsynonymous SNV 0.968 5 22 hPsi_associated_SNPs_6227 0 0 1 0 2 Ribosome 0.438718593088977 0.438718597853162 0.4891412 0 hPsi_site_11644 iPseU_CNN:0.4891412;iRNA_PseU:0 11645 chr3 97887599 97887599 1 + A G rs146245474 97887598 + 97887578 97887618 41 TTGTTCTCACAGGATTTTTATATCAACCACAGTGGAAAATA TTGTTCTCACAGGATTTTTATGTCAACCACAGTGGAAAATA < 41bp 0.869751490428351 0.555229754914662 0.38390136 0.32476735 prediction 0.629043471027377 Functional Loss - OR5H15 ENSG00000233412 CDS Human protein_coding chr3:97887598 chr3:97887599 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_6228 0 0 0 0 0 unknown 0.438751029907778 0.438720012411229 0 0 hPsi_site_11645 iPseU_CNN:0;iRNA_PseU:0 11646 chr3 155649576 155649576 1 + A C rs61750370 155649575 + 155649555 155649595 41 GTGACTGTCGTTCCTACAGTTACGTGTGTGGAATCTCCAGT GTGACTGTCGTTCCTACAGTTCCGTGTGTGGAATCTCCAGT < 41bp 0.814520122472382 0.447708025866878 0.85229194 0.49339947 prediction 0.629040244944765 Functional Loss - GMPS ENSG00000163655 CDS Human protein_coding chr3:155649575 chr3:155649576 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6229 0 0 1 0 1 Nucleus 0.438718221543356 0.438719379121921 0.70458388 0 hPsi_site_11646 iPseU_CNN:0.70458388;iRNA_PseU:0 11647 chr17 37826579 37826579 1 + T G SKCM 37826578 + 37826558 37826598 41 CTATATCATGCCTGCCCACCTTCAGACAGGCGTAGATGATG CTATATCATGCCTGCCCACCTGCAGACAGGCGTAGATGATG < 41bp 0.814518442876109 0.495559481579904 0.27349138 0.21561447 prediction 0.629036885752219 Functional Loss - PNMT ENSG00000141744 CDS Human protein_coding chr17:37826578 chr17:37826579 synonymous SNV . 0 22 hPsi_associated_SNPs_6230 0 0 0 0 0 Cytosol 0.438721025197921 0.438688872398508 0 0 hPsi_site_11647 iPseU_CNN:0;iRNA_PseU:0 11648 chr6 142519697 142519697 1 + T G CESC 142519696 + 142519676 142519716 41 CAACTATACTGGAATACAGATTCCTCCGGGTGCACACGCTC CAACTATACTGGAATACAGATGCCTCCGGGTGCACACGCTC < 41bp 0.847638041362794 0.533133882643157 0.41149127 0.28149617 prediction 0.629008317439273 Functional Loss - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519696 chr6:142519697 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6231 0 0 1 0 1 Ribosome 0.438714820504207 0.439207447583644 0 0 hPsi_site_11648 iPseU_CNN:0;iRNA_PseU:0 11649 chr1 53068209 53068209 1 + A C UCEC 53068208 + 53068188 53068228 41 AACTGGTGTCGCTGGAGAAGTACCGCGGATCGGTGAGTGCG AACTGGTGTCGCTGGAGAAGTCCCGCGGATCGGTGAGTGCG < 41bp 0.865663632455299 0.551182386540032 0.7597784 0.23543707 prediction 0.628962491830533 Functional Loss - GPX7 ENSG00000116157 CDS Human protein_coding chr1:53068208 chr1:53068209 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6232 0 0 0 0 1 exosome 0.441546866222466 0.438659635606803 0.5195568 0 hPsi_site_11649 iPseU_CNN:0.5195568;iRNA_PseU:0 11650 chr1 210016864 210016864 1 + A G LUSC 210016863 + 210016843 210016883 41 TCATGTCTCACACGCTCATCTATATCCCCTCCTACTTTGAC TCATGTCTCACACGCTCATCTGTATCCCCTCCTACTTTGAC < 41bp 0.904132783759712 0.589653919105709 0.65054166 0.408034 prediction 0.628957729308006 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210016863 chr1:210016864 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_6233 0 0 1 0 1 Cytosol 0.43870824512002 0.43856072832693 0.30108332 0 hPsi_site_11650 iPseU_CNN:0.30108332;iRNA_PseU:0 Red cell distribution width 11651 chr1 110714798 110714798 1 + A G LUSC 110714797 + 110714777 110714817 41 AGCATCGGTGTGTGGCACTATATATGTCCCCGCCTGGGGGG AGCATCGGTGTGTGGCACTATGTATGTCCCCGCCTGGGGGG < 41bp 0.901899607363617 0.58743288274969 0.6125486 0.52361166 prediction 0.628933449227854 Functional Loss - SLC6A17 ENSG00000197106 CDS Human protein_coding chr1:110714797 chr1:110714798 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_6234 0 0 0 0 1 exosome 0.438718722484564 0.438718370063588 0.17787388 0 hPsi_site_11651 iPseU_CNN:0.17787388;iRNA_PseU:0 11652 chr11 31625340 31625340 1 + T G UCEC 31625339 + 31625319 31625359 41 GACCAGTATCATCTTCAAGATTTGGTCACTATTATGATGCA GACCAGTATCATCTTCAAGATGTGGTCACTATTATGATGCA < 41bp 0.814428268702379 0.482164051898518 0.3309684 0.3205373 prediction 0.628856537404759 Functional Loss - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31625339 chr11:31625340 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6235 0 0 0 0 2 Nucleus 0.438718540106584 0.438790379976046 0 0 hPsi_site_11652 iPseU_CNN:0;iRNA_PseU:0 11653 chr7 127234013 127234013 1 + A C UCEC 127234012 + 127233992 127234032 41 ACCTTTGAGGCATGCAAGAATACAGTCACTGCAACTGCGAA ACCTTTGAGGCATGCAAGAATCCAGTCACTGCAACTGCGAA < 41bp 0.864188461931699 0.549762558494595 0.33895564 0.30852556 prediction 0.628851806874208 Functional Loss - FSCN3 ENSG00000106328 CDS Human protein_coding chr7:127234012 chr7:127234013 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_6236 0 0 0 0 1 exosome 0.43871121313584 0.43871820958897 0 0 hPsi_site_11653 iPseU_CNN:0;iRNA_PseU:0 11654 chr18 33718276 33718276 1 + A G COAD 33718275 + 33718255 33718295 41 AAGGCCATGAAGGACCTGTTTATGCGGTGCATGCTGTTTAC AAGGCCATGAAGGACCTGTTTGTGCGGTGCATGCTGTTTAC < 41bp 0.814416843197859 0.392660772893446 0.4095765 0.33680972 prediction 0.628833686395717 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33718275 chr18:33718276 nonsynonymous SNV 0.721 0 22 hPsi_associated_SNPs_6237 0 0 1 1 1 Nucleus 0.438718427807663 0.438717362434126 0 0 hPsi_site_11654 iPseU_CNN:0;iRNA_PseU:0 11655 chr2 74687742 74687742 1 + A G UCEC 74687741 + 74687721 74687761 41 GGACTACTCCCCGTGTGCACTACCCCCAGAGTCTGTACCGC GGACTACTCCCCGTGTGCACTGCCCCCAGAGTCTGTACCGC < 41bp 0.904142750409573 0.589728664903918 0.71370214 0.24496567 prediction 0.62882817101131 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687741 chr2:74687742 synonymous SNV . 0 22 hPsi_associated_SNPs_6238 0 0 1 0 0 cytosol 0.438718593178364 0.438718593336746 0.42740428 0 hPsi_site_11655 iPseU_CNN:0.42740428;iRNA_PseU:0 11656 chr8 99039747 99039747 1 + A C STAD 99039746 + 99039726 99039766 41 GCAGTTTGTCACTGGAATTATAGATTCCTTGACAATTTCCC GCAGTTTGTCACTGGAATTATCGATTCCTTGACAATTTCCC < 41bp 0.814406241846167 0.439631654584542 0.3989476 0.59727126 prediction 0.628812483692333 Functional Loss - MATN2 ENSG00000132561 CDS Human protein_coding chr8:99039746 chr8:99039747 synonymous SNV . 0 22 hPsi_associated_SNPs_6239 0 0 0 0 0 Cytosol 0.438718596572026 0.438808054195456 0 0 hPsi_site_11656 iPseU_CNN:0;iRNA_PseU:0 11657 chr12 55726049 55726049 1 + A G UCEC 55726048 + 55726028 55726068 41 TTACAACTATCTTGTTCAGATACATGGCTCCTAGAAGTAAT TTACAACTATCTTGTTCAGATGCATGGCTCCTAGAAGTAAT < 41bp 0.879663621526364 0.565264828441348 0.45388302 0.2695438 prediction 0.628797586170031 Functional Loss - OR6C3 ENSG00000205329 CDS Human protein_coding chr12:55726048 chr12:55726049 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_6240 0 0 0 0 0 unknown 0.438718421212493 0.438718592933743 0 0 hPsi_site_11657 iPseU_CNN:0;iRNA_PseU:0 11658 chr19 34263913 34263913 1 + A G LUAD 34263912 + 34263892 34263932 41 GGCAGCGCACCTACGACTTCTACTACATGGATTACCTGATG GGCAGCGCACCTACGACTTCTGCTACATGGATTACCTGATG < 41bp 0.814372615769517 0.405977718621227 0.27838832 0.22177306 prediction 0.628745231539034 Functional Loss - CHST8 ENSG00000124302 CDS Human protein_coding chr19:34263912 chr19:34263913 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6241 0 0 0 0 0 exosome 0.438582205258591 0.438673596989582 0 0 hPsi_site_11658 iPseU_CNN:0;iRNA_PseU:0 11659 chr8 104442891 104442891 1 + A G STAD 104442890 + 104442870 104442910 41 AGGAATATAGTACTGTACGATATGAGGCAAGCTACTCCTTT AGGAATATAGTACTGTACGATGTGAGGCAAGCTACTCCTTT < 41bp 0.814362067001428 0.402903842485426 0.35238123 0.26540905 prediction 0.628724134002856 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104442890 chr8:104442891 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_6242 0 0 1 0 2 Nucleus 0.438718402921721 0.438718525908233 0 0 hPsi_site_11659 iPseU_CNN:0;iRNA_PseU:0 11660 chr13 27250698 27250698 1 + A G UCEC 27250697 + 27250677 27250717 41 GGACATCAGGAGCAAAAGCGTATAGATGGCACCACCCGTGA GGACATCAGGAGCAAAAGCGTGTAGATGGCACCACCCGTGA < 41bp 0.814352789254372 0.396003405649571 0.8762619 0.46999744 prediction 0.628705578508744 Functional Loss - WASF3 ENSG00000132970 CDS Human protein_coding chr13:27250697 chr13:27250698 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6243 0 0 1 0 1 cytosol 0.43877788861172 0.438732452871817 0.7525238 0 hPsi_site_11660 iPseU_CNN:0.7525238;iRNA_PseU:0 11661 chr16 3076562 3076562 1 + A G UCEC 3076561 + 3076541 3076581 41 GGAGACTGTCAGTTGCACACTATGGACCTTGAAACTGGGAC GGAGACTGTCAGTTGCACACTGTGGACCTTGAAACTGGGAC < 41bp 0.909403186311825 0.595062589535163 0.22615153 0.2610947 prediction 0.628681193553325 Functional Loss - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3076561 chr16:3076562 nonsynonymous SNV 0.663 1 22 hPsi_associated_SNPs_6244 0 0 1 0 2 Ribosome 0.438763307500801 0.438734044053384 0 0 hPsi_site_11661 iPseU_CNN:0;iRNA_PseU:0 11662 chr2 29375604 29375604 1 + A G HNSC 29375603 + 29375583 29375623 41 GCAAAAGGTCGAAGGAAGAATATAACACACACTCCTTCTAC GCAAAAGGTCGAAGGAAGAATGTAACACACACTCCTTCTAC < 41bp 0.814330919172521 0.396668370280041 0.5147377 0.3213046 prediction 0.628661838345042 Functional Loss - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29375603 chr2:29375604 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_6245 0 0 1 1 2 nucleus 0.438743969912688 0.438791360738953 0.0294753999999999 0 hPsi_site_11662 iPseU_CNN:0.0294753999999999;iRNA_PseU:0 11663 chr17 71165503 71165503 1 + A G BLCA 71165502 + 71165482 71165522 41 CAATGGAAGCCACACATGGCTATCCATTCCATTTGACCTCA CAATGGAAGCCACACATGGCTGTCCATTCCATTTGACCTCA < 41bp 0.893760553919708 0.579448188904242 0.5545615 0.3001408 prediction 0.628624730030931 Functional Loss - SSTR2 ENSG00000180616 CDS Human protein_coding chr17:71165502 chr17:71165503 synonymous SNV . 0 22 hPsi_associated_SNPs_6246 0 0 0 0 0 nucleolus 0.438634363012105 0.438899613448914 0.109123 0 hPsi_site_11663 iPseU_CNN:0.109123;iRNA_PseU:0 11664 chr7 102584816 102584816 1 + A G rs564698990 102584815 + 102584795 102584835 41 ACAACATTCACTACCTCTACTACTGGTTAAAGCACCACTAC ACAACATTCACTACCTCTACTGCTGGTTAAAGCACCACTAC < 41bp 0.814311394094313 0.413371486318986 0.23126331 0.19945726 prediction 0.628622788188626 Functional Loss - LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102584815 chr7:102584816 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6247 0 0 1 4 0 Cytosol 0.438563860012471 0.43858510072128 0 0 hPsi_site_11664 iPseU_CNN:0;iRNA_PseU:0 11665 chrX 106016335 106016335 1 + T G UCEC 106016334 + 106016314 106016354 41 CGGCGGCAACTGTGGGCTATTTTATCTTTTATTCTGCTCGA CGGCGGCAACTGTGGGCTATTGTATCTTTTATTCTGCTCGA < 41bp 0.827711578896644 0.513400859967555 0.21745953 0.26296383 prediction 0.628621437858177 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:106016334 chrX:106016335 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6248 0 0 1 0 1 cytosol 0.438718589454463 0.438718956656577 0 0 hPsi_site_11665 iPseU_CNN:0;iRNA_PseU:0 11666 chr9 36120698 36120698 1 + T G COAD 36120697 + 36120677 36120717 41 TGTGCTGGGATGTTAAGAGTTTTATTTGACAAAGAAAAACT TGTGCTGGGATGTTAAGAGTTGTATTTGACAAAGAAAAACT < 41bp 0.818432611915499 0.504136858496507 0.31615782 0.2565914 prediction 0.628591506837984 Functional Loss - RECK ENSG00000122707 CDS Human protein_coding chr9:36120697 chr9:36120698 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_6249 0 0 0 0 2 exosome 0.438777608686403 0.438139250223113 0 0 hPsi_site_11666 iPseU_CNN:0;iRNA_PseU:0 11667 chr9 140127502 140127502 1 + A G STAD 140127501 + 140127481 140127521 41 CATCATCATGGGTGTCAACGTAGGCACATCCATCACCAGCA CATCATCATGGGTGTCAACGTGGGCACATCCATCACCAGCA < 41bp 0.814293968381429 0.386909506863915 0.3384359 0.19163123 prediction 0.628587936762858 Functional Loss - SLC34A3 ENSG00000198569 CDS Human protein_coding chr9:140127501 chr9:140127502 synonymous SNV . 0 22 hPsi_associated_SNPs_6250 0 0 0 0 3 exosome 0.438717800675653 0.438795828320687 0 0 hPsi_site_11667 iPseU_CNN:0;iRNA_PseU:0 11668 chr11 6891024 6891024 1 + A G STAD 6891023 + 6891003 6891043 41 GCCTACTGAAATACAGTCATTACTCTTTCTGACATTTCTAA GCCTACTGAAATACAGTCATTGCTCTTTCTGACATTTCTAA < 41bp 0.81429383308937 0.427128199654673 0.35256884 0.3016384 prediction 0.628587666178739 Functional Loss - OR10A2 ENSG00000170790 CDS Human protein_coding chr11:6891023 chr11:6891024 synonymous SNV . 0 22 hPsi_associated_SNPs_6251 0 0 0 0 0 unknown 0.436433954230723 0.433910893992987 0 0 hPsi_site_11668 iPseU_CNN:0;iRNA_PseU:0 11669 chrX 150841032 150841032 1 + A G UCEC 150841031 + 150841011 150841051 41 CAATCACCCTGTTAGATTTTTACAGGCCCAACCCATTGTTC CAATCACCCTGTTAGATTTTTGCAGGCCCAACCCATTGTTC < 41bp 0.814293328392199 0.399461577131177 0.79641795 0.3803631 prediction 0.628586656784398 Functional Loss - PASD1 ENSG00000166049 CDS Human protein_coding chrX:150841031 chrX:150841032 synonymous SNV . 0 22 hPsi_associated_SNPs_6252 0 0 0 0 0 cytosol 0.440938588415409 0.438701828688921 0.5928359 0 hPsi_site_11669 iPseU_CNN:0.5928359;iRNA_PseU:0 11670 chr7 128484816 128484816 1 + A G rs3734973 128484815 + 128484795 128484835 41 AGGTGGCCTGGGGCTGACCGTAGAGGGCCCCTGCGAGGCCA AGGTGGCCTGGGGCTGACCGTGGAGGGCCCCTGCGAGGCCA < 41bp 0.814283923010763 0.399784078458788 0.63128614 0.31931633 prediction 0.628567846021526 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128484815 chr7:128484816 synonymous SNV . 0 22 hPsi_associated_SNPs_6253 1 0 0 0 0 chromatin 0.440430330497322 0.438730895804986 0.26257228 0 hPsi_site_11670 iPseU_CNN:0.26257228;iRNA_PseU:0 11671 chr11 64884693 64884693 1 + T G PRAD 64884694 - 64884674 64884714 41 CAGCTTCTGGAGGAGCTGGATAATGCCCCGGGTAGTGACGC CAGCTTCTGGAGGAGCTGGATCATGCCCCGGGTAGTGACGC < 41bp 0.839909834105683 0.525654370642749 0.47777465 0.3339886 prediction 0.628510926925869 Functional Loss - ZNHIT2 ENSG00000174276 CDS Human protein_coding chr11:64884694 chr11:64884693 nonsynonymous SNV 0.079 0 22 hPsi_associated_SNPs_6254 0 0 1 0 0 Ribosome 0.438720312254289 0.438731256104902 0 0 hPsi_site_11671 iPseU_CNN:0;iRNA_PseU:0 11672 chr4 76708257 76708257 1 + A G UCEC 76708256 + 76708236 76708276 41 CCCACCAACCCTCCTGGTGCTACCAGTAGCTGCCAGAAGGC CCCACCAACCCTCCTGGTGCTGCCAGTAGCTGCCAGAAGGC < 41bp 0.814247129453474 0.385630553037157 0.37705037 0.1806716 prediction 0.628494258906948 Functional Loss - USO1 ENSG00000138768 CDS Human protein_coding chr4:76708256 chr4:76708257 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_6255 0 0 1 0 2 Nucleus 0.438718593019059 0.438718593016962 0 0 hPsi_site_11672 iPseU_CNN:0;iRNA_PseU:0 11673 chr11 5510598 5510598 1 + A G rs7950082 5510597 + 5510577 5510617 41 CCATTCTCATTGCCATTTCCTATGGCTTTATCCTCCATGCA CCATTCTCATTGCCATTTCCTGTGGCTTTATCCTCCATGCA < 41bp 0.898125336916882 0.583891641478631 0.28701207 0.2904852 prediction 0.628467390876503 Functional Loss - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510597 chr11:5510598 nonsynonymous SNV 0.976 2 22 hPsi_associated_SNPs_6256 0 0 0 0 0 chromatin 0.439088566986758 0.438733815447887 0 0 hPsi_site_11673 iPseU_CNN:0;iRNA_PseU:0 11674 chr6 143810326 143810326 1 + A C HNSC 143810325 + 143810305 143810345 41 AAGACTTTGCTGCTAATGTGTATGAAGCTTTTAGTACCCCT AAGACTTTGCTGCTAATGTGTCTGAAGCTTTTAGTACCCCT < 41bp 0.814232869690586 0.465754598955929 0.28353843 0.22788006 prediction 0.628465739381172 Functional Loss - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143810325 chr6:143810326 nonsynonymous SNV 0.890 4 22 hPsi_associated_SNPs_6257 0 0 1 0 1 chromatin 0.438721819243081 0.438716652952785 0 0 hPsi_site_11674 iPseU_CNN:0;iRNA_PseU:0 11675 chr1 35847326 35847326 1 + T G UCEC 35847325 + 35847305 35847345 41 AGAGGGACAGTCTAAGAAGTTTTGTAGTTCATCGTGTATCA AGAGGGACAGTCTAAGAAGTTGTGTAGTTCATCGTGTATCA < 41bp 0.814229309293868 0.49223397218967 0.55601317 0.5303475 prediction 0.628458618587737 Functional Loss - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35847325 chr1:35847326 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_6258 0 0 1 0 1 Cytosol 0.438691488353726 0.438872105092185 0.0513313399999999 0 hPsi_site_11675 iPseU_CNN:0.0513313399999999;iRNA_PseU:0 11676 chr4 6698706 6698706 1 + A C rs11733989 6698705 + 6698685 6698725 41 GGTGGACTTCAGTGAGTTCATAGTGTTCGTGGCTGCAATCA GGTGGACTTCAGTGAGTTCATCGTGTTCGTGGCTGCAATCA < 41bp 0.860302016892167 0.546073712628934 0.30013138 0.18316504 prediction 0.628456608526465 Functional Loss - S100P ENSG00000163993 CDS Human protein_coding chr4:6698705 chr4:6698706 synonymous SNV . 0 22 hPsi_associated_SNPs_6259 0 0 1 0 0 Ribosome 0.438594305165318 0.438745301923488 0 0 hPsi_site_11676 iPseU_CNN:0;iRNA_PseU:0 11677 chr6 7880449 7880449 1 + A G CHOL 7880448 + 7880428 7880468 41 TTCACCTTATGAACCCCGAGTATGTCCCCAAACCGTGCTGT TTCACCTTATGAACCCCGAGTGTGTCCCCAAACCGTGCTGT < 41bp 0.814218775751325 0.406775801774061 0.43450522 0.3154888 prediction 0.628437551502651 Functional Loss - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7880448 chr6:7880449 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_6260 0 0 0 0 1 Ribosome 0.437886591559984 0.438268494633389 0 0 hPsi_site_11677 iPseU_CNN:0;iRNA_PseU:0 11678 chr5 132440268 132440268 1 + A C rs117408810 132440267 + 132440247 132440287 41 TTTCGGGGAGGGGAAATAGGTAATGTATGGAGCATTTTCAC TTTCGGGGAGGGGAAATAGGTCATGTATGGAGCATTTTCAC < 41bp 0.841676948435519 0.527474541514568 0.59481 0.23626542 prediction 0.628404813841902 Functional Loss - HSPA4 ENSG00000170606 UTR3 Human protein_coding chr5:132440267 chr5:132440268 . . 0 22 hPsi_associated_SNPs_6261 0 0 1 0 0 Cytosol 0.438721496568645 0.438718554215745 0.18962 0 hPsi_site_11678 iPseU_CNN:0.18962;iRNA_PseU:0 11679 chr7 70886037 70886037 1 + A G STAD 70886036 + 70886016 70886056 41 GCTGGGAGCTGTGGTGCATGTACATCAGCCCCCCAAAAGAC GCTGGGAGCTGTGGTGCATGTGCATCAGCCCCCCAAAAGAC < 41bp 0.814188406321871 0.419910380077352 0.7067169 0.2044617 prediction 0.628376812643743 Functional Loss - GALNT17 ENSG00000185274 CDS Human protein_coding chr7:70886036 chr7:70886037 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6262 0 0 0 0 1 unknown 0.438718451426572 0.43871859274581 0.4134338 0 hPsi_site_11679 iPseU_CNN:0.4134338;iRNA_PseU:0 11680 chr20 37202893 37202893 1 + A C LUAD 37202892 + 37202872 37202912 41 GGAGCCACTGGAAAATTTAATATGGTCATCCCTCTTGTGGA GGAGCCACTGGAAAATTTAATCTGGTCATCCCTCTTGTGGA < 41bp 0.85964158924959 0.545456443620745 0.4823043 0.5998267 prediction 0.628370291257689 Functional Loss - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37202892 chr20:37202893 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6263 0 0 1 0 1 Nucleus 0.438718592356714 0.438718574889482 0 0 hPsi_site_11680 iPseU_CNN:0;iRNA_PseU:0 11681 chr5 148747813 148747813 1 + A G PRAD 148747812 + 148747792 148747832 41 TTCCCCTTTGCCAACATCCTTACCACAGATTTCCCCAGCTT TTCCCCTTTGCCAACATCCTTGCCACAGATTTCCCCAGCTT < 41bp 0.904795109386475 0.590610582950009 0.545684 0.28843594 prediction 0.628369052872932 Functional Loss - PCYOX1L ENSG00000145882 CDS Human protein_coding chr5:148747812 chr5:148747813 nonsynonymous SNV 0.850 2 22 hPsi_associated_SNPs_6264 0 0 1 0 0 Ribosome 0.422463543927319 0.433769818792166 0.0913679999999999 0 hPsi_site_11681 iPseU_CNN:0.0913679999999999;iRNA_PseU:0 11682 chr6 35207570 35207570 1 + A G BLCA 35207569 + 35207549 35207589 41 AACAACGGGGGCTGTGACCATATTTGCCGCAACACAGTGGG AACAACGGGGGCTGTGACCATGTTTGCCGCAACACAGTGGG < 41bp 0.814182514859538 0.38948855557667 0.28643036 0.18268481 prediction 0.628365029719076 Functional Loss - SCUBE3 ENSG00000146197 CDS Human protein_coding chr6:35207569 chr6:35207570 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6265 0 0 0 0 1 Nucleus 0.438567005770328 0.438147894827094 0 0 hPsi_site_11682 iPseU_CNN:0;iRNA_PseU:0 11683 chr6 74104793 74104793 1 + T G rs930807 74104794 - 74104774 74104814 41 GGCCACGGCCTCCGGGGGCCTAGAGGTGCCTCTCCAGCGAC GGCCACGGCCTCCGGGGGCCTCGAGGTGCCTCTCCAGCGAC < 41bp 0.814168068797014 0.454016498721473 0.33485 0.19278237 prediction 0.628336137594028 Functional Loss - DDX43 ENSG00000080007 CDS Human protein_coding chr6:74104794 chr6:74104793 synonymous SNV . 0 22 hPsi_associated_SNPs_6266 0 0 0 0 0 exosome 0.438718592995107 0.438718590477926 0 0 hPsi_site_11683 iPseU_CNN:0;iRNA_PseU:0 11684 chr1 76226871 76226871 1 + A G UCEC 76226870 + 76226850 76226890 41 TTGAACTAGCTAGAATGAGTTACCAGAGAGCAGCTTGGGAG TTGAACTAGCTAGAATGAGTTGCCAGAGAGCAGCTTGGGAG < 41bp 0.900611688095387 0.586460084366474 0.65891373 0.30014297 prediction 0.628303207457826 Functional Loss - ACADM ENSG00000117054 CDS Human protein_coding chr1:76226870 chr1:76226871 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6267 0 0 1 4 1 Cytosol 0.438704631575197 0.438883597509521 0.31782746 0 hPsi_site_11684 iPseU_CNN:0.31782746;iRNA_PseU:0 11685 chr7 89793949 89793949 1 + A G COAD 89793948 + 89793928 89793968 41 TGTCCTGATATTTAAAAGCATACTATTCCTGCCATGCTTGA TGTCCTGATATTTAAAAGCATGCTATTCCTGCCATGCTTGA < 41bp 0.893342180679815 0.579213333184629 0.60601187 0.3561175 prediction 0.628257694990373 Functional Loss - STEAP1 ENSG00000164647 CDS Human protein_coding chr7:89793948 chr7:89793949 nonsynonymous SNV 0.057 1 22 hPsi_associated_SNPs_6268 0 0 1 0 0 Endoplasmic reticulum 0.438718641627809 0.43871860297014 0.21202374 0 hPsi_site_11685 iPseU_CNN:0.21202374;iRNA_PseU:0 11686 chr20 4680176 4680176 1 + A G STAD 4680175 + 4680155 4680195 41 AGTCAGTGGAACAAGCCGAGTAAGCCAAAAACCAACATGAA AGTCAGTGGAACAAGCCGAGTGAGCCAAAAACCAACATGAA < 41bp 0.814119780242768 0.395719384301193 0.66885126 0.32129258 prediction 0.628239560485536 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680175 chr20:4680176 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_6269 0 0 1 0 0 Ribosome 0.438534769035403 0.438672071574567 0.33770252 0 hPsi_site_11686 iPseU_CNN:0.33770252;iRNA_PseU:0 11687 chr16 3254605 3254605 1 + A G rs563043868 3254604 + 3254584 3254624 41 TCCTCCTAGCTGTGATGGCCTATGACCACTTTGTCGCCGTG TCCTCCTAGCTGTGATGGCCTGTGACCACTTTGTCGCCGTG < 41bp 0.89763360860381 0.583527457420759 0.48844737 0.23301071 prediction 0.628212302366103 Functional Loss - OR1F1 ENSG00000168124 CDS Human protein_coding chr16:3254604 chr16:3254605 nonsynonymous SNV 0.655 2 22 hPsi_associated_SNPs_6270 0 0 0 0 0 exosome 0.438819747267721 0.438544114148246 0 0 hPsi_site_11687 iPseU_CNN:0;iRNA_PseU:0 11688 chr11 55541788 55541788 1 + A C LUAD 55541787 + 55541767 55541807 41 CAATGCTGAACCCATTGATCTACAGCCTTAGGAACAAAGAT CAATGCTGAACCCATTGATCTCCAGCCTTAGGAACAAAGAT < 41bp 0.814097885041766 0.475954183361981 0.4091705 0.2646755 prediction 0.628195770083532 Functional Loss - OR5D13 ENSG00000198877 CDS Human other chr11:55541787 chr11:55541788 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_6271 0 0 0 0 0 unknown 0.438730852571323 0.438718592986152 0 0 hPsi_site_11688 iPseU_CNN:0;iRNA_PseU:0 11689 chr16 2284352 2284352 1 + A G ACC 2284351 + 2284331 2284371 41 TCCACTCAGACGAGCGGCCCTACCCTTGTCCCAAGTGTGGC TCCACTCAGACGAGCGGCCCTGCCCTTGTCCCAAGTGTGGC < 41bp 0.814088161724117 0.39513725258818 0.51753455 0.24583912 prediction 0.628176323448233 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284351 chr16:2284352 nonsynonymous SNV 0.965 3 22 hPsi_associated_SNPs_6272 0 0 1 0 1 chromatin 0.438718579644474 0.438706506044346 0.0350691000000001 0 hPsi_site_11689 iPseU_CNN:0.0350691000000001;iRNA_PseU:0 11690 chr7 38254661 38254661 1 + A G COAD 38254660 + 38254640 38254680 41 TTTTCGATTTAAAGTGTTAATACTTGCATATGCTGTGTGCA TTTTCGATTTAAAGTGTTAATGCTTGCATATGCTGTGTGCA < 41bp 0.81408686680436 0.399410347869494 0.31878495 0.21623427 prediction 0.628173733608721 Functional Loss - STARD3NL ENSG00000010270 CDS Human protein_coding chr7:38254660 chr7:38254661 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6273 0 0 1 0 2 chromatin 0.43699258647136 0.434396301279683 0 0 hPsi_site_11690 iPseU_CNN:0;iRNA_PseU:0 11691 chr9 90266530 90266530 1 + A G UCEC 90266529 + 90266509 90266549 41 GCCAAGGGTGTTTCGTCGATTATCAAGACAGGCACGGCAAT GCCAAGGGTGTTTCGTCGATTGTCAAGACAGGCACGGCAAT < 41bp 0.814085805549899 0.398721748878306 0.89801705 0.4927973 prediction 0.628171611099798 Functional Loss - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90266529 chr9:90266530 nonsynonymous SNV 0.580 1 22 hPsi_associated_SNPs_6274 0 0 1 0 1 Ribosome 0.439566489558699 0.438716022992631 0.7960341 0 hPsi_site_11691 iPseU_CNN:0.7960341;iRNA_PseU:0 11692 chr17 80895769 80895769 1 + A G rs3785521 80895768 + 80895748 80895788 41 GTGTAGGCACAGTGCAGATGTACGCACACACACACCTCCGG GTGTAGGCACAGTGCAGATGTGCGCACACACACACCTCCGG < 41bp 0.814046518687653 0.401050162045833 0.55646056 0.2916413 prediction 0.628093037375306 Functional Loss - TBCD ENSG00000141556 CDS Human protein_coding chr17:80895768 chr17:80895769 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6275 0 0 0 0 2 Nucleus 0.445370129410776 0.436455913495292 0.11292112 0 hPsi_site_11692 iPseU_CNN:0.11292112;iRNA_PseU:0 11693 chrX 69502144 69502144 1 + A G UCEC 69502143 + 69502123 69502163 41 AGGCTGCCGAAAGAACGGAATACCAGTCTCTGTGCAAATCT AGGCTGCCGAAAGAACGGAATGCCAGTCTCTGTGCAAATCT < 41bp 0.814031793356402 0.396915887954637 0.704555 0.32400358 prediction 0.628063586712805 Functional Loss - RAB41 ENSG00000147127 CDS Human protein_coding chrX:69502143 chrX:69502144 nonsynonymous SNV 0.135 1 22 hPsi_associated_SNPs_6276 0 0 0 0 1 exosome 0.440064389063711 0.438726552174674 0.40911 0 hPsi_site_11693 iPseU_CNN:0.40911;iRNA_PseU:0 11694 chr1 109778719 109778719 1 + A G SARC 109778718 + 109778698 109778738 41 ATTCCTTACCACATTGTGAATATTGTCTCAGGTATGGGACC ATTCCTTACCACATTGTGAATGTTGTCTCAGGTATGGGACC < 41bp 0.891198098995615 0.577178724886293 0.3310163 0.25879025 prediction 0.628038748218643 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109778718 chr1:109778719 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6277 0 0 1 0 1 Ribosome 0.43872081437448 0.438720822022754 0 0 hPsi_site_11694 iPseU_CNN:0;iRNA_PseU:0 11695 chr6 110501682 110501682 1 + A G COAD 110501681 + 110501661 110501701 41 TTGCAGCTCTGGCCGCTTCCTATGGTTCGGGTTCAGGGTCC TTGCAGCTCTGGCCGCTTCCTGTGGTTCGGGTTCAGGGTCC < 41bp 0.813993162705194 0.412444918898718 0.50356096 0.33753976 prediction 0.627986325410388 Functional Loss - CDC40 ENSG00000168438 CDS Human protein_coding chr6:110501681 chr6:110501682 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6278 0 0 1 0 0 chromatin 0.438718592994734 0.438718592995067 0.00712191999999989 0 hPsi_site_11695 iPseU_CNN:0.00712191999999989;iRNA_PseU:0 11696 chr14 21795857 21795857 1 + A G STAD 21795856 + 21795836 21795876 41 AACTGGATTGGAAGTTTCCCTACATACCCCCTGAGAGCTTC AACTGGATTGGAAGTTTCCCTGCATACCCCCTGAGAGCTTC < 41bp 0.813982899569203 0.399867394813325 0.63276047 0.22279128 prediction 0.627965799138405 Functional Loss - RPGRIP1 ENSG00000092200 CDS Human protein_coding chr14:21795856 chr14:21795857 nonsynonymous SNV 0.093 4 22 hPsi_associated_SNPs_6279 0 0 0 0 1 chromatin 0.438711494918608 0.438718484907929 0.26552094 0 hPsi_site_11696 iPseU_CNN:0.26552094;iRNA_PseU:0 11697 chr4 74702948 74702948 1 + T G LUAD 74702947 + 74702927 74702967 41 CTGAAGAACGGGAAGCAAGTTTGTCTGGACCCGGAAGCCCC CTGAAGAACGGGAAGCAAGTTGGTCTGGACCCGGAAGCCCC < 41bp 0.813980599741145 0.482341673283079 0.31275153 0.23805007 prediction 0.627961199482291 Functional Loss - CXCL6 ENSG00000124875 CDS Human protein_coding chr4:74702947 chr4:74702948 nonsynonymous SNV 0.010 4 22 hPsi_associated_SNPs_6280 0 0 0 0 2 exosome 0.438722272648695 0.438718592995102 0 0 hPsi_site_11697 iPseU_CNN:0;iRNA_PseU:0 11698 chr3 51747018 51747018 1 + T G LGG 51747017 + 51746997 51747037 41 CCTCCTACCCCATCAGTGACTTTGCCTCCTACTTCCAGAGC CCTCCTACCCCATCAGTGACTGTGCCTCCTACTTCCAGAGC < 41bp 0.813961181158284 0.488775108012086 0.83452207 0.38477468 prediction 0.627922362316568 Functional Loss - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51747017 chr3:51747018 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6281 0 0 0 1 0 Endoplasmic reticulum 0.438707938231462 0.438718558250147 0.66904414 0 hPsi_site_11698 iPseU_CNN:0.66904414;iRNA_PseU:0 11699 chrX 101818576 101818576 1 + A G UCEC 101818575 + 101818555 101818595 41 TGTTCTTACCTGATAGCTATTATCTTTGAACTTGTGCGACA TGTTCTTACCTGATAGCTATTGTCTTTGAACTTGTGCGACA < 41bp 0.81394324848516 0.404006301339645 0.63325155 0.32206404 prediction 0.62788649697032 Functional Loss - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101818575 chrX:101818576 . . 0 22 hPsi_associated_SNPs_6282 0 0 0 0 1 unknown 0.451617117775457 0.44058425170567 0.2665031 0 hPsi_site_11699 iPseU_CNN:0.2665031;iRNA_PseU:0 11700 chr11 55944919 55944919 1 + A G COAD 55944918 + 55944898 55944938 41 GAACAAGAGAAAGTGGTTTCTATGTTCTATACGCTAGGGAT GAACAAGAGAAAGTGGTTTCTGTGTTCTATACGCTAGGGAT < 41bp 0.813942885803399 0.434192785454476 0.27618694 0.18895176 prediction 0.627885771606797 Functional Loss - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944918 chr11:55944919 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_6283 0 0 0 0 0 unknown 0.438718592995093 0.43871859299465 0 0 hPsi_site_11700 iPseU_CNN:0;iRNA_PseU:0 11701 chr6 96053788 96053788 1 + T G COAD 96053787 + 96053767 96053807 41 ATTCTCCTTATGATGGACTGTTTATTGCCCTTCTGGTAGAA ATTCTCCTTATGATGGACTGTGTATTGCCCTTCTGGTAGAA < 41bp 0.813941147863764 0.499978488929109 0.3502789 0.26956314 prediction 0.627882295727529 Functional Loss - MANEA ENSG00000172469 CDS Human protein_coding chr6:96053787 chr6:96053788 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6284 0 0 1 0 0 Ribosome 0.438712031157479 0.435271716686509 0 0 hPsi_site_11701 iPseU_CNN:0;iRNA_PseU:0 11702 chr8 95837232 95837232 1 + T G LUAD 95837231 + 95837211 95837251 41 ATAACAAGAGAAATCGTATTTTAAAACTACTTGCTCTTAAA ATAACAAGAGAAATCGTATTTGAAAACTACTTGCTCTTAAA < 41bp 0.818755364370906 0.504816872198392 0.35196447 0.27566248 prediction 0.627876984345028 Functional Loss - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95837231 chr8:95837232 stopgain 0.998 1 22 hPsi_associated_SNPs_6285 0 0 1 0 1 Nucleus 0.438708136674402 0.438690003831354 0 0 hPsi_site_11702 iPseU_CNN:0;iRNA_PseU:0 11703 chr10 93011118 93011118 1 + A G COAD 93011117 + 93011097 93011137 41 AAAATGAAGATGATAAAGATTATCACAGAAGTGACCCACAA AAAATGAAGATGATAAAGATTGTCACAGAAGTGACCCACAA < 41bp 0.813925408766855 0.418178025887212 0.27805686 0.26946598 prediction 0.62785081753371 Functional Loss - PCGF5 ENSG00000180628 CDS Human protein_coding chr10:93011117 chr10:93011118 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6286 0 0 1 0 2 Cytosol 0.43971601296499 0.442878287487212 0 0 hPsi_site_11703 iPseU_CNN:0;iRNA_PseU:0 11704 chr1 158057861 158057861 1 + A G UCEC 158057860 + 158057840 158057880 41 GCTATGAGACAAATGTGGATTATTCCTTTTTCACGGAGCCT GCTATGAGACAAATGTGGATTGTTCCTTTTTCACGGAGCCT < 41bp 0.909886863754615 0.595965954435387 0.6155947 0.51117754 prediction 0.627841818638455 Functional Loss - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158057860 chr1:158057861 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6287 0 0 1 0 2 cytosol 0.438717871851881 0.438715239087864 0.20883432 0 hPsi_site_11704 iPseU_CNN:0.20883432;iRNA_PseU:0 11705 chr17 38024628 38024628 1 + A G UCEC 38024627 + 38024607 38024647 41 GATGATGCGAACGTGCGTCCTACTCTCCGCGGTGCTCTGGT GATGATGCGAACGTGCGTCCTGCTCTCCGCGGTGCTCTGGT < 41bp 0.813881314633544 0.421577359875705 0.66291857 0.24959674 prediction 0.627762629267087 Functional Loss - ZPBP2 ENSG00000186075 CDS Human protein_coding chr17:38024627 chr17:38024628 synonymous SNV . 0 22 hPsi_associated_SNPs_6288 0 0 0 0 1 exosome 0.413122388643987 0.380513731522499 0.32583714 0 hPsi_site_11705 iPseU_CNN:0.32583714;iRNA_PseU:0 11706 chr1 24996026 24996026 1 + A G LIHC 24996025 + 24996005 24996045 41 AGGCAGTCCCCGTCTCCAAGTACTAGGCCCATTAGGAGAGT AGGCAGTCCCCGTCTCCAAGTGCTAGGCCCATTAGGAGAGT < 41bp 0.813879630480527 0.388268656286217 0.40463978 0.2156215 prediction 0.627759260961055 Functional Loss - SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996025 chr1:24996026 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6289 0 0 1 0 0 Cytosol 0.438718746928275 0.438718610671915 0 0 hPsi_site_11706 iPseU_CNN:0;iRNA_PseU:0 11707 chr10 91162349 91162349 1 + A G COAD 91162348 + 91162328 91162368 41 GCAACTTTGCCTGGATGTATTACCACATGGGCAGACTGGCA GCAACTTTGCCTGGATGTATTGCCACATGGGCAGACTGGCA < 41bp 0.813848380347568 0.402590815613502 0.59059304 0.30262744 prediction 0.627696760695135 Functional Loss - IFIT1 ENSG00000185745 CDS Human protein_coding chr10:91162348 chr10:91162349 nonsynonymous SNV 0.937 4 22 hPsi_associated_SNPs_6290 0 0 0 0 0 Cytosol 0.438717086087039 0.438714540243546 0.18118608 0 hPsi_site_11707 iPseU_CNN:0.18118608;iRNA_PseU:0 11708 chr13 44455474 44455474 1 + T G BLCA 44455473 + 44455453 44455493 41 GGAAGACATTAATGAAAGCTTTTATTGATCAACTCTTCACT GGAAGACATTAATGAAAGCTTGTATTGATCAACTCTTCACT < 41bp 0.813844579374635 0.492956792584171 0.38588303 0.28989348 prediction 0.62768915874927 Functional Loss - LACC1 ENSG00000179630 CDS Human protein_coding chr13:44455473 chr13:44455474 nonsynonymous SNV 0.945 3 22 hPsi_associated_SNPs_6291 0 0 0 0 0 exosome 0.438577945711639 0.438715842062159 0 0 hPsi_site_11708 iPseU_CNN:0;iRNA_PseU:0 11709 chr1 24021204 24021204 1 + T G KIRP 24021203 + 24021183 24021223 41 TCAGATACTGGAAACTTTGGTTTTGGGATCCAGGAACACAT TCAGATACTGGAAACTTTGGTGTTGGGATCCAGGAACACAT < 41bp 0.813842869553534 0.478883283401976 0.3007962 0.2657286 prediction 0.627685739107069 Functional Loss - RPL11 ENSG00000142676 CDS Human protein_coding chr1:24021203 chr1:24021204 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6292 0 0 1 0 2 Cytosol 0.438693799807249 0.438697666895133 0 0 hPsi_site_11709 iPseU_CNN:0;iRNA_PseU:0 11710 chr1 167082984 167082984 1 + T G UCEC 167082983 + 167082963 167083003 41 GATGCAGAAACAGAAAGCATTTTCATGGAACCCATTCACCT GATGCAGAAACAGAAAGCATTGTCATGGAACCCATTCACCT < 41bp 0.837317447694687 0.523493189597829 0.83207226 0.61342746 prediction 0.627648516193717 Functional Loss - DUSP27 ENSG00000198842 CDS Human protein_coding chr1:167082983 chr1:167082984 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6293 0 0 0 0 2 Endoplasmic reticulum 0.439299677950862 0.428937730766957 0.4372896 0 hPsi_site_11710 iPseU_CNN:0.4372896;iRNA_PseU:0 11711 chr3 196613072 196613072 1 + A C rs34251880 196613071 + 196613051 196613091 41 CTTGGGCAAGGAGCTTAGTTTAGACGAAGCATTCCCTGACC CTTGGGCAAGGAGCTTAGTTTCGACGAAGCATTCCCTGACC < 41bp 0.813776896748052 0.44388782155912 0.77527237 0.48050442 prediction 0.627553793496104 Functional Loss - SENP5 ENSG00000119231 CDS Human protein_coding chr3:196613071 chr3:196613072 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_6294 0 0 0 0 0 Cytosol 0.438712220898766 0.438707888984183 0.55054474 0 hPsi_site_11711 iPseU_CNN:0.55054474;iRNA_PseU:0 11712 chr19 2917491 2917491 1 + A G COAD 2917490 + 2917470 2917510 41 ACTGTGGGAAAGCCTTCACTTACCCCCAGGCTTTTCAAAGA ACTGTGGGAAAGCCTTCACTTGCCCCCAGGCTTTTCAAAGA < 41bp 0.90584302977584 0.592067808645084 0.59124184 0.2879287 prediction 0.627550442261512 Functional Loss - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917490 chr19:2917491 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6295 0 0 1 0 0 nucleoplasm 0.438716014995589 0.438718730732815 0.18248368 0 hPsi_site_11712 iPseU_CNN:0.18248368;iRNA_PseU:0 11713 chr3 160150895 160150895 1 + A G SKCM 160150894 + 160150874 160150914 41 ACTTAGTTCATTGGCTTTAGTATTTGCTCTTCACCACTACA ACTTAGTTCATTGGCTTTAGTGTTTGCTCTTCACCACTACA < 41bp 0.813765731894089 0.40892719717358 0.3089429 0.26216257 prediction 0.627531463788178 Functional Loss - SMC4 ENSG00000113810 CDS Human protein_coding chr3:160150894 chr3:160150895 synonymous SNV . 0 22 hPsi_associated_SNPs_6296 0 0 1 0 0 Nucleus 0.438717911088089 0.438709367381149 0 0 hPsi_site_11713 iPseU_CNN:0;iRNA_PseU:0 11714 chr17 75205464 75205464 1 + A G STAD 75205463 + 75205443 75205483 41 GACTGGTCCCCAAATCTCTGTACCGGACTGCAGAGGAGCTG GACTGGTCCCCAAATCTCTGTGCCGGACTGCAGAGGAGCTG < 41bp 0.813734227544051 0.378380768543419 0.63557196 0.26813608 prediction 0.627468455088101 Functional Loss - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75205463 chr17:75205464 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6297 0 0 1 0 3 Cytosol 0.443942081130971 0.43713209657029 0.27114392 0 hPsi_site_11714 iPseU_CNN:0.27114392;iRNA_PseU:0 11715 chr14 20586427 20586427 1 + A G UCEC 20586426 + 20586406 20586446 41 TTCTTTGGCCCATGCATCTTTATCTACATTTGGCCCTTCGG TTCTTTGGCCCATGCATCTTTGTCTACATTTGGCCCTTCGG < 41bp 0.887617755264868 0.573893281818637 0.42214388 0.30658782 prediction 0.627448946892464 Functional Loss - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586426 chr14:20586427 nonsynonymous SNV 0.211 0 22 hPsi_associated_SNPs_6298 0 0 0 0 0 unknown 0.438709568497618 0.438671739867575 0 0 hPsi_site_11715 iPseU_CNN:0;iRNA_PseU:0 11716 chr11 126146393 126146393 1 + A G KIRP 126146392 + 126146372 126146412 41 GGGAAGGATTAGGTAGCAACTACCTAGGTGGTCGTAGCCCC GGGAAGGATTAGGTAGCAACTGCCTAGGTGGTCGTAGCCCC < 41bp 0.81371791010883 0.39315010258455 0.7860702 0.55149645 prediction 0.62743582021766 Functional Loss - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126146392 chr11:126146393 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_6299 0 0 1 2 1 Ribosome 0.438719193410481 0.438719724081619 0.4691475 0 hPsi_site_11716 iPseU_CNN:0.4691475;iRNA_PseU:0 11717 chr1 155059914 155059914 1 + A G rs139174640 155059913 + 155059893 155059933 41 GGACCTTGCCCTGCTCACCCTATGTGGTCCCACCTATCCTC GGACCTTGCCCTGCTCACCCTGTGTGGTCCCACCTATCCTC < 41bp 0.864749009884707 0.551042106064033 0.37403736 0.3203746 prediction 0.627413807641348 Functional Loss - EFNA3 ENSG00000143590 UTR3 Human protein_coding chr1:155059913 chr1:155059914 . . 0 22 hPsi_associated_SNPs_6300 0 0 1 0 0 chromatin 0.43868082676227 0.438671058495632 0 0 hPsi_site_11717 iPseU_CNN:0;iRNA_PseU:0 11718 chr11 55110944 55110944 1 + A G HNSC 55110943 + 55110923 55110963 41 TTACTCTGTGATAAAATCGCTATTTCCTTGTCAGCTTGCAT TTACTCTGTGATAAAATCGCTGTTTCCTTGTCAGCTTGCAT < 41bp 0.81370659612403 0.425702275909305 0.45484665 0.38611582 prediction 0.62741319224806 Functional Loss - OR4A16 ENSG00000181961 CDS Human protein_coding chr11:55110943 chr11:55110944 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_6301 0 0 0 0 0 unknown 0.438738952227126 0.438724943006974 0 0 hPsi_site_11718 iPseU_CNN:0;iRNA_PseU:0 11719 chr12 129442113 129442113 1 + A G STAD 129442112 + 129442092 129442132 41 AATGGATTTAGAAGTACCGGTATTGGCCAGGAACATCCCCG AATGGATTTAGAAGTACCGGTGTTGGCCAGGAACATCCCCG < 41bp 0.813693563148644 0.385444162760704 0.43051517 0.25149596 prediction 0.627387126297289 Functional Loss - GLT1D1 ENSG00000151948 CDS Human protein_coding chr12:129442112 chr12:129442113 synonymous SNV . 0 22 hPsi_associated_SNPs_6302 0 0 0 0 2 Cytosol 0.438718799698874 0.438718602065727 0 0 hPsi_site_11719 iPseU_CNN:0;iRNA_PseU:0 11720 chr14 100748844 100748844 1 + A C rs9291 100748843 + 100748823 100748863 41 CAACAGGTGGTGAGAAAAATTATGTTTTTATTCGCTTTCTG CAACAGGTGGTGAGAAAAATTCTGTTTTTATTCGCTTTCTG < 41bp 0.839190837856992 0.525509660769764 0.3236814 0.2608537 prediction 0.627362354174456 Functional Loss - YY1;SLC25A29 ENSG00000259052 ncRNA_intronic Human sense_overlapping chr14:100748843 chr14:100748844 . . 0 22 hPsi_associated_SNPs_6303 0 1 1 0 0 unknown 0.437561820485667 0.439187354886147 0 0 hPsi_site_11720 iPseU_CNN:0;iRNA_PseU:0 11721 chr1 152785004 152785004 1 + A C UCEC 152785003 + 152784983 152785023 41 CCTCCCAAGTGCCTCACCCCTAGATGCCCCCCAAAGTGTCC CCTCCCAAGTGCCTCACCCCTCGATGCCCCCCAAAGTGTCC < 41bp 0.86918229628965 0.555505651114471 0.2790389 0.23396182 prediction 0.627353290350356 Functional Loss - LCE1B ENSG00000196734 CDS Human protein_coding chr1:152785003 chr1:152785004 synonymous SNV . 0 22 hPsi_associated_SNPs_6304 0 0 0 0 0 unknown 0.438718564122641 0.438718579880821 0 0 hPsi_site_11721 iPseU_CNN:0;iRNA_PseU:0 11722 chr6 89790548 89790548 1 + A G rs114364131 89790547 + 89790527 89790567 41 AGCATCCATCGCCGCCACCCTATCTTCACTGGCTTCATTCA AGCATCCATCGCCGCCACCCTGTCTTCACTGGCTTCATTCA < 41bp 0.81367583794305 0.45419257709336 0.56253266 0.30252427 prediction 0.627351675886099 Functional Loss - PNRC1 ENSG00000146278 UTR5 Human protein_coding chr6:89790547 chr6:89790548 . . 0 22 hPsi_associated_SNPs_6305 0 0 1 0 0 Cytosol 0.438718142980676 0.438714963994062 0.12506532 0 hPsi_site_11722 iPseU_CNN:0.12506532;iRNA_PseU:0 11723 chr19 11728097 11728097 1 + T G UCEC 11728096 + 11728076 11728116 41 GCAAGCAGTGTGGGAAAGCTTTCAGTTGTTCCAAGTACATT GCAAGCAGTGTGGGAAAGCTTGCAGTTGTTCCAAGTACATT < 41bp 0.82489888061892 0.511226220082004 0.6639651 0.46289432 prediction 0.627345321073832 Functional Loss - ZNF627 ENSG00000198551 CDS Human protein_coding chr19:11728096 chr19:11728097 nonsynonymous SNV 0.956 3 22 hPsi_associated_SNPs_6306 0 0 0 0 0 Cytosol 0.438718904659311 0.438739294894371 0.3279302 0 hPsi_site_11723 iPseU_CNN:0.3279302;iRNA_PseU:0 11724 chr11 33047208 33047208 1 + T G UCEC 33047207 + 33047187 33047227 41 TGATTTTTCTCCTTCTAGGTTTCAGTGTAGCTCAGAAGCCA TGATTTTTCTCCTTCTAGGTTGCAGTGTAGCTCAGAAGCCA < 41bp 0.825248365232112 0.511589000176181 0.54098105 0.3197709 prediction 0.627318730111862 Functional Loss - DEPDC7 ENSG00000121690 CDS Human protein_coding chr11:33047207 chr11:33047208 nonsynonymous SNV 0.931 3 22 hPsi_associated_SNPs_6307 0 0 0 0 1 Cytosol 0.43871851534976 0.438718631233989 0.0819620999999999 0 hPsi_site_11724 iPseU_CNN:0.0819620999999999;iRNA_PseU:0 11725 chr12 31231419 31231419 1 + A G UCEC 31231418 + 31231398 31231438 41 AAGACTTCATGGCAGAGCTGTACCGGGTTTTGGAGGCTGGC AAGACTTCATGGCAGAGCTGTGCCGGGTTTTGGAGGCTGGC < 41bp 0.813653692363976 0.403332893281883 0.7854129 0.2136155 prediction 0.627307384727952 Functional Loss - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31231418 chr12:31231419 nonsynonymous SNV 0.218 4 22 hPsi_associated_SNPs_6308 0 0 0 0 3 Cytosol 0.439251375440882 0.43864718963434 0.5708258 0 hPsi_site_11725 iPseU_CNN:0.5708258;iRNA_PseU:0 11726 chr2 48602520 48602520 1 + A G SKCM 48602519 + 48602499 48602539 41 CTCCACCTTGCTGGAATTCGTACATGTTTAGGTTCCCTAAT CTCCACCTTGCTGGAATTCGTGCATGTTTAGGTTCCCTAAT < 41bp 0.813637660822857 0.418152744484784 0.27256757 0.1991123 prediction 0.627275321645713 Functional Loss - FOXN2 ENSG00000170802 CDS Human protein_coding chr2:48602519 chr2:48602520 nonsynonymous SNV 0.954 2 22 hPsi_associated_SNPs_6309 0 0 1 0 0 Cytosol 0.438718599115776 0.43871859323011 0 0 hPsi_site_11726 iPseU_CNN:0;iRNA_PseU:0 11727 chr22 31667137 31667137 1 + A G LUSC 31667136 + 31667116 31667156 41 TTCCAGGCCTATTTGCACTCTATGTGCATCATCCACCGGGA TTCCAGGCCTATTTGCACTCTGTGTGCATCATCCACCGGGA < 41bp 0.914335787169178 0.600711555757469 0.46900013 0.40328392 prediction 0.627248462823419 Functional Loss - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31667136 chr22:31667137 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6310 0 0 1 0 2 Cytosol 0.438718443966027 0.438719719798248 0 0 hPsi_site_11727 iPseU_CNN:0;iRNA_PseU:0 11728 chrX 144904457 144904457 1 + T G UCEC 144904456 + 144904436 144904476 41 CTGAATGACAACCTTCTGCTTTCACTGCCCAGCAATGTGTT CTGAATGACAACCTTCTGCTTGCACTGCCCAGCAATGTGTT < 41bp 0.821346676365345 0.50773473979743 0.33019382 0.2647013 prediction 0.62722387313583 Functional Loss - SLITRK2 ENSG00000185985 CDS Human protein_coding chrX:144904456 chrX:144904457 nonsynonymous SNV 0.981 0 22 hPsi_associated_SNPs_6311 0 0 0 0 0 Cytosol 0.436042427830678 0.438638615231344 0 0 hPsi_site_11728 iPseU_CNN:0;iRNA_PseU:0 11729 chr8 19677966 19677966 1 + A G LUSC 19677965 + 19677945 19677985 41 GGAACAATGCTTCAACACGTTAGAACGATCAGAAATGTTGC GGAACAATGCTTCAACACGTTGGAACGATCAGAAATGTTGC < 41bp 0.908324543576243 0.594732229150478 0.7886244 0.42142463 prediction 0.627184628851529 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677965 chr8:19677966 synonymous SNV . 0 22 hPsi_associated_SNPs_6312 0 0 1 0 2 Cytosol 0.427666628568343 0.438718714787425 0.5772488 0 hPsi_site_11729 iPseU_CNN:0.5772488;iRNA_PseU:0 11730 chr3 101284161 101284161 1 + T G UCEC 101284160 + 101284140 101284180 41 ATAAACAGAAAAACTTTCTATTTTTACGACTTTGGGATAGG ATAAACAGAAAAACTTTCTATGTTTACGACTTTGGGATAGG < 41bp 0.823052939541042 0.509471743365767 0.34479532 0.2399984 prediction 0.62716239235055 Functional Loss - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101284160 chr3:101284161 nonsynonymous SNV 0.936 3 22 hPsi_associated_SNPs_6313 0 0 1 0 0 Ribosome 0.438712947212789 0.438717333326588 0 0 hPsi_site_11730 iPseU_CNN:0;iRNA_PseU:0 11731 chr11 67174428 67174428 1 + T G LUSC 67174427 + 67174407 67174447 41 CCGAGTGGTTCCTGTGCCTCTTCGCCCGCTCCCTGCCCTTC CCGAGTGGTTCCTGTGCCTCTGCGCCCGCTCCCTGCCCTTC < 41bp 0.825937685733092 0.512369138101002 0.3011002 0.22643453 prediction 0.62713709526418 Functional Loss - TBC1D10C ENSG00000175463 CDS Human protein_coding chr11:67174427 chr11:67174428 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6314 0 0 0 0 0 nucleus 0.438718593763512 0.43871859299218 0 0 hPsi_site_11731 iPseU_CNN:0;iRNA_PseU:0 11732 chr3 52831234 52831234 1 + A G PAAD 52831233 + 52831213 52831253 41 TGAAGAGGCACAAGGGCAAGTACGAGATGTACCTCAAGGTC TGAAGAGGCACAAGGGCAAGTGCGAGATGTACCTCAAGGTC < 41bp 0.813554454486774 0.388626797798119 0.70992804 0.21441457 prediction 0.627108908973548 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52831233 chr3:52831234 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6315 0 0 1 0 1 cytosol 0.438718453234299 0.438714501447098 0.41985608 0 hPsi_site_11732 iPseU_CNN:0.41985608;iRNA_PseU:0 11733 chr9 102606989 102606989 1 + A G COAD 102606988 + 102606968 102607008 41 CTGAGCATGTGCAACAATTCTACAACCTCCTGACAGCCTCC CTGAGCATGTGCAACAATTCTGCAACCTCCTGACAGCCTCC < 41bp 0.813537336087172 0.387638574689849 0.64552295 0.3358664 prediction 0.627074672174344 Functional Loss - NR4A3 ENSG00000119508 CDS Human protein_coding chr9:102606988 chr9:102606989 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6316 0 0 1 0 1 Cytosol 0.438842203025153 0.444889872146593 0.2910459 0 hPsi_site_11733 iPseU_CNN:0.2910459;iRNA_PseU:0 11734 chr15 101170137 101170137 1 + A G UCEC 101170136 + 101170116 101170156 41 GTGCACGGATGTTATATAATTACGGAGCAGACACGAACACA GTGCACGGATGTTATATAATTGCGGAGCAGACACGAACACA < 41bp 0.813514953121618 0.416550667134977 0.553458 0.2765958 prediction 0.627029906243237 Functional Loss - ASB7 ENSG00000183475 CDS Human protein_coding chr15:101170136 chr15:101170137 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_6317 0 0 1 0 0 Ribosome 0.438569732848616 0.438705694216489 0.106916 0 hPsi_site_11734 iPseU_CNN:0.106916;iRNA_PseU:0 11735 chr11 57798648 57798648 1 + A C UCEC 57798647 + 57798627 57798667 41 TGTCCTGCCTTGAAATCTGGTACACTTCTGTTACAGTGCCC TGTCCTGCCTTGAAATCTGGTCCACTTCTGTTACAGTGCCC < 41bp 0.813497034716956 0.457213925816308 0.64708734 0.2617886 prediction 0.626994069433912 Functional Loss - OR6Q1 ENSG00000172381 CDS Human other chr11:57798647 chr11:57798648 nonsynonymous SNV 0.746 2 22 hPsi_associated_SNPs_6318 0 0 0 0 0 unknown 0.438718595110677 0.438718587237591 0.29417468 0 hPsi_site_11735 iPseU_CNN:0.29417468;iRNA_PseU:0 11736 chr5 121786991 121786991 1 + A G UCEC 121786990 + 121786970 121787010 41 CAGAACTTAAAACTGAGAGTTACCTTTGAGGAGCCTGTGGT CAGAACTTAAAACTGAGAGTTGCCTTTGAGGAGCCTGTGGT < 41bp 0.813484665027697 0.420908023519153 0.4775345 0.23860064 prediction 0.626969330055393 Functional Loss - SNCAIP ENSG00000064692 CDS Human protein_coding chr5:121786990 chr5:121786991 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_6319 0 0 0 0 0 exosome 0.438718707879987 0.438721198538325 0 0 hPsi_site_11736 iPseU_CNN:0;iRNA_PseU:0 11737 chr7 29552299 29552299 1 + A G STAD 29552298 + 29552278 29552318 41 CCACCCTGCATGATATGCGGTACCAAAAGCTGATTGTGCAG CCACCCTGCATGATATGCGGTGCCAAAAGCTGATTGTGCAG < 41bp 0.81347920709838 0.453285607756371 0.8938318 0.36605304 prediction 0.62695841419676 Functional Loss - CHN2 ENSG00000106069 CDS Human protein_coding chr7:29552298 chr7:29552299 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6320 0 0 0 1 0 Nucleus 0.438731578268224 0.438718731939227 0.7876636 0 hPsi_site_11737 iPseU_CNN:0.7876636;iRNA_PseU:0 11738 chr14 59961802 59961802 1 + A G UCEC 59961801 + 59961781 59961821 41 CATGGCAGCTATTATCACCTTACTTGTGAGTGATCCAGTTG CATGGCAGCTATTATCACCTTGCTTGTGAGTGATCCAGTTG < 41bp 0.813478962762559 0.39848969140218 0.61922365 0.17687026 prediction 0.626957925525118 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59961801 chr14:59961802 synonymous SNV . 0 22 hPsi_associated_SNPs_6321 0 0 1 0 1 Ribosome 0.440844434667143 0.438481993293204 0.2384473 0 hPsi_site_11738 iPseU_CNN:0.2384473;iRNA_PseU:0 11739 chr11 55419018 55419018 1 + A G UCEC 55419017 + 55418997 55419037 41 GGGGAGTTTTGTTATCTTGCTAATCTCCTACAGCATCATCC GGGGAGTTTTGTTATCTTGCTGATCTCCTACAGCATCATCC < 41bp 0.889423072276879 0.575948020283774 0.7513261 0.3228009 prediction 0.626950103986212 Functional Loss - OR4S2 ENSG00000174982 CDS Human protein_coding chr11:55419017 chr11:55419018 synonymous SNV . 0 22 hPsi_associated_SNPs_6322 0 0 0 0 0 unknown 0.438718642355001 0.438718093163712 0.5026522 0 hPsi_site_11739 iPseU_CNN:0.5026522;iRNA_PseU:0 11740 chr6 36168830 36168830 1 + A G OV 36168829 + 36168809 36168849 41 TGGCTGTACACCAGGAGTGCTATGGCGTCCCATACATCCCT TGGCTGTACACCAGGAGTGCTGTGGCGTCCCATACATCCCT < 41bp 0.81346899931302 0.388858374717261 0.27305055 0.22214544 prediction 0.626937998626041 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36168829 chr6:36168830 nonsynonymous SNV 0.949 5 22 hPsi_associated_SNPs_6323 0 0 1 0 0 chromatin 0.438737282604456 0.438719490589157 0 0 hPsi_site_11740 iPseU_CNN:0;iRNA_PseU:0 11741 chr1 180905344 180905344 1 + A G rs144874037 180905343 + 180905323 180905363 41 CCAGGAGGCCAGGCCCAGGTTACAGAAAGCCACGAGTCCCT CCAGGAGGCCAGGCCCAGGTTGCAGAAAGCCACGAGTCCCT < 41bp 0.813453752793089 0.392658378031343 0.65985835 0.40385634 prediction 0.626907505586178 Functional Loss - KIAA1614 ENSG00000135835 CDS Human protein_coding chr1:180905343 chr1:180905344 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6324 0 0 0 0 0 nucleus 0.438718592968051 0.438718592992412 0.3197167 0 hPsi_site_11741 iPseU_CNN:0.3197167;iRNA_PseU:0 11742 chr8 22145119 22145119 1 + T G UCEC 22145118 + 22145098 22145138 41 CACCGGCAACGTCACTGCGTTTGATGGATCTATTCTCTATC CACCGGCAACGTCACTGCGTTGGATGGATCTATTCTCTATC < 41bp 0.850246407805138 0.536804212452507 0.70515573 0.686754 prediction 0.626884390705262 Functional Loss - PIWIL2 ENSG00000197181 CDS Human protein_coding chr8:22145118 chr8:22145119 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6325 0 0 0 0 2 nucleus 0.438728738603828 0.438759988113063 0.03680346 0 hPsi_site_11742 iPseU_CNN:0.03680346;iRNA_PseU:0 11743 chr10 7866494 7866494 1 + A G UCEC 7866493 + 7866473 7866513 41 GAAAAGAATACATTCCTGATTACCTGCCACCCATTGTGTCT GAAAAGAATACATTCCTGATTGCCTGCCACCCATTGTGTCT < 41bp 0.901804149247043 0.588367741164894 0.41354486 0.17949167 prediction 0.626872816164297 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:7866493 chr10:7866494 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6326 0 0 1 0 1 Cytosol 0.438584003088725 0.438793754553185 0 0 hPsi_site_11743 iPseU_CNN:0;iRNA_PseU:0 11744 chr10 127434389 127434389 1 + T G LUSC 127434388 + 127434368 127434408 41 GATGCCACCAATGCCGCCCTTTTATTATGTAACACGGGAAG GATGCCACCAATGCCGCCCTTGTATTATGTAACACGGGAAG < 41bp 0.843323883590909 0.529890181362614 0.35593933 0.20013309 prediction 0.62686740445659 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127434388 chr10:127434389 nonsynonymous SNV 0.739 4 22 hPsi_associated_SNPs_6327 0 0 1 0 0 Cytosol 0.438719223428972 0.438714561550895 0 0 hPsi_site_11744 iPseU_CNN:0;iRNA_PseU:0 11745 chr20 11903914 11903914 1 + A G UCEC 11903913 + 11903893 11903933 41 ATCGAAGCAACCAATGGCGCTATCGTGGTCGCTGTGACAGC ATCGAAGCAACCAATGGCGCTGTCGTGGTCGCTGTGACAGC < 41bp 0.905304513355928 0.59187106892425 0.42349207 0.22604585 prediction 0.626866888863358 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903913 chr20:11903914 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6328 0 0 1 0 0 Cytosol 0.440661564709954 0.438787526719969 0 0 hPsi_site_11745 iPseU_CNN:0;iRNA_PseU:0 11746 chr2 198570761 198570761 1 + A G COAD 198570760 + 198570740 198570780 41 CCTGGACCAAGGAAGAAAACTACATTTTCAGGCTTTCCCAG CCTGGACCAAGGAAGAAAACTGCATTTTCAGGCTTTCCCAG < 41bp 0.813411179164406 0.409879667119818 0.2755993 0.268461 prediction 0.626822358328812 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570760 chr2:198570761 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6329 0 0 1 0 0 Ribosome 0.438718157509712 0.438718593265916 0 0 hPsi_site_11746 iPseU_CNN:0;iRNA_PseU:0 11747 chr1 200143295 200143295 1 + A G LUSC 200143294 + 200143274 200143314 41 ACCTGAACGGGGATGTGCCCTATAATAACCTTCTCATTGAA ACCTGAACGGGGATGTGCCCTGTAATAACCTTCTCATTGAA < 41bp 0.813405719367724 0.41719953460566 0.2909642 0.21262681 prediction 0.626811438735448 Functional Loss - NR5A2 ENSG00000116833 CDS Human protein_coding chr1:200143294 chr1:200143295 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6330 0 0 0 0 0 cytosol 0.439210340146864 0.438737761767569 0 0 hPsi_site_11747 iPseU_CNN:0;iRNA_PseU:0 11748 chr1 229434782 229434782 1 + A G COAD 229434781 + 229434761 229434801 41 GAATGTAGAAGAGGCTTTTGTACAGTGTGCAAGAAAAATAC GAATGTAGAAGAGGCTTTTGTGCAGTGTGCAAGAAAAATAC < 41bp 0.813405578967177 0.395257510459865 0.5104902 0.32870358 prediction 0.626811157934355 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229434781 chr1:229434782 synonymous SNV . 0 22 hPsi_associated_SNPs_6331 0 0 1 10 2 Ribosome 0.438718490639188 0.438718620786605 0.0209804 0 hPsi_site_11748 iPseU_CNN:0.0209804;iRNA_PseU:0 11749 chr19 41712568 41712568 1 + A C rs200261766 41712567 + 41712547 41712587 41 GCTCACTTGACTCATGCTGCTAAGATGCACAACCGCACACC GCTCACTTGACTCATGCTGCTCAGATGCACAACCGCACACC < 41bp 0.848014745592213 0.534614550806486 0.31723803 0.1852938 prediction 0.626800389571454 Functional Loss - CYP2S1 ENSG00000167600 UTR3 Human protein_coding chr19:41712567 chr19:41712568 . . 0 22 hPsi_associated_SNPs_6332 0 0 0 6 0 Ribosome 0.439881048973648 0.450406675869565 0 0 hPsi_site_11749 iPseU_CNN:0;iRNA_PseU:0 11750 chr5 172461615 172461615 1 + A G rs11934 172461614 + 172461594 172461634 41 TGCCGACTCCACAAAACGATTATGTACTCTTCTGAGATAGA TGCCGACTCCACAAAACGATTGTGTACTCTTCTGAGATAGA < 41bp 0.876846902124683 0.563460834785704 0.21691296 0.15510163 prediction 0.626772134677957 Functional Loss - ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461614 chr5:172461615 . . 0 22 hPsi_associated_SNPs_6333 0 0 1 0 0 Ribosome 0.438718566402191 0.438718995395098 0 0 hPsi_site_11750 iPseU_CNN:0;iRNA_PseU:0 11751 chr4 4864494 4864494 1 + T G OV 4864493 + 4864473 4864513 41 ACCGTAAGCCGCGGACGCCCTTCACCACCGCGCAGCTGCTG ACCGTAAGCCGCGGACGCCCTGCACCACCGCGCAGCTGCTG < 41bp 0.81337907857979 0.477506786267764 0.29047763 0.19801158 prediction 0.62675815715958 Functional Loss - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864493 chr4:4864494 nonsynonymous SNV 0.918 5 22 hPsi_associated_SNPs_6334 0 0 0 0 1 Cytosol 0.438887163736707 0.438696058648197 0 0 hPsi_site_11751 iPseU_CNN:0;iRNA_PseU:0 11752 chr19 2917774 2917774 1 + T G UCEC 2917773 + 2917753 2917793 41 GTTTAGAGAACATGTGAGAATTCACACGCAAGAGCAGCTCT GTTTAGAGAACATGTGAGAATGCACACGCAAGAGCAGCTCT < 41bp 0.813371814510758 0.496916711961985 0.3458677 0.27655882 prediction 0.626743629021516 Functional Loss - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917773 chr19:2917774 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_6335 0 0 0 0 0 nucleoplasm 0.436731975828683 0.427345130756221 0 0 hPsi_site_11752 iPseU_CNN:0;iRNA_PseU:0 11753 chr14 76156612 76156612 1 + T G SKCM 76156611 + 76156591 76156631 41 ATACACATGGATTCAAGGCTTTTCACATCCTCCCCCAGACC ATACACATGGATTCAAGGCTTGTCACATCCTCCCCCAGACC < 41bp 0.836757460670006 0.523397716125975 0.7068612 0.46918643 prediction 0.626719489088062 Functional Loss - TTLL5 ENSG00000119685 CDS Human protein_coding chr14:76156611 chr14:76156612 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_6336 0 0 1 0 2 Cytosol 0.438718593049357 0.438720350046572 0.4137224 0 hPsi_site_11753 iPseU_CNN:0.4137224;iRNA_PseU:0 11754 chrX 153780224 153780224 1 + A C rs57174646 153780223 + 153780203 153780243 41 CCCTTGCCCTGTTGGATGAATAGGCACCTCTGGAAGAGCCA CCCTTGCCCTGTTGGATGAATCGGCACCTCTGGAAGAGCCA < 41bp 0.813337994736422 0.447666694404683 0.5084194 0.36226016 prediction 0.626675989472844 Functional Loss - IKBKG ENSG00000073009;ENSG00000073009 exonic;splicing Human other chrX:153780223 chrX:153780224 synonymous SNV . 0 22 hPsi_associated_SNPs_6337 0 0 1 0 0 chromatin 0.438843053916395 0.438718365395703 0.0168387999999999 0 hPsi_site_11754 iPseU_CNN:0.0168387999999999;iRNA_PseU:0 11755 chr6 34213379 34213379 1 + A G COAD 34213378 + 34213358 34213398 41 CCCTCCGCCTGGGATCTGAGTACATATTGTGGTGATGGAGA CCCTCCGCCTGGGATCTGAGTGCATATTGTGGTGATGGAGA < 41bp 0.875139834858934 0.561812189416155 0.18337771 0.13771549 prediction 0.626655290885558 Functional Loss - HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34213378 chr6:34213379 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_6338 0 0 1 2 0 Cytosol 0.438853737487318 0.438883878562666 0 0 hPsi_site_11755 iPseU_CNN:0;iRNA_PseU:0 11756 chr21 38853019 38853019 1 + A G SKCM 38853018 + 38852998 38853038 41 ATAAGAAGGAACGGAAGGTTTACAATGATGGTTATGATGAT ATAAGAAGGAACGGAAGGTTTGCAATGATGGTTATGATGAT < 41bp 0.813314376854016 0.404081227259205 0.56950885 0.3479278 prediction 0.626628753708032 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38853018 chr21:38853019 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6339 0 0 1 0 1 Cytosol 0.438718592995101 0.438718592995086 0.1390177 0 hPsi_site_11756 iPseU_CNN:0.1390177;iRNA_PseU:0 11757 chr4 188924832 188924832 1 + A G SKCM 188924831 + 188924811 188924851 41 AGGAGGTTTATTCAGTCAAATAACCTGAAAGCCCACATCCT AGGAGGTTTATTCAGTCAAATGACCTGAAAGCCCACATCCT < 41bp 0.813303180099375 0.402741110446363 0.40875044 0.21458328 prediction 0.626606360198749 Functional Loss - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924831 chr4:188924832 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_6340 0 0 0 0 0 Nucleus 0.438718549581146 0.438692890444138 0 0 hPsi_site_11757 iPseU_CNN:0;iRNA_PseU:0 11758 chr2 99204018 99204018 1 + T G UCEC 99204017 + 99203997 99204037 41 AATTCCCTGCAGCTGAAGGCTTTCCCCAAGCATTACAGGCC AATTCCCTGCAGCTGAAGGCTGTCCCCAAGCATTACAGGCC < 41bp 0.839818609431803 0.526581872457138 0.5014149 0.28459448 prediction 0.626473473949331 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99204017 chr2:99204018 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6341 0 0 0 0 1 Ribosome 0.438718579257765 0.438718593254888 0.00282979999999999 0 hPsi_site_11758 iPseU_CNN:0.00282979999999999;iRNA_PseU:0 11759 chr1 66102622 66102622 1 + A G UCEC 66102621 + 66102601 66102641 41 GTAAGAAGACTTTTGCATCTTACATGCCTCAATTCCAAACT GTAAGAAGACTTTTGCATCTTGCATGCCTCAATTCCAAACT < 41bp 0.813224691900717 0.457481936922056 0.7109534 0.361876 prediction 0.626449383801433 Functional Loss - LEPR ENSG00000116678 CDS Human protein_coding chr1:66102621 chr1:66102622 nonsynonymous SNV 0.856 4 22 hPsi_associated_SNPs_6342 0 0 0 0 0 chromatin 0.438712027261963 0.438719205523502 0.4219068 0 hPsi_site_11759 iPseU_CNN:0.4219068;iRNA_PseU:0 11760 chr3 10188300 10188300 1 + T G KIRC 10188299 + 10188279 10188319 41 ATGTTGACGGACAGCCTATTTTTGCCAATATCACACTGCCA ATGTTGACGGACAGCCTATTTGTGCCAATATCACACTGCCA < 41bp 0.813223030730053 0.48843853466174 0.27175567 0.33509976 prediction 0.626446061460107 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10188299 chr3:10188300 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6343 0 0 1 0 1 Ribosome 0.439289543341249 0.438444130617342 0 0 hPsi_site_11760 iPseU_CNN:0;iRNA_PseU:0 11761 chr19 39912806 39912806 1 + T G HNSC 39912805 + 39912785 39912825 41 CCAGAATCTCAGCCACCAGTTTCAGGCTCTGCACCCCCTGA CCAGAATCTCAGCCACCAGTTGCAGGCTCTGCACCCCCTGA < 41bp 0.845225953909456 0.532017275760624 0.9359144 0.67775303 prediction 0.626417356297665 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39912805 chr19:39912806 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_6344 0 0 1 0 1 Nucleus 0.438718595875175 0.43877990326826 0.51632274 0 hPsi_site_11761 iPseU_CNN:0.51632274;iRNA_PseU:0 11762 chr11 94801365 94801365 1 + A G rs148509938 94801364 + 94801344 94801384 41 AAGGTTGTGTCACACTTTTCTACCTTTTTGCCAGTTTGAAG AAGGTTGTGTCACACTTTTCTGCCTTTTTGCCAGTTTGAAG < 41bp 0.81319082033818 0.420633075597835 0.270252 0.216486 prediction 0.626381640676361 Functional Loss - SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94801364 chr11:94801365 . . 0 22 hPsi_associated_SNPs_6345 0 0 1 0 0 Cytosol 0.437739362768348 0.439226837281779 0 0 hPsi_site_11762 iPseU_CNN:0;iRNA_PseU:0 11763 chr2 99995539 99995539 1 + A G LUSC 99995538 + 99995518 99995558 41 GAAAAGCTAAGAGCCCCTATTATCTGCGTACTTGGGCATGT GAAAAGCTAAGAGCCCCTATTGTCTGCGTACTTGGGCATGT < 41bp 0.901114541094824 0.587936012235921 0.40085003 0.32061064 prediction 0.626357057717806 Functional Loss - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99995538 chr2:99995539 nonsynonymous SNV 0.958 0 22 hPsi_associated_SNPs_6346 0 0 1 0 2 Ribosome 0.438718556357002 0.43871858142972 0 0 hPsi_site_11763 iPseU_CNN:0;iRNA_PseU:0 11764 chr1 153177531 153177531 1 + A G rs186653434 153177530 + 153177510 153177550 41 CCACTGCCACCTCCACCATGTACAACGCTGTGGGGCTGGAG CCACTGCCACCTCCACCATGTGCAACGCTGTGGGGCTGGAG < 41bp 0.813168749882779 0.450150012956341 0.79544044 0.2889843 prediction 0.626337499765558 Functional Loss - LELP1 ENSG00000203784 UTR3 Human protein_coding chr1:153177530 chr1:153177531 . . 0 22 hPsi_associated_SNPs_6347 0 0 0 0 0 unknown 0.438879169745672 0.438718423854515 0.59088088 0 hPsi_site_11764 iPseU_CNN:0.59088088;iRNA_PseU:0 11765 chr11 4929478 4929478 1 + A G rs199892939 4929477 + 4929457 4929497 41 GAACCCCATTGTGTACTGTGTAAAGACTCGACAAATCTGGG GAACCCCATTGTGTACTGTGTGAAGACTCGACAAATCTGGG < 41bp 0.885891055141718 0.572725232712013 0.46334952 0.22119427 prediction 0.62633164485941 Functional Loss - OR51A7 ENSG00000176895 CDS Human protein_coding chr11:4929477 chr11:4929478 synonymous SNV . 0 22 hPsi_associated_SNPs_6348 0 0 0 0 0 exosome 0.439781388499676 0.439408378354013 0 0 hPsi_site_11765 iPseU_CNN:0;iRNA_PseU:0 11766 chr1 159558258 159558258 1 + A G rs2808661 159558257 + 159558237 159558277 41 TCTGCGACAGGGTTACTTTGTAGAAGCTCAGCCCAAGATTG TCTGCGACAGGGTTACTTTGTGGAAGCTCAGCCCAAGATTG < 41bp 0.90394728127743 0.590783102494831 0.64924866 0.27389768 prediction 0.626328357565198 Functional Loss - APCS ENSG00000132703 CDS Human protein_coding chr1:159558257 chr1:159558258 synonymous SNV . 0 22 hPsi_associated_SNPs_6349 0 0 0 0 0 Endoplasmic reticulum 0.438718581750157 0.438718592995788 0.29849732 0 hPsi_site_11766 iPseU_CNN:0.29849732;iRNA_PseU:0 11767 chr15 31212812 31212812 1 + T G READ 31212811 + 31212791 31212831 41 GGGTGGATTTATACAAGGATTTTGTCTCGGTTTGTGGAAAT GGGTGGATTTATACAAGGATTGTGTCTCGGTTTGTGGAAAT < 41bp 0.840189410408699 0.527092944382066 0.32026812 0.314695 prediction 0.626192932053266 Functional Loss - FAN1 ENSG00000198690 CDS Human protein_coding chr15:31212811 chr15:31212812 nonsynonymous SNV 0.462 2 22 hPsi_associated_SNPs_6350 0 0 1 0 2 Cytosol 0.438718559335067 0.43871858702869 0 0 hPsi_site_11767 iPseU_CNN:0;iRNA_PseU:0 11768 chr13 113337633 113337633 1 + A G MESO 113337632 + 113337612 113337652 41 GGAGAGGAGCTATAATGGTCTATATTAAAGTTACTGTTCAG GGAGAGGAGCTATAATGGTCTGTATTAAAGTTACTGTTCAG < 41bp 0.813072937394207 0.43201410194813 0.26532164 0.20156118 prediction 0.626145874788414 Functional Loss - ATP11AUN ENSG00000197595 CDS Human lincRNA chr13:113337632 chr13:113337633 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_6351 0 0 0 0 1 unknown 0.438718592990831 0.438718592994198 0 0 hPsi_site_11768 iPseU_CNN:0;iRNA_PseU:0 11769 chr2 74042458 74042458 1 + T G UCEC 74042457 + 74042437 74042477 41 GATGAGATTAAAACCAACCTTTCAAAGCCTCTAGATGTCCA GATGAGATTAAAACCAACCTTGCAAAGCCTCTAGATGTCCA < 41bp 0.816174860713657 0.503106793806148 0.5278003 0.30146796 prediction 0.626136133815018 Functional Loss - C2orf78 ENSG00000187833 CDS Human protein_coding chr2:74042457 chr2:74042458 nonsynonymous SNV 0.020 0 22 hPsi_associated_SNPs_6352 0 0 0 0 0 unknown 0.438716759396532 0.438716649715676 0.0556006 0 hPsi_site_11769 iPseU_CNN:0.0556006;iRNA_PseU:0 11770 chr16 24267079 24267079 1 + A G rs143905141 24267078 + 24267058 24267098 41 GAGGGAGCGCCAGAGTGCGCTACGGGCTTCGCTCCCCTTCC GAGGGAGCGCCAGAGTGCGCTGCGGGCTTCGCTCCCCTTCC < 41bp 0.813062767055303 0.460978527447252 0.72695565 0.31426784 prediction 0.626125534110605 Functional Loss - CACNG3 ENSG00000006116 UTR5 Human protein_coding chr16:24267078 chr16:24267079 . . 0 22 hPsi_associated_SNPs_6353 0 0 0 0 0 nucleus 0.438718576403815 0.438718716310669 0.4539113 0 hPsi_site_11770 iPseU_CNN:0.4539113;iRNA_PseU:0 11771 chr12 122260428 122260428 1 + A G rs146687724 122260427 + 122260407 122260447 41 GAAGTGGAGCCGGAGCCCCCTATGATGCTCCCCTTGCCGCT GAAGTGGAGCCGGAGCCCCCTGTGATGCTCCCCTTGCCGCT < 41bp 0.813060190183763 0.390808354181157 0.4016893 0.38461316 prediction 0.626120380367526 Functional Loss - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122260427 chr12:122260428 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6354 0 0 1 0 1 chromatin 0.438717611215382 0.438718585161354 0 0 hPsi_site_11771 iPseU_CNN:0;iRNA_PseU:0 11772 chr15 76018451 76018451 1 + A C UCEC 76018450 + 76018430 76018470 41 CTATCTCTTGGATCCCAAAATAACTCGGTTTGGAATGTCCA CTATCTCTTGGATCCCAAAATCACTCGGTTTGGAATGTCCA < 41bp 0.813053624611174 0.436091033245139 0.31398764 0.24992278 prediction 0.626107249222348 Functional Loss - ODF3L1 ENSG00000182950 CDS Human protein_coding chr15:76018450 chr15:76018451 synonymous SNV . 0 22 hPsi_associated_SNPs_6355 0 0 0 0 2 exosome 0.438718977192736 0.43871865058849 0 0 hPsi_site_11772 iPseU_CNN:0;iRNA_PseU:0 11773 chr3 38126829 38126829 1 + T G UCEC 38126828 + 38126808 38126848 41 CTGCCAGTACATTGTCCAGTTTTTTCCCGACTGCCTTGGGG CTGCCAGTACATTGTCCAGTTGTTTCCCGACTGCCTTGGGG < 41bp 0.813048949288339 0.498954799284285 0.65286446 0.29001075 prediction 0.626097898576678 Functional Loss - DLEC1 ENSG00000008226 CDS Human protein_coding chr3:38126828 chr3:38126829 nonsynonymous SNV 0.479 4 22 hPsi_associated_SNPs_6356 0 0 0 0 1 chromatin 0.42110876469664 0.438140806704591 0.30572892 0 hPsi_site_11773 iPseU_CNN:0.30572892;iRNA_PseU:0 11774 chr1 148756499 148756499 1 + A G rs201435207 148756498 + 148756478 148756518 41 GTCTTACAGGACTCACTGGATAGATGTTATTCGACTCAGTC GTCTTACAGGACTCACTGGATGGATGTTATTCGACTCAGTC < 41bp 0.813018995638683 0.413783720766288 0.2268892 0.1813902 prediction 0.626037991277366 Functional Loss - NBPF25P ENSG00000203827 CDS Human other chr1:148756498 chr1:148756499 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_6357 0 0 0 0 1 unknown 0.438815075879892 0.438766657504393 0 0 hPsi_site_11774 iPseU_CNN:0;iRNA_PseU:0 11775 chr19 42813883 42813883 1 + T G CESC 42813882 + 42813862 42813902 41 CCACGATCCTCCTGTGGCCATTCGGGATCCACCTGTGGTCC CCACGATCCTCCTGTGGCCATGCGGGATCCACCTGTGGTCC < 41bp 0.823292952627726 0.51028322680299 0.49894795 0.2822237 prediction 0.626019451649472 Functional Loss - PRR19 ENSG00000188368 CDS Human protein_coding chr19:42813882 chr19:42813883 nonsynonymous SNV 0.046 0 22 hPsi_associated_SNPs_6358 0 0 0 0 0 exosome 0.4392717549925 0.43869119996745 0 0 hPsi_site_11775 iPseU_CNN:0;iRNA_PseU:0 11776 chr1 210414985 210414985 1 + A G UCEC 210414984 + 210414964 210415004 41 TTATCGATGATCCTGAAGTGTACCTCCGAAGATCTGTCCTT TTATCGATGATCCTGAAGTGTGCCTCCGAAGATCTGTCCTT < 41bp 0.813007839832794 0.405851636256855 0.7880374 0.3072082 prediction 0.626015679665588 Functional Loss - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210414984 chr1:210414985 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6359 0 0 1 0 1 exosome 0.438718553530517 0.438718633547752 0.5760748 0 hPsi_site_11776 iPseU_CNN:0.5760748;iRNA_PseU:0 11777 chr3 193372713 193372713 1 + A G UCEC 193372712 + 193372692 193372732 41 CTCATGTGATTGAAAACATCTACCTTCCAGCTGCGCAGACC CTCATGTGATTGAAAACATCTGCCTTCCAGCTGCGCAGACC < 41bp 0.813005331954124 0.405546886774655 0.4333679 0.22409749 prediction 0.626010663908248 Functional Loss - OPA1 ENSG00000198836 CDS Human protein_coding chr3:193372712 chr3:193372713 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_6360 0 0 1 0 1 Nucleus 0.438150445312917 0.437367989132782 0 0 hPsi_site_11777 iPseU_CNN:0;iRNA_PseU:0 11778 chr12 9144884 9144884 1 + A G GBM 9144883 + 9144863 9144903 41 AGTTCTTCTGAGTGTGCTGCTATACCAGTGGATCCTGTGCC AGTTCTTCTGAGTGTGCTGCTGTACCAGTGGATCCTGTGCC < 41bp 0.812999806415978 0.395666885180074 0.2542429 0.19258401 prediction 0.625999612831956 Functional Loss - KLRG1 ENSG00000139187 CDS Human protein_coding chr12:9144883 chr12:9144884 synonymous SNV . 0 22 hPsi_associated_SNPs_6361 0 0 0 0 1 cytosol 0.438707656949336 0.43870663597718 0 0 hPsi_site_11778 iPseU_CNN:0;iRNA_PseU:0 11779 chr1 99150477 99150477 1 + A G LUSC 99150476 + 99150456 99150496 41 GACATGAACTCCTTCAGCCCTATGATGCCAACATCCCCTTT GACATGAACTCCTTCAGCCCTGTGATGCCAACATCCCCTTT < 41bp 0.812976316483746 0.401127269299254 0.31680864 0.24011007 prediction 0.625952632967492 Functional Loss - SNX7 ENSG00000162627 CDS Human protein_coding chr1:99150476 chr1:99150477 nonsynonymous SNV 0.894 0 22 hPsi_associated_SNPs_6362 0 0 1 0 1 Ribosome 0.438718594859197 0.438718593519515 0 0 hPsi_site_11779 iPseU_CNN:0;iRNA_PseU:0 11780 chr7 17379475 17379475 1 + A G LUAD 17379474 + 17379454 17379494 41 CCACAACAATATAATGTCTTTACAGACTTACATGGGATCAG CCACAACAATATAATGTCTTTGCAGACTTACATGGGATCAG < 41bp 0.812957423647398 0.400902364410134 0.31381297 0.291865 prediction 0.625914847294796 Functional Loss - AHR ENSG00000106546 CDS Human protein_coding chr7:17379474 chr7:17379475 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_6363 0 0 1 1 0 Endoplasmic reticulum 0.438699472702445 0.438403943072672 0 0 hPsi_site_11780 iPseU_CNN:0;iRNA_PseU:0 11781 chr3 9876556 9876556 1 + T G UCEC 9876555 + 9876535 9876575 41 TCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAGCAT TCCCTCCCACCGAACCTTGATGTCAAGGTGGCACCCAGCAT < 41bp 0.827057938028543 0.514105553228938 0.40285885 0.27968457 prediction 0.625904769599208 Functional Loss - TTLL3 ENSG00000214021 CDS Human protein_coding chr3:9876555 chr3:9876556 nonsynonymous SNV 0.968 1 22 hPsi_associated_SNPs_6364 0 0 1 1 0 chromatin 0.438718593378025 0.438645824631958 0 0 hPsi_site_11781 iPseU_CNN:0;iRNA_PseU:0 11782 chr12 7067110 7067110 1 + A G UCEC 7067109 + 7067089 7067129 41 TGATTCGGGAGATCTGGCATTACCAGTACCTGAGCTGGCCC TGATTCGGGAGATCTGGCATTGCCAGTACCTGAGCTGGCCC < 41bp 0.914580861638908 0.601630225340289 0.7254636 0.29860365 prediction 0.625901272597237 Functional Loss - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7067109 chr12:7067110 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_6365 0 0 0 0 1 chromatin 0.424340446107867 0.436548449959671 0.4509272 0 hPsi_site_11782 iPseU_CNN:0.4509272;iRNA_PseU:0 11783 chr11 57505447 57505447 1 + T G SKCM 57505446 + 57505426 57505466 41 AAAGTGGCCAACACAATTCTTTTCTTCCGCTTGGATATTCG AAAGTGGCCAACACAATTCTTGTCTTCCGCTTGGATATTCG < 41bp 0.839054749125941 0.52611751529566 0.58112013 0.19938552 prediction 0.625874467660561 Functional Loss - TMX2 ENSG00000213593 CDS Human protein_coding chr11:57505446 chr11:57505447 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6366 0 0 1 0 2 Ribosome 0.438718318243584 0.438718814905192 0.16224026 0 hPsi_site_11783 iPseU_CNN:0.16224026;iRNA_PseU:0 11784 chr6 29911111 29911111 1 + A G PAAD 29911110 + 29911090 29911130 41 ACGGGCGCTTCCTCCGCGGGTACCGGCAGGACGCCTACGAC ACGGGCGCTTCCTCCGCGGGTGCCGGCAGGACGCCTACGAC < 41bp 0.841807705260449 0.528874080397659 0.46849167 0.17033201 prediction 0.62586724972558 Functional Loss - HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911110 chr6:29911111 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_6367 0 0 1 0 0 Endoplasmic reticulum 0.438723403200746 0.438814265754403 0 0 hPsi_site_11784 iPseU_CNN:0;iRNA_PseU:0 11785 chr3 179336307 179336307 1 + A G PAAD 179336306 + 179336286 179336326 41 TGAAGCTGAAAAGGCTGAATTACGGTAGGAAAAACGAGGGG TGAAGCTGAAAAGGCTGAATTGCGGTAGGAAAAACGAGGGG < 41bp 0.812928353941924 0.423821651036116 0.2138212 0.2153655 prediction 0.625856707883847 Functional Loss - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179336306 chr3:179336307 synonymous SNV . 0 22 hPsi_associated_SNPs_6368 0 0 1 3 1 Ribosome 0.438718585669916 0.438718748358137 0 0 hPsi_site_11785 iPseU_CNN:0;iRNA_PseU:0 11786 chr3 45588916 45588916 1 + T G UCEC 45588915 + 45588895 45588935 41 ACCAGGACAAAGTCCACGAATTTGTTCTTCAAAGCGAGCTG ACCAGGACAAAGTCCACGAATGTGTTCTTCAAAGCGAGCTG < 41bp 0.837496669055254 0.524576338335555 0.4645026 0.26145455 prediction 0.625840661439398 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45588915 chr3:45588916 nonsynonymous SNV 0.983 1 22 hPsi_associated_SNPs_6369 0 0 1 0 1 Endoplasmic reticulum 0.438718589852747 0.43862173798393 0 0 hPsi_site_11786 iPseU_CNN:0;iRNA_PseU:0 11787 chr17 9763299 9763299 1 + A G STAD 9763298 + 9763278 9763318 41 CAGTCCAGGTTCTCTTGCATTACTTTGTGGGTGCCAATTAC CAGTCCAGGTTCTCTTGCATTGCTTTGTGGGTGCCAATTAC < 41bp 0.81289603651619 0.383517350951973 0.3221557 0.2783538 prediction 0.62579207303238 Functional Loss - GLP2R ENSG00000065325 CDS Human protein_coding chr17:9763298 chr17:9763299 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_6370 0 0 0 0 1 nucleus 0.438768284155166 0.438744540702342 0 0 hPsi_site_11787 iPseU_CNN:0;iRNA_PseU:0 11788 chr10 112647591 112647591 1 + A G STAD 112647590 + 112647570 112647610 41 GATGTGGAAAAATCATTTGATAAATTGTTGAAAGATCTACC GATGTGGAAAAATCATTTGATGAATTGTTGAAAGATCTACC < 41bp 0.812870837108831 0.397007091518526 0.34348696 0.30149233 prediction 0.625741674217661 Functional Loss - PDCD4 ENSG00000150593 CDS Human protein_coding chr10:112647590 chr10:112647591 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_6371 0 0 1 0 1 Cytosol 0.438683819253965 0.438719010087432 0 0 hPsi_site_11788 iPseU_CNN:0;iRNA_PseU:0 11789 chr17 16335135 16335135 1 + A G STAD 16335134 + 16335114 16335154 41 TGCTGCGCTTCCTTCTGATCTACTTAGTCTTCCTTTTCGGC TGCTGCGCTTCCTTCTGATCTGCTTAGTCTTCCTTTTCGGC < 41bp 0.812870627263339 0.381264829728064 0.553526 0.330272 prediction 0.625741254526679 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335134 chr17:16335135 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6372 0 0 0 0 2 Endoplasmic reticulum 0.438718688299024 0.438718594377416 0.107052 0 hPsi_site_11789 iPseU_CNN:0.107052;iRNA_PseU:0 11790 chr19 10742021 10742021 1 + A G COAD 10742020 + 10742000 10742040 41 GCAGCTCCCGGGACTTTGAGTACTATAAGCAGTTCTGTGTT GCAGCTCCCGGGACTTTGAGTGCTATAAGCAGTTCTGTGTT < 41bp 0.812857307521267 0.379579033988407 0.47944546 0.29301924 prediction 0.625714615042535 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10742020 chr19:10742021 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_6373 0 0 1 0 2 Ribosome 0.438718560985306 0.438713182373849 0 0 hPsi_site_11790 iPseU_CNN:0;iRNA_PseU:0 11791 chr12 109288083 109288083 1 + A G STAD 109288082 + 109288062 109288102 41 GATTGTCAACTGCACTGGGGTATGGGCTGGGGCGCTACAAC GATTGTCAACTGCACTGGGGTGTGGGCTGGGGCGCTACAAC < 41bp 0.915422752628358 0.602588182333308 0.2849862 0.24163848 prediction 0.625669140590099 Functional Loss - DAO ENSG00000110887 CDS Human protein_coding chr12:109288082 chr12:109288083 synonymous SNV . 0 22 hPsi_associated_SNPs_6374 0 0 0 0 2 Endoplasmic reticulum 0.438694933710177 0.438702759799757 0 0 hPsi_site_11791 iPseU_CNN:0;iRNA_PseU:0 11792 chr12 113534680 113534680 1 + A G UCEC 113534679 + 113534659 113534699 41 ACGGCTACCCGGACGCTAGCTACCTAGACAACGTGCTGGCT ACGGCTACCCGGACGCTAGCTGCCTAGACAACGTGCTGGCT < 41bp 0.81281359659402 0.396632645181183 0.42126283 0.12459165 prediction 0.62562719318804 Functional Loss - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113534679 chr12:113534680 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6375 0 0 0 0 0 Endoplasmic reticulum 0.438700339830736 0.438720088904288 0 0 hPsi_site_11792 iPseU_CNN:0;iRNA_PseU:0 11793 chr8 23083256 23083256 1 + A C rs11780618 23083255 + 23083235 23083275 41 TGATCCGCCCGCTTCGGCCTTACAAAGTGCTGGGATTACAA TGATCCGCCCGCTTCGGCCTTCCAAAGTGCTGGGATTACAA < 41bp 0.812812459635193 0.479755435642492 0.647781 0.5678619 prediction 0.625624919270386 Functional Loss - LOC389641 ENSG00000246582 ncRNA_exonic Human processed_transcript chr8:23083255 chr8:23083256 . . 0 22 hPsi_associated_SNPs_6376 0 0 0 0 0 unknown 0.438718596585356 0.438718592995102 0.1598382 0 hPsi_site_11793 iPseU_CNN:0.1598382;iRNA_PseU:0 11794 chr20 18531787 18531787 1 + A C UCEC 18531786 + 18531766 18531806 41 GACAGAATTTTGCTGATGGATACTTTCTTTCAAATTGTCAT GACAGAATTTTGCTGATGGATCCTTTCTTTCAAATTGTCAT < 41bp 0.812810302125249 0.455297058208702 0.5565799 0.33420634 prediction 0.625620604250497 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18531786 chr20:18531787 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6377 0 0 1 0 2 Cytosol 0.438716574377093 0.43872771670922 0.1131598 0 hPsi_site_11794 iPseU_CNN:0.1131598;iRNA_PseU:0 11795 chr10 118386442 118386442 1 + A G UCEC 118386441 + 118386421 118386461 41 GGCACGGGTCCCGGGCAATGTACACCCAAGCCGTGCAAAAC GGCACGGGTCCCGGGCAATGTGCACCCAAGCCGTGCAAAAC < 41bp 0.812799587561143 0.409444447185359 0.5323644 0.2601382 prediction 0.625599175122286 Functional Loss - PNLIPRP2 ENSG00000165862 CDS Human other chr10:118386441 chr10:118386442 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_6378 0 0 0 0 2 unknown 0.438718603438575 0.438717980920027 0.0647287999999999 0 hPsi_site_11795 iPseU_CNN:0.0647287999999999;iRNA_PseU:0 11796 chrX 153556191 153556191 1 + T G UCEC 153556190 + 153556170 153556210 41 TTTGCTGTTCTGCAGATATTTTTATCCGTGTCATCGACCTG TTTGCTGTTCTGCAGATATTTGTATCCGTGTCATCGACCTG < 41bp 0.817230611211872 0.504446245882868 0.315702 0.28084892 prediction 0.625568730658009 Functional Loss - TKTL1 ENSG00000007350 CDS Human protein_coding chrX:153556190 chrX:153556191 nonsynonymous SNV 0.876 1 22 hPsi_associated_SNPs_6379 0 0 0 0 1 exosome 0.43862351218277 0.438733054362644 0 0 hPsi_site_11796 iPseU_CNN:0;iRNA_PseU:0 11797 chr7 23314453 23314453 1 + A G rs117715509 23314452 + 23314432 23314472 41 GAGTGAAGGAATGATATTCATATATTCATTTATTCCATGGA GAGTGAAGGAATGATATTCATGTATTCATTTATTCCATGGA < 41bp 0.812774292868045 0.461333224840185 0.16906139 0.123482496 prediction 0.625548585736091 Functional Loss - GPNMB ENSG00000136235 UTR3 Human protein_coding chr7:23314452 chr7:23314453 . . 0 22 hPsi_associated_SNPs_6380 0 0 0 0 0 Endoplasmic reticulum 0.447662062806299 0.432986422085769 0 0 hPsi_site_11797 iPseU_CNN:0;iRNA_PseU:0 11798 chr16 23205535 23205535 1 + A G UCEC 23205534 + 23205514 23205554 41 CCGATGCATGGGAATTGCTATACTTTCAACAACAGAGAAAA CCGATGCATGGGAATTGCTATGCTTTCAACAACAGAGAAAA < 41bp 0.812721273287374 0.386203524360681 0.7124701 0.3534156 prediction 0.625442546574749 Functional Loss - SCNN1G ENSG00000166828 CDS Human protein_coding chr16:23205534 chr16:23205535 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_6381 0 0 0 0 2 exosome 0.438705387778917 0.438705829200168 0.4249402 0 hPsi_site_11798 iPseU_CNN:0.4249402;iRNA_PseU:0 11799 chr11 117265656 117265656 1 + A C LUAD 117265655 + 117265635 117265675 41 GGAAAGGAAGCTCCAGGATTTAGAGTTGGACCTTGAAACCA GGAAAGGAAGCTCCAGGATTTCGAGTTGGACCTTGAAACCA < 41bp 0.879987375922407 0.567267034648129 0.40879196 0.22414565 prediction 0.625440682548557 Functional Loss - CEP164 ENSG00000110274 CDS Human protein_coding chr11:117265655 chr11:117265656 nonsynonymous SNV 0.275 3 22 hPsi_associated_SNPs_6382 0 0 0 0 2 Cytosol 0.438718239029443 0.438718593006383 0 0 hPsi_site_11799 iPseU_CNN:0;iRNA_PseU:0 11800 chr7 6155125 6155125 1 + A G LUSC 6155124 + 6155104 6155144 41 ACACACCACCTCTTGCCAATTACATGCTATCACATGAACAC ACACACCACCTCTTGCCAATTGCATGCTATCACATGAACAC < 41bp 0.81270910860897 0.409892989552564 0.63554883 0.3273287 prediction 0.62541821721794 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6155124 chr7:6155125 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6383 0 0 1 0 1 Ribosome 0.439036960241559 0.441179355368914 0.27109766 0 hPsi_site_11800 iPseU_CNN:0.27109766;iRNA_PseU:0 11801 chr11 63723945 63723945 1 + A G rs320127 63723944 + 63723924 63723964 41 GTCTCTTTCCAGTCACTGGATACGTGGCACCAACTGGTCAA GTCTCTTTCCAGTCACTGGATGCGTGGCACCAACTGGTCAA < 41bp 0.812701943204513 0.482624670842672 0.8990361 0.28270066 prediction 0.625403886409027 Functional Loss - NAA40 ENSG00000110583 UTR3 Human protein_coding chr11:63723944 chr11:63723945 . . 0 22 hPsi_associated_SNPs_6384 0 0 1 0 0 Ribosome 0.438710989357558 0.438720631079974 0.7980722 0 hPsi_site_11801 iPseU_CNN:0.7980722;iRNA_PseU:0 11802 chr10 134779355 134779355 1 + A G rs560499099 134779354 + 134779334 134779374 41 TATATGTGTTTGCATGTGTTTACATGTGTTTGCATGTGCCT TATATGTGTTTGCATGTGTTTGCATGTGTTTGCATGTGCCT < 41bp 0.812689075363189 0.459824531301554 0.68757075 0.2800622 prediction 0.625378150726378 Functional Loss - LINC01168 ENSG00000240707 ncRNA_exonic Human lincRNA chr10:134779354 chr10:134779355 . . 0 22 hPsi_associated_SNPs_6385 0 0 0 0 0 unknown 0.433823980911724 0.434234277788917 0.3751415 0 hPsi_site_11802 iPseU_CNN:0.3751415;iRNA_PseU:0 11803 chr19 47421973 47421973 1 + A G LIHC 47421972 + 47421952 47421992 41 AAGATGTCCGAATTCCCACCTACAACATCAGTGTGGTGGGA AAGATGTCCGAATTCCCACCTGCAACATCAGTGTGGTGGGA < 41bp 0.812676453802924 0.423161734725846 0.54996943 0.39213037 prediction 0.625352907605848 Functional Loss - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47421972 chr19:47421973 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6386 0 0 1 0 0 Ribosome 0.438718593111812 0.438718589041887 0.09993886 0 hPsi_site_11803 iPseU_CNN:0.09993886;iRNA_PseU:0 11804 chr6 160225048 160225048 1 + T G UCEC 160225047 + 160225027 160225067 41 CTTCCCTACAACGTTTGGGATTTTGGACTCAGAATTCTCCT CTTCCCTACAACGTTTGGGATGTTGGACTCAGAATTCTCCT < 41bp 0.812667011978942 0.47499947192562 0.4226891 0.3235808 prediction 0.625334023957885 Functional Loss - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160225047 chr6:160225048 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6387 0 0 1 0 2 exosome 0.438718602773222 0.438807984859056 0 0 hPsi_site_11804 iPseU_CNN:0;iRNA_PseU:0 11805 chr9 33798543 33798543 1 + A G SARC 33798542 + 33798522 33798562 41 GTGCTGACCCAGGCTGAGTGTAAAGCCTCCTACCCTGGAAA GTGCTGACCCAGGCTGAGTGTGAAGCCTCCTACCCTGGAAA < 41bp 0.914885693239519 0.60223804601567 0.7005952 0.38750982 prediction 0.625295294447696 Functional Loss - PRSS3 ENSG00000010438 CDS Human protein_coding chr9:33798542 chr9:33798543 nonsynonymous SNV 0.040 1 22 hPsi_associated_SNPs_6388 0 0 0 0 2 Ribosome 0.438769313765539 0.438728412704027 0.4011904 0 hPsi_site_11805 iPseU_CNN:0.4011904;iRNA_PseU:0 11806 chr20 44505759 44505759 1 + T G SKCM 44505758 + 44505738 44505778 41 TTTCTTAAGGTAGATGAGGGTTCCATGGCTTCCTTCAGTGT TTTCTTAAGGTAGATGAGGGTGCCATGGCTTCCTTCAGTGT < 41bp 0.835825587300049 0.523179864204775 0.6358218 0.33026034 prediction 0.625291446190547 Functional Loss - ZSWIM3 ENSG00000132801 CDS Human protein_coding chr20:44505758 chr20:44505759 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6389 0 0 0 0 0 Cytosol 0.438718562420869 0.438718593060452 0.2716436 0 hPsi_site_11806 iPseU_CNN:0.2716436;iRNA_PseU:0 11807 chr11 114278411 114278411 1 + A G UCEC 114278410 + 114278390 114278430 41 ATCATGGGTCTGACCATCATTACAGAGGAAAGAGAGATGAT ATCATGGGTCTGACCATCATTGCAGAGGAAAGAGAGATGAT < 41bp 0.812643476031995 0.420523277017053 0.43092668 0.31289858 prediction 0.62528695206399 Functional Loss - RBM7 ENSG00000076053 CDS Human protein_coding chr11:114278410 chr11:114278411 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6390 0 0 1 0 0 Cytosol 0.434307164427833 0.422640375785317 0 0 hPsi_site_11807 iPseU_CNN:0;iRNA_PseU:0 11808 chr17 18673345 18673345 1 + A G rs117585894 18673344 + 18673324 18673364 41 CGGGAACTGTATGAAGGTGTTAAAAGCCAATGGCAGAGGTG CGGGAACTGTATGAAGGTGTTGAAAGCCAATGGCAGAGGTG < 41bp 0.903802943488041 0.59116307214937 0.72388345 0.6215098 prediction 0.625279742677342 Functional Loss - FBXW10 ENSG00000171931 CDS Human protein_coding chr17:18673344 chr17:18673345 synonymous SNV . 0 22 hPsi_associated_SNPs_6391 0 0 0 0 1 Nucleus 0.438701029571777 0.438503809977947 0.2047473 0 hPsi_site_11808 iPseU_CNN:0.2047473;iRNA_PseU:0 11809 chr8 124448756 124448756 1 + A G HNSC 124448755 + 124448735 124448775 41 AACTTCATTTATGATCTCGATACTGTCTTGCCATTTCCCTG AACTTCATTTATGATCTCGATGCTGTCTTGCCATTTCCCTG < 41bp 0.812624034748951 0.39347011163415 0.7034408 0.29039276 prediction 0.625248069497902 Functional Loss - WDYHV1 ENSG00000156795 CDS Human protein_coding chr8:124448755 chr8:124448756 nonsynonymous SNV 0.954 2 22 hPsi_associated_SNPs_6392 0 0 0 0 2 Ribosome 0.436696923016878 0.438756145093618 0.4068816 0 hPsi_site_11809 iPseU_CNN:0.4068816;iRNA_PseU:0 11810 chr19 48244194 48244194 1 + A G rs7255434 48244193 + 48244173 48244213 41 CTCGCTGAAGCCGAAGCTGCTAGAGGCACTGGACGAGATGC CTCGCTGAAGCCGAAGCTGCTGGAGGCACTGGACGAGATGC < 41bp 0.81260045931009 0.39977454249354 0.32563347 0.26927763 prediction 0.625200918620179 Functional Loss - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48244193 chr19:48244194 synonymous SNV . 0 22 hPsi_associated_SNPs_6393 0 0 0 0 1 Nucleus 0.438716594446914 0.438719051816996 0 0 hPsi_site_11810 iPseU_CNN:0;iRNA_PseU:0 11811 chr14 20388997 20388997 1 + A G STAD 20388996 + 20388976 20389016 41 ATTTGTCAGGCTTCTTTTGCTACCCCTAAAATGATTGCAGA ATTTGTCAGGCTTCTTTTGCTGCCCCTAAAATGATTGCAGA < 41bp 0.81259722677169 0.429020220757662 0.38606936 0.20951211 prediction 0.62519445354338 Functional Loss - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20388996 chr14:20388997 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_6394 0 0 0 0 0 unknown 0.438709270553723 0.438574975554435 0 0 hPsi_site_11811 iPseU_CNN:0;iRNA_PseU:0 11812 chr11 988598 988598 1 + A G STAD 988597 + 988577 988617 41 AGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGCAGC AGCGGGCCGTGGACCTCCTCTGCGCCATGTGCGACCGCAGC < 41bp 0.812530229786199 0.376491254728974 0.81828874 0.7078393 prediction 0.625060459572399 Functional Loss - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988597 chr11:988598 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_6395 0 0 1 0 2 Nucleus 0.438733729967637 0.438819397921679 0.22089888 0 hPsi_site_11812 iPseU_CNN:0.22089888;iRNA_PseU:0 11813 chr19 46815796 46815796 1 + A G UCEC 46815795 + 46815775 46815815 41 GCCAGGCAGTAACAGGGCAGTATCGCTTCCTGGCCCGGAGT GCCAGGCAGTAACAGGGCAGTGTCGCTTCCTGGCCCGGAGT < 41bp 0.812522761110181 0.38528666123183 0.7722661 0.4456483 prediction 0.625045522220361 Functional Loss - HIF3A ENSG00000124440 CDS Human protein_coding chr19:46815795 chr19:46815796 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6396 0 0 0 0 1 Nucleus 0.438718592993523 0.438718592977561 0.5445322 0 hPsi_site_11813 iPseU_CNN:0.5445322;iRNA_PseU:0 11814 chr5 424022 424022 1 + A G UCEC 424021 + 424001 424041 41 GCACAGGCACGCCCACCGAGTACTCGGCCTTCCTGACCCGC GCACAGGCACGCCCACCGAGTGCTCGGCCTTCCTGACCCGC < 41bp 0.812510966335536 0.375413944316434 0.7451925 0.27065498 prediction 0.625021932671072 Functional Loss - AHRR ENSG00000063438 CDS Human protein_coding chr5:424021 chr5:424022 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_6397 0 0 0 0 2 chromatin 0.438715120783956 0.438666520069697 0.490385 0 hPsi_site_11814 iPseU_CNN:0.490385;iRNA_PseU:0 11815 chr21 31964811 31964811 1 + A G SKCM 31964810 + 31964790 31964830 41 GTGGCAGCTACTACAGAAACTACAATGGTGGCCATGGCTAT GTGGCAGCTACTACAGAAACTGCAATGGTGGCCATGGCTAT < 41bp 0.888734838952406 0.576242181829767 0.3196629 0.2723305 prediction 0.624985314245277 Functional Loss - KRTAP6-3 ENSG00000212938 CDS Human protein_coding chr21:31964810 chr21:31964811 nonsynonymous SNV 0.323 0 22 hPsi_associated_SNPs_6398 0 0 0 0 0 unknown 0.438731742974813 0.438718871750919 0 0 hPsi_site_11815 iPseU_CNN:0;iRNA_PseU:0 11816 chr11 51515672 51515672 1 + A C HNSC 51515671 + 51515651 51515691 41 ATCTGCAAGCCCTTGCACTATATGACTATCATGAACCAGTG ATCTGCAAGCCCTTGCACTATCTGACTATCATGAACCAGTG < 41bp 0.86790495412321 0.55541489502049 0.2236653 0.27756804 prediction 0.62498011820544 Functional Loss - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515671 chr11:51515672 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_6399 0 0 0 0 0 unknown 0.438720666157798 0.438516707604621 0 0 hPsi_site_11816 iPseU_CNN:0;iRNA_PseU:0 11817 chr12 49742946 49742946 1 + T G UCEC 49742945 + 49742925 49742965 41 TTTTGGCCTTGTGGCACTGATTAGCCTTTCTTCCATGGTCA TTTTGGCCTTGTGGCACTGATGAGCCTTTCTTCCATGGTCA < 41bp 0.847552119078579 0.535075908842833 0.23372397 0.21695974 prediction 0.624952420471493 Functional Loss - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49742945 chr12:49742946 nonsynonymous SNV 0.983 1 22 hPsi_associated_SNPs_6400 0 0 0 0 0 Ribosome 0.438718592993995 0.438730107009382 0 0 hPsi_site_11817 iPseU_CNN:0;iRNA_PseU:0 11818 chr16 57685349 57685349 1 + T G BLCA 57685348 + 57685328 57685368 41 GGAACCGACATGCTGGGAGATTACATCTTCTCTATGGCAAG GGAACCGACATGCTGGGAGATGACATCTTCTCTATGGCAAG < 41bp 0.812469421817418 0.487590590202781 0.3023051 0.26607555 prediction 0.624938843634837 Functional Loss - ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57685348 chr16:57685349 stopgain 0.001 0 22 hPsi_associated_SNPs_6401 0 0 1 0 0 Nucleus 0.4387185929914 0.438897370335551 0 0 hPsi_site_11818 iPseU_CNN:0;iRNA_PseU:0 11819 chr2 191827611 191827611 1 + A G COAD 191827610 + 191827590 191827630 41 TTTGGACACCATGATGTATTTAAAATTCTCCAAGAATACCA TTTGGACACCATGATGTATTTGAAATTCTCCAAGAATACCA < 41bp 0.812466006106861 0.426179125613186 0.26086843 0.2405419 prediction 0.624932012213721 Functional Loss - GLS ENSG00000115419 CDS Human protein_coding chr2:191827610 chr2:191827611 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_6402 0 0 0 1 1 Endoplasmic reticulum 0.438719879022004 0.438718591518666 0 0 hPsi_site_11819 iPseU_CNN:0;iRNA_PseU:0 11820 chr1 99771283 99771283 1 + A G SKCM 99771282 + 99771262 99771302 41 TTCCTGCCCAGTGATGAGAGTATGTTTCAGCACAGAGACGC TTCCTGCCCAGTGATGAGAGTGTGTTTCAGCACAGAGACGC < 41bp 0.812450376480037 0.402466139690214 0.35373822 0.30340278 prediction 0.624900752960074 Functional Loss - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99771282 chr1:99771283 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6403 0 0 0 0 1 exosome 0.438721858899721 0.438738347536594 0 0 hPsi_site_11820 iPseU_CNN:0;iRNA_PseU:0 11821 chr14 62205023 62205023 1 + A G UCEC 62205022 + 62205002 62205042 41 GAGTCACTGGAACTTTCTTTTACCATGCCCCAGATTCAGGA GAGTCACTGGAACTTTCTTTTGCCATGCCCCAGATTCAGGA < 41bp 0.906920816689017 0.59447265831824 0.5811268 0.3548494 prediction 0.624896316741554 Functional Loss - HIF1A ENSG00000100644 CDS Human protein_coding chr14:62205022 chr14:62205023 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6404 0 0 1 0 1 Cytosol 0.4387185952351 0.438718594038854 0.1622536 0 hPsi_site_11821 iPseU_CNN:0.1622536;iRNA_PseU:0 11822 chr11 113659993 113659993 1 + A C rs906846 113659992 + 113659972 113660012 41 CGGCGGCGGGAGGCAGCATGTAGGTTGCAGGGCTGAAGAAG CGGCGGCGGGAGGCAGCATGTCGGTTGCAGGGCTGAAGAAG < 41bp 0.843032580352342 0.530585167668314 0.8496641 0.5526033 prediction 0.624894825368056 Functional Loss - CLDN25;USP28 ENSG00000255870;ENSG00000256167 ncRNA_exonic Human other chr11:113659992 chr11:113659993 . . 0 22 hPsi_associated_SNPs_6405 0 0 0 0 0 unknown 0.438698989207527 0.438720859745005 0.5941216 0 hPsi_site_11822 iPseU_CNN:0.5941216;iRNA_PseU:0 11823 chr14 103803146 103803146 1 + T G COAD 103803145 + 103803125 103803165 41 TGGATGGATTCATTAAAAAATTTGTTCTCTGTCCTGAATGT TGGATGGATTCATTAAAAAATGTGTTCTCTGTCCTGAATGT < 41bp 0.812444648590309 0.481222715378916 0.41338488 0.33165 prediction 0.624889297180618 Functional Loss - EIF5 ENSG00000100664 CDS Human protein_coding chr14:103803145 chr14:103803146 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6406 0 0 1 0 1 Cytosol 0.438689490897393 0.438145635364704 0 0 hPsi_site_11823 iPseU_CNN:0;iRNA_PseU:0 11824 chr5 17276092 17276092 1 + A C rs530857325 17276091 + 17276071 17276111 41 TCTCTCTCTATCTCTCTCTCTATCTCCTCTCTCTCTCTCCT TCTCTCTCTATCTCTCTCTCTCTCTCCTCTCTCTCTCTCCT < 41bp 0.812422957504123 0.44543510339564 0.4051432 0.33154905 prediction 0.624845915008247 Functional Loss - BASP1 ENSG00000176788 UTR3 Human protein_coding chr5:17276091 chr5:17276092 . . 0 22 hPsi_associated_SNPs_6407 0 0 1 1 0 Nucleus 0.428181512810554 0.43638215599357 0 0 hPsi_site_11824 iPseU_CNN:0;iRNA_PseU:0 11825 chr12 8197455 8197455 1 + A G BLCA 8197454 + 8197434 8197474 41 TATAACACCAACCATGACTTTAAATTCTCCTACTCAGAGAT TATAACACCAACCATGACTTTGAATTCTCCTACTCAGAGAT < 41bp 0.911419334745609 0.598999550952005 0.31708992 0.26993912 prediction 0.624839567587207 Functional Loss - FOXJ2 ENSG00000065970 CDS Human protein_coding chr12:8197454 chr12:8197455 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6408 0 0 0 0 2 nucleoplasm 0.438714738202958 0.438604545276254 0 0 hPsi_site_11825 iPseU_CNN:0;iRNA_PseU:0 11826 chr15 80429825 80429825 1 + T G CHOL 80429824 + 80429804 80429844 41 GTATTACTCCATTTCCAGGGTTTGAATGCCGGTGTGGAAAT GTATTACTCCATTTCCAGGGTGTGAATGCCGGTGTGGAAAT < 41bp 0.815606759465433 0.503196614179027 0.21627271 0.20415851 prediction 0.624820290572812 Functional Loss - ZFAND6 ENSG00000086666 CDS Human protein_coding chr15:80429824 chr15:80429825 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6409 0 0 1 0 0 Cytosol 0.438718593206637 0.438494420293344 0 0 hPsi_site_11826 iPseU_CNN:0;iRNA_PseU:0 11827 chr6 26045648 26045648 1 + A G LUAD 26045647 + 26045627 26045667 41 CTCTCATTGCAAATGGCTCGTACGAAGCAAACAGCTCGCAA CTCTCATTGCAAATGGCTCGTGCGAAGCAAACAGCTCGCAA < 41bp 0.880628093868172 0.568229104064271 0.7578851 0.3226192 prediction 0.624797979607803 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045647 chr6:26045648 nonsynonymous SNV 0.576 0 22 hPsi_associated_SNPs_6410 0 0 0 0 0 exosome 0.437316206648097 0.438117776032447 0.5157702 0 hPsi_site_11827 iPseU_CNN:0.5157702;iRNA_PseU:0 11828 chr22 32498076 32498076 1 + A G SKCM 32498075 + 32498055 32498095 41 GTATGATTACTGAGTTTGCTTATGGAACCGGGAGCTGCATG GTATGATTACTGAGTTTGCTTGTGGAACCGGGAGCTGCATG < 41bp 0.81239028768729 0.388670752034693 0.34378678 0.25558376 prediction 0.62478057537458 Functional Loss - SLC5A1 ENSG00000100170 CDS Human protein_coding chr22:32498075 chr22:32498076 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_6411 0 0 0 0 1 Nucleus 0.438718559019757 0.438718484594846 0 0 hPsi_site_11828 iPseU_CNN:0;iRNA_PseU:0 11829 chr1 36394725 36394725 1 + A C rs11263839 36394724 + 36394704 36394744 41 ATGACCCTGCTCTGTACCCTTAAGAGCAGACTCAGTTGGGA ATGACCCTGCTCTGTACCCTTCAGAGCAGACTCAGTTGGGA < 41bp 0.825206952639676 0.512835077582283 0.6339662 0.48572218 prediction 0.624743750114787 Functional Loss - AGO1;AGO3 ENSG00000092847 UTR3 Human protein_coding chr1:36394724 chr1:36394725 . . 0 22 hPsi_associated_SNPs_6412 0 0 1 0 0 unknown 0.438720839434665 0.438724483714631 0.2679324 0 hPsi_site_11829 iPseU_CNN:0.2679324;iRNA_PseU:0 11830 chr4 186066362 186066362 1 + A C LUSC 186066361 + 186066341 186066381 41 GTCTCTGTCCAAGGCATCATTATCTATAGAGCTGCCTACTT GTCTCTGTCCAAGGCATCATTCTCTATAGAGCTGCCTACTT < 41bp 0.86959068480179 0.557228599116279 0.43167016 0.31477636 prediction 0.624724171371022 Functional Loss - SLC25A4 ENSG00000151729 CDS Human protein_coding chr4:186066361 chr4:186066362 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6413 0 0 1 2 0 Cytosol 0.438718595919744 0.438718703807728 0 0 hPsi_site_11830 iPseU_CNN:0;iRNA_PseU:0 11831 chr3 63645496 63645496 1 + A G rs199694342 63645495 + 63645475 63645515 41 GATGGTAAACTTGAAAAAGCTATTGCCAAAGATCTGCTGCA GATGGTAAACTTGAAAAAGCTGTTGCCAAAGATCTGCTGCA < 41bp 0.812354536173563 0.412203005395997 0.38973683 0.2553708 prediction 0.624709072347127 Functional Loss - SNTN ENSG00000188817 CDS Human protein_coding chr3:63645495 chr3:63645496 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_6414 0 0 0 0 2 unknown 0.438628202643414 0.438709303044564 0 0 hPsi_site_11831 iPseU_CNN:0;iRNA_PseU:0 11832 chr20 34618478 34618478 1 + A G STAD 34618477 + 34618457 34618497 41 ACGACTAAACCTCGTTATCCTATTTTTATGGCACCCCAGAA ACGACTAAACCTCGTTATCCTGTTTTTATGGCACCCCAGAA < 41bp 0.812328283748979 0.411661694185845 0.48310167 0.2494334 prediction 0.624656567497958 Functional Loss - CNBD2 ENSG00000149646 CDS Human protein_coding chr20:34618477 chr20:34618478 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_6415 0 0 0 0 0 exosome 0.438718593215539 0.438718592996067 0 0 hPsi_site_11832 iPseU_CNN:0;iRNA_PseU:0 11833 chr17 26861390 26861390 1 + A G UCEC 26861389 + 26861369 26861409 41 GAATTCTGTCCGGCACAACCTATCCCTCAACAAGTGCTTCG GAATTCTGTCCGGCACAACCTGTCCCTCAACAAGTGCTTCG < 41bp 0.812327633689467 0.378154362080046 0.26223007 0.20484844 prediction 0.624655267378935 Functional Loss - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26861389 chr17:26861390 synonymous SNV . 0 22 hPsi_associated_SNPs_6416 0 0 0 0 1 exosome 0.438717511461385 0.438707670924086 0 0 hPsi_site_11833 iPseU_CNN:0;iRNA_PseU:0 11834 chr6 17541324 17541324 1 + A G rs34206659 17541323 + 17541303 17541343 41 GTCCCACATCTCCTAAATCTTATCCTTCTCAAAAACATGCC GTCCCACATCTCCTAAATCTTGTCCTTCTCAAAAACATGCC < 41bp 0.812325461935035 0.394209356331264 0.4185194 0.27167797 prediction 0.62465092387007 Functional Loss - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17541323 chr6:17541324 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_6417 0 0 0 0 1 exosome 0.438721051460663 0.438720674379008 0 0 hPsi_site_11834 iPseU_CNN:0;iRNA_PseU:0 11835 chr11 5410768 5410768 1 + A G ESCA 5410767 + 5410747 5410787 41 TCATCCCCTTTTTCTTTATGTACATGGTTGCCATCTCAGGC TCATCCCCTTTTTCTTTATGTGCATGGTTGCCATCTCAGGC < 41bp 0.891564732043643 0.579260659332531 0.5770781 0.1924457 prediction 0.624608145422226 Functional Loss - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410767 chr11:5410768 nonsynonymous SNV 0.131 1 22 hPsi_associated_SNPs_6418 0 0 0 0 0 nucleoplasm 0.438718761735645 0.438718550297273 0.1541562 0 hPsi_site_11835 iPseU_CNN:0.1541562;iRNA_PseU:0 11836 chr3 42729785 42729785 1 + A G LUSC 42729784 + 42729764 42729804 41 GCCTGGACTCGGTCATGTGCTACGACAGGCTGTGAGCATGG GCCTGGACTCGGTCATGTGCTGCGACAGGCTGTGAGCATGG < 41bp 0.812303183329357 0.396304449917072 0.56571 0.34790182 prediction 0.624606366658713 Functional Loss - KLHL40 ENSG00000157119 CDS Human protein_coding chr3:42729784 chr3:42729785 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_6419 0 0 0 0 1 unknown 0.438728767272218 0.438308465353681 0.13142 0 hPsi_site_11836 iPseU_CNN:0.13142;iRNA_PseU:0 11837 chr9 111696822 111696822 1 + A G UCEC 111696821 + 111696801 111696841 41 TGCCTTCGCTCGTGGATCGATACTTCACTCGCTGGTACAAA TGCCTTCGCTCGTGGATCGATGCTTCACTCGCTGGTACAAA < 41bp 0.812291392095742 0.409506317150215 0.9627753 0.752481 prediction 0.624582784191483 Functional Loss - FAM206A ENSG00000119328 CDS Human protein_coding chr9:111696821 chr9:111696822 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_6420 0 0 1 0 1 Ribosome 0.43871859298097 0.438718592995078 0.4205886 0 hPsi_site_11837 iPseU_CNN:0.4205886;iRNA_PseU:0 11838 chr13 45964876 45964876 1 + A G rs545430168 45964875 + 45964855 45964895 41 CAAAGCCACAATTTCCTTCATATGTTCAAACTCTTCAGGAT CAAAGCCACAATTTCCTTCATGTGTTCAAACTCTTCAGGAT < 41bp 0.896233466055798 0.583943430962981 0.2325165 0.20235252 prediction 0.624580070185634 Functional Loss - TPT1-AS1 ENSG00000170919;ENSG00000214455 ncRNA_exonic Human other chr13:45964875 chr13:45964876 . . 0 22 hPsi_associated_SNPs_6421 0 0 0 1 0 unknown 0.43872345870787 0.438750753097242 0 0 hPsi_site_11838 iPseU_CNN:0;iRNA_PseU:0 11839 chr5 43644775 43644775 1 + A G CESC 43644774 + 43644754 43644794 41 GGCCACTCAGGCCAGCACCCTATATTCCAACAACATCACCA GGCCACTCAGGCCAGCACCCTGTATTCCAACAACATCACCA < 41bp 0.812285480778001 0.381999945721108 0.38821825 0.2838962 prediction 0.624570961556002 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43644774 chr5:43644775 synonymous SNV . 0 22 hPsi_associated_SNPs_6422 0 0 1 0 1 Endoplasmic reticulum 0.438714049022822 0.438693673736929 0 0 hPsi_site_11839 iPseU_CNN:0;iRNA_PseU:0 11840 chr2 105716202 105716202 1 + A C COAD 105716201 + 105716181 105716221 41 GAGGGAGCCCGCAGAAAGTTTACGTGGAAGAAACGCTAAGG GAGGGAGCCCGCAGAAAGTTTCCGTGGAAGAAACGCTAAGG < 41bp 0.875205944425382 0.562925385043712 0.8232968 0.30433115 prediction 0.62456111876334 Functional Loss - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105716201 chr2:105716202 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6423 0 0 1 0 1 Ribosome 0.438718394138804 0.438718592954992 0.6465936 0 hPsi_site_11840 iPseU_CNN:0.6465936;iRNA_PseU:0 11841 chr8 134233026 134233026 1 + A G SARC 134233025 + 134233005 134233045 41 CCACTGCTGTGAGCAGTGGGTATGTGAGGACGACGCCAAGA CCACTGCTGTGAGCAGTGGGTGTGTGAGGACGACGCCAAGA < 41bp 0.812269852847016 0.386458893925302 0.8623649 0.389107 prediction 0.624539705694033 Functional Loss - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134233025 chr8:134233026 synonymous SNV . 0 22 hPsi_associated_SNPs_6424 0 0 0 0 1 nucleus 0.439313406177253 0.438716867579919 0.7247298 0 hPsi_site_11841 iPseU_CNN:0.7247298;iRNA_PseU:0 11842 chr3 98002196 98002196 1 + A C BRCA 98002195 + 98002175 98002215 41 GCTGTTAGCCTTCTCATTTTTAGGTGGCTTCCTCCATGCCT GCTGTTAGCCTTCTCATTTTTCGGTGGCTTCCTCCATGCCT < 41bp 0.812256990679202 0.469226482241907 0.74594873 0.5852351 prediction 0.624513981358404 Functional Loss - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98002195 chr3:98002196 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_6425 0 0 0 0 0 unknown 0.438720959774975 0.438717132390032 0.32142726 0 hPsi_site_11842 iPseU_CNN:0.32142726;iRNA_PseU:0 11843 chrX 118145797 118145797 1 + A G LIHC 118145796 + 118145776 118145816 41 AGCCTTAATAAGAATGTGCCTATTTTCGTGTGTACTATGGC AGCCTTAATAAGAATGTGCCTGTTTTCGTGTGTACTATGGC < 41bp 0.812186718312892 0.393053660683869 0.30396456 0.25309294 prediction 0.624373436625784 Functional Loss - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118145796 chrX:118145797 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6426 0 0 1 0 1 chromatin 0.43872143421357 0.438718291542542 0 0 hPsi_site_11843 iPseU_CNN:0;iRNA_PseU:0 11844 chr1 36785817 36785817 1 + T G UCEC 36785816 + 36785796 36785836 41 CCCTGCAGAAGGTCAAGTACTTTGTAGCCAAAGAGGATCCA CCCTGCAGAAGGTCAAGTACTGTGTAGCCAAAGAGGATCCA < 41bp 0.822305106312962 0.510127386704267 0.33347392 0.29147807 prediction 0.62435543921739 Functional Loss - SH3D21 ENSG00000214193 CDS Human protein_coding chr1:36785816 chr1:36785817 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_6427 0 0 1 0 0 Nucleus 0.438719510014089 0.438742299884598 0 0 hPsi_site_11844 iPseU_CNN:0;iRNA_PseU:0 11845 chr5 10403613 10403613 1 + A G LUAD 10403612 + 10403592 10403632 41 ATTGGCTAGTGGGAATGGTATATGTCTTCTACTTTGCCTCC ATTGGCTAGTGGGAATGGTATGTGTCTTCTACTTTGCCTCC < 41bp 0.812169897383108 0.399433242999288 0.6532091 0.59019256 prediction 0.624339794766215 Functional Loss - MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10403612 chr5:10403613 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_6428 0 0 1 0 2 Nucleus 0.438718592995695 0.438718593034177 0.12603308 0 hPsi_site_11845 iPseU_CNN:0.12603308;iRNA_PseU:0 11846 chr7 35944220 35944220 1 + A C rs184897150 35944219 + 35944199 35944239 41 GTTCTGGTGGTTTGATTGTTTACAGGATATTCCAAAATAAA GTTCTGGTGGTTTGATTGTTTCCAGGATATTCCAAAATAAA < 41bp 0.849485900775166 0.537329722867216 0.69919497 0.3254685 prediction 0.6243123558159 Functional Loss - SEPT7 ENSG00000122545 UTR3 Human protein_coding chr7:35944219 chr7:35944220 . . 0 22 hPsi_associated_SNPs_6429 0 0 1 6 0 chromatin 0.438717092002375 0.43871593066547 0.39838994 0 hPsi_site_11846 iPseU_CNN:0.39838994;iRNA_PseU:0 11847 chr9 80943082 80943082 1 + A C LUSC 80943081 + 80943061 80943101 41 GATAAAGCTCTTGAACTCAATATGTTGTCCTTGAAAGGGCA GATAAAGCTCTTGAACTCAATCTGTTGTCCTTGAAAGGGCA < 41bp 0.812122886629509 0.454840312189215 0.27933535 0.28683382 prediction 0.624245773259018 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80943081 chr9:80943082 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6430 0 0 1 0 1 Ribosome 0.439591073151602 0.43872711230421 0 0 hPsi_site_11847 iPseU_CNN:0;iRNA_PseU:0 11848 chr17 51902034 51902034 1 + T C UCEC 51902035 - 51902015 51902055 41 TGGCCACGATGGTAGGGCCTTACATCTACATTTAATTTTTT TGGCCACGATGGTAGGGCCTTGCATCTACATTTAATTTTTT < 41bp 0.889907267159042 0.577788275601951 0.52187175 0.26617742 prediction 0.624237983114181 Functional Loss - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51902035 chr17:51902034 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_6431 0 0 0 0 0 exosome 0.43871776056533 0.438717920775749 0.0437434999999999 0 hPsi_site_11848 iPseU_CNN:0.0437434999999999;iRNA_PseU:0 11849 chr12 49314994 49314994 1 + A G rs4760600 49314993 + 49314973 49315013 41 TGGAGAATTTCTGGAAAAGGTACAACAAAGTGAAACTGGAG TGGAGAATTTCTGGAAAAGGTGCAACAAAGTGAAACTGGAG < 41bp 0.898803631187079 0.586700717424819 0.79262394 0.33277234 prediction 0.62420582752452 Functional Loss - CCDC65 ENSG00000139537 CDS Human protein_coding chr12:49314993 chr12:49314994 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6432 1 0 0 0 1 chromatin 0.438718592994555 0.438718592990023 0.58524788 0 hPsi_site_11849 iPseU_CNN:0.58524788;iRNA_PseU:0 11850 chr12 53776171 53776171 1 + A G UCEC 53776170 + 53776150 53776190 41 GCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCC GCACAGTCTCTGGTGGGCAGTGTGTTGTGGCTGCCGCTCCC < 41bp 0.812084158368956 0.378966922020645 0.5814377 0.40684998 prediction 0.624168316737913 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53776170 chr12:53776171 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6433 0 0 1 0 0 Nucleus 0.43890723999976 0.438885816367704 0.1628754 0 hPsi_site_11850 iPseU_CNN:0.1628754;iRNA_PseU:0 11851 chr8 66992654 66992654 1 + T G LUSC 66992653 + 66992633 66992673 41 CTCTTGACGGGCTGCTACTTTTGCTGCTGCCTGTGCTGCTG CTCTTGACGGGCTGCTACTTTGGCTGCTGCCTGTGCTGCTG < 41bp 0.836916607398685 0.524845263849391 0.36531243 0.20890504 prediction 0.624142687098587 Functional Loss - DNAJC5B ENSG00000147570 CDS Human protein_coding chr8:66992653 chr8:66992654 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6434 0 0 0 8 1 exosome 0.438718497899375 0.438718595518601 0 0 hPsi_site_11851 iPseU_CNN:0;iRNA_PseU:0 11852 chr6 139175232 139175232 1 + A G SKCM 139175231 + 139175211 139175251 41 TCTGGGAGAAATTAGGAAGCTATGTGGCCACTGAAGAAGAA TCTGGGAGAAATTAGGAAGCTGTGTGGCCACTGAAGAAGAA < 41bp 0.812065093112416 0.398028543543099 0.68873763 0.6064301 prediction 0.624130186224831 Functional Loss - ECT2L ENSG00000203734 CDS Human protein_coding chr6:139175231 chr6:139175232 nonsynonymous SNV 0.448 0 22 hPsi_associated_SNPs_6435 0 0 0 0 2 chromatin 0.438718588520019 0.438718033636253 0.16461506 0 hPsi_site_11852 iPseU_CNN:0.16461506;iRNA_PseU:0 11853 chr7 44240643 44240643 1 + A G rs570383516 44240642 + 44240622 44240662 41 GCCGGCTGCTGAGAGGCCGGTAGGCGGCGGCGGTCCCGAGG GCCGGCTGCTGAGAGGCCGGTGGGCGGCGGCGGTCCCGAGG < 41bp 0.857890863051075 0.545829716843377 0.827526 0.24422514 prediction 0.624122292415396 Functional Loss - YKT6 ENSG00000106636 UTR5 Human protein_coding chr7:44240642 chr7:44240643 . . 0 22 hPsi_associated_SNPs_6436 0 0 1 0 0 Ribosome 0.438718594871424 0.438713815715866 0.655052 0 hPsi_site_11853 iPseU_CNN:0.655052;iRNA_PseU:0 11854 chr19 58153212 58153212 1 + A G STAD 58153211 + 58153191 58153231 41 TCCACACAGGGGAAAGGCCTTATGTGTGTGGGGAATGTGGG TCCACACAGGGGAAAGGCCTTGTGTGTGTGGGGAATGTGGG < 41bp 0.902279897904078 0.590239087653457 0.33089706 0.27446708 prediction 0.624081620501242 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58153211 chr19:58153212 nonsynonymous SNV 0.978 3 22 hPsi_associated_SNPs_6437 0 0 0 0 0 cytosol 0.438718575222855 0.438718259667183 0 0 hPsi_site_11854 iPseU_CNN:0;iRNA_PseU:0 11855 chr5 137776703 137776703 1 + A G SKCM 137776702 + 137776682 137776722 41 AGTAACCATGCCTGCCTCCCTAGGCTCATCTTTGGCACCCT AGTAACCATGCCTGCCTCCCTGGGCTCATCTTTGGCACCCT < 41bp 0.822115982255937 0.510100777580514 0.64716697 0.2882292 prediction 0.624030409350846 Functional Loss - REEP2 ENSG00000132563 splicing Human protein_coding chr5:137776702 chr5:137776703 . 0.992 0 22 hPsi_associated_SNPs_6438 0 0 1 0 2 exosome 0.43871859874501 0.438718590343698 0.29433394 0 hPsi_site_11855 iPseU_CNN:0.29433394;iRNA_PseU:0 11856 chr4 89397091 89397091 1 + A G rs7699006 89397090 + 89397070 89397110 41 TTCCTTCTCCCAGAATGTCCTATGATGCATATTTCCAACAA TTCCTTCTCCCAGAATGTCCTGTGATGCATATTTCCAACAA < 41bp 0.81201095894941 0.39181217197922 0.29586065 0.2803085 prediction 0.62402191789882 Functional Loss - HERC5 ENSG00000138646 CDS Human protein_coding chr4:89397090 chr4:89397091 nonsynonymous SNV 0.402 0 22 hPsi_associated_SNPs_6439 0 0 0 0 2 exosome 0.438719002392634 0.438679328914931 0 0 hPsi_site_11856 iPseU_CNN:0;iRNA_PseU:0 11857 chr21 43720525 43720525 1 + A G rs1023156 43720524 + 43720504 43720544 41 GACACACACATACACACACATACACACACATACATGCACAC GACACACACATACACACACATGCACACACATACATGCACAC < 41bp 0.812007656595002 0.439208492472423 0.29986358 0.17855528 prediction 0.624015313190004 Functional Loss - ABCG1;TFF3 ENSG00000216197 upstream Human other chr21:43720524 chr21:43720525 . . 0 22 hPsi_associated_SNPs_6440 0 0 0 0 0 unknown 0.46271072344334 0.480217388843432 0 0 hPsi_site_11857 iPseU_CNN:0;iRNA_PseU:0 11858 chr1 55183278 55183278 1 + T G UCEC 55183277 + 55183257 55183297 41 AAGAAATGTGCAGATCCTGATTTGAATGCTGTCCTTTATAC AAGAAATGTGCAGATCCTGATGTGAATGCTGTCCTTTATAC < 41bp 0.846648412141706 0.53465341343601 0.57438684 0.43208066 prediction 0.623989997411393 Functional Loss - TTC4 ENSG00000243725 CDS Human protein_coding chr1:55183277 chr1:55183278 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6441 0 0 1 0 1 cytosol 0.44053279074399 0.440517958036535 0.14877368 0 hPsi_site_11858 iPseU_CNN:0.14877368;iRNA_PseU:0 11859 chr11 5776181 5776181 1 + A G KIRC 5776180 + 5776160 5776200 41 TTCTTGGCCATGCTTTCCTTTACTGACCTTGTTATGTGCTC TTCTTGGCCATGCTTTCCTTTGCTGACCTTGTTATGTGCTC < 41bp 0.811993298433103 0.402581445013128 0.4376993 0.32591102 prediction 0.623986596866206 Functional Loss - OR52N4 ENSG00000181074 CDS Human protein_coding chr11:5776180 chr11:5776181 nonsynonymous SNV 0.263 1 22 hPsi_associated_SNPs_6442 0 0 0 0 0 exosome 0.436344704776918 0.434690619978023 0 0 hPsi_site_11859 iPseU_CNN:0;iRNA_PseU:0 11860 chr7 24690139 24690139 1 + A G LIHC 24690138 + 24690118 24690158 41 GGTTGAAAATAATGATCTGGTAATTGCCCGAATCCTCCATG GGTTGAAAATAATGATCTGGTGATTGCCCGAATCCTCCATG < 41bp 0.811965509666313 0.399957051785677 0.6289744 0.22993594 prediction 0.623931019332626 Functional Loss - MPP6 ENSG00000105926 CDS Human protein_coding chr7:24690138 chr7:24690139 synonymous SNV . 0 22 hPsi_associated_SNPs_6443 0 0 1 0 0 Cytosol 0.438681728666906 0.438751506825696 0.2579488 0 hPsi_site_11860 iPseU_CNN:0.2579488;iRNA_PseU:0 11861 chr2 191231605 191231605 1 + T G UCEC 191231604 + 191231584 191231624 41 TCCACAGGACATTTTGGGAATTTGGGTGGACCCCATAGGTA TCCACAGGACATTTTGGGAATGTGGGTGGACCCCATAGGTA < 41bp 0.811949565577664 0.47664285233712 0.61420953 0.31539893 prediction 0.623899131155328 Functional Loss - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191231604 chr2:191231605 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_6444 0 0 0 0 1 exosome 0.438718592995098 0.438718592995101 0.22841906 0 hPsi_site_11861 iPseU_CNN:0.22841906;iRNA_PseU:0 11862 chr11 5905923 5905923 1 + A G UCEC 5905922 + 5905902 5905942 41 CCATCTGCAACCCTCTCCAGTACACCATGATCCTCACCAAT CCATCTGCAACCCTCTCCAGTGCACCATGATCCTCACCAAT < 41bp 0.811937888469734 0.405616770973408 0.5237145 0.29061657 prediction 0.623875776939468 Functional Loss - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5905922 chr11:5905923 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_6445 0 0 0 0 0 unknown 0.438087573918819 0.437900034875662 0.0474289999999999 0 hPsi_site_11862 iPseU_CNN:0.0474289999999999;iRNA_PseU:0 11863 chr10 71255399 71255399 1 + A G OV 71255398 + 71255378 71255418 41 GAAGAGGAATTGAGAACTACTATGATGATCTGGACTTCAAA GAAGAGGAATTGAGAACTACTGTGATGATCTGGACTTCAAA < 41bp 0.811906064780497 0.401411132676857 0.26872337 0.2359949 prediction 0.623812129560995 Functional Loss - TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71255398 chr10:71255399 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6446 0 0 1 0 2 Cytosol 0.438787186783708 0.439362674433526 0 0 hPsi_site_11863 iPseU_CNN:0;iRNA_PseU:0 11864 chr3 193854182 193854182 1 + A C UCEC 193854181 + 193854161 193854201 41 AAAAGGAAAATGCCAGCTGATATAATGGAGAAAAATTCCTC AAAAGGAAAATGCCAGCTGATCTAATGGAGAAAAATTCCTC < 41bp 0.811898777866573 0.459492256400505 0.5882577 0.31174606 prediction 0.623797555733146 Functional Loss - HES1 ENSG00000114315 CDS Human protein_coding chr3:193854181 chr3:193854182 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6447 0 0 1 0 1 Cytosol 0.438717882200638 0.438718593016751 0.1765154 0 hPsi_site_11864 iPseU_CNN:0.1765154;iRNA_PseU:0 11865 chr11 123810502 123810502 1 + A G rs149721746 123810501 + 123810481 123810521 41 CACACCTGCACACAACCATGTATTTTCTCTTGGGCAATCTT CACACCTGCACACAACCATGTGTTTTCTCTTGGGCAATCTT < 41bp 0.897727016764034 0.585837270688793 0.5029982 0.28867915 prediction 0.623779492150482 Functional Loss - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123810501 chr11:123810502 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6448 0 0 0 0 0 exosome 0.438718886446473 0.438730800550022 0.0059963999999999 0 hPsi_site_11865 iPseU_CNN:0.0059963999999999;iRNA_PseU:0 11866 chr2 132021400 132021400 1 + A G LUAD 132021399 + 132021379 132021419 41 AGATCTGGCACCACACCTTCTACAACGAGCTGCGTGTGGCT AGATCTGGCACCACACCTTCTGCAACGAGCTGCGTGTGGCT < 41bp 0.811881087210627 0.402290076587274 0.6415057 0.35782993 prediction 0.623762174421253 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021399 chr2:132021400 nonsynonymous SNV 0.116 2 22 hPsi_associated_SNPs_6449 0 0 1 0 0 chromatin 0.438718586056807 0.438718767256313 0.2830114 0 hPsi_site_11866 iPseU_CNN:0.2830114;iRNA_PseU:0 11867 chr7 142637469 142637469 1 + T G COAD 142637468 + 142637448 142637488 41 AAGAACAGTTCGAAGAGCACTTTGTGGCCTCCTCAGTGGGT AAGAACAGTTCGAAGAGCACTGTGTGGCCTCCTCAGTGGGT < 41bp 0.811853984321449 0.489850713389001 0.6821052 0.47875312 prediction 0.623707968642899 Functional Loss - C7orf34 ENSG00000165131 CDS Human protein_coding chr7:142637468 chr7:142637469 nonsynonymous SNV 0.965 4 22 hPsi_associated_SNPs_6450 0 0 0 0 1 exosome 0.438717658034961 0.438762568261755 0.3642104 0 hPsi_site_11867 iPseU_CNN:0.3642104;iRNA_PseU:0 11868 chr12 57906639 57906639 1 + A G STAD 57906638 + 57906618 57906658 41 CTGCTGACATCTGGCGCTTCTATCTGCTGTACATTCGGCCT CTGCTGACATCTGGCGCTTCTGTCTGCTGTACATTCGGCCT < 41bp 0.811844666404088 0.392240695426415 0.29578537 0.21545357 prediction 0.623689332808176 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57906638 chr12:57906639 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6451 0 0 1 0 0 Cytosol 0.438667230985861 0.438453956455804 0 0 hPsi_site_11868 iPseU_CNN:0;iRNA_PseU:0 11869 chr3 148889972 148889972 1 + A G HNSC 148889971 + 148889951 148889991 41 CTGCAACATTTTTCTTGCCATATCTTCTCTATTGCAGTCGA CTGCAACATTTTTCTTGCCATGTCTTCTCTATTGCAGTCGA < 41bp 0.811833347737081 0.422940005915459 0.42041302 0.27420527 prediction 0.623666695474162 Functional Loss - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148889971 chr3:148889972 nonsynonymous SNV 0.894 4 22 hPsi_associated_SNPs_6452 0 0 1 0 1 Ribosome 0.421818634562148 0.43261265298821 0 0 hPsi_site_11869 iPseU_CNN:0;iRNA_PseU:0 11870 chr17 34959070 34959070 1 + T G UCS 34959069 + 34959049 34959089 41 ACTGATGACCTCACCGGATTTTTACAGGTAATGAGGGGCAA ACTGATGACCTCACCGGATTTGTACAGGTAATGAGGGGCAA < 41bp 0.811793355110307 0.488203974629092 0.18878844 0.16333383 prediction 0.623586710220614 Functional Loss - MRM1 ENSG00000129282 CDS Human other chr17:34959069 chr17:34959070 nonsynonymous SNV 0.936 0 22 hPsi_associated_SNPs_6453 0 0 1 0 2 nucleolus 0.438618563772897 0.438675314190903 0 0 hPsi_site_11870 iPseU_CNN:0;iRNA_PseU:0 11871 chr14 88478157 88478157 1 + A G UCEC 88478156 + 88478136 88478176 41 ACAAAGACAAAGAAAACGCATACTTTCTGTGTCTACAAAAG ACAAAGACAAAGAAAACGCATGCTTTCTGTGTCTACAAAAG < 41bp 0.811792352570372 0.4177499446379 0.30847722 0.27008444 prediction 0.623584705140744 Functional Loss - GPR65 ENSG00000140030 CDS Human protein_coding chr14:88478156 chr14:88478157 nonsynonymous SNV 0.358 0 22 hPsi_associated_SNPs_6454 0 0 0 0 0 exosome 0.440880170658812 0.43904404371474 0 0 hPsi_site_11871 iPseU_CNN:0;iRNA_PseU:0 11872 chr15 52192396 52192396 1 + A G LUSC 52192395 + 52192375 52192415 41 GAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTA GAACAAAACTTTGAAGAGCTTGAATGTGGAGTCCAACTTTA < 41bp 0.811781925023962 0.395588923807029 0.2823571 0.2613446 prediction 0.623563850047923 Functional Loss - TMOD3 ENSG00000138594 CDS Human protein_coding chr15:52192395 chr15:52192396 synonymous SNV . 0 22 hPsi_associated_SNPs_6455 0 0 1 0 2 Cytosol 0.438788236427418 0.43871870256602 0 0 hPsi_site_11872 iPseU_CNN:0;iRNA_PseU:0 11873 chr7 66273946 66273946 1 + A G BLCA 66273945 + 66273925 66273965 41 GTCAGGAGGATTTTGATCGCTACATGTCTGGCCAGACCTCT GTCAGGAGGATTTTGATCGCTGCATGTCTGGCCAGACCTCT < 41bp 0.904223797905437 0.592447908610492 0.7350987 0.32703084 prediction 0.62355177858989 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66273945 chr7:66273946 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_6456 0 0 1 0 1 Cytosol 0.438718044594686 0.438718451191457 0.4701974 0 hPsi_site_11873 iPseU_CNN:0.4701974;iRNA_PseU:0 11874 chr4 177248398 177248398 1 + A G UCEC 177248397 + 177248377 177248417 41 TGAAAGATATGAAAACAAAATATTTTTTCTTTGACGATGGA TGAAAGATATGAAAACAAAATGTTTTTTCTTTGACGATGGA < 41bp 0.811760979015224 0.416541217148095 0.26807153 0.24788922 prediction 0.623521958030447 Functional Loss - SPCS3 ENSG00000129128 CDS Human protein_coding chr4:177248397 chr4:177248398 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6457 0 0 1 0 2 Ribosome 0.440188112929654 0.438153441755687 0 0 hPsi_site_11874 iPseU_CNN:0;iRNA_PseU:0 11875 chr15 96877406 96877406 1 + A C UCEC 96877405 + 96877385 96877425 41 CACTCGTACCTGTCCGGATATATTTCCCTGCTGTTGCGCGC CACTCGTACCTGTCCGGATATCTTTCCCTGCTGTTGCGCGC < 41bp 0.880120656887092 0.56838098017318 0.51671016 0.517497 prediction 0.623479353427824 Functional Loss - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877405 chr15:96877406 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6458 0 0 1 0 0 Cytoplasm 0.438725249989693 0.438718608322541 0 0 hPsi_site_11875 iPseU_CNN:0;iRNA_PseU:0 11876 chr8 87479058 87479058 1 + A G UCEC 87479057 + 87479037 87479077 41 ATCTACCACCATATAAGAGTTATGAACAACTAAAGGAAAAA ATCTACCACCATATAAGAGTTGTGAACAACTAAAGGAAAAA < 41bp 0.887323462339808 0.575591424611952 0.40899163 0.30038345 prediction 0.623464075455711 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87479057 chr8:87479058 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6459 0 0 0 0 1 Cytosol 0.43871885638961 0.438718649028099 0 0 hPsi_site_11876 iPseU_CNN:0;iRNA_PseU:0 11877 chr17 79605944 79605944 1 + A G rs577712823 79605943 + 79605923 79605963 41 TAAACCATAATTTCTAATCTTATGGCTAATTTGTTAGTCCT TAAACCATAATTTCTAATCTTGTGGCTAATTTGTTAGTCCT < 41bp 0.811713045586944 0.448135112184342 0.27009225 0.26860428 prediction 0.623426091173888 Functional Loss - TSPAN10 ENSG00000182446;ENSG00000182612 intergenic Human other chr17:79605943 chr17:79605944 . . 0 22 hPsi_associated_SNPs_6460 0 0 0 0 0 nucleoplasm 0.438702544147444 0.438718465094423 0 0 hPsi_site_11877 iPseU_CNN:0;iRNA_PseU:0 11878 chr3 39452577 39452577 1 + A G rs188790952 39452576 + 39452556 39452596 41 TTAGAGCTTGGAGTTGAGGCTACTGACTGGCCGATGAACTC TTAGAGCTTGGAGTTGAGGCTGCTGACTGGCCGATGAACTC < 41bp 0.811661865743727 0.467907668217146 0.27567288 0.18576881 prediction 0.623323731487454 Functional Loss - SNORA62 ENSG00000202363 ncRNA_exonic Human snoRNA chr3:39452576 chr3:39452577 . . 0 22 hPsi_associated_SNPs_6461 0 0 1 0 0 unknown 0.438405790552169 0.438425006556498 0 0 hPsi_site_11878 iPseU_CNN:0;iRNA_PseU:0 11879 chr7 143747702 143747702 1 + A G LUAD 143747701 + 143747681 143747721 41 TCACACCTGGCCATCATTGATATTTCGTATGCTTCCAACAA TCACACCTGGCCATCATTGATGTTTCGTATGCTTCCAACAA < 41bp 0.890157153220533 0.578497618128928 0.52441555 0.41336346 prediction 0.623319070183212 Functional Loss - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143747701 chr7:143747702 nonsynonymous SNV 0.730 0 22 hPsi_associated_SNPs_6462 0 0 0 0 0 unknown 0.438718583872817 0.438715268568446 0.0488310999999999 0 hPsi_site_11879 iPseU_CNN:0.0488310999999999;iRNA_PseU:0 11880 chr19 33465034 33465034 1 + A G rs146829849 33465033 + 33465013 33465053 41 TGAACAATACTTCCCAGCCCTACAGAAGTTTACTGTGCTGG TGAACAATACTTCCCAGCCCTGCAGAAGTTTACTGTGCTGG < 41bp 0.811652123793418 0.383451411607328 0.32362467 0.22724763 prediction 0.623304247586835 Functional Loss - FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465033 chr19:33465034 synonymous SNV . 0 22 hPsi_associated_SNPs_6463 0 0 1 0 2 cytosol 0.43871859862585 0.438718593590262 0 0 hPsi_site_11880 iPseU_CNN:0;iRNA_PseU:0 11881 chr12 29460654 29460654 1 + T G UCEC 29460653 + 29460633 29460673 41 GATCAGAGATTGGCCCAATATTTATACCTACACCAAGGCCT GATCAGAGATTGGCCCAATATGTATACCTACACCAAGGCCT < 41bp 0.857468338672304 0.54582534343717 0.5254757 0.43506768 prediction 0.623285990470269 Functional Loss - FAR2 ENSG00000064763 CDS Human protein_coding chr12:29460653 chr12:29460654 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_6464 0 0 1 0 1 Cytosol 0.441260340835316 0.442043792325216 0.0509514 0 hPsi_site_11881 iPseU_CNN:0.0509514;iRNA_PseU:0 11882 chr12 54394044 54394044 1 + A G LIHC 54394043 + 54394023 54394063 41 TCACGACAATGAAGACCTCCTAGCGTCCAGGTTTCCGGCCA TCACGACAATGAAGACCTCCTGGCGTCCAGGTTTCCGGCCA < 41bp 0.900591260923099 0.588951337317709 0.35952973 0.27022275 prediction 0.623279847210782 Functional Loss - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394043 chr12:54394044 synonymous SNV . 0 22 hPsi_associated_SNPs_6465 0 0 1 0 0 chromatin 0.438717448355971 0.438279052474199 0 0 hPsi_site_11882 iPseU_CNN:0;iRNA_PseU:0 11883 chr20 5935832 5935832 1 + A G rs116926921 5935831 + 5935811 5935851 41 GTAACTAACTTGATACCAGATATAGCAACTGAACTAAGAGA GTAACTAACTTGATACCAGATGTAGCAACTGAACTAAGAGA < 41bp 0.811631175897342 0.427073877417222 0.24084294 0.19820786 prediction 0.623262351794684 Functional Loss - MCM8 ENSG00000125885 CDS Human protein_coding chr20:5935831 chr20:5935832 nonsynonymous SNV 0.748 0 22 hPsi_associated_SNPs_6466 0 0 1 0 2 Ribosome 0.439552525477898 0.438987208007716 0 0 hPsi_site_11883 iPseU_CNN:0;iRNA_PseU:0 11884 chr7 39612281 39612281 1 + A G COAD 39612280 + 39612260 39612300 41 GCTGGGCCTATCAGTAGATGTATTACAACACCTCAAACAAC GCTGGGCCTATCAGTAGATGTGTTACAACACCTCAAACAAC < 41bp 0.811628359302662 0.42006111072892 0.33620834 0.27632022 prediction 0.623256718605324 Functional Loss - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39612280 chr7:39612281 synonymous SNV . 0 22 hPsi_associated_SNPs_6467 0 0 1 0 0 Ribosome 0.438156381694861 0.438632805755849 0 0 hPsi_site_11884 iPseU_CNN:0;iRNA_PseU:0 11885 chr9 37089135 37089135 1 + A G rs16933896 37089134 + 37089114 37089154 41 GGAGTGACTTGTAATTCTCATATGTTAGAAAGGCAGATCTC GGAGTGACTTGTAATTCTCATGTGTTAGAAAGGCAGATCTC < 41bp 0.811624620007265 0.431051964688611 0.41929007 0.33866203 prediction 0.623249240014531 Functional Loss - EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37089134 chr9:37089135 . . 0 22 hPsi_associated_SNPs_6468 0 0 1 0 0 unknown 0.438718574354246 0.438718435766713 0 0 hPsi_site_11885 iPseU_CNN:0;iRNA_PseU:0 11886 chr3 129251135 129251135 1 + A G UCEC 129251134 + 129251114 129251154 41 AGTGCTCGTGTGGAATCGACTACTACACGCTCAAGCCGGAG AGTGCTCGTGTGGAATCGACTGCTACACGCTCAAGCCGGAG < 41bp 0.811605605153925 0.398630758592048 0.6607201 0.22536865 prediction 0.62321121030785 Functional Loss - RHO ENSG00000163914 CDS Human protein_coding chr3:129251134 chr3:129251135 nonsynonymous SNV 0.968 4 22 hPsi_associated_SNPs_6469 0 0 0 0 1 Cytosol 0.438772972389945 0.438724093748286 0.3214402 0 hPsi_site_11886 iPseU_CNN:0.3214402;iRNA_PseU:0 11887 chr22 24124560 24124560 1 + A G COAD 24124559 + 24124539 24124579 41 ACTTCTTCCGAGGCAGGGACTACTGGCGTTTCCACCCCAGC ACTTCTTCCGAGGCAGGGACTGCTGGCGTTTCCACCCCAGC < 41bp 0.811590578743918 0.379155094376073 0.33171773 0.25407517 prediction 0.623181157487836 Functional Loss - MMP11 ENSG00000099953;ENSG00000267954 CDS Human other chr22:24124559 chr22:24124560 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6470 0 0 1 0 1 Endoplasmic reticulum 0.438719730556368 0.438675480225795 0 0 hPsi_site_11887 iPseU_CNN:0;iRNA_PseU:0 11888 chr19 55704458 55704458 1 + A G rs10414438 55704457 + 55704437 55704477 41 AAAAACAAAAGTTAGCTGGGTATGGTGGTGCACACCTGTCA AAAAACAAAAGTTAGCTGGGTGTGGTGGTGCACACCTGTCA < 41bp 0.811563847728202 0.454366954224196 0.61468476 0.3605933 prediction 0.623127695456405 Functional Loss - PTPRH ENSG00000080031 intronic Human protein_coding chr19:55704457 chr19:55704458 . . 0 22 hPsi_associated_SNPs_6471 0 0 0 0 0 chromatin 0.439018262566074 0.438452556987089 0.22936952 0 hPsi_site_11888 iPseU_CNN:0.22936952;iRNA_PseU:0 11889 chr2 219269555 219269555 1 + A G rs146891368 219269554 + 219269534 219269574 41 TGGACATCAAGTGCCTTGCATAGAGCCCCCTCTTCCCCGCC TGGACATCAAGTGCCTTGCATGGAGCCCCCTCTTCCCCGCC < 41bp 0.88264114968958 0.571082723257591 0.7218916 0.36679524 prediction 0.623116852863979 Functional Loss - CTDSP1 ENSG00000144579 UTR3 Human protein_coding chr2:219269554 chr2:219269555 . . 0 22 hPsi_associated_SNPs_6472 0 0 1 0 0 Cytosol 0.438718588150942 0.438718592921162 0.4437832 0 hPsi_site_11889 iPseU_CNN:0.4437832;iRNA_PseU:0 11890 chr17 7188156 7188156 1 + T G UCEC 7188155 + 7188135 7188175 41 TCTTCTCCCCCACCTCTAGGTTTTCTATTATTCGACCAGCA TCTTCTCCCCCACCTCTAGGTGTTCTATTATTCGACCAGCA < 41bp 0.811557226391204 0.492017530283005 0.32043704 0.33420676 prediction 0.623114452782408 Functional Loss - SLC2A4 ENSG00000181856 CDS Human protein_coding chr17:7188155 chr17:7188156 synonymous SNV . 0 22 hPsi_associated_SNPs_6473 0 0 1 0 1 Nucleus 0.438718594517973 0.438718592995103 0 0 hPsi_site_11890 iPseU_CNN:0;iRNA_PseU:0 11891 chr2 3464076 3464076 1 + A G UCEC 3464075 + 3464055 3464095 41 CACGTCTGGGCCGGGTGATGTACTCCATGGCAAACTGTCTG CACGTCTGGGCCGGGTGATGTGCTCCATGGCAAACTGTCTG < 41bp 0.811556677304099 0.378944711209445 0.6528852 0.29619062 prediction 0.623113354608198 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3464075 chr2:3464076 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_6474 0 0 1 0 3 Ribosome 0.438753915158831 0.438692960467016 0.3057704 0 hPsi_site_11891 iPseU_CNN:0.3057704;iRNA_PseU:0 11892 chr12 129190691 129190691 1 + A G rs144227199 129190690 + 129190670 129190710 41 AAGGTGAAATTTACCACCTTTACCACCATCCCCCCGGACGA AAGGTGAAATTTACCACCTTTGCCACCATCCCCCCGGACGA < 41bp 0.811529556914839 0.411595629860476 0.71806765 0.42502344 prediction 0.623059113829678 Functional Loss - TMEM132C ENSG00000181234 CDS Human protein_coding chr12:129190690 chr12:129190691 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_6475 0 0 0 0 0 exosome 0.43871859291517 0.438718590427909 0.4361353 0 hPsi_site_11892 iPseU_CNN:0.4361353;iRNA_PseU:0 11893 chr12 6965248 6965248 1 + T G UCEC 6965247 + 6965227 6965267 41 CGAGGATGTGAAGATTGTCATTTTGCCAGATTACCTGGAGA CGAGGATGTGAAGATTGTCATGTTGCCAGATTACCTGGAGA < 41bp 0.811508961348152 0.472307985209605 0.32488245 0.28001395 prediction 0.623017922696304 Functional Loss - USP5 ENSG00000111667 CDS Human protein_coding chr12:6965247 chr12:6965248 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6476 0 0 1 0 2 Nucleus 0.438718606378322 0.438718568817989 0 0 hPsi_site_11893 iPseU_CNN:0;iRNA_PseU:0 11894 chr3 56653354 56653354 1 + A G GBM 56653353 + 56653333 56653373 41 AGAACCCAACAAACTCAAAATACATTACATTTACCACTAAA AGAACCCAACAAACTCAAAATGCATTACATTTACCACTAAA < 41bp 0.81148535726869 0.417180369482388 0.5251491 0.45138085 prediction 0.62297071453738 Functional Loss - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56653353 chr3:56653354 nonsynonymous SNV 0.083 0 22 hPsi_associated_SNPs_6477 0 0 1 0 1 chromatin 0.438737088050882 0.438803388399716 0.0502982000000001 0 hPsi_site_11894 iPseU_CNN:0.0502982000000001;iRNA_PseU:0 11895 chr15 25476007 25476007 1 + A G UCEC 25476006 + 25475986 25476026 41 GGTCAATGATGAGAACCGTATATTGTCCTGAAGAGCGGTGA GGTCAATGATGAGAACCGTATGTTGTCCTGAAGAGCGGTGA < 41bp 0.811472026902155 0.457485489954743 0.42315716 0.33548498 prediction 0.622944053804309 Functional Loss - SNORD115-33 ENSG00000200593 ncRNA_exonic Human snoRNA chr15:25476006 chr15:25476007 . . 0 22 hPsi_associated_SNPs_6478 0 0 1 0 0 unknown 0.438744527737838 0.439947346122112 0 0 hPsi_site_11895 iPseU_CNN:0;iRNA_PseU:0 11896 chr11 6265281 6265281 1 + A G LUSC 6265280 + 6265260 6265300 41 TGCGGGAGGTGCTGAGCGAGTATCCACAAGCACAGACCATC TGCGGGAGGTGCTGAGCGAGTGTCCACAAGCACAGACCATC < 41bp 0.811446522031221 0.441068157295784 0.68555796 0.2551607 prediction 0.622893044062442 Functional Loss - CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6265280 chr11:6265281 nonsynonymous SNV 0.989 5 22 hPsi_associated_SNPs_6479 0 0 0 1 0 exosome 0.438633397769575 0.438611768690215 0.37111592 0 hPsi_site_11896 iPseU_CNN:0.37111592;iRNA_PseU:0 11897 chr19 59095038 59095038 1 + A G rs556997402 59095037 + 59095017 59095057 41 GCCCTGCCAGGAAGCCTCTATATGAGCCTACCTCCCTCCTG GCCCTGCCAGGAAGCCTCTATGTGAGCCTACCTCCCTCCTG < 41bp 0.811446274850531 0.438697099079028 0.67077726 0.4029038 prediction 0.622892549701062 Functional Loss - CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59095037 chr19:59095038 . . 0 22 hPsi_associated_SNPs_6480 0 0 1 0 0 unknown 0.438718591734811 0.438718584276955 0.34155452 0 hPsi_site_11897 iPseU_CNN:0.34155452;iRNA_PseU:0 11898 chr1 248569674 248569674 1 + A G rs41269351 248569673 + 248569653 248569693 41 GACATGATGTATATTTCCACTATTGTGCCTAAGATGCTGGT GACATGATGTATATTTCCACTGTTGTGCCTAAGATGCTGGT < 41bp 0.811443667550806 0.417778428389196 0.32426268 0.2469897 prediction 0.622887335101613 Functional Loss - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248569673 chr1:248569674 nonsynonymous SNV 0.125 0 22 hPsi_associated_SNPs_6481 0 0 0 0 0 unknown 0.439252718161209 0.439607636297433 0 0 hPsi_site_11898 iPseU_CNN:0;iRNA_PseU:0 Cognitive function 11899 chr15 25330556 25330556 1 + A G OV 25330555 + 25330535 25330575 41 TCGATGATGACTTCCTTATATACATTCCTTGGAAAGCTGAA TCGATGATGACTTCCTTATATGCATTCCTTGGAAAGCTGAA < 41bp 0.811383403588462 0.444672259076872 0.7984934 0.6145164 prediction 0.622766807176923 Functional Loss - SNORD116-18 ENSG00000206688 ncRNA_exonic Human snoRNA chr15:25330555 chr15:25330556 . . 0 22 hPsi_associated_SNPs_6482 0 0 0 3 0 unknown 0.424343662389373 0.433893781788505 0.367954 0 hPsi_site_11899 iPseU_CNN:0.367954;iRNA_PseU:0 11900 chr13 32340136 32340136 1 + T G BRCA 32340135 + 32340115 32340155 41 CACAGTCTTCCAGATAAAGTTTTCATCAAATACACAAAACT CACAGTCTTCCAGATAAAGTTGTCATCAAATACACAAAACT < 41bp 0.811350851886331 0.499711635838877 0.5540977 0.29557186 prediction 0.622701703772663 Functional Loss - RXFP2 ENSG00000133105 CDS Human protein_coding chr13:32340135 chr13:32340136 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6483 0 0 0 0 2 exosome 0.445846061876342 0.438214233579695 0.1081954 0 hPsi_site_11900 iPseU_CNN:0.1081954;iRNA_PseU:0 11901 chr1 112305608 112305608 1 + A G LUAD 112305607 + 112305587 112305627 41 AGAATTGCCCAGAAATGTAATATCAACCTTCTCCCTTTACC AGAATTGCCCAGAAATGTAATGTCAACCTTCTCCCTTTACC < 41bp 0.811327974105824 0.417384865720193 0.5868841 0.48148906 prediction 0.622655948211648 Functional Loss - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112305607 chr1:112305608 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_6484 0 0 1 0 2 Ribosome 0.438718683383466 0.438716819739449 0.1737682 0 hPsi_site_11901 iPseU_CNN:0.1737682;iRNA_PseU:0 Multiple complex diseases 11902 chr10 47087854 47087854 1 + A G UCEC 47087853 + 47087833 47087873 41 GCATCTGCCCCTGTCCACAGTACATACGGAAGTCTCCAAAG GCATCTGCCCCTGTCCACAGTGCATACGGAAGTCTCCAAAG < 41bp 0.907033004290138 0.595713977928158 0.32367116 0.3567919 prediction 0.62263805272396 Functional Loss - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087853 chr10:47087854 synonymous SNV . 0 22 hPsi_associated_SNPs_6485 0 0 0 0 0 unknown 0.438725170536268 0.438729860407488 0 0 hPsi_site_11902 iPseU_CNN:0;iRNA_PseU:0 11903 chr11 64974118 64974118 1 + T G KIRP 64974117 + 64974097 64974137 41 AGGGCGACTTCGTGCTGCGCTTCTTCTCAGAGAAGAGTGCT AGGGCGACTTCGTGCTGCGCTGCTTCTCAGAGAAGAGTGCT < 41bp 0.811305763161287 0.468724475481763 0.34478146 0.18773374 prediction 0.622611526322574 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64974117 chr11:64974118 nonsynonymous SNV 0.982 3 22 hPsi_associated_SNPs_6486 0 0 1 0 1 Ribosome 0.438718753375797 0.43874430642049 0 0 hPsi_site_11903 iPseU_CNN:0;iRNA_PseU:0 11904 chr17 4713204 4713204 1 + A G LUAD 4713203 + 4713183 4713223 41 TGAAGGACTCCTTCCTGCTGTACATGTGCCTCGAGACAGGT TGAAGGACTCCTTCCTGCTGTGCATGTGCCTCGAGACAGGT < 41bp 0.915210329158411 0.603910114921394 0.31732827 0.19719309 prediction 0.622600428474036 Functional Loss - PLD2 ENSG00000129219 CDS Human protein_coding chr17:4713203 chr17:4713204 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6487 0 0 1 0 1 Cytosol 0.438602328210419 0.438706792053288 0 0 hPsi_site_11904 iPseU_CNN:0;iRNA_PseU:0 11905 chr9 108536217 108536217 1 + A G rs144364513 108536216 + 108536196 108536236 41 GGATACATTGAGTTGGATGCTATTTGGCTGGCAGCAGCCGT GGATACATTGAGTTGGATGCTGTTTGGCTGGCAGCAGCCGT < 41bp 0.811293728174684 0.4112212930508 0.42189485 0.268582 prediction 0.622587456349369 Functional Loss - TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108536216 chr9:108536217 synonymous SNV . 0 22 hPsi_associated_SNPs_6488 0 0 1 0 1 Ribosome 0.438718778405503 0.438718112373989 0 0 hPsi_site_11905 iPseU_CNN:0;iRNA_PseU:0 11906 chr3 37090074 37090074 1 + A G rs55907433 37090073 + 37090053 37090093 41 CCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGACTAGC CCCCCTTTGGAGGGACTGCCTGTCTTCATTCTTCGACTAGC < 41bp 0.811264489211399 0.443122048275232 0.4595668 0.24959424 prediction 0.622528978422799 Functional Loss - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37090073 chr3:37090074 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6489 5 0 1 0 2 Cytosol 0.438683307791765 0.438714617318087 0 0 hPsi_site_11906 iPseU_CNN:0;iRNA_PseU:0 11907 chr8 95854621 95854621 1 + A G LUSC 95854620 + 95854600 95854640 41 TTTAAAGTTTGTGCCTGTAATACAGTCCGTGATATACTGGA TTTAAAGTTTGTGCCTGTAATGCAGTCCGTGATATACTGGA < 41bp 0.811255005873946 0.412691585534701 0.305205 0.2855157 prediction 0.622510011747893 Functional Loss - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95854620 chr8:95854621 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6490 0 0 1 0 2 Nucleus 0.439039127902234 0.439154616514311 0 0 hPsi_site_11907 iPseU_CNN:0;iRNA_PseU:0 11908 chr17 79640219 79640219 1 + A G rs1137360 79640218 + 79640198 79640238 41 GCCAGCTGTGAGTGGTCCCCTACAGAGGCTGCCCACCCAAG GCCAGCTGTGAGTGGTCCCCTGCAGAGGCTGCCCACCCAAG < 41bp 0.811253870074069 0.466878933119868 0.4487502 0.337525 prediction 0.622507740148139 Functional Loss - CCDC137 ENSG00000185298 UTR3 Human protein_coding chr17:79640218 chr17:79640219 . . 0 22 hPsi_associated_SNPs_6491 0 0 0 1 0 Ribosome 0.438718821298203 0.438718388313469 0 0 hPsi_site_11908 iPseU_CNN:0;iRNA_PseU:0 11909 chr1 161069226 161069226 1 + A G rs142312611 161069225 + 161069205 161069245 41 ACCCCATCCAGGTCATCAGCTATTGCTCTTTGGAGGTTGCA ACCCCATCCAGGTCATCAGCTGTTGCTCTTTGGAGGTTGCA < 41bp 0.914930033460677 0.603709755981467 0.36204392 0.31914014 prediction 0.62244055495842 Functional Loss - KLHDC9 ENSG00000162755 CDS Human protein_coding chr1:161069225 chr1:161069226 synonymous SNV . 0 22 hPsi_associated_SNPs_6492 0 0 0 0 2 chromatin 0.438718605317383 0.438713523242268 0 0 hPsi_site_11909 iPseU_CNN:0;iRNA_PseU:0 11910 chr19 3586496 3586496 1 + T G UCEC 3586495 + 3586475 3586515 41 TCCTTCTCCCCCGGGAAGATTTTATTCTGCACCCTCAACAG TCCTTCTCCCCCGGGAAGATTGTATTCTGCACCCTCAACAG < 41bp 0.811218963342724 0.480128129155704 0.44918343 0.30757248 prediction 0.622437926685447 Functional Loss - GIPC3 ENSG00000179855 CDS Human protein_coding chr19:3586495 chr19:3586496 nonsynonymous SNV 0.584 3 22 hPsi_associated_SNPs_6493 0 0 0 0 1 exosome 0.438719661949764 0.438712621860224 0 0 hPsi_site_11910 iPseU_CNN:0;iRNA_PseU:0 11911 chr6 96996090 96996090 1 + T G UCEC 96996089 + 96996069 96996109 41 TTCCAGGATGAGATTGAAGATTTTTTAAGAAAACACATACA TTCCAGGATGAGATTGAAGATGTTTTAAGAAAACACATACA < 41bp 0.81117998209501 0.487655507303084 0.27742064 0.237991 prediction 0.62235996419002 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96996089 chr6:96996090 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_6494 0 0 1 1 2 Endoplasmic reticulum 0.438716330619981 0.438808498758894 0 0 hPsi_site_11911 iPseU_CNN:0;iRNA_PseU:0 11912 chr8 401409 401409 1 + A G BRCA 401408 + 401388 401428 41 TGGATTTGCCGATTAGAAACTATTCTCGCCTGGCAACAACA TGGATTTGCCGATTAGAAACTGTTCTCGCCTGGCAACAACA < 41bp 0.811163285305306 0.388962324935602 0.35019213 0.26098496 prediction 0.622326570610612 Functional Loss - FBXO25 ENSG00000147364 CDS Human protein_coding chr8:401408 chr8:401409 nonsynonymous SNV 0.976 0 22 hPsi_associated_SNPs_6495 0 0 1 0 1 Cytosol 0.43872720567791 0.433067643386753 0 0 hPsi_site_11912 iPseU_CNN:0;iRNA_PseU:0 11913 chr3 63649711 63649711 1 + A G UCEC 63649710 + 63649690 63649730 41 AGACTTCATGATCTTGCTCTTAAGCATCACTGTCATGTCAG AGACTTCATGATCTTGCTCTTGAGCATCACTGTCATGTCAG < 41bp 0.811162064891532 0.421768476444183 0.5443849 0.28224155 prediction 0.622324129783064 Functional Loss - SNTN ENSG00000188817 CDS Human protein_coding chr3:63649710 chr3:63649711 synonymous SNV . 0 22 hPsi_associated_SNPs_6496 0 0 0 0 1 unknown 0.436100152743465 0.444185200744221 0.0887697999999999 0 hPsi_site_11913 iPseU_CNN:0.0887697999999999;iRNA_PseU:0 11914 chr7 150698977 150698977 1 + A G UCEC 150698976 + 150698956 150698996 41 GAGTGAAGGCGACAATCCTGTATGGCTCCGAGACCGGCCGG GAGTGAAGGCGACAATCCTGTGTGGCTCCGAGACCGGCCGG < 41bp 0.917305314681274 0.606151453684711 0.83966744 0.6056912 prediction 0.622307721993127 Functional Loss - NOS3 ENSG00000164867 CDS Human protein_coding chr7:150698976 chr7:150698977 nonsynonymous SNV 0.171 5 22 hPsi_associated_SNPs_6497 0 0 0 0 2 chromatin 0.438718594114544 0.438718675736143 0.46795248 0 hPsi_site_11914 iPseU_CNN:0.46795248;iRNA_PseU:0 11915 chr8 144732494 144732494 1 + A G GBM 144732493 + 144732473 144732513 41 CGCATGCTGGGGAGAAACCTTACACGTGCGATCAGTGTGGG CGCATGCTGGGGAGAAACCTTGCACGTGCGATCAGTGTGGG < 41bp 0.905821467811444 0.594673964606079 0.376057 0.20976502 prediction 0.622295006410729 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732493 chr8:144732494 nonsynonymous SNV 0.738 1 22 hPsi_associated_SNPs_6498 0 0 1 0 0 cytosol 0.440605849367102 0.439104579564759 0 0 hPsi_site_11915 iPseU_CNN:0;iRNA_PseU:0 11916 chrX 13337486 13337486 1 + T G UCEC 13337485 + 13337465 13337505 41 CTAATTTTTTTCCATTAAGTTTTGGTGTATCCATCTCTTCG CTAATTTTTTTCCATTAAGTTGTGGTGTATCCATCTCTTCG < 41bp 0.811101293924258 0.500034528883581 0.28523678 0.24342829 prediction 0.622133530081354 Functional Loss - ATXN3L ENSG00000123594 CDS Human protein_coding chrX:13337485 chrX:13337486 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_6499 0 0 1 0 0 nucleoplasm 0.439149474099389 0.438718531714152 0 0 hPsi_site_11916 iPseU_CNN:0;iRNA_PseU:0 11917 chr11 56113813 56113813 1 + A G UCEC 56113812 + 56113792 56113832 41 TGCACAAAAACACAATTTCTTACAATTGGTATGCCACTCAG TGCACAAAAACACAATTTCTTGCAATTGGTATGCCACTCAG < 41bp 0.885230921996621 0.574182329944062 0.26988167 0.19566253 prediction 0.622097184105119 Functional Loss - OR8K1 ENSG00000150261 CDS Human protein_coding chr11:56113812 chr11:56113813 nonsynonymous SNV 0.627 1 22 hPsi_associated_SNPs_6500 0 0 0 0 0 unknown 0.438768494801498 0.438747712970147 0 0 hPsi_site_11917 iPseU_CNN:0;iRNA_PseU:0 11918 chr4 186267751 186267751 1 + A C rs3756275 186267750 + 186267730 186267770 41 AGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGA AGCAAGCTGCCTTTCAAATCTCTAGATCAAAAGTTTATGGA < 41bp 0.856106884270389 0.545062145959653 0.59940845 0.31974286 prediction 0.622089476621471 Functional Loss - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186267750 chr4:186267751 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6501 0 0 1 0 2 Endoplasmic reticulum 0.44004904936077 0.438749128840475 0.1988169 0 hPsi_site_11918 iPseU_CNN:0.1988169;iRNA_PseU:0 11919 chrX 57162487 57162487 1 + T C UCEC 57162488 - 57162468 57162508 41 TACCAGCTTCTAGATGATTATAAGGAAGGTGACCTCCGCAT TACCAGCTTCTAGATGATTATGAGGAAGGTGACCTCCGCAT < 41bp 0.811044353052078 0.400267595722468 0.53396815 0.26545298 prediction 0.622088706104157 Functional Loss - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162488 chrX:57162487 nonsynonymous SNV 0.902 2 22 hPsi_associated_SNPs_6502 0 0 0 0 0 exosome 0.438718592995102 0.438718592995084 0.0679362999999999 0 hPsi_site_11919 iPseU_CNN:0.0679362999999999;iRNA_PseU:0 11920 chr3 44905702 44905702 1 + T G READ 44905701 + 44905681 44905721 41 TCCTGCAGGTGAGCATGGGTTTATGCGTCTTAGGCATTATT TCCTGCAGGTGAGCATGGGTTGATGCGTCTTAGGCATTATT < 41bp 0.824765584031578 0.513739386581352 0.47941276 0.31664386 prediction 0.622052394900452 Functional Loss - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44905701 chr3:44905702 stopgain 0.005 0 22 hPsi_associated_SNPs_6503 0 0 0 0 1 exosome 0.438744850858903 0.438458961846855 0 0 hPsi_site_11920 iPseU_CNN:0;iRNA_PseU:0 11921 chr2 149528687 149528687 1 + T G COAD 149528686 + 149528666 149528706 41 ACCCTGAAATGCTGAATAGTTTTTCAAGCTCTTCCCAAACT ACCCTGAAATGCTGAATAGTTGTTCAAGCTCTTCCCAAACT < 41bp 0.824735680132831 0.513716669896487 0.84035605 0.6417559 prediction 0.622038020472688 Functional Loss - EPC2 ENSG00000135999 CDS Human protein_coding chr2:149528686 chr2:149528687 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6504 0 0 1 0 0 Cytosol 0.438734572146654 0.437959111879426 0.3972003 0 hPsi_site_11921 iPseU_CNN:0.3972003;iRNA_PseU:0 11922 chr16 69333589 69333589 1 + A G COAD 69333588 + 69333568 69333608 41 GAGGCTCCAGCAGCATATTGTACCGCTACCCCTTTGAAAGG GAGGCTCCAGCAGCATATTGTGCCGCTACCCCTTTGAAAGG < 41bp 0.811018254629772 0.38786300070503 0.7181307 0.300722 prediction 0.622036509259544 Functional Loss - SNTB2 ENSG00000168807;ENSG00000260914 CDS Human other chr16:69333588 chr16:69333589 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6505 0 0 0 0 2 Ribosome 0.438720896162743 0.438718604153924 0.4362614 0 hPsi_site_11922 iPseU_CNN:0.4362614;iRNA_PseU:0 11923 chr5 120022321 120022321 1 + A G rs149836410 120022320 + 120022300 120022340 41 CACAGTAACAGCTTCCCCCCTATCAGACCTGCAACTGTGCC CACAGTAACAGCTTCCCCCCTGTCAGACCTGCAACTGTGCC < 41bp 0.810983897861735 0.393719299897991 0.5870834 0.526497 prediction 0.62196779572347 Functional Loss - PRR16 ENSG00000184838 CDS Human protein_coding chr5:120022320 chr5:120022321 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_6506 0 0 0 0 0 Cytosol 0.438632191600294 0.438714943045706 0.1211728 0 hPsi_site_11923 iPseU_CNN:0.1211728;iRNA_PseU:0 11924 chr4 188924176 188924176 1 + A G STAD 188924175 + 188924155 188924195 41 GGGATGATTTCTCAGACTGTTACATAGAATGCGTCATAAGG GGGATGATTTCTCAGACTGTTGCATAGAATGCGTCATAAGG < 41bp 0.905071851427304 0.594104837296673 0.72549534 0.30980825 prediction 0.621934028261261 Functional Loss - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924175 chr4:188924176 nonsynonymous SNV 0.700 2 22 hPsi_associated_SNPs_6507 0 0 0 0 0 Nucleus 0.4387798359538 0.438713823740805 0.45099068 0 hPsi_site_11924 iPseU_CNN:0.45099068;iRNA_PseU:0 11925 chr1 4832561 4832561 1 + A G UCEC 4832560 + 4832540 4832580 41 TGCACTCGACGACGGGGGAGTACAAATCCACATTTAATGGA TGCACTCGACGACGGGGGAGTGCAAATCCACATTTAATGGA < 41bp 0.810918651600828 0.384571009840733 0.7314333 0.4720427 prediction 0.621837303201656 Functional Loss - AJAP1 ENSG00000196581 CDS Human protein_coding chr1:4832560 chr1:4832561 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_6508 0 0 0 0 1 exosome 0.438719780442939 0.438718651743068 0.4628666 0 hPsi_site_11925 iPseU_CNN:0.4628666;iRNA_PseU:0 11926 chr14 35579812 35579812 1 + T C UCEC 35579813 - 35579793 35579833 41 GCCTGCTGAAGATGAAGTCTTACTACAGAAATTAAGAGAGG GCCTGCTGAAGATGAAGTCTTGCTACAGAAATTAAGAGAGG < 41bp 0.81090889337242 0.398320983340051 0.339243 0.29187107 prediction 0.621817786744839 Functional Loss - PPP2R3C ENSG00000092020 CDS Human protein_coding chr14:35579813 chr14:35579812 synonymous SNV . 0 22 hPsi_associated_SNPs_6509 0 0 1 0 2 chromatin 0.440292358601746 0.516673351037817 0 0 hPsi_site_11926 iPseU_CNN:0;iRNA_PseU:0 11927 chr1 6638795 6638795 1 + T G UCEC 6638794 + 6638774 6638814 41 CTTCCCGCGCACTGTGGTGTTTTTGGCTTTGCGTGAGCACA CTTCCCGCGCACTGTGGTGTTGTTGGCTTTGCGTGAGCACA < 41bp 0.832505803921099 0.521631381660264 0.70351875 0.61880034 prediction 0.62174884452167 Functional Loss - TAS1R1 ENSG00000173662 CDS Human protein_coding chr1:6638794 chr1:6638795 nonsynonymous SNV 0.225 1 22 hPsi_associated_SNPs_6510 0 0 0 0 1 membrane 0.438749417521652 0.422887652261785 0.16943682 0 hPsi_site_11927 iPseU_CNN:0.16943682;iRNA_PseU:0 11928 chrX 151820079 151820079 1 + A G UCEC 151820078 + 151820058 151820098 41 GTATCAAGGCCATTGATATCTATATCCTCGTGTGCTTGTTC GTATCAAGGCCATTGATATCTGTATCCTCGTGTGCTTGTTC < 41bp 0.90729496233818 0.59642269226412 0.56156206 0.48597145 prediction 0.62174454014812 Functional Loss - GABRQ ENSG00000147402 CDS Human other chrX:151820078 chrX:151820079 nonsynonymous SNV 0.935 4 22 hPsi_associated_SNPs_6511 0 0 0 0 1 chromatin 0.438419841316809 0.423149495539073 0.12312412 0 hPsi_site_11928 iPseU_CNN:0.12312412;iRNA_PseU:0 11929 chr9 36107999 36107999 1 + T G UCEC 36107998 + 36107978 36108018 41 AAACTGGGAGAAGCTTCTGATTTCATTGTCCGTCAAGGGAC AAACTGGGAGAAGCTTCTGATGTCATTGTCCGTCAAGGGAC < 41bp 0.836721871112813 0.525851606275666 0.45195365 0.31299183 prediction 0.621740529674294 Functional Loss - RECK ENSG00000122707 CDS Human protein_coding chr9:36107998 chr9:36107999 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6512 0 0 1 0 1 exosome 0.438711234196773 0.438694555545105 0 0 hPsi_site_11929 iPseU_CNN:0;iRNA_PseU:0 11930 chr4 120107304 120107304 1 + A G LIHC 120107303 + 120107283 120107323 41 TGAGAATATTCCTATAGTGATAACAACCGAACCTACAGATG TGAGAATATTCCTATAGTGATGACAACCGAACCTACAGATG < 41bp 0.81083226519096 0.419773152496272 0.32320145 0.20740387 prediction 0.621664530381919 Functional Loss - MYOZ2 ENSG00000172399 CDS Human protein_coding chr4:120107303 chr4:120107304 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_6513 0 0 0 0 0 exosome 0.438718664656714 0.438718747910598 0 0 hPsi_site_11930 iPseU_CNN:0;iRNA_PseU:0 11931 chr14 61512109 61512109 1 + A G SARC 61512108 + 61512088 61512128 41 GCTTTTTCATTTCTCTGCCATACCTCAATATTGCCCATATA GCTTTTTCATTTCTCTGCCATGCCTCAATATTGCCCATATA < 41bp 0.810802962898586 0.399715736165222 0.41569132 0.2623912 prediction 0.621605925797171 Functional Loss - SLC38A6 ENSG00000139974 CDS Human protein_coding chr14:61512108 chr14:61512109 nonsynonymous SNV 0.966 3 22 hPsi_associated_SNPs_6514 0 0 1 1 1 Endoplasmic reticulum 0.438693776899885 0.437651789563374 0 0 hPsi_site_11931 iPseU_CNN:0;iRNA_PseU:0 11932 chr1 248402598 248402598 1 + A G COAD 248402597 + 248402577 248402617 41 CTGTCATGGCTTATGACCGCTATGTGGCTATATGTCACCCT CTGTCATGGCTTATGACCGCTGTGTGGCTATATGTCACCCT < 41bp 0.898120043234685 0.587323610888723 0.6440512 0.38934886 prediction 0.621592864691924 Functional Loss - OR2M4 ENSG00000171180 CDS Human protein_coding chr1:248402597 chr1:248402598 nonsynonymous SNV 0.022 3 22 hPsi_associated_SNPs_6515 0 0 0 0 0 exosome 0.43858091860274 0.437449922072949 0.2881024 0 hPsi_site_11932 iPseU_CNN:0.2881024;iRNA_PseU:0 11933 chr14 105931081 105931081 1 + A G LUSC 105931080 + 105931060 105931100 41 TGAAGACCAGGCAGGCTTTCTATCTGCACACGACGAAGCTG TGAAGACCAGGCAGGCTTTCTGTCTGCACACGACGAAGCTG < 41bp 0.909944745754637 0.599159190332269 0.58024514 0.32761136 prediction 0.621571110844735 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105931080 chr14:105931081 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6516 0 0 1 0 0 Cytosol 0.438715892834238 0.438630238472779 0.16049028 0 hPsi_site_11933 iPseU_CNN:0.16049028;iRNA_PseU:0 11934 chr7 143633232 143633232 1 + A G UCEC 143633231 + 143633211 143633251 41 GAGGTGAAGGGGGCCTGGCATAAACTATTAGAGAAATTCTC GAGGTGAAGGGGGCCTGGCATGAACTATTAGAGAAATTCTC < 41bp 0.810781877062789 0.422545674888917 0.27721816 0.1995604 prediction 0.621563754125578 Functional Loss - OR2F2 ENSG00000221910 CDS Human protein_coding chr7:143633231 chr7:143633232 nonsynonymous SNV 0.741 4 22 hPsi_associated_SNPs_6517 0 0 0 0 0 unknown 0.438718592995101 0.438718582378433 0 0 hPsi_site_11934 iPseU_CNN:0;iRNA_PseU:0 11935 chr1 158436055 158436055 1 + A G CESC 158436054 + 158436034 158436074 41 TCCCTTCCTCCGTTGGAAGATACAAGACCTTCTCCACCTGT TCCCTTCCTCCGTTGGAAGATGCAAGACCTTCTCCACCTGT < 41bp 0.893852463000353 0.583073472352268 0.64845407 0.2992013 prediction 0.621557981296171 Functional Loss - OR10K1 ENSG00000173285 CDS Human protein_coding chr1:158436054 chr1:158436055 nonsynonymous SNV 0.898 0 22 hPsi_associated_SNPs_6518 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.29690814 0 hPsi_site_11935 iPseU_CNN:0.29690814;iRNA_PseU:0 11936 chr11 19173823 19173823 1 + A C ESCA 19173822 + 19173802 19173842 41 GGAAATGTTAATGCAGTTGATAAGCTTTTGGAAGCTGGTTC GGAAATGTTAATGCAGTTGATCAGCTTTTGGAAGCTGGTTC < 41bp 0.810764410127589 0.450687214555136 0.34453738 0.2453273 prediction 0.621528820255178 Functional Loss - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19173822 chr11:19173823 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6519 0 0 1 0 1 Nucleus 0.438718592328112 0.438718591022766 0 0 hPsi_site_11936 iPseU_CNN:0;iRNA_PseU:0 11937 chr17 29848990 29848990 1 + T G UCEC 29848989 + 29848969 29849009 41 CAACAGCGAATTGCTAGATGTTTACTGCTCTCAATGCTGCA CAACAGCGAATTGCTAGATGTGTACTGCTCTCAATGCTGCA < 41bp 0.859604289779942 0.548862628114396 0.6124516 0.5812565 prediction 0.621483323331092 Functional Loss - RAB11FIP4 ENSG00000131242 CDS Human protein_coding chr17:29848989 chr17:29848990 synonymous SNV . 0 22 hPsi_associated_SNPs_6520 0 0 1 0 2 Ribosome 0.438987702698734 0.438767291630148 0.0623902000000001 0 hPsi_site_11937 iPseU_CNN:0.0623902000000001;iRNA_PseU:0 11938 chr1 55277492 55277492 1 + A C rs185058391 55277491 + 55277471 55277511 41 ACTATCCAGGCCCTGGAAATTATGGGGAGAAGGGTAACCCA ACTATCCAGGCCCTGGAAATTCTGGGGAGAAGGGTAACCCA < 41bp 0.810729544362716 0.42917040502732 0.6383126 0.2911314 prediction 0.621459088725432 Functional Loss - LEXM ENSG00000162398 CDS Human protein_coding chr1:55277491 chr1:55277492 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6521 0 0 0 0 1 exosome 0.438718592995243 0.438718592994158 0.2766252 0 hPsi_site_11938 iPseU_CNN:0.2766252;iRNA_PseU:0 11939 chr1 43638021 43638021 1 + A C rs375902406 43638020 + 43638000 43638040 41 TACTTCCGGTTTGTCGTTGCTATAGGAACCGCTACGGCGTT TACTTCCGGTTTGTCGTTGCTCTAGGAACCGCTACGGCGTT < 41bp 0.855540869950925 0.544818097137659 0.35400668 0.2773124 prediction 0.621445545626532 Functional Loss - EBNA1BP2 ENSG00000117395 CDS Human protein_coding chr1:43638020 chr1:43638021 stopgain 0.995 0 22 hPsi_associated_SNPs_6522 0 0 0 0 0 Ribosome 0.438717622359476 0.438718617063368 0 0 hPsi_site_11939 iPseU_CNN:0;iRNA_PseU:0 11940 chr11 62553809 62553809 1 + A G OV 62553808 + 62553788 62553828 41 TGTGCTGGATGATTATTCAGTATCTAATGCCCAGGTCAAAG TGTGCTGGATGATTATTCAGTGTCTAATGCCCAGGTCAAAG < 41bp 0.908982760877717 0.598271254157829 0.4018284 0.29466647 prediction 0.621423013439776 Functional Loss - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62553808 chr11:62553809 synonymous SNV . 0 22 hPsi_associated_SNPs_6523 0 0 1 0 2 Ribosome 0.438718507295153 0.438718333892001 0 0 hPsi_site_11940 iPseU_CNN:0;iRNA_PseU:0 11941 chr19 52447915 52447915 1 + A G PCPG 52447914 + 52447894 52447934 41 ACCACACAGGAGAGAAACCCTATGAATGCACTGAATGTGAC ACCACACAGGAGAGAAACCCTGTGAATGCACTGAATGTGAC < 41bp 0.81069241477525 0.398417414874308 0.5994509 0.3435365 prediction 0.621384829550499 Functional Loss - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52447914 chr19:52447915 nonsynonymous SNV 0.375 3 22 hPsi_associated_SNPs_6524 0 0 0 0 0 nucleus 0.438544761380888 0.437364919256341 0.1989018 0 hPsi_site_11941 iPseU_CNN:0.1989018;iRNA_PseU:0 11942 chr3 119211357 119211357 1 + A C rs533476232 119211356 + 119211336 119211376 41 CTACGGTGAGAAGCTTACCATAAGCTTGGCACCTATACCTT CTACGGTGAGAAGCTTACCATCAGCTTGGCACCTATACCTT < 41bp 0.810689064756375 0.455205749552256 0.2914111 0.22949696 prediction 0.62137812951275 Functional Loss - POGLUT1 ENSG00000163389 UTR3 Human protein_coding chr3:119211356 chr3:119211357 . . 0 22 hPsi_associated_SNPs_6525 0 0 0 1 0 Ribosome 0.43871988985067 0.438715001848824 0 0 hPsi_site_11942 iPseU_CNN:0;iRNA_PseU:0 11943 chr3 186572089 186572089 1 + T C rs17366743 186572090 - 186572070 186572110 41 CCACACTGAATGCTGAGCGGTATACATAGGCACCTTCTCCA CCACACTGAATGCTGAGCGGTGTACATAGGCACCTTCTCCA < 41bp 0.898861838599222 0.588212814492554 0.84829175 0.5229096 prediction 0.621298048213336 Functional Loss - ADIPOQ ENSG00000181092 CDS Human protein_coding chr3:186572090 chr3:186572089 nonsynonymous SNV 0.922 1 22 hPsi_associated_SNPs_6526 0 0 0 0 0 exosome 0.438723292684257 0.438719597668404 0.6507643 0 hPsi_site_11943 iPseU_CNN:0.6507643;iRNA_PseU:0 11944 chr2 220379804 220379804 1 + A G PAAD 220379803 + 220379783 220379823 41 CCGGCTGTCACCCTCTGCAATATCAACCGCTTCCGGCATTC CCGGCTGTCACCCTCTGCAATGTCAACCGCTTCCGGCATTC < 41bp 0.810646226655962 0.387104741673267 0.5579799 0.32410103 prediction 0.621292453311923 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379803 chr2:220379804 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6527 0 0 0 0 0 chromatin 0.438797087719162 0.4387023966572 0.1159598 0 hPsi_site_11944 iPseU_CNN:0.1159598;iRNA_PseU:0 11945 chr3 47882519 47882519 1 + T G LUSC 47882518 + 47882498 47882538 41 GCAGCTGAATCCAGAGAGTATTCGACCAGGGGGACCTGGGG GCAGCTGAATCCAGAGAGTATGCGACCAGGGGGACCTGGGG < 41bp 0.856272107241633 0.545643716500154 0.32910922 0.20959744 prediction 0.621256781482958 Functional Loss - DHX30 ENSG00000132153 CDS Human protein_coding chr3:47882518 chr3:47882519 nonsynonymous SNV 0.978 2 22 hPsi_associated_SNPs_6528 0 0 1 0 0 Cytosol 0.43871883053601 0.438718593138416 0 0 hPsi_site_11945 iPseU_CNN:0;iRNA_PseU:0 11946 chr2 27656306 27656306 1 + T G UCEC 27656305 + 27656285 27656325 41 AGTGAAGATGAGTCTGAGATTTTGGAAGAGTCGCCCTGTGG AGTGAAGATGAGTCTGAGATTGTGGAAGAGTCGCCCTGTGG < 41bp 0.846366064718673 0.535751696606891 0.3919235 0.3251527 prediction 0.621228736223562 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27656305 chr2:27656306 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6529 0 0 1 0 1 Cytosol 0.438718592796536 0.438718726012566 0 0 hPsi_site_11946 iPseU_CNN:0;iRNA_PseU:0 11947 chr7 73770846 73770846 1 + A G STAD 73770845 + 73770825 73770865 41 AAGGCCAAGAAGACCAAGCGTATGGCCATGGGTGTGTCAGC AAGGCCAAGAAGACCAAGCGTGTGGCCATGGGTGTGTCAGC < 41bp 0.810606905412964 0.379875000471625 0.2889915 0.27656835 prediction 0.621213810825927 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73770845 chr7:73770846 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6530 0 0 0 0 0 Ribosome 0.438718482228787 0.438717773393557 0 0 hPsi_site_11947 iPseU_CNN:0;iRNA_PseU:0 11948 chr3 49212346 49212346 1 + T G COAD 49212345 + 49212325 49212365 41 AGCAGCCTGGGCCCCACAACTTCTACTCTCGCCCACACTTT AGCAGCCTGGGCCCCACAACTGCTACTCTCGCCCACACTTT < 41bp 0.810606593203907 0.468264568385857 0.40577835 0.2070502 prediction 0.621213186407815 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212345 chr3:49212346 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6531 0 0 0 0 1 Cytosol 0.439160210070111 0.438706600500246 0 0 hPsi_site_11948 iPseU_CNN:0;iRNA_PseU:0 11949 chrX 37545388 37545388 1 + A G UCEC 37545387 + 37545367 37545407 41 GCAGCTCACGCTTCTCTTCGTACACCGCGACCTCAGCCGCG GCAGCTCACGCTTCTCTTCGTGCACCGCGACCTCAGCCGCG < 41bp 0.903479770056268 0.592883960540959 0.51852745 0.17937657 prediction 0.621191619030618 Functional Loss - XK ENSG00000047597 CDS Human protein_coding chrX:37545387 chrX:37545388 synonymous SNV . 0 22 hPsi_associated_SNPs_6532 0 0 1 0 1 Endoplasmic reticulum 0.432488380701075 0.438083587312928 0.0370549 0 hPsi_site_11949 iPseU_CNN:0.0370549;iRNA_PseU:0 11950 chr19 51647770 51647770 1 + A G rs114209391 51647769 + 51647749 51647789 41 TGTGAGCAGGGGACGCCCCCTATGATCTCCTGGATGGGGAC TGTGAGCAGGGGACGCCCCCTGTGATCTCCTGGATGGGGAC < 41bp 0.810578407543916 0.391980541953072 0.25512806 0.25203267 prediction 0.621156815087831 Functional Loss - SIGLEC7 ENSG00000168995 CDS Human protein_coding chr19:51647769 chr19:51647770 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_6533 0 0 0 0 0 exosome 0.42127218864537 0.36807472099625 0 0 hPsi_site_11950 iPseU_CNN:0;iRNA_PseU:0 11951 chr20 31607530 31607530 1 + T G GBM 31607529 + 31607509 31607549 41 GCCACAGCCTCCAACTCGGCTTTCCAGTCCCTCTTCTCCCT GCCACAGCCTCCAACTCGGCTGTCCAGTCCCTCTTCTCCCT < 41bp 0.837097378085191 0.526541686854415 0.60425013 0.3377986 prediction 0.621111382461552 Functional Loss - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31607529 chr20:31607530 nonsynonymous SNV 0.220 1 22 hPsi_associated_SNPs_6534 0 0 0 0 1 cytosol 0.438713149377844 0.438719308185046 0.20850026 0 hPsi_site_11951 iPseU_CNN:0.20850026;iRNA_PseU:0 11952 chr3 170099069 170099069 1 + A G UCEC 170099068 + 170099048 170099088 41 GAATGGAATTACAGTCATGGTATCCTGTTATAAAGCAGGAA GAATGGAATTACAGTCATGGTGTCCTGTTATAAAGCAGGAA < 41bp 0.810546742691701 0.39434028857128 0.49966893 0.25326055 prediction 0.621093485383402 Functional Loss - SKIL ENSG00000136603 CDS Human protein_coding chr3:170099068 chr3:170099069 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_6535 0 0 1 0 2 Nucleus 0.438718592995102 0.438718592995103 0 0 hPsi_site_11952 iPseU_CNN:0;iRNA_PseU:0 11953 chr5 79616829 79616829 1 + T C UCEC 79616830 - 79616810 79616850 41 CTGATAGGATTTTATCAGTTTACTGAGCTCAGTATGTTGTT CTGATAGGATTTTATCAGTTTGCTGAGCTCAGTATGTTGTT < 41bp 0.810541094864927 0.420409591951934 0.6446719 0.25510222 prediction 0.621082189729854 Functional Loss - SPZ1 ENSG00000164299 CDS Human protein_coding chr5:79616830 chr5:79616829 synonymous SNV . 0 22 hPsi_associated_SNPs_6536 0 0 0 0 0 unknown 0.438595435331716 0.43868759385599 0.2893438 0 hPsi_site_11953 iPseU_CNN:0.2893438;iRNA_PseU:0 11954 chr8 99962886 99962886 1 + A G UCEC 99962885 + 99962865 99962905 41 ACCTTATATTGATTTTCAGATACATCCATTCCAAAGAAAAA ACCTTATATTGATTTTCAGATGCATCCATTCCAAAGAAAAA < 41bp 0.810532191018397 0.425434323151491 0.68382573 0.3126194 prediction 0.621064382036794 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99962885 chr8:99962886 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6537 0 0 0 0 2 exosome 0.438759857124816 0.438731554268301 0.36765146 0 hPsi_site_11954 iPseU_CNN:0.36765146;iRNA_PseU:0 11955 chr3 64084739 64084739 1 + A G COAD 64084738 + 64084718 64084758 41 CCAATCATATTAAGAAATGATACAGTTTTTGCTCTTCTGTC CCAATCATATTAAGAAATGATGCAGTTTTTGCTCTTCTGTC < 41bp 0.810521400472459 0.410373082397147 0.35907668 0.27892658 prediction 0.621042800944919 Functional Loss - PRICKLE2 ENSG00000163637 CDS Human protein_coding chr3:64084738 chr3:64084739 synonymous SNV . 0 22 hPsi_associated_SNPs_6538 0 0 0 0 0 Endoplasmic reticulum 0.438183382307223 0.442133776742172 0 0 hPsi_site_11955 iPseU_CNN:0;iRNA_PseU:0 11956 chr1 220298601 220298601 1 + A C COAD 220298600 + 220298580 220298620 41 CAAACCACTGAGCATATTGTTAAACTAGTGGAACAACACGG CAAACCACTGAGCATATTGTTCAACTAGTGGAACAACACGG < 41bp 0.810505638431539 0.438474322457042 0.6696619 0.38398474 prediction 0.621011276863079 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220298600 chr1:220298601 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6539 0 0 1 0 2 Ribosome 0.440800641578431 0.438501006305374 0.3393238 0 hPsi_site_11956 iPseU_CNN:0.3393238;iRNA_PseU:0 11957 chr9 140510521 140510521 1 + A G HNSC 140510520 + 140510500 140510540 41 GGTTTGTCAGTTACCTTATCTATAAAATGCACAGGACCAGG GGTTTGTCAGTTACCTTATCTGTAAAATGCACAGGACCAGG < 41bp 0.855837416295897 0.545359145562486 0.44370756 0.28853637 prediction 0.620956541466823 Functional Loss - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510520 chr9:140510521 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_6540 0 0 0 0 0 unknown 0.438733258639709 0.438914439570486 0 0 hPsi_site_11957 iPseU_CNN:0;iRNA_PseU:0 11958 chr6 159134834 159134834 1 + A G COAD 159134833 + 159134813 159134853 41 CCTTCTGTCTCTGTTTTAGTTACAGGAATTTGGTCAGTTTA CCTTCTGTCTCTGTTTTAGTTGCAGGAATTTGGTCAGTTTA < 41bp 0.810472810829381 0.405466461440824 0.31807855 0.24519902 prediction 0.620945621658762 Functional Loss - SYTL3 ENSG00000164674 CDS Human protein_coding chr6:159134833 chr6:159134834 synonymous SNV . 0 22 hPsi_associated_SNPs_6541 0 0 0 0 2 exosome 0.438718592968194 0.438717987039295 0 0 hPsi_site_11958 iPseU_CNN:0;iRNA_PseU:0 11959 chr7 99045885 99045885 1 + A C BRCA 99045884 + 99045864 99045904 41 AGATGCCCGAGTGCTACTTCTACTCCAAGTTCGGTAAGGCG AGATGCCCGAGTGCTACTTCTCCTCCAAGTTCGGTAAGGCG < 41bp 0.810471574077193 0.423587851459335 0.5634162 0.20100081 prediction 0.620943148154385 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99045884 chr7:99045885 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6542 0 0 1 0 1 chromatin 0.438727253502243 0.438718598974548 0.1268324 0 hPsi_site_11959 iPseU_CNN:0.1268324;iRNA_PseU:0 11960 chr10 64565891 64565891 1 + A G rs572689382 64565890 + 64565870 64565910 41 GGAGGAATGGGGCAGGGGACTATCTGAAGCGCTTCCATCCT GGAGGAATGGGGCAGGGGACTGTCTGAAGCGCTTCCATCCT < 41bp 0.810462889272051 0.435024808157037 0.52671933 0.22980109 prediction 0.620925778544102 Functional Loss - ADO ENSG00000181915 UTR3 Human protein_coding chr10:64565890 chr10:64565891 . . 0 22 hPsi_associated_SNPs_6543 0 0 1 0 0 exosome 0.438718577048027 0.438718548381148 0.0534386600000001 0 hPsi_site_11960 iPseU_CNN:0.0534386600000001;iRNA_PseU:0 11961 chr14 103958157 103958157 1 + A G HNSC 103958156 + 103958136 103958176 41 CCAGTTGCTTCAACACACAGTATCAGTAGTGCAGCCACCCC CCAGTTGCTTCAACACACAGTGTCAGTAGTGCAGCCACCCC < 41bp 0.81044964461197 0.382384502712822 0.5307567 0.25995713 prediction 0.620899289223939 Functional Loss - MARK3 ENSG00000075413 CDS Human protein_coding chr14:103958156 chr14:103958157 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_6544 0 0 1 0 1 Cytosol 0.437712438711029 0.434970301524468 0.0615133999999999 0 hPsi_site_11961 iPseU_CNN:0.0615133999999999;iRNA_PseU:0 11962 chr16 57003373 57003373 1 + T G KIRC 57003372 + 57003352 57003392 41 CAAGTCCATTGATGTCTCCATTCAGAACGTGTCTGTGGTCT CAAGTCCATTGATGTCTCCATGCAGAACGTGTCTGTGGTCT < 41bp 0.810435941423063 0.468067499349493 0.35442218 0.32182163 prediction 0.620871882846125 Functional Loss - CETP ENSG00000087237 CDS Human protein_coding chr16:57003372 chr16:57003373 nonsynonymous SNV 0.238 3 22 hPsi_associated_SNPs_6545 0 0 0 0 2 exosome 0.439053240311637 0.438494788009519 0 0 hPsi_site_11962 iPseU_CNN:0;iRNA_PseU:0 11963 chrX 106031194 106031194 1 + A G UCEC 106031193 + 106031173 106031213 41 GTGCTGTGTGCATTGAATTGTATAAACCAAATGATTTGGTA GTGCTGTGTGCATTGAATTGTGTAAACCAAATGATTTGGTA < 41bp 0.810431487669331 0.397518940974188 0.7914861 0.4710925 prediction 0.620862975338661 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:106031193 chrX:106031194 nonsynonymous SNV 0.566 4 22 hPsi_associated_SNPs_6546 0 0 1 0 2 cytosol 0.438719459054937 0.438785475857333 0.5829722 0 hPsi_site_11963 iPseU_CNN:0.5829722;iRNA_PseU:0 11964 chr7 97821396 97821396 1 + T G STAD 97821395 + 97821375 97821415 41 TCCCTGGAGTGGTTCCTGTTTTTGATGCCCACAACCTTTCT TCCCTGGAGTGGTTCCTGTTTGTGATGCCCACAACCTTTCT < 41bp 0.810428849587091 0.47834334937979 0.7429355 0.4932424 prediction 0.620857699174183 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97821395 chr7:97821396 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6547 0 0 1 0 0 Nucleus 0.438718724102348 0.438691368455487 0.485871 0 hPsi_site_11964 iPseU_CNN:0.485871;iRNA_PseU:0 11965 chr19 37974974 37974974 1 + A G UCEC 37974973 + 37974953 37974993 41 GGCGTGTTTCAAGGAAGAGATAATCACTCATGAAGAACCCC GGCGTGTTTCAAGGAAGAGATGATCACTCATGAAGAACCCC < 41bp 0.810428436247907 0.403107523316439 0.28963053 0.22462729 prediction 0.620856872495815 Functional Loss - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37974973 chr19:37974974 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_6548 0 0 1 0 0 exosome 0.438690173564283 0.438718770236876 0 0 hPsi_site_11965 iPseU_CNN:0;iRNA_PseU:0 11966 chr11 77314623 77314623 1 + A C STAD 77314622 + 77314602 77314642 41 AGGAAGTCTAACAGGAGCTGTATTTAATCCAGCTTTGGCAC AGGAAGTCTAACAGGAGCTGTCTTTAATCCAGCTTTGGCAC < 41bp 0.810423109016894 0.435784183604194 0.53747946 0.35541558 prediction 0.620846218033788 Functional Loss - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77314622 chr11:77314623 synonymous SNV . 0 22 hPsi_associated_SNPs_6549 0 0 0 4 2 Ribosome 0.429227700167135 0.438789574488395 0.07495892 0 hPsi_site_11966 iPseU_CNN:0.07495892;iRNA_PseU:0 11967 chr1 27121700 27121700 1 + T G COAD 27121699 + 27121679 27121719 41 ACGCTGCAGTGCTGCTGCTGTTTGGAGGTCTGTGCATGCAT ACGCTGCAGTGCTGCTGCTGTGTGGAGGTCTGTGCATGCAT < 41bp 0.83343812582495 0.52302950969195 0.31833404 0.33660054 prediction 0.620817232266 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27121699 chr1:27121700 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_6550 0 0 1 0 1 Endoplasmic reticulum 0.438132544053015 0.438140522507691 0 0 hPsi_site_11967 iPseU_CNN:0;iRNA_PseU:0 11968 chr7 2402752 2402752 1 + T G UCEC 2402751 + 2402731 2402771 41 ATATTCCAGAGAAACAGCCTTTCAAAGACCTGGTGAGTGGC ATATTCCAGAGAAACAGCCTTGCAAAGACCTGGTGAGTGGC < 41bp 0.810399514618799 0.470503084746152 0.74007636 0.3428923 prediction 0.620799029237598 Functional Loss - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2402751 chr7:2402752 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6551 0 0 1 0 2 Ribosome 0.438694477777316 0.438655445957782 0.48015272 0 hPsi_site_11968 iPseU_CNN:0.48015272;iRNA_PseU:0 11969 chr5 113740192 113740192 1 + A G UCEC 113740191 + 113740171 113740211 41 ATAGCCATGACTTATGAGCGTATTTTCTTCATCTGCTTGGA ATAGCCATGACTTATGAGCGTGTTTTCTTCATCTGCTTGGA < 41bp 0.906861918447881 0.596467767219311 0.39836845 0.33809376 prediction 0.620788302457139 Functional Loss - KCNN2 ENSG00000080709 CDS Human protein_coding chr5:113740191 chr5:113740192 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6552 0 0 0 0 1 Cytosol 0.438710597574797 0.438693260555 0 0 hPsi_site_11969 iPseU_CNN:0;iRNA_PseU:0 11970 chr11 56043691 56043691 1 + A G LUAD 56043690 + 56043670 56043710 41 ATTAGGCATGTCTTTTGTAATATGCCTCCTCTGCTTGCTAT ATTAGGCATGTCTTTTGTAATGTGCCTCCTCTGCTTGCTAT < 41bp 0.879620258389364 0.569238699706332 0.37978685 0.24596375 prediction 0.620763117366063 Functional Loss - OR5T1 ENSG00000181698 CDS Human protein_coding chr11:56043690 chr11:56043691 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_6553 0 0 0 0 0 unknown 0.438709442254613 0.438664690965628 0 0 hPsi_site_11970 iPseU_CNN:0;iRNA_PseU:0 11971 chr11 55406124 55406124 1 + A G COAD 55406123 + 55406103 55406143 41 TTCCTATAATAACTGTATGATACAACTCTTTACCACCCATT TTCCTATAATAACTGTATGATGCAACTCTTTACCACCCATT < 41bp 0.810377794104498 0.431269032130478 0.46741578 0.20162168 prediction 0.620755588208995 Functional Loss - OR4P4 ENSG00000181927 CDS Human protein_coding chr11:55406123 chr11:55406124 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_6554 0 0 0 0 0 unknown 0.438718975221224 0.438706136534895 0 0 hPsi_site_11971 iPseU_CNN:0;iRNA_PseU:0 11972 chr4 69962559 69962559 1 + A G rs140153012 69962558 + 69962538 69962578 41 TCCAAAAGATACATTTTGGTTATATTTTTCACAAGTACAGG TCCAAAAGATACATTTTGGTTGTATTTTTCACAAGTACAGG < 41bp 0.810376998954039 0.423493092618437 0.57968116 0.28097335 prediction 0.620753997908077 Functional Loss - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69962558 chr4:69962559 synonymous SNV . 0 22 hPsi_associated_SNPs_6555 0 0 0 0 0 Endoplasmic reticulum 0.43858880041085 0.438219934052033 0.15936232 0 hPsi_site_11972 iPseU_CNN:0.15936232;iRNA_PseU:0 11973 chr5 161580153 161580153 1 + A G BLCA 161580152 + 161580132 161580172 41 ACCATTCAAATGAATAATGCTACACACCTTCAAGAGAGAGA ACCATTCAAATGAATAATGCTGCACACCTTCAAGAGAGAGA < 41bp 0.810375001968829 0.399732136367895 0.5043321 0.36068037 prediction 0.620750003937657 Functional Loss - GABRG2 ENSG00000113327 CDS Human protein_coding chr5:161580152 chr5:161580153 nonsynonymous SNV 0.974 2 22 hPsi_associated_SNPs_6556 0 0 0 0 1 exosome 0.438665795407237 0.43848903414929 0.0086641999999999 0 hPsi_site_11973 iPseU_CNN:0.0086641999999999;iRNA_PseU:0 11974 chr12 69967967 69967967 1 + A G UCEC 69967966 + 69967946 69967986 41 TGAAGGAGTCAAATTTGTTTTAGGGCCAACCCCTGTTCAAA TGAAGGAGTCAAATTTGTTTTGGGGCCAACCCCTGTTCAAA < 41bp 0.810373954819357 0.40213389925738 0.6536714 0.31714216 prediction 0.620747909638714 Functional Loss - FRS2 ENSG00000166225 CDS Human protein_coding chr12:69967966 chr12:69967967 synonymous SNV . 0 22 hPsi_associated_SNPs_6557 0 0 0 0 0 Nucleus 0.438718592995431 0.438718592995102 0.3073428 0 hPsi_site_11974 iPseU_CNN:0.3073428;iRNA_PseU:0 11975 chr16 73127566 73127566 1 + A G CESC 73127565 + 73127545 73127585 41 CACAGAATACAGTTCGCCATTACAGCGCTGATTAAATACAG CACAGAATACAGTTCGCCATTGCAGCGCTGATTAAATACAG < 41bp 0.810372870957411 0.435029059448234 0.24431685 0.29016802 prediction 0.620745741914821 Functional Loss - HCCAT5 ENSG00000260880 ncRNA_exonic Human lincRNA chr16:73127565 chr16:73127566 . . 0 22 hPsi_associated_SNPs_6558 0 0 0 1 0 unknown 0.439642562418593 0.438719774495591 0 0 hPsi_site_11975 iPseU_CNN:0;iRNA_PseU:0 11976 chr1 248569442 248569442 1 + A G STAD 248569441 + 248569421 248569461 41 ACCTTATATCGGCACAACTGTAGGATCAATGGAAGAGTACA ACCTTATATCGGCACAACTGTGGGATCAATGGAAGAGTACA < 41bp 0.810356867638607 0.420503221402614 0.6661527 0.30136886 prediction 0.620713735277213 Functional Loss - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248569441 chr1:248569442 synonymous SNV . 0 22 hPsi_associated_SNPs_6559 0 0 0 0 0 unknown 0.438737529071432 0.438718573455051 0.3323054 0 hPsi_site_11976 iPseU_CNN:0.3323054;iRNA_PseU:0 11977 chr12 122468650 122468650 1 + A G UCEC 122468649 + 122468629 122468669 41 GTGACACATCCCTACGAATCTACAAATGGGTCCCTGTGACG GTGACACATCCCTACGAATCTGCAAATGGGTCCCTGTGACG < 41bp 0.810352188150922 0.381723167015358 0.26753342 0.19100642 prediction 0.620704376301843 Functional Loss - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122468649 chr12:122468650 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6560 0 0 1 0 2 Nucleus 0.438718581259604 0.438710210275586 0 0 hPsi_site_11977 iPseU_CNN:0;iRNA_PseU:0 11978 chr16 30976201 30976201 1 + A C LUSC 30976200 + 30976180 30976220 41 TGGAATCGCTACCAGCGCCATACTTCCTACCCACCACGCCG TGGAATCGCTACCAGCGCCATCCTTCCTACCCACCACGCCG < 41bp 0.810328005494549 0.43118286873575 0.25432444 0.08055216 prediction 0.620656010989099 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976200 chr16:30976201 nonsynonymous SNV 0.927 2 22 hPsi_associated_SNPs_6561 0 0 1 0 0 Cytosol 0.438738070685912 0.438718592996719 0 0 hPsi_site_11978 iPseU_CNN:0;iRNA_PseU:0 11979 chr2 179641893 179641893 1 + A G UCEC 179641892 + 179641872 179641912 41 TTACCTGATTTTGGGATATTTATGAGGCACAATGATGTCAC TTACCTGATTTTGGGATATTTGTGAGGCACAATGATGTCAC < 41bp 0.881950092220193 0.571629331381584 0.44482493 0.3224423 prediction 0.620641521677218 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179641892 chr2:179641893 synonymous SNV . 0 22 hPsi_associated_SNPs_6562 0 0 0 0 0 Nucleus 0.438719081517853 0.438718560072477 0 0 hPsi_site_11979 iPseU_CNN:0;iRNA_PseU:0 11980 chr15 63571488 63571488 1 + A G GBM 63571487 + 63571467 63571507 41 TTGGAGCGTTTGTCTCTGTCTATATCCAAGAAATGTTCCGA TTGGAGCGTTTGTCTCTGTCTGTATCCAAGAAATGTTCCGA < 41bp 0.810277918447425 0.401715828370422 0.324472 0.26734263 prediction 0.620555836894849 Functional Loss - APH1B ENSG00000138613 CDS Human protein_coding chr15:63571487 chr15:63571488 nonsynonymous SNV 0.765 0 22 hPsi_associated_SNPs_6563 0 0 0 0 1 Endoplasmic reticulum 0.438721665353863 0.438789204967629 0 0 hPsi_site_11980 iPseU_CNN:0;iRNA_PseU:0 11981 chr4 110773023 110773023 1 + A G UCEC 110773022 + 110773002 110773042 41 GAACCTTGCCTACTTGGATTTATCAAGCAACAGACTCACCA GAACCTTGCCTACTTGGATTTGTCAAGCAACAGACTCACCA < 41bp 0.816147894879963 0.505900857612417 0.80570877 0.441651 prediction 0.620494074535091 Functional Loss - LRIT3 ENSG00000183423 CDS Human protein_coding chr4:110773022 chr4:110773023 synonymous SNV . 0 22 hPsi_associated_SNPs_6564 0 0 0 0 0 Nucleus 0.438718409795417 0.438722846798357 0.61141754 0 hPsi_site_11981 iPseU_CNN:0.61141754;iRNA_PseU:0 11982 chr1 231403518 231403518 1 + T G BRCA 231403517 + 231403497 231403537 41 TGCAAATTGAAAACATGGTTTTGAGCCCCTGGACCCTAATA TGCAAATTGAAAACATGGTTTGGAGCCCCTGGACCCTAATA < 41bp 0.838741981323821 0.5285082315614 0.61188734 0.650221 prediction 0.620467499524843 Functional Loss - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231403517 chr1:231403518 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_6565 0 0 1 0 1 Cytosol 0.438718593268117 0.43871859300173 0 0 hPsi_site_11982 iPseU_CNN:0;iRNA_PseU:0 11983 chrX 114141930 114141930 1 + A G UCEC 114141929 + 114141909 114141949 41 GCAAGTTGAGAATTTAGAGTTACCAGTAAATCCCTCCAGTG GCAAGTTGAGAATTTAGAGTTGCCAGTAAATCCCTCCAGTG < 41bp 0.810208421947746 0.405684031141146 0.73574257 0.4032554 prediction 0.620416843895493 Functional Loss - HTR2C ENSG00000147246 CDS Human protein_coding chrX:114141929 chrX:114141930 synonymous SNV . 0 22 hPsi_associated_SNPs_6566 0 0 0 0 0 exosome 0.438718208615809 0.43851839030357 0.47148514 0 hPsi_site_11983 iPseU_CNN:0.47148514;iRNA_PseU:0 11984 chr17 8158865 8158865 1 + A G COAD 8158864 + 8158844 8158884 41 GTGGAAGCCATTGCTCTGGCTACCCTGCACGACCGGATGAC GTGGAAGCCATTGCTCTGGCTGCCCTGCACGACCGGATGAC < 41bp 0.810197670712276 0.377946560443844 0.20772868 0.113962054 prediction 0.620395341424552 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8158864 chr17:8158865 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_6567 0 0 1 0 1 Nucleus 0.438124307390346 0.438759692235428 0 0 hPsi_site_11984 iPseU_CNN:0;iRNA_PseU:0 11985 chr12 6949877 6949877 1 + A G rs45453800 6949876 + 6949856 6949896 41 TGGTGGGGGCTGCCCCTCTCTATGGCCCCACACTCCTGCCC TGGTGGGGGCTGCCCCTCTCTGTGGCCCCACACTCCTGCCC < 41bp 0.881821244803571 0.57163290743268 0.6330337 0.38434467 prediction 0.620376674741783 Functional Loss - GNB3;P3H3 ENSG00000111664 intronic Human protein_coding chr12:6949876 chr12:6949877 . . 0 22 hPsi_associated_SNPs_6568 0 0 1 0 0 unknown 0.438710750076528 0.438680181563022 0.2660674 0 hPsi_site_11985 iPseU_CNN:0.2660674;iRNA_PseU:0 11986 chr8 125499589 125499589 1 + T G GBM 125499588 + 125499568 125499608 41 ATTACACCGTGTAATCATTATTTCCATGCACTTTGCCTTCG ATTACACCGTGTAATCATTATGTCCATGCACTTTGCCTTCG < 41bp 0.810172976674208 0.493518602797269 0.30751532 0.32399082 prediction 0.620345953348416 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125499588 chr8:125499589 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6569 0 0 1 0 0 Ribosome 0.4387186441477 0.437908820770519 0 0 hPsi_site_11986 iPseU_CNN:0;iRNA_PseU:0 11987 chr19 50322523 50322523 1 + A G rs549136898 50322522 + 50322502 50322542 41 ACGCTCCCACCAGCAGCGCCTATGAGTTTGTCACCTGGCTC ACGCTCCCACCAGCAGCGCCTGTGAGTTTGTCACCTGGCTC < 41bp 0.810156863831095 0.391289685320665 0.3750712 0.274918 prediction 0.62031372766219 Functional Loss - MED25 ENSG00000104973 CDS Human protein_coding chr19:50322522 chr19:50322523 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6570 0 0 1 0 2 chromatin 0.439406085500905 0.438514876771074 0 0 hPsi_site_11987 iPseU_CNN:0;iRNA_PseU:0 11988 chr5 175110841 175110841 1 + A G COAD 175110840 + 175110820 175110860 41 TACTGATCATGTGCATCACCTACTACCGCATCTTCAAGGTC TACTGATCATGTGCATCACCTGCTACCGCATCTTCAAGGTC < 41bp 0.902042859598999 0.591888944583067 0.4271252 0.2837382 prediction 0.620307830031863 Functional Loss - HRH2 ENSG00000113749 CDS Human protein_coding chr5:175110840 chr5:175110841 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_6571 0 0 0 0 0 nucleus 0.438718216231574 0.438718114772836 0 0 hPsi_site_11988 iPseU_CNN:0;iRNA_PseU:0 11989 chr12 56428966 56428966 1 + A G COAD 56428965 + 56428945 56428985 41 TTCAAGTGTGAGCACTGCCGTATCCTCTTCCTGGACCACGT TTCAAGTGTGAGCACTGCCGTGTCCTCTTCCTGGACCACGT < 41bp 0.911893374841415 0.601767236868724 0.63620836 0.3604204 prediction 0.620252275945383 Functional Loss - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428965 chr12:56428966 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6572 0 0 0 0 0 Cytosol 0.438718595454171 0.438718596670472 0.27241672 0 hPsi_site_11989 iPseU_CNN:0.27241672;iRNA_PseU:0 11990 chr15 48428956 48428956 1 + T C READ 48428957 - 48428937 48428977 41 GACTGCATTTCTTTATAATATATTGGTTAATTTTAATGTCA GACTGCATTTCTTTATAATATGTTGGTTAATTTTAATGTCA < 41bp 0.883964089069216 0.573847446892106 0.2377109 0.21970513 prediction 0.620233284354218 Functional Loss - SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48428957 chr15:48428956 nonsynonymous SNV 0.974 0 22 hPsi_associated_SNPs_6573 0 0 1 0 0 exosome 0.439747108907291 0.438675239318964 0 0 hPsi_site_11990 iPseU_CNN:0;iRNA_PseU:0 11991 chr12 131357615 131357615 1 + A G rs2293512 131357614 + 131357594 131357634 41 AGGACCTATTAAGTTCAATGTATGGGACACAGCCGGCCAGG AGGACCTATTAAGTTCAATGTGTGGGACACAGCCGGCCAGG < 41bp 0.91517198991013 0.605067826501023 0.6320708 0.28017643 prediction 0.620208326818213 Functional Loss - RAN ENSG00000132341 CDS Human protein_coding chr12:131357614 chr12:131357615 synonymous SNV . 0 22 hPsi_associated_SNPs_6574 0 0 1 0 2 Ribosome 0.438718592875043 0.438719845576646 0.2641416 0 hPsi_site_11991 iPseU_CNN:0.2641416;iRNA_PseU:0 11992 chr11 19186634 19186634 1 + A C CESC 19186633 + 19186613 19186653 41 AAGGTCACTCCACTGCCATGTATGCAACTGCTGTGTGGCTC AAGGTCACTCCACTGCCATGTCTGCAACTGCTGTGTGGCTC < 41bp 0.88439596495051 0.574296628561179 0.6191651 0.37872243 prediction 0.62019867277866 Functional Loss - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19186633 chr11:19186634 synonymous SNV . 0 22 hPsi_associated_SNPs_6575 0 0 0 0 2 Nucleus 0.438148821823239 0.438873493140814 0.2383302 0 hPsi_site_11992 iPseU_CNN:0.2383302;iRNA_PseU:0 11993 chr6 28687489 28687489 1 + A G rs116575156 28687488 + 28687468 28687508 41 AGGCTATTGCAACGGGGGTGTAGCTCAGTGGTAGAGCGCGT AGGCTATTGCAACGGGGGTGTGGCTCAGTGGTAGAGCGCGT < 41bp 0.859143017248244 0.549045872118098 0.569919 0.19888616 prediction 0.620194290260292 Functional Loss - LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687488 chr6:28687489 . . 0 22 hPsi_associated_SNPs_6576 0 0 1 0 0 unknown 0.438718589244807 0.438718593238692 0.139838 0 hPsi_site_11993 iPseU_CNN:0.139838;iRNA_PseU:0 11994 chr12 81101573 81101573 1 + A G COAD 81101572 + 81101552 81101592 41 AAATGTTACTCTGCAGCCATTAGAAGTGGCAGAAGGCTCTC AAATGTTACTCTGCAGCCATTGGAAGTGGCAGAAGGCTCTC < 41bp 0.901602924125841 0.591508752025618 0.26785433 0.21793887 prediction 0.620188344200447 Functional Loss - MYF6 ENSG00000111046 CDS Human protein_coding chr12:81101572 chr12:81101573 synonymous SNV . 0 22 hPsi_associated_SNPs_6577 0 0 0 0 0 unknown 0.438718591489328 0.438704877532854 0 0 hPsi_site_11994 iPseU_CNN:0;iRNA_PseU:0 11995 chr7 143827069 143827069 1 + A C CESC 143827068 + 143827048 143827088 41 TCCAATGCTGAACCCCCTGATATATAGCCTAAGGAATGCAG TCCAATGCTGAACCCCCTGATCTATAGCCTAAGGAATGCAG < 41bp 0.842756022745686 0.532682975867735 0.37932813 0.3117226 prediction 0.6201460937559 Functional Loss - OR2A14 ENSG00000221938 CDS Human protein_coding chr7:143827068 chr7:143827069 synonymous SNV . 0 22 hPsi_associated_SNPs_6578 0 0 0 0 0 unknown 0.438718594482858 0.43871859299432 0 0 hPsi_site_11995 iPseU_CNN:0;iRNA_PseU:0 11996 chr14 100748994 100748994 1 + A G rs11427 100748993 + 100748973 100749013 41 ATAGGTCATAGATGCAGAAATATAGTATTTAAGGCATCCGC ATAGGTCATAGATGCAGAAATGTAGTATTTAAGGCATCCGC < 41bp 0.810057848539654 0.441912415750123 0.20530292 0.22981024 prediction 0.620115697079308 Functional Loss - YY1;SLC25A29 ENSG00000259052 ncRNA_intronic Human sense_overlapping chr14:100748993 chr14:100748994 . . 0 22 hPsi_associated_SNPs_6579 0 0 1 0 0 unknown 0.438729182705442 0.438704060764013 0 0 hPsi_site_11996 iPseU_CNN:0;iRNA_PseU:0 11997 chr4 71390657 71390657 1 + A G UCEC 71390656 + 71390636 71390676 41 GACCCTGGGAGGGTTGAATGTACAACAGCAACTGCACCCAC GACCCTGGGAGGGTTGAATGTGCAACAGCAACTGCACCCAC < 41bp 0.810047808426024 0.389636101826057 0.6741984 0.2560521 prediction 0.620095616852049 Functional Loss - AMTN ENSG00000187689 CDS Human protein_coding chr4:71390656 chr4:71390657 synonymous SNV . 0 22 hPsi_associated_SNPs_6580 0 0 0 0 2 unknown 0.438718804303573 0.438718643938454 0.3483968 0 hPsi_site_11997 iPseU_CNN:0.3483968;iRNA_PseU:0 11998 chr1 230384963 230384963 1 + A G COAD 230384962 + 230384942 230384982 41 ACTTGGTATTCAAGTGGGATTACATGACGCCTGAGCAGAGA ACTTGGTATTCAAGTGGGATTGCATGACGCCTGAGCAGAGA < 41bp 0.911879647822496 0.60183955773263 0.45374307 0.3217414 prediction 0.620080180179731 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384962 chr1:230384963 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6581 0 0 1 0 2 Endoplasmic reticulum 0.438719351784169 0.438719463437168 0 0 hPsi_site_11998 iPseU_CNN:0;iRNA_PseU:0 11999 chr7 45932669 45932669 1 + A G rs4619 45932668 + 45932648 45932688 41 GGGAGACCCCAACTGCCAGATATATTTTAATGTACAAAACT GGGAGACCCCAACTGCCAGATGTATTTTAATGTACAAAACT < 41bp 0.902288139275033 0.592270338716816 0.57118845 0.4519986 prediction 0.620035601116433 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45932668 chr7:45932669 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6582 0 0 0 0 0 nucleus 0.438723318174106 0.438731090160052 0.1423769 0 hPsi_site_11999 iPseU_CNN:0.1423769;iRNA_PseU:0 12000 chr11 18373945 18373945 1 + T G UCEC 18373944 + 18373924 18373964 41 TCAGGACATTATTAATTCTTTTCAAAGTATTAGACAAGAAA TCAGGACATTATTAATTCTTTGCAAAGTATTAGACAAGAAA < 41bp 0.844550966929238 0.534561839004012 0.29796726 0.2193912 prediction 0.619978255850452 Functional Loss - GTF2H1 ENSG00000110768 CDS Human protein_coding chr11:18373944 chr11:18373945 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6583 0 0 1 0 2 Cytosol 0.438710479415177 0.439030744019169 0 0 hPsi_site_12000 iPseU_CNN:0;iRNA_PseU:0 12001 chr6 44217213 44217213 1 + A G ACC 44217212 + 44217192 44217232 41 ATCCCCAACCCTCAGGAACGTACCCTGACTTTGGTAGACAC ATCCCCAACCCTCAGGAACGTGCCCTGACTTTGGTAGACAC < 41bp 0.809983801374533 0.402301295553265 0.4606975 0.19688088 prediction 0.619967602749067 Functional Loss - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44217212 chr6:44217213 nonsynonymous SNV 0.297 1 22 hPsi_associated_SNPs_6584 0 0 1 0 1 Nucleus 0.438718563863236 0.438718573054034 0 0 hPsi_site_12001 iPseU_CNN:0;iRNA_PseU:0 12002 chr14 20586234 20586234 1 + A G STAD 20586233 + 20586213 20586253 41 TAAGCTTGCCTGTATAGACATATATTTTGTACAGGTAGTCA TAAGCTTGCCTGTATAGACATGTATTTTGTACAGGTAGTCA < 41bp 0.809966752313369 0.417595815913514 0.21266633 0.17474651 prediction 0.619933504626738 Functional Loss - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586233 chr14:20586234 nonsynonymous SNV 0.449 1 22 hPsi_associated_SNPs_6585 0 0 0 0 0 unknown 0.438679296953535 0.438612851837608 0 0 hPsi_site_12002 iPseU_CNN:0;iRNA_PseU:0 12003 chr7 143882724 143882724 1 + A G UCEC 143882723 + 143882703 143882743 41 GGTCCATTGTTTCCAGTGGATACAAGGGGCCCGTTCATGAG GGTCCATTGTTTCCAGTGGATGCAAGGGGCCCGTTCATGAG < 41bp 0.900745801325041 0.590784214566414 0.7322818 0.36029196 prediction 0.619923173517254 Functional Loss - CTAGE4 ENSG00000225932 CDS Human protein_coding chr7:143882723 chr7:143882724 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_6586 0 0 0 0 0 exosome 0.438718592993405 0.438718592991927 0.4645636 0 hPsi_site_12003 iPseU_CNN:0.4645636;iRNA_PseU:0 12004 chr4 156135353 156135353 1 + T G UCEC 156135352 + 156135332 156135372 41 ATGCGCACAGTAACCAACTTTTTCATTGCCAATCTGGCTGT ATGCGCACAGTAACCAACTTTGTCATTGCCAATCTGGCTGT < 41bp 0.825683742549741 0.515779253257587 0.3150949 0.22068429 prediction 0.619808978584308 Functional Loss - NPY2R ENSG00000185149 CDS Human protein_coding chr4:156135352 chr4:156135353 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6587 0 0 0 0 0 unknown 0.438445368822835 0.439199330212784 0 0 hPsi_site_12004 iPseU_CNN:0;iRNA_PseU:0 12005 chr11 113194093 113194093 1 + A G rs148853643 113194092 + 113194072 113194112 41 ACAGAAAAGAGACTACTGCTTATGGAGGAAGACCAGGAGGA ACAGAAAAGAGACTACTGCTTGTGGAGGAAGACCAGGAGGA < 41bp 0.863300277920543 0.55340380954775 0.6677208 0.23392418 prediction 0.619792936745585 Functional Loss - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113194092 chr11:113194093 nonsynonymous SNV 0.309 0 22 hPsi_associated_SNPs_6588 0 0 0 0 2 cytosol 0.438715483386093 0.438716857407851 0.3354416 0 hPsi_site_12005 iPseU_CNN:0.3354416;iRNA_PseU:0 12006 chrX 27766400 27766400 1 + T G UCEC 27766399 + 27766379 27766419 41 GTGCTCAATACAGTAAGAGATTTAAGGGACACAGAAATAAT GTGCTCAATACAGTAAGAGATGTAAGGGACACAGAAATAAT < 41bp 0.811998696087144 0.502103173147787 0.39574546 0.2844143 prediction 0.619791045878714 Functional Loss - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27766399 chrX:27766400 nonsynonymous SNV 0.442 1 22 hPsi_associated_SNPs_6589 0 0 0 0 0 exosome 0.438728825267813 0.438718598578166 0 0 hPsi_site_12006 iPseU_CNN:0;iRNA_PseU:0 12007 chr15 77776542 77776542 1 + A G rs557397623 77776541 + 77776521 77776561 41 CGGTGGCTATTCACAGATGCTATCATAGCACACTACAGCCT CGGTGGCTATTCACAGATGCTGTCATAGCACACTACAGCCT < 41bp 0.809894268387759 0.419384112238823 0.6769575 0.32628787 prediction 0.619788536775518 Functional Loss - HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77776541 chr15:77776542 . . 0 22 hPsi_associated_SNPs_6590 0 0 1 1 0 Ribosome 0.438721526620293 0.438740830441007 0.353915 0 hPsi_site_12007 iPseU_CNN:0.353915;iRNA_PseU:0 12008 chr17 27047349 27047349 1 + A G rs573745975 27047348 + 27047328 27047368 41 GCTCCATGTCCCCGGGCCTGTAAGGAATTAGTGCCCTCAGC GCTCCATGTCCCCGGGCCTGTGAGGAATTAGTGCCCTCAGC < 41bp 0.809881296881136 0.408590770032845 0.6686622 0.30768323 prediction 0.619762593762271 Functional Loss - RPL23A ENSG00000198242 CDS Human protein_coding chr17:27047348 chr17:27047349 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_6591 0 0 1 0 1 Cytosol 0.438909745716408 0.438702685570871 0.3373244 0 hPsi_site_12008 iPseU_CNN:0.3373244;iRNA_PseU:0 12009 chr7 155094505 155094505 1 + A G KIRC 155094504 + 155094484 155094524 41 TCGTTCTTGGCTCCCTTGTATATTTTTCTCAGGAGGCGTCA TCGTTCTTGGCTCCCTTGTATGTTTTTCTCAGGAGGCGTCA < 41bp 0.91131429233082 0.601451598797156 0.28755617 0.25946444 prediction 0.619725387067327 Functional Loss - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155094504 chr7:155094505 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_6592 0 0 1 0 2 Endoplasmic reticulum 0.438718593000603 0.438718593014207 0 0 hPsi_site_12009 iPseU_CNN:0;iRNA_PseU:0 12010 chr6 47682609 47682609 1 + A G BLCA 47682608 + 47682588 47682628 41 TCACAGAGCCAGAGAAAGGCTACATGAGACCTGAGGCCTGT TCACAGAGCCAGAGAAAGGCTGCATGAGACCTGAGGCCTGT < 41bp 0.809857052252647 0.382770174304588 0.63899297 0.26745296 prediction 0.619714104505295 Functional Loss - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47682608 chr6:47682609 nonsynonymous SNV 0.180 4 22 hPsi_associated_SNPs_6593 0 0 0 0 0 exosome 0.438709576391421 0.438716656613043 0.27798594 0 hPsi_site_12010 iPseU_CNN:0.27798594;iRNA_PseU:0 12011 chr17 8243785 8243785 1 + A G rs12936935 8243784 + 8243764 8243804 41 CCATGGGGCTCCTGCACTTTTACAAATCCAGGAGCTGTTCT CCATGGGGCTCCTGCACTTTTGCAAATCCAGGAGCTGTTCT < 41bp 0.902731791205375 0.592876965247527 0.74360967 0.68048143 prediction 0.619709651915697 Functional Loss - ODF4 ENSG00000184650 CDS Human protein_coding chr17:8243784 chr17:8243785 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_6594 0 0 0 0 1 unknown 0.438718592995102 0.438718592995103 0.12625648 0 hPsi_site_12011 iPseU_CNN:0.12625648;iRNA_PseU:0 12012 chr1 92707847 92707847 1 + A C UCEC 92707846 + 92707826 92707866 41 TCAGTGGAAAATGGATCAATTATATTTTCTCTTTCTGGTAT TCAGTGGAAAATGGATCAATTCTATTTTCTCTTTCTGGTAT < 41bp 0.809850739997471 0.491686421155293 0.32798833 0.24493039 prediction 0.619701479994942 Functional Loss - C1orf146 ENSG00000203910 CDS Human protein_coding chr1:92707846 chr1:92707847 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6595 0 0 0 0 1 unknown 0.439675981678139 0.438585718344081 0 0 hPsi_site_12012 iPseU_CNN:0;iRNA_PseU:0 12013 chr19 45209070 45209070 1 + A G STAD 45209069 + 45209049 45209089 41 CAGCCGCCCAGGAGGGGACGTACACATGTATTGCGAAGAAC CAGCCGCCCAGGAGGGGACGTGCACATGTATTGCGAAGAAC < 41bp 0.809836409477227 0.388653454828711 0.34591633 0.236893 prediction 0.619672818954454 Functional Loss - CEACAM16 ENSG00000213892 CDS Human protein_coding chr19:45209069 chr19:45209070 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_6596 0 0 0 0 1 exosome 0.43874694472766 0.438578221037882 0 0 hPsi_site_12013 iPseU_CNN:0;iRNA_PseU:0 12014 chrX 69722044 69722044 1 + T G UCEC 69722043 + 69722023 69722063 41 GGGTGACTCACTGGAAGAGATTTATAACAAAATCAAACAAA GGGTGACTCACTGGAAGAGATGTATAACAAAATCAAACAAA < 41bp 0.809831931013223 0.488371196962385 0.35085222 0.35340044 prediction 0.619663862026446 Functional Loss - DLG3 ENSG00000082458 CDS Human protein_coding chrX:69722043 chrX:69722044 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6597 0 0 1 0 1 Ribosome 0.438718489657119 0.438717334991946 0 0 hPsi_site_12014 iPseU_CNN:0;iRNA_PseU:0 12015 chr12 4829955 4829955 1 + A G COAD 4829954 + 4829934 4829974 41 GGGACTTTACAAAACCTGTTTACGGGTGGTCTCCACAGGGA GGGACTTTACAAAACCTGTTTGCGGGTGGTCTCCACAGGGA < 41bp 0.903409661100974 0.593579358843659 0.48202664 0.19843909 prediction 0.619660604514629 Functional Loss - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4829954 chr12:4829955 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6598 0 0 0 0 1 cytosol 0.438718592579835 0.438718592995101 0 0 hPsi_site_12015 iPseU_CNN:0;iRNA_PseU:0 12016 chr3 53886944 53886944 1 + A G LUSC 53886943 + 53886923 53886963 41 CTGTAGAGCTGAACACAGTCTATTTCATTGGGGCCCATAAT CTGTAGAGCTGAACACAGTCTGTTTCATTGGGGCCCATAAT < 41bp 0.809821141989447 0.384382072032013 0.23999849 0.21666208 prediction 0.619642283978893 Functional Loss - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53886943 chr3:53886944 nonsynonymous SNV 0.576 4 22 hPsi_associated_SNPs_6599 0 0 1 0 2 Nucleus 0.43869082844314 0.438709251576518 0 0 hPsi_site_12016 iPseU_CNN:0;iRNA_PseU:0 12017 chr9 79014335 79014335 1 + A G rs199649279 79014334 + 79014314 79014354 41 CCAGCTCCTGAGTTCACTGCTACTCAGCCTGAGGTTGCAGA CCAGCTCCTGAGTTCACTGCTGCTCAGCCTGAGGTTGCAGA < 41bp 0.809814953676383 0.428721037203938 0.3480048 0.2806054 prediction 0.619629907352766 Functional Loss - RPSAP9 ENSG00000234618 ncRNA_exonic Human processed_pseudogene chr9:79014334 chr9:79014335 . . 0 22 hPsi_associated_SNPs_6600 0 0 0 0 0 unknown 0.438718581008356 0.438719335793152 0 0 hPsi_site_12017 iPseU_CNN:0;iRNA_PseU:0 12018 chr1 10197176 10197176 1 + T G LUAD 10197175 + 10197155 10197195 41 AATTCCCTACGGAGTGCTTCTTTCTCACCCTGCATGCTCAC AATTCCCTACGGAGTGCTTCTGTCTCACCCTGCATGCTCAC < 41bp 0.862415375197234 0.552606547664786 0.7819016 0.6502658 prediction 0.619617655064897 Functional Loss - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10197175 chr1:10197176 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6601 0 0 1 0 2 Cytosol 0.438723845565239 0.438718251506911 0.2632716 0 hPsi_site_12018 iPseU_CNN:0.2632716;iRNA_PseU:0 12019 chr22 29611518 29611518 1 + A G COAD 29611517 + 29611497 29611537 41 CACCTGGGGACTCTTTCAGCTACAGAACTGTGGTGAGACCC CACCTGGGGACTCTTTCAGCTGCAGAACTGTGGTGAGACCC < 41bp 0.809808458544498 0.383910054928242 0.47749168 0.32276785 prediction 0.619616917088996 Functional Loss - EMID1 ENSG00000186998 CDS Human protein_coding chr22:29611517 chr22:29611518 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6602 0 0 1 0 1 chromatin 0.438707335419645 0.438721005359252 0 0 hPsi_site_12019 iPseU_CNN:0;iRNA_PseU:0 12020 chr17 35300596 35300596 1 + A G rs376915562 35300595 + 35300575 35300615 41 TGGAAAAGGGGGACACGAAATAGGATCCAAATCGGCCTCGA TGGAAAAGGGGGACACGAAATGGGATCCAAATCGGCCTCGA < 41bp 0.809802520456823 0.447142365559873 0.39458895 0.29664397 prediction 0.619605040913646 Functional Loss - LHX1 ENSG00000272191 ncRNA_exonic Human other chr17:35300595 chr17:35300596 . . 0 22 hPsi_associated_SNPs_6603 0 0 0 0 0 exosome 0.438718593314909 0.438721465748259 0 0 hPsi_site_12020 iPseU_CNN:0;iRNA_PseU:0 12021 chr13 25671825 25671825 1 + A G LIHC 25671824 + 25671804 25671844 41 GCTGCTGCTGCTGCTGCAGCTACCCCTGCTGTGCGCACGGT GCTGCTGCTGCTGCTGCAGCTGCCCCTGCTGTGCGCACGGT < 41bp 0.90484301120545 0.595043388527649 0.5320218 0.3085602 prediction 0.619599245355601 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671824 chr13:25671825 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_6604 0 0 0 0 0 Cytosol 0.44133473758179 0.438843096418338 0.0640436 0 hPsi_site_12021 iPseU_CNN:0.0640436;iRNA_PseU:0 12022 chr2 187506265 187506265 1 + T G UCEC 187506264 + 187506244 187506284 41 GATTTGAGGTCTTTGCACGGTTTGGCAGTGCCATAGCTCCT GATTTGAGGTCTTTGCACGGTGTGGCAGTGCCATAGCTCCT < 41bp 0.809790789700378 0.472406918030743 0.35457364 0.3042125 prediction 0.619581579400756 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187506264 chr2:187506265 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_6605 0 0 1 0 1 Endoplasmic reticulum 0.438718596579402 0.438321943851798 0 0 hPsi_site_12022 iPseU_CNN:0;iRNA_PseU:0 12023 chr18 59932002 59932002 1 + A G UCEC 59932001 + 59931981 59932021 41 ATAGTTGGCAAAATTAATGTTACTTCAACTGCCTGTGTCCA ATAGTTGGCAAAATTAATGTTGCTTCAACTGCCTGTGTCCA < 41bp 0.809783923511187 0.385800374026992 0.4643607 0.28593248 prediction 0.619567847022374 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59932001 chr18:59932002 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6606 0 0 1 0 2 Cytosol 0.438704886314221 0.438612951141384 0 0 hPsi_site_12023 iPseU_CNN:0;iRNA_PseU:0 12024 chr2 218999865 218999865 1 + T G UCEC 218999864 + 218999844 218999884 41 CCAAGGTGAATGGCTGGATTTTTGGCACATTCCTGTGCAAG CCAAGGTGAATGGCTGGATTTGTGGCACATTCCTGTGCAAG < 41bp 0.842515392012331 0.532747452568713 0.7023734 0.49575874 prediction 0.619535878887235 Functional Loss - CXCR2 ENSG00000180871 CDS Human protein_coding chr2:218999864 chr2:218999865 nonsynonymous SNV 0.867 4 22 hPsi_associated_SNPs_6607 0 0 0 0 0 exosome 0.438698786321962 0.438658494343117 0.4047468 0 hPsi_site_12024 iPseU_CNN:0.4047468;iRNA_PseU:0 12025 chr11 65124504 65124504 1 + A G UCEC 65124503 + 65124483 65124523 41 GAGCCAAGGTCTGGAGTATGTAAGGAGGAGATAGGCACTGA GAGCCAAGGTCTGGAGTATGTGAGGAGGAGATAGGCACTGA < 41bp 0.809757091725414 0.39367359972662 0.39360437 0.25701982 prediction 0.619514183450828 Functional Loss - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65124503 chr11:65124504 nonsynonymous SNV 0.904 0 22 hPsi_associated_SNPs_6608 0 0 1 0 0 Endoplasmic reticulum 0.438718639271403 0.438717058773112 0 0 hPsi_site_12025 iPseU_CNN:0;iRNA_PseU:0 12026 chr6 170627219 170627219 1 + A G LUAD 170627218 + 170627198 170627238 41 AAGCTTTAGGTACAAATGCTTATCGTCCTACACCTCTGTAA AAGCTTTAGGTACAAATGCTTGTCGTCCTACACCTCTGTAA < 41bp 0.809725280461084 0.389751246880395 0.4190853 0.23139939 prediction 0.619450560922169 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627218 chr6:170627219 synonymous SNV . 0 22 hPsi_associated_SNPs_6609 0 0 1 0 0 Cytosol 0.438719122214632 0.438718985245675 0 0 hPsi_site_12026 iPseU_CNN:0;iRNA_PseU:0 12027 chr12 34178864 34178864 1 + T G UCEC 34178863 + 34178843 34178883 41 GTATTTCCAACACTTTATTTTTTTAACTTCCTTTATTATAC GTATTTCCAACACTTTATTTTGTTAACTTCCTTTATTATAC < 41bp 0.809717408363647 0.498383031257212 0.45393533 0.33877236 prediction 0.619434816727293 Functional Loss - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34178863 chr12:34178864 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6610 0 0 1 0 1 Ribosome 0.438706387423106 0.438747768974137 0 0 hPsi_site_12027 iPseU_CNN:0;iRNA_PseU:0 12028 chr20 2843550 2843550 1 + A G LUAD 2843549 + 2843529 2843569 41 TGCTCAATGCTGTTCGGGACTATCACATCGGGATCCCGCTC TGCTCAATGCTGTTCGGGACTGTCACATCGGGATCCCGCTC < 41bp 0.809710157979372 0.385099722192164 0.79466647 0.61532736 prediction 0.619420315958743 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2843549 chr20:2843550 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6611 0 0 1 0 2 chromatin 0.43829872765659 0.438474809985979 0.35867822 0 hPsi_site_12028 iPseU_CNN:0.35867822;iRNA_PseU:0 12029 chr1 44437102 44437102 1 + A G LUAD 44437101 + 44437081 44437121 41 CCCACGGTACCTGGACCTGCTAGTCTCCAGCCCAGCTTTTC CCCACGGTACCTGGACCTGCTGGTCTCCAGCCCAGCTTTTC < 41bp 0.809707587733104 0.378497803758183 0.37938005 0.1420747 prediction 0.619415175466207 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437101 chr1:44437102 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_6612 0 0 1 0 1 nucleolus 0.438633813803826 0.440158581168778 0 0 hPsi_site_12029 iPseU_CNN:0;iRNA_PseU:0 12030 chr15 75189930 75189930 1 + A G rs1130741 75189929 + 75189909 75189949 41 CCTGATGGTACAGGGGACAGTAATAGCCAGCACACCCACAA CCTGATGGTACAGGGGACAGTGATAGCCAGCACACCCACAA < 41bp 0.809705259525939 0.385550383089034 0.5513772 0.24218649 prediction 0.619410519051879 Functional Loss - MPI ENSG00000178802 CDS Human protein_coding chr15:75189929 chr15:75189930 synonymous SNV . 0 22 hPsi_associated_SNPs_6613 2 0 0 0 1 Ribosome 0.438707986809937 0.438718536521414 0.1027544 0 hPsi_site_12030 iPseU_CNN:0.1027544;iRNA_PseU:0 12031 chr13 103451465 103451465 1 + A G rs567922278 103451464 + 103451444 103451484 41 GCGCCCCGGGCTCCCTGGGATATGTAGTTCGCGACAGGACG GCGCCCCGGGCTCCCTGGGATGTGTAGTTCGCGACAGGACG < 41bp 0.809704827828036 0.430896846231681 0.31242394 0.3582183 prediction 0.619409655656071 Functional Loss - BIVM ENSG00000134897 UTR5 Human protein_coding chr13:103451464 chr13:103451465 . . 0 22 hPsi_associated_SNPs_6614 0 0 0 0 0 Ribosome 0.438720830856857 0.438718385606677 0 0 hPsi_site_12031 iPseU_CNN:0;iRNA_PseU:0 12032 chrX 70389880 70389880 1 + A C BRCA 70389879 + 70389859 70389899 41 GGCTGCAGACATTGCACCCCTATAACACCTTTGCCGCAGGG GGCTGCAGACATTGCACCCCTCTAACACCTTTGCCGCAGGG < 41bp 0.878786382615539 0.569109269621678 0.29284582 0.2715369 prediction 0.619354225987722 Functional Loss - NLGN3 ENSG00000196338 CDS Human protein_coding chrX:70389879 chrX:70389880 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6615 0 0 1 0 0 exosome 0.438718611268496 0.438718548545062 0 0 hPsi_site_12032 iPseU_CNN:0;iRNA_PseU:0 12033 chr11 9606888 9606888 1 + A C rs34883479 9606887 + 9606867 9606907 41 GATTGGGCATCCAACAAAGTTATGTTTAAAATAGGTAAGAA GATTGGGCATCCAACAAAGTTCTGTTTAAAATAGGTAAGAA < 41bp 0.853061529269851 0.543396487209837 0.27395135 0.24302527 prediction 0.619330084120027 Functional Loss - WEE1 ENSG00000166483 CDS Human protein_coding chr11:9606887 chr11:9606888 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6616 0 0 1 0 2 Ribosome 0.438718592995035 0.438718592993932 0 0 hPsi_site_12033 iPseU_CNN:0;iRNA_PseU:0 12034 chr2 109492577 109492577 1 + T G UCEC 109492576 + 109492556 109492596 41 GCTCTTTGAACTTTTTACGATTCATCTGATGCTTCAAGAAA GCTCTTTGAACTTTTTACGATGCATCTGATGCTTCAAGAAA < 41bp 0.827882629141233 0.51821849422548 0.2768252 0.2805335 prediction 0.619328269831506 Functional Loss - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109492576 chr2:109492577 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_6617 0 0 1 0 1 chromatin 0.438710565897462 0.4387188696399 0 0 hPsi_site_12034 iPseU_CNN:0;iRNA_PseU:0 12035 chr20 30797967 30797967 1 + A G COAD 30797966 + 30797946 30797986 41 CTGTCCCTCCTTGGATTGAGTACCAGCATCACAAGCCTCCT CTGTCCCTCCTTGGATTGAGTGCCAGCATCACAAGCCTCCT < 41bp 0.809663648290541 0.38448054623649 0.5650902 0.24394053 prediction 0.619327296581082 Functional Loss - POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30797966 chr20:30797967 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_6618 0 0 1 0 2 Endoplasmic reticulum 0.438705571814078 0.438716011488331 0.1301804 0 hPsi_site_12035 iPseU_CNN:0.1301804;iRNA_PseU:0 12036 chr11 4615459 4615459 1 + A C UCEC 4615458 + 4615438 4615478 41 CCACTCGGCATGAGCCCATGTATTGCTTTCTGTGTGTTCTG CCACTCGGCATGAGCCCATGTCTTGCTTTCTGTGTGTTCTG < 41bp 0.809645786758986 0.449127938515585 0.3954431 0.2799239 prediction 0.619291573517972 Functional Loss - OR52I1 ENSG00000232268 CDS Human protein_coding chr11:4615458 chr11:4615459 nonsynonymous SNV 0.181 3 22 hPsi_associated_SNPs_6619 0 0 0 0 0 unknown 0.438706365903814 0.438755208301805 0 0 hPsi_site_12036 iPseU_CNN:0;iRNA_PseU:0 12037 chr8 73921176 73921176 1 + A G STAD 73921175 + 73921155 73921195 41 CCGCGGGGCTGTGCGGATGGTAGGGATGCCGACCCTACTGA CCGCGGGGCTGTGCGGATGGTGGGGATGCCGACCCTACTGA < 41bp 0.809633003017545 0.404342969332136 0.58030725 0.23973289 prediction 0.61926600603509 Functional Loss - TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921175 chr8:73921176 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_6620 0 0 1 1 0 Nucleus 0.438718592433935 0.438710767476967 0.1606145 0 hPsi_site_12037 iPseU_CNN:0.1606145;iRNA_PseU:0 12038 chr3 131080830 131080830 1 + A G rs12637639 131080829 + 131080809 131080849 41 CCCTGGCGCTGGGGCCAGGCTAGAGGCATGCCTGCTATGCG CCCTGGCGCTGGGGCCAGGCTGGAGGCATGCCTGCTATGCG < 41bp 0.897142335917596 0.587511424928479 0.8246764 0.39972964 prediction 0.619261821978236 Functional Loss - NUDT16P1 ENSG00000246082 ncRNA_exonic Human transcribed_unitary_pseudogene chr3:131080829 chr3:131080830 . . 0 22 hPsi_associated_SNPs_6621 0 0 1 0 1 unknown 0.438718592576903 0.438718593328509 0.6493528 0 hPsi_site_12038 iPseU_CNN:0.6493528;iRNA_PseU:0 12039 chr1 26582109 26582109 1 + A G STAD 26582108 + 26582088 26582128 41 CCAGCACAAGTAAGGAGTTGTACAGAGTGTTGCCTGAGGCC CCAGCACAAGTAAGGAGTTGTGCAGAGTGTTGCCTGAGGCC < 41bp 0.809628263163963 0.373322791040963 0.33401027 0.27525145 prediction 0.619256526327926 Functional Loss - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26582108 chr1:26582109 nonsynonymous SNV 0.936 4 22 hPsi_associated_SNPs_6622 0 0 1 0 0 Nucleus 0.43872383662347 0.43871859930252 0 0 hPsi_site_12039 iPseU_CNN:0;iRNA_PseU:0 12040 chr16 106559 106559 1 + A G UCEC 106558 + 106538 106578 41 GGTCCTACGTGTGGAGGACGTACCATCTGACCTCTGCAGGA GGTCCTACGTGTGGAGGACGTGCCATCTGACCTCTGCAGGA < 41bp 0.914977326600238 0.605387232528761 0.48110187 0.20827535 prediction 0.619180188142955 Functional Loss - SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:106558 chr16:106559 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6623 0 0 1 1 1 Ribosome 0.438641182899685 0.438718526964116 0 0 hPsi_site_12040 iPseU_CNN:0;iRNA_PseU:0 12041 chr11 22399016 22399016 1 + T G UCEC 22399015 + 22398995 22399035 41 CCACTATGGTGGAGTTATATTTTATGCAATATTTGCCTCAG CCACTATGGTGGAGTTATATTGTATGCAATATTTGCCTCAG < 41bp 0.828344669325592 0.518755415846929 0.27873653 0.22817141 prediction 0.619178506957326 Functional Loss - SLC17A6 ENSG00000091664 CDS Human protein_coding chr11:22399015 chr11:22399016 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6624 0 0 0 0 1 unknown 0.438718410445617 0.438676388738739 0 0 hPsi_site_12041 iPseU_CNN:0;iRNA_PseU:0 12042 chr3 15480755 15480755 1 + A G rs9835495 15480754 + 15480734 15480774 41 CCATTGCAAGAGGAAAATGTTATGGATCAGTGACTGTAGTA CCATTGCAAGAGGAAAATGTTGTGGATCAGTGACTGTAGTA < 41bp 0.809576393222778 0.432922548158479 0.34160787 0.30236733 prediction 0.619152786445556 Functional Loss - EAF1 ENSG00000249786 ncRNA_exonic Human antisense chr3:15480754 chr3:15480755 . . 0 22 hPsi_associated_SNPs_6625 0 0 1 2 0 Ribosome 0.438718543216749 0.438718623764509 0 0 hPsi_site_12042 iPseU_CNN:0;iRNA_PseU:0 12043 chr3 71804099 71804099 1 + A G BRCA 71804098 + 71804078 71804118 41 TCCTGCTCCTCTGGGGGCCCTACGTCGTGGCCAGCTACCTG TCCTGCTCCTCTGGGGGCCCTGCGTCGTGGCCAGCTACCTG < 41bp 0.878749202956964 0.569180720329998 0.38973227 0.16585994 prediction 0.619136965253932 Functional Loss - GPR27 ENSG00000170837 CDS Human protein_coding chr3:71804098 chr3:71804099 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6626 0 0 1 0 0 exosome 0.438718599370142 0.438718709234879 0 0 hPsi_site_12043 iPseU_CNN:0;iRNA_PseU:0 12044 chr16 82131750 82131750 1 + A G UCEC 82131749 + 82131729 82131769 41 GGACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGG GGACCACCTCCCCGCTGAGGTGCAGGAAGACTACGGCCAGG < 41bp 0.905827150676396 0.596267423049076 0.6531359 0.22949621 prediction 0.619119455254639 Functional Loss - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82131749 chr16:82131750 synonymous SNV . 0 22 hPsi_associated_SNPs_6627 0 0 1 0 1 nucleus 0.438743262043449 0.438705097596568 0.3062718 0 hPsi_site_12044 iPseU_CNN:0.3062718;iRNA_PseU:0 12045 chr1 18152626 18152626 1 + A G STAD 18152625 + 18152605 18152645 41 CCTTGGATGAGAGCAACACCTATCAGCTCCCAGACGGCTCC CCTTGGATGAGAGCAACACCTGTCAGCTCCCAGACGGCTCC < 41bp 0.90442437228238 0.594865858908495 0.32056916 0.31779528 prediction 0.619117026747769 Functional Loss - ACTL8 ENSG00000117148 CDS Human protein_coding chr1:18152625 chr1:18152626 nonsynonymous SNV 0.886 2 22 hPsi_associated_SNPs_6628 0 0 0 0 0 unknown 0.438756918133629 0.438746739964498 0 0 hPsi_site_12045 iPseU_CNN:0;iRNA_PseU:0 12046 chr3 3887497 3887497 1 + T G UCEC 3887496 + 3887476 3887516 41 CCAACAAAACCAACATCCGCTTCATGGAGCCCCTGTCCATG CCAACAAAACCAACATCCGCTGCATGGAGCCCCTGTCCATG < 41bp 0.809546267723118 0.483152380007341 0.7003613 0.3072962 prediction 0.619092535446236 Functional Loss - LRRN1 ENSG00000175928 CDS Human protein_coding chr3:3887496 chr3:3887497 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6629 0 0 0 0 0 Cytosol 0.438725223943104 0.438718481585983 0.4007226 0 hPsi_site_12046 iPseU_CNN:0.4007226;iRNA_PseU:0 12047 chr19 35610312 35610312 1 + T G BRCA 35610311 + 35610291 35610331 41 TGACCCTGGGCCTGCTTGTGTTCCTGGCAGGTGAGTACCCA TGACCCTGGGCCTGCTTGTGTGCCTGGCAGGTGAGTACCCA < 41bp 0.809532945900796 0.491889248311595 0.25856465 0.25065005 prediction 0.619065891801591 Functional Loss - FXYD3 ENSG00000089356 CDS Human protein_coding chr19:35610311 chr19:35610312 nonsynonymous SNV 0.359 2 22 hPsi_associated_SNPs_6630 0 0 0 0 2 Ribosome 0.438718601195968 0.438718842583247 0 0 hPsi_site_12047 iPseU_CNN:0;iRNA_PseU:0 12048 chr8 11189430 11189430 1 + A C LUSC 11189429 + 11189409 11189449 41 TCTCCTTCACATGTGTGGGCTATGCGGTCACCAAGGCCCAC TCTCCTTCACATGTGTGGGCTCTGCGGTCACCAAGGCCCAC < 41bp 0.868711628520279 0.559184948805157 0.70743644 0.35041642 prediction 0.619053359430243 Functional Loss - SLC35G5 ENSG00000177710 CDS Human protein_coding chr8:11189429 chr8:11189430 nonsynonymous SNV 0.099 3 22 hPsi_associated_SNPs_6631 0 0 0 0 0 exosome 0.438096097486064 0.438720803521162 0.41487288 0 hPsi_site_12048 iPseU_CNN:0.41487288;iRNA_PseU:0 12049 chr1 2415924 2415924 1 + T G LGG 2415923 + 2415903 2415943 41 ACCACCAAGGGACGCTGGGTTTTGAAGAGTTCTGTGCCTTC ACCACCAAGGGACGCTGGGTTGTGAAGAGTTCTGTGCCTTC < 41bp 0.831080493956671 0.521559225295092 0.70521635 0.32458395 prediction 0.619042537323158 Functional Loss - PLCH2 ENSG00000149527 CDS Human protein_coding chr1:2415923 chr1:2415924 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_6632 0 0 0 0 1 nucleus 0.438718593052248 0.438718605269207 0.4104327 0 hPsi_site_12049 iPseU_CNN:0.4104327;iRNA_PseU:0 12050 chr2 191235970 191235970 1 + T G UCEC 191235969 + 191235949 191235989 41 AATCCAGAAACAGGGCTTGATTTGCCACAGTTGGTGTACCA AATCCAGAAACAGGGCTTGATGTGCCACAGTTGGTGTACCA < 41bp 0.834083136746429 0.524569246129678 0.3890445 0.33818507 prediction 0.619027781233502 Functional Loss - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191235969 chr2:191235970 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_6633 0 0 0 0 0 exosome 0.43471088552076 0.439110979881488 0 0 hPsi_site_12050 iPseU_CNN:0;iRNA_PseU:0 12051 chr5 110434486 110434486 1 + A G ESCA 110434485 + 110434465 110434505 41 CAACCCTTTGGAGACCACATTATCTCTGTTGATACTGATGG CAACCCTTTGGAGACCACATTGTCTCTGTTGATACTGATGG < 41bp 0.809507825522894 0.400714842542732 0.2857627 0.25939906 prediction 0.619015651045788 Functional Loss - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110434485 chr5:110434486 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6634 0 0 1 0 2 Nucleus 0.438018853717994 0.438006367542536 0 0 hPsi_site_12051 iPseU_CNN:0;iRNA_PseU:0 12052 chr1 210016929 210016929 1 + A G rs61739641 210016928 + 210016908 210016948 41 AAGAAGGAGGAATTGAATTTTACCCACATCTGCGAGTACAC AAGAAGGAGGAATTGAATTTTGCCCACATCTGCGAGTACAC < 41bp 0.905918479958924 0.596430389516301 0.37593448 0.2454871 prediction 0.618976180885245 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210016928 chr1:210016929 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_6635 0 0 0 0 0 Cytosol 0.438065108986072 0.438471993345265 0 0 hPsi_site_12052 iPseU_CNN:0;iRNA_PseU:0 12053 chr8 30989948 30989948 1 + A G UCEC 30989947 + 30989927 30989967 41 GACTTTGGTCCACAAGCATTTAAGCTTTTGTCTGCTGTGGA GACTTTGGTCCACAAGCATTTGAGCTTTTGTCTGCTGTGGA < 41bp 0.809487410915758 0.376575754739674 0.42196888 0.2591896 prediction 0.618974821831516 Functional Loss - WRN ENSG00000165392 CDS Human protein_coding chr8:30989947 chr8:30989948 nonsynonymous SNV 0.865 0 22 hPsi_associated_SNPs_6636 0 0 1 0 2 Cytosol 0.439509810683006 0.444873002617549 0 0 hPsi_site_12053 iPseU_CNN:0;iRNA_PseU:0 12054 chr17 15641610 15641610 1 + A G ACC 15641609 + 15641589 15641629 41 TGTAGCTGTCTCAAAGAGTATACAAAGTCATTCCCCTGGCG TGTAGCTGTCTCAAAGAGTATGCAAAGTCATTCCCCTGGCG < 41bp 0.809481707134461 0.383010051970842 0.83861375 0.46137917 prediction 0.618963414268922 Functional Loss - TBC1D26 ENSG00000214946 CDS Human protein_coding chr17:15641609 chr17:15641610 nonsynonymous SNV 0.009 3 22 hPsi_associated_SNPs_6637 0 0 0 0 2 exosome 0.438718592665039 0.438718592969163 0.6772275 0 hPsi_site_12054 iPseU_CNN:0.6772275;iRNA_PseU:0 12055 chr8 6614805 6614805 1 + T G STAD 6614804 + 6614784 6614824 41 TCAATGTTGATCTTAAGTGGTTTGACTGCAGGCATGCTTAT TCAATGTTGATCTTAAGTGGTGTGACTGCAGGCATGCTTAT < 41bp 0.833576856179078 0.524096373484074 0.5203285 0.23459384 prediction 0.618960965390007 Functional Loss - AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6614804 chr8:6614805 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_6638 0 0 1 1 0 Endoplasmic reticulum 0.438956611048248 0.438743620974925 0.0406569999999999 0 hPsi_site_12055 iPseU_CNN:0.0406569999999999;iRNA_PseU:0 12056 chr1 202987667 202987667 1 + T G UCEC 202987666 + 202987646 202987686 41 GACAGGAACCAATGTGGGAATTCAACTTCAAGTTCAAAAAA GACAGGAACCAATGTGGGAATGCAACTTCAAGTTCAAAAAA < 41bp 0.809478112775784 0.48080612318478 0.7629696 0.36582983 prediction 0.618956225551569 Functional Loss - TMEM183A;TMEM183B ENSG00000163444 CDS Human protein_coding chr1:202987666 chr1:202987667 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6639 0 0 0 0 2 unknown 0.438718592416138 0.43871859297517 0.5259392 0 hPsi_site_12056 iPseU_CNN:0.5259392;iRNA_PseU:0 12057 chr12 21661410 21661410 1 + T G COAD 21661409 + 21661389 21661429 41 AAAATGAAAGCTACAGGTTTTTTTCTGGGTGGTGTATTTGT AAAATGAAAGCTACAGGTTTTGTTCTGGGTGGTGTATTTGT < 41bp 0.813609577875233 0.504144011956454 0.38620725 0.6422385 prediction 0.618931131837559 Functional Loss - GOLT1B ENSG00000111711 CDS Human protein_coding chr12:21661409 chr12:21661410 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6640 0 0 1 1 2 Ribosome 0.438726764370953 0.438898419913048 0 0 hPsi_site_12057 iPseU_CNN:0;iRNA_PseU:0 12058 chr2 217364099 217364099 1 + A C UCEC 217364098 + 217364078 217364118 41 AAATCAGCCAGCACGCCAAGTACACTTGCTCTTTCTGTGGC AAATCAGCCAGCACGCCAAGTCCACTTGCTCTTTCTGTGGC < 41bp 0.837391710107235 0.527927143350452 0.61315536 0.22819051 prediction 0.618929133513565 Functional Loss - RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364098 chr2:217364099 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6641 0 0 1 0 1 Cytosol 0.442940022819689 0.441286851766092 0.22631072 0 hPsi_site_12058 iPseU_CNN:0.22631072;iRNA_PseU:0 12059 chr20 44463723 44463723 1 + A G COAD 44463722 + 44463702 44463742 41 CTCTTCGAAGTGACCAGCGCTAACGTTGTCAAGGACCCGCC CTCTTCGAAGTGACCAGCGCTGACGTTGTCAAGGACCCGCC < 41bp 0.809457412676985 0.439099667722673 0.35307914 0.28305256 prediction 0.61891482535397 Functional Loss - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44463722 chr20:44463723 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_6642 0 0 1 0 2 Ribosome 0.438676219580909 0.438535021841629 0 0 hPsi_site_12059 iPseU_CNN:0;iRNA_PseU:0 12060 chr1 224190059 224190059 1 + A G rs184202773 224190058 + 224190038 224190078 41 AGATTGGCATACTATTTGTATATATGCTTTTCTTTCAAATA AGATTGGCATACTATTTGTATGTATGCTTTTCTTTCAAATA < 41bp 0.809439356402693 0.445308851684386 0.6785457 0.49399877 prediction 0.618878712805386 Functional Loss - LOC100287497 ENSG00000185495;ENSG00000243000 ncRNA_intronic Human other chr1:224190058 chr1:224190059 . . 0 22 hPsi_associated_SNPs_6643 0 0 0 0 0 unknown 0.437905969004362 0.438434436479496 0.3570914 0 hPsi_site_12060 iPseU_CNN:0.3570914;iRNA_PseU:0 12061 chr11 15222416 15222416 1 + T G HNSC 15222415 + 15222395 15222435 41 AGGTTTGCCGGCAGGACAGTTTCCGGTGCTTGTACCCCCAG AGGTTTGCCGGCAGGACAGTTGCCGGTGCTTGTACCCCCAG < 41bp 0.809419272162251 0.466899145703893 0.7201209 0.34209815 prediction 0.618838544324502 Functional Loss - INSC ENSG00000188487 CDS Human protein_coding chr11:15222415 chr11:15222416 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_6644 0 0 0 0 2 exosome 0.439389781216564 0.438414272117097 0.4402418 0 hPsi_site_12061 iPseU_CNN:0.4402418;iRNA_PseU:0 12062 chr4 146601498 146601498 1 + A G UCEC 146601497 + 146601477 146601517 41 CAGATTCTTCCGTGACAACATACACAGGCAGTTACCGGAAA CAGATTCTTCCGTGACAACATGCACAGGCAGTTACCGGAAA < 41bp 0.809392758094572 0.403811178823959 0.1942882 0.21393216 prediction 0.618785516189144 Functional Loss - C4orf51 ENSG00000237136 CDS Human protein_coding chr4:146601497 chr4:146601498 nonsynonymous SNV 0.021 3 22 hPsi_associated_SNPs_6645 0 0 0 0 1 unknown 0.438413993233093 0.43881240388884 0 0 hPsi_site_12062 iPseU_CNN:0;iRNA_PseU:0 12063 chr7 130007780 130007780 1 + T C STAD 130007781 - 130007761 130007801 41 ACTCGATCCCATGGACCTTATACAAGGCCTCCACCGCATCC ACTCGATCCCATGGACCTTATGCAAGGCCTCCACCGCATCC < 41bp 0.8959706517339 0.58658077221565 0.6582294 0.5044432 prediction 0.618779759036501 Functional Loss - CPA5 ENSG00000158525 CDS Human protein_coding chr7:130007781 chr7:130007780 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_6646 0 0 0 0 0 exosome 0.438719217640996 0.438718599499422 0.3075724 0 hPsi_site_12063 iPseU_CNN:0.3075724;iRNA_PseU:0 12064 chr19 33233712 33233712 1 + A G UCEC 33233711 + 33233691 33233731 41 CGAGTTGTAGTAGAATCGTTTATGCAGCTTCCCTATAGAGC CGAGTTGTAGTAGAATCGTTTGTGCAGCTTCCCTATAGAGC < 41bp 0.809379743154852 0.386398305754476 0.6108244 0.33896145 prediction 0.618759486309705 Functional Loss - TDRD12 ENSG00000173809 CDS Human protein_coding chr19:33233711 chr19:33233712 nonsynonymous SNV 0.512 0 22 hPsi_associated_SNPs_6647 0 0 0 0 2 exosome 0.438737328524674 0.438968448545149 0.2216488 0 hPsi_site_12064 iPseU_CNN:0.2216488;iRNA_PseU:0 12065 chr19 56473475 56473475 1 + A C HNSC 56473474 + 56473454 56473494 41 GCATCGTTGGTGGCAAGACTTATGCTCTGTGTTTGCAACGA GCATCGTTGGTGGCAAGACTTCTGCTCTGTGTTTGCAACGA < 41bp 0.880905966906142 0.571548172948455 0.518899 0.41192538 prediction 0.618715587915375 Functional Loss - NLRP8 ENSG00000179709 CDS Human protein_coding chr19:56473474 chr19:56473475 nonsynonymous SNV 0.668 1 22 hPsi_associated_SNPs_6648 0 0 0 0 1 unknown 0.438736301059011 0.43881135567997 0.037798 0 hPsi_site_12065 iPseU_CNN:0.037798;iRNA_PseU:0 12066 chrX 102587194 102587194 1 + A G rs144095011 102587193 + 102587173 102587213 41 AGAAGCGTAAAAATGAAATGTAAACCTCCAATTACCTCTGG AGAAGCGTAAAAATGAAATGTGAACCTCCAATTACCTCTGG < 41bp 0.838745262113811 0.529400594334859 0.30967638 0.24232236 prediction 0.618689335557903 Functional Loss - TCEAL7 ENSG00000182916 UTR3 Human protein_coding chrX:102587193 chrX:102587194 . . 0 22 hPsi_associated_SNPs_6649 0 0 0 1 0 exosome 0.438709229893301 0.438718580480536 0 0 hPsi_site_12066 iPseU_CNN:0;iRNA_PseU:0 12067 chr15 93007503 93007503 1 + A G STAD 93007502 + 93007482 93007522 41 ATGACAGCCTCAAGTATGGCTACACCTCCCAGGCCAGCCCG ATGACAGCCTCAAGTATGGCTGCACCTCCCAGGCCAGCCCG < 41bp 0.90211179965401 0.592786405711485 0.7223293 0.30711088 prediction 0.618650787885049 Functional Loss - ST8SIA2 ENSG00000140557 CDS Human protein_coding chr15:93007502 chr15:93007503 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6650 0 0 0 0 0 Nucleus 0.438718591849424 0.438718591957819 0.4446586 0 hPsi_site_12067 iPseU_CNN:0.4446586;iRNA_PseU:0 12068 chr18 12724536 12724536 1 + T G STAD 12724535 + 12724515 12724555 41 AAATGGCAGTTCTGCTGAAATTTGTTTCAGAAGGGGACAAC AAATGGCAGTTCTGCTGAAATGTGTTTCAGAAGGGGACAAC < 41bp 0.809317644279319 0.481964660178812 0.24150789 0.17713106 prediction 0.618635288558638 Functional Loss - PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12724535 chr18:12724536 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6651 0 0 1 0 2 Ribosome 0.438718518349864 0.43871808919756 0 0 hPsi_site_12068 iPseU_CNN:0;iRNA_PseU:0 12069 chr16 76461428 76461428 1 + T G STAD 76461427 + 76461407 76461447 41 TCAAAGCCAGATTTCTGCGCTTCATCCCTTTGGAATGGAAC TCAAAGCCAGATTTCTGCGCTGCATCCCTTTGGAATGGAAC < 41bp 0.809311519835376 0.4762898376445 0.3428644 0.39688197 prediction 0.618623039670752 Functional Loss - CNTNAP4 ENSG00000152910 CDS Human protein_coding chr16:76461427 chr16:76461428 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6652 0 0 0 0 1 exosome 0.438642748491129 0.438718519894876 0 0 hPsi_site_12069 iPseU_CNN:0;iRNA_PseU:0 12070 chr13 113718663 113718663 1 + A G rs74949017 113718662 + 113718642 113718682 41 GACTTACACGGTTACATCGATAAGTCGCAGCTGACCGAGGA GACTTACACGGTTACATCGATGAGTCGCAGCTGACCGAGGA < 41bp 0.809284039855008 0.382935189282928 0.6168677 0.30693036 prediction 0.618568079710016 Functional Loss - MCF2L ENSG00000126217 CDS Human protein_coding chr13:113718662 chr13:113718663 nonsynonymous SNV 0.898 2 22 hPsi_associated_SNPs_6653 0 0 1 0 2 Cytosol 0.438564639446764 0.442345024547889 0.2337354 0 hPsi_site_12070 iPseU_CNN:0.2337354;iRNA_PseU:0 12071 chr18 23906992 23906992 1 + A G UCEC 23906991 + 23906971 23907011 41 TTTCCCAGGCAAGTGAAAATTACATCCTGTGTAGTGATACC TTTCCCAGGCAAGTGAAAATTGCATCCTGTGTAGTGATACC < 41bp 0.809283114679887 0.402687687266868 0.5354527 0.33011955 prediction 0.618566229359773 Functional Loss - TAF4B ENSG00000141384 CDS Human protein_coding chr18:23906991 chr18:23906992 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_6654 0 0 1 0 1 chromatin 0.438718592995311 0.438718593468575 0.0709054 0 hPsi_site_12071 iPseU_CNN:0.0709054;iRNA_PseU:0 12072 chr1 3542403 3542403 1 + A G SKCM 3542402 + 3542382 3542422 41 GCGGATAGCGCTCAACGCAGTAGACACCATTTCCTACGGAG GCGGATAGCGCTCAACGCAGTGGACACCATTTCCTACGGAG < 41bp 0.908495345379132 0.599212554712427 0.40683436 0.25441462 prediction 0.618565581333411 Functional Loss - TPRG1L ENSG00000158109 CDS Human protein_coding chr1:3542402 chr1:3542403 synonymous SNV . 0 22 hPsi_associated_SNPs_6655 0 0 1 0 1 Ribosome 0.438742388165526 0.438707308250055 0 0 hPsi_site_12072 iPseU_CNN:0;iRNA_PseU:0 12073 chr1 152760324 152760324 1 + A G rs148056685 152760323 + 152760303 152760343 41 GGAACTCCAAAGCACACACCTACTTCCTCCCCAGCTCACGC GGAACTCCAAAGCACACACCTGCTTCCTCCCCAGCTCACGC < 41bp 0.809269870598167 0.438631339428809 0.33624014 0.22911134 prediction 0.618539741196334 Functional Loss - LCE1E ENSG00000186226 UTR3 Human protein_coding chr1:152760323 chr1:152760324 . . 0 22 hPsi_associated_SNPs_6656 0 0 0 0 0 unknown 0.438718362823543 0.438718593102532 0 0 hPsi_site_12073 iPseU_CNN:0;iRNA_PseU:0 12074 chr10 134941910 134941910 1 + A G UCS 134941909 + 134941889 134941929 41 TCACCCTGGTCACCTGTGTGTACTTCCTGGGCACCTACGTG TCACCCTGGTCACCTGTGTGTGCTTCCTGGGCACCTACGTG < 41bp 0.809262372143669 0.395537926172506 0.7186974 0.21912399 prediction 0.618524744287338 Functional Loss - ADGRA1 ENSG00000197177 CDS Human protein_coding chr10:134941909 chr10:134941910 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_6657 0 0 0 0 1 Nucleus 0.438718598599238 0.438718592994914 0.4373948 0 hPsi_site_12074 iPseU_CNN:0.4373948;iRNA_PseU:0 12075 chr8 42227422 42227422 1 + A G UCEC 42227421 + 42227401 42227441 41 CTCTATTTCACTGGGAGTGATATTTTCAATAAGAATATGAG CTCTATTTCACTGGGAGTGATGTTTTCAATAAGAATATGAG < 41bp 0.809253297227058 0.40441572976046 0.28253645 0.2267837 prediction 0.618506594454115 Functional Loss - POLB ENSG00000070501 CDS Human protein_coding chr8:42227421 chr8:42227422 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6658 0 0 0 0 2 Cytosol 0.438726784453931 0.438728931607464 0 0 hPsi_site_12075 iPseU_CNN:0;iRNA_PseU:0 12076 chr16 3340059 3340059 1 + A G LAML 3340058 + 3340038 3340078 41 TTCACACTGGAGAGCGACCTTATAAGTGTCCCGAGTGTGGG TTCACACTGGAGAGCGACCTTGTAAGTGTCCCGAGTGTGGG < 41bp 0.909563256221003 0.600317809615577 0.26644114 0.26341534 prediction 0.618490893210853 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3340058 chr16:3340059 nonsynonymous SNV 0.562 4 22 hPsi_associated_SNPs_6659 0 0 1 0 0 Cytosol 0.4387049579553 0.438833309372519 0 0 hPsi_site_12076 iPseU_CNN:0;iRNA_PseU:0 12077 chr1 90400944 90400944 1 + A C rs146627333 90400943 + 90400923 90400963 41 ATTCTGCCAAAACAATTGTTTAAATGCATAAAGTTGAGGAC ATTCTGCCAAAACAATTGTTTCAATGCATAAAGTTGAGGAC < 41bp 0.842660143753833 0.533424338572423 0.40247583 0.33737147 prediction 0.618471610362819 Functional Loss - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90400943 chr1:90400944 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_6660 0 0 1 0 0 Nucleus 0.438718570914341 0.438717100702657 0 0 hPsi_site_12077 iPseU_CNN:0;iRNA_PseU:0 12078 chr16 437193 437193 1 + A G GBM 437192 + 437172 437212 41 GTGTTCGACTGGCTCCTGATTACGATGCGTTGGATGTTGCC GTGTTCGACTGGCTCCTGATTGCGATGCGTTGGATGTTGCC < 41bp 0.886859107283565 0.577631603085616 0.8792883 0.6474975 prediction 0.618455008395897 Functional Loss - LOC100134368 ENSG00000236829 ncRNA_exonic Human transcribed_processed_pseudogene chr16:437192 chr16:437193 . . 0 22 hPsi_associated_SNPs_6661 0 0 0 0 0 unknown 0.438702482015176 0.438669565305767 0.4635816 0 hPsi_site_12078 iPseU_CNN:0.4635816;iRNA_PseU:0 12079 chr14 101540451 101540451 1 + A G rs76162429 101540450 + 101540430 101540470 41 CTGGTACTGTGGTTTTCTTGTATCTGGCCTCCACCTCCTAG CTGGTACTGTGGTTTTCTTGTGTCTGGCCTCCACCTCCTAG < 41bp 0.809223863961223 0.424952472753198 0.64534175 0.22182202 prediction 0.618447727922446 Functional Loss - MEG9;LINC02285 ENSG00000230805 ncRNA_exonic Human lincRNA chr14:101540450 chr14:101540451 . . 0 22 hPsi_associated_SNPs_6662 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.2906835 0 hPsi_site_12079 iPseU_CNN:0.2906835;iRNA_PseU:0 12080 chr4 69973842 69973842 1 + T G UCEC 69973841 + 69973821 69973861 41 GTCATCCAAAGACCAGAGCTTTTATAACTCATGGTGGAGCC GTCATCCAAAGACCAGAGCTTGTATAACTCATGGTGGAGCC < 41bp 0.82958248567882 0.520362786224011 0.5344488 0.2460764 prediction 0.618439398909617 Functional Loss - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69973841 chr4:69973842 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_6663 0 0 0 0 1 Endoplasmic reticulum 0.43871859338699 0.438650359114859 0.0688975999999999 0 hPsi_site_12080 iPseU_CNN:0.0688975999999999;iRNA_PseU:0 12081 chr10 75676383 75676383 1 + A C rs142117323 75676382 + 75676362 75676402 41 GCTGGTTGTCATTTTTGCAGTAGAGTCATCTCCATCAGCTG GCTGGTTGTCATTTTTGCAGTCGAGTCATCTCCATCAGCTG < 41bp 0.819326925363675 0.510126936182831 0.33239368 0.2859754 prediction 0.618399978361687 Functional Loss - C10orf55;PLAU ENSG00000222047;ENSG00000122861 UTR5;UTR3 Human other chr10:75676382 chr10:75676383 . . 0 22 hPsi_associated_SNPs_6664 1 0 0 3 0 unknown 0.437593011869457 0.438499777520107 0 0 hPsi_site_12081 iPseU_CNN:0;iRNA_PseU:0 12082 chr12 13155146 13155146 1 + A G rs535827640 13155145 + 13155125 13155165 41 TGGTCAGTCAAGACTTTGGCTACACGATTTACTCCACCGCA TGGTCAGTCAAGACTTTGGCTGCACGATTTACTCCACCGCA < 41bp 0.889496084345491 0.580313869288952 0.5294712 0.48764253 prediction 0.618364430113079 Functional Loss - HTR7P1 ENSG00000183935 ncRNA_exonic Human transcribed_processed_pseudogene chr12:13155145 chr12:13155146 . . 0 22 hPsi_associated_SNPs_6665 0 0 0 0 0 unknown 0.437518858760327 0.43790611479098 0.0589424000000001 0 hPsi_site_12082 iPseU_CNN:0.0589424000000001;iRNA_PseU:0 12083 chr11 72553807 72553807 1 + A G COAD 72553806 + 72553786 72553826 41 TTGGTTTTCTTTGTTCAAGATACGGATTATTGCTCCCTCAG TTGGTTTTCTTTGTTCAAGATGCGGATTATTGCTCCCTCAG < 41bp 0.809133231534183 0.414925911374322 0.35153484 0.3032338 prediction 0.618266463068366 Functional Loss - FCHSD2 ENSG00000137478 CDS Human protein_coding chr11:72553806 chr11:72553807 synonymous SNV . 0 22 hPsi_associated_SNPs_6666 0 0 0 2 0 Cytosol 0.43871859298835 0.438718592996353 0 0 hPsi_site_12083 iPseU_CNN:0;iRNA_PseU:0 12084 chr16 24580545 24580545 1 + A G UCEC 24580544 + 24580524 24580564 41 ATGAAAAATATTATAAAGGTTATGCTGCTGGAGCACAGCCT ATGAAAAATATTATAAAGGTTGTGCTGCTGGAGCACAGCCT < 41bp 0.809095151404071 0.405492691248538 0.36193144 0.29606545 prediction 0.618190302808142 Functional Loss - RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580544 chr16:24580545 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_6667 0 0 1 0 0 Cytosol 0.438722505721876 0.438721320187681 0 0 hPsi_site_12084 iPseU_CNN:0;iRNA_PseU:0 12085 chr15 45448048 45448048 1 + T G STAD 45448047 + 45448027 45448067 41 TCCTGGCCATCATGTATGTCTTTGCCTCCCACCACTTCCGC TCCTGGCCATCATGTATGTCTGTGCCTCCCACCACTTCCGC < 41bp 0.853678560785665 0.544585260660171 0.38264668 0.31121963 prediction 0.618186600250988 Functional Loss - DUOX1 ENSG00000137857 CDS Human protein_coding chr15:45448047 chr15:45448048 nonsynonymous SNV 0.970 4 22 hPsi_associated_SNPs_6668 0 0 0 0 2 chromatin 0.438718592989456 0.438708316339446 0 0 hPsi_site_12085 iPseU_CNN:0;iRNA_PseU:0 12086 chr14 39815204 39815204 1 + T G SKCM 39815203 + 39815183 39815223 41 GACCAGCAGAACTCAGAAGTTTTAATATGCCTTCTTTGGAT GACCAGCAGAACTCAGAAGTTGTAATATGCCTTCTTTGGAT < 41bp 0.816254003963812 0.507166078128254 0.5234734 0.38373488 prediction 0.618175851671118 Functional Loss - MIA2 ENSG00000150527;ENSG00000258941 CDS Human other chr14:39815203 chr14:39815204 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6669 0 0 0 0 1 cytosol 0.438718592235446 0.438718592995145 0.0469468 0 hPsi_site_12086 iPseU_CNN:0.0469468;iRNA_PseU:0 12087 chr11 62546386 62546386 1 + A G UCEC 62546385 + 62546365 62546405 41 CAGATGACCTTCTCAAGTACTATCACCAGGTGACTCGTGCT CAGATGACCTTCTCAAGTACTGTCACCAGGTGACTCGTGCT < 41bp 0.809084466657641 0.377859269636273 0.69245756 0.28288552 prediction 0.618168933315282 Functional Loss - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62546385 chr11:62546386 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6670 0 0 1 0 2 Ribosome 0.438847052055143 0.435387394205983 0.38491512 0 hPsi_site_12087 iPseU_CNN:0.38491512;iRNA_PseU:0 12088 chr1 113241090 113241090 1 + A G COAD 113241089 + 113241069 113241109 41 GTGTGGGCGTCATCTCCCCGTACCGGAAACAGGTCAGGTCC GTGTGGGCGTCATCTCCCCGTGCCGGAAACAGGTCAGGTCC < 41bp 0.809081451435427 0.383451243713934 0.6659444 0.18017817 prediction 0.618162902870854 Functional Loss - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113241089 chr1:113241090 nonsynonymous SNV 0.955 5 22 hPsi_associated_SNPs_6671 0 0 1 0 1 Cytosol 0.438880989569305 0.438744959222955 0.3318888 0 hPsi_site_12088 iPseU_CNN:0.3318888;iRNA_PseU:0 12089 chr1 249141682 249141682 1 + A G STAD 249141681 + 249141661 249141701 41 CGCATGCTGGCCAGACCCTCTACATCTGCAGTGAGTGCGGA CGCATGCTGGCCAGACCCTCTGCATCTGCAGTGAGTGCGGA < 41bp 0.903612486402462 0.594549455104702 0.4134511 0.33320904 prediction 0.618126062595519 Functional Loss - ZNF672 ENSG00000171161 CDS Human protein_coding chr1:249141681 chr1:249141682 nonsynonymous SNV 0.097 3 22 hPsi_associated_SNPs_6672 0 0 1 0 0 Ribosome 0.438796711761854 0.439866566262421 0 0 hPsi_site_12089 iPseU_CNN:0;iRNA_PseU:0 12090 chr13 115070354 115070354 1 + T G STAD 115070353 + 115070333 115070373 41 AGGATCTGCAAGGCAGAAGGTTCGGGGACTGGTCCTGAGAA AGGATCTGCAAGGCAGAAGGTGCGGGGACTGGTCCTGAGAA < 41bp 0.809062852386008 0.480979551221319 0.666794 0.30764145 prediction 0.618125704772015 Functional Loss - UPF3A ENSG00000169062 CDS Human protein_coding chr13:115070353 chr13:115070354 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_6673 0 0 1 0 1 chromatin 0.438718544320867 0.438718807414175 0.333588 0 hPsi_site_12090 iPseU_CNN:0.333588;iRNA_PseU:0 12091 chr3 28562503 28562503 1 + T G SKCM 28562502 + 28562482 28562522 41 GTTGTCTGTGAGACGGAAGTTTTACTAAAAGAGCTGGAGCA GTTGTCTGTGAGACGGAAGTTGTACTAAAAGAGCTGGAGCA < 41bp 0.81941553205637 0.510360523284427 0.5938096 0.36264372 prediction 0.618110017543885 Functional Loss - ZCWPW2 ENSG00000206559 CDS Human protein_coding chr3:28562502 chr3:28562503 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_6674 0 0 0 0 1 nucleus 0.438901126627499 0.439458509201243 0.1876192 0 hPsi_site_12091 iPseU_CNN:0.1876192;iRNA_PseU:0 12092 chr6 72011258 72011258 1 + A G HNSC 72011257 + 72011237 72011277 41 GAGTATTTTGTTTATACAATTAGAGACAGAAGAGAAAGGAG GAGTATTTTGTTTATACAATTGGAGACAGAAGAGAAAGGAG < 41bp 0.809050848125172 0.40262703375274 0.29197264 0.2669182 prediction 0.618101696250343 Functional Loss - OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72011257 chr6:72011258 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_6675 0 0 1 0 0 exosome 0.438721067543926 0.438718592889579 0 0 hPsi_site_12092 iPseU_CNN:0;iRNA_PseU:0 12093 chr7 819716 819716 1 + A G COAD 819715 + 819695 819735 41 ACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTTGCTG ACTATCAGAGCAGTGTCCAGTGCCTGTACCGAGAGTTGCTG < 41bp 0.809049564167869 0.38591990608854 0.6816058 0.21280447 prediction 0.618099128335739 Functional Loss - DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819715 chr7:819716 nonsynonymous SNV 0.359 1 22 hPsi_associated_SNPs_6676 0 0 1 0 1 Ribosome 0.438578691065356 0.438469718310086 0.3632116 0 hPsi_site_12093 iPseU_CNN:0.3632116;iRNA_PseU:0 12094 chr10 101287944 101287944 1 + A C rs11190137 101287943 + 101287923 101287963 41 AACCACATTTCTTTCTCTGTTACCCCACTACTAAAAATCAG AACCACATTTCTTTCTCTGTTCCCCCACTACTAAAAATCAG < 41bp 0.837887053538593 0.528838905024793 0.33110434 0.2531538 prediction 0.6180962970276 Functional Loss - LINC01475 ENSG00000228778 ncRNA_exonic Human lincRNA chr10:101287943 chr10:101287944 . . 0 22 hPsi_associated_SNPs_6677 0 1 0 0 0 unknown 0.438718595765104 0.438718592981142 0 0 hPsi_site_12094 iPseU_CNN:0;iRNA_PseU:0 12095 chrX 49029570 49029570 1 + T G GBM 49029569 + 49029549 49029589 41 TGATCCTTGCTGCTATTTTCTTTGTTGTCTACATGTGTGAC TGATCCTTGCTGCTATTTTCTGTGTTGTCTACATGTGTGAC < 41bp 0.809020252110882 0.475269574235537 0.22823009 0.24571761 prediction 0.618040504221764 Functional Loss - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49029569 chrX:49029570 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6678 0 0 1 0 1 Ribosome 0.436161655012315 0.434596424045437 0 0 hPsi_site_12095 iPseU_CNN:0;iRNA_PseU:0 12096 chr9 128070036 128070036 1 + T G GBM 128070035 + 128070015 128070055 41 GATAGAATGGCTCTTGACAATTTATTGGCAAACCTACCCCC GATAGAATGGCTCTTGACAATGTATTGGCAAACCTACCCCC < 41bp 0.809006673429389 0.473024515275557 0.48471877 0.2764113 prediction 0.618013346858777 Functional Loss - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128070035 chr9:128070036 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6679 0 0 1 0 1 Nucleus 0.438718603843308 0.438719860660916 0 0 hPsi_site_12096 iPseU_CNN:0;iRNA_PseU:0 12097 chr1 207016225 207016225 1 + A G rs2243193 207016224 + 207016204 207016244 41 CCTTCCCATCTAATTTATTGTAAAGTCATATAGTCCATGTC CCTTCCCATCTAATTTATTGTGAAGTCATATAGTCCATGTC < 41bp 0.808989649399597 0.462329436848245 0.66624993 0.40655354 prediction 0.617979298799194 Functional Loss - IL19 ENSG00000142224 UTR3 Human protein_coding chr1:207016224 chr1:207016225 . . 0 22 hPsi_associated_SNPs_6680 0 0 0 0 0 exosome 0.438734734781668 0.438718574019855 0.33249986 0 hPsi_site_12097 iPseU_CNN:0.33249986;iRNA_PseU:0 12098 chr8 110563085 110563085 1 + T G UCEC 110563084 + 110563064 110563104 41 CCCAGTTTCGGTTATTTAAATTTTGTACCTGCCTAGCAACA CCCAGTTTCGGTTATTTAAATGTTGTACCTGCCTAGCAACA < 41bp 0.808986803320702 0.472155212039966 0.328049 0.23914549 prediction 0.617973606641404 Functional Loss - EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110563084 chr8:110563085 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6681 0 0 1 1 2 Ribosome 0.438718602887891 0.438718584016298 0 0 hPsi_site_12098 iPseU_CNN:0;iRNA_PseU:0 12099 chr4 944226 944226 1 + A G SKCM 944225 + 944205 944245 41 CCAGCAGTTCGACAGAAGTGTACAGAGGCTTCTGGCAACAC CCAGCAGTTCGACAGAAGTGTGCAGAGGCTTCTGGCAACAC < 41bp 0.808958293941613 0.495867408133194 0.76816595 0.39960733 prediction 0.617916587883227 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:944225 chr4:944226 synonymous SNV . 0 22 hPsi_associated_SNPs_6682 0 0 1 0 2 chromatin 0.437646895761907 0.438812293730007 0.5363319 0 hPsi_site_12099 iPseU_CNN:0.5363319;iRNA_PseU:0 12100 chr12 21679866 21679866 1 + T G UCEC 21679865 + 21679845 21679885 41 CCTTGGCTCTTTTCCTGGTGTTTGTTTTCCTGGGAAACTCC CCTTGGCTCTTTTCCTGGTGTGTGTTTTCCTGGGAAACTCC < 41bp 0.808945617552878 0.497817394686575 0.58147985 0.4234896 prediction 0.617891235105755 Functional Loss - SPX ENSG00000134548 CDS Human protein_coding chr12:21679865 chr12:21679866 nonsynonymous SNV 0.070 0 22 hPsi_associated_SNPs_6683 0 0 0 0 2 exosome 0.438718592995099 0.438718592995115 0.1629597 0 hPsi_site_12100 iPseU_CNN:0.1629597;iRNA_PseU:0 12101 chr3 49548223 49548223 1 + T G STAD 49548222 + 49548202 49548242 41 CGAGTGACCATTCCAACAGATTTGATTGCCTCCAGTGGAGA CGAGTGACCATTCCAACAGATGTGATTGCCTCCAGTGGAGA < 41bp 0.8166750211064 0.507752024197259 0.33618194 0.2755795 prediction 0.617845993818283 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49548222 chr3:49548223 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_6684 0 0 0 0 1 Nucleus 0.438720382440166 0.438671090319851 0 0 hPsi_site_12101 iPseU_CNN:0;iRNA_PseU:0 12102 chr7 129946724 129946724 1 + A G STAD 129946723 + 129946703 129946743 41 CCAATCCTGATGGATATGTGTATACTCAAACTCAAGTGAGT CCAATCCTGATGGATATGTGTGTACTCAAACTCAAGTGAGT < 41bp 0.808922990200233 0.385201979326424 0.4884817 0.28911594 prediction 0.617845980400466 Functional Loss - CPA4 ENSG00000128510 CDS Human protein_coding chr7:129946723 chr7:129946724 nonsynonymous SNV 0.962 4 22 hPsi_associated_SNPs_6685 0 0 0 0 2 Endoplasmic reticulum 0.438734592544145 0.438725184999134 0 0 hPsi_site_12102 iPseU_CNN:0;iRNA_PseU:0 12103 chr17 48633014 48633014 1 + A G UCEC 48633013 + 48632993 48633033 41 CTGCGAATTACGAAAACTACTACATCCATGACTGCCCCAAC CTGCGAATTACGAAAACTACTGCATCCATGACTGCCCCAAC < 41bp 0.808871243142892 0.396130567445482 0.44794995 0.28197563 prediction 0.617742486285785 Functional Loss - SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48633013 chr17:48633014 synonymous SNV . 0 22 hPsi_associated_SNPs_6686 0 0 0 1 0 nucleus 0.439116400424427 0.439447838092464 0 0 hPsi_site_12103 iPseU_CNN:0;iRNA_PseU:0 12104 chr11 18497990 18497990 1 + A C COAD 18497989 + 18497969 18498009 41 CTGAAGGATCTGAACCCAGATATAGGAACTGATAAAGATCC CTGAAGGATCTGAACCCAGATCTAGGAACTGATAAAGATCC < 41bp 0.808860810947672 0.433042507105616 0.24786547 0.24890915 prediction 0.617721621895345 Functional Loss - LDHAL6A ENSG00000166800 CDS Human protein_coding chr11:18497989 chr11:18497990 nonsynonymous SNV 0.436 0 22 hPsi_associated_SNPs_6687 0 0 0 0 2 Nucleus 0.438705132435273 0.438718135710606 0 0 hPsi_site_12104 iPseU_CNN:0;iRNA_PseU:0 12105 chr10 70097032 70097032 1 + A G COAD 70097031 + 70097011 70097051 41 TGACGCTAGTGATGGGACAGTACGACTTCGTGGACTACCAT TGACGCTAGTGATGGGACAGTGCGACTTCGTGGACTACCAT < 41bp 0.808860218702389 0.405023675495517 0.53281236 0.20821708 prediction 0.617720437404777 Functional Loss - HNRNPH3 ENSG00000096746 CDS Human protein_coding chr10:70097031 chr10:70097032 synonymous SNV . 0 22 hPsi_associated_SNPs_6688 0 0 1 0 2 Cytosol 0.446587208046478 0.438386996412999 0.06562472 0 hPsi_site_12105 iPseU_CNN:0.06562472;iRNA_PseU:0 12106 chr17 33935332 33935332 1 + A G LIHC 33935331 + 33935311 33935351 41 TGCGTGGCAAAACTCCATGATATCAATGCCCAAATGGTGGA TGCGTGGCAAAACTCCATGATGTCAATGCCCAAATGGTGGA < 41bp 0.808860218050976 0.379613936310143 0.4702812 0.23171946 prediction 0.617720436101952 Functional Loss - AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33935331 chr17:33935332 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6689 0 0 1 0 2 Cytosol 0.437861700876869 0.43757105841502 0 0 hPsi_site_12106 iPseU_CNN:0;iRNA_PseU:0 12107 chr16 55719159 55719159 1 + T G STAD 55719158 + 55719138 55719178 41 TCGTCGTCATCGTCTTGTATTTTAGCCTCTGGAAAGGGGTG TCGTCGTCATCGTCTTGTATTGTAGCCTCTGGAAAGGGGTG < 41bp 0.844462826099978 0.535609237521564 0.5233773 0.368681 prediction 0.617707177156828 Functional Loss - SLC6A2 ENSG00000103546 CDS Human protein_coding chr16:55719158 chr16:55719159 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6690 0 0 0 0 1 exosome 0.438718616395526 0.438712028063945 0.0467546000000001 0 hPsi_site_12107 iPseU_CNN:0.0467546000000001;iRNA_PseU:0 12108 chr18 10488562 10488562 1 + A G rs547931549 10488561 + 10488541 10488581 41 GAGACACAGGTGTAGATATGTATATACAAAAAGATGTACGG GAGACACAGGTGTAGATATGTGTATACAAAAAGATGTACGG < 41bp 0.808850790664818 0.467175390146096 0.32950345 0.26727265 prediction 0.617701581329635 Functional Loss - APCDD1 ENSG00000154856 UTR3 Human protein_coding chr18:10488561 chr18:10488562 . . 0 22 hPsi_associated_SNPs_6691 0 0 0 0 0 Cytosol 0.43869686655715 0.438693996745666 0 0 hPsi_site_12108 iPseU_CNN:0;iRNA_PseU:0 12109 chr4 186272725 186272725 1 + T G UCEC 186272724 + 186272704 186272744 41 TCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGA TCTTTTTCATTATCCTCATTTGTGGAAAGACTTCCTCGCGA < 41bp 0.808849597801309 0.474199578040645 0.31424248 0.24233761 prediction 0.617699195602618 Functional Loss - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186272724 chr4:186272725 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6692 0 0 1 0 1 Endoplasmic reticulum 0.438717750153103 0.438718594024047 0 0 hPsi_site_12109 iPseU_CNN:0;iRNA_PseU:0 12110 chr19 57868159 57868159 1 + A G UCEC 57868158 + 57868138 57868178 41 CACACTGGAAAAAGACACTATACATGCAGTGAATGTGGGAA CACACTGGAAAAAGACACTATGCATGCAGTGAATGTGGGAA < 41bp 0.808815345340775 0.39152133311823 0.3325407 0.14315858 prediction 0.617630690681551 Functional Loss - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57868158 chr19:57868159 nonsynonymous SNV 0.289 0 22 hPsi_associated_SNPs_6693 0 0 0 0 0 chromatin 0.438718159060319 0.438714017042651 0 0 hPsi_site_12110 iPseU_CNN:0;iRNA_PseU:0 12111 chr16 3350092 3350092 1 + A G UCEC 3350091 + 3350071 3350111 41 GGTCTGTTTCATCCCCACTGTATAGCTGAGCTAGACACAGT GGTCTGTTTCATCCCCACTGTGTAGCTGAGCTAGACACAGT < 41bp 0.808811547037812 0.409894291792502 0.34339583 0.21564716 prediction 0.617623094075623 Functional Loss - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3350091 chr16:3350092 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_6694 0 0 0 0 0 exosome 0.438751457929424 0.438722323137689 0 0 hPsi_site_12111 iPseU_CNN:0;iRNA_PseU:0 12112 chr17 19186656 19186656 1 + A G UCEC 19186655 + 19186635 19186675 41 GCAAGAACTGGCGGCATGTGTACAAGGCGCTGACCCTGCTG GCAAGAACTGGCGGCATGTGTGCAAGGCGCTGACCCTGCTG < 41bp 0.808794500290088 0.420660835690969 0.8232226 0.34628838 prediction 0.617589000580177 Functional Loss - EPN2 ENSG00000072134 CDS Human protein_coding chr17:19186655 chr17:19186656 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6695 0 0 1 0 0 Nucleus 0.438718596250897 0.438718599358996 0.6464452 0 hPsi_site_12112 iPseU_CNN:0.6464452;iRNA_PseU:0 12113 chr3 113342318 113342318 1 + A G CESC 113342317 + 113342297 113342337 41 GCCCCAGGGACTTTGCTTCCTACATGCTGGGCATCTTCATC GCCCCAGGGACTTTGCTTCCTGCATGCTGGGCATCTTCATC < 41bp 0.808787909476686 0.372388836063844 0.50288254 0.21476403 prediction 0.617575818953372 Functional Loss - SIDT1 ENSG00000072858 CDS Human protein_coding chr3:113342317 chr3:113342318 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6696 0 0 0 0 2 exosome 0.439053803015161 0.438719295576559 0.00576507999999998 0 hPsi_site_12113 iPseU_CNN:0.00576507999999998;iRNA_PseU:0 12114 chr8 24256455 24256455 1 + A G LIHC 24256454 + 24256434 24256474 41 CTGGTCTGATGGGGATAAGATAAAGGTGGTGCCCAGCGCAA CTGGTCTGATGGGGATAAGATGAAGGTGGTGCCCAGCGCAA < 41bp 0.808782832927024 0.381174374960706 0.63164824 0.28553328 prediction 0.617565665854048 Functional Loss - ADAMDEC1 ENSG00000134028 CDS Human protein_coding chr8:24256454 chr8:24256455 nonsynonymous SNV 0.631 4 22 hPsi_associated_SNPs_6697 0 0 0 0 2 exosome 0.438719048662999 0.438718587090258 0.26329648 0 hPsi_site_12114 iPseU_CNN:0.26329648;iRNA_PseU:0 12115 chr8 17063211 17063211 1 + T G COAD 17063210 + 17063190 17063230 41 ATTATAAGTTCTTTCTCCTTTTCTTGGCTTATTCTCTGCTC ATTATAAGTTCTTTCTCCTTTGCTTGGCTTATTCTCTGCTC < 41bp 0.808776146465301 0.477640408316559 0.34794527 0.34194443 prediction 0.617552292930603 Functional Loss - ZDHHC2 ENSG00000104219 CDS Human protein_coding chr8:17063210 chr8:17063211 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6698 0 0 1 0 1 Endoplasmic reticulum 0.438718593178406 0.438721360679592 0 0 hPsi_site_12115 iPseU_CNN:0;iRNA_PseU:0 12116 chr9 107550287 107550287 1 + T G LUAD 107550286 + 107550266 107550306 41 CACTATAGTTACCAGCATATTTTTCTCCATACTTCACGAGG CACTATAGTTACCAGCATATTGTTCTCCATACTTCACGAGG < 41bp 0.821538134273216 0.512785018401052 0.28315246 0.24264422 prediction 0.617506231744328 Functional Loss - ABCA1 ENSG00000165029 CDS Human protein_coding chr9:107550286 chr9:107550287 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6699 0 0 0 0 0 cytosol 0.437936472687632 0.438723418340549 0 0 hPsi_site_12116 iPseU_CNN:0;iRNA_PseU:0 12117 chr19 10745522 10745522 1 + T G MESO 10745521 + 10745501 10745541 41 ACCTCGGCTTTCAGACGGATTTCCGGGTGTACCTGCACTTA ACCTCGGCTTTCAGACGGATTGCCGGGTGTACCTGCACTTA < 41bp 0.808703554127084 0.454639056877427 0.22586095 0.14632806 prediction 0.617407108254168 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10745521 chr19:10745522 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_6700 0 0 0 0 1 Ribosome 0.438718592340794 0.438718590124053 0 0 hPsi_site_12117 iPseU_CNN:0;iRNA_PseU:0 12118 chr8 104442886 104442886 1 + A G BLCA 104442885 + 104442865 104442905 41 CTGACAGGAATATAGTACTGTACGATATGAGGCAAGCTACT CTGACAGGAATATAGTACTGTGCGATATGAGGCAAGCTACT < 41bp 0.808696667809821 0.387259731457628 0.6979798 0.33261675 prediction 0.617393335619642 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104442885 chr8:104442886 nonsynonymous SNV 0.843 4 22 hPsi_associated_SNPs_6701 0 0 1 0 2 Nucleus 0.438301054662596 0.438684848082216 0.3959596 0 hPsi_site_12118 iPseU_CNN:0.3959596;iRNA_PseU:0 12119 chr13 64312196 64312196 1 + A G rs56855597 64312195 + 64312175 64312215 41 CATGAAAGACTTGCTGTTGTTAGGATCCCCCTTCCAAAGGT CATGAAAGACTTGCTGTTGTTGGGATCCCCCTTCCAAAGGT < 41bp 0.808690105634155 0.444822119746637 0.56706774 0.3377543 prediction 0.61738021126831 Functional Loss - OR7E156P ENSG00000231061 upstream Human antisense chr13:64312195 chr13:64312196 . . 0 22 hPsi_associated_SNPs_6702 0 0 0 0 0 unknown 0.438718592264789 0.438719841739939 0.13413548 0 hPsi_site_12119 iPseU_CNN:0.13413548;iRNA_PseU:0 12120 chr1 156770248 156770248 1 + T G UCEC 156770247 + 156770227 156770267 41 AGACCCAAGCCAAATATGGATTCTAGGGCTCTGGAACTGAT AGACCCAAGCCAAATATGGATGCTAGGGCTCTGGAACTGAT < 41bp 0.840471411799761 0.531781587855102 0.3764571 0.24016356 prediction 0.617379647889318 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156770247 chr1:156770248 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6703 0 0 1 0 1 Ribosome 0.438603307113735 0.438717189954745 0 0 hPsi_site_12120 iPseU_CNN:0;iRNA_PseU:0 12121 chr4 2069560 2069560 1 + A G rs116317407 2069559 + 2069539 2069579 41 GTGTTGCCTGCTGACTTGCTTATGTCTGTTTGGAAGCTGCT GTGTTGCCTGCTGACTTGCTTGTGTCTGTTTGGAAGCTGCT < 41bp 0.808682664844201 0.467394445156717 0.4009026 0.28043005 prediction 0.617365329688402 Functional Loss - NAT8L ENSG00000185818 UTR3 Human protein_coding chr4:2069559 chr4:2069560 . . 0 22 hPsi_associated_SNPs_6704 0 0 1 0 0 Ribosome 0.436798082636097 0.437286791395964 0 0 hPsi_site_12121 iPseU_CNN:0;iRNA_PseU:0 12122 chrX 122598753 122598753 1 + A G UCEC 122598752 + 122598732 122598772 41 TGTACGAGAAAATGTGGTCTTACATGAAATCAGCGGAGCCA TGTACGAGAAAATGTGGTCTTGCATGAAATCAGCGGAGCCA < 41bp 0.808658669094899 0.402195898665031 0.76953566 0.36645383 prediction 0.617317338189798 Functional Loss - GRIA3 ENSG00000125675 CDS Human protein_coding chrX:122598752 chrX:122598753 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6705 0 0 0 0 1 Nucleus 0.438711486167627 0.438714824362044 0.53907132 0 hPsi_site_12122 iPseU_CNN:0.53907132;iRNA_PseU:0 12123 chr16 81390408 81390408 1 + A G COAD 81390407 + 81390387 81390427 41 CAGGTCCACATGAAGGATGTTATGTCAGCTCTGTGGGTTTC CAGGTCCACATGAAGGATGTTGTGTCAGCTCTGTGGGTTTC < 41bp 0.808621471517515 0.383382926076133 0.75455785 0.48099893 prediction 0.61724294303503 Functional Loss - GAN ENSG00000261609 CDS Human protein_coding chr16:81390407 chr16:81390408 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6706 0 0 1 0 1 Ribosome 0.438715691540355 0.438716683288543 0.5091157 0 hPsi_site_12123 iPseU_CNN:0.5091157;iRNA_PseU:0 12124 chr3 183883991 183883991 1 + A G STAD 183883990 + 183883970 183884010 41 GGCGGCATCTACATTGGCTCTATCATGAAGGGTGGGGCCGT GGCGGCATCTACATTGGCTCTGTCATGAAGGGTGGGGCCGT < 41bp 0.808605467392931 0.378760942721561 0.4241469 0.28689873 prediction 0.617210934785862 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183883990 chr3:183883991 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6707 0 0 1 0 2 Cytosol 0.438608757626466 0.438575396137611 0 0 hPsi_site_12124 iPseU_CNN:0;iRNA_PseU:0 12125 chr1 23382500 23382500 1 + T G LUAD 23382499 + 23382479 23382519 41 CAGCTCGACAGTTACAAAGTTTTGGAATGGATGTCACACTT CAGCTCGACAGTTACAAAGTTGTGGAATGGATGTCACACTT < 41bp 0.808580371203271 0.466307656537256 0.5666802 0.51419085 prediction 0.617160742406542 Functional Loss - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23382499 chr1:23382500 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6708 0 0 1 0 1 Cytosol 0.438938225433513 0.438735872819606 0.1049787 0 hPsi_site_12125 iPseU_CNN:0.1049787;iRNA_PseU:0 12126 chr2 62449623 62449623 1 + A G ESCA 62449622 + 62449602 62449642 41 GAGGCGGGCAGGCTCTCCAATATAAGCCATCTGAACTACTG GAGGCGGGCAGGCTCTCCAATGTAAGCCATCTGAACTACTG < 41bp 0.894442091293632 0.585872857191126 0.5793643 0.41439575 prediction 0.617138468205012 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449622 chr2:62449623 nonsynonymous SNV 0.885 0 22 hPsi_associated_SNPs_6709 0 0 1 0 0 Ribosome 0.438718478804395 0.438716129339158 0.1587286 0 hPsi_site_12126 iPseU_CNN:0.1587286;iRNA_PseU:0 12127 chr19 54242630 54242630 1 + A G STAD 54242629 + 54242609 54242649 41 GGGAAGCCCTTTCTGTTGTCTAAAAGAAGAGAAAGCGCTTC GGGAAGCCCTTTCTGTTGTCTGAAAGAAGAGAAAGCGCTTC < 41bp 0.84342884265363 0.534877567069658 0.26513195 0.21056437 prediction 0.617102551167945 Functional Loss - MIR518A2 ENSG00000207699 ncRNA_exonic Human miRNA chr19:54242629 chr19:54242630 . . 0 22 hPsi_associated_SNPs_6710 0 0 0 0 0 unknown 0.438714577791064 0.438718743819868 0 0 hPsi_site_12127 iPseU_CNN:0;iRNA_PseU:0 12128 chr1 34663085 34663085 1 + A G STAD 34663084 + 34663064 34663104 41 CAGAAGGTGGCCATGCCCGTTATCAGCAGCAGGCAGGACTG CAGAAGGTGGCCATGCCCGTTGTCAGCAGCAGGCAGGACTG < 41bp 0.913368040317509 0.604823440348699 0.5905506 0.32248992 prediction 0.617089199937621 Functional Loss - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34663084 chr1:34663085 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6711 0 0 0 0 0 unknown 0.438718487544438 0.438725391508985 0.1811012 0 hPsi_site_12128 iPseU_CNN:0.1811012;iRNA_PseU:0 12129 chrX 153046993 153046993 1 + T G LUAD 153046992 + 153046972 153047012 41 CTGTGAAGATCGGCGACGTGTTCAATGGGCGGTACCACGTG CTGTGAAGATCGGCGACGTGTGCAATGGGCGGTACCACGTG < 41bp 0.847924202962655 0.539379722820977 0.9441304 0.8259052 prediction 0.617088960283356 Functional Loss - SRPK3 ENSG00000184343 CDS Human protein_coding chrX:153046992 chrX:153046993 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_6712 0 0 0 0 2 chromatin 0.436479845067944 0.438402734121447 0.2364504 0 hPsi_site_12129 iPseU_CNN:0.2364504;iRNA_PseU:0 12130 chr19 57955220 57955220 1 + A G HNSC 57955219 + 57955199 57955239 41 AATGTGGGGAATTGTTTAGGTACAACTCCAACCTTATTAAA AATGTGGGGAATTGTTTAGGTGCAACTCCAACCTTATTAAA < 41bp 0.904751155548877 0.596206704498289 0.72466874 0.22618532 prediction 0.617088902101177 Functional Loss - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57955219 chr19:57955220 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_6713 0 0 1 0 0 exosome 0.4387185887586 0.438718590231314 0.44933748 0 hPsi_site_12130 iPseU_CNN:0.44933748;iRNA_PseU:0 12131 chr12 112194806 112194806 1 + A G rs149114814 112194805 + 112194785 112194825 41 TAAAGCCACTGGCATCTGATTATCTCCATTTGAACACACAG TAAAGCCACTGGCATCTGATTGTCTCCATTTGAACACACAG < 41bp 0.848650374135762 0.540110912176237 0.74846673 0.40680847 prediction 0.61707892391905 Functional Loss - ACAD10 ENSG00000111271 UTR3 Human protein_coding chr12:112194805 chr12:112194806 . . 0 22 hPsi_associated_SNPs_6714 0 0 1 1 0 Endoplasmic reticulum 0.438718702833832 0.438723754290083 0.49693346 0 hPsi_site_12131 iPseU_CNN:0.49693346;iRNA_PseU:0 12132 chr7 92085754 92085754 1 + T G UCEC 92085753 + 92085733 92085773 41 TGTCATGCACCTTCTGAGTATTTCAAGTCACGGTCATCACC TGTCATGCACCTTCTGAGTATGTCAAGTCACGGTCATCACC < 41bp 0.8085335502314 0.471765631361284 0.6586704 0.5652068 prediction 0.617067100462801 Functional Loss - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92085753 chr7:92085754 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6715 0 0 1 0 1 Ribosome 0.438740302208389 0.43871807290423 0.1869272 0 hPsi_site_12132 iPseU_CNN:0.1869272;iRNA_PseU:0 12133 chr10 81839145 81839145 1 + A C rs79749292 81839144 + 81839124 81839164 41 GGTCCTCACCTCTGCATGGTTACTAACGGGTTATCCGAGCC GGTCCTCACCTCTGCATGGTTCCTAACGGGTTATCCGAGCC < 41bp 0.828298824521547 0.519776611791459 0.73583704 0.36779428 prediction 0.617044425460175 Functional Loss - TMEM254 ENSG00000133678 intronic Human protein_coding chr10:81839144 chr10:81839145 . . 0 22 hPsi_associated_SNPs_6716 0 0 0 0 0 Endoplasmic reticulum 0.438718233319077 0.438718594360719 0.47167408 0 hPsi_site_12133 iPseU_CNN:0.47167408;iRNA_PseU:0 12134 chr10 124914591 124914591 1 + A G UCEC 124914590 + 124914570 124914610 41 CCAACTCCATGCGGCTCAAGTACCAGCACACCGGCGCCGTC CCAACTCCATGCGGCTCAAGTGCCAGCACACCGGCGCCGTC < 41bp 0.808512345075554 0.390597288044257 0.62318254 0.26618618 prediction 0.617024690151108 Functional Loss - BUB3 ENSG00000154473 CDS Human protein_coding chr10:124914590 chr10:124914591 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6717 0 0 1 0 1 Ribosome 0.438704840866808 0.438704068116357 0.24636508 0 hPsi_site_12134 iPseU_CNN:0.24636508;iRNA_PseU:0 12135 chr12 72167762 72167762 1 + A G UCEC 72167761 + 72167741 72167781 41 AAAAAACTGGGTCAAAGAATTACGGAAAATGTTGGGAAATG AAAAAACTGGGTCAAAGAATTGCGGAAAATGTTGGGAAATG < 41bp 0.808506646078536 0.405617940374796 0.6369478 0.34895635 prediction 0.617013292157073 Functional Loss - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72167761 chr12:72167762 synonymous SNV . 0 22 hPsi_associated_SNPs_6718 0 0 1 0 2 Ribosome 0.438718758978134 0.438718696269201 0.2738956 0 hPsi_site_12135 iPseU_CNN:0.2738956;iRNA_PseU:0 12136 chr19 58187763 58187763 1 + A G COAD 58187762 + 58187742 58187782 41 AAGCACAGCAAGGATGAAATTATTTCTCTATTAGTCCTGGA AAGCACAGCAAGGATGAAATTGTTTCTCTATTAGTCCTGGA < 41bp 0.808499441867159 0.384476473608916 0.32681447 0.33845407 prediction 0.616998883734318 Functional Loss - ZSCAN4 ENSG00000180532 CDS Human protein_coding chr19:58187762 chr19:58187763 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_6719 0 0 0 0 0 exosome 0.438718476329351 0.438718275663336 0 0 hPsi_site_12136 iPseU_CNN:0;iRNA_PseU:0 12137 chr1 110171959 110171959 1 + T G BLCA 110171958 + 110171938 110171978 41 TTCTGTATTAGGTGGATGGTTTTGACAGCGTGGATGATGAG TTCTGTATTAGGTGGATGGTTGTGACAGCGTGGATGATGAG < 41bp 0.840471144815939 0.531989932660635 0.3014287 0.24446219 prediction 0.616962424310607 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110171958 chr1:110171959 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6720 0 0 1 0 0 Cytosol 0.438718634455454 0.443385246701433 0 0 hPsi_site_12137 iPseU_CNN:0;iRNA_PseU:0 12138 chr12 56437178 56437178 1 + A G COAD 56437177 + 56437157 56437197 41 TCCCAAGCTGTATGTGAAGCTACATTACTGTGTGAGTTGTG TCCCAAGCTGTATGTGAAGCTGCATTACTGTGTGAGTTGTG < 41bp 0.808463255240557 0.382774192061475 0.26332045 0.18498063 prediction 0.616926510481113 Functional Loss - RPS26 ENSG00000197728 CDS Human protein_coding chr12:56437177 chr12:56437178 synonymous SNV . 0 22 hPsi_associated_SNPs_6721 0 0 1 0 2 Ribosome 0.43813571460506 0.437289127347437 0 0 hPsi_site_12138 iPseU_CNN:0;iRNA_PseU:0 12139 chr18 76753937 76753937 1 + T G UCEC 76753936 + 76753916 76753956 41 AGTTCAAGGCCCAGTTTCCGTTCGGGGGGCTGCTAGACTCG AGTTCAAGGCCCAGTTTCCGTGCGGGGGGCTGCTAGACTCG < 41bp 0.808456665762907 0.478633256451181 0.8628263 0.45749825 prediction 0.616913331525814 Functional Loss - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76753936 chr18:76753937 nonsynonymous SNV 0.467 4 22 hPsi_associated_SNPs_6722 0 0 0 0 0 exosome 0.438718502449833 0.438718592998844 0.7256526 0 hPsi_site_12139 iPseU_CNN:0.7256526;iRNA_PseU:0 12140 chr19 41765721 41765721 1 + A G BLCA 41765720 + 41765700 41765740 41 AGGTCCATCCTGCTGGACGCTATGTCCTCTGCCCTTCCACA AGGTCCATCCTGCTGGACGCTGTGTCCTCTGCCCTTCCACA < 41bp 0.909575725567853 0.601128292749867 0.68763983 0.4909289 prediction 0.616894865635971 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41765720 chr19:41765721 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6723 0 0 1 0 0 Nucleus 0.439764488988674 0.438809947912236 0.37527966 0 hPsi_site_12140 iPseU_CNN:0.37527966;iRNA_PseU:0 12141 chr2 182360543 182360543 1 + A G SKCM 182360542 + 182360522 182360562 41 AGTAATTGTTGACGCTTCTTTAAGCCACCCTGAGTCAGTAA AGTAATTGTTGACGCTTCTTTGAGCCACCCTGAGTCAGTAA < 41bp 0.808437004179273 0.39321857747449 0.46394396 0.2318927 prediction 0.616874008358545 Functional Loss - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182360542 chr2:182360543 synonymous SNV . 0 22 hPsi_associated_SNPs_6724 0 0 0 0 1 exosome 0.438685654716408 0.438718565523517 0 0 hPsi_site_12141 iPseU_CNN:0;iRNA_PseU:0 12142 chr1 154294515 154294515 1 + A G UCEC 154294514 + 154294494 154294534 41 TGGCCGTTACGATAGCCATCTACGTGGGTGGTAACGTCTCA TGGCCGTTACGATAGCCATCTGCGTGGGTGGTAACGTCTCA < 41bp 0.808390932523743 0.392765514110886 0.2498621 0.15046942 prediction 0.616781865047486 Functional Loss - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154294514 chr1:154294515 nonsynonymous SNV 0.681 4 22 hPsi_associated_SNPs_6725 0 0 0 0 1 Ribosome 0.43874463756129 0.438668267216492 0 0 hPsi_site_12142 iPseU_CNN:0;iRNA_PseU:0 12143 chr10 21805155 21805155 1 + A G COAD 21805154 + 21805134 21805174 41 TCCCCAGGCTGGCCGGGCAGTACACCGGAGATGCTTTGGGG TCCCCAGGCTGGCCGGGCAGTGCACCGGAGATGCTTTGGGG < 41bp 0.808375776142582 0.40407474075788 0.41257948 0.26563078 prediction 0.616751552285163 Functional Loss - SKIDA1 ENSG00000180592 CDS Human protein_coding chr10:21805154 chr10:21805155 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6726 0 0 0 1 1 Nucleus 0.438718568628266 0.438718592984964 0 0 hPsi_site_12143 iPseU_CNN:0;iRNA_PseU:0 12144 chr9 135558993 135558993 1 + T G UCEC 135558992 + 135558972 135559012 41 AGAAGATGAACAAACAGACTTTCCCTGAGCACTGTAGTTTG AGAAGATGAACAAACAGACTTGCCCTGAGCACTGTAGTTTG < 41bp 0.847284090917941 0.538928008731548 0.37733686 0.19448072 prediction 0.616712164372786 Functional Loss - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135558992 chr9:135558993 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_6727 0 0 1 1 2 Ribosome 0.438718563470234 0.438718062285198 0 0 hPsi_site_12144 iPseU_CNN:0;iRNA_PseU:0 12145 chr19 39127576 39127576 1 + A G BLCA 39127575 + 39127555 39127595 41 CAGTAACTTCAGGTGTTTAATAAAGATGTGTTGACTCAGCC CAGTAACTTCAGGTGTTTAATGAAGATGTGTTGACTCAGCC < 41bp 0.80834463964624 0.410076954009776 0.31785876 0.26230508 prediction 0.616689279292481 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39127575 chr19:39127576 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_6728 0 0 1 1 1 Cytosol 0.438684134749719 0.438678851560766 0 0 hPsi_site_12145 iPseU_CNN:0;iRNA_PseU:0 12146 chr11 60233518 60233518 1 + T G UCEC 60233517 + 60233497 60233537 41 TAAAAATGGAGAGTCTGAATTTTATTAGAGCTCACACACCA TAAAAATGGAGAGTCTGAATTGTATTAGAGCTCACACACCA < 41bp 0.823246307470326 0.514937539619062 0.63530123 0.3787951 prediction 0.616617535702528 Functional Loss - MS4A1 ENSG00000156738 CDS Human protein_coding chr11:60233517 chr11:60233518 nonsynonymous SNV 0.119 1 22 hPsi_associated_SNPs_6729 0 0 0 0 0 exosome 0.437970581921328 0.438278471059267 0.27060246 0 hPsi_site_12146 iPseU_CNN:0.27060246;iRNA_PseU:0 12147 chr1 109778615 109778615 1 + A G COAD 109778614 + 109778594 109778634 41 TGCAGATTGAACAGTTTGTGTACTCATCACCCCATGACAAC TGCAGATTGAACAGTTTGTGTGCTCATCACCCCATGACAAC < 41bp 0.897284319904152 0.588979119742045 0.88336253 0.26920795 prediction 0.616610400324214 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109778614 chr1:109778615 nonsynonymous SNV 0.865 4 22 hPsi_associated_SNPs_6730 0 0 1 0 1 Ribosome 0.438859738818757 0.441625814112223 0.76672506 0 hPsi_site_12147 iPseU_CNN:0.76672506;iRNA_PseU:0 12148 chr17 7646490 7646490 1 + A G BLCA 7646489 + 7646469 7646509 41 GCCACCTGGCCCCTTTTCCCTATACTCCCCTTCTGCAGCTC GCCACCTGGCCCCTTTTCCCTGTACTCCCCTTCTGCAGCTC < 41bp 0.808304742675742 0.403229605987068 0.56614786 0.530651 prediction 0.616609485351485 Functional Loss - DNAH2 ENSG00000183914 CDS Human protein_coding chr17:7646489 chr17:7646490 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6731 0 0 0 0 0 nucleus 0.438715856410055 0.438659860437315 0.0709937199999999 0 hPsi_site_12148 iPseU_CNN:0.0709937199999999;iRNA_PseU:0 12149 chr2 38917004 38917004 1 + A G rs141134809 38917003 + 38916983 38917023 41 TCACCATAGAAGCGGATACTTATTTGCCTGTGGATGAAACC TCACCATAGAAGCGGATACTTGTTTGCCTGTGGATGAAACC < 41bp 0.808280416412806 0.408240442564183 0.7596349 0.3812613 prediction 0.616560832825611 Functional Loss - GALM ENSG00000143891 CDS Human protein_coding chr2:38917003 chr2:38917004 nonsynonymous SNV 0.087 3 22 hPsi_associated_SNPs_6732 0 0 1 0 2 Ribosome 0.438717847384153 0.438710397219466 0.5192698 0 hPsi_site_12149 iPseU_CNN:0.5192698;iRNA_PseU:0 12150 chr6 138197194 138197194 1 + T G UCEC 138197193 + 138197173 138197213 41 CCCTTTGAAAGTGGGTGGAATTTACTTGCCTCTCCACTGGC CCCTTTGAAAGTGGGTGGAATGTACTTGCCTCTCCACTGGC < 41bp 0.853370315156727 0.545092758578682 0.37429297 0.34111643 prediction 0.616555113156092 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138197193 chr6:138197194 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6733 0 0 1 0 1 Cytosol 0.438718592995101 0.438718592994118 0 0 hPsi_site_12150 iPseU_CNN:0;iRNA_PseU:0 12151 chr1 153727192 153727192 1 + A G UCEC 153727191 + 153727171 153727211 41 CTAACCCCGGACATGGAGACTAAACTCCTCTTCATGACATC CTAACCCCGGACATGGAGACTGAACTCCTCTTCATGACATC < 41bp 0.808274374402073 0.392627142358023 0.49794248 0.29001808 prediction 0.616548748804145 Functional Loss - INTS3 ENSG00000143624 CDS Human protein_coding chr1:153727191 chr1:153727192 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6734 0 0 1 0 2 chromatin 0.438717685686219 0.438928839401931 0 0 hPsi_site_12151 iPseU_CNN:0;iRNA_PseU:0 12152 chr11 57429218 57429218 1 + A G rs559326595 57429217 + 57429197 57429237 41 TTTTTAAAAAATCAATGCTTTATATTCCATATGTGGTTCTT TTTTTAAAAAATCAATGCTTTGTATTCCATATGTGGTTCTT < 41bp 0.808270453867415 0.468496864191412 0.3003574 0.269025 prediction 0.616540907734831 Functional Loss - CLP1 ENSG00000172409 UTR3 Human protein_coding chr11:57429217 chr11:57429218 . . 0 22 hPsi_associated_SNPs_6735 0 0 1 1 0 Cytosol 0.438816930120242 0.43930556705834 0 0 hPsi_site_12152 iPseU_CNN:0;iRNA_PseU:0 12153 chr2 113950089 113950089 1 + A G LIHC 113950088 + 113950068 113950108 41 TGGCGTCAGGAACAACAAGGTAGCCTGGAACTTGGCCTCAC TGGCGTCAGGAACAACAAGGTGGCCTGGAACTTGGCCTCAC < 41bp 0.808269889498357 0.368600131968262 0.61142194 0.27446258 prediction 0.616539778996714 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113950088 chr2:113950089 synonymous SNV . 0 22 hPsi_associated_SNPs_6736 0 0 1 0 1 chromatin 0.438718590362423 0.438718595163315 0.22284388 0 hPsi_site_12153 iPseU_CNN:0.22284388;iRNA_PseU:0 12154 chr1 223177480 223177480 1 + T G UCEC 223177479 + 223177459 223177499 41 GCAAAACCCCAGGGCCGAGGTTTGATATCAATGATACTATC GCAAAACCCCAGGGCCGAGGTGTGATATCAATGATACTATC < 41bp 0.808248082331383 0.488808311097026 0.2713884 0.23044544 prediction 0.616496164662766 Functional Loss - DISP1 ENSG00000154309 CDS Human protein_coding chr1:223177479 chr1:223177480 nonsynonymous SNV 0.970 5 22 hPsi_associated_SNPs_6737 0 0 0 0 0 Cytosol 0.438718592851029 0.438718587392005 0 0 hPsi_site_12154 iPseU_CNN:0;iRNA_PseU:0 12155 chr18 33736469 33736469 1 + A G rs571352087 33736468 + 33736448 33736488 41 CAAGGCCTCAGATACATGGGTATGACCTGAAATGTTTGGCA CAAGGCCTCAGATACATGGGTGTGACCTGAAATGTTTGGCA < 41bp 0.911621725189963 0.603377452028443 0.32397115 0.21661279 prediction 0.616488546323039 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33736468 chr18:33736469 nonsynonymous SNV 0.951 4 22 hPsi_associated_SNPs_6738 0 0 1 0 1 Nucleus 0.438695742423174 0.438639399159194 0 0 hPsi_site_12155 iPseU_CNN:0;iRNA_PseU:0 12156 chr8 132991162 132991162 1 + A G rs147563341 132991161 + 132991141 132991181 41 GTCTTTCCTGGATCCTTTGTTATCACCATCTCTCATGGAGG GTCTTTCCTGGATCCTTTGTTGTCACCATCTCTCATGGAGG < 41bp 0.907660481726737 0.59941855360183 0.41346622 0.24706072 prediction 0.616483856249815 Functional Loss - EFR3A ENSG00000132294 CDS Human protein_coding chr8:132991161 chr8:132991162 synonymous SNV . 0 22 hPsi_associated_SNPs_6739 0 0 1 0 1 Cytosol 0.438718592909208 0.43871859139297 0 0 hPsi_site_12156 iPseU_CNN:0;iRNA_PseU:0 12157 chr7 43548658 43548658 1 + A C LUSC 43548659 - 43548639 43548679 41 CTGCACCGTGTAAGTATCATTTGCCGAGTACTCAAAGAGTC CTGCACCGTGTAAGTATCATTGGCCGAGTACTCAAAGAGTC < 41bp 0.821950322967581 0.513721526756605 0.46019852 0.29733747 prediction 0.616457592421952 Functional Loss - HECW1 ENSG00000002746 CDS Human protein_coding chr7:43548659 chr7:43548658 synonymous SNV . 0 22 hPsi_associated_SNPs_6740 0 0 0 0 0 Cytosol 0.438504292133309 0.438718583842941 0 0 hPsi_site_12157 iPseU_CNN:0;iRNA_PseU:0 12158 chr12 130851726 130851726 1 + T G HNSC 130851725 + 130851705 130851745 41 GAAAAGAGTGAACACCAGATTTTTTGCTCAGTCTGGAGGAA GAAAAGAGTGAACACCAGATTGTTTGCTCAGTCTGGAGGAA < 41bp 0.847663815685067 0.539451958580163 0.30584168 0.24210763 prediction 0.616423714209809 Functional Loss - PIWIL1 ENSG00000125207 CDS Human protein_coding chr12:130851725 chr12:130851726 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_6741 0 0 0 0 2 Nucleus 0.438720891804776 0.43863275811479 0 0 hPsi_site_12158 iPseU_CNN:0;iRNA_PseU:0 12159 chr3 39373946 39373946 1 + T G UCEC 39373945 + 39373925 39373965 41 AAGTTGCTCCTTGCTGTCTTTTATTGCCTCCTGTTTGTATT AAGTTGCTCCTTGCTGTCTTTGATTGCCTCCTGTTTGTATT < 41bp 0.808204899552962 0.499984457797046 0.38946214 0.27993602 prediction 0.616409799105925 Functional Loss - CCR8 ENSG00000179934 CDS Human protein_coding chr3:39373945 chr3:39373946 nonsynonymous SNV 0.225 4 22 hPsi_associated_SNPs_6742 0 0 0 0 0 exosome 0.438726228242373 0.438719370168645 0 0 hPsi_site_12159 iPseU_CNN:0;iRNA_PseU:0 12160 chr5 132018237 132018237 1 + A G DLBC 132018236 + 132018216 132018256 41 GGAAAACTTCTTGGAAAGGCTAAAGACGATCATGAGAGAGA GGAAAACTTCTTGGAAAGGCTGAAGACGATCATGAGAGAGA < 41bp 0.899862464403796 0.591676619601057 0.39556897 0.2616549 prediction 0.61637168960548 Functional Loss - IL4 ENSG00000113520 CDS Human protein_coding chr5:132018236 chr5:132018237 synonymous SNV . 0 22 hPsi_associated_SNPs_6743 0 0 0 0 1 exosome 0.438718836439354 0.43871859384506 0 0 hPsi_site_12160 iPseU_CNN:0;iRNA_PseU:0 12161 chr8 73937103 73937103 1 + T G COAD 73937102 + 73937082 73937122 41 TAATCTCTCAGAAAGATACATTTCATTCCTTTTTTCAACAC TAATCTCTCAGAAAGATACATGTCATTCCTTTTTTCAACAC < 41bp 0.808176050602233 0.472770321225406 0.297621 0.20117861 prediction 0.616352101204467 Functional Loss - TERF1 ENSG00000147601 CDS Human protein_coding chr8:73937102 chr8:73937103 nonsynonymous SNV 0.201 1 22 hPsi_associated_SNPs_6744 0 0 0 0 1 Nucleus 0.438716075383421 0.438627589191963 0 0 hPsi_site_12161 iPseU_CNN:0;iRNA_PseU:0 12162 chr1 76257164 76257164 1 + A G UCEC 76257163 + 76257143 76257183 41 TAGGGGAAGCTTGATGCTATTAATGTGGAAAAGGCAATCGA TAGGGGAAGCTTGATGCTATTGATGTGGAAAAGGCAATCGA < 41bp 0.808165679689585 0.41130417446391 0.5361069 0.4156018 prediction 0.61633135937917 Functional Loss - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76257163 chr1:76257164 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6745 0 0 1 0 2 Nucleus 0.438829132862325 0.438718489787662 0.0722138000000001 0 hPsi_site_12162 iPseU_CNN:0.0722138000000001;iRNA_PseU:0 12163 chr7 99799867 99799867 1 + A G UCEC 99799866 + 99799846 99799886 41 GTTGGGGGCCGTGATTTCCTTAGGCCACTTGTCTTTTTTCC GTTGGGGGCCGTGATTTCCTTGGGCCACTTGTCTTTTTTCC < 41bp 0.917423463747697 0.609258823091557 0.36151856 0.2848997 prediction 0.616329281312279 Functional Loss - STAG3 ENSG00000066923 CDS Human protein_coding chr7:99799866 chr7:99799867 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_6746 0 0 0 0 2 exosome 0.438718594155054 0.438718594457125 0 0 hPsi_site_12163 iPseU_CNN:0;iRNA_PseU:0 12164 chr11 30255127 30255127 1 + A G CHOL 30255126 + 30255106 30255146 41 AAACTCCTCAGGATCTGGTGTATAAGGACCCAGCCAGGCCC AAACTCCTCAGGATCTGGTGTGTAAGGACCCAGCCAGGCCC < 41bp 0.808153216856182 0.420684721048572 0.50476444 0.29755926 prediction 0.616306433712364 Functional Loss - FSHB ENSG00000131808 CDS Human protein_coding chr11:30255126 chr11:30255127 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_6747 0 0 0 0 1 unknown 0.438718593008257 0.438718593014041 0.00952887999999996 0 hPsi_site_12164 iPseU_CNN:0.00952887999999996;iRNA_PseU:0 12165 chr1 212515555 212515555 1 + T G STAD 212515554 + 212515534 212515574 41 TATATGAATTCTTCTTGAGATTTTTGGAGAGCCCTGATTTC TATATGAATTCTTCTTGAGATGTTTGGAGAGCCCTGATTTC < 41bp 0.808146519057498 0.467803826877438 0.34214994 0.2853694 prediction 0.616293038114996 Functional Loss - PPP2R5A ENSG00000066027 CDS Human protein_coding chr1:212515554 chr1:212515555 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6748 0 0 1 0 2 Ribosome 0.438718593638688 0.4387186598892 0 0 hPsi_site_12165 iPseU_CNN:0;iRNA_PseU:0 12166 chr17 47905088 47905088 1 + A G rs142114632 47905087 + 47905067 47905107 41 GGTTGCCTGGATGGGATCTGTATTAGACTTGAGTGCAGGTC GGTTGCCTGGATGGGATCTGTGTTAGACTTGAGTGCAGGTC < 41bp 0.895685892805192 0.587547216478391 0.65591556 0.4041505 prediction 0.616277352653601 Functional Loss - KAT7 ENSG00000136504 UTR3 Human protein_coding chr17:47905087 chr17:47905088 . . 0 22 hPsi_associated_SNPs_6749 0 0 0 0 0 Cytosol 0.438717958684882 0.438712168237368 0.31183112 0 hPsi_site_12166 iPseU_CNN:0.31183112;iRNA_PseU:0 12167 chr8 145151639 145151639 1 + T G STAD 145151638 + 145151618 145151658 41 TCTACACAGATGTCTTAGAGTTTGACGATGGTAAGAGGCCT TCTACACAGATGTCTTAGAGTGTGACGATGGTAAGAGGCCT < 41bp 0.814892181922191 0.506762376203083 0.23367539 0.15884101 prediction 0.616259611438216 Functional Loss - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151638 chr8:145151639 nonsynonymous SNV 0.924 3 22 hPsi_associated_SNPs_6750 0 0 1 0 1 Ribosome 0.438719722241129 0.438720367684856 0 0 hPsi_site_12167 iPseU_CNN:0;iRNA_PseU:0 12168 chr16 50138929 50138929 1 + T G UCEC 50138928 + 50138908 50138948 41 TGAAAATGAATTTGCGAAGATTTATTGCTTATCAAGAAACT TGAAAATGAATTTGCGAAGATGTATTGCTTATCAAGAAACT < 41bp 0.832219791169677 0.524095000562334 0.27340943 0.28404802 prediction 0.616249581214686 Functional Loss - HEATR3 ENSG00000155393 CDS Human protein_coding chr16:50138928 chr16:50138929 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6751 0 0 1 0 1 Ribosome 0.438718792915508 0.438505049497291 0 0 hPsi_site_12168 iPseU_CNN:0;iRNA_PseU:0 12169 chr1 217915421 217915421 1 + A G STAD 217915420 + 217915400 217915440 41 ACCAAGCCCGAAAGATGCATTACCTCCTCAGCACAAAGCAG ACCAAGCCCGAAAGATGCATTGCCTCCTCAGCACAAAGCAG < 41bp 0.80812295576421 0.390885048309817 0.687866 0.28545249 prediction 0.61624591152842 Functional Loss - SPATA17 ENSG00000162814 CDS Human protein_coding chr1:217915420 chr1:217915421 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6752 0 0 0 1 1 Cytosol 0.438718590876901 0.43871883694095 0.375732 0 hPsi_site_12169 iPseU_CNN:0.375732;iRNA_PseU:0 12170 chr2 200789857 200789857 1 + A G UCEC 200789856 + 200789836 200789876 41 TGGAGTCTAGAAAATGTTGCTACCATTTTAGCCCACCGGTT TGGAGTCTAGAAAATGTTGCTGCCATTTTAGCCCACCGGTT < 41bp 0.899292443427194 0.591199925712897 0.39123994 0.27975547 prediction 0.616185035428592 Functional Loss - C2orf69 ENSG00000178074 CDS Human protein_coding chr2:200789856 chr2:200789857 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_6753 0 0 1 0 1 insoluble cytoplasm 0.438718595167497 0.438718296907349 0 0 hPsi_site_12170 iPseU_CNN:0;iRNA_PseU:0 12171 chr5 128796140 128796140 1 + A C GBM 128796139 + 128796119 128796159 41 TCTGCTGCTGCTGCCTCCTTTACCAGCTGGGGTTCCTGTCG TCTGCTGCTGCTGCCTCCTTTCCCAGCTGGGGTTCCTGTCG < 41bp 0.808088210627727 0.454566339256263 0.2801036 0.25677547 prediction 0.616176421255454 Functional Loss - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:128796139 chr5:128796140 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_6754 0 0 0 0 1 exosome 0.438640245690962 0.438760374549638 0 0 hPsi_site_12171 iPseU_CNN:0;iRNA_PseU:0 12172 chr6 44217133 44217133 1 + A G UCEC 44217132 + 44217112 44217152 41 AGGCCTTGGACAAGATTCGCTATGAGAGCCTGACAGACCCT AGGCCTTGGACAAGATTCGCTGTGAGAGCCTGACAGACCCT < 41bp 0.808075243501072 0.388435257645167 0.3461545 0.34707272 prediction 0.616150487002145 Functional Loss - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44217132 chr6:44217133 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_6755 0 0 1 0 1 Nucleus 0.438666066121229 0.438828300965753 0 0 hPsi_site_12172 iPseU_CNN:0;iRNA_PseU:0 12173 chr4 124323657 124323657 1 + A G LGG 124323656 + 124323636 124323676 41 GTAAGAACTCCAACACTGTCTATTGTAAGCTGGAGAGCTGC GTAAGAACTCCAACACTGTCTGTTGTAAGCTGGAGAGCTGC < 41bp 0.808073417770926 0.391255273604024 0.26702207 0.26771817 prediction 0.616146835541853 Functional Loss - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124323656 chr4:124323657 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6756 0 0 1 0 0 nucleus 0.438315673446867 0.438198501836194 0 0 hPsi_site_12173 iPseU_CNN:0;iRNA_PseU:0 12174 chr19 57999121 57999121 1 + A G rs111473875 57999120 + 57999100 57999140 41 ACTTCCGGCGTCTCGTTTGGTATTCACTTTCGCGACTCAGG ACTTCCGGCGTCTCGTTTGGTGTTCACTTTCGCGACTCAGG < 41bp 0.808044217707472 0.400031175584054 0.6368898 0.23036721 prediction 0.616088435414945 Functional Loss - ZNF419 ENSG00000105136;ENSG00000268107 UTR5 Human other chr19:57999120 chr19:57999121 . . 0 22 hPsi_associated_SNPs_6757 0 0 1 0 0 exosome 0.438695825487037 0.438563562454955 0.2737796 0 hPsi_site_12174 iPseU_CNN:0.2737796;iRNA_PseU:0 12175 chr5 176863239 176863239 1 + A C KIRC 176863238 + 176863218 176863258 41 TGAAGGAGGTCCCCGAGGAGTATTCCGAGCGCTTTTCCCCG TGAAGGAGGTCCCCGAGGAGTCTTCCGAGCGCTTTTCCCCG < 41bp 0.878848662799561 0.570807269655213 0.6171266 0.2960313 prediction 0.616082786288697 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863238 chr5:176863239 nonsynonymous SNV 0.464 4 22 hPsi_associated_SNPs_6758 0 0 1 0 1 Cytosol 0.438718594481182 0.438718592995103 0.2342532 0 hPsi_site_12175 iPseU_CNN:0.2342532;iRNA_PseU:0 12176 chr10 89725445 89725445 1 + A G rs558365328 89725444 + 89725424 89725464 41 GGTTGTGTAGCTGTGTCATGTATATACCTTTTTGTGTCAAA GGTTGTGTAGCTGTGTCATGTGTATACCTTTTTGTGTCAAA < 41bp 0.808033367003901 0.434039360403667 0.49149102 0.31375614 prediction 0.616066734007802 Functional Loss - PTEN ENSG00000171862 UTR3 Human protein_coding chr10:89725444 chr10:89725445 . . 0 22 hPsi_associated_SNPs_6759 0 0 0 1 0 Ribosome 0.438585065386583 0.44296280796336 0 0 hPsi_site_12176 iPseU_CNN:0;iRNA_PseU:0 12177 chr11 121177888 121177888 1 + A G UCEC 121177887 + 121177867 121177907 41 ATACCCTTTTATCTTTCCATTACACAAGGTGGTTTATTTAA ATACCCTTTTATCTTTCCATTGCACAAGGTGGTTTATTTAA < 41bp 0.808032506189279 0.416221928550904 0.28744873 0.2156755 prediction 0.616065012378557 Functional Loss - SC5D ENSG00000109929 CDS Human protein_coding chr11:121177887 chr11:121177888 synonymous SNV . 0 22 hPsi_associated_SNPs_6760 0 0 1 0 0 Ribosome 0.438704856686841 0.438705826126998 0 0 hPsi_site_12177 iPseU_CNN:0;iRNA_PseU:0 12178 chr1 2428342 2428342 1 + A G LUAD 2428341 + 2428321 2428361 41 TGCAGCAGAAGCCGGCGCAGTACCTACGCTTCAACCAGCAG TGCAGCAGAAGCCGGCGCAGTGCCTACGCTTCAACCAGCAG < 41bp 0.912164289601633 0.604147102155033 0.7103253 0.23863187 prediction 0.616034374893199 Functional Loss - PLCH2 ENSG00000149527 CDS Human protein_coding chr1:2428341 chr1:2428342 nonsynonymous SNV 0.867 4 22 hPsi_associated_SNPs_6761 0 0 0 0 1 nucleus 0.443222096537153 0.438889652424407 0.4206506 0 hPsi_site_12178 iPseU_CNN:0.4206506;iRNA_PseU:0 12179 chr3 183472089 183472089 1 + T G SKCM 183472088 + 183472068 183472108 41 AATTGTTCCACAAAGTCAGGTTCCTAATCCTGAGTCACCTG AATTGTTCCACAAAGTCAGGTGCCTAATCCTGAGTCACCTG < 41bp 0.808011816566886 0.464221699274868 0.3669089 0.21095225 prediction 0.616023633133773 Functional Loss - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183472088 chr3:183472089 synonymous SNV . 0 22 hPsi_associated_SNPs_6762 0 0 1 0 1 Nucleus 0.438573250621451 0.438581443760463 0 0 hPsi_site_12179 iPseU_CNN:0;iRNA_PseU:0 12180 chr17 641106 641106 1 + A G UCEC 641105 + 641085 641125 41 GGCACTGGCTTGCCCGGGAATATGTGTGGTTTCTGATTCCA GGCACTGGCTTGCCCGGGAATGTGTGTGGTTTCTGATTCCA < 41bp 0.808004616534769 0.378204445232364 0.7308444 0.6434338 prediction 0.616009233069537 Functional Loss - FAM57A ENSG00000167695 CDS Human protein_coding chr17:641105 chr17:641106 nonsynonymous SNV 0.988 5 22 hPsi_associated_SNPs_6763 0 0 1 0 1 Ribosome 0.438719474059052 0.438718757565361 0.1748212 0 hPsi_site_12180 iPseU_CNN:0.1748212;iRNA_PseU:0 12181 chr2 178081428 178081428 1 + T G UCEC 178081427 + 178081407 178081447 41 GTGGAGGTGGATCTGGCAATTTTATGGGTCGCGGAGGGAAC GTGGAGGTGGATCTGGCAATTGTATGGGTCGCGGAGGGAAC < 41bp 0.852634485602794 0.544651565223069 0.7301975 0.35835057 prediction 0.61596584075945 Functional Loss - HNRNPA3 ENSG00000170144 CDS Human protein_coding chr2:178081427 chr2:178081428 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6764 0 0 1 0 1 Cytosol 0.438843054817413 0.437554843611773 0.460395 0 hPsi_site_12181 iPseU_CNN:0.460395;iRNA_PseU:0 12182 chr17 79214814 79214814 1 + T G DLBC 79214813 + 79214793 79214833 41 AAGACGCTGGAGGGAGGCTGTTAGGAGGGACTCTGAGCTTC AAGACGCTGGAGGGAGGCTGTGAGGAGGGACTCTGAGCTTC < 41bp 0.822239359776011 0.514261920717665 0.4343183 0.3748449 prediction 0.615954878116691 Functional Loss - NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79214813 chr17:79214814 stoploss 0.109 0 22 hPsi_associated_SNPs_6765 0 0 1 0 1 unknown 0.438718592995094 0.438718593020768 0 0 hPsi_site_12182 iPseU_CNN:0;iRNA_PseU:0 12183 chr19 44681538 44681538 1 + T G rs528299115 44681537 + 44681517 44681557 41 GTGGGGAGTGTGGTAAGTACTTCAGTCAGGCCTCAAGTCTT GTGGGGAGTGTGGTAAGTACTGCAGTCAGGCCTCAAGTCTT < 41bp 0.808238701740145 0.500266071383704 0.71449786 0.6276264 prediction 0.615945260712882 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681537 chr19:44681538 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6766 0 0 1 0 0 Cytosol 0.438719289752305 0.43939043431155 0.17374292 0 hPsi_site_12183 iPseU_CNN:0.17374292;iRNA_PseU:0 12184 chr10 112266724 112266724 1 + A G HNSC 112266723 + 112266703 112266743 41 TTGAAATCCTTCCCTTCCTCTACCTTGGAAGTGCCTACCAT TTGAAATCCTTCCCTTCCTCTGCCTTGGAAGTGCCTACCAT < 41bp 0.807966553877525 0.375334854711516 0.79113555 0.3096187 prediction 0.61593310775505 Functional Loss - DUSP5 ENSG00000138166 CDS Human protein_coding chr10:112266723 chr10:112266724 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6767 0 0 1 0 0 Cytosol 0.438718592995178 0.438718592995103 0.5822711 0 hPsi_site_12184 iPseU_CNN:0.5822711;iRNA_PseU:0 12185 chr9 36170814 36170814 1 + A G COAD 36170813 + 36170793 36170833 41 CGGTGCTTGGTGAAAGGTTATATCTCCCGGGTCGGGGTAGT CGGTGCTTGGTGAAAGGTTATGTCTCCCGGGTCGGGGTAGT < 41bp 0.907452726884639 0.59951142943613 0.6830747 0.4512233 prediction 0.615882594897016 Functional Loss - CCIN ENSG00000185972 CDS Human protein_coding chr9:36170813 chr9:36170814 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_6768 0 0 0 0 0 exosome 0.438721527212393 0.438717805588112 0.3661494 0 hPsi_site_12185 iPseU_CNN:0.3661494;iRNA_PseU:0 12186 chr16 49407926 49407926 1 + A G UCEC 49407925 + 49407905 49407945 41 ATGTGGAAGACTGCTGAAGATAGGCGCATGTCTGACCTCAC ATGTGGAAGACTGCTGAAGATGGGCGCATGTCTGACCTCAC < 41bp 0.905760175127023 0.597828576088831 0.66898495 0.273095 prediction 0.615863198076384 Functional Loss - C16orf78 ENSG00000166152 CDS Human protein_coding chr16:49407925 chr16:49407926 nonsynonymous SNV 0.319 4 22 hPsi_associated_SNPs_6769 0 0 0 0 1 exosome 0.438716385252192 0.4387380650674 0.3379699 0 hPsi_site_12186 iPseU_CNN:0.3379699;iRNA_PseU:0 12187 chrX 102192321 102192321 1 + A G rs61745027 102192320 + 102192300 102192340 41 GCTGGTGGGCGACAGGGACGTAGGCAAGAGTGAGATCCTGG GCTGGTGGGCGACAGGGACGTGGGCAAGAGTGAGATCCTGG < 41bp 0.807928223029089 0.409196936230421 0.6659304 0.240538 prediction 0.615856446058177 Functional Loss - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192320 chrX:102192321 synonymous SNV . 0 22 hPsi_associated_SNPs_6770 0 0 0 0 0 exosome 0.438718332553011 0.438510371138252 0.3318608 0 hPsi_site_12187 iPseU_CNN:0.3318608;iRNA_PseU:0 12188 chr7 128133954 128133954 1 + A G LIHC 128133953 + 128133933 128133973 41 GTGCCCAAGGGCAGTCTTGATATTATCATTCTCATATTTGT GTGCCCAAGGGCAGTCTTGATGTTATCATTCTCATATTTGT < 41bp 0.908879276147379 0.600988118936792 0.37051946 0.23539686 prediction 0.615782314421173 Functional Loss - METTL2B ENSG00000165055 CDS Human protein_coding chr7:128133953 chr7:128133954 nonsynonymous SNV 0.966 0 22 hPsi_associated_SNPs_6771 0 0 0 0 2 Ribosome 0.438718427968573 0.438717816049295 0 0 hPsi_site_12188 iPseU_CNN:0;iRNA_PseU:0 12189 chr18 196666 196666 1 + A G STAD 196665 + 196645 196685 41 GATTTGTTTGATTCCATGGATAAAACTTCTTCCAGTATTCC GATTTGTTTGATTCCATGGATGAAACTTCTTCCAGTATTCC < 41bp 0.807889236439524 0.396828447027269 0.3302188 0.24927199 prediction 0.615778472879048 Functional Loss - USP14 ENSG00000101557 CDS Human protein_coding chr18:196665 chr18:196666 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6772 0 0 1 0 1 Nucleus 0.438718591826932 0.438718591035298 0 0 hPsi_site_12189 iPseU_CNN:0;iRNA_PseU:0 12190 chr11 111430909 111430909 1 + A G STAD 111430908 + 111430888 111430928 41 ACAGCCCGGACCTAGAGGTCTACAATGTCATAAGAAAACAA ACAGCCCGGACCTAGAGGTCTGCAATGTCATAAGAAAACAA < 41bp 0.807878555274347 0.398212518973185 0.5503355 0.30427712 prediction 0.615757110548695 Functional Loss - LAYN ENSG00000204381 CDS Human protein_coding chr11:111430908 chr11:111430909 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6773 0 0 0 1 1 exosome 0.438714951964209 0.438716048126602 0.100671 0 hPsi_site_12190 iPseU_CNN:0.100671;iRNA_PseU:0 12191 chr7 6631364 6631364 1 + A G UCEC 6631363 + 6631343 6631383 41 AAGGACTCTGTTCGGCAGATTATTTTTTCATCCCTTTTCAG AAGGACTCTGTTCGGCAGATTGTTTTTTCATCCCTTTTCAG < 41bp 0.910130953075349 0.602258278780655 0.34311897 0.33283317 prediction 0.615745348589389 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631363 chr7:6631364 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6774 0 0 1 0 2 chromatin 0.438718562663174 0.438717664017891 0 0 hPsi_site_12191 iPseU_CNN:0;iRNA_PseU:0 12192 chr7 142563773 142563773 1 + A G COAD 142563772 + 142563752 142563792 41 GCAAGGCTCAGCACTCATGCTACACTGGCGCCTGCCTCGGG GCAAGGCTCAGCACTCATGCTGCACTGGCGCCTGCCTCGGG < 41bp 0.917031192395177 0.609165501170425 0.74951875 0.30515718 prediction 0.615731382449505 Functional Loss - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142563772 chr7:142563773 synonymous SNV . 0 22 hPsi_associated_SNPs_6775 0 0 0 0 1 Endoplasmic reticulum 0.438764151779252 0.43789556536389 0.4990375 0 hPsi_site_12192 iPseU_CNN:0.4990375;iRNA_PseU:0 12193 chr12 55759420 55759420 1 + A G rs145389824 55759419 + 55759399 55759439 41 TCCAATGTAATTGATCATTTTATCTGTGACTCTTCTCCAAT TCCAATGTAATTGATCATTTTGTCTGTGACTCTTCTCCAAT < 41bp 0.807854821812619 0.40862023442918 0.35924178 0.30440298 prediction 0.615709643625239 Functional Loss - OR6C75 ENSG00000187857 CDS Human protein_coding chr12:55759419 chr12:55759420 nonsynonymous SNV 0.078 0 22 hPsi_associated_SNPs_6776 0 0 0 0 0 unknown 0.441886106716348 0.439405771022796 0 0 hPsi_site_12193 iPseU_CNN:0;iRNA_PseU:0 12194 chr20 56993359 56993359 1 + A G UCEC 56993358 + 56993338 56993378 41 GTGAAGACTACAGCACCACGTAGGTACTGTGTGAGGCCCAA GTGAAGACTACAGCACCACGTGGGTACTGTGTGAGGCCCAA < 41bp 0.80784938604637 0.384724303153405 0.26228166 0.22365516 prediction 0.61569877209274 Functional Loss - VAPB ENSG00000124164 CDS Human protein_coding chr20:56993358 chr20:56993359 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_6777 0 0 1 2 2 Ribosome 0.438667941075226 0.439696605558568 0 0 hPsi_site_12194 iPseU_CNN:0;iRNA_PseU:0 12195 chr11 119045826 119045826 1 + A C UCEC 119045825 + 119045805 119045845 41 AGGAATACCTGGCTGCCCTCTACATTGTGCTGGGTTTGCGC AGGAATACCTGGCTGCCCTCTCCATTGTGCTGGGTTTGCGC < 41bp 0.87650523716544 0.568665105002106 0.4669497 0.34682962 prediction 0.615680264326668 Functional Loss - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119045825 chr11:119045826 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6778 0 0 0 0 0 exosome 0.438718566256786 0.438719934186496 0 0 hPsi_site_12195 iPseU_CNN:0;iRNA_PseU:0 12196 chr11 63312225 63312225 1 + A G UCEC 63312224 + 63312204 63312244 41 ACAACAGCTTGGACCATGAGTACCAACCACGGCCCGTGGAG ACAACAGCTTGGACCATGAGTGCCAACCACGGCCCGTGGAG < 41bp 0.912561981106324 0.604722689435812 0.45691702 0.24458274 prediction 0.615678583341024 Functional Loss - RARRES3 ENSG00000133321 CDS Human protein_coding chr11:63312224 chr11:63312225 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_6779 0 0 0 0 0 exosome 0.438704551278746 0.439085415961974 0 0 hPsi_site_12196 iPseU_CNN:0;iRNA_PseU:0 12197 chr3 134898723 134898723 1 + A G CESC 134898722 + 134898702 134898742 41 GCTCCCCAGGGATGAAGATCTACATTGACCCCTTCACTTAC GCTCCCCAGGGATGAAGATCTGCATTGACCCCTTCACTTAC < 41bp 0.807823961303852 0.390516065520319 0.56750274 0.3825698 prediction 0.615647922607705 Functional Loss - EPHB1 ENSG00000154928 CDS Human protein_coding chr3:134898722 chr3:134898723 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6780 0 0 0 0 1 exosome 0.43857727629956 0.438664078772755 0.13500548 0 hPsi_site_12197 iPseU_CNN:0.13500548;iRNA_PseU:0 12198 chr17 58701061 58701061 1 + A G STAD 58701060 + 58701040 58701080 41 GTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAGGA GTGGAGGTGACACAGGACCATGAGCCAGAACTTCCCAAGGA < 41bp 0.807819185295619 0.403203452138784 0.28688127 0.21934733 prediction 0.615638370591237 Functional Loss - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58701060 chr17:58701061 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6781 0 0 1 0 1 Cytosol 0.438915791081072 0.438718690320908 0 0 hPsi_site_12198 iPseU_CNN:0;iRNA_PseU:0 12199 chr3 183818284 183818284 1 + A C LUSC 183818283 + 183818263 183818303 41 TCCACTACAGGAAGGGGCGTTACTTTCACCATCAATTGCTC TCCACTACAGGAAGGGGCGTTCCTTTCACCATCAATTGCTC < 41bp 0.875729820277595 0.567921571251005 0.48592666 0.23425338 prediction 0.615616498053179 Functional Loss - HTR3E ENSG00000186038 CDS Human protein_coding chr3:183818283 chr3:183818284 nonsynonymous SNV 0.602 2 22 hPsi_associated_SNPs_6782 0 0 0 0 1 unknown 0.438500723184711 0.438662495996888 0 0 hPsi_site_12199 iPseU_CNN:0;iRNA_PseU:0 12200 chr3 142521117 142521117 1 + A G rs539219403 142521116 + 142521096 142521136 41 CACAACTGTATGATAAAGGATATACTTCAAAGGAGCAGAAG CACAACTGTATGATAAAGGATGTACTTCAAAGGAGCAGAAG < 41bp 0.807784574223304 0.393217104793282 0.42428222 0.27370444 prediction 0.615569148446607 Functional Loss - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142521116 chr3:142521117 nonsynonymous SNV 0.727 4 22 hPsi_associated_SNPs_6783 0 0 1 0 1 Ribosome 0.438731540643539 0.439228364601232 0 0 hPsi_site_12200 iPseU_CNN:0;iRNA_PseU:0 12201 chr1 22304871 22304871 1 + A G LIHC 22304870 + 22304850 22304890 41 TCTCCCCTCTAGCCTCAGGCTATGGCCCACCTTCCTCTCGC TCTCCCCTCTAGCCTCAGGCTGTGGCCCACCTTCCTCTCGC < 41bp 0.907402165073913 0.599627268735838 0.50740016 0.33999452 prediction 0.615549792676151 Functional Loss - CELA3B ENSG00000219073 CDS Human protein_coding chr1:22304870 chr1:22304871 nonsynonymous SNV 0.055 1 22 hPsi_associated_SNPs_6784 0 0 0 0 2 unknown 0.438718592997009 0.438718593087337 0.01480032 0 hPsi_site_12201 iPseU_CNN:0.01480032;iRNA_PseU:0 12202 chr8 1950761 1950761 1 + A G rs140699745 1950760 + 1950740 1950780 41 TGTCCGGGGGCTCCCTCTTCTATCGCCTGCTCAAGTATGAC TGTCCGGGGGCTCCCTCTTCTGTCGCCTGCTCAAGTATGAC < 41bp 0.905085919357127 0.597329361455042 0.40532938 0.27458206 prediction 0.615513115804171 Functional Loss - KBTBD11 ENSG00000176595 CDS Human protein_coding chr8:1950760 chr8:1950761 nonsynonymous SNV 0.917 2 22 hPsi_associated_SNPs_6785 0 0 1 0 0 exosome 0.438718556652357 0.438718580137137 0 0 hPsi_site_12202 iPseU_CNN:0;iRNA_PseU:0 12203 chr15 41961691 41961691 1 + A C LGG 41961690 + 41961670 41961710 41 TCTTGCACTCTATGCATCGTTACCTGCCGAGGCTTCATTTG TCTTGCACTCTATGCATCGTTCCCTGCCGAGGCTTCATTTG < 41bp 0.807745397429828 0.439769691206123 0.6324103 0.30800664 prediction 0.615490794859656 Functional Loss - MGA ENSG00000174197 CDS Human protein_coding chr15:41961690 chr15:41961691 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_6786 0 0 1 0 0 Cytosol 0.439633819655247 0.438744577527228 0.2648206 0 hPsi_site_12203 iPseU_CNN:0.2648206;iRNA_PseU:0 12204 chr17 26822805 26822805 1 + A G LUAD 26822804 + 26822784 26822824 41 ACTAGCAACGTGGCCACCACTACGATCTTCCTGCCCATCCT ACTAGCAACGTGGCCACCACTGCGATCTTCCTGCCCATCCT < 41bp 0.91095495307873 0.60324343361898 0.23591432 0.20005006 prediction 0.615423038919501 Functional Loss - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26822804 chr17:26822805 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_6787 0 0 0 0 1 unknown 0.44137264980124 0.444040884309065 0 0 hPsi_site_12204 iPseU_CNN:0;iRNA_PseU:0 12205 chr21 37510176 37510176 1 + T G UCEC 37510175 + 37510155 37510195 41 GAGATGACACTGAAGACAAATTTTTTTGCCACTAGAAACAT GAGATGACACTGAAGACAAATGTTTTTGCCACTAGAAACAT < 41bp 0.850537368809281 0.542833862668593 0.15605426 0.12228948 prediction 0.615407012281378 Functional Loss - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37510175 chr21:37510176 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_6788 0 0 0 0 2 exosome 0.439472520211755 0.435509851934067 0 0 hPsi_site_12205 iPseU_CNN:0;iRNA_PseU:0 12206 chr15 76225400 76225400 1 + A G LUSC 76225399 + 76225379 76225419 41 ATGATGATCTGTTTCATAGCTATACAACAATAATGGCACTC ATGATGATCTGTTTCATAGCTGTACAACAATAATGGCACTC < 41bp 0.807689427489356 0.419479173124915 0.42255455 0.19999558 prediction 0.615378854978711 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76225399 chr15:76225400 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_6789 0 0 1 0 0 Cytosol 0.437580315751948 0.433594318124463 0 0 hPsi_site_12206 iPseU_CNN:0;iRNA_PseU:0 12207 chr9 133932392 133932392 1 + T G UCEC 133932391 + 133932371 133932411 41 GCCAGCCTCCTGGGTGGAGATTTGTTCATGTCCCACTGGCT GCCAGCCTCCTGGGTGGAGATGTGTTCATGTCCCACTGGCT < 41bp 0.807645360514388 0.482112684760167 0.6240048 0.34293032 prediction 0.615290721028775 Functional Loss - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133932391 chr9:133932392 nonsynonymous SNV 0.572 0 22 hPsi_associated_SNPs_6790 0 0 0 0 1 chromatin 0.438718317491484 0.438734455334085 0.2480096 0 hPsi_site_12207 iPseU_CNN:0.2480096;iRNA_PseU:0 12208 chr19 14674876 14674876 1 + A G LUAD 14674875 + 14674855 14674895 41 CCTTCATCTATGGCCACAAATATGACTTTACGTCCAGTCGG CCTTCATCTATGGCCACAAATGTGACTTTACGTCCAGTCGG < 41bp 0.80763624761929 0.384897306029834 0.13490793 0.13927436 prediction 0.615272495238581 Functional Loss - TECR ENSG00000099797 CDS Human protein_coding chr19:14674875 chr19:14674876 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_6791 0 0 1 0 2 Ribosome 0.438818370076785 0.438719792769953 0 0 hPsi_site_12208 iPseU_CNN:0;iRNA_PseU:0 12209 chr14 31355476 31355476 1 + T C KIRP 31355477 - 31355457 31355497 41 CAGGGCCTTGGACATCATCATAGGACTGCCCATCTGTGACA CAGGGCCTTGGACATCATCATGGGACTGCCCATCTGTGACA < 41bp 0.807634373156078 0.404278691623723 0.24169162 0.13779855 prediction 0.615268746312156 Functional Loss - COCH ENSG00000100473 CDS Human protein_coding chr14:31355477 chr14:31355476 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6792 0 0 1 0 1 Cytosol 0.438715085914436 0.438738391041927 0 0 hPsi_site_12209 iPseU_CNN:0;iRNA_PseU:0 12210 chr15 69689866 69689866 1 + A G UCEC 69689865 + 69689845 69689885 41 TTCGTGTCCTCGCCTTTGCTTATCCGTACACCTGGGACTCC TTCGTGTCCTCGCCTTTGCTTGTCCGTACACCTGGGACTCC < 41bp 0.807632557605428 0.368177802987591 0.755815 0.47394234 prediction 0.615265115210857 Functional Loss - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69689865 chr15:69689866 nonsynonymous SNV 0.602 4 22 hPsi_associated_SNPs_6793 0 0 1 0 1 Cytosol 0.439846898472536 0.442309102943384 0.51163 0 hPsi_site_12210 iPseU_CNN:0.51163;iRNA_PseU:0 12211 chr19 9491942 9491942 1 + A G LIHC 9491941 + 9491921 9491961 41 CTCATACTGGAGAGAAGCCTTATGAGTGTGATCACTGTGGA CTCATACTGGAGAGAAGCCTTGTGAGTGTGATCACTGTGGA < 41bp 0.807609610614689 0.404900461942935 0.5170714 0.29988027 prediction 0.615219221229379 Functional Loss - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9491941 chr19:9491942 nonsynonymous SNV 0.095 3 22 hPsi_associated_SNPs_6794 0 0 1 0 0 unknown 0.439110876820957 0.43904373627707 0.0341427999999999 0 hPsi_site_12211 iPseU_CNN:0.0341427999999999;iRNA_PseU:0 12212 chr11 103908661 103908661 1 + A G LUSC 103908660 + 103908640 103908680 41 GGAGAGTTGCCCTTATGCTCTAGGATGGTAAGTGGGCAAGA GGAGAGTTGCCCTTATGCTCTGGGATGGTAAGTGGGCAAGA < 41bp 0.807590236956886 0.396893605455836 0.242885 0.18739104 prediction 0.615180473913773 Functional Loss - DDI1 ENSG00000170967 CDS Human protein_coding chr11:103908660 chr11:103908661 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_6795 0 0 0 0 0 exosome 0.43875019225781 0.438718668829797 0 0 hPsi_site_12212 iPseU_CNN:0;iRNA_PseU:0 12213 chr4 9784399 9784399 1 + A G UCEC 9784398 + 9784378 9784418 41 TCGTGACCTACACGCGCATCTACCGCATCGCCCAGGTGCAG TCGTGACCTACACGCGCATCTGCCGCATCGCCCAGGTGCAG < 41bp 0.807584345464954 0.390404377419437 0.3942988 0.21616936 prediction 0.615168690929909 Functional Loss - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784398 chr4:9784399 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6796 0 0 0 0 0 unknown 0.438716275809389 0.438718693552642 0 0 hPsi_site_12213 iPseU_CNN:0;iRNA_PseU:0 12214 chr14 20665821 20665821 1 + A G LUSC 20665820 + 20665800 20665840 41 CAACTTCTCCTTCTTGGAGATATGTTATGTCACCTCCACAG CAACTTCTCCTTCTTGGAGATGTGTTATGTCACCTCCACAG < 41bp 0.90172804982516 0.594158279773448 0.3899826 0.33174184 prediction 0.615139540103425 Functional Loss - OR11G2 ENSG00000196832 CDS Human protein_coding chr14:20665820 chr14:20665821 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6797 0 0 0 0 0 unknown 0.438611964857339 0.438539367803313 0 0 hPsi_site_12214 iPseU_CNN:0;iRNA_PseU:0 12215 chr8 86163053 86163053 1 + A G STAD 86163052 + 86163032 86163072 41 TTAAAACCAAAGAAGTGAAATATGACTCTTCCCTCCGACCA TTAAAACCAAAGAAGTGAAATGTGACTCTTCCCTCCGACCA < 41bp 0.807552251016788 0.390302620592745 0.4704305 0.38676426 prediction 0.615104502033575 Functional Loss - CA13 ENSG00000185015 CDS Human protein_coding chr8:86163052 chr8:86163053 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_6798 0 0 1 0 1 Cytosol 0.438718599721447 0.438718453000633 0 0 hPsi_site_12215 iPseU_CNN:0;iRNA_PseU:0 12216 chr14 24529890 24529890 1 + A C rs1951635 24529889 + 24529869 24529909 41 GGAGGTGCGGGCCCTGAGACTATGCCCCCTGGAGCCTGTGC GGAGGTGCGGGCCCTGAGACTCTGCCCCCTGGAGCCTGTGC < 41bp 0.887101653692953 0.579559126858917 0.30554327 0.1881024 prediction 0.615085053668073 Functional Loss - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24529889 chr14:24529890 synonymous SNV . 0 22 hPsi_associated_SNPs_6799 0 0 0 0 2 Endoplasmic reticulum 0.438718528836275 0.439130676544302 0 0 hPsi_site_12216 iPseU_CNN:0;iRNA_PseU:0 12217 chr17 3101305 3101305 1 + A G BLCA 3101304 + 3101284 3101324 41 CCCCACACTCTGCTCACAGCTAGTTTGTCCTTCTGTGGCAA CCCCACACTCTGCTCACAGCTGGTTTGTCCTTCTGTGGCAA < 41bp 0.807526674004279 0.406330866462473 0.18150827 0.123120606 prediction 0.615053348008557 Functional Loss - OR1A2 ENSG00000172150 CDS Human protein_coding chr17:3101304 chr17:3101305 nonsynonymous SNV 0.286 1 22 hPsi_associated_SNPs_6800 0 0 0 0 0 exosome 0.438733283899406 0.438697777878795 0 0 hPsi_site_12217 iPseU_CNN:0;iRNA_PseU:0 12218 chr17 39978552 39978552 1 + A G ESCA 39978551 + 39978531 39978571 41 GCAGGACCCTGAGAAAACCATAGGAGACATGTTCCAGAACC GCAGGACCCTGAGAAAACCATGGGAGACATGTTCCAGAACC < 41bp 0.80751030102459 0.399062946505954 0.60969484 0.30151677 prediction 0.61502060204918 Functional Loss - FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39978551 chr17:39978552 nonsynonymous SNV 0.942 4 22 hPsi_associated_SNPs_6801 0 0 1 0 1 Nucleus 0.438718560955076 0.438694635145681 0.21938968 0 hPsi_site_12218 iPseU_CNN:0.21938968;iRNA_PseU:0 12219 chr14 103969909 103969909 1 + A G rs13987 103969908 + 103969888 103969928 41 CTACACTGGCAGCCAGTCATTACTAGTACCTCTGCGGGAGA CTACACTGGCAGCCAGTCATTGCTAGTACCTCTGCGGGAGA < 41bp 0.88197887504286 0.574483003708235 0.49446517 0.27268407 prediction 0.614991742669249 Functional Loss - MARK3 ENSG00000075413 UTR3 Human protein_coding chr14:103969908 chr14:103969909 . . 0 22 hPsi_associated_SNPs_6802 0 0 1 2 0 Cytosol 0.438716792080882 0.438748038688355 0 0 hPsi_site_12219 iPseU_CNN:0;iRNA_PseU:0 12220 chr3 33870378 33870378 1 + A G ESCA 33870377 + 33870357 33870397 41 GTCTTGGCTGCAAAGCACTGTATCATGCAGGCCAATGCTGA GTCTTGGCTGCAAAGCACTGTGTCATGCAGGCCAATGCTGA < 41bp 0.807487178206091 0.382584645645445 0.8424665 0.57359457 prediction 0.614974356412182 Functional Loss - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33870377 chr3:33870378 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6803 0 0 1 0 3 Nucleus 0.438963815938902 0.439194593417931 0.53774386 0 hPsi_site_12220 iPseU_CNN:0.53774386;iRNA_PseU:0 12221 chr1 230398715 230398715 1 + T G SKCM 230398714 + 230398694 230398734 41 AGAAACTCAGCTGCAAGCCTTTCAAATGGTACCTTGAAAAT AGAAACTCAGCTGCAAGCCTTGCAAATGGTACCTTGAAAAT < 41bp 0.807463896185675 0.457703840859529 0.68651104 0.5407266 prediction 0.61492779237135 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230398714 chr1:230398715 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_6804 0 0 1 1 2 Endoplasmic reticulum 0.438718661409794 0.438718640082868 0.29156888 0 hPsi_site_12221 iPseU_CNN:0.29156888;iRNA_PseU:0 12222 chr1 161199541 161199541 1 + T C STAD 161199542 - 161199522 161199562 41 CTCACCTGGAACACCCTGGATACACTGGAGTGGGAAAATGC CTCACCTGGAACACCCTGGATGCACTGGAGTGGGAAAATGC < 41bp 0.860998140498018 0.553541888113553 0.58529276 0.23838112 prediction 0.614912504768929 Functional Loss - NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199542 chr1:161199541 nonsynonymous SNV 0.047 2 22 hPsi_associated_SNPs_6805 0 0 0 2 1 membrane 0.438721029023688 0.438641059241093 0.17058552 0 hPsi_site_12222 iPseU_CNN:0.17058552;iRNA_PseU:0 12223 chr15 45250685 45250685 1 + T G rs147135555 45250684 + 45250664 45250704 41 GGTGGCTTTGGGTCATTTCATTCTTCCTCCTGCGTGCCTGC GGTGGCTTTGGGTCATTTCATGCTTCCTCCTGCGTGCCTGC < 41bp 0.823645925687791 0.516191714396654 0.44488508 0.31500405 prediction 0.614908422582276 Functional Loss - TERB2 ENSG00000167014 CDS Human protein_coding chr15:45250684 chr15:45250685 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6806 0 0 0 0 1 unknown 0.438713194832787 0.438719297965552 0 0 hPsi_site_12223 iPseU_CNN:0;iRNA_PseU:0 12224 chr14 70237225 70237225 1 + T G UCEC 70237224 + 70237204 70237244 41 ACAAGCTGGGGAAGTAACGTTTGCGGATGCACACCGACCTA ACAAGCTGGGGAAGTAACGTTGGCGGATGCACACCGACCTA < 41bp 0.858237012290229 0.550840376575468 0.6748113 0.32258803 prediction 0.61479327142952 Functional Loss - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70237224 chr14:70237225 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6807 0 0 1 0 1 Nucleus 0.438718633865551 0.438718593032527 0.3496226 0 hPsi_site_12224 iPseU_CNN:0.3496226;iRNA_PseU:0 12225 chr11 76508314 76508314 1 + A G rs79998295 76508313 + 76508293 76508333 41 GAGAAGGAAAAAGGCTAATCTAAGTTCCTGCGGGCAGTGGC GAGAAGGAAAAAGGCTAATCTGAGTTCCTGCGGGCAGTGGC < 41bp 0.890432371711847 0.583043417044638 0.3121115 0.2490035 prediction 0.614777909334418 Functional Loss - TSKU ENSG00000182704 UTR3 Human protein_coding chr11:76508313 chr11:76508314 . . 0 22 hPsi_associated_SNPs_6808 0 0 1 1 0 Endoplasmic reticulum 0.438718432455625 0.438718573871214 0 0 hPsi_site_12225 iPseU_CNN:0;iRNA_PseU:0 12226 chr11 6898750 6898750 1 + A G STAD 6898749 + 6898729 6898769 41 CCATGTTGAACCCCATCATCTACAGCTCAAGGAATAAAGAA CCATGTTGAACCCCATCATCTGCAGCTCAAGGAATAAAGAA < 41bp 0.807371271667071 0.406698319873868 0.49269772 0.3302567 prediction 0.614742543334142 Functional Loss - OR10A4 ENSG00000170782 CDS Human protein_coding chr11:6898749 chr11:6898750 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6809 0 0 0 0 0 exosome 0.438718501318821 0.438718610755607 0 0 hPsi_site_12226 iPseU_CNN:0;iRNA_PseU:0 12227 chr4 90874191 90874191 1 + T G GBM 90874190 + 90874170 90874210 41 ATATGCACCCATGGTGGCATTTTTTGCATCTCATACGTATG ATATGCACCCATGGTGGCATTGTTTGCATCTCATACGTATG < 41bp 0.807364908690049 0.481531154670494 0.39314255 0.2767228 prediction 0.614729817380099 Functional Loss - MMRN1 ENSG00000138722 CDS Human protein_coding chr4:90874190 chr4:90874191 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_6810 0 0 0 0 1 cytosol 0.438703472480557 0.438745220859679 0 0 hPsi_site_12227 iPseU_CNN:0;iRNA_PseU:0 12228 chr1 94000299 94000299 1 + T G COAD 94000298 + 94000278 94000318 41 TAGACTCCTTCAAATCTGGTTTTGAACCTCCAGGAGACTTT TAGACTCCTTCAAATCTGGTTGTGAACCTCCAGGAGACTTT < 41bp 0.831896799738351 0.524548940682202 0.6564124 0.29804933 prediction 0.614695718112297 Functional Loss - FNBP1L ENSG00000137942 CDS Human protein_coding chr1:94000298 chr1:94000299 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6811 0 0 1 0 1 Nucleus 0.438719568778805 0.43872631013845 0.3128248 0 hPsi_site_12228 iPseU_CNN:0.3128248;iRNA_PseU:0 12229 chr8 54866719 54866719 1 + T C COAD 54866718 + 54866698 54866738 41 CTCCAGCAGGAAGGAATGCATTCCGTGAATTCCTCCGAACA CTCCAGCAGGAAGGAATGCATCCCGTGAATTCCTCCGAACA < 41bp 0.81202024575101 0.504673575428567 0.6905094 0.351684 prediction 0.614693340644884 Functional Loss - RGS20 ENSG00000147509 CDS Human protein_coding chr8:54866718 chr8:54866719 nonsynonymous SNV 0.979 4 22 hPsi_associated_SNPs_6812 0 0 0 0 1 chromatin 0.438718592995088 0.438718592995102 0.3810188 0 hPsi_site_12229 iPseU_CNN:0.3810188;iRNA_PseU:0 12230 chr22 21330039 21330039 1 + A G LUSC 21330038 + 21330018 21330058 41 CCAAGGAGTTTTTCCGAGCCTATGGCATCGAGGTGCTCACC CCAAGGAGTTTTTCCGAGCCTGTGGCATCGAGGTGCTCACC < 41bp 0.807337157402924 0.378902231548891 0.4426897 0.33509976 prediction 0.614674314805849 Functional Loss - AIFM3 ENSG00000183773 CDS Human protein_coding chr22:21330038 chr22:21330039 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6813 0 0 0 0 2 exosome 0.438718593000493 0.438718593005501 0 0 hPsi_site_12230 iPseU_CNN:0;iRNA_PseU:0 12231 chr3 137729266 137729266 1 + T G UCEC 137729265 + 137729245 137729285 41 TTCACCGAATGCAGGCCCTATTTCACCATCCTGGGACTTCC TTCACCGAATGCAGGCCCTATGTCACCATCCTGGGACTTCC < 41bp 0.807335746154275 0.488438012610224 0.32173622 0.22691765 prediction 0.614671492308549 Functional Loss - CLDN18 ENSG00000066405 CDS Human protein_coding chr3:137729265 chr3:137729266 nonsynonymous SNV 0.738 1 22 hPsi_associated_SNPs_6814 0 0 0 0 1 Endoplasmic reticulum 0.43895555259129 0.438534841124849 0 0 hPsi_site_12231 iPseU_CNN:0;iRNA_PseU:0 12232 chr20 20269349 20269349 1 + A G LUAD 20269348 + 20269328 20269368 41 GACAGTCGACTTGTGATTGATACCAACTTCCACACCAACGA GACAGTCGACTTGTGATTGATGCCAACTTCCACACCAACGA < 41bp 0.807315059175247 0.39273711998557 0.6571298 0.30841964 prediction 0.614630118350493 Functional Loss - CFAP61 ENSG00000089101 CDS Human protein_coding chr20:20269348 chr20:20269349 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_6815 0 0 0 0 1 nucleus 0.483000147509359 0.46032702683342 0.3142596 0 hPsi_site_12232 iPseU_CNN:0.3142596;iRNA_PseU:0 12233 chr5 140481227 140481227 1 + A G COAD 140481226 + 140481206 140481246 41 GGAGGCCTATCCGGAAAGTCTACAGTCATAGTCCAGGTGGT GGAGGCCTATCCGGAAAGTCTGCAGTCATAGTCCAGGTGGT < 41bp 0.902882226265855 0.595627554656501 0.3560101 0.29394424 prediction 0.614509343218707 Functional Loss - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481226 chr5:140481227 nonsynonymous SNV 0.932 0 22 hPsi_associated_SNPs_6816 0 0 0 0 0 exosome 0.438718601051214 0.438719418934744 0 0 hPsi_site_12233 iPseU_CNN:0;iRNA_PseU:0 12234 chr2 47607055 47607055 1 + A G STAD 47607054 + 47607034 47607074 41 CAGGGTCTAAAAGCTGGTGTTATTGCTGTTATTGTGGTTGT CAGGGTCTAAAAGCTGGTGTTGTTGCTGTTATTGTGGTTGT < 41bp 0.906330253811057 0.599082658702152 0.25362208 0.2027928 prediction 0.61449519021781 Functional Loss - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47607054 chr2:47607055 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_6817 0 0 1 0 1 Endoplasmic reticulum 0.438719809516797 0.438694626024845 0 0 hPsi_site_12234 iPseU_CNN:0;iRNA_PseU:0 12235 chr6 55120086 55120086 1 + T G BLCA 55120085 + 55120065 55120105 41 TGTCTCCTGCATTATAATGATTCCTCAGGCCATCGTCATGG TGTCTCCTGCATTATAATGATGCCTCAGGCCATCGTCATGG < 41bp 0.807231257061032 0.479641815247481 0.26795724 0.23280391 prediction 0.614462514122065 Functional Loss - HCRTR2 ENSG00000137252 CDS Human protein_coding chr6:55120085 chr6:55120086 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_6818 0 0 0 0 1 unknown 0.438718593745086 0.438718579470078 0 0 hPsi_site_12235 iPseU_CNN:0;iRNA_PseU:0 12236 chr1 54423862 54423862 1 + T G COAD 54423861 + 54423841 54423881 41 AAGCTTGAGGAGATTAAGTCTTTCCGGGAGCTGACCTGCCT AAGCTTGAGGAGATTAAGTCTGTCCGGGAGCTGACCTGCCT < 41bp 0.807216617173094 0.453044787781873 0.44588965 0.31018385 prediction 0.614433234346189 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54423861 chr1:54423862 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6819 0 0 1 0 2 Ribosome 0.438718594825317 0.43871859279911 0 0 hPsi_site_12236 iPseU_CNN:0;iRNA_PseU:0 12237 chr17 38032969 38032969 1 + T G rs34986808 38032968 + 38032948 38032988 41 TGCGACTTTTAGTCCTGATGTTAATGTAACTTGTCAGACCT TGCGACTTTTAGTCCTGATGTGAATGTAACTTGTCAGACCT < 41bp 0.815632830986663 0.508421270063738 0.21387985 0.19544488 prediction 0.61442312184585 Functional Loss - ZPBP2 ENSG00000186075 CDS Human protein_coding chr17:38032968 chr17:38032969 synonymous SNV . 0 22 hPsi_associated_SNPs_6820 0 0 0 0 1 exosome 0.438667694560538 0.43871249890893 0 0 hPsi_site_12237 iPseU_CNN:0;iRNA_PseU:0 12238 chr12 4461585 4461585 1 + A G BLCA 4461584 + 4461564 4461604 41 AAAAATCACAGCTCTAAAGTTAATTCAGACAGCGGTATTCC AAAAATCACAGCTCTAAAGTTGATTCAGACAGCGGTATTCC < 41bp 0.807197876568386 0.399733392999685 0.7357991 0.49643576 prediction 0.614395753136773 Functional Loss - TIGAR ENSG00000078237 CDS Human protein_coding chr12:4461584 chr12:4461585 nonsynonymous SNV 0.028 1 22 hPsi_associated_SNPs_6821 0 0 1 0 0 Nucleus 0.439017561474362 0.438718952743348 0.4715982 0 hPsi_site_12238 iPseU_CNN:0.4715982;iRNA_PseU:0 12239 chr3 41266124 41266124 1 + A G ACC 41266123 + 41266103 41266143 41 GGAATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAG GGAATCCATTCTGGTGCCACTGCCACAGCTCCTTCTCTGAG < 41bp 0.807191791895923 0.385230758434185 0.36976826 0.23616642 prediction 0.614383583791846 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266123 chr3:41266124 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6822 11 0 1 0 0 Nucleus 0.43871857571015 0.438718592626524 0 0 hPsi_site_12239 iPseU_CNN:0;iRNA_PseU:0 12240 chr3 8543661 8543661 1 + A G STAD 8543660 + 8543640 8543680 41 AAGGACCTCAACCCAGGAGTTAAAAAGGTGAGTGGAAAGCT AAGGACCTCAACCCAGGAGTTGAAAAGGTGAGTGGAAAGCT < 41bp 0.807186235119208 0.398399891726903 0.501048 0.3221256 prediction 0.614372470238415 Functional Loss - LMCD1 ENSG00000071282 CDS Human protein_coding chr3:8543660 chr3:8543661 nonsynonymous SNV 0.814 0 22 hPsi_associated_SNPs_6823 0 0 0 0 1 exosome 0.438718592994783 0.438718127084245 0.0020960000000001 0 hPsi_site_12240 iPseU_CNN:0.0020960000000001;iRNA_PseU:0 12241 chr14 20711447 20711447 1 + A G STAD 20711446 + 20711426 20711466 41 GGCTTATTGGATTCCTTGGATACCCAATTCCCATTTTCTAC GGCTTATTGGATTCCTTGGATGCCCAATTCCCATTTTCTAC < 41bp 0.807181776427612 0.40911626142587 0.5199078 0.2902616 prediction 0.614363552855223 Functional Loss - OR11H4 ENSG00000176198 CDS Human protein_coding chr14:20711446 chr14:20711447 nonsynonymous SNV 0.918 2 22 hPsi_associated_SNPs_6824 0 0 0 0 0 unknown 0.438718592985888 0.43871859370619 0.0398156000000001 0 hPsi_site_12241 iPseU_CNN:0.0398156000000001;iRNA_PseU:0 12242 chr10 94369210 94369210 1 + A C UCS 94369209 + 94369189 94369229 41 GGATGAAGTCTATCAAATTTTAGAAAAGGGGGCAGCAAAAA GGATGAAGTCTATCAAATTTTCGAAAAGGGGGCAGCAAAAA < 41bp 0.807181217906396 0.443218385688174 0.35453278 0.30928627 prediction 0.614362435812791 Functional Loss - KIF11 ENSG00000138160 CDS Human protein_coding chr10:94369209 chr10:94369210 nonsynonymous SNV 0.854 4 22 hPsi_associated_SNPs_6825 0 0 1 0 2 Cytosol 0.438718619715777 0.438718592976711 0 0 hPsi_site_12242 iPseU_CNN:0;iRNA_PseU:0 12243 chr9 130486410 130486410 1 + A G STAD 130486409 + 130486389 130486429 41 CCCCCGACAGGGGCACCATGTACCGACGGCTCCAGGAGTTC CCCCCGACAGGGGCACCATGTGCCGACGGCTCCAGGAGTTC < 41bp 0.80717227992137 0.368311272602846 0.64266634 0.23923692 prediction 0.61434455984274 Functional Loss - TTC16 ENSG00000167094 CDS Human protein_coding chr9:130486409 chr9:130486410 nonsynonymous SNV 0.037 3 22 hPsi_associated_SNPs_6826 0 0 0 0 1 exosome 0.438718555511498 0.43871861236018 0.28533268 0 hPsi_site_12243 iPseU_CNN:0.28533268;iRNA_PseU:0 12244 chr1 179320554 179320554 1 + A G LUSC 179320553 + 179320533 179320573 41 ATGGAGTCTTACTCTGCTTTTATTCTCAAGAATGGTATGCA ATGGAGTCTTACTCTGCTTTTGTTCTCAAGAATGGTATGCA < 41bp 0.807166198333495 0.384826432189609 0.22253758 0.22377756 prediction 0.61433239666699 Functional Loss - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179320553 chr1:179320554 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6827 0 0 1 0 1 Ribosome 0.438718581889883 0.438719954164812 0 0 hPsi_site_12244 iPseU_CNN:0;iRNA_PseU:0 12245 chr11 5905551 5905551 1 + A C SKCM 5905550 + 5905530 5905570 41 CTATCAATGACACCCACTTCTATCCCCCCTTCTTCCTCCTG CTATCAATGACACCCACTTCTCTCCCCCCTTCTTCCTCCTG < 41bp 0.807163837661199 0.465982597917149 0.67711043 0.3894744 prediction 0.614327675322397 Functional Loss - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5905550 chr11:5905551 nonsynonymous SNV 0.023 1 22 hPsi_associated_SNPs_6828 0 0 0 0 0 unknown 0.438718509240361 0.438718592951772 0.35422086 0 hPsi_site_12245 iPseU_CNN:0.35422086;iRNA_PseU:0 12246 chr1 234444895 234444895 1 + T G UCEC 234444894 + 234444874 234444914 41 TGGCTTGACTTTGAAGGTGTTTTTTACCAAGGCAGCACCCT TGGCTTGACTTTGAAGGTGTTGTTTACCAAGGCAGCACCCT < 41bp 0.807126149062377 0.476468777127555 0.37321907 0.29882932 prediction 0.614252298124755 Functional Loss - SLC35F3 ENSG00000183780 CDS Human protein_coding chr1:234444894 chr1:234444895 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6829 0 0 0 0 1 nucleoplasm 0.438715991038168 0.438745050464079 0 0 hPsi_site_12246 iPseU_CNN:0;iRNA_PseU:0 12247 chr15 44087253 44087253 1 + A C STAD 44087254 - 44087234 44087274 41 AGAAACCCCAGCCCCTTATCTTGAGGCGCCGCCGCCACCGC AGAAACCCCAGCCCCTTATCTGGAGGCGCCGCCGCCACCGC < 41bp 0.833485019825835 0.526360426444688 0.3799601 0.302733 prediction 0.614249186762292 Functional Loss - SERINC4 ENSG00000184716 CDS Human protein_coding chr15:44087254 chr15:44087253 stoploss 0.014 1 22 hPsi_associated_SNPs_6830 0 0 0 0 0 chromatin 0.438718592994927 0.438718592995101 0 0 hPsi_site_12247 iPseU_CNN:0;iRNA_PseU:0 12248 chr12 111748322 111748322 1 + A G COAD 111748321 + 111748301 111748341 41 GGCAGCGGGTGTTTGGGCATTACGTGCTGGGGCTGTCGCAG GGCAGCGGGTGTTTGGGCATTGCGTGCTGGGGCTGTCGCAG < 41bp 0.807122726976224 0.38638991578824 0.44859517 0.24662009 prediction 0.614245453952449 Functional Loss - CUX2 ENSG00000111249 CDS Human protein_coding chr12:111748321 chr12:111748322 nonsynonymous SNV 0.941 4 22 hPsi_associated_SNPs_6831 0 0 0 0 0 exosome 0.438458311494391 0.43865452567086 0 0 hPsi_site_12248 iPseU_CNN:0;iRNA_PseU:0 12249 chr10 26998637 26998637 1 + T G rs77826284 26998636 + 26998616 26998656 41 TTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCG TTGATGGGAAAGGGAAAGCCTGTCGACCAATTATTGTGGCG < 41bp 0.807121999984229 0.45860050404094 0.8536737 0.45588124 prediction 0.614243999968458 Functional Loss - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26998636 chr10:26998637 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6832 2 0 1 0 2 Ribosome 0.438718684803826 0.438718591504778 0.7073474 0 hPsi_site_12249 iPseU_CNN:0.7073474;iRNA_PseU:0 12250 chr5 154190842 154190842 1 + A G LGG 154190841 + 154190821 154190861 41 GCCTTTTTCGATACTACAGTTATGGCCTGGAAAAGAAGTTC GCCTTTTTCGATACTACAGTTGTGGCCTGGAAAAGAAGTTC < 41bp 0.807121855113629 0.375477886134122 0.24466842 0.20455605 prediction 0.614243710227257 Functional Loss - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154190841 chr5:154190842 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6833 0 0 1 0 2 Cytosol 0.438719516054069 0.438719251738863 0 0 hPsi_site_12250 iPseU_CNN:0;iRNA_PseU:0 12251 chr16 31498892 31498892 1 + T C UCEC 31498893 - 31498873 31498913 41 GCGAAGTCGCTGCTCCCAGGTATTTGTCGAAGAGACCCGAA GCGAAGTCGCTGCTCCCAGGTGTTTGTCGAAGAGACCCGAA < 41bp 0.9036480807203 0.596543321118848 0.8715559 0.51049054 prediction 0.614209519202904 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31498893 chr16:31498892 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6834 0 0 0 0 0 exosome 0.43871860428639 0.438718592764269 0.72213072 0 hPsi_site_12251 iPseU_CNN:0.72213072;iRNA_PseU:0 12252 chr2 103431276 103431276 1 + A G BLCA 103431275 + 103431255 103431295 41 CAGTGGCTGACATGGAAAGCTACCGAAACATGAAAATGAAG CAGTGGCTGACATGGAAAGCTGCCGAAACATGAAAATGAAG < 41bp 0.807102481515277 0.40180226116004 0.6146722 0.2197521 prediction 0.614204963030553 Functional Loss - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103431275 chr2:103431276 nonsynonymous SNV 0.938 4 22 hPsi_associated_SNPs_6835 0 0 0 1 1 cytosol 0.438851762614731 0.438748942626114 0.2293444 0 hPsi_site_12252 iPseU_CNN:0.2293444;iRNA_PseU:0 12253 chr8 72964896 72964896 1 + A C STAD 72964897 - 72964877 72964917 41 GAACAAGCAGCAGGCCTCCTTTTTGCACCTTGCACTTCACA GAACAAGCAGCAGGCCTCCTTGTTGCACCTTGCACTTCACA < 41bp 0.855675682767267 0.548575455722503 0.63039136 0.53092414 prediction 0.614200454089529 Functional Loss - TRPA1 ENSG00000104321 CDS Human protein_coding chr8:72964897 chr8:72964896 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_6836 0 0 0 0 1 chromatin 0.438719413487352 0.438718027695314 0.19893444 0 hPsi_site_12253 iPseU_CNN:0.19893444;iRNA_PseU:0 12254 chr2 63834012 63834012 1 + T G UCEC 63834011 + 63833991 63834031 41 AACAGAATAAGACCTGGAAGTTTGTTGAAGGTCTCCCTATT AACAGAATAAGACCTGGAAGTGTGTTGAAGGTCTCCCTATT < 41bp 0.836608866659525 0.529531982014429 0.21986467 0.19397363 prediction 0.614153769290191 Functional Loss - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834011 chr2:63834012 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6837 0 0 1 0 1 Cytosol 0.438718592995077 0.438718598455404 0 0 hPsi_site_12254 iPseU_CNN:0;iRNA_PseU:0 12255 chr13 25672188 25672188 1 + A G HNSC 25672187 + 25672167 25672207 41 GCCCACCAAGCTAAAGAGGCTACCCAGAAAGCAGTTAACAG GCCCACCAAGCTAAAGAGGCTGCCCAGAAAGCAGTTAACAG < 41bp 0.807071564510161 0.404477385599349 0.41982794 0.2502154 prediction 0.614143129020321 Functional Loss - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25672187 chr13:25672188 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6838 0 0 0 0 0 Cytosol 0.438718648958267 0.438725035697715 0 0 hPsi_site_12255 iPseU_CNN:0;iRNA_PseU:0 12256 chr1 40929164 40929164 1 + A G ESCA 40929163 + 40929143 40929183 41 TTCATACTGGAGAAAAACCTTATGATTGTAATGAGTGTGGA TTCATACTGGAGAAAAACCTTGTGATTGTAATGAGTGTGGA < 41bp 0.807060584985128 0.411707436422312 0.20327878 0.1843547 prediction 0.614121169970255 Functional Loss - ZFP69B ENSG00000187801 CDS Human protein_coding chr1:40929163 chr1:40929164 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_6839 0 0 1 0 0 Nucleus 0.438716341465591 0.438720199415378 0 0 hPsi_site_12256 iPseU_CNN:0;iRNA_PseU:0 12257 chr1 201984390 201984390 1 + A G BLCA 201984389 + 201984369 201984409 41 TGGATGGCCGGCGACTCGTCTACAAGTTTGGCAAAAACTCA TGGATGGCCGGCGACTCGTCTGCAAGTTTGGCAAAAACTCA < 41bp 0.807033037489007 0.396392151995398 0.36224583 0.28364733 prediction 0.614066074978015 Functional Loss - ELF3 ENSG00000163435 CDS Human protein_coding chr1:201984389 chr1:201984390 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6840 0 0 1 0 1 Endoplasmic reticulum 0.438715634190703 0.438718752276465 0 0 hPsi_site_12257 iPseU_CNN:0;iRNA_PseU:0 12258 chr16 67861918 67861918 1 + A G rs73593803 67861917 + 67861897 67861937 41 GAACTTGTGGGCAGCCTGCGTACTCCAGTCCTGCTAACCCC GAACTTGTGGGCAGCCTGCGTGCTCCAGTCCTGCTAACCCC < 41bp 0.807001270633612 0.434292354314057 0.69909644 0.31975645 prediction 0.614002541267225 Functional Loss - TSNAXIP1 ENSG00000102904 UTR3 Human protein_coding chr16:67861917 chr16:67861918 . . 0 22 hPsi_associated_SNPs_6841 0 0 1 0 0 exosome 0.438760596482131 0.438740022054086 0.39819288 0 hPsi_site_12258 iPseU_CNN:0.39819288;iRNA_PseU:0 12259 chr2 241402858 241402858 1 + A G UCEC 241402857 + 241402837 241402877 41 GCGCCAGGCCCTGCCCTGACTATTGCCGAAATGTGCTCAAG GCGCCAGGCCCTGCCCTGACTGTTGCCGAAATGTGCTCAAG < 41bp 0.806992749648484 0.379615365663011 0.7990426 0.3989282 prediction 0.613985499296967 Functional Loss - GPC1 ENSG00000063660 CDS Human protein_coding chr2:241402857 chr2:241402858 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_6842 0 0 1 0 2 Cytosol 0.438714930041073 0.438713965585363 0.5980852 0 hPsi_site_12259 iPseU_CNN:0.5980852;iRNA_PseU:0 12260 chr4 184587429 184587429 1 + A G UCEC 184587428 + 184587408 184587448 41 AGAGAACTTCATATGAGTGGTACATTCCTAAAGGGATCTTA AGAGAACTTCATATGAGTGGTGCATTCCTAAAGGGATCTTA < 41bp 0.806992067394281 0.401889841578371 0.54081774 0.32650292 prediction 0.613984134788562 Functional Loss - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184587428 chr4:184587429 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6843 0 0 0 0 1 Cytosol 0.438718583313865 0.438718149426631 0.0816354800000001 0 hPsi_site_12260 iPseU_CNN:0.0816354800000001;iRNA_PseU:0 12261 chr19 58928811 58928811 1 + A G COAD 58928810 + 58928790 58928830 41 AATGTGGGAAGTTCTTTAAATACAATAATAGCTTCATTCTT AATGTGGGAAGTTCTTTAAATGCAATAATAGCTTCATTCTT < 41bp 0.898355130767733 0.591365593657929 0.25179416 0.28011107 prediction 0.613979074219607 Functional Loss - ZNF584 ENSG00000171574 CDS Human protein_coding chr19:58928810 chr19:58928811 nonsynonymous SNV 0.776 2 22 hPsi_associated_SNPs_6844 0 0 1 0 0 membrane 0.438718609027128 0.438718125285066 0 0 hPsi_site_12261 iPseU_CNN:0;iRNA_PseU:0 12262 chr2 113306901 113306901 1 + A G STAD 113306900 + 113306880 113306920 41 AAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCC AAAGTCATCCGAATGTTGATTGTGCCTCGGAGAAATTTTCC < 41bp 0.806980786449146 0.391023152676108 0.21432123 0.13317585 prediction 0.613961572898293 Functional Loss - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113306900 chr2:113306901 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6845 0 0 1 0 2 Nucleus 0.435759267743504 0.438726932841697 0 0 hPsi_site_12262 iPseU_CNN:0;iRNA_PseU:0 12263 chr13 42784817 42784817 1 + A G UCEC 42784816 + 42784796 42784836 41 CAGTTCTCCGAACCCATTTGTACATCCATCACGCCATTGAC CAGTTCTCCGAACCCATTTGTGCATCCATCACGCCATTGAC < 41bp 0.806962785059368 0.38086004283579 0.5923882 0.24304923 prediction 0.613925570118736 Functional Loss - DGKH ENSG00000102780 CDS Human protein_coding chr13:42784816 chr13:42784817 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_6846 0 0 1 0 2 chromatin 0.43591702864081 0.438404569443406 0.1847764 0 hPsi_site_12263 iPseU_CNN:0.1847764;iRNA_PseU:0 12264 chr1 156351231 156351231 1 + A G LIHC 156351230 + 156351210 156351250 41 GGACGGCCCTCAACACATACTACTCCCTGGCTGCCAGCACC GGACGGCCCTCAACACATACTGCTCCCTGGCTGCCAGCACC < 41bp 0.806962515194019 0.364648589184961 0.39264894 0.19728118 prediction 0.613925030388038 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156351230 chr1:156351231 nonsynonymous SNV 0.955 3 22 hPsi_associated_SNPs_6847 0 0 0 0 2 Cytosol 0.438490218473495 0.436407001852536 0 0 hPsi_site_12264 iPseU_CNN:0;iRNA_PseU:0 12265 chr9 125797228 125797228 1 + A G UCEC 125797227 + 125797207 125797247 41 CCTGTATCAGCATTGATAGATACATTGCCATTACTAAACCT CCTGTATCAGCATTGATAGATGCATTGCCATTACTAAACCT < 41bp 0.806946099567094 0.398399379400341 0.49865878 0.3390906 prediction 0.613892199134187 Functional Loss - GPR21 ENSG00000188394 CDS Human protein_coding chr9:125797227 chr9:125797228 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6848 0 0 0 1 0 exosome 0.438719594201606 0.438727231975702 0 0 hPsi_site_12265 iPseU_CNN:0;iRNA_PseU:0 12266 chr22 29837932 29837932 1 + T G COAD 29837931 + 29837911 29837951 41 GGCATGCAGAACGTTTCCTTTTTTGATGCTGAAGGTGGTTC GGCATGCAGAACGTTTCCTTTGTTGATGCTGAAGGTGGTTC < 41bp 0.82131128331353 0.514373648418895 0.5555607 0.65971756 prediction 0.613875269789272 Functional Loss - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837931 chr22:29837932 nonsynonymous SNV 0.143 1 22 hPsi_associated_SNPs_6849 0 0 0 0 0 exosome 0.438718592604067 0.43871780555514 0 0 hPsi_site_12266 iPseU_CNN:0;iRNA_PseU:0 12267 chr1 161641380 161641380 1 + A G UCEC 161641379 + 161641359 161641399 41 ACAACAATGACAGCGGGGAGTACACGTGCCAGACTGGCCAG ACAACAATGACAGCGGGGAGTGCACGTGCCAGACTGGCCAG < 41bp 0.806917546163813 0.378777589999246 0.3175893 0.19098115 prediction 0.613835092327626 Functional Loss - FCGR2B ENSG00000072694 CDS Human protein_coding chr1:161641379 chr1:161641380 nonsynonymous SNV 0.132 4 22 hPsi_associated_SNPs_6850 0 0 0 0 1 Endoplasmic reticulum 0.438719120364451 0.439198938246886 0 0 hPsi_site_12267 iPseU_CNN:0;iRNA_PseU:0 12268 chr6 155109132 155109132 1 + A G rs149559791 155109131 + 155109111 155109151 41 CATTAGCACTTTCCAGAATTTATATCGTTGCCCTGGGGATG CATTAGCACTTTCCAGAATTTGTATCGTTGCCCTGGGGATG < 41bp 0.806875015960551 0.38637839904932 0.72199476 0.22137913 prediction 0.613750031921102 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155109131 chr6:155109132 synonymous SNV . 0 22 hPsi_associated_SNPs_6851 0 0 1 0 1 Nucleus 0.438718569081387 0.438718663811476 0.44398952 0 hPsi_site_12268 iPseU_CNN:0.44398952;iRNA_PseU:0 12269 chr16 89199611 89199611 1 + A G UCEC 89199610 + 89199590 89199630 41 GACCCTCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAA GACCCTCCGTGTTTCGAGAATGCTGGAATAAACCAGAAGAA < 41bp 0.806846583202593 0.401987259619638 0.4095287 0.27725124 prediction 0.613693166405186 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89199610 chr16:89199611 nonsynonymous SNV 0.837 4 22 hPsi_associated_SNPs_6852 0 0 1 0 2 chromatin 0.438896110236601 0.439176182828153 0 0 hPsi_site_12269 iPseU_CNN:0;iRNA_PseU:0 12270 chr4 178366156 178366156 1 + A G rs185611252 178366155 + 178366135 178366175 41 AGGAGGGCGTGGTCCCCAGCTAGGGCTTCATCCCTGGGCCT AGGAGGGCGTGGTCCCCAGCTGGGGCTTCATCCCTGGGCCT < 41bp 0.806840535313341 0.477368902534561 0.6865936 0.3379004 prediction 0.613681070626683 Functional Loss - AGA;LINC01098 ENSG00000250131 ncRNA_exonic Human antisense chr4:178366155 chr4:178366156 . . 0 22 hPsi_associated_SNPs_6853 0 0 0 0 0 unknown 0.438718593019408 0.438718424049335 0.3731872 0 hPsi_site_12270 iPseU_CNN:0.3731872;iRNA_PseU:0 12271 chr15 89859688 89859688 1 + T C ESCA 89859689 - 89859669 89859709 41 ATTAACTCAGGCATTTCATTTATTTTTTCCTTTTCTTCTTG ATTAACTCAGGCATTTCATTTGTTTTTTCCTTTTCTTCTTG < 41bp 0.880223669433704 0.573411442881528 0.3042853 0.29029548 prediction 0.613624453104351 Functional Loss - FANCI ENSG00000140525 CDS Human protein_coding chr15:89859689 chr15:89859688 stoploss 0.988 0 22 hPsi_associated_SNPs_6854 0 0 1 0 0 Nucleus 0.438718449408163 0.438718553393718 0 0 hPsi_site_12271 iPseU_CNN:0;iRNA_PseU:0 12272 chr22 21369537 21369537 1 + A G UCEC 21369536 + 21369516 21369556 41 CAGGCTGGGGGCTTCTGGATTATAAGACGGAGAAGTATGTG CAGGCTGGGGGCTTCTGGATTGTAAGACGGAGAAGTATGTG < 41bp 0.90849084524285 0.601680339230037 0.39256096 0.32268032 prediction 0.613621012025625 Functional Loss - P2RX6 ENSG00000099957 CDS Human protein_coding chr22:21369536 chr22:21369537 nonsynonymous SNV 0.877 4 22 hPsi_associated_SNPs_6855 0 0 0 0 2 chromatin 0.438719073012997 0.438719274368603 0 0 hPsi_site_12272 iPseU_CNN:0;iRNA_PseU:0 12273 chr10 51584884 51584884 1 + T G UCEC 51584883 + 51584863 51584903 41 GTCGTGAAACCAGTGAGAAGTTTAAGCTCTTATTCCAGTCC GTCGTGAAACCAGTGAGAAGTGTAAGCTCTTATTCCAGTCC < 41bp 0.806808662748506 0.465644321168076 0.4782457 0.35639393 prediction 0.613617325497012 Functional Loss - NCOA4 ENSG00000138293 CDS Human other chr10:51584883 chr10:51584884 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_6856 0 0 0 0 0 Cytosol 0.441400453589626 0.438347090033415 0 0 hPsi_site_12273 iPseU_CNN:0;iRNA_PseU:0 12274 chr12 10218209 10218209 1 + A C BLCA 10218208 + 10218188 10218228 41 AGTATTTTATCTGTGAGAAGTATGCGTTGAGATCCTCTGTC AGTATTTTATCTGTGAGAAGTCTGCGTTGAGATCCTCTGTC < 41bp 0.806795063115336 0.456001982401408 0.614482 0.2906748 prediction 0.613590126230672 Functional Loss - CLEC9A ENSG00000197992 CDS Human protein_coding chr12:10218208 chr12:10218209 nonsynonymous SNV 0.300 0 22 hPsi_associated_SNPs_6857 0 0 0 0 0 exosome 0.438695911930531 0.438718505640064 0.228964 0 hPsi_site_12274 iPseU_CNN:0.228964;iRNA_PseU:0 12275 chr16 74419299 74419299 1 + A G UCEC 74419298 + 74419278 74419318 41 ACATGATGGATCCACGGATGTACAGCAGAGAGCCTGGAGGT ACATGATGGATCCACGGATGTGCAGCAGAGAGCCTGGAGGT < 41bp 0.902363381314225 0.595575818108262 0.65868074 0.31467432 prediction 0.613575126411926 Functional Loss - NPIPB15 ENSG00000196436 CDS Human protein_coding chr16:74419298 chr16:74419299 synonymous SNV . 0 22 hPsi_associated_SNPs_6858 0 0 0 0 2 Endoplasmic reticulum 0.43354495908914 0.430505007250851 0.31736148 0 hPsi_site_12275 iPseU_CNN:0.31736148;iRNA_PseU:0 12276 chr17 9489252 9489252 1 + A G STAD 9489251 + 9489231 9489271 41 CCATCTCCAGGTCTGGAGAGTACATCGCCTCCGGACAAGTC CCATCTCCAGGTCTGGAGAGTGCATCGCCTCCGGACAAGTC < 41bp 0.806774444979031 0.378469702647577 0.7622643 0.3571142 prediction 0.613548889958061 Functional Loss - CFAP52 ENSG00000166596 CDS Human protein_coding chr17:9489251 chr17:9489252 nonsynonymous SNV 0.190 4 22 hPsi_associated_SNPs_6859 0 0 0 0 1 nucleus 0.438706381566233 0.438712057229862 0.5245286 0 hPsi_site_12276 iPseU_CNN:0.5245286;iRNA_PseU:0 12277 chr3 179052048 179052048 1 + A G UCEC 179052047 + 179052027 179052067 41 TTTATCTGAAGGGATTTATTTATGTCAATATTGTGAATATT TTTATCTGAAGGGATTTATTTGTGTCAATATTGTGAATATT < 41bp 0.806764793748683 0.426191506305795 0.22235733 0.2139872 prediction 0.613529587497366 Functional Loss - ZNF639 ENSG00000121864 CDS Human protein_coding chr3:179052047 chr3:179052048 synonymous SNV . 0 22 hPsi_associated_SNPs_6860 0 0 1 0 0 Nucleus 0.438725770771139 0.438718780969584 0 0 hPsi_site_12277 iPseU_CNN:0;iRNA_PseU:0 12278 chr6 31107660 31107660 1 + A G OV 31107659 + 31107639 31107679 41 CCTTGGCTCCAACTCTATTGTACTCGTCTCCTCCCTCCCAT CCTTGGCTCCAACTCTATTGTGCTCGTCTCCTCCCTCCCAT < 41bp 0.879313353391293 0.57255210417308 0.8534233 0.30381146 prediction 0.613522498436427 Functional Loss - PSORS1C1 ENSG00000204540 CDS Human protein_coding chr6:31107659 chr6:31107660 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_6861 0 0 0 0 0 Cytosol 0.438718593631006 0.438718593343048 0.7068466 0 hPsi_site_12278 iPseU_CNN:0.7068466;iRNA_PseU:0 12279 chr1 40716992 40716992 1 + A G PAAD 40716991 + 40716971 40717011 41 TAATCACACTCTACAAACTTTACAAGAAGGGCTCACATATT TAATCACACTCTACAAACTTTGCAAGAAGGGCTCACATATT < 41bp 0.892832599822258 0.586071802722434 0.5648819 0.25209227 prediction 0.613521594199649 Functional Loss - TMCO2 ENSG00000188800 CDS Human protein_coding chr1:40716991 chr1:40716992 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6862 0 0 0 0 1 exosome 0.438718580882399 0.438718577110331 0.1297638 0 hPsi_site_12279 iPseU_CNN:0.1297638;iRNA_PseU:0 12280 chr22 39917543 39917543 1 + A G PRAD 39917542 + 39917522 39917562 41 TTTGGGGGCTGAAGAAAGCCTAGGTCTCTTAGATGATTACC TTTGGGGGCTGAAGAAAGCCTGGGTCTCTTAGATGATTACC < 41bp 0.80675248780373 0.393331179822816 0.29268384 0.28196466 prediction 0.61350497560746 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917542 chr22:39917543 synonymous SNV . 0 22 hPsi_associated_SNPs_6863 0 0 1 0 0 Ribosome 0.43871859297321 0.438718592995106 0 0 hPsi_site_12280 iPseU_CNN:0;iRNA_PseU:0 12281 chr15 45253745 45253745 1 + T G UCEC 45253744 + 45253724 45253764 41 TAAGAAGAAAAATTGGTAGTTTTATTTGGGAACAAGACCAA TAAGAAGAAAAATTGGTAGTTGTATTTGGGAACAAGACCAA < 41bp 0.817041639551735 0.51028967415279 0.5752728 0.34671277 prediction 0.61350393079789 Functional Loss - TERB2 ENSG00000167014 CDS Human protein_coding chr15:45253744 chr15:45253745 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6864 0 0 0 0 2 unknown 0.438718592995101 0.438718592995102 0.1505456 0 hPsi_site_12281 iPseU_CNN:0.1505456;iRNA_PseU:0 12282 chr4 95204378 95204378 1 + A C CESC 95204377 + 95204357 95204397 41 CTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTG CTGACTTCAGCAAATGTTGTTCTACTTCACGATATTGACTG < 41bp 0.863383480041767 0.556680536408897 0.46319845 0.40294272 prediction 0.61340588726574 Functional Loss - SMARCAD1 ENSG00000163104 CDS Human protein_coding chr4:95204377 chr4:95204378 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6865 0 0 1 0 1 Nucleus 0.438710012428553 0.436695557488708 0 0 hPsi_site_12282 iPseU_CNN:0;iRNA_PseU:0 12283 chr13 47127796 47127796 1 + A G rs140805489 47127795 + 47127775 47127815 41 AAATTGAAGGAATTTCCCCGTACCGCAGCCCCCGGGCACGA AAATTGAAGGAATTTCCCCGTGCCGCAGCCCCCGGGCACGA < 41bp 0.806701015048639 0.392114355517269 0.85305434 0.5268315 prediction 0.613402030097278 Functional Loss - LRCH1 ENSG00000136141 CDS Human protein_coding chr13:47127795 chr13:47127796 nonsynonymous SNV 0.676 0 22 hPsi_associated_SNPs_6866 0 0 0 0 1 Cytosol 0.4387280571239 0.438718596134122 0.65244568 0 hPsi_site_12283 iPseU_CNN:0.65244568;iRNA_PseU:0 12284 chrX 75650760 75650760 1 + A C UCEC 75650759 + 75650739 75650779 41 GATCCCAGGAATCACTCCTATACTCTGTACAACCGAAGGGA GATCCCAGGAATCACTCCTATCCTCTGTACAACCGAAGGGA < 41bp 0.806690372674615 0.441649544343936 0.66938734 0.33401752 prediction 0.613380745349229 Functional Loss - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75650759 chrX:75650760 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_6867 0 0 0 0 0 membrane 0.438718514922942 0.438718494230725 0.33877468 0 hPsi_site_12284 iPseU_CNN:0.33877468;iRNA_PseU:0 12285 chr4 154626387 154626387 1 + A G LUAD 154626386 + 154626366 154626406 41 TCAGCGGGAAGGATTTTGGGTAAATCTGAGAGCTGCGATAA TCAGCGGGAAGGATTTTGGGTGAATCTGAGAGCTGCGATAA < 41bp 0.806685621205014 0.396718200864699 0.90022016 0.7178344 prediction 0.613371242410027 Functional Loss - TLR2 ENSG00000137462 CDS Human protein_coding chr4:154626386 chr4:154626387 synonymous SNV . 0 22 hPsi_associated_SNPs_6868 0 0 0 0 0 exosome 0.438718591489011 0.438846296196766 0.36477152 0 hPsi_site_12285 iPseU_CNN:0.36477152;iRNA_PseU:0 12286 chr1 46159244 46159244 1 + A C rs56220330 46159243 + 46159223 46159263 41 GGCTTATGGAGCCAGTTTCCTATCTTTCTTGGGTGGGATCA GGCTTATGGAGCCAGTTTCCTCTCTTTCTTGGGTGGGATCA < 41bp 0.867568867027469 0.560891159158631 0.28983822 0.23533279 prediction 0.613355415737675 Functional Loss - TMEM69 ENSG00000159596 CDS Human protein_coding chr1:46159243 chr1:46159244 synonymous SNV . 0 22 hPsi_associated_SNPs_6869 0 0 1 0 0 Ribosome 0.438714879619308 0.438723768589609 0 0 hPsi_site_12286 iPseU_CNN:0;iRNA_PseU:0 12287 chr3 98251090 98251090 1 + T G UCEC 98251089 + 98251069 98251109 41 CCGAAGACTGATCGACATCTTTATCATCAATCTGGCTGCCT CCGAAGACTGATCGACATCTTGATCATCAATCTGGCTGCCT < 41bp 0.816527250361389 0.509857647319605 0.607881 0.14923006 prediction 0.613339206083568 Functional Loss - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251089 chr3:98251090 nonsynonymous SNV 0.893 4 22 hPsi_associated_SNPs_6870 0 0 0 0 0 exosome 0.438787632653049 0.438588858950503 0.215762 0 hPsi_site_12287 iPseU_CNN:0.215762;iRNA_PseU:0 12288 chr15 59409015 59409015 1 + A G rs143578095 59409014 + 59408994 59409034 41 TACATCACAGACAATGCTTATACCAGTTCCCAAATCCGAGA TACATCACAGACAATGCTTATGCCAGTTCCCAAATCCGAGA < 41bp 0.806655846035689 0.388321569298249 0.6837763 0.34485814 prediction 0.613311692071378 Functional Loss - CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59409014 chr15:59409015 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6871 0 0 1 0 0 Ribosome 0.43868688053678 0.438708204297567 0.3675526 0 hPsi_site_12288 iPseU_CNN:0.3675526;iRNA_PseU:0 12289 chr6 139159574 139159574 1 + A G UCEC 139159573 + 139159553 139159593 41 CCACGCTTCATTTCTCTATATATCTTTTCCTTTTTGAGTCC CCACGCTTCATTTCTCTATATGTCTTTTCCTTTTTGAGTCC < 41bp 0.806653925804194 0.387013811443805 0.36311907 0.3317544 prediction 0.613307851608388 Functional Loss - ECT2L ENSG00000203734 CDS Human protein_coding chr6:139159573 chr6:139159574 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_6872 0 0 0 0 2 chromatin 0.438718551481755 0.438718607849859 0 0 hPsi_site_12289 iPseU_CNN:0;iRNA_PseU:0 12290 chr12 102056190 102056190 1 + T G UCEC 102056189 + 102056169 102056209 41 CCAGGTGGATGAGGCTGAATTTTGATCTCTGCAAAGAAACA CCAGGTGGATGAGGCTGAATTGTGATCTCTGCAAAGAAACA < 41bp 0.837395032472784 0.530747864623753 0.62449926 0.33435437 prediction 0.613294335698063 Functional Loss - MYBPC1 ENSG00000196091 CDS Human protein_coding chr12:102056189 chr12:102056190 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6873 0 0 0 0 1 nucleus 0.43871859299445 0.438701904521664 0.24899852 0 hPsi_site_12290 iPseU_CNN:0.24899852;iRNA_PseU:0 12291 chr18 12129664 12129664 1 + A G rs4797622 12129663 + 12129643 12129683 41 AGGCTGAGGCAGGAGAATGGTATGAACCCGGGAGGCGGAGC AGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCGGAGC < 41bp 0.806622278794664 0.49340318713551 0.6456763 0.38859296 prediction 0.613244557589328 Functional Loss - ANKRD62 ENSG00000181626 UTR3 Human protein_coding chr18:12129663 chr18:12129664 . . 0 22 hPsi_associated_SNPs_6874 0 0 0 0 0 exosome 0.438700782343676 0.438729440545172 0.2913526 0 hPsi_site_12291 iPseU_CNN:0.2913526;iRNA_PseU:0 12292 chr1 220928369 220928369 1 + A G LGG 220928368 + 220928348 220928388 41 TCGTGCTCATCTCCATCATTTATGAGAATAACTGCCTGATC TCGTGCTCATCTCCATCATTTGTGAGAATAACTGCCTGATC < 41bp 0.910696170489561 0.604075960674814 0.58378136 0.6909399 prediction 0.613240419629492 Functional Loss - MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928368 chr1:220928369 nonsynonymous SNV 0.138 0 22 hPsi_associated_SNPs_6875 0 0 1 0 2 nucleus 0.438706227307867 0.438691712133095 0 0 hPsi_site_12292 iPseU_CNN:0;iRNA_PseU:0 12293 chr11 64082320 64082320 1 + A G BLCA 64082319 + 64082299 64082339 41 GGGCACCTCCCAGCCGTGGCTACCCTCTGTGACCTCTTTGA GGGCACCTCCCAGCCGTGGCTGCCCTCTGTGACCTCTTTGA < 41bp 0.914071934805467 0.60747301648987 0.4233372 0.22966638 prediction 0.613197836631194 Functional Loss - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64082319 chr11:64082320 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6876 0 0 0 0 1 Cytosol 0.438772018572846 0.438716380469426 0 0 hPsi_site_12293 iPseU_CNN:0;iRNA_PseU:0 12294 chr1 160168476 160168476 1 + A G BLCA 160168475 + 160168455 160168495 41 ACCCCCTGACAGGAGGATGATATGGATGGAATCCACATTGT ACCCCCTGACAGGAGGATGATGTGGATGGAATCCACATTGT < 41bp 0.806585612631092 0.381349592445583 0.6386621 0.31877875 prediction 0.613171225262183 Functional Loss - CASQ1 ENSG00000143318 CDS Human protein_coding chr1:160168475 chr1:160168476 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_6877 0 0 0 0 2 exosome 0.438716329661025 0.43873116613667 0.2773242 0 hPsi_site_12294 iPseU_CNN:0.2773242;iRNA_PseU:0 12295 chr1 158151442 158151442 1 + A G BLCA 158151441 + 158151421 158151461 41 CAGTGGGAGACGCTGCAGCATATATTTCGGGTTTATCGAAG CAGTGGGAGACGCTGCAGCATGTATTTCGGGTTTATCGAAG < 41bp 0.806571510124318 0.381862204159904 0.3851925 0.28906238 prediction 0.613143020248636 Functional Loss - CD1D ENSG00000158473 CDS Human protein_coding chr1:158151441 chr1:158151442 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6878 0 0 0 0 1 Endoplasmic reticulum 0.438718592573279 0.438718594784123 0 0 hPsi_site_12295 iPseU_CNN:0;iRNA_PseU:0 Self-reported math ability 12296 chr10 74645544 74645544 1 + A G UCEC 74645543 + 74645523 74645563 41 ACTGAGAGACCCATTACAAGTACATCTGCCTCTCCGACAAA ACTGAGAGACCCATTACAAGTGCATCTGCCTCTCCGACAAA < 41bp 0.90155764803568 0.59499911807588 0.78752327 0.2515499 prediction 0.613117059919599 Functional Loss - MCU ENSG00000156026 CDS Human protein_coding chr10:74645543 chr10:74645544 synonymous SNV . 0 22 hPsi_associated_SNPs_6879 0 0 0 0 1 Ribosome 0.438717903165371 0.438718635174947 0.57504654 0 hPsi_site_12296 iPseU_CNN:0.57504654;iRNA_PseU:0 12297 chrX 48542809 48542809 1 + T G UCEC 48542808 + 48542788 48542828 41 CTTCATCCGCCTTTACGGCCTTCAGGTGACCCCCCCACCCC CTTCATCCGCCTTTACGGCCTGCAGGTGACCCCCCCACCCC < 41bp 0.806543349797805 0.477262944308207 0.38787502 0.23173651 prediction 0.613086699595609 Functional Loss - WAS ENSG00000015285 CDS Human protein_coding chrX:48542808 chrX:48542809 synonymous SNV . 0 22 hPsi_associated_SNPs_6880 0 0 0 0 1 Endoplasmic reticulum 0.438718595353579 0.438718594987179 0 0 hPsi_site_12297 iPseU_CNN:0;iRNA_PseU:0 12298 chr2 113993138 113993138 1 + A G LUSC 113993137 + 113993117 113993157 41 ACCTCGGGGGTTTCCTGCTTTATGGCGAAGGGTGAGTGAGG ACCTCGGGGGTTTCCTGCTTTGTGGCGAAGGGTGAGTGAGG < 41bp 0.905160342225064 0.598648448656896 0.62486327 0.39927864 prediction 0.613023787136335 Functional Loss - PAX8 ENSG00000125618 CDS Human protein_coding chr2:113993137 chr2:113993138 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6881 0 0 0 0 0 Endoplasmic reticulum 0.438718592990862 0.438718592993083 0.24972654 0 hPsi_site_12298 iPseU_CNN:0.24972654;iRNA_PseU:0 12299 chr7 94293419 94293419 1 + A G STAD 94293418 + 94293398 94293438 41 GCATGGGGTCTGTCATCGACTACTCCAATGCTTTCCAGATG GCATGGGGTCTGTCATCGACTGCTCCAATGCTTTCCAGATG < 41bp 0.806479102567929 0.371851499809807 0.3830421 0.3375231 prediction 0.612958205135857 Functional Loss - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293418 chr7:94293419 nonsynonymous SNV 0.582 3 22 hPsi_associated_SNPs_6882 0 0 1 0 0 Endoplasmic reticulum 0.42615447896899 0.438793378611822 0 0 hPsi_site_12299 iPseU_CNN:0;iRNA_PseU:0 12300 chr3 63542368 63542368 1 + A G UCEC 63542367 + 63542347 63542387 41 CTTTGGCTGCCACTGTCGTTTACATTTTCTTCCAGAACAAA CTTTGGCTGCCACTGTCGTTTGCATTTTCTTCCAGAACAAA < 41bp 0.904243007535603 0.597786940628299 0.42710325 0.25515386 prediction 0.612912133814607 Functional Loss - SYNPR ENSG00000163630 CDS Human protein_coding chr3:63542367 chr3:63542368 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6883 0 0 0 5 1 unknown 0.438723260652436 0.438714945498242 0 0 hPsi_site_12300 iPseU_CNN:0;iRNA_PseU:0 12301 chr6 43749754 43749754 1 + A G LGG 43749753 + 43749733 43749773 41 GTACAAGATCCGCAGACGTGTAAATGTTCCTGCAAAAACAC GTACAAGATCCGCAGACGTGTGAATGTTCCTGCAAAAACAC < 41bp 0.903191181744955 0.59674564079398 0.4548834 0.28686142 prediction 0.61289108190195 Functional Loss - VEGFA ENSG00000112715 CDS Human protein_coding chr6:43749753 chr6:43749754 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_6884 0 0 1 0 2 Nucleus 0.435112668543529 0.400068234435912 0 0 hPsi_site_12301 iPseU_CNN:0;iRNA_PseU:0 12302 chr6 41303644 41303644 1 + A G UCEC 41303643 + 41303623 41303663 41 GCGAGCCCTACACCCACTGCTACTGCTGCTGCTGCTGTTCC GCGAGCCCTACACCCACTGCTGCTGCTGCTGCTGCTGTTCC < 41bp 0.806443111522696 0.398570416163955 0.34426126 0.23891327 prediction 0.612886223045391 Functional Loss - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41303643 chr6:41303644 synonymous SNV . 0 22 hPsi_associated_SNPs_6885 0 0 0 0 1 exosome 0.438728066877715 0.437928899755178 0 0 hPsi_site_12302 iPseU_CNN:0;iRNA_PseU:0 12303 chr1 248525893 248525893 1 + A G LIHC 248525892 + 248525872 248525912 41 GGGGGCTCTGAAGAAAATGTTAACAGTGGAACCTGCCTTTC GGGGGCTCTGAAGAAAATGTTGACAGTGGAACCTGCCTTTC < 41bp 0.890888616150644 0.584456846466832 0.6342235 0.2781446 prediction 0.612863539367624 Functional Loss - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525892 chr1:248525893 synonymous SNV . 0 22 hPsi_associated_SNPs_6886 0 0 0 0 0 unknown 0.43871866619535 0.438718543476324 0.268447 0 hPsi_site_12303 iPseU_CNN:0.268447;iRNA_PseU:0 not specified not specified 12304 chr16 88066787 88066787 1 + A G LUSC 88066786 + 88066766 88066806 41 CGCAGCCGCAGGCCCTGCACTACGCGCTGGCCAACGCACAG CGCAGCCGCAGGCCCTGCACTGCGCGCTGGCCAACGCACAG < 41bp 0.80642576328489 0.371959453597421 0.77412784 0.3124454 prediction 0.612851526569779 Functional Loss - BANP ENSG00000172530 CDS Human protein_coding chr16:88066786 chr16:88066787 nonsynonymous SNV 0.619 4 22 hPsi_associated_SNPs_6887 0 0 0 0 1 Cytosol 0.432679241427996 0.437824356649291 0.54825568 0 hPsi_site_12304 iPseU_CNN:0.54825568;iRNA_PseU:0 12305 chr17 40460337 40460337 1 + A C COAD 40460336 + 40460316 40460356 41 ATGAGGTCTTCTCCAAGTACTACACTCCTGTGCTGGGTGGG ATGAGGTCTTCTCCAAGTACTCCACTCCTGTGCTGGGTGGG < 41bp 0.806418331438116 0.430110044926749 0.7548958 0.305978 prediction 0.612836662876232 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40460336 chr17:40460337 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6888 0 0 1 0 1 Ribosome 0.438022382488357 0.438719782365128 0.5097916 0 hPsi_site_12305 iPseU_CNN:0.5097916;iRNA_PseU:0 12306 chr12 56628638 56628638 1 + T G UCEC 56628637 + 56628617 56628657 41 GGCTCCCAGCTGCTGGTCAATTTTGGCTTGAGCCCCGCTGC GGCTCCCAGCTGCTGGTCAATGTTGGCTTGAGCCCCGCTGC < 41bp 0.851637964768711 0.545261731310068 0.75403243 0.48953202 prediction 0.612752466917286 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56628637 chr12:56628638 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6889 0 0 1 0 0 cytosol 0.438719135527676 0.43871785583139 0.50806486 0 hPsi_site_12306 iPseU_CNN:0.50806486;iRNA_PseU:0 12307 chrY 15024673 15024673 1 + A G THCA 15024672 + 15024652 15024692 41 GGACGGAGTGACTATGATGGTATTGGCAATCGTGAAAGACC GGACGGAGTGACTATGATGGTGTTGGCAATCGTGAAAGACC < 41bp 0.806373931479689 0.385808267029396 0.72837234 0.33563626 prediction 0.612747862959378 Functional Loss - DDX3Y ENSG00000067048 CDS Human protein_coding chrY:15024672 chrY:15024673 nonsynonymous SNV 0.045 0 22 hPsi_associated_SNPs_6890 0 0 1 0 1 Nucleus 0.438668143349919 0.439039089722113 0.45674468 0 hPsi_site_12307 iPseU_CNN:0.45674468;iRNA_PseU:0 12308 chr1 183093967 183093967 1 + T G SKCM 183093966 + 183093946 183093986 41 GTGACCGGTGCAAAGACGGATTTTTTGGAAATCCCCTGGCT GTGACCGGTGCAAAGACGGATGTTTTGGAAATCCCCTGGCT < 41bp 0.806369410888101 0.460738793240698 0.5819792 0.29621917 prediction 0.612738821776203 Functional Loss - LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183093966 chr1:183093967 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_6891 0 0 1 0 1 Ribosome 0.438697344210958 0.440972115186386 0.1639584 0 hPsi_site_12308 iPseU_CNN:0.1639584;iRNA_PseU:0 12309 chr1 82456538 82456538 1 + A G COAD 82456537 + 82456517 82456557 41 AGCAGAGGCTGAAGATCACCTACAGTCCCCCAACAGAGACT AGCAGAGGCTGAAGATCACCTGCAGTCCCCCAACAGAGACT < 41bp 0.880265136689238 0.573914762742368 0.46469384 0.26955062 prediction 0.612700747893741 Functional Loss - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456537 chr1:82456538 synonymous SNV . 0 22 hPsi_associated_SNPs_6892 0 0 0 0 0 cytosol 0.438718592997112 0.438718593007365 0 0 hPsi_site_12309 iPseU_CNN:0;iRNA_PseU:0 12310 chr1 27121304 27121304 1 + A G BLCA 27121303 + 27121283 27121323 41 CCCTCTTTCAGTATTATGCCTACACCCAATTCTGTCTGCCA CCCTCTTTCAGTATTATGCCTGCACCCAATTCTGTCTGCCA < 41bp 0.80633881299149 0.374154299837491 0.571512 0.29269102 prediction 0.612677625982981 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27121303 chr1:27121304 nonsynonymous SNV 0.815 5 22 hPsi_associated_SNPs_6893 0 0 1 0 1 Endoplasmic reticulum 0.43883462481277 0.438717900509061 0.143024 0 hPsi_site_12310 iPseU_CNN:0.143024;iRNA_PseU:0 12311 chr8 125499091 125499091 1 + A G rs147220970 125499090 + 125499070 125499110 41 TTTGTCTCTGCTTGCCTGTTTATTCTTCCTGTCTTACTCAG TTTGTCTCTGCTTGCCTGTTTGTTCTTCCTGTCTTACTCAG < 41bp 0.904002730988007 0.597664365054959 0.357256 0.3383212 prediction 0.612676731866096 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125499090 chr8:125499091 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_6894 0 0 1 0 0 Ribosome 0.438522570794157 0.438715626434082 0 0 hPsi_site_12311 iPseU_CNN:0;iRNA_PseU:0 12312 chr12 53647654 53647654 1 + A G UCEC 53647653 + 53647633 53647673 41 GAGTCCGGTGGAGTCCTTCATAGCCTTTCTACTTATTGAGT GAGTCCGGTGGAGTCCTTCATGGCCTTTCTACTTATTGAGT < 41bp 0.80632741076868 0.388678744910306 0.22717306 0.08935073 prediction 0.61265482153736 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647653 chr12:53647654 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_6895 0 0 0 0 0 Endoplasmic reticulum 0.438718590065769 0.438718593302959 0 0 hPsi_site_12312 iPseU_CNN:0;iRNA_PseU:0 12313 chr4 89649761 89649761 1 + A G UCEC 89649760 + 89649740 89649780 41 GTTTCGCCTTTATGTGCTTATATTCACTGTATTCTTCAGCC GTTTCGCCTTTATGTGCTTATGTTCACTGTATTCTTCAGCC < 41bp 0.901960893783109 0.595647793370894 0.6509726 0.40259898 prediction 0.61262620082443 Functional Loss - FAM13A ENSG00000138640 CDS Human protein_coding chr4:89649760 chr4:89649761 nonsynonymous SNV 0.898 4 22 hPsi_associated_SNPs_6896 0 0 0 1 0 Nucleus 0.43871858996391 0.438718597030037 0.3019452 0 hPsi_site_12313 iPseU_CNN:0.3019452;iRNA_PseU:0 12314 chrX 128902770 128902770 1 + A G rs749654284 128902769 + 128902749 128902789 41 TGATCTCAGTAGGCCTAACCTATAACCTAGCACAGACTGCT TGATCTCAGTAGGCCTAACCTGTAACCTAGCACAGACTGCT < 41bp 0.806312800856103 0.398796568950049 0.5031503 0.27402747 prediction 0.612625601712206 Functional Loss - XPNPEP2 ENSG00000122121 UTR3 Human protein_coding chrX:128902769 chrX:128902770 . . 0 22 hPsi_associated_SNPs_6897 0 0 0 1 0 exosome 0.438718604517175 0.438718618467329 0.0063006000000001 0 hPsi_site_12314 iPseU_CNN:0.0063006000000001;iRNA_PseU:0 12315 chr2 113404573 113404573 1 + A G KIRP 113404572 + 113404552 113404592 41 TACAGCTGTGGGCTCAGGTGTAGTGACCCTGAAGCAAGCCT TACAGCTGTGGGCTCAGGTGTGGTGACCCTGAAGCAAGCCT < 41bp 0.806310142053338 0.375835565177519 0.75373435 0.4346854 prediction 0.612620284106676 Functional Loss - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113404572 chr2:113404573 synonymous SNV . 0 22 hPsi_associated_SNPs_6898 0 0 1 0 0 Ribosome 0.438880702349432 0.43874370262132 0.5074687 0 hPsi_site_12315 iPseU_CNN:0.5074687;iRNA_PseU:0 12316 chr2 150327224 150327224 1 + A G SKCM 150327223 + 150327203 150327243 41 ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCC ACTTCTTGTTGTGAAGGAAATGTCTGTAACTTGCCACTGCC < 41bp 0.806308091825451 0.406264694019393 0.58048344 0.4323476 prediction 0.612616183650902 Functional Loss - LYPD6 ENSG00000187123 CDS Human protein_coding chr2:150327223 chr2:150327224 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6899 0 0 1 7 1 Cytosol 0.438332057936769 0.438052327727138 0.16096688 0 hPsi_site_12316 iPseU_CNN:0.16096688;iRNA_PseU:0 12317 chr5 151184036 151184036 1 + A G rs577575444 151184035 + 151184015 151184055 41 TCATTCATTGGAATATTTCTTATTTTCTACGTGTTTGAAAA TCATTCATTGGAATATTTCTTGTTTTCTACGTGTTTGAAAA < 41bp 0.806299826197376 0.428076345305239 0.3611803 0.24048147 prediction 0.612599652394752 Functional Loss - G3BP1 ENSG00000145907 UTR3 Human protein_coding chr5:151184035 chr5:151184036 . . 0 22 hPsi_associated_SNPs_6900 0 0 1 1 0 Cytosol 0.438721368866097 0.438768169839169 0 0 hPsi_site_12317 iPseU_CNN:0;iRNA_PseU:0 12318 chr5 132089226 132089226 1 + A G rs192784762 132089225 + 132089205 132089245 41 ACCCAACCATGGCTATGACTTATGTCTTCCCTTTACAAGGA ACCCAACCATGGCTATGACTTGTGTCTTCCCTTTACAAGGA < 41bp 0.891059275179538 0.584804975950195 0.45383793 0.3646476 prediction 0.612508598458687 Functional Loss - CCNI2 ENSG00000205089 UTR3 Human protein_coding chr5:132089225 chr5:132089226 . . 0 22 hPsi_associated_SNPs_6901 0 0 0 1 0 nucleus 0.438718592872893 0.438718707985675 0 0 hPsi_site_12318 iPseU_CNN:0;iRNA_PseU:0 12319 chr20 34022548 34022548 1 + T C STAD 34022549 - 34022529 34022569 41 CCGTGGTCAGGAAGCAGAGGTACGTGTTTGACATTAGTGCC CCGTGGTCAGGAAGCAGAGGTGCGTGTTTGACATTAGTGCC < 41bp 0.912227330897772 0.605979283207498 0.60580546 0.22401431 prediction 0.612496095380547 Functional Loss - GDF5;GDF5OS ENSG00000125965;ENSG00000204183 CDS Human other chr20:34022549 chr20:34022548 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6902 0 0 0 0 1 unknown 0.438713358229826 0.438718421616799 0.21161092 0 hPsi_site_12319 iPseU_CNN:0.21161092;iRNA_PseU:0 12320 chr10 94824197 94824197 1 + T G UCEC 94824196 + 94824176 94824216 41 GGGGGCCATTTCTGAGAAGCTTCACGAGGACAAGGCTGCAG GGGGGCCATTTCTGAGAAGCTGCACGAGGACAAGGCTGCAG < 41bp 0.835921134910208 0.529690131350123 0.7143738 0.43304724 prediction 0.612462007120169 Functional Loss - CYP26C1 ENSG00000187553 CDS Human protein_coding chr10:94824196 chr10:94824197 synonymous SNV . 0 22 hPsi_associated_SNPs_6903 0 0 0 0 2 exosome 0.438717888695772 0.438711973980894 0.4287476 0 hPsi_site_12320 iPseU_CNN:0.4287476;iRNA_PseU:0 12321 chr8 39873026 39873026 1 + T G UCEC 39873025 + 39873005 39873045 41 CTCCCAGGGCCTCCTCAGGCTTTAAAAGACAGGGGCACAGG CTCCCAGGGCCTCCTCAGGCTGTAAAAGACAGGGGCACAGG < 41bp 0.806201314547802 0.482673403832853 0.40504947 0.2975865 prediction 0.612402629095604 Functional Loss - IDO2 ENSG00000188676 CDS Human protein_coding chr8:39873025 chr8:39873026 nonsynonymous SNV 0.045 2 22 hPsi_associated_SNPs_6904 0 0 0 0 0 exosome 0.438794892722202 0.438715922260736 0 0 hPsi_site_12321 iPseU_CNN:0;iRNA_PseU:0 12322 chr6 53518668 53518668 1 + A G rs185695486 53518667 + 53518647 53518687 41 ATATGTAAAATCAGAATAATTATATCTTCCCCGCCCACCTC ATATGTAAAATCAGAATAATTGTATCTTCCCCGCCCACCTC < 41bp 0.806198695498816 0.453106292367097 0.6190304 0.3927949 prediction 0.612397390997633 Functional Loss - KLHL31 ENSG00000124743 intronic Human protein_coding chr6:53518667 chr6:53518668 . . 0 22 hPsi_associated_SNPs_6905 0 0 0 0 0 exosome 0.438718592987728 0.438718592994949 0.2380608 0 hPsi_site_12322 iPseU_CNN:0.2380608;iRNA_PseU:0 12323 chr4 128814679 128814679 1 + T G UCEC 128814678 + 128814658 128814698 41 TTTGAAATAGGGTCATCGTATTTGTTTAGCACTGGAATCCA TTTGAAATAGGGTCATCGTATGTGTTTAGCACTGGAATCCA < 41bp 0.806196728269299 0.472457875684828 0.3933557 0.32663924 prediction 0.612393456538598 Functional Loss - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128814678 chr4:128814679 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_6906 0 0 1 0 1 Cytosol 0.438718592650541 0.43871857215252 0 0 hPsi_site_12323 iPseU_CNN:0;iRNA_PseU:0 12324 chr5 159399951 159399951 1 + A C rs116258303 159399950 + 159399930 159399970 41 ACCTCTCAAGCCCCTCCTTGTACTTCACTGAAGGATGGCAC ACCTCTCAAGCCCCTCCTTGTCCTTCACTGAAGGATGGCAC < 41bp 0.806195771855795 0.49713394697181 0.74644744 0.2715598 prediction 0.61239154371159 Functional Loss - ADRA1B ENSG00000170214 downstream Human protein_coding chr5:159399950 chr5:159399951 . . 0 22 hPsi_associated_SNPs_6907 0 0 0 3 0 exosome 0.438726150638003 0.438674436811695 0.49289488 0 hPsi_site_12324 iPseU_CNN:0.49289488;iRNA_PseU:0 12325 chr11 55406325 55406325 1 + A G UCEC 55406324 + 55406304 55406344 41 GTTTCTTCTCACCATCTTTGTACCATTTTGTGGCCCAAATG GTTTCTTCTCACCATCTTTGTGCCATTTTGTGGCCCAAATG < 41bp 0.806178717387495 0.418214312590667 0.3088895 0.23263612 prediction 0.612357434774989 Functional Loss - OR4P4 ENSG00000181927 CDS Human protein_coding chr11:55406324 chr11:55406325 synonymous SNV . 0 22 hPsi_associated_SNPs_6908 0 0 0 0 0 unknown 0.442191770238657 0.438717375114201 0 0 hPsi_site_12325 iPseU_CNN:0;iRNA_PseU:0 12326 chr17 46051813 46051813 1 + A C PCPG 46051812 + 46051792 46051832 41 TGAGAAGGACAACACCTACTTAGGTAAAGTGGCCCGGCCTG TGAGAAGGACAACACCTACTTCGGTAAAGTGGCCCGGCCTG < 41bp 0.806157446044343 0.443327125093228 0.27496386 0.20970729 prediction 0.612314892088687 Functional Loss - CDK5RAP3 ENSG00000108465 CDS Human protein_coding chr17:46051812 chr17:46051813 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6909 0 0 1 0 2 chromatin 0.438718593128749 0.438718583887696 0 0 hPsi_site_12326 iPseU_CNN:0;iRNA_PseU:0 12327 chr8 125463784 125463784 1 + A G ESCA 125463783 + 125463763 125463803 41 GTAGAGCATGTGGATAATGGTATCCGTTATAAGTTTGACGT GTAGAGCATGTGGATAATGGTGTCCGTTATAAGTTTGACGT < 41bp 0.898906388236692 0.592749471795562 0.6034678 0.34005326 prediction 0.61231383288226 Functional Loss - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125463783 chr8:125463784 nonsynonymous SNV 0.941 4 22 hPsi_associated_SNPs_6910 0 0 1 0 0 Cytosol 0.438718591965719 0.438718474621885 0.2069356 0 hPsi_site_12327 iPseU_CNN:0.2069356;iRNA_PseU:0 12328 chr12 6631152 6631152 1 + A C rs61751201 6631151 + 6631131 6631171 41 TACAGCTTCTCCCGGAAGATTACAGAGGCCATTGGCATCAT TACAGCTTCTCCCGGAAGATTCCAGAGGCCATTGGCATCAT < 41bp 0.885855290341124 0.579700901517847 0.5504299 0.35592878 prediction 0.612308777646553 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6631151 chr12:6631152 nonsynonymous SNV 0.633 2 22 hPsi_associated_SNPs_6911 0 0 1 0 1 Nucleus 0.438992306171968 0.438857775796672 0.1008598 0 hPsi_site_12328 iPseU_CNN:0.1008598;iRNA_PseU:0 12329 chr5 134678971 134678971 1 + A C COAD 134678972 - 134678952 134678992 41 AGAAGCTGAAATCCATTGCATTTCCATCCATCGGCAGCGGC AGAAGCTGAAATCCATTGCATGTCCATCCATCGGCAGCGGC < 41bp 0.851707726390763 0.545569652536332 0.36160368 0.20670342 prediction 0.612276147708861 Functional Loss - C5orf66;H2AFY ENSG00000113648;ENSG00000224186 CDS Human other chr5:134678972 chr5:134678971 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_6912 0 0 1 0 1 unknown 0.438717759363621 0.438784569637485 0 0 hPsi_site_12329 iPseU_CNN:0;iRNA_PseU:0 12330 chr7 128138167 128138167 1 + A G UCEC 128138166 + 128138146 128138186 41 TTCTGCGAGATTACGGCCGCTATGACATGGCTCAGCTTCGG TTCTGCGAGATTACGGCCGCTGTGACATGGCTCAGCTTCGG < 41bp 0.806128105603223 0.37967379455025 0.3936922 0.265407 prediction 0.612256211206447 Functional Loss - METTL2B ENSG00000165055 CDS Human protein_coding chr7:128138166 chr7:128138167 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6913 0 0 1 0 2 Ribosome 0.438718591640647 0.438718591718041 0 0 hPsi_site_12330 iPseU_CNN:0;iRNA_PseU:0 12331 chr9 99488544 99488544 1 + A G rs149149113 99488543 + 99488523 99488563 41 CTGGGCAACCCTACTTTGGCTATATTAGATTTTCAGTTCCC CTGGGCAACCCTACTTTGGCTGTATTAGATTTTCAGTTCCC < 41bp 0.872093620407555 0.565968348083694 0.33919436 0.2995649 prediction 0.612250544647722 Functional Loss - LOC441455 ENSG00000233820 ncRNA_intronic Human transcribed_processed_pseudogene chr9:99488543 chr9:99488544 . . 0 22 hPsi_associated_SNPs_6914 0 0 0 0 0 unknown 0.438706395925679 0.438348990223588 0 0 hPsi_site_12331 iPseU_CNN:0;iRNA_PseU:0 12332 chr1 70881649 70881649 1 + A G LIHC 70881648 + 70881628 70881668 41 GTTTTTTTCAGGGTTTTGAATATAGCCGTTCTGGAAATCCC GTTTTTTTCAGGGTTTTGAATGTAGCCGTTCTGGAAATCCC < 41bp 0.80611891597353 0.392021741827453 0.18731779 0.1296551 prediction 0.612237831947059 Functional Loss - CTH ENSG00000116761 CDS Human protein_coding chr1:70881648 chr1:70881649 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_6915 0 0 1 1 1 Cytosol 0.438719604551834 0.438717119330508 0 0 hPsi_site_12332 iPseU_CNN:0;iRNA_PseU:0 12333 chr15 69728568 69728568 1 + A G UCEC 69728567 + 69728547 69728587 41 GTTTAACGCCTGGGAGGAGATACAGAAACCAGCCTCGAGGT GTTTAACGCCTGGGAGGAGATGCAGAAACCAGCCTCGAGGT < 41bp 0.806115132286992 0.377723173148448 0.7228676 0.33494765 prediction 0.612230264573983 Functional Loss - KIF23 ENSG00000137807 CDS Human protein_coding chr15:69728567 chr15:69728568 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_6916 0 0 1 1 1 Nucleus 0.438664803949181 0.438599678696035 0.4457352 0 hPsi_site_12333 iPseU_CNN:0.4457352;iRNA_PseU:0 12334 chr2 64796285 64796285 1 + A G UCEC 64796284 + 64796264 64796304 41 ATGATGCACATGGCTTGAGATACCAGTGGGGCGGCTCCCAT ATGATGCACATGGCTTGAGATGCCAGTGGGGCGGCTCCCAT < 41bp 0.806110785964118 0.39070180178599 0.40197742 0.19623703 prediction 0.612221571928236 Functional Loss - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64796284 chr2:64796285 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6917 0 0 1 0 2 Ribosome 0.438720282866211 0.438718263528652 0 0 hPsi_site_12334 iPseU_CNN:0;iRNA_PseU:0 12335 chr19 35838149 35838149 1 + A G rs114710783 35838148 + 35838128 35838168 41 ATTGCACAGGGAGACGTACGTATCAGCGGCCCCTTGACTCT ATTGCACAGGGAGACGTACGTGTCAGCGGCCCCTTGACTCT < 41bp 0.864837254520824 0.558742909006019 0.5946203 0.24690443 prediction 0.61218869102961 Functional Loss - CD22 ENSG00000012124 UTR3 Human protein_coding chr19:35838148 chr19:35838149 . . 0 22 hPsi_associated_SNPs_6918 0 0 0 0 0 Endoplasmic reticulum 0.438716745680167 0.438710121331428 0.1892406 0 hPsi_site_12335 iPseU_CNN:0.1892406;iRNA_PseU:0 12336 chr8 144642835 144642835 1 + A G UCEC 144642834 + 144642814 144642854 41 GCAGCCGCGGGGACAACGTGTACGTGGTGACTGAGGTGCTG GCAGCCGCGGGGACAACGTGTGCGTGGTGACTGAGGTGCTG < 41bp 0.91890373366507 0.612822486246084 0.7606075 0.33823922 prediction 0.612162494837972 Functional Loss - GSDMD ENSG00000104518 CDS Human protein_coding chr8:144642834 chr8:144642835 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_6919 0 0 1 0 1 Ribosome 0.438718769154408 0.438717629259422 0.521215 0 hPsi_site_12336 iPseU_CNN:0.521215;iRNA_PseU:0 12337 chr14 24772293 24772293 1 + T G COAD 24772292 + 24772272 24772312 41 CCCATCAGCTGTCCCCTGTGTTTGAGGAGCTGAGCCCTGTC CCCATCAGCTGTCCCCTGTGTGTGAGGAGCTGAGCCCTGTC < 41bp 0.849486719167042 0.543405567688129 0.37633234 0.3386532 prediction 0.612162302957827 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24772292 chr14:24772293 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_6920 0 0 1 0 1 Nucleus 0.438719099934919 0.43871863725159 0 0 hPsi_site_12337 iPseU_CNN:0;iRNA_PseU:0 12338 chr12 14577006 14577006 1 + T G UCEC 14577005 + 14576985 14577025 41 GGCAACCATGAAAATGGAGATTTGGACCCAACCTCACCTTT GGCAACCATGAAAATGGAGATGTGGACCCAACCTCACCTTT < 41bp 0.84313861437569 0.537080310334772 0.7210488 0.4220764 prediction 0.612116608081835 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577005 chr12:14577006 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6921 0 0 1 0 0 Cytosol 0.438718592995553 0.438718593574896 0.4420976 0 hPsi_site_12338 iPseU_CNN:0.4420976;iRNA_PseU:0 12339 chr16 767456 767456 1 + A G rs551737574 767455 + 767435 767475 41 TGCTTTGGAGGTGATGGGACTATCAATAAGAACTCTGTTCA TGCTTTGGAGGTGATGGGACTGTCAATAAGAACTCTGTTCA < 41bp 0.80605538331369 0.461089391368858 0.67197764 0.31157386 prediction 0.61211076662738 Functional Loss - METRN ENSG00000103260 CDS Human protein_coding chr16:767455 chr16:767456 unknown . 0 22 hPsi_associated_SNPs_6922 0 0 1 1 0 Cytosol 0.438736202968267 0.438618159607615 0.34395528 0 hPsi_site_12339 iPseU_CNN:0.34395528;iRNA_PseU:0 12340 chr11 4928703 4928703 1 + A G UCEC 4928702 + 4928682 4928722 41 CCATCCCCATTTGCCTCATGTACCTGCTTGCCATCATGGGC CCATCCCCATTTGCCTCATGTGCCTGCTTGCCATCATGGGC < 41bp 0.896802040200901 0.590767525704009 0.4131688 0.2855508 prediction 0.612069028993782 Functional Loss - OR51A7 ENSG00000176895 CDS Human protein_coding chr11:4928702 chr11:4928703 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_6923 0 0 0 0 0 exosome 0.438718593063381 0.43871860287607 0 0 hPsi_site_12340 iPseU_CNN:0;iRNA_PseU:0 12341 chr21 44182195 44182195 1 + A G STAD 44182194 + 44182174 44182214 41 CTCTCTCCTTGCCTCCCAGGTACCAGATCAATGCCCGCACA CTCTCTCCTTGCCTCCCAGGTGCCAGATCAATGCCCGCACA < 41bp 0.806032502697302 0.42926779941994 0.8888004 0.53828555 prediction 0.612065005394604 Functional Loss - PDE9A ENSG00000160191 CDS Human protein_coding chr21:44182194 chr21:44182195 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_6924 0 0 0 0 1 Nucleus 0.438718656415799 0.438718602975896 0.7010297 0 hPsi_site_12341 iPseU_CNN:0.7010297;iRNA_PseU:0 12342 chr3 195959313 195959313 1 + A C OV 195959312 + 195959292 195959332 41 TCTCCTCATCCTGACTGCCCTACAGCCCTCCATCTTCTCAG TCTCCTCATCCTGACTGCCCTCCAGCCCTCCATCTTCTCAG < 41bp 0.885111890681074 0.579096331299117 0.57066303 0.36486155 prediction 0.612031118763915 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195959312 chr3:195959313 synonymous SNV . 0 22 hPsi_associated_SNPs_6925 0 0 1 0 2 exosome 0.438718593043301 0.438718593034555 0.14132606 0 hPsi_site_12342 iPseU_CNN:0.14132606;iRNA_PseU:0 12343 chr11 126278334 126278334 1 + A C LUSC 126278333 + 126278313 126278353 41 AGACACACTCCTCGTCCTGGTAGCTTTCAAGGCAATGGACT AGACACACTCCTCGTCCTGGTCGCTTTCAAGGCAATGGACT < 41bp 0.886319974402823 0.580307865471181 0.72869384 0.1790959 prediction 0.612024217863284 Functional Loss - ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126278333 chr11:126278334 synonymous SNV . 0 22 hPsi_associated_SNPs_6926 0 0 1 0 1 Ribosome 0.438709536431175 0.438717398529868 0.45738768 0 hPsi_site_12343 iPseU_CNN:0.45738768;iRNA_PseU:0 12344 chr7 130131221 130131221 1 + A C rs374639127 130131220 + 130131200 130131240 41 CTGACCACGTCGCGCTGCTGTAAAGGAAACCTGCCCCGCGC CTGACCACGTCGCGCTGCTGTCAAGGAAACCTGCCCCGCGC < 41bp 0.806009414475144 0.457349295085015 0.70717627 0.31116292 prediction 0.612018828950288 Functional Loss - MEST ENSG00000106484 UTR5 Human protein_coding chr7:130131220 chr7:130131221 . . 0 22 hPsi_associated_SNPs_6927 0 0 0 0 0 Ribosome 0.438703226962345 0.438730450689872 0.41435254 0 hPsi_site_12344 iPseU_CNN:0.41435254;iRNA_PseU:0 12345 chr19 48517474 48517474 1 + T G UCEC 48517473 + 48517453 48517493 41 TTTCACCTACAAGGGATCTGTTTACTTCACTTGCACCCATA TTTCACCTACAAGGGATCTGTGTACTTCACTTGCACCCATA < 41bp 0.806006241989596 0.488958612621163 0.31702062 0.33156392 prediction 0.612012483979192 Functional Loss - ELSPBP1 ENSG00000169393 CDS Human protein_coding chr19:48517473 chr19:48517474 synonymous SNV . 0 22 hPsi_associated_SNPs_6928 0 0 0 0 2 unknown 0.43871813904056 0.438579493169043 0 0 hPsi_site_12345 iPseU_CNN:0;iRNA_PseU:0 12346 chr16 27353484 27353484 1 + A G UCEC 27353483 + 27353463 27353503 41 AGCCCACCTGCGTCTCCGACTACATGAGCATCTCTACTTGC AGCCCACCTGCGTCTCCGACTGCATGAGCATCTCTACTTGC < 41bp 0.806001781269644 0.374022109789407 0.2999803 0.27282175 prediction 0.612003562539288 Functional Loss - IL4R ENSG00000077238 CDS Human protein_coding chr16:27353483 chr16:27353484 nonsynonymous SNV 0.433 3 22 hPsi_associated_SNPs_6929 0 0 1 0 2 Endoplasmic reticulum 0.438729850961751 0.439186662130909 0 0 hPsi_site_12346 iPseU_CNN:0;iRNA_PseU:0 12347 chr11 64024120 64024120 1 + A G SKCM 64024119 + 64024099 64024139 41 CCATGGAGGGCTTTAGCCGCTACCTGGGAGGCGAGGAGAAT CCATGGAGGGCTTTAGCCGCTGCCTGGGAGGCGAGGAGAAT < 41bp 0.805974109609709 0.371917995293741 0.5417315 0.31694388 prediction 0.611948219219417 Functional Loss - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64024119 chr11:64024120 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6930 0 0 1 0 1 Ribosome 0.438691281775706 0.438718506028015 0.0834630000000001 0 hPsi_site_12347 iPseU_CNN:0.0834630000000001;iRNA_PseU:0 12348 chr7 158727181 158727181 1 + A C COAD 158727180 + 158727160 158727200 41 TTCAAACCTCAGCAACATGGTATAAGACCAGTGAAAGTTAA TTCAAACCTCAGCAACATGGTCTAAGACCAGTGAAAGTTAA < 41bp 0.805962522285894 0.431867455213212 0.6651257 0.26247066 prediction 0.611925044571789 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158727180 chr7:158727181 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6931 0 0 0 0 1 Nucleus 0.43871859445467 0.438718516318323 0.3302514 0 hPsi_site_12348 iPseU_CNN:0.3302514;iRNA_PseU:0 12349 chr14 39722391 39722391 1 + A G UCEC 39722390 + 39722370 39722410 41 GAAAGGGTAAGTTTGCCTTTTAAACCTTTTGCAATAATTTT GAAAGGGTAAGTTTGCCTTTTGAACCTTTTGCAATAATTTT < 41bp 0.805957442816208 0.419104525197004 0.3405814 0.19986811 prediction 0.611914885632415 Functional Loss - MIA2 ENSG00000150526 CDS Human protein_coding chr14:39722390 chr14:39722391 nonsynonymous SNV 0.666 1 22 hPsi_associated_SNPs_6932 0 0 0 0 0 cytosol 0.43867597186253 0.438121819332645 0 0 hPsi_site_12349 iPseU_CNN:0;iRNA_PseU:0 12350 chr2 74652205 74652205 1 + T G UCEC 74652204 + 74652184 74652224 41 TGGGTGTCACCCTTGCAGAGTTCCGTGCCCCTCTGTGCAGC TGGGTGTCACCCTTGCAGAGTGCCGTGCCCCTCTGTGCAGC < 41bp 0.851729288446368 0.545799866178375 0.7298675 0.34579685 prediction 0.611858844535986 Functional Loss - WDR54 ENSG00000005448 CDS Human protein_coding chr2:74652204 chr2:74652205 synonymous SNV . 0 22 hPsi_associated_SNPs_6933 0 0 1 0 0 nucleus 0.438485346988123 0.438101981791473 0.459735 0 hPsi_site_12350 iPseU_CNN:0.459735;iRNA_PseU:0 12351 chr1 70895503 70895503 1 + T G UCEC 70895502 + 70895482 70895522 41 TTTGGCTCTGGGAGCTGATATTTCTATGTATTCTGCAACAA TTTGGCTCTGGGAGCTGATATGTCTATGTATTCTGCAACAA < 41bp 0.842154549089837 0.536231697402705 0.32426113 0.31018567 prediction 0.611845703374264 Functional Loss - CTH ENSG00000116761 CDS Human protein_coding chr1:70895502 chr1:70895503 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_6934 0 0 1 3 2 Cytosol 0.438717659700508 0.441620446280191 0 0 hPsi_site_12351 iPseU_CNN:0;iRNA_PseU:0 12352 chr12 121670288 121670288 1 + T G UCEC 121670287 + 121670267 121670307 41 TCAAGGCCTATGGCATCCGCTTCGACATCATTGTGTTTGGG TCAAGGCCTATGGCATCCGCTGCGACATCATTGTGTTTGGG < 41bp 0.805920459562147 0.466414814983998 0.59179467 0.32325697 prediction 0.611840919124294 Functional Loss - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121670287 chr12:121670288 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6935 0 0 0 0 2 Endoplasmic reticulum 0.438718592416055 0.438718592994978 0.18358934 0 hPsi_site_12352 iPseU_CNN:0.18358934;iRNA_PseU:0 12353 chr19 48908070 48908070 1 + A G LUSC 48908069 + 48908049 48908089 41 TCTTTGAGGTGCTGGAGGAGTATGACTGGACGTCCTTTGTA TCTTTGAGGTGCTGGAGGAGTGTGACTGGACGTCCTTTGTA < 41bp 0.805914674040076 0.379028808874428 0.6713043 0.33635825 prediction 0.611829348080151 Functional Loss - GRIN2D ENSG00000105464 CDS Human protein_coding chr19:48908069 chr19:48908070 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_6936 0 0 1 0 1 chromatin 0.438718444146671 0.438754378655958 0.3426086 0 hPsi_site_12353 iPseU_CNN:0.3426086;iRNA_PseU:0 12354 chr7 44836314 44836314 1 + A G rs6850 44836313 + 44836293 44836333 41 CACCGCCGAGGAAAACCGTGTACTATTAGCCATGGTCAACC CACCGCCGAGGAAAACCGTGTGCTATTAGCCATGGTCAACC < 41bp 0.80591384214479 0.423659128496944 0.9535196 0.45543242 prediction 0.61182768428958 Functional Loss - PPIA ENSG00000196262 UTR5 Human protein_coding chr7:44836313 chr7:44836314 . . 0 22 hPsi_associated_SNPs_6937 0 0 1 0 1 Ribosome 0.438718592986613 0.438718578432418 0.9070392 0 hPsi_site_12354 iPseU_CNN:0.9070392;iRNA_PseU:0 12355 chr14 105965462 105965462 1 + A G rs112912693 105965461 + 105965441 105965481 41 CCGGATCCCAGGCCTGTGGCTAGCAGCACTGGGGACAGGAA CCGGATCCCAGGCCTGTGGCTGGCAGCACTGGGGACAGGAA < 41bp 0.805899730561264 0.429773654409005 0.2589422 0.19654694 prediction 0.611799461122528 Functional Loss - C14orf80 ENSG00000185347 UTR3 Human protein_coding chr14:105965461 chr14:105965462 . . 0 22 hPsi_associated_SNPs_6938 0 0 1 0 0 Ribosome 0.438718577293239 0.438718555152329 0 0 hPsi_site_12355 iPseU_CNN:0;iRNA_PseU:0 12356 chr5 34821857 34821857 1 + A G BLCA 34821856 + 34821836 34821876 41 GGTGCTGATAGCTTATTGGATATAAGTTCTGAAGCTGACCA GGTGCTGATAGCTTATTGGATGTAAGTTCTGAAGCTGACCA < 41bp 0.805896040783964 0.397239419420664 0.5374079 0.3370354 prediction 0.611792081567927 Functional Loss - RAI14 ENSG00000039560 CDS Human protein_coding chr5:34821856 chr5:34821857 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6939 0 0 0 0 1 Cytosol 0.43871738671687 0.438636022989655 0.0748158000000001 0 hPsi_site_12356 iPseU_CNN:0.0748158000000001;iRNA_PseU:0 12357 chr17 79612397 79612397 1 + A G rs6420484 79612396 + 79612376 79612416 41 GCGCAGTGAGCCTGGCTGGCTACCTGGGCGCCCTCTGTGAG GCGCAGTGAGCCTGGCTGGCTGCCTGGGCGCCCTCTGTGAG < 41bp 0.805880434687927 0.41328497078414 0.8997263 0.55318445 prediction 0.611760869375853 Functional Loss - TSPAN10 ENSG00000182612 CDS Human protein_coding chr17:79612396 chr17:79612397 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_6940 0 1 0 0 0 nucleoplasm 0.438562484151156 0.438683744175835 0.6930837 0 hPsi_site_12357 iPseU_CNN:0.6930837;iRNA_PseU:0 12358 chr19 3750622 3750622 1 + A C rs1046271 3750621 + 3750601 3750641 41 GAAGAAAAAGTTTATGCGAGTACATGATGCGGAGTCCTCCG GAAGAAAAAGTTTATGCGAGTCCATGATGCGGAGTCCTCCG < 41bp 0.877328046287239 0.571476110144839 0.6596988 0.25175852 prediction 0.611703872284799 Functional Loss - TJP3 ENSG00000105289 CDS Human protein_coding chr19:3750621 chr19:3750622 synonymous SNV . 0 22 hPsi_associated_SNPs_6941 0 0 0 0 1 Ribosome 0.4387184988599 0.43871871655772 0.3193976 0 hPsi_site_12358 iPseU_CNN:0.3193976;iRNA_PseU:0 12359 chr12 50232575 50232575 1 + A C COAD 50232576 - 50232556 50232596 41 TGAGCTCTTTCTTAAGCCAATTTGGACGTTCAGTTTTTGAC TGAGCTCTTTCTTAAGCCAATGTGGACGTTCAGTTTTTGAC < 41bp 0.833976020365229 0.528133554943206 0.24819201 0.21126461 prediction 0.611684930844045 Functional Loss - BCDIN3D ENSG00000186666 CDS Human protein_coding chr12:50232576 chr12:50232575 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_6942 0 0 0 0 0 Ribosome 0.438717774662323 0.438717467397763 0 0 hPsi_site_12359 iPseU_CNN:0;iRNA_PseU:0 12360 chr3 23958481 23958481 1 + T C rs34391207 23958482 - 23958462 23958502 41 GAGTGGGGCGCCGCGGCCGCTATTGTCCCGCCCCCTGCTCC GAGTGGGGCGCCGCGGCCGCTGTTGTCCCGCCCCCTGCTCC < 41bp 0.89714242089623 0.591311047678712 0.7687394 0.5071358 prediction 0.611662746435036 Functional Loss - NKIRAS1;RPL15 ENSG00000174748;ENSG00000197885 UTR5 Human other chr3:23958482 chr3:23958481 . . 0 22 hPsi_associated_SNPs_6943 0 0 1 0 0 unknown 0.437444362414136 0.438495729422424 0.5232072 0 hPsi_site_12360 iPseU_CNN:0.5232072;iRNA_PseU:0 12361 chr14 56234301 56234301 1 + A G rs79202078 56234300 + 56234280 56234320 41 TATATTAGTCCAGAGGGTATTATATTAGCCCAGGCAAGAAC TATATTAGTCCAGAGGGTATTGTATTAGCCCAGGCAAGAAC < 41bp 0.805827977395858 0.444016876658018 0.32012898 0.15857482 prediction 0.611655954791716 Functional Loss - RPL13AP3 ENSG00000177350 ncRNA_exonic Human transcribed_processed_pseudogene chr14:56234300 chr14:56234301 . . 0 22 hPsi_associated_SNPs_6944 0 0 0 2 0 unknown 0.438718534145882 0.438719280544809 0 0 hPsi_site_12361 iPseU_CNN:0;iRNA_PseU:0 12362 chr4 56291565 56291565 1 + T G rs149833286 56291564 + 56291544 56291584 41 GACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATTTT GACAATCATAGGAGGCATCGTGTTTTTGGCGTTTGCATTTT < 41bp 0.805824995162422 0.477652673843481 0.33268458 0.19738227 prediction 0.611649990324843 Functional Loss - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56291564 chr4:56291565 synonymous SNV . 0 22 hPsi_associated_SNPs_6945 0 0 1 0 1 Ribosome 0.438718592982567 0.43871859224027 0 0 hPsi_site_12362 iPseU_CNN:0;iRNA_PseU:0 12363 chr14 89291129 89291129 1 + A G UCEC 89291128 + 89291108 89291148 41 GTTCCAGCTCTGCGCCGATCTATGCACGCAGATGCTGGAGA GTTCCAGCTCTGCGCCGATCTGTGCACGCAGATGCTGGAGA < 41bp 0.805822225155477 0.395845756460897 0.5673626 0.298016 prediction 0.611644450310955 Functional Loss - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89291128 chr14:89291129 synonymous SNV . 0 22 hPsi_associated_SNPs_6946 0 0 1 2 1 Nucleus 0.43843235862525 0.438991357879905 0.1347252 0 hPsi_site_12363 iPseU_CNN:0.1347252;iRNA_PseU:0 12364 chr3 148744242 148744242 1 + T G UCEC 148744241 + 148744221 148744261 41 CTAATGAACTGTTTGCAGCTTTCAGACTTGGTCTATACACT CTAATGAACTGTTTGCAGCTTGCAGACTTGGTCTATACACT < 41bp 0.805816288478216 0.47879573778403 0.5102191 0.27399433 prediction 0.611632576956432 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148744241 chr3:148744242 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_6947 0 0 1 0 2 Cytosol 0.441791300196339 0.430394852443474 0.0204382000000001 0 hPsi_site_12364 iPseU_CNN:0.0204382000000001;iRNA_PseU:0 12365 chr15 22369097 22369097 1 + A G LUSC 22369096 + 22369076 22369116 41 TTTCTGTGGGCCCAATGAGTTAGACAGTTACTTCTGTGACA TTTCTGTGGGCCCAATGAGTTGGACAGTTACTTCTGTGACA < 41bp 0.805814683417179 0.400232001305583 0.27568892 0.18394157 prediction 0.611629366834358 Functional Loss - OR4M2 ENSG00000182974 CDS Human protein_coding chr15:22369096 chr15:22369097 synonymous SNV . 0 22 hPsi_associated_SNPs_6948 0 0 0 0 0 unknown 0.438646938520643 0.438703991460955 0 0 hPsi_site_12365 iPseU_CNN:0;iRNA_PseU:0 12366 chr2 223423303 223423303 1 + T G UCEC 223423302 + 223423282 223423322 41 ATAGGATTCTGGATCAACCATTTCTTCCAGCTTGTATCCAA ATAGGATTCTGGATCAACCATGTCTTCCAGCTTGTATCCAA < 41bp 0.837052433657912 0.531254463725151 0.6671936 0.37917644 prediction 0.611595939865522 Functional Loss - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423302 chr2:223423303 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_6949 0 0 1 0 0 Ribosome 0.438793746985056 0.437506536107501 0.3343872 0 hPsi_site_12366 iPseU_CNN:0.3343872;iRNA_PseU:0 12367 chr2 201507445 201507445 1 + T G UCEC 201507444 + 201507424 201507464 41 CCAACACAGCTTTTCGTGGGTTTGGCTTTCCTCAGGCAGCG CCAACACAGCTTTTCGTGGGTGTGGCTTTCCTCAGGCAGCG < 41bp 0.858488120867242 0.552694229444275 0.8001796 0.33889824 prediction 0.611587782845936 Functional Loss - AOX1 ENSG00000138356 CDS Human protein_coding chr2:201507444 chr2:201507445 nonsynonymous SNV 0.867 4 22 hPsi_associated_SNPs_6950 0 0 0 0 1 Endoplasmic reticulum 0.438718589480868 0.438721440628645 0.6003592 0 hPsi_site_12367 iPseU_CNN:0.6003592;iRNA_PseU:0 12368 chr17 40716755 40716755 1 + A G LUAD 40716754 + 40716734 40716774 41 CAGAGCTCCCCACATGTCTCTATGTAATTGGGCTGACTGGC CAGAGCTCCCCACATGTCTCTGTGTAATTGGGCTGACTGGC < 41bp 0.805787580641619 0.361785979654685 0.3418399 0.27717173 prediction 0.611575161283237 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40716754 chr17:40716755 nonsynonymous SNV 0.837 4 22 hPsi_associated_SNPs_6951 0 0 1 0 1 Ribosome 0.439103271430964 0.438386733632886 0 0 hPsi_site_12368 iPseU_CNN:0;iRNA_PseU:0 12369 chr7 107389393 107389393 1 + A G LUSC 107389392 + 107389372 107389412 41 GATGTTCGCAGACGAATTCCTATAAAGCTCATCTCCAAACA GATGTTCGCAGACGAATTCCTGTAAAGCTCATCTCCAAACA < 41bp 0.868090138360515 0.562314288629507 0.6739969 0.272685 prediction 0.611551699462014 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107389392 chr7:107389393 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6952 0 0 1 0 2 cytosol 0.438566382546005 0.436367687389975 0.3479938 0 hPsi_site_12369 iPseU_CNN:0.3479938;iRNA_PseU:0 12370 chr22 31655955 31655955 1 + A G LUAD 31655954 + 31655934 31655974 41 CTGTTCAGGAGCAGCTGCCCTACTCTGTCACGCTCATCTCC CTGTTCAGGAGCAGCTGCCCTGCTCTGTCACGCTCATCTCC < 41bp 0.805773768077728 0.374106749790882 0.7538078 0.3291039 prediction 0.611547536155457 Functional Loss - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31655954 chr22:31655955 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6953 0 0 1 0 1 Cytosol 0.438478234903407 0.4387502599795 0.5076156 0 hPsi_site_12370 iPseU_CNN:0.5076156;iRNA_PseU:0 12371 chr18 2579004 2579004 1 + A G ESCA 2579003 + 2578983 2579023 41 GCCTCACATTGTGGCAGCCTTAGTTTGGCTAATAGACTGCA GCCTCACATTGTGGCAGCCTTGGTTTGGCTAATAGACTGCA < 41bp 0.805761751876119 0.392202206744532 0.6416561 0.43161482 prediction 0.611523503752237 Functional Loss - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2579003 chr18:2579004 synonymous SNV . 0 22 hPsi_associated_SNPs_6954 0 0 1 0 2 Cytosol 0.433335848043262 0.440786910485056 0.2833122 0 hPsi_site_12371 iPseU_CNN:0.2833122;iRNA_PseU:0 12372 chr1 173457601 173457601 1 + A G rs36005931 173457600 + 173457580 173457620 41 AAAAAAGCTTTTTAATTCTATACCTTCCTAGTAGATAAGTG AAAAAAGCTTTTTAATTCTATGCCTTCCTAGTAGATAAGTG < 41bp 0.805761338845586 0.448918030122765 0.30001566 0.23007283 prediction 0.611522677691173 Functional Loss - PRDX6 ENSG00000117592 UTR3 Human protein_coding chr1:173457600 chr1:173457601 . . 0 22 hPsi_associated_SNPs_6955 0 0 1 0 0 Ribosome 0.427163025736409 0.432357417883173 0 0 hPsi_site_12372 iPseU_CNN:0;iRNA_PseU:0 12373 chr7 12728378 12728378 1 + A G LUAD 12728377 + 12728357 12728397 41 ACTCCTTGGCATTTGCAGCCTACCTGTGCAATCATAGGAGA ACTCCTTGGCATTTGCAGCCTGCCTGTGCAATCATAGGAGA < 41bp 0.805750219877189 0.400083278335799 0.33975574 0.24558547 prediction 0.611500439754377 Functional Loss - ARL4A ENSG00000122644 CDS Human protein_coding chr7:12728377 chr7:12728378 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_6956 0 0 0 0 0 Cytosol 0.438711809098959 0.438719918603004 0 0 hPsi_site_12373 iPseU_CNN:0;iRNA_PseU:0 12374 chr6 47649005 47649005 1 + A G LIHC 47649004 + 47648984 47649024 41 TGGTTCTTCATTGGCAGAGTTACAGCACCATAGCCAACCAC TGGTTCTTCATTGGCAGAGTTGCAGCACCATAGCCAACCAC < 41bp 0.805745545311124 0.390541700952592 0.7197311 0.5055051 prediction 0.611491090622249 Functional Loss - ADGRF2 ENSG00000164393 CDS Human protein_coding chr6:47649004 chr6:47649005 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_6957 0 0 0 0 0 exosome 0.438727351552934 0.438718544942094 0.428452 0 hPsi_site_12374 iPseU_CNN:0.428452;iRNA_PseU:0 12375 chr20 30681805 30681805 1 + A G UCEC 30681804 + 30681784 30681824 41 GGGTCATTGAGGACAACGAGTACACGGCTCGGGAAGGTAGG GGGTCATTGAGGACAACGAGTGCACGGCTCGGGAAGGTAGG < 41bp 0.805722559497795 0.375839202157255 0.34853226 0.14992335 prediction 0.611445118995589 Functional Loss - HCK ENSG00000101336 CDS Human protein_coding chr20:30681804 chr20:30681805 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_6958 0 0 0 0 1 Nucleus 0.438718664857148 0.438718571844628 0 0 hPsi_site_12375 iPseU_CNN:0;iRNA_PseU:0 12376 chr19 50187307 50187307 1 + A G COAD 50187306 + 50187286 50187326 41 CCATGCTCAACACCGTGCTCTATGCCCGGGACAAGTGGCTG CCATGCTCAACACCGTGCTCTGTGCCCGGGACAAGTGGCTG < 41bp 0.805716365951566 0.365334702653918 0.76982236 0.59530634 prediction 0.611432731903131 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50187306 chr19:50187307 nonsynonymous SNV 0.098 4 22 hPsi_associated_SNPs_6959 0 0 1 0 1 Cytosol 0.438718659793388 0.438718743937544 0.34903204 0 hPsi_site_12376 iPseU_CNN:0.34903204;iRNA_PseU:0 12377 chr3 39137896 39137896 1 + A G rs150788558 39137895 + 39137875 39137915 41 ATGGCAAAGAAAAAAAAAATTATTTACCAGCCCTCAGTTGT ATGGCAAAGAAAAAAAAAATTGTTTACCAGCCCTCAGTTGT < 41bp 0.805710532726975 0.438321963862199 0.32345068 0.2552589 prediction 0.611421065453951 Functional Loss - WDR48 ENSG00000114742 UTR3 Human protein_coding chr3:39137895 chr3:39137896 . . 0 22 hPsi_associated_SNPs_6960 0 0 1 0 0 Ribosome 0.438716276402297 0.438719121570645 0 0 hPsi_site_12377 iPseU_CNN:0;iRNA_PseU:0 12378 chr4 71347208 71347208 1 + A G LUSC 71347207 + 71347187 71347227 41 TGCAACTACACCAGCTCCACTATCTTCCTCAGCTCCACCAG TGCAACTACACCAGCTCCACTGTCTTCCTCAGCTCCACCAG < 41bp 0.805706454218954 0.387244382743642 0.43172705 0.277421 prediction 0.611412908437907 Functional Loss - MUC7 ENSG00000171195 CDS Human protein_coding chr4:71347207 chr4:71347208 synonymous SNV . 0 22 hPsi_associated_SNPs_6961 0 0 0 0 0 unknown 0.438673946982471 0.438739620262495 0 0 hPsi_site_12378 iPseU_CNN:0;iRNA_PseU:0 12379 chr4 4304774 4304774 1 + T G LUAD 4304773 + 4304753 4304793 41 GTGAATTATGCGGGAAACCTTTTAAACACCCAAGCAACTTG GTGAATTATGCGGGAAACCTTGTAAACACCCAAGCAACTTG < 41bp 0.805697947109675 0.481522914538455 0.91026366 0.6925765 prediction 0.61139589421935 Functional Loss - ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4304773 chr4:4304774 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6962 0 0 0 6 1 nucleoplasm 0.438718592955464 0.438718601600406 0.43537432 0 hPsi_site_12379 iPseU_CNN:0.43537432;iRNA_PseU:0 12380 chr17 7606100 7606100 1 + T G SKCM 7606099 + 7606079 7606119 41 TGGGATCTCCGGCAGTCTGGTTACCCACTGTGGTCCCTGGG TGGGATCTCCGGCAGTCTGGTGACCCACTGTGGTCCCTGGG < 41bp 0.805694698184301 0.472349412050136 0.687821 0.4830737 prediction 0.611389396368601 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606099 chr17:7606100 nonsynonymous SNV 0.605 0 22 hPsi_associated_SNPs_6963 0 0 1 0 2 Ribosome 0.438718592995102 0.438718593099444 0.375642 0 hPsi_site_12380 iPseU_CNN:0.375642;iRNA_PseU:0 12381 chr1 1559304 1559304 1 + A G UCEC 1559303 + 1559283 1559323 41 TCGCCCACGCCTTCGACCGCTACGAGACCGCTCACTCGCGC TCGCCCACGCCTTCGACCGCTGCGAGACCGCTCACTCGCGC < 41bp 0.903004689521551 0.597315742018185 0.972125 0.7550248 prediction 0.611377895006733 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1559303 chr1:1559304 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_6964 0 0 0 0 1 Ribosome 0.437906316952769 0.438805861521714 0.4342004 0 hPsi_site_12381 iPseU_CNN:0.4342004;iRNA_PseU:0 12382 chrX 48564750 48564750 1 + A G OV 48564749 + 48564729 48564769 41 TGGACTACGTGGAGGACGTGTACACCGTGGATGCCGCCTAC TGGACTACGTGGAGGACGTGTGCACCGTGGATGCCGCCTAC < 41bp 0.805675371774641 0.375250088061071 0.6484486 0.35218644 prediction 0.611350743549282 Functional Loss - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564749 chrX:48564750 nonsynonymous SNV 0.250 4 22 hPsi_associated_SNPs_6965 0 0 1 0 1 Ribosome 0.438757103345139 0.438771246852867 0.2968972 0 hPsi_site_12382 iPseU_CNN:0.2968972;iRNA_PseU:0 12383 chr6 42147004 42147004 1 + A G UCEC 42147003 + 42146983 42147023 41 GAACTCTCCCTGGAAGAGTTTATAGAGGGCGTCCAGAAGGA GAACTCTCCCTGGAAGAGTTTGTAGAGGGCGTCCAGAAGGA < 41bp 0.908720915655281 0.603066821206188 0.75594616 0.41399422 prediction 0.611308188898186 Functional Loss - GUCA1A ENSG00000048545 CDS Human protein_coding chr6:42147003 chr6:42147004 nonsynonymous SNV 0.846 0 22 hPsi_associated_SNPs_6966 0 0 0 0 1 Cytosol 0.438722616620941 0.438723716814566 0.51189232 0 hPsi_site_12383 iPseU_CNN:0.51189232;iRNA_PseU:0 12384 chr10 12139894 12139894 1 + A G COAD 12139893 + 12139873 12139913 41 GCGCAAATCACCACCTGGAGTACAGGTGTGCCCCTCGACCT GCGCAAATCACCACCTGGAGTGCAGGTGTGCCCCTCGACCT < 41bp 0.805645620272294 0.365659171956147 0.3855863 0.33620512 prediction 0.611291240544589 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12139893 chr10:12139894 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_6967 0 0 1 0 0 Endoplasmic reticulum 0.438718549962206 0.438718592153715 0 0 hPsi_site_12384 iPseU_CNN:0;iRNA_PseU:0 12385 chr11 57947275 57947275 1 + A G BLCA 57947274 + 57947254 57947294 41 ACCTCTTGGCCCTCATGGCCTATGACCGCTACTTGGCTGTG ACCTCTTGGCCCTCATGGCCTGTGACCGCTACTTGGCTGTG < 41bp 0.805643686068631 0.379037939398594 0.46559253 0.22798616 prediction 0.611287372137262 Functional Loss - OR9Q1 ENSG00000186509 CDS Human protein_coding chr11:57947274 chr11:57947275 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_6968 0 0 0 0 0 nucleus 0.438718592979375 0.438718592554118 0 0 hPsi_site_12385 iPseU_CNN:0;iRNA_PseU:0 12386 chr12 107236563 107236563 1 + T G UCEC 107236562 + 107236542 107236582 41 AATATGGAGGCCATTCATGTTTTACTGAATTTTATGGAGAA AATATGGAGGCCATTCATGTTGTACTGAATTTTATGGAGAA < 41bp 0.805612885798082 0.489927095688285 0.3604995 0.28479797 prediction 0.611225771596164 Functional Loss - RIC8B ENSG00000111785 CDS Human protein_coding chr12:107236562 chr12:107236563 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6969 0 0 0 0 1 Nucleus 0.438718592994238 0.438718592921472 0 0 hPsi_site_12386 iPseU_CNN:0;iRNA_PseU:0 12387 chr19 3612009 3612009 1 + T C STAD 3612010 - 3611990 3612030 41 TCGTCAACCGCGAGTGGGAATACTCGCACCGCCACGGCTTC TCGTCAACCGCGAGTGGGAATGCTCGCACCGCCACGGCTTC < 41bp 0.904622904819764 0.599020086103696 0.75123596 0.3479709 prediction 0.611205637432135 Functional Loss - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612010 chr19:3612009 nonsynonymous SNV 0.723 3 22 hPsi_associated_SNPs_6970 0 0 1 0 0 Ribosome 0.438791344391647 0.438724559694398 0.50247192 0 hPsi_site_12387 iPseU_CNN:0.50247192;iRNA_PseU:0 12388 chr9 100839239 100839239 1 + T G UCEC 100839238 + 100839218 100839258 41 CATGAACTGAATGTTCCATTTTTCAAAGTTGGATCTGGAGA CATGAACTGAATGTTCCATTTGTCAAAGTTGGATCTGGAGA < 41bp 0.805599899733755 0.498605989156601 0.25082505 0.21615312 prediction 0.611199799467509 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100839238 chr9:100839239 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6971 0 0 1 0 2 Ribosome 0.447386489075018 0.438654301830995 0 0 hPsi_site_12388 iPseU_CNN:0;iRNA_PseU:0 12389 chr7 80300352 80300352 1 + T G UCEC 80300351 + 80300331 80300371 41 AAGGAATCCCTGTGTATAGATTTGTTCTTCCATCCAAGGCC AAGGAATCCCTGTGTATAGATGTGTTCTTCCATCCAAGGCC < 41bp 0.835993153249022 0.530408756936346 0.45342356 0.3162998 prediction 0.61116879262535 Functional Loss - CD36 ENSG00000135218 CDS Human protein_coding chr7:80300351 chr7:80300352 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6972 0 0 0 0 1 Nucleus 0.438718592896516 0.438925193896208 0 0 hPsi_site_12389 iPseU_CNN:0;iRNA_PseU:0 12390 chrX 115582675 115582675 1 + A G rs61910752 115582674 + 115582654 115582694 41 TTGGGGTGGCTTAGTTGCTCTATCATCTTACAATAAGTTCA TTGGGGTGGCTTAGTTGCTCTGTCATCTTACAATAAGTTCA < 41bp 0.805568397651331 0.386013426530828 0.45270714 0.25165343 prediction 0.611136795302661 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115582674 chrX:115582675 synonymous SNV . 0 22 hPsi_associated_SNPs_6973 0 0 1 0 1 cytosol 0.438720579670499 0.43871761265422 0 0 hPsi_site_12390 iPseU_CNN:0;iRNA_PseU:0 12391 chr17 61557773 61557773 1 + A C rs3730025 61557772 + 61557752 61557792 41 AGGACGATCTGGAACACCTCTACCAACAGCTAGAGCCCCTC AGGACGATCTGGAACACCTCTCCCAACAGCTAGAGCCCCTC < 41bp 0.805532834749734 0.422555890812602 0.35721567 0.25295678 prediction 0.611065669499469 Functional Loss - ACE ENSG00000159640 CDS Human protein_coding chr17:61557772 chr17:61557773 nonsynonymous SNV 0.179 4 22 hPsi_associated_SNPs_6974 0 0 0 0 1 cytosol 0.438635588551256 0.438723521763846 0 0 hPsi_site_12391 iPseU_CNN:0;iRNA_PseU:0 12392 chr15 59499534 59499534 1 + A G UCEC 59499533 + 59499513 59499553 41 ATATTGTTTGTAGCAAAGATTACTTTGTCACAGCAAACTCC ATATTGTTTGTAGCAAAGATTGCTTTGTCACAGCAAACTCC < 41bp 0.899681776009237 0.594157254815713 0.27631223 0.2357263 prediction 0.611049042387048 Functional Loss - LDHAL6B ENSG00000171989 CDS Human protein_coding chr15:59499533 chr15:59499534 nonsynonymous SNV 0.149 2 22 hPsi_associated_SNPs_6975 0 0 0 0 0 unknown 0.441938517198267 0.438887108829695 0 0 hPsi_site_12392 iPseU_CNN:0;iRNA_PseU:0 12393 chr12 1889767 1889767 1 + A G PRAD 1889766 + 1889746 1889786 41 CATGGCTCTTCCACACAGTCTACTGCCACTCAGAGGGGGTC CATGGCTCTTCCACACAGTCTGCTGCCACTCAGAGGGGGTC < 41bp 0.805520803965594 0.377599534194527 0.20457464 0.13902432 prediction 0.611041607931188 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1889766 chr12:1889767 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_6976 0 0 1 0 1 chromatin 0.438680412804202 0.438834455117039 0 0 hPsi_site_12393 iPseU_CNN:0;iRNA_PseU:0 12394 chr5 52096478 52096478 1 + A G STAD 52096477 + 52096457 52096497 41 CAAGCCTGCCAGCTGCGGGTTAAGGGGACCAACATCCAAGA CAAGCCTGCCAGCTGCGGGTTGAGGGGACCAACATCCAAGA < 41bp 0.805517406282681 0.383649254735606 0.8376217 0.33686516 prediction 0.611034812565362 Functional Loss - PELO ENSG00000152684 CDS Human protein_coding chr5:52096477 chr5:52096478 nonsynonymous SNV 0.964 1 22 hPsi_associated_SNPs_6977 0 0 1 0 0 Ribosome 0.438634126201565 0.440775046914469 0.6752434 0 hPsi_site_12394 iPseU_CNN:0.6752434;iRNA_PseU:0 12395 chr14 68035903 68035903 1 + A G rs17104428 68035902 + 68035882 68035922 41 TCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATAC TCGGGCATGCGGCTCTCAGATGTGTCTCCCAGAAGTAATAC < 41bp 0.805505747577833 0.372323992278108 0.3467427 0.23858681 prediction 0.611011495155666 Functional Loss - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68035902 chr14:68035903 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_6978 0 0 1 0 2 Endoplasmic reticulum 0.438719488279278 0.438724984638115 0 0 hPsi_site_12395 iPseU_CNN:0;iRNA_PseU:0 12396 chr2 111881609 111881609 1 + A G UCEC 111881608 + 111881588 111881628 41 TGTCTCGATCCTCCAGTGGGTATTTCTCTTTTGACACAGAC TGTCTCGATCCTCCAGTGGGTGTTTCTCTTTTGACACAGAC < 41bp 0.888058148022602 0.582579176311461 0.58136255 0.27394795 prediction 0.610957943422282 Functional Loss - BCL2L11 ENSG00000153094 CDS Human protein_coding chr2:111881608 chr2:111881609 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6979 0 0 1 0 0 Nucleus 0.436694396875602 0.435379836937689 0.1627251 0 hPsi_site_12396 iPseU_CNN:0.1627251;iRNA_PseU:0 12397 chr17 65924567 65924567 1 + A G UCEC 65924566 + 65924546 65924586 41 ATCTCTCCAGCACAGAAGGTTATGGTGGCCCCCATAAGTGG ATCTCTCCAGCACAGAAGGTTGTGGTGGCCCCCATAAGTGG < 41bp 0.805478851336205 0.385721838051764 0.6376588 0.5581833 prediction 0.61095770267241 Functional Loss - BPTF ENSG00000171634 CDS Human protein_coding chr17:65924566 chr17:65924567 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_6980 0 0 1 0 1 Cytosol 0.43871738833062 0.438718462434624 0.158951 0 hPsi_site_12397 iPseU_CNN:0.158951;iRNA_PseU:0 12398 chr17 72832618 72832618 1 + A G CESC 72832617 + 72832597 72832637 41 TGGTGGGCATCACAGGGGCCTACGCGGGCACCGGCATCCAG TGGTGGGCATCACAGGGGCCTGCGCGGGCACCGGCATCCAG < 41bp 0.805421357254555 0.381431988468834 0.6524813 0.21463525 prediction 0.61084271450911 Functional Loss - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72832617 chr17:72832618 nonsynonymous SNV 0.921 4 22 hPsi_associated_SNPs_6981 0 0 1 0 0 Endoplasmic reticulum 0.435787339034153 0.438662420819931 0.3049626 0 hPsi_site_12398 iPseU_CNN:0.3049626;iRNA_PseU:0 12399 chr7 933445 933445 1 + A G UCEC 933444 + 933424 933464 41 CCCTCCGGCGGGACCCCATGTACAACGAGGTGAGAGCTTGG CCCTCCGGCGGGACCCCATGTGCAACGAGGTGAGAGCTTGG < 41bp 0.805414533362769 0.383209953692428 0.68572605 0.29166526 prediction 0.610829066725539 Functional Loss - GET4 ENSG00000239857 CDS Human protein_coding chr7:933444 chr7:933445 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6982 0 0 1 0 2 Cytosol 0.43872017081218 0.438718995895166 0.3714521 0 hPsi_site_12399 iPseU_CNN:0.3714521;iRNA_PseU:0 12400 chrX 128725786 128725786 1 + A C rs187292243 128725785 + 128725765 128725805 41 TAAAGCAATAGGAGTCAAGTTACTGGTGCCACAGATCTGGA TAAAGCAATAGGAGTCAAGTTCCTGGTGCCACAGATCTGGA < 41bp 0.805364621959399 0.457972437087744 0.68576264 0.22774512 prediction 0.610729243918797 Functional Loss - OCRL ENSG00000122126 UTR3 Human protein_coding chrX:128725785 chrX:128725786 . . 0 22 hPsi_associated_SNPs_6983 0 0 1 0 0 Cytosol 0.430972620960003 0.436476245432316 0.37152528 0 hPsi_site_12400 iPseU_CNN:0.37152528;iRNA_PseU:0 12401 chr19 49632230 49632230 1 + A G rs35298280 49632229 + 49632209 49632249 41 GGTAGAAGTGCTCAAAGCTCTAAAGTCTCTCTTCGAGCACC GGTAGAAGTGCTCAAAGCTCTGAAGTCTCTCTTCGAGCACC < 41bp 0.910260779057685 0.604909078127862 0.6585245 0.42277434 prediction 0.610703401859645 Functional Loss - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49632229 chr19:49632230 synonymous SNV . 0 22 hPsi_associated_SNPs_6984 0 0 1 0 1 Cytosol 0.438742906862687 0.438718633743355 0.317049 0 hPsi_site_12401 iPseU_CNN:0.317049;iRNA_PseU:0 12402 chr4 100756851 100756851 1 + A C DLBC 100756850 + 100756830 100756870 41 CAAATGGATGTGACGGCAGCTACCTTCTGAGGGACAGCAAT CAAATGGATGTGACGGCAGCTCCCTTCTGAGGGACAGCAAT < 41bp 0.87964567553148 0.574304790998005 0.50467426 0.21975493 prediction 0.61068176906695 Functional Loss - DAPP1 ENSG00000070190 CDS Human protein_coding chr4:100756850 chr4:100756851 nonsynonymous SNV 0.958 5 22 hPsi_associated_SNPs_6985 0 0 0 0 2 nucleus 0.438550532258673 0.438701299018997 0.00934852000000008 0 hPsi_site_12402 iPseU_CNN:0.00934852000000008;iRNA_PseU:0 12403 chr6 167754877 167754877 1 + T G COAD 167754876 + 167754856 167754896 41 GGAGAGATGAGTGGGCAGGATTTTCATCTGTCAACAAGGGA GGAGAGATGAGTGGGCAGGATGTTCATCTGTCAACAAGGGA < 41bp 0.806660775415594 0.501325602667264 0.27715862 0.24408603 prediction 0.610670345496661 Functional Loss - TTLL2 ENSG00000120440 CDS Human protein_coding chr6:167754876 chr6:167754877 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_6986 0 0 0 0 0 Exosome 0.438718477155342 0.438468102133033 0 0 hPsi_site_12403 iPseU_CNN:0;iRNA_PseU:0 12404 chr10 43315806 43315806 1 + T G UCEC 43315805 + 43315785 43315825 41 CTGTGAATTTGTGCAGAACTTTGACCCCCATTACCCCATTA CTGTGAATTTGTGCAGAACTTGGACCCCCATTACCCCATTA < 41bp 0.850408225064641 0.545079601056037 0.30582273 0.29093578 prediction 0.610657248017208 Functional Loss - BMS1 ENSG00000165733 CDS Human protein_coding chr10:43315805 chr10:43315806 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_6987 0 0 0 0 1 chromatin 0.438718590221768 0.438718594513563 0 0 hPsi_site_12404 iPseU_CNN:0;iRNA_PseU:0 12405 chr4 158043524 158043524 1 + T G SKCM 158043523 + 158043503 158043543 41 TCAACATTTTTATTAACAGTTTTGGATCCATTCAAGAAACA TCAACATTTTTATTAACAGTTGTGGATCCATTCAAGAAACA < 41bp 0.805256823443894 0.491558370919601 0.5335084 0.31566286 prediction 0.610513646887788 Functional Loss - GLRB ENSG00000109738 CDS Human protein_coding chr4:158043523 chr4:158043524 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_6988 0 0 0 0 2 exosome 0.438718592995102 0.438718592995102 0.0670168 0 hPsi_site_12405 iPseU_CNN:0.0670168;iRNA_PseU:0 12406 chr3 169998045 169998045 1 + T G UCEC 169998044 + 169998024 169998064 41 ACCAGGGAAAGTGGCAAAGCTTCATCCAGTCTAGGTCTTCA ACCAGGGAAAGTGGCAAAGCTGCATCCAGTCTAGGTCTTCA < 41bp 0.805230695991203 0.477318242410444 0.36498415 0.2840007 prediction 0.610461391982407 Functional Loss - PRKCI ENSG00000163558 CDS Human protein_coding chr3:169998044 chr3:169998045 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_6989 0 0 0 0 1 Ribosome 0.438718652340892 0.43871778139841 0 0 hPsi_site_12406 iPseU_CNN:0;iRNA_PseU:0 12407 chr19 13051188 13051188 1 + A G rs534189742 13051187 + 13051167 13051207 41 CTTCCTGCCACCCAAGAAGATAAAGGATCCTGATGCTTCAA CTTCCTGCCACCCAAGAAGATGAAGGATCCTGATGCTTCAA < 41bp 0.805229108034766 0.377615432547934 0.48769045 0.33563417 prediction 0.610458216069532 Functional Loss - CALR ENSG00000179218 CDS Human protein_coding chr19:13051187 chr19:13051188 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_6990 0 0 1 0 1 Ribosome 0.438686580525394 0.438724684464093 0 0 hPsi_site_12407 iPseU_CNN:0;iRNA_PseU:0 12408 chr1 101190382 101190382 1 + T G UCEC 101190381 + 101190361 101190401 41 GAGGATGGAAGATTCTGGAATTTATGTGTGTGAAGGAGTTA GAGGATGGAAGATTCTGGAATGTATGTGTGTGAAGGAGTTA < 41bp 0.805221560986659 0.470846553418443 0.30599874 0.2209383 prediction 0.610443121973318 Functional Loss - VCAM1 ENSG00000162692 CDS Human protein_coding chr1:101190381 chr1:101190382 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_6991 0 0 0 0 1 exosome 0.438718593979085 0.467464975075972 0 0 hPsi_site_12408 iPseU_CNN:0;iRNA_PseU:0 12409 chr14 21238717 21238717 1 + A G CESC 21238716 + 21238696 21238736 41 GGACGGGTATGTTGATAGCATAGAAGACCTAAAGATGGTAG GGACGGGTATGTTGATAGCATGGAAGACCTAAAGATGGTAG < 41bp 0.805193749262648 0.410895640332724 0.32436243 0.26909107 prediction 0.610387498525296 Functional Loss - EDDM3B ENSG00000181552 CDS Human protein_coding chr14:21238716 chr14:21238717 nonsynonymous SNV 0.960 3 22 hPsi_associated_SNPs_6992 0 0 0 0 0 unknown 0.438623902855134 0.438716417177978 0 0 hPsi_site_12409 iPseU_CNN:0;iRNA_PseU:0 12410 chr17 76130591 76130591 1 + T G BLCA 76130590 + 76130570 76130610 41 ACTCAACGGGCTCCTGGTGGTTGGGGCCATCAGCGCCATCT ACTCAACGGGCTCCTGGTGGTGGGGGCCATCAGCGCCATCT < 41bp 0.805190990914679 0.466489443930799 0.2811123 0.21502736 prediction 0.610381981829357 Functional Loss - TMC8 ENSG00000167895 CDS Human protein_coding chr17:76130590 chr17:76130591 synonymous SNV . 0 22 hPsi_associated_SNPs_6993 0 0 1 0 1 chromatin 0.438718555490502 0.438718585352656 0 0 hPsi_site_12410 iPseU_CNN:0;iRNA_PseU:0 12411 chr1 114523794 114523794 1 + A G rs35891262 114523793 + 114523773 114523813 41 CCGGGTGCCCTTCCCCTGGGTAGGCACAGGGCAGCTGGTAT CCGGGTGCCCTTCCCCTGGGTGGGCACAGGGCAGCTGGTAT < 41bp 0.8051784325438 0.367147769918187 0.90782976 0.3016703 prediction 0.610356865087599 Functional Loss - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114523793 chr1:114523794 synonymous SNV . 0 22 hPsi_associated_SNPs_6994 0 0 1 0 0 exosome 0.438718601676745 0.438724272057101 0.81565952 0 hPsi_site_12411 iPseU_CNN:0.81565952;iRNA_PseU:0 12412 chr18 43796439 43796439 1 + A G rs111881084 43796438 + 43796418 43796458 41 AGGCTGCTGCAAGGAAGAAATATAACCTGCTGCAGGACAGT AGGCTGCTGCAAGGAAGAAATGTAACCTGCTGCAGGACAGT < 41bp 0.805176495331182 0.393395479167113 0.26301676 0.24246532 prediction 0.610352990662364 Functional Loss - C18orf25 ENSG00000152242 CDS Human protein_coding chr18:43796438 chr18:43796439 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_6995 0 0 1 0 0 Ribosome 0.43871860348712 0.438718613954388 0 0 hPsi_site_12412 iPseU_CNN:0;iRNA_PseU:0 12413 chrX 64949452 64949452 1 + T G UCEC 64949451 + 64949431 64949471 41 GGGCATTCTCAATGATGATATTTACTGCCCGCCTGAGACCG GGGCATTCTCAATGATGATATGTACTGCCCGCCTGAGACCG < 41bp 0.854804723268278 0.549636300542768 0.34417635 0.39828533 prediction 0.61033684545102 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64949451 chrX:64949452 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_6996 0 0 1 0 0 Ribosome 0.438718474913477 0.438726469137209 0 0 hPsi_site_12413 iPseU_CNN:0;iRNA_PseU:0 12414 chr17 54403675 54403675 1 + A G UCEC 54403674 + 54403654 54403694 41 GAATGAAAGCACTGGACAATTACCAACAACTTGTTCCTCTG GAATGAAAGCACTGGACAATTGCCAACAACTTGTTCCTCTG < 41bp 0.80516078202231 0.403673349617047 0.62089884 0.3328419 prediction 0.61032156404462 Functional Loss - ANKFN1 ENSG00000153930 CDS Human protein_coding chr17:54403674 chr17:54403675 synonymous SNV . 0 22 hPsi_associated_SNPs_6997 0 0 0 0 2 nucleus 0.439169876620106 0.438025602848262 0.24179768 0 hPsi_site_12414 iPseU_CNN:0.24179768;iRNA_PseU:0 12415 chr19 54080878 54080878 1 + A G ACC 54080877 + 54080857 54080897 41 TACATACGGGCGAGAAGCCGTACAAGTGCACAGAATGTGGG TACATACGGGCGAGAAGCCGTGCAAGTGCACAGAATGTGGG < 41bp 0.805152983031717 0.386916572107663 0.5965026 0.30380607 prediction 0.610305966063433 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080877 chr19:54080878 nonsynonymous SNV 0.007 3 22 hPsi_associated_SNPs_6998 0 0 0 0 0 Nucleus 0.438802635514707 0.437792524836074 0.1930052 0 hPsi_site_12415 iPseU_CNN:0.1930052;iRNA_PseU:0 12416 chrX 129546719 129546719 1 + A G UCEC 129546718 + 129546698 129546738 41 GGCGTTCTGAAGGGCGTAGTTATAGAAGTAGAAGTAGGAGC GGCGTTCTGAAGGGCGTAGTTGTAGAAGTAGAAGTAGGAGC < 41bp 0.905855111170047 0.600708566631648 0.6104592 0.31179783 prediction 0.610293089076799 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546718 chrX:129546719 nonsynonymous SNV 0.061 1 22 hPsi_associated_SNPs_6999 0 0 1 0 0 exosome 0.438718370822926 0.438718851130041 0.2209184 0 hPsi_site_12416 iPseU_CNN:0.2209184;iRNA_PseU:0 12417 chr20 30385246 30385246 1 + T C UCEC 30385245 + 30385225 30385265 41 CAGCAGAAAGAAGCAGCTTGTTTCAAGGCTCGTCCAAACAC CAGCAGAAAGAAGCAGCTTGTCTCAAGGCTCGTCCAAACAC < 41bp 0.810048187661838 0.504907066721808 0.88946974 0.685107 prediction 0.610282241880059 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30385245 chr20:30385246 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_7000 0 0 1 0 2 Cytosol 0.439066321741247 0.439514013910404 0.40872548 0 hPsi_site_12417 iPseU_CNN:0.40872548;iRNA_PseU:0 12418 chrX 64719765 64719765 1 + T G UCEC 64719764 + 64719744 64719784 41 CTTGCTTACTTGCTTTCAGATTTATGCCTCCAGATGATCCA CTTGCTTACTTGCTTTCAGATGTATGCCTCCAGATGATCCA < 41bp 0.843914400828716 0.538778050022484 0.8259089 0.51275563 prediction 0.610272701612466 Functional Loss - ZC3H12B ENSG00000102053 CDS Human protein_coding chrX:64719764 chrX:64719765 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7001 0 0 0 0 1 Endoplasmic reticulum 0.438718735965731 0.438675081032823 0.62630654 0 hPsi_site_12418 iPseU_CNN:0.62630654;iRNA_PseU:0 Breast-ovarian cancer, familial 2 Breast-ovarian cancer, familial 2 12419 chr6 28227436 28227436 1 + A G rs12000 28227435 + 28227415 28227455 41 CCTCGTATAGTGGATATCGCTACCATCGTCACTGCTATGCA CCTCGTATAGTGGATATCGCTGCCATCGTCACTGCTATGCA < 41bp 0.899274771328942 0.594153416465609 0.48670137 0.31290826 prediction 0.610242709726665 Functional Loss - NKAPL ENSG00000189134 CDS Human protein_coding chr6:28227435 chr6:28227436 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_7002 0 0 0 0 0 exosome 0.438674518415025 0.438905804534679 0 0 hPsi_site_12419 iPseU_CNN:0;iRNA_PseU:0 12420 chr11 460237 460237 1 + A G HNSC 460236 + 460216 460256 41 TCCTCACCTGTACGCTTGGCTATGTGACGCTGCTGGAGGAA TCCTCACCTGTACGCTTGGCTGTGTGACGCTGCTGGAGGAA < 41bp 0.915935987010105 0.610815092672371 0.2721073 0.26185808 prediction 0.610241788675468 Functional Loss - PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:460236 chr11:460237 nonsynonymous SNV 0.320 3 22 hPsi_associated_SNPs_7003 0 0 1 0 2 Ribosome 0.438705280077548 0.43887434861432 0 0 hPsi_site_12420 iPseU_CNN:0;iRNA_PseU:0 12421 chr7 1028999 1028999 1 + A G rs371837394 1028998 + 1028978 1029018 41 CAAGCCACTGGGGCCATGCGTATGACTGGTGCAGGGAGGCA CAAGCCACTGGGGCCATGCGTGTGACTGGTGCAGGGAGGCA < 41bp 0.877504025155946 0.572384691243433 0.3382313 0.14053163 prediction 0.610238667825025 Functional Loss - CYP2W1 ENSG00000073067 UTR3 Human protein_coding chr7:1028998 chr7:1028999 . . 0 22 hPsi_associated_SNPs_7004 0 0 1 0 0 nucleus 0.43871862751188 0.438718639503724 0 0 hPsi_site_12421 iPseU_CNN:0;iRNA_PseU:0 12422 chr16 70602315 70602315 1 + A G UCEC 70602314 + 70602294 70602334 41 CTTATCATCTTTGCTGATGATACCTACCCCCGATGGGTCAC CTTATCATCTTTGCTGATGATGCCTACCCCCGATGGGTCAC < 41bp 0.805116985112315 0.38724557440877 0.718915 0.29400307 prediction 0.61023397022463 Functional Loss - SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70602314 chr16:70602315 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_7005 0 0 1 0 1 Cytosol 0.438721128430714 0.438718663264127 0.43783 0 hPsi_site_12422 iPseU_CNN:0.43783;iRNA_PseU:0 12423 chr14 23079770 23079770 1 + T G UCEC 23079769 + 23079749 23079789 41 GGTTCTCTCTCCACAGGAGATTAAGGGTGCCTCCCACCATG GGTTCTCTCTCCACAGGAGATGAAGGGTGCCTCCCACCATG < 41bp 0.805096153459075 0.473973396677832 0.34809634 0.22567707 prediction 0.610192306918149 Functional Loss - ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23079769 chr14:23079770 nonsynonymous SNV 0.821 4 22 hPsi_associated_SNPs_7006 0 0 0 0 1 cytosol 0.438735568571232 0.437954678107824 0 0 hPsi_site_12423 iPseU_CNN:0;iRNA_PseU:0 12424 chr19 41257349 41257349 1 + T G GBM 41257348 + 41257328 41257368 41 GACCCGCCCTAACCACACTATTTATATCAACAACCTCAATG GACCCGCCCTAACCACACTATGTATATCAACAACCTCAATG < 41bp 0.814030044233979 0.508948398793312 0.33237088 0.24607372 prediction 0.610163290881334 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41257348 chr19:41257349 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7007 0 0 1 0 1 Ribosome 0.438739456984238 0.438718315120358 0 0 hPsi_site_12424 iPseU_CNN:0;iRNA_PseU:0 12425 chr2 130738417 130738417 1 + T G UCEC 130738416 + 130738396 130738436 41 TTTCCCTTCATTAATAACGTTTTGCAATTCATCATTGCTGC TTTCCCTTCATTAATAACGTTGTGCAATTCATCATTGCTGC < 41bp 0.805016525322035 0.493928148832986 0.23017603 0.23546818 prediction 0.610033050644069 Functional Loss - RAB6C ENSG00000222014 CDS Human protein_coding chr2:130738416 chr2:130738417 nonsynonymous SNV 0.083 1 22 hPsi_associated_SNPs_7008 0 0 0 0 0 exosome 0.438801086986648 0.438080194418952 0 0 hPsi_site_12425 iPseU_CNN:0;iRNA_PseU:0 12426 chr19 2917542 2917542 1 + A G UCEC 2917541 + 2917521 2917561 41 CGCACACGGGAGAGAAGCCCTATGAATGCAAGCAGTGTGGG CGCACACGGGAGAGAAGCCCTGTGAATGCAAGCAGTGTGGG < 41bp 0.804974598808656 0.390661137975764 0.50518507 0.26592025 prediction 0.609949197617313 Functional Loss - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917541 chr19:2917542 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_7009 0 0 0 0 0 nucleoplasm 0.438714100414459 0.438712316048639 0.01037014 0 hPsi_site_12426 iPseU_CNN:0.01037014;iRNA_PseU:0 12427 chr5 102508922 102508922 1 + A C LUAD 102508921 + 102508901 102508941 41 GGCTACTGTACTCCTCTGGTTAGAAAAATTCGCTCAGACCT GGCTACTGTACTCCTCTGGTTCGAAAAATTCGCTCAGACCT < 41bp 0.86552006766762 0.560581632614345 0.4901643 0.33785352 prediction 0.60987687010655 Functional Loss - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102508921 chr5:102508922 synonymous SNV . 0 22 hPsi_associated_SNPs_7010 0 0 1 0 2 Cytosol 0.438718593042209 0.43871936844296 0 0 hPsi_site_12427 iPseU_CNN:0;iRNA_PseU:0 12428 chr17 4837738 4837738 1 + A G KIRP 4837737 + 4837717 4837757 41 CTCCAGCCTCTTCCTGTGGGTACGGCCTAATGGCCGTGTGG CTCCAGCCTCTTCCTGTGGGTGCGGCCTAATGGCCGTGTGG < 41bp 0.908738061800143 0.603802062567831 0.682363 0.21436873 prediction 0.609871998464625 Functional Loss - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4837737 chr17:4837738 synonymous SNV . 0 22 hPsi_associated_SNPs_7011 0 0 0 0 0 exosome 0.438718592955539 0.438718593489963 0.364726 0 hPsi_site_12428 iPseU_CNN:0.364726;iRNA_PseU:0 12429 chr11 47594521 47594521 1 + A C CHOL 47594520 + 47594500 47594540 41 CAAATTGGTAAGCAGCACCTTAATACCTCTTGTGACAGTTA CAAATTGGTAAGCAGCACCTTCATACCTCTTGTGACAGTTA < 41bp 0.84787383051216 0.542941677580352 0.3787959 0.29768306 prediction 0.609864305863617 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594520 chr11:47594521 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7012 0 0 0 3 0 nucleus 0.438718584601375 0.438718573493644 0 0 hPsi_site_12429 iPseU_CNN:0;iRNA_PseU:0 12430 chr19 41125283 41125283 1 + A G COAD 41125282 + 41125262 41125302 41 GTGTGAAACACTACAGGGTGTATGTGGAGCTGCCCTGTGTG GTGTGAAACACTACAGGGTGTGTGTGGAGCTGCCCTGTGTG < 41bp 0.804929731754615 0.39089856937316 0.6089777 0.31577533 prediction 0.609859463509231 Functional Loss - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41125282 chr19:41125283 synonymous SNV . 0 22 hPsi_associated_SNPs_7013 0 0 1 0 1 Cytosol 0.438721295058466 0.438734082954213 0.2179554 0 hPsi_site_12430 iPseU_CNN:0.2179554;iRNA_PseU:0 12431 chr3 26751822 26751822 1 + A G LUAD 26751821 + 26751801 26751841 41 GGTTCACTATGGTGATCTCATATGTGGTATATTATGTGAGG GGTTCACTATGGTGATCTCATGTGTGGTATATTATGTGAGG < 41bp 0.804925845497689 0.393207613398463 0.27771986 0.26073486 prediction 0.609851690995378 Functional Loss - LRRC3B ENSG00000179796 CDS Human protein_coding chr3:26751821 chr3:26751822 nonsynonymous SNV 0.957 4 22 hPsi_associated_SNPs_7014 0 0 0 0 0 exosome 0.438718590821657 0.43871858861903 0 0 hPsi_site_12431 iPseU_CNN:0;iRNA_PseU:0 12432 chrX 140985517 140985517 1 + A G COAD 140985516 + 140985496 140985536 41 TACATGGATGCTTTGAAAGATATGGAAGACAGAGCCCAGGC TACATGGATGCTTTGAAAGATGTGGAAGACAGAGCCCAGGC < 41bp 0.901386210645262 0.596460504455335 0.44275472 0.31191528 prediction 0.609851412379853 Functional Loss - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140985516 chrX:140985517 nonsynonymous SNV 0.037 0 22 hPsi_associated_SNPs_7015 0 0 0 1 0 exosome 0.438718592988238 0.438718569727066 0 0 hPsi_site_12432 iPseU_CNN:0;iRNA_PseU:0 12433 chr7 5269339 5269339 1 + A G STAD 5269338 + 5269318 5269358 41 GGCGCAGCTGCAGGAAAAGGTACTTACGTGCCTTCATCCCC GGCGCAGCTGCAGGAAAAGGTGCTTACGTGCCTTCATCCCC < 41bp 0.917026916350121 0.612101273408773 0.94328254 0.6062454 prediction 0.609851285882696 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269338 chr7:5269339 nonsynonymous SNV 0.583 0 22 hPsi_associated_SNPs_7016 0 0 0 0 1 Cytosol 0.43871771626587 0.438698520987276 0.67407428 0 hPsi_site_12433 iPseU_CNN:0.67407428;iRNA_PseU:0 12434 chrX 135730488 135730488 1 + A G rs36063307 135730487 + 135730467 135730507 41 CATGAAAATTTTTATGTATTTACTTACTGTTTTTCTTATCA CATGAAAATTTTTATGTATTTGCTTACTGTTTTTCTTATCA < 41bp 0.804916058194064 0.406029666837543 0.34193775 0.22615069 prediction 0.609832116388128 Functional Loss - CD40LG ENSG00000102245 CDS Human protein_coding chrX:135730487 chrX:135730488 synonymous SNV . 0 22 hPsi_associated_SNPs_7017 0 0 0 0 1 exosome 0.438968043946209 0.439543187417413 0 0 hPsi_site_12434 iPseU_CNN:0;iRNA_PseU:0 12435 chrX 109694853 109694853 1 + A G LUAD 109694852 + 109694832 109694872 41 TGCTGGAGAAATGTCCACATTACCAAAGCCAGCTCCAGATG TGCTGGAGAAATGTCCACATTGCCAAAGCCAGCTCCAGATG < 41bp 0.804912778692312 0.381298253397603 0.48096067 0.41228032 prediction 0.609825557384624 Functional Loss - RTL9 ENSG00000243978 CDS Human protein_coding chrX:109694852 chrX:109694853 synonymous SNV . 0 22 hPsi_associated_SNPs_7018 0 0 0 0 0 unknown 0.432657859218113 0.438988602096817 0 0 hPsi_site_12435 iPseU_CNN:0;iRNA_PseU:0 12436 chr3 43759963 43759963 1 + A G UCEC 43759962 + 43759942 43759982 41 TTGGGGCAGGACATTATGTATATGCAGATCAACCAGAAGAA TTGGGGCAGGACATTATGTATGTGCAGATCAACCAGAAGAA < 41bp 0.804908641342778 0.409845584929789 0.68360287 0.69013673 prediction 0.609817282685556 Functional Loss - ABHD5 ENSG00000011198 CDS Human protein_coding chr3:43759962 chr3:43759963 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7019 0 0 1 0 1 Ribosome 0.438718366446868 0.43871749371219 0 0 hPsi_site_12436 iPseU_CNN:0;iRNA_PseU:0 12437 chr20 33511196 33511196 1 + A G GBM 33511195 + 33511175 33511215 41 ACGAACGCTTTGAGACAACCTACTTTAAGAAGTTTCCTGGA ACGAACGCTTTGAGACAACCTGCTTTAAGAAGTTTCCTGGA < 41bp 0.804889213456002 0.36973999906077 0.37696072 0.21185878 prediction 0.609778426912004 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33511195 chr20:33511196 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_7020 0 0 1 1 2 Ribosome 0.438795427114787 0.438889697203312 0 0 hPsi_site_12437 iPseU_CNN:0;iRNA_PseU:0 12438 chr10 99520040 99520040 1 + A G rs3750611 99520039 + 99520019 99520059 41 TGGGTCCTGGATTCCAGGGCTATTCCCTGGAGGACAGTCTC TGGGTCCTGGATTCCAGGGCTGTTCCCTGGAGGACAGTCTC < 41bp 0.80488337057101 0.409984832065611 0.37270355 0.21890128 prediction 0.60976674114202 Functional Loss - ZFYVE27 ENSG00000155256 UTR3 Human protein_coding chr10:99520039 chr10:99520040 . . 0 22 hPsi_associated_SNPs_7021 0 0 1 0 0 Ribosome 0.438731070369124 0.4387186541287 0 0 hPsi_site_12438 iPseU_CNN:0;iRNA_PseU:0 12439 chr11 47256412 47256412 1 + T G CESC 47256411 + 47256391 47256431 41 CGTAGATCAAACAGTGAAAATTTGGGACCTGCGCCAGGTTA CGTAGATCAAACAGTGAAAATGTGGGACCTGCGCCAGGTTA < 41bp 0.819554027149624 0.51467470671669 0.5781354 0.33868742 prediction 0.609758640865868 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256411 chr11:47256412 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_7022 0 0 1 1 1 Cytosol 0.438718620193617 0.438718568075384 0.1562708 0 hPsi_site_12439 iPseU_CNN:0.1562708;iRNA_PseU:0 12440 chrX 35985882 35985882 1 + A G BRCA 35985881 + 35985861 35985901 41 TGTGAAGAGCCAGTGAAGGATATGCTATTAGCCTTTCCCAA TGTGAAGAGCCAGTGAAGGATGTGCTATTAGCCTTTCCCAA < 41bp 0.804863896950127 0.388802324002663 0.64821553 0.5146517 prediction 0.609727793900255 Functional Loss - CFAP47 ENSG00000165164 CDS Human protein_coding chrX:35985881 chrX:35985882 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_7023 0 0 0 0 1 cytosol 0.43874761430327 0.438741961001812 0.26712766 0 hPsi_site_12440 iPseU_CNN:0.26712766;iRNA_PseU:0 12441 chr7 121659280 121659280 1 + T G STAD 121659279 + 121659259 121659299 41 TGATCGTGTCAGCCCTGACTTTTATCTGTCTAGTGGTTCTT TGATCGTGTCAGCCCTGACTTGTATCTGTCTAGTGGTTCTT < 41bp 0.842431763119261 0.537570683291917 0.371253 0.33973384 prediction 0.609722159654688 Functional Loss - PTPRZ1 ENSG00000106278 CDS Human protein_coding chr7:121659279 chr7:121659280 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7024 0 0 0 0 1 exosome 0.438718795347581 0.438560833134061 0 0 hPsi_site_12441 iPseU_CNN:0;iRNA_PseU:0 12442 chr17 37814703 37814703 1 + T G UCS 37814702 + 37814682 37814722 41 TACCTGCTCCCCATCGTCTCTTTTGTCCTCGCCTGGTTGGA TACCTGCTCCCCATCGTCTCTGTTGTCCTCGCCTGGTTGGA < 41bp 0.851196894227917 0.546374002309339 0.36158335 0.28591472 prediction 0.609645783837156 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814702 chr17:37814703 nonsynonymous SNV 0.956 2 22 hPsi_associated_SNPs_7025 0 0 1 0 2 Ribosome 0.438721518836763 0.438973850019422 0 0 hPsi_site_12442 iPseU_CNN:0;iRNA_PseU:0 12443 chr5 74069801 74069801 1 + T G UCEC 74069800 + 74069780 74069820 41 TCATCCCCACTGTATACAACTTTGGGTGTTATTACCAAAGG TCATCCCCACTGTATACAACTGTGGGTGTTATTACCAAAGG < 41bp 0.836130235052225 0.531316170427371 0.3153327 0.2629605 prediction 0.609628129249708 Functional Loss - NSA2 ENSG00000164346 CDS Human protein_coding chr5:74069800 chr5:74069801 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_7026 0 0 1 0 1 Cytosol 0.438718542737338 0.438718590479627 0 0 hPsi_site_12443 iPseU_CNN:0;iRNA_PseU:0 12444 chr19 10794617 10794617 1 + A G UCEC 10794616 + 10794596 10794636 41 CTGGGTATGGAAGCTATGGGTACGGAGGCAACTCGGCGACA CTGGGTATGGAAGCTATGGGTGCGGAGGCAACTCGGCGACA < 41bp 0.804801538184411 0.37194784152552 0.91363317 0.5326509 prediction 0.609603076368822 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794616 chr19:10794617 nonsynonymous SNV 0.969 2 22 hPsi_associated_SNPs_7027 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0.76196454 0 hPsi_site_12444 iPseU_CNN:0.76196454;iRNA_PseU:0 12445 chr12 129442176 129442176 1 + T G ESCA 129442175 + 129442155 129442195 41 TGAAGTCACAGGGCTACTGTTTTCCAATCCTCAGGTAAAGA TGAAGTCACAGGGCTACTGTTGTCCAATCCTCAGGTAAAGA < 41bp 0.804792220115717 0.474573788732556 0.573259 0.41994283 prediction 0.609584440231435 Functional Loss - GLT1D1 ENSG00000151948 CDS Human protein_coding chr12:129442175 chr12:129442176 nonsynonymous SNV 0.232 3 22 hPsi_associated_SNPs_7028 0 0 0 0 2 Cytosol 0.43882342357299 0.438719339961123 0.146518 0 hPsi_site_12445 iPseU_CNN:0.146518;iRNA_PseU:0 12446 chr3 148459782 148459782 1 + T G UCEC 148459781 + 148459761 148459801 41 TCTCCAGCTTCTAAAATATATTCCCCCAAAAGCCAAATCCC TCTCCAGCTTCTAAAATATATGCCCCCAAAAGCCAAATCCC < 41bp 0.804791925001335 0.479905249639212 0.67412215 0.33053088 prediction 0.60958385000267 Functional Loss - AGTR1 ENSG00000144891 CDS Human protein_coding chr3:148459781 chr3:148459782 nonsynonymous SNV 0.915 0 22 hPsi_associated_SNPs_7029 0 0 0 0 0 Endoplasmic reticulum 0.438718567141773 0.43871885957296 0.3482443 0 hPsi_site_12446 iPseU_CNN:0.3482443;iRNA_PseU:0 12447 chr20 61438693 61438693 1 + A G rs149946624 61438692 + 61438672 61438712 41 TGCAGGGTATTGGGATGCGTTACTGAGGCCCAAATCTGCCC TGCAGGGTATTGGGATGCGTTGCTGAGGCCCAAATCTGCCC < 41bp 0.804790882144098 0.483678513771514 0.61189234 0.31272343 prediction 0.609581764288197 Functional Loss - OGFR ENSG00000060491 UTR5 Human protein_coding chr20:61438692 chr20:61438693 . . 0 22 hPsi_associated_SNPs_7030 0 0 1 0 0 Ribosome 0.438613005945448 0.438705267649663 0.22378468 0 hPsi_site_12447 iPseU_CNN:0.22378468;iRNA_PseU:0 12448 chr4 83987688 83987688 1 + A G rs142625330 83987687 + 83987667 83987707 41 CGAAGAACTTGGAGCTCTTTTAGAGATCCCTGCAGCTAAGG CGAAGAACTTGGAGCTCTTTTGGAGATCCCTGCAGCTAAGG < 41bp 0.804780385662982 0.395567661486107 0.35910273 0.2603345 prediction 0.609560771325965 Functional Loss - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83987687 chr4:83987688 synonymous SNV . 0 22 hPsi_associated_SNPs_7031 0 0 1 0 2 Ribosome 0.438718589281014 0.43871859210569 0 0 hPsi_site_12448 iPseU_CNN:0;iRNA_PseU:0 12449 chr5 40843666 40843666 1 + T G KIRC 40843665 + 40843645 40843685 41 AGCCACTGTGGAAGAGGAGGTTTATGATGACCCAGAGCACG AGCCACTGTGGAAGAGGAGGTGTATGATGACCCAGAGCACG < 41bp 0.804776037816037 0.485788476463866 0.45574263 0.432492 prediction 0.609552075632073 Functional Loss - CARD6 ENSG00000132357 CDS Human protein_coding chr5:40843665 chr5:40843666 synonymous SNV . 0 22 hPsi_associated_SNPs_7032 0 0 0 0 0 exosome 0.438718594305765 0.438765527357314 0 0 hPsi_site_12449 iPseU_CNN:0;iRNA_PseU:0 12450 chr5 71622512 71622512 1 + A G STAD 71622511 + 71622491 71622531 41 GAAGGGGGAGTTGATAACCTTACTACATTTGTGTGAGTCTC GAAGGGGGAGTTGATAACCTTGCTACATTTGTGTGAGTCTC < 41bp 0.805600319206544 0.500824922805697 0.35408515 0.26501054 prediction 0.609550792801694 Functional Loss - PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71622511 chr5:71622512 synonymous SNV . 0 22 hPsi_associated_SNPs_7033 0 0 1 2 2 chromatin 0.438719246820758 0.438718006561207 0 0 hPsi_site_12450 iPseU_CNN:0;iRNA_PseU:0 12451 chr2 3622923 3622923 1 + A C rs17552296 3622922 + 3622902 3622942 41 GCGAGATTTGGGTCTCTTCCTAAGCCGGCGCTCGGCAAGGT GCGAGATTTGGGTCTCTTCCTCAGCCGGCGCTCGGCAAGGT < 41bp 0.804771656445513 0.468898904395812 0.36457476 0.1582841 prediction 0.609543312891026 Functional Loss - RPS7 ENSG00000171863 UTR5 Human protein_coding chr2:3622922 chr2:3622923 . . 0 22 hPsi_associated_SNPs_7034 1 0 1 0 1 Nucleus 0.438680587102504 0.438608993250967 0 0 hPsi_site_12451 iPseU_CNN:0;iRNA_PseU:0 12452 chr16 68725667 68725667 1 + A G UCEC 68725666 + 68725646 68725686 41 AAGAAGTTCCTGAAGCAGGATACATATGACGTGCACCTTTC AAGAAGTTCCTGAAGCAGGATGCATATGACGTGCACCTTTC < 41bp 0.91570380637399 0.610939784994782 0.60842836 0.32579017 prediction 0.609528042758417 Functional Loss - CDH3 ENSG00000062038 CDS Human protein_coding chr16:68725666 chr16:68725667 nonsynonymous SNV 0.779 0 22 hPsi_associated_SNPs_7035 0 0 0 0 1 Endoplasmic reticulum 0.438680568286397 0.438717741673164 0.21685672 0 hPsi_site_12452 iPseU_CNN:0.21685672;iRNA_PseU:0 12453 chr8 17412526 17412526 1 + T G UCEC 17412525 + 17412505 17412545 41 GGGATGGCTTACTGTTTAGATTTCTTGCCAGAGTGAGTAAG GGGATGGCTTACTGTTTAGATGTCTTGCCAGAGTGAGTAAG < 41bp 0.828087775908822 0.523337534174252 0.479431 0.32813567 prediction 0.60950048346914 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17412525 chr8:17412526 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7036 0 0 1 0 2 Ribosome 0.438714362528452 0.438727716003919 0 0 hPsi_site_12453 iPseU_CNN:0;iRNA_PseU:0 12454 chr8 95780683 95780683 1 + T G rs144957197 95780682 + 95780662 95780702 41 GCAGGCACCATCTCAAGATTTTTTTCTGCGATTGACACAGT GCAGGCACCATCTCAAGATTTGTTTCTGCGATTGACACAGT < 41bp 0.804726250516653 0.468985006257147 0.3294081 0.2737729 prediction 0.609452501033307 Functional Loss - DPY19L4 ENSG00000156162 CDS Human protein_coding chr8:95780682 chr8:95780683 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7037 0 0 1 0 2 Endoplasmic reticulum 0.440146091018196 0.438818988557324 0 0 hPsi_site_12454 iPseU_CNN:0;iRNA_PseU:0 12455 chr6 54791254 54791254 1 + A G LIHC 54791253 + 54791233 54791273 41 CAACTCGAGGAGTATCTGTTTACATTCTGCTTGATGAGTCC CAACTCGAGGAGTATCTGTTTGCATTCTGCTTGATGAGTCC < 41bp 0.906800934762658 0.602101266683216 0.5690284 0.35723376 prediction 0.609399336158883 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54791253 chr6:54791254 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_7038 0 0 1 0 1 exosome 0.438744350733073 0.43875712766755 0.1380568 0 hPsi_site_12455 iPseU_CNN:0.1380568;iRNA_PseU:0 12456 chr10 75525628 75525628 1 + A G LIHC 75525627 + 75525607 75525647 41 TGCTTATGACCGCCCTGAGCTATCCCTGGGCTCTTATGAAT TGCTTATGACCGCCCTGAGCTGTCCCTGGGCTCTTATGAAT < 41bp 0.804690782789239 0.372612857929705 0.30381393 0.18115109 prediction 0.609381565578478 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75525627 chr10:75525628 synonymous SNV . 0 22 hPsi_associated_SNPs_7039 0 0 1 0 2 Nucleus 0.438718486360531 0.438718635979714 0 0 hPsi_site_12456 iPseU_CNN:0;iRNA_PseU:0 12457 chr13 32527463 32527463 1 + A G LUSC 32527462 + 32527442 32527482 41 ATCACCAAGTTTGAAGAGTGTATGCAGAGTGTCGACATCGC ATCACCAAGTTTGAAGAGTGTGTGCAGAGTGTCGACATCGC < 41bp 0.860184459602282 0.555512924667882 0.74258345 0.6763805 prediction 0.6093430698688 Functional Loss - EEF1DP3 ENSG00000229715 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr13:32527462 chr13:32527463 . . 0 22 hPsi_associated_SNPs_7040 0 0 0 0 0 unknown 0.438803548582267 0.438652605283876 0.1324059 0 hPsi_site_12457 iPseU_CNN:0.1324059;iRNA_PseU:0 12458 chr2 9484907 9484907 1 + T G UCEC 9484906 + 9484886 9484926 41 AATGTTCAGTTAAAAATGGTTTTCTGACCATATCCCATGGT AATGTTCAGTTAAAAATGGTTGTCTGACCATATCCCATGGT < 41bp 0.804663936535434 0.471476750267346 0.73134947 0.4228199 prediction 0.609327873070867 Functional Loss - ASAP2 ENSG00000151693 CDS Human protein_coding chr2:9484906 chr2:9484907 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_7041 0 0 0 0 2 Ribosome 0.438590011572428 0.438718477113696 0.46269894 0 hPsi_site_12458 iPseU_CNN:0.46269894;iRNA_PseU:0 12459 chr15 101451169 101451169 1 + A C rs145852327 101451168 + 101451148 101451188 41 TAACAGTGCTTTTGGCTCCTTAACACCCCCTCGCCTGGCAC TAACAGTGCTTTTGGCTCCTTCACACCCCCTCGCCTGGCAC < 41bp 0.804637388466835 0.462477532159589 0.6661338 0.42163634 prediction 0.609274776933671 Functional Loss - LOC101927751 ENSG00000259583 ncRNA_intronic Human antisense chr15:101451168 chr15:101451169 . . 0 22 hPsi_associated_SNPs_7042 0 0 0 0 0 unknown 0.438718600127469 0.43871849848462 0.3322676 0 hPsi_site_12459 iPseU_CNN:0.3322676;iRNA_PseU:0 12460 chr11 134018494 134018494 1 + A G UCEC 134018493 + 134018473 134018513 41 GGTTCTGGTTGTCCTTGCTGTACTGGCCCTGATCACGTTGG GGTTCTGGTTGTCCTTGCTGTGCTGGCCCTGATCACGTTGG < 41bp 0.918081025256996 0.613448692256034 0.82014275 0.3230049 prediction 0.609264666001924 Functional Loss - JAM3 ENSG00000166086 CDS Human protein_coding chr11:134018493 chr11:134018494 synonymous SNV . 0 22 hPsi_associated_SNPs_7043 0 0 1 0 2 nucleoplasm 0.438718709154647 0.438718591338127 0.6402855 0 hPsi_site_12460 iPseU_CNN:0.6402855;iRNA_PseU:0 12461 chr1 114454068 114454068 1 + T G PAAD 114454067 + 114454047 114454087 41 CTTACTCCGAGCTTCGTGCCTTTGTCGCAGCACTGAAGCCT CTTACTCCGAGCTTCGTGCCTGTGTCGCAGCACTGAAGCCT < 41bp 0.804628853091246 0.463679893076139 0.8853754 0.5575961 prediction 0.609257706182492 Functional Loss - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114454067 chr1:114454068 nonsynonymous SNV 0.429 3 22 hPsi_associated_SNPs_7044 0 0 1 0 0 chromatin 0.438717403196159 0.438726773830262 0.6555586 0 hPsi_site_12461 iPseU_CNN:0.6555586;iRNA_PseU:0 12462 chr5 179192400 179192400 1 + A G LGG 179192399 + 179192379 179192419 41 ATGGCGATCAACAGAATGGCTACGGGGACCTCTTTCCTGGG ATGGCGATCAACAGAATGGCTGCGGGGACCTCTTTCCTGGG < 41bp 0.804623648646504 0.384850944211208 0.66565996 0.2701996 prediction 0.609247297293008 Functional Loss - MAML1 ENSG00000161021 CDS Human protein_coding chr5:179192399 chr5:179192400 nonsynonymous SNV 0.775 3 22 hPsi_associated_SNPs_7045 0 0 1 0 1 Ribosome 0.43871859281967 0.438718590701775 0.33131992 0 hPsi_site_12462 iPseU_CNN:0.33131992;iRNA_PseU:0 12463 chr12 3131056 3131056 1 + A G UCEC 3131055 + 3131035 3131075 41 TTGGCCAGTCCAGCCCAAGCTACAGCGACCCCTACCTCGAA TTGGCCAGTCCAGCCCAAGCTGCAGCGACCCCTACCTCGAA < 41bp 0.917334540094038 0.612757217177038 0.39756545 0.28376544 prediction 0.609154645833999 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3131055 chr12:3131056 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_7046 0 0 0 0 1 Cytosol 0.438752872836859 0.438793252420939 0 0 hPsi_site_12463 iPseU_CNN:0;iRNA_PseU:0 12464 chrX 69370141 69370141 1 + A C SKCM 69370140 + 69370120 69370160 41 ACATCGGAAATATGGAGCATTACCGGATCAGGGAATAGCCA ACATCGGAAATATGGAGCATTCCCGGATCAGGGAATAGCCA < 41bp 0.886516945559282 0.581939771445402 0.84717476 0.30261517 prediction 0.609154348227761 Functional Loss - IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69370140 chrX:69370141 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_7047 0 0 1 0 1 Cytosol 0.438665173603755 0.438718555798803 0.69434952 0 hPsi_site_12464 iPseU_CNN:0.69434952;iRNA_PseU:0 12465 chr7 36450224 36450224 1 + A G SKCM 36450223 + 36450203 36450243 41 ACACCCCACAGAACCCCCATTATTACTCCAAATACAAAGGC ACACCCCACAGAACCCCCATTGTTACTCCAAATACAAAGGC < 41bp 0.80457351618995 0.373375047228497 0.3749277 0.3076066 prediction 0.6091470323799 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36450223 chr7:36450224 nonsynonymous SNV 0.635 0 22 hPsi_associated_SNPs_7048 0 0 1 0 1 Nucleus 0.438718592999948 0.438718593022774 0 0 hPsi_site_12465 iPseU_CNN:0;iRNA_PseU:0 12466 chr22 37334138 37334138 1 + T G UCEC 37334137 + 37334117 37334157 41 CAGGCCCTGTGAAGTCAGGGTTTGAGGGCTATGTGGAGCTC CAGGCCCTGTGAAGTCAGGGTGTGAGGGCTATGTGGAGCTC < 41bp 0.804572359658428 0.480858996767764 0.63486254 0.40169996 prediction 0.609144719316855 Functional Loss - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37334137 chr22:37334138 nonsynonymous SNV 0.014 3 22 hPsi_associated_SNPs_7049 0 0 0 0 0 Endoplasmic reticulum 0.438718592995146 0.438718597214383 0.26972508 0 hPsi_site_12466 iPseU_CNN:0.26972508;iRNA_PseU:0 12467 chr2 99234748 99234748 1 + A G LUAD 99234747 + 99234727 99234767 41 CCCATACTCTCTGTTCTTTCTATAAGTACAGAGTGAAATAA CCCATACTCTCTGTTCTTTCTGTAAGTACAGAGTGAAATAA < 41bp 0.804518224374016 0.4031435244578 0.4469869 0.34757924 prediction 0.609036448748032 Functional Loss - UNC50 ENSG00000115446 CDS Human protein_coding chr2:99234747 chr2:99234748 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_7050 0 0 1 0 0 Endoplasmic reticulum 0.438718785235348 0.438718916607784 0 0 hPsi_site_12467 iPseU_CNN:0;iRNA_PseU:0 12468 chr19 50306586 50306586 1 + T C UCEC 50306585 + 50306565 50306605 41 GCAACAAGACCTCGGTGCAGTTCCAGAATTTCTCACCCACT GCAACAAGACCTCGGTGCAGTCCCAGAATTTCTCACCCACT < 41bp 0.809959244046573 0.505441186548564 0.71673024 0.1966644 prediction 0.609036114996017 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50306585 chr19:50306586 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7051 0 0 1 0 1 Ribosome 0.439393865152422 0.439105681606075 0.43346048 0 hPsi_site_12468 iPseU_CNN:0.43346048;iRNA_PseU:0 12469 chr1 231131696 231131696 1 + A G LUSC 231131695 + 231131675 231131715 41 GTGCCTCAAACTCATTAAAGTATTTGTTCTTACATCAAATT GTGCCTCAAACTCATTAAAGTGTTTGTTCTTACATCAAATT < 41bp 0.804517476433164 0.401123727417563 0.3479076 0.28509623 prediction 0.609034952866327 Functional Loss - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231131695 chr1:231131696 synonymous SNV . 0 22 hPsi_associated_SNPs_7052 0 0 1 0 1 Endoplasmic reticulum 0.438904957623907 0.439486839990228 0 0 hPsi_site_12469 iPseU_CNN:0;iRNA_PseU:0 12470 chr5 177637620 177637620 1 + A C STAD 177637619 + 177637599 177637639 41 ATCAGAATAACTACAAGCCATACTGAGGCGGCAGCAGGAGC ATCAGAATAACTACAAGCCATCCTGAGGCGGCAGCAGGAGC < 41bp 0.804516584109901 0.442840142842515 0.34599173 0.17537823 prediction 0.609033168219802 Functional Loss - HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177637619 chr5:177637620 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_7053 0 0 1 0 1 Cytosol 0.438868651781559 0.438670538899738 0 0 hPsi_site_12470 iPseU_CNN:0;iRNA_PseU:0 12471 chr2 39931297 39931297 1 + A C LUSC 39931296 + 39931276 39931316 41 GCGAAACATTCCTTTTAATTTAACCAAGACCATACAGCAAG GCGAAACATTCCTTTTAATTTCACCAAGACCATACAGCAAG < 41bp 0.88621705904553 0.581707506979022 0.25376743 0.20091662 prediction 0.609019104133017 Functional Loss - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39931296 chr2:39931297 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7054 0 0 0 0 2 exosome 0.438722026155655 0.438720226291916 0 0 hPsi_site_12471 iPseU_CNN:0;iRNA_PseU:0 12472 chr1 116519313 116519313 1 + T G rs143618639 116519312 + 116519292 116519332 41 TCTACCAGATGTACTTGTGCTTCCTGCTGGCCGTGCTGCTG TCTACCAGATGTACTTGTGCTGCCTGCTGGCCGTGCTGCTG < 41bp 0.808464481546897 0.503955120971648 0.87965465 0.44827366 prediction 0.6090187211505 Functional Loss - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116519312 chr1:116519313 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_7055 0 0 0 0 1 cytosol 0.43919003487083 0.439612658242829 0.7593093 0 hPsi_site_12472 iPseU_CNN:0.7593093;iRNA_PseU:0 12473 chr3 39424913 39424913 1 + A C rs114422738 39424912 + 39424892 39424932 41 ATACACAGAACCTCATCTCCTACGGTGCTGAAGCCTGCAGC ATACACAGAACCTCATCTCCTCCGGTGCTGAAGCCTGCAGC < 41bp 0.804504870160204 0.471672206361333 0.30422232 0.23426053 prediction 0.609009740320408 Functional Loss - SLC25A38 ENSG00000144659 UTR5 Human protein_coding chr3:39424912 chr3:39424913 . . 0 22 hPsi_associated_SNPs_7056 2 0 1 0 0 Ribosome 0.438701456445918 0.438692498144956 0 0 hPsi_site_12473 iPseU_CNN:0;iRNA_PseU:0 12474 chr10 114044442 114044442 1 + T G UCEC 114044441 + 114044421 114044461 41 TACCAATTTGTGATCCCAGATTTATCACCTAAAAACAAGTC TACCAATTTGTGATCCCAGATGTATCACCTAAAAACAAGTC < 41bp 0.804494039788074 0.470069712594006 0.6307055 0.56196135 prediction 0.608988079576149 Functional Loss - TECTB ENSG00000119913 CDS Human protein_coding chr10:114044441 chr10:114044442 nonsynonymous SNV 0.977 5 22 hPsi_associated_SNPs_7057 0 0 0 0 1 unknown 0.438718588064832 0.438718593776382 0.1374883 0 hPsi_site_12474 iPseU_CNN:0.1374883;iRNA_PseU:0 12475 chr12 118582403 118582403 1 + A G HNSC 118582402 + 118582382 118582422 41 TCCCCACAGGCCTCCACCGCTATGTCTGGCTGGTTTACGAG TCCCCACAGGCCTCCACCGCTGTGTCTGGCTGGTTTACGAG < 41bp 0.804490687970567 0.378658167378214 0.26590264 0.20562387 prediction 0.608981375941134 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118582402 chr12:118582403 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_7058 0 0 1 0 1 Ribosome 0.438718607987521 0.438718587595336 0 0 hPsi_site_12475 iPseU_CNN:0;iRNA_PseU:0 12476 chr4 37592205 37592205 1 + A G ESCA 37592204 + 37592184 37592224 41 AGAAAGTTTTGCCTTGGAAGTACAAGACCATGTCTTCCAGA AGAAAGTTTTGCCTTGGAAGTGCAAGACCATGTCTTCCAGA < 41bp 0.804489106092674 0.429175726189219 0.76909065 0.42782745 prediction 0.608978212185347 Functional Loss - C4orf19 ENSG00000154274 CDS Human protein_coding chr4:37592204 chr4:37592205 synonymous SNV . 0 22 hPsi_associated_SNPs_7059 0 0 0 0 0 Ribosome 0.438718774918013 0.438718601759498 0.5381813 0 hPsi_site_12476 iPseU_CNN:0.5381813;iRNA_PseU:0 12477 chr11 35839380 35839380 1 + A C rs142863478 35839379 + 35839359 35839399 41 GAGATCTGGTTGTTTAAAAATATGTGACACCTCCCCCCACC GAGATCTGGTTGTTTAAAAATCTGTGACACCTCCCCCCACC < 41bp 0.804481108819276 0.477584079166956 0.50598276 0.30488285 prediction 0.608962217638552 Functional Loss - TRIM44;LDLRAD3 ENSG00000261355 ncRNA_exonic Human other chr11:35839379 chr11:35839380 . . 0 22 hPsi_associated_SNPs_7060 0 0 1 0 0 unknown 0.438718591546042 0.438718592995101 0.01196552 0 hPsi_site_12477 iPseU_CNN:0.01196552;iRNA_PseU:0 12478 chr1 161127448 161127448 1 + T C UCEC 161127447 + 161127427 161127467 41 TACTGCCCCAGAAATTGCAGTTCCTGAGCTGGATGGAAAGA TACTGCCCCAGAAATTGCAGTCCCTGAGCTGGATGGAAAGA < 41bp 0.804479502849115 0.497444529734134 0.2366384 0.16670758 prediction 0.608959005698229 Functional Loss - UFC1 ENSG00000143222 CDS Human protein_coding chr1:161127447 chr1:161127448 synonymous SNV . 0 22 hPsi_associated_SNPs_7061 0 0 1 0 2 Ribosome 0.438718563336977 0.438718560753613 0 0 hPsi_site_12478 iPseU_CNN:0;iRNA_PseU:0 12479 chr19 46027893 46027893 1 + A G COAD 46027892 + 46027872 46027912 41 GCACGCCCAGCTCCAGTGATTACTCGGACCTACAGAGGGTG GCACGCCCAGCTCCAGTGATTGCTCGGACCTACAGAGGGTG < 41bp 0.804473765818989 0.378545345362715 0.48489717 0.30185968 prediction 0.608947531637978 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46027892 chr19:46027893 nonsynonymous SNV 0.928 0 22 hPsi_associated_SNPs_7062 0 0 1 0 2 Ribosome 0.438718836557934 0.438718593832875 0 0 hPsi_site_12479 iPseU_CNN:0;iRNA_PseU:0 12480 chr5 44815238 44815238 1 + A G LUSC 44815237 + 44815217 44815257 41 AGGTTTTAATGATGATGTTCTACTTCAGATAGTTCACTTTC AGGTTTTAATGATGATGTTCTGCTTCAGATAGTTCACTTTC < 41bp 0.804454513273526 0.408295346010243 0.23870245 0.24844894 prediction 0.608909026547052 Functional Loss - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44815237 chr5:44815238 synonymous SNV . 0 22 hPsi_associated_SNPs_7063 0 0 1 0 0 Ribosome 0.436942169107552 0.438905988307867 0 0 hPsi_site_12480 iPseU_CNN:0;iRNA_PseU:0 12481 chr9 79014173 79014173 1 + A G rs7033581 79014172 + 79014152 79014192 41 CGGGAAGTTCTGCGCATGTGTAGCACGATTTCCTATGACCA CGGGAAGTTCTGCGCATGTGTGGCACGATTTCCTATGACCA < 41bp 0.804433352904732 0.425341312285987 0.3249525 0.26209688 prediction 0.608866705809464 Functional Loss - RPSAP9 ENSG00000234618 ncRNA_exonic Human processed_pseudogene chr9:79014172 chr9:79014173 . . 0 22 hPsi_associated_SNPs_7064 0 0 0 0 0 unknown 0.436533657013392 0.438761748138422 0 0 hPsi_site_12481 iPseU_CNN:0;iRNA_PseU:0 12482 chr2 24244579 24244579 1 + T G COAD 24244578 + 24244558 24244598 41 CTTACCCCGTGTGCATCAGTTTACTGTGCCTAGGGGTGAAG CTTACCCCGTGTGCATCAGTTGACTGTGCCTAGGGGTGAAG < 41bp 0.840407472873271 0.535988670577911 0.49579892 0.31518072 prediction 0.608837604590719 Functional Loss - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24244578 chr2:24244579 stopgain 0.102 0 22 hPsi_associated_SNPs_7065 0 0 1 0 2 Endoplasmic reticulum 0.438716184530323 0.438967739719199 0 0 hPsi_site_12482 iPseU_CNN:0;iRNA_PseU:0 12483 chr6 35745315 35745315 1 + T G UVM 35745314 + 35745294 35745334 41 ACTTGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGA ACTTGGACTCCGGTGGAGCCTGCTGTGCCCCCAGGGCCAGA < 41bp 0.804413025998733 0.462173803359814 0.4116224 0.22237965 prediction 0.608826051997466 Functional Loss - CLPSL2 ENSG00000196748 CDS Human protein_coding chr6:35745314 chr6:35745315 nonsynonymous SNV 0.837 3 22 hPsi_associated_SNPs_7066 0 0 0 0 2 exosome 0.438803307556158 0.438719352954653 0 0 hPsi_site_12483 iPseU_CNN:0;iRNA_PseU:0 12484 chr3 129009622 129009622 1 + A G HNSC 129009621 + 129009601 129009641 41 AGAGGCAGCCATACTTCATCTATTTTCCTCAAATCAAGACA AGAGGCAGCCATACTTCATCTGTTTTCCTCAAATCAAGACA < 41bp 0.911768564888684 0.607356690292235 0.48857695 0.3655927 prediction 0.608823749192899 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:129009621 chr3:129009622 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_7067 0 0 1 0 1 Ribosome 0.438668486640807 0.438554285290242 0 0 hPsi_site_12484 iPseU_CNN:0;iRNA_PseU:0 12485 chr7 104753453 104753453 1 + T G LIHC 104753452 + 104753432 104753472 41 TCATCAAGGACCTCCACTTTTTCCTTCGAGTGCTCATCCAA TCATCAAGGACCTCCACTTTTGCCTTCGAGTGCTCATCCAA < 41bp 0.804408052396058 0.487267371464664 0.3579762 0.27448097 prediction 0.608816104792116 Functional Loss - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104753452 chr7:104753453 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_7068 0 0 1 0 0 Cytosol 0.438717265417852 0.43872683924599 0 0 hPsi_site_12485 iPseU_CNN:0;iRNA_PseU:0 12486 chr17 72462797 72462797 1 + A G rs3744151 72462796 + 72462776 72462816 41 ACTTTCCCCTCGGGTCCAGGTAGGGCCTGGAGCTGCTGCAA ACTTTCCCCTCGGGTCCAGGTGGGGCCTGGAGCTGCTGCAA < 41bp 0.804400613683964 0.391381364382839 0.3259709 0.18078476 prediction 0.608801227367929 Functional Loss - CD300A ENSG00000167851 UTR5 Human protein_coding chr17:72462796 chr17:72462797 . . 0 22 hPsi_associated_SNPs_7069 0 0 0 0 1 Endoplasmic reticulum 0.438718592995138 0.438718592973781 0 0 hPsi_site_12486 iPseU_CNN:0;iRNA_PseU:0 12487 chr6 152419923 152419923 1 + A C UCEC 152419922 + 152419902 152419942 41 GCAAGAACGTGGTGCCCCTCTATGACCTGCTGCTGGAGATG GCAAGAACGTGGTGCCCCTCTCTGACCTGCTGCTGGAGATG < 41bp 0.804393900577605 0.49093701483962 0.4449382 0.30165192 prediction 0.60878780115521 Functional Loss - ESR1 ENSG00000091831 CDS Human protein_coding chr6:152419922 chr6:152419923 nonsynonymous SNV 0.979 4 22 hPsi_associated_SNPs_7070 0 0 0 3 1 exosome 0.438720938660406 0.438718369579471 0 0 hPsi_site_12487 iPseU_CNN:0;iRNA_PseU:0 12488 chr19 12902595 12902595 1 + A G UCEC 12902594 + 12902574 12902614 41 TGGGCCGCCCGGATGTGCACTAAAATGGAACAGCCCTTCTA TGGGCCGCCCGGATGTGCACTGAAATGGAACAGCCCTTCTA < 41bp 0.804387162413921 0.451546852272588 0.70234764 0.41570646 prediction 0.608774324827842 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12902594 chr19:12902595 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7071 0 0 1 0 0 Cytosol 0.438718585224626 0.438718600641665 0.40469528 0 hPsi_site_12488 iPseU_CNN:0.40469528;iRNA_PseU:0 12489 chr2 178082478 178082478 1 + A G GBM 178082477 + 178082457 178082497 41 GTTATAGTAGTAGAGGGGGCTATGGTGGTGGTGGACCAGGA GTTATAGTAGTAGAGGGGGCTGTGGTGGTGGTGGACCAGGA < 41bp 0.804375547150641 0.380738127926353 0.32177162 0.21535766 prediction 0.608751094301281 Functional Loss - HNRNPA3 ENSG00000170144 CDS Human protein_coding chr2:178082477 chr2:178082478 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_7072 0 0 1 0 2 Cytosol 0.438718590870205 0.438718592015703 0 0 hPsi_site_12489 iPseU_CNN:0;iRNA_PseU:0 12490 chr20 55953108 55953108 1 + T G UCEC 55953107 + 55953087 55953127 41 CCCCAGAAAAAAAATTACATTTTCCTGCGTAATGCAGCCGA CCCCAGAAAAAAAATTACATTGTCCTGCGTAATGCAGCCGA < 41bp 0.80437084067336 0.497557890184064 0.36864036 0.35305715 prediction 0.608741681346719 Functional Loss - RAE1 ENSG00000101146 CDS Human protein_coding chr20:55953107 chr20:55953108 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7073 0 0 1 0 1 Ribosome 0.438718605180001 0.438718563923049 0 0 hPsi_site_12490 iPseU_CNN:0;iRNA_PseU:0 12491 chr15 78882938 78882938 1 + A G UCEC 78882937 + 78882917 78882957 41 CTGCGCTCGATTCTATTCGCTACATTACAAGACACATCATG CTGCGCTCGATTCTATTCGCTGCATTACAAGACACATCATG < 41bp 0.804363430077992 0.390833347004754 0.6717126 0.34652138 prediction 0.608726860155984 Functional Loss - CHRNA5 ENSG00000169684 CDS Human protein_coding chr15:78882937 chr15:78882938 nonsynonymous SNV 0.479 1 22 hPsi_associated_SNPs_7074 0 0 0 0 1 nucleus 0.439837775610668 0.439085626859308 0.3434252 0 hPsi_site_12491 iPseU_CNN:0.3434252;iRNA_PseU:0 12492 chr4 128627893 128627893 1 + A G STAD 128627892 + 128627872 128627912 41 TTCGCCTATTCTCAGTAGGCTACAAGGTACTTCCAAAGTAG TTCGCCTATTCTCAGTAGGCTGCAAGGTACTTCCAAAGTAG < 41bp 0.804358118340613 0.392472148939772 0.20419964 0.15888727 prediction 0.608716236681227 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128627892 chr4:128627893 synonymous SNV . 0 22 hPsi_associated_SNPs_7075 0 0 1 0 0 nucleolus 0.438718675041437 0.438718925132821 0 0 hPsi_site_12492 iPseU_CNN:0;iRNA_PseU:0 12493 chr17 38122548 38122548 1 + A G GBM 38122547 + 38122527 38122567 41 GGGAATTTTGGCTTTAAGAATATGCTGGACACCCGAGTGGA GGGAATTTTGGCTTTAAGAATGTGCTGGACACCCGAGTGGA < 41bp 0.804345318439144 0.37893861948649 0.63363254 0.41117924 prediction 0.608690636878289 Functional Loss - GSDMA ENSG00000167914 CDS Human protein_coding chr17:38122547 chr17:38122548 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_7076 0 0 0 0 1 Nucleus 0.438715508587974 0.438718067934196 0.26726508 0 hPsi_site_12493 iPseU_CNN:0.26726508;iRNA_PseU:0 12494 chr7 12263954 12263954 1 + A G HNSC 12263953 + 12263933 12263973 41 CGACGTGAAATACATTGGTGTAAAATCAGCCTATGTCAGTT CGACGTGAAATACATTGGTGTGAAATCAGCCTATGTCAGTT < 41bp 0.804344251192033 0.395858296139088 0.6452131 0.31891784 prediction 0.608688502384067 Functional Loss - TMEM106B ENSG00000106460 CDS Human protein_coding chr7:12263953 chr7:12263954 synonymous SNV . 0 22 hPsi_associated_SNPs_7077 0 0 1 0 1 Ribosome 0.438657547407333 0.438718689408227 0.2904262 0 hPsi_site_12494 iPseU_CNN:0.2904262;iRNA_PseU:0 12495 chr15 20496716 20496716 1 + A G UCEC 20496715 + 20496695 20496735 41 GTTTGAACATGAAAGAAATGTACCTTCTTTCACTCTGTCAT GTTTGAACATGAAAGAAATGTGCCTTCTTTCACTCTGTCAT < 41bp 0.872672990477587 0.568329579422505 0.5204506 0.25258985 prediction 0.608686822110162 Functional Loss - CHEK2P2 ENSG00000259156 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:20496715 chr15:20496716 . . 0 22 hPsi_associated_SNPs_7078 0 0 0 2 0 unknown 0.438316140301375 0.437926811679427 0.0409012 0 hPsi_site_12495 iPseU_CNN:0.0409012;iRNA_PseU:0 12496 chr1 150936938 150936938 1 + A G UCEC 150936937 + 150936917 150936957 41 CCCGAAGTCTCTGGGCTAGCTACTCCCCCCAGCTCCTAGTT CCCGAAGTCTCTGGGCTAGCTGCTCCCCCCAGCTCCTAGTT < 41bp 0.905621791265348 0.601301633471444 0.787766 0.24844214 prediction 0.608640315587808 Functional Loss - SETDB1 ENSG00000143418 CDS Human protein_coding chr1:150936937 chr1:150936938 nonsynonymous SNV 0.438 0 22 hPsi_associated_SNPs_7079 0 0 1 2 0 Nucleus 0.438718594947973 0.438718602206948 0.575532 0 hPsi_site_12496 iPseU_CNN:0.575532;iRNA_PseU:0 12497 chr17 4995427 4995427 1 + T G UCEC 4995426 + 4995406 4995446 41 GGAAAGGCCTTCATTCAGAGTTCACACCTTATTCACCATCA GGAAAGGCCTTCATTCAGAGTGCACACCTTATTCACCATCA < 41bp 0.804313483520382 0.480924444622416 0.29676688 0.26363063 prediction 0.608626967040764 Functional Loss - ZFP3 ENSG00000180787 CDS Human protein_coding chr17:4995426 chr17:4995427 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_7080 0 0 0 0 0 exosome 0.438718076396291 0.438718590280924 0 0 hPsi_site_12497 iPseU_CNN:0;iRNA_PseU:0 12498 chr2 29386787 29386787 1 + A G SKCM 29386786 + 29386766 29386806 41 ATTTTAGCTGTTCTCCAAGATATGGAATATTTGCTCCCCCA ATTTTAGCTGTTCTCCAAGATGTGGAATATTTGCTCCCCCA < 41bp 0.804312488239529 0.384373669904246 0.292985 0.27970648 prediction 0.608624976479058 Functional Loss - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29386786 chr2:29386787 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7081 0 0 0 0 2 nucleus 0.438718593000192 0.438718593015769 0 0 hPsi_site_12498 iPseU_CNN:0;iRNA_PseU:0 12499 chr14 89039308 89039308 1 + A G rs116690538 89039307 + 89039287 89039327 41 TTAACAGCTTAGAAGAAACGTATAGTCCGTTCTTTAGAAAC TTAACAGCTTAGAAGAAACGTGTAGTCCGTTCTTTAGAAAC < 41bp 0.804304600260384 0.389622994987759 0.32940722 0.23675972 prediction 0.608609200520769 Functional Loss - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89039307 chr14:89039308 nonsynonymous SNV 0.795 4 22 hPsi_associated_SNPs_7082 1 0 1 0 1 Nucleus 0.438718657359347 0.438728613608196 0 0 hPsi_site_12499 iPseU_CNN:0;iRNA_PseU:0 12500 chr11 56113877 56113877 1 + A C rs191265773 56113876 + 56113856 56113896 41 CATCTCTGAGCTCTTTATTCTATCAGCAATGGCCTATGATC CATCTCTGAGCTCTTTATTCTCTCAGCAATGGCCTATGATC < 41bp 0.804303108307641 0.449422885786819 0.8667303 0.633145 prediction 0.608606216615283 Functional Loss - OR8K1 ENSG00000150261 CDS Human protein_coding chr11:56113876 chr11:56113877 synonymous SNV . 0 22 hPsi_associated_SNPs_7083 0 0 0 0 0 unknown 0.438656840634627 0.438727712937292 0.4671706 0 hPsi_site_12500 iPseU_CNN:0.4671706;iRNA_PseU:0 12501 chr6 43273225 43273225 1 + T C rs70953697 43273226 - 43273206 43273246 41 AGCCTCTGTGGCTTCTTCAATAAAATGTTGGCTCCCATGCC AGCCTCTGTGGCTTCTTCAATGAAATGTTGGCTCCCATGCC < 41bp 0.806855784211342 0.502554588168172 0.33448863 0.29521188 prediction 0.60860239208634 Functional Loss - CRIP3;SLC22A7 ENSG00000137204;ENSG00000146215 UTR3 Human other chr6:43273226 chr6:43273225 . . 0 22 hPsi_associated_SNPs_7084 0 0 0 0 0 unknown 0.438718593428767 0.438719627006492 0 0 hPsi_site_12501 iPseU_CNN:0;iRNA_PseU:0 12502 chr13 31232624 31232624 1 + A G STAD 31232623 + 31232603 31232643 41 GGTGGCTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCA GGTGGCTTTAAAACTAAAGGTGTAAACCAGAAGGCCAGCCA < 41bp 0.891004957411968 0.586710144333533 0.8179424 0.3484687 prediction 0.60858962615687 Functional Loss - USPL1 ENSG00000132952 CDS Human protein_coding chr13:31232623 chr13:31232624 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_7085 0 0 1 0 0 Cytosol 0.438670797050129 0.438197814144354 0.6358848 0 hPsi_site_12502 iPseU_CNN:0.6358848;iRNA_PseU:0 12503 chr22 26829961 26829961 1 + A G LGG 26829960 + 26829940 26829980 41 AGGGCCTCAACCAGAAGCTGTACCACAACCTGCAGGAGTAC AGGGCCTCAACCAGAAGCTGTGCCACAACCTGCAGGAGTAC < 41bp 0.914694538448726 0.610405589822379 0.9152336 0.3916113 prediction 0.608577897252693 Functional Loss - ASPHD2 ENSG00000128203 CDS Human protein_coding chr22:26829960 chr22:26829961 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7086 0 0 0 0 0 Endoplasmic reticulum 0.43854112579167 0.438674969327799 0.8304672 0 hPsi_site_12503 iPseU_CNN:0.8304672;iRNA_PseU:0 12504 chr1 192627471 192627471 1 + T G UCEC 192627470 + 192627450 192627490 41 GCAAAGAAGCTTTATAAGATTTACATCCAGCCACAGTCCCC GCAAAGAAGCTTTATAAGATTGACATCCAGCCACAGTCCCC < 41bp 0.822990890713557 0.518704395547743 0.7055588 0.2883994 prediction 0.608572990331628 Functional Loss - RGS13 ENSG00000127074 CDS Human protein_coding chr1:192627470 chr1:192627471 nonsynonymous SNV 0.851 4 22 hPsi_associated_SNPs_7087 0 0 0 0 1 nucleus 0.438718309846428 0.43871857393325 0.4111176 0 hPsi_site_12504 iPseU_CNN:0.4111176;iRNA_PseU:0 12505 chr14 97321577 97321577 1 + A G LGG 97321576 + 97321556 97321596 41 TATAGGTGTACTTGGTAGATTATGGCCTTGCTTATCGGTAC TATAGGTGTACTTGGTAGATTGTGGCCTTGCTTATCGGTAC < 41bp 0.907137098132745 0.602860821469611 0.49139878 0.3633632 prediction 0.608552553326268 Functional Loss - VRK1 ENSG00000100749 CDS Human protein_coding chr14:97321576 chr14:97321577 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7088 0 0 1 0 1 Nucleus 0.438717733975896 0.438719700815169 0 0 hPsi_site_12505 iPseU_CNN:0;iRNA_PseU:0 12506 chr2 170663527 170663527 1 + T G UCEC 170663526 + 170663506 170663546 41 GCATTGAATCTGCTAAGAAATTTGTAGAGACCCCTGGCCAG GCATTGAATCTGCTAAGAAATGTGTAGAGACCCCTGGCCAG < 41bp 0.804275417673142 0.458493315363369 0.35553944 0.3402785 prediction 0.608550835346284 Functional Loss - SSB ENSG00000138385 CDS Human protein_coding chr2:170663526 chr2:170663527 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7089 0 0 1 0 2 Ribosome 0.438718592995079 0.438718576216702 0 0 hPsi_site_12506 iPseU_CNN:0;iRNA_PseU:0 12507 chr20 25195538 25195538 1 + A G LIHC 25195537 + 25195517 25195557 41 TAAAGCATCGCCTTTCCTTGTAGGGGATGACTGTGTTTCCA TAAAGCATCGCCTTTCCTTGTGGGGGATGACTGTGTTTCCA < 41bp 0.804255619694261 0.390321233390022 0.36493313 0.2533587 prediction 0.608511239388521 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25195537 chr20:25195538 synonymous SNV . 0 22 hPsi_associated_SNPs_7090 0 0 1 0 2 Endoplasmic reticulum 0.438719351644103 0.438718558974743 0 0 hPsi_site_12507 iPseU_CNN:0;iRNA_PseU:0 12508 chr1 152975767 152975767 1 + A G STAD 152975766 + 152975746 152975786 41 AAGGTCCCTGAGCCAGGCTGTACCAAGGTCCCTGAGCCAGG AAGGTCCCTGAGCCAGGCTGTGCCAAGGTCCCTGAGCCAGG < 41bp 0.804248541854074 0.377341850264339 0.68537724 0.37947914 prediction 0.608497083708148 Functional Loss - SPRR3 ENSG00000163209 CDS Human protein_coding chr1:152975766 chr1:152975767 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_7091 0 0 0 0 1 exosome 0.438718526390546 0.438718592474392 0.37075448 0 hPsi_site_12508 iPseU_CNN:0.37075448;iRNA_PseU:0 12509 chr11 2929552 2929552 1 + A G rs429886 2929551 + 2929531 2929571 41 GCAGCTGCTGGGCGGGCCGGTATTTGGCAGGTACAGTGTGT GCAGCTGCTGGGCGGGCCGGTGTTTGGCAGGTACAGTGTGT < 41bp 0.804244434198439 0.379919013403827 0.6174048 0.18837458 prediction 0.608488868396878 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2929551 chr11:2929552 synonymous SNV . 0 22 hPsi_associated_SNPs_7092 0 0 0 0 2 Ribosome 0.438718592908776 0.438718592549753 0.2348096 0 hPsi_site_12509 iPseU_CNN:0.2348096;iRNA_PseU:0 12510 chr1 220835422 220835422 1 + A C LUSC 220835421 + 220835401 220835441 41 AAGTTGCCACGACTGTCACTTAATGGGGTTCGCTTCAAGCG AAGTTGCCACGACTGTCACTTCATGGGGTTCGCTTCAAGCG < 41bp 0.804239912001055 0.443072524173681 0.6760869 0.38356188 prediction 0.60847982400211 Functional Loss - MARK1 ENSG00000116141 CDS Human protein_coding chr1:220835421 chr1:220835422 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_7093 0 0 1 0 0 exosome 0.438718401782537 0.438725292446741 0.3521738 0 hPsi_site_12510 iPseU_CNN:0.3521738;iRNA_PseU:0 12511 chr1 15987650 15987650 1 + A G UCEC 15987649 + 15987629 15987669 41 ATCAGTGGAGACAGAAAAATTAACAGGTACTTCATCTGACA ATCAGTGGAGACAGAAAAATTGACAGGTACTTCATCTGACA < 41bp 0.804236427721674 0.41381644600531 0.20904803 0.19361302 prediction 0.608472855443348 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15987649 chr1:15987650 synonymous SNV . 0 22 hPsi_associated_SNPs_7094 0 0 1 0 0 exosome 0.438718594834282 0.43871859626678 0 0 hPsi_site_12511 iPseU_CNN:0;iRNA_PseU:0 12512 chrX 144904377 144904377 1 + A G LUSC 144904376 + 144904356 144904396 41 ATCTCCAGGCCGACTACAATTACATCAGTGCCATCGAGGCT ATCTCCAGGCCGACTACAATTGCATCAGTGCCATCGAGGCT < 41bp 0.908355350348689 0.604125614436582 0.5984637 0.41116482 prediction 0.608459471824214 Functional Loss - SLITRK2 ENSG00000185985 CDS Human protein_coding chrX:144904376 chrX:144904377 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7095 0 0 0 0 0 Cytosol 0.438668361238369 0.439628186068962 0.1969274 0 hPsi_site_12512 iPseU_CNN:0.1969274;iRNA_PseU:0 12513 chr9 88557126 88557126 1 + A G LUAD 88557125 + 88557105 88557145 41 GATTCAGGATGGGAGCTCAGTATGCCAGAAAAAATGGAGAA GATTCAGGATGGGAGCTCAGTGTGCCAGAAAAAATGGAGAA < 41bp 0.804224896534765 0.38109517512547 0.3536678 0.28966042 prediction 0.60844979306953 Functional Loss - NAA35 ENSG00000135040 CDS Human protein_coding chr9:88557125 chr9:88557126 nonsynonymous SNV 0.839 0 22 hPsi_associated_SNPs_7096 0 0 1 0 2 Cytosol 0.438708728898063 0.438625976733419 0 0 hPsi_site_12513 iPseU_CNN:0;iRNA_PseU:0 12514 chr12 48175321 48175321 1 + A C rs73291212 48175320 + 48175300 48175340 41 GGGAGGGAAGGGGCTGTTGGTACAAGGATGATTTTCTGTTA GGGAGGGAAGGGGCTGTTGGTCCAAGGATGATTTTCTGTTA < 41bp 0.859771314880725 0.555575401839956 0.64054704 0.25482222 prediction 0.608391826081539 Functional Loss - SLC48A1 ENSG00000211584 UTR3 Human protein_coding chr12:48175320 chr12:48175321 . . 0 22 hPsi_associated_SNPs_7097 0 0 1 1 0 Ribosome 0.438718593023076 0.438718592994882 0.28109408 0 hPsi_site_12514 iPseU_CNN:0.28109408;iRNA_PseU:0 12515 chr5 465858 465858 1 + A C UCEC 465857 + 465837 465877 41 TCGGGGAAGACGTGGACGGATACTGCGACACCATCGTGGCT TCGGGGAAGACGTGGACGGATCCTGCGACACCATCGTGGCT < 41bp 0.88826880689139 0.584084496370241 0.69947076 0.31800032 prediction 0.608368621042296 Functional Loss - EXOC3 ENSG00000180104 CDS Human protein_coding chr5:465857 chr5:465858 nonsynonymous SNV 0.031 0 22 hPsi_associated_SNPs_7098 0 0 1 0 0 Ribosome 0.437886686091684 0.438718839551766 0.39894152 0 hPsi_site_12515 iPseU_CNN:0.39894152;iRNA_PseU:0 12516 chr3 182635839 182635839 1 + A G LIHC 182635838 + 182635818 182635858 41 AGTGCATCGGATCCTTTCTATACCAACGACAGGAGCATCTT AGTGCATCGGATCCTTTCTATGCCAACGACAGGAGCATCTT < 41bp 0.804145531464536 0.404274608880773 0.7674616 0.480484 prediction 0.608291062929072 Functional Loss - ATP11B ENSG00000058063 CDS Human protein_coding chr3:182635838 chr3:182635839 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_7099 0 0 1 5 1 Endoplasmic reticulum 0.438718496798807 0.438718591495955 0.5349232 0 hPsi_site_12516 iPseU_CNN:0.5349232;iRNA_PseU:0 12517 chr12 52380676 52380676 1 + A G STAD 52380675 + 52380655 52380695 41 CCTTTAAATGTGCTGATATTTATGCCCTCGGGCTTGTATAT CCTTTAAATGTGCTGATATTTGTGCCCTCGGGCTTGTATAT < 41bp 0.804134259121684 0.380316488143173 0.50374246 0.30041328 prediction 0.608268518243367 Functional Loss - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52380675 chr12:52380676 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_7100 0 0 1 0 2 Endoplasmic reticulum 0.43871855360797 0.43871838172727 0.00748492000000001 0 hPsi_site_12517 iPseU_CNN:0.00748492000000001;iRNA_PseU:0 12518 chr7 4780473 4780473 1 + A G COAD 4780472 + 4780452 4780492 41 TCCTCCTCCTGTTGCAGGTGTACCTTCCGGTTTCCCAGCAC TCCTCCTCCTGTTGCAGGTGTGCCTTCCGGTTTCCCAGCAC < 41bp 0.804100533008128 0.375871727580727 0.4922205 0.31805325 prediction 0.608201066016257 Functional Loss - FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4780472 chr7:4780473 nonsynonymous SNV 0.924 2 22 hPsi_associated_SNPs_7101 0 0 0 0 1 Endoplasmic reticulum 0.438796428405157 0.438775083554036 0 0 hPsi_site_12518 iPseU_CNN:0;iRNA_PseU:0 12519 chr22 29534726 29534726 1 + A G ESCA 29534725 + 29534705 29534745 41 CCCGGTCCTCCAAAGTCCTCTATGTCATCACCACCAGCCCC CCCGGTCCTCCAAAGTCCTCTGTGTCATCACCACCAGCCCC < 41bp 0.804099356808314 0.371160404617043 0.4384547 0.4133566 prediction 0.608198713616628 Functional Loss - KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29534725 chr22:29534726 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_7102 0 0 1 0 2 Endoplasmic reticulum 0.438396832374729 0.437676521529055 0 0 hPsi_site_12519 iPseU_CNN:0;iRNA_PseU:0 12520 chr3 97868882 97868882 1 + A G UCEC 97868881 + 97868861 97868901 41 TAGGGACTGTTCTTATATCTTACATATTTGTCCTCTATACA TAGGGACTGTTCTTATATCTTGCATATTTGTCCTCTATACA < 41bp 0.880141828082914 0.576058494304007 0.26468626 0.21012598 prediction 0.608166667557813 Functional Loss - OR5H14 ENSG00000236032 CDS Human protein_coding chr3:97868881 chr3:97868882 nonsynonymous SNV 0.019 4 22 hPsi_associated_SNPs_7103 0 0 0 0 0 unknown 0.438719824558139 0.438718592600563 0 0 hPsi_site_12520 iPseU_CNN:0;iRNA_PseU:0 12521 chr4 78087306 78087306 1 + A G rs4150094 78087305 + 78087285 78087325 41 TACTTTAGACATTGGCACTTTATTTTTCTCGTAGATCTTTA TACTTTAGACATTGGCACTTTGTTTTTCTCGTAGATCTTTA < 41bp 0.804080379846393 0.404187145053406 0.3288352 0.2224693 prediction 0.608160759692786 Functional Loss - CCNG2 ENSG00000138764 UTR3 Human protein_coding chr4:78087305 chr4:78087306 . . 0 22 hPsi_associated_SNPs_7104 0 0 1 7 0 Ribosome 0.43344446883592 0.435403387345958 0 0 hPsi_site_12521 iPseU_CNN:0;iRNA_PseU:0 12522 chr12 48919809 48919809 1 + A G SARC 48919808 + 48919788 48919828 41 CCATCTGCCGCCCACTACTTTATGGACAGATCATGGGTAAA CCATCTGCCGCCCACTACTTTGTGGACAGATCATGGGTAAA < 41bp 0.912889078617619 0.608809584486066 0.36738926 0.3955131 prediction 0.608158988263106 Functional Loss - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48919808 chr12:48919809 nonsynonymous SNV 0.030 3 22 hPsi_associated_SNPs_7105 0 0 0 0 0 unknown 0.438718583302493 0.438718547999584 0 0 hPsi_site_12522 iPseU_CNN:0;iRNA_PseU:0 12523 chr19 41930396 41930396 1 + A G rs4674 41930395 + 41930375 41930415 41 GCCCAAACCCAACCCCAACCTACTCTTCTCAGACGTGTATC GCCCAAACCCAACCCCAACCTGCTCTTCTCAGACGTGTATC < 41bp 0.804075658198653 0.382693728366824 0.35981935 0.21243367 prediction 0.608151316397305 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41930395 chr19:41930396 synonymous SNV . 0 22 hPsi_associated_SNPs_7106 2 0 1 0 1 Cytosol 0.438718592999696 0.438718592799769 0 0 hPsi_site_12523 iPseU_CNN:0;iRNA_PseU:0 12524 chr5 176520335 176520335 1 + A G ACC 176520334 + 176520314 176520354 41 CTTCCCTCTGGCCCGACAGGTACTGGGCGCATCCCCCACCT CTTCCCTCTGGCCCGACAGGTGCTGGGCGCATCCCCCACCT < 41bp 0.804075131603812 0.38284084524758 0.90189886 0.23700327 prediction 0.608150263207623 Functional Loss - FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176520334 chr5:176520335 nonsynonymous SNV 0.696 0 22 hPsi_associated_SNPs_7107 0 0 1 0 0 Endoplasmic reticulum 0.438715441955427 0.438717546573618 0.80379772 0 hPsi_site_12524 iPseU_CNN:0.80379772;iRNA_PseU:0 12525 chr10 122622323 122622323 1 + T G UCEC 122622322 + 122622302 122622342 41 CTCAGGCCCTGGGAAAAAAGTTTACATATCCAGCCCACACT CTCAGGCCCTGGGAAAAAAGTGTACATATCCAGCCCACACT < 41bp 0.855960612996611 0.55190878680001 0.67985237 0.42824182 prediction 0.608103652393202 Functional Loss - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122622322 chr10:122622323 synonymous SNV . 0 22 hPsi_associated_SNPs_7108 0 0 0 0 1 Nucleus 0.438718594002594 0.438718592878841 0.35970474 0 hPsi_site_12525 iPseU_CNN:0.35970474;iRNA_PseU:0 12526 chr4 1806099 1806099 1 + A G BLCA 1806098 + 1806078 1806118 41 CTGACGAGGCGGGCAGTGTGTATGCAGGCATCCTCAGCTAC CTGACGAGGCGGGCAGTGTGTGTGCAGGCATCCTCAGCTAC < 41bp 0.913042579036378 0.609023256481789 0.60593736 0.30620122 prediction 0.608038645109178 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1806098 chr4:1806099 nonsynonymous SNV 0.948 4 22 hPsi_associated_SNPs_7109 7 0 1 0 1 Ribosome 0.438717806887731 0.438722104328979 0.21187472 0 hPsi_site_12526 iPseU_CNN:0.21187472;iRNA_PseU:0 12527 chr11 4661818 4661818 1 + A G STAD 4661817 + 4661797 4661837 41 TGCTGTTCTGGTCTTCTATGTACCCCTCATTGGGCTCTCGG TGCTGTTCTGGTCTTCTATGTGCCCCTCATTGGGCTCTCGG < 41bp 0.898754103091794 0.594761130293772 0.6305088 0.24412292 prediction 0.607985945596045 Functional Loss - OR51D1 ENSG00000197428 CDS Human protein_coding chr11:4661817 chr11:4661818 synonymous SNV . 0 22 hPsi_associated_SNPs_7110 0 0 0 0 0 unknown 0.438718575639342 0.438718579239217 0.2610176 0 hPsi_site_12527 iPseU_CNN:0.2610176;iRNA_PseU:0 12528 chrX 70511814 70511814 1 + A C LUSC 70511813 + 70511793 70511833 41 AAGGATAAAGGATTTGGCTTTATCCGCTTGGTGAGCAACTG AAGGATAAAGGATTTGGCTTTCTCCGCTTGGTGAGCAACTG < 41bp 0.880051500388535 0.576062849890878 0.29651785 0.25072503 prediction 0.607977300995315 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70511813 chrX:70511814 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7111 0 0 1 0 1 Nucleus 0.438718592995102 0.438718592701847 0 0 hPsi_site_12528 iPseU_CNN:0;iRNA_PseU:0 12529 chr7 107559657 107559657 1 + A G LUAD 107559656 + 107559636 107559676 41 CAGACCTTATCAGAAGCTTTTAGAGAAGCAAATCTTGCTGC CAGACCTTATCAGAAGCTTTTGGAGAAGCAAATCTTGCTGC < 41bp 0.803984224888917 0.405662371658872 0.6503004 0.47437435 prediction 0.607968449777834 Functional Loss - DLD ENSG00000091140 CDS Human protein_coding chr7:107559656 chr7:107559657 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7112 1 0 1 0 1 Cytosol 0.438618149703875 0.438718450551786 0.3006008 0 hPsi_site_12529 iPseU_CNN:0.3006008;iRNA_PseU:0 12530 chr19 12738650 12738650 1 + A G COAD 12738649 + 12738629 12738669 41 GGAGTAAAACCATATGAGTGTACTATCTGTGGAAAAGCCTT GGAGTAAAACCATATGAGTGTGCTATCTGTGGAAAAGCCTT < 41bp 0.803947757856814 0.395530549603217 0.33557 0.19818455 prediction 0.607895515713629 Functional Loss - ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12738649 chr19:12738650 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_7113 0 0 1 0 0 Cytosol 0.438718556250556 0.438724850391473 0 0 hPsi_site_12530 iPseU_CNN:0;iRNA_PseU:0 12531 chr19 1037661 1037661 1 + A G COAD 1037660 + 1037640 1037680 41 CCGGGACCCGGCGGCACATCTATGATACCAAGCTGGGAACC CCGGGACCCGGCGGCACATCTGTGATACCAAGCTGGGAACC < 41bp 0.912909619140282 0.609027401868357 0.34307942 0.2759111 prediction 0.607764434543851 Functional Loss - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037660 chr19:1037661 nonsynonymous SNV 0.965 1 22 hPsi_associated_SNPs_7114 0 0 1 0 1 Ribosome 0.438718593003567 0.438718593014768 0 0 hPsi_site_12531 iPseU_CNN:0;iRNA_PseU:0 12532 chr16 67304915 67304915 1 + A G rs1061356 67304914 + 67304894 67304934 41 GCCCCAGGTCCCTCTCCACCTACCTTCTGATCCACGCTCTA GCCCCAGGTCCCTCTCCACCTGCCTTCTGATCCACGCTCTA < 41bp 0.916379459632889 0.6125477326502 0.44985944 0.21738172 prediction 0.607663453965378 Functional Loss - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67304914 chr16:67304915 synonymous SNV . 0 22 hPsi_associated_SNPs_7115 0 0 0 0 0 Cytosol 0.438702815194127 0.438712703621541 0 0 hPsi_site_12532 iPseU_CNN:0;iRNA_PseU:0 12533 chr12 113444257 113444257 1 + A G LUAD 113444256 + 113444236 113444276 41 CCACACCCAGCCCCGAGGTTTATGCAGGGCTCATTGATCTG CCACACCCAGCCCCGAGGTTTGTGCAGGGCTCATTGATCTG < 41bp 0.80381800312767 0.365241044913918 0.32067272 0.36427242 prediction 0.607636006255341 Functional Loss - OAS2 ENSG00000111335 CDS Human protein_coding chr12:113444256 chr12:113444257 nonsynonymous SNV 0.006 4 22 hPsi_associated_SNPs_7116 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_12533 iPseU_CNN:0;iRNA_PseU:0 12534 chr21 32015215 32015215 1 + A G BRCA 32015214 + 32015194 32015234 41 TAAATCCTGACACAATGAGCTACTATGGCAACTACTACGGA TAAATCCTGACACAATGAGCTGCTATGGCAACTACTACGGA < 41bp 0.884288236737974 0.580485483067627 0.799909 0.33103216 prediction 0.607605507340693 Functional Loss - KRTAP20-3 ENSG00000206104 CDS Human protein_coding chr21:32015214 chr21:32015215 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_7117 0 0 0 0 0 unknown 0.438728879740204 0.439370248110536 0.599818 0 hPsi_site_12534 iPseU_CNN:0.599818;iRNA_PseU:0 12535 chr7 92161777 92161777 1 + A G HNSC 92161776 + 92161756 92161796 41 GTGGATTGCTTCATGTGTGCTATGCTCCAGAATTTGAAACA GTGGATTGCTTCATGTGTGCTGTGCTCCAGAATTTGAAACA < 41bp 0.803802245976562 0.39212926782648 0.59872466 0.46622595 prediction 0.607604491953125 Functional Loss - RBM48 ENSG00000127993 CDS Human protein_coding chr7:92161776 chr7:92161777 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_7118 0 0 1 0 2 Nucleus 0.455521715143983 0.450324250142367 0.19744932 0 hPsi_site_12535 iPseU_CNN:0.19744932;iRNA_PseU:0 12536 chr10 13152313 13152313 1 + T G SKCM 13152312 + 13152292 13152332 41 ATCAAGCCATGAAAGGGAGATTTGAGGAGCTTTCGGCCTGG ATCAAGCCATGAAAGGGAGATGTGAGGAGCTTTCGGCCTGG < 41bp 0.803800048595659 0.451478421344186 0.32502925 0.28714824 prediction 0.607600097191318 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13152312 chr10:13152313 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7119 0 0 1 0 1 nucleoplasm 0.438718592995061 0.438718594165095 0 0 hPsi_site_12536 iPseU_CNN:0;iRNA_PseU:0 12537 chr17 61601584 61601584 1 + A G rs138601922 61601583 + 61601563 61601603 41 GCTTCTGCGAACTCTTCGGCTACTCCCGAGTGGAGGTGATG GCTTCTGCGAACTCTTCGGCTGCTCCCGAGTGGAGGTGATG < 41bp 0.803792177600698 0.365974715941895 0.8233805 0.28294584 prediction 0.607584355201396 Functional Loss - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61601583 chr17:61601584 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_7120 0 0 0 0 2 unknown 0.438619870363018 0.438659142650457 0.646761 0 hPsi_site_12537 iPseU_CNN:0.646761;iRNA_PseU:0 12538 chr12 124497409 124497409 1 + A G COAD 124497408 + 124497388 124497428 41 GGAAAGGCCTTCAGTCAGAGTACGAGCCTCTGCATCCACCA GGAAAGGCCTTCAGTCAGAGTGCGAGCCTCTGCATCCACCA < 41bp 0.904981260639493 0.601189694336946 0.641853 0.23848537 prediction 0.607583132605094 Functional Loss - ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497408 chr12:124497409 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_7121 0 0 1 0 0 Nucleus 0.438558113963521 0.438638621882338 0.283706 0 hPsi_site_12538 iPseU_CNN:0.283706;iRNA_PseU:0 12539 chr11 5373047 5373047 1 + A C LUSC 5373046 + 5373026 5373066 41 TCTCAGGCCTATTTTATCCATACTCTTTCTGTCATGGAGTC TCTCAGGCCTATTTTATCCATCCTCTTTCTGTCATGGAGTC < 41bp 0.870306554376345 0.566522755184533 0.28751045 0.1942032 prediction 0.607567598383624 Functional Loss - OR51B6 ENSG00000176239 CDS Human protein_coding chr11:5373046 chr11:5373047 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7122 0 0 0 0 0 unknown 0.439545934079411 0.438721773435973 0 0 hPsi_site_12539 iPseU_CNN:0;iRNA_PseU:0 12540 chr14 31354684 31354684 1 + T G UCEC 31354683 + 31354663 31354703 41 TCCCCAAAGTGGTGGTGGTATTTATTGATGGTTGGCCTTCT TCCCCAAAGTGGTGGTGGTATGTATTGATGGTTGGCCTTCT < 41bp 0.859485379097576 0.555707273876123 0.28449458 0.23959541 prediction 0.607556210442907 Functional Loss - COCH ENSG00000100473 CDS Human protein_coding chr14:31354683 chr14:31354684 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_7123 0 0 1 0 1 Cytosol 0.438718592995102 0.43871859299515 0 0 hPsi_site_12540 iPseU_CNN:0;iRNA_PseU:0 12541 chr14 21461323 21461323 1 + T G KIRC 21461322 + 21461302 21461342 41 AGCCACAAACTTTGATGGACTTTGGCTCAGGTACTGGTTCT AGCCACAAACTTTGATGGACTGTGGCTCAGGTACTGGTTCT < 41bp 0.803767349126602 0.450079718702899 0.29719785 0.26397225 prediction 0.607534698253204 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21461322 chr14:21461323 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7124 0 0 1 0 2 Ribosome 0.438718592995102 0.438718592996726 0 0 hPsi_site_12541 iPseU_CNN:0;iRNA_PseU:0 12542 chr3 52019390 52019390 1 + A G BLCA 52019389 + 52019369 52019409 41 ATCTCCAGGTGGCACCTGGCTATGTGGTGACCGTGTTGACC ATCTCCAGGTGGCACCTGGCTGTGTGGTGACCGTGTTGACC < 41bp 0.80375176703457 0.372154013831435 0.47358754 0.29062676 prediction 0.60750353406914 Functional Loss - ABHD14A-ACY1;ACY1 ENSG00000114786;ENSG00000243989 CDS Human other chr3:52019389 chr3:52019390 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_7125 0 0 1 0 2 unknown 0.438716802720143 0.438730616021676 0 0 hPsi_site_12542 iPseU_CNN:0;iRNA_PseU:0 12543 chr3 143704422 143704422 1 + A G LUAD 143704421 + 143704401 143704441 41 AAGGTTGGCCATTTGCAAAGTATCTTGGAGCTTGTGGAAGA AAGGTTGGCCATTTGCAAAGTGTCTTGGAGCTTGTGGAAGA < 41bp 0.803732546691346 0.383686853518765 0.6633293 0.48150885 prediction 0.607465093382693 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143704421 chr3:143704422 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_7126 0 0 1 0 0 Ribosome 0.438718563265326 0.438717324634416 0.3266586 0 hPsi_site_12543 iPseU_CNN:0.3266586;iRNA_PseU:0 12544 chr1 248551764 248551764 1 + A G rs113215537 248551763 + 248551743 248551783 41 TACCATCCTCACACCCTTATTAAACCCTCTCATCTACAGTC TACCATCCTCACACCCTTATTGAACCCTCTCATCTACAGTC < 41bp 0.80373037615602 0.412502078935682 0.32167235 0.21897087 prediction 0.60746075231204 Functional Loss - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551763 chr1:248551764 synonymous SNV . 0 22 hPsi_associated_SNPs_7127 0 0 0 0 0 unknown 0.438718588858628 0.438725253846371 0 0 hPsi_site_12544 iPseU_CNN:0;iRNA_PseU:0 12545 chr1 163313614 163313614 1 + A G COAD 163313613 + 163313593 163313633 41 CTCCAGAGAAGTTAAAGAATTATAAAGAAAAAATGAAAGAT CTCCAGAGAAGTTAAAGAATTGTAAAGAAAAAATGAAAGAT < 41bp 0.803705600798345 0.396723742857541 0.32184595 0.30277014 prediction 0.60741120159669 Functional Loss - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163313613 chr1:163313614 nonsynonymous SNV 0.984 2 22 hPsi_associated_SNPs_7128 0 0 1 0 1 Cytosol 0.438709880720485 0.438629201527619 0 0 hPsi_site_12545 iPseU_CNN:0;iRNA_PseU:0 12546 chr12 9089488 9089488 1 + A C DLBC 9089487 + 9089467 9089507 41 CGAATCTCCTGAAGTGCGAGTACTGTGGGAAGTACGCCCCC CGAATCTCCTGAAGTGCGAGTCCTGTGGGAAGTACGCCCCC < 41bp 0.803695588842031 0.41224432120116 0.28039744 0.07959223 prediction 0.607391177684063 Functional Loss - PHC1 ENSG00000111752 CDS Human protein_coding chr12:9089487 chr12:9089488 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7129 0 0 0 0 1 Endoplasmic reticulum 0.438718377977462 0.438718572811566 0 0 hPsi_site_12546 iPseU_CNN:0;iRNA_PseU:0 12547 chr7 114655980 114655980 1 + T G rs77149653 114655979 + 114655959 114655999 41 GGAATGCTGTGGAATTTGTTTTCCTTCATAAATATTTATCT GGAATGCTGTGGAATTTGTTTGCCTTCATAAATATTTATCT < 41bp 0.819311168718238 0.515622606131566 0.4489859 0.28680038 prediction 0.607377125173344 Functional Loss - MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655979 chr7:114655980 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7130 0 0 1 0 0 Cytosol 0.438718592814236 0.438713866154326 0 0 hPsi_site_12547 iPseU_CNN:0;iRNA_PseU:0 12548 chr6 43034086 43034086 1 + A G STAD 43034085 + 43034065 43034105 41 CAGCAGCTCAGCAGGGTGGATATGAGATCCCAGCAAGGTTG CAGCAGCTCAGCAGGGTGGATGTGAGATCCCAGCAAGGTTG < 41bp 0.908006628831364 0.604320624501738 0.3520875 0.42339295 prediction 0.607372008659253 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43034085 chr6:43034086 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_7131 0 0 1 0 0 Cytosol 0.438792997212512 0.438638390523389 0 0 hPsi_site_12548 iPseU_CNN:0;iRNA_PseU:0 12549 chr1 46159453 46159453 1 + A G LUSC 46159452 + 46159432 46159472 41 AACTTTTTCTCTTACCACATTATCCCAACTGGTTTAAAGCC AACTTTTTCTCTTACCACATTGTCCCAACTGGTTTAAAGCC < 41bp 0.900975826168595 0.597314995992057 0.5776882 0.44510174 prediction 0.607321660353077 Functional Loss - TMEM69 ENSG00000159596 CDS Human protein_coding chr1:46159452 chr1:46159453 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_7132 0 0 1 0 0 Ribosome 0.438718592995099 0.438718592994623 0.1553764 0 hPsi_site_12549 iPseU_CNN:0.1553764;iRNA_PseU:0 12550 chr15 101170129 101170129 1 + A G rs73483052 101170128 + 101170108 101170148 41 TGTGCTGTGTGCACGGATGTTATATAATTACGGAGCAGACA TGTGCTGTGTGCACGGATGTTGTATAATTACGGAGCAGACA < 41bp 0.898862532297997 0.595207457447901 0.3309115 0.30260587 prediction 0.607310149700192 Functional Loss - ASB7 ENSG00000183475 CDS Human protein_coding chr15:101170128 chr15:101170129 synonymous SNV . 0 22 hPsi_associated_SNPs_7133 0 0 1 0 0 Ribosome 0.43877647710134 0.439123613351941 0 0 hPsi_site_12550 iPseU_CNN:0;iRNA_PseU:0 12551 chr10 8007409 8007409 1 + A G BLCA 8007408 + 8007388 8007428 41 AAAGATAAAGGCAGAGAAGATAAGATGAAAGCCCCAGCACC AAAGATAAAGGCAGAGAAGATGAGATGAAAGCCCCAGCACC < 41bp 0.803651100843761 0.398470641281199 0.3449098 0.28561288 prediction 0.607302201687521 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8007408 chr10:8007409 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_7134 0 0 1 0 0 Cytosol 0.438718596216297 0.438718592982755 0 0 hPsi_site_12551 iPseU_CNN:0;iRNA_PseU:0 12552 chr20 34136332 34136332 1 + A C STAD 34136331 + 34136311 34136351 41 TGGGCCTTCAAGAACCCAGATACTATTGAGCAGTGCCGGCG TGGGCCTTCAAGAACCCAGATCCTATTGAGCAGTGCCGGCG < 41bp 0.871683414654614 0.568039495005388 0.43282467 0.28314513 prediction 0.607287839298453 Functional Loss - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34136331 chr20:34136332 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_7135 0 0 1 0 2 Ribosome 0.438718521907909 0.438718415977906 0 0 hPsi_site_12552 iPseU_CNN:0;iRNA_PseU:0 12553 chr16 1374781 1374781 1 + T G COAD 1374780 + 1374760 1374800 41 TCCGAGCACAAGCCAAGAAGTTTGCGCCCTCATAAGCAGCG TCCGAGCACAAGCCAAGAAGTGTGCGCCCTCATAAGCAGCG < 41bp 0.803624530666091 0.46670943543797 0.616436 0.52878755 prediction 0.607249061332182 Functional Loss - UBE2I ENSG00000103275 CDS Human protein_coding chr16:1374780 chr16:1374781 nonsynonymous SNV 0.848 1 22 hPsi_associated_SNPs_7136 0 0 1 0 1 Ribosome 0.438719030399583 0.438719209922803 0.1752969 0 hPsi_site_12553 iPseU_CNN:0.1752969;iRNA_PseU:0 12554 chr7 80292442 80292442 1 + T G UCEC 80292441 + 80292421 80292461 41 ATAGGGATCCATTTTTGAGTTTGGTTCCGTACCCTGTTACT ATAGGGATCCATTTTTGAGTTGGGTTCCGTACCCTGTTACT < 41bp 0.823139962363634 0.519534960019208 0.37090492 0.2906929 prediction 0.607210004688851 Functional Loss - CD36 ENSG00000135218 CDS Human protein_coding chr7:80292441 chr7:80292442 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_7137 0 0 0 0 1 Nucleus 0.432627427410675 0.43871856483012 0 0 hPsi_site_12554 iPseU_CNN:0;iRNA_PseU:0 12555 chr8 121222088 121222088 1 + A G GBM 121222087 + 121222067 121222107 41 CAGTGCCTGGGGCCTCAGGTTACCTGATCCTTTATGCTCCT CAGTGCCTGGGGCCTCAGGTTGCCTGATCCTTTATGCTCCT < 41bp 0.803595124925461 0.379276671251815 0.7185904 0.30517673 prediction 0.607190249850923 Functional Loss - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121222087 chr8:121222088 nonsynonymous SNV 0.653 4 22 hPsi_associated_SNPs_7138 0 0 0 0 2 Ribosome 0.438680811985737 0.438718356901859 0.4371808 0 hPsi_site_12555 iPseU_CNN:0.4371808;iRNA_PseU:0 12556 chr4 139966046 139966046 1 + A G rs147555577 139966045 + 139966025 139966065 41 TGGACCAGATGGTTGTGCCTTATTTTTTCTTCAAAACCGAT TGGACCAGATGGTTGTGCCTTGTTTTTTCTTCAAAACCGAT < 41bp 0.897152916672941 0.593568145881077 0.42518324 0.39537245 prediction 0.607169541583728 Functional Loss - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966045 chr4:139966046 synonymous SNV . 0 22 hPsi_associated_SNPs_7139 0 0 1 0 0 chromatin 0.438717400168512 0.438744668353988 0 0 hPsi_site_12556 iPseU_CNN:0;iRNA_PseU:0 12557 chr5 140515852 140515852 1 + A G LUAD 140515851 + 140515831 140515871 41 GAGCATATGGGAGTGTAGCCTATGCTCTATTCCAAGGCGAT GAGCATATGGGAGTGTAGCCTGTGCTCTATTCCAAGGCGAT < 41bp 0.803503039845878 0.39126428603495 0.49872804 0.29897058 prediction 0.607006079691756 Functional Loss - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140515851 chr5:140515852 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_7140 0 0 0 0 0 Endoplasmic reticulum 0.438722652939786 0.438735232748277 0 0 hPsi_site_12557 iPseU_CNN:0;iRNA_PseU:0 12558 chr9 72007251 72007251 1 + A C rs560778698 72007250 + 72007230 72007270 41 AGGCAAAACAGGAAACTTCTTAAGTGACAAATTTTAATGCC AGGCAAAACAGGAAACTTCTTCAGTGACAAATTTTAATGCC < 41bp 0.803469215359983 0.485452865272665 0.5912025 0.32545656 prediction 0.606938430719966 Functional Loss - FAM189A2 ENSG00000135063 UTR3 Human protein_coding chr9:72007250 chr9:72007251 . . 0 22 hPsi_associated_SNPs_7141 0 0 1 0 0 cytosol 0.438718888981107 0.438720623285648 0.182405 0 hPsi_site_12558 iPseU_CNN:0.182405;iRNA_PseU:0 12559 chr2 102642619 102642619 1 + T G UCEC 102642618 + 102642598 102642638 41 TACATTGAAGTGCCATTGATTTTTGATCCTGTCACAAGAGA TACATTGAAGTGCCATTGATTGTTGATCCTGTCACAAGAGA < 41bp 0.803459188085247 0.46491461262173 0.6193529 0.32708764 prediction 0.606918376170495 Functional Loss - IL1R2 ENSG00000115590 CDS Human protein_coding chr2:102642618 chr2:102642619 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_7142 0 0 0 0 2 Endoplasmic reticulum 0.437342796350101 0.436588732257443 0.2387058 0 hPsi_site_12559 iPseU_CNN:0.2387058;iRNA_PseU:0 12560 chr19 53762388 53762388 1 + A G BRCA 53762387 + 53762367 53762407 41 GGATATTGTTCTGCCCCACTTAGTGATGAAGTCACAAAGTC GGATATTGTTCTGCCCCACTTGGTGATGAAGTCACAAAGTC < 41bp 0.803405211352493 0.406586318033384 0.32555848 0.16831967 prediction 0.606810422704986 Functional Loss - VN1R2 ENSG00000196131 CDS Human protein_coding chr19:53762387 chr19:53762388 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_7143 0 0 0 0 0 unknown 0.43872038105557 0.438719211325431 0 0 hPsi_site_12560 iPseU_CNN:0;iRNA_PseU:0 12561 chr22 31283477 31283477 1 + A G UCEC 31283476 + 31283456 31283496 41 AATGGCAGCGGGCACTGCAGTATGAGCAGGAGCAGCGCGTG AATGGCAGCGGGCACTGCAGTGTGAGCAGGAGCAGCGCGTG < 41bp 0.803392066669183 0.365160398190095 0.6476466 0.36688453 prediction 0.606784133338366 Functional Loss - OSBP2 ENSG00000184792 CDS Human protein_coding chr22:31283476 chr22:31283477 nonsynonymous SNV 0.983 3 22 hPsi_associated_SNPs_7144 0 0 1 0 0 Cytosol 0.438537418858143 0.438269624000396 0.2952932 0 hPsi_site_12561 iPseU_CNN:0.2952932;iRNA_PseU:0 12562 chr19 47700572 47700572 1 + A G rs201475653 47700571 + 47700551 47700591 41 TTCTGAGTTGTTGCTCCAGATACGAAATGATGTGCTTGACT TTCTGAGTTGTTGCTCCAGATGCGAAATGATGTGCTTGACT < 41bp 0.80338592277483 0.386607515147985 0.6375056 0.28612712 prediction 0.60677184554966 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47700571 chr19:47700572 nonsynonymous SNV 0.872 2 22 hPsi_associated_SNPs_7145 0 0 1 0 2 Ribosome 0.43871048917988 0.438726120416133 0.2750112 0 hPsi_site_12562 iPseU_CNN:0.2750112;iRNA_PseU:0 12563 chr19 1271425 1271425 1 + T G rs370839613 1271424 + 1271404 1271444 41 GCTCTGCCGGGGGCCGGGGCTTCTTCCGTGGGGGCCGAGGA GCTCTGCCGGGGGCCGGGGCTGCTTCCGTGGGGGCCGAGGA < 41bp 0.803377767279222 0.469224247548887 0.4415671 0.3404491 prediction 0.606755534558445 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271424 chr19:1271425 nonsynonymous SNV 0.130 1 22 hPsi_associated_SNPs_7146 0 0 1 0 2 Ribosome 0.438718389838588 0.438718595839696 0 0 hPsi_site_12563 iPseU_CNN:0;iRNA_PseU:0 12564 chr1 92511190 92511190 1 + A C READ 92511189 + 92511169 92511209 41 GTGATGAAGCTTATTGTTATTAACTTCCCTCATCCAAATGT GTGATGAAGCTTATTGTTATTCACTTCCCTCATCCAAATGT < 41bp 0.867888262263523 0.564519726863936 0.37422174 0.23228756 prediction 0.606737070799175 Functional Loss - EPHX4 ENSG00000172031 CDS Human protein_coding chr1:92511189 chr1:92511190 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7147 0 0 1 0 1 exosome 0.438719544064024 0.438683245312416 0 0 hPsi_site_12564 iPseU_CNN:0;iRNA_PseU:0 12565 chr7 99965191 99965191 1 + A G rs572960085 99965190 + 99965170 99965210 41 CCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCAGGA CCGACTGGAGGAGAGTTACCTGCAAGAGCCTTCATCCAGGA < 41bp 0.873175591595772 0.569812393567511 0.47658557 0.28252697 prediction 0.606726396056522 Functional Loss - STAG3L5P-PVRIG2P-PILRB ENSG00000272752 ncRNA_exonic Human processed_transcript chr7:99965190 chr7:99965191 . . 0 22 hPsi_associated_SNPs_7148 0 0 1 0 0 unknown 0.43871926710763 0.43871858836334 0 0 hPsi_site_12565 iPseU_CNN:0;iRNA_PseU:0 12566 chr19 6850766 6850766 1 + A G UCEC 6850765 + 6850745 6850785 41 AAAAAGGCTTTCCGGGGGCTTACGGTAAGGGTCAATGTCCG AAAAAGGCTTTCCGGGGGCTTGCGGTAAGGGTCAATGTCCG < 41bp 0.803350654354009 0.38205744500438 0.4476916 0.2375426 prediction 0.606701308708018 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6850765 chr19:6850766 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_7149 0 0 0 0 2 Endoplasmic reticulum 0.438718592995517 0.438718593003676 0 0 hPsi_site_12566 iPseU_CNN:0;iRNA_PseU:0 12567 chr2 89037541 89037541 1 + T G KIRP 89037540 + 89037520 89037560 41 TTTTATCTTGGACTGGAAGTTTGACCGGGTACACAAATGGA TTTTATCTTGGACTGGAAGTTGGACCGGGTACACAAATGGA < 41bp 0.803312638924865 0.45584070759149 0.29901677 0.16263792 prediction 0.606625277849729 Functional Loss - RPIA ENSG00000153574 CDS Human protein_coding chr2:89037540 chr2:89037541 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7150 0 0 1 0 1 Cytosol 0.43865272414164 0.438718702950901 0 0 hPsi_site_12567 iPseU_CNN:0;iRNA_PseU:0 12568 chr1 46487694 46487694 1 + A C HNSC 46487693 + 46487673 46487713 41 GCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTA GCCAAAGAGGGACAAGGGATTCAATGTGACATTCCCCGCTA < 41bp 0.880840548055224 0.577528145364385 0.5867042 0.3376102 prediction 0.60662480538168 Functional Loss - MAST2 ENSG00000086015 CDS Human protein_coding chr1:46487693 chr1:46487694 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7151 0 0 0 2 2 Ribosome 0.438718592995102 0.438718592995108 0.1734084 0 hPsi_site_12568 iPseU_CNN:0.1734084;iRNA_PseU:0 12569 chr1 180243553 180243553 1 + T G SKCM 180243552 + 180243532 180243572 41 GATTACACGGTGGACAGTAATTTGGGCATCATTGCGCATGC GATTACACGGTGGACAGTAATGTGGGCATCATTGCGCATGC < 41bp 0.852913294816324 0.549603947974869 0.31118995 0.3321203 prediction 0.60661869368291 Functional Loss - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180243552 chr1:180243553 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_7152 0 0 1 0 0 chromatin 0.438817165335507 0.438644921806446 0 0 hPsi_site_12569 iPseU_CNN:0;iRNA_PseU:0 12570 chr17 4858804 4858804 1 + A G COAD 4858803 + 4858783 4858823 41 AGTTCTATCGCAATGGGAAGTACGATCTTGACTTCAAGTCG AGTTCTATCGCAATGGGAAGTGCGATCTTGACTTCAAGTCG < 41bp 0.91817928071389 0.614882261040801 0.6808083 0.36654493 prediction 0.606594039346177 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4858803 chr17:4858804 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_7153 0 0 1 0 1 nucleus 0.43888492772815 0.438735107810918 0.3616166 0 hPsi_site_12570 iPseU_CNN:0.3616166;iRNA_PseU:0 12571 chr17 3324554 3324554 1 + A G COAD 3324553 + 3324533 3324573 41 TGTGTCCTATGCCCATGTGGTAGCTGCTGTGCTGCAAATCC TGTGTCCTATGCCCATGTGGTGGCTGCTGTGCTGCAAATCC < 41bp 0.902449862035952 0.599166866416499 0.6440426 0.28789747 prediction 0.606565991238906 Functional Loss - OR3A3 ENSG00000159961 CDS Human protein_coding chr17:3324553 chr17:3324554 synonymous SNV . 0 22 hPsi_associated_SNPs_7154 0 0 0 0 0 exosome 0.438717997022399 0.438716937552504 0.2880852 0 hPsi_site_12571 iPseU_CNN:0.2880852;iRNA_PseU:0 12572 chr6 127471641 127471641 1 + A G HNSC 127471640 + 127471620 127471660 41 ATGTAAAAGTGGATTTTACTTACACCTTGGAAAGTGCCTTG ATGTAAAAGTGGATTTTACTTGCACCTTGGAAAGTGCCTTG < 41bp 0.803261248356464 0.386584017437232 0.6710201 0.25879258 prediction 0.606522496712927 Functional Loss - RSPO3 ENSG00000146374 CDS Human protein_coding chr6:127471640 chr6:127471641 synonymous SNV . 0 22 hPsi_associated_SNPs_7155 0 0 0 0 2 exosome 0.438720801038288 0.438727190945996 0.3420402 0 hPsi_site_12572 iPseU_CNN:0.3420402;iRNA_PseU:0 12573 chr2 63815801 63815801 1 + A C rs2278718 63815800 + 63815780 63815820 41 CTCCCTAGAGTTACACACGCTATCTCTCCCGCCAATTGCCG CTCCCTAGAGTTACACACGCTCTCTCTCCCGCCAATTGCCG < 41bp 0.803257576348807 0.455701417585245 0.32614744 0.20903558 prediction 0.606515152697614 Functional Loss - MDH1;WDPCP ENSG00000014641;ENSG00000143951 UTR5 Human other chr2:63815800 chr2:63815801 . . 0 22 hPsi_associated_SNPs_7156 1 0 0 0 0 unknown 0.438718596988998 0.438718578583988 0 0 hPsi_site_12573 iPseU_CNN:0;iRNA_PseU:0 12574 chr8 22862106 22862106 1 + A G UCEC 22862105 + 22862085 22862125 41 GGCCACGCATGTGCCCACAGTATGGGCCATCGACCAATATC GGCCACGCATGTGCCCACAGTGTGGGCCATCGACCAATATC < 41bp 0.916876280361858 0.613671089426633 0.55227154 0.39634642 prediction 0.606410381870449 Functional Loss - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22862105 chr8:22862106 synonymous SNV . 0 22 hPsi_associated_SNPs_7157 0 0 0 0 1 cytosol 0.438703231240347 0.439025063884535 0.10454308 0 hPsi_site_12574 iPseU_CNN:0.10454308;iRNA_PseU:0 12575 chr4 155720132 155720132 1 + A G COAD 155720131 + 155720111 155720151 41 GGGTAAAGAAACTTAGAGATTATGCTTTTGTTCACTTTTTC GGGTAAAGAAACTTAGAGATTGTGCTTTTGTTCACTTTTTC < 41bp 0.803202001225363 0.389314766556153 0.29458493 0.28706425 prediction 0.606404002450726 Functional Loss - RBM46 ENSG00000151962 CDS Human protein_coding chr4:155720131 chr4:155720132 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7158 0 0 0 0 0 exosome 0.438718632349011 0.438611422850199 0 0 hPsi_site_12575 iPseU_CNN:0;iRNA_PseU:0 12576 chr12 132394807 132394807 1 + T G UCEC 132394806 + 132394786 132394826 41 CTTCCTCCTGCAGATGAGTTTTTTCATCACCCTTTCCTCGA CTTCCTCCTGCAGATGAGTTTGTTCATCACCCTTTCCTCGA < 41bp 0.836099543225271 0.532913577981697 0.679708 0.3708305 prediction 0.606371930487148 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132394806 chr12:132394807 nonsynonymous SNV 0.936 4 22 hPsi_associated_SNPs_7159 0 0 1 0 2 Cytosol 0.443640260596686 0.438715631178168 0.359416 0 hPsi_site_12576 iPseU_CNN:0.359416;iRNA_PseU:0 12577 chr4 74608727 74608727 1 + A C rs2227545 74608726 + 74608706 74608746 41 TTATTTCTAAGTGGAAAAAGTATTAGCCACCATCTTACCTC TTATTTCTAAGTGGAAAAAGTCTTAGCCACCATCTTACCTC < 41bp 0.803175550013519 0.458033563543251 0.55927384 0.255955 prediction 0.606351100027038 Functional Loss - CXCL8 ENSG00000169429 UTR3 Human protein_coding chr4:74608726 chr4:74608727 . . 0 22 hPsi_associated_SNPs_7160 0 0 1 0 0 exosome 0.438718592994627 0.438718187701474 0.11854768 0 hPsi_site_12577 iPseU_CNN:0.11854768;iRNA_PseU:0 12578 chr3 88205554 88205554 1 + T G UCEC 88205553 + 88205533 88205573 41 TTTGGGCATTTTTGAACAAATTTTTGGACTCATCCGCTGCC TTTGGGCATTTTTGAACAAATGTTTGGACTCATCCGCTGCC < 41bp 0.838643383724166 0.535490656970025 0.5057601 0.37593597 prediction 0.60630545350828 Functional Loss - C3orf38 ENSG00000179021 CDS Human protein_coding chr3:88205553 chr3:88205554 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7161 0 0 1 0 0 exosome 0.438718654501911 0.438718597647165 0.0115202000000001 0 hPsi_site_12578 iPseU_CNN:0.0115202000000001;iRNA_PseU:0 12579 chr13 103289544 103289544 1 + A G COAD 103289543 + 103289523 103289563 41 TCAATGTAGACACATAAACATACGTGTGGATCCCAGGGGCT TCAATGTAGACACATAAACATGCGTGTGGATCCCAGGGGCT < 41bp 0.803151532205978 0.381451216607238 0.7251447 0.30166823 prediction 0.606303064411957 Functional Loss - TPP2 ENSG00000134900 CDS Human protein_coding chr13:103289543 chr13:103289544 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_7162 0 0 1 0 1 Nucleus 0.438718520134982 0.438718592631305 0.4502894 0 hPsi_site_12579 iPseU_CNN:0.4502894;iRNA_PseU:0 12580 chr3 11060368 11060368 1 + A G COAD 11060367 + 11060347 11060387 41 CCTGGGCCATTTACTACCTGTACAACTCCTTCACCACGGTG CCTGGGCCATTTACTACCTGTGCAACTCCTTCACCACGGTG < 41bp 0.803137587505695 0.372089154799916 0.8290367 0.3815754 prediction 0.606275175011389 Functional Loss - SLC6A1 ENSG00000157103 CDS Human protein_coding chr3:11060367 chr3:11060368 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_7163 0 0 0 0 2 Endoplasmic reticulum 0.438718401304801 0.438718584764657 0.6580734 0 hPsi_site_12580 iPseU_CNN:0.6580734;iRNA_PseU:0 12581 chr2 73115544 73115544 1 + T G UCEC 73115543 + 73115523 73115563 41 ACCTCCATGCTCTGCCTGACTTCCAGCGTCCTGAAGGCCTT ACCTCCATGCTCTGCCTGACTGCCAGCGTCCTGAAGGCCTT < 41bp 0.803131868262789 0.468856767765404 0.32663494 0.116537035 prediction 0.606263736525577 Functional Loss - SPR ENSG00000116096 CDS Human protein_coding chr2:73115543 chr2:73115544 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_7164 0 0 1 0 0 Ribosome 0.438714855930744 0.438718152702273 0 0 hPsi_site_12581 iPseU_CNN:0;iRNA_PseU:0 12582 chr10 71868825 71868825 1 + T G COAD 71868824 + 71868804 71868844 41 CCAGTGGACTCGCAGCCAAATTTGTCATCCACTGTCACATC CCAGTGGACTCGCAGCCAAATGTGTCATCCACTGTCACATC < 41bp 0.85748356778054 0.554367884027057 0.66494673 0.6927441 prediction 0.606231367506967 Functional Loss - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71868824 chr10:71868825 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7165 0 0 1 1 1 Ribosome 0.438747236647137 0.436769850105324 0 0 hPsi_site_12582 iPseU_CNN:0;iRNA_PseU:0 12583 chr3 49569629 49569629 1 + A G STAD 49569628 + 49569608 49569648 41 ACAGCAACAGCCAGCTCATGTATGGCCTTCCCGACAGCAGC ACAGCAACAGCCAGCTCATGTGTGGCCTTCCCGACAGCAGC < 41bp 0.905696271666695 0.602583399531248 0.3880214 0.34716427 prediction 0.606225744270893 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569628 chr3:49569629 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_7166 0 0 1 0 0 Nucleus 0.438702828078951 0.438728904034119 0 0 hPsi_site_12583 iPseU_CNN:0;iRNA_PseU:0 12584 chr11 34164994 34164994 1 + A G BRCA 34164993 + 34164973 34165013 41 GTTCCCTTCTTTTTTTTAGATACATAATCCGTGGGGACGAT GTTCCCTTCTTTTTTTTAGATGCATAATCCGTGGGGACGAT < 41bp 0.803102698393482 0.38759385045126 0.67909986 0.26631182 prediction 0.606205396786964 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34164993 chr11:34164994 nonsynonymous SNV 0.114 4 22 hPsi_associated_SNPs_7167 0 0 1 0 2 chromatin 0.438714942344781 0.438718594476798 0.35819972 0 hPsi_site_12584 iPseU_CNN:0.35819972;iRNA_PseU:0 12585 chr11 88911375 88911375 1 + A G STAD 88911374 + 88911354 88911394 41 AGTCGTGGCCTTCCGTCTTTTATAATAGGACCTGCCAGTGC AGTCGTGGCCTTCCGTCTTTTGTAATAGGACCTGCCAGTGC < 41bp 0.91386404013819 0.610764327495811 0.39782467 0.25113663 prediction 0.606199425284757 Functional Loss - TYR ENSG00000077498 CDS Human protein_coding chr11:88911374 chr11:88911375 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_7168 0 0 0 0 0 unknown 0.438672500131753 0.438796880352395 0 0 hPsi_site_12585 iPseU_CNN:0;iRNA_PseU:0 12586 chr9 70881155 70881155 1 + A G rs533744180 70881154 + 70881134 70881174 41 AGGCAAGTTGCTTTGGCAGATATCATTCTCATTAATAAAAC AGGCAAGTTGCTTTGGCAGATGTCATTCTCATTAATAAAAC < 41bp 0.865432658407798 0.562341918815829 0.33632752 0.21835798 prediction 0.606181479183937 Functional Loss - CBWD3 ENSG00000196873 CDS Human protein_coding chr9:70881154 chr9:70881155 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_7169 0 0 0 0 2 Ribosome 0.438781274121322 0.438877759142618 0 0 hPsi_site_12586 iPseU_CNN:0;iRNA_PseU:0 12587 chr7 74191683 74191683 1 + A G KIRC 74191682 + 74191662 74191702 41 ACCGGCGCTTCACCGAGATCTACGAGTTCCATGTGAGTGTG ACCGGCGCTTCACCGAGATCTGCGAGTTCCATGTGAGTGTG < 41bp 0.803086201089702 0.37422077521111 0.6789062 0.25381136 prediction 0.606172402179404 Functional Loss - NCF1 ENSG00000158517 CDS Human protein_coding chr7:74191682 chr7:74191683 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7170 0 0 0 0 2 exosome 0.438913094823001 0.438283812586921 0.3578124 0 hPsi_site_12587 iPseU_CNN:0.3578124;iRNA_PseU:0 12588 chr11 134183882 134183882 1 + A G COAD 134183881 + 134183861 134183901 41 AACTCTTCCCTGGAGGGCTTTACCATCTATTCCCTGGAGAT AACTCTTCCCTGGAGGGCTTTGCCATCTATTCCCTGGAGAT < 41bp 0.803085358858888 0.3672567350755 0.5452385 0.24652591 prediction 0.606170717717776 Functional Loss - GLB1L3 ENSG00000166105 CDS Human protein_coding chr11:134183881 chr11:134183882 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_7171 0 0 0 0 2 Nucleus 0.438717887986808 0.438718592209123 0.0904769999999999 0 hPsi_site_12588 iPseU_CNN:0.0904769999999999;iRNA_PseU:0 12589 chr18 3457449 3457449 1 + T G UCEC 3457448 + 3457428 3457468 41 AGATCCAAATCAGTTCACAATTTCCCGCCGTGGGGCCAAGA AGATCCAAATCAGTTCACAATGTCCCGCCGTGGGGCCAAGA < 41bp 0.803084756625214 0.472891206482741 0.36693823 0.23966357 prediction 0.606169513250429 Functional Loss - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457448 chr18:3457449 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7172 0 0 1 0 1 Cytosol 0.438725764091945 0.43871859327229 0 0 hPsi_site_12589 iPseU_CNN:0;iRNA_PseU:0 12590 chr16 31927498 31927498 1 + A C LAML 31927497 + 31927477 31927517 41 AATGTGGCAAAGCCTTCAACTATAGGTCATACCTCACTACA AATGTGGCAAAGCCTTCAACTCTAGGTCATACCTCACTACA < 41bp 0.803081529590742 0.444037715994867 0.5505582 0.3067365 prediction 0.606163059181484 Functional Loss - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31927497 chr16:31927498 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_7173 0 0 1 0 0 chromatin 0.438863322037304 0.438681155312388 0.1011164 0 hPsi_site_12590 iPseU_CNN:0.1011164;iRNA_PseU:0 12591 chr7 98988630 98988630 1 + A G KIRP 98988629 + 98988609 98988649 41 CAGCAGTAGCTGCGGCTGGGTACATGGCGTCTGTTTCTCAG CAGCAGTAGCTGCGGCTGGGTGCATGGCGTCTGTTTCTCAG < 41bp 0.917279306065394 0.614229027514004 0.84247535 0.29888433 prediction 0.606100557102779 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98988629 chr7:98988630 synonymous SNV . 0 22 hPsi_associated_SNPs_7174 0 0 1 0 1 Cytosol 0.438718405086582 0.438718604718875 0.6849507 0 hPsi_site_12591 iPseU_CNN:0.6849507;iRNA_PseU:0 12592 chr14 31061628 31061628 1 + A G rs145527124 31061627 + 31061607 31061647 41 TGTGGACTTCAGAGAGAATGTATTTTCCAGTTTACTGGCAA TGTGGACTTCAGAGAGAATGTGTTTTCCAGTTTACTGGCAA < 41bp 0.803036390239064 0.401019566026258 0.40350187 0.25895274 prediction 0.606072780478127 Functional Loss - G2E3 ENSG00000092140 CDS Human protein_coding chr14:31061627 chr14:31061628 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7175 0 0 1 0 2 Cytosol 0.439250880054565 0.438672959951816 0 0 hPsi_site_12592 iPseU_CNN:0;iRNA_PseU:0 12593 chr1 229771779 229771779 1 + T G UCEC 229771778 + 229771758 229771798 41 GCCACGGTTGTTTGAAGAGGTTTTGGGGGTGATCTGTCGTC GCCACGGTTGTTTGAAGAGGTGTTGGGGGTGATCTGTCGTC < 41bp 0.803029017714938 0.467530449240857 0.5839947 0.28167403 prediction 0.606058035429876 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771778 chr1:229771779 synonymous SNV . 0 22 hPsi_associated_SNPs_7176 0 0 1 0 0 Nucleus 0.438717435468009 0.438988450123924 0.1679894 0 hPsi_site_12593 iPseU_CNN:0.1679894;iRNA_PseU:0 12594 chr22 42024181 42024181 1 + A G LUSC 42024180 + 42024160 42024200 41 TTGGTTGATGCCTCCAAGGCTATGTTTGAATCTCAGAGTGA TTGGTTGATGCCTCCAAGGCTGTGTTTGAATCTCAGAGTGA < 41bp 0.803025898904245 0.398857986842391 0.6611654 0.27039534 prediction 0.60605179780849 Functional Loss - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42024180 chr22:42024181 nonsynonymous SNV 0.973 2 22 hPsi_associated_SNPs_7177 0 0 1 0 2 Cytosol 0.43871674412469 0.438656506812182 0.3223308 0 hPsi_site_12594 iPseU_CNN:0.3223308;iRNA_PseU:0 12595 chr11 4661285 4661285 1 + A G rs905871 4661284 + 4661264 4661304 41 ATTGACCTAGTCCTCTCCTCTATCACCATGCCCAAGATGGC ATTGACCTAGTCCTCTCCTCTGTCACCATGCCCAAGATGGC < 41bp 0.905580460433695 0.602559925606506 0.42464823 0.32072082 prediction 0.606041069654377 Functional Loss - OR51D1 ENSG00000197428 CDS Human protein_coding chr11:4661284 chr11:4661285 nonsynonymous SNV 0.487 0 22 hPsi_associated_SNPs_7178 0 1 0 0 0 unknown 0.438718368361009 0.4387020791923 0 0 hPsi_site_12595 iPseU_CNN:0;iRNA_PseU:0 12596 chr14 23345368 23345368 1 + T C SKCM 23345367 + 23345347 23345387 41 GGCATTGCCAGCCTGGCAATTTCCGATGCCGGGACGAGAAG GGCATTGCCAGCCTGGCAATTCCCGATGCCGGGACGAGAAG < 41bp 0.802980620656315 0.499922994458765 0.5733937 0.21347836 prediction 0.605961241312631 Functional Loss - LRP10 ENSG00000197324 CDS Human protein_coding chr14:23345367 chr14:23345368 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_7179 0 0 1 0 0 Ribosome 0.438819541104575 0.438715550300285 0.1467874 0 hPsi_site_12596 iPseU_CNN:0.1467874;iRNA_PseU:0 12597 chr13 19920428 19920428 1 + A C rs543948491 19920427 + 19920407 19920447 41 AACTGCTGGCCGCCAAGGCCTATGTGCCTGGAAACCAGCAG AACTGCTGGCCGCCAAGGCCTCTGTGCCTGGAAACCAGCAG < 41bp 0.867114926262704 0.564140258436136 0.45581317 0.38867038 prediction 0.605949335653135 Functional Loss - LINC00421 ENSG00000236834 ncRNA_exonic Human lincRNA chr13:19920427 chr13:19920428 . . 0 22 hPsi_associated_SNPs_7180 0 0 0 0 0 unknown 0.438718591792823 0.438716576955573 0 0 hPsi_site_12597 iPseU_CNN:0;iRNA_PseU:0 12598 chr11 63525791 63525791 1 + T G UCEC 63525790 + 63525770 63525810 41 TGAGCCTGCATTCCAAGCTTTTTTTTTAATTTGGTGTTTTC TGAGCCTGCATTCCAAGCTTTGTTTTTAATTTGGTGTTTTC < 41bp 0.823285965600063 0.520312963891081 0.3107243 0.2924794 prediction 0.605946003417964 Functional Loss - RTN3 ENSG00000133318 CDS Human protein_coding chr11:63525790 chr11:63525791 nonsynonymous SNV 0.934 1 22 hPsi_associated_SNPs_7181 0 0 0 0 0 Endoplasmic reticulum 0.439384379253836 0.438719942904741 0 0 hPsi_site_12598 iPseU_CNN:0;iRNA_PseU:0 12599 chr7 99008722 99008722 1 + A G OV 99008721 + 99008701 99008741 41 TCCTGTGGAAGGAAAATGCCTAAAGTCAAAAGAAGCCGGAA TCCTGTGGAAGGAAAATGCCTGAAGTCAAAAGAAGCCGGAA < 41bp 0.802969869026131 0.377476596808241 0.31970465 0.2211859 prediction 0.605939738052263 Functional Loss - BUD31 ENSG00000106245 CDS Human protein_coding chr7:99008721 chr7:99008722 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7182 0 0 1 0 2 Ribosome 0.438718592927633 0.438718592994969 0 0 hPsi_site_12599 iPseU_CNN:0;iRNA_PseU:0 12600 chr14 21500100 21500100 1 + A G LIHC 21500099 + 21500079 21500119 41 GTTTGACAGACACCAGCAAGTACACCGGCACCCACAAGGAG GTTTGACAGACACCAGCAAGTGCACCGGCACCCACAAGGAG < 41bp 0.913794120701288 0.610835442903389 0.42678404 0.22310075 prediction 0.605917355595799 Functional Loss - TPPP2 ENSG00000179636 CDS Human protein_coding chr14:21500099 chr14:21500100 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7183 0 0 0 0 1 exosome 0.438777491210161 0.438719911021299 0 0 hPsi_site_12600 iPseU_CNN:0;iRNA_PseU:0 12601 chr11 55872980 55872980 1 + A G rs61734406 55872979 + 55872959 55872999 41 GCCTTATGTGATTGGCTTTATAGACTCCTTTGTCAACGTGG GCCTTATGTGATTGGCTTTATGGACTCCTTTGTCAACGTGG < 41bp 0.802929719903477 0.408607858497879 0.3262788 0.25513625 prediction 0.605859439806953 Functional Loss - OR8H2 ENSG00000181767 CDS Human protein_coding chr11:55872979 chr11:55872980 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_7184 0 0 0 0 0 unknown 0.438717617572238 0.438976672986152 0 0 hPsi_site_12601 iPseU_CNN:0;iRNA_PseU:0 12602 chr11 60170442 60170442 1 + A G UCEC 60170441 + 60170421 60170461 41 TTGGTTGCGATAACTGGGATTACTTTCACCATTCTCAGCTA TTGGTTGCGATAACTGGGATTGCTTTCACCATTCTCAGCTA < 41bp 0.802885534185322 0.445989462529848 0.61801744 0.2554105 prediction 0.605771068370644 Functional Loss - MS4A14 ENSG00000166928 CDS Human protein_coding chr11:60170441 chr11:60170442 nonsynonymous SNV 0.357 0 22 hPsi_associated_SNPs_7185 0 0 0 0 1 exosome 0.438128279429746 0.438690494075791 0.23603488 0 hPsi_site_12602 iPseU_CNN:0.23603488;iRNA_PseU:0 12603 chr10 104632936 104632936 1 + A G LUAD 104632935 + 104632915 104632955 41 ATGTGACTTTTATTCATGGCTACATTGAGAAGTTGGGAGAG ATGTGACTTTTATTCATGGCTGCATTGAGAAGTTGGGAGAG < 41bp 0.802879028057962 0.385078633070139 0.28226578 0.16700685 prediction 0.605758056115923 Functional Loss - AS3MT ENSG00000214435 CDS Human protein_coding chr10:104632935 chr10:104632936 nonsynonymous SNV 0.224 1 22 hPsi_associated_SNPs_7186 0 0 0 0 2 Nucleus 0.438881677463797 0.438840315661787 0 0 hPsi_site_12603 iPseU_CNN:0;iRNA_PseU:0 12604 chr15 43891392 43891392 1 + A G COAD 43891391 + 43891371 43891411 41 TGGTCATCGATGGAGTAAACTATTTGATTGATTGTGAACGG TGGTCATCGATGGAGTAAACTGTTTGATTGATTGTGAACGG < 41bp 0.802877087763822 0.393217055551308 0.43141955 0.50951976 prediction 0.605754175527644 Functional Loss - CKMT1B ENSG00000237289 CDS Human protein_coding chr15:43891391 chr15:43891392 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7187 0 0 0 0 1 Cytosol 0.411137346377405 0.424630060149378 0 0 hPsi_site_12604 iPseU_CNN:0;iRNA_PseU:0 12605 chr12 100042499 100042499 1 + A G STAD 100042498 + 100042478 100042518 41 CCAGTGGAGGCTTACAGTGATACCAGGGCTATCCTAGCTGG CCAGTGGAGGCTTACAGTGATGCCAGGGCTATCCTAGCTGG < 41bp 0.802872332635368 0.400947902690693 0.32124594 0.21047476 prediction 0.605744665270735 Functional Loss - FAM71C ENSG00000180219 CDS Human protein_coding chr12:100042498 chr12:100042499 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_7188 0 0 0 0 1 exosome 0.438718675295305 0.438717255381572 0 0 hPsi_site_12605 iPseU_CNN:0;iRNA_PseU:0 12606 chr5 76028164 76028164 1 + A G rs149168216 76028163 + 76028143 76028183 41 AAAAGCAACAAATGCCACCTTAGATCCCCGGTCATTTCTTC AAAAGCAACAAATGCCACCTTGGATCCCCGGTCATTTCTTC < 41bp 0.802845702289363 0.422316102804372 0.52918935 0.27833468 prediction 0.605691404578726 Functional Loss - F2R ENSG00000181104 CDS Human protein_coding chr5:76028163 chr5:76028164 synonymous SNV . 0 22 hPsi_associated_SNPs_7189 0 0 1 0 1 Endoplasmic reticulum 0.438718593066599 0.438718592995102 0.0583787 0 hPsi_site_12606 iPseU_CNN:0.0583787;iRNA_PseU:0 12607 chr3 132257385 132257385 1 + A C rs149506627 132257384 + 132257364 132257404 41 TGTAAGCACATTTGTTCCTTTATATCTGTTTACAAAACTGT TGTAAGCACATTTGTTCCTTTCTATCTGTTTACAAAACTGT < 41bp 0.802832769800845 0.475120494065998 0.2971159 0.24912474 prediction 0.605665539601689 Functional Loss - DNAJC13 ENSG00000138246 UTR3 Human protein_coding chr3:132257384 chr3:132257385 . . 0 22 hPsi_associated_SNPs_7190 0 0 0 7 0 Nucleus 0.438721090465363 0.438718745491529 0 0 hPsi_site_12607 iPseU_CNN:0;iRNA_PseU:0 12608 chr1 179312040 179312040 1 + A G LUAD 179312039 + 179312019 179312059 41 CAACCAGTATTTGTACTTCTTATTTGCTCCTACCCTTATCT CAACCAGTATTTGTACTTCTTGTTTGCTCCTACCCTTATCT < 41bp 0.802827960042777 0.378768486069586 0.6778077 0.30243665 prediction 0.605655920085553 Functional Loss - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179312039 chr1:179312040 synonymous SNV . 0 22 hPsi_associated_SNPs_7191 0 0 1 0 2 Ribosome 0.438146052173105 0.438341153883401 0.3556154 0 hPsi_site_12608 iPseU_CNN:0.3556154;iRNA_PseU:0 12609 chr19 32971316 32971316 1 + A G LUSC 32971315 + 32971295 32971335 41 CTTTTTGAAGGTTTATCAGATATATGCCAAGAGGGCACCAG CTTTTTGAAGGTTTATCAGATGTATGCCAAGAGGGCACCAG < 41bp 0.802818331981338 0.388949713256874 0.7381089 0.58662766 prediction 0.605636663962676 Functional Loss - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32971315 chr19:32971316 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_7192 0 0 1 0 1 cytosol 0.438678857834406 0.438409744450184 0.30296248 0 hPsi_site_12609 iPseU_CNN:0.30296248;iRNA_PseU:0 12610 chr1 236711362 236711362 1 + A G UCEC 236711361 + 236711341 236711381 41 CAAGGTTGCAGTAAATGGCGTACACAGCCTGGAGTACAAAC CAAGGTTGCAGTAAATGGCGTGCACAGCCTGGAGTACAAAC < 41bp 0.802804192374839 0.40040219991475 0.6224511 0.3138603 prediction 0.605608384749678 Functional Loss - LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236711361 chr1:236711362 synonymous SNV . 0 22 hPsi_associated_SNPs_7193 0 0 1 0 1 Cytosol 0.43847329173693 0.438740182906877 0.2449022 0 hPsi_site_12610 iPseU_CNN:0.2449022;iRNA_PseU:0 12611 chr15 89195526 89195526 1 + A C rs1137166 89195525 + 89195505 89195545 41 GGTGCTGAGTGAGCGCCTCCTACACAAGAGCATCCAGGTGA GGTGCTGAGTGAGCGCCTCCTCCACAAGAGCATCCAGGTGA < 41bp 0.802798011812093 0.436726945305276 0.34021387 0.15322241 prediction 0.605596023624187 Functional Loss - ISG20 ENSG00000172183 CDS Human protein_coding chr15:89195525 chr15:89195526 synonymous SNV . 0 22 hPsi_associated_SNPs_7194 0 0 0 0 1 Cytosol 0.438725194939205 0.438718592902891 0 0 hPsi_site_12611 iPseU_CNN:0;iRNA_PseU:0 12612 chr10 25314037 25314037 1 + A C SKCM 25314036 + 25314016 25314056 41 GGAGAGTGCCTAGCAGCTATTAACTCCACCTATAATACTTC GGAGAGTGCCTAGCAGCTATTCACTCCACCTATAATACTTC < 41bp 0.875647596718077 0.572862563770222 0.53873914 0.30830878 prediction 0.605570065895711 Functional Loss - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25314036 chr10:25314037 nonsynonymous SNV 0.098 0 22 hPsi_associated_SNPs_7195 0 0 1 0 0 Cytosol 0.438718579908609 0.438718913513748 0.07747828 0 hPsi_site_12612 iPseU_CNN:0.07747828;iRNA_PseU:0 12613 chr12 48919696 48919696 1 + A G LIHC 48919695 + 48919675 48919715 41 ACAGAGGAAAACCATTTCAGTAGAGGGCTGCCTGGCTCAGG ACAGAGGAAAACCATTTCAGTGGAGGGCTGCCTGGCTCAGG < 41bp 0.80277086348516 0.378002981966574 0.48437762 0.3328315 prediction 0.605541726970321 Functional Loss - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48919695 chr12:48919696 synonymous SNV . 0 22 hPsi_associated_SNPs_7196 0 0 0 0 0 unknown 0.438719274521447 0.438678498588844 0 0 hPsi_site_12613 iPseU_CNN:0;iRNA_PseU:0 12614 chr20 53208316 53208316 1 + A G LUAD 53208315 + 53208295 53208335 41 CTGCGGCGGTATGGACGTGATACTACGTGGTTCACTTTTGA CTGCGGCGGTATGGACGTGATGCTACGTGGTTCACTTTTGA < 41bp 0.802765480730652 0.377711542459575 0.6217848 0.21164548 prediction 0.605530961461304 Functional Loss - DOK5 ENSG00000101134 CDS Human protein_coding chr20:53208315 chr20:53208316 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_7197 0 0 0 0 1 exosome 0.438908351412913 0.438629677698603 0.2435696 0 hPsi_site_12614 iPseU_CNN:0.2435696;iRNA_PseU:0 12615 chr5 167812369 167812369 1 + A G STAD 167812368 + 167812348 167812388 41 TGGAGCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTC TGGAGCTTGCACAGCAGGAGTGCCAGCAACTGCATGCCGTC < 41bp 0.802761495016666 0.381389827283208 0.49351057 0.22725242 prediction 0.605522990033333 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167812368 chr5:167812369 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7198 0 0 0 0 1 Ribosome 0.43881395619617 0.438438197739191 0 0 hPsi_site_12615 iPseU_CNN:0;iRNA_PseU:0 12616 chrX 108779179 108779179 1 + A G UCEC 108779178 + 108779158 108779198 41 ACCAAAGAAGAAGTAACTATTATGAGGGGCCACACACCAGC ACCAAAGAAGAAGTAACTATTGTGAGGGGCCACACACCAGC < 41bp 0.80275463266872 0.404511630290744 0.71122044 0.71432614 prediction 0.605509265337439 Functional Loss - NXT2 ENSG00000101888 CDS Human protein_coding chrX:108779178 chrX:108779179 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_7199 0 0 0 0 1 Ribosome 0.438718049509179 0.438718296621456 0 0 hPsi_site_12616 iPseU_CNN:0;iRNA_PseU:0 Iron status biomarkers 12617 chr11 33308597 33308597 1 + A G UCEC 33308596 + 33308576 33308616 41 GGCACGTTTGGCCAGGTAGTTAAATGCTGGAAAAGAGGGAC GGCACGTTTGGCCAGGTAGTTGAATGCTGGAAAAGAGGGAC < 41bp 0.802736114636602 0.382343857322635 0.81295985 0.25795224 prediction 0.605472229273203 Functional Loss - HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33308596 chr11:33308597 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_7200 0 0 1 0 0 Cytosol 0.438718592913947 0.438719348888893 0.6259197 0 hPsi_site_12617 iPseU_CNN:0.6259197;iRNA_PseU:0 12618 chr15 34522088 34522088 1 + A C rs140570424 34522087 + 34522067 34522107 41 ATACTCTTAAACTAATCACTTATGTTAAAAAGAACCAAAAG ATACTCTTAAACTAATCACTTCTGTTAAAAAGAACCAAAAG < 41bp 0.844700523140249 0.541975173474289 0.40791634 0.2515194 prediction 0.605450699331919 Functional Loss - EMC4 ENSG00000128463 UTR3 Human protein_coding chr15:34522087 chr15:34522088 . . 0 22 hPsi_associated_SNPs_7201 0 0 1 0 0 Ribosome 0.43865858492933 0.438513629994866 0 0 hPsi_site_12618 iPseU_CNN:0;iRNA_PseU:0 12619 chr16 30525112 30525112 1 + A G LIHC 30525111 + 30525091 30525131 41 GCCAAGAAGACTCCACACTCTATGTCAGTTTCACCCCCAAA GCCAAGAAGACTCCACACTCTGTGTCAGTTTCACCCCCAAA < 41bp 0.802724093809399 0.364345022326053 0.24407068 0.26063505 prediction 0.605448187618798 Functional Loss - ITGAL ENSG00000005844 CDS Human protein_coding chr16:30525111 chr16:30525112 nonsynonymous SNV 0.975 3 22 hPsi_associated_SNPs_7202 0 0 0 0 2 Cytosol 0.438640635010122 0.43903276482756 0 0 hPsi_site_12619 iPseU_CNN:0;iRNA_PseU:0 12620 chr6 151790214 151790214 1 + A G STAD 151790213 + 151790193 151790233 41 GCTGGTGGACCACTGGAAAATATGGAATATTTCAGTACGAT GCTGGTGGACCACTGGAAAATGTGGAATATTTCAGTACGAT < 41bp 0.802721488435009 0.38721584038147 0.34016788 0.34033564 prediction 0.605442976870018 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151790213 chr6:151790214 nonsynonymous SNV 0.195 4 22 hPsi_associated_SNPs_7203 0 0 0 0 0 Ribosome 0.438718592995102 0.438718592995101 0 0 hPsi_site_12620 iPseU_CNN:0;iRNA_PseU:0 12621 chr5 40841500 40841500 1 + A G COAD 40841499 + 40841479 40841519 41 GGAACAATGGCTACCGAGAGTACTCCCTCAGAGATCATAGA GGAACAATGGCTACCGAGAGTGCTCCCTCAGAGATCATAGA < 41bp 0.802720167467628 0.408316796795558 0.5802033 0.29196328 prediction 0.605440334935255 Functional Loss - CARD6 ENSG00000132357 CDS Human protein_coding chr5:40841499 chr5:40841500 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_7204 0 0 0 0 0 exosome 0.438718530151357 0.438718575800581 0.1604066 0 hPsi_site_12621 iPseU_CNN:0.1604066;iRNA_PseU:0 12622 chr1 160718249 160718249 1 + A G UCEC 160718248 + 160718228 160718268 41 AGGGATCTACTATGTGGGGATATACAGCTCATCACTCCAGC AGGGATCTACTATGTGGGGATGTACAGCTCATCACTCCAGC < 41bp 0.906523256193694 0.603810180797999 0.6453096 0.32298228 prediction 0.605426150791389 Functional Loss - SLAMF7 ENSG00000026751 CDS Human protein_coding chr1:160718248 chr1:160718249 nonsynonymous SNV 0.004 3 22 hPsi_associated_SNPs_7205 0 0 0 0 1 exosome 0.438718687225696 0.438718561464855 0.2906192 0 hPsi_site_12622 iPseU_CNN:0.2906192;iRNA_PseU:0 12623 chr11 108018053 108018053 1 + A G COAD 108018052 + 108018032 108018072 41 ATGCCTTGAAGCAAGGAGAATACGGTCTTGCCAGTATTTGC ATGCCTTGAAGCAAGGAGAATGCGGTCTTGCCAGTATTTGC < 41bp 0.80270970767445 0.395612435615428 0.39825478 0.30425635 prediction 0.605419415348899 Functional Loss - ACAT1 ENSG00000075239 CDS Human protein_coding chr11:108018052 chr11:108018053 nonsynonymous SNV 0.973 3 22 hPsi_associated_SNPs_7206 0 0 1 0 1 Ribosome 0.438719581310364 0.438720580475171 0 0 hPsi_site_12623 iPseU_CNN:0;iRNA_PseU:0 12624 chr9 127572615 127572615 1 + A G UCEC 127572614 + 127572594 127572634 41 CCTACACCACCCAGATCGACTACAACCCCAAGGAGCGGGTG CCTACACCACCCAGATCGACTGCAACCCCAAGGAGCGGGTG < 41bp 0.802700846649845 0.381842372264736 0.884452 0.27195072 prediction 0.60540169329969 Functional Loss - OLFML2A ENSG00000185585 CDS Human protein_coding chr9:127572614 chr9:127572615 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_7207 0 0 0 0 0 Nucleus 0.438718592996148 0.438718582118733 0.768904 0 hPsi_site_12624 iPseU_CNN:0.768904;iRNA_PseU:0 12625 chr1 77763301 77763301 1 + T G UCEC 77763300 + 77763280 77763320 41 AAATTGCAGAACGATATGGATTCCAATACATTTCTGTGGGA AAATTGCAGAACGATATGGATGCCAATACATTTCTGTGGGA < 41bp 0.802689085955848 0.462882819955444 0.88596755 0.6447792 prediction 0.605378171911695 Functional Loss - AK5 ENSG00000154027 CDS Human protein_coding chr1:77763300 chr1:77763301 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_7208 0 0 0 0 1 Nucleus 0.438793806606796 0.420067148520333 0.4823767 0 hPsi_site_12625 iPseU_CNN:0.4823767;iRNA_PseU:0 12626 chr14 20248950 20248950 1 + A G LUSC 20248949 + 20248929 20248969 41 ATGGGGGGCTTCATTCATTCTATAATACAGGTGGCTCTCAT ATGGGGGGCTTCATTCATTCTGTAATACAGGTGGCTCTCAT < 41bp 0.899840858489959 0.597163586582426 0.64093494 0.42309886 prediction 0.605354543815067 Functional Loss - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20248949 chr14:20248950 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_7209 0 0 0 0 0 unknown 0.438718575016559 0.438718603826971 0.28186988 0 hPsi_site_12626 iPseU_CNN:0.28186988;iRNA_PseU:0 12627 chr16 30387499 30387499 1 + A G THYM 30387498 + 30387478 30387518 41 ATCGACCAGAACCGTGATGGTATTATAGACAAGGAGGACCT ATCGACCAGAACCGTGATGGTGTTATAGACAAGGAGGACCT < 41bp 0.802669832879488 0.375918576738297 0.72270685 0.37182522 prediction 0.605339665758976 Functional Loss - MYLPF ENSG00000180209 CDS Human protein_coding chr16:30387498 chr16:30387499 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7210 0 0 0 0 2 exosome 0.438718628966402 0.438718655004617 0.4454137 0 hPsi_site_12627 iPseU_CNN:0.4454137;iRNA_PseU:0 12628 chr2 220284860 220284860 1 + T G UCEC 220284859 + 220284839 220284879 41 AAGGAAGAAGCAGAGAACAATTTGGCTGCCTTCCGAGCGGT AAGGAAGAAGCAGAGAACAATGTGGCTGCCTTCCGAGCGGT < 41bp 0.802663521039653 0.465133334082281 0.5893909 0.29032862 prediction 0.605327042079306 Functional Loss - DES ENSG00000175084 CDS Human protein_coding chr2:220284859 chr2:220284860 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7211 0 0 0 0 2 nucleus 0.438718592994969 0.438718615306444 0.1787818 0 hPsi_site_12628 iPseU_CNN:0.1787818;iRNA_PseU:0 12629 chr12 52448549 52448549 1 + T G STAD 52448548 + 52448528 52448568 41 CGTCGCCCTCCACGCCCAGCTTCCAGCCGCCCCAGCTCTCT CGTCGCCCTCCACGCCCAGCTGCCAGCCGCCCCAGCTCTCT < 41bp 0.860536974916477 0.557875433431455 0.5540951 0.22558364 prediction 0.605323082970046 Functional Loss - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52448548 chr12:52448549 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_7212 0 0 1 0 0 Endoplasmic reticulum 0.438718705524583 0.438718622268119 0.1081902 0 hPsi_site_12629 iPseU_CNN:0.1081902;iRNA_PseU:0 12630 chr10 118960771 118960771 1 + T G UCEC 118960770 + 118960750 118960790 41 TCCTTCCTGAGCTCGCTCTTTTTCTGCTGCACGGTGTTCAG TCCTTCCTGAGCTCGCTCTTTGTCTGCTGCACGGTGTTCAG < 41bp 0.802659304851349 0.473032642453733 0.37038755 0.21706405 prediction 0.605318609702698 Functional Loss - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118960770 chr10:118960771 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_7213 0 0 0 0 1 unknown 0.43871588140415 0.44118166639421 0 0 hPsi_site_12630 iPseU_CNN:0;iRNA_PseU:0 12631 chr1 215785202 215785202 1 + A G LUSC 215785201 + 215785181 215785221 41 CGAGACGATCAACAGGTGTTTATCCAGAAAGTTGTTCCCAT CGAGACGATCAACAGGTGTTTGTCCAGAAAGTTGTTCCCAT < 41bp 0.802651790797225 0.379240114844683 0.60975885 0.34091145 prediction 0.605303581594451 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215785201 chr1:215785202 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_7214 0 0 1 0 2 Ribosome 0.438720724871452 0.438724826485442 0.2195177 0 hPsi_site_12631 iPseU_CNN:0.2195177;iRNA_PseU:0 12632 chr6 32609312 32609312 1 + A C rs1129808 32609311 + 32609291 32609331 41 TGAACATCATGATTAAACGCTACAACTCTACCGCTGCTACC TGAACATCATGATTAAACGCTCCAACTCTACCGCTGCTACC < 41bp 0.802643161761463 0.429012080592573 0.68138224 0.3402065 prediction 0.605286323522925 Functional Loss - HLA-DQA1 ENSG00000196735 CDS Human protein_coding chr6:32609311 chr6:32609312 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_7215 0 0 0 1 1 exosome 0.438720177517086 0.438718926048032 0.36276448 0 hPsi_site_12632 iPseU_CNN:0.36276448;iRNA_PseU:0 12633 chr11 129727278 129727278 1 + T G STAD 129727277 + 129727257 129727297 41 AGGATGATGCCAACCTCATGTTCATCACCATGTGCTTCTGC AGGATGATGCCAACCTCATGTGCATCACCATGTGCTTCTGC < 41bp 0.860166789497319 0.557527465091621 0.7017205 0.51065946 prediction 0.605278648811396 Functional Loss - TMEM45B ENSG00000151715 CDS Human protein_coding chr11:129727277 chr11:129727278 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7216 0 0 1 0 2 Ribosome 0.438924965220741 0.438663971891611 0.38212208 0 hPsi_site_12633 iPseU_CNN:0.38212208;iRNA_PseU:0 12634 chr8 123965670 123965670 1 + T G UCEC 123965669 + 123965649 123965689 41 TGCAAAAAGTCAAGAACAGGTTCATCTCCTGAGGAGCACGT TGCAAAAAGTCAAGAACAGGTGCATCTCCTGAGGAGCACGT < 41bp 0.802621477308023 0.476816980201995 0.6516274 0.40887266 prediction 0.605242954616046 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965669 chr8:123965670 synonymous SNV . 0 22 hPsi_associated_SNPs_7217 0 0 0 0 0 Nucleus 0.438721416869058 0.438705856441203 0.3032548 0 hPsi_site_12634 iPseU_CNN:0.3032548;iRNA_PseU:0 12635 chr1 161697151 161697151 1 + T G rs542774231 161697150 + 161697130 161697170 41 CGGTGTCCAGATCGGTCCCGTTGGTCACCTCCGTCCGGAAC CGGTGTCCAGATCGGTCCCGTGGGTCACCTCCGTCCGGAAC < 41bp 0.821319893145329 0.51870678256766 0.29688442 0.28635404 prediction 0.605226221155339 Functional Loss - FCRLB ENSG00000162746 CDS Human protein_coding chr1:161697150 chr1:161697151 nonsynonymous SNV 0.034 1 22 hPsi_associated_SNPs_7218 0 0 0 1 0 Endoplasmic reticulum 0.43873228380249 0.43856917569155 0 0 hPsi_site_12635 iPseU_CNN:0;iRNA_PseU:0 12636 chr16 68293349 68293349 1 + A G LUSC 68293348 + 68293328 68293368 41 TCCCCACACCAGACTCCTTCTACTATGAGAGCTTCCCTGAC TCCCCACACCAGACTCCTTCTGCTATGAGAGCTTCCCTGAC < 41bp 0.802610916110402 0.373829798695486 0.3543283 0.22204891 prediction 0.605221832220805 Functional Loss - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68293348 chr16:68293349 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7219 0 0 1 0 0 Ribosome 0.438706044115837 0.438699820820796 0 0 hPsi_site_12636 iPseU_CNN:0;iRNA_PseU:0 12637 chr17 27001588 27001588 1 + T G UCEC 27001587 + 27001567 27001607 41 ACCGCCTGGAGGATGATGATTTTGACCTCATTGAGGAGAAT ACCGCCTGGAGGATGATGATTGTGACCTCATTGAGGAGAAT < 41bp 0.802604939217161 0.461343664722479 0.54666114 0.27151832 prediction 0.605209878434322 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27001587 chr17:27001588 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7220 0 0 1 0 2 Cytosol 0.438723620762009 0.437114117805899 0.09332228 0 hPsi_site_12637 iPseU_CNN:0.09332228;iRNA_PseU:0 12638 chr6 74119031 74119031 1 + T G UCEC 74119030 + 74119010 74119050 41 GAACCCCAGATAATGAAGATTTTGTTAGATGTGCGCCCAGA GAACCCCAGATAATGAAGATTGTGTTAGATGTGCGCCCAGA < 41bp 0.856884662643224 0.55428894201537 0.26672465 0.24199483 prediction 0.605191441255707 Functional Loss - DDX43 ENSG00000080007 CDS Human protein_coding chr6:74119030 chr6:74119031 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7221 0 0 0 0 2 exosome 0.438725795742716 0.438726474758955 0 0 hPsi_site_12638 iPseU_CNN:0;iRNA_PseU:0 12639 chr6 161513105 161513105 1 + A G OV 161513104 + 161513084 161513124 41 CAGAAGATAGGAGACAAATATATAAGCTTTGCCCGGAAGTG CAGAAGATAGGAGACAAATATGTAAGCTTTGCCCGGAAGTG < 41bp 0.8025632590479 0.379528764096346 0.39292526 0.34651887 prediction 0.605126518095801 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161513104 chr6:161513105 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_7222 0 0 1 2 2 Cytosol 0.438718319062132 0.438714355698537 0 0 hPsi_site_12639 iPseU_CNN:0;iRNA_PseU:0 12640 chr1 207497997 207497997 1 + A G PAAD 207497996 + 207497976 207498016 41 CAGTCGGTACTGTTGTGGAATATGAGTGCCGTCCAGGTTAC CAGTCGGTACTGTTGTGGAATGTGAGTGCCGTCCAGGTTAC < 41bp 0.802561289112452 0.385520952123176 0.33357245 0.2817964 prediction 0.605122578224905 Functional Loss - CD55 ENSG00000196352 CDS Human protein_coding chr1:207497996 chr1:207497997 nonsynonymous SNV 0.604 4 22 hPsi_associated_SNPs_7223 0 0 1 0 1 Endoplasmic reticulum 0.438716332038466 0.438699860580795 0 0 hPsi_site_12640 iPseU_CNN:0;iRNA_PseU:0 12641 chr1 116941598 116941598 1 + A C UCEC 116941597 + 116941577 116941617 41 GAAATCCATTGCTTATACCTTAACCAGTAACATTCCCGAGA GAAATCCATTGCTTATACCTTCACCAGTAACATTCCCGAGA < 41bp 0.802560432095052 0.425321780515906 0.4318055 0.2929712 prediction 0.605120864190104 Functional Loss - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116941597 chr1:116941598 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_7224 0 0 1 0 1 Nucleus 0.438657180416404 0.438746018995484 0 0 hPsi_site_12641 iPseU_CNN:0;iRNA_PseU:0 12642 chr1 147087640 147087640 1 + A G SKCM 147087639 + 147087619 147087659 41 TTGAAGGGCCAGGTTGAAACTATCGTCTCTTTCCACATCCA TTGAAGGGCCAGGTTGAAACTGTCGTCTCTTTCCACATCCA < 41bp 0.911809572271017 0.609305508988293 0.646433 0.3345997 prediction 0.605008126565448 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147087639 chr1:147087640 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7225 0 0 1 0 2 Nucleus 0.438718544544608 0.438718566690851 0.292866 0 hPsi_site_12642 iPseU_CNN:0.292866;iRNA_PseU:0 12643 chr6 50786681 50786681 1 + A C LUAD 50786680 + 50786660 50786700 41 ATGTCAAGTACGAAGATATCTATGAGGTGAGTCGACACCCC ATGTCAAGTACGAAGATATCTCTGAGGTGAGTCGACACCCC < 41bp 0.802493677631384 0.44498018016695 0.63287604 0.42283157 prediction 0.604987355262768 Functional Loss - TFAP2B ENSG00000008196 CDS Human protein_coding chr6:50786680 chr6:50786681 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_7226 0 0 0 0 1 Endoplasmic reticulum 0.43387144553631 0.438718287126587 0.26575208 0 hPsi_site_12643 iPseU_CNN:0.26575208;iRNA_PseU:0 12644 chr10 18282175 18282175 1 + A C UCEC 18282174 + 18282154 18282194 41 TCTTGCACTCAACTCTGAATTAAGTGACCAGGCAGGCAGAG TCTTGCACTCAACTCTGAATTCAGTGACCAGGCAGGCAGAG < 41bp 0.802466407215926 0.422749790536395 0.35062814 0.229132 prediction 0.604932814431851 Functional Loss - SLC39A12 ENSG00000148482 CDS Human protein_coding chr10:18282174 chr10:18282175 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_7227 0 0 0 0 3 exosome 0.438688704550073 0.438714768850309 0 0 hPsi_site_12644 iPseU_CNN:0;iRNA_PseU:0 12645 chr3 186572087 186572087 1 + T C BLCA 186572088 - 186572068 186572108 41 ACACTGAATGCTGAGCGGTATACATAGGCACCTTCTCCAGG ACACTGAATGCTGAGCGGTATGCATAGGCACCTTCTCCAGG < 41bp 0.897764988135659 0.595301574548255 0.8394692 0.7425407 prediction 0.604926827174807 Functional Loss - ADIPOQ ENSG00000181092 CDS Human protein_coding chr3:186572088 chr3:186572087 nonsynonymous SNV 0.934 1 22 hPsi_associated_SNPs_7228 0 0 0 0 0 exosome 0.438713156785553 0.438720370910151 0.193857 0 hPsi_site_12645 iPseU_CNN:0.193857;iRNA_PseU:0 12646 chr17 34894027 34894027 1 + A G STAD 34894026 + 34894006 34894046 41 ATCTCTTTACGTAGTTCAAGTAAATGTAGAAGCAGTATCTC ATCTCTTTACGTAGTTCAAGTGAATGTAGAAGCAGTATCTC < 41bp 0.802458389611061 0.394274240482592 0.292996 0.20239234 prediction 0.604916779222122 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34894026 chr17:34894027 synonymous SNV . 0 22 hPsi_associated_SNPs_7229 0 0 1 0 0 Ribosome 0.438718592548034 0.438718594580837 0 0 hPsi_site_12646 iPseU_CNN:0;iRNA_PseU:0 12647 chr9 91090162 91090162 1 + T G UCEC 91090161 + 91090141 91090181 41 GTTTGATGATGATTTCCATATTTATGTCTACGATTTGGTGA GTTTGATGATGATTTCCATATGTATGTCTACGATTTGGTGA < 41bp 0.836617924934309 0.53417157886059 0.53185266 0.44706228 prediction 0.604892692147439 Functional Loss - SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91090161 chr9:91090162 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7230 0 0 1 0 0 Cytosol 0.438779914350247 0.438744147396718 0.06370532 0 hPsi_site_12647 iPseU_CNN:0.06370532;iRNA_PseU:0 12648 chr13 41932539 41932539 1 + A G CESC 41932538 + 41932518 41932558 41 AGTATTCTTTGGCTTTGGATTATATTAATGCTGCAATTGCT AGTATTCTTTGGCTTTGGATTGTATTAATGCTGCAATTGCT < 41bp 0.905924059787626 0.603484178421021 0.5101902 0.26685128 prediction 0.604879762733209 Functional Loss - NAA16 ENSG00000172766 CDS Human protein_coding chr13:41932538 chr13:41932539 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7231 0 0 1 13 2 chromatin 0.438726949305646 0.438913689978684 0.0203804000000001 0 hPsi_site_12648 iPseU_CNN:0.0203804000000001;iRNA_PseU:0 12649 chr11 111835289 111835289 1 + A G ESCA 111835288 + 111835268 111835308 41 TCCAGCAACAGCTGCAGGCCTATGTGGCCTGGGTGAATGCA TCCAGCAACAGCTGCAGGCCTGTGTGGCCTGGGTGAATGCA < 41bp 0.802438591924923 0.380738974756995 0.26989394 0.22914585 prediction 0.604877183849846 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111835288 chr11:111835289 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_7232 0 0 1 0 1 Ribosome 0.438668694505649 0.438718657714688 0 0 hPsi_site_12649 iPseU_CNN:0;iRNA_PseU:0 12650 chr12 50232562 50232562 1 + A C UCEC 50232563 - 50232543 50232583 41 AAGCCAATTTGGACGTTCAGTTTTTGACATTGGCTTCTGCA AAGCCAATTTGGACGTTCAGTGTTTGACATTGGCTTCTGCA < 41bp 0.835360768973473 0.532933075539765 0.33172926 0.28335527 prediction 0.604855386867418 Functional Loss - BCDIN3D ENSG00000186666 CDS Human protein_coding chr12:50232563 chr12:50232562 synonymous SNV . 0 22 hPsi_associated_SNPs_7233 0 0 0 0 0 Ribosome 0.438720316259655 0.438711388569091 0 0 hPsi_site_12650 iPseU_CNN:0;iRNA_PseU:0 12651 chr1 26524839 26524839 1 + A G LGG 26524838 + 26524818 26524858 41 GCCCAAGCATTTCCAGAACATACAGGTTGCGCTGTACACCC GCCCAAGCATTTCCAGAACATGCAGGTTGCGCTGTACACCC < 41bp 0.802424576100115 0.365156946373335 0.33674955 0.23477069 prediction 0.60484915220023 Functional Loss - CATSPER4 ENSG00000188782 CDS Human protein_coding chr1:26524838 chr1:26524839 nonsynonymous SNV 0.811 1 22 hPsi_associated_SNPs_7234 0 0 0 0 3 exosome 0.438574462084397 0.438700199016505 0 0 hPsi_site_12651 iPseU_CNN:0;iRNA_PseU:0 12652 chr19 44740078 44740078 1 + A G STAD 44740077 + 44740057 44740097 41 TATAAATGTAAGGAGTGTGGTAAGGGCTTCAGTCAGGCTTC TATAAATGTAAGGAGTGTGGTGAGGGCTTCAGTCAGGCTTC < 41bp 0.802383904535553 0.391308451384694 0.43667305 0.24332398 prediction 0.604767809071106 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44740077 chr19:44740078 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_7235 0 0 1 0 0 cytosol 0.438718592995101 0.438718592996604 0 0 hPsi_site_12652 iPseU_CNN:0;iRNA_PseU:0 12653 chr17 40840945 40840945 1 + T C OV 40840944 + 40840924 40840964 41 GCCACTCCAACCAGACGGCATTCCATGGCTGCATGGAGCTG GCCACTCCAACCAGACGGCATCCCATGGCTGCATGGAGCTG < 41bp 0.817919547830221 0.515551515976435 0.40920043 0.26594588 prediction 0.604736063707571 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40840944 chr17:40840945 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_7236 0 0 0 0 1 Cytosol 0.438729951511647 0.438718605645915 0 0 hPsi_site_12653 iPseU_CNN:0;iRNA_PseU:0 12654 chr1 95357963 95357963 1 + T G UCEC 95357962 + 95357942 95357982 41 TACTTAGTAGCCCATAGTTTTTTATCTGTGTTTGAAACTGT TACTTAGTAGCCCATAGTTTTGTATCTGTGTTTGAAACTGT < 41bp 0.802367519317442 0.473661794943398 0.34762347 0.29474646 prediction 0.604735038634884 Functional Loss - SLC44A3 ENSG00000143036 CDS Human protein_coding chr1:95357962 chr1:95357963 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_7237 0 0 0 0 0 membrane 0.438718674704045 0.438718038732283 0 0 hPsi_site_12654 iPseU_CNN:0;iRNA_PseU:0 12655 chr22 24579121 24579121 1 + T G UCS 24579120 + 24579100 24579140 41 TTGGCACCTGCTGCTTGGATTTCCGGGACTTCTGCCTGGAG TTGGCACCTGCTGCTTGGATTGCCGGGACTTCTGCCTGGAG < 41bp 0.842420899634651 0.540075117078708 0.61706704 0.29226208 prediction 0.604691565111885 Functional Loss - SUSD2 ENSG00000099994 CDS Human protein_coding chr22:24579120 chr22:24579121 nonsynonymous SNV 0.183 1 22 hPsi_associated_SNPs_7238 0 0 1 0 1 Exosome 0.438718598415543 0.438718593361651 0.23413408 0 hPsi_site_12655 iPseU_CNN:0.23413408;iRNA_PseU:0 12656 chr9 130127640 130127640 1 + A G BLCA 130127639 + 130127619 130127659 41 AAGCTGGTTTGCTGTTGTGTTACAACTGTAAGTTAAGGATG AAGCTGGTTTGCTGTTGTGTTGCAACTGTAAGTTAAGGATG < 41bp 0.802344897385147 0.387328088222271 0.3173057 0.24805129 prediction 0.604689794770295 Functional Loss - GARNL3 ENSG00000136895 CDS Human protein_coding chr9:130127639 chr9:130127640 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_7239 0 0 1 0 2 Nucleus 0.438113785529237 0.439907068616048 0 0 hPsi_site_12656 iPseU_CNN:0;iRNA_PseU:0 12657 chr1 242045274 242045274 1 + A G UCEC 242045273 + 242045253 242045293 41 AAGTGACCAGACCTCCAAGCTACGTTTATCTCATTTCTCAA AAGTGACCAGACCTCCAAGCTGCGTTTATCTCATTTCTCAA < 41bp 0.802343229421869 0.388592654992634 0.6586243 0.26165068 prediction 0.604686458843738 Functional Loss - EXO1 ENSG00000174371 CDS Human protein_coding chr1:242045273 chr1:242045274 synonymous SNV . 0 22 hPsi_associated_SNPs_7240 0 0 1 0 2 Nucleus 0.440208630803822 0.438721194290722 0.3172486 0 hPsi_site_12657 iPseU_CNN:0.3172486;iRNA_PseU:0 12658 chr18 48473427 48473427 1 + A G STAD 48473426 + 48473406 48473446 41 CTAATAAAATGGCTTTCCGATACCCAGAACCTGAAGACAAG CTAATAAAATGGCTTTCCGATGCCCAGAACCTGAAGACAAG < 41bp 0.802341939606453 0.399253797341628 0.764783 0.28047758 prediction 0.604683879212906 Functional Loss - ME2 ENSG00000082212 CDS Human protein_coding chr18:48473426 chr18:48473427 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_7241 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995102 0.529566 0 hPsi_site_12658 iPseU_CNN:0.529566;iRNA_PseU:0 12659 chr8 56708582 56708582 1 + A G rs61753686 56708581 + 56708561 56708601 41 TCATCGGCAGGTCAGGTATTTAGAGAAGAATGTGAAGCTTA TCATCGGCAGGTCAGGTATTTGGAGAAGAATGTGAAGCTTA < 41bp 0.802324080220453 0.37598432376379 0.68324375 0.28663492 prediction 0.604648160440905 Functional Loss - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56708581 chr8:56708582 synonymous SNV . 0 22 hPsi_associated_SNPs_7242 0 0 0 0 1 Nucleus 0.438724487536335 0.43871495025385 0.3664875 0 hPsi_site_12659 iPseU_CNN:0.3664875;iRNA_PseU:0 12660 chr1 182797955 182797955 1 + T G UCEC 182797954 + 182797934 182797974 41 TGCAGAAAGCCTCCAGGGAGTTTACTGATAGTGCTGAAGCT TGCAGAAAGCCTCCAGGGAGTGTACTGATAGTGCTGAAGCT < 41bp 0.840809742644144 0.538508346892619 0.2747532 0.21273893 prediction 0.604602791503049 Functional Loss - NPL ENSG00000135838 CDS Human protein_coding chr1:182797954 chr1:182797955 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_7243 0 0 0 1 1 Cytosol 0.437249225118526 0.441257701063294 0 0 hPsi_site_12660 iPseU_CNN:0;iRNA_PseU:0 12661 chr3 112715755 112715755 1 + T G UCEC 112715754 + 112715734 112715774 41 TATAGCTTGAAGAGAACATTTTTATTAGTGGATAGCGTTGT TATAGCTTGAAGAGAACATTTGTATTAGTGGATAGCGTTGT < 41bp 0.80229993371602 0.469086963935016 0.2382522 0.27167547 prediction 0.60459986743204 Functional Loss - GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112715754 chr3:112715755 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7244 0 0 1 0 2 Ribosome 0.438710905473377 0.439203605886239 0 0 hPsi_site_12661 iPseU_CNN:0;iRNA_PseU:0 12662 chr8 90914272 90914272 1 + A G rs2250670 90914271 + 90914251 90914291 41 GGTTTGGTGAGTCCTCCAGGTAACTGTGATGCGGGGGTCAG GGTTTGGTGAGTCCTCCAGGTGACTGTGATGCGGGGGTCAG < 41bp 0.802283220467489 0.408184199524139 0.68524563 0.3180899 prediction 0.604566440934978 Functional Loss - OSGIN2 ENSG00000164823 UTR5 Human protein_coding chr8:90914271 chr8:90914272 . . 0 22 hPsi_associated_SNPs_7245 0 0 0 0 1 Cytosol 0.438719394271204 0.438653512543395 0.37049126 0 hPsi_site_12662 iPseU_CNN:0.37049126;iRNA_PseU:0 12663 chr16 31501722 31501722 1 + A G rs61741237 31501721 + 31501701 31501741 41 GTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGC GTGGGCAGTCCTCCGCCCCTTGCCCAGGAGGAGGCAGCGGC < 41bp 0.90923481198418 0.606970910815953 0.41415462 0.28371102 prediction 0.604527802336454 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31501721 chr16:31501722 nonsynonymous SNV 0.048 1 22 hPsi_associated_SNPs_7246 1 0 0 0 1 exosome 0.438718593034044 0.438718592995101 0 0 hPsi_site_12663 iPseU_CNN:0;iRNA_PseU:0 12664 chr1 93303114 93303114 1 + A G rs11540832 93303113 + 93303093 93303133 41 ATGTTGCAGATTACATGCGCTACTTAATGGAAGAAGATGAA ATGTTGCAGATTACATGCGCTGCTTAATGGAAGAAGATGAA < 41bp 0.80223806613338 0.381892764893905 0.31758672 0.19152492 prediction 0.60447613226676 Functional Loss - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93303113 chr1:93303114 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_7247 2 0 1 1 1 Cytosol 0.441042850807221 0.454646273610416 0 0 hPsi_site_12664 iPseU_CNN:0;iRNA_PseU:0 12665 chr9 86617489 86617489 1 + A G rs148663552 86617488 + 86617468 86617508 41 AGTTCTGGTGGTATTTGGAGTATAACTGCAAAGGTGTCTGA AGTTCTGGTGGTATTTGGAGTGTAACTGCAAAGGTGTCTGA < 41bp 0.802217138284485 0.408074954449819 0.42571566 0.25597182 prediction 0.60443427656897 Functional Loss - RMI1 ENSG00000178966 CDS Human protein_coding chr9:86617488 chr9:86617489 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_7248 0 0 1 0 0 Cytosol 0.438718662999611 0.438726584607294 0 0 hPsi_site_12665 iPseU_CNN:0;iRNA_PseU:0 12666 chr2 103281748 103281748 1 + T G STAD 103281747 + 103281727 103281767 41 GTGATCGAGCCACTGTTTGTTTTCCTGTACAGTTATTTGTC GTGATCGAGCCACTGTTTGTTGTCCTGTACAGTTATTTGTC < 41bp 0.843083880453235 0.540867478003614 0.41131726 0.19769502 prediction 0.60443280489924 Functional Loss - SLC9A2 ENSG00000115616 CDS Human protein_coding chr2:103281747 chr2:103281748 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_7249 0 0 0 0 1 Ribosome 0.438719693471971 0.438718594828493 0 0 hPsi_site_12666 iPseU_CNN:0;iRNA_PseU:0 12667 chr17 55867040 55867040 1 + A C rs9912353 55867039 + 55867019 55867059 41 CTCCAAACAAGCTCTCAGGTTATGCCACTGGAAGTATATTA CTCCAAACAAGCTCTCAGGTTCTGCCACTGGAAGTATATTA < 41bp 0.807186331755578 0.504989025378426 0.30588418 0.26926804 prediction 0.604394612754305 Functional Loss - CCDC182;MRPS23 ENSG00000222976 ncRNA_exonic Human misc_RNA chr17:55867039 chr17:55867040 . . 0 22 hPsi_associated_SNPs_7250 0 0 0 0 0 unknown 0.438718086585503 0.438922860213461 0 0 hPsi_site_12667 iPseU_CNN:0;iRNA_PseU:0 Breast cancer 12668 chr1 76255705 76255705 1 + A G rs182467474 76255704 + 76255684 76255724 41 TGTGGAATATGTTAAAGGTCTACAGAAAGAAGATGGTTCTT TGTGGAATATGTTAAAGGTCTGCAGAAAGAAGATGGTTCTT < 41bp 0.802166173193356 0.410778128838167 0.31898576 0.2959902 prediction 0.604332346386711 Functional Loss - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255704 chr1:76255705 synonymous SNV . 0 22 hPsi_associated_SNPs_7251 0 0 1 0 2 Nucleus 0.438698953843184 0.43903338148064 0 0 hPsi_site_12668 iPseU_CNN:0;iRNA_PseU:0 12669 chr15 102346232 102346232 1 + A G LGG 102346231 + 102346211 102346251 41 TGTGTAGTTCAGATCTTCTTTATCCATGCAGTTGGGGGAAC TGTGTAGTTCAGATCTTCTTTGTCCATGCAGTTGGGGGAAC < 41bp 0.896119415815726 0.593979663046741 0.2499285 0.24680474 prediction 0.60427950553797 Functional Loss - OR4F6 ENSG00000184140 CDS Human protein_coding chr15:102346231 chr15:102346232 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_7252 0 0 0 0 0 unknown 0.438718846407604 0.438718541241039 0 0 hPsi_site_12669 iPseU_CNN:0;iRNA_PseU:0 12670 chr12 65082110 65082110 1 + A G STAD 65082109 + 65082089 65082129 41 AGTAGCAATGGCTGTATGAATACACTTCATATCAGCAGCAC AGTAGCAATGGCTGTATGAATGCACTTCATATCAGCAGCAC < 41bp 0.90855549109802 0.606468804449155 0.54827255 0.2544397 prediction 0.604173373297732 Functional Loss - RASSF3 ENSG00000153179 CDS Human protein_coding chr12:65082109 chr12:65082110 nonsynonymous SNV 0.950 2 22 hPsi_associated_SNPs_7253 0 0 1 0 0 chromatin 0.422221777095358 0.422966634722249 0.0965450999999999 0 hPsi_site_12670 iPseU_CNN:0.0965450999999999;iRNA_PseU:0 12671 chr17 57743957 57743957 1 + A G LUSC 57743956 + 57743936 57743976 41 ATTAGAACATTTCACTGATTTATATGATATAAAACGTGCAG ATTAGAACATTTCACTGATTTGTATGATATAAAACGTGCAG < 41bp 0.80208652396847 0.387599162500179 0.26175743 0.23878935 prediction 0.604173047936939 Functional Loss - CLTC ENSG00000141367 CDS Human protein_coding chr17:57743956 chr17:57743957 synonymous SNV . 0 22 hPsi_associated_SNPs_7254 0 0 1 0 1 Nucleus 0.438718879037589 0.438718776912212 0 0 hPsi_site_12671 iPseU_CNN:0;iRNA_PseU:0 12672 chr1 79128478 79128478 1 + A G LUSC 79128477 + 79128457 79128497 41 TGAGTGGGAGCTGGACCCTGTAAAGGATGTTCTAATTCTTT TGAGTGGGAGCTGGACCCTGTGAAGGATGTTCTAATTCTTT < 41bp 0.802071260281443 0.393950895663068 0.8016349 0.4971612 prediction 0.604142520562886 Functional Loss - IFI44 ENSG00000137965 CDS Human protein_coding chr1:79128477 chr1:79128478 synonymous SNV . 0 22 hPsi_associated_SNPs_7255 0 0 0 0 2 exosome 0.438718612456644 0.43871858693896 0.6032698 0 hPsi_site_12672 iPseU_CNN:0.6032698;iRNA_PseU:0 12673 chr3 167508188 167508188 1 + T G UCEC 167508187 + 167508167 167508207 41 ATTTTCTTTCTTGAAGGAGTTTTCAAACATGGTAACTGCTA ATTTTCTTTCTTGAAGGAGTTGTCAAACATGGTAACTGCTA < 41bp 0.802067354526636 0.467560110357365 0.34494203 0.29096353 prediction 0.604134709053273 Functional Loss - SERPINI1 ENSG00000163536 CDS Human protein_coding chr3:167508187 chr3:167508188 nonsynonymous SNV 0.950 0 22 hPsi_associated_SNPs_7256 0 0 0 0 1 Endoplasmic reticulum 0.438691062274969 0.4387241919309 0 0 hPsi_site_12673 iPseU_CNN:0;iRNA_PseU:0 12674 chr1 213032441 213032441 1 + T G PRAD 213032440 + 213032420 213032460 41 TGTGCTCGGTGGCCCAGGTGTTCATCCTGGGCTTGCCCTCC TGTGCTCGGTGGCCCAGGTGTGCATCCTGGGCTTGCCCTCC < 41bp 0.821721112091953 0.519660042354535 0.69736993 0.6321831 prediction 0.604122139474836 Functional Loss - FLVCR1 ENSG00000162769 CDS Human protein_coding chr1:213032440 chr1:213032441 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_7257 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995102 0.13037366 0 hPsi_site_12674 iPseU_CNN:0.13037366;iRNA_PseU:0 12675 chr1 203798695 203798695 1 + A G UCEC 203798694 + 203798674 203798714 41 TCCCCTCAGCTGCGGAGCGTTATGAAAGTAGAAAGTTCCGA TCCCCTCAGCTGCGGAGCGTTGTGAAAGTAGAAAGTTCCGA < 41bp 0.802027942266852 0.389173051816243 0.34655893 0.22848642 prediction 0.604055884533703 Functional Loss - ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203798694 chr1:203798695 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7258 0 0 1 0 1 Nucleus 0.438871152945303 0.439225768678132 0 0 hPsi_site_12675 iPseU_CNN:0;iRNA_PseU:0 12676 chr6 129823869 129823869 1 + A C UCEC 129823870 - 129823850 129823890 41 TGCAATTGCAATGTGACTGTTTCTTGAAAGCCCGAACTGCT TGCAATTGCAATGTGACTGTTGCTTGAAAGCCCGAACTGCT < 41bp 0.817844935692053 0.515820064730355 0.62539375 0.29321688 prediction 0.604049741923397 Functional Loss - LAMA2 ENSG00000196569 CDS Human protein_coding chr6:129823870 chr6:129823869 nonsynonymous SNV 0.983 1 22 hPsi_associated_SNPs_7259 0 0 0 0 0 cytosol 0.439127112716687 0.438981735208088 0.2507875 0 hPsi_site_12676 iPseU_CNN:0.2507875;iRNA_PseU:0 12677 chr16 15494646 15494646 1 + A G STAD 15494645 + 15494625 15494665 41 TTTTGGGTTTTGCAAATAGGTATGAGCATTCTCCAAGGAAA TTTTGGGTTTTGCAAATAGGTGTGAGCATTCTCCAAGGAAA < 41bp 0.802010507448996 0.400674993916688 0.768144 0.3394701 prediction 0.604021014897992 Functional Loss - MPV17L ENSG00000156968 CDS Human protein_coding chr16:15494645 chr16:15494646 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_7260 0 0 0 0 2 Nucleus 0.438718736681536 0.438718585798606 0.536288 0 hPsi_site_12677 iPseU_CNN:0.536288;iRNA_PseU:0 12678 chr8 144681449 144681449 1 + A G SKCM 144681448 + 144681428 144681468 41 TCATGCTCAAGGACATGCTCTACCTGGCTGGCCTCTCCTGG TCATGCTCAAGGACATGCTCTGCCTGGCTGGCCTCTCCTGG < 41bp 0.903696539315867 0.601688106672459 0.8616883 0.3336592 prediction 0.604016865286816 Functional Loss - TIGD5 ENSG00000179886;ENSG00000104529 exonic;splicing Human other chr8:144681448 chr8:144681449 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7261 0 0 1 0 0 Ribosome 0.438740267314055 0.438739168238008 0.7233766 0 hPsi_site_12678 iPseU_CNN:0.7233766;iRNA_PseU:0 12679 chr11 33080616 33080616 1 + T G LGG 33080615 + 33080595 33080635 41 TGAATACGAAAGGAAGAAGTTTCAAGAGATTTTGGAGAGGC TGAATACGAAAGGAAGAAGTTGCAAGAGATTTTGGAGAGGC < 41bp 0.802006874822524 0.464177948120078 0.78350997 0.3597031 prediction 0.604013749645048 Functional Loss - TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33080615 chr11:33080616 nonsynonymous SNV 0.676 2 22 hPsi_associated_SNPs_7262 0 0 0 1 1 Ribosome 0.438718592991655 0.438718631229145 0.56701994 0 hPsi_site_12679 iPseU_CNN:0.56701994;iRNA_PseU:0 12680 chr6 44243559 44243559 1 + A G rs3734710 44243558 + 44243538 44243578 41 GCACTACCACGTGGAGAAGCTATTTGGCCTGGAGGGCCCGG GCACTACCACGTGGAGAAGCTGTTTGGCCTGGAGGGCCCGG < 41bp 0.801994814639135 0.392560233852833 0.7317445 0.56546336 prediction 0.603989629278271 Functional Loss - TMEM151B ENSG00000178233 CDS Human protein_coding chr6:44243558 chr6:44243559 synonymous SNV . 0 22 hPsi_associated_SNPs_7263 0 0 0 0 0 cytosol 0.438718592995844 0.438718592997932 0.33256228 0 hPsi_site_12680 iPseU_CNN:0.33256228;iRNA_PseU:0 12681 chr17 18862963 18862963 1 + A G UCEC 18862962 + 18862942 18862982 41 CATGGGTGTTCGTGCCCATCTACATCTCCTCAGAGGTGAGT CATGGGTGTTCGTGCCCATCTGCATCTCCTCAGAGGTGAGT < 41bp 0.801980670692971 0.387085569595749 0.4201591 0.2827747 prediction 0.603961341385941 Functional Loss - SLC5A10 ENSG00000154025 CDS Human protein_coding chr17:18862962 chr17:18862963 nonsynonymous SNV 0.985 5 22 hPsi_associated_SNPs_7264 0 0 0 0 2 chromatin 0.438759353964217 0.438718663656548 0 0 hPsi_site_12681 iPseU_CNN:0;iRNA_PseU:0 12682 chr17 7158154 7158154 1 + A G rs533757191 7158153 + 7158133 7158173 41 TCCTTCATTGTTTCCCCTCATACATCTCCCTCTGCCAAGGA TCCTTCATTGTTTCCCCTCATGCATCTCCCTCTGCCAAGGA < 41bp 0.801964229966494 0.393165089641326 0.7468591 0.33289438 prediction 0.603928459932988 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7158153 chr17:7158154 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_7265 0 0 1 0 0 Cytosol 0.438721273002173 0.438731535583345 0.4937182 0 hPsi_site_12682 iPseU_CNN:0.4937182;iRNA_PseU:0 12683 chr3 58368396 58368396 1 + A C BRCA 58368395 + 58368375 58368415 41 TGAGCTGGTTAAGAAGTTTTTAGATCCAAACAACTATTCCG TGAGCTGGTTAAGAAGTTTTTCGATCCAAACAACTATTCCG < 41bp 0.801958633583226 0.438046958209606 0.5761609 0.279225 prediction 0.603917267166452 Functional Loss - PXK ENSG00000168297 CDS Human protein_coding chr3:58368395 chr3:58368396 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7266 0 0 1 0 1 Ribosome 0.438718592863288 0.438718592841935 0.1523218 0 hPsi_site_12683 iPseU_CNN:0.1523218;iRNA_PseU:0 12684 chr17 19284737 19284737 1 + A G UCEC 19284736 + 19284716 19284756 41 GATCCGCTTCCAGCCTTCTCTACAGCCTGTGGCTAGTGAGC GATCCGCTTCCAGCCTTCTCTGCAGCCTGTGGCTAGTGAGC < 41bp 0.917095685980051 0.615157239064878 0.32207936 0.30683842 prediction 0.603876893830346 Functional Loss - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19284736 chr17:19284737 synonymous SNV . 0 22 hPsi_associated_SNPs_7267 0 0 0 0 0 exosome 0.439550644584394 0.438762484827971 0 0 hPsi_site_12684 iPseU_CNN:0;iRNA_PseU:0 12685 chr11 372880 372880 1 + T G UCEC 372879 + 372859 372899 41 GGCAGGTGAACCTGCACGTGTTTGAGGACTGGTGTGGGGGC GGCAGGTGAACCTGCACGTGTGTGAGGACTGGTGTGGGGGC < 41bp 0.852829275065284 0.550897563968985 0.4621226 0.30752844 prediction 0.603863422192597 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:372879 chr11:372880 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_7268 0 0 1 0 2 chromatin 0.438719820548323 0.438714956524542 0 0 hPsi_site_12685 iPseU_CNN:0;iRNA_PseU:0 12686 chr1 53323073 53323073 1 + T G UCEC 53323072 + 53323052 53323092 41 TAATACTCTAGTCACTGATATTTCTGCACTGCTTACCTGTA TAATACTCTAGTCACTGATATGTCTGCACTGCTTACCTGTA < 41bp 0.801928395214419 0.458781989053885 0.36944377 0.26183403 prediction 0.603856790428837 Functional Loss - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53323072 chr1:53323073 nonsynonymous SNV 0.891 2 22 hPsi_associated_SNPs_7269 0 0 1 0 0 chromatin 0.438601192882443 0.438665835480551 0 0 hPsi_site_12686 iPseU_CNN:0;iRNA_PseU:0 12687 chr16 71418711 71418711 1 + T G UCEC 71418710 + 71418690 71418730 41 TGAAGCTGACCTCAGAGGAGTTTAACGCGATCTTCACATTT TGAAGCTGACCTCAGAGGAGTGTAACGCGATCTTCACATTT < 41bp 0.801925476718726 0.462767567487387 0.48888093 0.3052455 prediction 0.603850953437452 Functional Loss - CALB2 ENSG00000172137 CDS Human protein_coding chr16:71418710 chr16:71418711 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_7270 0 0 0 0 2 Ribosome 0.438726681326301 0.438715134862483 0 0 hPsi_site_12687 iPseU_CNN:0;iRNA_PseU:0 12688 chr17 4904599 4904599 1 + A G UCEC 4904598 + 4904578 4904618 41 TGCTCCACGCCTTTGAAGGCTACAACGTGTGCATCTTTGCC TGCTCCACGCCTTTGAAGGCTGCAACGTGTGCATCTTTGCC < 41bp 0.801923356132618 0.367261948962136 0.70887625 0.46063077 prediction 0.603846712265236 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4904598 chr17:4904599 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_7271 0 0 1 0 2 Ribosome 0.439073536488553 0.438681718115221 0.4177525 0 hPsi_site_12688 iPseU_CNN:0.4177525;iRNA_PseU:0 Floating-Harbor syndrome Floating-Harbor syndrome 12689 chr1 62916290 62916290 1 + A G rs141001844 62916289 + 62916269 62916309 41 AACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACA AACAAAAAAAATGTAGAAGCTGTTGGACTTCTTGGAGGACA < 41bp 0.801890672458357 0.396358927969523 0.75243837 0.63417685 prediction 0.603781344916714 Functional Loss - USP1 ENSG00000162607 CDS Human protein_coding chr1:62916289 chr1:62916290 nonsynonymous SNV 0.833 0 22 hPsi_associated_SNPs_7272 0 0 1 0 0 Ribosome 0.438718491700572 0.438718477315945 0.23652304 0 hPsi_site_12689 iPseU_CNN:0.23652304;iRNA_PseU:0 12690 chr3 36547293 36547293 1 + T G COAD 36547292 + 36547272 36547312 41 CCTATGTTGCCTTGTACAAATTTGTACCACAGGAGAATGAA CCTATGTTGCCTTGTACAAATGTGTACCACAGGAGAATGAA < 41bp 0.801880539175677 0.450306582511085 0.19592428 0.14898014 prediction 0.603761078351354 Functional Loss - STAC ENSG00000144681 CDS Human protein_coding chr3:36547292 chr3:36547293 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7273 0 0 1 0 1 exosome 0.430684662475248 0.438685003149542 0 0 hPsi_site_12690 iPseU_CNN:0;iRNA_PseU:0 12691 chr16 70349912 70349912 1 + A C UCEC 70349913 - 70349893 70349933 41 TGTGTTATCAACAAGGTTGCTTCTGATCAGCTTGTTGAGTA TGTGTTATCAACAAGGTTGCTGCTGATCAGCTTGTTGAGTA < 41bp 0.801875430353003 0.47022666216365 0.26883775 0.15400735 prediction 0.603750860706006 Functional Loss - DDX19B ENSG00000157349;ENSG00000260537 CDS Human other chr16:70349913 chr16:70349912 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7274 0 0 0 0 0 chromatin 0.438822699024264 0.438324813582577 0 0 hPsi_site_12691 iPseU_CNN:0;iRNA_PseU:0 12692 chr20 49191125 49191125 1 + A G PRAD 49191124 + 49191104 49191144 41 TGAAGACACAAATTTGAAATTAACATTGATCTCTGAAGATA TGAAGACACAAATTTGAAATTGACATTGATCTCTGAAGATA < 41bp 0.801862520699163 0.384571840870817 0.24665022 0.18329883 prediction 0.603725041398326 Functional Loss - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49191124 chr20:49191125 synonymous SNV . 0 22 hPsi_associated_SNPs_7275 0 0 1 0 2 Ribosome 0.438770602431138 0.439842166748061 0 0 hPsi_site_12692 iPseU_CNN:0;iRNA_PseU:0 12693 chr10 105173020 105173020 1 + T G UCEC 105173019 + 105172999 105173039 41 GATGATGTTCCTGTCCAGGGTTTTTTCAAAAAGGCTGGGGC GATGATGTTCCTGTCCAGGGTGTTTTCAAAAAGGCTGGGGC < 41bp 0.846955818382517 0.545098133574104 0.30880708 0.3109613 prediction 0.603715369616826 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105173019 chr10:105173020 nonsynonymous SNV 0.554 1 22 hPsi_associated_SNPs_7276 0 0 1 0 1 Nucleus 0.438722446966232 0.438715226390322 0 0 hPsi_site_12693 iPseU_CNN:0;iRNA_PseU:0 12694 chr7 19184952 19184952 1 + T C BLCA 19184953 - 19184933 19184973 41 CCGGAGAGCTGCGTGGACACTACGGTGCTGGACTTCGTCGC CCGGAGAGCTGCGTGGACACTGCGGTGCTGGACTTCGTCGC < 41bp 0.896413579742812 0.59459062154436 0.6750533 0.29923266 prediction 0.603645916396903 Functional Loss - FERD3L ENSG00000146618 CDS Human protein_coding chr7:19184953 chr7:19184952 nonsynonymous SNV 0.945 1 22 hPsi_associated_SNPs_7277 0 0 0 0 0 unknown 0.438755090720888 0.438909025927974 0.3501066 0 hPsi_site_12694 iPseU_CNN:0.3501066;iRNA_PseU:0 12695 chr19 32949355 32949355 1 + A G UCEC 32949354 + 32949334 32949374 41 ATACTCTGCTTTTTTATGCTTACATATTCGTTCTGTCCATC ATACTCTGCTTTTTTATGCTTGCATATTCGTTCTGTCCATC < 41bp 0.801816541542428 0.392255450992227 0.30161393 0.2322183 prediction 0.603633083084855 Functional Loss - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32949354 chr19:32949355 nonsynonymous SNV 0.338 4 22 hPsi_associated_SNPs_7278 0 0 1 0 2 cytosol 0.438727316502563 0.438634669657184 0 0 hPsi_site_12695 iPseU_CNN:0;iRNA_PseU:0 12696 chr1 50659546 50659546 1 + A G STAD 50659545 + 50659525 50659565 41 TGGAGCAACTTTTCTCGCAATACGGCCGTATCATCACCTCA TGGAGCAACTTTTCTCGCAATGCGGCCGTATCATCACCTCA < 41bp 0.801798689823848 0.37947695841954 0.23391649 0.12583357 prediction 0.603597379647695 Functional Loss - ELAVL4 ENSG00000162374 CDS Human protein_coding chr1:50659545 chr1:50659546 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_7279 0 0 0 0 1 exosome 0.438720307089566 0.438709138992894 0 0 hPsi_site_12696 iPseU_CNN:0;iRNA_PseU:0 12697 chr16 3350127 3350127 1 + A G STAD 3350126 + 3350106 3350146 41 CACAGTTTCTCCTCTTTGATTATCATGGACAGTTTTTGTCG CACAGTTTCTCCTCTTTGATTGTCATGGACAGTTTTTGTCG < 41bp 0.80179603981241 0.40916972239808 0.42204496 0.24631146 prediction 0.603592079624821 Functional Loss - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3350126 chr16:3350127 nonsynonymous SNV 0.485 1 22 hPsi_associated_SNPs_7280 0 0 0 0 0 exosome 0.438881838918831 0.439338626156874 0 0 hPsi_site_12697 iPseU_CNN:0;iRNA_PseU:0 12698 chr12 32490515 32490515 1 + T G KIRC 32490514 + 32490494 32490534 41 GAGAAGAAGACTCTGAACACTTTGTTACGAATGGCTATCCA GAGAAGAAGACTCTGAACACTGTGTTACGAATGGCTATCCA < 41bp 0.801790778320376 0.463215923007739 0.38864544 0.3197723 prediction 0.603581556640752 Functional Loss - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32490514 chr12:32490515 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7281 0 0 0 0 1 Nucleus 0.43921630062379 0.439401571197941 0 0 hPsi_site_12698 iPseU_CNN:0;iRNA_PseU:0 12699 chr19 14580254 14580254 1 + T C STAD 14580253 + 14580233 14580273 41 AGACACCGGAGCACGTGTGCTTCGTGATGGAGTACTCGGCC AGACACCGGAGCACGTGTGCTCCGTGATGGAGTACTCGGCC < 41bp 0.802924122302857 0.501140564360035 0.7950328 0.23283535 prediction 0.603567115885644 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580253 chr19:14580254 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_7282 0 0 1 0 1 Ribosome 0.430337284242531 0.439066571070244 0.5900656 0 hPsi_site_12699 iPseU_CNN:0.5900656;iRNA_PseU:0 12700 chr2 241402810 241402810 1 + A G COAD 241402809 + 241402789 241402829 41 GAGCTGTCATGAAGCTGGTCTACTGTGCTCACTGCCTGGGA GAGCTGTCATGAAGCTGGTCTGCTGTGCTCACTGCCTGGGA < 41bp 0.913856437937703 0.612075354209275 0.8214264 0.6821333 prediction 0.603562167456857 Functional Loss - GPC1 ENSG00000063660 CDS Human protein_coding chr2:241402809 chr2:241402810 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7283 0 0 1 0 1 Cytosol 0.438711004682037 0.438686711105376 0.2785862 0 hPsi_site_12700 iPseU_CNN:0.2785862;iRNA_PseU:0 12701 chr22 23627249 23627249 1 + A G COAD 23627248 + 23627228 23627268 41 AGCAGTATGACTGCAAATGGTACATTCCGCTCACGGATCTC AGCAGTATGACTGCAAATGGTGCATTCCGCTCACGGATCTC < 41bp 0.917716016833329 0.615938768659179 0.828306 0.5649953 prediction 0.6035544963483 Functional Loss - BCR ENSG00000186716 CDS Human protein_coding chr22:23627248 chr22:23627249 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7284 0 0 1 0 1 Ribosome 0.438721431222704 0.439271164660891 0.5266214 0 hPsi_site_12701 iPseU_CNN:0.5266214;iRNA_PseU:0 12702 chr7 150696313 150696313 1 + A G ACC 150696312 + 150696292 150696332 41 CAGCCCTGGGCCTGCGCTGGTACGCCCTCCCGGCAGTGTCC CAGCCCTGGGCCTGCGCTGGTGCGCCCTCCCGGCAGTGTCC < 41bp 0.919481118691886 0.617718160356217 0.62615246 0.29613695 prediction 0.603525916671339 Functional Loss - NOS3 ENSG00000164867 CDS Human protein_coding chr7:150696312 chr7:150696313 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_7285 0 0 0 0 1 chromatin 0.438716438633311 0.438718585962616 0.25230492 0 hPsi_site_12702 iPseU_CNN:0.25230492;iRNA_PseU:0 12703 chr2 242151560 242151560 1 + T C UCEC 242151559 + 242151539 242151579 41 ACGCCTTCACCCTCAAGGTGTTCATCTTCCAGTTCGTCAAC ACGCCTTCACCCTCAAGGTGTCCATCTTCCAGTTCGTCAAC < 41bp 0.803078075885278 0.501323522047282 0.47813967 0.34011495 prediction 0.603509107675992 Functional Loss - ANO7 ENSG00000146205 CDS Human protein_coding chr2:242151559 chr2:242151560 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7286 0 0 0 0 2 chromatin 0.438643650082316 0.438718750903385 0 0 hPsi_site_12703 iPseU_CNN:0;iRNA_PseU:0 12704 chr4 113107967 113107967 1 + A G BLCA 113107966 + 113107946 113107986 41 ACATGGGCTTCACAAGGATGTATTTTGGAGAACGAATAGTG ACATGGGCTTCACAAGGATGTGTTTTGGAGAACGAATAGTG < 41bp 0.801753453812742 0.418999965145139 0.6945744 0.28055775 prediction 0.603506907625483 Functional Loss - C4orf32 ENSG00000174749 CDS Human protein_coding chr4:113107966 chr4:113107967 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7287 0 0 1 0 0 chromatin 0.434336350703581 0.436424068097684 0.3891488 0 hPsi_site_12704 iPseU_CNN:0.3891488;iRNA_PseU:0 12705 chr3 151475230 151475230 1 + A G STAD 151475229 + 151475209 151475249 41 GATGATGGACTTATGTATGTTACAAGACTTCGAAATGTTGG GATGATGGACTTATGTATGTTGCAAGACTTCGAAATGTTGG < 41bp 0.801741789237178 0.405798789938862 0.56662476 0.28154814 prediction 0.603483578474356 Functional Loss - AADACL2 ENSG00000197953 CDS Human protein_coding chr3:151475229 chr3:151475230 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_7288 0 0 0 0 0 exosome 0.43777290974588 0.438766197138416 0.13324952 0 hPsi_site_12705 iPseU_CNN:0.13324952;iRNA_PseU:0 12706 chr10 60127685 60127685 1 + T G UCEC 60127684 + 60127664 60127704 41 TGTTCTCTTTTAAATCTAGTTTTATTGTCCATATGTTCTCT TGTTCTCTTTTAAATCTAGTTGTATTGTCCATATGTTCTCT < 41bp 0.801738326939476 0.47935928618497 0.6165279 0.5359784 prediction 0.603476653878953 Functional Loss - UBE2D1 ENSG00000072401 CDS Human protein_coding chr10:60127684 chr10:60127685 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7289 0 0 1 0 2 nucleoplasm 0.437648128425501 0.438506319192798 0.161099 0 hPsi_site_12706 iPseU_CNN:0.161099;iRNA_PseU:0 12707 chr1 82456501 82456501 1 + A G rs74098542 82456500 + 82456480 82456520 41 AGTCCGAGGGAACTGACAGCTATGTCTCCCAACTGACAGCA AGTCCGAGGGAACTGACAGCTGTGTCTCCCAACTGACAGCA < 41bp 0.889242992234475 0.587523122222111 0.23138794 0.16606742 prediction 0.603439740024727 Functional Loss - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456500 chr1:82456501 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_7290 0 0 1 1 0 cytosol 0.439073747832135 0.438948617764849 0 0 hPsi_site_12707 iPseU_CNN:0;iRNA_PseU:0 12708 chr14 52781389 52781389 1 + A G CHOL 52781388 + 52781368 52781408 41 CGGGGTGCTGGGGAACCTCATAGCACTGGCGCTGCTGGCGC CGGGGTGCTGGGGAACCTCATGGCACTGGCGCTGCTGGCGC < 41bp 0.801716202316594 0.383371807622808 0.42443568 0.28994983 prediction 0.603432404633189 Functional Loss - PTGER2 ENSG00000125384 CDS Human protein_coding chr14:52781388 chr14:52781389 nonsynonymous SNV 0.980 0 22 hPsi_associated_SNPs_7291 0 0 0 0 0 exosome 0.438679495622326 0.438934840393872 0 0 hPsi_site_12708 iPseU_CNN:0;iRNA_PseU:0 12709 chr3 183884284 183884284 1 + A G COAD 183884283 + 183884263 183884303 41 TAATGACGATGCAGTCCGGGTACTGCGGGAGATTGTGCACA TAATGACGATGCAGTCCGGGTGCTGCGGGAGATTGTGCACA < 41bp 0.801715529988226 0.36232872636753 0.8241892 0.27724707 prediction 0.603431059976453 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183884283 chr3:183884284 synonymous SNV . 0 22 hPsi_associated_SNPs_7292 0 0 1 0 3 Cytosol 0.438707630364167 0.438737482551411 0.6483784 0 hPsi_site_12709 iPseU_CNN:0.6483784;iRNA_PseU:0 12710 chr19 13049502 13049502 1 + A G LUSC 13049501 + 13049481 13049521 41 CCCTCGGCCCGCCATGCTGCTATCCGTGCCGCTGCTGCTCG CCCTCGGCCCGCCATGCTGCTGTCCGTGCCGCTGCTGCTCG < 41bp 0.80170536864915 0.399599978610069 0.76527524 0.35528862 prediction 0.603410737298301 Functional Loss - CALR ENSG00000179218 CDS Human protein_coding chr19:13049501 chr19:13049502 synonymous SNV . 0 22 hPsi_associated_SNPs_7293 0 0 1 0 1 Ribosome 0.438820181339237 0.438756651330577 0.53055048 0 hPsi_site_12710 iPseU_CNN:0.53055048;iRNA_PseU:0 12711 chr2 113082151 113082151 1 + A G rs75832760 113082150 + 113082130 113082170 41 AAATGCAGCTCAACACCAATTATGAGTCCCTGCAAAACCCA AAATGCAGCTCAACACCAATTGTGAGTCCCTGCAAAACCCA < 41bp 0.801703959489068 0.392315099857697 0.32505164 0.33451825 prediction 0.603407918978137 Functional Loss - ZC3H6 ENSG00000188177 CDS Human protein_coding chr2:113082150 chr2:113082151 nonsynonymous SNV 0.033 1 22 hPsi_associated_SNPs_7294 0 0 0 0 1 Cytosol 0.430676297787212 0.436612991656045 0 0 hPsi_site_12711 iPseU_CNN:0;iRNA_PseU:0 12712 chr19 48977227 48977227 1 + T C UCEC 48977226 + 48977206 48977246 41 TTGACCGGATGATGGAGGCCTTCGCCCAGCGATACTGCCTG TTGACCGGATGATGGAGGCCTCCGCCCAGCGATACTGCCTG < 41bp 0.801694836917025 0.493833200767094 0.24812084 0.14846748 prediction 0.60338967383405 Functional Loss - CYTH2 ENSG00000105443 CDS Human protein_coding chr19:48977226 chr19:48977227 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_7295 0 0 1 0 2 Ribosome 0.438880476580656 0.438851453392008 0 0 hPsi_site_12712 iPseU_CNN:0;iRNA_PseU:0 12713 chr17 73205948 73205948 1 + T G GBM 73205947 + 73205927 73205967 41 AGATGGTGCCAAGTTGCCCCTTTATCTATATCATCCGTAAG AGATGGTGCCAAGTTGCCCCTGTATCTATATCATCCGTAAG < 41bp 0.801693898358704 0.460631948894009 0.29393667 0.19203204 prediction 0.603387796717409 Functional Loss - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73205947 chr17:73205948 nonsynonymous SNV 0.709 0 22 hPsi_associated_SNPs_7296 0 0 1 0 1 Nucleus 0.436661817408207 0.43862159360629 0 0 hPsi_site_12713 iPseU_CNN:0;iRNA_PseU:0 12714 chr16 20432639 20432639 1 + A G UCEC 20432638 + 20432618 20432658 41 GTCGAGACCCGCTGGCCATCTACTTTACCAGCGGAACCACC GTCGAGACCCGCTGGCCATCTGCTTTACCAGCGGAACCACC < 41bp 0.80168501498444 0.355494393916226 0.6554899 0.33872452 prediction 0.60337002996888 Functional Loss - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20432638 chr16:20432639 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_7297 0 0 0 0 2 cytosol 0.438718648941383 0.438718665193026 0.3109798 0 hPsi_site_12714 iPseU_CNN:0.3109798;iRNA_PseU:0 12715 chr6 44121903 44121903 1 + A G UCEC 44121902 + 44121882 44121922 41 TCTGCTTTGGACACTTCAAATACCTCAGTGCCCACAACTAC TCTGCTTTGGACACTTCAAATGCCTCAGTGCCCACAACTAC < 41bp 0.801677168306299 0.379809547802915 0.73210984 0.3683734 prediction 0.603354336612599 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44121902 chr6:44121903 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7298 0 0 1 0 1 Ribosome 0.440276523227753 0.439189164853782 0.46421968 0 hPsi_site_12715 iPseU_CNN:0.46421968;iRNA_PseU:0 12716 chr1 205240361 205240361 1 + A G STAD 205240360 + 205240340 205240380 41 AGAAGGTGGCCTACCAGTCCTATGAGAGGGCACGGGACATC AGAAGGTGGCCTACCAGTCCTGTGAGAGGGCACGGGACATC < 41bp 0.801671883742239 0.365182469916585 0.32610613 0.2546373 prediction 0.603343767484479 Functional Loss - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205240360 chr1:205240361 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_7299 0 0 0 0 1 chromatin 0.438713570147854 0.438691129700985 0 0 hPsi_site_12716 iPseU_CNN:0;iRNA_PseU:0 12717 chr5 175717418 175717418 1 + A G LUAD 175717417 + 175717397 175717437 41 AGGGCTGCCTCAAAGCATATTACATCCACAAGATGTGGCAT AGGGCTGCCTCAAAGCATATTGCATCCACAAGATGTGGCAT < 41bp 0.801663807687984 0.379064446137622 0.31676888 0.2549786 prediction 0.603327615375967 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717417 chr5:175717418 synonymous SNV . 0 22 hPsi_associated_SNPs_7300 0 0 0 0 0 chromatin 0.439438643577209 0.438714634335193 0 0 hPsi_site_12717 iPseU_CNN:0;iRNA_PseU:0 12718 chr2 69043470 69043470 1 + A G rs200600772 69043469 + 69043449 69043489 41 CCATCCTTCCTCGTGACAACTATAGTCTCCTGAGCTACATC CCATCCTTCCTCGTGACAACTGTAGTCTCCTGAGCTACATC < 41bp 0.801652816955782 0.366523799076382 0.56249034 0.59717274 prediction 0.603305633911563 Functional Loss - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69043469 chr2:69043470 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_7301 0 0 1 0 2 chromatin 0.442145945945509 0.441171070156976 0 0 hPsi_site_12718 iPseU_CNN:0;iRNA_PseU:0 12719 chr15 98513117 98513117 1 + A G HNSC 98513116 + 98513096 98513136 41 TTTTTTTGGCTTATTAGGTATACATTCACATTCCTGGTGCT TTTTTTTGGCTTATTAGGTATGCATTCACATTCCTGGTGCT < 41bp 0.801609862497194 0.393305525794441 0.64034 0.25587857 prediction 0.603219724994387 Functional Loss - ARRDC4 ENSG00000140450 CDS Human protein_coding chr15:98513116 chr15:98513117 nonsynonymous SNV 0.469 2 22 hPsi_associated_SNPs_7302 0 0 1 0 1 nucleoplasm 0.43871853502047 0.438718592041737 0.28068 0 hPsi_site_12719 iPseU_CNN:0.28068;iRNA_PseU:0 12720 chr18 11883645 11883645 1 + T C rs143513168 11883646 - 11883626 11883666 41 ATATTGTTTTCGTAGATTTTTATACTTGATCAATTAATGGA ATATTGTTTTCGTAGATTTTTGTACTTGATCAATTAATGGA < 41bp 0.801598083162468 0.424955139578609 0.30566305 0.29648563 prediction 0.603196166324935 Functional Loss - GNAL;MPPE1 ENSG00000141404;ENSG00000154889 UTR3 Human other chr18:11883646 chr18:11883645 . . 0 22 hPsi_associated_SNPs_7303 0 0 1 3 0 unknown 0.438327203322166 0.438308862428074 0 0 hPsi_site_12720 iPseU_CNN:0;iRNA_PseU:0 12721 chr2 31491244 31491244 1 + A G rs142176692 31491243 + 31491223 31491263 41 TAGTCTTCATGTTAATACAGTACATTTATTCTTTGGTACCT TAGTCTTCATGTTAATACAGTGCATTTATTCTTTGGTACCT < 41bp 0.824350695594553 0.52279981071222 0.42668656 0.3146773 prediction 0.603101769764666 Functional Loss - EHD3 ENSG00000013016 UTR3 Human protein_coding chr2:31491243 chr2:31491244 . . 0 22 hPsi_associated_SNPs_7304 0 0 0 1 0 exosome 0.439432071096796 0.448938532203279 0 0 hPsi_site_12721 iPseU_CNN:0;iRNA_PseU:0 12722 chr1 156764559 156764559 1 + A C COAD 156764558 + 156764538 156764578 41 GGGGCCCAGCAATGGATGACTAAGTCATTGACAGAAGAGAA GGGGCCCAGCAATGGATGACTCAGTCATTGACAGAAGAGAA < 41bp 0.80154229417888 0.431007094118243 0.23389256 0.14463347 prediction 0.603084588357761 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156764558 chr1:156764559 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_7305 0 0 1 0 1 Ribosome 0.438718810278448 0.438718665273549 0 0 hPsi_site_12722 iPseU_CNN:0;iRNA_PseU:0 12723 chr12 46205255 46205255 1 + A C rs73292513 46205254 + 46205234 46205274 41 TGGGGAGGATGATGATGAGGTACCACCAGGCAATCCAAAGC TGGGGAGGATGATGATGAGGTCCCACCAGGCAATCCAAAGC < 41bp 0.801534104994954 0.438156121293593 0.7351278 0.1967074 prediction 0.603068209989908 Functional Loss - ARID2 ENSG00000189079 CDS Human protein_coding chr12:46205254 chr12:46205255 synonymous SNV . 0 22 hPsi_associated_SNPs_7306 0 0 1 0 2 Nucleus 0.438787826181859 0.438718689793198 0.4702556 0 hPsi_site_12723 iPseU_CNN:0.4702556;iRNA_PseU:0 12724 chr19 4501929 4501929 1 + A G UCEC 4501928 + 4501908 4501948 41 TGCTGTTCCCACCAGCAGCGTACGGGAGGGTCCCGACCTGG TGCTGTTCCCACCAGCAGCGTGCGGGAGGGTCCCGACCTGG < 41bp 0.801504126416301 0.398830857096758 0.5712407 0.21507779 prediction 0.603008252832602 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4501928 chr19:4501929 synonymous SNV . 0 22 hPsi_associated_SNPs_7307 0 0 1 0 2 unknown 0.439507236168323 0.438738685764864 0.1424814 0 hPsi_site_12724 iPseU_CNN:0.1424814;iRNA_PseU:0 12725 chr19 57133632 57133632 1 + A G UCEC 57133631 + 57133611 57133651 41 ACCACACCGGCGAGAAGCCCTACGTGTGCGGCGAGTGCGGC ACCACACCGGCGAGAAGCCCTGCGTGTGCGGCGAGTGCGGC < 41bp 0.801499494678487 0.372543680384729 0.90128493 0.32478258 prediction 0.602998989356975 Functional Loss - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133631 chr19:57133632 nonsynonymous SNV 0.204 1 22 hPsi_associated_SNPs_7308 0 0 0 0 0 exosome 0.438718430396413 0.438718590228449 0.80256986 0 hPsi_site_12725 iPseU_CNN:0.80256986;iRNA_PseU:0 12726 chr9 113449478 113449478 1 + T G GBM 113449477 + 113449457 113449497 41 GGAAGACAGTGATGATGGCATTTACTGCTGCACGGCCAACA GGAAGACAGTGATGATGGCATGTACTGCTGCACGGCCAACA < 41bp 0.852717400066297 0.551222757312682 0.33545452 0.26578653 prediction 0.602989285507231 Functional Loss - MUSK ENSG00000030304 CDS Human protein_coding chr9:113449477 chr9:113449478 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_7309 0 0 0 0 2 exosome 0.438718594560031 0.438710516463414 0 0 hPsi_site_12726 iPseU_CNN:0;iRNA_PseU:0 12727 chr4 27024472 27024472 1 + T G LIHC 27024471 + 27024451 27024491 41 AAACCTCGCCACACATCATGTTCCTCAGCTGGCAACGACAG AAACCTCGCCACACATCATGTGCCTCAGCTGGCAACGACAG < 41bp 0.836298271370823 0.534809451401686 0.26059806 0.21724683 prediction 0.602977639938274 Functional Loss - STIM2 ENSG00000109689 CDS Human protein_coding chr4:27024471 chr4:27024472 nonsynonymous SNV 0.936 2 22 hPsi_associated_SNPs_7310 0 0 1 0 0 Nucleus 0.402203818411058 0.43829430915635 0 0 hPsi_site_12727 iPseU_CNN:0;iRNA_PseU:0 12728 chr16 30673995 30673995 1 + A G UCEC 30673994 + 30673974 30674014 41 CCCGGGGCCCGACCCGCTGCTAGTGCCTTTCCCCCCAAAGG CCCGGGGCCCGACCCGCTGCTGGTGCCTTTCCCCCCAAAGG < 41bp 0.801481502947964 0.453801808353661 0.42229372 0.27077597 prediction 0.602963005895928 Functional Loss - FBRS ENSG00000156860 CDS Human protein_coding chr16:30673994 chr16:30673995 synonymous SNV . 0 22 hPsi_associated_SNPs_7311 0 0 1 0 0 chromatin 0.438718598462674 0.438718592995096 0 0 hPsi_site_12728 iPseU_CNN:0;iRNA_PseU:0 12729 chr2 172822372 172822372 1 + T G UCEC 172822371 + 172822351 172822391 41 TTCAGACCTTTTTGATGTGGTTTATTGAAACTGCTAGCTTT TTCAGACCTTTTTGATGTGGTGTATTGAAACTGCTAGCTTT < 41bp 0.801480963512739 0.468559528546241 0.24412677 0.17327571 prediction 0.602961927025477 Functional Loss - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172822371 chr2:172822372 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7312 0 0 1 0 1 Ribosome 0.439542997529398 0.436935527055554 0 0 hPsi_site_12729 iPseU_CNN:0;iRNA_PseU:0 12730 chr7 128486906 128486906 1 + T G OV 128486905 + 128486885 128486925 41 GCACCGTGGAGTACATCCCCTTCACTCCTGGAGACTATGAC GCACCGTGGAGTACATCCCCTGCACTCCTGGAGACTATGAC < 41bp 0.858851907877015 0.557384867737209 0.28604537 0.30878335 prediction 0.602934080279611 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128486905 chr7:128486906 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_7313 0 0 0 0 1 chromatin 0.438714909611652 0.438657794157261 0 0 hPsi_site_12730 iPseU_CNN:0;iRNA_PseU:0 12731 chr1 27101241 27101241 1 + A G KIRP 27101240 + 27101220 27101260 41 GTAATGACATGACCTATAATTATGCCAACAGGCAGAGCACG GTAATGACATGACCTATAATTGTGCCAACAGGCAGAGCACG < 41bp 0.801445800340908 0.373668035354307 0.39318877 0.32899207 prediction 0.602891600681816 Functional Loss - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27101240 chr1:27101241 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7314 0 0 1 0 0 Nucleus 0.438824931016747 0.438918409475076 0 0 hPsi_site_12731 iPseU_CNN:0;iRNA_PseU:0 12732 chr15 40993273 40993273 1 + A G LIHC 40993272 + 40993252 40993292 41 TCATTTGCAGCAGTGTGGCATAAATGCCAACGATGTGAAGA TCATTTGCAGCAGTGTGGCATGAATGCCAACGATGTGAAGA < 41bp 0.801439502824246 0.37728465449781 0.29262054 0.22603124 prediction 0.602879005648493 Functional Loss - RAD51 ENSG00000051180 CDS Human protein_coding chr15:40993272 chr15:40993273 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7315 0 0 1 0 0 Cytosol 0.438724970211759 0.439911251529068 0 0 hPsi_site_12732 iPseU_CNN:0;iRNA_PseU:0 12733 chr4 128626791 128626791 1 + A G LAML 128626790 + 128626770 128626810 41 CCCAAGGATGATCTTATTGATATTGCCGTATACTGTCGCCA CCCAAGGATGATCTTATTGATGTTGCCGTATACTGTCGCCA < 41bp 0.910952461355867 0.60951539902638 0.7206759 0.46625614 prediction 0.602874124658975 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128626790 chr4:128626791 nonsynonymous SNV 0.923 1 22 hPsi_associated_SNPs_7316 0 0 1 1 0 nucleolus 0.43867394011773 0.43867997842365 0.4413518 0 hPsi_site_12733 iPseU_CNN:0.4413518;iRNA_PseU:0 12734 chr1 47610110 47610110 1 + T G UCEC 47610109 + 47610089 47610129 41 AGAGGAAGAGGCACTTGGATTTTCTGGACATCCTCCTCTTG AGAGGAAGAGGCACTTGGATTGTCTGGACATCCTCCTCTTG < 41bp 0.844464291757986 0.543031070813055 0.76294607 0.56431055 prediction 0.602866441889862 Functional Loss - CYP4A22 ENSG00000162365 CDS Human protein_coding chr1:47610109 chr1:47610110 nonsynonymous SNV 0.178 4 22 hPsi_associated_SNPs_7317 0 0 0 0 2 exosome 0.438718632756908 0.438718594123067 0.39727104 0 hPsi_site_12734 iPseU_CNN:0.39727104;iRNA_PseU:0 12735 chr17 7489331 7489331 1 + A G UCEC 7489330 + 7489310 7489350 41 AGGGTTGAGTCTCCAGTCTGTAATGCTGGAGCTAGTGGCAT AGGGTTGAGTCTCCAGTCTGTGATGCTGGAGCTAGTGGCAT < 41bp 0.801411880369729 0.360496662536505 0.92107975 0.19516033 prediction 0.602823760739459 Functional Loss - MPDU1 ENSG00000129255 CDS Human protein_coding chr17:7489330 chr17:7489331 synonymous SNV . 0 22 hPsi_associated_SNPs_7318 0 0 1 0 3 Ribosome 0.438718398236325 0.438718631844832 0.8421595 0 hPsi_site_12735 iPseU_CNN:0.8421595;iRNA_PseU:0 12736 chr17 80430453 80430453 1 + A G rs201499735 80430452 + 80430432 80430472 41 TCCTGCAGGGGTGCACTATGTATTTGATACGACGATAGCTG TCCTGCAGGGGTGCACTATGTGTTTGATACGACGATAGCTG < 41bp 0.801408688860228 0.392920237730338 0.7836002 0.25098622 prediction 0.602817377720457 Functional Loss - NARF ENSG00000141562 CDS Human protein_coding chr17:80430452 chr17:80430453 synonymous SNV . 0 22 hPsi_associated_SNPs_7319 0 0 1 0 1 Cytosol 0.43815046431401 0.438369394648271 0.5672004 0 hPsi_site_12736 iPseU_CNN:0.5672004;iRNA_PseU:0 12737 chr5 459533 459533 1 + A G rs141734504 459532 + 459512 459552 41 TGAAGATTTGAAAACAAAGGTACTAGTTTTATGTCTTCAGC TGAAGATTTGAAAACAAAGGTGCTAGTTTTATGTCTTCAGC < 41bp 0.801379345746277 0.396497372140372 0.32340053 0.25930154 prediction 0.602758691492553 Functional Loss - EXOC3 ENSG00000180104 CDS Human protein_coding chr5:459532 chr5:459533 synonymous SNV . 0 22 hPsi_associated_SNPs_7320 0 0 1 0 2 Ribosome 0.436148872107702 0.439043131142052 0 0 hPsi_site_12737 iPseU_CNN:0;iRNA_PseU:0 12738 chr2 216964934 216964934 1 + A G LUAD 216964933 + 216964913 216964953 41 ACTACGGCACTATCACCTGGTACAACATCTTCCTCGTGTAT ACTACGGCACTATCACCTGGTGCAACATCTTCCTCGTGTAT < 41bp 0.912180218734831 0.610812982127199 0.740687 0.47248277 prediction 0.602734473215265 Functional Loss - TMEM169 ENSG00000163449 CDS Human protein_coding chr2:216964933 chr2:216964934 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7321 0 0 0 0 0 Nucleus 0.438713570108301 0.43871706361565 0.481374 0 hPsi_site_12738 iPseU_CNN:0.481374;iRNA_PseU:0 12739 chr1 158450055 158450055 1 + A G UCEC 158450054 + 158450034 158450074 41 TTCTTCCTTGGTTTTGCCATTACCAACTGCCTGCTATTGGG TTCTTCCTTGGTTTTGCCATTGCCAACTGCCTGCTATTGGG < 41bp 0.897302094597619 0.595949378978518 0.3224879 0.24252936 prediction 0.602705431238201 Functional Loss - OR10R2 ENSG00000198965 CDS Human protein_coding chr1:158450054 chr1:158450055 nonsynonymous SNV 0.770 1 22 hPsi_associated_SNPs_7322 0 0 0 0 0 unknown 0.438720567831822 0.438723284560353 0 0 hPsi_site_12739 iPseU_CNN:0;iRNA_PseU:0 12740 chr8 146068327 146068327 1 + A G LUAD 146068326 + 146068306 146068346 41 GGGCCCAGTGGTTTTACGAATATGGGAATGCCCTGGAAGGG GGGCCCAGTGGTTTTACGAATGTGGGAATGCCCTGGAAGGG < 41bp 0.801348650508692 0.393539803836538 0.5791113 0.5433136 prediction 0.602697301017383 Functional Loss - ZNF7 ENSG00000147789 CDS Human protein_coding chr8:146068326 chr8:146068327 nonsynonymous SNV 0.557 0 22 hPsi_associated_SNPs_7323 0 0 1 0 0 chromatin 0.438736350630712 0.438824765484083 0.0715954000000001 0 hPsi_site_12740 iPseU_CNN:0.0715954000000001;iRNA_PseU:0 12741 chr2 242407612 242407612 1 + A G UCEC 242407611 + 242407591 242407631 41 CTAACAGAACTGGAAAAGGCTACCAAACGCTGTAAGAAGTT CTAACAGAACTGGAAAAGGCTGCCAAACGCTGTAAGAAGTT < 41bp 0.801337599896618 0.366884709446895 0.5224097 0.24613678 prediction 0.602675199793236 Functional Loss - FARP2 ENSG00000006607 CDS Human protein_coding chr2:242407611 chr2:242407612 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_7324 0 0 0 0 1 Nucleus 0.438472242576475 0.43199017103034 0.0448194 0 hPsi_site_12741 iPseU_CNN:0.0448194;iRNA_PseU:0 12742 chr16 31476104 31476104 1 + A G UCEC 31476103 + 31476083 31476123 41 TCGAGGCCTTCGTGCGCAGCTATGGCGCGGCGCTGCTGCGG TCGAGGCCTTCGTGCGCAGCTGTGGCGCGGCGCTGCTGCGG < 41bp 0.911243104899046 0.609917413936947 0.33794942 0.2972899 prediction 0.602651381924197 Functional Loss - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31476103 chr16:31476104 nonsynonymous SNV 0.742 3 22 hPsi_associated_SNPs_7325 0 0 1 0 0 cytosol 0.438718564360107 0.438729013112921 0 0 hPsi_site_12742 iPseU_CNN:0;iRNA_PseU:0 12743 chr4 17623235 17623235 1 + T G COAD 17623234 + 17623214 17623254 41 TGATCAGTGTATCCAGAAGTTTCTGGATATTGCAAGACAGA TGATCAGTGTATCCAGAAGTTGCTGGATATTGCAAGACAGA < 41bp 0.846870641400626 0.54554496709659 0.34545046 0.21226376 prediction 0.602651348608071 Functional Loss - MED28 ENSG00000118579 CDS Human protein_coding chr4:17623234 chr4:17623235 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7326 0 0 1 2 2 Ribosome 0.441092093072378 0.438384935547042 0 0 hPsi_site_12743 iPseU_CNN:0;iRNA_PseU:0 12744 chr3 122607399 122607399 1 + A C rs142240975 122607398 + 122607378 122607418 41 AATGCCCCGAGTTCCGAATTTACTTCCCTCCCCACCAGAAA AATGCCCCGAGTTCCGAATTTCCTTCCCTCCCCACCAGAAA < 41bp 0.80131929876301 0.470631780210996 0.8699572 0.68622154 prediction 0.60263859752602 Functional Loss - LINC02035 ENSG00000273033 ncRNA_exonic Human lincRNA chr3:122607398 chr3:122607399 . . 0 22 hPsi_associated_SNPs_7327 0 0 0 0 0 unknown 0.438718592995086 0.438718592995855 0.36747132 0 hPsi_site_12744 iPseU_CNN:0.36747132;iRNA_PseU:0 12745 chr13 50589840 50589840 1 + T G UCEC 50589839 + 50589819 50589859 41 TTTTTGAGAACTCACCAGCTTTTATTACCCACTGAATTTTC TTTTTGAGAACTCACCAGCTTGTATTACCCACTGAATTTTC < 41bp 0.808677758637094 0.507359606133092 0.49918127 0.32442623 prediction 0.602636305008005 Functional Loss - KCNRG ENSG00000198553 CDS Human protein_coding chr13:50589839 chr13:50589840 nonsynonymous SNV 0.968 0 22 hPsi_associated_SNPs_7328 0 0 0 4 0 nucleus 0.438718597079847 0.438718592966731 0 0 hPsi_site_12745 iPseU_CNN:0;iRNA_PseU:0 12746 chr11 94862740 94862740 1 + A G UCEC 94862739 + 94862719 94862759 41 TTTTGACAATTCTGGGGAGTTATAAACTCAAAAAACTAATA TTTTGACAATTCTGGGGAGTTGTAAACTCAAAAAACTAATA < 41bp 0.801287911428747 0.397338755770982 0.47592136 0.35799018 prediction 0.602575822857494 Functional Loss - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94862739 chr11:94862740 synonymous SNV . 0 22 hPsi_associated_SNPs_7329 0 0 1 0 0 Ribosome 0.438711690285921 0.438702801184745 0 0 hPsi_site_12746 iPseU_CNN:0;iRNA_PseU:0 12747 chr12 133281245 133281245 1 + A G KIRC 133281244 + 133281224 133281264 41 ACCTGGCAGCTCTGTTCTGGTATGCCTACCTGGCCTCCTTG ACCTGGCAGCTCTGTTCTGGTGTGCCTACCTGGCCTCCTTG < 41bp 0.915298108028892 0.61403142528714 0.6205396 0.31426406 prediction 0.602533365483505 Functional Loss - PXMP2 ENSG00000176894;ENSG00000256632 CDS Human other chr12:133281244 chr12:133281245 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_7330 0 0 1 0 1 Ribosome 0.438718591280246 0.438718565081655 0.2410792 0 hPsi_site_12747 iPseU_CNN:0.2410792;iRNA_PseU:0 12748 chr3 140397202 140397202 1 + A G BLCA 140397201 + 140397181 140397221 41 GCACCTGCTTCCCCTGCCCTTACAAAGATGAGCGGAACTGC GCACCTGCTTCCCCTGCCCTTGCAAAGATGAGCGGAACTGC < 41bp 0.801266481552435 0.372130504115061 0.5900195 0.31964728 prediction 0.60253296310487 Functional Loss - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140397201 chr3:140397202 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_7331 0 0 0 0 0 exosome 0.438718594612621 0.438718592997564 0.180039 0 hPsi_site_12748 iPseU_CNN:0.180039;iRNA_PseU:0 12749 chr1 97243261 97243261 1 + A C STAD 97243260 + 97243240 97243280 41 AGTCCAGTACTTAGAATAATTATTGACAACATGTACTACCC AGTCCAGTACTTAGAATAATTCTTGACAACATGTACTACCC < 41bp 0.801257459184707 0.465829837325236 0.4122489 0.24886367 prediction 0.602514918369413 Functional Loss - PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97243260 chr1:97243261 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7332 0 0 1 0 1 Cytosol 0.438790195489007 0.42711703440386 0 0 hPsi_site_12749 iPseU_CNN:0;iRNA_PseU:0 12750 chr3 184298388 184298388 1 + A G UCEC 184298387 + 184298367 184298407 41 GAGGATGACCCCTCCGATCCTACCTACACCAGTTCCCTGGT GAGGATGACCCCTCCGATCCTGCCTACACCAGTTCCCTGGT < 41bp 0.801227982148364 0.372377642771569 0.66592866 0.27407417 prediction 0.602455964296727 Functional Loss - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184298387 chr3:184298388 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_7333 0 0 0 0 1 Endoplasmic reticulum 0.438599346157752 0.43871857229759 0.33185732 0 hPsi_site_12750 iPseU_CNN:0.33185732;iRNA_PseU:0 12751 chr3 183396909 183396909 1 + A G ESCA 183396908 + 183396888 183396928 41 GTCTGTGTGTAATGGTAAAATATATATCCTGGGCGGAAGAC GTCTGTGTGTAATGGTAAAATGTATATCCTGGGCGGAAGAC < 41bp 0.801225769047226 0.403735395948455 0.251463 0.16513616 prediction 0.602451538094452 Functional Loss - KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183396908 chr3:183396909 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_7334 0 0 1 0 1 Ribosome 0.43817039485159 0.438460614339314 0 0 hPsi_site_12751 iPseU_CNN:0;iRNA_PseU:0 12752 chr5 176863471 176863471 1 + T G KIRC 176863470 + 176863450 176863490 41 GGTGAAGGAGCACCCCCTCTTTAAGAAGCTGAACTTCAAGC GGTGAAGGAGCACCCCCTCTTGAAGAAGCTGAACTTCAAGC < 41bp 0.863036798503504 0.561825598505186 0.67805797 0.3543165 prediction 0.602422399996637 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863470 chr5:176863471 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_7335 0 0 1 0 2 Cytosol 0.438718715792515 0.438718593000825 0.35611594 0 hPsi_site_12752 iPseU_CNN:0.35611594;iRNA_PseU:0 12753 chr13 37269420 37269420 1 + A C STAD 37269419 + 37269399 37269439 41 GCCCTCCAGAGGCTCAAAAATATCATCTCCTCCAGTTCCTC GCCCTCCAGAGGCTCAAAAATCTCATCTCCTCCAGTTCCTC < 41bp 0.867666203216042 0.566458186229122 0.27087596 0.2527247 prediction 0.60241603397384 Functional Loss - SERTM1 ENSG00000180440 CDS Human protein_coding chr13:37269419 chr13:37269420 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_7336 0 0 1 0 0 exosome 0.438717325212622 0.438718592979816 0 0 hPsi_site_12753 iPseU_CNN:0;iRNA_PseU:0 12754 chr4 169099117 169099117 1 + A G STAD 169099116 + 169099096 169099136 41 TGATCCTGTGCAACAAGAGCTACCAGCAGCTGCGGCTGGGT TGATCCTGTGCAACAAGAGCTGCCAGCAGCTGCGGCTGGGT < 41bp 0.801187076995571 0.388986740438306 0.28066254 0.1966973 prediction 0.602374153991142 Functional Loss - ANXA10 ENSG00000109511 CDS Human protein_coding chr4:169099116 chr4:169099117 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_7337 0 0 0 0 2 exosome 0.438660782784372 0.439392010463323 0 0 hPsi_site_12754 iPseU_CNN:0;iRNA_PseU:0 12755 chr1 117605064 117605064 1 + T G READ 117605063 + 117605043 117605083 41 TTTGTGGTAGAGCTTCAGGGTTTGCTTCTGCCACAGGACAA TTTGTGGTAGAGCTTCAGGGTGTGCTTCTGCCACAGGACAA < 41bp 0.845705352733293 0.544519059010059 0.62645125 0.39238372 prediction 0.602372587446468 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117605063 chr1:117605064 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_7338 0 0 1 0 2 Nucleus 0.438735625296381 0.43860133635024 0.2529025 0 hPsi_site_12755 iPseU_CNN:0.2529025;iRNA_PseU:0 12756 chr18 9860726 9860726 1 + A G rs141634330 9860725 + 9860705 9860745 41 TGCTAGCCAGGGCCAGCTGGTACCTTCTTTGCCATGAGCAT TGCTAGCCAGGGCCAGCTGGTGCCTTCTTTGCCATGAGCAT < 41bp 0.801177419373376 0.41315593631518 0.79980904 0.2889744 prediction 0.602354838746752 Functional Loss - RAB31 ENSG00000168461 UTR3 Human protein_coding chr18:9860725 chr18:9860726 . . 0 22 hPsi_associated_SNPs_7339 0 0 1 0 0 Cytosol 0.438718492232492 0.438718592695726 0.59961808 0 hPsi_site_12756 iPseU_CNN:0.59961808;iRNA_PseU:0 12757 chr6 74189779 74189779 1 + A G rs201656868 74189778 + 74189758 74189798 41 ACAGGGGTTATCTATGACGCTACCAGCTGAGTTACAAGAGA ACAGGGGTTATCTATGACGCTGCCAGCTGAGTTACAAGAGA < 41bp 0.915115919206867 0.613944474548833 0.468531 0.24539188 prediction 0.602342889316067 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74189778 chr6:74189779 synonymous SNV . 0 22 hPsi_associated_SNPs_7340 0 0 1 0 1 Nucleus 0.443276675560922 0.436410388089225 0 0 hPsi_site_12757 iPseU_CNN:0;iRNA_PseU:0 12758 chrX 49021050 49021050 1 + A G rs7891878 49021049 + 49021029 49021069 41 TGCTTTTATCTCCCAGCTGTTAGCGTGCTGGACTCTGCGGA TGCTTTTATCTCCCAGCTGTTGGCGTGCTGGACTCTGCGGA < 41bp 0.801143631501503 0.386573666635762 0.43251497 0.29071528 prediction 0.602287263003005 Functional Loss - MAGIX ENSG00000017621 CDS Human other chrX:49021049 chrX:49021050 nonsynonymous SNV 0.026 1 22 hPsi_associated_SNPs_7341 0 0 0 0 2 nucleus 0.438718581644195 0.438718762208063 0 0 hPsi_site_12758 iPseU_CNN:0;iRNA_PseU:0 12759 chr22 26886097 26886097 1 + A G STAD 26886096 + 26886076 26886116 41 TACAACAATCTTTTATGGAGTAACTGGTCAGTAGATGCCCT TACAACAATCTTTTATGGAGTGACTGGTCAGTAGATGCCCT < 41bp 0.801134769147814 0.376372054003602 0.4644083 0.26403415 prediction 0.602269538295628 Functional Loss - SRRD ENSG00000100104 CDS Human protein_coding chr22:26886096 chr22:26886097 nonsynonymous SNV 0.910 4 22 hPsi_associated_SNPs_7342 0 0 1 0 2 Ribosome 0.438718592995821 0.438718593062904 0 0 hPsi_site_12759 iPseU_CNN:0;iRNA_PseU:0 12760 chr7 23340583 23340583 1 + A G STAD 23340582 + 23340562 23340602 41 ACAGATTACTTTGTGATTGTTAGTGGAACTTCTACCCGACA ACAGATTACTTTGTGATTGTTGGTGGAACTTCTACCCGACA < 41bp 0.912733580153428 0.611612450390714 0.59692454 0.29033005 prediction 0.602242259525429 Functional Loss - MALSU1 ENSG00000156928 CDS Human protein_coding chr7:23340582 chr7:23340583 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_7343 0 0 1 0 1 Ribosome 0.438713069777949 0.438686303259972 0.19384908 0 hPsi_site_12760 iPseU_CNN:0.19384908;iRNA_PseU:0 12761 chr12 95228191 95228191 1 + A G UCEC 95228190 + 95228170 95228210 41 CCCACAACTACAGCCACTACTACAGGACCATCGAGGACCTG CCCACAACTACAGCCACTACTGCAGGACCATCGAGGACCTG < 41bp 0.89893952050811 0.597831053520028 0.34129232 0.261314 prediction 0.602216933976165 Functional Loss - MIR492 ENSG00000208038;ENSG00000216306 ncRNA_exonic Human other chr12:95228190 chr12:95228191 . . 0 22 hPsi_associated_SNPs_7344 0 0 0 0 0 unknown 0.43870960751353 0.438637830648781 0 0 hPsi_site_12761 iPseU_CNN:0;iRNA_PseU:0 12762 chr17 35343953 35343953 1 + A C UCEC 35343952 + 35343932 35343972 41 AGCATTGTTGAGGTCATTGGTAGGTCTTCAGGAAGAGTTGC AGCATTGTTGAGGTCATTGGTCGGTCTTCAGGAAGAGTTGC < 41bp 0.801106070490604 0.422459574739669 0.36118016 0.24118972 prediction 0.602212140981208 Functional Loss - AATF ENSG00000108270 CDS Human other chr17:35343952 chr17:35343953 synonymous SNV . 0 22 hPsi_associated_SNPs_7345 0 0 1 0 2 chromatin 0.438712585399252 0.438719972708331 0 0 hPsi_site_12762 iPseU_CNN:0;iRNA_PseU:0 12763 chr6 74125875 74125875 1 + A G rs311686 74125874 + 74125854 74125894 41 GTATCAATGGCTGAGAGGTTTAAGGCACATCAACAGAAAAG GTATCAATGGCTGAGAGGTTTGAGGCACATCAACAGAAAAG < 41bp 0.80109515197878 0.382443889223312 0.73079914 0.3508091 prediction 0.602190303957559 Functional Loss - DDX43 ENSG00000080007 CDS Human protein_coding chr6:74125874 chr6:74125875 nonsynonymous SNV 0.030 0 22 hPsi_associated_SNPs_7346 0 0 0 0 1 exosome 0.438718527194995 0.43871681905611 0.46159828 0 hPsi_site_12763 iPseU_CNN:0.46159828;iRNA_PseU:0 12764 chr7 79846703 79846703 1 + A G UCEC 79846702 + 79846682 79846722 41 GAAAGGACACAAAGGAAATATACACCCACTTCACATGTGCC GAAAGGACACAAAGGAAATATGCACCCACTTCACATGTGCC < 41bp 0.900808586216903 0.59972365128404 0.31110758 0.22444424 prediction 0.602169869865726 Functional Loss - GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79846702 chr7:79846703 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_7347 0 0 1 0 1 Cytosol 0.438711674495907 0.438704372022001 0 0 hPsi_site_12764 iPseU_CNN:0;iRNA_PseU:0 12765 chr1 248569756 248569756 1 + A G THYM 248569755 + 248569735 248569775 41 GCACAGCTCAACACTTCCTCTACCTTACCCTTGTGGGAGCT GCACAGCTCAACACTTCCTCTGCCTTACCCTTGTGGGAGCT < 41bp 0.905963573424387 0.60490501174874 0.6625458 0.29128152 prediction 0.602117123351293 Functional Loss - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248569755 chr1:248569756 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_7348 0 0 0 0 0 unknown 0.438718591955344 0.438718590169034 0.3250916 0 hPsi_site_12765 iPseU_CNN:0.3250916;iRNA_PseU:0 12766 chr19 39993560 39993560 1 + T G rs8107127 39993559 + 39993539 39993579 41 CAGGCGCCTGGGAGCTGCGCTTCTCGTACCGCGCGCGCTGC CAGGCGCCTGGGAGCTGCGCTGCTCGTACCGCGCGCGCTGC < 41bp 0.854724426155142 0.553670471694544 0.9327618 0.57860464 prediction 0.602107908921195 Functional Loss - DLL3 ENSG00000090932 CDS Human protein_coding chr19:39993559 chr19:39993560 nonsynonymous SNV 0.220 1 22 hPsi_associated_SNPs_7349 4 0 1 0 0 exosome 0.438713218594644 0.43871856912206 0.70831432 0 hPsi_site_12766 iPseU_CNN:0.70831432;iRNA_PseU:0 12767 chr1 167757136 167757136 1 + A G UCEC 167757135 + 167757115 167757155 41 ACAAGTCAGAGTCTGTGGTGTATGCGGATATCCGAAAGAAT ACAAGTCAGAGTCTGTGGTGTGTGCGGATATCCGAAAGAAT < 41bp 0.801046679932859 0.406235972903318 0.6795187 0.4334408 prediction 0.602093359865719 Functional Loss - MPZL1 ENSG00000197965 CDS Human protein_coding chr1:167757135 chr1:167757136 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_7350 0 0 1 0 1 Ribosome 0.438697527181138 0.438717087123342 0.3590374 0 hPsi_site_12767 iPseU_CNN:0.3590374;iRNA_PseU:0 12768 chr13 96443261 96443261 1 + A G PAAD 96443260 + 96443240 96443280 41 TTCAGCTCAGGCGGACCATTTAGATTTAAATTCCACTTCAA TTCAGCTCAGGCGGACCATTTGGATTTAAATTCCACTTCAA < 41bp 0.801042398814864 0.401097368623304 0.69909185 0.43445405 prediction 0.602084797629729 Functional Loss - DNAJC3 ENSG00000102580 CDS Human protein_coding chr13:96443260 chr13:96443261 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_7351 0 0 1 0 0 Ribosome 0.440339799545116 0.438665272075927 0.3981837 0 hPsi_site_12768 iPseU_CNN:0.3981837;iRNA_PseU:0 12769 chr2 128346067 128346067 1 + A C BRCA 128346066 + 128346046 128346086 41 GGAGATATTCAACTTGGAGTTAGCAGAGACCAAGCTGGGCC GGAGATATTCAACTTGGAGTTCGCAGAGACCAAGCTGGGCC < 41bp 0.801030619229375 0.422066426195948 0.61136407 0.32584286 prediction 0.602061238458749 Functional Loss - MYO7B ENSG00000169994 CDS Human protein_coding chr2:128346066 chr2:128346067 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_7352 0 0 0 0 1 exosome 0.438716131589749 0.438718582274289 0.22272814 0 hPsi_site_12769 iPseU_CNN:0.22272814;iRNA_PseU:0 12770 chr6 116439063 116439063 1 + A G rs34930040 116439062 + 116439042 116439082 41 ACATTTGATTTTTGGAAGGATATAGTTGCTGCTATACAACA ACATTTGATTTTTGGAAGGATGTAGTTGCTGCTATACAACA < 41bp 0.801011809471115 0.401651405262742 0.33932287 0.28386527 prediction 0.60202361894223 Functional Loss - NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116439062 chr6:116439063 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_7353 0 0 0 0 1 Cytosol 0.438349963198397 0.438156028958195 0 0 hPsi_site_12770 iPseU_CNN:0;iRNA_PseU:0 12771 chr1 9780916 9780916 1 + A G COAD 9780915 + 9780895 9780935 41 GGAGCACTTCCCGGAGGCGCTAGCCCGGCTGCTGCTGGTCA GGAGCACTTCCCGGAGGCGCTGGCCCGGCTGCTGCTGGTCA < 41bp 0.800937381209135 0.364273976165496 0.7065113 0.2704318 prediction 0.601874762418271 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9780915 chr1:9780916 synonymous SNV . 0 22 hPsi_associated_SNPs_7354 0 0 1 0 1 Nucleus 0.438718575405862 0.438718592540296 0.4130226 0 hPsi_site_12771 iPseU_CNN:0.4130226;iRNA_PseU:0 12772 chr2 111922327 111922327 1 + A G rs577007904 111922326 + 111922306 111922346 41 TTAAACAGGGAGACGTGTGATATACTCCCTCCCTTCCCTAC TTAAACAGGGAGACGTGTGATGTACTCCCTCCCTTCCCTAC < 41bp 0.800936425463984 0.449138800270278 0.7072854 0.49548978 prediction 0.601872850927968 Functional Loss - BCL2L11 ENSG00000153094 UTR3 Human protein_coding chr2:111922326 chr2:111922327 . . 0 22 hPsi_associated_SNPs_7355 0 0 1 0 0 Nucleus 0.438719285406377 0.438752788872041 0.4145708 0 hPsi_site_12772 iPseU_CNN:0.4145708;iRNA_PseU:0 12773 chr3 111766773 111766773 1 + T G UCEC 111766772 + 111766752 111766792 41 TGTCACTGACTCCCTGACCATTTACGACTCCCTTTTGCCCA TGTCACTGACTCCCTGACCATGTACGACTCCCTTTTGCCCA < 41bp 0.800901394702606 0.466723247568446 0.4372781 0.31241795 prediction 0.601802789405212 Functional Loss - TMPRSS7 ENSG00000176040 CDS Human protein_coding chr3:111766772 chr3:111766773 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_7356 0 0 0 0 1 exosome 0.438991524169322 0.440000045584355 0 0 hPsi_site_12773 iPseU_CNN:0;iRNA_PseU:0 12774 chr3 183469906 183469906 1 + A G rs200866981 183469905 + 183469885 183469925 41 CATTCTCTCGGAGAAGACTGTATCTATCCTCAGTCCTCGGA CATTCTCTCGGAGAAGACTGTGTCTATCCTCAGTCCTCGGA < 41bp 0.800900602464227 0.370550233942519 0.80609083 0.39829573 prediction 0.601801204928455 Functional Loss - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183469905 chr3:183469906 nonsynonymous SNV 0.147 0 22 hPsi_associated_SNPs_7357 0 0 1 0 1 Nucleus 0.439139172506417 0.438821817750601 0.61218166 0 hPsi_site_12774 iPseU_CNN:0.61218166;iRNA_PseU:0 12775 chr7 26331539 26331539 1 + A G rs560593863 26331538 + 26331518 26331558 41 GAGCGCGGGCGCGGGGCCGCTACGTGCGCGGGGAGCGCGGG GAGCGCGGGCGCGGGGCCGCTGCGTGCGCGGGGAGCGCGGG < 41bp 0.882722577654327 0.581846603386621 0.8942604 0.32169592 prediction 0.601751948535411 Functional Loss - SNX10 ENSG00000086300 upstream Human protein_coding chr7:26331538 chr7:26331539 . . 0 22 hPsi_associated_SNPs_7358 0 0 1 0 0 membrane 0.438719099334126 0.438718986137792 0.7885208 0 hPsi_site_12775 iPseU_CNN:0.7885208;iRNA_PseU:0 12776 chr11 6942465 6942465 1 + T G STAD 6942464 + 6942444 6942484 41 TTCACACTCCCATGTATTTTTTTCTTAGAAATCTCTCCTTT TTCACACTCCCATGTATTTTTGTCTTAGAAATCTCTCCTTT < 41bp 0.802406865366504 0.50154488712919 0.426891 0.34167853 prediction 0.601723956474628 Functional Loss - OR2D3 ENSG00000178358 CDS Human protein_coding chr11:6942464 chr11:6942465 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7359 0 0 0 0 0 unknown 0.438709393627472 0.43897629709464 0 0 hPsi_site_12776 iPseU_CNN:0;iRNA_PseU:0 12777 chr6 123332236 123332236 1 + A G UCEC 123332235 + 123332215 123332255 41 GTTTTGATCATAGACTGGAGTAACTTCACTTTCAAGCAAGC GTTTTGATCATAGACTGGAGTGACTTCACTTTCAAGCAAGC < 41bp 0.800831922925995 0.375529634408877 0.40127435 0.24510476 prediction 0.60166384585199 Functional Loss - CLVS2 ENSG00000146352 CDS Human protein_coding chr6:123332235 chr6:123332236 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7360 0 0 0 0 1 exosome 0.438724715729797 0.438736886424055 0 0 hPsi_site_12777 iPseU_CNN:0;iRNA_PseU:0 not provided not provided 12778 chr17 57288779 57288779 1 + A G UCEC 57288778 + 57288758 57288798 41 TCTCAGCAGCTTCAAAACTGTATGAGGTGGCTATTGATGGG TCTCAGCAGCTTCAAAACTGTGTGAGGTGGCTATTGATGGG < 41bp 0.800826998202448 0.384685929566902 0.40803593 0.24039114 prediction 0.601653996404896 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57288778 chr17:57288779 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7361 0 0 1 0 0 chromatin 0.438717240459226 0.438725889222006 0 0 hPsi_site_12778 iPseU_CNN:0;iRNA_PseU:0 12779 chr22 20130716 20130716 1 + A G SKCM 20130715 + 20130695 20130735 41 GGGCGACCCGCCACGGCCCCTACCCCGCAGCTTCAGCCCCG GGGCGACCCGCCACGGCCCCTGCCCCGCAGCTTCAGCCCCG < 41bp 0.800815838437438 0.383373295295279 0.6809059 0.2820324 prediction 0.601631676874875 Functional Loss - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20130715 chr22:20130716 synonymous SNV . 0 22 hPsi_associated_SNPs_7362 0 0 1 0 0 Endoplasmic reticulum 0.438788884133269 0.439264517385332 0.3618118 0 hPsi_site_12779 iPseU_CNN:0.3618118;iRNA_PseU:0 12780 chr4 100208068 100208068 1 + T C LGG 100208069 - 100208049 100208089 41 GACCCCACTTCCTGTGATTTTAGGCCATGAGGCAGCCGGCA GACCCCACTTCCTGTGATTTTGGGCCATGAGGCAGCCGGCA < 41bp 0.80080797342152 0.363137472000356 0.49733117 0.18662402 prediction 0.60161594684304 Functional Loss - ADH1A ENSG00000187758 CDS Human protein_coding chr4:100208069 chr4:100208068 synonymous SNV . 0 22 hPsi_associated_SNPs_7363 0 0 0 0 2 exosome 0.43871858911363 0.438760621781174 0 0 hPsi_site_12780 iPseU_CNN:0;iRNA_PseU:0 12781 chrX 136649569 136649569 1 + T G LUSC 136649568 + 136649548 136649588 41 ACCACGGGCCCGGCGCCTTCTTCCGTTATATGCGGCAGCCT ACCACGGGCCCGGCGCCTTCTGCCGTTATATGCGGCAGCCT < 41bp 0.800763894086208 0.468709885426653 0.7826128 0.4395023 prediction 0.601527788172416 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649568 chrX:136649569 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7364 0 0 1 0 0 exosome 0.438726482008641 0.438719177737636 0.5652256 0 hPsi_site_12781 iPseU_CNN:0.5652256;iRNA_PseU:0 12782 chr2 168725581 168725581 1 + T G UCEC 168725580 + 168725560 168725600 41 AGGTCTCCTGTTTGTATGTTTTGACAGTTGTGTGCTGGGCC AGGTCTCCTGTTTGTATGTTTGGACAGTTGTGTGCTGGGCC < 41bp 0.820914273316257 0.520158034940951 0.3064804 0.29088965 prediction 0.601512476750613 Functional Loss - B3GALT1 ENSG00000172318 CDS Human protein_coding chr2:168725580 chr2:168725581 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_7365 0 0 1 0 0 chromatin 0.43858922594422 0.438718593006366 0 0 hPsi_site_12782 iPseU_CNN:0;iRNA_PseU:0 12783 chr11 56128406 56128406 1 + A G rs62001032 56128405 + 56128385 56128425 41 TGTTTTGTCTATTTTAAAAATATGTTCATCAGAAGGAAGGA TGTTTTGTCTATTTTAAAAATGTGTTCATCAGAAGGAAGGA < 41bp 0.800755580819434 0.422524046015303 0.23498324 0.18815064 prediction 0.601511161638868 Functional Loss - OR8J1 ENSG00000172487 CDS Human protein_coding chr11:56128405 chr11:56128406 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_7366 0 0 0 0 0 unknown 0.438678813130334 0.438709687457946 0 0 hPsi_site_12783 iPseU_CNN:0;iRNA_PseU:0 12784 chr8 16973995 16973995 1 + T G UCEC 16973994 + 16973974 16974014 41 TGTAGCTACTGGACTCAAATTTTCACCACATTTAGTGAACA TGTAGCTACTGGACTCAAATTGTCACCACATTTAGTGAACA < 41bp 0.800754647559809 0.476222182096975 0.6207808 0.27150577 prediction 0.601509295119619 Functional Loss - MICU3 ENSG00000155970 CDS Human protein_coding chr8:16973994 chr8:16973995 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_7367 0 0 0 0 1 cytosol 0.438718586671203 0.438718592084509 0.2415616 0 hPsi_site_12784 iPseU_CNN:0.2415616;iRNA_PseU:0 12785 chrX 117883649 117883649 1 + T G SARC 117883648 + 117883628 117883668 41 TGAGTCTGCTGTGACTGAGCTTCAATGCATTTGGCACAACC TGAGTCTGCTGTGACTGAGCTGCAATGCATTTGGCACAACC < 41bp 0.800751739782372 0.457892025491725 0.68747914 0.35655758 prediction 0.601503479564745 Functional Loss - IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117883648 chrX:117883649 synonymous SNV . 0 22 hPsi_associated_SNPs_7368 0 0 1 0 2 Endoplasmic reticulum 0.436881043550325 0.438141421541344 0.37495828 0 hPsi_site_12785 iPseU_CNN:0.37495828;iRNA_PseU:0 12786 chr1 89237165 89237165 1 + A G STAD 89237164 + 89237144 89237184 41 ATTAAGGCATCATTTTAGGATAGAGTTTGCAGTAGCAGAAG ATTAAGGCATCATTTTAGGATGGAGTTTGCAGTAGCAGAAG < 41bp 0.800734481029612 0.385434960700571 0.26818877 0.22661448 prediction 0.601468962059224 Functional Loss - PKN2 ENSG00000065243 CDS Human protein_coding chr1:89237164 chr1:89237165 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_7369 0 0 1 0 2 Nucleus 0.438720455197798 0.438718594464751 0 0 hPsi_site_12786 iPseU_CNN:0;iRNA_PseU:0 12787 chr3 43389796 43389796 1 + A C UCEC 43389797 - 43389777 43389817 41 ATGCACATTTTCCACGTAGATTTCTCTTGGACTTTCACACT ATGCACATTTTCCACGTAGATGTCTCTTGGACTTTCACACT < 41bp 0.824584918980136 0.523870167232457 0.30173916 0.26028663 prediction 0.601429503495359 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389797 chr3:43389796 nonsynonymous SNV 0.599 2 22 hPsi_associated_SNPs_7370 0 0 0 0 0 Cytosol 0.438830348156769 0.438673157899874 0 0 hPsi_site_12787 iPseU_CNN:0;iRNA_PseU:0 12788 chr11 62554746 62554746 1 + A G SKCM 62554745 + 62554725 62554765 41 GCCGGTGGGCGCTCTCGGACTACTCGCTGTACTTGCCGCTC GCCGGTGGGCGCTCTCGGACTGCTCGCTGTACTTGCCGCTC < 41bp 0.800703292384947 0.379111540377981 0.7365956 0.15480071 prediction 0.601406584769894 Functional Loss - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554745 chr11:62554746 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7371 0 0 1 0 0 Ribosome 0.438725965211013 0.438702706427537 0.4731912 0 hPsi_site_12788 iPseU_CNN:0.4731912;iRNA_PseU:0 12789 chr19 6177276 6177276 1 + A C CESC 6177275 + 6177255 6177295 41 GGAGCAGTGACAAAGGACTTTAAACTGACAGACAAGCATGA GGAGCAGTGACAAAGGACTTTCAACTGACAGACAAGCATGA < 41bp 0.800698229429427 0.41504550480031 0.25672242 0.21643001 prediction 0.601396458858855 Functional Loss - ACSBG2 ENSG00000130377 CDS Human protein_coding chr19:6177275 chr19:6177276 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_7372 0 0 0 0 1 exosome 0.438725143020094 0.438668872533096 0 0 hPsi_site_12789 iPseU_CNN:0;iRNA_PseU:0 12790 chr11 22696490 22696490 1 + A G LIHC 22696489 + 22696469 22696509 41 GCATCAGTATAGCCAATGGCTAGCCAGCAGACATGAAGCTA GCATCAGTATAGCCAATGGCTGGCCAGCAGACATGAAGCTA < 41bp 0.800685290208816 0.381076685785074 0.2354159 0.1370135 prediction 0.601370580417632 Functional Loss - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22696489 chr11:22696490 synonymous SNV . 0 22 hPsi_associated_SNPs_7373 0 0 0 0 2 Endoplasmic reticulum 0.438720972885075 0.43873266152818 0 0 hPsi_site_12790 iPseU_CNN:0;iRNA_PseU:0 12791 chr4 39482963 39482963 1 + A G UCEC 39482962 + 39482942 39482982 41 ACTTCAGACGAAAGAGATTGTACAGAAATTAGAAGGCCACA ACTTCAGACGAAAGAGATTGTGCAGAAATTAGAAGGCCACA < 41bp 0.800653252041121 0.4138242150771 0.29293436 0.27053854 prediction 0.601306504082242 Functional Loss - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482962 chr4:39482963 . . 0 22 hPsi_associated_SNPs_7374 0 0 0 0 0 unknown 0.4394112258999 0.438776309068779 0 0 hPsi_site_12791 iPseU_CNN:0;iRNA_PseU:0 Hereditary breast and ovarian cancer syndrome Hereditary breast and ovarian cancer syndrome 12792 chr10 95658449 95658449 1 + T G UCEC 95658448 + 95658428 95658468 41 AGACGTCCATGCTGTAGAGATTAGTGCGTTTCGATGTGTGT AGACGTCCATGCTGTAGAGATGAGTGCGTTTCGATGTGTGT < 41bp 0.800649689744217 0.463523669510935 0.7949575 0.33433065 prediction 0.601299379488434 Functional Loss - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95658448 chr10:95658449 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7375 0 0 1 0 1 exosome 0.438374508999351 0.438976521322489 0.589915 0 hPsi_site_12792 iPseU_CNN:0.589915;iRNA_PseU:0 12793 chr1 27326757 27326757 1 + A C rs142678681 27326756 + 27326736 27326776 41 CCCAGCTGGGGTCCCCATTTTAATAGATGTCATTGCTTCAA CCCAGCTGGGGTCCCCATTTTCATAGATGTCATTGCTTCAA < 41bp 0.800649348166022 0.44024608009571 0.57091355 0.33655173 prediction 0.601298696332044 Functional Loss - TRNP1 ENSG00000253368 UTR3 Human protein_coding chr1:27326756 chr1:27326757 . . 0 22 hPsi_associated_SNPs_7376 0 0 1 0 0 nucleus 0.438718592982646 0.438718592587431 0.1418271 0 hPsi_site_12793 iPseU_CNN:0.1418271;iRNA_PseU:0 12794 chr1 93812350 93812350 1 + A G LUSC 93812349 + 93812329 93812369 41 TGCACTGAATTCATTCACCTTATATCTTCTGAAGCCAATGA TGCACTGAATTCATTCACCTTGTATCTTCTGAAGCCAATGA < 41bp 0.895690673966517 0.595053373397417 0.32909846 0.35922223 prediction 0.601274601138201 Functional Loss - DR1 ENSG00000117505 CDS Human protein_coding chr1:93812349 chr1:93812350 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_7377 0 0 1 0 1 Cytosol 0.432491275137803 0.435485455414711 0 0 hPsi_site_12794 iPseU_CNN:0;iRNA_PseU:0 12795 chr3 147128701 147128701 1 + A C SKCM 147128700 + 147128680 147128720 41 GTAGGTGGCCCGGAGCAGAGTAATCACATCTGCTTCTGGGA GTAGGTGGCCCGGAGCAGAGTCATCACATCTGCTTCTGGGA < 41bp 0.800635079909983 0.425841827850556 0.21053952 0.15249386 prediction 0.601270159819966 Functional Loss - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147128700 chr3:147128701 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_7378 0 0 0 0 0 exosome 0.438718594608098 0.438718607505946 0 0 hPsi_site_12795 iPseU_CNN:0;iRNA_PseU:0 12796 chr12 70724133 70724133 1 + T G UCEC 70724132 + 70724112 70724152 41 GGTTGGTCAGGGCATTGGAATTCCTAGCAGGACAAATAGCA GGTTGGTCAGGGCATTGGAATGCCTAGCAGGACAAATAGCA < 41bp 0.800633847033356 0.439413791518234 0.6204202 0.35655153 prediction 0.601267694066712 Functional Loss - CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70724132 chr12:70724133 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7379 0 0 1 0 1 Nucleus 0.438718596854722 0.43871859401602 0.2408404 0 hPsi_site_12796 iPseU_CNN:0.2408404;iRNA_PseU:0 12797 chr15 52356397 52356397 1 + A G BLCA 52356396 + 52356376 52356416 41 AGGTCATCATCATATTTAGATAACTTAGTTTGGAGAGAGAG AGGTCATCATCATATTTAGATGACTTAGTTTGGAGAGAGAG < 41bp 0.80061672079351 0.403034446668348 0.25792342 0.21181962 prediction 0.60123344158702 Functional Loss - MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356396 chr15:52356397 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_7380 0 0 0 0 0 Ribosome 0.438718529019469 0.438718571302709 0 0 hPsi_site_12797 iPseU_CNN:0;iRNA_PseU:0 12798 chr1 200860689 200860689 1 + A G UCEC 200860688 + 200860668 200860708 41 GATGCTGCAAATGCCGAAGTTAAATGAAATACCTCCGGGGA GATGCTGCAAATGCCGAAGTTGAATGAAATACCTCCGGGGA < 41bp 0.90229288370964 0.601704496664101 0.5582452 0.3239634 prediction 0.601176774091079 Functional Loss - C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200860688 chr1:200860689 synonymous SNV . 0 22 hPsi_associated_SNPs_7381 0 0 0 0 0 cytosol 0.438689432554704 0.438276988306716 0.1164904 0 hPsi_site_12798 iPseU_CNN:0.1164904;iRNA_PseU:0 12799 chr19 1065097 1065097 1 + T G rs190013803 1065096 + 1065076 1065116 41 GCTGCGCCCTGGCGCGCGTCTTTGGAGAGCTGGCGGTGCAC GCTGCGCCCTGGCGCGCGTCTGTGGAGAGCTGGCGGTGCAC < 41bp 0.800558333798743 0.477170958701802 0.6197193 0.34152564 prediction 0.601116667597485 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1065096 chr19:1065097 nonsynonymous SNV 0.143 4 22 hPsi_associated_SNPs_7382 0 0 0 0 1 Endoplasmic reticulum 0.438718449287972 0.438730819315019 0.2394386 0 hPsi_site_12799 iPseU_CNN:0.2394386;iRNA_PseU:0 12800 chr3 98002139 98002139 1 + A G HNSC 98002138 + 98002118 98002158 41 AGCCATATGCAAACCTTTACTATATCCAGTGATTATGAACA AGCCATATGCAAACCTTTACTGTATCCAGTGATTATGAACA < 41bp 0.800558016429875 0.405310077113062 0.5937015 0.23059565 prediction 0.601116032859749 Functional Loss - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98002138 chr3:98002139 synonymous SNV . 0 22 hPsi_associated_SNPs_7383 0 0 0 0 0 unknown 0.438718591958607 0.438718599668555 0.187403 0 hPsi_site_12800 iPseU_CNN:0.187403;iRNA_PseU:0 12801 chr3 143708440 143708440 1 + T G UCEC 143708439 + 143708419 143708459 41 ATCATTTTCAAAAGAAATTCTTTGTGCTCGTGCCACTGTGG ATCATTTTCAAAAGAAATTCTGTGTGCTCGTGCCACTGTGG < 41bp 0.800553808457232 0.468779906618342 0.30697703 0.276878 prediction 0.601107616914465 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143708439 chr3:143708440 synonymous SNV . 0 22 hPsi_associated_SNPs_7384 0 0 1 0 1 Ribosome 0.438410045465254 0.437956941028724 0 0 hPsi_site_12801 iPseU_CNN:0;iRNA_PseU:0 12802 chr12 29446289 29446289 1 + T G SKCM 29446288 + 29446268 29446308 41 GCATGAGAAGATCAGAGCTATTTATGCAGATCTCAATCAGA GCATGAGAAGATCAGAGCTATGTATGCAGATCTCAATCAGA < 41bp 0.80054723058997 0.457046327040928 0.38637173 0.29991645 prediction 0.60109446117994 Functional Loss - FAR2 ENSG00000064763 CDS Human protein_coding chr12:29446288 chr12:29446289 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_7385 0 0 0 0 1 Cytosol 0.438484930932718 0.445281396718883 0 0 hPsi_site_12802 iPseU_CNN:0;iRNA_PseU:0 12803 chr6 126202283 126202283 1 + A G rs111934298 126202282 + 126202262 126202302 41 TCCTTCCAGTACCTTAAGGCTATCATCATCCAGTCCTGGTG TCCTTCCAGTACCTTAAGGCTGTCATCATCCAGTCCTGGTG < 41bp 0.800545259119903 0.384474028036104 0.43882978 0.32762083 prediction 0.601090518239807 Functional Loss - NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126202282 chr6:126202283 synonymous SNV . 0 22 hPsi_associated_SNPs_7386 0 0 1 0 2 Ribosome 0.43871859340985 0.438718592910301 0 0 hPsi_site_12803 iPseU_CNN:0;iRNA_PseU:0 12804 chr12 100691891 100691891 1 + A G LUAD 100691890 + 100691870 100691910 41 TGGGAAAATCTACCTTCCCCTATATCTCCAGACATTAAGGA TGGGAAAATCTACCTTCCCCTGTATCTCCAGACATTAAGGA < 41bp 0.800540579108099 0.393138849933802 0.2048395 0.1433562 prediction 0.601081158216198 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100691890 chr12:100691891 nonsynonymous SNV 0.295 0 22 hPsi_associated_SNPs_7387 0 0 1 0 2 chromatin 0.43871889303679 0.438718593162254 0 0 hPsi_site_12804 iPseU_CNN:0;iRNA_PseU:0 12805 chr3 122849389 122849389 1 + A G rs576495906 122849388 + 122849368 122849408 41 CAGATGAGGGCGGCTCCGTTTATCACCTGACCGATGAAGAC CAGATGAGGGCGGCTCCGTTTGTCACCTGACCGATGAAGAC < 41bp 0.919275436885616 0.618741406810996 0.7459424 0.5804742 prediction 0.601068060149238 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122849388 chr3:122849389 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7388 0 0 1 0 2 Endoplasmic reticulum 0.438494440593839 0.446462896718255 0.3309364 0 hPsi_site_12805 iPseU_CNN:0.3309364;iRNA_PseU:0 12806 chr16 5127460 5127460 1 + T G rs112668461 5127459 + 5127439 5127479 41 TTTTCAGGTACGAGAAGTTCTTTGGGCGCCTGTCCCACCTG TTTTCAGGTACGAGAAGTTCTGTGGGCGCCTGTCCCACCTG < 41bp 0.800489041308786 0.450835106256272 0.6724978 0.4049836 prediction 0.600978082617571 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127459 chr16:5127460 nonsynonymous SNV 0.561 1 22 hPsi_associated_SNPs_7389 1 0 1 0 2 Ribosome 0.438718430158481 0.43872066861103 0.3449956 0 hPsi_site_12806 iPseU_CNN:0.3449956;iRNA_PseU:0 12807 chr7 143657708 143657708 1 + T G STAD 143657707 + 143657687 143657727 41 GACACCCTTCTGCCTGGTTCTTTTGTCCTACATCCAGATCA GACACCCTTCTGCCTGGTTCTGTTGTCCTACATCCAGATCA < 41bp 0.809769412934236 0.509282321946288 0.68251866 0.71351594 prediction 0.600974181975896 Functional Loss - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657707 chr7:143657708 synonymous SNV . 0 22 hPsi_associated_SNPs_7390 0 0 0 0 0 unknown 0.438718622123553 0.438720130107741 0 0 hPsi_site_12807 iPseU_CNN:0;iRNA_PseU:0 12808 chr17 37792293 37792293 1 + A G rs734645 37792292 + 37792272 37792312 41 GTTTGCCCACCTTTGGCTGATACCCAGAGAACCTGGGCACT GTTTGCCCACCTTTGGCTGATGCCCAGAGAACCTGGGCACT < 41bp 0.903445734114112 0.602964725872937 0.42753187 0.24730447 prediction 0.60096201648235 Functional Loss - PPP1R1B ENSG00000131771 UTR3 Human protein_coding chr17:37792292 chr17:37792293 . . 0 22 hPsi_associated_SNPs_7391 0 0 0 2 0 Ribosome 0.438718592578232 0.438718592995082 0 0 hPsi_site_12808 iPseU_CNN:0;iRNA_PseU:0 12809 chr4 57883381 57883381 1 + A G LAML 57883380 + 57883360 57883400 41 ATCCTTGGTGTCTGTGCATCTATTATTCCCTTTCCTGATCA ATCCTTGGTGTCTGTGCATCTGTTATTCCCTTTCCTGATCA < 41bp 0.800478780494819 0.38424235110504 0.4642603 0.31939644 prediction 0.600957560989638 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57883380 chr4:57883381 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7392 0 0 1 0 1 Nucleus 0.43871963765327 0.43872156412259 0 0 hPsi_site_12809 iPseU_CNN:0;iRNA_PseU:0 12810 chr20 17950517 17950517 1 + A G UCEC 17950516 + 17950496 17950536 41 AATCTGAATGAAGATGAAGTTATTTCAGACCATTTGCAGGC AATCTGAATGAAGATGAAGTTGTTTCAGACCATTTGCAGGC < 41bp 0.800475753033136 0.392189252914958 0.8251209 0.620863 prediction 0.600951506066272 Functional Loss - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950516 chr20:17950517 synonymous SNV . 0 22 hPsi_associated_SNPs_7393 0 0 1 0 0 chromatin 0.438694322695904 0.438657799260525 0.4085158 0 hPsi_site_12810 iPseU_CNN:0.4085158;iRNA_PseU:0 12811 chr7 2686796 2686796 1 + T G LUSC 2686795 + 2686775 2686815 41 GCGCCGGCATCGCAGTGGGATTCTACGGCAACGGGGAGACC GCGCCGGCATCGCAGTGGGATGCTACGGCAACGGGGAGACC < 41bp 0.865742697725353 0.565295690967275 0.7107968 0.41993478 prediction 0.600894013516157 Functional Loss - TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686795 chr7:2686796 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_7394 0 0 1 0 2 Ribosome 0.438689600660753 0.43871847992674 0.4215936 0 hPsi_site_12811 iPseU_CNN:0.4215936;iRNA_PseU:0 12812 chr2 239007232 239007232 1 + A G rs28576957 239007231 + 239007211 239007251 41 CCCACATGGGACCGCCCACATAGGACCGCCCACATAGGACC CCCACATGGGACCGCCCACATGGGACCGCCCACATAGGACC < 41bp 0.800441899222271 0.412294163841248 0.19641805 0.1569207 prediction 0.600883798444542 Functional Loss - UBE2F-SCLY ENSG00000132330;ENSG00000258984 UTR3 Human other chr2:239007231 chr2:239007232 . . 0 22 hPsi_associated_SNPs_7395 0 0 0 0 0 exosome 0.438718522934663 0.438720596913949 0 0 hPsi_site_12812 iPseU_CNN:0;iRNA_PseU:0 12813 chr5 112228351 112228351 1 + A C ACC 112228352 - 112228332 112228372 41 CCCAGAATTCATTGTTGGGATTTCTGAACACATGAAGAAAG CCCAGAATTCATTGTTGGGATGTCTGAACACATGAAGAAAG < 41bp 0.800411106696013 0.473816944292725 0.33869654 0.21632388 prediction 0.600822213392025 Functional Loss - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112228352 chr5:112228351 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_7396 0 0 0 0 0 Ribosome 0.438722883779679 0.43875218471438 0 0 hPsi_site_12813 iPseU_CNN:0;iRNA_PseU:0 12814 chr12 123467043 123467043 1 + A G COAD 123467042 + 123467022 123467062 41 TAAGGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAG TAAGGGAGATGGCGAGGTCCTGGAGGAAATCGTAACCAAAG < 41bp 0.800408923747992 0.389768246497786 0.315036 0.16997257 prediction 0.600817847495983 Functional Loss - ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123467042 chr12:123467043 synonymous SNV . 0 22 hPsi_associated_SNPs_7397 0 0 1 1 2 Cytosol 0.438718600305577 0.438718592992272 0 0 hPsi_site_12814 iPseU_CNN:0;iRNA_PseU:0 12815 chr19 38794895 38794895 1 + T C rs2304176 38794896 - 38794876 38794916 41 CAGGTCGAACTCCATGGCGGTAAGAGAAGTTGGGTCCTAAG CAGGTCGAACTCCATGGCGGTGAGAGAAGTTGGGTCCTAAG < 41bp 0.800407480339697 0.406693062254071 0.8390447 0.30122405 prediction 0.600814960679395 Functional Loss - C19orf33;YIF1B ENSG00000167644 UTR5 Human protein_coding chr19:38794896 chr19:38794895 . . 0 22 hPsi_associated_SNPs_7398 0 1 0 0 0 unknown 0.438718590152096 0.438718390056307 0.6780894 0 hPsi_site_12815 iPseU_CNN:0.6780894;iRNA_PseU:0 12816 chr2 70314950 70314950 1 + A G KIRP 70314949 + 70314929 70314969 41 TCTTATGCACGGAAAGGAAGTAGGAAGCATCATTGGGAAGA TCTTATGCACGGAAAGGAAGTGGGAAGCATCATTGGGAAGA < 41bp 0.800398698576114 0.396493840531521 0.28308105 0.28296366 prediction 0.600797397152229 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70314949 chr2:70314950 synonymous SNV . 0 22 hPsi_associated_SNPs_7399 0 0 1 0 0 Cytosol 0.438733396342093 0.438718592988736 0 0 hPsi_site_12816 iPseU_CNN:0;iRNA_PseU:0 12817 chr10 120896526 120896526 1 + A C rs563187337 120896525 + 120896505 120896545 41 GTAGGCATAAGCTAATGGTTTATTTTCAGAAAGCTGCCTGA GTAGGCATAAGCTAATGGTTTCTTTTCAGAAAGCTGCCTGA < 41bp 0.868431505516881 0.568034223924165 0.6204269 0.5548094 prediction 0.600794563185432 Functional Loss - FAM45BP ENSG00000119979 UTR3 Human protein_coding chr10:120896525 chr10:120896526 . . 0 22 hPsi_associated_SNPs_7400 0 0 0 0 0 unknown 0.438718476140302 0.438718598817854 0.131235 0 hPsi_site_12817 iPseU_CNN:0.131235;iRNA_PseU:0 12818 chr19 56515392 56515392 1 + A G UCEC 56515391 + 56515371 56515411 41 GGAGCATCGCTGGCCTGGGCTACGTCCATTAGCATCTTTGA GGAGCATCGCTGGCCTGGGCTGCGTCCATTAGCATCTTTGA < 41bp 0.800391022475255 0.373443047681339 0.5169939 0.319696 prediction 0.600782044950511 Functional Loss - NLRP5 ENSG00000171487 CDS Human protein_coding chr19:56515391 chr19:56515392 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_7401 0 0 0 0 1 unknown 0.438718696881115 0.43871666284932 0.0339878 0 hPsi_site_12818 iPseU_CNN:0.0339878;iRNA_PseU:0 12819 chr12 9810841 9810841 1 + A G rs79019311 9810840 + 9810820 9810860 41 TGGAAGCGTTCGCAATCAGCTATAGTCCAAAATTGCTAATT TGGAAGCGTTCGCAATCAGCTGTAGTCCAAAATTGCTAATT < 41bp 0.80038948415879 0.435196294547954 0.87408817 0.62568206 prediction 0.600778968317581 Functional Loss - LOC374443 ENSG00000256594 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr12:9810840 chr12:9810841 . . 0 22 hPsi_associated_SNPs_7402 0 0 0 0 0 unknown 0.438958035191713 0.439389876797966 0.49681222 0 hPsi_site_12819 iPseU_CNN:0.49681222;iRNA_PseU:0 12820 chr19 4944410 4944410 1 + A G LUAD 4944409 + 4944389 4944429 41 CCATCGTCCCGTCCAACCACTACGGACCCATCCCGGGGATC CCATCGTCCCGTCCAACCACTGCGGACCCATCCCGGGGATC < 41bp 0.800382263649112 0.369843025698363 0.78896046 0.28092963 prediction 0.600764527298224 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944409 chr19:4944410 . 0.989 3 22 hPsi_associated_SNPs_7403 0 0 1 2 2 chromatin 0.438698070502865 0.437605265729972 0.57792092 0 hPsi_site_12820 iPseU_CNN:0.57792092;iRNA_PseU:0 not specified not specified 12821 chr1 75202277 75202277 1 + A G OV 75202276 + 75202256 75202296 41 AACTGTTGCTGGCTACTGGTTACACACAAACTTTGTGTAAA AACTGTTGCTGGCTACTGGTTGCACACAAACTTTGTGTAAA < 41bp 0.901812433301586 0.601454628206914 0.9652857 0.55701154 prediction 0.600715610189343 Functional Loss - TYW3 ENSG00000162623 CDS Human protein_coding chr1:75202276 chr1:75202277 nonsynonymous SNV 0.985 2 22 hPsi_associated_SNPs_7404 0 0 1 0 1 chromatin 0.438737126518073 0.438668320168196 0.81654832 0 hPsi_site_12821 iPseU_CNN:0.81654832;iRNA_PseU:0 12822 chr6 160176386 160176386 1 + A G UCEC 160176385 + 160176365 160176405 41 TCTTCTCCAGGGAATGGTAATAAGTCCTCCAACAGCTCAGA TCTTCTCCAGGGAATGGTAATGAGTCCTCCAACAGCTCAGA < 41bp 0.800339282410562 0.384281913490297 0.33414534 0.25952643 prediction 0.600678564821125 Functional Loss - WTAP ENSG00000146457 CDS Human protein_coding chr6:160176385 chr6:160176386 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_7405 0 0 1 0 0 chromatin 0.43871442423873 0.438790965773405 0 0 hPsi_site_12822 iPseU_CNN:0;iRNA_PseU:0 12823 chr16 30780626 30780626 1 + A G COAD 30780625 + 30780605 30780645 41 GGATGATGCCAACTTTAAGCTAATGTCAGAGCGGATCAAGG GGATGATGCCAACTTTAAGCTGATGTCAGAGCGGATCAAGG < 41bp 0.800336304564823 0.362803332545487 0.6535247 0.33819398 prediction 0.600672609129647 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30780625 chr16:30780626 synonymous SNV . 0 22 hPsi_associated_SNPs_7406 0 0 1 0 1 Ribosome 0.438718592941192 0.437976231214092 0.3070494 0 hPsi_site_12823 iPseU_CNN:0.3070494;iRNA_PseU:0 12824 chr6 26459768 26459768 1 + A G SKCM 26459767 + 26459747 26459787 41 GCCACGGTTGGAGAAAACACTACGTTACGCTGCCATCTGTC GCCACGGTTGGAGAAAACACTGCGTTACGCTGCCATCTGTC < 41bp 0.920428624376855 0.620097616509671 0.6107292 0.32363594 prediction 0.600662015734369 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26459767 chr6:26459768 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_7407 0 0 1 0 1 Endoplasmic reticulum 0.430325096596909 0.437510169700179 0.2214584 0 hPsi_site_12824 iPseU_CNN:0.2214584;iRNA_PseU:0 12825 chr12 132466077 132466077 1 + A G UCEC 132466076 + 132466056 132466096 41 TGAAGTGGGTCACCAAGGGGTAGTTTTCCAGCACCCAGGGG TGAAGTGGGTCACCAAGGGGTGGTTTTCCAGCACCCAGGGG < 41bp 0.800320714152437 0.394491024875879 0.63050365 0.29497078 prediction 0.600641428304874 Functional Loss - EP400 ENSG00000183495 CDS Human protein_coding chr12:132466076 chr12:132466077 synonymous SNV . 0 22 hPsi_associated_SNPs_7408 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0.2610073 0 hPsi_site_12825 iPseU_CNN:0.2610073;iRNA_PseU:0 12826 chr14 20586311 20586311 1 + A G LAML 20586310 + 20586290 20586330 41 TCATTATTTTGCTTATCTCCTACAGTCTGATCCTCATAACC TCATTATTTTGCTTATCTCCTGCAGTCTGATCCTCATAACC < 41bp 0.800285839468833 0.403620830099058 0.40433377 0.25772193 prediction 0.600571678937666 Functional Loss - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586310 chr14:20586311 nonsynonymous SNV 0.870 3 22 hPsi_associated_SNPs_7409 0 0 0 0 0 unknown 0.438719845595866 0.438718147189325 0 0 hPsi_site_12826 iPseU_CNN:0;iRNA_PseU:0 12827 chr5 154396480 154396480 1 + A G HNSC 154396479 + 154396459 154396499 41 CCAGACTCTTCTTTTGAATATATCCCACCTAAGCCAAAACC CCAGACTCTTCTTTTGAATATGTCCCACCTAAGCCAAAACC < 41bp 0.800273897366701 0.402525742669746 0.7923093 0.685492 prediction 0.600547794733401 Functional Loss - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154396479 chr5:154396480 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_7410 0 0 0 0 0 exosome 0.43871859294416 0.438718592925455 0.2136346 0 hPsi_site_12827 iPseU_CNN:0.2136346;iRNA_PseU:0 12828 chr15 30927322 30927322 1 + A C UCEC 30927321 + 30927301 30927341 41 GGATAGCAGCAATCTTGCAGTAATATTTGCACCAAATCTTC GGATAGCAGCAATCTTGCAGTCATATTTGCACCAAATCTTC < 41bp 0.800271005221598 0.425713201540029 0.5217272 0.2818664 prediction 0.600542010443196 Functional Loss - ARHGAP11B ENSG00000187951 CDS Human protein_coding chr15:30927321 chr15:30927322 synonymous SNV . 0 22 hPsi_associated_SNPs_7411 0 0 1 7 2 chromatin 0.438718700638765 0.436619013246372 0.0434543999999999 0 hPsi_site_12828 iPseU_CNN:0.0434543999999999;iRNA_PseU:0 12829 chr2 27890212 27890212 1 + A G HNSC 27890211 + 27890191 27890231 41 CAGGAAAGGGAGGCCTTTTATATAAAGGATCCCAAAAAGGC CAGGAAAGGGAGGCCTTTTATGTAAAGGATCCCAAAAAGGC < 41bp 0.800260897462213 0.370563950535397 0.37899595 0.2542328 prediction 0.600521794924426 Functional Loss - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27890211 chr2:27890212 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_7412 0 0 1 0 2 nucleoplasm 0.438718598218102 0.438718690371972 0 0 hPsi_site_12829 iPseU_CNN:0;iRNA_PseU:0 12830 chr11 55798533 55798533 1 + A C rs17528803 55798532 + 55798512 55798552 41 CCAGACCAGCACTTTTGTGGTAATATTTATTTCTTACTTCT CCAGACCAGCACTTTTGTGGTCATATTTATTTCTTACTTCT < 41bp 0.860353565249169 0.560095615063892 0.24281901 0.19470182 prediction 0.600515900370554 Functional Loss - OR5AS1 ENSG00000181785 CDS Human protein_coding chr11:55798532 chr11:55798533 synonymous SNV . 0 22 hPsi_associated_SNPs_7413 0 0 0 0 0 unknown 0.433552087258941 0.438683626999317 0 0 hPsi_site_12830 iPseU_CNN:0;iRNA_PseU:0 12831 chr7 75511177 75511177 1 + A G UCEC 75511176 + 75511156 75511196 41 TGGTAACCTACATCTTTGTCTACGAGAATCCCATCTCCCTG TGGTAACCTACATCTTTGTCTGCGAGAATCCCATCTCCCTG < 41bp 0.865350702130648 0.565118782520865 0.6197011 0.29735085 prediction 0.600463839219567 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75511176 chr7:75511177 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_7414 0 0 1 0 1 Endoplasmic reticulum 0.43869148227205 0.438712565506697 0.2394022 0 hPsi_site_12831 iPseU_CNN:0.2394022;iRNA_PseU:0 12832 chr14 66208932 66208932 1 + A C HNSC 66208931 + 66208911 66208951 41 CCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACT CCCACAATCAAATTGCCATTTCTGCTCACCAACCCCGAACT < 41bp 0.863853496430736 0.563623263863435 0.32311815 0.27397087 prediction 0.600460465134602 Functional Loss - FUT8 ENSG00000033170 CDS Human protein_coding chr14:66208931 chr14:66208932 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_7415 0 0 1 0 0 Endoplasmic reticulum 0.438853016619121 0.438718907465184 0 0 hPsi_site_12832 iPseU_CNN:0;iRNA_PseU:0 12833 chr20 18163876 18163876 1 + T C STAD 18163875 + 18163855 18163895 41 GAGCCCGACGCACCTCTCGATTACTGTTATGTGCGGCCAAA GAGCCCGACGCACCTCTCGATCACTGTTATGTGCGGCCAAA < 41bp 0.812582682826545 0.51235747770093 0.7279156 0.4067526 prediction 0.600450410251229 Functional Loss - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18163875 chr20:18163876 nonsynonymous SNV 0.951 4 22 hPsi_associated_SNPs_7416 0 0 0 0 1 Nucleus 0.438714944908552 0.43871666320425 0.4558312 0 hPsi_site_12833 iPseU_CNN:0.4558312;iRNA_PseU:0 12834 chr15 48434487 48434487 1 + T C rs146726548 48434488 - 48434468 48434508 41 CCAAGTTCATATAGAACTGATAATGTAGCAAGCCCCAAGTA CCAAGTTCATATAGAACTGATGATGTAGCAAGCCCCAAGTA < 41bp 0.800213018219738 0.393574287713736 0.33342898 0.31632894 prediction 0.600426036439477 Functional Loss - SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48434488 chr15:48434487 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_7417 1 0 1 2 0 exosome 0.43871914462628 0.438719189943183 0 0 hPsi_site_12834 iPseU_CNN:0;iRNA_PseU:0 12835 chr15 82575073 82575073 1 + T G ESCA 82575072 + 82575052 82575092 41 AAGCATCATGAAAGAAGATTTTCCAGCATGGGAAAGTTGTC AAGCATCATGAAAGAAGATTTGCCAGCATGGGAAAGTTGTC < 41bp 0.834353906401506 0.534148776946481 0.44942868 0.2442491 prediction 0.60041025891005 Functional Loss - SAXO2 ENSG00000188659 CDS Human protein_coding chr15:82575072 chr15:82575073 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_7418 0 0 0 0 0 nucleus 0.438791596940119 0.438722693361481 0 0 hPsi_site_12835 iPseU_CNN:0;iRNA_PseU:0 12836 chr12 55641295 55641295 1 + A G rs4388990 55641294 + 55641274 55641314 41 AAGTCTCATTCACAACTGTCTACATTCCCAAATTTCTTGTT AAGTCTCATTCACAACTGTCTGCATTCCCAAATTTCTTGTT < 41bp 0.892746182148915 0.59254161558579 0.28884888 0.27761656 prediction 0.600409133126249 Functional Loss - OR6C74 ENSG00000197706 CDS Human protein_coding chr12:55641294 chr12:55641295 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_7419 0 0 0 0 0 unknown 0.438761249961779 0.438642401655802 0 0 hPsi_site_12836 iPseU_CNN:0;iRNA_PseU:0 12837 chr19 9492313 9492313 1 + T G SKCM 9492312 + 9492292 9492332 41 TGTGGGAAGGCCTTTAGGAATTCCTCTTGCCTGAGGGTACA TGTGGGAAGGCCTTTAGGAATGCCTCTTGCCTGAGGGTACA < 41bp 0.800201412243559 0.496725684442376 0.5843803 0.28303665 prediction 0.600402824487118 Functional Loss - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9492312 chr19:9492313 nonsynonymous SNV 0.250 0 22 hPsi_associated_SNPs_7420 0 0 1 0 0 unknown 0.438718592997575 0.438718592995437 0.1687606 0 hPsi_site_12837 iPseU_CNN:0.1687606;iRNA_PseU:0 12838 chr17 41477900 41477900 1 + A C rs143430693 41477899 + 41477879 41477919 41 GGAGATGGGATGTCTTTGCATATCTCTCTCATCCTCTCTGG GGAGATGGGATGTCTTTGCATCTCTCTCTCATCCTCTCTGG < 41bp 0.872767096578324 0.572579568638565 0.7373642 0.34057772 prediction 0.600375055879518 Functional Loss - ARL4D ENSG00000175906 UTR3 Human protein_coding chr17:41477899 chr17:41477900 . . 0 22 hPsi_associated_SNPs_7421 0 0 1 0 0 Cytosol 0.438713632665628 0.438727770710162 0.4747284 0 hPsi_site_12838 iPseU_CNN:0.4747284;iRNA_PseU:0 12839 chr11 94803043 94803043 1 + A G rs680673 94803042 + 94803022 94803062 41 GGTGGCGAAGGGAGGTGAGGTATATTTATTAAATGGGACCG GGTGGCGAAGGGAGGTGAGGTGTATTTATTAAATGGGACCG < 41bp 0.899030105535138 0.598843459945344 0.3307625 0.179907 prediction 0.600373291179588 Functional Loss - SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94803042 chr11:94803043 . . 0 22 hPsi_associated_SNPs_7422 0 0 0 1 0 Cytosol 0.43872433028655 0.438718874034179 0 0 hPsi_site_12839 iPseU_CNN:0;iRNA_PseU:0 12840 chr17 3214146 3214146 1 + A G UCEC 3214145 + 3214125 3214165 41 CCAATGTGATCAATCACTTCTACTGTGACCTCCCACAGCCC CCAATGTGATCAATCACTTCTGCTGTGACCTCCCACAGCCC < 41bp 0.80017192412396 0.41392922147968 0.31710905 0.23298347 prediction 0.60034384824792 Functional Loss - OR3A4P ENSG00000180068 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:3214145 chr17:3214146 . . 0 22 hPsi_associated_SNPs_7423 0 0 0 0 0 unknown 0.43871857362386 0.438718610933054 0 0 hPsi_site_12840 iPseU_CNN:0;iRNA_PseU:0 12841 chr3 124456921 124456921 1 + T G UCEC 124456920 + 124456900 124456940 41 CTGTTGCAGCTAGCAGATGCTTTAGGACCTAGTATCTGCAT CTGTTGCAGCTAGCAGATGCTGTAGGACCTAGTATCTGCAT < 41bp 0.839529189152103 0.53935893548145 0.59333813 0.37314877 prediction 0.600340507341307 Functional Loss - UMPS ENSG00000114491 CDS Human protein_coding chr3:124456920 chr3:124456921 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_7424 0 0 1 0 0 Ribosome 0.439473083247612 0.438513227899602 0.18667626 0 hPsi_site_12841 iPseU_CNN:0.18667626;iRNA_PseU:0 12842 chr9 131483159 131483159 1 + A G rs528140930 131483158 + 131483138 131483178 41 AGTGATATGGTTTGTCTTTTTAAGACTGGACTTGCTTTATA AGTGATATGGTTTGTCTTTTTGAGACTGGACTTGCTTTATA < 41bp 0.800156741477913 0.458568876452271 0.3022758 0.19934022 prediction 0.600313482955826 Functional Loss - PKN3;ZDHHC12 ENSG00000160446;ENSG00000160447 UTR3 Human other chr9:131483158 chr9:131483159 . . 0 22 hPsi_associated_SNPs_7425 0 0 1 1 0 unknown 0.43871859300655 0.438722966159003 0 0 hPsi_site_12842 iPseU_CNN:0;iRNA_PseU:0 12843 chr12 14975979 14975979 1 + T G GBM 14975978 + 14975958 14975998 41 TAAACACACTGACTGAATTGTTTAGCCGCAGTATGAATACT TAAACACACTGACTGAATTGTGTAGCCGCAGTATGAATACT < 41bp 0.831462646889965 0.53132719468345 0.57589364 0.32118434 prediction 0.600270904413031 Functional Loss - C12orf60 ENSG00000182993 CDS Human protein_coding chr12:14975978 chr12:14975979 nonsynonymous SNV 0.157 1 22 hPsi_associated_SNPs_7426 0 0 0 0 0 exosome 0.438718595378861 0.438714322956374 0.15178728 0 hPsi_site_12843 iPseU_CNN:0.15178728;iRNA_PseU:0 12844 chr17 21319679 21319679 1 + A G LIHC 21319678 + 21319658 21319698 41 AGAACCAGTACAAGATTGACTACTCGCACTTCCACAAGACC AGAACCAGTACAAGATTGACTGCTCGCACTTCCACAAGACC < 41bp 0.911000644732162 0.610874096417354 0.26402235 0.17949912 prediction 0.600253096629616 Functional Loss - KCNJ12;KCNJ18 ENSG00000184185 CDS Human protein_coding chr17:21319678 chr17:21319679 nonsynonymous SNV 0.966 5 22 hPsi_associated_SNPs_7427 0 0 1 0 0 unknown 0.43871703394655 0.438696854100181 0 0 hPsi_site_12844 iPseU_CNN:0;iRNA_PseU:0 12845 chr1 248202321 248202321 1 + A C LUAD 248202320 + 248202300 248202340 41 TCACTGTAGTGTCCTTCTACTATGCACCCTTTGCTTATACC TCACTGTAGTGTCCTTCTACTCTGCACCCTTTGCTTATACC < 41bp 0.800121990367598 0.453262146510721 0.34001678 0.23867002 prediction 0.600243980735196 Functional Loss - OR2L2 ENSG00000203663 CDS Human protein_coding chr1:248202320 chr1:248202321 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_7428 0 0 0 0 0 exosome 0.438718328162228 0.438718737473211 0 0 hPsi_site_12845 iPseU_CNN:0;iRNA_PseU:0 12846 chrX 48558930 48558930 1 + A G LUSC 48558929 + 48558909 48558949 41 CGTCACTGCACAAGTTTGCCTACAATGACCAGGGCCAGGTG CGTCACTGCACAAGTTTGCCTGCAATGACCAGGGCCAGGTG < 41bp 0.800101876001246 0.36796523292573 0.6119874 0.421686 prediction 0.600203752002493 Functional Loss - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48558929 chrX:48558930 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_7429 0 0 1 0 0 Ribosome 0.438439127854067 0.438658471605502 0.2239748 0 hPsi_site_12846 iPseU_CNN:0.2239748;iRNA_PseU:0 12847 chr7 141463917 141463917 1 + A G rs112055319 141463916 + 141463896 141463936 41 ATCAGTGAGGAGATTCTATGTATCAACAGAAAGAACAAAGA ATCAGTGAGGAGATTCTATGTGTCAACAGAAAGAACAAAGA < 41bp 0.800080252102536 0.453830654333374 0.21759954 0.20568097 prediction 0.600160504205071 Functional Loss - TAS2R3 ENSG00000127362 UTR5 Human protein_coding chr7:141463916 chr7:141463917 . . 0 22 hPsi_associated_SNPs_7430 0 0 1 0 0 exosome 0.438847798719587 0.439087823436304 0 0 hPsi_site_12847 iPseU_CNN:0;iRNA_PseU:0 12848 chrX 102586581 102586581 1 + A G UCEC 102586580 + 102586560 102586600 41 AGGGGTCTGAGAAAGAAATTTAGGGCTCTGCATTCTAACCA AGGGGTCTGAGAAAGAAATTTGGGGCTCTGCATTCTAACCA < 41bp 0.904919411049581 0.604840704382389 0.61701536 0.39985836 prediction 0.600157413334385 Functional Loss - TCEAL7 ENSG00000182916 CDS Human protein_coding chrX:102586580 chrX:102586581 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_7431 0 0 0 0 0 exosome 0.438718593123749 0.438718592997184 0.23403072 0 hPsi_site_12848 iPseU_CNN:0.23403072;iRNA_PseU:0 12849 chr1 44054595 44054595 1 + A G UCEC 44054594 + 44054574 44054614 41 CCTGGAGCTCAGCAATGTCGTACGCTCTGCCAACTACACCT CCTGGAGCTCAGCAATGTCGTGCGCTCTGCCAACTACACCT < 41bp 0.800077424329195 0.380144541732046 0.703309 0.2389259 prediction 0.600154848658389 Functional Loss - PTPRF ENSG00000142949 CDS Human protein_coding chr1:44054594 chr1:44054595 synonymous SNV . 0 22 hPsi_associated_SNPs_7432 0 0 0 0 1 Ribosome 0.438963107504297 0.439608371736984 0.406618 0 hPsi_site_12849 iPseU_CNN:0.406618;iRNA_PseU:0 12850 chr5 167922429 167922429 1 + A G LUAD 167922428 + 167922408 167922448 41 GCCTCTTTGAATTTGCAGGGTATGACGTGCTCAGGTATGTG GCCTCTTTGAATTTGCAGGGTGTGACGTGCTCAGGTATGTG < 41bp 0.800056027237237 0.374688586177009 0.4098803 0.21777627 prediction 0.600112054474474 Functional Loss - RARS ENSG00000113643 CDS Human protein_coding chr5:167922428 chr5:167922429 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_7433 0 0 1 0 1 Nucleus 0.437828640773477 0.438715184306804 0 0 hPsi_site_12850 iPseU_CNN:0;iRNA_PseU:0 12851 chr16 88806399 88806399 1 + A G rs570735536 88806398 + 88806378 88806418 41 GGCCCGGCCCTGACTTGGGGTATGAGGCCACCGAGGGGCAG GGCCCGGCCCTGACTTGGGGTGTGAGGCCACCGAGGGGCAG < 41bp 0.800048033139603 0.424081549753236 0.56229234 0.2960151 prediction 0.600096066279205 Functional Loss - LOC100289580 ENSG00000224888 ncRNA_exonic Human antisense chr16:88806398 chr16:88806399 . . 0 22 hPsi_associated_SNPs_7434 0 0 0 0 0 unknown 0.43871859299569 0.438718592996859 0.12458468 0 hPsi_site_12851 iPseU_CNN:0.12458468;iRNA_PseU:0 12852 chr3 12610416 12610416 1 + A C rs35388688 12610415 + 12610395 12610435 41 TCGGGAAGGAAGTCAGTGCCTATTCTCACATGACTTGGCAA TCGGGAAGGAAGTCAGTGCCTCTTCTCACATGACTTGGCAA < 41bp 0.800037717888078 0.421683768076787 0.5737085 0.28942847 prediction 0.600075435776156 Functional Loss - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12610415 chr3:12610416 synonymous SNV . 0 22 hPsi_associated_SNPs_7435 0 0 1 0 1 Cytosol 0.438718523518333 0.438519059281786 0.147417 0 hPsi_site_12852 iPseU_CNN:0.147417;iRNA_PseU:0 12853 chr17 9578252 9578252 1 + T C UCEC 9578251 + 9578231 9578271 41 GCCTGAAACAGAGCAACACCTTTGATCCTTTCCTGTGTGTG GCCTGAAACAGAGCAACACCTCTGATCCTTTCCTGTGTGTG < 41bp 0.800018340954322 0.495218933119299 0.2990514 0.18555954 prediction 0.600036681908645 Functional Loss - USP43 ENSG00000154914 CDS Human protein_coding chr17:9578251 chr17:9578252 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_7436 0 0 0 0 2 cytosol 0.438695978838006 0.438717330271693 0 0 hPsi_site_12853 iPseU_CNN:0;iRNA_PseU:0 12854 chr3 58134031 58134031 1 + A G LUSC 58134030 + 58134010 58134050 41 AGCAGCCTGACGGCCAGCATTAAGGCCCCATCTGGCCGAGA AGCAGCCTGACGGCCAGCATTGAGGCCCCATCTGGCCGAGA < 41bp 0.800014142248716 0.376264150525929 0.69706196 0.25403857 prediction 0.600028284497433 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58134030 chr3:58134031 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_7437 0 0 1 0 2 Cytosol 0.438718591387635 0.438718592974209 0.39412392 0 hPsi_site_12854 iPseU_CNN:0.39412392;iRNA_PseU:0 12855 chr7 107115470 107115470 1 + T G GBM 107115469 + 107115449 107115489 41 CTTTATTGATTATTTCTACATTTCTTCTCTGCTGGACACCA CTTTATTGATTATTTCTACATGTCTTCTCTGCTGGACACCA < 41bp 0.800004449617462 0.486341981980859 0.22942853 0.19502121 prediction 0.600008899234924 Functional Loss - GPR22 ENSG00000172209 CDS Human protein_coding chr7:107115469 chr7:107115470 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_7438 0 0 0 0 0 nucleus 0.438718297162033 0.438518224885461 0 0 hPsi_site_12855 iPseU_CNN:0;iRNA_PseU:0 12856 chr10 45480359 45480359 1 + G A HNSC 45480358 + 45480338 45480378 41 CCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCG CCCAAGTGCCGCGCCCCCGGTAAGGCCCAGCGCATCCGGCG < 41bp 0.498653453401962 0.879358661711943 0.6086894 0.90939665 prediction 0.758717323423886 Functional Gain - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45480358 chr10:45480359 nonsynonymous SNV 0.560 3 22 hPsi_associated_SNPs_19132 0 0 1 0 2 Cytosol 0.438716994891883 0.438718621142327 0.6014145 0 hPsi_site_12856 iPseU_CNN:0.6014145;iRNA_PseU:0 12857 chr18 670747 670747 1 + G A BLCA 670746 + 670726 670766 41 CCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGTCCTGCC CCTCTGCCAGTTCTATGTGGTAAACAGTGAGCTGTCCTGCC < 41bp 0.504736307945827 0.882783565998895 0.34272808 0.63553774 prediction 0.756094516106136 Functional Gain - TYMS ENSG00000176890 CDS Human protein_coding chr18:670746 chr18:670747 synonymous SNV . 0 22 hPsi_associated_SNPs_19133 0 0 1 0 1 Ribosome 0.438718592979024 0.43871858679856 0.27107548 0 hPsi_site_12857 iPseU_CNN:0.27107548;iRNA_PseU:0 12858 chr7 150707312 150707312 1 + G A rs34967063 150707311 + 150707291 150707331 41 CCCACCCAGCCCTCAGCTCTTGCGGCTGCTCAGCACCTTGG CCCACCCAGCCCTCAGCTCTTACGGCTGCTCAGCACCTTGG < 41bp 0.501260556942869 0.879138331997262 0.25701618 0.33857012 prediction 0.755755550108786 Functional Gain - NOS3 ENSG00000164867 CDS Human protein_coding chr7:150707311 chr7:150707312 synonymous SNV . 0 22 hPsi_associated_SNPs_19134 0 0 1 0 1 chromatin 0.438718592995524 0.438718601199641 0 0 hPsi_site_12858 iPseU_CNN:0;iRNA_PseU:0 12859 chr17 56326485 56326485 1 + G A BLCA 56326484 + 56326464 56326504 41 TGGTGCTCCTGCTCCCGTGGTGAGATGCGACCCGTGCAGCC TGGTGCTCCTGCTCCCGTGGTAAGATGCGACCCGTGCAGCC < 41bp 0.493969329892882 0.877562062551682 0.435332 0.7975873 prediction 0.755124125103363 Functional Gain - LPO ENSG00000167419 CDS Human protein_coding chr17:56326484 chr17:56326485 synonymous SNV . 0 22 hPsi_associated_SNPs_19135 0 0 0 0 1 cytosol 0.438721147295928 0.438688115792706 0.5951746 0 hPsi_site_12859 iPseU_CNN:0.5951746;iRNA_PseU:0 12860 chr20 57273808 57273808 1 + G A BLCA 57273807 + 57273787 57273827 41 GGACACACCCTGCAATGAGATGAACACCGACACCTTCCTCG GGACACACCCTGCAATGAGATAAACACCGACACCTTCCTCG < 41bp 0.49960719099692 0.877326188247597 0.35521954 0.76908684 prediction 0.754652376495193 Functional Gain - NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57273807 chr20:57273808 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19136 0 0 1 0 2 cytosol 0.438581829775877 0.440480938358247 0.53817368 0 hPsi_site_12860 iPseU_CNN:0.53817368;iRNA_PseU:0 12861 chr3 9839370 9839370 1 + G A LAML 9839369 + 9839349 9839389 41 ACTCTCCGCCCCTACCTGAGTGCCGTGCGGGCCACATTGCA ACTCTCCGCCCCTACCTGAGTACCGTGCGGGCCACATTGCA < 41bp 0.501383429784985 0.878643708181326 0.26165634 0.5111286 prediction 0.754520556792683 Functional Gain - ARPC4;ARPC4-TTLL3 ENSG00000241553;ENSG00000250151 CDS Human other chr3:9839369 chr3:9839370 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19137 0 0 1 0 2 unknown 0.438718592874532 0.438718456904402 0.0222572000000001 0 hPsi_site_12861 iPseU_CNN:0.0222572000000001;iRNA_PseU:0 12862 chr16 84203767 84203767 1 + G A LUSC 84203766 + 84203746 84203786 41 CCAGAGGGGACCCTCCCAGCTGAGGCCCCACCACCCCCGCC CCAGAGGGGACCCTCCCAGCTAAGGCCCCACCACCCCCGCC < 41bp 0.500743291937113 0.877895560696242 0.24047104 0.30853128 prediction 0.754304537518258 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84203766 chr16:84203767 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19138 0 0 0 0 0 Cytosol 0.438718585134226 0.438718593377793 0 0 hPsi_site_12862 iPseU_CNN:0;iRNA_PseU:0 12863 chr16 84494279 84494279 1 + G A BLCA 84494278 + 84494258 84494298 41 AGCTTGGGGGTAGAGCCCGTTGACAAAGACGCCTTCAGGCA AGCTTGGGGGTAGAGCCCGTTAACAAAGACGCCTTCAGGCA < 41bp 0.497604322765133 0.87691188070039 0.59207106 0.84338164 prediction 0.753823761400779 Functional Gain - ATP2C2 ENSG00000064270 CDS Human protein_coding chr16:84494278 chr16:84494279 nonsynonymous SNV 0.040 5 22 hPsi_associated_SNPs_19139 0 0 0 0 1 Ribosome 0.438718592967763 0.438718592995272 0.50262116 0 hPsi_site_12863 iPseU_CNN:0.50262116;iRNA_PseU:0 12864 chr15 72954652 72954652 1 + G A CHOL 72954651 + 72954631 72954671 41 GTGGTGGAACAGCTACAAGATGAGGCCAAACACCTGAGGCA GTGGTGGAACAGCTACAAGATAAGGCCAAACACCTGAGGCA < 41bp 0.495970172286121 0.876774728897441 0.3288986 0.68339825 prediction 0.753549457794881 Functional Gain - GOLGA6B ENSG00000215186 CDS Human protein_coding chr15:72954651 chr15:72954652 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_19140 0 0 0 0 1 exosome 0.438715353123295 0.438718651940594 0.3667965 0 hPsi_site_12864 iPseU_CNN:0.3667965;iRNA_PseU:0 12865 chr12 7302216 7302216 1 + G A rs759941642 7302215 + 7302195 7302235 41 GGATCCCGAGCGGGAAAGCCTGCTCCTGGACACAACCTCTC GGATCCCGAGCGGGAAAGCCTACTCCTGGACACAACCTCTC < 41bp 0.494546026005392 0.87673606912036 0.3210072 0.627934 prediction 0.753472138240719 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7302215 chr12:7302216 synonymous SNV . 0 22 hPsi_associated_SNPs_19141 0 0 1 0 2 Endoplasmic reticulum 0.438718593047566 0.438718840004155 0.255868 0 hPsi_site_12865 iPseU_CNN:0.255868;iRNA_PseU:0 12866 chr5 150050098 150050098 1 + G A SKCM 150050097 + 150050077 150050117 41 CGTGCCCCAGGACCTGATGATGGAGGAGCTGTCACTACGCA CGTGCCCCAGGACCTGATGATAGAGGAGCTGTCACTACGCA < 41bp 0.498011078592143 0.876734542038341 0.2071068 0.44904116 prediction 0.753469084076683 Functional Gain - MYOZ3 ENSG00000164591 CDS Human protein_coding chr5:150050097 chr5:150050098 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_19142 0 0 0 0 1 exosome 0.438715986292073 0.438718590851798 0 0 hPsi_site_12866 iPseU_CNN:0;iRNA_PseU:0 12867 chr9 131670802 131670802 1 + G A SKCM 131670801 + 131670781 131670821 41 GGAGCTGGAGGTCCTCAAGCTGGAGCTGATCCCCGACGTGA GGAGCTGGAGGTCCTCAAGCTAGAGCTGATCCCCGACGTGA < 41bp 0.500478174819037 0.87650842709488 0.22879714 0.44752505 prediction 0.752060504551684 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131670801 chr9:131670802 synonymous SNV . 0 22 hPsi_associated_SNPs_19143 0 0 1 0 0 Endoplasmic reticulum 0.43873326942547 0.438718597626403 0 0 hPsi_site_12867 iPseU_CNN:0;iRNA_PseU:0 12868 chr16 70506958 70506958 1 + G A UCEC 70506957 + 70506937 70506977 41 CAGCGCCCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGC CAGCGCCCGCCTCTTTCCTGTACTCCACCCCTCGAGGGAGC < 41bp 0.503792620476222 0.879678425569802 0.33738926 0.79719293 prediction 0.75177161018716 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70506957 chr16:70506958 synonymous SNV . 0 22 hPsi_associated_SNPs_19144 0 0 0 0 1 chromatin 0.43871899997294 0.438729923856573 0.59438586 0 hPsi_site_12868 iPseU_CNN:0.59438586;iRNA_PseU:0 12869 chr12 53499750 53499750 1 + G A rs142498453 53499749 + 53499729 53499769 41 ACATGTTCATCGCTGGCCTGTGTGTCTTCATCATCAGCACC ACATGTTCATCGCTGGCCTGTATGTCTTCATCATCAGCACC < 41bp 0.5006090493732 0.876435890572437 0.34770635 0.6731118 prediction 0.751653682398474 Functional Gain - SOAT2 ENSG00000167780 CDS Human protein_coding chr12:53499749 chr12:53499750 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_19145 0 0 1 1 2 cytosol 0.438728743586702 0.438719847574834 0.3462236 0 hPsi_site_12869 iPseU_CNN:0.3462236;iRNA_PseU:0 12870 chr20 39802893 39802893 1 + G A BLCA 39802892 + 39802872 39802912 41 TCCCGCTACCAGCAGCCGTTTGAGGACTTCCGCATCTCCCA TCCCGCTACCAGCAGCCGTTTAAGGACTTCCGCATCTCCCA < 41bp 0.500580485369503 0.876384263370006 0.48755282 0.7596482 prediction 0.751607556001006 Functional Gain - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39802892 chr20:39802893 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19146 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592995102 0.5192964 0 hPsi_site_12870 iPseU_CNN:0.5192964;iRNA_PseU:0 12871 chr12 6838451 6838451 1 + G A OV 6838450 + 6838430 6838470 41 GTTGCTGGAGGCTCTTGCCCTGCGTAATGTGCGGCAGCTGG GTTGCTGGAGGCTCTTGCCCTACGTAATGTGCGGCAGCTGG < 41bp 0.498384217967891 0.875606986529775 0.37173015 0.5796458 prediction 0.75121397305955 Functional Gain - COPS7A ENSG00000111652 CDS Human protein_coding chr12:6838450 chr12:6838451 synonymous SNV . 0 22 hPsi_associated_SNPs_19147 0 0 1 1 0 Cytosol 0.438718592910867 0.438718524602563 0.1592916 0 hPsi_site_12871 iPseU_CNN:0.1592916;iRNA_PseU:0 12872 chr11 45891983 45891983 1 + G A GBM 45891982 + 45891962 45892002 41 AGCCAAGTGCATCATTGGTGTGGACTACCCACGGCCCATCG AGCCAAGTGCATCATTGGTGTAGACTACCCACGGCCCATCG < 41bp 0.504131989044359 0.879688065723728 0.33810937 0.6374673 prediction 0.751112153358739 Functional Gain - CRY2 ENSG00000121671 CDS Human protein_coding chr11:45891982 chr11:45891983 synonymous SNV . 0 22 hPsi_associated_SNPs_19148 0 0 1 0 0 Nucleus 0.438718741666352 0.438718607882167 0.2749346 0 hPsi_site_12872 iPseU_CNN:0.2749346;iRNA_PseU:0 12873 chr17 61662609 61662609 1 + G A UCEC 61662608 + 61662588 61662628 41 GTCCGGGTTCCCTGCACACCTGTCGCCAGGTTAAACAACCA GTCCGGGTTCCCTGCACACCTATCGCCAGGTTAAACAACCA < 41bp 0.499887637632895 0.87544771968121 0.21775094 0.33308578 prediction 0.750895439362421 Functional Gain - DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61662608 chr17:61662609 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_19149 0 0 1 1 2 Cytosol 0.438718784668913 0.438718585085266 0 0 hPsi_site_12873 iPseU_CNN:0;iRNA_PseU:0 12874 chr20 32354772 32354772 1 + G A LUAD 32354771 + 32354751 32354791 41 CCTCATCGACAGCTCCTACCTGTGCCAATTCTGCCCCAGCA CCTCATCGACAGCTCCTACCTATGCCAATTCTGCCCCAGCA < 41bp 0.495194353144512 0.87544483942231 0.28792563 0.37661368 prediction 0.750889678844619 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32354771 chr20:32354772 synonymous SNV . 0 22 hPsi_associated_SNPs_19150 0 0 0 2 1 chromatin 0.43871914442863 0.438718465611273 0 0 hPsi_site_12874 iPseU_CNN:0;iRNA_PseU:0 12875 chr13 111287078 111287078 1 + G A UCEC 111287077 + 111287057 111287097 41 CCATGGCTACCGGAAGGCTGTGCTCACTCCCAACCACGTGG CCATGGCTACCGGAAGGCTGTACTCACTCCCAACCACGTGG < 41bp 0.499151083728542 0.875256079395004 0.390508 0.809597 prediction 0.750512158790007 Functional Gain - NAXD ENSG00000213995 CDS Human protein_coding chr13:111287077 chr13:111287078 synonymous SNV . 0 22 hPsi_associated_SNPs_19151 0 0 1 0 2 Cytosol 0.438718843689982 0.438736297732663 0.619194 0 hPsi_site_12875 iPseU_CNN:0.619194;iRNA_PseU:0 Adolescent idiopathic scoliosis 12876 chr7 6634089 6634089 1 + G A BLCA 6634088 + 6634068 6634108 41 GACGCCCGTGGTTTACTGTGTGAGGTTAGCCAAGGCCCTTG GACGCCCGTGGTTTACTGTGTAAGGTTAGCCAAGGCCCTTG < 41bp 0.501958753240521 0.877168523620472 0.28262383 0.50398916 prediction 0.750419540759903 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634088 chr7:6634089 synonymous SNV . 0 22 hPsi_associated_SNPs_19152 0 0 1 0 1 chromatin 0.438718593567022 0.438718592995935 0.00797832000000009 0 hPsi_site_12876 iPseU_CNN:0.00797832000000009;iRNA_PseU:0 12877 chr21 38098537 38098537 1 + G A STAD 38098536 + 38098516 38098556 41 GGCCAGTCGCTGCCACCCAGTGCCATCACCGAGATCAAGCT GGCCAGTCGCTGCCACCCAGTACCATCACCGAGATCAAGCT < 41bp 0.48877749320025 0.875187024802518 0.35071486 0.8528795 prediction 0.750374049605035 Functional Gain - SIM2 ENSG00000159263 CDS Human protein_coding chr21:38098536 chr21:38098537 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_19153 0 0 1 0 1 nucleus 0.438720295963885 0.43876790224281 0.705759 0 hPsi_site_12877 iPseU_CNN:0.705759;iRNA_PseU:0 12878 chr11 57369571 57369571 1 + G A SARC 57369570 + 57369550 57369590 41 CTTACCCCAAGGACTTCACCTGTGTCCACCAGGCCCTGAAG CTTACCCCAAGGACTTCACCTATGTCCACCAGGCCCTGAAG < 41bp 0.50037232286662 0.875453074260533 0.17147565 0.21872216 prediction 0.750161502787825 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57369570 chr11:57369571 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_19154 0 0 1 0 2 Endoplasmic reticulum 0.438718592995116 0.438718592995106 0 0 hPsi_site_12878 iPseU_CNN:0;iRNA_PseU:0 12879 chr10 45878011 45878011 1 + G A CESC 45878010 + 45877990 45878030 41 CGAGAAGCGCAAGTACTGGCTGAATGACGACTGGTACCTGA CGAGAAGCGCAAGTACTGGCTAAATGACGACTGGTACCTGA < 41bp 0.503073971482011 0.878034666120681 0.23280814 0.345681 prediction 0.74992138927734 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45878010 chr10:45878011 synonymous SNV . 0 22 hPsi_associated_SNPs_19155 0 0 0 0 1 Cytosol 0.43755885703001 0.438609266105914 0 0 hPsi_site_12879 iPseU_CNN:0;iRNA_PseU:0 12880 chr11 66262701 66262701 1 + G A BLCA 66262700 + 66262680 66262720 41 GAAAAAGGAGCATTCAACTTTGACCAGGAAACAGTGATCAA GAAAAAGGAGCATTCAACTTTAACCAGGAAACAGTGATCAA < 41bp 0.49266589156832 0.874857492379843 0.21816555 0.28774947 prediction 0.749714984759686 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262700 chr11:66262701 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19156 0 0 1 0 2 Nucleus 0.438718590048912 0.438718402874171 0 0 hPsi_site_12880 iPseU_CNN:0;iRNA_PseU:0 12881 chr1 160054063 160054063 1 + G A BLCA 160054062 + 160054042 160054082 41 CTTCGGCGCCATCTGGTGGCTGATCGCCTACGGCCGCGGCG CTTCGGCGCCATCTGGTGGCTAATCGCCTACGGCCGCGGCG < 41bp 0.500108114292493 0.874894889804857 0.5063351 0.86399233 prediction 0.749573551024729 Functional Gain - KCNJ9 ENSG00000162728 CDS Human protein_coding chr1:160054062 chr1:160054063 synonymous SNV . 0 22 hPsi_associated_SNPs_19157 0 0 0 0 0 nucleus 0.438367985418538 0.438718723488388 0.71531446 0 hPsi_site_12881 iPseU_CNN:0.71531446;iRNA_PseU:0 12882 chr17 6929875 6929875 1 + G A LGG 6929874 + 6929854 6929894 41 ACGAAGACAAACCCTATAAGTGTCAGCTGTGCCGGTCTTCG ACGAAGACAAACCCTATAAGTATCAGCTGTGCCGGTCTTCG < 41bp 0.496296549144094 0.874709927813067 0.31306243 0.5306847 prediction 0.749419855626135 Functional Gain - BCL6B ENSG00000161940 CDS Human protein_coding chr17:6929874 chr17:6929875 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_19158 0 0 0 0 2 Endoplasmic reticulum 0.438718591354283 0.438718593040625 0.0613694 0 hPsi_site_12882 iPseU_CNN:0.0613694;iRNA_PseU:0 12883 chr11 119050740 119050740 1 + G A STAD 119050739 + 119050719 119050759 41 CAAGCTGGGCCGGCAGGTGCTGCCCCCATCAGAGCTCCTTG CAAGCTGGGCCGGCAGGTGCTACCCCCATCAGAGCTCCTTG < 41bp 0.497937737738204 0.874654488920647 0.25958577 0.581221 prediction 0.749308977841295 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119050739 chr11:119050740 synonymous SNV . 0 22 hPsi_associated_SNPs_19159 0 0 1 0 0 exosome 0.441128114301616 0.473768622986651 0.162442 0 hPsi_site_12883 iPseU_CNN:0.162442;iRNA_PseU:0 12884 chr14 95056451 95056451 1 + G A rs147867587 95056450 + 95056430 95056470 41 CGTGACCTCGGAGACTGTGGTGCGGGTACCCATGATGAGCC CGTGACCTCGGAGACTGTGGTACGGGTACCCATGATGAGCC < 41bp 0.496284215828331 0.874642265386674 0.26369756 0.8253228 prediction 0.749284530773348 Functional Gain - SERPINA5 ENSG00000188488 CDS Human protein_coding chr14:95056450 chr14:95056451 synonymous SNV . 0 22 hPsi_associated_SNPs_19160 0 0 1 0 1 cytosol 0.438954704923155 0.439275064058882 0.6506456 0 hPsi_site_12884 iPseU_CNN:0.6506456;iRNA_PseU:0 12885 chr7 99702518 99702518 1 + G A SKCM 99702517 + 99702497 99702537 41 GGATCCCTGCTGAAGGTGGATGTGCAGGGAGAGATTCGGCT GGATCCCTGCTGAAGGTGGATATGCAGGGAGAGATTCGGCT < 41bp 0.49772373072358 0.874624267321623 0.21109927 0.27786085 prediction 0.749248534643246 Functional Gain - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702517 chr7:99702518 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_19161 0 0 1 0 2 Cytosol 0.438716832627031 0.438658158635338 0 0 hPsi_site_12885 iPseU_CNN:0;iRNA_PseU:0 12886 chr8 145066078 145066078 1 + G A UCEC 145066077 + 145066057 145066097 41 GCTGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTG GCTGACCTTGCAGCTGTCGGTAACCCTGTCCACGGTGTCTG < 41bp 0.496853372246338 0.874597551382666 0.33277673 0.5049892 prediction 0.749195102765332 Functional Gain - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066077 chr8:145066078 synonymous SNV . 0 22 hPsi_associated_SNPs_19162 0 0 1 0 1 Endoplasmic reticulum 0.438716545625794 0.438718888971415 0.00997840000000005 0 hPsi_site_12886 iPseU_CNN:0.00997840000000005;iRNA_PseU:0 12887 chr12 7287953 7287953 1 + G A OV 7287952 + 7287932 7287972 41 GCATGTGCGGGTCAACGATGTGAACGAGTTTGCCCCAGTGT GCATGTGCGGGTCAACGATGTAAACGAGTTTGCCCCAGTGT < 41bp 0.505050540670347 0.879642765386824 0.39573276 0.68081963 prediction 0.749184449432954 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7287952 chr12:7287953 synonymous SNV . 0 22 hPsi_associated_SNPs_19163 0 0 1 0 1 Endoplasmic reticulum 0.439141803871602 0.416102669631222 0.36163926 0 hPsi_site_12887 iPseU_CNN:0.36163926;iRNA_PseU:0 12888 chr20 60854354 60854354 1 + G A SKCM 60854353 + 60854333 60854373 41 CAAGTTCTGGGGCAAAAGCGTGGAGGCGGAGCCCCGAGGCA CAAGTTCTGGGGCAAAAGCGTAGAGGCGGAGCCCCGAGGCA < 41bp 0.505006704052538 0.87958765572412 0.55564827 0.78530973 prediction 0.749161903343163 Functional Gain - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60854353 chr20:60854354 synonymous SNV . 0 22 hPsi_associated_SNPs_19164 0 0 1 0 2 Ribosome 0.438718592995044 0.438716781082089 0.45932292 0 hPsi_site_12888 iPseU_CNN:0.45932292;iRNA_PseU:0 12889 chr19 39214899 39214899 1 + G A BLCA 39214898 + 39214878 39214918 41 AAGGAGGCCCAGAGGATCGCTGAGAGCAACCACATCAAGCT AAGGAGGCCCAGAGGATCGCTAAGAGCAACCACATCAAGCT < 41bp 0.502956538316781 0.877520340969648 0.23776278 0.66739756 prediction 0.749127605305733 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39214898 chr19:39214899 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_19165 0 0 1 0 1 Nucleus 0.438717927112664 0.438717066477909 0.33479512 0 hPsi_site_12889 iPseU_CNN:0.33479512;iRNA_PseU:0 12890 chr19 45375390 45375390 1 + G A BLCA 45375389 + 45375369 45375409 41 GGAACCAGCCCTGATACCTGTGACCCTCTCTGTACGCTGTG GGAACCAGCCCTGATACCTGTAACCCTCTCTGTACGCTGTG < 41bp 0.497927624073403 0.87449043140892 0.21143365 0.71988165 prediction 0.74898086281784 Functional Gain - NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375389 chr19:45375390 synonymous SNV . 0 22 hPsi_associated_SNPs_19166 0 0 0 0 1 Ribosome 0.438718592994504 0.438718592995211 0.4397633 0 hPsi_site_12890 iPseU_CNN:0.4397633;iRNA_PseU:0 12891 chr14 24545597 24545597 1 + G A SKCM 24545596 + 24545576 24545616 41 CGGTTCCCAGCTTTTGGCTTTGGGGCTCGAATCCCCCCCAA CGGTTCCCAGCTTTTGGCTTTAGGGCTCGAATCCCCCCCAA < 41bp 0.49534244399087 0.874385399915829 0.34686023 0.7319478 prediction 0.748770799831659 Functional Gain - CPNE6 ENSG00000100884 CDS Human protein_coding chr14:24545596 chr14:24545597 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_19167 0 0 0 0 2 exosome 0.438718592995154 0.438718593213645 0.4638956 0 hPsi_site_12891 iPseU_CNN:0.4638956;iRNA_PseU:0 12892 chrX 152813327 152813327 1 + G A UCEC 152813326 + 152813306 152813346 41 TGGTGCAGTGGCCATGGAGATGCAGCCCCTGAAGAGCGCGG TGGTGCAGTGGCCATGGAGATACAGCCCCTGAAGAGCGCGG < 41bp 0.500602974242501 0.874975121040294 0.5039317 0.53073573 prediction 0.748744293595585 Functional Gain - ATP2B3 ENSG00000067842 CDS Human protein_coding chrX:152813326 chrX:152813327 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19168 0 0 0 0 1 exosome 0.438727000545987 0.438895437387221 0.05360806 0 hPsi_site_12892 iPseU_CNN:0.05360806;iRNA_PseU:0 12893 chr19 56370032 56370032 1 + G A UCEC 56370031 + 56370011 56370051 41 GACCTCCGGAGAAATGGGGTTGTTGACGCTGACATCCCTGC GACCTCCGGAGAAATGGGGTTATTGACGCTGACATCCCTGC < 41bp 0.497117194076758 0.874332192572698 0.38554484 0.613787 prediction 0.748664385145396 Functional Gain - NLRP4 ENSG00000160505 CDS Human protein_coding chr19:56370031 chr19:56370032 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_19169 0 0 0 0 0 exosome 0.43871791200698 0.438718600064252 0.227574 0 hPsi_site_12893 iPseU_CNN:0.227574;iRNA_PseU:0 12894 chr1 205039111 205039111 1 + G A HNSC 205039110 + 205039090 205039130 41 GTCCGGCCCTACACGCCCTTTGAGGTCAAGATCCGCAGCTA GTCCGGCCCTACACGCCCTTTAAGGTCAAGATCCGCAGCTA < 41bp 0.499166869376273 0.874271383347307 0.34475935 0.6801498 prediction 0.748542766694614 Functional Gain - CNTN2 ENSG00000184144 CDS Human protein_coding chr1:205039110 chr1:205039111 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_19170 0 0 0 0 1 exosome 0.439610015769066 0.438753515656399 0.3602996 0 hPsi_site_12894 iPseU_CNN:0.3602996;iRNA_PseU:0 12895 chr20 42199320 42199320 1 + G A BLCA 42199319 + 42199299 42199339 41 CGGGCCAGGTTCTACGCTGCTGAGGTGGCCAGCGCCATTGG CGGGCCAGGTTCTACGCTGCTAAGGTGGCCAGCGCCATTGG < 41bp 0.494781336129994 0.874219620218775 0.31740454 0.42921245 prediction 0.748439240437551 Functional Gain - SGK2 ENSG00000101049 CDS Human protein_coding chr20:42199319 chr20:42199320 nonsynonymous SNV 0.944 4 22 hPsi_associated_SNPs_19171 0 0 0 2 2 Endoplasmic reticulum 0.43871860359786 0.438772246246227 0 0 hPsi_site_12895 iPseU_CNN:0;iRNA_PseU:0 Body mass index 12896 chr11 128680373 128680373 1 + G A OV 128680372 + 128680352 128680392 41 AGGAAGCGGGCAGATCCAGCTGTGGCAATTCCTCCTGGAGC AGGAAGCGGGCAGATCCAGCTATGGCAATTCCTCCTGGAGC < 41bp 0.499964691770284 0.874176039753396 0.3929746 0.33642805 prediction 0.748352079506792 Functional Gain - FLI1 ENSG00000151702 CDS Human protein_coding chr11:128680372 chr11:128680373 synonymous SNV . 0 22 hPsi_associated_SNPs_19172 0 0 0 0 1 Endoplasmic reticulum 0.438729785436987 0.439057704205762 0 0 hPsi_site_12896 iPseU_CNN:0;iRNA_PseU:0 12897 chr1 156351699 156351699 1 + G A rs3748569 156351698 + 156351678 156351718 41 CTGGCAGCTGGCTTCTTGGCTGGGACTGTCTCCACGCTGGG CTGGCAGCTGGCTTCTTGGCTAGGACTGTCTCCACGCTGGG < 41bp 0.496409362530191 0.87413725978574 0.30441067 0.73717475 prediction 0.74827451957148 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156351698 chr1:156351699 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19173 0 0 1 0 2 Cytosol 0.43732095771392 0.438920880966401 0.4743495 0 hPsi_site_12897 iPseU_CNN:0.4743495;iRNA_PseU:0 12898 chr7 98985831 98985831 1 + G A rs145592588 98985830 + 98985810 98985850 41 CAACGAGAACAAGTTTGCTGTGGGCAGCGGCTCTCGTGTGA CAACGAGAACAAGTTTGCTGTAGGCAGCGGCTCTCGTGTGA < 41bp 0.505175764257844 0.879274273565614 0.34651875 0.46465367 prediction 0.74819701861554 Functional Gain - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985830 chr7:98985831 synonymous SNV . 0 22 hPsi_associated_SNPs_19174 0 0 1 0 0 Cytosol 0.437434949241614 0.436554580117405 0 0 hPsi_site_12898 iPseU_CNN:0;iRNA_PseU:0 12899 chr16 89702385 89702385 1 + G A STAD 89702384 + 89702364 89702404 41 GCAGGACGAGAGGGCCAACCTGACCACCTTGGCCGGCACAC GCAGGACGAGAGGGCCAACCTAACCACCTTGGCCGGCACAC < 41bp 0.502008176415862 0.876064415464289 0.31230116 0.43382913 prediction 0.748112478096854 Functional Gain - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89702384 chr16:89702385 synonymous SNV . 0 22 hPsi_associated_SNPs_19175 0 0 0 0 2 Ribosome 0.438718621014885 0.438718544217613 0 0 hPsi_site_12899 iPseU_CNN:0;iRNA_PseU:0 12900 chr11 75438572 75438572 1 + G A STAD 75438571 + 75438551 75438591 41 AGTCGGAGCCTTTGCCAACCTGTGCACTGAGAGCACAGGCT AGTCGGAGCCTTTGCCAACCTATGCACTGAGAGCACAGGCT < 41bp 0.491674226434903 0.874025983332031 0.17452139 0.25672153 prediction 0.748051966664061 Functional Gain - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75438571 chr11:75438572 synonymous SNV . 0 22 hPsi_associated_SNPs_19176 0 0 1 0 1 exosome 0.438718592995103 0.438718592995102 0 0 hPsi_site_12900 iPseU_CNN:0;iRNA_PseU:0 12901 chr1 156756637 156756637 1 + G A STAD 156756636 + 156756616 156756656 41 ATCAAGGCTGCTGCCAAGAGTGCTGCCCTGCAGGTGACAAA ATCAAGGCTGCTGCCAAGAGTACTGCCCTGCAGGTGACAAA < 41bp 0.501889656382325 0.875893107686008 0.32662845 0.38839424 prediction 0.748006902607366 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156756636 chr1:156756637 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19177 0 0 1 0 0 Ribosome 0.438913509409411 0.439987142124218 0 0 hPsi_site_12901 iPseU_CNN:0;iRNA_PseU:0 12902 chr20 42252656 42252656 1 + G A STAD 42252655 + 42252635 42252675 41 CGACCTGTCCATCTTCCAGCTGGATACCACCTCCTTCCACA CGACCTGTCCATCTTCCAGCTAGATACCACCTCCTTCCACA < 41bp 0.505169986137041 0.879160410643107 0.24677926 0.34113088 prediction 0.747980849012132 Functional Gain - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42252655 chr20:42252656 synonymous SNV . 0 22 hPsi_associated_SNPs_19178 0 0 1 0 1 chromatin 0.438718589685342 0.438718585007802 0 0 hPsi_site_12902 iPseU_CNN:0;iRNA_PseU:0 12903 chr6 27222551 27222551 1 + G A UCEC 27222550 + 27222530 27222570 41 GCTAGACCTATGTGAGCAGGTGTTTGGGCTCTCAGCCTTGT GCTAGACCTATGTGAGCAGGTATTTGGGCTCTCAGCCTTGT < 41bp 0.500292193138239 0.874228971470645 0.3120815 0.7765914 prediction 0.747873556664811 Functional Gain - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27222550 chr6:27222551 synonymous SNV . 0 22 hPsi_associated_SNPs_19179 0 0 1 0 1 Cytosol 0.438737238659485 0.438718850373662 0.5531828 0 hPsi_site_12903 iPseU_CNN:0.5531828;iRNA_PseU:0 12904 chr16 50118086 50118086 1 + G A COAD 50118085 + 50118065 50118105 41 GAAGAGCTTTCTAGCAGTGATGAAAGTGACGCATTTATGGA GAAGAGCTTTCTAGCAGTGATAAAAGTGACGCATTTATGGA < 41bp 0.497531017067124 0.873806548418424 0.19385841 0.24607888 prediction 0.747613096836848 Functional Gain - HEATR3 ENSG00000155393 CDS Human protein_coding chr16:50118085 chr16:50118086 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_19180 0 0 1 0 1 Ribosome 0.435670772108907 0.43909257547513 0 0 hPsi_site_12904 iPseU_CNN:0;iRNA_PseU:0 12905 chr2 73447182 73447182 1 + G A OV 73447181 + 73447161 73447201 41 TCTGGCTCTCACCGTCAGCCTGTGACCACTGCCTTAGGGCA TCTGGCTCTCACCGTCAGCCTATGACCACTGCCTTAGGGCA < 41bp 0.500908491594479 0.874711603480124 0.31623495 0.5699003 prediction 0.74760622377129 Functional Gain - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73447181 chr2:73447182 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19181 0 0 1 0 1 Ribosome 0.437223314867292 0.438623781768172 0.1398006 0 hPsi_site_12905 iPseU_CNN:0.1398006;iRNA_PseU:0 12906 chr20 42252606 42252606 1 + G A BLCA 42252605 + 42252585 42252625 41 GAGTGTCTCCAGGAGAGTGATGAGATCCCAAGGGACTTTAC GAGTGTCTCCAGGAGAGTGATAAGATCCCAAGGGACTTTAC < 41bp 0.496616548209626 0.873698004824737 0.27493936 0.34039634 prediction 0.747396009649473 Functional Gain - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42252605 chr20:42252606 nonsynonymous SNV 0.914 3 22 hPsi_associated_SNPs_19182 0 0 1 0 2 chromatin 0.438716195928243 0.43871863365698 0 0 hPsi_site_12906 iPseU_CNN:0;iRNA_PseU:0 12907 chrX 49029509 49029509 1 + G A COAD 49029508 + 49029488 49029528 41 GTGATCCTGATCTGCTTCAGTGCCTCCACACCAGGCTACTC GTGATCCTGATCTGCTTCAGTACCTCCACACCAGGCTACTC < 41bp 0.500950486504361 0.874582982541921 0.28578877 0.7391234 prediction 0.747264992075122 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49029508 chrX:49029509 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_19183 0 0 1 0 1 Ribosome 0.438718599106517 0.43871815916949 0.4782468 0 hPsi_site_12907 iPseU_CNN:0.4782468;iRNA_PseU:0 12908 chr12 52369163 52369163 1 + G A STAD 52369162 + 52369142 52369182 41 TGGAGCACCATGTGCGCACCTGCATCCCCAAAGTGGAGCTG TGGAGCACCATGTGCGCACCTACATCCCCAAAGTGGAGCTG < 41bp 0.49055512705746 0.87356216212526 0.18732536 0.3277136 prediction 0.747124324250519 Functional Gain - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52369162 chr12:52369163 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_19184 0 0 0 0 0 Endoplasmic reticulum 0.438775697652718 0.438671330757605 0 0 hPsi_site_12908 iPseU_CNN:0;iRNA_PseU:0 12909 chr1 53544311 53544311 1 + G A STAD 53544310 + 53544290 53544330 41 GCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCCGCGTGCG GCGCTGGAGCGCGTGCCCAGTAGCCTGCCTCGCCGCGTGCG < 41bp 0.503900505773184 0.87746154200393 0.29690373 0.7099479 prediction 0.747122072461492 Functional Gain - PODN ENSG00000174348 CDS Human protein_coding chr1:53544310 chr1:53544311 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_19185 0 0 0 0 0 Cytosol 0.438715024511754 0.438788877088585 0.4198958 0 hPsi_site_12909 iPseU_CNN:0.4198958;iRNA_PseU:0 12910 chr5 180477308 180477308 1 + G A LUSC 180477307 + 180477287 180477327 41 AGCGGGAGCCCTCAGCAATGTGTCCGTCTCCATCCAGAATC AGCGGGAGCCCTCAGCAATGTATCCGTCTCCATCCAGAATC < 41bp 0.506261149266618 0.879761864198975 0.32768893 0.5725672 prediction 0.747001429864714 Functional Gain - BTNL9 ENSG00000165810 CDS Human protein_coding chr5:180477307 chr5:180477308 synonymous SNV . 0 22 hPsi_associated_SNPs_19186 0 0 0 0 1 Cytosol 0.438718367875131 0.438717542078401 0.1451344 0 hPsi_site_12910 iPseU_CNN:0.1451344;iRNA_PseU:0 12911 chr3 9759841 9759841 1 + G A SKCM 9759840 + 9759820 9759860 41 GATAAGCTCTTCCCAGCTTATGGCTTTGGGGCCAAGCTGCC GATAAGCTCTTCCCAGCTTATAGCTTTGGGGCCAAGCTGCC < 41bp 0.505438772549576 0.878917147981073 0.22364551 0.29114825 prediction 0.746956750862995 Functional Gain - CPNE9 ENSG00000144550 CDS Human protein_coding chr3:9759840 chr3:9759841 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_19187 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_12911 iPseU_CNN:0;iRNA_PseU:0 12912 chr10 71007183 71007183 1 + G A CESC 71007182 + 71007162 71007202 41 GGTCTGGAACCGTCTGAGGCTGACTGCATTGCCGTCCAGCA GGTCTGGAACCGTCTGAGGCTAACTGCATTGCCGTCCAGCA < 41bp 0.506016953722344 0.879472901273877 0.27314782 0.37041909 prediction 0.746911895103065 Functional Gain - HKDC1 ENSG00000156510 CDS Human protein_coding chr10:71007182 chr10:71007183 nonsynonymous SNV 0.833 5 22 hPsi_associated_SNPs_19188 0 0 0 0 1 Cytosol 0.440147506589627 0.43855140127409 0 0 hPsi_site_12912 iPseU_CNN:0;iRNA_PseU:0 12913 chr1 150460385 150460385 1 + G A BLCA 150460384 + 150460364 150460404 41 GCAGAGCGGCTTGGCCTTTTTGAGGAGCTGTGGGCTGCTCA GCAGAGCGGCTTGGCCTTTTTAAGGAGCTGTGGGCTGCTCA < 41bp 0.493322134024367 0.873442762647405 0.30768698 0.38224995 prediction 0.746885525294809 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150460384 chr1:150460385 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19189 0 0 1 0 1 Ribosome 0.438718592937795 0.43871859290011 0 0 hPsi_site_12913 iPseU_CNN:0;iRNA_PseU:0 12914 chr10 103368658 103368658 1 + G A CESC 103368657 + 103368637 103368677 41 ACCTCTGGATGACGCCTTGCTGAGCTTTGCCCACGCCAACT ACCTCTGGATGACGCCTTGCTAAGCTTTGCCCACGCCAACT < 41bp 0.495624338732175 0.873432123900099 0.22360015 0.45097587 prediction 0.746864247800199 Functional Gain - DPCD ENSG00000166171 CDS Human protein_coding chr10:103368657 chr10:103368658 synonymous SNV . 0 22 hPsi_associated_SNPs_19190 0 0 1 0 2 Ribosome 0.438718592956662 0.438718546424262 0 0 hPsi_site_12914 iPseU_CNN:0;iRNA_PseU:0 12915 chr16 72142436 72142436 1 + G A GBM 72142435 + 72142415 72142455 41 AGCGGATGAGCCTGGCCTCGTGTGGCACTGACTGGGACATC AGCGGATGAGCCTGGCCTCGTATGGCACTGACTGGGACATC < 41bp 0.506314639256543 0.879732019744251 0.30066463 0.47520244 prediction 0.746834760975415 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142435 chr16:72142436 nonsynonymous SNV 0.835 4 22 hPsi_associated_SNPs_19191 0 0 1 0 2 Cytosol 0.438907882806104 0.438876668975764 0 0 hPsi_site_12915 iPseU_CNN:0;iRNA_PseU:0 12916 chr3 38043241 38043241 1 + G A BRCA 38043240 + 38043220 38043260 41 GAGGCCCTGAACAGCAACGCTGAGGAACTAGATGTCATGTA GAGGCCCTGAACAGCAACGCTAAGGAACTAGATGTCATGTA < 41bp 0.488276732084469 0.873380246960837 0.24389717 0.2937612 prediction 0.746760493921675 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38043240 chr3:38043241 nonsynonymous SNV 0.030 0 22 hPsi_associated_SNPs_19192 0 0 0 0 1 chromatin 0.438728719715089 0.438718648964967 0 0 hPsi_site_12916 iPseU_CNN:0;iRNA_PseU:0 12917 chr2 27721143 27721143 1 + G A rs146175795 27721142 + 27721122 27721162 41 GAGCCAGATGGGGGGCTGGTTGTGCTGAGTGGAGGGGGCAC GAGCCAGATGGGGGGCTGGTTATGCTGAGTGGAGGGGGCAC < 41bp 0.49971050691763 0.87336610326853 0.29895073 0.39295784 prediction 0.74673220653706 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27721142 chr2:27721143 nonsynonymous SNV 0.754 5 22 hPsi_associated_SNPs_19193 1 0 1 0 2 cytosol 0.438714574975379 0.438718262201235 0 0 hPsi_site_12917 iPseU_CNN:0;iRNA_PseU:0 12918 chr4 1803385 1803385 1 + G A rs147769045 1803384 + 1803364 1803404 41 GAGCCTGGTCATGGAAAGCGTGGTGCCCTCGGACCGCGGCA GAGCCTGGTCATGGAAAGCGTAGTGCCCTCGGACCGCGGCA < 41bp 0.503361580228175 0.876640728308615 0.34449232 0.4490376 prediction 0.746558296160879 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1803384 chr4:1803385 synonymous SNV . 0 22 hPsi_associated_SNPs_19194 0 0 1 0 2 Ribosome 0.438718592986327 0.438718592969874 0 0 hPsi_site_12918 iPseU_CNN:0;iRNA_PseU:0 12919 chr11 71944710 71944710 1 + G A COAD 71944709 + 71944689 71944729 41 CTCTCCCCAGGTTGCACTGATGACATCGTCACCAGCGACCA CTCTCCCCAGGTTGCACTGATAACATCGTCACCAGCGACCA < 41bp 0.501179562110523 0.874439987930712 0.28455448 0.30722314 prediction 0.746520851640379 Functional Gain - INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71944709 chr11:71944710 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19195 0 0 1 0 2 Cytosol 0.43848873329575 0.438716452156858 0 0 hPsi_site_12919 iPseU_CNN:0;iRNA_PseU:0 12920 chr20 35827555 35827555 1 + G A OV 35827554 + 35827534 35827574 41 GTTGCAGCTCTAAGTGGCTTTGGCCTTCCCTTGGCATCCCA GTTGCAGCTCTAAGTGGCTTTAGCCTTCCCTTGGCATCCCA < 41bp 0.497318814244067 0.873256885269162 0.18929395 0.5993781 prediction 0.746513770538324 Functional Gain - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35827554 chr20:35827555 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_19196 0 0 1 0 1 Ribosome 0.438719488543918 0.438718520712419 0.1987562 0 hPsi_site_12920 iPseU_CNN:0.1987562;iRNA_PseU:0 12921 chr12 6926330 6926330 1 + G A LUSC 6926329 + 6926309 6926349 41 GAAAAATTTGACCTGTGAGGTGTGGGGACCCACCTCCCCTA GAAAAATTTGACCTGTGAGGTATGGGGACCCACCTCCCCTA < 41bp 0.498876982216534 0.873231236806323 0.50981826 0.72109604 prediction 0.746462473612646 Functional Gain - CD4 ENSG00000010610 CDS Human protein_coding chr12:6926329 chr12:6926330 synonymous SNV . 0 22 hPsi_associated_SNPs_19197 0 0 0 0 1 Endoplasmic reticulum 0.438718592992305 0.438718593003561 0.42255556 0 hPsi_site_12921 iPseU_CNN:0.42255556;iRNA_PseU:0 12922 chr17 46000540 46000540 1 + G A BLCA 46000539 + 46000519 46000559 41 AGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGG AGCCGGGAGCATCATCAGCCTAAATGCAGCCCAGTTGGCGG < 41bp 0.495056398769421 0.87315291227122 0.23730972 0.44206983 prediction 0.746305824542439 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:46000539 chr17:46000540 synonymous SNV . 0 22 hPsi_associated_SNPs_19198 0 0 0 0 0 Cytosol 0.438705806528694 0.438718568582606 0 0 hPsi_site_12922 iPseU_CNN:0;iRNA_PseU:0 12923 chr19 10395227 10395227 1 + G A ESCA 10395226 + 10395206 10395246 41 CCCGAGGGCCCAGCTCCTGCTGAAGGCCACCCCAGAGGACA CCCGAGGGCCCAGCTCCTGCTAAAGGCCACCCCAGAGGACA < 41bp 0.49735966552634 0.873152379050206 0.2286922 0.3271583 prediction 0.746304758100412 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395226 chr19:10395227 synonymous SNV . 0 22 hPsi_associated_SNPs_19199 0 0 1 0 0 Nucleus 0.438913021476226 0.438717760496246 0 0 hPsi_site_12923 iPseU_CNN:0;iRNA_PseU:0 12924 chr19 45490661 45490661 1 + G A BLCA 45490660 + 45490640 45490680 41 GAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGGTGAA GAGTTGTACGAGCAGTCAGATAAGGAGCAGGACTCGGTGAA < 41bp 0.496209320582838 0.873130059259673 0.26290268 0.62227273 prediction 0.746260118519346 Functional Gain - CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490660 chr19:45490661 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_19200 0 0 1 0 1 Cytosol 0.43872093311143 0.438721972611303 0.24454546 0 hPsi_site_12924 iPseU_CNN:0.24454546;iRNA_PseU:0 12925 chr17 40765712 40765712 1 + G A rs201417660 40765711 + 40765691 40765731 41 CCGGATTGCCACAGACCGCCTGCACATCCAGAACCCATCCT CCGGATTGCCACAGACCGCCTACACATCCAGAACCCATCCT < 41bp 0.49651172439755 0.873091462846481 0.26681265 0.5378325 prediction 0.746182925692963 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765711 chr17:40765712 synonymous SNV . 0 22 hPsi_associated_SNPs_19201 1 0 1 0 2 Ribosome 0.438718592995102 0.438718592931368 0.0756650000000001 0 hPsi_site_12925 iPseU_CNN:0.0756650000000001;iRNA_PseU:0 12926 chr9 139697151 139697151 1 + G A rs80306709 139697150 + 139697130 139697170 41 CCCCATTGAGCTGGACAAGCTGCAGAACCTCGTGGTCAACT CCCCATTGAGCTGGACAAGCTACAGAACCTCGTGGTCAACT < 41bp 0.501248696156934 0.874330918242703 0.38429388 0.6152192 prediction 0.746164444171537 Functional Gain - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139697150 chr9:139697151 synonymous SNV . 0 22 hPsi_associated_SNPs_19202 0 0 1 0 2 chromatin 0.438718592758151 0.438718592611724 0.2304384 0 hPsi_site_12926 iPseU_CNN:0.2304384;iRNA_PseU:0 12927 chr11 73670600 73670600 1 + G A LUAD 73670599 + 73670579 73670619 41 CCTGAAGGGTGGGATTCCTTTGGAGTTTGGATCCCAGACCC CCTGAAGGGTGGGATTCCTTTAGAGTTTGGATCCCAGACCC < 41bp 0.505038654746853 0.878099930164279 0.7950942 0.9107473 prediction 0.746122550834852 Functional Gain - DNAJB13 ENSG00000187726 CDS Human protein_coding chr11:73670599 chr11:73670600 synonymous SNV . 0 22 hPsi_associated_SNPs_19203 0 0 0 0 1 exosome 0.438718593011521 0.438718592995077 0.2313062 0 hPsi_site_12927 iPseU_CNN:0.2313062;iRNA_PseU:0 12928 chr2 102849490 102849490 1 + G A SKCM 102849489 + 102849469 102849509 41 GGAAAGCCAGAGGCATGCCGTGGATGCCCTGGTGTTGAATA GGAAAGCCAGAGGCATGCCGTAGATGCCCTGGTGTTGAATA < 41bp 0.493842837814665 0.87289506724159 0.2724236 0.3521453 prediction 0.745790134483179 Functional Gain - IL1RL2 ENSG00000115598 CDS Human protein_coding chr2:102849489 chr2:102849490 synonymous SNV . 0 22 hPsi_associated_SNPs_19204 0 0 0 0 2 exosome 0.438718631027185 0.438556518100122 0 0 hPsi_site_12928 iPseU_CNN:0;iRNA_PseU:0 12929 chr19 16268269 16268269 1 + G A SKCM 16268268 + 16268248 16268288 41 GGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCG GGATGTCCGGAGATCCACGGTAATCTCAGGCCCTGGGACCG < 41bp 0.500213504697817 0.873105344733333 0.37351558 0.8512552 prediction 0.745783680071031 Functional Gain - HSH2D ENSG00000196684 CDS Human protein_coding chr19:16268268 chr19:16268269 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19205 0 0 0 0 0 exosome 0.438720714253377 0.438718567103389 0.7025104 0 hPsi_site_12929 iPseU_CNN:0.7025104;iRNA_PseU:0 12930 chr1 27627909 27627909 1 + G A HNSC 27627908 + 27627888 27627928 41 CAGCAGCGCTTGTGATGCATTGGGCCGCGACATCACAGCTG CAGCAGCGCTTGTGATGCATTAGGCCGCGACATCACAGCTG < 41bp 0.504838802833947 0.877656105081673 0.25554806 0.53305316 prediction 0.745634604495451 Functional Gain - WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27627908 chr1:27627909 synonymous SNV . 0 22 hPsi_associated_SNPs_19206 0 0 0 0 1 Cytosol 0.438600111498894 0.439025440882042 0.0661063200000001 0 hPsi_site_12930 iPseU_CNN:0.0661063200000001;iRNA_PseU:0 12931 chr13 46287685 46287685 1 + G A LUAD 46287684 + 46287664 46287704 41 GCAGGAGGAGAACAAGTCTCTGCGGGAGGAGAACAAGGCCC GCAGGAGGAGAACAAGTCTCTACGGGAGGAGAACAAGGCCC < 41bp 0.50286009341493 0.875619175600964 0.32461458 0.6671202 prediction 0.745518164372068 Functional Gain - SPERT ENSG00000174015 CDS Human protein_coding chr13:46287684 chr13:46287685 synonymous SNV . 0 22 hPsi_associated_SNPs_19207 0 0 0 0 0 exosome 0.438718592995076 0.438718592995089 0.3342404 0 hPsi_site_12931 iPseU_CNN:0.3342404;iRNA_PseU:0 12932 chr3 14706577 14706577 1 + G A HNSC 14706576 + 14706556 14706596 41 GGGGCGTTCCCGGCGCTGTATGAGAAAGGATTTGCCAGATC GGGGCGTTCCCGGCGCTGTATAAGAAAGGATTTGCCAGATC < 41bp 0.503055453657501 0.87578954907039 0.6547395 0.7841085 prediction 0.745468190825779 Functional Gain - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14706576 chr3:14706577 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_19208 0 0 1 0 1 Cytosol 0.438722250062851 0.438719531267909 0.258738 0 hPsi_site_12932 iPseU_CNN:0.258738;iRNA_PseU:0 12933 chr9 95782677 95782677 1 + G A BLCA 95782676 + 95782656 95782696 41 GGTGGCGCCTTCAGCCAGGATGAGGACCCCAGCCTCTCTCC GGTGGCGCCTTCAGCCAGGATAAGGACCCCAGCCTCTCTCC < 41bp 0.493963871134154 0.87273336829169 0.23102063 0.40523818 prediction 0.74546673658338 Functional Gain - FGD3 ENSG00000127084 CDS Human protein_coding chr9:95782676 chr9:95782677 nonsynonymous SNV 0.825 2 22 hPsi_associated_SNPs_19209 0 0 0 0 2 exosome 0.438718588247739 0.438718590732238 0 0 hPsi_site_12933 iPseU_CNN:0;iRNA_PseU:0 12934 chr17 80011842 80011842 1 + G A LIHC 80011841 + 80011821 80011861 41 CACGCTGCGGGTGGAGGCCCTGAAGATGGCCCTCTCCTTCG CACGCTGCGGGTGGAGGCCCTAAAGATGGCCCTCTCCTTCG < 41bp 0.507071966305604 0.87977599457348 0.22209507 0.35313472 prediction 0.745408056535752 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80011841 chr17:80011842 synonymous SNV . 0 22 hPsi_associated_SNPs_19210 0 0 1 0 2 Cytosol 0.43871859149344 0.438718592995102 0 0 hPsi_site_12934 iPseU_CNN:0;iRNA_PseU:0 12935 chr17 42850721 42850721 1 + G A LUSC 42850720 + 42850700 42850740 41 CCAGGTGCAGGATGACCTCCTGGAGACCCTGGCCCGGCTCA CCAGGTGCAGGATGACCTCCTAGAGACCCTGGCCCGGCTCA < 41bp 0.488931245076983 0.872694855565522 0.35514438 0.6347197 prediction 0.745389711131044 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42850720 chr17:42850721 synonymous SNV . 0 22 hPsi_associated_SNPs_19211 0 0 0 0 2 chromatin 0.433082511898482 0.438682550821599 0.2694394 0 hPsi_site_12935 iPseU_CNN:0.2694394;iRNA_PseU:0 12936 chrX 54836272 54836272 1 + G A UCEC 54836271 + 54836251 54836291 41 GCACTGGAGGTCTCAGAGGATGTGAAGGTCTCAAAAGCCTC GCACTGGAGGTCTCAGAGGATATGAAGGTCTCAAAAGCCTC < 41bp 0.498949095090974 0.872677374681862 0.461997 0.6786123 prediction 0.745354749363723 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836271 chrX:54836272 nonsynonymous SNV 0.885 0 22 hPsi_associated_SNPs_19212 0 0 1 0 0 chromatin 0.438680896123457 0.438718905845715 0.3572246 0 hPsi_site_12936 iPseU_CNN:0.3572246;iRNA_PseU:0 12937 chr16 90029817 90029817 1 + G A UCEC 90029816 + 90029796 90029836 41 TGAAGCCGTACTTCATCACCTGCAGGGAGGCCATGGAGGCT TGAAGCCGTACTTCATCACCTACAGGGAGGCCATGGAGGCT < 41bp 0.495866341745356 0.872673642828313 0.28398496 0.55064523 prediction 0.745347285656626 Functional Gain - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90029816 chr16:90029817 nonsynonymous SNV 0.949 4 22 hPsi_associated_SNPs_19213 0 0 1 0 2 Ribosome 0.43871787271781 0.438715752241178 0.10129046 0 hPsi_site_12937 iPseU_CNN:0.10129046;iRNA_PseU:0 12938 chr11 62496335 62496335 1 + G A LUSC 62496334 + 62496314 62496354 41 GACAGTTATGGAGAAGCGTCTGCAGGAGGCTCAGCTGTACA GACAGTTATGGAGAAGCGTCTACAGGAGGCTCAGCTGTACA < 41bp 0.495686640509194 0.872672404219989 0.39270073 0.7891402 prediction 0.745344808439978 Functional Gain - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62496334 chr11:62496335 synonymous SNV . 0 22 hPsi_associated_SNPs_19214 0 0 1 0 1 Ribosome 0.438731552472385 0.438716630460413 0.5782804 0 hPsi_site_12938 iPseU_CNN:0.5782804;iRNA_PseU:0 12939 chr8 125555397 125555397 1 + G A HNSC 125555396 + 125555376 125555416 41 ACATAAGAATGAAAAGGATATGGCGAAGGCCACCCAGCTGC ACATAAGAATGAAAAGGATATAGCGAAGGCCACCCAGCTGC < 41bp 0.502828922282152 0.875488208947009 0.18839929 0.3605447 prediction 0.745318573329715 Functional Gain - NDUFB9 ENSG00000147684 CDS Human protein_coding chr8:125555396 chr8:125555397 nonsynonymous SNV 0.941 1 22 hPsi_associated_SNPs_19215 0 0 1 0 1 Ribosome 0.43871859299774 0.438718592768854 0 0 hPsi_site_12939 iPseU_CNN:0;iRNA_PseU:0 12940 chr19 15794393 15794393 1 + G A OV 15794392 + 15794372 15794412 41 CCTCCAGCACATGGACTTTCTGTATTACCTCTCCCATGACG CCTCCAGCACATGGACTTTCTATATTACCTCTCCCATGACG < 41bp 0.49029825172036 0.872639315631554 0.3864659 0.5936849 prediction 0.745278631263109 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15794392 chr19:15794393 synonymous SNV . 0 22 hPsi_associated_SNPs_19216 0 0 0 0 1 exosome 0.437991665789006 0.43782976682153 0.1873698 0 hPsi_site_12940 iPseU_CNN:0.1873698;iRNA_PseU:0 12941 chr12 113704107 113704107 1 + G A STAD 113704106 + 113704086 113704126 41 GGCCACGGCCCTGCTGCTGCTGCTGCTCTCCCTGTGCGAGG GGCCACGGCCCTGCTGCTGCTACTGCTCTCCCTGTGCGAGG < 41bp 0.503375381596957 0.875999666048044 0.35890287 0.6551656 prediction 0.745248568902175 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113704106 chr12:113704107 synonymous SNV . 0 22 hPsi_associated_SNPs_19217 0 0 1 0 1 chromatin 0.43871858389526 0.43871647445204 0.3103312 0 hPsi_site_12941 iPseU_CNN:0.3103312;iRNA_PseU:0 12942 chr20 61296330 61296330 1 + G A UCEC 61296329 + 61296309 61296349 41 ACCCCACGTTCATCCTGCTCTGCCTGGCCGGGGCCACCGAG ACCCCACGTTCATCCTGCTCTACCTGGCCGGGGCCACCGAG < 41bp 0.504221624296601 0.876827035935148 0.20561466 0.5843627 prediction 0.745210823277094 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61296329 chr20:61296330 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_19218 0 0 1 0 1 Endoplasmic reticulum 0.438710654303173 0.438463871546337 0.1687254 0 hPsi_site_12942 iPseU_CNN:0.1687254;iRNA_PseU:0 12943 chr15 27159984 27159984 1 + G A UCEC 27159983 + 27159963 27160003 41 GCAGAGTGCCCCATGCAGCTTGAGGACTTCCCGATGGATGC GCAGAGTGCCCCATGCAGCTTAAGGACTTCCCGATGGATGC < 41bp 0.511380224280578 0.883926447559565 0.32469225 0.4408822 prediction 0.745092446557973 Functional Gain - GABRA5 ENSG00000186297 CDS Human protein_coding chr15:27159983 chr15:27159984 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_19219 0 0 0 0 2 unknown 0.438718592995099 0.43871859299501 0 0 hPsi_site_12943 iPseU_CNN:0;iRNA_PseU:0 12944 chr6 42905473 42905473 1 + G A BLCA 42905472 + 42905452 42905492 41 CAGGGCATGTCAGAGACCTTTGAGACATTACACAACCTGGT CAGGGCATGTCAGAGACCTTTAAGACATTACACAACCTGGT < 41bp 0.497585223681926 0.872540422814751 0.24325559 0.353594 prediction 0.745080845629502 Functional Gain - CNPY3 ENSG00000137161 CDS Human protein_coding chr6:42905472 chr6:42905473 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_19220 0 0 1 0 1 Ribosome 0.438399465392573 0.441344270130971 0 0 hPsi_site_12944 iPseU_CNN:0;iRNA_PseU:0 12945 chr20 43566805 43566805 1 + G A rs61736209 43566804 + 43566784 43566824 41 CTCAGAGCTGTTGCTCATGCTGGAGTCTCCAGAATCCCTCC CTCAGAGCTGTTGCTCATGCTAGAGTCTCCAGAATCCCTCC < 41bp 0.499167882837993 0.872490788088648 0.2881902 0.4843854 prediction 0.744981576177296 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566804 chr20:43566805 stopgain 1.000 0 22 hPsi_associated_SNPs_19221 0 0 1 1 1 chromatin 0.439016212462888 0.439109371462923 0 0 hPsi_site_12945 iPseU_CNN:0;iRNA_PseU:0 12946 chr11 119028999 119028999 1 + G A UCEC 119028998 + 119028978 119029018 41 CCAGCACCCTCACACAGTTCTGCATCCTCTTCAAGAGGACC CCAGCACCCTCACACAGTTCTACATCCTCTTCAAGAGGACC < 41bp 0.491521661500996 0.872441340287376 0.2605328 0.45019618 prediction 0.744882680574752 Functional Gain - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119028998 chr11:119028999 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19222 0 0 0 0 2 exosome 0.438720522158387 0.43871966544032 0 0 hPsi_site_12946 iPseU_CNN:0;iRNA_PseU:0 12947 chr21 45389127 45389127 1 + G A rs115875072 45389126 + 45389106 45389146 41 GGACACCGTGGTCGAAGGGCTGAGGCGCCTGTCGGACTACC GGACACCGTGGTCGAAGGGCTAAGGCGCCTGTCGGACTACC < 41bp 0.504631927352121 0.877071043925156 0.27541077 0.6225546 prediction 0.74487823314607 Functional Gain - AGPAT3 ENSG00000160216 CDS Human protein_coding chr21:45389126 chr21:45389127 synonymous SNV . 0 22 hPsi_associated_SNPs_19223 0 0 1 0 1 Endoplasmic reticulum 0.438704801527875 0.438718569248717 0.2451092 0 hPsi_site_12947 iPseU_CNN:0.2451092;iRNA_PseU:0 12948 chr8 95690516 95690516 1 + G A BLCA 95690515 + 95690495 95690535 41 TTACCAGCCCTCTGTGATTTTGAATCCACGAGCACTGCAGC TTACCAGCCCTCTGTGATTTTAAATCCACGAGCACTGCAGC < 41bp 0.497784243206132 0.872428820600045 0.1943256 0.33274812 prediction 0.74485764120009 Functional Gain - ESRP1 ENSG00000104413 CDS Human protein_coding chr8:95690515 chr8:95690516 synonymous SNV . 0 22 hPsi_associated_SNPs_19224 0 0 0 0 2 Nucleus 0.47028236402877 0.43872106447096 0 0 hPsi_site_12948 iPseU_CNN:0;iRNA_PseU:0 12949 chr16 28895913 28895913 1 + G A UCEC 28895912 + 28895892 28895932 41 ACAGTGGGGGACAAAGTCCCTGCAGACATCCGAATCCTCGC ACAGTGGGGGACAAAGTCCCTACAGACATCCGAATCCTCGC < 41bp 0.491506008959056 0.872416336883463 0.26182467 0.38842708 prediction 0.744832673766925 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28895912 chr16:28895913 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_19225 0 0 0 0 2 chromatin 0.438718612524817 0.43871870603443 0 0 hPsi_site_12949 iPseU_CNN:0;iRNA_PseU:0 12950 chr17 1656029 1656029 1 + G A rs146323999 1656028 + 1656008 1656048 41 GAGGCCCACCAAGGTCCGGCTGCCTAAGCTGTATCTGAAAC GAGGCCCACCAAGGTCCGGCTACCTAAGCTGTATCTGAAAC < 41bp 0.505693678257325 0.878093280591403 0.22635192 0.5428137 prediction 0.744799204668156 Functional Gain - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1656028 chr17:1656029 synonymous SNV . 0 22 hPsi_associated_SNPs_19226 0 0 1 0 1 Endoplasmic reticulum 0.438718706292406 0.438718592848852 0.0856273999999999 0 hPsi_site_12950 iPseU_CNN:0.0856273999999999;iRNA_PseU:0 12951 chr11 47434972 47434972 1 + G A LGG 47434971 + 47434951 47434991 41 GCCCCCAACAAAGACCCCACTGCTGCTGCCGCCGCGCTCAA GCCCCCAACAAAGACCCCACTACTGCTGCCGCCGCGCTCAA < 41bp 0.499683722313084 0.872383987393882 0.2005941 0.3918863 prediction 0.744767974787764 Functional Gain - SLC39A13 ENSG00000165915 CDS Human protein_coding chr11:47434971 chr11:47434972 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_19227 0 0 0 0 2 Endoplasmic reticulum 0.438718592928129 0.438718593003327 0 0 hPsi_site_12951 iPseU_CNN:0;iRNA_PseU:0 12952 chr16 67914577 67914577 1 + G A UCEC 67914576 + 67914556 67914596 41 GTCATCTCCTCAGCTTCCACTGCCCTGTCCCAGGACATCCC GTCATCTCCTCAGCTTCCACTACCCTGTCCCAGGACATCCC < 41bp 0.508443610773205 0.880783017436643 0.2081418 0.385253 prediction 0.744678813326877 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914576 chr16:67914577 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19228 0 0 1 0 0 Cytosol 0.438718627401717 0.438718703926292 0 0 hPsi_site_12952 iPseU_CNN:0;iRNA_PseU:0 12953 chr10 133758920 133758920 1 + G A LUAD 133758919 + 133758899 133758939 41 TAGCAAAGGGACCATCCGCCTGTGTGACATGCGCTCCTCGG TAGCAAAGGGACCATCCGCCTATGTGACATGCGCTCCTCGG < 41bp 0.491737343494222 0.872338248154441 0.51316637 0.6744728 prediction 0.744676496308881 Functional Gain - PPP2R2D ENSG00000175470 CDS Human protein_coding chr10:133758919 chr10:133758920 synonymous SNV . 0 22 hPsi_associated_SNPs_19229 0 0 0 0 0 chromatin 0.43871812845725 0.438711910748925 0.32261286 0 hPsi_site_12953 iPseU_CNN:0.32261286;iRNA_PseU:0 12954 chr17 33318723 33318723 1 + G A CESC 33318722 + 33318702 33318742 41 GAGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCC GAGACAATCAGAGTCTTCTTTAAGCAGAGCAAGTCTTTCCC < 41bp 0.494838468833534 0.872326416997194 0.3260057 0.5049025 prediction 0.744652833994389 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33318722 chr17:33318723 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19230 0 0 1 0 0 Cytosol 0.436040988342038 0.438718848000367 0.00980500000000006 0 hPsi_site_12954 iPseU_CNN:0.00980500000000006;iRNA_PseU:0 12955 chr7 130007358 130007358 1 + G A SKCM 130007357 + 130007337 130007377 41 CATCCACAGCTACTCTCAGATGCTTATGTACCCTTACGGCC CATCCACAGCTACTCTCAGATACTTATGTACCCTTACGGCC < 41bp 0.508328480635739 0.88053646630451 0.25290048 0.8257847 prediction 0.744415971337543 Functional Gain - CPA5 ENSG00000158525 CDS Human protein_coding chr7:130007357 chr7:130007358 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19231 0 0 0 0 1 exosome 0.438737190228197 0.438717626770642 0.6515694 0 hPsi_site_12955 iPseU_CNN:0.6515694;iRNA_PseU:0 12956 chr17 4434046 4434046 1 + G A UCEC 4434045 + 4434025 4434065 41 GAACACGCGTACGCTCATGCTGTCCGTCTTCTACTTCGCCA GAACACGCGTACGCTCATGCTATCCGTCTTCTACTTCGCCA < 41bp 0.492971763178326 0.872204213331485 0.57795995 0.7894019 prediction 0.74440842666297 Functional Gain - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4434045 chr17:4434046 synonymous SNV . 0 22 hPsi_associated_SNPs_19232 0 0 0 0 1 Ribosome 0.438440308222523 0.438774210419072 0.4228839 0 hPsi_site_12956 iPseU_CNN:0.4228839;iRNA_PseU:0 12957 chr2 26998432 26998432 1 + G A BRCA 26998431 + 26998411 26998451 41 CTTCCTGGGCCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCA CTTCCTGGGCCGGAGGCTGGTACTGAGCCAGTGGCTGGGCA < 41bp 0.489851222371901 0.872198577188735 0.26785028 0.35428575 prediction 0.744397154377469 Functional Gain - SLC35F6 ENSG00000213699 CDS Human protein_coding chr2:26998431 chr2:26998432 synonymous SNV . 0 22 hPsi_associated_SNPs_19233 0 0 1 0 0 Ribosome 0.438718858453737 0.438718581866267 0 0 hPsi_site_12957 iPseU_CNN:0;iRNA_PseU:0 12958 chr1 179562779 179562779 1 + G A rs150066070 179562778 + 179562758 179562798 41 AGCTGTTGTGAAGAGTGAGTTGAAGGACCTGTTGGCGTTAT AGCTGTTGTGAAGAGTGAGTTAAAGGACCTGTTGGCGTTAT < 41bp 0.499433373690485 0.872175610044429 0.5141942 0.75551736 prediction 0.744351220088858 Functional Gain - TDRD5 ENSG00000162782 CDS Human protein_coding chr1:179562778 chr1:179562779 synonymous SNV . 0 22 hPsi_associated_SNPs_19234 0 0 0 0 0 cytosol 0.438718848297868 0.440002968703191 0.48264632 0 hPsi_site_12958 iPseU_CNN:0.48264632;iRNA_PseU:0 12959 chr16 84353120 84353120 1 + G A CESC 84353119 + 84353099 84353139 41 TGCCACATCCTGAGCCCAGGTGACGTGGCCGAAGGTATCCC TGCCACATCCTGAGCCCAGGTAACGTGGCCGAAGGTATCCC < 41bp 0.503226745344947 0.87540054370503 0.1790779 0.32076365 prediction 0.744347596720166 Functional Gain - WFDC1 ENSG00000103175 CDS Human protein_coding chr16:84353119 chr16:84353120 nonsynonymous SNV 0.040 1 22 hPsi_associated_SNPs_19235 0 0 0 0 2 exosome 0.438718575669455 0.438718595797938 0 0 hPsi_site_12959 iPseU_CNN:0;iRNA_PseU:0 12960 chr2 220286181 220286181 1 + G A UCEC 220286180 + 220286160 220286200 41 CCGGCACCTCAAGGATGAGATGGCCCGCCATCTGCGCGAGT CCGGCACCTCAAGGATGAGATAGCCCGCCATCTGCGCGAGT < 41bp 0.496076921510359 0.872171715023299 0.2167646 0.32928222 prediction 0.744343430046597 Functional Gain - DES ENSG00000175084 CDS Human protein_coding chr2:220286180 chr2:220286181 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19236 0 0 0 0 0 nucleus 0.438718618184975 0.438743851829551 0 0 hPsi_site_12960 iPseU_CNN:0;iRNA_PseU:0 12961 chr19 17652986 17652986 1 + G A UCEC 17652985 + 17652965 17653005 41 GCCGTGGGACTTGGCGCTGATGCAGACATGCTACCGTGAGG GCCGTGGGACTTGGCGCTGATACAGACATGCTACCGTGAGG < 41bp 0.500284254499202 0.872410902822974 0.29540724 0.6495286 prediction 0.744253296647544 Functional Gain - FAM129C ENSG00000167483 CDS Human protein_coding chr19:17652985 chr19:17652986 nonsynonymous SNV 0.364 4 22 hPsi_associated_SNPs_19237 0 0 0 0 1 exosome 0.438711489637589 0.438718418478905 0.2990572 0 hPsi_site_12961 iPseU_CNN:0.2990572;iRNA_PseU:0 12962 chr20 61574981 61574981 1 + G A UCEC 61574980 + 61574960 61575000 41 GGAGCGTACCCTGGCACTGCTGGCCTTTGACAGTCCCGAGG GGAGCGTACCCTGGCACTGCTAGCCTTTGACAGTCCCGAGG < 41bp 0.491373149320574 0.872116683239544 0.13968083 0.2385033 prediction 0.744233366479088 Functional Gain - GID8 ENSG00000101193 CDS Human protein_coding chr20:61574980 chr20:61574981 synonymous SNV . 0 22 hPsi_associated_SNPs_19238 0 0 1 0 1 Ribosome 0.438718595106892 0.438718597035315 0 0 hPsi_site_12962 iPseU_CNN:0;iRNA_PseU:0 12963 chr16 25228611 25228611 1 + G A rs138426074 25228610 + 25228590 25228630 41 GTCCTGGTACGAACGGTTTGTGCAGCCATGTCTGGTCGAAC GTCCTGGTACGAACGGTTTGTACAGCCATGTCTGGTCGAAC < 41bp 0.503174909532462 0.875260526013882 0.2924658 0.8197051 prediction 0.744171232962839 Functional Gain - AQP8 ENSG00000103375 CDS Human protein_coding chr16:25228610 chr16:25228611 synonymous SNV . 0 22 hPsi_associated_SNPs_19239 0 0 0 0 1 Ribosome 0.438864177180597 0.438732242443646 0.6394102 0 hPsi_site_12963 iPseU_CNN:0.6394102;iRNA_PseU:0 12964 chr19 39123290 39123290 1 + G A THYM 39123289 + 39123269 39123309 41 CCAGCACATTGACCGCTGGCTGCTGGCCGAGATGCTCGGGG CCAGCACATTGACCGCTGGCTACTGGCCGAGATGCTCGGGG < 41bp 0.504411564129155 0.876491373181485 0.11789006 0.49042287 prediction 0.744159618104661 Functional Gain - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39123289 chr19:39123290 synonymous SNV . 0 22 hPsi_associated_SNPs_19240 0 0 1 0 2 Cytosol 0.438702687843699 0.424976187287278 0 0 hPsi_site_12964 iPseU_CNN:0;iRNA_PseU:0 12965 chr9 115600864 115600864 1 + G A LUSC 115600863 + 115600843 115600883 41 CTGGCTGAACCCCTGGAGGGTGTGTCAGCTTGCATTGGGAA CTGGCTGAACCCCTGGAGGGTATGTCAGCTTGCATTGGGAA < 41bp 0.497005932818146 0.872046017162861 0.4044335 0.7099648 prediction 0.744092034325722 Functional Gain - SNX30 ENSG00000148158 CDS Human protein_coding chr9:115600863 chr9:115600864 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_19241 0 0 1 0 1 Ribosome 0.438718592994976 0.438718592991052 0.4199296 0 hPsi_site_12965 iPseU_CNN:0.4199296;iRNA_PseU:0 12966 chr1 177247745 177247745 1 + G A SKCM 177247744 + 177247724 177247764 41 GCTGCCCGATGACCGGTTCCTGAACTCCACAGCTATCTCCC GCTGCCCGATGACCGGTTCCTAAACTCCACAGCTATCTCCC < 41bp 0.487189806313491 0.871988470322692 0.25563136 0.6110156 prediction 0.743976940645385 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177247744 chr1:177247745 synonymous SNV . 0 22 hPsi_associated_SNPs_19242 0 0 0 0 1 Nucleus 0.438718490805243 0.438707315897772 0.2220312 0 hPsi_site_12966 iPseU_CNN:0.2220312;iRNA_PseU:0 12967 chr16 58550484 58550484 1 + G A rs3743567 58550483 + 58550463 58550503 41 CGAGTACCAGTCCATCGTGCTGCCCTTCATGGAAGCCCACC CGAGTACCAGTCCATCGTGCTACCCTTCATGGAAGCCCACC < 41bp 0.507676960978382 0.87965829969998 0.26407135 0.7638845 prediction 0.743962677443195 Functional Gain - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550483 chr16:58550484 synonymous SNV . 0 22 hPsi_associated_SNPs_19243 0 0 1 0 1 Ribosome 0.438718592961017 0.438718503729656 0.527769 0 hPsi_site_12967 iPseU_CNN:0.527769;iRNA_PseU:0 12968 chr9 130263353 130263353 1 + G A BLCA 130263352 + 130263332 130263372 41 CCAGGAGCCTCCTGAGTCTGTGAGGCCATCCGCTCCCCCTG CCAGGAGCCTCCTGAGTCTGTAAGGCCATCCGCTCCCCCTG < 41bp 0.510751966564727 0.88272718470409 0.4021038 0.6075033 prediction 0.743950436278726 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130263352 chr9:130263353 synonymous SNV . 0 22 hPsi_associated_SNPs_19244 0 0 0 0 2 chromatin 0.438719153786082 0.438718592995101 0.2150066 0 hPsi_site_12968 iPseU_CNN:0.2150066;iRNA_PseU:0 12969 chr6 108985057 108985057 1 + G A rs145259784 108985056 + 108985036 108985076 41 GATGAAGTCCAGGACGATGATGCGCCTCTCTCGCCCATGCT GATGAAGTCCAGGACGATGATACGCCTCTCTCGCCCATGCT < 41bp 0.50835269614235 0.880316263568707 0.579566 0.8988166 prediction 0.743927134852714 Functional Gain - FOXO3 ENSG00000118689 CDS Human protein_coding chr6:108985056 chr6:108985057 nonsynonymous SNV 0.019 1 22 hPsi_associated_SNPs_19245 0 0 1 0 0 Cytosol 0.438585326911545 0.437560344784388 0.6385012 0 hPsi_site_12969 iPseU_CNN:0.6385012;iRNA_PseU:0 12970 chr16 83994295 83994295 1 + G A KIRP 83994294 + 83994274 83994314 41 ACATGAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCAC ACATGAAGTCGGTCCTCACCTAGAAGCACCGGAAGGAGCAC < 41bp 0.500226135814262 0.872182275907383 0.25303555 0.26392096 prediction 0.743912280186242 Functional Gain - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83994294 chr16:83994295 stopgain 0.832 1 22 hPsi_associated_SNPs_19246 0 0 0 0 1 chromatin 0.438718590312908 0.438718464908337 0 0 hPsi_site_12970 iPseU_CNN:0;iRNA_PseU:0 12971 chr16 31498660 31498660 1 + G A STAD 31498659 + 31498639 31498679 41 AGGAGGGCTGGCCGCGCTGATGTACACGGACACGGTACAGA AGGAGGGCTGGCCGCGCTGATATACACGGACACGGTACAGA < 41bp 0.491893478675063 0.871918923834469 0.24587664 0.5462564 prediction 0.743837847668938 Functional Gain - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31498659 chr16:31498660 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19247 0 0 0 0 2 exosome 0.43877007308722 0.438821077443197 0.0925128 0 hPsi_site_12971 iPseU_CNN:0.0925128;iRNA_PseU:0 12972 chr18 72234525 72234525 1 + G A BLCA 72234524 + 72234504 72234544 41 ATGGAAGAGGCTGGCTCTGTTGCCCTGGAGGAACTTGTGGA ATGGAAGAGGCTGGCTCTGTTACCCTGGAGGAACTTGTGGA < 41bp 0.506048077482661 0.877964969133134 0.15329945 0.3288926 prediction 0.743833783300948 Functional Gain - CNDP1 ENSG00000150656 CDS Human protein_coding chr18:72234524 chr18:72234525 nonsynonymous SNV 0.959 2 22 hPsi_associated_SNPs_19248 0 0 0 0 1 exosome 0.438718172228232 0.438719339554839 0 0 hPsi_site_12972 iPseU_CNN:0;iRNA_PseU:0 12973 chr12 7050056 7050056 1 + G A UCEC 7050055 + 7050035 7050075 41 CCCTCCAGCCTCTGCCTCGGTGCACCCTCTCATTGACCCCC CCCTCCAGCCTCTGCCTCGGTACACCCTCTCATTGACCCCC < 41bp 0.492988715493719 0.871872862962547 0.5149556 0.82976913 prediction 0.743745725925094 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7050055 chr12:7050056 synonymous SNV . 0 22 hPsi_associated_SNPs_19249 0 0 1 0 1 Endoplasmic reticulum 0.438717164021495 0.438688606630956 0.62962706 0 hPsi_site_12973 iPseU_CNN:0.62962706;iRNA_PseU:0 12974 chr11 73625472 73625472 1 + G A ESCA 73625471 + 73625451 73625491 41 CATGCAGGTGAACGGGAGGTTGGAACAGAGGCCAAAATGCT CATGCAGGTGAACGGGAGGTTAGAACAGAGGCCAAAATGCT < 41bp 0.490019363966976 0.871845542078201 0.345241 0.75400746 prediction 0.743691084156402 Functional Gain - PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73625471 chr11:73625472 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_19250 0 0 0 1 1 Ribosome 0.438720535093504 0.438718525225955 0.50801492 0 hPsi_site_12974 iPseU_CNN:0.50801492;iRNA_PseU:0 12975 chr12 131569153 131569153 1 + G A COAD 131569152 + 131569132 131569172 41 GAAACCTCACCTACTCCGTCTGCCGCTGCACTCACCTCACC GAAACCTCACCTACTCCGTCTACCGCTGCACTCACCTCACC < 41bp 0.480527211295181 0.871830234756324 0.35075238 0.6874677 prediction 0.743660469512649 Functional Gain - ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131569152 chr12:131569153 nonsynonymous SNV 0.721 5 22 hPsi_associated_SNPs_19251 0 0 1 0 2 chromatin 0.438712386366554 0.438690221853679 0.3749354 0 hPsi_site_12975 iPseU_CNN:0.3749354;iRNA_PseU:0 12976 chrX 153418516 153418516 1 + G A rs5986964 153418515 + 153418495 153418535 41 TGATGCCAAGCTGGCCATCGTGGGCATTGCCTTCTCCTGGA TGATGCCAAGCTGGCCATCGTAGGCATTGCCTTCTCCTGGA < 41bp 0.504857733992158 0.876685843960992 0.21975431 0.4539204 prediction 0.743656219937668 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153418515 chrX:153418516 synonymous SNV . 0 22 hPsi_associated_SNPs_19252 0 0 0 0 1 unknown 0.438736753050768 0.438715612850832 0 0 hPsi_site_12976 iPseU_CNN:0;iRNA_PseU:0 12977 chr17 42083545 42083545 1 + G A HNSC 42083544 + 42083524 42083564 41 CGCGTCGCTGGCCAAGGCGCTGCGGCCCACCAAAATCATCT CGCGTCGCTGGCCAAGGCGCTACGGCCCACCAAAATCATCT < 41bp 0.51103747897624 0.882851582904338 0.2908544 0.5697061 prediction 0.743628207856194 Functional Gain - NAGS ENSG00000161653 CDS Human protein_coding chr17:42083544 chr17:42083545 synonymous SNV . 0 22 hPsi_associated_SNPs_19253 0 0 0 0 1 Cytosol 0.438718555402677 0.438718427192705 0.1394122 0 hPsi_site_12977 iPseU_CNN:0.1394122;iRNA_PseU:0 12978 chr1 110586445 110586445 1 + G A LUAD 110586444 + 110586424 110586464 41 CACAGACTGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGG CACAGACTGACAGGCTGACTTACCCCAAAGGGCTCCCGTGG < 41bp 0.499092532475067 0.8717432089564 0.32539526 0.53635293 prediction 0.7434864179128 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586444 chr1:110586445 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_19254 0 0 1 0 1 Cytosol 0.438719524984613 0.438719191306608 0.0727058599999999 0 hPsi_site_12978 iPseU_CNN:0.0727058599999999;iRNA_PseU:0 12979 chr8 145094970 145094970 1 + G A UCEC 145094969 + 145094949 145094989 41 GACAGGCACCCTCAGCACGCTGCTGTCTGGCCCAGCACCCA GACAGGCACCCTCAGCACGCTACTGTCTGGCCCAGCACCCA < 41bp 0.498264938968096 0.871719968962776 0.23095807 0.7668736 prediction 0.743439937925553 Functional Gain - SPATC1 ENSG00000186583 CDS Human protein_coding chr8:145094969 chr8:145094970 synonymous SNV . 0 22 hPsi_associated_SNPs_19255 0 0 0 0 0 chromatin 0.438727149905078 0.438707326998371 0.5337472 0 hPsi_site_12979 iPseU_CNN:0.5337472;iRNA_PseU:0 12980 chr13 111279844 111279844 1 + G A rs3742192 111279843 + 111279823 111279863 41 CTGCCCCGGCTGCATGCTCTTGTCGTAGGACCTGGCTTGGG CTGCCCCGGCTGCATGCTCTTATCGTAGGACCTGGCTTGGG < 41bp 0.482910891448725 0.871700440288025 0.37629482 0.65058005 prediction 0.74340088057605 Functional Gain - NAXD ENSG00000213995 CDS Human protein_coding chr13:111279843 chr13:111279844 nonsynonymous SNV 0.004 3 22 hPsi_associated_SNPs_19256 0 0 1 1 2 Cytosol 0.438718903864657 0.438718593304654 0.3011601 0 hPsi_site_12980 iPseU_CNN:0.3011601;iRNA_PseU:0 12981 chr20 60854271 60854271 1 + G A STAD 60854270 + 60854250 60854290 41 AGTCACCACCCCCCCATCAGTGCGTTCCACTCGGAAGGTCT AGTCACCACCCCCCCATCAGTACGTTCCACTCGGAAGGTCT < 41bp 0.507615797858766 0.879244099246777 0.21424365 0.6094625 prediction 0.743256602776022 Functional Gain - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60854270 chr20:60854271 nonsynonymous SNV 0.062 4 22 hPsi_associated_SNPs_19257 0 0 1 0 1 Ribosome 0.438363242651028 0.438128504383193 0.218925 0 hPsi_site_12981 iPseU_CNN:0.218925;iRNA_PseU:0 12982 chr3 49008048 49008048 1 + G A rs373542476 49008047 + 49008027 49008067 41 GAGTCATTACCAGCTCCAGCTGTGCCCTGGTGCAGACTGCC GAGTCATTACCAGCTCCAGCTATGCCCTGGTGCAGACTGCC < 41bp 0.508562269720145 0.880126883058311 0.21719769 0.3295403 prediction 0.743129226676333 Functional Gain - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49008047 chr3:49008048 synonymous SNV . 0 22 hPsi_associated_SNPs_19258 0 0 1 0 1 Cytosol 0.438932530853472 0.439155107456958 0 0 hPsi_site_12982 iPseU_CNN:0;iRNA_PseU:0 12983 chr19 36349721 36349721 1 + G A rs57079408 36349720 + 36349700 36349740 41 CCGCCCTACCCCTGAATTGCTGTGGTTCCGAGATGGGGTCC CCGCCCTACCCCTGAATTGCTATGGTTCCGAGATGGGGTCC < 41bp 0.511126273384127 0.882648657078489 0.24584168 0.33603686 prediction 0.743044767388724 Functional Gain - KIRREL2 ENSG00000126259 CDS Human protein_coding chr19:36349720 chr19:36349721 synonymous SNV . 0 22 hPsi_associated_SNPs_19259 0 0 0 0 1 exosome 0.438718592985742 0.438718592748331 0 0 hPsi_site_12983 iPseU_CNN:0;iRNA_PseU:0 12984 chr12 53431341 53431341 1 + G A COAD 53431340 + 53431320 53431360 41 ACCAAAGGAGAATGCTTGGGTGAAGCGAAGTTCTAACCCTC ACCAAAGGAGAATGCTTGGGTAAAGCGAAGTTCTAACCCTC < 41bp 0.501214211197644 0.872732338782103 0.3125577 0.41893178 prediction 0.743036255168919 Functional Gain - EIF4B ENSG00000063046 CDS Human protein_coding chr12:53431340 chr12:53431341 synonymous SNV . 0 22 hPsi_associated_SNPs_19260 0 0 1 0 1 Cytosol 0.438688486545717 0.438718593164475 0 0 hPsi_site_12984 iPseU_CNN:0;iRNA_PseU:0 12985 chr11 71932021 71932021 1 + G A rs116699117 71932020 + 71932000 71932040 41 CTGGGACCACTGCGGCAAGATGGAGCCCGCCTGCAAGCGCC CTGGGACCACTGCGGCAAGATAGAGCCCGCCTGCAAGCGCC < 41bp 0.485663217924337 0.871516302592741 0.21885103 0.4003966 prediction 0.743032605185482 Functional Gain - FOLR2 ENSG00000165457 CDS Human protein_coding chr11:71932020 chr11:71932021 nonsynonymous SNV 0.444 0 22 hPsi_associated_SNPs_19261 0 0 0 0 1 Cytosol 0.438718683205765 0.438718095540368 0 0 hPsi_site_12985 iPseU_CNN:0;iRNA_PseU:0 12986 chr3 9979755 9979755 1 + G A LUAD 9979754 + 9979734 9979774 41 GCTCAGATTCCCTGAAGCTCTGCTGCCCCGCAGGCACCTTC GCTCAGATTCCCTGAAGCTCTACTGCCCCGCAGGCACCTTC < 41bp 0.487565478154322 0.871469921806201 0.31387898 0.6404393 prediction 0.742939843612403 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9979754 chr3:9979755 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19262 0 0 1 0 2 chromatin 0.438719111412141 0.438718746765674 0.2808786 0 hPsi_site_12986 iPseU_CNN:0.2808786;iRNA_PseU:0 12987 chr17 48156529 48156529 1 + G A STAD 48156528 + 48156508 48156548 41 AGTCAGCAATGGCAAGTGGCTGCTGTATCCCACGGAGATCA AGTCAGCAATGGCAAGTGGCTACTGTATCCCACGGAGATCA < 41bp 0.504844484528648 0.876294933238259 0.39392194 0.73088527 prediction 0.742900897419221 Functional Gain - ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48156528 chr17:48156529 synonymous SNV . 0 22 hPsi_associated_SNPs_19263 0 0 0 0 2 Cytosol 0.438679719889599 0.438652884812271 0.46177054 0 hPsi_site_12987 iPseU_CNN:0.46177054;iRNA_PseU:0 12988 chr16 335550 335550 1 + G A COAD 335549 + 335529 335569 41 GGCGGCCGACAATGAGCACGTGCTGCAGTACTTTGGACTCA GGCGGCCGACAATGAGCACGTACTGCAGTACTTTGGACTCA < 41bp 0.486623202058864 0.871450142969586 0.24937382 0.6437055 prediction 0.742900285939172 Functional Gain - PDIA2 ENSG00000185615 CDS Human protein_coding chr16:335549 chr16:335550 synonymous SNV . 0 22 hPsi_associated_SNPs_19264 0 0 0 0 1 nucleolus 0.438381106647344 0.439057376406319 0.287411 0 hPsi_site_12988 iPseU_CNN:0.287411;iRNA_PseU:0 12989 chr11 62159067 62159067 1 + G A BLCA 62159066 + 62159046 62159086 41 TGGGGAAAGCATCCTGAAGGTGAACCTGGCTAGACTCACCC TGGGGAAAGCATCCTGAAGGTAAACCTGGCTAGACTCACCC < 41bp 0.503011673008123 0.874455367256172 0.5402986 0.8429394 prediction 0.742887388496097 Functional Gain - ASRGL1 ENSG00000162174 CDS Human protein_coding chr11:62159066 chr11:62159067 synonymous SNV . 0 22 hPsi_associated_SNPs_19265 0 0 0 0 2 Ribosome 0.437646431410407 0.438718590840201 0.6052816 0 hPsi_site_12989 iPseU_CNN:0.6052816;iRNA_PseU:0 12990 chr17 77709099 77709099 1 + G A rs141147522 77709098 + 77709078 77709118 41 GAGGGAGATGGTGCGGCAGGTGGACCGGACCGTGGGCTACC GAGGGAGATGGTGCGGCAGGTAGACCGGACCGTGGGCTACC < 41bp 0.497001108562264 0.871364619655319 0.21928763 0.655377 prediction 0.742729239310638 Functional Gain - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77709098 chr17:77709099 synonymous SNV . 0 22 hPsi_associated_SNPs_19266 0 0 0 0 0 exosome 0.438641414727163 0.438723279416976 0.310754 0 hPsi_site_12990 iPseU_CNN:0.310754;iRNA_PseU:0 12991 chr16 66434902 66434902 1 + G A LUSC 66434901 + 66434881 66434921 41 CAGTGGTAGCCATCTTACTCTGCATCCTCACCATCACAGGT CAGTGGTAGCCATCTTACTCTACATCCTCACCATCACAGGT < 41bp 0.503972213476032 0.875320119293355 0.25189942 0.52955115 prediction 0.742695811634647 Functional Gain - CDH5 ENSG00000179776 CDS Human protein_coding chr16:66434901 chr16:66434902 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_19267 0 0 0 0 1 Cytosol 0.438467429662594 0.438263627679658 0.0591022999999999 0 hPsi_site_12991 iPseU_CNN:0.0591022999999999;iRNA_PseU:0 12992 chr11 65733863 65733863 1 + G A SKCM 65733862 + 65733842 65733882 41 TCCAAGTATGACGAAGAGCTTGAAGGGGAGCGGCCACATTC TCCAAGTATGACGAAGAGCTTAAAGGGGAGCGGCCACATTC < 41bp 0.50137380358875 0.872711644053222 0.28363487 0.59476644 prediction 0.742675680928944 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65733862 chr11:65733863 nonsynonymous SNV 0.505 3 22 hPsi_associated_SNPs_19268 0 0 1 0 1 Cytosol 0.438730168818808 0.43871845227423 0.18953288 0 hPsi_site_12992 iPseU_CNN:0.18953288;iRNA_PseU:0 12993 chr15 85327370 85327370 1 + G A UCEC 85327369 + 85327349 85327389 41 GAAGCAACAGAGCACAGCACTGCAGGCATCCACCCTGGCCC GAAGCAACAGAGCACAGCACTACAGGCATCCACCCTGGCCC < 41bp 0.494429085687375 0.871309026540411 0.32234973 0.6771227 prediction 0.742618053080821 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85327369 chr15:85327370 synonymous SNV . 0 22 hPsi_associated_SNPs_19269 0 0 1 0 0 Cytosol 0.438719001228373 0.438697669371823 0.3542454 0 hPsi_site_12993 iPseU_CNN:0.3542454;iRNA_PseU:0 12994 chr17 76130033 76130033 1 + G A LGG 76130032 + 76130012 76130052 41 ATGGGACTTCTGCATCCGGGTGCAGGAAGCAGCCACCATCA ATGGGACTTCTGCATCCGGGTACAGGAAGCAGCCACCATCA < 41bp 0.492458952567163 0.871283711217495 0.22521546 0.7174345 prediction 0.74256742243499 Functional Gain - TMC8 ENSG00000167895 CDS Human protein_coding chr17:76130032 chr17:76130033 synonymous SNV . 0 22 hPsi_associated_SNPs_19270 0 0 0 0 2 chromatin 0.438718599558249 0.438718579258857 0.434869 0 hPsi_site_12994 iPseU_CNN:0.434869;iRNA_PseU:0 12995 chr11 71850028 71850028 1 + G A LUSC 71850027 + 71850007 71850047 41 TGCAGTCCCTGGAAGAAGAATGCCTGCTGCACGGCCAGCAC TGCAGTCCCTGGAAGAAGAATACCTGCTGCACGGCCAGCAC < 41bp 0.503041134860493 0.874313995428534 0.27302676 0.45615193 prediction 0.742545721136084 Functional Gain - FOLR3 ENSG00000110203 CDS Human protein_coding chr11:71850027 chr11:71850028 nonsynonymous SNV 0.939 2 22 hPsi_associated_SNPs_19271 0 0 0 0 1 Endoplasmic reticulum 0.438520494421857 0.438871549452448 0 0 hPsi_site_12995 iPseU_CNN:0;iRNA_PseU:0 12996 chrX 153046743 153046743 1 + G A UCEC 153046742 + 153046722 153046762 41 CACACCGGTGCCTCAGATGCTGCAGGGCCTTCTGGGCTCCG CACACCGGTGCCTCAGATGCTACAGGGCCTTCTGGGCTCCG < 41bp 0.505555488676398 0.876819539732646 0.45032665 0.8002128 prediction 0.742528102112495 Functional Gain - SRPK3 ENSG00000184343 CDS Human protein_coding chrX:153046742 chrX:153046743 synonymous SNV . 0 22 hPsi_associated_SNPs_19272 0 0 0 0 2 chromatin 0.43871858454151 0.438718576948965 0.6004256 0 hPsi_site_12996 iPseU_CNN:0.6004256;iRNA_PseU:0 12997 chr1 153749125 153749125 1 + G A LIHC 153749124 + 153749104 153749144 41 GAAGTGTCCGCTGAAGTGGATGGGCCAGTGCCAGGATACCT GAAGTGTCCGCTGAAGTGGATAGGCCAGTGCCAGGATACCT < 41bp 0.495829267740765 0.871224866628045 0.32185173 0.47672388 prediction 0.742449733256089 Functional Gain - SLC27A3 ENSG00000143554 CDS Human protein_coding chr1:153749124 chr1:153749125 nonsynonymous SNV 0.547 0 22 hPsi_associated_SNPs_19273 0 0 0 0 1 nucleoplasm 0.438718532052536 0.438661991681195 0 0 hPsi_site_12997 iPseU_CNN:0;iRNA_PseU:0 12998 chr19 49416330 49416330 1 + G A STAD 49416329 + 49416309 49416349 41 AGAGTTCAAGCGCTACGAGATGCTTAAGGAACACGAGAGAC AGAGTTCAAGCGCTACGAGATACTTAAGGAACACGAGAGAC < 41bp 0.491551632114147 0.871204381771763 0.4148655 0.8844408 prediction 0.742408763543525 Functional Gain - NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49416329 chr19:49416330 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_19274 0 0 1 0 1 Ribosome 0.439737408298304 0.438774585365637 0.7688816 0 hPsi_site_12998 iPseU_CNN:0.7688816;iRNA_PseU:0 12999 chr7 40127879 40127879 1 + G A rs17496712 40127878 + 40127858 40127898 41 AGAACCAACACACCCCAGGGTGTGCTGCCATCTTCACAGCT AGAACCAACACACCCCAGGGTATGCTGCCATCTTCACAGCT < 41bp 0.504027826051629 0.87523220043372 0.28234434 0.5859989 prediction 0.742408748764181 Functional Gain - CDK13 ENSG00000065883 CDS Human protein_coding chr7:40127878 chr7:40127879 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_19275 0 0 1 0 1 Nucleus 0.438718593080253 0.438718592995251 0.1719978 0 hPsi_site_12999 iPseU_CNN:0.1719978;iRNA_PseU:0 13000 chr2 27262671 27262671 1 + G A BRCA 27262670 + 27262650 27262690 41 CCTGCTAGCCAACAAGCGTGTGCCAAGCTCTACTCCTACAG CCTGCTAGCCAACAAGCGTGTACCAAGCTCTACTCCTACAG < 41bp 0.504410981657128 0.875614776747708 0.3476966 0.83628225 prediction 0.742407590181159 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27262670 chr2:27262671 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_19276 0 0 1 2 2 Ribosome 0.438719207121723 0.438730127860363 0.6725645 0 hPsi_site_13000 iPseU_CNN:0.6725645;iRNA_PseU:0 13001 chr20 3888790 3888790 1 + G A LGG 3888789 + 3888769 3888809 41 GTGTGGACGCAAAGGCAATCTGCACTTTATACGCTTTCCCA GTGTGGACGCAAAGGCAATCTACACTTTATACGCTTTCCCA < 41bp 0.502401096494159 0.873601736753955 0.33946407 0.5001641 prediction 0.742401280519592 Functional Gain - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888789 chr20:3888790 synonymous SNV . 0 22 hPsi_associated_SNPs_19277 0 0 1 13 0 Ribosome 0.438718658903242 0.438718837534352 0.000328200000000001 0 hPsi_site_13001 iPseU_CNN:0.000328200000000001;iRNA_PseU:0 13002 chr19 41235183 41235183 1 + G A HNSC 41235182 + 41235162 41235202 41 GCAGCGCAGCCTGGAGCAGCTGATGAAAGACCCGCTGCGAC GCAGCGCAGCCTGGAGCAGCTAATGAAAGACCCGCTGCGAC < 41bp 0.509832263068614 0.881017280499554 0.21557665 0.615451 prediction 0.74237003486188 Functional Gain - ITPKC ENSG00000086544 CDS Human protein_coding chr19:41235182 chr19:41235183 synonymous SNV . 0 22 hPsi_associated_SNPs_19278 0 0 1 0 1 Cytosol 0.436795780597814 0.438706391981951 0.230902 0 hPsi_site_13002 iPseU_CNN:0.230902;iRNA_PseU:0 13003 chr12 49723991 49723991 1 + G A LUAD 49723990 + 49723970 49724010 41 GGGCTGGTAGGGGGCCAGTGTGTCCCTCTTAATGGAGGCTC GGGCTGGTAGGGGGCCAGTGTATCCCTCTTAATGGAGGCTC < 41bp 0.494161354501148 0.871177391189474 0.36775488 0.43238327 prediction 0.742354782378949 Functional Gain - TROAP ENSG00000135451 CDS Human protein_coding chr12:49723990 chr12:49723991 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_19279 0 0 1 0 1 Ribosome 0.438718602203636 0.438718593309605 0 0 hPsi_site_13003 iPseU_CNN:0;iRNA_PseU:0 13004 chr12 56077639 56077639 1 + G A SKCM 56077638 + 56077618 56077658 41 GAGCATGTGGCAGAACCATATGGAAGCTGGGCCTTCATGTG GAGCATGTGGCAGAACCATATAGAAGCTGGGCCTTCATGTG < 41bp 0.500109852762095 0.871245937082636 0.2554592 0.33103025 prediction 0.742272168641082 Functional Gain - METTL7B ENSG00000170439 CDS Human protein_coding chr12:56077638 chr12:56077639 nonsynonymous SNV 0.618 3 22 hPsi_associated_SNPs_19280 0 0 1 0 1 Cytosol 0.43859501708665 0.438696015175436 0 0 hPsi_site_13004 iPseU_CNN:0;iRNA_PseU:0 IgA nephropathy 13005 chr2 46587838 46587838 1 + G A ESCA 46587837 + 46587817 46587857 41 GCGGGACTTCTTCATGAGGATGAAGTGCACGGTCACCAACA GCGGGACTTCTTCATGAGGATAAAGTGCACGGTCACCAACA < 41bp 0.494763538655629 0.871117439104531 0.30056 0.6664078 prediction 0.742234878209062 Functional Gain - EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46587837 chr2:46587838 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19281 0 0 1 0 2 Cytosol 0.43873057474193 0.438726341293592 0.3328156 0 hPsi_site_13005 iPseU_CNN:0.3328156;iRNA_PseU:0 13006 chr17 27185605 27185605 1 + G A rs114192384 27185604 + 27185584 27185624 41 CCATGTCCAGGTAGATTGTTTGAAGCAGAAGTCAGTTCTCC CCATGTCCAGGTAGATTGTTTAAAGCAGAAGTCAGTTCTCC < 41bp 0.503433922995007 0.874526996440068 0.64030606 0.7479746 prediction 0.742186146890121 Functional Gain - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27185604 chr17:27185605 synonymous SNV . 0 22 hPsi_associated_SNPs_19282 0 0 1 2 2 Ribosome 0.438809459419513 0.438718485851696 0.21533708 0 hPsi_site_13006 iPseU_CNN:0.21533708;iRNA_PseU:0 13007 chr17 7849150 7849150 1 + G A GBM 7849149 + 7849129 7849169 41 CGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAA CGTGGCCCTGAAGCCTGTATTACAGCAGAGCCGGGAAGCAA < 41bp 0.480958990034551 0.871060579390201 0.20121819 0.3410129 prediction 0.742121158780402 Functional Gain - CNTROB ENSG00000170037 CDS Human protein_coding chr17:7849149 chr17:7849150 synonymous SNV . 0 22 hPsi_associated_SNPs_19283 0 0 1 0 0 Nucleus 0.438718528225235 0.438716675254067 0 0 hPsi_site_13007 iPseU_CNN:0;iRNA_PseU:0 13008 chr1 202287147 202287147 1 + G A rs150607537 202287146 + 202287126 202287166 41 CCTGGCCGTGTGGGCCATCGTGTTGCTCTCCGTGCTCTGCA CCTGGCCGTGTGGGCCATCGTATTGCTCTCCGTGCTCTGCA < 41bp 0.506906078477134 0.877955561341906 0.54614973 0.71723586 prediction 0.742098965729544 Functional Gain - LGR6 ENSG00000133067 CDS Human protein_coding chr1:202287146 chr1:202287147 synonymous SNV . 0 22 hPsi_associated_SNPs_19284 0 0 0 0 1 nucleoplasm 0.438718935769313 0.438723607965275 0.34217226 0 hPsi_site_13008 iPseU_CNN:0.34217226;iRNA_PseU:0 13009 chr19 42821926 42821926 1 + G A COAD 42821925 + 42821905 42821945 41 CGGCTACGGGCTCATTGGACTGCAGGTGGCGGCCTACGTGT CGGCTACGGGCTCATTGGACTACAGGTGGCGGCCTACGTGT < 41bp 0.491734855279482 0.871040292023092 0.22052899 0.40939763 prediction 0.742080584046184 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42821925 chr19:42821926 synonymous SNV . 0 22 hPsi_associated_SNPs_19285 0 0 0 0 1 nucleoplasm 0.438718592981565 0.438718582925911 0 0 hPsi_site_13009 iPseU_CNN:0;iRNA_PseU:0 13010 chr6 33424018 33424018 1 + G A STAD 33424017 + 33423997 33424037 41 GGGGGGACACCCCCTGCAGATGGAAAACGCTTTGGTTGCCT GGGGGGACACCCCCTGCAGATAGAAAACGCTTTGGTTGCCT < 41bp 0.501627270464449 0.872649584938383 0.22621989 0.36319393 prediction 0.742044628947867 Functional Gain - ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33424017 chr6:33424018 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19286 0 0 0 0 0 chromatin 0.438718592995102 0.438718593019107 0 0 hPsi_site_13010 iPseU_CNN:0;iRNA_PseU:0 13011 chr5 7897283 7897283 1 + G A rs12347 7897282 + 7897262 7897302 41 GGAAGCCCCAGCAAAGTATGTGCAAGACAACATCCAGCTTC GGAAGCCCCAGCAAAGTATGTACAAGACAACATCCAGCTTC < 41bp 0.502624490781571 0.873619116427471 0.59019595 0.9373032 prediction 0.741989251291801 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7897282 chr5:7897283 synonymous SNV . 0 22 hPsi_associated_SNPs_19287 2 0 1 2 1 Nucleus 0.438718453915956 0.438718594199112 0.6942145 0 hPsi_site_13011 iPseU_CNN:0.6942145;iRNA_PseU:0 13012 chr22 49103556 49103556 1 + G A UCEC 49103555 + 49103535 49103575 41 TCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTG TCATCAAGACCAAGCAGTGGTATGACATGCTTCCGTGTCTG < 41bp 0.501874470130472 0.872840056320436 0.31927434 0.5649239 prediction 0.741931172379927 Functional Gain - FAM19A5 ENSG00000219438 CDS Human protein_coding chr22:49103555 chr22:49103556 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19288 0 0 1 0 1 membrane 0.435116901231443 0.4389758180263 0.1298478 0 hPsi_site_13012 iPseU_CNN:0.1298478;iRNA_PseU:0 13013 chr1 110170723 110170723 1 + G A PRAD 110170722 + 110170702 110170742 41 CAGGTGGACACCCACATCCATGCCTCGTCCTGCATGAACCA CAGGTGGACACCCACATCCATACCTCGTCCTGCATGAACCA < 41bp 0.500485841301744 0.87144725103995 0.28621715 0.50795406 prediction 0.741922819476412 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170722 chr1:110170723 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_19289 0 0 1 0 1 Cytosol 0.438737355601053 0.438727747376029 0.01590812 0 hPsi_site_13013 iPseU_CNN:0.01590812;iRNA_PseU:0 13014 chr17 7755572 7755572 1 + G A HNSC 7755571 + 7755551 7755591 41 GCAGCGACCCGGAGACCTCGTGTGGATTAATGCGGGGACTG GCAGCGACCCGGAGACCTCGTATGGATTAATGCGGGGACTG < 41bp 0.491318603856397 0.870936992328226 0.32734 0.5978286 prediction 0.741873984656451 Functional Gain - KDM6B ENSG00000132510 CDS Human protein_coding chr17:7755571 chr17:7755572 synonymous SNV . 0 22 hPsi_associated_SNPs_19290 0 0 0 0 1 Cytosol 0.438718592969856 0.438718589973842 0.1956572 0 hPsi_site_13014 iPseU_CNN:0.1956572;iRNA_PseU:0 13015 chr9 127618838 127618838 1 + G A LUAD 127618837 + 127618817 127618857 41 CAGGCGCTAGAGGGACACAGTGCCAACATCAGCTGCCTGTG CAGGCGCTAGAGGGACACAGTACCAACATCAGCTGCCTGTG < 41bp 0.487889491266621 0.870903879240592 0.47461644 0.65169877 prediction 0.741807758481184 Functional Gain - WDR38 ENSG00000136918 CDS Human protein_coding chr9:127618837 chr9:127618838 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_19291 0 0 0 0 2 nucleolus 0.438736751581963 0.438765241987298 0.30339754 0 hPsi_site_13015 iPseU_CNN:0.30339754;iRNA_PseU:0 13016 chr20 33584223 33584223 1 + G A UCEC 33584222 + 33584202 33584242 41 GACCAAGGAGAAGAAGGCGTTGCAGGAGGCCCACCAACAGG GACCAAGGAGAAGAAGGCGTTACAGGAGGCCCACCAACAGG < 41bp 0.49685057868553 0.870883508720243 0.31407124 0.81598425 prediction 0.741767017440486 Functional Gain - MYH7B ENSG00000078814 CDS Human protein_coding chr20:33584222 chr20:33584223 synonymous SNV . 0 22 hPsi_associated_SNPs_19292 0 0 0 0 1 chromatin 0.438718592968449 0.438718593223054 0.6319685 0 hPsi_site_13016 iPseU_CNN:0.6319685;iRNA_PseU:0 13017 chr17 42249679 42249679 1 + G A KIRC 42249678 + 42249658 42249698 41 CTGCACGATCCCCGAGTCCTTGCAGTAGGTGCCTGGGGGCT CTGCACGATCCCCGAGTCCTTACAGTAGGTGCCTGGGGGCT < 41bp 0.495720763505419 0.870863099064633 0.3515721 0.69293284 prediction 0.741726198129266 Functional Gain - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42249678 chr17:42249679 synonymous SNV . 0 22 hPsi_associated_SNPs_19293 0 0 0 3 1 Nucleus 0.438718592986457 0.438715816015385 0.38586568 0 hPsi_site_13017 iPseU_CNN:0.38586568;iRNA_PseU:0 13018 chr9 131186491 131186491 1 + G A UCEC 131186490 + 131186470 131186510 41 GGGGCAGGGGCTTCCAGTGGTGGCCCCAATGCTGGACTCCC GGGGCAGGGGCTTCCAGTGGTAGCCCCAATGCTGGACTCCC < 41bp 0.492572164875989 0.870854304184899 0.25059414 0.6683857 prediction 0.741708608369799 Functional Gain - CERCAM ENSG00000167123 CDS Human protein_coding chr9:131186490 chr9:131186491 synonymous SNV . 0 22 hPsi_associated_SNPs_19294 0 0 0 0 2 chromatin 0.438719092580384 0.438718592995102 0.3367714 0 hPsi_site_13018 iPseU_CNN:0.3367714;iRNA_PseU:0 13019 chr17 7479928 7479928 1 + G A OV 7479927 + 7479907 7479947 41 CACCAACGTGCGTGCTGAGGTGCAGAAACTGCAGATGGAAG CACCAACGTGCGTGCTGAGGTACAGAAACTGCAGATGGAAG < 41bp 0.489081954902544 0.870845277450575 0.33177763 0.83195037 prediction 0.74169055490115 Functional Gain - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479927 chr17:7479928 synonymous SNV . 0 22 hPsi_associated_SNPs_19295 0 0 1 0 2 Cytosol 0.438718588517169 0.43871790759401 0.66390074 0 hPsi_site_13019 iPseU_CNN:0.66390074;iRNA_PseU:0 13020 chr15 66618548 66618548 1 + G A BLCA 66618547 + 66618527 66618567 41 GAAGTCCACGAGACAGTGGCTGAATGCATGATCCTGGCCAA GAAGTCCACGAGACAGTGGCTAAATGCATGATCCTGGCCAA < 41bp 0.497303919586742 0.870785859968177 0.52270275 0.7011191 prediction 0.741571719936353 Functional Gain - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66618547 chr15:66618548 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_19296 0 0 1 0 0 chromatin 0.438729109638215 0.43871847920935 0.3568327 0 hPsi_site_13020 iPseU_CNN:0.3568327;iRNA_PseU:0 13021 chr12 57389326 57389326 1 + G A KIRP 57389325 + 57389305 57389345 41 GTCTCTGCCCGTGTGGATGCTGGAGGTCACGCTGGACTACA GTCTCTGCCCGTGTGGATGCTAGAGGTCACGCTGGACTACA < 41bp 0.504142667955753 0.874923692367487 0.24018466 0.61933815 prediction 0.741562048823468 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389325 chr12:57389326 synonymous SNV . 0 22 hPsi_associated_SNPs_19297 0 0 0 0 0 nucleus 0.438729410711272 0.438718560347722 0.2386763 0 hPsi_site_13021 iPseU_CNN:0.2386763;iRNA_PseU:0 13022 chr22 31266547 31266547 1 + G A UCEC 31266546 + 31266526 31266566 41 CTCATCGCCAAGCACGGCGCTGCACTCCAGCGCTCCCTGAC CTCATCGCCAAGCACGGCGCTACACTCCAGCGCTCCCTGAC < 41bp 0.514490663773612 0.88526163359051 0.54566854 0.8657079 prediction 0.741541939633796 Functional Gain - OSBP2 ENSG00000184792 CDS Human protein_coding chr22:31266546 chr22:31266547 nonsynonymous SNV 0.769 3 22 hPsi_associated_SNPs_19298 0 0 1 0 0 Cytosol 0.438876928055336 0.440137706366975 0.64007872 0 hPsi_site_13022 iPseU_CNN:0.64007872;iRNA_PseU:0 13023 chr19 49407615 49407615 1 + G A UCEC 49407614 + 49407594 49407634 41 GTTGCCTCAGGACACAGGCCTGTACTACCACCGGTACCTCC GTTGCCTCAGGACACAGGCCTATACTACCACCGGTACCTCC < 41bp 0.502608235752033 0.873329708685435 0.19290927 0.38364172 prediction 0.741442945866804 Functional Gain - NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49407614 chr19:49407615 synonymous SNV . 0 22 hPsi_associated_SNPs_19299 0 0 1 0 2 Ribosome 0.438723071700722 0.438719230212624 0 0 hPsi_site_13023 iPseU_CNN:0;iRNA_PseU:0 13024 chr7 7625343 7625343 1 + G A LGG 7625342 + 7625322 7625362 41 GAACTCCCTTTGGAGAGAAATGTGTAGCACACTGCGATTAC GAACTCCCTTTGGAGAGAAATATGTAGCACACTGCGATTAC < 41bp 0.498604466676846 0.870697996717745 0.3242171 0.3719859 prediction 0.74139599343549 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7625342 chr7:7625343 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_19300 0 0 1 0 1 Nucleus 0.438387417874321 0.442484136817487 0 0 hPsi_site_13024 iPseU_CNN:0;iRNA_PseU:0 13025 chrX 48650486 48650486 1 + G A UCEC 48650485 + 48650465 48650505 41 CCTGACCCTGGGACCTGCACTGCCTTCATCACTCCCTGTCC CCTGACCCTGGGACCTGCACTACCTTCATCACTCCCTGTCC < 41bp 0.491715843716993 0.870685390207785 0.17389625 0.66519755 prediction 0.74137078041557 Functional Gain - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48650485 chrX:48650486 synonymous SNV . 0 22 hPsi_associated_SNPs_19301 0 0 0 0 0 Cytosol 0.438723831295905 0.438723805675168 0.3303951 0 hPsi_site_13025 iPseU_CNN:0.3303951;iRNA_PseU:0 13026 chr16 58019375 58019375 1 + G A CHOL 58019374 + 58019354 58019394 41 CACCGCGCCCCTATCCCTGCTGCCCGCCTCAGTACTGCCTC CACCGCGCCCCTATCCCTGCTACCCGCCTCAGTACTGCCTC < 41bp 0.492621695362576 0.870680815550683 0.28699696 0.5277042 prediction 0.741361631101365 Functional Gain - TEPP ENSG00000159648 CDS Human protein_coding chr16:58019374 chr16:58019375 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_19302 0 0 0 0 2 exosome 0.437910703304619 0.4383259567087 0.0554083999999999 0 hPsi_site_13026 iPseU_CNN:0.0554083999999999;iRNA_PseU:0 13027 chr1 37941218 37941218 1 + G A BLCA 37941217 + 37941197 37941237 41 CCGGGTCAAGAGCTGGCCGCTGAGGAGGCCTCGGCCCTGGA CCGGGTCAAGAGCTGGCCGCTAAGGAGGCCTCGGCCCTGGA < 41bp 0.501530821078692 0.872169988197569 0.29054037 0.37486887 prediction 0.741278334237752 Functional Gain - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37941217 chr1:37941218 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19303 0 0 0 0 0 Nucleus 0.438718592144818 0.438718592990139 0 0 hPsi_site_13027 iPseU_CNN:0;iRNA_PseU:0 13028 chr1 111861798 111861798 1 + G A UCEC 111861797 + 111861777 111861817 41 ATGGGATGCCCCTCAGGAAGTGCCTTATGCCTATCAGGGCA ATGGGATGCCCCTCAGGAAGTACCTTATGCCTATCAGGGCA < 41bp 0.496363287371775 0.870611286771607 0.32351482 0.5364691 prediction 0.741222573543214 Functional Gain - CHIA ENSG00000134216 CDS Human protein_coding chr1:111861797 chr1:111861798 synonymous SNV . 0 22 hPsi_associated_SNPs_19304 0 0 0 0 2 exosome 0.438718597028494 0.438718609362311 0.0729382000000001 0 hPsi_site_13028 iPseU_CNN:0.0729382000000001;iRNA_PseU:0 13029 chr7 54617593 54617593 1 + G A SKCM 54617592 + 54617572 54617612 41 TCCAAAGTGAGGAAAAAGGATGAAGGCTTATATGAGTGCAG TCCAAAGTGAGGAAAAAGGATAAAGGCTTATATGAGTGCAG < 41bp 0.500380899834073 0.870986988927189 0.29109216 0.674323 prediction 0.741212178186232 Functional Gain - VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54617592 chr7:54617593 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19305 0 0 0 0 1 exosome 0.438718578258337 0.438446211592067 0.348646 0 hPsi_site_13029 iPseU_CNN:0.348646;iRNA_PseU:0 13030 chr17 7751781 7751781 1 + G A SKCM 7751780 + 7751760 7751800 41 CGTGGCCCCCCAACCCCCGCTGAAGGAGCCCTTTGCATCTC CGTGGCCCCCCAACCCCCGCTAAAGGAGCCCTTTGCATCTC < 41bp 0.505962917931174 0.876557719088138 0.2807109 0.33146062 prediction 0.741189602313929 Functional Gain - KDM6B ENSG00000132510 CDS Human protein_coding chr17:7751780 chr17:7751781 synonymous SNV . 0 22 hPsi_associated_SNPs_19306 0 0 0 0 0 Cytosol 0.43871907264618 0.438718632977039 0 0 hPsi_site_13030 iPseU_CNN:0;iRNA_PseU:0 13031 chr17 7250507 7250507 1 + G A KIRP 7250506 + 7250486 7250526 41 GCCGGGAGCCAGCCCCGGAGTGGGCCAGCATCAACCTTGGT GCCGGGAGCCAGCCCCGGAGTAGGCCAGCATCAACCTTGGT < 41bp 0.490111250266401 0.870580637001062 0.27081507 0.4898913 prediction 0.741161274002124 Functional Gain - ACAP1 ENSG00000072818 CDS Human protein_coding chr17:7250506 chr17:7250507 stopgain 1.000 1 22 hPsi_associated_SNPs_19307 0 0 0 0 1 nucleus 0.438718637426692 0.438663605765946 0 0 hPsi_site_13031 iPseU_CNN:0;iRNA_PseU:0 13032 chr1 175105027 175105027 1 + G A LUAD 175105026 + 175105006 175105046 41 AGCTGGATTTCTTCAAGCGATGGAGGAGCTATGTGGAAGGC AGCTGGATTTCTTCAAGCGATAGAGGAGCTATGTGGAAGGC < 41bp 0.499538123090502 0.870574276236244 0.27228844 0.31357616 prediction 0.741148552472488 Functional Gain - TNN ENSG00000120332 CDS Human protein_coding chr1:175105026 chr1:175105027 stopgain 0.997 1 22 hPsi_associated_SNPs_19308 0 0 0 0 2 exosome 0.438718481790044 0.438720701009341 0 0 hPsi_site_13032 iPseU_CNN:0;iRNA_PseU:0 13033 chr4 1369191 1369191 1 + G A COAD 1369190 + 1369170 1369210 41 AGAAAGACACAGTTGTGCGGTGCTTGCGGACGAGGACGAGG AGAAAGACACAGTTGTGCGGTACTTGCGGACGAGGACGAGG < 41bp 0.508559829842425 0.879075597478768 0.3738395 0.8677748 prediction 0.741031535272686 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1369190 chr4:1369191 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19309 0 0 0 0 1 Nucleus 0.438718592997947 0.438718592995321 0.7355496 0 hPsi_site_13033 iPseU_CNN:0.7355496;iRNA_PseU:0 13034 chr16 2569352 2569352 1 + G A OV 2569351 + 2569331 2569371 41 CATCGCCATCTACGGCCTGGTGGTGGCAGTCCTCATCGCCA CATCGCCATCTACGGCCTGGTAGTGGCAGTCCTCATCGCCA < 41bp 0.494757223975669 0.870514126001833 0.18386936 0.6789436 prediction 0.741028252003666 Functional Gain - ATP6V0C ENSG00000185883;ENSG00000260272 CDS Human other chr16:2569351 chr16:2569352 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19310 0 0 1 0 1 Endoplasmic reticulum 0.438591884472079 0.438717885511714 0.3578872 0 hPsi_site_13034 iPseU_CNN:0.3578872;iRNA_PseU:0 13035 chr1 203472086 203472086 1 + G A UCEC 203472085 + 203472065 203472105 41 TTACCTGTCAGACAACCTGCTGGATTCTATCCCGGGGCCTT TTACCTGTCAGACAACCTGCTAGATTCTATCCCGGGGCCTT < 41bp 0.510709571233266 0.881221354294848 0.33739167 0.6102279 prediction 0.741023566123163 Functional Gain - OPTC ENSG00000188770 CDS Human protein_coding chr1:203472085 chr1:203472086 synonymous SNV . 0 22 hPsi_associated_SNPs_19311 0 0 0 0 2 unknown 0.43875055013735 0.438718611196342 0.2204558 0 hPsi_site_13035 iPseU_CNN:0.2204558;iRNA_PseU:0 13036 chr4 515677 515677 1 + G A rs138569779 515676 + 515656 515696 41 CTGGCCTCGGCGCTGCTGTGTGTGATTGTGTCTGTTCTGAC CTGGCCTCGGCGCTGCTGTGTATGATTGTGTCTGTTCTGAC < 41bp 0.486587756410068 0.870499508746276 0.53986025 0.707718 prediction 0.740999017492552 Functional Gain - PIGG ENSG00000174227 CDS Human protein_coding chr4:515676 chr4:515677 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_19312 0 0 1 1 1 Nucleus 0.438711315684772 0.438705989571762 0.3357155 0 hPsi_site_13036 iPseU_CNN:0.3357155;iRNA_PseU:0 13037 chr19 39868169 39868169 1 + G A BLCA 39868168 + 39868148 39868188 41 ACGAAACGCTCTGCAGGAGCTGCAGCAGATCATCATCACTC ACGAAACGCTCTGCAGGAGCTACAGCAGATCATCATCACTC < 41bp 0.489097292175101 0.870483577606629 0.33570284 0.45484203 prediction 0.740967155213257 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868168 chr19:39868169 synonymous SNV . 0 22 hPsi_associated_SNPs_19313 0 0 1 0 1 Ribosome 0.438758863330785 0.438695887244684 0 0 hPsi_site_13037 iPseU_CNN:0;iRNA_PseU:0 13038 chr17 7360018 7360018 1 + G A UCEC 7360017 + 7359997 7360037 41 CCTGGACGCCACGTACCACTTGCCCCCTCCAGACCCCTTTC CCTGGACGCCACGTACCACTTACCCCCTCCAGACCCCTTTC < 41bp 0.500842319111112 0.871322825406936 0.23489329 0.7078974 prediction 0.740961012591649 Functional Gain - CHRNB1 ENSG00000170175 CDS Human protein_coding chr17:7360017 chr17:7360018 synonymous SNV . 0 22 hPsi_associated_SNPs_19314 0 0 0 0 0 chromatin 0.438719921147185 0.438732606206368 0.4157948 0 hPsi_site_13038 iPseU_CNN:0.4157948;iRNA_PseU:0 13039 chrX 51640678 51640678 1 + G A LUSC 51640677 + 51640657 51640697 41 ATCATCCGTGAATACACTGATGTTTATCCAGAAATCATTGA ATCATCCGTGAATACACTGATATTTATCCAGAAATCATTGA < 41bp 0.501667255252604 0.872088157701809 0.29401606 0.31915364 prediction 0.74084180489841 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640677 chrX:51640678 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19315 0 0 0 0 2 chromatin 0.438780500028412 0.438721906787149 0 0 hPsi_site_13039 iPseU_CNN:0;iRNA_PseU:0 13040 chr10 8100361 8100361 1 + G A SKCM 8100360 + 8100340 8100380 41 GCCACCACACCGCCTCCCCCTGGAATCTCAGCCCCTTCTCC GCCACCACACCGCCTCCCCCTAGAATCTCAGCCCCTTCTCC < 41bp 0.493901577793877 0.870418684269107 0.31378567 0.35062912 prediction 0.740837368538214 Functional Gain - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8100360 chr10:8100361 stopgain 1.000 1 22 hPsi_associated_SNPs_19316 0 0 0 0 1 Cytosol 0.438718593047282 0.438718592995113 0 0 hPsi_site_13040 iPseU_CNN:0;iRNA_PseU:0 13041 chr16 2027386 2027386 1 + G A SKCM 2027385 + 2027365 2027405 41 GGGGCACGATGCTTCTGTGCTGAAGGTGGCCTTTGTGAGCC GGGGCACGATGCTTCTGTGCTAAAGGTGGCCTTTGTGAGCC < 41bp 0.507999055746063 0.878374492803007 0.28644925 0.34169668 prediction 0.740750874113888 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2027385 chr16:2027386 synonymous SNV . 0 22 hPsi_associated_SNPs_19317 0 0 1 0 2 Nucleus 0.43872292115059 0.438714599146596 0 0 hPsi_site_13041 iPseU_CNN:0;iRNA_PseU:0 13042 chr15 42138928 42138928 1 + G A LUSC 42138927 + 42138907 42138947 41 GGAGCCCCACCTGTGCCTGCTGGATGTTGGCTACCTCATCA GGAGCCCCACCTGTGCCTGCTAGATGTTGGCTACCTCATCA < 41bp 0.486358476993146 0.870359825338219 0.21792886 0.2995739 prediction 0.740719650676438 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42138927 chr15:42138928 synonymous SNV . 0 22 hPsi_associated_SNPs_19318 0 0 0 0 1 unknown 0.438718604749375 0.437915401878537 0 0 hPsi_site_13042 iPseU_CNN:0;iRNA_PseU:0 13043 chr1 17603123 17603123 1 + G A BLCA 17603122 + 17603102 17603142 41 TTGGCCGTGGGCCATGTGGATGAGTTTCTGAGCTTTGTCCC TTGGCCGTGGGCCATGTGGATAAGTTTCTGAGCTTTGTCCC < 41bp 0.489335447469396 0.870352620728676 0.5143132 0.77445704 prediction 0.740705241457352 Functional Gain - PADI3 ENSG00000142619 CDS Human protein_coding chr1:17603122 chr1:17603123 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19319 0 0 0 0 1 unknown 0.438785469166003 0.438717975328295 0.52028768 0 hPsi_site_13043 iPseU_CNN:0.52028768;iRNA_PseU:0 13044 chr15 75091647 75091647 1 + G A BLCA 75091646 + 75091626 75091666 41 AAGATCACACGGGAGCAGGCTGAGCGGCTTCTGTACCCGCC AAGATCACACGGGAGCAGGCTAAGCGGCTTCTGTACCCGCC < 41bp 0.490257055740427 0.870327181504309 0.64772815 0.82627094 prediction 0.740654363008618 Functional Gain - CSK ENSG00000103653 CDS Human protein_coding chr15:75091646 chr15:75091647 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_19320 0 0 1 0 0 Ribosome 0.438718590022639 0.438718176606955 0.35708558 0 hPsi_site_13044 iPseU_CNN:0.35708558;iRNA_PseU:0 13045 chr5 180474993 180474993 1 + G A COAD 180474992 + 180474972 180475012 41 GGGAGGAGGTGGAGTTCCCGTGCCACCTATGGCCACAGCTG GGGAGGAGGTGGAGTTCCCGTACCACCTATGGCCACAGCTG < 41bp 0.508857326504698 0.879176688258617 0.34438413 0.67011184 prediction 0.740638723507837 Functional Gain - BTNL9 ENSG00000165810 CDS Human protein_coding chr5:180474992 chr5:180474993 nonsynonymous SNV 0.043 3 22 hPsi_associated_SNPs_19321 0 0 0 0 1 Cytosol 0.438718591933883 0.438718222921866 0.34022368 0 hPsi_site_13045 iPseU_CNN:0.34022368;iRNA_PseU:0 13046 chr22 50591521 50591521 1 + G A rs113994716 50591520 + 50591500 50591540 41 GTCCCACGAGGCCCTGCTGATGCTGCCCTCACGGCTGTTCT GTCCCACGAGGCCCTGCTGATACTGCCCTCACGGCTGTTCT < 41bp 0.489727318647995 0.870313402459454 0.23141125 0.29584843 prediction 0.740626804918907 Functional Gain - MOV10L1 ENSG00000073146 CDS Human protein_coding chr22:50591520 chr22:50591521 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_19322 0 0 0 0 1 exosome 0.438724277267712 0.438715872559257 0 0 hPsi_site_13046 iPseU_CNN:0;iRNA_PseU:0 13047 chr12 100795614 100795614 1 + G A COAD 100795613 + 100795593 100795633 41 GGGGTGTTGGTGCAGTACATTGGATGGTCCTCTGTCTTTTA GGGGTGTTGGTGCAGTACATTAGATGGTCCTCTGTCTTTTA < 41bp 0.49641935483019 0.870311509854904 0.32311094 0.6209929 prediction 0.740623019709807 Functional Gain - SLC17A8 ENSG00000179520 CDS Human protein_coding chr12:100795613 chr12:100795614 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19323 0 0 0 0 2 exosome 0.438718596037815 0.438718530020691 0.2419858 0 hPsi_site_13047 iPseU_CNN:0.2419858;iRNA_PseU:0 13048 chrX 153459072 153459072 1 + G A UCEC 153459071 + 153459051 153459091 41 CCACCCTTTGATGGCTGCCCTGCCGGCCTTCTTTGCCAAAA CCACCCTTTGATGGCTGCCCTACCGGCCTTCTTTGCCAAAA < 41bp 0.496051631102368 0.870258277403773 0.21578616 0.32854062 prediction 0.740516554807545 Functional Gain - OPN1MW;OPN1MW2;OPN1MW3 ENSG00000147380 CDS Human other chrX:153459071 chrX:153459072 synonymous SNV . 0 22 hPsi_associated_SNPs_19324 0 0 0 0 1 unknown 0.438719614338356 0.438721735509767 0 0 hPsi_site_13048 iPseU_CNN:0;iRNA_PseU:0 13049 chr1 2235842 2235842 1 + G A UCEC 2235841 + 2235821 2235861 41 CCCTCGGCCGTCCCTGATGCTGCGGCCCCTGCCGACGCCCC CCCTCGGCCGTCCCTGATGCTACGGCCCCTGCCGACGCCCC < 41bp 0.494881098629575 0.870235317597103 0.38885167 0.65628 prediction 0.740470635194206 Functional Gain - SKI ENSG00000157933 CDS Human protein_coding chr1:2235841 chr1:2235842 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_19325 0 0 1 0 0 Endoplasmic reticulum 0.438718289091928 0.438685837364856 0.31256 0 hPsi_site_13049 iPseU_CNN:0.31256;iRNA_PseU:0 13050 chr1 113236690 113236690 1 + G A UCEC 113236689 + 113236669 113236709 41 AGTGCTACGGGGCGACCACCTGTTTGCCCTTTTGTCCTCGG AGTGCTACGGGGCGACCACCTATTTGCCCTTTTGTCCTCGG < 41bp 0.511001691359423 0.881236063728853 0.38199723 0.66775894 prediction 0.740468744738859 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113236689 chr1:113236690 synonymous SNV . 0 22 hPsi_associated_SNPs_19326 0 0 1 0 1 Cytosol 0.438718592775955 0.43871859281248 0.33551788 0 hPsi_site_13050 iPseU_CNN:0.33551788;iRNA_PseU:0 13051 chr1 1389811 1389811 1 + G A SKCM 1389810 + 1389790 1389830 41 CCGCTACATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGA CCGCTACATCGAGGCTCGGCTAGGGAAGCCGTCCCTAGTGA < 41bp 0.49875228031366 0.870217159054929 0.36490285 0.6886779 prediction 0.740434318109858 Functional Gain - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1389810 chr1:1389811 synonymous SNV . 0 22 hPsi_associated_SNPs_19327 0 0 0 0 2 Nucleus 0.438718592995101 0.438689952659115 0.3773558 0 hPsi_site_13051 iPseU_CNN:0.3773558;iRNA_PseU:0 Height 13052 chr17 73569259 73569259 1 + G A SKCM 73569258 + 73569238 73569278 41 CAACCTGGGCGACATCCAGGTGGTCTCGCTGCCCCTGCTCA CAACCTGGGCGACATCCAGGTAGTCTCGCTGCCCCTGCTCA < 41bp 0.506913486886512 0.877130456344836 0.3226394 0.88980734 prediction 0.740433938916649 Functional Gain - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73569258 chr17:73569259 synonymous SNV . 0 22 hPsi_associated_SNPs_19328 0 0 0 0 0 Endoplasmic reticulum 0.438718606715352 0.438716815346019 0.77961468 0 hPsi_site_13052 iPseU_CNN:0.77961468;iRNA_PseU:0 13053 chr20 30070203 30070203 1 + G A LUSC 30070202 + 30070182 30070222 41 CTCTGAGCTCCGCATCCAGCTGCGGCGCACACATCAGGCAG CTCTGAGCTCCGCATCCAGCTACGGCGCACACATCAGGCAG < 41bp 0.506297402735471 0.876505631797003 0.20948464 0.37527245 prediction 0.740416458123063 Functional Gain - REM1 ENSG00000088320 CDS Human protein_coding chr20:30070202 chr20:30070203 synonymous SNV . 0 22 hPsi_associated_SNPs_19329 0 0 0 0 1 exosome 0.437762999336051 0.429475763229903 0 0 hPsi_site_13053 iPseU_CNN:0;iRNA_PseU:0 13054 chr2 220474173 220474173 1 + G A rs149600925 220474172 + 220474152 220474192 41 TCCTGCTGGGTAGATTCCAGTGTCTACGCTGTGGCCATGAG TCCTGCTGGGTAGATTCCAGTATCTACGCTGTGGCCATGAG < 41bp 0.48343946263309 0.870206662419136 0.2497879 0.63464534 prediction 0.740413324838272 Functional Gain - STK11IP ENSG00000144589 CDS Human protein_coding chr2:220474172 chr2:220474173 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_19330 0 0 1 1 2 chromatin 0.438734070683489 0.438718645491511 0.26929068 0 hPsi_site_13054 iPseU_CNN:0.26929068;iRNA_PseU:0 13055 chr3 127327821 127327821 1 + G A CESC 127327820 + 127327800 127327840 41 GGAACTGACCGATGAAGATGTGAAGATGATCACTAGCCTCT GGAACTGACCGATGAAGATGTAAAGATGATCACTAGCCTCT < 41bp 0.484097356306569 0.870197780992486 0.39090338 0.6247117 prediction 0.740395561984972 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127327820 chr3:127327821 synonymous SNV . 0 22 hPsi_associated_SNPs_19331 0 0 1 0 1 Cytosol 0.438719392018434 0.438721347083518 0.2494234 0 hPsi_site_13055 iPseU_CNN:0.2494234;iRNA_PseU:0 13056 chr11 120998800 120998800 1 + G A UCEC 120998799 + 120998779 120998819 41 TGGAGGACGGCTACCAGGGCTGCTTCCCCAAGCGGGAGACC TGGAGGACGGCTACCAGGGCTACTTCCCCAAGCGGGAGACC < 41bp 0.505808276259606 0.875999691608363 0.4295358 0.68078995 prediction 0.740382830697514 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:120998799 chr11:120998800 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19332 0 0 0 0 0 exosome 0.438718305947634 0.438691607202855 0.3615799 0 hPsi_site_13056 iPseU_CNN:0.3615799;iRNA_PseU:0 13057 chr13 51826273 51826273 1 + G A UCEC 51826272 + 51826252 51826292 41 TGCCTCTCCTGCCCAACCCTTGCAGCCCCATCAGCGAGGGG TGCCTCTCCTGCCCAACCCTTACAGCCCCATCAGCGAGGGG < 41bp 0.507473628380338 0.877659492458196 0.535022 0.7087265 prediction 0.740371728155717 Functional Gain - FAM124A ENSG00000150510 CDS Human protein_coding chr13:51826272 chr13:51826273 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19333 0 0 1 0 1 exosome 0.438718592995575 0.438718592490739 0.347409 0 hPsi_site_13057 iPseU_CNN:0.347409;iRNA_PseU:0 13058 chr16 70688521 70688521 1 + G A UCEC 70688520 + 70688500 70688540 41 ACGCAGAATGAGGAGTGCACTGTCACGGGTTTTCTGCGGGA ACGCAGAATGAGGAGTGCACTATCACGGGTTTTCTGCGGGA < 41bp 0.496652690919043 0.870181572026519 0.28308904 0.46353948 prediction 0.740363144053039 Functional Gain - IL34 ENSG00000157368 CDS Human protein_coding chr16:70688520 chr16:70688521 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_19334 0 0 0 0 2 exosome 0.438700485383841 0.438703824492308 0 0 hPsi_site_13058 iPseU_CNN:0;iRNA_PseU:0 13059 chr17 70119832 70119832 1 + G A BLCA 70119831 + 70119811 70119851 41 CGACGTGGACATCGGCGAGCTGAGCAGCGACGTCATCTCCA CGACGTGGACATCGGCGAGCTAAGCAGCGACGTCATCTCCA < 41bp 0.504714361874556 0.874887976604493 0.2988621 0.81158113 prediction 0.740347229459874 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119831 chr17:70119832 synonymous SNV . 0 22 hPsi_associated_SNPs_19335 0 0 1 0 0 Cytosol 0.439036949661077 0.439551201216757 0.62316226 0 hPsi_site_13059 iPseU_CNN:0.62316226;iRNA_PseU:0 13060 chr5 176859274 176859274 1 + G A COAD 176859273 + 176859253 176859293 41 CGGATGACAAGCGGAAGGCATGTGGGCGGCAGCTAACGCAG CGGATGACAAGCGGAAGGCATATGGGCGGCAGCTAACGCAG < 41bp 0.491879264793764 0.870136660282218 0.3207736 0.50537 prediction 0.740273320564436 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176859273 chr5:176859274 nonsynonymous SNV 0.933 2 22 hPsi_associated_SNPs_19336 0 0 1 0 2 Cytosol 0.438718581451552 0.438718610842139 0.01074 0 hPsi_site_13060 iPseU_CNN:0.01074;iRNA_PseU:0 13061 chr16 731466 731466 1 + G A CESC 731465 + 731445 731485 41 CCTGGCCAAGGAGCAGCGGCTGAACTTCGGGGACGACATCC CCTGGCCAAGGAGCAGCGGCTAAACTTCGGGGACGACATCC < 41bp 0.499411302406076 0.870090517737432 0.32109416 0.6247085 prediction 0.740181035474865 Functional Gain - STUB1 ENSG00000103266 CDS Human protein_coding chr16:731465 chr16:731466 synonymous SNV . 0 22 hPsi_associated_SNPs_19337 0 0 1 0 1 Endoplasmic reticulum 0.438718408309098 0.438677640865755 0.249417 0 hPsi_site_13061 iPseU_CNN:0.249417;iRNA_PseU:0 13062 chr11 65346881 65346881 1 + G A rs79261382 65346880 + 65346860 65346900 41 GTGTGGATGGTACCTGAGAATGTGGACATCTCTGTGACCCT GTGTGGATGGTACCTGAGAATATGGACATCTCTGTGACCCT < 41bp 0.498000711153588 0.87009016396826 0.2594525 0.5486972 prediction 0.74018032793652 Functional Gain - EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65346880 chr11:65346881 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19338 0 0 1 0 1 chromatin 0.43871860615269 0.438718594886689 0.0973944 0 hPsi_site_13062 iPseU_CNN:0.0973944;iRNA_PseU:0 13063 chr11 113233185 113233185 1 + G A LGG 113233184 + 113233164 113233204 41 GAAAATTGTTGAGGAGGCCTTGCGAGCAGGAGTGGTAAAGA GAAAATTGTTGAGGAGGCCTTACGAGCAGGAGTGGTAAAGA < 41bp 0.491746908701997 0.870058131631069 0.23462364 0.6883206 prediction 0.740116263262137 Functional Gain - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113233184 chr11:113233185 synonymous SNV . 0 22 hPsi_associated_SNPs_19339 0 0 0 0 2 cytosol 0.438718507886067 0.438718585156784 0.3766412 0 hPsi_site_13063 iPseU_CNN:0.3766412;iRNA_PseU:0 13064 chr9 33796723 33796723 1 + G A HNSC 33796722 + 33796702 33796742 41 TCTCCCCTACCAGGTGTCCCTGAATTCTGGCTCCCACTTCT TCTCCCCTACCAGGTGTCCCTAAATTCTGGCTCCCACTTCT < 41bp 0.508666028728331 0.878715674530929 0.3438524 0.48590806 prediction 0.740099291605195 Functional Gain - PRSS3 ENSG00000010438 CDS Human protein_coding chr9:33796722 chr9:33796723 synonymous SNV . 0 22 hPsi_associated_SNPs_19340 0 0 0 0 2 Ribosome 0.438689688032224 0.43892657703514 0 0 hPsi_site_13064 iPseU_CNN:0;iRNA_PseU:0 13065 chr2 85857963 85857963 1 + G A BLCA 85857962 + 85857942 85857982 41 CCAGCGTTTTGGAGAGCTGATGAGAAAGCTCTGGAACCCTC CCAGCGTTTTGGAGAGCTGATAAGAAAGCTCTGGAACCCTC < 41bp 0.495078475605514 0.870032108374317 0.22030085 0.31682825 prediction 0.740064216748633 Functional Gain - USP39 ENSG00000168883 CDS Human protein_coding chr2:85857962 chr2:85857963 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19341 0 0 1 0 0 Cytosol 0.438718589937646 0.438718557467086 0 0 hPsi_site_13065 iPseU_CNN:0;iRNA_PseU:0 13066 chr12 112583428 112583428 1 + G A BRCA 112583427 + 112583407 112583447 41 ATGTTGCCTTGTGAATTTTGTGAGGAGCTCTACCCAGAGGA ATGTTGCCTTGTGAATTTTGTAAGGAGCTCTACCCAGAGGA < 41bp 0.488323967158621 0.869987766523457 0.46977538 0.77086437 prediction 0.739975533046914 Functional Gain - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112583427 chr12:112583428 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19342 0 0 1 2 2 Cytosol 0.438717615525788 0.438718588348852 0.54172874 0 hPsi_site_13066 iPseU_CNN:0.54172874;iRNA_PseU:0 13067 chr22 40351880 40351880 1 + G A UCEC 40351879 + 40351859 40351899 41 CTTGGGAGCCAGGAAGGATATGTGCCCAAGAATTTCATAGA CTTGGGAGCCAGGAAGGATATATGCCCAAGAATTTCATAGA < 41bp 0.498363400382072 0.869981807878434 0.6964529 0.67563117 prediction 0.739963615756869 Functional Gain - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40351879 chr22:40351880 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19343 0 0 1 0 2 chromatin 0.438718592995064 0.438718592995151 0 0 hPsi_site_13067 iPseU_CNN:0;iRNA_PseU:0 13068 chr9 100234646 100234646 1 + G A UCEC 100234645 + 100234625 100234665 41 TTAACTTGTGGAAAGATCTTTGCAGTGGAAATACTTGACAA TTAACTTGTGGAAAGATCTTTACAGTGGAAATACTTGACAA < 41bp 0.499103324613595 0.869959201460117 0.26923066 0.6123524 prediction 0.739918402920234 Functional Gain - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100234645 chr9:100234646 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19344 0 0 0 0 1 Ribosome 0.438403574439875 0.438691035737081 0.2247048 0 hPsi_site_13068 iPseU_CNN:0.2247048;iRNA_PseU:0 13069 chr1 1426036 1426036 1 + G A rs181699683 1426035 + 1426015 1426055 41 GGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGTGA GGGCCGGGAGATCGCTCAGCTAGCCGTGTCCTGGCAGGTGA < 41bp 0.500080349454733 0.869989478697898 0.17818531 0.30188328 prediction 0.73981825848633 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1426035 chr1:1426036 synonymous SNV . 0 22 hPsi_associated_SNPs_19345 0 0 1 0 2 Ribosome 0.438778728548839 0.438759578950575 0 0 hPsi_site_13069 iPseU_CNN:0;iRNA_PseU:0 13070 chr22 31597525 31597525 1 + G A UCEC 31597524 + 31597504 31597544 41 TGGAGATGGTGGCTTCCAGATGTCTTTTGGAATTGGGGCAT TGGAGATGGTGGCTTCCAGATATCTTTTGGAATTGGGGCAT < 41bp 0.492988290777517 0.869893779786648 0.25991696 0.31462833 prediction 0.739787559573296 Functional Gain - RNF185 ENSG00000138942 CDS Human protein_coding chr22:31597524 chr22:31597525 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19346 0 0 0 0 2 Ribosome 0.43995552357243 0.459192890031265 0 0 hPsi_site_13070 iPseU_CNN:0;iRNA_PseU:0 13071 chr17 27061104 27061104 1 + G A CESC 27061103 + 27061083 27061123 41 GAGCGGCAGGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCT GAGCGGCAGGCAGCCCAGAATAAGTGCCAGGTCCTCAAGCT < 41bp 0.503468817160487 0.873357945813694 0.3194415 0.56872183 prediction 0.739778257306414 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27061103 chr17:27061104 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19347 0 0 1 0 0 Nucleus 0.438710956839338 0.43872429178413 0.13744366 0 hPsi_site_13071 iPseU_CNN:0.13744366;iRNA_PseU:0 13072 chr5 176862065 176862065 1 + G A rs143935970 176862064 + 176862044 176862084 41 ATCTCTGACCTGGGACTAGCTGTGCATGTGCCCGAGGGCCA ATCTCTGACCTGGGACTAGCTATGCATGTGCCCGAGGGCCA < 41bp 0.482233158118344 0.869877747569276 0.2340928 0.3422143 prediction 0.739755495138551 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176862064 chr5:176862065 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_19348 0 0 1 0 2 Cytosol 0.438698847834462 0.438791024488632 0 0 hPsi_site_13072 iPseU_CNN:0;iRNA_PseU:0 13073 chr20 31656701 31656701 1 + G A SKCM 31656700 + 31656680 31656720 41 ACTCCACAACAAGAAGGCCTTGGTCTCCCTCCCAGCCAACA ACTCCACAACAAGAAGGCCTTAGTCTCCCTCCCAGCCAACA < 41bp 0.50844308905527 0.878308212403397 0.32037827 0.501805 prediction 0.739730246696255 Functional Gain - BPIFB3 ENSG00000186190 CDS Human protein_coding chr20:31656700 chr20:31656701 synonymous SNV . 0 22 hPsi_associated_SNPs_19349 0 0 0 0 2 exosome 0.438718442640348 0.43871864717627 0.00360999999999989 0 hPsi_site_13073 iPseU_CNN:0.00360999999999989;iRNA_PseU:0 Progressive Supranuclear Palsy 13074 chr19 48879425 48879425 1 + G A LIHC 48879424 + 48879404 48879444 41 CTTCCTGGATGAGGGTGGCATGGTGCTGACCACCCTCCCCT CTTCCTGGATGAGGGTGGCATAGTGCTGACCACCCTCCCCT < 41bp 0.499723883356849 0.869852988155926 0.19836998 0.33831796 prediction 0.739705976311853 Functional Gain - SYNGR4 ENSG00000105467 CDS Human protein_coding chr19:48879424 chr19:48879425 nonsynonymous SNV 0.799 1 22 hPsi_associated_SNPs_19350 0 0 0 0 1 exosome 0.438718592998966 0.438718592994972 0 0 hPsi_site_13074 iPseU_CNN:0;iRNA_PseU:0 13075 chr14 103371998 103371998 1 + G A STAD 103371997 + 103371977 103372017 41 CAAGAAGCCCACTGGAGAGATGAATATCGCCTCTGGCTGCC CAAGAAGCCCACTGGAGAGATAAATATCGCCTCTGGCTGCC < 41bp 0.503754149733235 0.873602242793674 0.32262656 0.3881194 prediction 0.739696186120878 Functional Gain - TRAF3 ENSG00000131323 CDS Human protein_coding chr14:103371997 chr14:103371998 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_19351 0 0 1 0 0 Cytosol 0.438485643301923 0.4387177552363 0 0 hPsi_site_13075 iPseU_CNN:0;iRNA_PseU:0 13076 chr1 150064444 150064444 1 + G A BLCA 150064443 + 150064423 150064463 41 GGTAAACGAGTCAGAGGAAGTGACCTCTTCAGCCCCAAAGA GGTAAACGAGTCAGAGGAAGTAACCTCTTCAGCCCCAAAGA < 41bp 0.503223202931516 0.873064911194744 0.23556274 0.36664462 prediction 0.739683416526457 Functional Gain - VPS45 ENSG00000136631 CDS Human protein_coding chr1:150064443 chr1:150064444 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19352 0 0 1 1 2 Nucleus 0.438718592995717 0.438718592995102 0 0 hPsi_site_13076 iPseU_CNN:0;iRNA_PseU:0 13077 chr2 242690717 242690717 1 + G A BLCA 242690716 + 242690696 242690736 41 TCCAACGCAGGCCATGACGCTGAGAAGCTGGGCCACTTCCT TCCAACGCAGGCCATGACGCTAAGAAGCTGGGCCACTTCCT < 41bp 0.505382382383558 0.87522298215082 0.24833587 0.28454745 prediction 0.739681199534525 Functional Gain - D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242690716 chr2:242690717 nonsynonymous SNV 0.733 2 22 hPsi_associated_SNPs_19353 0 0 1 0 2 Ribosome 0.439935306741659 0.435101863286862 0 0 hPsi_site_13077 iPseU_CNN:0;iRNA_PseU:0 13078 chr12 122618182 122618182 1 + G A BLCA 122618181 + 122618161 122618201 41 TCCTCCTCCTGCCACTGCCCTGAACCCCCCGGCTCCACCCA TCCTCCTCCTGCCACTGCCCTAAACCCCCCGGCTCCACCCA < 41bp 0.481790473965674 0.869832552362182 0.24255955 0.42904606 prediction 0.739665104724365 Functional Gain - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122618181 chr12:122618182 synonymous SNV . 0 22 hPsi_associated_SNPs_19354 0 0 1 0 0 chromatin 0.438718992179607 0.438718592950173 0 0 hPsi_site_13078 iPseU_CNN:0;iRNA_PseU:0 13079 chr7 75517556 75517556 1 + G A LUAD 75517555 + 75517535 75517575 41 AGCTTCTGCGGGCACCTCCCTGGGCATCCAGCCCCCCACGC AGCTTCTGCGGGCACCTCCCTAGGCATCCAGCCCCCCACGC < 41bp 0.506242901191229 0.876065320027034 0.36343586 0.79249704 prediction 0.739644837671609 Functional Gain - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517555 chr7:75517556 synonymous SNV . 0 22 hPsi_associated_SNPs_19355 0 0 1 0 0 Endoplasmic reticulum 0.438705864100894 0.438718545038688 0.58499408 0 hPsi_site_13079 iPseU_CNN:0.58499408;iRNA_PseU:0 13080 chr15 32450652 32450652 1 + G A LIHC 32450651 + 32450631 32450671 41 GTGAAAGGTTCTATGAGTGCTGCAAAGAGCCCTACCCCGAT GTGAAAGGTTCTATGAGTGCTACAAAGAGCCCTACCCCGAT < 41bp 0.49583210233129 0.869778396795117 0.26318043 0.4299636 prediction 0.739556793590235 Functional Gain - CHRNA7 ENSG00000175344 CDS Human protein_coding chr15:32450651 chr15:32450652 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19356 0 0 0 0 1 Nucleus 0.438420445838383 0.438721368636694 0 0 hPsi_site_13080 iPseU_CNN:0;iRNA_PseU:0 13081 chr3 128979543 128979543 1 + G A LUSC 128979542 + 128979522 128979562 41 ACAGATTCAAACCGCAGCATTGCCACGCTGGCCATCACCAC ACAGATTCAAACCGCAGCATTACCACGCTGGCCATCACCAC < 41bp 0.513548823949549 0.883326745805048 0.21177778 0.27751523 prediction 0.739555843710998 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128979542 chr3:128979543 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_19357 0 0 1 0 1 Nucleus 0.438711708435649 0.438332000106452 0 0 hPsi_site_13081 iPseU_CNN:0;iRNA_PseU:0 13082 chr5 133914837 133914837 1 + G A UCEC 133914836 + 133914816 133914856 41 GGGATGGGACCACCTTCAGCTGTGGCTGAGAGGCCCAAGGT GGGATGGGACCACCTTCAGCTATGGCTGAGAGGCCCAAGGT < 41bp 0.498513496258235 0.869775537181781 0.20563397 0.3773362 prediction 0.739551074363563 Functional Gain - JADE2 ENSG00000043143 CDS Human protein_coding chr5:133914836 chr5:133914837 nonsynonymous SNV 0.811 0 22 hPsi_associated_SNPs_19358 0 0 0 0 0 Cytosol 0.43871859618579 0.438718671818186 0 0 hPsi_site_13082 iPseU_CNN:0;iRNA_PseU:0 13083 chr22 41077566 41077566 1 + G A LAML 41077565 + 41077545 41077585 41 AGCCGCATACGTGAGGATCCTGCAGCGCATGACGTCCTCAG AGCCGCATACGTGAGGATCCTACAGCGCATGACGTCCTCAG < 41bp 0.493214223185329 0.86976551680614 0.41237387 0.66499203 prediction 0.739531033612279 Functional Gain - MCHR1 ENSG00000128285 CDS Human protein_coding chr22:41077565 chr22:41077566 synonymous SNV . 0 22 hPsi_associated_SNPs_19359 0 0 0 0 0 exosome 0.438738592222336 0.439228959068035 0.32998406 0 hPsi_site_13083 iPseU_CNN:0.32998406;iRNA_PseU:0 13084 chr11 67201523 67201523 1 + G A LUSC 67201522 + 67201502 67201542 41 GGCCCAGGGGATGCTGCTGATGTGCAGGTGGGTTTGGGACC GGCCCAGGGGATGCTGCTGATATGCAGGTGGGTTTGGGACC < 41bp 0.496500191198018 0.869739011707378 0.24202201 0.28636515 prediction 0.739478023414755 Functional Gain - RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201522 chr11:67201523 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19360 0 0 1 0 2 Ribosome 0.438718592956542 0.438718586756681 0 0 hPsi_site_13084 iPseU_CNN:0;iRNA_PseU:0 13085 chr19 57744009 57744009 1 + G A rs55710619 57744008 + 57743988 57744028 41 GGGTGAGCTCTACAAGGAGCTGCAGAAAAGCGAGAAATTAG GGGTGAGCTCTACAAGGAGCTACAGAAAAGCGAGAAATTAG < 41bp 0.483596160191873 0.869737589627222 0.25321397 0.666982 prediction 0.739475179254445 Functional Gain - AURKC ENSG00000105146 CDS Human protein_coding chr19:57744008 chr19:57744009 synonymous SNV . 0 22 hPsi_associated_SNPs_19361 1 0 1 0 2 Cytosol 0.438718809906171 0.438718675901505 0.333964 0 hPsi_site_13085 iPseU_CNN:0.333964;iRNA_PseU:0 13086 chr2 44079606 44079606 1 + G A rs9282575 44079605 + 44079585 44079625 41 CAGGAGAGTCAGCATTGGGGTGCAGCTCCTGTGGAACCCAG CAGGAGAGTCAGCATTGGGGTACAGCTCCTGTGGAACCCAG < 41bp 0.494350674730792 0.869737077126458 0.3978247 0.7139954 prediction 0.739474154252916 Functional Gain - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44079605 chr2:44079606 synonymous SNV . 0 22 hPsi_associated_SNPs_19362 1 0 1 0 1 cytosol 0.438718592995088 0.438718592984192 0.4279908 0 hPsi_site_13086 iPseU_CNN:0.4279908;iRNA_PseU:0 13087 chr14 90650778 90650778 1 + G A LUAD 90650777 + 90650757 90650797 41 TCAGCCATGTACACCCCCATTGAAGGCTGGAGCTACTTTGA TCAGCCATGTACACCCCCATTAAAGGCTGGAGCTACTTTGA < 41bp 0.496280491207197 0.869720786712856 0.24372602 0.2863816 prediction 0.739441573425712 Functional Gain - KCNK13 ENSG00000152315 CDS Human protein_coding chr14:90650777 chr14:90650778 nonsynonymous SNV 0.267 4 22 hPsi_associated_SNPs_19363 0 0 0 0 0 exosome 0.438718906668849 0.438724304748934 0 0 hPsi_site_13087 iPseU_CNN:0;iRNA_PseU:0 13088 chr12 108589706 108589706 1 + G A LAML 108589705 + 108589685 108589725 41 TACCTGACTGCTGGGAGCCTTGTCTTCCTTCACTCTGGCTT TACCTGACTGCTGGGAGCCTTATCTTCCTTCACTCTGGCTT < 41bp 0.507953647429548 0.877670734211447 0.21251762 0.2865364 prediction 0.739434173563798 Functional Gain - WSCD2 ENSG00000075035 CDS Human protein_coding chr12:108589705 chr12:108589706 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_19364 0 0 0 0 0 Endoplasmic reticulum 0.438718412555766 0.438717818361049 0 0 hPsi_site_13088 iPseU_CNN:0;iRNA_PseU:0 13089 chr17 1782880 1782880 1 + G A CESC 1782879 + 1782859 1782899 41 ATCGGGATCTGCAAGAGCTATGAAGACGCCACTAAAATCAC ATCGGGATCTGCAAGAGCTATAAAGACGCCACTAAAATCAC < 41bp 0.499184021853199 0.869715174366255 0.28502712 0.49251446 prediction 0.739430348732511 Functional Gain - RPA1 ENSG00000132383 CDS Human protein_coding chr17:1782879 chr17:1782880 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_19365 0 0 1 0 1 chromatin 0.438743153324632 0.438718638334434 0 0 hPsi_site_13089 iPseU_CNN:0;iRNA_PseU:0 13090 chr9 104319714 104319714 1 + G A STAD 104319713 + 104319693 104319733 41 GATGTCACAGGCCAGGCCTTTGAAGACATGCAGGAGCAAAA GATGTCACAGGCCAGGCCTTTAAAGACATGCAGGAGCAAAA < 41bp 0.494747355121149 0.869705775810982 0.38260812 0.59650165 prediction 0.739411551621965 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104319713 chr9:104319714 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19366 0 0 1 0 1 nucleus 0.437742470074703 0.438718590258807 0.1930033 0 hPsi_site_13090 iPseU_CNN:0.1930033;iRNA_PseU:0 13091 chr6 47681840 47681840 1 + G A UCEC 47681839 + 47681819 47681859 41 CTAAGGAAGCTGTGGCCAAATGCATCCCAAGCCATTAGCAT CTAAGGAAGCTGTGGCCAAATACATCCCAAGCCATTAGCAT < 41bp 0.505809396486863 0.875506715195521 0.24694905 0.40247178 prediction 0.739394637417317 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47681839 chr6:47681840 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_19367 0 0 0 0 0 exosome 0.438738761442265 0.438720937530908 0 0 hPsi_site_13091 iPseU_CNN:0;iRNA_PseU:0 13092 chr18 60639837 60639837 1 + G A COAD 60639836 + 60639816 60639856 41 CGGAGACCGGAATGTGGAGGTGCCCTACCTTCTCCAGTGCA CGGAGACCGGAATGTGGAGGTACCCTACCTTCTCCAGTGCA < 41bp 0.4944365200102 0.869661000108233 0.27559686 0.84998524 prediction 0.739322000216467 Functional Gain - PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60639836 chr18:60639837 synonymous SNV . 0 22 hPsi_associated_SNPs_19368 0 0 0 0 1 Cytosol 0.438718351564058 0.438714696344173 0.69997048 0 hPsi_site_13092 iPseU_CNN:0.69997048;iRNA_PseU:0 13093 chr11 46332593 46332593 1 + G A PAAD 46332592 + 46332572 46332612 41 GCTCTCCCCAGAGGACCTGGTGCAGATGCCTCCGACGCCCC GCTCTCCCCAGAGGACCTGGTACAGATGCCTCCGACGCCCC < 41bp 0.478810566605714 0.869616042476917 0.3342281 0.8779048 prediction 0.739232084953835 Functional Gain - CREB3L1 ENSG00000157613 CDS Human protein_coding chr11:46332592 chr11:46332593 synonymous SNV . 0 22 hPsi_associated_SNPs_19369 0 0 0 0 1 Endoplasmic reticulum 0.438718593099309 0.438718244852031 0.7558096 0 hPsi_site_13093 iPseU_CNN:0.7558096;iRNA_PseU:0 Multiple complex diseases 13094 chr3 183906098 183906098 1 + G A BLCA 183906097 + 183906077 183906117 41 GAGCAAGAGGTTGCTGGAGATGACACTCCTGCCCTGCAGAG GAGCAAGAGGTTGCTGGAGATAACACTCCTGCCCTGCAGAG < 41bp 0.485943321415825 0.869610926248486 0.25385755 0.34206295 prediction 0.739221852496972 Functional Gain - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906097 chr3:183906098 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19370 0 0 1 0 1 Cytosol 0.438718557154167 0.438719691306148 0 0 hPsi_site_13094 iPseU_CNN:0;iRNA_PseU:0 13095 chr7 95157174 95157174 1 + G A LUSC 95157173 + 95157153 95157193 41 CCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCG CCAAGATGAGGAGACGCCCTTACACACGGCTGCCCACTTCG < 41bp 0.50126120835377 0.870851336325025 0.23071188 0.34781015 prediction 0.73918025594251 Functional Gain - ASB4 ENSG00000005981 CDS Human protein_coding chr7:95157173 chr7:95157174 synonymous SNV . 0 22 hPsi_associated_SNPs_19371 0 0 0 0 1 cytosol 0.438718466760051 0.438722760992429 0 0 hPsi_site_13095 iPseU_CNN:0;iRNA_PseU:0 13096 chr3 197598286 197598286 1 + G A SKCM 197598285 + 197598265 197598305 41 CTTTGCCATTTGGCCAATCATGTGCGACCTCGATCTGTCCC CTTTGCCATTTGGCCAATCATATGCGACCTCGATCTGTCCC < 41bp 0.500230530230785 0.869818347122428 0.3747099 0.36421162 prediction 0.739175633783287 Functional Gain - LRCH3 ENSG00000186001 CDS Human protein_coding chr3:197598285 chr3:197598286 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19372 0 0 1 0 2 Ribosome 0.438725728870814 0.438724366316255 0 0 hPsi_site_13096 iPseU_CNN:0;iRNA_PseU:0 13097 chr12 50488313 50488313 1 + G A UCEC 50488312 + 50488292 50488332 41 CCAGATGAATTCTTTTCTGCTGTCCACTGCCAGCCAACAGG CCAGATGAATTCTTTTCTGCTATCCACTGCCAGCCAACAGG < 41bp 0.492741513092781 0.869575663795722 0.2571897 0.40646714 prediction 0.739151327591445 Functional Gain - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50488312 chr12:50488313 synonymous SNV . 0 22 hPsi_associated_SNPs_19373 0 0 1 0 1 Cytosol 0.438718359025678 0.438718472753924 0 0 hPsi_site_13097 iPseU_CNN:0;iRNA_PseU:0 13098 chr19 35827012 35827012 1 + G A COAD 35827011 + 35826991 35827031 41 GGAAGTCACTCTGACCTGCTTGCTGAATTTCTCCTGCTATG GGAAGTCACTCTGACCTGCTTACTGAATTTCTCCTGCTATG < 41bp 0.505083390173579 0.874652429624495 0.27563447 0.57679236 prediction 0.739138078901832 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35827011 chr19:35827012 synonymous SNV . 0 22 hPsi_associated_SNPs_19374 0 0 0 0 1 Endoplasmic reticulum 0.4387185908553 0.438718782986307 0.15358472 0 hPsi_site_13098 iPseU_CNN:0.15358472;iRNA_PseU:0 13099 chr10 121429476 121429476 1 + G A LAML 121429475 + 121429455 121429495 41 AGGCTACATTCCCATTCCTGTGCTCCATGAAGGCGCTGAGA AGGCTACATTCCCATTCCTGTACTCCATGAAGGCGCTGAGA < 41bp 0.490139508740285 0.869568637187752 0.16870546 0.7832639 prediction 0.739137274375503 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121429475 chr10:121429476 synonymous SNV . 0 22 hPsi_associated_SNPs_19375 0 0 1 0 0 Nucleus 0.438718455251728 0.438718667684764 0.5665278 0 hPsi_site_13099 iPseU_CNN:0.5665278;iRNA_PseU:0 13100 chr10 12148287 12148287 1 + G A CESC 12148286 + 12148266 12148306 41 GAAGAGGCCGTCCTGGGATTTGAATATGGGATGAGCATTGA GAAGAGGCCGTCCTGGGATTTAAATATGGGATGAGCATTGA < 41bp 0.513067556228309 0.882610342822679 0.20647594 0.27552852 prediction 0.73908557318874 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12148286 chr10:12148287 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_19376 0 0 0 0 1 Endoplasmic reticulum 0.43850090980324 0.438740431504543 0 0 hPsi_site_13100 iPseU_CNN:0;iRNA_PseU:0 13101 chr6 3129308 3129308 1 + G A rs148936859 3129307 + 3129287 3129327 41 GTTTAAGAAGGTTTCTCTGCTGGGGTGGAGTGATGGGGGCA GTTTAAGAAGGTTTCTCTGCTAGGGTGGAGTGATGGGGGCA < 41bp 0.499976222862267 0.869529805036267 0.21213567 0.28551614 prediction 0.739059610072535 Functional Gain - BPHL ENSG00000137274 CDS Human protein_coding chr6:3129307 chr6:3129308 synonymous SNV . 0 22 hPsi_associated_SNPs_19377 0 0 1 0 1 Ribosome 0.438718592606048 0.438718692585784 0 0 hPsi_site_13101 iPseU_CNN:0;iRNA_PseU:0 13102 chr15 41021787 41021787 1 + G A UCEC 41021786 + 41021766 41021806 41 TGAGCTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGC TGAGCTTTCAGCCAGGCAGATACACTTGGCCAGGTTTCTGC < 41bp 0.509698471930594 0.879186555832877 0.26114544 0.7080414 prediction 0.738976167804566 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41021786 chr15:41021787 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19378 0 0 0 1 2 Cytosol 0.438767755525828 0.438737473637414 0.4160828 0 hPsi_site_13102 iPseU_CNN:0.4160828;iRNA_PseU:0 13103 chr19 14069952 14069952 1 + G A UCEC 14069951 + 14069931 14069971 41 CAGAGCCCAGAGCTGCCCCCTGCCCTCCCCAGCTTCTGCCC CAGAGCCCAGAGCTGCCCCCTACCCTCCCCAGCTTCTGCCC < 41bp 0.502089645164398 0.871549811775846 0.28380412 0.45645332 prediction 0.738920333222896 Functional Gain - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14069951 chr19:14069952 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_19379 0 0 1 0 1 Cytosol 0.438718592995102 0.4387185929951 0 0 hPsi_site_13103 iPseU_CNN:0;iRNA_PseU:0 13104 chr19 35790644 35790644 1 + G A rs3746249 35790643 + 35790623 35790663 41 CACCTGGGTGCAGGTGTCACTGCTGCACTTCGTGCCCACGA CACCTGGGTGCAGGTGTCACTACTGCACTTCGTGCCCACGA < 41bp 0.503946715934787 0.873395492155788 0.3455172 0.49063656 prediction 0.738897552442001 Functional Gain - MAG ENSG00000105695 CDS Human protein_coding chr19:35790643 chr19:35790644 synonymous SNV . 0 22 hPsi_associated_SNPs_19380 0 0 0 0 0 Endoplasmic reticulum 0.43871115675914 0.438718321686066 0 0 hPsi_site_13104 iPseU_CNN:0;iRNA_PseU:0 13105 chr3 184003333 184003333 1 + G A UCEC 184003332 + 184003312 184003352 41 TCAAGCCTGGACCGACGCTTTGAGTCTGCACAAGAGAAGCT TCAAGCCTGGACCGACGCTTTAAGTCTGCACAAGAGAAGCT < 41bp 0.487585424974 0.869442581810617 0.3022068 0.7257456 prediction 0.738885163621234 Functional Gain - ECE2 ENSG00000145194 CDS Human protein_coding chr3:184003332 chr3:184003333 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_19381 0 0 0 0 2 Ribosome 0.438718594706813 0.438689576724405 0.4514912 0 hPsi_site_13105 iPseU_CNN:0.4514912;iRNA_PseU:0 13106 chr17 77044038 77044038 1 + G A UCEC 77044037 + 77044017 77044057 41 GCAAAGCCAGAGCCTGATGCTGGAGCTGCGAGAGCAGGACC GCAAAGCCAGAGCCTGATGCTAGAGCTGCGAGAGCAGGACC < 41bp 0.493214788685076 0.869442082892457 0.16791853 0.26399243 prediction 0.738884165784913 Functional Gain - C1QTNF1 ENSG00000173918 CDS Human protein_coding chr17:77044037 chr17:77044038 synonymous SNV . 0 22 hPsi_associated_SNPs_19382 0 0 0 0 0 exosome 0.438718493385324 0.438621945600198 0 0 hPsi_site_13106 iPseU_CNN:0;iRNA_PseU:0 13107 chr20 30064536 30064536 1 + G A KIRP 30064535 + 30064515 30064555 41 TGGAGTGGGGAAGACCAGCTTGGCCAGCCTCTTTGCAGGGA TGGAGTGGGGAAGACCAGCTTAGCCAGCCTCTTTGCAGGGA < 41bp 0.49601729694819 0.869426561889757 0.20603243 0.26435047 prediction 0.738853123779514 Functional Gain - REM1 ENSG00000088320 CDS Human protein_coding chr20:30064535 chr20:30064536 synonymous SNV . 0 22 hPsi_associated_SNPs_19383 0 0 0 0 1 exosome 0.438718592995101 0.438718693817365 0 0 hPsi_site_13107 iPseU_CNN:0;iRNA_PseU:0 13108 chr16 81301561 81301561 1 + G A UCEC 81301560 + 81301540 81301580 41 GGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCCGCTCC GGAAGCACACAGAGGTGTTCTACTCCATCCCATCCCGCTCC < 41bp 0.481059097581898 0.86940546187057 0.28791153 0.7495363 prediction 0.738810923741141 Functional Gain - BCO1 ENSG00000135697 CDS Human protein_coding chr16:81301560 chr16:81301561 nonsynonymous SNV 0.967 5 22 hPsi_associated_SNPs_19384 0 0 0 0 1 exosome 0.438746534660239 0.439003158067383 0.4990726 0 hPsi_site_13108 iPseU_CNN:0.4990726;iRNA_PseU:0 13109 chr17 34934499 34934499 1 + G A UCEC 34934498 + 34934478 34934518 41 GCAGCAAAGAAAAGGGCTACTGTGCTGCACTTTATGAAGGC GCAGCAAAGAAAAGGGCTACTATGCTGCACTTTATGAAGGC < 41bp 0.499135878434088 0.869401848133038 0.33463916 0.3659625 prediction 0.738803696266076 Functional Gain - GGNBP2 ENSG00000005955 CDS Human other chr17:34934498 chr17:34934499 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19385 0 0 1 0 1 Nucleus 0.439031742813138 0.443001270217448 0 0 hPsi_site_13109 iPseU_CNN:0;iRNA_PseU:0 13110 chr17 7246755 7246755 1 + G A STAD 7246754 + 7246734 7246774 41 CTGGCGGGGGGCTGAGAGCCTGGAGGCTGCCCTGACCCACA CTGGCGGGGGGCTGAGAGCCTAGAGGCTGCCCTGACCCACA < 41bp 0.506657870419993 0.875975452417476 0.29865685 0.3501987 prediction 0.738635163994965 Functional Gain - ACAP1 ENSG00000072818 CDS Human protein_coding chr17:7246754 chr17:7246755 synonymous SNV . 0 22 hPsi_associated_SNPs_19386 0 0 1 0 1 nucleus 0.438718592113799 0.438718593098963 0 0 hPsi_site_13110 iPseU_CNN:0;iRNA_PseU:0 13111 chr14 21462197 21462197 1 + G A LIHC 21462196 + 21462176 21462216 41 GGACAGATCAGCTGCCATGTTGGTTTTGGCAGAAAAACTAC GGACAGATCAGCTGCCATGTTAGTTTTGGCAGAAAAACTAC < 41bp 0.487645911155718 0.869314332031736 0.30876386 0.44103885 prediction 0.738628664063472 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21462196 chr14:21462197 synonymous SNV . 0 22 hPsi_associated_SNPs_19387 0 0 1 0 2 Ribosome 0.438717107134071 0.438718594206454 0 0 hPsi_site_13111 iPseU_CNN:0;iRNA_PseU:0 13112 chr19 3151780 3151780 1 + G A rs2230330 3151779 + 3151759 3151799 41 GGACGTGCTCCGCAGCCGCATGCCCACCACTGGCATCAACG GGACGTGCTCCGCAGCCGCATACCCACCACTGGCATCAACG < 41bp 0.49538141323017 0.869293010283381 0.38181388 0.83534104 prediction 0.738586020566762 Functional Gain - GNA15 ENSG00000060558 CDS Human protein_coding chr19:3151779 chr19:3151780 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_19388 0 0 0 0 2 exosome 0.438583428763932 0.436111911994855 0.67068208 0 hPsi_site_13112 iPseU_CNN:0.67068208;iRNA_PseU:0 13113 chr2 27352634 27352634 1 + G A rs146000122 27352633 + 27352613 27352653 41 ATTCCACAGGATACTGGTGCTGAATCACCTGGCACAGGCCA ATTCCACAGGATACTGGTGCTAAATCACCTGGCACAGGCCA < 41bp 0.500234591290618 0.869494463315027 0.20224011 0.6190046 prediction 0.738519744048819 Functional Gain - ABHD1 ENSG00000143994 CDS Human protein_coding chr2:27352633 chr2:27352634 synonymous SNV . 0 22 hPsi_associated_SNPs_19389 0 0 0 4 1 exosome 0.439745789796363 0.434028414515349 0.2380092 0 hPsi_site_13113 iPseU_CNN:0.2380092;iRNA_PseU:0 13114 chr15 78837253 78837253 1 + G A PAAD 78837252 + 78837232 78837272 41 GCCAATACCTTGTGAGCAGTTGGTTACAGCGCTGTGTGATA GCCAATACCTTGTGAGCAGTTAGTTACAGCGCTGTGTGATA < 41bp 0.495067865910575 0.869250563984323 0.27116472 0.49752182 prediction 0.738501127968647 Functional Gain - PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78837252 chr15:78837253 synonymous SNV . 0 22 hPsi_associated_SNPs_19390 0 0 1 0 2 Ribosome 0.438713205726795 0.434161818107221 0 0 hPsi_site_13114 iPseU_CNN:0;iRNA_PseU:0 13115 chr12 56397597 56397597 1 + G A CESC 56397596 + 56397576 56397616 41 CCCTTCTGGGCCCTCTATGCTGTTCACAACCAGTCCCATGT CCCTTCTGGGCCCTCTATGCTATTCACAACCAGTCCCATGT < 41bp 0.506805689739531 0.875991116339521 0.38080102 0.5734191 prediction 0.73837085319998 Functional Gain - SUOX ENSG00000139531 CDS Human protein_coding chr12:56397596 chr12:56397597 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_19391 0 0 1 0 0 Cytosol 0.434762960659597 0.438731501522521 0.1468382 0 hPsi_site_13115 iPseU_CNN:0.1468382;iRNA_PseU:0 13116 chr2 113832828 113832828 1 + G A STAD 113832827 + 113832807 113832847 41 GCCTTCAGGCTTGAGGCTGCTGCCTGGCCTGGCTGGTTCCT GCCTTCAGGCTTGAGGCTGCTACCTGGCCTGGCTGGTTCCT < 41bp 0.493018436392154 0.86916532009638 0.24023855 0.6944495 prediction 0.73833064019276 Functional Gain - IL1F10 ENSG00000136697 CDS Human protein_coding chr2:113832827 chr2:113832828 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_19392 0 0 0 0 1 unknown 0.438789640194118 0.438758792723091 0.388899 0 hPsi_site_13116 iPseU_CNN:0.388899;iRNA_PseU:0 13117 chr20 18163827 18163827 1 + G A BLCA 18163826 + 18163806 18163846 41 GTCACAGATTCGTTCCCACCTGCACAGGAGCGACCCTCACT GTCACAGATTCGTTCCCACCTACACAGGAGCGACCCTCACT < 41bp 0.487742133495486 0.869158242456468 0.18611184 0.3674582 prediction 0.738316484912935 Functional Gain - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18163826 chr20:18163827 synonymous SNV . 0 22 hPsi_associated_SNPs_19393 0 0 1 0 1 Nucleus 0.438697803872676 0.437429298236237 0 0 hPsi_site_13117 iPseU_CNN:0;iRNA_PseU:0 Systemic lupus erythematosus 13118 chr11 45949768 45949768 1 + G A LGG 45949767 + 45949747 45949787 41 GGCCACGCACCCACAGACTATGCCCGCTGGCGGGAGGCTCA GGCCACGCACCCACAGACTATACCCGCTGGCGGGAGGCTCA < 41bp 0.507976824749983 0.877107016948621 0.283585 0.5467686 prediction 0.738260384397276 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949767 chr11:45949768 nonsynonymous SNV 0.938 0 22 hPsi_associated_SNPs_19394 0 0 1 0 1 chromatin 0.438718585477253 0.438718487183621 0.0935372000000001 0 hPsi_site_13118 iPseU_CNN:0.0935372000000001;iRNA_PseU:0 13119 chr2 217293450 217293450 1 + G A HNSC 217293449 + 217293429 217293469 41 GTCCCAGAGGCAGACCTTTCTGAAGTGGACCCCAAGCTCGT GTCCCAGAGGCAGACCTTTCTAAAGTGGACCCCAAGCTCGT < 41bp 0.484513367927216 0.869085177330366 0.30601883 0.41183433 prediction 0.738170354660732 Functional Gain - SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217293449 chr2:217293450 nonsynonymous SNV 0.878 0 22 hPsi_associated_SNPs_19395 0 0 1 0 1 chromatin 0.43871716390829 0.43871726833978 0 0 hPsi_site_13119 iPseU_CNN:0;iRNA_PseU:0 13120 chr3 51749229 51749229 1 + G A SKCM 51749228 + 51749208 51749248 41 CTGGGCAGAAGGCTTGACTCTGGACACCAGCCTCATCCCAT CTGGGCAGAAGGCTTGACTCTAGACACCAGCCTCATCCCAT < 41bp 0.492594755250789 0.869077873273782 0.22090349 0.3717131 prediction 0.738155746547565 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51749228 chr3:51749229 synonymous SNV . 0 22 hPsi_associated_SNPs_19396 0 0 0 1 0 Endoplasmic reticulum 0.438718745229628 0.438709656857208 0 0 hPsi_site_13120 iPseU_CNN:0;iRNA_PseU:0 13121 chr6 36652140 36652140 1 + G A BLCA 36652139 + 36652119 36652159 41 GGGCCCCGGCGAGGCCGGGATGAGTTGGGAGGAGGCAGGCG GGGCCCCGGCGAGGCCGGGATAAGTTGGGAGGAGGCAGGCG < 41bp 0.498185587335409 0.869075458902181 0.43125135 0.62479156 prediction 0.738150917804362 Functional Gain - CDKN1A ENSG00000124762 CDS Human protein_coding chr6:36652139 chr6:36652140 nonsynonymous SNV 0.224 0 22 hPsi_associated_SNPs_19397 0 0 1 0 0 Cytosol 0.43861647292208 0.438827672626367 0.24958312 0 hPsi_site_13121 iPseU_CNN:0.24958312;iRNA_PseU:0 13122 chr2 47702214 47702214 1 + G A ESCA 47702213 + 47702193 47702233 41 GATGTGTTAGCTCAGCTAGATGCTGTTGTCAGCTTTGCTCA GATGTGTTAGCTCAGCTAGATACTGTTGTCAGCTTTGCTCA < 41bp 0.496228804844708 0.869070366181952 0.32091045 0.4810064 prediction 0.738140732363904 Functional Gain - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47702213 chr2:47702214 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_19398 0 0 1 4 1 Cytosol 0.442782072141126 0.449011883875276 0 0 hPsi_site_13122 iPseU_CNN:0;iRNA_PseU:0 13123 chr21 40190380 40190380 1 + G A COAD 40190379 + 40190359 40190399 41 AGAGCAGGCGCCCTATGGAATGCAGACACAGAATTACCCCA AGAGCAGGCGCCCTATGGAATACAGACACAGAATTACCCCA < 41bp 0.484252387849398 0.869010259086736 0.43090057 0.7056318 prediction 0.738020518173471 Functional Gain - ETS2 ENSG00000157557 CDS Human protein_coding chr21:40190379 chr21:40190380 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_19399 0 0 1 0 1 Ribosome 0.438718536380864 0.43871894573144 0.4112636 0 hPsi_site_13123 iPseU_CNN:0.4112636;iRNA_PseU:0 13124 chr19 54967556 54967556 1 + G A rs143145059 54967555 + 54967535 54967575 41 TCAGGGAATGAGTGTCACCCTGTGGGCCGCAGGAACCCGCC TCAGGGAATGAGTGTCACCCTATGGGCCGCAGGAACCCGCC < 41bp 0.488904944829349 0.868991640834847 0.22122487 0.2404179 prediction 0.737983281669694 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967555 chr19:54967556 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19400 0 0 1 0 2 chromatin 0.438718592994621 0.43871859301186 0 0 hPsi_site_13124 iPseU_CNN:0;iRNA_PseU:0 13125 chr3 14803054 14803054 1 + G A SKCM 14803053 + 14803033 14803073 41 CCTCAGCAAGCAGAATCTGCTGAAACAGATCTTCCGGTCTC CCTCAGCAAGCAGAATCTGCTAAAACAGATCTTCCGGTCTC < 41bp 0.491189883117805 0.868990900504804 0.30972198 0.3570568 prediction 0.737981801009608 Functional Gain - C3orf20 ENSG00000131379 CDS Human protein_coding chr3:14803053 chr3:14803054 synonymous SNV . 0 22 hPsi_associated_SNPs_19401 0 0 0 0 2 nucleoplasm 0.438717717962577 0.438722199418012 0 0 hPsi_site_13125 iPseU_CNN:0;iRNA_PseU:0 13126 chr2 23865261 23865261 1 + G A UCEC 23865260 + 23865240 23865280 41 GGGAACCAGCCCACCCTGATTGCACACTCCTATGGAGTGGC GGGAACCAGCCCACCCTGATTACACACTCCTATGGAGTGGC < 41bp 0.504323986571414 0.873305036429416 0.2700659 0.63703847 prediction 0.737962099716005 Functional Gain - KLHL29 ENSG00000119771 CDS Human protein_coding chr2:23865260 chr2:23865261 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_19402 0 0 0 0 1 insoluble cytoplasm 0.438841866406719 0.448456830378384 0.27407694 0 hPsi_site_13126 iPseU_CNN:0.27407694;iRNA_PseU:0 13127 chr19 57133852 57133852 1 + G A UCEC 57133851 + 57133831 57133871 41 GGGGCGCTCGTCCCTCATCGTGCACCAGATCGTGCACACCG GGGGCGCTCGTCCCTCATCGTACACCAGATCGTGCACACCG < 41bp 0.497704138580623 0.868975796072515 0.27562648 0.69627 prediction 0.737951592145029 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133851 chr19:57133852 synonymous SNV . 0 22 hPsi_associated_SNPs_19403 0 0 0 0 0 exosome 0.441076769770856 0.43881825700178 0.39254 0 hPsi_site_13127 iPseU_CNN:0.39254;iRNA_PseU:0 13128 chr19 35757365 35757365 1 + G A SKCM 35757364 + 35757344 35757384 41 GACCCCACCCCCACCAGCTATGATTCCCATGGGCCCTGCCT GACCCCACCCCCACCAGCTATAATTCCCATGGGCCCTGCCT < 41bp 0.480726768691845 0.868935221577875 0.27935275 0.35518798 prediction 0.737870443155749 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35757364 chr19:35757365 nonsynonymous SNV 0.950 0 22 hPsi_associated_SNPs_19404 0 0 1 0 1 chromatin 0.438719187754528 0.438718592995111 0 0 hPsi_site_13128 iPseU_CNN:0;iRNA_PseU:0 13129 chr1 159751966 159751966 1 + G A LIHC 159751965 + 159751945 159751985 41 TGTGGGAGTGCACTGTGCTCTGGGCTTTGGCCGCACTGGCA TGTGGGAGTGCACTGTGCTCTAGGCTTTGGCCGCACTGGCA < 41bp 0.502794240642267 0.871708885815533 0.41528237 0.8083353 prediction 0.737829290346532 Functional Gain - DUSP23 ENSG00000158716 CDS Human protein_coding chr1:159751965 chr1:159751966 synonymous SNV . 0 22 hPsi_associated_SNPs_19405 0 0 0 0 1 Ribosome 0.438766371465068 0.4373185106471 0.6166706 0 hPsi_site_13129 iPseU_CNN:0.6166706;iRNA_PseU:0 13130 chrX 68725818 68725818 1 + G A rs759359643 68725817 + 68725797 68725837 41 GATGGGGGACCTGCTGGCCGTGGTGGCCAGCCCGGGCTCCG GATGGGGGACCTGCTGGCCGTAGTGGCCAGCCCGGGCTCCG < 41bp 0.497203711616587 0.868905169965556 0.28312516 0.8696687 prediction 0.737810339931113 Functional Gain - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68725817 chrX:68725818 synonymous SNV . 0 22 hPsi_associated_SNPs_19406 0 0 0 0 0 exosome 0.438985155646493 0.438765302285949 0.7393374 0 hPsi_site_13130 iPseU_CNN:0.7393374;iRNA_PseU:0 13131 chr9 136508609 136508609 1 + G A SKCM 136508608 + 136508588 136508628 41 CTTCCAGTGCGCCCCCGAGATGGACAGCGTCCCCCACTTCA CTTCCAGTGCGCCCCCGAGATAGACAGCGTCCCCCACTTCA < 41bp 0.484848692007176 0.868904555281491 0.23906413 0.29030967 prediction 0.737809110562982 Functional Gain - DBH ENSG00000123454 CDS Human protein_coding chr9:136508608 chr9:136508609 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19407 0 0 0 0 1 cytosol 0.438614652075934 0.438722677500156 0 0 hPsi_site_13131 iPseU_CNN:0;iRNA_PseU:0 13132 chr20 2381043 2381043 1 + G A SKCM 2381042 + 2381022 2381062 41 CCTGAGTGTGGACAAATACGTGGACTCCTTCGGGCGGACCC CCTGAGTGTGGACAAATACGTAGACTCCTTCGGGCGGACCC < 41bp 0.492979866117245 0.868903438374453 0.30498284 0.8028055 prediction 0.737806876748905 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2381042 chr20:2381043 synonymous SNV . 0 22 hPsi_associated_SNPs_19408 0 0 0 0 2 exosome 0.438718593004504 0.438718610358364 0.605611 0 hPsi_site_13132 iPseU_CNN:0.605611;iRNA_PseU:0 13133 chr1 53250615 53250615 1 + G A STAD 53250614 + 53250594 53250634 41 CAACTGGCTGCAAGCGCCTGTGTATTTAACTTAACCAAGCA CAACTGGCTGCAAGCGCCTGTATATTTAACTTAACCAAGCA < 41bp 0.507116869760985 0.87601156368175 0.2698089 0.31476313 prediction 0.73778938784153 Functional Gain - ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53250614 chr1:53250615 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_19409 0 0 1 0 1 Ribosome 0.443114290401158 0.441267815158668 0 0 hPsi_site_13133 iPseU_CNN:0;iRNA_PseU:0 13134 chr22 21327621 21327621 1 + G A COAD 21327620 + 21327600 21327640 41 GCTCAAGATCGAGGTGGTGCTGCCTGAGAAGGAGCGAGGCA GCTCAAGATCGAGGTGGTGCTACCTGAGAAGGAGCGAGGCA < 41bp 0.504367467703251 0.873246263857183 0.19699576 0.36806023 prediction 0.737757592307865 Functional Gain - AIFM3 ENSG00000183773 CDS Human protein_coding chr22:21327620 chr22:21327621 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19410 0 0 1 0 2 exosome 0.438613600601335 0.438732124167601 0 0 hPsi_site_13134 iPseU_CNN:0;iRNA_PseU:0 13135 chr2 39944285 39944285 1 + G A rs147809327 39944284 + 39944264 39944304 41 GGTCCATCTTTTGCGCCTGGTGCAGTTTAGGCTTTATTGTG GGTCCATCTTTTGCGCCTGGTACAGTTTAGGCTTTATTGTG < 41bp 0.503712979014845 0.872568183890177 0.42125803 0.8108751 prediction 0.737710409750663 Functional Gain - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39944284 chr2:39944285 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19411 0 0 0 0 0 exosome 0.438718921448828 0.438708519722252 0.6217502 0 hPsi_site_13135 iPseU_CNN:0.6217502;iRNA_PseU:0 13136 chr2 131520521 131520521 1 + G A SKCM 131520520 + 131520500 131520540 41 GGGCCCTCTCCAGGGCAGTGTGGAGCAGCTGGCCTCGCCCG GGGCCCTCTCCAGGGCAGTGTAGAGCAGCTGGCCTCGCCCG < 41bp 0.484374337121284 0.868819571854784 0.31378037 0.59085494 prediction 0.737639143709569 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131520520 chr2:131520521 synonymous SNV . 0 22 hPsi_associated_SNPs_19412 0 0 0 0 0 Nucleus 0.438718591131194 0.438718592301465 0.18170988 0 hPsi_site_13136 iPseU_CNN:0.18170988;iRNA_PseU:0 13137 chr16 67316211 67316211 1 + G A LUSC 67316210 + 67316190 67316230 41 GGGCCGGGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGG GGGCCGGGAGCTGACATGGCTAAAGCAAGAGGTCCCAGAGG < 41bp 0.490583673488751 0.868819531764076 0.38874686 0.67701733 prediction 0.737639063528153 Functional Gain - PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67316210 chr16:67316211 synonymous SNV . 0 22 hPsi_associated_SNPs_19413 0 0 1 0 1 Cytosol 0.438718568357021 0.438718592722906 0.35403466 0 hPsi_site_13137 iPseU_CNN:0.35403466;iRNA_PseU:0 13138 chr17 38244579 38244579 1 + G A SKCM 38244578 + 38244558 38244598 41 GCGGCTGTCCGCTACGACCCTGAGAGCGACACCCTGACGCT GCGGCTGTCCGCTACGACCCTAAGAGCGACACCCTGACGCT < 41bp 0.480940126887055 0.868816427770122 0.2514146 0.33874252 prediction 0.737632855540244 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38244578 chr17:38244579 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19414 0 0 0 0 1 Ribosome 0.438728479427841 0.438717669481031 0 0 hPsi_site_13138 iPseU_CNN:0;iRNA_PseU:0 13139 chr22 39907368 39907368 1 + G A rs17400681 39907367 + 39907347 39907387 41 TGGCACGGCCATTGACTTTGTGCTCTCCAATGCCCGGCTGG TGGCACGGCCATTGACTTTGTACTCTCCAATGCCCGGCTGG < 41bp 0.485621437822587 0.868814399700552 0.30904657 0.8960424 prediction 0.737628799401105 Functional Gain - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39907367 chr22:39907368 synonymous SNV . 0 22 hPsi_associated_SNPs_19415 0 0 1 0 2 chromatin 0.438550431363798 0.43834183178859 0.7920848 0 hPsi_site_13139 iPseU_CNN:0.7920848;iRNA_PseU:0 13140 chr14 24572732 24572732 1 + G A COAD 24572731 + 24572711 24572751 41 CCCCCCAGGGAAGATCATCATGCACGACCCATTTGCCATGC CCCCCCAGGGAAGATCATCATACACGACCCATTTGCCATGC < 41bp 0.499948694028386 0.868791923672859 0.21300104 0.78647625 prediction 0.737583847345717 Functional Gain - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24572731 chr14:24572732 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_19416 0 0 1 0 1 Endoplasmic reticulum 0.438814921123287 0.43948004531912 0.5729525 0 hPsi_site_13140 iPseU_CNN:0.5729525;iRNA_PseU:0 13141 chr6 16290809 16290809 1 + G A BLCA 16290808 + 16290788 16290828 41 CTCTTCTACGGGATGAGCTCTGACACCGCCATGAACAAGCA CTCTTCTACGGGATGAGCTCTAACACCGCCATGAACAAGCA < 41bp 0.491115033087814 0.868774782852678 0.26605815 0.37087077 prediction 0.737549565705356 Functional Gain - GMPR ENSG00000137198 CDS Human protein_coding chr6:16290808 chr6:16290809 nonsynonymous SNV 0.230 0 22 hPsi_associated_SNPs_19417 0 0 1 0 1 Cytosol 0.438724809896459 0.438717922702568 0 0 hPsi_site_13141 iPseU_CNN:0;iRNA_PseU:0 13142 chr1 110766466 110766466 1 + G A rs12411176 110766465 + 110766445 110766485 41 CTTCCCCCCGGGACAGCACCTGCAGTGATACCAGCCCCCCT CTTCCCCCCGGGACAGCACCTACAGTGATACCAGCCCCCCT < 41bp 0.49824768572607 0.868763720893382 0.35828364 0.80601364 prediction 0.737527441786764 Functional Gain - KCNC4 ENSG00000116396 CDS Human protein_coding chr1:110766465 chr1:110766466 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_19418 0 0 0 0 1 Nucleus 0.438720724224576 0.438718601245478 0.61202728 0 hPsi_site_13142 iPseU_CNN:0.61202728;iRNA_PseU:0 13143 chr1 156703213 156703213 1 + G A BLCA 156703212 + 156703192 156703232 41 TCTTGGCCTGGGGTTGATGGTGAAGAGCATCGAAGGGGATC TCTTGGCCTGGGGTTGATGGTAAAGAGCATCGAAGGGGATC < 41bp 0.486717434181067 0.868763350907537 0.33636594 0.7832823 prediction 0.737526701815075 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703212 chr1:156703213 synonymous SNV . 0 22 hPsi_associated_SNPs_19419 0 0 1 0 2 chromatin 0.438459051496063 0.438718593172242 0.5665646 0 hPsi_site_13143 iPseU_CNN:0.5665646;iRNA_PseU:0 13144 chr21 45877042 45877042 1 + G A STAD 45877041 + 45877021 45877061 41 ACTCTGTGGACGAGATCGCCTGCCACACCTCAGTGCAGGAG ACTCTGTGGACGAGATCGCCTACCACACCTCAGTGCAGGAG < 41bp 0.507279413099717 0.87603366976563 0.29142022 0.591461 prediction 0.737508513331827 Functional Gain - LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45877041 chr21:45877042 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_19420 0 0 0 0 0 exosome 0.438718480511878 0.438718541446225 0.182922 0 hPsi_site_13144 iPseU_CNN:0.182922;iRNA_PseU:0 13145 chr3 45988278 45988278 1 + G A STAD 45988277 + 45988257 45988297 41 GGGTGTTTGGCCAGGTCATGTGCAAGAGCCTACTGGGCATC GGGTGTTTGGCCAGGTCATGTACAAGAGCCTACTGGGCATC < 41bp 0.499917056013669 0.868743538914461 0.3863623 0.7582663 prediction 0.737487077828921 Functional Gain - CXCR6 ENSG00000172215 CDS Human protein_coding chr3:45988277 chr3:45988278 nonsynonymous SNV 0.555 4 22 hPsi_associated_SNPs_19421 0 0 0 0 0 exosome 0.438753555810169 0.438691931774523 0.5165326 0 hPsi_site_13145 iPseU_CNN:0.5165326;iRNA_PseU:0 13146 chr3 39374254 39374254 1 + G A BLCA 39374253 + 39374233 39374273 41 TGCCGTGTATGCCCTAAAGGTGAGGACGATCAGGATGGGCA TGCCGTGTATGCCCTAAAGGTAAGGACGATCAGGATGGGCA < 41bp 0.491772713295577 0.868735143311835 0.28528455 0.34264153 prediction 0.73747028662367 Functional Gain - CCR8 ENSG00000179934 CDS Human protein_coding chr3:39374253 chr3:39374254 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_19422 0 0 0 0 0 exosome 0.438718593400032 0.438718594730234 0 0 hPsi_site_13146 iPseU_CNN:0;iRNA_PseU:0 13147 chr17 46022009 46022009 1 + G A LAML 46022008 + 46021988 46022028 41 AAAACCCTCTGCTCGCATGTTGCTGCTGAAGGGCTTCGGGA AAAACCCTCTGCTCGCATGTTACTGCTGAAGGGCTTCGGGA < 41bp 0.485012321198298 0.868727201697271 0.32977006 0.5384347 prediction 0.737454403394542 Functional Gain - PNPO ENSG00000108439 CDS Human protein_coding chr17:46022008 chr17:46022009 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19423 0 0 1 0 2 Ribosome 0.438510863110817 0.437676297093145 0.0768694000000001 0 hPsi_site_13147 iPseU_CNN:0.0768694000000001;iRNA_PseU:0 13148 chr2 63282759 63282759 1 + G A UCEC 63282758 + 63282738 63282778 41 AGCTCGGGCTCCGAAAGCAGTGGCCAATTCACGCCGCCAGC AGCTCGGGCTCCGAAAGCAGTAGCCAATTCACGCCGCCAGC < 41bp 0.492949717975242 0.868715383107195 0.25580752 0.62592024 prediction 0.737430766214389 Functional Gain - OTX1 ENSG00000115507 CDS Human protein_coding chr2:63282758 chr2:63282759 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19424 0 0 0 0 0 nucleoplasm 0.438718647274832 0.438718593032234 0.25184048 0 hPsi_site_13148 iPseU_CNN:0.25184048;iRNA_PseU:0 13149 chr1 207870975 207870975 1 + G A rs17046685 207870974 + 207870954 207870994 41 CCTCAGAGGATCTACGTATTTGCACTGCACACCCCAGGGAG CCTCAGAGGATCTACGTATTTACACTGCACACCCCAGGGAG < 41bp 0.497229256263504 0.868709014116228 0.47199377 0.8985253 prediction 0.737418028232457 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207870974 chr1:207870975 synonymous SNV . 0 22 hPsi_associated_SNPs_19425 0 0 0 10 1 Endoplasmic reticulum 0.438718615351798 0.438720770896512 0.7970506 0 hPsi_site_13149 iPseU_CNN:0.7970506;iRNA_PseU:0 13150 chrX 150348839 150348839 1 + G A UCEC 150348838 + 150348818 150348858 41 GTGCTCACTGTCTTGGTGGCTGTCAGTCCGAAGGAGATGGC GTGCTCACTGTCTTGGTGGCTATCAGTCCGAAGGAGATGGC < 41bp 0.49139115379543 0.868694348428967 0.256657 0.5966432 prediction 0.737388696857934 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150348838 chrX:150348839 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_19426 0 0 0 0 0 exosome 0.436541573775529 0.437113895534403 0.1932864 0 hPsi_site_13150 iPseU_CNN:0.1932864;iRNA_PseU:0 13151 chr17 47219493 47219493 1 + G A SKCM 47219492 + 47219472 47219512 41 CCAGAGCGACCTCCCAGCGGTGAAAGCGAGGAGACAGGCTG CCAGAGCGACCTCCCAGCGGTAAAAGCGAGGAGACAGGCTG < 41bp 0.484664579738147 0.868689135496939 0.28801137 0.57166356 prediction 0.737378270993878 Functional Gain - B4GALNT2 ENSG00000167080 CDS Human protein_coding chr17:47219492 chr17:47219493 synonymous SNV . 0 22 hPsi_associated_SNPs_19427 0 0 0 0 2 nucleolus 0.438718116768558 0.438718584255771 0.14332712 0 hPsi_site_13151 iPseU_CNN:0.14332712;iRNA_PseU:0 13152 chr11 62556641 62556641 1 + G A UCEC 62556640 + 62556620 62556660 41 CCTCTACTGCCTCCTGCTTTTGCTCTTCTGGATCTACAGCA CCTCTACTGCCTCCTGCTTTTACTCTTCTGGATCTACAGCA < 41bp 0.489028379951192 0.868670821442634 0.38358533 0.73695457 prediction 0.737341642885267 Functional Gain - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62556640 chr11:62556641 synonymous SNV . 0 22 hPsi_associated_SNPs_19428 0 0 1 0 1 Ribosome 0.438709141108633 0.438697699474542 0.47390914 0 hPsi_site_13152 iPseU_CNN:0.47390914;iRNA_PseU:0 13153 chr11 130066296 130066296 1 + G A UCEC 130066295 + 130066275 130066315 41 CTACCTGCTGGAGCCCGGCGTGCCTGCGGGCACCTGCCCCA CTACCTGCTGGAGCCCGGCGTACCTGCGGGCACCTGCCCCA < 41bp 0.475235410550031 0.868665164524759 0.25293344 0.70422465 prediction 0.737330329049519 Functional Gain - ST14 ENSG00000149418 CDS Human protein_coding chr11:130066295 chr11:130066296 synonymous SNV . 0 22 hPsi_associated_SNPs_19429 0 0 0 0 2 Ribosome 0.438721434247067 0.438733572536258 0.4084493 0 hPsi_site_13153 iPseU_CNN:0.4084493;iRNA_PseU:0 13154 chr17 37357551 37357551 1 + G A LUSC 37357550 + 37357530 37357570 41 TTAGACCCCAATGAGACCAATGAAATCGCCAATGCCAACTC TTAGACCCCAATGAGACCAATAAAATCGCCAATGCCAACTC < 41bp 0.493960247069153 0.868658490856438 0.28041035 0.32880414 prediction 0.737316981712876 Functional Gain - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357550 chr17:37357551 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_19430 0 0 1 0 2 chromatin 0.438712088097496 0.438699055841519 0 0 hPsi_site_13154 iPseU_CNN:0;iRNA_PseU:0 13155 chr4 156723554 156723554 1 + G A OV 156723553 + 156723533 156723573 41 GCTGCGGCACAAGCGTCCAGTGCCTGCCAAAAGATATGACA GCTGCGGCACAAGCGTCCAGTACCTGCCAAAAGATATGACA < 41bp 0.510680065942664 0.87933801718982 0.25896198 0.58706766 prediction 0.737315902494311 Functional Gain - GUCY1B3 ENSG00000061918 CDS Human protein_coding chr4:156723553 chr4:156723554 synonymous SNV . 0 22 hPsi_associated_SNPs_19431 0 0 0 0 1 Ribosome 0.438694937070334 0.438686030970506 0.17413532 0 hPsi_site_13155 iPseU_CNN:0.17413532;iRNA_PseU:0 13156 chr17 72786434 72786434 1 + G A UCEC 72786433 + 72786413 72786453 41 GAAGCGGCCCATCCTGTCTGTGCGTAAGTCTTGGGGTTCTC GAAGCGGCCCATCCTGTCTGTACGTAAGTCTTGGGGTTCTC < 41bp 0.485840281380502 0.868653117083802 0.31310934 0.76052403 prediction 0.737306234167603 Functional Gain - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72786433 chr17:72786434 synonymous SNV . 0 22 hPsi_associated_SNPs_19432 0 0 1 0 2 Endoplasmic reticulum 0.438186595668329 0.438689896681898 0.52104806 0 hPsi_site_13156 iPseU_CNN:0.52104806;iRNA_PseU:0 13157 chr11 66288807 66288807 1 + G A UCEC 66288806 + 66288786 66288826 41 TTTGATGTTGAGTTCCGGCTTGCCGCGGCCTGCCGCAATGG TTTGATGTTGAGTTCCGGCTTACCGCGGCCTGCCGCAATGG < 41bp 0.485253994982405 0.868638165688424 0.2554555 0.5089976 prediction 0.737276331376847 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66288806 chr11:66288807 nonsynonymous SNV 0.621 0 22 hPsi_associated_SNPs_19433 0 0 1 0 2 membrane 0.43874939272224 0.438697005014569 0.0179952000000001 0 hPsi_site_13157 iPseU_CNN:0.0179952000000001;iRNA_PseU:0 13158 chr16 30035039 30035039 1 + G A GBM 30035038 + 30035018 30035058 41 CTGTTGTCACAGAGTTTGCTTGGGTCCTAGCACCCAGACCC CTGTTGTCACAGAGTTTGCTTAGGTCCTAGCACCCAGACCC < 41bp 0.504939920825181 0.873560437108925 0.40701705 0.8373718 prediction 0.737241032567489 Functional Gain - C16orf92 ENSG00000167194 CDS Human protein_coding chr16:30035038 chr16:30035039 stopgain 0.225 0 22 hPsi_associated_SNPs_19434 0 0 0 0 0 unknown 0.438718611128659 0.438879789431054 0.6747436 0 hPsi_site_13158 iPseU_CNN:0.6747436;iRNA_PseU:0 13159 chr20 33586908 33586908 1 + G A GBM 33586907 + 33586887 33586927 41 GCAGAGGAGGGCGTGGAGGCTGCCAACGCCAAGTGCTCATC GCAGAGGAGGGCGTGGAGGCTACCAACGCCAAGTGCTCATC < 41bp 0.503321934225954 0.871939414259487 0.40394795 0.7588794 prediction 0.737234960067066 Functional Gain - MYH7B ENSG00000078814 CDS Human protein_coding chr20:33586907 chr20:33586908 nonsynonymous SNV 0.059 1 22 hPsi_associated_SNPs_19435 0 0 0 0 1 chromatin 0.445563682295652 0.438648960839805 0.5177588 0 hPsi_site_13159 iPseU_CNN:0.5177588;iRNA_PseU:0 13160 chr1 17603071 17603071 1 + G A UCEC 17603070 + 17603050 17603090 41 CTTCCTCCATGCCCAGAAGGTGCAGCCCCCCGTGGAGCTCT CTTCCTCCATGCCCAGAAGGTACAGCCCCCCGTGGAGCTCT < 41bp 0.511207324609626 0.879819392453418 0.39299685 0.7337431 prediction 0.737224135687584 Functional Gain - PADI3 ENSG00000142619 CDS Human protein_coding chr1:17603070 chr1:17603071 synonymous SNV . 0 22 hPsi_associated_SNPs_19436 0 0 0 0 2 unknown 0.438718591681614 0.438718592620411 0.4674862 0 hPsi_site_13160 iPseU_CNN:0.4674862;iRNA_PseU:0 13161 chr15 42115228 42115228 1 + G A LIHC 42115227 + 42115207 42115247 41 GAGCAGCCGAGAGGCAATGGTGCCAATCCCCCTGGAGCACC GAGCAGCCGAGAGGCAATGGTACCAATCCCCCTGGAGCACC < 41bp 0.48443742202475 0.868607757016669 0.32145703 0.8500247 prediction 0.737215514033338 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42115227 chr15:42115228 nonsynonymous SNV 0.751 0 22 hPsi_associated_SNPs_19437 0 0 0 0 1 Endoplasmic reticulum 0.438718598726793 0.438718564130075 0.7000494 0 hPsi_site_13161 iPseU_CNN:0.7000494;iRNA_PseU:0 13162 chr7 44097389 44097389 1 + G A LUAD 44097388 + 44097368 44097408 41 CTGTCCCCTACAGGGCTCTGTGTACCAGAAGACCAATGCCG CTGTCCCCTACAGGGCTCTGTATACCAGAAGACCAATGCCG < 41bp 0.501900144339877 0.870505093110411 0.2865668 0.44916734 prediction 0.737209897541067 Functional Gain - DBNL ENSG00000136279 CDS Human protein_coding chr7:44097388 chr7:44097389 synonymous SNV . 0 22 hPsi_associated_SNPs_19438 0 0 1 0 2 Ribosome 0.43878566126575 0.437607342279192 0 0 hPsi_site_13162 iPseU_CNN:0;iRNA_PseU:0 13163 chr1 114523956 114523956 1 + G A LUSC 114523955 + 114523935 114523975 41 AGTATTCCCAGCAGAGGGGCTGATCCCCCCCTACGGCTTGA AGTATTCCCAGCAGAGGGGCTAATCCCCCCCTACGGCTTGA < 41bp 0.501328344991528 0.869927927986581 0.16104111 0.32637736 prediction 0.737199165990106 Functional Gain - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114523955 chr1:114523956 synonymous SNV . 0 22 hPsi_associated_SNPs_19439 0 0 1 0 0 exosome 0.4387185927048 0.43871858279779 0 0 hPsi_site_13163 iPseU_CNN:0;iRNA_PseU:0 13164 chr11 67377010 67377010 1 + G A STAD 67377009 + 67376989 67377029 41 ACGCCATGATCCTCACAAGCTGCTGGAAGGCTGCCTGGTGG ACGCCATGATCCTCACAAGCTACTGGAAGGCTGCCTGGTGG < 41bp 0.495968627560849 0.868563052824059 0.25978673 0.4625416 prediction 0.737126105648119 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67377009 chr11:67377010 synonymous SNV . 0 22 hPsi_associated_SNPs_19440 0 0 1 0 2 Ribosome 0.438879781745812 0.438977532242827 0 0 hPsi_site_13164 iPseU_CNN:0;iRNA_PseU:0 13165 chr1 111781504 111781504 1 + G A rs137918113 111781503 + 111781483 111781523 41 GGGGCCCCTGCCTCTGGCCCTGGAGCTGCTGGACCCATCAC GGGGCCCCTGCCTCTGGCCCTAGAGCTGCTGGACCCATCAC < 41bp 0.505841818372403 0.874401793854416 0.16363662 0.24121386 prediction 0.737119950964026 Functional Gain - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111781503 chr1:111781504 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_19441 0 0 0 0 1 exosome 0.439157674246679 0.438718675892575 0 0 hPsi_site_13165 iPseU_CNN:0;iRNA_PseU:0 13166 chr15 78390415 78390415 1 + G A LGG 78390414 + 78390394 78390434 41 GCTCGAGCCCTTCAAAGAGATGCTGACTGCTGCCTGCCCCC GCTCGAGCCCTTCAAAGAGATACTGACTGCTGCCTGCCCCC < 41bp 0.507444731996185 0.876000140838509 0.23249885 0.5221646 prediction 0.737110817684648 Functional Gain - SH2D7 ENSG00000183476 CDS Human protein_coding chr15:78390414 chr15:78390415 nonsynonymous SNV 0.475 0 22 hPsi_associated_SNPs_19442 0 0 0 0 1 unknown 0.43329933981231 0.438765827452198 0.0443292 0 hPsi_site_13166 iPseU_CNN:0.0443292;iRNA_PseU:0 13167 chr1 55060292 55060292 1 + G A LUAD 55060291 + 55060271 55060311 41 ATGGAGCACAGTGTGGCGGCTGAGCGCCGGCGCATGCGCCT ATGGAGCACAGTGTGGCGGCTAAGCGCCGGCGCATGCGCCT < 41bp 0.514213975706838 0.882754021228297 0.25304145 0.82802486 prediction 0.737080091042918 Functional Gain - ACOT11 ENSG00000162390 CDS Human protein_coding chr1:55060291 chr1:55060292 nonsynonymous SNV 0.813 4 22 hPsi_associated_SNPs_19443 0 0 1 0 2 chromatin 0.438699277384325 0.438744596837935 0.65604972 0 hPsi_site_13167 iPseU_CNN:0.65604972;iRNA_PseU:0 13168 chr17 7909773 7909773 1 + G A rs56034424 7909772 + 7909752 7909792 41 TGCCGCAGGTGGCAGATGGGTGTCCGGAGCAGCTGTGGCCC TGCCGCAGGTGGCAGATGGGTATCCGGAGCAGCTGTGGCCC < 41bp 0.495006967783599 0.868520603179138 0.3903315 0.648747 prediction 0.737041206358277 Functional Gain - GUCY2D ENSG00000132518 CDS Human protein_coding chr17:7909772 chr17:7909773 synonymous SNV . 0 22 hPsi_associated_SNPs_19444 0 0 0 0 1 exosome 0.438719608222441 0.438719015273415 0.297494 0 hPsi_site_13168 iPseU_CNN:0.297494;iRNA_PseU:0 13169 chr6 106543553 106543553 1 + G A SKCM 106543552 + 106543532 106543572 41 CGTTTTGGACCCCTAATAGGTGAAATCTACACCAATGACAC CGTTTTGGACCCCTAATAGGTAAAATCTACACCAATGACAC < 41bp 0.503793042686558 0.872311160537472 0.34270903 0.8063106 prediction 0.737036235701828 Functional Gain - PRDM1 ENSG00000057657 CDS Human protein_coding chr6:106543552 chr6:106543553 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19445 0 0 0 0 1 cytosol 0.438718592994267 0.438718592994896 0.6126212 0 hPsi_site_13169 iPseU_CNN:0.6126212;iRNA_PseU:0 13170 chr17 4927270 4927270 1 + G A COAD 4927269 + 4927249 4927289 41 CGATCCCGGGGAGCGGGTTCTGCACAGCCTGAACCCCAGCA CGATCCCGGGGAGCGGGTTCTACACAGCCTGAACCCCAGCA < 41bp 0.495470518874572 0.868516709339591 0.39506334 0.9256299 prediction 0.737033418679182 Functional Gain - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4927269 chr17:4927270 nonsynonymous SNV 0.033 0 22 hPsi_associated_SNPs_19446 0 0 1 0 0 Ribosome 0.438514029271748 0.438716919071957 0.8512598 0 hPsi_site_13170 iPseU_CNN:0.8512598;iRNA_PseU:0 13171 chr9 119461060 119461060 1 + G A HNSC 119461059 + 119461039 119461079 41 CCTGCTAAACAGCGGGGTCCTGAGGCAGCCTCCAATATCCA CCTGCTAAACAGCGGGGTCCTAAGGCAGCCTCCAATATCCA < 41bp 0.506984740332514 0.875489618202809 0.15635553 0.23003334 prediction 0.737009755740591 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461059 chr9:119461060 nonsynonymous SNV 0.853 2 22 hPsi_associated_SNPs_19447 0 0 1 0 0 chromatin 0.438718592574883 0.438718593017168 0 0 hPsi_site_13171 iPseU_CNN:0;iRNA_PseU:0 13172 chr1 150131362 150131362 1 + G A BLCA 150131361 + 150131341 150131381 41 CGCACCCTCCAGCTGCGGGCTGAGGAACCCCCAACCCCTGC CGCACCCTCCAGCTGCGGGCTAAGGAACCCCCAACCCCTGC < 41bp 0.488282757629741 0.868503415334896 0.3143177 0.48016617 prediction 0.737006830669792 Functional Gain - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131361 chr1:150131362 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_19448 0 0 0 0 0 Ribosome 0.438718592995074 0.438718592978338 0 0 hPsi_site_13172 iPseU_CNN:0;iRNA_PseU:0 13173 chr1 213146174 213146174 1 + G A STAD 213146173 + 213146153 213146193 41 CAAGAAGGTCAAGATTGGGCTGTACGTCCCCCATGAGCCTC CAAGAAGGTCAAGATTGGGCTATACGTCCCCCATGAGCCTC < 41bp 0.493031897802198 0.868494441472904 0.32219046 0.3502977 prediction 0.736988882945808 Functional Gain - VASH2 ENSG00000143494 CDS Human protein_coding chr1:213146173 chr1:213146174 synonymous SNV . 0 22 hPsi_associated_SNPs_19449 0 0 0 0 0 nucleoplasm 0.438718592995117 0.438718592994806 0 0 hPsi_site_13173 iPseU_CNN:0;iRNA_PseU:0 13174 chr22 41921257 41921257 1 + G A BRCA 41921256 + 41921236 41921276 41 AAGGACAGCAGCGGGCAGCATGTGGACGTGAGCCCCACCAG AAGGACAGCAGCGGGCAGCATATGGACGTGAGCCCCACCAG < 41bp 0.498227830571589 0.868470025442599 0.29857928 0.3129859 prediction 0.736940050885197 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41921256 chr22:41921257 nonsynonymous SNV 0.008 4 22 hPsi_associated_SNPs_19450 0 0 1 0 2 chromatin 0.438718602920074 0.438718592957295 0 0 hPsi_site_13174 iPseU_CNN:0;iRNA_PseU:0 13175 chr17 6014195 6014195 1 + G A CESC 6014194 + 6014174 6014214 41 ACATGGGCACGGCACCTCATTGAGCATGCCACTGGCTTCTA ACATGGGCACGGCACCTCATTAAGCATGCCACTGGCTTCTA < 41bp 0.515624949004985 0.884058230792602 0.26065812 0.4789403 prediction 0.736866563575233 Functional Gain - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6014194 chr17:6014195 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_19451 0 0 1 0 1 exosome 0.438718298706113 0.438718314956849 0 0 hPsi_site_13175 iPseU_CNN:0;iRNA_PseU:0 13176 chr19 11462747 11462747 1 + G A CESC 11462746 + 11462726 11462766 41 TCCACAGAAGCGCAGGAGGATGAGATCTCAGAGAACTTGGT TCCACAGAAGCGCAGGAGGATAAGATCTCAGAGAACTTGGT < 41bp 0.490066167455447 0.868429095649489 0.27316374 0.45522833 prediction 0.736858191298978 Functional Gain - CCDC159 ENSG00000183401 CDS Human protein_coding chr19:11462746 chr19:11462747 nonsynonymous SNV 0.684 3 22 hPsi_associated_SNPs_19452 0 0 0 0 2 exosome 0.438719284941222 0.438719098516459 0 0 hPsi_site_13176 iPseU_CNN:0;iRNA_PseU:0 13177 chr1 154315287 154315287 1 + G A CESC 154315286 + 154315266 154315306 41 TTTCAGAGGCCTGAACCTGTTGACTTCTCCTTCAATCCTCT TTTCAGAGGCCTGAACCTGTTAACTTCTCCTTCAATCCTCT < 41bp 0.49605287385335 0.868398766482026 0.381742 0.686104 prediction 0.736797532964052 Functional Gain - ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154315286 chr1:154315287 nonsynonymous SNV 0.904 3 22 hPsi_associated_SNPs_19453 0 0 1 0 1 chromatin 0.438922972146797 0.438740472003027 0.372208 0 hPsi_site_13177 iPseU_CNN:0.372208;iRNA_PseU:0 13178 chr18 61570417 61570417 1 + G A UCEC 61570416 + 61570396 61570436 41 GCAGCCGCTGGCACAGGAGGTGTTATGACAGGGAGAACTGG GCAGCCGCTGGCACAGGAGGTATTATGACAGGGAGAACTGG < 41bp 0.502262553923481 0.870657532813417 0.23831016 0.30328292 prediction 0.736789957779872 Functional Gain - SERPINB2 ENSG00000197632 CDS Human protein_coding chr18:61570416 chr18:61570417 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_19454 0 0 0 0 0 exosome 0.438718602275401 0.438719651928783 0 0 hPsi_site_13178 iPseU_CNN:0;iRNA_PseU:0 13179 chr16 77228945 77228945 1 + G A UCEC 77228944 + 77228924 77228964 41 TCTAATGCCTCATCAGCCAGTGCTCCTGCCTACAGCGTGCA TCTAATGCCTCATCAGCCAGTACTCCTGCCTACAGCGTGCA < 41bp 0.490658994652712 0.868378968708703 0.22291404 0.6335871 prediction 0.736757937417407 Functional Gain - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228944 chr16:77228945 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_19455 0 0 0 0 0 Ribosome 0.438718118296082 0.438703323618417 0.2671742 0 hPsi_site_13179 iPseU_CNN:0.2671742;iRNA_PseU:0 13180 chr1 153177365 153177365 1 + G A LUAD 153177364 + 153177344 153177384 41 CACCACCCAAGTGCCTGCCCTGCCCCTCGCAGTCTCCTTCA CACCACCCAAGTGCCTGCCCTACCCCTCGCAGTCTCCTTCA < 41bp 0.499277714705568 0.868372325432095 0.17259616 0.45256117 prediction 0.736744650864189 Functional Gain - LELP1 ENSG00000203784 CDS Human protein_coding chr1:153177364 chr1:153177365 nonsynonymous SNV 0.050 4 22 hPsi_associated_SNPs_19456 0 0 0 0 0 unknown 0.438718577368671 0.438718577663503 0 0 hPsi_site_13180 iPseU_CNN:0;iRNA_PseU:0 13181 chr12 13061744 13061744 1 + G A OV 13061743 + 13061723 13061763 41 GCTCACCTACGTCCTCTTCTTGATGGCGCTGACCTTCCTCA GCTCACCTACGTCCTCTTCTTAATGGCGCTGACCTTCCTCA < 41bp 0.491691137466123 0.868311989078259 0.26602423 0.41037413 prediction 0.736623978156518 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061743 chr12:13061744 synonymous SNV . 0 22 hPsi_associated_SNPs_19457 0 0 1 0 0 Nucleus 0.427954994774752 0.437255048228274 0 0 hPsi_site_13181 iPseU_CNN:0;iRNA_PseU:0 13182 chr1 110594455 110594455 1 + G A COAD 110594454 + 110594434 110594474 41 AGCAACATGAAGACCATGTCTGCCATCTACCAGAAGGTGCG AGCAACATGAAGACCATGTCTACCATCTACCAGAAGGTGCG < 41bp 0.497357193048441 0.868303891699732 0.23086274 0.30648267 prediction 0.736607783399463 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110594454 chr1:110594455 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19458 0 0 0 0 1 Cytosol 0.438446611061764 0.438550852198484 0 0 hPsi_site_13182 iPseU_CNN:0;iRNA_PseU:0 13183 chr2 120005560 120005560 1 + G A UCEC 120005559 + 120005539 120005579 41 GCCGTGCGTGGCCTACGTGCTGCTGTCACTCGTGTACTTGC GCCGTGCGTGGCCTACGTGCTACTGTCACTCGTGTACTTGC < 41bp 0.48228022593861 0.868295884075394 0.5686618 0.965154 prediction 0.736591768150787 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005559 chr2:120005560 synonymous SNV . 0 22 hPsi_associated_SNPs_19459 0 0 1 0 0 Ribosome 0.469389039209043 0.422069335103737 0.7929844 0 hPsi_site_13183 iPseU_CNN:0.7929844;iRNA_PseU:0 13184 chr22 20939400 20939400 1 + G A rs61741073 20939399 + 20939379 20939419 41 CCTCCCCAGGGCCCCAGTGGTGTGCACCCGGAAGCGCAGGC CCTCCCCAGGGCCCCAGTGGTATGCACCCGGAAGCGCAGGC < 41bp 0.498274854674272 0.868265759520443 0.2931851 0.6162043 prediction 0.736531519040886 Functional Gain - MED15 ENSG00000099917 CDS Human protein_coding chr22:20939399 chr22:20939400 synonymous SNV . 0 22 hPsi_associated_SNPs_19460 0 0 1 0 1 Cytosol 0.438726785684073 0.438721094617031 0.2324086 0 hPsi_site_13184 iPseU_CNN:0.2324086;iRNA_PseU:0 13185 chr16 30409537 30409537 1 + G A LGG 30409536 + 30409516 30409556 41 ATCCGACCTGGTGAAGCACCTGCGGGTGCACACGGGTGAGA ATCCGACCTGGTGAAGCACCTACGGGTGCACACGGGTGAGA < 41bp 0.502272000094281 0.870537190939996 0.28734994 0.43951258 prediction 0.736530381691431 Functional Gain - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409536 chr16:30409537 synonymous SNV . 0 22 hPsi_associated_SNPs_19461 0 0 1 0 0 Ribosome 0.441777100994791 0.431974825048107 0 0 hPsi_site_13185 iPseU_CNN:0;iRNA_PseU:0 13186 chr16 1837974 1837974 1 + G A HNSC 1837973 + 1837953 1837993 41 GGGGGACGTGAGGCGCGAGCTGACCTTCTGTAGGAAGACGG GGGGGACGTGAGGCGCGAGCTAACCTTCTGTAGGAAGACGG < 41bp 0.500101614064994 0.868359026929787 0.16930377 0.2720091 prediction 0.736514825729585 Functional Gain - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1837973 chr16:1837974 synonymous SNV . 0 22 hPsi_associated_SNPs_19462 0 0 1 0 2 Ribosome 0.438718593517587 0.438718588397354 0 0 hPsi_site_13186 iPseU_CNN:0;iRNA_PseU:0 13187 chr14 59113377 59113377 1 + G A SKCM 59113376 + 59113356 59113396 41 AGCGAACTGACTACCGGCGGTGGAAGTCCTCGGCCGAGATT AGCGAACTGACTACCGGCGGTAGAAGTCCTCGGCCGAGATT < 41bp 0.497248484461363 0.868249102488721 0.78938264 0.877445 prediction 0.736498204977441 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113376 chr14:59113377 stopgain 0.111 1 22 hPsi_associated_SNPs_19463 0 0 0 0 0 exosome 0.438718592140174 0.438718590490691 0.17612472 0 hPsi_site_13187 iPseU_CNN:0.17612472;iRNA_PseU:0 13188 chr1 11766464 11766464 1 + G A SKCM 11766463 + 11766443 11766483 41 ACCTCCCAGGCCCAGCGCTGTGGACGCCTCAGGCCAGCCAC ACCTCCCAGGCCCAGCGCTGTAGACGCCTCAGGCCAGCCAC < 41bp 0.486467638091175 0.868245414139902 0.36315703 0.74971557 prediction 0.736490828279804 Functional Gain - DRAXIN ENSG00000162490 CDS Human protein_coding chr1:11766463 chr1:11766464 stopgain 0.059 1 22 hPsi_associated_SNPs_19464 0 0 0 0 0 exosome 0.438718592999885 0.438714047821727 0.49943114 0 hPsi_site_13188 iPseU_CNN:0.49943114;iRNA_PseU:0 13189 chr19 36029291 36029291 1 + G A rs2285514 36029290 + 36029270 36029310 41 GCTGTGAATGATCCATTCATTGACCCGGAATACATGGTCAG GCTGTGAATGATCCATTCATTAACCCGGAATACATGGTCAG < 41bp 0.506079112468593 0.874309616512175 0.32932574 0.4664636 prediction 0.736461008087164 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36029290 chr19:36029291 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_19465 0 0 0 0 2 chromatin 0.43498166710183 0.438605351887851 0 0 hPsi_site_13189 iPseU_CNN:0;iRNA_PseU:0 13190 chr19 47823394 47823394 1 + G A COAD 47823393 + 47823373 47823413 41 CTCCCTCATCCTGCTCAACATGTACGCCAGCATCCTGCTCC CTCCCTCATCCTGCTCAACATATACGCCAGCATCCTGCTCC < 41bp 0.4980010787745 0.868225379064781 0.33652505 0.65650636 prediction 0.736450758129562 Functional Gain - C5AR1 ENSG00000197405 CDS Human protein_coding chr19:47823393 chr19:47823394 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19466 0 0 0 0 0 chromatin 0.438730396878507 0.438716171216799 0.31301272 0 hPsi_site_13190 iPseU_CNN:0.31301272;iRNA_PseU:0 13191 chr12 52312854 52312854 1 + G A SKCM 52312853 + 52312833 52312873 41 CATGAAGAAGGTGGTGTGTGTGGATCAGCAGACCCCCACCA CATGAAGAAGGTGGTGTGTGTAGATCAGCAGACCCCCACCA < 41bp 0.503650673402521 0.871869115733718 0.33624882 0.73041946 prediction 0.736436884662394 Functional Gain - ACVRL1 ENSG00000139567 CDS Human protein_coding chr12:52312853 chr12:52312854 synonymous SNV . 0 22 hPsi_associated_SNPs_19467 0 0 0 0 2 Endoplasmic reticulum 0.438695729273153 0.438720941305537 0.46083892 0 hPsi_site_13191 iPseU_CNN:0.46083892;iRNA_PseU:0 13192 chr1 166962009 166962009 1 + G A SKCM 166962008 + 166961988 166962028 41 GAACAGCGCTTCCTCCCTTGTGAAATTGGCTGTGTTAAGTA GAACAGCGCTTCCTCCCTTGTAAAATTGGCTGTGTTAAGTA < 41bp 0.505169607653781 0.873381286307545 0.28869003 0.3428125 prediction 0.736423357307526 Functional Gain - MAEL ENSG00000143194 CDS Human protein_coding chr1:166962008 chr1:166962009 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19468 0 0 0 1 2 exosome 0.438718842948108 0.438718594534617 0 0 hPsi_site_13192 iPseU_CNN:0;iRNA_PseU:0 13193 chr19 48967783 48967783 1 + G A BLCA 48967782 + 48967762 48967802 41 CGCCACTTCCATCGCACTTATGAGGTCCCAGGGACACCGGT CGCCACTTCCATCGCACTTATAAGGTCCCAGGGACACCGGT < 41bp 0.497244223978928 0.868201385210278 0.32137597 0.32829946 prediction 0.736402770420555 Functional Gain - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967782 chr19:48967783 nonsynonymous SNV 0.949 3 22 hPsi_associated_SNPs_19469 0 0 1 0 0 chromatin 0.438698675591436 0.438719735194314 0 0 hPsi_site_13193 iPseU_CNN:0;iRNA_PseU:0 13194 chr17 6913367 6913367 1 + G A COAD 6913366 + 6913346 6913386 41 TGTGACGATGGCCACAGTGATGGGGTCACTACCTGATGTCC TGTGACGATGGCCACAGTGATAGGGTCACTACCTGATGTCC < 41bp 0.482632034155799 0.868166924169253 0.2876926 0.39600465 prediction 0.736333848338506 Functional Gain - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6913366 chr17:6913367 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_19470 0 0 0 0 2 Cytosol 0.43868778544468 0.438802015641094 0 0 hPsi_site_13194 iPseU_CNN:0;iRNA_PseU:0 13195 chr11 57947670 57947670 1 + G A LAML 57947669 + 57947649 57947689 41 ACTGCTGTGTCACTCTTCTTTGGTACCCTCATCTTCATGTA ACTGCTGTGTCACTCTTCTTTAGTACCCTCATCTTCATGTA < 41bp 0.49718597948506 0.868145345027413 0.23424733 0.27587894 prediction 0.736290690054825 Functional Gain - OR9Q1 ENSG00000186509 CDS Human protein_coding chr11:57947669 chr11:57947670 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_19471 0 0 0 0 0 nucleus 0.438724716345273 0.438777466026571 0 0 hPsi_site_13195 iPseU_CNN:0;iRNA_PseU:0 13196 chr1 207867838 207867838 1 + G A LUAD 207867837 + 207867817 207867857 41 AAGGTGTTTGAGCTTGTGGGTGAGCCCTCCATATACTGCAC AAGGTGTTTGAGCTTGTGGGTAAGCCCTCCATATACTGCAC < 41bp 0.497066507975476 0.868133793359537 0.28012234 0.7617556 prediction 0.736267586719075 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207867837 chr1:207867838 nonsynonymous SNV 0.011 2 22 hPsi_associated_SNPs_19472 0 0 0 1 0 Endoplasmic reticulum 0.438718575143305 0.438718585170616 0.5235112 0 hPsi_site_13196 iPseU_CNN:0.5235112;iRNA_PseU:0 13197 chrX 150869049 150869049 1 + G A LUSC 150869048 + 150869028 150869068 41 CTCGCAGAGCTCAGATGCCATGTATGTGGTGGTACCCCTTC CTCGCAGAGCTCAGATGCCATATATGTGGTGGTACCCCTTC < 41bp 0.496011201705058 0.868129472838983 0.27352065 0.31910253 prediction 0.736258945677965 Functional Gain - PRRG3 ENSG00000130032 CDS Human protein_coding chrX:150869048 chrX:150869049 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19473 0 0 0 0 1 exosome 0.438900588797256 0.438794663418586 0 0 hPsi_site_13197 iPseU_CNN:0;iRNA_PseU:0 13198 chr11 66263137 66263137 1 + G A THCA 66263136 + 66263116 66263156 41 GGGGGCTGATGCGGAGGACGTGATCTACGTGAACTGGCTCA GGGGGCTGATGCGGAGGACGTAATCTACGTGAACTGGCTCA < 41bp 0.513176384618643 0.881305305621686 0.3808219 0.82447034 prediction 0.736257842006086 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66263136 chr11:66263137 synonymous SNV . 0 22 hPsi_associated_SNPs_19474 0 0 1 0 2 Nucleus 0.429209882065461 0.438639412974162 0.64894068 0 hPsi_site_13198 iPseU_CNN:0.64894068;iRNA_PseU:0 13199 chr6 17292288 17292288 1 + G A UCEC 17292287 + 17292267 17292307 41 GCCGCCGCCGCTGCAGCAGCTGCTGCCGCTGCAGCATTTGG GCCGCCGCCGCTGCAGCAGCTACTGCCGCTGCAGCATTTGG < 41bp 0.494661044553451 0.86811958251234 0.35741037 0.7363676 prediction 0.736239165024679 Functional Gain - RBM24 ENSG00000112183 CDS Human protein_coding chr6:17292287 chr6:17292288 nonsynonymous SNV 0.039 3 22 hPsi_associated_SNPs_19475 0 0 0 0 0 cytosol 0.438718419708903 0.438797072496638 0.4727352 0 hPsi_site_13199 iPseU_CNN:0.4727352;iRNA_PseU:0 13200 chr6 108499328 108499328 1 + G A PAAD 108499327 + 108499307 108499347 41 TGAAGTGAATGGGACCCCAATGTATCTCTATGAAGTGGCCA TGAAGTGAATGGGACCCCAATATATCTCTATGAAGTGGCCA < 41bp 0.491119099580304 0.868116413201593 0.26128495 0.27744067 prediction 0.736232826403186 Functional Gain - NR2E1 ENSG00000112333 CDS Human protein_coding chr6:108499327 chr6:108499328 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19476 0 0 1 0 1 exosome 0.438724305212539 0.438745529796838 0 0 hPsi_site_13200 iPseU_CNN:0;iRNA_PseU:0 13201 chr20 31651456 31651456 1 + G A UCEC 31651455 + 31651435 31651475 41 GGACAGTGTGCTGGGTGTGGTGAATGAGCTCCTGGGGGCTG GGACAGTGTGCTGGGTGTGGTAAATGAGCTCCTGGGGGCTG < 41bp 0.505147708581479 0.873245617011967 0.28352243 0.6941442 prediction 0.736195816860977 Functional Gain - BPIFB3 ENSG00000186190 CDS Human protein_coding chr20:31651455 chr20:31651456 synonymous SNV . 0 22 hPsi_associated_SNPs_19477 0 0 0 0 2 exosome 0.438722971063324 0.438718674181257 0.3882884 0 hPsi_site_13201 iPseU_CNN:0.3882884;iRNA_PseU:0 13202 chr3 184101126 184101126 1 + G A HNSC 184101125 + 184101105 184101145 41 CAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCA CAAAGTGTCCTTTGTGGGGCTAATGCCCTGATCCCAGTCCA < 41bp 0.504521436687707 0.872611933126778 0.25703347 0.4822096 prediction 0.736180992878143 Functional Gain - CHRD ENSG00000090539 CDS Human protein_coding chr3:184101125 chr3:184101126 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19478 0 0 1 0 2 nucleus 0.438718592991944 0.438718592950649 0 0 hPsi_site_13202 iPseU_CNN:0;iRNA_PseU:0 13203 chr17 40947953 40947953 1 + G A BLCA 40947952 + 40947932 40947972 41 CCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCC CCATCCCAGCCCAGTGTGGATAAACTACTCCTACAGCAGCC < 41bp 0.508635780054757 0.876715205827283 0.2898813 0.6466561 prediction 0.736158851545053 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947952 chr17:40947953 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19479 0 0 1 0 1 chromatin 0.438718592995044 0.438718593003519 0.2933122 0 hPsi_site_13203 iPseU_CNN:0.2933122;iRNA_PseU:0 13204 chr8 17401058 17401058 1 + G A rs141387723 17401057 + 17401037 17401077 41 CTCGGGCCCCAGCATCGTGGTGTCCTTCCTCATTGCTGCCC CTCGGGCCCCAGCATCGTGGTATCCTTCCTCATTGCTGCCC < 41bp 0.481364138732377 0.868067014090046 0.34239712 0.83063054 prediction 0.736134028180092 Functional Gain - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17401057 chr8:17401058 synonymous SNV . 0 22 hPsi_associated_SNPs_19480 0 0 1 0 0 Ribosome 0.438718550935678 0.438718612127306 0.66126108 0 hPsi_site_13204 iPseU_CNN:0.66126108;iRNA_PseU:0 13205 chr10 133758884 133758884 1 + G A COAD 133758883 + 133758863 133758903 41 CCACCCGCACCAGTGCAACGTGTTCGTCTACAGCAGTAGCA CCACCCGCACCAGTGCAACGTATTCGTCTACAGCAGTAGCA < 41bp 0.486331355068029 0.868060346144982 0.30353904 0.56246024 prediction 0.736120692289964 Functional Gain - PPP2R2D ENSG00000175470 CDS Human protein_coding chr10:133758883 chr10:133758884 synonymous SNV . 0 22 hPsi_associated_SNPs_19481 0 0 1 0 1 chromatin 0.438696164577842 0.438730655560639 0.12492048 0 hPsi_site_13205 iPseU_CNN:0.12492048;iRNA_PseU:0 13206 chr18 74980625 74980625 1 + G A SKCM 74980624 + 74980604 74980644 41 ATCCATCTCTGGGCTGAGTTTGGAGTTTTCCCGCTGACGCC ATCCATCTCTGGGCTGAGTTTAGAGTTTTCCCGCTGACGCC < 41bp 0.5046427967195 0.872699328005505 0.3445567 0.68569434 prediction 0.736113062572011 Functional Gain - GALR1 ENSG00000166573 CDS Human protein_coding chr18:74980624 chr18:74980625 nonsynonymous SNV 0.281 4 22 hPsi_associated_SNPs_19482 0 0 0 0 1 exosome 0.438718592995102 0.438718593137022 0.37138868 0 hPsi_site_13206 iPseU_CNN:0.37138868;iRNA_PseU:0 13207 chr16 30679940 30679940 1 + G A KIRC 30679939 + 30679919 30679959 41 GCCCTCTCCAACGGGGCCTTTGGAGGCCTGGGCAGCCCCAC GCCCTCTCCAACGGGGCCTTTAGAGGCCTGGGCAGCCCCAC < 41bp 0.511791727206777 0.879844172093005 0.22557482 0.3518052 prediction 0.736104889772455 Functional Gain - FBRS ENSG00000156860 CDS Human protein_coding chr16:30679939 chr16:30679940 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19483 0 0 1 0 2 chromatin 0.438718538300819 0.438718586923395 0 0 hPsi_site_13207 iPseU_CNN:0;iRNA_PseU:0 13208 chr1 16376365 16376365 1 + G A SKCM 16376364 + 16376344 16376384 41 TTCTGTCAGCGAATCTTCTTTGGCTTCATCAGGAACAATAG TTCTGTCAGCGAATCTTCTTTAGCTTCATCAGGAACAATAG < 41bp 0.505944561760122 0.873989626840216 0.30255258 0.5172911 prediction 0.736090130160188 Functional Gain - CLCNKB ENSG00000184908 CDS Human protein_coding chr1:16376364 chr1:16376365 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_19484 0 0 0 0 2 exosome 0.438718509358892 0.438718591606461 0.0345822 0 hPsi_site_13208 iPseU_CNN:0.0345822;iRNA_PseU:0 13209 chr12 67699672 67699672 1 + G A LAML 67699671 + 67699651 67699691 41 CTCAATGAACTTATTGGACTTGTGAGATCACCCTTATTGCA CTCAATGAACTTATTGGACTTATGAGATCACCCTTATTGCA < 41bp 0.493286696675695 0.868032232058318 0.2799089 0.29845953 prediction 0.736064464116637 Functional Gain - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699671 chr12:67699672 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19485 0 0 1 0 0 Nucleus 0.438545580983303 0.438249447846897 0 0 hPsi_site_13209 iPseU_CNN:0;iRNA_PseU:0 13210 chr8 22414410 22414410 1 + G A UCEC 22414409 + 22414389 22414429 41 GACGAGAGCGGCATGCCCATTGCCCCCCGATCCGTGAGTCC GACGAGAGCGGCATGCCCATTACCCCCCGATCCGTGAGTCC < 41bp 0.502015518698888 0.870046155370006 0.19321254 0.44151834 prediction 0.736061273342235 Functional Gain - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22414409 chr8:22414410 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_19486 0 0 1 0 1 Cytosol 0.438719562703807 0.43872241235148 0 0 hPsi_site_13210 iPseU_CNN:0;iRNA_PseU:0 13211 chr14 23239726 23239726 1 + G A STAD 23239725 + 23239705 23239745 41 AGAGATGGCCAACCTTCCTGTGCCCAGCCTGCAGACAGGTG AGAGATGGCCAACCTTCCTGTACCCAGCCTGCAGACAGGTG < 41bp 0.519799567579141 0.887827269873771 0.22568583 0.63023114 prediction 0.736055404589261 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239725 chr14:23239726 synonymous SNV . 0 22 hPsi_associated_SNPs_19487 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592995103 0.26046228 0 hPsi_site_13211 iPseU_CNN:0.26046228;iRNA_PseU:0 13212 chr20 33764182 33764182 1 + G A UCEC 33764181 + 33764161 33764201 41 CAACCGCACTCGGTATGAACTGCGGGAATTCCTGGAGGACA CAACCGCACTCGGTATGAACTACGGGAATTCCTGGAGGACA < 41bp 0.504695265804407 0.872713213453719 0.49154902 0.5827199 prediction 0.736035895298623 Functional Gain - PROCR ENSG00000101000 CDS Human protein_coding chr20:33764181 chr20:33764182 synonymous SNV . 0 22 hPsi_associated_SNPs_19488 0 0 1 0 1 Endoplasmic reticulum 0.438938209040355 0.438144005623662 0.1654398 0 hPsi_site_13212 iPseU_CNN:0.1654398;iRNA_PseU:0 13213 chr19 12975694 12975694 1 + G A SKCM 12975693 + 12975673 12975713 41 ATGGCCCGCATGTACTTTGCTGAGACGGTGCTAGCCCTGGA ATGGCCCGCATGTACTTTGCTAAGACGGTGCTAGCCCTGGA < 41bp 0.487913755933378 0.868003901129609 0.19050866 0.3998168 prediction 0.736007802259219 Functional Gain - MAST1 ENSG00000105613 CDS Human protein_coding chr19:12975693 chr19:12975694 nonsynonymous SNV 0.006 4 22 hPsi_associated_SNPs_19489 0 0 0 0 2 Endoplasmic reticulum 0.438718686628081 0.438718554812324 0 0 hPsi_site_13213 iPseU_CNN:0;iRNA_PseU:0 13214 chr7 128489519 128489519 1 + G A GBM 128489518 + 128489498 128489538 41 GAGCTCGATGTGGATGTGGTTGAGAACCATGACGGTACCTT GAGCTCGATGTGGATGTGGTTAAGAACCATGACGGTACCTT < 41bp 0.500065170104862 0.868060007158868 0.36058986 0.6716698 prediction 0.735989674108013 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128489518 chr7:128489519 nonsynonymous SNV 0.790 5 22 hPsi_associated_SNPs_19490 0 0 0 0 0 chromatin 0.410809235928314 0.438711512855617 0.3433396 0 hPsi_site_13214 iPseU_CNN:0.3433396;iRNA_PseU:0 13215 chr7 45108125 45108125 1 + G A LUAD 45108124 + 45108104 45108144 41 GCAGGCTCCCTGTCGGAGAGTGCAGTTGGGCCCGTGGAGGC GCAGGCTCCCTGTCGGAGAGTACAGTTGGGCCCGTGGAGGC < 41bp 0.514300410566801 0.882280263138226 0.22577712 0.41038227 prediction 0.73595970514285 Functional Gain - CCM2 ENSG00000136280 CDS Human protein_coding chr7:45108124 chr7:45108125 nonsynonymous SNV 0.955 0 22 hPsi_associated_SNPs_19491 0 0 0 0 2 Ribosome 0.438718574585238 0.438718713324534 0 0 hPsi_site_13215 iPseU_CNN:0;iRNA_PseU:0 13216 chr9 4844556 4844556 1 + G A HNSC 4844555 + 4844535 4844575 41 TTTGGGTTGTCACTGGTTGCTGAGACCACCAGTGGCACCTT TTTGGGTTGTCACTGGTTGCTAAGACCACCAGTGGCACCTT < 41bp 0.494233393102343 0.867973715897601 0.1894885 0.25894445 prediction 0.735947431795202 Functional Gain - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4844555 chr9:4844556 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19492 0 0 1 0 1 Cytosol 0.43871859236279 0.438718592953793 0 0 hPsi_site_13216 iPseU_CNN:0;iRNA_PseU:0 13217 chr8 97311995 97311995 1 + G A LUAD 97311994 + 97311974 97312014 41 TCATTCTGGACATCCTGTTGTGCAATGGCGGTGGCATTTGG TCATTCTGGACATCCTGTTGTACAATGGCGGTGGCATTTGG < 41bp 0.514004231727651 0.88196936967409 0.28266355 0.30327928 prediction 0.735930275892877 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97311994 chr8:97311995 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_19493 0 0 1 0 2 Ribosome 0.439138298393281 0.438513406729261 0 0 hPsi_site_13217 iPseU_CNN:0;iRNA_PseU:0 13218 chr1 38171195 38171195 1 + G A LUAD 38171194 + 38171174 38171214 41 GGGAATGGCAGCCCTCTTGCTGACAGCAAAGAGATCTTCCT GGGAATGGCAGCCCTCTTGCTAACAGCAAAGAGATCTTCCT < 41bp 0.50996774310192 0.877924164491446 0.27132338 0.39184967 prediction 0.735912842779053 Functional Gain - CDCA8 ENSG00000134690 CDS Human protein_coding chr1:38171194 chr1:38171195 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_19494 0 0 1 0 0 Ribosome 0.438718193382819 0.438718585982767 0 0 hPsi_site_13218 iPseU_CNN:0;iRNA_PseU:0 13219 chr11 294101 294101 1 + G A rs146751351 294100 + 294080 294120 41 GCTGCCCTTGCCCCTGCAGGTGTGGACGGAGAATGCAGACG GCTGCCCTTGCCCCTGCAGGTATGGACGGAGAATGCAGACG < 41bp 0.512281395410209 0.88022791027958 0.2252292 0.36581236 prediction 0.735893029738742 Functional Gain - PGGHG ENSG00000142102 CDS Human protein_coding chr11:294100 chr11:294101 synonymous SNV . 0 22 hPsi_associated_SNPs_19495 0 0 1 0 2 unknown 0.438719253994962 0.438721523481196 0 0 hPsi_site_13219 iPseU_CNN:0;iRNA_PseU:0 13220 chrX 47058963 47058963 1 + G A rs781887272 47058962 + 47058942 47058982 41 GAGCTCAACAGCTATGTGCCTGTCACTGCCTACACTGGACC GAGCTCAACAGCTATGTGCCTATCACTGCCTACACTGGACC < 41bp 0.484750728028616 0.867915756956399 0.28854915 0.66943663 prediction 0.735831513912798 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47058962 chrX:47058963 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19496 1 0 1 0 2 Nucleus 0.438699292002894 0.438735295213541 0.33887326 0 hPsi_site_13220 iPseU_CNN:0.33887326;iRNA_PseU:0 13221 chr19 36349402 36349402 1 + G A BLCA 36349401 + 36349381 36349421 41 CTAGAGGATGAAGCATCATATGAATGTCAGGCTACACAAGC CTAGAGGATGAAGCATCATATAAATGTCAGGCTACACAAGC < 41bp 0.480347469906737 0.867914202229278 0.22477987 0.30515978 prediction 0.735828404458555 Functional Gain - KIRREL2 ENSG00000126259 CDS Human protein_coding chr19:36349401 chr19:36349402 nonsynonymous SNV 0.924 4 22 hPsi_associated_SNPs_19497 0 0 0 0 1 exosome 0.43905526233437 0.438420436374659 0 0 hPsi_site_13221 iPseU_CNN:0;iRNA_PseU:0 13222 chr4 8230025 8230025 1 + G A SKCM 8230024 + 8230004 8230044 41 GGAGGGCGTGATTGCCAACATGGTGGCCGTGGCTCTGAAGA GGAGGGCGTGATTGCCAACATAGTGGCCGTGGCTCTGAAGA < 41bp 0.499176263094957 0.867886306230144 0.21317098 0.36901224 prediction 0.735772612460288 Functional Gain - SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8230024 chr4:8230025 nonsynonymous SNV 0.068 2 22 hPsi_associated_SNPs_19498 0 0 1 0 0 cytosol 0.438718592577622 0.438754926822553 0 0 hPsi_site_13222 iPseU_CNN:0;iRNA_PseU:0 13223 chr1 1956796 1956796 1 + G A UCEC 1956795 + 1956775 1956815 41 CCCCCCGTGAATGTGGCCCTTGCCCTGGAGGTGGCCAGCAT CCCCCCGTGAATGTGGCCCTTACCCTGGAGGTGGCCAGCAT < 41bp 0.501156380479531 0.869020066440293 0.1690562 0.27079546 prediction 0.735727371921524 Functional Gain - GABRD ENSG00000187730 CDS Human protein_coding chr1:1956795 chr1:1956796 nonsynonymous SNV 0.595 1 22 hPsi_associated_SNPs_19499 0 0 0 0 2 Cytosol 0.438718504968893 0.438723827485297 0 0 hPsi_site_13223 iPseU_CNN:0;iRNA_PseU:0 13224 chr12 113723740 113723740 1 + G A SKCM 113723739 + 113723719 113723759 41 GGTTGCCGGCCTGGGCCCTGTGGAGTACTTGTCTTCCGGAT GGTTGCCGGCCTGGGCCCTGTAGAGTACTTGTCTTCCGGAT < 41bp 0.478248971947959 0.867860132857291 0.38230994 0.76894534 prediction 0.735720265714582 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113723739 chr12:113723740 synonymous SNV . 0 22 hPsi_associated_SNPs_19500 0 0 1 0 2 chromatin 0.438718593138532 0.438718560595616 0.53789068 0 hPsi_site_13224 iPseU_CNN:0.53789068;iRNA_PseU:0 13225 chr7 129096387 129096387 1 + G A PAAD 129096386 + 129096366 129096406 41 TATCCAGGTGGTGAAGAGCATGCGTGCTGCCTCCCCGCCCT TATCCAGGTGGTGAAGAGCATACGTGCTGCCTCCCCGCCCT < 41bp 0.514647456894632 0.882501310127784 0.4001367 0.67638016 prediction 0.735707706466305 Functional Gain - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096386 chr7:129096387 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19501 0 0 1 0 0 Nucleus 0.438718308257402 0.43872052388417 0.35276032 0 hPsi_site_13225 iPseU_CNN:0.35276032;iRNA_PseU:0 13226 chr14 24530189 24530189 1 + G A UCEC 24530188 + 24530168 24530208 41 GCTGGCCAATGATGGGCCTGTGCGGCAGAGGCTGGAATCAG GCTGGCCAATGATGGGCCTGTACGGCAGAGGCTGGAATCAG < 41bp 0.488308295359072 0.867834135932381 0.22063887 0.78159726 prediction 0.735668271864762 Functional Gain - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24530188 chr14:24530189 synonymous SNV . 0 22 hPsi_associated_SNPs_19502 0 0 0 0 1 Endoplasmic reticulum 0.438718919007335 0.440251164469687 0.56319452 0 hPsi_site_13226 iPseU_CNN:0.56319452;iRNA_PseU:0 13227 chr14 21464875 21464875 1 + G A LGG 21464874 + 21464854 21464894 41 GCCCGCCGGCACGGCAGGTATGGGGGGTGTGACCAAAATCA GCCCGCCGGCACGGCAGGTATAGGGGGTGTGACCAAAATCA < 41bp 0.499579358528248 0.867819709808293 0.26396033 0.57546747 prediction 0.735639419616586 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464874 chr14:21464875 nonsynonymous SNV 0.043 0 22 hPsi_associated_SNPs_19503 0 0 1 0 0 Ribosome 0.438717451099387 0.438718592827278 0.15093494 0 hPsi_site_13227 iPseU_CNN:0.15093494;iRNA_PseU:0 13228 chr4 139964425 139964425 1 + G A HNSC 139964424 + 139964404 139964444 41 CCCCGGTTCCAGAGGGATTTTGTGGATCTGAGGACAGATTG CCCCGGTTCCAGAGGGATTTTATGGATCTGAGGACAGATTG < 41bp 0.484212657318473 0.867790798530201 0.27963397 0.34804463 prediction 0.735581597060402 Functional Gain - NOCT ENSG00000151014 CDS Human protein_coding chr4:139964424 chr4:139964425 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19504 0 0 0 0 1 chromatin 0.438717622482262 0.438718640442725 0 0 hPsi_site_13228 iPseU_CNN:0;iRNA_PseU:0 13229 chr11 63971036 63971036 1 + G A LUAD 63971035 + 63971015 63971055 41 GAGGTGCAGCAGATCATGAGTGACCCAGCCATGCGCCTTAT GAGGTGCAGCAGATCATGAGTAACCCAGCCATGCGCCTTAT < 41bp 0.486722361084887 0.867787905742385 0.33463386 0.46897432 prediction 0.735575811484771 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63971035 chr11:63971036 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19505 0 0 1 0 1 Ribosome 0.43872063660432 0.444816688456905 0 0 hPsi_site_13229 iPseU_CNN:0;iRNA_PseU:0 13230 chr17 16338243 16338243 1 + G A UCEC 16338242 + 16338222 16338262 41 GGCTTCATGGGAGCAGACGCTGCCTACGCTGTGTGAGGACC GGCTTCATGGGAGCAGACGCTACCTACGCTGTGTGAGGACC < 41bp 0.484619297903175 0.867785426993671 0.37704524 0.7445272 prediction 0.735570853987341 Functional Gain - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16338242 chr17:16338243 nonsynonymous SNV 0.772 1 22 hPsi_associated_SNPs_19506 0 0 0 0 1 Endoplasmic reticulum 0.43799696567456 0.438359875011201 0.4890544 0 hPsi_site_13230 iPseU_CNN:0.4890544;iRNA_PseU:0 13231 chr9 119461766 119461766 1 + G A UCEC 119461765 + 119461745 119461785 41 TCCGCTGCATTGCTGGCATGTGTGTGGATGCTCGTGGTGAT TCCGCTGCATTGCTGGCATGTATGTGGATGCTCGTGGTGAT < 41bp 0.49950525561024 0.867783509568185 0.38383958 0.7396692 prediction 0.73556701913637 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461765 chr9:119461766 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_19507 0 0 1 0 0 chromatin 0.433933273433707 0.435862798734167 0.4793384 0 hPsi_site_13231 iPseU_CNN:0.4793384;iRNA_PseU:0 13232 chr12 132400481 132400481 1 + G A SKCM 132400480 + 132400460 132400500 41 CCCGCACTTCCGGGCTGGGCTGCCGCCTGCACAGCGCCCCC CCCGCACTTCCGGGCTGGGCTACCGCCTGCACAGCGCCCCC < 41bp 0.491737892777029 0.867777697664582 0.21355909 0.3414985 prediction 0.735555395329165 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132400480 chr12:132400481 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_19508 0 0 1 0 1 Cytosol 0.43871879386539 0.438719550817212 0 0 hPsi_site_13232 iPseU_CNN:0;iRNA_PseU:0 13233 chr11 64879032 64879032 1 + G A LUAD 64879031 + 64879011 64879051 41 TGTGCCCATGGAGCCCAGTGTGGTTGAGGTCATCTGCGAGC TGTGCCCATGGAGCCCAGTGTAGTTGAGGTCATCTGCGAGC < 41bp 0.495909852779356 0.867775875885566 0.6520163 0.95161074 prediction 0.735551751771133 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64879031 chr11:64879032 synonymous SNV . 0 22 hPsi_associated_SNPs_19509 0 0 1 0 0 Ribosome 0.43871859198452 0.438662543274834 0.59918888 0 hPsi_site_13233 iPseU_CNN:0.59918888;iRNA_PseU:0 13234 chr3 13670715 13670715 1 + G A COAD 13670714 + 13670694 13670734 41 GCTGCGGTGAGGGCCAAGTGTGCCACAACCTCCCTGGCTCC GCTGCGGTGAGGGCCAAGTGTACCACAACCTCCCTGGCTCC < 41bp 0.517074783220806 0.884838457759616 0.6758254 0.88575685 prediction 0.73552734907762 Functional Gain - FBLN2 ENSG00000163520 CDS Human protein_coding chr3:13670714 chr3:13670715 nonsynonymous SNV 0.814 5 22 hPsi_associated_SNPs_19510 0 0 0 0 2 Endoplasmic reticulum 0.438716874040847 0.438714375683713 0.4198629 0 hPsi_site_13234 iPseU_CNN:0.4198629;iRNA_PseU:0 13235 chr14 75471550 75471550 1 + G A UCEC 75471549 + 75471529 75471569 41 GAGGCCTTCCTCAAAGAGGCTGCCCGAAAGAGGAAATTCCA GAGGCCTTCCTCAAAGAGGCTACCCGAAAGAGGAAATTCCA < 41bp 0.508778792893715 0.876531867479303 0.17786309 0.30008504 prediction 0.735506149171176 Functional Gain - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75471549 chr14:75471550 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_19511 0 0 1 0 1 Ribosome 0.43871859308248 0.438718576302298 0 0 hPsi_site_13235 iPseU_CNN:0;iRNA_PseU:0 13236 chr16 67701881 67701881 1 + G A LUSC 67701880 + 67701860 67701900 41 GAGCCAGAGGACAGCCAGAGTGAGCCCTCACCATCTGCCAA GAGCCAGAGGACAGCCAGAGTAAGCCCTCACCATCTGCCAA < 41bp 0.492060263549971 0.867746770997004 0.297126 0.5970673 prediction 0.735493541994009 Functional Gain - C16orf86 ENSG00000159761 CDS Human protein_coding chr16:67701880 chr16:67701881 nonsynonymous SNV 0.727 1 22 hPsi_associated_SNPs_19512 0 0 0 1 0 exosome 0.438751675658698 0.438978775126546 0.1941346 0 hPsi_site_13236 iPseU_CNN:0.1941346;iRNA_PseU:0 13237 chr12 68051053 68051053 1 + G A CESC 68051052 + 68051032 68051072 41 CAAAACGGGCTTGCCAGTGGTGCCAGAGCGGCAGCTGGACA CAAAACGGGCTTGCCAGTGGTACCAGAGCGGCAGCTGGACA < 41bp 0.493334837902779 0.86773774475832 0.3216629 0.72238445 prediction 0.73547548951664 Functional Gain - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68051052 chr12:68051053 synonymous SNV . 0 22 hPsi_associated_SNPs_19513 0 0 0 0 0 Ribosome 0.444162966161377 0.439562658290973 0.4447689 0 hPsi_site_13237 iPseU_CNN:0.4447689;iRNA_PseU:0 13238 chr14 76964693 76964693 1 + G A BLCA 76964692 + 76964672 76964712 41 GCTGCTGCTGACACTGCCGCTGCTGCGGCAGACGGCCGCCA GCTGCTGCTGACACTGCCGCTACTGCGGCAGACGGCCGCCA < 41bp 0.485483975569996 0.86773115487468 0.2648824 0.29737654 prediction 0.735462309749359 Functional Gain - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76964692 chr14:76964693 synonymous SNV . 0 22 hPsi_associated_SNPs_19514 0 0 1 0 0 Nucleus 0.438825310672767 0.438596791078319 0 0 hPsi_site_13238 iPseU_CNN:0;iRNA_PseU:0 13239 chr10 94834754 94834754 1 + G A HNSC 94834753 + 94834733 94834773 41 GGACTCCGAGCAGCAGCTTGTGGAGGCCTTCGAGGAAATGA GGACTCCGAGCAGCAGCTTGTAGAGGCCTTCGAGGAAATGA < 41bp 0.517323971990615 0.885051218250666 0.2976774 0.66002214 prediction 0.735454492520101 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94834753 chr10:94834754 synonymous SNV . 0 22 hPsi_associated_SNPs_19515 0 0 0 0 1 Endoplasmic reticulum 0.438536783179399 0.438729111500643 0.32004428 0 hPsi_site_13239 iPseU_CNN:0.32004428;iRNA_PseU:0 13240 chr20 2376055 2376055 1 + G A HNSC 2376054 + 2376034 2376074 41 AACCGGAGGCTGGGCGAGTTTGTTCTCCTTTTCAACCCATG AACCGGAGGCTGGGCGAGTTTATTCTCCTTTTCAACCCATG < 41bp 0.492080167378139 0.867726883978085 0.23206243 0.29211825 prediction 0.73545376795617 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2376054 chr20:2376055 nonsynonymous SNV 0.969 1 22 hPsi_associated_SNPs_19516 0 0 0 0 1 exosome 0.438718593040942 0.438718592995043 0 0 hPsi_site_13240 iPseU_CNN:0;iRNA_PseU:0 13241 chr22 44528829 44528829 1 + G A rs556764536 44528828 + 44528808 44528848 41 CCTGCTGGTCTCTCTGGCCATGCACTTCAGGGCCCCCATCC CCTGCTGGTCTCTCTGGCCATACACTTCAGGGCCCCCATCC < 41bp 0.51548507103935 0.88320715263447 0.26924837 0.39293194 prediction 0.73544416319024 Functional Gain - PARVB ENSG00000188677 CDS Human protein_coding chr22:44528828 chr22:44528829 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19517 0 0 0 0 2 Ribosome 0.438718990661883 0.438718229023326 0 0 hPsi_site_13241 iPseU_CNN:0;iRNA_PseU:0 13242 chr5 170818351 170818351 1 + G A CESC 170818350 + 170818330 170818370 41 AAGGATGAGTTGCACATTGTTGAAGCAGAGGCAATGAATTA AAGGATGAGTTGCACATTGTTAAAGCAGAGGCAATGAATTA < 41bp 0.505103814036117 0.872822122837455 0.33978742 0.5627178 prediction 0.735436617602676 Functional Gain - NPM1 ENSG00000181163 CDS Human protein_coding chr5:170818350 chr5:170818351 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19518 0 0 1 0 2 Ribosome 0.438681954089313 0.438716211105084 0.1254356 0 hPsi_site_13242 iPseU_CNN:0.1254356;iRNA_PseU:0 13243 chr19 16611839 16611839 1 + G A UCEC 16611838 + 16611818 16611858 41 GTGGACCCAGGCTTGCCTCATGTAGACCGCCCACCACTGCC GTGGACCCAGGCTTGCCTCATATAGACCGCCCACCACTGCC < 41bp 0.506684328467701 0.874390378554788 0.54722977 0.8246096 prediction 0.735412100174174 Functional Gain - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16611838 chr19:16611839 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_19519 0 0 1 0 0 Cytosol 0.438715370582107 0.438718526338098 0.55475966 0 hPsi_site_13243 iPseU_CNN:0.55475966;iRNA_PseU:0 13244 chr6 26463572 26463572 1 + G A UCEC 26463571 + 26463551 26463591 41 GTACCCAAAGCCCCTCACAGTGTGGAGGGACCCCTACGGTG GTACCCAAAGCCCCTCACAGTATGGAGGGACCCCTACGGTG < 41bp 0.523017379447229 0.890707458947376 0.56804466 0.70183676 prediction 0.735380159000294 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26463571 chr6:26463572 synonymous SNV . 0 22 hPsi_associated_SNPs_19520 0 0 1 0 0 Endoplasmic reticulum 0.438802513393634 0.438710398245308 0.2675842 0 hPsi_site_13244 iPseU_CNN:0.2675842;iRNA_PseU:0 13245 chr1 22837769 22837769 1 + G A CESC 22837768 + 22837748 22837788 41 CAGTCCCGGCCATTGAAATATGCCACCTCCTGTGCAGTGTC CAGTCCCGGCCATTGAAATATACCACCTCCTGTGCAGTGTC < 41bp 0.491750924520815 0.867685873695929 0.3290969 0.48913902 prediction 0.735371747391858 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22837768 chr1:22837769 nonsynonymous SNV 0.836 1 22 hPsi_associated_SNPs_19521 0 0 1 0 2 Nucleus 0.438669163338786 0.439285169766867 0 0 hPsi_site_13245 iPseU_CNN:0;iRNA_PseU:0 13246 chr1 46032262 46032262 1 + G A CESC 46032261 + 46032241 46032281 41 GTAAAAGCAGCTGTTAAGTATGCCCTTAGCGTAGGCTACCG GTAAAAGCAGCTGTTAAGTATACCCTTAGCGTAGGCTACCG < 41bp 0.503650386745146 0.871329769354686 0.25157353 0.5139874 prediction 0.735358765219079 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46032261 chr1:46032262 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19522 0 0 1 0 2 Ribosome 0.438717485690742 0.438717923068721 0.0279748 0 hPsi_site_13246 iPseU_CNN:0.0279748;iRNA_PseU:0 13247 chr7 810163 810163 1 + G A STAD 810162 + 810142 810182 41 GCCCACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGC GCCCACGCTGAGGGCCTGTCTACAGCCCTCCCAAGACCCGC < 41bp 0.519996711722907 0.887654315317016 0.6584714 0.7073891 prediction 0.735315207188218 Functional Gain - DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:810162 chr7:810163 synonymous SNV . 0 22 hPsi_associated_SNPs_19523 0 0 1 0 2 Ribosome 0.438718592995367 0.438718592996823 0.0978353999999999 0 hPsi_site_13247 iPseU_CNN:0.0978353999999999;iRNA_PseU:0 13248 chr12 57919621 57919621 1 + G A COAD 57919620 + 57919600 57919640 41 TCCTGCCTCTCAGCCACCAGTGTCTTCAGCCACTATGCACC TCCTGCCTCTCAGCCACCAGTATCTTCAGCCACTATGCACC < 41bp 0.481843569770045 0.867644568006669 0.2969526 0.389014 prediction 0.735289136013338 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919620 chr12:57919621 synonymous SNV . 0 22 hPsi_associated_SNPs_19524 0 0 1 0 0 chromatin 0.43871841171367 0.43871833478725 0 0 hPsi_site_13248 iPseU_CNN:0;iRNA_PseU:0 13249 chr11 113849972 113849972 1 + G A rs147444930 113849971 + 113849951 113849991 41 CCAGGATGAGAAGAATCAGGTGCTGACCACCTACATCTGGT CCAGGATGAGAAGAATCAGGTACTGACCACCTACATCTGGT < 41bp 0.514684586417254 0.882317681612777 0.23605025 0.6452602 prediction 0.735266190391047 Functional Gain - HTR3A ENSG00000166736 CDS Human protein_coding chr11:113849971 chr11:113849972 synonymous SNV . 0 22 hPsi_associated_SNPs_19525 0 0 0 0 2 Cytosol 0.439038256013685 0.43879220740783 0.2905204 0 hPsi_site_13249 iPseU_CNN:0.2905204;iRNA_PseU:0 13250 chr9 133932496 133932496 1 + G A COAD 133932495 + 133932475 133932515 41 CCTATGCCAGCTGTGTCCCCTGCACCTGTAACCAGCATGGC CCTATGCCAGCTGTGTCCCCTACACCTGTAACCAGCATGGC < 41bp 0.483462599614435 0.867572509046724 0.35379434 0.39270332 prediction 0.735145018093448 Functional Gain - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133932495 chr9:133932496 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_19526 0 0 0 0 1 chromatin 0.438134343787937 0.438338072420031 0 0 hPsi_site_13250 iPseU_CNN:0;iRNA_PseU:0 13251 chr17 6940102 6940102 1 + G A STAD 6940101 + 6940081 6940121 41 CCCAGGCCCGTGGTGATGACTGGAGGCATCTTGGCTGCGCT CCCAGGCCCGTGGTGATGACTAGAGGCATCTTGGCTGCGCT < 41bp 0.493948881014666 0.867536628175686 0.32120323 0.45105526 prediction 0.735073256351371 Functional Gain - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6940101 chr17:6940102 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_19527 0 0 0 0 2 chromatin 0.438714682435732 0.438719972212205 0 0 hPsi_site_13251 iPseU_CNN:0;iRNA_PseU:0 13252 chr15 91491933 91491933 1 + G A GBM 91491932 + 91491912 91491952 41 TGGCCTCAGCGCTGGTGAACTGCACCAACAGCTATGACTAC TGGCCTCAGCGCTGGTGAACTACACCAACAGCTATGACTAC < 41bp 0.483294360837981 0.867519496859228 0.26375958 0.39729148 prediction 0.735038993718456 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91491932 chr15:91491933 nonsynonymous SNV 0.970 4 22 hPsi_associated_SNPs_19528 0 0 1 0 2 Nucleus 0.438611033406028 0.434683401515348 0 0 hPsi_site_13252 iPseU_CNN:0;iRNA_PseU:0 13253 chr6 35715175 35715175 1 + G A BLCA 35715174 + 35715154 35715194 41 GCGACGGGTGATGCCTGCCTTGATGGAGATCCTGCAGTCAG GCGACGGGTGATGCCTGCCTTAATGGAGATCCTGCAGTCAG < 41bp 0.485086895716494 0.867515314427206 0.2751785 0.56628567 prediction 0.735030628854413 Functional Gain - ARMC12 ENSG00000157343 CDS Human protein_coding chr6:35715174 chr6:35715175 synonymous SNV . 0 22 hPsi_associated_SNPs_19529 0 0 0 0 1 exosome 0.438718634743916 0.438718724096874 0.13257134 0 hPsi_site_13253 iPseU_CNN:0.13257134;iRNA_PseU:0 13254 chr20 30227868 30227868 1 + G A SKCM 30227867 + 30227847 30227887 41 AGGAGAAGGAGAAGGGAAGCTGGACCCAGCTGACCCACGCC AGGAGAAGGAGAAGGGAAGCTAGACCCAGCTGACCCACGCC < 41bp 0.505894990848872 0.873403405405129 0.29062426 0.6598144 prediction 0.735016829112515 Functional Gain - COX4I2 ENSG00000131055 CDS Human protein_coding chr20:30227867 chr20:30227868 stopgain 1.000 1 22 hPsi_associated_SNPs_19530 0 0 0 0 1 exosome 0.438718594202947 0.43870452238532 0.3196288 0 hPsi_site_13254 iPseU_CNN:0.3196288;iRNA_PseU:0 13255 chr7 150772823 150772823 1 + G A STAD 150772822 + 150772802 150772842 41 GCGGCTGCATCTGCTGCTCATGCCGCCCAAACACCACCCAG GCGGCTGCATCTGCTGCTCATACCGCCCAAACACCACCCAG < 41bp 0.489453448970494 0.867504240342611 0.23611692 0.595886 prediction 0.735008480685221 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772822 chr7:150772823 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_19531 0 0 1 0 1 Ribosome 0.438719407565044 0.438636912213135 0.191772 0 hPsi_site_13255 iPseU_CNN:0.191772;iRNA_PseU:0 13256 chr15 91490107 91490107 1 + G A UCEC 91490106 + 91490086 91490126 41 TGCTGAAGGACCTATATAAGTGCAGCGAGAAGGACAGCATC TGCTGAAGGACCTATATAAGTACAGCGAGAAGGACAGCATC < 41bp 0.505173144431023 0.872663614889635 0.2502507 0.40546852 prediction 0.734980940917223 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91490106 chr15:91490107 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_19532 0 0 1 0 1 Nucleus 0.438718593659336 0.438718581565307 0 0 hPsi_site_13256 iPseU_CNN:0;iRNA_PseU:0 13257 chr11 61017238 61017238 1 + G A STAD 61017237 + 61017217 61017257 41 ACCGGCCCAACCAGCCCCATTGCCAACATCCAGAGCGACAT ACCGGCCCAACCAGCCCCATTACCAACATCCAGAGCGACAT < 41bp 0.511430727083993 0.878920757113542 0.42941383 0.6755557 prediction 0.734980060059098 Functional Gain - PGA5 ENSG00000229183;ENSG00000256713 CDS Human other chr11:61017237 chr11:61017238 nonsynonymous SNV 0.387 0 22 hPsi_associated_SNPs_19533 0 0 0 0 2 exosome 0.438718370494223 0.438719380591696 0.3511114 0 hPsi_site_13257 iPseU_CNN:0.3511114;iRNA_PseU:0 13258 chr1 182787734 182787734 1 + G A OV 182787733 + 182787713 182787753 41 GATCCCCACCTTCCAAGGGCTGAAATTCAGTGATACAGATC GATCCCCACCTTCCAAGGGCTAAAATTCAGTGATACAGATC < 41bp 0.49513667637044 0.867473238451721 0.25715256 0.39587086 prediction 0.734946476903442 Functional Gain - NPL ENSG00000135838 CDS Human protein_coding chr1:182787733 chr1:182787734 synonymous SNV . 0 22 hPsi_associated_SNPs_19534 0 0 1 0 2 Cytosol 0.438718593003954 0.438718593001168 0 0 hPsi_site_13258 iPseU_CNN:0;iRNA_PseU:0 13259 chr2 74141971 74141971 1 + G A CESC 74141970 + 74141950 74141990 41 AATGAGCGCTTCCGCTGCCCTGAGACCCTCTTCCAGCCTTC AATGAGCGCTTCCGCTGCCCTAAGACCCTCTTCCAGCCTTC < 41bp 0.507840105686263 0.875307584964737 0.26238525 0.30996275 prediction 0.734934958556948 Functional Gain - ACTG2 ENSG00000163017 CDS Human protein_coding chr2:74141970 chr2:74141971 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_19535 0 0 0 0 1 Cytosol 0.438716240828376 0.438718407604069 0 0 hPsi_site_13259 iPseU_CNN:0;iRNA_PseU:0 13260 chr17 19284199 19284199 1 + G A HNSC 19284198 + 19284178 19284218 41 CTGAGTATGTGGCCACGCGCTGGTACCGTGCGCCCGAGCTC CTGAGTATGTGGCCACGCGCTAGTACCGTGCGCCCGAGCTC < 41bp 0.483025291578279 0.867436815362187 0.08415359 0.21338078 prediction 0.734873630724373 Functional Gain - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19284198 chr17:19284199 stopgain 0.991 1 22 hPsi_associated_SNPs_19536 0 0 1 0 0 exosome 0.43874272509085 0.438720845195316 0 0 hPsi_site_13260 iPseU_CNN:0;iRNA_PseU:0 13261 chr16 56642952 56642952 1 + G A LGG 56642951 + 56642931 56642971 41 GCAAATGCAAAGAGTGCAAATGCACCTCCTGCAAGAAAAGT GCAAATGCAAAGAGTGCAAATACACCTCCTGCAAGAAAAGT < 41bp 0.507896427864074 0.875307583582097 0.33227628 0.7702714 prediction 0.734822311436046 Functional Gain - MT2A ENSG00000125148 CDS Human protein_coding chr16:56642951 chr16:56642952 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_19537 0 0 1 0 2 Ribosome 0.439076783627094 0.440000773575588 0.5405428 0 hPsi_site_13261 iPseU_CNN:0.5405428;iRNA_PseU:0 13262 chr6 44219557 44219557 1 + G A OV 44219556 + 44219536 44219576 41 CTCCCAGTCTGGAGATGAGATGACATCTCTGTCAGAGTATG CTCCCAGTCTGGAGATGAGATAACATCTCTGTCAGAGTATG < 41bp 0.488998508014611 0.867392313791173 0.25463933 0.26182306 prediction 0.734784627582347 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219556 chr6:44219557 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19538 0 0 1 0 2 Nucleus 0.438719661310325 0.438718594256381 0 0 hPsi_site_13262 iPseU_CNN:0;iRNA_PseU:0 13263 chr8 22037949 22037949 1 + G A BRCA 22037948 + 22037928 22037968 41 GAATACCCCAATGGCTACTCTGCTCACATGCACTGCGTGTG GAATACCCCAATGGCTACTCTACTCACATGCACTGCGTGTG < 41bp 0.508475695565859 0.875855305849129 0.24676761 0.46723357 prediction 0.734759220566541 Functional Gain - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22037948 chr8:22037949 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_19539 0 0 0 0 2 Endoplasmic reticulum 0.438070219943611 0.416385470338826 0 0 hPsi_site_13263 iPseU_CNN:0;iRNA_PseU:0 13264 chr1 16358283 16358283 1 + G A UCEC 16358282 + 16358262 16358302 41 GGACACGCCGCTGGAGGAGGTGGTCAAGGTTGTGACCTCCA GGACACGCCGCTGGAGGAGGTAGTCAAGGTTGTGACCTCCA < 41bp 0.482669133297062 0.867366052706137 0.23230177 0.44755542 prediction 0.734732105412273 Functional Gain - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16358282 chr1:16358283 synonymous SNV . 0 22 hPsi_associated_SNPs_19540 0 0 0 0 3 Endoplasmic reticulum 0.438718650261439 0.43871873182125 0 0 hPsi_site_13264 iPseU_CNN:0;iRNA_PseU:0 13265 chr3 126726701 126726701 1 + G A UCEC 126726700 + 126726680 126726720 41 GGTGCAAATACCGCCACGTGTGCACACACAACGTGGCTGAC GGTGCAAATACCGCCACGTGTACACACACAACGTGGCTGAC < 41bp 0.494215640592919 0.867364139867314 0.22769314 0.6810136 prediction 0.734728279734628 Functional Gain - PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126726700 chr3:126726701 nonsynonymous SNV 0.376 5 22 hPsi_associated_SNPs_19541 0 0 1 0 2 Ribosome 0.438278789184916 0.437774552304204 0.3620272 0 hPsi_site_13265 iPseU_CNN:0.3620272;iRNA_PseU:0 13266 chrX 70830605 70830605 1 + G A COAD 70830604 + 70830584 70830624 41 CTTATGCAGCACTGGTGAGATGTGGTACCCAAAGTGGCGGC CTTATGCAGCACTGGTGAGATATGGTACCCAAAGTGGCGGC < 41bp 0.506218314622289 0.873575658475887 0.2829107 0.32420975 prediction 0.734714687707195 Functional Gain - GCNA ENSG00000147174 CDS Human protein_coding chrX:70830604 chrX:70830605 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19542 0 0 0 0 2 unknown 0.441364579318357 0.441657582844687 0 0 hPsi_site_13266 iPseU_CNN:0;iRNA_PseU:0 13267 chr12 49690271 49690271 1 + G A BLCA 49690270 + 49690250 49690290 41 AGAGCGCAAGATTGAGTCTCTGATGGATGAGATTGAGTTCC AGAGCGCAAGATTGAGTCTCTAATGGATGAGATTGAGTTCC < 41bp 0.492183795643063 0.867356692260686 0.3171331 0.702219 prediction 0.734713384521372 Functional Gain - PRPH ENSG00000135406 CDS Human protein_coding chr12:49690270 chr12:49690271 synonymous SNV . 0 22 hPsi_associated_SNPs_19543 0 0 0 0 2 exosome 0.438731573985932 0.4387172752277 0.404438 0 hPsi_site_13267 iPseU_CNN:0.404438;iRNA_PseU:0 13268 chr7 148895532 148895532 1 + G A STAD 148895531 + 148895511 148895551 41 CATGATGCGAGAGCCCCAGTTGCCCACAGCAGAGATCTCAC CATGATGCGAGAGCCCCAGTTACCCACAGCAGAGATCTCAC < 41bp 0.515802374202924 0.883152992127532 0.21295747 0.5413817 prediction 0.734701235849217 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148895531 chr7:148895532 synonymous SNV . 0 22 hPsi_associated_SNPs_19544 0 0 1 0 0 Cytosol 0.428625211187027 0.453858553517607 0.0827633999999999 0 hPsi_site_13268 iPseU_CNN:0.0827633999999999;iRNA_PseU:0 13269 chr16 626161 626161 1 + G A rs373615860 626160 + 626140 626180 41 CAACACGGTGGCCTCTGTGCTGCTGGACGTGGCCCTGGGCC CAACACGGTGGCCTCTGTGCTACTGGACGTGGCCCTGGGCC < 41bp 0.511412151996949 0.878754059830978 0.57034767 0.83545685 prediction 0.734683815668059 Functional Gain - PIGQ ENSG00000007541 CDS Human protein_coding chr16:626160 chr16:626161 synonymous SNV . 0 22 hPsi_associated_SNPs_19545 0 0 1 0 2 Ribosome 0.442533126630874 0.421663081086138 0.53021836 0 hPsi_site_13269 iPseU_CNN:0.53021836;iRNA_PseU:0 13270 chr6 43182914 43182914 1 + G A UCEC 43182913 + 43182893 43182933 41 CCAGTACAGATGTCCTCTCTTGCATCCTGCACCTCTTAGGC CCAGTACAGATGTCCTCTCTTACATCCTGCACCTCTTAGGC < 41bp 0.480964614120889 0.867335689469442 0.29066455 0.567245 prediction 0.734671378938884 Functional Gain - CUL9 ENSG00000112659 CDS Human protein_coding chr6:43182913 chr6:43182914 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_19546 0 0 0 0 1 chromatin 0.438734247643925 0.438718626159649 0.13449 0 hPsi_site_13270 iPseU_CNN:0.13449;iRNA_PseU:0 13271 chr2 27305067 27305067 1 + G A rs181970467 27305066 + 27305046 27305086 41 AGCGGGCGCCTGGCAGAGGATGTGCAGAGGGCTGTGGAGAC AGCGGGCGCCTGGCAGAGGATATGCAGAGGGCTGTGGAGAC < 41bp 0.505415679164507 0.872750048791843 0.36611706 0.6585091 prediction 0.734668739254672 Functional Gain - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27305066 chr2:27305067 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19547 0 0 0 0 0 Cytosol 0.438718074484095 0.43871784849922 0.3170182 0 hPsi_site_13271 iPseU_CNN:0.3170182;iRNA_PseU:0 13272 chr3 49050495 49050495 1 + G A UCEC 49050494 + 49050474 49050514 41 GGTGACTTCCTGGTGTGTGGTGACCGCCGGGGCTCTGTGCT GGTGACTTCCTGGTGTGTGGTAACCGCCGGGGCTCTGTGCT < 41bp 0.513601468890753 0.88092956657111 0.20208281 0.6782697 prediction 0.734656195360714 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050494 chr3:49050495 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19548 0 0 1 0 2 Nucleus 0.438713210694172 0.439924987546369 0.3565394 0 hPsi_site_13272 iPseU_CNN:0.3565394;iRNA_PseU:0 13273 chr4 84502944 84502944 1 + G A rs35757547 84502943 + 84502923 84502963 41 GCGGCTCACTATGGTGTGGGTGCTGGGCGTCATAGTGCGCT GCGGCTCACTATGGTGTGGGTACTGGGCGTCATAGTGCGCT < 41bp 0.485127076194385 0.867327504965404 0.24031258 0.83128273 prediction 0.734655009930809 Functional Gain - GPAT3 ENSG00000138678 CDS Human protein_coding chr4:84502943 chr4:84502944 synonymous SNV . 0 22 hPsi_associated_SNPs_19549 0 0 0 0 1 chromatin 0.438772129010291 0.439110099696403 0.66256546 0 hPsi_site_13273 iPseU_CNN:0.66256546;iRNA_PseU:0 13274 chr12 57389215 57389215 1 + G A SKCM 57389214 + 57389194 57389234 41 GCTGGTGGAGAACCTCCTGGTGATATGCGTCAACTGGCGCG GCTGGTGGAGAACCTCCTGGTAATATGCGTCAACTGGCGCG < 41bp 0.487001493441753 0.867322812918781 0.4548596 0.82611114 prediction 0.734645625837562 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389214 chr12:57389215 synonymous SNV . 0 22 hPsi_associated_SNPs_19550 0 0 0 0 0 nucleus 0.438718592994339 0.438718592996875 0.65222228 0 hPsi_site_13274 iPseU_CNN:0.65222228;iRNA_PseU:0 13275 chr11 64120877 64120877 1 + G A SKCM 64120876 + 64120856 64120896 41 GAGAACCGGCAGCTGCTGGCTGAAGTTCAGGCCCTGAGCCG GAGAACCGGCAGCTGCTGGCTAAAGTTCAGGCCCTGAGCCG < 41bp 0.482819308531253 0.86732082803464 0.23400891 0.5790684 prediction 0.734641656069279 Functional Gain - CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64120876 chr11:64120877 nonsynonymous SNV 0.854 1 22 hPsi_associated_SNPs_19551 0 0 0 0 1 Ribosome 0.438718828491486 0.438718589101564 0.1581368 0 hPsi_site_13275 iPseU_CNN:0.1581368;iRNA_PseU:0 13276 chr7 44734059 44734059 1 + G A BRCA 44734058 + 44734038 44734078 41 AACGGCCACAACGAGATGGATGAGCCCATGTTCACGCAGCC AACGGCCACAACGAGATGGATAAGCCCATGTTCACGCAGCC < 41bp 0.481197027884266 0.867317542691218 0.7262453 0.9321884 prediction 0.734635085382435 Functional Gain - OGDH ENSG00000105953 CDS Human protein_coding chr7:44734058 chr7:44734059 nonsynonymous SNV 0.988 5 22 hPsi_associated_SNPs_19552 0 0 0 0 1 Nucleus 0.435403384635429 0.438729909823294 0.4118862 0 hPsi_site_13276 iPseU_CNN:0.4118862;iRNA_PseU:0 13277 chr19 39963085 39963085 1 + G A UCEC 39963084 + 39963064 39963104 41 AACTTCACCGTGGGTGGCTTTGCGCCTATGAGTCCCCGGAT AACTTCACCGTGGGTGGCTTTACGCCTATGAGTCCCCGGAT < 41bp 0.477212367435446 0.867316143812136 0.33222437 0.6060708 prediction 0.734632287624273 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963084 chr19:39963085 nonsynonymous SNV 0.719 0 22 hPsi_associated_SNPs_19553 0 0 1 0 2 Nucleus 0.438718269687218 0.438719048558073 0.2121416 0 hPsi_site_13277 iPseU_CNN:0.2121416;iRNA_PseU:0 13278 chr12 56515420 56515420 1 + G A BLCA 56515419 + 56515399 56515439 41 ACCACCCCCACCCCCACACTTGACCCCAGAGATCACGCCAC ACCACCCCCACCCCCACACTTAACCCCAGAGATCACGCCAC < 41bp 0.487999051568963 0.867300200752488 0.1800023 0.26840398 prediction 0.734600401504976 Functional Gain - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515419 chr12:56515420 synonymous SNV . 0 22 hPsi_associated_SNPs_19554 0 0 0 0 0 Ribosome 0.438719838341162 0.438718593541466 0 0 hPsi_site_13278 iPseU_CNN:0;iRNA_PseU:0 13279 chr3 39374656 39374656 1 + G A BLCA 39374655 + 39374635 39374675 41 ATGTAGCATAAGCCAACAGCTGACTTATGCCACCCATGTCA ATGTAGCATAAGCCAACAGCTAACTTATGCCACCCATGTCA < 41bp 0.498977009396014 0.867291454471403 0.28499284 0.45064265 prediction 0.734582908942805 Functional Gain - CCR8 ENSG00000179934 CDS Human protein_coding chr3:39374655 chr3:39374656 synonymous SNV . 0 22 hPsi_associated_SNPs_19555 0 0 0 0 0 exosome 0.438713505081132 0.438718594370705 0 0 hPsi_site_13279 iPseU_CNN:0;iRNA_PseU:0 13280 chr18 8831615 8831615 1 + G A rs11665124 8831614 + 8831594 8831634 41 CGGCTCTGAAGGAACTACCTTGTTCTGCACTAGCTCCATCC CGGCTCTGAAGGAACTACCTTATTCTGCACTAGCTCCATCC < 41bp 0.505087140595246 0.872359998249557 0.30282265 0.3611657 prediction 0.734545715308623 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8831614 chr18:8831615 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19556 0 0 1 0 1 Nucleus 0.438719223479833 0.438722670773569 0 0 hPsi_site_13280 iPseU_CNN:0;iRNA_PseU:0 13281 chr16 31391655 31391655 1 + G A BLCA 31391654 + 31391634 31391674 41 CTTCAGCGTCCAGGAGGAGCTGGATTTCACCCTGAAGGGCA CTTCAGCGTCCAGGAGGAGCTAGATTTCACCCTGAAGGGCA < 41bp 0.480973571583845 0.867267588509242 0.21134445 0.29007444 prediction 0.734535177018485 Functional Gain - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31391654 chr16:31391655 synonymous SNV . 0 22 hPsi_associated_SNPs_19557 0 0 0 0 2 Nucleus 0.438718592995101 0.438718592995149 0 0 hPsi_site_13281 iPseU_CNN:0;iRNA_PseU:0 13282 chr2 218999975 218999975 1 + G A LUAD 218999974 + 218999954 218999994 41 CGTTACCTGGCCATTGTCCATGCCACACGCACACTGACCCA CGTTACCTGGCCATTGTCCATACCACACGCACACTGACCCA < 41bp 0.486208393531134 0.867263109970645 0.4089657 0.8885945 prediction 0.734526219941291 Functional Gain - CXCR2 ENSG00000180871 CDS Human protein_coding chr2:218999974 chr2:218999975 nonsynonymous SNV 0.910 4 22 hPsi_associated_SNPs_19558 0 0 0 0 0 exosome 0.438784305356434 0.439059609793383 0.777189 0 hPsi_site_13282 iPseU_CNN:0.777189;iRNA_PseU:0 13283 chr9 131469665 131469665 1 + G A BLCA 131469664 + 131469644 131469684 41 CCAGCCTTCAGGGACACCTGTGAAGCCCACCGCCCTAACAG CCAGCCTTCAGGGACACCTGTAAAGCCCACCGCCCTAACAG < 41bp 0.483326962818656 0.867229232169672 0.6863211 0.8639082 prediction 0.734458464339344 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131469664 chr9:131469665 synonymous SNV . 0 22 hPsi_associated_SNPs_19559 0 0 1 0 1 chromatin 0.438718592994077 0.438718592995101 0.3551742 0 hPsi_site_13283 iPseU_CNN:0.3551742;iRNA_PseU:0 13284 chr8 48882407 48882407 1 + G A BRCA 48882406 + 48882386 48882426 41 CAATCCAAGAGTGAGTAATGTGAAGTCTGTCTACAAAACCC CAATCCAAGAGTGAGTAATGTAAAGTCTGTCTACAAAACCC < 41bp 0.511833044171283 0.87905845692328 0.3230813 0.74559784 prediction 0.734450825503995 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48882406 chr8:48882407 synonymous SNV . 0 22 hPsi_associated_SNPs_19560 0 0 1 0 1 Cytosol 0.442984652291868 0.438757853337682 0.49119568 0 hPsi_site_13284 iPseU_CNN:0.49119568;iRNA_PseU:0 13285 chr3 45988186 45988186 1 + G A SKCM 45988185 + 45988165 45988205 41 CCTGACGGATGTGTTCCTGGTGAACCTACCCCTGGCTGACC CCTGACGGATGTGTTCCTGGTAAACCTACCCCTGGCTGACC < 41bp 0.512466392309519 0.879671385078636 0.23191029 0.8842191 prediction 0.734409985538233 Functional Gain - CXCR6 ENSG00000172215 CDS Human protein_coding chr3:45988185 chr3:45988186 synonymous SNV . 0 22 hPsi_associated_SNPs_19561 0 0 0 0 0 exosome 0.438631077977356 0.438718595362028 0.7684382 0 hPsi_site_13285 iPseU_CNN:0.7684382;iRNA_PseU:0 13286 chr1 211545648 211545648 1 + G A rs147675295 211545647 + 211545627 211545667 41 GGCGGTGGATGGGCACACAGTGTCCATCTTCAGCCAGTCCT GGCGGTGGATGGGCACACAGTATCCATCTTCAGCCAGTCCT < 41bp 0.502022795948484 0.869227033923912 0.36049485 0.70339864 prediction 0.734408475950856 Functional Gain - TRAF5 ENSG00000082512 CDS Human protein_coding chr1:211545647 chr1:211545648 synonymous SNV . 0 22 hPsi_associated_SNPs_19562 0 0 0 0 0 Nucleus 0.438720147042813 0.438719224680683 0.40679728 0 hPsi_site_13286 iPseU_CNN:0.40679728;iRNA_PseU:0 13287 chr19 48244215 48244215 1 + G A BLCA 48244214 + 48244194 48244234 41 AGAGGCACTGGACGAGATGCTGACGCACGACATCGCCAAGC AGAGGCACTGGACGAGATGCTAACGCACGACATCGCCAAGC < 41bp 0.49258731235702 0.867188954616352 0.2509827 0.61054736 prediction 0.734377909232705 Functional Gain - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48244214 chr19:48244215 synonymous SNV . 0 22 hPsi_associated_SNPs_19563 0 0 0 0 1 Nucleus 0.435754870103881 0.438590790247873 0.22109472 0 hPsi_site_13287 iPseU_CNN:0.22109472;iRNA_PseU:0 13288 chr16 56857669 56857669 1 + G A BLCA 56857668 + 56857648 56857688 41 ACAAATGACAGACGTGTTGTTGACACCGGCAACGGATGCCC ACAAATGACAGACGTGTTGTTAACACCGGCAACGGATGCCC < 41bp 0.479528662572162 0.867185953733314 0.3526832 0.68573326 prediction 0.734371907466628 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56857668 chr16:56857669 synonymous SNV . 0 22 hPsi_associated_SNPs_19564 0 0 1 0 2 Nucleus 0.438728967904336 0.438930336409642 0.37146652 0 hPsi_site_13288 iPseU_CNN:0.37146652;iRNA_PseU:0 13289 chr9 139641950 139641950 1 + G A UCEC 139641949 + 139641929 139641969 41 CACCCCCACGACGTTCTTCATGTCCTTCTCCATGGCAAAGC CACCCCCACGACGTTCTTCATATCCTTCTCCATGGCAAAGC < 41bp 0.499387619950214 0.86717528718639 0.24615577 0.48888147 prediction 0.73435057437278 Functional Gain - LCN6 ENSG00000204003;ENSG00000267206 CDS Human other chr9:139641949 chr9:139641950 synonymous SNV . 0 22 hPsi_associated_SNPs_19565 0 0 0 0 0 exosome 0.43871858433571 0.438718592369616 0 0 hPsi_site_13289 iPseU_CNN:0;iRNA_PseU:0 13290 chr1 205211133 205211133 1 + G A rs144312565 205211132 + 205211112 205211152 41 GCTGGCCGACGGCAGCAACGTGTACCTCCTGGCTGAGGAGG GCTGGCCGACGGCAGCAACGTATACCTCCTGGCTGAGGAGG < 41bp 0.484849185163835 0.867154722432754 0.32868293 0.6233363 prediction 0.734309444865507 Functional Gain - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205211132 chr1:205211133 synonymous SNV . 0 22 hPsi_associated_SNPs_19566 0 0 0 0 1 chromatin 0.438718816281345 0.438718643987526 0.2466726 0 hPsi_site_13290 iPseU_CNN:0.2466726;iRNA_PseU:0 13291 chr16 2131669 2131669 1 + G A STAD 2131668 + 2131648 2131688 41 GGACATCAACAACATGCCCCTGCAGGAGCTGTCTAACGCCC GGACATCAACAACATGCCCCTACAGGAGCTGTCTAACGCCC < 41bp 0.504163240251407 0.871311709147754 0.29652095 0.3480791 prediction 0.734296937792693 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2131668 chr16:2131669 synonymous SNV . 0 22 hPsi_associated_SNPs_19567 0 0 1 0 1 Endoplasmic reticulum 0.449570953534779 0.43875964195179 0 0 hPsi_site_13291 iPseU_CNN:0;iRNA_PseU:0 13292 chr20 43566728 43566728 1 + G A HNSC 43566727 + 43566707 43566747 41 CGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTGGC CGTCTCTACCCCCTTATCCATAATGTCCACACCCAGCTGGC < 41bp 0.479784499328667 0.867146805016858 0.20906779 0.32351553 prediction 0.734293610033715 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566727 chr20:43566728 nonsynonymous SNV 0.078 0 22 hPsi_associated_SNPs_19568 0 0 1 1 2 chromatin 0.438708679259293 0.438710725064732 0 0 hPsi_site_13292 iPseU_CNN:0;iRNA_PseU:0 13293 chr3 33887008 33887008 1 + G A rs112754416 33887007 + 33886987 33887027 41 TCGTGACACCATCGTGCTTTTGTGTAAGCCAGAGCCTGAGC TCGTGACACCATCGTGCTTTTATGTAAGCCAGAGCCTGAGC < 41bp 0.502641392085218 0.869784987461849 0.22370073 0.43016845 prediction 0.734287190753262 Functional Gain - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33887007 chr3:33887008 synonymous SNV . 0 22 hPsi_associated_SNPs_19569 0 0 1 0 2 Nucleus 0.437001150635897 0.436771991088898 0 0 hPsi_site_13293 iPseU_CNN:0;iRNA_PseU:0 13294 chr19 55670914 55670914 1 + C T UCEC 55670915 - 55670895 55670935 41 GCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTGAGT GCACCCGGAGGGAACTTGATTATGGAATTAGCCCGGTGAGT < 41bp 0.513480996202403 0.880619629182867 0.3743963 0.5978955 prediction 0.734277265960929 Functional Gain - DNAAF3 ENSG00000167646;ENSG00000267110 CDS Human other chr19:55670915 chr19:55670914 nonsynonymous SNV 0.513 2 22 hPsi_associated_SNPs_19570 0 0 0 0 2 nucleolus 0.438718558073439 0.438718592039046 0.195791 0 hPsi_site_13294 iPseU_CNN:0.195791;iRNA_PseU:0 13295 chr11 865968 865968 1 + G A STAD 865967 + 865947 865987 41 TCAGGAGAACCTGCTGGCTGTGGGCATCTTTGGGCTGTGCA TCAGGAGAACCTGCTGGCTGTAGGCATCTTTGGGCTGTGCA < 41bp 0.490890789599856 0.867134792352871 0.2737189 0.6415205 prediction 0.734269584705741 Functional Gain - TSPAN4 ENSG00000214063 CDS Human protein_coding chr11:865967 chr11:865968 synonymous SNV . 0 22 hPsi_associated_SNPs_19571 0 0 1 0 2 Ribosome 0.439773321127785 0.43875967224254 0.283041 0 hPsi_site_13295 iPseU_CNN:0.283041;iRNA_PseU:0 13296 chr16 70190531 70190531 1 + G A UCEC 70190530 + 70190510 70190550 41 TACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC TACCGGAATGGGCAGTATGTTAGCAAGACCACCAGCAGTGC < 41bp 0.502324144308352 0.869454991429458 0.29520747 0.43709293 prediction 0.734261694242213 Functional Gain - PDPR ENSG00000090857 CDS Human protein_coding chr16:70190530 chr16:70190531 nonsynonymous SNV 0.631 5 22 hPsi_associated_SNPs_19572 0 0 1 0 0 Nucleus 0.43867292144657 0.438738519124426 0 0 hPsi_site_13296 iPseU_CNN:0;iRNA_PseU:0 13297 chr13 113803279 113803279 1 + G A SKCM 113803278 + 113803258 113803298 41 CGGTGAGGCGGTGCACGAGGTGGAGGTGGTCATCAAGCACA CGGTGAGGCGGTGCACGAGGTAGAGGTGGTCATCAAGCACA < 41bp 0.50660951035534 0.873730189405819 0.25590175 0.7232421 prediction 0.734241358100958 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113803278 chr13:113803279 stopgain 0.321 0 22 hPsi_associated_SNPs_19573 0 0 1 0 1 nucleus 0.438706520616961 0.43871762648721 0.4464842 0 hPsi_site_13297 iPseU_CNN:0.4464842;iRNA_PseU:0 13298 chr15 75189417 75189417 1 + G A UCEC 75189416 + 75189396 75189436 41 GGCCTGACACCCAAGTTCATTGATGTGCCAACCCTGTGTGA GGCCTGACACCCAAGTTCATTAATGTGCCAACCCTGTGTGA < 41bp 0.509265535433285 0.876378649519625 0.26168275 0.69632494 prediction 0.734226228172681 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75189416 chr15:75189417 nonsynonymous SNV 0.975 5 22 hPsi_associated_SNPs_19574 0 0 1 0 1 Ribosome 0.438718601860878 0.438718592154497 0.39264988 0 hPsi_site_13298 iPseU_CNN:0.39264988;iRNA_PseU:0 13299 chr3 155611429 155611429 1 + G A UCEC 155611428 + 155611408 155611448 41 AAGAGTGAGGGAACTGTTCGTGCAGTCTGAAATTTTCCCCT AAGAGTGAGGGAACTGTTCGTACAGTCTGAAATTTTCCCCT < 41bp 0.498967287413509 0.867107766159333 0.5725588 0.83110285 prediction 0.734215532318667 Functional Gain - GMPS ENSG00000163655 CDS Human protein_coding chr3:155611428 chr3:155611429 synonymous SNV . 0 22 hPsi_associated_SNPs_19575 0 0 1 0 1 Nucleus 0.438718582263257 0.438718592973287 0.5170881 0 hPsi_site_13299 iPseU_CNN:0.5170881;iRNA_PseU:0 13300 chr12 129431940 129431940 1 + G A SKCM 129431939 + 129431919 129431959 41 AGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGG AGAAGATCTGCACGCGGTGGTAAAGAATTGCTTCGCGGTGG < 41bp 0.482122258919842 0.86707661885266 0.3520897 0.5893004 prediction 0.73415323770532 Functional Gain - GLT1D1 ENSG00000151948 CDS Human protein_coding chr12:129431939 chr12:129431940 synonymous SNV . 0 22 hPsi_associated_SNPs_19576 0 0 0 1 2 Cytosol 0.438719819276547 0.438694029243144 0.1786008 0 hPsi_site_13300 iPseU_CNN:0.1786008;iRNA_PseU:0 13301 chr12 57389721 57389721 1 + G A STAD 57389720 + 57389700 57389740 41 TCTTCAATGTGCTGACAGCCTGCCGGCTGCGGCAGCCAGGA TCTTCAATGTGCTGACAGCCTACCGGCTGCGGCAGCCAGGA < 41bp 0.505968100720802 0.873010231370554 0.2433267 0.27917504 prediction 0.734084261299503 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389720 chr12:57389721 nonsynonymous SNV 0.321 0 22 hPsi_associated_SNPs_19577 0 0 0 0 0 nucleus 0.438744893404902 0.439310139106039 0 0 hPsi_site_13301 iPseU_CNN:0;iRNA_PseU:0 13302 chr19 52272652 52272652 1 + G A UCEC 52272651 + 52272631 52272671 41 ACGGGTCCTCACTGCTGTGGTGGCTTCTTTCTTCATCTGTT ACGGGTCCTCACTGCTGTGGTAGCTTCTTTCTTCATCTGTT < 41bp 0.489497154044538 0.866987462037308 0.30420882 0.36759955 prediction 0.733974924074616 Functional Gain - FPR2 ENSG00000171049 CDS Human protein_coding chr19:52272651 chr19:52272652 synonymous SNV . 0 22 hPsi_associated_SNPs_19578 0 0 0 0 0 exosome 0.438646839260956 0.438718531948311 0 0 hPsi_site_13302 iPseU_CNN:0;iRNA_PseU:0 13303 chr10 46250521 46250521 1 + G A HNSC 46250520 + 46250500 46250540 41 GATGATGATGGTGATGATGATGACGACTTTTTCTCGGCACC GATGATGATGGTGATGATGATAACGACTTTTTCTCGGCACC < 41bp 0.492494257021453 0.866947084409289 0.25746363 0.30554372 prediction 0.733894168818578 Functional Gain - WASHC2C ENSG00000172661 CDS Human protein_coding chr10:46250520 chr10:46250521 nonsynonymous SNV 0.197 3 22 hPsi_associated_SNPs_19579 0 0 0 0 1 unknown 0.445074272066352 0.439601914169509 0 0 hPsi_site_13303 iPseU_CNN:0;iRNA_PseU:0 13304 chr1 29642538 29642538 1 + G A UCEC 29642537 + 29642517 29642557 41 CAGTACATCTTCATTCATGATGCAATCCTGGAGGCCTGCCT CAGTACATCTTCATTCATGATACAATCCTGGAGGCCTGCCT < 41bp 0.499253455287631 0.866942845899205 0.27846497 0.64740944 prediction 0.73388569179841 Functional Gain - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29642537 chr1:29642538 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19580 0 0 0 0 1 Endoplasmic reticulum 0.438717984304803 0.438718536904613 0.29481888 0 hPsi_site_13304 iPseU_CNN:0.29481888;iRNA_PseU:0 13305 chr19 47259313 47259313 1 + G A rs140084192 47259312 + 47259292 47259332 41 CGGAGATGCTGTGGTGCTCCTGCGCGCCCGCGACCTCTTCA CGGAGATGCTGTGGTGCTCCTACGCGCCCGCGACCTCTTCA < 41bp 0.50078420681417 0.86768676603803 0.24524534 0.76477516 prediction 0.733805118447719 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259312 chr19:47259313 synonymous SNV . 0 22 hPsi_associated_SNPs_19581 2 0 1 0 0 Nucleus 0.438718146972471 0.438717172615563 0.52955032 0 hPsi_site_13305 iPseU_CNN:0.52955032;iRNA_PseU:0 13306 chr3 5241340 5241340 1 + G A STAD 5241339 + 5241319 5241359 41 GTGATCAACACAGTTTCATTTGACAAAGATTCCACCGTCCA GTGATCAACACAGTTTCATTTAACAAAGATTCCACCGTCCA < 41bp 0.506008644209877 0.872909031302077 0.51208705 0.75021815 prediction 0.7338007741844 Functional Gain - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5241339 chr3:5241340 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19582 0 0 1 0 2 Ribosome 0.43834117492559 0.439093225585602 0.4762622 0 hPsi_site_13306 iPseU_CNN:0.4762622;iRNA_PseU:0 13307 chr10 43882582 43882582 1 + C T STAD 43882583 - 43882563 43882603 41 GAGGAGTACAGTGGCCTCAGTGATGGCTACGGCTTCACCAC GAGGAGTACAGTGGCCTCAGTAATGGCTACGGCTTCACCAC < 41bp 0.480257152277116 0.866875826249767 0.2613452 0.36223358 prediction 0.733751652499534 Functional Gain - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882583 chr10:43882582 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_19583 0 0 1 0 0 Cytosol 0.43873570396042 0.438718590787916 0 0 hPsi_site_13307 iPseU_CNN:0;iRNA_PseU:0 13308 chr15 43441247 43441247 1 + G A COAD 43441246 + 43441226 43441266 41 GTTCGGCTATAGCTTATTTGTGTGGACATCTCCATACACTT GTTCGGCTATAGCTTATTTGTATGGACATCTCCATACACTT < 41bp 0.504254030976469 0.871129761123954 0.30817944 0.34425426 prediction 0.73375146029497 Functional Gain - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43441246 chr15:43441247 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19584 0 0 1 0 1 chromatin 0.438718589239663 0.438718591764932 0 0 hPsi_site_13308 iPseU_CNN:0;iRNA_PseU:0 13309 chr22 40066871 40066871 1 + G A rs533339778 40066870 + 40066850 40066890 41 GGCTGCTCATCCACTCCATGTGCACCAGCCACTACCTGGAC GGCTGCTCATCCACTCCATGTACACCAGCCACTACCTGGAC < 41bp 0.489554128034065 0.866870693214537 0.19096568 0.6455491 prediction 0.733741386429074 Functional Gain - CACNA1I ENSG00000100346 CDS Human protein_coding chr22:40066870 chr22:40066871 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_19585 0 0 0 0 2 Endoplasmic reticulum 0.438918988235111 0.439254757115235 0.2910982 0 hPsi_site_13309 iPseU_CNN:0.2910982;iRNA_PseU:0 13310 chr7 149575803 149575803 1 + G A LUSC 149575802 + 149575782 149575822 41 CCTGGCGCAGCTGAACCCCCTGTTCGGGCCCCAGCTGAAGA CCTGGCGCAGCTGAACCCCCTATTCGGGCCCCAGCTGAAGA < 41bp 0.495644870967973 0.866869533719956 0.3823232 0.59410137 prediction 0.733739067439912 Functional Gain - ATP6V0E2 ENSG00000171130 CDS Human protein_coding chr7:149575802 chr7:149575803 synonymous SNV . 0 22 hPsi_associated_SNPs_19586 0 0 1 0 3 Ribosome 0.438756623789267 0.438718435603825 0.18820274 0 hPsi_site_13310 iPseU_CNN:0.18820274;iRNA_PseU:0 13311 chr19 51647784 51647784 1 + G A SKCM 51647783 + 51647763 51647803 41 GCCCCCTATGATCTCCTGGATGGGGACCTCTGTGTCCCCCC GCCCCCTATGATCTCCTGGATAGGGACCTCTGTGTCCCCCC < 41bp 0.491627313843708 0.866866930004854 0.40158445 0.7189972 prediction 0.733733860009707 Functional Gain - SIGLEC7 ENSG00000168995 CDS Human protein_coding chr19:51647783 chr19:51647784 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_19587 0 0 0 0 0 exosome 0.438714619169046 0.4387185903045 0.4379944 0 hPsi_site_13311 iPseU_CNN:0.4379944;iRNA_PseU:0 13312 chr8 22262261 22262261 1 + G A rs548164733 22262260 + 22262240 22262280 41 TGCACCCGGCCTTCCAGAGCTGCCTCCTGCTGACCCTGCTT TGCACCCGGCCTTCCAGAGCTACCTCCTGCTGACCCTGCTT < 41bp 0.485550887597266 0.866848639689909 0.25792515 0.46138737 prediction 0.733697279379818 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22262260 chr8:22262261 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_19588 0 0 1 0 1 Endoplasmic reticulum 0.438718596016804 0.438718607667359 0 0 hPsi_site_13312 iPseU_CNN:0;iRNA_PseU:0 13313 chr21 45537786 45537786 1 + G A rs145959543 45537785 + 45537765 45537805 41 CACCTCTTGGTCACTGGCTTTGCTTCTGGAATCTTCCATCT CACCTCTTGGTCACTGGCTTTACTTCTGGAATCTTCCATCT < 41bp 0.480259547585904 0.866846971156733 0.27928352 0.65349114 prediction 0.733693942313466 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45537785 chr21:45537786 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_19589 0 0 1 0 2 Nucleus 0.438718592930387 0.438718592992727 0.30698228 0 hPsi_site_13313 iPseU_CNN:0.30698228;iRNA_PseU:0 13314 chr22 45914594 45914594 1 + G A STAD 45914593 + 45914573 45914613 41 GTCCTCCTGGAGGCCTGCTGTGCGGACGGACACCGGATGGC GTCCTCCTGGAGGCCTGCTGTACGGACGGACACCGGATGGC < 41bp 0.463611309531994 0.866846026978313 0.32729346 0.34481797 prediction 0.733692053956627 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45914593 chr22:45914594 nonsynonymous SNV 0.299 0 22 hPsi_associated_SNPs_19590 0 0 1 0 2 cytosol 0.43872106246016 0.438719642598242 0 0 hPsi_site_13314 iPseU_CNN:0;iRNA_PseU:0 13315 chr3 183504042 183504042 1 + G A LUAD 183504041 + 183504021 183504061 41 GCAGGAGGGGTTATCACAACTGCCACTTCCCCTGCCGTGGC GCAGGAGGGGTTATCACAACTACCACTTCCCCTGCCGTGGC < 41bp 0.481534568280794 0.866839997294281 0.26969555 0.38422307 prediction 0.733679994588562 Functional Gain - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183504041 chr3:183504042 nonsynonymous SNV 0.950 4 22 hPsi_associated_SNPs_19591 0 0 1 0 1 Nucleus 0.438718575532026 0.438728556417104 0 0 hPsi_site_13315 iPseU_CNN:0;iRNA_PseU:0 13316 chr21 40834402 40834402 1 + G A BLCA 40834401 + 40834381 40834421 41 TGAAGACAACAGGAGGTGGATGAGAGAGAATGTTCCTGGAG TGAAGACAACAGGAGGTGGATAAGAGAGAATGTTCCTGGAG < 41bp 0.504422802463613 0.871251265754228 0.28730416 0.6291449 prediction 0.73365692658123 Functional Gain - SH3BGR;WRB-SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40834401 chr21:40834402 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19592 0 0 1 0 1 unknown 0.438705322571099 0.438715194943867 0.2582898 0 hPsi_site_13316 iPseU_CNN:0.2582898;iRNA_PseU:0 13317 chr17 7809236 7809236 1 + G A STAD 7809235 + 7809215 7809255 41 TGCTGTGATGCGCTGGGGGATGCCACCACAGGATGCCTTCA TGCTGTGATGCGCTGGGGGATACCACCACAGGATGCCTTCA < 41bp 0.485820912648624 0.866826948564366 0.23972294 0.3535176 prediction 0.733653897128732 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7809235 chr17:7809236 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_19593 0 0 1 0 2 Cytosol 0.438727888677814 0.43871336271641 0 0 hPsi_site_13317 iPseU_CNN:0;iRNA_PseU:0 13318 chr17 62080230 62080230 1 + C T BLCA 62080231 - 62080211 62080251 41 CACGGTGGTGTCGGTGTTGCTGTCCCTGTTCGTGACATCTG CACGGTGGTGTCGGTGTTGCTATCCCTGTTCGTGACATCTG < 41bp 0.501408993026118 0.868204438108697 0.15488026 0.41159862 prediction 0.733590890165158 Functional Gain - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62080231 chr17:62080230 synonymous SNV . 0 22 hPsi_associated_SNPs_19594 0 0 1 0 1 Endoplasmic reticulum 0.444263019240363 0.436709595229774 0 0 hPsi_site_13318 iPseU_CNN:0;iRNA_PseU:0 13319 chr16 532617 532617 1 + G A PAAD 532616 + 532596 532636 41 CGAGGACACCAGCACCCTGGTGCACCCTGAGCTGCAACCTG CGAGGACACCAGCACCCTGGTACACCCTGAGCTGCAACCTG < 41bp 0.518937644775894 0.885733062437249 0.2730164 0.6447654 prediction 0.73359083532271 Functional Gain - RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:532616 chr16:532617 synonymous SNV . 0 22 hPsi_associated_SNPs_19595 0 0 1 0 0 Ribosome 0.438718569361597 0.438717389714012 0.2895308 0 hPsi_site_13319 iPseU_CNN:0.2895308;iRNA_PseU:0 13320 chr1 161137894 161137894 1 + G A BRCA 161137893 + 161137873 161137913 41 GATGAGACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC GATGAGACTGTGCACAGTTTTACCCAGCGCCGCCTTGGACC < 41bp 0.493043868568851 0.866767793354893 0.34667575 0.72007257 prediction 0.733535586709787 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161137893 chr1:161137894 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19596 0 0 1 0 1 Cytosol 0.438638524596525 0.438700782517193 0.44014514 0 hPsi_site_13320 iPseU_CNN:0.44014514;iRNA_PseU:0 13321 chr17 4925690 4925690 1 + G A SARC 4925689 + 4925669 4925709 41 CGCCACGGGCGGGCTGAGATTGAGGCCCTGGCCGCCCTCAA CGCCACGGGCGGGCTGAGATTAAGGCCCTGGCCGCCCTCAA < 41bp 0.470155038433975 0.866764633546148 0.29603738 0.4068709 prediction 0.733529267092295 Functional Gain - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4925689 chr17:4925690 nonsynonymous SNV 0.982 3 22 hPsi_associated_SNPs_19597 0 0 1 0 0 Ribosome 0.438718577974315 0.438718592995102 0 0 hPsi_site_13321 iPseU_CNN:0;iRNA_PseU:0 13322 chr8 22059361 22059361 1 + G A UCEC 22059360 + 22059340 22059380 41 ACGGCGGCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGT ACGGCGGCTGCCAGCAGGACTACGTCAACACGTTCGGCAGT < 41bp 0.500707948080164 0.867437218046367 0.23813319 0.7184106 prediction 0.733458539932406 Functional Gain - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22059360 chr8:22059361 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19598 0 0 0 0 1 Endoplasmic reticulum 0.438722966636833 0.438678589544278 0.4368212 0 hPsi_site_13322 iPseU_CNN:0.4368212;iRNA_PseU:0 13323 chr5 131657972 131657972 1 + G A BLCA 131657971 + 131657951 131657991 41 TATATGCTGCTGCCACTGTTTGCTTACTTCATCAGAGACTG TATATGCTGCTGCCACTGTTTACTTACTTCATCAGAGACTG < 41bp 0.514184372627313 0.880902524897411 0.20876563 0.48753923 prediction 0.733436304540197 Functional Gain - SLC22A4 ENSG00000197208 CDS Human protein_coding chr5:131657971 chr5:131657972 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19599 0 0 0 0 2 Endoplasmic reticulum 0.438918429657726 0.44090502829304 0 0 hPsi_site_13323 iPseU_CNN:0;iRNA_PseU:0 13324 chr16 8738476 8738476 1 + G A GBM 8738475 + 8738455 8738495 41 CCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAG CCTACGATCACTTCCGCTCCTACCTGCACGCGCTGGAGCAG < 41bp 0.482400172144999 0.86670054372911 0.34303957 0.8820706 prediction 0.733401087458219 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8738475 chr16:8738476 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_19600 0 0 1 0 1 Cytosol 0.438718137345072 0.438718533630211 0.7641412 0 hPsi_site_13324 iPseU_CNN:0.7641412;iRNA_PseU:0 13325 chr11 65350457 65350457 1 + G A TGCT 65350456 + 65350436 65350476 41 GAGACTGGGGCAGCAGAAGGTGCGATATTGGGGACCCAAGA GAGACTGGGGCAGCAGAAGGTACGATATTGGGGACCCAAGA < 41bp 0.497801336496271 0.866694542802748 0.1611081 0.2694625 prediction 0.733389085605496 Functional Gain - EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65350456 chr11:65350457 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_19601 0 0 1 0 0 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_13325 iPseU_CNN:0;iRNA_PseU:0 13326 chr16 31426237 31426237 1 + G A LUAD 31426236 + 31426216 31426256 41 GCACCTCAACTTCTCACTGGTGAGAGAGCCCATCCCCTCCC GCACCTCAACTTCTCACTGGTAAGAGAGCCCATCCCCTCCC < 41bp 0.518888887367521 0.885574426758102 0.30031675 0.71505773 prediction 0.733371078781162 Functional Gain - ITGAD ENSG00000156886 CDS Human protein_coding chr16:31426236 chr16:31426237 synonymous SNV . 0 22 hPsi_associated_SNPs_19602 0 0 0 0 2 nucleolus 0.438718767916006 0.438718592995102 0.43011546 0 hPsi_site_13326 iPseU_CNN:0.43011546;iRNA_PseU:0 13327 chr4 6302665 6302665 1 + G A rs151153967 6302664 + 6302644 6302684 41 CCGCACCCTCACCGACCTGCTGCTGCGCTTCGAGCCCAACC CCGCACCCTCACCGACCTGCTACTGCGCTTCGAGCCCAACC < 41bp 0.488157472924781 0.866682744610938 0.3350242 0.84320825 prediction 0.733365489221876 Functional Gain - WFS1 ENSG00000109501 CDS Human protein_coding chr4:6302664 chr4:6302665 synonymous SNV . 0 22 hPsi_associated_SNPs_19603 1 0 0 0 0 nucleus 0.438625035828891 0.438678294843869 0.6864165 0 hPsi_site_13327 iPseU_CNN:0.6864165;iRNA_PseU:0 13328 chr12 48578275 48578275 1 + G A SKCM 48578274 + 48578254 48578294 41 GAGCCGGAGACTCCTTCGCCTGGGATCGGGGACAGCGGCTT GAGCCGGAGACTCCTTCGCCTAGGATCGGGGACAGCGGCTT < 41bp 0.505626071867211 0.872308419197058 0.17575887 0.29733312 prediction 0.733364694659694 Functional Gain - CCDC184 ENSG00000177875 CDS Human protein_coding chr12:48578274 chr12:48578275 nonsynonymous SNV 0.231 1 22 hPsi_associated_SNPs_19604 0 0 0 0 0 exosome 0.438718569581881 0.438716216638734 0 0 hPsi_site_13328 iPseU_CNN:0;iRNA_PseU:0 13329 chr4 8607895 8607895 1 + G A SKCM 8607894 + 8607874 8607914 41 TCCATGAACCCTGACGGCTATGAGGTGGCAGCTGCCGAGGT TCCATGAACCCTGACGGCTATAAGGTGGCAGCTGCCGAGGT < 41bp 0.493170767472 0.86668176719314 0.2316558 0.3283055 prediction 0.73336353438628 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8607894 chr4:8607895 nonsynonymous SNV 0.442 3 22 hPsi_associated_SNPs_19605 0 0 0 0 1 Endoplasmic reticulum 0.438718517080479 0.438710296668546 0 0 hPsi_site_13329 iPseU_CNN:0;iRNA_PseU:0 13330 chr8 144644474 144644474 1 + G A COAD 144644473 + 144644453 144644493 41 GTTGTCCTCCGGAATGCTGGTGCCGGAACTCGCTATCCCTG GTTGTCCTCCGGAATGCTGGTACCGGAACTCGCTATCCCTG < 41bp 0.488752436221389 0.866674845108762 0.2646898 0.9220741 prediction 0.733349690217523 Functional Gain - GSDMD ENSG00000104518 CDS Human protein_coding chr8:144644473 chr8:144644474 synonymous SNV . 0 22 hPsi_associated_SNPs_19606 0 0 1 0 2 Ribosome 0.438719478068573 0.438715031549677 0.8441482 0 hPsi_site_13330 iPseU_CNN:0.8441482;iRNA_PseU:0 13331 chr8 94935181 94935181 1 + G A COAD 94935180 + 94935160 94935200 41 TAGCAGAGCCATGCTGGGTGTGCAGGAAGAGGACGGCTCAT TAGCAGAGCCATGCTGGGTGTACAGGAAGAGGACGGCTCAT < 41bp 0.486303960365634 0.866664789497491 0.1938555 0.31902683 prediction 0.733329578994982 Functional Gain - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935180 chr8:94935181 synonymous SNV . 0 22 hPsi_associated_SNPs_19607 0 0 0 0 0 Ribosome 0.432203225635825 0.438919533645566 0 0 hPsi_site_13331 iPseU_CNN:0;iRNA_PseU:0 13332 chr11 63883811 63883811 1 + G A SKCM 63883810 + 63883790 63883830 41 TGTCACGGCCACCGTTGTGATGACCACGGCCACCATGGACC TGTCACGGCCACCGTTGTGATAACCACGGCCACCATGGACC < 41bp 0.505061294768477 0.871721264316213 0.29048508 0.5259565 prediction 0.73331993909547 Functional Gain - FLRT1 ENSG00000126500 CDS Human protein_coding chr11:63883810 chr11:63883811 nonsynonymous SNV 0.290 0 22 hPsi_associated_SNPs_19608 0 0 0 0 0 chromatin 0.438718595242118 0.438718592995746 0.0519130000000001 0 hPsi_site_13332 iPseU_CNN:0.0519130000000001;iRNA_PseU:0 13333 chr20 43936847 43936847 1 + G A OV 43936846 + 43936826 43936866 41 GGACAGATCAGAGATGCAGCTGCAGAGCGAAGCCGACAGGC GGACAGATCAGAGATGCAGCTACAGAGCGAAGCCGACAGGC < 41bp 0.514448083953705 0.881103943981872 0.3597329 0.7257968 prediction 0.733311720056335 Functional Gain - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43936846 chr20:43936847 synonymous SNV . 0 22 hPsi_associated_SNPs_19609 0 0 0 0 2 unknown 0.438659448716038 0.4385682580588 0.4515936 0 hPsi_site_13333 iPseU_CNN:0.4515936;iRNA_PseU:0 13334 chr10 71835489 71835489 1 + G A LUSC 71835488 + 71835468 71835508 41 GGCAGGTGTCATCTTTCCAGTGGGGAGGCTGATGCGTTATC GGCAGGTGTCATCTTTCCAGTAGGGAGGCTGATGCGTTATC < 41bp 0.509187043632222 0.875825704550895 0.2510004 0.24813437 prediction 0.733277321837346 Functional Gain - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71835488 chr10:71835489 synonymous SNV . 0 22 hPsi_associated_SNPs_19610 0 0 1 0 1 Ribosome 0.438705127265819 0.438718592434733 0 0 hPsi_site_13334 iPseU_CNN:0;iRNA_PseU:0 13335 chr1 173455466 173455466 1 + G A BLCA 173455465 + 173455445 173455485 41 GCTACCACTGGCAGGAACTTTGATGAGATTCTCAGGGTAGT GCTACCACTGGCAGGAACTTTAATGAGATTCTCAGGGTAGT < 41bp 0.494781816105973 0.866636676387452 0.29353017 0.5288453 prediction 0.733273352774905 Functional Gain - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173455465 chr1:173455466 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19611 0 0 1 0 2 Ribosome 0.439530833764293 0.438572770203708 0.0576905999999999 0 hPsi_site_13335 iPseU_CNN:0.0576905999999999;iRNA_PseU:0 13336 chr8 98943684 98943684 1 + G A LUSC 98943683 + 98943663 98943703 41 AGTGAGCCCCATGAGGACCATGTCTTCCTTGTGGCCAATTT AGTGAGCCCCATGAGGACCATATCTTCCTTGTGGCCAATTT < 41bp 0.493636580623039 0.866627298848325 0.29480267 0.4309936 prediction 0.73325459769665 Functional Gain - MATN2 ENSG00000132561 CDS Human protein_coding chr8:98943683 chr8:98943684 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19612 0 0 0 0 1 Cytosol 0.438716811213824 0.438803465438671 0 0 hPsi_site_13336 iPseU_CNN:0;iRNA_PseU:0 13337 chr7 129096345 129096345 1 + G A LGG 129096344 + 129096324 129096364 41 GAAGCGGGCAGAATTGGGCCTGCCTCCACTGGCTGAAGACA GAAGCGGGCAGAATTGGGCCTACCTCCACTGGCTGAAGACA < 41bp 0.519326949651775 0.885950228186645 0.24054351 0.4926454 prediction 0.733246557069739 Functional Gain - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096344 chr7:129096345 synonymous SNV . 0 22 hPsi_associated_SNPs_19613 0 0 1 0 1 Nucleus 0.438718960039071 0.438719595319753 0 0 hPsi_site_13337 iPseU_CNN:0;iRNA_PseU:0 13338 chr19 44223113 44223113 1 + G A rs11555891 44223112 + 44223092 44223132 41 CAGGTAGACTTCAGCCGCTATGACTTCTTCCTGCTGGTCTC CAGGTAGACTTCAGCCGCTATAACTTCTTCCTGCTGGTCTC < 41bp 0.500651960744419 0.867272231422455 0.26671314 0.48146197 prediction 0.733240541356073 Functional Gain - IRGC ENSG00000124449 CDS Human protein_coding chr19:44223112 chr19:44223113 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_19614 0 0 0 0 0 unknown 0.438718592976715 0.438718593046802 0 0 hPsi_site_13338 iPseU_CNN:0;iRNA_PseU:0 13339 chr19 14515325 14515325 1 + G A ACC 14515324 + 14515304 14515344 41 ACGGCAGCACCACCTGCCAATGCAGCCACCTGAGCAGCTTT ACGGCAGCACCACCTGCCAATACAGCCACCTGAGCAGCTTT < 41bp 0.486153696870136 0.866612192656052 0.29783833 0.55329955 prediction 0.733224385312103 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14515324 chr19:14515325 nonsynonymous SNV 0.057 4 22 hPsi_associated_SNPs_19615 0 0 0 0 1 Cytosol 0.438719937350313 0.43875483516789 0.1065991 0 hPsi_site_13339 iPseU_CNN:0.1065991;iRNA_PseU:0 13340 chr3 14170986 14170986 1 + G A CESC 14170985 + 14170965 14171005 41 GCCAGGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGA GCCAGGCTTCCTGGAACGGCTAAGCGAGACCTCGGGTGGGA < 41bp 0.515117284365615 0.881722255293488 0.30269733 0.6789486 prediction 0.733209941855745 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14170985 chr3:14170986 synonymous SNV . 0 22 hPsi_associated_SNPs_19616 0 0 1 0 2 Ribosome 0.438726614661244 0.438718628411767 0.3578972 0 hPsi_site_13340 iPseU_CNN:0.3578972;iRNA_PseU:0 13341 chr14 105167744 105167744 1 + G A rs62638758 105167743 + 105167723 105167763 41 ACAGCGCAAGTGGGCAGCGCTGAAGGAGAAGCTGGGGCCAC ACAGCGCAAGTGGGCAGCGCTAAAGGAGAAGCTGGGGCCAC < 41bp 0.504448684914607 0.871049100119076 0.58430576 0.7003255 prediction 0.733200830408939 Functional Gain - INF2 ENSG00000203485 CDS Human protein_coding chr14:105167743 chr14:105167744 synonymous SNV . 0 22 hPsi_associated_SNPs_19617 2 0 1 0 1 Cytosol 0.438718574190031 0.438718076883284 0.23203948 0 hPsi_site_13341 iPseU_CNN:0.23203948;iRNA_PseU:0 13342 chr2 69002501 69002501 1 + G A BLCA 69002500 + 69002480 69002520 41 GCAGCAGAGGTACTTTGTGCTGAGGGCGCAGCAGCTCTACT GCAGCAGAGGTACTTTGTGCTAAGGGCGCAGCAGCTCTACT < 41bp 0.514714470616236 0.881304447684194 0.29830444 0.59419245 prediction 0.733179954135916 Functional Gain - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69002500 chr2:69002501 synonymous SNV . 0 22 hPsi_associated_SNPs_19618 0 0 0 0 1 chromatin 0.438705191759482 0.438733994859832 0.1883849 0 hPsi_site_13342 iPseU_CNN:0.1883849;iRNA_PseU:0 13343 chrX 103041628 103041628 1 + G A LUSC 103041627 + 103041607 103041647 41 GGAGCGGGTGTGTCATTGTTTGGGAAAATGGCTAGGACATC GGAGCGGGTGTGTCATTGTTTAGGAAAATGGCTAGGACATC < 41bp 0.511590746643134 0.878169057609865 0.41805464 0.54313 prediction 0.733156621933461 Functional Gain - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103041627 chrX:103041628 synonymous SNV . 0 22 hPsi_associated_SNPs_19619 0 0 0 0 1 Endoplasmic reticulum 0.438718592994763 0.438707476737108 0.08626 0 hPsi_site_13343 iPseU_CNN:0.08626;iRNA_PseU:0 13344 chr3 46306722 46306722 1 + G A SKCM 46306721 + 46306701 46306741 41 GATGACGTGGGCCTGCTCTGTGAAAAAGCTGATACCAGAGC GATGACGTGGGCCTGCTCTGTAAAAAAGCTGATACCAGAGC < 41bp 0.498168000647143 0.86657676742936 0.32642 0.61682725 prediction 0.733153534858721 Functional Gain - CCR3 ENSG00000183625 CDS Human protein_coding chr3:46306721 chr3:46306722 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_19620 0 0 0 0 1 exosome 0.438820772659822 0.435334148403566 0.2336545 0 hPsi_site_13344 iPseU_CNN:0.2336545;iRNA_PseU:0 13345 chr9 111625537 111625537 1 + G A STAD 111625536 + 111625516 111625556 41 ATGGGAAGGAGATTCAGCTGTGCCAGGAACGGTTCCTCTGC ATGGGAAGGAGATTCAGCTGTACCAGGAACGGTTCCTCTGC < 41bp 0.498550296007054 0.866575900949758 0.22530836 0.78099763 prediction 0.733151801899516 Functional Gain - ACTL7A ENSG00000187003 CDS Human protein_coding chr9:111625536 chr9:111625537 nonsynonymous SNV 0.102 1 22 hPsi_associated_SNPs_19621 0 0 0 0 0 unknown 0.438727761213112 0.438751398452552 0.56199526 0 hPsi_site_13345 iPseU_CNN:0.56199526;iRNA_PseU:0 13346 chr5 157178450 157178450 1 + G A SKCM 157178449 + 157178429 157178469 41 TCGCTGTATCCGTGAGGGGGTGAAGGTGAATGTTCACATCC TCGCTGTATCCGTGAGGGGGTAAAGGTGAATGTTCACATCC < 41bp 0.478477700839088 0.866567897093667 0.34443015 0.57699317 prediction 0.733135794187333 Functional Gain - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157178449 chr5:157178450 synonymous SNV . 0 22 hPsi_associated_SNPs_19622 0 0 1 0 2 Ribosome 0.438715733672648 0.438718352239279 0.15398634 0 hPsi_site_13346 iPseU_CNN:0.15398634;iRNA_PseU:0 13347 chrX 47422649 47422649 1 + G A UCEC 47422648 + 47422628 47422668 41 ACTGTCCGGGATGGCATGAGTGTCTACGACTCTCTAGACAA ACTGTCCGGGATGGCATGAGTATCTACGACTCTCTAGACAA < 41bp 0.507068377095438 0.8736110920554 0.32876968 0.6399962 prediction 0.733085429919925 Functional Gain - ARAF ENSG00000078061 CDS Human protein_coding chrX:47422648 chrX:47422649 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19623 0 0 1 0 2 Cytosol 0.438625266292264 0.438708844616679 0.2799924 0 hPsi_site_13347 iPseU_CNN:0.2799924;iRNA_PseU:0 13348 chr10 88988171 88988171 1 + G A rs549721717 88988170 + 88988150 88988190 41 TCCAGGCGGCCCTCTGGTGCTGTCTACCCTCCCCAGCACAC TCCAGGCGGCCCTCTGGTGCTATCTACCCTCCCCAGCACAC < 41bp 0.509882643535151 0.876423440203289 0.33191615 0.66090155 prediction 0.733081593336275 Functional Gain - NUTM2A ENSG00000184923 CDS Human protein_coding chr10:88988170 chr10:88988171 synonymous SNV . 0 22 hPsi_associated_SNPs_19624 0 0 0 0 0 exosome 0.437317983241987 0.436800792266266 0.3218031 0 hPsi_site_13348 iPseU_CNN:0.3218031;iRNA_PseU:0 13349 chr17 60765904 60765904 1 + G A SKCM 60765903 + 60765883 60765923 41 CCAATGTGACCTTTGACCTTTGGATTGGCCTCCATGCCTCG CCAATGTGACCTTTGACCTTTAGATTGGCCTCCATGCCTCG < 41bp 0.516008243932768 0.882537716511109 0.3229934 0.36686653 prediction 0.733058945156682 Functional Gain - MRC2 ENSG00000011028 CDS Human protein_coding chr17:60765903 chr17:60765904 stopgain 1.000 1 22 hPsi_associated_SNPs_19625 0 0 1 0 1 Cytosol 0.438719068904192 0.438718593001799 0 0 hPsi_site_13349 iPseU_CNN:0;iRNA_PseU:0 13350 chr16 69148368 69148368 1 + G A LUAD 69148367 + 69148347 69148387 41 GCAGTGTATTAGTGGGCCCTTGGGCATGTACCGCAACAGCC GCAGTGTATTAGTGGGCCCTTAGGCATGTACCGCAACAGCC < 41bp 0.489381888382126 0.866519333558942 0.15678209 0.25415385 prediction 0.733038667117884 Functional Gain - HAS3 ENSG00000103044 CDS Human protein_coding chr16:69148367 chr16:69148368 synonymous SNV . 0 22 hPsi_associated_SNPs_19626 0 0 0 0 0 nucleus 0.438814215891688 0.43881952175952 0 0 hPsi_site_13350 iPseU_CNN:0;iRNA_PseU:0 13351 chr12 7285714 7285714 1 + G A SKCM 7285713 + 7285693 7285733 41 GAATCCACCACTCTTTGCCTTGGACAAGGATGCCCCGCTGC GAATCCACCACTCTTTGCCTTAGACAAGGATGCCCCGCTGC < 41bp 0.488642405795313 0.866497159962902 0.1888828 0.27213782 prediction 0.732994319925804 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7285713 chr12:7285714 synonymous SNV . 0 22 hPsi_associated_SNPs_19627 0 0 1 0 2 Endoplasmic reticulum 0.438718592995011 0.438718592802582 0 0 hPsi_site_13351 iPseU_CNN:0;iRNA_PseU:0 13352 chr17 38031594 38031594 1 + G A KIRC 38031593 + 38031573 38031613 41 ACTCTACCAGCAATGCATTTTGTGGACCACAGTTTGCAAGT ACTCTACCAGCAATGCATTTTATGGACCACAGTTTGCAAGT < 41bp 0.497571843797689 0.866488631928711 0.23136994 0.35628307 prediction 0.732977263857422 Functional Gain - ZPBP2 ENSG00000186075 CDS Human protein_coding chr17:38031593 chr17:38031594 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_19628 0 0 0 0 2 exosome 0.438718419838576 0.438719279158076 0 0 hPsi_site_13352 iPseU_CNN:0;iRNA_PseU:0 13353 chr13 46287412 46287412 1 + G A SKCM 46287411 + 46287391 46287431 41 GCCCCGGCTGAGCCGCAGGATGGCGAGCCAGCACTCCTATC GCCCCGGCTGAGCCGCAGGATAGCGAGCCAGCACTCCTATC < 41bp 0.488074875157108 0.866477211553486 0.31679943 0.5544066 prediction 0.732954423106973 Functional Gain - SPERT ENSG00000174015 CDS Human protein_coding chr13:46287411 chr13:46287412 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_19629 0 0 0 0 1 exosome 0.438718795948085 0.438718589434916 0.1088132 0 hPsi_site_13353 iPseU_CNN:0.1088132;iRNA_PseU:0 13354 chr17 26864298 26864298 1 + G A LUAD 26864297 + 26864277 26864317 41 AGGCAGTGGGGCAGGTGACTTGGCAGCCCCGGGCAGTGGTG AGGCAGTGGGGCAGGTGACTTAGCAGCCCCGGGCAGTGGTG < 41bp 0.500009359960301 0.866478910237073 0.30588508 0.36095738 prediction 0.732939100553544 Functional Gain - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26864297 chr17:26864298 synonymous SNV . 0 22 hPsi_associated_SNPs_19630 0 0 0 0 0 exosome 0.438710579510527 0.438776463117869 0 0 hPsi_site_13354 iPseU_CNN:0;iRNA_PseU:0 13355 chr5 176005489 176005489 1 + G A HNSC 176005488 + 176005468 176005508 41 GGCCACAGACGGCGGGAACCTGTCCTCCTCCACCACACTGC GGCCACAGACGGCGGGAACCTATCCTCCTCCACCACACTGC < 41bp 0.521728610711197 0.888173798295923 0.19970295 0.3282687 prediction 0.732890375169453 Functional Gain - CDHR2 ENSG00000074276 CDS Human protein_coding chr5:176005488 chr5:176005489 synonymous SNV . 0 22 hPsi_associated_SNPs_19631 0 0 0 0 0 Exosome 0.438720494599974 0.438721051353191 0 0 hPsi_site_13355 iPseU_CNN:0;iRNA_PseU:0 13356 chr19 50027783 50027783 1 + G A UCEC 50027782 + 50027762 50027802 41 AGAGCCCCCCTCCATGCGCCTGAAGGCCCGACCCAGCAGCC AGAGCCCCCCTCCATGCGCCTAAAGGCCCGACCCAGCAGCC < 41bp 0.507068876355156 0.873512962559952 0.23332784 0.40689713 prediction 0.732888172409593 Functional Gain - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027782 chr19:50027783 synonymous SNV . 0 22 hPsi_associated_SNPs_19632 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0 0 hPsi_site_13356 iPseU_CNN:0;iRNA_PseU:0 13357 chr22 41615486 41615486 1 + G A BLCA 41615485 + 41615465 41615505 41 AAGGTGGAGGTGCTCAACAGTGATGCTGTGCTCCCCAGCCG AAGGTGGAGGTGCTCAACAGTAATGCTGTGCTCCCCAGCCG < 41bp 0.507711498586829 0.874137915830232 0.22944927 0.3057626 prediction 0.732852834486805 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41615485 chr22:41615486 nonsynonymous SNV 0.912 4 22 hPsi_associated_SNPs_19633 0 0 1 0 2 Ribosome 0.438716548319351 0.438717813649421 0 0 hPsi_site_13357 iPseU_CNN:0;iRNA_PseU:0 13358 chr5 140167468 140167468 1 + G A CESC 140167467 + 140167447 140167487 41 CCACGAGGAGCTGGAGCTGCTGCAGTTCCAGGTGAGCGCGC CCACGAGGAGCTGGAGCTGCTACAGTTCCAGGTGAGCGCGC < 41bp 0.508877362198602 0.875299479190833 0.5390646 0.677035 prediction 0.732844233984463 Functional Gain - PCDHA1 ENSG00000204970 CDS Human protein_coding chr5:140167467 chr5:140167468 synonymous SNV . 0 22 hPsi_associated_SNPs_19634 0 0 0 0 1 insoluble cytoplasm 0.438718671213006 0.438721293528873 0.2759408 0 hPsi_site_13358 iPseU_CNN:0.2759408;iRNA_PseU:0 13359 chr7 44721372 44721372 1 + G A HNSC 44721371 + 44721351 44721391 41 ATTTGCTGGCCAGGGCATTGTGTACGAGACCTTCCACCTCA ATTTGCTGGCCAGGGCATTGTATACGAGACCTTCCACCTCA < 41bp 0.519831759479705 0.886249216647211 0.3414523 0.6180048 prediction 0.732834914335013 Functional Gain - OGDH ENSG00000105953 CDS Human protein_coding chr7:44721371 chr7:44721372 synonymous SNV . 0 22 hPsi_associated_SNPs_19635 0 0 1 0 2 Nucleus 0.436688988317444 0.437599100349193 0.2360096 0 hPsi_site_13359 iPseU_CNN:0.2360096;iRNA_PseU:0 13360 chr19 13054408 13054408 1 + G A LUSC 13054407 + 13054387 13054427 41 ACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGAC ACCAACGATGAGGCATACGCTAAGGAGTTTGGCAACGAGAC < 41bp 0.483021341506627 0.866404685553227 0.30834877 0.6154124 prediction 0.732809371106454 Functional Gain - CALR ENSG00000179218 CDS Human protein_coding chr19:13054407 chr19:13054408 nonsynonymous SNV 0.532 1 22 hPsi_associated_SNPs_19636 0 0 1 0 2 Ribosome 0.438904733373464 0.43871920737375 0.2308248 0 hPsi_site_13360 iPseU_CNN:0.2308248;iRNA_PseU:0 13361 chrX 49142890 49142890 1 + G A SKCM 49142889 + 49142869 49142909 41 CCTGATGATGAAGGGGAGGGTGAAGAGGGGCTCTCTGTCAC CCTGATGATGAAGGGGAGGGTAAAGAGGGGCTCTCTGTCAC < 41bp 0.507868670831866 0.874267166437712 0.436244 0.62115765 prediction 0.732796991211693 Functional Gain - PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49142889 chrX:49142890 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_19637 0 0 1 0 0 Endoplasmic reticulum 0.43871859293702 0.438718592995102 0.2423153 0 hPsi_site_13361 iPseU_CNN:0.2423153;iRNA_PseU:0 13362 chr1 87208040 87208040 1 + G A UCEC 87208039 + 87208019 87208059 41 ACCTCAGTGACCTTAAGGAGTGTAGTGGCAGCAGAAAGGCC ACCTCAGTGACCTTAAGGAGTATAGTGGCAGCAGAAAGGCC < 41bp 0.507248174645414 0.873628297372492 0.30993173 0.4023664 prediction 0.732760245454157 Functional Gain - SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208039 chr1:87208040 nonsynonymous SNV 0.933 0 22 hPsi_associated_SNPs_19638 0 0 1 0 1 Ribosome 0.438718594197505 0.438718641067685 0 0 hPsi_site_13362 iPseU_CNN:0;iRNA_PseU:0 13363 chr10 5979192 5979192 1 + G A SARC 5979191 + 5979171 5979211 41 GCGCGCCATGGAGCGCACTGTGGAGAACATCGTACTGCCCC GCGCGCCATGGAGCGCACTGTAGAGAACATCGTACTGCCCC < 41bp 0.503079966213063 0.869450500819543 0.32778382 0.92079794 prediction 0.73274106921296 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5979191 chr10:5979192 synonymous SNV . 0 22 hPsi_associated_SNPs_19639 0 0 0 0 0 Ribosome 0.438616280092353 0.434159868315785 0.84159588 0 hPsi_site_13363 iPseU_CNN:0.84159588;iRNA_PseU:0 13364 chr7 101960850 101960850 1 + G A LGG 101960849 + 101960829 101960869 41 AGTGTCACGTACAGCATCTGTGGTTCCAGTCTGTGCTTGAC AGTGTCACGTACAGCATCTGTAGTTCCAGTCTGTGCTTGAC < 41bp 0.508084852228169 0.874446257915392 0.2738257 0.44684318 prediction 0.732722811374447 Functional Gain - SH2B2 ENSG00000160999 CDS Human protein_coding chr7:101960849 chr7:101960850 stopgain 1.000 1 22 hPsi_associated_SNPs_19640 0 0 0 0 1 nucleoplasm 0.437445825786772 0.438743822665314 0 0 hPsi_site_13364 iPseU_CNN:0;iRNA_PseU:0 13365 chr9 71606110 71606110 1 + G A HNSC 71606109 + 71606089 71606129 41 GGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTC GGAAGAGGGGACCATCTACTTAACCGCTGAGCCCAACACTC < 41bp 0.502089392359125 0.868448901149493 0.2097421 0.338943 prediction 0.732719017580736 Functional Gain - PIP5K1B ENSG00000107242 CDS Human protein_coding chr9:71606109 chr9:71606110 synonymous SNV . 0 22 hPsi_associated_SNPs_19641 0 0 1 0 2 Endoplasmic reticulum 0.438705171722572 0.438718592995099 0 0 hPsi_site_13365 iPseU_CNN:0;iRNA_PseU:0 13366 chr10 47087266 47087266 1 + G A PRAD 47087265 + 47087245 47087285 41 ACAGGCCTACCTGGGGATTGTGCTCATCTGGGTCATTGCCT ACAGGCCTACCTGGGGATTGTACTCATCTGGGTCATTGCCT < 41bp 0.48613580314106 0.86635348499088 0.23643735 0.6812845 prediction 0.732706969981761 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087265 chr10:47087266 synonymous SNV . 0 22 hPsi_associated_SNPs_19642 0 0 1 0 0 unknown 0.438718281184102 0.438686727974215 0.362569 0 hPsi_site_13366 iPseU_CNN:0.362569;iRNA_PseU:0 13367 chr10 118957092 118957092 1 + G A UCEC 118957091 + 118957071 118957111 41 CTGCTTCCTCTGCTTTCTGGTGACCTACGCCCTGGTGGGTG CTGCTTCCTCTGCTTTCTGGTAACCTACGCCCTGGTGGGTG < 41bp 0.501843389594178 0.868187806961879 0.22153684 0.5185601 prediction 0.732688834735401 Functional Gain - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118957091 chr10:118957092 synonymous SNV . 0 22 hPsi_associated_SNPs_19643 0 0 0 0 0 unknown 0.438718592914416 0.438718600318607 0.0371201999999999 0 hPsi_site_13367 iPseU_CNN:0.0371201999999999;iRNA_PseU:0 13368 chr6 41895225 41895225 1 + G A LUAD 41895224 + 41895204 41895244 41 GCAGAGGTGGTTGTGGACCCTGAGGATGAGCGTGCCATAGA GCAGAGGTGGTTGTGGACCCTAAGGATGAGCGTGCCATAGA < 41bp 0.482157116635067 0.866313219297139 0.27571827 0.32151765 prediction 0.732626438594278 Functional Gain - BYSL ENSG00000112578 CDS Human protein_coding chr6:41895224 chr6:41895225 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_19644 0 0 1 0 1 Ribosome 0.43861008580971 0.438718590728786 0 0 hPsi_site_13368 iPseU_CNN:0;iRNA_PseU:0 13369 chr4 1347144 1347144 1 + G A rs150164998 1347143 + 1347123 1347163 41 GACAGCGACCTCGAGGAGTTTGTGCGGAGCCACGGGCTGGG GACAGCGACCTCGAGGAGTTTATGCGGAGCCACGGGCTGGG < 41bp 0.517204905539124 0.883517526979429 0.60784 0.54312235 prediction 0.732625242880609 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1347143 chr4:1347144 nonsynonymous SNV 0.166 1 22 hPsi_associated_SNPs_19645 0 0 1 0 1 Nucleus 0.438718585234238 0.438717694529195 0 0 hPsi_site_13369 iPseU_CNN:0;iRNA_PseU:0 13370 chr2 219526522 219526522 1 + G A CESC 219526521 + 219526501 219526541 41 GCAGGAGGAAGGGAAGACCGTGATGTACACAGCTGTGGGCT GCAGGAGGAAGGGAAGACCGTAATGTACACAGCTGTGGGCT < 41bp 0.473789854127915 0.866301652508028 0.3246249 0.7240289 prediction 0.732603305016056 Functional Gain - BCS1L ENSG00000074582 CDS Human protein_coding chr2:219526521 chr2:219526522 synonymous SNV . 0 22 hPsi_associated_SNPs_19646 0 0 1 0 1 chromatin 0.438718176600437 0.438718595178655 0.4480578 0 hPsi_site_13370 iPseU_CNN:0.4480578;iRNA_PseU:0 13371 chr17 74772498 74772498 1 + G A STAD 74772497 + 74772477 74772517 41 ATTTTCTTCAGCAAAGAAGTTGCCATTCTCTGCAGTTTTCT ATTTTCTTCAGCAAAGAAGTTACCATTCTCTGCAGTTTTCT < 41bp 0.494321311421676 0.866294886334771 0.36935383 0.63368815 prediction 0.732589772669541 Functional Gain - MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74772497 chr17:74772498 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_19647 0 0 0 0 1 Endoplasmic reticulum 0.448915358082077 0.438850624953685 0.2673763 0 hPsi_site_13371 iPseU_CNN:0.2673763;iRNA_PseU:0 13372 chr16 89256854 89256854 1 + G A SKCM 89256853 + 89256833 89256873 41 GGCACCCCCAGGCACTCTGGTGGCCACCTTCTCTGCCCGGG GGCACCCCCAGGCACTCTGGTAGCCACCTTCTCTGCCCGGG < 41bp 0.481028879721415 0.866285534994944 0.33856505 0.60839564 prediction 0.732571069989887 Functional Gain - CDH15 ENSG00000129910 CDS Human protein_coding chr16:89256853 chr16:89256854 synonymous SNV . 0 22 hPsi_associated_SNPs_19648 0 0 0 0 1 nucleus 0.438719967540048 0.438718593113491 0.21679128 0 hPsi_site_13372 iPseU_CNN:0.21679128;iRNA_PseU:0 13373 chr4 4864663 4864663 1 + G A SKCM 4864662 + 4864642 4864682 41 GAGACTACAAGAGGCAGAGCTGGAGAAGCTGAAGATGGCCG GAGACTACAAGAGGCAGAGCTAGAGAAGCTGAAGATGGCCG < 41bp 0.497806151397127 0.866280030114218 0.3112604 0.33817595 prediction 0.732560060228435 Functional Gain - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864662 chr4:4864663 synonymous SNV . 0 22 hPsi_associated_SNPs_19649 0 0 1 0 0 Cytosol 0.439835977389092 0.438718578335039 0 0 hPsi_site_13373 iPseU_CNN:0;iRNA_PseU:0 13374 chr9 116811445 116811445 1 + G A rs61745986 116811444 + 116811424 116811464 41 GTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCA GTACGTGACGGATTGCCGGGTAAGCACGTCCGCCTTCTCCA < 41bp 0.505485244664874 0.87174708565818 0.25648814 0.5030903 prediction 0.732523681986611 Functional Gain - ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116811444 chr9:116811445 synonymous SNV . 0 22 hPsi_associated_SNPs_19650 0 0 1 0 0 Cytosol 0.438596659198181 0.438722710050878 0.00618059999999998 0 hPsi_site_13374 iPseU_CNN:0.00618059999999998;iRNA_PseU:0 13375 chr11 114168699 114168699 1 + G A BLCA 114168698 + 114168678 114168718 41 GTGAAGGGAGACCTGCTGATTGACATCGGCTCTGGCCCCAC GTGAAGGGAGACCTGCTGATTAACATCGGCTCTGGCCCCAC < 41bp 0.509358201429115 0.875608889146158 0.29855096 0.54816055 prediction 0.732501375434086 Functional Gain - NNMT ENSG00000166741 CDS Human protein_coding chr11:114168698 chr11:114168699 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19651 0 0 1 0 1 Cytosol 0.435253017685546 0.438718570140766 0.0963210999999999 0 hPsi_site_13375 iPseU_CNN:0.0963210999999999;iRNA_PseU:0 13376 chr7 140373519 140373519 1 + G A COAD 140373518 + 140373498 140373538 41 CTCCCAGCGTCTCCACCCTCTGGCTCCACCTGCTTCTGAAA CTCCCAGCGTCTCCACCCTCTAGCTCCACCTGCTTCTGAAA < 41bp 0.506735061663125 0.872979484097753 0.25865936 0.5772024 prediction 0.732488844869256 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373518 chr7:140373519 stopgain 0.998 1 22 hPsi_associated_SNPs_19652 0 0 1 0 0 Ribosome 0.438718592990212 0.438719046928178 0.1544048 0 hPsi_site_13376 iPseU_CNN:0.1544048;iRNA_PseU:0 13377 chr1 167095181 167095181 1 + G A SKCM 167095180 + 167095160 167095200 41 TGAGGGCTTCCTGAAGCAGCTGCGGGAGCTCAATGAGAAGT TGAGGGCTTCCTGAAGCAGCTACGGGAGCTCAATGAGAAGT < 41bp 0.503662150177417 0.869899820351761 0.31020045 0.6448022 prediction 0.732475340348688 Functional Gain - DUSP27 ENSG00000198842 CDS Human protein_coding chr1:167095180 chr1:167095181 synonymous SNV . 0 22 hPsi_associated_SNPs_19653 0 0 0 0 0 Endoplasmic reticulum 0.438717304619774 0.438719674193382 0.2896044 0 hPsi_site_13377 iPseU_CNN:0.2896044;iRNA_PseU:0 13378 chr1 110594385 110594385 1 + G A LUAD 110594384 + 110594364 110594404 41 CATGATGCAGCTCTATGTGCTGAAGCTGCTCAAGGTACAGA CATGATGCAGCTCTATGTGCTAAAGCTGCTCAAGGTACAGA < 41bp 0.510676497876468 0.876909530334973 0.5020319 0.64414215 prediction 0.73246606491701 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110594384 chr1:110594385 synonymous SNV . 0 22 hPsi_associated_SNPs_19654 0 0 1 0 1 Cytosol 0.438698397469986 0.438665961715446 0.2842205 0 hPsi_site_13378 iPseU_CNN:0.2842205;iRNA_PseU:0 13379 chr10 71868904 71868904 1 + G A UCEC 71868903 + 71868883 71868923 41 AGAGACCATCAAAAACTGCCTGTCAGCGGCGGAGGACAAGA AGAGACCATCAAAAACTGCCTATCAGCGGCGGAGGACAAGA < 41bp 0.48825142916748 0.866208161273141 0.10952255 0.16043696 prediction 0.732416322546283 Functional Gain - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71868903 chr10:71868904 synonymous SNV . 0 22 hPsi_associated_SNPs_19655 0 0 1 0 1 Ribosome 0.438718689981274 0.43871842950142 0 0 hPsi_site_13379 iPseU_CNN:0;iRNA_PseU:0 13380 chrX 1533772 1533772 1 + G A rs767672129 1533771 + 1533751 1533791 41 GTGGAGGTCCCCAGCACCTGTGCCCACAGGCCTGGCCGCTG GTGGAGGTCCCCAGCACCTGTACCCACAGGCCTGGCCGCTG < 41bp 0.498986322989948 0.866205928565248 0.25847146 0.5900538 prediction 0.732411857130496 Functional Gain - ASMTL-AS1 ENSG00000169093 intronic Human protein_coding chrX:1533771 chrX:1533772 . . 0 22 hPsi_associated_SNPs_19656 0 0 0 0 0 unknown 0.438718570943246 0.438712318653858 0.1801076 0 hPsi_site_13380 iPseU_CNN:0.1801076;iRNA_PseU:0 13381 chr22 24106287 24106287 1 + G A KIRP 24106286 + 24106266 24106306 41 CTCCACAGCTGGCTGCTCGGTGCTGGTGAACACCTCTTGCA CTCCACAGCTGGCTGCTCGGTACTGGTGAACACCTCTTGCA < 41bp 0.480868512965161 0.866189969501077 0.34663492 0.93485063 prediction 0.732379939002154 Functional Gain - C22orf15 ENSG00000169314 CDS Human protein_coding chr22:24106286 chr22:24106287 synonymous SNV . 0 22 hPsi_associated_SNPs_19657 0 0 0 0 2 chromatin 0.438649150569932 0.437545054705679 0.86970126 0 hPsi_site_13381 iPseU_CNN:0.86970126;iRNA_PseU:0 Eczema 13382 chr4 40356159 40356159 1 + G A UCEC 40356158 + 40356138 40356178 41 GGTCTTGTTTGTCTATGATGTGGGTGAAAGCTGCCTCAGCC GGTCTTGTTTGTCTATGATGTAGGTGAAAGCTGCCTCAGCC < 41bp 0.499519508323142 0.866174604715269 0.37795916 0.7905901 prediction 0.732349209430538 Functional Gain - CHRNA9 ENSG00000174343 CDS Human protein_coding chr4:40356158 chr4:40356159 synonymous SNV . 0 22 hPsi_associated_SNPs_19658 0 0 1 0 0 nucleus 0.438718583383321 0.438499668303956 0.5811802 0 hPsi_site_13382 iPseU_CNN:0.5811802;iRNA_PseU:0 13383 chr10 47000024 47000024 1 + G A UCEC 47000023 + 47000003 47000043 41 GTGCCGTCCCCTGTGCGGGATGTGCGATGGGATGCTGAGGG GTGCCGTCCCCTGTGCGGGATATGCGATGGGATGCTGAGGG < 41bp 0.507819400138784 0.873985670854825 0.22477594 0.25697735 prediction 0.732332541432082 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:47000023 chr10:47000024 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19659 0 0 0 0 0 exosome 0.438999662075844 0.439271708896925 0 0 hPsi_site_13383 iPseU_CNN:0;iRNA_PseU:0 13384 chr6 167755063 167755063 1 + G A rs34931196 167755062 + 167755042 167755082 41 CAAGCAGGCAACTTTGTTCTTGTTTTTCCTTTCAATGAAGC CAAGCAGGCAACTTTGTTCTTATTTTTCCTTTCAATGAAGC < 41bp 0.499864501253883 0.866160002165702 0.19357455 0.22750339 prediction 0.732320004331404 Functional Gain - TTLL2 ENSG00000120440 CDS Human protein_coding chr6:167755062 chr6:167755063 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_19660 0 0 0 1 0 Exosome 0.438718611564589 0.438718593854406 0 0 hPsi_site_13384 iPseU_CNN:0;iRNA_PseU:0 13385 chrX 117959282 117959282 1 + G A PRAD 117959281 + 117959261 117959301 41 GCCGCCTTGGGCCCATTCCATGCTGAGGTCCCTGGGGAGAA GCCGCCTTGGGCCCATTCCATACTGAGGTCCCTGGGGAGAA < 41bp 0.491011540093998 0.866154401555184 0.2944116 0.60279256 prediction 0.732308803110368 Functional Gain - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117959281 chrX:117959282 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_19661 0 0 1 0 0 exosome 0.438718753147228 0.438718612552737 0.20558512 0 hPsi_site_13385 iPseU_CNN:0.20558512;iRNA_PseU:0 13386 chr1 8385384 8385384 1 + G A GBM 8385383 + 8385363 8385403 41 CTACTGCAGCCTCTGTTGGGTGCTTGGAGTGACCGGTGTAC CTACTGCAGCCTCTGTTGGGTACTTGGAGTGACCGGTGTAC < 41bp 0.483396038041539 0.86614493848268 0.23744193 0.53960204 prediction 0.73228987696536 Functional Gain - SLC45A1 ENSG00000162426 CDS Human protein_coding chr1:8385383 chr1:8385384 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19662 0 0 0 0 2 exosome 0.428285549948685 0.437352698075368 0.07920408 0 hPsi_site_13386 iPseU_CNN:0.07920408;iRNA_PseU:0 13387 chrX 79286146 79286146 1 + G A LGG 79286145 + 79286125 79286165 41 CCAGAGGCATACCTGCCCAATGTCAACCTGCCTCTATGCTA CCAGAGGCATACCTGCCCAATATCAACCTGCCTCTATGCTA < 41bp 0.505731725749362 0.871869488041587 0.36830956 0.6316526 prediction 0.732275524584449 Functional Gain - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79286145 chrX:79286146 nonsynonymous SNV 0.248 0 22 hPsi_associated_SNPs_19663 0 0 0 0 0 unknown 0.438687769483313 0.438726290008378 0.2633052 0 hPsi_site_13387 iPseU_CNN:0.2633052;iRNA_PseU:0 13388 chr17 41003657 41003657 1 + G A SKCM 41003656 + 41003636 41003676 41 GGACAACTGTGTCTTCTCAGTGGAGTTGCAGCTGCCTCCCA GGACAACTGTGTCTTCTCAGTAGAGTTGCAGCTGCCTCCCA < 41bp 0.480866240461634 0.866134594170568 0.44303823 0.64259565 prediction 0.732269188341137 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41003656 chr17:41003657 synonymous SNV . 0 22 hPsi_associated_SNPs_19664 0 0 0 0 0 Cytosol 0.4387185939792 0.438675852349109 0.2851913 0 hPsi_site_13388 iPseU_CNN:0.2851913;iRNA_PseU:0 13389 chr7 140125875 140125875 1 + G A rs544128497 140125874 + 140125854 140125894 41 CCTATATGGGGAGAGTGCCCTGAACGGCCTCCCCCTGGACT CCTATATGGGGAGAGTGCCCTAAACGGCCTCCCCCTGGACT < 41bp 0.507475880789151 0.873607916781582 0.27614117 0.5993375 prediction 0.732264071984862 Functional Gain - RAB19 ENSG00000146955 CDS Human protein_coding chr7:140125874 chr7:140125875 synonymous SNV . 0 22 hPsi_associated_SNPs_19665 0 0 0 0 0 exosome 0.438719191775075 0.438718592995117 0.198675 0 hPsi_site_13389 iPseU_CNN:0.198675;iRNA_PseU:0 13390 chr19 4283070 4283070 1 + G A UCEC 4283069 + 4283049 4283089 41 AGAACTTCCCGGCAGAGGGGTGCAGCTCTATGACACCCCTT AGAACTTCCCGGCAGAGGGGTACAGCTCTATGACACCCCTT < 41bp 0.498375724538996 0.866130608493375 0.36769348 0.78932416 prediction 0.73226121698675 Functional Gain - SHD ENSG00000105251 CDS Human protein_coding chr19:4283069 chr19:4283070 synonymous SNV . 0 22 hPsi_associated_SNPs_19666 0 0 0 0 1 exosome 0.438718592995102 0.438718592959473 0.57864832 0 hPsi_site_13390 iPseU_CNN:0.57864832;iRNA_PseU:0 13391 chr6 43096795 43096795 1 + G A BLCA 43096794 + 43096774 43096814 41 CGCCGGGCGCTGCTTCGCTGTGAGGTTGAGGCTCCGGGCCC CGCCGGGCGCTGCTTCGCTGTAAGGTTGAGGCTCCGGGCCC < 41bp 0.475763133167299 0.866112799684764 0.32502955 0.66601306 prediction 0.732225599369528 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43096794 chr6:43096795 nonsynonymous SNV 0.878 2 22 hPsi_associated_SNPs_19667 0 0 1 0 1 Endoplasmic reticulum 0.438724917469291 0.438718592375421 0.33202612 0 hPsi_site_13391 iPseU_CNN:0.33202612;iRNA_PseU:0 13392 chr16 19195419 19195419 1 + G A SKCM 19195418 + 19195398 19195438 41 TCTGTGCCTTTGTGTGAAGTTGACCTGGTCAAGGGCGGGCA TCTGTGCCTTTGTGTGAAGTTAACCTGGTCAAGGGCGGGCA < 41bp 0.487052510397414 0.866103304300102 0.20654213 0.2774884 prediction 0.732206608600203 Functional Gain - SYT17 ENSG00000103528 CDS Human protein_coding chr16:19195418 chr16:19195419 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_19668 0 0 0 0 1 exosome 0.438962751955588 0.438811884762966 0 0 hPsi_site_13392 iPseU_CNN:0;iRNA_PseU:0 13393 chr16 68371409 68371409 1 + G A UCEC 68371408 + 68371388 68371428 41 ATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGA ATCCTGGTCACAGAGTTGTTTAACACAGAGCTGATCGGGGA < 41bp 0.486807668720392 0.866092539011011 0.34256616 0.58286786 prediction 0.732185078022021 Functional Gain - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68371408 chr16:68371409 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19669 0 0 1 0 2 Nucleus 0.441685357090837 0.438721867487024 0.16573572 0 hPsi_site_13393 iPseU_CNN:0.16573572;iRNA_PseU:0 13394 chr2 217279554 217279554 1 + G A rs2066524 217279553 + 217279533 217279573 41 ACTAGCTCGGGCACCTCCATTGCTGGCAACCCATTCCAGGC ACTAGCTCGGGCACCTCCATTACTGGCAACCCATTCCAGGC < 41bp 0.511969079233938 0.878060199770889 0.2399132 0.35161412 prediction 0.732182241073902 Functional Gain - SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217279553 chr2:217279554 nonsynonymous SNV 0.113 0 22 hPsi_associated_SNPs_19670 2 0 1 0 0 chromatin 0.438718518351733 0.438716731336893 0 0 hPsi_site_13394 iPseU_CNN:0;iRNA_PseU:0 13395 chr15 75122507 75122507 1 + G A LUSC 75122506 + 75122486 75122526 41 AGCCAGATCCAGATGGCAGGTGGAGACGTGGAGCTGCCCCG AGCCAGATCCAGATGGCAGGTAGAGACGTGGAGCTGCCCCG < 41bp 0.508727705598217 0.874810621226834 0.27319932 0.5292393 prediction 0.732165831257234 Functional Gain - CPLX3 ENSG00000213578 CDS Human protein_coding chr15:75122506 chr15:75122507 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_19671 0 0 0 0 1 exosome 0.438717769645454 0.438718592648577 0.0584785999999999 0 hPsi_site_13395 iPseU_CNN:0.0584785999999999;iRNA_PseU:0 13396 chr16 105814 105814 1 + G A rs79411281 105813 + 105793 105833 41 GAGTGCCACAGTCCTGGACCTGAAGAAGGCCATCCAGAGAT GAGTGCCACAGTCCTGGACCTAAAGAAGGCCATCCAGAGAT < 41bp 0.482273982959284 0.866079779240236 0.28303057 0.3654689 prediction 0.732159558480472 Functional Gain - SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:105813 chr16:105814 synonymous SNV . 0 22 hPsi_associated_SNPs_19672 0 0 1 0 2 Ribosome 0.438718028487656 0.438718591348564 0 0 hPsi_site_13396 iPseU_CNN:0;iRNA_PseU:0 13397 chr12 120750276 120750276 1 + G A UCEC 120750275 + 120750255 120750295 41 CCAGGGTCCTGTGCTTGGATTGTGGGGAACAGACTCCCCGG CCAGGGTCCTGTGCTTGGATTATGGGGAACAGACTCCCCGG < 41bp 0.483607762462638 0.866062527743781 0.6072586 0.7462551 prediction 0.732125055487563 Functional Gain - SIRT4 ENSG00000089163 CDS Human protein_coding chr12:120750275 chr12:120750276 nonsynonymous SNV 0.910 4 22 hPsi_associated_SNPs_19673 0 0 0 0 0 Cytosol 0.438718592994745 0.438718592986567 0.277993 0 hPsi_site_13397 iPseU_CNN:0.277993;iRNA_PseU:0 13398 chr15 41146082 41146082 1 + G A rs146565021 41146081 + 41146061 41146101 41 GCCTGTCGGGGTGTGCAAGGTGGGCCTTTGAGAGGCAGCTC GCCTGTCGGGGTGTGCAAGGTAGGCCTTTGAGAGGCAGCTC < 41bp 0.48043596165176 0.866062041800387 0.24564692 0.5246747 prediction 0.732124083600774 Functional Gain - SPINT1 ENSG00000166145 CDS Human protein_coding chr15:41146081 chr15:41146082 nonsynonymous SNV 0.951 1 22 hPsi_associated_SNPs_19674 0 0 0 0 0 Ribosome 0.438679336993482 0.438718592981084 0.0493494000000001 0 hPsi_site_13398 iPseU_CNN:0.0493494000000001;iRNA_PseU:0 13399 chr1 111861247 111861247 1 + G A UCEC 111861246 + 111861226 111861266 41 ATTGGTGCCCCCACCTCTGGTGCTGGTCCTGCTGGGCCCTA ATTGGTGCCCCCACCTCTGGTACTGGTCCTGCTGGGCCCTA < 41bp 0.484903636386006 0.866043203057022 0.3058288 0.7312654 prediction 0.732086406114043 Functional Gain - CHIA ENSG00000134216 CDS Human protein_coding chr1:111861246 chr1:111861247 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_19675 0 0 0 0 1 exosome 0.438718593000955 0.438718596732011 0.4625308 0 hPsi_site_13399 iPseU_CNN:0.4625308;iRNA_PseU:0 13400 chr12 132512668 132512668 1 + G A COAD 132512667 + 132512647 132512687 41 GCAGAGACTTGCTAAGGATTTGTGCCCTGCCTAGCCATGGA GCAGAGACTTGCTAAGGATTTATGCCCTGCCTAGCCATGGA < 41bp 0.504520210350837 0.870561670226977 0.73372126 0.77055174 prediction 0.73208291975228 Functional Gain - EP400 ENSG00000183495 CDS Human protein_coding chr12:132512667 chr12:132512668 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_19676 0 0 1 0 0 Cytosol 0.438512433970935 0.438717911912979 0.07366096 0 hPsi_site_13400 iPseU_CNN:0.07366096;iRNA_PseU:0 13401 chrX 150912151 150912151 1 + G A HNSC 150912150 + 150912130 150912170 41 CCAGGCTAAGATCGATGCCGTGAAACACTACATGCAGTTCC CCAGGCTAAGATCGATGCCGTAAAACACTACATGCAGTTCC < 41bp 0.513550231019366 0.879588267892465 0.6073891 0.81786335 prediction 0.732076073746197 Functional Gain - CNGA2 ENSG00000183862 CDS Human protein_coding chrX:150912150 chrX:150912151 synonymous SNV . 0 22 hPsi_associated_SNPs_19677 0 0 0 0 0 unknown 0.438718586492268 0.438718673580475 0.4209485 0 hPsi_site_13401 iPseU_CNN:0.4209485;iRNA_PseU:0 13402 chr1 3673343 3673343 1 + G A LUSC 3673342 + 3673322 3673362 41 CATCTGCGAGTTCGATTACTTGCGGAAGAGGAGAAAATCCC CATCTGCGAGTTCGATTACTTACGGAAGAGGAGAAAATCCC < 41bp 0.49518590843409 0.866022393799179 0.22034857 0.6661042 prediction 0.732044787598359 Functional Gain - CCDC27 ENSG00000162592 CDS Human protein_coding chr1:3673342 chr1:3673343 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19678 0 0 0 0 0 exosome 0.438718592993327 0.438718592985314 0.3322084 0 hPsi_site_13402 iPseU_CNN:0.3322084;iRNA_PseU:0 13403 chr19 55815961 55815961 1 + G A SKCM 55815960 + 55815940 55815980 41 CCGGAGCCGGGGGCTGGAGATGAGGCTCGAGGCGGGGGCTC CCGGAGCCGGGGGCTGGAGATAAGGCTCGAGGCGGGGGCTC < 41bp 0.513007313566654 0.879001245845859 0.18208268 0.30064505 prediction 0.731987864558409 Functional Gain - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55815960 chr19:55815961 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_19679 0 0 0 0 0 chromatin 0.438718593085724 0.438718592995102 0 0 hPsi_site_13403 iPseU_CNN:0;iRNA_PseU:0 13404 chr10 101715522 101715522 1 + G A SKCM 101715521 + 101715501 101715541 41 AAGTGGCGTAAAATTTTATCTGGCTCTGTGCCGGGCCCTGC AAGTGGCGTAAAATTTTATCTAGCTCTGTGCCGGGCCCTGC < 41bp 0.49392488672761 0.865982063783355 0.2571136 0.3289077 prediction 0.73196412756671 Functional Gain - DNMBP ENSG00000107554 CDS Human protein_coding chr10:101715521 chr10:101715522 nonsynonymous SNV 0.168 1 22 hPsi_associated_SNPs_19680 0 0 0 0 2 Nucleus 0.438718593673301 0.438718592587711 0 0 hPsi_site_13404 iPseU_CNN:0;iRNA_PseU:0 13405 chr1 17609439 17609439 1 + G A UCEC 17609438 + 17609418 17609458 41 GGAGGAGAAGGTGCGGTCCCTGCTGGAGCCGCTGGGCCTCC GGAGGAGAAGGTGCGGTCCCTACTGGAGCCGCTGGGCCTCC < 41bp 0.498328844849673 0.865974656970878 0.6363152 0.9345705 prediction 0.731949313941757 Functional Gain - PADI3 ENSG00000142619 CDS Human protein_coding chr1:17609438 chr1:17609439 synonymous SNV . 0 22 hPsi_associated_SNPs_19681 0 0 0 0 1 unknown 0.438719552647064 0.438718675840536 0.5965106 0 hPsi_site_13405 iPseU_CNN:0.5965106;iRNA_PseU:0 13406 chr2 27280235 27280235 1 + G A BLCA 27280234 + 27280214 27280254 41 AGCATCCCTGCTGCCTGCCATGACAATGGGCGTGCCAGCCC AGCATCCCTGCTGCCTGCCATAACAATGGGCGTGCCAGCCC < 41bp 0.485141801278494 0.865972675102463 0.20046121 0.24141186 prediction 0.731945350204925 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280234 chr2:27280235 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19682 0 0 1 0 2 Cytosol 0.438715669433059 0.438718573863825 0 0 hPsi_site_13406 iPseU_CNN:0;iRNA_PseU:0 13407 chr11 65620217 65620217 1 + G A STAD 65620216 + 65620196 65620236 41 CGCCGAGAGCCACCAGCAGCTGTGCTGCCAACGCTTCGAGC CGCCGAGAGCCACCAGCAGCTATGCTGCCAACGCTTCGAGC < 41bp 0.490521918072272 0.865958093806493 0.69786 0.87553793 prediction 0.731916187612986 Functional Gain - SNX32 ENSG00000172803 CDS Human protein_coding chr11:65620216 chr11:65620217 synonymous SNV . 0 22 hPsi_associated_SNPs_19683 0 0 0 0 1 nucleoplasm 0.438716565251983 0.438715444384094 0.35535586 0 hPsi_site_13407 iPseU_CNN:0.35535586;iRNA_PseU:0 13408 chr19 14070840 14070840 1 + G A UCEC 14070839 + 14070819 14070859 41 CCTCATCAACATTGGCCTGCTGCTCCTGGCCTTCCCGTCCC CCTCATCAACATTGGCCTGCTACTCCTGGCCTTCCCGTCCC < 41bp 0.485671253854344 0.865952044132584 0.2525378 0.4519585 prediction 0.731904088265169 Functional Gain - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14070839 chr19:14070840 synonymous SNV . 0 22 hPsi_associated_SNPs_19684 0 0 1 7 2 Cytosol 0.438718590491607 0.438718244768888 0 0 hPsi_site_13408 iPseU_CNN:0;iRNA_PseU:0 13409 chr5 148715225 148715225 1 + G A LUSC 148715224 + 148715204 148715244 41 TGTCAACTGTGTTTCTGAGCTGAGGAAGAGGAGCCCATCCA TGTCAACTGTGTTTCTGAGCTAAGGAAGAGGAGCCCATCCA < 41bp 0.488976701144706 0.865951770912598 0.29571378 0.33600807 prediction 0.731903541825196 Functional Gain - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148715224 chr5:148715225 synonymous SNV . 0 22 hPsi_associated_SNPs_19685 0 0 0 0 2 exosome 0.438719050422671 0.438718588595346 0 0 hPsi_site_13409 iPseU_CNN:0;iRNA_PseU:0 13410 chr11 70269080 70269080 1 + G A rs35955195 70269079 + 70269059 70269099 41 ATTCGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGATA ATTCGGCGGGAAGTATGGGGTACAGAAGGATCGGATGGATA < 41bp 0.516616149169143 0.882564679682071 0.34505218 0.6897769 prediction 0.731897061025856 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70269079 chr11:70269080 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19686 0 0 1 0 2 Ribosome 0.438718593131443 0.438718594813906 0.3795538 0 hPsi_site_13410 iPseU_CNN:0.3795538;iRNA_PseU:0 13411 chrX 47100769 47100769 1 + G A OV 47100768 + 47100748 47100788 41 AACCCACTGGGCATGAAGGGTGAGATCGCAGAGGCCTATGC AACCCACTGGGCATGAAGGGTAAGATCGCAGAGGCCTATGC < 41bp 0.482808304209042 0.865948152296649 0.3992548 0.78944105 prediction 0.731896304593298 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47100768 chrX:47100769 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_19687 0 0 1 0 2 cytosol 0.43871859478695 0.438718560872685 0.5788821 0 hPsi_site_13411 iPseU_CNN:0.5788821;iRNA_PseU:0 13412 chr7 4830350 4830350 1 + G A rs185242433 4830349 + 4830329 4830369 41 CGGTGACCTACGATCGGAGGTGCACCGTGGAGCAGATCAAC CGGTGACCTACGATCGGAGGTACACCGTGGAGCAGATCAAC < 41bp 0.493531463443176 0.865937436760276 0.21813959 0.42156002 prediction 0.731874873520552 Functional Gain - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830349 chr7:4830350 nonsynonymous SNV 0.843 3 22 hPsi_associated_SNPs_19688 0 0 1 0 1 chromatin 0.438942219663923 0.438500798814486 0 0 hPsi_site_13412 iPseU_CNN:0;iRNA_PseU:0 13413 chr11 27016346 27016346 1 + G A SKCM 27016345 + 27016325 27016365 41 CACCGTGCTGGGCCGCCAGGTGGAGGATGCTGGGCGCGTGC CACCGTGCTGGGCCGCCAGGTAGAGGATGCTGGGCGCGTGC < 41bp 0.497487505663177 0.865935401282055 0.23715925 0.750273 prediction 0.73187080256411 Functional Gain - FIBIN ENSG00000176971 CDS Human protein_coding chr11:27016345 chr11:27016346 synonymous SNV . 0 22 hPsi_associated_SNPs_19689 0 0 0 0 0 exosome 0.438752338071359 0.438718823422902 0.500546 0 hPsi_site_13413 iPseU_CNN:0.500546;iRNA_PseU:0 13414 chr3 12848908 12848908 1 + G A COAD 12848907 + 12848887 12848927 41 AAGGAGCAGCTGCGAGACATTGCCGGCATTGGCCTCAAGAC AAGGAGCAGCTGCGAGACATTACCGGCATTGGCCTCAAGAC < 41bp 0.507263409239972 0.873183648504218 0.18313086 0.37981564 prediction 0.731840478528493 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12848907 chr3:12848908 nonsynonymous SNV 0.956 1 22 hPsi_associated_SNPs_19690 0 0 0 0 1 chromatin 0.43873637350151 0.439072919045887 0 0 hPsi_site_13414 iPseU_CNN:0;iRNA_PseU:0 13415 chr6 41011375 41011375 1 + G A rs147485285 41011374 + 41011354 41011394 41 CTGCCTCTTGGCCTCTATGCTGTTCAGCTCACCATCAGCTG CTGCCTCTTGGCCTCTATGCTATTCAGCTCACCATCAGCTG < 41bp 0.485344006279032 0.865917974900626 0.31730688 0.6619271 prediction 0.731835949801253 Functional Gain - TSPO2 ENSG00000112212 CDS Human protein_coding chr6:41011374 chr6:41011375 nonsynonymous SNV 0.092 0 22 hPsi_associated_SNPs_19691 0 0 0 0 2 exosome 0.438542087010212 0.440096822288835 0.3238542 0 hPsi_site_13415 iPseU_CNN:0.3238542;iRNA_PseU:0 13416 chr19 45448424 45448424 1 + G A STAD 45448423 + 45448403 45448443 41 GAGCACCTTCCGGGGCTTCATGCAGACCTACTATGACGACC GAGCACCTTCCGGGGCTTCATACAGACCTACTATGACGACC < 41bp 0.504713229860216 0.870612554452829 0.42660213 0.6251005 prediction 0.731798649185226 Functional Gain - APOC4 ENSG00000224916;ENSG00000267467 CDS Human other chr19:45448423 chr19:45448424 nonsynonymous SNV 0.445 0 22 hPsi_associated_SNPs_19692 0 0 0 0 1 Endoplasmic reticulum 0.438672596027472 0.438561311374338 0.250201 0 hPsi_site_13416 iPseU_CNN:0.250201;iRNA_PseU:0 13417 chr9 96408047 96408047 1 + G A HNSC 96408046 + 96408026 96408066 41 GTCCCGGCCCCCACGTTCTATGTCAGTGACGTCGAGAACTA GTCCCGGCCCCCACGTTCTATATCAGTGACGTCGAGAACTA < 41bp 0.482945094559432 0.86589393233317 0.24070206 0.3365565 prediction 0.73178786466634 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96408046 chr9:96408047 nonsynonymous SNV 0.675 1 22 hPsi_associated_SNPs_19693 0 0 0 0 1 chromatin 0.439629648512224 0.438215630925458 0 0 hPsi_site_13417 iPseU_CNN:0;iRNA_PseU:0 13418 chr18 61449751 61449751 1 + G A SKCM 61449750 + 61449730 61449770 41 GTCCGCTTGGGCGCTCAAGATGACTCCCTCTCTCAGATTGA GTCCGCTTGGGCGCTCAAGATAACTCCCTCTCTCAGATTGA < 41bp 0.487622523194095 0.865892371656182 0.19291532 0.3782833 prediction 0.731784743312365 Functional Gain - SERPINB7 ENSG00000166396 CDS Human protein_coding chr18:61449750 chr18:61449751 nonsynonymous SNV 0.091 0 22 hPsi_associated_SNPs_19694 0 0 0 0 1 exosome 0.438718592299281 0.438718592708071 0 0 hPsi_site_13418 iPseU_CNN:0;iRNA_PseU:0 13419 chr7 72413752 72413752 1 + G A SKCM 72413751 + 72413731 72413771 41 GCAGCCACCAGCTCCGGCTTTGGAGCCACCACCCAGACCGC GCAGCCACCAGCTCCGGCTTTAGAGCCACCACCCAGACCGC < 41bp 0.515999859799473 0.881890830339083 0.43167055 0.7960418 prediction 0.731781941079218 Functional Gain - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413751 chr7:72413752 nonsynonymous SNV 0.347 2 22 hPsi_associated_SNPs_19695 0 0 1 0 0 Endoplasmic reticulum 0.438711559513019 0.438733865858648 0.5920836 0 hPsi_site_13419 iPseU_CNN:0.5920836;iRNA_PseU:0 13420 chr1 160784328 160784328 1 + G A HNSC 160784327 + 160784307 160784347 41 CACAGAGAAGGTTGTCTGGTTGTTTAACACATCCATCATTA CACAGAGAAGGTTGTCTGGTTATTTAACACATCCATCATTA < 41bp 0.503575160220597 0.869464148601384 0.34912753 0.68046004 prediction 0.731777976761574 Functional Gain - LY9 ENSG00000122224 CDS Human protein_coding chr1:160784327 chr1:160784328 synonymous SNV . 0 22 hPsi_associated_SNPs_19696 0 0 0 0 0 exosome 0.4325502689182 0.435928012556303 0.36092008 0 hPsi_site_13420 iPseU_CNN:0.36092008;iRNA_PseU:0 13421 chr15 59373338 59373338 1 + G A rs34086812 59373337 + 59373317 59373357 41 ACTCACTTAGCCAGTACAGCTGCACCAATCCCTCAGCATCT ACTCACTTAGCCAGTACAGCTACACCAATCCCTCAGCATCT < 41bp 0.488811132074027 0.865883918312305 0.33829123 0.62517196 prediction 0.731767836624609 Functional Gain - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59373337 chr15:59373338 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_19697 0 0 1 0 0 Ribosome 0.438615890831462 0.438717721067364 0.25034392 0 hPsi_site_13421 iPseU_CNN:0.25034392;iRNA_PseU:0 13422 chr11 67160250 67160250 1 + G A CESC 67160249 + 67160229 67160269 41 GCTGCGCTGTAAGATCCTGATGAAGGTGAGGCCCTTCCCTC GCTGCGCTGTAAGATCCTGATAAAGGTGAGGCCCTTCCCTC < 41bp 0.494159945880542 0.865873294707514 0.31772923 0.6018494 prediction 0.731746589415028 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160249 chr11:67160250 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19698 0 0 1 0 1 nucleus 0.438718487811426 0.438529612860438 0.2036988 0 hPsi_site_13422 iPseU_CNN:0.2036988;iRNA_PseU:0 13423 chr17 6942111 6942111 1 + G A rs33979567 6942110 + 6942090 6942130 41 GGCCCCACTGGCCTTCTCCGTGCTGCCTGAACTAATAGGGA GGCCCCACTGGCCTTCTCCGTACTGCCTGAACTAATAGGGA < 41bp 0.515225578775349 0.88109364597923 0.18565077 0.4589715 prediction 0.731736134407763 Functional Gain - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6942110 chr17:6942111 synonymous SNV . 0 22 hPsi_associated_SNPs_19699 0 0 0 0 1 chromatin 0.438718593022916 0.438718592994925 0 0 hPsi_site_13423 iPseU_CNN:0;iRNA_PseU:0 13424 chr20 17968909 17968909 1 + G A HNSC 17968908 + 17968888 17968928 41 CAAGTTGTGGCATACATGGGTGCCATGAACCATGATACCAA CAAGTTGTGGCATACATGGGTACCATGAACCATGATACCAA < 41bp 0.498157639553702 0.865857674111885 0.19151282 0.3925453 prediction 0.731715348223771 Functional Gain - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17968908 chr20:17968909 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_19700 0 0 1 3 1 chromatin 0.445676526937741 0.438766685215074 0 0 hPsi_site_13424 iPseU_CNN:0;iRNA_PseU:0 13425 chr5 40681465 40681465 1 + G A UCEC 40681464 + 40681444 40681484 41 CGCTACCTGGCCATCAACCATGCCTATTTCTACAGCCACTA CGCTACCTGGCCATCAACCATACCTATTTCTACAGCCACTA < 41bp 0.506184012675566 0.872034636223356 0.3085639 0.659109 prediction 0.731701247095579 Functional Gain - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681464 chr5:40681465 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19701 0 0 0 0 0 Cytosol 0.433758682709582 0.438707125480816 0.318218 0 hPsi_site_13425 iPseU_CNN:0.318218;iRNA_PseU:0 13426 chr10 71129051 71129051 1 + G A UCEC 71129050 + 71129030 71129070 41 CAGTGGGCACCATGATGACCTGTGGCTATGACGACCAGCAC CAGTGGGCACCATGATGACCTATGGCTATGACGACCAGCAC < 41bp 0.519034714910139 0.884850639884513 0.18658233 0.2703818 prediction 0.731631849948748 Functional Gain - HK1 ENSG00000156515 CDS Human protein_coding chr10:71129050 chr10:71129051 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_19702 0 0 1 0 2 chromatin 0.438351652871647 0.440696065657338 0 0 hPsi_site_13426 iPseU_CNN:0;iRNA_PseU:0 13427 chr15 41859713 41859713 1 + G A rs55959964 41859712 + 41859692 41859732 41 CTCTCCCTATGCTGACTGGGTGCCCTTTCAGACCAAGGGTC CTCTCCCTATGCTGACTGGGTACCCTTTCAGACCAAGGGTC < 41bp 0.481515943290046 0.865803904708626 0.23929816 0.5191251 prediction 0.731607809417251 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41859712 chr15:41859713 synonymous SNV . 0 22 hPsi_associated_SNPs_19703 0 0 1 0 1 Ribosome 0.438717665521163 0.438693705755333 0.0382502 0 hPsi_site_13427 iPseU_CNN:0.0382502;iRNA_PseU:0 13428 chr10 75520033 75520033 1 + G A OV 75520032 + 75520012 75520052 41 TCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTCAAGC TCAGTGAGCCAGCCCAACCATATGTCTTCACCTCCTCAAGC < 41bp 0.480860967169814 0.865799253104775 0.38320997 0.5234984 prediction 0.73159850620955 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520032 chr10:75520033 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19704 0 0 0 0 0 Nucleus 0.438758242482247 0.438727705080967 0.0469968000000001 0 hPsi_site_13428 iPseU_CNN:0.0469968000000001;iRNA_PseU:0 13429 chr16 88677874 88677874 1 + G A UCEC 88677873 + 88677853 88677893 41 GAGAAGGACCGGCAGCACCGTGACCGCGACCGGGAGAAGGA GAGAAGGACCGGCAGCACCGTAACCGCGACCGGGAGAAGGA < 41bp 0.480417244978661 0.865794511877678 0.23393291 0.5523659 prediction 0.731589023755356 Functional Gain - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88677873 chr16:88677874 nonsynonymous SNV 0.349 0 22 hPsi_associated_SNPs_19705 0 0 1 0 0 chromatin 0.438718670996667 0.438718494276756 0.1047318 0 hPsi_site_13429 iPseU_CNN:0.1047318;iRNA_PseU:0 13430 chr12 113348980 113348980 1 + G A BLCA 113348979 + 113348959 113348999 41 AGAACTACAGAGAGACTTCCTGAAGCAGCGCCCCACCAAGC AGAACTACAGAGAGACTTCCTAAAGCAGCGCCCCACCAAGC < 41bp 0.472249735743441 0.865790600535307 0.19846493 0.25192553 prediction 0.731581201070615 Functional Gain - OAS1 ENSG00000089127 CDS Human protein_coding chr12:113348979 chr12:113348980 synonymous SNV . 0 22 hPsi_associated_SNPs_19706 0 0 0 0 2 Ribosome 0.438718592746428 0.438718574480043 0 0 hPsi_site_13430 iPseU_CNN:0;iRNA_PseU:0 13431 chr2 113832841 113832841 1 + G A SKCM 113832840 + 113832820 113832860 41 AGGCTGCTGCCTGGCCTGGCTGGTTCCTGTGTGGCCCGGCA AGGCTGCTGCCTGGCCTGGCTAGTTCCTGTGTGGCCCGGCA < 41bp 0.505328138163286 0.871116241404862 0.21951026 0.47576678 prediction 0.731576206483153 Functional Gain - IL1F10 ENSG00000136697 CDS Human protein_coding chr2:113832840 chr2:113832841 stopgain 1.000 1 22 hPsi_associated_SNPs_19707 0 0 0 0 0 unknown 0.438718596968977 0.438718592891152 0 0 hPsi_site_13431 iPseU_CNN:0;iRNA_PseU:0 13432 chr2 96992826 96992826 1 + G A LIHC 96992825 + 96992805 96992845 41 GAGGAAGTCCGTGTTGTCCCTGTCACCTCTTACAACTGGCT GAGGAAGTCCGTGTTGTCCCTATCACCTCTTACAACTGGCT < 41bp 0.502865232840949 0.868649354353122 0.31993824 0.427391 prediction 0.731568243024347 Functional Gain - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96992825 chr2:96992826 nonsynonymous SNV 0.449 0 22 hPsi_associated_SNPs_19708 0 0 1 0 0 Endoplasmic reticulum 0.438718592995128 0.438718592995096 0 0 hPsi_site_13432 iPseU_CNN:0;iRNA_PseU:0 13433 chr1 3679950 3679950 1 + G A STAD 3679949 + 3679929 3679969 41 CGAGTCGTTTGAGGAGGAGCTGCTGGCCCAGCTGGAGGAGT CGAGTCGTTTGAGGAGGAGCTACTGGCCCAGCTGGAGGAGT < 41bp 0.492406734314005 0.865784117381603 0.25911003 0.709238 prediction 0.731568234763206 Functional Gain - CCDC27 ENSG00000162592 CDS Human protein_coding chr1:3679949 chr1:3679950 synonymous SNV . 0 22 hPsi_associated_SNPs_19709 0 0 0 0 1 exosome 0.438719003495745 0.438727199567473 0.418476 0 hPsi_site_13433 iPseU_CNN:0.418476;iRNA_PseU:0 13434 chr19 52719809 52719809 1 + G A SARC 52719808 + 52719788 52719828 41 GTGTCCGATGCCAACCAACATGTCAAGTCTGCCCTGGCCTC GTGTCCGATGCCAACCAACATATCAAGTCTGCCCTGGCCTC < 41bp 0.518127213055828 0.88390653418462 0.2717491 0.32134503 prediction 0.731558642257584 Functional Gain - PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52719808 chr19:52719809 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19710 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_13434 iPseU_CNN:0;iRNA_PseU:0 13435 chr1 43663253 43663253 1 + G A SKCM 43663252 + 43663232 43663272 41 TGCTCACTTTGAGTATTTGATGTATCCATTGCACTCAGCAC TGCTCACTTTGAGTATTTGATATATCCATTGCACTCAGCAC < 41bp 0.499767599033148 0.865745293094823 0.20992291 0.337848 prediction 0.731490586189647 Functional Gain - CFAP57 ENSG00000243710 CDS Human protein_coding chr1:43663252 chr1:43663253 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_19711 0 0 0 0 1 exosome 0.438787307194967 0.438672121647534 0 0 hPsi_site_13435 iPseU_CNN:0;iRNA_PseU:0 13436 chrX 151092681 151092681 1 + G A COAD 151092680 + 151092660 151092700 41 ACACCTACACCCTTGTCACCTGCCTGGGCCTTTCCTATGAT ACACCTACACCCTTGTCACCTACCTGGGCCTTTCCTATGAT < 41bp 0.495154791047815 0.86571479937386 0.20277128 0.3137775 prediction 0.731429598747721 Functional Gain - MAGEA4 ENSG00000147381 CDS Human protein_coding chrX:151092680 chrX:151092681 nonsynonymous SNV 0.062 3 22 hPsi_associated_SNPs_19712 0 0 0 0 0 unknown 0.438718592953668 0.438718595397463 0 0 hPsi_site_13436 iPseU_CNN:0;iRNA_PseU:0 13437 chr3 14939498 14939498 1 + G A SKCM 14939497 + 14939477 14939517 41 CTGGCCCGGGAGCAGGGGTTTGATCACCACGCCACTCACAT CTGGCCCGGGAGCAGGGGTTTAATCACCACGCCACTCACAT < 41bp 0.477704122617512 0.865709080864628 0.31623912 0.88717806 prediction 0.731418161729255 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14939497 chr3:14939498 nonsynonymous SNV 0.891 0 22 hPsi_associated_SNPs_19713 0 0 0 0 1 Cytosol 0.438703103944093 0.43874286549724 0.77435612 0 hPsi_site_13437 iPseU_CNN:0.77435612;iRNA_PseU:0 13438 chr15 32460263 32460263 1 + G A BLCA 32460262 + 32460242 32460282 41 CAGCCTGGCCAGTGTGGAGATGAGCGCCGTGGCGCCGCCGC CAGCCTGGCCAGTGTGGAGATAAGCGCCGTGGCGCCGCCGC < 41bp 0.499719987020941 0.865693154130669 0.462464 0.76141775 prediction 0.731386308261339 Functional Gain - CHRNA7 ENSG00000175344 CDS Human protein_coding chr15:32460262 chr15:32460263 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_19714 0 0 0 0 0 Nucleus 0.438723105182841 0.438417993949517 0.5228355 0 hPsi_site_13438 iPseU_CNN:0.5228355;iRNA_PseU:0 13439 chr4 148944547 148944547 1 + G A SKCM 148944546 + 148944526 148944566 41 CCGTGGCCGTCTACAATCTTTGTCTGGAGCTGGAAGATGGT CCGTGGCCGTCTACAATCTTTATCTGGAGCTGGAAGATGGT < 41bp 0.500489232100938 0.866182238365617 0.2793017 0.4028647 prediction 0.731386012529358 Functional Gain - ARHGAP10 ENSG00000071205 CDS Human protein_coding chr4:148944546 chr4:148944547 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19715 0 0 0 0 1 Nucleus 0.438718567150986 0.438718605244008 0 0 hPsi_site_13439 iPseU_CNN:0;iRNA_PseU:0 13440 chr19 2098087 2098087 1 + G A PAAD 2098086 + 2098066 2098106 41 AGACCATCTCCTGCAACAACTGCACAGACTCGCACGTCGCC AGACCATCTCCTGCAACAACTACACAGACTCGCACGTCGCC < 41bp 0.514678366375176 0.880360325688106 0.18324634 0.3927286 prediction 0.73136391862586 Functional Gain - IZUMO4 ENSG00000099840 CDS Human protein_coding chr19:2098086 chr19:2098087 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_19716 0 0 1 0 2 Cytosol 0.438791389025197 0.439230550386346 0 0 hPsi_site_13440 iPseU_CNN:0;iRNA_PseU:0 13441 chr14 74823825 74823825 1 + G A OV 74823824 + 74823804 74823844 41 CCGCACCGTGGTAGAGATGCTGCTGCACAGACACTACTACC CCGCACCGTGGTAGAGATGCTACTGCACAGACACTACTACC < 41bp 0.51040501888593 0.876075772550045 0.21623272 0.31898707 prediction 0.731341507328231 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74823824 chr14:74823825 synonymous SNV . 0 22 hPsi_associated_SNPs_19717 0 0 0 0 0 unknown 0.442782643526131 0.438798533727883 0 0 hPsi_site_13441 iPseU_CNN:0;iRNA_PseU:0 13442 chr3 45049009 45049009 1 + G A rs145100368 45049008 + 45048988 45049028 41 CCAGCAAGGGAGTTGTGACGTGCATGAGGAAAGTGGGGAAG CCAGCAAGGGAGTTGTGACGTACATGAGGAAAGTGGGGAAG < 41bp 0.514816065240477 0.880483948307571 0.22356269 0.51474434 prediction 0.731335766134187 Functional Gain - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45049008 chr3:45049009 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_19718 0 0 1 0 2 Ribosome 0.438718592995102 0.438718588908245 0.02948868 0 hPsi_site_13442 iPseU_CNN:0.02948868;iRNA_PseU:0 13443 chr1 156880473 156880473 1 + G A UCEC 156880472 + 156880452 156880492 41 AGTGCGCTAACCACTCCTTCTGCCACCCCTCGAACGGGACC AGTGCGCTAACCACTCCTTCTACCACCCCTCGAACGGGACC < 41bp 0.514631224042912 0.880276047440768 0.3484732 0.7877166 prediction 0.73128964679571 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156880472 chr1:156880473 nonsynonymous SNV 0.234 5 22 hPsi_associated_SNPs_19719 0 0 0 0 1 cytosol 0.438718596598215 0.438718600039758 0.5754332 0 hPsi_site_13443 iPseU_CNN:0.5754332;iRNA_PseU:0 13444 chr1 227153401 227153401 1 + G A rs115855910 227153400 + 227153380 227153420 41 GCATGCCCGGGAGCGGAAGGTGCCTGTGACGAGGATTGGCC GCATGCCCGGGAGCGGAAGGTACCTGTGACGAGGATTGGCC < 41bp 0.487112400936183 0.865632691837713 0.30252564 0.8709067 prediction 0.731265383675425 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227153400 chr1:227153401 synonymous SNV . 0 22 hPsi_associated_SNPs_19720 1 0 1 0 1 Nucleus 0.438718593146816 0.438718678238239 0.7418134 0 hPsi_site_13444 iPseU_CNN:0.7418134;iRNA_PseU:0 13445 chr5 135389735 135389735 1 + G A THCA 135389734 + 135389714 135389754 41 TCTCTCTGGAAGTGAGCGGTTGACCCTCCTGGCTCCCCTGA TCTCTCTGGAAGTGAGCGGTTAACCCTCCTGGCTCCCCTGA < 41bp 0.480122046821859 0.865621731668541 0.6236946 0.9089886 prediction 0.731243463337081 Functional Gain - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135389734 chr5:135389735 synonymous SNV . 0 22 hPsi_associated_SNPs_19721 0 0 1 0 1 Endoplasmic reticulum 0.438124055229057 0.438548759930786 0.570588 0 hPsi_site_13445 iPseU_CNN:0.570588;iRNA_PseU:0 13446 chr1 93300417 93300417 1 + G A SKCM 93300416 + 93300396 93300436 41 CCAAAATATGGTGTGAAGGTTGGCCTGACAAATTATGCTGC CCAAAATATGGTGTGAAGGTTAGCCTGACAAATTATGCTGC < 41bp 0.495634384112114 0.865602523857411 0.3151187 0.6140759 prediction 0.731205047714821 Functional Gain - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300416 chr1:93300417 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19722 0 0 1 2 1 Cytosol 0.438718609653665 0.438718318785725 0.2281518 0 hPsi_site_13446 iPseU_CNN:0.2281518;iRNA_PseU:0 13447 chr14 94394723 94394723 1 + G A UCEC 94394722 + 94394702 94394742 41 CCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTGGACCAT CCCTGGATAAGTCCGCACCCTACCGCCGCTCCGTGGACCAT < 41bp 0.504033531911055 0.869623742416684 0.24251571 0.6951224 prediction 0.731180421011259 Functional Gain - FAM181A ENSG00000140067 CDS Human protein_coding chr14:94394722 chr14:94394723 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_19723 0 0 0 0 0 exosome 0.438718593040741 0.438718150363857 0.3902448 0 hPsi_site_13447 iPseU_CNN:0.3902448;iRNA_PseU:0 13448 chr1 227947044 227947044 1 + G A BLCA 227947043 + 227947023 227947063 41 GCCAGACATGGCCTATCGTTTGATATCTGCCAAGATGCCAG GCCAGACATGGCCTATCGTTTAATATCTGCCAAGATGCCAG < 41bp 0.486755489457937 0.865579860917342 0.30017367 0.5034 prediction 0.731159721834684 Functional Gain - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227947043 chr1:227947044 synonymous SNV . 0 22 hPsi_associated_SNPs_19724 0 0 1 0 0 Ribosome 0.438597914894714 0.438718640695569 0.00679999999999992 0 hPsi_site_13448 iPseU_CNN:0.00679999999999992;iRNA_PseU:0 13449 chr10 12136089 12136089 1 + G A LUAD 12136088 + 12136068 12136108 41 TCAGGGAAGCTTGTGGGCTGTGCCATCATCCATGTCAATGG TCAGGGAAGCTTGTGGGCTGTACCATCATCCATGTCAATGG < 41bp 0.476552108083252 0.865544877315857 0.29771876 0.5684516 prediction 0.731089754631714 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12136088 chr10:12136089 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19725 0 0 1 0 1 Endoplasmic reticulum 0.438719272622727 0.438717970336835 0.1369032 0 hPsi_site_13449 iPseU_CNN:0.1369032;iRNA_PseU:0 13450 chr12 58015100 58015100 1 + G A UCEC 58015099 + 58015079 58015119 41 TCCACCTTTTTGTCCGAGCCTGTGGTCAAGGCGCTGACCAG TCCACCTTTTTGTCCGAGCCTATGGTCAAGGCGCTGACCAG < 41bp 0.514670203399198 0.880208588437194 0.22318822 0.28163236 prediction 0.731076770075991 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58015099 chr12:58015100 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_19726 0 0 0 0 1 chromatin 0.438719015796924 0.438718583408631 0 0 hPsi_site_13450 iPseU_CNN:0;iRNA_PseU:0 13451 chr3 52836730 52836730 1 + G A SKCM 52836729 + 52836709 52836749 41 GGAGGTGGACATGAAGGAGATGGAGAAGGCCCTGCAGGAGC GGAGGTGGACATGAAGGAGATAGAGAAGGCCCTGCAGGAGC < 41bp 0.478237448830082 0.865537198645944 0.28790367 0.39633703 prediction 0.731074397291889 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836729 chr3:52836730 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_19727 0 0 1 0 2 cytosol 0.438718592995102 0.438718512222496 0 0 hPsi_site_13451 iPseU_CNN:0;iRNA_PseU:0 13452 chr15 42103096 42103096 1 + G A COAD 42103095 + 42103075 42103115 41 CCTCAGGTGTGTGGTTGTGTTGTTCAATCCCCGGAAACACA CCTCAGGTGTGTGGTTGTGTTATTCAATCCCCGGAAACACA < 41bp 0.500148992583677 0.865663965247041 0.4685396 0.7506959 prediction 0.731029945326727 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42103095 chr15:42103096 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_19728 0 0 1 0 2 Endoplasmic reticulum 0.438723095947482 0.438719342851239 0.5013918 0 hPsi_site_13452 iPseU_CNN:0.5013918;iRNA_PseU:0 13453 chr10 5144779 5144779 1 + G A rs549271166 5144778 + 5144758 5144798 41 GATTGCCCTGCGCTACCAGCTGCAGCGTGGGGTTGTGGTCC GATTGCCCTGCGCTACCAGCTACAGCGTGGGGTTGTGGTCC < 41bp 0.475287676036646 0.865512068686403 0.4085608 0.6508701 prediction 0.731024137372805 Functional Gain - AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5144778 chr10:5144779 synonymous SNV . 0 22 hPsi_associated_SNPs_19729 0 0 0 0 1 Ribosome 0.438761241699229 0.438690521720688 0.3017402 0 hPsi_site_13453 iPseU_CNN:0.3017402;iRNA_PseU:0 13454 chr8 22107971 22107971 1 + G A rs144849715 22107970 + 22107950 22107990 41 GATGACAGTCCTGGGACACGTGAAGCACAAACTTGTATGTT GATGACAGTCCTGGGACACGTAAAGCACAAACTTGTATGTT < 41bp 0.494712212899575 0.865499001228189 0.66483074 0.8737748 prediction 0.730998002456379 Functional Gain - POLR3D ENSG00000168495 CDS Human protein_coding chr8:22107970 chr8:22107971 synonymous SNV . 0 22 hPsi_associated_SNPs_19730 0 0 1 3 1 Ribosome 0.438719541306237 0.438724429151449 0.41788812 0 hPsi_site_13454 iPseU_CNN:0.41788812;iRNA_PseU:0 13455 chr17 30648189 30648189 1 + G A UCEC 30648188 + 30648168 30648208 41 ACCGTCTTCGTGCTGTTCGCTGTCTTCTGGAACATCTTTGC ACCGTCTTCGTGCTGTTCGCTATCTTCTGGAACATCTTTGC < 41bp 0.507877271535228 0.873346404296235 0.7046263 0.9134727 prediction 0.730938265522015 Functional Gain - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30648188 chr17:30648189 nonsynonymous SNV 0.835 0 22 hPsi_associated_SNPs_19731 0 0 0 0 0 cytosol 0.438756686628084 0.438917080765576 0.4176928 0 hPsi_site_13455 iPseU_CNN:0.4176928;iRNA_PseU:0 13456 chr3 183465483 183465483 1 + G A rs75535501 183465482 + 183465462 183465502 41 GGATAGAACTTATACTGGCTTGCAGACTCTTGGAGCAGAGA GGATAGAACTTATACTGGCTTACAGACTCTTGGAGCAGAGA < 41bp 0.504785117708908 0.870240560476123 0.26377213 0.29144472 prediction 0.730910885534429 Functional Gain - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183465482 chr3:183465483 synonymous SNV . 0 22 hPsi_associated_SNPs_19732 0 0 1 0 2 Nucleus 0.438718579139182 0.438734351542059 0 0 hPsi_site_13456 iPseU_CNN:0;iRNA_PseU:0 13457 chr11 290888 290888 1 + G A rs150075556 290887 + 290867 290907 41 GCTGCAGGCCAGGGGAGCTCTGTATACGGCTCACGCACAGG GCTGCAGGCCAGGGGAGCTCTATATACGGCTCACGCACAGG < 41bp 0.515918758055811 0.881370928931646 0.4264569 0.47029984 prediction 0.730904341751669 Functional Gain - PGGHG ENSG00000142102 CDS Human protein_coding chr11:290887 chr11:290888 synonymous SNV . 0 22 hPsi_associated_SNPs_19733 0 0 0 0 0 unknown 0.438461324099509 0.438713018729912 0 0 hPsi_site_13457 iPseU_CNN:0;iRNA_PseU:0 13458 chrX 70444088 70444088 1 + G A THYM 70444087 + 70444067 70444107 41 CTACCCCTGCCCCAACACAGTGGACTGCTTCGTGTCCCGCC CTACCCCTGCCCCAACACAGTAGACTGCTTCGTGTCCCGCC < 41bp 0.477110205370705 0.865443044876807 0.2910766 0.46751973 prediction 0.730886089753613 Functional Gain - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444087 chrX:70444088 synonymous SNV . 0 22 hPsi_associated_SNPs_19734 0 0 1 0 0 Endoplasmic reticulum 0.438692217493271 0.438719694887661 0 0 hPsi_site_13458 iPseU_CNN:0;iRNA_PseU:0 13459 chr7 158719106 158719106 1 + G A rs61747095 158719105 + 158719085 158719125 41 TTCATCAGAAATGTCAGGTTTGTCCTTCCACATCGCTTCCT TTCATCAGAAATGTCAGGTTTATCCTTCCACATCGCTTCCT < 41bp 0.490966294763109 0.865439063818715 0.40366215 0.62396264 prediction 0.73087812763743 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158719105 chr7:158719106 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19735 0 0 1 1 2 Nucleus 0.438718618965813 0.438720404037734 0.24792528 0 hPsi_site_13459 iPseU_CNN:0.24792528;iRNA_PseU:0 13460 chr19 41313073 41313073 1 + G A BLCA 41313072 + 41313052 41313092 41 GGCCTGCTGCAGATCTTCCCTGAGGGCCGGCCCGTGGTAGC GGCCTGCTGCAGATCTTCCCTAAGGGCCGGCCCGTGGTAGC < 41bp 0.48138523199862 0.865432440771234 0.34469402 0.45474702 prediction 0.730864881542467 Functional Gain - EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41313072 chr19:41313073 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_19736 0 0 1 0 1 chromatin 0.43871859299361 0.438718592974052 0 0 hPsi_site_13460 iPseU_CNN:0;iRNA_PseU:0 13461 chr1 27720803 27720803 1 + G A SKCM 27720802 + 27720782 27720822 41 GTGGGGAGGTGCCCTGGGCCTGGGGCTGCTGCCTGTGCTGG GTGGGGAGGTGCCCTGGGCCTAGGGCTGCTGCCTGTGCTGG < 41bp 0.485487459407247 0.865404641311531 0.22722915 0.4797341 prediction 0.730809282623063 Functional Gain - GPR3 ENSG00000181773 CDS Human protein_coding chr1:27720802 chr1:27720803 synonymous SNV . 0 22 hPsi_associated_SNPs_19737 0 0 1 0 0 nucleoplasm 0.438718592994112 0.438952677952925 0 0 hPsi_site_13461 iPseU_CNN:0;iRNA_PseU:0 13462 chr11 119045756 119045756 1 + G A STAD 119045755 + 119045735 119045775 41 AGGTTTTTCCTGGCCCCATGTGTGGAGCCAGGGCGTGCAGG AGGTTTTTCCTGGCCCCATGTATGGAGCCAGGGCGTGCAGG < 41bp 0.507713283798986 0.873116759178751 0.2372446 0.2874371 prediction 0.73080695075953 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119045755 chr11:119045756 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19738 0 0 1 0 0 exosome 0.438718592960506 0.438718593006811 0 0 hPsi_site_13462 iPseU_CNN:0;iRNA_PseU:0 13463 chr17 38249337 38249337 1 + C T CESC 38249338 - 38249318 38249358 41 CCTTCCGGGTGGACGCCCAGTGACCCGCCCGGCCGGCCTTC CCTTCCGGGTGGACGCCCAGTAACCCGCCCGGCCGGCCTTC < 41bp 0.497979978291908 0.865399513279782 0.19492766 0.37775248 prediction 0.730799026559565 Functional Gain - NR1D1;THRA ENSG00000126351;ENSG00000126368 CDS Human other chr17:38249338 chr17:38249337 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19739 0 0 1 0 0 unknown 0.438718592834762 0.438718592994775 0 0 hPsi_site_13463 iPseU_CNN:0;iRNA_PseU:0 13464 chrX 67939146 67939146 1 + G A STAD 67939145 + 67939125 67939165 41 CTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCT CTGGAGATCAACCGGCAGTTTACAGGCCAGATCAACCTCCT < 41bp 0.519150951036841 0.884550079388262 0.283959 0.6986778 prediction 0.730798256702843 Functional Gain - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67939145 chrX:67939146 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19740 0 0 0 0 2 chromatin 0.438717611462107 0.438624045838117 0.3973556 0 hPsi_site_13464 iPseU_CNN:0.3973556;iRNA_PseU:0 13465 chr17 38172833 38172833 1 + G A BLCA 38172832 + 38172812 38172852 41 CCCCGAGTTGGGTCCCACCTTGGACACACTGCAGCTGGACG CCCCGAGTTGGGTCCCACCTTAGACACACTGCAGCTGGACG < 41bp 0.484269053737123 0.86539690125848 0.45071238 0.8764876 prediction 0.73079380251696 Functional Gain - CSF3 ENSG00000108342 CDS Human protein_coding chr17:38172832 chr17:38172833 synonymous SNV . 0 22 hPsi_associated_SNPs_19741 0 0 0 0 2 exosome 0.438727167511815 0.438750654696344 0.7529752 0 hPsi_site_13465 iPseU_CNN:0.7529752;iRNA_PseU:0 13466 chr5 177548645 177548645 1 + G A UCEC 177548644 + 177548624 177548664 41 GGTCCGGCTGCGCGAGGCTGTGCGCAGCCTGCAGGAGCAGG GGTCCGGCTGCGCGAGGCTGTACGCAGCCTGCAGGAGCAGG < 41bp 0.504807319670327 0.870187024450367 0.27244925 0.7727774 prediction 0.73075940956008 Functional Gain - N4BP3 ENSG00000145911 CDS Human protein_coding chr5:177548644 chr5:177548645 synonymous SNV . 0 22 hPsi_associated_SNPs_19742 0 0 0 0 0 chromatin 0.438719487141917 0.438718569570038 0.5455548 0 hPsi_site_13466 iPseU_CNN:0.5455548;iRNA_PseU:0 13467 chr20 6759483 6759483 1 + G A SKCM 6759482 + 6759462 6759502 41 GTGACGTGGGGTGGAATGACTGGATTGTGGCTCCCCCGGGG GTGACGTGGGGTGGAATGACTAGATTGTGGCTCCCCCGGGG < 41bp 0.505437710612133 0.870798733167555 0.30161646 0.62462735 prediction 0.730722045110845 Functional Gain - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6759482 chr20:6759483 stopgain 0.998 1 22 hPsi_associated_SNPs_19743 0 0 1 0 0 Ribosome 0.438972786987009 0.438718530416851 0.2492547 0 hPsi_site_13467 iPseU_CNN:0.2492547;iRNA_PseU:0 13468 chr13 113773089 113773089 1 + G A STAD 113773088 + 113773068 113773108 41 ATCACGGAGTACATGTTCTGTGCCGGCTACTCGGATGGCAG ATCACGGAGTACATGTTCTGTACCGGCTACTCGGATGGCAG < 41bp 0.51185490135828 0.877202741236683 0.31832454 0.7594203 prediction 0.730695679756807 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113773088 chr13:113773089 nonsynonymous SNV 0.297 5 22 hPsi_associated_SNPs_19744 0 0 1 0 0 insoluble cytoplasm 0.440990651155376 0.438994431081137 0.5188406 0 hPsi_site_13468 iPseU_CNN:0.5188406;iRNA_PseU:0 13469 chr8 144733000 144733000 1 + G A SKCM 144732999 + 144732979 144733019 41 CACACCGGAGAGAGACCCTTTGAATGCAATGAGTGTGGGAA CACACCGGAGAGAGACCCTTTAAATGCAATGAGTGTGGGAA < 41bp 0.508200619430071 0.873548092839097 0.17258653 0.26175272 prediction 0.730694946818052 Functional Gain - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732999 chr8:144733000 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_19745 0 0 1 0 0 cytosol 0.438718675916848 0.438710076297351 0 0 hPsi_site_13469 iPseU_CNN:0;iRNA_PseU:0 13470 chr20 31427576 31427576 1 + G A rs374092179 31427575 + 31427555 31427595 41 ATCTCAACACAGAGAACCGCTGCGGCTCCTAAGGCTGGCCC ATCTCAACACAGAGAACCGCTACGGCTCCTAAGGCTGGCCC < 41bp 0.478331219697536 0.865344121548773 0.2214078 0.3631146 prediction 0.730688243097545 Functional Gain - MAPRE1 ENSG00000101367 CDS Human protein_coding chr20:31427575 chr20:31427576 nonsynonymous SNV 0.787 0 22 hPsi_associated_SNPs_19746 0 0 1 0 2 Cytosol 0.438718749126978 0.43871859020856 0 0 hPsi_site_13470 iPseU_CNN:0;iRNA_PseU:0 13471 chr14 24884937 24884937 1 + G A SKCM 24884936 + 24884916 24884956 41 GATGAGTGGTGTGCTGGCTTTGGTCTCTATGTTCTATCGCC GATGAGTGGTGTGCTGGCTTTAGTCTCTATGTTCTATCGCC < 41bp 0.489138860178572 0.865340357942059 0.40069562 0.81046414 prediction 0.730680715884117 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884936 chr14:24884937 nonsynonymous SNV 0.969 3 22 hPsi_associated_SNPs_19747 0 0 1 0 0 Exosome 0.438716625787012 0.438720658867258 0.62092828 0 hPsi_site_13471 iPseU_CNN:0.62092828;iRNA_PseU:0 13472 chr9 119461275 119461275 1 + G A rs1661300 119461274 + 119461254 119461294 41 CAGTGGCATTGATAGCTTTGTGCTAAGCTTCCTTGGGGCAG CAGTGGCATTGATAGCTTTGTACTAAGCTTCCTTGGGGCAG < 41bp 0.494242861831409 0.865338405978468 0.21260062 0.6849705 prediction 0.730676811956936 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461274 chr9:119461275 synonymous SNV . 0 22 hPsi_associated_SNPs_19748 3 0 1 0 0 chromatin 0.438728483920496 0.438719639263145 0.369941 0 hPsi_site_13472 iPseU_CNN:0.369941;iRNA_PseU:0 13473 chr17 30791556 30791556 1 + G A OV 30791555 + 30791535 30791575 41 CTAGGCAAGACTGGTGTCTTTGTACTTTGATACCAAGAGGT CTAGGCAAGACTGGTGTCTTTATACTTTGATACCAAGAGGT < 41bp 0.512632567130704 0.877960628114771 0.2879414 0.26688394 prediction 0.730656121968134 Functional Gain - PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30791555 chr17:30791556 synonymous SNV . 0 22 hPsi_associated_SNPs_19749 0 0 1 0 2 Ribosome 0.437823902308564 0.4386086034876 0 0 hPsi_site_13473 iPseU_CNN:0;iRNA_PseU:0 Multiple complex diseases 13474 chr12 57167811 57167811 1 + G A ACC 57167810 + 57167790 57167830 41 CGAGGCTTGAGAGTGCTGGCTGCGTGTCTGACGGAGAAGGG CGAGGCTTGAGAGTGCTGGCTACGTGTCTGACGGAGAAGGG < 41bp 0.484959665521003 0.865317328762819 0.23668584 0.5042326 prediction 0.730634657525639 Functional Gain - HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57167810 chr12:57167811 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_19750 0 0 0 0 0 Endoplasmic reticulum 0.446290830012177 0.450977508379559 0.00846520000000006 0 hPsi_site_13474 iPseU_CNN:0.00846520000000006;iRNA_PseU:0 13475 chr10 17275589 17275589 1 + G A COAD 17275588 + 17275568 17275608 41 TTTCTCTGTTCAAAATAGGATGTTGACAATGCGTCTCTGGC TTTCTCTGTTCAAAATAGGATATTGACAATGCGTCTCTGGC < 41bp 0.507778266988831 0.873088874512226 0.34780303 0.5671838 prediction 0.73062121504679 Functional Gain - VIM ENSG00000026025 CDS Human protein_coding chr10:17275588 chr10:17275589 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19751 0 0 1 2 2 Ribosome 0.438012068727792 0.438334232208967 0.1343676 0 hPsi_site_13475 iPseU_CNN:0.1343676;iRNA_PseU:0 13476 chr19 50926265 50926265 1 + G A rs11546996 50926264 + 50926244 50926284 41 GCCCCGGGGCCTGGCCTCCCTGCATACCCCACGGAGAACTT GCCCCGGGGCCTGGCCTCCCTACATACCCCACGGAGAACTT < 41bp 0.484921616543559 0.865310319655492 0.4473803 0.7754354 prediction 0.730620639310983 Functional Gain - SPIB ENSG00000142539;ENSG00000269404 CDS Human other chr19:50926264 chr19:50926265 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_19752 0 0 0 0 1 Endoplasmic reticulum 0.438541091814958 0.443037184448863 0.5508708 0 hPsi_site_13476 iPseU_CNN:0.5508708;iRNA_PseU:0 13477 chr4 159601699 159601699 1 + G A UCEC 159601698 + 159601678 159601718 41 AGATGGTCTTCAACTTCTACTGTGCCTCGAATTACTACCCA AGATGGTCTTCAACTTCTACTATGCCTCGAATTACTACCCA < 41bp 0.497287019643684 0.86530749852868 0.25284934 0.34698036 prediction 0.730614997057359 Functional Gain - ETFDH ENSG00000171503 CDS Human protein_coding chr4:159601698 chr4:159601699 nonsynonymous SNV 0.219 2 22 hPsi_associated_SNPs_19753 0 0 1 0 2 Ribosome 0.438676209277739 0.438624441418897 0 0 hPsi_site_13477 iPseU_CNN:0;iRNA_PseU:0 13478 chr1 1455970 1455970 1 + G A UCEC 1455969 + 1455949 1455989 41 GGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAGTGA GGAAGGATTCCGTGCCTTTGTAACAGACTGGGACAAAGTGA < 41bp 0.494474816474677 0.865305837463303 0.20333171 0.31071 prediction 0.730611674926605 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1455969 chr1:1455970 synonymous SNV . 0 22 hPsi_associated_SNPs_19754 0 0 1 0 2 Ribosome 0.438718597418285 0.438718593142582 0 0 hPsi_site_13478 iPseU_CNN:0;iRNA_PseU:0 13479 chr16 71570688 71570688 1 + G A LGG 71570687 + 71570667 71570707 41 CAACATCAGCTCCCTGTCTATGAAGGCACAGCCCGAGCGCA CAACATCAGCTCCCTGTCTATAAAGGCACAGCCCGAGCGCA < 41bp 0.49586448205449 0.865303482128465 0.20269608 0.30836886 prediction 0.73060696425693 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71570687 chr16:71570688 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_19755 0 0 0 0 0 exosome 0.438717768060192 0.438717000242473 0 0 hPsi_site_13479 iPseU_CNN:0;iRNA_PseU:0 13480 chr12 112572608 112572608 1 + G A LGG 112572607 + 112572587 112572627 41 CTGTCAAAGGAACATTGGTATGTGTCCTACCTGTAAGGAAC CTGTCAAAGGAACATTGGTATATGTCCTACCTGTAAGGAAC < 41bp 0.506859128084181 0.872148713959837 0.5592498 0.65185857 prediction 0.730579171751312 Functional Gain - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112572607 chr12:112572608 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_19756 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0.18521754 0 hPsi_site_13480 iPseU_CNN:0.18521754;iRNA_PseU:0 13481 chr20 44512534 44512534 1 + G A BLCA 44512533 + 44512513 44512553 41 ATCCTGGGCAGCAAGTGGAGTGAGACCCTGGATAAGCACCT ATCCTGGGCAGCAAGTGGAGTAAGACCCTGGATAAGCACCT < 41bp 0.490594499377178 0.865269889744634 0.65491587 0.7749294 prediction 0.730539779489268 Functional Gain - ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44512533 chr20:44512534 nonsynonymous SNV 0.957 0 22 hPsi_associated_SNPs_19757 0 0 1 0 0 nucleus 0.438718588441666 0.438718593680834 0.24002706 0 hPsi_site_13481 iPseU_CNN:0.24002706;iRNA_PseU:0 13482 chr16 90001759 90001759 1 + G A BLCA 90001758 + 90001738 90001778 41 GTTCGATGCCAAGAACATGATGGCCGCCTGCGACCCGCGCC GTTCGATGCCAAGAACATGATAGCCGCCTGCGACCCGCGCC < 41bp 0.515001027949343 0.880265539356539 0.31411746 0.7063941 prediction 0.730529022814391 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001758 chr16:90001759 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_19758 0 0 1 0 0 chromatin 0.43888657186055 0.44168265142829 0.4127882 0 hPsi_site_13482 iPseU_CNN:0.4127882;iRNA_PseU:0 13483 chr15 37002110 37002110 1 + G A CESC 37002109 + 37002089 37002129 41 AGCAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTA AGCAAAGCCTCATTTGGTGATAAATGTAGCCACCACGCCTA < 41bp 0.49161495158077 0.865228975391831 0.18613955 0.32725263 prediction 0.730457950783662 Functional Gain - C15orf41 ENSG00000186073 CDS Human protein_coding chr15:37002109 chr15:37002110 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19759 0 0 0 0 2 Cytosol 0.438718643009347 0.438718145874073 0 0 hPsi_site_13483 iPseU_CNN:0;iRNA_PseU:0 13484 chr11 44074280 44074280 1 + G A ESCA 44074279 + 44074259 44074299 41 TCCCGCCTGTATGCAAAGGTTGAGTTGATTCCTGTCCACCT TCCCGCCTGTATGCAAAGGTTAAGTTGATTCCTGTCCACCT < 41bp 0.482716595337943 0.86522859279558 0.6116501 0.80137134 prediction 0.73045718559116 Functional Gain - ACCSL ENSG00000205126 CDS Human protein_coding chr11:44074279 chr11:44074280 nonsynonymous SNV 0.017 1 22 hPsi_associated_SNPs_19760 0 0 0 0 2 Exosome 0.43876958212958 0.438097545381517 0.37944248 0 hPsi_site_13484 iPseU_CNN:0.37944248;iRNA_PseU:0 13485 chr11 113212607 113212607 1 + G A UCEC 113212606 + 113212586 113212626 41 AGTTGAAGAAATGGTCTGTGTGTCTGTTCTCAAGCTCTGGC AGTTGAAGAAATGGTCTGTGTATCTGTTCTCAAGCTCTGGC < 41bp 0.478387484292121 0.865211782675968 0.3132745 0.38107443 prediction 0.730423565351936 Functional Gain - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113212606 chr11:113212607 synonymous SNV . 0 22 hPsi_associated_SNPs_19761 0 0 1 0 2 cytosol 0.438743683356303 0.438716908966829 0 0 hPsi_site_13485 iPseU_CNN:0;iRNA_PseU:0 13486 chr19 50881527 50881527 1 + G A UCEC 50881526 + 50881506 50881546 41 CTCCGGCTTCCACTACAACGTGCTCAGCTGCGAAGGCTGCA CTCCGGCTTCCACTACAACGTACTCAGCTGCGAAGGCTGCA < 41bp 0.493811450778795 0.865201543957977 0.27561492 0.70144635 prediction 0.730403087915953 Functional Gain - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881526 chr19:50881527 synonymous SNV . 0 22 hPsi_associated_SNPs_19762 0 0 1 0 1 Ribosome 0.441828383546929 0.43874195740951 0.4028927 0 hPsi_site_13486 iPseU_CNN:0.4028927;iRNA_PseU:0 13487 chr12 5154843 5154843 1 + G A OV 5154842 + 5154822 5154862 41 CGGGGTCCTCACCATTGCCCTGCCTGTGCCCGTCATCGTCT CGGGGTCCTCACCATTGCCCTACCTGTGCCCGTCATCGTCT < 41bp 0.493829771121081 0.865192763784712 0.22422805 0.83098626 prediction 0.730385527569423 Functional Gain - KCNA5 ENSG00000130037 CDS Human protein_coding chr12:5154842 chr12:5154843 synonymous SNV . 0 22 hPsi_associated_SNPs_19763 0 0 0 0 0 exosome 0.438704802089597 0.438608445115473 0.66197252 0 hPsi_site_13487 iPseU_CNN:0.66197252;iRNA_PseU:0 13488 chr7 106820368 106820368 1 + G A PAAD 106820367 + 106820347 106820387 41 GGAAGTGAAGACAAATCAGATGCCTAATGCAGTACAGAAAC GGAAGTGAAGACAAATCAGATACCTAATGCAGTACAGAAAC < 41bp 0.499181514181625 0.865184270313151 0.20388064 0.34212464 prediction 0.730368540626301 Functional Gain - HBP1 ENSG00000105856 CDS Human protein_coding chr7:106820367 chr7:106820368 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19764 0 0 1 0 0 Ribosome 0.438559823379922 0.43819765159524 0 0 hPsi_site_13488 iPseU_CNN:0;iRNA_PseU:0 13489 chr12 6567868 6567868 1 + G A LAML 6567867 + 6567847 6567887 41 CTCTGCTGCCCACCCTCATCTGCGACATTGCTGGCTATTAC CTCTGCTGCCCACCCTCATCTACGACATTGCTGGCTATTAC < 41bp 0.482408724946044 0.865183278755326 0.36431426 0.5424395 prediction 0.730366557510651 Functional Gain - TAPBPL ENSG00000139192 CDS Human protein_coding chr12:6567867 chr12:6567868 nonsynonymous SNV 0.020 4 22 hPsi_associated_SNPs_19765 0 0 0 0 1 chromatin 0.438562965703471 0.438716005841659 0.0848789999999999 0 hPsi_site_13489 iPseU_CNN:0.0848789999999999;iRNA_PseU:0 13490 chr15 92987932 92987932 1 + G A SKCM 92987931 + 92987911 92987951 41 CAAGACAGACCTGGTAACCATGAACCCCTCGGTCATCCAGC CAAGACAGACCTGGTAACCATAAACCCCTCGGTCATCCAGC < 41bp 0.475793544630309 0.865181974054924 0.24235147 0.29941428 prediction 0.730363948109849 Functional Gain - ST8SIA2 ENSG00000140557 CDS Human protein_coding chr15:92987931 chr15:92987932 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19766 0 0 0 0 1 Nucleus 0.438718836554822 0.438738078742661 0 0 hPsi_site_13490 iPseU_CNN:0;iRNA_PseU:0 13491 chr22 23495275 23495275 1 + G A CESC 23495274 + 23495254 23495294 41 GCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGAT GCCACCATTGGGGTGGACTTTAAAATTGAGCGCTTTGAGAT < 41bp 0.515013675028162 0.880191926756559 0.2554038 0.3422639 prediction 0.730356503456795 Functional Gain - RAB36 ENSG00000100228 CDS Human protein_coding chr22:23495274 chr22:23495275 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19767 0 0 0 0 2 Nucleus 0.440558483866313 0.438718730211009 0 0 hPsi_site_13491 iPseU_CNN:0;iRNA_PseU:0 13492 chr7 150747283 150747283 1 + G A HNSC 150747282 + 150747262 150747302 41 ACTAGGGGTGGCATGGGCAATGGGCTGGACATCATGCTGGA ACTAGGGGTGGCATGGGCAATAGGCTGGACATCATGCTGGA < 41bp 0.476004261409285 0.865171967253612 0.20133054 0.3143676 prediction 0.730343934507224 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150747282 chr7:150747283 nonsynonymous SNV 0.962 3 22 hPsi_associated_SNPs_19768 0 0 0 1 2 exosome 0.438697686660872 0.438696253165266 0 0 hPsi_site_13492 iPseU_CNN:0;iRNA_PseU:0 13493 chr11 77301394 77301394 1 + G A LUSC 77301393 + 77301373 77301413 41 GTCCCCCGAGACGGGTGCGGTGAGGCTATTGGCTCAGCTGG GTCCCCCGAGACGGGTGCGGTAAGGCTATTGGCTCAGCTGG < 41bp 0.513464094206806 0.878635771609244 0.4613957 0.86563456 prediction 0.730343354804877 Functional Gain - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301393 chr11:77301394 synonymous SNV . 0 22 hPsi_associated_SNPs_19769 0 0 1 0 0 Ribosome 0.438718591650496 0.438719418094385 0.73126912 0 hPsi_site_13493 iPseU_CNN:0.73126912;iRNA_PseU:0 13494 chr1 201970799 201970799 1 + G A UCEC 201970798 + 201970778 201970818 41 TCCTCACAGGCCTATGTGCATGAATTCAAATTCCGAAGCAT TCCTCACAGGCCTATGTGCATAAATTCAAATTCCGAAGCAT < 41bp 0.491205752820651 0.865168462027678 0.4284201 0.66674703 prediction 0.730336924055356 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201970798 chr1:201970799 nonsynonymous SNV 0.376 1 22 hPsi_associated_SNPs_19770 0 0 1 0 2 Ribosome 0.438718941580669 0.438718564501577 0.33349406 0 hPsi_site_13494 iPseU_CNN:0.33349406;iRNA_PseU:0 13495 chr3 183454543 183454543 1 + G A CESC 183454542 + 183454522 183454562 41 CTGACCAGAAGAGGCTGGGGTGAGTTTCCCGTCAGAGTTCA CTGACCAGAAGAGGCTGGGGTAAGTTTCCCGTCAGAGTTCA < 41bp 0.489935244162141 0.865163368345089 0.25557348 0.37782502 prediction 0.730326736690178 Functional Gain - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183454542 chr3:183454543 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19771 0 0 1 0 2 Nucleus 0.438718592957677 0.438718592942304 0 0 hPsi_site_13495 iPseU_CNN:0;iRNA_PseU:0 13496 chr22 19119328 19119328 1 + G A STAD 19119327 + 19119307 19119347 41 TCGTCCACCGGGACCTCAAGTGCGAGAACCTTCTCCTCGAC TCGTCCACCGGGACCTCAAGTACGAGAACCTTCTCCTCGAC < 41bp 0.503916531131869 0.869059436788842 0.30889797 0.5508795 prediction 0.730285811313945 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119327 chr22:19119328 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_19772 0 0 0 0 0 exosome 0.438238872101641 0.439262955433382 0.101759 0 hPsi_site_13496 iPseU_CNN:0.101759;iRNA_PseU:0 13497 chr9 131140322 131140322 1 + G A LIHC 131140321 + 131140301 131140341 41 GTCCTCCTTTGCAGAGGTGGTGCGGAGCTCCTGTTTGACGG GTCCTCCTTTGCAGAGGTGGTACGGAGCTCCTGTTTGACGG < 41bp 0.481564601632636 0.865142884726154 0.22765234 0.37261713 prediction 0.730285769452308 Functional Gain - URM1 ENSG00000167118 CDS Human protein_coding chr9:131140321 chr9:131140322 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_19773 0 0 1 2 3 Ribosome 0.43871669879716 0.438297360886705 0 0 hPsi_site_13497 iPseU_CNN:0;iRNA_PseU:0 13498 chr22 29140641 29140641 1 + G A BLCA 29140640 + 29140620 29140660 41 AGAGAAGCATTCGACCCTGGTGAATGATGCCTATAAGACCC AGAGAAGCATTCGACCCTGGTAAATGATGCCTATAAGACCC < 41bp 0.506553486389113 0.871692534314623 0.26128525 0.5834469 prediction 0.73027809585102 Functional Gain - HSCB ENSG00000100209 CDS Human protein_coding chr22:29140640 chr22:29140641 synonymous SNV . 0 22 hPsi_associated_SNPs_19774 0 0 1 0 2 Ribosome 0.438718568240705 0.438718593041438 0.1668938 0 hPsi_site_13498 iPseU_CNN:0.1668938;iRNA_PseU:0 13499 chr14 24030569 24030569 1 + C T SKCM 24030570 - 24030550 24030590 41 TGTCCAGCATCCTCCCCATCTGGACCCCTCCCCAGGAGGTG TGTCCAGCATCCTCCCCATCTAGACCCCTCCCCAGGAGGTG < 41bp 0.518929736813663 0.884062693550071 0.29085842 0.5067704 prediction 0.730265913472814 Functional Gain - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24030570 chr14:24030569 synonymous SNV . 0 22 hPsi_associated_SNPs_19775 0 0 0 0 1 Nucleus 0.43796634052939 0.438718593005732 0.0135407999999999 0 hPsi_site_13499 iPseU_CNN:0.0135407999999999;iRNA_PseU:0 13500 chr11 63721519 63721519 1 + G A UCEC 63721518 + 63721498 63721538 41 CCAGTTCTTCAGAGAAGCGTTGCAGTAAGGAGCTGGGTGTG CCAGTTCTTCAGAGAAGCGTTACAGTAAGGAGCTGGGTGTG < 41bp 0.510776461079968 0.875887754625274 0.24414694 0.5355371 prediction 0.730222587090613 Functional Gain - NAA40 ENSG00000110583 CDS Human protein_coding chr11:63721518 chr11:63721519 synonymous SNV . 0 22 hPsi_associated_SNPs_19776 0 0 1 1 2 Ribosome 0.438714126747655 0.438727293046339 0.0710742 0 hPsi_site_13500 iPseU_CNN:0.0710742;iRNA_PseU:0 13501 chr1 154517326 154517326 1 + G A SKCM 154517325 + 154517305 154517345 41 GTGGTCATGTTCATTGATTTTGGACAGTTGGCCACCATCCC GTGGTCATGTTCATTGATTTTAGACAGTTGGCCACCATCCC < 41bp 0.519650996571672 0.88475938922424 0.26489392 0.31832334 prediction 0.730216785305137 Functional Gain - TDRD10 ENSG00000163239 CDS Human protein_coding chr1:154517325 chr1:154517326 nonsynonymous SNV 0.231 3 22 hPsi_associated_SNPs_19777 0 0 0 0 2 exosome 0.438738698652093 0.439158281252093 0 0 hPsi_site_13501 iPseU_CNN:0;iRNA_PseU:0 13502 chr5 149907741 149907741 1 + G A UCEC 149907740 + 149907720 149907760 41 CACAAGCTTGTCTTCGTGGATGCCGTGGCCTTCCTCACGGG CACAAGCTTGTCTTCGTGGATACCGTGGCCTTCCTCACGGG < 41bp 0.482576566698084 0.865102308817628 0.5027068 0.83589065 prediction 0.730204617635256 Functional Gain - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149907740 chr5:149907741 nonsynonymous SNV 0.079 2 22 hPsi_associated_SNPs_19778 0 0 1 0 0 Cytosol 0.438828525207297 0.438854492741503 0.6663677 0 hPsi_site_13502 iPseU_CNN:0.6663677;iRNA_PseU:0 13503 chr11 64135729 64135729 1 + G A STAD 64135728 + 64135708 64135748 41 GGTGGCCAGGAGCGCTATGATGCAGGTGGGCTGGGCTGGGC GGTGGCCAGGAGCGCTATGATACAGGTGGGCTGGGCTGGGC < 41bp 0.511878894037229 0.876961534626216 0.21340814 0.5565903 prediction 0.730165281177974 Functional Gain - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64135728 chr11:64135729 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19779 0 0 0 0 1 chromatin 0.438718570388196 0.438718592981188 0.1131806 0 hPsi_site_13503 iPseU_CNN:0.1131806;iRNA_PseU:0 13504 chr11 18723274 18723274 1 + G A GBM 18723273 + 18723253 18723293 41 AGGTGCCTTCACCTACCTGGTGGGGGTCTATGTGGCCCTTA AGGTGCCTTCACCTACCTGGTAGGGGTCTATGTGGCCCTTA < 41bp 0.516011828806564 0.881078962482199 0.21424603 0.64280796 prediction 0.730134267351269 Functional Gain - TMEM86A ENSG00000151117 CDS Human protein_coding chr11:18723273 chr11:18723274 synonymous SNV . 0 22 hPsi_associated_SNPs_19780 0 0 1 0 0 Endoplasmic reticulum 0.43871912447556 0.437465551103541 0.28561592 0 hPsi_site_13504 iPseU_CNN:0.28561592;iRNA_PseU:0 13505 chr17 61607841 61607841 1 + G A KIRC 61607840 + 61607820 61607860 41 TCCAGCTCCACCACGGAGATTGAGATCATCGCGCCCCATAA TCCAGCTCCACCACGGAGATTAAGATCATCGCGCCCCATAA < 41bp 0.516993547317931 0.882046311185975 0.35591048 0.50000685 prediction 0.730105527736088 Functional Gain - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61607840 chr17:61607841 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_19781 0 0 0 0 1 unknown 0.438719875665873 0.4387184962005 1.37000000000054e-05 0 hPsi_site_13505 iPseU_CNN:1.37000000000054e-05;iRNA_PseU:0 13506 chr20 35929702 35929702 1 + G A UCEC 35929701 + 35929681 35929721 41 AGACTTCTCACCTCCGGAGGTGCCCGAGCCCACTTTCCTGG AGACTTCTCACCTCCGGAGGTACCCGAGCCCACTTTCCTGG < 41bp 0.51722994957065 0.88227708802066 0.24390447 0.63984376 prediction 0.73009427690002 Functional Gain - MANBAL ENSG00000101363 CDS Human protein_coding chr20:35929701 chr20:35929702 synonymous SNV . 0 22 hPsi_associated_SNPs_19782 0 0 1 0 1 Ribosome 0.438718616778969 0.438718692889859 0.27968752 0 hPsi_site_13506 iPseU_CNN:0.27968752;iRNA_PseU:0 13507 chr1 156255497 156255497 1 + G A UCEC 156255496 + 156255476 156255516 41 GGGCGAGTGCCGAACCTTCATGCCCCCCCGGGTCACCCACC GGGCGAGTGCCGAACCTTCATACCCCCCCGGGTCACCCACC < 41bp 0.481699395453095 0.865014936453409 0.15997446 0.3913002 prediction 0.730029872906818 Functional Gain - TMEM79 ENSG00000163472 CDS Human protein_coding chr1:156255496 chr1:156255497 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_19783 0 0 0 0 0 cytosol 0.438718614899024 0.438718616658605 0 0 hPsi_site_13507 iPseU_CNN:0;iRNA_PseU:0 13508 chr14 62547711 62547711 1 + G A STAD 62547710 + 62547690 62547730 41 CCAGATAAGGACCGAAGTGGTGTCAACTCCTGGCAAGTTCA CCAGATAAGGACCGAAGTGGTATCAACTCCTGGCAAGTTCA < 41bp 0.482469918899049 0.865010311461654 0.43854547 0.86602545 prediction 0.730020622923308 Functional Gain - SYT16 ENSG00000139973 CDS Human protein_coding chr14:62547710 chr14:62547711 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_19784 0 0 0 0 0 exosome 0.438718842551257 0.438718792261519 0.7320509 0 hPsi_site_13508 iPseU_CNN:0.7320509;iRNA_PseU:0 13509 chr19 57133722 57133722 1 + G A COAD 57133721 + 57133701 57133741 41 TCGGCGTGAAGCCGTTCGAGTGCAGCGAGTGCGGCAAGGCC TCGGCGTGAAGCCGTTCGAGTACAGCGAGTGCGGCAAGGCC < 41bp 0.514223131681797 0.87921989185362 0.2781065 0.8467854 prediction 0.729993520343646 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133721 chr19:57133722 nonsynonymous SNV 0.178 4 22 hPsi_associated_SNPs_19785 0 0 0 0 0 exosome 0.438723220588902 0.438665088631039 0.6935708 0 hPsi_site_13509 iPseU_CNN:0.6935708;iRNA_PseU:0 13510 chr9 134394817 134394817 1 + G A UCEC 134394816 + 134394796 134394836 41 GAACGGGAGCTGCACTCACCTGCGCAGGTGGACGTCAGCAG GAACGGGAGCTGCACTCACCTACGCAGGTGGACGTCAGCAG < 41bp 0.518169264081221 0.883164175584099 0.2665024 0.36908245 prediction 0.729989823005755 Functional Gain - POMT1 ENSG00000130714 CDS Human protein_coding chr9:134394816 chr9:134394817 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_19786 0 0 1 0 2 Endoplasmic reticulum 0.438699369607416 0.438560504135852 0 0 hPsi_site_13510 iPseU_CNN:0;iRNA_PseU:0 13511 chr19 45911616 45911616 1 + G A LUSC 45911615 + 45911595 45911635 41 ATCCCTGTCAGGGAGCCCTCTGCAGCCCATCCCAGCAAGTC ATCCCTGTCAGGGAGCCCTCTACAGCCCATCCCAGCAAGTC < 41bp 0.481260237828296 0.864986308586102 0.43595046 0.6864358 prediction 0.729972617172203 Functional Gain - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45911615 chr19:45911616 synonymous SNV . 0 22 hPsi_associated_SNPs_19787 0 0 1 0 0 Ribosome 0.438716762562912 0.438759114643489 0.3728716 0 hPsi_site_13511 iPseU_CNN:0.3728716;iRNA_PseU:0 13512 chr12 32480850 32480850 1 + G A UCEC 32480849 + 32480829 32480869 41 GGCCCACATGGAGAAGGAGTTGCAAAAGATGACCAGCATAG GGCCCACATGGAGAAGGAGTTACAAAAGATGACCAGCATAG < 41bp 0.489988321451126 0.86498452220392 0.33068806 0.73780704 prediction 0.729969044407841 Functional Gain - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32480849 chr12:32480850 synonymous SNV . 0 22 hPsi_associated_SNPs_19788 0 0 0 0 0 Nucleus 0.438720273652636 0.438679228001607 0.47561408 0 hPsi_site_13512 iPseU_CNN:0.47561408;iRNA_PseU:0 13513 chr1 110213996 110213996 1 + G A UCEC 110213995 + 110213975 110214015 41 GGGAAGCAGCCATGGTTTCTTGGGGACAAGGTAATGGGGGC GGGAAGCAGCCATGGTTTCTTAGGGACAAGGTAATGGGGGC < 41bp 0.503410664408983 0.868395168780593 0.1462254 0.3293754 prediction 0.72996900874322 Functional Gain - GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110213995 chr1:110213996 nonsynonymous SNV 0.467 3 22 hPsi_associated_SNPs_19789 0 0 1 0 2 Cytosol 0.438718592997601 0.438718593073889 0 0 hPsi_site_13513 iPseU_CNN:0;iRNA_PseU:0 13514 chrX 101822804 101822804 1 + G A UCEC 101822803 + 101822783 101822823 41 GAAAGAGAGTCTCCAGGTTCTGTTCTTGCCTTCACCCGAAC GAAAGAGAGTCTCCAGGTTCTATTCTTGCCTTCACCCGAAC < 41bp 0.493173124391026 0.864982756718868 0.9144373 0.9530944 prediction 0.729965513437736 Functional Gain - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101822803 chrX:101822804 . . 0 22 hPsi_associated_SNPs_19790 0 0 0 0 0 unknown 0.438719271826211 0.438719306296613 0.0773142 0 hPsi_site_13514 iPseU_CNN:0.0773142;iRNA_PseU:0 13515 chr11 113856768 113856768 1 + G A rs34327364 113856767 + 113856747 113856787 41 CAACATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCCG CAACATCTCTTTGTGGCGCTTACCAGAAAAGGTGAAATCCG < 41bp 0.492454368812912 0.86497793062031 0.1948249 0.42069232 prediction 0.72995586124062 Functional Gain - HTR3A ENSG00000166736 CDS Human protein_coding chr11:113856767 chr11:113856768 synonymous SNV . 0 22 hPsi_associated_SNPs_19791 0 0 0 0 1 Cytosol 0.438719349628795 0.438716259264405 0 0 hPsi_site_13515 iPseU_CNN:0;iRNA_PseU:0 13516 chr17 33456653 33456653 1 + G A SKCM 33456652 + 33456632 33456672 41 TGCAGCCAACACAGCTGGGGTGGGGAAGTGGTGCAAGCCCT TGCAGCCAACACAGCTGGGGTAGGGAAGTGGTGCAAGCCCT < 41bp 0.485211640010336 0.864962860787703 0.13690615 0.16380152 prediction 0.729925721575406 Functional Gain - FNDC8 ENSG00000073598 CDS Human protein_coding chr17:33456652 chr17:33456653 synonymous SNV . 0 22 hPsi_associated_SNPs_19792 0 0 0 0 1 exosome 0.438718716905241 0.438718501737487 0 0 hPsi_site_13516 iPseU_CNN:0;iRNA_PseU:0 13517 chr9 990423 990423 1 + G A LUSC 990422 + 990402 990442 41 GGGCTGTGGCGGGGACCTGGTGAGCGCCGTGGAAGTCCTTC GGGCTGTGGCGGGGACCTGGTAAGCGCCGTGGAAGTCCTTC < 41bp 0.518711724888664 0.88367189550908 0.35005218 0.8882462 prediction 0.729920341240833 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990422 chr9:990423 synonymous SNV . 0 22 hPsi_associated_SNPs_19793 0 0 0 0 0 unknown 0.439414129839219 0.4384324492651 0.7764924 0 hPsi_site_13517 iPseU_CNN:0.7764924;iRNA_PseU:0 13518 chr19 12858242 12858242 1 + G A BLCA 12858241 + 12858221 12858261 41 TTCATCTGCGTATGCATTGCTGAGTTCCTGTCCCTGTATGA TTCATCTGCGTATGCATTGCTAAGTTCCTGTCCCTGTATGA < 41bp 0.481367453725011 0.864957554896299 0.33021626 0.8199481 prediction 0.729915109792598 Functional Gain - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12858241 chr19:12858242 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_19794 0 0 1 0 1 Ribosome 0.438666273978664 0.437808449308116 0.6398962 0 hPsi_site_13518 iPseU_CNN:0.6398962;iRNA_PseU:0 13519 chr20 3728911 3728911 1 + G A SKCM 3728910 + 3728890 3728930 41 AGAGCAGCTACTCATCGCCCTGGAGCCCGAGGCCGCCTCGG AGAGCAGCTACTCATCGCCCTAGAGCCCGAGGCCGCCTCGG < 41bp 0.468632908922631 0.864945745513764 0.16458678 0.2654869 prediction 0.729891491027528 Functional Gain - HSPA12B ENSG00000132622 CDS Human protein_coding chr20:3728910 chr20:3728911 synonymous SNV . 0 22 hPsi_associated_SNPs_19795 0 0 0 0 1 exosome 0.438718593148356 0.438718593002069 0 0 hPsi_site_13519 iPseU_CNN:0;iRNA_PseU:0 13520 chr16 58052907 58052907 1 + G A rs146685901 58052906 + 58052886 58052926 41 TCCACCTCAGCCTGGCCTGGTGTGTGGGTGATGCACGTCTC TCCACCTCAGCCTGGCCTGGTATGTGGGTGATGCACGTCTC < 41bp 0.4933335819758 0.864944095047961 0.25612754 0.66129684 prediction 0.729888190095921 Functional Gain - USB1 ENSG00000103005 CDS Human protein_coding chr16:58052906 chr16:58052907 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19796 0 0 1 0 2 Ribosome 0.438933608779424 0.438739934524327 0.32259368 0 hPsi_site_13520 iPseU_CNN:0.32259368;iRNA_PseU:0 13521 chr10 104111081 104111081 1 + G A BRCA 104111080 + 104111060 104111100 41 GCTGTCACCCATGCTCGTTTTGTGGGCACGGATCCTGCCAG GCTGTCACCCATGCTCGTTTTATGGGCACGGATCCTGCCAG < 41bp 0.488014155699567 0.864937852676561 0.39477968 0.7059926 prediction 0.729875705353121 Functional Gain - GBF1 ENSG00000107862 CDS Human protein_coding chr10:104111080 chr10:104111081 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_19797 0 0 1 0 2 Nucleus 0.441050787306471 0.439734091220304 0.4119852 0 hPsi_site_13521 iPseU_CNN:0.4119852;iRNA_PseU:0 13522 chr6 26225652 26225652 1 + G A LUAD 26225651 + 26225631 26225671 41 GCGCTTCCAGAGTTCCGCGGTGATGGCGCTGCAGGAGGCCT GCGCTTCCAGAGTTCCGCGGTAATGGCGCTGCAGGAGGCCT < 41bp 0.495156967394095 0.864935459281711 0.3532362 0.6885745 prediction 0.729870918563422 Functional Gain - HIST1H3E ENSG00000196966 CDS Human other chr6:26225651 chr6:26225652 synonymous SNV . 0 22 hPsi_associated_SNPs_19798 0 0 1 0 0 exosome 0.438717680048983 0.438718593448088 0.377149 0 hPsi_site_13522 iPseU_CNN:0.377149;iRNA_PseU:0 13523 chr10 134523916 134523916 1 + G A LUSC 134523915 + 134523895 134523935 41 CTGGGAAACAAGCCCTTCCGTGTACTCGGGAATCCGGCACA CTGGGAAACAAGCCCTTCCGTATACTCGGGAATCCGGCACA < 41bp 0.477696635055859 0.864929436340204 0.2920152 0.49712256 prediction 0.729858872680407 Functional Gain - INPP5A ENSG00000068383 CDS Human protein_coding chr10:134523915 chr10:134523916 synonymous SNV . 0 22 hPsi_associated_SNPs_19799 0 0 1 0 2 Nucleus 0.44241132882718 0.441137855682496 0 0 hPsi_site_13523 iPseU_CNN:0;iRNA_PseU:0 13524 chr17 74383547 74383547 1 + G A SKCM 74383546 + 74383526 74383566 41 TGCAGTGGATGGGGAATTGATGGTTAGCGAGGCCGTGCAGG TGCAGTGGATGGGGAATTGATAGTTAGCGAGGCCGTGCAGG < 41bp 0.499592437826357 0.864928007293428 0.24555337 0.3361124 prediction 0.729856014586856 Functional Gain - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383546 chr17:74383547 nonsynonymous SNV 0.819 0 22 hPsi_associated_SNPs_19800 0 0 1 0 0 nucleolus 0.438718591587824 0.438718592996583 0 0 hPsi_site_13524 iPseU_CNN:0;iRNA_PseU:0 13525 chr3 129266436 129266436 1 + G A CESC 129266435 + 129266415 129266455 41 CCTCCGCTTCAAGTACCTGCTGAAGCAGGCGCTGGCCACTG CCTCCGCTTCAAGTACCTGCTAAAGCAGGCGCTGGCCACTG < 41bp 0.489305118605176 0.864916149592601 0.29087967 0.5559702 prediction 0.729832299185202 Functional Gain - H1FOO ENSG00000178804 CDS Human protein_coding chr3:129266435 chr3:129266436 synonymous SNV . 0 22 hPsi_associated_SNPs_19801 0 0 0 0 1 unknown 0.438717433213951 0.438718705487325 0.1119404 0 hPsi_site_13525 iPseU_CNN:0.1119404;iRNA_PseU:0 13526 chr3 52526143 52526143 1 + G A rs554709398 52526142 + 52526122 52526162 41 TCTTCCTCCTGGATGAGGACTGTGTCCACTACCCACTGCCC TCTTCCTCCTGGATGAGGACTATGTCCACTACCCACTGCCC < 41bp 0.504067028972592 0.868963389344744 0.34617573 0.4919651 prediction 0.729792720744305 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526142 chr3:52526143 nonsynonymous SNV 0.425 0 22 hPsi_associated_SNPs_19802 0 0 1 4 1 Cytosol 0.438719039824228 0.438720501266569 0 0 hPsi_site_13526 iPseU_CNN:0;iRNA_PseU:0 13527 chr1 166819226 166819226 1 + G A BRCA 166819225 + 166819205 166819245 41 GCAGCGAGGGATGCTGATCTTGAATGGCTTCCGGGGCCATG GCAGCGAGGGATGCTGATCTTAAATGGCTTCCGGGGCCATG < 41bp 0.488352941524665 0.864876923388581 0.36498642 0.7725756 prediction 0.729753846777161 Functional Gain - POGK ENSG00000143157 CDS Human protein_coding chr1:166819225 chr1:166819226 synonymous SNV . 0 22 hPsi_associated_SNPs_19803 0 0 1 0 0 Nucleus 0.438708099844396 0.438716211991043 0.5451512 0 hPsi_site_13527 iPseU_CNN:0.5451512;iRNA_PseU:0 13528 chr14 38679319 38679319 1 + G A UCEC 38679318 + 38679298 38679338 41 CCGTGGGGGCTATCTGCCTGTGCTACGTGCTCATCATTGCT CCGTGGGGGCTATCTGCCTGTACTACGTGCTCATCATTGCT < 41bp 0.510210740961694 0.875085428095128 0.13071892 0.7470252 prediction 0.729749374266867 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38679318 chr14:38679319 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19804 0 0 0 0 0 nucleus 0.438719213927791 0.438719271294409 0.4940504 0 hPsi_site_13528 iPseU_CNN:0.4940504;iRNA_PseU:0 13529 chr19 35823503 35823503 1 + G A SKCM 35823502 + 35823482 35823522 41 AAATGGGTTTTTGAGCACCCTGAAACCCTCTACGCCTGGGA AAATGGGTTTTTGAGCACCCTAAAACCCTCTACGCCTGGGA < 41bp 0.484971066981431 0.864874330422972 0.17387661 0.24432084 prediction 0.729748660845945 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35823502 chr19:35823503 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19805 0 0 0 0 2 Endoplasmic reticulum 0.438718595695065 0.438718592997287 0 0 hPsi_site_13529 iPseU_CNN:0;iRNA_PseU:0 13530 chr12 48534550 48534550 1 + G A STAD 48534549 + 48534529 48534569 41 ATGAACGTGGGGGCTCCGGCTGCAGGCATGAATGCTGCTGT ATGAACGTGGGGGCTCCGGCTACAGGCATGAATGCTGCTGT < 41bp 0.480693917447842 0.864836542160727 0.23104972 0.40886667 prediction 0.729673084321454 Functional Gain - PFKM ENSG00000152556 CDS Human protein_coding chr12:48534549 chr12:48534550 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_19806 0 0 1 0 0 Nucleus 0.432211015226922 0.438092993537527 0 0 hPsi_site_13530 iPseU_CNN:0;iRNA_PseU:0 13531 chr11 67196636 67196636 1 + G A BRCA 67196635 + 67196615 67196655 41 GGAGCTGACTGAGACCAGCGTGAACGTTGGCCCAGAGCGCA GGAGCTGACTGAGACCAGCGTAAACGTTGGCCCAGAGCGCA < 41bp 0.517011046892904 0.881846586605141 0.33824456 0.57444763 prediction 0.729671079424476 Functional Gain - RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67196635 chr11:67196636 synonymous SNV . 0 22 hPsi_associated_SNPs_19807 0 0 1 0 2 Ribosome 0.438022465709582 0.438718320519992 0.14889526 0 hPsi_site_13531 iPseU_CNN:0.14889526;iRNA_PseU:0 13532 chr19 19032529 19032529 1 + G A CESC 19032528 + 19032508 19032548 41 CCTGGGGAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCG CCTGGGGAAGCCTCTAGGGCTAAAAGACTGCATCATCGTCG < 41bp 0.492082634795593 0.864803395726593 0.5978067 0.8393124 prediction 0.729606791453187 Functional Gain - DDX49 ENSG00000105671 CDS Human protein_coding chr19:19032528 chr19:19032529 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_19808 0 0 1 1 1 Cytosol 0.438748532831311 0.438718597131339 0.4830114 0 hPsi_site_13532 iPseU_CNN:0.4830114;iRNA_PseU:0 13533 chr16 84690746 84690746 1 + G A COAD 84690745 + 84690725 84690765 41 GTACGGCGGGGAGCTGGTGCTGGATGGCGGCAACATTGACT GTACGGCGGGGAGCTGGTGCTAGATGGCGGCAACATTGACT < 41bp 0.481285005573302 0.864803302315126 0.14216658 0.3369694 prediction 0.729606604630252 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84690745 chr16:84690746 synonymous SNV . 0 22 hPsi_associated_SNPs_19809 0 0 1 0 0 chromatin 0.438718655040365 0.438729858139389 0 0 hPsi_site_13533 iPseU_CNN:0;iRNA_PseU:0 13534 chr11 113200685 113200685 1 + G A GBM 113200684 + 113200664 113200704 41 ATGAGAAGGCACTGGTGGATTGTGAGTGGGCTCTCAAGGTA ATGAGAAGGCACTGGTGGATTATGAGTGGGCTCTCAAGGTA < 41bp 0.509795615686217 0.87459514330529 0.30033904 0.6556418 prediction 0.729599055238147 Functional Gain - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113200684 chr11:113200685 nonsynonymous SNV 0.832 4 22 hPsi_associated_SNPs_19810 0 0 1 0 2 cytosol 0.43875209229851 0.438750256638066 0.3112836 0 hPsi_site_13534 iPseU_CNN:0.3112836;iRNA_PseU:0 13535 chr11 65154550 65154550 1 + G A BLCA 65154549 + 65154529 65154569 41 GCCGGGCAGCCCGGCCCCGCTGAGCGATCCCACCGAAGCAG GCCGGGCAGCCCGGCCCCGCTAAGCGATCCCACCGAAGCAG < 41bp 0.509645489742298 0.874429443956561 0.26616144 0.62809336 prediction 0.729567908428527 Functional Gain - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65154549 chr11:65154550 nonsynonymous SNV 0.720 2 22 hPsi_associated_SNPs_19811 0 0 1 0 2 Ribosome 0.438718367543408 0.438718714679935 0.25618672 0 hPsi_site_13535 iPseU_CNN:0.25618672;iRNA_PseU:0 13536 chr7 121651851 121651851 1 + G A UCEC 121651850 + 121651830 121651870 41 ACCCAGCAGTGATGCCATGATGCATGCACGTTCTTCAGGGC ACCCAGCAGTGATGCCATGATACATGCACGTTCTTCAGGGC < 41bp 0.498223462466335 0.86476334810313 0.14692146 0.35591704 prediction 0.729526696206259 Functional Gain - PTPRZ1 ENSG00000106278 CDS Human protein_coding chr7:121651850 chr7:121651851 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_19812 0 0 0 0 0 exosome 0.439079749769856 0.440802359374309 0 0 hPsi_site_13536 iPseU_CNN:0;iRNA_PseU:0 13537 chr19 41707258 41707258 1 + G A SKCM 41707257 + 41707237 41707277 41 CTATACCCTCCTGCTCCTGATGAAATACCCTCATGTCCAAA CTATACCCTCCTGCTCCTGATAAAATACCCTCATGTCCAAA < 41bp 0.482301901929277 0.864749931678298 0.22526762 0.30506048 prediction 0.729499863356595 Functional Gain - CYP2S1 ENSG00000167600 CDS Human protein_coding chr19:41707257 chr19:41707258 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_19813 0 0 0 0 1 Ribosome 0.438717944886789 0.438723362388178 0 0 hPsi_site_13537 iPseU_CNN:0;iRNA_PseU:0 13538 chr6 10726168 10726168 1 + G A COAD 10726167 + 10726147 10726187 41 GCCGTCCCTGGCTGCAGGGCTGCTCTTTGGCAGTCTAGCCG GCCGTCCCTGGCTGCAGGGCTACTCTTTGGCAGTCTAGCCG < 41bp 0.518768788984636 0.883517624601736 0.22016737 0.69033056 prediction 0.729497671234202 Functional Gain - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10726167 chr6:10726168 synonymous SNV . 0 22 hPsi_associated_SNPs_19814 0 0 1 0 2 Ribosome 0.438782438031944 0.438721275516794 0.38066112 0 hPsi_site_13538 iPseU_CNN:0.38066112;iRNA_PseU:0 13539 chr18 21705462 21705462 1 + G A SKCM 21705461 + 21705441 21705481 41 GTCTATTGAAGTGTTGTACTTGTGGAAAGCTCTTCCAAACT GTCTATTGAAGTGTTGTACTTATGGAAAGCTCTTCCAAACT < 41bp 0.511951232262464 0.87668880102656 0.41998243 0.42818385 prediction 0.729475137528193 Functional Gain - TTC39C ENSG00000168234 CDS Human protein_coding chr18:21705461 chr18:21705462 synonymous SNV . 0 22 hPsi_associated_SNPs_19815 0 0 1 0 2 Nucleus 0.43872344676794 0.43871957665523 0 0 hPsi_site_13539 iPseU_CNN:0;iRNA_PseU:0 13540 chr11 397006 397006 1 + G A SKCM 397005 + 396985 397025 41 GTGTCCTTCCATGAGCGCGGTGGGGTTGGGAGCCGGGCCGA GTGTCCTTCCATGAGCGCGGTAGGGTTGGGAGCCGGGCCGA < 41bp 0.491300629655508 0.864735452469074 0.29590648 0.6763117 prediction 0.729470904938148 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:397005 chr11:397006 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_19816 0 0 1 0 0 Ribosome 0.43871859300222 0.439254596764423 0.3526234 0 hPsi_site_13540 iPseU_CNN:0.3526234;iRNA_PseU:0 13541 chr19 51738465 51738465 1 + G A rs58981829 51738464 + 51738444 51738484 41 GGGGCCATTGGAGGAGCTGGTGTTACAGCCCTGCTCGCTCT GGGGCCATTGGAGGAGCTGGTATTACAGCCCTGCTCGCTCT < 41bp 0.508063554598212 0.872795655171358 0.38963407 0.8078846 prediction 0.729464201146291 Functional Gain - CD33 ENSG00000105383 CDS Human protein_coding chr19:51738464 chr19:51738465 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19817 0 0 1 0 2 exosome 0.4387185929951 0.438718592995089 0.6157692 0 hPsi_site_13541 iPseU_CNN:0.6157692;iRNA_PseU:0 13542 chr19 39955531 39955531 1 + G A BLCA 39955530 + 39955510 39955550 41 ACCCACGTGAAGCAGGCCATTGAGGGGGTGGGCAACCTGCG ACCCACGTGAAGCAGGCCATTAAGGGGGTGGGCAACCTGCG < 41bp 0.503226492927679 0.867956887473096 0.25245646 0.40534097 prediction 0.729460789090835 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39955530 chr19:39955531 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_19818 0 0 1 0 1 Nucleus 0.438713611427359 0.437995739308582 0 0 hPsi_site_13542 iPseU_CNN:0;iRNA_PseU:0 13543 chr19 41313417 41313417 1 + G A STAD 41313416 + 41313396 41313436 41 ATCACTGTCTGGTATTTTGATGCCAAGGAGCGGGCAGCAGC ATCACTGTCTGGTATTTTGATACCAAGGAGCGGGCAGCAGC < 41bp 0.507294219293399 0.872019628288429 0.19624344 0.32024705 prediction 0.729450817990062 Functional Gain - EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41313416 chr19:41313417 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19819 0 0 1 0 2 chromatin 0.4387166224236 0.438718577414346 0 0 hPsi_site_13543 iPseU_CNN:0;iRNA_PseU:0 13544 chr1 161133753 161133753 1 + G A COAD 161133752 + 161133732 161133772 41 CTTCGAGGTTTTTTGTGACCTGTCCCTGCCCATCCCCAAGG CTTCGAGGTTTTTTGTGACCTATCCCTGCCCATCCCCAAGG < 41bp 0.48757588281548 0.864716216616134 0.37425506 0.5678888 prediction 0.729432433232268 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161133752 chr1:161133753 synonymous SNV . 0 22 hPsi_associated_SNPs_19820 0 0 1 0 2 Cytosol 0.438718591156546 0.438718567553459 0.1357776 0 hPsi_site_13544 iPseU_CNN:0.1357776;iRNA_PseU:0 13545 chr6 41029212 41029212 1 + G A BLCA 41029211 + 41029191 41029231 41 TCTCGGGGATACCTAGAGGATGAGCATGCGGCTGCCCATGC TCTCGGGGATACCTAGAGGATAAGCATGCGGCTGCCCATGC < 41bp 0.47346798830962 0.864714235524528 0.3927903 0.7571918 prediction 0.729428471049056 Functional Gain - APOBEC2 ENSG00000124701 CDS Human protein_coding chr6:41029211 chr6:41029212 nonsynonymous SNV 0.984 3 22 hPsi_associated_SNPs_19821 0 0 0 0 0 chromatin 0.438352283632477 0.438718632967081 0.5143836 0 hPsi_site_13545 iPseU_CNN:0.5143836;iRNA_PseU:0 13546 chr1 159778970 159778970 1 + G A rs550903353 159778969 + 159778949 159778989 41 GAGACTCTGGGCTTTACTGGTGTGAGGTGGCCCCTGAGGGT GAGACTCTGGGCTTTACTGGTATGAGGTGGCCCCTGAGGGT < 41bp 0.480021560012137 0.864682428680333 0.527581 0.869685 prediction 0.729364857360667 Functional Gain - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159778969 chr1:159778970 nonsynonymous SNV 0.113 3 22 hPsi_associated_SNPs_19822 0 0 0 0 0 exosome 0.43871860711737 0.438718585924869 0.684208 0 hPsi_site_13546 iPseU_CNN:0.684208;iRNA_PseU:0 13547 chr1 159558228 159558228 1 + G A SKCM 159558227 + 159558207 159558247 41 GATCAATGGGACACCTTTGGTGAAAAAGGGTCTGCGACAGG GATCAATGGGACACCTTTGGTAAAAAAGGGTCTGCGACAGG < 41bp 0.497078998297812 0.864674256946559 0.24184379 0.41814712 prediction 0.729348513893117 Functional Gain - APCS ENSG00000132703 CDS Human protein_coding chr1:159558227 chr1:159558228 synonymous SNV . 0 22 hPsi_associated_SNPs_19823 0 0 0 0 0 Endoplasmic reticulum 0.438718592544311 0.43871858736284 0 0 hPsi_site_13547 iPseU_CNN:0;iRNA_PseU:0 13548 chr5 140751743 140751743 1 + G A LUSC 140751742 + 140751722 140751762 41 GGTGACCAAGGTGGTGGCGGTGGACGCAGACTCGGGATACA GGTGACCAAGGTGGTGGCGGTAGACGCAGACTCGGGATACA < 41bp 0.491104372223307 0.86467340073654 0.28984845 0.79199564 prediction 0.72934680147308 Functional Gain - PCDHGB3 ENSG00000262209 CDS Human protein_coding chr5:140751742 chr5:140751743 synonymous SNV . 0 22 hPsi_associated_SNPs_19824 0 0 0 0 0 exosome 0.438718593251712 0.43871879743206 0.58399128 0 hPsi_site_13548 iPseU_CNN:0.58399128;iRNA_PseU:0 13549 chr20 4163264 4163264 1 + G A CESC 4163263 + 4163243 4163283 41 GAGGAGCCCTTCTGGGGCCCTGAGTGCAACAGCCTACAGTT GAGGAGCCCTTCTGGGGCCCTAAGTGCAACAGCCTACAGTT < 41bp 0.502353511629065 0.867005344228537 0.1601075 0.28091192 prediction 0.729303665198943 Functional Gain - SMOX ENSG00000088826 CDS Human protein_coding chr20:4163263 chr20:4163264 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_19825 0 0 1 0 0 Ribosome 0.438718593171258 0.438718592995103 0 0 hPsi_site_13549 iPseU_CNN:0;iRNA_PseU:0 13550 chr7 75686750 75686750 1 + G A PRAD 75686749 + 75686729 75686769 41 CTACCTCGGACCTGAACAGCTGCCTGACTGCCTGAAAGGTT CTACCTCGGACCTGAACAGCTACCTGACTGCCTGAAAGGTT < 41bp 0.472720449273814 0.864646367723401 0.39665836 0.77069116 prediction 0.729292735446802 Functional Gain - MDH2 ENSG00000146701 CDS Human protein_coding chr7:75686749 chr7:75686750 synonymous SNV . 0 22 hPsi_associated_SNPs_19826 0 0 1 0 2 Cytosol 0.438718945760162 0.438718659369307 0.54138232 0 hPsi_site_13550 iPseU_CNN:0.54138232;iRNA_PseU:0 13551 chr19 33465049 33465049 1 + G A PRAD 33465048 + 33465028 33465068 41 AGCCCTACAGAAGTTTACTGTGCTGGACCTTGGAATGGTGC AGCCCTACAGAAGTTTACTGTACTGGACCTTGGAATGGTGC < 41bp 0.476065879322856 0.864639659689999 0.2954275 0.813906 prediction 0.729279319379999 Functional Gain - FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465048 chr19:33465049 synonymous SNV . 0 22 hPsi_associated_SNPs_19827 0 0 1 0 2 cytosol 0.438718624047182 0.438718597021592 0.627812 0 hPsi_site_13551 iPseU_CNN:0.627812;iRNA_PseU:0 13552 chr1 202287109 202287109 1 + G A SKCM 202287108 + 202287088 202287128 41 AAGCCCTGTGAGTACCTCTTTGAAAGCTGGGGCATCCGCCT AAGCCCTGTGAGTACCTCTTTAAAAGCTGGGGCATCCGCCT < 41bp 0.51412659075882 0.878765398030218 0.27973267 0.40920028 prediction 0.729277614542796 Functional Gain - LGR6 ENSG00000133067 CDS Human protein_coding chr1:202287108 chr1:202287109 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19828 0 0 0 0 1 nucleoplasm 0.438432759660354 0.438718536315366 0 0 hPsi_site_13552 iPseU_CNN:0;iRNA_PseU:0 13553 chr2 33036148 33036148 1 + G A KIRP 33036147 + 33036127 33036167 41 ATGACTGATCGAAGTGGAGATGTTGCAACTGGCCTCAAAGG ATGACTGATCGAAGTGGAGATATTGCAACTGGCCTCAAAGG < 41bp 0.508241620540368 0.87286458606075 0.40112615 0.66043824 prediction 0.729245931040766 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33036147 chr2:33036148 nonsynonymous SNV 0.657 0 22 hPsi_associated_SNPs_19829 0 0 1 0 1 Nucleus 0.439089035143078 0.438820638664467 0.32087648 0 hPsi_site_13553 iPseU_CNN:0.32087648;iRNA_PseU:0 13554 chr6 33409028 33409028 1 + G A UCEC 33409027 + 33409007 33409047 41 GGGTTCCATGCAGCAGTTTTTGTATGAGATCTCCAATCTGG GGGTTCCATGCAGCAGTTTTTATATGAGATCTCCAATCTGG < 41bp 0.50675938684185 0.871377991992628 0.32991993 0.5019165 prediction 0.729237210301556 Functional Gain - SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33409027 chr6:33409028 synonymous SNV . 0 22 hPsi_associated_SNPs_19830 0 0 1 0 1 chromatin 0.441087567334804 0.438769608343966 0.00383299999999998 0 hPsi_site_13554 iPseU_CNN:0.00383299999999998;iRNA_PseU:0 13555 chr2 85598640 85598640 1 + G A rs116470781 85598639 + 85598619 85598659 41 AAGCTGACCGGCTCCAAGTTTGACTGTGCCCTTCATGGAAA AAGCTGACCGGCTCCAAGTTTAACTGTGCCCTTCATGGAAA < 41bp 0.507066577907417 0.871677371468926 0.33710593 0.5362331 prediction 0.729221587123017 Functional Gain - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85598639 chr2:85598640 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_19831 0 0 1 0 1 Cytosol 0.438726078498238 0.43874366176916 0.0724662 0 hPsi_site_13555 iPseU_CNN:0.0724662;iRNA_PseU:0 13556 chr12 1742018 1742018 1 + G A SKCM 1742017 + 1741997 1742037 41 ACCAGTTCCGGCAGCGGCGGTGGAATTGCAGCACAGCGGAC ACCAGTTCCGGCAGCGGCGGTAGAATTGCAGCACAGCGGAC < 41bp 0.521610443885903 0.886199889017788 0.4345467 0.63014615 prediction 0.72917889026377 Functional Gain - WNT5B ENSG00000111186 CDS Human protein_coding chr12:1742017 chr12:1742018 stopgain 0.997 1 22 hPsi_associated_SNPs_19832 0 0 0 0 1 Endoplasmic reticulum 0.438886294067156 0.438643165643731 0.2602923 0 hPsi_site_13556 iPseU_CNN:0.2602923;iRNA_PseU:0 13557 chr1 152636858 152636858 1 + G A SKCM 152636857 + 152636837 152636877 41 CACCAGAGCCCCGATTGCTGTGAGAGTGAACCTTCTGGGGC CACCAGAGCCCCGATTGCTGTAAGAGTGAACCTTCTGGGGC < 41bp 0.496809527273696 0.864578415506079 0.35329998 0.65439427 prediction 0.729156831012159 Functional Gain - LCE2D ENSG00000187223 CDS Human protein_coding chr1:152636857 chr1:152636858 nonsynonymous SNV 0.057 1 22 hPsi_associated_SNPs_19833 0 0 0 0 0 unknown 0.438722963370132 0.438720997520405 0.30878854 0 hPsi_site_13557 iPseU_CNN:0.30878854;iRNA_PseU:0 13558 chr16 71571601 71571601 1 + G A CESC 71571600 + 71571580 71571620 41 TGGCGCTGGTCTTTGCCCTATGAAAAGGTTTCTCGACTTCA TGGCGCTGGTCTTTGCCCTATAAAAAGGTTTCTCGACTTCA < 41bp 0.509082891113999 0.873652083089134 0.2795136 0.33675647 prediction 0.729138383950269 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71571600 chr16:71571601 nonsynonymous SNV 0.943 1 22 hPsi_associated_SNPs_19834 0 0 0 0 0 exosome 0.438695837131655 0.438741812278129 0 0 hPsi_site_13558 iPseU_CNN:0;iRNA_PseU:0 13559 chr1 154247435 154247435 1 + G A rs141970914 154247434 + 154247414 154247454 41 TTTCTTCTGCAGTTTGATGATGTATGGCCTATGGACCCCCA TTTCTTCTGCAGTTTGATGATATATGGCCTATGGACCCCCA < 41bp 0.48589364371836 0.86456570111247 0.5648588 0.7162657 prediction 0.729131402224941 Functional Gain - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154247434 chr1:154247435 nonsynonymous SNV 0.424 0 22 hPsi_associated_SNPs_19835 2 0 1 0 2 Cytosol 0.438718624750323 0.438718605813215 0.3028138 0 hPsi_site_13559 iPseU_CNN:0.3028138;iRNA_PseU:0 13560 chr3 121980656 121980656 1 + G A PAAD 121980655 + 121980635 121980675 41 GATCCAGCATGTGGTAGAGGTGATTCAAAATTCCACGGCCA GATCCAGCATGTGGTAGAGGTAATTCAAAATTCCACGGCCA < 41bp 0.482749656934718 0.864558828800714 0.3227225 0.6435688 prediction 0.729117657601427 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:121980655 chr3:121980656 synonymous SNV . 0 22 hPsi_associated_SNPs_19836 0 0 0 0 0 exosome 0.438501000339463 0.442279359885076 0.2871376 0 hPsi_site_13560 iPseU_CNN:0.2871376;iRNA_PseU:0 13561 chr7 140402779 140402779 1 + G A UCEC 140402778 + 140402758 140402798 41 TCATGTGGTTCTGGATTCTCTGGCGCTTTTGGCATGACTCA TCATGTGGTTCTGGATTCTCTAGCGCTTTTGGCATGACTCA < 41bp 0.488063452109176 0.864534552486184 0.35913646 0.6866573 prediction 0.729069104972369 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140402778 chr7:140402779 stopgain 0.998 1 22 hPsi_associated_SNPs_19837 0 0 1 0 1 Ribosome 0.43854492228438 0.438717878999499 0.3733146 0 hPsi_site_13561 iPseU_CNN:0.3733146;iRNA_PseU:0 13562 chr3 50211717 50211717 1 + G A UCEC 50211716 + 50211696 50211736 41 GCCCTGGAACCGAACACACCTGTATGTGTGCGGGACAGGTG GCCCTGGAACCGAACACACCTATATGTGTGCGGGACAGGTG < 41bp 0.474130286562594 0.864533910453336 0.25893116 0.32338518 prediction 0.729067820906671 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50211716 chr3:50211717 synonymous SNV . 0 22 hPsi_associated_SNPs_19838 0 0 0 0 2 Endoplasmic reticulum 0.438622655658063 0.438134939923825 0 0 hPsi_site_13562 iPseU_CNN:0;iRNA_PseU:0 13563 chr5 140476222 140476222 1 + G A rs201488286 140476221 + 140476201 140476241 41 CAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCACA CAAGGCCACGGAGCCCGGGCTATTCGGCGTGTGGGCGCACA < 41bp 0.497644283619281 0.864519606309225 0.4821859 0.73702955 prediction 0.72903921261845 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476221 chr5:140476222 synonymous SNV . 0 22 hPsi_associated_SNPs_19839 0 0 1 0 0 exosome 0.438704208866683 0.43871757459622 0.4740591 0 hPsi_site_13563 iPseU_CNN:0.4740591;iRNA_PseU:0 13564 chr1 205039002 205039002 1 + G A LUSC 205039001 + 205038981 205039021 41 AGACGGCTTCGGCTACCTGCTGTCCTTCCGCAGGCAGGGCA AGACGGCTTCGGCTACCTGCTATCCTTCCGCAGGCAGGGCA < 41bp 0.477433983366188 0.864519363086332 0.33935228 0.8002893 prediction 0.729038726172665 Functional Gain - CNTN2 ENSG00000184144 CDS Human protein_coding chr1:205039001 chr1:205039002 synonymous SNV . 0 22 hPsi_associated_SNPs_19840 0 0 0 0 1 exosome 0.438718592972714 0.438718593007527 0.6005786 0 hPsi_site_13564 iPseU_CNN:0.6005786;iRNA_PseU:0 13565 chr5 150029320 150029320 1 + G A BRCA 150029319 + 150029299 150029339 41 CAGTCACGGATGGAGAAATATGTCATCGAGTCTTCAAGCCA CAGTCACGGATGGAGAAATATATCATCGAGTCTTCAAGCCA < 41bp 0.493727019306226 0.864519204600087 0.29731536 0.4405412 prediction 0.729038409200174 Functional Gain - SYNPO ENSG00000171992 CDS Human protein_coding chr5:150029319 chr5:150029320 nonsynonymous SNV 0.770 1 22 hPsi_associated_SNPs_19841 0 0 0 0 0 Endoplasmic reticulum 0.438715656494995 0.438701980920229 0 0 hPsi_site_13565 iPseU_CNN:0;iRNA_PseU:0 13566 chr1 101705200 101705200 1 + G A COAD 101705199 + 101705179 101705219 41 TCTGCTCTCCATCGTCATTCTGTACTGCAGAATCTACTCCT TCTGCTCTCCATCGTCATTCTATACTGCAGAATCTACTCCT < 41bp 0.488478482244209 0.864511957465039 0.26583737 0.48584893 prediction 0.729023914930078 Functional Gain - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101705199 chr1:101705200 synonymous SNV . 0 22 hPsi_associated_SNPs_19842 0 0 0 0 0 Endoplasmic reticulum 0.434676860606982 0.440349891314144 0 0 hPsi_site_13566 iPseU_CNN:0;iRNA_PseU:0 13567 chr15 64701923 64701923 1 + G A CESC 64701922 + 64701902 64701942 41 GCAGAAGCGAGAGGAGGAGCTGAGAGAACTTCGACACGCCT GCAGAAGCGAGAGGAGGAGCTAAGAGAACTTCGACACGCCT < 41bp 0.487444501102575 0.864508711579225 0.3183474 0.6044171 prediction 0.72901742315845 Functional Gain - TRIP4 ENSG00000103671 CDS Human protein_coding chr15:64701922 chr15:64701923 synonymous SNV . 0 22 hPsi_associated_SNPs_19843 0 0 0 0 0 Ribosome 0.438729051704808 0.43449610271422 0.2088342 0 hPsi_site_13567 iPseU_CNN:0.2088342;iRNA_PseU:0 13568 chr16 24920273 24920273 1 + G A LUSC 24920272 + 24920252 24920292 41 GGTCCTGGACTTTATTTACGTGCAGCCTCGATGCGACCAGC GGTCCTGGACTTTATTTACGTACAGCCTCGATGCGACCAGC < 41bp 0.479750468059581 0.864507824855563 0.2522891 0.37491515 prediction 0.729015649711126 Functional Gain - SLC5A11 ENSG00000158865 CDS Human protein_coding chr16:24920272 chr16:24920273 synonymous SNV . 0 22 hPsi_associated_SNPs_19844 0 0 0 0 0 exosome 0.438718592994799 0.438718588222511 0 0 hPsi_site_13568 iPseU_CNN:0;iRNA_PseU:0 13569 chr18 60612425 60612425 1 + G A LUAD 60612424 + 60612404 60612444 41 TCCCAACAACGATCATGAATTGCAGGCGCATGCACACCGTG TCCCAACAACGATCATGAATTACAGGCGCATGCACACCGTG < 41bp 0.510544041800901 0.875049500500386 0.3729763 0.62171364 prediction 0.729010917398969 Functional Gain - PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60612424 chr18:60612425 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19845 0 0 1 0 2 Cytosol 0.429923463255391 0.42949492255806 0.24342728 0 hPsi_site_13569 iPseU_CNN:0.24342728;iRNA_PseU:0 13570 chr17 73204694 73204694 1 + G A LUAD 73204693 + 73204673 73204713 41 CCAGGGGAGATGCTGGTATGTGAAACCTCCTTCAACAAAAA CCAGGGGAGATGCTGGTATGTAAAACCTCCTTCAACAAAAA < 41bp 0.505740623167148 0.870241928450043 0.2820554 0.7383162 prediction 0.729002610565791 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73204693 chr17:73204694 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_19846 0 0 1 0 2 Nucleus 0.438718592991594 0.43871858713005 0.4766324 0 hPsi_site_13570 iPseU_CNN:0.4766324;iRNA_PseU:0 13571 chr11 58972245 58972245 1 + G A HNSC 58972244 + 58972224 58972264 41 TCAGACACCGTCATCTGGAATGAGGTCCACCACAAGACAGA TCAGACACCGTCATCTGGAATAAGGTCCACCACAAGACAGA < 41bp 0.49071277979316 0.864484821496761 0.29741907 0.62209165 prediction 0.728969642993521 Functional Gain - DTX4 ENSG00000110042 CDS Human protein_coding chr11:58972244 chr11:58972245 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19847 0 0 0 0 1 Cytosol 0.438718874316226 0.438706603309688 0.2441833 0 hPsi_site_13571 iPseU_CNN:0.2441833;iRNA_PseU:0 13572 chr6 138727221 138727221 1 + G A SARC 138727220 + 138727200 138727240 41 ATTCCCTCTGAACAGCAATTTGATCCACCCAGGCCTTTAGA ATTCCCTCTGAACAGCAATTTAATCCACCCAGGCCTTTAGA < 41bp 0.511492559910223 0.875970980046926 0.22956848 0.6903635 prediction 0.728956840273407 Functional Gain - HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138727220 chr6:138727221 nonsynonymous SNV 0.963 1 22 hPsi_associated_SNPs_19848 0 0 1 0 1 Cytosol 0.438718592748521 0.43871858697145 0.380727 0 hPsi_site_13572 iPseU_CNN:0.380727;iRNA_PseU:0 13573 chr11 68852696 68852696 1 + G A LAML 68852695 + 68852675 68852715 41 CAGGTGGTCTACTACGTATTTGCCATCATTGGGATCAACTT CAGGTGGTCTACTACGTATTTACCATCATTGGGATCAACTT < 41bp 0.485022434354825 0.86447690161209 0.24642462 0.3575499 prediction 0.72895380322418 Functional Gain - TPCN2 ENSG00000162341 CDS Human protein_coding chr11:68852695 chr11:68852696 nonsynonymous SNV 0.347 5 22 hPsi_associated_SNPs_19849 0 0 1 0 2 chromatin 0.438719454691068 0.438718281440598 0 0 hPsi_site_13573 iPseU_CNN:0;iRNA_PseU:0 13574 chr5 40959625 40959625 1 + G A GBM 40959624 + 40959604 40959644 41 GGGAAGAAAACAAGAAGCCGTGAATGCAATAACCCACCTCC GGGAAGAAAACAAGAAGCCGTAAATGCAATAACCCACCTCC < 41bp 0.511620275611208 0.876084182284146 0.15404278 0.28478694 prediction 0.728927813345876 Functional Gain - C7 ENSG00000112936 CDS Human protein_coding chr5:40959624 chr5:40959625 nonsynonymous SNV 0.228 0 22 hPsi_associated_SNPs_19850 0 0 1 0 2 Endoplasmic reticulum 0.43871489141021 0.438718644889047 0 0 hPsi_site_13574 iPseU_CNN:0;iRNA_PseU:0 13575 chr19 10812882 10812882 1 + G A LUAD 10812881 + 10812861 10812901 41 CGCTCCCCCTACGACGGCAATGAGACCCTGCTGAGCCCGGA CGCTCCCCCTACGACGGCAATAAGACCCTGCTGAGCCCGGA < 41bp 0.480232573196287 0.864458529805694 0.27600646 0.3485764 prediction 0.728917059611389 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812881 chr19:10812882 nonsynonymous SNV 0.664 0 22 hPsi_associated_SNPs_19851 0 0 1 0 2 Ribosome 0.43871864024906 0.438718895219502 0 0 hPsi_site_13575 iPseU_CNN:0;iRNA_PseU:0 13576 chrX 77373596 77373596 1 + G A BRCA 77373595 + 77373575 77373615 41 GAAGGCTGGTGGGTTTTTGATGAAGAAGGAGCTGAACTACT GAAGGCTGGTGGGTTTTTGATAAAGAAGGAGCTGAACTACT < 41bp 0.477096789328124 0.864445927400366 0.26566318 0.4285571 prediction 0.728891854800732 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373595 chrX:77373596 nonsynonymous SNV 0.845 3 22 hPsi_associated_SNPs_19852 0 0 1 0 2 Ribosome 0.438718936971584 0.438718856001932 0 0 hPsi_site_13576 iPseU_CNN:0;iRNA_PseU:0 13577 chr18 48447459 48447459 1 + G A PAAD 48447458 + 48447438 48447478 41 GAACAGGCTGCTCTTGGAATTGCAAATCTTATAGTTATGTC GAACAGGCTGCTCTTGGAATTACAAATCTTATAGTTATGTC < 41bp 0.493831069239914 0.864426596530104 0.29043794 0.32730845 prediction 0.728853193060207 Functional Gain - ME2 ENSG00000082212 CDS Human protein_coding chr18:48447458 chr18:48447459 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19853 0 0 1 0 2 Ribosome 0.439255086710413 0.438778910993482 0 0 hPsi_site_13577 iPseU_CNN:0;iRNA_PseU:0 13578 chr12 95888810 95888810 1 + G A UCEC 95888809 + 95888789 95888829 41 GCCTGGCATTTCCTACTGGATGTTCTCTCAATAATTGTGCT GCCTGGCATTTCCTACTGGATATTCTCTCAATAATTGTGCT < 41bp 0.506659443567798 0.871083747841938 0.2791 0.3662939 prediction 0.72884860854828 Functional Gain - METAP2 ENSG00000111142 CDS Human protein_coding chr12:95888809 chr12:95888810 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19854 0 0 1 1 1 Ribosome 0.434828328395789 0.433914706025914 0 0 hPsi_site_13578 iPseU_CNN:0;iRNA_PseU:0 13579 chr1 248059394 248059394 1 + G A rs12083024 248059393 + 248059373 248059413 41 TGACCCTGCGCTTACCCCGCTGTGGGCACCACGAGGTGGAC TGACCCTGCGCTTACCCCGCTATGGGCACCACGAGGTGGAC < 41bp 0.507528921517252 0.871944075517988 0.38035357 0.66906905 prediction 0.728830308001472 Functional Gain - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059393 chr1:248059394 nonsynonymous SNV 0.486 4 22 hPsi_associated_SNPs_19855 0 0 0 0 0 exosome 0.438687451779666 0.438669154445413 0.3381381 0 hPsi_site_13579 iPseU_CNN:0.3381381;iRNA_PseU:0 13580 chr13 113974743 113974743 1 + G A GBM 113974742 + 113974722 113974762 41 CCACCTGGTGACTCTGGAGCTGCACAGCGAGGGCACCACCG CCACCTGGTGACTCTGGAGCTACACAGCGAGGGCACCACCG < 41bp 0.473386316026093 0.86441331704531 0.3206363 0.5756242 prediction 0.728826634090619 Functional Gain - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113974742 chr13:113974743 synonymous SNV . 0 22 hPsi_associated_SNPs_19856 0 0 1 0 2 Cytosol 0.43874793101023 0.438741863943893 0.1512484 0 hPsi_site_13580 iPseU_CNN:0.1512484;iRNA_PseU:0 13581 chr22 29446300 29446300 1 + G A PAAD 29446299 + 29446279 29446319 41 GGCCACGAGTTGCCGTCGTGTGCCTGCTGCTGCGAGCCCCA GGCCACGAGTTGCCGTCGTGTACCTGCTGCTGCGAGCCCCA < 41bp 0.512460944281274 0.876869675756073 0.25315428 0.5081762 prediction 0.728817462949596 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446299 chr22:29446300 nonsynonymous SNV 0.863 1 22 hPsi_associated_SNPs_19857 0 0 1 0 0 Ribosome 0.438749721167988 0.439500677974796 0.0163523999999999 0 hPsi_site_13581 iPseU_CNN:0.0163523999999999;iRNA_PseU:0 13582 chr16 66511573 66511573 1 + G A COAD 66511572 + 66511552 66511592 41 AGCTCTGACGGGGACGTGGATGCCACGGTGCTCAGGGAGCT AGCTCTGACGGGGACGTGGATACCACGGTGCTCAGGGAGCT < 41bp 0.478047757530711 0.864404981233204 0.33566487 0.76999754 prediction 0.728809962466407 Functional Gain - BEAN1 ENSG00000166546 CDS Human protein_coding chr16:66511572 chr16:66511573 nonsynonymous SNV 0.596 1 22 hPsi_associated_SNPs_19858 0 0 0 2 0 nucleus 0.438705465385286 0.438544188990151 0.53999508 0 hPsi_site_13582 iPseU_CNN:0.53999508;iRNA_PseU:0 13583 chr9 135042402 135042402 1 + G A SKCM 135042401 + 135042381 135042421 41 GAGCCCTCAGGCATCACATGTGGAGACCCCCCTGAGAGGTT GAGCCCTCAGGCATCACATGTAGAGACCCCCCTGAGAGGTT < 41bp 0.483533957569453 0.864402622076957 0.29463708 0.56232524 prediction 0.728805244153914 Functional Gain - NTNG2 ENSG00000196358 CDS Human protein_coding chr9:135042401 chr9:135042402 nonsynonymous SNV 0.888 5 22 hPsi_associated_SNPs_19859 0 0 0 0 1 exosome 0.438718592995106 0.438733536664836 0.12465048 0 hPsi_site_13583 iPseU_CNN:0.12465048;iRNA_PseU:0 13584 chr10 102739996 102739996 1 + G A SKCM 102739995 + 102739975 102740015 41 CGGCCCGTTGTGCCCACACGTGGACGGCCCCTGCTGCTCAA CGGCCCGTTGTGCCCACACGTAGACGGCCCCTGCTGCTCAA < 41bp 0.516914333154354 0.881311850215004 0.18341106 0.2242375 prediction 0.7287950341213 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102739995 chr10:102739996 nonsynonymous SNV 0.939 0 22 hPsi_associated_SNPs_19860 0 0 0 0 0 nucleoplasm 0.438718592994778 0.438702318885331 0 0 hPsi_site_13584 iPseU_CNN:0;iRNA_PseU:0 13585 chr22 27026312 27026312 1 + G A UCEC 27026311 + 27026291 27026331 41 TTCTCTTTTCCAGCTGGGTTTGCTCCCAGTTTCCGGGCTAC TTCTCTTTTCCAGCTGGGTTTACTCCCAGTTTCCGGGCTAC < 41bp 0.504668129034877 0.869062832275458 0.23606202 0.78110147 prediction 0.728789406481161 Functional Gain - CRYBA4 ENSG00000196431 CDS Human protein_coding chr22:27026311 chr22:27026312 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_19861 0 0 0 0 1 Cytosol 0.43871858765156 0.438718921074339 0.56220294 0 hPsi_site_13585 iPseU_CNN:0.56220294;iRNA_PseU:0 13586 chr17 43180396 43180396 1 + G A CESC 43180395 + 43180375 43180415 41 CCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGC CCAGCTCCTCACCAGGTACTTAAAGCAATTTCACCTTACGC < 41bp 0.479202758345996 0.864393947232263 0.2615564 0.36402053 prediction 0.728787894464526 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43180395 chr17:43180396 synonymous SNV . 0 22 hPsi_associated_SNPs_19862 0 0 1 0 1 Ribosome 0.438718594308925 0.438718600437157 0 0 hPsi_site_13586 iPseU_CNN:0;iRNA_PseU:0 13587 chr19 57955046 57955046 1 + G A rs141119297 57955045 + 57955025 57955065 41 AACAGGTCTTAAACAGTGGGTGGAAGCTGTACAGGGATACC AACAGGTCTTAAACAGTGGGTAGAAGCTGTACAGGGATACC < 41bp 0.498146938941243 0.864381842902829 0.20286074 0.54725975 prediction 0.728763685805659 Functional Gain - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57955045 chr19:57955046 stopgain 0.002 0 22 hPsi_associated_SNPs_19863 0 0 1 0 0 exosome 0.438718592995102 0.438718592995132 0.0945195000000001 0 hPsi_site_13587 iPseU_CNN:0.0945195000000001;iRNA_PseU:0 13588 chr14 24589033 24589033 1 + G A UCEC 24589032 + 24589012 24589052 41 AGTGTGGGATCGACGCACCATGCGGGAGGATGACCCCAAGC AGTGTGGGATCGACGCACCATACGGGAGGATGACCCCAAGC < 41bp 0.517105734418286 0.881486452997285 0.26625645 0.80002654 prediction 0.728761437157998 Functional Gain - DCAF11 ENSG00000100897 CDS Human protein_coding chr14:24589032 chr14:24589033 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_19864 0 0 1 0 1 Ribosome 0.440199250330691 0.439443651639102 0.60005308 0 hPsi_site_13588 iPseU_CNN:0.60005308;iRNA_PseU:0 13589 chr1 155290326 155290326 1 + G A LUAD 155290325 + 155290305 155290345 41 AGCCACATTATGGCTCTCATTGAACAGTACGCAGCACCCCT AGCCACATTATGGCTCTCATTAAACAGTACGCAGCACCCCT < 41bp 0.483933765448491 0.864380182126785 0.20147094 0.2530585 prediction 0.72876036425357 Functional Gain - FDPS ENSG00000160752 CDS Human protein_coding chr1:155290325 chr1:155290326 nonsynonymous SNV 0.374 0 22 hPsi_associated_SNPs_19865 0 0 1 0 0 Cytosol 0.438722224309034 0.439390364906702 0 0 hPsi_site_13589 iPseU_CNN:0;iRNA_PseU:0 13590 chr22 50928026 50928026 1 + G A rs2232885 50928025 + 50928005 50928045 41 GGGCCGCGACTACCAGCAGCTGTGCAGCCAGCAGGACCTGG GGGCCGCGACTACCAGCAGCTATGCAGCCAGCAGGACCTGG < 41bp 0.508978510652892 0.873346683698563 0.16218293 0.22887194 prediction 0.728736346091343 Functional Gain - MIOX ENSG00000100253 CDS Human protein_coding chr22:50928025 chr22:50928026 synonymous SNV . 0 22 hPsi_associated_SNPs_19866 0 0 0 0 3 exosome 0.438718592154507 0.438718592922307 0 0 hPsi_site_13590 iPseU_CNN:0;iRNA_PseU:0 13591 chr10 120889085 120889085 1 + G A HNSC 120889084 + 120889064 120889104 41 CAGACCAGACCTCTATGATGTGTTTGTGAATCTGGCAGAGA CAGACCAGACCTCTATGATGTATTTGTGAATCTGGCAGAGA < 41bp 0.518678239370916 0.883041229401637 0.25907755 0.73788434 prediction 0.728725980061442 Functional Gain - FAM45A ENSG00000119979 CDS Human protein_coding chr10:120889084 chr10:120889085 synonymous SNV . 0 22 hPsi_associated_SNPs_19867 0 0 0 0 2 Cytosol 0.438718033991167 0.438718521059362 0.47576868 0 hPsi_site_13591 iPseU_CNN:0.47576868;iRNA_PseU:0 13592 chr10 5951142 5951142 1 + G A KIRC 5951141 + 5951121 5951161 41 GATACACAGCCACCACTAAGTGCTCTCCGAGTGTGGATCCC GATACACAGCCACCACTAAGTACTCTCCGAGTGTGGATCCC < 41bp 0.468620759475936 0.864319819375495 0.25144723 0.4417587 prediction 0.72863963875099 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951141 chr10:5951142 nonsynonymous SNV 0.147 0 22 hPsi_associated_SNPs_19868 0 0 1 0 1 Ribosome 0.438708234779416 0.438739734234587 0 0 hPsi_site_13592 iPseU_CNN:0;iRNA_PseU:0 13593 chr20 33862325 33862325 1 + G A UCEC 33862324 + 33862304 33862344 41 CCTGTCCCTCTGCATCCTGGTGCTGGTCTACACCATCTTCC CCTGTCCCTCTGCATCCTGGTACTGGTCTACACCATCTTCC < 41bp 0.513040941677006 0.877343593797372 0.33797288 0.84211385 prediction 0.728605304240731 Functional Gain - MMP24 ENSG00000125966 CDS Human protein_coding chr20:33862324 chr20:33862325 synonymous SNV . 0 22 hPsi_associated_SNPs_19869 0 0 0 0 0 Ribosome 0.440095605713634 0.439056068251 0.6842277 0 hPsi_site_13593 iPseU_CNN:0.6842277;iRNA_PseU:0 13594 chr17 695048 695048 1 + G A GBM 695047 + 695027 695067 41 CGGAGCCAGTCAAGATTGGCTGCCTCATGTTGAGGTTCAGA CGGAGCCAGTCAAGATTGGCTACCTCATGTTGAGGTTCAGA < 41bp 0.506035600208573 0.870324257392422 0.28352585 0.611048 prediction 0.728577314367698 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:695047 chr17:695048 synonymous SNV . 0 22 hPsi_associated_SNPs_19870 0 0 1 0 0 chromatin 0.438792519746192 0.439069243940877 0.222096 0 hPsi_site_13594 iPseU_CNN:0.222096;iRNA_PseU:0 13595 chr1 22332203 22332203 1 + G A SKCM 22332202 + 22332182 22332222 41 GGGTGAGTACAACCTTGCTGTGAAGGAGGGCCCCGAGCAGG GGGTGAGTACAACCTTGCTGTAAAGGAGGGCCCCGAGCAGG < 41bp 0.513757294807818 0.878041511829941 0.31339133 0.6307092 prediction 0.728568434044247 Functional Gain - CELA3A ENSG00000142789 CDS Human protein_coding chr1:22332202 chr1:22332203 synonymous SNV . 0 22 hPsi_associated_SNPs_19871 0 0 0 0 2 Endoplasmic reticulum 0.438718593035474 0.438718592978097 0.2614184 0 hPsi_site_13595 iPseU_CNN:0.2614184;iRNA_PseU:0 13596 chr16 72094738 72094738 1 + G A BLCA 72094737 + 72094717 72094757 41 GGCTGAGTATGGTGTGTATGTGAAGGTGACTTCCATCCAGG GGCTGAGTATGGTGTGTATGTAAAGGTGACTTCCATCCAGG < 41bp 0.498238430413148 0.864270142852444 0.24746728 0.6234261 prediction 0.728540285704888 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094737 chr16:72094738 synonymous SNV . 0 22 hPsi_associated_SNPs_19872 0 0 1 0 0 cytosol 0.439822961379438 0.438748185976318 0.2468522 0 hPsi_site_13596 iPseU_CNN:0.2468522;iRNA_PseU:0 13597 chr17 26667448 26667448 1 + G A BLCA 26667447 + 26667427 26667467 41 GAAATCAAGGAATTGATGGCTGAAGCAAAGTATTACCTCAT GAAATCAAGGAATTGATGGCTAAAGCAAAGTATTACCTCAT < 41bp 0.515555688586236 0.879810025522926 0.25188679 0.33783764 prediction 0.728508673873379 Functional Gain - TNFAIP1 ENSG00000109079 CDS Human protein_coding chr17:26667447 chr17:26667448 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_19873 0 0 1 0 1 Ribosome 0.438719773857003 0.438718602149398 0 0 hPsi_site_13597 iPseU_CNN:0;iRNA_PseU:0 13598 chr8 21958132 21958132 1 + G A CESC 21958131 + 21958111 21958151 41 ATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCC ATCACCACACTCCGGCTGTTTAAGGAGCTGCTGCAGAAGCC < 41bp 0.477345925639933 0.864247539727218 0.2535092 0.50940335 prediction 0.728495079454437 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21958131 chr8:21958132 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_19874 0 0 1 0 1 chromatin 0.43871327329301 0.438718700943927 0.0188067000000001 0 hPsi_site_13598 iPseU_CNN:0.0188067000000001;iRNA_PseU:0 13599 chr1 101196997 101196997 1 + G A GBM 101196996 + 101196976 101197016 41 ATACTGGAAAAGCTCTTGTTTGTCAGGCTAAGTTACATATT ATACTGGAAAAGCTCTTGTTTATCAGGCTAAGTTACATATT < 41bp 0.503287541103561 0.867533833331646 0.31386298 0.39800796 prediction 0.72849258445617 Functional Gain - VCAM1 ENSG00000162692 CDS Human protein_coding chr1:101196996 chr1:101196997 nonsynonymous SNV 0.963 4 22 hPsi_associated_SNPs_19875 0 0 0 0 1 exosome 0.438717364601265 0.438718642202531 0 0 hPsi_site_13599 iPseU_CNN:0;iRNA_PseU:0 13600 chr2 106509517 106509517 1 + G A COAD 106509516 + 106509496 106509536 41 AGCTCGTGGACAATGTCTACTGCATTGGGCAGCGGCGCTTC AGCTCGTGGACAATGTCTACTACATTGGGCAGCGGCGCTTC < 41bp 0.509110581863185 0.873352722145431 0.32838202 0.41492537 prediction 0.728484280564492 Functional Gain - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106509516 chr2:106509517 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19876 0 0 1 1 1 Ribosome 0.438610327212779 0.438291650290547 0 0 hPsi_site_13600 iPseU_CNN:0;iRNA_PseU:0 13601 chr19 34900108 34900108 1 + G A COAD 34900107 + 34900087 34900127 41 GCTGAGGACTGGTGTGAAGGTGCTGATGACTGGGGAAGTGA GCTGAGGACTGGTGTGAAGGTACTGATGACTGGGGAAGTGA < 41bp 0.506067447137825 0.870283534334069 0.20755917 0.5313965 prediction 0.728432174392489 Functional Gain - PDCD2L ENSG00000126249;ENSG00000266953 CDS Human other chr19:34900107 chr19:34900108 nonsynonymous SNV 0.901 1 22 hPsi_associated_SNPs_19877 0 0 1 0 1 Ribosome 0.438557547291496 0.4377079992068 0.0627930000000001 0 hPsi_site_13601 iPseU_CNN:0.0627930000000001;iRNA_PseU:0 13602 chr1 210415316 210415316 1 + G A LUAD 210415315 + 210415295 210415335 41 TTCCTCTTCCTCTCCCCCTTTGCCTTTACCGAGTTGTTCCC TTCCTCTTCCTCTCCCCCTTTACCTTTACCGAGTTGTTCCC < 41bp 0.486758210473021 0.864196452417432 0.16913006 0.24698326 prediction 0.728392904834864 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415315 chr1:210415316 synonymous SNV . 0 22 hPsi_associated_SNPs_19878 0 0 1 0 0 exosome 0.438718592995102 0.438718592995095 0 0 hPsi_site_13602 iPseU_CNN:0;iRNA_PseU:0 13603 chr11 64111603 64111603 1 + G A rs75354902 64111602 + 64111582 64111622 41 GGATGGAGGCCCCCAGGCCTTGGACTTGGCTCCCCCGGCAT GGATGGAGGCCCCCAGGCCTTAGACTTGGCTCCCCCGGCAT < 41bp 0.481019176292674 0.864180708085198 0.3689443 0.6236549 prediction 0.728361416170395 Functional Gain - CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64111602 chr11:64111603 synonymous SNV . 0 22 hPsi_associated_SNPs_19879 0 0 0 0 0 Ribosome 0.438718479188879 0.438714056072709 0.2473098 0 hPsi_site_13603 iPseU_CNN:0.2473098;iRNA_PseU:0 13604 chr18 44627298 44627298 1 + G A UCEC 44627297 + 44627277 44627317 41 CACTGCCGACTTTCTGGATGTGCTAACTCACACCAAGCCCT CACTGCCGACTTTCTGGATGTACTAACTCACACCAAGCCCT < 41bp 0.493061394812175 0.864176638159419 0.22409585 0.6451148 prediction 0.728353276318838 Functional Gain - KATNAL2 ENSG00000167216 CDS Human protein_coding chr18:44627297 chr18:44627298 synonymous SNV . 0 22 hPsi_associated_SNPs_19880 0 0 0 0 1 chromatin 0.438509585059344 0.438363997624256 0.2902296 0 hPsi_site_13604 iPseU_CNN:0.2902296;iRNA_PseU:0 13605 chr14 38679687 38679687 1 + G A STAD 38679686 + 38679666 38679706 41 CTCAAGAGCCGTGCCTACAGTGTGGAAGACTTCCAACCTGA CTCAAGAGCCGTGCCTACAGTATGGAAGACTTCCAACCTGA < 41bp 0.508264153048533 0.872426677050447 0.28617167 0.6296477 prediction 0.728325048003829 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38679686 chr14:38679687 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19881 0 0 0 0 0 nucleus 0.438727145735929 0.438720233151917 0.2592954 0 hPsi_site_13605 iPseU_CNN:0.2592954;iRNA_PseU:0 13606 chr15 74000729 74000729 1 + G A rs2291012 74000728 + 74000708 74000748 41 CCTGTGGGTGACCGTGGGGCTGTCTGTCTGTCTCATTGCAC CCTGTGGGTGACCGTGGGGCTATCTGTCTGTCTCATTGCAC < 41bp 0.473246250785823 0.864160718307214 0.25210154 0.62190515 prediction 0.728321436614428 Functional Gain - CD276 ENSG00000103855 CDS Human protein_coding chr15:74000728 chr15:74000729 synonymous SNV . 0 22 hPsi_associated_SNPs_19882 0 0 1 6 2 Ribosome 0.464540505601916 0.472457563448618 0.2438103 0 hPsi_site_13606 iPseU_CNN:0.2438103;iRNA_PseU:0 13607 chr7 30825402 30825402 1 + G A UCEC 30825401 + 30825381 30825421 41 GGAGATGTACTTGGTAATTTTGTATCATCTAAAAGGCCCCC GGAGATGTACTTGGTAATTTTATATCATCTAAAAGGCCCCC < 41bp 0.483233401742482 0.864133968894626 0.38978785 0.5407459 prediction 0.728267937789252 Functional Gain - MINDY4 ENSG00000106125 CDS Human protein_coding chr7:30825401 chr7:30825402 nonsynonymous SNV 0.674 0 22 hPsi_associated_SNPs_19883 0 0 0 0 1 unknown 0.438718114764495 0.438718539321665 0.0814918 0 hPsi_site_13607 iPseU_CNN:0.0814918;iRNA_PseU:0 13608 chr16 4925375 4925375 1 + G A LUSC 4925374 + 4925354 4925394 41 CCAGGGAGTGGCAAAGTTGCTGACCTCGCCGTCCCTAAAGC CCAGGGAGTGGCAAAGTTGCTAACCTCGCCGTCCCTAAAGC < 41bp 0.50934210060012 0.873467243071972 0.44694138 0.72356415 prediction 0.728250284943704 Functional Gain - UBN1 ENSG00000118900 CDS Human protein_coding chr16:4925374 chr16:4925375 synonymous SNV . 0 22 hPsi_associated_SNPs_19884 0 0 1 0 1 Ribosome 0.438718593110922 0.438718592886482 0.4471283 0 hPsi_site_13608 iPseU_CNN:0.4471283;iRNA_PseU:0 13609 chr3 183894823 183894823 1 + G A rs2231214 183894822 + 183894802 183894842 41 CTATAATCACAAGGGGGAGGTGCTCATCTCCCGAGTCTACC CTATAATCACAAGGGGGAGGTACTCATCTCCCGAGTCTACC < 41bp 0.506181986840898 0.87030160876388 0.23847395 0.71835494 prediction 0.728239243845963 Functional Gain - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183894822 chr3:183894823 synonymous SNV . 0 22 hPsi_associated_SNPs_19885 0 0 1 0 1 Ribosome 0.43871859330663 0.438718592995101 0.43670988 0 hPsi_site_13609 iPseU_CNN:0.43670988;iRNA_PseU:0 13610 chr9 100773606 100773606 1 + G A COAD 100773605 + 100773585 100773625 41 GATGGTGAAGAAGAGGAGTTTGATGAAGAAGATGATGAAGA GATGGTGAAGAAGAGGAGTTTAATGAAGAAGATGATGAAGA < 41bp 0.495991125005514 0.864115319803469 0.23830676 0.4819877 prediction 0.728230639606938 Functional Gain - ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773605 chr9:100773606 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19886 0 0 1 0 2 Cytosol 0.43871859297439 0.438718660734731 0 0 hPsi_site_13610 iPseU_CNN:0;iRNA_PseU:0 13611 chr11 18195173 18195173 1 + G A rs61733597 18195172 + 18195152 18195192 41 AGCACCGAGCGCTGCCTGTCTGTTCTGTGGCCCATCTGGTA AGCACCGAGCGCTGCCTGTCTATTCTGTGGCCCATCTGGTA < 41bp 0.493497134720707 0.864110687792249 0.3956513 0.8566313 prediction 0.728221375584498 Functional Gain - MRGPRX4 ENSG00000179817 CDS Human protein_coding chr11:18195172 chr11:18195173 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_19887 0 0 0 0 0 unknown 0.438718588662325 0.438718593157026 0.7132626 0 hPsi_site_13611 iPseU_CNN:0.7132626;iRNA_PseU:0 13612 chr13 44953801 44953801 1 + G A THYM 44953800 + 44953780 44953820 41 CCGCAAGAGGAGAAATATCCTGTGGGACCATGGCTGTTGGC CCGCAAGAGGAGAAATATCCTATGGGACCATGGCTGTTGGC < 41bp 0.476116245383452 0.864097985286592 0.19899458 0.22687021 prediction 0.728195970573184 Functional Gain - SERP2 ENSG00000151778 CDS Human protein_coding chr13:44953800 chr13:44953801 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_19888 0 0 0 2 2 exosome 0.438718584916176 0.43871853404471 0 0 hPsi_site_13612 iPseU_CNN:0;iRNA_PseU:0 13613 chr2 88828850 88828850 1 + G A LAML 88828849 + 88828829 88828869 41 TCCAGAGTGCTGACTTTCCGTGCCTCGTGGATCCCAAACAC TCCAGAGTGCTGACTTTCCGTACCTCGTGGATCCCAAACAC < 41bp 0.484019886307081 0.864092668305357 0.25860843 0.6971117 prediction 0.728185336610714 Functional Gain - TEX37 ENSG00000172073 CDS Human protein_coding chr2:88828849 chr2:88828850 nonsynonymous SNV 0.049 2 22 hPsi_associated_SNPs_19889 0 0 0 0 0 unknown 0.438767433829667 0.438735031227008 0.3942234 0 hPsi_site_13613 iPseU_CNN:0.3942234;iRNA_PseU:0 13614 chr1 229771605 229771605 1 + G A LUSC 229771604 + 229771584 229771624 41 GTTCCGCTGTCTGAAGACTTTGATATCTCTGAATCATTTGA GTTCCGCTGTCTGAAGACTTTAATATCTCTGAATCATTTGA < 41bp 0.503924382910751 0.868011047020995 0.33965254 0.41861153 prediction 0.728173328220488 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771604 chr1:229771605 synonymous SNV . 0 22 hPsi_associated_SNPs_19890 0 0 1 0 0 Nucleus 0.438718748747661 0.438716910938894 0 0 hPsi_site_13614 iPseU_CNN:0;iRNA_PseU:0 13615 chr12 6634802 6634802 1 + G A STAD 6634801 + 6634781 6634821 41 ACCAGCAGTGACCCAGCTGCTGTGGGAGCGGGCCACCGAGA ACCAGCAGTGACCCAGCTGCTATGGGAGCGGGCCACCGAGA < 41bp 0.468234380302688 0.864063773595143 0.32542866 0.3297372 prediction 0.728127547190286 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6634801 chr12:6634802 synonymous SNV . 0 22 hPsi_associated_SNPs_19891 0 0 1 0 2 Nucleus 0.43871526688447 0.438718658490399 0 0 hPsi_site_13615 iPseU_CNN:0;iRNA_PseU:0 13616 chr9 72833294 72833294 1 + C T UCEC 72833295 - 72833275 72833315 41 TGGACAAGAGGCGTGCTTTTTGTCCATACACCATATGGGAG TGGACAAGAGGCGTGCTTTTTATCCATACACCATATGGGAG < 41bp 0.510208509205211 0.874271792439476 0.24084538 0.4258266 prediction 0.728126566468531 Functional Gain - MAMDC2 ENSG00000165072 CDS Human protein_coding chr9:72833295 chr9:72833294 stopgain 0.999 1 22 hPsi_associated_SNPs_19892 0 0 0 0 1 nucleus 0.438691682163674 0.438723759388114 0 0 hPsi_site_13616 iPseU_CNN:0;iRNA_PseU:0 13617 chr17 4635153 4635153 1 + G A COAD 4635152 + 4635132 4635172 41 GGCGGCCTTCACCGCTTCAGTGCAACACGTGGAGGCGGAGC GGCGGCCTTCACCGCTTCAGTACAACACGTGGAGGCGGAGC < 41bp 0.514289341383643 0.878349464066993 0.6654727 0.8701627 prediction 0.728120245366699 Functional Gain - MED11 ENSG00000161920 CDS Human protein_coding chr17:4635152 chr17:4635153 synonymous SNV . 0 22 hPsi_associated_SNPs_19893 0 0 1 0 2 Ribosome 0.438718008343981 0.438692556623354 0.40938 0 hPsi_site_13617 iPseU_CNN:0.40938;iRNA_PseU:0 13618 chr3 184294725 184294725 1 + G A HNSC 184294724 + 184294704 184294744 41 CGGGACCTGGGTGGCCGGGATGACCTCCTGTACAATGTCAT CGGGACCTGGGTGGCCGGGATAACCTCCTGTACAATGTCAT < 41bp 0.48207491097175 0.864051251059907 0.5190463 0.7881955 prediction 0.728102502119813 Functional Gain - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184294724 chr3:184294725 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_19894 0 0 0 0 1 Endoplasmic reticulum 0.438706310382641 0.43871859288503 0.5382984 0 hPsi_site_13618 iPseU_CNN:0.5382984;iRNA_PseU:0 13619 chr3 129007700 129007700 1 + G A COAD 129007699 + 129007679 129007719 41 ATCTTCTCTCCGTGGCAGGATGCAGACTCATCTGAGCGTAT ATCTTCTCTCCGTGGCAGGATACAGACTCATCTGAGCGTAT < 41bp 0.512487373830577 0.876529934047228 0.4961313 0.6976991 prediction 0.728085120433301 Functional Gain - HMCES ENSG00000183624 CDS Human protein_coding chr3:129007699 chr3:129007700 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_19895 0 0 1 0 1 Ribosome 0.43872057500142 0.43871313298353 0.3953982 0 hPsi_site_13619 iPseU_CNN:0.3953982;iRNA_PseU:0 13620 chr7 44802946 44802946 1 + G A SARC 44802945 + 44802925 44802965 41 GACAGCTATCAAGGTGTCCCTGAAGTGCCCCATCACCTTCC GACAGCTATCAAGGTGTCCCTAAAGTGCCCCATCACCTTCC < 41bp 0.471237544426047 0.864036487355343 0.20436198 0.29157993 prediction 0.728072974710685 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802945 chr7:44802946 synonymous SNV . 0 22 hPsi_associated_SNPs_19896 0 0 1 0 2 Cytosol 0.438737580433688 0.438725130908401 0 0 hPsi_site_13620 iPseU_CNN:0;iRNA_PseU:0 13621 chr17 18226109 18226109 1 + G A UCEC 18226108 + 18226088 18226128 41 GGCAGCACCTACTACCTGCATGTCCAGAGCATGCTCACCCA GGCAGCACCTACTACCTGCATATCCAGAGCATGCTCACCCA < 41bp 0.494339597057194 0.864030231102137 0.22650364 0.35259253 prediction 0.728060462204275 Functional Gain - SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18226108 chr17:18226109 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_19897 0 0 1 0 0 chromatin 0.438730388710349 0.43872376088124 0 0 hPsi_site_13621 iPseU_CNN:0;iRNA_PseU:0 13622 chr1 32742050 32742050 1 + G A SARC 32742049 + 32742029 32742069 41 CAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGGGGCTGGAC CAGGGAGACGCTGAAGCTGGTAGAGCGGCTGGGGGCTGGAC < 41bp 0.484287953820535 0.8640289966981 0.2800107 0.5617376 prediction 0.728057993396201 Functional Gain - LCK ENSG00000182866 CDS Human protein_coding chr1:32742049 chr1:32742050 synonymous SNV . 0 22 hPsi_associated_SNPs_19898 0 0 0 0 1 Cytosol 0.438471176681229 0.4387186022334 0.1234752 0 hPsi_site_13622 iPseU_CNN:0.1234752;iRNA_PseU:0 13623 chr19 804855 804855 1 + G A CESC 804854 + 804834 804874 41 CTCCAAGTTCGGCACAGTGTTGAAGATCATCACCTTCACCA CTCCAAGTTCGGCACAGTGTTAAAGATCATCACCTTCACCA < 41bp 0.524259306660423 0.888280271628632 0.37023327 0.738166 prediction 0.728041929936418 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804854 chr19:804855 synonymous SNV . 0 22 hPsi_associated_SNPs_19899 0 0 1 2 1 Cytosol 0.438969970628464 0.438865822514807 0.476332 0 hPsi_site_13623 iPseU_CNN:0.476332;iRNA_PseU:0 13624 chr5 434446 434446 1 + G A UCEC 434445 + 434425 434465 41 GGTCCGACGCTGCTGCTAGATGTGTCCATCAAGATGGAGAA GGTCCGACGCTGCTGCTAGATATGTCCATCAAGATGGAGAA < 41bp 0.514059519767771 0.878058846022675 0.31842604 0.6090051 prediction 0.727998652509808 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:434445 chr5:434446 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_19900 0 0 0 0 0 chromatin 0.438706796186988 0.438718504342583 0.2180102 0 hPsi_site_13624 iPseU_CNN:0.2180102;iRNA_PseU:0 13625 chr22 46712036 46712036 1 + G A UCEC 46712035 + 46712015 46712055 41 ATGCTGCGGCCAGCTCTGCCTGCAGGCCCTGTGGGGGCATC ATGCTGCGGCCAGCTCTGCCTACAGGCCCTGTGGGGGCATC < 41bp 0.483314044308382 0.863990400970793 0.43625873 0.5651646 prediction 0.727980801941586 Functional Gain - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46712035 chr22:46712036 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_19901 0 0 0 0 0 Ribosome 0.438717877968296 0.438718271817781 0.1303292 0 hPsi_site_13625 iPseU_CNN:0.1303292;iRNA_PseU:0 13626 chr20 44571828 44571828 1 + G A BLCA 44571827 + 44571807 44571847 41 CCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTC CCCCTGTTGCCCAGCAACTGTAAACCAGTCGTGTCACCTTC < 41bp 0.473316181465589 0.86398172316404 0.29251105 0.41077444 prediction 0.72796344632808 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571827 chr20:44571828 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19902 0 0 1 0 2 chromatin 0.434476056253339 0.438606093984226 0 0 hPsi_site_13626 iPseU_CNN:0;iRNA_PseU:0 13627 chr19 30313174 30313174 1 + G A LGG 30313173 + 30313153 30313193 41 GATCTCTGTGTCCTGGATGTTGACTGCCTTGAATTTCCTTA GATCTCTGTGTCCTGGATGTTAACTGCCTTGAATTTCCTTA < 41bp 0.519967584317235 0.883936106561801 0.25950015 0.45034164 prediction 0.727937044489132 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313173 chr19:30313174 nonsynonymous SNV 0.938 1 22 hPsi_associated_SNPs_19903 0 0 1 0 2 Ribosome 0.438717302504683 0.438718024334312 0 0 hPsi_site_13627 iPseU_CNN:0;iRNA_PseU:0 13628 chr2 131520596 131520596 1 + G A UCEC 131520595 + 131520575 131520615 41 GGACAGTGTGAATCGCTCAGTGCGTCAGCAGCAGCGTGCCC GGACAGTGTGAATCGCTCAGTACGTCAGCAGCAGCGTGCCC < 41bp 0.475147647895303 0.86395888423016 0.39132366 0.7889722 prediction 0.72791776846032 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131520595 chr2:131520596 synonymous SNV . 0 22 hPsi_associated_SNPs_19904 0 0 0 0 0 Nucleus 0.437522121613571 0.447734058445315 0.5779444 0 hPsi_site_13628 iPseU_CNN:0.5779444;iRNA_PseU:0 13629 chr8 135612690 135612690 1 + G A SKCM 135612689 + 135612669 135612709 41 TGCTACTTACCAGTGCTGTGTGAACTTTAAGATGTGCCTGT TGCTACTTACCAGTGCTGTGTAAACTTTAAGATGTGCCTGT < 41bp 0.493149078117395 0.863953646766406 0.23843732 0.32525635 prediction 0.727907293532812 Functional Gain - ZFAT ENSG00000066827 CDS Human protein_coding chr8:135612689 chr8:135612690 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_19905 0 0 0 3 0 chromatin 0.438507762056192 0.438326189267268 0 0 hPsi_site_13629 iPseU_CNN:0;iRNA_PseU:0 13630 chr1 156878777 156878777 1 + G A SKCM 156878776 + 156878756 156878796 41 TGTTCTGCACGCTGCTCATGTGAAAATGCCATCGCCTGCTC TGTTCTGCACGCTGCTCATGTAAAAATGCCATCGCCTGCTC < 41bp 0.521158548329073 0.885110065062233 0.20939332 0.28547308 prediction 0.727903033466321 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156878776 chr1:156878777 nonsynonymous SNV 0.754 0 22 hPsi_associated_SNPs_19906 0 0 0 0 1 cytosol 0.442061534025722 0.429000751199818 0 0 hPsi_site_13630 iPseU_CNN:0;iRNA_PseU:0 13631 chr17 7386113 7386113 1 + G A CESC 7386112 + 7386092 7386132 41 CTTGGTCTCCTTCACATGTGTGAGCTATGCGGTCACCAAGG CTTGGTCTCCTTCACATGTGTAAGCTATGCGGTCACCAAGG < 41bp 0.502861484310333 0.866791170726368 0.27404118 0.6478527 prediction 0.727859372832071 Functional Gain - SLC35G6 ENSG00000259224 CDS Human protein_coding chr17:7386112 chr17:7386113 synonymous SNV . 0 22 hPsi_associated_SNPs_19907 0 0 0 0 0 exosome 0.439023256929131 0.439033581875897 0.2957054 0 hPsi_site_13631 iPseU_CNN:0.2957054;iRNA_PseU:0 13632 chr2 233546325 233546325 1 + G A SKCM 233546324 + 233546304 233546344 41 TTGTCATCGGCCAGTAAGTTTGAAGCAGAGTTGAAAGCTGA TTGTCATCGGCCAGTAAGTTTAAAGCAGAGTTGAAAGCTGA < 41bp 0.499022367219835 0.863926774711434 0.31560528 0.49484006 prediction 0.727853549422868 Functional Gain - EFHD1 ENSG00000115468 CDS Human protein_coding chr2:233546324 chr2:233546325 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_19908 0 0 1 0 1 exosome 0.438718592995091 0.438718540614998 0 0 hPsi_site_13632 iPseU_CNN:0;iRNA_PseU:0 13633 chr12 6645892 6645892 1 + G A ESCA 6645891 + 6645871 6645911 41 TCCACCCATGGCAAATTCCATGGCACCGTCAAGGCTGAGAA TCCACCCATGGCAAATTCCATAGCACCGTCAAGGCTGAGAA < 41bp 0.495317328639276 0.863925990537473 0.18009335 0.22254261 prediction 0.727851981074947 Functional Gain - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6645891 chr12:6645892 nonsynonymous SNV 0.966 2 22 hPsi_associated_SNPs_19909 0 0 1 0 2 Ribosome 0.438718587008997 0.438468631667812 0 0 hPsi_site_13633 iPseU_CNN:0;iRNA_PseU:0 13634 chr4 96761664 96761664 1 + G A LUSC 96761663 + 96761643 96761683 41 ATCCTATAGGGCTCATGGTGTGTGCTATACTCGGGGACTTT ATCCTATAGGGCTCATGGTGTATGCTATACTCGGGGACTTT < 41bp 0.500618021846582 0.864536574204116 0.56063366 0.47904155 prediction 0.727837104715067 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761663 chr4:96761664 synonymous SNV . 0 22 hPsi_associated_SNPs_19910 0 0 0 0 0 unknown 0.438718574590964 0.438718587949936 0 0 hPsi_site_13634 iPseU_CNN:0;iRNA_PseU:0 13635 chr16 19126497 19126497 1 + G A SKCM 19126496 + 19126476 19126516 41 CTTTGCTGATGCCTTCTGCGTGGATGTGCGCGGGCGGCGTC CTTTGCTGATGCCTTCTGCGTAGATGTGCGCGGGCGGCGTC < 41bp 0.502477182696513 0.86638097234218 0.35264063 0.63364553 prediction 0.727807579291335 Functional Gain - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19126496 chr16:19126497 synonymous SNV . 0 22 hPsi_associated_SNPs_19911 0 0 1 0 0 Ribosome 0.438718581393506 0.438941046258871 0.26729106 0 hPsi_site_13635 iPseU_CNN:0.26729106;iRNA_PseU:0 13636 chr18 9887098 9887098 1 + G A COAD 9887097 + 9887077 9887117 41 GCCATCCAGCCCAAAGAGGGTGACATCCCCAAGTCCTCAGC GCCATCCAGCCCAAAGAGGGTAACATCCCCAAGTCCTCAGC < 41bp 0.490911371864903 0.863890812914543 0.34031802 0.65473783 prediction 0.727781625829086 Functional Gain - TXNDC2 ENSG00000168454 CDS Human protein_coding chr18:9887097 chr18:9887098 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19912 0 0 0 0 0 exosome 0.438748794556673 0.438718575222567 0.30947566 0 hPsi_site_13636 iPseU_CNN:0.30947566;iRNA_PseU:0 13637 chr11 67378879 67378879 1 + G A UCEC 67378878 + 67378858 67378898 41 CGACTTGGGGCCCCAGGGGGTGTCACGGGCGGCTGGGACAA CGACTTGGGGCCCCAGGGGGTATCACGGGCGGCTGGGACAA < 41bp 0.480531958567126 0.863879517901944 0.26289195 0.57451576 prediction 0.727759035803887 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378878 chr11:67378879 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19913 0 0 1 0 1 Ribosome 0.438718593385178 0.43871859640452 0.14903152 0 hPsi_site_13637 iPseU_CNN:0.14903152;iRNA_PseU:0 13638 chr11 43471696 43471696 1 + G A LUAD 43471695 + 43471675 43471715 41 GCAATGGAGCCTCTTTGCAATGGCAATCTCCCCACGAGTAT GCAATGGAGCCTCTTTGCAATAGCAATCTCCCCACGAGTAT < 41bp 0.478373454918416 0.863866134331965 0.24356228 0.30402666 prediction 0.72773226866393 Functional Gain - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43471695 chr11:43471696 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_19914 0 0 1 0 2 Nucleus 0.438718595249263 0.438718254801236 0 0 hPsi_site_13638 iPseU_CNN:0;iRNA_PseU:0 13639 chr19 48789682 48789682 1 + G A UCEC 48789681 + 48789661 48789701 41 CTCAATTCACGCCATGCAGATGCAGTTGTATACCGCAGAGA CTCAATTCACGCCATGCAGATACAGTTGTATACCGCAGAGA < 41bp 0.510255038934625 0.874089997711089 0.29880032 0.64551383 prediction 0.727669917552928 Functional Gain - ZNF114 ENSG00000178150 CDS Human protein_coding chr19:48789681 chr19:48789682 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_19915 0 0 0 0 0 chromatin 0.445380062214948 0.444654382047963 0.29102766 0 hPsi_site_13639 iPseU_CNN:0.29102766;iRNA_PseU:0 13640 chr1 156552943 156552943 1 + G A UCEC 156552942 + 156552922 156552962 41 AGACAACTACCTGCATGCCCTGCAGGCTGCCCGGGACTCTG AGACAACTACCTGCATGCCCTACAGGCTGCCCGGGACTCTG < 41bp 0.490144331054102 0.863832899676667 0.22520655 0.29372627 prediction 0.727665799353333 Functional Gain - TTC24 ENSG00000187862 CDS Human protein_coding chr1:156552942 chr1:156552943 synonymous SNV . 0 22 hPsi_associated_SNPs_19916 0 0 0 0 1 exosome 0.438724503873734 0.438718905880455 0 0 hPsi_site_13640 iPseU_CNN:0;iRNA_PseU:0 13641 chr8 11629067 11629067 1 + G A UCEC 11629066 + 11629046 11629086 41 GAAGCTACAGCCCGCCAGCCTGCAGTCTCTGTGGCTCCAGG GAAGCTACAGCCCGCCAGCCTACAGTCTCTGTGGCTCCAGG < 41bp 0.4820679364703 0.863826781258713 0.36552006 0.4038106 prediction 0.727653562517425 Functional Gain - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11629066 chr8:11629067 synonymous SNV . 0 22 hPsi_associated_SNPs_19917 0 0 0 0 2 Ribosome 0.43871867576241 0.43871860946891 0 0 hPsi_site_13641 iPseU_CNN:0;iRNA_PseU:0 13642 chr6 35438389 35438389 1 + G A BLCA 35438388 + 35438368 35438408 41 GGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGAGC GGCTGTAGCTGTTGGTCACGTAAAGATGACAGACGATGAGC < 41bp 0.49445174939157 0.863819504089156 0.11247891 0.23207033 prediction 0.727639008178313 Functional Gain - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438388 chr6:35438389 synonymous SNV . 0 22 hPsi_associated_SNPs_19918 0 0 1 0 1 Cytosol 0.440799460620666 0.429441835609604 0 0 hPsi_site_13642 iPseU_CNN:0;iRNA_PseU:0 13643 chr8 144461593 144461593 1 + G A READ 144461592 + 144461572 144461612 41 TGATGGCCCAGGCCCAGGAATGTGTGTTTGAGGGCCTCTCA TGATGGCCCAGGCCCAGGAATATGTGTTTGAGGGCCTCTCA < 41bp 0.511478136020398 0.875295934761356 0.519179 0.64548254 prediction 0.727635597481917 Functional Gain - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144461592 chr8:144461593 nonsynonymous SNV 0.897 4 22 hPsi_associated_SNPs_19919 0 0 0 0 1 Ribosome 0.438719622174251 0.438718676156429 0.25260708 0 hPsi_site_13643 iPseU_CNN:0.25260708;iRNA_PseU:0 13644 chr1 153745435 153745435 1 + G A LUSC 153745434 + 153745414 153745454 41 TTCTCCCTGGCGGAGGAATATGAGGACTCTTCCACCAAGCC TTCTCCCTGGCGGAGGAATATAAGGACTCTTCCACCAAGCC < 41bp 0.510956918724885 0.874770425293934 0.22452304 0.24333885 prediction 0.727627013138097 Functional Gain - INTS3 ENSG00000143624 CDS Human protein_coding chr1:153745434 chr1:153745435 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19920 0 0 1 0 1 chromatin 0.438718592995102 0.438718592995105 0 0 hPsi_site_13644 iPseU_CNN:0;iRNA_PseU:0 13645 chr16 599309 599309 1 + G A PAAD 599308 + 599288 599328 41 GTTCCTGAGCGCCCTGGCGGTGCTGGCGGAGCGGCCGGACC GTTCCTGAGCGCCCTGGCGGTACTGGCGGAGCGGCCGGACC < 41bp 0.482063777539159 0.863811728069192 0.2912157 0.7431201 prediction 0.727623456138385 Functional Gain - CAPN15 ENSG00000103326 CDS Human protein_coding chr16:599308 chr16:599309 synonymous SNV . 0 22 hPsi_associated_SNPs_19921 0 0 1 0 1 chromatin 0.434993987231201 0.438551607437466 0.4862402 0 hPsi_site_13645 iPseU_CNN:0.4862402;iRNA_PseU:0 13646 chr2 97217381 97217381 1 + G A LUSC 97217380 + 97217360 97217400 41 ACTTAAAGATGGGGTGCTATTGGGGCCTCCTGGCAAAGAGG ACTTAAAGATGGGGTGCTATTAGGGCCTCCTGGCAAAGAGG < 41bp 0.481887942672215 0.863791877433698 0.24537638 0.5319224 prediction 0.727583754867395 Functional Gain - ARID5A ENSG00000196843 CDS Human protein_coding chr2:97217380 chr2:97217381 synonymous SNV . 0 22 hPsi_associated_SNPs_19922 0 0 0 0 0 Cytosol 0.438718592996878 0.438718592995129 0.0638448 0 hPsi_site_13646 iPseU_CNN:0.0638448;iRNA_PseU:0 13647 chr6 43034061 43034061 1 + G A TGCT 43034060 + 43034040 43034080 41 TTAGTGTCCCGTGGTCAAGGTGCTACAGCAGCTCAGCAGGG TTAGTGTCCCGTGGTCAAGGTACTACAGCAGCTCAGCAGGG < 41bp 0.515390293657592 0.87917771674683 0.26526663 0.7335074 prediction 0.727574846178477 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43034060 chr6:43034061 nonsynonymous SNV 0.819 0 22 hPsi_associated_SNPs_19923 0 0 1 0 0 Cytosol 0.438718592990031 0.438718592682268 0.4670148 0 hPsi_site_13647 iPseU_CNN:0.4670148;iRNA_PseU:0 13648 chr12 64813912 64813912 1 + G A HNSC 64813911 + 64813891 64813931 41 ACAGTGCATTCCAAATCTGGTGGAATCATGGTACCAAATAT ACAGTGCATTCCAAATCTGGTAGAATCATGGTACCAAATAT < 41bp 0.499257441512521 0.863778186234027 0.2736142 0.39937714 prediction 0.727556372468054 Functional Gain - XPOT ENSG00000184575 CDS Human protein_coding chr12:64813911 chr12:64813912 synonymous SNV . 0 22 hPsi_associated_SNPs_19924 0 0 1 0 1 Ribosome 0.438718575480932 0.438715244962509 0 0 hPsi_site_13648 iPseU_CNN:0;iRNA_PseU:0 13649 chr3 49050477 49050477 1 + G A BLCA 49050476 + 49050456 49050496 41 AGTGCCTTCCTACCCCCAGGTGACTTCCTGGTGTGTGGTGA AGTGCCTTCCTACCCCCAGGTAACTTCCTGGTGTGTGGTGA < 41bp 0.479574211529709 0.863777181721904 0.2317765 0.61888784 prediction 0.727554363443808 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050476 chr3:49050477 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_19925 0 0 1 0 2 Nucleus 0.438718592995102 0.438718592995102 0.23777568 0 hPsi_site_13649 iPseU_CNN:0.23777568;iRNA_PseU:0 13650 chr17 39412056 39412056 1 + G A OV 39412055 + 39412035 39412075 41 CCAGCTGCTGCCAGCCCTGCTGCCGCCCCGCCTGCTGTGAG CCAGCTGCTGCCAGCCCTGCTACCGCCCCGCCTGCTGTGAG < 41bp 0.501782650585058 0.865558216650997 0.27381352 0.67454416 prediction 0.727551132131878 Functional Gain - KRTAP9-9 ENSG00000198083 CDS Human protein_coding chr17:39412055 chr17:39412056 nonsynonymous SNV 0.499 1 22 hPsi_associated_SNPs_19926 0 0 0 0 0 unknown 0.438718598153945 0.438716715353464 0.34908832 0 hPsi_site_13650 iPseU_CNN:0.34908832;iRNA_PseU:0 13651 chr5 140590255 140590255 1 + G A SKCM 140590254 + 140590234 140590274 41 GGTGACCAAGGTGGTGGCGGTGGACGGTGACTCGGGCCAGA GGTGACCAAGGTGGTGGCGGTAGACGGTGACTCGGGCCAGA < 41bp 0.495746114848066 0.863761573958961 0.29649818 0.758899 prediction 0.727523147917921 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140590254 chr5:140590255 synonymous SNV . 0 22 hPsi_associated_SNPs_19927 0 0 0 0 0 exosome 0.438718592982078 0.438618129226579 0.517798 0 hPsi_site_13651 iPseU_CNN:0.517798;iRNA_PseU:0 13652 chr10 121436267 121436267 1 + G A UCEC 121436266 + 121436246 121436286 41 GAGAGGGCAGCCCCCAGCACTGCCCCTGCAGAAGCTACACC GAGAGGGCAGCCCCCAGCACTACCCCTGCAGAAGCTACACC < 41bp 0.479389804445813 0.863752700295389 0.19696373 0.32998914 prediction 0.727505400590778 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436266 chr10:121436267 nonsynonymous SNV 0.981 0 22 hPsi_associated_SNPs_19928 1 0 0 0 0 Nucleus 0.438720742263354 0.438718999719522 0 0 hPsi_site_13652 iPseU_CNN:0;iRNA_PseU:0 13653 chr19 19153677 19153677 1 + G A HNSC 19153676 + 19153656 19153696 41 AAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGTAGGGTGGT AAAGAGGCCGTGGAGCAGTTTAAATCGCAAGGTAGGGTGGT < 41bp 0.484077275516281 0.863745851078952 0.30117983 0.824706 prediction 0.727491702157903 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19153676 chr19:19153677 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19929 0 0 1 0 1 Ribosome 0.438603835924212 0.438725125907577 0.649412 0 hPsi_site_13653 iPseU_CNN:0.649412;iRNA_PseU:0 13654 chr9 132631681 132631681 1 + G A UCEC 132631680 + 132631660 132631700 41 GACGGCTCCATTCTCAGCCTTGTGCAGTGTCTCACCTGTGA GACGGCTCCATTCTCAGCCTTATGCAGTGTCTCACCTGTGA < 41bp 0.470759381364653 0.863742821865778 0.3334553 0.45815343 prediction 0.727485643731556 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132631680 chr9:132631681 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_19930 0 0 1 0 2 chromatin 0.439338329223644 0.439329859844796 0 0 hPsi_site_13654 iPseU_CNN:0;iRNA_PseU:0 13655 chr17 31324782 31324782 1 + G A rs142148066 31324781 + 31324761 31324801 41 GACCTCACTGAATGGGTGGATGGCTGTGACTTCTAGGATGG GACCTCACTGAATGGGTGGATAGCTGTGACTTCTAGGATGG < 41bp 0.494341606606184 0.863739081524219 0.1608367 0.18418667 prediction 0.727478163048437 Functional Gain - SPACA3 ENSG00000141316 CDS Human protein_coding chr17:31324781 chr17:31324782 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19931 0 0 0 1 1 unknown 0.438711029554138 0.43871859336308 0 0 hPsi_site_13655 iPseU_CNN:0;iRNA_PseU:0 13656 chr22 31655196 31655196 1 + G A rs55638065 31655195 + 31655175 31655215 41 TGGGGATGCATATGCACTGGTGCAGCATGCCACCCTCTACT TGGGGATGCATATGCACTGGTACAGCATGCCACCCTCTACT < 41bp 0.481121818443461 0.863734597982381 0.19414309 0.3441593 prediction 0.727469195964762 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31655195 chr22:31655196 synonymous SNV . 0 22 hPsi_associated_SNPs_19932 0 0 1 0 2 Cytosol 0.438718593052126 0.43871859299806 0 0 hPsi_site_13656 iPseU_CNN:0;iRNA_PseU:0 13657 chr11 46389268 46389268 1 + G A KIRC 46389267 + 46389247 46389287 41 TCCGGGGACTTCTGCTACGTTGGGGAGCAGTACTGTGTAGC TCCGGGGACTTCTGCTACGTTAGGGAGCAGTACTGTGTAGC < 41bp 0.485585869057557 0.863729306655878 0.22064829 0.39947802 prediction 0.727458613311756 Functional Gain - DGKZ ENSG00000149091 CDS Human protein_coding chr11:46389267 chr11:46389268 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_19933 0 0 1 0 3 Ribosome 0.438712302497906 0.438687928831203 0 0 hPsi_site_13657 iPseU_CNN:0;iRNA_PseU:0 13658 chr7 100192819 100192819 1 + G A UCEC 100192818 + 100192798 100192838 41 TGACCCCCTGGACCAGCAGATGCCGCTTGCTCTCTCACTGC TGACCCCCTGGACCAGCAGATACCGCTTGCTCTCTCACTGC < 41bp 0.477138608341574 0.863715001807231 0.24453735 0.49664167 prediction 0.727430003614463 Functional Gain - FBXO24 ENSG00000106336 CDS Human protein_coding chr7:100192818 chr7:100192819 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19934 0 0 0 0 2 exosome 0.432883337892897 0.42789840134695 0 0 hPsi_site_13658 iPseU_CNN:0;iRNA_PseU:0 13659 chrX 30269282 30269282 1 + G A HNSC 30269281 + 30269261 30269301 41 GGAAGAGATCTGGAAATTCATGAATGTGTTGGGAGCCTATG GGAAGAGATCTGGAAATTCATAAATGTGTTGGGAGCCTATG < 41bp 0.495374667638576 0.863700084476334 0.23463672 0.25387308 prediction 0.727400168952667 Functional Gain - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30269281 chrX:30269282 nonsynonymous SNV 0.678 2 22 hPsi_associated_SNPs_19935 0 0 0 0 0 nucleolus 0.438720531927909 0.438718593042373 0 0 hPsi_site_13659 iPseU_CNN:0;iRNA_PseU:0 13660 chr20 62658958 62658958 1 + G A LUSC 62658957 + 62658937 62658977 41 TCTTACTTGTTGGTTGCAGTTGAAGAAGTGTCCCCACTCCA TCTTACTTGTTGGTTGCAGTTAAAGAAGTGTCCCCACTCCA < 41bp 0.515277611453931 0.878975560548316 0.51058793 0.77969444 prediction 0.727395898188769 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62658957 chr20:62658958 synonymous SNV . 0 22 hPsi_associated_SNPs_19936 0 0 0 0 1 Cytosol 0.436919852271471 0.438717858805874 0.53821302 0 hPsi_site_13660 iPseU_CNN:0.53821302;iRNA_PseU:0 13661 chr10 105037734 105037734 1 + G A UCEC 105037733 + 105037713 105037753 41 GCGGCCGAGGTGGACGTGACTGTGGCTAAACCAGACCTGAC GCGGCCGAGGTGGACGTGACTATGGCTAAACCAGACCTGAC < 41bp 0.484320977515597 0.863693651899847 0.5447373 0.83440316 prediction 0.727387303799695 Functional Gain - INA ENSG00000148798 CDS Human protein_coding chr10:105037733 chr10:105037734 nonsynonymous SNV 0.959 3 22 hPsi_associated_SNPs_19937 0 0 1 0 0 exosome 0.43870898484467 0.438652663259269 0.57933172 0 hPsi_site_13661 iPseU_CNN:0.57933172;iRNA_PseU:0 13662 chr15 72958345 72958345 1 + G A UCEC 72958344 + 72958324 72958364 41 GCTGGAGCTGCAAGAGTTGGTGTTGCCCCTTGTGGGCAACC GCTGGAGCTGCAAGAGTTGGTATTGCCCCTTGTGGGCAACC < 41bp 0.51676163957783 0.880448973543199 0.4023512 0.71961457 prediction 0.727374667930738 Functional Gain - GOLGA6B ENSG00000215186 CDS Human protein_coding chr15:72958344 chr15:72958345 synonymous SNV . 0 22 hPsi_associated_SNPs_19938 0 0 0 0 1 exosome 0.438718594420862 0.438718592989111 0.43922914 0 hPsi_site_13662 iPseU_CNN:0.43922914;iRNA_PseU:0 13663 chr12 49948266 49948266 1 + G A COAD 49948265 + 49948245 49948285 41 CTTGCGCTGTACCCCGAGTTTGCCCCGCGCTTCAGTCGTGG CTTGCGCTGTACCCCGAGTTTACCCCGCGCTTCAGTCGTGG < 41bp 0.512093379772705 0.875764648283893 0.5387632 0.79402465 prediction 0.727342537022376 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49948265 chr12:49948266 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_19939 0 0 0 0 1 chromatin 0.438711933989066 0.438632957271062 0.5105229 0 hPsi_site_13663 iPseU_CNN:0.5105229;iRNA_PseU:0 13664 chr10 74987877 74987877 1 + G A UCEC 74987876 + 74987856 74987896 41 GAAAGTTCCTGTGTGCTGAGTGAACTACATCCTTTGGTGTT GAAAGTTCCTGTGTGCTGAGTAAACTACATCCTTTGGTGTT < 41bp 0.479224256224957 0.86366522940891 0.26943544 0.5663017 prediction 0.72733045881782 Functional Gain - FAM149B1 ENSG00000138286 CDS Human protein_coding chr10:74987876 chr10:74987877 nonsynonymous SNV 0.966 3 22 hPsi_associated_SNPs_19940 0 0 1 0 3 Ribosome 0.438752199478869 0.438718740944767 0.1326034 0 hPsi_site_13664 iPseU_CNN:0.1326034;iRNA_PseU:0 13665 chr14 75230867 75230867 1 + G A LUAD 75230866 + 75230846 75230886 41 GAGCCATTCCCAGTCCTACTTGCCCTCTTCTCAGGCATCTC GAGCCATTCCCAGTCCTACTTACCCTCTTCTCAGGCATCTC < 41bp 0.506062794651168 0.86972460111471 0.17250922 0.3715387 prediction 0.727323612927085 Functional Gain - YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75230866 chr14:75230867 synonymous SNV . 0 22 hPsi_associated_SNPs_19941 0 0 1 0 0 Cytosol 0.438718595899196 0.438721348028754 0 0 hPsi_site_13665 iPseU_CNN:0;iRNA_PseU:0 13666 chr7 100463561 100463561 1 + G A HNSC 100463560 + 100463540 100463580 41 GGTGGCCGACGCCCTCAAGATGAACAAGAATGTGGTGCTGG GGTGGCCGACGCCCTCAAGATAAACAAGAATGTGGTGCTGG < 41bp 0.490929010519544 0.863658630910406 0.2764836 0.42628285 prediction 0.727317261820811 Functional Gain - SLC12A9 ENSG00000146828 CDS Human protein_coding chr7:100463560 chr7:100463561 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_19942 0 0 0 0 0 Cytosol 0.438718666930365 0.438719796519111 0 0 hPsi_site_13666 iPseU_CNN:0;iRNA_PseU:0 13667 chr14 67843249 67843249 1 + G A BLCA 67843248 + 67843228 67843268 41 CAGAGGACTGCCTGGGTCTTTGATGACAAGTACAAGAGACC CAGAGGACTGCCTGGGTCTTTAATGACAAGTACAAGAGACC < 41bp 0.486892551603498 0.863655488599094 0.18924493 0.26961455 prediction 0.727310977198189 Functional Gain - EIF2S1 ENSG00000134001 CDS Human protein_coding chr14:67843248 chr14:67843249 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19943 0 0 1 0 2 Cytosol 0.438719304306897 0.438718592735252 0 0 hPsi_site_13667 iPseU_CNN:0;iRNA_PseU:0 13668 chr12 108620920 108620920 1 + G A DLBC 108620919 + 108620899 108620939 41 GGGACTCCTAGTTACTTCATTGTGTACCAGACACAAGTCCA GGGACTCCTAGTTACTTCATTATGTACCAGACACAAGTCCA < 41bp 0.517014803142756 0.880669592045126 0.28719258 0.35524496 prediction 0.72730957780474 Functional Gain - WSCD2 ENSG00000075035 CDS Human protein_coding chr12:108620919 chr12:108620920 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19944 0 0 0 0 1 Endoplasmic reticulum 0.438683537739284 0.438715973489541 0 0 hPsi_site_13668 iPseU_CNN:0;iRNA_PseU:0 13669 chr10 115344005 115344005 1 + G A BLCA 115344004 + 115343984 115344024 41 GGGTCCTTTCCCTCTGGGAGTGAGTGCCACATCTCTGGCTG GGGTCCTTTCCCTCTGGGAGTAAGTGCCACATCTCTGGCTG < 41bp 0.477739886677506 0.86365116165868 0.187556 0.2403234 prediction 0.72730232331736 Functional Gain - HABP2 ENSG00000148702 CDS Human protein_coding chr10:115344004 chr10:115344005 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_19945 0 0 0 0 1 exosome 0.438720319872337 0.446735818987578 0 0 hPsi_site_13669 iPseU_CNN:0;iRNA_PseU:0 13670 chr5 141019572 141019572 1 + G A SKCM 141019571 + 141019551 141019591 41 GACAGGAGCTGGGGCTCTGGTGGGGGACAGGACCCAGGGGG GACAGGAGCTGGGGCTCTGGTAGGGGACAGGACCCAGGGGG < 41bp 0.514822891571133 0.878470064061025 0.24396828 0.34178168 prediction 0.727294344979783 Functional Gain - RELL2 ENSG00000164620 CDS Human protein_coding chr5:141019571 chr5:141019572 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_19946 0 0 0 0 1 chromatin 0.438718564563265 0.438718592995101 0 0 hPsi_site_13670 iPseU_CNN:0;iRNA_PseU:0 13671 chr12 8926185 8926185 1 + G A OV 8926184 + 8926164 8926204 41 TATGTCCCTGCTCTCCGTGGTGTCCACTGCCAGTGAGACTA TATGTCCCTGCTCTCCGTGGTATCCACTGCCAGTGAGACTA < 41bp 0.487701209151153 0.863642611165106 0.31054348 0.7107132 prediction 0.727285222330212 Functional Gain - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926184 chr12:8926185 synonymous SNV . 0 22 hPsi_associated_SNPs_19947 0 0 1 0 0 chromatin 0.4387256794663 0.438718728683142 0.4214264 0 hPsi_site_13671 iPseU_CNN:0.4214264;iRNA_PseU:0 13672 chr7 150732745 150732745 1 + G A BLCA 150732744 + 150732724 150732764 41 GACACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCC GACACGCCTCACGCTGCTGCTAATGGTGGCCACACCAGCCC < 41bp 0.519040268636603 0.882677309775026 0.20545661 0.27899325 prediction 0.727274082276845 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150732744 chr7:150732745 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_19948 0 0 1 0 2 Ribosome 0.433284389745134 0.439630228250312 0 0 hPsi_site_13672 iPseU_CNN:0;iRNA_PseU:0 13673 chr15 72432133 72432133 1 + G A BRCA 72432132 + 72432112 72432152 41 CACGTCAGTTTCATCAGCCCTGAAGTCACCCAGTTCATCAA CACGTCAGTTTCATCAGCCCTAAAGTCACCCAGTTCATCAA < 41bp 0.50893793360225 0.872563426652092 0.27677274 0.3241731 prediction 0.727250986099683 Functional Gain - SENP8 ENSG00000166192 CDS Human protein_coding chr15:72432132 chr15:72432133 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_19949 0 0 0 0 0 Cytosol 0.438718592928842 0.438718578743457 0 0 hPsi_site_13673 iPseU_CNN:0;iRNA_PseU:0 13674 chr7 96637044 96637044 1 + G A LUAD 96637043 + 96637023 96637063 41 TCGGACCATTTATTCCAGCCTGCAGCTCCAGGCTTTAAACC TCGGACCATTTATTCCAGCCTACAGCTCCAGGCTTTAAACC < 41bp 0.506241363535774 0.869866783534792 0.21718103 0.34175447 prediction 0.727250839998036 Functional Gain - DLX6 ENSG00000006377 CDS Human protein_coding chr7:96637043 chr7:96637044 synonymous SNV . 0 22 hPsi_associated_SNPs_19950 0 0 0 0 2 cytosol 0.438718592995097 0.438718592995102 0 0 hPsi_site_13674 iPseU_CNN:0;iRNA_PseU:0 13675 chr5 147693698 147693698 1 + G A LUSC 147693697 + 147693677 147693717 41 TTACAAGAAGTATCCAGTGGTGGCCATCCCCTGCCCCATCA TTACAAGAAGTATCCAGTGGTAGCCATCCCCTGCCCCATCA < 41bp 0.486038512304696 0.863613538515885 0.19735101 0.30836964 prediction 0.72722707703177 Functional Gain - SPINK7 ENSG00000145879 CDS Human protein_coding chr5:147693697 chr5:147693698 synonymous SNV . 0 22 hPsi_associated_SNPs_19951 0 0 0 0 2 unknown 0.438718592995181 0.438718592995102 0 0 hPsi_site_13675 iPseU_CNN:0;iRNA_PseU:0 13676 chr1 11574545 11574545 1 + G A LUAD 11574544 + 11574524 11574564 41 TGGCCTTCATCAGCAGCAGCTGCATTGCTGCCCTGGTCTAC TGGCCTTCATCAGCAGCAGCTACATTGCTGCCCTGGTCTAC < 41bp 0.471688804872176 0.863609189378744 0.49276146 0.864106 prediction 0.727218378757488 Functional Gain - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11574544 chr1:11574545 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_19952 0 0 0 0 2 exosome 0.435451994045662 0.438801316755868 0.728212 0 hPsi_site_13676 iPseU_CNN:0.728212;iRNA_PseU:0 13677 chr3 5244802 5244802 1 + G A BLCA 5244801 + 5244781 5244821 41 GACGAGCAGTGAAAGCCCTTTGGAACCTCCGGAGCAATGAT GACGAGCAGTGAAAGCCCTTTAGAACCTCCGGAGCAATGAT < 41bp 0.520392298124801 0.883982016712195 0.650378 0.7678753 prediction 0.727179437174787 Functional Gain - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5244801 chr3:5244802 stopgain 1.000 1 22 hPsi_associated_SNPs_19953 0 0 1 0 1 Ribosome 0.438718687535057 0.438722163146785 0.2349946 0 hPsi_site_13677 iPseU_CNN:0.2349946;iRNA_PseU:0 13678 chr11 76506922 76506922 1 + G A BLCA 76506921 + 76506901 76506941 41 CCGGGCTACACGACGTTGGCTGGCCTGGATCTCAGCCACAA CCGGGCTACACGACGTTGGCTAGCCTGGATCTCAGCCACAA < 41bp 0.507816258659938 0.871401614855529 0.2431207 0.5703657 prediction 0.727170712391182 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76506921 chr11:76506922 nonsynonymous SNV 0.980 1 22 hPsi_associated_SNPs_19954 0 0 1 0 0 Endoplasmic reticulum 0.43871859299721 0.438718599387297 0.1407314 0 hPsi_site_13678 iPseU_CNN:0.1407314;iRNA_PseU:0 13679 chr12 14613484 14613484 1 + G A rs140561687 14613483 + 14613463 14613503 41 TGTCAGTAGTCAACCTAAATTGCAGACTCCAGTGACTTCGG TGTCAGTAGTCAACCTAAATTACAGACTCCAGTGACTTCGG < 41bp 0.50594491879335 0.869528502210531 0.24819541 0.27865356 prediction 0.727167166834362 Functional Gain - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14613483 chr12:14613484 synonymous SNV . 0 22 hPsi_associated_SNPs_19955 0 0 1 1 1 Cytosol 0.438711071124585 0.438634226972325 0 0 hPsi_site_13679 iPseU_CNN:0;iRNA_PseU:0 13680 chr11 134181025 134181025 1 + G A SARC 134181024 + 134181004 134181044 41 TCCCCCCGTGAGACCGTCGCTGTACCTCCCGCTGTGGGACG TCCCCCCGTGAGACCGTCGCTATACCTCCCGCTGTGGGACG < 41bp 0.470692190500238 0.863582651913362 0.3486591 0.47657916 prediction 0.727165303826723 Functional Gain - GLB1L3 ENSG00000166105 CDS Human protein_coding chr11:134181024 chr11:134181025 synonymous SNV . 0 22 hPsi_associated_SNPs_19956 0 0 0 0 1 Nucleus 0.438560714971985 0.438471864205305 0 0 hPsi_site_13680 iPseU_CNN:0;iRNA_PseU:0 13681 chr12 56397621 56397621 1 + G A BRCA 56397620 + 56397600 56397640 41 CACAACCAGTCCCATGTGCGTGAGTTACTGGCTCAGTACAA CACAACCAGTCCCATGTGCGTAAGTTACTGGCTCAGTACAA < 41bp 0.484211852510689 0.863581376919509 0.1892043 0.53702074 prediction 0.727162753839018 Functional Gain - SUOX ENSG00000139531 CDS Human protein_coding chr12:56397620 chr12:56397621 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_19957 0 0 1 0 0 Cytosol 0.438452543170555 0.438703535738923 0.07404148 0 hPsi_site_13681 iPseU_CNN:0.07404148;iRNA_PseU:0 13682 chr16 56686970 56686970 1 + G A rs148916841 56686969 + 56686949 56686989 41 CATCAGAGAAGTGCCGCTGCTGTGCCTGATGTTGGGAGAGC CATCAGAGAAGTGCCGCTGCTATGCCTGATGTTGGGAGAGC < 41bp 0.508691038764127 0.872270012018296 0.40928334 0.7630374 prediction 0.727157946508338 Functional Gain - MT1B ENSG00000169688 CDS Human protein_coding chr16:56686969 chr16:56686970 nonsynonymous SNV 0.018 1 22 hPsi_associated_SNPs_19958 0 0 0 0 1 Endoplasmic reticulum 0.438137093381478 0.438542249489363 0.5260748 0 hPsi_site_13682 iPseU_CNN:0.5260748;iRNA_PseU:0 13683 chr6 43041689 43041689 1 + G A SARC 43041688 + 43041668 43041708 41 AACTATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTGAG AACTATCTGAACCAACCTAGTACAGCACCCCTCCAGGTGAG < 41bp 0.514523615724009 0.878091829937413 0.29155922 0.7688705 prediction 0.727136428426808 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43041688 chr6:43041689 nonsynonymous SNV 0.935 0 22 hPsi_associated_SNPs_19959 0 0 1 0 2 Cytosol 0.438721777239017 0.438718406309836 0.537741 0 hPsi_site_13683 iPseU_CNN:0.537741;iRNA_PseU:0 13684 chr2 74883723 74883723 1 + G A LUAD 74883722 + 74883702 74883742 41 TACAATTACTCTGTTCTCCTTGTGGATCCTGCCTCCCACAC TACAATTACTCTGTTCTCCTTATGGATCCTGCCTCCCACAC < 41bp 0.520754774416433 0.884321030645367 0.38672042 0.3499658 prediction 0.727132512457868 Functional Gain - SEMA4F ENSG00000135622 CDS Human protein_coding chr2:74883722 chr2:74883723 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_19960 0 0 1 0 1 nucleus 0.438718595028166 0.438719141876983 0 0 hPsi_site_13684 iPseU_CNN:0;iRNA_PseU:0 13685 chr11 66625928 66625928 1 + G A UCEC 66625927 + 66625907 66625947 41 TTAGCGGGAACCCCCTGCACTGCAACTGTGAGCTGCTGTGG TTAGCGGGAACCCCCTGCACTACAACTGTGAGCTGCTGTGG < 41bp 0.498998419741372 0.863565301464539 0.42714527 0.78825307 prediction 0.727130602929077 Functional Gain - LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66625927 chr11:66625928 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19961 0 0 1 0 0 Ribosome 0.438715762619301 0.438906588254 0.57650614 0 hPsi_site_13685 iPseU_CNN:0.57650614;iRNA_PseU:0 13686 chr10 76978897 76978897 1 + G A LAML 76978896 + 76978876 76978916 41 TGGAGACCAAATACAAGTGGTGTGAGTATGGTCTGACTTTC TGGAGACCAAATACAAGTGGTATGAGTATGGTCTGACTTTC < 41bp 0.496553645371007 0.863555614274835 0.28542572 0.56651926 prediction 0.727111228549669 Functional Gain - VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76978896 chr10:76978897 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_19962 0 0 1 0 2 Ribosome 0.437673565351556 0.43524041934744 0.13303852 0 hPsi_site_13686 iPseU_CNN:0.13303852;iRNA_PseU:0 13687 chr2 70502205 70502205 1 + G A STAD 70502204 + 70502184 70502224 41 TCGAACACTTCTTGAAACCTTGCAAAAGGCCGGCTTTTCTG TCGAACACTTCTTGAAACCTTACAAAAGGCCGGCTTTTCTG < 41bp 0.483732414591152 0.863545793167014 0.39779603 0.64571 prediction 0.727091586334027 Functional Gain - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70502204 chr2:70502205 synonymous SNV . 0 22 hPsi_associated_SNPs_19963 0 0 1 0 1 Ribosome 0.43871859314654 0.438718593000154 0.29142 0 hPsi_site_13687 iPseU_CNN:0.29142;iRNA_PseU:0 13688 chr19 42796488 42796488 1 + G A STAD 42796487 + 42796467 42796507 41 GTCAGCGGGCGGGCACGCGCTGCCCCTGGGTACCAGCCCTG GTCAGCGGGCGGGCACGCGCTACCCCTGGGTACCAGCCCTG < 41bp 0.484174423016218 0.863533289616955 0.10048786 0.42306462 prediction 0.72706657923391 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42796487 chr19:42796488 synonymous SNV . 0 22 hPsi_associated_SNPs_19964 0 0 1 0 1 Cytosol 0.438718592722266 0.438718028811699 0 0 hPsi_site_13688 iPseU_CNN:0;iRNA_PseU:0 13689 chr4 108935703 108935703 1 + G A HNSC 108935702 + 108935682 108935722 41 CATCGTGGAGAATCTGAAGGTGAAAAACGAGCTCTTCAAAA CATCGTGGAGAATCTGAAGGTAAAAAACGAGCTCTTCAAAA < 41bp 0.486227543061005 0.863526123244483 0.3187778 0.7716843 prediction 0.727052246488966 Functional Gain - HADH ENSG00000138796 CDS Human protein_coding chr4:108935702 chr4:108935703 synonymous SNV . 0 22 hPsi_associated_SNPs_19965 0 0 1 0 1 Cytosol 0.438718592593694 0.438718593082815 0.5433686 0 hPsi_site_13689 iPseU_CNN:0.5433686;iRNA_PseU:0 13690 chr17 45787901 45787901 1 + G A BLCA 45787900 + 45787880 45787920 41 TGGGCTCCGACATCCGCAGCTGCCCCCTCTGCCAGCTGGGT TGGGCTCCGACATCCGCAGCTACCCCCTCTGCCAGCTGGGT < 41bp 0.500992128161802 0.864517880353341 0.3124349 0.68170714 prediction 0.727051504383078 Functional Gain - TBKBP1 ENSG00000198933 CDS Human protein_coding chr17:45787900 chr17:45787901 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_19966 0 0 0 0 1 Cytosol 0.438717618025475 0.438701203478858 0.36341428 0 hPsi_site_13690 iPseU_CNN:0.36341428;iRNA_PseU:0 13691 chr3 44673988 44673988 1 + G A UCEC 44673987 + 44673967 44674007 41 GTTGGTGATGTTCGAGGAGGTGTCAGTATGCTTCACTTCAG GTTGGTGATGTTCGAGGAGGTATCAGTATGCTTCACTTCAG < 41bp 0.489974433046274 0.863524212896854 0.2691489 0.6432202 prediction 0.727048425793708 Functional Gain - ZNF197;ZNF660-ZNF197 ENSG00000186448 CDS Human protein_coding chr3:44673987 chr3:44673988 synonymous SNV . 0 22 hPsi_associated_SNPs_19967 0 0 1 0 1 unknown 0.430415150238767 0.437968452799646 0.2864404 0 hPsi_site_13691 iPseU_CNN:0.2864404;iRNA_PseU:0 13692 chr5 169533282 169533282 1 + G A LUSC 169533281 + 169533261 169533301 41 GGGGCTTGGGGGGAGCGACCTGGGCTGGCTGCCCATCCCCT GGGGCTTGGGGGGAGCGACCTAGGCTGGCTGCCCATCCCCT < 41bp 0.491962949138311 0.86352207646148 0.40296698 0.6163324 prediction 0.72704415292296 Functional Gain - FOXI1 ENSG00000168269 CDS Human protein_coding chr5:169533281 chr5:169533282 synonymous SNV . 0 22 hPsi_associated_SNPs_19968 0 0 0 0 0 exosome 0.438724633150284 0.438785432770393 0.2326648 0 hPsi_site_13692 iPseU_CNN:0.2326648;iRNA_PseU:0 13693 chr19 49261316 49261316 1 + G A ACC 49261315 + 49261295 49261335 41 AAGTCCCCACACCGGGACCCTGCACCCCGAGGACCAGCTCG AAGTCCCCACACCGGGACCCTACACCCCGAGGACCAGCTCG < 41bp 0.483215125561472 0.863521576141487 0.27603573 0.62546855 prediction 0.727043152282974 Functional Gain - FGF21 ENSG00000105550 CDS Human protein_coding chr19:49261315 chr19:49261316 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_19969 0 0 0 0 0 unknown 0.438713143037006 0.439907675772484 0.2509371 0 hPsi_site_13693 iPseU_CNN:0.2509371;iRNA_PseU:0 13694 chr20 39986540 39986540 1 + G A rs2072969 39986539 + 39986519 39986559 41 CAGAAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCA CAGAAATGGGTACAAGTTCCTATACTGCTCGGCGCGGGCCA < 41bp 0.475467421226124 0.863515425593886 0.34680754 0.54425913 prediction 0.727030851187771 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39986539 chr20:39986540 synonymous SNV . 0 22 hPsi_associated_SNPs_19970 0 0 0 1 2 Nucleus 0.438718553247762 0.438717877219711 0.0885182600000001 0 hPsi_site_13694 iPseU_CNN:0.0885182600000001;iRNA_PseU:0 13695 chr19 44500633 44500633 1 + G A STAD 44500632 + 44500612 44500652 41 GAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTC GAAACTCTTTATGTGTGATGTATGTGGCAAGGAATTTAGTC < 41bp 0.503594687893657 0.867106413077851 0.18374163 0.25944662 prediction 0.727023450368387 Functional Gain - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44500632 chr19:44500633 synonymous SNV . 0 22 hPsi_associated_SNPs_19971 0 0 1 0 0 cytosol 0.438919778388438 0.440194735917907 0 0 hPsi_site_13695 iPseU_CNN:0;iRNA_PseU:0 13696 chr9 37493652 37493652 1 + G A UCEC 37493651 + 37493631 37493671 41 GGCAATGAATCTTTGAATCGTGCAGTGGCTAAAGCTGCAGA GGCAATGAATCTTTGAATCGTACAGTGGCTAAAGCTGCAGA < 41bp 0.502237701595687 0.86574297236795 0.26842916 0.52713436 prediction 0.727010541544526 Functional Gain - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37493651 chr9:37493652 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_19972 0 0 1 0 2 Ribosome 0.437547944583042 0.429001156210913 0.05426872 0 hPsi_site_13696 iPseU_CNN:0.05426872;iRNA_PseU:0 13697 chr11 65055264 65055264 1 + G A BLCA 65055263 + 65055243 65055283 41 ATCACGTATGACCCCCTGCTTGACCTGATTGCTGTCATCAA ATCACGTATGACCCCCTGCTTAACCTGATTGCTGTCATCAA < 41bp 0.481646262089889 0.863500722447282 0.22569185 0.32449114 prediction 0.727001444894564 Functional Gain - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65055263 chr11:65055264 nonsynonymous SNV 0.829 4 22 hPsi_associated_SNPs_19973 0 0 1 0 2 Endoplasmic reticulum 0.438702079064257 0.438718519266414 0 0 hPsi_site_13697 iPseU_CNN:0;iRNA_PseU:0 13698 chr22 42422922 42422922 1 + G A SKCM 42422921 + 42422901 42422941 41 CGATATGGAGCCCCACCTCTTGGATACGGAGCCCCACCTGC CGATATGGAGCCCCACCTCTTAGATACGGAGCCCCACCTGC < 41bp 0.486765502135086 0.863480366759112 0.25887147 0.41705772 prediction 0.726960733518223 Functional Gain - WBP2NL ENSG00000183066 CDS Human protein_coding chr22:42422921 chr22:42422922 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_19974 0 0 0 0 0 exosome 0.43871859267485 0.438718593002935 0 0 hPsi_site_13698 iPseU_CNN:0;iRNA_PseU:0 13699 chr19 12856311 12856311 1 + G A LUAD 12856310 + 12856290 12856330 41 AGCGCATTTCCCGGCATCGATGAGGCCATGAGCTATGCCGA AGCGCATTTCCCGGCATCGATAAGGCCATGAGCTATGCCGA < 41bp 0.479899989827845 0.863479000741387 0.19294474 0.2870351 prediction 0.726958001482773 Functional Gain - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12856310 chr19:12856311 nonsynonymous SNV 0.949 4 22 hPsi_associated_SNPs_19975 0 0 0 0 1 Ribosome 0.438722446129713 0.438718593107063 0 0 hPsi_site_13699 iPseU_CNN:0;iRNA_PseU:0 13700 chr2 219674356 219674356 1 + G A UCEC 219674355 + 219674335 219674375 41 GTCCTACTTAGGGCCTCAGATGCACGTGAACCTGGCCAGTG GTCCTACTTAGGGCCTCAGATACACGTGAACCTGGCCAGTG < 41bp 0.519809497113358 0.883282498727584 0.3010834 0.853095 prediction 0.726946003228452 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219674355 chr2:219674356 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_19976 0 0 1 0 1 cytosol 0.438719082797426 0.438718474873747 0.70619 0 hPsi_site_13700 iPseU_CNN:0.70619;iRNA_PseU:0 13701 chr18 12277206 12277206 1 + G A SKCM 12277205 + 12277185 12277225 41 CACATACATGCTCCGGGTGCTGGATGACAAGGAAGAGCGGC CACATACATGCTCCGGGTGCTAGATGACAAGGAAGAGCGGC < 41bp 0.492430682972609 0.863471937662022 0.20653284 0.46888006 prediction 0.726943875324043 Functional Gain - CIDEA ENSG00000176194 CDS Human protein_coding chr18:12277205 chr18:12277206 synonymous SNV . 0 22 hPsi_associated_SNPs_19977 0 0 0 0 1 unknown 0.438718743003652 0.441405938214986 0 0 hPsi_site_13701 iPseU_CNN:0;iRNA_PseU:0 13702 chr9 33344096 33344096 1 + G A CESC 33344095 + 33344075 33344115 41 GAATTAACCTGCCATTGTGGTGCATCAGTGATTTACCCTCC GAATTAACCTGCCATTGTGGTACATCAGTGATTTACCCTCC < 41bp 0.469392954267854 0.863468932110296 0.17912886 0.25817072 prediction 0.726937864220592 Functional Gain - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33344095 chr9:33344096 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_19978 0 0 1 0 2 Nucleus 0.438718593484633 0.438718592996663 0 0 hPsi_site_13702 iPseU_CNN:0;iRNA_PseU:0 13703 chr3 9803411 9803411 1 + C T BLCA 9803412 - 9803392 9803432 41 CTGCTGTACTACAGCCTGGATGAAGACTCCAAAATCATGAT CTGCTGTACTACAGCCTGGATAAAGACTCCAAAATCATGAT < 41bp 0.476937227543068 0.863463186084168 0.28394645 0.63949347 prediction 0.726926372168337 Functional Gain - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803412 chr3:9803411 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_19979 0 0 1 0 2 Ribosome 0.437744662115817 0.428926103088052 0.27898694 0 hPsi_site_13703 iPseU_CNN:0.27898694;iRNA_PseU:0 13704 chr10 99344566 99344566 1 + G A LGG 99344565 + 99344545 99344585 41 GAGGGGAAGAAGGTGGACATTGCGGGTATCTACCCCCCTGT GAGGGGAAGAAGGTGGACATTACGGGTATCTACCCCCCTGT < 41bp 0.477559742489178 0.863450313500475 0.29438746 0.55826914 prediction 0.726900627000951 Functional Gain - HOGA1 ENSG00000155252;ENSG00000241935;ENSG00000249967 CDS Human other chr10:99344565 chr10:99344566 nonsynonymous SNV 0.198 1 22 hPsi_associated_SNPs_19980 1 0 0 0 0 nucleus 0.438614718482328 0.438721669591136 0.11653828 0 hPsi_site_13704 iPseU_CNN:0.11653828;iRNA_PseU:0 13705 chr2 74652006 74652006 1 + G A COAD 74652005 + 74651985 74652025 41 CTTGCCTTTCCCTTCAGGATTGTGTGGCTGACATGGTGACG CTTGCCTTTCCCTTCAGGATTATGTGGCTGACATGGTGACG < 41bp 0.484073273629101 0.863447622101451 0.27787274 0.29736456 prediction 0.726895244202901 Functional Gain - WDR54 ENSG00000005448 CDS Human protein_coding chr2:74652005 chr2:74652006 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_19981 0 0 1 0 2 nucleus 0.438710870389216 0.438500399705881 0 0 hPsi_site_13705 iPseU_CNN:0;iRNA_PseU:0 13706 chr2 203836297 203836297 1 + G A COAD 203836296 + 203836276 203836316 41 AGAGACTCCCTGCCTCACTTTGTCACCTTCTCCTTTTCCTG AGAGACTCCCTGCCTCACTTTATCACCTTCTCCTTTTCCTG < 41bp 0.511204086677439 0.874646704893373 0.3862169 0.5167622 prediction 0.726885236431866 Functional Gain - CARF ENSG00000138380 CDS Human protein_coding chr2:203836296 chr2:203836297 synonymous SNV . 0 22 hPsi_associated_SNPs_19982 0 0 0 0 1 nucleus 0.438718592990904 0.438718592993825 0.0335243999999999 0 hPsi_site_13706 iPseU_CNN:0.0335243999999999;iRNA_PseU:0 13707 chr16 8738480 8738480 1 + G A UCEC 8738479 + 8738459 8738499 41 CGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCG CGATCACTTCCGCTCCTGCCTACACGCGCTGGAGCAGCTCG < 41bp 0.481913145601784 0.863434615903794 0.36526543 0.6566541 prediction 0.726869231807589 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8738479 chr16:8738480 synonymous SNV . 0 22 hPsi_associated_SNPs_19983 0 0 1 0 1 Cytosol 0.438396799913787 0.437984958744175 0.3133082 0 hPsi_site_13707 iPseU_CNN:0.3133082;iRNA_PseU:0 13708 chr7 150935717 150935717 1 + G A STAD 150935716 + 150935696 150935736 41 CTGGAGGGGCTAGGGGGCCGTGCCCAGCTGGCTATGGCTCT CTGGAGGGGCTAGGGGGCCGTACCCAGCTGGCTATGGCTCT < 41bp 0.495705853356496 0.863434251510067 0.16224808 0.66978395 prediction 0.726868503020134 Functional Gain - CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150935716 chr7:150935717 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_19984 0 0 1 0 0 Nucleus 0.438718593456317 0.438719178335734 0.3395679 0 hPsi_site_13708 iPseU_CNN:0.3395679;iRNA_PseU:0 13709 chr16 81061821 81061821 1 + G A HNSC 81061820 + 81061800 81061840 41 TTAAATGGGAGCATCTTGGCTGAGAGGGAAGAACCCCTCCG TTAAATGGGAGCATCTTGGCTAAGAGGGAAGAACCCCTCCG < 41bp 0.480365761514696 0.863419630316979 0.24772733 0.64452875 prediction 0.726839260633959 Functional Gain - CENPN ENSG00000166451 CDS Human protein_coding chr16:81061820 chr16:81061821 nonsynonymous SNV 0.620 0 22 hPsi_associated_SNPs_19985 0 0 1 0 2 Ribosome 0.438718920868534 0.4387186362057 0.2890575 0 hPsi_site_13709 iPseU_CNN:0.2890575;iRNA_PseU:0 13710 chr7 102106340 102106340 1 + G A BLCA 102106339 + 102106319 102106359 41 CTGACGCAGCTGCAGGAGCTTGACCTGTCTAACAACCACCT CTGACGCAGCTGCAGGAGCTTAACCTGTCTAACAACCACCT < 41bp 0.48536053886395 0.863415621892851 0.23716572 0.5344057 prediction 0.726831243785703 Functional Gain - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102106339 chr7:102106340 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_19986 0 0 1 0 1 Ribosome 0.438718526642012 0.438718592995101 0.0688114 0 hPsi_site_13710 iPseU_CNN:0.0688114;iRNA_PseU:0 13711 chr17 79967026 79967026 1 + G A rs200865502 79967025 + 79967005 79967045 41 TGAGTTCTTTGAGCTGACGGTGGACGACGTGAGAAGACGCT TGAGTTCTTTGAGCTGACGGTAGACGACGTGAGAAGACGCT < 41bp 0.514496074751368 0.877888190721782 0.35579747 0.84387827 prediction 0.726784231940828 Functional Gain - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79967025 chr17:79967026 synonymous SNV . 0 22 hPsi_associated_SNPs_19987 0 0 1 0 1 Ribosome 0.438720131505055 0.438558472835508 0.68775654 0 hPsi_site_13711 iPseU_CNN:0.68775654;iRNA_PseU:0 13712 chr5 140558309 140558309 1 + G A BLCA 140558308 + 140558288 140558328 41 GGCACTGCTCAGGTCTACATTGAAGTTGTCGATGTCAATGA GGCACTGCTCAGGTCTACATTAAAGTTGTCGATGTCAATGA < 41bp 0.500788647367868 0.864175475659061 0.29291016 0.27845588 prediction 0.726773656582386 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140558308 chr5:140558309 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_19988 0 0 0 0 0 exosome 0.438718798594506 0.441899740784784 0 0 hPsi_site_13712 iPseU_CNN:0;iRNA_PseU:0 13713 chr11 47281380 47281380 1 + G A BLCA 47281379 + 47281359 47281399 41 TGGAAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAGGG TGGAAGCCAGGCGCACAGGATACAAGCAGCCAGGCCCAGGG < 41bp 0.520039422336016 0.883412270902591 0.26005653 0.66800296 prediction 0.726745697133149 Functional Gain - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47281379 chr11:47281380 nonsynonymous SNV 0.107 0 22 hPsi_associated_SNPs_19989 0 0 1 0 1 Ribosome 0.438718594076612 0.438718824607757 0.33600592 0 hPsi_site_13713 iPseU_CNN:0.33600592;iRNA_PseU:0 13714 chr12 108600159 108600159 1 + G A UCEC 108600158 + 108600138 108600178 41 AAAAGATGACCATCTTCCGTTGCCAGGACAACTGTGCTGAA AAAAGATGACCATCTTCCGTTACCAGGACAACTGTGCTGAA < 41bp 0.47943327462391 0.863355848330124 0.20070508 0.742303 prediction 0.726711696660248 Functional Gain - WSCD2 ENSG00000075035 CDS Human protein_coding chr12:108600158 chr12:108600159 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_19990 0 0 0 0 2 Endoplasmic reticulum 0.438723306128667 0.43871856414078 0.484606 0 hPsi_site_13714 iPseU_CNN:0.484606;iRNA_PseU:0 13715 chr20 37214697 37214697 1 + G A rs73905648 37214696 + 37214676 37214716 41 AGAGGAAAATGACTCCAGTGTGTGCTTGGATTGGGAGCCCT AGAGGAAAATGACTCCAGTGTATGCTTGGATTGGGAGCCCT < 41bp 0.507797777174448 0.871140325117518 0.23833734 0.29447573 prediction 0.726685095886141 Functional Gain - ADIG ENSG00000182035 CDS Human protein_coding chr20:37214696 chr20:37214697 synonymous SNV . 0 22 hPsi_associated_SNPs_19991 0 0 0 0 1 nucleolus 0.438718592995005 0.438718591541639 0 0 hPsi_site_13715 iPseU_CNN:0;iRNA_PseU:0 13716 chr1 205498652 205498652 1 + G A COAD 205498651 + 205498631 205498671 41 CGCGCCTTCTCCTTGCAGGTTGGATACGGATGGCATCCACC CGCGCCTTCTCCTTGCAGGTTAGATACGGATGGCATCCACC < 41bp 0.502766615880247 0.866085800920287 0.8148211 0.85063386 prediction 0.72663837008008 Functional Gain - CDK18 ENSG00000117266 CDS Human protein_coding chr1:205498651 chr1:205498652 synonymous SNV . 0 22 hPsi_associated_SNPs_19992 0 0 1 0 2 nucleus 0.43871952339241 0.438899050135133 0.07162552 0 hPsi_site_13716 iPseU_CNN:0.07162552;iRNA_PseU:0 13717 chrX 152914728 152914728 1 + G A BLCA 152914727 + 152914707 152914747 41 GCCGAGTGCCCTCACCTGTGTGAGACCAGCCTTGCTGGCCG GCCGAGTGCCCTCACCTGTGTAAGACCAGCCTTGCTGGCCG < 41bp 0.51435935686253 0.877660631072011 0.4035657 0.77522075 prediction 0.726602548418962 Functional Gain - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152914727 chrX:152914728 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_19993 0 0 1 0 1 cytosol 0.438641677724632 0.438717950349284 0.5504415 0 hPsi_site_13717 iPseU_CNN:0.5504415;iRNA_PseU:0 13718 chr5 156671437 156671437 1 + G A rs17595896 156671436 + 156671416 156671456 41 GCTGGGCATGTGTCTGGATGTGTGTGAGGGCATGGCCTACC GCTGGGCATGTGTCTGGATGTATGTGAGGGCATGGCCTACC < 41bp 0.479466717619416 0.863300707246877 0.2889368 0.5172237 prediction 0.726601414493755 Functional Gain - ITK ENSG00000113263 CDS Human protein_coding chr5:156671436 chr5:156671437 synonymous SNV . 0 22 hPsi_associated_SNPs_19994 0 0 1 0 1 exosome 0.438719301349823 0.438719253100482 0.0344473999999999 0 hPsi_site_13718 iPseU_CNN:0.0344473999999999;iRNA_PseU:0 13719 chr12 81102718 81102718 1 + G A LUAD 81102717 + 81102697 81102737 41 GGAACGCAAACTCCCCTGCGTGGAGGAAGTGGTGGAGAAGT GGAACGCAAACTCCCCTGCGTAGAGGAAGTGGTGGAGAAGT < 41bp 0.50162380745717 0.864923561771902 0.20947391 0.36837983 prediction 0.726599508629465 Functional Gain - MYF6 ENSG00000111046 CDS Human protein_coding chr12:81102717 chr12:81102718 synonymous SNV . 0 22 hPsi_associated_SNPs_19995 0 0 0 0 1 unknown 0.438718898812699 0.438718593008933 0 0 hPsi_site_13719 iPseU_CNN:0;iRNA_PseU:0 13720 chrX 151818219 151818219 1 + G A CESC 151818218 + 151818198 151818238 41 TTCCCAGATGGTTACACGGTTGAAGACATCATATTATTCTG TTCCCAGATGGTTACACGGTTAAAGACATCATATTATTCTG < 41bp 0.509069771037554 0.872368815829715 0.8107694 0.9440632 prediction 0.726598089584322 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151818218 chrX:151818219 nonsynonymous SNV 0.964 2 22 hPsi_associated_SNPs_19996 0 0 0 0 1 chromatin 0.438632060815735 0.438408234742752 0.2665876 0 hPsi_site_13720 iPseU_CNN:0.2665876;iRNA_PseU:0 13721 chr17 65040820 65040820 1 + G A UCEC 65040819 + 65040799 65040839 41 AGGTCCGCGTGACCCTCTTCTGCATCCTGGCAGGCATCGTG AGGTCCGCGTGACCCTCTTCTACATCCTGGCAGGCATCGTG < 41bp 0.487055152201413 0.863275063533463 0.27950603 0.5743916 prediction 0.726550127066925 Functional Gain - CACNG1 ENSG00000108878 CDS Human protein_coding chr17:65040819 chr17:65040820 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_19997 0 0 0 0 0 unknown 0.438650863400554 0.438370097105799 0.1487832 0 hPsi_site_13721 iPseU_CNN:0.1487832;iRNA_PseU:0 13722 chr6 43143632 43143632 1 + G A CESC 43143631 + 43143611 43143651 41 CAGTGCCAATGGGACTGTGCTGAAGAGTACAGGCAGCGGCC CAGTGCCAATGGGACTGTGCTAAAGAGTACAGGCAGCGGCC < 41bp 0.51606502504043 0.879339985562029 0.21452439 0.61349654 prediction 0.726549921043198 Functional Gain - SRF ENSG00000112658 CDS Human protein_coding chr6:43143631 chr6:43143632 synonymous SNV . 0 22 hPsi_associated_SNPs_19998 0 0 1 0 1 Ribosome 0.438718592310146 0.438718592995098 0.22699308 0 hPsi_site_13722 iPseU_CNN:0.22699308;iRNA_PseU:0 13723 chr12 48578025 48578025 1 + G A UCEC 48578024 + 48578004 48578044 41 CGGGGAGTACAACGGCGGCATGAAGGAACTGATGGAGCACC CGGGGAGTACAACGGCGGCATAAAGGAACTGATGGAGCACC < 41bp 0.500959507035773 0.864219171663432 0.19585127 0.3502262 prediction 0.726519329255318 Functional Gain - CCDC184 ENSG00000177875 CDS Human protein_coding chr12:48578024 chr12:48578025 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_19999 0 0 0 0 0 exosome 0.438727038392859 0.438723775902566 0 0 hPsi_site_13723 iPseU_CNN:0;iRNA_PseU:0 13724 chr15 75630990 75630990 1 + G A LGG 75630989 + 75630969 75631009 41 GGTCTCCTTTCCCCATAGTATGAGAAGATCCTGAAGCTCAC GGTCTCCTTTCCCCATAGTATAAGAAGATCCTGAAGCTCAC < 41bp 0.504282865025441 0.867525943426567 0.357037 0.43989897 prediction 0.726486156802252 Functional Gain - COMMD4 ENSG00000140365 CDS Human protein_coding chr15:75630989 chr15:75630990 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_20000 0 0 1 1 2 Ribosome 0.438718592995102 0.438718592995121 0 0 hPsi_site_13724 iPseU_CNN:0;iRNA_PseU:0 13725 chr11 70281161 70281161 1 + G A BLCA 70281160 + 70281140 70281180 41 GATGAGATCTCATTTGACCCTGATGACATCATCACCAACAT GATGAGATCTCATTTGACCCTAATGACATCATCACCAACAT < 41bp 0.504760380087909 0.867973245171502 0.14483571 0.15422222 prediction 0.726425730167185 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281160 chr11:70281161 nonsynonymous SNV 0.965 3 22 hPsi_associated_SNPs_20001 0 0 1 0 2 Ribosome 0.43291230829192 0.439494129235807 0 0 hPsi_site_13725 iPseU_CNN:0;iRNA_PseU:0 13726 chr17 73043641 73043641 1 + G A SKCM 73043640 + 73043620 73043660 41 GGGAGCCCAAGTCATTTCTCTGCCGCCTCTGCTGCCAGGAG GGGAGCCCAAGTCATTTCTCTACCGCCTCTGCTGCCAGGAG < 41bp 0.502333306151851 0.865542969581594 0.30605352 0.59990656 prediction 0.726419326859485 Functional Gain - KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73043640 chr17:73043641 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20002 0 0 1 0 1 Cytosol 0.43874505643633 0.438730575030895 0.19981312 0 hPsi_site_13726 iPseU_CNN:0.19981312;iRNA_PseU:0 13727 chr17 44791260 44791260 1 + G A LGG 44791259 + 44791239 44791279 41 ACTGCTTTAGCTGCAAAAATTGCAGAGGAATCCAACTTCCC ACTGCTTTAGCTGCAAAAATTACAGAGGAATCCAACTTCCC < 41bp 0.482782291534325 0.863205297661011 0.5539989 0.76116264 prediction 0.726410595322023 Functional Gain - NSF ENSG00000073969 CDS Human protein_coding chr17:44791259 chr17:44791260 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_20003 0 0 1 0 2 Ribosome 0.438718593191755 0.438718592993532 0.41432748 0 hPsi_site_13727 iPseU_CNN:0.41432748;iRNA_PseU:0 13728 chr16 28912174 28912174 1 + G A SKCM 28912173 + 28912153 28912193 41 TGCCTGCTGCTTCGCCCGTGTGGAGCCCTCGCACAAGTCCA TGCCTGCTGCTTCGCCCGTGTAGAGCCCTCGCACAAGTCCA < 41bp 0.474807066710697 0.86320529049097 0.67178965 0.7929698 prediction 0.726410580981941 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28912173 chr16:28912174 synonymous SNV . 0 22 hPsi_associated_SNPs_20004 0 0 1 0 1 chromatin 0.438713788934155 0.438729062469054 0.2423603 0 hPsi_site_13728 iPseU_CNN:0.2423603;iRNA_PseU:0 13729 chr10 50835719 50835719 1 + G A SKCM 50835718 + 50835698 50835738 41 GGGGGATCTGTTCACTCAGTTGAGAAAGATAGTCAAAATGG GGGGGATCTGTTCACTCAGTTAAGAAAGATAGTCAAAATGG < 41bp 0.483314582997891 0.863202664191893 0.26235965 0.4316518 prediction 0.726405328383786 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50835718 chr10:50835719 synonymous SNV . 0 22 hPsi_associated_SNPs_20005 0 0 0 0 1 unknown 0.439628587910157 0.438530295455091 0 0 hPsi_site_13729 iPseU_CNN:0;iRNA_PseU:0 13730 chr17 32684573 32684573 1 + G A STAD 32684572 + 32684552 32684592 41 GCAGAGGCTGAAGAGCTATGTGATCACCACCAGCAGGTGTC GCAGAGGCTGAAGAGCTATGTAATCACCACCAGCAGGTGTC < 41bp 0.485000692846407 0.863193096368987 0.33653674 0.6395585 prediction 0.726386192737974 Functional Gain - CCL13 ENSG00000181374 CDS Human protein_coding chr17:32684572 chr17:32684573 synonymous SNV . 0 22 hPsi_associated_SNPs_20006 0 0 0 0 2 exosome 0.438718152835845 0.438718640278216 0.279117 0 hPsi_site_13730 iPseU_CNN:0.279117;iRNA_PseU:0 13731 chr9 139697163 139697163 1 + G A LUAD 139697162 + 139697142 139697182 41 GGACAAGCTGCAGAACCTCGTGGTCAACTACTGCTCAGAGC GGACAAGCTGCAGAACCTCGTAGTCAACTACTGCTCAGAGC < 41bp 0.467227048301293 0.863190143254845 0.22471726 0.7417442 prediction 0.72638028650969 Functional Gain - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139697162 chr9:139697163 synonymous SNV . 0 22 hPsi_associated_SNPs_20007 0 0 1 0 2 chromatin 0.437964981421125 0.421543151269163 0.4834884 0 hPsi_site_13731 iPseU_CNN:0.4834884;iRNA_PseU:0 13732 chr1 45480122 45480122 1 + G A COAD 45480121 + 45480101 45480141 41 CCCTAACTAGGCATTGCAGCTGTTTGAGTCCCATGCAGGGC CCCTAACTAGGCATTGCAGCTATTTGAGTCCCATGCAGGGC < 41bp 0.512830694329253 0.876013338280865 0.548662 0.71663004 prediction 0.726365287903226 Functional Gain - UROD ENSG00000126088 CDS Human protein_coding chr1:45480121 chr1:45480122 synonymous SNV . 0 22 hPsi_associated_SNPs_20008 0 0 1 4 1 Ribosome 0.438719566050499 0.438745323569419 0.33593608 0 hPsi_site_13732 iPseU_CNN:0.33593608;iRNA_PseU:0 13733 chr14 65008896 65008896 1 + G A BLCA 65008895 + 65008875 65008915 41 CAACCAGAGCAGCGTACTGGTGCAGGTATACGAGGGCGAAC CAACCAGAGCAGCGTACTGGTACAGGTATACGAGGGCGAAC < 41bp 0.500447884939494 0.863626507240586 0.27245587 0.7597511 prediction 0.726357244602183 Functional Gain - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65008895 chr14:65008896 synonymous SNV . 0 22 hPsi_associated_SNPs_20009 0 0 0 0 0 Cytosol 0.438789763292745 0.43880661993313 0.5195022 0 hPsi_site_13733 iPseU_CNN:0.5195022;iRNA_PseU:0 13734 chr20 30681792 30681792 1 + G A BLCA 30681791 + 30681771 30681811 41 TTTGGCCTGGCCCGGGTCATTGAGGACAACGAGTACACGGC TTTGGCCTGGCCCGGGTCATTAAGGACAACGAGTACACGGC < 41bp 0.473331475272152 0.863169353047568 0.2321904 0.23155007 prediction 0.726338706095135 Functional Gain - HCK ENSG00000101336 CDS Human protein_coding chr20:30681791 chr20:30681792 nonsynonymous SNV 0.954 2 22 hPsi_associated_SNPs_20010 0 0 0 0 1 Nucleus 0.438718592996171 0.438718592992931 0 0 hPsi_site_13734 iPseU_CNN:0;iRNA_PseU:0 13735 chr9 126129490 126129490 1 + G A SKCM 126129489 + 126129469 126129509 41 GCGAGGTGGACGAGGACGAGTGTGCATCGAGCCCCTGCCAG GCGAGGTGGACGAGGACGAGTATGCATCGAGCCCCTGCCAG < 41bp 0.5147432179402 0.877911351221106 0.347379 0.43848976 prediction 0.726336266561812 Functional Gain - CRB2 ENSG00000148204 CDS Human protein_coding chr9:126129489 chr9:126129490 nonsynonymous SNV 0.827 5 22 hPsi_associated_SNPs_20011 0 0 0 0 1 exosome 0.438725873439952 0.43872095741352 0 0 hPsi_site_13735 iPseU_CNN:0;iRNA_PseU:0 13736 chr14 100848025 100848025 1 + G A THYM 100848024 + 100848004 100848044 41 CTGTCAACACCATTCAGTGGTGTCCAGTCCTTTCTAAGAGC CTGTCAACACCATTCAGTGGTATCCAGTCCTTTCTAAGAGC < 41bp 0.512824794895171 0.875991986170128 0.44758093 0.7353379 prediction 0.726334382549914 Functional Gain - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100848024 chr14:100848025 nonsynonymous SNV 0.825 3 22 hPsi_associated_SNPs_20012 0 0 1 1 0 chromatin 0.438717133120237 0.438718327239063 0.4706758 0 hPsi_site_13736 iPseU_CNN:0.4706758;iRNA_PseU:0 13737 chr11 3430166 3430166 1 + G A rs543866410 3430165 + 3430145 3430185 41 GTGGCCAGAAGCTGAAATGATGGCAGTAGTGCCACCTGGTG GTGGCCAGAAGCTGAAATGATAGCAGTAGTGCCACCTGGTG < 41bp 0.493342976748926 0.863151203469796 0.15452701 0.32068193 prediction 0.726302406939592 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3430165 chr11:3430166 . . 0 22 hPsi_associated_SNPs_20013 0 0 0 0 0 unknown 0.4387164694777 0.438720369936199 0 0 hPsi_site_13737 iPseU_CNN:0;iRNA_PseU:0 13738 chr2 88474265 88474265 1 + G A UCEC 88474264 + 88474244 88474284 41 CTGTGGCATGGCGTCACATATGCATTTAAGGACCTGTCCCT CTGTGGCATGGCGTCACATATACATTTAAGGACCTGTCCCT < 41bp 0.487916844658396 0.863133777149517 0.3225504 0.63588536 prediction 0.726267554299034 Functional Gain - THNSL2 ENSG00000144115 CDS Human protein_coding chr2:88474264 chr2:88474265 nonsynonymous SNV 0.930 4 22 hPsi_associated_SNPs_20014 0 0 0 1 1 exosome 0.438718641257575 0.438720216863822 0.27177072 0 hPsi_site_13738 iPseU_CNN:0.27177072;iRNA_PseU:0 13739 chr4 22737696 22737696 1 + G A UCEC 22737695 + 22737675 22737715 41 TTCAAGAACCAGACTGGCGATGTAGCTTGTGGCAGCTACAC TTCAAGAACCAGACTGGCGATATAGCTTGTGGCAGCTACAC < 41bp 0.492355560404396 0.863128301853096 0.23467234 0.25976247 prediction 0.726256603706191 Functional Gain - GBA3 ENSG00000249948 CDS Human polymorphic_pseudogene chr4:22737695 chr4:22737696 unknown 1.000 1 22 hPsi_associated_SNPs_20015 0 0 0 0 1 unknown 0.436956781271435 0.427030403762299 0 0 hPsi_site_13739 iPseU_CNN:0;iRNA_PseU:0 13740 chr1 179659934 179659934 1 + G A ESCA 179659933 + 179659913 179659953 41 ATCTGTAGACCAGCTGTCTTTGATTTTGTCTTATGAGTGCC ATCTGTAGACCAGCTGTCTTTAATTTTGTCTTATGAGTGCC < 41bp 0.503716919373751 0.866843624372464 0.29684228 0.40745923 prediction 0.726253409997427 Functional Gain - TDRD5 ENSG00000162782 CDS Human protein_coding chr1:179659933 chr1:179659934 synonymous SNV . 0 22 hPsi_associated_SNPs_20016 0 0 0 0 0 cytosol 0.438714713288524 0.43895710481383 0 0 hPsi_site_13740 iPseU_CNN:0;iRNA_PseU:0 13741 chr10 101124216 101124216 1 + G A HNSC 101124215 + 101124195 101124235 41 GGTAAGGAAGGCCTTCGCTTTGAAAATGGAGCCTTTACTTA GGTAAGGAAGGCCTTCGCTTTAAAAATGGAGCCTTTACTTA < 41bp 0.523883910542327 0.886991966485284 0.17006156 0.26350725 prediction 0.726216111885915 Functional Gain - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101124215 chr10:101124216 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_20017 0 0 0 0 1 cytosol 0.438718593099488 0.438718588801138 0 0 hPsi_site_13741 iPseU_CNN:0;iRNA_PseU:0 13742 chr17 29283456 29283456 1 + G A UCEC 29283455 + 29283435 29283475 41 GGAAAGTTTGCGGGGTGTCCTGTCCAGCCCCTTGACGCCCC GGAAAGTTTGCGGGGTGTCCTATCCAGCCCCTTGACGCCCC < 41bp 0.475408133418449 0.863094117082815 0.2951113 0.35798195 prediction 0.726188234165631 Functional Gain - ADAP2 ENSG00000184060 CDS Human protein_coding chr17:29283455 chr17:29283456 synonymous SNV . 0 22 hPsi_associated_SNPs_20018 0 0 0 0 1 Ribosome 0.438729876319326 0.438738871284633 0 0 hPsi_site_13742 iPseU_CNN:0;iRNA_PseU:0 13743 chr18 77895867 77895867 1 + G A CESC 77895866 + 77895846 77895886 41 GTCACTGGTGCCTGTGTATGTGAAGGTGAGGCCTCAGGCTG GTCACTGGTGCCTGTGTATGTAAAGGTGAGGCCTCAGGCTG < 41bp 0.492501576991644 0.863091556314082 0.39210132 0.77256995 prediction 0.726183112628164 Functional Gain - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895866 chr18:77895867 synonymous SNV . 0 22 hPsi_associated_SNPs_20019 0 0 1 0 0 Cytosol 0.438718587061084 0.438718593315752 0.5451399 0 hPsi_site_13743 iPseU_CNN:0.5451399;iRNA_PseU:0 13744 chr6 43473138 43473138 1 + G A UCEC 43473137 + 43473117 43473157 41 CCAGCTAGCTCTGCCAGCTCTGAAGAGGACCTGCTGGTCAG CCAGCTAGCTCTGCCAGCTCTAAAGAGGACCTGCTGGTCAG < 41bp 0.493025962529384 0.863088892169429 0.23491651 0.46934628 prediction 0.726177784338858 Functional Gain - TJAP1 ENSG00000137221 CDS Human protein_coding chr6:43473137 chr6:43473138 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_20020 0 0 1 0 0 chromatin 0.438741649332998 0.438662379636874 0 0 hPsi_site_13744 iPseU_CNN:0;iRNA_PseU:0 13745 chr2 98340604 98340604 1 + G A rs56127120 98340603 + 98340583 98340623 41 CATGGCGGACGGGCTCTTCCTGCTGCGCCAGTGCCTGCGCT CATGGCGGACGGGCTCTTCCTACTGCGCCAGTGCCTGCGCT < 41bp 0.490173472535683 0.863087100928769 0.31710845 0.76050353 prediction 0.726174201857539 Functional Gain - ZAP70 ENSG00000115085 CDS Human protein_coding chr2:98340603 chr2:98340604 synonymous SNV . 0 22 hPsi_associated_SNPs_20021 1 0 0 0 0 exosome 0.439354619505231 0.438724695550675 0.52100706 0 hPsi_site_13745 iPseU_CNN:0.52100706;iRNA_PseU:0 13746 chrX 153668353 153668353 1 + G A SKCM 153668352 + 153668332 153668372 41 GTGTTTGTGGCAAACTTCGATGAGAATGACCCCAAGACCTT GTGTTTGTGGCAAACTTCGATAAGAATGACCCCAAGACCTT < 41bp 0.489105117243501 0.863084527981107 0.2793712 0.45433128 prediction 0.726169055962213 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153668352 chrX:153668353 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20022 0 0 1 0 1 Cytosol 0.438726572697587 0.438718593162856 0 0 hPsi_site_13746 iPseU_CNN:0;iRNA_PseU:0 13747 chr4 147561504 147561504 1 + G A SKCM 147561503 + 147561483 147561523 41 GGACGCCGACCCGCGGGACCTGGAGGCATTCGCCGAGCGCT GGACGCCGACCCGCGGGACCTAGAGGCATTCGCCGAGCGCT < 41bp 0.484814204259134 0.863082395091138 0.20286876 0.33913314 prediction 0.726164790182276 Functional Gain - POU4F2 ENSG00000151615 CDS Human protein_coding chr4:147561503 chr4:147561504 synonymous SNV . 0 22 hPsi_associated_SNPs_20023 0 0 0 0 0 unknown 0.435747914323132 0.438718124207883 0 0 hPsi_site_13747 iPseU_CNN:0;iRNA_PseU:0 13748 chr4 147561847 147561847 1 + G A BLCA 147561846 + 147561826 147561866 41 ATTCAGCCTCGGCCCTCCTCTGAAAAGATCGCCGCCATCGC ATTCAGCCTCGGCCCTCCTCTAAAAAGATCGCCGCCATCGC < 41bp 0.513102450358711 0.876172336024462 0.3568826 0.45959032 prediction 0.726139771331503 Functional Gain - POU4F2 ENSG00000151615 CDS Human protein_coding chr4:147561846 chr4:147561847 nonsynonymous SNV 0.977 5 22 hPsi_associated_SNPs_20024 0 0 0 0 0 unknown 0.438718563602534 0.438718606003799 0 0 hPsi_site_13748 iPseU_CNN:0;iRNA_PseU:0 13749 chr12 2910358 2910358 1 + G A CESC 2910357 + 2910337 2910377 41 CACCTGGCCGTGAATGACTTTGAACTGGCACGGGCTGATTT CACCTGGCCGTGAATGACTTTAAACTGGCACGGGCTGATTT < 41bp 0.473231552174124 0.863067941157937 0.24783853 0.31958714 prediction 0.726135882315873 Functional Gain - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2910357 chr12:2910358 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_20025 0 0 1 0 1 Ribosome 0.438937568329284 0.438639656120302 0 0 hPsi_site_13749 iPseU_CNN:0;iRNA_PseU:0 13750 chr17 37884091 37884091 1 + G A SKCM 37884090 + 37884070 37884110 41 GTCAAAGACGTTTTTGCCTTTGGGGGTGCCGTGGAGAACCC GTCAAAGACGTTTTTGCCTTTAGGGGTGCCGTGGAGAACCC < 41bp 0.492585784115013 0.863066407067285 0.2301113 0.33958173 prediction 0.72613281413457 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37884090 chr17:37884091 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20026 0 0 1 0 0 Cytosol 0.438718564870872 0.43871830498034 0 0 hPsi_site_13750 iPseU_CNN:0;iRNA_PseU:0 13751 chr7 102065534 102065534 1 + G A COAD 102065533 + 102065513 102065553 41 AACAGAGGAGGAGGAGGAAGTGCCCAGTTTCACCATGGGGC AACAGAGGAGGAGGAGGAAGTACCCAGTTTCACCATGGGGC < 41bp 0.494353407167252 0.863056205828115 0.2180644 0.49515077 prediction 0.726112411656231 Functional Gain - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102065533 chr7:102065534 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_20027 0 0 1 0 1 chromatin 0.438718580024091 0.4387185801858 0 0 hPsi_site_13751 iPseU_CNN:0;iRNA_PseU:0 13752 chr17 72926903 72926903 1 + G A SKCM 72926902 + 72926882 72926922 41 CTACTCCATCGTGGCTGTGGTGGCGGGCACACCCCAGGACC CTACTCCATCGTGGCTGTGGTAGCGGGCACACCCCAGGACC < 41bp 0.470566191126816 0.863049277840575 0.18216124 0.391345 prediction 0.726098555681149 Functional Gain - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72926902 chr17:72926903 synonymous SNV . 0 22 hPsi_associated_SNPs_20028 0 0 0 0 0 exosome 0.43869750341315 0.438722633118026 0 0 hPsi_site_13752 iPseU_CNN:0;iRNA_PseU:0 13753 chr5 137735605 137735605 1 + G A HNSC 137735604 + 137735584 137735624 41 CGGGAGATGTGTGATGTGTGTGAAACAACTCTCTTCAACAT CGGGAGATGTGTGATGTGTGTAAAACAACTCTCTTCAACAT < 41bp 0.478726085655245 0.863044832817511 0.715303 0.9356945 prediction 0.726089665635022 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137735604 chr5:137735605 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20029 0 0 1 0 2 Nucleus 0.440700252683095 0.440994786472438 0.440783 0 hPsi_site_13753 iPseU_CNN:0.440783;iRNA_PseU:0 13754 chr17 8215530 8215530 1 + G A STAD 8215529 + 8215509 8215549 41 ATGATGCACCAACCCCAATGTGCACCCCCATCTTCTGGGAG ATGATGCACCAACCCCAATGTACACCCCCATCTTCTGGGAG < 41bp 0.463429887063611 0.863043047705354 0.24752012 0.6074249 prediction 0.726086095410708 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8215529 chr17:8215530 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_20030 0 0 0 0 0 exosome 0.438718589358875 0.438718586092632 0.2148498 0 hPsi_site_13754 iPseU_CNN:0.2148498;iRNA_PseU:0 13755 chr3 193854451 193854451 1 + G A BLCA 193854450 + 193854430 193854470 41 AGACGAAGAGCAAGAATAAATGAAAGTCTGAGCCAGCTGAA AGACGAAGAGCAAGAATAAATAAAAGTCTGAGCCAGCTGAA < 41bp 0.504334735089615 0.867355825508235 0.32484663 0.49241668 prediction 0.726042180837239 Functional Gain - HES1 ENSG00000114315 CDS Human protein_coding chr3:193854450 chr3:193854451 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20031 0 0 1 0 2 Cytosol 0.434952402341679 0.432952126941879 0 0 hPsi_site_13755 iPseU_CNN:0;iRNA_PseU:0 13756 chr6 47776033 47776033 1 + G A UCEC 47776032 + 47776012 47776052 41 ACTTGCAAAATCTGCAGCGATGTACAATCCCATCATTTACC ACTTGCAAAATCTGCAGCGATATACAATCCCATCATTTACC < 41bp 0.508026187573195 0.8710457037601 0.1378195 0.31215203 prediction 0.72603903237381 Functional Gain - OPN5 ENSG00000124818 CDS Human protein_coding chr6:47776032 chr6:47776033 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20032 0 0 0 0 1 exosome 0.438803551123203 0.438720040730127 0 0 hPsi_site_13756 iPseU_CNN:0;iRNA_PseU:0 13757 chr19 36223940 36223940 1 + G A UCEC 36223939 + 36223919 36223959 41 GCTGACCCCACCCGCACATTTGCCTGGCTCCCAGGGGCCCC GCTGACCCCACCCGCACATTTACCTGGCTCCCAGGGGCCCC < 41bp 0.488117239001305 0.863010328602697 0.5568042 0.86938787 prediction 0.726020657205394 Functional Gain - KMT2B ENSG00000272333 CDS Human protein_coding chr19:36223939 chr19:36223940 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_20033 0 0 1 0 0 chromatin 0.438718592996882 0.438718593064143 0.62516734 0 hPsi_site_13757 iPseU_CNN:0.62516734;iRNA_PseU:0 13758 chr5 173531271 173531271 1 + G A READ 173531270 + 173531250 173531290 41 TGGCCCTAGCTTTCCTTGCGTGCATCGTGTTCCTGGTGGTT TGGCCCTAGCTTTCCTTGCGTACATCGTGTTCCTGGTGGTT < 41bp 0.518432555862992 0.881439511329523 0.4579352 0.902339 prediction 0.726013910933063 Functional Gain - HMP19 ENSG00000170091 CDS Human protein_coding chr5:173531270 chr5:173531271 nonsynonymous SNV 0.945 4 22 hPsi_associated_SNPs_20034 0 0 0 0 2 exosome 0.438821779605589 0.438409423407036 0.804678 0 hPsi_site_13758 iPseU_CNN:0.804678;iRNA_PseU:0 13759 chr3 13544474 13544474 1 + G A UCEC 13544473 + 13544453 13544493 41 ATCTACCCAGGGGACCGCTTTGCCAAGCGTAAGCTGCTGCC ATCTACCCAGGGGACCGCTTTACCAAGCGTAAGCTGCTGCC < 41bp 0.520688646109961 0.883685982346002 0.35958022 0.39455435 prediction 0.725994672472083 Functional Gain - HDAC11 ENSG00000163517 CDS Human protein_coding chr3:13544473 chr3:13544474 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_20035 0 0 1 0 1 Cytosol 0.43871857523415 0.438718954105005 0 0 hPsi_site_13759 iPseU_CNN:0;iRNA_PseU:0 13760 chr19 55494041 55494041 1 + G A SKCM 55494040 + 55494020 55494060 41 GGGGAGTTTGCTGAACAGGGTGATGTTACCCAAGGCCGCCC GGGGAGTTTGCTGAACAGGGTAATGTTACCCAAGGCCGCCC < 41bp 0.469898870126094 0.862996019819687 0.26698875 0.6775661 prediction 0.725992039639374 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494040 chr19:55494041 synonymous SNV . 0 22 hPsi_associated_SNPs_20036 0 0 1 0 0 Cytosol 0.438718605551381 0.438719309810528 0.3551322 0 hPsi_site_13760 iPseU_CNN:0.3551322;iRNA_PseU:0 13761 chr20 44445364 44445364 1 + G A LAML 44445363 + 44445343 44445383 41 TCCAGCTTTTAAGAAGTACCTGCAAGAAACCTACTCAAAGC TCCAGCTTTTAAGAAGTACCTACAAGAAACCTACTCAAAGC < 41bp 0.493274484430638 0.862985377755416 0.5270282 0.81969607 prediction 0.725970755510832 Functional Gain - UBE2C ENSG00000175063 CDS Human protein_coding chr20:44445363 chr20:44445364 synonymous SNV . 0 22 hPsi_associated_SNPs_20037 0 0 1 0 1 exosome 0.438526351879446 0.438743082181965 0.58533574 0 hPsi_site_13761 iPseU_CNN:0.58533574;iRNA_PseU:0 13762 chr16 56782199 56782199 1 + G A BRCA 56782198 + 56782178 56782218 41 GGTGAGCTCCTTCAGCAAGCTGAACAGCTTGCTGCTGAGAC GGTGAGCTCCTTCAGCAAGCTAAACAGCTTGCTGCTGAGAC < 41bp 0.500707027915904 0.86368170148437 0.24436781 0.29266724 prediction 0.725949347136931 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56782198 chr16:56782199 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20038 0 0 1 0 1 Nucleus 0.438813254005768 0.438398755192964 0 0 hPsi_site_13762 iPseU_CNN:0;iRNA_PseU:0 13763 chr14 102028596 102028596 1 + G A OV 102028595 + 102028575 102028615 41 AACTCCAGCAGCTCGGCCTATGGCGCCTACTTCGAGCGTCT AACTCCAGCAGCTCGGCCTATAGCGCCTACTTCGAGCGTCT < 41bp 0.506821088926623 0.869781917425087 0.20350942 0.4101487 prediction 0.725921656996928 Functional Gain - DIO3 ENSG00000197406 CDS Human protein_coding chr14:102028595 chr14:102028596 unknown 0.461 2 22 hPsi_associated_SNPs_20039 0 0 0 0 0 Endoplasmic reticulum 0.438718592995102 0.438718592995079 0 0 hPsi_site_13763 iPseU_CNN:0;iRNA_PseU:0 13764 chr9 113562875 113562875 1 + G A SKCM 113562874 + 113562854 113562894 41 GGTGGGCGAGAACATGGTGGTGAAAATTGCCGACTTTGGCC GGTGGGCGAGAACATGGTGGTAAAAATTGCCGACTTTGGCC < 41bp 0.518688201316747 0.88163065487743 0.3092364 0.7628951 prediction 0.725884907121365 Functional Gain - MUSK ENSG00000030304 CDS Human protein_coding chr9:113562874 chr9:113562875 synonymous SNV . 0 22 hPsi_associated_SNPs_20040 0 0 0 0 0 exosome 0.438717040773924 0.438718592995102 0.5257902 0 hPsi_site_13764 iPseU_CNN:0.5257902;iRNA_PseU:0 13765 chr7 65557585 65557585 1 + G A rs371336813 65557584 + 65557564 65557604 41 CGAGGCCTCCGGGAAAGCTGTGTTCATGGCCGAGACCAAGG CGAGGCCTCCGGGAAAGCTGTATTCATGGCCGAGACCAAGG < 41bp 0.469604664421844 0.862941634169778 0.5932722 0.883174 prediction 0.725883268339556 Functional Gain - ASL ENSG00000126522;ENSG00000249319 CDS Human other chr7:65557584 chr7:65557585 synonymous SNV . 0 22 hPsi_associated_SNPs_20041 0 0 0 0 2 Ribosome 0.438708098742329 0.43870771176404 0.5798036 0 hPsi_site_13765 iPseU_CNN:0.5798036;iRNA_PseU:0 13766 chr3 133191275 133191275 1 + G A SKCM 133191274 + 133191254 133191294 41 GGGCGCTGTGGTCGGCCGGCTGGAGGCGGAGCTCAGGGAAA GGGCGCTGTGGTCGGCCGGCTAGAGGCGGAGCTCAGGGAAA < 41bp 0.513623182295829 0.876549218094767 0.30317008 0.73425204 prediction 0.725852071597877 Functional Gain - BFSP2 ENSG00000170819 CDS Human protein_coding chr3:133191274 chr3:133191275 synonymous SNV . 0 22 hPsi_associated_SNPs_20042 0 0 0 0 1 exosome 0.438718619793266 0.439803122299391 0.46850408 0 hPsi_site_13766 iPseU_CNN:0.46850408;iRNA_PseU:0 13767 chr17 7483177 7483177 1 + G A UCEC 7483176 + 7483156 7483196 41 CAAAAAATCAGCTACTTTGCTGCCATCCTTCACGGTGACAC CAAAAAATCAGCTACTTTGCTACCATCCTTCACGGTGACAC < 41bp 0.507773692325005 0.870694517017495 0.5182485 0.7926779 prediction 0.72584164938498 Functional Gain - CD68 ENSG00000129226 CDS Human protein_coding chr17:7483176 chr17:7483177 synonymous SNV . 0 22 hPsi_associated_SNPs_20043 0 0 1 0 1 Endoplasmic reticulum 0.438813735545915 0.438720164758327 0.5488588 0 hPsi_site_13767 iPseU_CNN:0.5488588;iRNA_PseU:0 13768 chr17 74557433 74557433 1 + G A SARC 74557432 + 74557412 74557452 41 AGTAGCCACGGTGTGGCAGCTGCTCTGAACCAGGACCTGGA AGTAGCCACGGTGTGGCAGCTACTCTGAACCAGGACCTGGA < 41bp 0.50426229540473 0.867182917196336 0.2442475 0.67355716 prediction 0.725841243583211 Functional Gain - SNHG16 ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557432 chr17:74557433 . . 0 22 hPsi_associated_SNPs_20044 0 0 1 0 3 unknown 0.438695977181465 0.438215574489503 0.34711432 0 hPsi_site_13768 iPseU_CNN:0.34711432;iRNA_PseU:0 13769 chr1 152760055 152760055 1 + G A BLCA 152760054 + 152760034 152760074 41 CGTCACAGACCCCAGAGCTCTGACTGCTGCAGCCAGCCCTC CGTCACAGACCCCAGAGCTCTAACTGCTGCAGCCAGCCCTC < 41bp 0.485886861912138 0.862910128615069 0.16412932 0.36637753 prediction 0.725820257230138 Functional Gain - LCE1E ENSG00000186226 CDS Human protein_coding chr1:152760054 chr1:152760055 nonsynonymous SNV 0.490 0 22 hPsi_associated_SNPs_20045 0 0 0 0 0 unknown 0.439204269177252 0.437856459041048 0 0 hPsi_site_13769 iPseU_CNN:0;iRNA_PseU:0 13770 chrX 149905181 149905181 1 + G A UCEC 149905180 + 149905160 149905200 41 CTACGCAAATTAAAAGAGATTGTGTACCCTTCGATCGATGA CTACGCAAATTAAAAGAGATTATGTACCCTTCGATCGATGA < 41bp 0.491772375587995 0.862903333350171 0.38024193 0.3674665 prediction 0.725806666700342 Functional Gain - MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905180 chrX:149905181 nonsynonymous SNV 0.703 3 22 hPsi_associated_SNPs_20046 0 0 1 1 0 Ribosome 0.438708964211167 0.438719545091507 0 0 hPsi_site_13770 iPseU_CNN:0;iRNA_PseU:0 13771 chr3 50222084 50222084 1 + G A OV 50222083 + 50222063 50222103 41 CAAGGATTATCCTGATGAGGTGATCAACTTCATGCGCAGCC CAAGGATTATCCTGATGAGGTAATCAACTTCATGCGCAGCC < 41bp 0.521635873072352 0.884518646117525 0.33060575 0.59457874 prediction 0.725765546090348 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50222083 chr3:50222084 synonymous SNV . 0 22 hPsi_associated_SNPs_20047 0 0 0 0 1 Endoplasmic reticulum 0.438718052723625 0.4386501785663 0.18915748 0 hPsi_site_13771 iPseU_CNN:0.18915748;iRNA_PseU:0 13772 chr3 26751814 26751814 1 + G A SKCM 26751813 + 26751793 26751833 41 GTTTGGCTGGTTCACTATGGTGATCTCATATGTGGTATATT GTTTGGCTGGTTCACTATGGTAATCTCATATGTGGTATATT < 41bp 0.489848963570981 0.862873742375771 0.4718065 0.86111534 prediction 0.725747484751542 Functional Gain - LRRC3B ENSG00000179796 CDS Human protein_coding chr3:26751813 chr3:26751814 synonymous SNV . 0 22 hPsi_associated_SNPs_20048 0 0 0 0 0 exosome 0.438718592993625 0.438718592993938 0.72223068 0 hPsi_site_13772 iPseU_CNN:0.72223068;iRNA_PseU:0 13773 chr9 35609354 35609354 1 + G A rs79161336 35609353 + 35609333 35609373 41 CAGACAACTTCATCAGCACCTGTTCCTCGGCCTCCCAACCC CAGACAACTTCATCAGCACCTATTCCTCGGCCTCCCAACCC < 41bp 0.485059984082061 0.862855906711784 0.3090037 0.72324336 prediction 0.725711813423568 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35609353 chr9:35609354 nonsynonymous SNV 0.877 3 22 hPsi_associated_SNPs_20049 0 0 1 0 0 Cytosol 0.438716565757053 0.438719672215258 0.44648672 0 hPsi_site_13773 iPseU_CNN:0.44648672;iRNA_PseU:0 13774 chr17 66041992 66041992 1 + G A rs1064414 66041991 + 66041971 66042011 41 AAACCATGAAAATGAGTCTGTGTATAAGGCTTCGTTAAGCT AAACCATGAAAATGAGTCTGTATATAAGGCTTCGTTAAGCT < 41bp 0.495401397743235 0.862852917544522 0.2611639 0.6226139 prediction 0.725705835089043 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66041991 chr17:66041992 synonymous SNV . 0 22 hPsi_associated_SNPs_20050 0 0 1 0 1 Cytosol 0.438833970107653 0.438705872435176 0.2452278 0 hPsi_site_13774 iPseU_CNN:0.2452278;iRNA_PseU:0 13775 chr17 40955697 40955697 1 + G A SARC 40955696 + 40955676 40955716 41 AAATCTGTGAGCTACCAGGCTGTAGAAATCCTAGAAAGGTA AAATCTGTGAGCTACCAGGCTATAGAAATCCTAGAAAGGTA < 41bp 0.510316831707088 0.873163500128583 0.5497626 0.8015328 prediction 0.725693336842991 Functional Gain - CNTD1 ENSG00000176563 CDS Human protein_coding chr17:40955696 chr17:40955697 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20051 0 0 0 0 1 Cytosol 0.438718588883272 0.438718592985365 0.5035404 0 hPsi_site_13775 iPseU_CNN:0.5035404;iRNA_PseU:0 13776 chr2 155566136 155566136 1 + G A LUSC 155566135 + 155566115 155566155 41 TCTCGGCAGACACCTGAGGGTGAGTTCCTTCCCCTTGACCA TCTCGGCAGACACCTGAGGGTAAGTTCCTTCCCCTTGACCA < 41bp 0.48930772305815 0.862835494430435 0.33216274 0.76604307 prediction 0.725670988860869 Functional Gain - KCNJ3 ENSG00000162989 CDS Human protein_coding chr2:155566135 chr2:155566136 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20052 0 0 0 0 1 exosome 0.438581743746094 0.438716485021781 0.53208614 0 hPsi_site_13776 iPseU_CNN:0.53208614;iRNA_PseU:0 13777 chr10 104160229 104160229 1 + G A COAD 104160228 + 104160208 104160248 41 TCCTGCTGTGCCCCAGCTGTTGCATATGCCTGACTTTGAGG TCCTGCTGTGCCCCAGCTGTTACATATGCCTGACTTTGAGG < 41bp 0.517687604401263 0.880502116739241 0.32577446 0.6349906 prediction 0.725629024675957 Functional Gain - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160228 chr10:104160229 synonymous SNV . 0 22 hPsi_associated_SNPs_20053 0 0 1 0 0 chromatin 0.43871816478372 0.438717617047744 0.2699812 0 hPsi_site_13777 iPseU_CNN:0.2699812;iRNA_PseU:0 13778 chr22 29684723 29684723 1 + G A BLCA 29684722 + 29684702 29684742 41 GGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAG GGCAGGGGAAGAGGGGGATTTAATCGTGGAGGCATGAGCAG < 41bp 0.504955547044027 0.86776111785677 0.20089176 0.63119537 prediction 0.725611141625487 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29684722 chr22:29684723 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20054 0 0 1 0 1 Cytosol 0.438718592995074 0.438717469680152 0.26239074 0 hPsi_site_13778 iPseU_CNN:0.26239074;iRNA_PseU:0 13779 chr5 72427510 72427510 1 + G A STAD 72427509 + 72427489 72427529 41 AGATATGAAGAAAAAGAAAATGCTGCAGCTACATTCTTGCC AGATATGAAGAAAAAGAAAATACTGCAGCTACATTCTTGCC < 41bp 0.505037408819255 0.867818032068593 0.2644282 0.28863007 prediction 0.725561246498676 Functional Gain - TMEM171 ENSG00000157111 CDS Human protein_coding chr5:72427509 chr5:72427510 nonsynonymous SNV 0.048 0 22 hPsi_associated_SNPs_20055 0 0 0 0 0 Ribosome 0.438783632228422 0.438749767527426 0 0 hPsi_site_13779 iPseU_CNN:0;iRNA_PseU:0 13780 chr20 408089 408089 1 + G A LUSC 408088 + 408068 408108 41 TTCTTTGAGGATGATGTCAATGAGTTCACCTGCCCTGTGTG TTCTTTGAGGATGATGTCAATAAGTTCACCTGCCCTGTGTG < 41bp 0.511373092111742 0.874145927558662 0.34494862 0.48022696 prediction 0.725545670893842 Functional Gain - RBCK1 ENSG00000125826 CDS Human protein_coding chr20:408088 chr20:408089 nonsynonymous SNV 0.973 2 22 hPsi_associated_SNPs_20056 0 0 1 1 1 Ribosome 0.43878499853961 0.438694960482719 0 0 hPsi_site_13780 iPseU_CNN:0;iRNA_PseU:0 13781 chr5 40852427 40852427 1 + G A SKCM 40852426 + 40852406 40852446 41 CTTAGCCTGGAATTTCCTGATGAAAGTTCAAGCACGAGATG CTTAGCCTGGAATTTCCTGATAAAAGTTCAAGCACGAGATG < 41bp 0.498967534594065 0.862753257039248 0.21393454 0.2786658 prediction 0.725506514078495 Functional Gain - CARD6 ENSG00000132357 CDS Human protein_coding chr5:40852426 chr5:40852427 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_20057 0 0 0 0 0 exosome 0.438718453600591 0.438718514531552 0 0 hPsi_site_13781 iPseU_CNN:0;iRNA_PseU:0 13782 chr1 57158141 57158141 1 + G A SKCM 57158140 + 57158120 57158160 41 GAAACCAGAGAATGTCCTGTTGGATGCACACATGAATGCCA GAAACCAGAGAATGTCCTGTTAGATGCACACATGAATGCCA < 41bp 0.50691029021619 0.869635459639352 0.25489587 0.41039968 prediction 0.725450338846324 Functional Gain - PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57158140 chr1:57158141 synonymous SNV . 0 22 hPsi_associated_SNPs_20058 0 0 1 0 1 Endoplasmic reticulum 0.439041345872802 0.438627549973492 0 0 hPsi_site_13782 iPseU_CNN:0;iRNA_PseU:0 13783 chr5 44812066 44812066 1 + G A LUSC 44812065 + 44812045 44812085 41 TAGAAATCCCCACTATAAAATGTAAACCAGACAAACTTCCA TAGAAATCCCCACTATAAAATATAAACCAGACAAACTTCCA < 41bp 0.486229883628546 0.862716984407714 0.31532824 0.56239164 prediction 0.725433968815428 Functional Gain - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44812065 chr5:44812066 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20059 0 0 1 0 2 Ribosome 0.438747471580649 0.438725910013699 0.12478328 0 hPsi_site_13783 iPseU_CNN:0.12478328;iRNA_PseU:0 13784 chr3 148872966 148872966 1 + G A CESC 148872965 + 148872945 148872985 41 TGGGTGGAATTTGTATATTGTGAATACGATCTCACCAGTGC TGGGTGGAATTTGTATATTGTAAATACGATCTCACCAGTGC < 41bp 0.514462719352595 0.877170472706299 0.33048475 0.47805333 prediction 0.725415506707408 Functional Gain - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148872965 chr3:148872966 synonymous SNV . 0 22 hPsi_associated_SNPs_20060 0 0 0 0 2 Ribosome 0.413648869538972 0.443112726107555 0 0 hPsi_site_13784 iPseU_CNN:0;iRNA_PseU:0 13785 chr12 6426748 6426748 1 + G A UCEC 6426747 + 6426727 6426767 41 CAAGCGCTCTGGGAGGCAGATGCTCTGTGACTTGCTTATCA CAAGCGCTCTGGGAGGCAGATACTCTGTGACTTGCTTATCA < 41bp 0.471843634557786 0.86270101160364 0.2551828 0.61426103 prediction 0.725402023207279 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6426747 chr12:6426748 nonsynonymous SNV 0.907 1 22 hPsi_associated_SNPs_20061 0 0 0 0 1 Nucleus 0.438718560186131 0.438717596472374 0.22852206 0 hPsi_site_13785 iPseU_CNN:0.22852206;iRNA_PseU:0 13786 chr3 9759820 9759820 1 + G A SKCM 9759819 + 9759799 9759839 41 ATCATCCAGGACTATGACAGTGATAAGCTCTTCCCAGCTTA ATCATCCAGGACTATGACAGTAATAAGCTCTTCCCAGCTTA < 41bp 0.478686741945646 0.862665931198119 0.23791167 0.31142172 prediction 0.725331862396238 Functional Gain - CPNE9 ENSG00000144550 CDS Human protein_coding chr3:9759819 chr3:9759820 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20062 0 0 0 0 1 exosome 0.438718592995094 0.438718593030772 0 0 hPsi_site_13786 iPseU_CNN:0;iRNA_PseU:0 13787 chr11 94597990 94597990 1 + G A UCEC 94597989 + 94597969 94598009 41 GCAAGAGGAGGAGGAGGTGGTGCAGGCCAACAGAAGGTGTC GCAAGAGGAGGAGGAGGTGGTACAGGCCAACAGAAGGTGTC < 41bp 0.525149263530874 0.887812836857032 0.28875118 0.57426184 prediction 0.725327146652314 Functional Gain - AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94597989 chr11:94597990 synonymous SNV . 0 22 hPsi_associated_SNPs_20063 0 0 1 0 2 chromatin 0.438718569663058 0.438718587792949 0.14852368 0 hPsi_site_13787 iPseU_CNN:0.14852368;iRNA_PseU:0 13788 chr19 18120606 18120606 1 + G A rs151273577 18120605 + 18120585 18120625 41 GCTGCAGGAGAGGTCATCCCTGTCTTTGCCGAGATCGACAA GCTGCAGGAGAGGTCATCCCTATCTTTGCCGAGATCGACAA < 41bp 0.481012695185923 0.862655064230172 0.284151 0.33978987 prediction 0.725310128460344 Functional Gain - ARRDC2 ENSG00000105643 CDS Human protein_coding chr19:18120605 chr19:18120606 nonsynonymous SNV 0.140 0 22 hPsi_associated_SNPs_20064 0 0 1 0 1 cytosol 0.435048396545697 0.438561104571571 0 0 hPsi_site_13788 iPseU_CNN:0;iRNA_PseU:0 13789 chr12 49745241 49745241 1 + G A SKCM 49745240 + 49745220 49745260 41 CTGGAGATCCAGGCTGCGTATGAAGTCCTGAGTCAACCCAG CTGGAGATCCAGGCTGCGTATAAAGTCCTGAGTCAACCCAG < 41bp 0.49935246452217 0.862650372991569 0.4170185 0.60810167 prediction 0.725300745983138 Functional Gain - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49745240 chr12:49745241 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_20065 0 0 0 0 0 Ribosome 0.438718594272838 0.438718479305322 0.21620334 0 hPsi_site_13789 iPseU_CNN:0.21620334;iRNA_PseU:0 13790 chr17 26800805 26800805 1 + G A SKCM 26800804 + 26800784 26800824 41 CTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCC CTTCGTGCCCATTCTCCTGCTACCTCTGCCCATCCTCGTCC < 41bp 0.500248586213663 0.862895999295531 0.17816785 0.3531864 prediction 0.725294826163736 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26800804 chr17:26800805 synonymous SNV . 0 22 hPsi_associated_SNPs_20066 0 0 0 0 1 unknown 0.438718602219199 0.438718495034158 0 0 hPsi_site_13790 iPseU_CNN:0;iRNA_PseU:0 13791 chr16 85942679 85942679 1 + G A SKCM 85942678 + 85942658 85942698 41 GACGAGGTTACGCTGTGCTTTGAATAAGAGCCCAGATTTTG GACGAGGTTACGCTGTGCTTTAAATAAGAGCCCAGATTTTG < 41bp 0.46785267789013 0.862643788143314 0.25999355 0.39478981 prediction 0.725287576286628 Functional Gain - IRF8 ENSG00000140968 CDS Human protein_coding chr16:85942678 chr16:85942679 synonymous SNV . 0 22 hPsi_associated_SNPs_20067 0 0 0 0 1 Endoplasmic reticulum 0.438718594032059 0.438718707414489 0 0 hPsi_site_13791 iPseU_CNN:0;iRNA_PseU:0 Coronary artery disease 13792 chr16 57719834 57719834 1 + G A STAD 57719833 + 57719813 57719853 41 CTTTGCACTTTTCAACTCCTTGCAAGGTGAGGCCCCTGCAC CTTTGCACTTTTCAACTCCTTACAAGGTGAGGCCCCTGCAC < 41bp 0.488522321621008 0.862634421515542 0.34322363 0.80732656 prediction 0.725268843031084 Functional Gain - ADGRG3 ENSG00000182885 CDS Human protein_coding chr16:57719833 chr16:57719834 synonymous SNV . 0 22 hPsi_associated_SNPs_20068 0 0 0 1 1 Nucleus 0.438801675579928 0.438711377546445 0.61465312 0 hPsi_site_13792 iPseU_CNN:0.61465312;iRNA_PseU:0 13793 chr5 140482211 140482211 1 + G A LUAD 140482210 + 140482190 140482230 41 TCGGCCACCGCCACGCTGCATGTGCTCCTGGTGGACGGCTT TCGGCCACCGCCACGCTGCATATGCTCCTGGTGGACGGCTT < 41bp 0.499389850143471 0.862632242860375 0.23296022 0.5312985 prediction 0.72526448572075 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140482210 chr5:140482211 nonsynonymous SNV 0.340 3 22 hPsi_associated_SNPs_20069 0 0 0 0 0 exosome 0.4386931183316 0.43801739449408 0.062597 0 hPsi_site_13793 iPseU_CNN:0.062597;iRNA_PseU:0 13794 chrX 100667669 100667669 1 + G A BLCA 100667668 + 100667648 100667688 41 AGGAGCTGGGTTTGAAAGGATGAGGCGTGGTGCCTATGGTG AGGAGCTGGGTTTGAAAGGATAAGGCGTGGTGCCTATGGTG < 41bp 0.505951725269021 0.868556521045567 0.24800503 0.29743278 prediction 0.725209591553093 Functional Gain - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667668 chrX:100667669 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20070 0 0 1 0 0 Cytosol 0.438707999130762 0.438685227869305 0 0 hPsi_site_13794 iPseU_CNN:0;iRNA_PseU:0 13795 chr7 99799849 99799849 1 + G A SKCM 99799848 + 99799828 99799868 41 TTTAGCCCTCAGATGATTGTTGGGGGCCGTGATTTCCTTAG TTTAGCCCTCAGATGATTGTTAGGGGCCGTGATTTCCTTAG < 41bp 0.475590817144394 0.862603957928258 0.26524383 0.39701176 prediction 0.725207915856515 Functional Gain - STAG3 ENSG00000066923 CDS Human protein_coding chr7:99799848 chr7:99799849 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_20071 0 0 1 0 1 exosome 0.438718609321801 0.438670229007481 0 0 hPsi_site_13795 iPseU_CNN:0;iRNA_PseU:0 13796 chr3 52454998 52454998 1 + G A HNSC 52454997 + 52454977 52455017 41 GAAAGCTGCATCTTATGTTGTGAAGACTTATCCCAACAGAG GAAAGCTGCATCTTATGTTGTAAAGACTTATCCCAACAGAG < 41bp 0.469968870653336 0.862589163595824 0.25943637 0.29439706 prediction 0.725178327191649 Functional Gain - PHF7 ENSG00000010318 CDS Human protein_coding chr3:52454997 chr3:52454998 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_20072 0 0 0 0 2 cytosol 0.438711200744062 0.438646776359408 0 0 hPsi_site_13796 iPseU_CNN:0;iRNA_PseU:0 13797 chr11 65386484 65386484 1 + G A COAD 65386483 + 65386463 65386503 41 GAGGCGCGAAGGGGACCCGCTGCCAACCAGCCCGGCTGGCG GAGGCGCGAAGGGGACCCGCTACCAACCAGCCCGGCTGGCG < 41bp 0.483476025501666 0.862577221477638 0.7276939 0.9368553 prediction 0.725154442955276 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65386483 chr11:65386484 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_20073 0 0 1 0 1 Ribosome 0.438704940422481 0.438724773350724 0.4183228 0 hPsi_site_13797 iPseU_CNN:0.4183228;iRNA_PseU:0 13798 chr16 87677937 87677937 1 + G A rs559568858 87677936 + 87677916 87677956 41 GCAGAGCGTCCCGTATGGCATGGCCGCGGTCATCCGCTCAC GCAGAGCGTCCCGTATGGCATAGCCGCGGTCATCCGCTCAC < 41bp 0.481395797930221 0.862574353394642 0.34421486 0.7238729 prediction 0.725148706789283 Functional Gain - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87677936 chr16:87677937 nonsynonymous SNV 0.961 2 22 hPsi_associated_SNPs_20074 0 0 0 0 1 chromatin 0.438725361484571 0.438534633664409 0.4477458 0 hPsi_site_13798 iPseU_CNN:0.4477458;iRNA_PseU:0 13799 chr16 84492924 84492924 1 + G A rs181099197 84492923 + 84492903 84492943 41 TCTGTCCACCGTGTTCAACCTGCCCAGCCCCCTCAACGCCA TCTGTCCACCGTGTTCAACCTACCCAGCCCCCTCAACGCCA < 41bp 0.474458417956626 0.862563232178926 0.20494619 0.39408478 prediction 0.725126464357853 Functional Gain - ATP2C2 ENSG00000064270 CDS Human protein_coding chr16:84492923 chr16:84492924 synonymous SNV . 0 22 hPsi_associated_SNPs_20075 0 0 0 0 2 Ribosome 0.438730613376509 0.43877031825405 0 0 hPsi_site_13799 iPseU_CNN:0;iRNA_PseU:0 13800 chr17 71193077 71193077 1 + G A PRAD 71193076 + 71193056 71193096 41 AAAGCAAGATGTTGCTCAAATGCCAAGGTGTGTCTGACCAA AAAGCAAGATGTTGCTCAAATACCAAGGTGTGTCTGACCAA < 41bp 0.511948906127827 0.874480700391763 0.19759494 0.28332788 prediction 0.725063588527872 Functional Gain - COG1 ENSG00000166685 CDS Human protein_coding chr17:71193076 chr17:71193077 nonsynonymous SNV 0.985 2 22 hPsi_associated_SNPs_20076 0 0 1 0 1 Nucleus 0.438424173687306 0.438360959077025 0 0 hPsi_site_13800 iPseU_CNN:0;iRNA_PseU:0 13801 chr16 29708617 29708617 1 + G A COAD 29708616 + 29708596 29708636 41 TGGACAACCTCCCCCAGTTCTGCGGGCCGCACATAGACGTC TGGACAACCTCCCCCAGTTCTACGGGCCGCACATAGACGTC < 41bp 0.480141509463219 0.862528301828676 0.33550116 0.6233214 prediction 0.725056603657352 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29708616 chr16:29708617 nonsynonymous SNV 0.925 3 22 hPsi_associated_SNPs_20077 0 0 1 0 1 Endoplasmic reticulum 0.439886687052898 0.438745911062727 0.2466428 0 hPsi_site_13801 iPseU_CNN:0.2466428;iRNA_PseU:0 13802 chr8 19809306 19809306 1 + G A rs551959021 19809305 + 19809285 19809325 41 AGGAATGTATGAGAGTTGGGTGCCAAAACTTGTGGCCGCCC AGGAATGTATGAGAGTTGGGTACCAAAACTTGTGGCCGCCC < 41bp 0.492767638716779 0.862522730211917 0.27923596 0.7785709 prediction 0.725045460423834 Functional Gain - LPL ENSG00000175445 CDS Human protein_coding chr8:19809305 chr8:19809306 synonymous SNV . 0 22 hPsi_associated_SNPs_20078 0 0 0 0 1 Endoplasmic reticulum 0.438718580935493 0.438718658779703 0.5571418 0 hPsi_site_13802 iPseU_CNN:0.5571418;iRNA_PseU:0 13803 chr7 103008039 103008039 1 + G A BLCA 103008038 + 103008018 103008058 41 GGGAGATTGGATAGAAAAATTGAATTTAGCTTGCCCGATCT GGGAGATTGGATAGAAAAATTAAATTTAGCTTGCCCGATCT < 41bp 0.500326915446972 0.86282394389305 0.3257057 0.41557392 prediction 0.724994056892156 Functional Gain - PSMC2 ENSG00000161057 CDS Human protein_coding chr7:103008038 chr7:103008039 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20079 0 0 1 0 1 Ribosome 0.438718592342396 0.438718592995066 0 0 hPsi_site_13803 iPseU_CNN:0;iRNA_PseU:0 13804 chr11 47283259 47283259 1 + G A CESC 47283258 + 47283238 47283278 41 GGAGGACCAGATTGCCCTGCTGAAGACCTCTGCGATCGAGG GGAGGACCAGATTGCCCTGCTAAAGACCTCTGCGATCGAGG < 41bp 0.513639378226945 0.876098212932979 0.34398317 0.6089011 prediction 0.724917669412067 Functional Gain - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47283258 chr11:47283259 synonymous SNV . 0 22 hPsi_associated_SNPs_20080 0 0 1 0 1 Ribosome 0.438715811372837 0.438718265857692 0.2178022 0 hPsi_site_13804 iPseU_CNN:0.2178022;iRNA_PseU:0 13805 chr21 31964947 31964947 1 + G A LUAD 31964946 + 31964926 31964966 41 GGACTGTGGCTATGGAGGCCTGGGCTGTGGCTATGGCTCCT GGACTGTGGCTATGGAGGCCTAGGCTGTGGCTATGGCTCCT < 41bp 0.502507156734886 0.864960647312077 0.21855122 0.30826133 prediction 0.724906981154382 Functional Gain - KRTAP6-3 ENSG00000212938 CDS Human protein_coding chr21:31964946 chr21:31964947 synonymous SNV . 0 22 hPsi_associated_SNPs_20081 0 0 0 0 0 unknown 0.438718590755247 0.438718542390269 0 0 hPsi_site_13805 iPseU_CNN:0;iRNA_PseU:0 13806 chr9 124521263 124521263 1 + G A PRAD 124521262 + 124521242 124521282 41 GGAGAACCTCCGGCGAGCGGTGCATCCCAACAAGGTAAGCC GGAGAACCTCCGGCGAGCGGTACATCCCAACAAGGTAAGCC < 41bp 0.474265594164221 0.862452500807015 0.6992253 0.9031699 prediction 0.724905001614029 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124521262 chr9:124521263 synonymous SNV . 0 22 hPsi_associated_SNPs_20082 0 0 1 0 2 Ribosome 0.438718486211254 0.438718296162536 0.4078892 0 hPsi_site_13806 iPseU_CNN:0.4078892;iRNA_PseU:0 13807 chr16 2028010 2028010 1 + G A LIHC 2028009 + 2027989 2028029 41 GAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGG GAAGCGGTACCTGCGGGCGCTAGGCCTGGCCATCTCCCTGG < 41bp 0.525533708025179 0.887981431594895 0.14256847 0.37048918 prediction 0.724895447139432 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2028009 chr16:2028010 synonymous SNV . 0 22 hPsi_associated_SNPs_20083 0 0 1 0 1 Nucleus 0.438761852531731 0.43871861762045 0 0 hPsi_site_13807 iPseU_CNN:0;iRNA_PseU:0 13808 chr13 88330388 88330388 1 + G A LUAD 88330387 + 88330367 88330407 41 CAGCAGGCTACGGGAACCGGTGCTCTACAGCCCCCCGAGTG CAGCAGGCTACGGGAACCGGTACTCTACAGCCCCCCGAGTG < 41bp 0.512880228305586 0.875320267544767 0.477618 0.9753619 prediction 0.724880078478363 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88330387 chr13:88330388 synonymous SNV . 0 22 hPsi_associated_SNPs_20084 0 0 1 0 0 nucleus 0.438717256272605 0.438721721302103 0.9507238 0 hPsi_site_13808 iPseU_CNN:0.9507238;iRNA_PseU:0 13809 chr5 52360814 52360814 1 + G A UCEC 52360813 + 52360793 52360833 41 ACTCGATTTGGTTCAGCAATTGCAGCTCTTTCAGACATCAA ACTCGATTTGGTTCAGCAATTACAGCTCTTTCAGACATCAA < 41bp 0.495704336447365 0.862434198676886 0.31043482 0.39976138 prediction 0.724868397353771 Functional Gain - ITGA2 ENSG00000164171 CDS Human protein_coding chr5:52360813 chr5:52360814 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20085 0 0 0 0 1 cytosol 0.43923559065166 0.439759946406211 0 0 hPsi_site_13809 iPseU_CNN:0;iRNA_PseU:0 13810 chr4 9784305 9784305 1 + G A BRCA 9784304 + 9784284 9784324 41 GACGTGAATGCAGAGAACTGTGACTCCAGCCTGAATCGAAC GACGTGAATGCAGAGAACTGTAACTCCAGCCTGAATCGAAC < 41bp 0.496191056651115 0.862418510896323 0.3102901 0.6460492 prediction 0.724837021792647 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784304 chr4:9784305 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_20086 0 0 0 0 0 unknown 0.438693770693533 0.438719171211778 0.2920984 0 hPsi_site_13810 iPseU_CNN:0.2920984;iRNA_PseU:0 13811 chr8 92092926 92092926 1 + G A rs143121527 92092925 + 92092905 92092945 41 CAGAAGTACTGTGAAGATATTGTAAACACAGCTGCATGGGG CAGAAGTACTGTGAAGATATTATAAACACAGCTGCATGGGG < 41bp 0.502716656365904 0.865132043393356 0.28035486 0.43804562 prediction 0.724830774054905 Functional Gain - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92092925 chr8:92092926 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_20087 0 0 1 0 2 Ribosome 0.438722359805433 0.438723844109915 0 0 hPsi_site_13811 iPseU_CNN:0;iRNA_PseU:0 13812 chr16 69354105 69354105 1 + G A HNSC 69354104 + 69354084 69354124 41 CCCTCCATCATCTTCATCGATGAGGTGGATTCCCTCTGCGG CCCTCCATCATCTTCATCGATAAGGTGGATTCCCTCTGCGG < 41bp 0.515465720329896 0.877879935756948 0.61695594 0.7797513 prediction 0.724828430854104 Functional Gain - VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69354104 chr16:69354105 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_20088 0 0 1 0 1 Cytosol 0.438735164852592 0.438718499557239 0.32559072 0 hPsi_site_13812 iPseU_CNN:0.32559072;iRNA_PseU:0 13813 chr11 5653757 5653757 1 + G A LUSC 5653756 + 5653736 5653776 41 TGTGGTATCAGTTACTCATTTGAACATCTACAGGCTAATCA TGTGGTATCAGTTACTCATTTAAACATCTACAGGCTAATCA < 41bp 0.484133796419691 0.862413374449754 0.36664438 0.55781376 prediction 0.724826748899509 Functional Gain - TRIM34;TRIM6-TRIM34 ENSG00000258588;ENSG00000258659 CDS Human other chr11:5653756 chr11:5653757 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20089 0 0 0 0 0 unknown 0.440051487757422 0.444794284183745 0.11562752 0 hPsi_site_13813 iPseU_CNN:0.11562752;iRNA_PseU:0 13814 chr16 85120723 85120723 1 + G A rs139483361 85120722 + 85120702 85120742 41 CTTTGGACTGAACAAGAAGCTGTGCAATGACTTCCTGAAGA CTTTGGACTGAACAAGAAGCTATGCAATGACTTCCTGAAGA < 41bp 0.476440628565866 0.862406301202593 0.19681945 0.20980689 prediction 0.724812602405185 Functional Gain - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85120722 chr16:85120723 synonymous SNV . 0 22 hPsi_associated_SNPs_20090 0 0 0 0 2 Nucleus 0.438652840321137 0.438647850149986 0 0 hPsi_site_13814 iPseU_CNN:0;iRNA_PseU:0 13815 chr2 182374391 182374391 1 + G A HNSC 182374390 + 182374370 182374410 41 GGTTATTTTCCTTAGAAAGATGTGCGGGACATCCTCACCCC GGTTATTTTCCTTAGAAAGATATGCGGGACATCCTCACCCC < 41bp 0.498654830510158 0.862402741715765 0.6260545 0.6764943 prediction 0.724805483431529 Functional Gain - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182374390 chr2:182374391 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_20091 0 0 0 0 1 exosome 0.437859011343108 0.438704095898533 0.1008796 0 hPsi_site_13815 iPseU_CNN:0.1008796;iRNA_PseU:0 13816 chr7 6639953 6639953 1 + G A rs34300529 6639952 + 6639932 6639972 41 GCTGGCGCAGGCTCTGCAGGTGGCCATGGCCTCAGGAGCTC GCTGGCGCAGGCTCTGCAGGTAGCCATGGCCTCAGGAGCTC < 41bp 0.519250342846035 0.881650385813581 0.20891386 0.6392392 prediction 0.724800085935092 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6639952 chr7:6639953 synonymous SNV . 0 22 hPsi_associated_SNPs_20092 0 0 0 0 1 chromatin 0.438718595423107 0.438975234239873 0.2784784 0 hPsi_site_13816 iPseU_CNN:0.2784784;iRNA_PseU:0 13817 chr21 42613817 42613817 1 + G A LUSC 42613816 + 42613796 42613836 41 CATCCCCAACGTTTTCTCCATGCAGATGTGTGGAGCCGGCT CATCCCCAACGTTTTCTCCATACAGATGTGTGGAGCCGGCT < 41bp 0.468107294612088 0.862395874801934 0.29290223 0.31066734 prediction 0.724791749603868 Functional Gain - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42613816 chr21:42613817 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20093 0 0 1 0 2 Ribosome 0.438716807036088 0.438720065357767 0 0 hPsi_site_13817 iPseU_CNN:0;iRNA_PseU:0 13818 chr10 90695041 90695041 1 + C T SKCM 90695042 - 90695022 90695062 41 TGTCCACCTTCCAGCAGATGTGGATCAGCAAACAGGAATAC TGTCCACCTTCCAGCAGATGTAGATCAGCAAACAGGAATAC < 41bp 0.516510408530485 0.878904590207448 0.21212706 0.26728338 prediction 0.724788363353926 Functional Gain - ACTA2 ENSG00000107796 CDS Human protein_coding chr10:90695042 chr10:90695041 stopgain 1.000 1 22 hPsi_associated_SNPs_20094 0 0 0 0 1 Ribosome 0.43871882215546 0.438721475287577 0 0 hPsi_site_13818 iPseU_CNN:0;iRNA_PseU:0 13819 chr19 7614869 7614869 1 + G A CESC 7614868 + 7614848 7614888 41 TCGACAAGGCGGAGGACGTGTGCCTGTTCGTAGCGCAGCCC TCGACAAGGCGGAGGACGTGTACCTGTTCGTAGCGCAGCCC < 41bp 0.517026220751155 0.879408470753337 0.23699483 0.6246781 prediction 0.724764500004363 Functional Gain - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7614868 chr19:7614869 nonsynonymous SNV 0.088 2 22 hPsi_associated_SNPs_20095 0 0 0 0 1 Ribosome 0.438711956323425 0.43855558165318 0.2493562 0 hPsi_site_13819 iPseU_CNN:0.2493562;iRNA_PseU:0 13820 chr16 71674726 71674726 1 + C T STAD 71674727 - 71674707 71674747 41 GTCCATCCAGGTGAGACCCTTGCGGGCATAGAGCCTCTCTC GTCCATCCAGGTGAGACCCTTACGGGCATAGAGCCTCTCTC < 41bp 0.495591040802732 0.862380471560265 0.22825646 0.49821135 prediction 0.72476094312053 Functional Gain - MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71674727 chr16:71674726 synonymous SNV . 0 22 hPsi_associated_SNPs_20096 0 0 0 0 0 Ribosome 0.438720259701714 0.438722466302318 0 0 hPsi_site_13820 iPseU_CNN:0;iRNA_PseU:0 13821 chr5 140573811 140573811 1 + G A HNSC 140573810 + 140573790 140573830 41 CGACAACTCGCCCTTCGTGCTGTACCCGCTGCAGAACGGCT CGACAACTCGCCCTTCGTGCTATACCCGCTGCAGAACGGCT < 41bp 0.502595645164525 0.864970461065485 0.40089393 0.9660462 prediction 0.724749631801919 Functional Gain - PCDHB10 ENSG00000120324 CDS Human protein_coding chr5:140573810 chr5:140573811 synonymous SNV . 0 22 hPsi_associated_SNPs_20097 0 0 0 0 0 exosome 0.438737741365434 0.438732890952227 0.9320924 0 hPsi_site_13821 iPseU_CNN:0.9320924;iRNA_PseU:0 13822 chr5 121188116 121188116 1 + G A SKCM 121188115 + 121188095 121188135 41 AGAAGCCGGAACAGGACGACTGGGAAAGCGGGCTGCATGCC AGAAGCCGGAACAGGACGACTAGGAAAGCGGGCTGCATGCC < 41bp 0.503004840929068 0.865372656553423 0.26011378 0.6235368 prediction 0.724735631248711 Functional Gain - FTMT ENSG00000181867 CDS Human protein_coding chr5:121188115 chr5:121188116 stopgain 0.964 1 22 hPsi_associated_SNPs_20098 0 0 0 0 0 unknown 0.438714247222641 0.437852303143524 0.2470736 0 hPsi_site_13822 iPseU_CNN:0.2470736;iRNA_PseU:0 13823 chr19 39962069 39962069 1 + G A STAD 39962068 + 39962048 39962088 41 CGGAAGAAGGACAACCGCTTTGCTGTGGCCTTGGACTCAGA CGGAAGAAGGACAACCGCTTTACTGTGGCCTTGGACTCAGA < 41bp 0.50906193989822 0.871423133725982 0.34111637 0.5574848 prediction 0.724722387655522 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39962068 chr19:39962069 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20099 0 0 1 0 2 Nucleus 0.438718559700526 0.438718592713564 0.1149696 0 hPsi_site_13823 iPseU_CNN:0.1149696;iRNA_PseU:0 13824 chr5 150028786 150028786 1 + G A UCEC 150028785 + 150028765 150028805 41 CGCCCCTTGGGGAACTTCACTGCACCCCCCACCTACACTGA CGCCCCTTGGGGAACTTCACTACACCCCCCACCTACACTGA < 41bp 0.521550531880536 0.883902939197841 0.4554427 0.63892424 prediction 0.724704814634611 Functional Gain - SYNPO ENSG00000171992 CDS Human protein_coding chr5:150028785 chr5:150028786 nonsynonymous SNV 0.417 1 22 hPsi_associated_SNPs_20100 0 0 1 0 0 Endoplasmic reticulum 0.438718583142623 0.438699553261818 0.27784848 0 hPsi_site_13824 iPseU_CNN:0.27784848;iRNA_PseU:0 13825 chr19 54969344 54969344 1 + G A UCEC 54969343 + 54969323 54969363 41 GTCGCTGTACGCCGAGAACTTGCCTGGCAATGTGGGCGAGT GTCGCTGTACGCCGAGAACTTACCTGGCAATGTGGGCGAGT < 41bp 0.519616616079467 0.881959766789913 0.3723399 0.8801267 prediction 0.724686301420892 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969343 chr19:54969344 synonymous SNV . 0 22 hPsi_associated_SNPs_20101 0 0 1 0 1 chromatin 0.439799294139797 0.438768325700948 0.7602534 0 hPsi_site_13825 iPseU_CNN:0.7602534;iRNA_PseU:0 13826 chr3 14963968 14963968 1 + G A COAD 14963967 + 14963947 14963987 41 GGAGAGGCCCCCCACCCTGGTGCCTGTCACACACGTCATGA GGAGAGGCCCCCCACCCTGGTACCTGTCACACACGTCATGA < 41bp 0.527055331845348 0.889397899946603 0.23454401 0.75093156 prediction 0.724685136202509 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14963967 chr3:14963968 synonymous SNV . 0 22 hPsi_associated_SNPs_20102 0 0 0 0 2 Cytosol 0.438718257245143 0.438709542136286 0.50186312 0 hPsi_site_13826 iPseU_CNN:0.50186312;iRNA_PseU:0 13827 chr2 234201936 234201936 1 + G A BRCA 234201935 + 234201915 234201955 41 TACGTGGCGGCAGGCTCTGCTGAGGGCTCTCTGTATATCTG TACGTGGCGGCAGGCTCTGCTAAGGGCTCTCTGTATATCTG < 41bp 0.474445372090733 0.862338292675674 0.2969256 0.44979447 prediction 0.724676585351348 Functional Gain - ATG16L1 ENSG00000085978 CDS Human protein_coding chr2:234201935 chr2:234201936 nonsynonymous SNV 0.907 2 22 hPsi_associated_SNPs_20103 0 0 1 0 2 Ribosome 0.438718593386634 0.438718592994841 0 0 hPsi_site_13827 iPseU_CNN:0;iRNA_PseU:0 13828 chr5 132088594 132088594 1 + G A KIRP 132088593 + 132088573 132088613 41 TACAGCTGCTGCAAGGAACTTGTAATGCAGCAACTGAGAAG TACAGCTGCTGCAAGGAACTTATAATGCAGCAACTGAGAAG < 41bp 0.494588937551043 0.862328099357706 0.28450072 0.48410478 prediction 0.724656198715412 Functional Gain - CCNI2 ENSG00000205089 CDS Human protein_coding chr5:132088593 chr5:132088594 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_20104 0 0 0 0 1 nucleus 0.449204070545385 0.462884996321261 0 0 hPsi_site_13828 iPseU_CNN:0;iRNA_PseU:0 13829 chr2 220368880 220368880 1 + G A HNSC 220368879 + 220368859 220368899 41 GGCATCTACCTCTTTTCTCCTGAAGCCTTGAAGCCTCTTCG GGCATCTACCTCTTTTCTCCTAAAGCCTTGAAGCCTCTTCG < 41bp 0.519470676868097 0.881792534307035 0.19252005 0.22967607 prediction 0.724643714877876 Functional Gain - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220368879 chr2:220368880 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_20105 0 0 1 0 2 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_13829 iPseU_CNN:0;iRNA_PseU:0 13830 chr16 31121725 31121725 1 + G A HNSC 31121724 + 31121704 31121744 41 AGACCTCACTCTTTACAGGATGAAAAGCTCGTCCGCTACTT AGACCTCACTCTTTACAGGATAAAAAGCTCGTCCGCTACTT < 41bp 0.514640882360852 0.876951655887064 0.25953457 0.6572367 prediction 0.724621547052423 Functional Gain - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121724 chr16:31121725 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_20106 0 0 0 0 2 Ribosome 0.438719070013156 0.438719311723904 0.3144734 0 hPsi_site_13830 iPseU_CNN:0.3144734;iRNA_PseU:0 13831 chr1 158576796 158576796 1 + G A SKCM 158576795 + 158576775 158576815 41 CCTGTGCTGAGCCTAGCCTGTGGAGATACAGGCCCGAGTGA CCTGTGCTGAGCCTAGCCTGTAGAGATACAGGCCCGAGTGA < 41bp 0.497467343132059 0.862303616977821 0.3379122 0.7963074 prediction 0.724607233955641 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576795 chr1:158576796 nonsynonymous SNV 0.933 1 22 hPsi_associated_SNPs_20107 0 0 0 0 0 unknown 0.43871629264041 0.438658990013505 0.5926148 0 hPsi_site_13831 iPseU_CNN:0.5926148;iRNA_PseU:0 13832 chr17 7484782 7484782 1 + G A rs17607 7484781 + 7484761 7484801 41 CTCCTCGCCCTGGTGCTTATTGCTTTCTGCATCATCCGGAG CTCCTCGCCCTGGTGCTTATTACTTTCTGCATCATCCGGAG < 41bp 0.515027764231613 0.877329646860723 0.29375505 0.35422802 prediction 0.72460376525822 Functional Gain - CD68 ENSG00000129226 CDS Human protein_coding chr17:7484781 chr17:7484782 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_20108 0 1 1 0 1 Endoplasmic reticulum 0.438718592995213 0.438718592995101 0 0 hPsi_site_13832 iPseU_CNN:0;iRNA_PseU:0 13833 chr19 54377726 54377726 1 + G A COAD 54377725 + 54377705 54377745 41 GTGGCTGACCTGGTGCACTCTGCCCACCTGGTTTTTGTCAA GTGGCTGACCTGGTGCACTCTACCCACCTGGTTTTTGTCAA < 41bp 0.484618440637901 0.862301328406785 0.28183597 0.48016703 prediction 0.72460265681357 Functional Gain - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377725 chr19:54377726 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_20109 0 0 1 0 0 Nucleus 0.438724719964894 0.438719278230112 0 0 hPsi_site_13833 iPseU_CNN:0;iRNA_PseU:0 13834 chr9 140509073 140509073 1 + G A SKCM 140509072 + 140509052 140509092 41 CTTCATTGGCAATATTGCTGTGAACCATGCCCCAGTGAGCC CTTCATTGGCAATATTGCTGTAAACCATGCCCCAGTGAGCC < 41bp 0.514733164506487 0.877031115704601 0.3307386 0.6918553 prediction 0.724595902396229 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140509072 chr9:140509073 synonymous SNV . 0 22 hPsi_associated_SNPs_20110 0 0 1 0 1 Ribosome 0.438718565558642 0.438718558676743 0.3837106 0 hPsi_site_13834 iPseU_CNN:0.3837106;iRNA_PseU:0 13835 chr9 133556768 133556768 1 + G A ACC 133556767 + 133556747 133556787 41 CACGCTGGACAAGCCCTTCGTGTGCCGCTTCTGCAACCGCC CACGCTGGACAAGCCCTTCGTATGCCGCTTCTGCAACCGCC < 41bp 0.510203346605245 0.872498819856971 0.33135998 0.640516 prediction 0.724590946503452 Functional Gain - PRDM12 ENSG00000130711 CDS Human protein_coding chr9:133556767 chr9:133556768 synonymous SNV . 0 22 hPsi_associated_SNPs_20111 0 0 1 0 0 exosome 0.438967440805331 0.438456743245016 0.281032 0 hPsi_site_13835 iPseU_CNN:0.281032;iRNA_PseU:0 13836 chr3 9743656 9743656 1 + G A STAD 9743655 + 9743635 9743675 41 GCATCAGCAGCAATGCCTTGTGAAGAAGCCAGCCCATGACA GCATCAGCAGCAATGCCTTGTAAAGAAGCCAGCCCATGACA < 41bp 0.491666084532686 0.86229035537744 0.24417031 0.49160078 prediction 0.72458071075488 Functional Gain - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9743655 chr3:9743656 synonymous SNV . 0 22 hPsi_associated_SNPs_20112 0 0 1 0 0 Ribosome 0.420582909557623 0.441960476736866 0 0 hPsi_site_13836 iPseU_CNN:0;iRNA_PseU:0 13837 chr11 64054062 64054062 1 + G A CESC 64054061 + 64054041 64054081 41 GCCTGCGCTGCCACCTGCTGTGACCCTGGGGCTGACAGCTG GCCTGCGCTGCCACCTGCTGTAACCCTGGGGCTGACAGCTG < 41bp 0.472808533338785 0.862276333800673 0.21479324 0.41844064 prediction 0.724552667601345 Functional Gain - GPR137 ENSG00000173264 CDS Human protein_coding chr11:64054061 chr11:64054062 synonymous SNV . 0 22 hPsi_associated_SNPs_20113 0 0 1 0 1 Cytosol 0.438654062293425 0.438718187369815 0 0 hPsi_site_13837 iPseU_CNN:0;iRNA_PseU:0 13838 chr1 22304915 22304915 1 + G A UCEC 22304914 + 22304894 22304934 41 TCCAGCCGCGTTGTCAATGGTGAGGATGCGGTCCCCTACAG TCCAGCCGCGTTGTCAATGGTAAGGATGCGGTCCCCTACAG < 41bp 0.481799860117509 0.862274816499214 0.3627829 0.6268248 prediction 0.724549632998428 Functional Gain - CELA3B ENSG00000219073 CDS Human protein_coding chr1:22304914 chr1:22304915 nonsynonymous SNV 0.960 3 22 hPsi_associated_SNPs_20114 0 0 0 0 2 unknown 0.438718771993177 0.438710975152714 0.2536496 0 hPsi_site_13838 iPseU_CNN:0.2536496;iRNA_PseU:0 13839 chrX 151870045 151870045 1 + G A KIRP 151870044 + 151870024 151870064 41 CTTCGGGGATCCCAAGAAGCTGCTCACCCAATATTTCGTGC CTTCGGGGATCCCAAGAAGCTACTCACCCAATATTTCGTGC < 41bp 0.490082242083238 0.862273903366206 0.2535264 0.5306888 prediction 0.724547806732413 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870044 chrX:151870045 synonymous SNV . 0 22 hPsi_associated_SNPs_20115 0 0 1 0 0 Ribosome 0.438718589335998 0.438718683316711 0.0613775999999999 0 hPsi_site_13839 iPseU_CNN:0.0613775999999999;iRNA_PseU:0 13840 chr7 927059 927059 1 + G A GBM 927058 + 927038 927078 41 CCCCAACTCTCCTGAGCGCGTGACCTTTGTGTCCAGAGCCC CCCCAACTCTCCTGAGCGCGTAACCTTTGTGTCCAGAGCCC < 41bp 0.479035710095703 0.862272972054726 0.21027145 0.31683934 prediction 0.724545944109452 Functional Gain - GET4 ENSG00000239857 CDS Human protein_coding chr7:927058 chr7:927059 synonymous SNV . 0 22 hPsi_associated_SNPs_20116 0 0 1 0 2 Cytosol 0.43871859299515 0.438718592914971 0 0 hPsi_site_13840 iPseU_CNN:0;iRNA_PseU:0 13841 chr6 41309825 41309825 1 + G A OV 41309824 + 41309804 41309844 41 TGCAGCCCCCATTGCCCTGGTGCCTGTGTTCTGTGGACTCC TGCAGCCCCCATTGCCCTGGTACCTGTGTTCTGTGGACTCC < 41bp 0.476464673543609 0.862266392149994 0.31609568 0.6396135 prediction 0.724532784299989 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41309824 chr6:41309825 synonymous SNV . 0 22 hPsi_associated_SNPs_20117 0 0 1 0 3 exosome 0.438718591329591 0.438718573632388 0.279227 0 hPsi_site_13841 iPseU_CNN:0.279227;iRNA_PseU:0 13842 chr16 31487442 31487442 1 + G A GBM 31487441 + 31487421 31487461 41 AGAAGGATGGAGCCCCCTTCTGCCCCGAGTGCTACTTTGAG AGAAGGATGGAGCCCCCTTCTACCCCGAGTGCTACTTTGAG < 41bp 0.478173654849255 0.862260755076047 0.23591039 0.6577225 prediction 0.724521510152094 Functional Gain - TGFB1I1 ENSG00000140682 CDS Human protein_coding chr16:31487441 chr16:31487442 nonsynonymous SNV 0.979 5 22 hPsi_associated_SNPs_20118 0 0 0 0 1 Cytosol 0.438718592995097 0.438718592994899 0.315445 0 hPsi_site_13842 iPseU_CNN:0.315445;iRNA_PseU:0 13843 chr1 171086285 171086285 1 + G A SKCM 171086284 + 171086264 171086304 41 GACAGATTACATTGTTTATATGGATGAACTCTCCTCCTTCA GACAGATTACATTGTTTATATAGATGAACTCTCCTCCTTCA < 41bp 0.496186495301065 0.862249425043232 0.19354331 0.2875881 prediction 0.724498850086464 Functional Gain - FMO3 ENSG00000007933 CDS Human protein_coding chr1:171086284 chr1:171086285 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_20119 1 0 0 0 1 exosome 0.439100936141559 0.438719447651056 0 0 hPsi_site_13843 iPseU_CNN:0;iRNA_PseU:0 13844 chr15 22855186 22855186 1 + G A BRCA 22855185 + 22855165 22855205 41 CAGCAGGCAGCACACCATGGTGTCCTTCCTCAAACCTGTCC CAGCAGGCAGCACACCATGGTATCCTTCCTCAAACCTGTCC < 41bp 0.529327625890173 0.891567358702241 0.41987747 0.76929754 prediction 0.724479465624138 Functional Gain - TUBGCP5 ENSG00000153575 CDS Human other chr15:22855185 chr15:22855186 synonymous SNV . 0 22 hPsi_associated_SNPs_20120 0 0 1 0 0 chromatin 0.438712369496877 0.438718474778047 0.53859508 0 hPsi_site_13844 iPseU_CNN:0.53859508;iRNA_PseU:0 13845 chr10 101503103 101503103 1 + G A UCEC 101503102 + 101503082 101503122 41 TGGACACATTGACAAAGAGCTGTGTATGTCCCTTATGGGTA TGGACACATTGACAAAGAGCTATGTATGTCCCTTATGGGTA < 41bp 0.490808369132373 0.86223534761605 0.28776467 0.30971175 prediction 0.724470695232099 Functional Gain - CUTC ENSG00000119929 CDS Human protein_coding chr10:101503102 chr10:101503103 synonymous SNV . 0 22 hPsi_associated_SNPs_20121 0 0 1 0 1 Ribosome 0.43758458904038 0.438580825091595 0 0 hPsi_site_13845 iPseU_CNN:0;iRNA_PseU:0 13846 chr20 43355818 43355818 1 + G A UCEC 43355817 + 43355797 43355837 41 GGGGACCCTGCTCGACCACCTGTGGGCTGGGCATGGCCACC GGGGACCCTGCTCGACCACCTATGGGCTGGGCATGGCCACC < 41bp 0.510719089259719 0.872949279257789 0.49172363 0.46786323 prediction 0.72446037999614 Functional Gain - WISP2 ENSG00000064205 CDS Human protein_coding chr20:43355817 chr20:43355818 nonsynonymous SNV 0.914 5 22 hPsi_associated_SNPs_20122 0 0 0 0 1 nucleus 0.438718655493758 0.43871930120004 0 0 hPsi_site_13846 iPseU_CNN:0;iRNA_PseU:0 13847 chr4 1209982 1209982 1 + G A COAD 1209981 + 1209961 1210001 41 TGGCCCGCAGCGCCACTGCCTGCCCCACGCGACCTGGTGGC TGGCCCGCAGCGCCACTGCCTACCCCACGCGACCTGGTGGC < 41bp 0.488369104041817 0.862227304153047 0.2311253 0.55984795 prediction 0.724454608306095 Functional Gain - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1209981 chr4:1209982 stopgain 0.914 1 22 hPsi_associated_SNPs_20123 0 0 0 0 0 Ribosome 0.438718388289718 0.43853919241398 0.1196959 0 hPsi_site_13847 iPseU_CNN:0.1196959;iRNA_PseU:0 13848 chrX 100667394 100667394 1 + G A SKCM 100667393 + 100667373 100667413 41 GGGTTGGAAATTGTGCCAAATGGGATGACACTGCCAGTGGA GGGTTGGAAATTGTGCCAAATAGGATGACACTGCCAGTGGA < 41bp 0.496723889119676 0.862226354471757 0.1663515 0.2506647 prediction 0.724452708943514 Functional Gain - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667393 chrX:100667394 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20124 0 0 1 0 0 Cytosol 0.438736567428454 0.438651353736768 0 0 hPsi_site_13848 iPseU_CNN:0;iRNA_PseU:0 13849 chr11 2168890 2168890 1 + C T rs145087135 2168891 - 2168871 2168911 41 CAGAGAGCCCAGTCCTGAGGTGAGCTGCTGTGGCCTGTGGC CAGAGAGCCCAGTCCTGAGGTAAGCTGCTGTGGCCTGTGGC < 41bp 0.516747514076149 0.878937718957411 0.31859392 0.60370064 prediction 0.724380409762523 Functional Gain - INS-IGF2 ENSG00000129965 CDS Human protein_coding chr11:2168891 chr11:2168890 synonymous SNV . 0 22 hPsi_associated_SNPs_20125 0 0 0 0 1 exosome 0.438718333279296 0.438718594963664 0.20740128 0 hPsi_site_13849 iPseU_CNN:0.20740128;iRNA_PseU:0 13850 chr17 58740528 58740528 1 + G A UCEC 58740527 + 58740507 58740547 41 CAGAACCACTTGAAGAAAATTGCGCTAAAGCCCTGACTTTA CAGAACCACTTGAAGAAAATTACGCTAAAGCCCTGACTTTA < 41bp 0.498762994770201 0.862187827592208 0.2319307 0.6768042 prediction 0.724375655184417 Functional Gain - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58740527 chr17:58740528 nonsynonymous SNV 0.892 1 22 hPsi_associated_SNPs_20126 0 0 1 0 0 Cytosol 0.438718060629353 0.438719345452202 0.3536084 0 hPsi_site_13850 iPseU_CNN:0.3536084;iRNA_PseU:0 13851 chr6 35705910 35705910 1 + G A LUSC 35705909 + 35705889 35705929 41 GTATGCCAAGAGCATGATCCTGCACAGTATCACTCGCTGTG GTATGCCAAGAGCATGATCCTACACAGTATCACTCGCTGTG < 41bp 0.522315473623386 0.884502455489657 0.16119003 0.2687025 prediction 0.724373963732543 Functional Gain - ARMC12 ENSG00000157343 CDS Human protein_coding chr6:35705909 chr6:35705910 synonymous SNV . 0 22 hPsi_associated_SNPs_20127 0 0 0 0 1 exosome 0.438585830947285 0.438700732476518 0 0 hPsi_site_13851 iPseU_CNN:0;iRNA_PseU:0 13852 chr3 140406965 140406965 1 + G A CESC 140406964 + 140406944 140406984 41 TACGTGCCCTTGGACTTTGTTGAGCTTTCCAGTGCCATCCA TACGTGCCCTTGGACTTTGTTAAGCTTTCCAGTGCCATCCA < 41bp 0.477718549589402 0.862185303281525 0.37799108 0.45228928 prediction 0.724370606563049 Functional Gain - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140406964 chr3:140406965 nonsynonymous SNV 0.702 1 22 hPsi_associated_SNPs_20128 0 0 0 0 0 exosome 0.438870905148466 0.438723063666292 0 0 hPsi_site_13852 iPseU_CNN:0;iRNA_PseU:0 13853 chr17 46023272 46023272 1 + G A STAD 46023271 + 46023251 46023291 41 AAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCG AAACTGCCTGAGGAGGAGGCTAAGTGCTACTTCCACTCCCG < 41bp 0.516282344788619 0.87844436649697 0.23705962 0.65553397 prediction 0.724324043416703 Functional Gain - PNPO ENSG00000108439 CDS Human protein_coding chr17:46023271 chr17:46023272 nonsynonymous SNV 0.318 0 22 hPsi_associated_SNPs_20129 0 0 1 0 2 Ribosome 0.438718592967671 0.438718593253323 0.31106794 0 hPsi_site_13853 iPseU_CNN:0.31106794;iRNA_PseU:0 13854 chr19 57802666 57802666 1 + G A HNSC 57802665 + 57802645 57802685 41 CACAATGGAGATAAGCCCTTTGTGTGCAGTGAATGTGGAAG CACAATGGAGATAAGCCCTTTATGTGCAGTGAATGTGGAAG < 41bp 0.484601300486794 0.862157058318072 0.26785088 0.31002194 prediction 0.724314116636145 Functional Gain - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802665 chr19:57802666 nonsynonymous SNV 0.012 1 22 hPsi_associated_SNPs_20130 0 0 1 0 0 Nucleus 0.440479241803921 0.45849953278538 0 0 hPsi_site_13854 iPseU_CNN:0;iRNA_PseU:0 13855 chr2 31489327 31489327 1 + G A rs148305052 31489326 + 31489306 31489346 41 CGACGAGATCTTCTACACCCTGTCACCGGTGGATGGCAAGA CGACGAGATCTTCTACACCCTATCACCGGTGGATGGCAAGA < 41bp 0.485114886138156 0.862156312621407 0.2390581 0.30711687 prediction 0.724312625242815 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31489326 chr2:31489327 synonymous SNV . 0 22 hPsi_associated_SNPs_20131 0 0 0 1 0 exosome 0.436834323351735 0.439330700092758 0 0 hPsi_site_13855 iPseU_CNN:0;iRNA_PseU:0 13856 chr6 44219266 44219266 1 + G A LGG 44219265 + 44219245 44219285 41 GCAAAAACATTGTTAAGAAGTGCCTTGAGCTCTTCTCTGAG GCAAAAACATTGTTAAGAAGTACCTTGAGCTCTTCTCTGAG < 41bp 0.51961373101674 0.8817473746624 0.21576008 0.45485002 prediction 0.72426728729132 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219265 chr6:44219266 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20132 0 0 1 0 1 Nucleus 0.438872709485689 0.438846567441422 0 0 hPsi_site_13856 iPseU_CNN:0;iRNA_PseU:0 13857 chr19 16791255 16791255 1 + G A SARC 16791254 + 16791234 16791274 41 ACCTCTTCTACAAGTGTGTCTGCTTCCTGCCTGTGAAACTC ACCTCTTCTACAAGTGTGTCTACTTCCTGCCTGTGAAACTC < 41bp 0.475383799300203 0.862131748145749 0.19482297 0.31262523 prediction 0.724263496291497 Functional Gain - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16791254 chr19:16791255 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20133 0 0 1 0 1 Ribosome 0.438718666316556 0.438719145180338 0 0 hPsi_site_13857 iPseU_CNN:0;iRNA_PseU:0 13858 chr18 9815151 9815151 1 + G A SARC 9815150 + 9815130 9815170 41 GAAGAAATGGGTCAAGGAGCTGAAAGAACATGGTCCAGAAA GAAGAAATGGGTCAAGGAGCTAAAAGAACATGGTCCAGAAA < 41bp 0.49113096693048 0.862128313629315 0.5619499 0.7392107 prediction 0.72425662725863 Functional Gain - RAB31 ENSG00000168461 CDS Human protein_coding chr18:9815150 chr18:9815151 synonymous SNV . 0 22 hPsi_associated_SNPs_20134 0 0 1 0 2 Cytosol 0.438714617172686 0.438736748675873 0.3545216 0 hPsi_site_13858 iPseU_CNN:0.3545216;iRNA_PseU:0 13859 chr2 27261971 27261971 1 + G A ESCA 27261970 + 27261950 27261990 41 CTGGACGCGGCTCCTCCTGTTGCTGCTGGTCTTCGCTGTAG CTGGACGCGGCTCCTCCTGTTACTGCTGGTCTTCGCTGTAG < 41bp 0.527412652793934 0.889534899696966 0.2871505 0.7303499 prediction 0.724244493806064 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27261970 chr2:27261971 synonymous SNV . 0 22 hPsi_associated_SNPs_20135 0 0 1 6 1 Ribosome 0.438718632623371 0.438719634962077 0.4606998 0 hPsi_site_13859 iPseU_CNN:0.4606998;iRNA_PseU:0 13860 chr19 3284935 3284935 1 + G A COAD 3284934 + 3284914 3284954 41 GTGGCCGAGACACTGCATCCTGCCTTCTCCGGAGTCCAGCA GTGGCCGAGACACTGCATCCTACCTTCTCCGGAGTCCAGCA < 41bp 0.472950534357203 0.862121899034452 0.1888412 0.26288852 prediction 0.724243798068904 Functional Gain - CELF5 ENSG00000161082 CDS Human protein_coding chr19:3284934 chr19:3284935 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20136 0 0 0 0 2 exosome 0.438748374620918 0.438719591335166 0 0 hPsi_site_13860 iPseU_CNN:0;iRNA_PseU:0 13861 chr1 110585817 110585817 1 + G A CESC 110585816 + 110585796 110585836 41 CATCAAAGTGATTCGCAACATGAGAGCAGCCTCTCCACCAG CATCAAAGTGATTCGCAACATAAGAGCAGCCTCTCCACCAG < 41bp 0.479774522804224 0.862106914658619 0.23476782 0.31567377 prediction 0.724213829317237 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110585816 chr1:110585817 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_20137 0 0 0 0 1 Cytosol 0.438727351467964 0.438840402503986 0 0 hPsi_site_13861 iPseU_CNN:0;iRNA_PseU:0 13862 chr12 110017618 110017618 1 + G A rs76914224 110017617 + 110017597 110017637 41 TGTGGAACAGAGCAAGGTGATGTCACAACACCCACCTCAGA TGTGGAACAGAGCAAGGTGATATCACAACACCCACCTCAGA < 41bp 0.479251199137451 0.86210350240887 0.359392 0.6991862 prediction 0.724207004817741 Functional Gain - MVK ENSG00000110921 CDS Human protein_coding chr12:110017617 chr12:110017618 nonsynonymous SNV 0.021 1 22 hPsi_associated_SNPs_20138 2 0 1 1 1 Ribosome 0.438596988071816 0.438591542688289 0.3983724 0 hPsi_site_13862 iPseU_CNN:0.3983724;iRNA_PseU:0 13863 chr20 56140678 56140678 1 + G A UCEC 56140677 + 56140657 56140697 41 GGCTACATCCCCAAGGAGGATGCCCTGAACCTGAAAGGCCT GGCTACATCCCCAAGGAGGATACCCTGAACCTGAAAGGCCT < 41bp 0.512883147957771 0.874980697829997 0.18813464 0.6043565 prediction 0.724195099744453 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140677 chr20:56140678 nonsynonymous SNV 0.483 1 22 hPsi_associated_SNPs_20139 0 0 1 0 0 exosome 0.438718593006321 0.438718592995098 0.208713 0 hPsi_site_13863 iPseU_CNN:0.208713;iRNA_PseU:0 13864 chr1 223933076 223933076 1 + G A COAD 223933075 + 223933055 223933095 41 GCCCACCAAGGACGGGGAGCTGCTCTTTGTGCATTCAGCCG GCCCACCAAGGACGGGGAGCTACTCTTTGTGCATTCAGCCG < 41bp 0.505399785186959 0.86749534075535 0.2488864 0.7034814 prediction 0.724191111136783 Functional Gain - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223933075 chr1:223933076 synonymous SNV . 0 22 hPsi_associated_SNPs_20140 0 0 1 0 2 Ribosome 0.439152911796005 0.43865829978303 0.4069628 0 hPsi_site_13864 iPseU_CNN:0.4069628;iRNA_PseU:0 13865 chr16 56624826 56624826 1 + G A SKCM 56624825 + 56624805 56624845 41 TGCAAAGGCGGAGAGGCAGCTGAGGCAGAAGCAGAGAAGTG TGCAAAGGCGGAGAGGCAGCTAAGGCAGAAGCAGAGAAGTG < 41bp 0.508112645324196 0.870207134782859 0.21477559 0.33529052 prediction 0.724188978917325 Functional Gain - MT3 ENSG00000087250 CDS Human protein_coding chr16:56624825 chr16:56624826 nonsynonymous SNV 0.073 0 22 hPsi_associated_SNPs_20141 0 0 0 1 1 exosome 0.438718660182 0.438718593751227 0 0 hPsi_site_13865 iPseU_CNN:0;iRNA_PseU:0 13866 chr15 89734361 89734361 1 + G A PRAD 89734360 + 89734340 89734380 41 AATACTATGAGGAAGAAAGTTGCATGCGGTACCTGCACAGG AATACTATGAGGAAGAAAGTTACATGCGGTACCTGCACAGG < 41bp 0.517982810833567 0.880071104570762 0.49846935 0.8135849 prediction 0.724176587474389 Functional Gain - ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89734360 chr15:89734361 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20142 0 0 1 0 1 Nucleus 0.438718592994919 0.438718590485131 0.6271698 0 hPsi_site_13866 iPseU_CNN:0.6271698;iRNA_PseU:0 13867 chr5 76128909 76128909 1 + G A rs115885685 76128908 + 76128888 76128928 41 TGGCTTTTTCTATGGCAACATGTACTGTTCCATTCTCTTCA TGGCTTTTTCTATGGCAACATATACTGTTCCATTCTCTTCA < 41bp 0.492707453009062 0.862076264130004 0.19526911 0.4934621 prediction 0.724152528260007 Functional Gain - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76128908 chr5:76128909 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20143 0 0 1 0 0 Ribosome 0.438732218366523 0.438750641263837 0 0 hPsi_site_13867 iPseU_CNN:0;iRNA_PseU:0 13868 chr15 75500328 75500328 1 + G A BLCA 75500327 + 75500307 75500347 41 AGGACCAACTTCCACAGCTCTGTGGCCTTCATGTTCCGAAA AGGACCAACTTCCACAGCTCTATGGCCTTCATGTTCCGAAA < 41bp 0.483880011481524 0.86207286749451 0.31962025 0.3580594 prediction 0.724145734989021 Functional Gain - C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75500327 chr15:75500328 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20144 0 0 1 0 0 Cytosol 0.438719706183868 0.438718346571618 0 0 hPsi_site_13868 iPseU_CNN:0;iRNA_PseU:0 13869 chr11 86017376 86017376 1 + G A UCEC 86017375 + 86017355 86017395 41 CAACCATGTTGTGGTTTTTATGCTGGGAACAATCCCATTTC CAACCATGTTGTGGTTTTTATACTGGGAACAATCCCATTTC < 41bp 0.490916762871148 0.862062747338523 0.2602055 0.34354615 prediction 0.724125494677047 Functional Gain - HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017375 chr11:86017376 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20145 0 0 1 2 1 nucleolus 0.438718594833499 0.438718599327687 0 0 hPsi_site_13869 iPseU_CNN:0;iRNA_PseU:0 13870 chr9 125281957 125281957 1 + G A SKCM 125281956 + 125281936 125281976 41 ACCATCCCCCATTTCTTCTGTGATCTTGTTGCCCTACTCAA ACCATCCCCCATTTCTTCTGTAATCTTGTTGCCCTACTCAA < 41bp 0.503002471704655 0.865058379528128 0.32873046 0.43261546 prediction 0.724111815646946 Functional Gain - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125281956 chr9:125281957 nonsynonymous SNV 0.818 3 22 hPsi_associated_SNPs_20146 0 0 0 0 0 exosome 0.438693937292675 0.438790814841788 0 0 hPsi_site_13870 iPseU_CNN:0;iRNA_PseU:0 13871 chr2 187373377 187373377 1 + G A rs200450618 187373376 + 187373356 187373396 41 GAAAATGGAGCCATTGATGCTGTTCCTGTTGATGAAAATCT GAAAATGGAGCCATTGATGCTATTCCTGTTGATGAAAATCT < 41bp 0.502066585187667 0.864112653585172 0.5283832 0.60327286 prediction 0.72409213679501 Functional Gain - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187373376 chr2:187373377 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20147 0 0 1 0 0 Ribosome 0.438715630865272 0.438715501130836 0.14977932 0 hPsi_site_13871 iPseU_CNN:0.14977932;iRNA_PseU:0 13872 chr20 33834738 33834738 1 + G A SARC 33834737 + 33834717 33834757 41 GCAGTCGGCAGTCTCCACTATGCAGCAGTTTTACGGGATCC GCAGTCGGCAGTCTCCACTATACAGCAGTTTTACGGGATCC < 41bp 0.521047335621421 0.883092150980278 0.36129782 0.55241233 prediction 0.724089630717713 Functional Gain - MMP24 ENSG00000125966 CDS Human protein_coding chr20:33834737 chr20:33834738 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20148 0 0 0 0 2 Ribosome 0.43871859280538 0.438718077660699 0.10482466 0 hPsi_site_13872 iPseU_CNN:0.10482466;iRNA_PseU:0 13873 chr2 113332548 113332548 1 + G A COAD 113332547 + 113332527 113332567 41 CCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAGAA CCAACTATCGGAGATAAATTTACCAGTCGCCATGGGCAGAA < 41bp 0.482892993493062 0.862040577705374 0.22739935 0.35046118 prediction 0.724081155410748 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113332547 chr2:113332548 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_20149 0 0 1 0 0 Nucleus 0.438718592688361 0.438718592995102 0 0 hPsi_site_13873 iPseU_CNN:0;iRNA_PseU:0 13874 chr1 12921333 12921333 1 + G A rs56145411 12921332 + 12921312 12921352 41 CCATCCTGCCTGGCCTGAGCTGCTGCTCCCAGCTCACCACC CCATCCTGCCTGGCCTGAGCTACTGCTCCCAGCTCACCACC < 41bp 0.513080872993018 0.875108836818565 0.24885532 0.4549949 prediction 0.724055927651093 Functional Gain - PRAMEF2 ENSG00000120952 CDS Human protein_coding chr1:12921332 chr1:12921333 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20150 0 0 0 0 0 unknown 0.438718579231472 0.438718649486199 0 0 hPsi_site_13874 iPseU_CNN:0;iRNA_PseU:0 13875 chr2 73115498 73115498 1 + G A BRCA 73115497 + 73115477 73115517 41 CCTGAGTGACTCCACTCAAGTGAACAACTACTGGGCACTGA CCTGAGTGACTCCACTCAAGTAAACAACTACTGGGCACTGA < 41bp 0.49777556588667 0.86202381501717 0.33621562 0.45422432 prediction 0.72404763003434 Functional Gain - SPR ENSG00000116096 CDS Human protein_coding chr2:73115497 chr2:73115498 synonymous SNV . 0 22 hPsi_associated_SNPs_20151 0 0 0 0 1 Ribosome 0.438718879723569 0.438738934938891 0 0 hPsi_site_13875 iPseU_CNN:0;iRNA_PseU:0 13876 chr19 42813992 42813992 1 + G A COAD 42813991 + 42813971 42814011 41 CACGAGGTGAAATCCCTAGATGTTGCAAGGCTGCTTAGCAG CACGAGGTGAAATCCCTAGATATTGCAAGGCTGCTTAGCAG < 41bp 0.480188650501988 0.862015480469981 0.3405186 0.4047004 prediction 0.724030960939962 Functional Gain - PRR19 ENSG00000188368 CDS Human protein_coding chr19:42813991 chr19:42813992 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_20152 0 0 0 0 0 exosome 0.438719711192351 0.438720780515366 0 0 hPsi_site_13876 iPseU_CNN:0;iRNA_PseU:0 13877 chr4 124322981 124322981 1 + G A SKCM 124322980 + 124322960 124323000 41 GAAAAGCATGAAAGGACTCATGAAATCATACCAATTAATGT GAAAAGCATGAAAGGACTCATAAAATCATACCAATTAATGT < 41bp 0.5005116555695 0.862495562411324 0.093783945 0.119911194 prediction 0.723967813683649 Functional Gain - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124322980 chr4:124322981 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20153 0 0 0 0 0 nucleus 0.437998616884677 0.438619196823401 0 0 hPsi_site_13877 iPseU_CNN:0;iRNA_PseU:0 13878 chr11 71504476 71504476 1 + G A rs377751628 71504475 + 71504455 71504495 41 TGAGCTGTACGAGGTGCTGGTGGAGACCCTGATGGCCAAGG TGAGCTGTACGAGGTGCTGGTAGAGACCCTGATGGCCAAGG < 41bp 0.508501362010496 0.870484289257526 0.36667457 0.832206 prediction 0.72396585449406 Functional Gain - FAM86C1 ENSG00000158483 CDS Human protein_coding chr11:71504475 chr11:71504476 synonymous SNV . 0 22 hPsi_associated_SNPs_20154 0 0 0 0 2 Ribosome 0.438718592995103 0.438718592979743 0.664412 0 hPsi_site_13878 iPseU_CNN:0.664412;iRNA_PseU:0 13879 chr14 75469769 75469769 1 + G A rs141355163 75469768 + 75469748 75469788 41 GTGGAGACCCTGAAGCGGGGTGGTGGGCCGCGCAGCTCCGA GTGGAGACCCTGAAGCGGGGTAGTGGGCCGCGCAGCTCCGA < 41bp 0.479647819207765 0.861970687901723 0.23837134 0.7804097 prediction 0.723941375803445 Functional Gain - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75469768 chr14:75469769 nonsynonymous SNV 0.271 2 22 hPsi_associated_SNPs_20155 0 0 1 0 1 Ribosome 0.438727536843778 0.438718592993119 0.5608194 0 hPsi_site_13879 iPseU_CNN:0.5608194;iRNA_PseU:0 13880 chrX 150869697 150869697 1 + G A rs145819281 150869696 + 150869676 150869716 41 GTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAG GTGGGGGTAGGGACCACGCATAAGTCGAAGCCCCCGGGAAG < 41bp 0.502803223315229 0.864773886218436 0.2786491 0.69492936 prediction 0.723941325806414 Functional Gain - PRRG3 ENSG00000130032 UTR3 Human protein_coding chrX:150869696 chrX:150869697 . . 0 22 hPsi_associated_SNPs_20156 0 0 0 0 0 exosome 0.438717528386133 0.438718593345553 0.38985872 0 hPsi_site_13880 iPseU_CNN:0.38985872;iRNA_PseU:0 13881 chr2 27887218 27887218 1 + G A COAD 27887217 + 27887197 27887237 41 GGCTGTCTGGCTGCGACGTGTGCCTGGAGCACCCTTCGGTG GGCTGTCTGGCTGCGACGTGTACCTGGAGCACCCTTCGGTG < 41bp 0.510828761968871 0.872786619474114 0.27479833 0.69868046 prediction 0.723915715010486 Functional Gain - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27887217 chr2:27887218 nonsynonymous SNV 0.960 1 22 hPsi_associated_SNPs_20157 0 0 1 0 0 nucleoplasm 0.438555607876625 0.438707280842841 0.39736092 0 hPsi_site_13881 iPseU_CNN:0.39736092;iRNA_PseU:0 13882 chr17 2279155 2279155 1 + G A rs201631215 2279154 + 2279134 2279174 41 GAGGAGCTTGCGGCTGTGTGTGCGGCTGCCTACACTGTGCG GAGGAGCTTGCGGCTGTGTGTACGGCTGCCTACACTGTGCG < 41bp 0.476867347262848 0.861955915891715 0.31317955 0.58172333 prediction 0.72391183178343 Functional Gain - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2279154 chr17:2279155 nonsynonymous SNV 0.809 1 22 hPsi_associated_SNPs_20158 0 0 1 0 1 Cytosol 0.438673636816715 0.438724473435036 0.16344666 0 hPsi_site_13882 iPseU_CNN:0.16344666;iRNA_PseU:0 13883 chr1 160053979 160053979 1 + G A SKCM 160053978 + 160053958 160053998 41 GGACCTGTTCACCACGCTGGTGGACCTGCAGTGGCGCCTCA GGACCTGTTCACCACGCTGGTAGACCTGCAGTGGCGCCTCA < 41bp 0.470805779794167 0.861955016692143 0.19729814 0.25122407 prediction 0.723910033384287 Functional Gain - KCNJ9 ENSG00000162728 CDS Human protein_coding chr1:160053978 chr1:160053979 synonymous SNV . 0 22 hPsi_associated_SNPs_20159 0 0 0 0 0 nucleus 0.439181669661445 0.438673642751244 0 0 hPsi_site_13883 iPseU_CNN:0;iRNA_PseU:0 13884 chrX 26212798 26212798 1 + G A SKCM 26212797 + 26212777 26212817 41 AGTGAAGGAATTCTGAGTGGTGATAATGCGCTGCCGAAGTC AGTGAAGGAATTCTGAGTGGTAATAATGCGCTGCCGAAGTC < 41bp 0.502866560200988 0.864817551512432 0.28069913 0.6276889 prediction 0.723901982622889 Functional Gain - MAGEB6 ENSG00000176746 CDS Human protein_coding chrX:26212797 chrX:26212798 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20160 0 0 0 0 0 unknown 0.438718349169259 0.438705053946608 0.2553778 0 hPsi_site_13884 iPseU_CNN:0.2553778;iRNA_PseU:0 13885 chr11 6942841 6942841 1 + G A SKCM 6942840 + 6942820 6942860 41 ACCTCCTGCCCTCCTGAAGCTGGCTTCCATAGACACTTACA ACCTCCTGCCCTCCTGAAGCTAGCTTCCATAGACACTTACA < 41bp 0.497862578287514 0.861949201757884 0.20044953 0.30360037 prediction 0.723898403515767 Functional Gain - OR2D3 ENSG00000178358 CDS Human protein_coding chr11:6942840 chr11:6942841 synonymous SNV . 0 22 hPsi_associated_SNPs_20161 0 0 0 0 0 unknown 0.438737465021136 0.438718718573226 0 0 hPsi_site_13885 iPseU_CNN:0;iRNA_PseU:0 13886 chr6 26444303 26444303 1 + G A rs201309184 26444302 + 26444282 26444322 41 GACCATGGAGCTGAGGTGGGTGAGTTCCAGCCTAAGGCAGG GACCATGGAGCTGAGGTGGGTAAGTTCCAGCCTAAGGCAGG < 41bp 0.466733115706743 0.861940402545298 0.276509 0.72428477 prediction 0.723880805090595 Functional Gain - BTN3A3 ENSG00000111801 CDS Human protein_coding chr6:26444302 chr6:26444303 synonymous SNV . 0 22 hPsi_associated_SNPs_20162 0 0 0 0 0 Endoplasmic reticulum 0.438717873720348 0.438718592994874 0.44856954 0 hPsi_site_13886 iPseU_CNN:0.44856954;iRNA_PseU:0 13887 chrX 153549152 153549152 1 + G A UCEC 153549151 + 153549131 153549171 41 CGTGGACGGACCATTGCTTTTGCTAGCACCTTTGCTGCCTT CGTGGACGGACCATTGCTTTTACTAGCACCTTTGCTGCCTT < 41bp 0.470493171558888 0.861939762034397 0.50330293 0.6866195 prediction 0.723879524068794 Functional Gain - TKTL1 ENSG00000007350 CDS Human protein_coding chrX:153549151 chrX:153549152 nonsynonymous SNV 0.019 4 22 hPsi_associated_SNPs_20163 0 0 0 0 1 exosome 0.438719323478979 0.438718967543098 0.36663314 0 hPsi_site_13887 iPseU_CNN:0.36663314;iRNA_PseU:0 13888 chr17 48917367 48917367 1 + G A LUAD 48917366 + 48917346 48917386 41 GTGGTGGGCCGGCCCCGGCCTGAGATCACCTGGGAGAAGCA GTGGTGGGCCGGCCCCGGCCTAAGATCACCTGGGAGAAGCA < 41bp 0.521888922707914 0.883824361100495 0.2894788 0.31570518 prediction 0.723870876785162 Functional Gain - WFIKKN2 ENSG00000173714 CDS Human protein_coding chr17:48917366 chr17:48917367 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_20164 0 0 0 0 0 exosome 0.438769376545132 0.438718549659681 0 0 hPsi_site_13888 iPseU_CNN:0;iRNA_PseU:0 13889 chr11 43345158 43345158 1 + G A PAAD 43345157 + 43345137 43345177 41 GTGTGGACAGGCTCTTACAGTGCACTCGGCAGGCAGTACCC GTGTGGACAGGCTCTTACAGTACACTCGGCAGGCAGTACCC < 41bp 0.49227552980965 0.861934954779858 0.23289078 0.48235318 prediction 0.723869909559716 Functional Gain - API5 ENSG00000166181 CDS Human protein_coding chr11:43345157 chr11:43345158 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20165 0 0 1 0 1 Ribosome 0.438671602542222 0.437559069506752 0 0 hPsi_site_13889 iPseU_CNN:0;iRNA_PseU:0 13890 chr19 41704625 41704625 1 + G A PAAD 41704624 + 41704604 41704644 41 CTCCCCACAGACCTACGAGATGTTCTCCTGGTTCCTGCGGC CTCCCCACAGACCTACGAGATATTCTCCTGGTTCCTGCGGC < 41bp 0.477217062531538 0.861922401809952 0.42801648 0.7206015 prediction 0.723844803619904 Functional Gain - CYP2S1 ENSG00000167600 CDS Human protein_coding chr19:41704624 chr19:41704625 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_20166 0 0 0 0 1 Ribosome 0.439313965445165 0.438564988673065 0.441203 0 hPsi_site_13890 iPseU_CNN:0.441203;iRNA_PseU:0 13891 chr5 112868681 112868681 1 + G A UCEC 112868680 + 112868660 112868700 41 ATCGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAG ATCGCTGTGGCTGAAAGAGTTACCGCAGAGAGACGGGAAAG < 41bp 0.485718459325828 0.86191735603508 0.20322198 0.38083637 prediction 0.72383471207016 Functional Gain - YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868680 chr5:112868681 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20167 0 0 1 0 1 Cytosol 0.383072044535487 0.430307918270093 0 0 hPsi_site_13891 iPseU_CNN:0;iRNA_PseU:0 13892 chr18 21098870 21098870 1 + G A COAD 21098869 + 21098849 21098889 41 ATTAGATACGGGCAGCTGTATGTTCTCTTCTTGAGGCATCA ATTAGATACGGGCAGCTGTATATTCTCTTCTTGAGGCATCA < 41bp 0.516208894961512 0.878114199455776 0.50088626 0.48213637 prediction 0.723810608988527 Functional Gain - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21098869 chr18:21098870 nonsynonymous SNV 0.828 0 22 hPsi_associated_SNPs_20168 0 0 1 0 2 Ribosome 0.438718567488738 0.438718576882409 0 0 hPsi_site_13892 iPseU_CNN:0;iRNA_PseU:0 13893 chr9 35732805 35732805 1 + G A UCEC 35732804 + 35732784 35732824 41 GGATGCTGGTGACCAAGACCTGCTGGCCTTCCTGCTAGAGG GGATGCTGGTGACCAAGACCTACTGGCCTTCCTGCTAGAGG < 41bp 0.507276644827624 0.869173717586079 0.26904517 0.45778498 prediction 0.72379414551691 Functional Gain - CREB3 ENSG00000107175 CDS Human protein_coding chr9:35732804 chr9:35732805 synonymous SNV . 0 22 hPsi_associated_SNPs_20169 0 0 1 0 1 Endoplasmic reticulum 0.438527126273702 0.440933758070679 0 0 hPsi_site_13893 iPseU_CNN:0;iRNA_PseU:0 13894 chr17 72246433 72246433 1 + G A BLCA 72246432 + 72246412 72246452 41 GCTTGCAATCCAGCTCCTGCTGAACTCCTCAGAGTCCAGCC GCTTGCAATCCAGCTCCTGCTAAACTCCTCAGAGTCCAGCC < 41bp 0.526348834971303 0.88822671301948 0.25556797 0.414958 prediction 0.723755756096352 Functional Gain - TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72246432 chr17:72246433 synonymous SNV . 0 22 hPsi_associated_SNPs_20170 0 0 0 0 2 Endoplasmic reticulum 0.438757893129584 0.438724612969185 0 0 hPsi_site_13894 iPseU_CNN:0;iRNA_PseU:0 13895 chr15 69733189 69733189 1 + G A COAD 69733188 + 69733168 69733208 41 TACATAGGCGCTCTAACTCTTGCAGCAGCATTTCTGTAGCT TACATAGGCGCTCTAACTCTTACAGCAGCATTTCTGTAGCT < 41bp 0.516903121768257 0.878779175340726 0.31688523 0.37162328 prediction 0.723752107144937 Functional Gain - KIF23 ENSG00000137807 CDS Human protein_coding chr15:69733188 chr15:69733189 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20171 0 0 1 0 1 Nucleus 0.438706289035988 0.438363329279518 0 0 hPsi_site_13895 iPseU_CNN:0;iRNA_PseU:0 13896 chr20 36997753 36997753 1 + G A COAD 36997752 + 36997732 36997772 41 GACCCCTATATGGAGATAGATGCCTTTGTGCTCCTGCCCAG GACCCCTATATGGAGATAGATACCTTTGTGCTCCTGCCCAG < 41bp 0.470196823908933 0.861874652525329 0.25826865 0.6983762 prediction 0.723749305050658 Functional Gain - LBP ENSG00000129988 CDS Human protein_coding chr20:36997752 chr20:36997753 nonsynonymous SNV 0.060 0 22 hPsi_associated_SNPs_20172 0 0 0 0 1 exosome 0.438718592073549 0.438718592984377 0.3967524 0 hPsi_site_13896 iPseU_CNN:0.3967524;iRNA_PseU:0 13897 chr19 39691375 39691375 1 + G A UCEC 39691374 + 39691354 39691394 41 ACGGGTGACCGACTCCTCCGTGTCTGTGCAGCTCCGGGAGT ACGGGTGACCGACTCCTCCGTATCTGTGCAGCTCCGGGAGT < 41bp 0.502532259385166 0.864403077699799 0.33617222 0.6152711 prediction 0.723741636629265 Functional Gain - NCCRP1 ENSG00000188505 CDS Human protein_coding chr19:39691374 chr19:39691375 synonymous SNV . 0 22 hPsi_associated_SNPs_20173 0 0 0 0 0 exosome 0.438713723243303 0.438715383244593 0.2305422 0 hPsi_site_13897 iPseU_CNN:0.2305422;iRNA_PseU:0 13898 chr9 110084296 110084296 1 + G A SKCM 110084295 + 110084275 110084315 41 AGATAGAGAAAGTCAGGCTGTGGTTGACCCCCCTCAAGCAG AGATAGAGAAAGTCAGGCTGTAGTTGACCCCCCTCAAGCAG < 41bp 0.523307854628141 0.885160763200818 0.25648382 0.72300947 prediction 0.723705817145354 Functional Gain - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110084295 chr9:110084296 synonymous SNV . 0 22 hPsi_associated_SNPs_20174 0 0 1 0 1 Ribosome 0.438697860720701 0.438718348539154 0.44601894 0 hPsi_site_13898 iPseU_CNN:0.44601894;iRNA_PseU:0 13899 chr12 130649201 130649201 1 + G A THYM 130649200 + 130649180 130649220 41 AAAACTCACCACGGGAAATATGAGATCCCTGCCCAGTCGCC AAAACTCACCACGGGAAATATAAGATCCCTGCCCAGTCGCC < 41bp 0.5061225851847 0.867963427591298 0.34085298 0.6077527 prediction 0.723681684813196 Functional Gain - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130649200 chr12:130649201 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_20175 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.2155054 0 hPsi_site_13899 iPseU_CNN:0.2155054;iRNA_PseU:0 13900 chr5 36684048 36684048 1 + G A rs181358295 36684047 + 36684027 36684067 41 ATGGTCATTGTGCTGACATCTGTCGGCCTGCCCACTGACGA ATGGTCATTGTGCTGACATCTATCGGCCTGCCCACTGACGA < 41bp 0.487987960691234 0.861838038357248 0.25277194 0.57178724 prediction 0.723676076714495 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36684047 chr5:36684048 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_20176 0 0 0 0 2 Endoplasmic reticulum 0.438729965794155 0.438723730007429 0.14357448 0 hPsi_site_13900 iPseU_CNN:0.14357448;iRNA_PseU:0 13901 chr17 7359954 7359954 1 + G A ESCA 7359953 + 7359933 7359973 41 TAGTGGACCGCCTCTTCCTGTGGACTTTCATCATCTTCACC TAGTGGACCGCCTCTTCCTGTAGACTTTCATCATCTTCACC < 41bp 0.485794068475701 0.861837514346288 0.30786026 0.4213553 prediction 0.723675028692576 Functional Gain - CHRNB1 ENSG00000170175 CDS Human protein_coding chr17:7359953 chr17:7359954 stopgain 1.000 1 22 hPsi_associated_SNPs_20177 0 0 1 0 1 chromatin 0.438718871429051 0.438718415323332 0 0 hPsi_site_13901 iPseU_CNN:0;iRNA_PseU:0 13902 chr10 104650361 104650361 1 + G A GBM 104650360 + 104650340 104650380 41 ATCTTGAAGAATTCAAGATTTGCTCAAGATTTTCTGATCAG ATCTTGAAGAATTCAAGATTTACTCAAGATTTTCTGATCAG < 41bp 0.487427233908861 0.861825340108273 0.47654986 0.65208256 prediction 0.723650680216546 Functional Gain - AS3MT ENSG00000214435 CDS Human protein_coding chr10:104650360 chr10:104650361 nonsynonymous SNV 0.939 1 22 hPsi_associated_SNPs_20178 0 0 1 0 2 Nucleus 0.438687841238758 0.440945280436121 0.30416512 0 hPsi_site_13902 iPseU_CNN:0.30416512;iRNA_PseU:0 13903 chr6 127902381 127902381 1 + G A UCEC 127902380 + 127902360 127902400 41 CTGTTGAAGTACTTATGGGCTGCACACACTTCAACCTTGGC CTGTTGAAGTACTTATGGGCTACACACACTTCAACCTTGGC < 41bp 0.498737576785341 0.861824539673823 0.34616554 0.9214382 prediction 0.723649079347647 Functional Gain - C6orf58 ENSG00000184530 CDS Human protein_coding chr6:127902380 chr6:127902381 nonsynonymous SNV 0.089 4 22 hPsi_associated_SNPs_20179 0 0 0 0 2 exosome 0.438755025296725 0.438310842348931 0.8428764 0 hPsi_site_13903 iPseU_CNN:0.8428764;iRNA_PseU:0 13904 chr19 42797178 42797178 1 + G A SKCM 42797177 + 42797157 42797197 41 CCCGAAGGCCCCCCAGAAAGTGAAGGCAGCCATCGCCAGCA CCCGAAGGCCCCCCAGAAAGTAAAGGCAGCCATCGCCAGCA < 41bp 0.480587288987463 0.861811363141002 0.308847 0.358238 prediction 0.723622726282004 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42797177 chr19:42797178 synonymous SNV . 0 22 hPsi_associated_SNPs_20180 0 0 0 0 1 Cytosol 0.438718116855155 0.438718592995102 0 0 hPsi_site_13904 iPseU_CNN:0;iRNA_PseU:0 Parkinson's disease 13905 chr6 109475077 109475077 1 + G A UCEC 109475076 + 109475056 109475096 41 AGAACAAGATCAGATGAAGCTGTATGCAAAACTTGAAAAGC AGAACAAGATCAGATGAAGCTATATGCAAAACTTGAAAAGC < 41bp 0.489039008833509 0.861806066436606 0.27697343 0.33955896 prediction 0.723612132873212 Functional Gain - CEP57L1 ENSG00000183137 CDS Human protein_coding chr6:109475076 chr6:109475077 synonymous SNV . 0 22 hPsi_associated_SNPs_20181 0 0 1 0 2 chromatin 0.437520567933495 0.420545652353008 0 0 hPsi_site_13905 iPseU_CNN:0;iRNA_PseU:0 13906 chr6 44122464 44122464 1 + G A GBM 44122463 + 44122443 44122483 41 GGTGCTGCAGGACTCAGAGGTGGACGGGGATGGGGATGGGG GGTGCTGCAGGACTCAGAGGTAGACGGGGATGGGGATGGGG < 41bp 0.485071125078476 0.86180590444376 0.16573557 0.22837126 prediction 0.72361180888752 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122463 chr6:44122464 synonymous SNV . 0 22 hPsi_associated_SNPs_20182 0 0 1 0 1 Ribosome 0.43871819485127 0.43871858887211 0 0 hPsi_site_13906 iPseU_CNN:0;iRNA_PseU:0 13907 chr1 67838404 67838404 1 + G A COAD 67838403 + 67838383 67838423 41 CAGTCCAGGAGCAAATGGGCTGCCTCCTCCATTATAGGATA CAGTCCAGGAGCAAATGGGCTACCTCCTCCATTATAGGATA < 41bp 0.511255600530298 0.873047887449959 0.3262571 0.66411614 prediction 0.723584573839321 Functional Gain - IL12RB2 ENSG00000081985 CDS Human protein_coding chr1:67838403 chr1:67838404 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_20183 0 0 0 0 2 cytosol 0.438718668727118 0.438724456287783 0.32823228 0 hPsi_site_13907 iPseU_CNN:0.32823228;iRNA_PseU:0 13908 chr16 4387414 4387414 1 + G A rs149580171 4387413 + 4387393 4387433 41 CCTGCTGCCAGGCACCGTGCTGGACCTGTCCACGGGCGTCA CCTGCTGCCAGGCACCGTGCTAGACCTGTCCACGGGCGTCA < 41bp 0.48584914553413 0.861786577569478 0.18613496 0.69254154 prediction 0.723573155138955 Functional Gain - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4387413 chr16:4387414 synonymous SNV . 0 22 hPsi_associated_SNPs_20184 0 0 0 0 0 Endoplasmic reticulum 0.438299941433534 0.438718621332085 0.38508308 0 hPsi_site_13908 iPseU_CNN:0.38508308;iRNA_PseU:0 13909 chr19 47996742 47996742 1 + G A SKCM 47996741 + 47996721 47996761 41 GTGGTGCTTGGCCGCAATCGTGAATCGGCCCTGGAGGGGAC GTGGTGCTTGGCCGCAATCGTAAATCGGCCCTGGAGGGGAC < 41bp 0.489007927419496 0.861783532890003 0.1123966 0.28058302 prediction 0.723567065780006 Functional Gain - NAPA ENSG00000105402 CDS Human protein_coding chr19:47996741 chr19:47996742 synonymous SNV . 0 22 hPsi_associated_SNPs_20185 0 0 0 0 1 Ribosome 0.43869462778857 0.438995808752081 0 0 hPsi_site_13909 iPseU_CNN:0;iRNA_PseU:0 13910 chr1 156180034 156180034 1 + G A BRCA 156180033 + 156180013 156180053 41 CTGTGTTGACTTTTCCAGGTTGAGGGCAAGAACTCCATCAT CTGTGTTGACTTTTCCAGGTTAAGGGCAAGAACTCCATCAT < 41bp 0.507901043355117 0.869682755749728 0.3315465 0.6840798 prediction 0.723563424789221 Functional Gain - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156180033 chr1:156180034 nonsynonymous SNV 0.898 1 22 hPsi_associated_SNPs_20186 0 0 1 1 1 chromatin 0.438872075807331 0.438719888282907 0.3681596 0 hPsi_site_13910 iPseU_CNN:0.3681596;iRNA_PseU:0 13911 chr6 42988418 42988418 1 + G A UCEC 42988417 + 42988397 42988437 41 CCTTCCAGGTGGGAGCTGAATGCCATGACCACCAACAGCAA CCTTCCAGGTGGGAGCTGAATACCATGACCACCAACAGCAA < 41bp 0.511956032902906 0.87372248990165 0.24285308 0.40236527 prediction 0.723532913997489 Functional Gain - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42988417 chr6:42988418 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_20187 0 0 1 1 1 Ribosome 0.43869143887088 0.438718596572974 0 0 hPsi_site_13911 iPseU_CNN:0;iRNA_PseU:0 13912 chr19 36024460 36024460 1 + G A GBM 36024459 + 36024439 36024479 41 CGCGACATCGTCCTCACCAATGTCACCGTTGTCCAGTTGCT CGCGACATCGTCCTCACCAATATCACCGTTGTCCAGTTGCT < 41bp 0.496038468796364 0.861754122417191 0.22463378 0.3109802 prediction 0.723508244834383 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36024459 chr19:36024460 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_20188 0 0 0 0 1 chromatin 0.438796550808373 0.438801567202229 0 0 hPsi_site_13912 iPseU_CNN:0;iRNA_PseU:0 13913 chr10 96988512 96988512 1 + G A rs183053881 96988511 + 96988491 96988531 41 TGGTCTGGTAGAGTTGATGATGTTGCCAATGCATTGGGTCA TGGTCTGGTAGAGTTGATGATATTGCCAATGCATTGGGTCA < 41bp 0.489474888549726 0.861750353626733 0.27241084 0.42204604 prediction 0.723500707253466 Functional Gain - ACSM6 ENSG00000173124 CDS Human protein_coding chr10:96988511 chr10:96988512 nonsynonymous SNV 0.649 0 22 hPsi_associated_SNPs_20189 0 0 0 0 0 exosome 0.438274571638793 0.438714616637513 0 0 hPsi_site_13913 iPseU_CNN:0;iRNA_PseU:0 13914 chr11 70267647 70267647 1 + G A BLCA 70267646 + 70267626 70267666 41 GACTCCGCTGCTGTGGGGTTTGATTACAAGGAGAAGCTGGC GACTCCGCTGCTGTGGGGTTTAATTACAAGGAGAAGCTGGC < 41bp 0.467137800677736 0.861749237301694 0.3263136 0.6164062 prediction 0.723498474603387 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70267646 chr11:70267647 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_20190 0 0 1 0 1 Ribosome 0.438718589320605 0.438644530985315 0.2328124 0 hPsi_site_13914 iPseU_CNN:0.2328124;iRNA_PseU:0 13915 chr9 139973543 139973543 1 + G A LIHC 139973542 + 139973522 139973562 41 GGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCG GGACAACATCCTGGTGCGGCTAGCGGACCCTGTCTTCATCG < 41bp 0.478457669150152 0.861743339425976 0.23525745 0.48928633 prediction 0.723486678851952 Functional Gain - UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139973542 chr9:139973543 synonymous SNV . 0 22 hPsi_associated_SNPs_20191 0 0 1 0 1 Ribosome 0.438718796942472 0.438718582807529 0 0 hPsi_site_13915 iPseU_CNN:0;iRNA_PseU:0 13916 chr11 15247243 15247243 1 + G A UCEC 15247242 + 15247222 15247262 41 GAAGTCTTCCTACTGGCCTCTGCGGCCCTTGCCAACATCAC GAAGTCTTCCTACTGGCCTCTACGGCCCTTGCCAACATCAC < 41bp 0.458943495358506 0.861734548137176 0.21131465 0.39744934 prediction 0.723469096274352 Functional Gain - INSC ENSG00000188487 CDS Human protein_coding chr11:15247242 chr11:15247243 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20192 0 0 0 0 1 exosome 0.438718593354872 0.438718592994494 0 0 hPsi_site_13916 iPseU_CNN:0;iRNA_PseU:0 13917 chr6 39040774 39040774 1 + G A SKCM 39040773 + 39040753 39040793 41 GCCCAGCAGCACCAGTGGGATGGGCTCCTCTCCTACCAGGT GCCCAGCAGCACCAGTGGGATAGGCTCCTCTCCTACCAGGT < 41bp 0.464087564396375 0.861728440443779 0.29265288 0.7421162 prediction 0.723456880887558 Functional Gain - GLP1R ENSG00000112164 CDS Human protein_coding chr6:39040773 chr6:39040774 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_20193 0 0 0 0 1 unknown 0.438719428588973 0.438718580353351 0.4842324 0 hPsi_site_13917 iPseU_CNN:0.4842324;iRNA_PseU:0 13918 chr9 35607612 35607612 1 + G A SKCM 35607611 + 35607591 35607631 41 GAAGGAGCCATTGGCCGTGGTGGGCTCCCCATACTGGATGG GAAGGAGCCATTGGCCGTGGTAGGCTCCCCATACTGGATGG < 41bp 0.477063681951364 0.861722177082809 0.23667344 0.7413402 prediction 0.723444354165618 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35607611 chr9:35607612 synonymous SNV . 0 22 hPsi_associated_SNPs_20194 0 0 1 0 2 Cytosol 0.438718593021603 0.438718592995655 0.4826804 0 hPsi_site_13918 iPseU_CNN:0.4826804;iRNA_PseU:0 13919 chr7 141311049 141311049 1 + G A BRCA 141311048 + 141311028 141311068 41 GAACTGATGGAAAACACGGATGTGATCATTGTTGCAGGAGG GAACTGATGGAAAACACGGATATGATCATTGTTGCAGGAGG < 41bp 0.495021951010554 0.861705346174586 0.35016173 0.55748844 prediction 0.723410692349172 Functional Gain - AGK ENSG00000006530 CDS Human protein_coding chr7:141311048 chr7:141311049 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20195 0 0 1 0 2 Cytosol 0.438732180127269 0.438689758488869 0.11497688 0 hPsi_site_13919 iPseU_CNN:0.11497688;iRNA_PseU:0 13920 chr6 43473539 43473539 1 + G A COAD 43473538 + 43473518 43473558 41 GAGGATGGGGGTTCACCACCTGCACCGCAAGGACAGCCTGA GAGGATGGGGGTTCACCACCTACACCGCAAGGACAGCCTGA < 41bp 0.505016486064192 0.866720742600285 0.29298773 0.5147544 prediction 0.723408513072186 Functional Gain - TJAP1 ENSG00000137221 CDS Human protein_coding chr6:43473538 chr6:43473539 synonymous SNV . 0 22 hPsi_associated_SNPs_20196 0 0 1 0 0 chromatin 0.438719142970662 0.438703756499102 0.0295087999999999 0 hPsi_site_13920 iPseU_CNN:0.0295087999999999;iRNA_PseU:0 13921 chr5 72864347 72864347 1 + G A GBM 72864346 + 72864326 72864366 41 CGACAAGATGGTAGATTGCTTGTGGCTGGCAGTGAAGATGG CGACAAGATGGTAGATTGCTTATGGCTGGCAGTGAAGATGG < 41bp 0.486774924116009 0.861699422753363 0.20935717 0.30893767 prediction 0.723398845506727 Functional Gain - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72864346 chr5:72864347 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20197 0 0 1 0 1 Ribosome 0.438711966268727 0.438716475234193 0 0 hPsi_site_13921 iPseU_CNN:0;iRNA_PseU:0 13922 chr14 20925398 20925398 1 + G A COAD 20925397 + 20925377 20925417 41 CCCAAGGGGAACAAAAAGAATGCTGGCTTCACGCCACAAGA CCCAAGGGGAACAAAAAGAATACTGGCTTCACGCCACAAGA < 41bp 0.479187073116119 0.861694841996587 0.31787413 0.49139348 prediction 0.723389683993173 Functional Gain - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20925397 chr14:20925398 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20198 0 0 1 0 0 Cytosol 0.438718647933904 0.438725768684446 0 0 hPsi_site_13922 iPseU_CNN:0;iRNA_PseU:0 13923 chr19 7675433 7675433 1 + G A LUSC 7675432 + 7675412 7675452 41 CAGCTCGTGCAGGATTTCTGTGCCTCTCGCCTTCCTCGTGG CAGCTCGTGCAGGATTTCTGTACCTCTCGCCTTCCTCGTGG < 41bp 0.526638224507877 0.888327169550943 0.5816512 0.8688249 prediction 0.723377890086133 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7675432 chr19:7675433 nonsynonymous SNV 0.946 2 22 hPsi_associated_SNPs_20199 0 0 1 0 2 nucleus 0.438715967186043 0.438684362265212 0.5743474 0 hPsi_site_13923 iPseU_CNN:0.5743474;iRNA_PseU:0 13924 chr3 50609606 50609606 1 + G A STAD 50609605 + 50609585 50609625 41 GGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTC GGGGCTCAGCCTAAGGATGGTACCCCCAGTGTTTATTCCTC < 41bp 0.468732528064347 0.861683307718819 0.29050574 0.69873005 prediction 0.723366615437637 Functional Gain - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50609605 chr3:50609606 synonymous SNV . 0 22 hPsi_associated_SNPs_20200 0 0 1 0 2 Ribosome 0.438718592995134 0.438718592995102 0.3974601 0 hPsi_site_13924 iPseU_CNN:0.3974601;iRNA_PseU:0 13925 chr10 102684066 102684066 1 + G A UCEC 102684065 + 102684045 102684085 41 AGGTACCAAGGAGACTAAGATGCAGAAACCCCACTTACCTT AGGTACCAAGGAGACTAAGATACAGAAACCCCACTTACCTT < 41bp 0.478291444697998 0.861683257795066 0.25442773 0.8774905 prediction 0.723366515590132 Functional Gain - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684065 chr10:102684066 nonsynonymous SNV 0.967 0 22 hPsi_associated_SNPs_20201 0 0 1 0 0 Nucleus 0.438718592941483 0.438718592991638 0.754981 0 hPsi_site_13925 iPseU_CNN:0.754981;iRNA_PseU:0 13926 chr17 62515460 62515460 1 + G A rs9910506 62515459 + 62515439 62515479 41 GTGCTCCTTGTCTTCTGAGATGTTGGGCCCCTCTTGGGATG GTGCTCCTTGTCTTCTGAGATATTGGGCCCCTCTTGGGATG < 41bp 0.48439067400107 0.861677043831681 0.3757025 0.6003007 prediction 0.723354087663362 Functional Gain - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62515459 chr17:62515460 nonsynonymous SNV 0.028 0 22 hPsi_associated_SNPs_20202 0 0 1 0 2 Nucleus 0.438718540067514 0.43871872124223 0.2006014 0 hPsi_site_13926 iPseU_CNN:0.2006014;iRNA_PseU:0 13927 chr1 3670697 3670697 1 + G A SKCM 3670696 + 3670676 3670716 41 TGCCAGAGTGAACCCAAGGATGCCGCCAGCCTCACCGGCTT TGCCAGAGTGAACCCAAGGATACCGCCAGCCTCACCGGCTT < 41bp 0.490876953874131 0.861674866591975 0.22960627 0.28489548 prediction 0.723349733183949 Functional Gain - CCDC27 ENSG00000162592 CDS Human protein_coding chr1:3670696 chr1:3670697 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20203 0 0 0 0 0 exosome 0.438719928502871 0.438728037653338 0 0 hPsi_site_13927 iPseU_CNN:0;iRNA_PseU:0 13928 chr9 12694121 12694121 1 + G A COAD 12694120 + 12694100 12694140 41 CTTTGAGAAGTGGTATGTGTTGCCCAGACCTGTCCCCTGTG CTTTGAGAAGTGGTATGTGTTACCCAGACCTGTCCCCTGTG < 41bp 0.515263184881964 0.876936127187645 0.2970432 0.7805063 prediction 0.723345884611361 Functional Gain - TYRP1 ENSG00000107165 CDS Human protein_coding chr9:12694120 chr9:12694121 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20204 0 0 0 0 0 exosome 0.438782811162707 0.438980025041644 0.5610126 0 hPsi_site_13928 iPseU_CNN:0.5610126;iRNA_PseU:0 13929 chr7 65751580 65751580 1 + G A rs149855391 65751579 + 65751559 65751599 41 GTTGGGAAGATACCGCCAGATGTTTTACAAGACATGGCAGT GTTGGGAAGATACCGCCAGATATTTTACAAGACATGGCAGT < 41bp 0.515560644534818 0.877214131160119 0.24177 0.32448283 prediction 0.723306973250603 Functional Gain - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751579 chr7:65751580 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_20205 0 0 1 2 0 nucleoplasm 0.438719451046459 0.438734090913826 0 0 hPsi_site_13929 iPseU_CNN:0;iRNA_PseU:0 13930 chr6 97052681 97052681 1 + G A LUAD 97052680 + 97052660 97052700 41 GATGCTTCAAGTGCACCAAATGCAATCACTCTTTGGTGGAA GATGCTTCAAGTGCACCAAATACAATCACTCTTTGGTGGAA < 41bp 0.486546537934063 0.861651200210338 0.25316864 0.2967874 prediction 0.723302400420676 Functional Gain - FHL5 ENSG00000112214 CDS Human protein_coding chr6:97052680 chr6:97052681 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_20206 0 0 0 0 1 exosome 0.436989805578523 0.438644223744666 0 0 hPsi_site_13930 iPseU_CNN:0;iRNA_PseU:0 13931 chr7 4823016 4823016 1 + G A SKCM 4823015 + 4822995 4823035 41 GCGCTGGAGAGCCGGCAGCCTGAGGGACCCAGCCTCAGACA GCGCTGGAGAGCCGGCAGCCTAAGGGACCCAGCCTCAGACA < 41bp 0.514031604898549 0.875679307176322 0.32399124 0.5935942 prediction 0.723295404555545 Functional Gain - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823015 chr7:4823016 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_20207 0 0 1 0 0 chromatin 0.438753660839125 0.438631141587712 0.1871884 0 hPsi_site_13931 iPseU_CNN:0.1871884;iRNA_PseU:0 13932 chr16 75690148 75690148 1 + G A BRCA 75690147 + 75690127 75690167 41 TTGAAATACATATAACTATGTGTGATGATGATCCACCCACA TTGAAATACATATAACTATGTATGATGATGATCCACCCACA < 41bp 0.488136924016655 0.861636358248793 0.20897004 0.23162109 prediction 0.723272716497586 Functional Gain - TERF2IP ENSG00000166848 CDS Human protein_coding chr16:75690147 chr16:75690148 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20208 0 0 1 0 1 Ribosome 0.438718593353432 0.438718597521057 0 0 hPsi_site_13932 iPseU_CNN:0;iRNA_PseU:0 13933 chr10 102748880 102748880 1 + G A LUSC 102748879 + 102748859 102748899 41 CTGGAACAGTTCCGGCGGATTGTATTCTGGTTGGGGGATGA CTGGAACAGTTCCGGCGGATTATATTCTGGTTGGGGGATGA < 41bp 0.499140542513851 0.861634690874091 0.24892768 0.30360082 prediction 0.723269381748182 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748879 chr10:102748880 nonsynonymous SNV 0.954 1 22 hPsi_associated_SNPs_20209 0 0 1 0 0 unknown 0.457671158773378 0.426790813923922 0 0 hPsi_site_13933 iPseU_CNN:0;iRNA_PseU:0 13934 chr19 4234773 4234773 1 + G A SKCM 4234772 + 4234752 4234792 41 CTTCCCAGAGATCTTCTCACTGAAGTACTGGATCCGTTACA CTTCCCAGAGATCTTCTCACTAAAGTACTGGATCCGTTACA < 41bp 0.481686411632569 0.861631849505555 0.30101755 0.31632644 prediction 0.723263699011111 Functional Gain - EBI3 ENSG00000105246 CDS Human protein_coding chr19:4234772 chr19:4234773 synonymous SNV . 0 22 hPsi_associated_SNPs_20210 0 0 0 0 1 Cytosol 0.438718592995105 0.438718594953109 0 0 hPsi_site_13934 iPseU_CNN:0;iRNA_PseU:0 13935 chr16 602965 602965 1 + G A CESC 602964 + 602944 602984 41 GCCTACCTGCACGTGCAGTGTGACTGCACCGACAGCTTCAA GCCTACCTGCACGTGCAGTGTAACTGCACCGACAGCTTCAA < 41bp 0.514349152989868 0.875975209295236 0.23301753 0.32993585 prediction 0.723252112610736 Functional Gain - CAPN15 ENSG00000103326 CDS Human protein_coding chr16:602964 chr16:602965 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_20211 0 0 1 0 1 chromatin 0.438624952986033 0.433270074001341 0 0 hPsi_site_13935 iPseU_CNN:0;iRNA_PseU:0 13936 chr6 3019749 3019749 1 + G A UCEC 3019748 + 3019728 3019768 41 TTCTGTGGATTTAAAGTCCTTGCCCCTCAGATCAGCTTTGC TTCTGTGGATTTAAAGTCCTTACCCCTCAGATCAGCTTTGC < 41bp 0.512741050859106 0.874355781879291 0.16519016 0.3737719 prediction 0.72322946204037 Functional Gain - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3019748 chr6:3019749 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_20212 0 0 1 0 1 Ribosome 0.438718378580545 0.438717009603647 0 0 hPsi_site_13936 iPseU_CNN:0;iRNA_PseU:0 13937 chr1 154951413 154951413 1 + G A rs6910 154951412 + 154951392 154951432 41 CTGGTAACTGCTTTGCTTCTTGAGTAGAGCCACCACCACCA CTGGTAACTGCTTTGCTTCTTAAGTAGAGCCACCACCACCA < 41bp 0.497543768572471 0.861610239030656 0.21444625 0.37725502 prediction 0.723220478061312 Functional Gain - CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951412 chr1:154951413 . . 0 22 hPsi_associated_SNPs_20213 0 0 1 0 0 Ribosome 0.438718261906214 0.438718943527476 0 0 hPsi_site_13937 iPseU_CNN:0;iRNA_PseU:0 13938 chr13 28498656 28498656 1 + G A rs137852787 28498655 + 28498635 28498675 41 GGTGGCGGGGTCGCGGAGCCTGAGCAGGACTGCGCCGTGAC GGTGGCGGGGTCGCGGAGCCTAAGCAGGACTGCGCCGTGAC < 41bp 0.49086044227939 0.861609065290711 0.3193969 0.46034658 prediction 0.723218130581421 Functional Gain - PDX1 ENSG00000139515 CDS Human protein_coding chr13:28498655 chr13:28498656 nonsynonymous SNV 0.635 3 22 hPsi_associated_SNPs_20214 2 0 0 0 0 exosome 0.438718594231997 0.438718830952658 0 0 hPsi_site_13938 iPseU_CNN:0;iRNA_PseU:0 13939 chr16 57416399 57416399 1 + G A CESC 57416398 + 57416378 57416418 41 TGGGCTGAGGCAAAGACCTCTGAGGCCCCGTCCACCCAGGA TGGGCTGAGGCAAAGACCTCTAAGGCCCCGTCCACCCAGGA < 41bp 0.483450750080963 0.861605018821763 0.29621112 0.59299016 prediction 0.723210037643526 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416398 chr16:57416399 nonsynonymous SNV 0.037 1 22 hPsi_associated_SNPs_20215 0 0 1 0 0 nucleus 0.438754230891558 0.438718553472982 0.18598032 0 hPsi_site_13939 iPseU_CNN:0.18598032;iRNA_PseU:0 13940 chr20 57599404 57599404 1 + G A SKCM 57599403 + 57599383 57599423 41 GCTGCCTGTGACCTCCGCCGTGGCCGCTACCTCACAGTGGC GCTGCCTGTGACCTCCGCCGTAGCCGCTACCTCACAGTGGC < 41bp 0.471139182190669 0.861576970022402 0.13897195 0.4769646 prediction 0.723153940044805 Functional Gain - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57599403 chr20:57599404 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20216 0 0 0 0 0 Cytosol 0.438718763463019 0.438715111286151 0 0 hPsi_site_13940 iPseU_CNN:0;iRNA_PseU:0 13941 chr7 37988572 37988572 1 + G A HNSC 37988571 + 37988551 37988591 41 ATTCCTCAAAACTCCACCTTTGAAGACCAGTACTCCATCGG ATTCCTCAAAACTCCACCTTTAAAGACCAGTACTCCATCGG < 41bp 0.51575813658072 0.877295338916984 0.4022583 0.80863047 prediction 0.723074404672528 Functional Gain - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37988571 chr7:37988572 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20217 0 0 1 0 1 Ribosome 0.440400265748937 0.437744798781298 0.61726094 0 hPsi_site_13941 iPseU_CNN:0.61726094;iRNA_PseU:0 13942 chr8 120977615 120977615 1 + G A OV 120977614 + 120977594 120977634 41 GGAAAGAGGCAGAGCAGCTTTGCCACCGGCTTATGGAGCAT GGAAAGAGGCAGAGCAGCTTTACCACCGGCTTATGGAGCAT < 41bp 0.52288724634448 0.884401158505881 0.265024 0.34264192 prediction 0.723027824322801 Functional Gain - DEPTOR ENSG00000155792 CDS Human protein_coding chr8:120977614 chr8:120977615 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20218 0 0 0 0 1 exosome 0.439491723867404 0.393700001882713 0 0 hPsi_site_13942 iPseU_CNN:0;iRNA_PseU:0 13943 chr7 74564132 74564132 1 + G A COAD 74564131 + 74564111 74564151 41 GGCACCCCAGCGATGGTGGATGCCAATAACGGGCTTGTCAC GGCACCCCAGCGATGGTGGATACCAATAACGGGCTTGTCAC < 41bp 0.518905512002472 0.880414307185904 0.26262295 0.42122713 prediction 0.723017590366863 Functional Gain - GTF2IRD2;GTF2IRD2B ENSG00000174428 CDS Human protein_coding chr7:74564131 chr7:74564132 nonsynonymous SNV 0.043 0 22 hPsi_associated_SNPs_20219 0 0 0 0 0 unknown 0.438806108291855 0.439541176170142 0 0 hPsi_site_13943 iPseU_CNN:0;iRNA_PseU:0 13944 chr11 68678967 68678967 1 + G A STAD 68678966 + 68678946 68678986 41 CAGAAAGAAGCGGTTTTATTTGCGCTGTCTCAGAAAGAACT CAGAAAGAAGCGGTTTTATTTACGCTGTCTCAGAAAGAACT < 41bp 0.478296904347847 0.861505136118804 0.47790596 0.5798773 prediction 0.723010272237608 Functional Gain - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68678966 chr11:68678967 nonsynonymous SNV 0.810 3 22 hPsi_associated_SNPs_20220 0 0 1 0 1 chromatin 0.438529277466804 0.438973647648788 0.1597546 0 hPsi_site_13944 iPseU_CNN:0.1597546;iRNA_PseU:0 13945 chr19 54445523 54445523 1 + G A UCEC 54445522 + 54445502 54445542 41 CATCAAGTACCCGGACCACCTGCACATCTCCACCTCGCCCT CATCAAGTACCCGGACCACCTACACATCTCCACCTCGCCCT < 41bp 0.510611943216169 0.872115362897219 0.42202592 0.74960065 prediction 0.723006839362101 Functional Gain - CACNG7 ENSG00000105605 CDS Human protein_coding chr19:54445522 chr19:54445523 synonymous SNV . 0 22 hPsi_associated_SNPs_20221 0 0 0 0 0 unknown 0.438718616512174 0.438689469713965 0.4992013 0 hPsi_site_13945 iPseU_CNN:0.4992013;iRNA_PseU:0 13946 chr3 122002728 122002728 1 + G A PRAD 122002727 + 122002707 122002747 41 AAGTTCCGCAACACACCCATTGTCAAGGCCACCAACCGAGA AAGTTCCGCAACACACCCATTATCAAGGCCACCAACCGAGA < 41bp 0.476802062690708 0.861502169483882 0.47955883 0.7515312 prediction 0.723004338967765 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:122002727 chr3:122002728 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_20222 0 0 0 0 0 exosome 0.438748955005009 0.433864993552287 0.5030624 0 hPsi_site_13946 iPseU_CNN:0.5030624;iRNA_PseU:0 13947 chr15 75185642 75185642 1 + G A CESC 75185641 + 75185621 75185661 41 GGAACAGCTCAACCTGTTGGTGAAGCGGATCTCCCAGCAAG GGAACAGCTCAACCTGTTGGTAAAGCGGATCTCCCAGCAAG < 41bp 0.4894719329262 0.861500768372374 0.27678776 0.83421147 prediction 0.723001536744748 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75185641 chr15:75185642 synonymous SNV . 0 22 hPsi_associated_SNPs_20223 0 0 1 0 1 Ribosome 0.438713540924096 0.438718648107655 0.66842294 0 hPsi_site_13947 iPseU_CNN:0.66842294;iRNA_PseU:0 13948 chr1 44137442 44137442 1 + G A STAD 44137441 + 44137421 44137461 41 GGGCAAACGGGAGTTCTCACTGTGCACAGTTATGCCAAAGG GGGCAAACGGGAGTTCTCACTATGCACAGTTATGCCAAAGG < 41bp 0.483487182264514 0.861486411618152 0.26363862 0.27571005 prediction 0.722972823236304 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44137441 chr1:44137442 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_20224 0 0 1 0 0 Nucleus 0.438715158079534 0.438756663584422 0 0 hPsi_site_13948 iPseU_CNN:0;iRNA_PseU:0 13949 chr16 57254721 57254721 1 + G A LGG 57254720 + 57254700 57254740 41 GCCATGCTGAATAGCAATGATGTCAGCGAGTACCTGAAGAT GCCATGCTGAATAGCAATGATATCAGCGAGTACCTGAAGAT < 41bp 0.515322139938311 0.876794861449842 0.18849263 0.4299085 prediction 0.722945443023062 Functional Gain - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57254720 chr16:57254721 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20225 0 0 1 0 2 Ribosome 0.446706527308462 0.443015787624075 0 0 hPsi_site_13949 iPseU_CNN:0;iRNA_PseU:0 13950 chr11 562206 562206 1 + G A CESC 562205 + 562185 562225 41 CAGCGATGTCCAGTTTGTCCTGAGGCGCACAGGGCCCAGCC CAGCGATGTCCAGTTTGTCCTAAGGCGCACAGGGCCCAGCC < 41bp 0.478698547818639 0.861465326277609 0.29626507 0.3409216 prediction 0.722930652555219 Functional Gain - RASSF7 ENSG00000099849 CDS Human protein_coding chr11:562205 chr11:562206 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_20226 0 0 0 0 0 exosome 0.43871427332674 0.438718593113382 0 0 hPsi_site_13950 iPseU_CNN:0;iRNA_PseU:0 13951 chr3 9876553 9876553 1 + G A SKCM 9876552 + 9876532 9876572 41 ATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACCCAG ATTTCCCTCCCACCGAACCTTAATTTCAAGGTGGCACCCAG < 41bp 0.499380724367064 0.861463681714578 0.20610577 0.31516242 prediction 0.722927363429157 Functional Gain - TTLL3 ENSG00000214021 CDS Human protein_coding chr3:9876552 chr3:9876553 nonsynonymous SNV 0.972 1 22 hPsi_associated_SNPs_20227 0 0 1 1 0 chromatin 0.438718592995102 0.438718592989299 0 0 hPsi_site_13951 iPseU_CNN:0;iRNA_PseU:0 13952 chr1 153005032 153005032 1 + G A CESC 153005031 + 153005011 153005051 41 CCATGCCACCCCAAGGTGCCTGAGCCCTGCCCTTCAATAGT CCATGCCACCCCAAGGTGCCTAAGCCCTGCCCTTCAATAGT < 41bp 0.508781568784024 0.870235357250447 0.31246078 0.6751875 prediction 0.722907576932848 Functional Gain - SPRR1B ENSG00000169469 CDS Human protein_coding chr1:153005031 chr1:153005032 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_20228 0 0 0 1 0 exosome 0.438718593282894 0.438718592995102 0.350375 0 hPsi_site_13952 iPseU_CNN:0.350375;iRNA_PseU:0 13953 chr2 150327269 150327269 1 + G A UCEC 150327268 + 150327248 150327288 41 AATGAAACTGATGCCACATTTGCCACGACGTCACCTATAAA AATGAAACTGATGCCACATTTACCACGACGTCACCTATAAA < 41bp 0.501990265519884 0.863442984710818 0.2986032 0.45379016 prediction 0.722905438381869 Functional Gain - LYPD6 ENSG00000187123 CDS Human protein_coding chr2:150327268 chr2:150327269 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_20229 0 0 0 0 1 Cytosol 0.43879536916019 0.445087354581579 0 0 hPsi_site_13953 iPseU_CNN:0;iRNA_PseU:0 13954 chr3 183858347 183858347 1 + G A HNSC 183858346 + 183858326 183858366 41 ACCCCAGAGGCGAACTTCACTGACAGCACCACCCAGAGCTG ACCCCAGAGGCGAACTTCACTAACAGCACCACCCAGAGCTG < 41bp 0.472337179508147 0.861448833018658 0.32549524 0.5026705 prediction 0.722897666037317 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183858346 chr3:183858347 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_20230 0 0 1 0 0 Ribosome 0.447366737144884 0.440743334362554 0.00534100000000004 0 hPsi_site_13954 iPseU_CNN:0.00534100000000004;iRNA_PseU:0 13955 chr3 184044703 184044703 1 + G A BLCA 184044702 + 184044682 184044722 41 TCGCCCAGCTACTAGTACTTTGAATCGCTTCTCAGCCCTTC TCGCCCAGCTACTAGTACTTTAAATCGCTTCTCAGCCCTTC < 41bp 0.51297549344215 0.874423937406646 0.34084094 0.6462435 prediction 0.722896887928991 Functional Gain - EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184044702 chr3:184044703 synonymous SNV . 0 22 hPsi_associated_SNPs_20231 0 0 1 0 2 Nucleus 0.4387185982084 0.438718593009619 0.292487 0 hPsi_site_13955 iPseU_CNN:0.292487;iRNA_PseU:0 13956 chr10 102242180 102242180 1 + G A BLCA 102242179 + 102242159 102242199 41 AGCACTCAAGGTGGACCTGCTGCAGGGTGCTGGCAACAGCG AGCACTCAAGGTGGACCTGCTACAGGGTGCTGGCAACAGCG < 41bp 0.491383624496406 0.861448438446853 0.5366157 0.83045065 prediction 0.722896876893705 Functional Gain - WNT8B ENSG00000075290 CDS Human protein_coding chr10:102242179 chr10:102242180 synonymous SNV . 0 22 hPsi_associated_SNPs_20232 0 0 0 0 0 exosome 0.439558019439114 0.438197633042969 0.5876699 0 hPsi_site_13956 iPseU_CNN:0.5876699;iRNA_PseU:0 13957 chr1 147381094 147381094 1 + G A HNSC 147381093 + 147381073 147381113 41 GTGGAGGGCGAGGGGCCGCCTGCAGAGGAGGGAGCCGAACC GTGGAGGGCGAGGGGCCGCCTACAGAGGAGGGAGCCGAACC < 41bp 0.489914668649393 0.86144129709441 0.29758078 0.31743938 prediction 0.722882594188821 Functional Gain - GJA8 ENSG00000121634 CDS Human protein_coding chr1:147381093 chr1:147381094 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_20233 0 0 0 0 0 unknown 0.438718592989554 0.438718590867659 0 0 hPsi_site_13957 iPseU_CNN:0;iRNA_PseU:0 13958 chr6 43250515 43250515 1 + G A rs55968848 43250514 + 43250494 43250534 41 GAATGGCCTCCCACGAGCTGTGCCTCTGAGTCTGCCCTACC GAATGGCCTCCCACGAGCTGTACCTCTGAGTCTGCCCTACC < 41bp 0.524220473259886 0.885661146027884 0.25625607 0.7228291 prediction 0.722881345535996 Functional Gain - TTBK1 ENSG00000146216 CDS Human protein_coding chr6:43250514 chr6:43250515 synonymous SNV . 0 22 hPsi_associated_SNPs_20234 0 0 0 0 0 exosome 0.438718568788822 0.438636323532026 0.4456582 0 hPsi_site_13958 iPseU_CNN:0.4456582;iRNA_PseU:0 13959 chr6 84233727 84233727 1 + G A SKCM 84233726 + 84233706 84233746 41 AAAGCTAAGGGTAGGGTTGTTGAAGATGAGGAATAAAAGTG AAAGCTAAGGGTAGGGTTGTTAAAGATGAGGAATAAAAGTG < 41bp 0.482841128997284 0.861436923160841 0.3097886 0.42010808 prediction 0.722873846321682 Functional Gain - PRSS35 ENSG00000146250 CDS Human protein_coding chr6:84233726 chr6:84233727 synonymous SNV . 0 22 hPsi_associated_SNPs_20235 0 0 0 0 0 exosome 0.438718958154615 0.438718597698025 0 0 hPsi_site_13959 iPseU_CNN:0;iRNA_PseU:0 13960 chr3 32483359 32483359 1 + G A STAD 32483358 + 32483338 32483378 41 CTGCTGATTGCCTTCATCTGTGTGCGGAGCTCCCTGTGGAC CTGCTGATTGCCTTCATCTGTATGCGGAGCTCCCTGTGGAC < 41bp 0.518195093270467 0.879625691318275 0.2915944 0.38916263 prediction 0.722861196095617 Functional Gain - CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32483358 chr3:32483359 nonsynonymous SNV 0.329 3 22 hPsi_associated_SNPs_20236 0 0 1 0 1 Ribosome 0.438718278533045 0.438718588278264 0 0 hPsi_site_13960 iPseU_CNN:0;iRNA_PseU:0 13961 chr6 36882373 36882373 1 + G A STAD 36882372 + 36882352 36882392 41 AAGAGATTCAGCATTTTTTGTGCCAGTACCCTGAGGCGACA AAGAGATTCAGCATTTTTTGTACCAGTACCCTGAGGCGACA < 41bp 0.474627743130497 0.861429895199493 0.26267684 0.34751263 prediction 0.722859790398987 Functional Gain - C6orf89 ENSG00000198663 CDS Human protein_coding chr6:36882372 chr6:36882373 nonsynonymous SNV 0.492 0 22 hPsi_associated_SNPs_20237 0 0 1 0 2 Endoplasmic reticulum 0.439545477616047 0.43872335026643 0 0 hPsi_site_13961 iPseU_CNN:0;iRNA_PseU:0 13962 chr5 434886 434886 1 + G A UCEC 434885 + 434865 434905 41 GGGAATGGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCA GGGAATGGTGCCCGGGATGTTACCCAAAAGTGCCTTGGCCA < 41bp 0.485235802865836 0.861429124356724 0.2929201 0.75981987 prediction 0.722858248713449 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:434885 chr5:434886 synonymous SNV . 0 22 hPsi_associated_SNPs_20238 0 0 0 0 0 chromatin 0.438718574687371 0.438718566155922 0.51963974 0 hPsi_site_13962 iPseU_CNN:0.51963974;iRNA_PseU:0 13963 chr19 47492838 47492838 1 + G A BLCA 47492837 + 47492817 47492857 41 GGCAGAGAAAGACTTTACGGTGAATACCGTGGCTGGTGCCA GGCAGAGAAAGACTTTACGGTAAATACCGTGGCTGGTGCCA < 41bp 0.514596025237447 0.876020999079314 0.2534848 0.6057668 prediction 0.722849947683736 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47492837 chr19:47492838 synonymous SNV . 0 22 hPsi_associated_SNPs_20239 0 0 1 0 2 Ribosome 0.441498520061048 0.438717458633856 0.2115336 0 hPsi_site_13963 iPseU_CNN:0.2115336;iRNA_PseU:0 13964 chr18 29797830 29797830 1 + G A UCEC 29797829 + 29797809 29797849 41 TCATCTACTGTTGCTGTGTTTGCCTTGATGCTGATCATCAC TCATCTACTGTTGCTGTGTTTACCTTGATGCTGATCATCAC < 41bp 0.515376947325726 0.876798397647929 0.2598732 0.32626802 prediction 0.722842900644406 Functional Gain - MEP1B ENSG00000141434 CDS Human protein_coding chr18:29797829 chr18:29797830 nonsynonymous SNV 0.023 0 22 hPsi_associated_SNPs_20240 0 0 0 0 1 exosome 0.439568528620742 0.439411360574322 0 0 hPsi_site_13964 iPseU_CNN:0;iRNA_PseU:0 13965 chr17 40695180 40695180 1 + G A BLCA 40695179 + 40695159 40695199 41 CTGGTTCTGGACCTGTTTGCTGAGAGCCAGCCTGTGTATAC CTGGTTCTGGACCTGTTTGCTAAGAGCCAGCCTGTGTATAC < 41bp 0.490685693002294 0.861414512592813 0.37946397 0.94646555 prediction 0.722829025185626 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695179 chr17:40695180 nonsynonymous SNV 0.728 5 22 hPsi_associated_SNPs_20241 0 0 1 0 0 Endoplasmic reticulum 0.445210394788344 0.43858365934365 0.8929311 0 hPsi_site_13965 iPseU_CNN:0.8929311;iRNA_PseU:0 13966 chr6 33243622 33243622 1 + G A BLCA 33243621 + 33243601 33243641 41 GTGTTGAGGAAAGCAGACATTGACCTCACCAAGAGGGCGGG GTGTTGAGGAAAGCAGACATTAACCTCACCAAGAGGGCGGG < 41bp 0.49315723593208 0.861403481758315 0.24412999 0.31551176 prediction 0.72280696351663 Functional Gain - RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243621 chr6:33243622 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_20242 0 0 1 0 1 Cytosol 0.438782942639466 0.436725511356311 0 0 hPsi_site_13966 iPseU_CNN:0;iRNA_PseU:0 13967 chrX 153171320 153171320 1 + G A ESCA 153171319 + 153171299 153171339 41 GGCCGTGAAGTATCTGCAGATGGTGGGCATGTATGCCTCCT GGCCGTGAAGTATCTGCAGATAGTGGGCATGTATGCCTCCT < 41bp 0.512750301014565 0.874151755360407 0.263598 0.56967777 prediction 0.722802908691683 Functional Gain - AVPR2 ENSG00000126895 CDS Human protein_coding chrX:153171319 chrX:153171320 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20243 0 0 0 0 0 exosome 0.438721238161126 0.43871859270278 0.13935554 0 hPsi_site_13967 iPseU_CNN:0.13935554;iRNA_PseU:0 13968 chr8 125464363 125464363 1 + G A STAD 125464362 + 125464342 125464382 41 TGGCAAAGGTGGGCAGAATCTGCAGAAACTCGAATCGCCAC TGGCAAAGGTGGGCAGAATCTACAGAAACTCGAATCGCCAC < 41bp 0.495092922796282 0.861400909803421 0.49556988 0.6937454 prediction 0.722801819606841 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125464362 chr8:125464363 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_20244 0 0 1 0 0 Cytosol 0.438718584351863 0.438718213403957 0.3874908 0 hPsi_site_13968 iPseU_CNN:0.3874908;iRNA_PseU:0 13969 chr15 79186545 79186545 1 + G A CESC 79186544 + 79186524 79186564 41 GCACCCATGTCCCAGGTGTATGGAGCGCCACATCTCCTGAG GCACCCATGTCCCAGGTGTATAGAGCGCCACATCTCCTGAG < 41bp 0.482665758857824 0.861399653763317 0.22863597 0.33391958 prediction 0.722799307526633 Functional Gain - MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79186544 chr15:79186545 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_20245 0 0 0 0 1 Nucleus 0.438718401467946 0.438718592995042 0 0 hPsi_site_13969 iPseU_CNN:0;iRNA_PseU:0 13970 chr19 15198393 15198393 1 + G A SKCM 15198392 + 15198372 15198412 41 CTGACCTTCTGCGCCGGCTCTGAAATCTCCCACTTCTTCTG CTGACCTTCTGCGCCGGCTCTAAAATCTCCCACTTCTTCTG < 41bp 0.510060332228853 0.87144904997839 0.26761866 0.57129997 prediction 0.722777435499075 Functional Gain - OR1I1 ENSG00000094661 CDS Human protein_coding chr19:15198392 chr19:15198393 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20246 0 0 0 0 0 unknown 0.438718407463341 0.438718104962591 0.14259994 0 hPsi_site_13970 iPseU_CNN:0.14259994;iRNA_PseU:0 13971 chr5 180377112 180377112 1 + G A LUAD 180377111 + 180377091 180377131 41 TAAAAGGTGGCGCGTGGGAGTGTGCCGGGATGATGTGGACA TAAAAGGTGGCGCGTGGGAGTATGCCGGGATGATGTGGACA < 41bp 0.483957729091344 0.861382869291816 0.24044737 0.52645147 prediction 0.722765738583632 Functional Gain - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180377111 chr5:180377112 synonymous SNV . 0 22 hPsi_associated_SNPs_20247 0 0 0 0 0 chromatin 0.438717447454984 0.438718076233927 0.0529029400000001 0 hPsi_site_13971 iPseU_CNN:0.0529029400000001;iRNA_PseU:0 13972 chr3 9859380 9859380 1 + G A LUSC 9859379 + 9859359 9859399 41 CCGTGGTTTGATGAGGTTGATGCCAACTCCTTCTTCCCACG CCGTGGTTTGATGAGGTTGATACCAACTCCTTCTTCCCACG < 41bp 0.500817862006697 0.862194844315146 0.32791758 0.7107649 prediction 0.722753964616897 Functional Gain - ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9859379 chr3:9859380 nonsynonymous SNV 0.970 0 22 hPsi_associated_SNPs_20248 0 0 1 0 1 unknown 0.438718593047692 0.438718653934288 0.4215298 0 hPsi_site_13972 iPseU_CNN:0.4215298;iRNA_PseU:0 13973 chr21 45540313 45540313 1 + G A STAD 45540312 + 45540292 45540332 41 GTGACCGGTGTGACCTTTACTGCCACCGGCTACGTTGTGGT GTGACCGGTGTGACCTTTACTACCACCGGCTACGTTGTGGT < 41bp 0.470337562062391 0.861372596088631 0.30375272 0.77064615 prediction 0.722745192177262 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45540312 chr21:45540313 nonsynonymous SNV 0.255 0 22 hPsi_associated_SNPs_20249 0 0 1 0 2 Nucleus 0.438718595771141 0.438718603124121 0.5412923 0 hPsi_site_13973 iPseU_CNN:0.5412923;iRNA_PseU:0 13974 chr20 62324306 62324306 1 + G A LIHC 62324305 + 62324285 62324325 41 ACTTCGCCGCCCTGGCCGCCTGTCTCGGCCCCCTCTTTGCT ACTTCGCCGCCCTGGCCGCCTATCTCGGCCCCCTCTTTGCT < 41bp 0.515186186421051 0.876558746649857 0.3272946 0.5851992 prediction 0.722745120457613 Functional Gain - RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62324305 chr20:62324306 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20250 0 0 1 0 1 chromatin 0.438718592886472 0.438718591093082 0.1703984 0 hPsi_site_13974 iPseU_CNN:0.1703984;iRNA_PseU:0 13975 chr17 80885108 80885108 1 + G A rs182107545 80885107 + 80885087 80885127 41 GCAGGAGCCCCAGACGAAGCTGTGTGCGGAGAGAATGTTTC GCAGGAGCCCCAGACGAAGCTATGTGCGGAGAGAATGTTTC < 41bp 0.521772852317202 0.883126243104305 0.2603485 0.41904777 prediction 0.722706781574205 Functional Gain - TBCD ENSG00000141556 CDS Human protein_coding chr17:80885107 chr17:80885108 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_20251 0 0 1 0 2 Nucleus 0.4387186261627 0.438718598964495 0 0 hPsi_site_13975 iPseU_CNN:0;iRNA_PseU:0 13976 chr21 47660848 47660848 1 + G A UCEC 47660847 + 47660827 47660867 41 CTCCCCTCTTGAGCACACTCTGTGCTCCTCTTCCAGTTACG CTCCCCTCTTGAGCACACTCTATGCTCCTCTTCCAGTTACG < 41bp 0.478659520016809 0.861352347204378 0.32441366 0.39560315 prediction 0.722704694408757 Functional Gain - MCM3AP ENSG00000160294 CDS Human protein_coding chr21:47660847 chr21:47660848 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20252 0 0 1 0 1 Nucleus 0.438672766898539 0.438716720428356 0 0 hPsi_site_13976 iPseU_CNN:0;iRNA_PseU:0 13977 chr17 41003699 41003699 1 + G A BLCA 41003698 + 41003678 41003718 41 GGCTGCAGCCCTGGCTCACTTGGACAGGGGGAGCCCCCCAC GGCTGCAGCCCTGGCTCACTTAGACAGGGGGAGCCCCCCAC < 41bp 0.467874514731234 0.861341045009626 0.28005052 0.5649571 prediction 0.722682090019251 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41003698 chr17:41003699 synonymous SNV . 0 22 hPsi_associated_SNPs_20253 0 0 0 0 0 Cytosol 0.438718592995102 0.438718735910483 0.1299142 0 hPsi_site_13977 iPseU_CNN:0.1299142;iRNA_PseU:0 13978 chr1 110592108 110592108 1 + G A BLCA 110592107 + 110592087 110592127 41 ATACATGGCCCAGCACCTGGTGTTTGCCAACTGCATTCCTT ATACATGGCCCAGCACCTGGTATTTGCCAACTGCATTCCTT < 41bp 0.518412882348857 0.879746480510968 0.3006334 0.67619616 prediction 0.722667196324222 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110592107 chr1:110592108 synonymous SNV . 0 22 hPsi_associated_SNPs_20254 0 0 1 0 2 Cytosol 0.438706662636731 0.438716309690857 0.35239232 0 hPsi_site_13978 iPseU_CNN:0.35239232;iRNA_PseU:0 13979 chr19 15784417 15784417 1 + G A SKCM 15784416 + 15784396 15784436 41 GCTACTCCTGCTGCTGGTTGTGGGCTCCTGGCTACTCGCCC GCTACTCCTGCTGCTGGTTGTAGGCTCCTGGCTACTCGCCC < 41bp 0.476501423019921 0.861319965873462 0.35173512 0.7036743 prediction 0.722639931746924 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15784416 chr19:15784417 synonymous SNV . 0 22 hPsi_associated_SNPs_20255 0 0 1 0 1 exosome 0.438865847740527 0.438718307664177 0.4073486 0 hPsi_site_13979 iPseU_CNN:0.4073486;iRNA_PseU:0 13980 chr1 16373092 16373092 1 + G A UCEC 16373091 + 16373071 16373111 41 CTCCGGTATCTCTCCTGGACTGTGTACCCTGTGGCCCTCGT CTCCGGTATCTCTCCTGGACTATGTACCCTGTGGCCCTCGT < 41bp 0.516380727234257 0.877695241108273 0.32123756 0.32016328 prediction 0.722629027748031 Functional Gain - CLCNKB ENSG00000184908 CDS Human protein_coding chr1:16373091 chr1:16373092 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_20256 0 0 0 0 2 exosome 0.438685826314015 0.438718504839411 0 0 hPsi_site_13980 iPseU_CNN:0;iRNA_PseU:0 13981 chr4 134072279 134072279 1 + G A STAD 134072278 + 134072258 134072298 41 CCCAGTGTACCAAGTGTACGTGCAAGCCAAGGACCTGGGCC CCCAGTGTACCAAGTGTACGTACAAGCCAAGGACCTGGGCC < 41bp 0.485602058788666 0.861311551004526 0.84970057 0.9846627 prediction 0.722623102009053 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134072278 chr4:134072279 synonymous SNV . 0 22 hPsi_associated_SNPs_20257 0 0 1 0 0 cytosol 0.4387178039087 0.438692759288315 0.26992426 0 hPsi_site_13981 iPseU_CNN:0.26992426;iRNA_PseU:0 13982 chr7 100212805 100212805 1 + G A BLCA 100212804 + 100212784 100212824 41 CCATGGTGTTCCTCCGGACCTGAGCTCCGTGCTCAACCCCC CCATGGTGTTCCTCCGGACCTAAGCTCCGTGCTCAACCCCC < 41bp 0.494526121406118 0.861304967985384 0.30492938 0.7764807 prediction 0.722609935970769 Functional Gain - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100212804 chr7:100212805 synonymous SNV . 0 22 hPsi_associated_SNPs_20258 0 0 1 0 1 Cytosol 0.438706792805209 0.439115904051078 0.5529614 0 hPsi_site_13982 iPseU_CNN:0.5529614;iRNA_PseU:0 13983 chr22 23438225 23438225 1 + G A BLCA 23438224 + 23438204 23438244 41 TTTGCGCTGACGGGCCCCGCTGAGAGCAAGGGCGAGATCAC TTTGCGCTGACGGGCCCCGCTAAGAGCAAGGGCGAGATCAC < 41bp 0.514516279306702 0.875819836930298 0.27094227 0.5395263 prediction 0.722607115247191 Functional Gain - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438224 chr22:23438225 nonsynonymous SNV 0.378 1 22 hPsi_associated_SNPs_20259 0 0 0 0 0 Ribosome 0.438769709529993 0.438718592155466 0.0790526 0 hPsi_site_13983 iPseU_CNN:0.0790526;iRNA_PseU:0 13984 chr1 31906918 31906918 1 + G A LUSC 31906917 + 31906897 31906937 41 ATGGTGTGTTCCAGGCCCGGTGAGACCCGGAAGATGATCAG ATGGTGTGTTCCAGGCCCGGTAAGACCCGGAAGATGATCAG < 41bp 0.497196003036076 0.861295124862418 0.34986418 0.7834387 prediction 0.722590249724837 Functional Gain - SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31906917 chr1:31906918 nonsynonymous SNV 0.518 0 22 hPsi_associated_SNPs_20260 0 0 0 0 1 Endoplasmic reticulum 0.438718594605963 0.438718593331803 0.5668774 0 hPsi_site_13984 iPseU_CNN:0.5668774;iRNA_PseU:0 13985 chr16 30594027 30594027 1 + G A SKCM 30594026 + 30594006 30594046 41 AGGAGCGGTGGATCCACCGATGGGCTTCCAGGGCGGTCTTG AGGAGCGGTGGATCCACCGATAGGCTTCCAGGGCGGTCTTG < 41bp 0.500744000223237 0.862038813226312 0.23311561 0.2921888 prediction 0.722589626006149 Functional Gain - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594026 chr16:30594027 nonsynonymous SNV 0.027 4 22 hPsi_associated_SNPs_20261 0 0 0 0 0 Nucleus 0.438718592995088 0.438718593459349 0 0 hPsi_site_13985 iPseU_CNN:0;iRNA_PseU:0 13986 chr8 118543004 118543004 1 + G A STAD 118543003 + 118542983 118543023 41 GAAGATGGCTCAAAGAATGATGATCGGGCTGGCCCACCTCG GAAGATGGCTCAAAGAATGATAATCGGGCTGGCCCACCTCG < 41bp 0.485977079536769 0.86129360045979 0.31333813 0.57597727 prediction 0.72258720091958 Functional Gain - MED30 ENSG00000164758 CDS Human protein_coding chr8:118543003 chr8:118543004 nonsynonymous SNV 0.872 0 22 hPsi_associated_SNPs_20262 0 0 1 0 2 Ribosome 0.438889946978041 0.438718602899502 0.15195454 0 hPsi_site_13986 iPseU_CNN:0.15195454;iRNA_PseU:0 13987 chr1 53542952 53542952 1 + G A LGG 53542951 + 53542931 53542971 41 CAACGTCGAGGTCCTCATCCTGTCCAGCAACTTCCTGCGCC CAACGTCGAGGTCCTCATCCTATCCAGCAACTTCCTGCGCC < 41bp 0.472568371623649 0.861278733333541 0.32089838 0.7675618 prediction 0.722557466667082 Functional Gain - PODN ENSG00000174348 CDS Human protein_coding chr1:53542951 chr1:53542952 synonymous SNV . 0 22 hPsi_associated_SNPs_20263 0 0 0 0 2 Cytosol 0.438718714778035 0.438719194757243 0.5351236 0 hPsi_site_13987 iPseU_CNN:0.5351236;iRNA_PseU:0 13988 chr14 69818873 69818873 1 + G A UCEC 69818872 + 69818852 69818892 41 GGCCCAGCAGTGGCAGCTGTTGCCACACACATGACGGTAGC GGCCCAGCAGTGGCAGCTGTTACCACACACATGACGGTAGC < 41bp 0.509083071665101 0.870340764183054 0.4027418 0.7585166 prediction 0.722515385035905 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69818872 chr14:69818873 synonymous SNV . 0 22 hPsi_associated_SNPs_20264 0 0 0 0 1 chromatin 0.43183045024255 0.431919206307876 0.5170332 0 hPsi_site_13988 iPseU_CNN:0.5170332;iRNA_PseU:0 13989 chr15 74560730 74560730 1 + G A ESCA 74560729 + 74560709 74560749 41 AGCCACTGCCAAGACCCAGTTGTACGCAACAGTCGTTCGGA AGCCACTGCCAAGACCCAGTTATACGCAACAGTCGTTCGGA < 41bp 0.461865712802676 0.861257541052539 0.33307087 0.6970661 prediction 0.722515082105078 Functional Gain - CCDC33 ENSG00000140481 CDS Human protein_coding chr15:74560729 chr15:74560730 synonymous SNV . 0 22 hPsi_associated_SNPs_20265 0 0 0 0 2 exosome 0.438719403654746 0.438718293334263 0.3941322 0 hPsi_site_13989 iPseU_CNN:0.3941322;iRNA_PseU:0 13990 chr19 51920652 51920652 1 + C T LUAD 51920653 - 51920633 51920673 41 AGTGATGGTGCCGGAGGGCCTGTGCATCTCTGTGCCCTGCT AGTGATGGTGCCGGAGGGCCTATGCATCTCTGTGCCCTGCT < 41bp 0.478994263044998 0.861257028956417 0.61581695 0.68986624 prediction 0.722514057912835 Functional Gain - SIGLEC10 ENSG00000142512 CDS Human protein_coding chr19:51920653 chr19:51920652 synonymous SNV . 0 22 hPsi_associated_SNPs_20266 0 0 0 0 0 exosome 0.438718592872528 0.438718592994444 0.14809858 0 hPsi_site_13990 iPseU_CNN:0.14809858;iRNA_PseU:0 13991 chr19 58967434 58967434 1 + G A UCEC 58967433 + 58967413 58967453 41 CCTTATGCTTGCGCACAGTGTGGCCGCCGCTTCTGCCGCAA CCTTATGCTTGCGCACAGTGTAGCCGCCGCTTCTGCCGCAA < 41bp 0.507086873731829 0.868340117326385 0.29779738 0.767385 prediction 0.722506487189112 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58967433 chr19:58967434 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_20267 0 0 0 0 0 exosome 0.438712445753328 0.438718451678807 0.53477 0 hPsi_site_13991 iPseU_CNN:0.53477;iRNA_PseU:0 13992 chr8 22475940 22475940 1 + G A SKCM 22475939 + 22475919 22475959 41 TTCTTTGATGCCAACTGGTGTGGCTACTTGCACCGGCGAGA TTCTTTGATGCCAACTGGTGTAGCTACTTGCACCGGCGAGA < 41bp 0.520930831465193 0.882179877918109 0.47009233 0.53199047 prediction 0.722498092905831 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22475939 chr8:22475940 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20268 0 0 1 0 2 Nucleus 0.438731776357642 0.438597675559275 0.06398094 0 hPsi_site_13992 iPseU_CNN:0.06398094;iRNA_PseU:0 13993 chr17 34431322 34431322 1 + G A LUSC 34431321 + 34431301 34431341 41 GAAGCTCTGCGTGACTGTCCTGTCTCTCCTCATGCTAGTAG GAAGCTCTGCGTGACTGTCCTATCTCTCCTCATGCTAGTAG < 41bp 0.491403198512173 0.86122746088794 0.24992797 0.6364549 prediction 0.72245492177588 Functional Gain - CCL4 ENSG00000129277 CDS Human other chr17:34431321 chr17:34431322 synonymous SNV . 0 22 hPsi_associated_SNPs_20269 0 0 0 2 1 exosome 0.43877380666919 0.438727639413242 0.2729098 0 hPsi_site_13993 iPseU_CNN:0.2729098;iRNA_PseU:0 13994 chr2 220412520 220412520 1 + G A UCEC 220412519 + 220412499 220412539 41 GTGGGGTCCACTGGGGCTGTTGCTGGGGGGCGGCCTGCTCT GTGGGGTCCACTGGGGCTGTTACTGGGGGGCGGCCTGCTCT < 41bp 0.517250304088795 0.878476920833834 0.25510365 0.43971124 prediction 0.722453233490079 Functional Gain - TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220412519 chr2:220412520 synonymous SNV . 0 22 hPsi_associated_SNPs_20270 0 0 0 0 0 chromatin 0.438726751233528 0.438794764830729 0 0 hPsi_site_13994 iPseU_CNN:0;iRNA_PseU:0 Heel bone mineral density 13995 chr1 233802610 233802610 1 + G A SKCM 233802609 + 233802589 233802629 41 GTCTTCTCAGTCCTGGAGGATGACTGGAACTTCCTGGAATC GTCTTCTCAGTCCTGGAGGATAACTGGAACTTCCTGGAATC < 41bp 0.508294654781712 0.869513851972518 0.20363191 0.3278646 prediction 0.722438394381612 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802609 chr1:233802610 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_20271 0 0 1 0 0 Endoplasmic reticulum 0.438718592995102 0.438718593007336 0 0 hPsi_site_13995 iPseU_CNN:0;iRNA_PseU:0 13996 chr6 26091134 26091134 1 + G A SKCM 26091133 + 26091113 26091153 41 GACCTTGGTCTTTCCTTGTTTGAAGCTTTGGGCTACGTGGA GACCTTGGTCTTTCCTTGTTTAAAGCTTTGGGCTACGTGGA < 41bp 0.516423178318516 0.877637761968631 0.25933194 0.7405043 prediction 0.722429167300231 Functional Gain - HFE ENSG00000010704 CDS Human protein_coding chr6:26091133 chr6:26091134 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_20272 0 0 0 0 1 Endoplasmic reticulum 0.438718537982821 0.43871860602256 0.4810086 0 hPsi_site_13996 iPseU_CNN:0.4810086;iRNA_PseU:0 13997 chr15 22383127 22383127 1 + G A MESO 22383126 + 22383106 22383146 41 CTGGGGCTTCTGGCTTCCTATGCAGTCATCCTCTGCCATGT CTGGGGCTTCTGGCTTCCTATACAGTCATCCTCTGCCATGT < 41bp 0.484099185262196 0.861199839012472 0.33442804 0.4264264 prediction 0.722399678024945 Functional Gain - OR4N4 ENSG00000183706 CDS Human protein_coding chr15:22383126 chr15:22383127 nonsynonymous SNV 0.477 0 22 hPsi_associated_SNPs_20273 0 0 0 0 0 unknown 0.438718592995101 0.438718593019907 0 0 hPsi_site_13997 iPseU_CNN:0;iRNA_PseU:0 13998 chr1 147380361 147380361 1 + G A LUSC 147380360 + 147380340 147380380 41 CACCCCGTCCCTGATGTACGTGGGGCACGCGGTGCACTACG CACCCCGTCCCTGATGTACGTAGGGCACGCGGTGCACTACG < 41bp 0.480238467415721 0.861197679229771 0.22702643 0.4830481 prediction 0.722395358459542 Functional Gain - GJA8 ENSG00000121634 CDS Human protein_coding chr1:147380360 chr1:147380361 synonymous SNV . 0 22 hPsi_associated_SNPs_20274 0 0 0 0 0 unknown 4.45340097347502e-06 0.438718593230809 0 0 hPsi_site_13998 iPseU_CNN:0;iRNA_PseU:0 13999 chr16 29706251 29706251 1 + G A HNSC 29706250 + 29706230 29706270 41 GTGGCCGAGGTCCGGGGCCCTGCCCACTGCCTGCTGCTGGG GTGGCCGAGGTCCGGGGCCCTACCCACTGCCTGCTGCTGGG < 41bp 0.510782366643569 0.871978035266043 0.18371871 0.30238393 prediction 0.722391337244947 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29706250 chr16:29706251 nonsynonymous SNV 0.640 1 22 hPsi_associated_SNPs_20275 0 0 1 0 0 Endoplasmic reticulum 0.438718595764286 0.438722774978064 0 0 hPsi_site_13999 iPseU_CNN:0;iRNA_PseU:0 14000 chr19 47422608 47422608 1 + G A KIRC 47422607 + 47422587 47422627 41 AGCAAAAAGAACCTCCAGGTTGTGGAGACCTCAGCGAGATC AGCAAAAAGAACCTCCAGGTTATGGAGACCTCAGCGAGATC < 41bp 0.504369641197219 0.865563970717728 0.5831598 0.7273438 prediction 0.722388659041018 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422607 chr19:47422608 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20276 0 0 1 0 0 Ribosome 0.438693424193467 0.438718311236808 0.288368 0 hPsi_site_14000 iPseU_CNN:0.288368;iRNA_PseU:0 14001 chr11 60696124 60696124 1 + G A SKCM 60696123 + 60696103 60696143 41 ATCCCTGGGCGCCTGCGTGGTGGAGCTGGAGCTTCCCTCGC ATCCCTGGGCGCCTGCGTGGTAGAGCTGGAGCTTCCCTCGC < 41bp 0.467348297018117 0.861193177398495 0.34176284 0.8208997 prediction 0.72238635479699 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696123 chr11:60696124 synonymous SNV . 0 22 hPsi_associated_SNPs_20277 0 0 0 0 1 Ribosome 0.438718593042447 0.438718409197525 0.6417994 0 hPsi_site_14001 iPseU_CNN:0.6417994;iRNA_PseU:0 14002 chr3 45942873 45942873 1 + G A STAD 45942872 + 45942852 45942892 41 AGGAATCCGGCATTGCTATCTGCACCATGGTTTACCCTAGC AGGAATCCGGCATTGCTATCTACACCATGGTTTACCCTAGC < 41bp 0.476728035051291 0.861190873444844 0.22020143 0.32982713 prediction 0.722381746889688 Functional Gain - CCR9 ENSG00000173585 CDS Human protein_coding chr3:45942872 chr3:45942873 nonsynonymous SNV 0.619 4 22 hPsi_associated_SNPs_20278 0 0 0 0 0 exosome 0.438729817531664 0.438718538315021 0 0 hPsi_site_14002 iPseU_CNN:0;iRNA_PseU:0 14003 chr12 132426095 132426095 1 + G A UCEC 132426094 + 132426074 132426114 41 GCTACATCCTGGAGATGTACTGCGAGGAACCCTTTGTGCGG GCTACATCCTGGAGATGTACTACGAGGAACCCTTTGTGCGG < 41bp 0.479640214741661 0.861185807219106 0.27016884 0.5856321 prediction 0.722371614438212 Functional Gain - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132426094 chr12:132426095 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20279 0 0 1 0 0 Cytosol 0.438718591649436 0.438718787991678 0.1712642 0 hPsi_site_14003 iPseU_CNN:0.1712642;iRNA_PseU:0 14004 chr11 6412670 6412670 1 + G A HNSC 6412669 + 6412649 6412689 41 CATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCG CATCAAGCTGTGCAATCTGCTAAAGATAGCACCACCTGCCG < 41bp 0.477829458605376 0.861169098737337 0.2877738 0.53651834 prediction 0.722338197474675 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6412669 chr11:6412670 synonymous SNV . 0 22 hPsi_associated_SNPs_20280 0 0 0 1 3 Endoplasmic reticulum 0.438455357701656 0.438718862988862 0.07303668 0 hPsi_site_14004 iPseU_CNN:0.07303668;iRNA_PseU:0 14005 chr1 161642828 161642828 1 + G A LUAD 161642827 + 161642807 161642847 41 GAGAAACCATCGTGCTGAGGTGCCACAGCTGGAAGGACAAG GAGAAACCATCGTGCTGAGGTACCACAGCTGGAAGGACAAG < 41bp 0.527444359452801 0.888609263836117 0.30340967 0.56764877 prediction 0.722329808766632 Functional Gain - FCGR2B ENSG00000072694 CDS Human protein_coding chr1:161642827 chr1:161642828 nonsynonymous SNV 0.984 5 22 hPsi_associated_SNPs_20281 0 0 0 0 0 Endoplasmic reticulum 0.438716996212296 0.438717123808385 0.13529754 0 hPsi_site_14005 iPseU_CNN:0.13529754;iRNA_PseU:0 14006 chr10 46999883 46999883 1 + G A SKCM 46999882 + 46999862 46999902 41 TCCCCGCTGTCAGCCCAGGATGCTGGTGTGCAGGCGGCCCC TCCCCGCTGTCAGCCCAGGATACTGGTGTGCAGGCGGCCCC < 41bp 0.514320549953341 0.875470906688188 0.28204507 0.48191226 prediction 0.722300713469696 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:46999882 chr10:46999883 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_20282 0 0 0 0 0 exosome 0.438727686679966 0.438838359927838 0 0 hPsi_site_14006 iPseU_CNN:0;iRNA_PseU:0 14007 chr17 26495622 26495622 1 + G A COAD 26495621 + 26495601 26495641 41 TTGACATCTGGTCTGTGGGATGTATCTTTGCAGAACTACTA TTGACATCTGGTCTGTGGGATATATCTTTGCAGAACTACTA < 41bp 0.51278108567035 0.873925827288839 0.2496508 0.2918015 prediction 0.722289483236977 Functional Gain - NLK ENSG00000087095 CDS Human protein_coding chr17:26495621 chr17:26495622 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20283 0 0 1 2 1 Ribosome 0.438713919717683 0.438718800010124 0 0 hPsi_site_14007 iPseU_CNN:0;iRNA_PseU:0 Post bronchodilator FEV1/FVC ratio 14008 chr1 6642229 6642229 1 + G A BLCA 6642228 + 6642208 6642248 41 ATCCGAAAGCCCTGTGCAGCTGAGCCAGCCCTGAGCGCGGG ATCCGAAAGCCCTGTGCAGCTAAGCCAGCCCTGAGCGCGGG < 41bp 0.494877504643558 0.861137049876749 0.17091313 0.34251755 prediction 0.722274099753497 Functional Gain - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6642228 chr1:6642229 nonsynonymous SNV 0.694 0 22 hPsi_associated_SNPs_20284 0 0 1 0 0 Nucleus 0.438718735594511 0.438716816385617 0 0 hPsi_site_14008 iPseU_CNN:0;iRNA_PseU:0 14009 chr6 167550515 167550515 1 + G A LIHC 167550514 + 167550494 167550534 41 TGGTGCTTGTGTTTCTGGCTTGTCAGATTCCTCATAACATG TGGTGCTTGTGTTTCTGGCTTATCAGATTCCTCATAACATG < 41bp 0.483005083527613 0.861131476630199 0.25252378 0.31765503 prediction 0.722262953260398 Functional Gain - CCR6 ENSG00000112486 CDS Human protein_coding chr6:167550514 chr6:167550515 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_20285 0 0 1 0 0 exosome 0.438717158818941 0.43876610281421 0 0 hPsi_site_14009 iPseU_CNN:0;iRNA_PseU:0 Alzheimer's disease 14010 chr3 42568930 42568930 1 + G A rs559421642 42568929 + 42568909 42568949 41 GTGAAGACCGGCTACACCATTGGCTACGGCCTGTCCCTCGC GTGAAGACCGGCTACACCATTAGCTACGGCCTGTCCCTCGC < 41bp 0.517762268271714 0.87888728420848 0.32957602 0.36343116 prediction 0.722250031873532 Functional Gain - VIPR1 ENSG00000114812 CDS Human protein_coding chr3:42568929 chr3:42568930 nonsynonymous SNV 0.295 5 22 hPsi_associated_SNPs_20286 0 0 0 0 3 exosome 0.440274106721153 0.438718588723222 0 0 hPsi_site_14010 iPseU_CNN:0;iRNA_PseU:0 14011 chr16 1035195 1035195 1 + G A BLCA 1035194 + 1035174 1035214 41 GCCGGCTCACAGGGCGACTATGGCGACCTGCAGGCCTCCAG GCCGGCTCACAGGGCGACTATAGCGACCTGCAGGCCTCCAG < 41bp 0.489233414792044 0.861119152213078 0.20557249 0.28659457 prediction 0.722238304426156 Functional Gain - SOX8 ENSG00000005513 CDS Human protein_coding chr16:1035194 chr16:1035195 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20287 0 0 0 0 0 exosome 0.438709060005889 0.438719458424052 0 0 hPsi_site_14011 iPseU_CNN:0;iRNA_PseU:0 14012 chr6 43098368 43098368 1 + G A ESCA 43098367 + 43098347 43098387 41 CCGAGCCTGCAGTGGCTCTTTGAGGATGAGACTCCCATCAC CCGAGCCTGCAGTGGCTCTTTAAGGATGAGACTCCCATCAC < 41bp 0.468996557596696 0.861085525697843 0.3227019 0.64258814 prediction 0.722171051395686 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43098367 chr6:43098368 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20288 0 0 1 0 1 Endoplasmic reticulum 0.438702940795146 0.438720843242155 0.28517628 0 hPsi_site_14012 iPseU_CNN:0.28517628;iRNA_PseU:0 14013 chr10 101295065 101295065 1 + G A LUSC 101295064 + 101295044 101295084 41 CCGCCGCCGCGCCGCGTGGCTGTCCCGGTGCTGGTGCGGGA CCGCCGCCGCGCCGCGTGGCTATCCCGGTGCTGGTGCGGGA < 41bp 0.504605996866611 0.865674697977513 0.27165428 0.8980746 prediction 0.722137402221804 Functional Gain - NKX2-3 ENSG00000119919 CDS Human protein_coding chr10:101295064 chr10:101295065 nonsynonymous SNV 0.778 2 22 hPsi_associated_SNPs_20289 0 0 0 0 0 exosome 0.438386672924129 0.438718115628509 0.7961492 0 hPsi_site_14013 iPseU_CNN:0.7961492;iRNA_PseU:0 14014 chr20 2635209 2635209 1 + G A LUSC 2635208 + 2635188 2635228 41 CAGACTGGAGGAGTCATAGCTGAGATCCTGCGAGGTGAGAC CAGACTGGAGGAGTCATAGCTAAGATCCTGCGAGGTGAGAC < 41bp 0.484925150478592 0.861061977418722 0.37504873 0.7032474 prediction 0.722123954837443 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635208 chr20:2635209 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20290 0 0 1 0 1 Cytosol 0.438448605819901 0.438722263165545 0.4064948 0 hPsi_site_14014 iPseU_CNN:0.4064948;iRNA_PseU:0 14015 chr2 71591242 71591242 1 + G A rs201804304 71591241 + 71591221 71591261 41 GAAGTCGAAGTCCAAGAATTTGCCATCGTTTCATTTCTAGA GAAGTCGAAGTCCAAGAATTTACCATCGTTTCATTTCTAGA < 41bp 0.492656769455158 0.861059806918239 0.19506308 0.3822416 prediction 0.722119613836478 Functional Gain - ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71591241 chr2:71591242 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20291 0 0 1 0 0 Nucleus 0.437953681426758 0.438726130072954 0 0 hPsi_site_14015 iPseU_CNN:0;iRNA_PseU:0 14016 chr1 40432812 40432812 1 + G A OV 40432811 + 40432791 40432831 41 TACACCTTGGGCTTCCGCAATGAATTCCAGAATCTACTCCT TACACCTTGGGCTTCCGCAATAAATTCCAGAATCTACTCCT < 41bp 0.474927308808039 0.861055255554598 0.2983399 0.38582125 prediction 0.722110511109195 Functional Gain - MFSD2A ENSG00000168389 CDS Human protein_coding chr1:40432811 chr1:40432812 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_20292 0 0 0 0 2 Ribosome 0.438718612469608 0.438718592997404 0 0 hPsi_site_14016 iPseU_CNN:0;iRNA_PseU:0 14017 chr1 156554998 156554998 1 + G A BLCA 156554997 + 156554977 156555017 41 GAGGTCGGCAAACGTTCCGGTGAGGGCTGGGCCGGGAAGAC GAGGTCGGCAAACGTTCCGGTAAGGGCTGGGCCGGGAAGAC < 41bp 0.519678776382614 0.88070426436305 0.26877847 0.7745538 prediction 0.722050975960874 Functional Gain - TTC24 ENSG00000187862 CDS Human protein_coding chr1:156554997 chr1:156554998 synonymous SNV . 0 22 hPsi_associated_SNPs_20293 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0.5491076 0 hPsi_site_14017 iPseU_CNN:0.5491076;iRNA_PseU:0 14018 chr22 31829903 31829903 1 + G A SKCM 31829902 + 31829882 31829922 41 GAAACACAATCCTCAGAAAGTGGGTAAAGACCATACGTTGG GAAACACAATCCTCAGAAAGTAGGTAAAGACCATACGTTGG < 41bp 0.506438035814648 0.867458926210793 0.29659426 0.37311178 prediction 0.72204178079229 Functional Gain - DRG1 ENSG00000185721 CDS Human protein_coding chr22:31829902 chr22:31829903 synonymous SNV . 0 22 hPsi_associated_SNPs_20294 0 0 1 0 1 Ribosome 0.438718593807495 0.43871858581537 0 0 hPsi_site_14018 iPseU_CNN:0;iRNA_PseU:0 14019 chr11 6629388 6629388 1 + G A STAD 6629387 + 6629367 6629407 41 AATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGC AATGTAATGAACCGTGGGGATAACACCCCCCTGCATCTGGC < 41bp 0.516983593192723 0.878000116400365 0.2166585 0.41382742 prediction 0.722033046415285 Functional Gain - ILK ENSG00000166333 CDS Human protein_coding chr11:6629387 chr11:6629388 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20295 0 0 1 0 1 Endoplasmic reticulum 0.438717914402477 0.438711325440513 0 0 hPsi_site_14019 iPseU_CNN:0;iRNA_PseU:0 14020 chr10 103827149 103827149 1 + G A UCEC 103827148 + 103827128 103827168 41 CCTAAAGCTGTGCTCCAAGCTGTCGGGCAGCTGGTGCAAAA CCTAAAGCTGTGCTCCAAGCTATCGGGCAGCTGGTGCAAAA < 41bp 0.499236986368249 0.861015603964292 0.379994 0.70924836 prediction 0.722031207928584 Functional Gain - HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827148 chr10:103827149 nonsynonymous SNV 0.264 0 22 hPsi_associated_SNPs_20296 0 0 1 0 0 Ribosome 0.43871976879843 0.438725051037323 0.41849672 0 hPsi_site_14020 iPseU_CNN:0.41849672;iRNA_PseU:0 14021 chrX 149013299 149013299 1 + G A CESC 149013298 + 149013278 149013318 41 ACTCTGTGGAGCCAATCCGATGAGGGTTCCAGCAGCAATGA ACTCTGTGGAGCCAATCCGATAAGGGTTCCAGCAGCAATGA < 41bp 0.484903619644099 0.861014402998868 0.3355043 0.84747076 prediction 0.722028805997736 Functional Gain - MAGEA8 ENSG00000156009 CDS Human protein_coding chrX:149013298 chrX:149013299 nonsynonymous SNV 0.004 3 22 hPsi_associated_SNPs_20297 0 0 0 0 0 exosome 0.438702421019544 0.435220079026965 0.69494152 0 hPsi_site_14021 iPseU_CNN:0.69494152;iRNA_PseU:0 14022 chr19 50168920 50168920 1 + G A rs139412285 50168919 + 50168899 50168939 41 GGTCGGGGCGTGCGGGCAGCTGGAACCCACCCCTGTCTTGG GGTCGGGGCGTGCGGGCAGCTAGAACCCACCCCTGTCTTGG < 41bp 0.502062536313833 0.8630700528871 0.17319468 0.4183604 prediction 0.722015033146535 Functional Gain - BCL2L12;IRF3 ENSG00000126453;ENSG00000126456 UTR5 Human other chr19:50168919 chr19:50168920 . . 0 22 hPsi_associated_SNPs_20298 0 0 0 0 0 unknown 0.438699900209169 0.438718593991181 0 0 hPsi_site_14022 iPseU_CNN:0;iRNA_PseU:0 14023 chr8 86388063 86388063 1 + G A UCEC 86388062 + 86388042 86388082 41 CCGGGCCTTCAGAAAGTTGTTGATGTGCTGGATTCCATTAA CCGGGCCTTCAGAAAGTTGTTAATGTGCTGGATTCCATTAA < 41bp 0.476082413741253 0.860995708755512 0.2261712 0.3325526 prediction 0.721991417511024 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86388062 chr8:86388063 nonsynonymous SNV 0.982 2 22 hPsi_associated_SNPs_20299 0 0 1 0 2 Ribosome 0.438718555422665 0.438718568269386 0 0 hPsi_site_14023 iPseU_CNN:0;iRNA_PseU:0 14024 chr2 113831960 113831960 1 + G A SKCM 113831959 + 113831939 113831979 41 AAGAGATGGCCAGCTGCTGGTGGGAGATCCTGTTGCAGACA AAGAGATGGCCAGCTGCTGGTAGGAGATCCTGTTGCAGACA < 41bp 0.471415566386521 0.860988381949189 0.15845862 0.49984494 prediction 0.721976763898378 Functional Gain - IL1F10 ENSG00000136697 CDS Human protein_coding chr2:113831959 chr2:113831960 synonymous SNV . 0 22 hPsi_associated_SNPs_20300 0 0 0 0 2 unknown 0.438738086151892 0.437716835664104 0 0 hPsi_site_14024 iPseU_CNN:0;iRNA_PseU:0 14025 chr16 31383771 31383771 1 + G A UCEC 31383770 + 31383750 31383790 41 CTGGTGGGCAAGCCCCTCCTTGCCTTCAGAAACCTGCGGCC CTGGTGGGCAAGCCCCTCCTTACCTTCAGAAACCTGCGGCC < 41bp 0.458039176770158 0.860978063187589 0.30209947 0.42149404 prediction 0.721956126375177 Functional Gain - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31383770 chr16:31383771 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_20301 0 0 0 0 2 Nucleus 0.438718592995397 0.438718592984586 0 0 hPsi_site_14025 iPseU_CNN:0;iRNA_PseU:0 14026 chr21 36081723 36081723 1 + G A SKCM 36081722 + 36081702 36081742 41 TTAAATAGCCCTCTGCCTGATGAAATAGATGCCTACAGCAC TTAAATAGCCCTCTGCCTGATAAAATAGATGCCTACAGCAC < 41bp 0.469295150224704 0.860977725697817 0.34840208 0.38544586 prediction 0.721955451395634 Functional Gain - CLIC6 ENSG00000159212 CDS Human protein_coding chr21:36081722 chr21:36081723 nonsynonymous SNV 0.968 5 22 hPsi_associated_SNPs_20302 0 0 0 0 1 exosome 0.438718701581279 0.438718585651394 0 0 hPsi_site_14026 iPseU_CNN:0;iRNA_PseU:0 14027 chr19 6187323 6187323 1 + G A UCEC 6187322 + 6187302 6187342 41 ATCACTGCTGGTGGTGAAAATGTGCCCCCCATTCCTGTTGA ATCACTGCTGGTGGTGAAAATATGCCCCCCATTCCTGTTGA < 41bp 0.518993037990396 0.879961762165441 0.27205068 0.36848038 prediction 0.721937448350089 Functional Gain - ACSBG2 ENSG00000130377 CDS Human protein_coding chr19:6187322 chr19:6187323 nonsynonymous SNV 0.005 2 22 hPsi_associated_SNPs_20303 0 0 0 0 1 exosome 0.438718595219198 0.438718600282598 0 0 hPsi_site_14027 iPseU_CNN:0;iRNA_PseU:0 14028 chr14 24572745 24572745 1 + G A UCEC 24572744 + 24572724 24572764 41 ATCATCATGCACGACCCATTTGCCATGCGGCCCTTTTTTGG ATCATCATGCACGACCCATTTACCATGCGGCCCTTTTTTGG < 41bp 0.516502436221342 0.877469450564489 0.27972826 0.56077975 prediction 0.721934028686295 Functional Gain - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24572744 chr14:24572745 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20304 0 0 0 0 1 Endoplasmic reticulum 0.438718180110216 0.438480412673032 0.1215595 0 hPsi_site_14028 iPseU_CNN:0.1215595;iRNA_PseU:0 14029 chr2 74742912 74742912 1 + G A COAD 74742911 + 74742891 74742931 41 CGCCAGAAGTACCTGGCCTCTGCGGAGAGGGCGGCGCTGGC CGCCAGAAGTACCTGGCCTCTACGGAGAGGGCGGCGCTGGC < 41bp 0.473502497148266 0.860962978746548 0.2581936 0.3542151 prediction 0.721925957493097 Functional Gain - TLX2 ENSG00000115297 CDS Human protein_coding chr2:74742911 chr2:74742912 nonsynonymous SNV 0.604 2 22 hPsi_associated_SNPs_20305 0 0 0 0 1 exosome 0.438729557331351 0.438727200611806 0 0 hPsi_site_14029 iPseU_CNN:0;iRNA_PseU:0 14030 chr17 47296962 47296962 1 + G A COAD 47296961 + 47296941 47296981 41 CGAAAGAGCATCAAGGCCCCTGCCACACCCGCCTCCGCCAC CGAAAGAGCATCAAGGCCCCTACCACACCCGCCTCCGCCAC < 41bp 0.523150105141757 0.884107333088871 0.42924 0.7326436 prediction 0.721914455894229 Functional Gain - ABI3 ENSG00000108798 CDS Human protein_coding chr17:47296961 chr17:47296962 nonsynonymous SNV 0.709 0 22 hPsi_associated_SNPs_20306 0 0 0 0 2 exosome 0.438718555126782 0.438718580631673 0.4652872 0 hPsi_site_14030 iPseU_CNN:0.4652872;iRNA_PseU:0 14031 chr1 43317170 43317170 1 + G A STAD 43317169 + 43317149 43317189 41 GGCAAGAGCTTCAGCCAGAGTGCCACGCTAGCTGTGCATCA GGCAAGAGCTTCAGCCAGAGTACCACGCTAGCTGTGCATCA < 41bp 0.517212075866646 0.87815721949079 0.23886049 0.48219073 prediction 0.721890287248289 Functional Gain - ZNF691 ENSG00000164011 CDS Human protein_coding chr1:43317169 chr1:43317170 nonsynonymous SNV 0.581 0 22 hPsi_associated_SNPs_20307 0 0 0 0 0 Cytosol 0.443004111147558 0.438404248132469 0 0 hPsi_site_14031 iPseU_CNN:0;iRNA_PseU:0 14032 chr1 110465856 110465856 1 + G A UCEC 110465855 + 110465835 110465875 41 CCTAGCAGTGACCCGGCCTCTGTCTCCCCTCATCAGCCCCT CCTAGCAGTGACCCGGCCTCTATCTCCCCTCATCAGCCCCT < 41bp 0.519148250145222 0.880093199522806 0.29936972 0.4366643 prediction 0.721889898755169 Functional Gain - CSF1 ENSG00000184371 CDS Human protein_coding chr1:110465855 chr1:110465856 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_20308 0 0 0 0 1 chromatin 0.438718591101174 0.438718581227191 0 0 hPsi_site_14032 iPseU_CNN:0;iRNA_PseU:0 14033 chr19 13873232 13873232 1 + G A BLCA 13873231 + 13873211 13873251 41 CCGCAAGCTGGCGGCTCTGCTGAAGTTCCACACCCTGGACT CCGCAAGCTGGCGGCTCTGCTAAAGTTCCACACCCTGGACT < 41bp 0.481317276597841 0.860941624072665 0.3500267 0.7732837 prediction 0.721883248145329 Functional Gain - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13873231 chr19:13873232 synonymous SNV . 0 22 hPsi_associated_SNPs_20309 0 0 1 0 1 Cytosol 0.438718773459456 0.438717560582868 0.5465674 0 hPsi_site_14033 iPseU_CNN:0.5465674;iRNA_PseU:0 14034 chr12 133153435 133153435 1 + G A UCEC 133153434 + 133153414 133153454 41 GGTGGGTGCAAAGCTGGACCTGTTCGGCAGACCCCCTGCCC GGTGGGTGCAAAGCTGGACCTATTCGGCAGACCCCCTGCCC < 41bp 0.475173303269003 0.860912548828069 0.46579748 0.8145767 prediction 0.721825097656137 Functional Gain - FBRSL1 ENSG00000112787 CDS Human protein_coding chr12:133153434 chr12:133153435 synonymous SNV . 0 22 hPsi_associated_SNPs_20310 0 0 1 0 2 chromatin 0.438649665501497 0.438702994981577 0.6291534 0 hPsi_site_14034 iPseU_CNN:0.6291534;iRNA_PseU:0 14035 chr8 145694736 145694736 1 + G A UCEC 145694735 + 145694715 145694755 41 AGCAAGGGCCCCCAGCCGGATGCCCAGGGCGGCTGCCAGAA AGCAAGGGCCCCCAGCCGGATACCCAGGGCGGCTGCCAGAA < 41bp 0.476365142143692 0.860891009998851 0.2063874 0.44773868 prediction 0.721782019997702 Functional Gain - KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145694735 chr8:145694736 nonsynonymous SNV 0.877 0 22 hPsi_associated_SNPs_20311 0 0 1 0 1 nucleolus 0.438793961680422 0.438722971758023 0 0 hPsi_site_14035 iPseU_CNN:0;iRNA_PseU:0 14036 chr3 49736441 49736441 1 + G A LUAD 49736440 + 49736420 49736460 41 GTATCACTGGGCACTGCCTTTGAGAACCTGTCCAGGGGCCT GTATCACTGGGCACTGCCTTTAAGAACCTGTCCAGGGGCCT < 41bp 0.521671031556518 0.88255209061359 0.22416326 0.3361987 prediction 0.721762118114144 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736440 chr3:49736441 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_20312 0 0 1 0 1 Nucleus 0.438720217155088 0.438718586835126 0 0 hPsi_site_14036 iPseU_CNN:0;iRNA_PseU:0 14037 chr6 137147485 137147485 1 + G A THCA 137147484 + 137147464 137147504 41 TGGAATGATGGTTTGTTTGATGTGACTTGGAGTGAGAACAA TGGAATGATGGTTTGTTTGATATGACTTGGAGTGAGAACAA < 41bp 0.490286682897775 0.860869890425338 0.28921932 0.36865902 prediction 0.721739780850675 Functional Gain - PEX7 ENSG00000112357 CDS Human protein_coding chr6:137147484 chr6:137147485 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20313 0 0 1 1 1 Ribosome 0.438726033364783 0.438725242747981 0 0 hPsi_site_14037 iPseU_CNN:0;iRNA_PseU:0 14038 chr16 29809773 29809773 1 + G A UCEC 29809772 + 29809752 29809792 41 GCAGCCCATCCTAAGGCACTTGCTGGAAGGGCAGAATGCCA GCAGCCCATCCTAAGGCACTTACTGGAAGGGCAGAATGCCA < 41bp 0.524349409489741 0.885192159650985 0.19674864 0.38937417 prediction 0.721685500322488 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29809772 chr16:29809773 synonymous SNV . 0 22 hPsi_associated_SNPs_20314 0 0 1 0 2 Cytosol 0.438718564751218 0.438718324567882 0 0 hPsi_site_14038 iPseU_CNN:0;iRNA_PseU:0 14039 chr22 46752850 46752850 1 + G A HNSC 46752849 + 46752829 46752869 41 CGCAGAGCTGGGATGGCCACTGAGAGCCCCAGTGACAGCCC CGCAGAGCTGGGATGGCCACTAAGAGCCCCAGTGACAGCCC < 41bp 0.50663823607959 0.867477726240438 0.1875222 0.22634879 prediction 0.721678980321694 Functional Gain - TRMU ENSG00000100416 CDS Human protein_coding chr22:46752849 chr22:46752850 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20315 0 0 1 0 0 Ribosome 0.438720155594428 0.438868100032105 0 0 hPsi_site_14039 iPseU_CNN:0;iRNA_PseU:0 14040 chr19 9296665 9296665 1 + G A UCEC 9296664 + 9296644 9296684 41 CTCTCCAACCTGTCCTGGGTTGACATCTGTTTCAGCACTTG CTCTCCAACCTGTCCTGGGTTAACATCTGTTTCAGCACTTG < 41bp 0.500469044627197 0.861302603167259 0.31419367 0.524163 prediction 0.721667117080125 Functional Gain - OR7D2 ENSG00000188000 CDS Human protein_coding chr19:9296664 chr19:9296665 nonsynonymous SNV 0.033 3 22 hPsi_associated_SNPs_20316 0 0 0 0 0 Nucleus 0.438718600553346 0.438683842086539 0.0483260000000001 0 hPsi_site_14040 iPseU_CNN:0.0483260000000001;iRNA_PseU:0 14041 chr10 47087590 47087590 1 + G A SKCM 47087589 + 47087569 47087609 41 GGTCAATGTGGTGCTGGTGGTGATGGTGGTGGCCTTTGCTG GGTCAATGTGGTGCTGGTGGTAATGGTGGTGGCCTTTGCTG < 41bp 0.476480933293461 0.860831938744133 0.37675616 0.7538362 prediction 0.721663877488266 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087589 chr10:47087590 synonymous SNV . 0 22 hPsi_associated_SNPs_20317 0 0 0 0 0 unknown 0.438716724364407 0.438714932201586 0.5076724 0 hPsi_site_14041 iPseU_CNN:0.5076724;iRNA_PseU:0 14042 chr1 227954745 227954745 1 + G A UCEC 227954744 + 227954724 227954764 41 ACTGCACCTGCAGACAAGCCTGCCAGCCCTTTCTGAGGCAG ACTGCACCTGCAGACAAGCCTACCAGCCCTTTCTGAGGCAG < 41bp 0.486220265642469 0.860824673938047 0.2889102 0.34716058 prediction 0.721649347876095 Functional Gain - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227954744 chr1:227954745 synonymous SNV . 0 22 hPsi_associated_SNPs_20318 0 0 1 0 2 Ribosome 0.438713169873309 0.438627294927868 0 0 hPsi_site_14042 iPseU_CNN:0;iRNA_PseU:0 14043 chr15 65214128 65214128 1 + G A SKCM 65214127 + 65214107 65214147 41 TCCTCTCCCCTAGTTTGGGATGAATGCGCTTCTCCTGTCTG TCCTCTCCCCTAGTTTGGGATAAATGCGCTTCTCCTGTCTG < 41bp 0.488972854514086 0.860810605333247 0.45248383 0.6266011 prediction 0.721621210666495 Functional Gain - ANKDD1A ENSG00000166839;ENSG00000249240 CDS Human other chr15:65214127 chr15:65214128 nonsynonymous SNV 0.967 3 22 hPsi_associated_SNPs_20319 0 0 0 0 1 nucleoplasm 0.438710848632857 0.438718592994691 0.2532022 0 hPsi_site_14043 iPseU_CNN:0.2532022;iRNA_PseU:0 14044 chr2 95944800 95944800 1 + G A SKCM 95944799 + 95944779 95944819 41 GGCTGAAGGGTTCCCGGGCTTGGAGGCAGCTTCCCGCTGGG GGCTGAAGGGTTCCCGGGCTTAGAGGCAGCTTCCCGCTGGG < 41bp 0.522872360825884 0.883679870633986 0.3056063 0.6417764 prediction 0.721615019616206 Functional Gain - PROM2 ENSG00000155066 CDS Human protein_coding chr2:95944799 chr2:95944800 synonymous SNV . 0 22 hPsi_associated_SNPs_20320 0 0 0 0 2 Ribosome 0.438718592995102 0.438718592995102 0.2835528 0 hPsi_site_14044 iPseU_CNN:0.2835528;iRNA_PseU:0 14045 chr15 45007692 45007692 1 + G A UCEC 45007691 + 45007671 45007711 41 TCAAATTTCCTGAATTGCTATGTGTCTGGGTTTCATCCATC TCAAATTTCCTGAATTGCTATATGTCTGGGTTTCATCCATC < 41bp 0.504907616896355 0.865714743105638 0.28031862 0.38644668 prediction 0.721614252418565 Functional Gain - B2M ENSG00000166710 CDS Human protein_coding chr15:45007691 chr15:45007692 nonsynonymous SNV 0.767 4 22 hPsi_associated_SNPs_20321 0 0 1 0 2 Ribosome 0.438706438737243 0.438717910541095 0 0 hPsi_site_14045 iPseU_CNN:0;iRNA_PseU:0 14046 chrX 79286075 79286075 1 + G A UCEC 79286074 + 79286054 79286094 41 ACTCCTTACTTTCTCCACTTTGCTTTTCACCTATGTTTCAT ACTCCTTACTTTCTCCACTTTACTTTTCACCTATGTTTCAT < 41bp 0.485535802228343 0.860801379098449 0.30606112 0.6310057 prediction 0.721602758196898 Functional Gain - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79286074 chrX:79286075 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_20322 0 0 0 0 1 unknown 0.438735670817097 0.438718614835158 0.2620114 0 hPsi_site_14046 iPseU_CNN:0.2620114;iRNA_PseU:0 14047 chr9 91963047 91963047 1 + G A BLCA 91963046 + 91963026 91963066 41 GCGTCTCCAAGAAAATGCTGTGAGTCCAGCTTTTACCAGTG GCGTCTCCAAGAAAATGCTGTAAGTCCAGCTTTTACCAGTG < 41bp 0.467867976858055 0.860791914802564 0.23815343 0.48980016 prediction 0.721583829605128 Functional Gain - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91963046 chr9:91963047 synonymous SNV . 0 22 hPsi_associated_SNPs_20323 0 0 1 0 2 Cytosol 0.438720423583787 0.438718587868564 0 0 hPsi_site_14047 iPseU_CNN:0;iRNA_PseU:0 14048 chr12 56109922 56109922 1 + G A UCS 56109921 + 56109901 56109941 41 CCCCCAGCCCGACGTGACCATGCTGTCCCGCCTCCTAAAAG CCCCCAGCCCGACGTGACCATACTGTCCCGCCTCCTAAAAG < 41bp 0.486618595714371 0.860789240107143 0.40835083 0.8788004 prediction 0.721578480214286 Functional Gain - BLOC1S1 ENSG00000135441;ENSG00000258311 CDS Human other chr12:56109921 chr12:56109922 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_20324 0 0 1 0 0 Ribosome 0.438699901814228 0.438735052763632 0.7576008 0 hPsi_site_14048 iPseU_CNN:0.7576008;iRNA_PseU:0 14049 chr8 143559664 143559664 1 + G A LUSC 143559663 + 143559643 143559683 41 AACGGGCCTTCCTACGGGGGTGCGGAGTGCCAGGGCCACTG AACGGGCCTTCCTACGGGGGTACGGAGTGCCAGGGCCACTG < 41bp 0.516056743722881 0.876837199448532 0.31832072 0.4650186 prediction 0.721560911451301 Functional Gain - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143559663 chr8:143559664 nonsynonymous SNV 0.602 1 22 hPsi_associated_SNPs_20325 0 0 0 0 1 Nucleus 0.438718592995102 0.438718592995102 0 0 hPsi_site_14049 iPseU_CNN:0;iRNA_PseU:0 14050 chr12 16189258 16189258 1 + G A BLCA 16189257 + 16189237 16189277 41 GGAGCTTGGAGATGAGTGGCTGAAGCCAGAACTCTTTCGAA GGAGCTTGGAGATGAGTGGCTAAAGCCAGAACTCTTTCGAA < 41bp 0.481285530826304 0.860774690722204 0.30264574 0.691275 prediction 0.721549381444409 Functional Gain - DERA ENSG00000023697 CDS Human protein_coding chr12:16189257 chr12:16189258 synonymous SNV . 0 22 hPsi_associated_SNPs_20326 0 0 0 0 2 Ribosome 0.43982710063132 0.438718187399465 0.38255 0 hPsi_site_14050 iPseU_CNN:0.38255;iRNA_PseU:0 14051 chr8 104340562 104340562 1 + G A UCEC 104340561 + 104340541 104340581 41 TACCTGATGACATTAATTGTTGGCATCTCTGCTGTCTTCTG TACCTGATGACATTAATTGTTAGCATCTCTGCTGTCTTCTG < 41bp 0.481533799788373 0.860766923237382 0.31947386 0.3817433 prediction 0.721533846474764 Functional Gain - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104340561 chr8:104340562 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20327 0 0 1 0 1 Ribosome 0.438718591072639 0.438427940679522 0 0 hPsi_site_14051 iPseU_CNN:0;iRNA_PseU:0 14052 chr11 30358304 30358304 1 + G A COAD 30358303 + 30358283 30358323 41 CTGTATGAGCAAATTGAAATTGAAGGAGGAGAAATAATTCA CTGTATGAGCAAATTGAAATTAAAGGAGGAGAAATAATTCA < 41bp 0.499630917265476 0.86076475315058 0.3231499 0.5063365 prediction 0.72152950630116 Functional Gain - ARL14EP ENSG00000152219 CDS Human protein_coding chr11:30358303 chr11:30358304 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20328 0 0 1 0 0 chromatin 0.438723597332821 0.438717887210345 0.0126729999999999 0 hPsi_site_14052 iPseU_CNN:0.0126729999999999;iRNA_PseU:0 14053 chr1 159558316 159558316 1 + G A BLCA 159558315 + 159558295 159558335 41 GATTCCTATGGGGGCAAGTTTGATAGGAGCCAGTCCTTTGT GATTCCTATGGGGGCAAGTTTAATAGGAGCCAGTCCTTTGT < 41bp 0.510633655418772 0.871385512871539 0.47829497 0.62433004 prediction 0.721503714905535 Functional Gain - APCS ENSG00000132703 CDS Human protein_coding chr1:159558315 chr1:159558316 nonsynonymous SNV 0.068 1 22 hPsi_associated_SNPs_20329 0 0 0 0 0 Endoplasmic reticulum 0.438718592995672 0.438718592995153 0.24866008 0 hPsi_site_14053 iPseU_CNN:0.24866008;iRNA_PseU:0 14054 chr12 57627074 57627074 1 + G A rs2229717 57627073 + 57627053 57627093 41 CTTTGCCGTGTTCCCATCCCTGCAGGGGGGCCCCCACAATC CTTTGCCGTGTTCCCATCCCTACAGGGGGGCCCCCACAATC < 41bp 0.472887437340592 0.860733796027371 0.23076093 0.3993093 prediction 0.721467592054741 Functional Gain - SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627073 chr12:57627074 synonymous SNV . 0 22 hPsi_associated_SNPs_20330 0 0 1 0 1 Cytosol 0.438718590529327 0.438718592995044 0 0 hPsi_site_14054 iPseU_CNN:0;iRNA_PseU:0 14055 chr17 26671444 26671444 1 + G A HNSC 26671443 + 26671423 26671463 41 ACACTCAACGTCCTACTCTATGAGACTCCCCGCGTCCCCGA ACACTCAACGTCCTACTCTATAAGACTCCCCGCGTCCCCGA < 41bp 0.511246843652377 0.871972048283311 0.46918905 0.77854776 prediction 0.721450409261867 Functional Gain - TNFAIP1 ENSG00000109079 CDS Human protein_coding chr17:26671443 chr17:26671444 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20331 0 0 1 0 1 Ribosome 0.438718490930485 0.43871853995955 0.55709552 0 hPsi_site_14055 iPseU_CNN:0.55709552;iRNA_PseU:0 14056 chr7 154862762 154862762 1 + G A LUAD 154862761 + 154862741 154862781 41 CACCTTGCTGGGCTTTCTGGTGGCGGCGACGTTCGCCTGGA CACCTTGCTGGGCTTTCTGGTAGCGGCGACGTTCGCCTGGA < 41bp 0.474565437200406 0.860723665795846 0.25592476 0.64507926 prediction 0.721447331591692 Functional Gain - HTR5A ENSG00000157219;ENSG00000220575 CDS Human other chr7:154862761 chr7:154862762 synonymous SNV . 0 22 hPsi_associated_SNPs_20332 0 0 0 0 0 exosome 0.434400873692444 0.438718592979161 0.29015852 0 hPsi_site_14056 iPseU_CNN:0.29015852;iRNA_PseU:0 14057 chr19 36033424 36033424 1 + C T UCEC 36033425 - 36033405 36033445 41 ATCCGGTGAGGGCGCGGAGATGACCACACGTTGAGCACCTG ATCCGGTGAGGGCGCGGAGATAACCACACGTTGAGCACCTG < 41bp 0.484549956966439 0.860723359103409 0.24649468 0.38649598 prediction 0.721446718206818 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36033425 chr19:36033424 synonymous SNV . 0 22 hPsi_associated_SNPs_20333 0 0 1 0 0 chromatin 0.433867624412951 0.43871861950309 0 0 hPsi_site_14057 iPseU_CNN:0;iRNA_PseU:0 14058 chr19 55670558 55670558 1 + C T SKCM 55670559 - 55670539 55670579 41 CTGACCCAGCCTCTGCAGGGTGGGACCCCACACTGTGAGCC CTGACCCAGCCTCTGCAGGGTAGGACCCCACACTGTGAGCC < 41bp 0.517206775490095 0.877917593279689 0.26741207 0.6359352 prediction 0.721421635579188 Functional Gain - DNAAF3 ENSG00000167646 CDS Human protein_coding chr19:55670559 chr19:55670558 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20334 0 0 1 0 0 nucleolus 0.438718902459313 0.438718593022941 0.2718704 0 hPsi_site_14058 iPseU_CNN:0.2718704;iRNA_PseU:0 14059 chr7 150746452 150746452 1 + G A UCEC 150746451 + 150746431 150746471 41 TGGGCACTCCCTGGATGACATGCTGCTGGACTGTCGCTTCC TGGGCACTCCCTGGATGACATACTGCTGGACTGTCGCTTCC < 41bp 0.512468249649908 0.873176029793204 0.3240636 0.5604695 prediction 0.721415560286591 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746451 chr7:150746452 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_20335 0 0 1 8 1 exosome 0.438718592967995 0.43871859994636 0.120939 0 hPsi_site_14059 iPseU_CNN:0.120939;iRNA_PseU:0 14060 chr1 16719757 16719757 1 + G A STAD 16719756 + 16719736 16719776 41 TCTCCTCCCAAAGTGCCCATTGTGATTCAGGACGATAGCCT TCTCCTCCCAAAGTGCCCATTATGATTCAGGACGATAGCCT < 41bp 0.523302511597303 0.884009804749986 0.53140664 0.63266814 prediction 0.721414586305366 Functional Gain - SZRD1 ENSG00000055070 CDS Human protein_coding chr1:16719756 chr1:16719757 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20336 0 0 1 0 2 Cytosol 0.43871857580853 0.438716696145591 0.202523 0 hPsi_site_14060 iPseU_CNN:0.202523;iRNA_PseU:0 14061 chr17 79502107 79502107 1 + G A ESCA 79502106 + 79502086 79502126 41 GTCTCAGCCAATCAGGATGATGAACTAGACCACGAGACCTT GTCTCAGCCAATCAGGATGATAAACTAGACCACGAGACCTT < 41bp 0.480490562369702 0.860706810391977 0.38927335 0.682384 prediction 0.721413620783955 Functional Gain - FSCN2 ENSG00000186765 CDS Human protein_coding chr17:79502106 chr17:79502107 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_20337 0 0 0 0 1 chromatin 0.439628179603175 0.438718525509619 0.364768 0 hPsi_site_14061 iPseU_CNN:0.364768;iRNA_PseU:0 14062 chr2 113676262 113676262 1 + G A HNSC 113676261 + 113676241 113676281 41 CTCACCCCGGATGGTTCATCTGCACCTCCTGCAATTGTAAT CTCACCCCGGATGGTTCATCTACACCTCCTGCAATTGTAAT < 41bp 0.484807245842227 0.860701419168674 0.29746178 0.46663502 prediction 0.721402838337348 Functional Gain - IL37 ENSG00000125571 CDS Human protein_coding chr2:113676261 chr2:113676262 nonsynonymous SNV 0.018 1 22 hPsi_associated_SNPs_20338 0 0 0 0 0 exosome 0.438718554985835 0.438716734066194 0 0 hPsi_site_14062 iPseU_CNN:0;iRNA_PseU:0 14063 chr2 97463315 97463315 1 + G A UCEC 97463314 + 97463294 97463334 41 GACTTCTCTGCCTTCAAGGATGCGGACAATGAGCTCAAAGT GACTTCTCTGCCTTCAAGGATACGGACAATGAGCTCAAAGT < 41bp 0.470497359675408 0.860700716383835 0.3547967 0.65160084 prediction 0.72140143276767 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97463314 chr2:97463315 nonsynonymous SNV 0.188 0 22 hPsi_associated_SNPs_20339 0 0 1 0 2 chromatin 0.438727859720079 0.439023951218853 0.30320168 0 hPsi_site_14063 iPseU_CNN:0.30320168;iRNA_PseU:0 14064 chr1 12837340 12837340 1 + G A UCEC 12837339 + 12837319 12837359 41 GGAGCAAGCTGAGGCCACCCTGCAGACCCTGGACTTAGAGG GGAGCAAGCTGAGGCCACCCTACAGACCCTGGACTTAGAGG < 41bp 0.508336343045244 0.869033731970263 0.39711237 0.55736095 prediction 0.721394777850037 Functional Gain - PRAMEF12 ENSG00000116726 CDS Human protein_coding chr1:12837339 chr1:12837340 synonymous SNV . 0 22 hPsi_associated_SNPs_20340 0 0 0 0 0 unknown 0.438718592997388 0.438718593803724 0.1147219 0 hPsi_site_14064 iPseU_CNN:0.1147219;iRNA_PseU:0 14065 chr2 219294086 219294086 1 + G A SKCM 219294085 + 219294065 219294105 41 GGCGTGGTGGACGGAGAGAATGAATTGGCATCCCCGAAGCT GGCGTGGTGGACGGAGAGAATAAATTGGCATCCCCGAAGCT < 41bp 0.52964852732715 0.890342039703931 0.25543457 0.40083227 prediction 0.721387024753561 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219294085 chr2:219294086 nonsynonymous SNV 0.019 3 22 hPsi_associated_SNPs_20341 0 0 1 0 1 Nucleus 0.438586189130156 0.43871889266179 0 0 hPsi_site_14065 iPseU_CNN:0;iRNA_PseU:0 14066 chr1 209849155 209849155 1 + G A BRCA 209849154 + 209849134 209849174 41 CTTCGGCGTGGTGCTCGGCCTGATGGAGACTGTGTGCAGCC CTTCGGCGTGGTGCTCGGCCTAATGGAGACTGTGTGCAGCC < 41bp 0.497863965990005 0.86067065490601 0.3647676 0.8183222 prediction 0.721341309812019 Functional Gain - G0S2 ENSG00000123689 CDS Human protein_coding chr1:209849154 chr1:209849155 synonymous SNV . 0 22 hPsi_associated_SNPs_20342 0 0 1 0 0 exosome 0.438718694637582 0.438718593043822 0.6366444 0 hPsi_site_14066 iPseU_CNN:0.6366444;iRNA_PseU:0 14067 chr16 66975082 66975082 1 + G A STAD 66975081 + 66975061 66975101 41 ACTCTGAGGCCCTGGTGGGCTGCCTGCGGGGCAAGAGTAAA ACTCTGAGGCCCTGGTGGGCTACCTGCGGGGCAAGAGTAAA < 41bp 0.527912527627258 0.888582457829401 0.18337882 0.5905709 prediction 0.721339860404287 Functional Gain - CES2 ENSG00000172831 CDS Human protein_coding chr16:66975081 chr16:66975082 nonsynonymous SNV 0.963 4 22 hPsi_associated_SNPs_20343 0 0 1 0 2 Cytosol 0.438725705165706 0.438715666117875 0.1811418 0 hPsi_site_14067 iPseU_CNN:0.1811418;iRNA_PseU:0 14068 chr6 41029318 41029318 1 + G A SKCM 41029317 + 41029297 41029337 41 GGTATGTGTCCTCCAGCCCCTGTGCAGCGTGTGCTGACCGC GGTATGTGTCCTCCAGCCCCTATGCAGCGTGTGCTGACCGC < 41bp 0.464951438391324 0.86066132692508 0.22734979 0.23114124 prediction 0.72132265385016 Functional Gain - APOBEC2 ENSG00000124701 CDS Human protein_coding chr6:41029317 chr6:41029318 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_20344 0 0 0 0 1 chromatin 0.438718593185838 0.438718595761787 0 0 hPsi_site_14068 iPseU_CNN:0;iRNA_PseU:0 14069 chr20 60776067 60776067 1 + G A LUSC 60776066 + 60776046 60776086 41 GGAGCAGCTGCTGTTGCACCTGAAGGTGCTGTATGACGCCT GGAGCAGCTGCTGTTGCACCTAAAGGTGCTGTATGACGCCT < 41bp 0.492159436445314 0.860646954618157 0.26133674 0.2996419 prediction 0.721293909236314 Functional Gain - MTG2 ENSG00000101181 CDS Human protein_coding chr20:60776066 chr20:60776067 synonymous SNV . 0 22 hPsi_associated_SNPs_20345 0 0 0 0 0 Ribosome 0.439102209953322 0.438465627393712 0 0 hPsi_site_14069 iPseU_CNN:0;iRNA_PseU:0 14070 chr15 40659499 40659499 1 + G A rs148627970 40659498 + 40659478 40659518 41 CAGAACAAGTCCCCACGCTGTGCCCAGGTTCCCACCAAGTG CAGAACAAGTCCCCACGCTGTACCCAGGTTCCCACCAAGTG < 41bp 0.48212874320612 0.860640984124858 0.30141312 0.7370332 prediction 0.721281968249716 Functional Gain - DISP2 ENSG00000140323 CDS Human protein_coding chr15:40659498 chr15:40659499 nonsynonymous SNV 0.910 0 22 hPsi_associated_SNPs_20346 0 0 0 0 0 nucleus 0.438712096766851 0.438718025614867 0.4740664 0 hPsi_site_14070 iPseU_CNN:0.4740664;iRNA_PseU:0 14071 chr10 12191919 12191919 1 + G A SARC 12191918 + 12191898 12191938 41 ACGGGGATGTATGGGGACCCTGCAGAAATGGGTGCCGGAAT ACGGGGATGTATGGGGACCCTACAGAAATGGGTGCCGGAAT < 41bp 0.480363960739395 0.860628788105201 0.2824964 0.42784765 prediction 0.721257576210401 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191918 chr10:12191919 nonsynonymous SNV 0.867 1 22 hPsi_associated_SNPs_20347 0 0 1 1 1 Ribosome 0.438718238770982 0.43871642478292 0 0 hPsi_site_14071 iPseU_CNN:0;iRNA_PseU:0 14072 chr1 12854545 12854545 1 + G A GBM 12854544 + 12854524 12854564 41 GAACTCCAAGGACGGTTAGTTGCCAAATTCAGCTCTGTGTT GAACTCCAAGGACGGTTAGTTACCAAATTCAGCTCTGTGTT < 41bp 0.490686466904359 0.860619786139393 0.29399884 0.654877 prediction 0.721239572278787 Functional Gain - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12854544 chr1:12854545 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20348 0 0 0 0 1 unknown 0.437880154559129 0.442088823233184 0.309754 0 hPsi_site_14072 iPseU_CNN:0.309754;iRNA_PseU:0 14073 chr4 71063824 71063824 1 + G A BLCA 71063823 + 71063803 71063843 41 GGAGCCCAGGCAGGCCAAGTTGATCCCTTACAGCTTCAAAC GGAGCCCAGGCAGGCCAAGTTAATCCCTTACAGCTTCAAAC < 41bp 0.487529406159204 0.860588956259293 0.33500534 0.63952696 prediction 0.721177912518587 Functional Gain - ODAM ENSG00000109205 CDS Human protein_coding chr4:71063823 chr4:71063824 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_20349 0 0 0 0 1 exosome 0.438718593839919 0.438718593054864 0.27905392 0 hPsi_site_14073 iPseU_CNN:0.27905392;iRNA_PseU:0 14074 chr22 37331409 37331409 1 + G A UCEC 37331408 + 37331388 37331428 41 GGAAGTGCTGCCTATGTGGGTGCTGGCCCTCATCGTGATCT GGAAGTGCTGCCTATGTGGGTACTGGCCCTCATCGTGATCT < 41bp 0.517740630989388 0.878326862552063 0.22672924 0.49788827 prediction 0.721172463125351 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37331408 chr22:37331409 synonymous SNV . 0 22 hPsi_associated_SNPs_20350 0 0 0 0 2 Endoplasmic reticulum 0.438718368400403 0.43871895952677 0 0 hPsi_site_14074 iPseU_CNN:0;iRNA_PseU:0 14075 chr17 42429099 42429099 1 + G A UCEC 42429098 + 42429078 42429118 41 CCTGTGATAATGTCAGCAGCTGTCCCTCCTCCGATACCTGC CCTGTGATAATGTCAGCAGCTATCCCTCCTCCGATACCTGC < 41bp 0.476145820999056 0.860584489920967 0.4229607 0.7553523 prediction 0.721168979841934 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42429098 chr17:42429099 nonsynonymous SNV 0.441 5 22 hPsi_associated_SNPs_20351 0 0 1 0 1 Endoplasmic reticulum 0.438722346583044 0.438552908239474 0.5107046 0 hPsi_site_14075 iPseU_CNN:0.5107046;iRNA_PseU:0 14076 chr1 47533275 47533275 1 + G A SKCM 47533274 + 47533254 47533294 41 GGTTGTACCAGAGGAGGAGATGGATGATCAGAGCCCTGCAC GGTTGTACCAGAGGAGGAGATAGATGATCAGAGCCCTGCAC < 41bp 0.501480963575506 0.862063824988213 0.24144381 0.2719333 prediction 0.721165722825414 Functional Gain - CYP4Z1 ENSG00000186160 CDS Human protein_coding chr1:47533274 chr1:47533275 stopgain 0.005 0 22 hPsi_associated_SNPs_20352 0 0 0 0 1 exosome 0.438718594852669 0.438706011772384 0 0 hPsi_site_14076 iPseU_CNN:0;iRNA_PseU:0 14077 chr19 13888907 13888907 1 + G A BRCA 13888906 + 13888886 13888926 41 GAAGAAGATCGAACATGACGTGGTGATGAAAGCCAGCAGCA GAAGAAGATCGAACATGACGTAGTGATGAAAGCCAGCAGCA < 41bp 0.516178715261555 0.876759952683597 0.2935133 0.5799239 prediction 0.721162474844082 Functional Gain - C19orf53 ENSG00000104979 CDS Human protein_coding chr19:13888906 chr19:13888907 synonymous SNV . 0 22 hPsi_associated_SNPs_20353 0 0 1 0 1 Cytosol 0.438710461978095 0.438721812171217 0.1598478 0 hPsi_site_14077 iPseU_CNN:0.1598478;iRNA_PseU:0 14078 chr8 134232858 134232858 1 + G A UCEC 134232857 + 134232837 134232877 41 GGGCTGCGTCCTGGATGGGGTGCGCTACAACAACGGCCAGT GGGCTGCGTCCTGGATGGGGTACGCTACAACAACGGCCAGT < 41bp 0.523537818200253 0.884118057183491 0.4347514 0.9343811 prediction 0.721160477966476 Functional Gain - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134232857 chr8:134232858 synonymous SNV . 0 22 hPsi_associated_SNPs_20354 0 0 0 0 1 nucleus 0.438662509059638 0.43870827574372 0.8687622 0 hPsi_site_14078 iPseU_CNN:0.8687622;iRNA_PseU:0 14079 chr1 46739349 46739349 1 + G A BLCA 46739348 + 46739328 46739368 41 GTGACCCGAAGCCGTAGCAGTGACAAAGTAGTGCTGGTGTC GTGACCCGAAGCCGTAGCAGTAACAAAGTAGTGCTGGTGTC < 41bp 0.477070049776998 0.860578514007649 0.38187432 0.6019629 prediction 0.721157028015298 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739348 chr1:46739349 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_20355 0 0 1 0 2 Ribosome 0.438719033750248 0.438849315935451 0.2039258 0 hPsi_site_14079 iPseU_CNN:0.2039258;iRNA_PseU:0 14080 chr11 71507126 71507126 1 + G A rs148013436 71507125 + 71507105 71507145 41 TCCTGCGGAGGCTGGCTGCCTGCCGGGAGCACCAGCGGGCT TCCTGCGGAGGCTGGCTGCCTACCGGGAGCACCAGCGGGCT < 41bp 0.477901950493489 0.860542693684227 0.23186004 0.41610295 prediction 0.721085387368453 Functional Gain - FAM86C1 ENSG00000158483 CDS Human protein_coding chr11:71507125 chr11:71507126 nonsynonymous SNV 0.016 2 22 hPsi_associated_SNPs_20356 0 0 0 0 2 Ribosome 0.438718645600504 0.438718427497906 0 0 hPsi_site_14080 iPseU_CNN:0;iRNA_PseU:0 14081 chr22 50987943 50987943 1 + G A SKCM 50987942 + 50987922 50987962 41 CACGAGGCTGTGGCCTGCCGTGGGGACATCTACGTCACCGG CACGAGGCTGTGGCCTGCCGTAGGGACATCTACGTCACCGG < 41bp 0.484425307688929 0.860541620207395 0.35528767 0.44538793 prediction 0.72108324041479 Functional Gain - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987942 chr22:50987943 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_20357 0 0 0 0 0 nucleolus 0.43868637681376 0.438723426578961 0 0 hPsi_site_14081 iPseU_CNN:0;iRNA_PseU:0 14082 chr2 39931236 39931236 1 + G A UCEC 39931235 + 39931215 39931255 41 TTCAAGGTATTGCGCAGCGATGCACGGCCATCAAGTACCAC TTCAAGGTATTGCGCAGCGATACACGGCCATCAAGTACCAC < 41bp 0.522294599372469 0.882835667219103 0.30178487 0.80070955 prediction 0.721082135693267 Functional Gain - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39931235 chr2:39931236 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20358 0 0 0 0 2 exosome 0.43703756547799 0.438450152858771 0.6014191 0 hPsi_site_14082 iPseU_CNN:0.6014191;iRNA_PseU:0 14083 chr3 195955755 195955755 1 + G A UCEC 195955754 + 195955734 195955774 41 AACGCTGACCCTGGTGGGCCTGTTTCTCGTCCCCGACGGCA AACGCTGACCCTGGTGGGCCTATTTCTCGTCCCCGACGGCA < 41bp 0.530198127798163 0.89073126535427 0.19175813 0.32486382 prediction 0.721066275112214 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955754 chr3:195955755 synonymous SNV . 0 22 hPsi_associated_SNPs_20359 0 0 1 0 2 exosome 0.438718593036446 0.438718592970686 0 0 hPsi_site_14083 iPseU_CNN:0;iRNA_PseU:0 14084 chr12 50037093 50037093 1 + G A LUAD 50037092 + 50037072 50037112 41 AACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGA AACCCCTCAGAGTCAGGCTCTAAGCCCTCTTCCTCACTTGA < 41bp 0.468720135960345 0.860528779030247 0.51037395 0.8338076 prediction 0.721057558060495 Functional Gain - PRPF40B ENSG00000110844 CDS Human protein_coding chr12:50037092 chr12:50037093 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20360 0 0 1 0 2 Cytosol 0.438718588222181 0.438717074572783 0.6468673 0 hPsi_site_14084 iPseU_CNN:0.6468673;iRNA_PseU:0 14085 chr6 96990799 96990799 1 + G A BRCA 96990798 + 96990778 96990818 41 GGAAGCATGAGAGGAGGAGGTGGGGGCAATGCCAGAGAGTA GGAAGCATGAGAGGAGGAGGTAGGGGCAATGCCAGAGAGTA < 41bp 0.506277286306402 0.866791119444373 0.25781745 0.5810266 prediction 0.721027666275943 Functional Gain - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96990798 chr6:96990799 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20361 0 0 1 0 2 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0.1620532 0 hPsi_site_14085 iPseU_CNN:0.1620532;iRNA_PseU:0 14086 chr11 17742860 17742860 1 + G A rs369966548 17742859 + 17742839 17742879 41 AGACTGCCTGTCCAGCATCGTGGAGCGCATCTCCACCGAGA AGACTGCCTGTCCAGCATCGTAGAGCGCATCTCCACCGAGA < 41bp 0.488640178683941 0.860513570020439 0.26487648 0.69959396 prediction 0.721027140040878 Functional Gain - MYOD1 ENSG00000129152 CDS Human protein_coding chr11:17742859 chr11:17742860 synonymous SNV . 0 22 hPsi_associated_SNPs_20362 0 0 0 0 1 unknown 0.438718143731413 0.438770135039907 0.39918792 0 hPsi_site_14086 iPseU_CNN:0.39918792;iRNA_PseU:0 14087 chr3 122579018 122579018 1 + G A CESC 122579017 + 122578997 122579037 41 GTGGTTCACCCTGACCTGTTTGAACAGCATCACACACCTAC GTGGTTCACCCTGACCTGTTTAAACAGCATCACACACCTAC < 41bp 0.489798239284224 0.860509221979657 0.2912126 0.57515484 prediction 0.721018443959313 Functional Gain - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122579017 chr3:122579018 synonymous SNV . 0 22 hPsi_associated_SNPs_20363 0 0 0 0 2 Endoplasmic reticulum 0.438721730418518 0.438708397143824 0.15030968 0 hPsi_site_14087 iPseU_CNN:0.15030968;iRNA_PseU:0 14088 chrX 135631122 135631122 1 + G A OV 135631121 + 135631101 135631141 41 GGCAACCCTGGCCAGATAGCTGGAAGCACAGGGTTGCTCTT GGCAACCCTGGCCAGATAGCTAGAAGCACAGGGTTGCTCTT < 41bp 0.511908420117664 0.872405953610105 0.25995982 0.48487985 prediction 0.720995066984881 Functional Gain - VGLL1 ENSG00000102243 CDS Human protein_coding chrX:135631121 chrX:135631122 nonsynonymous SNV 0.665 1 22 hPsi_associated_SNPs_20364 0 0 0 0 1 unknown 0.438718589939749 0.438716647340158 0 0 hPsi_site_14088 iPseU_CNN:0;iRNA_PseU:0 14089 chr19 19656087 19656087 1 + G A LIHC 19656086 + 19656066 19656106 41 GGACAAGTACGAGTACAACGTGGTCCCCTTCCGAGAGGGCA GGACAAGTACGAGTACAACGTAGTCCCCTTCCGAGAGGGCA < 41bp 0.480037981540329 0.860491830198832 0.22731104 0.781011 prediction 0.720983660397663 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19656086 chr19:19656087 synonymous SNV . 0 22 hPsi_associated_SNPs_20365 0 0 0 0 0 exosome 0.438722863177767 0.438709390921628 0.562022 0 hPsi_site_14089 iPseU_CNN:0.562022;iRNA_PseU:0 14090 chr8 87423860 87423860 1 + G A UCEC 87423859 + 87423839 87423879 41 AAAATGCCTTGTCTCCAAATTGCACTAGTACTACTGTTGAA AAAATGCCTTGTCTCCAAATTACACTAGTACTACTGTTGAA < 41bp 0.514997268989168 0.875486785234895 0.22504383 0.23558405 prediction 0.720979032491454 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87423859 chr8:87423860 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_20366 0 0 0 0 1 Cytosol 0.438717302671925 0.438718592925191 0 0 hPsi_site_14090 iPseU_CNN:0;iRNA_PseU:0 14091 chr14 78365560 78365560 1 + G A GBM 78365559 + 78365539 78365579 41 CTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCT CTCAATGAAGGGAGGAATGCTAAGAAGGTGTCCCAGATGCT < 41bp 0.494670163975492 0.860485588764257 0.21956095 0.33873072 prediction 0.720971177528513 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78365559 chr14:78365560 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20367 0 0 0 0 1 chromatin 0.439095224647349 0.438718527026253 0 0 hPsi_site_14091 iPseU_CNN:0;iRNA_PseU:0 14092 chr1 153665889 153665889 1 + G A CESC 153665888 + 153665868 153665908 41 GGGGGAGTAGCACCCGAGGCTGACCTGCCTCCTCTCCTATC GGGGGAGTAGCACCCGAGGCTAACCTGCCTCCTCTCCTATC < 41bp 0.502617709103212 0.863100628930835 0.3130163 0.49889156 prediction 0.720965839655246 Functional Gain - NPR1 ENSG00000169418 CDS Human protein_coding chr1:153665888 chr1:153665889 synonymous SNV . 0 22 hPsi_associated_SNPs_20368 0 0 0 0 1 Cytosol 0.438718833571372 0.438718592994754 0 0 hPsi_site_14092 iPseU_CNN:0;iRNA_PseU:0 14093 chr10 122662604 122662604 1 + G A UCEC 122662603 + 122662583 122662623 41 TCGGAGCTGCACTTCTGGACTGTCGCTGCCCACTACCTGCA TCGGAGCTGCACTTCTGGACTATCGCTGCCCACTACCTGCA < 41bp 0.464610685587089 0.860462102114441 0.27731377 0.64856696 prediction 0.720924204228883 Functional Gain - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122662603 chr10:122662604 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_20369 0 0 1 0 1 Nucleus 0.438718540663971 0.438718592730021 0.29713392 0 hPsi_site_14093 iPseU_CNN:0.29713392;iRNA_PseU:0 14094 chr1 228033709 228033709 1 + G A SKCM 228033708 + 228033688 228033728 41 AACCGCAGCTGGTTGCAGATTGGAATTGTGAGCTGGGGCCG AACCGCAGCTGGTTGCAGATTAGAATTGTGAGCTGGGGCCG < 41bp 0.513817711213015 0.87427727348148 0.25861675 0.3669903 prediction 0.720919124536931 Functional Gain - PRSS38 ENSG00000185888 CDS Human protein_coding chr1:228033708 chr1:228033709 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20370 0 0 0 0 1 unknown 0.438718592976944 0.438718581669828 0 0 hPsi_site_14094 iPseU_CNN:0;iRNA_PseU:0 14095 chr11 119044556 119044556 1 + G A BLCA 119044555 + 119044535 119044575 41 CTGCTCATCCCCTTCTCCTGTGAGGACCTGTCATCCCTGGG CTGCTCATCCCCTTCTCCTGTAAGGACCTGTCATCCCTGGG < 41bp 0.527000390347155 0.887454509689938 0.4608589 0.5345788 prediction 0.720908238685567 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119044555 chr11:119044556 nonsynonymous SNV 0.960 3 22 hPsi_associated_SNPs_20371 0 0 0 0 0 exosome 0.438718592994955 0.438707417556398 0.0691576 0 hPsi_site_14095 iPseU_CNN:0.0691576;iRNA_PseU:0 14096 chr1 53072439 53072439 1 + G A UCEC 53072438 + 53072418 53072458 41 GCAGCAGCTGCAGCGAGACCTGGGCCCCCACCACTTTAACG GCAGCAGCTGCAGCGAGACCTAGGCCCCCACCACTTTAACG < 41bp 0.465591665313125 0.860450742918446 0.14213383 0.27238235 prediction 0.720901485836892 Functional Gain - GPX7 ENSG00000116157 CDS Human protein_coding chr1:53072438 chr1:53072439 synonymous SNV . 0 22 hPsi_associated_SNPs_20372 0 0 0 0 1 exosome 0.438718579901837 0.440182274906147 0 0 hPsi_site_14096 iPseU_CNN:0;iRNA_PseU:0 14097 chr14 77319694 77319694 1 + G A HNSC 77319693 + 77319673 77319713 41 GGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAG GGTGGCAATGACATCGGCAATAAAGGGGCCTCCAAAATCAG < 41bp 0.482332399078179 0.860439628543994 0.18092424 0.24618289 prediction 0.720879257087989 Functional Gain - LRRC74A ENSG00000100565 CDS Human protein_coding chr14:77319693 chr14:77319694 nonsynonymous SNV 0.123 0 22 hPsi_associated_SNPs_20373 0 0 0 1 1 exosome 0.438718595202119 0.438718593004208 0 0 hPsi_site_14097 iPseU_CNN:0;iRNA_PseU:0 14098 chr3 184298273 184298273 1 + G A SKCM 184298272 + 184298252 184298292 41 CATGAAGTACCTGTCCGAGATGAACTATGTGCACCGCGACC CATGAAGTACCTGTCCGAGATAAACTATGTGCACCGCGACC < 41bp 0.473129952815517 0.860438851680634 0.23179412 0.36624 prediction 0.720877703361269 Functional Gain - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184298272 chr3:184298273 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20374 0 0 0 0 1 Endoplasmic reticulum 0.439366828322093 0.440289874420341 0 0 hPsi_site_14098 iPseU_CNN:0;iRNA_PseU:0 14099 chr15 75942049 75942049 1 + G A UCEC 75942048 + 75942028 75942068 41 GGCCTTCATCCTGGGTGATGTGCCCATGATGGCCAAGATCG GGCCTTCATCCTGGGTGATGTACCCATGATGGCCAAGATCG < 41bp 0.480546787495231 0.860420207740277 0.24551505 0.6002346 prediction 0.720840415480555 Functional Gain - SNX33 ENSG00000173548 CDS Human protein_coding chr15:75942048 chr15:75942049 synonymous SNV . 0 22 hPsi_associated_SNPs_20375 0 0 0 0 0 membrane 0.438717902201794 0.43843955275332 0.2004692 0 hPsi_site_14099 iPseU_CNN:0.2004692;iRNA_PseU:0 14100 chr9 32434659 32434659 1 + G A COAD 32434658 + 32434638 32434678 41 ATCTCCCCAGCTGGAAATATTGCAAGAAACAGTCCTGCTGC ATCTCCCCAGCTGGAAATATTACAAGAAACAGTCCTGCTGC < 41bp 0.494349336770119 0.860418692869809 0.26073962 0.35140014 prediction 0.720837385739617 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32434658 chr9:32434659 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20376 0 0 0 2 0 Ribosome 0.43871859290026 0.438718592966974 0 0 hPsi_site_14100 iPseU_CNN:0;iRNA_PseU:0 14101 chr17 70118974 70118974 1 + G A CESC 70118973 + 70118953 70118993 41 GCCGCGGCGGAGGAAGTCGGTGAAGAACGGGCAGGCGGAGG GCCGCGGCGGAGGAAGTCGGTAAAGAACGGGCAGGCGGAGG < 41bp 0.527395708575405 0.88780240297157 0.5323711 0.8182678 prediction 0.720813388792329 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70118973 chr17:70118974 synonymous SNV . 0 22 hPsi_associated_SNPs_20377 0 0 1 0 0 Cytosol 0.438719240373956 0.438718592993429 0.5717934 0 hPsi_site_14101 iPseU_CNN:0.5717934;iRNA_PseU:0 14102 chr11 66240817 66240817 1 + G A UCEC 66240816 + 66240796 66240836 41 CAGAGCACCATCTCCCGCTATGCCTGCCGCATCCTCTGTGA CAGAGCACCATCTCCCGCTATACCTGCCGCATCCTCTGTGA < 41bp 0.463080438909862 0.860403761550093 0.26070017 0.6637728 prediction 0.720807523100186 Functional Gain - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66240816 chr11:66240817 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20378 0 0 0 0 1 Ribosome 0.437677991212064 0.438209234961115 0.3275456 0 hPsi_site_14102 iPseU_CNN:0.3275456;iRNA_PseU:0 14103 chr8 144464073 144464073 1 + G A rs34746679 144464072 + 144464052 144464092 41 GTGGTGACGGAGCTGAAGGCTGCGGGAGAGGCGGGCGCCAG GTGGTGACGGAGCTGAAGGCTACGGGAGAGGCGGGCGCCAG < 41bp 0.482975522476861 0.860401041915303 0.25036865 0.6765754 prediction 0.720802083830606 Functional Gain - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144464072 chr8:144464073 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20379 0 0 1 0 2 Ribosome 0.43871856660031 0.438717929204421 0.3531508 0 hPsi_site_14103 iPseU_CNN:0.3531508;iRNA_PseU:0 14104 chr4 158057789 158057789 1 + G A COAD 158057788 + 158057768 158057808 41 AAAAGTGCCAATTTTCATGATGTGACCCAGGAAAACATCCT AAAAGTGCCAATTTTCATGATATGACCCAGGAAAACATCCT < 41bp 0.511229762460313 0.871621977528708 0.22934082 0.4596549 prediction 0.72078443013679 Functional Gain - GLRB ENSG00000109738 CDS Human protein_coding chr4:158057788 chr4:158057789 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_20380 0 0 1 0 1 exosome 0.43869562541787 0.438620026066866 0 0 hPsi_site_14104 iPseU_CNN:0;iRNA_PseU:0 14105 chr1 46034315 46034315 1 + G A UCEC 46034314 + 46034294 46034334 41 GGAACCAGTAGTCCTGGCATTGGCTGAAAAGTATGGCCGAT GGAACCAGTAGTCCTGGCATTAGCTGAAAAGTATGGCCGAT < 41bp 0.51715628627707 0.877545953694827 0.1615186 0.2781149 prediction 0.720779334835514 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46034314 chr1:46034315 synonymous SNV . 0 22 hPsi_associated_SNPs_20381 0 0 1 0 1 Ribosome 0.438720561294959 0.438718592894203 0 0 hPsi_site_14105 iPseU_CNN:0;iRNA_PseU:0 14106 chr22 42387607 42387607 1 + G A UCEC 42387606 + 42387586 42387626 41 GAGCTTGAAGTAAATGGCATTGAATTCTACCCCCAGAAGGA GAGCTTGAAGTAAATGGCATTAAATTCTACCCCCAGAAGGA < 41bp 0.527631721164037 0.888016182147294 0.26571202 0.3860991 prediction 0.720768921966514 Functional Gain - SEPT3 ENSG00000100167 CDS Human protein_coding chr22:42387606 chr22:42387607 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20382 0 0 1 0 2 exosome 0.438723656632866 0.438713045646853 0 0 hPsi_site_14106 iPseU_CNN:0;iRNA_PseU:0 14107 chr3 137483983 137483983 1 + G A CESC 137483982 + 137483962 137484002 41 GGGGGCCTCCGACGGCCTCCTGAGCGCGCCCGAGAAAGCCC GGGGGCCTCCGACGGCCTCCTAAGCGCGCCCGAGAAAGCCC < 41bp 0.500527993258045 0.860903722674683 0.1472064 0.27645454 prediction 0.720751458833275 Functional Gain - SOX14 ENSG00000168875 CDS Human protein_coding chr3:137483982 chr3:137483983 synonymous SNV . 0 22 hPsi_associated_SNPs_20383 0 0 0 0 0 exosome 0.438718593297289 0.438718592957789 0 0 hPsi_site_14107 iPseU_CNN:0;iRNA_PseU:0 14108 chr19 4792955 4792955 1 + G A COAD 4792954 + 4792934 4792974 41 CACCGAGGAGCTGGAGGCGCTGATCACCGACCCGGATGAGA CACCGAGGAGCTGGAGGCGCTAATCACCGACCCGGATGAGA < 41bp 0.481177789248749 0.86036781468173 0.20501435 0.5686611 prediction 0.720735629363461 Functional Gain - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4792954 chr19:4792955 synonymous SNV . 0 22 hPsi_associated_SNPs_20384 0 0 1 0 0 Ribosome 0.438718591668019 0.438718593005026 0.1373222 0 hPsi_site_14108 iPseU_CNN:0.1373222;iRNA_PseU:0 14109 chr9 5055756 5055756 1 + G A HNSC 5055755 + 5055735 5055775 41 GGTTCAAATGAAAGCCGAGTTGTAACTATCCATAAGCAAGA GGTTCAAATGAAAGCCGAGTTATAACTATCCATAAGCAAGA < 41bp 0.491607233442881 0.86036215838274 0.3396566 0.5721117 prediction 0.720724316765479 Functional Gain - JAK2 ENSG00000096968 CDS Human protein_coding chr9:5055755 chr9:5055756 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20385 0 0 0 0 2 chromatin 0.438718595450929 0.438718705618501 0.1442234 0 hPsi_site_14109 iPseU_CNN:0.1442234;iRNA_PseU:0 14110 chr3 26751914 26751914 1 + G A SKCM 26751913 + 26751893 26751933 41 AGCAGGCAGAAGAAAGCAGATGAACCTGATGATATTAGCAC AGCAGGCAGAAGAAAGCAGATAAACCTGATGATATTAGCAC < 41bp 0.491319195788194 0.860359521517354 0.3158366 0.72682405 prediction 0.720719043034707 Functional Gain - LRRC3B ENSG00000179796 CDS Human protein_coding chr3:26751913 chr3:26751914 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20386 0 0 0 0 0 exosome 0.438703526622316 0.438768128449952 0.4536481 0 hPsi_site_14110 iPseU_CNN:0.4536481;iRNA_PseU:0 14111 chr1 173855179 173855179 1 + G A COAD 173855178 + 173855158 173855198 41 GTCACATCTCGAGGACAAGCTGAGGAAGAGTCACCTTCACA GTCACATCTCGAGGACAAGCTAAGGAAGAGTCACCTTCACA < 41bp 0.4963817531985 0.86035640904757 0.31801772 0.5458708 prediction 0.72071281809514 Functional Gain - ZBTB37 ENSG00000185278 CDS Human protein_coding chr1:173855178 chr1:173855179 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_20387 0 0 1 0 0 chromatin 0.438972157219593 0.438808412187807 0.0917416 0 hPsi_site_14111 iPseU_CNN:0.0917416;iRNA_PseU:0 14112 chr19 5827765 5827765 1 + G A rs79744308 5827764 + 5827744 5827784 41 CTTCCTCCCCTCGCAGACCGTGCACTCCTGCAGGGGGCCCC CTTCCTCCCCTCGCAGACCGTACACTCCTGCAGGGGGCCCC < 41bp 0.5030339286698 0.863377846780067 0.2260339 0.69996583 prediction 0.720687836220534 Functional Gain - NRTN ENSG00000171119 CDS Human protein_coding chr19:5827764 chr19:5827765 nonsynonymous SNV 0.892 3 22 hPsi_associated_SNPs_20388 1 0 0 0 1 Ribosome 0.4387185973184 0.43871861039393 0.39993166 0 hPsi_site_14112 iPseU_CNN:0.39993166;iRNA_PseU:0 14113 chr11 986878 986878 1 + G A UCEC 986877 + 986857 986897 41 CTACCTGGCCCTGGAGAGCATGTGCACGCTGGCCAGCTCTG CTACCTGGCCCTGGAGAGCATATGCACGCTGGCCAGCTCTG < 41bp 0.466076611786441 0.86032057031113 0.32397315 0.34559166 prediction 0.720641140622261 Functional Gain - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:986877 chr11:986878 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20389 0 0 1 1 1 Nucleus 0.438724232842394 0.43872342931983 0 0 hPsi_site_14113 iPseU_CNN:0;iRNA_PseU:0 14114 chr9 125512726 125512726 1 + G A BLCA 125512725 + 125512705 125512745 41 ATCCTCCAGCCAGATGGTGGTGATGACTGAGACCTTAGCTG ATCCTCCAGCCAGATGGTGGTAATGACTGAGACCTTAGCTG < 41bp 0.493765674380522 0.860313866240002 0.25331664 0.5433843 prediction 0.720627732480004 Functional Gain - OR1L6 ENSG00000171459 CDS Human protein_coding chr9:125512725 chr9:125512726 synonymous SNV . 0 22 hPsi_associated_SNPs_20390 0 0 0 0 0 unknown 0.438468245484491 0.438657181427165 0.0867686000000001 0 hPsi_site_14114 iPseU_CNN:0.0867686000000001;iRNA_PseU:0 14115 chr22 44319878 44319878 1 + G A CESC 44319877 + 44319857 44319897 41 CGTCGGGGCGACCCGCTGCCTGAGCGAGCACGCCCCGCACC CGTCGGGGCGACCCGCTGCCTAAGCGAGCACGCCCCGCACC < 41bp 0.502779525021592 0.863091570658541 0.33646223 0.74457014 prediction 0.720624091273899 Functional Gain - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44319877 chr22:44319878 synonymous SNV . 0 22 hPsi_associated_SNPs_20391 0 0 1 0 0 cytosol 0.438715163552639 0.438718593004806 0.48914028 0 hPsi_site_14115 iPseU_CNN:0.48914028;iRNA_PseU:0 14116 chr17 7320771 7320771 1 + G A CESC 7320770 + 7320750 7320790 41 CCACCTGGCGGCTCAGGCTCTGGCGTGCCTGGTGGGGGCCC CCACCTGGCGGCTCAGGCTCTAGCGTGCCTGGTGGGGGCCC < 41bp 0.502892030471131 0.863203365296695 0.3451029 0.63545376 prediction 0.720622669651129 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320770 chr17:7320771 nonsynonymous SNV 0.791 0 22 hPsi_associated_SNPs_20392 0 0 1 0 0 chromatin 0.438638930123432 0.438718451451094 0.27090752 0 hPsi_site_14116 iPseU_CNN:0.27090752;iRNA_PseU:0 14117 chr10 71160774 71160774 1 + G A STAD 71160773 + 71160753 71160793 41 CAGAATCATGCACCAGACGGTGAAGGAACTGTCACCAAAAT CAGAATCATGCACCAGACGGTAAAGGAACTGTCACCAAAAT < 41bp 0.49294258314549 0.860310464740804 0.3120549 0.89239216 prediction 0.720620929481609 Functional Gain - HK1 ENSG00000156515 CDS Human protein_coding chr10:71160773 chr10:71160774 synonymous SNV . 0 22 hPsi_associated_SNPs_20393 0 0 1 0 1 chromatin 0.444064032541052 0.438703423998282 0.78478432 0 hPsi_site_14117 iPseU_CNN:0.78478432;iRNA_PseU:0 14118 chr10 102748742 102748742 1 + G A CESC 102748741 + 102748721 102748761 41 CTGATTAGTCGTCGAGATGCTGAGGTGGTACTGACGAGTCG CTGATTAGTCGTCGAGATGCTAAGGTGGTACTGACGAGTCG < 41bp 0.512338532438767 0.872645626584579 0.19176203 0.31786633 prediction 0.720614188291623 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748741 chr10:102748742 nonsynonymous SNV 0.740 4 22 hPsi_associated_SNPs_20394 0 0 1 0 0 unknown 0.438125587733269 0.438739682914396 0 0 hPsi_site_14118 iPseU_CNN:0;iRNA_PseU:0 14119 chr12 16036573 16036573 1 + G A SKCM 16036572 + 16036552 16036592 41 GGTGCAACACTGAATAAGGATGCCACCAAAGCAGCTACAGC GGTGCAACACTGAATAAGGATACCACCAAAGCAGCTACAGC < 41bp 0.515967476452641 0.876272861674007 0.3022966 0.59928346 prediction 0.720610770442732 Functional Gain - STRAP ENSG00000023734 CDS Human protein_coding chr12:16036572 chr12:16036573 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20395 0 0 1 0 1 Ribosome 0.43862718837413 0.438601189857803 0.19856692 0 hPsi_site_14119 iPseU_CNN:0.19856692;iRNA_PseU:0 14120 chr7 134644788 134644788 1 + G A LGG 134644787 + 134644767 134644807 41 CTTCCTGTTCCTGCTGAAGGTGTACGCAACATCAAGAGTAT CTTCCTGTTCCTGCTGAAGGTATACGCAACATCAAGAGTAT < 41bp 0.49176385837131 0.860305302494705 0.32205996 0.7108841 prediction 0.72061060498941 Functional Gain - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134644787 chr7:134644788 nonsynonymous SNV 0.045 3 22 hPsi_associated_SNPs_20396 0 0 1 0 1 Ribosome 0.438697695752503 0.438718826209928 0.4217682 0 hPsi_site_14120 iPseU_CNN:0.4217682;iRNA_PseU:0 14121 chr2 112942829 112942829 1 + G A LGG 112942828 + 112942808 112942848 41 TGTGCCCCCAGGGGACCACATGCATCAACACCGGTGGAAGC TGTGCCCCCAGGGGACCACATACATCAACACCGGTGGAAGC < 41bp 0.525061785090017 0.885363686588687 0.2361694 0.3214813 prediction 0.720603802997341 Functional Gain - FBLN7 ENSG00000144152 CDS Human protein_coding chr2:112942828 chr2:112942829 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_20397 0 0 0 0 2 exosome 0.438783554600213 0.43862920637858 0 0 hPsi_site_14121 iPseU_CNN:0;iRNA_PseU:0 14122 chr10 43608369 43608369 1 + G A UCEC 43608368 + 43608348 43608388 41 CCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA CCCGACGGCCACTGCGATGTTATGGAGACCCAAGACATCAA < 41bp 0.525785474322412 0.886082761601389 0.34059018 0.61712354 prediction 0.720594574557953 Functional Gain - RET ENSG00000165731 CDS Human protein_coding chr10:43608368 chr10:43608369 nonsynonymous SNV 0.607 3 22 hPsi_associated_SNPs_20398 0 0 0 0 2 Cytosol 0.437770610307571 0.43780543045845 0.23424708 0 hPsi_site_14122 iPseU_CNN:0.23424708;iRNA_PseU:0 14123 chr22 41923399 41923399 1 + C T BRCA 41923400 - 41923380 41923420 41 GATCCTGGCAAAGCTCTTGGTGATGATGGCCCGGCCCCCAA GATCCTGGCAAAGCTCTTGGTAATGATGGCCCGGCCCCCAA < 41bp 0.495742533554417 0.860282399982968 0.2292341 0.3553455 prediction 0.720564799965935 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923400 chr22:41923399 synonymous SNV . 0 22 hPsi_associated_SNPs_20399 0 0 1 0 0 chromatin 0.438718593471794 0.438718592995033 0 0 hPsi_site_14123 iPseU_CNN:0;iRNA_PseU:0 14124 chr19 985912 985912 1 + G A UCEC 985911 + 985891 985931 41 CCCCGGGCCTGTCACCTGTCTGACTGCATCACCCAATGGTC CCCCGGGCCTGTCACCTGTCTAACTGCATCACCCAATGGTC < 41bp 0.472340304466353 0.860281610067166 0.310677 0.76562655 prediction 0.720563220134332 Functional Gain - WDR18 ENSG00000065268 CDS Human protein_coding chr19:985911 chr19:985912 synonymous SNV . 0 22 hPsi_associated_SNPs_20400 0 0 1 0 2 Ribosome 0.438718681084278 0.438722284221958 0.5312531 0 hPsi_site_14124 iPseU_CNN:0.5312531;iRNA_PseU:0 14125 chr19 16957837 16957837 1 + G A LGG 16957836 + 16957816 16957856 41 AGGCATGTCTGAAGAGGAGGTGTTCACCGAGGTGGCCAACC AGGCATGTCTGAAGAGGAGGTATTCACCGAGGTGGCCAACC < 41bp 0.461356066587427 0.860265491072255 0.4142339 0.7714716 prediction 0.72053098214451 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16957836 chr19:16957837 synonymous SNV . 0 22 hPsi_associated_SNPs_20401 0 0 1 0 2 Cytosol 0.438718590726965 0.438718585699646 0.5429432 0 hPsi_site_14125 iPseU_CNN:0.5429432;iRNA_PseU:0 14126 chr7 5112727 5112727 1 + G A SKCM 5112726 + 5112706 5112746 41 GCGACAGGCTCCGGGGAACATGGGGCTTTCCCTGTCCACTC GCGACAGGCTCCGGGGAACATAGGGCTTTCCCTGTCCACTC < 41bp 0.49298177393325 0.860260938753049 0.27314645 0.3167017 prediction 0.720521877506098 Functional Gain - RBAKDN ENSG00000272968 CDS Human protein_coding chr7:5112726 chr7:5112727 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_20402 0 0 0 0 0 unknown 0.438719956062784 0.438720416383757 0 0 hPsi_site_14126 iPseU_CNN:0;iRNA_PseU:0 14127 chr7 98258341 98258341 1 + G A rs114251033 98258340 + 98258320 98258360 41 TGTCTGTCCCCTTTCATGGCTGTGCAGCCGTCCCGCTGGAG TGTCTGTCCCCTTTCATGGCTATGCAGCCGTCCCGCTGGAG < 41bp 0.506370657829271 0.866618813326425 0.30951673 0.7567369 prediction 0.720496310994307 Functional Gain - NPTX2 ENSG00000106236 UTR3 Human protein_coding chr7:98258340 chr7:98258341 . . 0 22 hPsi_associated_SNPs_20403 0 0 0 0 0 exosome 0.438722651735903 0.438712848044628 0.5134738 0 hPsi_site_14127 iPseU_CNN:0.5134738;iRNA_PseU:0 14128 chr10 90537946 90537946 1 + G A UCEC 90537945 + 90537925 90537965 41 GATTTTGTCTGGGGCCTCGATGCCCCTCAACGGATGTACAG GATTTTGTCTGGGGCCTCGATACCCCTCAACGGATGTACAG < 41bp 0.497478937047006 0.860241975054545 0.1438134 0.30540404 prediction 0.72048395010909 Functional Gain - LIPN ENSG00000204020 CDS Human protein_coding chr10:90537945 chr10:90537946 nonsynonymous SNV 0.484 3 22 hPsi_associated_SNPs_20404 0 0 0 0 0 exosome 0.438731171213759 0.439067803699269 0 0 hPsi_site_14128 iPseU_CNN:0;iRNA_PseU:0 14129 chr7 99217442 99217442 1 + G A LUAD 99217441 + 99217421 99217461 41 GGAGCTCTGTCGTCGGTGGCTGAGGCCCGAGTTGCACACCA GGAGCTCTGTCGTCGGTGGCTAAGGCCCGAGTTGCACACCA < 41bp 0.494192301957198 0.860240369359613 0.29505122 0.7038194 prediction 0.720480738719227 Functional Gain - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99217441 chr7:99217442 synonymous SNV . 0 22 hPsi_associated_SNPs_20405 0 0 1 0 0 Cytosol 0.438718601021361 0.438686635762163 0.4076388 0 hPsi_site_14129 iPseU_CNN:0.4076388;iRNA_PseU:0 14130 chr1 45806750 45806750 1 + G A rs149814343 45806749 + 45806729 45806769 41 CCCTCCTAACCCCCAGGTGGTGTCAGCAAAAGCACAACATC CCCTCCTAACCCCCAGGTGGTATCAGCAAAAGCACAACATC < 41bp 0.516842846915944 0.877079660116859 0.18660256 0.6517201 prediction 0.720473626401831 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45806749 chr1:45806750 nonsynonymous SNV 0.745 0 22 hPsi_associated_SNPs_20406 0 0 0 1 1 Ribosome 0.438718593015665 0.438718593008007 0.3034402 0 hPsi_site_14130 iPseU_CNN:0.3034402;iRNA_PseU:0 14131 chr12 48723737 48723737 1 + G A SKCM 48723736 + 48723716 48723756 41 CGAGGGGCGAGGACAGGCCGTGAAGGAAGACACCACGCCGA CGAGGGGCGAGGACAGGCCGTAAAGGAAGACACCACGCCGA < 41bp 0.489248173472201 0.860236647460726 0.27331483 0.6806375 prediction 0.720473294921452 Functional Gain - H1FNT ENSG00000187166 CDS Human protein_coding chr12:48723736 chr12:48723737 synonymous SNV . 0 22 hPsi_associated_SNPs_20407 0 0 0 0 0 exosome 0.439067732894165 0.438717940443955 0.361275 0 hPsi_site_14131 iPseU_CNN:0.361275;iRNA_PseU:0 14132 chr16 29998177 29998177 1 + G A UCEC 29998176 + 29998156 29998196 41 GTACCCCAGGAGAGGAGCATTGTTGGCCAGGAGGAGGCTGG GTACCCCAGGAGAGGAGCATTATTGGCCAGGAGGAGGCTGG < 41bp 0.519526340705545 0.879737302736533 0.2539296 0.26822117 prediction 0.720421924061977 Functional Gain - TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29998176 chr16:29998177 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_20408 0 0 1 0 1 Nucleus 0.438718571786577 0.438718588715683 0 0 hPsi_site_14132 iPseU_CNN:0;iRNA_PseU:0 14133 chr14 20443896 20443896 1 + G A SKCM 20443895 + 20443875 20443915 41 CTTTCTCATCATCCTCACTGTGACCTCAGATTCCCGCCTTC CTTTCTCATCATCCTCACTGTAACCTCAGATTCCCGCCTTC < 41bp 0.49548376026403 0.860206645052392 0.19342867 0.34883356 prediction 0.720413290104783 Functional Gain - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20443895 chr14:20443896 synonymous SNV . 0 22 hPsi_associated_SNPs_20409 0 0 0 0 0 unknown 0.43871591924066 0.438712104054977 0 0 hPsi_site_14133 iPseU_CNN:0;iRNA_PseU:0 14134 chr2 15760355 15760355 1 + G A UCEC 15760354 + 15760334 15760374 41 GATTGTTTGCTCTGCCACTTTGCATTCTTTCGATGTAAAGA GATTGTTTGCTCTGCCACTTTACATTCTTTCGATGTAAAGA < 41bp 0.51613514169644 0.876333218406083 0.3105964 0.3590489 prediction 0.720396153419287 Functional Gain - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15760354 chr2:15760355 synonymous SNV . 0 22 hPsi_associated_SNPs_20410 0 0 1 0 1 Cytosol 0.438762613229101 0.438765572549014 0 0 hPsi_site_14134 iPseU_CNN:0;iRNA_PseU:0 14135 chr16 88781473 88781473 1 + G A COAD 88781472 + 88781452 88781492 41 GCAGCCCTCACTGGACCCCCTGCCGCCGTACATCCTGGCTG GCAGCCCTCACTGGACCCCCTACCGCCGTACATCCTGGCTG < 41bp 0.492760553934981 0.86019696479612 0.21215719 0.26641852 prediction 0.720393929592239 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781472 chr16:88781473 synonymous SNV . 0 22 hPsi_associated_SNPs_20411 0 0 1 0 2 Cytosol 0.438898060661576 0.439319011261575 0 0 hPsi_site_14135 iPseU_CNN:0;iRNA_PseU:0 14136 chr10 43610065 43610065 1 + G A BLCA 43610064 + 43610044 43610084 41 AAGCCACCCATCTCCTCAGCTGAGATGACCTTCCGGAGGCC AAGCCACCCATCTCCTCAGCTAAGATGACCTTCCGGAGGCC < 41bp 0.46403598226918 0.860195577823631 0.29773057 0.34102595 prediction 0.720391155647262 Functional Gain - RET ENSG00000165731 CDS Human protein_coding chr10:43610064 chr10:43610065 nonsynonymous SNV 0.444 3 22 hPsi_associated_SNPs_20412 0 0 0 0 0 Cytosol 0.438280109100069 0.438725436785429 0 0 hPsi_site_14136 iPseU_CNN:0;iRNA_PseU:0 14137 chrX 47039686 47039686 1 + G A UCEC 47039685 + 47039665 47039705 41 GACGGCAAGACCATCAATGTTGAGTTTGCCAAGGGTTCTAA GACGGCAAGACCATCAATGTTAAGTTTGCCAAGGGTTCTAA < 41bp 0.520890676833851 0.881081132479643 0.40865707 0.54745364 prediction 0.720380911291584 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47039685 chrX:47039686 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20413 0 0 1 0 2 Ribosome 0.438680408863836 0.439310374790534 0.0949072799999999 0 hPsi_site_14137 iPseU_CNN:0.0949072799999999;iRNA_PseU:0 14138 chr3 51669684 51669684 1 + G A COAD 51669683 + 51669663 51669703 41 GCTGCTGATGGGGTACGAGATGTACAGACTCCTCACTCTGA GCTGCTGATGGGGTACGAGATATACAGACTCCTCACTCTGA < 41bp 0.509563961144432 0.869751470657431 0.30799276 0.6261666 prediction 0.720375019025998 Functional Gain - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51669683 chr3:51669684 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20414 0 0 1 0 1 chromatin 0.438158029892072 0.439346510236146 0.2523332 0 hPsi_site_14138 iPseU_CNN:0.2523332;iRNA_PseU:0 14139 chr5 424043 424043 1 + G A LUAD 424042 + 424022 424062 41 ACTCGGCCTTCCTGACCCGCTGCTTCATCTGCCGTGTGCGC ACTCGGCCTTCCTGACCCGCTACTTCATCTGCCGTGTGCGC < 41bp 0.468860133976066 0.860184284447931 0.31079257 0.62286323 prediction 0.720368568895863 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:424042 chr5:424043 nonsynonymous SNV 0.920 4 22 hPsi_associated_SNPs_20415 0 0 0 0 2 chromatin 0.438717642753091 0.438718943463003 0.24572646 0 hPsi_site_14139 iPseU_CNN:0.24572646;iRNA_PseU:0 14140 chr22 24581693 24581693 1 + G A BLCA 24581692 + 24581672 24581712 41 GGGACGCAGCTCCTGACAGCTGACTCCAGCGGCGGCAGCAC GGGACGCAGCTCCTGACAGCTAACTCCAGCGGCGGCAGCAC < 41bp 0.523361540187054 0.883545420079918 0.16794723 0.26267147 prediction 0.720367759785728 Functional Gain - SUSD2 ENSG00000099994 CDS Human protein_coding chr22:24581692 chr22:24581693 nonsynonymous SNV 0.039 4 22 hPsi_associated_SNPs_20416 0 0 1 0 1 Exosome 0.438789362935864 0.438686359197504 0 0 hPsi_site_14140 iPseU_CNN:0;iRNA_PseU:0 14141 chr2 234255520 234255520 1 + G A CESC 234255519 + 234255499 234255539 41 CTGAAAGATGCAGGAGAAGCTGAGGAGGGGAAGAGAGACAA CTGAAAGATGCAGGAGAAGCTAAGGAGGGGAAGAGAGACAA < 41bp 0.501654488354714 0.861823564659478 0.23703715 0.2874652 prediction 0.720338152609527 Functional Gain - SAG ENSG00000130561 CDS Human protein_coding chr2:234255519 chr2:234255520 nonsynonymous SNV 0.074 1 22 hPsi_associated_SNPs_20417 0 0 0 0 1 Endoplasmic reticulum 0.438718527154256 0.438718596542963 0 0 hPsi_site_14141 iPseU_CNN:0;iRNA_PseU:0 14142 chrX 11790293 11790293 1 + G A GBM 11790292 + 11790272 11790312 41 CAGGTCCTCTCCTGGAAGCTTGTGCCTGACAATTACCCCCC CAGGTCCTCTCCTGGAAGCTTATGCCTGACAATTACCCCCC < 41bp 0.493460371142091 0.860167203391994 0.22854134 0.28872567 prediction 0.720334406783989 Functional Gain - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11790292 chrX:11790293 nonsynonymous SNV 0.880 0 22 hPsi_associated_SNPs_20418 0 0 0 0 2 Cytosol 0.438719760321747 0.438715034663373 0 0 hPsi_site_14142 iPseU_CNN:0;iRNA_PseU:0 14143 chr1 45973168 45973168 1 + G A TGCT 45973167 + 45973147 45973187 41 GCAGAGCTGCCACCTCCGAATGCTGACTGACCCAGTGGACC GCAGAGCTGCCACCTCCGAATACTGACTGACCCAGTGGACC < 41bp 0.520408665103683 0.880573770232604 0.24169213 0.59086037 prediction 0.720330210257841 Functional Gain - MMACHC ENSG00000132763 CDS Human protein_coding chr1:45973167 chr1:45973168 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_20419 0 0 1 0 1 Cytosol 0.438716382989008 0.438711746495336 0.18172074 0 hPsi_site_14143 iPseU_CNN:0.18172074;iRNA_PseU:0 14144 chr14 62207553 62207553 1 + G A rs34005929 62207552 + 62207532 62207572 41 GTTACGTTCCTTCGATCAGTTGTCACCATTAGAAAGCAGTT GTTACGTTCCTTCGATCAGTTATCACCATTAGAAAGCAGTT < 41bp 0.519722127508908 0.879885793418949 0.2481362 0.5076166 prediction 0.720327331820082 Functional Gain - HIF1A ENSG00000100644 CDS Human protein_coding chr14:62207552 chr14:62207553 synonymous SNV . 0 22 hPsi_associated_SNPs_20420 0 0 1 0 1 Cytosol 0.438718648972234 0.438718553268729 0.0152331999999999 0 hPsi_site_14144 iPseU_CNN:0.0152331999999999;iRNA_PseU:0 14145 chr3 100387842 100387842 1 + G A GBM 100387841 + 100387821 100387861 41 ATTGTTAGCACATTATCTGTTGCAGTTGTTTTTGGAATTAC ATTGTTAGCACATTATCTGTTACAGTTGTTTTTGGAATTAC < 41bp 0.505418248046542 0.865566344488251 0.25770387 0.4381054 prediction 0.720296192883419 Functional Gain - ADGRG7 ENSG00000144820 CDS Human protein_coding chr3:100387841 chr3:100387842 nonsynonymous SNV 0.966 0 22 hPsi_associated_SNPs_20421 0 0 0 0 1 exosome 0.438718855158059 0.438718755636498 0 0 hPsi_site_14145 iPseU_CNN:0;iRNA_PseU:0 14146 chr5 458132 458132 1 + G A COAD 458131 + 458111 458151 41 CAGACCACACTCCCTGCCATTGTCTTCCAGGTACCACCTGC CAGACCACACTCCCTGCCATTATCTTCCAGGTACCACCTGC < 41bp 0.480438032521086 0.860136093404476 0.23499286 0.30878738 prediction 0.720272186808951 Functional Gain - EXOC3 ENSG00000180104 CDS Human protein_coding chr5:458131 chr5:458132 nonsynonymous SNV 0.846 1 22 hPsi_associated_SNPs_20422 0 0 1 0 1 Ribosome 0.438718652687653 0.438718637105471 0 0 hPsi_site_14146 iPseU_CNN:0;iRNA_PseU:0 14147 chr8 28574717 28574717 1 + G A UCEC 28574716 + 28574696 28574736 41 GACTACGATGACCGGATCATTGCCACCCTGAAGGCGGTGCA GACTACGATGACCGGATCATTACCACCCTGAAGGCGGTGCA < 41bp 0.477119047033186 0.860134600147228 0.30983713 0.37757808 prediction 0.720269200294456 Functional Gain - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574716 chr8:28574717 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20423 0 0 1 0 0 Endoplasmic reticulum 0.438536290807241 0.438217695202559 0 0 hPsi_site_14147 iPseU_CNN:0;iRNA_PseU:0 14148 chr20 44642386 44642386 1 + G A BLCA 44642385 + 44642365 44642405 41 GCCCGCGCTGCCCCGCAAGCTGGACTCGGTCTTTGAGGAGC GCCCGCGCTGCCCCGCAAGCTAGACTCGGTCTTTGAGGAGC < 41bp 0.469651785541801 0.860128846591954 0.27791777 0.7712736 prediction 0.720257693183908 Functional Gain - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44642385 chr20:44642386 synonymous SNV . 0 22 hPsi_associated_SNPs_20424 0 0 0 0 2 Endoplasmic reticulum 0.438718748872138 0.438718592484964 0.5425472 0 hPsi_site_14148 iPseU_CNN:0.5425472;iRNA_PseU:0 14149 chr17 74936499 74936499 1 + G A COAD 74936498 + 74936478 74936518 41 CTGCAGCTCTTCATCGGGTTTGGCTTCCCCTACGAGGGCCC CTGCAGCTCTTCATCGGGTTTAGCTTCCCCTACGAGGGCCC < 41bp 0.473103944647942 0.860127547334128 0.51780623 0.78883064 prediction 0.720255094668257 Functional Gain - MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74936498 chr17:74936499 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_20425 0 0 0 0 1 exosome 0.438718327311882 0.438816269375307 0.54204882 0 hPsi_site_14149 iPseU_CNN:0.54204882;iRNA_PseU:0 14150 chr2 177036561 177036561 1 + G A COAD 177036560 + 177036540 177036580 41 CGTGGCCTACTCCGGCCAGCTGCCGCCAGTGCCCGGCCTGG CGTGGCCTACTCCGGCCAGCTACCGCCAGTGCCCGGCCTGG < 41bp 0.504169581279619 0.864289237825957 0.27272832 0.6388425 prediction 0.720239313092677 Functional Gain - HOXD3 ENSG00000128652 CDS Human protein_coding chr2:177036560 chr2:177036561 synonymous SNV . 0 22 hPsi_associated_SNPs_20426 0 0 0 0 0 exosome 0.438728493390245 0.440118058772375 0.277685 0 hPsi_site_14150 iPseU_CNN:0.277685;iRNA_PseU:0 14151 chr9 99212630 99212630 1 + G A rs144856432 99212629 + 99212609 99212649 41 GCAGGAGAGTTTCGGCTGCGTGGTGGCCAACCGCTTCCATC GCAGGAGAGTTTCGGCTGCGTAGTGGCCAACCGCTTCCATC < 41bp 0.490809468873334 0.860097296304006 0.19477963 0.3958856 prediction 0.720194592608012 Functional Gain - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99212629 chr9:99212630 synonymous SNV . 0 22 hPsi_associated_SNPs_20427 0 0 1 0 0 chromatin 0.438510447132317 0.442005055834306 0 0 hPsi_site_14151 iPseU_CNN:0;iRNA_PseU:0 14152 chr9 130575853 130575853 1 + G A LUSC 130575852 + 130575832 130575872 41 GCACCTGGTGGGTGGTGTCCTGAAGCTGCTGGAGCCCGCAC GCACCTGGTGGGTGGTGTCCTAAAGCTGCTGGAGCCCGCAC < 41bp 0.506359302820066 0.866447541697636 0.19562477 0.33166808 prediction 0.720176477755139 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130575852 chr9:130575853 synonymous SNV . 0 22 hPsi_associated_SNPs_20428 0 0 1 0 0 Cytosol 0.438335196062568 0.438699132339994 0 0 hPsi_site_14152 iPseU_CNN:0;iRNA_PseU:0 14153 chr13 37007310 37007310 1 + G A GBM 37007309 + 37007289 37007329 41 GGATCCCCCGCAGAGGACAGTGCTAGGGCTGCTAACTGCAA GGATCCCCCGCAGAGGACAGTACTAGGGCTGCTAACTGCAA < 41bp 0.522390399884304 0.882469957963647 0.27643588 0.34495336 prediction 0.720159116158685 Functional Gain - CCNA1 ENSG00000133101 CDS Human protein_coding chr13:37007309 chr13:37007310 synonymous SNV . 0 22 hPsi_associated_SNPs_20429 0 0 0 0 1 exosome 0.438718592995142 0.43871859303922 0 0 hPsi_site_14153 iPseU_CNN:0;iRNA_PseU:0 14154 chr22 50987878 50987878 1 + G A SKCM 50987877 + 50987857 50987897 41 ACGACCCGCGAACAGACGCCTGGACCCCACGCGCGCCACTC ACGACCCGCGAACAGACGCCTAGACCCCACGCGCGCCACTC < 41bp 0.482535353496037 0.860078432091275 0.34988987 0.60345924 prediction 0.720156864182551 Functional Gain - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987877 chr22:50987878 stopgain 0.398 0 22 hPsi_associated_SNPs_20430 0 0 1 0 0 nucleolus 0.438716017081593 0.438741632390816 0.20691848 0 hPsi_site_14154 iPseU_CNN:0.20691848;iRNA_PseU:0 14155 chr9 131122671 131122671 1 + G A BLCA 131122670 + 131122650 131122690 41 GGGCTTTGACCCGGCTATTGTGAAAGACCCGCTGTTCTATC GGGCTTTGACCCGGCTATTGTAAAAGACCCGCTGTTCTATC < 41bp 0.486745850308875 0.860064678577528 0.39794302 0.7162756 prediction 0.720129357155056 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131122670 chr9:131122671 synonymous SNV . 0 22 hPsi_associated_SNPs_20431 0 0 0 0 1 Ribosome 0.438718592933864 0.438718592994736 0.4325512 0 hPsi_site_14155 iPseU_CNN:0.4325512;iRNA_PseU:0 14156 chr4 1809191 1809191 1 + G A rs3135902 1809190 + 1809170 1809210 41 GTGCGCATCTTGCCTCCAGGTGCAGAGGTACCCTGGGTGTC GTGCGCATCTTGCCTCCAGGTACAGAGGTACCCTGGGTGTC < 41bp 0.501036523447296 0.861090389298387 0.28314468 0.7588713 prediction 0.720107731702182 Functional Gain - FGFR3 ENSG00000068078 UTR3 Human protein_coding chr4:1809190 chr4:1809191 . . 0 22 hPsi_associated_SNPs_20432 0 0 1 0 0 Ribosome 0.438719489280828 0.438728980393605 0.5177426 0 hPsi_site_14156 iPseU_CNN:0.5177426;iRNA_PseU:0 14157 chr5 120022076 120022076 1 + G A UCEC 120022075 + 120022055 120022095 41 ATAGACCTGAAAAAGACAGATGTCCCCAGGCAGGGCCTCGA ATAGACCTGAAAAAGACAGATATCCCCAGGCAGGGCCTCGA < 41bp 0.503726446115696 0.863770323851833 0.268561 0.35658717 prediction 0.720087755472274 Functional Gain - PRR16 ENSG00000184838 CDS Human protein_coding chr5:120022075 chr5:120022076 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_20433 0 0 0 0 0 Cytosol 0.438718567930631 0.438719648297271 0 0 hPsi_site_14157 iPseU_CNN:0;iRNA_PseU:0 14158 chr19 5456451 5456451 1 + G A SKCM 5456450 + 5456430 5456470 41 GCCATCTGCCTGGATGAGTATGAGGAGGGCGACCAACTCAA GCCATCTGCCTGGATGAGTATAAGGAGGGCGACCAACTCAA < 41bp 0.499073804250548 0.860031355739137 0.41972414 0.6931241 prediction 0.720062711478274 Functional Gain - ZNRF4 ENSG00000105428 CDS Human protein_coding chr19:5456450 chr19:5456451 nonsynonymous SNV 0.479 0 22 hPsi_associated_SNPs_20434 0 0 0 0 0 unknown 0.438718599057818 0.438718593001041 0.3862482 0 hPsi_site_14158 iPseU_CNN:0.3862482;iRNA_PseU:0 14159 chr19 52272360 52272360 1 + G A SKCM 52272359 + 52272339 52272379 41 TGAAGGTGATCGTCGGACCTTGGATTCTTGCTCTAGTCCTT TGAAGGTGATCGTCGGACCTTAGATTCTTGCTCTAGTCCTT < 41bp 0.519228052946882 0.879255221265189 0.4024059 0.6820764 prediction 0.720054336636614 Functional Gain - FPR2 ENSG00000171049 CDS Human protein_coding chr19:52272359 chr19:52272360 stopgain 0.748 0 22 hPsi_associated_SNPs_20435 0 0 0 0 0 exosome 0.438718591229749 0.438722283300252 0.3641528 0 hPsi_site_14159 iPseU_CNN:0.3641528;iRNA_PseU:0 14160 chr11 34489885 34489885 1 + G A STAD 34489884 + 34489864 34489904 41 TGAGGAACAGAGGAAACGTCTGTGTGAGAACATTGCCGGCC TGAGGAACAGAGGAAACGTCTATGTGAGAACATTGCCGGCC < 41bp 0.468646046631117 0.860022015161915 0.46164122 0.6497103 prediction 0.720044030323831 Functional Gain - CAT ENSG00000121691 CDS Human protein_coding chr11:34489884 chr11:34489885 synonymous SNV . 0 22 hPsi_associated_SNPs_20436 0 0 1 0 2 Ribosome 0.43890000770126 0.439153010459912 0.2994206 0 hPsi_site_14160 iPseU_CNN:0.2994206;iRNA_PseU:0 14161 chr17 47895239 47895239 1 + G A HNSC 47895238 + 47895218 47895258 41 AGCAACATGATTAAAACAATTGCTTTTGGCCGCTATGAGCT AGCAACATGATTAAAACAATTACTTTTGGCCGCTATGAGCT < 41bp 0.513371120866911 0.873372847163365 0.20373794 0.61171865 prediction 0.720003452592909 Functional Gain - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47895238 chr17:47895239 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20437 0 0 1 0 1 Cytosol 0.438718652162757 0.438719686370737 0.2234373 0 hPsi_site_14161 iPseU_CNN:0.2234373;iRNA_PseU:0 14162 chr2 160605023 160605023 1 + G A LUAD 160605022 + 160605002 160605042 41 AGGAGGCGAGAGGGAAGAGATGAATCTTCAAGGATACCTAC AGGAGGCGAGAGGGAAGAGATAAATCTTCAAGGATACCTAC < 41bp 0.508962978642315 0.868961918889828 0.48047256 0.56671685 prediction 0.719997880495026 Functional Gain - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160605022 chr2:160605023 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20438 0 0 1 5 0 Cytosol 0.438718613182112 0.438762557606206 0.1334337 0 hPsi_site_14162 iPseU_CNN:0.1334337;iRNA_PseU:0 14163 chr10 90697976 90697976 1 + C T SKCM 90697977 - 90697957 90697997 41 ATGGAGTCTGCTGGCATCCATGAAACCACCTACAACAGCAT ATGGAGTCTGCTGGCATCCATAAAACCACCTACAACAGCAT < 41bp 0.473872643769785 0.859987894257103 0.21293321 0.2561378 prediction 0.719975788514206 Functional Gain - ACTA2 ENSG00000107796 CDS Human protein_coding chr10:90697977 chr10:90697976 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_20439 0 0 0 0 1 Ribosome 0.438718587771874 0.438718121907574 0 0 hPsi_site_14163 iPseU_CNN:0;iRNA_PseU:0 14164 chr3 142840270 142840270 1 + G A COAD 142840269 + 142840249 142840289 41 GTGGCATGTATGGCAAAAACTGTATCCGGGGGACGCCGTTT GTGGCATGTATGGCAAAAACTATATCCGGGGGACGCCGTTT < 41bp 0.475501013694154 0.859970382756784 0.20168078 0.27011535 prediction 0.719940765513568 Functional Gain - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840269 chr3:142840270 synonymous SNV . 0 22 hPsi_associated_SNPs_20440 0 0 1 0 0 cytosol 0.438718592995102 0.438718592995102 0 0 hPsi_site_14164 iPseU_CNN:0;iRNA_PseU:0 14165 chr1 87045161 87045161 1 + G A PRAD 87045160 + 87045140 87045180 41 ACAAGTCCCAAGCCTTCCCTTGCCTGACCAATACCCACCAA ACAAGTCCCAAGCCTTCCCTTACCTGACCAATACCCACCAA < 41bp 0.482288908658539 0.859954782620445 0.28107786 0.7048278 prediction 0.719909565240889 Functional Gain - CLCA4 ENSG00000016602 CDS Human protein_coding chr1:87045160 chr1:87045161 synonymous SNV . 0 22 hPsi_associated_SNPs_20441 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.4096556 0 hPsi_site_14165 iPseU_CNN:0.4096556;iRNA_PseU:0 14166 chr1 13743021 13743021 1 + G A SKCM 13743020 + 13743000 13743040 41 CCTTCCTCTGGGGTCTCTGATGAAAAGGCCTTGCCCAGAGA CCTTCCTCTGGGGTCTCTGATAAAAAGGCCTTGCCCAGAGA < 41bp 0.481636625023191 0.859954292528682 0.3294899 0.35422596 prediction 0.719908585057365 Functional Gain - PRAMEF20 ENSG00000204478 CDS Human protein_coding chr1:13743020 chr1:13743021 nonsynonymous SNV 0.121 0 22 hPsi_associated_SNPs_20442 0 0 0 0 1 unknown 0.438718400239591 0.438718592991091 0 0 hPsi_site_14166 iPseU_CNN:0;iRNA_PseU:0 14167 chr20 49576326 49576326 1 + G A rs566811112 49576325 + 49576305 49576345 41 TGCTGGACTATGAAGCCTTCTGTGGCTCCTCAGCCACTGAT TGCTGGACTATGAAGCCTTCTATGGCTCCTCAGCCACTGAT < 41bp 0.512447897370573 0.872401985304786 0.327149 0.5386329 prediction 0.719908175868425 Functional Gain - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576325 chr20:49576326 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20443 0 0 1 0 0 Nucleus 0.438720353140611 0.438719348264129 0.0772657999999999 0 hPsi_site_14167 iPseU_CNN:0.0772657999999999;iRNA_PseU:0 14168 chr15 32935855 32935855 1 + G A COAD 32935854 + 32935834 32935874 41 TGTTTTGGCTGGCATCTGGATGGACTCCAGCATTTGCTTAC TGTTTTGGCTGGCATCTGGATAGACTCCAGCATTTGCTTAC < 41bp 0.467400913791439 0.859953282303192 0.3667403 0.8952137 prediction 0.719906564606384 Functional Gain - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32935854 chr15:32935855 stopgain 0.802 0 22 hPsi_associated_SNPs_20444 0 0 1 0 1 cytosol 0.439301595638308 0.439893311126875 0.7904274 0 hPsi_site_14168 iPseU_CNN:0.7904274;iRNA_PseU:0 14169 chr11 111895560 111895560 1 + G A rs114863504 111895559 + 111895539 111895579 41 CAAACCTGAAACGAAATCTTTGCAACCAGTACAGCCTGCGC CAAACCTGAAACGAAATCTTTACAACCAGTACAGCCTGCGC < 41bp 0.496704716249719 0.859952699145355 0.42155463 0.7328921 prediction 0.71990539829071 Functional Gain - DLAT ENSG00000150768 UTR5 Human protein_coding chr11:111895559 chr11:111895560 . . 0 22 hPsi_associated_SNPs_20445 1 0 0 0 0 Cytosol 0.438717489522498 0.438718592743178 0.4657842 0 hPsi_site_14169 iPseU_CNN:0.4657842;iRNA_PseU:0 14170 chr20 45354077 45354077 1 + G A UCEC 45354076 + 45354056 45354096 41 GGGGCCACGGCAGCGGGGAGTGCTGGTGTCCCTCTATGAGG GGGGCCACGGCAGCGGGGAGTACTGGTGTCCCTCTATGAGG < 41bp 0.469543991086981 0.859947683649813 0.24498433 0.3058931 prediction 0.719895367299626 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45354076 chr20:45354077 synonymous SNV . 0 22 hPsi_associated_SNPs_20446 0 0 0 0 0 Nucleus 0.438718489025885 0.438718616678676 0 0 hPsi_site_14170 iPseU_CNN:0;iRNA_PseU:0 14171 chr16 74425611 74425611 1 + G A PRAD 74425610 + 74425590 74425630 41 TGGATGATAATCTGAAGGACTGTCTCTTTGTCCCTCTTCCA TGGATGATAATCTGAAGGACTATCTCTTTGTCCCTCTTCCA < 41bp 0.500574545908206 0.860521265936772 0.30743027 0.5674445 prediction 0.719893440057132 Functional Gain - NPIPB15 ENSG00000196436 CDS Human protein_coding chr16:74425610 chr16:74425611 nonsynonymous SNV 0.009 3 22 hPsi_associated_SNPs_20447 0 0 1 0 0 Endoplasmic reticulum 0.438717119594807 0.438717475796205 0.134889 0 hPsi_site_14171 iPseU_CNN:0.134889;iRNA_PseU:0 14172 chr4 56284135 56284135 1 + G A PRAD 56284134 + 56284114 56284154 41 CGCTCTCAACTAACTACAATTGTATTGGCAGCTAGAGAGGT CGCTCTCAACTAACTACAATTATATTGGCAGCTAGAGAGGT < 41bp 0.508923906017754 0.868870495478376 0.18988642 0.26131457 prediction 0.719893178921245 Functional Gain - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56284134 chr4:56284135 nonsynonymous SNV 0.458 2 22 hPsi_associated_SNPs_20448 0 0 1 0 1 Ribosome 0.438702328973913 0.43871614848729 0 0 hPsi_site_14172 iPseU_CNN:0;iRNA_PseU:0 14173 chr19 16178531 16178531 1 + G A ESCA 16178530 + 16178510 16178550 41 GAGGCGGATAAGAAAGCCGCTGAGGACAAGTGCAAGCAGGT GAGGCGGATAAGAAAGCCGCTAAGGACAAGTGCAAGCAGGT < 41bp 0.505258998868606 0.865197683176886 0.1964753 0.28254604 prediction 0.71987736861656 Functional Gain - TPM4 ENSG00000167460 CDS Human protein_coding chr19:16178530 chr19:16178531 nonsynonymous SNV 0.306 2 22 hPsi_associated_SNPs_20449 0 0 0 0 1 Ribosome 0.438718589658058 0.438724486570208 0 0 hPsi_site_14173 iPseU_CNN:0;iRNA_PseU:0 14174 chr2 220472842 220472842 1 + G A UCEC 220472841 + 220472821 220472861 41 ACGGTTCGGCCGCAACTGGCTGCAGTACAGGAGTCACCTGG ACGGTTCGGCCGCAACTGGCTACAGTACAGGAGTCACCTGG < 41bp 0.47149578997259 0.85990439319603 0.37995258 0.7021667 prediction 0.719808786392059 Functional Gain - STK11IP ENSG00000144589 CDS Human protein_coding chr2:220472841 chr2:220472842 synonymous SNV . 0 22 hPsi_associated_SNPs_20450 0 0 0 0 1 chromatin 0.438720862807045 0.43872027681 0.4043334 0 hPsi_site_14174 iPseU_CNN:0.4043334;iRNA_PseU:0 14175 chr17 79207236 79207236 1 + G A rs56161914 79207235 + 79207215 79207255 41 AGGCCCTCCCCACTCACCCGTGCGGCCGTGTTCCTTGCTGT AGGCCCTCCCCACTCACCCGTACGGCCGTGTTCCTTGCTGT < 41bp 0.502643060282817 0.86254708922303 0.36425143 0.6348117 prediction 0.719808057880426 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79207235 chr17:79207236 synonymous SNV . 0 22 hPsi_associated_SNPs_20451 0 0 0 0 0 chromatin 0.438730950016227 0.440116682480772 0.2696234 0 hPsi_site_14175 iPseU_CNN:0.2696234;iRNA_PseU:0 14176 chr3 51980236 51980236 1 + G A rs76343500 51980235 + 51980215 51980255 41 AATCGGAAGCTGCTGTGGCATGGCACCAACATGGCCGTGGT AATCGGAAGCTGCTGTGGCATAGCACCAACATGGCCGTGGT < 41bp 0.518285661962196 0.878189088750543 0.22075105 0.28268784 prediction 0.719806853576693 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51980235 chr3:51980236 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_20452 0 0 0 0 1 nucleus 0.438070763080212 0.438718740951159 0 0 hPsi_site_14176 iPseU_CNN:0;iRNA_PseU:0 14177 chr11 57572182 57572182 1 + G A LUAD 57572181 + 57572161 57572201 41 CTCGCCGGAAACTTCGGGAATGTGATGGTTTAGTTGATGCC CTCGCCGGAAACTTCGGGAATATGATGGTTTAGTTGATGCC < 41bp 0.516945461614261 0.876848800702795 0.3334208 0.3711838 prediction 0.719806678177067 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57572181 chr11:57572182 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20453 0 0 1 0 2 Nucleus 0.438740757489795 0.438718585274063 0 0 hPsi_site_14177 iPseU_CNN:0;iRNA_PseU:0 14178 chr6 57048731 57048731 1 + G A SKCM 57048730 + 57048710 57048750 41 GTGGTCAATAAGTTTCTGGATGATTTGGGAAATGCCAAGAG GTGGTCAATAAGTTTCTGGATAATTTGGGAAATGCCAAGAG < 41bp 0.488150656926957 0.859901465444502 0.21169734 0.23714676 prediction 0.719802930889005 Functional Gain - BAG2 ENSG00000112208 CDS Human protein_coding chr6:57048730 chr6:57048731 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20454 0 0 1 0 0 Ribosome 0.438723522606808 0.438718595853233 0 0 hPsi_site_14178 iPseU_CNN:0;iRNA_PseU:0 14179 chr15 91438717 91438717 1 + G A LUSC 91438716 + 91438696 91438736 41 ATGGAGCAGTGCTGGGCCTATGAGCCTGGGCAGCGGCCCAG ATGGAGCAGTGCTGGGCCTATAAGCCTGGGCAGCGGCCCAG < 41bp 0.512564701788145 0.872461789371963 0.24912366 0.44610518 prediction 0.719794175167637 Functional Gain - FES ENSG00000182511 CDS Human protein_coding chr15:91438716 chr15:91438717 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_20455 0 0 0 0 1 cytosol 0.438718689784511 0.438718909590143 0 0 hPsi_site_14179 iPseU_CNN:0;iRNA_PseU:0 14180 chr19 14070110 14070110 1 + G A SARC 14070109 + 14070089 14070129 41 TGAGGAAGCCCGGCCTGCCCTGTGCCCAGGACCCTCTGGCA TGAGGAAGCCCGGCCTGCCCTATGCCCAGGACCCTCTGGCA < 41bp 0.470513604099342 0.859896367343711 0.2555687 0.59761953 prediction 0.719792734687422 Functional Gain - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14070109 chr19:14070110 synonymous SNV . 0 22 hPsi_associated_SNPs_20456 0 0 1 0 0 Cytosol 0.438718593034119 0.438718592991787 0.19523906 0 hPsi_site_14180 iPseU_CNN:0.19523906;iRNA_PseU:0 14181 chr9 139310781 139310781 1 + G A SKCM 139310780 + 139310760 139310800 41 ACGCGGATGGCGGTCCAGTTTGAGCTGGAGGACCTGAACCT ACGCGGATGGCGGTCCAGTTTAAGCTGGAGGACCTGAACCT < 41bp 0.491416627333595 0.85987825201531 0.32011405 0.38467544 prediction 0.71975650403062 Functional Gain - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139310780 chr9:139310781 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_20457 0 0 1 1 2 Cytosol 0.438719638790637 0.438719749311423 0 0 hPsi_site_14181 iPseU_CNN:0;iRNA_PseU:0 14182 chr19 42822020 42822020 1 + G A UCEC 42822019 + 42821999 42822039 41 TTTTATGTGCCCTTCTTTGCTGCCTATACCCTCTGGTGAGA TTTTATGTGCCCTTCTTTGCTACCTATACCCTCTGGTGAGA < 41bp 0.477149331586449 0.859870230788204 0.20067075 0.5718023 prediction 0.719740461576408 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42822019 chr19:42822020 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_20458 0 0 0 0 1 nucleoplasm 0.438808639886011 0.439390611366108 0.1436046 0 hPsi_site_14182 iPseU_CNN:0.1436046;iRNA_PseU:0 14183 chr17 81052065 81052065 1 + G A STAD 81052064 + 81052044 81052084 41 GCAGGACTCAGCCATCCACCTGCGCGTGAGCAGACTCTATC GCAGGACTCAGCCATCCACCTACGCGTGAGCAGACTCTATC < 41bp 0.484944084213772 0.859863059454393 0.11856535 0.2732343 prediction 0.719726118908785 Functional Gain - METRNL ENSG00000176845 CDS Human protein_coding chr17:81052064 chr17:81052065 synonymous SNV . 0 22 hPsi_associated_SNPs_20459 0 0 0 0 1 Ribosome 0.438993571411551 0.438481483373268 0 0 hPsi_site_14183 iPseU_CNN:0;iRNA_PseU:0 14184 chr3 195955749 195955749 1 + G A SKCM 195955748 + 195955728 195955768 41 GAAGATAACGCTGACCCTGGTGGGCCTGTTTCTCGTCCCCG GAAGATAACGCTGACCCTGGTAGGCCTGTTTCTCGTCCCCG < 41bp 0.46080951397499 0.859862561254769 0.2699659 0.4953335 prediction 0.719725122509538 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955748 chr3:195955749 synonymous SNV . 0 22 hPsi_associated_SNPs_20460 0 0 1 0 2 exosome 0.438718593055783 0.4387185929951 0 0 hPsi_site_14184 iPseU_CNN:0;iRNA_PseU:0 14185 chr19 54621686 54621686 1 + G A LUSC 54621685 + 54621665 54621705 41 CTGGCAGATGAGCTCTTAGCTGATCTCGAAGAGGCAGCAGA CTGGCAGATGAGCTCTTAGCTAATCTCGAAGAGGCAGCAGA < 41bp 0.475752448485452 0.859853820360489 0.4428202 0.74117494 prediction 0.719707640720978 Functional Gain - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54621685 chr19:54621686 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_20461 0 0 1 0 1 Cytosol 0.438735691597831 0.438718172300816 0.48234988 0 hPsi_site_14185 iPseU_CNN:0.48234988;iRNA_PseU:0 14186 chr20 56140810 56140810 1 + G A SKCM 56140809 + 56140789 56140829 41 GTCAATGCCGACCTCCCCTGTGAAATCGAGAGAGAGATCCT GTCAATGCCGACCTCCCCTGTAAAATCGAGAGAGAGATCCT < 41bp 0.481210501830765 0.859838542247054 0.29573268 0.34368348 prediction 0.719677084494109 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140809 chr20:56140810 nonsynonymous SNV 0.519 1 22 hPsi_associated_SNPs_20462 0 0 1 0 0 exosome 0.446046147065138 0.438678921918526 0 0 hPsi_site_14186 iPseU_CNN:0;iRNA_PseU:0 14187 chr14 101350846 101350846 1 + C T SKCM 101350847 - 101350827 101350867 41 GAAATAGAGGATCCACCCAATGACCTACTCCAAGACCTGGA GAAATAGAGGATCCACCCAATAACCTACTCCAAGACCTGGA < 41bp 0.509055368378904 0.868892457992794 0.24528036 0.2790197 prediction 0.719674179227779 Functional Gain - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101350847 chr14:101350846 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20463 0 0 0 0 0 exosome 0.438718592995105 0.438718592995102 0 0 hPsi_site_14187 iPseU_CNN:0;iRNA_PseU:0 14188 chr3 51749095 51749095 1 + G A SKCM 51749094 + 51749074 51749114 41 CTAGCCCCCTTTCGCCCAGCTGACACCCACAATGAGGTCCG CTAGCCCCCTTTCGCCCAGCTAACACCCACAATGAGGTCCG < 41bp 0.479069403340328 0.859831233153333 0.08112082 0.16224533 prediction 0.719662466306666 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51749094 chr3:51749095 nonsynonymous SNV 0.755 2 22 hPsi_associated_SNPs_20464 0 0 0 0 1 Endoplasmic reticulum 0.438865721808972 0.438718593192709 0 0 hPsi_site_14188 iPseU_CNN:0;iRNA_PseU:0 14189 chr3 46307064 46307064 1 + G A rs145141172 46307063 + 46307043 46307083 41 TACCTGGCCATTGTCCATGCTGTGTTTGCCCTTCGAGCCCG TACCTGGCCATTGTCCATGCTATGTTTGCCCTTCGAGCCCG < 41bp 0.521974645660828 0.881804626064997 0.24475795 0.30016172 prediction 0.719659960808338 Functional Gain - CCR3 ENSG00000183625 CDS Human protein_coding chr3:46307063 chr3:46307064 nonsynonymous SNV 0.883 3 22 hPsi_associated_SNPs_20465 0 0 0 0 0 exosome 0.438582129120401 0.438294943120106 0 0 hPsi_site_14189 iPseU_CNN:0;iRNA_PseU:0 14190 chr3 17056268 17056268 1 + G A SKCM 17056267 + 17056247 17056287 41 CAATCTCATGCAGTGCATGTTGGCGGTGTCTCCCCGCTTTC CAATCTCATGCAGTGCATGTTAGCGGTGTCTCCCCGCTTTC < 41bp 0.4740233689903 0.859815966879922 0.17552999 0.32301494 prediction 0.719631933759845 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17056267 chr3:17056268 synonymous SNV . 0 22 hPsi_associated_SNPs_20466 0 0 0 0 1 nucleus 0.437540133742792 0.438833943082323 0 0 hPsi_site_14190 iPseU_CNN:0;iRNA_PseU:0 14191 chr16 67322302 67322302 1 + G A rs553521262 67322301 + 67322281 67322321 41 GCTGGGCGGCCAGCCCTCTTTGAGTATGTCTGGGCCTAGCC GCTGGGCGGCCAGCCCTCTTTAAGTATGTCTGGGCCTAGCC < 41bp 0.479966418261352 0.85980964991365 0.34270644 0.60351026 prediction 0.7196192998273 Functional Gain - PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67322301 chr16:67322302 synonymous SNV . 0 22 hPsi_associated_SNPs_20467 0 0 1 0 1 Cytosol 0.438718589106468 0.438722908786454 0.20702052 0 hPsi_site_14191 iPseU_CNN:0.20702052;iRNA_PseU:0 14192 chr22 44586453 44586453 1 + G A UCEC 44586452 + 44586432 44586472 41 CATCTTCAACAAGGACCTGTTGTCTACCCTGCACCTCCTTG CATCTTCAACAAGGACCTGTTATCTACCCTGCACCTCCTTG < 41bp 0.459958667286718 0.859807356108974 0.7044132 0.83956915 prediction 0.719614712217947 Functional Gain - PARVG ENSG00000138964 CDS Human protein_coding chr22:44586452 chr22:44586453 synonymous SNV . 0 22 hPsi_associated_SNPs_20468 0 0 0 1 2 exosome 0.438614273126485 0.4386750057178 0.2703119 0 hPsi_site_14192 iPseU_CNN:0.2703119;iRNA_PseU:0 14193 chr20 34205503 34205503 1 + G A UCEC 34205502 + 34205482 34205522 41 AGGAGACGTGCTGGTCAGCATGTACAGGTCAGAGGAAGGGA AGGAGACGTGCTGGTCAGCATATACAGGTCAGAGGAAGGGA < 41bp 0.516531910825978 0.876329211208736 0.33332628 0.5994949 prediction 0.719594600765516 Functional Gain - SPAG4 ENSG00000061656 CDS Human protein_coding chr20:34205502 chr20:34205503 nonsynonymous SNV 0.856 1 22 hPsi_associated_SNPs_20469 0 0 1 0 2 chromatin 0.438718797946146 0.438720986529151 0.1989898 0 hPsi_site_14193 iPseU_CNN:0.1989898;iRNA_PseU:0 14194 chr1 249142625 249142625 1 + G A SARC 249142624 + 249142604 249142644 41 CGTCGCCTCCAAGCTTGCACTGCACCGCAAGACGCACCTGG CGTCGCCTCCAAGCTTGCACTACACCGCAAGACGCACCTGG < 41bp 0.496684197103714 0.859789759501918 0.34257048 0.672096 prediction 0.719579519003835 Functional Gain - ZNF672 ENSG00000171161 CDS Human protein_coding chr1:249142624 chr1:249142625 synonymous SNV . 0 22 hPsi_associated_SNPs_20470 0 0 1 0 0 Ribosome 0.438692613427489 0.424937343434622 0.344192 0 hPsi_site_14194 iPseU_CNN:0.344192;iRNA_PseU:0 14195 chr15 22383191 22383191 1 + G A UCEC 22383190 + 22383170 22383210 41 AGAACAAGGCCATGTCCACGTGCACCACTCGTGTCATTATT AGAACAAGGCCATGTCCACGTACACCACTCGTGTCATTATT < 41bp 0.4818088384413 0.859783500536804 0.3778477 0.8335012 prediction 0.719567001073609 Functional Gain - OR4N4 ENSG00000183706 CDS Human protein_coding chr15:22383190 chr15:22383191 nonsynonymous SNV 0.010 4 22 hPsi_associated_SNPs_20471 0 0 0 0 0 unknown 0.442946363209267 0.436457732590762 0.6670024 0 hPsi_site_14195 iPseU_CNN:0.6670024;iRNA_PseU:0 14196 chr8 145139354 145139354 1 + G A COAD 145139353 + 145139333 145139373 41 GACATCATTGGATGGACCGCTGCAGGGCCTGCAGACACTGC GACATCATTGGATGGACCGCTACAGGGCCTGCAGACACTGC < 41bp 0.522329133372133 0.882106559428146 0.24756795 0.64893264 prediction 0.719554852112024 Functional Gain - GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139353 chr8:145139354 synonymous SNV . 0 22 hPsi_associated_SNPs_20472 0 0 1 0 1 Endoplasmic reticulum 0.439108169925395 0.438531145243625 0.29786528 0 hPsi_site_14196 iPseU_CNN:0.29786528;iRNA_PseU:0 14197 chr20 54974299 54974299 1 + G A STAD 54974298 + 54974278 54974318 41 GAGAAAGCACATGACGGTGCTGAAGTTTGTTCTGCCATTTT GAGAAAGCACATGACGGTGCTAAAGTTTGTTCTGCCATTTT < 41bp 0.478364809030895 0.859777316870187 0.20763654 0.31357875 prediction 0.719554633740374 Functional Gain - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54974298 chr20:54974299 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_20473 0 0 1 0 0 Cytosol 0.438302274135713 0.438730919885091 0 0 hPsi_site_14197 iPseU_CNN:0;iRNA_PseU:0 14198 chr19 12858250 12858250 1 + G A CESC 12858249 + 12858229 12858269 41 CGTATGCATTGCTGAGTTCCTGTCCCTGTATGAGACAGAGA CGTATGCATTGCTGAGTTCCTATCCCTGTATGAGACAGAGA < 41bp 0.47491681729798 0.859767220008253 0.26427507 0.40351996 prediction 0.719534440016506 Functional Gain - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12858249 chr19:12858250 synonymous SNV . 0 22 hPsi_associated_SNPs_20474 0 0 1 0 1 Ribosome 0.438717670542142 0.438713797559977 0 0 hPsi_site_14198 iPseU_CNN:0;iRNA_PseU:0 14199 chr1 6688672 6688672 1 + G A UCEC 6688671 + 6688651 6688691 41 CCGAGCACTTCCGGCCAGAGTGCTTCAGCGCCTTTGGAAAC CCGAGCACTTCCGGCCAGAGTACTTCAGCGCCTTTGGAAAC < 41bp 0.527321991484058 0.887086349454433 0.33799362 0.6147767 prediction 0.719528715940749 Functional Gain - THAP3 ENSG00000041988 CDS Human protein_coding chr1:6688671 chr1:6688672 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_20475 0 0 1 0 1 Ribosome 0.4387198627394 0.438718590649375 0.2295534 0 hPsi_site_14199 iPseU_CNN:0.2295534;iRNA_PseU:0 14200 chr9 37762013 37762013 1 + G A BLCA 37762012 + 37761992 37762032 41 GGCATCCTAGAGGAGACAGGTGAAGATGGACTTCCTGAAGG GGCATCCTAGAGGAGACAGGTAAAGATGGACTTCCTGAAGG < 41bp 0.476083553640861 0.859756321385887 0.34098744 0.63720465 prediction 0.719512642771774 Functional Gain - TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37762012 chr9:37762013 nonsynonymous SNV 0.689 1 22 hPsi_associated_SNPs_20476 0 0 0 0 0 chromatin 0.438718592995113 0.438718592995048 0.2744093 0 hPsi_site_14200 iPseU_CNN:0.2744093;iRNA_PseU:0 14201 chr2 27016146 27016146 1 + G A HNSC 27016145 + 27016125 27016165 41 GCCTTGAGGAGGGACTCGGCTGAGCTCCTGCACCCAGTGTT GCCTTGAGGAGGGACTCGGCTAAGCTCCTGCACCCAGTGTT < 41bp 0.47928928200815 0.859755610384957 0.66494894 0.9272442 prediction 0.719511220769914 Functional Gain - CENPA ENSG00000115163 CDS Human protein_coding chr2:27016145 chr2:27016146 synonymous SNV . 0 22 hPsi_associated_SNPs_20477 0 0 1 3 1 Ribosome 0.438719479432722 0.438717773361601 0.52459052 0 hPsi_site_14201 iPseU_CNN:0.52459052;iRNA_PseU:0 14202 chr6 160494395 160494395 1 + G A UCEC 160494394 + 160494374 160494414 41 AGAGTGTGATCAGTTTCGTGTGCAGGCCTGAGGCCAGGCCA AGAGTGTGATCAGTTTCGTGTACAGGCCTGAGGCCAGGCCA < 41bp 0.518536340921382 0.878285431912757 0.31020224 0.5382399 prediction 0.719498181982751 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494394 chr6:160494395 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_20478 0 0 1 0 0 Endoplasmic reticulum 0.438584449178803 0.438900267241439 0.0764798 0 hPsi_site_14202 iPseU_CNN:0.0764798;iRNA_PseU:0 14203 chr11 1858496 1858496 1 + G A rs141428647 1858495 + 1858475 1858515 41 GCCCGTAGGCAAGGTGCACCTGGGTGCCCGGGCCTCGGGGC GCCCGTAGGCAAGGTGCACCTAGGTGCCCGGGCCTCGGGGC < 41bp 0.513362261986424 0.873101000873128 0.19211122 0.3641728 prediction 0.719477477773408 Functional Gain - SYT8 ENSG00000149043 CDS Human protein_coding chr11:1858495 chr11:1858496 synonymous SNV . 0 22 hPsi_associated_SNPs_20479 0 0 0 0 1 exosome 0.438718592994289 0.438718592995098 0 0 hPsi_site_14203 iPseU_CNN:0;iRNA_PseU:0 14204 chr2 219137389 219137389 1 + G A LUSC 219137388 + 219137368 219137408 41 GATGAAGGCTCGGCAGAACATGCGGTTGTCCAACACGGGCG GATGAAGGCTCGGCAGAACATACGGTTGTCCAACACGGGCG < 41bp 0.48919777587214 0.859734184466365 0.27681154 0.34399164 prediction 0.71946836893273 Functional Gain - PNKD ENSG00000127838 CDS Human protein_coding chr2:219137388 chr2:219137389 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20480 0 0 1 0 1 Endoplasmic reticulum 0.438718512626382 0.43871885325193 0 0 hPsi_site_14204 iPseU_CNN:0;iRNA_PseU:0 14205 chr17 72469878 72469878 1 + G A LGG 72469877 + 72469857 72469897 41 GTGTCCATCAGGGACAGTCCTGCAAACCTCAGCTTCACAGT GTGTCCATCAGGGACAGTCCTACAAACCTCAGCTTCACAGT < 41bp 0.486405431487148 0.859725064244361 0.34665415 0.57682586 prediction 0.719450128488721 Functional Gain - CD300A ENSG00000167851 CDS Human protein_coding chr17:72469877 chr17:72469878 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_20481 0 0 0 0 0 Endoplasmic reticulum 0.438671127329278 0.438615543155821 0.15365172 0 hPsi_site_14205 iPseU_CNN:0.15365172;iRNA_PseU:0 14206 chr6 43030855 43030855 1 + G A LUAD 43030854 + 43030834 43030874 41 CCTGGAGTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATG CCTGGAGTTCCTGGGGCAGCTACGGCAGTATGATGAGGATG < 41bp 0.489330014035906 0.859715199077028 0.17809758 0.30750155 prediction 0.719430398154056 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43030854 chr6:43030855 synonymous SNV . 0 22 hPsi_associated_SNPs_20482 0 0 1 0 1 Cytosol 0.438718363937618 0.438617738153625 0 0 hPsi_site_14206 iPseU_CNN:0;iRNA_PseU:0 14207 chr1 32829281 32829281 1 + G A rs2270537 32829280 + 32829260 32829300 41 CATCCAGGTGTATGAGATGCTGGAGTCTGCCGACGGGAAAA CATCCAGGTGTATGAGATGCTAGAGTCTGCCGACGGGAAAA < 41bp 0.48437463203336 0.859689154953212 0.2608657 0.40588722 prediction 0.719378309906424 Functional Gain - TSSK3 ENSG00000162526 CDS Human protein_coding chr1:32829280 chr1:32829281 synonymous SNV . 0 22 hPsi_associated_SNPs_20483 0 0 0 0 0 chromatin 0.438718627026289 0.438718592802759 0 0 hPsi_site_14207 iPseU_CNN:0;iRNA_PseU:0 14208 chr10 88719792 88719792 1 + G A CESC 88719791 + 88719771 88719811 41 CAAGGAGCAGGCCAACGCCGTGAGCGAGGCTGTGGTGAGCA CAAGGAGCAGGCCAACGCCGTAAGCGAGGCTGTGGTGAGCA < 41bp 0.463827569627147 0.859685703497964 0.20749745 0.82999265 prediction 0.719371406995927 Functional Gain - SNCG ENSG00000173267 CDS Human protein_coding chr10:88719791 chr10:88719792 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_20484 0 0 1 0 2 Cytosol 0.438563387403146 0.438409748045681 0.6599853 0 hPsi_site_14208 iPseU_CNN:0.6599853;iRNA_PseU:0 14209 chr11 972183 972183 1 + G A UCEC 972182 + 972162 972202 41 TCATGGGCCTGGCCCTGCACTGCATCGCCAGCGTGGGCAGC TCATGGGCCTGGCCCTGCACTACATCGCCAGCGTGGGCAGC < 41bp 0.464110352679877 0.859683769295907 0.3501233 0.7890418 prediction 0.719367538591813 Functional Gain - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:972182 chr11:972183 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20485 0 0 1 0 1 Nucleus 0.438718599549901 0.438718669147251 0.5780836 0 hPsi_site_14209 iPseU_CNN:0.5780836;iRNA_PseU:0 14210 chr11 123811056 123811056 1 + G A DLBC 123811055 + 123811035 123811075 41 TCTACCTGTGCCTCTCACATTGCTGTGGTGACCTTAATCTT TCTACCTGTGCCTCTCACATTACTGTGGTGACCTTAATCTT < 41bp 0.490489340425735 0.859681743345653 0.32084286 0.36499745 prediction 0.719363486691305 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123811055 chr11:123811056 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_20486 0 0 0 0 0 exosome 0.4383851637748 0.438347026938643 0 0 hPsi_site_14210 iPseU_CNN:0;iRNA_PseU:0 14211 chr19 36636752 36636752 1 + G A rs145631909 36636751 + 36636731 36636771 41 CTTTGAGGAATTCAAGTACTTGTGGAACAACATCAAAAGGT CTTTGAGGAATTCAAGTACTTATGGAACAACATCAAAAGGT < 41bp 0.472886530130255 0.859668470659255 0.22056031 0.42243612 prediction 0.719336941318511 Functional Gain - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36636751 chr19:36636752 synonymous SNV . 0 22 hPsi_associated_SNPs_20487 0 0 1 0 2 Ribosome 0.438718611351109 0.438718594382118 0 0 hPsi_site_14211 iPseU_CNN:0;iRNA_PseU:0 14212 chr20 37378691 37378691 1 + G A rs35062786 37378690 + 37378670 37378710 41 CATAGTTTTGACAGAAGCTGTGTGCAACCCACTGTATTCAC CATAGTTTTGACAGAAGCTGTATGCAACCCACTGTATTCAC < 41bp 0.474908945789067 0.85964876205669 0.3436848 0.6358012 prediction 0.71929752411338 Functional Gain - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37378690 chr20:37378691 synonymous SNV . 0 22 hPsi_associated_SNPs_20488 0 0 0 0 1 chromatin 0.43881934015564 0.438709619903503 0.2716024 0 hPsi_site_14212 iPseU_CNN:0.2716024;iRNA_PseU:0 14213 chr19 5909016 5909016 1 + G A GBM 5909015 + 5908995 5909035 41 CTGGATGCCCTGGCTGAGGCTGAGCGCCTGGGGCCCCTGCC CTGGATGCCCTGGCTGAGGCTAAGCGCCTGGGGCCCCTGCC < 41bp 0.494917256112018 0.859644832683943 0.27109206 0.53166455 prediction 0.719289665367885 Functional Gain - VMAC ENSG00000187650 CDS Human protein_coding chr19:5909015 chr19:5909016 nonsynonymous SNV 0.429 4 22 hPsi_associated_SNPs_20489 0 0 0 0 0 exosome 0.43871858152012 0.438718592995104 0.0633291 0 hPsi_site_14213 iPseU_CNN:0.0633291;iRNA_PseU:0 14214 chr17 48357416 48357416 1 + G A rs1969512 48357415 + 48357395 48357435 41 TGGGGTACGCGTGTCCCTTGTGTGGGTTTCCCAATCCCTTC TGGGGTACGCGTGTCCCTTGTATGGGTTTCCCAATCCCTTC < 41bp 0.484040767984849 0.859640046620146 0.45468566 0.63193166 prediction 0.719280093240293 Functional Gain - TMEM92 ENSG00000167105 UTR3 Human protein_coding chr17:48357415 chr17:48357416 . . 0 22 hPsi_associated_SNPs_20490 0 0 0 0 0 nucleolus 0.438718510939814 0.438717244711667 0.26386332 0 hPsi_site_14214 iPseU_CNN:0.26386332;iRNA_PseU:0 14215 chr16 31429453 31429453 1 + G A SKCM 31429452 + 31429432 31429472 41 GAGACAGTGCCCACTGAGGATGAGGGCCTAAGAAGCAGCCG GAGACAGTGCCCACTGAGGATAAGGGCCTAAGAAGCAGCCG < 41bp 0.466746887784033 0.85963680099717 0.3311606 0.6280884 prediction 0.71927360199434 Functional Gain - ITGAD ENSG00000156886 CDS Human protein_coding chr16:31429452 chr16:31429453 nonsynonymous SNV 0.043 0 22 hPsi_associated_SNPs_20491 0 0 0 0 2 nucleolus 0.43871860454372 0.438718589545681 0.2561768 0 hPsi_site_14215 iPseU_CNN:0.2561768;iRNA_PseU:0 14216 chr7 100866828 100866828 1 + G A UCEC 100866827 + 100866807 100866847 41 AAAAAACTTTCAGGCCCTGTTGGAGGAGCAGGTGAGAGGAG AAAAAACTTTCAGGCCCTGTTAGAGGAGCAGGTGAGAGGAG < 41bp 0.483212414752118 0.859632098918778 0.19388288 0.2574358 prediction 0.719264197837557 Functional Gain - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866827 chr7:100866828 synonymous SNV . 0 22 hPsi_associated_SNPs_20492 0 0 1 0 2 Cytosol 0.438718995716735 0.438718593066204 0 0 hPsi_site_14216 iPseU_CNN:0;iRNA_PseU:0 14217 chr2 74642950 74642950 1 + G A ESCA 74642949 + 74642929 74642969 41 CTCCTCGTCCTCACCCCATGTGGGGTCCTCAGCTACTGCAG CTCCTCGTCCTCACCCCATGTAGGGTCCTCAGCTACTGCAG < 41bp 0.505168413045009 0.864799705026874 0.34773064 0.62655973 prediction 0.71926258396373 Functional Gain - C2orf81 ENSG00000159239 CDS Human protein_coding chr2:74642949 chr2:74642950 synonymous SNV . 0 22 hPsi_associated_SNPs_20493 0 0 0 0 0 exosome 0.438718516496825 0.438717513769306 0.25311946 0 hPsi_site_14217 iPseU_CNN:0.25311946;iRNA_PseU:0 14218 chr19 55993133 55993133 1 + G A UCEC 55993132 + 55993112 55993152 41 CTTCACGCAGAGCACCAACCTGCGGCAGCACCAGCGCGTGC CTTCACGCAGAGCACCAACCTACGGCAGCACCAGCGCGTGC < 41bp 0.508062055947382 0.867691852995452 0.38531554 0.5620397 prediction 0.71925959409614 Functional Gain - ZNF628 ENSG00000197483 CDS Human protein_coding chr19:55993132 chr19:55993133 synonymous SNV . 0 22 hPsi_associated_SNPs_20494 0 0 0 0 0 exosome 0.438718278882108 0.438682866360861 0.1240794 0 hPsi_site_14218 iPseU_CNN:0.1240794;iRNA_PseU:0 14219 chr10 75531001 75531001 1 + G A rs183466916 75531000 + 75530980 75531020 41 ATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCAC ATAAGGAGACACCTTCTTTCTAGGCTCAAGTATCCTGCCAC < 41bp 0.489658422633001 0.859619726262382 0.1974251 0.3183283 prediction 0.719239452524763 Functional Gain - SEC24C ENSG00000176986 UTR3 Human protein_coding chr10:75531000 chr10:75531001 . . 0 22 hPsi_associated_SNPs_20495 0 0 1 1 0 Nucleus 0.438721140792928 0.438721049556698 0 0 hPsi_site_14219 iPseU_CNN:0;iRNA_PseU:0 14220 chr6 29556430 29556430 1 + G A SKCM 29556429 + 29556409 29556449 41 AAAGGGCGGAGGAAAGCTTTTGGGACCTGCTCCTCCCATCT AAAGGGCGGAGGAAAGCTTTTAGGACCTGCTCCTCCCATCT < 41bp 0.503111277235524 0.862727171991713 0.3050999 0.75105214 prediction 0.719231789512378 Functional Gain - OR2H2 ENSG00000204657 CDS Human protein_coding chr6:29556429 chr6:29556430 nonsynonymous SNV 0.826 1 22 hPsi_associated_SNPs_20496 0 0 0 0 0 unknown 0.438718592995102 0.438718592995118 0.50210428 0 hPsi_site_14220 iPseU_CNN:0.50210428;iRNA_PseU:0 14221 chr11 63996736 63996736 1 + C T rs144487413 63996737 - 63996717 63996757 41 CAGCAGGGGCTGGCTCAGGGTGAGCAGCGGCAGGTTCACCT CAGCAGGGGCTGGCTCAGGGTAAGCAGCGGCAGGTTCACCT < 41bp 0.509039090944867 0.868654864252196 0.30737287 0.63286614 prediction 0.719231546614659 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63996737 chr11:63996736 synonymous SNV . 0 22 hPsi_associated_SNPs_20497 0 0 0 0 0 Ribosome 0.438718600163023 0.438718598802559 0.26573228 0 hPsi_site_14221 iPseU_CNN:0.26573228;iRNA_PseU:0 14222 chr15 50494767 50494767 1 + G A HNSC 50494766 + 50494746 50494786 41 GTAAGCGGATTGAAGGCAGATGATGTCATCTATATCACTCT GTAAGCGGATTGAAGGCAGATAATGTCATCTATATCACTCT < 41bp 0.520440785268455 0.880045737294526 0.19620505 0.27771145 prediction 0.719209904052142 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50494766 chr15:50494767 nonsynonymous SNV 0.670 4 22 hPsi_associated_SNPs_20498 0 0 1 0 2 Ribosome 0.449957488508349 0.438368957796312 0 0 hPsi_site_14222 iPseU_CNN:0;iRNA_PseU:0 14223 chr11 64065119 64065119 1 + G A COAD 64065118 + 64065098 64065138 41 ACCGTGGGCTTTGGCGACTATGTGGCCGGTGAGGCCGCCCT ACCGTGGGCTTTGGCGACTATATGGCCGGTGAGGCCGCCCT < 41bp 0.512043224475559 0.871640197259487 0.20498917 0.24922362 prediction 0.719193945567856 Functional Gain - KCNK4 ENSG00000182450 CDS Human protein_coding chr11:64065118 chr11:64065119 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_20499 0 0 0 0 2 exosome 0.438718593091897 0.438718593225212 0 0 hPsi_site_14223 iPseU_CNN:0;iRNA_PseU:0 14224 chr2 29356615 29356615 1 + G A UCEC 29356614 + 29356594 29356634 41 CTGGACAAACATGAATGCTTTGCATTATGCTGCTTATTTTG CTGGACAAACATGAATGCTTTACATTATGCTGCTTATTTTG < 41bp 0.486486595042766 0.859596602027822 0.18801072 0.2799821 prediction 0.719193204055645 Functional Gain - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29356614 chr2:29356615 synonymous SNV . 0 22 hPsi_associated_SNPs_20500 0 0 1 8 1 nucleus 0.438721959866005 0.438722099487586 0 0 hPsi_site_14224 iPseU_CNN:0;iRNA_PseU:0 14225 chr2 216213910 216213910 1 + G A rs145563811 216213909 + 216213889 216213929 41 GAATGGGTTGAGAAACTGACTGAAGTTTCTATCAGCTCTGA GAATGGGTTGAGAAACTGACTAAAGTTTCTATCAGCTCTGA < 41bp 0.519663348680206 0.879255497483837 0.2695952 0.30635154 prediction 0.719184297607261 Functional Gain - ATIC ENSG00000138363 CDS Human protein_coding chr2:216213909 chr2:216213910 nonsynonymous SNV 0.013 0 22 hPsi_associated_SNPs_20501 0 0 1 0 1 chromatin 0.43873070546824 0.438712798547063 0 0 hPsi_site_14225 iPseU_CNN:0;iRNA_PseU:0 14226 chr16 66420949 66420949 1 + G A LUAD 66420948 + 66420928 66420968 41 GACGTGAACGACAACTGGCCTGTGTTCACGCATCGGTTGTT GACGTGAACGACAACTGGCCTATGTTCACGCATCGGTTGTT < 41bp 0.466038150351753 0.85957366951977 0.26303536 0.37549546 prediction 0.71914733903954 Functional Gain - CDH5 ENSG00000179776 CDS Human protein_coding chr16:66420948 chr16:66420949 nonsynonymous SNV 0.951 1 22 hPsi_associated_SNPs_20502 0 0 0 0 1 Cytosol 0.43872458554271 0.438718936931856 0 0 hPsi_site_14226 iPseU_CNN:0;iRNA_PseU:0 14227 chr5 149754216 149754216 1 + G A rs112039991 149754215 + 149754195 149754235 41 AAAACCTCTCAGGTCGGAGCTGCCTCAGCCCCTGCCAAGGA AAAACCTCTCAGGTCGGAGCTACCTCAGCCCCTGCCAAGGA < 41bp 0.467248469385175 0.859551645209897 0.32673445 0.65977603 prediction 0.719103290419794 Functional Gain - TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754215 chr5:149754216 nonsynonymous SNV 0.243 0 22 hPsi_associated_SNPs_20503 0 0 1 0 1 Nucleus 0.43771875361967 0.43861444771763 0.31955206 0 hPsi_site_14227 iPseU_CNN:0.31955206;iRNA_PseU:0 14228 chr8 98699718 98699718 1 + G A UCEC 98699717 + 98699697 98699737 41 GCAGCGTAAACGTGATAAGGTGCTGACTGATTCTGGTTCAT GCAGCGTAAACGTGATAAGGTACTGACTGATTCTGGTTCAT < 41bp 0.477253468504428 0.859546782921848 0.28836805 0.743855 prediction 0.719093565843695 Functional Gain - MTDH ENSG00000147649 CDS Human protein_coding chr8:98699717 chr8:98699718 synonymous SNV . 0 22 hPsi_associated_SNPs_20504 0 0 1 0 1 Ribosome 0.438672965993602 0.438709016936981 0.48771 0 hPsi_site_14228 iPseU_CNN:0.48771;iRNA_PseU:0 14229 chr22 42059786 42059786 1 + G A COAD 42059785 + 42059765 42059805 41 TGGGCTGAAGAAGCAGGAGCTGCTGGAAGCCCTCACCAAGC TGGGCTGAAGAAGCAGGAGCTACTGGAAGCCCTCACCAAGC < 41bp 0.476486291752732 0.859539781654697 0.29053468 0.65625834 prediction 0.719079563309393 Functional Gain - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42059785 chr22:42059786 synonymous SNV . 0 22 hPsi_associated_SNPs_20505 0 0 1 2 0 Cytosol 0.438704304776499 0.43873516253626 0.31251668 0 hPsi_site_14229 iPseU_CNN:0.31251668;iRNA_PseU:0 14230 chr12 6426755 6426755 1 + G A GBM 6426754 + 6426734 6426774 41 TCTGGGAGGCAGATGCTCTGTGACTTGCTTATCAAGCCCCA TCTGGGAGGCAGATGCTCTGTAACTTGCTTATCAAGCCCCA < 41bp 0.527383171573729 0.88690964921085 0.35690647 0.6268261 prediction 0.719052955274242 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6426754 chr12:6426755 nonsynonymous SNV 0.934 4 22 hPsi_associated_SNPs_20506 0 0 0 0 1 Nucleus 0.438718585202401 0.438718553657578 0.2536522 0 hPsi_site_14230 iPseU_CNN:0.2536522;iRNA_PseU:0 14231 chr17 41141403 41141403 1 + G A STAD 41141402 + 41141382 41141422 41 AAACTGGACATGAATCTGAATGAGGACATCAGTTCCCTGTC AAACTGGACATGAATCTGAATAAGGACATCAGTTCCCTGTC < 41bp 0.470099369743318 0.859488043755519 0.2741282 0.36495724 prediction 0.718976087511038 Functional Gain - RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41141402 chr17:41141403 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20507 0 0 1 0 1 exosome 0.438692787600679 0.438718596961109 0 0 hPsi_site_14231 iPseU_CNN:0;iRNA_PseU:0 14232 chrX 153631661 153631661 1 + C T ESCA 153631662 - 153631642 153631682 41 TAAGGCCGTAGAGAAGGAGCTGAACGCCCTCTACGATGTGT TAAGGCCGTAGAGAAGGAGCTAAACGCCCTCTACGATGTGT < 41bp 0.469142963354907 0.859486725926488 0.6426432 0.8807664 prediction 0.718973451852976 Functional Gain - DNASE1L1 ENSG00000013563;ENSG00000147403 CDS Human other chrX:153631662 chrX:153631661 stopgain 0.934 0 22 hPsi_associated_SNPs_20508 0 0 1 0 2 Endoplasmic reticulum 0.438715629065394 0.438718808610858 0.4762464 0 hPsi_site_14232 iPseU_CNN:0.4762464;iRNA_PseU:0 14233 chr17 26800790 26800790 1 + G A UCEC 26800789 + 26800769 26800809 41 CTACCTGATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTC CTACCTGATCGTGTTCTTCGTACCCATTCTCCTGCTGCCTC < 41bp 0.489199748565516 0.859475638777492 0.31283945 0.7897632 prediction 0.718951277554983 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26800789 chr17:26800790 synonymous SNV . 0 22 hPsi_associated_SNPs_20509 0 0 0 0 1 unknown 0.438673051978677 0.438636659202594 0.5795264 0 hPsi_site_14233 iPseU_CNN:0.5795264;iRNA_PseU:0 14234 chr10 75554039 75554039 1 + G A rs118159663 75554038 + 75554018 75554058 41 ACTCTGTGACTATCGGCCTGTGTTGCCTCTCATGCTGGCCA ACTCTGTGACTATCGGCCTGTATTGCCTCTCATGCTGGCCA < 41bp 0.522022552788683 0.881496709556258 0.35953915 0.65232444 prediction 0.718948313535149 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75554038 chr10:75554039 synonymous SNV . 0 22 hPsi_associated_SNPs_20510 0 0 1 0 1 Cytosol 0.438654580306965 0.438469808199618 0.30464888 0 hPsi_site_14234 iPseU_CNN:0.30464888;iRNA_PseU:0 14235 chr2 228771879 228771879 1 + G A rs534633439 228771878 + 228771858 228771898 41 GGGATGCTACAAATGGAAAATGTGTGGCAACCTTAACAGGC GGGATGCTACAAATGGAAAATATGTGGCAACCTTAACAGGC < 41bp 0.511421973526572 0.870878151028785 0.6479783 0.66523266 prediction 0.718912355004426 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228771878 chr2:228771879 nonsynonymous SNV 0.947 0 22 hPsi_associated_SNPs_20511 0 0 0 0 2 exosome 0.438718067287704 0.438718588259222 0.03450872 0 hPsi_site_14235 iPseU_CNN:0.03450872;iRNA_PseU:0 14236 chr22 51160416 51160416 1 + G A UCEC 51160415 + 51160395 51160435 41 GGTGTCCAGCATGTCCACCTTGAGCTCGGAGAGCGGGGAAC GGTGTCCAGCATGTCCACCTTAAGCTCGGAGAGCGGGGAAC < 41bp 0.487499445143157 0.859440154989807 0.35546488 0.63535845 prediction 0.718880309979613 Functional Gain - SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51160415 chr22:51160416 synonymous SNV . 0 22 hPsi_associated_SNPs_20512 0 0 1 0 0 cytosol 0.438720294460364 0.438689654398375 0.2707169 0 hPsi_site_14236 iPseU_CNN:0.2707169;iRNA_PseU:0 14237 chr11 47346083 47346083 1 + G A UCEC 47346082 + 47346062 47346102 41 GACTGGTGAGGGTGGCCTGCTGCAGGTGACCCTGGAAGGGA GACTGGTGAGGGTGGCCTGCTACAGGTGACCCTGGAAGGGA < 41bp 0.489636309137111 0.85942286151468 0.22077954 0.4675633 prediction 0.71884572302936 Functional Gain - MADD ENSG00000110514 CDS Human protein_coding chr11:47346082 chr11:47346083 synonymous SNV . 0 22 hPsi_associated_SNPs_20513 0 0 1 0 2 Nucleus 0.438718595997199 0.438718592634727 0 0 hPsi_site_14237 iPseU_CNN:0;iRNA_PseU:0 14238 chr19 10224937 10224937 1 + G A rs115986278 10224936 + 10224916 10224956 41 GGCGGGGTTGGGCTGCGGCCTGCCGCTGCTGCTCACGCTGG GGCGGGGTTGGGCTGCGGCCTACCGCTGCTGCTCACGCTGG < 41bp 0.488207451114437 0.859422542458065 0.31334487 0.6656136 prediction 0.718845084916131 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224936 chr19:10224937 synonymous SNV . 0 22 hPsi_associated_SNPs_20514 0 0 1 0 0 unknown 0.438719682760089 0.438640385696393 0.3312272 0 hPsi_site_14238 iPseU_CNN:0.3312272;iRNA_PseU:0 14239 chr22 38211449 38211449 1 + G A rs570407872 38211448 + 38211428 38211468 41 CACAGATGAGCTGCTGGGTGTGATGGACCAGGTCACCATCA CACAGATGAGCTGCTGGGTGTAATGGACCAGGTCACCATCA < 41bp 0.46756256255187 0.859406858135778 0.2145243 0.7370322 prediction 0.718813716271556 Functional Gain - GCAT ENSG00000100116 CDS Human protein_coding chr22:38211448 chr22:38211449 synonymous SNV . 0 22 hPsi_associated_SNPs_20515 0 0 1 0 2 Cytosol 0.438704842035413 0.438685093629828 0.4740644 0 hPsi_site_14239 iPseU_CNN:0.4740644;iRNA_PseU:0 14240 chr16 89211787 89211787 1 + G A UCEC 89211786 + 89211766 89211806 41 CCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCA CCTGGAGGTGGAGTGGCACCTACTGGCCCACCCCAGCATCA < 41bp 0.517269411743486 0.876673885729575 0.31266344 0.51245654 prediction 0.718808947972177 Functional Gain - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89211786 chr16:89211787 synonymous SNV . 0 22 hPsi_associated_SNPs_20516 0 0 1 0 1 chromatin 0.43870205638755 0.438564592518477 0.0249130799999999 0 hPsi_site_14240 iPseU_CNN:0.0249130799999999;iRNA_PseU:0 14241 chr20 43938282 43938282 1 + G A UCEC 43938281 + 43938261 43938301 41 GCAACAGTGTGAACAGACTGTGCGGATCCTGCATGCCAAGG GCAACAGTGTGAACAGACTGTACGGATCCTGCATGCCAAGG < 41bp 0.463435657168746 0.859387854167111 0.30527186 0.69907135 prediction 0.718775708334223 Functional Gain - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43938281 chr20:43938282 synonymous SNV . 0 22 hPsi_associated_SNPs_20517 0 0 0 0 2 unknown 0.438718594853222 0.438718594063637 0.3981427 0 hPsi_site_14241 iPseU_CNN:0.3981427;iRNA_PseU:0 14242 chr19 39600725 39600725 1 + G A CESC 39600724 + 39600704 39600744 41 CGTAGATGATGTCTGGGTGGTGAGACCCCTGTTTGGCCGGA CGTAGATGATGTCTGGGTGGTAAGACCCCTGTTTGGCCGGA < 41bp 0.511157601473469 0.870541640005043 0.42125314 0.814526 prediction 0.718768077063149 Functional Gain - ACP7 ENSG00000183760 CDS Human protein_coding chr19:39600724 chr19:39600725 synonymous SNV . 0 22 hPsi_associated_SNPs_20518 0 0 0 1 1 exosome 0.438742946210229 0.43871839383757 0.629052 0 hPsi_site_14242 iPseU_CNN:0.629052;iRNA_PseU:0 14243 chr11 16776574 16776574 1 + G A STAD 16776573 + 16776553 16776593 41 CAAGCTGCTGAGCACCCTGATGAAGTGGAGGATCCCAAAAA CAAGCTGCTGAGCACCCTGATAAAGTGGAGGATCCCAAAAA < 41bp 0.498177498942724 0.859381899623984 0.34218925 0.5122391 prediction 0.718763799247968 Functional Gain - C11orf58 ENSG00000110696 CDS Human protein_coding chr11:16776573 chr11:16776574 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_20519 0 0 1 0 0 Ribosome 0.438718593135826 0.442829128883828 0.0244781999999999 0 hPsi_site_14243 iPseU_CNN:0.0244781999999999;iRNA_PseU:0 14244 chr1 45808127 45808127 1 + G A STAD 45808126 + 45808106 45808146 41 CCGAGCCCGCCGGCCCCTGGTGCTACACAATGGCCTTATAG CCGAGCCCGCCGGCCCCTGGTACTACACAATGGCCTTATAG < 41bp 0.471452153281613 0.859377712746612 0.362996 0.66811 prediction 0.718755425493224 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808126 chr1:45808127 synonymous SNV . 0 22 hPsi_associated_SNPs_20520 0 0 1 3 0 Ribosome 0.43871859299496 0.438718592994934 0.33622 0 hPsi_site_14244 iPseU_CNN:0.33622;iRNA_PseU:0 14245 chr19 19168303 19168303 1 + G A BLCA 19168302 + 19168282 19168322 41 CCCATCCTGGACCTGGGGGCTGAGGCACTCATCATGCAGGC CCCATCCTGGACCTGGGGGCTAAGGCACTCATCATGCAGGC < 41bp 0.514538721561499 0.873911831274095 0.31727934 0.40289116 prediction 0.718746219425191 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19168302 chr19:19168303 nonsynonymous SNV 0.397 3 22 hPsi_associated_SNPs_20521 0 0 1 0 1 Ribosome 0.438607843458715 0.438718592982313 0 0 hPsi_site_14245 iPseU_CNN:0;iRNA_PseU:0 14246 chr19 35613689 35613689 1 + G A rs35578165 35613688 + 35613668 35613708 41 GACTGGCACAGCCTCCAGGTTGGCGGGCTCATCTGCGCTGG GACTGGCACAGCCTCCAGGTTAGCGGGCTCATCTGCGCTGG < 41bp 0.468313847078889 0.859368777676391 0.3700287 0.8426335 prediction 0.718737555352781 Functional Gain - FXYD3 ENSG00000089356 CDS Human protein_coding chr19:35613688 chr19:35613689 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_20522 0 0 0 0 2 Ribosome 0.438718592995069 0.438718593173811 0.685267 0 hPsi_site_14246 iPseU_CNN:0.685267;iRNA_PseU:0 14247 chr16 2024565 2024565 1 + G A UCEC 2024564 + 2024544 2024584 41 GGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGGCCT GGTGACAGCCAGTCGGGCATTACTGCTGGCTCAGTGGGCCT < 41bp 0.479550658590146 0.859359271542975 0.2359154 0.42914796 prediction 0.71871854308595 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2024564 chr16:2024565 synonymous SNV . 0 22 hPsi_associated_SNPs_20523 0 0 1 0 0 Nucleus 0.4387185936733 0.438718593271774 0 0 hPsi_site_14247 iPseU_CNN:0;iRNA_PseU:0 14248 chr15 74468054 74468054 1 + G A OV 74468053 + 74468033 74468073 41 GGAGATCACCAGCCCCAACGTGGGCACTGATGGGCGTGCCC GGAGATCACCAGCCCCAACGTAGGCACTGATGGGCGTGCCC < 41bp 0.476779354219242 0.859358472743035 0.2747832 0.34889126 prediction 0.718716945486069 Functional Gain - ISLR ENSG00000129009 CDS Human protein_coding chr15:74468053 chr15:74468054 synonymous SNV . 0 22 hPsi_associated_SNPs_20524 0 0 0 0 0 Cytosol 0.438731929431707 0.438663684888757 0 0 hPsi_site_14248 iPseU_CNN:0;iRNA_PseU:0 14249 chr19 48248918 48248918 1 + G A STAD 48248917 + 48248897 48248937 41 CACTTCGGTGGACCCAGCGCTGAGGCGGCGGCGGCGAGGCC CACTTCGGTGGACCCAGCGCTAAGGCGGCGGCGGCGAGGCC < 41bp 0.511863877836866 0.871222266498709 0.23523858 0.3049898 prediction 0.718716777323685 Functional Gain - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248917 chr19:48248918 synonymous SNV . 0 22 hPsi_associated_SNPs_20525 0 0 1 0 0 unknown 0.43871846569903 0.438718614000627 0 0 hPsi_site_14249 iPseU_CNN:0;iRNA_PseU:0 14250 chrX 47058309 47058309 1 + G A CESC 47058308 + 47058288 47058328 41 GTTGTCCGAAGTGCCCTCGGTGCCAACCAACGTGAGTGTCC GTTGTCCGAAGTGCCCTCGGTACCAACCAACGTGAGTGTCC < 41bp 0.470232593397064 0.85935836223629 0.6442014 0.923885 prediction 0.718716724472581 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47058308 chrX:47058309 synonymous SNV . 0 22 hPsi_associated_SNPs_20526 0 0 1 0 1 Nucleus 0.438743171019862 0.438329659516657 0.5593672 0 hPsi_site_14250 iPseU_CNN:0.5593672;iRNA_PseU:0 14251 chr2 27291519 27291519 1 + G A rs77543215 27291518 + 27291498 27291538 41 AGGGAGCAGTTGCTCACTCTTGTCCTCTGGAGACAAACCAG AGGGAGCAGTTGCTCACTCTTATCCTCTGGAGACAAACCAG < 41bp 0.514872319776274 0.874198511453516 0.22998303 0.43629962 prediction 0.718652383354484 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27291518 chr2:27291519 synonymous SNV . 0 22 hPsi_associated_SNPs_20527 0 0 0 0 2 Cytosol 0.438759098184853 0.438769636610274 0 0 hPsi_site_14251 iPseU_CNN:0;iRNA_PseU:0 14252 chr1 201842056 201842056 1 + G A GBM 201842055 + 201842035 201842075 41 GAGGAGATCTACAGCATGGATGAGGGCATCCGCACCCGCTC GAGGAGATCTACAGCATGGATAAGGGCATCCGCACCCGCTC < 41bp 0.48340693837841 0.859318299193336 0.3392048 0.60981846 prediction 0.718636598386673 Functional Gain - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201842055 chr1:201842056 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20528 0 0 1 0 1 Nucleus 0.438706459135352 0.438718593351069 0.21963692 0 hPsi_site_14252 iPseU_CNN:0.21963692;iRNA_PseU:0 14253 chr19 12918248 12918248 1 + G A rs145176499 12918247 + 12918227 12918267 41 CCACAGGGTCAAATACAACCTGAACTCCCTGTCACATGATA CCACAGGGTCAAATACAACCTAAACTCCCTGTCACATGATA < 41bp 0.520297836146739 0.879606417722905 0.28380272 0.316495 prediction 0.718617163152331 Functional Gain - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12918247 chr19:12918248 synonymous SNV . 0 22 hPsi_associated_SNPs_20529 0 0 1 0 1 Ribosome 0.438681828438707 0.438718517321449 0 0 hPsi_site_14253 iPseU_CNN:0;iRNA_PseU:0 14254 chr19 6903930 6903930 1 + G A SKCM 6903929 + 6903909 6903949 41 TGCACCAAGCAATGGACAGTTGAATTTCACAGACCAAGGAG TGCACCAAGCAATGGACAGTTAAATTTCACAGACCAAGGAG < 41bp 0.515669337673315 0.874966991206899 0.3230188 0.8211663 prediction 0.718595307067169 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6903929 chr19:6903930 synonymous SNV . 0 22 hPsi_associated_SNPs_20530 0 0 0 0 1 exosome 0.438718593565609 0.438720348683389 0.6423326 0 hPsi_site_14254 iPseU_CNN:0.6423326;iRNA_PseU:0 14255 chr17 1657814 1657814 1 + G A SARC 1657813 + 1657793 1657833 41 GAGGAGGATTACCCCCAGTTTGGCAGCCCCAAGTGAGGGGC GAGGAGGATTACCCCCAGTTTAGCAGCCCCAAGTGAGGGGC < 41bp 0.479369371001156 0.859295692490791 0.31657398 0.43314183 prediction 0.718591384981583 Functional Gain - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657813 chr17:1657814 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20531 0 0 1 0 0 Endoplasmic reticulum 0.438719083876375 0.438718679683211 0 0 hPsi_site_14255 iPseU_CNN:0;iRNA_PseU:0 14256 chr1 1396253 1396253 1 + G A rs112963260 1396252 + 1396232 1396272 41 GCGGGCGCGCCTGGTGAGAATGTATCTTAACGAGTATGTTC GCGGGCGCGCCTGGTGAGAATATATCTTAACGAGTATGTTC < 41bp 0.52188042250805 0.881167214641169 0.2713487 0.4113316 prediction 0.718573584266238 Functional Gain - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1396252 chr1:1396253 nonsynonymous SNV 0.158 1 22 hPsi_associated_SNPs_20532 0 0 0 0 1 Nucleus 0.438725816800458 0.438762567527351 0 0 hPsi_site_14256 iPseU_CNN:0;iRNA_PseU:0 14257 chr20 56140627 56140627 1 + G A SKCM 56140626 + 56140606 56140646 41 TGGATGTTCAACCGGATCGATGGAAAAGCCAGCACCAAGCT TGGATGTTCAACCGGATCGATAGAAAAGCCAGCACCAAGCT < 41bp 0.476135692672441 0.859284881337222 0.43451947 0.75207657 prediction 0.718569762674444 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140626 chr20:56140627 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_20533 0 0 1 0 0 exosome 0.438744274347052 0.438692335016495 0.50415314 0 hPsi_site_14257 iPseU_CNN:0.50415314;iRNA_PseU:0 14258 chr19 45495945 45495945 1 + G A BLCA 45495944 + 45495924 45495964 41 CCGAGTCAACGAGTTTGGCATGAGTGGAGAAGACCCCACAG CCGAGTCAACGAGTTTGGCATAAGTGGAGAAGACCCCACAG < 41bp 0.49205906055753 0.859280202646109 0.25901055 0.46325833 prediction 0.718560405292217 Functional Gain - CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45495944 chr19:45495945 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_20534 0 0 1 0 1 Cytosol 0.43871130280711 0.438719084116872 0 0 hPsi_site_14258 iPseU_CNN:0;iRNA_PseU:0 14259 chr1 55166089 55166089 1 + G A rs200201488 55166088 + 55166068 55166108 41 CCACGACCCCATCATGAAGGTGCTGTCCATTCGAGGCCTGG CCACGACCCCATCATGAAGGTACTGTCCATTCGAGGCCTGG < 41bp 0.469518837438481 0.859276727981418 0.29939532 0.7285967 prediction 0.718553455962836 Functional Gain - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55166088 chr1:55166089 synonymous SNV . 0 22 hPsi_associated_SNPs_20535 0 0 0 0 2 exosome 0.440783924729714 0.438774336144052 0.4571934 0 hPsi_site_14259 iPseU_CNN:0.4571934;iRNA_PseU:0 14260 chr6 7404738 7404738 1 + G A rs78123723 7404737 + 7404717 7404757 41 CATTCAGTACATGAGAAGAATGTATCAGGATGCCAGACTTG CATTCAGTACATGAGAAGAATATATCAGGATGCCAGACTTG < 41bp 0.479058592940113 0.859266381880723 0.51827216 0.5707898 prediction 0.718532763761446 Functional Gain - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7404737 chr6:7404738 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20536 0 0 1 0 2 Ribosome 0.438715364434267 0.438721433854758 0.10503528 0 hPsi_site_14260 iPseU_CNN:0.10503528;iRNA_PseU:0 14261 chr9 135865154 135865154 1 + G A LIHC 135865153 + 135865133 135865173 41 GCAGCTTCGAGTGCCGCATGTGCGGCAAGGCCTTCAAGCGC GCAGCTTCGAGTGCCGCATGTACGGCAAGGCCTTCAAGCGC < 41bp 0.527345803778244 0.886611683285555 0.3332411 0.72740567 prediction 0.718531759014622 Functional Gain - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135865153 chr9:135865154 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_20537 0 0 0 0 1 chromatin 0.438103538681406 0.45047801593004 0.45481134 0 hPsi_site_14261 iPseU_CNN:0.45481134;iRNA_PseU:0 14262 chr22 28389396 28389396 1 + G A CESC 28389395 + 28389375 28389415 41 CAGCCGGAAGCCCACAGCGGTGAGGAGGGCCTGCCAGCCAG CAGCCGGAAGCCCACAGCGGTAAGGAGGGCCTGCCAGCCAG < 41bp 0.509148479547008 0.868412711629968 0.3148722 0.46549258 prediction 0.718528464165921 Functional Gain - TTC28 ENSG00000100154 CDS Human protein_coding chr22:28389395 chr22:28389396 synonymous SNV . 0 22 hPsi_associated_SNPs_20538 0 0 0 0 0 Cytosol 0.438718592958295 0.438715301359903 0 0 hPsi_site_14262 iPseU_CNN:0;iRNA_PseU:0 14263 chr11 62433935 62433935 1 + G A rs188883781 62433934 + 62433914 62433954 41 GCTGCATGCCCAGCCTCGTTTGGGCACTGTCCCCACCTTCG GCTGCATGCCCAGCCTCGTTTAGGCACTGTCCCCACCTTCG < 41bp 0.458298502116675 0.859259794910339 0.38743198 0.7969743 prediction 0.718519589820678 Functional Gain - METTL12 ENSG00000214756 CDS Human protein_coding chr11:62433934 chr11:62433935 synonymous SNV . 0 22 hPsi_associated_SNPs_20539 0 0 0 0 1 Cytosol 0.438748734646825 0.438278256290752 0.5939486 0 hPsi_site_14263 iPseU_CNN:0.5939486;iRNA_PseU:0 14264 chr17 56247582 56247582 1 + G A HNSC 56247581 + 56247561 56247601 41 CCCAAGTACTGAGACTTGCCTGCACTGACACCTCACTGCTG CCCAAGTACTGAGACTTGCCTACACTGACACCTCACTGCTG < 41bp 0.507642012003252 0.866901405746197 0.14475086 0.32676834 prediction 0.718518787485891 Functional Gain - OR4D2 ENSG00000255713 CDS Human protein_coding chr17:56247581 chr17:56247582 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20540 0 0 0 0 0 unknown 0.43960047135254 0.43878787910355 0 0 hPsi_site_14264 iPseU_CNN:0;iRNA_PseU:0 14265 chr11 57428602 57428602 1 + G A LUAD 57428601 + 57428581 57428621 41 CAATGTCAAATTTTCAGATGTGAAAATCTACAAAGTTGGGG CAATGTCAAATTTTCAGATGTAAAAATCTACAAAGTTGGGG < 41bp 0.512925992126577 0.872163984796916 0.26631117 0.2784329 prediction 0.718475985340677 Functional Gain - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428601 chr11:57428602 synonymous SNV . 0 22 hPsi_associated_SNPs_20541 0 0 1 0 0 Cytosol 0.43873268321708 0.438718781962961 0 0 hPsi_site_14265 iPseU_CNN:0;iRNA_PseU:0 14266 chr5 98129101 98129101 1 + G A BLCA 98129100 + 98129080 98129120 41 GTGAACGGCTGCCCCCTGAGTGAACGCATCGATGACGGGCA GTGAACGGCTGCCCCCTGAGTAAACGCATCGATGACGGGCA < 41bp 0.518404717933087 0.877637779422329 0.30554977 0.47700408 prediction 0.718466122978484 Functional Gain - RGMB ENSG00000174136 CDS Human protein_coding chr5:98129100 chr5:98129101 nonsynonymous SNV 0.969 5 22 hPsi_associated_SNPs_20542 0 0 1 0 0 nucleus 0.438737048099541 0.438454869525312 0 0 hPsi_site_14266 iPseU_CNN:0;iRNA_PseU:0 14267 chr2 191064798 191064798 1 + G A HNSC 191064797 + 191064777 191064817 41 GCCTGTCTCAGGATATCTTGTGTGATGCCTTGCAGCAATGG GCCTGTCTCAGGATATCTTGTATGATGCCTTGCAGCAATGG < 41bp 0.489400511255146 0.859229433748367 0.3158295 0.5333703 prediction 0.718458867496734 Functional Gain - C2orf88 ENSG00000187699 CDS Human protein_coding chr2:191064797 chr2:191064798 nonsynonymous SNV 0.023 0 22 hPsi_associated_SNPs_20543 0 0 1 0 0 Nucleus 0.439871347362994 0.438935993409671 0.0667405999999999 0 hPsi_site_14267 iPseU_CNN:0.0667405999999999;iRNA_PseU:0 14268 chr6 43267141 43267141 1 + G A UCEC 43267140 + 43267120 43267160 41 CCTTGCAGTGGGATCTGGTGTGTGAGCAGAAAGGTCTGAAC CCTTGCAGTGGGATCTGGTGTATGAGCAGAAAGGTCTGAAC < 41bp 0.525466682569079 0.884695316891854 0.23263273 0.26526463 prediction 0.71845726864555 Functional Gain - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43267140 chr6:43267141 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_20544 0 0 1 0 2 cytosol 0.438718597032663 0.438718591706025 0 0 hPsi_site_14268 iPseU_CNN:0;iRNA_PseU:0 14269 chr19 57802119 57802119 1 + G A UCEC 57802118 + 57802098 57802138 41 TATCCCTTCTCATCTGGCCTTGCCTGAGGAAGTCTCACTCC TATCCCTTCTCATCTGGCCTTACCTGAGGAAGTCTCACTCC < 41bp 0.488511807605063 0.85922544858662 0.23677203 0.59072363 prediction 0.718450897173239 Functional Gain - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802118 chr19:57802119 synonymous SNV . 0 22 hPsi_associated_SNPs_20545 0 0 1 0 1 Nucleus 0.438718598911707 0.438718632635963 0.18144726 0 hPsi_site_14269 iPseU_CNN:0.18144726;iRNA_PseU:0 14270 chr20 44469499 44469499 1 + G A STAD 44469498 + 44469478 44469518 41 TGAGCAGTTTTTGGGTCACCTGCAGGCAGTGCCTGAGCTGC TGAGCAGTTTTTGGGTCACCTACAGGCAGTGCCTGAGCTGC < 41bp 0.485124149239332 0.859214397736075 0.19429687 0.27598488 prediction 0.718428795472149 Functional Gain - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44469498 chr20:44469499 synonymous SNV . 0 22 hPsi_associated_SNPs_20546 0 0 1 0 0 Ribosome 0.438717300585973 0.438554281819137 0 0 hPsi_site_14270 iPseU_CNN:0;iRNA_PseU:0 14271 chr10 88729991 88729991 1 + G A CESC 88729990 + 88729970 88730010 41 AGCGGCAGCTCAGCAAGTGGTGGACCAGGCCACAGAGGCGG AGCGGCAGCTCAGCAAGTGGTAGACCAGGCCACAGAGGCGG < 41bp 0.52118809143758 0.880394918794824 0.18828619 0.32541695 prediction 0.718413654714487 Functional Gain - ADIRF ENSG00000148671 CDS Human protein_coding chr10:88729990 chr10:88729991 synonymous SNV . 0 22 hPsi_associated_SNPs_20547 0 0 0 0 1 Ribosome 0.438718592866346 0.438718419786388 0 0 hPsi_site_14271 iPseU_CNN:0;iRNA_PseU:0 14272 chr15 68582393 68582393 1 + G A HNSC 68582392 + 68582372 68582412 41 GCTGCCGAAAGCTGTAAAGCTGATGTCGTAGAACTGTTACT GCTGCCGAAAGCTGTAAAGCTAATGTCGTAGAACTGTTACT < 41bp 0.518227241342064 0.87743079133777 0.28940776 0.6494577 prediction 0.718407099991412 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68582392 chr15:68582393 nonsynonymous SNV 0.939 1 22 hPsi_associated_SNPs_20548 0 0 1 0 0 Ribosome 0.438718586793994 0.438716585431342 0.2989154 0 hPsi_site_14272 iPseU_CNN:0.2989154;iRNA_PseU:0 14273 chr1 29189312 29189312 1 + G A SKCM 29189311 + 29189291 29189331 41 CAGCTGGTACTGGGACACGGTGACCAAGATCTGCGTGTTCC CAGCTGGTACTGGGACACGGTAACCAAGATCTGCGTGTTCC < 41bp 0.486106254904963 0.859196646209 0.3120247 0.66090715 prediction 0.718393292418 Functional Gain - OPRD1 ENSG00000116329 CDS Human protein_coding chr1:29189311 chr1:29189312 synonymous SNV . 0 22 hPsi_associated_SNPs_20549 0 0 0 0 1 nucleoplasm 0.440466741941261 0.438718551623327 0.3218143 0 hPsi_site_14273 iPseU_CNN:0.3218143;iRNA_PseU:0 14274 chr3 126708574 126708574 1 + G A CESC 126708573 + 126708553 126708593 41 ATCCAGTCCTGCTACCGTGGTGAGGGCAAGCTCTCCCTGCC ATCCAGTCCTGCTACCGTGGTAAGGGCAAGCTCTCCCTGCC < 41bp 0.49073559081559 0.859188610240533 0.52833766 0.9378753 prediction 0.718377220481065 Functional Gain - PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126708573 chr3:126708574 nonsynonymous SNV 0.389 1 22 hPsi_associated_SNPs_20550 0 0 1 0 1 Ribosome 0.438718592944361 0.438718592995102 0.81907528 0 hPsi_site_14274 iPseU_CNN:0.81907528;iRNA_PseU:0 14275 chr11 77553649 77553649 1 + G A COAD 77553648 + 77553628 77553668 41 GGCCAGGGGGTAGTCGGACTTGGGATTGGAGAGAAACAGGA GGCCAGGGGGTAGTCGGACTTAGGATTGGAGAGAAACAGGA < 41bp 0.474995304223253 0.859187377992502 0.1641329 0.21187544 prediction 0.718374755985005 Functional Gain - AAMDC ENSG00000087884 CDS Human protein_coding chr11:77553648 chr11:77553649 stopgain 1.000 1 22 hPsi_associated_SNPs_20551 0 0 1 0 1 Ribosome 0.438718592995102 0.438718594441222 0 0 hPsi_site_14275 iPseU_CNN:0;iRNA_PseU:0 14276 chr16 67686168 67686168 1 + G A BLCA 67686167 + 67686147 67686187 41 CTACCAGCACCGGATGGAGGTGAGCCCAGCCTCCTTGAGCC CTACCAGCACCGGATGGAGGTAAGCCCAGCCTCCTTGAGCC < 41bp 0.469229733926737 0.859181629948642 0.17630762 0.40114078 prediction 0.718363259897284 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67686167 chr16:67686168 nonsynonymous SNV 0.076 0 22 hPsi_associated_SNPs_20552 0 0 0 0 2 chromatin 0.438741959948759 0.43872441238468 0 0 hPsi_site_14276 iPseU_CNN:0;iRNA_PseU:0 14277 chr7 99654841 99654841 1 + G A BRCA 99654840 + 99654820 99654860 41 GCCAACTCCGGGTGCTCTGCTGTGAGTGGCTGAGGCCCGAG GCCAACTCCGGGTGCTCTGCTATGAGTGGCTGAGGCCCGAG < 41bp 0.460898564882628 0.859181282126853 0.18807268 0.25386897 prediction 0.718362564253707 Functional Gain - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99654840 chr7:99654841 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20553 0 0 1 0 0 chromatin 0.438717403610552 0.438717876233367 0 0 hPsi_site_14277 iPseU_CNN:0;iRNA_PseU:0 14278 chr2 242650848 242650848 1 + G A LUAD 242650847 + 242650827 242650867 41 GGCGCGCTTTGAAGCAGATCTGAAGGACAAGATGGAGGGCA GGCGCGCTTTGAAGCAGATCTAAAGGACAAGATGGAGGGCA < 41bp 0.47468324716736 0.859179819880231 0.28559494 0.6234887 prediction 0.718359639760463 Functional Gain - ING5 ENSG00000168395 CDS Human protein_coding chr2:242650847 chr2:242650848 synonymous SNV . 0 22 hPsi_associated_SNPs_20554 0 0 1 0 1 Ribosome 0.438721143313705 0.438716625836162 0.2469774 0 hPsi_site_14278 iPseU_CNN:0.2469774;iRNA_PseU:0 14279 chr15 75117871 75117871 1 + G A STAD 75117870 + 75117850 75117890 41 GTCCACAGGCAGCCTTCCTCTGGGTCCTGCACCACACACCC GTCCACAGGCAGCCTTCCTCTAGGTCCTGCACCACACACCC < 41bp 0.481035502678168 0.859164727963799 0.24211636 0.42208424 prediction 0.718329455927597 Functional Gain - LMAN1L ENSG00000140506 CDS Human protein_coding chr15:75117870 chr15:75117871 synonymous SNV . 0 22 hPsi_associated_SNPs_20555 0 0 0 0 0 Endoplasmic reticulum 0.438718506798468 0.438517524085548 0 0 hPsi_site_14279 iPseU_CNN:0;iRNA_PseU:0 14280 chr1 11591674 11591674 1 + G A rs141767050 11591673 + 11591653 11591693 41 GCACCCTGAGTGCAAGGAGCTGCCCGAGCCCAACCTGCTCC GCACCCTGAGTGCAAGGAGCTACCCGAGCCCAACCTGCTCC < 41bp 0.466807154323708 0.859156665520035 0.30667946 0.8256681 prediction 0.718313331040071 Functional Gain - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11591673 chr1:11591674 synonymous SNV . 0 22 hPsi_associated_SNPs_20556 0 0 0 0 2 exosome 0.438644467101557 0.438569383527385 0.6513362 0 hPsi_site_14280 iPseU_CNN:0.6513362;iRNA_PseU:0 14281 chr1 46775905 46775905 1 + G A rs189114560 46775904 + 46775884 46775924 41 CGGGAGCGGCTAGAGCTCTGTGATGAGCGTGTATCCTCTCG CGGGAGCGGCTAGAGCTCTGTAATGAGCGTGTATCCTCTCG < 41bp 0.519236340780793 0.878388439052628 0.281924 0.7859882 prediction 0.71830419654367 Functional Gain - UQCRH ENSG00000173660 CDS Human protein_coding chr1:46775904 chr1:46775905 nonsynonymous SNV 0.907 1 22 hPsi_associated_SNPs_20557 0 0 1 0 2 Ribosome 0.438736145482083 0.43871852182076 0.5719764 0 hPsi_site_14281 iPseU_CNN:0.5719764;iRNA_PseU:0 14282 chr5 140516156 140516156 1 + G A SKCM 140516155 + 140516135 140516175 41 CTCCGGGGACAACGGTAGGATGATTTGCTCCATCCAGAATG CTCCGGGGACAACGGTAGGATAATTTGCTCCATCCAGAATG < 41bp 0.494895083967588 0.859146564109649 0.26911288 0.7520952 prediction 0.718293128219298 Functional Gain - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140516155 chr5:140516156 nonsynonymous SNV 0.588 0 22 hPsi_associated_SNPs_20558 0 0 0 0 0 Endoplasmic reticulum 0.438648063695855 0.43871859299024 0.5041904 0 hPsi_site_14282 iPseU_CNN:0.5041904;iRNA_PseU:0 14283 chr4 184931890 184931890 1 + G A CESC 184931889 + 184931869 184931909 41 TCTGACTTTGGCAGAAGGGGTGAAAAAGCTCTCCCCTTCTG TCTGACTTTGGCAGAAGGGGTAAAAAAGCTCTCCCCTTCTG < 41bp 0.484755042882143 0.859145103186362 0.6504092 0.85260624 prediction 0.718290206372724 Functional Gain - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184931889 chr4:184931890 synonymous SNV . 0 22 hPsi_associated_SNPs_20559 0 0 0 0 0 exosome 0.438718384852089 0.438769578148391 0.40439408 0 hPsi_site_14283 iPseU_CNN:0.40439408;iRNA_PseU:0 14284 chrX 117960326 117960326 1 + G A BLCA 117960325 + 117960305 117960345 41 GGCCCAGGTTTTTGAGAATTTGATCATCACTCTCCAGGAGC GGCCCAGGTTTTTGAGAATTTAATCATCACTCTCCAGGAGC < 41bp 0.506170881822801 0.865313838369225 0.18584141 0.5277124 prediction 0.718285913092848 Functional Gain - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117960325 chrX:117960326 synonymous SNV . 0 22 hPsi_associated_SNPs_20560 0 0 1 0 0 exosome 0.438721448073052 0.438713277514717 0.0554247999999999 0 hPsi_site_14284 iPseU_CNN:0.0554247999999999;iRNA_PseU:0 14285 chr1 177250622 177250622 1 + G A COAD 177250621 + 177250601 177250641 41 GAGGGCTTTCAATTCTAAGCTGCCAAACCCTGTGGAATATG GAGGGCTTTCAATTCTAAGCTACCAAACCCTGTGGAATATG < 41bp 0.486891923134287 0.859141938617737 0.2326951 0.45472115 prediction 0.718283877235474 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177250621 chr1:177250622 synonymous SNV . 0 22 hPsi_associated_SNPs_20561 0 0 0 0 0 Nucleus 0.438712668355253 0.438718592944858 0 0 hPsi_site_14285 iPseU_CNN:0;iRNA_PseU:0 14286 chr19 8551095 8551095 1 + G A UCEC 8551094 + 8551074 8551114 41 AGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTGGG AGCCTCGAGCGCATGGGCCCTACCATGGGCCCGGCCCTGGG < 41bp 0.520213856033832 0.879340429843008 0.23761135 0.3328271 prediction 0.718253147618352 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551094 chr19:8551095 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_20562 0 0 1 0 0 Nucleus 0.438718593260143 0.438718592938883 0 0 hPsi_site_14286 iPseU_CNN:0;iRNA_PseU:0 14287 chr1 171756950 171756950 1 + G A LUSC 171756949 + 171756929 171756969 41 GACTGCAGCCCCTTGAGCGGTGACTATGTCATTGAGGATGT GACTGCAGCCCCTTGAGCGGTAACTATGTCATTGAGGATGT < 41bp 0.462168112459401 0.85912086195149 0.21878412 0.35562795 prediction 0.718241723902981 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171756949 chr1:171756950 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_20563 0 0 1 0 1 Ribosome 0.43871856603007 0.438718592995103 0 0 hPsi_site_14287 iPseU_CNN:0;iRNA_PseU:0 14288 chr6 41309601 41309601 1 + G A LUAD 41309600 + 41309580 41309620 41 CACAGACCCAGACCCAGAGCTGTGTGCCTCCCACTGCAGGA CACAGACCCAGACCCAGAGCTATGTGCCTCCCACTGCAGGA < 41bp 0.472937622497854 0.859106930058319 0.40413213 0.6864848 prediction 0.718213860116639 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41309600 chr6:41309601 nonsynonymous SNV 0.077 1 22 hPsi_associated_SNPs_20564 0 0 0 0 2 exosome 0.435069897755064 0.438660273312769 0.3729696 0 hPsi_site_14288 iPseU_CNN:0.3729696;iRNA_PseU:0 14289 chr12 6838425 6838425 1 + G A LAML 6838424 + 6838404 6838444 41 CGGCCCCAGTGTATCCCATATGCAGTGTTGCTGGAGGCTCT CGGCCCCAGTGTATCCCATATACAGTGTTGCTGGAGGCTCT < 41bp 0.526485448286198 0.885586799772462 0.3246178 0.34028757 prediction 0.718202702972529 Functional Gain - COPS7A ENSG00000111652 CDS Human protein_coding chr12:6838424 chr12:6838425 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_20565 0 0 1 5 0 Cytosol 0.438717926596871 0.438718174787335 0 0 hPsi_site_14289 iPseU_CNN:0;iRNA_PseU:0 14290 chr6 35773453 35773453 1 + G A UCEC 35773452 + 35773432 35773472 41 GCCTGCTGCCCTCACCATGGTGAAATTGCTGCCGGCCCAGG GCCTGCTGCCCTCACCATGGTAAAATTGCTGCCGGCCCAGG < 41bp 0.478829879309898 0.859089792369206 0.45709643 0.8056387 prediction 0.718179584738412 Functional Gain - LHFPL5 ENSG00000197753 CDS Human protein_coding chr6:35773452 chr6:35773453 synonymous SNV . 0 22 hPsi_associated_SNPs_20566 0 0 0 0 0 exosome 0.438718578672572 0.438718594163889 0.6112774 0 hPsi_site_14290 iPseU_CNN:0.6112774;iRNA_PseU:0 14291 chr5 149743745 149743745 1 + G A COAD 149743744 + 149743724 149743764 41 GCAAGCTAAGAAAACCCGTGTGTCAGACCCCATCAGCACCT GCAAGCTAAGAAAACCCGTGTATCAGACCCCATCAGCACCT < 41bp 0.523890904261906 0.882958203333148 0.4445931 0.68256533 prediction 0.718134598142485 Functional Gain - TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149743744 chr5:149743745 synonymous SNV . 0 22 hPsi_associated_SNPs_20567 0 0 1 0 2 Nucleus 0.438718646701317 0.438718581090973 0.36513066 0 hPsi_site_14291 iPseU_CNN:0.36513066;iRNA_PseU:0 14292 chr12 121659917 121659917 1 + G A rs25642 121659916 + 121659896 121659936 41 GATTCCAGATGCGACCACTGTGTGTAAATCAGATGCCAGCT GATTCCAGATGCGACCACTGTATGTAAATCAGATGCCAGCT < 41bp 0.469749947363502 0.859065075964236 0.35840204 0.30412647 prediction 0.718130151928473 Functional Gain - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659916 chr12:121659917 synonymous SNV . 0 22 hPsi_associated_SNPs_20568 0 0 1 1 2 Endoplasmic reticulum 0.438714522809097 0.438761699344235 0 0 hPsi_site_14292 iPseU_CNN:0;iRNA_PseU:0 14293 chr7 140373535 140373535 1 + G A BLCA 140373534 + 140373514 140373554 41 CCTCTGGCTCCACCTGCTTCTGAAAGCCACCGAGACCTCAG CCTCTGGCTCCACCTGCTTCTAAAAGCCACCGAGACCTCAG < 41bp 0.52098653743736 0.880030911048636 0.35187882 0.6528422 prediction 0.718088747222551 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373534 chr7:140373535 synonymous SNV . 0 22 hPsi_associated_SNPs_20569 0 0 1 0 0 Ribosome 0.438731445328117 0.438718702401356 0.3056844 0 hPsi_site_14293 iPseU_CNN:0.3056844;iRNA_PseU:0 14294 chr1 249141669 249141669 1 + G A BRCA 249141668 + 249141648 249141688 41 GCGCACAGGCGCACGCATGCTGGCCAGACCCTCTACATCTG GCGCACAGGCGCACGCATGCTAGCCAGACCCTCTACATCTG < 41bp 0.480275426220035 0.859031453853676 0.19289386 0.35962647 prediction 0.718062907707353 Functional Gain - ZNF672 ENSG00000171161 CDS Human protein_coding chr1:249141668 chr1:249141669 nonsynonymous SNV 0.174 1 22 hPsi_associated_SNPs_20570 0 0 1 0 0 Ribosome 0.438721222919498 0.438566470558754 0 0 hPsi_site_14294 iPseU_CNN:0;iRNA_PseU:0 14295 chr8 22865060 22865060 1 + C T UCEC 22865061 - 22865041 22865081 41 GTTCTCATCTAGCTCCCCCGTGTACAGGTACTTGAGGACAG GTTCTCATCTAGCTCCCCCGTATACAGGTACTTGAGGACAG < 41bp 0.50340991548544 0.862439880691433 0.1976912 0.26228943 prediction 0.718059930411986 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22865061 chr8:22865060 synonymous SNV . 0 22 hPsi_associated_SNPs_20571 0 0 0 0 0 cytosol 0.43871851458918 0.438718579544915 0 0 hPsi_site_14295 iPseU_CNN:0;iRNA_PseU:0 14296 chr5 140590120 140590120 1 + G A COAD 140590119 + 140590099 140590139 41 TTTGAGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACG TTTGAGCAGCGAGGCGCTGGTACGCGTGCTGGTGCTGGACG < 41bp 0.491405983813335 0.859024318346632 0.58543605 0.92657316 prediction 0.718048636693263 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140590119 chr5:140590120 synonymous SNV . 0 22 hPsi_associated_SNPs_20572 0 0 0 0 0 exosome 0.438555223952778 0.438185599270391 0.68227422 0 hPsi_site_14296 iPseU_CNN:0.68227422;iRNA_PseU:0 14297 chr8 103564089 103564089 1 + G A UCEC 103564088 + 103564068 103564108 41 ACTTGTATATGCACCCCTATTGCTGCTGTGACTTGCACCCA ACTTGTATATGCACCCCTATTACTGCTGTGACTTGCACCCA < 41bp 0.47803456382549 0.859018163090184 0.2616452 0.26710033 prediction 0.718036326180368 Functional Gain - ODF1 ENSG00000155087 CDS Human protein_coding chr8:103564088 chr8:103564089 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20573 0 0 0 0 0 unknown 0.438859112764257 0.438547794147828 0 0 hPsi_site_14297 iPseU_CNN:0;iRNA_PseU:0 14298 chr1 6615444 6615444 1 + G A rs35375392 6615443 + 6615423 6615463 41 ATCTGGCCAGCATGCTGCTCTGCACGGCTCGCCTGGTCGGC ATCTGGCCAGCATGCTGCTCTACACGGCTCGCCTGGTCGGC < 41bp 0.493253136869233 0.859012521473599 0.3495178 0.7861717 prediction 0.718025042947197 Functional Gain - TAS1R1 ENSG00000173662 CDS Human protein_coding chr1:6615443 chr1:6615444 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20574 0 0 0 0 0 membrane 0.438692690763223 0.438723936103108 0.5723434 0 hPsi_site_14298 iPseU_CNN:0.5723434;iRNA_PseU:0 14299 chr9 125486593 125486593 1 + G A LUAD 125486592 + 125486572 125486612 41 ATGTACTTCTTCATGGCATTTGGGAACACTGACAGCTACCT ATGTACTTCTTCATGGCATTTAGGAACACTGACAGCTACCT < 41bp 0.494811739649394 0.858998247653603 0.13645771 0.25204086 prediction 0.717996495307207 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125486592 chr9:125486593 nonsynonymous SNV 0.017 1 22 hPsi_associated_SNPs_20575 0 0 0 0 0 unknown 0.438799415547935 0.438656459733778 0 0 hPsi_site_14299 iPseU_CNN:0;iRNA_PseU:0 14300 chr3 148863259 148863259 1 + G A CESC 148863258 + 148863238 148863278 41 GGTTGTCAAATCTGTTGAATTGATGTCAGTCTACCAGTATC GGTTGTCAAATCTGTTGAATTAATGTCAGTCTACCAGTATC < 41bp 0.513281800339935 0.872278810826613 0.45801693 0.78386444 prediction 0.717994020973356 Functional Gain - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148863258 chr3:148863259 synonymous SNV . 0 22 hPsi_associated_SNPs_20576 0 0 1 0 1 Ribosome 0.438788013248899 0.438752144771964 0.56772888 0 hPsi_site_14300 iPseU_CNN:0.56772888;iRNA_PseU:0 14301 chr16 67702161 67702161 1 + G A ESCA 67702160 + 67702140 67702180 41 CAACTATTGCAACCCTGAGCTGAACCAGGCAGGGAAGGGGG CAACTATTGCAACCCTGAGCTAAACCAGGCAGGGAAGGGGG < 41bp 0.505621860496174 0.864615680443838 0.15346569 0.24835765 prediction 0.717987639895328 Functional Gain - C16orf86 ENSG00000159761 CDS Human protein_coding chr16:67702160 chr16:67702161 synonymous SNV . 0 22 hPsi_associated_SNPs_20577 0 0 0 0 1 exosome 0.43871860642454 0.438718593002797 0 0 hPsi_site_14301 iPseU_CNN:0;iRNA_PseU:0 14302 chr19 7619487 7619487 1 + G A SARC 7619486 + 7619466 7619506 41 TGGCTGGCCCAGCAGGAGGATGCACACCGTATCGTACTCTA TGGCTGGCCCAGCAGGAGGATACACACCGTATCGTACTCTA < 41bp 0.525505867611948 0.884498069624305 0.67275566 0.93492824 prediction 0.717984404024714 Functional Gain - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7619486 chr19:7619487 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_20578 0 0 0 0 1 Ribosome 0.438714594029293 0.438742095380856 0.52434516 0 hPsi_site_14302 iPseU_CNN:0.52434516;iRNA_PseU:0 14303 chr16 29996675 29996675 1 + G A UCEC 29996674 + 29996654 29996694 41 GGTGAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAGCT GGTGAACGGGAGGAGCACAGTACACGGCTGCAGCGGGAGCT < 41bp 0.476414295753556 0.858986917446032 0.32869133 0.57803166 prediction 0.717973834892064 Functional Gain - TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29996674 chr16:29996675 nonsynonymous SNV 0.907 0 22 hPsi_associated_SNPs_20579 0 0 1 0 0 Nucleus 0.438728993767549 0.438721653917085 0.15606332 0 hPsi_site_14303 iPseU_CNN:0.15606332;iRNA_PseU:0 14304 chr11 59564791 59564791 1 + G A STAD 59564790 + 59564770 59564810 41 CATTGTGCTAGTAGTTGTGTTGCTGGGCATTTTAGCATTGA CATTGTGCTAGTAGTTGTGTTACTGGGCATTTTAGCATTGA < 41bp 0.508170150071702 0.86715227997055 0.1446465 0.25106034 prediction 0.717964259797695 Functional Gain - STX3 ENSG00000166900 CDS Human protein_coding chr11:59564790 chr11:59564791 synonymous SNV . 0 22 hPsi_associated_SNPs_20580 0 0 1 0 1 Cytosol 0.435930280425445 0.438746376807356 0 0 hPsi_site_14304 iPseU_CNN:0;iRNA_PseU:0 14305 chr1 154296858 154296858 1 + G A CESC 154296857 + 154296837 154296877 41 TTGGTGGCTCTGCACCACCCTGAGGGCCCAGAGCCAGCTCA TTGGTGGCTCTGCACCACCCTAAGGGCCCAGAGCCAGCTCA < 41bp 0.511239607471935 0.870212508039487 0.3186609 0.49816138 prediction 0.717945801135103 Functional Gain - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154296857 chr1:154296858 nonsynonymous SNV 0.809 1 22 hPsi_associated_SNPs_20581 0 0 0 0 0 Ribosome 0.438718592602548 0.438720394364922 0 0 hPsi_site_14305 iPseU_CNN:0;iRNA_PseU:0 14306 chr19 43857896 43857896 1 + G A SKCM 43857895 + 43857875 43857915 41 GGTATTACTGCTGGCCCTCCTGGGGTTCATCCTCCCACTGC GGTATTACTGCTGGCCCTCCTAGGGTTCATCCTCCCACTGC < 41bp 0.507791256509864 0.866758298715494 0.14987007 0.3042742 prediction 0.717934084411259 Functional Gain - CD177 ENSG00000204936 CDS Human protein_coding chr19:43857895 chr19:43857896 synonymous SNV . 0 22 hPsi_associated_SNPs_20582 0 0 0 0 1 exosome 0.438718592995131 0.438718579508424 0 0 hPsi_site_14306 iPseU_CNN:0;iRNA_PseU:0 14307 chr2 27886769 27886769 1 + G A UCEC 27886768 + 27886748 27886788 41 GAAGGAGCGGATTTCGAAGTTGCACCGGTTGAGGATGGCTG GAAGGAGCGGATTTCGAAGTTACACCGGTTGAGGATGGCTG < 41bp 0.513886359941823 0.872826996610891 0.25476524 0.40479267 prediction 0.717881273338136 Functional Gain - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27886768 chr2:27886769 synonymous SNV . 0 22 hPsi_associated_SNPs_20583 0 0 1 0 0 nucleoplasm 0.438239587162267 0.439400975345958 0 0 hPsi_site_14307 iPseU_CNN:0;iRNA_PseU:0 14308 chr11 61490943 61490943 1 + G A STAD 61490942 + 61490922 61490962 41 CTGGGTAGTCATCCTCAGTGTGTGCATCACTGTCCTCTGCG CTGGGTAGTCATCCTCAGTGTATGCATCACTGTCCTCTGCG < 41bp 0.527617175184 0.886556220523661 0.33457392 0.75227094 prediction 0.717878090679323 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61490942 chr11:61490943 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_20584 0 0 0 0 1 Endoplasmic reticulum 0.438363963622218 0.438667994892482 0.50454188 0 hPsi_site_14308 iPseU_CNN:0.50454188;iRNA_PseU:0 14309 chr4 83826061 83826061 1 + G A UCS 83826060 + 83826040 83826080 41 AGAAAGCTGAAAAAAGGAGCTGTGCCTTCTGTTTCTCTATA AGAAAGCTGAAAAAAGGAGCTATGCCTTCTGTTTCTCTATA < 41bp 0.49320935401011 0.85892791718587 0.6057522 0.7939894 prediction 0.717855834371741 Functional Gain - THAP9 ENSG00000168152 CDS Human protein_coding chr4:83826060 chr4:83826061 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_20585 0 0 1 0 1 chromatin 0.438722333411714 0.43871792041087 0.3764744 0 hPsi_site_14309 iPseU_CNN:0.3764744;iRNA_PseU:0 14310 chr15 63579690 63579690 1 + G A GBM 63579689 + 63579669 63579709 41 GAATACCCTATCTGACTCCTTGGGGCCAGGCACAGTGGGCA GAATACCCTATCTGACTCCTTAGGGCCAGGCACAGTGGGCA < 41bp 0.524704052303785 0.883630778961696 0.14960364 0.23568279 prediction 0.717853453315822 Functional Gain - APH1B ENSG00000138613 CDS Human protein_coding chr15:63579689 chr15:63579690 synonymous SNV . 0 22 hPsi_associated_SNPs_20586 0 0 0 0 2 Endoplasmic reticulum 0.438897994417576 0.422873020667279 0 0 hPsi_site_14310 iPseU_CNN:0;iRNA_PseU:0 14311 chr12 48919660 48919660 1 + G A rs35367885 48919659 + 48919639 48919679 41 AGTCATTGTGCCCAAGATGCTGGAGAACCTCCTGTCACAGA AGTCATTGTGCCCAAGATGCTAGAGAACCTCCTGTCACAGA < 41bp 0.478380469668598 0.858914038617234 0.2437872 0.32719016 prediction 0.717828077234469 Functional Gain - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48919659 chr12:48919660 synonymous SNV . 0 22 hPsi_associated_SNPs_20587 0 0 0 0 0 unknown 0.438718534398454 0.438776835591801 0 0 hPsi_site_14311 iPseU_CNN:0;iRNA_PseU:0 14312 chr2 44547706 44547706 1 + C T LUSC 44547707 - 44547687 44547727 41 GGAAACAAAGCATCTATCTCTGAAAGCTGTTTGGCGATGAA GGAAACAAAGCATCTATCTCTAAAAGCTGTTTGGCGATGAA < 41bp 0.500952170337043 0.859862727080998 0.26964745 0.3433313 prediction 0.71782111348791 Functional Gain - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44547707 chr2:44547706 synonymous SNV . 0 22 hPsi_associated_SNPs_20588 0 0 1 1 0 exosome 0.438810753192468 0.438716859519921 0 0 hPsi_site_14312 iPseU_CNN:0;iRNA_PseU:0 14313 chr7 16823105 16823105 1 + G A UCEC 16823104 + 16823084 16823124 41 GACCCCCGCGCGAATCCTAGTGCATTCCTTTGATGAGAAAA GACCCCCGCGCGAATCCTAGTACATTCCTTTGATGAGAAAA < 41bp 0.509614519670256 0.868524706812348 0.3388418 0.6196857 prediction 0.717820374284185 Functional Gain - TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823104 chr7:16823105 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20589 0 0 1 0 1 Ribosome 0.438718592991504 0.43871859298171 0.2393714 0 hPsi_site_14313 iPseU_CNN:0.2393714;iRNA_PseU:0 14314 chrX 136649295 136649295 1 + G A rs769498242 136649294 + 136649274 136649314 41 GGCTCGGCGAGCAGCCTGCATGCTCCAGCTGGCATCCCCGA GGCTCGGCGAGCAGCCTGCATACTCCAGCTGGCATCCCCGA < 41bp 0.480086714595864 0.858902909025996 0.5236362 0.85299945 prediction 0.717805818051992 Functional Gain - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649294 chrX:136649295 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_20590 0 0 0 0 0 exosome 0.438711333023156 0.438825497050709 0.6587265 0 hPsi_site_14314 iPseU_CNN:0.6587265;iRNA_PseU:0 14315 chr7 92028033 92028033 1 + G A rs201537412 92028032 + 92028012 92028052 41 GGGTCAGAAGGTGTGAAGGATGTGGAACTGGTGCTGCCAGA GGGTCAGAAGGTGTGAAGGATATGGAACTGGTGCTGCCAGA < 41bp 0.509727332625179 0.868624274299429 0.44232774 0.62618107 prediction 0.7177938833485 Functional Gain - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92028032 chr7:92028033 nonsynonymous SNV 0.918 0 22 hPsi_associated_SNPs_20591 0 0 0 0 0 Cytosol 0.435561610858235 0.435374497850854 0.25236214 0 hPsi_site_14315 iPseU_CNN:0.25236214;iRNA_PseU:0 14316 chr22 24121532 24121532 1 + G A ESCA 24121531 + 24121511 24121551 41 GCCCGACCCATCTGATGGGCTGAGTGCCCGCAACCGACAGA GCCCGACCCATCTGATGGGCTAAGTGCCCGCAACCGACAGA < 41bp 0.523019195995393 0.881899602235002 0.2861954 0.80128545 prediction 0.717760812479219 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24121531 chr22:24121532 synonymous SNV . 0 22 hPsi_associated_SNPs_20592 0 0 0 0 2 Endoplasmic reticulum 0.437342638587793 0.43872067372772 0.6025709 0 hPsi_site_14316 iPseU_CNN:0.6025709;iRNA_PseU:0 14317 chr19 58004751 58004751 1 + G A PAAD 58004750 + 58004730 58004770 41 AGCCGTAATGCTCACCTCATTGAACACCAGAGAGTTCACAC AGCCGTAATGCTCACCTCATTAAACACCAGAGAGTTCACAC < 41bp 0.482348868923119 0.858865190392702 0.2836172 0.637441 prediction 0.717730380785404 Functional Gain - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58004750 chr19:58004751 nonsynonymous SNV 0.922 0 22 hPsi_associated_SNPs_20593 0 0 1 0 0 exosome 0.438159513007636 0.438703931446054 0.274882 0 hPsi_site_14317 iPseU_CNN:0.274882;iRNA_PseU:0 14318 chr11 123810609 123810609 1 + G A LUSC 123810608 + 123810588 123810628 41 AACCCTACCATTTCCTTTGGTGGATGCCTGACTCAACTCTT AACCCTACCATTTCCTTTGGTAGATGCCTGACTCAACTCTT < 41bp 0.504530771913014 0.863390720106891 0.2606994 0.64304686 prediction 0.717719896387753 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123810608 chr11:123810609 nonsynonymous SNV 0.724 1 22 hPsi_associated_SNPs_20594 0 0 0 0 0 exosome 0.438718218943203 0.438718584252505 0.28609372 0 hPsi_site_14318 iPseU_CNN:0.28609372;iRNA_PseU:0 14319 chr11 75282882 75282882 1 + G A rs585821 75282881 + 75282861 75282901 41 TGACAAGAACAAGGCCGACTTGTCACGCATGTCAGGCAAGA TGACAAGAACAAGGCCGACTTATCACGCATGTCAGGCAAGA < 41bp 0.490080656564872 0.858857373487866 0.24704304 0.3166039 prediction 0.717714746975731 Functional Gain - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75282881 chr11:75282882 synonymous SNV . 0 22 hPsi_associated_SNPs_20595 1 0 1 0 1 Ribosome 0.438782155762525 0.438816196884236 0 0 hPsi_site_14319 iPseU_CNN:0;iRNA_PseU:0 14320 chr13 76169090 76169090 1 + G A UCEC 76169089 + 76169069 76169109 41 AAAGTAGATCTTCATTTTATTGCATTAGTTCATGTAGATGG AAAGTAGATCTTCATTTTATTACATTAGTTCATGTAGATGG < 41bp 0.511480453074289 0.870323790723191 0.25868255 0.34416875 prediction 0.717686675297804 Functional Gain - UCHL3 ENSG00000118939 CDS Human protein_coding chr13:76169089 chr13:76169090 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20596 0 0 1 0 2 Ribosome 0.438723971647098 0.438716141298827 0 0 hPsi_site_14320 iPseU_CNN:0;iRNA_PseU:0 14321 chrX 99917271 99917271 1 + G A SKCM 99917270 + 99917250 99917290 41 AGCAGCCTGGGCACGCGTTGTGAGCTCTCCTGTGACCGGGG AGCAGCCTGGGCACGCGTTGTAAGCTCTCCTGTGACCGGGG < 41bp 0.529452844839401 0.888286788442026 0.43924025 0.72936726 prediction 0.71766788720525 Functional Gain - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99917270 chrX:99917271 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20597 0 0 0 0 2 nucleus 0.438718514052856 0.438630378536127 0.45873452 0 hPsi_site_14321 iPseU_CNN:0.45873452;iRNA_PseU:0 14322 chr19 579633 579633 1 + G A LIHC 579632 + 579612 579652 41 GGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGGAGT GGTGCTGAAGGAGGACGCGCTACCCGGCCAGAAAACGGAGT < 41bp 0.494759291459071 0.858827911482155 0.1892958 0.6566562 prediction 0.71765582296431 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:579632 chr19:579633 synonymous SNV . 0 22 hPsi_associated_SNPs_20598 0 0 1 0 1 Ribosome 0.43871859299514 0.438718592999039 0.3133124 0 hPsi_site_14322 iPseU_CNN:0.3133124;iRNA_PseU:0 14323 chr22 39918553 39918553 1 + G A BLCA 39918552 + 39918532 39918572 41 GGCCAAGGAGATCCAGTACCTGAAAGATTTGATAGAAGAGG GGCCAAGGAGATCCAGTACCTAAAAGATTTGATAGAAGAGG < 41bp 0.496135012878139 0.858819253032503 0.3072281 0.36746186 prediction 0.717638506065007 Functional Gain - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918552 chr22:39918553 synonymous SNV . 0 22 hPsi_associated_SNPs_20599 0 0 0 0 0 Ribosome 0.438718592995102 0.43871859299786 0 0 hPsi_site_14323 iPseU_CNN:0;iRNA_PseU:0 14324 chr17 79671701 79671701 1 + G A SKCM 79671700 + 79671680 79671720 41 GGATGTCGGGCTTGTGCCGATGGGTGGTGTGATGTCTGGGG GGATGTCGGGCTTGTGCCGATAGGTGGTGTGATGTCTGGGG < 41bp 0.468329840749356 0.858801834509909 0.26655063 0.54278225 prediction 0.717603669019817 Functional Gain - MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671700 chr17:79671701 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_20600 0 0 1 0 2 Ribosome 0.438718593983671 0.43870360512532 0.0855645 0 hPsi_site_14324 iPseU_CNN:0.0855645;iRNA_PseU:0 14325 chr9 88628649 88628649 1 + G A LGG 88628648 + 88628628 88628668 41 TAATAGGCAGAGAAGGTTGATGCAGCGCTTCACACCATGCT TAATAGGCAGAGAAGGTTGATACAGCGCTTCACACCATGCT < 41bp 0.523106869256902 0.88190688508288 0.33747292 0.5479957 prediction 0.717600031651957 Functional Gain - NAA35 ENSG00000135040 CDS Human protein_coding chr9:88628648 chr9:88628649 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20601 0 0 1 0 1 Cytosol 0.438718866309883 0.438719002463892 0.0959913999999999 0 hPsi_site_14325 iPseU_CNN:0.0959913999999999;iRNA_PseU:0 14326 chr2 138758542 138758542 1 + G A rs146100323 138758541 + 138758521 138758561 41 AGGCTCAATACCCAGGAGTTTGTATCAACAATGAAGTTGTT AGGCTCAATACCCAGGAGTTTATATCAACAATGAAGTTGTT < 41bp 0.490066473507977 0.858793491349372 0.22954023 0.35765028 prediction 0.717586982698743 Functional Gain - HNMT ENSG00000150540 CDS Human protein_coding chr2:138758541 chr2:138758542 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_20602 0 0 0 0 2 Cytosol 0.438704658222248 0.438717507809091 0 0 hPsi_site_14326 iPseU_CNN:0;iRNA_PseU:0 14327 chr22 29886371 29886371 1 + G A SKCM 29886370 + 29886350 29886390 41 GAAGGAGGCTCCTGCCAAGGTGGAGGTGAAGGAAGACGCTA GAAGGAGGCTCCTGCCAAGGTAGAGGTGAAGGAAGACGCTA < 41bp 0.48033057655988 0.858788005494311 0.24294439 0.36370537 prediction 0.717576010988622 Functional Gain - NEFH ENSG00000100285 CDS Human protein_coding chr22:29886370 chr22:29886371 synonymous SNV . 0 22 hPsi_associated_SNPs_20603 0 0 1 0 0 cytosol 0.43871859299509 0.438718596252933 0 0 hPsi_site_14327 iPseU_CNN:0;iRNA_PseU:0 14328 chrX 47101047 47101047 1 + G A UCEC 47101046 + 47101026 47101066 41 GCATGAGGACCTTAATCGGGTGAAGAAGAAGGAGTATGTGG GCATGAGGACCTTAATCGGGTAAAGAAGAAGGAGTATGTGG < 41bp 0.465226462347258 0.858775091718181 0.33262956 0.49169394 prediction 0.717550183436362 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101046 chrX:47101047 synonymous SNV . 0 22 hPsi_associated_SNPs_20604 0 0 1 0 1 cytosol 0.438718592523405 0.438718592994946 0 0 hPsi_site_14328 iPseU_CNN:0;iRNA_PseU:0 14329 chr11 702971 702971 1 + G A BLCA 702970 + 702950 702990 41 AGGGGCAACCTGACAGAGGCTGAGAGGCCGCTGGCCGCCAG AGGGGCAACCTGACAGAGGCTAAGAGGCCGCTGGCCGCCAG < 41bp 0.484640669994437 0.85877080164048 0.2833215 0.7848321 prediction 0.71754160328096 Functional Gain - TMEM80 ENSG00000177042 CDS Human protein_coding chr11:702970 chr11:702971 nonsynonymous SNV 0.335 4 22 hPsi_associated_SNPs_20605 0 0 0 0 1 Endoplasmic reticulum 0.438722473065072 0.438729592958774 0.5696642 0 hPsi_site_14329 iPseU_CNN:0.5696642;iRNA_PseU:0 14330 chr15 40866103 40866103 1 + G A LUAD 40866102 + 40866082 40866122 41 GGCCAAACAGAGCCTGGATGTGCTAGATCTCTGTGAGGGTG GGCCAAACAGAGCCTGGATGTACTAGATCTCTGTGAGGGTG < 41bp 0.47643195505232 0.858766811781131 0.4995538 0.84915966 prediction 0.717533623562261 Functional Gain - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40866102 chr15:40866103 synonymous SNV . 0 22 hPsi_associated_SNPs_20606 0 0 1 0 0 Cytosol 0.438718632182147 0.438717254056959 0.69831932 0 hPsi_site_14330 iPseU_CNN:0.69831932;iRNA_PseU:0 14331 chr19 16962258 16962258 1 + G A COAD 16962257 + 16962237 16962277 41 GCCGTGCGAGATGCACAGCGTGCAGAAGAACGAGCACGACA GCCGTGCGAGATGCACAGCGTACAGAAGAACGAGCACGACA < 41bp 0.458666819796623 0.858764274444034 0.49487865 0.8789755 prediction 0.717528548888068 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16962257 chr19:16962258 synonymous SNV . 0 22 hPsi_associated_SNPs_20607 0 0 0 0 2 Cytosol 0.438575627801843 0.432822061685983 0.757951 0 hPsi_site_14331 iPseU_CNN:0.757951;iRNA_PseU:0 14332 chr11 123894185 123894185 1 + G A UCEC 123894184 + 123894164 123894204 41 CTCAGTGGCTCTCTGCACTCTGCTGTCCAGACCATATTGAC CTCAGTGGCTCTCTGCACTCTACTGTCCAGACCATATTGAC < 41bp 0.511340137619504 0.870093022163273 0.23551664 0.6594569 prediction 0.717505769087538 Functional Gain - OR10G9 ENSG00000236981 CDS Human protein_coding chr11:123894184 chr11:123894185 nonsynonymous SNV 0.966 1 22 hPsi_associated_SNPs_20608 0 0 0 0 0 unknown 0.438395845413562 0.439217513103052 0.3189138 0 hPsi_site_14332 iPseU_CNN:0.3189138;iRNA_PseU:0 14333 chr1 203455978 203455978 1 + G A UCEC 203455977 + 203455957 203455997 41 TCCCGCTGGACCTCATGATGTGCTTCCGCCTCCTGCAGTCC TCCCGCTGGACCTCATGATGTACTTCCGCCTCCTGCAGTCC < 41bp 0.519310997653857 0.878062829162427 0.36658162 0.7778829 prediction 0.717503663017141 Functional Gain - PRELP ENSG00000188783 CDS Human protein_coding chr1:203455977 chr1:203455978 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20609 0 0 1 0 0 exosome 0.438719885024812 0.438685437674608 0.5557658 0 hPsi_site_14333 iPseU_CNN:0.5557658;iRNA_PseU:0 14334 chr1 24120368 24120368 1 + G A READ 24120367 + 24120347 24120387 41 AAGGTTTGACCTGATGGGGCTGAGTCCAGATGCCCCAGAGG AAGGTTTGACCTGATGGGGCTAAGTCCAGATGCCCCAGAGG < 41bp 0.494985264124216 0.858744851343194 0.12824091 0.41098362 prediction 0.717489702686388 Functional Gain - LYPLA2 ENSG00000011009 CDS Human protein_coding chr1:24120367 chr1:24120368 synonymous SNV . 0 22 hPsi_associated_SNPs_20610 0 0 0 0 2 Ribosome 0.438718596310306 0.438718591051926 0 0 hPsi_site_14334 iPseU_CNN:0;iRNA_PseU:0 14335 chr1 110038827 110038827 1 + G A ESCA 110038826 + 110038806 110038846 41 GCCCGTCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA GCCCGTCTATCCAGCCCTGGTAATCATGCACCAGATTTCCA < 41bp 0.485585216671051 0.858743275100782 0.20848554 0.43183377 prediction 0.717486550201563 Functional Gain - CYB561D1 ENSG00000174151 CDS Human protein_coding chr1:110038826 chr1:110038827 synonymous SNV . 0 22 hPsi_associated_SNPs_20611 0 0 0 0 0 Endoplasmic reticulum 0.438816202199515 0.438718584651029 0 0 hPsi_site_14335 iPseU_CNN:0;iRNA_PseU:0 14336 chr9 136402603 136402603 1 + G A SKCM 136402602 + 136402582 136402622 41 GGTGGGGGGAGTGGACCAAGTGGACGGCGTGTTCCCGCAGT GGTGGGGGGAGTGGACCAAGTAGACGGCGTGTTCCCGCAGT < 41bp 0.472819172540267 0.858742606084645 0.26033926 0.6404986 prediction 0.717485212169291 Functional Gain - ADAMTSL2 ENSG00000197859 CDS Human protein_coding chr9:136402602 chr9:136402603 stopgain 1.000 0 22 hPsi_associated_SNPs_20612 0 0 0 0 2 exosome 0.438719269613295 0.438723928846984 0.2809972 0 hPsi_site_14336 iPseU_CNN:0.2809972;iRNA_PseU:0 14337 chr3 157155435 157155435 1 + G A COAD 157155434 + 157155414 157155454 41 GCGGGGCGAGCTGCAGAGGCTGCGGGAGGAGCTGGGCCGGC GCGGGGCGAGCTGCAGAGGCTACGGGAGGAGCTGGGCCGGC < 41bp 0.520885216089809 0.879627067917007 0.36022756 0.6158897 prediction 0.717483703654396 Functional Gain - PTX3 ENSG00000163661 CDS Human protein_coding chr3:157155434 chr3:157155435 synonymous SNV . 0 22 hPsi_associated_SNPs_20613 0 0 0 0 0 exosome 0.438718593043242 0.438718604924868 0.2317794 0 hPsi_site_14337 iPseU_CNN:0.2317794;iRNA_PseU:0 14338 chr4 156723600 156723600 1 + G A KIRC 156723599 + 156723579 156723619 41 ACCATCCTCTTTAGTGGCATTGTGGGCTTCAATGCTTTCTG ACCATCCTCTTTAGTGGCATTATGGGCTTCAATGCTTTCTG < 41bp 0.520738417581023 0.87946690800202 0.381948 0.6035416 prediction 0.717456980841994 Functional Gain - GUCY1B3 ENSG00000061918 CDS Human protein_coding chr4:156723599 chr4:156723600 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20614 0 0 1 0 1 Ribosome 0.438899656500378 0.438733888543331 0.2070832 0 hPsi_site_14338 iPseU_CNN:0.2070832;iRNA_PseU:0 14339 chr20 43938271 43938271 1 + G A COAD 43938270 + 43938250 43938290 41 AGGTGCCTGCAGCAACAGTGTGAACAGACTGTGCGGATCCT AGGTGCCTGCAGCAACAGTGTAAACAGACTGTGCGGATCCT < 41bp 0.465986126815792 0.858696085889923 0.2951854 0.56888413 prediction 0.717392171779846 Functional Gain - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43938270 chr20:43938271 nonsynonymous SNV 0.947 2 22 hPsi_associated_SNPs_20615 0 0 0 0 2 unknown 0.436737486871635 0.441063025876075 0.13776826 0 hPsi_site_14339 iPseU_CNN:0.13776826;iRNA_PseU:0 14340 chr5 78416224 78416224 1 + G A LUAD 78416223 + 78416203 78416243 41 ATCGCCCGACAAGTGGCTGATGAAGGAGATGCTTTGGTAGC ATCGCCCGACAAGTGGCTGATAAAGGAGATGCTTTGGTAGC < 41bp 0.472951751911172 0.858693978413149 0.22658905 0.297108 prediction 0.717387956826298 Functional Gain - BHMT ENSG00000145692 CDS Human protein_coding chr5:78416223 chr5:78416224 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_20616 0 0 0 0 1 exosome 0.438713080013219 0.438718959289829 0 0 hPsi_site_14340 iPseU_CNN:0;iRNA_PseU:0 14341 chr19 45525436 45525436 1 + G A PRAD 45525435 + 45525415 45525455 41 CACCGACGGCATCTGCAGGGTGCGGCTCCGGCCTCACGTCA CACCGACGGCATCTGCAGGGTACGGCTCCGGCCTCACGTCA < 41bp 0.523299272311672 0.881984119946796 0.61578506 0.94320285 prediction 0.717369695270248 Functional Gain - RELB ENSG00000104856 CDS Human protein_coding chr19:45525435 chr19:45525436 synonymous SNV . 0 22 hPsi_associated_SNPs_20617 0 0 0 0 1 Cytosol 0.438718593533664 0.438718705940109 0.65483558 0 hPsi_site_14341 iPseU_CNN:0.65483558;iRNA_PseU:0 14342 chr2 102626100 102626100 1 + G A LUSC 102626099 + 102626079 102626119 41 GGAAGGGGAGCCTGTAGCCCTGAGGTGCCCCCAGGTGCCCT GGAAGGGGAGCCTGTAGCCCTAAGGTGCCCCCAGGTGCCCT < 41bp 0.530961822673221 0.889645737788293 0.25491673 0.2910534 prediction 0.717367830230145 Functional Gain - IL1R2 ENSG00000115590 CDS Human protein_coding chr2:102626099 chr2:102626100 synonymous SNV . 0 22 hPsi_associated_SNPs_20618 0 0 0 0 1 Endoplasmic reticulum 0.438718592995462 0.438718594600779 0 0 hPsi_site_14342 iPseU_CNN:0;iRNA_PseU:0 14343 chr2 198570253 198570253 1 + G A rs200490327 198570252 + 198570232 198570272 41 AGTGCCGGCGATGATGCTTGTGATGTGCGCGCCTACTTCAC AGTGCCGGCGATGATGCTTGTAATGTGCGCGCCTACTTCAC < 41bp 0.505846928678011 0.864529731656066 0.23567474 0.65964925 prediction 0.71736560595611 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570252 chr2:198570253 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_20619 1 0 1 0 0 Ribosome 0.438714642101733 0.438711393037756 0.3192985 0 hPsi_site_14343 iPseU_CNN:0.3192985;iRNA_PseU:0 14344 chr2 27353480 27353480 1 + G A rs147790643 27353479 + 27353459 27353499 41 GGGTGGCCACATCGGCTTCCTGGAAGGGCTGCTCCCGTGGC GGGTGGCCACATCGGCTTCCTAGAAGGGCTGCTCCCGTGGC < 41bp 0.47884448983809 0.858661174659383 0.21147695 0.38907504 prediction 0.717322349318765 Functional Gain - ABHD1 ENSG00000143994 CDS Human protein_coding chr2:27353479 chr2:27353480 synonymous SNV . 0 22 hPsi_associated_SNPs_20620 0 0 1 0 1 exosome 0.438718299888585 0.438718592424615 0 0 hPsi_site_14344 iPseU_CNN:0;iRNA_PseU:0 14345 chr19 44585189 44585189 1 + G A LUAD 44585188 + 44585168 44585208 41 GAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACCGA GAGGCAGTGACCTTCAAGGATATGGCTGTGGTCTTCACCGA < 41bp 0.473888708898908 0.858648887795218 0.30278838 0.7098286 prediction 0.717297775590436 Functional Gain - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44585188 chr19:44585189 nonsynonymous SNV 0.444 3 22 hPsi_associated_SNPs_20621 0 0 0 0 1 exosome 0.4387185929951 0.438718592995102 0.4196572 0 hPsi_site_14345 iPseU_CNN:0.4196572;iRNA_PseU:0 14346 chr4 96762141 96762141 1 + G A SKCM 96762140 + 96762120 96762160 41 TGGAAAGGGGCCCATACTGATGGAGCTGCAAACCTACCGTT TGGAAAGGGGCCCATACTGATAGAGCTGCAAACCTACCGTT < 41bp 0.488926862366467 0.858648289364112 0.34933478 0.43300062 prediction 0.717296578728225 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96762140 chr4:96762141 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_20622 0 0 0 0 0 unknown 0.438707275771061 0.438718591504216 0 0 hPsi_site_14346 iPseU_CNN:0;iRNA_PseU:0 14347 chr20 62187101 62187101 1 + G A SKCM 62187100 + 62187080 62187120 41 CTGGACCAGGAGGAGGCAGATGACCAGCAGCTGCTGGAACC CTGGACCAGGAGGAGGCAGATAACCAGCAGCTGCTGGAACC < 41bp 0.490741315942682 0.858645152346277 0.18378901 0.23399773 prediction 0.717290304692554 Functional Gain - FNDC11 ENSG00000125531 CDS Human protein_coding chr20:62187100 chr20:62187101 nonsynonymous SNV 0.855 0 22 hPsi_associated_SNPs_20623 0 0 0 0 1 exosome 0.438718593089432 0.438718592995102 0 0 hPsi_site_14347 iPseU_CNN:0;iRNA_PseU:0 14348 chr15 30927752 30927752 1 + G A COAD 30927751 + 30927731 30927771 41 TTGGGTATTGATGGTCTCTGTGCTACTCCATCACTGGAAGG TTGGGTATTGATGGTCTCTGTACTACTCCATCACTGGAAGG < 41bp 0.481098279532921 0.858644878912795 0.34315878 0.8843748 prediction 0.71728975782559 Functional Gain - ARHGAP11B ENSG00000187951 CDS Human protein_coding chr15:30927751 chr15:30927752 synonymous SNV . 0 22 hPsi_associated_SNPs_20624 0 0 1 0 2 chromatin 0.438383933118874 0.438734544809458 0.7687496 0 hPsi_site_14348 iPseU_CNN:0.7687496;iRNA_PseU:0 14349 chr3 128993768 128993768 1 + G A BLCA 128993767 + 128993747 128993787 41 GCCTGGGATGAGGTAGGGGATGAATTTGAGAAGGAGGAAAC GCCTGGGATGAGGTAGGGGATAAATTTGAGAAGGAGGAAAC < 41bp 0.472841989062075 0.858643606343824 0.39119858 0.7426186 prediction 0.717287212687648 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128993767 chr3:128993768 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20625 0 0 1 0 2 Nucleus 0.438718582497163 0.438718647428629 0.4852372 0 hPsi_site_14349 iPseU_CNN:0.4852372;iRNA_PseU:0 14350 chr13 52439679 52439679 1 + G A LUAD 52439678 + 52439658 52439698 41 AAAGGCTTTTCGCGAAGAGATGAAAATTTTTCGTGAAAAAA AAAGGCTTTTCGCGAAGAGATAAAAATTTTTCGTGAAAAAA < 41bp 0.489417600303289 0.858640001191333 0.17794377 0.25703105 prediction 0.717280002382667 Functional Gain - CCDC70 ENSG00000123171 CDS Human protein_coding chr13:52439678 chr13:52439679 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20626 0 0 0 0 0 unknown 0.438689986346882 0.438708936356336 0 0 hPsi_site_14350 iPseU_CNN:0;iRNA_PseU:0 14351 chr9 127996036 127996036 1 + G A COAD 127996035 + 127996015 127996055 41 GACGATTGGACCATTCCATGTGTATCATTCCATGGCCAGTG GACGATTGGACCATTCCATGTATATCATTCCATGGCCAGTG < 41bp 0.48421140069481 0.858637156800061 0.306161 0.56865203 prediction 0.717274313600121 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996035 chr9:127996036 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20627 0 0 1 2 1 Cytosol 0.43871568286019 0.438711012372006 0.13730406 0 hPsi_site_14351 iPseU_CNN:0.13730406;iRNA_PseU:0 14352 chr12 4763547 4763547 1 + G A CESC 4763546 + 4763526 4763566 41 CTCATGCCTCATGGGAAAGGTGGACGTTCCTCAGTCAGTGG CTCATGCCTCATGGGAAAGGTAGACGTTCCTCAGTCAGTGG < 41bp 0.474475087830206 0.858623130704694 0.26711196 0.68342555 prediction 0.717246261409388 Functional Gain - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4763546 chr12:4763547 nonsynonymous SNV 0.987 5 22 hPsi_associated_SNPs_20628 0 0 1 0 2 Ribosome 0.438718521543794 0.438732589999184 0.3668511 0 hPsi_site_14352 iPseU_CNN:0.3668511;iRNA_PseU:0 14353 chr3 58486735 58486735 1 + G A GBM 58486734 + 58486714 58486754 41 TACAACGTCTCTCACCACATTGACGCGTTACCCGGATTCCA TACAACGTCTCTCACCACATTAACGCGTTACCCGGATTCCA < 41bp 0.491973448298068 0.858621681959784 0.20495895 0.23830417 prediction 0.717243363919568 Functional Gain - KCTD6 ENSG00000168301 CDS Human protein_coding chr3:58486734 chr3:58486735 synonymous SNV . 0 22 hPsi_associated_SNPs_20629 0 0 1 0 1 exosome 0.438718217084657 0.438682469997464 0 0 hPsi_site_14353 iPseU_CNN:0;iRNA_PseU:0 14354 chr9 139744496 139744496 1 + G A CESC 139744495 + 139744475 139744515 41 CGACAAAGTGTCGGGCGACATGCAGAAGCAAGGCTGCGACT CGACAAAGTGTCGGGCGACATACAGAAGCAAGGCTGCGACT < 41bp 0.520123803987234 0.878735021371567 0.31303537 0.34233105 prediction 0.717222434768666 Functional Gain - PHPT1 ENSG00000054148 CDS Human protein_coding chr9:139744495 chr9:139744496 nonsynonymous SNV 0.641 0 22 hPsi_associated_SNPs_20630 0 0 1 0 2 Ribosome 0.438717407738291 0.438718651958431 0 0 hPsi_site_14354 iPseU_CNN:0;iRNA_PseU:0 14355 chr19 17000638 17000638 1 + G A SKCM 17000637 + 17000617 17000657 41 CTGATGAACCTCGCGGCTGCTGACCTCCTGCTGGCCCTGGC CTGATGAACCTCGCGGCTGCTAACCTCCTGCTGGCCCTGGC < 41bp 0.479258485807894 0.858595887878961 0.23181486 0.46641836 prediction 0.717191775757922 Functional Gain - F2RL3 ENSG00000127533 CDS Human protein_coding chr19:17000637 chr19:17000638 nonsynonymous SNV 0.030 4 22 hPsi_associated_SNPs_20631 0 0 0 0 0 chromatin 0.438718308228489 0.438716113120487 0 0 hPsi_site_14355 iPseU_CNN:0;iRNA_PseU:0 14356 chr4 3449688 3449688 1 + G A BRCA 3449687 + 3449667 3449707 41 CGCAGTTCGTGCAGCCCATCTGCCTGCCCGAGCCCGGCAGC CGCAGTTCGTGCAGCCCATCTACCTGCCCGAGCCCGGCAGC < 41bp 0.522727688854431 0.881311084171743 0.3058592 0.8478086 prediction 0.717166790634624 Functional Gain - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3449687 chr4:3449688 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_20632 0 0 0 0 1 cytosol 0.438721189480966 0.439085069621184 0.6956172 0 hPsi_site_14356 iPseU_CNN:0.6956172;iRNA_PseU:0 14357 chr16 78064399 78064399 1 + G A SKCM 78064398 + 78064378 78064418 41 CTACCTTGCTTCAGAAGGTTTGAAGCATTTCCATGAGGCCA CTACCTTGCTTCAGAAGGTTTAAAGCATTTCCATGAGGCCA < 41bp 0.510519337697123 0.869078347084052 0.32175034 0.5521727 prediction 0.717118018773858 Functional Gain - CLEC3A ENSG00000166509 CDS Human protein_coding chr16:78064398 chr16:78064399 synonymous SNV . 0 22 hPsi_associated_SNPs_20633 0 0 0 0 1 unknown 0.438802397021854 0.438660828326251 0.1043454 0 hPsi_site_14357 iPseU_CNN:0.1043454;iRNA_PseU:0 14358 chr1 204095004 204095004 1 + G A SKCM 204095003 + 204094983 204095023 41 CAGCCCGCAGGCTGGCCAGGTGCAGATGAGCTCCTCAGATG CAGCCCGCAGGCTGGCCAGGTACAGATGAGCTCCTCAGATG < 41bp 0.521318450008796 0.879872698726914 0.30059966 0.78569376 prediction 0.717108497436236 Functional Gain - SOX13 ENSG00000143842 CDS Human protein_coding chr1:204095003 chr1:204095004 synonymous SNV . 0 22 hPsi_associated_SNPs_20634 0 0 1 0 1 nucleus 0.443697056052458 0.446725871081147 0.57138752 0 hPsi_site_14358 iPseU_CNN:0.57138752;iRNA_PseU:0 14359 chr11 57367733 57367733 1 + G A BRCA 57367732 + 57367712 57367752 41 ACAGAGGCCGTGTTGGGGGATGCTTTGGTAGATTTCTCCCT ACAGAGGCCGTGTTGGGGGATACTTTGGTAGATTTCTCCCT < 41bp 0.466294119392845 0.858553648128772 0.34457785 0.5164475 prediction 0.717107296257544 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57367732 chr11:57367733 nonsynonymous SNV 0.178 5 22 hPsi_associated_SNPs_20635 0 0 0 0 0 Endoplasmic reticulum 0.435960229735558 0.438572877730276 0.0328949999999999 0 hPsi_site_14359 iPseU_CNN:0.0328949999999999;iRNA_PseU:0 14360 chr10 72289750 72289750 1 + G A GBM 72289749 + 72289729 72289769 41 CAGGTGCAGGGTGGGCTCACTGTGTTCGGCATGGGACAGCC CAGGTGCAGGGTGGGCTCACTATGTTCGGCATGGGACAGCC < 41bp 0.469013813665653 0.858547205889341 0.27858126 0.32662216 prediction 0.717094411778682 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72289749 chr10:72289750 nonsynonymous SNV 0.757 4 22 hPsi_associated_SNPs_20636 0 0 0 0 0 Ribosome 0.438714454501767 0.438731846222405 0 0 hPsi_site_14360 iPseU_CNN:0;iRNA_PseU:0 14361 chr14 75936049 75936049 1 + G A rs145604845 75936048 + 75936028 75936068 41 GAAGACCCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGC GAAGACCCAGATTGAGGAGCTAAAGCAGGAGCGGCAGCAGC < 41bp 0.479725462411353 0.858545885713587 0.27594793 0.47639254 prediction 0.717091771427175 Functional Gain - JDP2 ENSG00000140044 CDS Human protein_coding chr14:75936048 chr14:75936049 synonymous SNV . 0 22 hPsi_associated_SNPs_20637 0 0 0 0 1 Ribosome 0.438717665233471 0.438735994752898 0 0 hPsi_site_14361 iPseU_CNN:0;iRNA_PseU:0 14362 chr7 98254433 98254433 1 + G A SKCM 98254432 + 98254412 98254452 41 GCAGGCCAACGAGATCGTGCTGATCGAGTGGGGCAACAACC GCAGGCCAACGAGATCGTGCTAATCGAGTGGGGCAACAACC < 41bp 0.471764831897467 0.858543543039933 0.31036502 0.70760834 prediction 0.717087086079865 Functional Gain - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98254432 chr7:98254433 synonymous SNV . 0 22 hPsi_associated_SNPs_20638 0 0 0 0 1 exosome 0.437069649636958 0.438726475827381 0.41521668 0 hPsi_site_14362 iPseU_CNN:0.41521668;iRNA_PseU:0 14363 chrX 55479393 55479393 1 + G A LUAD 55479392 + 55479372 55479412 41 AAAGACTGGCCTTGTAATTATGACTGGGATTCGGACGATGA AAAGACTGGCCTTGTAATTATAACTGGGATTCGGACGATGA < 41bp 0.498474212140161 0.858541951253161 0.2822921 0.35702533 prediction 0.717083902506322 Functional Gain - MAGEH1 ENSG00000187601 CDS Human protein_coding chrX:55479392 chrX:55479393 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_20639 0 0 0 0 0 exosome 0.438716364725444 0.43871857141571 0 0 hPsi_site_14363 iPseU_CNN:0;iRNA_PseU:0 14364 chr19 16238297 16238297 1 + G A LUSC 16238296 + 16238276 16238316 41 ACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTT ACTCGGGAACAAGTGTGATGTAAATGACAAGAGACAAGTTT < 41bp 0.53032934098944 0.888869811854468 0.35464913 0.5472489 prediction 0.717080941730057 Functional Gain - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16238296 chr19:16238297 synonymous SNV . 0 22 hPsi_associated_SNPs_20640 0 0 1 0 2 Ribosome 0.438717534758685 0.438718507324184 0.0944978000000001 0 hPsi_site_14364 iPseU_CNN:0.0944978000000001;iRNA_PseU:0 14365 chr14 77934431 77934431 1 + G A rs76737755 77934430 + 77934410 77934450 41 TTTTTTTTCCCTGCAGCTGGTGCAGGCCTTTACCCATGCTC TTTTTTTTCCCTGCAGCTGGTACAGGCCTTTACCCATGCTC < 41bp 0.508850456101005 0.867386003627129 0.2707255 0.5885193 prediction 0.717071095052248 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77934430 chr14:77934431 synonymous SNV . 0 22 hPsi_associated_SNPs_20641 0 0 1 0 2 Ribosome 0.438716579860924 0.438715170970865 0.1770386 0 hPsi_site_14365 iPseU_CNN:0.1770386;iRNA_PseU:0 14366 chr17 38610218 38610218 1 + G A LIHC 38610217 + 38610197 38610237 41 GAGCGAGCTGCACCGGGCGCTGGAGCGGCTGGCCGCTTCAC GAGCGAGCTGCACCGGGCGCTAGAGCGGCTGGCCGCTTCAC < 41bp 0.466539503402426 0.858527220090347 0.18486333 0.41703483 prediction 0.717054440180695 Functional Gain - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610217 chr17:38610218 synonymous SNV . 0 22 hPsi_associated_SNPs_20642 0 0 1 0 2 Nucleus 0.438720343523066 0.434519913891442 0 0 hPsi_site_14366 iPseU_CNN:0;iRNA_PseU:0 14367 chr16 3021362 3021362 1 + G A GBM 3021361 + 3021341 3021381 41 CCCTGGACATGTGTGGGGTCTGCCTTGTCAACACCCTTGGT CCCTGGACATGTGTGGGGTCTACCTTGTCAACACCCTTGGT < 41bp 0.513851134862456 0.872371021939737 0.15530935 0.31560814 prediction 0.717039774154562 Functional Gain - PAQR4 ENSG00000162073 CDS Human protein_coding chr16:3021361 chr16:3021362 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20643 0 0 1 0 2 Ribosome 0.438613788305642 0.439695783805475 0 0 hPsi_site_14367 iPseU_CNN:0;iRNA_PseU:0 14368 chr22 36661819 36661819 1 + G A SKCM 36661818 + 36661798 36661838 41 GTCACTGAGCCAATCTCAGCTGAAAGCGGTGAACAGGTGGA GTCACTGAGCCAATCTCAGCTAAAAGCGGTGAACAGGTGGA < 41bp 0.477791870620758 0.85851616753726 0.2508862 0.4669681 prediction 0.71703233507452 Functional Gain - APOL1 ENSG00000100342 CDS Human protein_coding chr22:36661818 chr22:36661819 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20644 0 0 1 0 0 Nucleus 0.435897967851694 0.439736063665128 0 0 hPsi_site_14368 iPseU_CNN:0;iRNA_PseU:0 14369 chr22 30077536 30077536 1 + G A GBM 30077535 + 30077515 30077555 41 GGAGACAGCTCTGGATATTCTGCACAATGAGAACTCCGACA GGAGACAGCTCTGGATATTCTACACAATGAGAACTCCGACA < 41bp 0.501929403231168 0.86044200244328 0.25483567 0.3738234 prediction 0.717025198424224 Functional Gain - NF2 ENSG00000186575 CDS Human protein_coding chr22:30077535 chr22:30077536 synonymous SNV . 0 22 hPsi_associated_SNPs_20645 0 0 1 0 1 Ribosome 0.438759619124206 0.438989041930159 0 0 hPsi_site_14369 iPseU_CNN:0;iRNA_PseU:0 14370 chr5 118728896 118728896 1 + G A UCEC 118728895 + 118728875 118728915 41 AAATGAATGCAGAGAGATGCTGCACCAAATCATTCAGCGCC AAATGAATGCAGAGAGATGCTACACCAAATCATTCAGCGCC < 41bp 0.513100673075752 0.871604156176627 0.29591382 0.6231698 prediction 0.71700696620175 Functional Gain - TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118728895 chr5:118728896 synonymous SNV . 0 22 hPsi_associated_SNPs_20646 0 0 0 2 0 Cytosol 0.438715375405058 0.438725854902451 0.2463396 0 hPsi_site_14370 iPseU_CNN:0.2463396;iRNA_PseU:0 14371 chr15 45555411 45555411 1 + G A BLCA 45555410 + 45555390 45555430 41 ACAAGATGTCTGAAGCCCTTTGAAAACTCCCGCCTGAGGCT ACAAGATGTCTGAAGCCCTTTAAAAACTCCCGCCTGAGGCT < 41bp 0.478981882420351 0.858500334224584 0.6623448 0.8116039 prediction 0.717000668449169 Functional Gain - SLC28A2 ENSG00000137860 CDS Human protein_coding chr15:45555410 chr15:45555411 nonsynonymous SNV 0.749 0 22 hPsi_associated_SNPs_20647 0 0 0 0 1 Nucleus 0.438666178894934 0.438718596095667 0.2985182 0 hPsi_site_14371 iPseU_CNN:0.2985182;iRNA_PseU:0 14372 chrX 103294700 103294700 1 + G A COAD 103294699 + 103294679 103294719 41 AGGCGCCACGCCAACCGCCGTGGGGACAGCTTCGGGGACAG AGGCGCCACGCCAACCGCCGTAGGGACAGCTTCGGGGACAG < 41bp 0.482709879131792 0.858497445921083 0.3324955 0.5535255 prediction 0.716994891842166 Functional Gain - H2BFM ENSG00000101812 CDS Human protein_coding chrX:103294699 chrX:103294700 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20648 0 0 0 0 0 unknown 0.438717832137175 0.439199220846329 0.107051 0 hPsi_site_14372 iPseU_CNN:0.107051;iRNA_PseU:0 14373 chr16 4924881 4924881 1 + G A COAD 4924880 + 4924860 4924900 41 TTCACGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCC TTCACGCCCCCATCTCCATTTACCAATAAGCTCCAAGGCCC < 41bp 0.462000392966181 0.858496676377533 0.41625088 0.7220825 prediction 0.716993352755065 Functional Gain - UBN1 ENSG00000118900 CDS Human protein_coding chr16:4924880 chr16:4924881 nonsynonymous SNV 0.849 1 22 hPsi_associated_SNPs_20649 0 0 1 0 0 Ribosome 0.438717736480369 0.438714948672131 0.444165 0 hPsi_site_14373 iPseU_CNN:0.444165;iRNA_PseU:0 14374 chr2 69053291 69053291 1 + G A GBM 69053290 + 69053270 69053310 41 GAAGAAGAAGTCAAGGAATTTGTCAAATCCATGAAGGAACC GAAGAAGAAGTCAAGGAATTTATCAAATCCATGAAGGAACC < 41bp 0.484138072368191 0.858492999910923 0.31904292 0.4509059 prediction 0.716985999821846 Functional Gain - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69053290 chr2:69053291 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_20650 0 0 0 0 0 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_14374 iPseU_CNN:0;iRNA_PseU:0 14375 chrX 70524989 70524989 1 + G A LUAD 70524988 + 70524968 70525008 41 GAAGAATCTGACGATTCAGATGATGATCTGAGCTGGACAGA GAAGAATCTGACGATTCAGATAATGATCTGAGCTGGACAGA < 41bp 0.516975765284994 0.875455889540682 0.16754699 0.22529608 prediction 0.716960248511376 Functional Gain - ITGB1BP2 ENSG00000147166 CDS Human protein_coding chrX:70524988 chrX:70524989 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20651 0 0 1 0 0 exosome 0.437393787882422 0.443756295742482 0 0 hPsi_site_14375 iPseU_CNN:0;iRNA_PseU:0 14376 chr11 117109359 117109359 1 + G A LUSC 117109358 + 117109338 117109378 41 GCAGAAGAACTCGCCTCTGTTGAGTGTAAGTAGCCAAACAA GCAGAAGAACTCGCCTCTGTTAAGTGTAAGTAGCCAAACAA < 41bp 0.480695016699654 0.858479388989683 0.30466074 0.3283558 prediction 0.716958777979366 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117109358 chr11:117109359 synonymous SNV . 0 22 hPsi_associated_SNPs_20652 0 0 1 0 1 chromatin 0.438718491835837 0.439682178231023 0 0 hPsi_site_14376 iPseU_CNN:0;iRNA_PseU:0 14377 chr3 49052619 49052619 1 + G A UCEC 49052618 + 49052598 49052638 41 GAATAGCACTGTGTTCCATGTGCCTGATGTGGCTGACATGG GAATAGCACTGTGTTCCATGTACCTGATGTGGCTGACATGG < 41bp 0.477248140023698 0.858475370665348 0.19460055 0.72522926 prediction 0.716950741330696 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49052618 chr3:49052619 synonymous SNV . 0 22 hPsi_associated_SNPs_20653 0 0 1 0 0 Nucleus 0.438748573822788 0.437359209592964 0.45045852 0 hPsi_site_14377 iPseU_CNN:0.45045852;iRNA_PseU:0 14378 chr1 152484129 152484129 1 + G A rs2105117 152484128 + 152484108 152484148 41 CCCCAAAATGCCCTCCCCAGTGTTCAGCCCCATGCCCACCT CCCCAAAATGCCCTCCCCAGTATTCAGCCCCATGCCCACCT < 41bp 0.490480032398973 0.858459069552603 0.34373355 0.62762344 prediction 0.716918139105207 Functional Gain - LCE5A ENSG00000186207 CDS Human protein_coding chr1:152484128 chr1:152484129 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_20654 0 0 0 0 0 exosome 0.438718593288486 0.438718594099484 0.25524688 0 hPsi_site_14378 iPseU_CNN:0.25524688;iRNA_PseU:0 14379 chr3 129221675 129221675 1 + G A STAD 129221674 + 129221654 129221694 41 GAGACCTACCTGAAGATGGGTGACCTCAAGTCCCTGGTGCA GAGACCTACCTGAAGATGGGTAACCTCAAGTCCCTGGTGCA < 41bp 0.506986162087515 0.865441942547971 0.22869527 0.6669852 prediction 0.716911560920914 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129221674 chr3:129221675 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_20655 0 0 1 0 1 Nucleus 0.438718580426378 0.438718592971285 0.3339704 0 hPsi_site_14379 iPseU_CNN:0.3339704;iRNA_PseU:0 14380 chr22 23438266 23438266 1 + G A HNSC 23438265 + 23438245 23438285 41 ACCCGAGCTGCTGGGTGTCATGCGACGGCTCTGGGCCGACC ACCCGAGCTGCTGGGTGTCATACGACGGCTCTGGGCCGACC < 41bp 0.518193157335554 0.876645848069513 0.18295044 0.2915724 prediction 0.716905381467918 Functional Gain - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438265 chr22:23438266 nonsynonymous SNV 0.930 1 22 hPsi_associated_SNPs_20656 0 0 0 0 0 Ribosome 0.438723038972358 0.440634832509508 0 0 hPsi_site_14380 iPseU_CNN:0;iRNA_PseU:0 14381 chr11 119206296 119206296 1 + G A LUSC 119206295 + 119206275 119206315 41 TCAACAGCCTGGTCAACATCTGCCTCATCGGCACTCAGAAC TCAACAGCCTGGTCAACATCTACCTCATCGGCACTCAGAAC < 41bp 0.514741160677349 0.873190652453534 0.2818014 0.53433913 prediction 0.716898983552371 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206295 chr11:119206296 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_20657 0 0 1 0 0 chromatin 0.438069358288984 0.438582332449878 0.06867826 0 hPsi_site_14381 iPseU_CNN:0.06867826;iRNA_PseU:0 14382 chrX 153556232 153556232 1 + G A KICH 153556231 + 153556211 153556251 41 TTTACCATTAAACCTCTGGATGTCGCCACCATCGTCTCCAG TTTACCATTAAACCTCTGGATATCGCCACCATCGTCTCCAG < 41bp 0.522188754460138 0.880626445476623 0.2600582 0.4902814 prediction 0.716875382032971 Functional Gain - TKTL1 ENSG00000007350 CDS Human protein_coding chrX:153556231 chrX:153556232 nonsynonymous SNV 0.188 1 22 hPsi_associated_SNPs_20658 0 0 1 0 2 exosome 0.438718594567256 0.438718687212169 0 0 hPsi_site_14382 iPseU_CNN:0;iRNA_PseU:0 14383 chr3 51990605 51990605 1 + G A rs323871 51990604 + 51990584 51990624 41 CGCCGTGCACTGCCTGGACCTGTGCGGGCCTGCACTCCGCA CGCCGTGCACTGCCTGGACCTATGCGGGCCTGCACTCCGCA < 41bp 0.501954614437459 0.860384702478761 0.5873577 0.7450077 prediction 0.716860176082605 Functional Gain - GPR62 ENSG00000180929 CDS Human protein_coding chr3:51990604 chr3:51990605 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_20659 0 0 0 0 0 exosome 0.441089646901327 0.439015733477538 0.3153 0 hPsi_site_14383 iPseU_CNN:0.3153;iRNA_PseU:0 14384 chr1 45974482 45974482 1 + G A UCEC 45974481 + 45974461 45974501 41 TCCCCAGCGCATATCAGGTGTGTGCATACACCCCCGATTTG TCCCCAGCGCATATCAGGTGTATGCATACACCCCCGATTTG < 41bp 0.51255063165755 0.870977042947857 0.25569445 0.37101805 prediction 0.716852822580616 Functional Gain - MMACHC ENSG00000132763 CDS Human protein_coding chr1:45974481 chr1:45974482 synonymous SNV . 0 22 hPsi_associated_SNPs_20660 0 0 0 2 1 Cytosol 0.43871939568135 0.438763309947289 0 0 hPsi_site_14384 iPseU_CNN:0;iRNA_PseU:0 14385 chr20 57429020 57429020 1 + G A LUAD 57429019 + 57428999 57429039 41 GAGCTTGATGGAGAAGGATTTGGGGACGACAGCCCACCCCC GAGCTTGATGGAGAAGGATTTAGGGACGACAGCCCACCCCC < 41bp 0.486261896558551 0.858420468690917 0.21090698 0.616729 prediction 0.716840937381835 Functional Gain - GNAS ENSG00000087460 CDS Human protein_coding chr20:57429019 chr20:57429020 nonsynonymous SNV 0.088 2 22 hPsi_associated_SNPs_20661 0 0 0 0 0 Cytosol 0.438718292019052 0.438718721744422 0.233458 0 hPsi_site_14385 iPseU_CNN:0.233458;iRNA_PseU:0 14386 chr17 63221545 63221545 1 + G A BLCA 63221544 + 63221524 63221564 41 TGCTGTGTCCCACGGGAGGGTGCAGCCCCTGGGGGACGTGG TGCTGTGTCCCACGGGAGGGTACAGCCCCTGGGGGACGTGG < 41bp 0.524072164553604 0.882471879741483 0.39930645 0.8234627 prediction 0.716799430375758 Functional Gain - RGS9 ENSG00000108370 CDS Human protein_coding chr17:63221544 chr17:63221545 synonymous SNV . 0 22 hPsi_associated_SNPs_20662 0 0 0 0 1 exosome 0.43871862314699 0.438702130169953 0.6469254 0 hPsi_site_14386 iPseU_CNN:0.6469254;iRNA_PseU:0 14387 chrX 48463330 48463330 1 + G A LAML 48463329 + 48463309 48463349 41 GCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACT GCAGGGCCACAGTGCACCTGTACTTGATGTCAGCTTCAACT < 41bp 0.519987020070988 0.878380035743697 0.34442392 0.7215135 prediction 0.716786031345419 Functional Gain - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48463329 chrX:48463330 synonymous SNV . 0 22 hPsi_associated_SNPs_20663 0 0 1 0 1 Ribosome 0.438724562951533 0.441114904176801 0.443027 0 hPsi_site_14387 iPseU_CNN:0.443027;iRNA_PseU:0 14388 chr2 11052945 11052945 1 + G A BLCA 11052944 + 11052924 11052964 41 CGACTGTTGCAAGAGCCACCTGAGCGAGAAGCGCGAGGAGC CGACTGTTGCAAGAGCCACCTAAGCGAGAAGCGCGAGGAGC < 41bp 0.493513608920067 0.85839299095222 0.29781312 0.4594197 prediction 0.71678598190444 Functional Gain - KCNF1 ENSG00000162975 CDS Human protein_coding chr2:11052944 chr2:11052945 synonymous SNV . 0 22 hPsi_associated_SNPs_20664 0 0 0 0 0 exosome 0.43871852965129 0.438718293636951 0 0 hPsi_site_14388 iPseU_CNN:0;iRNA_PseU:0 14389 chr5 139751895 139751895 1 + G A LUAD 139751894 + 139751874 139751914 41 ACCACAGGAACTCCTCTGGCTGGATGAGCTGATGCCAGAGG ACCACAGGAACTCCTCTGGCTAGATGAGCTGATGCCAGAGG < 41bp 0.464117176120343 0.858391186424887 0.26917738 0.36389476 prediction 0.716782372849775 Functional Gain - SLC4A9 ENSG00000113073 CDS Human protein_coding chr5:139751894 chr5:139751895 synonymous SNV . 0 22 hPsi_associated_SNPs_20665 0 0 0 0 2 unknown 0.438103024505397 0.438733010308626 0 0 hPsi_site_14389 iPseU_CNN:0;iRNA_PseU:0 14390 chr12 31135580 31135580 1 + G A STAD 31135579 + 31135559 31135599 41 CTGCTGCAAGACAGTGGTGGTGCGCTGCGGCCAGCGGGCCC CTGCTGCAAGACAGTGGTGGTACGCTGCGGCCAGCGGGCCC < 41bp 0.46259969358552 0.858379947171119 0.38654143 0.86559486 prediction 0.716759894342238 Functional Gain - TSPAN11 ENSG00000110900 CDS Human protein_coding chr12:31135579 chr12:31135580 synonymous SNV . 0 22 hPsi_associated_SNPs_20666 0 0 0 0 1 Cytosol 0.439359258690459 0.438716153175396 0.73118972 0 hPsi_site_14390 iPseU_CNN:0.73118972;iRNA_PseU:0 14391 chr2 220409504 220409504 1 + G A HNSC 220409503 + 220409483 220409523 41 CTGCTGCCCCCTGAGCCAGATGATGCCTTCTGGGGTGCACC CTGCTGCCCCCTGAGCCAGATAATGCCTTCTGGGGTGCACC < 41bp 0.47678892089647 0.858369419527574 0.2267406 0.27694327 prediction 0.716738839055147 Functional Gain - TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220409503 chr2:220409504 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_20667 0 0 0 0 2 chromatin 0.439045981090906 0.438663813038882 0 0 hPsi_site_14391 iPseU_CNN:0;iRNA_PseU:0 14392 chr6 116948888 116948888 1 + G A LUSC 116948887 + 116948867 116948907 41 GAGACATACCGCATATTTCTTGCCCTCAAGCAGCTTACTGA GAGACATACCGCATATTTCTTACCCTCAAGCAGCTTACTGA < 41bp 0.526474959268607 0.884842338156717 0.2237441 0.74358237 prediction 0.716734757776221 Functional Gain - RSPH4A ENSG00000111834 CDS Human protein_coding chr6:116948887 chr6:116948888 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20668 0 0 0 0 1 exosome 0.438719442357421 0.438717979554076 0.48716474 0 hPsi_site_14392 iPseU_CNN:0.48716474;iRNA_PseU:0 14393 chr14 23512254 23512254 1 + G A UCEC 23512253 + 23512233 23512273 41 CCTGCCACTGCCCACAGAGCTGCAGAAGATAGAGAGCTCTC CCTGCCACTGCCCACAGAGCTACAGAAGATAGAGAGCTCTC < 41bp 0.488563311507322 0.858359737718565 0.26623458 0.32372576 prediction 0.71671947543713 Functional Gain - PSMB11 ENSG00000222028 CDS Human protein_coding chr14:23512253 chr14:23512254 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_20669 0 0 0 0 0 exosome 0.438719041248267 0.438718586969087 0 0 hPsi_site_14393 iPseU_CNN:0;iRNA_PseU:0 14394 chr8 99961741 99961741 1 + G A STAD 99961740 + 99961720 99961760 41 CTTTACCAAATCCTACAATTTGCTCATCCATGAGAGGACCC CTTTACCAAATCCTACAATTTACTCATCCATGAGAGGACCC < 41bp 0.519595639529516 0.87794491887494 0.24427876 0.72114146 prediction 0.716698558690847 Functional Gain - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961740 chr8:99961741 synonymous SNV . 0 22 hPsi_associated_SNPs_20670 0 0 1 0 1 exosome 0.438718178311319 0.438718570462036 0.44228292 0 hPsi_site_14394 iPseU_CNN:0.44228292;iRNA_PseU:0 14395 chr5 40964912 40964912 1 + G A SKCM 40964911 + 40964891 40964931 41 AATGAAGGATACTCTCTTATTGGAAACCCAGTGGCCAGATG AATGAAGGATACTCTCTTATTAGAAACCCAGTGGCCAGATG < 41bp 0.519517231573757 0.8778637579035 0.5125166 0.7027848 prediction 0.716693052659487 Functional Gain - C7 ENSG00000112936 CDS Human protein_coding chr5:40964911 chr5:40964912 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20671 0 0 0 0 1 Endoplasmic reticulum 0.43893438694184 0.438717888096387 0.3805364 0 hPsi_site_14395 iPseU_CNN:0.3805364;iRNA_PseU:0 14396 chr14 93401249 93401249 1 + G A rs138998698 93401248 + 93401228 93401268 41 GAGACACCGGCTGGCAGGGCTGGCCCCAGGGCACCCTGTGG GAGACACCGGCTGGCAGGGCTAGCCCCAGGGCACCCTGTGG < 41bp 0.491115512068389 0.858346283502895 0.24690449 0.45594627 prediction 0.71669256700579 Functional Gain - CHGA ENSG00000100604 UTR3 Human protein_coding chr14:93401248 chr14:93401249 . . 0 22 hPsi_associated_SNPs_20672 0 0 0 0 0 exosome 0.438718592995141 0.438718592995102 0 0 hPsi_site_14396 iPseU_CNN:0;iRNA_PseU:0 14397 chr3 51864511 51864511 1 + G A SKCM 51864510 + 51864490 51864530 41 GGTCCTGGTGCGCAGGACCCTGCTGGTTGCTGCCCTCAGGG GGTCCTGGTGCGCAGGACCCTACTGGTTGCTGCCCTCAGGG < 41bp 0.474975884548765 0.85833046716425 0.26247567 0.42411637 prediction 0.7166609343285 Functional Gain - IQCF3 ENSG00000229972 CDS Human protein_coding chr3:51864510 chr3:51864511 synonymous SNV . 0 22 hPsi_associated_SNPs_20673 0 0 0 1 1 unknown 0.438813686970684 0.438618454720148 0 0 hPsi_site_14397 iPseU_CNN:0;iRNA_PseU:0 14398 chr14 20295961 20295961 1 + G A GBM 20295960 + 20295940 20295980 41 GGGATTACTCCTTGTTGTGATGGCCTTTGACCGCTACATCG GGGATTACTCCTTGTTGTGATAGCCTTTGACCGCTACATCG < 41bp 0.489198998643933 0.858328297245923 0.2222315 0.39944196 prediction 0.716656594491845 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20295960 chr14:20295961 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20674 0 0 0 0 0 unknown 0.438718523377923 0.444008832724533 0 0 hPsi_site_14398 iPseU_CNN:0;iRNA_PseU:0 14399 chr15 90168851 90168851 1 + G A rs145565248 90168850 + 90168830 90168870 41 TTCCTGGGGACAGTTTGGGTTGAGTTCCAGGAAGAGAGTCC TTCCTGGGGACAGTTTGGGTTAAGTTCCAGGAAGAGAGTCC < 41bp 0.481573638264195 0.858318351230267 0.37805933 0.6490321 prediction 0.716636702460535 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90168850 chr15:90168851 synonymous SNV . 0 22 hPsi_associated_SNPs_20675 0 0 1 0 0 chromatin 0.438718263780631 0.438714134795686 0.2980642 0 hPsi_site_14399 iPseU_CNN:0.2980642;iRNA_PseU:0 14400 chr3 184019789 184019789 1 + G A BLCA 184019788 + 184019768 184019808 41 TGCGACCTGCTTATGGAAATTGAGCAGGTGGACATGCTGGA TGCGACCTGCTTATGGAAATTAAGCAGGTGGACATGCTGGA < 41bp 0.469764096853193 0.858294749506071 0.3149917 0.40153188 prediction 0.716589499012141 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184019788 chr3:184019789 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20676 0 0 1 0 1 Ribosome 0.438915536629143 0.439310874929828 0 0 hPsi_site_14400 iPseU_CNN:0;iRNA_PseU:0 14401 chr11 59245658 59245658 1 + G A LUSC 59245657 + 59245637 59245677 41 TGTGGTGACCCTGCATTTCGTGCCCTGCATCTATGTCTATG TGTGGTGACCCTGCATTTCGTACCCTGCATCTATGTCTATG < 41bp 0.502932993932682 0.861205389315449 0.19805962 0.6279893 prediction 0.716544790765534 Functional Gain - OR4D10 ENSG00000254466 CDS Human protein_coding chr11:59245657 chr11:59245658 synonymous SNV . 0 22 hPsi_associated_SNPs_20677 0 0 0 0 0 unknown 0.438573611968135 0.429746433095597 0.2559786 0 hPsi_site_14401 iPseU_CNN:0.2559786;iRNA_PseU:0 14402 chr21 45217560 45217560 1 + G A THCA 45217559 + 45217539 45217579 41 ATCGACCCCTTCTGCAGAATTGCTGCCCGGACCAAGGAGTA ATCGACCCCTTCTGCAGAATTACTGCCCGGACCAAGGAGTA < 41bp 0.467465901433689 0.858270160102764 0.1570603 0.36930424 prediction 0.716540320205528 Functional Gain - RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217559 chr21:45217560 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_20678 0 0 1 0 2 Ribosome 0.43871776618287 0.43829513937606 0 0 hPsi_site_14402 iPseU_CNN:0;iRNA_PseU:0 14403 chr12 57965900 57965900 1 + G A rs139091551 57965899 + 57965879 57965919 41 CCAGCGGGAGCTGAGCCACCTGCAATCAGAGAACGATGCCG CCAGCGGGAGCTGAGCCACCTACAATCAGAGAACGATGCCG < 41bp 0.457942291041121 0.858268192031519 0.31729954 0.5674822 prediction 0.716536384063038 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57965899 chr12:57965900 synonymous SNV . 0 22 hPsi_associated_SNPs_20679 1 0 1 0 1 Cytosol 0.43870291127845 0.438713662153024 0.1349644 0 hPsi_site_14403 iPseU_CNN:0.1349644;iRNA_PseU:0 14404 chr2 27278589 27278589 1 + G A CESC 27278588 + 27278568 27278608 41 GAATCTGAACCGTCAGTACCTGAAGCCTGATGCCGTCCTGC GAATCTGAACCGTCAGTACCTAAAGCCTGATGCCGTCCTGC < 41bp 0.468139597942061 0.85826038982582 0.29224938 0.49140272 prediction 0.71652077965164 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278588 chr2:27278589 synonymous SNV . 0 22 hPsi_associated_SNPs_20680 0 0 1 0 1 Cytosol 0.43871762393178 0.438718592945245 0 0 hPsi_site_14404 iPseU_CNN:0;iRNA_PseU:0 14405 chr11 4903382 4903382 1 + G A rs377372478 4903381 + 4903361 4903401 41 ACGACCCTTCCCACTGTGCTTGGTGTTCTCTGGTTTCATGC ACGACCCTTCCCACTGTGCTTAGTGTTCTCTGGTTTCATGC < 41bp 0.494695869425715 0.85825165353317 0.33526203 0.60255396 prediction 0.71650330706634 Functional Gain - OR51T1 ENSG00000176900 CDS Human protein_coding chr11:4903381 chr11:4903382 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_20681 0 0 0 0 0 unknown 0.438713123795858 0.438718542340133 0.20510792 0 hPsi_site_14405 iPseU_CNN:0.20510792;iRNA_PseU:0 14406 chr18 29617179 29617179 1 + G A LUAD 29617178 + 29617158 29617198 41 GAAGGAGTTCCAGCAACTGATGTAGCCAAAAGAATGAAATC GAAGGAGTTCCAGCAACTGATATAGCCAAAAGAATGAAATC < 41bp 0.521904718545738 0.880153818885406 0.3638049 0.4285403 prediction 0.716498200679334 Functional Gain - RNF125 ENSG00000101695 CDS Human protein_coding chr18:29617178 chr18:29617179 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_20682 0 0 0 0 1 Nucleus 0.439103979213678 0.438719337690544 0 0 hPsi_site_14406 iPseU_CNN:0;iRNA_PseU:0 14407 chr11 4608668 4608668 1 + G A BRCA 4608667 + 4608647 4608687 41 ATGTGGTTGTCCACTCCTACTGTGAGCACATAGCTTTGGCC ATGTGGTTGTCCACTCCTACTATGAGCACATAGCTTTGGCC < 41bp 0.505677821102332 0.863912353283467 0.20224962 0.42579752 prediction 0.716469064362269 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608667 chr11:4608668 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_20683 0 0 0 0 0 unknown 0.438719845900219 0.438718781786846 0 0 hPsi_site_14407 iPseU_CNN:0;iRNA_PseU:0 14408 chr12 6426809 6426809 1 + G A ACC 6426808 + 6426788 6426828 41 AAGTACCCACTGCTGCTCCATGCTGTGCTCAAGAGGAGCCC AAGTACCCACTGCTGCTCCATACTGTGCTCAAGAGGAGCCC < 41bp 0.456315481581039 0.858232989642074 0.2624808 0.4561088 prediction 0.716465979284148 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6426808 chr12:6426809 nonsynonymous SNV 0.720 4 22 hPsi_associated_SNPs_20684 0 0 0 0 2 Nucleus 0.438720679922152 0.438732832582604 0 0 hPsi_site_14408 iPseU_CNN:0;iRNA_PseU:0 14409 chr19 3532614 3532614 1 + G A UCEC 3532613 + 3532593 3532633 41 TCGACACGGGCTCCCAAGTGTGCAATCTGGCCTGGTCCAAG TCGACACGGGCTCCCAAGTGTACAATCTGGCCTGGTCCAAG < 41bp 0.467080683574127 0.858222251882408 0.299355 0.42958465 prediction 0.716444503764816 Functional Gain - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3532613 chr19:3532614 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20685 0 0 1 0 1 Ribosome 0.438720921736929 0.438718417539727 0 0 hPsi_site_14409 iPseU_CNN:0;iRNA_PseU:0 14410 chr17 74729619 74729619 1 + G A BLCA 74729618 + 74729598 74729638 41 TTAAGTGCTGACTGGTCACTTGAAGCTTTACTCTACAAATG TTAAGTGCTGACTGGTCACTTAAAGCTTTACTCTACAAATG < 41bp 0.509524537417936 0.867741101656441 0.22629753 0.28700194 prediction 0.716433128477009 Functional Gain - METTL23 ENSG00000181038 CDS Human protein_coding chr17:74729618 chr17:74729619 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20686 0 0 1 7 1 Ribosome 0.454393391935496 0.441807121005559 0 0 hPsi_site_14410 iPseU_CNN:0;iRNA_PseU:0 14411 chr12 121098927 121098927 1 + G A LUAD 121098926 + 121098906 121098946 41 CAGTGAGCTGCGAGAGGCTATGAGGAAGCTCCTGGGTCATC CAGTGAGCTGCGAGAGGCTATAAGGAAGCTCCTGGGTCATC < 41bp 0.472697554047697 0.85821378931914 0.30320555 0.34730074 prediction 0.716427578638279 Functional Gain - CABP1 ENSG00000157782 CDS Human protein_coding chr12:121098926 chr12:121098927 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20687 0 0 1 0 2 Nucleus 0.438718590538556 0.438718592050073 0 0 hPsi_site_14411 iPseU_CNN:0;iRNA_PseU:0 14412 chr11 85365200 85365200 1 + G A UCEC 85365199 + 85365179 85365219 41 TTTTCGACGCATCTTGAATGTGACAAAGGCTCGCATAGCTG TTTTCGACGCATCTTGAATGTAACAAAGGCTCGCATAGCTG < 41bp 0.523160579911829 0.881369206070816 0.2599845 0.6894611 prediction 0.716417252317975 Functional Gain - TMEM126A ENSG00000171202 CDS Human protein_coding chr11:85365199 chr11:85365200 synonymous SNV . 0 22 hPsi_associated_SNPs_20688 0 0 1 0 1 Ribosome 0.439454200304121 0.438863336575917 0.3789222 0 hPsi_site_14412 iPseU_CNN:0.3789222;iRNA_PseU:0 14413 chr19 49671593 49671593 1 + G A SKCM 49671592 + 49671572 49671612 41 GGCTGTACGGGACCATCAGATGGCCAGCACTGGGGGCACCA GGCTGTACGGGACCATCAGATAGCCAGCACTGGGGGCACCA < 41bp 0.47472559522757 0.85820125294834 0.29102796 0.61536974 prediction 0.716402505896679 Functional Gain - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671592 chr19:49671593 stopgain 0.549 1 22 hPsi_associated_SNPs_20689 0 0 1 0 2 chromatin 0.43871861375856 0.438718587067024 0.23073948 0 hPsi_site_14413 iPseU_CNN:0.23073948;iRNA_PseU:0 14414 chr2 152226702 152226702 1 + G A ESCA 152226701 + 152226681 152226721 41 ACCTTGAAGATGACCCAGGTTGCTTGGCTGATTATGTTGAA ACCTTGAAGATGACCCAGGTTACTTGGCTGATTATGTTGAA < 41bp 0.490168876603785 0.858197610363772 0.25916976 0.39775372 prediction 0.716395220727543 Functional Gain - TNFAIP6 ENSG00000123610 CDS Human protein_coding chr2:152226701 chr2:152226702 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_20690 0 0 0 0 1 exosome 0.438718873877046 0.438729234745856 0 0 hPsi_site_14414 iPseU_CNN:0;iRNA_PseU:0 14415 chr1 110168308 110168308 1 + G A LUSC 110168307 + 110168287 110168327 41 CTGTTCACCCGCTCACTGGCTGAGAGCGAGCTCCGTAGTGC CTGTTCACCCGCTCACTGGCTAAGAGCGAGCTCCGTAGTGC < 41bp 0.476139577676677 0.858197180573712 0.3103925 0.9209906 prediction 0.716394361147424 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168307 chr1:110168308 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_20691 0 0 1 0 1 Cytosol 0.430405053924241 0.43878842023465 0.8419812 0 hPsi_site_14415 iPseU_CNN:0.8419812;iRNA_PseU:0 14416 chr2 97024827 97024827 1 + G A STAD 97024826 + 97024806 97024846 41 ATGGAGACATCAGGACCATGTGCCCCCTTCTGTCTATGAAA ATGGAGACATCAGGACCATGTACCCCCTTCTGTCTATGAAA < 41bp 0.527984503598167 0.886161176998028 0.23946872 0.34497333 prediction 0.716353346799721 Functional Gain - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97024826 chr2:97024827 nonsynonymous SNV 0.939 4 22 hPsi_associated_SNPs_20692 0 0 1 0 1 Cytosol 0.438718594068764 0.438718605333771 0 0 hPsi_site_14416 iPseU_CNN:0;iRNA_PseU:0 14417 chr3 161214715 161214715 1 + G A COAD 161214714 + 161214694 161214734 41 GAAATCTGAGGAAAGAGAGATGCCAAAGGGTCTAAAGCCAT GAAATCTGAGGAAAGAGAGATACCAAAGGGTCTAAAGCCAT < 41bp 0.488186631639775 0.858174955336514 0.38019735 0.6502059 prediction 0.716349910673029 Functional Gain - OTOL1 ENSG00000182447 CDS Human protein_coding chr3:161214714 chr3:161214715 nonsynonymous SNV 0.066 1 22 hPsi_associated_SNPs_20693 0 0 0 0 0 exosome 0.438725392945338 0.438718022495404 0.3004118 0 hPsi_site_14417 iPseU_CNN:0.3004118;iRNA_PseU:0 14418 chr1 151020365 151020365 1 + G A LUAD 151020364 + 151020344 151020384 41 GCTGCTGTGGGTCCTGCTGCTGAATCTGGGTCCCCGGGCGG GCTGCTGTGGGTCCTGCTGCTAAATCTGGGTCCCCGGGCGG < 41bp 0.487763611428402 0.858151088200395 0.276982 0.63725615 prediction 0.716302176400789 Functional Gain - C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020364 chr1:151020365 synonymous SNV . 0 22 hPsi_associated_SNPs_20694 0 0 1 0 0 Cytosol 0.43872136262899 0.438718447512924 0.2745123 0 hPsi_site_14418 iPseU_CNN:0.2745123;iRNA_PseU:0 14419 chr11 8123105 8123105 1 + G A STAD 8123104 + 8123084 8123124 41 TGGATTACAACTACCCGCTGTGTGCACTGCAGGCCTTTGCC TGGATTACAACTACCCGCTGTATGCACTGCAGGCCTTTGCC < 41bp 0.518734905767752 0.876883074908477 0.28718853 0.4511791 prediction 0.716296338281449 Functional Gain - TUB ENSG00000166402 CDS Human protein_coding chr11:8123104 chr11:8123105 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20695 0 0 1 0 1 nucleus 0.438718584749643 0.438718626824571 0 0 hPsi_site_14419 iPseU_CNN:0;iRNA_PseU:0 14420 chr15 32925306 32925306 1 + G A COAD 32925305 + 32925285 32925325 41 GAATTGCAGGCAAAAAAGTTTGCAGGTACTTTATCCAGGAC GAATTGCAGGCAAAAAAGTTTACAGGTACTTTATCCAGGAC < 41bp 0.485304138988308 0.85813687529081 0.2650329 0.42531627 prediction 0.71627375058162 Functional Gain - ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32925305 chr15:32925306 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_20696 0 0 1 0 1 Ribosome 0.438718794972937 0.43871270964837 0 0 hPsi_site_14420 iPseU_CNN:0;iRNA_PseU:0 14421 chr3 133118967 133118967 1 + G A PAAD 133118966 + 133118946 133118986 41 GTAGTGGACTTGCCCACCAGTGCCAGCTCCAGCATGCCCCT GTAGTGGACTTGCCCACCAGTACCAGCTCCAGCATGCCCCT < 41bp 0.513013549590588 0.871149132186625 0.21365985 0.3297416 prediction 0.716271165192074 Functional Gain - BFSP2 ENSG00000170819 CDS Human protein_coding chr3:133118966 chr3:133118967 nonsynonymous SNV 0.016 1 22 hPsi_associated_SNPs_20697 0 0 0 0 0 exosome 0.438717490189458 0.438716865361728 0 0 hPsi_site_14421 iPseU_CNN:0;iRNA_PseU:0 14422 chr6 20490541 20490541 1 + G A UCEC 20490540 + 20490520 20490560 41 AGGACCGTTTGTGAACTTACTGCCTCCCCTGCTGCAAGAGG AGGACCGTTTGTGAACTTACTACCTCCCCTGCTGCAAGAGG < 41bp 0.508708419837462 0.866833618750915 0.2480286 0.4618234 prediction 0.716250397826906 Functional Gain - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20490540 chr6:20490541 synonymous SNV . 0 22 hPsi_associated_SNPs_20698 0 0 1 0 0 Cytosol 0.438718491985628 0.438718634297205 0 0 hPsi_site_14422 iPseU_CNN:0;iRNA_PseU:0 14423 chr9 104171829 104171829 1 + G A BLCA 104171828 + 104171808 104171848 41 TCAGAAGATCCATGCAGAGGTGAAAACCCAAGAAACCCATG TCAGAAGATCCATGCAGAGGTAAAAACCCAAGAAACCCATG < 41bp 0.486700238703398 0.858124692909939 0.33369014 0.51564944 prediction 0.716249385819878 Functional Gain - ZNF189 ENSG00000136870 CDS Human protein_coding chr9:104171828 chr9:104171829 synonymous SNV . 0 22 hPsi_associated_SNPs_20699 0 0 1 0 0 chromatin 0.438721930032146 0.4387185929951 0.03129888 0 hPsi_site_14423 iPseU_CNN:0.03129888;iRNA_PseU:0 14424 chr8 145066099 145066099 1 + G A UCEC 145066098 + 145066078 145066118 41 GACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGG GACCCTGTCCACGGTGTCTGTATTCACTTTTGTTGCGGAGG < 41bp 0.461555286097855 0.8581223758722 0.3454689 0.51095176 prediction 0.716244751744399 Functional Gain - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066098 chr8:145066099 synonymous SNV . 0 22 hPsi_associated_SNPs_20700 0 0 1 0 1 Endoplasmic reticulum 0.438837313719465 0.438913453794876 0.02190352 0 hPsi_site_14424 iPseU_CNN:0.02190352;iRNA_PseU:0 14425 chr10 115485230 115485230 1 + G A rs193124738 115485229 + 115485209 115485249 41 TGTCACACCAATAAAGGATTTGACAGCCCACTTTAGGGGGG TGTCACACCAATAAAGGATTTAACAGCCCACTTTAGGGGGG < 41bp 0.524373970906012 0.88249088197278 0.3271582 0.58423567 prediction 0.716233822133536 Functional Gain - CASP7 ENSG00000165806 CDS Human protein_coding chr10:115485229 chr10:115485230 synonymous SNV . 0 22 hPsi_associated_SNPs_20701 0 0 1 0 1 Ribosome 0.438746334085957 0.438718540060976 0.16847134 0 hPsi_site_14425 iPseU_CNN:0.16847134;iRNA_PseU:0 14426 chr7 143657601 143657601 1 + G A SKCM 143657600 + 143657580 143657620 41 TTTATTGATCACATATCCTGTGAACTCCTAGCTGTGGTCAG TTTATTGATCACATATCCTGTAAACTCCTAGCTGTGGTCAG < 41bp 0.512033526277733 0.870143699404955 0.40363157 0.7500738 prediction 0.716220346254445 Functional Gain - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657600 chr7:143657601 nonsynonymous SNV 0.579 4 22 hPsi_associated_SNPs_20702 0 0 0 0 0 unknown 0.438708838331221 0.438718592904316 0.5001476 0 hPsi_site_14426 iPseU_CNN:0.5001476;iRNA_PseU:0 14427 chr11 5068133 5068133 1 + G A SKCM 5068132 + 5068112 5068152 41 TATGGCTTTTGACCGTTATGTGGCCGTCTGTGCTCCACTAC TATGGCTTTTGACCGTTATGTAGCCGTCTGTGCTCCACTAC < 41bp 0.492557856879359 0.858104208188967 0.2527782 0.7972947 prediction 0.716208416377933 Functional Gain - OR52J3 ENSG00000205495 CDS Human protein_coding chr11:5068132 chr11:5068133 synonymous SNV . 0 22 hPsi_associated_SNPs_20703 0 0 0 0 0 unknown 0.438701277318089 0.43872026926841 0.5945894 0 hPsi_site_14427 iPseU_CNN:0.5945894;iRNA_PseU:0 14428 chr17 27028550 27028550 1 + G A rs75352557 27028549 + 27028529 27028569 41 GCGGAAACAGAAGCAGCGGCTGACACCTCGGCCCTCCCCCA GCGGAAACAGAAGCAGCGGCTAACACCTCGGCCCTCCCCCA < 41bp 0.487579879129312 0.858103148390046 0.29295695 0.5752996 prediction 0.716206296780091 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27028549 chr17:27028550 synonymous SNV . 0 22 hPsi_associated_SNPs_20704 0 0 1 0 1 Cytosol 0.438718593016544 0.438718592988464 0.1505992 0 hPsi_site_14428 iPseU_CNN:0.1505992;iRNA_PseU:0 14429 chr10 6264883 6264883 1 + G A rs2230272 6264882 + 6264862 6264902 41 GCTGGAGCGGCAGGAGAATGTGCTGGTCATCTGCCACCAGG GCTGGAGCGGCAGGAGAATGTACTGGTCATCTGCCACCAGG < 41bp 0.472453916825354 0.858093309043625 0.26496455 0.8803398 prediction 0.716186618087249 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6264882 chr10:6264883 synonymous SNV . 0 22 hPsi_associated_SNPs_20705 0 0 1 0 2 Ribosome 0.438718859565316 0.438714480620364 0.7606796 0 hPsi_site_14429 iPseU_CNN:0.7606796;iRNA_PseU:0 14430 chr8 25341585 25341585 1 + G A KICH 25341584 + 25341564 25341604 41 GGAAGTGTTTGATGAATCTTTGCCAGCAAATACTCCATTGC GGAAGTGTTTGATGAATCTTTACCAGCAAATACTCCATTGC < 41bp 0.509806142908422 0.867897764422583 0.26815766 0.3738919 prediction 0.716183243028322 Functional Gain - CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25341584 chr8:25341585 synonymous SNV . 0 22 hPsi_associated_SNPs_20706 0 0 1 0 0 Nucleus 0.437041143790299 0.442938911868449 0 0 hPsi_site_14430 iPseU_CNN:0;iRNA_PseU:0 14431 chr15 64689913 64689913 1 + G A BLCA 64689912 + 64689892 64689932 41 CTCCCTGGTCGTCACCCTTGTGATTGCCTGGGCCAGAAGCA CTCCCTGGTCGTCACCCTTGTAATTGCCTGGGCCAGAAGCA < 41bp 0.461332293519025 0.858085227369137 0.3454942 0.8528452 prediction 0.716170454738274 Functional Gain - TRIP4 ENSG00000103671 CDS Human protein_coding chr15:64689912 chr15:64689913 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_20707 0 0 0 0 0 Ribosome 0.438718638720394 0.438718644880421 0.7056904 0 hPsi_site_14431 iPseU_CNN:0.7056904;iRNA_PseU:0 14432 chr2 187373386 187373386 1 + G A LAML 187373385 + 187373365 187373405 41 GCCATTGATGCTGTTCCTGTTGATGAAAATCTTTTCACTGG GCCATTGATGCTGTTCCTGTTAATGAAAATCTTTTCACTGG < 41bp 0.507462792222823 0.865531981228791 0.37017286 0.4920255 prediction 0.716138378011936 Functional Gain - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187373385 chr2:187373386 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20708 0 0 1 0 0 Ribosome 0.439121253369879 0.438713688012261 0 0 hPsi_site_14432 iPseU_CNN:0;iRNA_PseU:0 14433 chr9 126777551 126777551 1 + G A SKCM 126777550 + 126777530 126777570 41 CACGGGCGACCACTTCGGCATGAAGGACAGCCTGGTCTACT CACGGGCGACCACTTCGGCATAAAGGACAGCCTGGTCTACT < 41bp 0.459976811994588 0.858065917140968 0.2434304 0.423668 prediction 0.716131834281936 Functional Gain - LHX2 ENSG00000106689 CDS Human protein_coding chr9:126777550 chr9:126777551 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20709 0 0 0 0 0 Cytosol 0.438718680556482 0.438718583806973 0 0 hPsi_site_14433 iPseU_CNN:0;iRNA_PseU:0 14434 chrX 35820676 35820676 1 + G A SKCM 35820675 + 35820655 35820695 41 CCAGAAAGTGGCTTTTTTGGTGAATTTCATGCTGCACAAGT CCAGAAAGTGGCTTTTTTGGTAAATTTCATGCTGCACAAGT < 41bp 0.484452624614155 0.858065612370508 0.24831808 0.3977191 prediction 0.716131224741015 Functional Gain - MAGEB16 ENSG00000189023 CDS Human protein_coding chrX:35820675 chrX:35820676 synonymous SNV . 0 22 hPsi_associated_SNPs_20710 0 0 0 0 0 exosome 0.438716754374658 0.438709034673367 0 0 hPsi_site_14434 iPseU_CNN:0;iRNA_PseU:0 14435 chr1 177249839 177249839 1 + G A HNSC 177249838 + 177249818 177249858 41 TCTTGGGCTGGAGACAGACTTGCAGGACCTGGAGCTAAAGT TCTTGGGCTGGAGACAGACTTACAGGACCTGGAGCTAAAGT < 41bp 0.514547970145071 0.872607564845724 0.6661155 0.7822839 prediction 0.716119189401307 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177249838 chr1:177249839 synonymous SNV . 0 22 hPsi_associated_SNPs_20711 0 0 0 0 0 Nucleus 0.43870928812111 0.438716975755908 0.2323368 0 hPsi_site_14435 iPseU_CNN:0.2323368;iRNA_PseU:0 14436 chr19 50157980 50157980 1 + G A rs61741228 50157979 + 50157959 50157999 41 TGTGCCCACCTCTTTGGGTCTGCCCCCTGGCCCCTCCAGCT TGTGCCCACCTCTTTGGGTCTACCCCCTGGCCCCTCCAGCT < 41bp 0.470541594888101 0.858058473773342 0.18322396 0.77269983 prediction 0.716116947546685 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50157979 chr19:50157980 synonymous SNV . 0 22 hPsi_associated_SNPs_20712 0 0 1 0 1 Cytosol 0.438714585528612 0.438727556253433 0.54539966 0 hPsi_site_14436 iPseU_CNN:0.54539966;iRNA_PseU:0 14437 chr19 52207581 52207581 1 + G A rs113885698 52207580 + 52207560 52207600 41 GGCCTCGTTCCGGGAAGTGCTGCGCTGGGCGCCGCGGGATG GGCCTCGTTCCGGGAAGTGCTACGCTGGGCGCCGCGGGATG < 41bp 0.496394310403001 0.858050075935694 0.31888828 0.6486683 prediction 0.716100151871387 Functional Gain - SPACA6 ENSG00000182310 ncRNA_exonic Human protein_coding chr19:52207580 chr19:52207581 . . 0 22 hPsi_associated_SNPs_20713 0 0 1 0 1 chromatin 0.438716786439239 0.43871510168446 0.2973366 0 hPsi_site_14437 iPseU_CNN:0.2973366;iRNA_PseU:0 14438 chr8 145724303 145724303 1 + G A KIRC 145724302 + 145724282 145724322 41 CGTGGCACGGTTTGCAGTGCTGCATTGATGATTTCCGAGAG CGTGGCACGGTTTGCAGTGCTACATTGATGATTTCCGAGAG < 41bp 0.513608673412717 0.871656073940891 0.33441913 0.8154686 prediction 0.716094801056349 Functional Gain - PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145724302 chr8:145724303 nonsynonymous SNV 0.160 4 22 hPsi_associated_SNPs_20714 0 0 0 0 1 Ribosome 0.45232737230275 0.443216106081997 0.6309372 0 hPsi_site_14438 iPseU_CNN:0.6309372;iRNA_PseU:0 14439 chr3 139065764 139065764 1 + G A BLCA 139065763 + 139065743 139065783 41 AAGAAACCTACATTTATGGATGAGGAAGTTCAAAGCATACT AAGAAACCTACATTTATGGATAAGGAAGTTCAAAGCATACT < 41bp 0.510919919759139 0.868946392247892 0.3806914 0.54095054 prediction 0.716052944977506 Functional Gain - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065763 chr3:139065764 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_20715 0 0 1 0 2 Ribosome 0.438718593019603 0.438718592995235 0.08190108 0 hPsi_site_14439 iPseU_CNN:0.08190108;iRNA_PseU:0 14440 chr16 3166477 3166477 1 + G A STAD 3166476 + 3166456 3166496 41 TGTACCTCTCCCGGGAGGAGTGGGGACGGCTGGACCACACG TGTACCTCTCCCGGGAGGAGTAGGGACGGCTGGACCACACG < 41bp 0.525865698873187 0.883886346857875 0.17711878 0.17622015 prediction 0.716041295969378 Functional Gain - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3166476 chr16:3166477 stopgain 0.996 0 22 hPsi_associated_SNPs_20716 0 0 0 0 2 chromatin 0.438716438141898 0.438747825277392 0 0 hPsi_site_14440 iPseU_CNN:0;iRNA_PseU:0 14441 chr5 157159976 157159976 1 + G A LUSC 157159975 + 157159955 157159995 41 ATGGAAGAACTAGAGGATATTGTGATCGCGTATGGACAGAG ATGGAAGAACTAGAGGATATTATGATCGCGTATGGACAGAG < 41bp 0.508959524638434 0.866979399461675 0.28741717 0.6182686 prediction 0.716039749646483 Functional Gain - THG1L ENSG00000113272 CDS Human protein_coding chr5:157159975 chr5:157159976 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20717 0 0 1 0 1 Nucleus 0.438959816773024 0.438942259382099 0.2365372 0 hPsi_site_14441 iPseU_CNN:0.2365372;iRNA_PseU:0 14442 chr4 123814181 123814181 1 + G A LUAD 123814180 + 123814160 123814200 41 TTCAGTCTTCGCCAGGTCATTGAGATCCATCCACTCACATC TTCAGTCTTCGCCAGGTCATTAAGATCCATCCACTCACATC < 41bp 0.495691974019479 0.858018635102322 0.23639476 0.393887 prediction 0.716037270204644 Functional Gain - NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814180 chr4:123814181 synonymous SNV . 0 22 hPsi_associated_SNPs_20718 0 0 0 0 0 Ribosome 0.437903935450483 0.438731607392678 0 0 hPsi_site_14442 iPseU_CNN:0;iRNA_PseU:0 14443 chr3 88040235 88040235 1 + G A UCEC 88040234 + 88040214 88040254 41 CTGCTGCACGTGCTCCATCTTGCATCTCTCAGCTATAGCTT CTGCTGCACGTGCTCCATCTTACATCTCTCAGCTATAGCTT < 41bp 0.493154309457176 0.858016766282282 0.29393852 0.4840686 prediction 0.716033532564564 Functional Gain - HTR1F ENSG00000179097 CDS Human protein_coding chr3:88040234 chr3:88040235 synonymous SNV . 0 22 hPsi_associated_SNPs_20719 0 0 0 0 0 exosome 0.438721012047059 0.438713956215741 0 0 hPsi_site_14443 iPseU_CNN:0;iRNA_PseU:0 14444 chr14 105963729 105963729 1 + G A CESC 105963728 + 105963708 105963748 41 GGAGCGTGAGAACCAGCGCCTGGAGGCTGTCCTGGCGTGGC GGAGCGTGAGAACCAGCGCCTAGAGGCTGTCCTGGCGTGGC < 41bp 0.458580258907157 0.858012304893774 0.3120278 0.33558503 prediction 0.716024609787548 Functional Gain - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105963728 chr14:105963729 synonymous SNV . 0 22 hPsi_associated_SNPs_20720 0 0 1 0 2 Ribosome 0.438718588126802 0.438718655979262 0 0 hPsi_site_14444 iPseU_CNN:0;iRNA_PseU:0 14445 chr11 71259864 71259864 1 + G A OV 71259863 + 71259843 71259883 41 GCTGTGTTCCAGCCTGTTCCTGCTCTAGCTGTGGCAAGCGG GCTGTGTTCCAGCCTGTTCCTACTCTAGCTGTGGCAAGCGG < 41bp 0.492074358976013 0.858007669643534 0.19900563 0.27391452 prediction 0.716015339287068 Functional Gain - KRTAP5-9 ENSG00000254997 CDS Human protein_coding chr11:71259863 chr11:71259864 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_20721 0 0 0 0 0 exosome 0.438718580344462 0.438717507234907 0 0 hPsi_site_14445 iPseU_CNN:0;iRNA_PseU:0 14446 chr16 2115600 2115600 1 + G A BLCA 2115599 + 2115579 2115619 41 CTCGGCCTCCTTGGAGGATGTGAAGACAGCCGTCCTGGGGC CTCGGCCTCCTTGGAGGATGTAAAGACAGCCGTCCTGGGGC < 41bp 0.473432002572975 0.858003806450383 0.34765887 0.6771669 prediction 0.716007612900766 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2115599 chr16:2115600 synonymous SNV . 0 22 hPsi_associated_SNPs_20722 0 0 1 0 2 Endoplasmic reticulum 0.43871859295064 0.438718592993557 0.3543338 0 hPsi_site_14446 iPseU_CNN:0.3543338;iRNA_PseU:0 14447 chr5 3600335 3600335 1 + G A STAD 3600334 + 3600314 3600354 41 ATTGCCCCGGGGGCACTCAATGGAGACAAGGCCTCGGTCCG ATTGCCCCGGGGGCACTCAATAGAGACAAGGCCTCGGTCCG < 41bp 0.492026064813733 0.857990724364871 0.33187568 0.40006268 prediction 0.715981448729742 Functional Gain - IRX1 ENSG00000170549 CDS Human protein_coding chr5:3600334 chr5:3600335 nonsynonymous SNV 0.041 0 22 hPsi_associated_SNPs_20723 0 0 0 0 1 exosome 0.438718591291244 0.438718592991465 0 0 hPsi_site_14447 iPseU_CNN:0;iRNA_PseU:0 14448 chrX 119007336 119007336 1 + G A HNSC 119007335 + 119007315 119007355 41 GATAGGCGCATCTCTGGAGTTGATCGTTACTATGTGTCAAA GATAGGCGCATCTCTGGAGTTAATCGTTACTATGTGTCAAA < 41bp 0.512674014609477 0.87065318966288 0.13251096 0.2850288 prediction 0.715958350106806 Functional Gain - NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119007335 chrX:119007336 nonsynonymous SNV 0.773 0 22 hPsi_associated_SNPs_20724 0 0 1 0 2 Ribosome 0.440580940629481 0.438743126371814 0 0 hPsi_site_14448 iPseU_CNN:0;iRNA_PseU:0 14449 chr7 75933361 75933361 1 + G A CESC 75933360 + 75933340 75933380 41 CCTGTCCCCTGAGGGCACACTGACCGTGGAGGCCCCCATGC CCTGTCCCCTGAGGGCACACTAACCGTGGAGGCCCCCATGC < 41bp 0.484860214054271 0.857977229803548 0.16771504 0.4660555 prediction 0.715954459607097 Functional Gain - HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933360 chr7:75933361 synonymous SNV . 0 22 hPsi_associated_SNPs_20725 0 0 1 0 1 Cytosol 0.438717799654716 0.438718619523583 0 0 hPsi_site_14449 iPseU_CNN:0;iRNA_PseU:0 14450 chr14 20248889 20248889 1 + G A SKCM 20248888 + 20248868 20248908 41 CCTCCACTATGCTACCATCATGAATCGACGTCTCTGCTGTA CCTCCACTATGCTACCATCATAAATCGACGTCTCTGCTGTA < 41bp 0.50104583847234 0.859015733809697 0.20651987 0.30006045 prediction 0.715939790674714 Functional Gain - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20248888 chr14:20248889 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_20726 0 0 0 0 0 unknown 0.438225143930267 0.438715134685782 0 0 hPsi_site_14450 iPseU_CNN:0;iRNA_PseU:0 14451 chr7 116199222 116199222 1 + G A CESC 116199221 + 116199201 116199241 41 TGCATTAAGAGCTTCCTGATTGAGATTCAGTGCATCAGCCG TGCATTAAGAGCTTCCTGATTAAGATTCAGTGCATCAGCCG < 41bp 0.512370265074156 0.870330270983814 0.65465635 0.9257511 prediction 0.715920011819315 Functional Gain - CAV1 ENSG00000105974 CDS Human protein_coding chr7:116199221 chr7:116199222 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20727 0 0 1 1 0 Ribosome 0.436329093384864 0.421366751344944 0.5421895 0 hPsi_site_14451 iPseU_CNN:0.5421895;iRNA_PseU:0 14452 chr17 6903694 6903694 1 + G A SKCM 6903693 + 6903673 6903713 41 GCTGACTTCATCCTTCTGGATGGAATTCCAGCCAACGTGAT GCTGACTTCATCCTTCTGGATAGAATTCCAGCCAACGTGAT < 41bp 0.457031820379616 0.857955481855695 0.32330906 0.44222552 prediction 0.71591096371139 Functional Gain - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6903693 chr17:6903694 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20728 0 0 0 0 1 Cytosol 0.438718196565368 0.438720535749483 0 0 hPsi_site_14452 iPseU_CNN:0;iRNA_PseU:0 14453 chr1 247588165 247588165 1 + G A LGG 247588164 + 247588144 247588184 41 TGGGGGCTCTGCTCTTTGGCTGCAGATGGAATCTGGAACCA TGGGGGCTCTGCTCTTTGGCTACAGATGGAATCTGGAACCA < 41bp 0.529825577880928 0.887780154979957 0.28495514 0.7029884 prediction 0.715909154198059 Functional Gain - NLRP3 ENSG00000162711 CDS Human protein_coding chr1:247588164 chr1:247588165 nonsynonymous SNV 0.827 5 22 hPsi_associated_SNPs_20729 0 0 0 0 0 Nucleus 0.438719499643237 0.438719553982073 0.4059768 0 hPsi_site_14453 iPseU_CNN:0.4059768;iRNA_PseU:0 14454 chr16 31488274 31488274 1 + G A THCA 31488273 + 31488253 31488293 41 GGGCTGCCAGGGCCCCATCCTGGATAACTACATCTCGGCGC GGGCTGCCAGGGCCCCATCCTAGATAACTACATCTCGGCGC < 41bp 0.530622937365902 0.888570829605935 0.220031 0.5149982 prediction 0.715895784480067 Functional Gain - TGFB1I1 ENSG00000140682 CDS Human protein_coding chr16:31488273 chr16:31488274 synonymous SNV . 0 22 hPsi_associated_SNPs_20730 0 0 0 0 1 Cytosol 0.438751818912189 0.438718592995073 0.0299963999999999 0 hPsi_site_14454 iPseU_CNN:0.0299963999999999;iRNA_PseU:0 14455 chr22 41617255 41617255 1 + G A ESCA 41617254 + 41617234 41617274 41 CTACCTCATGAAACGGCTGGTGGGCTCCAGGACGCTTCCCG CTACCTCATGAAACGGCTGGTAGGCTCCAGGACGCTTCCCG < 41bp 0.528701024285122 0.886635465040652 0.31837928 0.56298536 prediction 0.715868881511061 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41617254 chr22:41617255 synonymous SNV . 0 22 hPsi_associated_SNPs_20731 0 0 1 0 2 Ribosome 0.438718612211285 0.438641880669677 0.12597072 0 hPsi_site_14455 iPseU_CNN:0.12597072;iRNA_PseU:0 14456 chr7 45113081 45113081 1 + G A HNSC 45113080 + 45113060 45113100 41 TGCTTCCCTGAATCTGTGGATGTGGGTGGTGCATCACCCCA TGCTTCCCTGAATCTGTGGATATGGGTGGTGCATCACCCCA < 41bp 0.526800482502178 0.884726434377235 0.2528473 0.3283434 prediction 0.715851903750114 Functional Gain - CCM2 ENSG00000136280 CDS Human protein_coding chr7:45113080 chr7:45113081 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20732 0 0 1 0 2 Ribosome 0.438122018840925 0.438612192904113 0 0 hPsi_site_14456 iPseU_CNN:0;iRNA_PseU:0 14457 chr19 6921803 6921803 1 + G A STAD 6921802 + 6921782 6921822 41 GAAGATGGACATCCTTTGGCTGTGTGATCCTGGAAGCTTCT GAAGATGGACATCCTTTGGCTATGTGATCCTGGAAGCTTCT < 41bp 0.527355589369653 0.885273840678089 0.31381977 0.3210438 prediction 0.71583650261687 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6921802 chr19:6921803 nonsynonymous SNV 0.037 4 22 hPsi_associated_SNPs_20733 0 0 0 0 2 exosome 0.438729506668813 0.438748806073069 0 0 hPsi_site_14457 iPseU_CNN:0;iRNA_PseU:0 14458 chr1 165513610 165513610 1 + G A UCEC 165513609 + 165513589 165513629 41 GGCTGGTATCAGGGTCAAAGTGTCCAAATAATTGTCTGTGT GGCTGGTATCAGGGTCAAAGTATCCAAATAATTGTCTGTGT < 41bp 0.484721269358888 0.857912160842709 0.2601785 0.35191473 prediction 0.715824321685419 Functional Gain - LRRC52 ENSG00000162763 CDS Human protein_coding chr1:165513609 chr1:165513610 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_20734 0 0 0 0 0 unknown 0.438718591791539 0.438718541467775 0 0 hPsi_site_14458 iPseU_CNN:0;iRNA_PseU:0 14459 chr1 1269265 1269265 1 + G A KIRP 1269264 + 1269244 1269284 41 GCAGGCGGCCGAGATCTTCGTGGAGTCAGAACTGCCTCTGA GCAGGCGGCCGAGATCTTCGTAGAGTCAGAACTGCCTCTGA < 41bp 0.51713675358356 0.875048416043791 0.20444575 0.6494862 prediction 0.715823324920462 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269264 chr1:1269265 synonymous SNV . 0 22 hPsi_associated_SNPs_20735 0 0 0 0 0 chromatin 0.438718614335645 0.438726161984547 0.2989724 0 hPsi_site_14459 iPseU_CNN:0.2989724;iRNA_PseU:0 14460 chr11 61405001 61405001 1 + G A STAD 61405000 + 61404980 61405020 41 GCTGCAGCCCCTGTGGCTGCTGCCACCACAGCTGCTCCTGC GCTGCAGCCCCTGTGGCTGCTACCACCACAGCTGCTCCTGC < 41bp 0.521782540216961 0.879694108789144 0.22032699 0.6766498 prediction 0.715823137144365 Functional Gain - RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61405000 chr11:61405001 . . 0 22 hPsi_associated_SNPs_20736 0 0 0 0 0 unknown 0.438717162415164 0.437668070393175 0.3532996 0 hPsi_site_14460 iPseU_CNN:0.3532996;iRNA_PseU:0 14461 chr16 67286593 67286593 1 + G A COAD 67286592 + 67286572 67286612 41 CACCTTCTTCCTCTTCCTGCTGCCTCCTATTGTGTTGGACT CACCTTCTTCCTCTTCCTGCTACCTCCTATTGTGTTGGACT < 41bp 0.488821581555043 0.857903463499469 0.18159926 0.29702336 prediction 0.715806926998938 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67286592 chr16:67286593 synonymous SNV . 0 22 hPsi_associated_SNPs_20737 0 0 0 0 0 Cytosol 0.438718478049937 0.438719029063226 0 0 hPsi_site_14461 iPseU_CNN:0;iRNA_PseU:0 14462 chr3 169540241 169540241 1 + G A SKCM 169540240 + 169540220 169540260 41 TACCTGAAGCGAAACCAGTTTGAAGTTTTCCCCCAGGAGCT TACCTGAAGCGAAACCAGTTTAAAGTTTTCCCCCAGGAGCT < 41bp 0.510723188193635 0.868623299608744 0.448433 0.8401543 prediction 0.715800222830217 Functional Gain - LRRIQ4 ENSG00000188306 CDS Human protein_coding chr3:169540240 chr3:169540241 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20738 0 0 0 0 0 exosome 0.438718601061133 0.438718592995102 0.6803086 0 hPsi_site_14462 iPseU_CNN:0.6803086;iRNA_PseU:0 14463 chr19 19349121 19349121 1 + G A UCEC 19349120 + 19349100 19349140 41 GGCCACTGTTACCGCTATTTTGCCCACCGGAGGGCATGGGA GGCCACTGTTACCGCTATTTTACCCACCGGAGGGCATGGGA < 41bp 0.455468235393014 0.857898095932941 0.25039184 0.33968163 prediction 0.715796191865882 Functional Gain - NCAN ENSG00000130287 CDS Human protein_coding chr19:19349120 chr19:19349121 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_20739 0 0 0 0 2 exosome 0.438722912609914 0.438736244892069 0 0 hPsi_site_14463 iPseU_CNN:0;iRNA_PseU:0 14464 chr11 65713206 65713206 1 + G A rs186282504 65713205 + 65713185 65713225 41 GTTGGTTAGGACCCCGTCGGTGTGACCAGGGCAGGACGTGC GTTGGTTAGGACCCCGTCGGTATGACCAGGGCAGGACGTGC < 41bp 0.496114682846308 0.857887302318744 0.15561223 0.34994093 prediction 0.715774604637489 Functional Gain - TSGA10IP ENSG00000175513 CDS Human protein_coding chr11:65713205 chr11:65713206 unknown . 0 22 hPsi_associated_SNPs_20740 0 0 0 1 1 exosome 0.438717516662734 0.438716567287533 0 0 hPsi_site_14464 iPseU_CNN:0;iRNA_PseU:0 14465 chr19 52869553 52869553 1 + G A OV 52869552 + 52869532 52869572 41 TCGGGACTTACTACCCATCTTGTAATCCATACTGGAGAGAA TCGGGACTTACTACCCATCTTATAATCCATACTGGAGAGAA < 41bp 0.483873675346789 0.857885563833361 0.19162086 0.35163343 prediction 0.715771127666722 Functional Gain - ZNF610 ENSG00000167554 CDS Human protein_coding chr19:52869552 chr19:52869553 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_20741 0 0 0 0 0 exosome 0.438718593026879 0.438718593018169 0 0 hPsi_site_14465 iPseU_CNN:0;iRNA_PseU:0 14466 chr19 44612069 44612069 1 + C T BLCA 44612070 - 44612050 44612090 41 CTCCAGTGTGCACTCTTTGATGAGAATGAAGCTGTGAATTC CTCCAGTGTGCACTCTTTGATAAGAATGAAGCTGTGAATTC < 41bp 0.503882695520909 0.861765126063499 0.21031234 0.29928932 prediction 0.715764861085179 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612070 chr19:44612069 nonsynonymous SNV 0.035 4 22 hPsi_associated_SNPs_20742 0 0 1 0 0 nucleus 0.438610033192317 0.438596452042617 0 0 hPsi_site_14466 iPseU_CNN:0;iRNA_PseU:0 14467 chr17 38145067 38145067 1 + G A rs9913561 38145066 + 38145046 38145086 41 CCTGGACAAGCTGGATGTGGTGCGCAGGTACAGGCAGCCAA CCTGGACAAGCTGGATGTGGTACGCAGGTACAGGCAGCCAA < 41bp 0.471923548901709 0.857880824721631 0.2020795 0.52633256 prediction 0.715761649443263 Functional Gain - PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38145066 chr17:38145067 synonymous SNV . 0 22 hPsi_associated_SNPs_20743 0 0 1 0 1 Ribosome 0.438719305977162 0.438723352472634 0.0526651199999999 0 hPsi_site_14467 iPseU_CNN:0.0526651199999999;iRNA_PseU:0 14468 chr14 74825094 74825094 1 + G A UCEC 74825093 + 74825073 74825113 41 CCGCCTCCGCTACCCCAGCCTGTCACCTTCTGCCTTTTGGG CCGCCTCCGCTACCCCAGCCTATCACCTTCTGCCTTTTGGG < 41bp 0.4775518929547 0.85786594137584 0.16553584 0.20753193 prediction 0.715731882751681 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74825093 chr14:74825094 synonymous SNV . 0 22 hPsi_associated_SNPs_20744 0 0 0 0 0 unknown 0.438718807886659 0.438718779528085 0 0 hPsi_site_14468 iPseU_CNN:0;iRNA_PseU:0 14469 chr6 74072594 74072594 1 + G A BRCA 74072593 + 74072573 74072613 41 AATCCGAAGGTAGTTCGCCTTGAGGTTTGGCTGGTGGAAAA AATCCGAAGGTAGTTCGCCTTAAGGTTTGGCTGGTGGAAAA < 41bp 0.510125767580108 0.867974483182167 0.2058725 0.2606032 prediction 0.715697431204117 Functional Gain - KHDC3L ENSG00000203908 CDS Human protein_coding chr6:74072593 chr6:74072594 nonsynonymous SNV 0.226 4 22 hPsi_associated_SNPs_20745 0 0 0 0 1 unknown 0.438718592984362 0.438718592950185 0 0 hPsi_site_14469 iPseU_CNN:0;iRNA_PseU:0 14470 chr14 78392234 78392234 1 + G A UCEC 78392233 + 78392213 78392253 41 ATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCG ATCTCTACCCCTTGTTTGCCTACATGCTGACGGCGCGATCG < 41bp 0.52855490795952 0.886387769813404 0.19675004 0.45031074 prediction 0.715665723707768 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78392233 chr14:78392234 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_20746 0 0 0 1 0 chromatin 0.438717679249969 0.438714605828128 0 0 hPsi_site_14470 iPseU_CNN:0;iRNA_PseU:0 14471 chr1 45806809 45806809 1 + G A UCEC 45806808 + 45806788 45806828 41 CCAGGTTCCCGTAGTGGATGTGCAAAGCAACAACTTCAAGG CCAGGTTCCCGTAGTGGATGTACAAAGCAACAACTTCAAGG < 41bp 0.475700043311719 0.857823385035233 0.54854035 0.81289995 prediction 0.715646770070467 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45806808 chr1:45806809 synonymous SNV . 0 22 hPsi_associated_SNPs_20747 0 0 1 1 2 Ribosome 0.438558688674969 0.438615046956366 0.5287192 0 hPsi_site_14471 iPseU_CNN:0.5287192;iRNA_PseU:0 14472 chr17 6021355 6021355 1 + G A rs73347081 6021354 + 6021334 6021374 41 CGGAGCCGACGCACCATCTGTGTCAAAACCCACGAGAGTGG CGGAGCCGACGCACCATCTGTATCAAAACCCACGAGAGTGG < 41bp 0.456521064903115 0.857817352957944 0.375818 0.7088903 prediction 0.715634705915888 Functional Gain - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6021354 chr17:6021355 nonsynonymous SNV 0.868 1 22 hPsi_associated_SNPs_20748 0 0 0 0 0 exosome 0.436827036047384 0.437502625129821 0.4177806 0 hPsi_site_14472 iPseU_CNN:0.4177806;iRNA_PseU:0 14473 chr1 71512943 71512943 1 + G A LUAD 71512942 + 71512922 71512962 41 CACGACGATGACGACCGGGGTGGTGAGAAGCTGCCCGACCA CACGACGATGACGACCGGGGTAGTGAGAAGCTGCCCGACCA < 41bp 0.477970543649219 0.857811764222757 0.27277714 0.6558903 prediction 0.715623528445515 Functional Gain - PTGER3 ENSG00000050628 CDS Human protein_coding chr1:71512942 chr1:71512943 synonymous SNV . 0 22 hPsi_associated_SNPs_20749 0 0 0 0 0 Endoplasmic reticulum 0.4387185923221 0.43871396329857 0.3117806 0 hPsi_site_14473 iPseU_CNN:0.3117806;iRNA_PseU:0 14474 chr11 67378666 67378666 1 + G A BLCA 67378665 + 67378645 67378685 41 GTGCCCTTGAAAGAACTGATTGAGAAGCATGCTGGTAAGGC GTGCCCTTGAAAGAACTGATTAAGAAGCATGCTGGTAAGGC < 41bp 0.470871531650575 0.857808756548636 0.14433789 0.20104945 prediction 0.715617513097272 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378665 chr11:67378666 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20750 0 0 1 0 1 Ribosome 0.439008239646092 0.438769356122733 0 0 hPsi_site_14474 iPseU_CNN:0;iRNA_PseU:0 14475 chrX 64955184 64955184 1 + G A UCEC 64955183 + 64955163 64955203 41 ACAAGCGGATCTTGGCCTTGTGCATGGGGAACCATGAACTA ACAAGCGGATCTTGGCCTTGTACATGGGGAACCATGAACTA < 41bp 0.532146651454316 0.889947762581188 0.2620333 0.47858712 prediction 0.715602222253743 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64955183 chrX:64955184 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20751 0 0 1 0 1 Ribosome 0.438714152271202 0.438740800685665 0 0 hPsi_site_14475 iPseU_CNN:0;iRNA_PseU:0 14476 chr5 178294060 178294060 1 + G A rs11955074 178294059 + 178294039 178294079 41 GTGGAGAAAGACAGTTCTGGTGTCTCCTCTCTAGGTAAGTG GTGGAGAAAGACAGTTCTGGTATCTCCTCTCTAGGTAAGTG < 41bp 0.478613667410207 0.85779235421739 0.29924297 0.6523998 prediction 0.715584708434781 Functional Gain - ZNF354B ENSG00000178338 CDS Human protein_coding chr5:178294059 chr5:178294060 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20752 0 0 1 0 2 nucleoplasm 0.43871859299429 0.43871859299519 0.3047996 0 hPsi_site_14476 iPseU_CNN:0.3047996;iRNA_PseU:0 14477 chr10 73039676 73039676 1 + G A ESCA 73039675 + 73039655 73039695 41 GAGCCACAGGACGCCTACATTGTGAAGAACAAGCCTGTGGA GAGCCACAGGACGCCTACATTATGAAGAACAAGCCTGTGGA < 41bp 0.524974981955497 0.882755673908881 0.29148436 0.29304302 prediction 0.715561383906767 Functional Gain - UNC5B ENSG00000107731 CDS Human protein_coding chr10:73039675 chr10:73039676 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_20753 0 0 1 0 1 nucleoplasm 0.439044388915243 0.435120487542415 0 0 hPsi_site_14477 iPseU_CNN:0;iRNA_PseU:0 14478 chr17 48184467 48184467 1 + G A SKCM 48184466 + 48184446 48184486 41 ACGACATGGCTAAGCTCCTGTGTGACAAGTATTACATGGCC ACGACATGGCTAAGCTCCTGTATGACAAGTATTACATGGCC < 41bp 0.460280732117677 0.857778384421898 0.26810104 0.3211226 prediction 0.715556768843795 Functional Gain - PDK2 ENSG00000005882 CDS Human protein_coding chr17:48184466 chr17:48184467 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20754 0 0 1 0 2 Ribosome 0.438718566106046 0.43871859278843 0 0 hPsi_site_14478 iPseU_CNN:0;iRNA_PseU:0 14479 chr16 4606781 4606781 1 + G A rs74005359 4606780 + 4606760 4606800 41 GTTGGAGAACCAGCTGGCCCTGCTGCAGGACCTGCCCTCCA GTTGGAGAACCAGCTGGCCCTACTGCAGGACCTGCCCTCCA < 41bp 0.520148745992318 0.87791713939974 0.21752244 0.39476043 prediction 0.715536786814845 Functional Gain - C16orf96 ENSG00000205832 CDS Human protein_coding chr16:4606780 chr16:4606781 synonymous SNV . 0 22 hPsi_associated_SNPs_20755 0 0 0 0 0 exosome 0.438774024987256 0.440093425211767 0 0 hPsi_site_14479 iPseU_CNN:0;iRNA_PseU:0 14480 chr1 33059177 33059177 1 + G A UCEC 33059176 + 33059156 33059196 41 AAAGACCAAACATTTGAGATTGTCACAGCCTTCTGAAGTTA AAAGACCAAACATTTGAGATTATCACAGCCTTCTGAAGTTA < 41bp 0.494651718980831 0.857766298034282 0.32803196 0.37155074 prediction 0.715532596068565 Functional Gain - ZBTB8A ENSG00000160062 CDS Human protein_coding chr1:33059176 chr1:33059177 synonymous SNV . 0 22 hPsi_associated_SNPs_20756 0 0 0 0 0 Nucleus 0.436999049886338 0.427586784277053 0 0 hPsi_site_14480 iPseU_CNN:0;iRNA_PseU:0 14481 chr1 161130796 161130796 1 + G A BLCA 161130795 + 161130775 161130815 41 CAGTGGGGACTTGCGTCCAATGGGGATTGCCTTGGGAGGGC CAGTGGGGACTTGCGTCCAATAGGGATTGCCTTGGGAGGGC < 41bp 0.463287111207444 0.85776510004707 0.16091502 0.2457695 prediction 0.71553020009414 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130795 chr1:161130796 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20757 0 0 1 0 0 Cytosol 0.438718594184154 0.438718592841016 0 0 hPsi_site_14481 iPseU_CNN:0;iRNA_PseU:0 14482 chr17 19284071 19284071 1 + G A rs2233074 19284070 + 19284050 19284090 41 TCAGGTCATCCACCGTGACCTGAAGCCCTCCAACCTATTGG TCAGGTCATCCACCGTGACCTAAAGCCCTCCAACCTATTGG < 41bp 0.470319212031017 0.85775314229889 0.32808113 0.40494817 prediction 0.715506284597779 Functional Gain - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19284070 chr17:19284071 synonymous SNV . 0 22 hPsi_associated_SNPs_20758 0 0 1 0 0 exosome 0.438718592992796 0.438718592995102 0 0 hPsi_site_14482 iPseU_CNN:0;iRNA_PseU:0 14483 chr12 113496153 113496153 1 + G A GBM 113496152 + 113496132 113496172 41 CCACCACATTGAGAACGTGCTGAAGGAGGACGCTCGCGGTT CCACCACATTGAGAACGTGCTAAAGGAGGACGCTCGCGGTT < 41bp 0.512090900858401 0.869842239277344 0.32916975 0.7072067 prediction 0.715502676837887 Functional Gain - DTX1 ENSG00000135144 CDS Human protein_coding chr12:113496152 chr12:113496153 synonymous SNV . 0 22 hPsi_associated_SNPs_20759 0 0 0 0 0 Endoplasmic reticulum 0.438615298801234 0.4383152205481 0.4144134 0 hPsi_site_14483 iPseU_CNN:0.4144134;iRNA_PseU:0 14484 chr1 93575920 93575920 1 + G A LUSC 93575919 + 93575899 93575939 41 AAAAAGCCAGCATGTAAATTTGAAGAGGGTCAGGATGTCCT AAAAAGCCAGCATGTAAATTTAAAGAGGGTCAGGATGTCCT < 41bp 0.493060153540372 0.85774431447894 0.51147443 0.40433788 prediction 0.71548862895788 Functional Gain - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93575919 chr1:93575920 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20760 0 0 1 0 1 Cytosol 0.43871866181546 0.438718593025322 0 0 hPsi_site_14484 iPseU_CNN:0;iRNA_PseU:0 14485 chr2 171572999 171572999 1 + G A BLCA 171572998 + 171572978 171573018 41 CCCGCATCCCAGCTTGGGGCTGACGCCGCAGAAGACGCACC CCCGCATCCCAGCTTGGGGCTAACGCCGCAGAAGACGCACC < 41bp 0.490385514782237 0.857729694790533 0.20084721 0.5381663 prediction 0.715459389581066 Functional Gain - SP5 ENSG00000204335 CDS Human protein_coding chr2:171572998 chr2:171572999 synonymous SNV . 0 22 hPsi_associated_SNPs_20761 0 0 1 0 0 insoluble cytoplasm 0.438718593112598 0.43871859299454 0.0763326 0 hPsi_site_14485 iPseU_CNN:0.0763326;iRNA_PseU:0 14486 chr11 64064995 64064995 1 + G A LUSC 64064994 + 64064974 64065014 41 GTCGGCGATGCTTTTCCTGCTGATCGGCTGCCTGCTCTTTG GTCGGCGATGCTTTTCCTGCTAATCGGCTGCCTGCTCTTTG < 41bp 0.470648004923179 0.857727040790975 0.28507507 0.5442194 prediction 0.71545408158195 Functional Gain - KCNK4 ENSG00000182450 CDS Human protein_coding chr11:64064994 chr11:64064995 synonymous SNV . 0 22 hPsi_associated_SNPs_20762 0 0 0 0 1 exosome 0.438720844139488 0.438717489211876 0.0884388 0 hPsi_site_14486 iPseU_CNN:0.0884388;iRNA_PseU:0 14487 chr16 88644051 88644051 1 + G A UCEC 88644050 + 88644030 88644070 41 GGGAAGGCTGGTGTTCAGAGTGTGGGAGAAAAGGAATCCCT GGGAAGGCTGGTGTTCAGAGTATGGGAGAAAAGGAATCCCT < 41bp 0.518639472363705 0.876358790578021 0.2788416 0.59863245 prediction 0.715438636428632 Functional Gain - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88644050 chr16:88644051 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_20763 0 0 1 0 1 chromatin 0.438334035570769 0.438711521533199 0.1972649 0 hPsi_site_14487 iPseU_CNN:0.1972649;iRNA_PseU:0 14488 chr4 17586704 17586704 1 + G A UCEC 17586703 + 17586683 17586723 41 ATGACGCCAACCAGATTTGCTGAAATTATTGAGAAGAATCT ATGACGCCAACCAGATTTGCTAAAATTATTGAGAAGAATCT < 41bp 0.519275042639654 0.876988295130087 0.21933198 0.2612399 prediction 0.715426504980866 Functional Gain - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17586703 chr4:17586704 nonsynonymous SNV 0.723 0 22 hPsi_associated_SNPs_20764 0 0 1 0 1 Ribosome 0.4387185704568 0.438718608612938 0 0 hPsi_site_14488 iPseU_CNN:0;iRNA_PseU:0 14489 chr9 125438029 125438029 1 + G A HNSC 125438028 + 125438008 125438048 41 GACAGAAGGGCTGGCCTCTGTGATGGCTCCATTTGTCTGTA GACAGAAGGGCTGGCCTCTGTAATGGCTCCATTTGTCTGTA < 41bp 0.494676754010574 0.857711788110465 0.39640522 0.7943338 prediction 0.71542357622093 Functional Gain - OR1L3 ENSG00000171481 CDS Human protein_coding chr9:125438028 chr9:125438029 synonymous SNV . 0 22 hPsi_associated_SNPs_20765 0 0 0 0 0 unknown 0.438718597315177 0.438700172037917 0.5886676 0 hPsi_site_14489 iPseU_CNN:0.5886676;iRNA_PseU:0 14490 chr3 183014842 183014842 1 + G A LAML 183014841 + 183014821 183014861 41 CAACGGGTACTCCTTGACTGTGCCCAGGAATGTCGCAATGT CAACGGGTACTCCTTGACTGTACCCAGGAATGTCGCAATGT < 41bp 0.490632932654379 0.85769895632581 0.19660237 0.5470599 prediction 0.715397912651621 Functional Gain - MCF2L2 ENSG00000053524 CDS Human protein_coding chr3:183014841 chr3:183014842 synonymous SNV . 0 22 hPsi_associated_SNPs_20766 0 0 0 0 0 Nucleus 0.43952349947099 0.435947477078945 0.0941198000000001 0 hPsi_site_14490 iPseU_CNN:0.0941198000000001;iRNA_PseU:0 14491 chr20 33509173 33509173 1 + G A ESCA 33509172 + 33509152 33509192 41 CAGGTGTTAGGCACAGTGGGTGAACCCATCAACCCTGAGGC CAGGTGTTAGGCACAGTGGGTAAACCCATCAACCCTGAGGC < 41bp 0.528936006853353 0.886624262081227 0.40821594 0.7758249 prediction 0.715376510455749 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33509172 chr20:33509173 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20767 0 0 0 0 2 Ribosome 0.438720492404335 0.438706730157623 0.5516498 0 hPsi_site_14491 iPseU_CNN:0.5516498;iRNA_PseU:0 14492 chr8 145169492 145169492 1 + G A UCEC 145169491 + 145169471 145169511 41 GAAGTTCGTGATACTGGCGCTGCAGCTGCTCCTGGCCTGCT GAAGTTCGTGATACTGGCGCTACAGCTGCTCCTGGCCTGCT < 41bp 0.466214300235904 0.857682810701847 0.34901688 0.69261134 prediction 0.715365621403694 Functional Gain - WDR97 ENSG00000179698 CDS Human protein_coding chr8:145169491 chr8:145169492 synonymous SNV . 0 22 hPsi_associated_SNPs_20768 0 0 0 0 2 chromatin 0.437745026942826 0.429814915893512 0.38522268 0 hPsi_site_14492 iPseU_CNN:0.38522268;iRNA_PseU:0 14493 chr1 44442960 44442960 1 + G A KIRP 44442959 + 44442939 44442979 41 TACCCTCCTTCTGGAGAAGCTGAAGTGCTCTCCTTCTCTAC TACCCTCCTTCTGGAGAAGCTAAAGTGCTCTCCTTCTCTAC < 41bp 0.483900624398849 0.857681767548292 0.22385123 0.53803277 prediction 0.715363535096583 Functional Gain - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44442959 chr1:44442960 synonymous SNV . 0 22 hPsi_associated_SNPs_20769 0 0 1 0 0 Ribosome 0.438718592929446 0.438718573176374 0.0760655400000001 0 hPsi_site_14493 iPseU_CNN:0.0760655400000001;iRNA_PseU:0 14494 chr17 40958808 40958808 1 + G A BLCA 40958807 + 40958787 40958827 41 AGCCTGTTGAGGGCTTCAATTGAGAACTCCACTCCCAGTCA AGCCTGTTGAGGGCTTCAATTAAGAACTCCACTCCCAGTCA < 41bp 0.488186489701612 0.857679414197926 0.34638909 0.6532204 prediction 0.715358828395852 Functional Gain - CNTD1 ENSG00000176563 CDS Human protein_coding chr17:40958807 chr17:40958808 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_20770 0 0 0 0 0 Cytosol 0.438906902366329 0.438718730971916 0.3064408 0 hPsi_site_14494 iPseU_CNN:0.3064408;iRNA_PseU:0 14495 chr10 97816696 97816696 1 + G A CESC 97816695 + 97816675 97816715 41 CGGCTGGCCAATGATTTGCTTGGAAAAGACTAAACTCTACA CGGCTGGCCAATGATTTGCTTAGAAAAGACTAAACTCTACA < 41bp 0.476994931378133 0.857670943120576 0.4433422 0.6958398 prediction 0.715341886241152 Functional Gain - CCNJ ENSG00000107443 CDS Human protein_coding chr10:97816695 chr10:97816696 synonymous SNV . 0 22 hPsi_associated_SNPs_20771 0 0 1 0 1 chromatin 0.439325851656432 0.439147817075904 0.3916796 0 hPsi_site_14495 iPseU_CNN:0.3916796;iRNA_PseU:0 14496 chr21 47545913 47545913 1 + G A rs2839114 47545912 + 47545892 47545932 41 GAAGACACGTGTGTTTGCGGTGGTCATCACGGACGGGCGCC GAAGACACGTGTGTTTGCGGTAGTCATCACGGACGGGCGCC < 41bp 0.460742240053208 0.857665693435273 0.22008997 0.32695496 prediction 0.715331386870545 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47545912 chr21:47545913 synonymous SNV . 0 22 hPsi_associated_SNPs_20772 3 0 0 0 0 Cytosol 0.437702480422546 0.438644493020561 0 0 hPsi_site_14496 iPseU_CNN:0;iRNA_PseU:0 14497 chr19 14067016 14067016 1 + G A rs77916080 14067015 + 14066995 14067035 41 TGACATCTACGTCAGCACCGTGGCCGTGCCACCGCCAGGCC TGACATCTACGTCAGCACCGTAGCCGTGCCACCGCCAGGCC < 41bp 0.456997156834526 0.857658422686703 0.26264715 0.6772999 prediction 0.715316845373405 Functional Gain - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14067015 chr19:14067016 synonymous SNV . 0 22 hPsi_associated_SNPs_20773 0 0 1 0 2 Cytosol 0.437893793966096 0.438802077224457 0.3545998 0 hPsi_site_14497 iPseU_CNN:0.3545998;iRNA_PseU:0 14498 chr17 74382950 74382950 1 + G A STAD 74382949 + 74382929 74382969 41 GCTATTGCTGTGCCGCCGGCTGCTGTCACCCATGAACCTGC GCTATTGCTGTGCCGCCGGCTACTGTCACCCATGAACCTGC < 41bp 0.518239559975024 0.875895529163836 0.2506504 0.37742403 prediction 0.715311938377623 Functional Gain - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74382949 chr17:74382950 synonymous SNV . 0 22 hPsi_associated_SNPs_20774 0 0 1 0 1 nucleolus 0.438718558919022 0.438728549539906 0 0 hPsi_site_14498 iPseU_CNN:0;iRNA_PseU:0 14499 chr20 43565293 43565293 1 + G A SARC 43565292 + 43565272 43565312 41 ATGCAGGTCCAGGAGCCGGCTGTGCACATCCCAGGACAGGA ATGCAGGTCCAGGAGCCGGCTATGCACATCCCAGGACAGGA < 41bp 0.457113873319733 0.85765546293286 0.24349448 0.33437034 prediction 0.71531092586572 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43565292 chr20:43565293 nonsynonymous SNV 0.093 3 22 hPsi_associated_SNPs_20775 0 0 1 0 2 chromatin 0.438719525672278 0.43873322318845 0 0 hPsi_site_14499 iPseU_CNN:0;iRNA_PseU:0 14500 chr11 4112878 4112878 1 + G A UCEC 4112877 + 4112857 4112897 41 AGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACAC AGTTGGGGACAGCCGAGCCCTACAAGCCAGCCGAAACACAC < 41bp 0.475665093945849 0.857654539513913 0.42809594 0.84070826 prediction 0.715309079027827 Functional Gain - STIM1 ENSG00000167323 CDS Human protein_coding chr11:4112877 chr11:4112878 synonymous SNV . 0 22 hPsi_associated_SNPs_20776 0 0 1 0 0 Endoplasmic reticulum 0.438716867762342 0.438717101973088 0.68141652 0 hPsi_site_14500 iPseU_CNN:0.68141652;iRNA_PseU:0 14501 chr12 7295807 7295807 1 + G A COAD 7295806 + 7295786 7295826 41 CTCACCCTGGAGGGGGATGATGTGGAGACCTTCAACCATGC CTCACCCTGGAGGGGGATGATATGGAGACCTTCAACCATGC < 41bp 0.463142566408755 0.857653658258869 0.3190375 0.35634103 prediction 0.715307316517738 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7295806 chr12:7295807 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20777 0 0 1 0 1 Endoplasmic reticulum 0.438718461836361 0.43871857807356 0 0 hPsi_site_14501 iPseU_CNN:0;iRNA_PseU:0 14502 chr15 22369202 22369202 1 + G A LUSC 22369201 + 22369181 22369221 41 TAGTGGTCTGATCTCTGTGGTGTGTTTGATTGCTCTGTTAA TAGTGGTCTGATCTCTGTGGTATGTTTGATTGCTCTGTTAA < 41bp 0.500639113884865 0.85828875124804 0.26960617 0.4600798 prediction 0.715299274726348 Functional Gain - OR4M2 ENSG00000182974 CDS Human protein_coding chr15:22369201 chr15:22369202 synonymous SNV . 0 22 hPsi_associated_SNPs_20778 0 0 0 0 0 unknown 0.438718591051977 0.438718592653658 0 0 hPsi_site_14502 iPseU_CNN:0;iRNA_PseU:0 14503 chr11 34482810 34482810 1 + G A PAAD 34482809 + 34482789 34482829 41 TTACTGCAGGGCCGCCTTTTTGCCTATCCTGACACTCACCG TTACTGCAGGGCCGCCTTTTTACCTATCCTGACACTCACCG < 41bp 0.529308556101229 0.886958013654358 0.34893125 0.60242486 prediction 0.715298915106257 Functional Gain - CAT ENSG00000121691 CDS Human protein_coding chr11:34482809 chr11:34482810 nonsynonymous SNV 0.930 3 22 hPsi_associated_SNPs_20779 0 0 1 0 1 Ribosome 0.438718569683421 0.438718590559709 0.20484972 0 hPsi_site_14503 iPseU_CNN:0.20484972;iRNA_PseU:0 14504 chr22 21800462 21800462 1 + G A LUAD 21800461 + 21800441 21800481 41 CCATGCCAGCGCCCACTACATGTACCGGCAGGAGGGCTACG CCATGCCAGCGCCCACTACATATACCGGCAGGAGGGCTACG < 41bp 0.518287500155308 0.875931440339758 0.2656686 0.31793153 prediction 0.715287880368899 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800461 chr22:21800462 nonsynonymous SNV 0.767 0 22 hPsi_associated_SNPs_20780 0 0 1 0 0 chromatin 0.438718592819509 0.438718592994347 0 0 hPsi_site_14504 iPseU_CNN:0;iRNA_PseU:0 14505 chr2 219266385 219266385 1 + G A rs2227249 219266384 + 219266364 219266404 41 GATGATGGGGAGGCCCTGCCTGCTCACAGCGGGGCGCCCCT GATGATGGGGAGGCCCTGCCTACTCACAGCGGGGCGCCCCT < 41bp 0.529255587121506 0.886898895650564 0.19779825 0.25933963 prediction 0.715286617058117 Functional Gain - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219266384 chr2:219266385 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_20781 0 0 1 0 2 Cytosol 0.438718592998559 0.438718593058271 0 0 hPsi_site_14505 iPseU_CNN:0;iRNA_PseU:0 14506 chr9 12821556 12821556 1 + G A UCEC 12821555 + 12821535 12821575 41 AGTCAGAGCACCTCCTTACGTGGCAGCTACAACAGCCTACA AGTCAGAGCACCTCCTTACGTAGCAGCTACAACAGCCTACA < 41bp 0.481099324718309 0.857636131209228 0.14741483 0.25115836 prediction 0.715272262418456 Functional Gain - LURAP1L ENSG00000153714 CDS Human protein_coding chr9:12821555 chr9:12821556 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20782 0 0 1 0 0 nucleus 0.438718592762561 0.43871853795846 0 0 hPsi_site_14506 iPseU_CNN:0;iRNA_PseU:0 14507 chr17 7324742 7324742 1 + G A SKCM 7324741 + 7324721 7324761 41 CTGGGCCCAGCAGTCATCCCTGAATTTTCCCGGCACCGCTC CTGGGCCCAGCAGTCATCCCTAAATTTTCCCGGCACCGCTC < 41bp 0.515816045380669 0.873451062358035 0.39245144 0.47398585 prediction 0.715270033954732 Functional Gain - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324741 chr17:7324742 nonsynonymous SNV 0.090 1 22 hPsi_associated_SNPs_20783 0 0 0 0 0 exosome 0.438719218276968 0.438718592995126 0 0 hPsi_site_14507 iPseU_CNN:0;iRNA_PseU:0 14508 chr1 160171065 160171065 1 + G A CESC 160171064 + 160171044 160171084 41 GTATGGATGGAAATGGACGATGAGGAGGACCTGCCTTCTGC GTATGGATGGAAATGGACGATAAGGAGGACCTGCCTTCTGC < 41bp 0.508603172301106 0.866237883441304 0.42365515 0.50373393 prediction 0.715269422280396 Functional Gain - CASQ1 ENSG00000143318 CDS Human protein_coding chr1:160171064 chr1:160171065 nonsynonymous SNV 0.935 1 22 hPsi_associated_SNPs_20784 0 0 0 0 1 exosome 0.439594376865546 0.438718359746804 0.00746785999999999 0 hPsi_site_14508 iPseU_CNN:0.00746785999999999;iRNA_PseU:0 14509 chr11 70319293 70319293 1 + G A LUAD 70319292 + 70319272 70319312 41 TCCCCAGAAGGGGGCTGGCTTGGAAGGCTAAAGACATCTGA TCCCCAGAAGGGGGCTGGCTTAGAAGGCTAAAGACATCTGA < 41bp 0.505083685058949 0.862718039406107 0.3215185 0.666857 prediction 0.715268708694316 Functional Gain - SHANK2 ENSG00000162105 CDS Human protein_coding chr11:70319292 chr11:70319293 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_20785 0 0 0 0 0 cytosol 0.4387185929951 0.438718592995102 0.333714 0 hPsi_site_14509 iPseU_CNN:0.333714;iRNA_PseU:0 14510 chr11 47594631 47594631 1 + C T UCEC 47594632 - 47594612 47594652 41 GCCCCATCCCTCTGGAAGATTGCCAGCTGTAACGGGAGCAT GCCCCATCCCTCTGGAAGATTACCAGCTGTAACGGGAGCAT < 41bp 0.474571621406893 0.857632360512543 0.22989663 0.25783783 prediction 0.715264721025087 Functional Gain - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594632 chr11:47594631 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_20786 0 0 0 0 0 nucleus 0.438583049068022 0.43827576784523 0 0 hPsi_site_14510 iPseU_CNN:0;iRNA_PseU:0 14511 chr17 42225813 42225813 1 + G A STAD 42225812 + 42225792 42225832 41 ATCTTGCCAGAAGGGGCCTGTGCCTGCCATCCACAAAGCGG ATCTTGCCAGAAGGGGCCTGTACCTGCCATCCACAAAGCGG < 41bp 0.527846389765669 0.885462686709862 0.25582188 0.8571912 prediction 0.715232593888387 Functional Gain - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225812 chr17:42225813 synonymous SNV . 0 22 hPsi_associated_SNPs_20787 0 0 0 0 0 chromatin 0.438716318712484 0.438690970362818 0.7143824 0 hPsi_site_14511 iPseU_CNN:0.7143824;iRNA_PseU:0 14512 chr4 17598725 17598725 1 + G A HNSC 17598724 + 17598704 17598744 41 AAGGCCAACAAGCCGGGGGATGTTGTTAGAGCCAAAAACGG AAGGCCAACAAGCCGGGGGATATTGTTAGAGCCAAAAACGG < 41bp 0.465279897778397 0.857609004933491 0.3371004 0.39882988 prediction 0.715218009866982 Functional Gain - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17598724 chr4:17598725 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_20788 0 0 1 0 2 Ribosome 0.438718591964922 0.438718592990793 0 0 hPsi_site_14512 iPseU_CNN:0;iRNA_PseU:0 14513 chr19 15052690 15052690 1 + G A UCEC 15052689 + 15052669 15052709 41 CGTGGCCATCTGTTACCCCCTGCACTACACGGTCATCATGA CGTGGCCATCTGTTACCCCCTACACTACACGGTCATCATGA < 41bp 0.488376349196665 0.857602846987893 0.5337834 0.9072348 prediction 0.715205693975785 Functional Gain - OR7C2 ENSG00000127529 CDS Human protein_coding chr19:15052689 chr19:15052690 synonymous SNV . 0 22 hPsi_associated_SNPs_20789 0 0 0 0 0 exosome 0.438727513152684 0.438712669465502 0.7469028 0 hPsi_site_14513 iPseU_CNN:0.7469028;iRNA_PseU:0 14514 chr19 35758329 35758329 1 + G A BLCA 35758328 + 35758308 35758348 41 CGCAGCCGGGACGACCTCTATGACCAAGACGACTCGAGGGA CGCAGCCGGGACGACCTCTATAACCAAGACGACTCGAGGGA < 41bp 0.467806307014937 0.85759667182086 0.13721064 0.2538535 prediction 0.715193343641719 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35758328 chr19:35758329 nonsynonymous SNV 0.473 0 22 hPsi_associated_SNPs_20790 0 0 1 0 0 chromatin 0.438718480672375 0.438718728366278 0 0 hPsi_site_14514 iPseU_CNN:0;iRNA_PseU:0 14515 chrX 130222624 130222624 1 + G A OV 130222623 + 130222603 130222643 41 TTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACTGCCCGTT TTCCTCTGAGGAGCCAGCTGTACCTTCCGGCACTGCCCGTT < 41bp 0.463123702213616 0.857596338006679 0.49020058 0.81966186 prediction 0.715192676013358 Functional Gain - ARHGAP36 ENSG00000147256 CDS Human protein_coding chrX:130222623 chrX:130222624 synonymous SNV . 0 22 hPsi_associated_SNPs_20791 0 0 0 0 1 unknown 0.438713671758777 0.432765111203094 0.63932372 0 hPsi_site_14515 iPseU_CNN:0.63932372;iRNA_PseU:0 14516 chr19 36430975 36430975 1 + G A BLCA 36430974 + 36430954 36430994 41 GGACATGACCTCCAACCGCCTGACCACAATCCCACCCGACC GGACATGACCTCCAACCGCCTAACCACAATCCCACCCGACC < 41bp 0.467342805581629 0.857589208474984 0.19454783 0.3912504 prediction 0.715178416949968 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430974 chr19:36430975 synonymous SNV . 0 22 hPsi_associated_SNPs_20792 0 0 1 0 0 nucleus 0.438662496607674 0.439312704521761 0 0 hPsi_site_14516 iPseU_CNN:0;iRNA_PseU:0 14517 chr7 114655773 114655773 1 + G A STAD 114655772 + 114655752 114655792 41 CCACTGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCC CCACTGTATCCTGGCTTGCTTATTCTGCGAATTCCTGACCC < 41bp 0.513020538207947 0.870599779371447 0.3909111 0.55551296 prediction 0.715158482326999 Functional Gain - MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655772 chr7:114655773 synonymous SNV . 0 22 hPsi_associated_SNPs_20793 0 0 1 0 1 Cytosol 0.438719168117409 0.438501552453435 0.11102592 0 hPsi_site_14517 iPseU_CNN:0.11102592;iRNA_PseU:0 14518 chr3 10976830 10976830 1 + G A COAD 10976829 + 10976809 10976849 41 TGGCCCTGTCCTCCATGCTCTGCATCCCGCTCTGGATCTGC TGGCCCTGTCCTCCATGCTCTACATCCCGCTCTGGATCTGC < 41bp 0.518721532475226 0.876298171834676 0.46017072 0.6827475 prediction 0.715153278718901 Functional Gain - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10976829 chr3:10976830 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_20794 0 0 0 0 1 cytosol 0.438718593379805 0.438718595841911 0.365495 0 hPsi_site_14518 iPseU_CNN:0.365495;iRNA_PseU:0 14519 chr19 18254654 18254654 1 + G A HNSC 18254653 + 18254633 18254673 41 GGGTCCCAGCCCATCTCTCCTGAATACCATCAGCCTGGACA GGGTCCCAGCCCATCTCTCCTAAATACCATCAGCCTGGACA < 41bp 0.46340680737174 0.857548486372269 0.22219428 0.29495156 prediction 0.715096972744537 Functional Gain - MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254653 chr19:18254654 synonymous SNV . 0 22 hPsi_associated_SNPs_20795 0 0 1 0 1 Cytosol 0.437493543406825 0.43871609539478 0 0 hPsi_site_14519 iPseU_CNN:0;iRNA_PseU:0 14520 chr9 34242067 34242067 1 + G A COAD 34242066 + 34242046 34242086 41 TTCCCTCTCTGTTTTGTCTGTGTGCACAGAGGAATCATCAC TTCCCTCTCTGTTTTGTCTGTATGCACAGAGGAATCATCAC < 41bp 0.472927488673822 0.857547130022005 0.3664914 0.38453323 prediction 0.715094260044009 Functional Gain - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34242066 chr9:34242067 synonymous SNV . 0 22 hPsi_associated_SNPs_20796 0 0 1 0 1 Ribosome 0.438781783189449 0.43911823334305 0 0 hPsi_site_14520 iPseU_CNN:0;iRNA_PseU:0 14521 chr5 10261753 10261753 1 + G A rs147989324 10261752 + 10261732 10261772 41 AAGCTGGGCTTTGCTGGTCTTGTACAGGAGATCTCATTTGG AAGCTGGGCTTTGCTGGTCTTATACAGGAGATCTCATTTGG < 41bp 0.45802495200372 0.857540211334866 0.342284 0.6707341 prediction 0.715080422669732 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10261752 chr5:10261753 nonsynonymous SNV 0.535 1 22 hPsi_associated_SNPs_20797 0 0 1 0 1 Cytosol 0.43938335127713 0.442724316726801 0.3414682 0 hPsi_site_14521 iPseU_CNN:0.3414682;iRNA_PseU:0 14522 chr10 50833555 50833555 1 + G A rs114090981 50833554 + 50833534 50833574 41 TGACTGTGCCAAAGGCCAGCTGTCAGGGCAGCCCCTTTGCA TGACTGTGCCAAAGGCCAGCTATCAGGGCAGCCCCTTTGCA < 41bp 0.460042517702597 0.857539298628546 0.29386884 0.7478251 prediction 0.715078597257093 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50833554 chr10:50833555 synonymous SNV . 0 22 hPsi_associated_SNPs_20798 0 0 0 0 1 unknown 0.438718524701989 0.438717701688706 0.4956502 0 hPsi_site_14522 iPseU_CNN:0.4956502;iRNA_PseU:0 14523 chr2 85818955 85818955 1 + G A HNSC 85818954 + 85818934 85818974 41 TGGTGTGAAGCTGGCCGAACTGCAGCAGCGTTCAGACCAAC TGGTGTGAAGCTGGCCGAACTACAGCAGCGTTCAGACCAAC < 41bp 0.487158213844041 0.857539128519384 0.28011608 0.3671928 prediction 0.715078257038768 Functional Gain - VAMP5 ENSG00000168899 CDS Human protein_coding chr2:85818954 chr2:85818955 synonymous SNV . 0 22 hPsi_associated_SNPs_20799 0 0 0 0 1 nucleoplasm 0.438811139901451 0.440134207930835 0 0 hPsi_site_14523 iPseU_CNN:0;iRNA_PseU:0 14524 chr20 4705644 4705644 1 + G A SKCM 4705643 + 4705623 4705663 41 CAAGCATTGCGAGTTTTGGTTGGAGAGGGGCGCAGGACTTC CAAGCATTGCGAGTTTTGGTTAGAGAGGGGCGCAGGACTTC < 41bp 0.472764798630883 0.857535888712688 0.48851657 0.81022376 prediction 0.715071777425377 Functional Gain - PRND ENSG00000171864 CDS Human protein_coding chr20:4705643 chr20:4705644 synonymous SNV . 0 22 hPsi_associated_SNPs_20800 0 0 0 0 0 Nucleus 0.439001346393141 0.438744627082898 0.62044752 0 hPsi_site_14524 iPseU_CNN:0.62044752;iRNA_PseU:0 14525 chr12 54427299 54427299 1 + G A SKCM 54427298 + 54427278 54427318 41 GACAGGGCAGCCCGCCGGACTGAGCCAGCCACCGGCCCCGC GACAGGGCAGCCCGCCGGACTAAGCCAGCCACCGGCCCCGC < 41bp 0.516049148200322 0.873583438365534 0.28173596 0.6417712 prediction 0.715068580330424 Functional Gain - HOXC5 ENSG00000172789 CDS Human protein_coding chr12:54427298 chr12:54427299 synonymous SNV . 0 22 hPsi_associated_SNPs_20801 0 0 0 0 1 exosome 0.438718592995104 0.438718592882957 0.2835424 0 hPsi_site_14525 iPseU_CNN:0.2835424;iRNA_PseU:0 14526 chr21 41137503 41137503 1 + G A SARC 41137502 + 41137482 41137522 41 GTCATAGAAGGCCCCCAAAATGCAAGAGTCCTGAAGGGCTC GTCATAGAAGGCCCCCAAAATACAAGAGTCCTGAAGGGCTC < 41bp 0.471171172717395 0.857530117061153 0.29850268 0.37017143 prediction 0.715060234122307 Functional Gain - IGSF5 ENSG00000183067 CDS Human protein_coding chr21:41137502 chr21:41137503 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_20802 0 0 0 0 1 exosome 0.438718592716214 0.438718592931437 0 0 hPsi_site_14526 iPseU_CNN:0;iRNA_PseU:0 14527 chr14 20444469 20444469 1 + G A BLCA 20444468 + 20444448 20444488 41 GGCGAAGGCCCGCTCCACATTGACTGCTCACATCACTGTGG GGCGAAGGCCCGCTCCACATTAACTGCTCACATCACTGTGG < 41bp 0.491897262901262 0.857525922925907 0.24811503 0.34641847 prediction 0.715051845851813 Functional Gain - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20444468 chr14:20444469 synonymous SNV . 0 22 hPsi_associated_SNPs_20803 0 0 0 0 0 unknown 0.438577488804647 0.438718527380108 0 0 hPsi_site_14527 iPseU_CNN:0;iRNA_PseU:0 14528 chr3 120469643 120469643 1 + G A LIHC 120469642 + 120469622 120469662 41 AGAATGAGGGTAGAGACTGCTGCAGACGGGAAAACCACTCG AGAATGAGGGTAGAGACTGCTACAGACGGGAAAACCACTCG < 41bp 0.520489789763743 0.878003697240748 0.30183697 0.6564107 prediction 0.71502781495401 Functional Gain - GTF2E1 ENSG00000153767 CDS Human protein_coding chr3:120469642 chr3:120469643 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_20804 0 0 1 0 0 Cytosol 0.438695115546319 0.438717930813522 0.3128214 0 hPsi_site_14528 iPseU_CNN:0.3128214;iRNA_PseU:0 14529 chr19 44037364 44037364 1 + G A rs145663230 44037363 + 44037343 44037383 41 TTCGCGCTTGCTCACGAACTTGCCTGCCTGGCTGGCGCACC TTCGCGCTTGCTCACGAACTTACCTGCCTGGCTGGCGCACC < 41bp 0.511542809342953 0.869043834017033 0.23606336 0.42207152 prediction 0.715002049348161 Functional Gain - ZNF575 ENSG00000176472 UTR5 Human protein_coding chr19:44037363 chr19:44037364 . . 0 22 hPsi_associated_SNPs_20805 0 0 0 0 0 exosome 0.438718592995082 0.438718592985149 0 0 hPsi_site_14529 iPseU_CNN:0;iRNA_PseU:0 14530 chr15 91434888 91434888 1 + G A LUSC 91434887 + 91434867 91434907 41 CAAGAAGAGTGGTGTTGTCCTGCACAGGGCTGTGCCCAAGG CAAGAAGAGTGGTGTTGTCCTACACAGGGCTGTGCCCAAGG < 41bp 0.47470205990478 0.857488343227272 0.26413774 0.32565272 prediction 0.714976686454544 Functional Gain - FES ENSG00000182511 CDS Human protein_coding chr15:91434887 chr15:91434888 synonymous SNV . 0 22 hPsi_associated_SNPs_20806 0 0 0 0 1 cytosol 0.438694467323042 0.438716777082457 0 0 hPsi_site_14530 iPseU_CNN:0;iRNA_PseU:0 14531 chr4 115544082 115544082 1 + G A LUSC 115544081 + 115544061 115544101 41 ATTCTCCTGTGGAGTGCTGTTGGGATAGCGAAGGCTGCCAA ATTCTCCTGTGGAGTGCTGTTAGGATAGCGAAGGCTGCCAA < 41bp 0.48757002014748 0.857487787795294 0.26053932 0.41967726 prediction 0.714975575590588 Functional Gain - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544081 chr4:115544082 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20807 0 0 1 0 0 Ribosome 0.438787174449539 0.438718616928321 0 0 hPsi_site_14531 iPseU_CNN:0;iRNA_PseU:0 14532 chr19 16060028 16060028 1 + G A LUAD 16060027 + 16060007 16060047 41 TTGTGCACCCTCTCCGTCTCTGAGATTCTGTTCACTGTTGC TTGTGCACCCTCTCCGTCTCTAAGATTCTGTTCACTGTTGC < 41bp 0.494611919882483 0.857484943706377 0.30869877 0.40855503 prediction 0.714969887412753 Functional Gain - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060027 chr19:16060028 nonsynonymous SNV 0.021 1 22 hPsi_associated_SNPs_20808 0 0 0 0 0 unknown 0.438720019133331 0.438717060893364 0 0 hPsi_site_14532 iPseU_CNN:0;iRNA_PseU:0 14533 chr10 134261527 134261527 1 + G A BRCA 134261526 + 134261506 134261546 41 GGCCTGTGGGAACAGGCGTCTGTTAGTCAGGGTTTCAGGAA GGCCTGTGGGAACAGGCGTCTATTAGTCAGGGTTTCAGGAA < 41bp 0.487033128249466 0.857478949613395 0.24869916 0.41204017 prediction 0.71495789922679 Functional Gain - C10orf91 ENSG00000180066 CDS Human lincRNA chr10:134261526 chr10:134261527 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_20809 0 0 0 0 0 unknown 0.438718585799977 0.438718593413089 0 0 hPsi_site_14533 iPseU_CNN:0;iRNA_PseU:0 14534 chr5 102518985 102518985 1 + G A UCEC 102518984 + 102518964 102519004 41 AGAGGGTACTGGTACCTGGCTGCATTATACCAGTGGTGTGG AGAGGGTACTGGTACCTGGCTACATTATACCAGTGGTGTGG < 41bp 0.492900852410496 0.857469194751987 0.2871509 0.7640753 prediction 0.714938389503973 Functional Gain - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102518984 chr5:102518985 synonymous SNV . 0 22 hPsi_associated_SNPs_20810 0 0 1 0 1 Cytosol 0.438718592995108 0.438718592995102 0.5281506 0 hPsi_site_14534 iPseU_CNN:0.5281506;iRNA_PseU:0 14535 chr17 34067503 34067503 1 + G A SKCM 34067502 + 34067482 34067522 41 GTCTACGACATCTGCTGCTTTGACAGCTTTGAGTACGTCAA GTCTACGACATCTGCTGCTTTAACAGCTTTGAGTACGTCAA < 41bp 0.524879650370353 0.882343665179454 0.2466074 0.26856953 prediction 0.714928029618202 Functional Gain - RASL10B ENSG00000141150 CDS Human other chr17:34067502 chr17:34067503 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20811 0 0 1 0 2 insoluble cytoplasm 0.441345708361128 0.437611384790739 0 0 hPsi_site_14535 iPseU_CNN:0;iRNA_PseU:0 14536 chr12 32458634 32458634 1 + G A BLCA 32458633 + 32458613 32458653 41 TTATCCTGTCTGATTCAGGTTGAATACGAAGGCTTAAAGCA TTATCCTGTCTGATTCAGGTTAAATACGAAGGCTTAAAGCA < 41bp 0.507801518821047 0.865242706255121 0.4142655 0.6711116 prediction 0.71488237486815 Functional Gain - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32458633 chr12:32458634 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20812 0 0 0 1 1 Nucleus 0.438716556087593 0.438123963791067 0.3422232 0 hPsi_site_14536 iPseU_CNN:0.3422232;iRNA_PseU:0 14537 chr17 42085835 42085835 1 + G A LIHC 42085834 + 42085814 42085854 41 AGGTACTTCAAACACAGTGATGGCAGCTTCTCCAACAAGCA AGGTACTTCAAACACAGTGATAGCAGCTTCTCCAACAAGCA < 41bp 0.488937095391742 0.857434417326887 0.14647567 0.18960992 prediction 0.714868834653774 Functional Gain - NAGS ENSG00000161653 CDS Human protein_coding chr17:42085834 chr17:42085835 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_20813 0 0 0 0 1 Cytosol 0.43921962034852 0.438569876263695 0 0 hPsi_site_14537 iPseU_CNN:0;iRNA_PseU:0 14538 chr9 125281885 125281885 1 + G A GBM 125281884 + 125281864 125281904 41 TGGATCCTCTCCTGTACCAATGCCCTGTCTCACACTCTCCT TGGATCCTCTCCTGTACCAATACCCTGTCTCACACTCTCCT < 41bp 0.492619831322337 0.857419840293292 0.22779611 0.48541906 prediction 0.714839680586584 Functional Gain - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125281884 chr9:125281885 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_20814 0 0 0 0 0 exosome 0.438718598974542 0.438718613244223 0 0 hPsi_site_14538 iPseU_CNN:0;iRNA_PseU:0 14539 chr5 180582179 180582179 1 + G A PRAD 180582178 + 180582158 180582198 41 CATGTTGGTCTGTACCAATGTGCCAAAGATGGCAGCCAACT CATGTTGGTCTGTACCAATGTACCAAAGATGGCAGCCAACT < 41bp 0.509564495375032 0.866983335616124 0.33525047 0.55618423 prediction 0.714837680482185 Functional Gain - OR2V2 ENSG00000182613 CDS Human protein_coding chr5:180582178 chr5:180582179 synonymous SNV . 0 22 hPsi_associated_SNPs_20815 0 0 0 0 0 unknown 0.43871859299496 0.438718592984927 0.11236846 0 hPsi_site_14539 iPseU_CNN:0.11236846;iRNA_PseU:0 14540 chr19 10793282 10793282 1 + G A BLCA 10793281 + 10793261 10793301 41 AGCAAGGGGGAGGACTCGGCTGAGGAGACCGAGGCGAAGCC AGCAAGGGGGAGGACTCGGCTAAGGAGACCGAGGCGAAGCC < 41bp 0.463069026303018 0.857415558135863 0.3476116 0.48500028 prediction 0.714831116271725 Functional Gain - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10793281 chr19:10793282 nonsynonymous SNV 0.017 1 22 hPsi_associated_SNPs_20816 0 0 1 0 2 Cytosol 0.438622660249637 0.438719757498384 0 0 hPsi_site_14540 iPseU_CNN:0;iRNA_PseU:0 14541 chr9 84607012 84607012 1 + G A READ 84607011 + 84606991 84607031 41 ACAAATACATCTATATCCCATGAATCCCCAGTACTTCCCCC ACAAATACATCTATATCCCATAAATCCCCAGTACTTCCCCC < 41bp 0.486741873801254 0.857410256993259 0.26978606 0.3007404 prediction 0.714820513986519 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84607011 chr9:84607012 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20817 0 0 0 0 0 exosome 0.438718593293924 0.438718592995133 0 0 hPsi_site_14541 iPseU_CNN:0;iRNA_PseU:0 14542 chr11 18159179 18159179 1 + G A BLCA 18159178 + 18159158 18159198 41 TACCTGTCATCAGTCATGTGTGTCCTGCTCTGGGCCCTGTC TACCTGTCATCAGTCATGTGTATCCTGCTCTGGGCCCTGTC < 41bp 0.523778361993829 0.881186932170349 0.38559812 0.46453643 prediction 0.71481714035304 Functional Gain - MRGPRX3 ENSG00000179826 CDS Human protein_coding chr11:18159178 chr11:18159179 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_20818 0 0 0 0 0 exosome 0.43846171017982 0.438652369206718 0 0 hPsi_site_14542 iPseU_CNN:0;iRNA_PseU:0 14543 chr19 36159496 36159496 1 + C T BLCA 36159497 - 36159477 36159517 41 CACACCAAAACTGGCTACCATGAAGAAGGAGAAGCCGCAGA CACACCAAAACTGGCTACCATAAAGAAGGAGAAGCCGCAGA < 41bp 0.479135330677184 0.857408093154445 0.22288287 0.3295709 prediction 0.71481618630889 Functional Gain - UPK1A ENSG00000105668 CDS Human protein_coding chr19:36159497 chr19:36159496 synonymous SNV . 0 22 hPsi_associated_SNPs_20819 0 0 0 0 0 exosome 0.438718593518113 0.438718524310886 0 0 hPsi_site_14543 iPseU_CNN:0;iRNA_PseU:0 14544 chr15 74425230 74425230 1 + G A UCEC 74425229 + 74425209 74425249 41 TTACAAAGAGTTGCGTGAGGTGCCGGAAGGACTGCCTGCCA TTACAAAGAGTTGCGTGAGGTACCGGAAGGACTGCCTGCCA < 41bp 0.519549115248338 0.876951642857699 0.3041042 0.91833556 prediction 0.714805055218722 Functional Gain - ISLR2 ENSG00000167178 CDS Human protein_coding chr15:74425229 chr15:74425230 synonymous SNV . 0 22 hPsi_associated_SNPs_20820 0 0 0 0 0 Nucleus 0.43871859237256 0.438718590372428 0.83667112 0 hPsi_site_14544 iPseU_CNN:0.83667112;iRNA_PseU:0 14545 chr1 26772898 26772898 1 + G A LGG 26772897 + 26772877 26772917 41 CAGGAGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTA CAGGAGCTGATTGCACAAGCTATACAGGCCACGAAGAACTA < 41bp 0.473930947926758 0.857394710921624 0.16504058 0.2717052 prediction 0.714789421843248 Functional Gain - DHDDS ENSG00000117682 CDS Human protein_coding chr1:26772897 chr1:26772898 nonsynonymous SNV 0.921 0 22 hPsi_associated_SNPs_20821 0 0 1 0 2 chromatin 0.438508266918344 0.438644200081627 0 0 hPsi_site_14545 iPseU_CNN:0;iRNA_PseU:0 14546 chr8 99169962 99169962 1 + G A BLCA 99169961 + 99169941 99169981 41 ATTGACCAGAGAGGCTTGCCTGTCCATCTTGGGCCACTTCC ATTGACCAGAGAGGCTTGCCTATCCATCTTGGGCCACTTCC < 41bp 0.482886202461744 0.85739189474501 0.29355806 0.5251296 prediction 0.71478378949002 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99169961 chr8:99169962 synonymous SNV . 0 22 hPsi_associated_SNPs_20822 0 0 1 0 0 Mitochondrion 0.438718598537869 0.438718594056349 0.0502591999999999 0 hPsi_site_14546 iPseU_CNN:0.0502591999999999;iRNA_PseU:0 14547 chr19 39960890 39960890 1 + G A STAD 39960889 + 39960869 39960909 41 GGAGGAGAATTTCGTTATCCTGTTCTCTGACCTCACCATGC GGAGGAGAATTTCGTTATCCTATTCTCTGACCTCACCATGC < 41bp 0.464118875948015 0.857389291133044 0.2512552 0.58494043 prediction 0.714778582266087 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39960889 chr19:39960890 synonymous SNV . 0 22 hPsi_associated_SNPs_20823 0 0 1 0 1 Nucleus 0.438717518093357 0.438706712850662 0.16988086 0 hPsi_site_14547 iPseU_CNN:0.16988086;iRNA_PseU:0 14548 chr11 124440230 124440230 1 + G A BRCA 124440229 + 124440209 124440249 41 ATCTGTCACTCATGGATCTCTGCTACTCCTCCGTCATTACC ATCTGTCACTCATGGATCTCTACTACTCCTCCGTCATTACC < 41bp 0.504237101109472 0.861621352170889 0.18278897 0.62477356 prediction 0.714768502122834 Functional Gain - OR8A1 ENSG00000196119 CDS Human protein_coding chr11:124440229 chr11:124440230 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_20824 0 0 0 0 0 exosome 0.436629306216157 0.438667537514663 0.24954712 0 hPsi_site_14548 iPseU_CNN:0.24954712;iRNA_PseU:0 14549 chr1 47489570 47489570 1 + G A UCEC 47489569 + 47489549 47489589 41 CTGCCTGGCCCTGGGGCTGCTGCAGGCCATTAAGCTGTACC CTGCCTGGCCCTGGGGCTGCTACAGGCCATTAAGCTGTACC < 41bp 0.492767498850174 0.857381115889656 0.24144313 0.31275457 prediction 0.714762231779313 Functional Gain - CYP4X1 ENSG00000186377 CDS Human protein_coding chr1:47489569 chr1:47489570 synonymous SNV . 0 22 hPsi_associated_SNPs_20825 0 0 0 0 1 Ribosome 0.438718606743081 0.438718592992753 0 0 hPsi_site_14549 iPseU_CNN:0;iRNA_PseU:0 14550 chr19 55815139 55815139 1 + G A LUSC 55815138 + 55815118 55815158 41 AGCATCACCGATGCCGGGGGTGGTGGCTCCCCTGTACCCAC AGCATCACCGATGCCGGGGGTAGTGGCTCCCCTGTACCCAC < 41bp 0.463267873548818 0.857318113834135 0.3375461 0.6933453 prediction 0.714636227668271 Functional Gain - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55815138 chr19:55815139 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_20826 0 0 1 0 1 chromatin 0.437956024938163 0.438717271091169 0.3866906 0 hPsi_site_14550 iPseU_CNN:0.3866906;iRNA_PseU:0 14551 chr17 16285753 16285753 1 + G A HNSC 16285752 + 16285732 16285772 41 CCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGA CCCAGTGACACCATCGAAAATATGAAGGCCAAGATCCAAGA < 41bp 0.479523439229507 0.857308483707098 0.35336792 0.3793591 prediction 0.714616967414197 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285752 chr17:16285753 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20827 0 0 0 0 1 Ribosome 0.43871856473697 0.438718570027577 0 0 hPsi_site_14551 iPseU_CNN:0;iRNA_PseU:0 14552 chr7 27856589 27856589 1 + G A LGG 27856588 + 27856568 27856608 41 TCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGC TCTTGGGGACTGGAAGACAATATTGTCTGCAGCCAGCCTGC < 41bp 0.46743003987913 0.857298726449571 0.24408767 0.26226136 prediction 0.714597452899142 Functional Gain - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27856588 chr7:27856589 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20828 0 0 1 0 2 Ribosome 0.438787945242269 0.439151179127681 0 0 hPsi_site_14552 iPseU_CNN:0;iRNA_PseU:0 14553 chr19 52447948 52447948 1 + G A SKCM 52447947 + 52447927 52447967 41 AATGTGACAAAGCATTCCGCTGGAAATCACAGCTCAATGCA AATGTGACAAAGCATTCCGCTAGAAATCACAGCTCAATGCA < 41bp 0.521335171682262 0.878632047832275 0.28003854 0.3568011 prediction 0.714593752300026 Functional Gain - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52447947 chr19:52447948 stopgain 0.270 0 22 hPsi_associated_SNPs_20829 0 0 0 0 0 nucleus 0.438720544261951 0.435202566715002 0 0 hPsi_site_14553 iPseU_CNN:0;iRNA_PseU:0 14554 chr1 34663240 34663240 1 + G A SKCM 34663239 + 34663219 34663259 41 GCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCA GCTTCTGTCCCAGTTCCCACTAAAGTCCACTGAGACATCCA < 41bp 0.477790051291567 0.857232713712912 0.31878245 0.39670828 prediction 0.714465427425823 Functional Gain - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34663239 chr1:34663240 synonymous SNV . 0 22 hPsi_associated_SNPs_20830 0 0 0 0 0 unknown 0.43859065648925 0.438718397022137 0 0 hPsi_site_14554 iPseU_CNN:0;iRNA_PseU:0 14555 chr5 179976992 179976992 1 + G A HNSC 179976991 + 179976971 179977011 41 TCACCTGACAGCTTTGCATTTGAGTGACAATTCCCTGTCCC TCACCTGACAGCTTTGCATTTAAGTGACAATTCCCTGTCCC < 41bp 0.478895620332878 0.857230781275692 0.3489077 0.8134768 prediction 0.714461562551385 Functional Gain - CNOT6 ENSG00000113300 CDS Human protein_coding chr5:179976991 chr5:179976992 synonymous SNV . 0 22 hPsi_associated_SNPs_20831 0 0 1 0 1 chromatin 0.438719417683808 0.438718593252761 0.6269536 0 hPsi_site_14555 iPseU_CNN:0.6269536;iRNA_PseU:0 14556 chr22 18846141 18846141 1 + G A PRAD 18846140 + 18846120 18846160 41 GCGCACGATGTAGGGCACCTTGGACCTCTCTCTCCTGCGGG GCGCACGATGTAGGGCACCTTAGACCTCTCTCTCCTGCGGG < 41bp 0.496278327094444 0.85723055772306 0.2717753 0.3222231 prediction 0.714461115446121 Functional Gain - LOC102725072 ENSG00000215544 ncRNA_exonic Human unprocessed_pseudogene chr22:18846140 chr22:18846141 . . 0 22 hPsi_associated_SNPs_20832 0 0 0 0 0 unknown 0.438718594743577 0.438718593303629 0 0 hPsi_site_14556 iPseU_CNN:0;iRNA_PseU:0 14557 chr15 91433133 91433133 1 + G A STAD 91433132 + 91433112 91433152 41 GGTGTTCAGGCGGCAGGAGATGGTTACGCAGCTGCAACAGG GGTGTTCAGGCGGCAGGAGATAGTTACGCAGCTGCAACAGG < 41bp 0.530241928891189 0.887468631791883 0.36701366 0.40647995 prediction 0.714453405801388 Functional Gain - FES ENSG00000182511 CDS Human protein_coding chr15:91433132 chr15:91433133 nonsynonymous SNV 0.827 0 22 hPsi_associated_SNPs_20833 0 0 0 0 2 cytosol 0.438718045889737 0.438719658021468 0 0 hPsi_site_14557 iPseU_CNN:0;iRNA_PseU:0 14558 chr16 1308192 1308192 1 + G A LGG 1308191 + 1308171 1308211 41 TCGTCCGCGATGACATGCTGTGTGCGGGGAGCGAAAATCAC TCGTCCGCGATGACATGCTGTATGCGGGGAGCGAAAATCAC < 41bp 0.472122872730167 0.857224967086576 0.17269424 0.22398672 prediction 0.714449934173153 Functional Gain - TPSD1 ENSG00000095917 CDS Human protein_coding chr16:1308191 chr16:1308192 nonsynonymous SNV 0.470 5 22 hPsi_associated_SNPs_20834 0 0 0 0 0 unknown 0.43918048849957 0.439137890779579 0 0 hPsi_site_14558 iPseU_CNN:0;iRNA_PseU:0 14559 chr22 42191478 42191478 1 + G A LUAD 42191477 + 42191457 42191497 41 GTGGGTGATGTTCTGCAAGGTGTGGCTTTGGCTGACCTGTC GTGGGTGATGTTCTGCAAGGTATGGCTTTGGCTGACCTGTC < 41bp 0.479473887258343 0.857222900552075 0.26053536 0.54883695 prediction 0.714445801104151 Functional Gain - MEI1 ENSG00000167077 CDS Human protein_coding chr22:42191477 chr22:42191478 nonsynonymous SNV 0.088 1 22 hPsi_associated_SNPs_20835 0 0 0 0 2 exosome 0.438718618774437 0.438718594793847 0.0976739 0 hPsi_site_14559 iPseU_CNN:0.0976739;iRNA_PseU:0 14560 chr4 6925573 6925573 1 + G A HNSC 6925572 + 6925552 6925592 41 AAAGCCCTGACCCGCAGCGATGATGTCTCCGTCTGCAGCGT AAAGCCCTGACCCGCAGCGATAATGTCTCCGTCTGCAGCGT < 41bp 0.465145239985685 0.857214424423252 0.24962103 0.24448895 prediction 0.714428848846504 Functional Gain - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925572 chr4:6925573 nonsynonymous SNV 0.145 0 22 hPsi_associated_SNPs_20836 0 0 1 0 0 Cytosol 0.438710680487532 0.438705179698576 0 0 hPsi_site_14560 iPseU_CNN:0;iRNA_PseU:0 14561 chr10 102242435 102242435 1 + G A rs368803739 102242434 + 102242414 102242454 41 GGAGCGCCGGGCCGAGACCGTGTCCAGCTGCAACTGCAAGT GGAGCGCCGGGCCGAGACCGTATCCAGCTGCAACTGCAAGT < 41bp 0.475590003124218 0.857210684644091 0.42739785 0.77669483 prediction 0.714421369288181 Functional Gain - WNT8B ENSG00000075290 CDS Human protein_coding chr10:102242434 chr10:102242435 synonymous SNV . 0 22 hPsi_associated_SNPs_20837 0 0 0 0 0 exosome 0.438708649111187 0.438719163170274 0.55338966 0 hPsi_site_14561 iPseU_CNN:0.55338966;iRNA_PseU:0 14562 chr19 50385373 50385373 1 + G A rs35008717 50385372 + 50385352 50385392 41 CTCCAACTCCTTCCACCACCTGCAGCTCTTTGACCAGGACA CTCCAACTCCTTCCACCACCTACAGCTCTTTGACCAGGACA < 41bp 0.469119571664931 0.857188821197702 0.13763398 0.2349028 prediction 0.714377642395405 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385372 chr19:50385373 synonymous SNV . 0 22 hPsi_associated_SNPs_20838 0 0 1 0 2 membrane 0.438718592995102 0.438718592995533 0 0 hPsi_site_14562 iPseU_CNN:0;iRNA_PseU:0 14563 chr6 33374012 33374012 1 + G A UCEC 33374011 + 33373991 33374031 41 CTGGCCCGCCAGAATCGGGCTGTGGCCCGCACAGCCCAGAA CTGGCCCGCCAGAATCGGGCTATGGCCCGCACAGCCCAGAA < 41bp 0.533360377659861 0.890534930537496 0.2951421 0.63112617 prediction 0.71434910575527 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33374011 chr6:33374012 nonsynonymous SNV 0.075 4 22 hPsi_associated_SNPs_20839 0 0 1 0 1 Cytosol 0.438718592996242 0.438718621852415 0.26225234 0 hPsi_site_14563 iPseU_CNN:0.26225234;iRNA_PseU:0 14564 chr17 61908904 61908904 1 + G A BLCA 61908903 + 61908883 61908923 41 GAAGATTCATTCTCGGAAGATGAACCTGACCCGGGGGATCA GAAGATTCATTCTCGGAAGATAAACCTGACCCGGGGGATCA < 41bp 0.528983981993226 0.886151802810732 0.3437114 0.6493639 prediction 0.714335641635013 Functional Gain - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908903 chr17:61908904 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20840 0 0 1 0 2 Ribosome 0.438720188830117 0.438718592874514 0.2987278 0 hPsi_site_14564 iPseU_CNN:0.2987278;iRNA_PseU:0 14565 chr11 5602226 5602226 1 + G A SKCM 5602225 + 5602205 5602245 41 CCTCACTGGCATCCCTGGGCTGGAGCAACTACATATCTGGC CCTCACTGGCATCCCTGGGCTAGAGCAACTACATATCTGGC < 41bp 0.492452895005305 0.857162234219307 0.19066569 0.29966515 prediction 0.714324468438615 Functional Gain - OR52B6 ENSG00000187747 CDS Human protein_coding chr11:5602225 chr11:5602226 synonymous SNV . 0 22 hPsi_associated_SNPs_20841 0 0 0 0 0 unknown 0.438718294065133 0.438729313436853 0 0 hPsi_site_14565 iPseU_CNN:0;iRNA_PseU:0 14566 chr20 23345110 23345110 1 + G A rs150491728 23345109 + 23345089 23345129 41 GCTTCGCCTCCTGGGTCACCTGTGTGACGTGACAGTCAGCG GCTTCGCCTCCTGGGTCACCTATGTGACGTGACAGTCAGCG < 41bp 0.517556760186909 0.87470790327699 0.34043232 0.37074527 prediction 0.714302286180162 Functional Gain - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23345109 chr20:23345110 synonymous SNV . 0 22 hPsi_associated_SNPs_20842 0 0 1 0 0 Cytosol 0.439065761353521 0.443866995766518 0 0 hPsi_site_14566 iPseU_CNN:0;iRNA_PseU:0 14567 chr8 145533233 145533233 1 + G A SKCM 145533232 + 145533212 145533252 41 CAGCACCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA CAGCACCCATGCTTCCTGCGTAGCCAGGAGCAGCTCCTTGA < 41bp 0.47339933533039 0.857150707782455 0.15055472 0.65411884 prediction 0.714301415564909 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145533232 chr8:145533233 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_20843 0 0 1 0 1 chromatin 0.438718593151693 0.438718500522091 0.30823768 0 hPsi_site_14567 iPseU_CNN:0.30823768;iRNA_PseU:0 14568 chr14 90450869 90450869 1 + G A HNSC 90450868 + 90450848 90450888 41 TTTTAATTCCAGAATATGGTTGAGCCCCTTATACCCACGAA TTTTAATTCCAGAATATGGTTAAGCCCCTTATACCCACGAA < 41bp 0.483503867923738 0.857146385926252 0.28710395 0.6053974 prediction 0.714292771852505 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90450868 chr14:90450869 synonymous SNV . 0 22 hPsi_associated_SNPs_20844 0 0 0 0 1 chromatin 0.438718594658388 0.438719019003964 0.2107948 0 hPsi_site_14568 iPseU_CNN:0.2107948;iRNA_PseU:0 14569 chr19 3179208 3179208 1 + G A UCEC 3179207 + 3179187 3179227 41 ACCTTCAGCCTGCTCTTCACTGCAGGGGAGCGCTTTGCCAC ACCTTCAGCCTGCTCTTCACTACAGGGGAGCGCTTTGCCAC < 41bp 0.498134714813563 0.857127514283416 0.23372054 0.33792862 prediction 0.714255028566832 Functional Gain - S1PR4 ENSG00000125910 CDS Human protein_coding chr19:3179207 chr19:3179208 nonsynonymous SNV 0.275 4 22 hPsi_associated_SNPs_20845 0 0 0 0 0 exosome 0.438705226202772 0.438695958727744 0 0 hPsi_site_14569 iPseU_CNN:0;iRNA_PseU:0 Glomerular filtration rate (creatinine) 14570 chr3 48266157 48266157 1 + G A rs377734000 48266156 + 48266136 48266176 41 GGGGCTCCTTTGACATCAGTTGTGATAAGGTGAGTGGGCTG GGGGCTCCTTTGACATCAGTTATGATAAGGTGAGTGGGCTG < 41bp 0.48321770991574 0.85712388748093 0.26977932 0.3384483 prediction 0.714247774961861 Functional Gain - CAMP ENSG00000164047 CDS Human protein_coding chr3:48266156 chr3:48266157 nonsynonymous SNV 0.621 3 22 hPsi_associated_SNPs_20846 0 0 0 0 2 exosome 0.438719429383938 0.438720137814749 0 0 hPsi_site_14570 iPseU_CNN:0;iRNA_PseU:0 14571 chr2 73478542 73478542 1 + G A ESCA 73478541 + 73478521 73478561 41 CACAAACATTCTCAACAAGCTGCGGGCTCGGCATGCCCAGG CACAAACATTCTCAACAAGCTACGGGCTCGGCATGCCCAGG < 41bp 0.465102543180671 0.857120103864973 0.24794999 0.89034295 prediction 0.714240207729946 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73478541 chr2:73478542 synonymous SNV . 0 22 hPsi_associated_SNPs_20847 0 0 1 0 1 Cytosol 0.438718592997057 0.438718603117928 0.7806859 0 hPsi_site_14571 iPseU_CNN:0.7806859;iRNA_PseU:0 14572 chr22 50633358 50633358 1 + G A rs78610463 50633357 + 50633337 50633377 41 GGAGGTGCAGCCTGACGTGGTGGTCGTGGAGCTCTGCCAAT GGAGGTGCAGCCTGACGTGGTAGTCGTGGAGCTCTGCCAAT < 41bp 0.528555141305077 0.885674582688111 0.27691358 0.72189665 prediction 0.714238882766069 Functional Gain - TRABD ENSG00000170638 CDS Human protein_coding chr22:50633357 chr22:50633358 synonymous SNV . 0 22 hPsi_associated_SNPs_20848 0 0 1 0 1 Ribosome 0.438717498072744 0.438705958466274 0.4437933 0 hPsi_site_14572 iPseU_CNN:0.4437933;iRNA_PseU:0 14573 chr11 4608321 4608321 1 + G A UCEC 4608320 + 4608300 4608340 41 TGAGCCCATGTATTGCTTTCTGTGTGTTCTGGCTGCTGTGG TGAGCCCATGTATTGCTTTCTATGTGTTCTGGCTGCTGTGG < 41bp 0.509931709569422 0.867049749812373 0.28726846 0.36601585 prediction 0.714236080485901 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608320 chr11:4608321 synonymous SNV . 0 22 hPsi_associated_SNPs_20849 0 0 0 0 0 unknown 0.437271903298834 0.438070178327481 0 0 hPsi_site_14573 iPseU_CNN:0;iRNA_PseU:0 14574 chr19 39216385 39216385 1 + G A OV 39216384 + 39216364 39216404 41 GAGATCGGGCGCATCTCCATTGAGATGAACGGGACCCTGGA GAGATCGGGCGCATCTCCATTAAGATGAACGGGACCCTGGA < 41bp 0.455094981705145 0.857113288367087 0.33921164 0.5870745 prediction 0.714226576734175 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39216384 chr19:39216385 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_20850 0 0 1 0 1 Nucleus 0.438718594362347 0.438718793350425 0.174149 0 hPsi_site_14574 iPseU_CNN:0.174149;iRNA_PseU:0 14575 chr6 130381261 130381261 1 + G A rs7767284 130381260 + 130381240 130381280 41 GGATCCTGAGCATCAGTCTGTGTACTGTGTCCTCACCGTCG GGATCCTGAGCATCAGTCTGTATACTGTGTCCTCACCGTCG < 41bp 0.530000934644122 0.887112824082691 0.39312235 0.5840015 prediction 0.71422377887714 Functional Gain - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381260 chr6:130381261 synonymous SNV . 0 22 hPsi_associated_SNPs_20851 0 0 0 0 2 nucleoplasm 0.438194078068678 0.438620978150675 0.168003 0 hPsi_site_14575 iPseU_CNN:0.168003;iRNA_PseU:0 14576 chr1 228005003 228005003 1 + G A SKCM 228005002 + 228004982 228005022 41 GTGGTATGAGGTGAACAGGGTGATCCTGCACCCCACATATG GTGGTATGAGGTGAACAGGGTAATCCTGCACCCCACATATG < 41bp 0.460044439000073 0.857103037507197 0.6583599 0.94087386 prediction 0.714206075014394 Functional Gain - PRSS38 ENSG00000185888 CDS Human protein_coding chr1:228005002 chr1:228005003 synonymous SNV . 0 22 hPsi_associated_SNPs_20852 0 0 0 0 1 unknown 0.438718592988194 0.438718593531992 0.56502792 0 hPsi_site_14576 iPseU_CNN:0.56502792;iRNA_PseU:0 14577 chr16 2510938 2510938 1 + G A BRCA 2510937 + 2510917 2510957 41 GAGAGACAAGGCCCCCAGCCTGAAATCTAGGTCCATTGTCA GAGAGACAAGGCCCCCAGCCTAAAATCTAGGTCCATTGTCA < 41bp 0.497482461463253 0.857100087019685 0.2137655 0.36959466 prediction 0.714200174039369 Functional Gain - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2510937 chr16:2510938 synonymous SNV . 0 22 hPsi_associated_SNPs_20853 0 0 0 0 0 Ribosome 0.43871860834034 0.438718592995039 0 0 hPsi_site_14577 iPseU_CNN:0;iRNA_PseU:0 14578 chr2 220111569 220111569 1 + G A CESC 220111568 + 220111548 220111588 41 AGGGAACGGGGTGCTAAGCATGAGGCCTGGCTGCTGCTACC AGGGAACGGGGTGCTAAGCATAAGGCCTGGCTGCTGCTACC < 41bp 0.524108153397255 0.881196500609174 0.22972763 0.32489628 prediction 0.714176694423837 Functional Gain - STK16 ENSG00000115661 CDS Human protein_coding chr2:220111568 chr2:220111569 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20854 0 0 1 0 1 Ribosome 0.438718593029258 0.438718592995102 0 0 hPsi_site_14578 iPseU_CNN:0;iRNA_PseU:0 14579 chr16 30778079 30778079 1 + G A STAD 30778078 + 30778058 30778098 41 ACAGAGCGACGAGCTGGGGCTGCAGAAGAAGCTACGCACAG ACAGAGCGACGAGCTGGGGCTACAGAAGAAGCTACGCACAG < 41bp 0.463635080507571 0.857079037688034 0.28353906 0.367099 prediction 0.714158075376067 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30778078 chr16:30778079 synonymous SNV . 0 22 hPsi_associated_SNPs_20855 0 0 1 0 1 Ribosome 0.438765633993652 0.438750520154522 0 0 hPsi_site_14579 iPseU_CNN:0;iRNA_PseU:0 14580 chr20 2413220 2413220 1 + G A rs149369357 2413219 + 2413199 2413239 41 TGGCCCAAGGCAGCTGCAGGTGGACCTTGTAAGCCCTCACT TGGCCCAAGGCAGCTGCAGGTAGACCTTGTAAGCCCTCACT < 41bp 0.472351984977002 0.857073913857133 0.27501163 0.64064264 prediction 0.714147827714266 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2413219 chr20:2413220 synonymous SNV . 0 22 hPsi_associated_SNPs_20856 0 0 0 0 0 exosome 0.438718586449374 0.438718593018517 0.28128528 0 hPsi_site_14580 iPseU_CNN:0.28128528;iRNA_PseU:0 14581 chr19 2425982 2425982 1 + G A SKCM 2425981 + 2425961 2426001 41 TCTGGACGGTGGGTGCTAACTGGGGTCACTAGCTGGGGCTA TCTGGACGGTGGGTGCTAACTAGGGTCACTAGCTGGGGCTA < 41bp 0.489973234142378 0.85704924492234 0.26920268 0.6340374 prediction 0.71409848984468 Functional Gain - TMPRSS9 ENSG00000178297 CDS Human protein_coding chr19:2425981 chr19:2425982 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20857 0 0 0 0 0 chromatin 0.441452771478566 0.438718672730645 0.2680748 0 hPsi_site_14581 iPseU_CNN:0.2680748;iRNA_PseU:0 14582 chr10 102743424 102743424 1 + G A rs149914326 102743423 + 102743403 102743443 41 GTGCTAGCCATTGCCGCGCTTGGTGGCCTCTGCCTCATCCT GTGCTAGCCATTGCCGCGCTTAGTGGCCTCTGCCTCATCCT < 41bp 0.528213286337652 0.885258947622915 0.30689973 0.7372227 prediction 0.714091322570527 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102743423 chr10:102743424 nonsynonymous SNV 0.981 3 22 hPsi_associated_SNPs_20858 0 0 1 0 0 nucleoplasm 0.438670520661093 0.439291788937165 0.4744454 0 hPsi_site_14582 iPseU_CNN:0.4744454;iRNA_PseU:0 14583 chr1 171763553 171763553 1 + G A STAD 171763552 + 171763532 171763572 41 CCAGCACGGCCTTGCTACGATGTCATAATGTTTGATGTTGA CCAGCACGGCCTTGCTACGATATCATAATGTTTGATGTTGA < 41bp 0.521137729636003 0.878181155860035 0.16764897 0.18480745 prediction 0.714086852448063 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763552 chr1:171763553 nonsynonymous SNV 0.707 2 22 hPsi_associated_SNPs_20859 0 0 0 0 1 Ribosome 0.43883766407818 0.438719182603505 0 0 hPsi_site_14583 iPseU_CNN:0;iRNA_PseU:0 14584 chrX 57619015 57619015 1 + G A ACC 57619014 + 57618994 57619034 41 CCACAACCAGGACCTGCTGTTGCGCTTTGAGAACGGCGTCC CCACAACCAGGACCTGCTGTTACGCTTTGAGAACGGCGTCC < 41bp 0.485741428345594 0.857036141540016 0.30503774 0.7370418 prediction 0.714072283080033 Functional Gain - ZXDB ENSG00000198455 CDS Human protein_coding chrX:57619014 chrX:57619015 synonymous SNV . 0 22 hPsi_associated_SNPs_20860 0 0 0 0 0 Cytosol 0.438718592753364 0.438718730714827 0.4740836 0 hPsi_site_14584 iPseU_CNN:0.4740836;iRNA_PseU:0 14585 chr7 56147316 56147316 1 + G A SARC 56147315 + 56147295 56147335 41 GGGAGCTGTAAGCAGCCGGGTGGTGACAAGGAGAAAAGCCT GGGAGCTGTAAGCAGCCGGGTAGTGACAAGGAGAAAAGCCT < 41bp 0.487255974009992 0.857034473399578 0.15443507 0.28149626 prediction 0.714068946799155 Functional Gain - SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56147315 chr7:56147316 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_20861 0 0 1 0 1 Ribosome 0.438718602441258 0.438718493977895 0 0 hPsi_site_14585 iPseU_CNN:0;iRNA_PseU:0 14586 chr17 33454101 33454101 1 + G A LUAD 33454100 + 33454080 33454120 41 GATTCAGACTGCAGCTCTGATGAGACCAGCATCTCTGCCTT GATTCAGACTGCAGCTCTGATAAGACCAGCATCTCTGCCTT < 41bp 0.465938736651432 0.857028894769531 0.25131541 0.27613723 prediction 0.714057789539062 Functional Gain - FNDC8 ENSG00000073598 CDS Human protein_coding chr17:33454100 chr17:33454101 nonsynonymous SNV 0.460 1 22 hPsi_associated_SNPs_20862 0 0 0 0 1 exosome 0.438717118644096 0.438717455579256 0 0 hPsi_site_14586 iPseU_CNN:0;iRNA_PseU:0 14587 chr4 651250 651250 1 + G A SKCM 651249 + 651229 651269 41 GGACATGGTCCTTTACCACGTGAAGTGCGACAGGGACGAGA GGACATGGTCCTTTACCACGTAAAGTGCGACAGGGACGAGA < 41bp 0.456336863011222 0.857020277801109 0.31340182 0.67423683 prediction 0.714040555602219 Functional Gain - PDE6B ENSG00000133256 CDS Human protein_coding chr4:651249 chr4:651250 synonymous SNV . 0 22 hPsi_associated_SNPs_20863 0 0 0 0 1 Nucleus 0.438569540081276 0.438718408848963 0.34847366 0 hPsi_site_14587 iPseU_CNN:0.34847366;iRNA_PseU:0 14588 chr9 125282057 125282057 1 + G A STAD 125282056 + 125282036 125282076 41 TCATTACTCTACCACTAATATGCATCTTGATCTCTTATGGC TCATTACTCTACCACTAATATACATCTTGATCTCTTATGGC < 41bp 0.495195229743423 0.857017379901375 0.23120543 0.33389077 prediction 0.71403475980275 Functional Gain - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125282056 chr9:125282057 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_20864 0 0 0 0 0 exosome 0.438718293852932 0.438661185042562 0 0 hPsi_site_14588 iPseU_CNN:0;iRNA_PseU:0 14589 chr7 99084582 99084582 1 + G A STAD 99084581 + 99084561 99084601 41 CTCTTACGGTCCATAAACAGTGTCACCTGCAAAACAAGCCA CTCTTACGGTCCATAAACAGTATCACCTGCAAAACAAGCCA < 41bp 0.473770626993543 0.857013585526137 0.2843741 0.46744615 prediction 0.714027171052274 Functional Gain - ZNF394;ZNF789 ENSG00000198556 CDS Human protein_coding chr7:99084581 chr7:99084582 nonsynonymous SNV 0.972 1 22 hPsi_associated_SNPs_20865 0 0 0 0 0 unknown 0.438723919850664 0.43871967595381 0 0 hPsi_site_14589 iPseU_CNN:0;iRNA_PseU:0 14590 chr13 115030677 115030677 1 + G A UCEC 115030676 + 115030656 115030696 41 CTGTTACAATGCTTGGTCATTGCATCGAAATGTACATTGGT CTGTTACAATGCTTGGTCATTACATCGAAATGTACATTGGT < 41bp 0.512785574261832 0.869799091267875 0.31111377 0.34282902 prediction 0.714027034012085 Functional Gain - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115030676 chr13:115030677 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20866 0 0 1 0 2 Ribosome 0.439786021873888 0.447925027046084 0 0 hPsi_site_14590 iPseU_CNN:0;iRNA_PseU:0 14591 chr14 74711961 74711961 1 + G A SKCM 74711960 + 74711940 74711980 41 TGCCCGGGAGATGCTGGCCATGAAAACGGAGCTGCCGGAAG TGCCCGGGAGATGCTGGCCATAAAAACGGAGCTGCCGGAAG < 41bp 0.460531347800919 0.857006645051125 0.15269059 0.18045405 prediction 0.71401329010225 Functional Gain - VSX2 ENSG00000119614 CDS Human protein_coding chr14:74711960 chr14:74711961 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20867 0 0 0 0 2 exosome 0.438719167321228 0.438717132918975 0 0 hPsi_site_14591 iPseU_CNN:0;iRNA_PseU:0 14592 chr3 196388312 196388312 1 + G A KIRC 196388311 + 196388291 196388331 41 CAGAATCCATATGACTGCTGTGGGGTGGATGGCTGGGGGGC CAGAATCCATATGACTGCTGTAGGGTGGATGGCTGGGGGGC < 41bp 0.521512375657113 0.878517284315838 0.24704015 0.3661096 prediction 0.71400981731745 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196388311 chr3:196388312 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_20868 0 0 1 0 0 chromatin 0.438718592302736 0.435847191683374 0 0 hPsi_site_14592 iPseU_CNN:0;iRNA_PseU:0 14593 chrX 49099890 49099890 1 + G A BLCA 49099889 + 49099869 49099909 41 GGCCGGGACCGGCCAGGGGATGAGGACTGGGTCCACCGGAC GGCCGGGACCGGCCAGGGGATAAGGACTGGGTCCACCGGAC < 41bp 0.463800359032773 0.856998113512901 0.2786069 0.6208897 prediction 0.713996227025802 Functional Gain - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49099889 chrX:49099890 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_20869 0 0 0 0 1 Cytosol 0.438623222767353 0.438718563878173 0.2417794 0 hPsi_site_14593 iPseU_CNN:0.2417794;iRNA_PseU:0 14594 chr9 36116984 36116984 1 + G A UCEC 36116983 + 36116963 36117003 41 CTGCATTCGTCTTTTTCAGGTGCATACCCAAACCACAGGTC CTGCATTCGTCTTTTTCAGGTACATACCCAAACCACAGGTC < 41bp 0.502168864180478 0.859164613063625 0.28094745 0.539239 prediction 0.713991497766294 Functional Gain - RECK ENSG00000122707 CDS Human protein_coding chr9:36116983 chr9:36116984 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_20870 0 0 0 0 1 exosome 0.438718587691639 0.438718086665007 0.078478 0 hPsi_site_14594 iPseU_CNN:0.078478;iRNA_PseU:0 14595 chr19 49843516 49843516 1 + C T UCEC 49843517 - 49843497 49843537 41 CAGGAATATCGAGAGCGTCATGAACCCGAGCTATAGAGAAA CAGGAATATCGAGAGCGTCATAAACCCGAGCTATAGAGAAA < 41bp 0.509688085710188 0.866682171085021 0.21529815 0.37736467 prediction 0.713988170749667 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49843517 chr19:49843516 synonymous SNV . 0 22 hPsi_associated_SNPs_20871 0 0 1 0 1 Endoplasmic reticulum 0.438808898177628 0.438718516500568 0 0 hPsi_site_14595 iPseU_CNN:0;iRNA_PseU:0 14596 chr22 39479814 39479814 1 + G A COAD 39479813 + 39479793 39479833 41 AGGACGGCATGAGACTTACCTGTGTTATGAGGTGGAGCGCA AGGACGGCATGAGACTTACCTATGTTATGAGGTGGAGCGCA < 41bp 0.469680539320283 0.856982290924216 0.3822234 0.38382593 prediction 0.713964581848431 Functional Gain - APOBEC3G ENSG00000239713 CDS Human protein_coding chr22:39479813 chr22:39479814 synonymous SNV . 0 22 hPsi_associated_SNPs_20872 0 0 0 0 2 Cytosol 0.438719546723106 0.438718738583111 0 0 hPsi_site_14596 iPseU_CNN:0;iRNA_PseU:0 14597 chr15 59911631 59911631 1 + G A SKCM 59911630 + 59911610 59911650 41 CGTTTATGGGGCTGGGGACTTGAATTGGATGCTTCAAAACC CGTTTATGGGGCTGGGGACTTAAATTGGATGCTTCAAAACC < 41bp 0.479522803054798 0.856975665685225 0.38694763 0.5025209 prediction 0.71395133137045 Functional Gain - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911630 chr15:59911631 synonymous SNV . 0 22 hPsi_associated_SNPs_20873 0 0 1 0 0 exosome 0.438718568300625 0.438718531645212 0.0050418000000001 0 hPsi_site_14597 iPseU_CNN:0.0050418000000001;iRNA_PseU:0 14598 chr9 113538208 113538208 1 + G A BLCA 113538207 + 113538187 113538227 41 GCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCC GCAAGCTTCCCAGCATGCATTAGGACCCCACGGCCTGTGCC < 41bp 0.528410075230725 0.885379876042712 0.47561818 0.6966604 prediction 0.713939601623975 Functional Gain - MUSK ENSG00000030304 CDS Human protein_coding chr9:113538207 chr9:113538208 stopgain 0.979 0 22 hPsi_associated_SNPs_20874 0 0 0 0 1 exosome 0.438718589325067 0.438646972532206 0.3933208 0 hPsi_site_14598 iPseU_CNN:0.3933208;iRNA_PseU:0 14599 chr6 27100971 27100971 1 + G A UCEC 27100970 + 27100950 27100990 41 CTGCTCCGCAAAGGCAACTATGCCGAGCGGGTCGGGGCCGG CTGCTCCGCAAAGGCAACTATACCGAGCGGGTCGGGGCCGG < 41bp 0.505177875186724 0.862147517780141 0.36005074 0.4912423 prediction 0.713939285186834 Functional Gain - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100970 chr6:27100971 nonsynonymous SNV 0.455 3 22 hPsi_associated_SNPs_20875 0 0 1 0 0 Ribosome 0.43871859507441 0.438718592285424 0 0 hPsi_site_14599 iPseU_CNN:0;iRNA_PseU:0 14600 chr19 49842824 49842824 1 + G A rs164820 49842823 + 49842803 49842843 41 CTCCACCCAGCACCGGAGGGTGGGGGCGGCCCAGCTTCAGG CTCCACCCAGCACCGGAGGGTAGGGGCGGCCCAGCTTCAGG < 41bp 0.488197853537839 0.856961550145498 0.2225388 0.6518353 prediction 0.713923100290995 Functional Gain - CD37 ENSG00000197813 ncRNA_intronic Human lincRNA chr19:49842823 chr19:49842824 . . 0 22 hPsi_associated_SNPs_20876 0 0 0 0 0 Endoplasmic reticulum 0.438718608061812 0.438718593005912 0.3036706 0 hPsi_site_14600 iPseU_CNN:0.3036706;iRNA_PseU:0 14601 chr2 10350599 10350599 1 + G A rs7423163 10350598 + 10350578 10350618 41 TCAGAATGAAGTTATCTGGGTGGGAACTCACCAAGAATGCA TCAGAATGAAGTTATCTGGGTAGGAACTCACCAAGAATGCA < 41bp 0.51099691181905 0.867944097169886 0.33334103 0.7205725 prediction 0.71389437070167 Functional Gain - C2orf48 ENSG00000163009 CDS Human lincRNA chr2:10350598 chr2:10350599 stopgain . 0 22 hPsi_associated_SNPs_20877 0 0 1 0 0 unknown 0.438718592519169 0.438720098139553 0.441145 0 hPsi_site_14601 iPseU_CNN:0.441145;iRNA_PseU:0 14602 chr4 56233783 56233783 1 + G A rs371637881 56233782 + 56233762 56233802 41 AACAGGGAAAAATCTATTGATGCAAGCACGGTGGTTCCATA AACAGGGAAAAATCTATTGATACAAGCACGGTGGTTCCATA < 41bp 0.480187491421384 0.85694604962161 0.14973077 0.3324532 prediction 0.71389209924322 Functional Gain - SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56233782 chr4:56233783 nonsynonymous SNV 0.318 0 22 hPsi_associated_SNPs_20878 0 0 0 0 1 Ribosome 0.438718591280192 0.438718592998445 0 0 hPsi_site_14602 iPseU_CNN:0;iRNA_PseU:0 14603 chr5 43644392 43644392 1 + G A CESC 43644391 + 43644371 43644411 41 GCTGAGGCTGGTGGAAACTTTGAAACCACTAAGCCAGGAGA GCTGAGGCTGGTGGAAACTTTAAAACCACTAAGCCAGGAGA < 41bp 0.473219500021929 0.856935818991864 0.3520984 0.5089427 prediction 0.713871637983728 Functional Gain - NNT ENSG00000112992 CDS Human protein_coding chr5:43644391 chr5:43644392 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20879 0 0 1 0 2 Endoplasmic reticulum 0.438718638275702 0.438730160439214 0.0178853999999999 0 hPsi_site_14603 iPseU_CNN:0.0178853999999999;iRNA_PseU:0 14604 chr15 45803358 45803358 1 + G A LUAD 45803357 + 45803337 45803377 41 TAAGCGATGAAATCCAAAGGTGAATCTTTTGGTTGGTGATT TAAGCGATGAAATCCAAAGGTAAATCTTTTGGTTGGTGATT < 41bp 0.499442388646169 0.856932590365819 0.28605762 0.5388732 prediction 0.713865180731639 Functional Gain - SLC30A4 ENSG00000104154 CDS Human protein_coding chr15:45803357 chr15:45803358 synonymous SNV . 0 22 hPsi_associated_SNPs_20880 0 0 0 3 0 Nucleus 0.438718740465147 0.438835301942038 0.0777464000000001 0 hPsi_site_14604 iPseU_CNN:0.0777464000000001;iRNA_PseU:0 14605 chrX 128926612 128926612 1 + G A STAD 128926611 + 128926591 128926631 41 CTCCCCCAACAGAAAGGAGATGTGATCCAGATCATTGAAAA CTCCCCCAACAGAAAGGAGATATGATCCAGATCATTGAAAA < 41bp 0.529482224541987 0.886405964186962 0.32173625 0.5805063 prediction 0.71384747928995 Functional Gain - SASH3 ENSG00000122122 CDS Human protein_coding chrX:128926611 chrX:128926612 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20881 0 0 0 0 1 exosome 0.438718572450477 0.438718592716916 0.1610126 0 hPsi_site_14605 iPseU_CNN:0.1610126;iRNA_PseU:0 14606 chr2 219679800 219679800 1 + G A rs140059093 219679799 + 219679779 219679819 41 TGTCCTAGAGGCTCCAGCTCTGGCACAGTGGTTCCTGGCTG TGTCCTAGAGGCTCCAGCTCTAGCACAGTGGTTCCTGGCTG < 41bp 0.48817510542183 0.856919143822899 0.23901057 0.28036928 prediction 0.713838287645797 Functional Gain - CYP27A1 ENSG00000135929 UTR3 Human protein_coding chr2:219679799 chr2:219679800 . . 0 22 hPsi_associated_SNPs_20882 1 0 1 0 0 cytosol 0.439653613410243 0.438719469690408 0 0 hPsi_site_14606 iPseU_CNN:0;iRNA_PseU:0 14607 chr19 36243996 36243996 1 + G A UCEC 36243995 + 36243975 36244015 41 CCCACCTTCCCAGACACATATGTGATCAAGCTGTTCGACCG CCCACCTTCCCAGACACATATATGATCAAGCTGTTCGACCG < 41bp 0.465761827663717 0.856917612857414 0.32209957 0.32744333 prediction 0.713835225714829 Functional Gain - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36243995 chr19:36243996 nonsynonymous SNV 0.865 2 22 hPsi_associated_SNPs_20883 0 0 1 0 1 Cytosol 0.438721445185204 0.438726866421676 0 0 hPsi_site_14607 iPseU_CNN:0;iRNA_PseU:0 14608 chr10 104416539 104416539 1 + G A ESCA 104416538 + 104416518 104416558 41 CCGGTGCCCTTCCTGCAGAGTGTCCCCCTGTACCCTTGCGG CCGGTGCCCTTCCTGCAGAGTATCCCCCTGTACCCTTGCGG < 41bp 0.515512002250047 0.87242850352698 0.30419108 0.61947215 prediction 0.713833002553865 Functional Gain - TRIM8 ENSG00000171206 CDS Human protein_coding chr10:104416538 chr10:104416539 nonsynonymous SNV 0.966 0 22 hPsi_associated_SNPs_20884 0 0 1 0 1 Endoplasmic reticulum 0.438721423477491 0.438718644524088 0.2389443 0 hPsi_site_14608 iPseU_CNN:0.2389443;iRNA_PseU:0 14609 chr16 68293131 68293131 1 + G A COAD 68293130 + 68293110 68293150 41 TGTCTCCACCAGCTGGCTGCTGCCCTACAACTACACATGGT TGTCTCCACCAGCTGGCTGCTACCCTACAACTACACATGGT < 41bp 0.469824176277068 0.856915302593626 0.29329246 0.737339 prediction 0.713830605187251 Functional Gain - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68293130 chr16:68293131 nonsynonymous SNV 0.876 2 22 hPsi_associated_SNPs_20885 0 0 0 0 1 Ribosome 0.438718870465554 0.438718291588108 0.474678 0 hPsi_site_14609 iPseU_CNN:0.474678;iRNA_PseU:0 14610 chr10 45924114 45924114 1 + G A CESC 45924113 + 45924093 45924133 41 GAGCTGCTGGATGGCATCGATGCCAACAAAACAGACCCCTG GAGCTGCTGGATGGCATCGATACCAACAAAACAGACCCCTG < 41bp 0.463421769705673 0.856913723800068 0.5803664 0.8754996 prediction 0.713827447600136 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45924113 chr10:45924114 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20886 0 0 1 0 2 Cytosol 0.438705377102108 0.438718352639369 0.5902664 0 hPsi_site_14610 iPseU_CNN:0.5902664;iRNA_PseU:0 14611 chr17 61869830 61869830 1 + G A BLCA 61869829 + 61869809 61869849 41 GATTTACCTTACATTCCTGCTGAAAACTCACCAACTCGCCA GATTTACCTTACATTCCTGCTAAAAACTCACCAACTCGCCA < 41bp 0.493944446024776 0.856906462385163 0.16837904 0.27131146 prediction 0.713812924770326 Functional Gain - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61869829 chr17:61869830 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20887 0 0 1 0 0 chromatin 0.438650235106756 0.438718741296118 0 0 hPsi_site_14611 iPseU_CNN:0;iRNA_PseU:0 14612 chr17 17701153 17701153 1 + G A PRAD 17701152 + 17701132 17701172 41 CACAGGAAGCCTTCCTCCTCTGCCTCCTCTTCCTCATCCTC CACAGGAAGCCTTCCTCCTCTACCTCCTCTTCCTCATCCTC < 41bp 0.492147565296549 0.856904798976488 0.40394583 0.6626546 prediction 0.713809597952977 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17701152 chr17:17701153 nonsynonymous SNV 0.692 0 22 hPsi_associated_SNPs_20888 0 0 1 0 0 chromatin 0.438718594584133 0.438718584550154 0.3253092 0 hPsi_site_14612 iPseU_CNN:0.3253092;iRNA_PseU:0 14613 chr17 7611412 7611412 1 + G A UCEC 7611411 + 7611391 7611431 41 AAGCTGTACCTGGTAGGGGGTGCTCAGGGCCGGCGCTGTGA AAGCTGTACCTGGTAGGGGGTACTCAGGGCCGGCGCTGTGA < 41bp 0.457284750014419 0.856900265632648 0.2741542 0.75360906 prediction 0.713800531265296 Functional Gain - EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611411 chr17:7611412 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20889 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.50721812 0 hPsi_site_14613 iPseU_CNN:0.50721812;iRNA_PseU:0 14614 chr7 143747940 143747940 1 + G A SKCM 143747939 + 143747919 143747959 41 CAGTCCTGGCTGTCACTTCTTGGGCATGTGGTTCCCTTCTG CAGTCCTGGCTGTCACTTCTTAGGCATGTGGTTCCCTTCTG < 41bp 0.49116193053653 0.856888851558133 0.2218115 0.26554367 prediction 0.713777703116266 Functional Gain - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143747939 chr7:143747940 stopgain 0.860 0 22 hPsi_associated_SNPs_20890 0 0 0 0 0 unknown 0.438716228821471 0.438718606509429 0 0 hPsi_site_14614 iPseU_CNN:0;iRNA_PseU:0 14615 chr22 21363584 21363584 1 + G A BLCA 21363583 + 21363563 21363603 41 GTAGGGCTCCGTCATGGCCATGGAGACCTGGGGGGCTGGGC GTAGGGCTCCGTCATGGCCATAGAGACCTGGGGGGCTGGGC < 41bp 0.501452523886234 0.858335131648947 0.24567562 0.35016543 prediction 0.713765215525428 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363583 chr22:21363584 . . 0 22 hPsi_associated_SNPs_20891 0 0 0 0 0 unknown 0.438718593038508 0.438718592756417 0 0 hPsi_site_14615 iPseU_CNN:0;iRNA_PseU:0 14616 chr19 42847670 42847670 1 + G A UCEC 42847669 + 42847649 42847689 41 GGTCGGTACTCACATGTAGCTGCGGTGCTTGGTGGCAGCGT GGTCGGTACTCACATGTAGCTACGGTGCTTGGTGGCAGCGT < 41bp 0.513649677865664 0.870484940174676 0.3351298 0.48333785 prediction 0.713670524618025 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42847669 chr19:42847670 nonsynonymous SNV 0.966 4 22 hPsi_associated_SNPs_20892 0 0 0 0 1 Endoplasmic reticulum 0.438718581266178 0.438718592926262 0 0 hPsi_site_14616 iPseU_CNN:0;iRNA_PseU:0 14617 chr3 148459124 148459124 1 + G A COAD 148459123 + 148459103 148459143 41 GGCCCTTTGGCAATTACCTATGTAAGATTGCTTCAGCCAGC GGCCCTTTGGCAATTACCTATATAAGATTGCTTCAGCCAGC < 41bp 0.47735257747056 0.856834457344961 0.6859938 0.6806561 prediction 0.713668914689922 Functional Gain - AGTR1 ENSG00000144891 CDS Human protein_coding chr3:148459123 chr3:148459124 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_20893 0 0 0 0 0 Endoplasmic reticulum 0.438718592994809 0.438718592976351 0 0 hPsi_site_14617 iPseU_CNN:0;iRNA_PseU:0 14618 chr2 113414753 113414753 1 + G A BLCA 113414752 + 113414732 113414772 41 CCATCCTCATCTCGGTGGGATGTGCAGTTTTCTGTGCCCTT CCATCCTCATCTCGGTGGGATATGCAGTTTTCTGTGCCCTT < 41bp 0.527876555495998 0.884709317449722 0.31766933 0.28990483 prediction 0.713665523907447 Functional Gain - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113414752 chr2:113414753 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20894 0 0 1 0 2 Ribosome 0.438718592961914 0.438718592995409 0 0 hPsi_site_14618 iPseU_CNN:0;iRNA_PseU:0 14619 chr1 17596837 17596837 1 + G A UCEC 17596836 + 17596816 17596856 41 GCGCTTCTTCGTGGAAGGCCTGTCCTTCCCTGATGCCGGCT GCGCTTCTTCGTGGAAGGCCTATCCTTCCCTGATGCCGGCT < 41bp 0.463471924579423 0.856829192717541 0.40578985 0.62034804 prediction 0.713658385435081 Functional Gain - PADI3 ENSG00000142619 CDS Human protein_coding chr1:17596836 chr1:17596837 synonymous SNV . 0 22 hPsi_associated_SNPs_20895 0 0 0 0 1 unknown 0.438718593672064 0.438718593001448 0.24069608 0 hPsi_site_14619 iPseU_CNN:0.24069608;iRNA_PseU:0 14620 chr3 133478132 133478132 1 + G A UCEC 133478131 + 133478111 133478151 41 AGTGTAGGGAAAATAGAGTGTGTATCAGCAGAGACCACCGA AGTGTAGGGAAAATAGAGTGTATATCAGCAGAGACCACCGA < 41bp 0.464495441522867 0.856811735982598 0.2879414 0.70466495 prediction 0.713623471965197 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133478131 chr3:133478132 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_20896 0 0 1 0 1 Cytosol 0.438705214059098 0.438716975412885 0.4093299 0 hPsi_site_14620 iPseU_CNN:0.4093299;iRNA_PseU:0 14621 chr20 60747782 60747782 1 + G A rs36106901 60747781 + 60747761 60747801 41 CAGGCCGGGTACCAGCAGGGTGCCGCGCAGCAGCAGACGTA CAGGCCGGGTACCAGCAGGGTACCGCGCAGCAGCAGACGTA < 41bp 0.451043217746747 0.856801821238975 0.26334906 0.75825346 prediction 0.713603642477949 Functional Gain - SS18L1 ENSG00000184402 CDS Human protein_coding chr20:60747781 chr20:60747782 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_20897 0 0 1 0 2 chromatin 0.438718450714622 0.438718634788968 0.51650692 0 hPsi_site_14621 iPseU_CNN:0.51650692;iRNA_PseU:0 14622 chr16 70497656 70497656 1 + G A LUAD 70497655 + 70497635 70497675 41 GCTGGTGGCTGCTGAACACCTGAGTGCCCGGGCAGGCTTCA GCTGGTGGCTGCTGAACACCTAAGTGCCCGGGCAGGCTTCA < 41bp 0.519922459004629 0.876720613977566 0.23506424 0.37231955 prediction 0.713596309945873 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70497655 chr16:70497656 synonymous SNV . 0 22 hPsi_associated_SNPs_20898 0 0 1 0 1 chromatin 0.438718596278483 0.438718622161299 0 0 hPsi_site_14622 iPseU_CNN:0;iRNA_PseU:0 14623 chr9 37500851 37500851 1 + G A LGG 37500850 + 37500830 37500870 41 GTTGTAGGTGCTCTGGGACCTGGAGTTCCCCACATCATCAA GTTGTAGGTGCTCTGGGACCTAGAGTTCCCCACATCATCAA < 41bp 0.530347271634717 0.887141148230155 0.30013132 0.35552517 prediction 0.713587753190875 Functional Gain - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37500850 chr9:37500851 nonsynonymous SNV 0.482 3 22 hPsi_associated_SNPs_20899 0 0 1 0 2 Ribosome 0.438718156857081 0.438718596662648 0 0 hPsi_site_14623 iPseU_CNN:0;iRNA_PseU:0 14624 chr10 81272751 81272751 1 + G A BLCA 81272750 + 81272730 81272770 41 CCAGAGGACCTTCGTCTCCCTGAGGGAGACCTTGGCAAGGA CCAGAGGACCTTCGTCTCCCTAAGGGAGACCTTGGCAAGGA < 41bp 0.515886911082929 0.872673613692401 0.24538869 0.36700007 prediction 0.713573405218946 Functional Gain - EIF5AL1 ENSG00000253626 CDS Human protein_coding chr10:81272750 chr10:81272751 nonsynonymous SNV 0.329 1 22 hPsi_associated_SNPs_20900 0 0 0 0 0 Ribosome 0.438718602040474 0.43871859299558 0 0 hPsi_site_14624 iPseU_CNN:0;iRNA_PseU:0 14625 chr6 41029329 41029329 1 + G A rs142866037 41029328 + 41029308 41029348 41 TCCAGCCCCTGTGCAGCGTGTGCTGACCGCATTATCAAAAC TCCAGCCCCTGTGCAGCGTGTACTGACCGCATTATCAAAAC < 41bp 0.534428580036216 0.891210670445012 0.2949836 0.92941 prediction 0.713564180817592 Functional Gain - APOBEC2 ENSG00000124701 CDS Human protein_coding chr6:41029328 chr6:41029329 nonsynonymous SNV 0.506 4 22 hPsi_associated_SNPs_20901 0 0 0 0 1 chromatin 0.437773270535592 0.439863190667646 0.85882 0 hPsi_site_14625 iPseU_CNN:0.85882;iRNA_PseU:0 14626 chr10 118084526 118084526 1 + G A LUSC 118084525 + 118084505 118084545 41 GCAGGAGCCAGGCCCTGAGATGAGCTTGGAGTCCCTGTTTC GCAGGAGCCAGGCCCTGAGATAAGCTTGGAGTCCCTGTTTC < 41bp 0.510905614529359 0.867664416436166 0.3176202 0.48421994 prediction 0.713517603813614 Functional Gain - CCDC172 ENSG00000182645 CDS Human protein_coding chr10:118084525 chr10:118084526 nonsynonymous SNV 0.931 4 22 hPsi_associated_SNPs_20902 0 0 0 0 2 unknown 0.438718810565242 0.438718592457975 0 0 hPsi_site_14626 iPseU_CNN:0;iRNA_PseU:0 14627 chr4 9783938 9783938 1 + G A LUAD 9783937 + 9783917 9783957 41 TTTCGTGGCGCTGCTGGTCATGCCCTGGAAGGCAGTCGCCG TTTCGTGGCGCTGCTGGTCATACCCTGGAAGGCAGTCGCCG < 41bp 0.48449817487398 0.856743830130487 0.21476024 0.45109922 prediction 0.713487660260974 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9783937 chr4:9783938 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_20903 0 0 0 0 0 unknown 0.438726707852508 0.438721662276242 0 0 hPsi_site_14627 iPseU_CNN:0;iRNA_PseU:0 14628 chr3 132319410 132319410 1 + G A BLCA 132319409 + 132319389 132319429 41 ATAGTTTTCGTCATTGGACTTGCAGGCAATTCCATGGTAGT ATAGTTTTCGTCATTGGACTTACAGGCAATTCCATGGTAGT < 41bp 0.500633929786479 0.8573744707711 0.21104163 0.31175697 prediction 0.713481081969243 Functional Gain - ACKR4 ENSG00000129048 CDS Human protein_coding chr3:132319409 chr3:132319410 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20904 0 0 0 0 0 exosome 0.438723635948924 0.43871869435139 0 0 hPsi_site_14628 iPseU_CNN:0;iRNA_PseU:0 14629 chr14 37132396 37132396 1 + G A LGG 37132395 + 37132375 37132415 41 GAGACCCCGGCATCTTCGCCTGGGAGATCCGGGACCGCCTG GAGACCCCGGCATCTTCGCCTAGGAGATCCGGGACCGCCTG < 41bp 0.457594493904887 0.856719097880682 0.3003802 0.36295024 prediction 0.713438195761364 Functional Gain - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132395 chr14:37132396 stopgain 1.000 1 22 hPsi_associated_SNPs_20905 0 0 1 0 0 chromatin 0.438723253848509 0.438643554559957 0 0 hPsi_site_14629 iPseU_CNN:0;iRNA_PseU:0 14630 chr11 123886956 123886956 1 + G A OV 123886955 + 123886935 123886975 41 GTCCATCGTCTGTTCCATCCTGCGGATCCGCACCTCAGATG GTCCATCGTCTGTTCCATCCTACGGATCCGCACCTCAGATG < 41bp 0.51106537651026 0.867784034634123 0.16717991 0.45886156 prediction 0.713437316247726 Functional Gain - OR10G4 ENSG00000254737 CDS Human protein_coding chr11:123886955 chr11:123886956 synonymous SNV . 0 22 hPsi_associated_SNPs_20906 0 0 0 0 0 unknown 0.438729224370561 0.438711249259486 0 0 hPsi_site_14630 iPseU_CNN:0;iRNA_PseU:0 14631 chr3 184290348 184290348 1 + G A rs9862375 184290347 + 184290327 184290367 41 TCCCATCCGCACATACCAGGTGTGTAATGTGCGCGAGTCAA TCCCATCCGCACATACCAGGTATGTAATGTGCGCGAGTCAA < 41bp 0.47317234212569 0.856712362858197 0.15241179 0.2594698 prediction 0.713424725716394 Functional Gain - EPHB3 ENSG00000182580 CDS Human protein_coding chr3:184290347 chr3:184290348 synonymous SNV . 0 22 hPsi_associated_SNPs_20907 0 0 0 0 1 Endoplasmic reticulum 0.438786221481412 0.439050101837847 0 0 hPsi_site_14631 iPseU_CNN:0;iRNA_PseU:0 14632 chr1 206902144 206902144 1 + G A rs145730948 206902143 + 206902123 206902163 41 CATCGTACGGATCGTGGATGTGTACGAGAATCTGTACGCAG CATCGTACGGATCGTGGATGTATACGAGAATCTGTACGCAG < 41bp 0.529082818434762 0.88579460415869 0.46033242 0.80710375 prediction 0.713423571447856 Functional Gain - MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902143 chr1:206902144 synonymous SNV . 0 22 hPsi_associated_SNPs_20908 0 0 1 0 2 Ribosome 0.437592117120177 0.450629424289748 0.6142075 0 hPsi_site_14632 iPseU_CNN:0.6142075;iRNA_PseU:0 14633 chr16 71570847 71570847 1 + G A rs148657245 71570846 + 71570826 71570866 41 CAAGCAGAGCACCGCCTGGATGCTGCACATGGCTGTGCGGG CAAGCAGAGCACCGCCTGGATACTGCACATGGCTGTGCGGG < 41bp 0.462190152290783 0.856709586474079 0.24541554 0.5678059 prediction 0.713419172948157 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71570846 chr16:71570847 nonsynonymous SNV 0.031 1 22 hPsi_associated_SNPs_20909 0 0 0 0 0 exosome 0.438627106417263 0.43869988218199 0.1356118 0 hPsi_site_14633 iPseU_CNN:0.1356118;iRNA_PseU:0 14634 chr19 55823314 55823314 1 + G A COAD 55823313 + 55823293 55823333 41 GCCCAGACCCGGCCTGCTGGTGCCCCACCCCGAAGCCTGCA GCCCAGACCCGGCCTGCTGGTACCCCACCCCGAAGCCTGCA < 41bp 0.525733861257705 0.882443226261962 0.25291893 0.78068066 prediction 0.713418730008514 Functional Gain - BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55823313 chr19:55823314 nonsynonymous SNV 0.348 0 22 hPsi_associated_SNPs_20910 0 0 0 0 1 chromatin 0.438718398125861 0.438681217745221 0.56136132 0 hPsi_site_14634 iPseU_CNN:0.56136132;iRNA_PseU:0 14635 chr12 111885584 111885584 1 + G A BLCA 111885583 + 111885563 111885603 41 CACTCGAGTGCGGCGCCGCCTGTGATGTCCGGCTCTCCAGC CACTCGAGTGCGGCGCCGCCTATGATGTCCGGCTCTCCAGC < 41bp 0.462039109538354 0.856708059269469 0.47667685 0.49174538 prediction 0.713416118538939 Functional Gain - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111885583 chr12:111885584 nonsynonymous SNV 0.256 4 22 hPsi_associated_SNPs_20911 0 0 1 0 1 Ribosome 0.438989794873682 0.438831900761005 0 0 hPsi_site_14635 iPseU_CNN:0;iRNA_PseU:0 14636 chr6 167728775 167728775 1 + G A rs9459921 167728774 + 167728754 167728794 41 CATTGCCTTCGGGTACAGCATGTTTTTGTGCGTGCACGTCA CATTGCCTTCGGGTACAGCATATTTTTGTGCGTGCACGTCA < 41bp 0.523428052920339 0.880122990499586 0.33670115 0.44365746 prediction 0.713389875158495 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167728774 chr6:167728775 nonsynonymous SNV 0.012 2 22 hPsi_associated_SNPs_20912 0 0 0 0 0 cytosol 0.437804999266372 0.438505515300856 0 0 hPsi_site_14636 iPseU_CNN:0;iRNA_PseU:0 14637 chr17 41143116 41143116 1 + G A STAD 41143115 + 41143095 41143135 41 CATGACCATGTCATCACCTCTGCCAACCTCCAGGACCTCTC CATGACCATGTCATCACCTCTACCAACCTCCAGGACCTCTC < 41bp 0.517174730990759 0.873865323538265 0.39880502 0.6389759 prediction 0.713381185095013 Functional Gain - RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41143115 chr17:41143116 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_20913 0 0 1 0 0 exosome 0.438669440671681 0.438683848140136 0.2779518 0 hPsi_site_14637 iPseU_CNN:0.2779518;iRNA_PseU:0 14638 chr19 3115002 3115002 1 + G A UCEC 3115001 + 3114981 3115021 41 CCTGCCCACCCAGCAGGACGTGCTGCGGGTCCGCGTGCCCA CCTGCCCACCCAGCAGGACGTACTGCGGGTCCGCGTGCCCA < 41bp 0.460364802795157 0.856684865324967 0.41839844 0.8596979 prediction 0.713369730649934 Functional Gain - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3115001 chr19:3115002 synonymous SNV . 0 22 hPsi_associated_SNPs_20914 0 0 1 0 2 Cytosol 0.4387467779817 0.438728370222984 0.7193958 0 hPsi_site_14638 iPseU_CNN:0.7193958;iRNA_PseU:0 14639 chr14 74824243 74824243 1 + G A rs61730671 74824242 + 74824222 74824262 41 GTGGAGGCTGAAGGTGCCCCTGGCGTGGCCCCAGCTCTTCC GTGGAGGCTGAAGGTGCCCCTAGCGTGGCCCCAGCTCTTCC < 41bp 0.464713562956889 0.856681510186636 0.19441995 0.22922009 prediction 0.713363020373273 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74824242 chr14:74824243 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_20915 0 0 0 0 0 unknown 0.438718364896278 0.438718593328758 0 0 hPsi_site_14639 iPseU_CNN:0;iRNA_PseU:0 14640 chr16 28848097 28848097 1 + G A LUAD 28848096 + 28848076 28848116 41 CCTTCCACCCCCCGGGGAACTGAAGATTGTCCTGGCCGCGA CCTTCCACCCCCCGGGGAACTAAAGATTGTCCTGGCCGCGA < 41bp 0.5035230642379 0.860189674793867 0.14517635 0.20292556 prediction 0.713333221111935 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28848096 chr16:28848097 synonymous SNV . 0 22 hPsi_associated_SNPs_20916 0 0 1 0 2 Cytosol 0.438714248920526 0.438718593232265 0 0 hPsi_site_14640 iPseU_CNN:0;iRNA_PseU:0 14641 chr15 75116811 75116811 1 + G A ESCA 75116810 + 75116790 75116830 41 TGTAGGCTTCTTCGGCTACGTGCACTTCAGGTGGGCCACCC TGTAGGCTTCTTCGGCTACGTACACTTCAGGTGGGCCACCC < 41bp 0.521360732946858 0.878026695487739 0.3572014 0.8784777 prediction 0.713331925081762 Functional Gain - LMAN1L ENSG00000140506 CDS Human protein_coding chr15:75116810 chr15:75116811 synonymous SNV . 0 22 hPsi_associated_SNPs_20917 0 0 0 0 1 Endoplasmic reticulum 0.438721532600162 0.438719054445508 0.7569554 0 hPsi_site_14641 iPseU_CNN:0.7569554;iRNA_PseU:0 14642 chr2 73118555 73118555 1 + G A CESC 73118554 + 73118534 73118574 41 GCGAAAAGGGCTGCAGGAGCTGAAGGCAAAGGGGAAGCTGG GCGAAAAGGGCTGCAGGAGCTAAAGGCAAAGGGGAAGCTGG < 41bp 0.507516134540427 0.864179622584408 0.28721708 0.51249266 prediction 0.713326976087961 Functional Gain - SPR ENSG00000116096 CDS Human protein_coding chr2:73118554 chr2:73118555 synonymous SNV . 0 22 hPsi_associated_SNPs_20918 0 0 1 0 1 Ribosome 0.438718594696911 0.438718669904167 0.0249853200000001 0 hPsi_site_14642 iPseU_CNN:0.0249853200000001;iRNA_PseU:0 14643 chr10 101611294 101611294 1 + G A rs8187710 101611293 + 101611273 101611313 41 ACAACGGGAAGATTATAGAGTGCGGCAGCCCTGAAGAACTG ACAACGGGAAGATTATAGAGTACGGCAGCCCTGAAGAACTG < 41bp 0.484492896267302 0.856655418338821 0.23860908 0.39913377 prediction 0.713310836677642 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101611293 chr10:101611294 nonsynonymous SNV 0.575 0 22 hPsi_associated_SNPs_20919 1 0 1 0 0 Endoplasmic reticulum 0.438715694743861 0.438718609393242 0 0 hPsi_site_14643 iPseU_CNN:0;iRNA_PseU:0 14644 chr19 8122777 8122777 1 + G A UCEC 8122776 + 8122756 8122796 41 ATCAGCAGCAGTAAGAGGAATGTCTCCCTCCTGATATCAGC ATCAGCAGCAGTAAGAGGAATATCTCCCTCCTGATATCAGC < 41bp 0.514813426228732 0.871464936333766 0.37379485 0.6460549 prediction 0.713303020210069 Functional Gain - CCL25 ENSG00000131142 CDS Human protein_coding chr19:8122776 chr19:8122777 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_20920 0 0 0 0 2 Cytosol 0.438703559945633 0.438676777522905 0.2921098 0 hPsi_site_14644 iPseU_CNN:0.2921098;iRNA_PseU:0 14645 chr12 109948177 109948177 1 + G A UCEC 109948176 + 109948156 109948196 41 CAAGGGTGAGACCTTGGAGCTGTTCCAGTCTGTCCACGGGT CAAGGGTGAGACCTTGGAGCTATTCCAGTCTGTCCACGGGT < 41bp 0.466822165241172 0.856648108029127 0.31700298 0.46288294 prediction 0.713296216058254 Functional Gain - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109948176 chr12:109948177 synonymous SNV . 0 22 hPsi_associated_SNPs_20921 0 0 1 0 2 Cytosol 0.424089704033649 0.438383516439835 0 0 hPsi_site_14645 iPseU_CNN:0;iRNA_PseU:0 14646 chr1 179523663 179523663 1 + C T BRCA 179523664 - 179523644 179523684 41 GAATTCTTCTTTCCACAGGTTGCCTTGGATTCAGTGACCTG GAATTCTTCTTTCCACAGGTTACCTTGGATTCAGTGACCTG < 41bp 0.473199657651801 0.856646986583125 0.27715135 0.6246178 prediction 0.713293973166249 Functional Gain - NPHS2 ENSG00000116218 CDS Human protein_coding chr1:179523664 chr1:179523663 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_20922 0 0 0 0 2 exosome 0.438660050436722 0.438527945668596 0.2492356 0 hPsi_site_14646 iPseU_CNN:0.2492356;iRNA_PseU:0 14647 chr2 73453455 73453455 1 + G A rs72809941 73453454 + 73453434 73453474 41 CTCCCCTCTCAACTTGCTGTTGATTTCTTTTGAGGGGTAAA CTCCCCTCTCAACTTGCTGTTAATTTCTTTTGAGGGGTAAA < 41bp 0.503589510267034 0.860234885814606 0.43909055 0.65644383 prediction 0.713290751095144 Functional Gain - SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453454 chr2:73453455 . . 0 22 hPsi_associated_SNPs_20923 0 0 1 1 0 Ribosome 0.438718592995088 0.43871859316622 0.31288766 0 hPsi_site_14647 iPseU_CNN:0.31288766;iRNA_PseU:0 14648 chr12 49221515 49221515 1 + G A UCEC 49221514 + 49221494 49221534 41 CGCCACCTGGAGGAGGACTATGCAGATGCCTACCAGGACCT CGCCACCTGGAGGAGGACTATACAGATGCCTACCAGGACCT < 41bp 0.516465922007411 0.873107990368331 0.36359668 0.6478081 prediction 0.713284136721841 Functional Gain - CACNB3 ENSG00000167535 CDS Human protein_coding chr12:49221514 chr12:49221515 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_20924 0 0 0 0 0 Ribosome 0.439089011595446 0.439407447403365 0.2956162 0 hPsi_site_14648 iPseU_CNN:0.2956162;iRNA_PseU:0 14649 chr11 45946129 45946129 1 + G A UCEC 45946128 + 45946108 45946148 41 ATGAAGCTGGTGCTGCCCAGTGCCTTGCCTGCTGAGCTGGC ATGAAGCTGGTGCTGCCCAGTACCTTGCCTGCTGAGCTGGC < 41bp 0.48562320749467 0.856629855684086 0.25562268 0.6140187 prediction 0.713259711368172 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45946128 chr11:45946129 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_20925 0 0 0 0 2 chromatin 0.438716069166929 0.438576487107245 0.2280374 0 hPsi_site_14649 iPseU_CNN:0.2280374;iRNA_PseU:0 14650 chr10 7759652 7759652 1 + G A rs140264160 7759651 + 7759631 7759671 41 TGTCCTCCCAGGAGCAAAGGTGCAGTTCGAACTTCACTACC TGTCCTCCCAGGAGCAAAGGTACAGTTCGAACTTCACTACC < 41bp 0.531119867178772 0.887708058877663 0.35337907 0.6066656 prediction 0.713176383397782 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7759651 chr10:7759652 synonymous SNV . 0 22 hPsi_associated_SNPs_20926 0 0 1 0 2 cytosol 0.438718592988804 0.438718592994472 0.2133312 0 hPsi_site_14650 iPseU_CNN:0.2133312;iRNA_PseU:0 14651 chr17 643763 643763 1 + G A LIHC 643762 + 643742 643782 41 CAGAGGCTCCGGGGAGACCTTGGGGACTTCTTTGTCGGCTG CAGAGGCTCCGGGGAGACCTTAGGGACTTCTTTGTCGGCTG < 41bp 0.465074518180984 0.85658184195914 0.24332336 0.29906195 prediction 0.71316368391828 Functional Gain - FAM57A ENSG00000167695 CDS Human protein_coding chr17:643762 chr17:643763 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_20927 0 0 1 0 1 Ribosome 0.438718594259044 0.438718430895849 0 0 hPsi_site_14651 iPseU_CNN:0;iRNA_PseU:0 14652 chr19 1979936 1979936 1 + G A CESC 1979935 + 1979915 1979955 41 GAACTCCACCAACGGGGAGCTGAATGCGGACGACCCCACGG GAACTCCACCAACGGGGAGCTAAATGCGGACGACCCCACGG < 41bp 0.463680060769032 0.856578514372284 0.27087593 0.7247654 prediction 0.713157028744567 Functional Gain - CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1979935 chr19:1979936 synonymous SNV . 0 22 hPsi_associated_SNPs_20928 0 0 1 0 2 Ribosome 0.438740981638954 0.440123354440241 0.4495308 0 hPsi_site_14652 iPseU_CNN:0.4495308;iRNA_PseU:0 14653 chr2 241401681 241401681 1 + G A UCEC 241401680 + 241401660 241401700 41 CCCCGGCGCCTTCGGAGAGCTGTACACGCAGAACGCGAGGG CCCCGGCGCCTTCGGAGAGCTATACACGCAGAACGCGAGGG < 41bp 0.522492379932013 0.87904910343991 0.18289301 0.58401 prediction 0.713113447015793 Functional Gain - GPC1 ENSG00000063660 CDS Human protein_coding chr2:241401680 chr2:241401681 synonymous SNV . 0 22 hPsi_associated_SNPs_20929 0 0 0 0 1 Cytosol 0.438650435279901 0.438717923606166 0.16802 0 hPsi_site_14653 iPseU_CNN:0.16802;iRNA_PseU:0 14654 chr5 147781951 147781951 1 + G A STAD 147781950 + 147781930 147781970 41 TGGAGTTGGTAGAATCCATTTGGACATATATGCCCCATGTT TGGAGTTGGTAGAATCCATTTAGACATATATGCCCCATGTT < 41bp 0.523547401164701 0.880084310270472 0.28789705 0.4717236 prediction 0.713073818211542 Functional Gain - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147781950 chr5:147781951 stopgain 1.000 1 22 hPsi_associated_SNPs_20930 0 0 1 0 0 Ribosome 0.438718622541913 0.438699006063428 0 0 hPsi_site_14654 iPseU_CNN:0;iRNA_PseU:0 14655 chrX 27766810 27766810 1 + G A UCEC 27766809 + 27766789 27766829 41 CACCAGGACTGGAGAAGTGGTGAAGCTGAATTTCCAGATGA CACCAGGACTGGAGAAGTGGTAAAGCTGAATTTCCAGATGA < 41bp 0.495061521478434 0.856514599184128 0.31781673 0.5800618 prediction 0.713029198368256 Functional Gain - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27766809 chrX:27766810 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_20931 0 0 0 0 0 exosome 0.438718592306092 0.438718593509338 0.1601236 0 hPsi_site_14655 iPseU_CNN:0.1601236;iRNA_PseU:0 14656 chrX 30236758 30236758 1 + G A SKCM 30236757 + 30236737 30236777 41 AAACGCCGCAAGGCCCGAGATGAGACCCGGGGTCTCAATGT AAACGCCGCAAGGCCCGAGATAAGACCCGGGGTCTCAATGT < 41bp 0.516159880546168 0.872672499667108 0.22977522 0.29552215 prediction 0.713025238241881 Functional Gain - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236757 chrX:30236758 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_20932 0 0 1 0 1 exosome 0.438719187050796 0.438711322323795 0 0 hPsi_site_14656 iPseU_CNN:0;iRNA_PseU:0 14657 chr20 33862274 33862274 1 + G A HNSC 33862273 + 33862253 33862293 41 CAACGATGTGCCGGGCTCCGTGAACGCCGTGGCCGTGGTCA CAACGATGTGCCGGGCTCCGTAAACGCCGTGGCCGTGGTCA < 41bp 0.475248683916311 0.856511383216705 0.46807623 0.7570584 prediction 0.713022766433409 Functional Gain - MMP24 ENSG00000125966 CDS Human protein_coding chr20:33862273 chr20:33862274 synonymous SNV . 0 22 hPsi_associated_SNPs_20933 0 0 0 0 0 Ribosome 0.443503176059748 0.438329065240361 0.5141168 0 hPsi_site_14657 iPseU_CNN:0.5141168;iRNA_PseU:0 14658 chr1 201981192 201981192 1 + G A BLCA 201981191 + 201981171 201981211 41 AAGTACGACGCAAGCGCCATTGACTTCTCACGATGTGACAT AAGTACGACGCAAGCGCCATTAACTTCTCACGATGTGACAT < 41bp 0.528435983310537 0.88494684843917 0.25327614 0.31519723 prediction 0.713021730257266 Functional Gain - ELF3 ENSG00000163435 CDS Human protein_coding chr1:201981191 chr1:201981192 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_20934 0 0 1 0 0 Endoplasmic reticulum 0.438711584885851 0.438718696493028 0 0 hPsi_site_14658 iPseU_CNN:0;iRNA_PseU:0 14659 chr9 91616914 91616914 1 + G A UCEC 91616913 + 91616893 91616933 41 TTCATCCTCTTCCTCATTGATGTGGCCTGCAGGGTGCAGGC TTCATCCTCTTCCTCATTGATATGGCCTGCAGGGTGCAGGC < 41bp 0.52382714456634 0.880336138111705 0.23549858 0.31186995 prediction 0.713017987090728 Functional Gain - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616913 chr9:91616914 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20935 0 0 0 0 0 cytosol 0.438676411811226 0.438710954033583 0 0 hPsi_site_14659 iPseU_CNN:0;iRNA_PseU:0 14660 chr22 25855390 25855390 1 + G A CESC 25855389 + 25855369 25855409 41 CTCTGGCCCTGCAGGTGGGTTGGCTACTAGTACCCTGGCTA CTCTGGCCCTGCAGGTGGGTTAGCTACTAGTACCCTGGCTA < 41bp 0.513634119265363 0.870142147809077 0.17274055 0.24495423 prediction 0.713016057087428 Functional Gain - CRYBB2P1 ENSG00000100058 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:25855389 chr22:25855390 . . 0 22 hPsi_associated_SNPs_20936 0 0 1 0 2 unknown 0.438718593256813 0.438718593544499 0 0 hPsi_site_14660 iPseU_CNN:0;iRNA_PseU:0 14661 chr1 117492112 117492112 1 + G A COAD 117492111 + 117492091 117492131 41 CTATTACTGCCACGTGTCCCTGTGGGCACCCGGACACAACA CTATTACTGCCACGTGTCCCTATGGGCACCCGGACACAACA < 41bp 0.521040436359215 0.877543650624567 0.25794727 0.3635347 prediction 0.713006428530703 Functional Gain - PTGFRN ENSG00000134247 CDS Human protein_coding chr1:117492111 chr1:117492112 synonymous SNV . 0 22 hPsi_associated_SNPs_20937 0 0 1 0 1 Ribosome 0.43658164705715 0.438567281948316 0 0 hPsi_site_14661 iPseU_CNN:0;iRNA_PseU:0 14662 chr5 121776381 121776381 1 + G A SKCM 121776380 + 121776360 121776400 41 GAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAA GAACAGGGCATCTCGTTGGATAAAGTAGACCAGGATGGCAA < 41bp 0.516835708351121 0.873336753142383 0.34841126 0.73620677 prediction 0.713002089582525 Functional Gain - SNCAIP ENSG00000064692 CDS Human protein_coding chr5:121776380 chr5:121776381 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20938 0 0 0 0 2 exosome 0.435105496817291 0.439341237031573 0.47241354 0 hPsi_site_14662 iPseU_CNN:0.47241354;iRNA_PseU:0 14663 chr12 58140014 58140014 1 + G A UCEC 58140013 + 58139993 58140033 41 AATTTGTAATCTCTTGCTCATGTCTGGCTATTAACCGAAGC AATTTGTAATCTCTTGCTCATATCTGGCTATTAACCGAAGC < 41bp 0.507916203416788 0.864410710988329 0.23240325 0.2622636 prediction 0.712989015143082 Functional Gain - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140013 chr12:58140014 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20939 0 0 1 0 2 Ribosome 0.438718806170557 0.438718735113369 0 0 hPsi_site_14663 iPseU_CNN:0;iRNA_PseU:0 14664 chr18 76753494 76753494 1 + G A CESC 76753493 + 76753473 76753513 41 CTCGGGCATCCCCTACGGCATGTCGCTGCCCCCCGAGAAGC CTCGGGCATCCCCTACGGCATATCGCTGCCCCCCGAGAAGC < 41bp 0.520810511731989 0.877298843937352 0.45797113 0.7557702 prediction 0.712976664410726 Functional Gain - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76753493 chr18:76753494 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_20940 0 0 0 0 0 exosome 0.438718593299776 0.438718593051264 0.5115404 0 hPsi_site_14664 iPseU_CNN:0.5115404;iRNA_PseU:0 14665 chr1 248551653 248551653 1 + G A SKCM 248551652 + 248551632 248551672 41 CTCTTCACACATGATGGTGGTGACATTGTTCTATGGGGCTG CTCTTCACACATGATGGTGGTAACATTGTTCTATGGGGCTG < 41bp 0.503073024628281 0.85955150162446 0.2871817 0.83474374 prediction 0.712956953992359 Functional Gain - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551652 chr1:248551653 synonymous SNV . 0 22 hPsi_associated_SNPs_20941 0 0 0 0 0 unknown 0.438720151995764 0.438713543553925 0.66948748 0 hPsi_site_14665 iPseU_CNN:0.66948748;iRNA_PseU:0 14666 chr2 242289532 242289532 1 + G A LIHC 242289531 + 242289511 242289551 41 TGCAAGGATGCAGGCGCAGATGCAGATGCAGATGCAGGGCG TGCAAGGATGCAGGCGCAGATACAGATGCAGATGCAGGGCG < 41bp 0.528066023866899 0.884542908189546 0.24572721 0.35800636 prediction 0.712953768645294 Functional Gain - SEPT2 ENSG00000168385 CDS Human protein_coding chr2:242289531 chr2:242289532 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_20942 0 0 1 0 2 Ribosome 0.436095581235439 0.438110056456899 0 0 hPsi_site_14666 iPseU_CNN:0;iRNA_PseU:0 14667 chrX 47429050 47429050 1 + G A rs62636604 47429049 + 47429029 47429069 41 GCAGCCCTCAGGATCTGTGCTGTGGATGGTGAGTTGGGCCA GCAGCCCTCAGGATCTGTGCTATGGATGGTGAGTTGGGCCA < 41bp 0.468253254563911 0.856476334295098 0.2660944 0.32620728 prediction 0.712952668590195 Functional Gain - ARAF ENSG00000078061 CDS Human protein_coding chrX:47429049 chrX:47429050 synonymous SNV . 0 22 hPsi_associated_SNPs_20943 0 0 1 0 1 Cytosol 0.430427283592318 0.43798264857545 0 0 hPsi_site_14667 iPseU_CNN:0;iRNA_PseU:0 14668 chr19 10224985 10224985 1 + G A BLCA 10224984 + 10224964 10225004 41 CGGCGCCCTCGGGCGGGCCGTGCTACGCAGCCCAGGCATGA CGGCGCCCTCGGGCGGGCCGTACTACGCAGCCCAGGCATGA < 41bp 0.47618881508517 0.856470841753342 0.29040998 0.8905363 prediction 0.712941683506684 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224984 chr19:10224985 synonymous SNV . 0 22 hPsi_associated_SNPs_20944 0 0 0 0 0 unknown 0.438708645782676 0.438783072896084 0.7810726 0 hPsi_site_14668 iPseU_CNN:0.7810726;iRNA_PseU:0 14669 chr22 32754286 32754286 1 + G A rs9621426 32754285 + 32754265 32754305 41 GGAGCCCCATGGGGAGGATCTGCTTTGCTGTTGCTGTTCCA GGAGCCCCATGGGGAGGATCTACTTTGCTGTTGCTGTTCCA < 41bp 0.522326174068779 0.87878817283528 0.28233218 0.49748307 prediction 0.712923997533002 Functional Gain - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32754285 chr22:32754286 synonymous SNV . 0 22 hPsi_associated_SNPs_20945 0 0 0 0 0 exosome 0.438718595703661 0.438718595041239 0 0 hPsi_site_14669 iPseU_CNN:0;iRNA_PseU:0 14670 chr7 141464790 141464790 1 + G A BLCA 141464789 + 141464769 141464809 41 GTAATGACAATGTTTTATCCTGCTGGCCACTCATTTATTCT GTAATGACAATGTTTTATCCTACTGGCCACTCATTTATTCT < 41bp 0.501799588966369 0.85825738268335 0.16348031 0.2417036 prediction 0.712915587433961 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464789 chr7:141464790 nonsynonymous SNV 0.052 0 22 hPsi_associated_SNPs_20946 0 0 1 0 0 exosome 0.438510968667719 0.438718274215486 0 0 hPsi_site_14670 iPseU_CNN:0;iRNA_PseU:0 14671 chr11 65088564 65088564 1 + G A UCEC 65088563 + 65088543 65088583 41 GCAGGGCAAGTTCCACCTCCTGCCGGGGACCATGGTGGAGG GCAGGGCAAGTTCCACCTCCTACCGGGGACCATGGTGGAGG < 41bp 0.470362808225258 0.856438071433671 0.21750093 0.43728638 prediction 0.712876142867341 Functional Gain - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088563 chr11:65088564 synonymous SNV . 0 22 hPsi_associated_SNPs_20947 0 0 0 0 0 Cytosol 0.438718592994472 0.438718592702932 0 0 hPsi_site_14671 iPseU_CNN:0;iRNA_PseU:0 14672 chr17 40275183 40275183 1 + G A BLCA 40275182 + 40275162 40275202 41 ACAGAAGGTGCACCGGAAAATGCTCCCGTCCAACCTGAGTC ACAGAAGGTGCACCGGAAAATACTCCCGTCCAACCTGAGTC < 41bp 0.488363654495697 0.856426372923377 0.28414917 0.6360544 prediction 0.712852745846753 Functional Gain - HSPB9 ENSG00000197723 CDS Human other chr17:40275182 chr17:40275183 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_20948 0 0 0 0 0 nucleoplasm 0.438718967328845 0.438718754294359 0.2721088 0 hPsi_site_14672 iPseU_CNN:0.2721088;iRNA_PseU:0 14673 chr16 3367335 3367335 1 + G A COAD 3367334 + 3367314 3367354 41 CAAAGAAAATCATTTTGATATGCACAGAGTGGGAAAATGGC CAAAGAAAATCATTTTGATATACACAGAGTGGGAAAATGGC < 41bp 0.501866268535476 0.858283573541281 0.2908314 0.44953763 prediction 0.71283461001161 Functional Gain - ZNF75A ENSG00000162086 CDS Human protein_coding chr16:3367334 chr16:3367335 nonsynonymous SNV 0.013 0 22 hPsi_associated_SNPs_20949 0 0 0 0 0 Cytosol 0.438795610932146 0.439019722235905 0 0 hPsi_site_14673 iPseU_CNN:0;iRNA_PseU:0 14674 chr17 2270641 2270641 1 + G A rs145103383 2270640 + 2270620 2270660 41 TGAGGAAGAGGAGGATAAACTGCACGCGATGCTCTCAATGA TGAGGAAGAGGAGGATAAACTACACGCGATGCTCTCAATGA < 41bp 0.526955018426477 0.883366655974071 0.24284041 0.46251976 prediction 0.712823275095188 Functional Gain - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2270640 chr17:2270641 synonymous SNV . 0 22 hPsi_associated_SNPs_20950 0 0 0 0 2 Cytosol 0.438472709495079 0.438921346375407 0 0 hPsi_site_14674 iPseU_CNN:0;iRNA_PseU:0 14675 chr16 68716246 68716246 1 + G A rs187260826 68716245 + 68716225 68716265 41 GAATGCAGTGGGCCATGAGGTGCAGAGGCTGACGGTCACTG GAATGCAGTGGGCCATGAGGTACAGAGGCTGACGGTCACTG < 41bp 0.499963766569701 0.856410359269231 0.3001232 0.6829518 prediction 0.712820718538463 Functional Gain - CDH3 ENSG00000062038 CDS Human protein_coding chr16:68716245 chr16:68716246 synonymous SNV . 0 22 hPsi_associated_SNPs_20951 0 0 0 0 1 Endoplasmic reticulum 0.4383514220998 0.438661902520351 0.3659036 0 hPsi_site_14675 iPseU_CNN:0.3659036;iRNA_PseU:0 14676 chr6 150240387 150240387 1 + G A OV 150240386 + 150240366 150240406 41 GAAGATCTGTCCATCGAAACTGAGCTGCCAAGATCCACTGC GAAGATCTGTCCATCGAAACTAAGCTGCCAAGATCCACTGC < 41bp 0.506773140921325 0.863182422371435 0.2746619 0.56857896 prediction 0.71281856290022 Functional Gain - RAET1G ENSG00000203722 CDS Human protein_coding chr6:150240386 chr6:150240387 synonymous SNV . 0 22 hPsi_associated_SNPs_20952 0 0 0 0 1 exosome 0.439121978999704 0.438722905696109 0.13715792 0 hPsi_site_14676 iPseU_CNN:0.13715792;iRNA_PseU:0 14677 chr7 143826719 143826719 1 + G A SKCM 143826718 + 143826698 143826738 41 CTGCCCTTCTGCGGGCCTCATGAAATCAACCACTTCTTCTG CTGCCCTTCTGCGGGCCTCATAAAATCAACCACTTCTTCTG < 41bp 0.494515628576595 0.856395152541705 0.14694604 0.1895648 prediction 0.712790305083409 Functional Gain - OR2A14 ENSG00000221938 CDS Human protein_coding chr7:143826718 chr7:143826719 nonsynonymous SNV 0.134 0 22 hPsi_associated_SNPs_20953 0 0 0 0 0 unknown 0.438718586336745 0.438718769397757 0 0 hPsi_site_14677 iPseU_CNN:0;iRNA_PseU:0 14678 chr17 72945469 72945469 1 + G A UCEC 72945468 + 72945448 72945488 41 TCTGGGGGTCTTCTACCGCATGCACTCTGTGGGAGGCCTGG TCTGGGGGTCTTCTACCGCATACACTCTGTGGGAGGCCTGG < 41bp 0.507565052964239 0.863954319574141 0.29901397 0.4887251 prediction 0.712778533219804 Functional Gain - OTOP3 ENSG00000182938 CDS Human protein_coding chr17:72945468 chr17:72945469 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20954 0 0 0 0 0 unknown 0.437595664154755 0.438679417764809 0 0 hPsi_site_14678 iPseU_CNN:0;iRNA_PseU:0 14679 chr5 5306714 5306714 1 + G A PAAD 5306713 + 5306693 5306733 41 GAGAGCTGGCCTCAAAGAAGTGCTCACATTTGCCGAAGCCC GAGAGCTGGCCTCAAAGAAGTACTCACATTTGCCGAAGCCC < 41bp 0.460205630116537 0.856370505441606 0.33931828 0.7290547 prediction 0.712741010883211 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5306713 chr5:5306714 nonsynonymous SNV 0.568 2 22 hPsi_associated_SNPs_20955 0 0 0 0 1 exosome 0.438837433333431 0.438739901769928 0.4581094 0 hPsi_site_14679 iPseU_CNN:0.4581094;iRNA_PseU:0 14680 chr19 41129900 41129900 1 + G A UCEC 41129899 + 41129879 41129919 41 GGCGGCCGCTGTGTCAACACTGTGGGCTCTTATCACTGTAC GGCGGCCGCTGTGTCAACACTATGGGCTCTTATCACTGTAC < 41bp 0.517190520329505 0.87355858373273 0.4424675 0.5630908 prediction 0.71273612680645 Functional Gain - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41129899 chr19:41129900 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_20956 0 0 1 0 2 Cytosol 0.441943793877327 0.439101053979841 0.1261816 0 hPsi_site_14680 iPseU_CNN:0.1261816;iRNA_PseU:0 14681 chrX 36116924 36116924 1 + G A UCEC 36116923 + 36116903 36116943 41 ATTTTAGTGCTCAAGGAGGATGTATTTCACATGTCCTGCCA ATTTTAGTGCTCAAGGAGGATATATTTCACATGTCCTGCCA < 41bp 0.50101614748227 0.857383445876689 0.20667353 0.32719088 prediction 0.71273459678884 Functional Gain - CFAP47 ENSG00000176034 CDS Human other chrX:36116923 chrX:36116924 nonsynonymous SNV 0.369 0 22 hPsi_associated_SNPs_20957 0 0 0 0 2 cytosol 0.440801276008565 0.438640689442316 0 0 hPsi_site_14681 iPseU_CNN:0;iRNA_PseU:0 14682 chr6 47682032 47682032 1 + G A UCEC 47682031 + 47682011 47682051 41 AATGCCAGAGCCCAGTGTGTTGGCTGGCACTCCAAGAAAAG AATGCCAGAGCCCAGTGTGTTAGCTGGCACTCCAAGAAAAG < 41bp 0.53155193258635 0.887902232685039 0.2849888 0.7140075 prediction 0.712700600197377 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47682031 chr6:47682032 nonsynonymous SNV 0.709 1 22 hPsi_associated_SNPs_20958 0 0 0 0 0 exosome 0.438718593002415 0.438718593123194 0.428015 0 hPsi_site_14682 iPseU_CNN:0.428015;iRNA_PseU:0 14683 chr12 100811900 100811900 1 + G A GBM 100811899 + 100811879 100811919 41 GAACCCTCTCTGGAATGGTCTGTCCCCTCATTGTCGGTGCA GAACCCTCTCTGGAATGGTCTATCCCCTCATTGTCGGTGCA < 41bp 0.527517973019585 0.883854904740241 0.7771199 0.91608584 prediction 0.712673863441311 Functional Gain - SLC17A8 ENSG00000179520 CDS Human protein_coding chr12:100811899 chr12:100811900 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_20959 0 0 0 0 2 exosome 0.437804221405323 0.438072555498866 0.27793188 0 hPsi_site_14683 iPseU_CNN:0.27793188;iRNA_PseU:0 14684 chr3 49211794 49211794 1 + G A SKCM 49211793 + 49211773 49211813 41 TCCATGCCCACACCCTGCTATGGGGCCTCCACCTTCCTGCA TCCATGCCCACACCCTGCTATAGGGCCTCCACCTTCCTGCA < 41bp 0.533668011746455 0.890002432595927 0.30565658 0.470836 prediction 0.712668841698943 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49211793 chr3:49211794 nonsynonymous SNV 0.957 3 22 hPsi_associated_SNPs_20960 0 0 1 0 1 Cytosol 0.438718485963498 0.43871832958758 0 0 hPsi_site_14684 iPseU_CNN:0;iRNA_PseU:0 14685 chr11 19197407 19197407 1 + G A LGG 19197406 + 19197386 19197426 41 ACCTGGCAGATTTCTTTCAGTGTGGCTGCTTTGGCTTGGTG ACCTGGCAGATTTCTTTCAGTATGGCTGCTTTGGCTTGGTG < 41bp 0.507468698341535 0.863797889703799 0.2790211 0.4406605 prediction 0.712658382724528 Functional Gain - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19197406 chr11:19197407 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_20961 0 0 1 0 1 Nucleus 0.438718592995177 0.438718593005936 0 0 hPsi_site_14685 iPseU_CNN:0;iRNA_PseU:0 14686 chr11 31616371 31616371 1 + G A ESCA 31616370 + 31616350 31616390 41 AAAAAGGAATTTGATGAAGATGTATACAATCATAAAACACC AAAAAGGAATTTGATGAAGATATATACAATCATAAAACACC < 41bp 0.49320971102591 0.856316024401716 0.29425788 0.5277582 prediction 0.712632048803432 Functional Gain - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31616370 chr11:31616371 nonsynonymous SNV 0.507 0 22 hPsi_associated_SNPs_20962 0 0 1 2 1 Nucleus 0.436757244990121 0.436998639472848 0.0555163999999999 0 hPsi_site_14686 iPseU_CNN:0.0555163999999999;iRNA_PseU:0 14687 chr3 152554458 152554458 1 + G A UCEC 152554457 + 152554437 152554477 41 ATTTTCAGACCCCAGCAATGTGTGCTTTCAATGACAGGGTT ATTTTCAGACCCCAGCAATGTATGCTTTCAATGACAGGGTT < 41bp 0.481629672743428 0.856307773569157 0.30747706 0.3078267 prediction 0.712615547138313 Functional Gain - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152554457 chr3:152554458 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_20963 0 0 1 0 0 Endoplasmic reticulum 0.438718593741254 0.438718578757397 0 0 hPsi_site_14687 iPseU_CNN:0;iRNA_PseU:0 14688 chr10 121671613 121671613 1 + G A HNSC 121671612 + 121671592 121671632 41 GAATGGGGCACCACGCAAGATGGACAGACAAGGCCCAGGGT GAATGGGGCACCACGCAAGATAGACAGACAAGGCCCAGGGT < 41bp 0.46007916588057 0.856307447710163 0.17787898 0.255814 prediction 0.712614895420326 Functional Gain - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121671612 chr10:121671613 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20964 0 0 1 0 2 Nucleus 0.439337910227059 0.438718581454739 0 0 hPsi_site_14688 iPseU_CNN:0;iRNA_PseU:0 14689 chr16 16208683 16208683 1 + G A rs13337489 16208682 + 16208662 16208702 41 GGGGGATCTTGGCTTCCCGCTGTCTGCACGTGGACCTGCTG GGGGGATCTTGGCTTCCCGCTATCTGCACGTGGACCTGCTG < 41bp 0.462271772006726 0.856302548269756 0.24997264 0.6703514 prediction 0.712605096539513 Functional Gain - ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16208682 chr16:16208683 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_20965 0 0 1 0 0 Mitochondrion 0.438718593165228 0.43871859304906 0.3407028 0 hPsi_site_14689 iPseU_CNN:0.3407028;iRNA_PseU:0 14690 chr2 54028725 54028725 1 + G A CESC 54028724 + 54028704 54028744 41 TGAATATGAAGTTGTCATTTTGACACCACTCTTGTGCAGTC TGAATATGAAGTTGTCATTTTAACACCACTCTTGTGCAGTC < 41bp 0.514007106457141 0.870308599643004 0.23912129 0.54244035 prediction 0.712602986371727 Functional Gain - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54028724 chr2:54028725 synonymous SNV . 0 22 hPsi_associated_SNPs_20966 0 0 1 0 1 Endoplasmic reticulum 0.438785290103191 0.438543039629969 0.0848807 0 hPsi_site_14690 iPseU_CNN:0.0848807;iRNA_PseU:0 14691 chr19 15760928 15760928 1 + G A BLCA 15760927 + 15760907 15760947 41 CTCCCTAGCCAGGGTGTTGATGACTTCCTCCAAGCCAAGGC CTCCCTAGCCAGGGTGTTGATAACTTCCTCCAAGCCAAGGC < 41bp 0.450634192737262 0.85629296586102 0.32553118 0.58098364 prediction 0.712585931722041 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15760927 chr19:15760928 nonsynonymous SNV 0.021 1 22 hPsi_associated_SNPs_20967 0 0 1 0 1 exosome 0.438718591928002 0.438718640042633 0.16196728 0 hPsi_site_14691 iPseU_CNN:0.16196728;iRNA_PseU:0 14692 chrX 129629682 129629682 1 + G A STAD 129629681 + 129629661 129629701 41 CTGATGCTAAAGAAAAGAATTGTGGTGTATCACCCCAAGAT CTGATGCTAAAGAAAAGAATTATGGTGTATCACCCCAAGAT < 41bp 0.503602330269902 0.859886018412012 0.7819284 0.7147758 prediction 0.712567376284221 Functional Gain - FAM45BP ENSG00000221930 ncRNA_exonic Human transcribed_processed_pseudogene chrX:129629681 chrX:129629682 . . 0 22 hPsi_associated_SNPs_20968 0 0 0 0 0 unknown 0.439274778255519 0.437927762597405 0 0 hPsi_site_14692 iPseU_CNN:0;iRNA_PseU:0 14693 chr16 3339723 3339723 1 + G A STAD 3339722 + 3339702 3339742 41 TACATGCAGCTGAAAGACTGTGTATGGGTGTGGACTGCACT TACATGCAGCTGAAAGACTGTATATGGGTGTGGACTGCACT < 41bp 0.479689659122979 0.856263880598386 0.23530608 0.31771857 prediction 0.712527761196773 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339722 chr16:3339723 nonsynonymous SNV 0.470 0 22 hPsi_associated_SNPs_20969 0 0 1 0 0 Cytosol 0.438770763815198 0.439090247953601 0 0 hPsi_site_14693 iPseU_CNN:0;iRNA_PseU:0 14694 chr19 47656242 47656242 1 + G A UCEC 47656241 + 47656221 47656261 41 ATCAAGTTCTTTACAGGAGATGTTTTTGGCTACCATGGATA ATCAAGTTCTTTACAGGAGATATTTTTGGCTACCATGGATA < 41bp 0.489795328299136 0.856247597085819 0.31542107 0.39129606 prediction 0.712495194171639 Functional Gain - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47656241 chr19:47656242 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_20970 0 0 1 0 1 Ribosome 0.438996850295432 0.438733616828539 0 0 hPsi_site_14694 iPseU_CNN:0;iRNA_PseU:0 14695 chr1 45269869 45269869 1 + G A LIHC 45269868 + 45269848 45269888 41 TCTGACTGTGGCCACAGTAGTGGAGTCAGCCCTTTGTGCTC TCTGACTGTGGCCACAGTAGTAGAGTCAGCCCTTTGTGCTC < 41bp 0.52826853471725 0.884495361354207 0.34135607 0.68776464 prediction 0.712453653273913 Functional Gain - PLK3 ENSG00000173846 CDS Human protein_coding chr1:45269868 chr1:45269869 synonymous SNV . 0 22 hPsi_associated_SNPs_20971 0 0 0 0 2 Cytosol 0.438548770109675 0.438566996687119 0.37552928 0 hPsi_site_14695 iPseU_CNN:0.37552928;iRNA_PseU:0 14696 chr2 95942026 95942026 1 + G A LUAD 95942025 + 95942005 95942045 41 CCAGCGCACGCATGAACAGATGGGCCCCAGCATCGAGGCCA CCAGCGCACGCATGAACAGATAGGCCCCAGCATCGAGGCCA < 41bp 0.531161932190808 0.887386070061998 0.18238786 0.6277313 prediction 0.71244827574238 Functional Gain - PROM2 ENSG00000155066 CDS Human protein_coding chr2:95942025 chr2:95942026 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_20972 0 0 0 0 2 Ribosome 0.438718778098827 0.432150501857946 0.2554626 0 hPsi_site_14696 iPseU_CNN:0.2554626;iRNA_PseU:0 14697 chr5 140475572 140475572 1 + G A LUAD 140475571 + 140475551 140475591 41 TTTTTCTTGAAACCTTCTGTTGAGAACTTTTACACTCTGGT TTTTTCTTGAAACCTTCTGTTAAGAACTTTTACACTCTGGT < 41bp 0.506972956420353 0.86319277646447 0.34443253 0.47609067 prediction 0.712439640088234 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475571 chr5:140475572 nonsynonymous SNV 0.725 0 22 hPsi_associated_SNPs_20973 0 0 0 0 0 exosome 0.438722734455651 0.439117825214002 0 0 hPsi_site_14697 iPseU_CNN:0;iRNA_PseU:0 14698 chrX 133609305 133609305 1 + G A CESC 133609304 + 133609284 133609324 41 GGGGGCTATAAATTCTTTGCTGACCTGCTGGATTACATCAA GGGGGCTATAAATTCTTTGCTAACCTGCTGGATTACATCAA < 41bp 0.473891097442684 0.856217435486181 0.2938294 0.46148646 prediction 0.712434870972362 Functional Gain - HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133609304 chrX:133609305 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20974 0 0 1 2 2 Cytosol 0.438718592995093 0.438718592996475 0 0 hPsi_site_14698 iPseU_CNN:0;iRNA_PseU:0 14699 chr2 74719495 74719495 1 + G A UCEC 74719494 + 74719474 74719514 41 CCAGCGTGGGCCCTGGCTGATGCCCAGGTGGCCCTTACCCT CCAGCGTGGGCCCTGGCTGATACCCAGGTGGCCCTTACCCT < 41bp 0.450217421565734 0.85621613145014 0.35179698 0.5288047 prediction 0.712432262900279 Functional Gain - TTC31 ENSG00000115282 CDS Human protein_coding chr2:74719494 chr2:74719495 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20975 0 0 1 0 1 Cytosol 0.438718592694779 0.438718592995069 0.0576094 0 hPsi_site_14699 iPseU_CNN:0.0576094;iRNA_PseU:0 14700 chr2 237489411 237489411 1 + G A SKCM 237489410 + 237489390 237489430 41 CCTCACCATCCCAGTCTGGGTGGTCAGTCTCGTGCAGCACA CCTCACCATCCCAGTCTGGGTAGTCAGTCTCGTGCAGCACA < 41bp 0.472913186438083 0.856206491921175 0.19601223 0.29730725 prediction 0.712412983842349 Functional Gain - ACKR3 ENSG00000144476 CDS Human protein_coding chr2:237489410 chr2:237489411 synonymous SNV . 0 22 hPsi_associated_SNPs_20976 0 0 1 0 0 Nucleus 0.438717054125975 0.438719509138139 0 0 hPsi_site_14700 iPseU_CNN:0;iRNA_PseU:0 14701 chr8 124824826 124824826 1 + G A rs1946586 124824825 + 124824805 124824845 41 GTTTGCTTTCACAGTCATCGTGTGCTGACATGGGTGTTCCA GTTTGCTTTCACAGTCATCGTATGCTGACATGGGTGTTCCA < 41bp 0.494082118286376 0.856195800485014 0.23265949 0.31664613 prediction 0.712391600970028 Functional Gain - FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124824825 chr8:124824826 nonsynonymous SNV 0.037 0 22 hPsi_associated_SNPs_20977 0 0 0 0 1 Ribosome 0.432054266555633 0.438986689801785 0 0 hPsi_site_14701 iPseU_CNN:0;iRNA_PseU:0 14702 chr2 233409220 233409220 1 + G A UCEC 233409219 + 233409199 233409239 41 GGAGGAGGTGGCCCTCTGCCTGCCTCGCAGTGAACTCCTCT GGAGGAGGTGGCCCTCTGCCTACCTCGCAGTGAACTCCTCT < 41bp 0.456525369597505 0.856194221487785 0.16930789 0.6673691 prediction 0.712388442975569 Functional Gain - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233409219 chr2:233409220 synonymous SNV . 0 22 hPsi_associated_SNPs_20978 0 0 0 0 1 chromatin 0.438718766201258 0.438719183377824 0.3347382 0 hPsi_site_14702 iPseU_CNN:0.3347382;iRNA_PseU:0 14703 chr3 129247696 129247696 1 + G A LUSC 129247695 + 129247675 129247715 41 GCCATGGCAGTTCTCCATGCTGGCCGCCTACATGTTTCTGC GCCATGGCAGTTCTCCATGCTAGCCGCCTACATGTTTCTGC < 41bp 0.481285631359708 0.856188018932532 0.15645358 0.28236687 prediction 0.712376037865065 Functional Gain - RHO ENSG00000163914 CDS Human protein_coding chr3:129247695 chr3:129247696 synonymous SNV . 0 22 hPsi_associated_SNPs_20979 0 0 0 0 0 Cytosol 0.438718256507413 0.438942944309669 0 0 hPsi_site_14703 iPseU_CNN:0;iRNA_PseU:0 14704 chr6 33663498 33663498 1 + C T BRCA 33663499 - 33663479 33663519 41 GGCGTTGCCTGCGTTTCCGCTGCTCCGTCATCTAGGGTTAA GGCGTTGCCTGCGTTTCCGCTACTCCGTCATCTAGGGTTAA < 41bp 0.486769740498103 0.856175233020878 0.29400304 0.75335896 prediction 0.712350466041757 Functional Gain - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33663499 chr6:33663498 stopgain 1.000 1 22 hPsi_associated_SNPs_20980 0 0 1 0 0 Endoplasmic reticulum 0.438718470182815 0.43873291375311 0.50671792 0 hPsi_site_14704 iPseU_CNN:0.50671792;iRNA_PseU:0 14705 chr7 29915505 29915505 1 + G A SKCM 29915504 + 29915484 29915524 41 GAAAGGCCGGAGTGCGCTGTTGGCTGATATCCAGCAAGGAA GAAAGGCCGGAGTGCGCTGTTAGCTGATATCCAGCAAGGAA < 41bp 0.456553310960119 0.856175180711223 0.16782317 0.30758947 prediction 0.712350361422446 Functional Gain - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29915504 chr7:29915505 synonymous SNV . 0 22 hPsi_associated_SNPs_20981 0 0 1 0 1 nucleolus 0.438718593487281 0.438717207676838 0 0 hPsi_site_14705 iPseU_CNN:0;iRNA_PseU:0 14706 chr6 88773872 88773872 1 + G A UCEC 88773871 + 88773851 88773891 41 TGATGCAGCCCTAATTTTTGTGCTGACCATAGGAGTCATTA TGATGCAGCCCTAATTTTTGTACTGACCATAGGAGTCATTA < 41bp 0.519463738450924 0.87563014838867 0.21469787 0.35969156 prediction 0.712332819875491 Functional Gain - SPACA1 ENSG00000118434 CDS Human protein_coding chr6:88773871 chr6:88773872 synonymous SNV . 0 22 hPsi_associated_SNPs_20982 0 0 0 0 2 unknown 0.438722573470702 0.438732434891647 0 0 hPsi_site_14706 iPseU_CNN:0;iRNA_PseU:0 14707 chr10 71849899 71849899 1 + G A UCEC 71849898 + 71849878 71849918 41 AGACACATCTTGCTGGCAGTTGCCAATGACGAGGAGCTCAA AGACACATCTTGCTGGCAGTTACCAATGACGAGGAGCTCAA < 41bp 0.526356775597829 0.882518798092146 0.2688716 0.66830313 prediction 0.712324044988634 Functional Gain - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71849898 chr10:71849899 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_20983 0 0 1 1 2 Ribosome 0.440586738295258 0.439498475633669 0.33660626 0 hPsi_site_14707 iPseU_CNN:0.33660626;iRNA_PseU:0 14708 chr1 110466069 110466069 1 + G A SKCM 110466068 + 110466048 110466088 41 GTCAAGGACAGCACCATCGGTGGCTCACCACAGCCTCGCCC GTCAAGGACAGCACCATCGGTAGCTCACCACAGCCTCGCCC < 41bp 0.52891499032216 0.885069866455339 0.5180356 0.8132887 prediction 0.712309752266358 Functional Gain - CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466068 chr1:110466069 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_20984 0 0 0 0 0 chromatin 0.439576286685946 0.438718157499351 0.5905062 0 hPsi_site_14708 iPseU_CNN:0.5905062;iRNA_PseU:0 14709 chr10 14943203 14943203 1 + G A UCEC 14943202 + 14943182 14943222 41 TCGTCTTCCCCGAATAGCATTGTTTTCCACAAGAACCATAA TCGTCTTCCCCGAATAGCATTATTTTCCACAAGAACCATAA < 41bp 0.522209915504627 0.878363215440562 0.26264405 0.32237473 prediction 0.712306599871869 Functional Gain - SUV39H2 ENSG00000152455 CDS Human protein_coding chr10:14943202 chr10:14943203 synonymous SNV . 0 22 hPsi_associated_SNPs_20985 0 0 1 0 1 Cytosol 0.438718536732785 0.438718589636262 0 0 hPsi_site_14709 iPseU_CNN:0;iRNA_PseU:0 14710 chr16 3349601 3349601 1 + G A UCEC 3349600 + 3349580 3349620 41 CTTCCATCTATACAGCCGTTTGCAGCTCAAGATCACACCTT CTTCCATCTATACAGCCGTTTACAGCTCAAGATCACACCTT < 41bp 0.503926593842859 0.860068269732221 0.24545711 0.7021495 prediction 0.712283351778723 Functional Gain - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3349600 chr16:3349601 synonymous SNV . 0 22 hPsi_associated_SNPs_20986 0 0 0 1 0 exosome 0.438832723423637 0.43925787591205 0.404299 0 hPsi_site_14710 iPseU_CNN:0.404299;iRNA_PseU:0 14711 chr15 43476562 43476562 1 + G A BLCA 43476561 + 43476541 43476581 41 TCTCCATCAAAGAAAATACTTGAAAATTATGCCTGTTCACC TCTCCATCAAAGAAAATACTTAAAAATTATGCCTGTTCACC < 41bp 0.481377026075827 0.856139788007439 0.17764494 0.2503 prediction 0.712279576014878 Functional Gain - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43476561 chr15:43476562 synonymous SNV . 0 22 hPsi_associated_SNPs_20987 0 0 0 0 0 chromatin 0.438718592979558 0.438718517992285 0 0 hPsi_site_14711 iPseU_CNN:0;iRNA_PseU:0 14712 chr3 50295109 50295109 1 + G A COAD 50295108 + 50295088 50295128 41 TCAAGAACAACCTGAAGGACTGCGGCCTCTTCTGAGGGGCA TCAAGAACAACCTGAAGGACTACGGCCTCTTCTGAGGGGCA < 41bp 0.4697105325318 0.856137158260607 0.30774045 0.6017127 prediction 0.712274316521213 Functional Gain - GNAI2 ENSG00000114353 CDS Human protein_coding chr3:50295108 chr3:50295109 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_20988 0 0 1 0 1 Ribosome 0.43871859235991 0.43871840167126 0.2034254 0 hPsi_site_14712 iPseU_CNN:0.2034254;iRNA_PseU:0 14713 chr1 244217947 244217947 1 + G A LUAD 244217946 + 244217926 244217966 41 GAGAAAGAGGCTTCCTGTGATGAGAGTGATGTTGGCACTAA GAGAAAGAGGCTTCCTGTGATAAGAGTGATGTTGGCACTAA < 41bp 0.4936592944421 0.856135974632485 0.29764715 0.37354937 prediction 0.71227194926497 Functional Gain - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244217946 chr1:244217947 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_20989 0 0 1 0 1 Cytosol 0.437615559786809 0.438721986436147 0 0 hPsi_site_14713 iPseU_CNN:0;iRNA_PseU:0 14714 chr7 23826166 23826166 1 + G A CESC 23826165 + 23826145 23826185 41 GACACAGAAGCCAAGGTGATTGAGAGAGCAGCCACCTACCA GACACAGAAGCCAAGGTGATTAAGAGAGCAGCCACCTACCA < 41bp 0.468781974027176 0.856135602493597 0.26442313 0.28377128 prediction 0.712271204987195 Functional Gain - STK31 ENSG00000196335 CDS Human protein_coding chr7:23826165 chr7:23826166 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_20990 0 0 0 0 2 exosome 0.438719248882471 0.438718626125355 0 0 hPsi_site_14714 iPseU_CNN:0;iRNA_PseU:0 14715 chrX 79698692 79698692 1 + G A UCEC 79698691 + 79698671 79698711 41 CCAGGAAGCAATGACACATTTGCAACACAAGCTCATATGTA CCAGGAAGCAATGACACATTTACAACACAAGCTCATATGTA < 41bp 0.480782786232563 0.856126676621114 0.6118407 0.89395666 prediction 0.712253353242228 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79698691 chrX:79698692 synonymous SNV . 0 22 hPsi_associated_SNPs_20991 0 0 0 0 0 unknown 0.438718134506793 0.438718424163243 0.56423192 0 hPsi_site_14715 iPseU_CNN:0.56423192;iRNA_PseU:0 14716 chr1 35260407 35260407 1 + G A UCEC 35260406 + 35260386 35260426 41 CCTGCCCCTACCTCGTGGACTGCTTTGTCTCTCGCCCCACG CCTGCCCCTACCTCGTGGACTACTTTGTCTCTCGCCCCACG < 41bp 0.527733506349346 0.88384972528269 0.37639558 0.6819531 prediction 0.712232437866687 Functional Gain - GJA4 ENSG00000187513 CDS Human protein_coding chr1:35260406 chr1:35260407 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_20992 0 0 0 0 0 cytosol 0.436760097010621 0.43867266366619 0.3639062 0 hPsi_site_14716 iPseU_CNN:0.3639062;iRNA_PseU:0 14717 chr12 122396276 122396276 1 + G A rs138364725 122396275 + 122396255 122396295 41 TAGAGCCCAAGGATGCCATTTGTGCCATCTCCTGCCACCCA TAGAGCCCAAGGATGCCATTTATGCCATCTCCTGCCACCCA < 41bp 0.533543401973774 0.889648730355743 0.5267976 0.54254156 prediction 0.712210656763937 Functional Gain - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122396275 chr12:122396276 nonsynonymous SNV 0.934 0 22 hPsi_associated_SNPs_20993 0 0 0 0 1 chromatin 0.438718637056383 0.438718533998946 0.03148792 0 hPsi_site_14717 iPseU_CNN:0.03148792;iRNA_PseU:0 14718 chr17 31324506 31324506 1 + G A STAD 31324505 + 31324485 31324525 41 GGATACCGTTATCTGTGCCATGAAGATAACCCAAGAGCCTC GGATACCGTTATCTGTGCCATAAAGATAACCCAAGAGCCTC < 41bp 0.521794994814191 0.877896872979332 0.20560244 0.3942882 prediction 0.712203756330282 Functional Gain - SPACA3 ENSG00000141316 CDS Human protein_coding chr17:31324505 chr17:31324506 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_20994 0 0 0 1 2 unknown 0.438877685560193 0.438718601724998 0 0 hPsi_site_14718 iPseU_CNN:0;iRNA_PseU:0 14719 chr11 129993553 129993553 1 + G A rs117994299 129993552 + 129993532 129993572 41 GGGGCCCTGCCGGGCCGTGATGCCTCGTTGGTACTTCGACC GGGGCCCTGCCGGGCCGTGATACCTCGTTGGTACTTCGACC < 41bp 0.530761904446153 0.886862085832567 0.18995976 0.30736196 prediction 0.712200362772828 Functional Gain - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129993552 chr11:129993553 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_20995 0 0 1 0 1 Endoplasmic reticulum 0.438718592995643 0.438718593368558 0 0 hPsi_site_14719 iPseU_CNN:0;iRNA_PseU:0 14720 chr12 81102635 81102635 1 + G A SKCM 81102634 + 81102614 81102654 41 CGCTCAGGAGGAGCAAGTATTGATTCGTCAGCCTCGAGTAG CGCTCAGGAGGAGCAAGTATTAATTCGTCAGCCTCGAGTAG < 41bp 0.479780293494928 0.856094707792449 0.39705175 0.40226603 prediction 0.712189415584899 Functional Gain - MYF6 ENSG00000111046 CDS Human protein_coding chr12:81102634 chr12:81102635 nonsynonymous SNV 0.017 3 22 hPsi_associated_SNPs_20996 0 0 0 0 1 unknown 0.438708683703771 0.43876848271475 0 0 hPsi_site_14720 iPseU_CNN:0;iRNA_PseU:0 14721 chr6 126296086 126296086 1 + G A CESC 126296085 + 126296065 126296105 41 GCTTGGCTTCTTATCCAAGTTGGTTTATAGAGTCAATTCCT GCTTGGCTTCTTATCCAAGTTAGTTTATAGAGTCAATTCCT < 41bp 0.510210037072843 0.866304647960608 0.2720749 0.3480177 prediction 0.712189221775528 Functional Gain - HINT3 ENSG00000111911 CDS Human protein_coding chr6:126296085 chr6:126296086 synonymous SNV . 0 22 hPsi_associated_SNPs_20997 0 0 1 0 2 Ribosome 0.438718592995101 0.438731165228624 0 0 hPsi_site_14721 iPseU_CNN:0;iRNA_PseU:0 14722 chr17 7162085 7162085 1 + G A rs76132587 7162084 + 7162064 7162104 41 AAAATAAAAGCTGCAGAGGTTGGGGGTGGGGTCAGGGATTC AAAATAAAAGCTGCAGAGGTTAGGGGTGGGGTCAGGGATTC < 41bp 0.485682706501712 0.856076220663312 0.148083 0.29475433 prediction 0.712152441326624 Functional Gain - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162084 chr17:7162085 stopgain 0.496 0 22 hPsi_associated_SNPs_20998 0 0 0 0 0 Cytosol 0.438718246979298 0.43871859299423 0 0 hPsi_site_14722 iPseU_CNN:0;iRNA_PseU:0 14723 chr13 111973258 111973258 1 + G A BLCA 111973257 + 111973237 111973277 41 AATGGAATACGTGCTGGAAGTGAAGAACTCTCCGCGGCACC AATGGAATACGTGCTGGAAGTAAAGAACTCTCCGCGGCACC < 41bp 0.520597021680351 0.876672598894948 0.32533634 0.7082909 prediction 0.712151154429193 Functional Gain - TEX29 ENSG00000153495 CDS Human protein_coding chr13:111973257 chr13:111973258 synonymous SNV . 0 22 hPsi_associated_SNPs_20999 0 0 0 0 2 exosome 0.438718582638738 0.438718605515686 0.4165818 0 hPsi_site_14723 iPseU_CNN:0.4165818;iRNA_PseU:0 14724 chr9 36121629 36121629 1 + G A CESC 36121628 + 36121608 36121648 41 GTGTTTGGATACTTCAGCATTGAATCAGAAATTGTGATCCT GTGTTTGGATACTTCAGCATTAAATCAGAAATTGTGATCCT < 41bp 0.474143840555813 0.856071364927412 0.32333678 0.3433192 prediction 0.712142729854824 Functional Gain - RECK ENSG00000122707 CDS Human protein_coding chr9:36121628 chr9:36121629 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_21000 0 0 1 0 2 exosome 0.438742156430234 0.438700712713533 0 0 hPsi_site_14724 iPseU_CNN:0;iRNA_PseU:0 14725 chr7 102389811 102389811 1 + G A CESC 102389810 + 102389790 102389830 41 CGCTGGCCCGGATCGGAGACTGAGGTCCCTCCGCCTGGCCC CGCTGGCCCGGATCGGAGACTAAGGTCCCTCCGCCTGGCCC < 41bp 0.514942875687892 0.871000788433162 0.63406855 0.8423811 prediction 0.712115825490539 Functional Gain - FAM185A ENSG00000222011 CDS Human protein_coding chr7:102389810 chr7:102389811 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21001 0 0 1 0 1 chromatin 0.438720923659861 0.438719102875573 0.4166251 0 hPsi_site_14725 iPseU_CNN:0.4166251;iRNA_PseU:0 14726 chr17 26821425 26821425 1 + G A LUAD 26821424 + 26821404 26821444 41 AGTAGAAAACCCAGGGAAGCTGAAGGCCCCTCTTGGCCTCC AGTAGAAAACCCAGGGAAGCTAAAGGCCCCTCTTGGCCTCC < 41bp 0.464027492039056 0.856051840830604 0.27527875 0.43868938 prediction 0.712103681661209 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26821424 chr17:26821425 synonymous SNV . 0 22 hPsi_associated_SNPs_21002 0 0 0 0 1 unknown 0.438718590962631 0.438718595422351 0 0 hPsi_site_14726 iPseU_CNN:0;iRNA_PseU:0 14727 chrX 142967347 142967347 1 + G A UCEC 142967346 + 142967326 142967366 41 GAATCAAAGGATTCCCCCTTTGAGGGAGGGACTTTTAAACG GAATCAAAGGATTCCCCCTTTAAGGGAGGGACTTTTAAACG < 41bp 0.492797571033003 0.856047299935157 0.17051381 0.2659279 prediction 0.712094599870314 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967346 chrX:142967347 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21003 0 0 0 0 0 unknown 0.438718593153426 0.438718592995102 0 0 hPsi_site_14727 iPseU_CNN:0;iRNA_PseU:0 14728 chr20 44512232 44512232 1 + G A COAD 44512231 + 44512211 44512251 41 AGCACTCCCTCAATGCCATCTGCACAGGGCCAGCAGCCCAA AGCACTCCCTCAATGCCATCTACACAGGGCCAGCAGCCCAA < 41bp 0.466444199575635 0.856035701643384 0.24275291 0.32017505 prediction 0.712071403286767 Functional Gain - ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44512231 chr20:44512232 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21004 0 0 1 0 0 nucleus 0.438719634401266 0.438718596631156 0 0 hPsi_site_14728 iPseU_CNN:0;iRNA_PseU:0 14729 chr10 48371251 48371251 1 + G A SKCM 48371250 + 48371230 48371270 41 TTCTGGGTGCCCCTACACTGTGGCTGGAGCATACCCAGGCC TTCTGGGTGCCCCTACACTGTAGCTGGAGCATACCCAGGCC < 41bp 0.466666558410504 0.856030445774483 0.26590598 0.84320295 prediction 0.712060891548965 Functional Gain - ZNF488 ENSG00000165388 CDS Human other chr10:48371250 chr10:48371251 stopgain . 0 22 hPsi_associated_SNPs_21005 0 0 0 0 0 exosome 0.438718175322889 0.440099114945081 0.6864059 0 hPsi_site_14729 iPseU_CNN:0.6864059;iRNA_PseU:0 14730 chr19 58967106 58967106 1 + G A rs143385944 58967105 + 58967085 58967125 41 ATGCAGGGCGTGCAGCAAAGTGTTCGTGAAGAGCTCCGACC ATGCAGGGCGTGCAGCAAAGTATTCGTGAAGAGCTCCGACC < 41bp 0.521239358355393 0.877257728904856 0.49520653 0.79964983 prediction 0.712036741098926 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58967105 chr19:58967106 synonymous SNV . 0 22 hPsi_associated_SNPs_21006 0 0 0 0 0 exosome 0.438719940262586 0.438718726395749 0.59929966 0 hPsi_site_14730 iPseU_CNN:0.59929966;iRNA_PseU:0 14731 chr1 159021571 159021571 1 + G A UCEC 159021570 + 159021550 159021590 41 CTGAACGCAACAGAATCATTTGTATATGAGCCCAAAGAGCA CTGAACGCAACAGAATCATTTATATATGAGCCCAAAGAGCA < 41bp 0.523434115601632 0.879448634558595 0.34159422 0.5200978 prediction 0.712029037913926 Functional Gain - IFI16 ENSG00000163565 CDS Human protein_coding chr1:159021570 chr1:159021571 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21007 0 0 1 0 0 exosome 0.440117941359447 0.439346749241814 0.0401956000000001 0 hPsi_site_14731 iPseU_CNN:0.0401956000000001;iRNA_PseU:0 14732 chr19 50940944 50940944 1 + G A CESC 50940943 + 50940923 50940963 41 AAGAAGTCGGATACTGCAGGTGAGCTGGATTTCAGTGGCCT AAGAAGTCGGATACTGCAGGTAAGCTGGATTTCAGTGGCCT < 41bp 0.465981659468946 0.856012022736721 0.31372735 0.36542216 prediction 0.712024045473441 Functional Gain - MYBPC2 ENSG00000086967 CDS Human protein_coding chr19:50940943 chr19:50940944 nonsynonymous SNV 0.880 1 22 hPsi_associated_SNPs_21008 0 0 0 0 2 exosome 0.439179496905737 0.438586869415813 0 0 hPsi_site_14732 iPseU_CNN:0;iRNA_PseU:0 14733 chr11 66276786 66276786 1 + G A UCEC 66276785 + 66276765 66276805 41 TGCAAGTGGCCCTCCATTCGTGTGTGTATTTAGGGGCTGGG TGCAAGTGGCCCTCCATTCGTATGTGTATTTAGGGGCTGGG < 41bp 0.482016111133645 0.856009630327493 0.15255523 0.23921922 prediction 0.712019260654986 Functional Gain - DPP3 ENSG00000256349 splicing Human protein_coding chr11:66276785 chr11:66276786 . 0.009 0 22 hPsi_associated_SNPs_21009 0 0 1 0 0 Nucleus 0.438819377745576 0.439688250490744 0 0 hPsi_site_14733 iPseU_CNN:0;iRNA_PseU:0 14734 chr8 145537210 145537210 1 + G A BLCA 145537209 + 145537189 145537229 41 CGGGCCAGGAATGAGCTCAGTGACCACTTGGATGCTATGGA CGGGCCAGGAATGAGCTCAGTAACCACTTGGATGCTATGGA < 41bp 0.467667193697694 0.856009301361011 0.2834748 0.3730141 prediction 0.712018602722022 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145537209 chr8:145537210 nonsynonymous SNV 0.891 1 22 hPsi_associated_SNPs_21010 0 0 1 0 2 chromatin 0.438718592978028 0.438718899163949 0 0 hPsi_site_14734 iPseU_CNN:0;iRNA_PseU:0 14735 chr19 17922586 17922586 1 + G A BRCA 17922585 + 17922565 17922605 41 GTACTATGTGCCAGAGGTGGTGACTCAGAATGAGCGGTACC GTACTATGTGCCAGAGGTGGTAACTCAGAATGAGCGGTACC < 41bp 0.463644144037393 0.855994727907573 0.45759705 0.83855665 prediction 0.711989455815146 Functional Gain - B3GNT3 ENSG00000179913 CDS Human protein_coding chr19:17922585 chr19:17922586 synonymous SNV . 0 22 hPsi_associated_SNPs_21011 0 0 0 0 0 Ribosome 0.438718593003511 0.438718586724164 0.6771133 0 hPsi_site_14735 iPseU_CNN:0.6771133;iRNA_PseU:0 14736 chr16 3254987 3254987 1 + G A LIHC 3254986 + 3254966 3255006 41 CTGTGGTTCTCACCTGGCTGTGGTTCTCCTCTTCTACAGCA CTGTGGTTCTCACCTGGCTGTAGTTCTCCTCTTCTACAGCA < 41bp 0.485894128234845 0.855993473673499 0.24886388 0.86364865 prediction 0.711986947346998 Functional Gain - OR1F1 ENSG00000168124 CDS Human protein_coding chr16:3254986 chr16:3254987 synonymous SNV . 0 22 hPsi_associated_SNPs_21012 0 0 0 0 0 exosome 0.438718592995094 0.438718589441263 0.7272973 0 hPsi_site_14736 iPseU_CNN:0.7272973;iRNA_PseU:0 14737 chr20 31828052 31828052 1 + G A UCEC 31828051 + 31828031 31828071 41 CTTTGCAGGCCCCTGGTCGGTGCAAGTCTGTTGAGGCTGGC CTTTGCAGGCCCCTGGTCGGTACAAGTCTGTTGAGGCTGGC < 41bp 0.465543471603304 0.855982332893106 0.35418648 0.87095 prediction 0.711964665786213 Functional Gain - BPIFA1 ENSG00000198183 CDS Human protein_coding chr20:31828051 chr20:31828052 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21013 0 0 0 0 1 unknown 0.438715965663778 0.438718576352521 0.7419 0 hPsi_site_14737 iPseU_CNN:0.7419;iRNA_PseU:0 14738 chr12 106740125 106740125 1 + G A LIHC 106740124 + 106740104 106740144 41 TCCAAGCCCTCAAAAATGCATGCCTCCTATGCCAGGAGGCC TCCAAGCCCTCAAAAATGCATACCTCCTATGCCAGGAGGCC < 41bp 0.482935364218412 0.855981797842255 0.24405438 0.43106782 prediction 0.71196359568451 Functional Gain - TCP11L2 ENSG00000166046 CDS Human protein_coding chr12:106740124 chr12:106740125 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_21014 0 0 0 0 1 nucleus 0.438718592806659 0.438718593199913 0 0 hPsi_site_14738 iPseU_CNN:0;iRNA_PseU:0 14739 chr11 55594829 55594829 1 + G A COAD 55594828 + 55594808 55594848 41 GTTGTTAGCCAATCTGGGCATGACTGCACTGATTCAGGTCA GTTGTTAGCCAATCTGGGCATAACTGCACTGATTCAGGTCA < 41bp 0.497125268910216 0.855977613203455 0.17144191 0.32034028 prediction 0.711955226406909 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55594828 chr11:55594829 nonsynonymous SNV 0.243 2 22 hPsi_associated_SNPs_21015 0 0 0 0 0 unknown 0.439522230959688 0.438717198173102 0 0 hPsi_site_14739 iPseU_CNN:0;iRNA_PseU:0 14740 chr17 37815007 37815007 1 + G A UCEC 37815006 + 37814986 37815026 41 GCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGG GCCCAGGTTGCTGTTGCCCGTAGACCCCTGCTGTTCTCCGG < 41bp 0.452550482461729 0.855973800821133 0.4291403 0.8232725 prediction 0.711947601642266 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815006 chr17:37815007 nonsynonymous SNV 0.847 1 22 hPsi_associated_SNPs_21016 0 0 1 1 2 Ribosome 0.438718592518992 0.438688864012598 0.646545 0 hPsi_site_14740 iPseU_CNN:0.646545;iRNA_PseU:0 14741 chr1 46871118 46871118 1 + G A UCEC 46871117 + 46871097 46871137 41 CGACAGCGTAGTGGTGCATGTGCTGAAGCTGCAGGGTGCCG CGACAGCGTAGTGGTGCATGTACTGAAGCTGCAGGGTGCCG < 41bp 0.527829701600957 0.883797860084974 0.3511346 0.87589264 prediction 0.711936316968034 Functional Gain - FAAH ENSG00000117480 CDS Human protein_coding chr1:46871117 chr1:46871118 synonymous SNV . 0 22 hPsi_associated_SNPs_21017 0 0 0 0 2 Ribosome 0.438732090882545 0.438808586414305 0.75178528 0 hPsi_site_14741 iPseU_CNN:0.75178528;iRNA_PseU:0 14742 chr12 111057695 111057695 1 + G A STAD 111057694 + 111057674 111057714 41 CACAGTGTGACATCAACTGCTGCTGTGATCCCGACTGCAGC CACAGTGTGACATCAACTGCTACTGTGATCCCGACTGCAGC < 41bp 0.45923507292753 0.855962445066645 0.26707652 0.395688 prediction 0.71192489013329 Functional Gain - TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111057694 chr12:111057695 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21018 0 0 1 6 2 chromatin 0.438579949513338 0.437942699197029 0 0 hPsi_site_14742 iPseU_CNN:0;iRNA_PseU:0 14743 chr6 132891742 132891742 1 + G A LUSC 132891741 + 132891721 132891761 41 CTTCAGCATGGTCAGGACGGTGGAGAGCTGCTGGTATTTTG CTTCAGCATGGTCAGGACGGTAGAGAGCTGCTGGTATTTTG < 41bp 0.504826550561616 0.860780845078143 0.2760902 0.8163283 prediction 0.711908589033056 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891741 chr6:132891742 synonymous SNV . 0 22 hPsi_associated_SNPs_21019 0 0 0 0 0 unknown 0.438746035986286 0.438719087521842 0.6326566 0 hPsi_site_14743 iPseU_CNN:0.6326566;iRNA_PseU:0 14744 chr19 30936293 30936293 1 + G A LUAD 30936292 + 30936272 30936312 41 AGAAAGCAGTCGGGATTTTTTGTCACACGGGCTGAACCAGA AGAAAGCAGTCGGGATTTTTTATCACACGGGCTGAACCAGA < 41bp 0.475521453574186 0.855949371070064 0.530111 0.5878409 prediction 0.711898742140128 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936292 chr19:30936293 synonymous SNV . 0 22 hPsi_associated_SNPs_21020 0 0 1 0 0 exosome 0.438718477740855 0.438718894598827 0.1154598 0 hPsi_site_14744 iPseU_CNN:0.1154598;iRNA_PseU:0 14745 chr17 4837819 4837819 1 + G A BLCA 4837818 + 4837798 4837838 41 GGGTCGTGGTCAGGACCTGCTGAGCACAGTGAGCATTAGGT GGGTCGTGGTCAGGACCTGCTAAGCACAGTGAGCATTAGGT < 41bp 0.483055707924339 0.855938735586783 0.20477381 0.2883891 prediction 0.711877471173566 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4837818 chr17:4837819 synonymous SNV . 0 22 hPsi_associated_SNPs_21021 0 0 0 0 0 exosome 0.438673064661321 0.438620678395805 0 0 hPsi_site_14745 iPseU_CNN:0;iRNA_PseU:0 14746 chr2 220414543 220414543 1 + G A BLCA 220414542 + 220414522 220414562 41 GTATGGGTCCCGGGGACCTCTGACAGCCTGCTCAGGCCCCC GTATGGGTCCCGGGGACCTCTAACAGCCTGCTCAGGCCCCC < 41bp 0.51854444475958 0.874481606704459 0.28637645 0.4502222 prediction 0.711874323889758 Functional Gain - TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220414542 chr2:220414543 synonymous SNV . 0 22 hPsi_associated_SNPs_21022 0 0 0 0 0 chromatin 0.438688130578835 0.438718602626435 0 0 hPsi_site_14746 iPseU_CNN:0;iRNA_PseU:0 14747 chr5 150405020 150405020 1 + G A UCS 150405019 + 150404999 150405039 41 ATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGA ATACGTCCTCTTTGTCAACGTAGCCAGCTACTGAGGCCTGA < 41bp 0.471370305089809 0.855935658122477 0.0866549 0.14018887 prediction 0.711871316244954 Functional Gain - GPX3 ENSG00000211445 CDS Human protein_coding chr5:150405019 chr5:150405020 unknown . 0 22 hPsi_associated_SNPs_21023 0 0 1 1 1 Ribosome 0.438718580745645 0.438721503183502 0 0 hPsi_site_14747 iPseU_CNN:0;iRNA_PseU:0 14748 chr1 101704856 101704856 1 + G A LUSC 101704855 + 101704835 101704875 41 ACAGCTAACCTGCTCTTGTCTGGGGCCACCACCTACAAGCT ACAGCTAACCTGCTCTTGTCTAGGGCCACCACCTACAAGCT < 41bp 0.529432559733071 0.88535710009115 0.27417338 0.34654996 prediction 0.711849080716158 Functional Gain - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101704855 chr1:101704856 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_21024 0 0 0 0 0 Endoplasmic reticulum 0.438718988944299 0.438717321463453 0 0 hPsi_site_14748 iPseU_CNN:0;iRNA_PseU:0 14749 chr1 12183367 12183367 1 + G A SKCM 12183366 + 12183346 12183386 41 GCTGAGAAGGACACCACCTTTGAGGCGCCACCCCTGGGGAC GCTGAGAAGGACACCACCTTTAAGGCGCCACCCCTGGGGAC < 41bp 0.461889209324523 0.855923664362716 0.6759062 0.81246877 prediction 0.711847328725432 Functional Gain - TNFRSF8 ENSG00000120949 CDS Human protein_coding chr1:12183366 chr1:12183367 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21025 0 0 0 0 2 Endoplasmic reticulum 0.438718593061141 0.438718613687189 0.27312514 0 hPsi_site_14749 iPseU_CNN:0.27312514;iRNA_PseU:0 14750 chr1 17586167 17586167 1 + G A rs548507629 17586166 + 17586146 17586186 41 ATGGAGAGGGGCCGGGAGCGTGCAGACACCAGGCGGTGGCG ATGGAGAGGGGCCGGGAGCGTACAGACACCAGGCGGTGGCG < 41bp 0.530395751382343 0.886313684441462 0.382469 0.8040694 prediction 0.711835866118238 Functional Gain - PADI3 ENSG00000142619 CDS Human protein_coding chr1:17586166 chr1:17586167 nonsynonymous SNV 0.163 1 22 hPsi_associated_SNPs_21026 0 0 0 0 2 unknown 0.438718593226424 0.438718591271919 0.6081388 0 hPsi_site_14750 iPseU_CNN:0.6081388;iRNA_PseU:0 14751 chr16 630881 630881 1 + G A UCEC 630880 + 630860 630900 41 CCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGC CCGGCTCCTGGTGGTCGCCGTACAGGGCCTGATCCATCTGC < 41bp 0.465702836326574 0.855916552079065 0.6005467 0.8613106 prediction 0.711833104158131 Functional Gain - PIGQ ENSG00000007541 CDS Human protein_coding chr16:630880 chr16:630881 synonymous SNV . 0 22 hPsi_associated_SNPs_21027 0 0 1 0 2 Ribosome 0.4386645645301 0.438691034474657 0.5215278 0 hPsi_site_14751 iPseU_CNN:0.5215278;iRNA_PseU:0 14752 chrX 115303742 115303742 1 + G A SKCM 115303741 + 115303721 115303761 41 TTGTCGTGGTTACACTGTTTTGTTGTCAAAAGGGTCCTAAA TTGTCGTGGTTACACTGTTTTATTGTCAAAAGGGTCCTAAA < 41bp 0.504303614533744 0.860218713849109 0.43773407 0.54837 prediction 0.71183019863073 Functional Gain - AGTR2 ENSG00000180772 CDS Human protein_coding chrX:115303741 chrX:115303742 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21028 0 0 0 0 0 unknown 0.438899586331967 0.438708907670924 0.09674 0 hPsi_site_14752 iPseU_CNN:0.09674;iRNA_PseU:0 14753 chr19 15852413 15852413 1 + G A PRAD 15852412 + 15852392 15852432 41 TTGTGTGCCCTCTCCATCTCTGAGATTCTGTTCACTGTTGC TTGTGTGCCCTCTCCATCTCTAAGATTCTGTTCACTGTTGC < 41bp 0.494511935299852 0.855908678166388 0.31077766 0.440144 prediction 0.711817356332777 Functional Gain - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852412 chr19:15852413 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_21029 0 0 0 0 0 unknown 0.4388356417826 0.439074402245756 0 0 hPsi_site_14753 iPseU_CNN:0;iRNA_PseU:0 14754 chr11 66026191 66026191 1 + G A rs11825510 66026190 + 66026170 66026210 41 TCGTGCCCTGCTGGCTCCTCTGGTTGCACCTGAGGCCGGCG TCGTGCCCTGCTGGCTCCTCTAGTTGCACCTGAGGCCGGCG < 41bp 0.48643413598111 0.855905522597915 0.24781898 0.4601487 prediction 0.711811045195829 Functional Gain - KLC2 ENSG00000174996 CDS Human protein_coding chr11:66026190 chr11:66026191 synonymous SNV . 0 22 hPsi_associated_SNPs_21030 0 0 1 0 0 Ribosome 0.438718065061743 0.438718739105896 0 0 hPsi_site_14754 iPseU_CNN:0;iRNA_PseU:0 14755 chr1 16375656 16375656 1 + G A STAD 16375655 + 16375635 16375675 41 GTCATGTCTTCCCACTTCTCTGTCTGGGATTACTGGAGGGG GTCATGTCTTCCCACTTCTCTATCTGGGATTACTGGAGGGG < 41bp 0.470368630387276 0.855894118014464 0.24825576 0.52775913 prediction 0.711788236028928 Functional Gain - CLCNKB ENSG00000184908 CDS Human protein_coding chr1:16375655 chr1:16375656 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_21031 0 0 0 0 1 exosome 0.438932325428977 0.438736493840664 0.0555182599999999 0 hPsi_site_14755 iPseU_CNN:0.0555182599999999;iRNA_PseU:0 14756 chr6 43266249 43266249 1 + G A KIRP 43266248 + 43266228 43266268 41 GCCTGCCCACCGATGTGCCCTGCCGGGTGCCCCTGCCAACT GCCTGCCCACCGATGTGCCCTACCGGGTGCCCCTGCCAACT < 41bp 0.480503637841142 0.855889836248937 0.20874107 0.33880842 prediction 0.711779672497873 Functional Gain - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43266248 chr6:43266249 synonymous SNV . 0 22 hPsi_associated_SNPs_21032 0 0 0 0 0 cytosol 0.438718495813491 0.438717158889531 0 0 hPsi_site_14756 iPseU_CNN:0;iRNA_PseU:0 14757 chr6 139101044 139101044 1 + G A LIHC 139101043 + 139101023 139101063 41 CAGCACTCCTTCCTCACTGATGTCTCAGATGTTCAGGAGAT CAGCACTCCTTCCTCACTGATATCTCAGATGTTCAGGAGAT < 41bp 0.529673121326742 0.885553389311655 0.23756447 0.39640144 prediction 0.711760535969825 Functional Gain - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139101043 chr6:139101044 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21033 0 0 0 0 1 Ribosome 0.438717228972483 0.438715012034514 0 0 hPsi_site_14757 iPseU_CNN:0;iRNA_PseU:0 14758 chr8 145730020 145730020 1 + G A rs201783570 145730019 + 145729999 145730039 41 CCTTTCACCGAGGTCATCCGTGCCAACATCGGGGACGCACA CCTTTCACCGAGGTCATCCGTACCAACATCGGGGACGCACA < 41bp 0.519836148297892 0.875715050734583 0.3425865 0.6997422 prediction 0.711757804873382 Functional Gain - GPT ENSG00000167701 CDS Human protein_coding chr8:145730019 chr8:145730020 nonsynonymous SNV 0.984 3 22 hPsi_associated_SNPs_21034 0 0 0 0 1 Cytosol 0.43908452519141 0.439291411391237 0.3994844 0 hPsi_site_14758 iPseU_CNN:0.3994844;iRNA_PseU:0 14759 chr16 3406446 3406446 1 + G A rs62000973 3406445 + 3406425 3406465 41 TCACTCTGCAGCTCCCATTGTGTGGGCACCGGAGGGTGGAG TCACTCTGCAGCTCCCATTGTATGGGCACCGGAGGGTGGAG < 41bp 0.476493529357983 0.855871263176222 0.27687883 0.32501772 prediction 0.711742526352444 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406445 chr16:3406446 nonsynonymous SNV 0.970 3 22 hPsi_associated_SNPs_21035 0 0 0 0 0 unknown 0.493756518870235 0.459403889301513 0 0 hPsi_site_14759 iPseU_CNN:0;iRNA_PseU:0 14760 chr5 147261610 147261610 1 + G A rs34212847 147261609 + 147261589 147261629 41 GGAGGCGCTATCACACTTGGTGTGACATCAAGATAAAGAGC GGAGGCGCTATCACACTTGGTATGACATCAAGATAAAGAGC < 41bp 0.507453790345301 0.863322676795026 0.19975924 0.43316674 prediction 0.711737772899451 Functional Gain - SCGB3A2 ENSG00000164265 CDS Human protein_coding chr5:147261609 chr5:147261610 synonymous SNV . 0 22 hPsi_associated_SNPs_21036 0 0 0 0 1 exosome 0.438658522721657 0.438718820870714 0 0 hPsi_site_14760 iPseU_CNN:0;iRNA_PseU:0 14761 chr19 15224468 15224468 1 + G A HNSC 15224467 + 15224447 15224487 41 GCTGGCAGACCCCGAAGTGGTGACTCGGCCCCGCGGTCGAG GCTGGCAGACCCCGAAGTGGTAACTCGGCCCCGCGGTCGAG < 41bp 0.473295750124873 0.855861545608208 0.32681406 0.8475306 prediction 0.711723091216417 Functional Gain - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15224467 chr19:15224468 synonymous SNV . 0 22 hPsi_associated_SNPs_21037 0 0 1 0 1 exosome 0.438809417257746 0.437786432710011 0.6950612 0 hPsi_site_14761 iPseU_CNN:0.6950612;iRNA_PseU:0 14762 chr1 233514835 233514835 1 + G A UCEC 233514834 + 233514814 233514854 41 AGCTGGGAGGAGGCAGCCTCTGCGAATGCTGCCACAGTCTC AGCTGGGAGGAGGCAGCCTCTACGAATGCTGCCACAGTCTC < 41bp 0.464115095313205 0.855860174856801 0.5615735 0.63949955 prediction 0.711720349713602 Functional Gain - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514834 chr1:233514835 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21038 0 0 1 0 0 unknown 0.438696709440587 0.438746965861493 0.1558521 0 hPsi_site_14762 iPseU_CNN:0.1558521;iRNA_PseU:0 14763 chr6 2785330 2785330 1 + G A BRCA 2785329 + 2785309 2785349 41 CAACAACGTCAAAGCCTGCCTGAGGAACCACCAGGGGCCAC CAACAACGTCAAAGCCTGCCTAAGGAACCACCAGGGGCCAC < 41bp 0.477959270444728 0.855856542005256 0.32580256 0.36454314 prediction 0.711713084010512 Functional Gain - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2785329 chr6:2785330 synonymous SNV . 0 22 hPsi_associated_SNPs_21039 0 0 1 0 1 Ribosome 0.438720062696708 0.438718592994105 0 0 hPsi_site_14763 iPseU_CNN:0;iRNA_PseU:0 14764 chr8 145749504 145749504 1 + C T LUAD 145749505 - 145749485 145749525 41 CCTGGCCAGTCTGCAAGTCCTGCGCCTCACAGGTACCTCTT CCTGGCCAGTCTGCAAGTCCTACGCCTCACAGGTACCTCTT < 41bp 0.484793616617696 0.85584989446227 0.2843904 0.6580992 prediction 0.71169978892454 Functional Gain - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145749505 chr8:145749504 synonymous SNV . 0 22 hPsi_associated_SNPs_21040 0 0 1 0 1 chromatin 0.438718592489727 0.438717930568802 0.3161984 0 hPsi_site_14764 iPseU_CNN:0.3161984;iRNA_PseU:0 14765 chr6 348179 348179 1 + G A UCEC 348178 + 348158 348198 41 ACTGACTTTGGCTGGGAGGATGCCCTGCACACCGTGCGTGC ACTGACTTTGGCTGGGAGGATACCCTGCACACCGTGCGTGC < 41bp 0.532307337473366 0.888146099335702 0.23201829 0.58630085 prediction 0.711677523724672 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348178 chr6:348179 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_21041 0 0 1 0 2 Ribosome 0.435758381076443 0.436200145287405 0.1726017 0 hPsi_site_14765 iPseU_CNN:0.1726017;iRNA_PseU:0 14766 chr11 4470744 4470744 1 + G A SKCM 4470743 + 4470723 4470763 41 CAGGCTGATGCAGCCCTCCATGAACCCATGTACCTCTTTCT CAGGCTGATGCAGCCCTCCATAAACCCATGTACCTCTTTCT < 41bp 0.511170077318664 0.867004600089805 0.21792194 0.2596448 prediction 0.711669045542282 Functional Gain - OR52K2 ENSG00000181963 CDS Human protein_coding chr11:4470743 chr11:4470744 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_21042 0 0 0 0 0 exosome 0.43921223844754 0.438770531389038 0 0 hPsi_site_14766 iPseU_CNN:0;iRNA_PseU:0 14767 chr18 76754586 76754586 1 + G A SKCM 76754585 + 76754565 76754605 41 GCTGACCGGCCTCAAGTCCGTGGAGAACGGGTCCGGGGAGA GCTGACCGGCCTCAAGTCCGTAGAGAACGGGTCCGGGGAGA < 41bp 0.526383236549495 0.882216909475224 0.35126665 0.66061914 prediction 0.711667345851459 Functional Gain - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76754585 chr18:76754586 synonymous SNV . 0 22 hPsi_associated_SNPs_21043 0 0 0 0 0 exosome 0.438718605107183 0.438718252156354 0.32123828 0 hPsi_site_14767 iPseU_CNN:0.32123828;iRNA_PseU:0 14768 chr1 12853430 12853430 1 + G A SKCM 12853429 + 12853409 12853449 41 GCTGGCAGGGCAGAGCCTGCTGAGAGACCAGGCCTTGTCCA GCTGGCAGGGCAGAGCCTGCTAAGAGACCAGGCCTTGTCCA < 41bp 0.479102436056888 0.855781193576011 0.3183621 0.39548928 prediction 0.711562387152022 Functional Gain - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12853429 chr1:12853430 synonymous SNV . 0 22 hPsi_associated_SNPs_21044 0 0 0 0 1 unknown 0.438713090136263 0.442290098704969 0 0 hPsi_site_14768 iPseU_CNN:0;iRNA_PseU:0 14769 chr11 837554 837554 1 + G A LUSC 837553 + 837533 837573 41 GCCGTGTGGTCCCAGACAGCTGCTGCAAGACGGTGGTGGCT GCCGTGTGGTCCCAGACAGCTACTGCAAGACGGTGGTGGCT < 41bp 0.452971182752229 0.855777160379947 0.21274242 0.4759451 prediction 0.711554320759893 Functional Gain - CD151 ENSG00000177697 CDS Human protein_coding chr11:837553 chr11:837554 nonsynonymous SNV 0.800 5 22 hPsi_associated_SNPs_21045 0 0 1 1 2 Ribosome 0.438726357309492 0.439043089657109 0 0 hPsi_site_14769 iPseU_CNN:0;iRNA_PseU:0 14770 chr4 188924735 188924735 1 + G A rs113438441 188924734 + 188924714 188924754 41 GTGCGGAAAGCGCTTCTCTCTGGACTTTAATTTGCGTACGC GTGCGGAAAGCGCTTCTCTCTAGACTTTAATTTGCGTACGC < 41bp 0.469519502994075 0.855767496356317 0.25032353 0.36457244 prediction 0.711534992712634 Functional Gain - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924734 chr4:188924735 synonymous SNV . 0 22 hPsi_associated_SNPs_21046 0 0 0 0 0 Nucleus 0.438742055764561 0.438719531865417 0 0 hPsi_site_14770 iPseU_CNN:0;iRNA_PseU:0 14771 chr10 64565423 64565423 1 + G A CESC 64565422 + 64565402 64565442 41 ATCGACGCCGTGGAAGGGCCTGCCGCCTTCCTGGACATCCT ATCGACGCCGTGGAAGGGCCTACCGCCTTCCTGGACATCCT < 41bp 0.514848680061349 0.870609297919724 0.29163086 0.5573987 prediction 0.71152123571675 Functional Gain - ADO ENSG00000181915 CDS Human protein_coding chr10:64565422 chr10:64565423 nonsynonymous SNV 0.962 0 22 hPsi_associated_SNPs_21047 0 0 1 0 0 exosome 0.438714693554503 0.438732178618229 0.1147974 0 hPsi_site_14771 iPseU_CNN:0.1147974;iRNA_PseU:0 14772 chr1 6488376 6488376 1 + G A SKCM 6488375 + 6488355 6488395 41 TGGCTCTTGCATCATGGCGGTGGGGACCCCACCGCGGCCAC TGGCTCTTGCATCATGGCGGTAGGGACCCCACCGCGGCCAC < 41bp 0.525187742215847 0.880945677943324 0.22776678 0.52566534 prediction 0.711515871454953 Functional Gain - ESPN ENSG00000187017 CDS Human protein_coding chr1:6488375 chr1:6488376 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_21048 0 0 1 0 1 Ribosome 0.438719213306245 0.438718593742603 0.05133068 0 hPsi_site_14772 iPseU_CNN:0.05133068;iRNA_PseU:0 14773 chr11 65123582 65123582 1 + G A CHOL 65123581 + 65123561 65123601 41 CTGGGACGTGACGGGGCCCATGCTGCTCCACAAAGCCAAGG CTGGGACGTGACGGGGCCCATACTGCTCCACAAAGCCAAGG < 41bp 0.521105191024397 0.876861983522841 0.324638 0.42093852 prediction 0.711513584996887 Functional Gain - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123581 chr11:65123582 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_21049 0 0 1 0 0 Endoplasmic reticulum 0.438718592969086 0.438718592978862 0 0 hPsi_site_14773 iPseU_CNN:0;iRNA_PseU:0 14774 chr16 4492299 4492299 1 + G A STAD 4492298 + 4492278 4492318 41 GAGTTGACATTCAATCAAGCTGCAAAGGGGGTCAACAAGGA GAGTTGACATTCAATCAAGCTACAAAGGGGGTCAACAAGGA < 41bp 0.533487950623254 0.889239324506228 0.19982246 0.29021013 prediction 0.711502747765949 Functional Gain - DNAJA3 ENSG00000103423 CDS Human protein_coding chr16:4492298 chr16:4492299 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_21050 0 0 1 0 1 Ribosome 0.438699270377934 0.438723691962256 0 0 hPsi_site_14774 iPseU_CNN:0;iRNA_PseU:0 14775 chr8 23106821 23106821 1 + G A GBM 23106820 + 23106800 23106840 41 TCCTGCTGAAGCCTCTCAAGTGGACTCTTTCTAACATGCTG TCCTGCTGAAGCCTCTCAAGTAGACTCTTTCTAACATGCTG < 41bp 0.461000376698641 0.855749861824351 0.26329693 0.49512577 prediction 0.711499723648702 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23106820 chr8:23106821 stopgain 1.000 1 22 hPsi_associated_SNPs_21051 0 0 1 0 2 Ribosome 0.438162323409747 0.438915808753056 0 0 hPsi_site_14775 iPseU_CNN:0;iRNA_PseU:0 14776 chr11 48346996 48346996 1 + G A rs12794960 48346995 + 48346975 48347015 41 GACCAGGCATCTCTGTGCCATGCTTGTAGGGGTGGCTTGGC GACCAGGCATCTCTGTGCCATACTTGTAGGGGTGGCTTGGC < 41bp 0.483969357830158 0.855741229600347 0.23134214 0.38304782 prediction 0.711482459200694 Functional Gain - OR4C3 ENSG00000176547 CDS Human protein_coding chr11:48346995 chr11:48346996 nonsynonymous SNV 0.028 0 22 hPsi_associated_SNPs_21052 0 0 0 0 0 exosome 0.438719230662248 0.438714461374101 0 0 hPsi_site_14776 iPseU_CNN:0;iRNA_PseU:0 14777 chr19 51986440 51986440 1 + G A SKCM 51986439 + 51986419 51986459 41 GAACTTCTCAGATGCAAAGATGAACCTCTCGAGTCTTGCCT GAACTTCTCAGATGCAAAGATAAACCTCTCGAGTCTTGCCT < 41bp 0.521662189294167 0.877394052038156 0.2528435 0.29618204 prediction 0.711463725487979 Functional Gain - CEACAM18 ENSG00000213822 CDS Human protein_coding chr19:51986439 chr19:51986440 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21053 0 0 0 0 0 unknown 0.43819122987282 0.438900658703906 0 0 hPsi_site_14777 iPseU_CNN:0;iRNA_PseU:0 14778 chr1 226027718 226027718 1 + G A UCEC 226027717 + 226027697 226027737 41 GCGGCTACATGCACATCCAGTGCACCAAGCCTGACACCGTA GCGGCTACATGCACATCCAGTACACCAAGCCTGACACCGTA < 41bp 0.532593769892612 0.888324284285783 0.21636036 0.57383174 prediction 0.711461028786343 Functional Gain - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027717 chr1:226027718 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_21054 0 0 1 0 1 Endoplasmic reticulum 0.438714540367823 0.438717687011117 0.14766348 0 hPsi_site_14778 iPseU_CNN:0.14766348;iRNA_PseU:0 14779 chr2 238732999 238732999 1 + G A rs141382362 238732998 + 238732978 238733018 41 AAAGAGAGCCTGACAGGAGTTGACGTCTCAGGGACACAGGG AAAGAGAGCCTGACAGGAGTTAACGTCTCAGGGACACAGGG < 41bp 0.505742343444366 0.861469340059226 0.29960725 0.7239096 prediction 0.711453993229719 Functional Gain - RBM44 ENSG00000177483 CDS Human protein_coding chr2:238732998 chr2:238732999 nonsynonymous SNV 0.455 2 22 hPsi_associated_SNPs_21055 0 0 0 0 2 exosome 0.438716412260997 0.438718403669501 0.4478192 0 hPsi_site_14779 iPseU_CNN:0.4478192;iRNA_PseU:0 14780 chr5 76173610 76173610 1 + G A UCEC 76173609 + 76173589 76173629 41 ATGGTGGCAGCTCTGACAGTTGCTTGTAATGATTACTTTGT ATGGTGGCAGCTCTGACAGTTACTTGTAATGATTACTTTGT < 41bp 0.486861971514032 0.855720391367805 0.117305934 0.29618844 prediction 0.71144078273561 Functional Gain - S100Z ENSG00000171643 CDS Human protein_coding chr5:76173609 chr5:76173610 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21056 0 0 0 0 1 exosome 0.425977209968323 0.435613221316427 0 0 hPsi_site_14780 iPseU_CNN:0;iRNA_PseU:0 14781 chrX 118604894 118604894 1 + G A UCEC 118604893 + 118604873 118604913 41 TGTACACAGGCACGCTTGACTGCTGGCGGAAGATTGCTCGT TGTACACAGGCACGCTTGACTACTGGCGGAAGATTGCTCGT < 41bp 0.486552670210512 0.855714892844814 0.20499969 0.32741597 prediction 0.711429785689628 Functional Gain - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118604893 chrX:118604894 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21057 0 0 1 0 1 Cytosol 0.438715925895543 0.438718463565106 0 0 hPsi_site_14781 iPseU_CNN:0;iRNA_PseU:0 14782 chr11 68181335 68181335 1 + G A COAD 68181334 + 68181314 68181354 41 CTTCGTGATGGACATCCTGGTGTTCCACTCCTCCCGCCAGG CTTCGTGATGGACATCCTGGTATTCCACTCCTCCCGCCAGG < 41bp 0.520070621727376 0.875779789318243 0.3369929 0.7473792 prediction 0.711418335181734 Functional Gain - LRP5 ENSG00000162337 CDS Human protein_coding chr11:68181334 chr11:68181335 synonymous SNV . 0 22 hPsi_associated_SNPs_21058 0 0 1 0 0 Endoplasmic reticulum 0.438718580882733 0.438718670026784 0.4947584 0 hPsi_site_14782 iPseU_CNN:0.4947584;iRNA_PseU:0 14783 chrX 75650684 75650684 1 + G A HNSC 75650683 + 75650663 75650703 41 CAAAGTGTTCCCTGACCTCCTGAATCGTGCTGCCCGCACCC CAAAGTGTTCCCTGACCTCCTAAATCGTGCTGCCCGCACCC < 41bp 0.48090234807167 0.855708238650533 0.17979753 0.28011355 prediction 0.711416477301066 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75650683 chrX:75650684 synonymous SNV . 0 22 hPsi_associated_SNPs_21059 0 0 0 0 0 membrane 0.438768891096077 0.438719824924394 0 0 hPsi_site_14783 iPseU_CNN:0;iRNA_PseU:0 14784 chr15 77227977 77227977 1 + G A LUAD 77227976 + 77227956 77227996 41 GATGATACTGTGACTTGGGATGAATATAACATTCAGATGTA GATGATACTGTGACTTGGGATAAATATAACATTCAGATGTA < 41bp 0.482112721288963 0.855700947251818 0.2869437 0.35924387 prediction 0.711401894503637 Functional Gain - RCN2 ENSG00000117906 CDS Human protein_coding chr15:77227976 chr15:77227977 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_21060 0 0 1 0 1 Ribosome 0.438714614466831 0.438718047895615 0 0 hPsi_site_14784 iPseU_CNN:0;iRNA_PseU:0 14785 chr20 37168467 37168467 1 + G A PRAD 37168466 + 37168446 37168486 41 CGGAAGCGAGCCATCAGTTCTGTGTGCACCTACATTGTTTA CGGAAGCGAGCCATCAGTTCTATGTGCACCTACATTGTTTA < 41bp 0.469962896170705 0.855687806658649 0.3268389 0.384513 prediction 0.711375613317298 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37168466 chr20:37168467 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_21061 0 0 1 0 1 Nucleus 0.438820599406578 0.438787861899893 0 0 hPsi_site_14785 iPseU_CNN:0;iRNA_PseU:0 14786 chr21 37783763 37783763 1 + G A UCEC 37783762 + 37783742 37783782 41 CTCTGTCCCCAACCCCCAGGTGTGGAGCTGATGAGTCTGCC CTCTGTCCCCAACCCCCAGGTATGGAGCTGATGAGTCTGCC < 41bp 0.462358053679709 0.855687186620799 0.23925152 0.27962607 prediction 0.711374373241598 Functional Gain - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37783762 chr21:37783763 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21062 0 0 1 0 1 Ribosome 0.438718592995101 0.438718592994819 0 0 hPsi_site_14786 iPseU_CNN:0;iRNA_PseU:0 14787 chr11 102239204 102239204 1 + G A LGG 102239203 + 102239183 102239223 41 TATAAAACAGTTAATGATATTGTGTCAGCACTTCTTAATGC TATAAAACAGTTAATGATATTATGTCAGCACTTCTTAATGC < 41bp 0.486803133112697 0.855677305412195 0.2558065 0.29651216 prediction 0.711354610824391 Functional Gain - BIRC2 ENSG00000110330 CDS Human protein_coding chr11:102239203 chr11:102239204 nonsynonymous SNV 0.969 2 22 hPsi_associated_SNPs_21063 0 0 1 0 1 Cytosol 0.437814149821145 0.438956650032377 0 0 hPsi_site_14787 iPseU_CNN:0;iRNA_PseU:0 14788 chr7 99054374 99054374 1 + G A rs45469095 99054373 + 99054353 99054393 41 GGGCATCGATGCCTCCTTTCTGGGACTCCCGGCACAACTCC GGGCATCGATGCCTCCTTTCTAGGACTCCCGGCACAACTCC < 41bp 0.490669744652947 0.855663722970489 0.25274122 0.45162767 prediction 0.711327445940978 Functional Gain - CPSF4 ENSG00000160917 UTR3 Human protein_coding chr7:99054373 chr7:99054374 . . 0 22 hPsi_associated_SNPs_21064 0 0 1 0 0 chromatin 0.438718547229012 0.43871628111354 0 0 hPsi_site_14788 iPseU_CNN:0;iRNA_PseU:0 14789 chr22 37329918 37329918 1 + G A UCEC 37329917 + 37329897 37329937 41 GAACGCCCACAGCATGGCCCTGCCAGCCCTGGAGCCCTCCA GAACGCCCACAGCATGGCCCTACCAGCCCTGGAGCCCTCCA < 41bp 0.539237816405684 0.894900160142826 0.2522946 0.4639685 prediction 0.711324687474285 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37329917 chr22:37329918 synonymous SNV . 0 22 hPsi_associated_SNPs_21065 0 0 0 0 1 Endoplasmic reticulum 0.438726843237206 0.440552539225602 0 0 hPsi_site_14789 iPseU_CNN:0;iRNA_PseU:0 14790 chr19 49100097 49100097 1 + G A CESC 49100096 + 49100076 49100116 41 ACACTCAACCTTCAGCGCCATGAAGGCCAACACCATGTCCA ACACTCAACCTTCAGCGCCATAAAGGCCAACACCATGTCCA < 41bp 0.461731254036168 0.855661327922784 0.29320025 0.4556458 prediction 0.711322655845568 Functional Gain - SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49100096 chr19:49100097 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_21066 0 0 0 0 1 exosome 0.438316124179105 0.435542082081289 0 0 hPsi_site_14790 iPseU_CNN:0;iRNA_PseU:0 14791 chr15 68583191 68583191 1 + G A LUAD 68583190 + 68583170 68583210 41 GTCAATTCCAATACTCCAGTTGATGATTTCCACACCAATGA GTCAATTCCAATACTCCAGTTAATGATTTCCACACCAATGA < 41bp 0.51748324402493 0.873141358606116 0.13718721 0.2670008 prediction 0.711316229162372 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583190 chr15:68583191 nonsynonymous SNV 0.811 4 22 hPsi_associated_SNPs_21067 0 0 1 0 0 Ribosome 0.460538742788776 0.438510640201134 0 0 hPsi_site_14791 iPseU_CNN:0;iRNA_PseU:0 14792 chr5 78416233 78416233 1 + G A COAD 78416232 + 78416212 78416252 41 CAAGTGGCTGATGAAGGAGATGCTTTGGTAGCAGGAGGAGT CAAGTGGCTGATGAAGGAGATACTTTGGTAGCAGGAGGAGT < 41bp 0.467574355256675 0.85565514764397 0.23961484 0.29440042 prediction 0.71131029528794 Functional Gain - BHMT ENSG00000145692 CDS Human protein_coding chr5:78416232 chr5:78416233 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_21068 0 0 0 0 1 exosome 0.437401880508103 0.438552967214165 0 0 hPsi_site_14792 iPseU_CNN:0;iRNA_PseU:0 14793 chr18 72234573 72234573 1 + G A CESC 72234572 + 72234552 72234592 41 AAGGACCGATTCTTCTCTGGTGTGGACTACATTGTAATTTC AAGGACCGATTCTTCTCTGGTATGGACTACATTGTAATTTC < 41bp 0.531898419507402 0.887549794740695 0.31669095 0.44950622 prediction 0.711302750466587 Functional Gain - CNDP1 ENSG00000150656 CDS Human protein_coding chr18:72234572 chr18:72234573 nonsynonymous SNV 0.808 4 22 hPsi_associated_SNPs_21069 0 0 0 0 1 exosome 0.438718529277296 0.438718502218615 0 0 hPsi_site_14793 iPseU_CNN:0;iRNA_PseU:0 14794 chrX 13727290 13727290 1 + G A LIHC 13727289 + 13727269 13727309 41 CAGAAGAAGCCCAAGCTTGGTGCAGGGACAACGGCGACTAT CAGAAGAAGCCCAAGCTTGGTACAGGGACAACGGCGACTAT < 41bp 0.522911791458721 0.878547764873021 0.2865603 0.6753454 prediction 0.7112719468286 Functional Gain - RAB9A ENSG00000123595 CDS Human protein_coding chrX:13727289 chrX:13727290 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21070 0 0 1 0 0 Ribosome 0.438718593093899 0.438718585790912 0.3506908 0 hPsi_site_14794 iPseU_CNN:0.3506908;iRNA_PseU:0 14795 chr22 38259338 38259338 1 + G A CESC 38259337 + 38259317 38259357 41 TGGCTCTGGGATATTATCGATGAGTTCATCTACCAGGTATC TGGCTCTGGGATATTATCGATAAGTTCATCTACCAGGTATC < 41bp 0.468207306631792 0.855625240682555 0.5653289 0.7656569 prediction 0.711250481365109 Functional Gain - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38259337 chr22:38259338 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_21071 0 0 1 0 2 Cytosol 0.438696298830829 0.438737374468161 0.400656 0 hPsi_site_14795 iPseU_CNN:0.400656;iRNA_PseU:0 14796 chr19 48832637 48832637 1 + G A rs535964111 48832636 + 48832616 48832656 41 GAAGGCGGTGCAGGTCCTCATGGTGCTCTCCCTCATTCTCT GAAGGCGGTGCAGGTCCTCATAGTGCTCTCCCTCATTCTCT < 41bp 0.458221264003923 0.855625021046277 0.1762909 0.34232146 prediction 0.711250042092554 Functional Gain - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48832636 chr19:48832637 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21072 0 0 1 0 1 Endoplasmic reticulum 0.438718592632762 0.438718037812577 0 0 hPsi_site_14796 iPseU_CNN:0;iRNA_PseU:0 14797 chr12 121013464 121013464 1 + G A UCEC 121013463 + 121013443 121013483 41 GTTGGAAAAGCAAAAGCAGATGTGTGGCCCAAAACTGCTCC GTTGGAAAAGCAAAAGCAGATATGTGGCCCAAAACTGCTCC < 41bp 0.524396640140506 0.880008027299851 0.37585953 0.52148795 prediction 0.711222774318691 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121013463 chr12:121013464 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_21073 0 0 1 0 2 Ribosome 0.438714851890259 0.43871742637848 0.0429759000000001 0 hPsi_site_14797 iPseU_CNN:0.0429759000000001;iRNA_PseU:0 14798 chr11 63987457 63987457 1 + G A SKCM 63987456 + 63987436 63987476 41 AAGAGCCAGGACGAGGCCCCTGGGGACCCCATTCAGCAGCT AAGAGCCAGGACGAGGCCCCTAGGGACCCCATTCAGCAGCT < 41bp 0.460294364987499 0.855606858230299 0.16069281 0.22963762 prediction 0.711213716460597 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987456 chr11:63987457 nonsynonymous SNV 0.559 4 22 hPsi_associated_SNPs_21074 0 0 1 0 1 Cytosol 0.438718592995102 0.438718591866062 0 0 hPsi_site_14798 iPseU_CNN:0;iRNA_PseU:0 14799 chr18 22020498 22020498 1 + G A HNSC 22020497 + 22020477 22020517 41 AAAACTGAAGAGGAAGATGTTGAATGTGAAGATGATCTCAT AAAACTGAAGAGGAAGATGTTAAATGTGAAGATGATCTCAT < 41bp 0.467442231303076 0.855598591184597 0.35115826 0.3786988 prediction 0.711197182369194 Functional Gain - IMPACT ENSG00000154059 CDS Human protein_coding chr18:22020497 chr18:22020498 nonsynonymous SNV 0.921 0 22 hPsi_associated_SNPs_21075 0 0 1 0 2 Ribosome 0.438720104536643 0.438716650641046 0 0 hPsi_site_14799 iPseU_CNN:0;iRNA_PseU:0 14800 chrX 128926360 128926360 1 + G A UCEC 128926359 + 128926339 128926379 41 AGCTTCGGGGAGGAACCACCTGCCCCCCAGTACACAGGGCC AGCTTCGGGGAGGAACCACCTACCCCCCAGTACACAGGGCC < 41bp 0.448716129137507 0.855595996159238 0.2882704 0.5415632 prediction 0.711191992318476 Functional Gain - SASH3 ENSG00000122122 CDS Human protein_coding chrX:128926359 chrX:128926360 nonsynonymous SNV 0.042 0 22 hPsi_associated_SNPs_21076 0 0 0 0 2 exosome 0.438717485318438 0.438719177277234 0.0831264 0 hPsi_site_14800 iPseU_CNN:0.0831264;iRNA_PseU:0 14801 chr11 71249442 71249442 1 + G A UCEC 71249441 + 71249421 71249461 41 CCAGCTGCTGCAAACCCTGCTGTTCCCAGTCCAGCTGTTGT CCAGCTGCTGCAAACCCTGCTATTCCCAGTCCAGCTGTTGT < 41bp 0.489342331066015 0.855593342040607 0.21596882 0.47728568 prediction 0.711186684081214 Functional Gain - KRTAP5-8 ENSG00000241233 CDS Human protein_coding chr11:71249441 chr11:71249442 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_21077 0 0 0 0 0 unknown 0.438718134006852 0.438718587179706 0 0 hPsi_site_14801 iPseU_CNN:0;iRNA_PseU:0 14802 chr17 79202912 79202912 1 + C T SKCM 79202913 - 79202893 79202933 41 GAGGCCCCAGCAGCTGTGCGTGGAGCCGCGACTCCTTGTTT GAGGCCCCAGCAGCTGTGCGTAGAGCCGCGACTCCTTGTTT < 41bp 0.495744926569607 0.855588175943064 0.23077255 0.67050445 prediction 0.711176351886128 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79202913 chr17:79202912 stopgain 0.000 0 22 hPsi_associated_SNPs_21078 0 0 0 0 0 chromatin 0.438718592995882 0.438718591160101 0.3410089 0 hPsi_site_14802 iPseU_CNN:0.3410089;iRNA_PseU:0 14803 chr11 66191622 66191622 1 + G A OV 66191621 + 66191601 66191641 41 GCAGAACTAAGCAAGGATCTTGTGTGCACTCCACCTTACAC GCAGAACTAAGCAAGGATCTTATGTGCACTCCACCTTACAC < 41bp 0.524128437136207 0.879704403464298 0.2511854 0.60392845 prediction 0.711151932656183 Functional Gain - NPAS4 ENSG00000174576 CDS Human protein_coding chr11:66191621 chr11:66191622 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_21079 0 0 0 0 0 unknown 0.438713574009427 0.438718538359521 0.2078569 0 hPsi_site_14803 iPseU_CNN:0.2078569;iRNA_PseU:0 14804 chr19 44352666 44352666 1 + G A rs1061769 44352665 + 44352645 44352685 41 AATTCGGGAAGACCTTTACTTGTGGCTCAAAACTTGTTCAT AATTCGGGAAGACCTTTACTTATGGCTCAAAACTTGTTCAT < 41bp 0.510697452297093 0.866273231752445 0.6847364 0.8915211 prediction 0.711151558910705 Functional Gain - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352665 chr19:44352666 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21080 0 0 1 0 0 Nucleus 0.438699500411819 0.438718542047626 0.4135694 0 hPsi_site_14804 iPseU_CNN:0.4135694;iRNA_PseU:0 14805 chr17 7329726 7329726 1 + G A UCEC 7329725 + 7329705 7329745 41 GCCGTTGTCGCCGTCGCTGCTGCAACCACCAGCAGCGGCCG GCCGTTGTCGCCGTCGCTGCTACAACCACCAGCAGCGGCCG < 41bp 0.516933671163739 0.872503982944776 0.33025214 0.6356288 prediction 0.711140623562074 Functional Gain - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329725 chr17:7329726 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_21081 0 0 0 0 0 exosome 0.43810166590095 0.438382734532971 0.2712576 0 hPsi_site_14805 iPseU_CNN:0.2712576;iRNA_PseU:0 14806 chr17 35300353 35300353 1 + G A STAD 35300352 + 35300332 35300372 41 CAGCCCGCCCTTCTCGTCGCTGTCGGTCAACGGTGGGGCGA CAGCCCGCCCTTCTCGTCGCTATCGGTCAACGGTGGGGCGA < 41bp 0.466898772129289 0.8555485255819 0.22246963 0.4061954 prediction 0.7110970511638 Functional Gain - LHX1 ENSG00000132130 CDS Human other chr17:35300352 chr17:35300353 synonymous SNV . 0 22 hPsi_associated_SNPs_21082 0 0 0 0 0 exosome 0.432747208365836 0.437549834842068 0 0 hPsi_site_14806 iPseU_CNN:0;iRNA_PseU:0 14807 chr15 76019853 76019853 1 + G A UCEC 76019852 + 76019832 76019872 41 TCAAGCACTCACTCCACCTGTGCCCACTGGTCATCGACATT TCAAGCACTCACTCCACCTGTACCCACTGGTCATCGACATT < 41bp 0.522264467426092 0.877805650798352 0.27954057 0.5271282 prediction 0.71108236674452 Functional Gain - ODF3L1 ENSG00000182950 CDS Human protein_coding chr15:76019852 chr15:76019853 nonsynonymous SNV 0.529 2 22 hPsi_associated_SNPs_21083 0 0 0 0 0 exosome 0.438408955866823 0.43899108605045 0.0542564000000001 0 hPsi_site_14807 iPseU_CNN:0.0542564000000001;iRNA_PseU:0 14808 chr17 73567818 73567818 1 + G A LGG 73567817 + 73567797 73567837 41 CTATGCCTTCTCCCTGCGTGTGCCTCCCGCCGAGCGGAGAA CTATGCCTTCTCCCTGCGTGTACCTCCCGCCGAGCGGAGAA < 41bp 0.534635390959331 0.890176484212061 0.2869045 0.8419974 prediction 0.711082186505459 Functional Gain - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73567817 chr17:73567818 synonymous SNV . 0 22 hPsi_associated_SNPs_21084 0 0 1 0 1 Endoplasmic reticulum 0.438718978637979 0.438767967512271 0.6839948 0 hPsi_site_14808 iPseU_CNN:0.6839948;iRNA_PseU:0 14809 chr17 80441594 80441594 1 + G A BRCA 80441593 + 80441573 80441613 41 TTACTTCGTTTGTCTGCAGGTGAAATTGCTCAAATAATGGA TTACTTCGTTTGTCTGCAGGTAAAATTGCTCAAATAATGGA < 41bp 0.515022809218214 0.870557327560612 0.30506867 0.5639513 prediction 0.711069036684797 Functional Gain - NARF ENSG00000141562 CDS Human protein_coding chr17:80441593 chr17:80441594 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_21085 0 0 1 1 2 Cytosol 0.439512476589196 0.439169105765528 0.1279026 0 hPsi_site_14809 iPseU_CNN:0.1279026;iRNA_PseU:0 14810 chr19 33587133 33587133 1 + G A rs142214065 33587132 + 33587112 33587152 41 GGGTGAAGATGATGACTACTTGCCTGATAATGTGACCTTTG GGGTGAAGATGATGACTACTTACCTGATAATGTGACCTTTG < 41bp 0.525073102222359 0.880603580145869 0.2844807 0.6385786 prediction 0.71106095584702 Functional Gain - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33587132 chr19:33587133 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21086 0 0 1 0 0 Cytosol 0.438718592989332 0.438718543782699 0.2771572 0 hPsi_site_14810 iPseU_CNN:0.2771572;iRNA_PseU:0 14811 chr17 48597049 48597049 1 + G A HNSC 48597048 + 48597028 48597068 41 CGACTGGAATACTTGGGAGATGAGATGACAGGTCTGGTCAT CGACTGGAATACTTGGGAGATAAGATGACAGGTCTGGTCAT < 41bp 0.521084497802116 0.876603510073354 0.29010445 0.3036121 prediction 0.711038024542477 Functional Gain - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48597048 chr17:48597049 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21087 0 0 0 0 2 exosome 0.438738233826805 0.4387256142601 0 0 hPsi_site_14811 iPseU_CNN:0;iRNA_PseU:0 14812 chr7 100028248 100028248 1 + G A CESC 100028247 + 100028227 100028267 41 AACCTGAATAGCCTCCTGGATGAGGAAGTGAGCCGCACTCT AACCTGAATAGCCTCCTGGATAAGGAAGTGAGCCGCACTCT < 41bp 0.478961908673074 0.855518395006567 0.31753886 0.5437686 prediction 0.711036790013134 Functional Gain - MEPCE ENSG00000146834 CDS Human protein_coding chr7:100028247 chr7:100028248 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21088 0 0 1 0 1 chromatin 0.438721976879667 0.438781714631578 0.0875372000000001 0 hPsi_site_14812 iPseU_CNN:0.0875372000000001;iRNA_PseU:0 14813 chr3 113795635 113795635 1 + G A LUSC 113795634 + 113795614 113795654 41 GGAGTGATTGAAGGTGGAGATGTGATGGAAGAGAGGCTGAG GGAGTGATTGAAGGTGGAGATATGATGGAAGAGAGGCTGAG < 41bp 0.529600135986829 0.885116230987382 0.26677078 0.3158596 prediction 0.711032190001107 Functional Gain - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113795634 chr3:113795635 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_21089 0 0 1 0 1 Nucleus 0.438308451047113 0.438794496765408 0 0 hPsi_site_14813 iPseU_CNN:0;iRNA_PseU:0 14814 chr11 77583266 77583266 1 + G A rs2186564 77583265 + 77583245 77583285 41 CTCAAGAAACATGGCATTGATGTGCGGGTCCTCCAGACAGA CTCAAGAAACATGGCATTGATATGCGGGTCCTCCAGACAGA < 41bp 0.506329729724039 0.861839230854775 0.26053965 0.2627703 prediction 0.711019002261472 Functional Gain - AAMDC ENSG00000087884 CDS Human protein_coding chr11:77583265 chr11:77583266 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_21090 0 0 1 0 1 Ribosome 0.438720441154123 0.438724822039592 0 0 hPsi_site_14814 iPseU_CNN:0;iRNA_PseU:0 14815 chrX 38664295 38664295 1 + G A LUAD 38664294 + 38664274 38664314 41 GAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGC GAACAACATGGACCAGACGGTAATGGTGCCCAGCTTGCTGC < 41bp 0.523294076929138 0.878800119431504 0.2402893 0.81433725 prediction 0.711012085004732 Functional Gain - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664294 chrX:38664295 synonymous SNV . 0 22 hPsi_associated_SNPs_21091 0 0 1 0 0 cytosol 0.438718772504505 0.438717730149194 0.6286745 0 hPsi_site_14815 iPseU_CNN:0.6286745;iRNA_PseU:0 14816 chr10 88950319 88950319 1 + G A GBM 88950318 + 88950298 88950338 41 TGGCAGTCAGCGCAGAACCTTGTGTATTAAAGATTCAGAGC TGGCAGTCAGCGCAGAACCTTATGTATTAAAGATTCAGAGC < 41bp 0.516967107438221 0.872472005940863 0.3148507 0.34854287 prediction 0.711009797005283 Functional Gain - FAM35A ENSG00000122376 CDS Human protein_coding chr10:88950318 chr10:88950319 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21092 0 0 1 0 1 Cytosol 0.432135484016516 0.438618184358692 0 0 hPsi_site_14816 iPseU_CNN:0;iRNA_PseU:0 14817 chr5 140603384 140603384 1 + G A rs61751919 140603383 + 140603363 140603403 41 TGTGGCTCCACCGAGCCCTGTGTGCTGCATTTTCAGGTGGT TGTGGCTCCACCGAGCCCTGTATGCTGCATTTTCAGGTGGT < 41bp 0.511095581371624 0.866596333119594 0.27869156 0.46133015 prediction 0.711001503495942 Functional Gain - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140603383 chr5:140603384 nonsynonymous SNV 0.851 0 22 hPsi_associated_SNPs_21093 0 0 0 0 0 exosome 0.433239696848237 0.436245048241243 0 0 hPsi_site_14817 iPseU_CNN:0;iRNA_PseU:0 14818 chr9 139235466 139235466 1 + G A CESC 139235465 + 139235445 139235485 41 CCCAGGGTGAGTTCCAGGGTTGTGGGGGGGTCTTGCTCCCC CCCAGGGTGAGTTCCAGGGTTATGGGGGGGTCTTGCTCCCC < 41bp 0.483603408902479 0.855500524952588 0.3411135 0.64382905 prediction 0.711001049905176 Functional Gain - GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139235465 chr9:139235466 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21094 0 0 0 0 1 Cytosol 0.438740102072714 0.438728788633544 0.2876581 0 hPsi_site_14818 iPseU_CNN:0.2876581;iRNA_PseU:0 14819 chr8 61533342 61533342 1 + G A UCEC 61533341 + 61533321 61533361 41 GCTGTTGAGTCTGTTTTTACTGTCTAGCTGCCCAACGGGGC GCTGTTGAGTCTGTTTTTACTATCTAGCTGCCCAACGGGGC < 41bp 0.478647345193189 0.855499326772787 0.3288893 0.48853332 prediction 0.710998653545574 Functional Gain - RAB2A ENSG00000104388 CDS Human protein_coding chr8:61533341 chr8:61533342 nonsynonymous SNV 0.920 1 22 hPsi_associated_SNPs_21095 0 0 1 0 0 Ribosome 0.424759968446156 0.438622187537343 0 0 hPsi_site_14819 iPseU_CNN:0;iRNA_PseU:0 14820 chr16 27375462 27375462 1 + G A rs551050083 27375461 + 27375441 27375481 41 CTTGTGAACGAGTTGTTGGCTGCTCCCTCCACAGCTTCTGC CTTGTGAACGAGTTGTTGGCTACTCCCTCCACAGCTTCTGC < 41bp 0.492236768053775 0.855487461851307 0.29659337 0.74685717 prediction 0.710974923702614 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27375461 chr16:27375462 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21096 0 0 1 0 0 Endoplasmic reticulum 0.438747734835577 0.438694514773587 0.49371434 0 hPsi_site_14820 iPseU_CNN:0.49371434;iRNA_PseU:0 14821 chr1 202977833 202977833 1 + G A HNSC 202977832 + 202977812 202977852 41 GAGGAAGCTCTTTCTGGGGCTGGTGAGCCCTGTGACATCAT GAGGAAGCTCTTTCTGGGGCTAGTGAGCCCTGTGACATCAT < 41bp 0.473064215373892 0.855486901518931 0.26754266 0.38182253 prediction 0.710973803037862 Functional Gain - TMEM183A;TMEM183B ENSG00000163444 CDS Human protein_coding chr1:202977832 chr1:202977833 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_21097 0 0 1 0 1 unknown 0.438718590221826 0.43871858772376 0 0 hPsi_site_14821 iPseU_CNN:0;iRNA_PseU:0 14822 chr3 32931950 32931950 1 + G A UCEC 32931949 + 32931929 32931969 41 TGAGAGCACCATCAGTGCCGTGCAGCAGGTCCTGGAGGAGG TGAGAGCACCATCAGTGCCGTACAGCAGGTCCTGGAGGAGG < 41bp 0.529143756279123 0.884618871158957 0.15651396 0.3332579 prediction 0.710950229759669 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32931949 chr3:32931950 synonymous SNV . 0 22 hPsi_associated_SNPs_21098 0 0 1 0 1 cytosol 0.438718676478445 0.43871850524792 0 0 hPsi_site_14822 iPseU_CNN:0;iRNA_PseU:0 14823 chr11 60889150 60889150 1 + G A LAML 60889149 + 60889129 60889169 41 CTGTGAAGGCACCGTGGAGGTGCGCCAGGGGGCTCAGTGGG CTGTGAAGGCACCGTGGAGGTACGCCAGGGGGCTCAGTGGG < 41bp 0.456458141239513 0.855468598455117 0.22444421 0.75373673 prediction 0.710937196910234 Functional Gain - CD5 ENSG00000110448 CDS Human protein_coding chr11:60889149 chr11:60889150 synonymous SNV . 0 22 hPsi_associated_SNPs_21099 0 0 0 0 1 exosome 0.438711144783834 0.438714868072017 0.50747346 0 hPsi_site_14823 iPseU_CNN:0.50747346;iRNA_PseU:0 14824 chr17 72436755 72436755 1 + G A rs145618350 72436754 + 72436734 72436774 41 CACCTGGGATGACCCCACGCTGGCCATCGCCCTCGCCGCCA CACCTGGGATGACCCCACGCTAGCCATCGCCCTCGCCGCCA < 41bp 0.46112666214995 0.855453480211865 0.16034567 0.3724516 prediction 0.710906960423729 Functional Gain - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436754 chr17:72436755 synonymous SNV . 0 22 hPsi_associated_SNPs_21100 0 0 1 0 0 nucleus 0.438861637223697 0.438848578076976 0 0 hPsi_site_14824 iPseU_CNN:0;iRNA_PseU:0 14825 chr12 56115489 56115489 1 + G A BLCA 56115488 + 56115468 56115508 41 CACAGGGCTTTTTGGTCTGGTGAATAATGCTGGTGTGGCTG CACAGGGCTTTTTGGTCTGGTAAATAATGCTGGTGTGGCTG < 41bp 0.476023391330835 0.855451974073135 0.19928741 0.26251662 prediction 0.71090394814627 Functional Gain - RDH5 ENSG00000135437;ENSG00000258311 CDS Human other chr12:56115488 chr12:56115489 synonymous SNV . 0 22 hPsi_associated_SNPs_21101 0 0 0 0 1 Cytosol 0.438647982819349 0.438710676449477 0 0 hPsi_site_14825 iPseU_CNN:0;iRNA_PseU:0 14826 chr20 4163076 4163076 1 + G A PRAD 4163075 + 4163055 4163095 41 AGTGGTCGGTGGTGGTGGAGTGCGAGGACTGTGAGCTGATC AGTGGTCGGTGGTGGTGGAGTACGAGGACTGTGAGCTGATC < 41bp 0.470395937063337 0.855448189640872 0.2987026 0.63186955 prediction 0.710896379281744 Functional Gain - SMOX ENSG00000088826 CDS Human protein_coding chr20:4163075 chr20:4163076 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_21102 0 0 1 0 0 Ribosome 0.438220796936914 0.43223759595769 0.2637391 0 hPsi_site_14826 iPseU_CNN:0.2637391;iRNA_PseU:0 14827 chr1 248039559 248039559 1 + G A UCEC 248039558 + 248039538 248039578 41 TCCAACTGGAAAGTCCTCGCTGCATTGGGATTTTCTTGGAC TCCAACTGGAAAGTCCTCGCTACATTGGGATTTTCTTGGAC < 41bp 0.477607042661825 0.855441174330641 0.261904 0.43891788 prediction 0.710882348661283 Functional Gain - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248039558 chr1:248039559 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21103 0 0 0 0 0 Cytosol 0.43872597674421 0.438507617246763 0 0 hPsi_site_14827 iPseU_CNN:0;iRNA_PseU:0 14828 chr2 143643070 143643070 1 + G A GBM 143643069 + 143643049 143643089 41 AGCTGAGGCACTTCAGGGAGTGCTTTTATATTCCCAAAATA AGCTGAGGCACTTCAGGGAGTACTTTTATATTCCCAAAATA < 41bp 0.475945087707455 0.855437469920488 0.2729606 0.38576698 prediction 0.710874939840975 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143643069 chr2:143643070 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_21104 0 0 1 0 1 Nucleus 0.438718592995083 0.43871859299366 0 0 hPsi_site_14828 iPseU_CNN:0;iRNA_PseU:0 14829 chr3 25833439 25833439 1 + G A UCEC 25833438 + 25833418 25833458 41 TTGGGCTATGGACTCTCAGGTGATGCTGGTCACATAACTGC TTGGGCTATGGACTCTCAGGTAATGCTGGTCACATAACTGC < 41bp 0.465938579997541 0.855431363985722 0.21809709 0.59844846 prediction 0.710862727971444 Functional Gain - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833438 chr3:25833439 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21105 0 0 1 0 2 Ribosome 0.438720332801625 0.438718479794774 0.19689692 0 hPsi_site_14829 iPseU_CNN:0.19689692;iRNA_PseU:0 14830 chr17 8370753 8370753 1 + G A rs117430541 8370752 + 8370732 8370772 41 CCCCAAATCAGGTCAATGTGTGCCCTCCTGAGCTCCCACCC CCCCAAATCAGGTCAATGTGTACCCTCCTGAGCTCCCACCC < 41bp 0.494584025093859 0.855407705600081 0.288751 0.6127781 prediction 0.710815411200161 Functional Gain - NDEL1 ENSG00000166579 UTR3 Human protein_coding chr17:8370752 chr17:8370753 . . 0 22 hPsi_associated_SNPs_21106 0 0 1 0 0 Ribosome 0.438718592997475 0.438718592947055 0.2255562 0 hPsi_site_14830 iPseU_CNN:0.2255562;iRNA_PseU:0 14831 chr11 57982460 57982460 1 + G A UCEC 57982459 + 57982439 57982479 41 TTCCTTGCCAATCTATCCTTTGCTGATATTTCCTCCATTTC TTCCTTGCCAATCTATCCTTTACTGATATTTCCTCCATTTC < 41bp 0.489692299221367 0.855400952607646 0.29558504 0.5844787 prediction 0.710801905215293 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57982459 chr11:57982460 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21107 0 0 0 0 0 unknown 0.438716739489098 0.438692112888022 0.1689574 0 hPsi_site_14831 iPseU_CNN:0.1689574;iRNA_PseU:0 14832 chr17 6929811 6929811 1 + G A LAML 6929810 + 6929790 6929830 41 AGCTGCCAGAACTGTGAGGCTGTGGCAGGGTGCTCATCGGG AGCTGCCAGAACTGTGAGGCTATGGCAGGGTGCTCATCGGG < 41bp 0.53489872005952 0.890290660147857 0.29102892 0.43563613 prediction 0.710783880176675 Functional Gain - BCL6B ENSG00000161940 CDS Human protein_coding chr17:6929810 chr17:6929811 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21108 0 0 0 0 1 Endoplasmic reticulum 0.43871854298097 0.438718589808328 0 0 hPsi_site_14832 iPseU_CNN:0;iRNA_PseU:0 14833 chr2 18112930 18112930 1 + G A SKCM 18112929 + 18112909 18112949 41 AATGAGGATGGAGAAGTGGATGATCCGGTGCTGGAAGGAGT AATGAGGATGGAGAAGTGGATAATCCGGTGCTGGAAGGAGT < 41bp 0.475758436039855 0.855363600576618 0.20521554 0.61193436 prediction 0.710727201153235 Functional Gain - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18112929 chr2:18112930 nonsynonymous SNV 0.945 2 22 hPsi_associated_SNPs_21109 0 0 0 0 0 Cytosol 0.43901728387554 0.438716557757438 0.22386872 0 hPsi_site_14833 iPseU_CNN:0.22386872;iRNA_PseU:0 14834 chr11 64698016 64698016 1 + G A HNSC 64698015 + 64697995 64698035 41 GCAGTTCCTGGTTCGCGTCCTGATCCCCCTGCACTCTGTCA GCAGTTCCTGGTTCGCGTCCTAATCCCCCTGCACTCTGTCA < 41bp 0.530231967962029 0.885586369573216 0.26057547 0.82048345 prediction 0.710708803222373 Functional Gain - PPP2R5B ENSG00000068971 CDS Human protein_coding chr11:64698015 chr11:64698016 synonymous SNV . 0 22 hPsi_associated_SNPs_21110 0 0 0 0 2 Ribosome 0.438719730647904 0.438638855533227 0.6409669 0 hPsi_site_14834 iPseU_CNN:0.6409669;iRNA_PseU:0 14835 chr1 11586758 11586758 1 + G A HNSC 11586757 + 11586737 11586777 41 CAAGAAGCTGACCGCTTGTATGTCTACAGTAGGGCTGCTCC CAAGAAGCTGACCGCTTGTATATCTACAGTAGGGCTGCTCC < 41bp 0.459502638516427 0.855354057429734 0.31041566 0.31952438 prediction 0.710708114859467 Functional Gain - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11586757 chr1:11586758 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21111 0 0 0 0 1 exosome 0.438738474734788 0.438718573632465 0 0 hPsi_site_14835 iPseU_CNN:0;iRNA_PseU:0 14836 chr11 639762 639762 1 + G A rs560829733 639761 + 639741 639781 41 GGCGGTGGCGGCGCCCGTACTGTGCGGCCTCAACGACGTGC GGCGGTGGCGGCGCCCGTACTATGCGGCCTCAACGACGTGC < 41bp 0.511789732757524 0.867138946629368 0.8277 0.9701687 prediction 0.710698427743688 Functional Gain - DRD4 ENSG00000069696 CDS Human protein_coding chr11:639761 chr11:639762 synonymous SNV . 0 22 hPsi_associated_SNPs_21112 0 0 0 0 0 exosome 0.438708399046142 0.438717355141842 0.2849374 0 hPsi_site_14836 iPseU_CNN:0.2849374;iRNA_PseU:0 14837 chr17 33586624 33586624 1 + G A LUSC 33586623 + 33586603 33586643 41 GGAGAAATTCTGCTGTGCGGTGTTTGCCAAAGTGCCTAGTT GGAGAAATTCTGCTGTGCGGTATTTGCCAAAGTGCCTAGTT < 41bp 0.468220614984145 0.855343429459889 0.33436477 0.8178896 prediction 0.710686858919778 Functional Gain - SLFN5 ENSG00000166750 CDS Human protein_coding chr17:33586623 chr17:33586624 synonymous SNV . 0 22 hPsi_associated_SNPs_21113 0 0 0 0 1 nucleus 0.438672627083761 0.438332454023345 0.6357792 0 hPsi_site_14837 iPseU_CNN:0.6357792;iRNA_PseU:0 14838 chr6 161508794 161508794 1 + G A UCEC 161508793 + 161508773 161508813 41 TGAGGAGAAGAGTATTATTTTGCAGTTACTCAATGCAGCTG TGAGGAGAAGAGTATTATTTTACAGTTACTCAATGCAGCTG < 41bp 0.461629837097544 0.855343250229203 0.17767444 0.22890711 prediction 0.710686500458406 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161508793 chr6:161508794 synonymous SNV . 0 22 hPsi_associated_SNPs_21114 0 0 1 0 1 Cytosol 0.438729364072765 0.438591539788162 0 0 hPsi_site_14838 iPseU_CNN:0;iRNA_PseU:0 14839 chrX 51486763 51486763 1 + G A UCEC 51486762 + 51486742 51486782 41 GCAGCGACTCGGCGCCCGATTGCTGGGACCAGGTGGACATG GCAGCGACTCGGCGCCCGATTACTGGGACCAGGTGGACATG < 41bp 0.513002632176324 0.868345671378885 0.23158658 0.7611301 prediction 0.710686078405122 Functional Gain - GSPT2 ENSG00000189369 CDS Human protein_coding chrX:51486762 chrX:51486763 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21115 0 0 0 0 0 Cytosol 0.438793180172003 0.438735664962673 0.5222602 0 hPsi_site_14839 iPseU_CNN:0.5222602;iRNA_PseU:0 14840 chr1 230827187 230827187 1 + G A LUSC 230827186 + 230827166 230827206 41 GAAGAAGATGGAAGAGAGCCTGAAAAGGCTGAAACAAGCCA GAAGAAGATGGAAGAGAGCCTAAAAAGGCTGAAACAAGCCA < 41bp 0.471682266600333 0.855342493154751 0.32498235 0.34548104 prediction 0.710684986309502 Functional Gain - COG2 ENSG00000135775 CDS Human protein_coding chr1:230827186 chr1:230827187 synonymous SNV . 0 22 hPsi_associated_SNPs_21116 0 0 1 0 1 Cytosol 0.438808297590778 0.438830625672709 0 0 hPsi_site_14840 iPseU_CNN:0;iRNA_PseU:0 14841 chr17 40705822 40705822 1 + C T CESC 40705823 - 40705803 40705843 41 GCTGGCGCAATAAACGTCATTGAAAGGCAGCCCTTAGGTGG GCTGGCGCAATAAACGTCATTAAAAGGCAGCCCTTAGGTGG < 41bp 0.508115092096991 0.863438522905449 0.20957404 0.25039068 prediction 0.710646861616917 Functional Gain - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705823 chr17:40705822 synonymous SNV . 0 22 hPsi_associated_SNPs_21117 0 0 0 0 0 chromatin 0.438734008953082 0.438652620194716 0 0 hPsi_site_14841 iPseU_CNN:0;iRNA_PseU:0 14842 chr16 46724979 46724979 1 + G A UCEC 46724978 + 46724958 46724998 41 CGCACCACGGAGACCAGCAGTGCAGTCATGTGCCTGGACCT CGCACCACGGAGACCAGCAGTACAGTCATGTGCCTGGACCT < 41bp 0.456387545624659 0.855315218274662 0.30156583 0.50029683 prediction 0.710630436549325 Functional Gain - ORC6 ENSG00000091651 CDS Human protein_coding chr16:46724978 chr16:46724979 nonsynonymous SNV 0.356 4 22 hPsi_associated_SNPs_21118 0 0 1 0 1 Cytosol 0.438750754473858 0.439039568129565 0.000593660000000051 0 hPsi_site_14842 iPseU_CNN:0.000593660000000051;iRNA_PseU:0 14843 chr11 73675934 73675934 1 + G A COAD 73675933 + 73675913 73675953 41 CCTCCTGCAGAGTTTTTTGATGCAGAAGGAAGTGAGGTAGA CCTCCTGCAGAGTTTTTTGATACAGAAGGAAGTGAGGTAGA < 41bp 0.46139954137102 0.85530814342788 0.17223096 0.2463395 prediction 0.710616286855761 Functional Gain - DNAJB13 ENSG00000187726 CDS Human protein_coding chr11:73675933 chr11:73675934 nonsynonymous SNV 0.962 0 22 hPsi_associated_SNPs_21119 0 0 1 0 0 exosome 0.438718592938937 0.438718591874232 0 0 hPsi_site_14843 iPseU_CNN:0;iRNA_PseU:0 14844 chr1 161127443 161127443 1 + G A COAD 161127442 + 161127422 161127462 41 CCTACTACTGCCCCAGAAATTGCAGTTCCTGAGCTGGATGG CCTACTACTGCCCCAGAAATTACAGTTCCTGAGCTGGATGG < 41bp 0.526248220824718 0.881553708764746 0.2507652 0.3460257 prediction 0.710610975880055 Functional Gain - UFC1 ENSG00000143222 CDS Human protein_coding chr1:161127442 chr1:161127443 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21120 0 0 1 0 2 Ribosome 0.438718602926438 0.438718388171665 0 0 hPsi_site_14844 iPseU_CNN:0;iRNA_PseU:0 14845 chr3 160968630 160968630 1 + G A LUSC 160968629 + 160968609 160968649 41 GCACCTCGAATTAGTCTGGCTGAGATGCTTGAAGACCTTCA GCACCTCGAATTAGTCTGGCTAAGATGCTTGAAGACCTTCA < 41bp 0.511496203355676 0.866799487312849 0.21861795 0.29280686 prediction 0.710606567914346 Functional Gain - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160968629 chr3:160968630 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21121 0 0 1 0 2 Nucleus 0.438689434084511 0.438724325578369 0 0 hPsi_site_14845 iPseU_CNN:0;iRNA_PseU:0 14846 chr1 177250398 177250398 1 + G A OV 177250397 + 177250377 177250417 41 AGCCTGCCCTTTGACCCAGATGCTATCCGGGACTTAATTCT AGCCTGCCCTTTGACCCAGATACTATCCGGGACTTAATTCT < 41bp 0.482229502973307 0.855298208670357 0.14548656 0.29226178 prediction 0.710596417340714 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177250397 chr1:177250398 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21122 0 0 0 0 0 Nucleus 0.438718655843343 0.438719727866244 0 0 hPsi_site_14846 iPseU_CNN:0;iRNA_PseU:0 14847 chr6 125379145 125379145 1 + G A BLCA 125379144 + 125379124 125379164 41 AAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAGGA AAGTGCCACTCTCCTTGGCATAAAGGTGTTAACTGCAAGGA < 41bp 0.530788466075657 0.886083382235044 0.2553954 0.367141 prediction 0.710589832318773 Functional Gain - RNF217 ENSG00000146373 CDS Human protein_coding chr6:125379144 chr6:125379145 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21123 0 0 1 0 1 Cytosol 0.438686615739029 0.438721942246527 0 0 hPsi_site_14847 iPseU_CNN:0;iRNA_PseU:0 14848 chr22 19119536 19119536 1 + C T BRCA 19119537 - 19119517 19119557 41 GGGCATGGAGCCGCAGACCATGATGTACAGGATCACGCCCA GGGCATGGAGCCGCAGACCATAATGTACAGGATCACGCCCA < 41bp 0.492193080698135 0.855289872207361 0.1863653 0.24782851 prediction 0.710579744414722 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119537 chr22:19119536 synonymous SNV . 0 22 hPsi_associated_SNPs_21124 0 0 0 1 0 exosome 0.438670258986319 0.438716803762473 0 0 hPsi_site_14848 iPseU_CNN:0;iRNA_PseU:0 14849 chr12 6647393 6647393 1 + G A rs138263904 6647392 + 6647372 6647412 41 AGGAAGAGAGAGACCCTCACTGCTGGGGAGTCCCTGCCACA AGGAAGAGAGAGACCCTCACTACTGGGGAGTCCCTGCCACA < 41bp 0.490558363376308 0.85528073708101 0.25765395 0.35741657 prediction 0.71056147416202 Functional Gain - GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647392 chr12:6647393 . . 0 22 hPsi_associated_SNPs_21125 0 0 1 0 0 Ribosome 0.438719988575885 0.438718048091273 0 0 hPsi_site_14849 iPseU_CNN:0;iRNA_PseU:0 14850 chr19 35632109 35632109 1 + G A LUSC 35632108 + 35632088 35632128 41 CCTGGGCATCCTCATCGTGCTGAGTGAGTGCCCCTAGCTCC CCTGGGCATCCTCATCGTGCTAAGTGAGTGCCCCTAGCTCC < 41bp 0.522121107143033 0.877401701874706 0.296045 0.8294167 prediction 0.710561189463346 Functional Gain - FXYD1 ENSG00000266964 CDS Human protein_coding chr19:35632108 chr19:35632109 synonymous SNV . 0 22 hPsi_associated_SNPs_21126 0 0 1 0 2 Cytosol 0.438728699906498 0.438718857518294 0.6588334 0 hPsi_site_14850 iPseU_CNN:0.6588334;iRNA_PseU:0 14851 chr11 61213462 61213462 1 + G A BLCA 61213461 + 61213441 61213481 41 AAATGAAGTCATGGCCCTGCTGAGAGACTTTGCTAAAAACA AAATGAAGTCATGGCCCTGCTAAGAGACTTTGCTAAAAACA < 41bp 0.50464681207798 0.859925387747691 0.32633883 0.43026286 prediction 0.710557151339421 Functional Gain - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61213461 chr11:61213462 synonymous SNV . 0 22 hPsi_associated_SNPs_21127 0 0 1 0 1 chromatin 0.438718593080104 0.438718048921019 0 0 hPsi_site_14851 iPseU_CNN:0;iRNA_PseU:0 14852 chr11 119206619 119206619 1 + G A UCEC 119206618 + 119206598 119206638 41 CAGGCACTCAGCCAGCTCCATGCCCGGCCATCCTACCACCG CAGGCACTCAGCCAGCTCCATACCCGGCCATCCTACCACCG < 41bp 0.478764986024558 0.855257770504253 0.27060366 0.56023616 prediction 0.710515541008506 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206618 chr11:119206619 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21128 0 0 1 0 0 chromatin 0.438718587552597 0.438717487730616 0.12047232 0 hPsi_site_14852 iPseU_CNN:0.12047232;iRNA_PseU:0 14853 chr8 42585782 42585782 1 + G A LIHC 42585781 + 42585761 42585801 41 TGGAATCCTGATGATTATGGTGGGATCCATTCCATTAAAGT TGGAATCCTGATGATTATGGTAGGATCCATTCCATTAAAGT < 41bp 0.4627457214276 0.8552561717704 0.26846766 0.6844499 prediction 0.7105123435408 Functional Gain - CHRNB3 ENSG00000147432 CDS Human protein_coding chr8:42585781 chr8:42585782 nonsynonymous SNV 0.890 4 22 hPsi_associated_SNPs_21129 0 0 0 0 2 exosome 0.438717208997417 0.438721345745364 0.3688998 0 hPsi_site_14853 iPseU_CNN:0.3688998;iRNA_PseU:0 14854 chr22 40759030 40759030 1 + G A SKCM 40759029 + 40759009 40759049 41 TCTTACCGCAGATACTATATTGAATACGCTGCAGAACATTT TCTTACCGCAGATACTATATTAAATACGCTGCAGAACATTT < 41bp 0.528578737999522 0.883824436602709 0.20597833 0.25952706 prediction 0.710491397206375 Functional Gain - ADSL ENSG00000239900 CDS Human protein_coding chr22:40759029 chr22:40759030 synonymous SNV . 0 22 hPsi_associated_SNPs_21130 0 0 1 2 1 Ribosome 0.449159070771209 0.438641877810887 0 0 hPsi_site_14854 iPseU_CNN:0;iRNA_PseU:0 14855 chr8 145152203 145152203 1 + G A LUSC 145152202 + 145152182 145152222 41 GCGGCACAAGTGGTCAGTCCTGAAGAGTCGGAAGCTGGCAT GCGGCACAAGTGGTCAGTCCTAAAGAGTCGGAAGCTGGCAT < 41bp 0.491478167292397 0.855238092092461 0.25961813 0.411024 prediction 0.710476184184921 Functional Gain - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145152202 chr8:145152203 synonymous SNV . 0 22 hPsi_associated_SNPs_21131 0 0 1 0 1 Ribosome 0.440341023511479 0.438713653115632 0 0 hPsi_site_14855 iPseU_CNN:0;iRNA_PseU:0 14856 chr3 9960231 9960231 1 + G A THYM 9960230 + 9960210 9960250 41 TCCTTCCAGGCCTACCCTACTGCCCGCTGCGTCCTGCTGGA TCCTTCCAGGCCTACCCTACTACCCGCTGCGTCCTGCTGGA < 41bp 0.517690866933417 0.872918119581198 0.14370972 0.27046075 prediction 0.710454505295563 Functional Gain - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9960230 chr3:9960231 nonsynonymous SNV 0.421 0 22 hPsi_associated_SNPs_21132 0 0 0 1 3 Ribosome 0.43857734669021 0.438240129552347 0 0 hPsi_site_14856 iPseU_CNN:0;iRNA_PseU:0 14857 chr4 107252948 107252948 1 + G A KIRC 107252947 + 107252927 107252967 41 ACTGCTAGAAAACACCCTGATGCAGATTCTTTGTATGTGGA ACTGCTAGAAAACACCCTGATACAGATTCTTTGTATGTGGA < 41bp 0.471301399396791 0.855212324976486 0.23363271 0.25409478 prediction 0.710424649952973 Functional Gain - AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107252947 chr4:107252948 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21133 0 0 1 0 1 Ribosome 0.438683845544531 0.438723820845009 0 0 hPsi_site_14857 iPseU_CNN:0;iRNA_PseU:0 14858 chr11 212959 212959 1 + G A BLCA 212958 + 212938 212978 41 GATGAGGACACAGACACAGATGAGTACAAGGAAGCCAAAGC GATGAGGACACAGACACAGATAAGTACAAGGAAGCCAAAGC < 41bp 0.46353175648352 0.855210941829203 0.25103486 0.32313204 prediction 0.710421883658406 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:212958 chr11:212959 nonsynonymous SNV 0.922 4 22 hPsi_associated_SNPs_21134 0 0 1 0 1 Ribosome 0.439522693972797 0.438747618738108 0 0 hPsi_site_14858 iPseU_CNN:0;iRNA_PseU:0 14859 chr19 10747091 10747091 1 + G A LUAD 10747090 + 10747070 10747110 41 GTCGGGCTACCACCGGGCCCTGCTGGGCCTGCAGATCTTCA GTCGGGCTACCACCGGGCCCTACTGGGCCTGCAGATCTTCA < 41bp 0.455065745951958 0.855210011706149 0.2876197 0.5282181 prediction 0.710420023412298 Functional Gain - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10747090 chr19:10747091 synonymous SNV . 0 22 hPsi_associated_SNPs_21135 0 0 1 0 1 Ribosome 0.438718534481964 0.43871853724367 0.0564362 0 hPsi_site_14859 iPseU_CNN:0.0564362;iRNA_PseU:0 14860 chr1 55474242 55474242 1 + G A SKCM 55474241 + 55474221 55474261 41 CTGTACTATGGGCTGCCAGATGGAGCCGGGGACCTCCTCCC CTGTACTATGGGCTGCCAGATAGAGCCGGGGACCTCCTCCC < 41bp 0.515520449587113 0.870729828628665 0.28421658 0.57190114 prediction 0.710418758083105 Functional Gain - BSND ENSG00000162399 CDS Human protein_coding chr1:55474241 chr1:55474242 nonsynonymous SNV 0.923 1 22 hPsi_associated_SNPs_21136 0 0 0 0 0 unknown 0.438718592966422 0.438718592751799 0.14380228 0 hPsi_site_14860 iPseU_CNN:0.14380228;iRNA_PseU:0 14861 chr17 55182893 55182893 1 + G A SKCM 55182892 + 55182872 55182912 41 TGCTGGCGCTCCTCGGCTGGTGGTGGTTTTTCTCTCGTAAA TGCTGGCGCTCCTCGGCTGGTAGTGGTTTTTCTCTCGTAAA < 41bp 0.467782216200235 0.855199912564847 0.32795683 0.70641905 prediction 0.710399825129693 Functional Gain - AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55182892 chr17:55182893 stopgain 1.000 1 22 hPsi_associated_SNPs_21137 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718593827869 0.4128381 0 hPsi_site_14861 iPseU_CNN:0.4128381;iRNA_PseU:0 14862 chr1 153190910 153190910 1 + G A rs562691020 153190909 + 153190889 153190929 41 AGGAGCTATTCCAGACAAAATGTGTGGAGGTTTGCCCACAG AGGAGCTATTCCAGACAAAATATGTGGAGGTTTGCCCACAG < 41bp 0.485208085581035 0.855199753099202 0.33716762 0.3395586 prediction 0.710399506198405 Functional Gain - PRR9 ENSG00000203783 CDS Human protein_coding chr1:153190909 chr1:153190910 nonsynonymous SNV 0.976 2 22 hPsi_associated_SNPs_21138 0 0 0 0 0 exosome 0.438718588143927 0.438718578431355 0 0 hPsi_site_14862 iPseU_CNN:0;iRNA_PseU:0 14863 chr12 57619487 57619487 1 + G A UCEC 57619486 + 57619466 57619506 41 ACAAACTGGTGCAGAAGGTGTGCCCAGACTATAACTTCCAG ACAAACTGGTGCAGAAGGTGTACCCAGACTATAACTTCCAG < 41bp 0.51772283931773 0.87292245137299 0.18324086 0.33699512 prediction 0.710399224110519 Functional Gain - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619486 chr12:57619487 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21139 0 0 1 0 0 exosome 0.438063662448937 0.438717745242536 0 0 hPsi_site_14863 iPseU_CNN:0;iRNA_PseU:0 14864 chr17 48618666 48618666 1 + G A STAD 48618665 + 48618645 48618685 41 GGAGGGGCTGGAGCAGGCCCTGCCCTCTGGGAAGCCCAGCA GGAGGGGCTGGAGCAGGCCCTACCCTCTGGGAAGCCCAGCA < 41bp 0.452591797888841 0.855194961771064 0.21690938 0.35310936 prediction 0.710389923542128 Functional Gain - EPN3 ENSG00000049283 CDS Human protein_coding chr17:48618665 chr17:48618666 synonymous SNV . 0 22 hPsi_associated_SNPs_21140 0 0 0 0 2 Nucleus 0.438718591110071 0.438685878922649 0 0 hPsi_site_14864 iPseU_CNN:0;iRNA_PseU:0 14865 chr16 71663374 71663374 1 + G A UCEC 71663373 + 71663353 71663393 41 GACTCCTGGAATGCCACAAATGCAAATACTTGTGCACTGGG GACTCCTGGAATGCCACAAATACAAATACTTGTGCACTGGG < 41bp 0.464736513487273 0.855190467246347 0.32015586 0.34301952 prediction 0.710380934492695 Functional Gain - MARVELD3 ENSG00000140832 CDS Human protein_coding chr16:71663373 chr16:71663374 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21141 0 0 1 0 1 Ribosome 0.438790360117784 0.438295929016397 0 0 hPsi_site_14865 iPseU_CNN:0;iRNA_PseU:0 14866 chr17 7480994 7480994 1 + G A UCEC 7480993 + 7480973 7481013 41 GGACTGGCTCACCGAGAAGATGCATGCTCGAGATTTCACTG GGACTGGCTCACCGAGAAGATACATGCTCGAGATTTCACTG < 41bp 0.53568989951718 0.89085567883132 0.3363576 0.8417263 prediction 0.710331558628279 Functional Gain - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480993 chr17:7480994 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_21142 0 0 1 0 1 Cytosol 0.439379715247799 0.443219457776512 0.6834526 0 hPsi_site_14866 iPseU_CNN:0.6834526;iRNA_PseU:0 14867 chr2 219603098 219603098 1 + G A UCEC 219603097 + 219603077 219603117 41 TAGCACGCCAGTGCCTTTATTGCAGACCACACAGGGCCTGA TAGCACGCCAGTGCCTTTATTACAGACCACACAGGGCCTGA < 41bp 0.53743433812017 0.892586710873596 0.23664883 0.4285934 prediction 0.710304745506851 Functional Gain - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219603097 chr2:219603098 synonymous SNV . 0 22 hPsi_associated_SNPs_21143 0 0 1 0 0 Cytosol 0.438509575932157 0.439106755980464 0 0 hPsi_site_14867 iPseU_CNN:0;iRNA_PseU:0 14868 chr1 219347267 219347267 1 + G A UCEC 219347266 + 219347246 219347286 41 CGGGGTCGGTTCTGCAGCGCTGTATCGTGTCGCCGGCAGGG CGGGGTCGGTTCTGCAGCGCTATATCGTGTCGCCGGCAGGG < 41bp 0.501758495176321 0.856909575169112 0.6205041 0.744268 prediction 0.710302159985584 Functional Gain - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219347266 chr1:219347267 nonsynonymous SNV 0.039 2 22 hPsi_associated_SNPs_21144 0 0 1 0 1 Ribosome 0.435466346676883 0.439751457290083 0.2475278 0 hPsi_site_14868 iPseU_CNN:0.2475278;iRNA_PseU:0 14869 chr1 155015923 155015923 1 + G A BLCA 155015922 + 155015902 155015942 41 GTACCGCCAGGAGGCCCGGCTGGAGTGGGCCCTGGGGCTGC GTACCGCCAGGAGGCCCGGCTAGAGTGGGCCCTGGGGCTGC < 41bp 0.456622048176169 0.855136285633492 0.3415047 0.7353955 prediction 0.710272571266985 Functional Gain - DCST1 ENSG00000163357 CDS Human protein_coding chr1:155015922 chr1:155015923 synonymous SNV . 0 22 hPsi_associated_SNPs_21145 0 0 0 0 2 nucleus 0.43871868029241 0.438718328991237 0.470791 0 hPsi_site_14869 iPseU_CNN:0.470791;iRNA_PseU:0 14870 chrX 13338045 13338045 1 + G A SKCM 13338044 + 13338024 13338064 41 TTCCTGTTTCTCATGAAAGATGAAATCCATGTTAATTGTAT TTCCTGTTTCTCATGAAAGATAAAATCCATGTTAATTGTAT < 41bp 0.496955206288531 0.855124208024965 0.34073192 0.57894695 prediction 0.71024841604993 Functional Gain - ATXN3L ENSG00000123594 CDS Human protein_coding chrX:13338044 chrX:13338045 synonymous SNV . 0 22 hPsi_associated_SNPs_21146 0 0 0 0 0 nucleoplasm 0.438357194101029 0.438720835287149 0.1578939 0 hPsi_site_14870 iPseU_CNN:0.1578939;iRNA_PseU:0 14871 chr20 3090947 3090947 1 + G A rs528094127 3090946 + 3090926 3090966 41 GGCACATTCGGGGCCCAGGATGCTCCCAGGCTGCTCTGGTA GGCACATTCGGGGCCCAGGATACTCCCAGGCTGCTCTGGTA < 41bp 0.524706579417578 0.87981014009919 0.23858076 0.64359355 prediction 0.710207121363224 Functional Gain - UBOX5 ENSG00000185019 CDS Human protein_coding chr20:3090946 chr20:3090947 synonymous SNV . 0 22 hPsi_associated_SNPs_21147 0 0 0 0 1 Cytosol 0.438718593008923 0.438718595442498 0.2871871 0 hPsi_site_14871 iPseU_CNN:0.2871871;iRNA_PseU:0 14872 chr9 35609162 35609162 1 + G A LUSC 35609161 + 35609141 35609181 41 CTGGGACACCTGCCCGCCGCTGCCGCTCACTACCCTCATCC CTGGGACACCTGCCCGCCGCTACCGCTCACTACCCTCATCC < 41bp 0.522204567415337 0.877303871435134 0.20652342 0.5687739 prediction 0.710198608039595 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35609161 chr9:35609162 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_21148 0 0 1 5 0 Cytosol 0.438723152073343 0.438716340619215 0.1375478 0 hPsi_site_14872 iPseU_CNN:0.1375478;iRNA_PseU:0 14873 chr14 63747706 63747706 1 + G A BLCA 63747705 + 63747685 63747725 41 ACAGGAGGACTACAACCAGCTGAGGCCACTCTCCTACCCCA ACAGGAGGACTACAACCAGCTAAGGCCACTCTCCTACCCCA < 41bp 0.46697859323258 0.855094735298988 0.21603778 0.4026286 prediction 0.710189470597975 Functional Gain - RHOJ ENSG00000126785 CDS Human protein_coding chr14:63747705 chr14:63747706 synonymous SNV . 0 22 hPsi_associated_SNPs_21149 0 0 0 0 1 Cytosol 0.438932572558825 0.438284208713826 0 0 hPsi_site_14873 iPseU_CNN:0;iRNA_PseU:0 14874 chr19 8841822 8841822 1 + G A UCEC 8841821 + 8841801 8841841 41 ACGCCAGGTATGTCTGCTGATGATGGGCTCCTCCTGGGTGG ACGCCAGGTATGTCTGCTGATAATGGGCTCCTCCTGGGTGG < 41bp 0.511510318384363 0.866596116002003 0.17725301 0.23507035 prediction 0.710171595235281 Functional Gain - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8841821 chr19:8841822 nonsynonymous SNV 0.013 2 22 hPsi_associated_SNPs_21150 0 0 0 0 0 unknown 0.438718590437123 0.438718592964446 0 0 hPsi_site_14874 iPseU_CNN:0;iRNA_PseU:0 14875 chr8 124449483 124449483 1 + G A UCEC 124449482 + 124449462 124449502 41 GATCCGTGCAGATTCATATTTGAAGAACTTTGCTTCTGACC GATCCGTGCAGATTCATATTTAAAGAACTTTGCTTCTGACC < 41bp 0.525888566122005 0.880948818671496 0.5428277 0.8009478 prediction 0.710120505098983 Functional Gain - WDYHV1 ENSG00000156795 CDS Human protein_coding chr8:124449482 chr8:124449483 synonymous SNV . 0 22 hPsi_associated_SNPs_21151 0 0 1 0 2 Ribosome 0.438716126270044 0.438718550228803 0.5162402 0 hPsi_site_14875 iPseU_CNN:0.5162402;iRNA_PseU:0 14876 chr20 25656912 25656912 1 + G A UCEC 25656911 + 25656891 25656931 41 CTCCTGAGTGTATTCTCTTGTGCACAACGAAGTATGACTTA CTCCTGAGTGTATTCTCTTGTACACAACGAAGTATGACTTA < 41bp 0.487240890277925 0.855054015615139 0.3122182 0.56504357 prediction 0.710108031230277 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656911 chr20:25656912 nonsynonymous SNV 0.030 4 22 hPsi_associated_SNPs_21152 0 0 1 0 0 Cytosol 0.437923564462479 0.435915081989106 0.13008714 0 hPsi_site_14876 iPseU_CNN:0.13008714;iRNA_PseU:0 14877 chr17 18855581 18855581 1 + C T LIHC 18855582 - 18855562 18855602 41 AAAATACACAGTGATGACGATGATGTCAGCCACGCTCAGCT AAAATACACAGTGATGACGATAATGTCAGCCACGCTCAGCT < 41bp 0.498272838320887 0.855052782399239 0.22471473 0.24842042 prediction 0.710105564798477 Functional Gain - SLC5A10 ENSG00000154025 CDS Human protein_coding chr17:18855582 chr17:18855581 synonymous SNV . 0 22 hPsi_associated_SNPs_21153 0 0 0 0 0 chromatin 0.430286601257589 0.429288401313033 0 0 hPsi_site_14877 iPseU_CNN:0;iRNA_PseU:0 14878 chr19 30499999 30499999 1 + G A UCEC 30499998 + 30499978 30500018 41 TAACACAAATGTGAATGCGATGCATCAAGTAACAGACTCTC TAACACAAATGTGAATGCGATACATCAAGTAACAGACTCTC < 41bp 0.524217443755365 0.879266533176142 0.3082462 0.41374078 prediction 0.710098178841555 Functional Gain - URI1 ENSG00000105176 CDS Human protein_coding chr19:30499998 chr19:30499999 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_21154 0 0 1 0 1 Cytosol 0.439198820961074 0.437005640202779 0 0 hPsi_site_14878 iPseU_CNN:0;iRNA_PseU:0 14879 chr17 40175902 40175902 1 + G A rs35364057 40175901 + 40175881 40175921 41 GAACAAGGGCAGCGGCTCCTTGGATGGCTGAAGAGCTGCCG GAACAAGGGCAGCGGCTCCTTAGATGGCTGAAGAGCTGCCG < 41bp 0.469419781129028 0.85504680462613 0.27565217 0.5596084 prediction 0.71009360925226 Functional Gain - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40175901 chr17:40175902 synonymous SNV . 0 22 hPsi_associated_SNPs_21155 0 0 1 0 0 Cytosol 0.438718650137491 0.438718567506709 0.1192168 0 hPsi_site_14879 iPseU_CNN:0.1192168;iRNA_PseU:0 14880 chr15 43483839 43483839 1 + G A LUAD 43483838 + 43483818 43483858 41 GATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGA GATCAGGTGGCACAGCTGGATAACATTGTGGATATTTCTGA < 41bp 0.479773788563477 0.85504338805575 0.1897749 0.29248112 prediction 0.7100867761115 Functional Gain - CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43483838 chr15:43483839 nonsynonymous SNV 0.964 4 22 hPsi_associated_SNPs_21156 0 0 1 0 0 Cytosol 0.438716049716163 0.439179099172596 0 0 hPsi_site_14880 iPseU_CNN:0;iRNA_PseU:0 14881 chr1 54678280 54678280 1 + G A BLCA 54678279 + 54678259 54678299 41 AGATCAGCTGCGGGCCAAGATGATCCTGTTTGCTTTTGGCA AGATCAGCTGCGGGCCAAGATAATCCTGTTTGCTTTTGGCA < 41bp 0.531718412198493 0.886758115463573 0.16105741 0.2586616 prediction 0.710079406530159 Functional Gain - MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54678279 chr1:54678280 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_21157 0 0 1 0 1 Ribosome 0.438718593399669 0.438718579540147 0 0 hPsi_site_14881 iPseU_CNN:0;iRNA_PseU:0 14882 chr5 139622968 139622968 1 + G A GBM 139622967 + 139622947 139622987 41 CCTGCTGGACGGCTCTCTGTTGCTGCTGTCTCTGGGACATG CCTGCTGGACGGCTCTCTGTTACTGCTGTCTCTGGGACATG < 41bp 0.532753051700938 0.887790893940577 0.43757993 0.6686735 prediction 0.710075684479278 Functional Gain - CYSTM1 ENSG00000120306 CDS Human protein_coding chr5:139622967 chr5:139622968 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21158 0 0 1 0 1 Ribosome 0.438703479834467 0.438310828470314 0.337347 0 hPsi_site_14882 iPseU_CNN:0.337347;iRNA_PseU:0 14883 chr20 18794553 18794553 1 + G A LUSC 18794552 + 18794532 18794572 41 CTGGGTTCAGTTCCAGAACCTGCCATGCCACATCCTCTAGA CTGGGTTCAGTTCCAGAACCTACCATGCCACATCCTCTAGA < 41bp 0.509872432443156 0.86490745315632 0.30253494 0.7499943 prediction 0.710070041426327 Functional Gain - SCP2D1 ENSG00000132631 CDS Human protein_coding chr20:18794552 chr20:18794553 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21159 0 0 0 0 0 unknown 0.438718591073792 0.438718007075716 0.4999886 0 hPsi_site_14883 iPseU_CNN:0.4999886;iRNA_PseU:0 14884 chr16 30773067 30773067 1 + C T UCEC 30773068 - 30773048 30773088 41 GGCACGGAAGAGCGGCGAGATGCTCAACCGCAAGACCAGCC GGCACGGAAGAGCGGCGAGATACTCAACCGCAAGACCAGCC < 41bp 0.510078960058591 0.86511318345167 0.27750224 0.88538706 prediction 0.710068446786158 Functional Gain - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30773068 chr16:30773067 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_21160 0 0 1 0 0 chromatin 0.438718593719303 0.438718598243689 0.77077412 0 hPsi_site_14884 iPseU_CNN:0.77077412;iRNA_PseU:0 14885 chr2 167133742 167133742 1 + G A SKCM 167133741 + 167133721 167133761 41 CACAGCAAAAATGAAGACGATGATGGCCAACACTAAGGTGA CACAGCAAAAATGAAGACGATAATGGCCAACACTAAGGTGA < 41bp 0.494848080600486 0.855029982436539 0.13890335 0.22330037 prediction 0.710059964873077 Functional Gain - SCN9A ENSG00000169432 CDS Human protein_coding chr2:167133741 chr2:167133742 synonymous SNV . 0 22 hPsi_associated_SNPs_21161 0 0 0 0 1 Endoplasmic reticulum 0.438727847655155 0.440556734661908 0 0 hPsi_site_14885 iPseU_CNN:0;iRNA_PseU:0 14886 chr2 85533377 85533377 1 + G A BLCA 85533376 + 85533356 85533396 41 GGAGGAAAAGAAGCCCCACGTGAAGAAGCCTCTGAATGCCT GGAGGAAAAGAAGCCCCACGTAAAGAAGCCTCTGAATGCCT < 41bp 0.52444662282398 0.879476161078203 0.227817 0.51177007 prediction 0.710059076508446 Functional Gain - TCF7L1 ENSG00000152284 CDS Human protein_coding chr2:85533376 chr2:85533377 synonymous SNV . 0 22 hPsi_associated_SNPs_21162 0 0 0 0 1 Endoplasmic reticulum 0.438718584921816 0.438718593001367 0.0235401399999999 0 hPsi_site_14886 iPseU_CNN:0.0235401399999999;iRNA_PseU:0 14887 chr11 193749 193749 1 + G A SKCM 193748 + 193728 193768 41 GGACAACGATGAGTTTTTCATGGACTTCCTGCAAACACTAC GGACAACGATGAGTTTTTCATAGACTTCCTGCAAACACTAC < 41bp 0.461633585126605 0.855028180281883 0.23070693 0.31532812 prediction 0.710056360563766 Functional Gain - SCGB1C1;SCGB1C2 ENSG00000188076 CDS Human protein_coding chr11:193748 chr11:193749 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_21163 0 0 0 0 1 unknown 0.438719047338846 0.436538424867955 0 0 hPsi_site_14887 iPseU_CNN:0;iRNA_PseU:0 14888 chr19 56669884 56669884 1 + G A rs61736532 56669883 + 56669863 56669903 41 GGGCCAGCAGCCTCCCCCGATGGGTCGTCAGCAACGAGGGT GGGCCAGCAGCCTCCCCCGATAGGTCGTCAGCAACGAGGGT < 41bp 0.466800671148665 0.855011778579235 0.1900157 0.2791095 prediction 0.71002355715847 Functional Gain - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56669883 chr19:56669884 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21164 0 0 1 0 2 Cytosol 0.43871859289796 0.438718608448546 0 0 hPsi_site_14888 iPseU_CNN:0;iRNA_PseU:0 14889 chr10 60573704 60573704 1 + G A CESC 60573703 + 60573683 60573723 41 CCTGGAAGTCATAGTGAATTTGCAGCTTCTATTGGCAGCCC CCTGGAAGTCATAGTGAATTTACAGCTTCTATTGGCAGCCC < 41bp 0.471584059329744 0.854998598111781 0.50251985 0.52143246 prediction 0.709997196223563 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60573703 chr10:60573704 nonsynonymous SNV 0.819 0 22 hPsi_associated_SNPs_21165 0 0 1 0 1 nucleus 0.43871861132969 0.438716764724026 0.03782522 0 hPsi_site_14889 iPseU_CNN:0.03782522;iRNA_PseU:0 14890 chr16 55525748 55525748 1 + G A BLCA 55525747 + 55525727 55525767 41 CTCGTGGCAGCCCACGAGTTTGGCCACGCCATGGGGCTGGA CTCGTGGCAGCCCACGAGTTTAGCCACGCCATGGGGCTGGA < 41bp 0.4461329759847 0.85499775910241 0.29987288 0.3830724 prediction 0.709995518204819 Functional Gain - MMP2 ENSG00000087245 CDS Human protein_coding chr16:55525747 chr16:55525748 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21166 0 0 0 0 0 Endoplasmic reticulum 0.438718595039299 0.438837857260201 0 0 hPsi_site_14890 iPseU_CNN:0;iRNA_PseU:0 14891 chr22 23230402 23230402 1 + G A DLBC 23230401 + 23230381 23230421 41 CCAGACCCTGGAGCCTCAGTTGGAAGCAGCCGATCCAGCCT CCAGACCCTGGAGCCTCAGTTAGAAGCAGCCGATCCAGCCT < 41bp 0.490603947896921 0.854996245073512 0.65966815 0.8744328 prediction 0.709992490147025 Functional Gain - IGLL5 ENSG00000254709 CDS Human protein_coding chr22:23230401 chr22:23230402 nonsynonymous SNV 0.012 1 22 hPsi_associated_SNPs_21167 0 0 0 0 1 exosome 0.43871854946624 0.438718389688851 0.4295293 0 hPsi_site_14891 iPseU_CNN:0.4295293;iRNA_PseU:0 14892 chr14 93398735 93398735 1 + G A LUAD 93398734 + 93398714 93398754 41 GGTCGGTCGGAGGCTCTGGCTGTGGATGGAGCTGGGAAGCC GGTCGGTCGGAGGCTCTGGCTATGGATGGAGCTGGGAAGCC < 41bp 0.53282897772026 0.887824848175894 0.21134412 0.38308418 prediction 0.709991740911267 Functional Gain - CHGA ENSG00000100604 CDS Human protein_coding chr14:93398734 chr14:93398735 nonsynonymous SNV 0.068 0 22 hPsi_associated_SNPs_21168 0 0 0 0 1 exosome 0.438716445335361 0.438724478204868 0 0 hPsi_site_14892 iPseU_CNN:0;iRNA_PseU:0 14893 chr17 48433313 48433313 1 + G A UCEC 48433312 + 48433292 48433332 41 GTACACAGATGACCCGCTTGTGGCCCAGCTGCGCCAGTTCT GTACACAGATGACCCGCTTGTAGCCCAGCTGCGCCAGTTCT < 41bp 0.456365678241686 0.854992403493838 0.3076198 0.58977604 prediction 0.709984806987675 Functional Gain - XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433312 chr17:48433313 synonymous SNV . 0 22 hPsi_associated_SNPs_21169 0 0 0 0 1 nucleolus 0.438718592995106 0.438721381889229 0.17955208 0 hPsi_site_14893 iPseU_CNN:0.17955208;iRNA_PseU:0 14894 chr19 8503337 8503337 1 + G A BLCA 8503336 + 8503316 8503356 41 GACCAACCAGAAAGTTCGCCTGAAGATCCGGGAGGCGGACA GACCAACCAGAAAGTTCGCCTAAAGATCCGGGAGGCGGACA < 41bp 0.518079685384367 0.873070673883732 0.29786018 0.4009852 prediction 0.70998197699873 Functional Gain - MARCH2 ENSG00000099785 CDS Human protein_coding chr19:8503336 chr19:8503337 synonymous SNV . 0 22 hPsi_associated_SNPs_21170 0 0 0 0 1 Cytosol 0.438718592930776 0.438718592991808 0 0 hPsi_site_14894 iPseU_CNN:0;iRNA_PseU:0 14895 chr12 8290827 8290827 1 + G A UCEC 8290826 + 8290806 8290846 41 AAAAGATGGGGCTGGAATGATGTTAATTGTCTTGGTCCTCA AAAAGATGGGGCTGGAATGATATTAATTGTCTTGGTCCTCA < 41bp 0.509834279581376 0.864822281911156 0.31555948 0.32924324 prediction 0.70997600465956 Functional Gain - CLEC4A ENSG00000111729 CDS Human protein_coding chr12:8290826 chr12:8290827 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21171 0 0 1 0 1 exosome 0.439199130288142 0.437590121247799 0 0 hPsi_site_14895 iPseU_CNN:0;iRNA_PseU:0 14896 chr17 7951079 7951079 1 + G A HNSC 7951078 + 7951058 7951098 41 TTCAGTTTGACTCCTGTGCTTGGATGCCCAACCTGCCACCC TTCAGTTTGACTCCTGTGCTTAGATGCCCAACCTGCCACCC < 41bp 0.461415528598303 0.854979507514266 0.3207441 0.6353192 prediction 0.709959015028533 Functional Gain - ALOX15B ENSG00000179593 CDS Human protein_coding chr17:7951078 chr17:7951079 stopgain 0.999 1 22 hPsi_associated_SNPs_21172 0 0 0 0 1 exosome 0.438718592995102 0.438718593020251 0.2706384 0 hPsi_site_14896 iPseU_CNN:0.2706384;iRNA_PseU:0 14897 chrX 153629109 153629109 1 + G A BLCA 153629108 + 153629088 153629128 41 GAATTTGAAGACATGGTGGCTGAAAAGCGGCTCATCCCAGA GAATTTGAAGACATGGTGGCTAAAAAGCGGCTCATCCCAGA < 41bp 0.481747125105509 0.85497845692874 0.24910241 0.32797614 prediction 0.70995691385748 Functional Gain - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153629108 chrX:153629109 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_21173 0 0 1 1 1 Cytosol 0.438718582173089 0.438718686144565 0 0 hPsi_site_14897 iPseU_CNN:0;iRNA_PseU:0 14898 chr17 38244737 38244737 1 + G A CESC 38244736 + 38244716 38244756 41 AGTGGCTCTGCTGCAGGCTGTGCTGCTAATGTCAACAGGTA AGTGGCTCTGCTGCAGGCTGTACTGCTAATGTCAACAGGTA < 41bp 0.457078808248806 0.854959593819271 0.24759892 0.757491 prediction 0.709919187638542 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38244736 chr17:38244737 synonymous SNV . 0 22 hPsi_associated_SNPs_21174 0 0 1 0 1 Ribosome 0.437852210402409 0.437990303087244 0.514982 0 hPsi_site_14898 iPseU_CNN:0.514982;iRNA_PseU:0 14899 chr1 150131101 150131101 1 + G A LUAD 150131100 + 150131080 150131120 41 GAGGAACCAACCTCTTGTGCTGAGAGCTTTCGGGTTGACCT GAGGAACCAACCTCTTGTGCTAAGAGCTTTCGGGTTGACCT < 41bp 0.492669367057697 0.854959031942563 0.26412684 0.34394443 prediction 0.709918063885126 Functional Gain - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131100 chr1:150131101 nonsynonymous SNV 0.920 1 22 hPsi_associated_SNPs_21175 0 0 0 0 1 Ribosome 0.438718539964644 0.438718924272665 0 0 hPsi_site_14899 iPseU_CNN:0;iRNA_PseU:0 14900 chrX 135292062 135292062 1 + G A CESC 135292061 + 135292041 135292081 41 GGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGA GGCTCCAGTGTGGTGGCCTATAAAGGACAATCCTGGCACGA < 41bp 0.511028590919161 0.865981327775621 0.3616051 0.7305333 prediction 0.709905473712921 Functional Gain - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135292061 chrX:135292062 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21176 0 0 1 3 0 chromatin 0.438718592989578 0.43871858988699 0.4610666 0 hPsi_site_14900 iPseU_CNN:0.4610666;iRNA_PseU:0 14901 chr5 56177976 56177976 1 + G A PRAD 56177975 + 56177955 56177995 41 CCAATTAATGTTTCCAGCCTTGTCAACCCCTTCTTCTTCTA CCAATTAATGTTTCCAGCCTTATCAACCCCTTCTTCTTCTA < 41bp 0.471248737649227 0.854937938742335 0.27519396 0.39357117 prediction 0.70987587748467 Functional Gain - MAP3K1 ENSG00000095015 CDS Human protein_coding chr5:56177975 chr5:56177976 synonymous SNV . 0 22 hPsi_associated_SNPs_21177 0 0 1 0 0 Cytosol 0.438493478251886 0.438682041778352 0 0 hPsi_site_14901 iPseU_CNN:0;iRNA_PseU:0 14902 chr12 49314775 49314775 1 + G A COAD 49314774 + 49314754 49314794 41 TGAAACCGAAGAAGAAAAAGTGCTGCCTTTTTATTCATCAG TGAAACCGAAGAAGAAAAAGTACTGCCTTTTTATTCATCAG < 41bp 0.468916470986372 0.854932360627478 0.3026396 0.5344401 prediction 0.709864721254957 Functional Gain - CCDC65 ENSG00000139537 CDS Human protein_coding chr12:49314774 chr12:49314775 synonymous SNV . 0 22 hPsi_associated_SNPs_21178 0 0 0 0 1 chromatin 0.43871856914794 0.438717583179891 0.0688801999999999 0 hPsi_site_14902 iPseU_CNN:0.0688801999999999;iRNA_PseU:0 14903 chr10 89692830 89692830 1 + G A GBM 89692829 + 89692809 89692849 41 TAGAACTTATCAAACCCTTTTGTGAAGATCTTGACCAATGG TAGAACTTATCAAACCCTTTTATGAAGATCTTGACCAATGG < 41bp 0.488378561381264 0.854930264348909 0.40183246 0.35168564 prediction 0.709860528697817 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89692829 chr10:89692830 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21179 2 0 0 0 1 Ribosome 0.438305893435907 0.43863985258704 0 0 hPsi_site_14903 iPseU_CNN:0;iRNA_PseU:0 14904 chr6 35280136 35280136 1 + G A CESC 35280135 + 35280115 35280155 41 AGCTTGGAGGTGAGCTTGGGTGAGCTGGAGGAGCTTCTGGC AGCTTGGAGGTGAGCTTGGGTAAGCTGGAGGAGCTTCTGGC < 41bp 0.528827887577564 0.883752926861503 0.36019054 0.39359748 prediction 0.70985007856788 Functional Gain - DEF6 ENSG00000023892 CDS Human protein_coding chr6:35280135 chr6:35280136 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_21180 0 0 0 0 1 Ribosome 0.438718581589076 0.438718593971375 0 0 hPsi_site_14904 iPseU_CNN:0;iRNA_PseU:0 14905 chr17 47299509 47299509 1 + G A ESCA 47299508 + 47299488 47299528 41 CCTCCACCCCTGGATGGAGATGAATTGGGGCTGCCTCCACC CCTCCACCCCTGGATGGAGATAAATTGGGGCTGCCTCCACC < 41bp 0.4606032139963 0.854916352280275 0.21389496 0.36639458 prediction 0.709832704560549 Functional Gain - ABI3 ENSG00000108798 CDS Human protein_coding chr17:47299508 chr17:47299509 nonsynonymous SNV 0.279 0 22 hPsi_associated_SNPs_21181 0 0 0 0 2 exosome 0.438718989187721 0.439391043914151 0 0 hPsi_site_14905 iPseU_CNN:0;iRNA_PseU:0 14906 chr8 128750841 128750841 1 + G A LUSC 128750840 + 128750820 128750860 41 GCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCG GCTGCTGGGAGGAGACATGGTAAACCAGAGTTTCATCTGCG < 41bp 0.455177600782993 0.85490056776969 0.28285572 0.5931362 prediction 0.709801135539379 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128750840 chr8:128750841 synonymous SNV . 0 22 hPsi_associated_SNPs_21182 0 0 1 0 0 Cytosol 0.438679838708938 0.438718582763937 0.1862724 0 hPsi_site_14906 iPseU_CNN:0.1862724;iRNA_PseU:0 14907 chr16 19693631 19693631 1 + G A SKCM 19693630 + 19693610 19693650 41 ACCTGGGAGGACAACAGCGATGAGAAAATCCGCATCTACAC ACCTGGGAGGACAACAGCGATAAGAAAATCCGCATCTACAC < 41bp 0.458343084376067 0.854899445361424 0.28645432 0.3196913 prediction 0.709798890722847 Functional Gain - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19693630 chr16:19693631 nonsynonymous SNV 0.763 1 22 hPsi_associated_SNPs_21183 0 0 0 0 2 Cytosol 0.438717999796078 0.438718219393296 0 0 hPsi_site_14907 iPseU_CNN:0;iRNA_PseU:0 14908 chr3 39172247 39172247 1 + G A SARC 39172246 + 39172226 39172266 41 ATGGACAGGACTTTCTGTGCTGCGATCTGGGCAAACTGCTC ATGGACAGGACTTTCTGTGCTACGATCTGGGCAAACTGCTC < 41bp 0.468004374671244 0.854890003041612 0.24133039 0.3876475 prediction 0.709780006083224 Functional Gain - TTC21A ENSG00000168026 CDS Human protein_coding chr3:39172246 chr3:39172247 nonsynonymous SNV 0.365 0 22 hPsi_associated_SNPs_21184 0 0 0 0 2 nucleus 0.438815859524549 0.438714546116022 0 0 hPsi_site_14908 iPseU_CNN:0;iRNA_PseU:0 14909 chr13 100635185 100635185 1 + G A SARC 100635184 + 100635164 100635204 41 GCTGGTGACACACGTCTCGGTGGAGCACGTCGGCGGCCCGG GCTGGTGACACACGTCTCGGTAGAGCACGTCGGCGGCCCGG < 41bp 0.526260254942988 0.8811494684692 0.3419848 0.93284357 prediction 0.709778427052423 Functional Gain - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100635184 chr13:100635185 synonymous SNV . 0 22 hPsi_associated_SNPs_21185 0 0 1 0 0 Cytosol 0.439030974542834 0.438719085100475 0.86568714 0 hPsi_site_14909 iPseU_CNN:0.86568714;iRNA_PseU:0 14910 chr11 49974506 49974506 1 + G A LUAD 49974505 + 49974485 49974525 41 GTCATAGATCACTTTATGTGTGATCTCTACACTTTGATCAA GTCATAGATCACTTTATGTGTAATCTCTACACTTTGATCAA < 41bp 0.495884678335222 0.854884494870284 0.1874519 0.2916486 prediction 0.709768989740569 Functional Gain - OR4C13 ENSG00000258817 CDS Human protein_coding chr11:49974505 chr11:49974506 nonsynonymous SNV 0.097 4 22 hPsi_associated_SNPs_21186 0 0 0 0 0 unknown 0.441798540072582 0.438452563956178 0 0 hPsi_site_14910 iPseU_CNN:0;iRNA_PseU:0 14911 chr10 103899212 103899212 1 + G A UCEC 103899211 + 103899191 103899231 41 TGCGGGCCATGCACCCATACTGCCTGCCCAACCTCACCCAC TGCGGGCCATGCACCCATACTACCTGCCCAACCTCACCCAC < 41bp 0.524296968251563 0.879174768551831 0.3036909 0.69095063 prediction 0.709755600600537 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103899211 chr10:103899212 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_21187 0 0 1 0 0 Cytosol 0.438717422699714 0.438709070469598 0.38190126 0 hPsi_site_14911 iPseU_CNN:0.38190126;iRNA_PseU:0 14912 chr6 27115099 27115099 1 + G A SKCM 27115098 + 27115078 27115118 41 GTACCTGACCGCTGAGATCCTGGAGCTGGCTGGCAATGCGG GTACCTGACCGCTGAGATCCTAGAGCTGGCTGGCAATGCGG < 41bp 0.507412070469107 0.862287658385585 0.1394862 0.27203766 prediction 0.709751175832955 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115098 chr6:27115099 synonymous SNV . 0 22 hPsi_associated_SNPs_21188 0 0 1 0 0 cytosol 0.438718592995629 0.438718593800643 0 0 hPsi_site_14912 iPseU_CNN:0;iRNA_PseU:0 14913 chr6 137193359 137193359 1 + G A ACC 137193358 + 137193338 137193378 41 TTCACCATTTCATGCTTCTGTGCTGGCCTCTTGCTCGTATG TTCACCATTTCATGCTTCTGTACTGGCCTCTTGCTCGTATG < 41bp 0.513309123540557 0.868183192261273 0.25990587 0.5821901 prediction 0.709748137441432 Functional Gain - PEX7 ENSG00000112357 CDS Human protein_coding chr6:137193358 chr6:137193359 synonymous SNV . 0 22 hPsi_associated_SNPs_21189 0 0 1 2 2 Ribosome 0.439251345441366 0.439776712010784 0.1643802 0 hPsi_site_14913 iPseU_CNN:0.1643802;iRNA_PseU:0 14914 chr16 633346 633346 1 + C T ESCA 633347 - 633327 633367 41 CTGGACCTGGGTACACAGGGTGGGCATGGGGCAGTGCTCTG CTGGACCTGGGTACACAGGGTAGGCATGGGGCAGTGCTCTG < 41bp 0.49917355220021 0.854854289171714 0.29238096 0.8373499 prediction 0.709708578343427 Functional Gain - PIGQ ENSG00000007541 CDS Human protein_coding chr16:633347 chr16:633346 synonymous SNV . 0 22 hPsi_associated_SNPs_21190 0 0 0 0 0 Ribosome 0.438718373948746 0.438716903049523 0.6746998 0 hPsi_site_14914 iPseU_CNN:0.6746998;iRNA_PseU:0 14915 chr3 26751183 26751183 1 + G A HNSC 26751182 + 26751162 26751202 41 GCATGAATCTGGTAGACCTGTGGTTAACCCGTTCCCTCTCC GCATGAATCTGGTAGACCTGTAGTTAACCCGTTCCCTCTCC < 41bp 0.484149197296553 0.854849449529487 0.28751343 0.62584096 prediction 0.709698899058973 Functional Gain - LRRC3B ENSG00000179796 CDS Human protein_coding chr3:26751182 chr3:26751183 stopgain 0.991 0 22 hPsi_associated_SNPs_21191 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.25168192 0 hPsi_site_14915 iPseU_CNN:0.25168192;iRNA_PseU:0 14916 chr14 21469216 21469216 1 + G A UCEC 21469215 + 21469195 21469235 41 GGCTGCTGGAGGATCGACAGTGCAGGACGAAGAATGGGGTG GGCTGCTGGAGGATCGACAGTACAGGACGAAGAATGGGGTG < 41bp 0.460739655311182 0.854844667800574 0.31795922 0.4599259 prediction 0.709689335601149 Functional Gain - SLC39A2 ENSG00000165794 CDS Human protein_coding chr14:21469215 chr14:21469216 synonymous SNV . 0 22 hPsi_associated_SNPs_21192 0 0 0 0 0 exosome 0.438718592993756 0.438718591544262 0 0 hPsi_site_14916 iPseU_CNN:0;iRNA_PseU:0 14917 chr9 130241761 130241761 1 + G A BLCA 130241760 + 130241740 130241780 41 CAGAGCAGCAGCCAGAAGGATGAGATCCTTCAGACGGTCAA CAGAGCAGCAGCCAGAAGGATAAGATCCTTCAGACGGTCAA < 41bp 0.534135065927204 0.888975002907827 0.29201192 0.66629076 prediction 0.709679873961246 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130241760 chr9:130241761 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_21193 0 0 0 0 1 chromatin 0.43465368402318 0.43876520942788 0.33258152 0 hPsi_site_14917 iPseU_CNN:0.33258152;iRNA_PseU:0 14918 chr11 63974848 63974848 1 + G A CESC 63974847 + 63974827 63974867 41 AGCCGCAGCCATGGCGGGGATGAAGACAGCCTCCGGGGACT AGCCGCAGCCATGGCGGGGATAAAGACAGCCTCCGGGGACT < 41bp 0.472524771888822 0.854839116070863 0.39492565 0.6625894 prediction 0.709678232141726 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63974847 chr11:63974848 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21194 0 0 1 0 1 Cytosol 0.438717590419434 0.438719063322923 0.3251788 0 hPsi_site_14918 iPseU_CNN:0.3251788;iRNA_PseU:0 14919 chr19 3938653 3938653 1 + G A BRCA 3938652 + 3938632 3938672 41 GGACACCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTG GGACACCGTGCAGGCCTGGCTAAGCAGCCCGCAGAAGTTTG < 41bp 0.530578367171179 0.885416630220398 0.22247854 0.2880922 prediction 0.709676526098438 Functional Gain - NMRK2 ENSG00000077009 CDS Human protein_coding chr19:3938652 chr19:3938653 synonymous SNV . 0 22 hPsi_associated_SNPs_21195 0 0 0 0 1 exosome 0.438718948066005 0.438718592933392 0 0 hPsi_site_14919 iPseU_CNN:0;iRNA_PseU:0 14920 chr1 45809017 45809017 1 + G A rs149142910 45809016 + 45808996 45809036 41 TGCCGATGAAACTAGGAACCTGCCTCACTCCAAGCAAGGCA TGCCGATGAAACTAGGAACCTACCTCACTCCAAGCAAGGCA < 41bp 0.480334907709523 0.85482860233845 0.33449778 0.7375643 prediction 0.709657204676899 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45809016 chr1:45809017 synonymous SNV . 0 22 hPsi_associated_SNPs_21196 0 0 0 0 0 Ribosome 0.438718592995102 0.438718592995102 0.4751286 0 hPsi_site_14920 iPseU_CNN:0.4751286;iRNA_PseU:0 14921 chr8 42019900 42019900 1 + G A LUAD 42019899 + 42019879 42019919 41 AACAATGAGGCCTATTTTGATGTGATTGAAGAGATTGATGC AACAATGAGGCCTATTTTGATATGATTGAAGAGATTGATGC < 41bp 0.466913710645086 0.854820294593106 0.33200663 0.4434124 prediction 0.709640589186211 Functional Gain - AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42019899 chr8:42019900 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_21197 0 0 1 1 1 Nucleus 0.438718585632886 0.438718574025487 0 0 hPsi_site_14921 iPseU_CNN:0;iRNA_PseU:0 14922 chr11 65408600 65408600 1 + G A STAD 65408599 + 65408579 65408619 41 CCCACGCCAGCCAGCCCCCGTGCCCGTGCCCACAGCCACGA CCCACGCCAGCCAGCCCCCGTACCCGTGCCCACAGCCACGA < 41bp 0.467456301116511 0.854819333951056 0.28587937 0.6623949 prediction 0.709638667902112 Functional Gain - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408599 chr11:65408600 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_21198 0 0 0 0 0 Ribosome 0.438718480438914 0.438718440403484 0.3247898 0 hPsi_site_14922 iPseU_CNN:0.3247898;iRNA_PseU:0 14923 chr8 22020665 22020665 1 + G A SARC 22020664 + 22020644 22020684 41 AGTGAGCACCTGGTTACCACTGCCACCTTCTCCATCGGCTC AGTGAGCACCTGGTTACCACTACCACCTTCTCCATCGGCTC < 41bp 0.533096123408672 0.887911066819911 0.18725675 0.32268763 prediction 0.709629886822479 Functional Gain - SFTPC ENSG00000168484 CDS Human protein_coding chr8:22020664 chr8:22020665 nonsynonymous SNV 0.698 4 22 hPsi_associated_SNPs_21199 0 0 0 0 2 Cytosol 0.438718617636524 0.43871857253378 0 0 hPsi_site_14923 iPseU_CNN:0;iRNA_PseU:0 14924 chr11 92715180 92715180 1 + G A LUAD 92715179 + 92715159 92715199 41 TTGTGATCTTTGCCATCTGCTGGGCTCCACTTAACTGCATC TTGTGATCTTTGCCATCTGCTAGGCTCCACTTAACTGCATC < 41bp 0.470945991354992 0.854810788341389 0.20589632 0.3510623 prediction 0.709621576682778 Functional Gain - MTNR1B ENSG00000134640 CDS Human protein_coding chr11:92715179 chr11:92715180 stopgain 0.233 1 22 hPsi_associated_SNPs_21200 0 0 0 0 0 unknown 0.437323414658633 0.438721472727133 0 0 hPsi_site_14924 iPseU_CNN:0;iRNA_PseU:0 14925 chr16 78064682 78064682 1 + G A BRCA 78064681 + 78064661 78064701 41 TCAGCTCAGGGCAAGTGGAGTGATGAGGCCTGTCGCAGCAG TCAGCTCAGGGCAAGTGGAGTAATGAGGCCTGTCGCAGCAG < 41bp 0.514854827462845 0.86966098706442 0.27539903 0.7452723 prediction 0.709612319203151 Functional Gain - CLEC3A ENSG00000166509 CDS Human protein_coding chr16:78064681 chr16:78064682 nonsynonymous SNV 0.705 3 22 hPsi_associated_SNPs_21201 0 0 0 0 0 unknown 0.438724764284522 0.438718390756295 0.4905446 0 hPsi_site_14925 iPseU_CNN:0.4905446;iRNA_PseU:0 14926 chr15 79760670 79760670 1 + G A BRCA 79760669 + 79760649 79760689 41 ATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCT ATAGCTGCTCTGATCGCTGCTACGGCATGCACCGTCATCCT < 41bp 0.52495556879211 0.879758610315222 0.14748064 0.2173981 prediction 0.709606083046225 Functional Gain - KIAA1024 ENSG00000169330 CDS Human protein_coding chr15:79760669 chr15:79760670 nonsynonymous SNV 0.022 3 22 hPsi_associated_SNPs_21202 0 0 0 0 0 cytosol 0.438810018377219 0.441571825815792 0 0 hPsi_site_14926 iPseU_CNN:0;iRNA_PseU:0 14927 chr10 5951217 5951217 1 + G A UCEC 5951216 + 5951196 5951236 41 TCCTCCCCGAGGCTGAGGCGTGTGTGCGGCAACACCTCCCC TCCTCCCCGAGGCTGAGGCGTATGTGCGGCAACACCTCCCC < 41bp 0.537589020550967 0.892388095784383 0.3020511 0.63159984 prediction 0.709598150466832 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951216 chr10:5951217 nonsynonymous SNV 0.004 4 22 hPsi_associated_SNPs_21203 0 0 1 0 2 Ribosome 0.438718623003749 0.438718595656605 0.26319968 0 hPsi_site_14927 iPseU_CNN:0.26319968;iRNA_PseU:0 14928 chr11 57982600 57982600 1 + G A BRCA 57982599 + 57982579 57982619 41 CGTCATTGACAATTTGCTCTTGGGGACCATGGCCTATGACC CGTCATTGACAATTTGCTCTTAGGGACCATGGCCTATGACC < 41bp 0.515075830478354 0.869871234910788 0.2678965 0.34054497 prediction 0.709590808864869 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57982599 chr11:57982600 synonymous SNV . 0 22 hPsi_associated_SNPs_21204 0 0 0 0 0 unknown 0.438711640813939 0.438576710343821 0 0 hPsi_site_14928 iPseU_CNN:0;iRNA_PseU:0 14929 chr11 60201289 60201289 1 + G A rs147206734 60201288 + 60201268 60201308 41 AGTGCCCTGGGAGCAATAGCTGGAATCATTCTCCTCACATT AGTGCCCTGGGAGCAATAGCTAGAATCATTCTCCTCACATT < 41bp 0.484689251748137 0.854780713126067 0.32530695 0.7033807 prediction 0.709561426252134 Functional Gain - MS4A5 ENSG00000166930 CDS Human protein_coding chr11:60201288 chr11:60201289 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_21205 0 0 0 0 1 unknown 0.438718591075916 0.438718572643463 0.4067614 0 hPsi_site_14929 iPseU_CNN:0.4067614;iRNA_PseU:0 14930 chr2 7179763 7179763 1 + G A BRCA 7179762 + 7179742 7179782 41 TTTGTTTCTTTCTTCCAGGTTGTGGGCATTTTTGCAGGATT TTTGTTTCTTTCTTCCAGGTTATGGGCATTTTTGCAGGATT < 41bp 0.496945738971923 0.854768303011968 0.18470126 0.23784852 prediction 0.709536606023937 Functional Gain - RNF144A ENSG00000151692 CDS Human protein_coding chr2:7179762 chr2:7179763 nonsynonymous SNV 0.932 4 22 hPsi_associated_SNPs_21206 0 0 1 0 1 Nucleus 0.438718622913233 0.438718565234151 0 0 hPsi_site_14930 iPseU_CNN:0;iRNA_PseU:0 14931 chr19 8953661 8953661 1 + G A SKCM 8953660 + 8953640 8953680 41 CTTGTCCCTAGTTACACAGGTGGATCTCTGCTGGAGGATCT CTTGTCCCTAGTTACACAGGTAGATCTCTGCTGGAGGATCT < 41bp 0.492261867616922 0.8547644967834 0.32162064 0.5756381 prediction 0.709528993566799 Functional Gain - MBD3L1 ENSG00000170948 CDS Human protein_coding chr19:8953660 chr19:8953661 nonsynonymous SNV 0.036 0 22 hPsi_associated_SNPs_21207 0 0 0 0 0 nucleus 0.438718592995102 0.43871859299391 0.1512762 0 hPsi_site_14931 iPseU_CNN:0.1512762;iRNA_PseU:0 14932 chr1 201965291 201965291 1 + G A BLCA 201965290 + 201965270 201965310 41 TTTAGGAGCCGGGTGTGGGCTGAGCCCTGCCTGATTGATGC TTTAGGAGCCGGGTGTGGGCTAAGCCCTGCCTGATTGATGC < 41bp 0.460174046344436 0.854763834916741 0.24857962 0.406522 prediction 0.709527669833482 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201965290 chr1:201965291 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_21208 0 0 1 0 1 Ribosome 0.438718592607169 0.438718592995092 0 0 hPsi_site_14932 iPseU_CNN:0;iRNA_PseU:0 14933 chr2 132021178 132021178 1 + G A rs572380570 132021177 + 132021157 132021197 41 TTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCGGGC TTGACAACGGCTCTGGCATGTACAAGGCCGGCTTTGCGGGC < 41bp 0.520430985503799 0.87519427912627 0.4000271 0.8685793 prediction 0.709526587244943 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021177 chr2:132021178 nonsynonymous SNV 0.049 4 22 hPsi_associated_SNPs_21209 0 0 0 0 0 chromatin 0.4387185929951 0.438718592995158 0.7371586 0 hPsi_site_14933 iPseU_CNN:0.7371586;iRNA_PseU:0 14934 chr19 48229277 48229277 1 + G A UCEC 48229276 + 48229256 48229296 41 GCGCGTCTACGGCGCGCTCATGTGGGCGCTGGGCAAGGTGG GCGCGTCTACGGCGCGCTCATATGGGCGCTGGGCAAGGTGG < 41bp 0.469257226008788 0.854762257531147 0.32173574 0.517356 prediction 0.709524515062295 Functional Gain - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48229276 chr19:48229277 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21210 0 0 0 0 0 Nucleus 0.438711709205996 0.438718031740019 0.0347120000000001 0 hPsi_site_14934 iPseU_CNN:0.0347120000000001;iRNA_PseU:0 14935 chr5 147040544 147040544 1 + G A SKCM 147040543 + 147040523 147040563 41 ATCCCGCTCCGACTCCCACTTGATCTTCGAGATGGCTTCTT ATCCCGCTCCGACTCCCACTTAATCTTCGAGATGGCTTCTT < 41bp 0.523707282811549 0.878456286463244 0.2162815 0.50044805 prediction 0.70949800730339 Functional Gain - JAKMIP2 ENSG00000176049 CDS Human protein_coding chr5:147040543 chr5:147040544 synonymous SNV . 0 22 hPsi_associated_SNPs_21211 0 0 0 1 0 Endoplasmic reticulum 0.438718596319016 0.438717795830654 0.000896100000000066 0 hPsi_site_14935 iPseU_CNN:0.000896100000000066;iRNA_PseU:0 14936 chr19 1079959 1079959 1 + G A rs36084354 1079958 + 1079938 1079978 41 CTACTACCAGATGATGCATATGCAGACGGCGCCGCTGCCCG CTACTACCAGATGATGCATATACAGACGGCGCCGCTGCCCG < 41bp 0.454773257972898 0.854743128141537 0.5086542 0.75874835 prediction 0.709486256283075 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1079958 chr19:1079959 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21212 0 1 1 0 1 chromatin 0.438744848810369 0.438699291937783 0.5001883 0 hPsi_site_14936 iPseU_CNN:0.5001883;iRNA_PseU:0 14937 chr15 45453997 45453997 1 + G A BRCA 45453996 + 45453976 45454016 41 GTACAAGTCAGGGCAGTGGGTGCGGATCGCTTGCCTGGCTC GTACAAGTCAGGGCAGTGGGTACGGATCGCTTGCCTGGCTC < 41bp 0.533322475397956 0.888060748999762 0.30158585 0.8108746 prediction 0.709476547203612 Functional Gain - DUOX1 ENSG00000137857 CDS Human protein_coding chr15:45453996 chr15:45453997 synonymous SNV . 0 22 hPsi_associated_SNPs_21213 0 0 0 0 1 chromatin 0.438718003893776 0.438519735492187 0.6217492 0 hPsi_site_14937 iPseU_CNN:0.6217492;iRNA_PseU:0 14938 chr18 3253957 3253957 1 + G A UCEC 3253956 + 3253936 3253976 41 AGGCCCCATCAATTTCACCATGTTCCTCACCATGTTTGGTG AGGCCCCATCAATTTCACCATATTCCTCACCATGTTTGGTG < 41bp 0.463850296329032 0.854736028154433 0.25201008 0.44461206 prediction 0.709472056308865 Functional Gain - MYL12A ENSG00000101608 CDS Human protein_coding chr18:3253956 chr18:3253957 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21214 0 0 1 0 2 Ribosome 0.438717104304302 0.438667994426629 0 0 hPsi_site_14938 iPseU_CNN:0;iRNA_PseU:0 14939 chr1 35226994 35226994 1 + G A HNSC 35226993 + 35226973 35227013 41 GCGGAGGAGGTGTGGGACGATGAGCAGAAGGACTTTGTCTG GCGGAGGAGGTGTGGGACGATAAGCAGAAGGACTTTGTCTG < 41bp 0.463510431663257 0.85472621102848 0.25608003 0.3237115 prediction 0.70945242205696 Functional Gain - GJB4 ENSG00000189433 CDS Human protein_coding chr1:35226993 chr1:35226994 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_21215 0 0 0 0 0 exosome 0.438717836329042 0.438711524048579 0 0 hPsi_site_14939 iPseU_CNN:0;iRNA_PseU:0 14940 chr5 118728636 118728636 1 + G A CESC 118728635 + 118728615 118728655 41 ACAAGTAGTGAGGTGCTGGATGAGCTCTACAGAGTGACCAG ACAAGTAGTGAGGTGCTGGATAAGCTCTACAGAGTGACCAG < 41bp 0.515242705685232 0.869966103403413 0.42677853 0.81229067 prediction 0.709446795436363 Functional Gain - TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118728635 chr5:118728636 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_21216 0 0 1 0 0 Cytosol 0.438712808748583 0.438765144834098 0.62458134 0 hPsi_site_14940 iPseU_CNN:0.62458134;iRNA_PseU:0 14941 chr5 137802862 137802862 1 + G A STAD 137802861 + 137802841 137802881 41 TACCCGCCTCCTGCCTACCCTGCCGCCAAGGGTGGCTTCCA TACCCGCCTCCTGCCTACCCTACCGCCAAGGGTGGCTTCCA < 41bp 0.468719233101454 0.854711196355785 0.2761293 0.72846 prediction 0.70942239271157 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137802861 chr5:137802862 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_21217 0 0 1 0 0 Cytosol 0.438718592880749 0.438718602804549 0.45692 0 hPsi_site_14941 iPseU_CNN:0.45692;iRNA_PseU:0 14942 chr16 1129258 1129258 1 + G A COAD 1129257 + 1129237 1129277 41 GTTCACCAGTGTCTTCTGCCTGACAGTCATGAGCGTGGACC GTTCACCAGTGTCTTCTGCCTAACAGTCATGAGCGTGGACC < 41bp 0.508241413149786 0.862952328421729 0.243085 0.37209415 prediction 0.709421830543887 Functional Gain - SSTR5 ENSG00000162009 CDS Human protein_coding chr16:1129257 chr16:1129258 synonymous SNV . 0 22 hPsi_associated_SNPs_21218 0 0 0 0 0 exosome 0.438665476455158 0.434103541419425 0 0 hPsi_site_14942 iPseU_CNN:0;iRNA_PseU:0 14943 chr22 38029229 38029229 1 + G A rs188413658 38029228 + 38029208 38029248 41 CAGCTATTTGCACTCTGGTGTGTGGTTTGACTCTGCTTTTC CAGCTATTTGCACTCTGGTGTATGGTTTGACTCTGCTTTTC < 41bp 0.490177147227849 0.85470866454363 0.8831198 0.852247 prediction 0.709417329087261 Functional Gain - GGA1 ENSG00000100083 UTR3 Human protein_coding chr22:38029228 chr22:38029229 . . 0 22 hPsi_associated_SNPs_21219 0 0 1 2 0 chromatin 0.438965285503177 0.438813188726176 0 0 hPsi_site_14943 iPseU_CNN:0;iRNA_PseU:0 14944 chr3 46414529 46414529 1 + G A rs41425744 46414528 + 46414508 46414548 41 CTGGTGTTCATCTTTGGTTTTGTGGGCAACATGCTGGTCAT CTGGTGTTCATCTTTGGTTTTATGGGCAACATGCTGGTCAT < 41bp 0.473467929098919 0.854697376803114 0.7258126 0.70908153 prediction 0.709394753606228 Functional Gain - CCR5 ENSG00000160791 CDS Human protein_coding chr3:46414528 chr3:46414529 nonsynonymous SNV 0.769 2 22 hPsi_associated_SNPs_21220 0 0 0 0 0 exosome 0.438725690664495 0.438719369985155 0 0 hPsi_site_14944 iPseU_CNN:0;iRNA_PseU:0 14945 chr11 123900834 123900834 1 + G A GBM 123900833 + 123900813 123900853 41 ACTTTCCATTTGCCCTACTGTGGACCCAACTGGATCCAGCA ACTTTCCATTTGCCCTACTGTAGACCCAACTGGATCCAGCA < 41bp 0.491061935063774 0.854689801667918 0.3291356 0.6938727 prediction 0.709379603335836 Functional Gain - OR10G8 ENSG00000234560 CDS Human protein_coding chr11:123900833 chr11:123900834 nonsynonymous SNV 0.592 4 22 hPsi_associated_SNPs_21221 0 0 0 0 0 unknown 0.438826777571358 0.438742789321832 0.3877454 0 hPsi_site_14945 iPseU_CNN:0.3877454;iRNA_PseU:0 14946 chr1 53358503 53358503 1 + G A UCEC 53358502 + 53358482 53358522 41 AGAAGAAGGATTGCAGCTTTTGTGTGATATCCAGGAGCACA AGAAGAAGGATTGCAGCTTTTATGTGATATCCAGGAGCACA < 41bp 0.515770336447536 0.870458043317065 0.57538724 0.7331718 prediction 0.709375413739058 Functional Gain - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53358502 chr1:53358503 synonymous SNV . 0 22 hPsi_associated_SNPs_21222 0 0 1 0 1 chromatin 0.438699853491748 0.438704507799963 0.31556912 0 hPsi_site_14946 iPseU_CNN:0.31556912;iRNA_PseU:0 14947 chr3 50220954 50220954 1 + G A SKCM 50220953 + 50220933 50220973 41 AAGAGGGGCCCAACTACCAGTGGATGCCCTTCTCAGGGAAG AAGAGGGGCCCAACTACCAGTAGATGCCCTTCTCAGGGAAG < 41bp 0.533195303247195 0.887870214179832 0.3110147 0.5305334 prediction 0.709349821865275 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50220953 chr3:50220954 stopgain 1.000 1 22 hPsi_associated_SNPs_21223 0 0 0 0 1 Endoplasmic reticulum 0.4387185929951 0.438718592995102 0.0610668000000001 0 hPsi_site_14947 iPseU_CNN:0.0610668000000001;iRNA_PseU:0 14948 chr12 54405015 54405015 1 + G A CESC 54405014 + 54404994 54405034 41 GGGACTGACCGAGAGACAAGTGAAGATCTGGTTCCAGAACC GGGACTGACCGAGAGACAAGTAAAGATCTGGTTCCAGAACC < 41bp 0.496464602457883 0.854653240974225 0.2762343 0.40003002 prediction 0.70930648194845 Functional Gain - HOXC8 ENSG00000037965 CDS Human protein_coding chr12:54405014 chr12:54405015 synonymous SNV . 0 22 hPsi_associated_SNPs_21224 0 0 1 0 0 exosome 0.43871623195062 0.438717217381644 0 0 hPsi_site_14948 iPseU_CNN:0;iRNA_PseU:0 14949 chr1 159175630 159175630 1 + G A PRAD 159175629 + 159175609 159175649 41 CCCTGTGTAGCCTGGGCTACTGTGTCTGGTATGGCTCAGCC CCCTGTGTAGCCTGGGCTACTATGTCTGGTATGGCTCAGCC < 41bp 0.469002242866922 0.854651882642344 0.18310195 0.2755999 prediction 0.709303765284687 Functional Gain - ACKR1 ENSG00000213088 CDS Human protein_coding chr1:159175629 chr1:159175630 nonsynonymous SNV 0.023 0 22 hPsi_associated_SNPs_21225 0 0 0 0 0 Endoplasmic reticulum 0.438719206169636 0.438718778405523 0 0 hPsi_site_14949 iPseU_CNN:0;iRNA_PseU:0 14950 chr22 50962600 50962600 1 + C T LUAD 50962601 - 50962581 50962621 41 GCCTGGCTGGCCCTGAGGGCTGAGAAGGAGAGGCTGCAGCA GCCTGGCTGGCCCTGAGGGCTAAGAAGGAGAGGCTGCAGCA < 41bp 0.515442778224613 0.870087080732733 0.1930415 0.32988074 prediction 0.709288605016239 Functional Gain - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962601 chr22:50962600 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_21226 0 0 0 0 0 Ribosome 0.43871867753713 0.438718875370543 0 0 hPsi_site_14950 iPseU_CNN:0;iRNA_PseU:0 14951 chr17 7751404 7751404 1 + G A UCEC 7751403 + 7751383 7751423 41 AACCCCCAGGACCCACCTCTTGTACCCCTGACTCTTGCCCT AACCCCCAGGACCCACCTCTTATACCCCTGACTCTTGCCCT < 41bp 0.533154972875822 0.887796837541432 0.3029455 0.57276857 prediction 0.709283729331221 Functional Gain - KDM6B ENSG00000132510 CDS Human protein_coding chr17:7751403 chr17:7751404 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_21227 0 0 1 0 0 Cytosol 0.436948062067729 0.43866134902301 0.14553714 0 hPsi_site_14951 iPseU_CNN:0.14553714;iRNA_PseU:0 14952 chr1 248637521 248637521 1 + G A SKCM 248637520 + 248637500 248637540 41 CACCATCTTCACTCCTGTGCTGAACCCCCTCATTTACAGTC CACCATCTTCACTCCTGTGCTAAACCCCCTCATTTACAGTC < 41bp 0.500106244946243 0.854720599589791 0.31705496 0.64093834 prediction 0.709228709287095 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248637520 chr1:248637521 synonymous SNV . 0 22 hPsi_associated_SNPs_21228 0 0 0 0 0 unknown 0.438716757185885 0.438727537326195 0.28187668 0 hPsi_site_14952 iPseU_CNN:0.28187668;iRNA_PseU:0 14953 chrX 281827 281827 1 + G A rs139983199 281826 + 281806 281846 41 AAATGTAGCCACCGTTTACATGTCGGGAGGCTGAGGTGGGA AAATGTAGCCACCGTTTACATATCGGGAGGCTGAGGTGGGA < 41bp 0.502066098307272 0.85668043404427 0.26173353 0.316789 prediction 0.709228671473996 Functional Gain - LINC00685 ENSG00000226179 ncRNA_exonic Human antisense chrX:281826 chrX:281827 . . 0 22 hPsi_associated_SNPs_21229 0 0 1 0 0 unknown 0.438718593102388 0.43871859299887 0 0 hPsi_site_14953 iPseU_CNN:0;iRNA_PseU:0 14954 chr9 139744960 139744960 1 + G A CESC 139744959 + 139744939 139744979 41 TCACAAAAACCACCAGCAGATGAGACCCACGTGCGTCCCTC TCACAAAAACCACCAGCAGATAAGACCCACGTGCGTCCCTC < 41bp 0.50859923630066 0.863212199656874 0.52117586 0.8578114 prediction 0.709225926712428 Functional Gain - PHPT1 ENSG00000054148 CDS Human protein_coding chr9:139744959 chr9:139744960 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_21230 0 0 1 0 2 Ribosome 0.438517448096528 0.438718609941322 0.67327108 0 hPsi_site_14954 iPseU_CNN:0.67327108;iRNA_PseU:0 14955 chr1 43162869 43162869 1 + G A GBM 43162868 + 43162848 43162888 41 CAGGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACC CAGGGTGCTGACAACCAGGGTACAGGAGAACAAGGTAGACC < 41bp 0.467383567757961 0.854608715216003 0.163995 0.55013025 prediction 0.709217430432007 Functional Gain - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43162868 chr1:43162869 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21231 0 0 1 0 1 Cytosol 0.438718582482879 0.438718828218359 0.1002605 0 hPsi_site_14955 iPseU_CNN:0.1002605;iRNA_PseU:0 14956 chr1 54562078 54562078 1 + G A KIRC 54562077 + 54562057 54562097 41 TTCACATTAAAGCACCGAGCTGAAATCCGGGCTCAGGTGAA TTCACATTAAAGCACCGAGCTAAAATCCGGGCTCAGGTGAA < 41bp 0.519148117904625 0.873752502230041 0.3637538 0.5996755 prediction 0.70920876865083 Functional Gain - TCEANC2 ENSG00000116205 CDS Human protein_coding chr1:54562077 chr1:54562078 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21232 0 0 0 0 0 chromatin 0.438723986682926 0.4387189719906 0.199351 0 hPsi_site_14956 iPseU_CNN:0.199351;iRNA_PseU:0 14957 chr8 123966220 123966220 1 + G A BLCA 123966219 + 123966199 123966239 41 GAAGGTGTGTCGGAACTGGCTGAATCAGACTCCGACTGCGT GAAGGTGTGTCGGAACTGGCTAAATCAGACTCCGACTGCGT < 41bp 0.486858903265525 0.854599580505209 0.56863576 0.8607655 prediction 0.709199161010418 Functional Gain - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123966219 chr8:123966220 nonsynonymous SNV 0.078 0 22 hPsi_associated_SNPs_21233 0 0 1 0 1 Nucleus 0.428024460887648 0.487937607058268 0.58425948 0 hPsi_site_14957 iPseU_CNN:0.58425948;iRNA_PseU:0 14958 chr5 79368185 79368185 1 + G A COAD 79368184 + 79368164 79368204 41 GTGATGGTGTGGGGGATGCCTGTGACAGTTGTCCTGATGTC GTGATGGTGTGGGGGATGCCTATGACAGTTGTCCTGATGTC < 41bp 0.477980371005206 0.85459575121111 0.186964 0.3039323 prediction 0.70919150242222 Functional Gain - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79368184 chr5:79368185 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21234 0 0 0 0 2 exosome 0.438754818451877 0.438864004916726 0 0 hPsi_site_14958 iPseU_CNN:0;iRNA_PseU:0 14959 chr7 142919594 142919594 1 + G A CESC 142919593 + 142919573 142919613 41 GAAGAGGAAAATCATAGTGCTGATGCCTTGGCTTCTCAGGC GAAGAGGAAAATCATAGTGCTAATGCCTTGGCTTCTCAGGC < 41bp 0.513137430394222 0.867723808712874 0.25862145 0.27206963 prediction 0.709172756637304 Functional Gain - TAS2R40 ENSG00000221937 CDS Human protein_coding chr7:142919593 chr7:142919594 synonymous SNV . 0 22 hPsi_associated_SNPs_21235 0 0 0 0 0 unknown 0.438718586145545 0.438718593036105 0 0 hPsi_site_14959 iPseU_CNN:0;iRNA_PseU:0 14960 chr4 40245307 40245307 1 + G A SKCM 40245306 + 40245286 40245326 41 TTGAAGAACAAGTGGATTGGTGAAATTAGGAGCAACTTGCC TTGAAGAACAAGTGGATTGGTAAAATTAGGAGCAACTTGCC < 41bp 0.530199504675677 0.88478446468019 0.27540052 0.6108708 prediction 0.709169920009025 Functional Gain - RHOH ENSG00000168421 CDS Human protein_coding chr4:40245306 chr4:40245307 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_21236 0 0 0 0 0 Cytosol 0.438209146600012 0.438718601496415 0.2217416 0 hPsi_site_14960 iPseU_CNN:0.2217416;iRNA_PseU:0 14961 chr1 1372425 1372425 1 + G A UCEC 1372424 + 1372404 1372444 41 GGGGCAGCTGGTGGCTCCACTGCCCCTGGGCACCGGGGCCC GGGGCAGCTGGTGGCTCCACTACCCCTGGGCACCGGGGCCC < 41bp 0.465399824488628 0.854570020756707 0.21134344 0.6518338 prediction 0.709140041513413 Functional Gain - VWA1 ENSG00000179403 CDS Human protein_coding chr1:1372424 chr1:1372425 synonymous SNV . 0 22 hPsi_associated_SNPs_21237 0 0 1 0 0 Ribosome 0.438734195272168 0.439830227443286 0.3036676 0 hPsi_site_14961 iPseU_CNN:0.3036676;iRNA_PseU:0 14962 chr7 107399212 107399212 1 + G A UCEC 107399211 + 107399191 107399231 41 ACCACCAATAAGCCATCCAATGCCACATCCTCCCCAGGCTG ACCACCAATAAGCCATCCAATACCACATCCTCCCCAGGCTG < 41bp 0.474480469616346 0.854551886693796 0.21163696 0.39987218 prediction 0.709103773387593 Functional Gain - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107399211 chr7:107399212 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21238 0 0 1 0 0 cytosol 0.438797037414935 0.438723117681462 0 0 hPsi_site_14962 iPseU_CNN:0;iRNA_PseU:0 14963 chr8 86121488 86121488 1 + G A LUSC 86121487 + 86121467 86121507 41 TCTAAGCCCGTGGTTTTTCCTGTTCCCCCACCTGATGACCT TCTAAGCCCGTGGTTTTTCCTATTCCCCCACCTGATGACCT < 41bp 0.455874454568472 0.854544855773867 0.19414246 0.32372832 prediction 0.709089711547733 Functional Gain - E2F5 ENSG00000133740 CDS Human protein_coding chr8:86121487 chr8:86121488 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21239 0 0 1 0 0 Cytosol 0.438567329536773 0.438717194248197 0 0 hPsi_site_14963 iPseU_CNN:0;iRNA_PseU:0 14964 chr12 53647946 53647946 1 + G A BLCA 53647945 + 53647925 53647965 41 CTGCGGGTACCTTCACCTACTGAGGAGCCCTATGCCCCTGA CTGCGGGTACCTTCACCTACTAAGGAGCCCTATGCCCCTGA < 41bp 0.483107769592971 0.854543908556948 0.21257046 0.31736517 prediction 0.709087817113895 Functional Gain - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647945 chr12:53647946 nonsynonymous SNV 0.958 0 22 hPsi_associated_SNPs_21240 0 0 1 0 0 Endoplasmic reticulum 0.438721787258687 0.438718592996418 0 0 hPsi_site_14964 iPseU_CNN:0;iRNA_PseU:0 14965 chr18 59217278 59217278 1 + G A UCEC 59217277 + 59217257 59217297 41 GGAGCAGAGTGTCTTTCACCTGCCTATCCTGATAGCAGATA GGAGCAGAGTGTCTTTCACCTACCTATCCTGATAGCAGATA < 41bp 0.460257906087922 0.854539546555234 0.2568397 0.33871746 prediction 0.709079093110467 Functional Gain - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59217277 chr18:59217278 synonymous SNV . 0 22 hPsi_associated_SNPs_21241 0 0 0 0 1 nucleus 0.438717067130829 0.438704608760679 0 0 hPsi_site_14965 iPseU_CNN:0;iRNA_PseU:0 14966 chr12 102091702 102091702 1 + G A BLCA 102091701 + 102091681 102091721 41 GAGGGCGCTGAGCGAGCCGCTGAGCGCGGCGCAGCTGCGGC GAGGGCGCTGAGCGAGCCGCTAAGCGCGGCGCAGCTGCGGC < 41bp 0.497102601208392 0.854539003602375 0.26602733 0.6738261 prediction 0.70907800720475 Functional Gain - CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102091701 chr12:102091702 synonymous SNV . 0 22 hPsi_associated_SNPs_21242 0 0 1 0 0 Ribosome 0.438722095459414 0.438718795599458 0.3476522 0 hPsi_site_14966 iPseU_CNN:0.3476522;iRNA_PseU:0 14967 chr11 58711103 58711103 1 + G A BLCA 58711102 + 58711082 58711122 41 AGGTACCTGCAGGATCCAATTGTGTCCATTGATCTCTCAGA AGGTACCTGCAGGATCCAATTATGTCCATTGATCTCTCAGA < 41bp 0.498378985956004 0.854533135352863 0.4109861 0.3687865 prediction 0.709066270705725 Functional Gain - GLYATL1 ENSG00000166840 CDS Human protein_coding chr11:58711102 chr11:58711103 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21243 0 0 0 0 2 exosome 0.400986380996592 0.433370627005135 0 0 hPsi_site_14967 iPseU_CNN:0;iRNA_PseU:0 14968 chr3 5024798 5024798 1 + G A UCEC 5024797 + 5024777 5024817 41 AGGTCCTGGGAAAAACTGCGTGCCAGTCATCCAGCGGACTT AGGTCCTGGGAAAAACTGCGTACCAGTCATCCAGCGGACTT < 41bp 0.468602392572154 0.854531215593878 0.30267006 0.85681814 prediction 0.709062431187757 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5024797 chr3:5024798 synonymous SNV . 0 22 hPsi_associated_SNPs_21244 0 0 1 0 0 chromatin 0.437865106367272 0.438510412315669 0.71363628 0 hPsi_site_14968 iPseU_CNN:0.71363628;iRNA_PseU:0 14969 chr8 87454932 87454932 1 + G A STAD 87454931 + 87454911 87454951 41 GGGCAAGAACAACTATTGTCTGCAGATAAATCCAGCATCAA GGGCAAGAACAACTATTGTCTACAGATAAATCCAGCATCAA < 41bp 0.470317684627595 0.85452661599435 0.24313435 0.595144 prediction 0.709053231988699 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87454931 chr8:87454932 synonymous SNV . 0 22 hPsi_associated_SNPs_21245 0 0 0 0 2 Cytosol 0.438722285193705 0.438719947163077 0.190288 0 hPsi_site_14969 iPseU_CNN:0.190288;iRNA_PseU:0 14970 chr6 46107741 46107741 1 + G A UCEC 46107740 + 46107720 46107760 41 GCTATGTGGCCTGGTACTGATGTACCCATTCACGATACCAT GCTATGTGGCCTGGTACTGATATACCCATTCACGATACCAT < 41bp 0.472147837457691 0.854519187796995 0.38961193 0.6763133 prediction 0.709038375593989 Functional Gain - ENPP4 ENSG00000001561 CDS Human protein_coding chr6:46107740 chr6:46107741 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_21246 0 0 1 0 0 exosome 0.438718548975153 0.438718403802058 0.3526266 0 hPsi_site_14970 iPseU_CNN:0.3526266;iRNA_PseU:0 14971 chr8 110099909 110099909 1 + G A SKCM 110099908 + 110099888 110099928 41 TGTCATGAGAACCAAGCACATGAGGACCCCCACAAACTGCT TGTCATGAGAACCAAGCACATAAGGACCCCCACAAACTGCT < 41bp 0.473157620039254 0.854517486640581 0.27359074 0.31020927 prediction 0.709034973281163 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110099908 chr8:110099909 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21247 0 0 0 0 0 exosome 0.438714388136784 0.438758932167323 0 0 hPsi_site_14971 iPseU_CNN:0;iRNA_PseU:0 14972 chr1 44133482 44133482 1 + G A UCEC 44133481 + 44133461 44133501 41 ATGGTGAAGATCTCCATGGATGTGTTTGTGAGAAAGTTCCA ATGGTGAAGATCTCCATGGATATGTTTGTGAGAAAGTTCCA < 41bp 0.522637509458768 0.877154918859612 0.35416356 0.68848956 prediction 0.709034818801688 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44133481 chr1:44133482 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21248 0 0 1 0 1 Nucleus 0.438385359436039 0.437199792646716 0.37697912 0 hPsi_site_14972 iPseU_CNN:0.37697912;iRNA_PseU:0 14973 chr1 220311314 220311314 1 + G A UCEC 220311313 + 220311293 220311333 41 GTCCTTCGCTGGTGGGTAGCTGATTCCAATGTCTTCACCGA GTCCTTCGCTGGTGGGTAGCTAATTCCAATGTCTTCACCGA < 41bp 0.466486417341963 0.854494023412721 0.19188076 0.34237412 prediction 0.708988046825441 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220311313 chr1:220311314 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_21249 0 0 1 0 2 Ribosome 0.438718593016546 0.438718592995102 0 0 hPsi_site_14973 iPseU_CNN:0;iRNA_PseU:0 14974 chr19 50958833 50958833 1 + G A READ 50958832 + 50958812 50958852 41 ACACCACCACCACACTCAAGTGGAGGCCTCCGAACAGGATC ACACCACCACCACACTCAAGTAGAGGCCTCCGAACAGGATC < 41bp 0.451813906794067 0.854487496377094 0.24978688 0.28443468 prediction 0.708974992754188 Functional Gain - MYBPC2 ENSG00000086967 CDS Human protein_coding chr19:50958832 chr19:50958833 stopgain 0.986 0 22 hPsi_associated_SNPs_21250 0 0 0 0 2 exosome 0.438714239478036 0.438596946132754 0 0 hPsi_site_14974 iPseU_CNN:0;iRNA_PseU:0 14975 chr5 161119002 161119002 1 + G A TGCT 161119001 + 161118981 161119021 41 CATCAGTGCCCGGCACTCTTTGCCAAAAGTGTCATATGCCA CATCAGTGCCCGGCACTCTTTACCAAAAGTGTCATATGCCA < 41bp 0.526136207075394 0.880616924773846 0.15432522 0.26371515 prediction 0.708961435396905 Functional Gain - GABRA6 ENSG00000145863 CDS Human protein_coding chr5:161119001 chr5:161119002 synonymous SNV . 0 22 hPsi_associated_SNPs_21251 0 0 0 0 1 unknown 0.438838959789298 0.438473419091875 0 0 hPsi_site_14975 iPseU_CNN:0;iRNA_PseU:0 14976 chrX 78427197 78427197 1 + G A LUAD 78427196 + 78427176 78427216 41 GAAACAGAAAGCCTTGAAGATGATTCTAACCTGTGCAGGGG GAAACAGAAAGCCTTGAAGATAATTCTAACCTGTGCAGGGG < 41bp 0.513213660317073 0.867687077500484 0.24111962 0.33755177 prediction 0.708946834366823 Functional Gain - GPR174 ENSG00000147138 CDS Human protein_coding chrX:78427196 chrX:78427197 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21252 0 0 0 0 0 exosome 0.438718548815803 0.438718611716838 0 0 hPsi_site_14976 iPseU_CNN:0;iRNA_PseU:0 14977 chr5 140228278 140228278 1 + G A HNSC 140228277 + 140228257 140228297 41 GGTGCCGCGCCTGTTCCAGTTGGATTCCAAAGGCCGCGGGG GGTGCCGCGCCTGTTCCAGTTAGATTCCAAAGGCCGCGGGG < 41bp 0.516586503713628 0.87105498986112 0.7578899 0.9042127 prediction 0.708936972294984 Functional Gain - PCDHA9 ENSG00000204961 CDS Human protein_coding chr5:140228277 chr5:140228278 synonymous SNV . 0 22 hPsi_associated_SNPs_21253 0 0 0 0 0 Nucleus 0.438715426130687 0.438718305598498 0.2926456 0 hPsi_site_14977 iPseU_CNN:0.2926456;iRNA_PseU:0 14978 chr11 62434253 62434253 1 + G A HNSC 62434252 + 62434232 62434272 41 TGCTCAGAACCTGGGGGCTGTGGCTTCTTCAGGCTCTTTCC TGCTCAGAACCTGGGGGCTGTAGCTTCTTCAGGCTCTTTCC < 41bp 0.530766275813031 0.885231890208344 0.22161564 0.5445833 prediction 0.708931228790627 Functional Gain - METTL12 ENSG00000214756 CDS Human protein_coding chr11:62434252 chr11:62434253 synonymous SNV . 0 22 hPsi_associated_SNPs_21254 0 0 0 0 0 Cytosol 0.438718592995187 0.438718593553878 0.0891666 0 hPsi_site_14978 iPseU_CNN:0.0891666;iRNA_PseU:0 14979 chr7 142919621 142919621 1 + G A LUAD 142919620 + 142919600 142919640 41 TTGGCTTCTCAGGCTGTCAGTGTTGGTTTCCTTAAGCTTCA TTGGCTTCTCAGGCTGTCAGTATTGGTTTCCTTAAGCTTCA < 41bp 0.511980346329779 0.86644568018123 0.27184826 0.40354618 prediction 0.708930667702902 Functional Gain - TAS2R40 ENSG00000221937 CDS Human protein_coding chr7:142919620 chr7:142919621 synonymous SNV . 0 22 hPsi_associated_SNPs_21255 0 0 0 0 0 unknown 0.440755630959632 0.43869942741781 0 0 hPsi_site_14979 iPseU_CNN:0;iRNA_PseU:0 14980 chr17 3101318 3101318 1 + G A UCEC 3101317 + 3101297 3101337 41 TCACAGCTAGTTTGTCCTTCTGTGGCAACCAGGAAGTAGCC TCACAGCTAGTTTGTCCTTCTATGGCAACCAGGAAGTAGCC < 41bp 0.490834599849661 0.854462075167632 0.32705835 0.384022 prediction 0.708924150335264 Functional Gain - OR1A2 ENSG00000172150 CDS Human protein_coding chr17:3101317 chr17:3101318 nonsynonymous SNV 0.526 4 22 hPsi_associated_SNPs_21256 0 0 0 0 0 exosome 0.438722195936411 0.438718593825718 0 0 hPsi_site_14980 iPseU_CNN:0;iRNA_PseU:0 14981 chr12 49717795 49717795 1 + G A BLCA 49717794 + 49717774 49717814 41 TAGCCCTAGGGGTCAAAATGTGGGGCCTGGGCCCCCTGCCC TAGCCCTAGGGGTCAAAATGTAGGGCCTGGGCCCCCTGCCC < 41bp 0.458338564804881 0.854455952262771 0.32286304 0.63731116 prediction 0.708911904525541 Functional Gain - TROAP ENSG00000135451 CDS Human protein_coding chr12:49717794 chr12:49717795 synonymous SNV . 0 22 hPsi_associated_SNPs_21257 0 0 1 0 1 Ribosome 0.438718593959682 0.438718592995102 0.27462232 0 hPsi_site_14981 iPseU_CNN:0.27462232;iRNA_PseU:0 14982 chr6 57037562 57037562 1 + G A BLCA 57037561 + 57037541 57037581 41 TGCCGCTCCTCCTCCATGGCTGACCGCTCCAGCCGCCTGCT TGCCGCTCCTCCTCCATGGCTAACCGCTCCAGCCGCCTGCT < 41bp 0.516435409802997 0.870885381902239 0.30301142 0.54936975 prediction 0.708899944198484 Functional Gain - BAG2 ENSG00000112208 CDS Human protein_coding chr6:57037561 chr6:57037562 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_21258 0 0 1 0 1 Ribosome 0.438817769918847 0.438718585676943 0.0987395 0 hPsi_site_14982 iPseU_CNN:0.0987395;iRNA_PseU:0 14983 chr19 13939509 13939509 1 + G A UCEC 13939508 + 13939488 13939528 41 CTGGCGGCGGAGGGAGATGGTGCGCTGGCTGGTCAGCTGTG CTGGCGGCGGAGGGAGATGGTACGCTGGCTGGTCAGCTGTG < 41bp 0.45352975212884 0.854448637549732 0.3240791 0.65746474 prediction 0.708897275099463 Functional Gain - ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13939508 chr19:13939509 synonymous SNV . 0 22 hPsi_associated_SNPs_21259 0 0 0 0 2 chromatin 0.438718585711175 0.438717234266854 0.31492948 0 hPsi_site_14983 iPseU_CNN:0.31492948;iRNA_PseU:0 14984 chr17 48145557 48145557 1 + G A UCEC 48145556 + 48145536 48145576 41 GCAGACCTACCACAACGAGATGTGCAATAGCAACACAGACT GCAGACCTACCACAACGAGATATGCAATAGCAACACAGACT < 41bp 0.458166614386005 0.854445213595136 0.33657676 0.67950547 prediction 0.708890427190271 Functional Gain - ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48145556 chr17:48145557 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21260 0 0 0 0 0 Cytosol 0.43841971766074 0.438315449890957 0.35901094 0 hPsi_site_14984 iPseU_CNN:0.35901094;iRNA_PseU:0 14985 chr15 82574864 82574864 1 + G A CESC 82574863 + 82574843 82574883 41 GAAGGAAGCACTGAATTCCGTGAAAGTTTTCAACCATGGGA GAAGGAAGCACTGAATTCCGTAAAAGTTTTCAACCATGGGA < 41bp 0.48460029944244 0.85442961693262 0.28221375 0.35215044 prediction 0.708859233865241 Functional Gain - SAXO2 ENSG00000188659 CDS Human protein_coding chr15:82574863 chr15:82574864 nonsynonymous SNV 0.763 1 22 hPsi_associated_SNPs_21261 0 0 0 0 0 nucleus 0.438718592995113 0.438718592984717 0 0 hPsi_site_14985 iPseU_CNN:0;iRNA_PseU:0 14986 chr12 93881329 93881329 1 + G A LUSC 93881328 + 93881308 93881348 41 AGAAACACATGATCAAGTGCTGAAAACCAGATTGGAAGAAA AGAAACACATGATCAAGTGCTAAAAACCAGATTGGAAGAAA < 41bp 0.511186262024496 0.865613913670947 0.33509567 0.6275168 prediction 0.708855303292901 Functional Gain - MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93881328 chr12:93881329 synonymous SNV . 0 22 hPsi_associated_SNPs_21262 0 0 1 0 1 Cytosol 0.438647619130114 0.438718617589674 0.2550336 0 hPsi_site_14986 iPseU_CNN:0.2550336;iRNA_PseU:0 14987 chr9 35736523 35736523 1 + G A CESC 35736522 + 35736502 35736542 41 GACTGTGTACTCCAGGCCCCTGGCAACACTTCCTGCCTGCT GACTGTGTACTCCAGGCCCCTAGCAACACTTCCTGCCTGCT < 41bp 0.472234129027841 0.8544269256205 0.22268733 0.2909915 prediction 0.708853851241 Functional Gain - CREB3 ENSG00000107175 CDS Human protein_coding chr9:35736522 chr9:35736523 nonsynonymous SNV 0.050 0 22 hPsi_associated_SNPs_21263 0 0 0 0 0 Endoplasmic reticulum 0.438717945594653 0.438761503620873 0 0 hPsi_site_14987 iPseU_CNN:0;iRNA_PseU:0 14988 chr22 37319366 37319366 1 + G A SKCM 37319365 + 37319345 37319385 41 AGGTGGGCAGACACCCAGGATGCCCAGCGGCTCGTCAACGT AGGTGGGCAGACACCCAGGATACCCAGCGGCTCGTCAACGT < 41bp 0.453510333637407 0.85442282170819 0.1551562 0.31644246 prediction 0.70884564341638 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37319365 chr22:37319366 nonsynonymous SNV 0.031 3 22 hPsi_associated_SNPs_21264 0 0 0 0 2 Endoplasmic reticulum 0.438719977367816 0.438803311498779 0 0 hPsi_site_14988 iPseU_CNN:0;iRNA_PseU:0 14989 chr3 40503613 40503613 1 + G A PAAD 40503612 + 40503592 40503632 41 GCTCCAGCCCAGAAGGTTCCTGCCCAGAAAGCCACAGGCCA GCTCCAGCCCAGAAGGTTCCTACCCAGAAAGCCACAGGCCA < 41bp 0.520965350914756 0.875380645020892 0.25561443 0.671432 prediction 0.708830588212271 Functional Gain - RPL14 ENSG00000188846 CDS Human protein_coding chr3:40503612 chr3:40503613 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_21265 0 0 1 0 0 Ribosome 0.438718654696941 0.438718700371544 0.342864 0 hPsi_site_14989 iPseU_CNN:0.342864;iRNA_PseU:0 14990 chr1 161088976 161088976 1 + G A BRCA 161088975 + 161088955 161088995 41 TGCGAACTGCCCCTGGTGGCTGTGTGCCAGGTAACATCGAC TGCGAACTGCCCCTGGTGGCTATGTGCCAGGTAACATCGAC < 41bp 0.533292998944469 0.887704945845901 0.18239501 0.278144 prediction 0.708823893802864 Functional Gain - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161088975 chr1:161088976 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21266 0 0 1 0 1 nucleolus 0.438715800267356 0.438718529897012 0 0 hPsi_site_14990 iPseU_CNN:0;iRNA_PseU:0 14991 chr20 4705354 4705354 1 + G A BLCA 4705353 + 4705333 4705373 41 ATCACTGAGGCCCAGGTGGCTGAGAACCGCCCGGGAGCCTT ATCACTGAGGCCCAGGTGGCTAAGAACCGCCCGGGAGCCTT < 41bp 0.52469865171566 0.879110152502807 0.22841442 0.31283754 prediction 0.708823001574294 Functional Gain - PRND ENSG00000171864 CDS Human protein_coding chr20:4705353 chr20:4705354 nonsynonymous SNV 0.458 2 22 hPsi_associated_SNPs_21267 0 0 0 0 0 Nucleus 0.438716323931667 0.438718592969286 0 0 hPsi_site_14991 iPseU_CNN:0;iRNA_PseU:0 14992 chr19 47535606 47535606 1 + G A PAAD 47535605 + 47535585 47535625 41 GCACCTGGGAGGTCACATCTTGCAGGTGAGTGAGGCCCCTT GCACCTGGGAGGTCACATCTTACAGGTGAGTGAGGCCCCTT < 41bp 0.464699308472185 0.854407995843526 0.2532922 0.43925542 prediction 0.708815991687053 Functional Gain - NPAS1 ENSG00000130751 CDS Human protein_coding chr19:47535605 chr19:47535606 synonymous SNV . 0 22 hPsi_associated_SNPs_21268 0 0 0 0 2 chromatin 0.438718592966404 0.438718595855166 0 0 hPsi_site_14992 iPseU_CNN:0;iRNA_PseU:0 14993 chr11 126215507 126215507 1 + G A rs139354381 126215506 + 126215486 126215526 41 TGCAGGAGGCTCAGCAAAGCTGAATTAACTCAGGCAGAAGA TGCAGGAGGCTCAGCAAAGCTAAATTAACTCAGGCAGAAGA < 41bp 0.507874978088833 0.862273496776448 0.23046893 0.3125255 prediction 0.708797037375231 Functional Gain - DCPS ENSG00000110063 CDS Human protein_coding chr11:126215506 chr11:126215507 synonymous SNV . 0 22 hPsi_associated_SNPs_21269 0 0 1 0 0 Ribosome 0.438709075795916 0.43933956514911 0 0 hPsi_site_14993 iPseU_CNN:0;iRNA_PseU:0 14994 chr9 136319642 136319642 1 + G A rs36222579 136319641 + 136319621 136319661 41 CCAAGGCCAGGACGTGGAGGTGGACGAGGCGGCCTGTGCGG CCAAGGCCAGGACGTGGAGGTAGACGAGGCGGCCTGTGCGG < 41bp 0.484059907509717 0.854374660893093 0.34950432 0.8731041 prediction 0.708749321786186 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136319641 chr9:136319642 synonymous SNV . 0 22 hPsi_associated_SNPs_21270 0 0 0 0 1 nucleus 0.438718589566272 0.438718594225174 0.7462082 0 hPsi_site_14994 iPseU_CNN:0.7462082;iRNA_PseU:0 14995 chr1 46977767 46977767 1 + G A rs115917561 46977766 + 46977746 46977786 41 GGCCCCAGGGGGTGGCCTCCTGGGCCCCTCCCACTCCTATT GGCCCCAGGGGGTGGCCTCCTAGGCCCCTCCCACTCCTATT < 41bp 0.523667152364434 0.878041341043438 0.21214536 0.3186576 prediction 0.708748377358008 Functional Gain - DMBX1 ENSG00000197587 CDS Human protein_coding chr1:46977766 chr1:46977767 synonymous SNV . 0 22 hPsi_associated_SNPs_21271 0 0 0 0 1 nucleolus 0.438718592995085 0.438718592995102 0 0 hPsi_site_14995 iPseU_CNN:0;iRNA_PseU:0 14996 chr1 8025459 8025459 1 + G A rs114601558 8025458 + 8025438 8025478 41 GATGTGGTCATTTGTCCTGATGCCAGCCTTGAAGATGCAAA GATGTGGTCATTTGTCCTGATACCAGCCTTGAAGATGCAAA < 41bp 0.466403630764083 0.854363770731601 0.19294286 0.23859894 prediction 0.708727541463203 Functional Gain - PARK7 ENSG00000116288 CDS Human protein_coding chr1:8025458 chr1:8025459 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21272 0 0 1 0 2 Ribosome 0.438758059569694 0.438544240792186 0 0 hPsi_site_14996 iPseU_CNN:0;iRNA_PseU:0 14997 chr3 49548117 49548117 1 + G A READ 49548116 + 49548096 49548136 41 AAACCAGCTTGAGGCATCCATGCACTCAGTGCTCTCAGACC AAACCAGCTTGAGGCATCCATACACTCAGTGCTCTCAGACC < 41bp 0.517024349119728 0.871383614158482 0.68824595 0.93905747 prediction 0.708718530077509 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49548116 chr3:49548117 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21273 0 0 1 0 0 Nucleus 0.438430485358672 0.43890755461182 0.50162304 0 hPsi_site_14997 iPseU_CNN:0.50162304;iRNA_PseU:0 14998 chr1 45806848 45806848 1 + G A UCEC 45806847 + 45806827 45806867 41 GGAGATGTGGCCATCCCTCCTGCTAGCCATAAAGACAGCTA GGAGATGTGGCCATCCCTCCTACTAGCCATAAAGACAGCTA < 41bp 0.473567619426012 0.854344275544287 0.26015532 0.5152774 prediction 0.708688551088575 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45806847 chr1:45806848 synonymous SNV . 0 22 hPsi_associated_SNPs_21274 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995099 0.0305548 0 hPsi_site_14998 iPseU_CNN:0.0305548;iRNA_PseU:0 14999 chr2 10186296 10186296 1 + G A OV 10186295 + 10186275 10186315 41 AGGTTGACATCATGGACATATGTGAGTCCATCCTGGAGAGG AGGTTGACATCATGGACATATATGAGTCCATCCTGGAGAGG < 41bp 0.525472443627595 0.879814946915775 0.33408684 0.37623197 prediction 0.70868500657636 Functional Gain - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10186295 chr2:10186296 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_21275 0 0 1 0 1 nucleoplasm 0.445010171594102 0.440162764277698 0 0 hPsi_site_14999 iPseU_CNN:0;iRNA_PseU:0 15000 chr16 27221639 27221639 1 + G A COAD 27221638 + 27221618 27221658 41 GGGCAGGAGGGACGAGTGTCTGCAGAGCAGCGAGGTGATCC GGGCAGGAGGGACGAGTGTCTACAGAGCAGCGAGGTGATCC < 41bp 0.451112971853664 0.854341847670468 0.41311002 0.6807525 prediction 0.708683695340936 Functional Gain - KDM8 ENSG00000155666 CDS Human protein_coding chr16:27221638 chr16:27221639 synonymous SNV . 0 22 hPsi_associated_SNPs_21276 0 0 1 0 0 nucleolus 0.438718614458721 0.438718592771729 0.361505 0 hPsi_site_15000 iPseU_CNN:0.361505;iRNA_PseU:0 15001 chr17 59479190 59479190 1 + G A BLCA 59479189 + 59479169 59479209 41 GTGGCGGGCAAGGCCGACCCTGAGATGCCCAAACGCATGTA GTGGCGGGCAAGGCCGACCCTAAGATGCCCAAACGCATGTA < 41bp 0.450421249398645 0.854340297514763 0.17047903 0.20434067 prediction 0.708680595029527 Functional Gain - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59479189 chr17:59479190 nonsynonymous SNV 0.980 3 22 hPsi_associated_SNPs_21277 0 0 0 0 0 Cytosol 0.438426406347516 0.43860736113538 0 0 hPsi_site_15001 iPseU_CNN:0;iRNA_PseU:0 15002 chr6 33373046 33373046 1 + G A ACC 33373045 + 33373025 33373065 41 GATGAAGTGTTTGAAGAGATTGCCATGCTTGTCCAGTCAGC GATGAAGTGTTTGAAGAGATTACCATGCTTGTCCAGTCAGC < 41bp 0.462561405489259 0.854340252960564 0.33829147 0.79549575 prediction 0.708680505921128 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33373045 chr6:33373046 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_21278 0 0 1 0 0 Cytosol 0.438710501206841 0.43849753038434 0.5909915 0 hPsi_site_15002 iPseU_CNN:0.5909915;iRNA_PseU:0 15003 chr7 105615406 105615406 1 + G A rs35008315 105615405 + 105615385 105615425 41 TTATCAGCATCATTGTCACCTGTGATCCCAGGATTTCCCCA TTATCAGCATCATTGTCACCTATGATCCCAGGATTTCCCCA < 41bp 0.470035803865977 0.854338736695647 0.22470292 0.25763053 prediction 0.708677473391295 Functional Gain - CDHR3 ENSG00000128536 CDS Human protein_coding chr7:105615405 chr7:105615406 nonsynonymous SNV 0.859 3 22 hPsi_associated_SNPs_21279 0 0 0 4 2 cytosol 0.440985566455675 0.440258270902935 0 0 hPsi_site_15003 iPseU_CNN:0;iRNA_PseU:0 15004 chr12 133294636 133294636 1 + G A UCEC 133294635 + 133294615 133294655 41 AACTACATCCACCGCGCAGATGCCAGGCAGGAGGAGGACAG AACTACATCCACCGCGCAGATACCAGGCAGGAGGAGGACAG < 41bp 0.468058878932938 0.854319126690373 0.13780445 0.21948159 prediction 0.708638253380746 Functional Gain - PGAM5 ENSG00000247077 CDS Human protein_coding chr12:133294635 chr12:133294636 nonsynonymous SNV 0.155 0 22 hPsi_associated_SNPs_21280 0 0 1 0 3 Cytosol 0.438738514788744 0.437099575169387 0 0 hPsi_site_15004 iPseU_CNN:0;iRNA_PseU:0 15005 chr1 6635194 6635194 1 + G A THCA 6635193 + 6635173 6635213 41 GAAGAGGGCTGTCCCTGGCCTGAAGGCGTTTGAAGAAGCCT GAAGAGGGCTGTCCCTGGCCTAAAGGCGTTTGAAGAAGCCT < 41bp 0.464892485606402 0.854314469304557 0.3085286 0.55418205 prediction 0.708628938609114 Functional Gain - TAS1R1 ENSG00000173662 CDS Human protein_coding chr1:6635193 chr1:6635194 synonymous SNV . 0 22 hPsi_associated_SNPs_21281 0 0 0 0 0 membrane 0.438718593144724 0.438718914425718 0.1083641 0 hPsi_site_15005 iPseU_CNN:0.1083641;iRNA_PseU:0 15006 chr17 45913816 45913816 1 + G A BLCA 45913815 + 45913795 45913835 41 CGATGAGGAGTTCCCAGAGCTGAGTGGCCCATTCTGCTCAG CGATGAGGAGTTCCCAGAGCTAAGTGGCCCATTCTGCTCAG < 41bp 0.530293005264619 0.884603445029732 0.2664324 0.6242271 prediction 0.708620879530226 Functional Gain - LRRC46 ENSG00000141294 CDS Human protein_coding chr17:45913815 chr17:45913816 synonymous SNV . 0 22 hPsi_associated_SNPs_21282 0 0 0 0 1 exosome 0.438573432445292 0.438718484726398 0.2484542 0 hPsi_site_15006 iPseU_CNN:0.2484542;iRNA_PseU:0 15007 chr21 45821610 45821610 1 + G A UCEC 45821609 + 45821589 45821629 41 ACCCCCGCGGCCCGCGCCCGTGCCTTCTTCACCGCACCCGT ACCCCCGCGGCCCGCGCCCGTACCTTCTTCACCGCACCCGT < 41bp 0.452682609229523 0.854300559977008 0.27036375 0.668223 prediction 0.708601119954017 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45821609 chr21:45821610 nonsynonymous SNV 0.691 0 22 hPsi_associated_SNPs_21283 0 0 0 0 1 Ribosome 0.438718592913511 0.438718593009797 0.336446 0 hPsi_site_15007 iPseU_CNN:0.336446;iRNA_PseU:0 15008 chr14 20296087 20296087 1 + G A SKCM 20296086 + 20296066 20296106 41 TGTCCACTCCATTATCCAGGTGGTCCTCATCCTCCGCTTGC TGTCCACTCCATTATCCAGGTAGTCCTCATCCTCCGCTTGC < 41bp 0.482927653765568 0.854299468537575 0.14282367 0.68932396 prediction 0.708598937075149 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20296086 chr14:20296087 synonymous SNV . 0 22 hPsi_associated_SNPs_21284 0 0 0 0 0 unknown 0.438718728645149 0.438237334033462 0.37864792 0 hPsi_site_15008 iPseU_CNN:0.37864792;iRNA_PseU:0 15009 chr11 64081441 64081441 1 + G A STAD 64081440 + 64081420 64081460 41 CAGGGAGCATCGAGTACAGCTGTCCGGCCTCCAACGAGTGT CAGGGAGCATCGAGTACAGCTATCCGGCCTCCAACGAGTGT < 41bp 0.526471293537772 0.880766675417298 0.27453724 0.6189529 prediction 0.708590763759051 Functional Gain - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64081440 chr11:64081441 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21285 0 0 1 0 1 Cytosol 0.438718924279396 0.438718611832119 0.2379058 0 hPsi_site_15009 iPseU_CNN:0.2379058;iRNA_PseU:0 15010 chr10 6262752 6262752 1 + G A UCEC 6262751 + 6262731 6262771 41 AGCCGCGTACCATCTACCTGTGCCGGCACGGCGAGAACGAG AGCCGCGTACCATCTACCTGTACCGGCACGGCGAGAACGAG < 41bp 0.449423752319835 0.854294980058274 0.17294759 0.46763608 prediction 0.708589960116548 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6262751 chr10:6262752 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21286 0 0 1 0 1 Ribosome 0.438718575029954 0.438718890638531 0 0 hPsi_site_15010 iPseU_CNN:0;iRNA_PseU:0 15011 chrX 106848264 106848264 1 + G A rs144882078 106848263 + 106848243 106848283 41 GCCACTGCAAGCTGGAGTGCTGATATGGTCTTCTTTTTCTC GCCACTGCAAGCTGGAGTGCTAATATGGTCTTCTTTTTCTC < 41bp 0.499622784170228 0.854285879384691 0.22429863 0.29184997 prediction 0.708571758769381 Functional Gain - FRMPD3 ENSG00000147234 UTR3 Human protein_coding chrX:106848263 chrX:106848264 . . 0 22 hPsi_associated_SNPs_21287 0 0 0 0 0 exosome 0.442129931228798 0.435601126050417 0 0 hPsi_site_15011 iPseU_CNN:0;iRNA_PseU:0 15012 chr2 237490003 237490003 1 + G A STAD 237490002 + 237489982 237490022 41 GCCCTCTTCACGGCCCTGCATGTCACACAGTGCCTGTCGCT GCCCTCTTCACGGCCCTGCATATCACACAGTGCCTGTCGCT < 41bp 0.468554727929121 0.85428556191013 0.4568131 0.66760856 prediction 0.708571123820261 Functional Gain - ACKR3 ENSG00000144476 CDS Human protein_coding chr2:237490002 chr2:237490003 nonsynonymous SNV 0.483 0 22 hPsi_associated_SNPs_21288 0 0 0 0 0 Nucleus 0.433907284162353 0.43006809883856 0.33521712 0 hPsi_site_15012 iPseU_CNN:0.33521712;iRNA_PseU:0 15013 chr8 24774808 24774808 1 + G A COAD 24774807 + 24774787 24774827 41 GACAGCCATTACAGAGGAATTGGCCGTTTCCATGAAGGAAG GACAGCCATTACAGAGGAATTAGCCGTTTCCATGAAGGAAG < 41bp 0.470170998884396 0.854279405377038 0.21058348 0.27167067 prediction 0.708558810754076 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24774807 chr8:24774808 synonymous SNV . 0 22 hPsi_associated_SNPs_21289 0 0 0 0 0 exosome 0.438669605453725 0.438713744794969 0 0 hPsi_site_15013 iPseU_CNN:0;iRNA_PseU:0 15014 chr3 52327144 52327144 1 + G A SKCM 52327143 + 52327123 52327163 41 TGTTCCTGCGGCCTCGGTGATGGCATAGGTCACATTTTGGG TGTTCCTGCGGCCTCGGTGATAGCATAGGTCACATTTTGGG < 41bp 0.465519450530172 0.854266180485084 0.26205832 0.32747746 prediction 0.708532360970168 Functional Gain - GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52327143 chr3:52327144 nonsynonymous SNV 0.083 1 22 hPsi_associated_SNPs_21290 0 0 1 4 2 chromatin 0.43871859322891 0.438718583306742 0 0 hPsi_site_15014 iPseU_CNN:0;iRNA_PseU:0 15015 chr1 19983482 19983482 1 + G A rs201653889 19983481 + 19983461 19983501 41 CACGAGGGGCTGAGCGTCTATGTGCAGGGCGAGGACGGGCC CACGAGGGGCTGAGCGTCTATATGCAGGGCGAGGACGGGCC < 41bp 0.526422072351078 0.880685714723127 0.39551413 0.5932786 prediction 0.708527284744097 Functional Gain - MINOS1-NBL1;NBL1 ENSG00000158747;ENSG00000270136 CDS Human other chr1:19983481 chr1:19983482 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_21291 0 0 1 0 0 unknown 0.438723589537186 0.43871909238299 0.1865572 0 hPsi_site_15015 iPseU_CNN:0.1865572;iRNA_PseU:0 15016 chr1 3679939 3679939 1 + G A HNSC 3679938 + 3679918 3679958 41 TCCTCCCTGGCCGAGTCGTTTGAGGAGGAGCTGCTGGCCCA TCCTCCCTGGCCGAGTCGTTTAAGGAGGAGCTGCTGGCCCA < 41bp 0.468812007605443 0.854259890422779 0.5758609 0.7766113 prediction 0.708519780845558 Functional Gain - CCDC27 ENSG00000162592 CDS Human protein_coding chr1:3679938 chr1:3679939 nonsynonymous SNV 0.469 3 22 hPsi_associated_SNPs_21292 0 0 0 0 1 exosome 0.438718593011111 0.438718593004944 0.4015008 0 hPsi_site_15016 iPseU_CNN:0.4015008;iRNA_PseU:0 15017 chr22 21045140 21045140 1 + G A rs374822423 21045139 + 21045119 21045159 41 TGCAACAGGGGCTTCTGGTCTGCCTGCCGTTTCTAAAGCAC TGCAACAGGGGCTTCTGGTCTACCTGCCGTTTCTAAAGCAC < 41bp 0.488172836269724 0.854258569651045 0.26537108 0.30490333 prediction 0.708517139302089 Functional Gain - POM121L4P ENSG00000217261 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:21045139 chr22:21045140 . . 0 22 hPsi_associated_SNPs_21293 0 0 0 0 0 unknown 0.438818540185109 0.440358805297689 0 0 hPsi_site_15017 iPseU_CNN:0;iRNA_PseU:0 15018 chr19 57911091 57911091 1 + G A LUSC 57911090 + 57911070 57911110 41 GTGGAGAAAGACCTTATGAGTGCAGCGAATGCCAGAAGGCC GTGGAGAAAGACCTTATGAGTACAGCGAATGCCAGAAGGCC < 41bp 0.486685575398389 0.854257823730109 0.22144797 0.4252244 prediction 0.708515647460218 Functional Gain - ZNF548 ENSG00000188785 CDS Human protein_coding chr19:57911090 chr19:57911091 nonsynonymous SNV 0.968 4 22 hPsi_associated_SNPs_21294 0 0 1 0 0 Nucleus 0.438718593296895 0.438718475992083 0 0 hPsi_site_15018 iPseU_CNN:0;iRNA_PseU:0 15019 chr19 39689855 39689855 1 + G A COAD 39689854 + 39689834 39689874 41 GGACCTTCTGGCCGAGGGCCTGTGGGAGGAGCTGCTGGATG GGACCTTCTGGCCGAGGGCCTATGGGAGGAGCTGCTGGATG < 41bp 0.454922763784013 0.85424904546554 0.34809285 0.42013377 prediction 0.708498090931081 Functional Gain - NCCRP1 ENSG00000188505 CDS Human protein_coding chr19:39689854 chr19:39689855 synonymous SNV . 0 22 hPsi_associated_SNPs_21295 0 0 0 0 2 exosome 0.438718591759171 0.438718577756841 0 0 hPsi_site_15019 iPseU_CNN:0;iRNA_PseU:0 15020 chr4 139966097 139966097 1 + G A CESC 139966096 + 139966076 139966116 41 CAACAGTGCCAATATTAGGCTGACAGCCATGACATTGAAAA CAACAGTGCCAATATTAGGCTAACAGCCATGACATTGAAAA < 41bp 0.516904985574793 0.871148503002847 0.24182737 0.34403956 prediction 0.708487034856107 Functional Gain - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966096 chr4:139966097 synonymous SNV . 0 22 hPsi_associated_SNPs_21296 0 0 1 0 0 chromatin 0.437570048381825 0.438128294990577 0 0 hPsi_site_15020 iPseU_CNN:0;iRNA_PseU:0 15021 chr11 75480155 75480155 1 + G A LUSC 75480154 + 75480134 75480174 41 CGCGCGAGGGGTCTGGGAGATGGGGTGAGTGCCACGGCGCA CGCGCGAGGGGTCTGGGAGATAGGGTGAGTGCCACGGCGCA < 41bp 0.479060078753272 0.854232163788517 0.2524764 0.4533142 prediction 0.708464327577034 Functional Gain - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75480154 chr11:75480155 stopgain 0.999 0 22 hPsi_associated_SNPs_21297 0 0 1 0 1 Ribosome 0.438717186659222 0.437804916996537 0 0 hPsi_site_15021 iPseU_CNN:0;iRNA_PseU:0 15022 chr10 50819730 50819730 1 + G A SKCM 50819729 + 50819709 50819749 41 TCGAACCCACCATTGCCACGTGGATGAAGCATACGATGGCG TCGAACCCACCATTGCCACGTAGATGAAGCATACGATGGCG < 41bp 0.514240758888403 0.86847245474114 0.1452029 0.5619378 prediction 0.708463391705473 Functional Gain - SLC18A3 ENSG00000187714 CDS Human protein_coding chr10:50819729 chr10:50819730 stopgain 1.000 0 22 hPsi_associated_SNPs_21298 0 0 0 0 0 exosome 0.438718578985227 0.438717690621863 0.1238756 0 hPsi_site_15022 iPseU_CNN:0.1238756;iRNA_PseU:0 15023 chr8 145166868 145166868 1 + G A rs551878508 145166867 + 145166847 145166887 41 AGAGAGACCCGGGATGTGTGTGCTGTACCCCAAGCTGCCCA AGAGAGACCCGGGATGTGTGTACTGTACCCCAAGCTGCCCA < 41bp 0.4681516585862 0.854231667357165 0.2813779 0.79151416 prediction 0.708463334714329 Functional Gain - WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166867 chr8:145166868 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21299 0 0 0 0 1 chromatin 0.438718595148301 0.438718592789781 0.58302832 0 hPsi_site_15023 iPseU_CNN:0.58302832;iRNA_PseU:0 15024 chr1 11249909 11249909 1 + G A SKCM 11249908 + 11249888 11249928 41 GGAGAGCAACAGCAAGCGCATGGAGTCGCGGCTCACAGATG GGAGAGCAACAGCAAGCGCATAGAGTCGCGGCTCACAGATG < 41bp 0.523846827094885 0.87807585178979 0.28797737 0.36251518 prediction 0.708458049389809 Functional Gain - ANGPTL7 ENSG00000171819 CDS Human protein_coding chr1:11249908 chr1:11249909 nonsynonymous SNV 0.852 0 22 hPsi_associated_SNPs_21300 0 0 0 0 0 nucleoplasm 0.438718572412467 0.438759314656165 0 0 hPsi_site_15024 iPseU_CNN:0;iRNA_PseU:0 15025 chr19 11024561 11024561 1 + G A rs114556688 11024560 + 11024540 11024580 41 TGCCCGCCTGCAGGTCTTGGTGAAGAGTAACAACCTGACGG TGCCCGCCTGCAGGTCTTGGTAAAGAGTAACAACCTGACGG < 41bp 0.465332962038963 0.854226771989656 0.29087445 0.4417876 prediction 0.708453543979312 Functional Gain - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11024560 chr19:11024561 synonymous SNV . 0 22 hPsi_associated_SNPs_21301 0 0 1 0 1 Ribosome 0.438669201417241 0.438718591175898 0 0 hPsi_site_15025 iPseU_CNN:0;iRNA_PseU:0 15026 chr5 76028567 76028567 1 + G A CESC 76028566 + 76028546 76028586 41 AGTGATTGGCAGTTTGGGTCTGAATTGTGTCGCTTCGTCAC AGTGATTGGCAGTTTGGGTCTAAATTGTGTCGCTTCGTCAC < 41bp 0.509774121288198 0.863990959234867 0.13793758 0.2169568 prediction 0.708433675893337 Functional Gain - F2R ENSG00000181104 CDS Human protein_coding chr5:76028566 chr5:76028567 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_21302 0 0 1 0 0 Endoplasmic reticulum 0.43787655402099 0.438618602057843 0 0 hPsi_site_15026 iPseU_CNN:0;iRNA_PseU:0 15027 chr1 3395039 3395039 1 + G A rs10797395 3395038 + 3395018 3395058 41 CCAGATGAACCACATCCAGGTGGAGAAGATAGAGCCGTCTG CCAGATGAACCACATCCAGGTAGAGAAGATAGAGCCGTCTG < 41bp 0.457926483209642 0.854216588341002 0.32318586 0.8154573 prediction 0.708433176682005 Functional Gain - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3395038 chr1:3395039 synonymous SNV . 0 22 hPsi_associated_SNPs_21303 0 0 0 0 1 Ribosome 0.446464783386719 0.438080261841986 0.6309146 0 hPsi_site_15027 iPseU_CNN:0.6309146;iRNA_PseU:0 15028 chr1 247769173 247769173 1 + G A SKCM 247769172 + 247769152 247769192 41 AAGAAGACGATCACTTACGGTGGTTGTGTGGCGCAACTCTA AAGAAGACGATCACTTACGGTAGTTGTGTGGCGCAACTCTA < 41bp 0.492800112547971 0.854201092571488 0.30579323 0.68502957 prediction 0.708402185142977 Functional Gain - OR2G3 ENSG00000177476 CDS Human protein_coding chr1:247769172 chr1:247769173 nonsynonymous SNV 0.081 3 22 hPsi_associated_SNPs_21304 0 0 0 0 0 unknown 0.438718766467037 0.438696044472981 0.37005914 0 hPsi_site_15028 iPseU_CNN:0.37005914;iRNA_PseU:0 15029 chr1 171753102 171753102 1 + G A UCEC 171753101 + 171753081 171753121 41 TTGGACAAGGGCACCCTGGATGCTGTCCTGACAGATGAGGA TTGGACAAGGGCACCCTGGATACTGTCCTGACAGATGAGGA < 41bp 0.469917962395007 0.854190107156874 0.35836726 0.8025032 prediction 0.708380214313748 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753101 chr1:171753102 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_21305 0 0 1 0 1 Ribosome 0.438718533403366 0.438718929442918 0.6050064 0 hPsi_site_15029 iPseU_CNN:0.6050064;iRNA_PseU:0 15030 chr4 41984280 41984280 1 + G A HNSC 41984279 + 41984259 41984299 41 AGATGCTCCAAGCTGTGCAGTGCTGCTCCCAGCGTCGCGGT AGATGCTCCAAGCTGTGCAGTACTGCTCCCAGCGTCGCGGT < 41bp 0.473198565138485 0.85418270211912 0.25910753 0.82475686 prediction 0.70836540423824 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984279 chr4:41984280 synonymous SNV . 0 22 hPsi_associated_SNPs_21306 0 0 0 0 0 Nucleus 0.438927562065482 0.441168315346629 0.64951372 0 hPsi_site_15030 iPseU_CNN:0.64951372;iRNA_PseU:0 15031 chr16 56782220 56782220 1 + G A CESC 56782219 + 56782199 56782239 41 GAACAGCTTGCTGCTGAGACTGAGGGCATCTCAGAGCTTCC GAACAGCTTGCTGCTGAGACTAAGGGCATCTCAGAGCTTCC < 41bp 0.481572353493209 0.854177279182042 0.21343529 0.3869389 prediction 0.708354558364084 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56782219 chr16:56782220 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21307 0 0 1 0 1 Nucleus 0.438716014960381 0.438706905426022 0 0 hPsi_site_15031 iPseU_CNN:0;iRNA_PseU:0 15032 chr1 90399468 90399468 1 + G A LIHC 90399467 + 90399447 90399487 41 ACAATCCTGGATAAAAAGGATGGAGAGCAGGCCAAAGCCCT ACAATCCTGGATAAAAAGGATAGAGAGCAGGCCAAAGCCCT < 41bp 0.481556603471684 0.854172762718679 0.27673164 0.39727452 prediction 0.708345525437358 Functional Gain - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90399467 chr1:90399468 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_21308 0 0 1 0 0 Nucleus 0.438718592994192 0.438718594982239 0 0 hPsi_site_15032 iPseU_CNN:0;iRNA_PseU:0 15033 chr7 5330386 5330386 1 + G A BLCA 5330385 + 5330365 5330405 41 TTGGACGAGCCAGTGCCCGATGACCGTTATCACGCCATCTA TTGGACGAGCCAGTGCCCGATAACCGTTATCACGCCATCTA < 41bp 0.456728735848525 0.854170869893339 0.22489816 0.6778894 prediction 0.708341739786678 Functional Gain - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5330385 chr7:5330386 nonsynonymous SNV 0.875 4 22 hPsi_associated_SNPs_21309 0 0 1 0 1 Endoplasmic reticulum 0.438704485263152 0.438717786689494 0.3557788 0 hPsi_site_15033 iPseU_CNN:0.3557788;iRNA_PseU:0 15034 chr12 97147658 97147658 1 + G A LUSC 97147657 + 97147637 97147677 41 GAGGAACATGAGGTGGAAGCTGAAATCCTTTTTCAGAAAGG GAGGAACATGAGGTGGAAGCTAAAATCCTTTTTCAGAAAGG < 41bp 0.494425728267727 0.854169753331292 0.55513585 0.90241027 prediction 0.708339506662584 Functional Gain - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:97147657 chr12:97147658 nonsynonymous SNV 0.963 4 22 hPsi_associated_SNPs_21310 0 0 0 0 1 exosome 0.438718592167211 0.438719528880882 0.69454884 0 hPsi_site_15034 iPseU_CNN:0.69454884;iRNA_PseU:0 15035 chr1 246810592 246810592 1 + G A STAD 246810591 + 246810571 246810611 41 AAAGGACCACATGGAGGAGCTGCTCTGCAGCGCTGAAGCCA AAAGGACCACATGGAGGAGCTACTCTGCAGCGCTGAAGCCA < 41bp 0.46377263042383 0.854160600041089 0.19424906 0.8185828 prediction 0.708321200082178 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810591 chr1:246810592 synonymous SNV . 0 22 hPsi_associated_SNPs_21311 0 0 1 0 0 Ribosome 0.437643886085036 0.438937051859263 0.6371656 0 hPsi_site_15035 iPseU_CNN:0.6371656;iRNA_PseU:0 15036 chr14 65008125 65008125 1 + G A KIRP 65008124 + 65008104 65008144 41 GGCGGCCATCGCCTACGGCCTGGACAAGAAGGGCTGCGCGG GGCGGCCATCGCCTACGGCCTAGACAAGAAGGGCTGCGCGG < 41bp 0.469332999323445 0.854160117726657 0.26290533 0.5185428 prediction 0.708320235453314 Functional Gain - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65008124 chr14:65008125 synonymous SNV . 0 22 hPsi_associated_SNPs_21312 0 0 0 0 0 Cytosol 0.438718598045375 0.438718582791952 0.0370855999999999 0 hPsi_site_15036 iPseU_CNN:0.0370855999999999;iRNA_PseU:0 15037 chr9 32408557 32408557 1 + G A LUSC 32408556 + 32408536 32408576 41 TGCTGCAATGCGTGATGCTGTGAAAAAGTTAGGAGGAGATC TGCTGCAATGCGTGATGCTGTAAAAAAGTTAGGAGGAGATC < 41bp 0.529616702893309 0.883775518787585 0.31768593 0.5005376 prediction 0.708317631788552 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32408556 chr9:32408557 synonymous SNV . 0 22 hPsi_associated_SNPs_21313 0 0 1 0 2 Ribosome 0.438700120607619 0.438708989751297 0.00107520000000005 0 hPsi_site_15037 iPseU_CNN:0.00107520000000005;iRNA_PseU:0 15038 chr11 67200453 67200453 1 + G A UCEC 67200452 + 67200432 67200472 41 AACTGACCGACTTTGGACTCTGCAAGGAGTCTATCCATGAG AACTGACCGACTTTGGACTCTACAAGGAGTCTATCCATGAG < 41bp 0.459965762222516 0.854151776930421 0.2655122 0.4640888 prediction 0.708303553860843 Functional Gain - RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67200452 chr11:67200453 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21314 0 0 1 1 1 Ribosome 0.438717718054061 0.438715888622474 0 0 hPsi_site_15038 iPseU_CNN:0;iRNA_PseU:0 15039 chr1 29651765 29651765 1 + G A STAD 29651764 + 29651744 29651784 41 CGGTCCTGGAGATGATCCGCTGCCACAACTTGGTGGACGTT CGGTCCTGGAGATGATCCGCTACCACAACTTGGTGGACGTT < 41bp 0.525392580143967 0.879536939167676 0.2380378 0.5568694 prediction 0.708288718047418 Functional Gain - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29651764 chr1:29651765 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_21315 0 0 1 0 2 Endoplasmic reticulum 0.439255050463816 0.438658918641763 0.1137388 0 hPsi_site_15039 iPseU_CNN:0.1137388;iRNA_PseU:0 15040 chr15 75122542 75122542 1 + G A SKCM 75122541 + 75122521 75122561 41 GCCCCGGGAGCTGGCCAAGATGATCGAGGAGGACACAGAGG GCCCCGGGAGCTGGCCAAGATAATCGAGGAGGACACAGAGG < 41bp 0.467092525511046 0.854142936298861 0.27650785 0.744282 prediction 0.708285872597723 Functional Gain - CPLX3 ENSG00000213578 CDS Human protein_coding chr15:75122541 chr15:75122542 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21316 0 0 0 0 1 exosome 0.438718641795364 0.43871859299553 0.488564 0 hPsi_site_15040 iPseU_CNN:0.488564;iRNA_PseU:0 15041 chr1 44169751 44169751 1 + G A BLCA 44169750 + 44169730 44169770 41 GATGATGTATACACACTGGATGAAGAGCTTCCCAAGAGAGT GATGATGTATACACACTGGATAAAGAGCTTCCCAAGAGAGT < 41bp 0.475057231006947 0.85414199139538 0.31783652 0.49175602 prediction 0.70828398279076 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44169750 chr1:44169751 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21317 0 0 1 0 2 Nucleus 0.48426178065322 0.431688057044205 0 0 hPsi_site_15041 iPseU_CNN:0;iRNA_PseU:0 15042 chr19 19218754 19218754 1 + G A HNSC 19218753 + 19218733 19218773 41 CATCTCGAGAGAAGAGGGGCTGAAGACTCTCTACCATGGAT CATCTCGAGAGAAGAGGGGCTAAAGACTCTCTACCATGGAT < 41bp 0.460742488918884 0.854139570544148 0.30993304 0.4593189 prediction 0.708279141088296 Functional Gain - SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19218753 chr19:19218754 synonymous SNV . 0 22 hPsi_associated_SNPs_21318 0 0 1 0 1 Endoplasmic reticulum 0.438725177834081 0.438718248917227 0 0 hPsi_site_15042 iPseU_CNN:0;iRNA_PseU:0 15043 chr17 39406013 39406013 1 + G A UCEC 39406012 + 39405992 39406032 41 CTTGCTGTCAGCCTACATGCTGCAGGACCACCTGCTGCAGG CTTGCTGTCAGCCTACATGCTACAGGACCACCTGCTGCAGG < 41bp 0.511717569220056 0.865843574202879 0.28274345 0.70642465 prediction 0.708252009965648 Functional Gain - KRTAP9-4 ENSG00000241595 CDS Human protein_coding chr17:39406012 chr17:39406013 nonsynonymous SNV 0.861 1 22 hPsi_associated_SNPs_21319 0 0 0 0 0 unknown 0.438703481022778 0.438728451295733 0.4128493 0 hPsi_site_15043 iPseU_CNN:0.4128493;iRNA_PseU:0 15044 chr1 111434048 111434048 1 + G A COAD 111434047 + 111434027 111434067 41 CGGCATGGGCATGAGTAGCTTGAAACTGCTGAAGTATGTCC CGGCATGGGCATGAGTAGCTTAAAACTGCTGAAGTATGTCC < 41bp 0.518827316063102 0.872948419214391 0.26864576 0.28721774 prediction 0.708242206302579 Functional Gain - CD53 ENSG00000143119 CDS Human protein_coding chr1:111434047 chr1:111434048 synonymous SNV . 0 22 hPsi_associated_SNPs_21320 0 0 0 0 2 Endoplasmic reticulum 0.438685726566782 0.438718490777005 0 0 hPsi_site_15044 iPseU_CNN:0;iRNA_PseU:0 15045 chr10 88415933 88415933 1 + G A rs192643153 88415932 + 88415912 88415952 41 GCACCTGGGACTTGGGCTGCTGCCTGGGTCCCCCTCCCCAC GCACCTGGGACTTGGGCTGCTACCTGGGTCCCCCTCCCCAC < 41bp 0.460939575261668 0.854120643971871 0.20108148 0.7479187 prediction 0.708241287943743 Functional Gain - OPN4 ENSG00000122375 CDS Human protein_coding chr10:88415932 chr10:88415933 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_21321 0 0 0 0 1 exosome 0.439126723750468 0.438717011635399 0.4958374 0 hPsi_site_15045 iPseU_CNN:0.4958374;iRNA_PseU:0 15046 chr17 4349438 4349438 1 + G A BLCA 4349437 + 4349417 4349457 41 CGTCCTGGGCGACCTCTTCGTGAGGGACCAGCGCACCCGCG CGTCCTGGGCGACCTCTTCGTAAGGGACCAGCGCACCCGCG < 41bp 0.450080437230381 0.854116520972104 0.29185525 0.91712296 prediction 0.708233041944207 Functional Gain - SPNS3 ENSG00000182557 CDS Human protein_coding chr17:4349437 chr17:4349438 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21322 0 0 0 0 2 exosome 0.438718587345614 0.438718592994907 0.83424592 0 hPsi_site_15046 iPseU_CNN:0.83424592;iRNA_PseU:0 15047 chr11 130332061 130332061 1 + G A STAD 130332060 + 130332040 130332080 41 GCTCCGAGCCAACCACATGATGTCCCCGACCCTCATCCAGA GCTCCGAGCCAACCACATGATATCCCCGACCCTCATCCAGA < 41bp 0.541838641943341 0.895953357401653 0.2616449 0.59376574 prediction 0.708229430916624 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130332060 chr11:130332061 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_21323 0 0 0 0 2 exosome 0.438718320142927 0.43871285160303 0.18753148 0 hPsi_site_15047 iPseU_CNN:0.18753148;iRNA_PseU:0 15048 chr17 72477957 72477957 1 + G A SKCM 72477956 + 72477936 72477976 41 ACCACCAAGGGAGGTGGAGGTGGAATACAGCACTGTGGTAA ACCACCAAGGGAGGTGGAGGTAGAATACAGCACTGTGGTAA < 41bp 0.520069551994625 0.87417601843541 0.3237896 0.784025 prediction 0.708212932881569 Functional Gain - CD300A ENSG00000167851 CDS Human protein_coding chr17:72477956 chr17:72477957 synonymous SNV . 0 22 hPsi_associated_SNPs_21324 0 0 0 0 2 Endoplasmic reticulum 0.438718597662184 0.438664858047598 0.56805 0 hPsi_site_15048 iPseU_CNN:0.56805;iRNA_PseU:0 15049 chr1 28862414 28862414 1 + G A HNSC 28862413 + 28862393 28862433 41 GGTCCCCAAGTGTGTGATGCTGAAATCCAGGGGAAGCCGGG GGTCCCCAAGTGTGTGATGCTAAAATCCAGGGGAAGCCGGG < 41bp 0.448660588364706 0.854086449175099 0.3000962 0.6570789 prediction 0.708172898350199 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862413 chr1:28862414 synonymous SNV . 0 22 hPsi_associated_SNPs_21325 0 0 1 0 1 Ribosome 0.438615600944183 0.438719376856141 0.3141578 0 hPsi_site_15049 iPseU_CNN:0.3141578;iRNA_PseU:0 15050 chr7 142880922 142880922 1 + G A SKCM 142880921 + 142880901 142880941 41 GCTCAGTTTCTTCTACTTTGTGAAGATTGCCAATTTCTCCT GCTCAGTTTCTTCTACTTTGTAAAGATTGCCAATTTCTCCT < 41bp 0.512399251525716 0.866475176343682 0.20592862 0.28382546 prediction 0.708151849635932 Functional Gain - TAS2R39 ENSG00000236398 CDS Human protein_coding chr7:142880921 chr7:142880922 synonymous SNV . 0 22 hPsi_associated_SNPs_21326 0 0 0 0 0 unknown 0.438711841024202 0.438435091569307 0 0 hPsi_site_15050 iPseU_CNN:0;iRNA_PseU:0 15051 chr17 7329988 7329988 1 + G A SKCM 7329987 + 7329967 7330007 41 GGGCCACCAGGGTGGTATCCTGGCCAGTCTGCCACCACCCT GGGCCACCAGGGTGGTATCCTAGCCAGTCTGCCACCACCCT < 41bp 0.468714609833636 0.854074127795061 0.32595557 0.41627318 prediction 0.708148255590122 Functional Gain - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329987 chr17:7329988 nonsynonymous SNV 0.953 0 22 hPsi_associated_SNPs_21327 0 0 0 0 0 exosome 0.438722958818593 0.438718603192092 0 0 hPsi_site_15051 iPseU_CNN:0;iRNA_PseU:0 15052 chr20 25657546 25657546 1 + G A UCEC 25657545 + 25657525 25657565 41 GGAAAATGCCATGGGCTTAGTGCTTTTTTCTTTCTCTTGAC GGAAAATGCCATGGGCTTAGTACTTTTTTCTTTCTCTTGAC < 41bp 0.501610704165189 0.855677353643615 0.197389 0.31842113 prediction 0.708133298956851 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25657545 chr20:25657546 synonymous SNV . 0 22 hPsi_associated_SNPs_21328 0 0 1 0 0 Cytosol 0.438718594876107 0.438718446979354 0 0 hPsi_site_15052 iPseU_CNN:0;iRNA_PseU:0 15053 chr2 101185461 101185461 1 + G A BLCA 101185460 + 101185440 101185480 41 GACGAGTTTAATGAGGAGGATGAACGTGCTATTGAAATGTA GACGAGTTTAATGAGGAGGATAAACGTGCTATTGAAATGTA < 41bp 0.51972480560884 0.873789533238792 0.40235198 0.6596563 prediction 0.708129455259904 Functional Gain - PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101185460 chr2:101185461 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21329 0 0 1 0 2 exosome 0.438718591300842 0.438718813660611 0.3193126 0 hPsi_site_15053 iPseU_CNN:0.3193126;iRNA_PseU:0 15054 chr19 55670651 55670651 1 + C T rs114601492 55670652 - 55670632 55670672 41 CTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTCCGCC CTGGGCAACACTGTCCCAGCTATGGAACCCGGAACTCCGCC < 41bp 0.474348054319565 0.854060781130996 0.48441783 0.36365545 prediction 0.708121562261993 Functional Gain - DNAAF3 ENSG00000167646;ENSG00000267110 CDS Human other chr19:55670652 chr19:55670651 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_21330 5 0 0 0 0 nucleolus 0.438718693156822 0.438718828876498 0 0 hPsi_site_15054 iPseU_CNN:0;iRNA_PseU:0 15055 chr1 40737653 40737653 1 + G A BLCA 40737652 + 40737632 40737672 41 GGAAAGCTTAAAGAAGAAATTGAAGTAATGGCAAAGAGTAT GGAAAGCTTAAAGAAGAAATTAAAGTAATGGCAAAGAGTAT < 41bp 0.512980401222729 0.867040099901877 0.2801195 0.30337262 prediction 0.708119397358296 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40737652 chr1:40737653 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21331 0 0 1 0 2 Endoplasmic reticulum 0.438718943417213 0.438718438992147 0 0 hPsi_site_15055 iPseU_CNN:0;iRNA_PseU:0 15056 chr16 69356565 69356565 1 + G A COAD 69356564 + 69356544 69356584 41 ATGGAGATGACTTGGATGGATGTCCCTGGGGACAAACTCTT ATGGAGATGACTTGGATGGATATCCCTGGGGACAAACTCTT < 41bp 0.479723902751949 0.854051583826677 0.25341892 0.39412367 prediction 0.708103167653353 Functional Gain - VPS4A ENSG00000132612 CDS Human protein_coding chr16:69356564 chr16:69356565 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_21332 0 0 1 0 1 Cytosol 0.438718441786815 0.438718487697109 0 0 hPsi_site_15056 iPseU_CNN:0;iRNA_PseU:0 15057 chr13 79189871 79189871 1 + C T LUAD 79189872 - 79189852 79189892 41 TGGGTCATCTTTGTTTAAGATGTCCTCAGAGATGCACAGTC TGGGTCATCTTTGTTTAAGATATCCTCAGAGATGCACAGTC < 41bp 0.512639623487888 0.866688465997634 0.24494988 0.33519158 prediction 0.708097685019492 Functional Gain - RNF219 ENSG00000152193 CDS Human protein_coding chr13:79189872 chr13:79189871 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21333 0 0 1 0 0 Cytosol 0.438719581660928 0.438718712036359 0 0 hPsi_site_15057 iPseU_CNN:0;iRNA_PseU:0 15058 chr10 95421831 95421831 1 + G A LUAD 95421830 + 95421810 95421850 41 TTGCAGGTAGCACTTATGGTTGCAAATGAATTTTGGGAACA TTGCAGGTAGCACTTATGGTTACAAATGAATTTTGGGAACA < 41bp 0.518231528897337 0.872278971727375 0.21961963 0.7760574 prediction 0.708094885660076 Functional Gain - PDE6C ENSG00000095464 CDS Human protein_coding chr10:95421830 chr10:95421831 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21334 0 0 0 0 2 Nucleus 0.438710360735084 0.438728755272163 0.5521148 0 hPsi_site_15058 iPseU_CNN:0.5521148;iRNA_PseU:0 15059 chr11 57982721 57982721 1 + G A LGG 57982720 + 57982700 57982740 41 TGGTTCCTCAGTAATATTATTGCTCTGACACACACCCTTCT TGGTTCCTCAGTAATATTATTACTCTGACACACACCCTTCT < 41bp 0.508021443031078 0.86206394540628 0.1991097 0.29769164 prediction 0.708085004750405 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57982720 chr11:57982721 nonsynonymous SNV 0.095 1 22 hPsi_associated_SNPs_21335 0 0 0 0 0 unknown 0.438980652564059 0.439969803136495 0 0 hPsi_site_15059 iPseU_CNN:0;iRNA_PseU:0 15060 chr16 68288909 68288909 1 + G A GBM 68288908 + 68288888 68288928 41 CTTTGGGAAGACCTTCTCACTGGAGTTCCTGGACCCCAGCA CTTTGGGAAGACCTTCTCACTAGAGTTCCTGGACCCCAGCA < 41bp 0.478813681725776 0.854039820862653 0.27966398 0.31804952 prediction 0.708079641725306 Functional Gain - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68288908 chr16:68288909 stopgain 0.963 0 22 hPsi_associated_SNPs_21336 0 0 0 0 2 Ribosome 0.438718592994916 0.438745826860234 0 0 hPsi_site_15060 iPseU_CNN:0;iRNA_PseU:0 15061 chr5 180651801 180651801 1 + C T LUAD 180651802 - 180651782 180651822 41 CTTCTCTCACCTTGTACTCCTGCACCACCTCCTCCAATGGC CTTCTCTCACCTTGTACTCCTACACCACCTCCTCCAATGGC < 41bp 0.51221617745249 0.866255012621528 0.17423275 0.24654666 prediction 0.708077670338075 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651802 chr5:180651801 stopgain 1.000 1 22 hPsi_associated_SNPs_21337 0 0 0 0 0 chromatin 0.438718507451785 0.438719132944899 0 0 hPsi_site_15061 iPseU_CNN:0;iRNA_PseU:0 15062 chr3 112999939 112999939 1 + G A COAD 112999938 + 112999918 112999958 41 GACCTCCTACGACATTAAGATGCAGTGCTTCAATGAAGGAG GACCTCCTACGACATTAAGATACAGTGCTTCAATGAAGGAG < 41bp 0.458257495946702 0.854034944841348 0.28956312 0.34980184 prediction 0.708069889682696 Functional Gain - BOC ENSG00000144857 CDS Human protein_coding chr3:112999938 chr3:112999939 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21338 0 0 0 0 2 nucleoplasm 0.438717258026528 0.438718119316728 0 0 hPsi_site_15062 iPseU_CNN:0;iRNA_PseU:0 15063 chr22 38084913 38084913 1 + G A LUAD 38084912 + 38084892 38084932 41 AAGACGGAGTCGGTGCAGTATGACCACCCCAACCACACAGT AAGACGGAGTCGGTGCAGTATAACCACCCCAACCACACAGT < 41bp 0.471942809236121 0.854030590585626 0.28529477 0.6843494 prediction 0.708061181171253 Functional Gain - NOL12 ENSG00000100101 CDS Human protein_coding chr22:38084912 chr22:38084913 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_21339 0 0 1 0 2 Cytosol 0.438798687165427 0.438712719015936 0.3686988 0 hPsi_site_15063 iPseU_CNN:0.3686988;iRNA_PseU:0 15064 chr16 58036471 58036471 1 + G A STAD 58036470 + 58036450 58036490 41 ACCGAGGAGGGGCCTGAAGATGACAGCACAAAACACGGGGG ACCGAGGAGGGGCCTGAAGATAACAGCACAAAACACGGGGG < 41bp 0.451855827541418 0.85402576432295 0.28947312 0.3487635 prediction 0.708051528645899 Functional Gain - USB1 ENSG00000103005 CDS Human protein_coding chr16:58036470 chr16:58036471 nonsynonymous SNV 0.962 2 22 hPsi_associated_SNPs_21340 0 0 1 1 3 Ribosome 0.438718593264648 0.438718609579938 0 0 hPsi_site_15064 iPseU_CNN:0;iRNA_PseU:0 15065 chr19 57867832 57867832 1 + G A CESC 57867831 + 57867811 57867851 41 GTGAGTCCATGCAGAAGGACTGAATGCATGGAGTCTTTCCC GTGAGTCCATGCAGAAGGACTAAATGCATGGAGTCTTTCCC < 41bp 0.481126122993979 0.854011335671819 0.29475796 0.3605839 prediction 0.708022671343639 Functional Gain - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57867831 chr19:57867832 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_21341 0 0 1 0 0 chromatin 0.438718604955915 0.438718594852871 0 0 hPsi_site_15065 iPseU_CNN:0;iRNA_PseU:0 15066 chr5 159398905 159398905 1 + G A LIHC 159398904 + 159398884 159398924 41 AGGCTCCTTGTTCTCCACCCTGAAGCCCCCCGACGCCGTGT AGGCTCCTTGTTCTCCACCCTAAAGCCCCCCGACGCCGTGT < 41bp 0.519311779456047 0.873321682704092 0.23874423 0.30912513 prediction 0.70801980649609 Functional Gain - ADRA1B ENSG00000170214 CDS Human protein_coding chr5:159398904 chr5:159398905 synonymous SNV . 0 22 hPsi_associated_SNPs_21342 0 0 0 0 1 exosome 0.438718592995098 0.438718592994709 0 0 hPsi_site_15066 iPseU_CNN:0;iRNA_PseU:0 15067 chr3 122126189 122126189 1 + G A PRAD 122126188 + 122126168 122126208 41 AAGATCAGCTATCTAATGATTGCCCTGACGGTGGTAGGATG AAGATCAGCTATCTAATGATTACCCTGACGGTGGTAGGATG < 41bp 0.514329151982215 0.868333348152099 0.3212199 0.5427407 prediction 0.708008392339767 Functional Gain - FAM162A ENSG00000114023 CDS Human protein_coding chr3:122126188 chr3:122126189 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_21343 0 0 1 0 2 Ribosome 0.42095580112864 0.438022194214119 0.0854813999999999 0 hPsi_site_15067 iPseU_CNN:0.0854813999999999;iRNA_PseU:0 15068 chr1 101194738 101194738 1 + G A UCEC 101194737 + 101194717 101194757 41 GAGACTCAGTCATGTTGACATGTAGTGTCATGGGCTGTGAA GAGACTCAGTCATGTTGACATATAGTGTCATGGGCTGTGAA < 41bp 0.513242469371822 0.867238971708634 0.27050608 0.3060276 prediction 0.707993004673625 Functional Gain - VCAM1 ENSG00000162692 CDS Human protein_coding chr1:101194737 chr1:101194738 nonsynonymous SNV 0.319 4 22 hPsi_associated_SNPs_21344 0 0 0 0 1 exosome 0.43606682442581 0.435249468535802 0 0 hPsi_site_15068 iPseU_CNN:0;iRNA_PseU:0 15069 chr19 38861280 38861280 1 + G A LGG 38861279 + 38861259 38861299 41 TGGAAGATAAACAACCTCATTGCCTCAGAATCCTACTACAC TGGAAGATAAACAACCTCATTACCTCAGAATCCTACTACAC < 41bp 0.474335040787124 0.853992610691365 0.33910543 0.5701028 prediction 0.70798522138273 Functional Gain - CATSPERG ENSG00000099338 CDS Human protein_coding chr19:38861279 chr19:38861280 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21345 0 0 0 0 0 chromatin 0.438718588670154 0.438715403239955 0.1402056 0 hPsi_site_15069 iPseU_CNN:0.1402056;iRNA_PseU:0 15070 chr7 90895755 90895755 1 + G A CESC 90895754 + 90895734 90895774 41 CTTCCGCATCCGCACCATCATGAAGCACGATGGCACCAAGA CTTCCGCATCCGCACCATCATAAAGCACGATGGCACCAAGA < 41bp 0.477841896014435 0.853992203242974 0.16809821 0.3974824 prediction 0.707984406485947 Functional Gain - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90895754 chr7:90895755 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21346 0 0 0 0 0 Endoplasmic reticulum 0.438709973048073 0.438698638963704 0 0 hPsi_site_15070 iPseU_CNN:0;iRNA_PseU:0 15071 chr19 51919237 51919237 1 + C T rs199590261 51919238 - 51919218 51919258 41 GGGGCTGGAGCTGCCCGGGGTGAAGGCTGGGGATTCAGGGC GGGGCTGGAGCTGCCCGGGGTAAAGGCTGGGGATTCAGGGC < 41bp 0.458912007242937 0.853984465817938 0.3396363 0.6862285 prediction 0.707968931635876 Functional Gain - SIGLEC10 ENSG00000142512 CDS Human protein_coding chr19:51919238 chr19:51919237 synonymous SNV . 0 22 hPsi_associated_SNPs_21347 0 0 0 0 0 exosome 0.43871879303731 0.438718592994963 0.372457 0 hPsi_site_15071 iPseU_CNN:0.372457;iRNA_PseU:0 15072 chr10 104160764 104160764 1 + G A DLBC 104160763 + 104160743 104160783 41 ACACCCCTGCACCTGGCAGCTGGACTGGGGTACCCGACCCT ACACCCCTGCACCTGGCAGCTAGACTGGGGTACCCGACCCT < 41bp 0.451647231923167 0.853978377301321 0.18912393 0.3412938 prediction 0.707956754602642 Functional Gain - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160763 chr10:104160764 nonsynonymous SNV 0.676 4 22 hPsi_associated_SNPs_21348 0 0 1 0 2 chromatin 0.438710303430334 0.438721326236487 0 0 hPsi_site_15072 iPseU_CNN:0;iRNA_PseU:0 15073 chrX 70522288 70522288 1 + G A BLCA 70522287 + 70522267 70522307 41 ACTATGGGACCACACTGTGCTGAGAAGCTTCCTGAGGCCCC ACTATGGGACCACACTGTGCTAAGAAGCTTCCTGAGGCCCC < 41bp 0.534730672030127 0.888700221393163 0.27709165 0.3695071 prediction 0.70793909872607 Functional Gain - ITGB1BP2 ENSG00000147166 CDS Human protein_coding chrX:70522287 chrX:70522288 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21349 0 0 1 0 1 exosome 0.438718100004955 0.438717536883096 0 0 hPsi_site_15073 iPseU_CNN:0;iRNA_PseU:0 15074 chr20 33508433 33508433 1 + G A UCEC 33508432 + 33508412 33508452 41 ATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGG ATGCAGAGGATGTGTTCTGGTACACGGCAGACATTGGTTGG < 41bp 0.455915551481118 0.853959528296855 0.17170691 0.61411905 prediction 0.707919056593709 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33508432 chr20:33508433 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21350 0 0 1 0 1 Ribosome 0.438718301668179 0.438714106272424 0.2282381 0 hPsi_site_15074 iPseU_CNN:0.2282381;iRNA_PseU:0 15075 chr12 6575088 6575088 1 + C T BLCA 6575089 - 6575069 6575109 41 TCAGAGCTGGATGACCGAGCTGATGCCTTGCAGGCAGGAGC TCAGAGCTGGATGACCGAGCTAATGCCTTGCAGGCAGGAGC < 41bp 0.453696218945208 0.853959234548673 0.15700033 0.19682252 prediction 0.707918469097345 Functional Gain - VAMP1 ENSG00000139190 CDS Human protein_coding chr12:6575089 chr12:6575088 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_21351 0 0 1 0 2 chromatin 0.438718596681572 0.438698784419607 0 0 hPsi_site_15075 iPseU_CNN:0;iRNA_PseU:0 15076 chr16 31131776 31131776 1 + G A CESC 31131775 + 31131755 31131795 41 AGCGAGCTCGCAGAGCAGCCTGAGCGCAAGATCACTCGCAA AGCGAGCTCGCAGAGCAGCCTAAGCGCAAGATCACTCGCAA < 41bp 0.530708983871237 0.884660493352289 0.2231422 0.40172404 prediction 0.707903018962103 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131775 chr16:31131776 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_21352 0 0 1 0 1 Ribosome 0.438718593353984 0.438718592989658 0 0 hPsi_site_15076 iPseU_CNN:0;iRNA_PseU:0 15077 chr20 29628258 29628258 1 + G A UCEC 29628257 + 29628237 29628277 41 CTTTGTTGGCCTCAAATAGCTGCTTTATTAGATGCAATGAA CTTTGTTGGCCTCAAATAGCTACTTTATTAGATGCAATGAA < 41bp 0.521703451655442 0.875647549145037 0.27616996 0.35876787 prediction 0.707888194979189 Functional Gain - FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29628257 chr20:29628258 nonsynonymous SNV 0.984 2 22 hPsi_associated_SNPs_21353 0 0 0 0 2 unknown 0.396981775103574 0.423167527022157 0 0 hPsi_site_15077 iPseU_CNN:0;iRNA_PseU:0 15078 chr11 66192083 66192083 1 + G A COAD 66192082 + 66192062 66192102 41 CAGTTTTCTCTATGAGAAGTTGCCCCCAAGTCCTAGCAGCC CAGTTTTCTCTATGAGAAGTTACCCCCAAGTCCTAGCAGCC < 41bp 0.461647926569195 0.853934780063341 0.25290835 0.6554976 prediction 0.707869560126682 Functional Gain - NPAS4 ENSG00000174576 CDS Human protein_coding chr11:66192082 chr11:66192083 synonymous SNV . 0 22 hPsi_associated_SNPs_21354 0 0 0 0 0 unknown 0.438718526181407 0.438718592053698 0.3109952 0 hPsi_site_15078 iPseU_CNN:0.3109952;iRNA_PseU:0 15079 chr12 13221285 13221285 1 + G A LUSC 13221284 + 13221264 13221304 41 TGAAGGCACCAGATTCCAACTGCAGCAACCTTCTGATTACA TGAAGGCACCAGATTCCAACTACAGCAACCTTCTGATTACA < 41bp 0.462912170083132 0.853929779239796 0.2219409 0.30114275 prediction 0.707859558479592 Functional Gain - FAM234B ENSG00000084444 CDS Human protein_coding chr12:13221284 chr12:13221285 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21355 0 0 1 0 2 Nucleus 0.437039492839732 0.438032643133773 0 0 hPsi_site_15079 iPseU_CNN:0;iRNA_PseU:0 15080 chr14 50790702 50790702 1 + G A UCEC 50790701 + 50790681 50790721 41 AAAAAATAAGGCTGTGCAAGTGTCATTATATCGAGGATGAC AAAAAATAAGGCTGTGCAAGTATCATTATATCGAGGATGAC < 41bp 0.466589307712304 0.853928089461705 0.25177163 0.58435893 prediction 0.707856178923409 Functional Gain - ATP5S ENSG00000125375 CDS Human protein_coding chr14:50790701 chr14:50790702 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21356 0 0 1 0 1 Cytosol 0.444598623656199 0.444734624465547 0.16871786 0 hPsi_site_15080 iPseU_CNN:0.16871786;iRNA_PseU:0 15081 chrX 75648983 75648983 1 + G A rs782347260 75648982 + 75648962 75649002 41 GCTCGCCGCCACTGAGGGCCTGAGCACCTCCGTGCAGGCCA GCTCGCCGCCACTGAGGGCCTAAGCACCTCCGTGCAGGCCA < 41bp 0.48170690542335 0.853927381214024 0.3427797 0.43683088 prediction 0.707854762428047 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75648982 chrX:75648983 synonymous SNV . 0 22 hPsi_associated_SNPs_21357 0 0 0 0 0 membrane 0.43868790579673 0.438718825854451 0 0 hPsi_site_15081 iPseU_CNN:0;iRNA_PseU:0 15082 chr16 67662374 67662374 1 + G A LIHC 67662373 + 67662353 67662393 41 CCAGAAGCAGCTTCTCGACATGCACTTCAAGCGCTATCACG CCAGAAGCAGCTTCTCGACATACACTTCAAGCGCTATCACG < 41bp 0.452583106544703 0.853923685816145 0.3731274 0.7327402 prediction 0.70784737163229 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67662373 chr16:67662374 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21358 0 0 1 0 1 Nucleus 0.438756042752919 0.438718416020731 0.4654804 0 hPsi_site_15082 iPseU_CNN:0.4654804;iRNA_PseU:0 15083 chr17 68129360 68129360 1 + G A KIRP 68129359 + 68129339 68129379 41 CGAAGGTCATTTAGTGCAGTTGCCATTGTCAGCAGCTGTGA CGAAGGTCATTTAGTGCAGTTACCATTGTCAGCAGCTGTGA < 41bp 0.512612870373187 0.866533853318712 0.25478527 0.49121988 prediction 0.70784196589105 Functional Gain - KCNJ16 ENSG00000153822 CDS Human protein_coding chr17:68129359 chr17:68129360 nonsynonymous SNV 0.722 1 22 hPsi_associated_SNPs_21359 0 0 0 0 0 chromatin 0.410976081532665 0.442391349562805 0 0 hPsi_site_15083 iPseU_CNN:0;iRNA_PseU:0 15084 chr19 56669916 56669916 1 + G A UCEC 56669915 + 56669895 56669935 41 AACGAGGGTGCCTCAGGATGTGACGCAGGGCCCTGGGGCCA AACGAGGGTGCCTCAGGATGTAACGCAGGGCCCTGGGGCCA < 41bp 0.53209832021939 0.886011632839924 0.45414686 0.8098093 prediction 0.707826625241068 Functional Gain - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56669915 chr19:56669916 synonymous SNV . 0 22 hPsi_associated_SNPs_21360 0 0 1 0 2 Cytosol 0.438718592994807 0.438718592995102 0.6196186 0 hPsi_site_15084 iPseU_CNN:0.6196186;iRNA_PseU:0 15085 chrX 26212336 26212336 1 + G A SKCM 26212335 + 26212315 26212355 41 GGTGTTTCAGGCTCAAAATATGATGTGGCTGCCAACGGCCA GGTGTTTCAGGCTCAAAATATAATGTGGCTGCCAACGGCCA < 41bp 0.512524445410529 0.86642857610202 0.24822891 0.29491752 prediction 0.707808261382981 Functional Gain - MAGEB6 ENSG00000176746 CDS Human protein_coding chrX:26212335 chrX:26212336 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21361 0 0 0 0 0 unknown 0.438705342092193 0.439324028177301 0 0 hPsi_site_15085 iPseU_CNN:0;iRNA_PseU:0 15086 chr11 5906064 5906064 1 + G A UCEC 5906063 + 5906043 5906083 41 ACATCGTACCTCACACATACTGTGAGCACAGGGGTCTGGCC ACATCGTACCTCACACATACTATGAGCACAGGGGTCTGGCC < 41bp 0.485913560963776 0.853896686905881 0.268368 0.6183444 prediction 0.707793373811761 Functional Gain - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5906063 chr11:5906064 nonsynonymous SNV 0.952 4 22 hPsi_associated_SNPs_21362 0 0 0 0 0 unknown 0.438731060088454 0.437916263081069 0.2366888 0 hPsi_site_15086 iPseU_CNN:0.2366888;iRNA_PseU:0 15087 chr4 156136049 156136049 1 + G A COAD 156136048 + 156136028 156136068 41 ATCGCCATGTGCTCCACTTTTGCCAATCCCCTTCTCTATGG ATCGCCATGTGCTCCACTTTTACCAATCCCCTTCTCTATGG < 41bp 0.523628168864061 0.8775217420036 0.29513702 0.41146797 prediction 0.707787146279078 Functional Gain - NPY2R ENSG00000185149 CDS Human protein_coding chr4:156136048 chr4:156136049 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_21363 0 0 0 0 0 unknown 0.438718592594588 0.438718584566281 0 0 hPsi_site_15087 iPseU_CNN:0;iRNA_PseU:0 15088 chr11 6261681 6261681 1 + C A GBM 6261680 + 6261660 6261700 41 GCGCCTGCGGCGCCAGTACCTCTATAGCTTTTACTTCTCCA GCGCCTGCGGCGCCAGTACCTATATAGCTTTTACTTCTCCA < 41bp 0.501496114472916 0.855381253037519 0.2357207 0.3135351 prediction 0.707770277129207 Functional Gain - CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6261680 chr11:6261681 synonymous SNV . 0 22 hPsi_associated_SNPs_21364 0 0 0 0 0 exosome 0.438718590364775 0.438718576381129 0 0 hPsi_site_15088 iPseU_CNN:0;iRNA_PseU:0 15089 chr11 65167226 65167226 1 + G A BLCA 65167225 + 65167205 65167245 41 AGGTGTGCCTTCTTCCACGGTGAGGTTGACAAGCCGGCCCA AGGTGTGCCTTCTTCCACGGTAAGGTTGACAAGCCGGCCCA < 41bp 0.45269812794056 0.853869418246491 0.29593843 0.38343054 prediction 0.707738836492981 Functional Gain - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65167225 chr11:65167226 nonsynonymous SNV 0.926 2 22 hPsi_associated_SNPs_21365 0 0 1 0 1 Ribosome 0.438718839762237 0.438718592995073 0 0 hPsi_site_15089 iPseU_CNN:0;iRNA_PseU:0 15090 chr2 113940585 113940585 1 + G A SKCM 113940584 + 113940564 113940604 41 GGAAGGGCTCAAGGCTGGGCTGAAATGCTGTCTCCCCACGC GGAAGGGCTCAAGGCTGGGCTAAAATGCTGTCTCCCCACGC < 41bp 0.504564385673287 0.858426295793192 0.34955037 0.66616964 prediction 0.70772382023981 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940584 chr2:113940585 synonymous SNV . 0 22 hPsi_associated_SNPs_21366 0 0 1 0 0 chromatin 0.438718592994709 0.438718592995101 0.33233928 0 hPsi_site_15090 iPseU_CNN:0.33233928;iRNA_PseU:0 15091 chr15 34355519 34355519 1 + G A UCEC 34355518 + 34355498 34355538 41 ACTTTTGGCACTGCCATTGCTGCCTTCTACATCCCTGTTTC ACTTTTGGCACTGCCATTGCTACCTTCTACATCCCTGTTTC < 41bp 0.522507361885687 0.876362697206919 0.30442214 0.55496305 prediction 0.707710670642464 Functional Gain - CHRM5 ENSG00000184984 CDS Human protein_coding chr15:34355518 chr15:34355519 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_21367 0 0 0 0 0 cytosol 0.438418049994097 0.438712927565077 0.1099261 0 hPsi_site_15091 iPseU_CNN:0.1099261;iRNA_PseU:0 15092 chr2 86716503 86716503 1 + G A STAD 86716502 + 86716482 86716522 41 CTTCACTTAGATGTATCTGATGCAGCTAATGTCATGGTCTA CTTCACTTAGATGTATCTGATACAGCTAATGTCATGGTCTA < 41bp 0.46738559762943 0.853845618537714 0.25784963 0.31717652 prediction 0.707691237075427 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86716502 chr2:86716503 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21368 0 0 1 0 2 chromatin 0.438733591223564 0.438718484606835 0 0 hPsi_site_15092 iPseU_CNN:0;iRNA_PseU:0 15093 chr10 47665119 47665119 1 + G A UCEC 47665118 + 47665098 47665138 41 CACAGACGGCCAGACTGTCTTGCCACTCACCTCAGACAAGT CACAGACGGCCAGACTGTCTTACCACTCACCTCAGACAAGT < 41bp 0.505753407443159 0.859598988363735 0.28866225 0.57734644 prediction 0.707691161841153 Functional Gain - ANTXRL ENSG00000198250 CDS Human other chr10:47665118 chr10:47665119 synonymous SNV . 0 22 hPsi_associated_SNPs_21369 0 0 0 4 2 exosome 0.431092791127454 0.438328521693126 0.15469288 0 hPsi_site_15093 iPseU_CNN:0.15469288;iRNA_PseU:0 15094 chr17 42427841 42427841 1 + G A COAD 42427840 + 42427820 42427860 41 GTGAAGACAGGGTGCACTGCTGTCCGCACGGTGCCTTCTGC GTGAAGACAGGGTGCACTGCTATCCGCACGGTGCCTTCTGC < 41bp 0.531952313455112 0.885796992205379 0.32767358 0.68511075 prediction 0.707689357500534 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42427840 chr17:42427841 nonsynonymous SNV 0.969 5 22 hPsi_associated_SNPs_21370 0 0 1 0 1 Endoplasmic reticulum 0.438724947048974 0.438719183281321 0.3702215 0 hPsi_site_15094 iPseU_CNN:0.3702215;iRNA_PseU:0 15095 chr12 113346511 113346511 1 + G A SKCM 113346510 + 113346490 113346530 41 AAGAGAGAGAGCATTTTCCGTGAAGTTTGAGGTCCAGGCTC AAGAGAGAGAGCATTTTCCGTAAAGTTTGAGGTCCAGGCTC < 41bp 0.532865215189592 0.886703165907856 0.390589 0.5410523 prediction 0.70767590143653 Functional Gain - OAS1 ENSG00000089127 CDS Human protein_coding chr12:113346510 chr12:113346511 synonymous SNV . 0 22 hPsi_associated_SNPs_21371 0 0 0 0 0 Ribosome 0.438667521203988 0.438718599809932 0.0821046000000001 0 hPsi_site_15095 iPseU_CNN:0.0821046000000001;iRNA_PseU:0 15096 chr7 143747629 143747629 1 + G A rs61738793 143747628 + 143747608 143747648 41 GCTGGGAAATGGGGCCATCCTGGGGCTCATCTGGCTGGACT GCTGGGAAATGGGGCCATCCTAGGGCTCATCTGGCTGGACT < 41bp 0.485903833514516 0.853834283117561 0.21798909 0.4564924 prediction 0.707668566235122 Functional Gain - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143747628 chr7:143747629 synonymous SNV . 0 22 hPsi_associated_SNPs_21372 0 0 0 0 0 unknown 0.438718592995722 0.438718592995069 0 0 hPsi_site_15096 iPseU_CNN:0;iRNA_PseU:0 15097 chr16 88665043 88665043 1 + G A HNSC 88665042 + 88665022 88665062 41 CAATAGGGTGGGCCGGTAGTTGATGAAATTTTGCCTCCACC CAATAGGGTGGGCCGGTAGTTAATGAAATTTTGCCTCCACC < 41bp 0.532470047746561 0.886293262965222 0.32262567 0.74838173 prediction 0.707646430437323 Functional Gain - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88665042 chr16:88665043 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_21373 0 0 1 0 1 chromatin 0.438718592995103 0.438718592995102 0.49676346 0 hPsi_site_15097 iPseU_CNN:0.49676346;iRNA_PseU:0 15098 chr9 127570148 127570148 1 + G A BLCA 127570147 + 127570127 127570167 41 GCGCCACGAGGGAGCCTGGATGAAGGACCCTGCAGCTCGAG GCGCCACGAGGGAGCCTGGATAAAGGACCCTGCAGCTCGAG < 41bp 0.537776551172893 0.891594534272719 0.4021749 0.73321307 prediction 0.707635966199653 Functional Gain - OLFML2A ENSG00000185585 CDS Human protein_coding chr9:127570147 chr9:127570148 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21374 0 0 0 0 2 Nucleus 0.438680291843972 0.438768443019851 0.46642614 0 hPsi_site_15098 iPseU_CNN:0.46642614;iRNA_PseU:0 15099 chr14 24573135 24573135 1 + G A rs144940239 24573134 + 24573114 24573154 41 CTGCCCAAAGAGGTGTTGGCTGAGCTTGAGGCCCTGGAGAG CTGCCCAAAGAGGTGTTGGCTAAGCTTGAGGCCCTGGAGAG < 41bp 0.521875874214504 0.87569027893399 0.345984 0.67666924 prediction 0.707628809438972 Functional Gain - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24573134 chr14:24573135 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_21375 0 0 1 0 0 Endoplasmic reticulum 0.438718891757982 0.438716095712267 0.35333848 0 hPsi_site_15099 iPseU_CNN:0.35333848;iRNA_PseU:0 15100 chr3 139065880 139065880 1 + G A SKCM 139065879 + 139065859 139065899 41 GCTAATGACTCAGGCACAGTTGGAAGAGGTACGTGAATGCA GCTAATGACTCAGGCACAGTTAGAAGAGGTACGTGAATGCA < 41bp 0.485663299426178 0.853805060021086 0.3279478 0.42296067 prediction 0.707610120042172 Functional Gain - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065879 chr3:139065880 synonymous SNV . 0 22 hPsi_associated_SNPs_21376 0 0 1 0 1 Ribosome 0.438857498305147 0.438662511467923 0 0 hPsi_site_15100 iPseU_CNN:0;iRNA_PseU:0 15101 chr19 10404831 10404831 1 + G A LIHC 10404830 + 10404810 10404850 41 ACAGCCAAGCGTGAAGTGCGTGGGCTCCGGGGGCGCCACTG ACAGCCAAGCGTGAAGTGCGTAGGCTCCGGGGGCGCCACTG < 41bp 0.530474364218917 0.884275435556606 0.33541602 0.81207395 prediction 0.707602142675379 Functional Gain - ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10404830 chr19:10404831 synonymous SNV . 0 22 hPsi_associated_SNPs_21377 0 0 1 0 0 Endoplasmic reticulum 0.438718898223665 0.438717404695191 0.6241479 0 hPsi_site_15101 iPseU_CNN:0.6241479;iRNA_PseU:0 15102 chr12 7273217 7273217 1 + G A rs138860772 7273216 + 7273196 7273236 41 ATGGACACAGCCCCAGGATGTGCAGGGTGAGTCCCCAGGGA ATGGACACAGCCCCAGGATGTACAGGGTGAGTCCCCAGGGA < 41bp 0.481990927081805 0.853784507227823 0.31123683 0.674819 prediction 0.707569014455646 Functional Gain - C1RL-AS1 ENSG00000205885 ncRNA_exonic Human antisense chr12:7273216 chr12:7273217 . . 0 22 hPsi_associated_SNPs_21378 0 0 1 0 0 unknown 0.43871864710991 0.438719199891744 0.349638 0 hPsi_site_15102 iPseU_CNN:0.349638;iRNA_PseU:0 15103 chr22 45243893 45243893 1 + G A UCEC 45243892 + 45243872 45243912 41 GTTCCGGAGATCCGCCAGCGTGCAGACCGTCCGCGAGATCC GTTCCGGAGATCCGCCAGCGTACAGACCGTCCGCGAGATCC < 41bp 0.447411362606447 0.853783675775943 0.24831358 0.39304256 prediction 0.707567351551886 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45243892 chr22:45243893 synonymous SNV . 0 22 hPsi_associated_SNPs_21379 0 0 1 0 2 unknown 0.434008067873333 0.433947334795462 0 0 hPsi_site_15103 iPseU_CNN:0;iRNA_PseU:0 15104 chr17 41004014 41004014 1 + G A LGG 41004013 + 41003993 41004033 41 GACCACGGCTCCCCGTGGTCTGCAATCAGGGGACCGGGCCA GACCACGGCTCCCCGTGGTCTACAATCAGGGGACCGGGCCA < 41bp 0.449127761686642 0.853777710083463 0.35152644 0.41747552 prediction 0.707555420166925 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41004013 chr17:41004014 synonymous SNV . 0 22 hPsi_associated_SNPs_21380 0 0 0 0 0 Cytosol 0.438718593004444 0.438718593401411 0 0 hPsi_site_15104 iPseU_CNN:0;iRNA_PseU:0 15105 chr1 35250837 35250837 1 + G A OV 35250836 + 35250816 35250856 41 TCTCTGGCATGGCTTCAATATGCCGCGCCTGGTGCAGTGTG TCTCTGGCATGGCTTCAATATACCGCGCCTGGTGCAGTGTG < 41bp 0.461630155441634 0.85377693503632 0.30375278 0.4801016 prediction 0.707553870072639 Functional Gain - GJB3 ENSG00000188910 CDS Human protein_coding chr1:35250836 chr1:35250837 nonsynonymous SNV 0.476 2 22 hPsi_associated_SNPs_21381 0 0 0 0 0 Ribosome 0.438717337573328 0.438673084077642 0 0 hPsi_site_15105 iPseU_CNN:0;iRNA_PseU:0 15106 chr6 159166593 159166593 1 + G A UCEC 159166592 + 159166572 159166612 41 GTCACTGGAGAAATAGAATTTGCCATTCATTATTGCTTCAA GTCACTGGAGAAATAGAATTTACCATTCATTATTGCTTCAA < 41bp 0.458356034695211 0.853775175832481 0.20068851 0.25248647 prediction 0.707550351664961 Functional Gain - SYTL3 ENSG00000164674 CDS Human protein_coding chr6:159166592 chr6:159166593 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_21382 0 0 0 0 2 exosome 0.438328013588618 0.438436823743752 0 0 hPsi_site_15106 iPseU_CNN:0;iRNA_PseU:0 15107 chr12 122690945 122690945 1 + G A SKCM 122690944 + 122690924 122690964 41 GCTCGGCTGCCTGCTCTTCCTGAGGAAGGCGGCCAAGCCCG GCTCGGCTGCCTGCTCTTCCTAAGGAAGGCGGCCAAGCCCG < 41bp 0.471368234292362 0.853773288177567 0.2454603 0.5384464 prediction 0.707546576355135 Functional Gain - B3GNT4 ENSG00000176383 CDS Human protein_coding chr12:122690944 chr12:122690945 synonymous SNV . 0 22 hPsi_associated_SNPs_21383 0 0 0 0 1 chromatin 0.438718593007273 0.438718691056121 0.0768928 0 hPsi_site_15107 iPseU_CNN:0.0768928;iRNA_PseU:0 15108 chr18 28989531 28989531 1 + G A SKCM 28989530 + 28989510 28989550 41 GTGATGCAGTCTTGGAGAATTGAAGGGGCCCATCCCGAGGA GTGATGCAGTCTTGGAGAATTAAAGGGGCCCATCCCGAGGA < 41bp 0.469473323950526 0.853766498672496 0.36129996 0.44202363 prediction 0.707532997344992 Functional Gain - DSG4 ENSG00000175065 CDS Human protein_coding chr18:28989530 chr18:28989531 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_21384 0 0 0 0 0 exosome 0.438719107396154 0.438717260176554 0 0 hPsi_site_15108 iPseU_CNN:0;iRNA_PseU:0 15109 chr10 70644430 70644430 1 + G A ACC 70644429 + 70644409 70644449 41 TGTCTGCGGAGCACCACATTTGTGAGAGCACCAAACCTTTA TGTCTGCGGAGCACCACATTTATGAGAGCACCAAACCTTTA < 41bp 0.463282428999971 0.853753390490542 0.32388562 0.39895988 prediction 0.707506780981083 Functional Gain - STOX1 ENSG00000165730 CDS Human protein_coding chr10:70644429 chr10:70644430 nonsynonymous SNV 0.247 1 22 hPsi_associated_SNPs_21385 0 0 0 0 0 Endoplasmic reticulum 0.425960662170423 0.437841962135521 0 0 hPsi_site_15109 iPseU_CNN:0;iRNA_PseU:0 15110 chr19 50387799 50387799 1 + G A KIRP 50387798 + 50387778 50387818 41 GATGCTTTCTGGTGTTTCTGTGGCTTCATGGAGCTCGTGGT GATGCTTTCTGGTGTTTCTGTAGCTTCATGGAGCTCGTGGT < 41bp 0.456250632406398 0.853748793556658 0.26780993 0.49918103 prediction 0.707497587113315 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50387798 chr19:50387799 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_21386 0 0 1 0 2 membrane 0.438709178508112 0.438718771158559 0 0 hPsi_site_15110 iPseU_CNN:0;iRNA_PseU:0 15111 chr8 117950650 117950650 1 + G A LUSC 117950649 + 117950629 117950669 41 CCTCGCCGCCAGCCCGCTGCTGGAGGACCTCAGACGACGGC CCTCGCCGCCAGCCCGCTGCTAGAGGACCTCAGACGACGGC < 41bp 0.467522093166707 0.853744157343141 0.35174048 0.49169263 prediction 0.707488314686281 Functional Gain - AARD ENSG00000205002 CDS Human protein_coding chr8:117950649 chr8:117950650 synonymous SNV . 0 22 hPsi_associated_SNPs_21387 0 0 0 0 0 exosome 0.438718591509977 0.438719100529871 0 0 hPsi_site_15111 iPseU_CNN:0;iRNA_PseU:0 15112 chr12 64202608 64202608 1 + G A LUAD 64202607 + 64202587 64202627 41 CATTCCTGTGGTGGAAGACGTGATGACAGCTGGCAACTGTG CATTCCTGTGGTGGAAGACGTAATGACAGCTGGCAACTGTG < 41bp 0.462807588210303 0.853739328270899 0.27189237 0.3482121 prediction 0.707478656541797 Functional Gain - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64202607 chr12:64202608 synonymous SNV . 0 22 hPsi_associated_SNPs_21388 0 0 1 0 0 Endoplasmic reticulum 0.438721009425949 0.438718423787085 0 0 hPsi_site_15112 iPseU_CNN:0;iRNA_PseU:0 15113 chr14 89039186 89039186 1 + G A LGG 89039185 + 89039165 89039205 41 TGGTGTTCATTTAAACAGGTTGCAATTTCAACAGCAGCAGA TGGTGTTCATTTAAACAGGTTACAATTTCAACAGCAGCAGA < 41bp 0.471986412853174 0.853718963859543 0.2523749 0.35955468 prediction 0.707437927719085 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89039185 chr14:89039186 synonymous SNV . 0 22 hPsi_associated_SNPs_21389 0 0 1 0 0 Nucleus 0.438725044081109 0.438890629246719 0 0 hPsi_site_15113 iPseU_CNN:0;iRNA_PseU:0 15114 chr2 101619209 101619209 1 + G A LAML 101619208 + 101619188 101619228 41 GAGAAGAAAAAGGGCCGTTCTGCCATCAACGAAGTGGTAAC GAGAAGAAAAAGGGCCGTTCTACCATCAACGAAGTGGTAAC < 41bp 0.517708731179536 0.871416760378532 0.43027288 0.77646273 prediction 0.707416058397991 Functional Gain - RPL31 ENSG00000071082 CDS Human protein_coding chr2:101619208 chr2:101619209 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21390 0 0 1 0 1 Cytosol 0.438718593753055 0.438718658138988 0.55292546 0 hPsi_site_15114 iPseU_CNN:0.55292546;iRNA_PseU:0 15115 chr1 32560490 32560490 1 + G A BLCA 32560489 + 32560469 32560509 41 CTGCTGCCTGCCAGCTACTGTGACCTGCTGCACAAGGCCGC CTGCTGCCTGCCAGCTACTGTAACCTGCTGCACAAGGCCGC < 41bp 0.455448893576136 0.853704286003821 0.2552523 0.40073198 prediction 0.707408572007642 Functional Gain - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32560489 chr1:32560490 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21391 0 0 1 3 1 chromatin 0.43872054390857 0.438718592922949 0 0 hPsi_site_15115 iPseU_CNN:0;iRNA_PseU:0 Red cell distribution width 15116 chr1 44137280 44137280 1 + G A STAD 44137279 + 44137259 44137299 41 GCAGCTGCCTTGGATCTTTCTGTGAATCCTGCGTCTGTAGG GCAGCTGCCTTGGATCTTTCTATGAATCCTGCGTCTGTAGG < 41bp 0.458150524112807 0.853698608776562 0.38603577 0.45032966 prediction 0.707397217553124 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44137279 chr1:44137280 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21392 0 0 1 0 0 Nucleus 0.438718488971927 0.438718598742919 0 0 hPsi_site_15116 iPseU_CNN:0;iRNA_PseU:0 15117 chr8 96166339 96166339 1 + G A SKCM 96166338 + 96166318 96166358 41 AGTATAGTGGAAAACTGTTTTGGAGCAGCTGGTCAACCTTT AGTATAGTGGAAAACTGTTTTAGAGCAGCTGGTCAACCTTT < 41bp 0.491043266164112 0.853690413496541 0.25106904 0.42110437 prediction 0.707380826993082 Functional Gain - PLEKHF2 ENSG00000175895 CDS Human protein_coding chr8:96166338 chr8:96166339 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21393 0 0 1 0 1 Cytosol 0.438718571331271 0.438718740622931 0 0 hPsi_site_15117 iPseU_CNN:0;iRNA_PseU:0 15118 chr17 80395135 80395135 1 + G A COAD 80395134 + 80395114 80395154 41 CACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCACC CACGGGGCCCAGCCAGGCCGTACCCCCTGTTGAGCACCACC < 41bp 0.448559082426567 0.853688730167112 0.24158147 0.54750514 prediction 0.707377460334224 Functional Gain - HEXDC ENSG00000169660 CDS Human protein_coding chr17:80395134 chr17:80395135 synonymous SNV . 0 22 hPsi_associated_SNPs_21394 0 0 1 0 1 Ribosome 0.438718556910981 0.438713315338961 0.0950102799999999 0 hPsi_site_15118 iPseU_CNN:0.0950102799999999;iRNA_PseU:0 15119 chr13 103309409 103309409 1 + G A CESC 103309408 + 103309388 103309428 41 CTCTCTCCACATTCGTAGGATGTAATCCCTGTTCATTACTA CTCTCTCCACATTCGTAGGATATAATCCCTGTTCATTACTA < 41bp 0.4920957615402 0.853681826032287 0.562372 0.70250213 prediction 0.707363652064574 Functional Gain - TPP2 ENSG00000134900 CDS Human protein_coding chr13:103309408 chr13:103309409 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_21395 0 0 1 0 1 Nucleus 0.43830352032307 0.437564728669674 0.28026026 0 hPsi_site_15119 iPseU_CNN:0.28026026;iRNA_PseU:0 15120 chr22 24036042 24036042 1 + G A UCEC 24036041 + 24036021 24036061 41 CACATGGCACCCACAGTTCGTGCCACCATCGCACACTTCAA CACATGGCACCCACAGTTCGTACCACCATCGCACACTTCAA < 41bp 0.541877381821226 0.895548555024915 0.23164031 0.74593586 prediction 0.707342346407378 Functional Gain - RGL4 ENSG00000159496 CDS Human protein_coding chr22:24036041 chr22:24036042 nonsynonymous SNV 0.011 4 22 hPsi_associated_SNPs_21396 0 0 0 0 1 chromatin 0.438777673003549 0.43872984707118 0.49187172 0 hPsi_site_15120 iPseU_CNN:0.49187172;iRNA_PseU:0 Mean corpuscular hemoglobin 15121 chr15 52497199 52497199 1 + G A UCEC 52497198 + 52497178 52497218 41 GTCCAGGCCGTTCTGGCACATGGTGGTGTAAAAGTAGCTCA GTCCAGGCCGTTCTGGCACATAGTGGTGTAAAAGTAGCTCA < 41bp 0.478593041512476 0.853649196039346 0.21207157 0.2746945 prediction 0.707298392078691 Functional Gain - MYO5C ENSG00000128833 CDS Human protein_coding chr15:52497198 chr15:52497199 synonymous SNV . 0 22 hPsi_associated_SNPs_21397 0 0 0 1 0 Nucleus 0.438718751015423 0.438616891732565 0 0 hPsi_site_15121 iPseU_CNN:0;iRNA_PseU:0 15122 chr9 107266943 107266943 1 + G A rs1403811 107266942 + 107266922 107266962 41 TGCAACCCCCTGAGATACCCTGTCATCATGAATAGGAGAAC TGCAACCCCCTGAGATACCCTATCATCATGAATAGGAGAAC < 41bp 0.485182051251975 0.853638458194505 0.1441206 0.20612708 prediction 0.707276916389009 Functional Gain - OR13F1 ENSG00000186881 CDS Human protein_coding chr9:107266942 chr9:107266943 nonsynonymous SNV 0.824 0 22 hPsi_associated_SNPs_21398 0 0 0 0 0 unknown 0.438411186828285 0.438654482732992 0 0 hPsi_site_15122 iPseU_CNN:0;iRNA_PseU:0 15123 chr1 171755182 171755182 1 + G A rs2232819 171755181 + 171755161 171755201 41 TGAGCTGTCGGCTAGAGTCATGGAGCTGGCCCCAGCTGGGA TGAGCTGTCGGCTAGAGTCATAGAGCTGGCCCCAGCTGGGA < 41bp 0.453323794266082 0.853628821381611 0.1846624 0.30921814 prediction 0.707257642763223 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171755181 chr1:171755182 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21399 0 0 1 0 1 Ribosome 0.4387185930174 0.438724838353286 0 0 hPsi_site_15123 iPseU_CNN:0;iRNA_PseU:0 15124 chr1 24669201 24669201 1 + G A STAD 24669200 + 24669180 24669220 41 GCAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAAGC GCAGGGAGCTGAGAGGAAGATACGCGATGACGAGCGGAAGC < 41bp 0.450439388670947 0.853626131847364 0.277547 0.8180674 prediction 0.707252263694728 Functional Gain - GRHL3 ENSG00000158055 CDS Human protein_coding chr1:24669200 chr1:24669201 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_21400 0 0 0 0 2 Nucleus 0.438718546339383 0.438718593404142 0.6361348 0 hPsi_site_15124 iPseU_CNN:0.6361348;iRNA_PseU:0 15125 chr22 38211153 38211153 1 + G A GBM 38211152 + 38211132 38211172 41 GAAGCATCGGCTGCGCCTGGTGGCCACTGATGGGGCCTTTT GAAGCATCGGCTGCGCCTGGTAGCCACTGATGGGGCCTTTT < 41bp 0.452583681458608 0.85362283981006 0.17469269 0.2823851 prediction 0.70724567962012 Functional Gain - GCAT ENSG00000100116 CDS Human protein_coding chr22:38211152 chr22:38211153 synonymous SNV . 0 22 hPsi_associated_SNPs_21401 0 0 1 0 1 Cytosol 0.43871859299544 0.438718590828135 0 0 hPsi_site_15125 iPseU_CNN:0;iRNA_PseU:0 15126 chr21 45545972 45545972 1 + C A rs565582089 45545971 + 45545951 45545991 41 TGCTGGGCAGGAGGATGGAGTCGCGATACCACTGCCAGGCG TGCTGGGCAGGAGGATGGAGTAGCGATACCACTGCCAGGCG < 41bp 0.502582348226483 0.856202297150983 0.19701514 0.5660979 prediction 0.707239897849001 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45545971 chr21:45545972 synonymous SNV . 0 22 hPsi_associated_SNPs_21402 0 0 1 0 2 Nucleus 0.438720666163582 0.4387181447254 0.1321958 0 hPsi_site_15126 iPseU_CNN:0.1321958;iRNA_PseU:0 15127 chr22 31656013 31656013 1 + G A OV 31656012 + 31655992 31656032 41 AGGCAGGCGGGGCTTCTCCGTGTCCGTGGAGAGTGCCTGCT AGGCAGGCGGGGCTTCTCCGTATCCGTGGAGAGTGCCTGCT < 41bp 0.539306192313456 0.892925953633728 0.37551752 0.6300031 prediction 0.707239522640545 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31656012 chr22:31656013 synonymous SNV . 0 22 hPsi_associated_SNPs_21403 0 0 0 0 0 Cytosol 0.438718553739304 0.438719240904313 0.2600062 0 hPsi_site_15127 iPseU_CNN:0.2600062;iRNA_PseU:0 15128 chr19 2790474 2790474 1 + G A UCEC 2790473 + 2790453 2790493 41 GTGCTCTGTGGTAAACGACCTGCGGTGGGACCTGAGTGCCC GTGCTCTGTGGTAAACGACCTACGGTGGGACCTGAGTGCCC < 41bp 0.458032048180518 0.853613078612117 0.30250728 0.68474185 prediction 0.707226157224235 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2790473 chr19:2790474 synonymous SNV . 0 22 hPsi_associated_SNPs_21404 0 0 1 0 1 Ribosome 0.438723370307057 0.438713192873145 0.3694837 0 hPsi_site_15128 iPseU_CNN:0.3694837;iRNA_PseU:0 15129 chr10 126673421 126673421 1 + G A COAD 126673420 + 126673400 126673440 41 ACGGAGGGGGGAGTTCTGGTTGCCATGCAGAAGAGTTCTCG ACGGAGGGGGGAGTTCTGGTTACCATGCAGAAGAGTTCTCG < 41bp 0.52235576804163 0.875960845637756 0.2705577 0.46142545 prediction 0.707210155192252 Functional Gain - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126673420 chr10:126673421 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21405 0 0 1 0 1 Ribosome 0.439291183354136 0.438739042203407 0 0 hPsi_site_15129 iPseU_CNN:0;iRNA_PseU:0 15130 chr20 6759218 6759218 1 + G A SKCM 6759217 + 6759197 6759237 41 GCACAGGGACACGCCAACCATGGATTCGTGGTGGAAGTGGC GCACAGGGACACGCCAACCATAGATTCGTGGTGGAAGTGGC < 41bp 0.526791653735263 0.880393704877369 0.22494689 0.3387751 prediction 0.707204102284213 Functional Gain - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6759217 chr20:6759218 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21406 0 0 1 0 0 Ribosome 0.433858282626602 0.438719336083117 0 0 hPsi_site_15130 iPseU_CNN:0;iRNA_PseU:0 15131 chr17 8219129 8219129 1 + G A UCEC 8219128 + 8219108 8219148 41 CCCCCCACATCAGCGACTTGTGTGATGTGGTGCATGCCCAC CCCCCCACATCAGCGACTTGTATGATGTGGTGCATGCCCAC < 41bp 0.444521372069259 0.853598759218535 0.74039555 0.8139045 prediction 0.707197518437071 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8219128 chr17:8219129 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_21407 0 0 0 0 2 exosome 0.434140640093913 0.417816101854146 0.1470179 0 hPsi_site_15131 iPseU_CNN:0.1470179;iRNA_PseU:0 15132 chr12 85695019 85695019 1 + G A GBM 85695018 + 85694998 85695038 41 ACGTGACACTTCCTCCTGTATGACACCTTATTCTCACTCGC ACGTGACACTTCCTCCTGTATAACACCTTATTCTCACTCGC < 41bp 0.512782390479733 0.866379396666537 0.2857772 0.532078 prediction 0.707194012373608 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85695018 chr12:85695019 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21408 0 0 0 0 1 nucleus 0.439102760519306 0.438493156261278 0.0641560000000001 0 hPsi_site_15132 iPseU_CNN:0.0641560000000001;iRNA_PseU:0 15133 chr1 1267145 1267145 1 + G A rs542570836 1267144 + 1267124 1267164 41 TTTGATACGTGCTCGGAGCCTGTGGTGGCCATGAAGCCCAG TTTGATACGTGCTCGGAGCCTATGGTGGCCATGAAGCCCAG < 41bp 0.492863330070338 0.853591014449488 0.41867375 0.7692571 prediction 0.707182028898975 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1267144 chr1:1267145 nonsynonymous SNV 0.232 1 22 hPsi_associated_SNPs_21409 0 0 0 0 0 chromatin 0.438718281198555 0.438718594944201 0.5385142 0 hPsi_site_15133 iPseU_CNN:0.5385142;iRNA_PseU:0 15134 chr22 50591608 50591608 1 + G A HNSC 50591607 + 50591587 50591627 41 CTTGCTGGGCTGGGAGAAGTTGCCTAAGAAAGGCTTCCCTC CTTGCTGGGCTGGGAGAAGTTACCTAAGAAAGGCTTCCCTC < 41bp 0.454541981983375 0.853589349386318 0.31640393 0.6876354 prediction 0.707178698772635 Functional Gain - MOV10L1 ENSG00000073146 CDS Human protein_coding chr22:50591607 chr22:50591608 synonymous SNV . 0 22 hPsi_associated_SNPs_21410 0 0 0 0 1 exosome 0.438718505473184 0.438701309828694 0.3752708 0 hPsi_site_15134 iPseU_CNN:0.3752708;iRNA_PseU:0 15135 chr17 77710899 77710899 1 + G A BRCA 77710898 + 77710878 77710918 41 TGACAACAAGGACATGGACATGAAGACCATCTTCCGCGCTG TGACAACAAGGACATGGACATAAAGACCATCTTCCGCGCTG < 41bp 0.526902820085876 0.880488767745247 0.21368062 0.32426527 prediction 0.707171895318742 Functional Gain - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77710898 chr17:77710899 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_21411 0 0 0 0 1 exosome 0.438770527049552 0.432027963055899 0 0 hPsi_site_15135 iPseU_CNN:0;iRNA_PseU:0 15136 chr1 26448766 26448766 1 + G A LGG 26448765 + 26448745 26448785 41 ACAGCAAAAGCTGACATCTTTGCTCTGGGGATTATCATCTG ACAGCAAAAGCTGACATCTTTACTCTGGGGATTATCATCTG < 41bp 0.49604058876127 0.853582865268068 0.41324583 0.7070414 prediction 0.707165730536137 Functional Gain - PDIK1L ENSG00000175087 CDS Human protein_coding chr1:26448765 chr1:26448766 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21412 0 0 1 0 0 exosome 0.438790727591183 0.438718371636751 0.4140828 0 hPsi_site_15136 iPseU_CNN:0.4140828;iRNA_PseU:0 15137 chr2 113742480 113742480 1 + G A UCEC 113742479 + 113742459 113742499 41 AAACCCTTCCTTTTCTACCGTGCCAAGACTGGTAGGACCTC AAACCCTTCCTTTTCTACCGTACCAAGACTGGTAGGACCTC < 41bp 0.481856490452632 0.853581933651751 0.23018882 0.37345043 prediction 0.707163867303502 Functional Gain - IL36G ENSG00000136688 CDS Human protein_coding chr2:113742479 chr2:113742480 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21413 0 0 0 0 1 exosome 0.43876958555427 0.438709666836179 0 0 hPsi_site_15137 iPseU_CNN:0;iRNA_PseU:0 15138 chr5 5303430 5303430 1 + G A COAD 5303429 + 5303409 5303449 41 AGTCGGACGTGTGGCGGGGGTGCCCAGAGCCGCCCCGTGCA AGTCGGACGTGTGGCGGGGGTACCCAGAGCCGCCCCGTGCA < 41bp 0.455101632354017 0.853563057211197 0.19683528 0.6194444 prediction 0.707126114422393 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5303429 chr5:5303430 nonsynonymous SNV 0.051 0 22 hPsi_associated_SNPs_21414 0 0 0 0 1 exosome 0.436566890837577 0.437492515528742 0.2388888 0 hPsi_site_15138 iPseU_CNN:0.2388888;iRNA_PseU:0 15139 chr11 100863290 100863290 1 + G A UCEC 100863289 + 100863269 100863309 41 GTCTCCTGTTGATTCGCAGATGTAATATCGAGTATTCATCA GTCTCCTGTTGATTCGCAGATATAATATCGAGTATTCATCA < 41bp 0.498771230639775 0.853549628765845 0.36225814 0.4077633 prediction 0.707099257531689 Functional Gain - TMEM133 ENSG00000170647 CDS Human protein_coding chr11:100863289 chr11:100863290 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21415 0 0 0 0 0 exosome 0.438726876770347 0.438776979742975 0 0 hPsi_site_15139 iPseU_CNN:0;iRNA_PseU:0 15140 chr3 8787268 8787268 1 + G A rs61147808 8787267 + 8787247 8787287 41 CACCTACAGCTTTGACGGCGTGTGGAAGGTGAGCTACACCA CACCTACAGCTTTGACGGCGTATGGAAGGTGAGCTACACCA < 41bp 0.489724820031425 0.853545748847373 0.18887374 0.2718824 prediction 0.707091497694746 Functional Gain - CAV3 ENSG00000182533 CDS Human protein_coding chr3:8787267 chr3:8787268 synonymous SNV . 0 22 hPsi_associated_SNPs_21416 8 0 0 0 1 exosome 0.438718631783177 0.438718600095873 0 0 hPsi_site_15140 iPseU_CNN:0;iRNA_PseU:0 15141 chr11 67818087 67818087 1 + G A LUAD 67818086 + 67818066 67818106 41 GACCGTGGCTATCCTGCTGGTGATGGAGGGACTCTCAGCCT GACCGTGGCTATCCTGCTGGTAATGGAGGGACTCTCAGCCT < 41bp 0.468532128034267 0.853538403116056 0.3346678 0.861321 prediction 0.707076806232112 Functional Gain - TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818086 chr11:67818087 synonymous SNV . 0 22 hPsi_associated_SNPs_21417 0 0 1 0 1 Nucleus 0.43870848203435 0.438717432966658 0.722642 0 hPsi_site_15141 iPseU_CNN:0.722642;iRNA_PseU:0 15142 chr10 135202527 135202527 1 + G A SKCM 135202526 + 135202506 135202546 41 TTCATGGAGACTCTGTCGGATGAAGAAGTACTTCTGTGTCT TTCATGGAGACTCTGTCGGATAAAGAAGTACTTCTGTGTCT < 41bp 0.530106347092786 0.883640356773271 0.47380176 0.7453667 prediction 0.70706801936097 Functional Gain - PAOX ENSG00000148832 CDS Human protein_coding chr10:135202526 chr10:135202527 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_21418 0 0 1 0 2 exosome 0.438721185686968 0.438737810754253 0.4907334 0 hPsi_site_15142 iPseU_CNN:0.4907334;iRNA_PseU:0 15143 chr1 63902532 63902532 1 + G A COAD 63902531 + 63902511 63902551 41 CACTATGGTGCTTCTGACGTTGATGACTGTCACACTGGATC CACTATGGTGCTTCTGACGTTAATGACTGTCACACTGGATC < 41bp 0.484111275919536 0.853524551701939 0.31285703 0.62412375 prediction 0.707049103403877 Functional Gain - ALG6 ENSG00000088035 CDS Human protein_coding chr1:63902531 chr1:63902532 synonymous SNV . 0 22 hPsi_associated_SNPs_21419 0 0 1 3 1 Endoplasmic reticulum 0.438508307045054 0.439077466480043 0.2482475 0 hPsi_site_15143 iPseU_CNN:0.2482475;iRNA_PseU:0 15144 chr1 32086455 32086455 1 + G A STAD 32086454 + 32086434 32086474 41 CGTGGGGCAGGCTGTGTCCGTGTCAGTGGCAGTGCTAACTC CGTGGGGCAGGCTGTGTCCGTATCAGTGGCAGTGCTAACTC < 41bp 0.464420463347411 0.853512284059108 0.6486492 0.81994545 prediction 0.707024568118215 Functional Gain - HCRTR1 ENSG00000121764 CDS Human protein_coding chr1:32086454 chr1:32086455 synonymous SNV . 0 22 hPsi_associated_SNPs_21420 0 0 0 0 1 Endoplasmic reticulum 0.438477486343898 0.438667597949338 0.3425925 0 hPsi_site_15144 iPseU_CNN:0.3425925;iRNA_PseU:0 15145 chr1 11561526 11561526 1 + G A ACC 11561525 + 11561505 11561545 41 CTCAGAGCAGCTGCAGCAGCTGCATCTCGGCAACCGCTCGC CTCAGAGCAGCTGCAGCAGCTACATCTCGGCAACCGCTCGC < 41bp 0.454222808710103 0.853505727167601 0.27846342 0.50067204 prediction 0.707011454335202 Functional Gain - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11561525 chr1:11561526 synonymous SNV . 0 22 hPsi_associated_SNPs_21421 0 0 0 0 0 exosome 0.438724470885651 0.438793322723759 0.00134407999999997 0 hPsi_site_15145 iPseU_CNN:0.00134407999999997;iRNA_PseU:0 15146 chr16 569771 569771 1 + G A BRCA 569770 + 569750 569790 41 GCAGGAGAAGCAGAAGCTGTTGGATGAGATAGAGTCGCTGA GCAGGAGAAGCAGAAGCTGTTAGATGAGATAGAGTCGCTGA < 41bp 0.46133833484516 0.853494624357931 0.28004324 0.46971568 prediction 0.706989248715863 Functional Gain - RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:569770 chr16:569771 synonymous SNV . 0 22 hPsi_associated_SNPs_21422 0 0 1 0 1 Ribosome 0.438553068046927 0.438774701540101 0 0 hPsi_site_15146 iPseU_CNN:0;iRNA_PseU:0 15147 chr2 7018191 7018191 1 + G A HNSC 7018190 + 7018170 7018210 41 CTCGCCAGTGCAACTACAAATGCGGCTTCTGTTTCCACACA CTCGCCAGTGCAACTACAAATACGGCTTCTGTTTCCACACA < 41bp 0.522241188361794 0.875733830815796 0.5250691 0.6454879 prediction 0.706985284908004 Functional Gain - RSAD2 ENSG00000134321 CDS Human protein_coding chr2:7018190 chr2:7018191 nonsynonymous SNV 0.821 5 22 hPsi_associated_SNPs_21423 0 0 0 0 1 exosome 0.438647263973477 0.438682688638266 0.2408376 0 hPsi_site_15147 iPseU_CNN:0.2408376;iRNA_PseU:0 15148 chr11 126201343 126201343 1 + G A CESC 126201342 + 126201322 126201362 41 CCCTGCCACAGAGAAACACCTGCAGAAGTACCTGCGCCAGG CCCTGCCACAGAGAAACACCTACAGAAGTACCTGCGCCAGG < 41bp 0.450737027196001 0.853489167285324 0.3331117 0.5420549 prediction 0.706978334570648 Functional Gain - DCPS ENSG00000110063 CDS Human protein_coding chr11:126201342 chr11:126201343 synonymous SNV . 0 22 hPsi_associated_SNPs_21424 0 0 0 0 1 Ribosome 0.438708613200478 0.438715467695407 0.0841098 0 hPsi_site_15148 iPseU_CNN:0.0841098;iRNA_PseU:0 15149 chr17 72436264 72436264 1 + G A LUSC 72436263 + 72436243 72436283 41 AAGCCCGACTTCTCCACCTGTGCCTCTCGGCGCTTCCTCTT AAGCCCGACTTCTCCACCTGTACCTCTCGGCGCTTCCTCTT < 41bp 0.537456190402571 0.890935815839329 0.27138457 0.71549296 prediction 0.706959250873515 Functional Gain - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436263 chr17:72436264 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21425 0 0 1 0 0 nucleus 0.438719332844672 0.43869838249958 0.43098592 0 hPsi_site_15149 iPseU_CNN:0.43098592;iRNA_PseU:0 15150 chr13 58209038 58209038 1 + G A CESC 58209037 + 58209017 58209057 41 CATGAACGTCATGAACGTGGTGAGCAGCCCCTCCCTGGCCA CATGAACGTCATGAACGTGGTAAGCAGCCCCTCCCTGGCCA < 41bp 0.469867613306034 0.853472687636949 0.28124607 0.42300513 prediction 0.706945375273899 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58209037 chr13:58209038 synonymous SNV . 0 22 hPsi_associated_SNPs_21426 0 0 0 0 0 exosome 0.440034086577022 0.438714815443832 0 0 hPsi_site_15150 iPseU_CNN:0;iRNA_PseU:0 15151 chr2 241979562 241979562 1 + G A rs78419445 241979561 + 241979541 241979581 41 GGTGGAGAATGGCTCTGCGGTGTGTGTGTGCCAGGCCGGAT GGTGGAGAATGGCTCTGCGGTATGTGTGTGCCAGGCCGGAT < 41bp 0.454037138282964 0.853468346290962 0.33438575 0.7857721 prediction 0.706936692581923 Functional Gain - SNED1 ENSG00000162804 CDS Human protein_coding chr2:241979561 chr2:241979562 synonymous SNV . 0 22 hPsi_associated_SNPs_21427 0 0 0 0 2 nucleus 0.438359252854808 0.438667917759823 0.5715442 0 hPsi_site_15151 iPseU_CNN:0.5715442;iRNA_PseU:0 15152 chr16 845797 845797 1 + G A rs61741082 845796 + 845776 845816 41 CCCTGCTCCTCGATGCCCTCTGCCTGCTCCTGGACATTCTT CCCTGCTCCTCGATGCCCTCTACCTGCTCCTGGACATTCTT < 41bp 0.466078672543004 0.853450985383691 0.3450599 0.81855875 prediction 0.706901970767383 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845796 chr16:845797 nonsynonymous SNV 0.095 1 22 hPsi_associated_SNPs_21428 0 0 1 0 1 Nucleus 0.438718594085006 0.438718593052102 0.6371175 0 hPsi_site_15152 iPseU_CNN:0.6371175;iRNA_PseU:0 15153 chr6 132891574 132891574 1 + G A UCEC 132891573 + 132891553 132891593 41 CCGGGTGATTCTGTACATAGTGTTTGGCTTTGGGGCTGTGC CCGGGTGATTCTGTACATAGTATTTGGCTTTGGGGCTGTGC < 41bp 0.497547892668784 0.853434652604587 0.28518194 0.5447288 prediction 0.706869305209174 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891573 chr6:132891574 synonymous SNV . 0 22 hPsi_associated_SNPs_21429 0 0 0 0 0 unknown 0.438653138834527 0.438598178155923 0.0894576 0 hPsi_site_15153 iPseU_CNN:0.0894576;iRNA_PseU:0 15154 chr12 6560159 6560159 1 + C T LUAD 6560160 - 6560140 6560180 41 TTGATCTATATTTCCTTCGTTGATGGAGGAACAGGGCCCCG TTGATCTATATTTCCTTCGTTAATGGAGGAACAGGGCCCCG < 41bp 0.468006614752928 0.853431608031593 0.2937764 0.7211919 prediction 0.706863216063186 Functional Gain - CD27 ENSG00000139193 CDS Human protein_coding chr12:6560160 chr12:6560159 stopgain 0.031 0 22 hPsi_associated_SNPs_21430 0 0 0 0 0 exosome 0.438393324490604 0.438718595512381 0.4423838 0 hPsi_site_15154 iPseU_CNN:0.4423838;iRNA_PseU:0 15155 chr7 158663899 158663899 1 + G A BLCA 158663898 + 158663878 158663918 41 AAGAAGCTGCGTAAGGAGTCTGAGATGGACCTTCCTGAACA AAGAAGCTGCGTAAGGAGTCTAAGATGGACCTTCCTGAACA < 41bp 0.485455628063242 0.853404821402851 0.29663086 0.43488207 prediction 0.706809642805703 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158663898 chr7:158663899 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21431 0 0 1 0 1 Nucleus 0.43871861443064 0.438731261502823 0 0 hPsi_site_15155 iPseU_CNN:0;iRNA_PseU:0 15156 chr4 109543328 109543328 1 + G A KIRC 109543327 + 109543307 109543347 41 GTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGG GTTGGGAAAGCACCAAAATCTACATGTGGTGTGTGCCCAGG < 41bp 0.474327955493887 0.853399865805788 0.23574021 0.405443 prediction 0.706799731611575 Functional Gain - RPL34 ENSG00000109475 CDS Human protein_coding chr4:109543327 chr4:109543328 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_21432 0 0 1 0 2 Nucleus 0.438718572184709 0.4387185913109 0 0 hPsi_site_15156 iPseU_CNN:0;iRNA_PseU:0 15157 chr1 202096931 202096931 1 + G A UCEC 202096930 + 202096910 202096950 41 GGGCATTGACCGCTTCCACGTGGCCACCAGCACCCTGCCCA GGGCATTGACCGCTTCCACGTAGCCACCAGCACCCTGCCCA < 41bp 0.533667369571522 0.887064922885387 0.22711116 0.72219425 prediction 0.706795106627729 Functional Gain - GPR37L1 ENSG00000170075 CDS Human protein_coding chr1:202096930 chr1:202096931 synonymous SNV . 0 22 hPsi_associated_SNPs_21433 0 0 0 0 1 Nucleus 0.437459186634774 0.43871256290982 0.4443885 0 hPsi_site_15157 iPseU_CNN:0.4443885;iRNA_PseU:0 15158 chr8 118184842 118184842 1 + G A UCEC 118184841 + 118184821 118184861 41 CCTTAGCAAAAGCTTTACGATGCACTCACTCACCATTCAGA CCTTAGCAAAAGCTTTACGATACACTCACTCACCATTCAGA < 41bp 0.481159464662055 0.853387985821364 0.82415855 0.98367065 prediction 0.706775971642729 Functional Gain - SLC30A8 ENSG00000164756 CDS Human protein_coding chr8:118184841 chr8:118184842 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_21434 0 0 0 0 1 membrane 0.475856389310106 0.438783193872525 0.3190242 0 hPsi_site_15158 iPseU_CNN:0.3190242;iRNA_PseU:0 15159 chr3 133305442 133305442 1 + G A GBM 133305441 + 133305421 133305461 41 GAACCAGCGATGACTAGTGGTGTGTATAGGCCTCCTGGGGC GAACCAGCGATGACTAGTGGTATGTATAGGCCTCCTGGGGC < 41bp 0.459031680152557 0.853380140847227 0.24989274 0.35821342 prediction 0.706760281694455 Functional Gain - CDV3 ENSG00000091527 CDS Human protein_coding chr3:133305441 chr3:133305442 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_21435 0 0 1 0 1 Ribosome 0.437424426858493 0.438543756330034 0 0 hPsi_site_15159 iPseU_CNN:0;iRNA_PseU:0 15160 chr1 152484105 152484105 1 + G A STAD 152484104 + 152484084 152484124 41 CTCCTAAGTGTCCTCCCAAGTGTCCCCCAAAATGCCCTCCC CTCCTAAGTGTCCTCCCAAGTATCCCCCAAAATGCCCTCCC < 41bp 0.5179942381237 0.871373982302051 0.24712086 0.50918204 prediction 0.706759488356702 Functional Gain - LCE5A ENSG00000186207 CDS Human protein_coding chr1:152484104 chr1:152484105 nonsynonymous SNV 0.150 1 22 hPsi_associated_SNPs_21436 0 0 0 0 0 exosome 0.438718586725372 0.438710563543304 0.01836408 0 hPsi_site_15160 iPseU_CNN:0.01836408;iRNA_PseU:0 15161 chr9 125377193 125377193 1 + G A LAML 125377192 + 125377172 125377212 41 TCCACGCCTCCACATCCCCATGTACATCTTCCTCAGTAACT TCCACGCCTCCACATCCCCATATACATCTTCCTCAGTAACT < 41bp 0.516707266711259 0.870082215697724 0.24669978 0.64053255 prediction 0.70674989797293 Functional Gain - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377192 chr9:125377193 nonsynonymous SNV 0.925 4 22 hPsi_associated_SNPs_21437 0 0 0 0 0 unknown 0.449808926652142 0.447190717434538 0.2810651 0 hPsi_site_15161 iPseU_CNN:0.2810651;iRNA_PseU:0 15162 chr11 6891385 6891385 1 + G A rs2741764 6891384 + 6891364 6891404 41 ACTCGTGCCAAACTGGCTGCTGCCTCCTGGTTCCCAGGCTT ACTCGTGCCAAACTGGCTGCTACCTCCTGGTTCCCAGGCTT < 41bp 0.515747652244002 0.869122540425548 0.21862313 0.41619736 prediction 0.706749776363092 Functional Gain - OR10A2 ENSG00000170790 CDS Human protein_coding chr11:6891384 chr11:6891385 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_21438 0 0 0 0 0 unknown 0.438714741373132 0.438709076480555 0 0 hPsi_site_15162 iPseU_CNN:0;iRNA_PseU:0 15163 chr19 2339118 2339118 1 + G A rs185013202 2339117 + 2339097 2339137 41 GTATGCGCCTAAGGAGCCGGTGCTGGACTACAACATGGTCA GTATGCGCCTAAGGAGCCGGTACTGGACTACAACATGGTCA < 41bp 0.521211840371797 0.874582178906074 0.36411163 0.9598108 prediction 0.706740677068554 Functional Gain - SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2339117 chr19:2339118 . . 0 22 hPsi_associated_SNPs_21439 0 0 1 0 1 Endoplasmic reticulum 0.440623493554831 0.43871949822469 0.9196216 0 hPsi_site_15163 iPseU_CNN:0.9196216;iRNA_PseU:0 15164 chr19 55159668 55159668 1 + G A rs113607940 55159667 + 55159647 55159687 41 GGGTTTCCCTCAGCACCGCCTGTCTCCCCAGTGGCTTCCAG GGGTTTCCCTCAGCACCGCCTATCTCCCCAGTGGCTTCCAG < 41bp 0.517841853769867 0.87119726387893 0.25495228 0.45858994 prediction 0.706710820218125 Functional Gain - MIR8061;LILRB4 ENSG00000242856 ncRNA_exonic Human transcribed_processed_pseudogene chr19:55159667 chr19:55159668 . . 0 22 hPsi_associated_SNPs_21440 0 0 0 0 0 unknown 0.438718592999972 0.438718592995131 0 0 hPsi_site_15164 iPseU_CNN:0;iRNA_PseU:0 15165 chr22 38038924 38038924 1 + G A CESC 38038923 + 38038903 38038943 41 AAGGCCTTGGAGATGAGCTGTGCCATCCAGAATCAGCTGGC AAGGCCTTGGAGATGAGCTGTACCATCCAGAATCAGCTGGC < 41bp 0.451829972229905 0.85335425344007 0.5654763 0.825743 prediction 0.70670850688014 Functional Gain - SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38038923 chr22:38038924 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_21441 0 0 1 0 2 cytosol 0.432093198002877 0.437616143321316 0.5205334 0 hPsi_site_15165 iPseU_CNN:0.5205334;iRNA_PseU:0 15166 chr22 24837367 24837367 1 + G A SKCM 24837366 + 24837346 24837386 41 GAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCATGAGC GAACACGGGCCTCCCAGACGTAGAGCTCCTTAGCCATGAGC < 41bp 0.46578672408077 0.853352413699499 0.46734828 0.64850926 prediction 0.706704827398998 Functional Gain - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24837366 chr22:24837367 synonymous SNV . 0 22 hPsi_associated_SNPs_21442 0 0 1 0 0 Endoplasmic reticulum 0.438606212165976 0.438718592976757 0.29701852 0 hPsi_site_15166 iPseU_CNN:0.29701852;iRNA_PseU:0 15167 chr11 65414368 65414368 1 + G A rs75894763 65414367 + 65414347 65414387 41 GGCCGAGGCTCTGGTGCTGGTGGCGCCGCGCGACGGCCGCG GGCCGAGGCTCTGGTGCTGGTAGCGCCGCGCGACGGCCGCG < 41bp 0.468101162198444 0.853343182366281 0.19539857 0.684234 prediction 0.706686364732563 Functional Gain - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65414367 chr11:65414368 synonymous SNV . 0 22 hPsi_associated_SNPs_21443 0 0 1 0 0 Ribosome 0.438718592995102 0.438717195279842 0.368468 0 hPsi_site_15167 iPseU_CNN:0.368468;iRNA_PseU:0 15168 chr19 36207510 36207510 1 + G A rs1052491 36207509 + 36207489 36207529 41 CGGGGCCGGCTGTCCCAGCCTGGCCTCCATGCAGGCGCACA CGGGGCCGGCTGTCCCAGCCTAGCCTCCATGCAGGCGCACA < 41bp 0.48123345052249 0.853340534279904 0.26150233 0.4850487 prediction 0.706681068559808 Functional Gain - ZBTB32 ENSG00000011590 CDS Human protein_coding chr19:36207509 chr19:36207510 synonymous SNV . 0 22 hPsi_associated_SNPs_21444 0 0 0 0 0 nucleus 0.438728761899401 0.438713573565726 0 0 hPsi_site_15168 iPseU_CNN:0;iRNA_PseU:0 15169 chr5 453724 453724 1 + G A STAD 453723 + 453703 453743 41 CTGCAGAGGTCACTGGTCACTGTCCGCCGTGACCCCACCTT CTGCAGAGGTCACTGGTCACTATCCGCCGTGACCCCACCTT < 41bp 0.5327050752199 0.886031799007871 0.27624315 0.3262707 prediction 0.706653447575941 Functional Gain - EXOC3 ENSG00000180104 CDS Human protein_coding chr5:453723 chr5:453724 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_21445 0 0 1 0 0 Ribosome 0.438658491010451 0.439125001872461 0 0 hPsi_site_15169 iPseU_CNN:0;iRNA_PseU:0 15170 chr19 2291353 2291353 1 + C T COAD 2291354 - 2291334 2291374 41 CGAGAACAAGCTGGTAATCCTGCTGGACTACACTTTCCAGG CGAGAACAAGCTGGTAATCCTACTGGACTACACTTTCCAGG < 41bp 0.473270565537188 0.853326463726461 0.31296074 0.7641064 prediction 0.706652927452922 Functional Gain - LINGO3 ENSG00000220008 CDS Human protein_coding chr19:2291354 chr19:2291353 synonymous SNV . 0 22 hPsi_associated_SNPs_21446 0 0 0 0 0 exosome 0.438718592724048 0.438718593059348 0.5282128 0 hPsi_site_15170 iPseU_CNN:0.5282128;iRNA_PseU:0 15171 chr2 175287696 175287696 1 + G A READ 175287695 + 175287675 175287715 41 GAGGGAGAATTCCTGACCACTGCAAGCATGGTTTCTATTTT GAGGGAGAATTCCTGACCACTACAAGCATGGTTTCTATTTT < 41bp 0.470509077105118 0.853324674279595 0.28678456 0.33806998 prediction 0.706649348559189 Functional Gain - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175287695 chr2:175287696 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21447 0 0 0 0 2 exosome 0.438718697108293 0.438718597021145 0 0 hPsi_site_15171 iPseU_CNN:0;iRNA_PseU:0 15172 chr1 161140216 161140216 1 + G A PRAD 161140215 + 161140195 161140235 41 CCAGGGATTTGGACATTTGGTGCCATCTTCAGAAGATCCAG CCAGGGATTTGGACATTTGGTACCATCTTCAGAAGATCCAG < 41bp 0.532723534009714 0.886025507009135 0.2076464 0.43753606 prediction 0.706603945998842 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161140215 chr1:161140216 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21448 0 0 1 1 2 Cytosol 0.438718594582716 0.438718599458187 0 0 hPsi_site_15172 iPseU_CNN:0;iRNA_PseU:0 15173 chr11 20676275 20676275 1 + G A PRAD 20676274 + 20676254 20676294 41 TGCAGAGGCTGAAGTTGGTGTGCTCGCCACAGCCGGACTGG TGCAGAGGCTGAAGTTGGTGTACTCGCCACAGCCGGACTGG < 41bp 0.469361912055003 0.853288384099824 0.26923212 0.8972945 prediction 0.706576768199649 Functional Gain - SLC6A5 ENSG00000165970 CDS Human protein_coding chr11:20676274 chr11:20676275 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21449 0 0 0 0 1 unknown 0.438718503152007 0.438718608565866 0.794589 0 hPsi_site_15173 iPseU_CNN:0.794589;iRNA_PseU:0 15174 chr8 24192998 24192998 1 + G A SKCM 24192997 + 24192977 24193017 41 GTGTGCAGACCAGCAAAAGATGAGTGCGACCTGCCTGAAAT GTGTGCAGACCAGCAAAAGATAAGTGCGACCTGCCTGAAAT < 41bp 0.476246385845474 0.853284779417228 0.3056319 0.7553999 prediction 0.706569558834457 Functional Gain - ADAM28 ENSG00000042980 CDS Human protein_coding chr8:24192997 chr8:24192998 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21450 0 0 0 0 1 exosome 0.438786073996621 0.438704722925773 0.5107998 0 hPsi_site_15174 iPseU_CNN:0.5107998;iRNA_PseU:0 15175 chr17 73569591 73569591 1 + G A SKCM 73569590 + 73569570 73569610 41 CTGATCTCACCCTCGGAGTTTGAGCGCTTCTCTCTCTCCAC CTGATCTCACCCTCGGAGTTTAAGCGCTTCTCTCTCTCCAC < 41bp 0.45675241867546 0.853284535715356 0.2455408 0.31484592 prediction 0.706569071430711 Functional Gain - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73569590 chr17:73569591 nonsynonymous SNV 0.915 4 22 hPsi_associated_SNPs_21451 0 0 1 0 1 Endoplasmic reticulum 0.438718574684039 0.438718592980888 0 0 hPsi_site_15175 iPseU_CNN:0;iRNA_PseU:0 15176 chr5 64872729 64872729 1 + G A LUSC 64872728 + 64872708 64872748 41 GTTTACTGAACTGCAACAGATGAGGCAACAGTTACCAGACA GTTTACTGAACTGCAACAGATAAGGCAACAGTTACCAGACA < 41bp 0.526003434868016 0.879287780566713 0.23497856 0.2695472 prediction 0.706568691397394 Functional Gain - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64872728 chr5:64872729 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21452 0 0 1 0 1 chromatin 0.43871906578731 0.438703520149918 0 0 hPsi_site_15176 iPseU_CNN:0;iRNA_PseU:0 15177 chr1 201973567 201973567 1 + C A SKCM 201973566 + 201973546 201973586 41 GCTGCGATGGGGCCAAATCGTCCTTAAGAACGACCACCAGG GCTGCGATGGGGCCAAATCGTACTTAAGAACGACCACCAGG < 41bp 0.502448768588971 0.855731553521691 0.23799878 0.7940844 prediction 0.706565569865439 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201973566 chr1:201973567 synonymous SNV . 0 22 hPsi_associated_SNPs_21453 0 0 1 0 2 Ribosome 0.438718063000202 0.438715685878002 0.5881688 0 hPsi_site_15177 iPseU_CNN:0.5881688;iRNA_PseU:0 15178 chr22 32495173 32495173 1 + G A LUAD 32495172 + 32495152 32495192 41 TGGGGGCTTTAATTTCAGGTTGTTTATCCTGGTGCTGATTG TGGGGGCTTTAATTTCAGGTTATTTATCCTGGTGCTGATTG < 41bp 0.476873532932911 0.85327831222342 0.2400623 0.34375444 prediction 0.70655662444684 Functional Gain - SLC5A1 ENSG00000100170 CDS Human protein_coding chr22:32495172 chr22:32495173 synonymous SNV . 0 22 hPsi_associated_SNPs_21454 0 0 0 0 1 Nucleus 0.438718588186815 0.438718592086765 0 0 hPsi_site_15178 iPseU_CNN:0;iRNA_PseU:0 15179 chr19 10369315 10369315 1 + G A CESC 10369314 + 10369294 10369334 41 GGAGATGCCACAGAGCATCGTGGAGGCCACCTCTAGGCTTA GGAGATGCCACAGAGCATCGTAGAGGCCACCTCTAGGCTTA < 41bp 0.526872561116008 0.880143326373542 0.19086254 0.41158718 prediction 0.706541530515067 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10369314 chr19:10369315 synonymous SNV . 0 22 hPsi_associated_SNPs_21455 0 0 1 0 2 Cytosol 0.438708523150889 0.438718592398445 0 0 hPsi_site_15179 iPseU_CNN:0;iRNA_PseU:0 15180 chr1 229772905 229772905 1 + G A COAD 229772904 + 229772884 229772924 41 TTTGAAAAGGACCACATGGTTGTGGGTCATTGGGAAAACAG TTTGAAAAGGACCACATGGTTATGGGTCATTGGGAAAACAG < 41bp 0.493363090716568 0.853260694132413 0.30454928 0.55590284 prediction 0.706521388264826 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772904 chr1:229772905 nonsynonymous SNV 0.157 0 22 hPsi_associated_SNPs_21456 0 0 1 0 0 Nucleus 0.438721039765686 0.438757117653198 0.11180568 0 hPsi_site_15180 iPseU_CNN:0.11180568;iRNA_PseU:0 15181 chr2 207804356 207804356 1 + G A OV 207804355 + 207804335 207804375 41 GCTTGAAACCCTTTATCTTTTGGGGATGCTGGTTCCTGGAG GCTTGAAACCCTTTATCTTTTAGGGATGCTGGTTCCTGGAG < 41bp 0.511490137592118 0.864750793331655 0.39924413 0.39120904 prediction 0.706521311479074 Functional Gain - CPO ENSG00000144410 CDS Human protein_coding chr2:207804355 chr2:207804356 synonymous SNV . 0 22 hPsi_associated_SNPs_21457 0 0 1 0 1 exosome 0.438718700319726 0.438704851932514 0 0 hPsi_site_15181 iPseU_CNN:0;iRNA_PseU:0 15182 chr16 29820898 29820898 1 + G A SKCM 29820897 + 29820877 29820917 41 ATACCTGCGCATCCACGCGGTGAAGGACCACGGGCTCCAGG ATACCTGCGCATCCACGCGGTAAAGGACCACGGGCTCCAGG < 41bp 0.5286326262781 0.881892707060688 0.5475956 0.8895223 prediction 0.706520161565176 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820897 chr16:29820898 synonymous SNV . 0 22 hPsi_associated_SNPs_21458 0 0 1 0 1 Cytosol 0.438702768583291 0.438717928942301 0.6838534 0 hPsi_site_15182 iPseU_CNN:0.6838534;iRNA_PseU:0 15183 chr6 52269005 52269005 1 + G A COAD 52269004 + 52268984 52269024 41 CTCTCCTTCTTCTTCCTGGCTGCCTGCAGTGCTGCCACCGC CTCTCCTTCTTCTTCCTGGCTACCTGCAGTGCTGCCACCGC < 41bp 0.526696584721995 0.879950176461379 0.2168056 0.2865411 prediction 0.706507183478769 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52269004 chr6:52269005 nonsynonymous SNV 0.098 0 22 hPsi_associated_SNPs_21459 0 0 1 0 0 Ribosome 0.438716624703447 0.438718068338905 0 0 hPsi_site_15183 iPseU_CNN:0;iRNA_PseU:0 15184 chr2 128409308 128409308 1 + G A BLCA 128409307 + 128409287 128409327 41 GAAAACCAACGAGAGCTCGCTGAGTGCCAAGTCAGAGCTGT GAAAACCAACGAGAGCTCGCTAAGTGCCAAGTCAGAGCTGT < 41bp 0.472739791617147 0.853251878198546 0.32511473 0.8156577 prediction 0.706503756397092 Functional Gain - GPR17 ENSG00000144230 CDS Human protein_coding chr2:128409307 chr2:128409308 synonymous SNV . 0 22 hPsi_associated_SNPs_21460 0 0 0 0 0 Endoplasmic reticulum 0.43810145023162 0.438252584826385 0.6313154 0 hPsi_site_15184 iPseU_CNN:0.6313154;iRNA_PseU:0 15185 chr4 169099091 169099091 1 + G A GBM 169099090 + 169099070 169099110 41 GGGGGAGCACAAAACCATGCTGCAAATGATCCTGTGCAACA GGGGGAGCACAAAACCATGCTACAAATGATCCTGTGCAACA < 41bp 0.468362433756771 0.853247630247554 0.21169025 0.34304085 prediction 0.706495260495108 Functional Gain - ANXA10 ENSG00000109511 CDS Human protein_coding chr4:169099090 chr4:169099091 synonymous SNV . 0 22 hPsi_associated_SNPs_21461 0 0 0 0 2 exosome 0.438877466573649 0.435875814223427 0 0 hPsi_site_15185 iPseU_CNN:0;iRNA_PseU:0 15186 chr6 35436624 35436624 1 + G A rs376795337 35436623 + 35436603 35436643 41 CGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGC CGAGGCGGTGCGGGAAGTCCTACACGGGAACCAGCGCAAGC < 41bp 0.476940053504561 0.853243382736428 0.23027036 0.79342127 prediction 0.706486765472857 Functional Gain - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35436623 chr6:35436624 synonymous SNV . 0 22 hPsi_associated_SNPs_21462 0 0 1 0 1 Cytosol 0.438718624173538 0.438719550353456 0.58684254 0 hPsi_site_15186 iPseU_CNN:0.58684254;iRNA_PseU:0 15187 chr11 7586798 7586798 1 + G A rs200278198 7586797 + 7586777 7586817 41 ATTGCAGGCACTAAAACAGGTGCAGATCTTAGTGATGGTAC ATTGCAGGCACTAAAACAGGTACAGATCTTAGTGATGGTAC < 41bp 0.479030635705316 0.853238368550723 0.22841862 0.31985712 prediction 0.706476737101447 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7586797 chr11:7586798 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_21463 0 0 0 0 1 Cytosol 0.438718354470341 0.438718393267259 0 0 hPsi_site_15187 iPseU_CNN:0;iRNA_PseU:0 15188 chr5 176301048 176301048 1 + C A LUAD 176301047 + 176301027 176301067 41 CCTGGTCCTGCTGCTGCTTGTCCTCATCCTCGTTTATTGCC CCTGGTCCTGCTGCTGCTTGTACTCATCCTCGTTTATTGCC < 41bp 0.505840497033756 0.859077434647729 0.266599 0.6876392 prediction 0.706473875227944 Functional Gain - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176301047 chr5:176301048 synonymous SNV . 0 22 hPsi_associated_SNPs_21464 0 0 0 0 1 exosome 0.438720030654693 0.438784956606323 0.3752784 0 hPsi_site_15188 iPseU_CNN:0.3752784;iRNA_PseU:0 15189 chr20 1285771 1285771 1 + G A SKCM 1285770 + 1285750 1285790 41 GCTGCTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCA GCTGCTGCACAGCATGGAGGTAGCCCAGAATGGCATGGCCA < 41bp 0.460781654569374 0.853235845337203 0.20223379 0.4569982 prediction 0.706471690674406 Functional Gain - SNPH ENSG00000101298 CDS Human protein_coding chr20:1285770 chr20:1285771 synonymous SNV . 0 22 hPsi_associated_SNPs_21465 0 0 0 0 0 Endoplasmic reticulum 0.438718593000444 0.438730536514042 0 0 hPsi_site_15189 iPseU_CNN:0;iRNA_PseU:0 15190 chr19 45411811 45411811 1 + G A BLCA 45411810 + 45411790 45411830 41 GGCGCTGATGGACGAGACCATGAAGGAGTTGAAGGCCTACA GGCGCTGATGGACGAGACCATAAAGGAGTTGAAGGCCTACA < 41bp 0.475545772104744 0.85322381903784 0.31251147 0.3957218 prediction 0.70644763807568 Functional Gain - APOE ENSG00000130203 CDS Human protein_coding chr19:45411810 chr19:45411811 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_21466 0 0 1 0 1 Cytosol 0.438772678198987 0.438696733708486 0 0 hPsi_site_15190 iPseU_CNN:0;iRNA_PseU:0 15191 chr1 13718549 13718549 1 + G A rs35947245 13718548 + 13718528 13718568 41 CTAATGTGGACCACCAATCTTGAGCCCCTTGGAGCTCTGCT CTAATGTGGACCACCAATCTTAAGCCCCTTGGAGCTCTGCT < 41bp 0.473515513043137 0.853217070435516 0.34304655 0.397093 prediction 0.706434140871033 Functional Gain - PRAMEF17 ENSG00000204479 CDS Human protein_coding chr1:13718548 chr1:13718549 nonsynonymous SNV 0.011 2 22 hPsi_associated_SNPs_21467 0 0 0 0 0 unknown 0.436535678377364 0.438713755819806 0 0 hPsi_site_15191 iPseU_CNN:0;iRNA_PseU:0 15192 chr11 5444294 5444294 1 + G A SKCM 5444293 + 5444273 5444313 41 CTACCTGCTGGCACCCCCGGTGATGAACCCCATCATTTACA CTACCTGCTGGCACCCCCGGTAATGAACCCCATCATTTACA < 41bp 0.491168096787598 0.853206470514835 0.12996688 0.5352136 prediction 0.70641294102967 Functional Gain - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5444293 chr11:5444294 synonymous SNV . 0 22 hPsi_associated_SNPs_21468 0 0 0 0 0 chromatin 0.438718592919108 0.438718592995043 0.0704271999999999 0 hPsi_site_15192 iPseU_CNN:0.0704271999999999;iRNA_PseU:0 15193 chr17 76395526 76395526 1 + G A SKCM 76395525 + 76395505 76395545 41 CACGCCGCACCTCCGTGGGCTGCTTCGGCTCCTCATCCCTG CACGCCGCACCTCCGTGGGCTACTTCGGCTCCTCATCCCTG < 41bp 0.528890355682471 0.88209600287909 0.43711454 0.65560615 prediction 0.706411294393238 Functional Gain - PGS1 ENSG00000087157 CDS Human protein_coding chr17:76395525 chr17:76395526 synonymous SNV . 0 22 hPsi_associated_SNPs_21469 0 0 1 0 1 chromatin 0.438718593046243 0.43871801272427 0.3112123 0 hPsi_site_15193 iPseU_CNN:0.3112123;iRNA_PseU:0 15194 chr14 19377694 19377694 1 + G A UCEC 19377693 + 19377673 19377713 41 TTATACTCCAAGGTTTCACTTGTGAGTGGACAATTCAGATC TTATACTCCAAGGTTTCACTTATGAGTGGACAATTCAGATC < 41bp 0.500531368564042 0.85373469666935 0.27861455 0.34379435 prediction 0.706406656210614 Functional Gain - OR11H12 ENSG00000257115 CDS Human protein_coding chr14:19377693 chr14:19377694 nonsynonymous SNV 0.163 0 22 hPsi_associated_SNPs_21470 0 0 0 0 0 unknown 0.438718198817572 0.438717531109494 0 0 hPsi_site_15194 iPseU_CNN:0;iRNA_PseU:0 15195 chr16 89628037 89628037 1 + C A COAD 89628036 + 89628016 89628056 41 ACCATCGGCATTTCTGTGGATCCGAGGAGGCGGAACAAGTC ACCATCGGCATTTCTGTGGATACGAGGAGGCGGAACAAGTC < 41bp 0.498034059902678 0.85320191383758 0.27785426 0.7322904 prediction 0.70640382767516 Functional Gain - RPL13 ENSG00000167526 CDS Human protein_coding chr16:89628036 chr16:89628037 nonsynonymous SNV 0.076 0 22 hPsi_associated_SNPs_21471 0 0 1 0 2 Cytosol 0.438718614176609 0.438718710854628 0.4645808 0 hPsi_site_15195 iPseU_CNN:0.4645808;iRNA_PseU:0 15196 chr8 42403913 42403913 1 + G A LUSC 42403912 + 42403892 42403932 41 TTTAAGACAACAACTGGAAATGTATTCCATTTGTAAGTATA TTTAAGACAACAACTGGAAATATATTCCATTTGTAAGTATA < 41bp 0.48317897508803 0.853183265314465 0.29920638 0.32391167 prediction 0.70636653062893 Functional Gain - SMIM19 ENSG00000176209 CDS Human protein_coding chr8:42403912 chr8:42403913 nonsynonymous SNV 0.854 2 22 hPsi_associated_SNPs_21472 0 0 1 0 1 Ribosome 0.438668994871256 0.438719162904615 0 0 hPsi_site_15196 iPseU_CNN:0;iRNA_PseU:0 15197 chr11 71850461 71850461 1 + G A HNSC 71850460 + 71850440 71850480 41 AAGAGGACTGTGAGCGCTGGTGGGAGGACTGTCGCACCTCC AAGAGGACTGTGAGCGCTGGTAGGAGGACTGTCGCACCTCC < 41bp 0.534811218585554 0.887978569478431 0.22737122 0.34919465 prediction 0.706334701785755 Functional Gain - FOLR3 ENSG00000110203 CDS Human protein_coding chr11:71850460 chr11:71850461 stopgain 0.755 0 22 hPsi_associated_SNPs_21473 0 0 0 0 2 Endoplasmic reticulum 0.438709582955259 0.438718592995096 0 0 hPsi_site_15197 iPseU_CNN:0;iRNA_PseU:0 15198 chr14 21058829 21058829 1 + C T CESC 21058830 - 21058810 21058850 41 TCTGTTCTGGGAAAATGAGGTGAATGATGAAGCAGTGATGT TCTGTTCTGGGAAAATGAGGTAAATGATGAAGCAGTGATGT < 41bp 0.494649999432741 0.853162971229153 0.24660972 0.65339303 prediction 0.706325942458306 Functional Gain - RNASE12 ENSG00000258436;ENSG00000259060 CDS Human other chr14:21058830 chr14:21058829 synonymous SNV . 0 22 hPsi_associated_SNPs_21474 0 0 0 0 0 unknown 0.439205987593514 0.438675315604088 0.30678606 0 hPsi_site_15198 iPseU_CNN:0.30678606;iRNA_PseU:0 15199 chr18 12277158 12277158 1 + G A HNSC 12277157 + 12277137 12277177 41 CCTGTCCTACTCCGCCCAGGTGACGGGACAGTTTCTCATCT CCTGTCCTACTCCGCCCAGGTAACGGGACAGTTTCTCATCT < 41bp 0.520730473176486 0.873891333609338 0.2523253 0.58068 prediction 0.706321720865704 Functional Gain - CIDEA ENSG00000176194 CDS Human protein_coding chr18:12277157 chr18:12277158 synonymous SNV . 0 22 hPsi_associated_SNPs_21475 0 0 0 0 1 unknown 0.43875191678373 0.438718592637222 0.16136 0 hPsi_site_15199 iPseU_CNN:0.16136;iRNA_PseU:0 15200 chr6 43623347 43623347 1 + G A UCEC 43623346 + 43623326 43623366 41 GTGTCTGTCATTGACCAGATTGACAAGGCTGTGGCCATCAT GTGTCTGTCATTGACCAGATTAACAAGGCTGTGGCCATCAT < 41bp 0.46362783171772 0.853158288738668 0.33745235 0.5763417 prediction 0.706316577477335 Functional Gain - RSPH9 ENSG00000172426 CDS Human protein_coding chr6:43623346 chr6:43623347 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21476 0 0 0 0 3 chromatin 0.438678599648397 0.42919280417821 0.1526834 0 hPsi_site_15200 iPseU_CNN:0.1526834;iRNA_PseU:0 15201 chrX 51638592 51638592 1 + C A UCEC 51638591 + 51638571 51638611 41 CCCAAATGCCACCTACAATTTCTCTCAGTCTCTCAATGCCA CCCAAATGCCACCTACAATTTATCTCAGTCTCTCAATGCCA < 41bp 0.493296520133254 0.853150847749302 0.43583333 0.62610275 prediction 0.706301695498603 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638591 chrX:51638592 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21477 0 0 1 0 0 chromatin 0.439078159248358 0.438731728929916 0.2522055 0 hPsi_site_15201 iPseU_CNN:0.2522055;iRNA_PseU:0 15202 chr9 139700619 139700619 1 + G A CESC 139700618 + 139700598 139700638 41 TGAGGAGTGGCGGGTGCAGCTGAAGGCCCTGGTGAAGCAGC TGAGGAGTGGCGGGTGCAGCTAAAGGCCCTGGTGAAGCAGC < 41bp 0.533069297392248 0.886219510764485 0.31575048 0.32696593 prediction 0.706300426744476 Functional Gain - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139700618 chr9:139700619 synonymous SNV . 0 22 hPsi_associated_SNPs_21478 0 0 1 0 2 chromatin 0.438768395186224 0.438718591659035 0 0 hPsi_site_15202 iPseU_CNN:0;iRNA_PseU:0 15203 chr10 43597827 43597827 1 + C A rs1800859 43597826 + 43597806 43597846 41 GCTCACCGTCTACCTCAAGGTCTTCCTGTCACCCACATCCC GCTCACCGTCTACCTCAAGGTATTCCTGTCACCCACATCCC < 41bp 0.507459102879783 0.860605387844447 0.6738252 0.87586 prediction 0.706292569929327 Functional Gain - RET ENSG00000165731 CDS Human protein_coding chr10:43597826 chr10:43597827 synonymous SNV . 0 22 hPsi_associated_SNPs_21479 7 0 0 0 1 Cytosol 0.438718582101099 0.438691321519548 0.4040696 0 hPsi_site_15203 iPseU_CNN:0.4040696;iRNA_PseU:0 15204 chr12 111885276 111885276 1 + G A KIRP 111885275 + 111885255 111885295 41 GGGCCCTGATGCTCATGGAGTGTTCCTGGTGCGGCAGAGCG GGGCCCTGATGCTCATGGAGTATTCCTGGTGCGGCAGAGCG < 41bp 0.449666235530967 0.853137153563208 0.32225347 0.6725071 prediction 0.706274307126416 Functional Gain - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111885275 chr12:111885276 synonymous SNV . 0 22 hPsi_associated_SNPs_21480 0 0 1 0 1 Ribosome 0.438717401035185 0.43871836159078 0.3450142 0 hPsi_site_15204 iPseU_CNN:0.3450142;iRNA_PseU:0 15205 chrX 118374364 118374364 1 + G A BLCA 118374363 + 118374343 118374383 41 GCACTGAAGGATGAGTACGATGACCTTTCTGACCTCACTGC GCACTGAAGGATGAGTACGATAACCTTTCTGACCTCACTGC < 41bp 0.462145387626206 0.853131065243962 0.42786086 0.73844683 prediction 0.706262130487924 Functional Gain - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118374363 chrX:118374364 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_21481 0 0 1 0 2 Ribosome 0.438718473607068 0.438767589181241 0.47689366 0 hPsi_site_15205 iPseU_CNN:0.47689366;iRNA_PseU:0 15206 chr14 20389012 20389012 1 + G A COAD 20389011 + 20388991 20389031 41 TTTGCTACCCCTAAAATGATTGCAGATTTTCTGAGTGCACA TTTGCTACCCCTAAAATGATTACAGATTTTCTGAGTGCACA < 41bp 0.497831636172547 0.853128130108351 0.26138455 0.3876577 prediction 0.706256260216701 Functional Gain - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20389011 chr14:20389012 nonsynonymous SNV 0.918 0 22 hPsi_associated_SNPs_21482 0 0 0 0 0 unknown 0.438637409618295 0.438717079195025 0 0 hPsi_site_15206 iPseU_CNN:0;iRNA_PseU:0 15207 chr20 44506707 44506707 1 + G A SKCM 44506706 + 44506686 44506726 41 ACCTTGCACCAGAGTGGCTCTGAACTAGCCTACAAGCTGTG ACCTTGCACCAGAGTGGCTCTAAACTAGCCTACAAGCTGTG < 41bp 0.459714566479106 0.853120490047299 0.221326 0.36504233 prediction 0.706240980094599 Functional Gain - ZSWIM3 ENSG00000132801 CDS Human protein_coding chr20:44506706 chr20:44506707 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_21483 0 0 0 0 0 Cytosol 0.43430157559693 0.438384050229318 0 0 hPsi_site_15207 iPseU_CNN:0;iRNA_PseU:0 15208 chr6 132891930 132891930 1 + G A SKCM 132891929 + 132891909 132891949 41 GAATTTGCATCAGCGTGTCCTGGATCCTGCCCCTCATGTAC GAATTTGCATCAGCGTGTCCTAGATCCTGCCCCTCATGTAC < 41bp 0.479195157620328 0.853108096754532 0.20162854 0.4077971 prediction 0.706216193509064 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891929 chr6:132891930 stopgain 0.018 1 22 hPsi_associated_SNPs_21484 0 0 0 0 0 unknown 0.438639669655087 0.439046906687027 0 0 hPsi_site_15208 iPseU_CNN:0;iRNA_PseU:0 15209 chr3 179301218 179301218 1 + G A COAD 179301217 + 179301197 179301237 41 TGACAGGTTGAATAGAGAGCTGTCTCAGAAAACTCCTCCAG TGACAGGTTGAATAGAGAGCTATCTCAGAAAACTCCTCCAG < 41bp 0.528013378975647 0.8811148953251 0.6889844 0.80089664 prediction 0.706203032698906 Functional Gain - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179301217 chr3:179301218 synonymous SNV . 0 22 hPsi_associated_SNPs_21485 0 0 1 0 1 Ribosome 0.438791434423636 0.438788182842589 0.22382448 0 hPsi_site_15209 iPseU_CNN:0.22382448;iRNA_PseU:0 15210 chr1 109777877 109777877 1 + G A BLCA 109777876 + 109777856 109777896 41 TCTGATGACAACTCCTATGATGAGAAGTACCTGATTGCCAC TCTGATGACAACTCCTATGATAAGAAGTACCTGATTGCCAC < 41bp 0.509642687049351 0.862744176255591 0.2614669 0.3321971 prediction 0.706202978412481 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109777876 chr1:109777877 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_21486 0 0 1 0 1 Ribosome 0.438732458497021 0.438132582189737 0 0 hPsi_site_15210 iPseU_CNN:0;iRNA_PseU:0 15211 chr11 57983081 57983081 1 + G A UCEC 57983080 + 57983060 57983100 41 GACACTGATAAGATTGGTGCTGTCCTATTCACTGTGGTGAC GACACTGATAAGATTGGTGCTATCCTATTCACTGTGGTGAC < 41bp 0.506739998513078 0.859838818363803 0.30463326 0.5935669 prediction 0.706197639701452 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57983080 chr11:57983081 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_21487 0 0 0 0 0 unknown 0.43872943529808 0.438725634089921 0.1871338 0 hPsi_site_15211 iPseU_CNN:0.1871338;iRNA_PseU:0 15212 chr9 125424618 125424618 1 + G A SKCM 125424617 + 125424597 125424637 41 AGAAGGCTTGGCTGTCATAATGACCCCGTTTTCATGCATCA AGAAGGCTTGGCTGTCATAATAACCCCGTTTTCATGCATCA < 41bp 0.503480782810102 0.856577613283082 0.07705927 0.18053988 prediction 0.70619366094596 Functional Gain - OR1L1 ENSG00000173679 CDS Human protein_coding chr9:125424617 chr9:125424618 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_21488 0 0 0 0 0 unknown 0.43871072718248 0.438711618323883 0 0 hPsi_site_15212 iPseU_CNN:0;iRNA_PseU:0 15213 chr9 125486868 125486868 1 + G A BLCA 125486867 + 125486847 125486887 41 ATCCTCCAGCCAGATGGTGGTGATGACTGAGACCTTAGCTG ATCCTCCAGCCAGATGGTGGTAATGACTGAGACCTTAGCTG < 41bp 0.519747933442627 0.872832986699831 0.25905493 0.55443823 prediction 0.706170106514407 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125486867 chr9:125486868 synonymous SNV . 0 22 hPsi_associated_SNPs_21489 0 0 0 0 0 unknown 0.438468245484491 0.438657181427165 0.10887646 0 hPsi_site_15213 iPseU_CNN:0.10887646;iRNA_PseU:0 15214 chr9 134379608 134379608 1 + G A LUSC 134379607 + 134379587 134379627 41 GAGCCCGCTTTTCTACAAGATGTGGGGATTTTTGAAGCGCC GAGCCCGCTTTTCTACAAGATATGGGGATTTTTGAAGCGCC < 41bp 0.471760509409735 0.853083211854534 0.22866613 0.415874 prediction 0.706166423709068 Functional Gain - POMT1 ENSG00000130714 CDS Human protein_coding chr9:134379607 chr9:134379608 nonsynonymous SNV 0.935 3 22 hPsi_associated_SNPs_21490 0 0 1 0 1 Endoplasmic reticulum 0.438718592994825 0.438718592996069 0 0 hPsi_site_15214 iPseU_CNN:0;iRNA_PseU:0 15215 chr16 77910297 77910297 1 + G A SKCM 77910296 + 77910276 77910316 41 TGAAGGTGTGGACATCGTTTTGGATTGCCTCTGTGGGGACA TGAAGGTGTGGACATCGTTTTAGATTGCCTCTGTGGGGACA < 41bp 0.465897717073845 0.853074785712188 0.3280475 0.71539485 prediction 0.706149571424377 Functional Gain - VAT1L ENSG00000171724 CDS Human protein_coding chr16:77910296 chr16:77910297 synonymous SNV . 0 22 hPsi_associated_SNPs_21491 0 0 0 0 2 Endoplasmic reticulum 0.43866066946934 0.438684958538078 0.4307897 0 hPsi_site_15215 iPseU_CNN:0.4307897;iRNA_PseU:0 15216 chr7 31013662 31013662 1 + G A rs145466944 31013661 + 31013641 31013681 41 CATGACCAACTTCAGCTGGCTGTTGGCAGAAGCCGTCTACC CATGACCAACTTCAGCTGGCTATTGGCAGAAGCCGTCTACC < 41bp 0.45829375125491 0.853074291332163 0.25153846 0.33518994 prediction 0.706148582664326 Functional Gain - GHRHR ENSG00000106128 CDS Human protein_coding chr7:31013661 chr7:31013662 synonymous SNV 0.998 0 22 hPsi_associated_SNPs_21492 0 0 0 0 2 unknown 0.436338583397943 0.439668021353769 0 0 hPsi_site_15216 iPseU_CNN:0;iRNA_PseU:0 15217 chr6 74104733 74104733 1 + G A HNSC 74104732 + 74104712 74104752 41 GAGGAGGCCGGCGGAGGAGTTGAATCGAACAGGTCCTGAGG GAGGAGGCCGGCGGAGGAGTTAAATCGAACAGGTCCTGAGG < 41bp 0.47664099983907 0.853068830837218 0.5437031 0.7065543 prediction 0.706137661674436 Functional Gain - DDX43 ENSG00000080007 CDS Human protein_coding chr6:74104732 chr6:74104733 synonymous SNV . 0 22 hPsi_associated_SNPs_21493 0 0 0 0 0 exosome 0.438718602435502 0.43871859299498 0.3257024 0 hPsi_site_15217 iPseU_CNN:0.3257024;iRNA_PseU:0 15218 chr12 121164962 121164962 1 + G A PRAD 121164961 + 121164941 121164981 41 GTTTCCCATTGCAGCCCAGGTGGATAAGGAACATCTCTTCC GTTTCCCATTGCAGCCCAGGTAGATAAGGAACATCTCTTCC < 41bp 0.532229333803866 0.885297939025211 0.33623564 0.6160759 prediction 0.70613721044269 Functional Gain - ACADS ENSG00000122971 CDS Human protein_coding chr12:121164961 chr12:121164962 synonymous SNV . 0 22 hPsi_associated_SNPs_21494 0 0 1 0 1 Cytosol 0.438718592995023 0.438717609646224 0.2321518 0 hPsi_site_15218 iPseU_CNN:0.2321518;iRNA_PseU:0 15219 chr2 48023116 48023116 1 + G A READ 48023115 + 48023095 48023135 41 AGAGCAATGCAACGTGCAGATGAAGCCTTAAATAAAGACAA AGAGCAATGCAACGTGCAGATAAAGCCTTAAATAAAGACAA < 41bp 0.476248249571102 0.853056771459701 0.28485435 0.64240885 prediction 0.706113542919402 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48023115 chr2:48023116 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_21495 0 0 1 0 2 Nucleus 0.438718586502012 0.438718600612277 0.2848177 0 hPsi_site_15219 iPseU_CNN:0.2848177;iRNA_PseU:0 15220 chr18 72226605 72226605 1 + G A UCEC 72226604 + 72226584 72226624 41 GAGCGACTCTGTCCAGCCTGTGCCTCGCTTCAGACAAGAGC GAGCGACTCTGTCCAGCCTGTACCTCGCTTCAGACAAGAGC < 41bp 0.449192248453585 0.853045259395829 0.36744457 0.9305314 prediction 0.706090518791659 Functional Gain - CNDP1 ENSG00000150656 CDS Human protein_coding chr18:72226604 chr18:72226605 synonymous SNV . 0 22 hPsi_associated_SNPs_21496 0 0 0 0 1 exosome 0.438718602745267 0.438715073045224 0.8610628 0 hPsi_site_15220 iPseU_CNN:0.8610628;iRNA_PseU:0 15221 chr17 72937706 72937706 1 + G A rs144327369 72937705 + 72937685 72937725 41 TCGGGGCTCCTGGCCCTGAATGTGGTGTTCCTGGGTGGCGC TCGGGGCTCCTGGCCCTGAATATGGTGTTCCTGGGTGGCGC < 41bp 0.461528171414248 0.85303973508991 0.63957834 0.6844015 prediction 0.706079470179821 Functional Gain - OTOP3 ENSG00000182938 CDS Human protein_coding chr17:72937705 chr17:72937706 nonsynonymous SNV 0.966 4 22 hPsi_associated_SNPs_21497 0 0 0 0 0 unknown 0.438718608839506 0.43871859500467 0.0896463199999999 0 hPsi_site_15221 iPseU_CNN:0.0896463199999999;iRNA_PseU:0 15222 chr7 150389761 150389761 1 + G A HNSC 150389760 + 150389740 150389780 41 CCAGCAGGCTGCACAGAGGGTGAAGGAGATCTTTGGAGAGG CCAGCAGGCTGCACAGAGGGTAAAGGAGATCTTTGGAGAGG < 41bp 0.464809974610536 0.853021391730701 0.3547572 0.6760418 prediction 0.706042783461401 Functional Gain - GIMAP2 ENSG00000106560 CDS Human protein_coding chr7:150389760 chr7:150389761 synonymous SNV . 0 22 hPsi_associated_SNPs_21498 0 0 0 0 0 exosome 0.438719853700223 0.438718173653131 0.3520836 0 hPsi_site_15222 iPseU_CNN:0.3520836;iRNA_PseU:0 15223 chr1 233807068 233807068 1 + G A rs34957762 233807067 + 233807047 233807087 41 TGGTAGTTCTGGAAACCTTCTGTGAACTCCATGAGCTGAAA TGGTAGTTCTGGAAACCTTCTATGAACTCCATGAGCTGAAA < 41bp 0.511029330667776 0.86404673929372 0.26937908 0.3293634 prediction 0.706034817251888 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807067 chr1:233807068 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21499 0 0 1 0 1 Endoplasmic reticulum 0.438365597507209 0.437021092557966 0 0 hPsi_site_15223 iPseU_CNN:0;iRNA_PseU:0 15224 chr1 150236252 150236252 1 + G A rs192272188 150236251 + 150236231 150236271 41 TGTCTCTGCCTTCTCCTGGCTGTTTATTTCATTGCTAGAAA TGTCTCTGCCTTCTCCTGGCTATTTATTTCATTGCTAGAAA < 41bp 0.468397979317192 0.853003475284458 0.29130292 0.32719034 prediction 0.706006950568916 Functional Gain - CA14 ENSG00000118298 CDS Human protein_coding chr1:150236251 chr1:150236252 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_21500 0 0 0 0 2 exosome 0.438718635137879 0.438718637018375 0 0 hPsi_site_15224 iPseU_CNN:0;iRNA_PseU:0 15225 chr7 100610312 100610312 1 + G A UCEC 100610311 + 100610291 100610331 41 CGAGATGACCTCGTCCTCAGTGTGAGCCCTGCGGGGCCCCT CGAGATGACCTCGTCCTCAGTATGAGCCCTGCGGGGCCCCT < 41bp 0.508189555330729 0.861190587181873 0.42947125 0.7046534 prediction 0.706002063702288 Functional Gain - MUC3A ENSG00000169894 CDS Human protein_coding chr7:100610311 chr7:100610312 synonymous SNV . 0 22 hPsi_associated_SNPs_21501 0 0 0 0 1 exosome 0.43871922684255 0.438726278259451 0.4093068 0 hPsi_site_15225 iPseU_CNN:0.4093068;iRNA_PseU:0 15226 chrX 34961511 34961511 1 + G A UCEC 34961510 + 34961490 34961530 41 AATATCCCTGTGGGGAATCCTGCCCGCGGCCTCCCGAGACT AATATCCCTGTGGGGAATCCTACCCGCGGCCTCCCGAGACT < 41bp 0.466988402363493 0.852998946349463 0.19382474 0.29281786 prediction 0.705997892698926 Functional Gain - FAM47B ENSG00000189132 CDS Human protein_coding chrX:34961510 chrX:34961511 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_21502 0 0 0 0 0 unknown 0.438708229139993 0.43871895518176 0 0 hPsi_site_15226 iPseU_CNN:0;iRNA_PseU:0 15227 chr22 50921411 50921411 1 + G A GBM 50921410 + 50921390 50921430 41 AGCTGCAGCTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGC AGCTGCAGCTGAGCCCCATCTAAAGCCCAGTCCCTCGGAGC < 41bp 0.518364273284537 0.871349331550336 0.34884784 0.7225559 prediction 0.705970116531597 Functional Gain - ADM2 ENSG00000128165 CDS Human protein_coding chr22:50921410 chr22:50921411 synonymous SNV . 0 22 hPsi_associated_SNPs_21503 0 0 1 0 0 nucleolus 0.438718521871511 0.438718515968408 0.4451118 0 hPsi_site_15227 iPseU_CNN:0.4451118;iRNA_PseU:0 15228 chr6 33383636 33383636 1 + G A LUAD 33383635 + 33383615 33383655 41 CCCACAGACATCCCTAAAAGTGCCCCCCACTCGATGACTGC CCCACAGACATCCCTAAAAGTACCCCCCACTCGATGACTGC < 41bp 0.464361016882861 0.852976204315062 0.1978463 0.6150601 prediction 0.705952408630124 Functional Gain - PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383635 chr6:33383636 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_21504 0 0 1 0 1 Cytosol 0.438718592995102 0.4387185929951 0.2301202 0 hPsi_site_15228 iPseU_CNN:0.2301202;iRNA_PseU:0 15229 chr17 7452584 7452584 1 + G A ESCA 7452583 + 7452563 7452603 41 GCTGGCCTGCCTCGGCCTCCTGCTGGCCGTGGTCAGTTTGG GCTGGCCTGCCTCGGCCTCCTACTGGCCGTGGTCAGTTTGG < 41bp 0.49703570355984 0.852959923987522 0.27481884 0.5254117 prediction 0.705919847975044 Functional Gain - TNFSF12;TNFSF12-TNFSF13 ENSG00000239697;ENSG00000248871 CDS Human other chr17:7452583 chr17:7452584 synonymous SNV . 0 22 hPsi_associated_SNPs_21505 0 0 1 1 1 unknown 0.438720234466357 0.438720445815706 0.0508234000000001 0 hPsi_site_15229 iPseU_CNN:0.0508234000000001;iRNA_PseU:0 15230 chr1 26607295 26607295 1 + G A SKCM 26607294 + 26607274 26607314 41 GAGGTGACCCGAATCCTGGATGGGAAGCGCATCCAATACCA GAGGTGACCCGAATCCTGGATAGGAAGCGCATCCAATACCA < 41bp 0.531881474329305 0.88484121902066 0.22958699 0.35114157 prediction 0.705919489382709 Functional Gain - SH3BGRL3 ENSG00000142669 CDS Human protein_coding chr1:26607294 chr1:26607295 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21506 0 0 1 0 1 Ribosome 0.438737005953012 0.437871697978035 0 0 hPsi_site_15230 iPseU_CNN:0;iRNA_PseU:0 15231 chr19 15197966 15197966 1 + G A LUSC 15197965 + 15197945 15197985 41 TCAGACCCTCCTCTTCACAATGTTCCTCTCCACATACCTGG TCAGACCCTCCTCTTCACAATATTCCTCTCCACATACCTGG < 41bp 0.488324884671996 0.852956622077303 0.28637886 0.39972606 prediction 0.705913244154605 Functional Gain - OR1I1 ENSG00000094661 CDS Human protein_coding chr19:15197965 chr19:15197966 nonsynonymous SNV 0.020 0 22 hPsi_associated_SNPs_21507 0 0 0 0 0 unknown 0.435352724545165 0.435741668647064 0 0 hPsi_site_15231 iPseU_CNN:0;iRNA_PseU:0 15232 chr11 199402 199402 1 + G A rs73386625 199401 + 199381 199421 41 GCAGCCTACCGCCAAACTGATGTGCGGGTGACCAAGTTCAA GCAGCCTACCGCCAAACTGATATGCGGGTGACCAAGTTCAA < 41bp 0.493476450166116 0.852951485295926 0.28907216 0.40694517 prediction 0.705902970591853 Functional Gain - ODF3 ENSG00000177947 CDS Human protein_coding chr11:199401 chr11:199402 nonsynonymous SNV 0.466 0 22 hPsi_associated_SNPs_21508 0 0 0 2 1 exosome 0.438718592904243 0.438718566336653 0 0 hPsi_site_15232 iPseU_CNN:0;iRNA_PseU:0 15233 chrX 12809661 12809661 1 + G A rs1731469 12809660 + 12809640 12809680 41 CGGCAGCTCGCATCAGGACCTGTCCCAGCGCGTGGCCGACC CGGCAGCTCGCATCAGGACCTATCCCAGCGCGTGGCCGACC < 41bp 0.476691334834953 0.852949011767393 0.5134761 0.8175045 prediction 0.705898023534786 Functional Gain - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12809660 chrX:12809661 synonymous SNV . 0 22 hPsi_associated_SNPs_21509 0 0 1 0 1 Ribosome 0.438712753395881 0.438687488084412 0.6080568 0 hPsi_site_15233 iPseU_CNN:0.6080568;iRNA_PseU:0 15234 chr2 219563642 219563642 1 + G A UCEC 219563641 + 219563621 219563661 41 GGGCCACCCAGAGAATTCTGTGCGGGCACACACTTATAGGC GGGCCACCCAGAGAATTCTGTACGGGCACACACTTATAGGC < 41bp 0.448886612659088 0.852936466300006 0.3404829 0.81430864 prediction 0.705872932600012 Functional Gain - STK36 ENSG00000163482 CDS Human protein_coding chr2:219563641 chr2:219563642 synonymous SNV . 0 22 hPsi_associated_SNPs_21510 0 0 0 0 0 chromatin 0.438758470831824 0.432306262018418 0.62861728 0 hPsi_site_15234 iPseU_CNN:0.62861728;iRNA_PseU:0 15235 chr11 70281823 70281823 1 + G A SARC 70281822 + 70281802 70281842 41 TCAGATGGGAAATCTGCCTATGTCATACCGTGACAGCCCGC TCAGATGGGAAATCTGCCTATATCATACCGTGACAGCCCGC < 41bp 0.475966019970146 0.8529362876693 0.4883581 0.72604346 prediction 0.7058725753386 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281822 chr11:70281823 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_21511 0 0 1 0 1 Ribosome 0.438718582906598 0.438718593004125 0.45208692 0 hPsi_site_15235 iPseU_CNN:0.45208692;iRNA_PseU:0 15236 chr17 29325726 29325726 1 + G A BLCA 29325725 + 29325705 29325745 41 GAAGAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCC GAAGAGCCTTTCCTGCAGCCTAGAGGTGTCCAAGGATTCCC < 41bp 0.471179581669916 0.852934632449817 0.1841645 0.21895316 prediction 0.705869264899634 Functional Gain - RNF135 ENSG00000181481 CDS Human protein_coding chr17:29325725 chr17:29325726 synonymous SNV . 0 22 hPsi_associated_SNPs_21512 0 0 0 0 1 Ribosome 0.438675553138086 0.438718511974306 0 0 hPsi_site_15236 iPseU_CNN:0;iRNA_PseU:0 15237 chrX 54841170 54841170 1 + G A BRCA 54841169 + 54841149 54841189 41 TGGGGCCTGCGCTCTTACTATGAGACCAGCAAGATGAAAGT TGGGGCCTGCGCTCTTACTATAAGACCAGCAAGATGAAAGT < 41bp 0.459283792427295 0.852930536543111 0.30300677 0.30505943 prediction 0.705861073086222 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841169 chrX:54841170 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21513 0 0 1 0 2 chromatin 0.439393657843488 0.43866859805802 0 0 hPsi_site_15237 iPseU_CNN:0;iRNA_PseU:0 15238 chr2 79350024 79350024 1 + G A LUSC 79350023 + 79350003 79350043 41 TCCTACAAGTCCTGGGGCATTGGAGCCCCAAGCAGTGTTAA TCCTACAAGTCCTGGGGCATTAGAGCCCCAAGCAGTGTTAA < 41bp 0.460265406951692 0.852930474960917 0.21962267 0.29583848 prediction 0.705860949921834 Functional Gain - REG1A ENSG00000115386 CDS Human protein_coding chr2:79350023 chr2:79350024 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_21514 0 0 0 0 2 Ribosome 0.438718592995102 0.438718570676356 0 0 hPsi_site_15238 iPseU_CNN:0;iRNA_PseU:0 15239 chr17 1635658 1635658 1 + G A BLCA 1635657 + 1635637 1635677 41 GGCTCGGACCATCCTGTGTGTGAAAACCATCAGCCTCATCG GGCTCGGACCATCCTGTGTGTAAAAACCATCAGCCTCATCG < 41bp 0.454640708856132 0.852925067145349 0.4705793 0.7693073 prediction 0.705850134290698 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1635657 chr17:1635658 synonymous SNV . 0 22 hPsi_associated_SNPs_21515 0 0 1 0 1 Endoplasmic reticulum 0.438718685769159 0.438353669803054 0.5386146 0 hPsi_site_15239 iPseU_CNN:0.5386146;iRNA_PseU:0 15240 chr3 179294032 179294032 1 + G A BLCA 179294031 + 179294011 179294051 41 TAATGGTCGTTCTACTGGGCTGATTTTGGACAGTGGAGCCA TAATGGTCGTTCTACTGGGCTAATTTTGGACAGTGGAGCCA < 41bp 0.535439150370349 0.888357941392547 0.30603147 0.6380866 prediction 0.705837582044397 Functional Gain - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179294031 chr3:179294032 synonymous SNV . 0 22 hPsi_associated_SNPs_21516 0 0 1 0 2 Ribosome 0.438718198492924 0.4387158970049 0.2761732 0 hPsi_site_15240 iPseU_CNN:0.2761732;iRNA_PseU:0 15241 chr1 107691311 107691311 1 + G A BRCA 107691310 + 107691290 107691330 41 GGTTTGGGGACATTATGATTTGTGTAAGACTCAGATTTACA GGTTTGGGGACATTATGATTTATGTAAGACTCAGATTTACA < 41bp 0.507062988992054 0.859976853950924 0.45584878 0.63104194 prediction 0.70582772991774 Functional Gain - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107691310 chr1:107691311 synonymous SNV . 0 22 hPsi_associated_SNPs_21517 0 0 0 0 0 exosome 0.438461330085299 0.438714583582556 0.26208388 0 hPsi_site_15241 iPseU_CNN:0.26208388;iRNA_PseU:0 15242 chr22 24226520 24226520 1 + G A rs36026871 24226519 + 24226499 24226539 41 GGGGATCCTGGCCACAGAGCTGTTTGACCAGATGGCCAGGC GGGGATCCTGGCCACAGAGCTATTTGACCAGATGGCCAGGC < 41bp 0.448700944868853 0.852902848635732 0.60341126 0.6542903 prediction 0.705805697271463 Functional Gain - SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24226519 chr22:24226520 synonymous SNV . 0 22 hPsi_associated_SNPs_21518 0 0 1 0 2 nucleoplasm 0.438729051728839 0.439004806162494 0.10175808 0 hPsi_site_15242 iPseU_CNN:0.10175808;iRNA_PseU:0 15243 chr18 32834291 32834291 1 + C T UCEC 32834292 - 32834272 32834312 41 CAAAGCAAGAAATTGTTGAATGTGTAGCCTCAGCAGCTATG CAAAGCAAGAAATTGTTGAATATGTAGCCTCAGCAGCTATG < 41bp 0.477306445966228 0.852894477432654 0.24287671 0.27646506 prediction 0.705788954865308 Functional Gain - ZNF397;ZSCAN30 ENSG00000186812;ENSG00000186814 CDS Human other chr18:32834292 chr18:32834291 nonsynonymous SNV 0.962 0 22 hPsi_associated_SNPs_21519 0 0 1 0 1 unknown 0.438652232140866 0.438705349921323 0 0 hPsi_site_15243 iPseU_CNN:0;iRNA_PseU:0 15244 chr10 104230557 104230557 1 + G A rs201441188 104230556 + 104230536 104230576 41 AGCTGGCCTGCAGTTCTTGCTGTGCCTGTGCCTCTATGATG AGCTGGCCTGCAGTTCTTGCTATGCCTGTGCCTCTATGATG < 41bp 0.455799323054216 0.852890874563479 0.43230054 0.70820415 prediction 0.705781749126959 Functional Gain - MFSD13A ENSG00000138111 CDS Human protein_coding chr10:104230556 chr10:104230557 synonymous SNV . 0 22 hPsi_associated_SNPs_21520 0 0 1 0 0 Ribosome 0.438740692075608 0.438731494462973 0.4164083 0 hPsi_site_15244 iPseU_CNN:0.4164083;iRNA_PseU:0 15245 chr16 56504522 56504522 1 + G A LIHC 56504521 + 56504501 56504541 41 AGGCCTGAAGCTTCATTTCTTGGCCCCTTCGGAAGAAGATG AGGCCTGAAGCTTCATTTCTTAGCCCCTTCGGAAGAAGATG < 41bp 0.460308377376912 0.852890515474731 0.13441971 0.1814112 prediction 0.705781030949462 Functional Gain - OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56504521 chr16:56504522 synonymous SNV . 0 22 hPsi_associated_SNPs_21521 0 0 1 0 0 Ribosome 0.438718592995123 0.438810844220515 0 0 hPsi_site_15245 iPseU_CNN:0;iRNA_PseU:0 15246 chr1 36056276 36056276 1 + G A LUSC 36056275 + 36056255 36056295 41 CGAGACTTCGGTTACGTCTGTGAGACGGAGTTCCCAGCCAA CGAGACTTCGGTTACGTCTGTAAGACGGAGTTCCCAGCCAA < 41bp 0.527003066447636 0.879893270365806 0.7942928 0.91132957 prediction 0.705780407836341 Functional Gain - TFAP2E ENSG00000116819 CDS Human protein_coding chr1:36056275 chr1:36056276 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_21522 0 0 0 0 1 nucleoplasm 0.438702938986857 0.43876587745677 0.23407354 0 hPsi_site_15246 iPseU_CNN:0.23407354;iRNA_PseU:0 15247 chr16 50120226 50120226 1 + G A LUSC 50120225 + 50120205 50120245 41 GCCGCAGCCCTTCAGACGCTTGCACAGCATCTGTCACAGCT GCCGCAGCCCTTCAGACGCTTACACAGCATCTGTCACAGCT < 41bp 0.540596505986481 0.893479595976467 0.13984033 0.3864047 prediction 0.705766179979972 Functional Gain - HEATR3 ENSG00000155393 CDS Human protein_coding chr16:50120225 chr16:50120226 nonsynonymous SNV 0.921 2 22 hPsi_associated_SNPs_21523 0 0 1 0 1 Ribosome 0.438697616345319 0.438622420745478 0 0 hPsi_site_15247 iPseU_CNN:0;iRNA_PseU:0 15248 chr3 148714191 148714191 1 + C A HNSC 148714190 + 148714170 148714210 41 GAAGAGGCCAGAGTTGGGTGTCACGCTGACAAAGCTCCACT GAAGAGGCCAGAGTTGGGTGTAACGCTGACAAAGCTCCACT < 41bp 0.498924301353498 0.852882764665607 0.14430079 0.5748626 prediction 0.705765529331214 Functional Gain - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148714190 chr3:148714191 synonymous SNV . 0 22 hPsi_associated_SNPs_21524 0 0 0 0 1 Cytosol 0.438680642868164 0.438714674921201 0.1497252 0 hPsi_site_15248 iPseU_CNN:0.1497252;iRNA_PseU:0 15249 chr1 12921372 12921372 1 + G A UCEC 12921371 + 12921351 12921391 41 CCTTCTACTTTGGCAGCAATTGCATGTCTATTGACGCCCTG CCTTCTACTTTGGCAGCAATTACATGTCTATTGACGCCCTG < 41bp 0.480295076253377 0.852872317281644 0.28707594 0.32947764 prediction 0.705744634563289 Functional Gain - PRAMEF2 ENSG00000120952 CDS Human protein_coding chr1:12921371 chr1:12921372 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21525 0 0 0 0 0 unknown 0.438560547795437 0.438659891450287 0 0 hPsi_site_15249 iPseU_CNN:0;iRNA_PseU:0 15250 chr17 9536263 9536263 1 + C A CESC 9536262 + 9536242 9536282 41 GACAGGCCGACTGATGTATGTCATTAACAATGCTCACAGGA GACAGGCCGACTGATGTATGTAATTAACAATGCTCACAGGA < 41bp 0.502842092474725 0.855668607000219 0.15739357 0.5611145 prediction 0.705653029050987 Functional Gain - CFAP52 ENSG00000166596 CDS Human protein_coding chr17:9536262 chr17:9536263 synonymous SNV . 0 22 hPsi_associated_SNPs_21526 0 0 0 0 2 nucleus 0.438717667930415 0.438718313867433 0.122229 0 hPsi_site_15250 iPseU_CNN:0.122229;iRNA_PseU:0 15251 chr1 233514925 233514925 1 + G A SKCM 233514924 + 233514904 233514944 41 AAAACGGAGTCAGCTCTGTATGGGTGCACCGTCCTTCTGGC AAAACGGAGTCAGCTCTGTATAGGTGCACCGTCCTTCTGGC < 41bp 0.457065349932115 0.852823247425338 0.3453838 0.7781613 prediction 0.705646494850676 Functional Gain - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514924 chr1:233514925 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21527 0 0 1 0 0 unknown 0.438690576037854 0.438707296500439 0.5563226 0 hPsi_site_15251 iPseU_CNN:0.5563226;iRNA_PseU:0 15252 chr11 57373595 57373595 1 + G A STAD 57373594 + 57373574 57373614 41 GGAGCTCATCAACACCTGGGTGGCCAAGAACACCAACAACA GGAGCTCATCAACACCTGGGTAGCCAAGAACACCAACAACA < 41bp 0.442172162773111 0.852817438978329 0.14969471 0.3099864 prediction 0.705634877956659 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57373594 chr11:57373595 synonymous SNV . 0 22 hPsi_associated_SNPs_21528 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438714403194503 0 0 hPsi_site_15252 iPseU_CNN:0;iRNA_PseU:0 15253 chr17 34149669 34149669 1 + G A BLCA 34149668 + 34149648 34149688 41 GGTGGAAGAGCACCTTCCTATGACCAGCCAGACTATGGTCA GGTGGAAGAGCACCTTCCTATAACCAGCCAGACTATGGTCA < 41bp 0.455979019613697 0.85280759410964 0.30615443 0.62341285 prediction 0.70561518821928 Functional Gain - TAF15 ENSG00000172660 CDS Human other chr17:34149668 chr17:34149669 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21529 0 0 1 0 1 Cytosol 0.438718592995251 0.438718592995102 0.2468257 0 hPsi_site_15253 iPseU_CNN:0.2468257;iRNA_PseU:0 15254 chr5 79950719 79950719 1 + C T rs201149584 79950720 - 79950700 79950740 41 GCTGGGGGCGCTGCGGCCGCTGCGGCCGCTGCAGCCGCTGC GCTGGGGGCGCTGCGGCCGCTACGGCCGCTGCAGCCGCTGC < 41bp 0.493019822737001 0.852806832026066 0.30998522 0.73851216 prediction 0.705613664052132 Functional Gain - MSH3 ENSG00000113318 CDS Human protein_coding chr5:79950720 chr5:79950719 nonsynonymous SNV 0.091 1 22 hPsi_associated_SNPs_21530 0 0 1 0 0 chromatin 0.438718592995102 0.43871859299503 0.47702432 0 hPsi_site_15254 iPseU_CNN:0.47702432;iRNA_PseU:0 15255 chr19 3746506 3746506 1 + G A SKCM 3746505 + 3746485 3746525 41 CAAGCATGCGCTCCTGGATGTGACCCCCTCCGCCATCGAGC CAAGCATGCGCTCCTGGATGTAACCCCCTCCGCCATCGAGC < 41bp 0.446035489002813 0.852806307317298 0.40868002 0.82197666 prediction 0.705612614634595 Functional Gain - TJP3 ENSG00000105289 CDS Human protein_coding chr19:3746505 chr19:3746506 synonymous SNV . 0 22 hPsi_associated_SNPs_21531 0 0 0 0 1 Ribosome 0.438719358298907 0.438720114497277 0.64395332 0 hPsi_site_15255 iPseU_CNN:0.64395332;iRNA_PseU:0 15256 chr19 35232785 35232785 1 + G A LUAD 35232784 + 35232764 35232804 41 AATGTGGGAAGACCTTCAGCTGTAGTTCAAACCTTACCGTA AATGTGGGAAGACCTTCAGCTATAGTTCAAACCTTACCGTA < 41bp 0.525679995141035 0.878480585385696 0.34758002 0.6807288 prediction 0.705601180489323 Functional Gain - ZNF181 ENSG00000197841 CDS Human protein_coding chr19:35232784 chr19:35232785 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21532 0 0 0 0 0 nucleus 0.438718270150297 0.438718498333671 0.3614576 0 hPsi_site_15256 iPseU_CNN:0.3614576;iRNA_PseU:0 15257 chr22 41922365 41922365 1 + G A STAD 41922364 + 41922344 41922384 41 TCCAACAACCTGCTCATTGGTGCCATCAACATTGAAAACGG TCCAACAACCTGCTCATTGGTACCATCAACATTGAAAACGG < 41bp 0.534206948941439 0.886996821589227 0.32316455 0.7210367 prediction 0.705579745295575 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41922364 chr22:41922365 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21533 0 0 1 0 2 chromatin 0.438717714044998 0.438712850208912 0.4420734 0 hPsi_site_15257 iPseU_CNN:0.4420734;iRNA_PseU:0 15258 chr5 131726433 131726433 1 + G A LAML 131726432 + 131726412 131726452 41 TTCGCTTGATACTCCTAACTTGCATGGGGACATCTTTGTGA TTCGCTTGATACTCCTAACTTACATGGGGACATCTTTGTGA < 41bp 0.451357149407361 0.852765745424172 0.35086733 0.47449964 prediction 0.705531490848343 Functional Gain - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131726432 chr5:131726433 synonymous SNV . 0 22 hPsi_associated_SNPs_21534 0 0 1 0 1 chromatin 0.438718327418937 0.438717841754889 0 0 hPsi_site_15258 iPseU_CNN:0;iRNA_PseU:0 15259 chr22 45724275 45724275 1 + G A rs28459167 45724274 + 45724254 45724294 41 CTTGAAGGACAAGACCAAGGTGTGGGCTGGGGCTGCGGGCA CTTGAAGGACAAGACCAAGGTATGGGCTGGGGCTGCGGGCA < 41bp 0.4676655602785 0.852764564298577 0.28909487 0.3529461 prediction 0.705529128597154 Functional Gain - FAM118A ENSG00000100376 CDS Human protein_coding chr22:45724274 chr22:45724275 synonymous SNV . 0 22 hPsi_associated_SNPs_21535 0 0 1 0 0 Cytosol 0.438718592995141 0.438718592995096 0 0 hPsi_site_15259 iPseU_CNN:0;iRNA_PseU:0 15260 chr21 43708071 43708071 1 + G A STAD 43708070 + 43708050 43708090 41 GAGCGGTTCGGGAGGGCATGTGTGACTCAGACCACAAGAGA GAGCGGTTCGGGAGGGCATGTATGACTCAGACCACAAGAGA < 41bp 0.538747219653936 0.891511642625103 0.64030933 0.8940862 prediction 0.705528845942332 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43708070 chr21:43708071 nonsynonymous SNV 0.944 3 22 hPsi_associated_SNPs_21536 0 0 0 0 2 Cytosol 0.438785726700029 0.438718898652625 0.50755374 0 hPsi_site_15260 iPseU_CNN:0.50755374;iRNA_PseU:0 15261 chr5 40681528 40681528 1 + G A UCEC 40681527 + 40681507 40681547 41 CTCACGCTCTTTGCAGTCTATGCGTCCAACGTGCTCTTTTG CTCACGCTCTTTGCAGTCTATACGTCCAACGTGCTCTTTTG < 41bp 0.464741218553234 0.852763011690028 0.28275472 0.7555853 prediction 0.705526023380056 Functional Gain - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681527 chr5:40681528 nonsynonymous SNV 0.629 0 22 hPsi_associated_SNPs_21537 0 0 0 0 0 Cytosol 0.438710261799762 0.438717997042797 0.5111706 0 hPsi_site_15261 iPseU_CNN:0.5111706;iRNA_PseU:0 15262 chr6 7845453 7845453 1 + G A SKCM 7845452 + 7845432 7845472 41 TTATCCCAGATTCCTGAGGGTGAGGTGGTGACGGCTGCAGA TTATCCCAGATTCCTGAGGGTAAGGTGGTGACGGCTGCAGA < 41bp 0.45458353589957 0.852752520299267 0.22489035 0.4464086 prediction 0.705505040598535 Functional Gain - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7845452 chr6:7845453 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21538 0 0 1 0 1 Ribosome 0.438721854070835 0.438718549517263 0 0 hPsi_site_15262 iPseU_CNN:0;iRNA_PseU:0 15263 chr15 90610643 90610643 1 + G A ESCA 90610642 + 90610622 90610662 41 CTGGAGGTGGAGGCAGCCTGTGAGAAGCACACCCGGCGGAA CTGGAGGTGGAGGCAGCCTGTAAGAAGCACACCCGGCGGAA < 41bp 0.461714490475413 0.852740171582066 0.48621 0.9010331 prediction 0.705480343164132 Functional Gain - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90610642 chr15:90610643 nonsynonymous SNV 0.850 1 22 hPsi_associated_SNPs_21539 0 0 0 0 0 Endoplasmic reticulum 0.438718592994294 0.438718592993399 0.8020662 0 hPsi_site_15263 iPseU_CNN:0.8020662;iRNA_PseU:0 15264 chr20 3778334 3778334 1 + C A LUSC 3778333 + 3778313 3778353 41 GCAGCCGCCTGACGCACCTATCCCTGTCTCGACGGGCATCC GCAGCCGCCTGACGCACCTATACCTGTCTCGACGGGCATCC < 41bp 0.500947446994772 0.853686359126848 0.25294578 0.75131136 prediction 0.705477824264152 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3778333 chr20:3778334 nonsynonymous SNV 0.016 3 22 hPsi_associated_SNPs_21540 0 0 1 0 3 Ribosome 0.438718595981145 0.438717845374801 0.50262272 0 hPsi_site_15264 iPseU_CNN:0.50262272;iRNA_PseU:0 15265 chr22 38151170 38151170 1 + G A rs11704996 38151169 + 38151149 38151189 41 GGATGTCACTGAGTACGCGGTGCAGCGCAACTATGGCTTCC GGATGTCACTGAGTACGCGGTACAGCGCAACTATGGCTTCC < 41bp 0.464694373358624 0.85273818634144 0.6038991 0.85053545 prediction 0.705476372682881 Functional Gain - TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38151169 chr22:38151170 synonymous SNV . 0 22 hPsi_associated_SNPs_21541 1 0 1 0 2 Ribosome 0.437665534291369 0.434074075568382 0.4932727 0 hPsi_site_15265 iPseU_CNN:0.4932727;iRNA_PseU:0 15266 chrX 151815615 151815615 1 + G A UCEC 151815614 + 151815594 151815634 41 GCTTCACCCAGATGGAACGGTGCGGTACGGCATCCGGTGAG GCTTCACCCAGATGGAACGGTACGGTACGGCATCCGGTGAG < 41bp 0.459156226263918 0.852736520618866 0.6000309 0.92167366 prediction 0.705473041237732 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151815614 chrX:151815615 synonymous SNV . 0 22 hPsi_associated_SNPs_21542 0 0 0 0 1 chromatin 0.438715742555069 0.438680966244575 0.64328552 0 hPsi_site_15266 iPseU_CNN:0.64328552;iRNA_PseU:0 15267 chr11 71907066 71907066 1 + G A STAD 71907065 + 71907045 71907085 41 AGCAACTACAGCCGAGGGAGTGGCCGCTGCATCCAGATGTG AGCAACTACAGCCGAGGGAGTAGCCGCTGCATCCAGATGTG < 41bp 0.459019002121209 0.852728496566963 0.18113896 0.34207946 prediction 0.705456993133927 Functional Gain - FOLR1 ENSG00000110195 CDS Human protein_coding chr11:71907065 chr11:71907066 nonsynonymous SNV 0.940 4 22 hPsi_associated_SNPs_21543 0 0 0 0 0 Endoplasmic reticulum 0.438730386914162 0.438721546458275 0 0 hPsi_site_15267 iPseU_CNN:0;iRNA_PseU:0 15268 chr9 104324610 104324610 1 + G A STAD 104324609 + 104324589 104324629 41 TTCATGTCTTCTGCTTTGAGTGTGTGAAGACACGCTATGAC TTCATGTCTTCTGCTTTGAGTATGTGAAGACACGCTATGAC < 41bp 0.480913225365877 0.85272154590031 0.24926329 0.26467136 prediction 0.70544309180062 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104324609 chr9:104324610 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21544 0 0 1 0 1 nucleus 0.437937080010339 0.438691664366337 0 0 hPsi_site_15268 iPseU_CNN:0;iRNA_PseU:0 15269 chr19 45254578 45254578 1 + G A SKCM 45254577 + 45254557 45254597 41 ATACCCCATGATGTGCCCCATGGAACACCCCCTTTCTGCTG ATACCCCATGATGTGCCCCATAGAACACCCCCTTTCTGCTG < 41bp 0.461810888692247 0.852717614419746 0.2888538 0.42750052 prediction 0.705435228839492 Functional Gain - BCL3 ENSG00000069399 CDS Human protein_coding chr19:45254577 chr19:45254578 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_21545 0 0 1 0 2 chromatin 0.438718671307043 0.438718598505048 0 0 hPsi_site_15269 iPseU_CNN:0;iRNA_PseU:0 15270 chr21 47410932 47410932 1 + G A LUSC 47410931 + 47410911 47410951 41 GGCCCCAAGGGAGACCCCGGTGCCTTTGGACTGAAAGGAGA GGCCCCAAGGGAGACCCCGGTACCTTTGGACTGAAAGGAGA < 41bp 0.456779491392675 0.852717260093835 0.312159 0.63138294 prediction 0.705434520187669 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47410931 chr21:47410932 nonsynonymous SNV 0.129 1 22 hPsi_associated_SNPs_21546 1 0 0 0 2 exosome 0.438718592995102 0.438718592998228 0.26276588 0 hPsi_site_15270 iPseU_CNN:0.26276588;iRNA_PseU:0 15271 chr18 8825900 8825900 1 + G A STAD 8825899 + 8825879 8825919 41 GGACCCCTTCCAGAAGGGGCTGCGGGCCGGCAGTCGGTCTC GGACCCCTTCCAGAAGGGGCTACGGGCCGGCAGTCGGTCTC < 41bp 0.533810632715128 0.886522031903121 0.22987604 0.48101452 prediction 0.705422798375986 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8825899 chr18:8825900 synonymous SNV . 0 22 hPsi_associated_SNPs_21547 0 0 0 0 0 Nucleus 0.438718216711368 0.43871852405632 0 0 hPsi_site_15271 iPseU_CNN:0;iRNA_PseU:0 15272 chr1 86047909 86047909 1 + G A rs9658586 86047908 + 86047888 86047928 41 CGATGCCTCCGAGGTGGAGTTGACGAGAAACAATGAATTGA CGATGCCTCCGAGGTGGAGTTAACGAGAAACAATGAATTGA < 41bp 0.456004191254309 0.852695665043425 0.1975841 0.4955401 prediction 0.705391330086851 Functional Gain - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047908 chr1:86047909 synonymous SNV . 0 22 hPsi_associated_SNPs_21548 0 0 1 0 1 Endoplasmic reticulum 0.438718591523688 0.438759637882981 0 0 hPsi_site_15272 iPseU_CNN:0;iRNA_PseU:0 15273 chr19 57839932 57839932 1 + G A STAD 57839931 + 57839911 57839951 41 CACACTGGAGTGAAACCCTTTGAATGCAACGAGTGTGGAAA CACACTGGAGTGAAACCCTTTAAATGCAACGAGTGTGGAAA < 41bp 0.46327396392991 0.852688027758624 0.21113577 0.4061818 prediction 0.705376055517248 Functional Gain - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57839931 chr19:57839932 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_21549 0 0 1 0 0 Nucleus 0.438488803231386 0.438708297414537 0 0 hPsi_site_15273 iPseU_CNN:0;iRNA_PseU:0 15274 chr1 11866383 11866383 1 + G A COAD 11866382 + 11866362 11866402 41 TGCTGCTGCTGCGGTGAGCGTGAGACCCGCACCCCCGAGGA TGCTGCTGCTGCGGTGAGCGTAAGACCCGCACCCCCGAGGA < 41bp 0.519931835918978 0.87261698942836 0.32429522 0.81091607 prediction 0.705370307018764 Functional Gain - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11866382 chr1:11866383 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_21550 0 0 1 0 1 Endoplasmic reticulum 0.438718585295702 0.438718349937205 0.62183214 0 hPsi_site_15274 iPseU_CNN:0.62183214;iRNA_PseU:0 15275 chr21 47421228 47421228 1 + G A COAD 47421227 + 47421207 47421247 41 CAGCTCAGAGAGCATTGGCCTGCAGAACTTCGAGATTGCCA CAGCTCAGAGAGCATTGGCCTACAGAACTTCGAGATTGCCA < 41bp 0.45430953619273 0.852677740283885 0.27502853 0.31560957 prediction 0.70535548056777 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47421227 chr21:47421228 synonymous SNV . 0 22 hPsi_associated_SNPs_21551 0 0 1 0 2 exosome 0.438718628065684 0.438718536473579 0 0 hPsi_site_15275 iPseU_CNN:0;iRNA_PseU:0 15276 chr10 86012696 86012696 1 + C A UCEC 86012695 + 86012675 86012715 41 TTCTGGGCAGCTCTGCCCCTTCTGGGTTGGGGTCACTACGA TTCTGGGCAGCTCTGCCCCTTATGGGTTGGGGTCACTACGA < 41bp 0.506571918676994 0.859242646328101 0.27560005 0.3293039 prediction 0.705341455302215 Functional Gain - RGR ENSG00000148604 CDS Human protein_coding chr10:86012695 chr10:86012696 nonsynonymous SNV 0.809 0 22 hPsi_associated_SNPs_21552 0 0 0 0 2 unknown 0.43871859210974 0.438719178618661 0 0 hPsi_site_15276 iPseU_CNN:0;iRNA_PseU:0 15277 chr1 20220908 20220908 1 + G A UCEC 20220907 + 20220887 20220927 41 TTTGCTGGCAATGATGCAATTGTAGCCTTTGCAAGAAATCA TTTGCTGGCAATGATGCAATTATAGCCTTTGCAAGAAATCA < 41bp 0.526560925511587 0.879220628121506 0.20815736 0.26761353 prediction 0.705319405219837 Functional Gain - OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20220907 chr1:20220908 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21553 0 0 1 0 2 Cytosol 0.457911525605207 0.441682593527997 0 0 hPsi_site_15277 iPseU_CNN:0;iRNA_PseU:0 15278 chr8 22461104 22461104 1 + G A rs150650211 22461103 + 22461083 22461123 41 ATTGTCAGGTGTCCGTGGAGTGTTTTTGGCATGGTGACCTG ATTGTCAGGTGTCCGTGGAGTATTTTTGGCATGGTGACCTG < 41bp 0.489974932252477 0.852656638395059 0.26149476 0.3244189 prediction 0.705313276790118 Functional Gain - C8orf58 ENSG00000241852 UTR3 Human protein_coding chr8:22461103 chr8:22461104 . . 0 22 hPsi_associated_SNPs_21554 0 0 0 0 0 exosome 0.438696971049217 0.438698028291158 0 0 hPsi_site_15278 iPseU_CNN:0;iRNA_PseU:0 15279 chr17 18702218 18702218 1 + G A COAD 18702217 + 18702197 18702237 41 CCAGTACTGTGGGTGATATTTGCTTTTAGTGCACTCTTCTC CCAGTACTGTGGGTGATATTTACTTTTAGTGCACTCTTCTC < 41bp 0.522214382406565 0.874860958321086 0.18110603 0.4963535 prediction 0.705293151829041 Functional Gain - TVP23B ENSG00000171928 CDS Human protein_coding chr17:18702217 chr17:18702218 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_21555 0 0 0 0 2 Ribosome 0.438718448835512 0.438708555322432 0 0 hPsi_site_15279 iPseU_CNN:0;iRNA_PseU:0 15280 chr16 71570682 71570682 1 + G A rs75819314 71570681 + 71570661 71570701 41 CAGCCACAACATCAGCTCCCTGTCTATGAAGGCACAGCCCG CAGCCACAACATCAGCTCCCTATCTATGAAGGCACAGCCCG < 41bp 0.477015579381988 0.852639632052945 0.3231445 0.46190292 prediction 0.70527926410589 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71570681 chr16:71570682 synonymous SNV . 0 22 hPsi_associated_SNPs_21556 0 0 0 0 0 exosome 0.439298635673488 0.439120405656108 0 0 hPsi_site_15280 iPseU_CNN:0;iRNA_PseU:0 15281 chr3 49212314 49212314 1 + G A COAD 49212313 + 49212293 49212333 41 TGAAGGCAGCGTCTTTAGCCTGGGTGGCCTGCAGCAGCCTG TGAAGGCAGCGTCTTTAGCCTAGGTGGCCTGCAGCAGCCTG < 41bp 0.46496096755938 0.852636933630346 0.27483568 0.29866248 prediction 0.705273867260692 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212313 chr3:49212314 synonymous SNV . 0 22 hPsi_associated_SNPs_21557 0 0 1 0 1 Cytosol 0.43870492358358 0.438824206871485 0 0 hPsi_site_15281 iPseU_CNN:0;iRNA_PseU:0 15282 chr17 56280605 56280605 1 + G A rs144768455 56280604 + 56280584 56280624 41 GGCCATCGCTGAGCCTCTTTTGCCGGGGGCTCGAGTGGGGC GGCCATCGCTGAGCCTCTTTTACCGGGGGCTCGAGTGGGGC < 41bp 0.468990972393943 0.852624299317403 0.34713984 0.5195283 prediction 0.705248598634806 Functional Gain - EPX ENSG00000121053 CDS Human protein_coding chr17:56280604 chr17:56280605 synonymous SNV . 0 22 hPsi_associated_SNPs_21558 0 0 0 0 1 chromatin 0.438718592993726 0.438718592994778 0.0390566000000001 0 hPsi_site_15282 iPseU_CNN:0.0390566000000001;iRNA_PseU:0 15283 chr6 41196714 41196714 1 + G A UCEC 41196713 + 41196693 41196733 41 ATGACTCGGGATTCTACTGGTGTGGAATCTACAACGCTTCC ATGACTCGGGATTCTACTGGTATGGAATCTACAACGCTTCC < 41bp 0.4653503301073 0.852621492816397 0.75737286 0.7926015 prediction 0.705242985632793 Functional Gain - TREML4 ENSG00000188056 CDS Human protein_coding chr6:41196713 chr6:41196714 nonsynonymous SNV 0.088 3 22 hPsi_associated_SNPs_21559 0 0 0 0 1 exosome 0.438718248285832 0.438718803296532 0.0704572799999998 0 hPsi_site_15283 iPseU_CNN:0.0704572799999998;iRNA_PseU:0 15284 chr11 65123651 65123651 1 + G A HNSC 65123650 + 65123630 65123670 41 CGTGCCCAGCATCGGCTGGCTGGTCCGCTGGAAACGCCGAA CGTGCCCAGCATCGGCTGGCTAGTCCGCTGGAAACGCCGAA < 41bp 0.529025762341807 0.881643388198469 0.2191132 0.42133716 prediction 0.705235251713323 Functional Gain - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123650 chr11:65123651 synonymous SNV . 0 22 hPsi_associated_SNPs_21560 0 0 0 0 0 Endoplasmic reticulum 0.438718596909479 0.438718594715417 0 0 hPsi_site_15284 iPseU_CNN:0;iRNA_PseU:0 15285 chr16 3254387 3254387 1 + G A UCEC 3254386 + 3254366 3254406 41 GGGGAACCTGCTCATCATCCTGTCCGTAAGCATAGACTCCT GGGGAACCTGCTCATCATCCTATCCGTAAGCATAGACTCCT < 41bp 0.474872324610758 0.852598850346592 0.1768615 0.31608626 prediction 0.705197700693184 Functional Gain - OR1F1 ENSG00000168124 CDS Human protein_coding chr16:3254386 chr16:3254387 synonymous SNV . 0 22 hPsi_associated_SNPs_21561 0 0 0 0 0 exosome 0.43871857132356 0.438718590395357 0 0 hPsi_site_15285 iPseU_CNN:0;iRNA_PseU:0 15286 chr1 156883246 156883246 1 + G A SKCM 156883245 + 156883225 156883265 41 CCAGGTGGGGCCCAAGGGCATGATAACCACACCACCCTGCC CCAGGTGGGGCCCAAGGGCATAATAACCACACCACCCTGCC < 41bp 0.450363224455093 0.852593181432727 0.25636685 0.5453448 prediction 0.705186362865455 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156883245 chr1:156883246 nonsynonymous SNV 0.154 2 22 hPsi_associated_SNPs_21562 0 0 0 0 2 cytosol 0.438718596165014 0.438718592999293 0.0906895999999999 0 hPsi_site_15286 iPseU_CNN:0.0906895999999999;iRNA_PseU:0 15287 chr3 185335316 185335316 1 + G A LUSC 185335315 + 185335295 185335335 41 CTAGGCCATGGCCCACAGGATGAAATCCTAAGTAGTGCTTT CTAGGCCATGGCCCACAGGATAAAATCCTAAGTAGTGCTTT < 41bp 0.53421223701452 0.886791427681735 0.46597746 0.82627225 prediction 0.705158381334432 Functional Gain - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185335315 chr3:185335316 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_21563 0 0 0 0 2 Ribosome 0.438699088367753 0.43846756492358 0.6525445 0 hPsi_site_15287 iPseU_CNN:0.6525445;iRNA_PseU:0 15288 chrX 47098800 47098800 1 + G A SKCM 47098799 + 47098779 47098819 41 CTGGTGGAAGGCGAGGATTATGTGCTGCTCCCAGCAGCTGC CTGGTGGAAGGCGAGGATTATATGCTGCTCCCAGCAGCTGC < 41bp 0.459315851154441 0.852572342245523 0.35748702 0.36906683 prediction 0.705144684491046 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47098799 chrX:47098800 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_21564 0 0 1 0 2 cytosol 0.438715025110396 0.438718852923592 0 0 hPsi_site_15288 iPseU_CNN:0;iRNA_PseU:0 15289 chr17 61681964 61681964 1 + G A STAD 61681963 + 61681943 61681983 41 GGTGTGTCGCAGCAAACATATGCCCAAGTCAACGATTGAGA GGTGTGTCGCAGCAAACATATACCCAAGTCAACGATTGAGA < 41bp 0.453390435114321 0.852568420154748 0.42015868 0.6830038 prediction 0.705136840309497 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61681963 chr17:61681964 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21565 0 0 1 0 2 Ribosome 0.438709497747327 0.438705444504246 0.3660076 0 hPsi_site_15289 iPseU_CNN:0.3660076;iRNA_PseU:0 15290 chr16 57718064 57718064 1 + G A SARC 57718063 + 57718043 57718083 41 TTCCACCTCTACCTGCTCGCTGTCAGGGTCTTCAACACCTA TTCCACCTCTACCTGCTCGCTATCAGGGTCTTCAACACCTA < 41bp 0.527445768164128 0.880012334428563 0.24321997 0.33460352 prediction 0.705133132528869 Functional Gain - ADGRG3 ENSG00000182885 CDS Human protein_coding chr16:57718063 chr16:57718064 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_21566 0 0 0 0 1 Nucleus 0.438717260763295 0.438707953833806 0 0 hPsi_site_15290 iPseU_CNN:0;iRNA_PseU:0 15291 chr9 33246683 33246683 1 + G A SKCM 33246682 + 33246662 33246702 41 AACCTGGTCTGCGGCACTGATGGGCTCACATATACGAATGA AACCTGGTCTGCGGCACTGATAGGCTCACATATACGAATGA < 41bp 0.462068956136999 0.852566262256649 0.22033784 0.37749648 prediction 0.705132524513297 Functional Gain - SPINK4 ENSG00000122711 CDS Human protein_coding chr9:33246682 chr9:33246683 nonsynonymous SNV 0.795 4 22 hPsi_associated_SNPs_21567 0 0 0 0 2 Endoplasmic reticulum 0.438716434461345 0.442322299128786 0 0 hPsi_site_15291 iPseU_CNN:0;iRNA_PseU:0 15292 chr3 141464082 141464082 1 + G A DLBC 141464081 + 141464061 141464101 41 AGAACAATCGCTGCCCTCTCTGCCAGCAGGACTGGGTGGTC AGAACAATCGCTGCCCTCTCTACCAGCAGGACTGGGTGGTC < 41bp 0.470216794649882 0.852558090975842 0.19173166 0.28160787 prediction 0.705116181951683 Functional Gain - RNF7 ENSG00000114125 CDS Human protein_coding chr3:141464081 chr3:141464082 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21568 0 0 1 1 1 Ribosome 0.438713235361687 0.438562515939124 0 0 hPsi_site_15292 iPseU_CNN:0;iRNA_PseU:0 15293 chr7 2687168 2687168 1 + G A UCEC 2687167 + 2687147 2687187 41 CGTACAGAGGCTGCAGGGCCTGCTGGAGACGCTGCTGGGCT CGTACAGAGGCTGCAGGGCCTACTGGAGACGCTGCTGGGCT < 41bp 0.463643481058081 0.852549297603103 0.3763114 0.8143109 prediction 0.705098595206206 Functional Gain - TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2687167 chr7:2687168 synonymous SNV . 0 22 hPsi_associated_SNPs_21569 0 0 0 0 0 Ribosome 0.438718593014177 0.438718592995192 0.6286218 0 hPsi_site_15293 iPseU_CNN:0.6286218;iRNA_PseU:0 15294 chr9 84605862 84605862 1 + G A SKCM 84605861 + 84605841 84605881 41 TGCTCCCTCTGTGTCCCCTTTGGCTTCTTCGGCTTCTGCGA TGCTCCCTCTGTGTCCCCTTTAGCTTCTTCGGCTTCTGCGA < 41bp 0.468073568404801 0.852529899800884 0.3538419 0.68589175 prediction 0.705059799601768 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84605861 chr9:84605862 synonymous SNV . 0 22 hPsi_associated_SNPs_21570 0 0 0 0 0 exosome 0.438718593367138 0.438715537454317 0.3717835 0 hPsi_site_15294 iPseU_CNN:0.3717835;iRNA_PseU:0 15295 chr1 28862454 28862454 1 + G A rs113449876 28862453 + 28862433 28862473 41 GGCCACGTGAGATTCCAGGATGCCTTTTGTGGTGCCTATTT GGCCACGTGAGATTCCAGGATACCTTTTGTGGTGCCTATTT < 41bp 0.540905673290696 0.893427925511905 0.2628355 0.3576607 prediction 0.705044504442419 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862453 chr1:28862454 nonsynonymous SNV 0.935 0 22 hPsi_associated_SNPs_21571 0 0 1 0 2 Ribosome 0.438723947499545 0.438729700458135 0 0 hPsi_site_15295 iPseU_CNN:0;iRNA_PseU:0 15296 chr19 31039059 31039059 1 + C A LUAD 31039058 + 31039038 31039078 41 CTGAGGGGGGCCTTCAAGGGTCTCCCTGGAATCGACTTCAG CTGAGGGGGGCCTTCAAGGGTATCCCTGGAATCGACTTCAG < 41bp 0.500646234387449 0.853168450381365 0.25241935 0.58798456 prediction 0.705044431987832 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31039058 chr19:31039059 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_21572 0 0 0 0 0 exosome 0.438718592994763 0.438718592987048 0.17596912 0 hPsi_site_15296 iPseU_CNN:0.17596912;iRNA_PseU:0 15297 chr19 54695254 54695254 1 + G A rs184898622 54695253 + 54695233 54695273 41 GGCGAACGGCCGCTCCCTGGTGTGGGGAGCCGAGGCGGTGC GGCGAACGGCCGCTCCCTGGTATGGGGAGCCGAGGCGGTGC < 41bp 0.467680496670473 0.852512460840697 0.29948345 0.59043723 prediction 0.705024921681394 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54695253 chr19:54695254 synonymous SNV . 0 22 hPsi_associated_SNPs_21573 2 0 1 0 1 Ribosome 0.438711039629444 0.438468758419858 0.18087446 0 hPsi_site_15297 iPseU_CNN:0.18087446;iRNA_PseU:0 15298 chr1 29070129 29070129 1 + G A BLCA 29070128 + 29070108 29070148 41 GGATGCTGCTTATCGTTCCATGAACGGGAAAGGCCCCGTTT GGATGCTGCTTATCGTTCCATAAACGGGAAAGGCCCCGTTT < 41bp 0.481486489688401 0.852512419358461 0.2981879 0.6274797 prediction 0.705024838716922 Functional Gain - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29070128 chr1:29070129 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21574 0 0 1 0 0 Cytosol 0.438675799018145 0.438718279374765 0.2549594 0 hPsi_site_15298 iPseU_CNN:0.2549594;iRNA_PseU:0 15299 chr8 128753130 128753130 1 + G A BRCA 128753129 + 128753109 128753149 41 GAGGAGCAAAAGCTCATTTCTGAAGAGGACTTGTTGCGGAA GAGGAGCAAAAGCTCATTTCTAAAGAGGACTTGTTGCGGAA < 41bp 0.475288684203832 0.852500388093318 0.19024125 0.24385256 prediction 0.705000776186635 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128753129 chr8:128753130 nonsynonymous SNV 0.325 2 22 hPsi_associated_SNPs_21575 0 0 1 0 0 Cytosol 0.438718649095105 0.438717125967839 0 0 hPsi_site_15299 iPseU_CNN:0;iRNA_PseU:0 15300 chr9 136223824 136223824 1 + G A UCEC 136223823 + 136223803 136223843 41 TGACAGGTCACGAGCTGCCCTGCCGCCTGCCGGAGCTCCAG TGACAGGTCACGAGCTGCCCTACCGCCTGCCGGAGCTCCAG < 41bp 0.469223376685406 0.852499398790929 0.26734668 0.33342645 prediction 0.704998797581858 Functional Gain - SURF2 ENSG00000148291 CDS Human protein_coding chr9:136223823 chr9:136223824 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_21576 0 0 1 0 1 Ribosome 0.438718588073309 0.438718592759264 0 0 hPsi_site_15300 iPseU_CNN:0;iRNA_PseU:0 15301 chr7 143826547 143826547 1 + G A rs545498324 143826546 + 143826526 143826566 41 TCACGTAGAGTGTCTGATTTTGGTGGTGATGTCCTATGATC TCACGTAGAGTGTCTGATTTTAGTGGTGATGTCCTATGATC < 41bp 0.485062463536997 0.852495319085943 0.41410074 0.786186 prediction 0.704990638171887 Functional Gain - OR2A14 ENSG00000221938 CDS Human protein_coding chr7:143826546 chr7:143826547 synonymous SNV . 0 22 hPsi_associated_SNPs_21577 0 0 0 0 0 unknown 0.438996199788507 0.438684109058194 0.572372 0 hPsi_site_15301 iPseU_CNN:0.572372;iRNA_PseU:0 15302 chr14 59113692 59113692 1 + G A SKCM 59113691 + 59113671 59113711 41 AAGAAAGCGGGGGCTTAATTTGGTCCCAGTTTGTCCAGACT AAGAAAGCGGGGGCTTAATTTAGTCCCAGTTTGTCCAGACT < 41bp 0.53043478469455 0.882926719148662 0.3047825 0.6870716 prediction 0.704983868908225 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113691 chr14:59113692 stopgain 0.977 1 22 hPsi_associated_SNPs_21578 0 0 0 0 0 exosome 0.438718592996046 0.438718592733556 0.3741432 0 hPsi_site_15302 iPseU_CNN:0.3741432;iRNA_PseU:0 15303 chr16 84497404 84497404 1 + G A rs138830565 84497403 + 84497383 84497423 41 TGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAGGGGAGAC TGTGACTGTGGCCCCTGCCGTATCTCCTCGTCAGGGGAGAC < 41bp 0.472253896660206 0.852485969524474 0.28266805 0.7032775 prediction 0.704971939048949 Functional Gain - ATP2C2-AS1 ENSG00000261286 ncRNA_intronic Human antisense chr16:84497403 chr16:84497404 . . 0 22 hPsi_associated_SNPs_21579 0 0 0 0 0 unknown 0.438687234429398 0.438714940944517 0.406555 0 hPsi_site_15303 iPseU_CNN:0.406555;iRNA_PseU:0 15304 chr1 40734136 40734136 1 + G A COAD 40734135 + 40734115 40734155 41 CTGTTGGCTACACTTTTCAGTGCATTGACTGGTTTGCCATG CTGTTGGCTACACTTTTCAGTACATTGACTGGTTTGCCATG < 41bp 0.520341135871578 0.872817054785296 0.34450796 0.53568584 prediction 0.704951837827436 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40734135 chr1:40734136 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21580 0 0 1 0 2 Endoplasmic reticulum 0.431904338215164 0.432913565362632 0.0713716799999999 0 hPsi_site_15304 iPseU_CNN:0.0713716799999999;iRNA_PseU:0 15305 chr19 47422569 47422569 1 + G A COAD 47422568 + 47422548 47422588 41 GTTGAGCGGTACATTAGAGATGCACATACTTTTGCCTTAAG GTTGAGCGGTACATTAGAGATACACATACTTTTGCCTTAAG < 41bp 0.482586552808365 0.852475698722864 0.5161165 0.71727544 prediction 0.704951397445729 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422568 chr19:47422569 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21581 0 0 1 0 0 Ribosome 0.439020216706071 0.447137410190154 0.40231788 0 hPsi_site_15305 iPseU_CNN:0.40231788;iRNA_PseU:0 15306 chr7 141619455 141619455 1 + G A ESCA 141619454 + 141619434 141619474 41 CAGCTGCTTGTTTCTCTACGTGAAACCCAAGCAAACGCAGG CAGCTGCTTGTTTCTCTACGTAAAACCCAAGCAAACGCAGG < 41bp 0.502284672920168 0.854753510309565 0.29391268 0.6863909 prediction 0.704937674778795 Functional Gain - OR9A4 ENSG00000258083 CDS Human protein_coding chr7:141619454 chr7:141619455 synonymous SNV . 0 22 hPsi_associated_SNPs_21582 0 0 0 0 0 unknown 0.438677237862359 0.438717831238873 0.3727818 0 hPsi_site_15306 iPseU_CNN:0.3727818;iRNA_PseU:0 15307 chr5 43280276 43280276 1 + G A SKCM 43280275 + 43280255 43280295 41 GCACTACATCGGCATTTACGTGGATATCTGGGCCTTGGGGG GCACTACATCGGCATTTACGTAGATATCTGGGCCTTGGGGG < 41bp 0.455996652726555 0.852462341743846 0.14969143 0.2525641 prediction 0.704924683487691 Functional Gain - NIM1K ENSG00000177453 CDS Human protein_coding chr5:43280275 chr5:43280276 synonymous SNV . 0 22 hPsi_associated_SNPs_21583 0 0 0 0 0 exosome 0.438718592995102 0.438718714939116 0 0 hPsi_site_15307 iPseU_CNN:0;iRNA_PseU:0 15308 chr1 156105077 156105077 1 + G A UCEC 156105076 + 156105056 156105096 41 ATCCGCATCGACAGCCTCTCTGCCCAGCTCAGCCAGCTCCA ATCCGCATCGACAGCCTCTCTACCCAGCTCAGCCAGCTCCA < 41bp 0.461241220404393 0.852460048712091 0.31805336 0.4205793 prediction 0.704920097424182 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156105076 chr1:156105077 nonsynonymous SNV 0.944 2 22 hPsi_associated_SNPs_21584 0 0 1 0 2 Cytosol 0.438718513648456 0.438716803263328 0 0 hPsi_site_15308 iPseU_CNN:0;iRNA_PseU:0 15309 chr19 19162882 19162882 1 + G A SKCM 19162881 + 19162861 19162901 41 ACGTGGTCAGGGAAGCCTGCTGGGCCCTGCGTGTCATGACC ACGTGGTCAGGGAAGCCTGCTAGGCCCTGCGTGTCATGACC < 41bp 0.455921926289524 0.852457835595006 0.18643674 0.31067005 prediction 0.704915671190012 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19162881 chr19:19162882 stopgain 0.992 0 22 hPsi_associated_SNPs_21585 0 0 0 0 0 Ribosome 0.438718621258146 0.438718511192337 0 0 hPsi_site_15309 iPseU_CNN:0;iRNA_PseU:0 15310 chr8 144297245 144297245 1 + G A HNSC 144297244 + 144297224 144297264 41 CCTGCTGCCAGTCCAGCCTGTGCAATGTCCCACCCTGGCAA CCTGCTGCCAGTCCAGCCTGTACAATGTCCCACCCTGGCAA < 41bp 0.473110278576934 0.852456220950941 0.5728286 0.84135807 prediction 0.704912441901883 Functional Gain - GPIHBP1 ENSG00000182851 CDS Human other chr8:144297244 chr8:144297245 nonsynonymous SNV 0.172 2 22 hPsi_associated_SNPs_21586 0 0 0 0 0 exosome 0.438718592995097 0.438718592984423 0.53705894 0 hPsi_site_15310 iPseU_CNN:0.53705894;iRNA_PseU:0 15311 chr14 76488695 76488695 1 + G A HNSC 76488694 + 76488674 76488714 41 CCTCTGCTAAATTACCTCGCTGCCGACAGGGAGGCTGGGCA CCTCTGCTAAATTACCTCGCTACCGACAGGGAGGCTGGGCA < 41bp 0.459215858866628 0.852455342872269 0.2010692 0.29033875 prediction 0.704910685744538 Functional Gain - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76488694 chr14:76488695 nonsynonymous SNV 0.005 2 22 hPsi_associated_SNPs_21587 0 0 1 1 2 Ribosome 0.438718595134289 0.438724843689809 0 0 hPsi_site_15311 iPseU_CNN:0;iRNA_PseU:0 15312 chr11 67022423 67022423 1 + G A TGCT 67022422 + 67022402 67022442 41 CCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAA CCTTGATCGACCTTCGAGGATACAAGCAGATCACTCGAAAA < 41bp 0.479154988008887 0.852454326639426 0.32429647 0.7098171 prediction 0.704908653278851 Functional Gain - KDM2A ENSG00000173120 CDS Human protein_coding chr11:67022422 chr11:67022423 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21588 0 0 1 0 1 Cytosol 0.43871857449688 0.43871858972819 0.4196342 0 hPsi_site_15312 iPseU_CNN:0.4196342;iRNA_PseU:0 15313 chr7 6786813 6786813 1 + G A rs578225819 6786812 + 6786792 6786832 41 TCCCGAGTCAAGCAGATGTTTGCCTCCAGAGCCTGCCGGAA TCCCGAGTCAAGCAGATGTTTACCTCCAGAGCCTGCCGGAA < 41bp 0.471499743482709 0.852445351954269 0.21761 0.36656004 prediction 0.704890703908537 Functional Gain - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6786812 chr7:6786813 . . 0 22 hPsi_associated_SNPs_21589 0 0 0 0 1 unknown 0.438718592706497 0.438718572639394 0 0 hPsi_site_15313 iPseU_CNN:0;iRNA_PseU:0 15314 chr17 33310226 33310226 1 + G A UCEC 33310225 + 33310205 33310245 41 GGAAGCCATCTAAGATCACGTGCCACCTACCTTGTTTTCTT GGAAGCCATCTAAGATCACGTACCACCTACCTTGTTTTCTT < 41bp 0.532045732508185 0.884473287536361 0.2661656 0.63662076 prediction 0.704855110056352 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310225 chr17:33310226 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_21590 0 0 1 0 0 Cytosol 0.438718708006601 0.438718597743737 0.27324152 0 hPsi_site_15314 iPseU_CNN:0.27324152;iRNA_PseU:0 15315 chr2 46574124 46574124 1 + G A LGG 46574123 + 46574103 46574143 41 GAGCTGCCTCTGCCCCACAGTGTGAGCTCCCATCTGGACAA GAGCTGCCTCTGCCCCACAGTATGAGCTCCCATCTGGACAA < 41bp 0.455433360761605 0.852425230213882 0.2552601 0.24731216 prediction 0.704850460427763 Functional Gain - EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46574123 chr2:46574124 nonsynonymous SNV 0.926 3 22 hPsi_associated_SNPs_21591 0 0 1 0 1 Cytosol 0.438719033701932 0.43871874572338 0 0 hPsi_site_15315 iPseU_CNN:0;iRNA_PseU:0 15316 chr10 74890583 74890583 1 + G A ESCA 74890582 + 74890562 74890602 41 TGGGACTTTCCCATTCTGGCTGCCCCCTAAGTTAGCCATCT TGGGACTTTCCCATTCTGGCTACCCCCTAAGTTAGCCATCT < 41bp 0.46989295295819 0.85241361139577 0.12958819 0.25529647 prediction 0.70482722279154 Functional Gain - NUDT13 ENSG00000166321 CDS Human protein_coding chr10:74890582 chr10:74890583 synonymous SNV . 0 22 hPsi_associated_SNPs_21592 0 0 0 0 0 Cytosol 0.438718592995102 0.438718592995056 0 0 hPsi_site_15316 iPseU_CNN:0;iRNA_PseU:0 15317 chr10 103901271 103901271 1 + G A UCS 103901270 + 103901250 103901290 41 TACTGTTCCCCCACCTCCTTTGCCTCCAGCCTCCATTGGGA TACTGTTCCCCCACCTCCTTTACCTCCAGCCTCCATTGGGA < 41bp 0.527383367916518 0.879795671234859 0.45730442 0.6473876 prediction 0.70482460663668 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901270 chr10:103901271 synonymous SNV . 0 22 hPsi_associated_SNPs_21593 0 0 1 0 0 Cytosol 0.438718592995102 0.438718592995102 0.2947752 0 hPsi_site_15317 iPseU_CNN:0.2947752;iRNA_PseU:0 15318 chr9 115421835 115421835 1 + G A BLCA 115421834 + 115421814 115421854 41 AGGAGATGTGGCAGGCAGGGTGTCTGGGGGATGACAGCCCT AGGAGATGTGGCAGGCAGGGTATCTGGGGGATGACAGCCCT < 41bp 0.469596656427728 0.852409847145301 0.2938286 0.67393184 prediction 0.704819694290602 Functional Gain - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115421834 chr9:115421835 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21594 0 0 1 0 0 Nucleus 0.438680061672398 0.438717254182896 0.34786368 0 hPsi_site_15318 iPseU_CNN:0.34786368;iRNA_PseU:0 15319 chr11 44076791 44076791 1 + G A rs144678340 44076790 + 44076770 44076810 41 CATAGATGAGATTTACATGCTGTCTGTGTTTGATGAATCCA CATAGATGAGATTTACATGCTATCTGTGTTTGATGAATCCA < 41bp 0.467432180173149 0.852400467016574 0.26931715 0.39010984 prediction 0.704800934033148 Functional Gain - ACCSL ENSG00000205126 CDS Human protein_coding chr11:44076790 chr11:44076791 synonymous SNV . 0 22 hPsi_associated_SNPs_21595 0 0 0 0 2 Exosome 0.43870890054 0.438714162240747 0 0 hPsi_site_15319 iPseU_CNN:0;iRNA_PseU:0 15320 chr16 57003346 57003346 1 + G A SKCM 57003345 + 57003325 57003365 41 CAGCAGCCAGGTGGAGCTGGTGGAAGCCAAGTCCATTGATG CAGCAGCCAGGTGGAGCTGGTAGAAGCCAAGTCCATTGATG < 41bp 0.450115593738408 0.852386493270901 0.31643084 0.68748015 prediction 0.704772986541802 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:57003345 chr16:57003346 synonymous SNV . 0 22 hPsi_associated_SNPs_21596 0 0 0 0 2 exosome 0.438718368981844 0.438718638708189 0.3749603 0 hPsi_site_15320 iPseU_CNN:0.3749603;iRNA_PseU:0 15321 chr7 116339160 116339160 1 + G A UCEC 116339159 + 116339139 116339179 41 ATGAAGGCCCCCGCTGTGCTTGCACCTGGCATCCTCGTGCT ATGAAGGCCCCCGCTGTGCTTACACCTGGCATCCTCGTGCT < 41bp 0.506533739327693 0.858917172842328 0.2546898 0.7193224 prediction 0.70476686702927 Functional Gain - MET ENSG00000105976 CDS Human protein_coding chr7:116339159 chr7:116339160 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_21597 0 0 1 0 0 Cytosol 0.440312326761048 0.442462694561595 0.4386448 0 hPsi_site_15321 iPseU_CNN:0.4386448;iRNA_PseU:0 15322 chrX 99921834 99921834 1 + G A SKCM 99921833 + 99921813 99921853 41 GACAACTATGGTGCCACCTGTGAATACCACTGTGATGGCGG GACAACTATGGTGCCACCTGTAAATACCACTGTGATGGCGG < 41bp 0.453290839022903 0.852381265357809 0.37935647 0.7683412 prediction 0.704762530715619 Functional Gain - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99921833 chrX:99921834 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21598 0 0 0 0 2 nucleus 0.453164172807927 0.439057654156195 0.5366824 0 hPsi_site_15322 iPseU_CNN:0.5366824;iRNA_PseU:0 15323 chr12 122670817 122670817 1 + G A SKCM 122670816 + 122670796 122670836 41 CGCCAATCGAATCAAGGAGGTGGATGCCACCAATCTGCCCC CGCCAATCGAATCAAGGAGGTAGATGCCACCAATCTGCCCC < 41bp 0.451111180281458 0.852378459009544 0.6757809 0.9040055 prediction 0.704756918019088 Functional Gain - LRRC43 ENSG00000158113 CDS Human protein_coding chr12:122670816 chr12:122670817 synonymous SNV . 0 22 hPsi_associated_SNPs_21599 0 0 0 0 2 cytosol 0.438718596785982 0.43871858602248 0.4564492 0 hPsi_site_15323 iPseU_CNN:0.4564492;iRNA_PseU:0 15324 chr11 123894553 123894553 1 + G A rs61908612 123894552 + 123894532 123894572 41 GGCCATTTTCTACACTGTGCTGACACCCCTTCTCAACCCTG GGCCATTTTCTACACTGTGCTAACACCCCTTCTCAACCCTG < 41bp 0.484613404098446 0.852375548820578 0.249214 0.50179875 prediction 0.704751097641156 Functional Gain - OR10G9 ENSG00000236981 CDS Human protein_coding chr11:123894552 chr11:123894553 synonymous SNV . 0 22 hPsi_associated_SNPs_21600 0 0 0 0 0 unknown 0.438719311719983 0.438715852626169 0.00359749999999992 0 hPsi_site_15324 iPseU_CNN:0.00359749999999992;iRNA_PseU:0 15325 chr1 10689678 10689678 1 + G A rs36083022 10689677 + 10689657 10689697 41 ACCCTCCAGCCCTGCGGCCGTGAACCACCACAGCAGCAGCG ACCCTCCAGCCCTGCGGCCGTAAACCACCACAGCAGCAGCG < 41bp 0.464227620656522 0.852373392956759 0.27544543 0.38233888 prediction 0.704746785913518 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689677 chr1:10689678 synonymous SNV . 0 22 hPsi_associated_SNPs_21601 2 0 0 0 1 Ribosome 0.438684177404833 0.43874138695095 0 0 hPsi_site_15325 iPseU_CNN:0;iRNA_PseU:0 15326 chr17 37071324 37071324 1 + G A rs16968526 37071323 + 37071303 37071343 41 GCAGCCCCAGCAGCAGCCGGTGGCCCAGTCCTATGGTGGCT GCAGCCCCAGCAGCAGCCGGTAGCCCAGTCCTATGGTGGCT < 41bp 0.438087039871006 0.852372473123566 0.23133498 0.73738134 prediction 0.704744946247133 Functional Gain - LASP1 ENSG00000002834 CDS Human protein_coding chr17:37071323 chr17:37071324 synonymous SNV . 0 22 hPsi_associated_SNPs_21602 0 0 1 0 2 Cytosol 0.438718615840276 0.438715991980043 0.47476268 0 hPsi_site_15326 iPseU_CNN:0.47476268;iRNA_PseU:0 15327 chr11 375641 375641 1 + G A HNSC 375640 + 375620 375660 41 GGAACTCTTCTGCCCCCAGATGAGTCAGCCTTGAAGATGGA GGAACTCTTCTGCCCCCAGATAAGTCAGCCTTGAAGATGGA < 41bp 0.468918579694842 0.852361563677791 0.25152752 0.50794095 prediction 0.704723127355582 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:375640 chr11:375641 nonsynonymous SNV 0.952 3 22 hPsi_associated_SNPs_21603 0 0 1 0 1 chromatin 0.43871784118777 0.438720554835152 0.0158818999999999 0 hPsi_site_15327 iPseU_CNN:0.0158818999999999;iRNA_PseU:0 15328 chr11 124489568 124489568 1 + G A PRAD 124489567 + 124489547 124489587 41 AAACGACTTTTATCTGTCTATGAGATGCTCCCAGCTTTTGA AAACGACTTTTATCTGTCTATAAGATGCTCCCAGCTTTTGA < 41bp 0.470947936117555 0.852356458004574 0.25455266 0.3801852 prediction 0.704712916009147 Functional Gain - PANX3 ENSG00000154143 CDS Human protein_coding chr11:124489567 chr11:124489568 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21604 0 0 0 0 0 unknown 0.438722190523082 0.438721668638768 0 0 hPsi_site_15328 iPseU_CNN:0;iRNA_PseU:0 15329 chr11 70171018 70171018 1 + G A CESC 70171017 + 70170997 70171037 41 GTCTCTTAGGATGACCGTGGTGAAGAGACAAGCGCAGTCTC GTCTCTTAGGATGACCGTGGTAAAGAGACAAGCGCAGTCTC < 41bp 0.458659854660283 0.852345485089211 0.354717 0.6314455 prediction 0.704690970178421 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70171017 chr11:70171018 synonymous SNV . 0 22 hPsi_associated_SNPs_21605 0 0 1 0 2 Ribosome 0.438718593006937 0.438718603631203 0.262891 0 hPsi_site_15329 iPseU_CNN:0.262891;iRNA_PseU:0 15330 chr16 19498529 19498529 1 + G A SKCM 19498528 + 19498508 19498548 41 TCTTCAGATCAGCCTGATGATGAATTTCCAGCCTCCGAGCA TCTTCAGATCAGCCTGATGATAAATTTCCAGCCTCCGAGCA < 41bp 0.462776358339519 0.852334784309438 0.3243791 0.6245765 prediction 0.704669568618877 Functional Gain - TMC5 ENSG00000103534 CDS Human protein_coding chr16:19498528 chr16:19498529 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21606 0 0 0 0 1 cytosol 0.438718333480934 0.4387185910112 0.249153 0 hPsi_site_15330 iPseU_CNN:0.249153;iRNA_PseU:0 15331 chr14 20216155 20216155 1 + G A rs190796594 20216154 + 20216134 20216174 41 CACAAGTCATCAAGCTGGCCTGCATGGACACCTATGTGGTA CACAAGTCATCAAGCTGGCCTACATGGACACCTATGTGGTA < 41bp 0.482486667970231 0.852326695749361 0.2512269 0.39450312 prediction 0.704653391498723 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216154 chr14:20216155 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21607 0 0 0 0 0 unknown 0.438727560147417 0.438728747246832 0 0 hPsi_site_15331 iPseU_CNN:0;iRNA_PseU:0 15332 chr4 8609047 8609047 1 + G A UCEC 8609046 + 8609026 8609066 41 GATGCAGACCATACCCTTTGTGCTCTCAGCCAGCCTTCATG GATGCAGACCATACCCTTTGTACTCTCAGCCAGCCTTCATG < 41bp 0.534112687540637 0.886429872379669 0.2752855 0.588147 prediction 0.704634369678064 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8609046 chr4:8609047 synonymous SNV . 0 22 hPsi_associated_SNPs_21608 0 0 0 0 1 Endoplasmic reticulum 0.438744750940218 0.438727917325431 0.176294 0 hPsi_site_15332 iPseU_CNN:0.176294;iRNA_PseU:0 15333 chr12 130648143 130648143 1 + G A SKCM 130648142 + 130648122 130648162 41 CGCCCGGCGTGGACGTGTACTGGAGCCGCGAGGACAAGCGC CGCCCGGCGTGGACGTGTACTAGAGCCGCGAGGACAAGCGC < 41bp 0.523465910546118 0.875780019816092 0.28791267 0.8842285 prediction 0.704628218539949 Functional Gain - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130648142 chr12:130648143 stopgain 1.000 0 22 hPsi_associated_SNPs_21609 0 0 0 0 0 exosome 0.482797725259396 0.438734809730489 0.768457 0 hPsi_site_15333 iPseU_CNN:0.768457;iRNA_PseU:0 15334 chr1 235505352 235505352 1 + G A LUSC 235505351 + 235505331 235505371 41 TATTGAAGTGACAGAAATGTTGCATAATGCCAGTTTACTCA TATTGAAGTGACAGAAATGTTACATAATGCCAGTTTACTCA < 41bp 0.504710068973061 0.857007264911466 0.25353098 0.7500723 prediction 0.704594391876811 Functional Gain - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505351 chr1:235505352 synonymous SNV . 0 22 hPsi_associated_SNPs_21610 0 0 1 0 1 Ribosome 0.438733090409783 0.4387038128862 0.5001446 0 hPsi_site_15334 iPseU_CNN:0.5001446;iRNA_PseU:0 15335 chr1 17682535 17682535 1 + G A COAD 17682534 + 17682514 17682554 41 CTTCCTCAGTGCCCAGCAGGTGCAGGCCCCTGTGAAGCTCT CTTCCTCAGTGCCCAGCAGGTACAGGCCCCTGTGAAGCTCT < 41bp 0.464028455918893 0.85229063938045 0.3459556 0.8578319 prediction 0.7045812787609 Functional Gain - PADI4 ENSG00000159339 CDS Human protein_coding chr1:17682534 chr1:17682535 synonymous SNV . 0 22 hPsi_associated_SNPs_21611 0 0 0 0 2 exosome 0.438724538200908 0.438726981394902 0.7156638 0 hPsi_site_15335 iPseU_CNN:0.7156638;iRNA_PseU:0 15336 chr1 228879439 228879439 1 + G A SKCM 228879438 + 228879418 228879458 41 AAGCAGGACTCCAGATAAAATGAAAAACCTCTCCAAGTCCT AAGCAGGACTCCAGATAAAATAAAAAACCTCTCCAAGTCCT < 41bp 0.514007155981601 0.866286590453894 0.27257717 0.29971752 prediction 0.704558868944585 Functional Gain - RHOU ENSG00000116574 CDS Human protein_coding chr1:228879438 chr1:228879439 nonsynonymous SNV 0.967 1 22 hPsi_associated_SNPs_21612 0 0 1 0 0 Ribosome 0.43871859149043 0.438718589703741 0 0 hPsi_site_15336 iPseU_CNN:0;iRNA_PseU:0 15337 chr16 30768255 30768255 1 + G A LUSC 30768254 + 30768234 30768274 41 TGCGGCACCTCATCGACAACTGTGCCTTCCGGCTCTACGGG TGCGGCACCTCATCGACAACTATGCCTTCCGGCTCTACGGG < 41bp 0.450227088106922 0.852273687128263 0.42355886 0.71871144 prediction 0.704547374256527 Functional Gain - PHKG2 ENSG00000156873 CDS Human protein_coding chr16:30768254 chr16:30768255 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21613 0 0 1 0 1 Ribosome 0.437447395971165 0.437182587555338 0.43742288 0 hPsi_site_15337 iPseU_CNN:0.43742288;iRNA_PseU:0 15338 chr2 71191895 71191895 1 + G A COAD 71191894 + 71191874 71191914 41 CTATGCCATCGGGAAGGACGTGCAGGCCATGAAGGCAGTAG CTATGCCATCGGGAAGGACGTACAGGCCATGAAGGCAGTAG < 41bp 0.449174497169535 0.852271364237405 0.2711836 0.58169 prediction 0.704542728474811 Functional Gain - ATP6V1B1 ENSG00000116039 CDS Human protein_coding chr2:71191894 chr2:71191895 synonymous SNV . 0 22 hPsi_associated_SNPs_21614 0 0 0 0 1 Endoplasmic reticulum 0.438758783326951 0.438151185405672 0.16338 0 hPsi_site_15338 iPseU_CNN:0.16338;iRNA_PseU:0 15339 chr5 147821699 147821699 1 + G A BLCA 147821698 + 147821678 147821718 41 AATGGAGAGCCAGTTGAAGATGACTACATTTAATTGGTCCC AATGGAGAGCCAGTTGAAGATAACTACATTTAATTGGTCCC < 41bp 0.517574743795453 0.869845393545874 0.23616269 0.30081487 prediction 0.704541299500843 Functional Gain - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147821698 chr5:147821699 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_21615 0 0 1 0 0 Ribosome 0.438717819849138 0.438734608008138 0 0 hPsi_site_15339 iPseU_CNN:0;iRNA_PseU:0 15340 chr18 28711578 28711578 1 + G A SKCM 28711577 + 28711557 28711597 41 TTCGCCAAGCCGAGGTTGGGTGAAACTCTGCCAGTCCGTGT TTCGCCAAGCCGAGGTTGGGTAAAACTCTGCCAGTCCGTGT < 41bp 0.494163121620042 0.852270299305023 0.39034504 0.7042421 prediction 0.704540598610045 Functional Gain - DSC1 ENSG00000134765 CDS Human protein_coding chr18:28711577 chr18:28711578 synonymous SNV . 0 22 hPsi_associated_SNPs_21616 0 0 0 0 0 exosome 0.438718593027264 0.438718575233859 0.4084842 0 hPsi_site_15340 iPseU_CNN:0.4084842;iRNA_PseU:0 15341 chr10 45869841 45869841 1 + G A SKCM 45869840 + 45869820 45869860 41 CTGCAGCGAGAAGCACCTGCTGGACAAGCCCTTCTACAACG CTGCAGCGAGAAGCACCTGCTAGACAAGCCCTTCTACAACG < 41bp 0.467951264751918 0.852267103445367 0.28003657 0.41887128 prediction 0.704534206890733 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45869840 chr10:45869841 synonymous SNV . 0 22 hPsi_associated_SNPs_21617 0 0 1 0 1 Cytosol 0.438753527348159 0.438698224232105 0 0 hPsi_site_15341 iPseU_CNN:0;iRNA_PseU:0 15342 chr14 78390881 78390881 1 + G A BLCA 78390880 + 78390860 78390900 41 TGCGATCCCCACCCCGGCAATGTACTGGTGCGGAAGCACCC TGCGATCCCCACCCCGGCAATATACTGGTGCGGAAGCACCC < 41bp 0.46925771765527 0.852261576758005 0.14147055 0.21321449 prediction 0.704523153516009 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78390880 chr14:78390881 nonsynonymous SNV 0.980 1 22 hPsi_associated_SNPs_21618 0 0 0 0 1 chromatin 0.438718591638868 0.438718586752887 0 0 hPsi_site_15342 iPseU_CNN:0;iRNA_PseU:0 15343 chr19 17339699 17339699 1 + G A rs116707975 17339698 + 17339678 17339718 41 ACTCAGATCCAGAAATTCGATGACCAAGGAGACAGCGAGGG ACTCAGATCCAGAAATTCGATAACCAAGGAGACAGCGAGGG < 41bp 0.522304266740624 0.874563306821744 0.22819814 0.3936025 prediction 0.704518080162239 Functional Gain - OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17339698 chr19:17339699 nonsynonymous SNV 0.026 1 22 hPsi_associated_SNPs_21619 0 0 0 0 1 membrane 0.438718592995614 0.438718590280206 0 0 hPsi_site_15343 iPseU_CNN:0;iRNA_PseU:0 15344 chr9 138377461 138377461 1 + G A BLCA 138377460 + 138377440 138377480 41 TCCAGCAGCGACGATGGCATTGAGGAGGCCATCCAGCTGTA TCCAGCAGCGACGATGGCATTAAGGAGGCCATCCAGCTGTA < 41bp 0.532431978438319 0.884686819739583 0.28659338 0.5974771 prediction 0.704509682602528 Functional Gain - PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138377460 chr9:138377461 nonsynonymous SNV 0.926 4 22 hPsi_associated_SNPs_21620 0 0 0 0 0 Ribosome 0.438720227599262 0.441755098731041 0.1949542 0 hPsi_site_15344 iPseU_CNN:0.1949542;iRNA_PseU:0 15345 chr9 34655639 34655639 1 + G A HNSC 34655638 + 34655618 34655658 41 GCCAGGCAGGTCCGTGAAGCTGTGTTGTCCTGGAGTGACTG GCCAGGCAGGTCCGTGAAGCTATGTTGTCCTGGAGTGACTG < 41bp 0.452692139731883 0.852249049551811 0.23237038 0.27708796 prediction 0.704498099103623 Functional Gain - IL11RA ENSG00000137070;ENSG00000258728 CDS Human other chr9:34655638 chr9:34655639 synonymous SNV . 0 22 hPsi_associated_SNPs_21621 0 0 1 0 2 Endoplasmic reticulum 0.438386039542048 0.437392454842064 0 0 hPsi_site_15345 iPseU_CNN:0;iRNA_PseU:0 15346 chr21 46380037 46380037 1 + G A rs554932563 46380036 + 46380016 46380056 41 TGCAGAGGCCAAGACCGTTTTGCCCAAGAAGGAGAAAATGA TGCAGAGGCCAAGACCGTTTTACCCAAGAAGGAGAAAATGA < 41bp 0.45540392416243 0.852242488505718 0.23911533 0.5990139 prediction 0.704484977011435 Functional Gain - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46380036 chr21:46380037 synonymous SNV . 0 22 hPsi_associated_SNPs_21622 0 0 0 0 1 Ribosome 0.438718593080175 0.438718592984926 0.1980278 0 hPsi_site_15346 iPseU_CNN:0.1980278;iRNA_PseU:0 15347 chr1 44072574 44072574 1 + G A BLCA 44072573 + 44072553 44072593 41 GGAGCCGGAGATGCTGTGGGTGACGGGTCCCGTGCTGGCAG GGAGCCGGAGATGCTGTGGGTAACGGGTCCCGTGCTGGCAG < 41bp 0.528031781636558 0.880269753763691 0.36653733 0.68746614 prediction 0.704475944254267 Functional Gain - PTPRF ENSG00000142949 CDS Human protein_coding chr1:44072573 chr1:44072574 synonymous SNV . 0 22 hPsi_associated_SNPs_21623 0 0 1 0 2 Ribosome 0.438718592938345 0.438718592995102 0.37493228 0 hPsi_site_15347 iPseU_CNN:0.37493228;iRNA_PseU:0 15348 chr12 7015597 7015597 1 + G A LAML 7015596 + 7015576 7015616 41 CCTGACAGACATCTACTTGCTGCGCTCCTACATCCATCTGC CCTGACAGACATCTACTTGCTACGCTCCTACATCCATCTGC < 41bp 0.529053306127794 0.881286131971312 0.25851482 0.8656669 prediction 0.704465651687036 Functional Gain - LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7015596 chr12:7015597 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21624 0 0 0 0 1 Cytosol 0.438788517305568 0.438719786011849 0.7313338 0 hPsi_site_15348 iPseU_CNN:0.7313338;iRNA_PseU:0 15349 chr10 50870784 50870784 1 + G A LUSC 50870783 + 50870763 50870803 41 CTGCCCGAGATGTTCATGGATGAAACCTACCTGATGAGCAA CTGCCCGAGATGTTCATGGATAAAACCTACCTGATGAGCAA < 41bp 0.534078690941015 0.886310094162827 0.8221494 0.9115203 prediction 0.704462806443624 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50870783 chr10:50870784 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_21625 0 0 0 0 2 unknown 0.438718393394764 0.438718965131487 0.1787418 0 hPsi_site_15349 iPseU_CNN:0.1787418;iRNA_PseU:0 15350 chr5 92924024 92924024 1 + G A UCEC 92924023 + 92924003 92924043 41 CTGCATGCCTCGCCCATGTCTGCCGACCGCGTCGTGGCCTT CTGCATGCCTCGCCCATGTCTACCGACCGCGTCGTGGCCTT < 41bp 0.530814648353735 0.883028253992562 0.24265736 0.37242997 prediction 0.704427211277653 Functional Gain - NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92924023 chr5:92924024 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_21626 0 0 1 0 0 nucleus 0.439955504574324 0.439466319877011 0 0 hPsi_site_15350 iPseU_CNN:0;iRNA_PseU:0 15351 chr11 117984057 117984057 1 + G A ACC 117984056 + 117984036 117984076 41 GGCAGCTTCCCATCCCTGGCTGTGGCCAAGATCATCATCAT GGCAGCTTCCCATCCCTGGCTATGGCCAAGATCATCATCAT < 41bp 0.45249773102059 0.852209774957269 0.27755487 0.6867222 prediction 0.704419549914537 Functional Gain - TMPRSS4 ENSG00000137648 CDS Human protein_coding chr11:117984056 chr11:117984057 nonsynonymous SNV 0.614 3 22 hPsi_associated_SNPs_21627 0 0 0 0 2 Endoplasmic reticulum 0.438718442427276 0.438717471582091 0.3734444 0 hPsi_site_15351 iPseU_CNN:0.3734444;iRNA_PseU:0 15352 chr21 34924550 34924550 1 + G A UCEC 34924549 + 34924529 34924569 41 TCTATGATGATGTCCTATGCTGCAGAACGTTCCATGATGTC TCTATGATGATGTCCTATGCTACAGAACGTTCCATGATGTC < 41bp 0.511263969556028 0.863473555679022 0.5854515 0.87420404 prediction 0.704419172245987 Functional Gain - SON ENSG00000159140 CDS Human protein_coding chr21:34924549 chr21:34924550 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21628 0 0 1 0 0 Nucleus 0.437818821493568 0.438567449534924 0.57750508 0 hPsi_site_15352 iPseU_CNN:0.57750508;iRNA_PseU:0 15353 chr1 22986100 22986100 1 + G A UCEC 22986099 + 22986079 22986119 41 CCTGGGACACCTGGCCCCGATGGCCAACCTGGGACCCCAGG CCTGGGACACCTGGCCCCGATAGCCAACCTGGGACCCCAGG < 41bp 0.469247961503353 0.852197920611889 0.2522974 0.33802822 prediction 0.704395841223777 Functional Gain - C1QB ENSG00000173369 CDS Human protein_coding chr1:22986099 chr1:22986100 nonsynonymous SNV 0.454 5 22 hPsi_associated_SNPs_21629 0 0 0 0 1 exosome 0.438718592991739 0.438718592995102 0 0 hPsi_site_15353 iPseU_CNN:0;iRNA_PseU:0 15354 chr3 10320676 10320676 1 + G A STAD 10320675 + 10320655 10320695 41 CTCCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCC CTCCCTCACCTTGGCTGCCTTACGTGAGAACACCAGTCGCC < 41bp 0.455324729790424 0.852190890823361 0.24199155 0.65502125 prediction 0.704381781646721 Functional Gain - TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320675 chr3:10320676 synonymous SNV . 0 22 hPsi_associated_SNPs_21630 0 0 1 0 2 Cytosol 0.438718685181573 0.438740213392741 0.3100425 0 hPsi_site_15354 iPseU_CNN:0.3100425;iRNA_PseU:0 15355 chr11 48286167 48286167 1 + G A LUSC 48286166 + 48286146 48286186 41 TCGACCTGTTCTTCATACCTTGCTCCTTGGTCTATATTAGG TCGACCTGTTCTTCATACCTTACTCCTTGGTCTATATTAGG < 41bp 0.491169281853208 0.852188579911536 0.19727755 0.33142358 prediction 0.704377159823072 Functional Gain - OR4X1 ENSG00000176567 CDS Human protein_coding chr11:48286166 chr11:48286167 nonsynonymous SNV 0.979 3 22 hPsi_associated_SNPs_21631 0 0 0 0 0 unknown 0.438718046150204 0.438712358125948 0 0 hPsi_site_15355 iPseU_CNN:0;iRNA_PseU:0 15356 chr1 55474030 55474030 1 + G A UCEC 55474029 + 55474009 55474049 41 CACAACAGGAACCTCAGGGCTGCAGGTGCCCGCTGGACCGC CACAACAGGAACCTCAGGGCTACAGGTGCCCGCTGGACCGC < 41bp 0.529085090902945 0.881269015841922 0.3057866 0.6557456 prediction 0.704367849877953 Functional Gain - BSND ENSG00000162399 CDS Human protein_coding chr1:55474029 chr1:55474030 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21632 0 0 0 0 0 unknown 0.438718380278521 0.438718557641729 0.3114912 0 hPsi_site_15356 iPseU_CNN:0.3114912;iRNA_PseU:0 15357 chr1 112309284 112309284 1 + G A HNSC 112309283 + 112309263 112309303 41 CAGGCGGTCTTCCTTCAGATTGCAGACTGAAGCCCAGGAAG CAGGCGGTCTTCCTTCAGATTACAGACTGAAGCCCAGGAAG < 41bp 0.519307150765166 0.871490329615536 0.24576709 0.3128294 prediction 0.70436635770074 Functional Gain - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112309283 chr1:112309284 synonymous SNV . 0 22 hPsi_associated_SNPs_21633 0 0 1 0 0 Ribosome 0.438380148988282 0.438632179610177 0 0 hPsi_site_15357 iPseU_CNN:0;iRNA_PseU:0 15358 chr11 71907018 71907018 1 + G A OV 71907017 + 71906997 71907037 41 ACACCCACTGTTCTGTGCAATGAAATCTGGACTCACTCCTA ACACCCACTGTTCTGTGCAATAAAATCTGGACTCACTCCTA < 41bp 0.45979849623154 0.852179055122549 0.24263069 0.2555722 prediction 0.704358110245098 Functional Gain - FOLR1 ENSG00000110195 CDS Human protein_coding chr11:71907017 chr11:71907018 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_21634 0 0 0 0 0 Endoplasmic reticulum 0.438717703015095 0.438720777608547 0 0 hPsi_site_15358 iPseU_CNN:0;iRNA_PseU:0 15359 chr8 38934858 38934858 1 + G A LGG 38934857 + 38934837 38934877 41 AGGCACCAAATGTTGGGGTGTGGATTTCCAGCTAGGATCAG AGGCACCAAATGTTGGGGTGTAGATTTCCAGCTAGGATCAG < 41bp 0.468796110435016 0.852173461809603 0.2665823 0.3509395 prediction 0.704346923619206 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38934857 chr8:38934858 synonymous SNV . 0 22 hPsi_associated_SNPs_21635 0 0 1 0 1 Ribosome 0.438718598010469 0.438718557929969 0 0 hPsi_site_15359 iPseU_CNN:0;iRNA_PseU:0 15360 chr8 126369986 126369986 1 + G A SKCM 126369985 + 126369965 126370005 41 GAAGCCAGTGAAAAATAAAGTGTGTGGCCACACCTATGAAG GAAGCCAGTGAAAAATAAAGTATGTGGCCACACCTATGAAG < 41bp 0.470730459051681 0.852172496309339 0.4646874 0.6186746 prediction 0.704344992618677 Functional Gain - NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126369985 chr8:126369986 synonymous SNV . 0 22 hPsi_associated_SNPs_21636 0 0 1 0 2 Cytosol 0.438718573632065 0.438718452837739 0.2373492 0 hPsi_site_15360 iPseU_CNN:0.2373492;iRNA_PseU:0 15361 chr2 37471080 37471080 1 + G A SKCM 37471079 + 37471059 37471099 41 TGATAAACTGAGGTTTGTTTTGGCACCTTCTGCCACCCCAG TGATAAACTGAGGTTTGTTTTAGCACCTTCTGCCACCCCAG < 41bp 0.53560711869325 0.887769433334032 0.32178795 0.36047253 prediction 0.704324629281565 Functional Gain - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37471079 chr2:37471080 synonymous SNV . 0 22 hPsi_associated_SNPs_21637 0 0 1 2 2 chromatin 0.438718581290886 0.438702831060836 0 0 hPsi_site_15361 iPseU_CNN:0;iRNA_PseU:0 15362 chr3 189582057 189582057 1 + G A UCEC 189582056 + 189582036 189582076 41 AAGAAACTCTACTGCCAAATTGCAAAGACATGCCCCATCCA AAGAAACTCTACTGCCAAATTACAAAGACATGCCCCATCCA < 41bp 0.471980747440017 0.85215877866814 0.31163707 0.60737693 prediction 0.70431755733628 Functional Gain - TP63 ENSG00000073282 CDS Human protein_coding chr3:189582056 chr3:189582057 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_21638 0 0 0 0 1 chromatin 0.438718303671337 0.438722843988912 0.21475386 0 hPsi_site_15362 iPseU_CNN:0.21475386;iRNA_PseU:0 15363 chr20 43379218 43379218 1 + G A LUAD 43379217 + 43379197 43379237 41 CTTCCTCAACCTGGTGGTCCTGCGCTTCCTCGTTGCCAGCG CTTCCTCAACCTGGTGGTCCTACGCTTCCTCGTTGCCAGCG < 41bp 0.523995939557795 0.876151530578355 0.4003422 0.8459972 prediction 0.704311182041121 Functional Gain - KCNK15 ENSG00000124249 CDS Human protein_coding chr20:43379217 chr20:43379218 synonymous SNV . 0 22 hPsi_associated_SNPs_21639 0 0 0 0 0 Nucleus 0.438759222114943 0.438825671833239 0.6919944 0 hPsi_site_15363 iPseU_CNN:0.6919944;iRNA_PseU:0 15364 chr9 102595604 102595604 1 + G A PAAD 102595603 + 102595583 102595623 41 GAAAGGGAGGAGAGGTCGTCTGCCTTCCAAACCAAAGAGCC GAAAGGGAGGAGAGGTCGTCTACCTTCCAAACCAAAGAGCC < 41bp 0.539537052909496 0.891685154201045 0.22681203 0.40011844 prediction 0.704296202583098 Functional Gain - NR4A3 ENSG00000119508 CDS Human protein_coding chr9:102595603 chr9:102595604 synonymous SNV . 0 22 hPsi_associated_SNPs_21640 0 0 1 0 1 Cytosol 0.438718546474046 0.438718045139595 0 0 hPsi_site_15364 iPseU_CNN:0;iRNA_PseU:0 15365 chr17 4645675 4645675 1 + G A LUSC 4645674 + 4645654 4645694 41 GGAGAGGCTTGTCTCCGGGCTGACTGGCAGCGGTGCCCAGA GGAGAGGCTTGTCTCCGGGCTAACTGGCAGCGGTGCCCAGA < 41bp 0.539014833167187 0.891160141241907 0.15063402 0.37635556 prediction 0.704290616149441 Functional Gain - ZMYND15 ENSG00000141497 CDS Human protein_coding chr17:4645674 chr17:4645675 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_21641 0 0 0 0 1 Cytosol 0.438718592995102 0.438718592995289 0 0 hPsi_site_15365 iPseU_CNN:0;iRNA_PseU:0 15366 chr15 23811668 23811668 1 + G A LUAD 23811667 + 23811647 23811687 41 GGGTTGCGGTTTTGCTATTATGCTTCCAGGGGAGTTTGCTT GGGTTGCGGTTTTGCTATTATACTTCCAGGGGAGTTTGCTT < 41bp 0.470430639422689 0.852140839326199 0.2759086 0.48015416 prediction 0.704281678652398 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811667 chr15:23811668 nonsynonymous SNV 0.012 3 22 hPsi_associated_SNPs_21642 0 0 1 0 0 chromatin 0.438717517148575 0.438718496046134 0 0 hPsi_site_15366 iPseU_CNN:0;iRNA_PseU:0 15367 chr19 50100458 50100458 1 + G A COAD 50100457 + 50100437 50100477 41 ACCATGGAGGAGATGTTCGGTGGAGGGGCCGCGGACGACTA ACCATGGAGGAGATGTTCGGTAGAGGGGCCGCGGACGACTA < 41bp 0.519964265033723 0.872097813103458 0.33499742 0.60896355 prediction 0.704267096139471 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50100457 chr19:50100458 nonsynonymous SNV 0.711 2 22 hPsi_associated_SNPs_21643 0 0 1 0 0 Exosome 0.438716954483113 0.438718586985198 0.2179271 0 hPsi_site_15367 iPseU_CNN:0.2179271;iRNA_PseU:0 15368 chr11 60699489 60699489 1 + G A SKCM 60699488 + 60699468 60699508 41 GTGAATACAGCACCACTGACTGGAGTGCCCCAGCATGTCCC GTGAATACAGCACCACTGACTAGAGTGCCCCAGCATGTCCC < 41bp 0.525037598787979 0.877170048816537 0.23942679 0.3514086 prediction 0.704264900057117 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60699488 chr11:60699489 nonsynonymous SNV 0.952 4 22 hPsi_associated_SNPs_21644 0 0 0 0 1 Ribosome 0.438718655063417 0.43871909664671 0 0 hPsi_site_15368 iPseU_CNN:0;iRNA_PseU:0 15369 chr19 55019321 55019321 1 + G A BRCA 55019320 + 55019300 55019340 41 GACTCAGTAAGTGAAGGAAATGCCGGGCTTTATCGCTGCCT GACTCAGTAAGTGAAGGAAATACCGGGCTTTATCGCTGCCT < 41bp 0.520877372186161 0.873009778377273 0.25094512 0.46662033 prediction 0.704264812382224 Functional Gain - LAIR2 ENSG00000167618 CDS Human protein_coding chr19:55019320 chr19:55019321 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_21645 0 0 0 0 0 exosome 0.438718763939259 0.438717844888886 0 0 hPsi_site_15369 iPseU_CNN:0;iRNA_PseU:0 15370 chr2 103013143 103013143 1 + G A COAD 103013142 + 103013122 103013162 41 AAAATTAAAATAATCTTAATTGAATTTACACCTGTTACTGA AAAATTAAAATAATCTTAATTAAATTTACACCTGTTACTGA < 41bp 0.488410331869672 0.852123583479451 0.16523555 0.22062293 prediction 0.704247166958902 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:103013142 chr2:103013143 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_21646 0 0 0 0 0 Nucleus 0.438722365229377 0.438720525553754 0 0 hPsi_site_15370 iPseU_CNN:0;iRNA_PseU:0 15371 chr7 150699032 150699032 1 + C A GBM 150699031 + 150699011 150699051 41 ACAGCAGCTGGGGAGACTCTTCCGGAAGGCTTTTGATCCCC ACAGCAGCTGGGGAGACTCTTACGGAAGGCTTTTGATCCCC < 41bp 0.498954828172873 0.852120854862327 0.36463147 0.6346132 prediction 0.704241709724653 Functional Gain - NOS3 ENSG00000164867 CDS Human protein_coding chr7:150699031 chr7:150699032 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21647 0 0 0 0 1 chromatin 0.438718592956745 0.438718593061909 0.2692264 0 hPsi_site_15371 iPseU_CNN:0.2692264;iRNA_PseU:0 15372 chr9 138378029 138378029 1 + G A LGG 138378028 + 138378008 138378048 41 TGCTGGCCAGAGGTGAGAGCTGCCCGCAGGCTGCCCAGGGT TGCTGGCCAGAGGTGAGAGCTACCCGCAGGCTGCCCAGGGT < 41bp 0.473717548376213 0.852116297321137 0.22619256 0.48192897 prediction 0.704232594642274 Functional Gain - PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378028 chr9:138378029 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_21648 0 0 1 0 0 Ribosome 0.43871937109482 0.438725047216582 0 0 hPsi_site_15372 iPseU_CNN:0;iRNA_PseU:0 15373 chr12 81101547 81101547 1 + G A SKCM 81101546 + 81101526 81101566 41 TCCTATTTCTTCTACTTGGATGGGGAAAATGTTACTCTGCA TCCTATTTCTTCTACTTGGATAGGGAAAATGTTACTCTGCA < 41bp 0.4828192733732 0.852094203104119 0.24642545 0.5039067 prediction 0.704188406208238 Functional Gain - MYF6 ENSG00000111046 CDS Human protein_coding chr12:81101546 chr12:81101547 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21649 0 0 0 0 0 unknown 0.438718593456372 0.438718594645918 0.00781340000000008 0 hPsi_site_15373 iPseU_CNN:0.00781340000000008;iRNA_PseU:0 15374 chr6 47682551 47682551 1 + G A SARC 47682550 + 47682530 47682570 41 ATTGGCTTTGCCATTGGCTATGGGTGCCCATTGATCATTGC ATTGGCTTTGCCATTGGCTATAGGTGCCCATTGATCATTGC < 41bp 0.458822413520475 0.852074183268875 0.21902555 0.4222639 prediction 0.704148366537751 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47682550 chr6:47682551 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_21650 0 0 0 0 0 exosome 0.439279952229268 0.438718637101233 0 0 hPsi_site_15374 iPseU_CNN:0;iRNA_PseU:0 15375 chr21 46396679 46396679 1 + G A LIHC 46396678 + 46396658 46396698 41 GGTGGCCATCGGGCAGACGCTGGCCCGGCAGATGCAGCTGG GGTGGCCATCGGGCAGACGCTAGCCCGGCAGATGCAGCTGG < 41bp 0.516092613291797 0.868166729517827 0.2831064 0.71343756 prediction 0.70414823245206 Functional Gain - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46396678 chr21:46396679 synonymous SNV . 0 22 hPsi_associated_SNPs_21651 0 0 1 0 1 Ribosome 0.438717025248134 0.438468438853689 0.42687512 0 hPsi_site_15375 iPseU_CNN:0.42687512;iRNA_PseU:0 15376 chr12 69747030 69747030 1 + G A STAD 69747029 + 69747009 69747049 41 TTTCCTTCTTCAGCTCATTTTGTCTCTCTCACATTAAGGGA TTTCCTTCTTCAGCTCATTTTATCTCTCTCACATTAAGGGA < 41bp 0.489998581313811 0.852062908685044 0.22126016 0.25626338 prediction 0.704125817370089 Functional Gain - LYZ ENSG00000090382 CDS Human protein_coding chr12:69747029 chr12:69747030 synonymous SNV . 0 22 hPsi_associated_SNPs_21652 0 0 1 0 0 Endoplasmic reticulum 0.437975269275048 0.438812996062946 0 0 hPsi_site_15376 iPseU_CNN:0;iRNA_PseU:0 15377 chr2 27306459 27306459 1 + G A GBM 27306458 + 27306438 27306478 41 ACTGTGGAGGGCCAGGGCGCTGATCTGGCTGACCTGGGGGC ACTGTGGAGGGCCAGGGCGCTAATCTGGCTGACCTGGGGGC < 41bp 0.46375298682129 0.85206008561986 0.2591303 0.7318924 prediction 0.70412017123972 Functional Gain - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27306458 chr2:27306459 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_21653 0 0 1 0 0 Cytosol 0.4386800052156 0.424829169221668 0.4637848 0 hPsi_site_15377 iPseU_CNN:0.4637848;iRNA_PseU:0 15378 chr5 6668915 6668915 1 + G A rs1042150 6668914 + 6668894 6668934 41 CCTTCGTGTCAGGTGCTGTGTGTAAGTGGAGAACTTGGGGA CCTTCGTGTCAGGTGCTGTGTATAAGTGGAGAACTTGGGGA < 41bp 0.475237041814414 0.852052966814346 0.26354092 0.37745017 prediction 0.704105933628691 Functional Gain - SRD5A1 ENSG00000145545 UTR3 Human protein_coding chr5:6668914 chr5:6668915 . . 0 22 hPsi_associated_SNPs_21654 0 0 1 0 0 Ribosome 0.43877783294806 0.438849429809951 0 0 hPsi_site_15378 iPseU_CNN:0;iRNA_PseU:0 15379 chr19 50027855 50027855 1 + G A UCEC 50027854 + 50027834 50027874 41 CTCCTTCTACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGA CTCCTTCTACCCTCCGGAGCTACAACTTCGGTTCCTGCGGA < 41bp 0.531978631224533 0.884014623600734 0.3727798 0.4415282 prediction 0.704071984752401 Functional Gain - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027854 chr19:50027855 synonymous SNV . 0 22 hPsi_associated_SNPs_21655 0 0 1 1 1 Endoplasmic reticulum 0.438719390843334 0.438718588433731 0 0 hPsi_site_15379 iPseU_CNN:0;iRNA_PseU:0 15380 chr3 52824808 52824808 1 + G A LAML 52824807 + 52824787 52824827 41 AAGAGGAACCTGGTGGTGTCTGTGGACGACGGTGGCACCTT AAGAGGAACCTGGTGGTGTCTATGGACGACGGTGGCACCTT < 41bp 0.456719048465804 0.852030977269044 0.25956416 0.3172688 prediction 0.704061954538088 Functional Gain - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52824807 chr3:52824808 nonsynonymous SNV 0.609 0 22 hPsi_associated_SNPs_21656 0 0 0 0 0 Endoplasmic reticulum 0.438718593022091 0.43871859298007 0 0 hPsi_site_15380 iPseU_CNN:0;iRNA_PseU:0 15381 chr3 10191492 10191492 1 + G A KIRC 10191491 + 10191471 10191511 41 TGTATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGC TGTATACTCTGAAAGAGCGATACCTCCAGGTTGTCCGGAGC < 41bp 0.524670974823936 0.876695200517643 0.19184 0.37581277 prediction 0.704048451387415 Functional Gain - VHL ENSG00000134086 CDS Human protein_coding chr3:10191491 chr3:10191492 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21657 1 0 1 0 0 Ribosome 0.438716387723242 0.43871435374234 0 0 hPsi_site_15381 iPseU_CNN:0;iRNA_PseU:0 15382 chr16 89220540 89220540 1 + G A BLCA 89220539 + 89220519 89220559 41 GGTGCCCTCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGA GGTGCCCTCGGAGCTGGTGCTAGTGGAGGAGATCCCGCGGA < 41bp 0.466011816152202 0.852021699113573 0.2411753 0.46555445 prediction 0.704043398227146 Functional Gain - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89220539 chr16:89220540 synonymous SNV . 0 22 hPsi_associated_SNPs_21658 0 0 1 0 1 chromatin 0.438728688240217 0.438718539170807 0 0 hPsi_site_15382 iPseU_CNN:0;iRNA_PseU:0 15383 chr5 33467748 33467748 1 + G A ESCA 33467747 + 33467727 33467767 41 CACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCTACA CACGGGGAACGCACCATTTCTAAAACTATCGAGCGGCTACA < 41bp 0.469341378294437 0.852016832916577 0.28181663 0.5351244 prediction 0.704033665833154 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33467747 chr5:33467748 nonsynonymous SNV 0.054 2 22 hPsi_associated_SNPs_21659 0 0 1 0 1 Nucleus 0.438633581248363 0.438869940371553 0.0702487999999999 0 hPsi_site_15383 iPseU_CNN:0.0702487999999999;iRNA_PseU:0 15384 chr15 91312742 91312742 1 + G A LUAD 91312741 + 91312721 91312761 41 GTTTCCTTCTGTTCCGGTGATGGCTCTTACGGCCACAGCTA GTTTCCTTCTGTTCCGGTGATAGCTCTTACGGCCACAGCTA < 41bp 0.456095221179546 0.852007793263758 0.20010796 0.40428483 prediction 0.704015586527515 Functional Gain - BLM ENSG00000197299 CDS Human protein_coding chr15:91312741 chr15:91312742 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_21660 0 0 1 0 2 Ribosome 0.438734674344266 0.438729045958262 0 0 hPsi_site_15384 iPseU_CNN:0;iRNA_PseU:0 15385 chr17 29182287 29182287 1 + G A STAD 29182286 + 29182266 29182306 41 GAAAGCTGCTGCGCTGGATGTGTACAATGCAGTGAGTACCA GAAAGCTGCTGCGCTGGATGTATACAATGCAGTGAGTACCA < 41bp 0.46437887000072 0.8519898382316 0.4406352 0.65532106 prediction 0.7039796764632 Functional Gain - ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29182286 chr17:29182287 synonymous SNV . 0 22 hPsi_associated_SNPs_21661 0 0 1 0 1 chromatin 0.431427473148351 0.435736395915222 0.31064212 0 hPsi_site_15385 iPseU_CNN:0.31064212;iRNA_PseU:0 15386 chr12 54367605 54367605 1 + G A BLCA 54367604 + 54367584 54367624 41 TCGGGACTGGCGTCCCGGGCTGAGGCGGGTGCCGAGGCGGA TCGGGACTGGCGTCCCGGGCTAAGGCGGGTGCCGAGGCGGA < 41bp 0.474845066653215 0.851989676808767 0.21490148 0.5383122 prediction 0.703979353617534 Functional Gain - HOXC11 ENSG00000123388 CDS Human protein_coding chr12:54367604 chr12:54367605 nonsynonymous SNV 0.611 1 22 hPsi_associated_SNPs_21662 0 0 0 0 0 exosome 0.438653556119734 0.438718724157908 0.0766244 0 hPsi_site_15386 iPseU_CNN:0.0766244;iRNA_PseU:0 15387 chr13 88328753 88328753 1 + G A STAD 88328752 + 88328732 88328772 41 CTATCAGACCAAATCCCCGGTGCCTTTGGAGTGTCCCACCG CTATCAGACCAAATCCCCGGTACCTTTGGAGTGTCCCACCG < 41bp 0.53405630632025 0.886041143675883 0.29064053 0.72764236 prediction 0.703969674711266 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328752 chr13:88328753 synonymous SNV . 0 22 hPsi_associated_SNPs_21663 0 0 1 0 0 nucleus 0.438718601271148 0.438719731172965 0.45528472 0 hPsi_site_15387 iPseU_CNN:0.45528472;iRNA_PseU:0 15388 chr17 7606715 7606715 1 + G A rs146634933 7606714 + 7606694 7606734 41 CGGCTTCAGCTCTGGTGGTGTGGGGGGGCGCCAGACTCCAG CGGCTTCAGCTCTGGTGGTGTAGGGGGGCGCCAGACTCCAG < 41bp 0.47203647642085 0.851982575447517 0.2223503 0.59988517 prediction 0.703965150895034 Functional Gain - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606714 chr17:7606715 nonsynonymous SNV 0.928 3 22 hPsi_associated_SNPs_21664 0 0 0 0 0 Ribosome 0.438718624724033 0.438730072879888 0.19977034 0 hPsi_site_15388 iPseU_CNN:0.19977034;iRNA_PseU:0 15389 chr17 3560038 3560038 1 + G A UCEC 3560037 + 3560017 3560057 41 CAACGACGTCTTCTTCAGCCTGCACGCGGTTGTCCTCACGC CAACGACGTCTTCTTCAGCCTACACGCGGTTGTCCTCACGC < 41bp 0.448404249303037 0.851982170692159 0.21911418 0.33153403 prediction 0.703964341384318 Functional Gain - CTNS ENSG00000040531 CDS Human protein_coding chr17:3560037 chr17:3560038 synonymous SNV . 0 22 hPsi_associated_SNPs_21665 0 0 0 0 2 Endoplasmic reticulum 0.438719002603174 0.438728098876624 0 0 hPsi_site_15389 iPseU_CNN:0;iRNA_PseU:0 15390 chr11 120989283 120989283 1 + G A LUAD 120989282 + 120989262 120989302 41 CTTGCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCCTT CTTGCTGGCCCGACAGTGTTTACAGACTTCCAGCCTCCCTT < 41bp 0.536277937915247 0.888245760576301 0.26254943 0.3327673 prediction 0.703935645322108 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:120989282 chr11:120989283 synonymous SNV . 0 22 hPsi_associated_SNPs_21666 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_15390 iPseU_CNN:0;iRNA_PseU:0 15391 chr16 30002472 30002472 1 + G A SARC 30002471 + 30002451 30002491 41 GGCCTTCGATGCGGAAAGCATGAGGCTGGGCTTCTCCAGCA GGCCTTCGATGCGGAAAGCATAAGGCTGGGCTTCTCCAGCA < 41bp 0.518411294437328 0.870376162454005 0.29216665 0.35937512 prediction 0.703929736033355 Functional Gain - TAOK2 ENSG00000149930 CDS Human protein_coding chr16:30002471 chr16:30002472 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21667 0 0 0 0 0 Nucleus 0.438718589061716 0.438718551580519 0 0 hPsi_site_15391 iPseU_CNN:0;iRNA_PseU:0 15392 chrX 37028256 37028256 1 + G A COAD 37028255 + 37028235 37028275 41 AGAGCCTCCCAAGACTCGGGTGTCCAGTCTCCCCCCGGAGC AGAGCCTCCCAAGACTCGGGTATCCAGTCTCCCCCCGGAGC < 41bp 0.524549796177097 0.876514417347609 0.3897676 0.62492144 prediction 0.703929242341023 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37028255 chrX:37028256 synonymous SNV . 0 22 hPsi_associated_SNPs_21668 0 0 0 0 0 unknown 0.438718592995098 0.438718592995072 0.24984288 0 hPsi_site_15392 iPseU_CNN:0.24984288;iRNA_PseU:0 15393 chr19 37966838 37966838 1 + G A STAD 37966837 + 37966817 37966857 41 TCTCCCAAGAGGAATGGGATTGTCTGGATTCTTCTCAAAGA TCTCCCAAGAGGAATGGGATTATCTGGATTCTTCTCAAAGA < 41bp 0.532322682252533 0.884285800378954 0.26327854 0.43864423 prediction 0.703926236252841 Functional Gain - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37966837 chr19:37966838 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_21669 0 0 1 0 2 exosome 0.438749636386899 0.438704695692887 0 0 hPsi_site_15393 iPseU_CNN:0;iRNA_PseU:0 15394 chr5 55195898 55195898 1 + C A BLCA 55195897 + 55195877 55195917 41 GCTTTTGGGTGTCTATGATTTCTTATAATTCTCTTGGGAAG GCTTTTGGGTGTCTATGATTTATTATAATTCTCTTGGGAAG < 41bp 0.498133618606683 0.851956611169518 0.26934385 0.47680402 prediction 0.703913222339036 Functional Gain - IL31RA ENSG00000164509 CDS Human protein_coding chr5:55195897 chr5:55195898 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_21670 0 0 0 0 1 exosome 0.438718592992954 0.438718592995173 0 0 hPsi_site_15394 iPseU_CNN:0;iRNA_PseU:0 15395 chr1 42880340 42880340 1 + G A STAD 42880339 + 42880319 42880359 41 GACCAGGCATGCAACTTAGATGTGGGTGGGATCATTGCAGA GACCAGGCATGCAACTTAGATATGGGTGGGATCATTGCAGA < 41bp 0.474354656444017 0.851949843898089 0.26130787 0.42749888 prediction 0.703899687796179 Functional Gain - RIMKLA ENSG00000177181 CDS Human protein_coding chr1:42880339 chr1:42880340 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21671 0 0 0 0 0 Ribosome 0.438718538135268 0.438718523709459 0 0 hPsi_site_15395 iPseU_CNN:0;iRNA_PseU:0 15396 chr6 36259126 36259126 1 + G A rs572438037 36259125 + 36259105 36259145 41 CTCAGAGTCCTCAACGTGGGTGTGGCCGAGGTGAAGAAATC CTCAGAGTCCTCAACGTGGGTATGGCCGAGGTGAAGAAATC < 41bp 0.454294837201068 0.851931275686022 0.15763223 0.346896 prediction 0.703862551372043 Functional Gain - PNPLA1 ENSG00000180316 CDS Human protein_coding chr6:36259125 chr6:36259126 nonsynonymous SNV 0.937 1 22 hPsi_associated_SNPs_21672 1 0 0 0 1 exosome 0.438718591963258 0.438718584509648 0 0 hPsi_site_15396 iPseU_CNN:0;iRNA_PseU:0 15397 chr7 66104370 66104370 1 + G A rs113446781 66104369 + 66104349 66104389 41 CAGCTCCCAGGGGACAGAGGTGTAGCTCCAATCTCCCTGAC CAGCTCCCAGGGGACAGAGGTATAGCTCCAATCTCCCTGAC < 41bp 0.518368388077816 0.870293687352114 0.77421266 0.91553736 prediction 0.703850598548596 Functional Gain - KCTD7 ENSG00000243335 UTR3 Human protein_coding chr7:66104369 chr7:66104370 . . 0 22 hPsi_associated_SNPs_21673 0 0 1 0 0 nucleus 0.438718592782549 0.438718593173646 0.2826494 0 hPsi_site_15397 iPseU_CNN:0.2826494;iRNA_PseU:0 15398 chr17 8218749 8218749 1 + G A rs8067778 8218748 + 8218728 8218768 41 CTAGAGTCTTTTCGAGGTGGTGACGTCCGAGGCTTCCTACC CTAGAGTCTTTTCGAGGTGGTAACGTCCGAGGCTTCCTACC < 41bp 0.545689622058834 0.8976143925218 0.35680756 0.88227254 prediction 0.703849540925932 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8218748 chr17:8218749 synonymous SNV . 0 22 hPsi_associated_SNPs_21674 1 0 0 0 0 exosome 0.438715462770129 0.438720218427894 0.76454508 0 hPsi_site_15398 iPseU_CNN:0.76454508;iRNA_PseU:0 15399 chr21 47361608 47361608 1 + G A rs202074753 47361607 + 47361587 47361627 41 GACGTCCGAGGTCACCGGGATGGGCACGCTGTAATCCTACC GACGTCCGAGGTCACCGGGATAGGCACGCTGTAATCCTACC < 41bp 0.522959059570641 0.874882800437649 0.5651891 0.78216887 prediction 0.703847481734016 Functional Gain - PCBP3 ENSG00000183570 CDS Human protein_coding chr21:47361607 chr21:47361608 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_21675 0 0 0 0 1 nucleoplasm 0.4387185929693 0.438720083655456 0.43395954 0 hPsi_site_15399 iPseU_CNN:0.43395954;iRNA_PseU:0 15400 chr20 62562306 62562306 1 + G A HNSC 62562305 + 62562285 62562325 41 AAGTGTAAGCCCAAGGCGCCTGAAGGCGAGGAGACGGAGTT AAGTGTAAGCCCAAGGCGCCTAAAGGCGAGGAGACGGAGTT < 41bp 0.521733195325208 0.873647624140642 0.21883354 0.26465932 prediction 0.703828857630868 Functional Gain - DNAJC5 ENSG00000101152 CDS Human protein_coding chr20:62562305 chr20:62562306 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_21676 0 0 1 0 1 Ribosome 0.438720543689786 0.438718759677689 0 0 hPsi_site_15400 iPseU_CNN:0;iRNA_PseU:0 15401 chr21 43829594 43829594 1 + C A LGG 43829593 + 43829573 43829613 41 CCCCCAGGAGTATGCCCTTTTCCTCTGTCCAACGGGGCCCC CCCCCAGGAGTATGCCCTTTTACTCTGTCCAACGGGGCCCC < 41bp 0.496652606743371 0.851913847873834 0.26391357 0.43538767 prediction 0.703827695747669 Functional Gain - UBASH3A ENSG00000160185 CDS Human protein_coding chr21:43829593 chr21:43829594 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_21677 0 0 0 0 1 exosome 0.438718226426736 0.438718776409751 0 0 hPsi_site_15401 iPseU_CNN:0;iRNA_PseU:0 15402 chr1 23406069 23406069 1 + G A OV 23406068 + 23406048 23406088 41 GGTGTTGTGTTTTGATCGGGTGTTCTGGGATCCAAGTGTCA GGTGTTGTGTTTTGATCGGGTATTCTGGGATCCAAGTGTCA < 41bp 0.461636020307755 0.851909506583975 0.3281884 0.6558107 prediction 0.703819013167951 Functional Gain - KDM1A ENSG00000004487 CDS Human protein_coding chr1:23406068 chr1:23406069 synonymous SNV . 0 22 hPsi_associated_SNPs_21678 0 0 1 0 2 Cytosol 0.439170468311385 0.439201148216538 0.3116214 0 hPsi_site_15402 iPseU_CNN:0.3116214;iRNA_PseU:0 15403 chr16 32077622 32077622 1 + G A LUAD 32077621 + 32077601 32077641 41 GGACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCC GGACAACGCCAAGAACTCACTATATCTGCAAATGAACAGCC < 41bp 0.481402713545482 0.851899844017784 0.2655503 0.32170728 prediction 0.703799688035567 Functional Gain - ZNF267;LOC102723753 ENSG00000270472 CDS Human IG_V_gene chr16:32077621 chr16:32077622 synonymous SNV . 0 22 hPsi_associated_SNPs_21679 0 0 0 0 1 unknown 0.439378465723852 0.438837382584837 0 0 hPsi_site_15403 iPseU_CNN:0;iRNA_PseU:0 15404 chr10 7776944 7776944 1 + C A LUAD 7776943 + 7776923 7776963 41 CAAGATCGATCCTGCAGATGTCTCTAGACCACCACATTGTG CAAGATCGATCCTGCAGATGTATCTAGACCACCACATTGTG < 41bp 0.503869072492066 0.855763716998734 0.3511074 0.5493104 prediction 0.703789289013337 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7776943 chr10:7776944 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_21680 0 0 0 0 1 cytosol 0.438386009595885 0.438686708648652 0.0986208 0 hPsi_site_15404 iPseU_CNN:0.0986208;iRNA_PseU:0 15405 chr12 53578746 53578746 1 + G A UCEC 53578745 + 53578725 53578765 41 TGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCA TGCAGCCAGCAAGAAGATGATACTGAGCCAGATTGCCAGCA < 41bp 0.531880538826382 0.883765809588405 0.26004702 0.56017494 prediction 0.703770541524046 Functional Gain - ZNF740 ENSG00000139651 CDS Human protein_coding chr12:53578745 chr12:53578746 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21681 0 0 1 0 2 Ribosome 0.438677369758158 0.43868693755608 0.12034988 0 hPsi_site_15405 iPseU_CNN:0.12034988;iRNA_PseU:0 15406 chr17 41573597 41573597 1 + G A BLCA 41573596 + 41573576 41573616 41 GAAGAATTTCCAGACTTTGATGAAGAGACTGGCATTCTCCC GAAGAATTTCCAGACTTTGATAAAGAGACTGGCATTCTCCC < 41bp 0.458821655239347 0.851885066442539 0.23452148 0.30101067 prediction 0.703770132885079 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41573596 chr17:41573597 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21682 0 0 1 0 2 Cytosol 0.439283049986464 0.438614272144198 0 0 hPsi_site_15406 iPseU_CNN:0;iRNA_PseU:0 15407 chr14 23346442 23346442 1 + G A UCEC 23346441 + 23346421 23346461 41 TGGGGAGCAGGCACCCCCACTGCCCATCAAGGCTCCCCTCC TGGGGAGCAGGCACCCCCACTACCCATCAAGGCTCCCCTCC < 41bp 0.464744733915826 0.851879458151851 0.21299383 0.43102825 prediction 0.703758916303702 Functional Gain - LRP10 ENSG00000197324 CDS Human protein_coding chr14:23346441 chr14:23346442 synonymous SNV . 0 22 hPsi_associated_SNPs_21683 0 0 1 0 0 Ribosome 0.438720205705206 0.438718750668584 0 0 hPsi_site_15407 iPseU_CNN:0;iRNA_PseU:0 15408 chr7 150501524 150501524 1 + G A rs144129264 150501523 + 150501503 150501543 41 TCTGGCATCTCTGACCCCTCTGTGGCTGTACTGCTGGAGAA TCTGGCATCTCTGACCCCTCTATGGCTGTACTGCTGGAGAA < 41bp 0.461184156440521 0.85187808701458 0.20169061 0.26646715 prediction 0.703756174029159 Functional Gain - TMEM176A ENSG00000002933 CDS Human protein_coding chr7:150501523 chr7:150501524 synonymous SNV . 0 22 hPsi_associated_SNPs_21684 0 0 0 0 2 exosome 0.438715842257074 0.442325704863104 0 0 hPsi_site_15408 iPseU_CNN:0;iRNA_PseU:0 15409 chr20 30745699 30745699 1 + G A BLCA 30745698 + 30745678 30745718 41 GGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAA GGCTTCCGAAAGCAGCCATATAACAACCCTGTGCGCACCAA < 41bp 0.539335706371312 0.891212278823425 0.34065956 0.624097 prediction 0.703753144904226 Functional Gain - TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30745698 chr20:30745699 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21685 0 0 1 0 1 Nucleus 0.438718516718769 0.43871832765371 0.248194 0 hPsi_site_15409 iPseU_CNN:0.248194;iRNA_PseU:0 15410 chr17 39240487 39240487 1 + G A COAD 39240486 + 39240466 39240506 41 GCTCCTGTTGTGGCTCCGTGTGCTCTGACCAGGGCTGCAGC GCTCCTGTTGTGGCTCCGTGTACTCTGACCAGGGCTGCAGC < 41bp 0.508799829400448 0.860672418216405 0.20426705 0.45902124 prediction 0.703745177631914 Functional Gain - KRTAP4-7 ENSG00000240871 CDS Human protein_coding chr17:39240486 chr17:39240487 nonsynonymous SNV 0.445 3 22 hPsi_associated_SNPs_21686 0 0 0 0 0 unknown 0.439038398110356 0.439977442528104 0 0 hPsi_site_15410 iPseU_CNN:0;iRNA_PseU:0 15411 chr8 105361507 105361507 1 + G A SKCM 105361506 + 105361486 105361526 41 GGCCCTTGTGGTTGGAAGTATGAAAACATCTACATCACCAG GGCCCTTGTGGTTGGAAGTATAAAAACATCTACATCACCAG < 41bp 0.462163899654398 0.851871519345506 0.35094944 0.52352065 prediction 0.703743038691012 Functional Gain - DCSTAMP ENSG00000164935 CDS Human protein_coding chr8:105361506 chr8:105361507 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_21687 0 0 0 0 0 exosome 0.43891691720113 0.438718177950227 0.0470413000000001 0 hPsi_site_15411 iPseU_CNN:0.0470413000000001;iRNA_PseU:0 15412 chr9 131222883 131222883 1 + G A CESC 131222882 + 131222862 131222902 41 CCCTTACATGTTCACGTGGATGAGAACACCCCTGTCCACGT CCCTTACATGTTCACGTGGATAAGAACACCCCTGTCCACGT < 41bp 0.494860263912488 0.851867971407111 0.5098882 0.8217414 prediction 0.703735942814222 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131222882 chr9:131222883 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21688 0 0 1 0 3 Cytosol 0.438705114106702 0.435531099634602 0.6237064 0 hPsi_site_15412 iPseU_CNN:0.6237064;iRNA_PseU:0 15413 chr19 15807832 15807832 1 + G A SARC 15807831 + 15807811 15807851 41 GCCCCGCAGGAAGCTGGAATTGATCATGCGCGCCGAGGGCG GCCCCGCAGGAAGCTGGAATTAATCATGCGCGCCGAGGGCG < 41bp 0.531028800215379 0.882896242795766 0.17879483 0.2803546 prediction 0.703734885160775 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807831 chr19:15807832 synonymous SNV . 0 22 hPsi_associated_SNPs_21689 0 0 1 0 0 exosome 0.438718586236334 0.438717090443337 0 0 hPsi_site_15413 iPseU_CNN:0;iRNA_PseU:0 15414 chr10 99216591 99216591 1 + G A BLCA 99216590 + 99216570 99216610 41 CTTGCCCCATGGGAATGGAATGAGCTGGGAGCCCCCTCCCT CTTGCCCCATGGGAATGGAATAAGCTGGGAGCCCCCTCCCT < 41bp 0.466089723999467 0.851864062309763 0.48043638 0.60198706 prediction 0.703728124619527 Functional Gain - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99216590 chr10:99216591 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21690 0 0 1 0 1 Cytosol 0.438718592995074 0.438718592995102 0.20397412 0 hPsi_site_15414 iPseU_CNN:0.20397412;iRNA_PseU:0 15415 chr7 141351372 141351372 1 + G A STAD 141351371 + 141351351 141351391 41 TGCACGTGGAGGGCACGGAGTGTCTCCAAGCCAGCCAGTGC TGCACGTGGAGGGCACGGAGTATCTCCAAGCCAGCCAGTGC < 41bp 0.447757684442904 0.851847910158088 0.3094347 0.79597235 prediction 0.703695820316176 Functional Gain - AGK ENSG00000006530 CDS Human protein_coding chr7:141351371 chr7:141351372 nonsynonymous SNV 0.573 0 22 hPsi_associated_SNPs_21691 0 0 1 2 1 Cytosol 0.438718078223032 0.438711873238455 0.5919447 0 hPsi_site_15415 iPseU_CNN:0.5919447;iRNA_PseU:0 15416 chr22 50279635 50279635 1 + G A SKCM 50279634 + 50279614 50279654 41 GCTGTTGGACGTGTCGCAGGTGGACTGCGACTACAGTGGCA GCTGTTGGACGTGTCGCAGGTAGACTGCGACTACAGTGGCA < 41bp 0.531048023977251 0.882895769757785 0.38474345 0.7674371 prediction 0.703695491561068 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279634 chr22:50279635 synonymous SNV . 0 22 hPsi_associated_SNPs_21692 0 0 0 0 0 chromatin 0.438931829143517 0.437600192521604 0.5348742 0 hPsi_site_15416 iPseU_CNN:0.5348742;iRNA_PseU:0 15417 chr20 61468572 61468572 1 + G A HNSC 61468571 + 61468551 61468591 41 CCTGGCGCTCGAGGACCCCCTGGATACCGCGGTCCCACTGG CCTGGCGCTCGAGGACCCCCTAGATACCGCGGTCCCACTGG < 41bp 0.471592857210736 0.851842037784821 0.45770812 0.63611287 prediction 0.703684075569641 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468571 chr20:61468572 nonsynonymous SNV 0.595 5 22 hPsi_associated_SNPs_21693 0 0 1 0 1 Cytosol 0.438849374346207 0.438460127214408 0.27222574 0 hPsi_site_15417 iPseU_CNN:0.27222574;iRNA_PseU:0 15418 chr3 138091807 138091807 1 + G A UCEC 138091806 + 138091786 138091826 41 GATGGGGGTGTGGGCAAAAGTGCCCTCACCATCCAGTTTTT GATGGGGGTGTGGGCAAAAGTACCCTCACCATCCAGTTTTT < 41bp 0.471178418309692 0.851840376282577 0.23053542 0.30964935 prediction 0.703680752565153 Functional Gain - MRAS ENSG00000158186 CDS Human protein_coding chr3:138091806 chr3:138091807 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21694 0 0 1 0 1 Cytosol 0.438718576720977 0.438715610050992 0 0 hPsi_site_15418 iPseU_CNN:0;iRNA_PseU:0 15419 chr16 57416684 57416684 1 + G A BRCA 57416683 + 57416663 57416703 41 GGCAGCTGGACCCCTAAGGCTGAGGAACCCATCCATGCCAC GGCAGCTGGACCCCTAAGGCTAAGGAACCCATCCATGCCAC < 41bp 0.482880131467105 0.851833179991261 0.36983922 0.67605174 prediction 0.703666359982523 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416683 chr16:57416684 nonsynonymous SNV 0.127 0 22 hPsi_associated_SNPs_21695 0 0 1 0 0 nucleus 0.438718592949026 0.438718592977018 0.35210348 0 hPsi_site_15419 iPseU_CNN:0.35210348;iRNA_PseU:0 15420 chr16 27221654 27221654 1 + G A HNSC 27221653 + 27221633 27221673 41 GTGTCTGCAGAGCAGCGAGGTGATCCTGGACTACTCCTGGG GTGTCTGCAGAGCAGCGAGGTAATCCTGGACTACTCCTGGG < 41bp 0.439743472028371 0.85183286366841 0.20440206 0.7379832 prediction 0.703665727336821 Functional Gain - KDM8 ENSG00000155666 CDS Human protein_coding chr16:27221653 chr16:27221654 synonymous SNV . 0 22 hPsi_associated_SNPs_21696 0 0 0 0 0 nucleolus 0.438716940045308 0.438718613495145 0.4759664 0 hPsi_site_15420 iPseU_CNN:0.4759664;iRNA_PseU:0 15421 chr1 170136814 170136814 1 + G A rs61745741 170136813 + 170136793 170136833 41 AAGGAAGAGTGGGCTGGTGGTGCTGGGCCAGGAGAAGCAGG AAGGAAGAGTGGGCTGGTGGTACTGGGCCAGGAGAAGCAGG < 41bp 0.465815802782785 0.851816716468568 0.27907088 0.44965675 prediction 0.703633432937137 Functional Gain - METTL11B ENSG00000203740 CDS Human protein_coding chr1:170136813 chr1:170136814 synonymous SNV . 0 22 hPsi_associated_SNPs_21697 0 0 0 0 0 unknown 0.438718591861163 0.438718592773246 0 0 hPsi_site_15421 iPseU_CNN:0;iRNA_PseU:0 15422 chr16 22163899 22163899 1 + G A OV 22163898 + 22163878 22163918 41 CGCTATCACTGCCCTGTGGGTGAGGACACACTCTCCAAAAT CGCTATCACTGCCCTGTGGGTAAGGACACACTCTCCAAAAT < 41bp 0.456193747392851 0.851796485947158 0.272514 0.69893247 prediction 0.703592971894316 Functional Gain - VWA3A ENSG00000175267 CDS Human protein_coding chr16:22163898 chr16:22163899 nonsynonymous SNV 0.074 0 22 hPsi_associated_SNPs_21698 0 0 0 0 2 Endoplasmic reticulum 0.440198124251369 0.43778466914183 0.39786494 0 hPsi_site_15422 iPseU_CNN:0.39786494;iRNA_PseU:0 15423 chr15 30918282 30918282 1 + G A rs58477846 30918281 + 30918261 30918301 41 ATCAGATGTGGAGCGCTGTTTGGCGCTGCCATTTGAGCCTG ATCAGATGTGGAGCGCTGTTTAGCGCTGCCATTTGAGCCTG < 41bp 0.470950985194776 0.851796395414938 0.2264337 0.6112577 prediction 0.703592790829876 Functional Gain - ARHGAP11B ENSG00000187951;ENSG00000247728 upstream Human other chr15:30918281 chr15:30918282 . . 0 22 hPsi_associated_SNPs_21699 0 0 0 0 0 chromatin 0.438715302632564 0.440884406475481 0.2225154 0 hPsi_site_15423 iPseU_CNN:0.2225154;iRNA_PseU:0 15424 chr5 177565228 177565228 1 + G A rs551568824 177565227 + 177565207 177565247 41 GGAGGAGCTGCTGCACTACGTGGGCCAGCTGCGGGCTGAGC GGAGGAGCTGCTGCACTACGTAGGCCAGCTGCGGGCTGAGC < 41bp 0.523024388767239 0.874810820586186 0.18522826 0.28272825 prediction 0.703572863637895 Functional Gain - RMND5B ENSG00000145916 CDS Human protein_coding chr5:177565227 chr5:177565228 synonymous SNV . 0 22 hPsi_associated_SNPs_21700 0 0 1 0 1 Cytosol 0.438481096659149 0.438717730576773 0 0 hPsi_site_15424 iPseU_CNN:0;iRNA_PseU:0 15425 chrX 105855511 105855511 1 + G A GBM 105855510 + 105855490 105855530 41 TGTCACCCCCTCGGAGGTGGTGCCTGTAACTGTGCTGGCCG TGTCACCCCCTCGGAGGTGGTACCTGTAACTGTGCTGGCCG < 41bp 0.466714255447151 0.8517839112473 0.18074396 0.76424754 prediction 0.7035678224946 Functional Gain - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855510 chrX:105855511 synonymous SNV . 0 22 hPsi_associated_SNPs_21701 0 0 0 0 0 nucleus 0.438718617694045 0.438731426788532 0.52849508 0 hPsi_site_15425 iPseU_CNN:0.52849508;iRNA_PseU:0 15426 chr22 39883764 39883764 1 + G A HNSC 39883763 + 39883743 39883783 41 GGACGGCCGGAGGAGAAGCCTGAGGGGGCCAACGGCTCCTC GGACGGCCGGAGGAGAAGCCTAAGGGGGCCAACGGCTCCTC < 41bp 0.470280065713752 0.851781894218913 0.41836166 0.5724454 prediction 0.703563788437825 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883763 chr22:39883764 nonsynonymous SNV 0.170 0 22 hPsi_associated_SNPs_21702 0 0 0 0 0 Endoplasmic reticulum 0.438718589877911 0.438718575209702 0.1448908 0 hPsi_site_15426 iPseU_CNN:0.1448908;iRNA_PseU:0 15427 chr6 1610983 1610983 1 + G A HNSC 1610982 + 1610962 1611002 41 CCCGGACAAGAAGATCACCCTGAACGGCATCTACCAGTTCA CCCGGACAAGAAGATCACCCTAAACGGCATCTACCAGTTCA < 41bp 0.49319964406606 0.851777494868777 0.24614993 0.46040505 prediction 0.703554989737554 Functional Gain - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1610982 chr6:1610983 synonymous SNV . 0 22 hPsi_associated_SNPs_21703 0 0 1 0 0 Cytosol 0.43871883411415 0.438719965415899 0 0 hPsi_site_15427 iPseU_CNN:0;iRNA_PseU:0 15428 chr3 51430468 51430468 1 + G A HNSC 51430467 + 51430447 51430487 41 AGACCGAGACCGGACTTTTTTGGAAGGGGACTGGACCAGCC AGACCGAGACCGGACTTTTTTAGAAGGGGACTGGACCAGCC < 41bp 0.519131667020527 0.870893937023371 0.47921473 0.7236577 prediction 0.703524540005688 Functional Gain - RBM15B ENSG00000179837 CDS Human other chr3:51430467 chr3:51430468 synonymous SNV . 0 22 hPsi_associated_SNPs_21704 0 0 1 0 0 Cytosol 0.438718582381383 0.438718559525291 0.4473154 0 hPsi_site_15428 iPseU_CNN:0.4473154;iRNA_PseU:0 15429 chr5 156638363 156638363 1 + G A UCEC 156638362 + 156638342 156638382 41 TGAGAGCCGGCAGCGCTGGGTGCTGGCCCTTAAAGAAGGTA TGAGAGCCGGCAGCGCTGGGTACTGGCCCTTAAAGAAGGTA < 41bp 0.465331372629916 0.851762016518548 0.124853194 0.5182213 prediction 0.703524033037096 Functional Gain - ITK ENSG00000113263 CDS Human protein_coding chr5:156638362 chr5:156638363 synonymous SNV . 0 22 hPsi_associated_SNPs_21705 0 0 0 0 2 exosome 0.438718253951555 0.438718298847019 0.0364426 0 hPsi_site_15429 iPseU_CNN:0.0364426;iRNA_PseU:0 15430 chr2 73453062 73453062 1 + G A CESC 73453061 + 73453041 73453081 41 TGCAGAGCTGGGGGATGAGATGACTGATGTGTGATGTTGCC TGCAGAGCTGGGGGATGAGATAACTGATGTGTGATGTTGCC < 41bp 0.470620976456226 0.851753000546395 0.3158122 0.4461199 prediction 0.703506001092789 Functional Gain - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73453061 chr2:73453062 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21706 0 0 1 1 0 Ribosome 0.43871778267332 0.438718054365816 0 0 hPsi_site_15430 iPseU_CNN:0;iRNA_PseU:0 15431 chr11 68181430 68181430 1 + G A LUAD 68181429 + 68181409 68181449 41 CCATCCCCGGCGGCCACCGCTGCGGCTGCGCCTCACACTAC CCATCCCCGGCGGCCACCGCTACGGCTGCGCCTCACACTAC < 41bp 0.529954278135059 0.881703556769601 0.51040554 0.78589 prediction 0.703498557269083 Functional Gain - LRP5 ENSG00000162337 CDS Human protein_coding chr11:68181429 chr11:68181430 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_21707 0 0 1 0 1 Endoplasmic reticulum 0.438718913515352 0.438724056245841 0.55096892 0 hPsi_site_15431 iPseU_CNN:0.55096892;iRNA_PseU:0 15432 chrX 153649262 153649262 1 + G A UCEC 153649261 + 153649241 153649281 41 GGTGGAGATGCGGAAAGCCCTGACGGACTTCATTCAAGAGG GGTGGAGATGCGGAAAGCCCTAACGGACTTCATTCAAGAGG < 41bp 0.476469929004839 0.851723089906378 0.221511 0.29048502 prediction 0.703446179812756 Functional Gain - TAZ ENSG00000102125 CDS Human protein_coding chrX:153649261 chrX:153649262 synonymous SNV . 0 22 hPsi_associated_SNPs_21708 0 0 1 0 1 Ribosome 0.438700947488126 0.43871859491092 0 0 hPsi_site_15432 iPseU_CNN:0;iRNA_PseU:0 15433 chr1 54670693 54670693 1 + G A COAD 54670692 + 54670672 54670712 41 GTGGCTAATTACCTCAAAGGTGTAAAGCAGGCCCTCTGGCT GTGGCTAATTACCTCAAAGGTATAAAGCAGGCCCTCTGGCT < 41bp 0.465728955734143 0.851717548670089 0.5263901 0.7361634 prediction 0.703435097340178 Functional Gain - MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670692 chr1:54670693 nonsynonymous SNV 0.912 1 22 hPsi_associated_SNPs_21709 0 0 1 0 1 Ribosome 0.438718610576708 0.438718593048172 0.4195466 0 hPsi_site_15433 iPseU_CNN:0.4195466;iRNA_PseU:0 15434 chr15 76430138 76430138 1 + G A SKCM 76430137 + 76430117 76430157 41 CATTGCTCCTGTGCAGCTGGTGAACTTTGCCTATCGGGACT CATTGCTCCTGTGCAGCTGGTAAACTTTGCCTATCGGGACT < 41bp 0.448709184374892 0.851707943015983 0.35782757 0.7210325 prediction 0.703415886031966 Functional Gain - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76430137 chr15:76430138 synonymous SNV . 0 22 hPsi_associated_SNPs_21710 0 0 0 0 0 Nucleus 0.438718511567992 0.438712887358131 0.442065 0 hPsi_site_15434 iPseU_CNN:0.442065;iRNA_PseU:0 15435 chr1 151701282 151701282 1 + G A UCEC 151701281 + 151701261 151701301 41 ACTTCCCAACAAGATTCACATGCAGCTAATTAAAGACAAGA ACTTCCCAACAAGATTCACATACAGCTAATTAAAGACAAGA < 41bp 0.515601726954192 0.867309280136727 0.17458606 0.20444682 prediction 0.70341510636507 Functional Gain - RIIAD1 ENSG00000178796 CDS Human protein_coding chr1:151701281 chr1:151701282 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21711 0 0 0 0 2 exosome 0.438706520159287 0.438708625124977 0 0 hPsi_site_15435 iPseU_CNN:0;iRNA_PseU:0 15436 chr20 30584369 30584369 1 + G A UCEC 30584368 + 30584348 30584388 41 GCTGGCCTCCTACCAGAAGGTGCTGCGGGACTCGCGGGACG GCTGGCCTCCTACCAGAAGGTACTGCGGGACTCGCGGGACG < 41bp 0.532193479290571 0.883895023391973 0.34446236 0.9626641 prediction 0.703403088202805 Functional Gain - XKR7 ENSG00000260903 CDS Human protein_coding chr20:30584368 chr20:30584369 synonymous SNV . 0 22 hPsi_associated_SNPs_21712 0 0 0 0 1 exosome 0.438718591455416 0.438718452126944 0.9253282 0 hPsi_site_15436 iPseU_CNN:0.9253282;iRNA_PseU:0 15437 chr11 199444 199444 1 + G A rs144348026 199443 + 199423 199463 41 GCTCCGCAGTACACCATGGCTGCCCGTGTGGAGCCCCCAGG GCTCCGCAGTACACCATGGCTACCCGTGTGGAGCCCCCAGG < 41bp 0.494853095415416 0.851695154275415 0.21807495 0.45513964 prediction 0.70339030855083 Functional Gain - ODF3 ENSG00000177947 CDS Human protein_coding chr11:199443 chr11:199444 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_21713 0 0 0 2 2 exosome 0.438789330897303 0.44045684101657 0 0 hPsi_site_15437 iPseU_CNN:0;iRNA_PseU:0 15438 chr11 49974317 49974317 1 + G A rs113645272 49974316 + 49974296 49974336 41 GTTGAGGTCATCCTACTTACTGTAATGGCCTATGACCACTA GTTGAGGTCATCCTACTTACTATAATGGCCTATGACCACTA < 41bp 0.488696430541771 0.851691639942967 0.28116953 0.35291433 prediction 0.703383279885934 Functional Gain - OR4C13 ENSG00000258817 CDS Human protein_coding chr11:49974316 chr11:49974317 nonsynonymous SNV 0.303 1 22 hPsi_associated_SNPs_21714 0 0 0 0 0 unknown 0.438158164558795 0.438098547458227 0 0 hPsi_site_15438 iPseU_CNN:0;iRNA_PseU:0 15439 chrX 140994216 140994216 1 + G A SKCM 140994215 + 140994195 140994235 41 GTCTCTTCTCCAGATTCCTATGACCTCCTCCTTCTCCTCTA GTCTCTTCTCCAGATTCCTATAACCTCCTCCTTCTCCTCTA < 41bp 0.525336516449575 0.877027703835225 0.27130258 0.45135638 prediction 0.7033823747713 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994215 chrX:140994216 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_21715 0 0 0 0 0 exosome 0.438718592995337 0.438718592994995 0 0 hPsi_site_15439 iPseU_CNN:0;iRNA_PseU:0 15440 chr7 156468554 156468554 1 + G A LGG 156468553 + 156468533 156468573 41 GGAATGGGAGAAAATCCAAGTGCAGGTAGGTTTGGCTGGCA GGAATGGGAGAAAATCCAAGTACAGGTAGGTTTGGCTGGCA < 41bp 0.481795363120001 0.851675556375988 0.2017824 0.35034883 prediction 0.703351112751976 Functional Gain - RNF32 ENSG00000105982 CDS Human protein_coding chr7:156468553 chr7:156468554 synonymous SNV . 0 22 hPsi_associated_SNPs_21716 0 0 0 0 1 Cytosol 0.438709332365862 0.436539294030141 0 0 hPsi_site_15440 iPseU_CNN:0;iRNA_PseU:0 15441 chr14 78365490 78365490 1 + G A PAAD 78365489 + 78365469 78365509 41 GTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCA GTTCCCAGAGTTTGAGTTTATATGGCTTGTGGATGAAGCCA < 41bp 0.521347161130821 0.873019655853105 0.35821342 0.4438403 prediction 0.703344989444568 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78365489 chr14:78365490 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21717 0 0 0 0 1 chromatin 0.438718045309941 0.438718576621979 0 0 hPsi_site_15441 iPseU_CNN:0;iRNA_PseU:0 15442 chr7 123514860 123514860 1 + G A UCEC 123514859 + 123514839 123514879 41 GAAAGTGCTGCCTTGGGAGCTGCAGGCATTGTTATTTGGGG GAAAGTGCTGCCTTGGGAGCTACAGGCATTGTTATTTGGGG < 41bp 0.531311774951118 0.882983734765471 0.161096 0.23993629 prediction 0.703343919628706 Functional Gain - HYAL4 ENSG00000106302 CDS Human protein_coding chr7:123514859 chr7:123514860 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_21718 0 0 0 0 2 Nucleus 0.438718584771193 0.438718592960828 0 0 hPsi_site_15442 iPseU_CNN:0;iRNA_PseU:0 15443 chr12 67696173 67696173 1 + G A BRCA 67696172 + 67696152 67696192 41 ACGTGCAGCTGCGAAGTGCTTGGATGCTGTAGTTAGCACAA ACGTGCAGCTGCGAAGTGCTTAGATGCTGTAGTTAGCACAA < 41bp 0.463423734830723 0.851664573344305 0.22784778 0.58169013 prediction 0.70332914668861 Functional Gain - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67696172 chr12:67696173 synonymous SNV . 0 22 hPsi_associated_SNPs_21719 0 0 1 0 1 Nucleus 0.439524480727052 0.437158114971305 0.16338026 0 hPsi_site_15443 iPseU_CNN:0.16338026;iRNA_PseU:0 15444 chr14 24621178 24621178 1 + G A STAD 24621177 + 24621157 24621197 41 GCCCAGGAGTGTGCCGTGTGTGGCTGGGCCCTGCCCCACAA GCCCAGGAGTGTGCCGTGTGTAGCTGGGCCCTGCCCCACAA < 41bp 0.534678636079384 0.886325199292854 0.5976393 0.85682636 prediction 0.70329312642694 Functional Gain - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24621177 chr14:24621178 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21720 0 0 1 0 1 Ribosome 0.438714988318695 0.438257753630889 0.51837412 0 hPsi_site_15444 iPseU_CNN:0.51837412;iRNA_PseU:0 15445 chr1 36301505 36301505 1 + G A BLCA 36301504 + 36301484 36301524 41 TGTCCAGGTAAAAAATGTAGTGAAGACCTCACCTCAAACCC TGTCCAGGTAAAAAATGTAGTAAAGACCTCACCTCAAACCC < 41bp 0.463423507590874 0.85164015826922 0.44854644 0.71636474 prediction 0.703280316538439 Functional Gain - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36301504 chr1:36301505 synonymous SNV . 0 22 hPsi_associated_SNPs_21721 0 0 0 0 2 Nucleus 0.438716826696452 0.438700873794668 0.43272948 0 hPsi_site_15445 iPseU_CNN:0.43272948;iRNA_PseU:0 15446 chr6 41621408 41621408 1 + G A rs116703034 41621407 + 41621387 41621427 41 CAGGACTGTCACACAAGGCTTGAGAAGCCCCCTCTCCCTGG CAGGACTGTCACACAAGGCTTAAGAAGCCCCCTCTCCCTGG < 41bp 0.487614302479906 0.851639767152173 0.42534682 0.5699484 prediction 0.703279534304345 Functional Gain - MDFI ENSG00000112559 UTR3 Human protein_coding chr6:41621407 chr6:41621408 . . 0 22 hPsi_associated_SNPs_21722 0 0 0 0 0 Cytosol 0.438718593943787 0.438718593963033 0.1398968 0 hPsi_site_15446 iPseU_CNN:0.1398968;iRNA_PseU:0 15447 chr5 140553196 140553196 1 + G A UCEC 140553195 + 140553175 140553215 41 AAATAGCCCCGTTGGTTCCATGGTTGTCTCCGTGTCAGCCA AAATAGCCCCGTTGGTTCCATAGTTGTCTCCGTGTCAGCCA < 41bp 0.476796462500841 0.851635140828946 0.20447358 0.57243276 prediction 0.703270281657891 Functional Gain - PCDHB7 ENSG00000113212 CDS Human protein_coding chr5:140553195 chr5:140553196 nonsynonymous SNV 0.026 1 22 hPsi_associated_SNPs_21723 0 0 0 0 0 exosome 0.438718445039849 0.439094629072005 0.14486552 0 hPsi_site_15447 iPseU_CNN:0.14486552;iRNA_PseU:0 15448 chr11 5410947 5410947 1 + G A SKCM 5410946 + 5410926 5410966 41 AACTCCCATAGTATCTACTTTGGAGCGTGTCAAATCCAGAT AACTCCCATAGTATCTACTTTAGAGCGTGTCAAATCCAGAT < 41bp 0.480863291685468 0.85162547402351 0.4489431 0.8488773 prediction 0.703250948047021 Functional Gain - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410946 chr11:5410947 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_21724 0 0 0 0 0 nucleoplasm 0.438718593058899 0.438863861266316 0.6977546 0 hPsi_site_15448 iPseU_CNN:0.6977546;iRNA_PseU:0 15449 chr20 6751098 6751098 1 + G A ESCA 6751097 + 6751077 6751117 41 GCAGCCAGCCGAGCCAACACTGTGCGCAGCTTCCACCATGA GCAGCCAGCCGAGCCAACACTATGCGCAGCTTCCACCATGA < 41bp 0.534350632912198 0.885976089235786 0.21878627 0.34700805 prediction 0.703250912647175 Functional Gain - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6751097 chr20:6751098 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_21725 0 0 0 0 1 Ribosome 0.438415880612167 0.438650007487492 0 0 hPsi_site_15449 iPseU_CNN:0;iRNA_PseU:0 15450 chr2 75108881 75108881 1 + C A CESC 75108880 + 75108860 75108900 41 GGACCTTGGAGGAACAAATTTCCGGGTCCTGCTGGTCCGTG GGACCTTGGAGGAACAAATTTACGGGTCCTGCTGGTCCGTG < 41bp 0.501961768236982 0.853581036943604 0.32451564 0.70260763 prediction 0.703238537413245 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75108880 chr2:75108881 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_21726 0 0 1 0 1 Nucleus 0.438718593216415 0.438686294855224 0.40521526 0 hPsi_site_15450 iPseU_CNN:0.40521526;iRNA_PseU:0 15451 chr12 49933244 49933244 1 + G A LUAD 49933243 + 49933223 49933263 41 GGCGCCGCAGAACACCTTCCTGGACACCATCGCTACGCGCT GGCGCCGCAGAACACCTTCCTAGACACCATCGCTACGCGCT < 41bp 0.472411794028534 0.851618084796865 0.37047294 0.84102046 prediction 0.70323616959373 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49933243 chr12:49933244 synonymous SNV . 0 22 hPsi_associated_SNPs_21727 0 0 0 0 1 chromatin 0.438718592993063 0.438717921366145 0.68204092 0 hPsi_site_15451 iPseU_CNN:0.68204092;iRNA_PseU:0 15452 chr2 234201947 234201947 1 + G A rs546459716 234201946 + 234201926 234201966 41 AGGCTCTGCTGAGGGCTCTCTGTATATCTGGAGTGTGCTCA AGGCTCTGCTGAGGGCTCTCTATATATCTGGAGTGTGCTCA < 41bp 0.453586287519667 0.851607476001903 0.3111118 0.35835922 prediction 0.703214952003806 Functional Gain - ATG16L1 ENSG00000085978 CDS Human protein_coding chr2:234201946 chr2:234201947 synonymous SNV . 0 22 hPsi_associated_SNPs_21728 0 0 1 0 2 Ribosome 0.438625067263466 0.438738349058355 0 0 hPsi_site_15452 iPseU_CNN:0;iRNA_PseU:0 15453 chr20 34144009 34144009 1 + G A rs139210715 34144008 + 34143988 34144028 41 GTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGA GTTCCAGTACTTTGTGAAGGTAGTGCCCACTGTGTACATGA < 41bp 0.517666219364616 0.86927336276392 0.16527742 0.5038623 prediction 0.703214286798608 Functional Gain - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34144008 chr20:34144009 synonymous SNV . 0 22 hPsi_associated_SNPs_21729 0 0 1 0 2 Ribosome 0.438717202124522 0.438730514808148 0.00772459999999997 0 hPsi_site_15453 iPseU_CNN:0.00772459999999997;iRNA_PseU:0 15454 chr17 72741549 72741549 1 + G A CESC 72741548 + 72741528 72741568 41 CCAGCTGCTGCTCCTTCATGTGAATCCCAGGGGGCAGAGAG CCAGCTGCTGCTCCTTCATGTAAATCCCAGGGGGCAGAGAG < 41bp 0.531156907985417 0.882762829143023 0.41963184 0.641099 prediction 0.703211842315213 Functional Gain - RAB37 ENSG00000172794 CDS Human protein_coding chr17:72741548 chr17:72741549 synonymous SNV . 0 22 hPsi_associated_SNPs_21730 0 0 0 0 0 nucleus 0.438718592995117 0.438718592995009 0.282198 0 hPsi_site_15454 iPseU_CNN:0.282198;iRNA_PseU:0 15455 chr6 18457538 18457538 1 + G A rs140458002 18457537 + 18457517 18457557 41 TGTTGCAAGGATGCTTGGCATGCAGAGGTCTCCTGTAGAGA TGTTGCAAGGATGCTTGGCATACAGAGGTCTCCTGTAGAGA < 41bp 0.4593395689349 0.85159745585521 0.3106624 0.6194412 prediction 0.703194911710421 Functional Gain - RNF144B ENSG00000137393 CDS Human protein_coding chr6:18457537 chr6:18457538 nonsynonymous SNV 0.551 0 22 hPsi_associated_SNPs_21731 0 0 0 0 1 Nucleus 0.438718929614535 0.438718565027036 0.2388824 0 hPsi_site_15455 iPseU_CNN:0.2388824;iRNA_PseU:0 15456 chr2 169764249 169764249 1 + G A UCEC 169764248 + 169764228 169764268 41 TGCCCATAGCCAAAAAGTGGTGTGCTAACCCCGACTGGATC TGCCCATAGCCAAAAAGTGGTATGCTAACCCCGACTGGATC < 41bp 0.530573661090324 0.882171108835937 0.5773853 0.76766056 prediction 0.703194895491225 Functional Gain - G6PC2 ENSG00000152254 CDS Human protein_coding chr2:169764248 chr2:169764249 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21732 0 0 0 0 0 Nucleus 0.43872621559201 0.438859986288642 0.38055052 0 hPsi_site_15456 iPseU_CNN:0.38055052;iRNA_PseU:0 15457 chr6 13977902 13977902 1 + G A LUAD 13977901 + 13977881 13977921 41 GTTTCAGACATCCATCCGGGTGTTAGTGTGGTTGCTAGGTT GTTTCAGACATCCATCCGGGTATTAGTGTGGTTGCTAGGTT < 41bp 0.460976674076133 0.851594050032468 0.22953495 0.39343503 prediction 0.703188100064936 Functional Gain - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977901 chr6:13977902 synonymous SNV . 0 22 hPsi_associated_SNPs_21733 0 0 1 0 0 chromatin 0.438718589679117 0.438718592992039 0 0 hPsi_site_15457 iPseU_CNN:0;iRNA_PseU:0 15458 chr12 121426771 121426771 1 + G A SKCM 121426770 + 121426750 121426790 41 CCTCAACAAGGGCACTCCCATGAAGACGCAGAAGCGGGCCG CCTCAACAAGGGCACTCCCATAAAGACGCAGAAGCGGGCCG < 41bp 0.469897931111334 0.851591943795985 0.28561032 0.2779515 prediction 0.70318388759197 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121426770 chr12:121426771 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_21734 0 0 0 0 0 cytosol 0.438718577639147 0.438717785535864 0 0 hPsi_site_15458 iPseU_CNN:0;iRNA_PseU:0 15459 chr19 54653392 54653392 1 + G A rs370849920 54653391 + 54653371 54653411 41 AGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGCTCCCC AGCCTCCTGGTGCCACTGCCTATGAATCCTCCCAGCTCCCC < 41bp 0.542148919163611 0.893740655770524 0.20168579 0.30563506 prediction 0.703183473213826 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54653391 chr19:54653392 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_21735 0 0 1 0 1 Ribosome 0.438718900581895 0.438718431617178 0 0 hPsi_site_15459 iPseU_CNN:0;iRNA_PseU:0 15460 chr11 66050547 66050547 1 + G A LUSC 66050546 + 66050526 66050566 41 CATCCACGGCCTCTTCTGTCTGATGTTTCTGTGTGCAGCAG CATCCACGGCCTCTTCTGTCTAATGTTTCTGTGTGCAGCAG < 41bp 0.468889462765048 0.851590953817905 0.27856672 0.32228735 prediction 0.70318190763581 Functional Gain - CNIH2 ENSG00000174871 CDS Human protein_coding chr11:66050546 chr11:66050547 synonymous SNV . 0 22 hPsi_associated_SNPs_21736 0 0 1 2 2 chromatin 0.438053787229783 0.438550854383627 0 0 hPsi_site_15460 iPseU_CNN:0;iRNA_PseU:0 15461 chr22 45689181 45689181 1 + G A CESC 45689180 + 45689160 45689200 41 GTGGGTTTTGCTGGCGCCATTGCCCTCAGCCTCGTGTAAGT GTGGGTTTTGCTGGCGCCATTACCCTCAGCCTCGTGTAAGT < 41bp 0.465120487738836 0.851561343851234 0.16043392 0.28687036 prediction 0.703122687702469 Functional Gain - UPK3A ENSG00000100373 CDS Human protein_coding chr22:45689180 chr22:45689181 nonsynonymous SNV 0.175 0 22 hPsi_associated_SNPs_21737 0 0 1 0 1 exosome 0.438719600606048 0.438711152825432 0 0 hPsi_site_15461 iPseU_CNN:0;iRNA_PseU:0 15462 chr4 6235183 6235183 1 + G A rs572608827 6235182 + 6235162 6235202 41 GACGCCACCCAGGTCACCGGTGCAAACCTCCAGCCCCTGCC GACGCCACCCAGGTCACCGGTACAAACCTCCAGCCCCTGCC < 41bp 0.509596730562717 0.861156591709809 0.81558394 0.95938325 prediction 0.703119722294185 Functional Gain - LINC02495 ENSG00000249896 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:6235182 chr4:6235183 . . 0 22 hPsi_associated_SNPs_21738 0 0 0 0 0 unknown 0.43871859129568 0.438718796783076 0.28759862 0 hPsi_site_15462 iPseU_CNN:0.28759862;iRNA_PseU:0 15463 chr6 41303997 41303997 1 + G A SKCM 41303996 + 41303976 41304016 41 CAGCTCCAAGCCCAGGACGATGGCTTGGACCTCTCGATTCA CAGCTCCAAGCCCAGGACGATAGCTTGGACCTCTCGATTCA < 41bp 0.538395988735019 0.889948529882044 0.21374169 0.36377895 prediction 0.70310508229405 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41303996 chr6:41303997 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21739 0 0 0 0 0 exosome 0.438314059951458 0.438750715181224 0 0 hPsi_site_15463 iPseU_CNN:0;iRNA_PseU:0 15464 chr12 101017534 101017534 1 + G A LUSC 101017533 + 101017513 101017553 41 AACACCTCAGCCTCCTGAAATGAATCCTTTGTCAGCAGTTA AACACCTCAGCCTCCTGAAATAAATCCTTTGTCAGCAGTTA < 41bp 0.470553952754276 0.851551083546057 0.3431015 0.395415 prediction 0.703102167092114 Functional Gain - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101017533 chr12:101017534 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21740 0 0 0 0 0 Cytosol 0.43871876157035 0.438718592995102 0 0 hPsi_site_15464 iPseU_CNN:0;iRNA_PseU:0 15465 chr19 17397230 17397230 1 + G A PRAD 17397229 + 17397209 17397249 41 CAGAAGCAAGGGCACTGCTATGGAGTGGTGGCAGGCTGGCC CAGAAGCAAGGGCACTGCTATAGAGTGGTGGCAGGCTGGCC < 41bp 0.53133342079095 0.882875805844986 0.28740662 0.49147266 prediction 0.703084770108073 Functional Gain - ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17397229 chr19:17397230 nonsynonymous SNV 0.954 3 22 hPsi_associated_SNPs_21741 0 0 0 0 1 chromatin 0.438718592986109 0.438360048192707 0 0 hPsi_site_15465 iPseU_CNN:0;iRNA_PseU:0 15466 chr20 2591113 2591113 1 + G A BLCA 2591112 + 2591092 2591132 41 ATGTTTTGTCCCCCTCTGTTTGAAACCATCGCTGCCCTGGA ATGTTTTGTCCCCCTCTGTTTAAAACCATCGCTGCCCTGGA < 41bp 0.542369018310264 0.893900411132219 0.39356175 0.6835652 prediction 0.703062785643911 Functional Gain - TMC2 ENSG00000149488 CDS Human protein_coding chr20:2591112 chr20:2591113 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21742 0 0 0 0 1 exosome 0.438718590138026 0.438706212900499 0.3671304 0 hPsi_site_15466 iPseU_CNN:0.3671304;iRNA_PseU:0 15467 chr15 101440908 101440908 1 + G A UCEC 101440907 + 101440887 101440927 41 GTCAGGCGGAGCGTGGAGTATGCCAAGAAACGGCCCGTGGG GTCAGGCGGAGCGTGGAGTATACCAAGAAACGGCCCGTGGG < 41bp 0.447660886066879 0.851527216490739 0.2678045 0.6576383 prediction 0.703054432981478 Functional Gain - ALDH1A3 ENSG00000184254 CDS Human protein_coding chr15:101440907 chr15:101440908 nonsynonymous SNV 0.534 3 22 hPsi_associated_SNPs_21743 0 0 0 0 1 Nucleus 0.43871859286046 0.438718588769473 0.3152766 0 hPsi_site_15467 iPseU_CNN:0.3152766;iRNA_PseU:0 15468 chr12 124229203 124229203 1 + G A BRCA 124229202 + 124229182 124229222 41 GCTGATGGGGCTGTTCTCAGTGTACACTGGCCTCATCTACA GCTGATGGGGCTGTTCTCAGTATACACTGGCCTCATCTACA < 41bp 0.53898475371185 0.890506925263775 0.32967588 0.6889647 prediction 0.70304434310385 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124229202 chr12:124229203 synonymous SNV . 0 22 hPsi_associated_SNPs_21744 0 0 1 0 1 Endoplasmic reticulum 0.438949719183562 0.439054197271881 0.3779294 0 hPsi_site_15468 iPseU_CNN:0.3779294;iRNA_PseU:0 15469 chrX 68059870 68059870 1 + C A LUAD 68059869 + 68059849 68059889 41 CAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGCCC CAAGGAGGCAGACAACACTGTAAAGATGGCCACACAGGCCC < 41bp 0.508844752199111 0.860362112149745 0.38884622 0.68667984 prediction 0.703034719901268 Functional Gain - EFNB1 ENSG00000090776 CDS Human protein_coding chrX:68059869 chrX:68059870 synonymous SNV . 0 22 hPsi_associated_SNPs_21745 0 0 0 0 2 Endoplasmic reticulum 0.438724336877013 0.438716891838141 0.37335968 0 hPsi_site_15469 iPseU_CNN:0.37335968;iRNA_PseU:0 15470 chrX 69649442 69649442 1 + G A UCEC 69649441 + 69649421 69649461 41 GAAGAGCTATTGGAGGAAGCTGCAGCCCTCAACCTTTCCAT GAAGAGCTATTGGAGGAAGCTACAGCCCTCAACCTTTCCAT < 41bp 0.540370773296833 0.891885921428011 0.3147889 0.65595573 prediction 0.703030296262354 Functional Gain - GDPD2 ENSG00000130055 CDS Human protein_coding chrX:69649441 chrX:69649442 nonsynonymous SNV 0.814 0 22 hPsi_associated_SNPs_21746 0 0 0 0 1 exosome 0.438718593308438 0.438718597660283 0.31191146 0 hPsi_site_15470 iPseU_CNN:0.31191146;iRNA_PseU:0 15471 chr6 42930538 42930538 1 + G A rs143043221 42930537 + 42930517 42930557 41 TGGATGACTCTGGACAAAGATGTGCCCCAGTCAGCAGAGGG TGGATGACTCTGGACAAAGATATGCCCCAGTCAGCAGAGGG < 41bp 0.537977041307933 0.889490737857623 0.36482966 0.7976445 prediction 0.703027393099381 Functional Gain - CNPY3-GNMT;GNMT ENSG00000124713 CDS Human protein_coding chr6:42930537 chr6:42930538 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_21747 0 0 0 0 2 unknown 0.43883582409103 0.438892223310321 0.595289 0 hPsi_site_15471 iPseU_CNN:0.595289;iRNA_PseU:0 15472 chr19 42814694 42814694 1 + G A SKCM 42814693 + 42814673 42814713 41 CTTGTTAAAAAGCATCTGGCTGGTAGCCACGCCACCCCCTC CTTGTTAAAAAGCATCTGGCTAGTAGCCACGCCACCCCCTC < 41bp 0.534131968703561 0.885640598028517 0.11393508 0.2177287 prediction 0.703017258649911 Functional Gain - PRR19 ENSG00000188368 CDS Human protein_coding chr19:42814693 chr19:42814694 synonymous SNV . 0 22 hPsi_associated_SNPs_21748 0 0 0 0 0 exosome 0.438718592995127 0.438718592995101 0 0 hPsi_site_15472 iPseU_CNN:0;iRNA_PseU:0 15473 chrX 16672594 16672594 1 + G A rs199885083 16672593 + 16672573 16672613 41 GGAGATGGAGAAGTTAGTTTTGAAGAATTCCAAGTATTAGT GGAGATGGAGAAGTTAGTTTTAAAGAATTCCAAGTATTAGT < 41bp 0.513661727849802 0.86515637532462 0.2723884 0.47206587 prediction 0.702989294949635 Functional Gain - S100G ENSG00000169906 CDS Human protein_coding chrX:16672593 chrX:16672594 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_21749 0 0 0 0 0 exosome 0.43871859297971 0.438718592995129 0 0 hPsi_site_15473 iPseU_CNN:0;iRNA_PseU:0 15474 chr6 24533853 24533853 1 + G A LUSC 24533852 + 24533832 24533872 41 GGAGTGCCCTTTTGGTGGAGTGAAGCAGTCCGGCCTTGGGC GGAGTGCCCTTTTGGTGGAGTAAAGCAGTCCGGCCTTGGGC < 41bp 0.528746793604057 0.880241125918349 0.2789304 0.3360754 prediction 0.702988664628584 Functional Gain - ALDH5A1 ENSG00000112294 CDS Human protein_coding chr6:24533852 chr6:24533853 synonymous SNV . 0 22 hPsi_associated_SNPs_21750 0 0 1 0 0 Nucleus 0.438718592995102 0.438718590129051 0 0 hPsi_site_15474 iPseU_CNN:0;iRNA_PseU:0 15475 chr11 5842193 5842193 1 + G A rs148100123 5842192 + 5842172 5842212 41 ATGGTTGCTCTCCTGATTGGTGTGTTTGATATCTGCTGTAT ATGGTTGCTCTCCTGATTGGTATGTTTGATATCTGCTGTAT < 41bp 0.509739348617013 0.861229630270106 0.27295083 0.40935332 prediction 0.702980563306185 Functional Gain - OR52N2 ENSG00000180988 CDS Human protein_coding chr11:5842192 chr11:5842193 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21751 0 0 0 0 0 unknown 0.438718921931299 0.438718963264012 0 0 hPsi_site_15475 iPseU_CNN:0;iRNA_PseU:0 15476 chr19 57867600 57867600 1 + G A COAD 57867599 + 57867579 57867619 41 GAAACTGTGCACACGTGGGCTGTGTAGGAGAAGATTCTCGT GAAACTGTGCACACGTGGGCTATGTAGGAGAAGATTCTCGT < 41bp 0.473907367945842 0.851478730812883 0.30369088 0.3164802 prediction 0.702957461625765 Functional Gain - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57867599 chr19:57867600 synonymous SNV . 0 22 hPsi_associated_SNPs_21752 0 0 0 0 0 chromatin 0.438802233864229 0.438705023822682 0 0 hPsi_site_15476 iPseU_CNN:0;iRNA_PseU:0 15477 chr11 5411319 5411319 1 + G A SKCM 5411318 + 5411298 5411338 41 GTGCTCATCGCACTGTCCTATGGACTCATCCTGCACACAGT GTGCTCATCGCACTGTCCTATAGACTCATCCTGCACACAGT < 41bp 0.478118658917106 0.851473965030854 0.27215773 0.31448758 prediction 0.702947930061709 Functional Gain - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5411318 chr11:5411319 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21753 0 0 0 0 0 nucleoplasm 0.438656628259561 0.439016105811152 0 0 hPsi_site_15477 iPseU_CNN:0;iRNA_PseU:0 Urinary albumin excretion 15478 chr1 155294922 155294922 1 + G A LUSC 155294921 + 155294901 155294941 41 ATAGCCGTCAGCGTCTCCGTTGATAAAATCATCTCGCATTT ATAGCCGTCAGCGTCTCCGTTAATAAAATCATCTCGCATTT < 41bp 0.475043467105086 0.851472934703811 0.62770045 0.68787634 prediction 0.702945869407623 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155294921 chr1:155294922 nonsynonymous SNV 0.921 4 22 hPsi_associated_SNPs_21754 0 0 1 1 2 Cytosol 0.438718588068774 0.438674206832472 0.12035178 0 hPsi_site_15478 iPseU_CNN:0.12035178;iRNA_PseU:0 15479 chr16 3406487 3406487 1 + G A COAD 3406486 + 3406466 3406506 41 GGATTCCTCTGCGAGGTGCCTGCCATGATCAAACTGGCCTG GGATTCCTCTGCGAGGTGCCTACCATGATCAAACTGGCCTG < 41bp 0.481940276618046 0.851472169166421 0.27222943 0.6235804 prediction 0.702944338332841 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406486 chr16:3406487 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_21755 0 0 0 0 0 unknown 0.438719811066208 0.438720815368558 0.2471608 0 hPsi_site_15479 iPseU_CNN:0.2471608;iRNA_PseU:0 15480 chr11 5443893 5443893 1 + G A rs10838094 5443892 + 5443872 5443912 41 TTAGCCATCATTTGCTGCTGTGTTCTGGCGGTTCTTCCCTC TTAGCCATCATTTGCTGCTGTATTCTGGCGGTTCTTCCCTC < 41bp 0.51386291580363 0.865330389219225 0.31163073 0.37917536 prediction 0.702934946831189 Functional Gain - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5443892 chr11:5443893 nonsynonymous SNV 0.675 0 22 hPsi_associated_SNPs_21756 0 0 0 0 0 chromatin 0.438718609917903 0.438722028724783 0 0 hPsi_site_15480 iPseU_CNN:0;iRNA_PseU:0 15481 chr9 35606884 35606884 1 + G A rs2275422 35606883 + 35606863 35606903 41 GCTCAGCTCCCCTGAACCCCTGTCCTGGCCGGTCAGGCTCC GCTCAGCTCCCCTGAACCCCTATCCTGGCCGGTCAGGCTCC < 41bp 0.532932558071423 0.884393334537584 0.22023723 0.2712447 prediction 0.702921552932323 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35606883 chr9:35606884 synonymous SNV . 0 22 hPsi_associated_SNPs_21757 0 0 1 0 2 Cytosol 0.438788046398822 0.439332965637746 0 0 hPsi_site_15481 iPseU_CNN:0;iRNA_PseU:0 15482 chr16 84024134 84024134 1 + G A COAD 84024133 + 84024113 84024153 41 GAGCAACGTGGACCAGTTTGTGACCCGCTTCCTCCTGAAGG GAGCAACGTGGACCAGTTTGTAACCCGCTTCCTCCTGAAGG < 41bp 0.447420819796889 0.851457235953608 0.26028067 0.7650652 prediction 0.702914471907217 Functional Gain - NECAB2 ENSG00000103154 CDS Human protein_coding chr16:84024133 chr16:84024134 synonymous SNV . 0 22 hPsi_associated_SNPs_21758 0 0 0 0 1 exosome 0.438718593124015 0.438718592983288 0.5301304 0 hPsi_site_15482 iPseU_CNN:0.5301304;iRNA_PseU:0 15483 chr9 98231303 98231303 1 + G A SKCM 98231302 + 98231282 98231322 41 CTCCGTGCGGAGCTGGACAGTGGACTGCATGGTAATCTGCG CTCCGTGCGGAGCTGGACAGTAGACTGCATGGTAATCTGCG < 41bp 0.462038283891288 0.851447098098387 0.25513023 0.45531443 prediction 0.702894196196773 Functional Gain - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98231302 chr9:98231303 synonymous SNV . 0 22 hPsi_associated_SNPs_21759 0 0 0 0 0 Endoplasmic reticulum 0.438728019297333 0.438709255460912 0 0 hPsi_site_15483 iPseU_CNN:0;iRNA_PseU:0 15484 chr10 29773679 29773679 1 + G A OV 29773678 + 29773658 29773698 41 TCCATAAGTGCTTTGCCAGCTGAAATGCTATTTTTCGTTGT TCCATAAGTGCTTTGCCAGCTAAAATGCTATTTTTCGTTGT < 41bp 0.510922289602168 0.862368529397434 0.23048791 0.3141024 prediction 0.702892479590532 Functional Gain - SVIL ENSG00000197321 CDS Human protein_coding chr10:29773678 chr10:29773679 stopgain 1.000 1 22 hPsi_associated_SNPs_21760 0 0 0 0 0 Nucleus 0.438591296088139 0.500548329119892 0 0.00109665823978311 hPsi_site_15484 iPseU_CNN:0;iRNA_PseU:0.00109665823978311 15485 chrX 149013205 149013205 1 + G A COAD 149013204 + 149013184 149013224 41 CATGGGAACCCTTGAGGAGGTGACTGATTCTGGGTCACCAA CATGGGAACCCTTGAGGAGGTAACTGATTCTGGGTCACCAA < 41bp 0.524415561395764 0.875854814086203 0.33337906 0.7876127 prediction 0.702878505380877 Functional Gain - MAGEA8 ENSG00000156009 CDS Human protein_coding chrX:149013204 chrX:149013205 synonymous SNV . 0 22 hPsi_associated_SNPs_21761 0 0 0 0 0 exosome 0.438718592995102 0.43871857889938 0.5752254 0 hPsi_site_15485 iPseU_CNN:0.5752254;iRNA_PseU:0 15486 chr17 58725291 58725291 1 + G A BRCA 58725290 + 58725270 58725310 41 GATTTCTTCAGTGGTGAATTTGTGGTGTCACCTGAACCAGA GATTTCTTCAGTGGTGAATTTATGGTGTCACCTGAACCAGA < 41bp 0.533940537994091 0.885374533726598 0.44044688 0.70342183 prediction 0.702867991465013 Functional Gain - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58725290 chr17:58725291 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21762 0 0 1 1 1 Cytosol 0.405637921610144 0.43207588823948 0.40684366 0 hPsi_site_15486 iPseU_CNN:0.40684366;iRNA_PseU:0 15487 chr17 79682559 79682559 1 + G A UCEC 79682558 + 79682538 79682578 41 TACGAGACTGTGCGGGACCGTGTGGCCAAGGGCAGCCAGGG TACGAGACTGTGCGGGACCGTATGGCCAAGGGCAGCCAGGG < 41bp 0.443664506884873 0.85143082447223 0.3391817 0.5085746 prediction 0.702861648944461 Functional Gain - SLC25A10 ENSG00000183048;ENSG00000262660 CDS Human other chr17:79682558 chr17:79682559 nonsynonymous SNV 0.013 0 22 hPsi_associated_SNPs_21763 0 0 1 0 2 Ribosome 0.438688719032236 0.438116794858915 0.0171492 0 hPsi_site_15487 iPseU_CNN:0.0171492;iRNA_PseU:0 15488 chr1 17281920 17281920 1 + G A BLCA 17281919 + 17281899 17281939 41 GAGCCAGGAGGGCCGGGAGGTGCAGCGCCAGGAGGCAGGCG GAGCCAGGAGGGCCGGGAGGTACAGCGCCAGGAGGCAGGCG < 41bp 0.467324901061928 0.851421451594407 0.28328258 0.72905654 prediction 0.702842903188813 Functional Gain - CROCC ENSG00000058453 CDS Human protein_coding chr1:17281919 chr1:17281920 synonymous SNV . 0 22 hPsi_associated_SNPs_21764 0 0 0 0 0 chromatin 0.438718594341977 0.438718593130194 0.45811308 0 hPsi_site_15488 iPseU_CNN:0.45811308;iRNA_PseU:0 15489 chr11 65988123 65988123 1 + G A GBM 65988122 + 65988102 65988142 41 GTGGGCTTTGGGCTGGAGCATGTGTCCCGCGAGCAGATCCG GTGGGCTTTGGGCTGGAGCATATGTCCCGCGAGCAGATCCG < 41bp 0.448278869116559 0.851418558110479 0.32294506 0.50362253 prediction 0.702837116220957 Functional Gain - PACS1 ENSG00000175115 CDS Human protein_coding chr11:65988122 chr11:65988123 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_21765 0 0 1 0 1 Cytosol 0.438707502211862 0.438678088601413 0.00724506000000003 0 hPsi_site_15489 iPseU_CNN:0.00724506000000003;iRNA_PseU:0 15490 chr19 37368540 37368540 1 + G A LIHC 37368539 + 37368519 37368559 41 TGTGGTAAGGCCTTTAGTTTTGGATCAGCCCTTACTCGACA TGTGGTAAGGCCTTTAGTTTTAGATCAGCCCTTACTCGACA < 41bp 0.473335358331182 0.851414349700729 0.3429259 0.6144184 prediction 0.702828699401458 Functional Gain - ZNF345 ENSG00000251247 CDS Human protein_coding chr19:37368539 chr19:37368540 nonsynonymous SNV 0.640 0 22 hPsi_associated_SNPs_21766 0 0 0 0 0 Nucleus 0.438718592972223 0.43871856600503 0.2288368 0 hPsi_site_15490 iPseU_CNN:0.2288368;iRNA_PseU:0 15491 chr18 670771 670771 1 + G A COAD 670770 + 670750 670790 41 CAGTGAGCTGTCCTGCCAGCTGTACCAGAGATCGGGAGACA CAGTGAGCTGTCCTGCCAGCTATACCAGAGATCGGGAGACA < 41bp 0.543717099948421 0.895121655510922 0.25219482 0.38862354 prediction 0.702809111125001 Functional Gain - TYMS ENSG00000176890 CDS Human protein_coding chr18:670770 chr18:670771 synonymous SNV . 0 22 hPsi_associated_SNPs_21767 0 0 1 0 2 Ribosome 0.424602380409498 0.435417231268265 0 0 hPsi_site_15491 iPseU_CNN:0;iRNA_PseU:0 15492 chr12 124229281 124229281 1 + G A UCEC 124229280 + 124229260 124229300 41 TGGGTGGAACGTGTCGGCCATGTACAGCTCCAGCCACCCAC TGGGTGGAACGTGTCGGCCATATACAGCTCCAGCCACCCAC < 41bp 0.536101395126501 0.887505029844455 0.24424255 0.59496 prediction 0.702807269435909 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124229280 chr12:124229281 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_21768 0 0 1 0 1 Endoplasmic reticulum 0.43793149054931 0.437994144092362 0.18992 0 hPsi_site_15492 iPseU_CNN:0.18992;iRNA_PseU:0 15493 chr5 133474672 133474672 1 + C A GBM 133474671 + 133474651 133474691 41 CTCTGCAGACCCCTGACCTCTCTGGCTTCTACTCCCTGACC CTCTGCAGACCCCTGACCTCTATGGCTTCTACTCCCTGACC < 41bp 0.508299511913728 0.859694265494433 0.24825469 0.57339126 prediction 0.702789507161409 Functional Gain - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133474671 chr5:133474672 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_21769 0 0 1 0 2 Cytosol 0.438718592992938 0.438718592270675 0.14678252 0 hPsi_site_15493 iPseU_CNN:0.14678252;iRNA_PseU:0 15494 chr14 23945265 23945265 1 + G A HNSC 23945264 + 23945244 23945284 41 TCTGAGGATGAGGAGGAAGATGAAGCAGAAGATGACCAGTC TCTGAGGATGAGGAGGAAGATAAAGCAGAAGATGACCAGTC < 41bp 0.45463175244678 0.851385670344498 0.3114533 0.38007706 prediction 0.702771340688995 Functional Gain - NGDN ENSG00000129460 CDS Human protein_coding chr14:23945264 chr14:23945265 nonsynonymous SNV 0.360 1 22 hPsi_associated_SNPs_21770 0 0 1 0 2 Cytosol 0.438718593001062 0.438718593072597 0 0 hPsi_site_15494 iPseU_CNN:0;iRNA_PseU:0 15495 chr21 43982247 43982247 1 + C A rs77485357 43982246 + 43982226 43982266 41 GCTGGTCAGCTATACTTTCCTCTTCTGGCTGCCCCTGTACA GCTGGTCAGCTATACTTTCCTATTCTGGCTGCCCCTGTACA < 41bp 0.50059630201067 0.851975540480531 0.24910736 0.35891286 prediction 0.702758476939721 Functional Gain - SLC37A1 ENSG00000160190 CDS Human protein_coding chr21:43982246 chr21:43982247 synonymous SNV . 0 22 hPsi_associated_SNPs_21771 0 0 0 0 2 Nucleus 0.438658558100664 0.438708981286857 0 0 hPsi_site_15495 iPseU_CNN:0;iRNA_PseU:0 15496 chr16 66919043 66919043 1 + G A PRAD 66919042 + 66919022 66919062 41 TTGCACGTGGCAAATGCTGGTGACTGCCGAGCCATCCTTGG TTGCACGTGGCAAATGCTGGTAACTGCCGAGCCATCCTTGG < 41bp 0.474150761352197 0.851373216871095 0.24943352 0.5970628 prediction 0.70274643374219 Functional Gain - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66919042 chr16:66919043 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21772 0 0 1 0 0 nucleolus 0.43871859863034 0.438718591823888 0.1941256 0 hPsi_site_15496 iPseU_CNN:0.1941256;iRNA_PseU:0 15497 chr22 32211030 32211030 1 + G A UCEC 32211029 + 32211009 32211049 41 AAGAGTGCCAGCTCCTGTGATGTTTCATCCAGCCCTTCCCT AAGAGTGCCAGCTCCTGTGATATTTCATCCAGCCCTTCCCT < 41bp 0.474858665331363 0.85136556569597 0.3892932 0.59277606 prediction 0.70273113139194 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32211029 chr22:32211030 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21773 0 0 1 0 1 chromatin 0.348341971615714 0.433417227091051 0.18555212 0 hPsi_site_15497 iPseU_CNN:0.18555212;iRNA_PseU:0 15498 chr1 47904409 47904409 1 + G A BLCA 47904408 + 47904388 47904428 41 ACCCGGGCAAGGGCAACTACTGGACGCTGGACCCGGAGTCG ACCCGGGCAAGGGCAACTACTAGACGCTGGACCCGGAGTCG < 41bp 0.479817480866485 0.851364953861886 0.23632464 0.32824826 prediction 0.702729907723771 Functional Gain - FOXD2 ENSG00000186564 CDS Human protein_coding chr1:47904408 chr1:47904409 stopgain 0.999 0 22 hPsi_associated_SNPs_21774 0 0 0 0 0 chromatin 0.438707326723835 0.43871859623411 0 0 hPsi_site_15498 iPseU_CNN:0;iRNA_PseU:0 15499 chr5 176517466 176517466 1 + G A LGG 176517465 + 176517445 176517485 41 TTGGGCAGCCTGTGCGTCTGTGCTGTGGGCGGGCTGAGCGT TTGGGCAGCCTGTGCGTCTGTACTGTGGGCGGGCTGAGCGT < 41bp 0.450811302298401 0.851364124389695 0.26378098 0.5837305 prediction 0.702728248779389 Functional Gain - FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176517465 chr5:176517466 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_21775 0 0 1 0 1 Endoplasmic reticulum 0.438713548452507 0.438728734704903 0.167461 0 hPsi_site_15499 iPseU_CNN:0.167461;iRNA_PseU:0 15500 chr16 67915412 67915412 1 + G A BLCA 67915411 + 67915391 67915431 41 CTATGGCAGGGATGCAGCCATGGGATCCCGGCTCACAGAGC CTATGGCAGGGATGCAGCCATAGGATCCCGGCTCACAGAGC < 41bp 0.452775368619826 0.851361821284189 0.23247665 0.28771323 prediction 0.702723642568379 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915411 chr16:67915412 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_21776 0 0 1 0 2 Cytosol 0.438720410311192 0.438718921928322 0 0 hPsi_site_15500 iPseU_CNN:0;iRNA_PseU:0 15501 chr16 2881830 2881830 1 + G A SKCM 2881829 + 2881809 2881849 41 ACTTGGAGACTCCTGGGACGTGAAACTGGGAGCCTTAGGTG ACTTGGAGACTCCTGGGACGTAAAACTGGGAGCCTTAGGTG < 41bp 0.47073414531749 0.851361042763006 0.14743623 0.33493853 prediction 0.702722085526011 Functional Gain - ZG16B ENSG00000162078 CDS Human protein_coding chr16:2881829 chr16:2881830 synonymous SNV . 0 22 hPsi_associated_SNPs_21777 0 0 1 0 0 exosome 0.438718592995102 0.438718592995046 0 0 hPsi_site_15501 iPseU_CNN:0;iRNA_PseU:0 15502 chr12 50344844 50344844 1 + G A SKCM 50344843 + 50344823 50344863 41 CGTGACTGTGGCCTGCCTGGTGGGCTGCCACGTCTCCGTTC CGTGACTGTGGCCTGCCTGGTAGGCTGCCACGTCTCCGTTC < 41bp 0.533366083389494 0.884725043888198 0.312893 0.76827425 prediction 0.702717920997407 Functional Gain - AQP2 ENSG00000167580 CDS Human protein_coding chr12:50344843 chr12:50344844 synonymous SNV . 0 22 hPsi_associated_SNPs_21778 0 0 0 0 0 Ribosome 0.438964979224253 0.438718958881291 0.5365485 0 hPsi_site_15502 iPseU_CNN:0.5365485;iRNA_PseU:0 15503 chr11 57425228 57425228 1 + G A rs117284601 57425227 + 57425207 57425247 41 TCACAGCGCAAGTGCGGAACTGCGTTTGTTTCCGGCGTGGG TCACAGCGCAAGTGCGGAACTACGTTTGTTTCCGGCGTGGG < 41bp 0.521502813469756 0.872860851514665 0.34703273 0.6650916 prediction 0.702716076089816 Functional Gain - CLP1 ENSG00000172409 UTR5 Human protein_coding chr11:57425227 chr11:57425228 . . 0 22 hPsi_associated_SNPs_21779 0 0 0 0 0 Cytosol 0.438717601775527 0.438526820035943 0.3301832 0 hPsi_site_15503 iPseU_CNN:0.3301832;iRNA_PseU:0 15504 chr15 91308599 91308599 1 + G A COAD 91308598 + 91308578 91308618 41 CACTGTTGTCATTTCTCCCTTGAGATCACTTATCGTAGATC CACTGTTGTCATTTCTCCCTTAAGATCACTTATCGTAGATC < 41bp 0.459353970384684 0.851351668981315 0.3095191 0.36365598 prediction 0.70270333796263 Functional Gain - BLM ENSG00000197299 CDS Human protein_coding chr15:91308598 chr15:91308599 synonymous SNV . 0 22 hPsi_associated_SNPs_21780 0 0 1 0 2 Ribosome 0.438718601664556 0.438721903786784 0 0 hPsi_site_15504 iPseU_CNN:0;iRNA_PseU:0 15505 chr19 36245194 36245194 1 + G A UCEC 36245193 + 36245173 36245213 41 CACACTCATCTATCGCAACATGCAGCGCTGGAAACGCATCC CACACTCATCTATCGCAACATACAGCGCTGGAAACGCATCC < 41bp 0.462947874561774 0.851347643363887 0.17164102 0.31963688 prediction 0.702695286727774 Functional Gain - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36245193 chr19:36245194 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21781 0 0 1 0 2 Cytosol 0.438718530314899 0.438718589917317 0 0 hPsi_site_15505 iPseU_CNN:0;iRNA_PseU:0 15506 chr11 5411015 5411015 1 + G A SKCM 5411014 + 5410994 5411034 41 GGAGTCCTCAGTGCTCCTCATGATGTCCTTTGACCGCCTTG GGAGTCCTCAGTGCTCCTCATAATGTCCTTTGACCGCCTTG < 41bp 0.520878473396957 0.872226069533489 0.23188385 0.32331616 prediction 0.702695192273065 Functional Gain - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5411014 chr11:5411015 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_21782 0 0 0 0 0 nucleoplasm 0.438719851318264 0.438718973414512 0 0 hPsi_site_15506 iPseU_CNN:0;iRNA_PseU:0 White blood cell count 15507 chr14 76906013 76906013 1 + G A LUSC 76906012 + 76905992 76906032 41 CCAAGCGCCTGTGCCTCGTGTGCGGGGACATTGCCTCTGGC CCAAGCGCCTGTGCCTCGTGTACGGGGACATTGCCTCTGGC < 41bp 0.535685380757891 0.887029402000014 0.35680145 0.6931793 prediction 0.702688042484245 Functional Gain - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76906012 chr14:76906013 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21783 0 0 0 0 1 Nucleus 0.43871859374946 0.438718057380771 0.3863586 0 hPsi_site_15507 iPseU_CNN:0.3863586;iRNA_PseU:0 15508 chr3 100467400 100467400 1 + G A rs183885488 100467399 + 100467379 100467419 41 GGCTCCTCTACACCAATTAATGTAGCTGCTAGCTATTGGCC GGCTCCTCTACACCAATTAATATAGCTGCTAGCTATTGGCC < 41bp 0.523480986460652 0.874815237309502 0.20948818 0.28491667 prediction 0.702668501697699 Functional Gain - TFG ENSG00000114354 UTR3 Human protein_coding chr3:100467399 chr3:100467400 . . 0 22 hPsi_associated_SNPs_21784 0 0 1 7 0 Cytosol 0.438718592934073 0.438718603580862 0 0 hPsi_site_15508 iPseU_CNN:0;iRNA_PseU:0 15509 chr19 4311905 4311905 1 + G A LUSC 4311904 + 4311884 4311924 41 ATAACTGTGTGACCCTGGTGTGGCGCATGCCGGATGAGGAC ATAACTGTGTGACCCTGGTGTAGCGCATGCCGGATGAGGAC < 41bp 0.444637829231725 0.851330847531609 0.37366882 0.74707395 prediction 0.702661695063219 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4311904 chr19:4311905 stopgain 0.973 1 22 hPsi_associated_SNPs_21785 0 0 1 0 1 cytosol 0.439704097895548 0.438718594481123 0.4941479 0 hPsi_site_15509 iPseU_CNN:0.4941479;iRNA_PseU:0 15510 chrX 37850387 37850387 1 + G A LUAD 37850386 + 37850366 37850406 41 AACCGTGAGCCCCACAGCGCTGAGAGTGATGTGACTCGCTT AACCGTGAGCCCCACAGCGCTAAGAGTGATGTGACTCGCTT < 41bp 0.493080623888033 0.851330381069513 0.31001002 0.66059697 prediction 0.702660762139027 Functional Gain - HYPM ENSG00000187516 CDS Human protein_coding chrX:37850386 chrX:37850387 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21786 0 0 0 0 0 exosome 0.436256807361464 0.441609461747085 0.32119394 0 hPsi_site_15510 iPseU_CNN:0.32119394;iRNA_PseU:0 15511 chr12 50344652 50344652 1 + G A rs61733029 50344651 + 50344631 50344671 41 CATAGCCTTCTCCAGGGCTGTGTTCGCAGAGTTCCTGGCCA CATAGCCTTCTCCAGGGCTGTATTCGCAGAGTTCCTGGCCA < 41bp 0.523435771333704 0.874757168588732 0.56890106 0.7808567 prediction 0.702642794510057 Functional Gain - AQP2 ENSG00000167580 CDS Human protein_coding chr12:50344651 chr12:50344652 synonymous SNV . 0 22 hPsi_associated_SNPs_21787 1 0 0 0 0 Ribosome 0.438718726422614 0.438719258194029 0.42391128 0 hPsi_site_15511 iPseU_CNN:0.42391128;iRNA_PseU:0 15512 chr1 32050544 32050544 1 + C A LUSC 32050543 + 32050523 32050563 41 GACACATGACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCT GACACATGACGCCTGTCCTGTAGCCCCAGAACCTGCTGTCT < 41bp 0.5030896179868 0.854404235537652 0.26651064 0.6513885 prediction 0.702629235101704 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32050543 chr1:32050544 stopgain 0.683 1 22 hPsi_associated_SNPs_21788 0 0 0 0 1 Ribosome 0.438718562184175 0.438718820958836 0.302777 0 hPsi_site_15512 iPseU_CNN:0.302777;iRNA_PseU:0 15513 chr13 113974731 113974731 1 + G A BLCA 113974730 + 113974710 113974750 41 GAGCTGCGGCGCCCACCTGGTGACTCTGGAGCTGCACAGCG GAGCTGCGGCGCCCACCTGGTAACTCTGGAGCTGCACAGCG < 41bp 0.439108255303705 0.85131394522379 0.20874402 0.7121998 prediction 0.702627890447581 Functional Gain - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113974730 chr13:113974731 synonymous SNV . 0 22 hPsi_associated_SNPs_21789 0 0 1 0 2 Cytosol 0.438718578291476 0.438719593086168 0.4243996 0 hPsi_site_15513 iPseU_CNN:0.4243996;iRNA_PseU:0 15514 chr2 26609300 26609300 1 + G A PRAD 26609299 + 26609279 26609319 41 CTGGTTCCTCTCTTCTTGGTTGTCTTAGTGGTAAACCTAGG CTGGTTCCTCTCTTCTTGGTTATCTTAGTGGTAAACCTAGG < 41bp 0.531813856619234 0.883113332926663 0.2923646 0.7950413 prediction 0.702598952614857 Functional Gain - SELENOI ENSG00000138018 CDS Human protein_coding chr2:26609299 chr2:26609300 unknown 0.807 0 22 hPsi_associated_SNPs_21790 0 0 1 0 0 unknown 0.438718593074446 0.43871859296224 0.5900826 0 hPsi_site_15514 iPseU_CNN:0.5900826;iRNA_PseU:0 15515 chr8 146220599 146220599 1 + G A HNSC 146220598 + 146220578 146220618 41 GACATGTTTGAAGTGTGTTTTGAGAGCAAGGAAACAGGGCA GACATGTTTGAAGTGTGTTTTAAGAGCAAGGAAACAGGGCA < 41bp 0.503388677479282 0.854684776096639 0.3473512 0.48367128 prediction 0.702592197234714 Functional Gain - TMED10P1 ENSG00000196922;ENSG00000254618 ncRNA_exonic Human other chr8:146220598 chr8:146220599 . . 0 22 hPsi_associated_SNPs_21791 0 0 1 0 0 unknown 0.438557540544874 0.438723403509416 0 0 hPsi_site_15515 iPseU_CNN:0;iRNA_PseU:0 15516 chr1 248085070 248085070 1 + G A LGG 248085069 + 248085049 248085089 41 GCTGTGGTGGGACTCTTTTATGGAGCTGCCATTTTTACCTA GCTGTGGTGGGACTCTTTTATAGAGCTGCCATTTTTACCTA < 41bp 0.487854914638645 0.851295925957185 0.19436175 0.25482422 prediction 0.70259185191437 Functional Gain - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248085069 chr1:248085070 nonsynonymous SNV 0.051 3 22 hPsi_associated_SNPs_21792 0 0 0 0 0 exosome 0.438718517575178 0.438157263312691 0 0 hPsi_site_15516 iPseU_CNN:0;iRNA_PseU:0 15517 chr11 57427024 57427024 1 + G A LUAD 57427023 + 57427003 57427043 41 CGAGAAACAGAACTTCGCTTTGAGGTGGAGGCATCTCAGTC CGAGAAACAGAACTTCGCTTTAAGGTGGAGGCATCTCAGTC < 41bp 0.530090739797693 0.881385674914088 0.3443495 0.4348765 prediction 0.702589870232792 Functional Gain - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427023 chr11:57427024 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21793 0 0 1 0 2 Cytosol 0.438718565044451 0.433891985806272 0 0 hPsi_site_15517 iPseU_CNN:0;iRNA_PseU:0 15518 chr8 145138622 145138622 1 + G A rs139167765 145138621 + 145138601 145138641 41 CCGATGCTGCATACAGATGGTGTCGGGCACCAACGTGTACG CCGATGCTGCATACAGATGGTATCGGGCACCAACGTGTACG < 41bp 0.460727583858421 0.851293713918637 0.31868088 0.8250865 prediction 0.702587427837274 Functional Gain - GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145138621 chr8:145138622 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21794 0 0 1 0 1 Endoplasmic reticulum 0.438715827613836 0.438713242260183 0.650173 0 hPsi_site_15518 iPseU_CNN:0.650173;iRNA_PseU:0 15519 chr1 119964767 119964767 1 + G A SKCM 119964766 + 119964746 119964786 41 AATGGGATCCTGTCAAGTGTTGGAAAGTTCTCTACAGTCAA AATGGGATCCTGTCAAGTGTTAGAAAGTTCTCTACAGTCAA < 41bp 0.490249597918702 0.851285242765366 0.3198809 0.41519928 prediction 0.702570485530731 Functional Gain - HSD3B2 ENSG00000203859 CDS Human protein_coding chr1:119964766 chr1:119964767 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_21795 0 0 0 0 0 unknown 0.438718592988614 0.438720973781037 0 0 hPsi_site_15519 iPseU_CNN:0;iRNA_PseU:0 15520 chr15 41102125 41102125 1 + G A UCEC 41102124 + 41102104 41102144 41 ACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCAC ACTGACACGACAAGACCAGATAATTGCTGAGCGCCTAGCAC < 41bp 0.537420437866698 0.88869913390379 0.33995765 0.66841346 prediction 0.702557392074184 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41102124 chr15:41102125 nonsynonymous SNV 0.929 0 22 hPsi_associated_SNPs_21796 0 0 1 0 2 Ribosome 0.438724748743978 0.43828714379259 0.33682692 0 hPsi_site_15520 iPseU_CNN:0.33682692;iRNA_PseU:0 15521 chr6 127901535 127901535 1 + G A rs61998166 127901534 + 127901514 127901554 41 GAGAGGAAGTTTTGTTATGATGTTTCTAGCTGTCGTTCATC GAGAGGAAGTTTTGTTATGATATTTCTAGCTGTCGTTCATC < 41bp 0.523592437313658 0.874869844160181 0.23681629 0.3200633 prediction 0.702554813693048 Functional Gain - C6orf58 ENSG00000184530 CDS Human protein_coding chr6:127901534 chr6:127901535 nonsynonymous SNV 0.964 1 22 hPsi_associated_SNPs_21797 0 0 0 0 1 exosome 0.438718628934463 0.438718641755847 0 0 hPsi_site_15521 iPseU_CNN:0;iRNA_PseU:0 15522 chr1 27190009 27190009 1 + G A COAD 27190008 + 27189988 27190028 41 GTGCGACACCGTGCTGGGCCTGCTGGACAGCCACCTCATCA GTGCGACACCGTGCTGGGCCTACTGGACAGCCACCTCATCA < 41bp 0.482979800087295 0.851275208058378 0.21581295 0.57538164 prediction 0.702550416116756 Functional Gain - SFN ENSG00000175793 CDS Human protein_coding chr1:27190008 chr1:27190009 synonymous SNV . 0 22 hPsi_associated_SNPs_21798 0 0 0 0 0 Ribosome 0.438805379491715 0.438731019761047 0.15076328 0 hPsi_site_15522 iPseU_CNN:0.15076328;iRNA_PseU:0 15523 chr19 2807010 2807010 1 + G A BLCA 2807009 + 2806989 2807029 41 CGCCGACTATGTCCTGGAGATGAACATGGCCAAGACCAGCC CGCCGACTATGTCCTGGAGATAAACATGGCCAAGACCAGCC < 41bp 0.450934638590622 0.851270928964764 0.23955515 0.53849626 prediction 0.702541857929527 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2807009 chr19:2807010 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21799 0 0 1 0 2 Ribosome 0.438601511424131 0.438717449301779 0.0769925199999999 0 hPsi_site_15523 iPseU_CNN:0.0769925199999999;iRNA_PseU:0 15524 chr5 140554009 140554009 1 + G A LUAD 140554008 + 140553988 140554028 41 GCAGGCGTTCGAGTTCCGCGTGGGCGCCACAGACCGCGGCT GCAGGCGTTCGAGTTCCGCGTAGGCGCCACAGACCGCGGCT < 41bp 0.468102993210308 0.851269782314525 0.23332465 0.81542337 prediction 0.702539564629049 Functional Gain - PCDHB7 ENSG00000113212 CDS Human protein_coding chr5:140554008 chr5:140554009 synonymous SNV . 0 22 hPsi_associated_SNPs_21800 0 0 0 0 0 exosome 0.433492322314135 0.432047874789713 0.63084674 0 hPsi_site_15524 iPseU_CNN:0.63084674;iRNA_PseU:0 15525 chr16 82101819 82101819 1 + G A BLCA 82101818 + 82101798 82101838 41 GCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATT GCTTTGTGCAAGTATCTGGATAAGCTGGGCTTCACGGTATT < 41bp 0.538745854738507 0.890013742717385 0.36009067 0.6392477 prediction 0.702535775957758 Functional Gain - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82101818 chr16:82101819 nonsynonymous SNV 0.400 0 22 hPsi_associated_SNPs_21801 0 0 1 0 1 nucleus 0.438705000495944 0.438718773293475 0.2784954 0 hPsi_site_15525 iPseU_CNN:0.2784954;iRNA_PseU:0 15526 chr2 33037602 33037602 1 + G A UCEC 33037601 + 33037581 33037621 41 GCCTCTCAAAGGCATACAAGTGTGACACCCAGTCCAATTGT GCCTCTCAAAGGCATACAAGTATGACACCCAGTCCAATTGT < 41bp 0.4671526491402 0.85125122184604 0.2692447 0.40109158 prediction 0.702502443692079 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33037601 chr2:33037602 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21802 0 0 1 0 2 Nucleus 0.438718732072124 0.438718604591431 0 0 hPsi_site_15526 iPseU_CNN:0;iRNA_PseU:0 15527 chr1 47534369 47534369 1 + G A SKCM 47534368 + 47534348 47534388 41 TGTGCTGTTCCCTTGTGGGTTGGACCCTTTACGATGTTCTT TGTGCTGTTCCCTTGTGGGTTAGACCCTTTACGATGTTCTT < 41bp 0.518707768955997 0.869955676968767 0.6343695 0.7934382 prediction 0.702495816025539 Functional Gain - CYP4Z1 ENSG00000186160 CDS Human protein_coding chr1:47534368 chr1:47534369 nonsynonymous SNV 0.096 1 22 hPsi_associated_SNPs_21803 0 0 0 0 2 exosome 0.438710948927184 0.43874399106867 0.3181374 0 hPsi_site_15527 iPseU_CNN:0.3181374;iRNA_PseU:0 15528 chr19 34900348 34900348 1 + G A STAD 34900347 + 34900327 34900367 41 GACTTTGTCAACCTGGATCATGCCCACAGCCTTCTGAGGGA GACTTTGTCAACCTGGATCATACCCACAGCCTTCTGAGGGA < 41bp 0.452877793261645 0.851246688294355 0.23328677 0.39506328 prediction 0.70249337658871 Functional Gain - PDCD2L ENSG00000126249 CDS Human protein_coding chr19:34900347 chr19:34900348 nonsynonymous SNV 0.596 4 22 hPsi_associated_SNPs_21804 0 0 1 0 1 Ribosome 0.438711262896215 0.438584527447763 0 0 hPsi_site_15528 iPseU_CNN:0;iRNA_PseU:0 15529 chr16 5135655 5135655 1 + G A UCEC 5135654 + 5135634 5135674 41 TACAGGGTGAGATTCAGCATTGCCATCTCCAAGTGCTCTTC TACAGGGTGAGATTCAGCATTACCATCTCCAAGTGCTCTTC < 41bp 0.52878550233603 0.880030899689676 0.42113295 0.563827 prediction 0.702490794707291 Functional Gain - EEF2KMT ENSG00000118894 CDS Human protein_coding chr16:5135654 chr16:5135655 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_21805 0 0 0 0 0 Endoplasmic reticulum 0.438879361363372 0.438470778393671 0.127654 0 hPsi_site_15529 iPseU_CNN:0.127654;iRNA_PseU:0 15530 chr1 247751877 247751877 1 + G A STAD 247751876 + 247751856 247751896 41 CCTTTCTCATCTCTCCTTCCTGTACCGCTGCTTCACCAGCA CCTTTCTCATCTCTCCTTCCTATACCGCTGCTTCACCAGCA < 41bp 0.486262533592675 0.851239571825017 0.24252132 0.4487181 prediction 0.702479143650034 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247751876 chr1:247751877 synonymous SNV . 0 22 hPsi_associated_SNPs_21806 0 0 0 0 0 unknown 0.438718592870931 0.43871859327759 0 0 hPsi_site_15530 iPseU_CNN:0;iRNA_PseU:0 15531 chr7 19184814 19184814 1 + C T BLCA 19184815 - 19184795 19184835 41 CCCAGGAGGATGGCGCGGTTTGAAGAGGGGGACCCAGAAGA CCCAGGAGGATGGCGCGGTTTAAAGAGGGGGACCCAGAAGA < 41bp 0.514975920804179 0.866204150826954 0.29241115 0.62644345 prediction 0.702456460045549 Functional Gain - FERD3L ENSG00000146618 CDS Human protein_coding chr7:19184815 chr7:19184814 nonsynonymous SNV 0.071 1 22 hPsi_associated_SNPs_21807 0 0 0 0 0 unknown 0.438718592995102 0.438718592995108 0.2528869 0 hPsi_site_15531 iPseU_CNN:0.2528869;iRNA_PseU:0 15532 chr4 89571092 89571092 1 + G A PAAD 89571091 + 89571071 89571111 41 GGCCAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAGCT GGCCAGCTGTTTTCTTGGGGTACAGGGAGTGATGGTCAGCT < 41bp 0.455044000527466 0.851227553526863 0.1212149 0.25491905 prediction 0.702455107053726 Functional Gain - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89571091 chr4:89571092 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21808 0 0 1 0 1 Ribosome 0.4387185929951 0.438718592995093 0 0 hPsi_site_15532 iPseU_CNN:0;iRNA_PseU:0 15533 chr1 155156586 155156586 1 + G A SKCM 155156585 + 155156565 155156605 41 GCCTTTTGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGA GCCTTTTGCTTCATCGGGGGTAGCGCAGTACAGCTCCAGGA < 41bp 0.47006510674961 0.851223151558613 0.21242067 0.33149594 prediction 0.702446303117226 Functional Gain - TRIM46 ENSG00000163462 CDS Human protein_coding chr1:155156585 chr1:155156586 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_21809 0 0 0 0 0 nucleolus 0.438718415650749 0.438718762714409 0 0 hPsi_site_15533 iPseU_CNN:0;iRNA_PseU:0 15534 chr7 154863050 154863050 1 + G A SKCM 154863049 + 154863029 154863069 41 CTGGTCCATCACGCGCCACATGGAATACACGCTCCGCACCC CTGGTCCATCACGCGCCACATAGAATACACGCTCCGCACCC < 41bp 0.465715396861952 0.851220401857448 0.3846676 0.84635836 prediction 0.702440803714896 Functional Gain - HTR5A ENSG00000157219 CDS Human protein_coding chr7:154863049 chr7:154863050 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_21810 0 0 0 0 0 exosome 0.438718591817433 0.43871839677345 0.69271672 0 hPsi_site_15534 iPseU_CNN:0.69271672;iRNA_PseU:0 15535 chr17 39261684 39261684 1 + G A UCEC 39261683 + 39261663 39261703 41 CCGTGTGCTCTGACCAGGGCTGCGGCCAAGACCTCTGTCAG CCGTGTGCTCTGACCAGGGCTACGGCCAAGACCTCTGTCAG < 41bp 0.514948671716822 0.866166634573263 0.19918069 0.3314342 prediction 0.702435925712882 Functional Gain - KRTAP4-9 ENSG00000212722 CDS Human protein_coding chr17:39261683 chr17:39261684 nonsynonymous SNV 0.132 1 22 hPsi_associated_SNPs_21811 0 0 0 0 0 unknown 0.43871903563642 0.43871933360182 0 0 hPsi_site_15535 iPseU_CNN:0;iRNA_PseU:0 15536 chr1 201981243 201981243 1 + G A BLCA 201981242 + 201981222 201981262 41 ACCCTCTGCAATTGTGCCCTTGAGGAGCTGCGTCTGGTCTT ACCCTCTGCAATTGTGCCCTTAAGGAGCTGCGTCTGGTCTT < 41bp 0.450340714512816 0.851217671627907 0.33249244 0.47519386 prediction 0.702435343255813 Functional Gain - ELF3 ENSG00000163435 CDS Human protein_coding chr1:201981242 chr1:201981243 nonsynonymous SNV 0.963 2 22 hPsi_associated_SNPs_21812 0 0 1 0 1 Endoplasmic reticulum 0.438718592972769 0.438718592994913 0 0 hPsi_site_15536 iPseU_CNN:0;iRNA_PseU:0 15537 chr3 12545048 12545048 1 + G A SKCM 12545047 + 12545027 12545067 41 GCCTGCAGGAGGGCTCTGGCTGCCACCCAACAACAGAGAGC GCCTGCAGGAGGGCTCTGGCTACCACCCAACAACAGAGAGC < 41bp 0.454837293438367 0.851211362527932 0.14356425 0.34797737 prediction 0.702422725055865 Functional Gain - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12545047 chr3:12545048 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21813 0 0 1 0 0 Nucleus 0.428177611722835 0.436743082497117 0 0 hPsi_site_15537 iPseU_CNN:0;iRNA_PseU:0 15538 chr1 156879832 156879832 1 + G A KIRP 156879831 + 156879811 156879851 41 GAGAAGGTTGTGCCAGTCGCTGTGACTGTGACCACTCTGAT GAGAAGGTTGTGCCAGTCGCTATGACTGTGACCACTCTGAT < 41bp 0.444368086366637 0.851207673630213 0.27911168 0.5564453 prediction 0.702415347260427 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156879831 chr1:156879832 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_21814 0 0 0 0 2 cytosol 0.439295431660857 0.43873346898053 0.1128906 0 hPsi_site_15538 iPseU_CNN:0.1128906;iRNA_PseU:0 15539 chr11 55798152 55798152 1 + G A rs1482011 55798151 + 55798131 55798171 41 TAAAATGCTGGCAAACTTCTTGGCATCCAGGAAAAGCATCT TAAAATGCTGGCAAACTTCTTAGCATCCAGGAAAAGCATCT < 41bp 0.4921195405051 0.851203800173459 0.21526897 0.31460354 prediction 0.702407600346918 Functional Gain - OR5AS1 ENSG00000181785 CDS Human protein_coding chr11:55798151 chr11:55798152 synonymous SNV . 0 22 hPsi_associated_SNPs_21815 0 0 0 0 0 unknown 0.438746683178106 0.414901133574412 0 0 hPsi_site_15539 iPseU_CNN:0;iRNA_PseU:0 15540 chr18 72998280 72998280 1 + G A THYM 72998279 + 72998259 72998299 41 GAAGGAGGATGCCCAGAAGGTGCTGAAGTGCATGTACTGTG GAAGGAGGATGCCCAGAAGGTACTGAAGTGCATGTACTGTG < 41bp 0.454922295152791 0.851203430777578 0.20997882 0.57147735 prediction 0.702406861555155 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998279 chr18:72998280 synonymous SNV . 0 22 hPsi_associated_SNPs_21816 0 0 1 0 0 Cytosol 0.438719215432909 0.438725387237316 0.1429547 0 hPsi_site_15540 iPseU_CNN:0.1429547;iRNA_PseU:0 15541 chr13 42784863 42784863 1 + G A SARC 42784862 + 42784842 42784882 41 AACAGAAGAGGTGTCGCAGATGCAGCTATGCTCCCAGGCTG AACAGAAGAGGTGTCGCAGATACAGCTATGCTCCCAGGCTG < 41bp 0.467969341506613 0.851196432282112 0.41602647 0.6867677 prediction 0.702392864564223 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42784862 chr13:42784863 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_21817 0 0 0 0 1 chromatin 0.437897224802142 0.43834515902845 0.3735354 0 hPsi_site_15541 iPseU_CNN:0.3735354;iRNA_PseU:0 15542 chr7 75614954 75614954 1 + G A LUSC 75614953 + 75614933 75614973 41 GTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCGT GTGGAGTACGAGACCAAGGCTAGCCGCATCAACAAGGGCGT < 41bp 0.533349444763696 0.884545142940694 0.21571818 0.28572375 prediction 0.702391396353995 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75614953 chr7:75614954 nonsynonymous SNV 0.049 1 22 hPsi_associated_SNPs_21818 0 0 1 0 1 Nucleus 0.438718636668656 0.438724255974886 0 0 hPsi_site_15542 iPseU_CNN:0;iRNA_PseU:0 15543 chr9 33624899 33624899 1 + G A rs148785785 33624898 + 33624878 33624918 41 GTGAAGAGGAAAGGAACTGATGTTCCCAAGTGGATCAGCAT GTGAAGAGGAAAGGAACTGATATTCCCAAGTGGATCAGCAT < 41bp 0.476763067587304 0.851180673253512 0.31221718 0.57780606 prediction 0.702361346507024 Functional Gain - ANXA2P2 ENSG00000231991 ncRNA_exonic Human processed_pseudogene chr9:33624898 chr9:33624899 . . 0 22 hPsi_associated_SNPs_21819 0 0 0 0 0 unknown 0.438718464623757 0.438718678896583 0.15561212 0 hPsi_site_15543 iPseU_CNN:0.15561212;iRNA_PseU:0 15544 chr8 94730972 94730972 1 + G A UCEC 94730971 + 94730951 94730991 41 GCTTTAGAGGTCTACACTGCTGCCTACCAGAATATACAAAA GCTTTAGAGGTCTACACTGCTACCTACCAGAATATACAAAA < 41bp 0.507775690924998 0.858953285331583 0.17547852 0.297517 prediction 0.70235518881317 Functional Gain - FAM92A ENSG00000188343 CDS Human protein_coding chr8:94730971 chr8:94730972 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21820 0 0 0 1 2 unknown 0.438682437393727 0.43849256870829 0 0 hPsi_site_15544 iPseU_CNN:0;iRNA_PseU:0 15545 chr1 100487987 100487987 1 + G A rs139479346 100487986 + 100487966 100488006 41 TGTAATAACAGCTACTTTTTTGTATGGTTATGATCCCAAAC TGTAATAACAGCTACTTTTTTATATGGTTATGATCCCAAAC < 41bp 0.495647774064884 0.85116949962702 0.37451002 0.65152395 prediction 0.702338999254039 Functional Gain - SLC35A3 ENSG00000117620 CDS Human protein_coding chr1:100487986 chr1:100487987 synonymous SNV . 0 22 hPsi_associated_SNPs_21821 0 0 1 0 0 Endoplasmic reticulum 0.438718581044561 0.438718574707107 0.3030479 0 hPsi_site_15545 iPseU_CNN:0.3030479;iRNA_PseU:0 15546 chr12 110017675 110017675 1 + G A LUAD 110017674 + 110017654 110017694 41 AAGGAGGTTGCAGGCTTGCCTGACGACTGTGCTGTCACCGA AAGGAGGTTGCAGGCTTGCCTAACGACTGTGCTGTCACCGA < 41bp 0.456285291712842 0.85116721115628 0.23951614 0.32504565 prediction 0.70233442231256 Functional Gain - MVK ENSG00000110921 CDS Human protein_coding chr12:110017674 chr12:110017675 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_21822 0 0 0 0 2 Ribosome 0.438718012210203 0.438714820370962 0 0 hPsi_site_15546 iPseU_CNN:0;iRNA_PseU:0 15547 chr12 51158284 51158284 1 + G A rs115016261 51158283 + 51158263 51158303 41 TCCGCGCCTCGGTGCAGAGCTGCGCTGCGCCCTTCCAGTCG TCCGCGCCTCGGTGCAGAGCTACGCTGCGCCCTTCCAGTCG < 41bp 0.510429014772389 0.861591704493466 0.24250537 0.7788526 prediction 0.702325379442154 Functional Gain - ATF1 ENSG00000123268 UTR5 Human protein_coding chr12:51158283 chr12:51158284 . . 0 22 hPsi_associated_SNPs_21823 0 0 1 0 1 Cytosol 0.439216751459646 0.442217184060932 0.5577052 0 hPsi_site_15547 iPseU_CNN:0.5577052;iRNA_PseU:0 15548 chr5 178391770 178391770 1 + G A BLCA 178391769 + 178391749 178391789 41 GTAGCAGTAGTCACTGGAAGTGTGCTAGCCTGCTGGAGTGG GTAGCAGTAGTCACTGGAAGTATGCTAGCCTGCTGGAGTGG < 41bp 0.473400999667935 0.851158439205228 0.3191172 0.45594564 prediction 0.702316878410457 Functional Gain - ZNF454 ENSG00000178187 CDS Human protein_coding chr5:178391769 chr5:178391770 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_21824 0 0 0 0 0 exosome 0.438870049494451 0.438653731383922 0 0 hPsi_site_15548 iPseU_CNN:0;iRNA_PseU:0 15549 chr2 20870531 20870531 1 + G A rs192407174 20870530 + 20870510 20870550 41 CCCCCGCGCGTTCTGCCTCTTGCTGCGCGCAGTGGCAGGCC CCCCCGCGCGTTCTGCCTCTTACTGCGCGCAGTGGCAGGCC < 41bp 0.515719523090682 0.866875264885273 0.37865132 0.90371615 prediction 0.702311483589183 Functional Gain - GDF7 ENSG00000143869 CDS Human protein_coding chr2:20870530 chr2:20870531 synonymous SNV . 0 22 hPsi_associated_SNPs_21825 0 0 1 0 0 exosome 0.438724919924451 0.438718592938501 0.8074323 0 hPsi_site_15549 iPseU_CNN:0.8074323;iRNA_PseU:0 15550 chr15 75500822 75500822 1 + G A rs150566462 75500821 + 75500801 75500841 41 GTGGCAGGACTGCCAGGGTGTGCAGGGGCTGCTGGCCAAGC GTGGCAGGACTGCCAGGGTGTACAGGGGCTGCTGGCCAAGC < 41bp 0.528491493775863 0.879642508717148 0.3024289 0.65330577 prediction 0.702302029882568 Functional Gain - C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75500821 chr15:75500822 synonymous SNV . 0 22 hPsi_associated_SNPs_21826 0 0 1 0 0 Cytosol 0.438717644350568 0.438714394953384 0.30661154 0 hPsi_site_15550 iPseU_CNN:0.30661154;iRNA_PseU:0 15551 chr11 62434497 62434497 1 + G A LAML 62434496 + 62434476 62434516 41 TTCAGGGGCATCACCTACTTTGCTTACTTGATTCAAGGCTC TTCAGGGGCATCACCTACTTTACTTACTTGATTCAAGGCTC < 41bp 0.473724982632577 0.851148702393877 0.2322788 0.3138973 prediction 0.702297404787753 Functional Gain - METTL12 ENSG00000214756 CDS Human protein_coding chr11:62434496 chr11:62434497 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_21827 0 0 0 3 0 Cytosol 0.438716101072634 0.438658833977434 0 0 hPsi_site_15551 iPseU_CNN:0;iRNA_PseU:0 15552 chr4 134073583 134073583 1 + G A COAD 134073582 + 134073562 134073602 41 GCTGCCTCTGCTGCTGCTGCTGCGGTGGCGGAGGTTCGACC GCTGCCTCTGCTGCTGCTGCTACGGTGGCGGAGGTTCGACC < 41bp 0.463553490748124 0.85112971475401 0.25562817 0.4304067 prediction 0.70225942950802 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073582 chr4:134073583 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_21828 0 0 0 0 0 cytosol 0.438713223590385 0.438718310880923 0 0 hPsi_site_15552 iPseU_CNN:0;iRNA_PseU:0 15553 chr16 71571069 71571069 1 + G A SKCM 71571068 + 71571048 71571088 41 CAGTCAACAGCCCTTTGAGGTGGTGGAGAAGGCCTGCCGCT CAGTCAACAGCCCTTTGAGGTAGTGGAGAAGGCCTGCCGCT < 41bp 0.44507266640617 0.851126116497205 0.30600083 0.6416118 prediction 0.70225223299441 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71571068 chr16:71571069 synonymous SNV . 0 22 hPsi_associated_SNPs_21829 0 0 0 0 0 exosome 0.438649767546443 0.438694705848962 0.2832236 0 hPsi_site_15553 iPseU_CNN:0.2832236;iRNA_PseU:0 15554 chr12 96356187 96356187 1 + G A CESC 96356186 + 96356166 96356206 41 CACCTGGAAGAAGTGAGTGATGAAGGCATCGTTGCCATGGC CACCTGGAAGAAGTGAGTGATAAAGGCATCGTTGCCATGGC < 41bp 0.53873558396696 0.889855967996308 0.25799167 0.3438893 prediction 0.702240768058697 Functional Gain - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96356186 chr12:96356187 nonsynonymous SNV 0.577 1 22 hPsi_associated_SNPs_21830 0 0 0 0 2 Cytosol 0.442802775605738 0.438766527798351 0 0 hPsi_site_15554 iPseU_CNN:0;iRNA_PseU:0 15555 chr19 58101402 58101402 1 + G A LUAD 58101401 + 58101381 58101421 41 TGTGGCCATGGAACAGAGGATGAAGAGACACCTTCTGACCA TGTGGCCATGGAACAGAGGATAAAGAGACACCTTCTGACCA < 41bp 0.473842821821187 0.851109214610229 0.30723315 0.7266184 prediction 0.702218429220457 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101401 chr19:58101402 nonsynonymous SNV 0.103 1 22 hPsi_associated_SNPs_21831 0 0 1 0 1 exosome 0.449088509987148 0.441706181126423 0.4532368 0 hPsi_site_15555 iPseU_CNN:0.4532368;iRNA_PseU:0 15556 chr5 121187661 121187661 1 + G A LUSC 121187660 + 121187640 121187680 41 CTTCCAAGGAGGCGGCGCTATGCTGTCCTGCTTCAGGCTCC CTTCCAAGGAGGCGGCGCTATACTGTCCTGCTTCAGGCTCC < 41bp 0.500440411479508 0.851503009518438 0.42808732 0.8079342 prediction 0.70212519607786 Functional Gain - FTMT ENSG00000181867 CDS Human protein_coding chr5:121187660 chr5:121187661 nonsynonymous SNV 0.094 2 22 hPsi_associated_SNPs_21832 0 0 0 0 0 unknown 0.438718771001203 0.438723664212787 0.6158684 0 hPsi_site_15556 iPseU_CNN:0.6158684;iRNA_PseU:0 15557 chr7 127894579 127894579 1 + G A LUSC 127894578 + 127894558 127894598 41 CCAACAGATCCTCACCAGTATGCCTTCCAGAAACGTGATCC CCAACAGATCCTCACCAGTATACCTTCCAGAAACGTGATCC < 41bp 0.463366336693185 0.851060520887696 0.40638244 0.64214647 prediction 0.702121041775391 Functional Gain - LEP ENSG00000174697 CDS Human protein_coding chr7:127894578 chr7:127894579 nonsynonymous SNV 0.423 1 22 hPsi_associated_SNPs_21833 0 0 0 0 0 exosome 0.438718593020113 0.438718592972449 0.28429294 0 hPsi_site_15557 iPseU_CNN:0.28429294;iRNA_PseU:0 15558 chr9 125316240 125316240 1 + G A rs71511510 125316239 + 125316219 125316259 41 CTGTGGTTCTCATCTCACGGTGGTTCTGCTCTTCTATGGGT CTGTGGTTCTCATCTCACGGTAGTTCTGCTCTTCTATGGGT < 41bp 0.490038088775159 0.851060348845591 0.18395355 0.75211 prediction 0.702120697691183 Functional Gain - OR1N2 ENSG00000171501 CDS Human protein_coding chr9:125316239 chr9:125316240 synonymous SNV . 0 22 hPsi_associated_SNPs_21834 0 0 0 0 0 unknown 0.43871859300167 0.438718599635871 0.50422 0 hPsi_site_15558 iPseU_CNN:0.50422;iRNA_PseU:0 15559 chr12 48920016 48920016 1 + G A CESC 48920015 + 48919995 48920035 41 GAAGCCTCATCGCCTTGCTCTGCTCCACTCTCCTACATGGG GAAGCCTCATCGCCTTGCTCTACTCCACTCTCCTACATGGG < 41bp 0.532977162865597 0.884030849927376 0.46250924 0.8233227 prediction 0.702107374123558 Functional Gain - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48920015 chr12:48920016 nonsynonymous SNV 0.915 0 22 hPsi_associated_SNPs_21835 0 0 0 0 0 unknown 0.438718597052664 0.438718593070271 0.6466454 0 hPsi_site_15559 iPseU_CNN:0.6466454;iRNA_PseU:0 15560 chr20 30418882 30418882 1 + G A LUAD 30418881 + 30418861 30418901 41 GTTCCTGTCACCTGAGGTGGTGAATTATGACCAAATCTCCG GTTCCTGTCACCTGAGGTGGTAAATTATGACCAAATCTCCG < 41bp 0.449944897683435 0.851046308540136 0.27779016 0.41355348 prediction 0.702092617080271 Functional Gain - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30418881 chr20:30418882 synonymous SNV . 0 22 hPsi_associated_SNPs_21836 0 0 0 1 1 exosome 0.438698876311752 0.438719130800396 0 0 hPsi_site_15560 iPseU_CNN:0;iRNA_PseU:0 15561 chr17 26821461 26821461 1 + G A UCEC 26821460 + 26821440 26821480 41 CCTCCTCGACTGGAAGACGGTGAACCAGAAGATGCCGTGGA CCTCCTCGACTGGAAGACGGTAAACCAGAAGATGCCGTGGA < 41bp 0.438742561242794 0.851042774194833 0.29756415 0.6407914 prediction 0.702085548389666 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26821460 chr17:26821461 synonymous SNV . 0 22 hPsi_associated_SNPs_21837 0 0 0 0 2 unknown 0.439187884055303 0.440061250150975 0.2815828 0 hPsi_site_15561 iPseU_CNN:0.2815828;iRNA_PseU:0 15562 chr11 123900572 123900572 1 + G A LUSC 123900571 + 123900551 123900591 41 CACGGTGCCCAAATTGCTGATGACTTTGGTGTTCCCAAGTG CACGGTGCCCAAATTGCTGATAACTTTGGTGTTCCCAAGTG < 41bp 0.520019523948933 0.871060439732269 0.21866465 0.3126464 prediction 0.702081831566671 Functional Gain - OR10G8 ENSG00000234560 CDS Human protein_coding chr11:123900571 chr11:123900572 nonsynonymous SNV 0.809 2 22 hPsi_associated_SNPs_21838 0 0 0 0 0 unknown 0.438718602640588 0.438718539624276 0 0 hPsi_site_15562 iPseU_CNN:0;iRNA_PseU:0 15563 chr6 88776030 88776030 1 + G A UCEC 88776029 + 88776009 88776049 41 GAAATGCCTGGTGAAGATGATGCTTTAAGTGAATGGAATGA GAAATGCCTGGTGAAGATGATACTTTAAGTGAATGGAATGA < 41bp 0.507287406143221 0.858324266141242 0.36437196 0.6838438 prediction 0.702073719996041 Functional Gain - SPACA1 ENSG00000118434 CDS Human protein_coding chr6:88776029 chr6:88776030 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21839 0 0 0 0 0 unknown 0.438665878251505 0.433745706801515 0.3676876 0 hPsi_site_15563 iPseU_CNN:0.3676876;iRNA_PseU:0 15564 chr5 140588963 140588963 1 + G A UCEC 140588962 + 140588942 140588982 41 GAAAGTGCAAAGGATTTAGATGTAGGAATCAATGCTGTAAA GAAAGTGCAAAGGATTTAGATATAGGAATCAATGCTGTAAA < 41bp 0.485439636894781 0.851034347291329 0.2816178 0.2958899 prediction 0.702068694582658 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140588962 chr5:140588963 nonsynonymous SNV 0.911 0 22 hPsi_associated_SNPs_21840 0 0 0 0 0 exosome 0.438269645860298 0.436245756244672 0 0 hPsi_site_15564 iPseU_CNN:0;iRNA_PseU:0 15565 chr19 33666314 33666314 1 + G A UCEC 33666313 + 33666293 33666333 41 CCATGTCAGTGCGAAAGATGTGACAGGCCTTTCTCCATCTT CCATGTCAGTGCGAAAGATGTAACAGGCCTTTCTCCATCTT < 41bp 0.477015085023179 0.851023056729941 0.239252 0.7041479 prediction 0.702046113459883 Functional Gain - WDR88 ENSG00000166359 CDS Human protein_coding chr19:33666313 chr19:33666314 nonsynonymous SNV 0.085 0 22 hPsi_associated_SNPs_21841 0 0 0 0 1 exosome 0.43874618199804 0.439180543236834 0.4082958 0 hPsi_site_15565 iPseU_CNN:0.4082958;iRNA_PseU:0 15566 chr9 84605839 84605839 1 + G A LUAD 84605838 + 84605818 84605858 41 TCTTGGGAGTCCCTGAAAGATGCTGCTCCCTCTGTGTCCCC TCTTGGGAGTCCCTGAAAGATACTGCTCCCTCTGTGTCCCC < 41bp 0.466471740446564 0.851004712183122 0.24137568 0.3864625 prediction 0.702009424366244 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84605838 chr9:84605839 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_21842 0 0 0 0 0 exosome 0.438549820821412 0.438926263285872 0 0 hPsi_site_15566 iPseU_CNN:0;iRNA_PseU:0 15567 chr2 95541464 95541464 1 + G A rs115769233 95541463 + 95541443 95541483 41 GCACCGGCCCAACATGGAGCTGTGCCGTGACGCAGCCCAGT GCACCGGCCCAACATGGAGCTATGCCGTGACGCAGCCCAGT < 41bp 0.531226381404142 0.882227155174537 0.36532873 0.625581 prediction 0.702001547540789 Functional Gain - TEKT4 ENSG00000163060 CDS Human protein_coding chr2:95541463 chr2:95541464 synonymous SNV . 0 22 hPsi_associated_SNPs_21843 0 0 0 0 1 chromatin 0.438627364147165 0.439925094432373 0.251162 0 hPsi_site_15567 iPseU_CNN:0.251162;iRNA_PseU:0 15568 chr19 9362107 9362107 1 + G A SKCM 9362106 + 9362086 9362126 41 GTCCTTTTTGCATGTATGGATGACATGCTCCTGAGTGTGAT GTCCTTTTTGCATGTATGGATAACATGCTCCTGAGTGTGAT < 41bp 0.487485856710913 0.850990178742804 0.2868832 0.46338773 prediction 0.701980357485607 Functional Gain - OR7E24 ENSG00000237521 CDS Human protein_coding chr19:9362106 chr19:9362107 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21844 0 0 0 0 0 unknown 0.438701435731493 0.438757758359655 0 0 hPsi_site_15568 iPseU_CNN:0;iRNA_PseU:0 15569 chr15 23811706 23811706 1 + G A STAD 23811705 + 23811685 23811725 41 CTTTCGTGGGGAGAGCTGTATGTACCTCCATGGAGACATAT CTTTCGTGGGGAGAGCTGTATATACCTCCATGGAGACATAT < 41bp 0.523021570114747 0.873997541730468 0.58894825 0.7283649 prediction 0.701951943231441 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811705 chr15:23811706 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21845 0 0 1 0 0 chromatin 0.438719981098675 0.438718446746085 0.2788333 0 hPsi_site_15569 iPseU_CNN:0.2788333;iRNA_PseU:0 15570 chr2 241808728 241808728 1 + G A SKCM 241808727 + 241808707 241808747 41 CCTGGGGACTCCTTCCTGGTTGGGGCCAATGGCATTTGGGG CCTGGGGACTCCTTCCTGGTTAGGGCCAATGGCATTTGGGG < 41bp 0.53472598540094 0.885701177867155 0.36235029 0.81752336 prediction 0.701950384932429 Functional Gain - AGXT ENSG00000172482 CDS Human protein_coding chr2:241808727 chr2:241808728 nonsynonymous SNV 0.472 5 22 hPsi_associated_SNPs_21846 0 0 1 0 1 Cytosol 0.438718592995102 0.438718501057239 0.63504672 0 hPsi_site_15570 iPseU_CNN:0.63504672;iRNA_PseU:0 15571 chr1 206821905 206821905 1 + G A BLCA 206821904 + 206821884 206821924 41 CATACCCCGCTACTGCTCTGTGACTACCCAGGCAGATGGGA CATACCCCGCTACTGCTCTGTAACTACCCAGGCAGATGGGA < 41bp 0.461367513151516 0.850974838881635 0.22442013 0.5694149 prediction 0.701949677763271 Functional Gain - DYRK3 ENSG00000143479 CDS Human protein_coding chr1:206821904 chr1:206821905 synonymous SNV . 0 22 hPsi_associated_SNPs_21847 0 0 1 0 0 Cytosol 0.438718593058774 0.438718592995102 0.1388298 0 hPsi_site_15571 iPseU_CNN:0.1388298;iRNA_PseU:0 15572 chr21 45738472 45738472 1 + G A LUAD 45738471 + 45738451 45738491 41 GCTGCCCCTCATGGAGTGCGTGCAGATGGTAAGCCCTGGGC GCTGCCCCTCATGGAGTGCGTACAGATGGTAAGCCCTGGGC < 41bp 0.522091217777439 0.873063143800627 0.50795853 0.7965478 prediction 0.701943852046375 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45738471 chr21:45738472 synonymous SNV . 0 22 hPsi_associated_SNPs_21848 0 0 1 0 1 Ribosome 0.438717778374036 0.438668741817779 0.57717854 0 hPsi_site_15572 iPseU_CNN:0.57717854;iRNA_PseU:0 15573 chr5 79616064 79616064 1 + G A GBM 79616063 + 79616043 79616083 41 CTCTGCTAAGTCAGCTGAGATGCCCACCATCTCCAAAACCG CTCTGCTAAGTCAGCTGAGATACCCACCATCTCCAAAACCG < 41bp 0.495711788352579 0.850967325457524 0.1894328 0.3766121 prediction 0.701934650915048 Functional Gain - SPZ1 ENSG00000164299 CDS Human protein_coding chr5:79616063 chr5:79616064 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_21849 0 0 0 0 0 unknown 0.438718154928073 0.438717616192743 0 0 hPsi_site_15573 iPseU_CNN:0;iRNA_PseU:0 15574 chrX 69282994 69282994 1 + G A UCEC 69282993 + 69282973 69283013 41 ACGACGACTTCATGATCTACTGCGACAACATCGTGCGCACC ACGACGACTTCATGATCTACTACGACAACATCGTGCGCACC < 41bp 0.469108050815647 0.850964160121393 0.31105256 0.62029856 prediction 0.701928320242786 Functional Gain - OTUD6A ENSG00000189401 CDS Human protein_coding chrX:69282993 chrX:69282994 nonsynonymous SNV 0.020 4 22 hPsi_associated_SNPs_21850 0 0 0 0 0 unknown 0.437656372087602 0.437631883125576 0.24059712 0 hPsi_site_15574 iPseU_CNN:0.24059712;iRNA_PseU:0 15575 chr7 44805036 44805036 1 + G A rs568400187 44805035 + 44805015 44805055 41 GGAGCCGGATGGGCCAGCACTGAAGCGCTGCCGCACCGTGA GGAGCCGGATGGGCCAGCACTAAAGCGCTGCCGCACCGTGA < 41bp 0.446263653421759 0.850956574271641 0.2961374 0.4272829 prediction 0.701913148543282 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44805035 chr7:44805036 synonymous SNV . 0 22 hPsi_associated_SNPs_21851 0 0 1 0 0 Cytosol 0.43869766598963 0.438717693153251 0 0 hPsi_site_15575 iPseU_CNN:0;iRNA_PseU:0 15576 chr16 29912367 29912367 1 + G A UCEC 29912366 + 29912346 29912386 41 AGAGACAGCCCAGAGTGGAATGTGGAAGGGAAACAGTCCAG AGAGACAGCCCAGAGTGGAATATGGAAGGGAAACAGTCCAG < 41bp 0.517939151703286 0.868890777158819 0.2575758 0.2914626 prediction 0.701903250911067 Functional Gain - ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912366 chr16:29912367 nonsynonymous SNV 0.863 1 22 hPsi_associated_SNPs_21852 0 0 1 0 0 nucleus 0.438718340268834 0.438718608618306 0 0 hPsi_site_15576 iPseU_CNN:0;iRNA_PseU:0 15577 chr12 56498590 56498590 1 + G A HNSC 56498589 + 56498569 56498609 41 GGTCGTGACCAAGTATAAGATGGGGGGCGACATCGCCAACA GGTCGTGACCAAGTATAAGATAGGGGGCGACATCGCCAACA < 41bp 0.470447663791377 0.850951213457478 0.27489555 0.52119577 prediction 0.701902426914956 Functional Gain - PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56498589 chr12:56498590 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21853 0 0 1 0 1 Ribosome 0.438718073890631 0.438722795750486 0.0423915399999999 0 hPsi_site_15577 iPseU_CNN:0.0423915399999999;iRNA_PseU:0 15578 chr1 231114924 231114924 1 + G A rs140251959 231114923 + 231114903 231114943 41 GGGGTGGCAGCGACTCCTACTGCTGCCTCGGCCTCCTGCCA GGGGTGGCAGCGACTCCTACTACTGCCTCGGCCTCCTGCCA < 41bp 0.471827735864484 0.850912766817921 0.32277355 0.71399575 prediction 0.701825533635842 Functional Gain - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231114923 chr1:231114924 nonsynonymous SNV 0.029 0 22 hPsi_associated_SNPs_21854 0 0 1 0 0 Endoplasmic reticulum 0.438710748218209 0.438718629483649 0.4279915 0 hPsi_site_15578 iPseU_CNN:0.4279915;iRNA_PseU:0 15579 chr5 176081954 176081954 1 + G A UCEC 176081953 + 176081933 176081973 41 ACCTCAATATCTACTTCAACTGCACTGACTTGAACCCCAGC ACCTCAATATCTACTTCAACTACACTGACTTGAACCCCAGC < 41bp 0.512580828662437 0.863484789582178 0.23981225 0.31619608 prediction 0.701807921839481 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176081953 chr5:176081954 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21855 0 0 1 0 2 Endoplasmic reticulum 0.444678658255339 0.427933583425161 0 0 hPsi_site_15579 iPseU_CNN:0;iRNA_PseU:0 15580 chr6 117853436 117853436 1 + G A UCEC 117853435 + 117853415 117853455 41 TGTTTCAGACCTCTTTATTGTGCAAAGCTGCCATCCATGCA TGTTTCAGACCTCTTTATTGTACAAAGCTGCCATCCATGCA < 41bp 0.542142701773432 0.893041621049944 0.28645366 0.66405356 prediction 0.701797838553023 Functional Gain - DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117853435 chr6:117853436 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21856 0 0 0 0 1 Endoplasmic reticulum 0.438705424499803 0.43870896986117 0.32810712 0 hPsi_site_15580 iPseU_CNN:0.32810712;iRNA_PseU:0 15581 chr5 179264557 179264557 1 + G A PRAD 179264556 + 179264536 179264576 41 GACCCAGATGTGACGGGGTGTGTGGCCCGAGGAAGCTGGAC GACCCAGATGTGACGGGGTGTATGGCCCGAGGAAGCTGGAC < 41bp 0.513230772782851 0.864125314667081 0.2670843 0.28553575 prediction 0.701789083768461 Functional Gain - MRNIP ENSG00000161010 CDS Human protein_coding chr5:179264556 chr5:179264557 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21857 0 0 1 0 0 unknown 0.439310395813124 0.438719545823715 0 0 hPsi_site_15581 iPseU_CNN:0;iRNA_PseU:0 15582 chr22 21332213 21332213 1 + G A CESC 21332212 + 21332192 21332232 41 GTCCCAGGCGTGTTTGCAGCTGGCGATGCTGTCACCTTCCC GTCCCAGGCGTGTTTGCAGCTAGCGATGCTGTCACCTTCCC < 41bp 0.440367699587614 0.850893279148972 0.2861212 0.38403898 prediction 0.701786558297943 Functional Gain - AIFM3 ENSG00000183773 CDS Human protein_coding chr22:21332212 chr22:21332213 nonsynonymous SNV 0.089 5 22 hPsi_associated_SNPs_21858 0 0 1 0 1 exosome 0.438721618747119 0.438726130358824 0 0 hPsi_site_15582 iPseU_CNN:0;iRNA_PseU:0 15583 chr1 92515905 92515905 1 + G A HNSC 92515904 + 92515884 92515924 41 ACGACACCCTGCTCAGCTGTTGAAATCCAGTTATTATTACT ACGACACCCTGCTCAGCTGTTAAAATCCAGTTATTATTACT < 41bp 0.521853185255608 0.872732059901095 0.50946593 0.7315657 prediction 0.701757749290975 Functional Gain - EPHX4 ENSG00000172031 CDS Human protein_coding chr1:92515904 chr1:92515905 synonymous SNV . 0 22 hPsi_associated_SNPs_21859 0 0 0 0 2 exosome 0.438686297555202 0.438721267982459 0.44419954 0 hPsi_site_15583 iPseU_CNN:0.44419954;iRNA_PseU:0 15584 chr2 176982209 176982209 1 + G A LUAD 176982208 + 176982188 176982228 41 GCCCACCAAAGTCTCCCAGGTGGAGAGCCCCGAGGCCAAAG GCCCACCAAAGTCTCCCAGGTAGAGAGCCCCGAGGCCAAAG < 41bp 0.525455869266431 0.876328305882419 0.34576857 0.6885119 prediction 0.701744873231975 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982208 chr2:176982209 synonymous SNV . 0 22 hPsi_associated_SNPs_21860 0 0 0 0 1 exosome 0.438718592996436 0.438718592995102 0.3770238 0 hPsi_site_15584 iPseU_CNN:0.3770238;iRNA_PseU:0 15585 chr19 19162728 19162728 1 + G A BLCA 19162727 + 19162707 19162747 41 ACCCAGAATGCTGATGAGGCTGACCTGACCTGCTCTGGGAT ACCCAGAATGCTGATGAGGCTAACCTGACCTGCTCTGGGAT < 41bp 0.515579596731857 0.866445023184273 0.26797536 0.33406037 prediction 0.701730852904831 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19162727 chr19:19162728 nonsynonymous SNV 0.049 0 22 hPsi_associated_SNPs_21861 0 0 1 0 0 Ribosome 0.438718589811215 0.438718594188069 0 0 hPsi_site_15585 iPseU_CNN:0;iRNA_PseU:0 15586 chr3 9775845 9775845 1 + G A GBM 9775844 + 9775824 9775864 41 CATGGGGGTGGACTTTGATGTGAAGACTTTCTGCCACAACT CATGGGGGTGGACTTTGATGTAAAGACTTTCTGCCACAACT < 41bp 0.468019900932574 0.850863933724919 0.32953006 0.6028237 prediction 0.701727867449839 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775844 chr3:9775845 synonymous SNV . 0 22 hPsi_associated_SNPs_21862 0 0 1 0 1 Nucleus 0.438726172051931 0.43872684919348 0.2056474 0 hPsi_site_15586 iPseU_CNN:0.2056474;iRNA_PseU:0 15587 chr22 40757331 40757331 1 + G A GBM 40757330 + 40757310 40757350 41 AAGGAGATGGAGGAACCCTTTGAAAAACAGCAGATTGGTGA AAGGAGATGGAGGAACCCTTTAAAAAACAGCAGATTGGTGA < 41bp 0.451398903709748 0.850857143496399 0.44482297 0.7567129 prediction 0.701714286992798 Functional Gain - ADSL ENSG00000239900 CDS Human protein_coding chr22:40757330 chr22:40757331 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21863 0 0 1 0 2 Ribosome 0.438718376609032 0.438718727420108 0.5134258 0 hPsi_site_15587 iPseU_CNN:0.5134258;iRNA_PseU:0 15588 chr21 18937753 18937753 1 + G A PCPG 18937752 + 18937732 18937772 41 ATTTTGCTTTGCAGGGAAGATGTGCCACCTCCAAAGAGCCG ATTTTGCTTTGCAGGGAAGATATGCCACCTCCAAAGAGCCG < 41bp 0.480942222376987 0.850856227656548 0.27886647 0.39269173 prediction 0.701712455313096 Functional Gain - CXADR ENSG00000154639 CDS Human protein_coding chr21:18937752 chr21:18937753 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_21864 0 0 1 0 1 Ribosome 0.438719568099705 0.438719077595256 0 0 hPsi_site_15588 iPseU_CNN:0;iRNA_PseU:0 15589 chr8 125463211 125463211 1 + G A rs150835991 125463210 + 125463190 125463230 41 AGCAACATGGAGAGAGAAAGTGGGAAGCCCGTGGCTGTTGT AGCAACATGGAGAGAGAAAGTAGGAAGCCCGTGGCTGTTGT < 41bp 0.493464920969648 0.850855738516189 0.22776583 0.2826268 prediction 0.701711477032378 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125463210 chr8:125463211 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_21865 0 0 1 0 0 Cytosol 0.438718590200305 0.438725737512206 0 0 hPsi_site_15589 iPseU_CNN:0;iRNA_PseU:0 15590 chr12 81112674 81112674 1 + G A SKCM 81112673 + 81112653 81112693 41 TAAAAACTCCTTATCCAGCTTGGATTGCTTATCCAACATAG TAAAAACTCCTTATCCAGCTTAGATTGCTTATCCAACATAG < 41bp 0.481218951746146 0.850851499700908 0.40254915 0.7717984 prediction 0.701702999401816 Functional Gain - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81112673 chr12:81112674 synonymous SNV . 0 22 hPsi_associated_SNPs_21866 0 0 0 0 1 unknown 0.438718592549649 0.438705527624369 0.5435968 0 hPsi_site_15590 iPseU_CNN:0.5435968;iRNA_PseU:0 15591 chr2 150294289 150294289 1 + G A BLCA 150294288 + 150294268 150294308 41 CTGGCGGATTGTCTGAAAGCTGCTCAGTCCCGAGACTTCAC CTGGCGGATTGTCTGAAAGCTACTCAGTCCCGAGACTTCAC < 41bp 0.464400370087444 0.850846647479331 0.22559655 0.57901955 prediction 0.701693294958663 Functional Gain - LYPD6 ENSG00000187123 CDS Human protein_coding chr2:150294288 chr2:150294289 nonsynonymous SNV 0.954 0 22 hPsi_associated_SNPs_21867 0 0 1 0 1 Cytosol 0.438720238432144 0.438736538651268 0.1580391 0 hPsi_site_15591 iPseU_CNN:0.1580391;iRNA_PseU:0 15592 chr1 248525105 248525105 1 + G A LUAD 248525104 + 248525084 248525124 41 CTGATGGCGTTGTCTGGAAATGCTGTCCTGATCCTTCTGAT CTGATGGCGTTGTCTGGAAATACTGTCCTGATCCTTCTGAT < 41bp 0.517422568154044 0.868267460348032 0.23710194 0.419898 prediction 0.701689784387976 Functional Gain - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525104 chr1:248525105 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_21868 0 0 0 0 0 unknown 0.434300433308835 0.439792052778426 0 0 hPsi_site_15592 iPseU_CNN:0;iRNA_PseU:0 15593 chr10 45919533 45919533 1 + C A COAD 45919532 + 45919512 45919552 41 GCTTCATGCACATGTTCCAGTCTTCTTGGAATGACTTCGCC GCTTCATGCACATGTTCCAGTATTCTTGGAATGACTTCGCC < 41bp 0.4951464383434 0.85084392501597 0.19298068 0.27524585 prediction 0.70168785003194 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45919532 chr10:45919533 nonsynonymous SNV 0.500 4 22 hPsi_associated_SNPs_21869 0 0 0 0 2 Cytosol 0.43870667018876 0.438856136082207 0 0 hPsi_site_15593 iPseU_CNN:0;iRNA_PseU:0 15594 chr17 71197664 71197664 1 + G A CESC 71197663 + 71197643 71197683 41 ATACGCAGATGCGGGGACCGTGCAGGAGATGCTGCGGACTC ATACGCAGATGCGGGGACCGTACAGGAGATGCTGCGGACTC < 41bp 0.447084054580553 0.850840412380374 0.4731608 0.8849561 prediction 0.701680824760749 Functional Gain - COG1 ENSG00000166685 CDS Human protein_coding chr17:71197663 chr17:71197664 synonymous SNV . 0 22 hPsi_associated_SNPs_21870 0 0 0 0 0 Nucleus 0.438735755801906 0.43677067048551 0.7699122 0 hPsi_site_15594 iPseU_CNN:0.7699122;iRNA_PseU:0 15595 chr14 20666407 20666407 1 + G A BLCA 20666406 + 20666386 20666426 41 GGGAGCCCACCATCTAAGAATGAAGCTGGAAAGCAGAAGAC GGGAGCCCACCATCTAAGAATAAAGCTGGAAAGCAGAAGAC < 41bp 0.491281912818046 0.850837932836072 0.30389282 0.5708639 prediction 0.701675865672143 Functional Gain - OR11G2 ENSG00000196832 CDS Human protein_coding chr14:20666406 chr14:20666407 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_21871 0 0 0 0 0 unknown 0.438718575722137 0.438719548918265 0.1417278 0 hPsi_site_15595 iPseU_CNN:0.1417278;iRNA_PseU:0 15596 chr5 140049145 140049145 1 + G A SKCM 140049144 + 140049124 140049164 41 GGGCTCTGAGCAGCAAGACTTGGAGCACCGATGACTTCTTC GGGCTCTGAGCAGCAAGACTTAGAGCACCGATGACTTCTTC < 41bp 0.486715315983923 0.85083325763722 0.32976088 0.5211807 prediction 0.70166651527444 Functional Gain - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049144 chr5:140049145 stopgain 0.998 0 22 hPsi_associated_SNPs_21872 0 0 1 0 1 Ribosome 0.438718293383076 0.43871772519765 0.0423614000000001 0 hPsi_site_15596 iPseU_CNN:0.0423614000000001;iRNA_PseU:0 15597 chr16 2821115 2821115 1 + G A rs75586278 2821114 + 2821094 2821134 41 GAGGGAATGCAGATGGGAGTTGGGGGAGGGGAGGATACAGT GAGGGAATGCAGATGGGAGTTAGGGGAGGGGAGGATACAGT < 41bp 0.499124487259125 0.850824123625304 0.17965928 0.27064735 prediction 0.701648247250607 Functional Gain - SRRM2 ENSG00000167978 UTR3 Human protein_coding chr16:2821114 chr16:2821115 . . 0 22 hPsi_associated_SNPs_21873 0 0 1 0 0 Nucleus 0.438759154000619 0.438718334176079 0 0 hPsi_site_15597 iPseU_CNN:0;iRNA_PseU:0 15598 chr7 819668 819668 1 + G A GBM 819667 + 819647 819687 41 CCTTGGTCACCTGGCTGCAGTGTGTCAAGGGTGCCAACGCA CCTTGGTCACCTGGCTGCAGTATGTCAAGGGTGCCAACGCA < 41bp 0.538868685469431 0.889690953842024 0.344827 0.49792787 prediction 0.701644536745186 Functional Gain - DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819667 chr7:819668 nonsynonymous SNV 0.101 3 22 hPsi_associated_SNPs_21874 0 0 1 0 1 Ribosome 0.438718423806785 0.438718592973808 0 0 hPsi_site_15598 iPseU_CNN:0;iRNA_PseU:0 15599 chr11 113235659 113235659 1 + C A READ 113235658 + 113235638 113235678 41 TGGAGGTGCCCAACGTTGCGTCTTCCCTGCTAAAGACGGAC TGGAGGTGCCCAACGTTGCGTATTCCCTGCTAAAGACGGAC < 41bp 0.501194776189666 0.852009799549141 0.28270528 0.48262835 prediction 0.70163004671895 Functional Gain - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113235658 chr11:113235659 nonsynonymous SNV 0.109 1 22 hPsi_associated_SNPs_21875 0 0 0 0 0 cytosol 0.438558958258755 0.43871859308673 0 0 hPsi_site_15599 iPseU_CNN:0;iRNA_PseU:0 15600 chr4 140625237 140625237 1 + G A STAD 140625236 + 140625216 140625256 41 CTCCTAGGTGCCCTGGGAATTGCAAACAGCTTTCTGGATGA CTCCTAGGTGCCCTGGGAATTACAAACAGCTTTCTGGATGA < 41bp 0.534504577095256 0.885316950145395 0.30232364 0.37377784 prediction 0.701624746100278 Functional Gain - MGST2 ENSG00000085871 CDS Human protein_coding chr4:140625236 chr4:140625237 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_21876 0 0 1 4 1 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0 0 hPsi_site_15600 iPseU_CNN:0;iRNA_PseU:0 15601 chr6 84233979 84233979 1 + G A LIHC 84233978 + 84233958 84233998 41 AGGCATGGGGGACGCTACCTTGGACTATGACTATGCTCTTC AGGCATGGGGGACGCTACCTTAGACTATGACTATGCTCTTC < 41bp 0.445650560617405 0.850806515076991 0.3297146 0.7469833 prediction 0.701613030153983 Functional Gain - PRSS35 ENSG00000146250 CDS Human protein_coding chr6:84233978 chr6:84233979 synonymous SNV . 0 22 hPsi_associated_SNPs_21877 0 0 0 0 0 exosome 0.43869810777158 0.438718591696034 0.4939666 0 hPsi_site_15601 iPseU_CNN:0.4939666;iRNA_PseU:0 15602 chr7 44097410 44097410 1 + G A UCEC 44097409 + 44097389 44097429 41 GTACCAGAAGACCAATGCCGTGTCTGAGATTAAAAGGGTTG GTACCAGAAGACCAATGCCGTATCTGAGATTAAAAGGGTTG < 41bp 0.534348825787666 0.885151787195729 0.23969257 0.6160079 prediction 0.701605922816125 Functional Gain - DBNL ENSG00000136279 CDS Human protein_coding chr7:44097409 chr7:44097410 synonymous SNV . 0 22 hPsi_associated_SNPs_21878 0 0 1 0 2 Ribosome 0.475896760103649 0.448488503548076 0.2320158 0 hPsi_site_15602 iPseU_CNN:0.2320158;iRNA_PseU:0 15603 chr11 64795031 64795031 1 + G A BLCA 64795030 + 64795010 64795050 41 ATGTCCCGCCAGGCGAAGGATGACTTCCTGCGGCACTACAC ATGTCCCGCCAGGCGAAGGATAACTTCCTGCGGCACTACAC < 41bp 0.46414142926033 0.850794807807837 0.19384858 0.43622118 prediction 0.701589615615673 Functional Gain - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64795030 chr11:64795031 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_21879 0 0 1 0 1 Ribosome 0.440432904698221 0.438154668702116 0 0 hPsi_site_15603 iPseU_CNN:0;iRNA_PseU:0 15604 chr18 8831645 8831645 1 + G A COAD 8831644 + 8831624 8831664 41 TAGCTCCATCCCTAGAGCCCTGCTTCTCCAGGCCCGAGAGA TAGCTCCATCCCTAGAGCCCTACTTCTCCAGGCCCGAGAGA < 41bp 0.530510273646742 0.88130388073888 0.3331322 0.7740716 prediction 0.701587214184276 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8831644 chr18:8831645 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21880 0 0 1 1 1 Nucleus 0.438693347712425 0.438720468113301 0.5481432 0 hPsi_site_15604 iPseU_CNN:0.5481432;iRNA_PseU:0 15605 chr20 1145000 1145000 1 + C A rs114332593 1144999 + 1144979 1145019 41 TGATTGTGGATCCCCTGAGATCTGGCTTCCCAAGAGCACTT TGATTGTGGATCCCCTGAGATATGGCTTCCCAAGAGCACTT < 41bp 0.498823770675662 0.85078729184776 0.24283716 0.25582892 prediction 0.701574583695521 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1144999 chr20:1145000 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_21881 0 0 1 0 1 Ribosome 0.43871672017022 0.440489622531479 0 0 hPsi_site_15605 iPseU_CNN:0;iRNA_PseU:0 15606 chr7 79082403 79082403 1 + G A COAD 79082402 + 79082382 79082422 41 CACGGCCAGCACGTCCCTGATGGTGAGCCCCGCCACGGGGG CACGGCCAGCACGTCCCTGATAGTGAGCCCCGCCACGGGGG < 41bp 0.489549325504613 0.850776732966172 0.2799474 0.41513205 prediction 0.701553465932344 Functional Gain - MAGI2 ENSG00000187391 CDS Human protein_coding chr7:79082402 chr7:79082403 synonymous SNV . 0 22 hPsi_associated_SNPs_21882 0 0 1 0 0 cytosol 0.438717873506948 0.438717761255314 0 0 hPsi_site_15606 iPseU_CNN:0;iRNA_PseU:0 15607 chr10 75034301 75034301 1 + G A SKCM 75034300 + 75034280 75034320 41 AGCATGCCTTGGCCTCAGAATGATTTCCACTCAGAAAATAG AGCATGCCTTGGCCTCAGAATAATTTCCACTCAGAAAATAG < 41bp 0.509492896425366 0.860261242798363 0.23242709 0.38811827 prediction 0.701536692745995 Functional Gain - CFAP70 ENSG00000156042 CDS Human protein_coding chr10:75034300 chr10:75034301 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21883 0 0 0 0 1 cytosol 0.435365777710383 0.438757398477136 0 0 hPsi_site_15607 iPseU_CNN:0;iRNA_PseU:0 15608 chr4 26719590 26719590 1 + G A HNSC 26719589 + 26719569 26719609 41 TTCCCGGGATACATCTGTGTTGAGTCACTTTGCATTCAACA TTCCCGGGATACATCTGTGTTAAGTCACTTTGCATTCAACA < 41bp 0.460033522725001 0.850762440046377 0.61840886 0.793663 prediction 0.701524880092754 Functional Gain - TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26719589 chr4:26719590 synonymous SNV . 0 22 hPsi_associated_SNPs_21884 0 0 0 0 2 Endoplasmic reticulum 0.442504067240502 0.438721286352614 0.35050828 0 hPsi_site_15608 iPseU_CNN:0.35050828;iRNA_PseU:0 15609 chr7 132412262 132412262 1 + G A UCEC 132412261 + 132412241 132412281 41 TGTCCATCAAAGCCCCACGGTGCTTTATCTTCATTCTGAGC TGTCCATCAAAGCCCCACGGTACTTTATCTTCATTCTGAGC < 41bp 0.463490996450103 0.850759794814125 0.27116358 0.7666606 prediction 0.70151958962825 Functional Gain - FLJ40288 ENSG00000183470 CDS Human lincRNA chr7:132412261 chr7:132412262 synonymous SNV . 0 22 hPsi_associated_SNPs_21885 0 0 0 0 1 unknown 0.438774386033841 0.438683762381822 0.5333212 0 hPsi_site_15609 iPseU_CNN:0.5333212;iRNA_PseU:0 15610 chr5 95194593 95194593 1 + G A rs17085193 95194592 + 95194572 95194612 41 CAGGCTGCTGCTCCATCGCATGAATTCCAGCAGGTGGCGCT CAGGCTGCTGCTCCATCGCATAAATTCCAGCAGGTGGCGCT < 41bp 0.473736613262304 0.850756842122358 0.41745538 0.79518175 prediction 0.701513684244715 Functional Gain - LINC01554 ENSG00000236882 CDS Human lincRNA chr5:95194592 chr5:95194593 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_21886 0 0 0 0 1 unknown 0.438800562168821 0.438718691549439 0.5903635 0 hPsi_site_15610 iPseU_CNN:0.5903635;iRNA_PseU:0 15611 chr4 38945163 38945163 1 + G A LUAD 38945162 + 38945142 38945182 41 ACATATCCAGACCAGTTGTTTGAAAGCACAGCCGTGACCTG ACATATCCAGACCAGTTGTTTAAAAGCACAGCCGTGACCTG < 41bp 0.526900467659101 0.877655437373249 0.32252136 0.5569515 prediction 0.701509939428297 Functional Gain - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38945162 chr4:38945163 synonymous SNV . 0 22 hPsi_associated_SNPs_21887 0 0 0 0 1 Cytosol 0.438706441364115 0.438718611007485 0.113903 0 hPsi_site_15611 iPseU_CNN:0.113903;iRNA_PseU:0 15612 chr3 99509748 99509748 1 + G A CESC 99509747 + 99509727 99509767 41 CCTTGCCATGGGCAAGGAGATGCCCCACTTGCAGTATGGCA CCTTGCCATGGGCAAGGAGATACCCCACTTGCAGTATGGCA < 41bp 0.535407917348889 0.886148774388922 0.26383662 0.6664721 prediction 0.701481714080065 Functional Gain - COL8A1 ENSG00000144810 CDS Human protein_coding chr3:99509747 chr3:99509748 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_21888 0 0 1 0 0 Cytosol 0.438717824799425 0.438715402462968 0.3329442 0 hPsi_site_15612 iPseU_CNN:0.3329442;iRNA_PseU:0 15613 chr20 31805393 31805393 1 + G A LUSC 31805392 + 31805372 31805412 41 CTTCCTCGGGTTGCTGGCCTTGCCCTTGGCACCACACAAGC CTTCCTCGGGTTGCTGGCCTTACCCTTGGCACCACACAAGC < 41bp 0.530005139011305 0.880744630021606 0.18856096 0.44268605 prediction 0.701478982020603 Functional Gain - BPIFA3 ENSG00000131059 CDS Human protein_coding chr20:31805392 chr20:31805393 synonymous SNV . 0 22 hPsi_associated_SNPs_21889 0 0 0 0 1 unknown 0.438718603462367 0.438718591678885 0 0 hPsi_site_15613 iPseU_CNN:0;iRNA_PseU:0 15614 chr14 96707064 96707064 1 + G A SKCM 96707063 + 96707043 96707083 41 GGAGACGCTCTGCCGCGTGGTGAATGCCATTATCTCCATGA GGAGACGCTCTGCCGCGTGGTAAATGCCATTATCTCCATGA < 41bp 0.521152459395936 0.871887757884649 0.34083247 0.751252 prediction 0.701470596977426 Functional Gain - BDKRB2 ENSG00000168398 CDS Human protein_coding chr14:96707063 chr14:96707064 synonymous SNV . 0 22 hPsi_associated_SNPs_21890 0 0 0 0 0 exosome 0.438718173068476 0.438720590062477 0.502504 0 hPsi_site_15614 iPseU_CNN:0.502504;iRNA_PseU:0 15615 chr10 112771399 112771399 1 + G A CESC 112771398 + 112771378 112771418 41 GAACCTAGAAGAACTGTATTTGAATGACAACCCCAACCTGC GAACCTAGAAGAACTGTATTTAAATGACAACCCCAACCTGC < 41bp 0.522956623069936 0.873689523920234 0.26963478 0.841964 prediction 0.701465801700595 Functional Gain - SHOC2 ENSG00000108061 CDS Human protein_coding chr10:112771398 chr10:112771399 synonymous SNV . 0 22 hPsi_associated_SNPs_21891 0 0 1 0 1 Nucleus 0.438718742088432 0.438364269018237 0.683928 0 hPsi_site_15615 iPseU_CNN:0.683928;iRNA_PseU:0 15616 chr19 39989632 39989632 1 + G A CESC 39989631 + 39989611 39989651 41 GGCCATGGTCTCCCCACGGATGTCCGGGCTCCTCTCCCAGA GGCCATGGTCTCCCCACGGATATCCGGGCTCCTCTCCCAGA < 41bp 0.526654508284084 0.877379784249791 0.25655934 0.33137 prediction 0.701450551931414 Functional Gain - DLL3 ENSG00000090932 CDS Human protein_coding chr19:39989631 chr19:39989632 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_21892 0 0 0 0 1 exosome 0.438718450075754 0.438711590191069 0 0 hPsi_site_15616 iPseU_CNN:0;iRNA_PseU:0 15617 chr16 67859100 67859100 1 + G A LUAD 67859099 + 67859079 67859119 41 CACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCATCGC CACTACCTCAGTGAGCGAGATACCTGTAAGATCCTCATCGC < 41bp 0.458496608361192 0.85071839333848 0.21662852 0.557907 prediction 0.701436786676961 Functional Gain - TSNAXIP1 ENSG00000102904 CDS Human protein_coding chr16:67859099 chr16:67859100 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_21893 0 0 0 0 2 exosome 0.438874454494299 0.438084795450597 0.115814 0 hPsi_site_15617 iPseU_CNN:0.115814;iRNA_PseU:0 15618 chr10 98064320 98064320 1 + G A LUSC 98064319 + 98064299 98064339 41 ACCCCGGCAGACGGGTGCCTTGATGGCCTCCTCTCCTCAAG ACCCCGGCAGACGGGTGCCTTAATGGCCTCCTCTCCTCAAG < 41bp 0.534988146668021 0.88570341463993 0.34731346 0.5358877 prediction 0.701430535943818 Functional Gain - DNTT ENSG00000107447 CDS Human protein_coding chr10:98064319 chr10:98064320 synonymous SNV . 0 22 hPsi_associated_SNPs_21894 0 0 0 0 0 exosome 0.438716913966653 0.440870599096596 0.0717753999999999 0 hPsi_site_15618 iPseU_CNN:0.0717753999999999;iRNA_PseU:0 15619 chr5 72875802 72875802 1 + G A UCEC 72875801 + 72875781 72875821 41 GATTGATTACCAAAGAGAATTGTTAGAAACCTTGGGGATGA GATTGATTACCAAAGAGAATTATTAGAAACCTTGGGGATGA < 41bp 0.505301174108144 0.856012432802506 0.33903003 0.37131763 prediction 0.701422517388724 Functional Gain - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72875801 chr5:72875802 synonymous SNV . 0 22 hPsi_associated_SNPs_21895 0 0 1 0 0 Ribosome 0.438718595750611 0.438718594943499 0 0 hPsi_site_15619 iPseU_CNN:0;iRNA_PseU:0 15620 chr16 216677 216677 1 + G A rs150128912 216676 + 216656 216696 41 GGACAAGTTCCTGACTGGTGTGGCCGTGGTGCTGACCGAAA GGACAAGTTCCTGACTGGTGTAGCCGTGGTGCTGACCGAAA < 41bp 0.520697318661813 0.871404507736552 0.18246657 0.35168314 prediction 0.701414378149478 Functional Gain - HBM ENSG00000206177 CDS Human protein_coding chr16:216676 chr16:216677 synonymous SNV . 0 22 hPsi_associated_SNPs_21896 0 0 0 0 1 exosome 0.43872123327662 0.438718592487623 0 0 hPsi_site_15620 iPseU_CNN:0;iRNA_PseU:0 15621 chr2 219677693 219677693 1 + G A UCEC 219677692 + 219677672 219677712 41 CGAAGATATGGAGGCCCAACTGCAGGCAGCAGGGCCAGATG CGAAGATATGGAGGCCCAACTACAGGCAGCAGGGCCAGATG < 41bp 0.540333611134649 0.891037515535264 0.20662242 0.26605135 prediction 0.70140780880123 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677692 chr2:219677693 synonymous SNV . 0 22 hPsi_associated_SNPs_21897 0 0 1 0 1 cytosol 0.438578957343604 0.438823433293432 0 0 hPsi_site_15621 iPseU_CNN:0;iRNA_PseU:0 15622 chr11 5510551 5510551 1 + G A SKCM 5510550 + 5510530 5510570 41 TATTGTCTATGGGCTAACTGTGGCTCTGCTGGCCATGGGAC TATTGTCTATGGGCTAACTGTAGCTCTGCTGGCCATGGGAC < 41bp 0.479911530407552 0.850697343531724 0.22049633 0.5394433 prediction 0.701394687063449 Functional Gain - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510550 chr11:5510551 synonymous SNV . 0 22 hPsi_associated_SNPs_21898 0 0 0 0 0 chromatin 0.438718203584469 0.438730829151938 0.0788865999999999 0 hPsi_site_15622 iPseU_CNN:0.0788865999999999;iRNA_PseU:0 15623 chr9 113530182 113530182 1 + G A OV 113530181 + 113530161 113530201 41 GTCCTGGCAAAAGATGCTCTTGTTTTTCTCAACACCTCCTA GTCCTGGCAAAAGATGCTCTTATTTTTCTCAACACCTCCTA < 41bp 0.444862571273324 0.850697252426257 0.3540817 0.5330954 prediction 0.701394504852514 Functional Gain - MUSK ENSG00000030304 CDS Human protein_coding chr9:113530181 chr9:113530182 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21899 0 0 0 0 1 exosome 0.438517211740824 0.438696006645927 0.0661908 0 hPsi_site_15623 iPseU_CNN:0.0661908;iRNA_PseU:0 15624 chr1 26514727 26514727 1 + G A OV 26514726 + 26514706 26514746 41 ACCTGCTTGCTCTCCATAGGTGGGTGCGTCATCTCATTACC ACCTGCTTGCTCTCCATAGGTAGGTGCGTCATCTCATTACC < 41bp 0.454371501432386 0.850687100508657 0.40776116 0.6923969 prediction 0.701374201017315 Functional Gain - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26514726 chr1:26514727 stopgain 0.994 1 22 hPsi_associated_SNPs_21900 0 0 0 0 2 Cytosol 0.438718594832666 0.438717199259446 0.3847938 0 hPsi_site_15624 iPseU_CNN:0.3847938;iRNA_PseU:0 15625 chr5 140572975 140572975 1 + G A LGG 140572974 + 140572954 140572994 41 GTATCCTATTCATTTTTTGATGCCTCAGAAAATATTCGAAC GTATCCTATTCATTTTTTGATACCTCAGAAAATATTCGAAC < 41bp 0.483560384512396 0.850684015839002 0.2740311 0.34977487 prediction 0.701368031678004 Functional Gain - PCDHB10 ENSG00000120324 CDS Human protein_coding chr5:140572974 chr5:140572975 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_21901 0 0 0 0 0 exosome 0.443300679050024 0.438869015883205 0 0 hPsi_site_15625 iPseU_CNN:0;iRNA_PseU:0 15626 chr1 152857050 152857050 1 + G A UCEC 152857049 + 152857029 152857069 41 AGCCAAAAGGCAGTCAATGCTGCCCACCAAAACACAATCAC AGCCAAAAGGCAGTCAATGCTACCCACCAAAACACAATCAC < 41bp 0.524627242186981 0.8753109768815 0.24723929 0.5165446 prediction 0.701367469389038 Functional Gain - SMCP ENSG00000163206 CDS Human protein_coding chr1:152857049 chr1:152857050 nonsynonymous SNV 0.008 2 22 hPsi_associated_SNPs_21902 0 0 0 0 0 unknown 0.438695007239496 0.438709984963431 0.0330892 0 hPsi_site_15626 iPseU_CNN:0.0330892;iRNA_PseU:0 15627 chr11 3423910 3423910 1 + G A rs188426660 3423909 + 3423889 3423929 41 TGCTGGGAGCGGGCTGGTGATGCGCCTCCGCGAGCGGCCAG TGCTGGGAGCGGGCTGGTGATACGCCTCCGCGAGCGGCCAG < 41bp 0.471710767869034 0.850681929947632 0.27699912 0.80419946 prediction 0.701363859895265 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3423909 chr11:3423910 . . 0 22 hPsi_associated_SNPs_21903 0 0 0 0 2 unknown 0.438678737128109 0.438664329682953 0.60839892 0 hPsi_site_15627 iPseU_CNN:0.60839892;iRNA_PseU:0 15628 chr11 121032918 121032918 1 + G A STAD 121032917 + 121032897 121032937 41 TGAAGGGCTTCTTCCAGCCCTGCTATGGGCTTCTCGATCCC TGAAGGGCTTCTTCCAGCCCTACTATGGGCTTCTCGATCCC < 41bp 0.537560870259757 0.888241886446715 0.26944005 0.30871165 prediction 0.701362032373915 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:121032917 chr11:121032918 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_21904 0 0 0 0 0 exosome 0.438718593115227 0.438718592476321 0 0 hPsi_site_15628 iPseU_CNN:0;iRNA_PseU:0 15629 chr12 119568581 119568581 1 + C A LIHC 119568580 + 119568560 119568600 41 AGGACAGCCCTGAGGCCCAGTCCAGTCGCCCGCCCAGTCAA AGGACAGCCCTGAGGCCCAGTACAGTCGCCCGCCCAGTCAA < 41bp 0.501011555547465 0.8516871339831 0.19164798 0.37814784 prediction 0.70135115687127 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119568580 chr12:119568581 nonsynonymous SNV 0.549 1 22 hPsi_associated_SNPs_21905 0 0 1 0 2 Endoplasmic reticulum 0.438243873340829 0.438741903629923 0 0 hPsi_site_15629 iPseU_CNN:0;iRNA_PseU:0 15630 chr7 90042324 90042324 1 + G A LUSC 90042323 + 90042303 90042343 41 CTGATTGGAATGTGCAACACTGCCTTCAGGTCCTCGGTGCC CTGATTGGAATGTGCAACACTACCTTCAGGTCCTCGGTGCC < 41bp 0.462210640468564 0.850673846610672 0.35675836 0.56640166 prediction 0.701347693221345 Functional Gain - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042323 chr7:90042324 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_21906 0 0 1 0 0 Ribosome 0.438713991885896 0.438718289020329 0.13280332 0 hPsi_site_15630 iPseU_CNN:0.13280332;iRNA_PseU:0 15631 chr16 55516877 55516877 1 + G A LUAD 55516876 + 55516856 55516896 41 GAGCTGCAACCTGTTTGTGCTGAAGGACACACTAAAGAAGA GAGCTGCAACCTGTTTGTGCTAAAGGACACACTAAAGAAGA < 41bp 0.454028859329627 0.850673586156541 0.28858334 0.6316314 prediction 0.701347172313081 Functional Gain - MMP2 ENSG00000087245 CDS Human protein_coding chr16:55516876 chr16:55516877 synonymous SNV . 0 22 hPsi_associated_SNPs_21907 0 0 0 0 1 Endoplasmic reticulum 0.438945821933131 0.438816691018165 0.2632628 0 hPsi_site_15631 iPseU_CNN:0.2632628;iRNA_PseU:0 15632 chr3 45077285 45077285 1 + G A BLCA 45077284 + 45077264 45077304 41 GCCTACAAGAACTGGGAGACTGAGATCACCGCGCAACCCGA GCCTACAAGAACTGGGAGACTAAGATCACCGCGCAACCCGA < 41bp 0.519116415900746 0.86978908648588 0.33678025 0.57415473 prediction 0.701345341170269 Functional Gain - CLEC3B ENSG00000163815 CDS Human protein_coding chr3:45077284 chr3:45077285 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_21908 0 0 0 0 0 Cytosol 0.438707661257203 0.43849745204548 0.14830946 0 hPsi_site_15632 iPseU_CNN:0.14830946;iRNA_PseU:0 15633 chr19 5915332 5915332 1 + G A BLCA 5915331 + 5915311 5915351 41 TGACCAGTGCCTGGCAGCTGTGAGCAGCTCCGGCTCAGCCC TGACCAGTGCCTGGCAGCTGTAAGCAGCTCCGGCTCAGCCC < 41bp 0.481071159366723 0.850656829491562 0.18980932 0.27530125 prediction 0.701313658983123 Functional Gain - CAPS ENSG00000105519 CDS Human protein_coding chr19:5915331 chr19:5915332 synonymous SNV . 0 22 hPsi_associated_SNPs_21909 0 0 0 0 0 chromatin 0.438718090777583 0.438726043041905 0 0 hPsi_site_15633 iPseU_CNN:0;iRNA_PseU:0 15634 chr15 41870441 41870441 1 + G A UCEC 41870440 + 41870420 41870460 41 GACACAGAGGCTTTTGCTGCTGCAGCAAGGGCTACTGCCAC GACACAGAGGCTTTTGCTGCTACAGCAAGGGCTACTGCCAC < 41bp 0.533836969840916 0.884486538658369 0.24800697 0.31748325 prediction 0.701299137634905 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41870440 chr15:41870441 synonymous SNV . 0 22 hPsi_associated_SNPs_21910 0 0 0 0 0 Ribosome 0.438720140780367 0.438832333235894 0 0 hPsi_site_15634 iPseU_CNN:0;iRNA_PseU:0 15635 chr8 125555358 125555358 1 + G A BLCA 125555357 + 125555337 125555377 41 CCGATACTTTGCTTGTTTGATGAGAGCCCGGTTTGAAGAAC CCGATACTTTGCTTGTTTGATAAGAGCCCGGTTTGAAGAAC < 41bp 0.470034340682692 0.850646436419611 0.30122703 0.5974817 prediction 0.701292872839222 Functional Gain - NDUFB9 ENSG00000147684 CDS Human protein_coding chr8:125555357 chr8:125555358 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_21911 0 0 1 0 1 Ribosome 0.438723158932297 0.438724743278995 0.1949634 0 hPsi_site_15635 iPseU_CNN:0.1949634;iRNA_PseU:0 15636 chr3 58303399 58303399 1 + G A rs538545058 58303398 + 58303378 58303418 41 GTGGGCTTCGGAGGACAGTCTGTCTGAACCTGCCAGTGCTG GTGGGCTTCGGAGGACAGTCTATCTGAACCTGCCAGTGCTG < 41bp 0.516160031289778 0.866804870739164 0.48976538 0.6738274 prediction 0.701289678898773 Functional Gain - HTD2 ENSG00000255154 CDS Human protein_coding chr3:58303398 chr3:58303399 nonsynonymous SNV 0.029 0 22 hPsi_associated_SNPs_21912 0 0 1 0 0 unknown 0.43869847211996 0.438715699818509 0.3476548 0 hPsi_site_15636 iPseU_CNN:0.3476548;iRNA_PseU:0 15637 chr11 6898467 6898467 1 + G A SKCM 6898466 + 6898446 6898486 41 TGTGCTGACACCTCTGTGTTTGAACTGGAGGCTCTGACAGC TGTGCTGACACCTCTGTGTTTAAACTGGAGGCTCTGACAGC < 41bp 0.47681681335089 0.850637417989245 0.29164803 0.3975924 prediction 0.70127483597849 Functional Gain - OR10A4 ENSG00000170782 CDS Human protein_coding chr11:6898466 chr11:6898467 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21913 0 0 0 0 0 exosome 0.440686424695321 0.438719123604864 0 0 hPsi_site_15637 iPseU_CNN:0;iRNA_PseU:0 15638 chr11 114182986 114182986 1 + G A SKCM 114182985 + 114182965 114183005 41 GAAGCCAGGGGGCTTCCTGGTGATCATGGATGCGCTCAAGA GAAGCCAGGGGGCTTCCTGGTAATCATGGATGCGCTCAAGA < 41bp 0.541421443095402 0.892054887092321 0.29949108 0.8471131 prediction 0.701266887993838 Functional Gain - NNMT ENSG00000166741 CDS Human protein_coding chr11:114182985 chr11:114182986 synonymous SNV . 0 22 hPsi_associated_SNPs_21914 0 0 0 0 0 Cytosol 0.438717346365906 0.438718593001274 0.6942262 0 hPsi_site_15638 iPseU_CNN:0.6942262;iRNA_PseU:0 15639 chr21 46066504 46066504 1 + G A SKCM 46066503 + 46066483 46066523 41 CTGCGCCCCGGCCCCCTCCCTGAGCCTGGTCTGCACCCCAG CTGCGCCCCGGCCCCCTCCCTAAGCCTGGTCTGCACCCCAG < 41bp 0.495566859441138 0.850625709393617 0.1774486 0.421467 prediction 0.701251418787235 Functional Gain - KRTAP10-11 ENSG00000243489 CDS Human protein_coding chr21:46066503 chr21:46066504 synonymous SNV . 0 22 hPsi_associated_SNPs_21915 0 0 0 0 0 unknown 0.438718593436947 0.438718592871629 0 0 hPsi_site_15639 iPseU_CNN:0;iRNA_PseU:0 15640 chr5 139189221 139189221 1 + G A UCEC 139189220 + 139189200 139189240 41 GAACCCACGAAGGACCCAGATGTGGCCTTCCATGGCCTCAG GAACCCACGAAGGACCCAGATATGGCCTTCCATGGCCTCAG < 41bp 0.539216817167814 0.889840526858203 0.2779339 0.25939202 prediction 0.701247419380778 Functional Gain - PSD2 ENSG00000146005 CDS Human protein_coding chr5:139189220 chr5:139189221 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_21916 0 0 0 0 0 exosome 0.438714085619281 0.438751017369101 0 0 hPsi_site_15640 iPseU_CNN:0;iRNA_PseU:0 15641 chr1 159778872 159778872 1 + C A COAD 159778871 + 159778851 159778891 41 GTCAGCCTTGAGGCTCCTTTTCTCCTTCCACAAGGACGGCC GTCAGCCTTGAGGCTCCTTTTATCCTTCCACAAGGACGGCC < 41bp 0.496690475781377 0.850614229983211 0.46467558 0.59039056 prediction 0.701228459966421 Functional Gain - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159778871 chr1:159778872 nonsynonymous SNV 0.016 2 22 hPsi_associated_SNPs_21917 0 0 0 0 0 exosome 0.43871859299538 0.438718592254039 0.18078112 0 hPsi_site_15641 iPseU_CNN:0.18078112;iRNA_PseU:0 15642 chr16 30941418 30941418 1 + G A LAML 30941417 + 30941397 30941437 41 CCAAAGCCGCCTTTGGCCTCTGCAGAGGGCCCAGCGGTGCC CCAAAGCCGCCTTTGGCCTCTACAGAGGGCCCAGCGGTGCC < 41bp 0.445361240195458 0.850612167046156 0.522742 0.6289878 prediction 0.701224334092312 Functional Gain - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941417 chr16:30941418 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_21918 0 0 1 0 1 chromatin 0.438718592995026 0.4387185929951 0.2124916 0 hPsi_site_15642 iPseU_CNN:0.2124916;iRNA_PseU:0 15643 chr9 115336551 115336551 1 + G A COAD 115336550 + 115336530 115336570 41 ACTGGCCACTAACAGCTACTTGCAGAGCTGGGTCCCAAGAG ACTGGCCACTAACAGCTACTTACAGAGCTGGGTCCCAAGAG < 41bp 0.509008693430865 0.859588161755175 0.20710629 0.5363475 prediction 0.70115893664862 Functional Gain - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115336550 chr9:115336551 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21919 0 0 1 0 0 Nucleus 0.437561278233031 0.437794481528003 0.072695 0 hPsi_site_15643 iPseU_CNN:0.072695;iRNA_PseU:0 15644 chr7 142988726 142988726 1 + G A rs4647288 142988725 + 142988705 142988745 41 ACAGCTGTTGTTGAGCGAATTGTTAGAACATCTTCTGGAGA ACAGCTGTTGTTGAGCGAATTATTAGAACATCTTCTGGAGA < 41bp 0.458708554713716 0.850578815701668 0.3454826 0.5984783 prediction 0.701157631403335 Functional Gain - CASP2 ENSG00000106144 CDS Human protein_coding chr7:142988725 chr7:142988726 synonymous SNV . 0 22 hPsi_associated_SNPs_21920 0 0 1 0 2 Nucleus 0.43825840251426 0.438712963547798 0.1969566 0 hPsi_site_15644 iPseU_CNN:0.1969566;iRNA_PseU:0 15645 chr16 2285469 2285469 1 + G A COAD 2285468 + 2285448 2285488 41 AGTGGCACTGAACAGGCCACTGTGACCATGGTGTCATCAGA AGTGGCACTGAACAGGCCACTATGACCATGGTGTCATCAGA < 41bp 0.526868027248886 0.87743485445973 0.22177339 0.23501933 prediction 0.701133654421688 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2285468 chr16:2285469 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_21921 0 0 0 4 0 chromatin 0.438717974632254 0.438706103705929 0 0 hPsi_site_15645 iPseU_CNN:0;iRNA_PseU:0 15646 chr9 90343652 90343652 1 + G A UCEC 90343651 + 90343631 90343671 41 AGGCTGCAATGGTGGCCTAATGGATTATGCTTTCCAGTATG AGGCTGCAATGGTGGCCTAATAGATTATGCTTTCCAGTATG < 41bp 0.454544616903934 0.85056328753715 0.27189913 0.3048858 prediction 0.701126575074301 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90343651 chr9:90343652 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_21922 0 0 1 0 2 Ribosome 0.438718590225869 0.438712015393335 0 0 hPsi_site_15646 iPseU_CNN:0;iRNA_PseU:0 15647 chr8 144642854 144642854 1 + G A rs11551202 144642853 + 144642833 144642873 41 GTACGTGGTGACTGAGGTGCTGCAGACACAGAAGGAGGTGG GTACGTGGTGACTGAGGTGCTACAGACACAGAAGGAGGTGG < 41bp 0.451467983197716 0.850556648618185 0.3466484 0.6480243 prediction 0.701113297236371 Functional Gain - GSDMD ENSG00000104518 CDS Human protein_coding chr8:144642853 chr8:144642854 synonymous SNV . 0 22 hPsi_associated_SNPs_21923 0 0 1 0 2 Ribosome 0.436590238442091 0.437995581120629 0.2960486 0 hPsi_site_15647 iPseU_CNN:0.2960486;iRNA_PseU:0 15648 chr19 58131926 58131926 1 + G A COAD 58131925 + 58131905 58131945 41 AACTTCCAGGCTACTTTGGGTGGCTGCCAACAAAAGGCCAT AACTTCCAGGCTACTTTGGGTAGCTGCCAACAAAAGGCCAT < 41bp 0.468310130261005 0.850552468409803 0.24569628 0.4444374 prediction 0.701104936819606 Functional Gain - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58131925 chr19:58131926 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21924 0 0 0 0 0 Cytosol 0.438718593094201 0.438679400182846 0 0 hPsi_site_15648 iPseU_CNN:0;iRNA_PseU:0 15649 chr22 27019290 27019290 1 + G A STAD 27019289 + 27019269 27019309 41 GGAGCTTGGCTTCGAGACTGTGCGATCTTTGAAAGTGCTGA GGAGCTTGGCTTCGAGACTGTACGATCTTTGAAAGTGCTGA < 41bp 0.539865641129523 0.890408332352455 0.3126818 0.6346477 prediction 0.701085382445864 Functional Gain - CRYBA4 ENSG00000196431 CDS Human protein_coding chr22:27019289 chr22:27019290 synonymous SNV . 0 22 hPsi_associated_SNPs_21925 0 0 0 0 1 Cytosol 0.438791013241163 0.438699178749255 0.2692954 0 hPsi_site_15649 iPseU_CNN:0.2692954;iRNA_PseU:0 15650 chr17 46627737 46627737 1 + G A CESC 46627736 + 46627716 46627756 41 GCGCTTCTTGGATTCTACCCTGAGGAGGAGGCGCGTGGTGA GCGCTTCTTGGATTCTACCCTAAGGAGGAGGCGCGTGGTGA < 41bp 0.519115604523708 0.869634200299788 0.34543666 0.46076202 prediction 0.70103719155216 Functional Gain - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46627736 chr17:46627737 stopgain 1.000 1 22 hPsi_associated_SNPs_21926 0 0 1 0 2 Nucleus 0.438718592722973 0.438718589686415 0 0 hPsi_site_15650 iPseU_CNN:0;iRNA_PseU:0 15651 chr1 162745527 162745527 1 + G A UCEC 162745526 + 162745506 162745546 41 TTAGCTGTGTGTATCACTGATGACCCTCTCTGTATGATCAC TTAGCTGTGTGTATCACTGATAACCCTCTCTGTATGATCAC < 41bp 0.455425478471071 0.850518014658985 0.20313656 0.24724284 prediction 0.70103602931797 Functional Gain - DDR2 ENSG00000162733 CDS Human protein_coding chr1:162745526 chr1:162745527 nonsynonymous SNV 0.970 5 22 hPsi_associated_SNPs_21927 0 0 0 0 1 nucleolus 0.438678275230376 0.438178013579409 0 0 hPsi_site_15651 iPseU_CNN:0;iRNA_PseU:0 15652 chr11 57466145 57466145 1 + G A LGG 57466144 + 57466124 57466164 41 AGCTTCCGTTCTCCTACCTTTGGCAAAAGTTTTCACTTCGA AGCTTCCGTTCTCCTACCTTTAGCAAAAGTTTTCACTTCGA < 41bp 0.448784653736453 0.850516257843419 0.27599847 0.33077022 prediction 0.701032515686838 Functional Gain - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57466144 chr11:57466145 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_21928 0 0 1 0 0 Endoplasmic reticulum 0.438718592995167 0.438718610817355 0 0 hPsi_site_15652 iPseU_CNN:0;iRNA_PseU:0 15653 chr3 9768817 9768817 1 + G A SKCM 9768816 + 9768796 9768836 41 GCAATGGAAGAGTTGGACGGTGATGATGTGCGCGTGTCCTC GCAATGGAAGAGTTGGACGGTAATGATGTGCGCGTGTCCTC < 41bp 0.448598434502637 0.850509408355878 0.31067565 0.5684301 prediction 0.701018816711756 Functional Gain - CPNE9 ENSG00000144550 CDS Human protein_coding chr3:9768816 chr3:9768817 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_21929 0 0 0 0 2 exosome 0.438489015480399 0.438718573027211 0.1368602 0 hPsi_site_15653 iPseU_CNN:0.1368602;iRNA_PseU:0 15654 chr7 139030311 139030311 1 + G A COAD 139030310 + 139030290 139030330 41 TCCAAGCTGCCACCTATCTCTGCCTCCTGCGTAGCATCCGG TCCAAGCTGCCACCTATCTCTACCTCCTGCGTAGCATCCGG < 41bp 0.460998836192852 0.850500153274049 0.21503678 0.37402654 prediction 0.701000306548097 Functional Gain - C7orf55-LUC7L2;FMC1 ENSG00000164898;ENSG00000269955 CDS Human other chr7:139030310 chr7:139030311 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_21930 0 0 1 0 1 unknown 0.438720658560544 0.438718604520403 0 0 hPsi_site_15654 iPseU_CNN:0;iRNA_PseU:0 15655 chr9 97177490 97177490 1 + C A GBM 97177489 + 97177469 97177509 41 CCATGCTGCTATTGTCATCTTCCTTGAATTCTTTGCGTGGG CCATGCTGCTATTGTCATCTTACTTGAATTCTTTGCGTGGG < 41bp 0.496176146013262 0.850495858488246 0.20559746 0.67867815 prediction 0.700991716976493 Functional Gain - MFSD14B ENSG00000148110 CDS Human protein_coding chr9:97177489 chr9:97177490 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_21931 0 0 1 0 1 Ribosome 0.438654789473093 0.43866527056356 0.3573563 0 hPsi_site_15655 iPseU_CNN:0.3573563;iRNA_PseU:0 15656 chr19 41094670 41094670 1 + G A STAD 41094669 + 41094649 41094689 41 GATGGGCATGGCGGCTGCAGTGCTGGCAATGACATTGGTGC GATGGGCATGGCGGCTGCAGTACTGGCAATGACATTGGTGC < 41bp 0.455664450930515 0.85049216118841 0.2405046 0.45439214 prediction 0.70098432237682 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41094669 chr19:41094670 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_21932 0 0 1 0 1 Ribosome 0.439403926997665 0.438756441771284 0 0 hPsi_site_15656 iPseU_CNN:0;iRNA_PseU:0 15657 chr7 44801121 44801121 1 + G A rs142653948 44801120 + 44801100 44801140 41 GGTCCTGGAGCCCTTCCGCCTGCAGCACAACCTGGCTGTAA GGTCCTGGAGCCCTTCCGCCTACAGCACAACCTGGCTGTAA < 41bp 0.439429786582265 0.850492128927637 0.31795183 0.7427595 prediction 0.700984257855273 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801120 chr7:44801121 synonymous SNV . 0 22 hPsi_associated_SNPs_21933 0 0 1 0 2 Cytosol 0.438718592995102 0.438718593022392 0.485519 0 hPsi_site_15657 iPseU_CNN:0.485519;iRNA_PseU:0 15658 chr10 26518671 26518671 1 + G A rs52834041 26518670 + 26518650 26518690 41 GTCAAGGAGAAAGGAATGGCTGCTCTTCCCAGGCTCATTGC GTCAAGGAGAAAGGAATGGCTACTCTTCCCAGGCTCATTGC < 41bp 0.538271502407926 0.888759966747953 0.2811042 0.6967875 prediction 0.700976928680054 Functional Gain - GAD2 ENSG00000136750 CDS Human protein_coding chr10:26518670 chr10:26518671 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_21934 0 0 0 0 2 exosome 0.438718588537911 0.43871803412599 0.393575 0 hPsi_site_15658 iPseU_CNN:0.393575;iRNA_PseU:0 15659 chr5 170239053 170239053 1 + G A BLCA 170239052 + 170239032 170239072 41 AAGATCAGCTTTGCCAGCATTGAAATTTCCAGCGACAACGT AAGATCAGCTTTGCCAGCATTAAAATTTCCAGCGACAACGT < 41bp 0.481593523706386 0.850472877577751 0.45203412 0.47483122 prediction 0.700945755155501 Functional Gain - GABRP ENSG00000094755 CDS Human protein_coding chr5:170239052 chr5:170239053 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21935 0 0 0 0 1 Cytosol 0.438151405087526 0.439911039249529 0 0 hPsi_site_15659 iPseU_CNN:0;iRNA_PseU:0 15660 chr5 162900387 162900387 1 + G A KIRC 162900386 + 162900366 162900406 41 ATAATTTGTTTTAATGCAGTTGTGCTTCAGATCAAGTGGAA ATAATTTGTTTTAATGCAGTTATGCTTCAGATCAAGTGGAA < 41bp 0.522385958852386 0.872845630480567 0.30343956 0.46389604 prediction 0.700919343256363 Functional Gain - HMMR ENSG00000072571 CDS Human protein_coding chr5:162900386 chr5:162900387 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_21936 0 0 1 0 1 Cytosol 0.439335973986859 0.438586320431392 0 0 hPsi_site_15660 iPseU_CNN:0;iRNA_PseU:0 15661 chr22 24313566 24313566 1 + G A KIRC 24313565 + 24313545 24313585 41 GGTAAGAAGTCATGTTTGAATGAGGAAGCTCTCTTCATTTA GGTAAGAAGTCATGTTTGAATAAGGAAGCTCTCTTCATTTA < 41bp 0.50736112531012 0.857818769063641 0.43495747 0.7062918 prediction 0.700915287507043 Functional Gain - DDTL ENSG00000099974 CDS Human protein_coding chr22:24313565 chr22:24313566 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_21937 0 0 1 0 1 Ribosome 0.438718591693534 0.438714027530543 0.4125836 0 hPsi_site_15661 iPseU_CNN:0.4125836;iRNA_PseU:0 15662 chr12 107090155 107090155 1 + G A LUAD 107090154 + 107090134 107090174 41 TGGTGAACATTGTCGGCGTGTGTGACTCCATCCTCTACAAA TGGTGAACATTGTCGGCGTGTATGACTCCATCCTCTACAAA < 41bp 0.445319554992944 0.850454013974906 0.5590233 0.8805465 prediction 0.700908027949812 Functional Gain - RFX4 ENSG00000111783 CDS Human protein_coding chr12:107090154 chr12:107090155 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21938 0 0 0 1 3 nucleoplasm 0.438592733203901 0.437731649648225 0.6430464 0 hPsi_site_15662 iPseU_CNN:0.6430464;iRNA_PseU:0 15663 chr19 17330586 17330586 1 + G A LUSC 17330585 + 17330565 17330605 41 CTGCTTCATCTTCATTAGCATGATCCTCTTCATTCGAATCA CTGCTTCATCTTCATTAGCATAATCCTCTTCATTCGAATCA < 41bp 0.481255166326716 0.850426808511162 0.35027158 0.7122205 prediction 0.700853617022324 Functional Gain - USE1 ENSG00000053501 CDS Human protein_coding chr19:17330585 chr19:17330586 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_21939 0 0 1 0 0 Cytosol 0.438722748832295 0.438646336081871 0.424441 0 hPsi_site_15663 iPseU_CNN:0.424441;iRNA_PseU:0 15664 chr2 131486934 131486934 1 + G A KICH 131486933 + 131486913 131486953 41 ACTGGCTGTCAGCCCCCTGCTGCTGGTGACCATCCTGCGGA ACTGGCTGTCAGCCCCCTGCTACTGGTGACCATCCTGCGGA < 41bp 0.526294553949092 0.876719140609309 0.2722359 0.3745286 prediction 0.700849173320433 Functional Gain - GPR148 ENSG00000173302 CDS Human protein_coding chr2:131486933 chr2:131486934 synonymous SNV . 0 22 hPsi_associated_SNPs_21940 0 0 0 0 0 unknown 0.438757411568115 0.438252306374136 0 0 hPsi_site_15664 iPseU_CNN:0;iRNA_PseU:0 15665 chr17 56329583 56329583 1 + G A LGG 56329582 + 56329562 56329602 41 AGGCGGGGACTCAAGGGAAATGCATGCCTTTCTTCCGAGCT AGGCGGGGACTCAAGGGAAATACATGCCTTTCTTCCGAGCT < 41bp 0.543148986923099 0.893556687092209 0.31477782 0.5180418 prediction 0.700815400338219 Functional Gain - LPO ENSG00000167419 CDS Human protein_coding chr17:56329582 chr17:56329583 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21941 0 0 0 0 0 cytosol 0.438718593197827 0.43871859277558 0.0360836 0 hPsi_site_15665 iPseU_CNN:0.0360836;iRNA_PseU:0 15666 chr15 44695174 44695174 1 + G A SKCM 44695173 + 44695153 44695193 41 GGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCA GGGGATGATGGTAACGTAGGTAAGTATGAGGCAGACAAGCA < 41bp 0.530571640134352 0.880975479607645 0.39101803 0.6412095 prediction 0.700807678946585 Functional Gain - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44695173 chr15:44695174 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_21942 0 0 1 0 2 Ribosome 0.438718601219624 0.438719350906809 0.282419 0 hPsi_site_15666 iPseU_CNN:0.282419;iRNA_PseU:0 15667 chr2 176965440 176965440 1 + G A BLCA 176965439 + 176965419 176965459 41 CTGGTTCCAGAACAGGCGTATGAAGAAGAAGCGCGTGGTGC CTGGTTCCAGAACAGGCGTATAAAGAAGAAGCGCGTGGTGC < 41bp 0.480608434964175 0.850402488891034 0.39454886 0.7761413 prediction 0.700804977782069 Functional Gain - HOXD12 ENSG00000170178 CDS Human protein_coding chr2:176965439 chr2:176965440 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_21943 0 0 0 3 0 unknown 0.438718592719218 0.438718550291577 0.5522826 0 hPsi_site_15667 iPseU_CNN:0.5522826;iRNA_PseU:0 15668 chr15 90276307 90276307 1 + C A COAD 90276306 + 90276286 90276326 41 CATTCACTTCCTAAAATATTTCTCGGTCCACAAAGGACAGA CATTCACTTCCTAAAATATTTATCGGTCCACAAAGGACAGA < 41bp 0.500861547611802 0.851254405821673 0.19893616 0.2822586 prediction 0.700785716419741 Functional Gain - WDR93 ENSG00000140527 CDS Human protein_coding chr15:90276306 chr15:90276307 nonsynonymous SNV 0.756 0 22 hPsi_associated_SNPs_21944 0 0 0 0 1 exosome 0.438408210120986 0.438567566660505 0 0 hPsi_site_15668 iPseU_CNN:0;iRNA_PseU:0 15669 chr7 100479722 100479722 1 + G A LUAD 100479721 + 100479701 100479741 41 GGGTGTGCCGCCGCCCGTGATGAAGACCTTCAAGGAGTTTC GGGTGTGCCGCCGCCCGTGATAAAGACCTTCAAGGAGTTTC < 41bp 0.4434979461766 0.850391085412701 0.34936544 0.742167 prediction 0.700782170825401 Functional Gain - SRRT ENSG00000087087 CDS Human protein_coding chr7:100479721 chr7:100479722 nonsynonymous SNV 0.961 1 22 hPsi_associated_SNPs_21945 0 0 1 0 1 Nucleus 0.438718081433802 0.438718589750553 0.484334 0 hPsi_site_15669 iPseU_CNN:0.484334;iRNA_PseU:0 15670 chr7 79082466 79082466 1 + G A UCEC 79082465 + 79082445 79082485 41 CTCCTCCGACACCAATTTGCTGCCGCTCTCATAGGCCACCT CTCCTCCGACACCAATTTGCTACCGCTCTCATAGGCCACCT < 41bp 0.50865759449587 0.859045373885471 0.2906161 0.4596231 prediction 0.700775558779202 Functional Gain - MAGI2 ENSG00000187391 CDS Human protein_coding chr7:79082465 chr7:79082466 synonymous SNV . 0 22 hPsi_associated_SNPs_21946 0 0 0 0 1 cytosol 0.438727918392599 0.438714947373944 0 0 hPsi_site_15670 iPseU_CNN:0;iRNA_PseU:0 15671 chr7 5036442 5036442 1 + G A rs78907407 5036441 + 5036421 5036461 41 TCTTCCCCAGTATGTAGCCCTGCATTTCCTGGGCCTGTGGC TCTTCCCCAGTATGTAGCCCTACATTTCCTGGGCCTGTGGC < 41bp 0.516323105545184 0.866700003390272 0.53034693 0.7193725 prediction 0.700753795690177 Functional Gain - RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036441 chr7:5036442 . . 0 22 hPsi_associated_SNPs_21947 0 0 1 0 0 unknown 0.438718593008019 0.438718593785652 0.37805114 0 hPsi_site_15671 iPseU_CNN:0.37805114;iRNA_PseU:0 15672 chr8 38261986 38261986 1 + G A UCEC 38261985 + 38261965 38262005 41 CGCACCTTCTACCTGATAGATGTGAAGCCCAAGCCGATTGA CGCACCTTCTACCTGATAGATATGAAGCCCAAGCCGATTGA < 41bp 0.521430002932182 0.871805323494066 0.2586271 0.32086217 prediction 0.700750641123767 Functional Gain - LETM2 ENSG00000165046 CDS Human protein_coding chr8:38261985 chr8:38261986 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_21948 0 0 0 0 2 exosome 0.43873122917636 0.438721561262913 0 0 hPsi_site_15672 iPseU_CNN:0;iRNA_PseU:0 15673 chr15 99926566 99926566 1 + G A rs371134191 99926565 + 99926545 99926585 41 TTTACAGAAACCATTTAGATTGATGGGCCTCCCCAAATCTA TTTACAGAAACCATTTAGATTAATGGGCCTCCCCAAATCTA < 41bp 0.493122646086346 0.850372180574524 0.24551013 0.5808083 prediction 0.700744361149048 Functional Gain - LRRC28 ENSG00000168904 UTR3 Human protein_coding chr15:99926565 chr15:99926566 . . 0 22 hPsi_associated_SNPs_21949 0 0 1 0 0 Cytosol 0.438719742767045 0.438718592998175 0.1616166 0 hPsi_site_15673 iPseU_CNN:0.1616166;iRNA_PseU:0 15674 chr19 45322030 45322030 1 + G A rs28399629 45322029 + 45322009 45322049 41 CCTGGGCGATGGCCCCATGCTGTCGCTCAGTTCTATCACCT CCTGGGCGATGGCCCCATGCTATCGCTCAGTTCTATCACCT < 41bp 0.45255410200743 0.850370266216875 0.38492295 0.71841997 prediction 0.70074053243375 Functional Gain - BCAM ENSG00000187244 CDS Human protein_coding chr19:45322029 chr19:45322030 synonymous SNV . 0 22 hPsi_associated_SNPs_21950 0 0 0 0 1 cytosol 0.438723130811067 0.438720288989997 0.43683994 0 hPsi_site_15674 iPseU_CNN:0.43683994;iRNA_PseU:0 15675 chr7 141871135 141871135 1 + G A UCEC 141871134 + 141871114 141871154 41 TCTCTCCATTTCTACGCGTCTGCCGTCCCAGTACATCTATG TCTCTCCATTTCTACGCGTCTACCGTCCCAGTACATCTATG < 41bp 0.482319900738893 0.850366829361652 0.244719 0.32017565 prediction 0.700733658723304 Functional Gain - MGAM2 ENSG00000257743 CDS Human protein_coding chr7:141871134 chr7:141871135 synonymous SNV . 0 22 hPsi_associated_SNPs_21951 0 0 0 0 0 exosome 0.438718782288251 0.438718895074776 0 0 hPsi_site_15675 iPseU_CNN:0;iRNA_PseU:0 15676 chrX 47058959 47058959 1 + G A PAAD 47058958 + 47058938 47058978 41 CGCTGAGCTCAACAGCTATGTGCCTGTCACTGCCTACACTG CGCTGAGCTCAACAGCTATGTACCTGTCACTGCCTACACTG < 41bp 0.447209306963738 0.850363646830038 0.1618709 0.89643395 prediction 0.700727293660075 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47058958 chrX:47058959 synonymous SNV . 0 22 hPsi_associated_SNPs_21952 0 0 1 0 2 Nucleus 0.441556248109436 0.438661603038775 0.7928679 0 hPsi_site_15676 iPseU_CNN:0.7928679;iRNA_PseU:0 15677 chr12 58007140 58007140 1 + C T SKCM 58007141 - 58007121 58007161 41 CCAGAGCCTGTCCTCACACCTGCGTCTTATCTCCAGGGCCC CCAGAGCCTGTCCTCACACCTACGTCTTATCTCCAGGGCCC < 41bp 0.520954962616651 0.871316012006958 0.27169728 0.5475737 prediction 0.700722098780614 Functional Gain - ARHGEF25 ENSG00000240771 CDS Human protein_coding chr12:58007141 chr12:58007140 stopgain 0.315 0 22 hPsi_associated_SNPs_21953 0 0 0 0 0 chromatin 0.438718530088326 0.4386960472808 0.0951474000000001 0 hPsi_site_15677 iPseU_CNN:0.0951474000000001;iRNA_PseU:0 15678 chr18 59217241 59217241 1 + C A LIHC 59217240 + 59217220 59217260 41 CACGGATTCTAACCAGGAGGTCTGGTTTCCGGCAGCAGGAG CACGGATTCTAACCAGGAGGTATGGTTTCCGGCAGCAGGAG < 41bp 0.49941811435002 0.850354797437112 0.30976474 0.62900263 prediction 0.700709594874223 Functional Gain - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59217240 chr18:59217241 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_21954 0 0 0 0 1 nucleus 0.438718593116601 0.438718592995108 0.25800526 0 hPsi_site_15678 iPseU_CNN:0.25800526;iRNA_PseU:0 15679 chr14 24517975 24517975 1 + G A LUSC 24517974 + 24517954 24517994 41 GGCCCCAAGGAACATTAGGGTGAACTGCCTAGCACCTGGAC GGCCCCAAGGAACATTAGGGTAAACTGCCTAGCACCTGGAC < 41bp 0.519266805664624 0.869618484912533 0.49379876 0.82268643 prediction 0.700703358495819 Functional Gain - DHRS4L1 ENSG00000225766 ncRNA_exonic Human processed_transcript chr14:24517974 chr14:24517975 . . 0 22 hPsi_associated_SNPs_21955 0 0 0 0 1 unknown 0.438718592995102 0.438718592995102 0.64537286 0 hPsi_site_15679 iPseU_CNN:0.64537286;iRNA_PseU:0 15680 chr9 5747390 5747390 1 + C A rs41280731 5747389 + 5747369 5747409 41 AAACCCAGAATCCCAGGAGTTCTTCAACACACTCTGAGCAT AAACCCAGAATCCCAGGAGTTATTCAACACACTCTGAGCAT < 41bp 0.499371097464489 0.85034998180629 0.61563116 0.91561556 prediction 0.700699963612579 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5747389 chr9:5747390 nonsynonymous SNV 0.962 0 22 hPsi_associated_SNPs_21956 0 0 1 0 0 Nucleus 0.438718761976454 0.438724369860986 0.5999688 0 hPsi_site_15680 iPseU_CNN:0.5999688;iRNA_PseU:0 15681 chr13 50204595 50204595 1 + G A CESC 50204594 + 50204574 50204614 41 AGTGGCCACCATGGGTTCTGTGAATTCCAGAGGTCACAAGG AGTGGCCACCATGGGTTCTGTAAATTCCAGAGGTCACAAGG < 41bp 0.466668314803337 0.850349000406056 0.4078738 0.59166265 prediction 0.700698000812111 Functional Gain - ARL11 ENSG00000152213 CDS Human protein_coding chr13:50204594 chr13:50204595 synonymous SNV . 0 22 hPsi_associated_SNPs_21957 0 0 1 0 1 Nucleus 0.438677100752602 0.438718481273944 0.1833253 0 hPsi_site_15681 iPseU_CNN:0.1833253;iRNA_PseU:0 15682 chr12 125509729 125509729 1 + G A STAD 125509728 + 125509708 125509748 41 TCGTCCTGTTTTCCATGTCCTGCGTGTACATCCTGCACAAG TCGTCCTGTTTTCCATGTCCTACGTGTACATCCTGCACAAG < 41bp 0.535636789145314 0.885984584308389 0.12963659 0.27029467 prediction 0.70069559032615 Functional Gain - BRI3BP ENSG00000184992 CDS Human protein_coding chr12:125509728 chr12:125509729 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_21958 0 0 1 0 0 Ribosome 0.43872117930605 0.43887827300504 0 0 hPsi_site_15682 iPseU_CNN:0;iRNA_PseU:0 15683 chr11 65649985 65649985 1 + G A CESC 65649984 + 65649964 65650004 41 AGTTTCTGGGATTTTGTGGATGTCTCCGTGCAGGGTAGGGT AGTTTCTGGGATTTTGTGGATATCTCCGTGCAGGGTAGGGT < 41bp 0.53541928587472 0.885762341403781 0.34658018 0.5012033 prediction 0.700686111058122 Functional Gain - CTSW ENSG00000172543 CDS Human protein_coding chr11:65649984 chr11:65649985 nonsynonymous SNV 0.715 1 22 hPsi_associated_SNPs_21959 0 0 0 0 1 exosome 0.438718545111415 0.438718594684902 0.00240660000000004 0 hPsi_site_15683 iPseU_CNN:0.00240660000000004;iRNA_PseU:0 15684 chr1 110709720 110709720 1 + G A rs12737742 110709719 + 110709699 110709739 41 GCGGTGGAGGAGGAGCTGGATGCAGAGGACCGGCCGGCCTG GCGGTGGAGGAGGAGCTGGATACAGAGGACCGGCCGGCCTG < 41bp 0.535660367347533 0.885996966863458 0.27309075 0.52200353 prediction 0.700673199031851 Functional Gain - SLC6A17 ENSG00000197106 CDS Human protein_coding chr1:110709719 chr1:110709720 nonsynonymous SNV 0.976 0 22 hPsi_associated_SNPs_21960 0 0 0 0 0 exosome 0.438718592179365 0.438718644776015 0.04400706 0 hPsi_site_15684 iPseU_CNN:0.04400706;iRNA_PseU:0 15685 chr14 20586399 20586399 1 + G A SKCM 20586398 + 20586378 20586418 41 GACTGCTCACATCACAGTGGTGATTCTCTTCTTTGGCCCAT GACTGCTCACATCACAGTGGTAATTCTCTTCTTTGGCCCAT < 41bp 0.477928681207145 0.85033657478872 0.28011763 0.6405421 prediction 0.700673149577439 Functional Gain - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586398 chr14:20586399 synonymous SNV . 0 22 hPsi_associated_SNPs_21961 0 0 0 0 0 unknown 0.438543845370672 0.438718583515131 0.2810842 0 hPsi_site_15685 iPseU_CNN:0.2810842;iRNA_PseU:0 15686 chr12 100795601 100795601 1 + G A rs11568545 100795600 + 100795580 100795620 41 CATGCCCCTGGCTGGGGTGTTGGTGCAGTACATTGGATGGT CATGCCCCTGGCTGGGGTGTTAGTGCAGTACATTGGATGGT < 41bp 0.446263098916969 0.850335777009236 0.26941603 0.40712756 prediction 0.700671554018472 Functional Gain - SLC17A8 ENSG00000179520 CDS Human protein_coding chr12:100795600 chr12:100795601 synonymous SNV . 0 22 hPsi_associated_SNPs_21962 1 0 0 0 2 exosome 0.438719049496444 0.437820735101771 0 0 hPsi_site_15686 iPseU_CNN:0;iRNA_PseU:0 15687 chr19 3179318 3179318 1 + G A HNSC 3179317 + 3179297 3179337 41 CTGGCTGCTGGCCGCGCTGCTGGGGATGCTGCCTTTGCTGG CTGGCTGCTGGCCGCGCTGCTAGGGATGCTGCCTTTGCTGG < 41bp 0.473355294978083 0.850335234559592 0.22928491 0.62032163 prediction 0.700670469119184 Functional Gain - S1PR4 ENSG00000125910 CDS Human protein_coding chr19:3179317 chr19:3179318 synonymous SNV . 0 22 hPsi_associated_SNPs_21963 0 0 0 0 0 exosome 0.438718757991375 0.438718606818708 0.24064326 0 hPsi_site_15687 iPseU_CNN:0.24064326;iRNA_PseU:0 15688 chr10 124268201 124268201 1 + G A LUSC 124268200 + 124268180 124268220 41 AGTGATTGGAATTAACACTTTGAAAGTGACAGCTGGAATCT AGTGATTGGAATTAACACTTTAAAAGTGACAGCTGGAATCT < 41bp 0.456111981876594 0.850333600892887 0.23456264 0.26050484 prediction 0.700667201785774 Functional Gain - HTRA1 ENSG00000166033 CDS Human protein_coding chr10:124268200 chr10:124268201 synonymous SNV . 0 22 hPsi_associated_SNPs_21964 0 0 1 0 2 Ribosome 0.437933006896539 0.437861622283041 0 0 hPsi_site_15688 iPseU_CNN:0;iRNA_PseU:0 15689 chr12 53498956 53498956 1 + G A UCEC 53498955 + 53498935 53498975 41 GGAGCTGCTGGATCGGGCCATGCGGGAGGCTATACAATCCT GGAGCTGCTGGATCGGGCCATACGGGAGGCTATACAATCCT < 41bp 0.44403902927589 0.850331227476799 0.27484602 0.6860361 prediction 0.700662454953598 Functional Gain - SOAT2 ENSG00000167780 CDS Human protein_coding chr12:53498955 chr12:53498956 nonsynonymous SNV 0.133 0 22 hPsi_associated_SNPs_21965 0 0 1 0 2 cytosol 0.438713847665351 0.438710820042253 0.3720722 0 hPsi_site_15689 iPseU_CNN:0.3720722;iRNA_PseU:0 15690 chr6 44275091 44275091 1 + G A STAD 44275090 + 44275070 44275110 41 GTGTCTGTGCGCCCCTCGTCTGCCACCCCTACTCGGCCCAA GTGTCTGTGCGCCCCTCGTCTACCACCCCTACTCGGCCCAA < 41bp 0.444957914491796 0.850327461662507 0.3979747 0.71639454 prediction 0.700654923325015 Functional Gain - AARS2 ENSG00000124608 CDS Human protein_coding chr6:44275090 chr6:44275091 nonsynonymous SNV 0.848 1 22 hPsi_associated_SNPs_21966 0 0 0 0 0 Endoplasmic reticulum 0.438716929866798 0.438716855858384 0.43278908 0 hPsi_site_15690 iPseU_CNN:0.43278908;iRNA_PseU:0 15691 chrX 103359063 103359063 1 + G A SKCM 103359062 + 103359042 103359082 41 GGAAAAACTCAAGCGCTTGATGAAAACACTTAGGGGCCCTG GGAAAAACTCAAGCGCTTGATAAAAACACTTAGGGGCCCTG < 41bp 0.454796751884946 0.850326502401698 0.19072801 0.23197746 prediction 0.700653004803397 Functional Gain - ZCCHC18 ENSG00000166707 CDS Human protein_coding chrX:103359062 chrX:103359063 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_21967 0 0 0 0 0 exosome 0.438719801527736 0.438718592684273 0 0 hPsi_site_15691 iPseU_CNN:0;iRNA_PseU:0 15692 chr1 43826470 43826470 1 + G A BLCA 43826469 + 43826449 43826489 41 AGAACACCATGTGGCCACACTGAGTGGCCACAGCCAGGAAG AGAACACCATGTGGCCACACTAAGTGGCCACAGCCAGGAAG < 41bp 0.487036011511554 0.850323273848875 0.29870108 0.73632604 prediction 0.70064654769775 Functional Gain - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43826469 chr1:43826470 synonymous SNV . 0 22 hPsi_associated_SNPs_21968 0 0 1 0 1 Ribosome 0.432085523685241 0.438718596731117 0.47265208 0 hPsi_site_15692 iPseU_CNN:0.47265208;iRNA_PseU:0 15693 chr4 4864435 4864435 1 + G A CESC 4864434 + 4864414 4864454 41 CTTTCGGCCCTCAGGGCGGCTGAGCCCCCCAGCCTGCACCC CTTTCGGCCCTCAGGGCGGCTAAGCCCCCCAGCCTGCACCC < 41bp 0.533001470704995 0.883323640926911 0.19275549 0.38171616 prediction 0.700644340443831 Functional Gain - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864434 chr4:4864435 synonymous SNV . 0 22 hPsi_associated_SNPs_21969 0 0 1 0 1 Cytosol 0.43871857710075 0.438718597208888 0 0 hPsi_site_15693 iPseU_CNN:0;iRNA_PseU:0 15694 chr22 21363084 21363084 1 + C T rs143177348 21363085 - 21363065 21363105 41 CCAACCAGTTTGTGGACTGGTGTCCGATTGGATTTAAGGTA CCAACCAGTTTGTGGACTGGTATCCGATTGGATTTAAGGTA < 41bp 0.512271902463839 0.862593170601081 0.31198534 0.6492635 prediction 0.700642536274485 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363085 chr22:21363084 . . 0 22 hPsi_associated_SNPs_21970 0 0 1 0 0 unknown 0.438718592995102 0.438718592995102 0.298527 0 hPsi_site_15694 iPseU_CNN:0.298527;iRNA_PseU:0 15695 chr4 190884260 190884260 1 + G A BLCA 190884259 + 190884239 190884279 41 TTTAAACAGGAGAGCCAAATTGAAAGCCGACAGATACTGCA TTTAAACAGGAGAGCCAAATTAAAAGCCGACAGATACTGCA < 41bp 0.509619130151952 0.859927763034494 0.19720787 0.23433825 prediction 0.700617265765086 Functional Gain - FRG1 ENSG00000109536 CDS Human protein_coding chr4:190884259 chr4:190884260 synonymous SNV . 0 22 hPsi_associated_SNPs_21971 0 0 1 0 1 Cytosol 0.438718592999219 0.438716331664797 0 0 hPsi_site_15695 iPseU_CNN:0;iRNA_PseU:0 15696 chr12 49373305 49373305 1 + G A rs181106181 49373304 + 49373284 49373324 41 GCTTACAGACTCCAAGAGTCTGCAACTGGTACTCGAGCCCA GCTTACAGACTCCAAGAGTCTACAACTGGTACTCGAGCCCA < 41bp 0.537067179879739 0.887373480528898 0.12222624 0.24277908 prediction 0.700612601298318 Functional Gain - WNT1 ENSG00000125084 CDS Human protein_coding chr12:49373304 chr12:49373305 synonymous SNV . 0 22 hPsi_associated_SNPs_21972 0 0 0 0 1 exosome 0.4387231108149 0.438747198375868 0 0 hPsi_site_15696 iPseU_CNN:0;iRNA_PseU:0 15697 chr9 124535054 124535054 1 + G A LIHC 124535053 + 124535033 124535073 41 TGGCAAGAGCCTCTCCATGGTGGACCTCCAGGACGCCCGCA TGGCAAGAGCCTCTCCATGGTAGACCTCCAGGACGCCCGCA < 41bp 0.450387748290564 0.850301706617236 0.2002962 0.3446666 prediction 0.700603413234472 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124535053 chr9:124535054 synonymous SNV . 0 22 hPsi_associated_SNPs_21973 0 0 0 0 0 Ribosome 0.438645150690903 0.438718592995094 0 0 hPsi_site_15697 iPseU_CNN:0;iRNA_PseU:0 15698 chr1 12835013 12835013 1 + G A SKCM 12835012 + 12834992 12835032 41 TTTCTCTAGATTCATCAGGATGAGCCTCCAGGCCCCACCTA TTTCTCTAGATTCATCAGGATAAGCCTCCAGGCCCCACCTA < 41bp 0.489755863473531 0.850282193641234 0.28907096 0.66136163 prediction 0.700564387282468 Functional Gain - PRAMEF12 ENSG00000116726 CDS Human protein_coding chr1:12835012 chr1:12835013 nonsynonymous SNV 0.080 3 22 hPsi_associated_SNPs_21974 0 0 0 0 0 unknown 0.438718592995102 0.438718593019858 0.32272326 0 hPsi_site_15698 iPseU_CNN:0.32272326;iRNA_PseU:0 15699 chr20 23345114 23345114 1 + G A LUAD 23345113 + 23345093 23345133 41 CGCCTCCTGGGTCACCTGTGTGACGTGACAGTCAGCGTGGA CGCCTCCTGGGTCACCTGTGTAACGTGACAGTCAGCGTGGA < 41bp 0.459795704492737 0.850281487175519 0.39200222 0.7169197 prediction 0.700562974351038 Functional Gain - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23345113 chr20:23345114 nonsynonymous SNV 0.944 2 22 hPsi_associated_SNPs_21975 0 0 1 0 0 Cytosol 0.438727784365359 0.438686274021889 0.4338394 0 hPsi_site_15699 iPseU_CNN:0.4338394;iRNA_PseU:0 15700 chr19 38573210 38573210 1 + G A rs139865930 38573209 + 38573189 38573229 41 GGAAGCCAGCAGGCCGTGGGTGTGTCAGAAGAGCTTCGCCC GGAAGCCAGCAGGCCGTGGGTATGTCAGAAGAGCTTCGCCC < 41bp 0.466363566259228 0.850278557889866 0.39166918 0.78999174 prediction 0.700557115779733 Functional Gain - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573209 chr19:38573210 synonymous SNV . 0 22 hPsi_associated_SNPs_21976 0 0 0 0 0 Ribosome 0.438718641907402 0.438719239138743 0.57998348 0 hPsi_site_15700 iPseU_CNN:0.57998348;iRNA_PseU:0 15701 chr5 140032710 140032710 1 + G A OV 140032709 + 140032689 140032729 41 ACCACAGCTAACTATAGGGCTGTTGGCCCCACTGCTGAGGC ACCACAGCTAACTATAGGGCTATTGGCCCCACTGCTGAGGC < 41bp 0.539161525158712 0.889430976691713 0.4543187 0.8264079 prediction 0.700538903066001 Functional Gain - IK ENSG00000113141 CDS Human protein_coding chr5:140032709 chr5:140032710 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_21977 0 0 1 0 1 Cytosol 0.43872811563363 0.438715287164956 0.6528158 0 hPsi_site_15701 iPseU_CNN:0.6528158;iRNA_PseU:0 15702 chr15 85664189 85664189 1 + G A LIHC 85664188 + 85664168 85664208 41 GGAGAGCCACCATGCGGCCTTGGCCTTCCAGCTGACCACTG GGAGAGCCACCATGCGGCCTTAGCCTTCCAGCTGACCACTG < 41bp 0.452188808477274 0.85026831655823 0.16960326 0.24819142 prediction 0.70053663311646 Functional Gain - PDE8A ENSG00000073417 CDS Human protein_coding chr15:85664188 chr15:85664189 synonymous SNV . 0 22 hPsi_associated_SNPs_21978 0 0 0 0 1 Ribosome 0.438718592996009 0.438723523968117 0 0 hPsi_site_15702 iPseU_CNN:0;iRNA_PseU:0 15703 chr20 371973 371973 1 + G A ESCA 371972 + 371952 371992 41 CTGGCCGTGCTGGAGCCCTATGCGCGGCTGCCCCCGCACAA CTGGCCGTGCTGGAGCCCTATACGCGGCTGCCCCCGCACAA < 41bp 0.44686440699506 0.850258707390733 0.36560318 0.75747824 prediction 0.700517414781465 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:371972 chr20:371973 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_21979 0 0 1 0 1 Ribosome 0.438718592595085 0.438718592998374 0.51495648 0 hPsi_site_15703 iPseU_CNN:0.51495648;iRNA_PseU:0 15704 chr20 31685467 31685467 1 + C A BLCA 31685466 + 31685446 31685486 41 CTGCCCACTTATCATCAGGATCCAGGTGCTGAACCCACCAT CTGCCCACTTATCATCAGGATACAGGTGCTGAACCCACCAT < 41bp 0.500212516474674 0.850463829161244 0.33221418 0.69147086 prediction 0.70050262537314 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31685466 chr20:31685467 synonymous SNV . 0 22 hPsi_associated_SNPs_21980 0 0 0 0 1 exosome 0.43871859299657 0.438345561658665 0.38294172 0 hPsi_site_15704 iPseU_CNN:0.38294172;iRNA_PseU:0 15705 chr9 130913928 130913928 1 + G A PRAD 130913927 + 130913907 130913947 41 CCCTCCCAAGGAAAAAGAAGTGTGACTACTGGATCAGGACT CCCTCCCAAGGAAAAAGAAGTATGACTACTGGATCAGGACT < 41bp 0.472990477687427 0.850248735871192 0.51162815 0.64681184 prediction 0.700497471742383 Functional Gain - LCN2 ENSG00000148346 CDS Human protein_coding chr9:130913927 chr9:130913928 nonsynonymous SNV 0.013 3 22 hPsi_associated_SNPs_21981 0 0 0 0 1 Endoplasmic reticulum 0.438738891068025 0.438718593825985 0.27036738 0 hPsi_site_15705 iPseU_CNN:0.27036738;iRNA_PseU:0 15706 chr11 45891899 45891899 1 + G A LUSC 45891898 + 45891878 45891918 41 CAGGCGATACCTGCCCAAATTGAAAGCGTTCCCCTCTCGAT CAGGCGATACCTGCCCAAATTAAAAGCGTTCCCCTCTCGAT < 41bp 0.4538832279468 0.850248735165409 0.48824182 0.646552 prediction 0.700497470330818 Functional Gain - CRY2 ENSG00000121671 CDS Human protein_coding chr11:45891898 chr11:45891899 synonymous SNV . 0 22 hPsi_associated_SNPs_21982 0 0 0 0 1 Nucleus 0.438718592994742 0.438718592939504 0.293104 0 hPsi_site_15706 iPseU_CNN:0.293104;iRNA_PseU:0 15707 chr7 44802942 44802942 1 + C A BLCA 44802941 + 44802921 44802961 41 AGCAGACAGCTATCAAGGTGTCCCTGAAGTGCCCCATCACC AGCAGACAGCTATCAAGGTGTACCTGAAGTGCCCCATCACC < 41bp 0.490882478814878 0.85024642394114 0.14585361 0.49695238 prediction 0.70049284788228 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802941 chr7:44802942 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_21983 0 0 1 0 2 Cytosol 0.438718593387811 0.438718590972653 0 0 hPsi_site_15707 iPseU_CNN:0;iRNA_PseU:0 15708 chr1 42621240 42621240 1 + G A SKCM 42621239 + 42621219 42621259 41 CGACGACTGTGAGCTGTGTGTGAACGTTGCGTGTACCGGCT CGACGACTGTGAGCTGTGTGTAAACGTTGCGTGTACCGGCT < 41bp 0.480988625499771 0.850246293457453 0.13817772 0.54897666 prediction 0.700492586914907 Functional Gain - GUCA2B ENSG00000044012 CDS Human protein_coding chr1:42621239 chr1:42621240 synonymous SNV . 0 22 hPsi_associated_SNPs_21984 0 0 0 0 1 exosome 0.438072410068876 0.43972969413028 0.09795332 0 hPsi_site_15708 iPseU_CNN:0.09795332;iRNA_PseU:0 15709 chr3 119305163 119305163 1 + G A LUSC 119305162 + 119305142 119305182 41 GGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATG GGTGCACAACGCCATGCAGCTAAAGCCGGGCAAGCCCAATG < 41bp 0.450379918617303 0.850240348425661 0.3380354 0.6443681 prediction 0.700480696851322 Functional Gain - ADPRH ENSG00000144843 CDS Human protein_coding chr3:119305162 chr3:119305163 synonymous SNV . 0 22 hPsi_associated_SNPs_21985 0 0 0 0 1 exosome 0.438716926361598 0.438745549537973 0.2887362 0 hPsi_site_15709 iPseU_CNN:0.2887362;iRNA_PseU:0 15710 chr13 49281729 49281729 1 + G A COAD 49281728 + 49281708 49281748 41 CCTTGATCATCTTCTTCTTGTGTTTCCTGCCCTATCACACA CCTTGATCATCTTCTTCTTGTATTTCCTGCCCTATCACACA < 41bp 0.465324002830323 0.850239147592167 0.3652873 0.54484034 prediction 0.700478295184334 Functional Gain - CYSLTR2 ENSG00000152207 CDS Human protein_coding chr13:49281728 chr13:49281729 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_21986 0 0 0 0 0 exosome 0.438718592993962 0.438718592995099 0.0896806800000001 0 hPsi_site_15710 iPseU_CNN:0.0896806800000001;iRNA_PseU:0 15711 chr5 43653222 43653222 1 + G A UCEC 43653221 + 43653201 43653241 41 GCACTGGGCATGATTGGGGTTGCTGGAGGACTGGCAGCCAC GCACTGGGCATGATTGGGGTTACTGGAGGACTGGCAGCCAC < 41bp 0.439309692636345 0.850237378484591 0.31334233 0.44931287 prediction 0.700474756969183 Functional Gain - NNT ENSG00000112992 CDS Human protein_coding chr5:43653221 chr5:43653222 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_21987 0 0 1 0 1 Endoplasmic reticulum 0.43872764199475 0.438785046160814 0 0 hPsi_site_15711 iPseU_CNN:0;iRNA_PseU:0 15712 chr19 49671207 49671207 1 + G A rs113984787 49671206 + 49671186 49671226 41 TCTGACCGAACGGATCCAGCTGCAGTTTATAGTCTGGTCAC TCTGACCGAACGGATCCAGCTACAGTTTATAGTCTGGTCAC < 41bp 0.531055168790538 0.881280300329452 0.26369014 0.38144282 prediction 0.700450263077828 Functional Gain - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671206 chr19:49671207 nonsynonymous SNV 0.892 0 22 hPsi_associated_SNPs_21988 2 0 1 0 1 chromatin 0.43935234542348 0.438716929728634 0 0 hPsi_site_15712 iPseU_CNN:0;iRNA_PseU:0 15713 chr2 85529703 85529703 1 + C A OV 85529702 + 85529682 85529722 41 CACTTCTCCCCCGGCTCCCCTCCCACCCACCTCTCCCCAGA CACTTCTCCCCCGGCTCCCCTACCACCCACCTCTCCCCAGA < 41bp 0.502172373674638 0.852386298870319 0.4390929 0.7205683 prediction 0.700427850391362 Functional Gain - TCF7L1 ENSG00000152284 CDS Human protein_coding chr2:85529702 chr2:85529703 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_21989 0 0 0 0 2 Endoplasmic reticulum 0.438698220146119 0.435069603516088 0.4411366 0 hPsi_site_15713 iPseU_CNN:0.4411366;iRNA_PseU:0 15714 chr12 57389192 57389192 1 + G A OV 57389191 + 57389171 57389211 41 TACCTGGCCATGTTTGTGGTTGGGCTGGTGGAGAACCTCCT TACCTGGCCATGTTTGTGGTTAGGCTGGTGGAGAACCTCCT < 41bp 0.540097452166167 0.890310045964951 0.25958645 0.2668551 prediction 0.700425187597566 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389191 chr12:57389192 nonsynonymous SNV 0.941 4 22 hPsi_associated_SNPs_21990 0 0 0 0 0 nucleus 0.438609731555028 0.438751308255995 0 0 hPsi_site_15714 iPseU_CNN:0;iRNA_PseU:0 15715 chr9 2718219 2718219 1 + G A LUSC 2718218 + 2718198 2718238 41 CGACCCGGCCGTCTTCCAGCTGGTCTACAATTTCTACCTGT CGACCCGGCCGTCTTCCAGCTAGTCTACAATTTCTACCTGT < 41bp 0.460609843870788 0.85021095802217 0.2698692 0.4820991 prediction 0.700421916044339 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718218 chr9:2718219 synonymous SNV . 0 22 hPsi_associated_SNPs_21991 0 0 0 0 0 insoluble cytoplasm 0.438763016286172 0.438718233024262 0 0 hPsi_site_15715 iPseU_CNN:0;iRNA_PseU:0 15716 chr16 70806018 70806018 1 + G A UCEC 70806017 + 70805997 70806037 41 AAACAAGCCACTTACCTGGCTGCAGTGAAGACACTGATGCC AAACAAGCCACTTACCTGGCTACAGTGAAGACACTGATGCC < 41bp 0.526463506585059 0.876667072801216 0.21040958 0.64781326 prediction 0.700407132432316 Functional Gain - VAC14 ENSG00000103043 CDS Human protein_coding chr16:70806017 chr16:70806018 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_21992 0 0 0 0 0 Ribosome 0.439960123355298 0.425523974701991 0.29562652 0 hPsi_site_15716 iPseU_CNN:0.29562652;iRNA_PseU:0 15717 chr1 116605463 116605463 1 + G A UCEC 116605462 + 116605442 116605482 41 ATCAGTGCTGCCTTTAACATTGTTTATATCTACACCTCTGA ATCAGTGCTGCCTTTAACATTATTTATATCTACACCTCTGA < 41bp 0.457295258198244 0.850198680043199 0.29720765 0.32095367 prediction 0.700397360086399 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116605462 chr1:116605463 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_21993 0 0 1 0 2 cytosol 0.438684948745518 0.43871003691286 0 0 hPsi_site_15717 iPseU_CNN:0;iRNA_PseU:0 15718 chr3 98109914 98109914 1 + G A SKCM 98109913 + 98109893 98109933 41 CCCACTGCAGTACCACACCATGATGTCCAAGACACTCTGCA CCCACTGCAGTACCACACCATAATGTCCAAGACACTCTGCA < 41bp 0.515385152162994 0.865583412529981 0.14759287 0.2262001 prediction 0.700396520733974 Functional Gain - OR5K3 ENSG00000206536 CDS Human protein_coding chr3:98109913 chr3:98109914 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_21994 0 0 0 0 0 unknown 0.438627519743447 0.43870998929832 0 0 hPsi_site_15718 iPseU_CNN:0;iRNA_PseU:0 15719 chr16 89293162 89293162 1 + G A CESC 89293161 + 89293141 89293181 41 CAGTGTGGAGAAGCTTTCAGTGAACACTCAGGCCTCAGCAC CAGTGTGGAGAAGCTTTCAGTAAACACTCAGGCCTCAGCAC < 41bp 0.522449372102856 0.872640838232088 0.25775486 0.31400323 prediction 0.700382932258464 Functional Gain - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89293161 chr16:89293162 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21995 0 0 0 0 1 chromatin 0.438718466829174 0.438667404248602 0 0 hPsi_site_15719 iPseU_CNN:0;iRNA_PseU:0 15720 chr2 133402949 133402949 1 + G A rs61735719 133402948 + 133402928 133402968 41 GAGAAGCGCCTGCGCGTACATGCGCACTCCACCACCGACAG GAGAAGCGCCTGCGCGTACATACGCACTCCACCACCGACAG < 41bp 0.522428373598831 0.872618772660521 0.3236196 0.8466073 prediction 0.70038079812338 Functional Gain - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402948 chr2:133402949 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_21996 1 0 0 0 0 nucleus 0.438719393675727 0.438683169304054 0.6932146 0 hPsi_site_15720 iPseU_CNN:0.6932146;iRNA_PseU:0 15721 chr12 52374849 52374849 1 + G A BRCA 52374848 + 52374828 52374868 41 GGGAAGTATGGCGGGGCCGCTGGAGGGGTGGTGATGTGGCT GGGAAGTATGGCGGGGCCGCTAGAGGGGTGGTGATGTGGCT < 41bp 0.449385975537407 0.850172069468633 0.24070102 0.3292106 prediction 0.700344138937265 Functional Gain - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52374848 chr12:52374849 stopgain 1.000 1 22 hPsi_associated_SNPs_21997 0 0 0 0 0 Endoplasmic reticulum 0.438718592994762 0.438718592995102 0 0 hPsi_site_15721 iPseU_CNN:0;iRNA_PseU:0 15722 chr4 134084195 134084195 1 + G A HNSC 134084194 + 134084174 134084214 41 TGGGCCACTCAGATCGGTGCTGGATGCCTTCTTTTGTCCCT TGGGCCACTCAGATCGGTGCTAGATGCCTTCTTTTGTCCCT < 41bp 0.452693487041742 0.850161356952326 0.6589822 0.8040791 prediction 0.700322713904652 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134084194 chr4:134084195 stopgain 1.000 0 22 hPsi_associated_SNPs_21998 0 0 0 0 1 cytosol 0.438752585397161 0.438793551865106 0.2901938 0 hPsi_site_15722 iPseU_CNN:0.2901938;iRNA_PseU:0 15723 chr11 67201938 67201938 1 + G A COAD 67201937 + 67201917 67201957 41 GACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGT GACACAGCCCTCAGCGAGAGTACCAACCAGGCCTTCCTGGT < 41bp 0.447314650285027 0.850158224323932 0.22436786 0.5217681 prediction 0.700316448647864 Functional Gain - RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67201937 chr11:67201938 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_21999 0 0 1 2 2 Ribosome 0.438714467631896 0.438717474701259 0.0435361999999999 0 hPsi_site_15723 iPseU_CNN:0.0435361999999999;iRNA_PseU:0 15724 chrX 136651176 136651176 1 + G A COAD 136651175 + 136651155 136651195 41 CAAGCCCTATATCTGCAAAGTGTGCGACAAGTCCTACACGC CAAGCCCTATATCTGCAAAGTATGCGACAAGTCCTACACGC < 41bp 0.458236818066759 0.850155863523184 0.6860756 0.85400105 prediction 0.700311727046367 Functional Gain - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136651175 chrX:136651176 synonymous SNV . 0 22 hPsi_associated_SNPs_22000 0 0 1 0 1 exosome 0.438736820273343 0.438727104981861 0.3358509 0 hPsi_site_15724 iPseU_CNN:0.3358509;iRNA_PseU:0 15725 chr11 55433251 55433251 1 + G A SKCM 55433250 + 55433230 55433270 41 AGTTACCCTCAACAGTGGGATGATGTGTGTGGCCATCTTTC AGTTACCCTCAACAGTGGGATAATGTGTGTGGCCATCTTTC < 41bp 0.487642881883575 0.850155127737043 0.20513457 0.27030325 prediction 0.700310255474087 Functional Gain - OR4C6 ENSG00000181903 CDS Human protein_coding chr11:55433250 chr11:55433251 nonsynonymous SNV 0.322 0 22 hPsi_associated_SNPs_22001 0 0 0 0 0 unknown 0.437836053601048 0.438718538837396 0 0 hPsi_site_15725 iPseU_CNN:0;iRNA_PseU:0 15726 chr1 11733894 11733894 1 + G A rs140436527 11733893 + 11733873 11733913 41 CAATCGCCCTACCGAGCTGTTGTCCAGATTTTCTGACAGCT CAATCGCCCTACCGAGCTGTTATCCAGATTTTCTGACAGCT < 41bp 0.489182793745515 0.850147557938604 0.41119105 0.6418214 prediction 0.700295115877207 Functional Gain - FBXO6 ENSG00000116663 CDS Human protein_coding chr1:11733893 chr1:11733894 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22002 0 0 0 0 0 Ribosome 0.438594040549288 0.438574614876627 0.2836428 0 hPsi_site_15726 iPseU_CNN:0.2836428;iRNA_PseU:0 15727 chr12 57485521 57485521 1 + G A UCEC 57485520 + 57485500 57485540 41 GCAGCAGGTGGGACTGGGGGTGGTCCAGACCGACTGGAGCC GCAGCAGGTGGGACTGGGGGTAGTCCAGACCGACTGGAGCC < 41bp 0.543152161065163 0.893288480923194 0.24251384 0.8480119 prediction 0.700272639716062 Functional Gain - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485520 chr12:57485521 nonsynonymous SNV 0.377 0 22 hPsi_associated_SNPs_22003 0 0 1 0 0 Cytosol 0.438716412702581 0.438718592995101 0.6960238 0 hPsi_site_15727 iPseU_CNN:0.6960238;iRNA_PseU:0 15728 chr16 70575707 70575707 1 + G A HNSC 70575706 + 70575686 70575726 41 CCTTGTGCTGGTTGATGAGTTGGACAGCCTCTCTCCCATTC CCTTGTGCTGGTTGATGAGTTAGACAGCCTCTCTCCCATTC < 41bp 0.458433648686152 0.85013576668861 0.2881836 0.60342467 prediction 0.70027153337722 Functional Gain - SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70575706 chr16:70575707 synonymous SNV . 0 22 hPsi_associated_SNPs_22004 0 0 1 0 1 Cytosol 0.438482177366932 0.438687264701105 0.20684934 0 hPsi_site_15728 iPseU_CNN:0.20684934;iRNA_PseU:0 15729 chr5 139494643 139494643 1 + G A BLCA 139494642 + 139494622 139494662 41 AGGGAGAAGCGGGCTGCCTGTGAGCAGCTTCACCAGCAGCA AGGGAGAAGCGGGCTGCCTGTAAGCAGCTTCACCAGCAGCA < 41bp 0.522527369458256 0.872662058284482 0.2328105 0.5336757 prediction 0.700269377652453 Functional Gain - PURA ENSG00000185129 CDS Human protein_coding chr5:139494642 chr5:139494643 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22005 0 0 1 0 0 Ribosome 0.438718569494467 0.438714480301666 0.0673514 0 hPsi_site_15729 iPseU_CNN:0.0673514;iRNA_PseU:0 15730 chr15 41862857 41862857 1 + C A LUAD 41862856 + 41862836 41862876 41 AAAACTGGAGGATGTGCTCATCCCAGAGCAGCAGTTCACCC AAAACTGGAGGATGTGCTCATACCAGAGCAGCAGTTCACCC < 41bp 0.509215837954639 0.859345798270017 0.35552365 0.7157824 prediction 0.700259920630756 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41862856 chr15:41862857 synonymous SNV . 0 22 hPsi_associated_SNPs_22006 0 0 0 0 2 Ribosome 0.438734728612443 0.438750662175869 0.4315648 0 hPsi_site_15730 iPseU_CNN:0.4315648;iRNA_PseU:0 15731 chr19 55176286 55176286 1 + C A LUSC 55176285 + 55176265 55176305 41 CCAGGCCCTCACCCACAAGGTCCGTCTCAACAGCTGGTGAG CCAGGCCCTCACCCACAAGGTACGTCTCAACAGCTGGTGAG < 41bp 0.493138898294415 0.85012020139553 0.37677047 0.93689656 prediction 0.700240402791059 Functional Gain - LILRB4 ENSG00000186818 CDS Human protein_coding chr19:55176285 chr19:55176286 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22007 0 0 0 0 2 exosome 0.438718592785294 0.438718591702211 0.87379312 0 hPsi_site_15731 iPseU_CNN:0.87379312;iRNA_PseU:0 15732 chr11 55889992 55889992 1 + G A LUSC 55889991 + 55889971 55890011 41 GGGGAATGTGGGGATGCTATTGATAATCCGCCTGGACCTCC GGGGAATGTGGGGATGCTATTAATAATCCGCCTGGACCTCC < 41bp 0.48375429222181 0.850113786793875 0.2755149 0.40700698 prediction 0.70022757358775 Functional Gain - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55889991 chr11:55889992 synonymous SNV . 0 22 hPsi_associated_SNPs_22008 0 0 0 0 0 unknown 0.438718592964405 0.438718593132878 0 0 hPsi_site_15732 iPseU_CNN:0;iRNA_PseU:0 15733 chr17 20805667 20805667 1 + G A UCEC 20805666 + 20805646 20805686 41 GTCTCCCATGTAGGAAAACGTGTCTCTGCTAACTGGAGGCG GTCTCCCATGTAGGAAAACGTATCTCTGCTAACTGGAGGCG < 41bp 0.488657323923771 0.850113784878764 0.37183356 0.56248206 prediction 0.700227569757528 Functional Gain - CCDC144NL-AS1 ENSG00000233098;ENSG00000265790 ncRNA_exonic Human other chr17:20805666 chr17:20805667 . . 0 22 hPsi_associated_SNPs_22009 0 0 0 0 0 unknown 0.438718593120342 0.438718608799413 0.12496412 0 hPsi_site_15733 iPseU_CNN:0.12496412;iRNA_PseU:0 15734 chr5 140516636 140516636 1 + G A BLCA 140516635 + 140516615 140516655 41 AGACCGCGGCTCCCCGGCGCTGAGCAGCGAGGCGCTGGTGC AGACCGCGGCTCCCCGGCGCTAAGCAGCGAGGCGCTGGTGC < 41bp 0.462466565302773 0.850112980415631 0.26119077 0.35244876 prediction 0.700225960831262 Functional Gain - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140516635 chr5:140516636 synonymous SNV . 0 22 hPsi_associated_SNPs_22010 0 0 0 0 0 Endoplasmic reticulum 0.438703993385993 0.439191794261458 0 0 hPsi_site_15734 iPseU_CNN:0;iRNA_PseU:0 15735 chr11 55606668 55606668 1 + G A HNSC 55606667 + 55606647 55606687 41 GAAACTCTGTGCCATGCTGGTGGTTGTATTGTATGCATGGG GAAACTCTGTGCCATGCTGGTAGTTGTATTGTATGCATGGG < 41bp 0.476556489569949 0.850111150294402 0.22071332 0.36798066 prediction 0.700222300588804 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606667 chr11:55606668 synonymous SNV . 0 22 hPsi_associated_SNPs_22011 0 0 0 0 0 unknown 0.438718599030925 0.438721265026169 0 0 hPsi_site_15735 iPseU_CNN:0;iRNA_PseU:0 15736 chr17 48541599 48541599 1 + G A LUSC 48541598 + 48541578 48541618 41 GGTGTCATTGCTGGGTCCCCTGCACCTCCAGAGTTGATCCG GGTGTCATTGCTGGGTCCCCTACACCTCCAGAGTTGATCCG < 41bp 0.542324812509934 0.89242400102476 0.31380427 0.42398137 prediction 0.700198377029652 Functional Gain - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48541598 chr17:48541599 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_22012 0 0 1 0 2 Endoplasmic reticulum 0.43675882362826 0.458858451188382 0 0 hPsi_site_15736 iPseU_CNN:0;iRNA_PseU:0 15737 chr4 1377709 1377709 1 + G A OV 1377708 + 1377688 1377728 41 GATACCGCCCGCGCTCGCATTGGGAGAAAAGTCTTCGCCAA GATACCGCCCGCGCTCGCATTAGGAGAAAAGTCTTCGCCAA < 41bp 0.462770740189582 0.850096209928056 0.40178066 0.6748805 prediction 0.700192419856112 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1377708 chr4:1377709 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_22013 0 0 1 0 1 Nucleus 0.438718593203092 0.438718593291923 0.349761 0 hPsi_site_15737 iPseU_CNN:0.349761;iRNA_PseU:0 15738 chr5 138221925 138221925 1 + G A PAAD 138221924 + 138221904 138221944 41 GGACGTAAAGAAAGAAGTGATGCACTCAATTCTGCAATAGA GGACGTAAAGAAAGAAGTGATACACTCAATTCTGCAATAGA < 41bp 0.454525985900613 0.850085123618629 0.33322847 0.71646523 prediction 0.700170247237258 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138221924 chr5:138221925 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22014 0 0 1 0 2 Nucleus 0.438718594561443 0.438718595990414 0.43293046 0 hPsi_site_15738 iPseU_CNN:0.43293046;iRNA_PseU:0 15739 chr1 46033762 46033762 1 + G A rs146714966 46033761 + 46033741 46033781 41 GGCACTGGTGGCTAAGGGGCTGGTGCAGGCGCTGGGCCTGT GGCACTGGTGGCTAAGGGGCTAGTGCAGGCGCTGGGCCTGT < 41bp 0.446421549436104 0.850064912614907 0.28366363 0.8009053 prediction 0.700129825229814 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033761 chr1:46033762 synonymous SNV . 0 22 hPsi_associated_SNPs_22015 0 0 1 0 1 Ribosome 0.438718643365351 0.438718592995102 0.6018106 0 hPsi_site_15739 iPseU_CNN:0.6018106;iRNA_PseU:0 15740 chr12 283836 283836 1 + G A BLCA 283835 + 283815 283855 41 GGCCGAGAGGGGAGCGCCGGTGCCGCCGCCAGACCTGCAGC GGCCGAGAGGGGAGCGCCGGTACCGCCGCCAGACCTGCAGC < 41bp 0.463312828074314 0.850044406101869 0.28199062 0.7984104 prediction 0.700088812203738 Functional Gain - IQSEC3 ENSG00000120645 CDS Human protein_coding chr12:283835 chr12:283836 synonymous SNV . 0 22 hPsi_associated_SNPs_22016 0 0 0 0 1 nucleolus 0.438719211838469 0.438844678701162 0.5968208 0 hPsi_site_15740 iPseU_CNN:0.5968208;iRNA_PseU:0 15741 chr17 38318312 38318312 1 + G A CESC 38318311 + 38318291 38318331 41 AAGGGCCCTAAGCATTTGGATGATGATGAAGATCGGAAGAA AAGGGCCCTAAGCATTTGGATAATGATGAAGATCGGAAGAA < 41bp 0.45033812420255 0.85003256468113 0.29568952 0.8343052 prediction 0.70006512936226 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318311 chr17:38318312 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22017 0 0 1 0 2 Ribosome 0.43871868049346 0.438706729851835 0.6686104 0 hPsi_site_15741 iPseU_CNN:0.6686104;iRNA_PseU:0 15742 chr11 55339987 55339987 1 + G A rs139050712 55339986 + 55339966 55340006 41 TGTGGACATCTGTAAGCCCCTGCACTACATGACCATCATAA TGTGGACATCTGTAAGCCCCTACACTACATGACCATCATAA < 41bp 0.478829101513872 0.850015569645371 0.33259302 0.6689072 prediction 0.700031139290741 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55339986 chr11:55339987 synonymous SNV . 0 22 hPsi_associated_SNPs_22018 0 0 0 0 0 unknown 0.438717008372557 0.438718886042731 0.3378144 0 hPsi_site_15742 iPseU_CNN:0.3378144;iRNA_PseU:0 15743 chr15 79586865 79586865 1 + G A rs55824566 79586864 + 79586844 79586884 41 GAAGCTCAACAGCTCTCACTTGTCTCTTTTCCATGGCTCTC GAAGCTCAACAGCTCTCACTTATCTCTTTTCCATGGCTCTC < 41bp 0.532685119695732 0.882691497347833 0.3132398 0.43063208 prediction 0.700012755304201 Functional Gain - ANKRD34C ENSG00000235711 CDS Human protein_coding chr15:79586864 chr15:79586865 synonymous SNV . 0 22 hPsi_associated_SNPs_22019 0 0 0 0 0 unknown 0.438783006372521 0.439089350007604 0 0 hPsi_site_15743 iPseU_CNN:0;iRNA_PseU:0 15744 chr3 148857986 148857986 1 + G A UCEC 148857985 + 148857965 148858005 41 CGCTTTCGGAGGCCCCCTTGTGCATTTCCTGTTGCCCTGTG CGCTTTCGGAGGCCCCCTTGTACATTTCCTGTTGCCCTGTG < 41bp 0.450989022426794 0.850003742249599 0.37312973 0.7978859 prediction 0.700007484499198 Functional Gain - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148857985 chr3:148857986 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_22020 0 0 1 0 0 Ribosome 0.4387189868459 0.438718592717029 0.5957718 0 hPsi_site_15744 iPseU_CNN:0.5957718;iRNA_PseU:0 15745 chr19 39214690 39214690 1 + C A UCEC 39214689 + 39214669 39214709 41 GGAGGACCTCCAGGACATGTTCATCGTCCATACCATCGAGG GGAGGACCTCCAGGACATGTTAATCGTCCATACCATCGAGG < 41bp 0.499627925997454 0.849999378989265 0.25725743 0.8401774 prediction 0.699998757978531 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39214689 chr19:39214690 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22021 0 0 1 0 1 Nucleus 0.438195353625985 0.437725757937281 0.6803548 0 hPsi_site_15745 iPseU_CNN:0.6803548;iRNA_PseU:0 15746 chrX 140926178 140926178 1 + G A LUSC 140926177 + 140926157 140926197 41 GCCAGTGGGTGAAAAACACATGTGCCACATATGCCTTATCC GCCAGTGGGTGAAAAACACATATGCCACATATGCCTTATCC < 41bp 0.482129952217162 0.849995505803607 0.5632597 0.7789092 prediction 0.699991011607215 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140926177 chrX:140926178 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_22022 0 0 0 0 1 exosome 0.438484899367743 0.43868238672279 0.431299 0 hPsi_site_15746 iPseU_CNN:0.431299;iRNA_PseU:0 15747 chr2 187368763 187368763 1 + G A GBM 187368762 + 187368742 187368782 41 TAATATTGTCTCTATAGGTGTGCAAGCATTTCCTGGAAGCT TAATATTGTCTCTATAGGTGTACAAGCATTTCCTGGAAGCT < 41bp 0.525852725339877 0.875826685607135 0.2631793 0.42194185 prediction 0.699947920534517 Functional Gain - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187368762 chr2:187368763 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22023 0 0 1 0 1 Ribosome 0.438707374117142 0.438718278497642 0 0 hPsi_site_15747 iPseU_CNN:0;iRNA_PseU:0 15748 chr10 15014541 15014541 1 + G A BLCA 15014540 + 15014520 15014560 41 TTGGCCGGAGACAGGATATGTGAAGAAACTTCAGAGAAGGG TTGGCCGGAGACAGGATATGTAAAGAAACTTCAGAGAAGGG < 41bp 0.475676899354056 0.849972602148292 0.31416857 0.46898997 prediction 0.699945204296584 Functional Gain - MEIG1 ENSG00000197889 CDS Human protein_coding chr10:15014540 chr10:15014541 synonymous SNV . 0 22 hPsi_associated_SNPs_22024 0 0 0 0 1 exosome 0.438718990603804 0.438718592994897 0 0 hPsi_site_15748 iPseU_CNN:0;iRNA_PseU:0 15749 chr17 56247306 56247306 1 + G A rs80043692 56247305 + 56247285 56247325 41 AAACCATCTCTTACCAGGGCTGCATGGGTCAGATCTTCTTC AAACCATCTCTTACCAGGGCTACATGGGTCAGATCTTCTTC < 41bp 0.475008060281348 0.849961546034453 0.21359158 0.4674949 prediction 0.699923092068906 Functional Gain - OR4D2 ENSG00000255713 CDS Human protein_coding chr17:56247305 chr17:56247306 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22025 0 0 0 0 0 unknown 0.437117584079961 0.438670025162979 0 0 hPsi_site_15749 iPseU_CNN:0;iRNA_PseU:0 15750 chr5 140559733 140559733 1 + G A UCEC 140559732 + 140559712 140559752 41 TTCGCTCTTCCTCTTCTCGGTGCTCCTGTTCGTGGCGGTGC TTCGCTCTTCCTCTTCTCGGTACTCCTGTTCGTGGCGGTGC < 41bp 0.480797047650111 0.849958909237467 0.29887515 0.873669 prediction 0.699917818474934 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140559732 chr5:140559733 synonymous SNV . 0 22 hPsi_associated_SNPs_22026 0 0 0 0 0 exosome 0.438577702366606 0.438707671905465 0.747338 0 hPsi_site_15750 iPseU_CNN:0.747338;iRNA_PseU:0 15751 chr19 11348774 11348774 1 + G A LUSC 11348773 + 11348753 11348793 41 GCGGGTAAATTCACTGCAGCTGGACTTGCCAAAGATGACCT GCGGGTAAATTCACTGCAGCTAGACTTGCCAAAGATGACCT < 41bp 0.473513376137264 0.849928247880657 0.16177881 0.22214705 prediction 0.699856495761314 Functional Gain - DOCK6 ENSG00000130158 CDS Human protein_coding chr19:11348773 chr19:11348774 synonymous SNV . 0 22 hPsi_associated_SNPs_22027 0 0 0 0 1 Cytosol 0.436252930816844 0.439478856178289 0 0 hPsi_site_15751 iPseU_CNN:0;iRNA_PseU:0 15752 chr1 202273729 202273729 1 + G A rs151061371 202273728 + 202273708 202273748 41 CCGGCTGCTCCCATCGGGGATGTGCCAACAGCTGCCCAGGC CCGGCTGCTCCCATCGGGGATATGCCAACAGCTGCCCAGGC < 41bp 0.439850929475868 0.849925884621421 0.6399301 0.77932376 prediction 0.699851769242841 Functional Gain - LGR6 ENSG00000133067 CDS Human protein_coding chr1:202273728 chr1:202273729 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_22028 0 0 0 2 2 nucleoplasm 0.438692310202703 0.438715890678363 0.27878732 0 hPsi_site_15752 iPseU_CNN:0.27878732;iRNA_PseU:0 15753 chr11 73957221 73957221 1 + G A UCEC 73957220 + 73957200 73957240 41 TATCCAATCTCTTTCTTAGTTGTCCCATTCCTAAATTGCTG TATCCAATCTCTTTCTTAGTTATCCCATTCCTAAATTGCTG < 41bp 0.526806941670493 0.876731743709344 0.217942 0.3140542 prediction 0.699849604077702 Functional Gain - PPME1 ENSG00000214517 CDS Human protein_coding chr11:73957220 chr11:73957221 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22029 0 0 1 0 1 Ribosome 0.438724898560374 0.438716433202517 0 0 hPsi_site_15753 iPseU_CNN:0;iRNA_PseU:0 15754 chr8 22426774 22426774 1 + G A rs142270542 22426773 + 22426753 22426793 41 GGGGGACCTGGAGGTGGAGCTGTCCTTCCGCAAGGTGGGCC GGGGGACCTGGAGGTGGAGCTATCCTTCCGCAAGGTGGGCC < 41bp 0.453471972332707 0.849923739239913 0.30842668 0.6399001 prediction 0.699847478479826 Functional Gain - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22426773 chr8:22426774 synonymous SNV . 0 22 hPsi_associated_SNPs_22030 0 0 1 0 1 Cytosol 0.438718593096359 0.438718594186939 0.2798002 0 hPsi_site_15754 iPseU_CNN:0.2798002;iRNA_PseU:0 15755 chr7 129962394 129962394 1 + G A BLCA 129962393 + 129962373 129962413 41 ATCAAATTTGCATTCACATTTGAGTTGAGAGATACCGGGAC ATCAAATTTGCATTCACATTTAAGTTGAGAGATACCGGGAC < 41bp 0.531271556686088 0.881193620789614 0.4546297 0.59543395 prediction 0.699844128207052 Functional Gain - CPA4 ENSG00000128510 CDS Human protein_coding chr7:129962393 chr7:129962394 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_22031 0 0 0 0 1 Endoplasmic reticulum 0.438721179773467 0.438719809147667 0.1908679 0 hPsi_site_15755 iPseU_CNN:0.1908679;iRNA_PseU:0 15756 chr1 154987599 154987599 1 + G A OV 154987598 + 154987578 154987618 41 GCTCCCAGCCCGGACGAGGATGACTGTGAGCGAGCCCGCCA GCTCCCAGCCCGGACGAGGATAACTGTGAGCGAGCCCGCCA < 41bp 0.54042580030209 0.890342255693269 0.23327339 0.42004865 prediction 0.699832910782357 Functional Gain - ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154987598 chr1:154987599 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_22032 0 0 1 0 0 chromatin 0.438563272519714 0.438729340754428 0 0 hPsi_site_15756 iPseU_CNN:0;iRNA_PseU:0 15757 chr9 116346503 116346503 1 + G A UCEC 116346502 + 116346482 116346522 41 ACTGCGTGTGCAGAACTCGCTGCGGCGCCGGACGCACAGCG ACTGCGTGTGCAGAACTCGCTACGGCGCCGGACGCACAGCG < 41bp 0.503820841924533 0.853728749182939 0.374048 0.7187572 prediction 0.699815814516811 Functional Gain - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116346502 chr9:116346503 synonymous SNV . 0 22 hPsi_associated_SNPs_22033 0 0 0 0 0 Nucleus 0.438746384178524 0.438638508670875 0.4375144 0 hPsi_site_15757 iPseU_CNN:0.4375144;iRNA_PseU:0 15758 chrX 72667266 72667266 1 + G A LUSC 72667265 + 72667245 72667285 41 CTATATGGGGTATCCTCATATGCCCAGCATGGATCCTCACT CTATATGGGGTATCCTCATATACCCAGCATGGATCCTCACT < 41bp 0.465448853168373 0.849896848302814 0.39983612 0.7574237 prediction 0.699793696605628 Functional Gain - CDX4 ENSG00000131264 CDS Human protein_coding chrX:72667265 chrX:72667266 nonsynonymous SNV 0.683 0 22 hPsi_associated_SNPs_22034 0 0 0 0 0 exosome 0.438718646303369 0.438718674708321 0.5148474 0 hPsi_site_15758 iPseU_CNN:0.5148474;iRNA_PseU:0 15759 chr5 140603239 140603239 1 + G A UCEC 140603238 + 140603218 140603258 41 TCTAGCGAGGGACCTAGGGCTGGGGGTGGAGGAGCTGTCTT TCTAGCGAGGGACCTAGGGCTAGGGGTGGAGGAGCTGTCTT < 41bp 0.473811569119148 0.849893212691826 0.28574097 0.38166052 prediction 0.699786425383653 Functional Gain - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140603238 chr5:140603239 synonymous SNV . 0 22 hPsi_associated_SNPs_22035 0 0 0 0 0 exosome 0.438718592992532 0.438718594015974 0 0 hPsi_site_15759 iPseU_CNN:0;iRNA_PseU:0 15760 chr8 18257889 18257889 1 + G A SKCM 18257888 + 18257868 18257908 41 TACATTGTCGATGCTGGGTCTGGAAGCTCCTCCCAGATGTG TACATTGTCGATGCTGGGTCTAGAAGCTCCTCCCAGATGTG < 41bp 0.462945841204295 0.849883906474658 0.23061845 0.3476559 prediction 0.699767812949316 Functional Gain - NAT2 ENSG00000156006 CDS Human protein_coding chr8:18257888 chr8:18257889 nonsynonymous SNV 0.406 4 22 hPsi_associated_SNPs_22036 0 0 0 0 0 exosome 0.438719988926529 0.438826009527933 0 0 hPsi_site_15760 iPseU_CNN:0;iRNA_PseU:0 15761 chr12 7177347 7177347 1 + G A LIHC 7177346 + 7177326 7177366 41 AACAGGGAGCCAACAATGTATGTTGGGTCCACCTCAGTGCA AACAGGGAGCCAACAATGTATATTGGGTCCACCTCAGTGCA < 41bp 0.536870173501117 0.886743554451281 0.73372954 0.78376615 prediction 0.699746761900328 Functional Gain - C1S ENSG00000182326 CDS Human protein_coding chr12:7177346 chr12:7177347 nonsynonymous SNV 0.012 1 22 hPsi_associated_SNPs_22037 0 0 0 0 0 Nucleus 0.438717425074472 0.438707405887571 0.10007322 0 hPsi_site_15761 iPseU_CNN:0.10007322;iRNA_PseU:0 15762 chr19 49967396 49967396 1 + G A rs150960356 49967395 + 49967375 49967415 41 CCCTTGCAGGTGCCGTGGCCTGTGGTCGTGGCCTCCCCCTT CCCTTGCAGGTGCCGTGGCCTATGGTCGTGGCCTCCCCCTT < 41bp 0.454200588401018 0.849869133027106 0.39446983 0.5949264 prediction 0.699738266054212 Functional Gain - ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967395 chr19:49967396 nonsynonymous SNV 0.964 2 22 hPsi_associated_SNPs_22038 0 0 1 0 1 Ribosome 0.438413129541722 0.440398090771154 0.1898528 0 hPsi_site_15762 iPseU_CNN:0.1898528;iRNA_PseU:0 15763 chr5 154396321 154396321 1 + G A SKCM 154396320 + 154396300 154396340 41 AGCACACTGCAGTGTCAGGATGAAGAACTTGAGAAGATGCG AGCACACTGCAGTGTCAGGATAAAGAACTTGAGAAGATGCG < 41bp 0.478368798317372 0.849866154571232 0.2946234 0.4695859 prediction 0.699732309142464 Functional Gain - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154396320 chr5:154396321 nonsynonymous SNV 0.924 0 22 hPsi_associated_SNPs_22039 0 0 0 0 0 exosome 0.438958465000748 0.438720223333242 0 0 hPsi_site_15763 iPseU_CNN:0;iRNA_PseU:0 15764 chr5 113831771 113831771 1 + G A SKCM 113831770 + 113831750 113831790 41 AGATTTCATTGAGGCTCAGATGGAGAGCTACGACAAGCACG AGATTTCATTGAGGCTCAGATAGAGAGCTACGACAAGCACG < 41bp 0.461963360668174 0.849862586507605 0.20839572 0.2850097 prediction 0.699725173015209 Functional Gain - KCNN2 ENSG00000080709 CDS Human protein_coding chr5:113831770 chr5:113831771 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_22040 0 0 0 0 0 Cytosol 0.438718593899044 0.438451438352926 0 0 hPsi_site_15764 iPseU_CNN:0;iRNA_PseU:0 15765 chr3 158408038 158408038 1 + G A UCEC 158408037 + 158408017 158408057 41 GAATTTCAGGGACAAGTAATTGCAGGAATTAACCGACGCCA GAATTTCAGGGACAAGTAATTACAGGAATTAACCGACGCCA < 41bp 0.513315106320714 0.863176185807532 0.27596062 0.46364784 prediction 0.699722158973635 Functional Gain - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158408037 chr3:158408038 nonsynonymous SNV 0.700 0 22 hPsi_associated_SNPs_22041 0 0 1 0 2 Nucleus 0.438590917785393 0.438720239261355 0 0 hPsi_site_15765 iPseU_CNN:0;iRNA_PseU:0 15766 chr17 39977282 39977282 1 + G A CESC 39977281 + 39977261 39977301 41 ACACGGGCCTGCAGGGCATGTGTGTGGGAGAGAGGCGGCAG ACACGGGCCTGCAGGGCATGTATGTGGGAGAGAGGCGGCAG < 41bp 0.45095990998111 0.84985928147528 0.3718018 0.58176035 prediction 0.699718562950561 Functional Gain - FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39977281 chr17:39977282 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22042 0 0 1 0 2 Nucleus 0.438687693360877 0.43868775935572 0.1635207 0 hPsi_site_15766 iPseU_CNN:0.1635207;iRNA_PseU:0 15767 chr11 7672925 7672925 1 + G A PRAD 7672924 + 7672904 7672944 41 CACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCAC CACTGGGGACACCCTGGCTATACTTCTCAACATCCCCCCAC < 41bp 0.443131760273603 0.849849994136228 0.251728 0.67991567 prediction 0.699699988272456 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7672924 chr11:7672925 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22043 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592994889 0.35983134 0 hPsi_site_15767 iPseU_CNN:0.35983134;iRNA_PseU:0 15768 chr4 1388513 1388513 1 + G A STAD 1388512 + 1388492 1388532 41 CCTGCTCACACACGTGTCCATGTGGAGTGCCCACCTGCTCA CCTGCTCACACACGTGTCCATATGGAGTGCCCACCTGCTCA < 41bp 0.492594980029609 0.849846447735957 0.257871 0.32987285 prediction 0.699692895471913 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388512 chr4:1388513 nonsynonymous SNV 0.012 1 22 hPsi_associated_SNPs_22044 0 0 0 0 0 chromatin 0.438832966658033 0.438725486554669 0 0 hPsi_site_15768 iPseU_CNN:0;iRNA_PseU:0 15769 chr13 31309770 31309770 1 + G A LGG 31309769 + 31309749 31309789 41 CAAGAAACTGTAGGCAATGTTGTCCTGTTGGCCATCGTCAC CAAGAAACTGTAGGCAATGTTATCCTGTTGGCCATCGTCAC < 41bp 0.544178880824026 0.894015012527999 0.4194231 0.43714988 prediction 0.699672263407945 Functional Gain - ALOX5AP ENSG00000132965 CDS Human protein_coding chr13:31309769 chr13:31309770 nonsynonymous SNV 0.256 2 22 hPsi_associated_SNPs_22045 0 0 0 0 2 exosome 0.438719297136479 0.438718675254609 0 0 hPsi_site_15769 iPseU_CNN:0;iRNA_PseU:0 15770 chr19 31039248 31039248 1 + G A UCEC 31039247 + 31039227 31039267 41 GGAAGAGCTTATCAAAGCATTGTGAGCAACGGTGTGAATTT GGAAGAGCTTATCAAAGCATTATGAGCAACGGTGTGAATTT < 41bp 0.458208248869782 0.849824064483001 0.358092 0.3350675 prediction 0.699648128966001 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31039247 chr19:31039248 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_22046 0 0 0 0 0 exosome 0.438566154594767 0.437959222089328 0 0 hPsi_site_15770 iPseU_CNN:0;iRNA_PseU:0 15771 chr5 140581488 140581488 1 + G A UCEC 140581487 + 140581467 140581507 41 TGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGGGCGGCC TGTTCGTGGCGGTGCGGCTGTACAGGAGGAGCAGGGCGGCC < 41bp 0.530100535122418 0.879920826164492 0.44270563 0.89222515 prediction 0.699640582084148 Functional Gain - PCDHB11 ENSG00000197479 CDS Human protein_coding chr5:140581487 chr5:140581488 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_22047 0 0 0 0 0 Nucleus 0.438718459925781 0.438718579528273 0.7844503 0 hPsi_site_15771 iPseU_CNN:0.7844503;iRNA_PseU:0 15772 chr16 70363314 70363314 1 + G A CESC 70363313 + 70363293 70363333 41 ATCAAGGTGTTTGTTCTGGATGAGGCTGATGTCATGATAGC ATCAAGGTGTTTGTTCTGGATAAGGCTGATGTCATGATAGC < 41bp 0.535667093187965 0.8854862094339 0.21947628 0.429716 prediction 0.699638232491868 Functional Gain - DDX19B ENSG00000157349 CDS Human protein_coding chr16:70363313 chr16:70363314 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_22048 0 0 0 0 1 chromatin 0.438756870362565 0.438743147173338 0 0 hPsi_site_15772 iPseU_CNN:0;iRNA_PseU:0 15773 chr11 44105042 44105042 1 + G A COAD 44105041 + 44105021 44105061 41 CTTTTTGGACAACAAGGTGCTGCTGTCCTTTGGCAAGGCCT CTTTTTGGACAACAAGGTGCTACTGTCCTTTGGCAAGGCCT < 41bp 0.473908492725889 0.849818298870115 0.32189566 0.6959426 prediction 0.699636597740231 Functional Gain - ACCS ENSG00000110455 CDS Human protein_coding chr11:44105041 chr11:44105042 synonymous SNV . 0 22 hPsi_associated_SNPs_22049 0 0 0 0 2 chromatin 0.438716824265852 0.438713712703953 0.3918852 0 hPsi_site_15773 iPseU_CNN:0.3918852;iRNA_PseU:0 15774 chr13 25280515 25280515 1 + G A SKCM 25280514 + 25280494 25280534 41 ATGAGCTCAGAACAGCTGGATGAGATCTTAGCCAACTACCA ATGAGCTCAGAACAGCTGGATAAGATCTTAGCCAACTACCA < 41bp 0.543902227400673 0.893716345092218 0.6467781 0.8976025 prediction 0.69962823538309 Functional Gain - ATP12A ENSG00000075673 CDS Human protein_coding chr13:25280514 chr13:25280515 nonsynonymous SNV 0.676 3 22 hPsi_associated_SNPs_22050 0 0 0 0 2 Nucleus 0.438711899863904 0.438719412948482 0.5016488 0 hPsi_site_15774 iPseU_CNN:0.5016488;iRNA_PseU:0 15775 chr2 96993185 96993185 1 + G A UCEC 96993184 + 96993164 96993204 41 GCTGGTGGAGTCAGAATGTGTGTGCAAGCGTGAGAAACTCC GCTGGTGGAGTCAGAATGTGTATGCAAGCGTGAGAAACTCC < 41bp 0.458287312062981 0.849808453459506 0.31776506 0.38950145 prediction 0.699616906919012 Functional Gain - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96993184 chr2:96993185 synonymous SNV . 0 22 hPsi_associated_SNPs_22051 0 0 1 0 0 Endoplasmic reticulum 0.438031225917649 0.436608373468525 0 0 hPsi_site_15775 iPseU_CNN:0;iRNA_PseU:0 15776 chr1 150528696 150528696 1 + G A COAD 150528695 + 150528675 150528715 41 GTCCTGATGGCTGTGGAGTCTGTGGGGGTGATGATTCTACC GTCCTGATGGCTGTGGAGTCTATGGGGGTGATGATTCTACC < 41bp 0.447357191535365 0.849808259793268 0.25858444 0.29731458 prediction 0.699616519586536 Functional Gain - ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150528695 chr1:150528696 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22052 0 0 1 0 1 Endoplasmic reticulum 0.438718594547231 0.438718501683625 0 0 hPsi_site_15776 iPseU_CNN:0;iRNA_PseU:0 15777 chr16 57609621 57609621 1 + G A rs118127254 57609620 + 57609600 57609640 41 AGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCCTGACAT AGGCACTGAGGGGAAGGCATTACTCTACCTCTCCCTGACAT < 41bp 0.479035741629415 0.849807785007751 0.4783133 0.802493 prediction 0.699615570015502 Functional Gain - ADGRG5 ENSG00000159618 UTR3 Human protein_coding chr16:57609620 chr16:57609621 . . 0 22 hPsi_associated_SNPs_22053 0 0 0 9 0 Ribosome 0.437679355237501 0.438358159951195 0.604986 0 hPsi_site_15777 iPseU_CNN:0.604986;iRNA_PseU:0 15778 chr12 7356091 7356091 1 + G A CESC 7356090 + 7356070 7356110 41 GAGATGGCAAAACGGGATGCTGAGGCCCACCCCTGGCTTTC GAGATGGCAAAACGGGATGCTAAGGCCCACCCCTGGCTTTC < 41bp 0.550033170786226 0.899837003997476 0.24130043 0.3181265 prediction 0.6996076664225 Functional Gain - PEX5 ENSG00000139197 CDS Human protein_coding chr12:7356090 chr12:7356091 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_22054 0 0 1 0 3 Ribosome 0.438718644214084 0.438718592997723 0 0 hPsi_site_15778 iPseU_CNN:0;iRNA_PseU:0 15779 chr14 58698870 58698870 1 + G A UCEC 58698869 + 58698849 58698889 41 GCCAGGATTTCTCCACAGATTGCTTGCAGAAATAAGGTATT GCCAGGATTTCTCCACAGATTACTTGCAGAAATAAGGTATT < 41bp 0.530391514287843 0.880194434780344 0.24302515 0.35043988 prediction 0.699605840985003 Functional Gain - ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58698869 chr14:58698870 synonymous SNV . 0 22 hPsi_associated_SNPs_22055 0 0 1 1 0 Ribosome 0.43244301912152 0.438707840269896 0 0 hPsi_site_15779 iPseU_CNN:0;iRNA_PseU:0 15780 chr17 72741156 72741156 1 + G A PRAD 72741155 + 72741135 72741175 41 TCTCCCGGGCAGGAGTACGGTGTTCCCTTCCTGGAGACCAG TCTCCCGGGCAGGAGTACGGTATTCCCTTCCTGGAGACCAG < 41bp 0.455501863306637 0.849799124534239 0.38854247 0.7046164 prediction 0.699598249068478 Functional Gain - RAB37 ENSG00000172794 CDS Human protein_coding chr17:72741155 chr17:72741156 nonsynonymous SNV 0.925 1 22 hPsi_associated_SNPs_22056 0 0 0 0 3 nucleus 0.438657129495787 0.438715927967864 0.4092328 0 hPsi_site_15780 iPseU_CNN:0.4092328;iRNA_PseU:0 15781 chr19 16977322 16977322 1 + G A LUSC 16977321 + 16977301 16977341 41 GCAGAACGACACCAAGGCCCTGCGCTCCAAGAGCTTGCTCA GCAGAACGACACCAAGGCCCTACGCTCCAAGAGCTTGCTCA < 41bp 0.439654031664694 0.849790235420974 0.2724688 0.42073464 prediction 0.699580470841948 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16977321 chr19:16977322 synonymous SNV . 0 22 hPsi_associated_SNPs_22057 0 0 1 0 1 Cytosol 0.439766231540057 0.437191972404994 0 0 hPsi_site_15781 iPseU_CNN:0;iRNA_PseU:0 15782 chr6 36870128 36870128 1 + G A GBM 36870127 + 36870107 36870147 41 CATCCATCACATTAGGCTGATGTCCTTGCCCATTGCCAAGA CATCCATCACATTAGGCTGATATCCTTGCCCATTGCCAAGA < 41bp 0.536449981420638 0.886237645065934 0.31688923 0.58564794 prediction 0.699575327290592 Functional Gain - C6orf89 ENSG00000198663 CDS Human protein_coding chr6:36870127 chr6:36870128 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22058 0 0 1 0 2 Endoplasmic reticulum 0.438718592995958 0.438718593006676 0.17129588 0 hPsi_site_15782 iPseU_CNN:0.17129588;iRNA_PseU:0 15783 chr11 65484387 65484387 1 + G A COAD 65484386 + 65484366 65484406 41 GAATCAACGGAAGACTACAATGTGGCCTGCATCCTAACCCT GAATCAACGGAAGACTACAATATGGCCTGCATCCTAACCCT < 41bp 0.538116774816601 0.887903851494965 0.3587575 0.50931424 prediction 0.699574153356729 Functional Gain - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65484386 chr11:65484387 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_22059 0 0 1 0 2 Cytosol 0.438794567067805 0.438745714031914 0.0186284800000001 0 hPsi_site_15783 iPseU_CNN:0.0186284800000001;iRNA_PseU:0 15784 chr19 16060291 16060291 1 + G A LUAD 16060290 + 16060270 16060310 41 TGGTGGCTCAGTCATGGGGATGATGGTGACAACGATAGTTT TGGTGGCTCAGTCATGGGGATAATGGTGACAACGATAGTTT < 41bp 0.480592232625467 0.849780208752622 0.29181632 0.7336034 prediction 0.699560417505245 Functional Gain - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060290 chr19:16060291 nonsynonymous SNV 0.865 0 22 hPsi_associated_SNPs_22060 0 0 0 0 0 unknown 0.438685385775966 0.439033166649094 0.4672068 0 hPsi_site_15784 iPseU_CNN:0.4672068;iRNA_PseU:0 15785 chr19 15052508 15052508 1 + G A UCEC 15052507 + 15052487 15052527 41 CTCTCCAACCTGTCCTTTGCTGACATCTGTTTCACATCCAC CTCTCCAACCTGTCCTTTGCTAACATCTGTTTCACATCCAC < 41bp 0.47591658507537 0.849776297427346 0.30737984 0.6199796 prediction 0.699552594854691 Functional Gain - OR7C2 ENSG00000127529 CDS Human protein_coding chr19:15052507 chr19:15052508 nonsynonymous SNV 0.205 3 22 hPsi_associated_SNPs_22061 0 0 0 0 0 exosome 0.43871886577567 0.438713197128015 0.2399592 0 hPsi_site_15785 iPseU_CNN:0.2399592;iRNA_PseU:0 15786 chr18 9522255 9522255 1 + G A BLCA 9522254 + 9522234 9522274 41 TAACACTGTAGCCAGTTTGCTGAAGCAGTATTTGCGAGACC TAACACTGTAGCCAGTTTGCTAAAGCAGTATTTGCGAGACC < 41bp 0.457460813412878 0.849740271578571 0.3627404 0.6443813 prediction 0.699480543157142 Functional Gain - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9522254 chr18:9522255 synonymous SNV . 0 22 hPsi_associated_SNPs_22062 0 0 1 0 1 Ribosome 0.43872265988275 0.438713203276695 0.2887626 0 hPsi_site_15786 iPseU_CNN:0.2887626;iRNA_PseU:0 15787 chr18 670694 670694 1 + C A OV 670693 + 670673 670713 41 TCCTCTGCTGGTTCCTCAGATCTTCCTCTGATGGCGCTGCC TCCTCTGCTGGTTCCTCAGATATTCCTCTGATGGCGCTGCC < 41bp 0.499531371488706 0.849740144205307 0.33314186 0.39315003 prediction 0.699480288410614 Functional Gain - TYMS ENSG00000176890 CDS Human protein_coding chr18:670693 chr18:670694 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_22063 0 0 1 0 1 Ribosome 0.438719513606671 0.438333994384077 0 0 hPsi_site_15787 iPseU_CNN:0;iRNA_PseU:0 15788 chr3 150176363 150176363 1 + G A CESC 150176362 + 150176342 150176382 41 CACTTCTCAACAGCAAGCAGTGATAGCACAGCCTCCGCAGC CACTTCTCAACAGCAAGCAGTAATAGCACAGCCTCCGCAGC < 41bp 0.459509312189811 0.849737227682775 0.20500737 0.3281631 prediction 0.69947445536555 Functional Gain - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150176362 chr3:150176363 synonymous SNV . 0 22 hPsi_associated_SNPs_22064 0 0 1 0 0 Ribosome 0.438956955014575 0.438977535392184 0 0 hPsi_site_15788 iPseU_CNN:0;iRNA_PseU:0 15789 chr3 111719717 111719717 1 + C A GBM 111719716 + 111719696 111719736 41 TTTTAAGCAGATGGAGCAAATCTCCCAGTTCCTAAAAGCTG TTTTAAGCAGATGGAGCAAATATCCCAGTTCCTAAAAGCTG < 41bp 0.501089032367125 0.850800870612673 0.14527369 0.2773069 prediction 0.699423676491095 Functional Gain - TAGLN3 ENSG00000144834 CDS Human protein_coding chr3:111719716 chr3:111719717 synonymous SNV . 0 22 hPsi_associated_SNPs_22065 0 0 1 0 2 Endoplasmic reticulum 0.438718377797383 0.438985810570815 0 0 hPsi_site_15789 iPseU_CNN:0;iRNA_PseU:0 15790 chr7 73477527 73477527 1 + G A LUSC 73477526 + 73477506 73477546 41 GGAGGGCTCGGGGCTCTCGGTGGAGTAGGCATCCCAGGCGG GGAGGGCTCGGGGCTCTCGGTAGAGTAGGCATCCCAGGCGG < 41bp 0.485812910751726 0.849702702720311 0.6070478 0.8987998 prediction 0.699405405440622 Functional Gain - ELN ENSG00000049540 CDS Human protein_coding chr7:73477526 chr7:73477527 nonsynonymous SNV 0.130 2 22 hPsi_associated_SNPs_22066 0 0 0 0 2 exosome 0.438718572099512 0.438691832892455 0.583504 0 hPsi_site_15790 iPseU_CNN:0.583504;iRNA_PseU:0 15791 chr12 57485608 57485608 1 + G A SKCM 57485607 + 57485587 57485627 41 AGCTTCCCAAGGGGGGATGCTGGGGAGGTCACATCCCTGCT AGCTTCCCAAGGGGGGATGCTAGGGAGGTCACATCCCTGCT < 41bp 0.449345491859933 0.849694100321701 0.19891515 0.28299594 prediction 0.699388200643402 Functional Gain - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485607 chr12:57485608 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_22067 0 0 1 0 0 Cytosol 0.438718575707736 0.438718496116817 0 0 hPsi_site_15791 iPseU_CNN:0;iRNA_PseU:0 15792 chr22 32754246 32754246 1 + G A LGG 32754245 + 32754225 32754265 41 GATGCACCGTCTGCCTCAAGTGCATCAATTCGCTGCAGAAG GATGCACCGTCTGCCTCAAGTACATCAATTCGCTGCAGAAG < 41bp 0.457948302373677 0.849690065477195 0.34560248 0.3896785 prediction 0.69938013095439 Functional Gain - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32754245 chr22:32754246 nonsynonymous SNV 0.020 3 22 hPsi_associated_SNPs_22068 0 0 0 0 0 exosome 0.438724997628825 0.438496558205581 0 0 hPsi_site_15792 iPseU_CNN:0;iRNA_PseU:0 15793 chr19 35793563 35793563 1 + G A COAD 35793562 + 35793542 35793582 41 GGAGAGTACTGGTGTGTGGCTGAGAACCAGTATGGCCAGAG GGAGAGTACTGGTGTGTGGCTAAGAACCAGTATGGCCAGAG < 41bp 0.53903316968476 0.888708605145833 0.28232992 0.7557372 prediction 0.699350870922146 Functional Gain - MAG ENSG00000105695 CDS Human protein_coding chr19:35793562 chr19:35793563 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_22069 0 0 0 0 0 Endoplasmic reticulum 0.438718595126377 0.438713937608991 0.5114744 0 hPsi_site_15793 iPseU_CNN:0.5114744;iRNA_PseU:0 15794 chr7 23183496 23183496 1 + G A CESC 23183495 + 23183475 23183515 41 TGATGCTGCAGTCAGGTGGTTGAAATACGATGAACCTAATC TGATGCTGCAGTCAGGTGGTTAAAATACGATGAACCTAATC < 41bp 0.535555338726472 0.885225029740479 0.33345178 0.6453834 prediction 0.699339382028015 Functional Gain - KLHL7 ENSG00000122550 CDS Human protein_coding chr7:23183495 chr7:23183496 synonymous SNV . 0 22 hPsi_associated_SNPs_22070 0 0 1 0 1 cytosol 0.438700242727554 0.438718646486319 0.2907668 0 hPsi_site_15794 iPseU_CNN:0.2907668;iRNA_PseU:0 15795 chr6 26468438 26468438 1 + G A COAD 26468437 + 26468417 26468457 41 GAGGAAAGGGGAGGTCCTGCTGATTCCTCAGAATGGCTTCT GAGGAAAGGGGAGGTCCTGCTAATTCCTCAGAATGGCTTCT < 41bp 0.466711599908196 0.849666304130389 0.226713 0.33907878 prediction 0.699332608260778 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468437 chr6:26468438 synonymous SNV . 0 22 hPsi_associated_SNPs_22071 0 0 1 1 0 Endoplasmic reticulum 0.438718591660419 0.438718592995147 0 0 hPsi_site_15795 iPseU_CNN:0;iRNA_PseU:0 15796 chr7 150746204 150746204 1 + G A HNSC 150746203 + 150746183 150746223 41 CACCACCAGACTGCCCTGGATGAGCGAGAAAGCCACCGGCT CACCACCAGACTGCCCTGGATAAGCGAGAAAGCCACCGGCT < 41bp 0.532642149981417 0.882300078349755 0.31604528 0.73526 prediction 0.699315856736676 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746203 chr7:150746204 nonsynonymous SNV 0.726 3 22 hPsi_associated_SNPs_22072 0 0 0 0 0 exosome 0.438718033166211 0.438718595510526 0.47052 0 hPsi_site_15796 iPseU_CNN:0.47052;iRNA_PseU:0 15797 chr2 220046385 220046385 1 + G A rs2272018 220046384 + 220046364 220046404 41 GGATGTGAAGAAAACAGCATTGGCCTTGGCCATTACAGACT GGATGTGAAGAAAACAGCATTAGCCTTGGCCATTACAGACT < 41bp 0.44280717699784 0.84965410400186 0.15967265 0.22472826 prediction 0.69930820800372 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220046384 chr2:220046385 synonymous SNV . 0 22 hPsi_associated_SNPs_22073 0 0 1 0 1 unknown 0.438718592995376 0.438718598386729 0 0 hPsi_site_15797 iPseU_CNN:0;iRNA_PseU:0 15798 chr16 88780090 88780090 1 + G A rs2290904 88780089 + 88780069 88780109 41 GCGGCACGGGGACGTGGTGGTGGTGCGGCCCATGCGGGACC GCGGCACGGGGACGTGGTGGTAGTGCGGCCCATGCGGGACC < 41bp 0.545735615773189 0.895383118305558 0.30529618 0.8535938 prediction 0.699295005064739 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780089 chr16:88780090 synonymous SNV . 0 22 hPsi_associated_SNPs_22074 0 0 1 0 2 Cytosol 0.438708874106511 0.438910678973754 0.7071876 0 hPsi_site_15798 iPseU_CNN:0.7071876;iRNA_PseU:0 15799 chr12 49723686 49723686 1 + C A UCEC 49723685 + 49723665 49723705 41 ACCAGGAGAGTTGTATAAGGTCACTGGAGGGTTCTGGGAAA ACCAGGAGAGTTGTATAAGGTAACTGGAGGGTTCTGGGAAA < 41bp 0.496580010730863 0.849642055422915 0.1981062 0.58485574 prediction 0.699284110845829 Functional Gain - TROAP ENSG00000135451 CDS Human protein_coding chr12:49723685 chr12:49723686 stopgain 0.000 0 22 hPsi_associated_SNPs_22075 0 0 1 0 2 Ribosome 0.438718582459936 0.438718545131114 0.16971148 0 hPsi_site_15799 iPseU_CNN:0.16971148;iRNA_PseU:0 15800 chrX 49173751 49173751 1 + G A KIRC 49173750 + 49173730 49173770 41 CCTGCCAAATCCAGAGGAGGTGAAAAGGCCTGAAGAAGGTA CCTGCCAAATCCAGAGGAGGTAAAAAGGCCTGAAGAAGGTA < 41bp 0.468754508411913 0.849621126196585 0.20351025 0.2569509 prediction 0.699242252393171 Functional Gain - GAGE10 ENSG00000215274 CDS Human protein_coding chrX:49173750 chrX:49173751 synonymous SNV . 0 22 hPsi_associated_SNPs_22076 0 0 0 0 1 Ribosome 0.438718561937954 0.438718591423797 0 0 hPsi_site_15800 iPseU_CNN:0;iRNA_PseU:0 15801 chr4 96762070 96762070 1 + G A LUAD 96762069 + 96762049 96762089 41 CTAAAGGTCGATGGAATGGATGTTCTGTGTGTTCGTGAGGC CTAAAGGTCGATGGAATGGATATTCTGTGTGTTCGTGAGGC < 41bp 0.516414428485493 0.86603406663954 0.32195228 0.28464383 prediction 0.699239276308093 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96762069 chr4:96762070 nonsynonymous SNV 0.580 1 22 hPsi_associated_SNPs_22077 0 0 0 0 0 unknown 0.438718611116114 0.438718668372111 0 0 hPsi_site_15801 iPseU_CNN:0;iRNA_PseU:0 15802 chr17 51901498 51901498 1 + G A HNSC 51901497 + 51901477 51901517 41 GGGCAAGGTGTATGATTTGTTGAACTGGAAGAAGAAGCTGC GGGCAAGGTGTATGATTTGTTAAACTGGAAGAAGAAGCTGC < 41bp 0.4699602050714 0.849616431379768 0.318481 0.38808668 prediction 0.699232862759537 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901497 chr17:51901498 synonymous SNV . 0 22 hPsi_associated_SNPs_22078 0 0 0 0 0 exosome 0.438686877988784 0.438694459560358 0 0 hPsi_site_15802 iPseU_CNN:0;iRNA_PseU:0 15803 chr1 173839444 173839444 1 + G A UCEC 173839443 + 173839423 173839463 41 CCATCTAAACCAGTTGCGCATGCAGGGCCGTCTCTGTGATA CCATCTAAACCAGTTGCGCATACAGGGCCGTCTCTGTGATA < 41bp 0.463886230022953 0.849615637686884 0.27988786 0.56109023 prediction 0.699231275373769 Functional Gain - ZBTB37 ENSG00000185278 CDS Human protein_coding chr1:173839443 chr1:173839444 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22079 0 0 0 0 0 chromatin 0.438718767930469 0.438718589255048 0.12218046 0 hPsi_site_15803 iPseU_CNN:0.12218046;iRNA_PseU:0 15804 chr14 75248324 75248324 1 + G A UCEC 75248323 + 75248303 75248343 41 TTTTGTTCCATATTCTCAGATGCCTCCACCTCTACCTACAA TTTTGTTCCATATTCTCAGATACCTCCACCTCTACCTACAA < 41bp 0.457680588671821 0.849613131189963 0.29721642 0.644995 prediction 0.699226262379926 Functional Gain - YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75248323 chr14:75248324 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22080 0 0 1 0 0 Cytosol 0.438953098758491 0.438678547504835 0.28999 0 hPsi_site_15804 iPseU_CNN:0.28999;iRNA_PseU:0 15805 chr13 25670559 25670559 1 + G A SKCM 25670558 + 25670538 25670578 41 GCTCTGGACACCATGAATTTTGATGTTATAAAGGGCAAGCC GCTCTGGACACCATGAATTTTAATGTTATAAAGGGCAAGCC < 41bp 0.523620911688248 0.873233414632571 0.27353668 0.23883274 prediction 0.699225005888646 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670558 chr13:25670559 nonsynonymous SNV 0.071 1 22 hPsi_associated_SNPs_22081 0 0 0 0 0 Cytosol 0.438718840518196 0.438713121713076 0 0 hPsi_site_15805 iPseU_CNN:0;iRNA_PseU:0 15806 chr15 42113896 42113896 1 + G A HNSC 42113895 + 42113875 42113915 41 GATCTGGAACCTGCACCCATTGAAGATGGTATTGTCTACCC GATCTGGAACCTGCACCCATTAAAGATGGTATTGTCTACCC < 41bp 0.450253791278043 0.849607455565524 0.1575318 0.20343837 prediction 0.699214911131047 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42113895 chr15:42113896 nonsynonymous SNV 0.950 3 22 hPsi_associated_SNPs_22082 0 0 1 0 0 Endoplasmic reticulum 0.439049558707615 0.438711889664361 0 0 hPsi_site_15806 iPseU_CNN:0;iRNA_PseU:0 15807 chr17 27182086 27182086 1 + G A LUAD 27182085 + 27182065 27182105 41 AGCTGGCGCGGGGCTAGGCTTGTTCAATCGGTGTTAAGAGT AGCTGGCGCGGGGCTAGGCTTATTCAATCGGTGTTAAGAGT < 41bp 0.517805902122874 0.867395146250501 0.33823568 0.50230587 prediction 0.699178488255252 Functional Gain - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27182085 chr17:27182086 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_22083 0 0 1 0 0 Ribosome 0.43871859303958 0.438718593058574 0.00461174000000009 0 hPsi_site_15807 iPseU_CNN:0.00461174000000009;iRNA_PseU:0 15808 chr8 55060079 55060079 1 + G A BLCA 55060078 + 55060058 55060098 41 GCGGATCCTGCCAAATTTCCTGAAGCACGACTTGAACTCGC GCGGATCCTGCCAAATTTCCTAAAGCACGACTTGAACTCGC < 41bp 0.530333305758108 0.879914190312258 0.22344509 0.3348842 prediction 0.699161769108299 Functional Gain - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060078 chr8:55060079 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22084 0 0 1 0 0 Cytosol 0.438718592996359 0.438718592995102 0 0 hPsi_site_15808 iPseU_CNN:0;iRNA_PseU:0 15809 chr1 156105868 156105868 1 + G A SKCM 156105867 + 156105847 156105887 41 CATCAAGCTGGCCCTGGACATGGAGATCCACGCCTACCGCA CATCAAGCTGGCCCTGGACATAGAGATCCACGCCTACCGCA < 41bp 0.452977932088878 0.849578532276975 0.27774867 0.48867145 prediction 0.699157064553951 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156105867 chr1:156105868 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22085 0 0 1 0 1 Cytosol 0.436422367188824 0.442081775757464 0 0 hPsi_site_15809 iPseU_CNN:0;iRNA_PseU:0 15810 chr4 8602885 8602885 1 + G A rs570219062 8602884 + 8602864 8602904 41 CTGCAGCTCAGGACCTGCAGTGATGCCGCCTACAACCACAC CTGCAGCTCAGGACCTGCAGTAATGCCGCCTACAACCACAC < 41bp 0.45477058015295 0.849578475128794 0.32957008 0.66825724 prediction 0.699156950257589 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8602884 chr4:8602885 nonsynonymous SNV 0.019 4 22 hPsi_associated_SNPs_22086 0 0 1 0 1 Endoplasmic reticulum 0.438824805444281 0.438755594983032 0.33651448 0 hPsi_site_15810 iPseU_CNN:0.33651448;iRNA_PseU:0 15811 chr12 133780309 133780309 1 + G A rs36127550 133780308 + 133780288 133780328 41 ATGTGCAAAAACCTTTAGTTTGAAGTCCCAGCTCATTGTAC ATGTGCAAAAACCTTTAGTTTAAAGTCCCAGCTCATTGTAC < 41bp 0.508851873540956 0.85842974815879 0.4157653 0.77704597 prediction 0.699155749235669 Functional Gain - ZNF268 ENSG00000090612 CDS Human protein_coding chr12:133780308 chr12:133780309 synonymous SNV . 0 22 hPsi_associated_SNPs_22087 0 1 1 0 0 chromatin 0.43860047062422 0.438606564095722 0.55409194 0 hPsi_site_15811 iPseU_CNN:0.55409194;iRNA_PseU:0 15812 chr5 78936948 78936948 1 + G A UCEC 78936947 + 78936927 78936967 41 GAAAGCAGACTTTTTTTGGTTGGGTCCTCTTTAAATGGATT GAAAGCAGACTTTTTTTGGTTAGGTCCTCTTTAAATGGATT < 41bp 0.534771943334267 0.884348473034516 0.25188065 0.6816574 prediction 0.699153059400497 Functional Gain - PAPD4 ENSG00000164329 CDS Human protein_coding chr5:78936947 chr5:78936948 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_22088 0 0 1 0 2 Ribosome 0.43871824029857 0.438725827946818 0.3633148 0 hPsi_site_15812 iPseU_CNN:0.3633148;iRNA_PseU:0 15813 chr6 44274729 44274729 1 + G T UCEC 44274730 - 44274710 44274750 41 CCTGCGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGG CCTGCGTCGAGCTGTGCGTTTATCCATGGAGATCTTAAAGG < 41bp 0.491376014173167 0.849575900850891 0.71409345 0.78822535 prediction 0.699151801701783 Functional Gain - AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274730 chr6:44274729 nonsynonymous SNV 0.148 2 22 hPsi_associated_SNPs_22089 0 0 1 0 2 Endoplasmic reticulum 0.438718592995508 0.438718592959787 0.1482638 0 hPsi_site_15813 iPseU_CNN:0.1482638;iRNA_PseU:0 15814 chr16 1584494 1584494 1 + G A UCEC 1584493 + 1584473 1584513 41 GCCAGGTGGACGCACATGACTGTGAGGCGCTGGGCTGGGGC GCCAGGTGGACGCACATGACTATGAGGCGCTGGGCTGGGGC < 41bp 0.474521947548724 0.849574823789377 0.3179637 0.39419788 prediction 0.699149647578754 Functional Gain - TMEM204 ENSG00000131634 CDS Human protein_coding chr16:1584493 chr16:1584494 nonsynonymous SNV 0.795 4 22 hPsi_associated_SNPs_22090 0 0 0 0 1 nucleolus 0.438755163439735 0.438701833571474 0 0 hPsi_site_15814 iPseU_CNN:0;iRNA_PseU:0 15815 chr11 48267238 48267238 1 + G A SKCM 48267237 + 48267217 48267257 41 GGTCTGCTGATTGTTGCCAATGGAGGCACCCTGTCTGTGAT GGTCTGCTGATTGTTGCCAATAGAGGCACCCTGTCTGTGAT < 41bp 0.512330120954184 0.861903025224091 0.21885562 0.26455218 prediction 0.699145808539814 Functional Gain - OR4X2 ENSG00000172208 CDS Human polymorphic_pseudogene chr11:48267237 chr11:48267238 nonsynonymous SNV 0.122 4 22 hPsi_associated_SNPs_22091 0 0 0 0 0 unknown 0.438718680486509 0.438718592908422 0 0 hPsi_site_15815 iPseU_CNN:0;iRNA_PseU:0 15816 chr1 24673992 24673992 1 + G A PRAD 24673991 + 24673971 24674011 41 GCGGAGGGAGACTGAGGAGGTGTTTGACGCGCTCATGTTGA GCGGAGGGAGACTGAGGAGGTATTTGACGCGCTCATGTTGA < 41bp 0.546041996364369 0.895601249173806 0.5487771 0.7730764 prediction 0.699118505618874 Functional Gain - GRHL3 ENSG00000158055 CDS Human protein_coding chr1:24673991 chr1:24673992 synonymous SNV . 0 22 hPsi_associated_SNPs_22092 0 0 0 0 2 Nucleus 0.438393338785891 0.438721063611958 0.4485986 0 hPsi_site_15816 iPseU_CNN:0.4485986;iRNA_PseU:0 15817 chr19 41518231 41518231 1 + G A PAAD 41518230 + 41518210 41518250 41 CTACAGGGAGATTGAACAGGTGATTGGCCCACATCGCCCTC CTACAGGGAGATTGAACAGGTAATTGGCCCACATCGCCCTC < 41bp 0.446717935728505 0.849550987522412 0.30344796 0.7724889 prediction 0.699101975044824 Functional Gain - CYP2B6 ENSG00000197408 CDS Human protein_coding chr19:41518230 chr19:41518231 synonymous SNV . 0 22 hPsi_associated_SNPs_22093 0 0 0 0 1 Nucleus 0.438718560254506 0.438723563226617 0.5449778 0 hPsi_site_15817 iPseU_CNN:0.5449778;iRNA_PseU:0 15818 chr16 27375556 27375556 1 + G A rs150183816 27375555 + 27375535 27375575 41 GGCCCACGTGGAGGCCCACCTGCCTCTGTCTCACTGAACTA GGCCCACGTGGAGGCCCACCTACCTCTGTCTCACTGAACTA < 41bp 0.493403665154187 0.849548061951083 0.30121106 0.61990726 prediction 0.699096123902166 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27375555 chr16:27375556 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22094 0 0 1 0 0 Endoplasmic reticulum 0.438718668187064 0.438718859619114 0.23981452 0 hPsi_site_15818 iPseU_CNN:0.23981452;iRNA_PseU:0 15819 chr2 70502222 70502222 1 + C A GBM 70502221 + 70502201 70502241 41 CCTTGCAAAAGGCCGGCTTTTCTGAGAAGTTCCTCAATGAA CCTTGCAAAAGGCCGGCTTTTATGAGAAGTTCCTCAATGAA < 41bp 0.501112652100674 0.850656503833439 0.28438023 0.60327953 prediction 0.699087703465531 Functional Gain - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70502221 chr2:70502222 nonsynonymous SNV 0.977 4 22 hPsi_associated_SNPs_22095 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995102 0.20655906 0 hPsi_site_15819 iPseU_CNN:0.20655906;iRNA_PseU:0 15820 chr14 55818472 55818472 1 + G A rs144291873 55818471 + 55818451 55818491 41 ATCAAAGAAAAGAATCTTTGTGCATTAGTATCACTGTGTCC ATCAAAGAAAAGAATCTTTGTACATTAGTATCACTGTGTCC < 41bp 0.460978518752932 0.849530900313703 0.28041962 0.25588003 prediction 0.699061800627406 Functional Gain - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55818471 chr14:55818472 nonsynonymous SNV 0.726 2 22 hPsi_associated_SNPs_22096 0 0 1 0 0 Nucleus 0.438710115244166 0.438719329722253 0 0 hPsi_site_15820 iPseU_CNN:0;iRNA_PseU:0 15821 chr16 56878529 56878529 1 + G A UCEC 56878528 + 56878508 56878548 41 TCCTCATGAATTAAGTGCCATGCTTTGTGGGAGTCTGGGTC TCCTCATGAATTAAGTGCCATACTTTGTGGGAGTCTGGGTC < 41bp 0.46856084669157 0.849523077505268 0.20470285 0.25717404 prediction 0.699046155010535 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56878528 chr16:56878529 nonsynonymous SNV 0.673 1 22 hPsi_associated_SNPs_22097 0 0 1 1 0 Nucleus 0.438754556024532 0.439231119137529 0 0 hPsi_site_15821 iPseU_CNN:0;iRNA_PseU:0 15822 chr1 201287900 201287900 1 + C A UCEC 201287899 + 201287879 201287919 41 AGTGGTGGACCCTGAGGTCTTCTTCAATGCCACAGGCTGCT AGTGGTGGACCCTGAGGTCTTATTCAATGCCACAGGCTGCT < 41bp 0.497540260315509 0.849517792633459 0.41071144 0.5176043 prediction 0.699035585266917 Functional Gain - PKP1 ENSG00000081277 CDS Human protein_coding chr1:201287899 chr1:201287900 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22098 0 0 0 0 1 exosome 0.438717774942918 0.44124969925911 0.0352086 0 hPsi_site_15822 iPseU_CNN:0.0352086;iRNA_PseU:0 15823 chr14 69992720 69992720 1 + G A UCEC 69992719 + 69992699 69992739 41 GGAGGAGAACGAGAACCACCTGCAGACACTGGCCAATCAGA GGAGGAGAACGAGAACCACCTACAGACACTGGCCAATCAGA < 41bp 0.485847494909035 0.849515548654296 0.2507514 0.3284048 prediction 0.699031097308591 Functional Gain - PLEKHD1 ENSG00000175985 CDS Human protein_coding chr14:69992719 chr14:69992720 synonymous SNV . 0 22 hPsi_associated_SNPs_22099 0 0 0 0 1 exosome 0.438548638583273 0.438902241140249 0 0 hPsi_site_15823 iPseU_CNN:0;iRNA_PseU:0 15824 chr4 517379 517379 1 + G A BLCA 517378 + 517358 517398 41 CCAGACCTGGTACTTCCTTGTGAACACCCTGTGTCTAGCTC CCAGACCTGGTACTTCCTTGTAAACACCCTGTGTCTAGCTC < 41bp 0.542080191271391 0.89159470415455 0.3325668 0.7284676 prediction 0.699029025766318 Functional Gain - PIGG ENSG00000174227 CDS Human protein_coding chr4:517378 chr4:517379 synonymous SNV . 0 22 hPsi_associated_SNPs_22100 0 0 1 0 0 Nucleus 0.438738144863638 0.438716054532891 0.4569352 0 hPsi_site_15824 iPseU_CNN:0.4569352;iRNA_PseU:0 15825 chr10 85972974 85972974 1 + C A LUAD 85972973 + 85972953 85972993 41 GGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAAC GGCTCAAGAATTCCATCCGCTACCTGGATGCCCTGCACAAC < 41bp 0.514021146069366 0.863530846866142 0.25011384 0.76547337 prediction 0.699019401593552 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85972973 chr10:85972974 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_22101 0 0 0 0 0 cytosol 0.438718606105487 0.438718622333028 0.53094674 0 hPsi_site_15825 iPseU_CNN:0.53094674;iRNA_PseU:0 15826 chr15 101454932 101454932 1 + C T UCEC 101454933 - 101454913 101454953 41 ATGGTGACAGTTTTCACTTCTGTGTATTCGGCCAAAGCGTA ATGGTGACAGTTTTCACTTCTATGTATTCGGCCAAAGCGTA < 41bp 0.479640261428914 0.84948734621169 0.24815261 0.29514897 prediction 0.698974692423379 Functional Gain - ALDH1A3 ENSG00000184254 CDS Human protein_coding chr15:101454933 chr15:101454932 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22102 0 0 0 0 0 Nucleus 0.438718592993404 0.438718592993321 0 0 hPsi_site_15826 iPseU_CNN:0;iRNA_PseU:0 15827 chr6 35427150 35427150 1 + G A UCEC 35427149 + 35427129 35427169 41 GCCTCCCGCCTGCTTACAACTGCCCTGACCTCCTTCTGTGC GCCTCCCGCCTGCTTACAACTACCCTGACCTCCTTCTGTGC < 41bp 0.438591675648826 0.849481859351359 0.1729765 0.5651702 prediction 0.698963718702717 Functional Gain - FANCE ENSG00000112039 CDS Human protein_coding chr6:35427149 chr6:35427150 nonsynonymous SNV 0.016 3 22 hPsi_associated_SNPs_22103 0 0 0 0 2 Ribosome 0.438719424099936 0.438805701753726 0.1303404 0 hPsi_site_15827 iPseU_CNN:0.1303404;iRNA_PseU:0 15828 chr17 33289264 33289264 1 + G A BLCA 33289263 + 33289243 33289283 41 ATTCCTCATTCAGGGTCAATTGAGAAAGCAGAAATACATGA ATTCCTCATTCAGGGTCAATTAAGAAAGCAGAAATACATGA < 41bp 0.514730152021575 0.864209304073462 0.24832156 0.3415377 prediction 0.698958304103774 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33289263 chr17:33289264 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_22104 0 0 0 0 0 Cytosol 0.438762598920829 0.438687252347406 0 0 hPsi_site_15828 iPseU_CNN:0;iRNA_PseU:0 15829 chr19 51645921 51645921 1 + G A LIHC 51645920 + 51645900 51645940 41 CGGGACCGATTCCACCTCCTTGGGGACCCACAGACCAAAAA CGGGACCGATTCCACCTCCTTAGGGACCCACAGACCAAAAA < 41bp 0.454320024769467 0.849475383428263 0.26107368 0.35366178 prediction 0.698950766856527 Functional Gain - SIGLEC7 ENSG00000168995 CDS Human protein_coding chr19:51645920 chr19:51645921 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_22105 0 0 0 0 0 exosome 0.438718592992553 0.438591131112215 0 0 hPsi_site_15829 iPseU_CNN:0;iRNA_PseU:0 15830 chr14 93263849 93263849 1 + G A UCEC 93263848 + 93263828 93263868 41 AACCGAGTTGATCAAGGGGCTGCAACAGCTCTCAGTAGGAA AACCGAGTTGATCAAGGGGCTACAACAGCTCTCAGTAGGAA < 41bp 0.528857224336436 0.878331619143268 0.27722496 0.39973804 prediction 0.698948789613664 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93263848 chr14:93263849 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22106 0 0 1 0 1 chromatin 0.438718021912922 0.438718811558666 0 0 hPsi_site_15830 iPseU_CNN:0;iRNA_PseU:0 15831 chr2 241535790 241535790 1 + G A LUAD 241535789 + 241535769 241535809 41 CTGTCCATGCCCCCCGTGGCTGGCACCGCGTGCCATGCATA CTGTCCATGCCCCCCGTGGCTAGCACCGCGTGCCATGCATA < 41bp 0.466776880701072 0.849464091645405 0.13031816 0.3107894 prediction 0.698928183290811 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241535789 chr2:241535790 nonsynonymous SNV 0.584 2 22 hPsi_associated_SNPs_22107 0 0 1 0 1 cytosol 0.438716184798422 0.438696044574066 0 0 hPsi_site_15831 iPseU_CNN:0;iRNA_PseU:0 15832 chr8 126445609 126445609 1 + G A UCEC 126445608 + 126445588 126445628 41 AATCAGGCCTTACATCCAGCTGCCATCGCACAGCAACATTA AATCAGGCCTTACATCCAGCTACCATCGCACAGCAACATTA < 41bp 0.541383583471393 0.890841153640958 0.109549046 0.2774271 prediction 0.698915140339128 Functional Gain - TRIB1 ENSG00000173334 CDS Human protein_coding chr8:126445608 chr8:126445609 synonymous SNV . 0 22 hPsi_associated_SNPs_22108 0 0 0 0 1 Cytosol 0.438563480870376 0.438926440382747 0 0 hPsi_site_15832 iPseU_CNN:0;iRNA_PseU:0 15833 chr12 51450186 51450186 1 + G A BLCA 51450185 + 51450165 51450205 41 TTACCTGCCTCCTCCCTTGTTGAGACATCGTTTGAAGACTC TTACCTGCCTCCTCCCTTGTTAAGACATCGTTTGAAGACTC < 41bp 0.451295313856727 0.849451938380826 0.32477888 0.55907667 prediction 0.698903876761652 Functional Gain - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51450185 chr12:51450186 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22109 0 0 1 0 1 chromatin 0.438700767669192 0.438721550076356 0.11815334 0 hPsi_site_15833 iPseU_CNN:0.11815334;iRNA_PseU:0 15834 chr10 62552035 62552035 1 + G A rs371690253 62552034 + 62552014 62552054 41 AAACTTGGATGAAAATGGCTTGGATTTGCTCTCGGTAAGGA AAACTTGGATGAAAATGGCTTAGATTTGCTCTCGGTAAGGA < 41bp 0.48237498962636 0.849444315129189 0.33094 0.44719052 prediction 0.698888630258378 Functional Gain - CDK1 ENSG00000170312 CDS Human protein_coding chr10:62552034 chr10:62552035 synonymous SNV . 0 22 hPsi_associated_SNPs_22110 0 0 1 1 1 Ribosome 0.438728027707332 0.438767477589892 0 0 hPsi_site_15834 iPseU_CNN:0;iRNA_PseU:0 15835 chr17 59556115 59556115 1 + C A UCEC 59556114 + 59556094 59556134 41 TCCCAGAGACCTCCTTCATCTCTGTGACCTCCTACCAGAAT TCCCAGAGACCTCCTTCATCTATGTGACCTCCTACCAGAAT < 41bp 0.484206740202046 0.849441475741911 0.2587973 0.3526312 prediction 0.698882951483822 Functional Gain - TBX4 ENSG00000121075 CDS Human protein_coding chr17:59556114 chr17:59556115 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22111 0 0 0 0 1 exosome 0.423682571699663 0.439903287768429 0 0 hPsi_site_15835 iPseU_CNN:0;iRNA_PseU:0 15836 chr19 33183266 33183266 1 + G A rs532080158 33183265 + 33183245 33183285 41 TGCGCCGTGCGGGAGGCCTTTGAGGAGGCGGGCGTGCTGCT TGCGCCGTGCGGGAGGCCTTTAAGGAGGCGGGCGTGCTGCT < 41bp 0.534623139582879 0.884061142588962 0.5871991 0.76746786 prediction 0.698876006012165 Functional Gain - NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33183265 chr19:33183266 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_22112 0 0 1 0 0 Ribosome 0.438717671995489 0.438718642983222 0.36053752 0 hPsi_site_15836 iPseU_CNN:0.36053752;iRNA_PseU:0 15837 chr4 40356123 40356123 1 + G A SKCM 40356122 + 40356102 40356142 41 CTGGGCCAGGGTGGTCATCCTGAAATACATGTCCAGGGTCT CTGGGCCAGGGTGGTCATCCTAAAATACATGTCCAGGGTCT < 41bp 0.472959099196294 0.849431773484484 0.24719208 0.4977328 prediction 0.698863546968968 Functional Gain - CHRNA9 ENSG00000174343 CDS Human protein_coding chr4:40356122 chr4:40356123 synonymous SNV . 0 22 hPsi_associated_SNPs_22113 0 0 0 0 0 nucleus 0.438718591646537 0.438718592989898 0 0 hPsi_site_15837 iPseU_CNN:0;iRNA_PseU:0 15838 chr11 61133649 61133649 1 + G A rs35245221 61133648 + 61133628 61133668 41 GACCATCATCCTGACAGCTGTGTACTTTGCCCTCAGCATCT GACCATCATCCTGACAGCTGTATACTTTGCCCTCAGCATCT < 41bp 0.544526672444638 0.893957436524799 0.3113097 0.39878586 prediction 0.698861528160321 Functional Gain - TMEM138 ENSG00000149483 CDS Human protein_coding chr11:61133648 chr11:61133649 synonymous SNV . 0 22 hPsi_associated_SNPs_22114 2 0 1 0 1 Endoplasmic reticulum 0.438750851399694 0.438720103470568 0 0 hPsi_site_15838 iPseU_CNN:0;iRNA_PseU:0 15839 chr1 174417843 174417843 1 + C T CESC 174417844 - 174417824 174417864 41 GCCAGTAAAATAGGCACTGGTGAGCCAAGACGTGGCACACC GCCAGTAAAATAGGCACTGGTAAGCCAAGACGTGGCACACC < 41bp 0.517493240887581 0.866911111352876 0.23329812 0.5625935 prediction 0.69883574093059 Functional Gain - GPR52 ENSG00000203737 CDS Human protein_coding chr1:174417844 chr1:174417843 synonymous SNV . 0 22 hPsi_associated_SNPs_22115 0 0 0 0 0 exosome 0.438718525890393 0.438718593546504 0.125187 0 hPsi_site_15839 iPseU_CNN:0.125187;iRNA_PseU:0 15840 chr1 41454354 41454354 1 + G A LUAD 41454353 + 41454333 41454373 41 AGGTCAAAAGAGAGAACTTTTGTAACATCCACGTCAGTCTA AGGTCAAAAGAGAGAACTTTTATAACATCCACGTCAGTCTA < 41bp 0.519738542495708 0.869145520451933 0.34713784 0.5842425 prediction 0.698813955912451 Functional Gain - CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41454353 chr1:41454354 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22116 0 0 1 0 2 Nucleus 0.437744009563843 0.438499698973513 0.168485 0 hPsi_site_15840 iPseU_CNN:0.168485;iRNA_PseU:0 15841 chr1 55148378 55148378 1 + G A BLCA 55148377 + 55148357 55148397 41 ATACTGTGTAAGCCCAGCTGTGATGTCCGAGACCTCCTGGA ATACTGTGTAAGCCCAGCTGTAATGTCCGAGACCTCCTGGA < 41bp 0.447060013459585 0.849403204708782 0.3223389 0.5177663 prediction 0.698806409417564 Functional Gain - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55148377 chr1:55148378 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_22117 0 0 0 0 1 exosome 0.438821423654486 0.438779168829664 0.0355326 0 hPsi_site_15841 iPseU_CNN:0.0355326;iRNA_PseU:0 15842 chr2 74129532 74129532 1 + G A CESC 74129531 + 74129511 74129551 41 AAAGACAGCTATGTGGGGGATGAGGCTCAGAGCAAGCGAGG AAAGACAGCTATGTGGGGGATAAGGCTCAGAGCAAGCGAGG < 41bp 0.449832854479012 0.849396780391594 0.19627616 0.47921664 prediction 0.698793560783187 Functional Gain - ACTG2 ENSG00000163017 CDS Human protein_coding chr2:74129531 chr2:74129532 nonsynonymous SNV 0.948 3 22 hPsi_associated_SNPs_22118 0 0 0 0 1 Cytosol 0.438718593340518 0.438706189099274 0 0 hPsi_site_15842 iPseU_CNN:0;iRNA_PseU:0 15843 chr17 60758276 60758276 1 + G A UCEC 60758275 + 60758255 60758295 41 CCAGGCCGAGCTGACCTCGGTGCACAGCCAGGCGGAGCTAG CCAGGCCGAGCTGACCTCGGTACACAGCCAGGCGGAGCTAG < 41bp 0.454543050451121 0.849395922311216 0.66776675 0.88644195 prediction 0.698791844622432 Functional Gain - MRC2 ENSG00000011028 CDS Human protein_coding chr17:60758275 chr17:60758276 synonymous SNV . 0 22 hPsi_associated_SNPs_22119 0 0 0 0 1 Cytosol 0.438719253936446 0.438429536118099 0.4373504 0 hPsi_site_15843 iPseU_CNN:0.4373504;iRNA_PseU:0 15844 chr22 38206084 38206084 1 + G A BRCA 38206083 + 38206063 38206103 41 CTGGGCCTGAGCAGCCACCCTGAGGTGATCCAGGCAGGTCT CTGGGCCTGAGCAGCCACCCTAAGGTGATCCAGGCAGGTCT < 41bp 0.453432394084861 0.849389686824286 0.2279745 0.24944016 prediction 0.698779373648572 Functional Gain - GCAT ENSG00000100116 CDS Human protein_coding chr22:38206083 chr22:38206084 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_22120 0 0 0 0 2 Cytosol 0.438718551978853 0.438718594136439 0 0 hPsi_site_15844 iPseU_CNN:0;iRNA_PseU:0 15845 chr11 47600563 47600563 1 + C T rs555673490 47600564 - 47600544 47600584 41 GCACGGACCGGAAACGGAAGTGTGCAGCAGATCTTCTTCCG GCACGGACCGGAAACGGAAGTATGCAGCAGATCTTCTTCCG < 41bp 0.527458254772645 0.876825373528821 0.5669682 0.7109059 prediction 0.698734237512352 Functional Gain - KBTBD4;NDUFS3 ENSG00000123444;ENSG00000213619 UTR5 Human other chr11:47600564 chr11:47600563 . . 0 22 hPsi_associated_SNPs_22121 0 0 0 0 1 unknown 0.438760387751335 0.438818873205436 0.2878754 0 hPsi_site_15845 iPseU_CNN:0.2878754;iRNA_PseU:0 15846 chr3 48422270 48422270 1 + G A UCEC 48422269 + 48422249 48422289 41 TTTCTCCCACATAAATTATGTGCCAGCGCCTGCTGGACCCC TTTCTCCCACATAAATTATGTACCAGCGCCTGCTGGACCCC < 41bp 0.536843666820697 0.886203245386937 0.18154562 0.34477767 prediction 0.69871915713248 Functional Gain - FBXW12 ENSG00000164049 CDS Human protein_coding chr3:48422269 chr3:48422270 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22122 0 0 0 0 1 exosome 0.43871895611447 0.438718566457854 0 0 hPsi_site_15846 iPseU_CNN:0;iRNA_PseU:0 15847 chr17 78327375 78327375 1 + C T rs139113160 78327376 - 78327356 78327396 41 GCCACCTCTGCCACCTCCCCTGATGTGCTGGCCTCCGTCTC GCCACCTCTGCCACCTCCCCTAATGTGCTGGCCTCCGTCTC < 41bp 0.471552392295408 0.849339736680849 0.25612724 0.31972492 prediction 0.698679473361699 Functional Gain - RNF213 ENSG00000173821 CDS Human protein_coding chr17:78327376 chr17:78327375 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_22123 0 0 0 0 0 Nucleus 0.438718448859791 0.438718595675722 0 0 hPsi_site_15847 iPseU_CNN:0;iRNA_PseU:0 15848 chr14 24592406 24592406 1 + G A LUSC 24592405 + 24592385 24592425 41 GGGACGGGAACCTGCGTCTGTGGCAGTACCGCCAGGCTGAG GGGACGGGAACCTGCGTCTGTAGCAGTACCGCCAGGCTGAG < 41bp 0.53869353222407 0.888028178246331 0.2102206 0.30954206 prediction 0.698669292044522 Functional Gain - DCAF11 ENSG00000100897 CDS Human protein_coding chr14:24592405 chr14:24592406 stopgain 0.993 1 22 hPsi_associated_SNPs_22124 0 0 1 0 1 Ribosome 0.438718726023027 0.438713105260504 0 0 hPsi_site_15848 iPseU_CNN:0;iRNA_PseU:0 15849 chr6 47682138 47682138 1 + C A LUSC 47682137 + 47682117 47682157 41 ACTACACCAGTGTGGTGATGTCTTTTTCCATTCTCATGTCC ACTACACCAGTGTGGTGATGTATTTTTCCATTCTCATGTCC < 41bp 0.505085189281182 0.854416197967564 0.3136505 0.57155585 prediction 0.698662017372765 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47682137 chr6:47682138 nonsynonymous SNV 0.946 4 22 hPsi_associated_SNPs_22125 0 0 0 0 0 exosome 0.438721346420728 0.438706314274075 0.1431117 0 hPsi_site_15849 iPseU_CNN:0.1431117;iRNA_PseU:0 15850 chr7 5923591 5923591 1 + G A LUSC 5923590 + 5923570 5923610 41 GAAACCAAGTCCTTGATGGCTGCGGCGGATAATGATGGAGA GAAACCAAGTCCTTGATGGCTACGGCGGATAATGATGGAGA < 41bp 0.465635717202604 0.849328092191156 0.18548688 0.31063545 prediction 0.698656184382312 Functional Gain - OCM ENSG00000122543 CDS Human protein_coding chr7:5923590 chr7:5923591 nonsynonymous SNV 0.532 4 22 hPsi_associated_SNPs_22126 0 0 0 0 1 exosome 0.438718462540038 0.43875702513192 0 0 hPsi_site_15850 iPseU_CNN:0;iRNA_PseU:0 15851 chr19 41622495 41622495 1 + G A rs76335535 41622494 + 41622474 41622514 41 AGTGGCCGCGGTGACTACCCTGCCTTTTTCAACTTTACCAA AGTGGCCGCGGTGACTACCCTACCTTTTTCAACTTTACCAA < 41bp 0.453829935529348 0.84932548845278 0.2714255 0.3157441 prediction 0.69865097690556 Functional Gain - CYP2F1 ENSG00000197446 CDS Human protein_coding chr19:41622494 chr19:41622495 nonsynonymous SNV 0.195 0 22 hPsi_associated_SNPs_22127 0 0 0 0 1 exosome 0.438719043975547 0.438718316614754 0 0 hPsi_site_15851 iPseU_CNN:0;iRNA_PseU:0 15852 chr19 42793063 42793063 1 + G A GBM 42793062 + 42793042 42793082 41 TCCTCTGAGCTCCTGTCCGTTGCAGCCCAGACACTCCTGAG TCCTCTGAGCTCCTGTCCGTTACAGCCCAGACACTCCTGAG < 41bp 0.543097852504555 0.892418492147614 0.31074676 0.91566867 prediction 0.698641279286117 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42793062 chr19:42793063 nonsynonymous SNV 0.661 1 22 hPsi_associated_SNPs_22128 0 0 1 0 0 Cytosol 0.438718593023253 0.438718522344653 0.83133734 0 hPsi_site_15852 iPseU_CNN:0.83133734;iRNA_PseU:0 15853 chr6 33553433 33553433 1 + G A UCEC 33553432 + 33553412 33553452 41 AGGACAGCTCATTCAAGCTCTGTGTCCCAGGCATTGTTGCC AGGACAGCTCATTCAAGCTCTATGTCCCAGGCATTGTTGCC < 41bp 0.53206273559559 0.88138301640212 0.42682937 0.4145552 prediction 0.69864056161306 Functional Gain - GGNBP1 ENSG00000204188 CDS Human transcribed_unitary_pseudogene chr6:33553432 chr6:33553433 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22129 0 0 0 0 2 unknown 0.43871552695561 0.438709083464624 0 0 hPsi_site_15853 iPseU_CNN:0;iRNA_PseU:0 15854 chr12 7362738 7362738 1 + G A GBM 7362737 + 7362717 7362757 41 CCTGCGTTTGGCATTGTCTATGTTAGGCCAGAGCGATGCCT CCTGCGTTTGGCATTGTCTATATTAGGCCAGAGCGATGCCT < 41bp 0.526752140681879 0.876070722920422 0.47116086 0.67939705 prediction 0.698637164477086 Functional Gain - PEX5 ENSG00000139197 CDS Human protein_coding chr12:7362737 chr12:7362738 nonsynonymous SNV 0.810 2 22 hPsi_associated_SNPs_22130 0 0 0 0 0 Ribosome 0.438719959756037 0.438718933230809 0.3587941 0 hPsi_site_15854 iPseU_CNN:0.3587941;iRNA_PseU:0 15855 chr3 14965568 14965568 1 + G A UCEC 14965567 + 14965547 14965587 41 TCACCCCGCTTCTCGGGCAGTGCCTTTTCATCCGTCTTCCA TCACCCCGCTTCTCGGGCAGTACCTTTTCATCCGTCTTCCA < 41bp 0.546002875882905 0.895319286706768 0.30896324 0.6546944 prediction 0.698632821647724 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14965567 chr3:14965568 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_22131 0 0 0 0 2 Cytosol 0.438715895997812 0.438718914622482 0.3093888 0 hPsi_site_15855 iPseU_CNN:0.3093888;iRNA_PseU:0 15856 chr20 31671327 31671327 1 + C A PRAD 31671326 + 31671306 31671346 41 CAAATACCGATATGGTGAGATCCTTGAGTCCGAGGGAAGCA CAAATACCGATATGGTGAGATACTTGAGTCCGAGGGAAGCA < 41bp 0.506068731568359 0.855381434460071 0.2653419 0.68921095 prediction 0.698625405783422 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31671326 chr20:31671327 synonymous SNV . 0 22 hPsi_associated_SNPs_22132 0 0 0 0 0 exosome 0.438718645291645 0.438725853834792 0.3784219 0 hPsi_site_15856 iPseU_CNN:0.3784219;iRNA_PseU:0 15857 chr7 53104112 53104112 1 + G A BRCA 53104111 + 53104091 53104131 41 TGGAGCCTCAGTTTTTGTGATGATGCTTGGCCTTCCGTGCT TGGAGCCTCAGTTTTTGTGATAATGCTTGGCCTTCCGTGCT < 41bp 0.517986810786078 0.867293568211946 0.3040967 0.41357872 prediction 0.698613514851735 Functional Gain - POM121L12 ENSG00000221900 CDS Human protein_coding chr7:53104111 chr7:53104112 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22133 0 0 0 0 0 unknown 0.43871417694264 0.432553037971737 0 0 hPsi_site_15857 iPseU_CNN:0;iRNA_PseU:0 15858 chr7 142749665 142749665 1 + G A OV 142749664 + 142749644 142749684 41 CTTGGTAACCATGACTGCAGTGCCCAGGATGCTCTCAGACC CTTGGTAACCATGACTGCAGTACCCAGGATGCTCTCAGACC < 41bp 0.523889292973798 0.873195832611792 0.19180664 0.33979332 prediction 0.698613079275987 Functional Gain - OR6V1 ENSG00000225781 CDS Human protein_coding chr7:142749664 chr7:142749665 synonymous SNV . 0 22 hPsi_associated_SNPs_22134 0 0 0 0 0 unknown 0.438721626464037 0.438719023265256 0 0 hPsi_site_15858 iPseU_CNN:0;iRNA_PseU:0 15859 chr1 10075863 10075863 1 + G A UCEC 10075862 + 10075842 10075882 41 AATGTTCTGTGAAGGTCAAGTGTGCAAACAGACATTCCAGA AATGTTCTGTGAAGGTCAAGTATGCAAACAGACATTCCAGA < 41bp 0.475355037091724 0.849300213879985 0.26479053 0.33389837 prediction 0.69860042775997 Functional Gain - RBP7 ENSG00000162444 CDS Human protein_coding chr1:10075862 chr1:10075863 synonymous SNV . 0 22 hPsi_associated_SNPs_22135 0 0 0 2 1 Ribosome 0.43776688773832 0.439432415852218 0 0 hPsi_site_15859 iPseU_CNN:0;iRNA_PseU:0 15860 chr4 189068275 189068275 1 + G A LUSC 189068274 + 189068254 189068294 41 ATAGGTTTAAAAATCGGAGATGATTACAGCCTCTGGGTCTC ATAGGTTTAAAAATCGGAGATAATTACAGCCTCTGGGTCTC < 41bp 0.533131961397788 0.88242500166665 0.2153705 0.26175183 prediction 0.698586080537725 Functional Gain - TRIML1 ENSG00000184108 CDS Human protein_coding chr4:189068274 chr4:189068275 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_22136 0 0 0 0 0 nucleus 0.438718085230218 0.438716661517542 0 0 hPsi_site_15860 iPseU_CNN:0;iRNA_PseU:0 15861 chr14 105964987 105964987 1 + G A rs113336000 105964986 + 105964966 105965006 41 GGACGGGGGCCAGAGTGGAGTGCCGCGCGGCGGGCCTCTCG GGACGGGGGCCAGAGTGGAGTACCGCGCGGCGGGCCTCTCG < 41bp 0.526025345565832 0.875313301318333 0.26748985 0.4165367 prediction 0.698575911505003 Functional Gain - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105964986 chr14:105964987 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_22137 0 0 1 0 1 Ribosome 0.438607471395326 0.438494441581958 0 0 hPsi_site_15861 iPseU_CNN:0;iRNA_PseU:0 15862 chr8 56436558 56436558 1 + G A SKCM 56436557 + 56436537 56436577 41 GTGTGTACCTGTCTTTCAAGTGAGGCCCACTGCCCCATCCA GTGTGTACCTGTCTTTCAAGTAAGGCCCACTGCCCCATCCA < 41bp 0.521795447536871 0.871079514834876 0.25067824 0.6197633 prediction 0.698568134596011 Functional Gain - XKR4 ENSG00000206579 CDS Human protein_coding chr8:56436557 chr8:56436558 synonymous SNV . 0 22 hPsi_associated_SNPs_22138 0 0 0 0 0 exosome 0.438671532999036 0.43878304106152 0.2395266 0 hPsi_site_15862 iPseU_CNN:0.2395266;iRNA_PseU:0 15863 chr12 122218799 122218799 1 + C T SKCM 122218800 - 122218780 122218820 41 GAAGCTCCGGGCCGCCCAGCTGGAGCCCATCACCTACATGC GAAGCTCCGGGCCGCCCAGCTAGAGCCCATCACCTACATGC < 41bp 0.44850552316299 0.849264031838389 0.29622003 0.5156969 prediction 0.698528063676779 Functional Gain - RHOF ENSG00000139725 CDS Human protein_coding chr12:122218800 chr12:122218799 synonymous SNV . 0 22 hPsi_associated_SNPs_22139 0 0 1 0 1 Ribosome 0.438719229652324 0.438718623918878 0.0313938 0 hPsi_site_15863 iPseU_CNN:0.0313938;iRNA_PseU:0 15864 chr1 158261893 158261893 1 + G A SKCM 158261892 + 158261872 158261912 41 AGATCCCTTTGAAGTACAGGTGAAAGCGGGCTGTGAGCTGC AGATCCCTTTGAAGTACAGGTAAAAGCGGGCTGTGAGCTGC < 41bp 0.527408386337144 0.876666546229202 0.17568588 0.31528682 prediction 0.698516319784116 Functional Gain - CD1C ENSG00000158481 CDS Human protein_coding chr1:158261892 chr1:158261893 synonymous SNV . 0 22 hPsi_associated_SNPs_22140 0 0 0 0 1 exosome 0.43871859301678 0.438718634589446 0 0 hPsi_site_15864 iPseU_CNN:0;iRNA_PseU:0 15865 chr3 132182611 132182611 1 + G A UCEC 132182610 + 132182590 132182630 41 AGGTGCCTTACCTCGACACTTGCATACTGCGATGTTTACAA AGGTGCCTTACCTCGACACTTACATACTGCGATGTTTACAA < 41bp 0.483082485575862 0.849256432831297 0.32993144 0.7006477 prediction 0.698512865662595 Functional Gain - DNAJC13 ENSG00000138246 CDS Human protein_coding chr3:132182610 chr3:132182611 synonymous SNV . 0 22 hPsi_associated_SNPs_22141 0 0 1 0 2 Nucleus 0.438729552870937 0.441072920157713 0.4012954 0 hPsi_site_15865 iPseU_CNN:0.4012954;iRNA_PseU:0 15866 chr11 48328567 48328567 1 + G A COAD 48328566 + 48328546 48328586 41 CGTCCCTCCACCACCCTGGCTGCTGACAAACTTATCATCCT CGTCCCTCCACCACCCTGGCTACTGACAAACTTATCATCCT < 41bp 0.519593344645289 0.868845713535338 0.17276672 0.3316226 prediction 0.698504737780097 Functional Gain - OR4S1 ENSG00000176555 CDS Human protein_coding chr11:48328566 chr11:48328567 nonsynonymous SNV 0.123 0 22 hPsi_associated_SNPs_22142 0 0 0 0 0 unknown 0.438715640753179 0.438714218146356 0 0 hPsi_site_15866 iPseU_CNN:0;iRNA_PseU:0 15867 chr16 633034 633034 1 + G A BLCA 633033 + 633013 633053 41 AGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCC AGAGAGGGGACAAGCAGGACTAAGGGAACTGCTGGCTCGCC < 41bp 0.531213015693244 0.880448388098503 0.2871213 0.36718217 prediction 0.698470744810517 Functional Gain - PIGQ ENSG00000007541 CDS Human protein_coding chr16:633033 chr16:633034 synonymous SNV . 0 22 hPsi_associated_SNPs_22143 0 0 1 0 0 Ribosome 0.438855173331191 0.438718592995101 0 0 hPsi_site_15867 iPseU_CNN:0;iRNA_PseU:0 15868 chr1 12025581 12025581 1 + G A LAML 12025580 + 12025560 12025600 41 CCGGCACACCCTTGGCCATCTGCTCTCCCTAGACAGCTACC CCGGCACACCCTTGGCCATCTACTCTCCCTAGACAGCTACC < 41bp 0.540178275156007 0.889406970959616 0.17900491 0.26776922 prediction 0.698457391607217 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12025580 chr1:12025581 synonymous SNV . 0 22 hPsi_associated_SNPs_22144 0 0 1 0 2 Nucleus 0.438718598109203 0.438718948411176 0 0 hPsi_site_15868 iPseU_CNN:0;iRNA_PseU:0 15869 chr21 45738382 45738382 1 + G A COAD 45738381 + 45738361 45738401 41 GATGGGCATGGAGGCGGTGATGGCGCTGCTGGAAGCCACGC GATGGGCATGGAGGCGGTGATAGCGCTGCTGGAAGCCACGC < 41bp 0.469642032482719 0.849214623363126 0.279421 0.45975745 prediction 0.698429246726253 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45738381 chr21:45738382 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22145 0 0 1 0 2 Ribosome 0.440740567489277 0.438619030158818 0 0 hPsi_site_15869 iPseU_CNN:0;iRNA_PseU:0 15870 chr14 94568867 94568867 1 + G A CESC 94568866 + 94568846 94568886 41 TCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGC TCTAAAGTTATCGGGGGCTTTACTGGGACAGCTCTTGGGGC < 41bp 0.462856056709816 0.849209684397245 0.24745992 0.7095756 prediction 0.698419368794489 Functional Gain - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568866 chr14:94568867 nonsynonymous SNV 0.027 0 22 hPsi_associated_SNPs_22146 0 0 1 0 1 Ribosome 0.438718593206827 0.438718644923172 0.4191512 0 hPsi_site_15870 iPseU_CNN:0.4191512;iRNA_PseU:0 15871 chr2 69409715 69409715 1 + G A SKCM 69409714 + 69409694 69409734 41 AAGATGCCGGAGCAGGAATATGAATTCCCTGAGCCGCGAAA AAGATGCCGGAGCAGGAATATAAATTCCCTGAGCCGCGAAA < 41bp 0.53030733912072 0.879508342228266 0.43382198 0.5535955 prediction 0.698402006215091 Functional Gain - ANTXR1 ENSG00000169604 CDS Human protein_coding chr2:69409714 chr2:69409715 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_22147 0 0 1 0 2 Endoplasmic reticulum 0.438718592995045 0.438718592995102 0.107191 0 hPsi_site_15871 iPseU_CNN:0.107191;iRNA_PseU:0 15872 chr13 33634942 33634942 1 + G A rs531433864 33634941 + 33634921 33634961 41 AAATCCTACTGTGTTGACTTTGCTGCCATCCAGCCCCAGAT AAATCCTACTGTGTTGACTTTACTGCCATCCAGCCCCAGAT < 41bp 0.444249302805 0.849200974056082 0.25479227 0.38142973 prediction 0.698401948112163 Functional Gain - KL ENSG00000133116 CDS Human protein_coding chr13:33634941 chr13:33634942 nonsynonymous SNV 0.355 0 22 hPsi_associated_SNPs_22148 0 0 0 0 0 exosome 0.438736935466756 0.438688535849594 0 0 hPsi_site_15872 iPseU_CNN:0;iRNA_PseU:0 15873 chr17 72368703 72368703 1 + G A SKCM 72368702 + 72368682 72368722 41 CATGGCGGCGAAGCCTGTGATGGAGCCTCCGGGACTCCCCA CATGGCGGCGAAGCCTGTGATAGAGCCTCCGGGACTCCCCA < 41bp 0.529195501149333 0.87839153333086 0.22915399 0.32477438 prediction 0.698392064363054 Functional Gain - GPR142 ENSG00000257008 CDS Human protein_coding chr17:72368702 chr17:72368703 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_22149 0 0 0 0 0 exosome 0.438718620137896 0.438718593565309 0 0 hPsi_site_15873 iPseU_CNN:0;iRNA_PseU:0 15874 chr1 45189897 45189897 1 + G A COAD 45189896 + 45189876 45189916 41 GGTCAAGGAGATCTCCAAACTGCAGGCCAAGATCCTCAGTG GGTCAAGGAGATCTCCAAACTACAGGCCAAGATCCTCAGTG < 41bp 0.455972282432559 0.849193910343072 0.25998074 0.37850094 prediction 0.698387820686143 Functional Gain - C1orf228 ENSG00000198520 CDS Human protein_coding chr1:45189896 chr1:45189897 synonymous SNV . 0 22 hPsi_associated_SNPs_22150 0 0 0 0 1 chromatin 0.438718968762614 0.438718672337005 0 0 hPsi_site_15874 iPseU_CNN:0;iRNA_PseU:0 15875 chr5 140076933 140076933 1 + G A UCEC 140076932 + 140076912 140076952 41 CCAAGGGCCACAAGGTGCCATGTGTGGGACTCAGCATTGGG CCAAGGGCCACAAGGTGCCATATGTGGGACTCAGCATTGGG < 41bp 0.45668847222709 0.849184713843899 0.42686936 0.67296314 prediction 0.698369427687799 Functional Gain - HARS2 ENSG00000112855 CDS Human protein_coding chr5:140076932 chr5:140076933 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_22151 0 0 1 0 1 Cytosol 0.438650855374107 0.438573308192605 0.34592628 0 hPsi_site_15875 iPseU_CNN:0.34592628;iRNA_PseU:0 15876 chr19 17533171 17533171 1 + G A rs34949802 17533170 + 17533150 17533190 41 TGTCCAAGAAGAAACGCATGTGTGTGAAGCTGTTGCCCCTG TGTCCAAGAAGAAACGCATGTATGTGAAGCTGTTGCCCCTG < 41bp 0.544576819620441 0.893760075594408 0.32423896 0.6151883 prediction 0.698366511947933 Functional Gain - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17533170 chr19:17533171 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_22152 0 0 1 0 1 Ribosome 0.438783583590941 0.438538315498064 0.2303766 0 hPsi_site_15876 iPseU_CNN:0.2303766;iRNA_PseU:0 15877 chr12 49721039 49721039 1 + G A CESC 49721038 + 49721018 49721058 41 GAGGTTGTCACTCACTCAGATGAAGGAGGTGTGGCCTCTCT GAGGTTGTCACTCACTCAGATAAAGGAGGTGTGGCCTCTCT < 41bp 0.445671176001456 0.849170828822229 0.33684552 0.60579866 prediction 0.698341657644458 Functional Gain - TROAP ENSG00000135451 CDS Human protein_coding chr12:49721038 chr12:49721039 nonsynonymous SNV 0.837 0 22 hPsi_associated_SNPs_22153 0 0 1 0 1 Ribosome 0.438718563522445 0.43871932358347 0.21159732 0 hPsi_site_15877 iPseU_CNN:0.21159732;iRNA_PseU:0 15878 chr19 47844720 47844720 1 + G A rs138219631 47844719 + 47844699 47844739 41 GCCGTGGCCAGCTGCCACAGTGCCCTCCTGTGCTGGGCAGC GCCGTGGCCAGCTGCCACAGTACCCTCCTGTGCTGGGCAGC < 41bp 0.537263554261699 0.886426142062077 0.3422709 0.6154033 prediction 0.698325175600754 Functional Gain - C5AR2 ENSG00000134830 CDS Human protein_coding chr19:47844719 chr19:47844720 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22154 0 0 0 0 0 exosome 0.438713967267715 0.438718214004545 0.2308066 0 hPsi_site_15878 iPseU_CNN:0.2308066;iRNA_PseU:0 15879 chr18 641487 641487 1 + G A LUAD 641486 + 641466 641506 41 GAGAGGGCAATTTGGCTGGGTGTCTGAACTGGCAAACCAGG GAGAGGGCAATTTGGCTGGGTATCTGAACTGGCAAACCAGG < 41bp 0.531012418382577 0.880174719204201 0.3488125 0.6779422 prediction 0.698324601643249 Functional Gain - CLUL1 ENSG00000079101 CDS Human protein_coding chr18:641486 chr18:641487 synonymous SNV . 0 22 hPsi_associated_SNPs_22155 0 0 0 0 1 cytosol 0.438700145475107 0.438708765556299 0.3558844 0 hPsi_site_15879 iPseU_CNN:0.3558844;iRNA_PseU:0 15880 chr1 229434789 229434789 1 + G A COAD 229434788 + 229434768 229434808 41 GAAGAGGCTTTTGTACAGTGTGCAAGAAAAATACTTAACAA GAAGAGGCTTTTGTACAGTGTACAAGAAAAATACTTAACAA < 41bp 0.461265035355459 0.84915576932211 0.4492209 0.79723716 prediction 0.69831153864422 Functional Gain - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229434788 chr1:229434789 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22156 0 0 1 10 2 Ribosome 0.439938088125178 0.438781647069499 0.59447432 0 hPsi_site_15880 iPseU_CNN:0.59447432;iRNA_PseU:0 15881 chr16 22144284 22144284 1 + C A rs189037151 22144283 + 22144263 22144303 41 GACCTCCAGCTGAACGTGTGTCTCTTCTACGTGGGCGAGCC GACCTCCAGCTGAACGTGTGTATCTTCTACGTGGGCGAGCC < 41bp 0.503879896836348 0.853030480530923 0.26865497 0.42183414 prediction 0.698301167389148 Functional Gain - VWA3A ENSG00000175267 CDS Human protein_coding chr16:22144283 chr16:22144284 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_22157 0 0 0 0 1 Endoplasmic reticulum 0.43870120124787 0.438721443216043 0 0 hPsi_site_15881 iPseU_CNN:0;iRNA_PseU:0 15882 chr3 10318147 10318147 1 + G A LAML 10318146 + 10318126 10318166 41 CTAGAAATCATGAAAAAGTTTGTGCCCCCTGACTACAAGAT CTAGAAATCATGAAAAAGTTTATGCCCCCTGACTACAAGAT < 41bp 0.457202163711523 0.849141220068747 0.29009408 0.41641963 prediction 0.698282440137494 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10318146 chr3:10318147 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22158 0 0 1 0 1 Cytosol 0.438739287809356 0.438718727602414 0 0 hPsi_site_15882 iPseU_CNN:0;iRNA_PseU:0 15883 chr10 101716647 101716647 1 + G A SKCM 101716646 + 101716626 101716666 41 AACAGCTCTACAAAACCTTCTGGAAAAATGCCTCTTCGGCC AACAGCTCTACAAAACCTTCTAGAAAAATGCCTCTTCGGCC < 41bp 0.470033994696108 0.849136474503781 0.15727913 0.21566302 prediction 0.698272949007562 Functional Gain - DNMBP ENSG00000107554 CDS Human protein_coding chr10:101716646 chr10:101716647 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_22159 0 0 0 0 0 Nucleus 0.438686662827811 0.43871859929742 0 0 hPsi_site_15883 iPseU_CNN:0;iRNA_PseU:0 15884 chr12 52629089 52629089 1 + G A SKCM 52629088 + 52629068 52629108 41 CTTGAGGCACTGCAGGTGGATGGGGGCCGCCTGGAGGCGGA CTTGAGGCACTGCAGGTGGATAGGGGCCGCCTGGAGGCGGA < 41bp 0.447750220843193 0.849123092402497 0.27041513 0.6240821 prediction 0.698246184804994 Functional Gain - KRT7 ENSG00000135480 CDS Human protein_coding chr12:52629088 chr12:52629089 nonsynonymous SNV 0.980 1 22 hPsi_associated_SNPs_22160 0 0 0 0 1 Cytosol 0.438723533934143 0.438718298481508 0.2481642 0 hPsi_site_15884 iPseU_CNN:0.2481642;iRNA_PseU:0 15885 chr19 37854273 37854273 1 + G A rs141902493 37854272 + 37854252 37854292 41 CACTCAGGGGAGAAGCCATTTGTATGTGCTGAGTGTGGACG CACTCAGGGGAGAAGCCATTTATATGTGCTGAGTGTGGACG < 41bp 0.524051285740676 0.873170768019294 0.28193408 0.31000012 prediction 0.698238964557235 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854272 chr19:37854273 nonsynonymous SNV 0.916 0 22 hPsi_associated_SNPs_22161 0 0 1 0 0 exosome 0.438718652538912 0.438718783891279 0 0 hPsi_site_15885 iPseU_CNN:0;iRNA_PseU:0 15886 chr8 37697092 37697092 1 + C A UCEC 37697091 + 37697071 37697111 41 CATAGCCATGACCTCTGCTGTCTTTGCGGGGGGCATCACAC CATAGCCATGACCTCTGCTGTATTTGCGGGGGGCATCACAC < 41bp 0.496318085600877 0.849113890580523 0.23553011 0.31699863 prediction 0.698227781161046 Functional Gain - ADGRA2 ENSG00000020181 CDS Human protein_coding chr8:37697091 chr8:37697092 synonymous SNV . 0 22 hPsi_associated_SNPs_22162 0 0 0 0 2 chromatin 0.43871839661999 0.438718679476834 0 0 hPsi_site_15886 iPseU_CNN:0;iRNA_PseU:0 15887 chr17 43246481 43246481 1 + G A HNSC 43246480 + 43246460 43246500 41 ATGGAGAGCCACTCAGAGGATGAAGATCTTGCTGGGGCTGT ATGGAGAGCCACTCAGAGGATAAAGATCTTGCTGGGGCTGT < 41bp 0.466728276320489 0.849109340056819 0.4174105 0.6181489 prediction 0.698218680113637 Functional Gain - HEXIM2 ENSG00000168517 CDS Human protein_coding chr17:43246480 chr17:43246481 nonsynonymous SNV 0.480 1 22 hPsi_associated_SNPs_22163 0 0 0 0 1 chromatin 0.438721763907334 0.438718592744723 0.2362978 0 hPsi_site_15887 iPseU_CNN:0.2362978;iRNA_PseU:0 15888 chr6 33424124 33424124 1 + G A BRCA 33424123 + 33424103 33424143 41 GGCCTTTTGGCTGTGGCATCTGCAACAAGCGCTTCAAGCTG GGCCTTTTGGCTGTGGCATCTACAACAAGCGCTTCAAGCTG < 41bp 0.458403008216405 0.84910217208135 0.35225397 0.6458422 prediction 0.698204344162701 Functional Gain - ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33424123 chr6:33424124 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22164 0 0 0 0 0 chromatin 0.438718566225914 0.43871861585887 0.2916844 0 hPsi_site_15888 iPseU_CNN:0.2916844;iRNA_PseU:0 15889 chr12 52451023 52451023 1 + C A COAD 52451022 + 52451002 52451042 41 GTCGGCCTTCCTGGAGCTCTTCATCCTCCGCCTGGCGTACA GTCGGCCTTCCTGGAGCTCTTAATCCTCCGCCTGGCGTACA < 41bp 0.495255085577731 0.849099360152243 0.31163117 0.63525736 prediction 0.698198720304485 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52451022 chr12:52451023 stopgain 1.000 2 22 hPsi_associated_SNPs_22165 0 0 1 0 2 Endoplasmic reticulum 0.438717688894007 0.438713118845469 0.27051472 0 hPsi_site_15889 iPseU_CNN:0.27051472;iRNA_PseU:0 15890 chr7 129929567 129929567 1 + G A SKCM 129929566 + 129929546 129929586 41 TTGAAGGCAATCATGGAGCATGTGCGAGACCACCCCTATTA TTGAAGGCAATCATGGAGCATATGCGAGACCACCCCTATTA < 41bp 0.463829715096599 0.849098908999839 0.38915455 0.67173004 prediction 0.698197817999677 Functional Gain - CPA2 ENSG00000158516 CDS Human protein_coding chr7:129929566 chr7:129929567 nonsynonymous SNV 0.148 4 22 hPsi_associated_SNPs_22166 0 0 0 0 0 exosome 0.438721173911579 0.438729232135272 0.34346008 0 hPsi_site_15890 iPseU_CNN:0.34346008;iRNA_PseU:0 15891 chr3 136045701 136045701 1 + G A UCEC 136045700 + 136045680 136045720 41 CGTTTTGTCAGATTCTGTGATGCATTCAATATTCCACTCAT CGTTTTGTCAGATTCTGTGATACATTCAATATTCCACTCAT < 41bp 0.531111863292476 0.880209560237021 0.25191528 0.5406525 prediction 0.698195393889089 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:136045700 chr3:136045701 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_22167 0 0 1 0 2 Ribosome 0.438715945092187 0.438706567872515 0.081305 0 hPsi_site_15891 iPseU_CNN:0.081305;iRNA_PseU:0 15892 chr11 5969053 5969053 1 + G A BLCA 5969052 + 5969032 5969072 41 TTTGACCAGAAATGTGCTTATGACTCTGCCCATCCCCATCC TTTGACCAGAAATGTGCTTATAACTCTGCCCATCCCCATCC < 41bp 0.480414053576425 0.849095105693205 0.27015495 0.54589534 prediction 0.69819021138641 Functional Gain - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5969052 chr11:5969053 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22168 0 0 0 0 0 unknown 0.438717856315117 0.438718592947227 0.0917906799999999 0 hPsi_site_15892 iPseU_CNN:0.0917906799999999;iRNA_PseU:0 15893 chr2 232458334 232458334 1 + G A rs182640771 232458333 + 232458313 232458353 41 GGCAATGGGGGCAAATGTGGTGGACAGCTTAGGAGACCTGC GGCAATGGGGGCAAATGTGGTAGACAGCTTAGGAGACCTGC < 41bp 0.466371484656615 0.849092563538679 0.21223488 0.33307827 prediction 0.698185127077357 Functional Gain - TEX44 ENSG00000177673 CDS Human protein_coding chr2:232458333 chr2:232458334 synonymous SNV . 0 22 hPsi_associated_SNPs_22169 0 0 0 0 0 unknown 0.438720497483716 0.438718592994859 0 0 hPsi_site_15893 iPseU_CNN:0;iRNA_PseU:0 15894 chr7 134346544 134346544 1 + G A BRCA 134346543 + 134346523 134346563 41 TGAGCGTCACTATGGGGCCTTGATCGGTCTCAACAGGGAGC TGAGCGTCACTATGGGGCCTTAATCGGTCTCAACAGGGAGC < 41bp 0.451181164086719 0.849092215764532 0.20320895 0.30958807 prediction 0.698184431529064 Functional Gain - BPGM ENSG00000172331 CDS Human protein_coding chr7:134346543 chr7:134346544 synonymous SNV . 0 22 hPsi_associated_SNPs_22170 0 0 1 0 0 Ribosome 0.438718592885984 0.438718592995094 0 0 hPsi_site_15894 iPseU_CNN:0;iRNA_PseU:0 15895 chr11 1467115 1467115 1 + G A BLCA 1467114 + 1467094 1467134 41 GTGCCTGCGCGGCGGGCCATTGAGATGGCCCAGCACGGCCA GTGCCTGCGCGGCGGGCCATTAAGATGGCCCAGCACGGCCA < 41bp 0.527869125815907 0.876960313735366 0.39647114 0.5455874 prediction 0.698182375838918 Functional Gain - BRSK2 ENSG00000174672 CDS Human protein_coding chr11:1467114 chr11:1467115 nonsynonymous SNV 0.963 0 22 hPsi_associated_SNPs_22171 0 0 0 0 1 exosome 0.438718488854464 0.438832097199606 0.0911747999999999 0 hPsi_site_15895 iPseU_CNN:0.0911747999999999;iRNA_PseU:0 15896 chr10 25314125 25314125 1 + G A PRAD 25314124 + 25314104 25314144 41 ATAGGGTGCAAGACAAAACTTGCCCTGTGATTATCTCATCT ATAGGGTGCAAGACAAAACTTACCCTGTGATTATCTCATCT < 41bp 0.474472965431149 0.849086587900149 0.20814845 0.23062518 prediction 0.698173175800298 Functional Gain - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25314124 chr10:25314125 nonsynonymous SNV 0.920 3 22 hPsi_associated_SNPs_22172 0 0 0 0 0 Cytosol 0.438953147865243 0.437853950329828 0 0 hPsi_site_15896 iPseU_CNN:0;iRNA_PseU:0 15897 chrX 44703532 44703532 1 + G A UCEC 44703531 + 44703511 44703551 41 AGCAATCGCATCACCGCCATTGTCAATGCCTCGGTGGAAGT AGCAATCGCATCACCGCCATTATCAATGCCTCGGTGGAAGT < 41bp 0.467751566467934 0.849081802938431 0.2301727 0.2736811 prediction 0.698163605876862 Functional Gain - DUSP21 ENSG00000189037 CDS Human protein_coding chrX:44703531 chrX:44703532 nonsynonymous SNV 0.064 0 22 hPsi_associated_SNPs_22173 0 0 0 0 0 exosome 0.451541215297833 0.441260864566935 0 0 hPsi_site_15897 iPseU_CNN:0;iRNA_PseU:0 15898 chr3 49211740 49211740 1 + G A BLCA 49211739 + 49211719 49211759 41 CAGGCCCAGGTACGTGTGTATGAGCCCCGTCGGGACTGCTG CAGGCCCAGGTACGTGTGTATAAGCCCCGTCGGGACTGCTG < 41bp 0.450173977500229 0.849076754302806 0.70462483 0.9450386 prediction 0.698153508605612 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49211739 chr3:49211740 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22174 0 0 1 0 1 Cytosol 0.43871859299512 0.438718592445708 0.48082754 0 hPsi_site_15898 iPseU_CNN:0.48082754;iRNA_PseU:0 15899 chr19 10367426 10367426 1 + G A CESC 10367425 + 10367405 10367445 41 AGAGCCGAGGTGCGGGGCGGTGGCCGGAAGCCTTGGCCGCA AGAGCCGAGGTGCGGGGCGGTAGCCGGAAGCCTTGGCCGCA < 41bp 0.445714705885129 0.849072977650848 0.18437764 0.83420444 prediction 0.698145955301696 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10367425 chr19:10367426 nonsynonymous SNV 0.710 3 22 hPsi_associated_SNPs_22175 0 0 1 0 2 Cytosol 0.438718593375299 0.438718593280862 0.66840888 0 hPsi_site_15899 iPseU_CNN:0.66840888;iRNA_PseU:0 15900 chr16 10850575 10850575 1 + C A BLCA 10850574 + 10850554 10850594 41 AAGACAACCTGGGGGTGATGTCAGTGGGCTTCCTGCTCAGC AAGACAACCTGGGGGTGATGTAAGTGGGCTTCCTGCTCAGC < 41bp 0.509056951991022 0.858128569612902 0.30249092 0.7395001 prediction 0.69814323524376 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10850574 chr16:10850575 stopgain 0.970 1 22 hPsi_associated_SNPs_22176 0 0 1 0 2 Ribosome 0.438726466050384 0.441451470345121 0.4790002 0 hPsi_site_15900 iPseU_CNN:0.4790002;iRNA_PseU:0 15901 chr7 142750037 142750037 1 + G A SKCM 142750036 + 142750016 142750056 41 GGAATTCTGGGACTTTCTGATGGCCTTGACCTTTGTCCTCA GGAATTCTGGGACTTTCTGATAGCCTTGACCTTTGTCCTCA < 41bp 0.519620645231203 0.868677508696735 0.20908743 0.34206563 prediction 0.698113726931064 Functional Gain - OR6V1 ENSG00000225781 CDS Human protein_coding chr7:142750036 chr7:142750037 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_22177 0 0 0 0 0 unknown 0.43871859299438 0.438718593008155 0 0 hPsi_site_15901 iPseU_CNN:0;iRNA_PseU:0 15902 chr2 27746156 27746156 1 + G A BLCA 27746155 + 27746135 27746175 41 GGTGATACCCATCGCCTTGCTGAGCCTCCTATTCCGGTGCT GGTGATACCCATCGCCTTGCTAAGCCTCCTATTCCGGTGCT < 41bp 0.528481480104832 0.877532424871297 0.24806604 0.39016724 prediction 0.69810188953293 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27746155 chr2:27746156 synonymous SNV . 0 22 hPsi_associated_SNPs_22178 0 0 0 0 1 cytosol 0.438718602572343 0.438718592945261 0 0 hPsi_site_15902 iPseU_CNN:0;iRNA_PseU:0 15903 chr11 63764545 63764545 1 + G A BLCA 63764544 + 63764524 63764564 41 CATGGACCTGATTGAGCAGGTGGAGAAGCAGACCTCTGTCG CATGGACCTGATTGAGCAGGTAGAGAAGCAGACCTCTGTCG < 41bp 0.443199477842474 0.849046867065612 0.30475676 0.536973 prediction 0.698093734131225 Functional Gain - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63764544 chr11:63764545 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22179 0 0 1 0 1 Ribosome 0.438843591591441 0.438754669841989 0.0739460000000001 0 hPsi_site_15903 iPseU_CNN:0.0739460000000001;iRNA_PseU:0 15904 chr12 58018343 58018343 1 + G A COAD 58018342 + 58018322 58018362 41 AGTGTGGATTTGGGCCTGGCTGTGGGTGTGGTCTTCTCCAT AGTGTGGATTTGGGCCTGGCTATGGGTGTGGTCTTCTCCAT < 41bp 0.46374736717389 0.849044621033689 0.33532447 0.6206917 prediction 0.698089242067378 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58018342 chr12:58018343 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22180 0 0 1 1 2 chromatin 0.438720459612394 0.438718594546067 0.2413834 0 hPsi_site_15904 iPseU_CNN:0.2413834;iRNA_PseU:0 15905 chr4 6621722 6621722 1 + G A rs78413540 6621721 + 6621701 6621741 41 GCTCACAGGGACCTGGGATTTGAGCATGCTGCACCGCTGGA GCTCACAGGGACCTGGGATTTAAGCATGCTGCACCGCTGGA < 41bp 0.516240413883034 0.865283862351662 0.31486082 0.42098927 prediction 0.698086896937256 Functional Gain - MAN2B2 ENSG00000013288 CDS Human protein_coding chr4:6621721 chr4:6621722 synonymous SNV . 0 22 hPsi_associated_SNPs_22181 0 0 1 0 2 Endoplasmic reticulum 0.438718434741319 0.43877704916786 0 0 hPsi_site_15905 iPseU_CNN:0;iRNA_PseU:0 15906 chr16 3170269 3170269 1 + G A KIRC 3170268 + 3170248 3170288 41 GCCCAAGGCCCTGGCCATGCTGATGCTGGGGGCGGCGGCGG GCCCAAGGCCCTGGCCATGCTAATGCTGGGGGCGGCGGCGG < 41bp 0.487368563801955 0.849042529072023 0.17728314 0.2653903 prediction 0.698085058144047 Functional Gain - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3170268 chr16:3170269 synonymous SNV . 0 22 hPsi_associated_SNPs_22182 0 0 0 0 0 chromatin 0.4387185929951 0.438718593065419 0 0 hPsi_site_15906 iPseU_CNN:0;iRNA_PseU:0 15907 chr3 160968681 160968681 1 + G A CESC 160968680 + 160968660 160968700 41 GATGCCACTGGTGAAGAAGGTGCATCAATGCTGACATAATG GATGCCACTGGTGAAGAAGGTACATCAATGCTGACATAATG < 41bp 0.524120278346679 0.873160185008838 0.30961585 0.86104536 prediction 0.698079813324318 Functional Gain - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160968680 chr3:160968681 nonsynonymous SNV 0.735 3 22 hPsi_associated_SNPs_22183 0 0 1 0 0 Nucleus 0.438478367817692 0.41368280169722 0.72209072 0 hPsi_site_15907 iPseU_CNN:0.72209072;iRNA_PseU:0 15908 chr17 39406184 39406184 1 + G A PRAD 39406183 + 39406163 39406203 41 CCACCTGTGTGACCAGCTGCTGCCAGCCTTCCTGCTGCAGC CCACCTGTGTGACCAGCTGCTACCAGCCTTCCTGCTGCAGC < 41bp 0.531382502025502 0.880422028701526 0.2545641 0.5398937 prediction 0.69807905335205 Functional Gain - KRTAP9-4 ENSG00000241595 CDS Human protein_coding chr17:39406183 chr17:39406184 nonsynonymous SNV 0.054 2 22 hPsi_associated_SNPs_22184 0 0 0 0 0 unknown 0.4382504717003 0.439300109388443 0.0797874000000001 0 hPsi_site_15908 iPseU_CNN:0.0797874000000001;iRNA_PseU:0 15909 chr1 161697408 161697408 1 + G A LIHC 161697407 + 161697387 161697427 41 GAGACCCCCACCTCTCACTTTGCTGTGAGCCCGGGAACCCC GAGACCCCCACCTCTCACTTTACTGTGAGCCCGGGAACCCC < 41bp 0.530177278285809 0.879216365359564 0.2759626 0.69344956 prediction 0.69807817414751 Functional Gain - FCRLB ENSG00000162746 CDS Human protein_coding chr1:161697407 chr1:161697408 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_22185 0 0 1 1 0 Endoplasmic reticulum 0.438718593149607 0.438718592609379 0.38689912 0 hPsi_site_15909 iPseU_CNN:0.38689912;iRNA_PseU:0 15910 chr4 71555475 71555475 1 + G A GBM 71555474 + 71555454 71555494 41 ACTTCTGCTGCTGCCTGTGCTGTTACAGATCTTTCTGATGA ACTTCTGCTGCTGCCTGTGCTATTACAGATCTTTCTGATGA < 41bp 0.483028818342188 0.849032737052746 0.24358395 0.34855062 prediction 0.698065474105492 Functional Gain - UTP3 ENSG00000132467 CDS Human protein_coding chr4:71555474 chr4:71555475 nonsynonymous SNV 0.877 0 22 hPsi_associated_SNPs_22186 0 0 1 0 0 Cytosol 0.4387170769716 0.438697191739303 0 0 hPsi_site_15910 iPseU_CNN:0;iRNA_PseU:0 15911 chr8 99168550 99168550 1 + G A STAD 99168549 + 99168529 99168569 41 AGGAGGTAATGGATGCAGGGTGTCAAGAATCGGCAGGGCCT AGGAGGTAATGGATGCAGGGTATCAAGAATCGGCAGGGCCT < 41bp 0.535606623816763 0.884629923564378 0.23149219 0.62771857 prediction 0.69804659949523 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99168549 chr8:99168550 nonsynonymous SNV 0.025 1 22 hPsi_associated_SNPs_22187 0 0 1 0 1 Mitochondrion 0.438716734698957 0.438718784026175 0.25543714 0 hPsi_site_15911 iPseU_CNN:0.25543714;iRNA_PseU:0 15912 chr12 55714722 55714722 1 + G A SKCM 55714721 + 55714701 55714741 41 AGTCACAGAGTTTTACCTTCTGGCTGCCATGTCCTATGACC AGTCACAGAGTTTTACCTTCTAGCTGCCATGTCCTATGACC < 41bp 0.478654122915456 0.849009858563557 0.25669727 0.3745285 prediction 0.698019717127115 Functional Gain - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55714721 chr12:55714722 synonymous SNV . 0 22 hPsi_associated_SNPs_22188 0 0 0 0 0 unknown 0.43871936066316 0.438707005751489 0 0 hPsi_site_15912 iPseU_CNN:0;iRNA_PseU:0 15913 chr8 24771904 24771904 1 + G A UCEC 24771903 + 24771883 24771923 41 GCGCGGTTGCGCGACGACACTGAGGCGGCCATCCGCGCGCT GCGCGGTTGCGCGACGACACTAAGGCGGCCATCCGCGCGCT < 41bp 0.53598993712009 0.884997364321853 0.4827672 0.66482025 prediction 0.698014854403526 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24771903 chr8:24771904 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_22189 0 0 1 0 0 exosome 0.438808778870158 0.438718592899858 0.3296405 0 hPsi_site_15913 iPseU_CNN:0.3296405;iRNA_PseU:0 15914 chr19 30313189 30313189 1 + C A LUSC 30313188 + 30313168 30313208 41 GATGTTGACTGCCTTGAATTTCCTTATGGTATACTTGCTGC GATGTTGACTGCCTTGAATTTACTTATGGTATACTTGCTGC < 41bp 0.492744028829604 0.849002177477907 0.20799395 0.3170758 prediction 0.698004354955814 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313188 chr19:30313189 nonsynonymous SNV 0.073 0 22 hPsi_associated_SNPs_22190 0 0 0 0 2 Ribosome 0.438718594241378 0.43864881630638 0 0 hPsi_site_15914 iPseU_CNN:0;iRNA_PseU:0 15915 chr17 76496429 76496429 1 + G A STAD 76496428 + 76496408 76496448 41 GCAGTTGAAGACGTAGACCATGGTGCCCAGGGCTCTGCCCA GCAGTTGAAGACGTAGACCATAGTGCCCAGGGCTCTGCCCA < 41bp 0.466155397436399 0.849001217278944 0.16691408 0.23066908 prediction 0.698002434557888 Functional Gain - DNAH17 ENSG00000187775;ENSG00000268470 CDS Human other chr17:76496428 chr17:76496429 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22191 0 0 0 0 0 chromatin 0.438719214895808 0.438718580294176 0 0 hPsi_site_15915 iPseU_CNN:0;iRNA_PseU:0 15916 chr17 75398478 75398478 1 + G A COAD 75398477 + 75398457 75398497 41 GCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAAC GCTCAAGAGGGCCGAGGTGTTAGGCCACAAGACGCCAGAAC < 41bp 0.461595983748697 0.84899960482896 0.2850917 0.5093657 prediction 0.69799920965792 Functional Gain - SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398477 chr17:75398478 synonymous SNV . 0 22 hPsi_associated_SNPs_22192 0 0 1 0 0 Ribosome 0.437983668351387 0.440278407672733 0.0187314000000001 0 hPsi_site_15916 iPseU_CNN:0.0187314000000001;iRNA_PseU:0 15917 chr20 31606488 31606488 1 + G A STAD 31606487 + 31606467 31606507 41 CCCATCATCCTGCCCACGGATGCCACCCCTTTTGTGTTGCC CCCATCATCCTGCCCACGGATACCACCCCTTTTGTGTTGCC < 41bp 0.540058081915652 0.889057205924263 0.18902165 0.40047827 prediction 0.697998248017222 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31606487 chr20:31606488 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_22193 0 0 0 0 1 cytosol 0.438719263782509 0.438718594156537 0 0 hPsi_site_15917 iPseU_CNN:0;iRNA_PseU:0 15918 chr20 21687033 21687033 1 + G A rs142053179 21687032 + 21687012 21687052 41 CCCTTGGCTAACCCGCCGGGTGTTTTCTCCCCCTCCGGCTC CCCTTGGCTAACCCGCCGGGTATTTTCTCCCCCTCCGGCTC < 41bp 0.455690687338223 0.848998313244114 0.34683424 0.75144875 prediction 0.697996626488229 Functional Gain - PAX1 ENSG00000125813 CDS Human protein_coding chr20:21687032 chr20:21687033 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_22194 0 0 0 0 0 unknown 0.438727669247759 0.438715823379518 0.5028975 0 hPsi_site_15918 iPseU_CNN:0.5028975;iRNA_PseU:0 15919 chr22 24717686 24717686 1 + G A PRAD 24717685 + 24717665 24717705 41 GGAGTCCACTTTATTGCAGTTGCAGGAACAGAATACTGCCA GGAGTCCACTTTATTGCAGTTACAGGAACAGAATACTGCCA < 41bp 0.535398880622116 0.884393879668732 0.21846524 0.40167424 prediction 0.697989998093232 Functional Gain - SPECC1L ENSG00000100014;ENSG00000258555 CDS Human other chr22:24717685 chr22:24717686 synonymous SNV . 0 22 hPsi_associated_SNPs_22195 0 0 1 0 0 Cytosol 0.43871689147457 0.438718716586854 0 0 hPsi_site_15919 iPseU_CNN:0;iRNA_PseU:0 15920 chr11 71249601 71249601 1 + G A UCEC 71249600 + 71249580 71249620 41 CATCCTGCTGCCAGTCCAGCTGCTGCAAGCCCTGCTGTTCC CATCCTGCTGCCAGTCCAGCTACTGCAAGCCCTGCTGTTCC < 41bp 0.517096306054304 0.866089302923758 0.20359701 0.54900914 prediction 0.697985993738906 Functional Gain - KRTAP5-8 ENSG00000241233 CDS Human protein_coding chr11:71249600 chr11:71249601 nonsynonymous SNV 0.929 2 22 hPsi_associated_SNPs_22196 0 0 0 0 0 unknown 0.438709090346855 0.438589670609363 0.09801828 0 hPsi_site_15920 iPseU_CNN:0.09801828;iRNA_PseU:0 15921 chr14 24028467 24028467 1 + G A rs143933530 24028466 + 24028446 24028486 41 CAGCAGGGATTTCCCTGCCTTGGGATGTGGGAAACAGAAGA CAGCAGGGATTTCCCTGCCTTAGGATGTGGGAAACAGAAGA < 41bp 0.509559699093201 0.858548353977873 0.23640737 0.3040257 prediction 0.697977309769343 Functional Gain - THTPA ENSG00000157306 ncRNA_exonic Human processed_transcript chr14:24028466 chr14:24028467 . . 0 22 hPsi_associated_SNPs_22197 0 0 1 0 0 Cytosol 0.438718591338329 0.43871859166366 0 0 hPsi_site_15921 iPseU_CNN:0;iRNA_PseU:0 15922 chr8 21856683 21856683 1 + C A LUSC 21856682 + 21856662 21856702 41 AGGGCATCTCCATCTGCTTCTCCATGCTGAAGGCTGCTCTC AGGGCATCTCCATCTGCTTCTACATGCTGAAGGCTGCTCTC < 41bp 0.497472996816071 0.848983467240532 0.15695429 0.16857952 prediction 0.697966934481064 Functional Gain - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21856682 chr8:21856683 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22198 0 0 1 0 1 Cytosol 0.43871856959765 0.438703459643103 0 0 hPsi_site_15922 iPseU_CNN:0;iRNA_PseU:0 15923 chr6 43266262 43266262 1 + G A LUAD 43266261 + 43266241 43266281 41 TGTGCCCTGCCGGGTGCCCCTGCCAACTTCAGCCATCAGGA TGTGCCCTGCCGGGTGCCCCTACCAACTTCAGCCATCAGGA < 41bp 0.474945156838989 0.848976535439299 0.2884364 0.41328773 prediction 0.697953070878598 Functional Gain - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43266261 chr6:43266262 nonsynonymous SNV 0.919 0 22 hPsi_associated_SNPs_22199 0 0 0 0 0 cytosol 0.438714683744675 0.438728237995149 0 0 hPsi_site_15923 iPseU_CNN:0;iRNA_PseU:0 15924 chr22 30416630 30416630 1 + G A TGCT 30416629 + 30416609 30416649 41 GAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGC GAACTTGCACCACAAGTGGCTACATAGCCACTCAGGAAGGC < 41bp 0.44804354086592 0.848965774741192 0.31569958 0.7234159 prediction 0.697931549482385 Functional Gain - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416629 chr22:30416630 synonymous SNV . 0 22 hPsi_associated_SNPs_22200 0 0 1 0 0 Ribosome 0.437263941760213 0.438606495278879 0.4468318 0 hPsi_site_15924 iPseU_CNN:0.4468318;iRNA_PseU:0 15925 chr1 248039294 248039294 1 + G A rs1339847 248039293 + 248039273 248039313 41 GATGGAGAACCATGGAGGGATGTCCCCAACAACCCTGAGCG GATGGAGAACCATGGAGGGATATCCCCAACAACCCTGAGCG < 41bp 0.533881349862241 0.8828346068391 0.64767706 0.77861965 prediction 0.69790651395372 Functional Gain - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248039293 chr1:248039294 nonsynonymous SNV 0.063 0 22 hPsi_associated_SNPs_22201 0 1 0 0 2 Cytosol 0.438716023734885 0.438727082941031 0.26188518 0 hPsi_site_15925 iPseU_CNN:0.26188518;iRNA_PseU:0 15926 chr19 15807754 15807754 1 + G A SKCM 15807753 + 15807733 15807773 41 GGCGTTCGCCATGGCGGAGATGAAAGTGGTCCTGGCGTTGA GGCGTTCGCCATGGCGGAGATAAAAGTGGTCCTGGCGTTGA < 41bp 0.534457315996179 0.883405333051513 0.19956157 0.28704762 prediction 0.697896034110669 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807753 chr19:15807754 nonsynonymous SNV 0.428 0 22 hPsi_associated_SNPs_22202 0 0 1 0 1 exosome 0.438718596096092 0.43871860703856 0 0 hPsi_site_15926 iPseU_CNN:0;iRNA_PseU:0 15927 chr6 13977623 13977623 1 + G A rs144985032 13977622 + 13977602 13977642 41 CAACAACATCCTTGTAAACTTGACTTGTGGAGGCAAAGGGA CAACAACATCCTTGTAAACTTAACTTGTGGAGGCAAAGGGA < 41bp 0.460335010331011 0.848947505476792 0.28710252 0.46378067 prediction 0.697895010953584 Functional Gain - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977622 chr6:13977623 synonymous SNV . 0 22 hPsi_associated_SNPs_22203 0 0 1 0 0 chromatin 0.438721638044327 0.43891226297431 0 0 hPsi_site_15927 iPseU_CNN:0;iRNA_PseU:0 15928 chr19 40875880 40875880 1 + G A UCEC 40875879 + 40875859 40875899 41 CGTGAACGTCCGCATCGCTGTGAGCAAGCCCAGCGGGCCCC CGTGAACGTCCGCATCGCTGTAAGCAAGCCCAGCGGGCCCC < 41bp 0.446273858597945 0.848946023586373 0.22334948 0.64829606 prediction 0.697892047172745 Functional Gain - PLD3 ENSG00000105223 CDS Human protein_coding chr19:40875879 chr19:40875880 synonymous SNV . 0 22 hPsi_associated_SNPs_22204 0 0 1 0 1 Endoplasmic reticulum 0.438718673740268 0.438714328458536 0.29659212 0 hPsi_site_15928 iPseU_CNN:0.29659212;iRNA_PseU:0 15929 chrX 70322388 70322388 1 + G A rs147716329 70322387 + 70322367 70322407 41 GTGGCCCCTTAGGCCAGTGATGTGCGGTGGGTGGGCTGTTT GTGGCCCCTTAGGCCAGTGATATGCGGTGGGTGGGCTGTTT < 41bp 0.461518772004064 0.848942564028495 0.23172933 0.24849102 prediction 0.69788512805699 Functional Gain - FOXO4 ENSG00000184481 UTR3 Human protein_coding chrX:70322387 chrX:70322388 . . 0 22 hPsi_associated_SNPs_22205 0 0 0 0 0 Cytosol 0.438718592579442 0.438718592869341 0 0 hPsi_site_15929 iPseU_CNN:0;iRNA_PseU:0 15930 chr1 47614296 47614296 1 + G A ESCA 47614295 + 47614275 47614315 41 AACTGCATCGGGAAACAATTTGCCATGAACCAGCTGAAGGT AACTGCATCGGGAAACAATTTACCATGAACCAGCTGAAGGT < 41bp 0.475456769305275 0.848940706352734 0.36398765 0.5474223 prediction 0.697881412705468 Functional Gain - CYP4A22 ENSG00000162365 CDS Human protein_coding chr1:47614295 chr1:47614296 nonsynonymous SNV 0.960 3 22 hPsi_associated_SNPs_22206 0 0 0 0 1 exosome 0.438718611222785 0.438719537380117 0.0948446000000001 0 hPsi_site_15930 iPseU_CNN:0.0948446000000001;iRNA_PseU:0 15931 chr19 41245469 41245469 1 + G A rs200330367 41245468 + 41245448 41245488 41 GGGCTGGCACAGAGCTGAGCTGCTCAGCCACCATCAGGTTA GGGCTGGCACAGAGCTGAGCTACTCAGCCACCATCAGGTTA < 41bp 0.509654665628354 0.85858785855298 0.35393876 0.70106983 prediction 0.697866385849252 Functional Gain - ITPKC ENSG00000086544 UTR3 Human protein_coding chr19:41245468 chr19:41245469 . . 0 22 hPsi_associated_SNPs_22207 0 0 0 0 0 Cytosol 0.438658555503622 0.438478519453428 0.40213966 0 hPsi_site_15931 iPseU_CNN:0.40213966;iRNA_PseU:0 15932 chr14 69813851 69813851 1 + G A SKCM 69813850 + 69813830 69813870 41 ACAGCTGGTGACTTCCTGCTTGGAATGGGGATCTGCAGAGG ACAGCTGGTGACTTCCTGCTTAGAATGGGGATCTGCAGAGG < 41bp 0.446169708744155 0.848924079119621 0.2973631 0.35919112 prediction 0.697848158239241 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69813850 chr14:69813851 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22208 0 0 1 0 1 chromatin 0.438722075894676 0.439412245708385 0 0 hPsi_site_15932 iPseU_CNN:0;iRNA_PseU:0 15933 chr20 30818669 30818669 1 + C A STAD 30818668 + 30818648 30818688 41 CGGGACTGCAGGCTCGCACTTCATGGCCTCTCCGCAGTGTG CGGGACTGCAGGCTCGCACTTAATGGCCTCTCCGCAGTGTG < 41bp 0.504696129546339 0.853619512314727 0.319455 0.52155346 prediction 0.697846765536776 Functional Gain - POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30818668 chr20:30818669 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_22209 0 0 1 0 1 Endoplasmic reticulum 0.439539352494783 0.438718266391358 0.04310692 0 hPsi_site_15933 iPseU_CNN:0.04310692;iRNA_PseU:0 15934 chr9 125486687 125486687 1 + G A SKCM 125486686 + 125486666 125486706 41 ATGATGTGGTTATGAAACCATGGCATTGCCTACTCATGCTA ATGATGTGGTTATGAAACCATAGCATTGCCTACTCATGCTA < 41bp 0.477789606247339 0.848918735256382 0.20894277 0.23749399 prediction 0.697837470512763 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125486686 chr9:125486687 stopgain 0.000 0 22 hPsi_associated_SNPs_22210 0 0 0 0 0 unknown 0.438976651546955 0.437591895262341 0 0 hPsi_site_15934 iPseU_CNN:0;iRNA_PseU:0 15935 chr3 155633862 155633862 1 + G A OV 155633861 + 155633841 155633881 41 AAACCAGAGGAGGTTTTCCTTGCCCAAGGTACTTTACGGCC AAACCAGAGGAGGTTTTCCTTACCCAAGGTACTTTACGGCC < 41bp 0.543566283333044 0.892482802431063 0.22683373 0.49191883 prediction 0.697833038196037 Functional Gain - GMPS ENSG00000163655 CDS Human protein_coding chr3:155633861 chr3:155633862 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22211 0 0 1 0 1 Nucleus 0.438718592995102 0.438718592995102 0 0 hPsi_site_15935 iPseU_CNN:0;iRNA_PseU:0 15936 chr13 31195310 31195310 1 + G A BRCA 31195309 + 31195289 31195329 41 TCCGAAGATTGGAAATGGTTTGCCAGTGATTGGACCAGGGA TCCGAAGATTGGAAATGGTTTACCAGTGATTGGACCAGGGA < 41bp 0.513714302162987 0.862627102112376 0.2085644 0.2327753 prediction 0.697825599898779 Functional Gain - USPL1 ENSG00000132952 CDS Human protein_coding chr13:31195309 chr13:31195310 synonymous SNV . 0 22 hPsi_associated_SNPs_22212 0 0 1 0 1 Cytosol 0.438718592808209 0.438718592995019 0 0 hPsi_site_15936 iPseU_CNN:0;iRNA_PseU:0 15937 chr2 120020691 120020691 1 + G A BLCA 120020690 + 120020670 120020710 41 TGCACACGCTCACCTACGGCTGGACCCGCGCCTTCGAGGAG TGCACACGCTCACCTACGGCTAGACCCGCGCCTTCGAGGAG < 41bp 0.532059079961739 0.88095551658212 0.32527012 0.8828764 prediction 0.697792873240762 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120020690 chr2:120020691 stopgain 1.000 1 22 hPsi_associated_SNPs_22213 0 0 1 0 1 Ribosome 0.43866992869466 0.438750139188139 0.7657528 0 hPsi_site_15937 iPseU_CNN:0.7657528;iRNA_PseU:0 15938 chrX 11776438 11776438 1 + G A COAD 11776437 + 11776417 11776457 41 ACTCAGGGGAGAAAGTGCTGTGCTTCGAGCCTGACCCCACC ACTCAGGGGAGAAAGTGCTGTACTTCGAGCCTGACCCCACC < 41bp 0.531105756135717 0.879994897797898 0.3686158 0.843328 prediction 0.697778283324363 Functional Gain - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11776437 chrX:11776438 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_22214 0 0 1 0 1 Cytosol 0.43871829339933 0.438718283611877 0.686656 0 hPsi_site_15938 iPseU_CNN:0.686656;iRNA_PseU:0 15939 chr9 35680817 35680817 1 + G A rs139323293 35680816 + 35680796 35680836 41 CGTCGCGTTCCTTGTGCAGATGAGAAGGCAGCACAGGTATT CGTCGCGTTCCTTGTGCAGATAAGAAGGCAGCACAGGTATT < 41bp 0.463247040239191 0.848886279862501 0.18259606 0.2548737 prediction 0.697772559725003 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35680816 chr9:35680817 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_22215 0 0 0 0 2 Endoplasmic reticulum 0.438655575721767 0.437392626813495 0 0 hPsi_site_15939 iPseU_CNN:0;iRNA_PseU:0 15940 chr1 175097249 175097249 1 + G A BRCA 175097248 + 175097228 175097268 41 ACCTACCCTGTCTCCCTTGTTGCCTTTAAGGGTGGTCGCCG ACCTACCCTGTCTCCCTTGTTACCTTTAAGGGTGGTCGCCG < 41bp 0.440401931722884 0.848883393355746 0.2061764 0.3689955 prediction 0.697766786711493 Functional Gain - TNN ENSG00000120332 CDS Human protein_coding chr1:175097248 chr1:175097249 nonsynonymous SNV 0.928 4 22 hPsi_associated_SNPs_22216 0 0 0 0 2 exosome 0.438718537455912 0.438718444448934 0 0 hPsi_site_15940 iPseU_CNN:0;iRNA_PseU:0 15941 chr15 45962150 45962150 1 + G A LUSC 45962149 + 45962129 45962169 41 TCCTACCGATATCTTATTATTGCTCTCGGAATCCAGCTGGA TCCTACCGATATCTTATTATTACTCTCGGAATCCAGCTGGA < 41bp 0.542506811634864 0.891348710024854 0.27545625 0.3369683 prediction 0.69768379677998 Functional Gain - SQOR ENSG00000137767;ENSG00000260170 CDS Human other chr15:45962149 chr15:45962150 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22217 0 0 0 0 2 unknown 0.438721872429403 0.438716757060009 0 0 hPsi_site_15941 iPseU_CNN:0;iRNA_PseU:0 15942 chr10 50860015 50860015 1 + G A LGG 50860014 + 50859994 50860034 41 AAGCAGAAATGCAGCCCTGATGCCTTCATCCAGGTGGCCCT AAGCAGAAATGCAGCCCTGATACCTTCATCCAGGTGGCCCT < 41bp 0.538469843521136 0.887308004018227 0.25168547 0.53082776 prediction 0.697676320994183 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50860014 chr10:50860015 nonsynonymous SNV 0.974 3 22 hPsi_associated_SNPs_22218 0 0 0 0 2 unknown 0.438724913124196 0.438719426704703 0.06165552 0 hPsi_site_15942 iPseU_CNN:0.06165552;iRNA_PseU:0 15943 chr16 1877711 1877711 1 + G A CESC 1877710 + 1877690 1877730 41 GGCGAACTCAGACAGGAGGGTGAGACATCCTCCATGATTTT GGCGAACTCAGACAGGAGGGTAAGACATCCTCCATGATTTT < 41bp 0.467509060443429 0.848833882561238 0.2774338 0.86123884 prediction 0.697667765122475 Functional Gain - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877710 chr16:1877711 nonsynonymous SNV 0.976 1 22 hPsi_associated_SNPs_22219 0 0 0 0 0 Ribosome 0.438718593041496 0.438718592995102 0.72247768 0 hPsi_site_15943 iPseU_CNN:0.72247768;iRNA_PseU:0 15944 chr20 57769631 57769631 1 + G A UCEC 57769630 + 57769610 57769650 41 CTGAGCCGCGGCTCACGTGGTGTTGCCTGAGCCGCAGTGTC CTGAGCCGCGGCTCACGTGGTATTGCCTGAGCCGCAGTGTC < 41bp 0.459809079301468 0.848825359409907 0.48847747 0.86743885 prediction 0.697650718819815 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57769630 chr20:57769631 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_22220 0 0 0 0 0 exosome 0.438735056659088 0.438747130643468 0.7348777 0 hPsi_site_15944 iPseU_CNN:0.7348777;iRNA_PseU:0 15945 chr9 134386798 134386798 1 + C A GBM 134386797 + 134386777 134386817 41 CCAGGTCACTCTGAGGAACGTCTTTGGGAAACCTGTGCCCT CCAGGTCACTCTGAGGAACGTATTTGGGAAACCTGTGCCCT < 41bp 0.510584911995737 0.859391520187778 0.7650262 0.78927064 prediction 0.697613216384083 Functional Gain - POMT1 ENSG00000130714 CDS Human protein_coding chr9:134386797 chr9:134386798 nonsynonymous SNV 0.656 2 22 hPsi_associated_SNPs_22221 0 0 1 0 2 Endoplasmic reticulum 0.438718592995101 0.438718592996979 0.0484888800000001 0 hPsi_site_15945 iPseU_CNN:0.0484888800000001;iRNA_PseU:0 15946 chr6 33219368 33219368 1 + G A HNSC 33219367 + 33219347 33219387 41 TGACTCAGAGATTCCACTGATGATTTCCAGGAACTACCAAA TGACTCAGAGATTCCACTGATAATTTCCAGGAACTACCAAA < 41bp 0.471327484259692 0.848802144335426 0.21422017 0.30547705 prediction 0.697604288670852 Functional Gain - VPS52 ENSG00000223501 CDS Human protein_coding chr6:33219367 chr6:33219368 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_22222 0 0 0 0 1 Ribosome 0.438969935790032 0.438961797151205 0 0 hPsi_site_15946 iPseU_CNN:0;iRNA_PseU:0 15947 chr8 144804403 144804403 1 + G A SKCM 144804402 + 144804382 144804422 41 ACTGGGCCACCTGCCCCTGCTGGAGGGGCACCATGTGTGAG ACTGGGCCACCTGCCCCTGCTAGAGGGGCACCATGTGTGAG < 41bp 0.464951941756485 0.848800938003154 0.25716352 0.4070644 prediction 0.697601876006309 Functional Gain - MAPK15 ENSG00000181085 CDS Human protein_coding chr8:144804402 chr8:144804403 synonymous SNV . 0 22 hPsi_associated_SNPs_22223 0 0 0 0 0 chromatin 0.438885656482493 0.438185865581996 0 0 hPsi_site_15947 iPseU_CNN:0;iRNA_PseU:0 15948 chr16 89759837 89759837 1 + C A BLCA 89759836 + 89759816 89759856 41 CCTGGCCCGGGCCTATGGTGTCCCAGTAAAGCCAATGACCC CCTGGCCCGGGCCTATGGTGTACCAGTAAAGCCAATGACCC < 41bp 0.493171020874904 0.848787996713404 0.2182948 0.6413487 prediction 0.697575993426808 Functional Gain - CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759836 chr16:89759837 synonymous SNV . 0 22 hPsi_associated_SNPs_22224 0 0 1 0 2 chromatin 0.438718595457443 0.438718593017023 0.2826974 0 hPsi_site_15948 iPseU_CNN:0.2826974;iRNA_PseU:0 15949 chr1 161179046 161179046 1 + C A SKCM 161179045 + 161179025 161179065 41 TGTAACGAACAGGCCTATTCTCTAGCTGTGGAGAAGTTGCT TGTAACGAACAGGCCTATTCTATAGCTGTGGAGAAGTTGCT < 41bp 0.497789644137113 0.848781616996103 0.29172948 0.32337233 prediction 0.697563233992207 Functional Gain - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179045 chr1:161179046 nonsynonymous SNV 0.887 2 22 hPsi_associated_SNPs_22225 0 0 1 0 1 Ribosome 0.438723221930665 0.43871417229604 0 0 hPsi_site_15949 iPseU_CNN:0;iRNA_PseU:0 15950 chr11 281681 281681 1 + G A COAD 281680 + 281660 281700 41 GGAGCTGGCGCTGCAGCGAGTGCGCTTCTGCCGCATGGACG GGAGCTGGCGCTGCAGCGAGTACGCTTCTGCCGCATGGACG < 41bp 0.460449967304597 0.848776300196574 0.40818453 0.8358078 prediction 0.697552600393147 Functional Gain - NLRP6 ENSG00000174885 CDS Human protein_coding chr11:281680 chr11:281681 synonymous SNV . 0 22 hPsi_associated_SNPs_22226 0 0 0 0 0 chromatin 0.438712075921032 0.43787335682914 0.6716156 0 hPsi_site_15950 iPseU_CNN:0.6716156;iRNA_PseU:0 15951 chr17 72233522 72233522 1 + G A THYM 72233521 + 72233501 72233541 41 TGCTGCCCGGGGCGATTACCTGCAGACCCTGAAGTTCATAC TGCTGCCCGGGGCGATTACCTACAGACCCTGAAGTTCATAC < 41bp 0.439242330426212 0.848770327347458 0.3272612 0.3842215 prediction 0.697540654694916 Functional Gain - TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72233521 chr17:72233522 synonymous SNV . 0 22 hPsi_associated_SNPs_22227 0 0 0 0 1 Endoplasmic reticulum 0.438739989787583 0.43866977116632 0 0 hPsi_site_15951 iPseU_CNN:0;iRNA_PseU:0 15952 chr17 17701752 17701752 1 + G A CESC 17701751 + 17701731 17701771 41 GGTGCATGAGGCCTGTGCCGTGTGGACCGGCGGCGTCTACC GGTGCATGAGGCCTGTGCCGTATGGACCGGCGGCGTCTACC < 41bp 0.47329006657247 0.848769701684967 0.32366884 0.42570996 prediction 0.697539403369933 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17701751 chr17:17701752 synonymous SNV . 0 22 hPsi_associated_SNPs_22228 0 0 1 0 0 chromatin 0.438754326173673 0.438721548401233 0 0 hPsi_site_15952 iPseU_CNN:0;iRNA_PseU:0 15953 chr12 123950471 123950471 1 + G A rs112947708 123950470 + 123950450 123950490 41 GATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGT GATATTTGTGGACTACGAGCTAGAAAGGACTCTCAAAGGGT < 41bp 0.522226136718865 0.870994539195803 0.18778032 0.26341414 prediction 0.697536804953875 Functional Gain - SNRNP35 ENSG00000184209 CDS Human protein_coding chr12:123950470 chr12:123950471 synonymous SNV . 0 22 hPsi_associated_SNPs_22229 0 0 1 0 0 Nucleus 0.43871995987246 0.438732905521243 0 0 hPsi_site_15953 iPseU_CNN:0;iRNA_PseU:0 15954 chr9 134396807 134396807 1 + G A GBM 134396806 + 134396786 134396826 41 TCTGGCCATCTACGCCCTGCTGTCCTTGTGGTACCTGCTCC TCTGGCCATCTACGCCCTGCTATCCTTGTGGTACCTGCTCC < 41bp 0.448375859418617 0.848767956082614 0.2621344 0.4402757 prediction 0.697535912165228 Functional Gain - POMT1 ENSG00000130714 CDS Human protein_coding chr9:134396806 chr9:134396807 synonymous SNV . 0 22 hPsi_associated_SNPs_22230 0 0 1 0 1 Endoplasmic reticulum 0.438718592995072 0.438718592995068 0 0 hPsi_site_15954 iPseU_CNN:0;iRNA_PseU:0 15955 chr8 11295664 11295664 1 + G A rs77542386 11295663 + 11295643 11295683 41 TGAATGGACATGGGGCTGGATGAAAAGACTTCCGCCTGCCT TGAATGGACATGGGGCTGGATAAAAAGACTTCCGCCTGCCT < 41bp 0.526412408940975 0.87517594263623 0.32452708 0.45892933 prediction 0.69752706739051 Functional Gain - FAM167A-AS1 ENSG00000184608 CDS Human antisense chr8:11295663 chr8:11295664 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22231 0 0 0 0 1 unknown 0.438417470863846 0.438717402086836 0 0 hPsi_site_15955 iPseU_CNN:0;iRNA_PseU:0 15956 chr17 21204239 21204239 1 + G A SKCM 21204238 + 21204218 21204258 41 GAAGCGGCTGCTCATGGACCTGGACATCAACATGCGCACGG GAAGCGGCTGCTCATGGACCTAGACATCAACATGCGCACGG < 41bp 0.548391159583639 0.897137849230448 0.23368263 0.31091428 prediction 0.697493379293616 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21204238 chr17:21204239 synonymous SNV . 0 22 hPsi_associated_SNPs_22232 0 0 1 0 2 Ribosome 0.438702065319813 0.439125718578507 0 0 hPsi_site_15956 iPseU_CNN:0;iRNA_PseU:0 15957 chr19 3905584 3905584 1 + G A UCEC 3905583 + 3905563 3905603 41 GACCTGGATATTAACGTGGATGACATCGAGACCCCCGATGA GACCTGGATATTAACGTGGATAACATCGAGACCCCCGATGA < 41bp 0.450069758126731 0.848743803709067 0.39753658 0.7773664 prediction 0.697487607418135 Functional Gain - ATCAY ENSG00000167654 CDS Human protein_coding chr19:3905583 chr19:3905584 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_22233 0 0 0 0 1 nucleus 0.438718592602137 0.438718593010241 0.5547328 0 hPsi_site_15957 iPseU_CNN:0.5547328;iRNA_PseU:0 15958 chr14 20295653 20295653 1 + G A LUSC 20295652 + 20295632 20295672 41 ATAAGAGAATTCATCCTCCTTGGTCTGACCCAGTCTCAAGA ATAAGAGAATTCATCCTCCTTAGTCTGACCCAGTCTCAAGA < 41bp 0.503137669845736 0.851878455440718 0.26161057 0.39151335 prediction 0.697481571189964 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20295652 chr14:20295653 nonsynonymous SNV 0.317 1 22 hPsi_associated_SNPs_22234 0 0 0 0 0 unknown 0.439985918615917 0.438604538281878 0 0 hPsi_site_15958 iPseU_CNN:0;iRNA_PseU:0 15959 chr11 70049645 70049645 1 + G A UCEC 70049644 + 70049624 70049664 41 TGACCGAGCTCAAGTTCCTATGCCTCGGGCGCGTGGGCAAG TGACCGAGCTCAAGTTCCTATACCTCGGGCGCGTGGGCAAG < 41bp 0.466154743976597 0.848740041295553 0.24853116 0.66878104 prediction 0.697480082591106 Functional Gain - FADD ENSG00000168040 CDS Human protein_coding chr11:70049644 chr11:70049645 nonsynonymous SNV 0.144 4 22 hPsi_associated_SNPs_22235 0 0 1 0 0 Ribosome 0.438721400330784 0.438718510556131 0.33756208 0 hPsi_site_15959 iPseU_CNN:0.33756208;iRNA_PseU:0 15960 chr14 75475859 75475859 1 + G A BLCA 75475858 + 75475838 75475878 41 TACATCTACCGCCTGATGAGTGAACTCTACCATCCTGATGA TACATCTACCGCCTGATGAGTAAACTCTACCATCCTGATGA < 41bp 0.528920624566277 0.8776574853634 0.23582569 0.4447645 prediction 0.697473721594247 Functional Gain - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75475858 chr14:75475859 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_22236 0 0 1 0 0 Ribosome 0.438719407184553 0.438718584534188 0 0 hPsi_site_15960 iPseU_CNN:0;iRNA_PseU:0 15961 chr11 65113518 65113518 1 + G A BLCA 65113517 + 65113497 65113537 41 AGCTGGTGTCCTGTTCTGACTGTGGCCGCTCAGGTACTGCT AGCTGGTGTCCTGTTCTGACTATGGCCGCTCAGGTACTGCT < 41bp 0.45715423997922 0.848734674396424 0.41927978 0.6954869 prediction 0.697469348792848 Functional Gain - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65113517 chr11:65113518 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22237 0 0 1 0 1 Ribosome 0.438413720051615 0.438609185058631 0.3909738 0 hPsi_site_15961 iPseU_CNN:0.3909738;iRNA_PseU:0 15962 chr20 36954734 36954734 1 + C A LUAD 36954733 + 36954713 36954753 41 CCTCCACCCCGCCACACCTGTCTGTGCAGCCCACCGGCCTT CCTCCACCCCGCCACACCTGTATGTGCAGCCCACCGGCCTT < 41bp 0.503015589979278 0.85174729540861 0.18781841 0.38860664 prediction 0.697463410858665 Functional Gain - BPI ENSG00000101425 CDS Human protein_coding chr20:36954733 chr20:36954734 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_22238 0 0 0 0 1 Nucleus 0.43862284531857 0.438718584795037 0 0 hPsi_site_15962 iPseU_CNN:0;iRNA_PseU:0 15963 chr5 81608496 81608496 1 + C A UCEC 81608495 + 81608475 81608515 41 TAGTTTGCGCCGAGTCGAGATCATTTCCAACAATTCAATCC TAGTTTGCGCCGAGTCGAGATAATTTCCAACAATTCAATCC < 41bp 0.500035885177991 0.848760784212332 0.16465664 0.31413347 prediction 0.69744979806868 Functional Gain - ATP6AP1L ENSG00000205464 CDS Human protein_coding chr5:81608495 chr5:81608496 synonymous SNV . 0 22 hPsi_associated_SNPs_22239 0 0 1 0 1 Endoplasmic reticulum 0.438591972568524 0.438753300549972 0 0 hPsi_site_15963 iPseU_CNN:0;iRNA_PseU:0 15964 chr19 8841744 8841744 1 + G A UCEC 8841743 + 8841723 8841763 41 GGGCGTCCTGTTGGTCCTCATGTCTTATGACCGTTATGTTG GGGCGTCCTGTTGGTCCTCATATCTTATGACCGTTATGTTG < 41bp 0.521607929935024 0.870323697054954 0.21130109 0.32599342 prediction 0.69743153423986 Functional Gain - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8841743 chr19:8841744 nonsynonymous SNV 0.409 4 22 hPsi_associated_SNPs_22240 0 0 0 0 0 unknown 0.438718592625516 0.438718581025422 0 0 hPsi_site_15964 iPseU_CNN:0;iRNA_PseU:0 15965 chr12 110906383 110906383 1 + C T CESC 110906384 - 110906364 110906404 41 TTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCA TTCCAGATCCTCAGCACATTTACAAATCGCGAGGGTCACCA < 41bp 0.476585890717428 0.848713932100371 0.35515684 0.68283755 prediction 0.697427864200742 Functional Gain - GPN3 ENSG00000111231 CDS Human protein_coding chr12:110906384 chr12:110906383 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_22241 0 0 0 0 0 Ribosome 0.438718591070193 0.438690113083736 0.3656751 0 hPsi_site_15965 iPseU_CNN:0.3656751;iRNA_PseU:0 15966 chr16 31391356 31391356 1 + C A rs147269916 31391355 + 31391335 31391375 41 CGCACCCCCAGCATCTGACTTCCTGGCGCACATTCAGAAGA CGCACCCCCAGCATCTGACTTACTGGCGCACATTCAGAAGA < 41bp 0.494826001939418 0.84870643586062 0.336796 0.5846407 prediction 0.697412871721241 Functional Gain - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31391355 chr16:31391356 nonsynonymous SNV 0.432 0 22 hPsi_associated_SNPs_22242 0 0 0 0 2 Nucleus 0.440219337388633 0.458608035878295 0.1692814 0 hPsi_site_15966 iPseU_CNN:0.1692814;iRNA_PseU:0 15967 chr1 206225076 206225076 1 + G A SKCM 206225075 + 206225055 206225095 41 GGCTATCTTCGTTCTGCCGGTGACCATGCTCACGGCCTGCT GGCTATCTTCGTTCTGCCGGTAACCATGCTCACGGCCTGCT < 41bp 0.535003115217565 0.883700167329436 0.2757728 0.7985357 prediction 0.697394104223742 Functional Gain - AVPR1B ENSG00000198049 CDS Human protein_coding chr1:206225075 chr1:206225076 synonymous SNV . 0 22 hPsi_associated_SNPs_22243 0 0 0 0 0 unknown 0.438656528329299 0.438718595256863 0.5970714 0 hPsi_site_15967 iPseU_CNN:0.5970714;iRNA_PseU:0 15968 chr22 41924494 41924494 1 + C T UCEC 41924495 - 41924475 41924515 41 CCCGTTGGGGTGCTTGATGATGCACTTCAGGGGCTGCAAGG CCCGTTGGGGTGCTTGATGATACACTTCAGGGGCTGCAAGG < 41bp 0.453204362201309 0.848693172924885 0.3053584 0.77350307 prediction 0.69738634584977 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924495 chr22:41924494 synonymous SNV . 0 22 hPsi_associated_SNPs_22244 0 0 1 0 0 chromatin 0.438718592995102 0.438718592995106 0.54700614 0 hPsi_site_15968 iPseU_CNN:0.54700614;iRNA_PseU:0 15969 chr11 75431083 75431083 1 + C A UCEC 75431082 + 75431062 75431102 41 AGCCCTCCTGTTTACAAGATTCTGGCTCCTCACTGTCCTGT AGCCCTCCTGTTTACAAGATTATGGCTCCTCACTGTCCTGT < 41bp 0.492775700978881 0.848685758794352 0.32142234 0.5238947 prediction 0.697371517588704 Functional Gain - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75431082 chr11:75431083 nonsynonymous SNV 0.979 2 22 hPsi_associated_SNPs_22245 0 0 0 0 1 exosome 0.438718592995102 0.438718592961865 0.0477894000000001 0 hPsi_site_15969 iPseU_CNN:0.0477894000000001;iRNA_PseU:0 15970 chr1 150246528 150246528 1 + G A BRCA 150246527 + 150246507 150246547 41 GAAGAAAGACTGGGAGAGGATGAATATTATCAGGTGGTCTA GAAGAAAGACTGGGAGAGGATAAATATTATCAGGTGGTCTA < 41bp 0.536270636536692 0.884950491592661 0.2614354 0.31282163 prediction 0.697359710111936 Functional Gain - C1orf54 ENSG00000118292 CDS Human protein_coding chr1:150246527 chr1:150246528 nonsynonymous SNV 0.859 0 22 hPsi_associated_SNPs_22246 0 0 0 0 2 nucleolus 0.438718587941415 0.438718541341286 0 0 hPsi_site_15970 iPseU_CNN:0;iRNA_PseU:0 15971 chr16 1375235 1375235 1 + G A rs116868327 1375234 + 1375214 1375254 41 GAACCTTCTAGAACCTGGGCTGTGCTGCTTTTGAGCCTCAG GAACCTTCTAGAACCTGGGCTATGCTGCTTTTGAGCCTCAG < 41bp 0.469257339985125 0.848666686244368 0.32359934 0.32183483 prediction 0.697333372488737 Functional Gain - UBE2I ENSG00000103275 UTR3 Human protein_coding chr16:1375234 chr16:1375235 . . 0 22 hPsi_associated_SNPs_22247 0 0 1 6 0 Ribosome 0.438705251440237 0.438830515521307 0 0 hPsi_site_15971 iPseU_CNN:0;iRNA_PseU:0 15972 chr2 228783537 228783537 1 + G A UCEC 228783536 + 228783516 228783556 41 GCTGCCACAAGAAAATGCATTGCCAAACTGGAAGGTCATGA GCTGCCACAAGAAAATGCATTACCAAACTGGAAGGTCATGA < 41bp 0.461305928271209 0.848657710202485 0.24282229 0.35292268 prediction 0.69731542040497 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228783536 chr2:228783537 nonsynonymous SNV 0.610 0 22 hPsi_associated_SNPs_22248 0 0 0 3 2 exosome 0.43871171585069 0.438717396344921 0 0 hPsi_site_15972 iPseU_CNN:0;iRNA_PseU:0 15973 chr11 60702234 60702234 1 + G A BLCA 60702233 + 60702213 60702253 41 GAGCCCGGTGTCACCTCCATTGAGGTAAGCAGCTGGGGACC GAGCCCGGTGTCACCTCCATTAAGGTAAGCAGCTGGGGACC < 41bp 0.524830729674522 0.873485838815423 0.30584556 0.4651503 prediction 0.697310218281801 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60702233 chr11:60702234 nonsynonymous SNV 0.932 0 22 hPsi_associated_SNPs_22249 0 0 1 0 1 Ribosome 0.438718592995212 0.438718592963462 0 0 hPsi_site_15973 iPseU_CNN:0;iRNA_PseU:0 15974 chr16 29994970 29994970 1 + C A SKCM 29994969 + 29994949 29994989 41 CCGAGACCACTTTGCCACCATCCGAACCGCCTCCCTGGTGA CCGAGACCACTTTGCCACCATACGAACCGCCTCCCTGGTGA < 41bp 0.501820098869562 0.850460844493167 0.25328192 0.36010778 prediction 0.697281491247209 Functional Gain - TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994969 chr16:29994970 synonymous SNV . 0 22 hPsi_associated_SNPs_22250 0 0 1 0 1 Nucleus 0.438656129174487 0.438876152485777 0 0 hPsi_site_15974 iPseU_CNN:0;iRNA_PseU:0 15975 chr19 14139075 14139075 1 + G A SKCM 14139074 + 14139054 14139094 41 GGGTGCTGACCGGGGAGCTGTGGCCGGGAGCTGAGGCCCGG GGGTGCTGACCGGGGAGCTGTAGCCGGGAGCTGAGGCCCGG < 41bp 0.529115082693065 0.877753885187578 0.17536768 0.33591348 prediction 0.697277604989026 Functional Gain - RLN3 ENSG00000171136 CDS Human protein_coding chr19:14139074 chr19:14139075 stopgain 0.016 0 22 hPsi_associated_SNPs_22251 0 0 0 0 0 exosome 0.438718592839518 0.43871859299521 0 0 hPsi_site_15975 iPseU_CNN:0;iRNA_PseU:0 15976 chr17 694988 694988 1 + G A BLCA 694987 + 694967 695007 41 GGTGTGTGATCAACGAGTGATGAAGTTTCACAAGTATGAGG GGTGTGTGATCAACGAGTGATAAAGTTTCACAAGTATGAGG < 41bp 0.468864686967038 0.848621561214244 0.26514846 0.33973038 prediction 0.697243122428487 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:694987 chr17:694988 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_22252 0 0 1 0 0 chromatin 0.438766947507826 0.439616047282752 0 0 hPsi_site_15976 iPseU_CNN:0;iRNA_PseU:0 15977 chrX 150885840 150885840 1 + G A SKCM 150885839 + 150885819 150885859 41 CTGCTTCAGCCAAACGAGTTTGGAATATGACTGCCACCCGA CTGCTTCAGCCAAACGAGTTTAGAATATGACTGCCACCCGA < 41bp 0.45821302218879 0.848604350930552 0.46534708 0.7518594 prediction 0.697208701861105 Functional Gain - FATE1 ENSG00000147378 CDS Human protein_coding chrX:150885839 chrX:150885840 stopgain 0.081 0 22 hPsi_associated_SNPs_22253 0 0 0 0 2 Cytosol 0.43871859259218 0.438718593643989 0.5037188 0 hPsi_site_15977 iPseU_CNN:0.5037188;iRNA_PseU:0 15978 chr5 131670540 131670540 1 + G A COAD 131670539 + 131670519 131670559 41 CATTACAGCCTGGCTGCTATTGCGAACCCTGCCCAGGCGTT CATTACAGCCTGGCTGCTATTACGAACCCTGCCCAGGCGTT < 41bp 0.441115819499416 0.848604046742481 0.33798757 0.8938211 prediction 0.697208093484963 Functional Gain - SLC22A4 ENSG00000197208 CDS Human protein_coding chr5:131670539 chr5:131670540 synonymous SNV . 0 22 hPsi_associated_SNPs_22254 0 0 0 0 1 Endoplasmic reticulum 0.438718462353105 0.4387182839369 0.7876422 0 hPsi_site_15978 iPseU_CNN:0.7876422;iRNA_PseU:0 15979 chr11 130344461 130344461 1 + G A rs77835179 130344460 + 130344440 130344480 41 GGGAAAGCCAGTAGGGAGTCTGCTGTCTTCTTCAAGATGGA GGGAAAGCCAGTAGGGAGTCTACTGTCTTCTTCAAGATGGA < 41bp 0.510518267299081 0.85912189060629 0.21171123 0.3065674 prediction 0.697207246614417 Functional Gain - ADAMTS15 ENSG00000166106 UTR3 Human protein_coding chr11:130344460 chr11:130344461 . . 0 22 hPsi_associated_SNPs_22255 0 0 0 0 0 exosome 0.438722857738322 0.438731239242186 0 0 hPsi_site_15979 iPseU_CNN:0;iRNA_PseU:0 15980 chr20 54970674 54970674 1 + G A LUSC 54970673 + 54970653 54970693 41 CAAGCTGATCATTAGCCAGCTGCTATATGACGGCTACATCA CAAGCTGATCATTAGCCAGCTACTATATGACGGCTACATCA < 41bp 0.457177020069078 0.848599832088727 0.29858172 0.5784908 prediction 0.697199664177454 Functional Gain - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54970673 chr20:54970674 synonymous SNV . 0 22 hPsi_associated_SNPs_22256 0 0 1 0 1 Cytosol 0.438718691106145 0.438718240497579 0.1569816 0 hPsi_site_15980 iPseU_CNN:0.1569816;iRNA_PseU:0 15981 chr16 67859918 67859918 1 + C A UCEC 67859917 + 67859897 67859937 41 GAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCC GAAGGAACGGGACCAATTCTTATCTGAGCTGCAGGAGATCC < 41bp 0.510829585751823 0.859426803802873 0.2889372 0.47159404 prediction 0.6971944361021 Functional Gain - TSNAXIP1 ENSG00000102904 CDS Human protein_coding chr16:67859917 chr16:67859918 nonsynonymous SNV 0.366 0 22 hPsi_associated_SNPs_22257 0 0 0 0 2 exosome 0.438718592996379 0.438718592995116 0 0 hPsi_site_15981 iPseU_CNN:0;iRNA_PseU:0 15982 chr1 26513938 26513938 1 + C A COAD 26513937 + 26513917 26513957 41 CCATGATGTGTACAAACCCTTCATCTTCGCTGCTGATACCC CCATGATGTGTACAAACCCTTAATCTTCGCTGCTGATACCC < 41bp 0.493243149758803 0.848593100498612 0.17880824 0.60978097 prediction 0.697186200997224 Functional Gain - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26513937 chr1:26513938 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22258 0 0 0 0 1 Cytosol 0.438716825869157 0.438718041464022 0.21956194 0 hPsi_site_15982 iPseU_CNN:0.21956194;iRNA_PseU:0 15983 chr3 64184562 64184562 1 + G A LGG 64184561 + 64184541 64184581 41 CTGAAAGTCAAACATGAGTTTGCTGATGGTCTTCTCCATCT CTGAAAGTCAAACATGAGTTTACTGATGGTCTTCTCCATCT < 41bp 0.528750526621323 0.877343319398204 0.27512217 0.7295321 prediction 0.697185585553761 Functional Gain - PRICKLE2 ENSG00000163637 CDS Human protein_coding chr3:64184561 chr3:64184562 synonymous SNV . 0 22 hPsi_associated_SNPs_22259 0 0 0 0 0 Endoplasmic reticulum 0.438655323697132 0.438734242135126 0.4590642 0 hPsi_site_15983 iPseU_CNN:0.4590642;iRNA_PseU:0 15984 chr17 47589374 47589374 1 + G A HNSC 47589373 + 47589353 47589393 41 CTCCGTGGACAGCCAGAGCCTGCATGACCAGCAGCCCCACA CTCCGTGGACAGCCAGAGCCTACATGACCAGCAGCCCCACA < 41bp 0.451064647254378 0.848584145327899 0.4680054 0.6085294 prediction 0.697168290655798 Functional Gain - NGFR ENSG00000064300 CDS Human protein_coding chr17:47589373 chr17:47589374 synonymous SNV . 0 22 hPsi_associated_SNPs_22260 0 0 0 0 0 exosome 0.438721294531243 0.438889008498236 0.2170588 0 hPsi_site_15984 iPseU_CNN:0.2170588;iRNA_PseU:0 15985 chr16 19126503 19126503 1 + G A rs115342574 19126502 + 19126482 19126522 41 TGATGCCTTCTGCGTGGATGTGCGCGGGCGGCGTCACCTCT TGATGCCTTCTGCGTGGATGTACGCGGGCGGCGTCACCTCT < 41bp 0.531236059723945 0.879819736739679 0.2925229 0.7182634 prediction 0.697167354031466 Functional Gain - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19126502 chr16:19126503 synonymous SNV . 0 22 hPsi_associated_SNPs_22261 0 0 1 0 0 Ribosome 0.438687663158482 0.436290669588772 0.4365268 0 hPsi_site_15985 iPseU_CNN:0.4365268;iRNA_PseU:0 15986 chr4 41984594 41984594 1 + G A SKCM 41984593 + 41984573 41984613 41 GTAGAAATCGAGGCAAGGGGTGGAGGGCCACTCGCCTGTTC GTAGAAATCGAGGCAAGGGGTAGAGGGCCACTCGCCTGTTC < 41bp 0.528506006653333 0.877083809079958 0.38413936 0.66741955 prediction 0.697155604853249 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984593 chr4:41984594 stopgain 0.847 1 22 hPsi_associated_SNPs_22262 0 0 0 0 0 Nucleus 0.438718592995102 0.438718593135716 0.3348391 0 hPsi_site_15986 iPseU_CNN:0.3348391;iRNA_PseU:0 15987 chr20 43109009 43109009 1 + G A UCEC 43109008 + 43108988 43109028 41 AAGCCATCAGCCTTAAAAGATGTCCTTGCTTCCGGGTTCCT AAGCCATCAGCCTTAAAAGATATCCTTGCTTCCGGGTTCCT < 41bp 0.545178117478764 0.893746070684555 0.4395711 0.67641103 prediction 0.697135906411583 Functional Gain - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43109008 chr20:43109009 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_22263 0 0 1 0 1 Ribosome 0.438721014724376 0.438827107764506 0.35282206 0 hPsi_site_15987 iPseU_CNN:0.35282206;iRNA_PseU:0 15988 chr1 11779769 11779769 1 + G A rs139141149 11779768 + 11779748 11779788 41 GTCTAGCGGCCCCGCGGGACTGGGGACTGAGCCCAGGAGGT GTCTAGCGGCCCCGCGGGACTAGGGACTGAGCCCAGGAGGT < 41bp 0.472033594346377 0.848553863105998 0.2536024 0.39510834 prediction 0.697107726211996 Functional Gain - DRAXIN ENSG00000162490 UTR3 Human protein_coding chr1:11779768 chr1:11779769 . . 0 22 hPsi_associated_SNPs_22264 0 0 0 1 0 exosome 0.438732556196122 0.438674832377587 0 0 hPsi_site_15988 iPseU_CNN:0;iRNA_PseU:0 15989 chrX 75397483 75397483 1 + G A UCEC 75397482 + 75397462 75397502 41 CAATTCTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTA CAATTCTTTGCCATTGAAATTACTCGGAACCGGGAAGGCTA < 41bp 0.469915882244215 0.848543289443473 0.19453564 0.38079137 prediction 0.697086578886946 Functional Gain - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397482 chrX:75397483 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22265 0 0 1 0 1 nucleoplasm 0.438718617777672 0.438718591214845 0 0 hPsi_site_15989 iPseU_CNN:0;iRNA_PseU:0 15990 chr3 97851814 97851814 1 + G A LGG 97851813 + 97851793 97851833 41 CTTCTTAGCTAAGAGTAAGATGATATCTCTCTCTGAATGCA CTTCTTAGCTAAGAGTAAGATAATATCTCTCTCTGAATGCA < 41bp 0.497453951649188 0.848538600596908 0.2006849 0.26682228 prediction 0.697077201193817 Functional Gain - OR5H1 ENSG00000231192 CDS Human protein_coding chr3:97851813 chr3:97851814 nonsynonymous SNV 0.042 0 22 hPsi_associated_SNPs_22266 0 0 0 0 0 unknown 0.438719284343599 0.438718864495496 0 0 hPsi_site_15990 iPseU_CNN:0;iRNA_PseU:0 15991 chr5 178454554 178454554 1 + G A KICH 178454553 + 178454533 178454573 41 GGACTCTGCCCAGAGAGCCTTGTACCGGGAGGTGATGCTGG GGACTCTGCCCAGAGAGCCTTATACCGGGAGGTGATGCTGG < 41bp 0.447561508872765 0.848533927310407 0.16361713 0.25484005 prediction 0.697067854620814 Functional Gain - ZNF879 ENSG00000234284 CDS Human protein_coding chr5:178454553 chr5:178454554 nonsynonymous SNV 0.500 1 22 hPsi_associated_SNPs_22267 0 0 0 0 2 exosome 0.438696635685385 0.438690633618417 0 0 hPsi_site_15991 iPseU_CNN:0;iRNA_PseU:0 15992 chr2 11053551 11053551 1 + G A BRCA 11053550 + 11053530 11053570 41 GCTGCTCATGTACCTGGCAGTGGGTATCTTCGTCTTCTCTG GCTGCTCATGTACCTGGCAGTAGGTATCTTCGTCTTCTCTG < 41bp 0.528639434324874 0.877160614495356 0.23952577 0.29246286 prediction 0.697042360340964 Functional Gain - KCNF1 ENSG00000162975 CDS Human protein_coding chr2:11053550 chr2:11053551 synonymous SNV . 0 22 hPsi_associated_SNPs_22268 0 0 0 0 0 exosome 0.43871152808266 0.438645999451231 0 0 hPsi_site_15992 iPseU_CNN:0;iRNA_PseU:0 15993 chr7 44252663 44252663 1 + G A rs547697688 44252662 + 44252642 44252682 41 AAAGGGGGATGTTTTCCTGGTGTTTGGATGGTCAGCTGGGA AAAGGGGGATGTTTTCCTGGTATTTGGATGGTCAGCTGGGA < 41bp 0.483923186354497 0.848520959282335 0.2612011 0.5674378 prediction 0.697041918564669 Functional Gain - YKT6 ENSG00000106636 UTR3 Human protein_coding chr7:44252662 chr7:44252663 . . 0 22 hPsi_associated_SNPs_22269 0 0 1 0 0 Ribosome 0.43871859301822 0.438718594329499 0.1348756 0 hPsi_site_15993 iPseU_CNN:0.1348756;iRNA_PseU:0 15994 chr16 69177241 69177241 1 + G A PRAD 69177240 + 69177220 69177260 41 CTCAGCCACTGGGACGCTTGTGAAGAGCCATCTCATCGCTA CTCAGCCACTGGGACGCTTGTAAAGAGCCATCTCATCGCTA < 41bp 0.544467106745375 0.892984082630632 0.4376867 0.9198905 prediction 0.697033951770514 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69177240 chr16:69177241 synonymous SNV . 0 22 hPsi_associated_SNPs_22270 0 0 1 0 1 Cytosol 0.438718569498638 0.438718592997821 0.839781 0 hPsi_site_15994 iPseU_CNN:0.839781;iRNA_PseU:0 15995 chr20 61300394 61300394 1 + G A LUAD 61300393 + 61300373 61300413 41 GGTGTACCAGAATTCGGCCATGAGCCGCTACATACTCATCA GGTGTACCAGAATTCGGCCATAAGCCGCTACATACTCATCA < 41bp 0.448849482812252 0.84851530521839 0.20245734 0.2746697 prediction 0.697030610436779 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61300393 chr20:61300394 nonsynonymous SNV 0.557 1 22 hPsi_associated_SNPs_22271 0 0 1 1 1 Endoplasmic reticulum 0.438723052675766 0.438959450401261 0 0 hPsi_site_15995 iPseU_CNN:0;iRNA_PseU:0 15996 chr18 47110036 47110036 1 + G A HNSC 47110035 + 47110015 47110055 41 GGGAGGGGGCCTCTCAGTCTTGGTACAACCTGTGGAAGGAG GGGAGGGGGCCTCTCAGTCTTAGTACAACCTGTGGAAGGAG < 41bp 0.438814063219657 0.848494425684029 0.12980542 0.16001025 prediction 0.696988851368057 Functional Gain - LIPG ENSG00000101670 CDS Human protein_coding chr18:47110035 chr18:47110036 stopgain 0.621 1 22 hPsi_associated_SNPs_22272 0 0 1 0 0 Nucleus 0.438718592995099 0.438718567149714 0 0 hPsi_site_15996 iPseU_CNN:0;iRNA_PseU:0 15997 chr17 56277680 56277680 1 + G A SKCM 56277679 + 56277659 56277699 41 GGATGAGCTCCGGGACCGGCTGTTTCGGCAAGTGAGGAGGA GGATGAGCTCCGGGACCGGCTATTTCGGCAAGTGAGGAGGA < 41bp 0.444592250647577 0.848474107004622 0.43798867 0.6684995 prediction 0.696948214009245 Functional Gain - EPX ENSG00000121053 CDS Human protein_coding chr17:56277679 chr17:56277680 synonymous SNV . 0 22 hPsi_associated_SNPs_22273 0 0 0 0 2 chromatin 0.438141698412026 0.43839553523073 0.336999 0 hPsi_site_15997 iPseU_CNN:0.336999;iRNA_PseU:0 15998 chr17 32597376 32597376 1 + G A PRAD 32597375 + 32597355 32597395 41 GCTTTCAGCCCCCAGGGGCTTGCTCAGCCAGGTAAGGTCCC GCTTTCAGCCCCCAGGGGCTTACTCAGCCAGGTAAGGTCCC < 41bp 0.476305391644231 0.848452289961676 0.18404108 0.31184888 prediction 0.696904579923352 Functional Gain - CCL7 ENSG00000108688 CDS Human protein_coding chr17:32597375 chr17:32597376 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_22274 0 0 0 0 1 unknown 0.4387185929871 0.438718591804104 0 0 hPsi_site_15998 iPseU_CNN:0;iRNA_PseU:0 15999 chr19 45852765 45852765 1 + G A BLCA 45852764 + 45852744 45852784 41 TGCCAGAACCAGGGCAAGTTTGAGGACGTGGAGCGGCACTA TGCCAGAACCAGGGCAAGTTTAAGGACGTGGAGCGGCACTA < 41bp 0.455359037595721 0.848449903716515 0.30542892 0.33672774 prediction 0.696899807433031 Functional Gain - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45852764 chr19:45852765 nonsynonymous SNV 0.983 1 22 hPsi_associated_SNPs_22275 0 0 1 0 2 nucleolus 0.438718592995161 0.438718592996365 0 0 hPsi_site_15999 iPseU_CNN:0;iRNA_PseU:0 16000 chr1 26158516 26158516 1 + G A BLCA 26158515 + 26158495 26158535 41 ATATCAGTAGAAAAGGAAATTGACAACCCTCAGCTCTGCAA ATATCAGTAGAAAAGGAAATTAACAACCCTCAGCTCTGCAA < 41bp 0.48500892574708 0.84844623494446 0.2734592 0.36953592 prediction 0.696892469888921 Functional Gain - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26158515 chr1:26158516 synonymous SNV . 0 22 hPsi_associated_SNPs_22276 0 0 1 1 0 Ribosome 0.438719005374297 0.438718349867625 0 0 hPsi_site_16000 iPseU_CNN:0;iRNA_PseU:0 16001 chr3 52817270 52817270 1 + C A UCEC 52817269 + 52817249 52817289 41 TTTGCTCCGGGGAATTGAGATCTTGAACCAAGTTCAGGAAA TTTGCTCCGGGGAATTGAGATATTGAACCAAGTTCAGGAAA < 41bp 0.503229306574494 0.851667500535342 0.4926837 0.633768 prediction 0.696876387921697 Functional Gain - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52817269 chr3:52817270 synonymous SNV . 0 22 hPsi_associated_SNPs_22277 0 0 0 0 0 Endoplasmic reticulum 0.438718586953522 0.438718574678394 0.267536 0 hPsi_site_16001 iPseU_CNN:0.267536;iRNA_PseU:0 16002 chr3 52326927 52326927 1 + G A LUAD 52326926 + 52326906 52326946 41 TTTTTGAGCGGTGGCACCGATGGGCAGGATGGGCCCACAGA TTTTTGAGCGGTGGCACCGATAGGCAGGATGGGCCCACAGA < 41bp 0.456180943199484 0.848433452081968 0.30666298 0.3554992 prediction 0.696866904163937 Functional Gain - GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52326926 chr3:52326927 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_22278 0 0 1 0 0 chromatin 0.438696041252512 0.438718751320283 0 0 hPsi_site_16002 iPseU_CNN:0;iRNA_PseU:0 16003 chr1 161495417 161495417 1 + G A UCEC 161495416 + 161495396 161495436 41 GGAGCCGGTGGAGAAGGCCCTGCGGGATGCCAAGCTGGACA GGAGCCGGTGGAGAAGGCCCTACGGGATGCCAAGCTGGACA < 41bp 0.53805779203266 0.886491068036068 0.20405647 0.32913274 prediction 0.696866552006817 Functional Gain - HSPA6 ENSG00000173110 CDS Human protein_coding chr1:161495416 chr1:161495417 synonymous SNV . 0 22 hPsi_associated_SNPs_22279 0 0 0 0 0 exosome 0.438718592994812 0.438718597088451 0 0 hPsi_site_16003 iPseU_CNN:0;iRNA_PseU:0 16004 chr2 239016488 239016488 1 + G A rs149388984 239016487 + 239016467 239016507 41 CAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGCG CAATGAGGGGGCCACGGCCCTACACTTTGCAGCCCGAGGCG < 41bp 0.445027490164838 0.848423358101809 0.30997628 0.4736883 prediction 0.696846716203618 Functional Gain - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239016487 chr2:239016488 synonymous SNV . 0 22 hPsi_associated_SNPs_22280 0 0 0 0 0 exosome 0.438725695230173 0.438855890436132 0 0 hPsi_site_16004 iPseU_CNN:0;iRNA_PseU:0 16005 chr1 8404001 8404001 1 + G A STAD 8404000 + 8403980 8404020 41 GGGCTGCCTGTACTCCTCCCTGTTTGTCATTTATGAAATTC GGGCTGCCTGTACTCCTCCCTATTTGTCATTTATGAAATTC < 41bp 0.465649577413617 0.848413559392899 0.21327436 0.26223332 prediction 0.696827118785798 Functional Gain - SLC45A1 ENSG00000162426 CDS Human protein_coding chr1:8404000 chr1:8404001 synonymous SNV . 0 22 hPsi_associated_SNPs_22281 0 0 0 0 0 exosome 0.4387185930155 0.438718592995221 0 0 hPsi_site_16005 iPseU_CNN:0;iRNA_PseU:0 16006 chrX 35820637 35820637 1 + G A UCEC 35820636 + 35820616 35820656 41 TACATCAGACCCCAGGAATGTGCCCGCAGATGCTCTCGACC TACATCAGACCCCAGGAATGTACCCGCAGATGCTCTCGACC < 41bp 0.458176978380509 0.84840235560654 0.21938789 0.55571836 prediction 0.69680471121308 Functional Gain - MAGEB16 ENSG00000189023 CDS Human protein_coding chrX:35820636 chrX:35820637 synonymous SNV . 0 22 hPsi_associated_SNPs_22282 0 0 0 0 0 exosome 0.439297778819062 0.444808326833664 0.11143672 0 hPsi_site_16006 iPseU_CNN:0.11143672;iRNA_PseU:0 16007 chrX 130218327 130218327 1 + G A LUSC 130218326 + 130218306 130218346 41 AAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGT AAGATGAGTCTCAATCCGATTACGAAACAAATCCCCCAGGT < 41bp 0.54442827129674 0.892812413156583 0.47904423 0.86128795 prediction 0.696768283719684 Functional Gain - ARHGAP36 ENSG00000147256 CDS Human protein_coding chrX:130218326 chrX:130218327 nonsynonymous SNV 0.129 0 22 hPsi_associated_SNPs_22283 0 0 0 0 1 unknown 0.43972877392155 0.438761939587317 0.7225759 0 hPsi_site_16007 iPseU_CNN:0.7225759;iRNA_PseU:0 16008 chr11 45948887 45948887 1 + G A UCEC 45948886 + 45948866 45948906 41 GCTGCAGATGTTGGAAGCCCTGTGCAGGCACTGGCCTGGCC GCTGCAGATGTTGGAAGCCCTATGCAGGCACTGGCCTGGCC < 41bp 0.542638000209134 0.891012124580916 0.27096248 0.4635471 prediction 0.696748248743564 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45948886 chr11:45948887 synonymous SNV . 0 22 hPsi_associated_SNPs_22284 0 0 1 0 1 chromatin 0.438720408646085 0.438715305369295 0 0 hPsi_site_16008 iPseU_CNN:0;iRNA_PseU:0 16009 chr1 36748253 36748253 1 + C A LGG 36748252 + 36748232 36748272 41 GTTCTCGTTCATTTTCGAAGTCTCGGTCCCGAAGCCGATCT GTTCTCGTTCATTTTCGAAGTATCGGTCCCGAAGCCGATCT < 41bp 0.502456809652628 0.850818836505913 0.42789072 0.771474 prediction 0.69672405370657 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36748252 chr1:36748253 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22285 0 0 1 0 1 Nucleus 0.439922758623665 0.438703933176181 0.542948 0 hPsi_site_16009 iPseU_CNN:0.542948;iRNA_PseU:0 16010 chr1 90179638 90179638 1 + G A LUSC 90179637 + 90179617 90179657 41 GAGCGTCAAGTTTGATGACATGAGGGAACTCCCCCCCTGGA GAGCGTCAAGTTTGATGACATAAGGGAACTCCCCCCCTGGA < 41bp 0.519092088147169 0.867444018396293 0.19749826 0.3074788 prediction 0.696703860498249 Functional Gain - LRRC8C ENSG00000171488 CDS Human protein_coding chr1:90179637 chr1:90179638 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_22286 0 0 1 0 0 Endoplasmic reticulum 0.438658470086126 0.4387185919254 0 0 hPsi_site_16010 iPseU_CNN:0;iRNA_PseU:0 16011 chr16 90001717 90001717 1 + G A HNSC 90001716 + 90001696 90001736 41 GCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGA GCAGTACCGGGCCCTGACCGTACCCGAGCTCACCCAGCAGA < 41bp 0.541923356675893 0.890268961163578 0.23738718 0.7525984 prediction 0.696691208975371 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001716 chr16:90001717 synonymous SNV . 0 22 hPsi_associated_SNPs_22287 0 0 0 0 0 chromatin 0.438718416871308 0.438710707510059 0.5051968 0 hPsi_site_16011 iPseU_CNN:0.5051968;iRNA_PseU:0 16012 chr9 107267323 107267323 1 + G A SKCM 107267322 + 107267302 107267342 41 GACGGCTCTCTCCATGCACCTGAAGCCCTCCGCTGTAGATT GACGGCTCTCTCCATGCACCTAAAGCCCTCCGCTGTAGATT < 41bp 0.475330560567396 0.848342237282639 0.23437414 0.2947777 prediction 0.696684474565279 Functional Gain - OR13F1 ENSG00000186881 CDS Human protein_coding chr9:107267322 chr9:107267323 synonymous SNV . 0 22 hPsi_associated_SNPs_22288 0 0 0 0 0 unknown 0.438717569451024 0.43871845186066 0 0 hPsi_site_16012 iPseU_CNN:0;iRNA_PseU:0 16013 chrX 150154126 150154126 1 + C A UCEC 150154125 + 150154105 150154145 41 CAAGATGTCCGCTTATGCCTTCTTTGTGCAGACATGCAGAG CAAGATGTCCGCTTATGCCTTATTTGTGCAGACATGCAGAG < 41bp 0.495177400021226 0.848337919304788 0.2533395 0.32989764 prediction 0.696675838609576 Functional Gain - HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150154125 chrX:150154126 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22289 0 0 1 0 2 Ribosome 0.438688886565442 0.438840423411549 0 0 hPsi_site_16013 iPseU_CNN:0;iRNA_PseU:0 16014 chr17 26861801 26861801 1 + G A BRCA 26861800 + 26861780 26861820 41 GGGCTGTCCGCCCCCTGGGCTGTCCGGCTCAGGCCCCATCC GGGCTGTCCGCCCCCTGGGCTATCCGGCTCAGGCCCCATCC < 41bp 0.447769838817214 0.848337867319727 0.30288213 0.63314533 prediction 0.696675734639454 Functional Gain - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26861800 chr17:26861801 synonymous SNV . 0 22 hPsi_associated_SNPs_22290 0 0 0 0 1 exosome 0.438653705958895 0.43874565001795 0.26629066 0 hPsi_site_16014 iPseU_CNN:0.26629066;iRNA_PseU:0 16015 chr19 14150615 14150615 1 + G A BLCA 14150614 + 14150594 14150634 41 GACGTGGACTTTTCCGAGGATGACCCCCTGGAGGCCACTGT GACGTGGACTTTTCCGAGGATAACCCCCTGGAGGCCACTGT < 41bp 0.543156138008262 0.891493577542213 0.33208174 0.81065106 prediction 0.696674879067902 Functional Gain - IL27RA ENSG00000104998 CDS Human protein_coding chr19:14150614 chr19:14150615 nonsynonymous SNV 0.345 0 22 hPsi_associated_SNPs_22291 0 0 0 0 1 chromatin 0.43871488575058 0.438718649422576 0.62130212 0 hPsi_site_16015 iPseU_CNN:0.62130212;iRNA_PseU:0 16016 chr14 21570056 21570056 1 + G A COAD 21570055 + 21570035 21570075 41 ATGGCTGGCAGTGGTTGTGGTGCCCCTTGCTGTCTCAGTCG ATGGCTGGCAGTGGTTGTGGTACCCCTTGCTGTCTCAGTCG < 41bp 0.541147552295869 0.889483592410132 0.22149685 0.61628544 prediction 0.696672080228526 Functional Gain - TMEM253 ENSG00000232070 CDS Human protein_coding chr14:21570055 chr14:21570056 synonymous SNV . 0 22 hPsi_associated_SNPs_22292 0 0 0 0 2 exosome 0.438718720092239 0.438719737897245 0.23257088 0 hPsi_site_16016 iPseU_CNN:0.23257088;iRNA_PseU:0 16017 chr5 180377494 180377494 1 + G A BRCA 180377493 + 180377473 180377513 41 ATCCCAGAGACAAGCAACAGTGAGTCCTCCTCACAGGCAAC ATCCCAGAGACAAGCAACAGTAAGTCCTCCTCACAGGCAAC < 41bp 0.481644701504402 0.848336040054618 0.27137727 0.49337077 prediction 0.696672080109237 Functional Gain - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180377493 chr5:180377494 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_22293 0 0 0 0 0 chromatin 0.439498537647073 0.439103508721517 0 0 hPsi_site_16017 iPseU_CNN:0;iRNA_PseU:0 16018 chr10 102296378 102296378 1 + G A CESC 102296377 + 102296357 102296397 41 ATGAAATTTCATGAGTTCGTTGAGAAACTGCAGGATATACA ATGAAATTTCATGAGTTCGTTAAGAAACTGCAGGATATACA < 41bp 0.535310249759247 0.88363474173808 0.268565 0.35776195 prediction 0.696648983957667 Functional Gain - HIF1AN ENSG00000166135 CDS Human protein_coding chr10:102296377 chr10:102296378 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_22294 0 0 1 0 1 Ribosome 0.438844605583216 0.438719464685544 0 0 hPsi_site_16018 iPseU_CNN:0;iRNA_PseU:0 16019 chr5 35876163 35876163 1 + G A SKCM 35876162 + 35876142 35876182 41 GATGACATTCAAGCTAGAGATGAAGTGGAAGGTTTTCTGCA GATGACATTCAAGCTAGAGATAAAGTGGAAGGTTTTCTGCA < 41bp 0.467567191302982 0.848307681907683 0.25066411 0.29518023 prediction 0.696615363815366 Functional Gain - IL7R ENSG00000168685 CDS Human protein_coding chr5:35876162 chr5:35876163 nonsynonymous SNV 0.833 4 22 hPsi_associated_SNPs_22295 0 0 0 0 1 Endoplasmic reticulum 0.439097048863242 0.439144291839982 0 0 hPsi_site_16019 iPseU_CNN:0;iRNA_PseU:0 16020 chr1 171083292 171083292 1 + G A SARC 171083291 + 171083271 171083311 41 ATATTTGAGGGCATTGACTGTGTAATCTTTGCAACAGGGTA ATATTTGAGGGCATTGACTGTATAATCTTTGCAACAGGGTA < 41bp 0.451870731577616 0.848294525028641 0.24039313 0.35449505 prediction 0.696589050057282 Functional Gain - FMO3 ENSG00000007933 CDS Human protein_coding chr1:171083291 chr1:171083292 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_22296 0 0 0 0 0 exosome 0.438705678511254 0.438719079250024 0 0 hPsi_site_16020 iPseU_CNN:0;iRNA_PseU:0 16021 chr19 58563879 58563879 1 + G A UCEC 58563878 + 58563858 58563898 41 GCGTCTGAGCTGATTCTGGATGCAGTGGCAGCAGCCCCAGC GCGTCTGAGCTGATTCTGGATACAGTGGCAGCAGCCCCAGC < 41bp 0.455974078331874 0.848286120617384 0.29068202 0.32371956 prediction 0.696572241234769 Functional Gain - ZSCAN1 ENSG00000152467 CDS Human protein_coding chr19:58563878 chr19:58563879 nonsynonymous SNV 0.074 1 22 hPsi_associated_SNPs_22297 0 0 0 0 1 exosome 0.437780463913475 0.437445402343522 0 0 hPsi_site_16021 iPseU_CNN:0;iRNA_PseU:0 16022 chr19 18258277 18258277 1 + C A UCEC 18258276 + 18258256 18258296 41 GAAGTCACTTTTCAAGAAGATCTCCAAGCAGACCTCCGTGC GAAGTCACTTTTCAAGAAGATATCCAAGCAGACCTCCGTGC < 41bp 0.496765601864028 0.848272430237851 0.3364345 0.705085 prediction 0.696544860475702 Functional Gain - MAST3 ENSG00000099308 CDS Human protein_coding chr19:18258276 chr19:18258277 synonymous SNV . 0 22 hPsi_associated_SNPs_22298 0 0 0 0 1 Cytosol 0.438847918279749 0.438718802964229 0.41017 0 hPsi_site_16022 iPseU_CNN:0.41017;iRNA_PseU:0 16023 chr20 33578868 33578868 1 + C A LUAD 33578867 + 33578847 33578887 41 CAATGGGGTCCTGGAGGGGATCCGGATCTGCCGCCAAGGGT CAATGGGGTCCTGGAGGGGATACGGATCTGCCGCCAAGGGT < 41bp 0.496649351347326 0.848270885336923 0.47041202 0.73996097 prediction 0.696541770673847 Functional Gain - MYH7B ENSG00000078814 CDS Human protein_coding chr20:33578867 chr20:33578868 synonymous SNV . 0 22 hPsi_associated_SNPs_22299 0 0 0 0 2 chromatin 0.438718592591533 0.438718604434355 0.47992194 0 hPsi_site_16023 iPseU_CNN:0.47992194;iRNA_PseU:0 16024 chr15 43991212 43991212 1 + G A BLCA 43991211 + 43991191 43991231 41 CATCGATGGAGTAAACTATTTGATTGATTGTGAACGGCGTC CATCGATGGAGTAAACTATTTAATTGATTGTGAACGGCGTC < 41bp 0.457488902253742 0.848266422080612 0.3047064 0.68357944 prediction 0.696532844161223 Functional Gain - CKMT1A ENSG00000223572 CDS Human protein_coding chr15:43991211 chr15:43991212 synonymous SNV . 0 22 hPsi_associated_SNPs_22300 0 0 0 0 1 exosome 0.438714546676588 0.438718887556057 0.36715888 0 hPsi_site_16024 iPseU_CNN:0.36715888;iRNA_PseU:0 16025 chr1 212798999 212798999 1 + C T STAD 212799000 - 212798980 212799020 41 AGCAAGTTCTGTAGATGTTTTGGGGATGGATGCATTGAGCA AGCAAGTTCTGTAGATGTTTTAGGGATGGATGCATTGAGCA < 41bp 0.493760081572688 0.848264653581075 0.6081314 0.64426106 prediction 0.69652930716215 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212799000 chr1:212798999 synonymous SNV . 0 22 hPsi_associated_SNPs_22301 0 0 0 0 0 exosome 0.438718593041053 0.438718860516937 0.0722593200000001 0 hPsi_site_16025 iPseU_CNN:0.0722593200000001;iRNA_PseU:0 16026 chr17 45994053 45994053 1 + G A UCEC 45994052 + 45994032 45994072 41 AATGTGGTGAAGCTGACAGGTGGGGGCGGCAATGTGACGCT AATGTGGTGAAGCTGACAGGTAGGGGCGGCAATGTGACGCT < 41bp 0.433105959685609 0.848259523481524 0.287135 0.6466595 prediction 0.696519046963049 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:45994052 chr17:45994053 nonsynonymous SNV 0.972 2 22 hPsi_associated_SNPs_22302 0 0 0 0 0 Cytosol 0.438718797005463 0.438718625888468 0.293319 0 hPsi_site_16026 iPseU_CNN:0.293319;iRNA_PseU:0 16027 chr12 22208195 22208195 1 + G A PRAD 22208194 + 22208174 22208214 41 GACAGCTCTACCTCACTAGATGCCATCATAGAATTTCTTAA GACAGCTCTACCTCACTAGATACCATCATAGAATTTCTTAA < 41bp 0.466394380867318 0.848257463287288 0.18262699 0.24812853 prediction 0.696514926574576 Functional Gain - CMAS ENSG00000111726 CDS Human protein_coding chr12:22208194 chr12:22208195 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22303 0 0 1 2 1 Ribosome 0.438879687647108 0.438730404480226 0 0 hPsi_site_16027 iPseU_CNN:0;iRNA_PseU:0 16028 chr17 72301457 72301457 1 + C T OV 72301458 - 72301438 72301478 41 GGGCGTAGATGGGGCCATGATGGCCCGGGAAGGTGCACACA GGGCGTAGATGGGGCCATGATAGCCCGGGAAGGTGCACACA < 41bp 0.468978236075946 0.848253823389002 0.115535885 0.1959314 prediction 0.696507646778003 Functional Gain - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72301458 chr17:72301457 nonsynonymous SNV 0.933 2 22 hPsi_associated_SNPs_22304 0 0 0 0 0 exosome 0.438718583159529 0.43871859006619 0 0 hPsi_site_16028 iPseU_CNN:0;iRNA_PseU:0 16029 chr17 80400394 80400394 1 + G A BLCA 80400393 + 80400373 80400413 41 TCTTGCCCACACTCAGTTCCTGAGGGCCCTGGGCAGCCCCT TCTTGCCCACACTCAGTTCCTAAGGGCCCTGGGCAGCCCCT < 41bp 0.518721202039947 0.8669707504738 0.28114927 0.4017058 prediction 0.696499096867706 Functional Gain - HEXDC ENSG00000169660 CDS Human protein_coding chr17:80400393 chr17:80400394 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_22305 0 0 1 1 0 Ribosome 0.438820264186282 0.438718592995858 0 0 hPsi_site_16029 iPseU_CNN:0;iRNA_PseU:0 16030 chr17 38991560 38991560 1 + G A rs201102145 38991559 + 38991539 38991579 41 AACATAAGGTACCTTATCATTGTCAGCCTTCATCTCCTGAT AACATAAGGTACCTTATCATTATCAGCCTTCATCTCCTGAT < 41bp 0.493491394825422 0.848248535244192 0.45426357 0.49064237 prediction 0.696497070488385 Functional Gain - TMEM99 ENSG00000167920 UTR3 Human protein_coding chr17:38991559 chr17:38991560 . . 0 22 hPsi_associated_SNPs_22306 0 0 0 3 0 Ribosome 0.437674704792147 0.438302456490684 0 0 hPsi_site_16030 iPseU_CNN:0;iRNA_PseU:0 16031 chr2 169940033 169940033 1 + G A STAD 169940032 + 169940012 169940052 41 TCCAGTGTTGGAGGTCGCCTTGCAATCGTTGGAGGGGGCTA TCCAGTGTTGGAGGTCGCCTTACAATCGTTGGAGGGGGCTA < 41bp 0.536010710330141 0.884250400059604 0.50603837 0.6971249 prediction 0.696479379458927 Functional Gain - DHRS9 ENSG00000073737 CDS Human protein_coding chr2:169940032 chr2:169940033 nonsynonymous SNV 0.976 2 22 hPsi_associated_SNPs_22307 0 0 0 0 1 exosome 0.438718594512245 0.438718598674588 0.38217306 0 hPsi_site_16031 iPseU_CNN:0.38217306;iRNA_PseU:0 16032 chr16 50745896 50745896 1 + G A BLCA 50745895 + 50745875 50745915 41 GAGCACTGGGGCCTGCTGGCTGAGTGCCAGACATCTGAGAA GAGCACTGGGGCCTGCTGGCTAAGTGCCAGACATCTGAGAA < 41bp 0.466515122307066 0.848232059966458 0.20924848 0.6704567 prediction 0.696464119932916 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50745895 chr16:50745896 nonsynonymous SNV 0.212 0 22 hPsi_associated_SNPs_22308 0 0 0 2 0 exosome 0.438756650747588 0.436885686112305 0.3409134 0 hPsi_site_16032 iPseU_CNN:0.3409134;iRNA_PseU:0 16033 chr17 7950251 7950251 1 + C A UCEC 7950250 + 7950230 7950270 41 AGGCATCGGCATTGAAGGCTTCTCTGAGTTGATACAGAGGA AGGCATCGGCATTGAAGGCTTATCTGAGTTGATACAGAGGA < 41bp 0.50025499061656 0.848477544681712 0.41097936 0.5723029 prediction 0.696445108130305 Functional Gain - ALOX15B ENSG00000179593 CDS Human protein_coding chr17:7950250 chr17:7950251 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_22309 0 0 0 0 1 exosome 0.457780920905199 0.43860087072246 0.1446058 0 hPsi_site_16033 iPseU_CNN:0.1446058;iRNA_PseU:0 16034 chr1 151259741 151259741 1 + C A HNSC 151259740 + 151259720 151259760 41 ACTCCCCTGCCTCCAGCTCCTCTAGGCCTCTTAAGGTGCGG ACTCCCCTGCCTCCAGCTCCTATAGGCCTCTTAAGGTGCGG < 41bp 0.499067594207253 0.848213932126915 0.33245793 0.40197563 prediction 0.69642786425383 Functional Gain - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151259740 chr1:151259741 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22310 0 0 1 0 0 chromatin 0.438718617878498 0.438718592978419 0 0 hPsi_site_16034 iPseU_CNN:0;iRNA_PseU:0 16035 chr5 140559274 140559274 1 + G A SKCM 140559273 + 140559253 140559293 41 GCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGC GCTGGTGCGCGTGCTGGTGCTAGACGCCAACGACAACTCGC < 41bp 0.533833414929811 0.882036143792649 0.20704317 0.82559246 prediction 0.696405457725677 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140559273 chr5:140559274 synonymous SNV . 0 22 hPsi_associated_SNPs_22311 0 0 0 0 0 exosome 0.431718541576324 0.436366319865895 0.65118492 0 hPsi_site_16035 iPseU_CNN:0.65118492;iRNA_PseU:0 16036 chr2 48026133 48026133 1 + G A LUSC 48026132 + 48026112 48026152 41 ATCAGAAACCAAGAATACTTTGAGAGCTTTCTCTGCCCCTC ATCAGAAACCAAGAATACTTTAAGAGCTTTCTCTGCCCCTC < 41bp 0.457360841377834 0.848202594425734 0.28514725 0.35264537 prediction 0.696405188851468 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026132 chr2:48026133 synonymous SNV . 0 22 hPsi_associated_SNPs_22312 0 0 1 0 0 Nucleus 0.438722554868093 0.438718650105267 0 0 hPsi_site_16036 iPseU_CNN:0;iRNA_PseU:0 16037 chr9 130575653 130575653 1 + G A PAAD 130575652 + 130575632 130575672 41 CACCCACCCCACACCTGCAGTGCCAGCTCCCTCGTCTTCAG CACCCACCCCACACCTGCAGTACCAGCTCCCTCGTCTTCAG < 41bp 0.450345136492903 0.848200101986866 0.3059752 0.38946578 prediction 0.696400203973732 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130575652 chr9:130575653 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_22313 0 0 1 0 0 Cytosol 0.43871877570136 0.438718392333424 0 0 hPsi_site_16037 iPseU_CNN:0;iRNA_PseU:0 16038 chr1 22333420 22333420 1 + G A UCEC 22333419 + 22333399 22333439 41 CGCAGCGCCCAGCTGGGAGATGCCGTCCAGCTCGCCTCACT CGCAGCGCCCAGCTGGGAGATACCGTCCAGCTCGCCTCACT < 41bp 0.537526901945246 0.885720763028122 0.47839227 0.8175217 prediction 0.696387722165752 Functional Gain - CELA3A ENSG00000142789 CDS Human protein_coding chr1:22333419 chr1:22333420 nonsynonymous SNV 0.285 1 22 hPsi_associated_SNPs_22314 0 0 0 0 2 Endoplasmic reticulum 0.438749139560281 0.438719812173104 0.6350434 0 hPsi_site_16038 iPseU_CNN:0.6350434;iRNA_PseU:0 16039 chrX 128695246 128695246 1 + G A UCEC 128695245 + 128695225 128695265 41 CATGGCTGTAGAGAGAGGTTTGCATTCCAAAGCCAAGTATA CATGGCTGTAGAGAGAGGTTTACATTCCAAAGCCAAGTATA < 41bp 0.454518107118019 0.848187477504095 0.5044315 0.7505285 prediction 0.696374955008189 Functional Gain - OCRL ENSG00000122126 CDS Human protein_coding chrX:128695245 chrX:128695246 synonymous SNV . 0 22 hPsi_associated_SNPs_22315 0 0 1 0 2 Cytosol 0.43546376867414 0.438731055930981 0.492194 0 hPsi_site_16039 iPseU_CNN:0.492194;iRNA_PseU:0 16040 chr7 148921393 148921393 1 + G A STAD 148921392 + 148921372 148921412 41 AGTGCGAGAAGAGCTTCAACTGCCACTCGGGCCTCATCCGC AGTGCGAGAAGAGCTTCAACTACCACTCGGGCCTCATCCGC < 41bp 0.458427891031994 0.848184627727124 0.1948683 0.5136185 prediction 0.696369255454249 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921392 chr7:148921393 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22316 0 0 1 0 1 Cytosol 0.43871611013624 0.438697828472646 0.027237 0 hPsi_site_16040 iPseU_CNN:0.027237;iRNA_PseU:0 16041 chr19 55420786 55420786 1 + G A LUSC 55420785 + 55420765 55420805 41 GCGGAGTTCCCCCTGGGCCCTGTGACCACAGCCCACCGAGG GCGGAGTTCCCCCTGGGCCCTATGACCACAGCCCACCGAGG < 41bp 0.44195201977427 0.848180757385428 0.21530521 0.26467514 prediction 0.696361514770856 Functional Gain - NCR1 ENSG00000189430 CDS Human protein_coding chr19:55420785 chr19:55420786 nonsynonymous SNV 0.070 3 22 hPsi_associated_SNPs_22317 0 0 0 0 1 exosome 0.438718592995102 0.4387185929951 0 0 hPsi_site_16041 iPseU_CNN:0;iRNA_PseU:0 16042 chr12 7457016 7457016 1 + G A SKCM 7457015 + 7456995 7457035 41 TACACAAAGATCACCAGCTTTGGACGCCTCTGACTCTTGCT TACACAAAGATCACCAGCTTTAGACGCCTCTGACTCTTGCT < 41bp 0.476629772984376 0.848176986523669 0.49734586 0.8283659 prediction 0.696353973047339 Functional Gain - ACSM4 ENSG00000215009 CDS Human protein_coding chr12:7457015 chr12:7457016 stopgain 0.026 0 22 hPsi_associated_SNPs_22318 0 0 0 0 0 exosome 0.438008587972429 0.438422428715274 0.6567318 0 hPsi_site_16042 iPseU_CNN:0.6567318;iRNA_PseU:0 16043 chr5 1244820 1244820 1 + G A UCEC 1244819 + 1244799 1244839 41 CCCCTGCTGCTGACCATCTTTGTGGCTTACATCATCCTCCT CCCCTGCTGCTGACCATCTTTATGGCTTACATCATCCTCCT < 41bp 0.531265556216141 0.879413421524952 0.43684164 0.43607157 prediction 0.696295730617623 Functional Gain - SLC6A18 ENSG00000164363 CDS Human protein_coding chr5:1244819 chr5:1244820 nonsynonymous SNV 0.016 1 22 hPsi_associated_SNPs_22319 0 0 0 0 2 unknown 0.438718593028797 0.438718592966577 0 0 hPsi_site_16043 iPseU_CNN:0;iRNA_PseU:0 16044 chr4 184940986 184940986 1 + G A rs142240097 184940985 + 184940965 184941005 41 AGCCGGCAGCACATTGCAAATGTCATTCGAGGTCACGGTGA AGCCGGCAGCACATTGCAAATATCATTCGAGGTCACGGTGA < 41bp 0.515133875135467 0.863243288245687 0.44381452 0.69583267 prediction 0.69621882622044 Functional Gain - STOX2 ENSG00000173320 UTR3 Human protein_coding chr4:184940985 chr4:184940986 . . 0 22 hPsi_associated_SNPs_22320 0 0 0 0 0 exosome 0.438669816492292 0.438656506172741 0.39166534 0 hPsi_site_16044 iPseU_CNN:0.39166534;iRNA_PseU:0 16045 chr19 57133136 57133136 1 + G A PAAD 57133135 + 57133115 57133155 41 GGAGAAAAGCCGTTTGAGTGTGACACCTGTGGGAAGCACTT GGAGAAAAGCCGTTTGAGTGTAACACCTGTGGGAAGCACTT < 41bp 0.450681130654267 0.848106635352101 0.34418905 0.5669674 prediction 0.696213270704203 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133135 chr19:57133136 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_22321 0 0 1 0 0 exosome 0.438718589767921 0.438711964278225 0.1339348 0 hPsi_site_16045 iPseU_CNN:0.1339348;iRNA_PseU:0 16046 chr6 26465477 26465477 1 + G A GBM 26465476 + 26465456 26465496 41 TATCATTGTGGTTATTCTGATGATACCCATTGCCGTATGCA TATCATTGTGGTTATTCTGATAATACCCATTGCCGTATGCA < 41bp 0.454899320708083 0.848099519600807 0.29451036 0.47253108 prediction 0.696199039201614 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26465476 chr6:26465477 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22322 0 0 1 0 1 Endoplasmic reticulum 0.438751547566986 0.438713597962523 0 0 hPsi_site_16046 iPseU_CNN:0;iRNA_PseU:0 16047 chr11 92715302 92715302 1 + G A LUSC 92715301 + 92715281 92715321 41 TATTTCAACAGCTGCCTGAATGCCATTGTCTATGGGCTCTT TATTTCAACAGCTGCCTGAATACCATTGTCTATGGGCTCTT < 41bp 0.465719557191471 0.84809721992522 0.3032871 0.6160365 prediction 0.696194439850439 Functional Gain - MTNR1B ENSG00000134640 CDS Human protein_coding chr11:92715301 chr11:92715302 nonsynonymous SNV 0.884 3 22 hPsi_associated_SNPs_22323 0 0 0 0 0 unknown 0.438718599253703 0.438731461296468 0.232073 0 hPsi_site_16047 iPseU_CNN:0.232073;iRNA_PseU:0 16048 chr11 124015985 124015985 1 + C A UCEC 124015984 + 124015964 124016004 41 GGCCACCATCCTGGCCGTGATCTGGCTGCACAGCAATGGTA GGCCACCATCCTGGCCGTGATATGGCTGCACAGCAATGGTA < 41bp 0.49636523623232 0.848085194747324 0.2206203 0.30427074 prediction 0.696170389494647 Functional Gain - VWA5A ENSG00000110002 CDS Human protein_coding chr11:124015984 chr11:124015985 synonymous SNV . 0 22 hPsi_associated_SNPs_22324 0 0 0 0 2 nucleus 0.438772678248147 0.438376504870554 0 0 hPsi_site_16048 iPseU_CNN:0;iRNA_PseU:0 16049 chr21 37785214 37785214 1 + C A SKCM 37785213 + 37785193 37785233 41 GTGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCA GTGCCTTCCTGGCCATTTCTTACACGGACGGTTACTGCTCA < 41bp 0.499809115016445 0.848083936029949 0.32069573 0.6398646 prediction 0.696167872059898 Functional Gain - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785213 chr21:37785214 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22325 0 0 1 0 1 Ribosome 0.438718577321755 0.439688098698378 0.2797292 0 hPsi_site_16049 iPseU_CNN:0.2797292;iRNA_PseU:0 16050 chr22 31522677 31522677 1 + G A SKCM 31522676 + 31522656 31522696 41 CCAGTGGAGTGAGCTGTTCATGGATGCGCTAGGGCCCTTCA CCAGTGGAGTGAGCTGTTCATAGATGCGCTAGGGCCCTTCA < 41bp 0.446030361550241 0.848083141895132 0.23416299 0.42700082 prediction 0.696166283790263 Functional Gain - INPP5J ENSG00000185133 CDS Human protein_coding chr22:31522676 chr22:31522677 nonsynonymous SNV 0.980 2 22 hPsi_associated_SNPs_22326 0 0 0 0 2 Cytosol 0.438718592995108 0.438714602392072 0 0 hPsi_site_16050 iPseU_CNN:0;iRNA_PseU:0 16051 chr5 179251006 179251006 1 + G A OV 179251005 + 179250985 179251025 41 CGTCTGCCCAGACTACGACTTGTGTAGCGTCTGCGAGGGAA CGTCTGCCCAGACTACGACTTATGTAGCGTCTGCGAGGGAA < 41bp 0.547434467488662 0.895515241943666 0.2869165 0.5055918 prediction 0.696161548910008 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179251005 chr5:179251006 synonymous SNV . 0 22 hPsi_associated_SNPs_22327 0 0 1 0 1 Ribosome 0.438729549509867 0.438719697592303 0.0111836000000001 0 hPsi_site_16051 iPseU_CNN:0.0111836000000001;iRNA_PseU:0 16052 chr5 96329598 96329598 1 + C A GBM 96329597 + 96329577 96329617 41 ACCTTCCGAGAGGAGACACTTCTGTATGACAGTAACACTTC ACCTTCCGAGAGGAGACACTTATGTATGACAGTAACACTTC < 41bp 0.507303352854208 0.855377436031096 0.21211058 0.2754916 prediction 0.696148166353776 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96329597 chr5:96329598 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_22328 0 0 1 0 2 Endoplasmic reticulum 0.43922442549275 0.438736040610837 0 0 hPsi_site_16052 iPseU_CNN:0;iRNA_PseU:0 16053 chr15 49620279 49620279 1 + G A UCEC 49620278 + 49620258 49620298 41 GCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAA GCTTATTACCAGAGGAGTGATAGAAGCTTAGCACCGGAGAA < 41bp 0.469154384892896 0.848063755778252 0.2223348 0.2608462 prediction 0.696127511556505 Functional Gain - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49620278 chr15:49620279 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22329 0 0 1 0 0 Nucleus 0.438718592994922 0.438718559066501 0 0 hPsi_site_16053 iPseU_CNN:0;iRNA_PseU:0 16054 chr7 128482910 128482910 1 + G A HNSC 128482909 + 128482889 128482929 41 GGCCCTGCAGAGGCTGACATTGACTTCGACATCATCAAGAA GGCCCTGCAGAGGCTGACATTAACTTCGACATCATCAAGAA < 41bp 0.453884839196674 0.848060480443273 0.24151862 0.30443653 prediction 0.696120960886546 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128482909 chr7:128482910 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_22330 0 0 0 0 2 chromatin 0.438723803344136 0.438718604674249 0 0 hPsi_site_16054 iPseU_CNN:0;iRNA_PseU:0 16055 chr8 22865579 22865579 1 + G A LUAD 22865578 + 22865558 22865598 41 GATTTCCAGCTGTGACTGGATGGCTGCCATGTTTGGGGGGC GATTTCCAGCTGTGACTGGATAGCTGCCATGTTTGGGGGGC < 41bp 0.542851873646933 0.890882263788637 0.31679374 0.6229247 prediction 0.696060780283408 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22865578 chr8:22865579 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22331 0 0 0 0 2 cytosol 0.438718554629968 0.434601730173711 0.2458494 0 hPsi_site_16055 iPseU_CNN:0.2458494;iRNA_PseU:0 16056 chr6 26452532 26452532 1 + G A SKCM 26452531 + 26452511 26452551 41 GAAAGTGGGGAGCCTCAGGCTGAAGTAACATCTCTGCTTCT GAAAGTGGGGAGCCTCAGGCTAAAGTAACATCTCTGCTTCT < 41bp 0.463219247133194 0.848029630398457 0.33478737 0.6221875 prediction 0.696059260796914 Functional Gain - BTN3A3 ENSG00000111801 CDS Human protein_coding chr6:26452531 chr6:26452532 nonsynonymous SNV 0.030 0 22 hPsi_associated_SNPs_22332 0 0 0 0 0 Endoplasmic reticulum 0.438718050469321 0.438719609261422 0.244375 0 hPsi_site_16056 iPseU_CNN:0.244375;iRNA_PseU:0 16057 chr15 96877417 96877417 1 + G A UCEC 96877416 + 96877396 96877436 41 GTCCGGATATATTTCCCTGCTGTTGCGCGCGGAGCCCTATC GTCCGGATATATTTCCCTGCTATTGCGCGCGGAGCCCTATC < 41bp 0.446478096973363 0.848028275274353 0.18824717 0.31983745 prediction 0.696056550548706 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877416 chr15:96877417 synonymous SNV . 0 22 hPsi_associated_SNPs_22333 0 0 1 0 0 Cytoplasm 0.438725768489801 0.438716910984313 0 0 hPsi_site_16057 iPseU_CNN:0;iRNA_PseU:0 16058 chr2 39944200 39944200 1 + G A STAD 39944199 + 39944179 39944219 41 TATGCCGCCAGTATCTCGTATGATTTGAACCGGCTCCCAAA TATGCCGCCAGTATCTCGTATAATTTGAACCGGCTCCCAAA < 41bp 0.459093781225357 0.848017252462909 0.38471645 0.5653411 prediction 0.696034504925818 Functional Gain - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39944199 chr2:39944200 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_22334 0 0 0 0 1 exosome 0.438708177324199 0.438718591132334 0.1306822 0 hPsi_site_16058 iPseU_CNN:0.1306822;iRNA_PseU:0 16059 chr16 50756591 50756591 1 + G A SKCM 50756590 + 50756570 50756610 41 GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG GCCCTGGCTGAAGCCTTGGGTAATCACCAGAGCTTGAGGTG < 41bp 0.456117227764516 0.848016708058995 0.1923089 0.71475685 prediction 0.696033416117989 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50756590 chr16:50756591 nonsynonymous SNV 0.550 0 22 hPsi_associated_SNPs_22335 0 0 0 0 2 exosome 0.438634866346412 0.437306715161284 0.4295137 0 hPsi_site_16059 iPseU_CNN:0.4295137;iRNA_PseU:0 16060 chr7 99156457 99156457 1 + G A rs532434437 99156456 + 99156436 99156476 41 GTCGCAGCGGGGTGGCAGCTTGTTTTGCCTTCACGGGAGTA GTCGCAGCGGGGTGGCAGCTTATTTTGCCTTCACGGGAGTA < 41bp 0.498271705690121 0.848016172411364 0.56467086 0.61274034 prediction 0.696032344822728 Functional Gain - ZNF655 ENSG00000197343 UTR5 Human protein_coding chr7:99156456 chr7:99156457 . . 0 22 hPsi_associated_SNPs_22336 0 0 1 0 0 Cytosol 0.438509489518888 0.438714820368476 0.09613896 0 hPsi_site_16060 iPseU_CNN:0.09613896;iRNA_PseU:0 16061 chr7 130138042 130138042 1 + G A SKCM 130138041 + 130138021 130138061 41 GGAAGCGCTTTTGCGGCATCTGGGGCTCCAGAACCGCAGGA GGAAGCGCTTTTGCGGCATCTAGGGCTCCAGAACCGCAGGA < 41bp 0.441160067372529 0.847998204778477 0.20565546 0.33253247 prediction 0.695996409556955 Functional Gain - MEST ENSG00000106484 CDS Human protein_coding chr7:130138041 chr7:130138042 synonymous SNV . 0 22 hPsi_associated_SNPs_22337 0 0 1 0 2 Ribosome 0.438718592995103 0.438718594785843 0 0 hPsi_site_16061 iPseU_CNN:0;iRNA_PseU:0 16062 chr17 61613335 61613335 1 + C A COAD 61613334 + 61613314 61613354 41 GTATGTCACAGCCCTCTACTTCACCTTCAGCAGCCTCACCA GTATGTCACAGCCCTCTACTTAACCTTCAGCAGCCTCACCA < 41bp 0.506672451881549 0.854668363335874 0.18778792 0.28671145 prediction 0.69599182290865 Functional Gain - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61613334 chr17:61613335 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22338 0 0 0 0 1 unknown 0.438718646626375 0.438718597191639 0 0 hPsi_site_16062 iPseU_CNN:0;iRNA_PseU:0 16063 chr22 27024363 27024363 1 + G A SKCM 27024362 + 27024342 27024382 41 GCCATGGGATGGGAAGGCAATGAAGTAGGGTCCTTCCACGT GCCATGGGATGGGAAGGCAATAAAGTAGGGTCCTTCCACGT < 41bp 0.545620987009744 0.893615062575983 0.35649812 0.6624686 prediction 0.695988151132477 Functional Gain - CRYBA4 ENSG00000196431 CDS Human protein_coding chr22:27024362 chr22:27024363 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_22339 0 0 0 0 1 Cytosol 0.438718592995028 0.438718592995273 0.3249372 0 hPsi_site_16063 iPseU_CNN:0.3249372;iRNA_PseU:0 16064 chr3 148714240 148714240 1 + G A OV 148714239 + 148714219 148714259 41 CTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATAC CTTACACAGTATTCAAAATGTATATTCATGGATGCAGATAC < 41bp 0.534589013784313 0.882582559053323 0.32089347 0.3717565 prediction 0.695987090538021 Functional Gain - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148714239 chr3:148714240 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22340 0 0 0 0 1 Cytosol 0.438686864831421 0.43872116492421 0 0 hPsi_site_16064 iPseU_CNN:0;iRNA_PseU:0 16065 chr2 220368810 220368810 1 + G A rs181901772 220368809 + 220368789 220368829 41 CCTGCTCTGTCCTCAGGTATTGCACTATGTGGAGAAACCCA CCTGCTCTGTCCTCAGGTATTACACTATGTGGAGAAACCCA < 41bp 0.449996686292022 0.847989247455697 0.27567714 0.36923015 prediction 0.695978494911394 Functional Gain - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220368809 chr2:220368810 synonymous SNV . 0 22 hPsi_associated_SNPs_22341 0 0 1 5 1 Ribosome 0.438709575170223 0.438971481205352 0 0 hPsi_site_16065 iPseU_CNN:0;iRNA_PseU:0 16066 chr3 9979321 9979321 1 + G A BLCA 9979320 + 9979300 9979340 41 GTGCCACCGCCTGCTGGAGCTGAGTGAGGAGCTGGTGGAGA GTGCCACCGCCTGCTGGAGCTAAGTGAGGAGCTGGTGGAGA < 41bp 0.439571155415559 0.847985120156266 0.18579018 0.38031906 prediction 0.695970240312531 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9979320 chr3:9979321 synonymous SNV . 0 22 hPsi_associated_SNPs_22342 0 0 1 0 2 chromatin 0.439669512971977 0.438716973698422 0 0 hPsi_site_16066 iPseU_CNN:0;iRNA_PseU:0 16067 chr1 93581068 93581068 1 + G A UCEC 93581067 + 93581047 93581087 41 AGGACCAAATGCCAAAGCATTGCAAGTCATGAAGCAGACAT AGGACCAAATGCCAAAGCATTACAAGTCATGAAGCAGACAT < 41bp 0.467095128445839 0.847983120045141 0.38677713 0.7296112 prediction 0.695966240090282 Functional Gain - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93581067 chr1:93581068 synonymous SNV . 0 22 hPsi_associated_SNPs_22343 0 0 1 0 1 Cytosol 0.437663280804745 0.438685988512787 0.4592224 0 hPsi_site_16067 iPseU_CNN:0.4592224;iRNA_PseU:0 16068 chr11 73681135 73681135 1 + G A rs72982975 73681134 + 73681114 73681154 41 CACACCCCAGAAGAAGCAGATGCTGCGCCAGGCATTGCTGA CACACCCCAGAAGAAGCAGATACTGCGCCAGGCATTGCTGA < 41bp 0.448474916131004 0.847982562161463 0.2585205 0.5975992 prediction 0.695965124322926 Functional Gain - DNAJB13 ENSG00000187726 CDS Human protein_coding chr11:73681134 chr11:73681135 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22344 0 0 0 0 0 exosome 0.438718593141591 0.438718593034474 0.1951984 0 hPsi_site_16068 iPseU_CNN:0.1951984;iRNA_PseU:0 16069 chr5 140530480 140530480 1 + G A SKCM 140530479 + 140530459 140530499 41 CAGGCTAACGCTGATCGCGCTGGATGGCGGGTCTCCGCCCC CAGGCTAACGCTGATCGCGCTAGATGGCGGGTCTCCGCCCC < 41bp 0.464500662061059 0.847982429496545 0.23706773 0.363465 prediction 0.69596485899309 Functional Gain - PCDHB6 ENSG00000113211 CDS Human protein_coding chr5:140530479 chr5:140530480 synonymous SNV . 0 22 hPsi_associated_SNPs_22345 0 0 0 0 0 exosome 0.438718023483763 0.438718593000634 0 0 hPsi_site_16069 iPseU_CNN:0;iRNA_PseU:0 16070 chr20 44506879 44506879 1 + G A LUSC 44506878 + 44506858 44506898 41 AACAATGGTACCACCTGCCATGCCGACACATTTTGGCTCTG AACAATGGTACCACCTGCCATACCGACACATTTTGGCTCTG < 41bp 0.534693314831479 0.882664835220703 0.34412897 0.7741256 prediction 0.695943040778448 Functional Gain - ZSWIM3 ENSG00000132801 CDS Human protein_coding chr20:44506878 chr20:44506879 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22346 0 0 0 0 0 Cytosol 0.437138214134362 0.438721570017257 0.5482512 0 hPsi_site_16070 iPseU_CNN:0.5482512;iRNA_PseU:0 16071 chr5 64875253 64875253 1 + G A COAD 64875252 + 64875232 64875272 41 AACATTGTTATATTTTTAGGTGTGTGCGGATTTTAGGCAAA AACATTGTTATATTTTTAGGTATGTGCGGATTTTAGGCAAA < 41bp 0.470499901101968 0.847968721434884 0.3232819 0.7014903 prediction 0.695937442869768 Functional Gain - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64875252 chr5:64875253 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22347 0 0 1 0 1 chromatin 0.43871859300405 0.438718593117161 0.4029806 0 hPsi_site_16071 iPseU_CNN:0.4029806;iRNA_PseU:0 16072 chr16 89590431 89590431 1 + G A BLCA 89590430 + 89590410 89590450 41 TCAGAGGAGAGGAGACGCCGTGAGCGGGACGACCAGATGTA TCAGAGGAGAGGAGACGCCGTAAGCGGGACGACCAGATGTA < 41bp 0.446045261975803 0.847957740221576 0.17563438 0.296198 prediction 0.695915480443152 Functional Gain - SPG7 ENSG00000197912 CDS Human protein_coding chr16:89590430 chr16:89590431 nonsynonymous SNV 0.026 2 22 hPsi_associated_SNPs_22348 0 0 1 0 1 Nucleus 0.431272984163154 0.438722648920083 0 0 hPsi_site_16072 iPseU_CNN:0;iRNA_PseU:0 16073 chr3 49568328 49568328 1 + G A rs143829263 49568327 + 49568307 49568347 41 CCTTGACACTGATAAGGGTGTGCATTACATTTCAGTGAGCG CCTTGACACTGATAAGGGTGTACATTACATTTCAGTGAGCG < 41bp 0.524339492243954 0.872296173336335 0.29766434 0.62970793 prediction 0.695913362184761 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568327 chr3:49568328 synonymous SNV . 0 22 hPsi_associated_SNPs_22349 0 0 1 0 1 Nucleus 0.438719353305379 0.438900386251684 0.25941586 0 hPsi_site_16073 iPseU_CNN:0.25941586;iRNA_PseU:0 16074 chr18 56887527 56887527 1 + G A rs562856652 56887526 + 56887506 56887546 41 CCGTGAGCTCCCGCTGGTCCTGCTGGCGCTGGTCCTCTGCC CCGTGAGCTCCCGCTGGTCCTACTGGCGCTGGTCCTCTGCC < 41bp 0.476642084051114 0.847952847101472 0.29008096 0.81652457 prediction 0.695905694202944 Functional Gain - GRP ENSG00000134443 CDS Human protein_coding chr18:56887526 chr18:56887527 synonymous SNV . 0 22 hPsi_associated_SNPs_22350 0 0 0 0 0 unknown 0.439488920979736 0.439758579348907 0.63304914 0 hPsi_site_16074 iPseU_CNN:0.63304914;iRNA_PseU:0 16075 chr14 94395153 94395153 1 + G A SKCM 94395152 + 94395132 94395172 41 TAAGAAAAATTGCAAGGGCTTGGAGCCCCTGGGACCTGAGA TAAGAAAAATTGCAAGGGCTTAGAGCCCCTGGGACCTGAGA < 41bp 0.536026807628445 0.883977962412302 0.44700944 0.7160846 prediction 0.695902309567714 Functional Gain - FAM181A ENSG00000140067 CDS Human protein_coding chr14:94395152 chr14:94395153 synonymous SNV . 0 22 hPsi_associated_SNPs_22351 0 0 0 0 0 exosome 0.438718592106718 0.438718584256769 0.4321692 0 hPsi_site_16075 iPseU_CNN:0.4321692;iRNA_PseU:0 16076 chr20 17581618 17581618 1 + G A LUSC 17581617 + 17581597 17581637 41 GAATGCTTCCTGAAAAAGATTGTCGCTATGCTTTGTATGAT GAATGCTTCCTGAAAAAGATTATCGCTATGCTTTGTATGAT < 41bp 0.536580858247336 0.884526305136682 0.28353047 0.4919066 prediction 0.695890893778693 Functional Gain - DSTN ENSG00000125868 CDS Human protein_coding chr20:17581617 chr20:17581618 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22352 0 0 1 0 1 Ribosome 0.438719851736572 0.438719968681083 0 0 hPsi_site_16076 iPseU_CNN:0;iRNA_PseU:0 16077 chr5 176301026 176301026 1 + G A UCEC 176301025 + 176301005 176301045 41 GCCTCATCGCCGTGGCCGTCTGCCTGGTCCTGCTGCTGCTT GCCTCATCGCCGTGGCCGTCTACCTGGTCCTGCTGCTGCTT < 41bp 0.439462075590804 0.847944584678814 0.24011609 0.38666385 prediction 0.695889169357627 Functional Gain - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176301025 chr5:176301026 nonsynonymous SNV 0.325 2 22 hPsi_associated_SNPs_22353 0 0 0 0 1 exosome 0.438723730116699 0.438828437652594 0 0 hPsi_site_16077 iPseU_CNN:0;iRNA_PseU:0 16078 chr2 28352189 28352189 1 + G A CESC 28352188 + 28352168 28352208 41 GCCCTCCTCTCTGTTAGTTTTGAGGACACTGAAGCCACCCA GCCCTCCTCTCTGTTAGTTTTAAGGACACTGAAGCCACCCA < 41bp 0.468103926715208 0.847936221161449 0.28341746 0.3936176 prediction 0.695872442322897 Functional Gain - BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28352188 chr2:28352189 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22354 0 0 1 0 2 Nucleus 0.438723217989375 0.438718592994843 0 0 hPsi_site_16078 iPseU_CNN:0;iRNA_PseU:0 16079 chr9 80919698 80919698 1 + G A LUSC 80919697 + 80919677 80919717 41 TTTTTCTGCAAGGAGGTGGGTGCGGCCAGTTCAGTGCTGTC TTTTTCTGCAAGGAGGTGGGTACGGCCAGTTCAGTGCTGTC < 41bp 0.446292311033693 0.84792771513035 0.2726285 0.74804294 prediction 0.695855430260701 Functional Gain - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80919697 chr9:80919698 nonsynonymous SNV 0.909 1 22 hPsi_associated_SNPs_22355 0 0 1 0 1 Ribosome 0.438715284305089 0.438716009953086 0.49608588 0 hPsi_site_16079 iPseU_CNN:0.49608588;iRNA_PseU:0 16080 chr22 21363503 21363503 1 + G A COAD 21363502 + 21363482 21363522 41 CATGTCATAGGTGGCTTTGCTGTCGACTATGAAGGCACAGT CATGTCATAGGTGGCTTTGCTATCGACTATGAAGGCACAGT < 41bp 0.477824397278334 0.847924210377117 0.39118809 0.7653475 prediction 0.695848420754234 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363502 chr22:21363503 . . 0 22 hPsi_associated_SNPs_22356 0 0 0 3 0 unknown 0.438785950599735 0.43876669068942 0.530695 0 hPsi_site_16080 iPseU_CNN:0.530695;iRNA_PseU:0 16081 chr3 13543419 13543419 1 + C A UCEC 13543418 + 13543398 13543438 41 TCCAGGGCTACCATCATTGATCTTGATGCCCATCAGGTGAG TCCAGGGCTACCATCATTGATATTGATGCCCATCAGGTGAG < 41bp 0.493717557860794 0.847924137259471 0.47318378 0.7176138 prediction 0.695848274518942 Functional Gain - HDAC11 ENSG00000163517 CDS Human protein_coding chr3:13543418 chr3:13543419 nonsynonymous SNV 0.924 3 22 hPsi_associated_SNPs_22357 0 0 1 0 2 Cytosol 0.438718769834976 0.437462912512999 0.4352276 0 hPsi_site_16081 iPseU_CNN:0.4352276;iRNA_PseU:0 16082 chr17 8219105 8219105 1 + C A HNSC 8219104 + 8219084 8219124 41 CGCTCCTGTCCCGTGTGCGCTCTTCCCCCCACATCAGCGAC CGCTCCTGTCCCGTGTGCGCTATTCCCCCCACATCAGCGAC < 41bp 0.51337491083979 0.861294543793607 0.74547505 0.8565315 prediction 0.695839265907634 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8219104 chr17:8219105 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_22358 0 0 0 0 1 exosome 0.438944006468755 0.438717515191233 0.2221129 0 hPsi_site_16082 iPseU_CNN:0.2221129;iRNA_PseU:0 16083 chr6 144508076 144508076 1 + G A PRAD 144508075 + 144508055 144508095 41 CGAGGTCATCCACTGCAAGCTGCGCGCCATGAAGGAGCTGA CGAGGTCATCCACTGCAAGCTACGCGCCATGAAGGAGCTGA < 41bp 0.471092904141864 0.847916835806138 0.26164925 0.8073242 prediction 0.695833671612276 Functional Gain - STX11 ENSG00000135604 CDS Human protein_coding chr6:144508075 chr6:144508076 synonymous SNV . 0 22 hPsi_associated_SNPs_22359 0 0 0 0 0 Nucleus 0.438526221224715 0.438261992171613 0.6146484 0 hPsi_site_16083 iPseU_CNN:0.6146484;iRNA_PseU:0 16084 chr10 116734989 116734989 1 + G A UCEC 116734988 + 116734968 116735008 41 AAATGGACAATTGATGACATTGCACAGTCTCTTGAGCATTG AAATGGACAATTGATGACATTACACAGTCTCTTGAGCATTG < 41bp 0.497928500937553 0.847911369793727 0.23865172 0.3138548 prediction 0.695822739587454 Functional Gain - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116734988 chr10:116734989 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_22360 0 0 1 0 0 Ribosome 0.438695881517909 0.438752983394236 0 0 hPsi_site_16084 iPseU_CNN:0;iRNA_PseU:0 16085 chr12 112457617 112457617 1 + G A BLCA 112457616 + 112457596 112457636 41 GACACCCAGTACCCCTACGGTGAGAAGCAGGATGAGTTCAA GACACCCAGTACCCCTACGGTAAGAAGCAGGATGAGTTCAA < 41bp 0.541693159343357 0.889592436417878 0.28591937 0.4765964 prediction 0.695798554149041 Functional Gain - ERP29 ENSG00000089248 CDS Human protein_coding chr12:112457616 chr12:112457617 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22361 0 0 1 0 2 Ribosome 0.438752733137959 0.438718556556692 0 0 hPsi_site_16085 iPseU_CNN:0;iRNA_PseU:0 16086 chr9 116132275 116132275 1 + G A rs3750529 116132274 + 116132254 116132294 41 GCTGCGGGGCCCAGCCCAGCTGGGTGTAGTGCTGGACTTGC GCTGCGGGGCCCAGCCCAGCTAGGTGTAGTGCTGGACTTGC < 41bp 0.447175090529788 0.847883815233178 0.1321935 0.23702982 prediction 0.695767630466356 Functional Gain - BSPRY ENSG00000119411 CDS Human protein_coding chr9:116132274 chr9:116132275 synonymous SNV . 0 22 hPsi_associated_SNPs_22362 0 0 0 0 0 Ribosome 0.43950400413671 0.438718479678006 0 0 hPsi_site_16086 iPseU_CNN:0;iRNA_PseU:0 16087 chr14 63747808 63747808 1 + C A LUAD 63747807 + 63747787 63747827 41 GGAGGAATGGGTCCCCGAGCTCAAGGACTGCATGCCTCACG GGAGGAATGGGTCCCCGAGCTAAAGGACTGCATGCCTCACG < 41bp 0.498451293024266 0.847883134067197 0.36181676 0.35182878 prediction 0.695766268134394 Functional Gain - RHOJ ENSG00000126785 CDS Human protein_coding chr14:63747807 chr14:63747808 synonymous SNV . 0 22 hPsi_associated_SNPs_22363 0 0 0 0 1 Cytosol 0.438718420931798 0.438718622633628 0 0 hPsi_site_16087 iPseU_CNN:0;iRNA_PseU:0 16088 chr3 125639709 125639709 1 + C A rs112541516 125639708 + 125639688 125639728 41 TGTGACGCACCCGCCGTCAGTCAAGTATGCCCGGTGCTTTC TGTGACGCACCCGCCGTCAGTAAAGTATGCCCGGTGCTTTC < 41bp 0.497645898024949 0.847879710427491 0.3840273 0.40703976 prediction 0.695759420854983 Functional Gain - FAM86JP ENSG00000171084 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:125639708 chr3:125639709 . . 0 22 hPsi_associated_SNPs_22364 0 0 0 0 2 unknown 0.438722542785835 0.438713725618577 0 0 hPsi_site_16088 iPseU_CNN:0;iRNA_PseU:0 16089 chr1 150936868 150936868 1 + G A LUSC 150936867 + 150936847 150936887 41 GCCTTCTTCCCAACCCTTCTTGAACTGTCGTTTCCTCAGGA GCCTTCTTCCCAACCCTTCTTAAACTGTCGTTTCCTCAGGA < 41bp 0.526649515704073 0.874528511111658 0.27264214 0.3902428 prediction 0.69575799081517 Functional Gain - SETDB1 ENSG00000143418 CDS Human protein_coding chr1:150936867 chr1:150936868 synonymous SNV . 0 22 hPsi_associated_SNPs_22365 0 0 1 0 0 Nucleus 0.438718775135711 0.438706463642424 0 0 hPsi_site_16089 iPseU_CNN:0;iRNA_PseU:0 16090 chr12 49725417 49725417 1 + G A rs186093263 49725416 + 49725396 49725436 41 CATGATGAGACAACCACTCCTGCCCTGCCGTACTTCTTCCT CATGATGAGACAACCACTCCTACCCTGCCGTACTTCTTCCT < 41bp 0.534443603202729 0.882319051716052 0.27863395 0.3970515 prediction 0.695750897026645 Functional Gain - TROAP ENSG00000135451 UTR3 Human protein_coding chr12:49725416 chr12:49725417 . . 0 22 hPsi_associated_SNPs_22366 0 0 1 1 0 Ribosome 0.438723625868866 0.438691064034346 0 0 hPsi_site_16090 iPseU_CNN:0;iRNA_PseU:0 16091 chr2 74717523 74717523 1 + G A rs2276691 74717522 + 74717502 74717542 41 CCCTGCCCTCAAAGCCCCTCTGCCTCTGCCACCTTCCCCAG CCCTGCCCTCAAAGCCCCTCTACCTCTGCCACCTTCCCCAG < 41bp 0.437519816137514 0.847872803553798 0.20789433 0.44646135 prediction 0.695745607107597 Functional Gain - TTC31 ENSG00000115282 CDS Human protein_coding chr2:74717522 chr2:74717523 nonsynonymous SNV 0.578 1 22 hPsi_associated_SNPs_22367 0 0 1 0 1 Cytosol 0.43871858676264 0.438718592971797 0 0 hPsi_site_16091 iPseU_CNN:0;iRNA_PseU:0 16092 chr12 69135685 69135685 1 + G A UCEC 69135684 + 69135664 69135704 41 TTTTCTGCTTCATACGATATTGCACAGTACTGGTCAGTATC TTTTCTGCTTCATACGATATTACACAGTACTGGTCAGTATC < 41bp 0.529324115722746 0.877193623463248 0.15281653 0.19040236 prediction 0.695739015481005 Functional Gain - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69135684 chr12:69135685 synonymous SNV . 0 22 hPsi_associated_SNPs_22368 0 0 1 0 2 chromatin 0.438718593144262 0.438718601086536 0 0 hPsi_site_16092 iPseU_CNN:0;iRNA_PseU:0 16093 chr17 39261729 39261729 1 + G A LUAD 39261728 + 39261708 39261748 41 CCTGCTGCCGCCCCAGCTGCTGTGAGACCACCTGCTGCAGG CCTGCTGCCGCCCCAGCTGCTATGAGACCACCTGCTGCAGG < 41bp 0.474066737220571 0.847862380468699 0.29005706 0.5991642 prediction 0.695724760937397 Functional Gain - KRTAP4-9 ENSG00000212722 CDS Human protein_coding chr17:39261728 chr17:39261729 nonsynonymous SNV 0.673 1 22 hPsi_associated_SNPs_22369 0 0 0 0 0 unknown 0.438718600318863 0.438718599872513 0.1983284 0 hPsi_site_16093 iPseU_CNN:0.1983284;iRNA_PseU:0 16094 chrX 153667426 153667426 1 + G A LUSC 153667425 + 153667405 153667445 41 AAGGTGGTGGAGGGCAGCTTTGTCTACAAGGGGGGCAAGAT AAGGTGGTGGAGGGCAGCTTTATCTACAAGGGGGGCAAGAT < 41bp 0.550006446291835 0.89786799959643 0.29927236 0.44217384 prediction 0.69572310660919 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153667425 chrX:153667426 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22370 0 0 1 0 2 Cytosol 0.438718585068315 0.438718357444489 0 0 hPsi_site_16094 iPseU_CNN:0;iRNA_PseU:0 16095 chr20 42695416 42695416 1 + C A LUAD 42695415 + 42695395 42695435 41 CCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAACCCC CCAGCAGCTCGGGATCCTGCTAACCTGGCCCATCCAACCCC < 41bp 0.488503134174497 0.847850946160591 0.24397391 0.5515942 prediction 0.695701892321182 Functional Gain - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695415 chr20:42695416 stopgain 0.911 0 22 hPsi_associated_SNPs_22371 0 0 1 0 2 exosome 0.43871865836508 0.43871857734829 0.1031884 0 hPsi_site_16095 iPseU_CNN:0.1031884;iRNA_PseU:0 16096 chr20 36031234 36031234 1 + C A HNSC 36031233 + 36031213 36031253 41 CAAGTCGGACGTGTGGTCCTTCGGGATCCTGCTGACTGAGC CAAGTCGGACGTGTGGTCCTTAGGGATCCTGCTGACTGAGC < 41bp 0.505958512525511 0.853807314798902 0.32534444 0.4112727 prediction 0.695697604546782 Functional Gain - SRC ENSG00000197122 CDS Human protein_coding chr20:36031233 chr20:36031234 nonsynonymous SNV 0.988 5 22 hPsi_associated_SNPs_22372 0 0 1 0 2 Ribosome 0.438446464955376 0.438719283676571 0 0 hPsi_site_16096 iPseU_CNN:0;iRNA_PseU:0 16097 chr16 30768869 30768869 1 + G A CESC 30768868 + 30768848 30768888 41 TAGTGCAGTCAACTTGCTGCTGAGCCTTTCCTCGCTGGCCT TAGTGCAGTCAACTTGCTGCTAAGCCTTTCCTCGCTGGCCT < 41bp 0.533928686463745 0.881776828816485 0.22868142 0.27956492 prediction 0.69569628470548 Functional Gain - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30768868 chr16:30768869 synonymous SNV . 0 22 hPsi_associated_SNPs_22373 0 0 1 0 0 chromatin 0.438109397991373 0.438725293553921 0 0 hPsi_site_16097 iPseU_CNN:0;iRNA_PseU:0 16098 chr10 85956359 85956359 1 + G A KIRP 85956358 + 85956338 85956378 41 ACTAGAAGCGTCTTTTCTGTTGACCCCACTTTTGGAAACAT ACTAGAAGCGTCTTTTCTGTTAACCCCACTTTTGGAAACAT < 41bp 0.470627586864134 0.847835155375247 0.38252658 0.8644688 prediction 0.695670310750494 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85956358 chr10:85956359 nonsynonymous SNV 0.934 2 22 hPsi_associated_SNPs_22374 0 0 0 0 2 cytosol 0.438718528542307 0.438718592953502 0.7289376 0 hPsi_site_16098 iPseU_CNN:0.7289376;iRNA_PseU:0 16099 chr1 55474305 55474305 1 + G A rs570334765 55474304 + 55474284 55474324 41 CCTGACACCCAAGGCTGAGATGTTTGTGCTCCGTAGCTTCT CCTGACACCCAAGGCTGAGATATTTGTGCTCCGTAGCTTCT < 41bp 0.510275821728824 0.858102273188701 0.3194804 0.3757534 prediction 0.695652902919755 Functional Gain - BSND ENSG00000162399 UTR3 Human protein_coding chr1:55474304 chr1:55474305 . . 0 22 hPsi_associated_SNPs_22375 0 0 0 0 0 unknown 0.438718585438958 0.438718672377037 0 0 hPsi_site_16099 iPseU_CNN:0;iRNA_PseU:0 16100 chr1 159169584 159169584 1 + C T SKCM 159169585 - 159169565 159169605 41 GAAAGCCACGATCCCACCGATGATGGCGTGGTAGGTGCTGG GAAAGCCACGATCCCACCGATAATGGCGTGGTAGGTGCTGG < 41bp 0.534665366875414 0.882490226095298 0.17344773 0.184001 prediction 0.695649718439769 Functional Gain - CADM3 ENSG00000162706 CDS Human protein_coding chr1:159169585 chr1:159169584 synonymous SNV . 0 22 hPsi_associated_SNPs_22376 0 0 0 0 2 exosome 0.438718599732667 0.438718525507725 0 0 hPsi_site_16100 iPseU_CNN:0;iRNA_PseU:0 16101 chr11 67815412 67815412 1 + G A SKCM 67815411 + 67815391 67815431 41 CAACGTCACCGGTGTCTTCCTGGGACCCTACCCCTTTGGCA CAACGTCACCGGTGTCTTCCTAGGACCCTACCCCTTTGGCA < 41bp 0.445199863522761 0.847818207161641 0.13455576 0.2612552 prediction 0.695636414323281 Functional Gain - TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67815411 chr11:67815412 synonymous SNV . 0 22 hPsi_associated_SNPs_22377 0 0 1 0 2 Nucleus 0.438735177780855 0.438718708913374 0 0 hPsi_site_16101 iPseU_CNN:0;iRNA_PseU:0 16102 chr17 73106677 73106677 1 + G A BLCA 73106676 + 73106656 73106696 41 GATTCGCTGTCGGAGGAGAATGAGACCCTGGTGGAGTTTGC GATTCGCTGTCGGAGGAGAATAAGACCCTGGTGGAGTTTGC < 41bp 0.535848174908765 0.883665619580325 0.29216513 0.70125043 prediction 0.69563488934312 Functional Gain - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73106676 chr17:73106677 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_22378 0 0 1 0 1 Cytosol 0.438721644524688 0.438718593223259 0.40250086 0 hPsi_site_16102 iPseU_CNN:0.40250086;iRNA_PseU:0 16103 chr1 28293177 28293177 1 + G A LUSC 28293176 + 28293156 28293196 41 GTGGCCCCGAGTCCTGGCTGTGGCCCTGTTCTCAGCCCTCT GTGGCCCCGAGTCCTGGCTGTAGCCCTGTTCTCAGCCCTCT < 41bp 0.542950985099775 0.890765429384971 0.22808519 0.7446457 prediction 0.695628888570393 Functional Gain - XKR8 ENSG00000158156 CDS Human protein_coding chr1:28293176 chr1:28293177 synonymous SNV . 0 22 hPsi_associated_SNPs_22379 0 0 0 0 0 Endoplasmic reticulum 0.438561304594257 0.438656471342274 0.4892914 0 hPsi_site_16103 iPseU_CNN:0.4892914;iRNA_PseU:0 16104 chr1 33945198 33945198 1 + G A LUSC 33945197 + 33945177 33945217 41 GGAGCAGTTCCTGACTATCTTGCCTAGGGAGGTCCAGACCT GGAGCAGTTCCTGACTATCTTACCTAGGGAGGTCCAGACCT < 41bp 0.540181102465499 0.887990157736604 0.28709748 0.35407615 prediction 0.695618110542209 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33945197 chr1:33945198 synonymous SNV . 0 22 hPsi_associated_SNPs_22380 0 0 0 0 0 exosome 0.438718255875345 0.43871915872142 0 0 hPsi_site_16104 iPseU_CNN:0;iRNA_PseU:0 16105 chr17 7214697 7214697 1 + C A BLCA 7214696 + 7214676 7214716 41 GCATCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGG GCATCCAGGATGGGTACCTATAACTGCTCCAGGACAGCGGG < 41bp 0.509741544871626 0.857545909628224 0.17748722 0.6310931 prediction 0.695608729513195 Functional Gain - EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214696 chr17:7214697 stopgain 1.000 1 22 hPsi_associated_SNPs_22381 0 0 1 0 1 Ribosome 0.438718729797751 0.438718592999831 0.2621862 0 hPsi_site_16105 iPseU_CNN:0.2621862;iRNA_PseU:0 16106 chr11 61508004 61508004 1 + C A UCEC 61508003 + 61507983 61508023 41 CAAGGCCTTCAATGAGGTGATCATCTCGCCAGCCATGCTGC CAAGGCCTTCAATGAGGTGATAATCTCGCCAGCCATGCTGC < 41bp 0.499842728729703 0.847802637305963 0.23302045 0.30414975 prediction 0.695605274611926 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61508003 chr11:61508004 synonymous SNV . 0 22 hPsi_associated_SNPs_22382 0 0 1 0 2 Endoplasmic reticulum 0.414016986074895 0.403261195855298 0 0 hPsi_site_16106 iPseU_CNN:0;iRNA_PseU:0 16107 chr10 102738749 102738749 1 + G A SARC 102738748 + 102738728 102738768 41 CAGAGCCGCAGCAGTCACCGTGTGGCCCGTGTGGCTCGTGT CAGAGCCGCAGCAGTCACCGTATGGCCCGTGTGGCTCGTGT < 41bp 0.542429007953231 0.890230917527353 0.26544398 0.569452 prediction 0.695603819148245 Functional Gain - SEMA4G ENSG00000055950;ENSG00000095539 CDS Human other chr10:102738748 chr10:102738749 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_22383 0 0 1 0 1 nucleoplasm 0.438722604798159 0.438805457548411 0.138904 0 hPsi_site_16107 iPseU_CNN:0.138904;iRNA_PseU:0 16108 chr11 71944132 71944132 1 + C A UCEC 71944131 + 71944111 71944151 41 TTCCTTAGGTGAGGAGGAGATCTCCTTCCCACCCACCTACC TTCCTTAGGTGAGGAGGAGATATCCTTCCCACCCACCTACC < 41bp 0.505741443309143 0.853528401734712 0.531307 0.7696185 prediction 0.695573916851138 Functional Gain - INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71944131 chr11:71944132 synonymous SNV . 0 22 hPsi_associated_SNPs_22384 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0.476623 0 hPsi_site_16108 iPseU_CNN:0.476623;iRNA_PseU:0 16109 chr11 126176557 126176557 1 + G A BLCA 126176556 + 126176536 126176576 41 GGAACAGGTGGCTCAGCTCCTGACGGGCAGCCCTGAGCTCC GGAACAGGTGGCTCAGCTCCTAACGGGCAGCCCTGAGCTCC < 41bp 0.439637730911232 0.847780699922069 0.23692465 0.72407395 prediction 0.695561399844138 Functional Gain - DCPS ENSG00000110063 CDS Human protein_coding chr11:126176556 chr11:126176557 synonymous SNV . 0 22 hPsi_associated_SNPs_22385 0 0 1 0 2 Ribosome 0.438718593845388 0.438718592995102 0.4481479 0 hPsi_site_16109 iPseU_CNN:0.4481479;iRNA_PseU:0 16110 chr7 44737062 44737062 1 + G A rs144282315 44737061 + 44737041 44737081 41 CAATCAGGCCCCCTATACTGTGTGCAACAGCTCACTGTCTG CAATCAGGCCCCCTATACTGTATGCAACAGCTCACTGTCTG < 41bp 0.431866204722445 0.84777062889523 0.42163065 0.69734615 prediction 0.695541257790459 Functional Gain - OGDH ENSG00000105953 CDS Human protein_coding chr7:44737061 chr7:44737062 synonymous SNV . 0 22 hPsi_associated_SNPs_22386 0 0 1 0 1 Nucleus 0.439804243983587 0.439105866995222 0.3946923 0 hPsi_site_16110 iPseU_CNN:0.3946923;iRNA_PseU:0 16111 chr12 6935381 6935381 1 + G A UCEC 6935380 + 6935360 6935400 41 GATGGGGGCTGTGACGACTATGCAGAGGGCCGAGTTTGCAA GATGGGGGCTGTGACGACTATACAGAGGGCCGAGTTTGCAA < 41bp 0.545732817525779 0.893500826170782 0.33300447 0.58283305 prediction 0.695536017290007 Functional Gain - GPR162 ENSG00000250510 CDS Human protein_coding chr12:6935380 chr12:6935381 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_22387 0 0 0 0 1 Endoplasmic reticulum 0.438718593036744 0.438718592995311 0.1656661 0 hPsi_site_16111 iPseU_CNN:0.1656661;iRNA_PseU:0 16112 chr7 142997043 142997043 1 + G A UCEC 142997042 + 142997022 142997062 41 CAAGAGAAACTGCAGAATTTTGCACAGTTACCTGCACACCG CAAGAGAAACTGCAGAATTTTACACAGTTACCTGCACACCG < 41bp 0.443611384395678 0.847752352893612 0.23364565 0.41338152 prediction 0.695504705787225 Functional Gain - CASP2 ENSG00000106144 CDS Human protein_coding chr7:142997042 chr7:142997043 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_22388 0 0 1 2 1 Nucleus 0.438713084368778 0.438287668779719 0 0 hPsi_site_16112 iPseU_CNN:0;iRNA_PseU:0 16113 chr19 54445546 54445546 1 + G A HNSC 54445545 + 54445525 54445565 41 ACATCTCCACCTCGCCCTGCTGAGGCCCGCCCCTCGGAGCT ACATCTCCACCTCGCCCTGCTAAGGCCCGCCCCTCGGAGCT < 41bp 0.53309696757843 0.880843154369696 0.262768 0.34129936 prediction 0.695492373582531 Functional Gain - CACNG7 ENSG00000105605 CDS Human protein_coding chr19:54445545 chr19:54445546 synonymous SNV . 0 22 hPsi_associated_SNPs_22389 0 0 0 0 0 unknown 0.438743736272972 0.438718576321113 0 0 hPsi_site_16113 iPseU_CNN:0;iRNA_PseU:0 16114 chr14 50360571 50360571 1 + G A BLCA 50360570 + 50360550 50360590 41 GTTGAAGCTGGGCCAGTCGGTGACCACCATTCCCACTGTGG GTTGAAGCTGGGCCAGTCGGTAACCACCATTCCCACTGTGG < 41bp 0.537509972766521 0.885255521648892 0.21195847 0.7101293 prediction 0.695491097764741 Functional Gain - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360570 chr14:50360571 synonymous SNV . 0 22 hPsi_associated_SNPs_22390 0 0 1 0 0 Cytosol 0.438718592996904 0.438718591550159 0.4202586 0 hPsi_site_16114 iPseU_CNN:0.4202586;iRNA_PseU:0 16115 chr11 561798 561798 1 + G A rs143459467 561797 + 561777 561817 41 GGGACTGGCGGCCATGGAGCTGAAGGTGTGGGTGGATGGCA GGGACTGGCGGCCATGGAGCTAAAGGTGTGGGTGGATGGCA < 41bp 0.539462995187576 0.887206651511365 0.22042248 0.35913044 prediction 0.695487312647577 Functional Gain - RASSF7 ENSG00000099849 CDS Human protein_coding chr11:561797 chr11:561798 synonymous SNV . 0 22 hPsi_associated_SNPs_22391 0 0 1 0 2 exosome 0.438586756532551 0.438494619982419 0 0 hPsi_site_16115 iPseU_CNN:0;iRNA_PseU:0 16116 chr15 91453424 91453424 1 + C A CESC 91453423 + 91453403 91453443 41 TCCTGTGCTGAGCGGGGATTTCTTCTCCTATGCGGACCGGG TCCTGTGCTGAGCGGGGATTTATTCTCCTATGCGGACCGGG < 41bp 0.508753320490452 0.856488136607969 0.35688388 0.62741524 prediction 0.695469632235034 Functional Gain - MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91453423 chr15:91453424 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22392 0 0 1 0 1 Endoplasmic reticulum 0.438323655831093 0.438724255758862 0.25483048 0 hPsi_site_16116 iPseU_CNN:0.25483048;iRNA_PseU:0 16117 chr2 218954067 218954067 1 + C A UCEC 218954066 + 218954046 218954086 41 GCAAGATCTTTGGCCGATTTTCTCGGCGGTATCCATGCAGG GCAAGATCTTTGGCCGATTTTATCGGCGGTATCCATGCAGG < 41bp 0.500601950981308 0.848335250342403 0.40314806 0.42457062 prediction 0.695466598722189 Functional Gain - RUFY4 ENSG00000188282 CDS Human protein_coding chr2:218954066 chr2:218954067 nonsynonymous SNV 0.984 3 22 hPsi_associated_SNPs_22393 0 0 0 0 2 exosome 0.438721594078871 0.438973784327016 0 0 hPsi_site_16117 iPseU_CNN:0;iRNA_PseU:0 16118 chr2 27596805 27596805 1 + G A rs201545588 27596804 + 27596784 27596824 41 GCAGAAAGTTCTGGTCAACGTGCTAACTTCAGATCAGACTG GCAGAAAGTTCTGGTCAACGTACTAACTTCAGATCAGACTG < 41bp 0.462355664818543 0.847729647070407 0.11977005 0.31209105 prediction 0.695459294140814 Functional Gain - SNX17 ENSG00000115234 CDS Human protein_coding chr2:27596804 chr2:27596805 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22394 0 0 1 0 2 Ribosome 0.438718585685521 0.438718599829133 0 0 hPsi_site_16118 iPseU_CNN:0;iRNA_PseU:0 16119 chr7 143657649 143657649 1 + G A GBM 143657648 + 143657628 143657668 41 TGTGTGGACACCTCCTCCAATGAGGTCACCATCATGGTGTC TGTGTGGACACCTCCTCCAATAAGGTCACCATCATGGTGTC < 41bp 0.465906196201049 0.847728032725721 0.21067029 0.2795043 prediction 0.695456065451441 Functional Gain - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657648 chr7:143657649 nonsynonymous SNV 0.517 0 22 hPsi_associated_SNPs_22395 0 0 0 0 0 unknown 0.439080239248466 0.438676941039095 0 0 hPsi_site_16119 iPseU_CNN:0;iRNA_PseU:0 16120 chr20 56993284 56993284 1 + G A PRAD 56993283 + 56993263 56993303 41 ACAGGTCCCTTCACCGATGTTGTCACCACCAACCTAAAGCT ACAGGTCCCTTCACCGATGTTATCACCACCAACCTAAAGCT < 41bp 0.537347653658989 0.885069553015363 0.31636313 0.6104764 prediction 0.695443798712749 Functional Gain - VAPB ENSG00000124164 CDS Human protein_coding chr20:56993283 chr20:56993284 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22396 0 0 1 0 1 Ribosome 0.438916091868756 0.438765919551737 0.2209528 0 hPsi_site_16120 iPseU_CNN:0.2209528;iRNA_PseU:0 16121 chr2 172844210 172844210 1 + G A CESC 172844209 + 172844189 172844229 41 TCGACTACTGGTAACTGACATGAGTGATGCCGAACAATACA TCGACTACTGGTAACTGACATAAGTGATGCCGAACAATACA < 41bp 0.481957484311208 0.847720304752434 0.23786896 0.39873406 prediction 0.695440609504868 Functional Gain - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172844209 chr2:172844210 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22397 0 0 1 0 2 Ribosome 0.44134148833252 0.438729750397924 0 0 hPsi_site_16121 iPseU_CNN:0;iRNA_PseU:0 16122 chr17 29325705 29325705 1 + G A LUSC 29325704 + 29325684 29325724 41 CATCCATCCAACCTTTAACTTGAAGAGCCTTTCCTGCAGCC CATCCATCCAACCTTTAACTTAAAGAGCCTTTCCTGCAGCC < 41bp 0.472127991106057 0.847719097191851 0.33697313 0.45995736 prediction 0.695438194383703 Functional Gain - RNF135 ENSG00000181481 CDS Human protein_coding chr17:29325704 chr17:29325705 synonymous SNV . 0 22 hPsi_associated_SNPs_22398 0 0 0 0 1 Ribosome 0.438718552533951 0.438718558733753 0 0 hPsi_site_16122 iPseU_CNN:0;iRNA_PseU:0 16123 chr15 89169954 89169954 1 + G A rs61752779 89169953 + 89169933 89169973 41 CGGCAGCACATGCGCAAGGCTGTCCCCTTCCAGGTGGCCCA CGGCAGCACATGCGCAAGGCTATCCCCTTCCAGGTGGCCCA < 41bp 0.446131444685554 0.847717726401379 0.22079057 0.29746747 prediction 0.695435452802758 Functional Gain - AEN ENSG00000181026 CDS Human protein_coding chr15:89169953 chr15:89169954 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_22399 0 0 1 0 1 Ribosome 0.438718541099466 0.438718851018132 0 0 hPsi_site_16123 iPseU_CNN:0;iRNA_PseU:0 16124 chr4 38910248 38910248 1 + G A BLCA 38910247 + 38910227 38910267 41 AACTGGAGGCCTTGATGCGTTGGAATTCATCGGCAAGAAAA AACTGGAGGCCTTGATGCGTTAGAATTCATCGGCAAGAAAA < 41bp 0.529234827079818 0.876936168304217 0.30000326 0.65892315 prediction 0.695402682448799 Functional Gain - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38910247 chr4:38910248 synonymous SNV . 0 22 hPsi_associated_SNPs_22400 0 0 1 0 1 Cytosol 0.438718592995159 0.438719730007975 0.3178463 0 hPsi_site_16124 iPseU_CNN:0.3178463;iRNA_PseU:0 16125 chr19 41224091 41224091 1 + G A BLCA 41224090 + 41224070 41224110 41 GTGGGACCCCCCTCCCGGGTTGAGGGGGGCAGCGGCGGCTT GTGGGACCCCCCTCCCGGGTTAAGGGGGGCAGCGGCGGCTT < 41bp 0.467531415057514 0.84770087068972 0.28916913 0.64328647 prediction 0.69540174137944 Functional Gain - ITPKC ENSG00000086544 CDS Human protein_coding chr19:41224090 chr19:41224091 nonsynonymous SNV 0.073 1 22 hPsi_associated_SNPs_22401 0 0 1 0 0 Cytosol 0.438715458061838 0.438718588161899 0.28657294 0 hPsi_site_16125 iPseU_CNN:0.28657294;iRNA_PseU:0 16126 chr11 5020893 5020893 1 + G A UCEC 5020892 + 5020872 5020912 41 TGTTCTGATTCTTAATACTGTGCTGGATATTGCATCTCGTG TGTTCTGATTCTTAATACTGTACTGGATATTGCATCTCGTG < 41bp 0.490899692238923 0.847694936574432 0.2579834 0.74305224 prediction 0.695389873148863 Functional Gain - OR51L1 ENSG00000176798 CDS Human protein_coding chr11:5020892 chr11:5020893 synonymous SNV . 0 22 hPsi_associated_SNPs_22402 0 0 0 0 0 unknown 0.438730111942434 0.438570193197901 0.48610448 0 hPsi_site_16126 iPseU_CNN:0.48610448;iRNA_PseU:0 16127 chr1 36354062 36354062 1 + G A KIRP 36354061 + 36354041 36354081 41 CCTGCCCCCCCTGCAGCAGGTGTTCCAGGCACCTCGCCGGC CCTGCCCCCCCTGCAGCAGGTATTCCAGGCACCTCGCCGGC < 41bp 0.438205211125223 0.847684149518022 0.30040717 0.92778325 prediction 0.695368299036044 Functional Gain - AGO1 ENSG00000092847 CDS Human protein_coding chr1:36354061 chr1:36354062 synonymous SNV . 0 22 hPsi_associated_SNPs_22403 0 0 1 0 1 Cytosol 0.438718592975979 0.438718616761286 0.8555665 0 hPsi_site_16127 iPseU_CNN:0.8555665;iRNA_PseU:0 16128 chr15 40866352 40866352 1 + G A READ 40866351 + 40866331 40866371 41 GCTGGTGCGACAGGATCCCTTGCCCCAAGACCTTGTGATGT GCTGGTGCGACAGGATCCCTTACCCCAAGACCTTGTGATGT < 41bp 0.536724195637036 0.884398941771873 0.25336057 0.6355003 prediction 0.695349492269675 Functional Gain - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40866351 chr15:40866352 synonymous SNV . 0 22 hPsi_associated_SNPs_22404 0 0 1 0 0 Cytosol 0.443548798114699 0.440279134405208 0.2710006 0 hPsi_site_16128 iPseU_CNN:0.2710006;iRNA_PseU:0 16129 chr1 154300597 154300597 1 + G A UCEC 154300596 + 154300576 154300616 41 TGCAGGGTCTCCCATGGGATTGCTGGGATCTTGCTGGGTGA TGCAGGGTCTCCCATGGGATTACTGGGATCTTGCTGGGTGA < 41bp 0.451641855416971 0.847674110588396 0.23211312 0.3584817 prediction 0.695348221176793 Functional Gain - ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154300596 chr1:154300597 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22405 0 0 1 0 1 chromatin 0.438728266654959 0.438715424352547 0 0 hPsi_site_16129 iPseU_CNN:0;iRNA_PseU:0 16130 chr3 16268951 16268951 1 + G A SKCM 16268950 + 16268930 16268970 41 TTGTACCTGCGTCCGTGTGATGGAAAAGCCCGCCAGCAGTG TTGTACCTGCGTCCGTGTGATAGAAAAGCCCGCCAGCAGTG < 41bp 0.468565428976812 0.847661582698439 0.22037566 0.31534016 prediction 0.695323165396878 Functional Gain - GALNT15 ENSG00000131386 CDS Human protein_coding chr3:16268950 chr3:16268951 nonsynonymous SNV 0.628 1 22 hPsi_associated_SNPs_22406 0 0 0 0 1 exosome 0.438885555333118 0.438584387903808 0 0 hPsi_site_16130 iPseU_CNN:0;iRNA_PseU:0 16131 chr2 219605270 219605270 1 + G A UCEC 219605269 + 219605249 219605289 41 TCAGAGTGCTCCTCATTAAGTGCTGTCTCCCCCAGCGAATC TCAGAGTGCTCCTCATTAAGTACTGTCTCCCCCAGCGAATC < 41bp 0.441549081415319 0.847657479689482 0.23118994 0.48833507 prediction 0.695314959378964 Functional Gain - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219605269 chr2:219605270 nonsynonymous SNV 0.355 0 22 hPsi_associated_SNPs_22407 0 0 1 0 2 Cytosol 0.438678877682386 0.438718546420096 0 0 hPsi_site_16131 iPseU_CNN:0;iRNA_PseU:0 16132 chr9 140111582 140111582 1 + G A rs572363681 140111581 + 140111561 140111601 41 GGTGCTGGGTGCTGGATGGGTGGGCGTCCTCTAGCTCCTCC GGTGCTGGGTGCTGGATGGGTAGGCGTCCTCTAGCTCCTCC < 41bp 0.508407413004757 0.85603416352184 0.488398 0.9187964 prediction 0.695253501034167 Functional Gain - NDOR1 ENSG00000188566 downstream Human protein_coding chr9:140111581 chr9:140111582 . . 0 22 hPsi_associated_SNPs_22408 0 0 1 0 0 chromatin 0.438718592995102 0.438718592161918 0.8375928 0 hPsi_site_16132 iPseU_CNN:0.8375928;iRNA_PseU:0 16133 chr14 104471693 104471693 1 + C A SKCM 104471692 + 104471672 104471712 41 CTCTGCTGGCCACTGCCCTTTCCCCGCCTGGTCTGAGTGAC CTCTGCTGGCCACTGCCCTTTACCCGCCTGGTCTGAGTGAC < 41bp 0.48726473289629 0.84762001331769 0.19048822 0.3987387 prediction 0.69524002663538 Functional Gain - TDRD9 ENSG00000156414 CDS Human protein_coding chr14:104471692 chr14:104471693 nonsynonymous SNV 0.493 4 22 hPsi_associated_SNPs_22409 0 0 0 0 1 nucleus 0.43871859884427 0.43871623533349 0 0 hPsi_site_16133 iPseU_CNN:0;iRNA_PseU:0 16134 chr22 43525278 43525278 1 + G A rs62640385 43525277 + 43525257 43525297 41 GCTGGCGCTGCTGCTGCCGCTGCTCAGCGGGGGCCTGCACC GCTGGCGCTGCTGCTGCCGCTACTCAGCGGGGGCCTGCACC < 41bp 0.470854498977265 0.847612025838326 0.280252 0.5036314 prediction 0.695224051676651 Functional Gain - BIK ENSG00000100290 CDS Human protein_coding chr22:43525277 chr22:43525278 synonymous SNV . 0 22 hPsi_associated_SNPs_22410 0 0 0 0 1 Ribosome 0.438718690054523 0.438718638381633 0.0072627999999999 0 hPsi_site_16134 iPseU_CNN:0.0072627999999999;iRNA_PseU:0 16135 chr15 31233969 31233969 1 + G A BLCA 31233968 + 31233948 31233988 41 CAGCCAGGAGGGAGAGCTTGTGAAAGGCTGTGATGGAGCCA CAGCCAGGAGGGAGAGCTTGTAAAAGGCTGTGATGGAGCCA < 41bp 0.537844428752108 0.885447057123336 0.30586693 0.39851233 prediction 0.695205256742456 Functional Gain - MTMR10 ENSG00000166912 CDS Human protein_coding chr15:31233968 chr15:31233969 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_22411 0 0 0 0 0 Cytosol 0.438725767941618 0.438713335077637 0 0 hPsi_site_16135 iPseU_CNN:0;iRNA_PseU:0 16136 chr19 19655962 19655962 1 + G A BLCA 19655961 + 19655941 19655981 41 CTCGCCAAGCCCAGGCCAGGTGACCCCGCCGAGGCCAATGG CTCGCCAAGCCCAGGCCAGGTAACCCCGCCGAGGCCAATGG < 41bp 0.457123682603177 0.847601240228605 0.17046785 0.35566396 prediction 0.695202480457211 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19655961 chr19:19655962 nonsynonymous SNV 0.013 0 22 hPsi_associated_SNPs_22412 0 0 0 0 0 exosome 0.438729013619287 0.438718592993966 0 0 hPsi_site_16136 iPseU_CNN:0;iRNA_PseU:0 16137 chr19 36272065 36272065 1 + G A UCEC 36272064 + 36272044 36272084 41 TCTCCCAGTGCCCCAGGTGCTGCGCTGCTGCTCCGAGTTCA TCTCCCAGTGCCCCAGGTGCTACGCTGCTGCTCCGAGTTCA < 41bp 0.449238316013566 0.84759243813671 0.3151272 0.59682 prediction 0.69518487627342 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36272064 chr19:36272065 synonymous SNV . 0 22 hPsi_associated_SNPs_22413 0 0 1 0 2 chromatin 0.438718928045655 0.438718510073312 0.19364 0 hPsi_site_16137 iPseU_CNN:0.19364;iRNA_PseU:0 16138 chr22 32009401 32009401 1 + G A LGG 32009400 + 32009380 32009420 41 GAAAGAAGGCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAG GAAAGAAGGCGCGGCTGCAGTAGGCGCTCCAGGCCTACCAG < 41bp 0.457224820449919 0.847587421783736 0.26019943 0.62042826 prediction 0.695174843567472 Functional Gain - SFI1 ENSG00000198089 CDS Human protein_coding chr22:32009400 chr22:32009401 stopgain 0.000 0 22 hPsi_associated_SNPs_22414 0 0 1 0 1 chromatin 0.438719407050384 0.438720895319102 0.24085652 0 hPsi_site_16138 iPseU_CNN:0.24085652;iRNA_PseU:0 16139 chr19 17873612 17873612 1 + G A CESC 17873611 + 17873591 17873631 41 TGAGGTCCTGTACCACAGCGTGAAGCAGGGGCCCATCTCCA TGAGGTCCTGTACCACAGCGTAAAGCAGGGGCCCATCTCCA < 41bp 0.444599469430029 0.847583370697162 0.2801146 0.66775227 prediction 0.695166741394325 Functional Gain - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17873611 chr19:17873612 synonymous SNV . 0 22 hPsi_associated_SNPs_22415 0 0 1 0 2 Cytosol 0.438719399944835 0.438703761033127 0.33550454 0 hPsi_site_16139 iPseU_CNN:0.33550454;iRNA_PseU:0 16140 chr11 55595126 55595126 1 + G A ACC 55595125 + 55595105 55595145 41 TCAGAAGCTGCGTGTGGAGCTGACCTCTTGCTGCTACTTCT TCAGAAGCTGCGTGTGGAGCTAACCTCTTGCTGCTACTTCT < 41bp 0.471332300894058 0.847581545558354 0.25071308 0.37124765 prediction 0.695163091116709 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595125 chr11:55595126 synonymous SNV . 0 22 hPsi_associated_SNPs_22416 0 0 0 0 0 unknown 0.437520361066661 0.438760690095796 0 0 hPsi_site_16140 iPseU_CNN:0;iRNA_PseU:0 16141 chr1 55161081 55161081 1 + G A rs565616326 55161080 + 55161060 55161100 41 AGTACTCCTGCCAGGAGCTGTGCCGCATCCTCTACCTGCTC AGTACTCCTGCCAGGAGCTGTACCGCATCCTCTACCTGCTC < 41bp 0.456791227119761 0.847575489543108 0.6131611 0.95402026 prediction 0.695150979086215 Functional Gain - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55161080 chr1:55161081 nonsynonymous SNV 0.982 2 22 hPsi_associated_SNPs_22417 0 0 0 0 2 exosome 0.438718597576702 0.438721125122675 0.68171832 0 hPsi_site_16141 iPseU_CNN:0.68171832;iRNA_PseU:0 16142 chr7 150932242 150932242 1 + G A STAD 150932241 + 150932221 150932261 41 CGTGGCTGTGAACCGTACGGTGGCCCATCACTTCCCTCGGT CGTGGCTGTGAACCGTACGGTAGCCCATCACTTCCCTCGGT < 41bp 0.546032355616411 0.893602325758104 0.3693862 0.9236629 prediction 0.695139940283385 Functional Gain - CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150932241 chr7:150932242 synonymous SNV . 0 22 hPsi_associated_SNPs_22418 0 0 1 0 0 Nucleus 0.438722878417723 0.438716096587072 0.8473258 0 hPsi_site_16142 iPseU_CNN:0.8473258;iRNA_PseU:0 16143 chr4 2831797 2831797 1 + G A CESC 2831796 + 2831776 2831816 41 GGCTCCCCGGCCTCCTGCGCTGAAGCTGCCAGTGCCTGAGG GGCTCCCCGGCCTCCTGCGCTAAAGCTGCCAGTGCCTGAGG < 41bp 0.459252109867176 0.847560396901371 0.2352908 0.3351447 prediction 0.695120793802741 Functional Gain - SH3BP2 ENSG00000087266 CDS Human protein_coding chr4:2831796 chr4:2831797 synonymous SNV . 0 22 hPsi_associated_SNPs_22419 0 0 1 0 1 Nucleus 0.438709852691118 0.438718593275557 0 0 hPsi_site_16143 iPseU_CNN:0;iRNA_PseU:0 16144 chr1 160147380 160147380 1 + G A LUSC 160147379 + 160147359 160147399 41 GAGAATGGTTTTAGGCCTGTTGATCTGCTGGGCATCCGCCT GAGAATGGTTTTAGGCCTGTTAATCTGCTGGGCATCCGCCT < 41bp 0.443273408954385 0.847556256583754 0.24275309 0.4526624 prediction 0.695112513167508 Functional Gain - ATP1A4 ENSG00000132681 CDS Human protein_coding chr1:160147379 chr1:160147380 nonsynonymous SNV 0.264 1 22 hPsi_associated_SNPs_22420 0 0 0 0 2 exosome 0.438716435181541 0.438697975150454 0 0 hPsi_site_16144 iPseU_CNN:0;iRNA_PseU:0 16145 chr17 7125568 7125568 1 + G A LUAD 7125567 + 7125547 7125587 41 AGATCCAGCCACAGGAGCCGTGAAGGAGAAGATCACAGCTT AGATCCAGCCACAGGAGCCGTAAAGGAGAAGATCACAGCTT < 41bp 0.438958710482385 0.847556148754932 0.19532436 0.32978022 prediction 0.695112297509863 Functional Gain - ACADVL ENSG00000072778 CDS Human protein_coding chr17:7125567 chr17:7125568 synonymous SNV . 0 22 hPsi_associated_SNPs_22421 0 0 1 2 2 Endoplasmic reticulum 0.438719528154769 0.438982474668313 0 0 hPsi_site_16145 iPseU_CNN:0;iRNA_PseU:0 16146 chr17 41003669 41003669 1 + G A GBM 41003668 + 41003648 41003688 41 CTTCTCAGTGGAGTTGCAGCTGCCTCCCAAGGCTGCAGCCC CTTCTCAGTGGAGTTGCAGCTACCTCCCAAGGCTGCAGCCC < 41bp 0.548347296600372 0.89589622768826 0.62816536 0.8442973 prediction 0.695097862175775 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41003668 chr17:41003669 synonymous SNV . 0 22 hPsi_associated_SNPs_22422 0 0 0 0 0 Cytosol 0.438717289040826 0.438147710945208 0.43226388 0 hPsi_site_16146 iPseU_CNN:0.43226388;iRNA_PseU:0 16147 chr19 1270978 1270978 1 + G A THYM 1270977 + 1270957 1270997 41 TTTGTTGGAGGGCTGAGTTTTGACACCAATGAGCAGTCGCT TTTGTTGGAGGGCTGAGTTTTAACACCAATGAGCAGTCGCT < 41bp 0.443209313551101 0.847542153372384 0.51422036 0.72756636 prediction 0.695084306744768 Functional Gain - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1270977 chr19:1270978 nonsynonymous SNV 0.922 0 22 hPsi_associated_SNPs_22423 0 0 1 0 2 Ribosome 0.438718447435424 0.43871831858188 0.426692 0 hPsi_site_16147 iPseU_CNN:0.426692;iRNA_PseU:0 16148 chr11 15262015 15262015 1 + C A UCEC 15262014 + 15261994 15262034 41 CATGTCCCGTCTCATCGAGCTCTGCAGATCCCCATCAGAGA CATGTCCCGTCTCATCGAGCTATGCAGATCCCCATCAGAGA < 41bp 0.506129644672794 0.853668318253582 0.2432301 0.3661824 prediction 0.695077347161576 Functional Gain - INSC ENSG00000188487 CDS Human protein_coding chr11:15262014 chr11:15262015 synonymous SNV . 0 22 hPsi_associated_SNPs_22424 0 0 0 0 2 exosome 0.439324455545232 0.438717634111542 0 0 hPsi_site_16148 iPseU_CNN:0;iRNA_PseU:0 16149 chr17 46134783 46134783 1 + G A SKCM 46134782 + 46134762 46134802 41 TGCTCTTCAAAACAACCTCTTGTCTCCTCTTCTGACCGGGA TGCTCTTCAAAACAACCTCTTATCTCCTCTTCTGACCGGGA < 41bp 0.545825217959644 0.893348088791635 0.27070856 0.43987143 prediction 0.695045741663983 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46134782 chr17:46134783 synonymous SNV . 0 22 hPsi_associated_SNPs_22425 0 0 1 0 2 Ribosome 0.438718585554231 0.43871847755645 0 0 hPsi_site_16149 iPseU_CNN:0;iRNA_PseU:0 16150 chr14 59108434 59108434 1 + G A UCEC 59108433 + 59108413 59108453 41 CAGCCCCTTGGAGGCGACCTTGAGTCTCTCAGATGGTTGCC CAGCCCCTTGGAGGCGACCTTAAGTCTCTCAGATGGTTGCC < 41bp 0.541220635935135 0.888741457399856 0.29028457 0.5577674 prediction 0.695041642929441 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59108433 chr14:59108434 synonymous SNV . 0 22 hPsi_associated_SNPs_22426 0 0 0 0 1 exosome 0.438718011243293 0.43871430208555 0.1155348 0 hPsi_site_16150 iPseU_CNN:0.1155348;iRNA_PseU:0 16151 chr19 34832447 34832447 1 + C A UCEC 34832446 + 34832426 34832466 41 AGGTGGCCTGCAGAAGACATTCTCCAAACTGACATCCCGGT AGGTGGCCTGCAGAAGACATTATCCAAACTGACATCCCGGT < 41bp 0.50471224682563 0.852231397753453 0.28847998 0.46425766 prediction 0.695038301855646 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832446 chr19:34832447 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22427 0 0 1 0 0 Cytosol 0.438498605382479 0.438714692883854 0 0 hPsi_site_16151 iPseU_CNN:0;iRNA_PseU:0 16152 chr14 89343701 89343701 1 + G A UCEC 89343700 + 89343680 89343720 41 GAAGCAGCATTTCCAGACCATGTGGACACACAACATTTAAT GAAGCAGCATTTCCAGACCATATGGACACACAACATTTAAT < 41bp 0.467536334743677 0.847517301097713 0.19239125 0.34560546 prediction 0.695034602195426 Functional Gain - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89343700 chr14:89343701 nonsynonymous SNV 0.969 1 22 hPsi_associated_SNPs_22428 0 0 1 0 1 Nucleus 0.438464661960773 0.438556741959505 0 0 hPsi_site_16152 iPseU_CNN:0;iRNA_PseU:0 16153 chr1 226411754 226411754 1 + G A rs202018885 226411753 + 226411733 226411773 41 GCGCCTGGCCGCGCTCACCCTGCTCCCCGAGTCCAGGATCC GCGCCTGGCCGCGCTCACCCTACTCCCCGAGTCCAGGATCC < 41bp 0.5283232728404 0.875830266590008 0.23623711 0.70853853 prediction 0.695013987499216 Functional Gain - MIXL1 ENSG00000185155 CDS Human protein_coding chr1:226411753 chr1:226411754 synonymous SNV . 0 22 hPsi_associated_SNPs_22429 0 0 0 0 1 exosome 0.438718565765606 0.438712700737443 0.41707706 0 hPsi_site_16153 iPseU_CNN:0.41707706;iRNA_PseU:0 16154 chr2 173338941 173338941 1 + C A ACC 173338940 + 173338920 173338960 41 CACATATTCGATGGAGAAGGTCTGGCCTCTTCATTTGGCTA CACATATTCGATGGAGAAGGTATGGCCTCTTCATTTGGCTA < 41bp 0.500420402775542 0.847919531354177 0.24026513 0.45756322 prediction 0.694998257157269 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173338940 chr2:173338941 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22430 0 0 1 0 1 Nucleus 0.438718595457354 0.438718592995102 0 0 hPsi_site_16154 iPseU_CNN:0;iRNA_PseU:0 16155 chr15 42139675 42139675 1 + G A COAD 42139674 + 42139654 42139694 41 CCCCGGAGCCCCTGCGGTGCTGCACTTTCCTCTGGTCAGCG CCCCGGAGCCCCTGCGGTGCTACACTTTCCTCTGGTCAGCG < 41bp 0.537247705977305 0.88474305832819 0.3952925 0.75362056 prediction 0.694990704701769 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42139674 chr15:42139675 synonymous SNV . 0 22 hPsi_associated_SNPs_22431 0 0 0 0 1 unknown 0.438718592995036 0.438718592879004 0.50724112 0 hPsi_site_16155 iPseU_CNN:0.50724112;iRNA_PseU:0 16156 chr11 134014234 134014234 1 + G A UCEC 134014233 + 134014213 134014253 41 CTTTATCGCTGTGAGGTCGTTGCTCGAAATGACCGCAAGGA CTTTATCGCTGTGAGGTCGTTACTCGAAATGACCGCAAGGA < 41bp 0.455767801020653 0.847475719467705 0.31058913 0.9087435 prediction 0.69495143893541 Functional Gain - JAM3 ENSG00000166086 CDS Human protein_coding chr11:134014233 chr11:134014234 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_22432 0 0 1 0 2 nucleoplasm 0.438699629476833 0.438694841121883 0.817487 0 hPsi_site_16156 iPseU_CNN:0.817487;iRNA_PseU:0 16157 chr3 129236359 129236359 1 + G A CESC 129236358 + 129236338 129236378 41 CTGGAGGAAGGGATCACTGATGAAGAAGCCATCTCCCTCAT CTGGAGGAAGGGATCACTGATAAAGAAGCCATCTCCCTCAT < 41bp 0.468986511071046 0.847470473223366 0.5259485 0.74620295 prediction 0.694940946446732 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129236358 chr3:129236359 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_22433 0 0 1 0 2 Nucleus 0.438718656545045 0.438718592995074 0.4405089 0 hPsi_site_16157 iPseU_CNN:0.4405089;iRNA_PseU:0 16158 chr1 248308692 248308692 1 + G A SKCM 248308691 + 248308671 248308711 41 CTGCTCTACCGTACCCAAGATGGCCTTCAACTACTTGTCTG CTGCTCTACCGTACCCAAGATAGCCTTCAACTACTTGTCTG < 41bp 0.48112732066457 0.847456116220793 0.092776954 0.1563617 prediction 0.694912232441586 Functional Gain - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248308691 chr1:248308692 nonsynonymous SNV 0.022 1 22 hPsi_associated_SNPs_22434 0 0 0 0 0 unknown 0.438718597010245 0.438718595402659 0 0 hPsi_site_16158 iPseU_CNN:0;iRNA_PseU:0 16159 chr8 37620198 37620198 1 + G A COAD 37620197 + 37620177 37620217 41 GATGTGGAGAGCTGGCAGCATGTCGGCCGAGCTGGGAGTCG GATGTGGAGAGCTGGCAGCATATCGGCCGAGCTGGGAGTCG < 41bp 0.519529815513535 0.86698341049132 0.2937845 0.49759093 prediction 0.69490718995557 Functional Gain - PLPBP ENSG00000147471 CDS Human protein_coding chr8:37620197 chr8:37620198 nonsynonymous SNV 0.962 1 22 hPsi_associated_SNPs_22435 0 0 1 0 1 unknown 0.432520526159169 0.438499371323384 0 0 hPsi_site_16159 iPseU_CNN:0;iRNA_PseU:0 16160 chr17 61570930 61570930 1 + G A SKCM 61570929 + 61570909 61570949 41 GGTGCCAACCCCGGCTTCCATGAGGCCATTGGGGACGTGCT GGTGCCAACCCCGGCTTCCATAAGGCCATTGGGGACGTGCT < 41bp 0.539018991014979 0.8864638023882 0.24452859 0.2577641 prediction 0.694889622746443 Functional Gain - ACE ENSG00000159640;ENSG00000264813 CDS Human other chr17:61570929 chr17:61570930 nonsynonymous SNV 0.921 4 22 hPsi_associated_SNPs_22436 0 0 0 0 1 cytosol 0.438718587520064 0.438718593739937 0 0 hPsi_site_16160 iPseU_CNN:0;iRNA_PseU:0 16161 chr17 40948252 40948252 1 + G A THCA 40948251 + 40948231 40948271 41 TATTGTGGCCCCAGCTGCTATGCTGTCCAGCCGCCAGCGCC TATTGTGGCCCCAGCTGCTATACTGTCCAGCCGCCAGCGCC < 41bp 0.443446535917029 0.847437642193475 0.38160664 0.75302297 prediction 0.694875284386951 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40948251 chr17:40948252 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22437 0 0 0 0 1 chromatin 0.438718593798746 0.438718609422544 0.50604594 0 hPsi_site_16161 iPseU_CNN:0.50604594;iRNA_PseU:0 16162 chr11 70221090 70221090 1 + C T UCEC 70221091 - 70221071 70221111 41 CCACTCTCTATAAGATTGTTTGCATATTCTTTAAGGCCAAT CCACTCTCTATAAGATTGTTTACATATTCTTTAAGGCCAAT < 41bp 0.481073653026706 0.84743728526116 0.20208374 0.29554152 prediction 0.694874570522321 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70221091 chr11:70221090 nonsynonymous SNV 0.967 4 22 hPsi_associated_SNPs_22438 0 0 0 0 0 Ribosome 0.438720178745258 0.43871874430866 0 0 hPsi_site_16162 iPseU_CNN:0;iRNA_PseU:0 16163 chrX 64887543 64887543 1 + G A rs751658909 64887542 + 64887522 64887562 41 GCTCTTTCCTGGGTGGGGTTTGTGAAGTCGTGGCCCGTTAG GCTCTTTCCTGGGTGGGGTTTATGAAGTCGTGGCCCGTTAG < 41bp 0.522795729218451 0.870231456514333 0.39441693 0.6283501 prediction 0.694871454591765 Functional Gain - MSN ENSG00000147065 UTR5 Human protein_coding chrX:64887542 chrX:64887543 . . 0 22 hPsi_associated_SNPs_22439 0 0 0 0 0 Ribosome 0.438718802028513 0.438718217167782 0.2567002 0 hPsi_site_16163 iPseU_CNN:0.2567002;iRNA_PseU:0 16164 chr21 45548216 45548216 1 + G A rs79920267 45548215 + 45548195 45548235 41 CTTTGAAGTGTCTCGCCACCTGGAATTCTACCTCCTCTGGA CTTTGAAGTGTCTCGCCACCTAGAATTCTACCTCCTCTGGA < 41bp 0.452249495681184 0.847432385456921 0.22479436 0.30235568 prediction 0.694864770913841 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45548215 chr21:45548216 synonymous SNV . 0 22 hPsi_associated_SNPs_22440 0 0 1 0 2 Nucleus 0.438717507654611 0.43871859528671 0 0 hPsi_site_16164 iPseU_CNN:0;iRNA_PseU:0 16165 chr1 1267823 1267823 1 + G A BLCA 1267822 + 1267802 1267842 41 GGTGGCCAGCGAGGCCTGGCTGACCTCTGACCTGGTCATGG GGTGGCCAGCGAGGCCTGGCTAACCTCTGACCTGGTCATGG < 41bp 0.457680143785225 0.847426001544697 0.2369034 0.7069552 prediction 0.694852003089394 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1267822 chr1:1267823 synonymous SNV . 0 22 hPsi_associated_SNPs_22441 0 0 0 0 0 chromatin 0.438674040334332 0.438691498702434 0.4139104 0 hPsi_site_16165 iPseU_CNN:0.4139104;iRNA_PseU:0 16166 chr12 2930953 2930953 1 + G A UCEC 2930952 + 2930932 2930972 41 TTTGCCCTGGAGAAACTGGATGTCACCGTGAGTGGAAAACC TTTGCCCTGGAGAAACTGGATATCACCGTGAGTGGAAAACC < 41bp 0.450816328187216 0.847420837043776 0.34086195 0.60354924 prediction 0.694841674087551 Functional Gain - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2930952 chr12:2930953 nonsynonymous SNV 0.848 0 22 hPsi_associated_SNPs_22442 0 0 1 0 2 nucleoplasm 0.438551422505745 0.438789355744563 0.20709848 0 hPsi_site_16166 iPseU_CNN:0.20709848;iRNA_PseU:0 16167 chrX 140985229 140985229 1 + G A UCEC 140985228 + 140985208 140985248 41 TGATCTTCATAAAGGGCAGCTGTGTCCCCGAGGAGGTCATC TGATCTTCATAAAGGGCAGCTATGTCCCCGAGGAGGTCATC < 41bp 0.462716848827145 0.847417084966374 0.18347564 0.37184268 prediction 0.694834169932749 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140985228 chrX:140985229 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_22443 0 0 0 0 1 exosome 0.438721607499404 0.438389665663827 0 0 hPsi_site_16167 iPseU_CNN:0;iRNA_PseU:0 16168 chr22 26830398 26830398 1 + G A BLCA 26830397 + 26830377 26830417 41 TTTGGGAACGCGTGCATCTCTGTGCTGAGCCCTGGGACTGT TTTGGGAACGCGTGCATCTCTATGCTGAGCCCTGGGACTGT < 41bp 0.458395014692895 0.847409842965507 0.27714628 0.38636184 prediction 0.694819685931013 Functional Gain - ASPHD2 ENSG00000128203 CDS Human protein_coding chr22:26830397 chr22:26830398 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_22444 0 0 1 0 1 Endoplasmic reticulum 0.438733794211845 0.438720966046742 0 0 hPsi_site_16168 iPseU_CNN:0;iRNA_PseU:0 16169 chr5 10260964 10260964 1 + C A ESCA 10260963 + 10260943 10260983 41 GGCTTTGATGATGAAGCAAATCACTTACTTCTTCAGAACAA GGCTTTGATGATGAAGCAAATAACTTACTTCTTCAGAACAA < 41bp 0.500840629715266 0.848249594043594 0.3137057 0.56743056 prediction 0.694817928656657 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10260963 chr5:10260964 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22445 0 0 1 0 2 Cytosol 0.438183837606305 0.438753471786844 0.13486112 0 hPsi_site_16169 iPseU_CNN:0.13486112;iRNA_PseU:0 16170 chr20 31424521 31424521 1 + G A BLCA 31424520 + 31424500 31424540 41 TGGTTCAAGAAGTTTTTCGATGCAAACTATGATGGAAAAGA TGGTTCAAGAAGTTTTTCGATACAAACTATGATGGAAAAGA < 41bp 0.47605287350909 0.84740466460234 0.35345447 0.6219282 prediction 0.69480932920468 Functional Gain - MAPRE1 ENSG00000101367 CDS Human protein_coding chr20:31424520 chr20:31424521 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22446 0 0 1 0 1 Cytosol 0.438709602116616 0.438718107474024 0.2438564 0 hPsi_site_16170 iPseU_CNN:0.2438564;iRNA_PseU:0 16171 chr18 72188380 72188380 1 + G A rs749464 72188379 + 72188359 72188399 41 AAGAATCGCTCCATCTCAGTTGCTCGTCGCGTGCACACCAT AAGAATCGCTCCATCTCAGTTACTCGTCGCGTGCACACCAT < 41bp 0.517753801275736 0.865144065504186 0.23440701 0.7862302 prediction 0.694780528456899 Functional Gain - CNDP2 ENSG00000133313 downstream Human protein_coding chr18:72188379 chr18:72188380 . . 0 22 hPsi_associated_SNPs_22447 0 0 1 0 0 Ribosome 0.438745416083967 0.438726643450387 0.5724604 0 hPsi_site_16171 iPseU_CNN:0.5724604;iRNA_PseU:0 16172 chr12 105151419 105151419 1 + G A BLCA 105151418 + 105151398 105151438 41 GGCAGGAGTGGGCAGCTACCTGAAGTTCCCCACCTATGCAA GGCAGGAGTGGGCAGCTACCTAAAGTTCCCCACCTATGCAA < 41bp 0.469356597296487 0.847388561086972 0.16314778 0.27817512 prediction 0.694777122173945 Functional Gain - CHST11 ENSG00000171310 CDS Human protein_coding chr12:105151418 chr12:105151419 synonymous SNV . 0 22 hPsi_associated_SNPs_22448 0 0 0 0 0 Nucleus 0.438718589908489 0.43871859511947 0 0 hPsi_site_16172 iPseU_CNN:0;iRNA_PseU:0 16173 chr21 46066862 46066862 1 + G A SKCM 46066861 + 46066841 46066881 41 TGCTGTGTGTCCACCTGCTCTGAGGATTCCTCTTCATGCTG TGCTGTGTGTCCACCTGCTCTAAGGATTCCTCTTCATGCTG < 41bp 0.519269642943625 0.866654905784156 0.26752234 0.5935402 prediction 0.694770525681061 Functional Gain - KRTAP10-11 ENSG00000243489 CDS Human protein_coding chr21:46066861 chr21:46066862 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22449 0 0 0 0 0 unknown 0.438932204601724 0.438726020377465 0.1870804 0 hPsi_site_16173 iPseU_CNN:0.1870804;iRNA_PseU:0 16174 chr4 6826361 6826361 1 + G A LUSC 6826360 + 6826340 6826380 41 GCCATGATTTACACTCGGTATGTCCTCAGTCTTCTGCTGCA GCCATGATTTACACTCGGTATATCCTCAGTCTTCTGCTGCA < 41bp 0.46487878349411 0.847383841358034 0.6099145 0.64379275 prediction 0.694767682716068 Functional Gain - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6826360 chr4:6826361 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_22450 0 0 1 0 1 Nucleus 0.438727007125612 0.438719701847187 0.0677565 0 hPsi_site_16174 iPseU_CNN:0.0677565;iRNA_PseU:0 16175 chr12 47628858 47628858 1 + G A UCEC 47628857 + 47628837 47628877 41 CCTGGGCGTCATGATCCTTCTGCGGGCCTCCGAAGTGCGGC CCTGGGCGTCATGATCCTTCTACGGGCCTCCGAAGTGCGGC < 41bp 0.539571377772016 0.886951906787392 0.30668157 0.45574194 prediction 0.69476105803075 Functional Gain - PCED1B ENSG00000179715 CDS Human protein_coding chr12:47628857 chr12:47628858 synonymous SNV . 0 22 hPsi_associated_SNPs_22451 0 0 0 0 1 Nucleus 0.438726713317793 0.438730185642102 0 0 hPsi_site_16175 iPseU_CNN:0;iRNA_PseU:0 16176 chr16 601387 601387 1 + G A UCEC 601386 + 601366 601406 41 CTGGGCCTGCGCCCCCGGCATGCCTACTCCATCCTGGATGT CTGGGCCTGCGCCCCCGGCATACCTACTCCATCCTGGATGT < 41bp 0.458455525943452 0.847376550737142 0.411533 0.876881 prediction 0.694753101474284 Functional Gain - CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601386 chr16:601387 nonsynonymous SNV 0.936 5 22 hPsi_associated_SNPs_22452 0 0 1 0 2 chromatin 0.438718589948869 0.438691755547075 0.753762 0 hPsi_site_16176 iPseU_CNN:0.753762;iRNA_PseU:0 16177 chr19 41086301 41086301 1 + G A UCEC 41086300 + 41086280 41086320 41 CTAGGAGGACGGCCAGCCCCTGTCCGACGGAGCAACACGAT CTAGGAGGACGGCCAGCCCCTATCCGACGGAGCAACACGAT < 41bp 0.43395520318094 0.847371498594056 0.29539442 0.35710078 prediction 0.694742997188112 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41086300 chr19:41086301 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_22453 0 0 1 0 2 Ribosome 0.439061781229263 0.438818392200498 0 0 hPsi_site_16177 iPseU_CNN:0;iRNA_PseU:0 16178 chr22 21237800 21237800 1 + G A LGG 21237799 + 21237779 21237819 41 GGTTCTGCCATGAGTACTGATGCTTACCCAAAGAACCCACA GGTTCTGCCATGAGTACTGATACTTACCCAAAGAACCCACA < 41bp 0.443134750354949 0.847368553254773 0.21738657 0.32952172 prediction 0.694737106509546 Functional Gain - SNAP29 ENSG00000099940 CDS Human protein_coding chr22:21237799 chr22:21237800 nonsynonymous SNV 0.455 0 22 hPsi_associated_SNPs_22454 0 0 1 0 2 Ribosome 0.438717071030029 0.438720649875437 0 0 hPsi_site_16178 iPseU_CNN:0;iRNA_PseU:0 16179 chr7 23239972 23239972 1 + G A BLCA 23239971 + 23239951 23239991 41 GCTTTTGGATTTGGGAAGCCTGAAGTCACATCGGCTGCATC GCTTTTGGATTTGGGAAGCCTAAAGTCACATCGGCTGCATC < 41bp 0.473163085224345 0.847367026480074 0.1661425 0.2607553 prediction 0.694734052960147 Functional Gain - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23239971 chr7:23239972 nonsynonymous SNV 0.935 0 22 hPsi_associated_SNPs_22455 0 0 1 0 0 Cytosol 0.438718881345621 0.438718771760907 0 0 hPsi_site_16179 iPseU_CNN:0;iRNA_PseU:0 16180 chr6 167708144 167708144 1 + G A rs574762533 167708143 + 167708123 167708163 41 GGACCATCATCCTCTCCATGTGTGGCTACGTGGCCTTCTCC GGACCATCATCCTCTCCATGTATGGCTACGTGGCCTTCTCC < 41bp 0.544657124899192 0.892022095872898 0.44329387 0.70200133 prediction 0.694729941947412 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167708143 chr6:167708144 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_22456 0 0 1 0 1 cytosol 0.438728462965146 0.438717722790027 0.40400266 0 hPsi_site_16180 iPseU_CNN:0.40400266;iRNA_PseU:0 16181 chr20 17956482 17956482 1 + G A LUSC 17956481 + 17956461 17956501 41 GTCAGTGGAGTGCGAGCTCTTGAAAGTGCTGTTCAACATGA GTCAGTGGAGTGCGAGCTCTTAAAAGTGCTGTTCAACATGA < 41bp 0.532797556570926 0.880160411701881 0.20136818 0.25708255 prediction 0.694725710261908 Functional Gain - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17956481 chr20:17956482 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_22457 0 0 1 2 1 chromatin 0.438462117469692 0.438628756762879 0 0 hPsi_site_16181 iPseU_CNN:0;iRNA_PseU:0 16182 chr10 134015504 134015504 1 + G A COAD 134015503 + 134015483 134015523 41 GCGGTGACCAGTACAAATGCTGCCAAAATCTTCAATTTTTA GCGGTGACCAGTACAAATGCTACCAAAATCTTCAATTTTTA < 41bp 0.542880506492029 0.890239969253294 0.32515818 0.6662228 prediction 0.694718925522532 Functional Gain - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134015503 chr10:134015504 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22458 0 0 1 0 1 Endoplasmic reticulum 0.438715984032529 0.438703431565978 0.3324456 0 hPsi_site_16182 iPseU_CNN:0.3324456;iRNA_PseU:0 16183 chr2 27599575 27599575 1 + G A BLCA 27599574 + 27599554 27599594 41 GCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACT GCCTTCGAGGGCATTGGAGATAAGGATCTGTAATCTCCACT < 41bp 0.521957411556046 0.869313224124288 0.27671355 0.34347245 prediction 0.694711625136484 Functional Gain - SNX17 ENSG00000115234 CDS Human protein_coding chr2:27599574 chr2:27599575 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22459 0 0 1 0 0 Ribosome 0.438547964567766 0.438770288637262 0 0 hPsi_site_16183 iPseU_CNN:0;iRNA_PseU:0 16184 chr5 74069803 74069803 1 + G A rs144675267 74069802 + 74069782 74069822 41 ATCCCCACTGTATACAACTTTGGGTGTTATTACCAAAGGTA ATCCCCACTGTATACAACTTTAGGTGTTATTACCAAAGGTA < 41bp 0.46549596211837 0.847354471482869 0.2988908 0.6429793 prediction 0.694708942965738 Functional Gain - NSA2 ENSG00000164346 CDS Human protein_coding chr5:74069802 chr5:74069803 synonymous SNV . 0 22 hPsi_associated_SNPs_22460 0 0 1 0 1 Cytosol 0.438718592994922 0.438688329439657 0.2859586 0 hPsi_site_16184 iPseU_CNN:0.2859586;iRNA_PseU:0 16185 chr16 722956 722956 1 + G A UCEC 722955 + 722935 722975 41 ACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTCCAAG ACATGGACGGGCAGACCCCCTACCTCTTTGTCTCCTCCAAG < 41bp 0.449262766602453 0.847354184347809 0.2463721 0.28796217 prediction 0.694708368695618 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722955 chr16:722956 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_22461 0 0 1 0 1 Ribosome 0.43871857949536 0.43871863724056 0 0 hPsi_site_16185 iPseU_CNN:0;iRNA_PseU:0 16186 chr16 30095076 30095076 1 + G A COAD 30095075 + 30095055 30095095 41 TGCCTCATGATGGGCCCATGTGTGACCTCCTCTGGTCTGAC TGCCTCATGATGGGCCCATGTATGACCTCCTCTGGTCTGAC < 41bp 0.547550518872946 0.894904265058858 0.47024107 0.6430814 prediction 0.694707492371825 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30095075 chr16:30095076 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_22462 0 0 1 2 1 Ribosome 0.438718613382994 0.438718593966956 0.2861628 0 hPsi_site_16186 iPseU_CNN:0.2861628;iRNA_PseU:0 16187 chr7 100485056 100485056 1 + G A HNSC 100485055 + 100485035 100485075 41 CAAAGACCCAGAGCAGGAAGTGGAGAAGTTCGTCACCTCCA CAAAGACCCAGAGCAGGAAGTAGAGAAGTTCGTCACCTCCA < 41bp 0.436046111446861 0.847345667136884 0.23169374 0.3351788 prediction 0.694691334273769 Functional Gain - SRRT ENSG00000087087 CDS Human protein_coding chr7:100485055 chr7:100485056 synonymous SNV . 0 22 hPsi_associated_SNPs_22463 0 0 1 0 1 Nucleus 0.438716157596 0.438684542072967 0 0 hPsi_site_16187 iPseU_CNN:0;iRNA_PseU:0 16188 chr7 1097604 1097604 1 + G A rs200769532 1097603 + 1097583 1097623 41 GCGGCACGTGTGCGGCTTCGTGTGGGGTGGCGCGCTGCTGA GCGGCACGTGTGCGGCTTCGTATGGGGTGGCGCGCTGCTGA < 41bp 0.538622755122462 0.885957983430242 0.33676875 0.76542956 prediction 0.694670456615561 Functional Gain - GPR146 ENSG00000164849 CDS Human protein_coding chr7:1097603 chr7:1097604 synonymous SNV . 0 22 hPsi_associated_SNPs_22464 0 0 0 0 0 Endoplasmic reticulum 0.438716123377454 0.438858616896341 0.53085912 0 hPsi_site_16188 iPseU_CNN:0.53085912;iRNA_PseU:0 16189 chr19 10556972 10556972 1 + G A UCEC 10556971 + 10556951 10556991 41 GGCGAGCCCAGGACTCGTGCTGCACGCCGGGGCGGCCACCA GGCGAGCCCAGGACTCGTGCTACACGCCGGGGCGGCCACCA < 41bp 0.444672205645361 0.847327079825229 0.21016255 0.682057 prediction 0.694654159650459 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10556971 chr19:10556972 synonymous SNV . 0 22 hPsi_associated_SNPs_22465 0 0 0 0 1 chromatin 0.438529852883874 0.436388824755621 0.364114 0 hPsi_site_16189 iPseU_CNN:0.364114;iRNA_PseU:0 16190 chr4 164272144 164272144 1 + G A CESC 164272143 + 164272123 164272163 41 GTGTCTGCAGAAGTATAAGCTGTGGATTGTCCAACAAAGAA GTGTCTGCAGAAGTATAAGCTATGGATTGTCCAACAAAGAA < 41bp 0.530173804620319 0.877496036309236 0.21888453 0.20449221 prediction 0.694644463377834 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272143 chr4:164272144 nonsynonymous SNV 0.322 0 22 hPsi_associated_SNPs_22466 0 0 0 0 0 unknown 0.438688274601953 0.438718548601644 0 0 hPsi_site_16190 iPseU_CNN:0;iRNA_PseU:0 16191 chr11 77920718 77920718 1 + G A GBM 77920717 + 77920697 77920737 41 CCTTCCCTCCTCCTGAGCGCTGTCGCCGCCGCCGCCTGGGC CCTTCCCTCCTCCTGAGCGCTATCGCCGCCGCCGCCTGGGC < 41bp 0.549011188950489 0.896333327682139 0.16870081 0.38532612 prediction 0.694644277463301 Functional Gain - USP35 ENSG00000118369 CDS Human protein_coding chr11:77920717 chr11:77920718 nonsynonymous SNV 0.937 0 22 hPsi_associated_SNPs_22467 0 0 1 0 0 nucleolus 0.438718591229698 0.438718592610427 0 0 hPsi_site_16191 iPseU_CNN:0;iRNA_PseU:0 16192 chr21 31812745 31812745 1 + G A OV 31812744 + 31812724 31812764 41 AATTTGTTCTACCCCAGCAATGCCATCTATTCTCCAAATAC AATTTGTTCTACCCCAGCAATACCATCTATTCTCCAAATAC < 41bp 0.493980640215325 0.847315826721236 0.25765413 0.30082047 prediction 0.694631653442471 Functional Gain - KRTAP15-1 ENSG00000186970 CDS Human protein_coding chr21:31812744 chr21:31812745 nonsynonymous SNV 0.296 1 22 hPsi_associated_SNPs_22468 0 0 0 0 0 unknown 0.438709126579312 0.438706331254895 0 0 hPsi_site_16192 iPseU_CNN:0;iRNA_PseU:0 16193 chr20 31829216 31829216 1 + C A UCEC 31829215 + 31829195 31829235 41 GGCCCCCTCCCCATTCAAGGTCTTCTGGACAGCCTCACAGG GGCCCCCTCCCCATTCAAGGTATTCTGGACAGCCTCACAGG < 41bp 0.50556468837617 0.852876981887879 0.35513413 0.6927601 prediction 0.694624587023418 Functional Gain - BPIFA1 ENSG00000198183 CDS Human protein_coding chr20:31829215 chr20:31829216 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_22469 0 0 0 0 2 unknown 0.438718792473088 0.438717269076469 0.3855202 0 hPsi_site_16193 iPseU_CNN:0.3855202;iRNA_PseU:0 16194 chr19 11559946 11559946 1 + G A HNSC 11559945 + 11559925 11559965 41 AAGTTCAGTGCCATGAAGTATGAGCAAGGCACGGGCTGCTG AAGTTCAGTGCCATGAAGTATAAGCAAGGCACGGGCTGCTG < 41bp 0.448367284567697 0.847311362395105 0.5001178 0.82776403 prediction 0.694622724790211 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559945 chr19:11559946 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_22470 0 0 1 0 2 Nucleus 0.438718591417017 0.438717522080894 0.65529246 0 hPsi_site_16194 iPseU_CNN:0.65529246;iRNA_PseU:0 16195 chr16 10851756 10851756 1 + G A rs148599400 10851755 + 10851735 10851775 41 ATCAAGCAGTTCCTCCGAGATGTGGACTGGGGAGAGGTCGA ATCAAGCAGTTCCTCCGAGATATGGACTGGGGAGAGGTCGA < 41bp 0.548354203200408 0.895655517419445 0.22134742 0.2504957 prediction 0.694602628438074 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10851755 chr16:10851756 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_22471 0 0 0 0 1 Ribosome 0.439874194520554 0.43996805164345 0 0 hPsi_site_16195 iPseU_CNN:0;iRNA_PseU:0 16196 chr22 37699389 37699389 1 + G A SKCM 37699388 + 37699368 37699408 41 GCCGCCTTTTGAGCGCTTTGTGTCCATGAACCGCGGCATCA GCCGCCTTTTGAGCGCTTTGTATCCATGAACCGCGGCATCA < 41bp 0.431045214399362 0.8472966537793 0.1549212 0.39683732 prediction 0.694593307558601 Functional Gain - CYTH4 ENSG00000100055 CDS Human protein_coding chr22:37699388 chr22:37699389 synonymous SNV . 0 22 hPsi_associated_SNPs_22472 0 0 0 0 2 exosome 0.438600044908738 0.438205957661421 0 0 hPsi_site_16196 iPseU_CNN:0;iRNA_PseU:0 16197 chr6 44118340 44118340 1 + C A UCEC 44118339 + 44118319 44118359 41 CTGGCTCTTTGATAAGAAATTCTTGGCTGAGGCAGCTATTC CTGGCTCTTTGATAAGAAATTATTGGCTGAGGCAGCTATTC < 41bp 0.50707146456745 0.854367157870652 0.3835692 0.44987997 prediction 0.694591386606404 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44118339 chr6:44118340 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22473 0 0 1 1 2 Ribosome 0.438959959549253 0.438715877275712 0 0 hPsi_site_16197 iPseU_CNN:0;iRNA_PseU:0 16198 chr3 129202444 129202444 1 + G A STAD 129202443 + 129202423 129202463 41 CCCTGTGCACCGGCAGAAGCTGCAGGGCTTTGTGGTCGGCT CCCTGTGCACCGGCAGAAGCTACAGGGCTTTGTGGTCGGCT < 41bp 0.535322536891474 0.882595732861426 0.40562332 0.6936996 prediction 0.694546391939903 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129202443 chr3:129202444 synonymous SNV . 0 22 hPsi_associated_SNPs_22474 0 0 0 0 1 Nucleus 0.438718689491803 0.438718596549224 0.3873992 0 hPsi_site_16198 iPseU_CNN:0.3873992;iRNA_PseU:0 16199 chr1 12010430 12010430 1 + G A OV 12010429 + 12010409 12010449 41 CACAGCTATGACGTGCTGTTTGCATCGGGGCCCCGGGAGCT CACAGCTATGACGTGCTGTTTACATCGGGGCCCCGGGAGCT < 41bp 0.544162216380249 0.891429712360671 0.33280826 0.6713649 prediction 0.694534991960845 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12010429 chr1:12010430 nonsynonymous SNV 0.813 2 22 hPsi_associated_SNPs_22475 0 0 1 0 1 Nucleus 0.43871911185022 0.438722150417874 0.3427298 0 hPsi_site_16199 iPseU_CNN:0.3427298;iRNA_PseU:0 16200 chr14 74425722 74425722 1 + C T LUSC 74425723 - 74425703 74425743 41 CATAGTTCCAGCTCACATTCTGGATTCCAACAGCCTGCCGT CATAGTTCCAGCTCACATTCTAGATTCCAACAGCCTGCCGT < 41bp 0.456669659109747 0.847262700269494 0.34873945 0.62798476 prediction 0.694525400538988 Functional Gain - COQ6 ENSG00000119723 CDS Human protein_coding chr14:74425723 chr14:74425722 stopgain 1.000 0 22 hPsi_associated_SNPs_22476 0 0 0 0 0 Ribosome 0.408950065311679 0.43885903237528 0.25596952 0 hPsi_site_16200 iPseU_CNN:0.25596952;iRNA_PseU:0 16201 chr10 116620591 116620591 1 + G A CESC 116620590 + 116620570 116620610 41 ACACATCCACGAGTACCTTTTGGATCCTTACGTGAACCTCG ACACATCCACGAGTACCTTTTAGATCCTTACGTGAACCTCG < 41bp 0.450148339143227 0.847258381717926 0.13798937 0.30229247 prediction 0.694516763435852 Functional Gain - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116620590 chr10:116620591 synonymous SNV . 0 22 hPsi_associated_SNPs_22477 0 0 1 0 1 nucleoplasm 0.438701043256643 0.438718532702601 0 0 hPsi_site_16201 iPseU_CNN:0;iRNA_PseU:0 16202 chrX 48460204 48460204 1 + G A BLCA 48460203 + 48460183 48460223 41 CAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGA CAAGCACAACGTGCATGTCATAAACATCTCCACAGGCAAGA < 41bp 0.442766827640609 0.847251338921214 0.20399132 0.2723691 prediction 0.694502677842428 Functional Gain - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48460203 chrX:48460204 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22478 0 0 1 0 1 Ribosome 0.458736927682958 0.431541150211711 0 0 hPsi_site_16202 iPseU_CNN:0;iRNA_PseU:0 16203 chr12 6566693 6566693 1 + G A UCEC 6566692 + 6566672 6566712 41 CATCAGTGTGGAGTGGCGACTGCAGCACAAGGGCAGGGGTC CATCAGTGTGGAGTGGCGACTACAGCACAAGGGCAGGGGTC < 41bp 0.450592550670841 0.847246597365044 0.33716828 0.44600946 prediction 0.694493194730088 Functional Gain - TAPBPL ENSG00000139192 CDS Human protein_coding chr12:6566692 chr12:6566693 synonymous SNV . 0 22 hPsi_associated_SNPs_22479 0 0 1 0 1 chromatin 0.438718593085158 0.438718565166906 0 0 hPsi_site_16203 iPseU_CNN:0;iRNA_PseU:0 16204 chr11 61976227 61976227 1 + G A LUSC 61976226 + 61976206 61976246 41 GAAGCTGCTGATGGTCCTCATGCTGGCGGCCCTCCTCCTGC GAAGCTGCTGATGGTCCTCATACTGGCGGCCCTCCTCCTGC < 41bp 0.468125733245983 0.847245333842095 0.24546736 0.31754524 prediction 0.69449066768419 Functional Gain - SCGB2A1 ENSG00000124939 CDS Human protein_coding chr11:61976226 chr11:61976227 nonsynonymous SNV 0.053 1 22 hPsi_associated_SNPs_22480 0 0 0 0 1 unknown 0.43871859310457 0.438718592984565 0 0 hPsi_site_16204 iPseU_CNN:0;iRNA_PseU:0 16205 chr16 67304909 67304909 1 + C A LUSC 67304908 + 67304888 67304928 41 TGAAGAGCCCCAGGTCCCTCTCCACCTACCTTCTGATCCAC TGAAGAGCCCCAGGTCCCTCTACACCTACCTTCTGATCCAC < 41bp 0.506047731197019 0.853281643361289 0.23624632 0.5490801 prediction 0.694467824328541 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67304908 chr16:67304909 synonymous SNV . 0 22 hPsi_associated_SNPs_22481 0 0 0 0 0 Cytosol 0.438717235179043 0.438718593022671 0.0981601999999999 0 hPsi_site_16205 iPseU_CNN:0.0981601999999999;iRNA_PseU:0 16206 chr16 88666326 88666326 1 + C A UCEC 88666325 + 88666305 88666345 41 AAGTTTTTCGAGATTGGAATTCTCGGATCCCGAGAGATGTC AAGTTTTTCGAGATTGGAATTATCGGATCCCGAGAGATGTC < 41bp 0.504748837347395 0.851978336512564 0.28317776 0.362114 prediction 0.69445899833034 Functional Gain - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88666325 chr16:88666326 nonsynonymous SNV 0.848 0 22 hPsi_associated_SNPs_22482 0 0 1 0 0 chromatin 0.438765128343283 0.44500186625375 0 0 hPsi_site_16206 iPseU_CNN:0;iRNA_PseU:0 16207 chr14 20943381 20943381 1 + G A LUSC 20943380 + 20943360 20943400 41 GAGACTGTGGCAGAATGTCGTGTGCTGCAGAAGCTGGGAGC GAGACTGTGGCAGAATGTCGTATGCTGCAGAAGCTGGGAGC < 41bp 0.546867155538495 0.894096529774906 0.25275394 0.38882014 prediction 0.694458748472822 Functional Gain - PNP ENSG00000198805 CDS Human protein_coding chr14:20943380 chr14:20943381 nonsynonymous SNV 0.434 1 22 hPsi_associated_SNPs_22483 0 0 1 0 1 Ribosome 0.438723165298263 0.438908723263688 0 0 hPsi_site_16207 iPseU_CNN:0;iRNA_PseU:0 16208 chr7 299820 299820 1 + G A UCEC 299819 + 299799 299839 41 CGTGCTGTACCAGCCGCACCTGGAGGCCCTGGACCGGCGGC CGTGCTGTACCAGCCGCACCTAGAGGCCCTGGACCGGCGGC < 41bp 0.467783338274723 0.847213044885634 0.44095156 0.51652086 prediction 0.694426089771267 Functional Gain - FAM20C ENSG00000177706 CDS Human protein_coding chr7:299819 chr7:299820 synonymous SNV . 0 22 hPsi_associated_SNPs_22484 0 0 1 0 0 Ribosome 0.438600579491915 0.438723538807183 0.0330417199999999 0 hPsi_site_16208 iPseU_CNN:0.0330417199999999;iRNA_PseU:0 16209 chr1 166818775 166818775 1 + C A UCEC 166818774 + 166818754 166818794 41 TGATGAGAAGGTATGACCTGTCTCTGAGGCATAAAGTGCCC TGATGAGAAGGTATGACCTGTATCTGAGGCATAAAGTGCCC < 41bp 0.517821919485799 0.86502964122026 0.30081952 0.7069466 prediction 0.694415443468922 Functional Gain - POGK ENSG00000143157 CDS Human protein_coding chr1:166818774 chr1:166818775 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_22485 0 0 1 0 0 Nucleus 0.435606985146288 0.438718386891698 0.4138932 0 hPsi_site_16209 iPseU_CNN:0.4138932;iRNA_PseU:0 16210 chr14 104573539 104573539 1 + G A SKCM 104573538 + 104573518 104573558 41 GGGCAGTGACCTGGGCCTGGTGGACTTTAACGGCCAAACCC GGGCAGTGACCTGGGCCTGGTAGACTTTAACGGCCAAACCC < 41bp 0.535396914041727 0.882595103424718 0.3319956 0.77060646 prediction 0.694396378765982 Functional Gain - ASPG ENSG00000166183 CDS Human protein_coding chr14:104573538 chr14:104573539 synonymous SNV . 0 22 hPsi_associated_SNPs_22486 0 0 0 0 1 exosome 0.438718592995102 0.438718570722479 0.54121292 0 hPsi_site_16210 iPseU_CNN:0.54121292;iRNA_PseU:0 16211 chr1 26752948 26752948 1 + G A SKCM 26752947 + 26752927 26752967 41 TGCTCCCGGAGGCACAGAATTGAGCCACAATGGGTGGGGGC TGCTCCCGGAGGCACAGAATTAAGCCACAATGGGTGGGGGC < 41bp 0.482910827148559 0.847195597818147 0.27602142 0.40501353 prediction 0.694391195636294 Functional Gain - LIN28A ENSG00000131914 CDS Human protein_coding chr1:26752947 chr1:26752948 synonymous SNV . 0 22 hPsi_associated_SNPs_22487 0 0 1 0 0 Nucleus 0.438693783177977 0.438718615795163 0 0 hPsi_site_16211 iPseU_CNN:0;iRNA_PseU:0 16212 chr18 61233917 61233917 1 + G A LUSC 61233916 + 61233896 61233936 41 GTCAGAAGAATCGGTGGTCCTGTCCTTCCCCCGGTTCACCC GTCAGAAGAATCGGTGGTCCTATCCTTCCCCCGGTTCACCC < 41bp 0.456774804537482 0.847192365358767 0.2506259 0.77171385 prediction 0.694384730717534 Functional Gain - SERPINB12 ENSG00000166634 CDS Human protein_coding chr18:61233916 chr18:61233917 synonymous SNV . 0 22 hPsi_associated_SNPs_22488 0 0 0 0 1 exosome 0.438714666668746 0.438715695995553 0.5434277 0 hPsi_site_16212 iPseU_CNN:0.5434277;iRNA_PseU:0 16213 chr4 73013063 73013063 1 + C A UCEC 73013062 + 73013042 73013082 41 AGGAGCAGTGGCACGTGGTGTCCAGGAAGAAGCAGAAGATC AGGAGCAGTGGCACGTGGTGTACAGGAAGAAGCAGAAGATC < 41bp 0.510841924166176 0.858033172705649 0.22333434 0.54936475 prediction 0.694382497078946 Functional Gain - NPFFR2 ENSG00000056291 CDS Human protein_coding chr4:73013062 chr4:73013063 nonsynonymous SNV 0.815 1 22 hPsi_associated_SNPs_22489 0 0 0 0 0 nucleoplasm 0.438717785392728 0.438686541446737 0.0987294999999999 0 hPsi_site_16213 iPseU_CNN:0.0987294999999999;iRNA_PseU:0 16214 chr12 58016682 58016682 1 + G A LGG 58016681 + 58016661 58016701 41 GCCTCCCTGGCCTCCATCCATGCAGACAAGTATAGCTACAC GCCTCCCTGGCCTCCATCCATACAGACAAGTATAGCTACAC < 41bp 0.541286818225765 0.888475490063733 0.20448452 0.34629792 prediction 0.694377343675936 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58016681 chr12:58016682 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22490 0 0 0 0 1 chromatin 0.438669511010829 0.43843390990919 0 0 hPsi_site_16214 iPseU_CNN:0;iRNA_PseU:0 16215 chr15 99671728 99671728 1 + G A BLCA 99671727 + 99671707 99671747 41 GGCAGCCCAGATGAGGAAGGTGGAGCGGAGGCCCCGGCTGC GGCAGCCCAGATGAGGAAGGTAGAGCGGAGGCCCCGGCTGC < 41bp 0.46176695393253 0.847176051065839 0.28116727 0.6597943 prediction 0.694352102131678 Functional Gain - SYNM ENSG00000182253 CDS Human protein_coding chr15:99671727 chr15:99671728 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_22491 0 0 0 0 0 exosome 0.438718592464282 0.438718593018336 0.3195886 0 hPsi_site_16215 iPseU_CNN:0.3195886;iRNA_PseU:0 16216 chr11 118405454 118405454 1 + G A rs146720659 118405453 + 118405433 118405473 41 CCTCCATGTCATGCACGTGATGCATTTCACTGGGCTGTAAC CCTCCATGTCATGCACGTGATACATTTCACTGGGCTGTAAC < 41bp 0.487766677172568 0.847171905978781 0.33308467 0.63183594 prediction 0.694343811957562 Functional Gain - TMEM25 ENSG00000149582 UTR3 Human protein_coding chr11:118405453 chr11:118405454 . . 0 22 hPsi_associated_SNPs_22492 0 0 0 1 0 Nucleus 0.438724972329063 0.438719183817388 0.26367188 0 hPsi_site_16216 iPseU_CNN:0.26367188;iRNA_PseU:0 16217 chr1 233113938 233113938 1 + G A HNSC 233113937 + 233113917 233113957 41 GGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCG GGAAAACAGAAACCACCTTCTACCAGATATCGTGACGTGCG < 41bp 0.456654354803583 0.84716879791467 0.24710852 0.5211689 prediction 0.69433759582934 Functional Gain - NTPCR ENSG00000135778 CDS Human protein_coding chr1:233113937 chr1:233113938 synonymous SNV . 0 22 hPsi_associated_SNPs_22493 0 0 1 0 1 Ribosome 0.438729500473268 0.438718654046592 0.0423378000000001 0 hPsi_site_16217 iPseU_CNN:0.0423378000000001;iRNA_PseU:0 16218 chr12 9393002 9393002 1 + G A UCEC 9393001 + 9392981 9393021 41 AGGGACTCTGGCGATAAAGCTGCCGGAGTCCGCGGCGGCGG AGGGACTCTGGCGATAAAGCTACCGGAGTCCGCGGCGGCGG < 41bp 0.499425156115697 0.847167323659213 0.37179857 0.6907297 prediction 0.694334647318426 Functional Gain - LINC00987 ENSG00000237248 ncRNA_exonic Human lincRNA chr12:9393001 chr12:9393002 . . 0 22 hPsi_associated_SNPs_22494 0 0 0 0 0 unknown 0.438716880208717 0.438687411243334 0.3814594 0 hPsi_site_16218 iPseU_CNN:0.3814594;iRNA_PseU:0 16219 chr14 59113176 59113176 1 + G A UCEC 59113175 + 59113155 59113195 41 CGCGGGCCGGGAGCAAGAAGTGTCGCTTCCCAGATGACTTG CGCGGGCCGGGAGCAAGAAGTATCGCTTCCCAGATGACTTG < 41bp 0.440886555326319 0.84716684403043 0.38332975 0.6432443 prediction 0.69433368806086 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113175 chr14:59113176 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_22495 0 0 1 0 0 exosome 0.4387185878034 0.438718588913129 0.2864886 0 hPsi_site_16219 iPseU_CNN:0.2864886;iRNA_PseU:0 16220 chrX 27765754 27765754 1 + G A SARC 27765753 + 27765733 27765773 41 ACCCGGCTGGCCAGTAGCGGTGATGACCTAAAGGTGATAGT ACCCGGCTGGCCAGTAGCGGTAATGACCTAAAGGTGATAGT < 41bp 0.451746530599837 0.847159575619208 0.42843688 0.83858365 prediction 0.694319151238417 Functional Gain - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27765753 chrX:27765754 nonsynonymous SNV 0.696 2 22 hPsi_associated_SNPs_22496 0 0 0 0 0 exosome 0.438718593006388 0.438718592995102 0.6771673 0 hPsi_site_16220 iPseU_CNN:0.6771673;iRNA_PseU:0 16221 chr17 7851573 7851573 1 + C A COAD 7851572 + 7851552 7851592 41 CCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCCCTGAGCC CCCTTAGCCATGGCATCCAGTATTTTCCGGGTCCCTGAGCC < 41bp 0.509471532224692 0.856631000151253 0.21274844 0.3377217 prediction 0.694318935853121 Functional Gain - CNTROB ENSG00000170037 CDS Human protein_coding chr17:7851572 chr17:7851573 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_22497 0 0 1 0 2 Nucleus 0.438718592995317 0.438718633114329 0 0 hPsi_site_16221 iPseU_CNN:0;iRNA_PseU:0 16222 chr19 52272151 52272151 1 + C A BLCA 52272150 + 52272130 52272170 41 TTTCACGGCCACATTACCATTCCTCATTGTCTCCATGGCCA TTTCACGGCCACATTACCATTACTCATTGTCTCCATGGCCA < 41bp 0.49705980602004 0.847157717894405 0.2598008 0.443345 prediction 0.694315435788811 Functional Gain - FPR2 ENSG00000171049 CDS Human protein_coding chr19:52272150 chr19:52272151 nonsynonymous SNV 0.482 0 22 hPsi_associated_SNPs_22498 0 0 0 0 0 exosome 0.438833340178886 0.43780870671097 0 0 hPsi_site_16222 iPseU_CNN:0;iRNA_PseU:0 16223 chr4 1389037 1389037 1 + G A rs76723438 1389036 + 1389016 1389056 41 CGCCTGCTCACACGTGCCCATGTGGAGTGCCCGCCTGCTCA CGCCTGCTCACACGTGCCCATATGGAGTGCCCGCCTGCTCA < 41bp 0.506910456035285 0.854065257196362 0.2903185 0.33517128 prediction 0.694309602322154 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389036 chr4:1389037 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_22499 0 0 1 0 0 chromatin 0.437642407877856 0.438219317266111 0 0 hPsi_site_16223 iPseU_CNN:0;iRNA_PseU:0 16224 chr6 83075648 83075648 1 + G A rs116918788 83075647 + 83075627 83075667 41 GGCAAAGACCGGCTCACCTGTGCATATCCGGAAAAAATGAG GGCAAAGACCGGCTCACCTGTACATATCCGGAAAAAATGAG < 41bp 0.470471329047736 0.847142932413344 0.47693187 0.8646015 prediction 0.694285864826687 Functional Gain - TPBG ENSG00000146242 CDS Human protein_coding chr6:83075647 chr6:83075648 nonsynonymous SNV 0.358 1 22 hPsi_associated_SNPs_22500 0 0 1 0 0 Ribosome 0.438718791366449 0.438719292468737 0.729203 0 hPsi_site_16224 iPseU_CNN:0.729203;iRNA_PseU:0 16225 chr9 130912595 130912595 1 + G A UCEC 130912594 + 130912574 130912614 41 AAAGACCCGCAAAAGATGTATGCCACCATCTATGAGCTGAA AAAGACCCGCAAAAGATGTATACCACCATCTATGAGCTGAA < 41bp 0.533612925094454 0.880734978124709 0.32668328 0.6514497 prediction 0.694244106060511 Functional Gain - LCN2 ENSG00000148346 CDS Human protein_coding chr9:130912594 chr9:130912595 nonsynonymous SNV 0.108 0 22 hPsi_associated_SNPs_22501 0 0 0 0 1 Endoplasmic reticulum 0.438718592970268 0.438718577015566 0.3028994 0 hPsi_site_16225 iPseU_CNN:0.3028994;iRNA_PseU:0 16226 chr1 155014317 155014317 1 + C A UCEC 155014316 + 155014296 155014336 41 GCCTATGAAGTTCAAGTTCTTCTGTGGCATTGCCAAGGGTC GCCTATGAAGTTCAAGTTCTTATGTGGCATTGCCAAGGGTC < 41bp 0.506853113572627 0.853972338659157 0.49388322 0.763697 prediction 0.69423845017306 Functional Gain - DCST1 ENSG00000163357 CDS Human protein_coding chr1:155014316 chr1:155014317 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_22502 0 0 0 0 0 nucleus 0.438718563289586 0.43870666374339 0.527394 0 hPsi_site_16226 iPseU_CNN:0.527394;iRNA_PseU:0 16227 chr2 74784055 74784055 1 + C A HNSC 74784054 + 74784034 74784074 41 CCCTCGGAGCACAAAGCCCCTCCTTGCTCCCAAGCCCCAGG CCCTCGGAGCACAAAGCCCCTACTTGCTCCCAAGCCCCAGG < 41bp 0.503775637567701 0.850894406880465 0.3343168 0.42315215 prediction 0.694237538625528 Functional Gain - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74784054 chr2:74784055 synonymous SNV . 0 22 hPsi_associated_SNPs_22503 0 0 0 0 0 Cytosol 0.438718548879184 0.438718592931509 0 0 hPsi_site_16227 iPseU_CNN:0;iRNA_PseU:0 16228 chr1 212798804 212798804 1 + G A ESCA 212798803 + 212798783 212798823 41 AGCTGAAGACATGATGTGGATGCCTGTGTTTCAGGAAGACA AGCTGAAGACATGATGTGGATACCTGTGTTTCAGGAAGACA < 41bp 0.51984949695319 0.866963480404534 0.24268574 0.5909103 prediction 0.694227966902689 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798803 chr1:212798804 nonsynonymous SNV 0.025 0 22 hPsi_associated_SNPs_22504 0 0 0 0 0 exosome 0.438689925082745 0.439041834484713 0.1818206 0 hPsi_site_16228 iPseU_CNN:0.1818206;iRNA_PseU:0 16229 chr17 7345947 7345947 1 + G A STAD 7345946 + 7345926 7345966 41 CTGAGTGTCGCTTTAAGGAGTGTGTCTTTGAGAATTACTAC CTGAGTGTCGCTTTAAGGAGTATGTCTTTGAGAATTACTAC < 41bp 0.542900548625314 0.890014431549547 0.20767218 0.22589824 prediction 0.694227765848464 Functional Gain - FGF11 ENSG00000161958 CDS Human protein_coding chr17:7345946 chr17:7345947 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_22505 0 0 1 0 1 exosome 0.438595780580565 0.438669261909694 0 0 hPsi_site_16229 iPseU_CNN:0;iRNA_PseU:0 16230 chr16 67686417 67686417 1 + C A UCEC 67686416 + 67686396 67686436 41 TGGCCTGAGCTCAGCCACGGTCTTCACCTGGTCCCCTTCAT TGGCCTGAGCTCAGCCACGGTATTCACCTGGTCCCCTTCAT < 41bp 0.502039927990187 0.849133700446286 0.31153008 0.67054063 prediction 0.694187544912197 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67686416 chr16:67686417 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_22506 0 0 0 0 2 chromatin 0.438718768221158 0.438714457765243 0.34108126 0 hPsi_site_16230 iPseU_CNN:0.34108126;iRNA_PseU:0 16231 chr17 5984041 5984041 1 + C A GBM 5984040 + 5984020 5984060 41 AACACAGTTCCTGCTGTTCTTCCTCACGGCTGCCTACCTGA AACACAGTTCCTGCTGTTCTTACTCACGGCTGCCTACCTGA < 41bp 0.497758297641219 0.847087828880229 0.25892034 0.39591047 prediction 0.694175657760459 Functional Gain - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:5984040 chr17:5984041 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_22507 0 0 1 0 0 exosome 0.438718590898727 0.438718483367978 0 0 hPsi_site_16231 iPseU_CNN:0;iRNA_PseU:0 16232 chr16 29819072 29819072 1 + G A BLCA 29819071 + 29819051 29819091 41 CTTCAAGCGCAAGGACCGCATGAGCTACCACGTGCGCTCAC CTTCAAGCGCAAGGACCGCATAAGCTACCACGTGCGCTCAC < 41bp 0.467890891916944 0.847087036547563 0.29464468 0.5728153 prediction 0.694174073095127 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819071 chr16:29819072 nonsynonymous SNV 0.974 3 22 hPsi_associated_SNPs_22508 0 0 1 0 1 Cytosol 0.43752214814285 0.43871848914916 0.1456306 0 hPsi_site_16232 iPseU_CNN:0.1456306;iRNA_PseU:0 16233 chr20 30371583 30371583 1 + G A LUSC 30371582 + 30371562 30371602 41 CTTGCCCAAGAAACCACCTGTGAAACCACCCACCGAGCCTA CTTGCCCAAGAAACCACCTGTAAAACCACCCACCGAGCCTA < 41bp 0.545689859483779 0.89277177586544 0.5118442 0.66504943 prediction 0.694163832763322 Functional Gain - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30371582 chr20:30371583 synonymous SNV . 0 22 hPsi_associated_SNPs_22509 0 0 1 0 1 Cytosol 0.438718592993411 0.438718592995102 0.30641046 0 hPsi_site_16233 iPseU_CNN:0.30641046;iRNA_PseU:0 16234 chrX 23953347 23953347 1 + C A LGG 23953346 + 23953326 23953366 41 TCGATGAGGCCCCTGCATTTTCTGGCGGCAGAAATAACAGC TCGATGAGGCCCCTGCATTTTATGGCGGCAGAAATAACAGC < 41bp 0.503678729593212 0.850755824193783 0.2458547 0.40160108 prediction 0.694154189201142 Functional Gain - CXorf58 ENSG00000165182 CDS Human protein_coding chrX:23953346 chrX:23953347 nonsynonymous SNV 0.437 0 22 hPsi_associated_SNPs_22510 0 0 0 0 1 chromatin 0.438717360483486 0.438732867337366 0 0 hPsi_site_16234 iPseU_CNN:0;iRNA_PseU:0 16235 chr15 74235276 74235276 1 + G A SKCM 74235275 + 74235255 74235295 41 CCCACCTGTACTCCCTGCGCTGTGCTGCGGAGGAGAAGTGT CCCACCTGTACTCCCTGCGCTATGCTGCGGAGGAGAAGTGT < 41bp 0.445570790271269 0.84706988458333 0.2842015 0.45390707 prediction 0.694139769166661 Functional Gain - LOXL1 ENSG00000129038 CDS Human protein_coding chr15:74235275 chr15:74235276 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_22511 0 0 0 0 2 exosome 0.438731205682579 0.438725325726766 0 0 hPsi_site_16235 iPseU_CNN:0;iRNA_PseU:0 16236 chr19 7965159 7965159 1 + G A UCEC 7965158 + 7965138 7965178 41 CCTCAAGAAGCTGGCGGCATTGCGGGAGCTGGAGCTGGTGG CCTCAAGAAGCTGGCGGCATTACGGGAGCTGGAGCTGGTGG < 41bp 0.533338867592838 0.880407325483159 0.22304183 0.28443462 prediction 0.694136915780642 Functional Gain - LRRC8E ENSG00000171017;ENSG00000214248 CDS Human other chr19:7965158 chr19:7965159 synonymous SNV . 0 22 hPsi_associated_SNPs_22512 0 0 0 0 0 chromatin 0.439118009393823 0.43869748026045 0 0 hPsi_site_16236 iPseU_CNN:0;iRNA_PseU:0 16237 chr1 150315909 150315909 1 + G A rs587594838 150315908 + 150315888 150315928 41 AAAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAG AAAAGTCAGGCTGGGCCTGATACCTCCTCCAGAACCCAAAG < 41bp 0.532985161538955 0.880048803920607 0.33757693 0.70584947 prediction 0.694127284763304 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150315908 chr1:150315909 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_22513 0 0 1 0 1 Nucleus 0.438630278478471 0.438226076840626 0.41169894 0 hPsi_site_16237 iPseU_CNN:0.41169894;iRNA_PseU:0 16238 chr17 78210856 78210856 1 + C A BLCA 78210855 + 78210835 78210875 41 CAGTCCGGATCCCGCCCTTCTCAGTGACCACAGCCAACGGG CAGTCCGGATCCCGCCCTTCTAAGTGACCACAGCCAACGGG < 41bp 0.518754345133827 0.865812478159092 0.33993298 0.714273 prediction 0.694116266050531 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78210855 chr17:78210856 stopgain 0.957 1 22 hPsi_associated_SNPs_22514 0 0 1 0 1 chromatin 0.438706773764898 0.438716539928371 0.428546 0 hPsi_site_16238 iPseU_CNN:0.428546;iRNA_PseU:0 16239 chr2 96040954 96040954 1 + G A LUAD 96040953 + 96040933 96040973 41 GGGAACGGGGCCATCCACTTTGAGGTAGGTCCTCGCGGATT GGGAACGGGGCCATCCACTTTAAGGTAGGTCCTCGCGGATT < 41bp 0.527213263963822 0.87426537139972 0.5403327 0.8006717 prediction 0.694104214871796 Functional Gain - KCNIP3 ENSG00000115041 CDS Human protein_coding chr2:96040953 chr2:96040954 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_22515 0 0 1 0 2 Cytosol 0.438718251252023 0.43870744197346 0.520678 0 hPsi_site_16239 iPseU_CNN:0.520678;iRNA_PseU:0 16240 chr5 149582191 149582191 1 + G A rs117381766 149582190 + 149582170 149582210 41 GCCATCACCAGCATCCTGGCTGGCTTTGCCATCTTCTCCGT GCCATCACCAGCATCCTGGCTAGCTTTGCCATCTTCTCCGT < 41bp 0.444602217750373 0.847037566150674 0.18282273 0.3798595 prediction 0.694075132301348 Functional Gain - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149582190 chr5:149582191 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22516 0 0 0 0 2 exosome 0.43871855429099 0.438674188721925 0 0 hPsi_site_16240 iPseU_CNN:0;iRNA_PseU:0 16241 chr19 4288325 4288325 1 + G A BLCA 4288324 + 4288304 4288344 41 AGCTACCTAGTGCGGCTCAGTGAGACCAACCCCCAGGACTG AGCTACCTAGTGCGGCTCAGTAAGACCAACCCCCAGGACTG < 41bp 0.451664612238227 0.847034735863788 0.24539885 0.4834737 prediction 0.694069471727576 Functional Gain - SHD ENSG00000105251 CDS Human protein_coding chr19:4288324 chr19:4288325 nonsynonymous SNV 0.969 3 22 hPsi_associated_SNPs_22517 0 0 0 0 2 exosome 0.438718587837624 0.43871858973281 0 0 hPsi_site_16241 iPseU_CNN:0;iRNA_PseU:0 16242 chr16 68835703 68835703 1 + C A UCEC 68835702 + 68835682 68835722 41 TCATAACCCACAGATCCATTTCTTGGTCTACGCCTGGGACT TCATAACCCACAGATCCATTTATTGGTCTACGCCTGGGACT < 41bp 0.493516663990863 0.847032668603969 0.23004693 0.5832651 prediction 0.694065337207938 Functional Gain - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68835702 chr16:68835703 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_22518 0 0 0 0 1 Nucleus 0.438713482284356 0.438749316569398 0.1665302 0 hPsi_site_16242 iPseU_CNN:0.1665302;iRNA_PseU:0 16243 chr14 95625233 95625233 1 + G A rs183154560 95625232 + 95625212 95625252 41 GAAGAGACGGGGTTTCACCATGTTGGCCATGATGGTCTCGA GAAGAGACGGGGTTTCACCATATTGGCCATGATGGTCTCGA < 41bp 0.479492374162159 0.84703263347795 0.22399563 0.30205703 prediction 0.6940652669559 Functional Gain - DICER1-AS1 ENSG00000235706 ncRNA_exonic Human antisense chr14:95625232 chr14:95625233 . . 0 22 hPsi_associated_SNPs_22519 0 0 1 0 1 unknown 0.438674859331665 0.439683612412045 0 0 hPsi_site_16243 iPseU_CNN:0;iRNA_PseU:0 16244 chr12 132589057 132589057 1 + G A COAD 132589056 + 132589036 132589076 41 GGACTTCGTGGATGCCAGCGTGCTGGTGAGGCAGATCAGCT GGACTTCGTGGATGCCAGCGTACTGGTGAGGCAGATCAGCT < 41bp 0.465593491649468 0.847032359774083 0.2618642 0.7004686 prediction 0.694064719548167 Functional Gain - EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589056 chr12:132589057 synonymous SNV . 0 22 hPsi_associated_SNPs_22520 0 0 1 0 0 chromatin 0.438729114741422 0.444074619406198 0.4009372 0 hPsi_site_16244 iPseU_CNN:0.4009372;iRNA_PseU:0 16245 chr19 49377076 49377076 1 + G A BLCA 49377075 + 49377055 49377095 41 GCCGTGGAGGAGGAGGACGATGAAGAAGCTGTAAAGAAAGA GCCGTGGAGGAGGAGGACGATAAAGAAGCTGTAAAGAAAGA < 41bp 0.457080988106516 0.847018921954516 0.3029121 0.37934083 prediction 0.694037843909033 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377075 chr19:49377076 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_22521 0 0 1 0 0 Cytosol 0.438731075471228 0.438718592834219 0 0 hPsi_site_16245 iPseU_CNN:0;iRNA_PseU:0 16246 chr22 31674314 31674314 1 + G A BLCA 31674313 + 31674293 31674333 41 TCGAAATTGGAGGACTCCTTTGAGGCCCTCTCCCTGTACCT TCGAAATTGGAGGACTCCTTTAAGGCCCTCTCCCTGTACCT < 41bp 0.540846384063705 0.887862384312201 0.3378137 0.6629261 prediction 0.694032000496993 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31674313 chr22:31674314 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22522 0 0 1 0 1 Cytosol 0.438718592852454 0.438718592998215 0.3258522 0 hPsi_site_16246 iPseU_CNN:0.3258522;iRNA_PseU:0 16247 chr17 38350209 38350209 1 + G A rs186575722 38350208 + 38350188 38350228 41 CATAAGTCTGTTCATCCTGCTGAAGTCCCCTCCCCATTGCT CATAAGTCTGTTCATCCTGCTAAAGTCCCCTCCCCATTGCT < 41bp 0.518709802779271 0.865724527932276 0.38214654 0.6222247 prediction 0.69402945030601 Functional Gain - RAPGEFL1 ENSG00000108352 UTR3 Human protein_coding chr17:38350208 chr17:38350209 . . 0 22 hPsi_associated_SNPs_22523 0 0 1 1 0 chromatin 0.438673044579916 0.438718555026548 0.2444494 0 hPsi_site_16247 iPseU_CNN:0.2444494;iRNA_PseU:0 16248 chr13 50594516 50594516 1 + G A CESC 50594515 + 50594495 50594535 41 TTTGAAAGGATAAAAAGCCCTGAAGTGCTCATCACGAATGA TTTGAAAGGATAAAAAGCCCTAAAGTGCTCATCACGAATGA < 41bp 0.482104860107258 0.847009924427728 0.15696451 0.28764063 prediction 0.694019848855455 Functional Gain - KCNRG ENSG00000198553 CDS Human protein_coding chr13:50594515 chr13:50594516 nonsynonymous SNV 0.134 0 22 hPsi_associated_SNPs_22524 0 0 0 0 0 nucleus 0.438718580819352 0.438788613490572 0 0 hPsi_site_16248 iPseU_CNN:0;iRNA_PseU:0 16249 chr6 41621072 41621072 1 + G A COAD 41621071 + 41621051 41621091 41 CCGCAGACTGCTGTGTCCACTGCATCCTGTCCTGCCTGTTC CCGCAGACTGCTGTGTCCACTACATCCTGTCCTGCCTGTTC < 41bp 0.455740307737651 0.847008947083794 0.34238422 0.37209693 prediction 0.694017894167589 Functional Gain - MDFI ENSG00000112559 CDS Human protein_coding chr6:41621071 chr6:41621072 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22525 0 0 0 0 1 Cytosol 0.438744040449835 0.438716857672425 0 0 hPsi_site_16249 iPseU_CNN:0;iRNA_PseU:0 16250 chr7 30640718 30640718 1 + G A GBM 30640717 + 30640697 30640737 41 TGGGCCAGTTGGCTGTGCTTTGAAGAACAATATTATTCAGA TGGGCCAGTTGGCTGTGCTTTAAAGAACAATATTATTCAGA < 41bp 0.543202306370074 0.890210528966332 0.28050005 0.5870387 prediction 0.694016445192515 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30640717 chr7:30640718 synonymous SNV . 0 22 hPsi_associated_SNPs_22526 0 0 1 0 2 Cytosol 0.438718979230093 0.438356152882177 0.1740774 0 hPsi_site_16250 iPseU_CNN:0.1740774;iRNA_PseU:0 16251 chrX 100808309 100808309 1 + C A UCEC 100808308 + 100808288 100808328 41 AGGGGCTAGGGTGGGTACCATCTCTGGGAACAGGACCCTTG AGGGGCTAGGGTGGGTACCATATCTGGGAACAGGACCCTTG < 41bp 0.493334716246164 0.847004232558042 0.62930053 0.621162 prediction 0.694008465116085 Functional Gain - ARMCX1 ENSG00000126947 CDS Human protein_coding chrX:100808308 chrX:100808309 synonymous SNV . 0 22 hPsi_associated_SNPs_22527 0 0 0 0 0 exosome 0.438760823138738 0.43871974458976 0 0 hPsi_site_16251 iPseU_CNN:0;iRNA_PseU:0 16252 chr14 74042181 74042181 1 + G A rs376614956 74042180 + 74042160 74042200 41 GACTTTCTTCCACAAACACTTGGGTGGCCACGAGGGGACAA GACTTTCTTCCACAAACACTTAGGTGGCCACGAGGGGACAA < 41bp 0.46360342149662 0.847001624476511 0.23950723 0.4426735 prediction 0.694003248953021 Functional Gain - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74042180 chr14:74042181 synonymous SNV . 0 22 hPsi_associated_SNPs_22528 0 0 0 0 0 exosome 0.438718592995105 0.4387185946089 0 0 hPsi_site_16252 iPseU_CNN:0;iRNA_PseU:0 16253 chr4 124322809 124322809 1 + G A SARC 124322808 + 124322788 124322828 41 TGTGATCCAGCAGCCTTCTTTGGATAGCCGTCAGAGATTAG TGTGATCCAGCAGCCTTCTTTAGATAGCCGTCAGAGATTAG < 41bp 0.534453205955726 0.881454394090763 0.27559328 0.60643244 prediction 0.694002376270074 Functional Gain - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124322808 chr4:124322809 synonymous SNV . 0 22 hPsi_associated_SNPs_22529 0 0 0 0 0 nucleus 0.438748295155385 0.438718984666781 0.21286488 0 hPsi_site_16253 iPseU_CNN:0.21286488;iRNA_PseU:0 16254 chr9 140173894 140173894 1 + G A rs118073815 140173893 + 140173873 140173913 41 GCGGCGCGTGGCCGACGTGGTGGCGCGGGCCGAAGCGGAGG GCGGCGCGTGGCCGACGTGGTAGCGCGGGCCGAAGCGGAGG < 41bp 0.466569488968164 0.84699950047085 0.25780636 0.7810322 prediction 0.693999000941699 Functional Gain - TOR4A ENSG00000198113 CDS Human protein_coding chr9:140173893 chr9:140173894 synonymous SNV . 0 22 hPsi_associated_SNPs_22530 0 0 0 0 0 Ribosome 0.438900909354386 0.438718567153824 0.5620644 0 hPsi_site_16254 iPseU_CNN:0.5620644;iRNA_PseU:0 16255 chr1 206628299 206628299 1 + G A BLCA 206628298 + 206628278 206628318 41 TGAGCCACCTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCA TGAGCCACCTGAAGAAAAGGTAACAGCCAGAGCGGGGGCCA < 41bp 0.456622160500371 0.846999207509144 0.21846005 0.6386901 prediction 0.693998415018287 Functional Gain - SRGAP2 ENSG00000163486 CDS Human other chr1:206628298 chr1:206628299 synonymous SNV . 0 22 hPsi_associated_SNPs_22531 0 0 1 0 2 chromatin 0.4387185929951 0.438718565818868 0.2773802 0 hPsi_site_16255 iPseU_CNN:0.2773802;iRNA_PseU:0 16256 chr18 641413 641413 1 + C A UCEC 641412 + 641392 641432 41 AATCAGCAGTATGGCCAGATTCTCCAGATGACCCGGAAGCA AATCAGCAGTATGGCCAGATTATCCAGATGACCCGGAAGCA < 41bp 0.50205109602036 0.849034229306887 0.19360003 0.31203836 prediction 0.693966266573055 Functional Gain - CLUL1 ENSG00000079101 CDS Human protein_coding chr18:641412 chr18:641413 nonsynonymous SNV 0.574 1 22 hPsi_associated_SNPs_22532 0 0 0 0 1 cytosol 0.438718596523521 0.438718186857998 0 0 hPsi_site_16256 iPseU_CNN:0;iRNA_PseU:0 16257 chr8 24775171 24775171 1 + G A BLCA 24775170 + 24775150 24775190 41 AGTGGCTACCAAGGAGGAGCTGGTGGCAGATGCCAAGGTGG AGTGGCTACCAAGGAGGAGCTAGTGGCAGATGCCAAGGTGG < 41bp 0.451598271708506 0.84698050361012 0.120085746 0.3010518 prediction 0.69396100722024 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24775170 chr8:24775171 synonymous SNV . 0 22 hPsi_associated_SNPs_22533 0 0 0 0 0 exosome 0.438718593046728 0.438718603946444 0 0 hPsi_site_16257 iPseU_CNN:0;iRNA_PseU:0 16258 chr17 7483613 7483613 1 + C A KIRC 7483612 + 7483592 7483632 41 CTCCAAGCCCAGATTCAGATTCGAGTCATGTACACAACCCA CTCCAAGCCCAGATTCAGATTAGAGTCATGTACACAACCCA < 41bp 0.502207878464497 0.849187690299774 0.28683215 0.30677235 prediction 0.693959623670555 Functional Gain - CD68 ENSG00000129226 CDS Human protein_coding chr17:7483612 chr17:7483613 synonymous SNV . 0 22 hPsi_associated_SNPs_22534 0 0 1 0 1 Endoplasmic reticulum 0.438718574964127 0.438718592997412 0 0 hPsi_site_16258 iPseU_CNN:0;iRNA_PseU:0 16259 chr2 190535309 190535309 1 + G A LUSC 190535308 + 190535288 190535328 41 GAACTTGGTCTTACAGCCTCTGCTCTTCTGCCCAAACGGGC GAACTTGGTCTTACAGCCTCTACTCTTCTGCCCAAACGGGC < 41bp 0.536646256122339 0.883615239312204 0.23144001 0.37417084 prediction 0.693937966379732 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190535308 chr2:190535309 nonsynonymous SNV 0.871 2 22 hPsi_associated_SNPs_22535 0 0 1 0 0 chromatin 0.438718833931351 0.43871685024965 0 0 hPsi_site_16259 iPseU_CNN:0;iRNA_PseU:0 16260 chr11 4903564 4903564 1 + G A LUSC 4903563 + 4903543 4903583 41 CACAGACAGGATGGTCCTGGTGATAGGGCTGGTCATCTGCA CACAGACAGGATGGTCCTGGTAATAGGGCTGGTCATCTGCA < 41bp 0.478211198529821 0.84696628154086 0.16971096 0.28642416 prediction 0.69393256308172 Functional Gain - OR51T1 ENSG00000176900 CDS Human protein_coding chr11:4903563 chr11:4903564 synonymous SNV . 0 22 hPsi_associated_SNPs_22536 0 0 0 0 0 unknown 0.438718576395675 0.438718587950738 0 0 hPsi_site_16260 iPseU_CNN:0;iRNA_PseU:0 16261 chr11 61015925 61015925 1 + G A HNSC 61015924 + 61015904 61015944 41 GGCAGCGTGGTGATCTTTGGTGGCATTGACTCTTCTTACTA GGCAGCGTGGTGATCTTTGGTAGCATTGACTCTTCTTACTA < 41bp 0.447525060298403 0.846965658514253 0.13541487 0.20483106 prediction 0.693931317028507 Functional Gain - PGA5 ENSG00000229183;ENSG00000256713 CDS Human other chr11:61015924 chr11:61015925 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_22537 0 0 0 0 2 exosome 0.438718389063381 0.438718592960189 0 0 hPsi_site_16261 iPseU_CNN:0;iRNA_PseU:0 16262 chr19 35175213 35175213 1 + G A ESCA 35175212 + 35175192 35175232 41 ACAAAGAAGGATATTTATGATGAAGATTCACCCCAACCAGT ACAAAGAAGGATATTTATGATAAAGATTCACCCCAACCAGT < 41bp 0.524669067233655 0.871630957459261 0.36929676 0.70299387 prediction 0.693923780451211 Functional Gain - ZNF302 ENSG00000089335 CDS Human protein_coding chr19:35175212 chr19:35175213 nonsynonymous SNV 0.729 2 22 hPsi_associated_SNPs_22538 0 0 1 0 1 exosome 0.439884857634089 0.438716847367546 0.40598774 0 hPsi_site_16262 iPseU_CNN:0.40598774;iRNA_PseU:0 16263 chr14 20216063 20216063 1 + G A LUAD 20216062 + 20216042 20216082 41 GGGTTTTATCCACTCTATCATGCAGGTCATACTAGTCATCC GGGTTTTATCCACTCTATCATACAGGTCATACTAGTCATCC < 41bp 0.473148984883992 0.846949340133031 0.108709574 0.1899063 prediction 0.693898680266062 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216062 chr14:20216063 nonsynonymous SNV 0.944 0 22 hPsi_associated_SNPs_22539 0 0 0 0 0 unknown 0.438720187933691 0.438716626729849 0 0 hPsi_site_16263 iPseU_CNN:0;iRNA_PseU:0 16264 chr1 35226969 35226969 1 + G A PRAD 35226968 + 35226948 35226988 41 TCGTGTGCTGGTGTACGTGGTGGCAGCGGAGGAGGTGTGGG TCGTGTGCTGGTGTACGTGGTAGCAGCGGAGGAGGTGTGGG < 41bp 0.544696174705105 0.891619514539631 0.19855487 0.31697863 prediction 0.693846679669052 Functional Gain - GJB4 ENSG00000189433 CDS Human protein_coding chr1:35226968 chr1:35226969 synonymous SNV . 0 22 hPsi_associated_SNPs_22540 0 0 0 0 0 exosome 0.438613026628506 0.439116977161506 0 0 hPsi_site_16264 iPseU_CNN:0;iRNA_PseU:0 16265 chr6 398912 398912 1 + C A UCEC 398911 + 398891 398931 41 CCACAGAGCCAAGCATAAGGTCTGCCGAAGCCTTGGCGTTC CCACAGAGCCAAGCATAAGGTATGCCGAAGCCTTGGCGTTC < 41bp 0.508190757985901 0.855113285858601 0.3477777 0.7869079 prediction 0.6938450557454 Functional Gain - IRF4 ENSG00000137265 CDS Human protein_coding chr6:398911 chr6:398912 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22541 0 0 0 0 2 exosome 0.438724304145255 0.43871862737456 0.5738158 0 hPsi_site_16265 iPseU_CNN:0.5738158;iRNA_PseU:0 16266 chr2 198571078 198571078 1 + G A UCEC 198571077 + 198571057 198571097 41 AAGGACATTCTCAAATTCCATGCCATCTATTGGCCTGCCTT AAGGACATTCTCAAATTCCATACCATCTATTGGCCTGCCTT < 41bp 0.469857793644128 0.846921871652885 0.21036285 0.25170857 prediction 0.69384374330577 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571077 chr2:198571078 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22542 0 0 1 0 0 Ribosome 0.437374823032854 0.438718593198487 0 0 hPsi_site_16266 iPseU_CNN:0;iRNA_PseU:0 16267 chr21 38865413 38865413 1 + G A COAD 38865412 + 38865392 38865432 41 TTGATATGTGGTCCCTCGGGTGTATTTTGGTTGAAATGCAC TTGATATGTGGTCCCTCGGGTATATTTTGGTTGAAATGCAC < 41bp 0.457644404503483 0.846909812232669 0.35506162 0.3919024 prediction 0.693819624465337 Functional Gain - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38865412 chr21:38865413 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22543 0 0 1 0 2 Cytosol 0.438720126904775 0.438727563925188 0 0 hPsi_site_16267 iPseU_CNN:0;iRNA_PseU:0 16268 chr14 70233633 70233633 1 + C T rs376302000 70233634 - 70233614 70233654 41 CTCGTTTGGGCTCGGCCGGCTGGTGCCGGAGTCTGGAGGGA CTCGTTTGGGCTCGGCCGGCTAGTGCCGGAGTCTGGAGGGA < 41bp 0.477833496467815 0.846904587725906 0.19169456 0.2704972 prediction 0.693809175451812 Functional Gain - LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70233634 chr14:70233633 . . 0 22 hPsi_associated_SNPs_22544 0 0 0 0 0 unknown 0.438718588084949 0.438718613524215 0 0 hPsi_site_16268 iPseU_CNN:0;iRNA_PseU:0 16269 chr11 123886639 123886639 1 + G A SKCM 123886638 + 123886618 123886658 41 CTCTACACAGTCATGTCCTATGATCGCTACTTGGCCATCAG CTCTACACAGTCATGTCCTATAATCGCTACTTGGCCATCAG < 41bp 0.523431200429745 0.870331201118051 0.2747468 0.44425786 prediction 0.693800001376612 Functional Gain - OR10G4 ENSG00000254737 CDS Human protein_coding chr11:123886638 chr11:123886639 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22545 0 0 0 0 0 unknown 0.438708420215601 0.438726051699702 0 0 hPsi_site_16269 iPseU_CNN:0;iRNA_PseU:0 16270 chr19 1037663 1037663 1 + G A BLCA 1037662 + 1037642 1037682 41 GGGACCCGGCGGCACATCTATGATACCAAGCTGGGAACCGA GGGACCCGGCGGCACATCTATAATACCAAGCTGGGAACCGA < 41bp 0.540897119831054 0.887793067084077 0.28543347 0.40581918 prediction 0.693791894506045 Functional Gain - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037662 chr19:1037663 nonsynonymous SNV 0.965 0 22 hPsi_associated_SNPs_22546 0 0 1 0 1 Ribosome 0.438718593319978 0.438718592995102 0 0 hPsi_site_16270 iPseU_CNN:0;iRNA_PseU:0 16271 chr22 50925882 50925882 1 + C A STAD 50925881 + 50925861 50925901 41 GGCCAAAGACAAGGCCAGCTTCCGGAACTACACGGTGAGTA GGCCAAAGACAAGGCCAGCTTACGGAACTACACGGTGAGTA < 41bp 0.503123079342313 0.850014271311608 0.2961388 0.37162808 prediction 0.693782383938589 Functional Gain - MIOX ENSG00000100253 CDS Human protein_coding chr22:50925881 chr22:50925882 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_22547 0 0 0 0 2 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_16271 iPseU_CNN:0;iRNA_PseU:0 16272 chr11 68201220 68201220 1 + G A SKCM 68201219 + 68201199 68201239 41 GCTCCGCCGCCCAGTTCCCCTGCGCGCGGGGTCAGTGTGTG GCTCCGCCGCCCAGTTCCCCTACGCGCGGGGTCAGTGTGTG < 41bp 0.455923374467661 0.846884479842258 0.20128101 0.56095684 prediction 0.693768959684516 Functional Gain - LRP5 ENSG00000162337 CDS Human protein_coding chr11:68201219 chr11:68201220 nonsynonymous SNV 0.977 4 22 hPsi_associated_SNPs_22548 0 0 1 0 1 Endoplasmic reticulum 0.438701772174847 0.438314734153762 0.12191368 0 hPsi_site_16272 iPseU_CNN:0.12191368;iRNA_PseU:0 16273 chr11 5510270 5510270 1 + G A SKCM 5510269 + 5510249 5510289 41 TTTTGTGTCCATTCTATCTATGCTCTGGAGTCCTCAATTCT TTTTGTGTCCATTCTATCTATACTCTGGAGTCCTCAATTCT < 41bp 0.520816348903006 0.867700015103618 0.2793753 0.5006232 prediction 0.693767332401225 Functional Gain - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510269 chr11:5510270 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_22549 0 0 0 0 0 chromatin 0.438487169707935 0.438649318537004 0.00124640000000009 0 hPsi_site_16273 iPseU_CNN:0.00124640000000009;iRNA_PseU:0 16274 chr19 49469846 49469846 1 + G A BRCA 49469845 + 49469825 49469865 41 CCTCTTCTCTCTCAGCTCTGTGACTTCCTGGAGACTCACTT CCTCTTCTCTCTCAGCTCTGTAACTTCCTGGAGACTCACTT < 41bp 0.507448525705503 0.854331219580144 0.2714205 0.42910233 prediction 0.693765387749281 Functional Gain - FTL ENSG00000087086 CDS Human protein_coding chr19:49469845 chr19:49469846 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22550 0 0 1 1 1 Cytosol 0.43872331418692 0.438718391819118 0 0 hPsi_site_16274 iPseU_CNN:0;iRNA_PseU:0 16275 chr5 176085391 176085391 1 + G A rs1063266 176085390 + 176085370 176085410 41 CAGCTATGTGAAGGGGTGTGTGTGGAGTGATCCTGCCGCCC CAGCTATGTGAAGGGGTGTGTATGGAGTGATCCTGCCGCCC < 41bp 0.503635105390599 0.850511172376879 0.30948287 0.43842584 prediction 0.69375213397256 Functional Gain - TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085390 chr5:176085391 . . 0 22 hPsi_associated_SNPs_22551 0 0 1 0 0 Endoplasmic reticulum 0.438715697427288 0.438718532080518 0 0 hPsi_site_16275 iPseU_CNN:0;iRNA_PseU:0 16276 chr5 172513540 172513540 1 + G A UCEC 172513539 + 172513519 172513559 41 ATGGATCCGCCTTTCGGGGATGCCTTTCGAAGCCACACCTT ATGGATCCGCCTTTCGGGGATACCTTTCGAAGCCACACCTT < 41bp 0.454567158710473 0.846872875664728 0.5347594 0.7790586 prediction 0.693745751329457 Functional Gain - CREBRF ENSG00000164463 CDS Human protein_coding chr5:172513539 chr5:172513540 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22552 0 0 1 0 2 Cytosol 0.43871859291296 0.438718588801595 0.4885984 0 hPsi_site_16276 iPseU_CNN:0.4885984;iRNA_PseU:0 16277 chr6 36454751 36454751 1 + G A UCEC 36454750 + 36454730 36454770 41 ACAACGCCCCTTCATCCAGATGTCATGGGAAAAGGAAGAAG ACAACGCCCCTTCATCCAGATATCATGGGAAAAGGAAGAAG < 41bp 0.474153835184625 0.846868927135389 0.1652526 0.21873689 prediction 0.693737854270778 Functional Gain - KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36454750 chr6:36454751 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22553 0 0 1 0 1 Cytosol 0.438718569000897 0.438718531341833 0 0 hPsi_site_16277 iPseU_CNN:0;iRNA_PseU:0 16278 chr16 56996959 56996959 1 + C A SARC 56996958 + 56996938 56996978 41 CAAGGTGATCCAGACCGCCTTCCAGCGAGCCAGCTACCCAG CAAGGTGATCCAGACCGCCTTACAGCGAGCCAGCTACCCAG < 41bp 0.510719792210015 0.857588691982528 0.50743306 0.6933185 prediction 0.693737799545025 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:56996958 chr16:56996959 nonsynonymous SNV 0.315 2 22 hPsi_associated_SNPs_22554 0 0 0 0 2 exosome 0.438718592995303 0.438718600346215 0.37177088 0 hPsi_site_16278 iPseU_CNN:0.37177088;iRNA_PseU:0 16279 chr14 65041213 65041213 1 + G A BRCA 65041212 + 65041192 65041232 41 GAAATGGAATTGGTTTTAAGTGAATTAGAAGCAGCACAGAG GAAATGGAATTGGTTTTAAGTAAATTAGAAGCAGCACAGAG < 41bp 0.476678494201697 0.846868679805971 0.24876827 0.33625555 prediction 0.693737359611941 Functional Gain - PPP1R36 ENSG00000165807 CDS Human protein_coding chr14:65041212 chr14:65041213 nonsynonymous SNV 0.718 0 22 hPsi_associated_SNPs_22555 0 0 0 0 2 exosome 0.438766078867715 0.43477079603824 0 0 hPsi_site_16279 iPseU_CNN:0;iRNA_PseU:0 16280 chr15 68118509 68118509 1 + G A BLCA 68118508 + 68118488 68118528 41 CTCAAGAACTACAGCTATAATGAGATCCACAACCGCCGCGT CTCAAGAACTACAGCTATAATAAGATCCACAACCGCCGCGT < 41bp 0.539865597466602 0.886728777085111 0.24420542 0.27251893 prediction 0.693726359237018 Functional Gain - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68118508 chr15:68118509 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22556 0 0 0 0 0 exosome 0.438698521706238 0.43911102482279 0 0 hPsi_site_16280 iPseU_CNN:0;iRNA_PseU:0 16281 chrX 48417689 48417689 1 + G A COAD 48417688 + 48417668 48417708 41 GCTCTCCCGACCCGAGGAGTTGCGCCTGCGGATCTATCATG GCTCTCCCGACCCGAGGAGTTACGCCTGCGGATCTATCATG < 41bp 0.445441999958034 0.846860499297871 0.44689283 0.81205153 prediction 0.693720998595742 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48417688 chrX:48417689 synonymous SNV . 0 22 hPsi_associated_SNPs_22557 0 0 0 0 1 nucleolus 0.438688198700269 0.438109400192869 0.62410306 0 hPsi_site_16281 iPseU_CNN:0.62410306;iRNA_PseU:0 16282 chr13 51826163 51826163 1 + C A COAD 51826162 + 51826142 51826182 41 CCTGGATGTGGACATCCAGTTCTCCCTGAAAAGACTGCCCT CCTGGATGTGGACATCCAGTTATCCCTGAAAAGACTGCCCT < 41bp 0.509246728618538 0.856100261812524 0.34668177 0.70367074 prediction 0.693707066387973 Functional Gain - FAM124A ENSG00000150510 CDS Human protein_coding chr13:51826162 chr13:51826163 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22558 0 0 0 0 0 exosome 0.438715604535905 0.438720490237954 0.40734148 0 hPsi_site_16282 iPseU_CNN:0.40734148;iRNA_PseU:0 16283 chr14 102028316 102028316 1 + G A SKCM 102028315 + 102028295 102028335 41 CGCGCAAGGGAACCGCCCGCTGGTTCTCAATTTCGGCAGCT CGCGCAAGGGAACCGCCCGCTAGTTCTCAATTTCGGCAGCT < 41bp 0.535539694287486 0.882384350908863 0.21647352 0.6661123 prediction 0.693689313242754 Functional Gain - DIO3 ENSG00000197406 CDS Human protein_coding chr14:102028315 chr14:102028316 unknown . 0 22 hPsi_associated_SNPs_22559 0 0 0 0 0 Endoplasmic reticulum 0.438718555174345 0.438720980961167 0.3322246 0 hPsi_site_16283 iPseU_CNN:0.3322246;iRNA_PseU:0 16284 chr11 7083621 7083621 1 + G A SKCM 7083620 + 7083600 7083640 41 GGATCTGGCTTCTGTTATTTTGAATAACCCAAACCTGAGGA GGATCTGGCTTCTGTTATTTTAAATAACCCAAACCTGAGGA < 41bp 0.462219050171105 0.846843582619934 0.26885703 0.3851546 prediction 0.693687165239868 Functional Gain - NLRP14 ENSG00000158077 CDS Human protein_coding chr11:7083620 chr11:7083621 synonymous SNV . 0 22 hPsi_associated_SNPs_22560 0 0 0 0 1 cytosol 0.438718593174339 0.438718592995109 0 0 hPsi_site_16284 iPseU_CNN:0;iRNA_PseU:0 16285 chr15 22742731 22742731 1 + G A UCEC 22742730 + 22742710 22742750 41 GCGGAGGCTGGAGGAGATGATGTGGGAGAAGGAGGAGAAGA GCGGAGGCTGGAGGAGATGATATGGGAGAAGGAGGAGAAGA < 41bp 0.455852547261944 0.846841214888787 0.2841425 0.32293743 prediction 0.693682429777575 Functional Gain - GOLGA6L1;GOLGA6L22 ENSG00000197414 CDS Human other chr15:22742730 chr15:22742731 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22561 0 0 0 0 0 unknown 0.438718593386845 0.438718593016707 0 0 hPsi_site_16285 iPseU_CNN:0;iRNA_PseU:0 16286 chr12 125587285 125587285 1 + G A rs141283616 125587284 + 125587264 125587304 41 ATCTTCTCTGTGGAGGCTGTTGTCTATAATGGCAAAGAGCA ATCTTCTCTGTGGAGGCTGTTATCTATAATGGCAAAGAGCA < 41bp 0.54684978088645 0.89368522207609 0.3897024 0.6613836 prediction 0.693670882379279 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125587284 chr12:125587285 nonsynonymous SNV 0.193 0 22 hPsi_associated_SNPs_22562 0 0 1 0 1 Ribosome 0.438718396534921 0.438718552653584 0.3227672 0 hPsi_site_16286 iPseU_CNN:0.3227672;iRNA_PseU:0 16287 chr17 53342935 53342935 1 + G A BRCA 53342934 + 53342914 53342954 41 GTCCCTGCTGGAGAACCCGCTGAAGCTCCCCCTTCACCACG GTCCCTGCTGGAGAACCCGCTAAAGCTCCCCCTTCACCACG < 41bp 0.468629740366758 0.846828669147861 0.3311137 0.42178512 prediction 0.693657338295722 Functional Gain - HLF ENSG00000108924 CDS Human protein_coding chr17:53342934 chr17:53342935 synonymous SNV . 0 22 hPsi_associated_SNPs_22563 0 0 1 0 1 cytosol 0.438698418212129 0.438718613449641 0 0 hPsi_site_16287 iPseU_CNN:0;iRNA_PseU:0 16288 chr17 46973071 46973071 1 + G A rs13905 46973070 + 46973050 46973090 41 TGCCATTCTTGGCTTTGCCCTGTCTGAGGCCATGGGGCTTT TGCCATTCTTGGCTTTGCCCTATCTGAGGCCATGGGGCTTT < 41bp 0.537947336039828 0.88476038775787 0.21366131 0.4534911 prediction 0.693626103436085 Functional Gain - ATP5G1 ENSG00000159199 CDS Human protein_coding chr17:46973070 chr17:46973071 synonymous SNV . 0 22 hPsi_associated_SNPs_22564 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_16288 iPseU_CNN:0;iRNA_PseU:0 16289 chr17 40705888 40705888 1 + G A rs201791531 40705887 + 40705867 40705907 41 CGAGAGTCTGGCGGTTCTGCTGCTGCCCTTTGGGGTCCAGT CGAGAGTCTGGCGGTTCTGCTACTGCCCTTTGGGGTCCAGT < 41bp 0.540237827573651 0.887048888946239 0.32318982 0.5667541 prediction 0.693622122745175 Functional Gain - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705887 chr17:40705888 synonymous SNV . 0 22 hPsi_associated_SNPs_22565 0 0 0 0 2 chromatin 0.438718589038682 0.438718546387705 0.1335082 0 hPsi_site_16289 iPseU_CNN:0.1335082;iRNA_PseU:0 16290 chrX 56591119 56591119 1 + G A LUSC 56591118 + 56591098 56591138 41 CTATAATGCTTTACGGCGCATGTACACTGACATTCAAGAGC CTATAATGCTTTACGGCGCATATACACTGACATTCAAGAGC < 41bp 0.470877561555414 0.846808632203939 0.22256762 0.3112942 prediction 0.693617264407879 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591118 chrX:56591119 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22566 0 0 1 0 0 nucleus 0.436929114189502 0.437543440130584 0 0 hPsi_site_16290 iPseU_CNN:0;iRNA_PseU:0 16291 chr3 50005348 50005348 1 + G A BLCA 50005347 + 50005327 50005367 41 GACAGGGATGCTCACGCTGTTGACTTCAGAGGTAGGGATGC GACAGGGATGCTCACGCTGTTAACTTCAGAGGTAGGGATGC < 41bp 0.458729012135751 0.846801480810644 0.30113333 0.60439557 prediction 0.693602961621288 Functional Gain - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005347 chr3:50005348 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22567 0 0 1 3 0 Nucleus 0.438725416169116 0.441991372261682 0.20879114 0 hPsi_site_16291 iPseU_CNN:0.20879114;iRNA_PseU:0 16292 chr12 121000814 121000814 1 + C A KICH 121000813 + 121000793 121000833 41 GTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGAT GTCACTGGTGTTGTGGCTGCTATGGAACAACTGGTGCTGAT < 41bp 0.51538932514624 0.862189538081856 0.33413655 0.65802395 prediction 0.693600425871231 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121000813 chr12:121000814 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_22568 0 0 1 0 2 Ribosome 0.438744956451776 0.43877472222262 0.3160479 0 hPsi_site_16292 iPseU_CNN:0.3160479;iRNA_PseU:0 16293 chr5 157158487 157158487 1 + G A SKCM 157158486 + 157158466 157158506 41 AGTTAAGGTTCACGATTCCTTGGCCACCATTTCCATCACTC AGTTAAGGTTCACGATTCCTTAGCCACCATTTCCATCACTC < 41bp 0.530256590812386 0.877054326362945 0.1538186 0.24075863 prediction 0.69359547110112 Functional Gain - THG1L ENSG00000113272 CDS Human protein_coding chr5:157158486 chr5:157158487 synonymous SNV . 0 22 hPsi_associated_SNPs_22569 0 0 1 0 0 Nucleus 0.438718652658678 0.438719263600466 0 0 hPsi_site_16293 iPseU_CNN:0;iRNA_PseU:0 16294 chr15 45559673 45559673 1 + C A KIRC 45559672 + 45559652 45559692 41 GACAGAGGCACCTCTGCTCATCCGTCCCTACCTTGGGGACA GACAGAGGCACCTCTGCTCATACGTCCCTACCTTGGGGACA < 41bp 0.489094483652713 0.846795895692311 0.30281347 0.46128917 prediction 0.693591791384622 Functional Gain - SLC28A2 ENSG00000137860 CDS Human protein_coding chr15:45559672 chr15:45559673 synonymous SNV . 0 22 hPsi_associated_SNPs_22570 0 0 0 0 1 Nucleus 0.439724714711981 0.43872186464238 0 0 hPsi_site_16294 iPseU_CNN:0;iRNA_PseU:0 16295 chr12 55846843 55846843 1 + G A OV 55846842 + 55846822 55846862 41 TACTACTTCTGTCGCACCCTTGTTGAACCCCTTCATTTACA TACTACTTCTGTCGCACCCTTATTGAACCCCTTCATTTACA < 41bp 0.51589688579068 0.862690893595655 0.2814005 0.39685708 prediction 0.693588015609948 Functional Gain - OR6C2 ENSG00000179695 CDS Human protein_coding chr12:55846842 chr12:55846843 synonymous SNV . 0 22 hPsi_associated_SNPs_22571 0 0 0 0 0 unknown 0.438717525005271 0.438718595199691 0 0 hPsi_site_16295 iPseU_CNN:0;iRNA_PseU:0 16296 chr7 50444305 50444305 1 + G A LUAD 50444304 + 50444284 50444324 41 GAAATGAATGGGGAAGAATGTGCGGAGGATTTACGAATGCT GAAATGAATGGGGAAGAATGTACGGAGGATTTACGAATGCT < 41bp 0.499791725382407 0.846789916383167 0.37808353 0.6751516 prediction 0.693579832766334 Functional Gain - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50444304 chr7:50444305 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22572 0 0 1 0 1 Cytosol 0.438704457884383 0.438718535905569 0.3503032 0 hPsi_site_16296 iPseU_CNN:0.3503032;iRNA_PseU:0 16297 chr1 155295386 155295386 1 + G A MESO 155295385 + 155295365 155295405 41 CACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTC CACCCGCTCCCTTGGAACCCTATATAGCCAGGTCAGCCGTC < 41bp 0.537927007274677 0.884710787135472 0.18582457 0.4630556 prediction 0.69356755972159 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155295385 chr1:155295386 synonymous SNV . 0 22 hPsi_associated_SNPs_22573 0 0 1 0 2 Cytosol 0.438859079942292 0.438758533378124 0 0 hPsi_site_16297 iPseU_CNN:0;iRNA_PseU:0 16298 chr19 57642098 57642098 1 + G A rs3764574 57642097 + 57642077 57642117 41 CGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTC CGAGGTTCATCTTCAAGAGGTACCTCAACATCCAGAACTTC < 41bp 0.474227512827478 0.846782944726283 0.29587096 0.8048539 prediction 0.693565889452566 Functional Gain - USP29 ENSG00000131864 CDS Human protein_coding chr19:57642097 chr19:57642098 synonymous SNV . 0 22 hPsi_associated_SNPs_22574 0 0 0 0 0 unknown 0.438718538641962 0.438718575793447 0.6097078 0 hPsi_site_16298 iPseU_CNN:0.6097078;iRNA_PseU:0 16299 chr11 6411927 6411927 1 + G A rs142178073 6411926 + 6411906 6411946 41 AGCCCCCGGACTCCTTTGGATGGGCCTGGTGCTGGCGCTGG AGCCCCCGGACTCCTTTGGATAGGCCTGGTGCTGGCGCTGG < 41bp 0.478546571099689 0.846780405054722 0.27801076 0.8302166 prediction 0.693560810109445 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6411926 chr11:6411927 nonsynonymous SNV 0.159 0 22 hPsi_associated_SNPs_22575 1 0 1 0 0 Endoplasmic reticulum 0.438718592836574 0.438718592995102 0.6604332 0 hPsi_site_16299 iPseU_CNN:0.6604332;iRNA_PseU:0 16300 chr1 55066985 55066985 1 + G A BLCA 55066984 + 55066964 55067004 41 GAGGCCTATCGCCAGGAGGCTGAGACCCACCGGCGCCACAT GAGGCCTATCGCCAGGAGGCTAAGACCCACCGGCGCCACAT < 41bp 0.550540622290569 0.897320818684796 0.28377795 0.64190507 prediction 0.693560392788452 Functional Gain - ACOT11 ENSG00000162390 CDS Human protein_coding chr1:55066984 chr1:55066985 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_22576 0 0 0 0 1 chromatin 0.438718520989903 0.438718592995083 0.28381014 0 hPsi_site_16300 iPseU_CNN:0.28381014;iRNA_PseU:0 16301 chr9 125140256 125140256 1 + G A COAD 125140255 + 125140235 125140275 41 TTGACCGCTACCAGTGTGACTGCACCCGCACGGGCTATTCC TTGACCGCTACCAGTGTGACTACACCCGCACGGGCTATTCC < 41bp 0.439512118642139 0.846773044344092 0.32986027 0.91117764 prediction 0.693546088688184 Functional Gain - PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125140255 chr9:125140256 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_22577 0 0 0 0 3 nucleolus 0.438718593639135 0.438718592999471 0.82235528 0 hPsi_site_16301 iPseU_CNN:0.82235528;iRNA_PseU:0 16302 chrX 106845791 106845791 1 + G A LUAD 106845790 + 106845770 106845810 41 CGCAAGTGTGACATGGCAGATGATGCCAGTGATGGCAAGGA CGCAAGTGTGACATGGCAGATAATGCCAGTGATGGCAAGGA < 41bp 0.526607344517566 0.873379946124183 0.25348884 0.2777241 prediction 0.693545203213235 Functional Gain - FRMPD3 ENSG00000147234 CDS Human protein_coding chrX:106845790 chrX:106845791 nonsynonymous SNV 0.936 1 22 hPsi_associated_SNPs_22578 0 0 0 0 0 exosome 0.438632642920872 0.439081591062976 0 0 hPsi_site_16302 iPseU_CNN:0;iRNA_PseU:0 16303 chr10 88414596 88414596 1 + G A LUSC 88414595 + 88414575 88414615 41 GCCCAACCCAAGAGCCCAGCTGCATGGCCACCCCAGCACCA GCCCAACCCAAGAGCCCAGCTACATGGCCACCCCAGCACCA < 41bp 0.533438284435894 0.880201397799731 0.23777178 0.5908665 prediction 0.693526226727674 Functional Gain - OPN4 ENSG00000122375 CDS Human protein_coding chr10:88414595 chr10:88414596 nonsynonymous SNV 0.036 0 22 hPsi_associated_SNPs_22579 0 0 0 0 1 exosome 0.438718704493885 0.43871835594707 0.181733 0 hPsi_site_16303 iPseU_CNN:0.181733;iRNA_PseU:0 16304 chr11 10789934 10789934 1 + G A UCEC 10789933 + 10789913 10789953 41 TATTTTCGTGAAGCTCGTGATGTATTTGCCCAAGTAAGAGA TATTTTCGTGAAGCTCGTGATATATTTGCCCAAGTAAGAGA < 41bp 0.540686161230815 0.887444480669543 0.23928809 0.6061741 prediction 0.693516638877457 Functional Gain - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10789933 chr11:10789934 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_22580 0 0 1 0 1 Cytosol 0.438725715890894 0.438756700205907 0.2123482 0 hPsi_site_16304 iPseU_CNN:0.2123482;iRNA_PseU:0 16305 chr20 25656961 25656961 1 + C T GBM 25656962 - 25656942 25656982 41 TTCAGGGGAGAAGCCTTTTGTGTGCAAGGAGTGTGGGCGAG TTCAGGGGAGAAGCCTTTTGTATGCAAGGAGTGTGGGCGAG < 41bp 0.536953422212458 0.883704300004082 0.26721638 0.31534213 prediction 0.693501755583249 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656962 chr20:25656961 synonymous SNV . 0 22 hPsi_associated_SNPs_22581 0 0 1 0 0 Cytosol 0.438707192363728 0.438718317825592 0 0 hPsi_site_16305 iPseU_CNN:0;iRNA_PseU:0 16306 chr16 22319508 22319508 1 + C A LUSC 22319507 + 22319487 22319527 41 TCGATGACCTACGATGACATTCCGCACCTCTCAGCCAAGAT TCGATGACCTACGATGACATTACGCACCTCTCAGCCAAGAT < 41bp 0.513381893604194 0.86012649062908 0.32115424 0.616445 prediction 0.693489194049774 Functional Gain - POLR3E ENSG00000058600 CDS Human protein_coding chr16:22319507 chr16:22319508 nonsynonymous SNV 0.954 1 22 hPsi_associated_SNPs_22582 0 0 1 0 2 Ribosome 0.438755307188191 0.449182774973359 0.23289 0 hPsi_site_16306 iPseU_CNN:0.23289;iRNA_PseU:0 16307 chr11 10503716 10503716 1 + C A LUSC 10503715 + 10503695 10503735 41 ACCGCTTCCCGCGGATCACATCCCAGTACCTGGGTCATCCG ACCGCTTCCCGCGGATCACATACCAGTACCTGGGTCATCCG < 41bp 0.48457425064115 0.846727902359006 0.25051957 0.53134507 prediction 0.693455804718012 Functional Gain - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10503715 chr11:10503716 nonsynonymous SNV 0.964 2 22 hPsi_associated_SNPs_22583 0 0 0 0 1 Cytosol 0.438660510887597 0.438244945107276 0.0626901399999999 0 hPsi_site_16307 iPseU_CNN:0.0626901399999999;iRNA_PseU:0 16308 chr7 44733492 44733492 1 + G A UCEC 44733491 + 44733471 44733511 41 CACTGACGTGGCCCGAGTGGTGAATGCCCCCATTTTCCACG CACTGACGTGGCCCGAGTGGTAAATGCCCCCATTTTCCACG < 41bp 0.549264197312186 0.895991573195827 0.33406413 0.7192293 prediction 0.693454751767282 Functional Gain - OGDH ENSG00000105953 CDS Human protein_coding chr7:44733491 chr7:44733492 synonymous SNV . 0 22 hPsi_associated_SNPs_22584 0 0 1 0 1 Nucleus 0.438735629936452 0.438913212474478 0.4384586 0 hPsi_site_16308 iPseU_CNN:0.4384586;iRNA_PseU:0 16309 chr2 206562290 206562290 1 + G A SKCM 206562289 + 206562269 206562309 41 CCCACCGTGCGGAGGTCGTTTGAATTCCAAAGATGCTGGCT CCCACCGTGCGGAGGTCGTTTAAATTCCAAAGATGCTGGCT < 41bp 0.442604682389302 0.846726859856238 0.36278048 0.6359839 prediction 0.693453719712476 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206562289 chr2:206562290 synonymous SNV . 0 22 hPsi_associated_SNPs_22585 0 0 0 0 1 Nucleus 0.438718656436846 0.438718589064832 0.2719678 0 hPsi_site_16309 iPseU_CNN:0.2719678;iRNA_PseU:0 16310 chr19 41223347 41223347 1 + G A rs76358638 41223346 + 41223326 41223366 41 GAGCCCGCGGCAGCTGGCCTTGGAGTAGAGACCGAGAGGCC GAGCCCGCGGCAGCTGGCCTTAGAGTAGAGACCGAGAGGCC < 41bp 0.450293794249554 0.846724713927906 0.20068774 0.41112524 prediction 0.693449427855812 Functional Gain - ITPKC ENSG00000086544 CDS Human protein_coding chr19:41223346 chr19:41223347 nonsynonymous SNV 0.118 1 22 hPsi_associated_SNPs_22586 0 0 0 0 0 Cytosol 0.438718593155703 0.438718592995102 0 0 hPsi_site_16310 iPseU_CNN:0;iRNA_PseU:0 16311 chr8 22175740 22175740 1 + G A SKCM 22175739 + 22175719 22175759 41 GATGCCGCATCAGGAGATTGTGGACAGCCTGAAGCTATGCC GATGCCGCATCAGGAGATTGTAGACAGCCTGAAGCTATGCC < 41bp 0.432548406724743 0.846722020652339 0.36004448 0.5805118 prediction 0.693444041304677 Functional Gain - PIWIL2 ENSG00000197181 CDS Human protein_coding chr8:22175739 chr8:22175740 synonymous SNV . 0 22 hPsi_associated_SNPs_22587 0 0 0 0 2 nucleus 0.438717389206263 0.438720435763119 0.1610236 0 hPsi_site_16311 iPseU_CNN:0.1610236;iRNA_PseU:0 16312 chr6 43484868 43484868 1 + G A SKCM 43484867 + 43484847 43484887 41 GATGGCGGCTTCTCAGGCGGTGGAGGAAATGCGGAGCCGCG GATGGCGGCTTCTCAGGCGGTAGAGGAAATGCGGAGCCGCG < 41bp 0.536710315583204 0.883431593091729 0.3393824 0.8053232 prediction 0.693442555017049 Functional Gain - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43484867 chr6:43484868 synonymous SNV . 0 22 hPsi_associated_SNPs_22588 0 0 1 0 1 Ribosome 0.438716493248822 0.438718716619505 0.6106464 0 hPsi_site_16312 iPseU_CNN:0.6106464;iRNA_PseU:0 16313 chr13 25670757 25670757 1 + G A SKCM 25670756 + 25670736 25670776 41 GAAAATGGTTCCAAGGGTTATGGATTTGTACACTTTGAGAC GAAAATGGTTCCAAGGGTTATAGATTTGTACACTTTGAGAC < 41bp 0.528398619990171 0.875118125107084 0.3529553 0.48073456 prediction 0.693439010233826 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670756 chr13:25670757 nonsynonymous SNV 0.009 4 22 hPsi_associated_SNPs_22589 0 0 0 0 0 Cytosol 0.438718592937363 0.438718589887156 0 0 hPsi_site_16313 iPseU_CNN:0;iRNA_PseU:0 16314 chr16 77228635 77228635 1 + G A STAD 77228634 + 77228614 77228654 41 AGCAGCCCAGGAGCGAAATGTGCTGGCCGAGTGCCGGCTGG AGCAGCCCAGGAGCGAAATGTACTGGCCGAGTGCCGGCTGG < 41bp 0.550500221024129 0.89721907853448 0.30644676 0.88491863 prediction 0.693437715020703 Functional Gain - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228634 chr16:77228635 synonymous SNV . 0 22 hPsi_associated_SNPs_22590 0 0 1 0 0 Ribosome 0.43871857891331 0.438718966167881 0.76983726 0 hPsi_site_16314 iPseU_CNN:0.76983726;iRNA_PseU:0 16315 chr1 11204735 11204735 1 + G A SKCM 11204734 + 11204714 11204754 41 CTCCCACCAGATCTGGCGGATGATCTCTCGTCGCTCGGGGA CTCCCACCAGATCTGGCGGATAATCTCTCGTCGCTCGGGGA < 41bp 0.533730288265733 0.880447154978362 0.24841532 0.4964615 prediction 0.693433733425258 Functional Gain - MTOR ENSG00000198793 CDS Human protein_coding chr1:11204734 chr1:11204735 synonymous SNV . 0 22 hPsi_associated_SNPs_22591 0 0 0 0 1 Nucleus 0.438706865618768 0.438718595935955 0 0 hPsi_site_16315 iPseU_CNN:0;iRNA_PseU:0 16316 chrX 130222655 130222655 1 + G A SKCM 130222654 + 130222634 130222674 41 ACTGCCCGTTCCCATGACGATGAGGAAGGAGCGGGTAACCC ACTGCCCGTTCCCATGACGATAAGGAAGGAGCGGGTAACCC < 41bp 0.453036117441657 0.846712940347176 0.3231707 0.6393176 prediction 0.693425880694353 Functional Gain - ARHGAP36 ENSG00000147256 CDS Human protein_coding chrX:130222654 chrX:130222655 nonsynonymous SNV 0.902 1 22 hPsi_associated_SNPs_22592 0 0 0 0 1 unknown 0.438654809461476 0.438718592993639 0.2786352 0 hPsi_site_16316 iPseU_CNN:0.2786352;iRNA_PseU:0 16317 chr2 170460729 170460729 1 + G A LUAD 170460728 + 170460708 170460748 41 GTCTTTGAATTATTTTCTGATGTGTGCCCCAAAACATGCGA GTCTTTGAATTATTTTCTGATATGTGCCCCAAAACATGCGA < 41bp 0.529570266758539 0.876279135849394 0.35180014 0.5416856 prediction 0.69341773818171 Functional Gain - PPIG ENSG00000138398 CDS Human protein_coding chr2:170460728 chr2:170460729 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_22593 0 0 1 0 2 Cytosol 0.439305826244672 0.438840290570176 0.0833712 0 hPsi_site_16317 iPseU_CNN:0.0833712;iRNA_PseU:0 16318 chr16 22926341 22926341 1 + C A BLCA 22926340 + 22926320 22926360 41 TACTTTGTCACTCAAGAGGCTCCTCGACGCATCTTCAACAT TACTTTGTCACTCAAGAGGCTACTCGACGCATCTTCAACAT < 41bp 0.496195414500944 0.846696511860782 0.33430955 0.8897716 prediction 0.693393023721564 Functional Gain - HS3ST2 ENSG00000122254 CDS Human protein_coding chr16:22926340 chr16:22926341 nonsynonymous SNV 0.850 4 22 hPsi_associated_SNPs_22594 0 0 0 2 1 exosome 0.438667851020424 0.43815724876327 0.7795432 0 hPsi_site_16318 iPseU_CNN:0.7795432;iRNA_PseU:0 16319 chr14 90730030 90730030 1 + C A GBM 90730029 + 90730009 90730049 41 GAAAGATCAAAAGTGGATGATCTGAGGGGGACCCCGATGTC GAAAGATCAAAAGTGGATGATATGAGGGGGACCCCGATGTC < 41bp 0.505961315183622 0.85265297434196 0.2686658 0.3761347 prediction 0.693383318316676 Functional Gain - PSMC1 ENSG00000100764 CDS Human protein_coding chr14:90730029 chr14:90730030 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22595 0 0 1 0 1 Ribosome 0.438724882916604 0.438966596594183 0 0 hPsi_site_16319 iPseU_CNN:0;iRNA_PseU:0 16320 chr11 118506155 118506155 1 + G A rs34921074 118506154 + 118506134 118506174 41 GACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAGC GACAAAGCTCTTTGAGGACTTAGAGTTCCAGCAGTTGGAGC < 41bp 0.447344265421146 0.846691568225686 0.23846564 0.26205027 prediction 0.693383136451373 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118506154 chr11:118506155 synonymous SNV . 0 22 hPsi_associated_SNPs_22596 0 0 1 0 1 Cytosol 0.438718943916983 0.438710101070144 0 0 hPsi_site_16320 iPseU_CNN:0;iRNA_PseU:0 16321 chr1 175096171 175096171 1 + C A LUAD 175096170 + 175096150 175096190 41 ACCTGGACGCCCCCCTCTGCTCAGATCCACGGCTACATTCT ACCTGGACGCCCCCCTCTGCTAAGATCCACGGCTACATTCT < 41bp 0.482996545792754 0.846688048534127 0.27899057 0.40139544 prediction 0.693376097068254 Functional Gain - TNN ENSG00000120332 CDS Human protein_coding chr1:175096170 chr1:175096171 nonsynonymous SNV 0.973 0 22 hPsi_associated_SNPs_22597 0 0 0 0 2 exosome 0.438718541778565 0.438718592942243 0 0 hPsi_site_16321 iPseU_CNN:0;iRNA_PseU:0 16322 chr12 53700059 53700059 1 + G A KIRC 53700058 + 53700038 53700078 41 TTTCTACCAACACAGCTGGCTGCCAGCCCGGGCCTTGGTGG TTTCTACCAACACAGCTGGCTACCAGCCCGGGCCTTGGTGG < 41bp 0.544258068522872 0.890941415281097 0.16129035 0.35618472 prediction 0.693366693516451 Functional Gain - C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700058 chr12:53700059 synonymous SNV . 0 22 hPsi_associated_SNPs_22598 0 0 1 0 2 cytosol 0.438792288298715 0.438720916697832 0 0 hPsi_site_16322 iPseU_CNN:0;iRNA_PseU:0 16323 chr14 100847871 100847871 1 + G A rs145682894 100847870 + 100847850 100847890 41 GTGGAGCCACAGGGGCCCCCTGCAGGGCGTGCCCCAGCCCC GTGGAGCCACAGGGGCCCCCTACAGGGCGTGCCCCAGCCCC < 41bp 0.447833791515789 0.846681429927683 0.5513564 0.6495073 prediction 0.693362859855366 Functional Gain - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847870 chr14:100847871 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_22599 0 0 0 0 0 chromatin 0.438718782881852 0.438720838903233 0.1963018 0 hPsi_site_16323 iPseU_CNN:0.1963018;iRNA_PseU:0 16324 chr19 51298203 51298203 1 + G A LUSC 51298202 + 51298182 51298222 41 GTCTCCTGCCATGGCCCCTATGAGGCTGCCATCCCCCCAGG GTCTCCTGCCATGGCCCCTATAAGGCTGCCATCCCCCCAGG < 41bp 0.531920379247322 0.878601762188542 0.2764902 0.52420914 prediction 0.693362765882441 Functional Gain - ACPT ENSG00000142513 CDS Human protein_coding chr19:51298202 chr19:51298203 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_22600 0 0 0 0 1 nucleus 0.438718592995102 0.438718592995102 0.0484182799999999 0 hPsi_site_16324 iPseU_CNN:0.0484182799999999;iRNA_PseU:0 16325 chr1 16073432 16073432 1 + C A rs144951649 16073431 + 16073411 16073451 41 GGTGCGCATGGGCGGCCTCTTCGTGCTGCTGCTGACTGTGG GGTGCGCATGGGCGGCCTCTTAGTGCTGCTGCTGACTGTGG < 41bp 0.50026265805153 0.846940304930752 0.24095437 0.4748062 prediction 0.693355293758445 Functional Gain - TMEM82 ENSG00000162460 CDS Human protein_coding chr1:16073431 chr1:16073432 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_22601 0 0 0 0 1 exosome 0.437660470298057 0.438716781691079 0 0 hPsi_site_16325 iPseU_CNN:0;iRNA_PseU:0 16326 chr21 39671913 39671913 1 + G A LUSC 39671912 + 39671892 39671932 41 TTCCACGTGGACTCCTCCTCTGAGAGCCCCTTCCTCATTCT TTCCACGTGGACTCCTCCTCTAAGAGCCCCTTCCTCATTCT < 41bp 0.447322659175256 0.84666918209925 0.2577286 0.34924477 prediction 0.693338364198499 Functional Gain - KCNJ15 ENSG00000157551 CDS Human protein_coding chr21:39671912 chr21:39671913 nonsynonymous SNV 0.980 5 22 hPsi_associated_SNPs_22602 0 0 0 0 0 exosome 0.438718589585689 0.438718603475246 0 0 hPsi_site_16326 iPseU_CNN:0;iRNA_PseU:0 16327 chr1 16353844 16353844 1 + C A BLCA 16353843 + 16353823 16353863 41 AGGTCATGTCTTCCCACTTCTCTGTCCGGGATTACTGGAGG AGGTCATGTCTTCCCACTTCTATGTCCGGGATTACTGGAGG < 41bp 0.499800675229793 0.84666818268418 0.1464389 0.2554323 prediction 0.693336365368359 Functional Gain - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16353843 chr1:16353844 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22603 0 0 0 0 1 Endoplasmic reticulum 0.438718597778064 0.437962647612876 0 0 hPsi_site_16327 iPseU_CNN:0;iRNA_PseU:0 16328 chr1 161721528 161721528 1 + G A SKCM 161721527 + 161721507 161721547 41 AAGACTGACCAACTTCCCTTTGAAAAAGCCTATGAAAAGCT AAGACTGACCAACTTCCCTTTAAAAAAGCCTATGAAAAGCT < 41bp 0.541919617495602 0.888586880944916 0.54891026 0.79358053 prediction 0.693334526898626 Functional Gain - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161721527 chr1:161721528 nonsynonymous SNV 0.984 2 22 hPsi_associated_SNPs_22604 0 0 1 0 2 Ribosome 0.438718868351131 0.4387179112762 0.48934054 0 hPsi_site_16328 iPseU_CNN:0.48934054;iRNA_PseU:0 16329 chr1 179659928 179659928 1 + G A rs200779614 179659927 + 179659907 179659947 41 TCAAGAATCTGTAGACCAGCTGTCTTTGATTTTGTCTTATG TCAAGAATCTGTAGACCAGCTATCTTTGATTTTGTCTTATG < 41bp 0.467739763982216 0.846663093351704 0.25005877 0.32102925 prediction 0.693326186703408 Functional Gain - TDRD5 ENSG00000162782 CDS Human protein_coding chr1:179659927 chr1:179659928 synonymous SNV . 0 22 hPsi_associated_SNPs_22605 0 0 0 0 1 cytosol 0.437286106303277 0.433648872369434 0 0 hPsi_site_16329 iPseU_CNN:0;iRNA_PseU:0 16330 chr3 49051142 49051142 1 + G A UCEC 49051141 + 49051121 49051161 41 ATATGGAGTGCCCAGCTTCATGCAGCCTGATGACCTGGAGC ATATGGAGTGCCCAGCTTCATACAGCCTGATGACCTGGAGC < 41bp 0.535440646769106 0.882102845219153 0.22899604 0.32772526 prediction 0.693324396900095 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49051141 chr3:49051142 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_22606 0 0 1 1 0 Nucleus 0.439648584439776 0.438793017857328 0 0 hPsi_site_16330 iPseU_CNN:0;iRNA_PseU:0 16331 chr12 49312114 49312114 1 + G A rs148437989 49312113 + 49312093 49312133 41 GGAGAACAGAGTAGAAGATCTGTGGAGAAAGTTCCAGGATG GGAGAACAGAGTAGAAGATCTATGGAGAAAGTTCCAGGATG < 41bp 0.451186436928096 0.846661696318257 0.24376813 0.30122283 prediction 0.693323392636514 Functional Gain - CCDC65 ENSG00000139537 CDS Human protein_coding chr12:49312113 chr12:49312114 synonymous SNV . 0 22 hPsi_associated_SNPs_22607 0 0 0 0 1 chromatin 0.438714822875643 0.438722710175829 0 0 hPsi_site_16331 iPseU_CNN:0;iRNA_PseU:0 16332 chr17 6904997 6904997 1 + C T LAML 6904998 - 6904978 6905018 41 GAATTTCGGACCCAGGACTTTGCCAGGAGCCAGGCAAGTGG GAATTTCGGACCCAGGACTTTACCAGGAGCCAGGCAAGTGG < 41bp 0.519500898129253 0.866160857417796 0.3002652 0.6346064 prediction 0.693319918577087 Functional Gain - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6904998 chr17:6904997 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_22608 0 0 1 0 0 Cytosol 0.438718592995073 0.438718582921743 0.2692128 0 hPsi_site_16332 iPseU_CNN:0.2692128;iRNA_PseU:0 16333 chr10 102743434 102743434 1 + G A UCEC 102743433 + 102743413 102743453 41 TTGCCGCGCTTGGTGGCCTCTGCCTCATCCTGGCCTCCTCC TTGCCGCGCTTGGTGGCCTCTACCTCATCCTGGCCTCCTCC < 41bp 0.447382397102974 0.846655979168309 0.1784581 0.67958266 prediction 0.693311958336617 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102743433 chr10:102743434 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22609 0 0 1 0 0 nucleoplasm 0.438723919815979 0.438737111942867 0.35916532 0 hPsi_site_16333 iPseU_CNN:0.35916532;iRNA_PseU:0 16334 chr10 114169417 114169417 1 + G A BLCA 114169416 + 114169396 114169436 41 AGAGGGGAGAAGAGTGGAATTGAGATCTTATCCCTATATGA AGAGGGGAGAAGAGTGGAATTAAGATCTTATCCCTATATGA < 41bp 0.53939661925197 0.886051615810975 0.28644374 0.56278497 prediction 0.693309993118011 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114169416 chr10:114169417 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22610 0 0 0 0 1 Ribosome 0.438546974838705 0.438712594424452 0.12556994 0 hPsi_site_16334 iPseU_CNN:0.12556994;iRNA_PseU:0 16335 chr16 84699369 84699369 1 + G A rs111568217 84699368 + 84699348 84699388 41 GCCTACTTTGTGAGCTCAGTTGTGTTCACCTGTGGTTCAGT GCCTACTTTGTGAGCTCAGTTATGTTCACCTGTGGTTCAGT < 41bp 0.496483134288335 0.846652403054944 0.31035534 0.7026138 prediction 0.693304806109888 Functional Gain - KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84699368 chr16:84699369 . . 0 22 hPsi_associated_SNPs_22611 0 0 0 0 0 chromatin 0.439436627096745 0.431826830034305 0.4052276 0 hPsi_site_16335 iPseU_CNN:0.4052276;iRNA_PseU:0 16336 chr22 24034627 24034627 1 + C A READ 24034626 + 24034606 24034646 41 AAAGCTGGCCTTCAGGAACCTCTCCTGGCCTGGACTGGGCT AAAGCTGGCCTTCAGGAACCTATCCTGGCCTGGACTGGGCT < 41bp 0.48331662698968 0.846651230378532 0.23184586 0.28048873 prediction 0.693302460757063 Functional Gain - RGL4 ENSG00000159496 CDS Human protein_coding chr22:24034626 chr22:24034627 synonymous SNV . 0 22 hPsi_associated_SNPs_22612 0 0 0 0 1 chromatin 0.438718592995057 0.438718592995102 0 0 hPsi_site_16336 iPseU_CNN:0;iRNA_PseU:0 16337 chr16 27460147 27460147 1 + C T UCEC 27460148 - 27460128 27460168 41 CAGCTGCAGGGCCAGGTGCATGGCCCCTCTGCATCTAGCAC CAGCTGCAGGGCCAGGTGCATAGCCCCTCTGCATCTAGCAC < 41bp 0.458638661399702 0.84664157891922 0.2638963 0.35696653 prediction 0.693283157838439 Functional Gain - IL21R ENSG00000103522 CDS Human protein_coding chr16:27460148 chr16:27460147 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_22613 0 0 0 0 0 nucleus 0.438718688086704 0.438241293918966 0 0 hPsi_site_16337 iPseU_CNN:0;iRNA_PseU:0 16338 chr19 10741992 10741992 1 + G A UCEC 10741991 + 10741971 10742011 41 CGACCGCTACCTCACGTACCTGAATGCTCGCAGCTCCCGGG CGACCGCTACCTCACGTACCTAAATGCTCGCAGCTCCCGGG < 41bp 0.434858186884558 0.846636580730159 0.1829035 0.3188659 prediction 0.693273161460318 Functional Gain - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10741991 chr19:10741992 synonymous SNV . 0 22 hPsi_associated_SNPs_22614 0 0 1 0 2 Ribosome 0.438718689057296 0.438718552575861 0 0 hPsi_site_16338 iPseU_CNN:0;iRNA_PseU:0 16339 chr4 27019403 27019403 1 + G A UCEC 27019402 + 27019382 27019422 41 CCGTTCACGCCGCAGCATTGTGCCGTCCTCGCCTCAGCCTC CCGTTCACGCCGCAGCATTGTACCGTCCTCGCCTCAGCCTC < 41bp 0.434721921506007 0.846634422825226 0.51975495 0.8514613 prediction 0.693268845650453 Functional Gain - STIM2 ENSG00000109689 CDS Human protein_coding chr4:27019402 chr4:27019403 synonymous SNV . 0 22 hPsi_associated_SNPs_22615 0 0 0 0 1 Nucleus 0.438766950156459 0.438382157586124 0.6634127 0 hPsi_site_16339 iPseU_CNN:0.6634127;iRNA_PseU:0 16340 chr11 71948538 71948538 1 + G A BLCA 71948537 + 71948517 71948557 41 GTCCGGGGCCGTGGTGGGGCTGAGGCCCGTGGCCCACCACC GTCCGGGGCCGTGGTGGGGCTAAGGCCCGTGGCCCACCACC < 41bp 0.543963982962953 0.890595607041506 0.23291078 0.5752809 prediction 0.693263248157105 Functional Gain - INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71948537 chr11:71948538 nonsynonymous SNV 0.882 0 22 hPsi_associated_SNPs_22616 0 0 1 0 0 Cytosol 0.436207560370568 0.438720951140397 0.1505618 0 hPsi_site_16340 iPseU_CNN:0.1505618;iRNA_PseU:0 16341 chr1 175105038 175105038 1 + G A rs76088304 175105037 + 175105017 175105057 41 TTCAAGCGATGGAGGAGCTATGTGGAAGGCTTTGGGGACCC TTCAAGCGATGGAGGAGCTATATGGAAGGCTTTGGGGACCC < 41bp 0.445464331873255 0.84662647092127 0.32484835 0.43138602 prediction 0.69325294184254 Functional Gain - TNN ENSG00000120332 CDS Human protein_coding chr1:175105037 chr1:175105038 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_22617 0 0 0 0 2 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_16341 iPseU_CNN:0;iRNA_PseU:0 16342 chr1 15944185 15944185 1 + G A UCEC 15944184 + 15944164 15944204 41 CCATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCC CCATGCTGCTCACCGTGTACTATGTGCGGAGGGACCTCTCC < 41bp 0.470753184576183 0.846624220143847 0.58476025 0.68382484 prediction 0.693248440287695 Functional Gain - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15944184 chr1:15944185 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22618 0 0 1 0 0 Ribosome 0.441558047930764 0.43911889237992 0.19812918 0 hPsi_site_16342 iPseU_CNN:0.19812918;iRNA_PseU:0 16343 chr6 106553564 106553564 1 + G A STAD 106553563 + 106553543 106553583 41 CCAGCATGAAGGACAAGGCCTGTAGCCCCACAAGCGGGTCT CCAGCATGAAGGACAAGGCCTATAGCCCCACAAGCGGGTCT < 41bp 0.446382658915896 0.846618342486874 0.3456747 0.43610328 prediction 0.693236684973749 Functional Gain - PRDM1 ENSG00000057657 CDS Human protein_coding chr6:106553563 chr6:106553564 nonsynonymous SNV 0.353 0 22 hPsi_associated_SNPs_22619 0 0 0 0 0 cytosol 0.438718592994837 0.438718592965655 0 0 hPsi_site_16343 iPseU_CNN:0;iRNA_PseU:0 16344 chr1 44685496 44685496 1 + G A UCEC 44685495 + 44685475 44685515 41 CAGATGAAGCTGCCAAGCTCTGTGGGACAGAAGAAGATCAA CAGATGAAGCTGCCAAGCTCTATGGGACAGAAGAAGATCAA < 41bp 0.441701649026743 0.846616577801292 0.30710542 0.3333064 prediction 0.693233155602583 Functional Gain - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44685495 chr1:44685496 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22620 0 0 1 0 2 chromatin 0.439403593580226 0.439730670150251 0 0 hPsi_site_16344 iPseU_CNN:0;iRNA_PseU:0 16345 chr7 128128193 128128193 1 + C A UCEC 128128192 + 128128172 128128212 41 TTTATTGCTGTGATTTTTCTTCCACAGCTATAGAACTGGTC TTTATTGCTGTGATTTTTCTTACACAGCTATAGAACTGGTC < 41bp 0.498519598477279 0.846601477167387 0.23489615 0.2822131 prediction 0.693202954334774 Functional Gain - METTL2B ENSG00000165055 CDS Human protein_coding chr7:128128192 chr7:128128193 nonsynonymous SNV 0.984 2 22 hPsi_associated_SNPs_22621 0 0 1 0 2 Ribosome 0.438718528422996 0.438718866925105 0 0 hPsi_site_16345 iPseU_CNN:0;iRNA_PseU:0 16346 chr4 1389465 1389465 1 + G A COAD 1389464 + 1389444 1389484 41 TGCCTGCCTGCTCACACACGTGCCCATGTGGAGTGCCCGCC TGCCTGCCTGCTCACACACGTACCCATGTGGAGTGCCCGCC < 41bp 0.492065528106687 0.846601046991698 0.26591504 0.50530446 prediction 0.693202093983396 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389464 chr4:1389465 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_22622 0 0 1 0 0 chromatin 0.43871735963869 0.438622422642872 0.0106089199999999 0 hPsi_site_16346 iPseU_CNN:0.0106089199999999;iRNA_PseU:0 16347 chr2 103128695 103128695 1 + G A COAD 103128694 + 103128674 103128714 41 TTAAAGGCTGGAATCGAAGATGTGTGTGGGCACTGGAGTCA TTAAAGGCTGGAATCGAAGATATGTGTGGGCACTGGAGTCA < 41bp 0.44457915429968 0.846580982484068 0.28692222 0.5739291 prediction 0.693161964968136 Functional Gain - SLC9A4 ENSG00000180251 CDS Human protein_coding chr2:103128694 chr2:103128695 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_22623 0 0 0 0 2 exosome 0.438733116190993 0.438733425430932 0.1478582 0 hPsi_site_16347 iPseU_CNN:0.1478582;iRNA_PseU:0 16348 chr7 43830867 43830867 1 + G A rs142693095 43830866 + 43830846 43830886 41 AGAAGGGAGCTCGGGAGCATTGATGGAGTCCAGCAGATTTC AGAAGGGAGCTCGGGAGCATTAATGGAGTCCAGCAGATTTC < 41bp 0.442069807417159 0.846572924964789 0.28797925 0.40062085 prediction 0.693145849929577 Functional Gain - BLVRA ENSG00000106605 CDS Human protein_coding chr7:43830866 chr7:43830867 nonsynonymous SNV 0.530 0 22 hPsi_associated_SNPs_22624 0 0 1 0 1 Ribosome 0.4387185260062 0.43689355572706 0 0 hPsi_site_16348 iPseU_CNN:0;iRNA_PseU:0 16349 chr1 183197653 183197653 1 + G A UCEC 183197652 + 183197632 183197672 41 GTGACCGGCTGACAGGCAGGTGTTTGAAGTGTATCCACAAC GTGACCGGCTGACAGGCAGGTATTTGAAGTGTATCCACAAC < 41bp 0.436383857620371 0.846572106781166 0.5105516 0.8654406 prediction 0.693144213562331 Functional Gain - LAMC2 ENSG00000058085 CDS Human protein_coding chr1:183197652 chr1:183197653 nonsynonymous SNV 0.902 5 22 hPsi_associated_SNPs_22625 0 0 0 0 0 exosome 0.438718402272173 0.438718058112593 0.709778 0 hPsi_site_16349 iPseU_CNN:0.709778;iRNA_PseU:0 16350 chr11 130066561 130066561 1 + C A LUSC 130066560 + 130066540 130066580 41 GTCCTACACCGACACCGGCTTCTTAGCTGAATACCTCTCCT GTCCTACACCGACACCGGCTTATTAGCTGAATACCTCTCCT < 41bp 0.499092374760322 0.84657160356398 0.393944 0.32576308 prediction 0.69314320712796 Functional Gain - ST14 ENSG00000149418 CDS Human protein_coding chr11:130066560 chr11:130066561 nonsynonymous SNV 0.099 2 22 hPsi_associated_SNPs_22626 0 0 0 0 2 Ribosome 0.438718592994553 0.43871885755437 0 0 hPsi_site_16350 iPseU_CNN:0;iRNA_PseU:0 16351 chr1 203040855 203040855 1 + G A rs188980339 203040854 + 203040834 203040874 41 GGAAAGAGAGTTCAATAACCTGTTGGCCTTGGGCACAGACC GGAAAGAGAGTTCAATAACCTATTGGCCTTGGGCACAGACC < 41bp 0.443660887367777 0.846569811152299 0.4578749 0.5277287 prediction 0.693139622304598 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203040854 chr1:203040855 synonymous SNV . 0 22 hPsi_associated_SNPs_22627 0 0 1 0 2 chromatin 0.4387195296131 0.438719631551753 0.0554574000000001 0 hPsi_site_16351 iPseU_CNN:0.0554574000000001;iRNA_PseU:0 16352 chr15 65918203 65918203 1 + C A GBM 65918202 + 65918182 65918222 41 GCTGCTGCTGGCCTATGCCTTCTATGTGTTCACCATGAAGT GCTGCTGCTGGCCTATGCCTTATATGTGTTCACCATGAAGT < 41bp 0.507548400125988 0.854110452185775 0.39806196 0.37340155 prediction 0.693124104119574 Functional Gain - SLC24A1 ENSG00000074621 CDS Human protein_coding chr15:65918202 chr15:65918203 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_22628 0 0 1 0 0 Endoplasmic reticulum 0.431463189095057 0.43933896048764 0 0 hPsi_site_16352 iPseU_CNN:0;iRNA_PseU:0 16353 chr21 45821585 45821585 1 + G A SKCM 45821584 + 45821564 45821604 41 GGAGAAGAGGCTGCAGGATGTGGGCACCCCCGCGGCCCGCG GGAGAAGAGGCTGCAGGATGTAGGCACCCCCGCGGCCCGCG < 41bp 0.441647581283426 0.846558625860652 0.27983284 0.33850914 prediction 0.693117251721304 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45821584 chr21:45821585 synonymous SNV . 0 22 hPsi_associated_SNPs_22629 0 0 0 0 1 Ribosome 0.438718592995551 0.438718592461408 0 0 hPsi_site_16353 iPseU_CNN:0;iRNA_PseU:0 16354 chr10 23257339 23257339 1 + C A LUAD 23257338 + 23257318 23257358 41 GACAGGGGGTCTTAAAAAGCTCCTGTCATTTGCAGAAAACT GACAGGGGGTCTTAAAAAGCTACTGTCATTTGCAGAAAACT < 41bp 0.497967304585519 0.84655796722042 0.21259591 0.37795663 prediction 0.69311593444084 Functional Gain - ARMC3 ENSG00000165309 CDS Human protein_coding chr10:23257338 chr10:23257339 synonymous SNV . 0 22 hPsi_associated_SNPs_22630 0 0 0 0 1 exosome 0.438718592998903 0.438718608902697 0 0 hPsi_site_16354 iPseU_CNN:0;iRNA_PseU:0 16355 chr17 45299064 45299064 1 + G A LUSC 45299063 + 45299043 45299083 41 TGAAGAGATGAATGTCAAGATGCTGGACTTTGAGACGTTCT TGAAGAGATGAATGTCAAGATACTGGACTTTGAGACGTTCT < 41bp 0.454397494862625 0.846556186857866 0.18986389 0.58415025 prediction 0.693112373715732 Functional Gain - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45299063 chr17:45299064 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_22631 0 0 0 0 1 Cytosol 0.438183878731977 0.438576778950441 0.1683005 0 hPsi_site_16355 iPseU_CNN:0.1683005;iRNA_PseU:0 16356 chr17 48741394 48741394 1 + C A UCEC 48741393 + 48741373 48741413 41 GTCAGTGGATGCCCAGCGCTTCATGGACCTTGCCCCCTTCC GTCAGTGGATGCCCAGCGCTTAATGGACCTTGCCCCCTTCC < 41bp 0.519084248528261 0.86563975703537 0.64701116 0.8226169 prediction 0.693111017014218 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48741393 chr17:48741394 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_22632 0 0 0 0 2 Endoplasmic reticulum 0.43865607448157 0.438704557083957 0.35121148 0 hPsi_site_16356 iPseU_CNN:0.35121148;iRNA_PseU:0 16357 chr18 77659600 77659600 1 + G A THCA 77659599 + 77659579 77659619 41 CAGCATCCTCAGCGGCATCCTGCTCATGGCCTTCCCGGTCA CAGCATCCTCAGCGGCATCCTACTCATGGCCTTCCCGGTCA < 41bp 0.520688682368196 0.867242103739467 0.1698646 0.3646941 prediction 0.693106842742543 Functional Gain - KCNG2 ENSG00000178342 CDS Human protein_coding chr18:77659599 chr18:77659600 synonymous SNV . 0 22 hPsi_associated_SNPs_22633 0 0 0 0 0 exosome 0.438718232355675 0.438791773031369 0 0 hPsi_site_16357 iPseU_CNN:0;iRNA_PseU:0 16358 chr20 44567648 44567648 1 + G A BLCA 44567647 + 44567627 44567667 41 GTGGGTGTGGAGATGGCCAATGAGAATCACGGCAGCCCCCG GTGGGTGTGGAGATGGCCAATAAGAATCACGGCAGCCCCCG < 41bp 0.451196014014046 0.846546526576992 0.2619884 0.2665281 prediction 0.693093053153983 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44567647 chr20:44567648 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22634 0 0 1 0 1 chromatin 0.438719282371636 0.438718591370209 0 0 hPsi_site_16358 iPseU_CNN:0;iRNA_PseU:0 16359 chrX 69283049 69283049 1 + G A BLCA 69283048 + 69283028 69283068 41 CCAGCTGGAGCTGAGGGCCCTGTCGCACGTCCTGAAGACCC CCAGCTGGAGCTGAGGGCCCTATCGCACGTCCTGAAGACCC < 41bp 0.457620854325746 0.846545893473694 0.24440432 0.27236292 prediction 0.693091786947388 Functional Gain - OTUD6A ENSG00000189401 CDS Human protein_coding chrX:69283048 chrX:69283049 synonymous SNV . 0 22 hPsi_associated_SNPs_22635 0 0 0 0 0 unknown 0.438713073880954 0.438715018234375 0 0 hPsi_site_16359 iPseU_CNN:0;iRNA_PseU:0 16360 chr6 393203 393203 1 + G A LIHC 393202 + 393182 393222 41 AGAGTTCGGCATGAGCGCGGTGAGCTGCGGCAACGGGAAGC AGAGTTCGGCATGAGCGCGGTAAGCTGCGGCAACGGGAAGC < 41bp 0.542470888349216 0.889015281190937 0.30965275 0.81816506 prediction 0.693088785683442 Functional Gain - IRF4 ENSG00000137265 CDS Human protein_coding chr6:393202 chr6:393203 synonymous SNV . 0 22 hPsi_associated_SNPs_22636 0 0 0 0 0 exosome 0.43871719056401 0.438719747912248 0.63633012 0 hPsi_site_16360 iPseU_CNN:0.63633012;iRNA_PseU:0 16361 chr16 19490812 19490812 1 + C A BLCA 19490811 + 19490791 19490831 41 CCTTCTGATGGATTTTGTGTTCTCTTTAGTCAATTCCTTCC CCTTCTGATGGATTTTGTGTTATCTTTAGTCAATTCCTTCC < 41bp 0.489731063073109 0.846540821777258 0.27112305 0.3023261 prediction 0.693081643554516 Functional Gain - TMC5 ENSG00000103534 CDS Human protein_coding chr16:19490811 chr16:19490812 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_22637 0 0 0 0 1 cytosol 0.438718592994756 0.438718592494568 0 0 hPsi_site_16361 iPseU_CNN:0;iRNA_PseU:0 16362 chrX 23353157 23353157 1 + G A UCEC 23353156 + 23353136 23353176 41 CGAGGAGAGCGTGGAGCACCTGCTGGCGCCCCAGCACAGCC CGAGGAGAGCGTGGAGCACCTACTGGCGCCCCAGCACAGCC < 41bp 0.534087267522194 0.880605270109868 0.29676697 0.3441435 prediction 0.693036005175348 Functional Gain - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23353156 chrX:23353157 synonymous SNV . 0 22 hPsi_associated_SNPs_22638 0 0 0 0 0 exosome 0.438666627210528 0.438658346595849 0 0 hPsi_site_16362 iPseU_CNN:0;iRNA_PseU:0 16363 chr10 21805337 21805337 1 + C T STAD 21805338 - 21805318 21805358 41 GATTCAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAG GATTCAGGCGCACCAGCTTCTACAAGCCTCCCAGCGTGCAG < 41bp 0.456796213368026 0.846512390305518 0.3423866 0.6488197 prediction 0.693024780611035 Functional Gain - SKIDA1 ENSG00000180592 CDS Human protein_coding chr10:21805338 chr10:21805337 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22639 0 0 0 0 0 Nucleus 0.438718420230823 0.438728335897229 0.2976394 0 hPsi_site_16363 iPseU_CNN:0.2976394;iRNA_PseU:0 16364 chr1 150259039 150259039 1 + C A UCEC 150259038 + 150259018 150259058 41 TCTCAGCTCCCCAGGTACTATCTCCTTTAGCCATGGTCCTT TCTCAGCTCCCCAGGTACTATATCCTTTAGCCATGGTCCTT < 41bp 0.501785949305274 0.84829367859982 0.20394632 0.25167745 prediction 0.693015458589092 Functional Gain - CIART ENSG00000159208 CDS Human protein_coding chr1:150259038 chr1:150259039 synonymous SNV . 0 22 hPsi_associated_SNPs_22640 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_16364 iPseU_CNN:0;iRNA_PseU:0 16365 chr1 212788405 212788405 1 + G A STAD 212788404 + 212788384 212788424 41 CCAGGTCTCTGCCTCGGAAGTGAGTGCTTCTGCCATCGTCC CCAGGTCTCTGCCTCGGAAGTAAGTGCTTCTGCCATCGTCC < 41bp 0.444539645830055 0.846507464190791 0.19495413 0.3509251 prediction 0.693014928381582 Functional Gain - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212788404 chr1:212788405 synonymous SNV . 0 22 hPsi_associated_SNPs_22641 0 0 1 0 1 Cytoplasm 0.438718780848504 0.438611291971666 0 0 hPsi_site_16365 iPseU_CNN:0;iRNA_PseU:0 16366 chr7 19184801 19184801 1 + G A LUAD 19184800 + 19184780 19184820 41 ACTTCGCACTCCTCTTCTTCTGGGTCCCCCTCTTCAAACCG ACTTCGCACTCCTCTTCTTCTAGGTCCCCCTCTTCAAACCG < 41bp 0.524699287906943 0.87119725811369 0.1982421 0.28617144 prediction 0.692995940413493 Functional Gain - FERD3L ENSG00000146618 CDS Human protein_coding chr7:19184800 chr7:19184801 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_22642 0 0 0 0 0 unknown 0.438719006526475 0.438718624082815 0 0 hPsi_site_16366 iPseU_CNN:0;iRNA_PseU:0 16367 chr13 27847630 27847630 1 + G A HNSC 27847629 + 27847609 27847649 41 AAGCCCCCTCTGCACTGGGGTGAACTATCTCAGACAGATGC AAGCCCCCTCTGCACTGGGGTAAACTATCTCAGACAGATGC < 41bp 0.528939701652946 0.875436446776839 0.38926417 0.7859939 prediction 0.692993490247786 Functional Gain - RASL11A ENSG00000122035 CDS Human protein_coding chr13:27847629 chr13:27847630 synonymous SNV . 0 22 hPsi_associated_SNPs_22643 0 0 1 0 0 Ribosome 0.438718801025705 0.438718592993212 0.5719878 0 hPsi_site_16367 iPseU_CNN:0.5719878;iRNA_PseU:0 16368 chr17 73565355 73565355 1 + C A BLCA 73565354 + 73565334 73565374 41 CCGGCTGGGCATCCAGAAGATCTTCCTCTGCAAGTACAGCG CCGGCTGGGCATCCAGAAGATATTCCTCTGCAAGTACAGCG < 41bp 0.508983605564766 0.85547747449244 0.33998555 0.60758877 prediction 0.692987737855348 Functional Gain - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73565354 chr17:73565355 synonymous SNV . 0 22 hPsi_associated_SNPs_22644 0 0 1 0 2 Endoplasmic reticulum 0.438718592993902 0.438718594533233 0.21517754 0 hPsi_site_16368 iPseU_CNN:0.21517754;iRNA_PseU:0 16369 chr3 142413348 142413348 1 + G A SKCM 142413347 + 142413327 142413367 41 GAGAACATTTCGGAACTGGATGAATTCCTTGGGAGTCAACC GAGAACATTTCGGAACTGGATAAATTCCTTGGGAGTCAACC < 41bp 0.459602825863929 0.846492441118586 0.6230564 0.73648024 prediction 0.692984882237171 Functional Gain - PLS1 ENSG00000120756 CDS Human protein_coding chr3:142413347 chr3:142413348 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22645 0 0 1 0 2 Nucleus 0.438714865813258 0.43871042443835 0.22684768 0 hPsi_site_16369 iPseU_CNN:0.22684768;iRNA_PseU:0 16370 chr14 39644553 39644553 1 + G A BLCA 39644552 + 39644532 39644572 41 GAGAGTCTTAAGAACGTGGATGAGAACATTCGCAAGCTCAC GAGAGTCTTAAGAACGTGGATAAGAACATTCGCAAGCTCAC < 41bp 0.474806319572903 0.846484418337579 0.26231962 0.43211553 prediction 0.692968836675157 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39644552 chr14:39644553 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22646 0 0 1 0 1 Nucleus 0.4386066685414 0.438710509582901 0 0 hPsi_site_16370 iPseU_CNN:0;iRNA_PseU:0 16371 chr14 77857574 77857574 1 + G A UCEC 77857573 + 77857553 77857593 41 AAGAGAATGAGGAATTACCTTGCACTGAACCATAGGGGAAA AAGAGAATGAGGAATTACCTTACACTGAACCATAGGGGAAA < 41bp 0.487319340807022 0.846483268374271 0.22502568 0.6776516 prediction 0.692966536748542 Functional Gain - SAMD15 ENSG00000100583 CDS Human protein_coding chr14:77857573 chr14:77857574 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22647 0 0 0 0 0 exosome 0.438718592996235 0.438718590987305 0.3553032 0 hPsi_site_16371 iPseU_CNN:0.3553032;iRNA_PseU:0 16372 chr9 96428049 96428049 1 + G A UCEC 96428048 + 96428028 96428068 41 GGAGGACAAGCCCAAGCCCGTGCGGGATGAGTATGAGTACG GGAGGACAAGCCCAAGCCCGTACGGGATGAGTATGAGTACG < 41bp 0.433993840680527 0.846478662060659 0.2773333 0.7962857 prediction 0.692957324121317 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96428048 chr9:96428049 synonymous SNV . 0 22 hPsi_associated_SNPs_22648 0 0 1 0 2 chromatin 0.438719201209697 0.438718595802288 0.5925714 0 hPsi_site_16372 iPseU_CNN:0.5925714;iRNA_PseU:0 16373 chr19 36349734 36349734 1 + G A SKCM 36349733 + 36349713 36349753 41 GAATTGCTGTGGTTCCGAGATGGGGTCCTGTTGGATGGAGC GAATTGCTGTGGTTCCGAGATAGGGTCCTGTTGGATGGAGC < 41bp 0.547265622256906 0.893738553624515 0.3229075 0.3462937 prediction 0.692945862735218 Functional Gain - KIRREL2 ENSG00000126259 CDS Human protein_coding chr19:36349733 chr19:36349734 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22649 0 0 0 0 1 exosome 0.438701046420509 0.438717191246122 0 0 hPsi_site_16373 iPseU_CNN:0;iRNA_PseU:0 16374 chr10 74671549 74671549 1 + G A SKCM 74671548 + 74671528 74671568 41 TCTGAGAAAGGCTACCAGTGTGAATGTCCCCGGGGCCTGGT TCTGAGAAAGGCTACCAGTGTAAATGTCCCCGGGGCCTGGT < 41bp 0.437455204477641 0.846469045113244 0.63225234 0.87457323 prediction 0.692938090226488 Functional Gain - OIT3 ENSG00000138315 CDS Human protein_coding chr10:74671548 chr10:74671549 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_22650 0 0 0 0 2 Cytosol 0.438718418973136 0.438718592994046 0.48464178 0 hPsi_site_16374 iPseU_CNN:0.48464178;iRNA_PseU:0 16375 chr17 14110135 14110135 1 + C A UCEC 14110134 + 14110114 14110154 41 GACCCCCGCACAGGCGCATTTCTCCTGGGAGGAATCCTCTA GACCCCCGCACAGGCGCATTTATCCTGGGAGGAATCCTCTA < 41bp 0.503692608191832 0.850158571726923 0.14633521 0.22032937 prediction 0.692931927070183 Functional Gain - COX10 ENSG00000006695 CDS Human protein_coding chr17:14110134 chr17:14110135 nonsynonymous SNV 0.871 2 22 hPsi_associated_SNPs_22651 0 0 1 0 1 Cytosol 0.43871859299371 0.438718592995795 0 0 hPsi_site_16375 iPseU_CNN:0;iRNA_PseU:0 16376 chr8 193745 193745 1 + G A CESC 193744 + 193724 193764 41 AAACAGCTCTGCAAATCAGTTGTGCTTTCCCAATTGGAGCA AAACAGCTCTGCAAATCAGTTATGCTTTCCCAATTGGAGCA < 41bp 0.534958786696774 0.8814239988789 0.2815359 0.45107338 prediction 0.692930424364252 Functional Gain - ZNF596 ENSG00000172748 CDS Human protein_coding chr8:193744 chr8:193745 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_22652 0 0 0 0 2 cytosol 0.438722224373782 0.438719015843688 0 0 hPsi_site_16376 iPseU_CNN:0;iRNA_PseU:0 16377 chr1 43828709 43828709 1 + G A LUAD 43828708 + 43828688 43828728 41 CAGATGAGACCCTGAGGCTATGGCGCTGTTTTGAGTTGGAC CAGATGAGACCCTGAGGCTATAGCGCTGTTTTGAGTTGGAC < 41bp 0.46521204993904 0.846460633292297 0.32851568 0.6033224 prediction 0.692921266584594 Functional Gain - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43828708 chr1:43828709 stopgain 0.998 1 22 hPsi_associated_SNPs_22653 0 0 1 0 1 Ribosome 0.438713525798433 0.438645681725447 0.2066448 0 hPsi_site_16377 iPseU_CNN:0.2066448;iRNA_PseU:0 16378 chr3 97887816 97887816 1 + G A SKCM 97887815 + 97887795 97887835 41 CTTCTTAGCTAAGAGTAAGATGATATCTCTCTCTGAATGCA CTTCTTAGCTAAGAGTAAGATAATATCTCTCTCTGAATGCA < 41bp 0.496532290843876 0.846447309969084 0.18129638 0.24210718 prediction 0.692894619938168 Functional Gain - OR5H15 ENSG00000233412 CDS Human protein_coding chr3:97887815 chr3:97887816 nonsynonymous SNV 0.020 0 22 hPsi_associated_SNPs_22654 0 0 0 0 0 unknown 0.438719284343599 0.438718864495496 0 0 hPsi_site_16378 iPseU_CNN:0;iRNA_PseU:0 16379 chr14 21250199 21250199 1 + G A UCEC 21250198 + 21250178 21250218 41 CTTCAGGAAAGTATCCCCAGTGCCGCTATAGTGCTGCTGCC CTTCAGGAAAGTATCCCCAGTACCGCTATAGTGCTGCTGCC < 41bp 0.537640443741566 0.884087455166364 0.26215574 0.6235807 prediction 0.692894022849597 Functional Gain - RNASE6 ENSG00000169413 CDS Human protein_coding chr14:21250198 chr14:21250199 nonsynonymous SNV 0.048 4 22 hPsi_associated_SNPs_22655 0 0 0 0 0 Endoplasmic reticulum 0.43867820123052 0.43869743701381 0.2471614 0 hPsi_site_16379 iPseU_CNN:0.2471614;iRNA_PseU:0 16380 chr12 58111971 58111971 1 + G A SARC 58111970 + 58111950 58111990 41 GAGCAGCCTGTGGATGATGCTGCAGAAGTCCCTCAGAGGGA GAGCAGCCTGTGGATGATGCTACAGAAGTCCCTCAGAGGGA < 41bp 0.546745331156501 0.893190550550467 0.40673763 0.66585386 prediction 0.692890438787933 Functional Gain - OS9 ENSG00000135506 CDS Human protein_coding chr12:58111970 chr12:58111971 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_22656 0 0 1 0 1 Nucleus 0.438723263898422 0.439062151158896 0.33170772 0 hPsi_site_16380 iPseU_CNN:0.33170772;iRNA_PseU:0 16381 chr11 65392707 65392707 1 + G A UCEC 65392706 + 65392686 65392726 41 CTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGGC CTGTGGCCTCCTGGTGGCACTATCCTACCACCTGAGCCGGC < 41bp 0.45107820293863 0.846433364928891 0.26807612 0.67096925 prediction 0.692866729857781 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392706 chr11:65392707 synonymous SNV . 0 22 hPsi_associated_SNPs_22657 0 0 1 0 2 Ribosome 0.438718593394564 0.438718594067865 0.3419385 0 hPsi_site_16381 iPseU_CNN:0.3419385;iRNA_PseU:0 16382 chr17 77758484 77758484 1 + G A rs3751956 77758483 + 77758463 77758503 41 CACAAGCAAAAGTGAGAAGCTGGCTTCCAGAGCAGTGGCGC CACAAGCAAAAGTGAGAAGCTAGCTTCCAGAGCAGTGGCGC < 41bp 0.455701046237813 0.84640413836978 0.42171702 0.55978113 prediction 0.692808276739559 Functional Gain - CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758483 chr17:77758484 synonymous SNV . 0 22 hPsi_associated_SNPs_22658 0 0 1 0 0 chromatin 0.438549947628127 0.439423135333947 0.11956226 0 hPsi_site_16382 iPseU_CNN:0.11956226;iRNA_PseU:0 16383 chr1 207868009 207868009 1 + C A LUAD 207868008 + 207867988 207868028 41 GAAGTTGTGGAGTTTAGGTGTCAGCCTGGCTTTGGCATGAA GAAGTTGTGGAGTTTAGGTGTAAGCCTGGCTTTGGCATGAA < 41bp 0.504997805788761 0.851384870153932 0.23279104 0.64163166 prediction 0.692774128730341 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207868008 chr1:207868009 nonsynonymous SNV 0.444 0 22 hPsi_associated_SNPs_22659 0 0 0 0 1 Endoplasmic reticulum 0.438718592995101 0.438718592995102 0.28326332 0 hPsi_site_16383 iPseU_CNN:0.28326332;iRNA_PseU:0 16384 chrX 30269445 30269445 1 + G A BRCA 30269444 + 30269424 30269464 41 TGGGGTCCGAGAGCCTATGCTGAAACCACCAAGATGAAAGT TGGGGTCCGAGAGCCTATGCTAAAACCACCAAGATGAAAGT < 41bp 0.535671056387959 0.882056253569783 0.19911614 0.31643087 prediction 0.692770394363648 Functional Gain - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30269444 chrX:30269445 nonsynonymous SNV 0.190 4 22 hPsi_associated_SNPs_22660 0 0 0 0 0 nucleolus 0.438371217781826 0.438717609535845 0 0 hPsi_site_16384 iPseU_CNN:0;iRNA_PseU:0 16385 chr16 89805301 89805301 1 + G A rs17227403 89805300 + 89805280 89805320 41 TTGACGTTACCTCTGCCACGTGTGAGAAGCTCTTTTTCGGG TTGACGTTACCTCTGCCACGTATGAGAAGCTCTTTTTCGGG < 41bp 0.463093457126864 0.846379899892244 0.38587138 0.5027421 prediction 0.692759799784488 Functional Gain - FANCA ENSG00000187741 CDS Human protein_coding chr16:89805300 chr16:89805301 nonsynonymous SNV 0.286 0 22 hPsi_associated_SNPs_22661 0 0 1 3 0 Cytosol 0.438718035747198 0.4387021712761 0.00548419999999994 0 hPsi_site_16385 iPseU_CNN:0.00548419999999994;iRNA_PseU:0 16386 chrX 154319081 154319081 1 + G A PAAD 154319080 + 154319060 154319100 41 CTGGCCGGGTACTCTACACTTGCTTCCAATCCATACAGGCC CTGGCCGGGTACTCTACACTTACTTCCAATCCATACAGGCC < 41bp 0.438352462218102 0.846379148177895 0.40557066 0.8229066 prediction 0.69275829635579 Functional Gain - BRCC3 ENSG00000185515 CDS Human protein_coding chrX:154319080 chrX:154319081 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22662 0 0 1 0 1 Ribosome 0.438719516290249 0.438718564881192 0.6458132 0 hPsi_site_16386 iPseU_CNN:0.6458132;iRNA_PseU:0 16387 chr1 11810354 11810354 1 + G A rs17875961 11810353 + 11810333 11810373 41 CTTGGACCTAAGATGGAATGTGTCCCCAGCTCAGGGATTGC CTTGGACCTAAGATGGAATGTATCCCCAGCTCAGGGATTGC < 41bp 0.522499532479431 0.868850608181671 0.19843009 0.3165973 prediction 0.692702151404479 Functional Gain - AGTRAP ENSG00000177674 UTR3 Human protein_coding chr1:11810353 chr1:11810354 . . 0 22 hPsi_associated_SNPs_22663 0 0 1 2 0 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_16387 iPseU_CNN:0;iRNA_PseU:0 16388 chr10 102748142 102748142 1 + G A LUSC 102748141 + 102748121 102748161 41 GTGTTGCCTGTAACTGCAACTGAAATCCGCCAGTATTTGCG GTGTTGCCTGTAACTGCAACTAAAATCCGCCAGTATTTGCG < 41bp 0.451825810768263 0.846343436749438 0.18734494 0.23472193 prediction 0.692686873498876 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748141 chr10:102748142 nonsynonymous SNV 0.360 4 22 hPsi_associated_SNPs_22664 0 0 1 0 0 unknown 0.438603088327611 0.438716626333685 0 0 hPsi_site_16388 iPseU_CNN:0;iRNA_PseU:0 16389 chr19 36035879 36035879 1 + C T BRCA 36035880 - 36035860 36035900 41 GAGCTTCACGAAATTGTCATTGAGCGCAATGCCGGCCTTAG GAGCTTCACGAAATTGTCATTAAGCGCAATGCCGGCCTTAG < 41bp 0.471294426967643 0.846340458028422 0.3457787 0.6160654 prediction 0.692680916056845 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36035880 chr19:36035879 synonymous SNV . 0 22 hPsi_associated_SNPs_22665 0 0 1 0 0 chromatin 0.438845443727913 0.438736552628353 0.2321308 0 hPsi_site_16389 iPseU_CNN:0.2321308;iRNA_PseU:0 16390 chr11 119029287 119029287 1 + C A UCEC 119029286 + 119029266 119029306 41 GGTCCTGACCCACCTACGGTTCATGTCCCACGTGGTTATTG GGTCCTGACCCACCTACGGTTAATGTCCCACGTGGTTATTG < 41bp 0.494951048565303 0.846333701380015 0.3342303 0.68807805 prediction 0.692667402760031 Functional Gain - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119029286 chr11:119029287 nonsynonymous SNV 0.082 1 22 hPsi_associated_SNPs_22666 0 0 0 0 1 exosome 0.438722029302307 0.438716046324134 0.3761561 0 hPsi_site_16390 iPseU_CNN:0.3761561;iRNA_PseU:0 16391 chr16 22826321 22826321 1 + G A rs111703383 22826320 + 22826300 22826340 41 GAAGGGGGGCACCCGGGCCGTGCTGGAGTTTATCCGAGTAC GAAGGGGGGCACCCGGGCCGTACTGGAGTTTATCCGAGTAC < 41bp 0.541317892435666 0.887650920992726 0.3951014 0.7855352 prediction 0.692666057114121 Functional Gain - HS3ST2 ENSG00000122254 CDS Human protein_coding chr16:22826320 chr16:22826321 synonymous SNV . 0 22 hPsi_associated_SNPs_22667 0 0 0 0 1 exosome 0.438718592479637 0.438718616195004 0.5710704 0 hPsi_site_16391 iPseU_CNN:0.5710704;iRNA_PseU:0 16392 chr16 84014684 84014684 1 + G A SKCM 84014683 + 84014663 84014703 41 TGAGGATGTCCTGGCCTCCCTGGAGACCTTGAATCACTCTG TGAGGATGTCCTGGCCTCCCTAGAGACCTTGAATCACTCTG < 41bp 0.448735107069198 0.846326058451933 0.24499756 0.27260223 prediction 0.692652116903866 Functional Gain - NECAB2 ENSG00000103154 CDS Human protein_coding chr16:84014683 chr16:84014684 synonymous SNV . 0 22 hPsi_associated_SNPs_22668 0 0 0 0 2 exosome 0.438718596360628 0.438684933874919 0 0 hPsi_site_16392 iPseU_CNN:0;iRNA_PseU:0 16393 chr15 78885454 78885454 1 + C T SKCM 78885455 - 78885435 78885475 41 CCGATCAAGAACCTGGGCTATGAATTTCCAATCTTCAACAA CCGATCAAGAACCTGGGCTATAAATTTCCAATCTTCAACAA < 41bp 0.516872873992897 0.863195082574228 0.2573768 0.39386767 prediction 0.692644417162662 Functional Gain - CHRNA3;CHRNA5 ENSG00000080644;ENSG00000169684 CDS Human other chr15:78885455 chr15:78885454 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22669 0 0 0 0 1 unknown 0.438729282743234 0.438718591245135 0 0 hPsi_site_16393 iPseU_CNN:0;iRNA_PseU:0 16394 chr1 236902754 236902754 1 + C A STAD 236902753 + 236902733 236902773 41 GGAGAAATGCCAGCTGGAGATCAACTTCAACACGCTGCAGA GGAGAAATGCCAGCTGGAGATAAACTTCAACACGCTGCAGA < 41bp 0.500327969695056 0.846645863586941 0.26791975 0.38205242 prediction 0.69263578778377 Functional Gain - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236902753 chr1:236902754 synonymous SNV . 0 22 hPsi_associated_SNPs_22670 0 0 0 0 1 chromatin 0.445455057876534 0.439389778293473 0 0 hPsi_site_16394 iPseU_CNN:0;iRNA_PseU:0 16395 chr16 56667294 56667294 1 + G A STAD 56667293 + 56667273 56667313 41 GCTCCTGCACGTGCAAAGAGTGCAAATGCACCTCCTGCAAG GCTCCTGCACGTGCAAAGAGTACAAATGCACCTCCTGCAAG < 41bp 0.446203194842621 0.846311716463359 0.40736762 0.7591618 prediction 0.692623432926718 Functional Gain - MT1M ENSG00000205364 CDS Human protein_coding chr16:56667293 chr16:56667294 nonsynonymous SNV 0.385 3 22 hPsi_associated_SNPs_22671 0 0 0 0 1 exosome 0.438788972890126 0.439086375295287 0.5183236 0 hPsi_site_16395 iPseU_CNN:0.5183236;iRNA_PseU:0 16396 chr1 44422596 44422596 1 + G A CESC 44422595 + 44422575 44422615 41 AAGGCCCAGTTCCCTTCTGATGAGGAATATGGATTCTGGTC AAGGCCCAGTTCCCTTCTGATAAGGAATATGGATTCTGGTC < 41bp 0.449425306171747 0.846307096172496 0.45102602 0.58294964 prediction 0.692614192344993 Functional Gain - IPO13 ENSG00000117408 CDS Human protein_coding chr1:44422595 chr1:44422596 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22672 0 0 1 0 1 Ribosome 0.438718592994006 0.438718592995097 0.16589928 0 hPsi_site_16396 iPseU_CNN:0.16589928;iRNA_PseU:0 16397 chr19 35829330 35829330 1 + C A UCEC 35829329 + 35829309 35829349 41 CCCGGGAGCTGAGCTGGATGTCCAGTGTGAGTAGCCACGGA CCCGGGAGCTGAGCTGGATGTACAGTGTGAGTAGCCACGGA < 41bp 0.489760028044198 0.84630315117857 0.32476395 0.6021351 prediction 0.69260630235714 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35829329 chr19:35829330 synonymous SNV . 0 22 hPsi_associated_SNPs_22673 0 0 0 0 0 Endoplasmic reticulum 0.438718925716625 0.438720570033421 0.2042702 0 hPsi_site_16397 iPseU_CNN:0.2042702;iRNA_PseU:0 16398 chr18 63477089 63477089 1 + C A LUAD 63477088 + 63477068 63477108 41 GGAGCAGGCCTACTACACGCTCCGAGCTCAAGCGCTGGATA GGAGCAGGCCTACTACACGCTACGAGCTCAAGCGCTGGATA < 41bp 0.517143195540891 0.863441868717056 0.5283763 0.96395725 prediction 0.692597346352331 Functional Gain - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63477088 chr18:63477089 synonymous SNV . 0 22 hPsi_associated_SNPs_22674 0 0 1 0 0 exosome 0.43871749462325 0.43871825644215 0.8711619 0 hPsi_site_16398 iPseU_CNN:0.8711619;iRNA_PseU:0 16399 chr20 76875 76875 1 + G A SKCM 76874 + 76854 76894 41 TGGTTCCCCAGTATCTATGTTGAATGATCTGATAACATTTG TGGTTCCCCAGTATCTATGTTAAATGATCTGATAACATTTG < 41bp 0.511518148143989 0.857786762196975 0.22329631 0.32282376 prediction 0.692537228105973 Functional Gain - DEFB125 ENSG00000178591 CDS Human protein_coding chr20:76874 chr20:76875 synonymous SNV . 0 22 hPsi_associated_SNPs_22675 0 0 0 0 0 unknown 0.435684597237959 0.438766681645255 0 0 hPsi_site_16399 iPseU_CNN:0;iRNA_PseU:0 16400 chr21 45553603 45553603 1 + G A rs112338501 45553602 + 45553582 45553622 41 GGCGGCTGTGAGGGTCCTGGTGGCCTCGAGGCTCGCTGCGG GGCGGCTGTGAGGGTCCTGGTAGCCTCGAGGCTCGCTGCGG < 41bp 0.472397853338151 0.84626623686543 0.25053614 0.65901107 prediction 0.69253247373086 Functional Gain - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45553602 chr21:45553603 synonymous SNV . 0 22 hPsi_associated_SNPs_22676 0 0 1 0 0 Ribosome 0.438561738161912 0.438718621158177 0.31802214 0 hPsi_site_16400 iPseU_CNN:0.31802214;iRNA_PseU:0 16401 chr1 47608985 47608985 1 + C A COAD 47608984 + 47608964 47609004 41 CCAGGATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGA CCAGGATTCCCCTCTGGAGGTATTTCAGCACGTCTCCTTGA < 41bp 0.515094028606055 0.861357817561796 0.7082393 0.7997073 prediction 0.692527577911482 Functional Gain - CYP4A22 ENSG00000162365 CDS Human protein_coding chr1:47608984 chr1:47608985 synonymous SNV . 0 22 hPsi_associated_SNPs_22677 0 0 0 0 2 exosome 0.438720172378729 0.438718593460661 0.182936 0 hPsi_site_16401 iPseU_CNN:0.182936;iRNA_PseU:0 16402 chr13 52439962 52439962 1 + C A LUAD 52439961 + 52439941 52439981 41 TGGGAAAGAGACCGGAACCTTCTTCAGGAGGACAAGGCCCT TGGGAAAGAGACCGGAACCTTATTCAGGAGGACAAGGCCCT < 41bp 0.496373452922823 0.846263578012298 0.76947033 0.6941797 prediction 0.692527156024595 Functional Gain - CCDC70 ENSG00000123171 CDS Human protein_coding chr13:52439961 chr13:52439962 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_22678 0 0 0 0 0 unknown 0.438719329052194 0.438722417114274 0 0 hPsi_site_16402 iPseU_CNN:0;iRNA_PseU:0 16403 chr1 104068833 104068833 1 + G A LIHC 104068832 + 104068812 104068852 41 TGAGGAGAAAGAGGACTTGCTGAAGTACTTCGGGGCTCAGT TGAGGAGAAAGAGGACTTGCTAAAGTACTTCGGGGCTCAGT < 41bp 0.478420396862919 0.846252533229766 0.3037461 0.61488914 prediction 0.692505066459533 Functional Gain - RNPC3 ENSG00000185946 CDS Human protein_coding chr1:104068832 chr1:104068833 synonymous SNV . 0 22 hPsi_associated_SNPs_22679 0 0 1 0 1 Cytosol 0.438718592995515 0.438718592828575 0.22977828 0 hPsi_site_16403 iPseU_CNN:0.22977828;iRNA_PseU:0 16404 chr6 116600738 116600738 1 + C T rs149638466 116600739 - 116600719 116600759 41 GGTACTCCCCAGATCCGAGTTGTTGGGGGTCGCGGTCATGT GGTACTCCCCAGATCCGAGTTATTGGGGGTCGCGGTCATGT < 41bp 0.479717622058209 0.846250968574328 0.26879668 0.55239177 prediction 0.692501937148656 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600739 chr6:116600738 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22680 0 0 1 0 0 Ribosome 0.438718594647014 0.438718592995739 0.10478354 0 hPsi_site_16404 iPseU_CNN:0.10478354;iRNA_PseU:0 16405 chr6 54002110 54002110 1 + G A rs189886641 54002109 + 54002089 54002129 41 TCCCCGGTGCCTTCCCGGCTTGCCCTTCTCACTGCCATTCT TCCCCGGTGCCTTCCCGGCTTACCCTTCTCACTGCCATTCT < 41bp 0.443446430613833 0.846231895594856 0.22278336 0.37212312 prediction 0.692463791189712 Functional Gain - MLIP ENSG00000146147 CDS Human protein_coding chr6:54002109 chr6:54002110 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_22681 0 0 0 0 0 Cytosol 0.438718593324663 0.438718590844901 0 0 hPsi_site_16405 iPseU_CNN:0;iRNA_PseU:0 16406 chr19 13919732 13919732 1 + G A LUSC 13919731 + 13919711 13919751 41 GGAGCAGATCCAGGAGCAGGTGAAGCAGCTACTGTCCAATG GGAGCAGATCCAGGAGCAGGTAAAGCAGCTACTGTCCAATG < 41bp 0.541807699160914 0.888037691102899 0.36664438 0.7068851 prediction 0.69245998388397 Functional Gain - ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13919731 chr19:13919732 synonymous SNV . 0 22 hPsi_associated_SNPs_22682 0 0 0 0 2 chromatin 0.438718486718875 0.438718702375601 0.4137702 0 hPsi_site_16406 iPseU_CNN:0.4137702;iRNA_PseU:0 16407 chr10 46999535 46999535 1 + G A LUSC 46999534 + 46999514 46999554 41 CAGGCTGAGCCCAAAGCTGCTGAACAGCTGGCTACCACCAC CAGGCTGAGCCCAAAGCTGCTAAACAGCTGGCTACCACCAC < 41bp 0.447462084646355 0.846221837643679 0.30779594 0.35582298 prediction 0.692443675287358 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:46999534 chr10:46999535 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22683 0 0 0 0 0 exosome 0.438718598719723 0.438718590489676 0 0 hPsi_site_16407 iPseU_CNN:0;iRNA_PseU:0 16408 chr5 180335650 180335650 1 + C A HNSC 180335649 + 180335629 180335669 41 GGTGGGGGAGGACGCAGCATTCTCCTGTTTCCTGTCTCCTA GGTGGGGGAGGACGCAGCATTATCCTGTTTCCTGTCTCCTA < 41bp 0.504225782670817 0.850441909758945 0.29618657 0.40760157 prediction 0.692432254176255 Functional Gain - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180335649 chr5:180335650 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_22684 0 0 0 0 1 chromatin 0.438718592993147 0.438705590607848 0 0 hPsi_site_16408 iPseU_CNN:0;iRNA_PseU:0 16409 chr17 79658493 79658493 1 + G A UCEC 79658492 + 79658472 79658512 41 TACAGCACCACTGCCGGGCGTGTGGGCAGATATTCTGTGGA TACAGCACCACTGCCGGGCGTATGGGCAGATATTCTGTGGA < 41bp 0.544672277748364 0.890881992639267 0.23958412 0.29469767 prediction 0.692419429781806 Functional Gain - HGS ENSG00000185359 CDS Human protein_coding chr17:79658492 chr17:79658493 nonsynonymous SNV 0.089 5 22 hPsi_associated_SNPs_22685 0 0 1 0 1 Nucleus 0.438714039208435 0.438718544458313 0 0 hPsi_site_16409 iPseU_CNN:0;iRNA_PseU:0 16410 chr16 1826138 1826138 1 + G A LUAD 1826137 + 1826117 1826157 41 GACCTTCCTGTGCCGCCCAGTGAAGGCGGGCGTCCCCGCAG GACCTTCCTGTGCCGCCCAGTAAAGGCGGGCGTCCCCGCAG < 41bp 0.475055064397468 0.846202869251558 0.23074898 0.48722288 prediction 0.692405738503116 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1826137 chr16:1826138 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22686 0 0 0 0 1 chromatin 0.438718592994126 0.438718592994873 0 0 hPsi_site_16410 iPseU_CNN:0;iRNA_PseU:0 16411 chr4 951640 951640 1 + G A COAD 951639 + 951619 951659 41 AACGTCCCGGACCCCAAGGATGTGAAGGAGAGGTTCAGCGG AACGTCCCGGACCCCAAGGATATGAAGGAGAGGTTCAGCGG < 41bp 0.450322686037465 0.846198253119371 0.27047718 0.3044 prediction 0.692396506238742 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:951639 chr4:951640 nonsynonymous SNV 0.034 4 22 hPsi_associated_SNPs_22687 0 0 1 0 1 chromatin 0.438718593296068 0.438718558676614 0 0 hPsi_site_16411 iPseU_CNN:0;iRNA_PseU:0 16412 chr19 42085857 42085857 1 + G A SARC 42085856 + 42085836 42085876 41 GGTCACGAAGAGGATGAAGCTGTCCTGGTTTAACCATATGC GGTCACGAAGAGGATGAAGCTATCCTGGTTTAACCATATGC < 41bp 0.449805048743042 0.846194786338928 0.2691608 0.44837457 prediction 0.692389572677856 Functional Gain - CEACAM21 ENSG00000007129 CDS Human protein_coding chr19:42085856 chr19:42085857 synonymous SNV . 0 22 hPsi_associated_SNPs_22688 0 0 0 0 0 exosome 0.438717952054548 0.438717937352576 0 0 hPsi_site_16412 iPseU_CNN:0;iRNA_PseU:0 16413 chr7 143748011 143748011 1 + G A rs116000614 143748010 + 143747990 143748030 41 CTGCCCTTCTGTGGGCCCCATGAAATCAACCACTTCTTCTG CTGCCCTTCTGTGGGCCCCATAAAATCAACCACTTCTTCTG < 41bp 0.524449651582199 0.870630091980916 0.20647192 0.2721835 prediction 0.692360880797433 Functional Gain - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143748010 chr7:143748011 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_22689 0 0 0 0 0 unknown 0.438718553715119 0.438718592995102 0 0 hPsi_site_16413 iPseU_CNN:0;iRNA_PseU:0 16414 chr14 38266096 38266096 1 + G A LUAD 38266095 + 38266075 38266115 41 GGAATCAGCTGGAATAGAGCTGAGATGACCATGTGTGCTCT GGAATCAGCTGGAATAGAGCTAAGATGACCATGTGTGCTCT < 41bp 0.47791366560813 0.846169149919105 0.26833874 0.32665753 prediction 0.69233829983821 Functional Gain - TTC6 ENSG00000139865 CDS Human protein_coding chr14:38266095 chr14:38266096 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_22690 0 0 0 1 1 cytosol 0.438746503732069 0.438777235536959 0 0 hPsi_site_16414 iPseU_CNN:0;iRNA_PseU:0 16415 chr7 143792941 143792941 1 + G A LUSC 143792940 + 143792920 143792960 41 CTCCTCCCACCTCTGCGTGGTGGGGCTTTTCTTTGGCAGCG CTCCTCCCACCTCTGCGTGGTAGGGCTTTTCTTTGGCAGCG < 41bp 0.471467438964779 0.846167710189987 0.29894388 0.43213296 prediction 0.692335420379975 Functional Gain - OR2A12 ENSG00000221858 CDS Human protein_coding chr7:143792940 chr7:143792941 synonymous SNV . 0 22 hPsi_associated_SNPs_22691 0 0 0 0 0 unknown 0.438718592966334 0.438718592665268 0 0 hPsi_site_16415 iPseU_CNN:0;iRNA_PseU:0 16416 chr2 18113533 18113533 1 + G A BLCA 18113532 + 18113512 18113552 41 TACCAGAAGCAAAAGGACATTGATGTGGACCAGTGCAGTGA TACCAGAAGCAAAAGGACATTAATGTGGACCAGTGCAGTGA < 41bp 0.453654746632871 0.846147340194095 0.3223134 0.33890134 prediction 0.69229468038819 Functional Gain - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18113532 chr2:18113533 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22692 0 0 0 0 0 Cytosol 0.438798098370439 0.438718663042178 0 0 hPsi_site_16416 iPseU_CNN:0;iRNA_PseU:0 16417 chr3 183954203 183954203 1 + G A rs61744881 183954202 + 183954182 183954222 41 GGGCCCCCAGACGTGCTGGCTGCTCTGGACTGGGCCGTGGG GGGCCCCCAGACGTGCTGGCTACTCTGGACTGGGCCGTGGG < 41bp 0.445866596302834 0.846145556287774 0.2070471 0.41278982 prediction 0.692291112575547 Functional Gain - VWA5B2 ENSG00000145198 CDS Human protein_coding chr3:183954202 chr3:183954203 nonsynonymous SNV 0.057 1 22 hPsi_associated_SNPs_22693 0 0 0 0 1 exosome 0.438747740923523 0.438671347471909 0 0 hPsi_site_16417 iPseU_CNN:0;iRNA_PseU:0 16418 chr4 25335533 25335533 1 + G A GBM 25335532 + 25335512 25335552 41 TTTCACTAATTGCTTTAGGTTGCATGAGCTGATCAAGTTGA TTTCACTAATTGCTTTAGGTTACATGAGCTGATCAAGTTGA < 41bp 0.473334889956608 0.846140559834691 0.33616135 0.69303465 prediction 0.692281119669383 Functional Gain - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25335532 chr4:25335533 synonymous SNV . 0 22 hPsi_associated_SNPs_22694 0 0 0 1 2 chromatin 0.438877393320001 0.440299343105844 0.3860693 0 hPsi_site_16418 iPseU_CNN:0.3860693;iRNA_PseU:0 16419 chr1 193050593 193050593 1 + G A STAD 193050592 + 193050572 193050612 41 ATACTCAACGCTAGTACAGTTGCTGCAGCAATGTGCATGGT ATACTCAACGCTAGTACAGTTACTGCAGCAATGTGCATGGT < 41bp 0.457911439974579 0.846138076008266 0.28385508 0.61191463 prediction 0.692276152016532 Functional Gain - TROVE2 ENSG00000116747 CDS Human protein_coding chr1:193050592 chr1:193050593 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_22695 0 0 1 0 2 Ribosome 0.439845801233896 0.440451515347311 0.22382926 0 hPsi_site_16419 iPseU_CNN:0.22382926;iRNA_PseU:0 16420 chr7 55467729 55467729 1 + C A UCEC 55467728 + 55467708 55467748 41 CTTTATGGACGGGCAGGTTATCTGTATGCCTTACTGTACCT CTTTATGGACGGGCAGGTTATATGTATGCCTTACTGTACCT < 41bp 0.483363144631395 0.846136596885594 0.26562244 0.44616184 prediction 0.692273193771188 Functional Gain - LANCL2 ENSG00000132434 CDS Human protein_coding chr7:55467728 chr7:55467729 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_22696 0 0 1 0 2 Ribosome 0.438735200588766 0.438717870237732 0 0 hPsi_site_16420 iPseU_CNN:0;iRNA_PseU:0 16421 chr11 123811176 123811176 1 + G A GBM 123811175 + 123811155 123811195 41 GTCACCCCCATGCTGAATCCTGCCATCTATACCCTGAGAAA GTCACCCCCATGCTGAATCCTACCATCTATACCCTGAGAAA < 41bp 0.524340331054374 0.870470226384569 0.28478032 0.49394828 prediction 0.69225979066039 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123811175 chr11:123811176 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22697 0 0 0 0 0 exosome 0.438718592998064 0.438718593490946 0 0 hPsi_site_16421 iPseU_CNN:0;iRNA_PseU:0 16422 chr19 35836548 35836548 1 + G A LUSC 35836547 + 35836527 35836567 41 AAGGCCCCCACTCCCTGGGATGCTACAATCCAATGATGGAA AAGGCCCCCACTCCCTGGGATACTACAATCCAATGATGGAA < 41bp 0.443425292182673 0.8461287577918 0.24475157 0.39438185 prediction 0.6922575155836 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35836547 chr19:35836548 nonsynonymous SNV 0.971 0 22 hPsi_associated_SNPs_22698 0 0 0 0 2 Endoplasmic reticulum 0.438718592987263 0.43871859299502 0 0 hPsi_site_16422 iPseU_CNN:0;iRNA_PseU:0 16423 chr12 26383959 26383959 1 + G A rs12313736 26383958 + 26383938 26383978 41 TACCAGGTCTTCTATGTGGGTGTCAGGATATGCTCCCTCAC TACCAGGTCTTCTATGTGGGTATCAGGATATGCTCCCTCAC < 41bp 0.466937539739796 0.846121292007974 0.45993412 0.81629306 prediction 0.692242584015947 Functional Gain - SSPN ENSG00000123096 CDS Human protein_coding chr12:26383958 chr12:26383959 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_22699 0 0 0 0 0 exosome 0.438718590987141 0.438718593037385 0.63258612 0 hPsi_site_16423 iPseU_CNN:0.63258612;iRNA_PseU:0 16424 chrX 100088206 100088206 1 + G A UCEC 100088205 + 100088185 100088225 41 AGGAATAGATGCACGAGGGATGGAGGCCCGAGCCATGGAGG AGGAATAGATGCACGAGGGATAGAGGCCCGAGCCATGGAGG < 41bp 0.450311551437492 0.846118230674885 0.3357154 0.76954454 prediction 0.69223646134977 Functional Gain - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088205 chrX:100088206 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_22700 0 0 0 0 1 Nucleus 0.438687635855115 0.438718413508699 0.53908908 0 hPsi_site_16424 iPseU_CNN:0.53908908;iRNA_PseU:0 16425 chr6 47681626 47681626 1 + G A UCEC 47681625 + 47681605 47681645 41 AAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTG AAATGCCAGCTCGGATTTGTTACAGTCAGTGAATTTGTTTG < 41bp 0.542729430789068 0.888838958362837 0.16963303 0.63584405 prediction 0.692219055147538 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47681625 chr6:47681626 synonymous SNV . 0 22 hPsi_associated_SNPs_22701 0 0 0 0 1 exosome 0.438765779538019 0.439006632773308 0.2716881 0 hPsi_site_16425 iPseU_CNN:0.2716881;iRNA_PseU:0 16426 chr20 30674471 30674471 1 + G A GBM 30674470 + 30674450 30674490 41 CAAGGTGGCAGTGAAGACGATGAAGCCAGGGAGCATGTCGG CAAGGTGGCAGTGAAGACGATAAAGCCAGGGAGCATGTCGG < 41bp 0.433967819924452 0.84610746098177 0.31312627 0.47452518 prediction 0.69221492196354 Functional Gain - HCK ENSG00000101336 CDS Human protein_coding chr20:30674470 chr20:30674471 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22702 0 0 0 0 1 Nucleus 0.438797986108265 0.43871760569843 0 0 hPsi_site_16426 iPseU_CNN:0;iRNA_PseU:0 16427 chr1 155103909 155103909 1 + G A GBM 155103908 + 155103888 155103928 41 GATCACTCTGTGGCAGACGCTGCCATGGAGCAGTACATACT GATCACTCTGTGGCAGACGCTACCATGGAGCAGTACATACT < 41bp 0.432616744208584 0.846104461589025 0.22285628 0.3835851 prediction 0.692208923178051 Functional Gain - EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155103908 chr1:155103909 nonsynonymous SNV 0.614 1 22 hPsi_associated_SNPs_22703 0 0 1 0 1 Endoplasmic reticulum 0.438841976817055 0.438584995335235 0 0 hPsi_site_16427 iPseU_CNN:0;iRNA_PseU:0 16428 chr17 47590128 47590128 1 + G A LAML 47590127 + 47590107 47590147 41 CCCAGCCAAGCGGGAGGAGGTGGAGAAGCTTCTCAACGGCT CCCAGCCAAGCGGGAGGAGGTAGAGAAGCTTCTCAACGGCT < 41bp 0.536440040439868 0.882544155620069 0.42873478 0.682891 prediction 0.692208230360401 Functional Gain - NGFR ENSG00000064300 CDS Human protein_coding chr17:47590127 chr17:47590128 synonymous SNV . 0 22 hPsi_associated_SNPs_22704 0 0 0 0 1 exosome 0.438718289215494 0.438714898980967 0.365782 0 hPsi_site_16428 iPseU_CNN:0.365782;iRNA_PseU:0 16429 chr9 35673992 35673992 1 + G A UCEC 35673991 + 35673971 35674011 41 CCCCAGCCCCTGGCTCCCTCTGTTGATCCCGGCCCCTGCTC CCCCAGCCCCTGGCTCCCTCTATTGATCCCGGCCCCTGCTC < 41bp 0.535537317241821 0.881631135962461 0.38469517 0.6940096 prediction 0.692187637441281 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35673991 chr9:35673992 synonymous SNV . 0 22 hPsi_associated_SNPs_22705 0 0 1 0 0 Endoplasmic reticulum 0.438532729849308 0.438386940288151 0.3880192 0 hPsi_site_16429 iPseU_CNN:0.3880192;iRNA_PseU:0 16430 chr21 47549198 47549198 1 + G A LUAD 47549197 + 47549177 47549217 41 CTTCCCCAGGACCATTCCCCTGATCCAACAGTTGCTAAACG CTTCCCCAGGACCATTCCCCTAATCCAACAGTTGCTAAACG < 41bp 0.477396256501349 0.846092701312561 0.26376218 0.33012587 prediction 0.692185402625122 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47549197 chr21:47549198 synonymous SNV . 0 22 hPsi_associated_SNPs_22706 0 0 0 0 1 Cytosol 0.438838688335799 0.438718078996565 0 0 hPsi_site_16430 iPseU_CNN:0;iRNA_PseU:0 16431 chr20 44429770 44429770 1 + C A BRCA 44429769 + 44429749 44429789 41 CCCAGATTGACCCATGAGCTTCCAGGAATAAAGGTCAGAGT CCCAGATTGACCCATGAGCTTACAGGAATAAAGGTCAGAGT < 41bp 0.504166437790605 0.850249647592752 0.31110948 0.41174507 prediction 0.692166419604293 Functional Gain - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44429769 chr20:44429770 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22707 0 0 1 0 2 cytosol 0.438721891376986 0.438686107707001 0 0 hPsi_site_16431 iPseU_CNN:0;iRNA_PseU:0 16432 chr5 140431700 140431700 1 + G A SKCM 140431699 + 140431679 140431719 41 CAACTTGACAATTACGGCGGTGGACGGCGGGTCCCCGCCTA CAACTTGACAATTACGGCGGTAGACGGCGGGTCCCCGCCTA < 41bp 0.45290218659908 0.84607623324968 0.38100076 0.69889647 prediction 0.692152466499359 Functional Gain - PCDHB1 ENSG00000171815 CDS Human protein_coding chr5:140431699 chr5:140431700 synonymous SNV . 0 22 hPsi_associated_SNPs_22708 0 0 0 0 0 unknown 0.438718592995101 0.43871859298041 0.39779294 0 hPsi_site_16432 iPseU_CNN:0.39779294;iRNA_PseU:0 16433 chr22 18029082 18029082 1 + G A KIRP 18029081 + 18029061 18029101 41 GCTTACTCTTCCCCTGTGGCTGCCCTCCCACCTCACCACCC GCTTACTCTTCCCCTGTGGCTACCCTCCCACCTCACCACCC < 41bp 0.541355528812569 0.887428164009881 0.23454055 0.64757985 prediction 0.692145270394624 Functional Gain - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18029081 chr22:18029082 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_22709 0 0 0 0 0 nucleoplasm 0.438718592996983 0.438718592995147 0.2951597 0 hPsi_site_16433 iPseU_CNN:0.2951597;iRNA_PseU:0 16434 chr9 33796705 33796705 1 + C A SKCM 33796704 + 33796684 33796724 41 CACCTGTGAGGAGAATTCTCTCCCCTACCAGGTGTCCCTGA CACCTGTGAGGAGAATTCTCTACCCTACCAGGTGTCCCTGA < 41bp 0.515205785394599 0.861275062592033 0.2945857 0.74961036 prediction 0.692138554394868 Functional Gain - PRSS3 ENSG00000010438 CDS Human protein_coding chr9:33796704 chr9:33796705 synonymous SNV . 0 22 hPsi_associated_SNPs_22710 0 0 0 0 2 Ribosome 0.438718625320515 0.438718123529438 0.49922072 0 hPsi_site_16434 iPseU_CNN:0.49922072;iRNA_PseU:0 16435 chr17 57889106 57889106 1 + G A UCEC 57889105 + 57889085 57889125 41 CCTTTTTGGACCTTCTTTGGTGCAACCCTAATTGGAAAAGC CCTTTTTGGACCTTCTTTGGTACAACCCTAATTGGAAAAGC < 41bp 0.451757087080198 0.846068578398756 0.37888032 0.8015567 prediction 0.692137156797511 Functional Gain - VMP1 ENSG00000062716 CDS Human protein_coding chr17:57889105 chr17:57889106 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22711 0 0 1 0 2 Nucleus 0.438718592995102 0.438718592995102 0.6031134 0 hPsi_site_16435 iPseU_CNN:0.6031134;iRNA_PseU:0 16436 chr16 2806515 2806515 1 + G A BLCA 2806514 + 2806494 2806534 41 GCGCCTGGAGGCTGCCCTGGTGAAGCGGCCTAATCCTGACA GCGCCTGGAGGCTGCCCTGGTAAAGCGGCCTAATCCTGACA < 41bp 0.450801285548763 0.846067338865583 0.45196363 0.75767094 prediction 0.692134677731167 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806514 chr16:2806515 synonymous SNV . 0 22 hPsi_associated_SNPs_22712 0 0 1 0 1 Nucleus 0.438718593317436 0.438718592995076 0.51534188 0 hPsi_site_16436 iPseU_CNN:0.51534188;iRNA_PseU:0 16437 chr11 59271645 59271645 1 + G A SKCM 59271644 + 59271624 59271664 41 TTTTGCTCTTGAGTTCTTGATGATTTCCAACAATGGCCTGG TTTTGCTCTTGAGTTCTTGATAATTTCCAACAATGGCCTGG < 41bp 0.466397254300557 0.846056462372905 0.15526304 0.27163243 prediction 0.69211292474581 Functional Gain - OR4D11 ENSG00000176200 CDS Human protein_coding chr11:59271644 chr11:59271645 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_22713 0 0 0 0 0 unknown 0.438754168739382 0.438716562273274 0 0 hPsi_site_16437 iPseU_CNN:0;iRNA_PseU:0 16438 chr2 197540921 197540921 1 + G A rs79496190 197540920 + 197540900 197540940 41 GAACAAAACTTATTGCTGGATGCAGCCCATGCCAGTATCAC GAACAAAACTTATTGCTGGATACAGCCCATGCCAGTATCAC < 41bp 0.46744232797819 0.846055978201711 0.30633146 0.6499404 prediction 0.692111956403423 Functional Gain - CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197540920 chr2:197540921 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_22714 0 0 0 0 2 Endoplasmic reticulum 0.438717028297677 0.438785147364503 0.2998808 0 hPsi_site_16438 iPseU_CNN:0.2998808;iRNA_PseU:0 16439 chr6 74191946 74191946 1 + G A BLCA 74191945 + 74191925 74191965 41 TCACTGCGCCCTGATAATGCTGACAGCCGGCTCACACTGCG TCACTGCGCCCTGATAATGCTAACAGCCGGCTCACACTGCG < 41bp 0.443462174073439 0.846050509900181 0.17528939 0.2622298 prediction 0.692101019800362 Functional Gain - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74191945 chr6:74191946 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_22715 0 0 1 0 1 Nucleus 0.438691964913279 0.437841035047456 0 0 hPsi_site_16439 iPseU_CNN:0;iRNA_PseU:0 16440 chr9 125437963 125437963 1 + G A SKCM 125437962 + 125437942 125437982 41 TTGTGATGTCAACCCTGTGCTGAAACTGTCCTGCTCCTCCA TTGTGATGTCAACCCTGTGCTAAAACTGTCCTGCTCCTCCA < 41bp 0.526028053128288 0.87207709215503 0.23524135 0.31498864 prediction 0.692098078053485 Functional Gain - OR1L3 ENSG00000171481 CDS Human protein_coding chr9:125437962 chr9:125437963 synonymous SNV . 0 22 hPsi_associated_SNPs_22716 0 0 0 0 0 unknown 0.43871859197566 0.439369656557795 0 0 hPsi_site_16440 iPseU_CNN:0;iRNA_PseU:0 16441 chr15 76448987 76448987 1 + G A UCEC 76448986 + 76448966 76449006 41 CTGTGGGAAGAGAGCAGCCGTGTGGCAGGTATTTTTGCTCA CTGTGGGAAGAGAGCAGCCGTATGGCAGGTATTTTTGCTCA < 41bp 0.445396446235977 0.846048779984323 0.18404981 0.23393649 prediction 0.692097559968646 Functional Gain - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76448986 chr15:76448987 synonymous SNV . 0 22 hPsi_associated_SNPs_22717 0 0 0 0 2 Nucleus 0.439022784546177 0.438757930474224 0 0 hPsi_site_16441 iPseU_CNN:0;iRNA_PseU:0 16442 chr22 38221146 38221146 1 + G A SKCM 38221145 + 38221125 38221165 41 ACGCGCTCATCCTGTGCTTCTGGTACGGCCGCTTCGCCTTC ACGCGCTCATCCTGTGCTTCTAGTACGGCCGCTTCGCCTTC < 41bp 0.521447309993224 0.8674936238845 0.2107198 0.32278234 prediction 0.692092627782551 Functional Gain - GALR3 ENSG00000128310 CDS Human protein_coding chr22:38221145 chr22:38221146 stopgain 0.999 0 22 hPsi_associated_SNPs_22718 0 0 0 0 0 nucleus 0.438625218799018 0.43882216455551 0 0 hPsi_site_16442 iPseU_CNN:0;iRNA_PseU:0 16443 chr1 248637416 248637416 1 + G A rs5014951 248637415 + 248637395 248637435 41 CCACATGATCATAGTGCTGCTGCTCTTCGGTGCTTCCTTCT CCACATGATCATAGTGCTGCTACTCTTCGGTGCTTCCTTCT < 41bp 0.52245137267537 0.868486441405658 0.19170672 0.49614218 prediction 0.692070137460576 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248637415 chr1:248637416 synonymous SNV . 0 22 hPsi_associated_SNPs_22719 0 0 0 0 0 unknown 0.438606938751764 0.426860191364279 0 0 hPsi_site_16443 iPseU_CNN:0;iRNA_PseU:0 16444 chrX 106893651 106893651 1 + G A rs5962870 106893650 + 106893630 106893670 41 CTAGCAACAAAGGCAACCCATGTGTGACCAGTTCTCCCCAA CTAGCAACAAAGGCAACCCATATGTGACCAGTTCTCCCCAA < 41bp 0.476567123728178 0.84603443929179 0.24003252 0.33687562 prediction 0.69206887858358 Functional Gain - PRPS1 ENSG00000147224 UTR3 Human protein_coding chrX:106893650 chrX:106893651 . . 0 22 hPsi_associated_SNPs_22720 0 0 1 3 0 Ribosome 0.438718604650661 0.43871847211411 0 0 hPsi_site_16444 iPseU_CNN:0;iRNA_PseU:0 16445 chr1 6694894 6694894 1 + G A rs547220664 6694893 + 6694873 6694913 41 GTCCACGCCTTTGGGTTGGGTGTGTCTGATGTCTTGCCAAG GTCCACGCCTTTGGGTTGGGTATGTCTGATGTCTTGCCAAG < 41bp 0.513374936309238 0.859407494661388 0.30693582 0.55603826 prediction 0.692065116704301 Functional Gain - DNAJC11;THAP3 ENSG00000007923;ENSG00000041988 UTR3 Human other chr1:6694893 chr1:6694894 . . 0 22 hPsi_associated_SNPs_22721 0 0 1 1 0 unknown 0.437199278108046 0.438516038110415 0.11207652 0 hPsi_site_16445 iPseU_CNN:0.11207652;iRNA_PseU:0 16446 chr17 41004723 41004723 1 + C A UCEC 41004722 + 41004702 41004742 41 TACTCGCACTACTTTGGGGGTCTTGCGGAAACGGTGCTGGT TACTCGCACTACTTTGGGGGTATTGCGGAAACGGTGCTGGT < 41bp 0.506607342886478 0.85261214901946 0.5372014 0.9049375 prediction 0.692009612265964 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41004722 chr17:41004723 nonsynonymous SNV 0.107 1 22 hPsi_associated_SNPs_22722 0 0 1 0 0 Cytosol 0.438717868081151 0.43871833213271 0.7354722 0 hPsi_site_16446 iPseU_CNN:0.7354722;iRNA_PseU:0 16447 chr14 101201194 101201194 1 + G A HNSC 101201193 + 101201173 101201213 41 CTTCCCCGAGAAGATCGACATGACCACCTTCAGCAAGGAGG CTTCCCCGAGAAGATCGACATAACCACCTTCAGCAAGGAGG < 41bp 0.462781593799012 0.84599622520233 0.19146368 0.35644275 prediction 0.69199245040466 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101201193 chr14:101201194 nonsynonymous SNV 0.975 2 22 hPsi_associated_SNPs_22723 0 0 1 0 0 Endoplasmic reticulum 0.438722150882215 0.438718594027604 0 0 hPsi_site_16447 iPseU_CNN:0;iRNA_PseU:0 16448 chr18 76754424 76754424 1 + G A BLCA 76754423 + 76754403 76754443 41 CATGGAGGACGACGCTGAGCTGAAGGACGCGGCCACCGACC CATGGAGGACGACGCTGAGCTAAAGGACGCGGCCACCGACC < 41bp 0.545317663060665 0.89131265682802 0.3756395 0.7090574 prediction 0.69198998753471 Functional Gain - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76754423 chr18:76754424 synonymous SNV . 0 22 hPsi_associated_SNPs_22724 0 0 0 0 0 exosome 0.438723340333752 0.438716438185747 0.4181148 0 hPsi_site_16448 iPseU_CNN:0.4181148;iRNA_PseU:0 16449 chr12 7023083 7023083 1 + G A LUSC 7023082 + 7023062 7023102 41 AAGACGCTGGCCTTCAGACCTGATCAGACTCCCAGGGGCAG AAGACGCTGGCCTTCAGACCTAATCAGACTCCCAGGGGCAG < 41bp 0.533465046236042 0.879459527203233 0.19536346 0.36984056 prediction 0.691988961934383 Functional Gain - LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7023082 chr12:7023083 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_22725 0 0 1 0 1 Cytosol 0.438714425331087 0.438718568753831 0 0 hPsi_site_16449 iPseU_CNN:0;iRNA_PseU:0 16450 chr15 43988498 43988498 1 + C A UCEC 43988497 + 43988477 43988517 41 GGAGGATCATACACGGGTGATCTCCATGGAGAAGGGTGGTA GGAGGATCATACACGGGTGATATCCATGGAGAAGGGTGGTA < 41bp 0.497432290526911 0.84598920980383 0.23586017 0.39127555 prediction 0.69197841960766 Functional Gain - CKMT1A ENSG00000223572 CDS Human protein_coding chr15:43988497 chr15:43988498 synonymous SNV . 0 22 hPsi_associated_SNPs_22726 0 0 0 0 1 exosome 0.438718592974173 0.438622824804973 0 0 hPsi_site_16450 iPseU_CNN:0;iRNA_PseU:0 16451 chr13 113783905 113783905 1 + C A GBM 113783904 + 113783884 113783924 41 ATACGAAGAGGCCCGCGAGGTCTTTGAGGACAGCGACAAGA ATACGAAGAGGCCCGCGAGGTATTTGAGGACAGCGACAAGA < 41bp 0.491857782547211 0.845976952270156 0.5146924 0.82189876 prediction 0.691953904540311 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113783904 chr13:113783905 synonymous SNV . 0 22 hPsi_associated_SNPs_22727 0 0 1 0 1 nucleus 0.438718466684292 0.4387181266425 0.61441272 0 hPsi_site_16451 iPseU_CNN:0.61441272;iRNA_PseU:0 Menarche (age at onset) 16452 chr2 233428968 233428968 1 + C A THCA 233428967 + 233428947 233428987 41 CTCTCTGCAGGTGGAGCAGTTCTGGAGGTTTTATAGCCACA CTCTCTGCAGGTGGAGCAGTTATGGAGGTTTTATAGCCACA < 41bp 0.497661577822859 0.845975685648611 0.24445081 0.36837906 prediction 0.691951371297221 Functional Gain - EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233428967 chr2:233428968 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22728 0 0 1 0 2 Ribosome 0.438714274758571 0.438539084328177 0 0 hPsi_site_16452 iPseU_CNN:0;iRNA_PseU:0 16453 chr14 24567839 24567839 1 + G A BLCA 24567838 + 24567818 24567858 41 CTTCAGGCCCTGGGAGATGGTGACTTTGTCAAGTGTCTGCA CTTCAGGCCCTGGGAGATGGTAACTTTGTCAAGTGTCTGCA < 41bp 0.443628015775976 0.845966749246222 0.22121605 0.35773906 prediction 0.691933498492443 Functional Gain - PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567838 chr14:24567839 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_22729 0 0 1 0 1 Endoplasmic reticulum 0.438718595190146 0.438718647442044 0 0 hPsi_site_16453 iPseU_CNN:0;iRNA_PseU:0 16454 chr22 29884869 29884869 1 + G A STAD 29884868 + 29884848 29884888 41 GAAGGTGAAGAGTGTCGGATTGGCTTTGGCCCAATTCCTTT GAAGGTGAAGAGTGTCGGATTAGCTTTGGCCCAATTCCTTT < 41bp 0.446815230352532 0.845964209930294 0.40447128 0.79324865 prediction 0.691928419860588 Functional Gain - NEFH ENSG00000100285 CDS Human protein_coding chr22:29884868 chr22:29884869 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22730 0 0 0 0 1 cytosol 0.438718707618654 0.438718422127457 0.5864973 0 hPsi_site_16454 iPseU_CNN:0.5864973;iRNA_PseU:0 16455 chr10 12129626 12129626 1 + G A LAML 12129625 + 12129605 12129645 41 GATGGGCTTTTTCCACGAGCTGCTGAAAATGTCGGCCTACA GATGGGCTTTTTCCACGAGCTACTGAAAATGTCGGCCTACA < 41bp 0.441391232790499 0.84596155816234 0.23278338 0.5332096 prediction 0.69192311632468 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12129625 chr10:12129626 synonymous SNV . 0 22 hPsi_associated_SNPs_22731 0 0 0 0 1 Endoplasmic reticulum 0.438718593670604 0.438718593162174 0.0664191999999999 0 hPsi_site_16455 iPseU_CNN:0.0664191999999999;iRNA_PseU:0 Obesity-related traits 16456 chr17 34954655 34954655 1 + G A HNSC 34954654 + 34954634 34954674 41 CAGTCCATGAAGGAGCGGAATGTGGACGATGGGCACATCAT CAGTCCATGAAGGAGCGGAATATGGACGATGGGCACATCAT < 41bp 0.547449352072661 0.893406302996705 0.3321243 0.6241843 prediction 0.691913901848088 Functional Gain - DHRS11 ENSG00000108272 CDS Human other chr17:34954654 chr17:34954655 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_22732 0 0 0 0 2 Cytosol 0.438300257430723 0.438228691927886 0.2483686 0 hPsi_site_16456 iPseU_CNN:0.2483686;iRNA_PseU:0 16457 chr16 84778970 84778970 1 + G A BLCA 84778969 + 84778949 84778989 41 CAAATACTTGAATCCTCGGGTGAGGGCACAGCTACCAACGG CAAATACTTGAATCCTCGGGTAAGGGCACAGCTACCAACGG < 41bp 0.535984107302915 0.88194045438371 0.26272506 0.54542667 prediction 0.691912694161588 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778969 chr16:84778970 nonsynonymous SNV 0.958 1 22 hPsi_associated_SNPs_22733 0 0 1 0 0 Cytosol 0.438718593997045 0.438718636990581 0.09085334 0 hPsi_site_16457 iPseU_CNN:0.09085334;iRNA_PseU:0 16458 chr16 89703004 89703004 1 + C A LUAD 89703003 + 89702983 89703023 41 TCGGCGTGGAGGGCGGCCACTCCATTGACAGCAGTTTGGGC TCGGCGTGGAGGGCGGCCACTACATTGACAGCAGTTTGGGC < 41bp 0.486923198449366 0.845951127874006 0.2714389 0.32254827 prediction 0.691902255748013 Functional Gain - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89703003 chr16:89703004 nonsynonymous SNV 0.977 4 22 hPsi_associated_SNPs_22734 0 0 0 0 2 Ribosome 0.438675041276076 0.438536291495079 0 0 hPsi_site_16458 iPseU_CNN:0;iRNA_PseU:0 16459 chr17 6940065 6940065 1 + G A rs3744396 6940064 + 6940044 6940084 41 AGGCCCGGTAGGCAGTGCCCTGAGCACGAAGTTCGGGCCCA AGGCCCGGTAGGCAGTGCCCTAAGCACGAAGTTCGGGCCCA < 41bp 0.546263341337988 0.892212582727584 0.24028912 0.41474313 prediction 0.691898482779191 Functional Gain - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6940064 chr17:6940065 synonymous SNV . 0 22 hPsi_associated_SNPs_22735 0 0 1 0 1 chromatin 0.438718482809068 0.438718593613294 0 0 hPsi_site_16459 iPseU_CNN:0;iRNA_PseU:0 16460 chr21 42807919 42807919 1 + G A SKCM 42807918 + 42807898 42807938 41 CTCGGGCAAGAGCTCCGTGTTGGAGGCACTGTCAGGAGTTG CTCGGGCAAGAGCTCCGTGTTAGAGGCACTGTCAGGAGTTG < 41bp 0.547569651223997 0.893518515266938 0.45394853 0.7530019 prediction 0.691897728085881 Functional Gain - MX1 ENSG00000157601 CDS Human protein_coding chr21:42807918 chr21:42807919 synonymous SNV . 0 22 hPsi_associated_SNPs_22736 0 0 0 0 1 exosome 0.438717713987428 0.438740591720983 0.5060038 0 hPsi_site_16460 iPseU_CNN:0.5060038;iRNA_PseU:0 16461 chr14 76045555 76045555 1 + G A BLCA 76045554 + 76045534 76045574 41 GGACCTCAGCGTGATCAAGGTGAGCAGGCGCCGTTGGGCCG GGACCTCAGCGTGATCAAGGTAAGCAGGCGCCGTTGGGCCG < 41bp 0.443490077297775 0.845936155328395 0.31470215 0.69060564 prediction 0.691872310656789 Functional Gain - FLVCR2 ENSG00000119686 CDS Human protein_coding chr14:76045554 chr14:76045555 synonymous SNV . 0 22 hPsi_associated_SNPs_22737 0 0 0 0 0 Cytosol 0.438717533620322 0.438712016610518 0.38121128 0 hPsi_site_16461 iPseU_CNN:0.38121128;iRNA_PseU:0 16462 chr1 147092324 147092324 1 + C A UCEC 147092323 + 147092303 147092343 41 CCAGACCATTCCTTCCCATGTCTCAGGGTCCAGGCAGCAAC CCAGACCATTCCTTCCCATGTATCAGGGTCCAGGCAGCAAC < 41bp 0.499300630918041 0.845932373694246 0.23755407 0.43204767 prediction 0.691864747388492 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147092323 chr1:147092324 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22738 0 0 1 0 0 Nucleus 0.438718592995102 0.438718592995102 0 0 hPsi_site_16462 iPseU_CNN:0;iRNA_PseU:0 16463 chr5 118824941 118824941 1 + G A ESCA 118824940 + 118824920 118824960 41 CACCTCTTGTCCTTTGGCTTTGTCACGAGAGTTGTGAGGAG CACCTCTTGTCCTTTGGCTTTATCACGAGAGTTGTGAGGAG < 41bp 0.44822292171411 0.845931093505217 0.32249236 0.37356547 prediction 0.691862187010434 Functional Gain - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118824940 chr5:118824941 nonsynonymous SNV 0.981 5 22 hPsi_associated_SNPs_22739 0 0 1 0 2 Cytosol 0.438720726036982 0.438710941306605 0 0 hPsi_site_16463 iPseU_CNN:0;iRNA_PseU:0 16464 chr11 62545759 62545759 1 + C A UCEC 62545758 + 62545738 62545778 41 CTCTCTGCACTGCTTCTAGTTCATGTCTCCTACCTGGATGG CTCTCTGCACTGCTTCTAGTTAATGTCTCCTACCTGGATGG < 41bp 0.501092162917113 0.847020818299639 0.35765687 0.6759745 prediction 0.691857310765053 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62545758 chr11:62545759 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_22740 0 0 1 0 2 Ribosome 0.438719504614698 0.438718573363372 0.351949 0 hPsi_site_16464 iPseU_CNN:0.351949;iRNA_PseU:0 16465 chr3 46307162 46307162 1 + C A UCEC 46307161 + 46307141 46307181 41 AGCTCTTCCTGAATTTATCTTCTATGAGACTGAAGAGTTGT AGCTCTTCCTGAATTTATCTTATATGAGACTGAAGAGTTGT < 41bp 0.499284747084117 0.845923439739179 0.31467962 0.43219924 prediction 0.691846879478359 Functional Gain - CCR3 ENSG00000183625 CDS Human protein_coding chr3:46307161 chr3:46307162 nonsynonymous SNV 0.539 4 22 hPsi_associated_SNPs_22741 0 0 0 0 0 exosome 0.438785515967655 0.438595160876274 0 0 hPsi_site_16465 iPseU_CNN:0;iRNA_PseU:0 16466 chr15 75111567 75111567 1 + C A OV 75111566 + 75111546 75111586 41 TGTGGGGCCCCTGCTTTTGGTCCCTGGAGGTTTCTTTGGGG TGTGGGGCCCCTGCTTTTGGTACCTGGAGGTTTCTTTGGGG < 41bp 0.483527094197384 0.845923105302519 0.20780635 0.45528948 prediction 0.691846210605039 Functional Gain - LMAN1L ENSG00000140506 CDS Human protein_coding chr15:75111566 chr15:75111567 synonymous SNV . 0 22 hPsi_associated_SNPs_22742 0 0 0 0 3 Endoplasmic reticulum 0.438718592995102 0.438718592995101 0 0 hPsi_site_16466 iPseU_CNN:0;iRNA_PseU:0 16467 chr15 90784671 90784671 1 + C A rs138559985 90784670 + 90784650 90784690 41 GCCTGAGCCTGCCCGCCAGCTCCCCCAGCGCCTGCTGCCGG GCCTGAGCCTGCCCGCCAGCTACCCCAGCGCCTGCTGCCGG < 41bp 0.491389100468693 0.845922376166239 0.24665192 0.66250515 prediction 0.691844752332477 Functional Gain - GDPGP1 ENSG00000183208 CDS Human protein_coding chr15:90784670 chr15:90784671 synonymous SNV . 0 22 hPsi_associated_SNPs_22743 0 0 0 0 0 nucleoplasm 0.438720184980787 0.438709586064776 0.3250103 0 hPsi_site_16467 iPseU_CNN:0.3250103;iRNA_PseU:0 16468 chr3 113507617 113507617 1 + G A CESC 113507616 + 113507596 113507636 41 CTTTGGCTGTGGAAAGACAGTGATATCACAGTCTCTATCCA CTTTGGCTGTGGAAAGACAGTAATATCACAGTCTCTATCCA < 41bp 0.539688692757336 0.885606256212129 0.26531112 0.29435316 prediction 0.691835126909586 Functional Gain - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113507616 chr3:113507617 synonymous SNV . 0 22 hPsi_associated_SNPs_22744 0 0 1 0 1 Ribosome 0.438718592995089 0.43871859299836 0 0 hPsi_site_16468 iPseU_CNN:0;iRNA_PseU:0 16469 chr13 25670880 25670880 1 + G A LUSC 25670879 + 25670859 25670899 41 TCTCGTAAAGAACGAGAAGCTGAACTTGGAGCTAGGGCAAA TCTCGTAAAGAACGAGAAGCTAAACTTGGAGCTAGGGCAAA < 41bp 0.470510719694855 0.84591173361065 0.22082102 0.31656438 prediction 0.691823467221299 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670879 chr13:25670880 nonsynonymous SNV 0.487 1 22 hPsi_associated_SNPs_22745 0 0 0 0 0 Cytosol 0.438718592601499 0.438718593001175 0 0 hPsi_site_16469 iPseU_CNN:0;iRNA_PseU:0 16470 chr2 158114816 158114816 1 + G A LUSC 158114815 + 158114795 158114835 41 TTACAGCAGCATAAAAGAGATGAAACCTCCCCTAAGGGGAC TTACAGCAGCATAAAAGAGATAAAACCTCCCCTAAGGGGAC < 41bp 0.519760777108501 0.865660452467154 0.26609725 0.2951036 prediction 0.691799350717306 Functional Gain - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158114815 chr2:158114816 nonsynonymous SNV 0.296 1 22 hPsi_associated_SNPs_22746 0 0 1 0 0 Exosome 0.438718595419809 0.43871859667689 0 0 hPsi_site_16470 iPseU_CNN:0;iRNA_PseU:0 16471 chr11 49974275 49974275 1 + G A BRCA 49974274 + 49974254 49974294 41 GGATGTATGACTCAAGTCTTTGGAGAACATTTTTTCAGAGG GGATGTATGACTCAAGTCTTTAGAGAACATTTTTTCAGAGG < 41bp 0.514648454540658 0.860545602549433 0.33396786 0.76685244 prediction 0.691794296017551 Functional Gain - OR4C13 ENSG00000258817 CDS Human protein_coding chr11:49974274 chr11:49974275 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_22747 0 0 0 0 0 unknown 0.439874864653621 0.438715181961298 0.53370488 0 hPsi_site_16471 iPseU_CNN:0.53370488;iRNA_PseU:0 16472 chr10 104233472 104233472 1 + C A HNSC 104233471 + 104233451 104233491 41 GTTGGCCGGCCCGGACCACCTCAGCCTGCTGTGCCTCTTCA GTTGGCCGGCCCGGACCACCTAAGCCTGCTGTGCCTCTTCA < 41bp 0.51248690949364 0.858378475513598 0.2896742 0.5226639 prediction 0.691783132039917 Functional Gain - MFSD13A ENSG00000138111 CDS Human protein_coding chr10:104233471 chr10:104233472 synonymous SNV . 0 22 hPsi_associated_SNPs_22748 0 0 0 0 1 Ribosome 0.438689968335434 0.438740979339648 0.0453277999999999 0 hPsi_site_16472 iPseU_CNN:0.0453277999999999;iRNA_PseU:0 16473 chr19 42351641 42351641 1 + G A SKCM 42351640 + 42351620 42351660 41 TGCGCCCGCTGCCGCAACCATGGTGTCACCGCCCATCTCAA TGCGCCCGCTGCCGCAACCATAGTGTCACCGCCCATCTCAA < 41bp 0.524031993680124 0.869917953098134 0.2612242 0.2863819 prediction 0.691771918836021 Functional Gain - DMRTC2 ENSG00000142025 CDS Human protein_coding chr19:42351640 chr19:42351641 nonsynonymous SNV 0.725 3 22 hPsi_associated_SNPs_22749 0 0 0 0 1 exosome 0.424781682681091 0.435477180884823 0 0 hPsi_site_16473 iPseU_CNN:0;iRNA_PseU:0 16474 chr8 142441175 142441175 1 + G A rs369463693 142441174 + 142441154 142441194 41 TTGGCTGGGCCTGGTCGTCATGTAGGTCAGGACCTTGGCTG TTGGCTGGGCCTGGTCGTCATATAGGTCAGGACCTTGGCTG < 41bp 0.520672382216491 0.866551109999638 0.4250539 0.69783884 prediction 0.691757455566295 Functional Gain - PTP4A3 ENSG00000184489 UTR3 Human protein_coding chr8:142441174 chr8:142441175 . . 0 22 hPsi_associated_SNPs_22750 0 0 1 0 0 Cytosol 0.438720698172841 0.438718596377009 0.39567768 0 hPsi_site_16474 iPseU_CNN:0.39567768;iRNA_PseU:0 16475 chr12 50481226 50481226 1 + G A UCEC 50481225 + 50481205 50481245 41 CGAGGATGGGGAAGGGACGGTGGCTTCCTGGGAGCTTCGGG CGAGGATGGGGAAGGGACGGTAGCTTCCTGGGAGCTTCGGG < 41bp 0.436835515130191 0.845872562611474 0.3368529 0.6500449 prediction 0.691745125222947 Functional Gain - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50481225 chr12:50481226 synonymous SNV . 0 22 hPsi_associated_SNPs_22751 0 0 1 0 2 Cytosol 0.438718594111557 0.438718591441818 0.3000898 0 hPsi_site_16475 iPseU_CNN:0.3000898;iRNA_PseU:0 16476 chr1 207867826 207867826 1 + G A SKCM 207867825 + 207867805 207867845 41 AGCAGAGGGAAAAAGGTGTTTGAGCTTGTGGGTGAGCCCTC AGCAGAGGGAAAAAGGTGTTTAAGCTTGTGGGTGAGCCCTC < 41bp 0.448879112045653 0.845870499488487 0.2663375 0.4102726 prediction 0.691740998976975 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207867825 chr1:207867826 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_22752 0 0 0 1 0 Endoplasmic reticulum 0.438708655323358 0.438718592044788 0 0 hPsi_site_16476 iPseU_CNN:0;iRNA_PseU:0 16477 chr6 27806760 27806760 1 + G A GBM 27806759 + 27806739 27806779 41 CCTGCTGCTGCCAGGGGAGCTGGCCAAGCACGCGGTGTCGG CCTGCTGCTGCCAGGGGAGCTAGCCAAGCACGCGGTGTCGG < 41bp 0.484743608705707 0.845858502431755 0.21916032 0.41857886 prediction 0.691717004863511 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806759 chr6:27806760 synonymous SNV . 0 22 hPsi_associated_SNPs_22753 0 0 1 0 2 Ribosome 0.438704824926052 0.438718308783321 0 0 hPsi_site_16477 iPseU_CNN:0;iRNA_PseU:0 16478 chr17 40997985 40997985 1 + G A PAAD 40997984 + 40997964 40998004 41 CTTCAAAATCATTTCTATGGTGGTTTGGCCAGCTCAGCCCT CTTCAAAATCATTTCTATGGTAGTTTGGCCAGCTCAGCCCT < 41bp 0.452977671161009 0.845856013473653 0.30237 0.47183123 prediction 0.691712026947305 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997984 chr17:40997985 nonsynonymous SNV 0.001 4 22 hPsi_associated_SNPs_22754 0 0 1 0 0 exosome 0.438718591510551 0.438718593515087 0 0 hPsi_site_16478 iPseU_CNN:0;iRNA_PseU:0 16479 chr20 33576017 33576017 1 + C A BLCA 33576016 + 33575996 33576036 41 GGAGGGCATCGACTGGGTCTTCATCGACTTCGGCCTTGACC GGAGGGCATCGACTGGGTCTTAATCGACTTCGGCCTTGACC < 41bp 0.498745651568239 0.845853056899595 0.34070885 0.68032813 prediction 0.69170611379919 Functional Gain - MYH7B ENSG00000078814 CDS Human protein_coding chr20:33576016 chr20:33576017 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22755 0 0 0 0 1 chromatin 0.438718605923764 0.438718592995051 0.36065626 0 hPsi_site_16479 iPseU_CNN:0.36065626;iRNA_PseU:0 16480 chr1 177245417 177245417 1 + G A BLCA 177245416 + 177245396 177245436 41 ATCACATGCAGCTCTGAGGGTGAGCTCGTCTGCAAGGAGAA ATCACATGCAGCTCTGAGGGTAAGCTCGTCTGCAAGGAGAA < 41bp 0.549701255550153 0.895554289680337 0.23797286 0.41170478 prediction 0.691706068260367 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177245416 chr1:177245417 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_22756 0 0 0 0 1 Nucleus 0.438185034659681 0.438718950432524 0 0 hPsi_site_16480 iPseU_CNN:0;iRNA_PseU:0 16481 chr7 102950891 102950891 1 + G A rs117074402 102950890 + 102950870 102950910 41 GTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGT GTTTGTGAATCATCCACTGTTACAGACATGCTACATGTTGT < 41bp 0.538349511529384 0.884199456006386 0.4712245 0.7335987 prediction 0.691699888954005 Functional Gain - PMPCB ENSG00000105819 CDS Human protein_coding chr7:102950890 chr7:102950891 nonsynonymous SNV 0.288 1 22 hPsi_associated_SNPs_22757 0 0 1 0 1 Ribosome 0.447314982751798 0.439390816554567 0.4671974 0 hPsi_site_16481 iPseU_CNN:0.4671974;iRNA_PseU:0 16482 chr20 21327108 21327108 1 + G A rs78456965 21327107 + 21327087 21327127 41 AAGAACAAATTTGATGTGGATGCAGCTGATGAGAAATTCCG AAGAACAAATTTGATGTGGATACAGCTGATGAGAAATTCCG < 41bp 0.451377607683126 0.845849848288358 0.36707717 0.47933125 prediction 0.691699696576715 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21327107 chr20:21327108 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22758 0 0 1 0 2 Cytosol 0.4384931745639 0.452083798740637 0 0 hPsi_site_16482 iPseU_CNN:0;iRNA_PseU:0 16483 chr5 79616059 79616059 1 + G A rs56226654 79616058 + 79616038 79616078 41 GCCAGCTCTGCTAAGTCAGCTGAGATGCCCACCATCTCCAA GCCAGCTCTGCTAAGTCAGCTAAGATGCCCACCATCTCCAA < 41bp 0.483726874159691 0.845847624783124 0.24670795 0.30578047 prediction 0.691695249566248 Functional Gain - SPZ1 ENSG00000164299 CDS Human protein_coding chr5:79616058 chr5:79616059 nonsynonymous SNV 0.024 1 22 hPsi_associated_SNPs_22759 0 1 0 0 0 unknown 0.438572404452222 0.438744071543937 0 0 hPsi_site_16483 iPseU_CNN:0;iRNA_PseU:0 16484 chr11 5372791 5372791 1 + G A SKCM 5372790 + 5372770 5372810 41 GCTTACTGGCTTCCCAGGCATGGAGAAGGCACATCACTGGA GCTTACTGGCTTCCCAGGCATAGAGAAGGCACATCACTGGA < 41bp 0.516081405086166 0.861926501410533 0.23414272 0.69297963 prediction 0.691690192648734 Functional Gain - OR51B6 ENSG00000176239 CDS Human protein_coding chr11:5372790 chr11:5372791 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_22760 0 0 0 0 0 unknown 0.438726723356051 0.436486560286638 0.38595926 0 hPsi_site_16484 iPseU_CNN:0.38595926;iRNA_PseU:0 16485 chrX 75649283 75649283 1 + G A CESC 75649282 + 75649262 75649302 41 TGAGGGATCGAGCACCTCCGTGCCGCCCACCCCTGGTGGGG TGAGGGATCGAGCACCTCCGTACCGCCCACCCCTGGTGGGG < 41bp 0.459026185964103 0.845840438842126 0.2766859 0.82990336 prediction 0.691680877684253 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75649282 chrX:75649283 synonymous SNV . 0 22 hPsi_associated_SNPs_22761 0 0 0 0 0 membrane 0.438718592490594 0.438718487043491 0.65980672 0 hPsi_site_16485 iPseU_CNN:0.65980672;iRNA_PseU:0 16486 chr12 104725367 104725367 1 + G A LUAD 104725366 + 104725346 104725386 41 CTCCTTTGGAATATGGTGCTTGTGGCCTTTCTGAGGAGAAA CTCCTTTGGAATATGGTGCTTATGGCCTTTCTGAGGAGAAA < 41bp 0.459737655110327 0.845834629894538 0.3149461 0.46901655 prediction 0.691669259789075 Functional Gain - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104725366 chr12:104725367 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_22762 0 0 1 0 1 Ribosome 0.438718602244015 0.438718636288134 0 0 hPsi_site_16486 iPseU_CNN:0;iRNA_PseU:0 16487 chr3 12856743 12856743 1 + G A UCEC 12856742 + 12856722 12856762 41 CAGCTCGCGGCCTGACCTGCTGCCCGATTTCCACTGCACCC CAGCTCGCGGCCTGACCTGCTACCCGATTTCCACTGCACCC < 41bp 0.431739255672276 0.845831408390182 0.3100464 0.76723135 prediction 0.691662816780363 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12856742 chr3:12856743 synonymous SNV . 0 22 hPsi_associated_SNPs_22763 0 0 0 0 0 chromatin 0.438794669972918 0.43877020834565 0.5344627 0 hPsi_site_16487 iPseU_CNN:0.5344627;iRNA_PseU:0 16488 chr2 136467071 136467071 1 + G A DLBC 136467070 + 136467050 136467090 41 TTCCTCGAACCACTTCACCATGCAGTTCCCAGCAGCTTCAA TTCCTCGAACCACTTCACCATACAGTTCCCAGCAGCTTCAA < 41bp 0.445347286301667 0.845827528416369 0.25012884 0.49891436 prediction 0.691655056832737 Functional Gain - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136467070 chr2:136467071 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_22764 0 0 1 0 2 Cytosol 0.438478994258963 0.438576086963776 0 0 hPsi_site_16488 iPseU_CNN:0;iRNA_PseU:0 16489 chr12 133197638 133197638 1 + G A STAD 133197637 + 133197617 133197657 41 GACTGTGACCTGGACCTGCCTGCATCGGAGTGCAACCCCAA GACTGTGACCTGGACCTGCCTACATCGGAGTGCAACCCCAA < 41bp 0.444031947721762 0.845819834380623 0.21845096 0.30753976 prediction 0.691639668761247 Functional Gain - P2RX2 ENSG00000187848 CDS Human protein_coding chr12:133197637 chr12:133197638 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_22765 0 0 0 0 1 exosome 0.438744753399325 0.438391759954737 0 0 hPsi_site_16489 iPseU_CNN:0;iRNA_PseU:0 16490 chr3 100438863 100438863 1 + G A LUAD 100438862 + 100438842 100438882 41 GATAGTTCTGACCTTTCCTTTGCAATTCAGTGCAGTAGGAT GATAGTTCTGACCTTTCCTTTACAATTCAGTGCAGTAGGAT < 41bp 0.54014515179717 0.885959142537236 0.31982455 0.6345117 prediction 0.691627981480132 Functional Gain - TFG ENSG00000114354 CDS Human protein_coding chr3:100438862 chr3:100438863 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22766 0 0 1 0 2 Cytosol 0.43871861403509 0.438718593013571 0.2690234 0 hPsi_site_16490 iPseU_CNN:0.2690234;iRNA_PseU:0 16491 chr7 150270329 150270329 1 + G A rs114365363 150270328 + 150270308 150270348 41 AGAGGGACAAATTTTCAATTTGTGAAACTCCAAAGCAGAAA AGAGGGACAAATTTTCAATTTATGAAACTCCAAAGCAGAAA < 41bp 0.505094745824631 0.850906702634836 0.2864586 0.40631428 prediction 0.691623913620409 Functional Gain - GIMAP4 ENSG00000133574 UTR3 Human protein_coding chr7:150270328 chr7:150270329 . . 0 22 hPsi_associated_SNPs_22767 0 0 0 0 0 exosome 0.438718592559329 0.438718592807769 0 0 hPsi_site_16491 iPseU_CNN:0;iRNA_PseU:0 16492 chr16 11001389 11001389 1 + C A UCEC 11001388 + 11001368 11001408 41 TACCCTACAGGAGGACCAGTTCCCATCCGCAGACGTGAGGA TACCCTACAGGAGGACCAGTTACCATCCGCAGACGTGAGGA < 41bp 0.503636441532551 0.849438922750588 0.7590791 0.92188716 prediction 0.691604962436073 Functional Gain - CIITA ENSG00000179583 CDS Human protein_coding chr16:11001388 chr16:11001389 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_22768 0 0 0 0 0 Nucleus 0.439145649638311 0.438493370954957 0.32561612 0 hPsi_site_16492 iPseU_CNN:0.32561612;iRNA_PseU:0 16493 chr19 7675990 7675990 1 + C A UCEC 7675989 + 7675969 7676009 41 CTCTCCGTACAGTTCTCCTGTCTTCACCTTCCGCCACCCGC CTCTCCGTACAGTTCTCCTGTATTCACCTTCCGCCACCCGC < 41bp 0.504390238997741 0.850188800392247 0.34851664 0.6622088 prediction 0.691597122789011 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7675989 chr19:7675990 synonymous SNV . 0 22 hPsi_associated_SNPs_22769 0 0 0 0 2 nucleus 0.438701601429814 0.43871859213534 0.3244176 0 hPsi_site_16493 iPseU_CNN:0.3244176;iRNA_PseU:0 16494 chr5 140433422 140433422 1 + G A SKCM 140433421 + 140433401 140433441 41 TGCCACTGGGGAGATAAAAATGGAGGCTGGCTCCAGTTTGC TGCCACTGGGGAGATAAAAATAGAGGCTGGCTCCAGTTTGC < 41bp 0.478990971048405 0.845793964727542 0.21463859 0.2980206 prediction 0.691587929455085 Functional Gain - PCDHB1 ENSG00000171815 CDS Human protein_coding chr5:140433421 chr5:140433422 nonsynonymous SNV 0.670 0 22 hPsi_associated_SNPs_22770 0 0 0 0 0 unknown 0.438716200657198 0.43875350958552 0 0 hPsi_site_16494 iPseU_CNN:0;iRNA_PseU:0 16495 chr14 68200537 68200537 1 + G A UCEC 68200536 + 68200516 68200556 41 AGCGCCTATGGAATGTCAGCTGTGAGCTTCTAGGAATCCGG AGCGCCTATGGAATGTCAGCTATGAGCTTCTAGGAATCCGG < 41bp 0.530382402913816 0.876172804597974 0.28463265 0.34130958 prediction 0.691580803368316 Functional Gain - RDH12 ENSG00000139988 CDS Human protein_coding chr14:68200536 chr14:68200537 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22771 0 0 0 0 1 exosome 0.438734020407973 0.438724184502174 0 0 hPsi_site_16495 iPseU_CNN:0;iRNA_PseU:0 16496 chr11 61110123 61110123 1 + G A LUAD 61110122 + 61110102 61110142 41 CAACGCGTCCCATGTGCCTGTGCAGCCCGGTGGGTAGCCTC CAACGCGTCCCATGTGCCTGTACAGCCCGGTGGGTAGCCTC < 41bp 0.439089741336598 0.845787001584514 0.5316793 0.7933241 prediction 0.691574003169027 Functional Gain - TKFC ENSG00000149476 CDS Human protein_coding chr11:61110122 chr11:61110123 synonymous SNV . 0 22 hPsi_associated_SNPs_22772 0 0 1 0 2 Cytosol 0.447285309340208 0.439090837219813 0.5232896 0 hPsi_site_16496 iPseU_CNN:0.5232896;iRNA_PseU:0 16497 chr2 223423561 223423561 1 + G A LAML 223423560 + 223423540 223423580 41 TTTGTTACCTACACATCTGTTGGCATCTGCGCTACAACCTT TTTGTTACCTACACATCTGTTAGCATCTGCGCTACAACCTT < 41bp 0.536458552477428 0.882237353055335 0.24990875 0.30620646 prediction 0.691557601155813 Functional Gain - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423560 chr2:223423561 nonsynonymous SNV 0.920 4 22 hPsi_associated_SNPs_22773 0 0 1 0 0 Ribosome 0.438718607918324 0.438718513466549 0 0 hPsi_site_16497 iPseU_CNN:0;iRNA_PseU:0 16498 chr19 14024056 14024056 1 + G A LUAD 14024055 + 14024035 14024075 41 GCGCTCTATCAGACAGCAATTGAAAGCGCCAGACAAGCTGG GCGCTCTATCAGACAGCAATTAAAAGCGCCAGACAAGCTGG < 41bp 0.44847883115492 0.845772722703203 0.23867717 0.24499127 prediction 0.691545445406407 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14024055 chr19:14024056 nonsynonymous SNV 0.078 0 22 hPsi_associated_SNPs_22774 0 0 0 0 1 chromatin 0.438717750967324 0.438718080469967 0 0 hPsi_site_16498 iPseU_CNN:0;iRNA_PseU:0 16499 chr2 98996717 98996717 1 + C A UCEC 98996716 + 98996696 98996736 41 GACCAGGGACCGGACTCTTTTCCTGATCGTTTCCGTGGAGC GACCAGGGACCGGACTCTTTTACTGATCGTTTCCGTGGAGC < 41bp 0.481634818235647 0.845768506596132 0.32931235 0.5224469 prediction 0.691537013192265 Functional Gain - CNGA3 ENSG00000144191 CDS Human protein_coding chr2:98996716 chr2:98996717 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_22775 0 0 0 0 1 nucleus 0.438718593904216 0.438720861579908 0.0448938000000001 0 hPsi_site_16499 iPseU_CNN:0.0448938000000001;iRNA_PseU:0 16500 chr4 514999 514999 1 + G A HNSC 514998 + 514978 515018 41 GAAGACGCTGAGCTTGTCCCTGAGTGCACAAGTGGCCCAGT GAAGACGCTGAGCTTGTCCCTAAGTGCACAAGTGGCCCAGT < 41bp 0.443320253543578 0.845768359841833 0.2208828 0.43735412 prediction 0.691536719683666 Functional Gain - PIGG ENSG00000174227 CDS Human protein_coding chr4:514998 chr4:514999 synonymous SNV . 0 22 hPsi_associated_SNPs_22776 0 0 1 1 3 Nucleus 0.438632149351018 0.438724932304042 0 0 hPsi_site_16500 iPseU_CNN:0;iRNA_PseU:0 16501 chr11 107462665 107462665 1 + G A rs374998568 107462664 + 107462644 107462684 41 GGTCGGCTGGGCTGTTGAGCTGCGCCTCCTCCAACTGCTGG GGTCGGCTGGGCTGTTGAGCTACGCCTCCTCCAACTGCTGG < 41bp 0.456780525598457 0.845768014623172 0.23720807 0.73450464 prediction 0.691536029246344 Functional Gain - ELMOD1 ENSG00000268467 CDS Human other chr11:107462664 chr11:107462665 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22777 0 0 0 0 1 exosome 0.438716267152302 0.438669230663889 0.46900928 0 hPsi_site_16501 iPseU_CNN:0.46900928;iRNA_PseU:0 16502 chr11 55322479 55322479 1 + G A SKCM 55322478 + 55322458 55322498 41 GTCATCAATCACTTTATGTGTGACTTGTACCCGTTACTGGA GTCATCAATCACTTTATGTGTAACTTGTACCCGTTACTGGA < 41bp 0.469867051510693 0.84575298160729 0.2194117 0.38444176 prediction 0.691505963214581 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322478 chr11:55322479 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22778 0 0 0 0 0 unknown 0.438718622518736 0.438757631789921 0 0 hPsi_site_16502 iPseU_CNN:0;iRNA_PseU:0 16503 chr10 21805345 21805345 1 + G A BRCA 21805344 + 21805324 21805364 41 GCTGGGAGGCTTGCAGAAGCTGGTGCGCCTGAATCGGATGC GCTGGGAGGCTTGCAGAAGCTAGTGCGCCTGAATCGGATGC < 41bp 0.521309956478836 0.867046125491967 0.24226618 0.52899617 prediction 0.691472338026263 Functional Gain - SKIDA1 ENSG00000180592 CDS Human protein_coding chr10:21805344 chr10:21805345 synonymous SNV . 0 22 hPsi_associated_SNPs_22779 0 0 0 0 0 Nucleus 0.438719557024041 0.438718587913675 0.05799234 0 hPsi_site_16503 iPseU_CNN:0.05799234;iRNA_PseU:0 16504 chr10 105133153 105133153 1 + G A UCEC 105133152 + 105133132 105133172 41 GAAGACCAGCCAGATGTCAGTGCCGTGTTGTCAGCCTACAA GAAGACCAGCCAGATGTCAGTACCGTGTTGTCAGCCTACAA < 41bp 0.44378076970897 0.845734694361008 0.29865867 0.5772159 prediction 0.691469388722016 Functional Gain - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105133152 chr10:105133153 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_22780 0 0 0 0 1 cytosol 0.438626135973745 0.437626480012273 0.1544318 0 hPsi_site_16504 iPseU_CNN:0.1544318;iRNA_PseU:0 16505 chr15 69677094 69677094 1 + G A UCEC 69677093 + 69677073 69677113 41 CTACTCCTGGCCCATGCTTGTGTACATGTGCACCAGCTGCG CTACTCCTGGCCCATGCTTGTATACATGTGCACCAGCTGCG < 41bp 0.43774931945432 0.845733488047301 0.2261461 0.42697975 prediction 0.691466976094603 Functional Gain - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69677093 chr15:69677094 synonymous SNV . 0 22 hPsi_associated_SNPs_22781 0 0 1 0 1 Cytosol 0.437616984317314 0.438295695616485 0 0 hPsi_site_16505 iPseU_CNN:0;iRNA_PseU:0 16506 chr8 42587207 42587207 1 + C A UCEC 42587206 + 42587186 42587226 41 GGGCTGTCTTTCCTAACAGTTCTTGTGTTCTATTTACCTTC GGGCTGTCTTTCCTAACAGTTATTGTGTTCTATTTACCTTC < 41bp 0.501721039324152 0.847450995109251 0.27079275 0.69270563 prediction 0.691459911570198 Functional Gain - CHRNB3 ENSG00000147432 CDS Human protein_coding chr8:42587206 chr8:42587207 nonsynonymous SNV 0.817 5 22 hPsi_associated_SNPs_22782 0 0 0 0 0 exosome 0.438727231879318 0.438692836241074 0.38541126 0 hPsi_site_16506 iPseU_CNN:0.38541126;iRNA_PseU:0 16507 chr19 54946739 54946739 1 + G A SKCM 54946738 + 54946718 54946758 41 TCAGGACTATGGTGCAGCCCTGCGGGGCCTGTGCGAAGACG TCAGGACTATGGTGCAGCCCTACGGGGCCTGTGCGAAGACG < 41bp 0.469719692525365 0.845728740937539 0.34682477 0.8711306 prediction 0.691457481875078 Functional Gain - TTYH1 ENSG00000167614 CDS Human protein_coding chr19:54946738 chr19:54946739 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22783 0 0 1 0 1 cytosol 0.438718545745232 0.438719225411839 0.7422612 0 hPsi_site_16507 iPseU_CNN:0.7422612;iRNA_PseU:0 16508 chr3 101576276 101576276 1 + G A rs550005587 101576275 + 101576255 101576295 41 GAACGAACAGCCAGTGCATTTGGTTCCCGATGGCCCTGTGG GAACGAACAGCCAGTGCATTTAGTTCCCGATGGCCCTGTGG < 41bp 0.444247180601729 0.845725675519503 0.30290708 0.6842856 prediction 0.691451351039005 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101576275 chr3:101576276 synonymous SNV . 0 22 hPsi_associated_SNPs_22784 0 0 1 0 1 Endoplasmic reticulum 0.438718483721453 0.438718593104492 0.3685712 0 hPsi_site_16508 iPseU_CNN:0.3685712;iRNA_PseU:0 16509 chr17 72345400 72345400 1 + C A LUAD 72345399 + 72345379 72345419 41 CGCTGACCTGCGGGGCGAGATCCAGCGACTCAAGCGCAAGA CGCTGACCTGCGGGGCGAGATACAGCGACTCAAGCGCAAGA < 41bp 0.486760856558397 0.845716538636587 0.2881781 0.34320515 prediction 0.691433077273174 Functional Gain - KIF19 ENSG00000196169 CDS Human protein_coding chr17:72345399 chr17:72345400 synonymous SNV . 0 22 hPsi_associated_SNPs_22785 0 0 0 0 2 exosome 0.438710796663091 0.438760229112388 0 0 hPsi_site_16509 iPseU_CNN:0;iRNA_PseU:0 16510 chr1 22974165 22974165 1 + G A CESC 22974164 + 22974144 22974184 41 CAACTCGGGCGGTGTGCTGCTGAGGTTGCAGGTGGGCGAGG CAACTCGGGCGGTGTGCTGCTAAGGTTGCAGGTGGGCGAGG < 41bp 0.449447695743608 0.845707130795114 0.2881633 0.38422683 prediction 0.691414261590227 Functional Gain - C1QC ENSG00000159189 CDS Human protein_coding chr1:22974164 chr1:22974165 synonymous SNV . 0 22 hPsi_associated_SNPs_22786 0 0 0 0 0 Cytosol 0.438718572990586 0.43874367590815 0 0 hPsi_site_16510 iPseU_CNN:0;iRNA_PseU:0 16511 chr17 72301399 72301399 1 + C A PAAD 72301398 + 72301378 72301418 41 GACCGAGCAGGGCATCGTCATCTCCTGCAACCGCAAGGCCA GACCGAGCAGGGCATCGTCATATCCTGCAACCGCAAGGCCA < 41bp 0.510589538427935 0.856295869522908 0.32853398 0.6248748 prediction 0.691412662189946 Functional Gain - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72301398 chr17:72301399 synonymous SNV . 0 22 hPsi_associated_SNPs_22787 0 0 0 1 1 exosome 0.438679201449517 0.438682440696943 0.2497496 0 hPsi_site_16511 iPseU_CNN:0.2497496;iRNA_PseU:0 16512 chr1 181019366 181019366 1 + G A PAAD 181019365 + 181019345 181019385 41 AGAATTGGCTGGAAGAAGAATGTATTGCCTGGCTAAAGAGA AGAATTGGCTGGAAGAAGAATATATTGCCTGGCTAAAGAGA < 41bp 0.452396915057796 0.845694357423944 0.25836927 0.3375836 prediction 0.691388714847889 Functional Gain - MR1 ENSG00000153029 CDS Human protein_coding chr1:181019365 chr1:181019366 nonsynonymous SNV 0.731 4 22 hPsi_associated_SNPs_22788 0 0 1 0 2 Endoplasmic reticulum 0.438718592839335 0.438718588958357 0 0 hPsi_site_16512 iPseU_CNN:0;iRNA_PseU:0 16513 chr6 44115180 44115180 1 + G A UCEC 44115179 + 44115159 44115199 41 CAAGGAGAACGTGCCTACCATGATCAACCCCAAGCCCTGTG CAAGGAGAACGTGCCTACCATAATCAACCCCAAGCCCTGTG < 41bp 0.433344361604772 0.84569337639415 0.2516148 0.6503131 prediction 0.691386752788301 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44115179 chr6:44115180 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22789 0 0 1 0 2 Ribosome 0.438720389118591 0.438716606233926 0.3006262 0 hPsi_site_16513 iPseU_CNN:0.3006262;iRNA_PseU:0 16514 chr7 73474266 73474266 1 + G A LUSC 73474265 + 73474245 73474285 41 GGAGTTGGCGTGGCTCCTGGTGTCGGTGTGGCTCCTGGAGT GGAGTTGGCGTGGCTCCTGGTATCGGTGTGGCTCCTGGAGT < 41bp 0.518394199384989 0.864086187927245 0.60025835 0.91604567 prediction 0.691383977084513 Functional Gain - ELN ENSG00000049540 CDS Human protein_coding chr7:73474265 chr7:73474266 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_22790 0 0 0 0 2 exosome 0.438690524315367 0.438718417626812 0.63157464 0 hPsi_site_16514 iPseU_CNN:0.63157464;iRNA_PseU:0 16515 chr11 55135474 55135474 1 + G A SKCM 55135473 + 55135453 55135493 41 AAAAATAAGAACAATGTGACTGAATTTATCCTCTTAGGGCT AAAAATAAGAACAATGTGACTAAATTTATCCTCTTAGGGCT < 41bp 0.493018912172546 0.845684306525594 0.25271356 0.5218227 prediction 0.691368613051188 Functional Gain - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55135473 chr11:55135474 nonsynonymous SNV 0.292 1 22 hPsi_associated_SNPs_22791 0 0 0 0 0 unknown 0.437724579616493 0.438720743310705 0.0436453999999999 0 hPsi_site_16515 iPseU_CNN:0.0436453999999999;iRNA_PseU:0 16516 chr19 49132646 49132646 1 + G A rs75629654 49132645 + 49132625 49132665 41 GCCTCCGCTGGGCACCCCGCTGCCCCCAGACTGGGTGACGC GCCTCCGCTGGGCACCCCGCTACCCCCAGACTGGGTGACGC < 41bp 0.539495489842271 0.885173657897626 0.33037835 0.789165 prediction 0.691356336110709 Functional Gain - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132645 chr19:49132646 synonymous SNV . 0 22 hPsi_associated_SNPs_22792 0 0 0 0 0 chromatin 0.43872003415049 0.438725421975596 0.57833 0 hPsi_site_16516 iPseU_CNN:0.57833;iRNA_PseU:0 16517 chr2 187511517 187511517 1 + G A BRCA 187511516 + 187511496 187511536 41 GCAGTCCCATCTCAAATCCTTGAAGGGCAGTGGGCTGCTCG GCAGTCCCATCTCAAATCCTTAAAGGGCAGTGGGCTGCTCG < 41bp 0.456285567001692 0.845677153729714 0.35341567 0.6593825 prediction 0.691354307459428 Functional Gain - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187511516 chr2:187511517 nonsynonymous SNV 0.781 1 22 hPsi_associated_SNPs_22793 0 0 1 0 1 Endoplasmic reticulum 0.438741187451731 0.438716395146427 0.318765 0 hPsi_site_16517 iPseU_CNN:0.318765;iRNA_PseU:0 16518 chr16 72821668 72821668 1 + G A BLCA 72821667 + 72821647 72821687 41 CGCCGCCGCCGGTGGGGACGTGAAGCACCATCTCTTGCAGG CGCCGCCGCCGGTGGGGACGTAAAGCACCATCTCTTGCAGG < 41bp 0.525470598143786 0.871146696321045 0.36713248 0.6397111 prediction 0.691352196354518 Functional Gain - ZFHX3 ENSG00000140836 CDS Human protein_coding chr16:72821667 chr16:72821668 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22794 0 0 0 0 0 nucleus 0.438964956869025 0.43872520859398 0.2794222 0 hPsi_site_16518 iPseU_CNN:0.2794222;iRNA_PseU:0 16519 chr19 58198932 58198932 1 + G A BLCA 58198931 + 58198911 58198951 41 ATTGTGGGAAATCTTTTAGCTGCAAATCGGAACTCATTCAA ATTGTGGGAAATCTTTTAGCTACAAATCGGAACTCATTCAA < 41bp 0.458303892207773 0.845675854518438 0.1484766 0.2266089 prediction 0.691351709036876 Functional Gain - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58198931 chr19:58198932 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_22795 0 0 1 0 0 Cytosol 0.438338448018868 0.438549634931022 0 0 hPsi_site_16519 iPseU_CNN:0;iRNA_PseU:0 16520 chr3 140397106 140397106 1 + G A UCEC 140397105 + 140397085 140397125 41 TGTGCGTTTGCTGTCCATGTTGTACATGGCAGAGATGTTGT TGTGCGTTTGCTGTCCATGTTATACATGGCAGAGATGTTGT < 41bp 0.460580434628013 0.845670613075557 0.41165036 0.7253334 prediction 0.691341226151113 Functional Gain - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140397105 chr3:140397106 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_22796 0 0 0 0 0 exosome 0.439849133543122 0.440424356758531 0.4506668 0 hPsi_site_16520 iPseU_CNN:0.4506668;iRNA_PseU:0 16521 chr1 171753487 171753487 1 + G A PRAD 171753486 + 171753466 171753506 41 AGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGC AGGAGCGACAGCAGTATGCCTAGCTGTGCAGCCAGCTGCGC < 41bp 0.449502725741851 0.845669135496893 0.27567396 0.66020447 prediction 0.691338270993787 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753486 chr1:171753487 stopgain 1.000 1 22 hPsi_associated_SNPs_22797 0 0 1 0 0 Ribosome 0.438715529908979 0.438722306460459 0.32040894 0 hPsi_site_16521 iPseU_CNN:0.32040894;iRNA_PseU:0 16522 chr1 158576852 158576852 1 + G A SARC 158576851 + 158576831 158576871 41 CCTCAGTCTTTTGGTCCTCTTGGTCTCCTTCTTCTTCATCA CCTCAGTCTTTTGGTCCTCTTAGTCTCCTTCTTCTTCATCA < 41bp 0.476720741671478 0.845668757878648 0.34239614 0.5409566 prediction 0.691337515757295 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576851 chr1:158576852 synonymous SNV . 0 22 hPsi_associated_SNPs_22798 0 0 0 0 0 unknown 0.4387184901682 0.438718592995273 0.0819132 0 hPsi_site_16522 iPseU_CNN:0.0819132;iRNA_PseU:0 16523 chr22 43870761 43870761 1 + G A rs111230140 43870760 + 43870740 43870780 41 GCCGGAGAACTATGAGAATGTGCAGTCGCTGCTGACCAACT GCCGGAGAACTATGAGAATGTACAGTCGCTGCTGACCAACT < 41bp 0.54984513732454 0.895513456588019 0.2370075 0.32449678 prediction 0.691336638526959 Functional Gain - MPPED1 ENSG00000186732 CDS Human protein_coding chr22:43870760 chr22:43870761 synonymous SNV . 0 22 hPsi_associated_SNPs_22799 0 0 0 0 1 nucleus 0.438718636667823 0.438579285363741 0 0 hPsi_site_16523 iPseU_CNN:0;iRNA_PseU:0 16524 chr17 45689945 45689945 1 + C A UCEC 45689944 + 45689924 45689964 41 CACGTGGAAGGAAAACAGATTCTCTCCGCTGATCTGAGGAG CACGTGGAAGGAAAACAGATTATCTCCGCTGATCTGAGGAG < 41bp 0.499741846968982 0.845662177132402 0.5580422 0.6780991 prediction 0.691324354264804 Functional Gain - NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45689944 chr17:45689945 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_22800 0 0 1 0 1 Nucleus 0.438775556100514 0.438719517151114 0.2401138 0 hPsi_site_16524 iPseU_CNN:0.2401138;iRNA_PseU:0 16525 chr1 248262934 248262934 1 + C A BRCA 248262933 + 248262913 248262953 41 AGATGGCGTACAACTTCCTGTCCGGCCAGAAAGGCATCTCC AGATGGCGTACAACTTCCTGTACGGCCAGAAAGGCATCTCC < 41bp 0.503850023976043 0.849511637763531 0.23804909 0.5712446 prediction 0.691323227574976 Functional Gain - OR2L13 ENSG00000196071 CDS Human protein_coding chr1:248262933 chr1:248262934 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_22801 0 0 0 0 0 Nucleus 0.438718592992637 0.4387186090948 0.1424892 0 hPsi_site_16525 iPseU_CNN:0.1424892;iRNA_PseU:0 16526 chr14 20528485 20528485 1 + G A UCEC 20528484 + 20528464 20528504 41 TGACCACAAGACCATCTCTGTGTGGGGCTGCGTGACCCAGA TGACCACAAGACCATCTCTGTATGGGGCTGCGTGACCCAGA < 41bp 0.527142104733928 0.872803540282349 0.30247813 0.37967187 prediction 0.691322871096841 Functional Gain - OR4L1 ENSG00000176246 CDS Human protein_coding chr14:20528484 chr14:20528485 synonymous SNV . 0 22 hPsi_associated_SNPs_22802 0 0 0 0 0 unknown 0.449538337286114 0.443515647147988 0 0 hPsi_site_16526 iPseU_CNN:0;iRNA_PseU:0 16527 chr14 78365469 78365469 1 + G A UCEC 78365468 + 78365448 78365488 41 CGTTCTGGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTA CGTTCTGGCTGTGAAGCAGCTATTCCCAGAGTTTGAGTTTA < 41bp 0.462401213612492 0.845652992456578 0.46805415 0.7390254 prediction 0.691305984913155 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78365468 chr14:78365469 synonymous SNV . 0 22 hPsi_associated_SNPs_22803 0 0 0 3 1 chromatin 0.43871782276356 0.438685242593307 0.4780508 0 hPsi_site_16527 iPseU_CNN:0.4780508;iRNA_PseU:0 16528 chr8 11405588 11405588 1 + C A BLCA 11405587 + 11405567 11405607 41 GACTACACCGCTATGAATGATCGGGACCTGCAGATGCTGAA GACTACACCGCTATGAATGATAGGGACCTGCAGATGCTGAA < 41bp 0.490272585374633 0.845652366885833 0.3635497 0.39479667 prediction 0.691304733771666 Functional Gain - BLK ENSG00000136573 CDS Human protein_coding chr8:11405587 chr8:11405588 synonymous SNV . 0 22 hPsi_associated_SNPs_22804 0 0 0 0 2 exosome 0.438456680551776 0.438731248813501 0 0 hPsi_site_16528 iPseU_CNN:0;iRNA_PseU:0 16529 chr17 79954545 79954545 1 + G A LIHC 79954544 + 79954524 79954564 41 CTCGGGTGGGGGACAGAGACTGGGGGGCCCTCCTGGGCCCA CTCGGGTGGGGGACAGAGACTAGGGGGCCCTCCTGGGCCCA < 41bp 0.442835863455556 0.845649082369069 0.3284842 0.39039832 prediction 0.691298164738138 Functional Gain - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79954544 chr17:79954545 synonymous SNV . 0 22 hPsi_associated_SNPs_22805 0 0 1 0 0 Ribosome 0.438718592994899 0.438717627779414 0 0 hPsi_site_16529 iPseU_CNN:0;iRNA_PseU:0 16530 chr5 169533045 169533045 1 + G A SARC 169533044 + 169533024 169533064 41 CGGCCAGGAGCCCCCCGAGATGAACCTCTACTATGAGAACT CGGCCAGGAGCCCCCCGAGATAAACCTCTACTATGAGAACT < 41bp 0.538198365545033 0.883844744996136 0.25022548 0.3189031 prediction 0.691292758902206 Functional Gain - FOXI1 ENSG00000168269 CDS Human protein_coding chr5:169533044 chr5:169533045 nonsynonymous SNV 0.498 3 22 hPsi_associated_SNPs_22806 0 0 0 0 0 exosome 0.438718592997333 0.438718592995101 0 0 hPsi_site_16530 iPseU_CNN:0;iRNA_PseU:0 16531 chr1 152648660 152648660 1 + G A ESCA 152648659 + 152648639 152648679 41 CCCAGCTCTGGGAGCTGCTGTGGTCCCAGCTCTGGGGGCTG CCCAGCTCTGGGAGCTGCTGTAGTCCCAGCTCTGGGGGCTG < 41bp 0.45828485893718 0.845645806823609 0.28694636 0.6787447 prediction 0.691291613647217 Functional Gain - LCE2C ENSG00000187180 CDS Human protein_coding chr1:152648659 chr1:152648660 nonsynonymous SNV 0.316 1 22 hPsi_associated_SNPs_22807 0 0 0 0 0 exosome 0.438718592994997 0.438718593006816 0.3574894 0 hPsi_site_16531 iPseU_CNN:0.3574894;iRNA_PseU:0 16532 chr9 115925417 115925417 1 + G A rs148428589 115925416 + 115925396 115925436 41 GTAGGGCCCAGGCATGGTCTTGTGTCTTAAGACAGCTGCTG GTAGGGCCCAGGCATGGTCTTATGTCTTAAGACAGCTGCTG < 41bp 0.482330729614135 0.845639597141396 0.31017166 0.39865792 prediction 0.691279194282792 Functional Gain - SLC31A2 ENSG00000119321;ENSG00000136867 UTR3 Human other chr9:115925416 chr9:115925417 . . 0 22 hPsi_associated_SNPs_22808 0 0 0 0 0 Ribosome 0.438701900260618 0.438707951044575 0 0 hPsi_site_16532 iPseU_CNN:0;iRNA_PseU:0 16533 chr14 70175498 70175498 1 + G A UCEC 70175497 + 70175477 70175517 41 TATATGGCAGTTCTGGTCACTGTGTGCCACCTGCTGACCCC TATATGGCAGTTCTGGTCACTATGTGCCACCTGCTGACCCC < 41bp 0.548766254232557 0.894399765922529 0.38146764 0.51229346 prediction 0.691267023379944 Functional Gain - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70175497 chr14:70175498 nonsynonymous SNV 0.836 0 22 hPsi_associated_SNPs_22809 0 0 1 0 0 Endoplasmic reticulum 0.438718568987666 0.438718588786637 0.02458692 0 hPsi_site_16533 iPseU_CNN:0.02458692;iRNA_PseU:0 16534 chr14 24631447 24631447 1 + G A BRCA 24631446 + 24631426 24631466 41 TTTCCCGGAGTGTGCTGGGATGATACAGCTAAGACCATGTT TTTCCCGGAGTGTGCTGGGATAATACAGCTAAGACCATGTT < 41bp 0.444720472258417 0.845633481958219 0.3243715 0.35951257 prediction 0.691266963916438 Functional Gain - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24631446 chr14:24631447 nonsynonymous SNV 0.788 3 22 hPsi_associated_SNPs_22810 0 0 1 0 2 Cytosol 0.438718595444206 0.438718591163597 0 0 hPsi_site_16534 iPseU_CNN:0;iRNA_PseU:0 16535 chr17 41143505 41143505 1 + G A LUSC 41143504 + 41143484 41143524 41 GCGCAGTGCAGACTCAGAATTGAAGGCCTTGGTGTGCATGG GCGCAGTGCAGACTCAGAATTAAAGGCCTTGGTGTGCATGG < 41bp 0.541689148918603 0.887315051078623 0.25665578 0.32548717 prediction 0.69125180432004 Functional Gain - RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41143504 chr17:41143505 synonymous SNV . 0 22 hPsi_associated_SNPs_22811 0 0 1 0 0 exosome 0.43854632645375 0.43869036335543 0 0 hPsi_site_16535 iPseU_CNN:0;iRNA_PseU:0 16536 chr3 52457215 52457215 1 + G A ESCA 52457214 + 52457194 52457234 41 AAGAGAATCCGGGCCTTTCTTGGACTGATTGGCCAGAACCT AAGAGAATCCGGGCCTTTCTTAGACTGATTGGCCAGAACCT < 41bp 0.460212569884676 0.84562548067613 0.26377425 0.36136842 prediction 0.691250961352259 Functional Gain - PHF7 ENSG00000010318 CDS Human protein_coding chr3:52457214 chr3:52457215 stopgain 0.955 0 22 hPsi_associated_SNPs_22812 0 0 0 0 0 cytosol 0.453466045114666 0.438705924542828 0 0 hPsi_site_16536 iPseU_CNN:0;iRNA_PseU:0 16537 chr5 170222296 170222296 1 + G A UCEC 170222295 + 170222275 170222315 41 AACAAGAGCTTCACTCTGGATGCCCGCCTCGTGGAGTTCCT AACAAGAGCTTCACTCTGGATACCCGCCTCGTGGAGTTCCT < 41bp 0.541213431596151 0.886833051002457 0.20117009 0.5111876 prediction 0.691239238812612 Functional Gain - GABRP ENSG00000094755 CDS Human protein_coding chr5:170222295 chr5:170222296 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_22813 0 0 0 0 1 Cytosol 0.436302956413458 0.437951059143514 0.0223751999999999 0 hPsi_site_16537 iPseU_CNN:0.0223751999999999;iRNA_PseU:0 16538 chr5 78415128 78415128 1 + G A COAD 78415127 + 78415107 78415147 41 CAGAGCTGGCTCAAACGTCATGCAGACCTTCACCTTCTATG CAGAGCTGGCTCAAACGTCATACAGACCTTCACCTTCTATG < 41bp 0.445628520259915 0.845617993918575 0.27082214 0.4733603 prediction 0.69123598783715 Functional Gain - BHMT ENSG00000145692 CDS Human protein_coding chr5:78415127 chr5:78415128 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22814 0 0 0 0 2 exosome 0.439916973937622 0.442778660468133 0 0 hPsi_site_16538 iPseU_CNN:0;iRNA_PseU:0 16539 chr1 150530542 150530542 1 + G A SKCM 150530541 + 150530521 150530561 41 TCGGTGCCCCCGGAGCGCTGTGGACATCTCCCCCGGCCCAA TCGGTGCCCCCGGAGCGCTGTAGACATCTCCCCCGGCCCAA < 41bp 0.432994125602642 0.845613725509006 0.34668666 0.6639951 prediction 0.691227451018011 Functional Gain - ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150530541 chr1:150530542 nonsynonymous SNV 0.791 2 22 hPsi_associated_SNPs_22815 0 0 1 0 1 Endoplasmic reticulum 0.438497048898544 0.43871934354775 0.3279902 0 hPsi_site_16539 iPseU_CNN:0.3279902;iRNA_PseU:0 16540 chr17 40275105 40275105 1 + G A ESCA 40275104 + 40275084 40275124 41 GGATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGG GGATGGCCAATGGCTGATGGTAACCGGACAGCAGCAACTGG < 41bp 0.53205890597312 0.877668388556977 0.17946684 0.3942996 prediction 0.691218965167714 Functional Gain - HSPB9 ENSG00000197723 CDS Human other chr17:40275104 chr17:40275105 synonymous SNV . 0 22 hPsi_associated_SNPs_22816 0 0 0 0 0 nucleoplasm 0.438718592995102 0.438718591728086 0 0 hPsi_site_16540 iPseU_CNN:0;iRNA_PseU:0 16541 chr19 6924826 6924826 1 + G A LUSC 6924825 + 6924805 6924845 41 CCTCCACCTGCACCTCTGCGTGTGTCTCCTCTTGGCGAAGA CCTCCACCTGCACCTCTGCGTATGTCTCCTCTTGGCGAAGA < 41bp 0.439703242915789 0.845607383851976 0.6172861 0.8235048 prediction 0.691214767703951 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6924825 chr19:6924826 synonymous SNV . 0 22 hPsi_associated_SNPs_22817 0 0 0 0 1 exosome 0.438718593078969 0.438718600152772 0.4124374 0 hPsi_site_16541 iPseU_CNN:0.4124374;iRNA_PseU:0 16542 chr17 33481646 33481646 1 + C A UCEC 33481645 + 33481625 33481665 41 GGAAGCAGGGGCTGAGAAGATCTTCCAGAACAATGGAGTAG GGAAGCAGGGGCTGAGAAGATATTCCAGAACAATGGAGTAG < 41bp 0.483179436298715 0.845596842238432 0.23502153 0.353921 prediction 0.691193684476863 Functional Gain - UNC45B ENSG00000141161 CDS Human protein_coding chr17:33481645 chr17:33481646 synonymous SNV . 0 22 hPsi_associated_SNPs_22818 0 0 0 0 1 Nucleus 0.438718500198182 0.438719300537527 0 0 hPsi_site_16542 iPseU_CNN:0;iRNA_PseU:0 16543 chr5 179260104 179260104 1 + C A PAAD 179260103 + 179260083 179260123 41 CCCCCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGC CCCCCGTCTCTCCAGAGAGTTACAGCACAGAGGAGAAGAGC < 41bp 0.512264721919711 0.857855537031128 0.34821856 0.70788777 prediction 0.691181630222834 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179260103 chr5:179260104 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_22819 0 0 1 0 1 Ribosome 0.438723075427412 0.438717735137633 0.41577554 0 hPsi_site_16543 iPseU_CNN:0.41577554;iRNA_PseU:0 16544 chr9 21440588 21440588 1 + G A CESC 21440587 + 21440567 21440607 41 TCTCTGGGCTGTGATCTCCCTGAGACCCACAGCCTGGATAA TCTCTGGGCTGTGATCTCCCTAAGACCCACAGCCTGGATAA < 41bp 0.477651451828831 0.84559005783891 0.21908286 0.32308868 prediction 0.69118011567782 Functional Gain - IFNA1 ENSG00000197919 CDS Human protein_coding chr9:21440587 chr9:21440588 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_22820 0 0 0 0 0 unknown 0.438709235975363 0.438718592986515 0 0 hPsi_site_16544 iPseU_CNN:0;iRNA_PseU:0 16545 chr17 42854609 42854609 1 + C A STAD 42854608 + 42854588 42854628 41 GGAGCTGTGGGCGCAAGGGATCTGGCTGGGTCCAGTGCAGT GGAGCTGTGGGCGCAAGGGATATGGCTGGGTCCAGTGCAGT < 41bp 0.496202109519933 0.845589509982251 0.23835415 0.40190998 prediction 0.691179019964501 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42854608 chr17:42854609 nonsynonymous SNV 0.057 1 22 hPsi_associated_SNPs_22821 0 0 1 0 2 chromatin 0.438718477306994 0.438718977294251 0 0 hPsi_site_16545 iPseU_CNN:0;iRNA_PseU:0 16546 chr8 144124585 144124585 1 + G A STAD 144124584 + 144124564 144124604 41 ACCCCAGGCTGAGCAGGAGCTGTACGCACAGGGCCCAGGGG ACCCCAGGCTGAGCAGGAGCTATACGCACAGGGCCCAGGGG < 41bp 0.461053863674159 0.845585280291482 0.76644707 0.9516649 prediction 0.691170560582963 Functional Gain - C8orf31 ENSG00000177335 CDS Human processed_transcript chr8:144124584 chr8:144124585 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22822 0 0 0 0 3 unknown 0.438718872681604 0.438723603738545 0.37043566 0 hPsi_site_16546 iPseU_CNN:0.37043566;iRNA_PseU:0 16547 chr18 33718796 33718796 1 + G A UCEC 33718795 + 33718775 33718815 41 TTAAACTTTGGAAATGGATTTGCTTTGGCTCTCTGCTTATC TTAAACTTTGGAAATGGATTTACTTTGGCTCTCTGCTTATC < 41bp 0.457117009706011 0.845576670515466 0.5955471 0.63651806 prediction 0.691153341030931 Functional Gain - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33718795 chr18:33718796 nonsynonymous SNV 0.921 0 22 hPsi_associated_SNPs_22823 0 0 1 1 2 Nucleus 0.446107446842413 0.435867134613235 0.08194192 0 hPsi_site_16547 iPseU_CNN:0.08194192;iRNA_PseU:0 16548 chr12 111884628 111884628 1 + G A STAD 111884627 + 111884607 111884647 41 GTGGTGCACACGGCTTGAGATGCCTGACAACCTTTACACCT GTGGTGCACACGGCTTGAGATACCTGACAACCTTTACACCT < 41bp 0.553576913334748 0.899142144460787 0.3938197 0.8376134 prediction 0.691130462252077 Functional Gain - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111884627 chr12:111884628 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_22824 0 0 1 0 1 Ribosome 0.438360342645678 0.438580765227513 0.6752268 0 hPsi_site_16548 iPseU_CNN:0.6752268;iRNA_PseU:0 16549 chr14 102808186 102808186 1 + G A UCEC 102808185 + 102808165 102808205 41 GGACTGTGCCTACAGGACTGTGCCCAAGCCAGGGCCTCAGC GGACTGTGCCTACAGGACTGTACCCAAGCCAGGGCCTCAGC < 41bp 0.455575430341136 0.845554566395901 0.24867398 0.750003 prediction 0.691109132791803 Functional Gain - ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102808185 chr14:102808186 synonymous SNV . 0 22 hPsi_associated_SNPs_22825 0 0 1 0 0 chromatin 0.438718593466328 0.438718811406497 0.500006 0 hPsi_site_16549 iPseU_CNN:0.500006;iRNA_PseU:0 16550 chr1 110171051 110171051 1 + C A UCEC 110171050 + 110171030 110171070 41 CAACCCTATTGGGGAGTCCGTCCTCCGAGAGATCTTCATCA CAACCCTATTGGGGAGTCCGTACTCCGAGAGATCTTCATCA < 41bp 0.502970493825316 0.848518433007582 0.2685439 0.8146913 prediction 0.691095878364531 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110171050 chr1:110171051 synonymous SNV . 0 22 hPsi_associated_SNPs_22826 0 0 1 1 2 Cytosol 0.438768204877696 0.43867237702301 0.6293826 0 hPsi_site_16550 iPseU_CNN:0.6293826;iRNA_PseU:0 16551 chr9 107457101 107457101 1 + G A SKCM 107457100 + 107457080 107457120 41 CATTGGCTGTGCTCTGCAGATGGTTGTGTCCCTTGGCTTGG CATTGGCTGTGCTCTGCAGATAGTTGTGTCCCTTGGCTTGG < 41bp 0.471350399543741 0.845545836838631 0.19598082 0.21873146 prediction 0.691091673677261 Functional Gain - OR13D1 ENSG00000179055 CDS Human protein_coding chr9:107457100 chr9:107457101 nonsynonymous SNV 0.584 2 22 hPsi_associated_SNPs_22827 0 0 0 0 0 unknown 0.438718610937857 0.438724276067833 0 0 hPsi_site_16551 iPseU_CNN:0;iRNA_PseU:0 16552 chr19 3613222 3613222 1 + C T UCEC 3613223 - 3613203 3613243 41 CGAGGGCGAGGGCGAGGCGGTGCTCATGGAGGAGGACCTGA CGAGGGCGAGGGCGAGGCGGTACTCATGGAGGAGGACCTGA < 41bp 0.545217796314033 0.890756824530701 0.21794611 0.8056827 prediction 0.691078056433336 Functional Gain - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3613223 chr19:3613222 synonymous SNV . 0 22 hPsi_associated_SNPs_22828 0 0 1 0 0 Ribosome 0.438718602407197 0.438718650001032 0.6113654 0 hPsi_site_16552 iPseU_CNN:0.6113654;iRNA_PseU:0 16553 chr22 37272040 37272040 1 + G A COAD 37272039 + 37272019 37272059 41 ACACCCCACTTCCAGCCTGATGCCTCCTTACTCCAGCCTGT ACACCCCACTTCCAGCCTGATACCTCCTTACTCCAGCCTGT < 41bp 0.45806527361968 0.845538660330923 0.17839819 0.48802006 prediction 0.691077320661846 Functional Gain - NCF4 ENSG00000100365 CDS Human protein_coding chr22:37272039 chr22:37272040 nonsynonymous SNV 0.021 1 22 hPsi_associated_SNPs_22829 0 0 0 0 1 exosome 0.438718589613744 0.438718590370369 0 0 hPsi_site_16553 iPseU_CNN:0;iRNA_PseU:0 16554 chr11 130066300 130066300 1 + G A COAD 130066299 + 130066279 130066319 41 CTGCTGGAGCCCGGCGTGCCTGCGGGCACCTGCCCCAAGGA CTGCTGGAGCCCGGCGTGCCTACGGGCACCTGCCCCAAGGA < 41bp 0.551759855545186 0.897297090385266 0.26999295 0.70871776 prediction 0.691074469680159 Functional Gain - ST14 ENSG00000149418 CDS Human protein_coding chr11:130066299 chr11:130066300 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_22830 0 0 0 0 2 Ribosome 0.43871934613605 0.438742003351495 0.41743552 0 hPsi_site_16554 iPseU_CNN:0.41743552;iRNA_PseU:0 16555 chr22 31658189 31658189 1 + C A SKCM 31658188 + 31658168 31658208 41 TGGGGACCGCATCCTGGAGATCAATGGGACCCCCGTCCGCA TGGGGACCGCATCCTGGAGATAAATGGGACCCCCGTCCGCA < 41bp 0.512646095889502 0.858173929901239 0.3506719 0.84936535 prediction 0.691055668023475 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31658188 chr22:31658189 synonymous SNV . 0 22 hPsi_associated_SNPs_22831 0 0 0 0 1 Cytosol 0.437762184789828 0.438737422239346 0.6987307 0 hPsi_site_16555 iPseU_CNN:0.6987307;iRNA_PseU:0 16556 chr19 17838339 17838339 1 + G A BLCA 17838338 + 17838318 17838358 41 TCCGCCCCCACCAGTGAGGCTGGGCTGAGCCTCCCGCTGCG TCCGCCCCCACCAGTGAGGCTAGGCTGAGCCTCCCGCTGCG < 41bp 0.534906431209019 0.880414091021133 0.27871832 0.56848294 prediction 0.691015319624228 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17838338 chr19:17838339 nonsynonymous SNV 0.735 2 22 hPsi_associated_SNPs_22832 0 0 1 0 0 Cytosol 0.438717670269578 0.438718585265098 0.13696588 0 hPsi_site_16556 iPseU_CNN:0.13696588;iRNA_PseU:0 16557 chr2 179320801 179320801 1 + G A LUSC 179320800 + 179320780 179320820 41 AGCAGAAAGGCAGTATTGTGTGTGGTCATGGAGAGCATCCG AGCAGAAAGGCAGTATTGTGTATGGTCATGGAGAGCATCCG < 41bp 0.53971622145009 0.885223505623461 0.37258068 0.45380092 prediction 0.691014568346741 Functional Gain - DFNB59 ENSG00000204311 CDS Human protein_coding chr2:179320800 chr2:179320801 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22833 0 0 0 0 2 exosome 0.4389874554104 0.438696717970666 0 0 hPsi_site_16557 iPseU_CNN:0;iRNA_PseU:0 16558 chr2 27505713 27505713 1 + G A SKCM 27505712 + 27505692 27505732 41 GATGTTCTCCAAACCAGTGGTGATCCTGCCCTGCCAACACA GATGTTCTCCAAACCAGTGGTAATCCTGCCCTGCCAACACA < 41bp 0.538356526273835 0.883848846120525 0.21512336 0.31172377 prediction 0.690984639693381 Functional Gain - TRIM54 ENSG00000138100 CDS Human protein_coding chr2:27505712 chr2:27505713 synonymous SNV . 0 22 hPsi_associated_SNPs_22834 0 0 0 0 1 Nucleus 0.438718593043197 0.438718585438364 0 0 hPsi_site_16558 iPseU_CNN:0;iRNA_PseU:0 16559 chr8 144681732 144681732 1 + G A LIHC 144681731 + 144681711 144681751 41 GGAGGAGGTGGGCCCAGCCCTGCCCCCTGCAGCGCCTCCGG GGAGGAGGTGGGCCCAGCCCTACCCCCTGCAGCGCCTCCGG < 41bp 0.489876230829139 0.845491986493795 0.23094377 0.3200587 prediction 0.690983972987591 Functional Gain - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144681731 chr8:144681732 synonymous SNV . 0 22 hPsi_associated_SNPs_22835 0 0 0 0 0 Ribosome 0.438718592995102 0.438718592995112 0 0 hPsi_site_16559 iPseU_CNN:0;iRNA_PseU:0 16560 chr6 35754883 35754883 1 + C A PAAD 35754882 + 35754862 35754902 41 GAGAAGGGGTCCGAGGGCAGTCTGTGTCAAACGCAGGTGGG GAGAAGGGGTCCGAGGGCAGTATGTGTCAAACGCAGGTGGG < 41bp 0.496520276984212 0.845476995844508 0.29000908 0.60071564 prediction 0.690953991689016 Functional Gain - CLPSL1 ENSG00000204140 CDS Human protein_coding chr6:35754882 chr6:35754883 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_22836 0 0 0 0 1 unknown 0.43871809554991 0.439441895300709 0.20143128 0 hPsi_site_16560 iPseU_CNN:0.20143128;iRNA_PseU:0 16561 chr6 13592062 13592062 1 + C A PRAD 13592061 + 13592041 13592081 41 GCAGGGCCGGCGAGTCGTGGTCATCACCCAGAACATCGATG GCAGGGCCGGCGAGTCGTGGTAATCACCCAGAACATCGATG < 41bp 0.514539010712957 0.860006726784401 0.21510759 0.5377305 prediction 0.69093543214289 Functional Gain - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13592061 chr6:13592062 synonymous SNV . 0 22 hPsi_associated_SNPs_22837 0 0 0 0 1 Nucleus 0.438718584868009 0.438718594505423 0.075461 0 hPsi_site_16561 iPseU_CNN:0.075461;iRNA_PseU:0 16562 chr3 134266255 134266255 1 + G A BRCA 134266254 + 134266234 134266274 41 AGACAGTGTGCTCTCCCAGTTGAATTTTACCCATACTAGTG AGACAGTGTGCTCTCCCAGTTAAATTTTACCCATACTAGTG < 41bp 0.439690087792738 0.845463891139288 0.2662722 0.6197111 prediction 0.690927782278576 Functional Gain - CEP63 ENSG00000182923 CDS Human protein_coding chr3:134266254 chr3:134266255 synonymous SNV . 0 22 hPsi_associated_SNPs_22838 0 0 0 0 2 nucleolus 0.438723789003535 0.438825402965164 0.2394222 0 hPsi_site_16562 iPseU_CNN:0.2394222;iRNA_PseU:0 16563 chr10 94836975 94836975 1 + G A SKCM 94836974 + 94836954 94836994 41 TGTGACTGGCAGCTTCTAAATGGACCTCCTACAATGAAAAC TGTGACTGGCAGCTTCTAAATAGACCTCCTACAATGAAAAC < 41bp 0.454965299799102 0.84546326931621 0.17500943 0.32283878 prediction 0.69092653863242 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94836974 chr10:94836975 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22839 0 0 0 0 0 Endoplasmic reticulum 0.438697747976341 0.438719178146476 0 0 hPsi_site_16563 iPseU_CNN:0;iRNA_PseU:0 16564 chr14 94568162 94568162 1 + G A rs185915352 94568161 + 94568141 94568181 41 AAATCTCCACTTCCCGCAGTTGTGGCTGTGGGGACTGTGCT AAATCTCCACTTCCCGCAGTTATGGCTGTGGGGACTGTGCT < 41bp 0.544878626446115 0.890338449497479 0.3089075 0.6401185 prediction 0.690919646102727 Functional Gain - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568161 chr14:94568162 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22840 0 0 1 0 1 Ribosome 0.438733946144344 0.43872501429743 0.280237 0 hPsi_site_16564 iPseU_CNN:0.280237;iRNA_PseU:0 16565 chr7 63538230 63538230 1 + G A COAD 63538229 + 63538209 63538249 41 GTCACAAAGCCTTTAGGTGTTGCTCAGACCTTACTAAACAT GTCACAAAGCCTTTAGGTGTTACTCAGACCTTACTAAACAT < 41bp 0.519159109128773 0.864617914332209 0.5568558 0.70661366 prediction 0.690917610406871 Functional Gain - ZNF727 ENSG00000257482 CDS Human other chr7:63538229 chr7:63538230 nonsynonymous SNV 0.145 0 22 hPsi_associated_SNPs_22841 0 0 0 0 0 exosome 0.438804420732185 0.438720581886155 0.29951572 0 hPsi_site_16565 iPseU_CNN:0.29951572;iRNA_PseU:0 16566 chr10 135125252 135125252 1 + G T LUAD 135125253 - 135125233 135125273 41 GCCTCCCCTTCTGACCGCTCTCCACTGTCCCCTGGGGCTTC GCCTCCCCTTCTGACCGCTCTACACTGTCCCCTGGGGCTTC < 41bp 0.501047702139895 0.846505871838521 0.28572643 0.7342228 prediction 0.690916339397251 Functional Gain - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135125253 chr10:135125252 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_22842 0 0 0 0 0 Ribosome 0.438718460522504 0.438718400456636 0.4684456 0 hPsi_site_16566 iPseU_CNN:0.4684456;iRNA_PseU:0 16567 chrX 153628167 153628167 1 + G A STAD 153628166 + 153628146 153628186 41 CTGGAGGCTGCCCGAATTTGTGCCAATAAGTACATGGTAAA CTGGAGGCTGCCCGAATTTGTACCAATAAGTACATGGTAAA < 41bp 0.446747697717616 0.845455208636789 0.21860242 0.6495462 prediction 0.690910417273578 Functional Gain - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628166 chrX:153628167 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_22843 0 0 1 0 0 Cytosol 0.438735332216069 0.43871965018693 0.2990924 0 hPsi_site_16567 iPseU_CNN:0.2990924;iRNA_PseU:0 16568 chr14 62203713 62203713 1 + G A COAD 62203712 + 62203692 62203732 41 ACTCAGCTATTCACCAAAGTTGAATCAGAAGATACAAGTAG ACTCAGCTATTCACCAAAGTTAAATCAGAAGATACAAGTAG < 41bp 0.469899362456345 0.845454021383572 0.30604452 0.5818064 prediction 0.690908042767143 Functional Gain - HIF1A ENSG00000100644 CDS Human protein_coding chr14:62203712 chr14:62203713 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22844 0 0 1 0 0 Cytosol 0.440990248798896 0.497319371937131 0.1636128 0 hPsi_site_16568 iPseU_CNN:0.1636128;iRNA_PseU:0 16569 chr13 58207256 58207256 1 + C A UCEC 58207255 + 58207235 58207275 41 CCGCGGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAGA CCGCGGCGACGGCACCAAGTTACCAGAACTGGTCATCCAGA < 41bp 0.503584316905364 0.849033534182178 0.43612555 0.74190384 prediction 0.690898434553628 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58207255 chr13:58207256 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22845 0 0 0 0 0 exosome 0.444032717654895 0.4387186458457 0.48380768 0 hPsi_site_16569 iPseU_CNN:0.48380768;iRNA_PseU:0 16570 chr12 26217544 26217544 1 + G A SKCM 26217543 + 26217523 26217563 41 TGGGGGCAGTATGCTAGTGATGTGCAGCTCATTCTACGACG TGGGGGCAGTATGCTAGTGATATGCAGCTCATTCTACGACG < 41bp 0.46182192713861 0.845445262446457 0.2765084 0.52362937 prediction 0.690890524892914 Functional Gain - RASSF8 ENSG00000123094 CDS Human protein_coding chr12:26217543 chr12:26217544 nonsynonymous SNV 0.443 3 22 hPsi_associated_SNPs_22846 0 0 1 0 0 Nucleus 0.438723279817214 0.438725508547484 0.04725874 0 hPsi_site_16570 iPseU_CNN:0.04725874;iRNA_PseU:0 16571 chr7 150069880 150069880 1 + G A MESO 150069879 + 150069859 150069899 41 CGGGCGAGCGGCCCTACGCCTGTCCCGACTGCGACCGCAGC CGGGCGAGCGGCCCTACGCCTATCCCGACTGCGACCGCAGC < 41bp 0.45943213313868 0.845444857150424 0.27279407 0.7707539 prediction 0.690889714300849 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069879 chr7:150069880 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_22847 0 0 1 0 0 Endoplasmic reticulum 0.44273338862899 0.441219422814706 0.5415078 0 hPsi_site_16571 iPseU_CNN:0.5415078;iRNA_PseU:0 16572 chr3 52456792 52456792 1 + C A GBM 52456791 + 52456771 52456811 41 TCTAGGAGGTGGTGCCTCATTCTGTGTGCTACATGCGGATC TCTAGGAGGTGGTGCCTCATTATGTGTGCTACATGCGGATC < 41bp 0.515261840636205 0.860705968298178 0.5222942 0.7135308 prediction 0.690888255323947 Functional Gain - PHF7 ENSG00000010318 CDS Human protein_coding chr3:52456791 chr3:52456792 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22848 0 0 0 0 1 cytosol 0.438888543133545 0.438672266820184 0.3824732 0 hPsi_site_16572 iPseU_CNN:0.3824732;iRNA_PseU:0 16573 chr11 123887115 123887115 1 + G A THCA 123887114 + 123887094 123887134 41 GGCCATTTTCTACACTGTGCTGACGCCCCTTCTCAACCCTG GGCCATTTTCTACACTGTGCTAACGCCCCTTCTCAACCCTG < 41bp 0.526329638437524 0.871772278780258 0.25267297 0.5789645 prediction 0.690885280685467 Functional Gain - OR10G4 ENSG00000254737 CDS Human protein_coding chr11:123887114 chr11:123887115 synonymous SNV . 0 22 hPsi_associated_SNPs_22849 0 0 0 0 0 unknown 0.438723727139743 0.438678264975563 0.157929 0 hPsi_site_16573 iPseU_CNN:0.157929;iRNA_PseU:0 16574 chr19 6926504 6926504 1 + C A LUSC 6926503 + 6926483 6926523 41 AGGTGGTGAATTACTTCAGCTCTCGCAACATCAAGATGCTG AGGTGGTGAATTACTTCAGCTATCGCAACATCAAGATGCTG < 41bp 0.506448682334998 0.85186254508296 0.32086357 0.44178587 prediction 0.690827725495926 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6926503 chr19:6926504 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_22850 0 0 0 0 0 exosome 0.438155751768597 0.438727987553763 0 0 hPsi_site_16574 iPseU_CNN:0;iRNA_PseU:0 16575 chr1 110551679 110551679 1 + G A LUAD 110551678 + 110551658 110551698 41 AATCCAGTTTGCTGATGACATGCAGGAGTTCACCAAATTCC AATCCAGTTTGCTGATGACATACAGGAGTTCACCAAATTCC < 41bp 0.458496898235431 0.845405378800355 0.23326287 0.30559328 prediction 0.69081075760071 Functional Gain - AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110551678 chr1:110551679 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22851 0 0 1 0 2 Ribosome 0.437770556674503 0.438735046407201 0 0 hPsi_site_16575 iPseU_CNN:0;iRNA_PseU:0 16576 chr5 157178495 157178495 1 + C A LUSC 157178494 + 157178474 157178514 41 TTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCTTGTTG TTTCAAGGGACTTCGGGGCGTATGTACAGGCTTCCTTGTTG < 41bp 0.507854586019678 0.853245793665345 0.20375064 0.34257907 prediction 0.690782415291334 Functional Gain - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157178494 chr5:157178495 synonymous SNV . 0 22 hPsi_associated_SNPs_22852 0 0 1 0 2 Ribosome 0.438718593304475 0.438869172611232 0 0 hPsi_site_16576 iPseU_CNN:0;iRNA_PseU:0 16577 chr13 46276525 46276525 1 + G A rs149308273 46276524 + 46276504 46276544 41 AAAAACACCATATTGTTTTGTGATGTCACCTCTGGAATGTT AAAAACACCATATTGTTTTGTAATGTCACCTCTGGAATGTT < 41bp 0.482517595655999 0.845373269623076 0.28833205 0.53716105 prediction 0.690746539246153 Functional Gain - SPERT ENSG00000174015 UTR5 Human protein_coding chr13:46276524 chr13:46276525 . . 0 22 hPsi_associated_SNPs_22853 0 0 0 0 1 exosome 0.443605315742958 0.438592979057466 0.0743221000000001 0 hPsi_site_16577 iPseU_CNN:0.0743221000000001;iRNA_PseU:0 16578 chr10 126172807 126172807 1 + C A COAD 126172806 + 126172786 126172826 41 TCAGAGGCTGGGATTTGACATCTCTGAGCAGGAGGTGACCG TCAGAGGCTGGGATTTGACATATCTGAGCAGGAGGTGACCG < 41bp 0.484004094238745 0.845372015461843 0.2633122 0.47213435 prediction 0.690744030923687 Functional Gain - LHPP ENSG00000107902 CDS Human protein_coding chr10:126172806 chr10:126172807 synonymous SNV . 0 22 hPsi_associated_SNPs_22854 0 0 1 0 2 Ribosome 0.43872620407092 0.438759246043806 0 0 hPsi_site_16578 iPseU_CNN:0;iRNA_PseU:0 16579 chrX 150912290 150912290 1 + G A LUAD 150912289 + 150912269 150912309 41 CTGCCAGCCAAGCTCAGGGCTGAGATAGCCATCAATGTCCA CTGCCAGCCAAGCTCAGGGCTAAGATAGCCATCAATGTCCA < 41bp 0.44596031369711 0.845369638625327 0.28570813 0.3346239 prediction 0.690739277250653 Functional Gain - CNGA2 ENSG00000183862 CDS Human protein_coding chrX:150912289 chrX:150912290 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_22855 0 0 0 0 0 unknown 0.439073378452649 0.438717316744139 0 0 hPsi_site_16579 iPseU_CNN:0;iRNA_PseU:0 16580 chr7 127231273 127231273 1 + G A UCEC 127231272 + 127231252 127231292 41 TCCTTTTCCCCACAGTGGTATGTCCAGGCCACCTGTGCCAC TCCTTTTCCCCACAGTGGTATATCCAGGCCACCTGTGCCAC < 41bp 0.454204090629407 0.845366909323136 0.51775 0.6731528 prediction 0.690733818646272 Functional Gain - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127231272 chr7:127231273 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_22856 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0.3108056 0 hPsi_site_16580 iPseU_CNN:0.3108056;iRNA_PseU:0 16581 chr18 9396396 9396396 1 + G A LUAD 9396395 + 9396375 9396415 41 CACAGAAGGAGATACTCAGTTGAATTGGAACATCGTTTCTT CACAGAAGGAGATACTCAGTTAAATTGGAACATCGTTTCTT < 41bp 0.538747015905897 0.884110994044054 0.473158 0.92629135 prediction 0.690727956276314 Functional Gain - TWSG1 ENSG00000128791 CDS Human protein_coding chr18:9396395 chr18:9396396 synonymous SNV . 0 22 hPsi_associated_SNPs_22857 0 0 1 0 0 Ribosome 0.439864446537003 0.438718490599181 0.8525827 0 hPsi_site_16581 iPseU_CNN:0.8525827;iRNA_PseU:0 16582 chr6 43612865 43612865 1 + G A LGG 43612864 + 43612844 43612884 41 CGACAGCCTCCTGCTGTCTCTGGAGCTGGCGTCCGGCAGTG CGACAGCCTCCTGCTGTCTCTAGAGCTGGCGTCCGGCAGTG < 41bp 0.526156205583012 0.871511324304851 0.18528166 0.41694474 prediction 0.690710237443678 Functional Gain - RSPH9 ENSG00000172426 CDS Human protein_coding chr6:43612864 chr6:43612865 synonymous SNV . 0 22 hPsi_associated_SNPs_22858 0 0 1 0 0 chromatin 0.438718588608526 0.438854945887762 0 0 hPsi_site_16582 iPseU_CNN:0;iRNA_PseU:0 16583 chr3 122003353 122003353 1 + G A LAML 122003352 + 122003332 122003372 41 CCAGCTTTGGCTTGCTGGCGTGCATCTTCTTCAACAAGATC CCAGCTTTGGCTTGCTGGCGTACATCTTCTTCAACAAGATC < 41bp 0.539153071817643 0.884504285167167 0.28821898 0.40923584 prediction 0.690702426699048 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:122003352 chr3:122003353 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_22859 0 0 0 0 0 exosome 0.438718623765679 0.438718524060203 0 0 hPsi_site_16583 iPseU_CNN:0;iRNA_PseU:0 16584 chr8 82196159 82196159 1 + G A SKCM 82196158 + 82196138 82196178 41 GTTCAGCATCAGGAGTGGGATGGGAAGGAAAGCACAATAAC GTTCAGCATCAGGAGTGGGATAGGAAGGAAAGCACAATAAC < 41bp 0.454186063487787 0.845350514892321 0.28694123 0.25846308 prediction 0.690701029784641 Functional Gain - FABP5 ENSG00000164687 CDS Human protein_coding chr8:82196158 chr8:82196159 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22860 0 0 0 0 2 Cytosol 0.438306358371908 0.438716754223221 0 0 hPsi_site_16584 iPseU_CNN:0;iRNA_PseU:0 16585 chr19 17983416 17983416 1 + G A SKCM 17983415 + 17983395 17983435 41 GATGTGCCTGGGCCAGCTTCTGAACTCGGTCCTCACCGCCC GATGTGCCTGGGCCAGCTTCTAAACTCGGTCCTCACCGCCC < 41bp 0.442719316656925 0.845348958037007 0.2520427 0.27392364 prediction 0.690697916074015 Functional Gain - SLC5A5 ENSG00000105641 CDS Human protein_coding chr19:17983415 chr19:17983416 synonymous SNV . 0 22 hPsi_associated_SNPs_22861 0 0 0 0 1 Nucleus 0.438688757929138 0.438718592995543 0 0 hPsi_site_16585 iPseU_CNN:0;iRNA_PseU:0 16586 chrX 27766027 27766027 1 + G A ESCA 27766026 + 27766006 27766046 41 TATAAGTTCCTCACTTCAGGTGAAGATGCTGTTGTCTTCAC TATAAGTTCCTCACTTCAGGTAAAGATGCTGTTGTCTTCAC < 41bp 0.467267376466612 0.845337950590685 0.15133232 0.25909388 prediction 0.690675901181371 Functional Gain - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27766026 chrX:27766027 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_22862 0 0 0 0 0 exosome 0.439116113222837 0.43881965298194 0 0 hPsi_site_16586 iPseU_CNN:0;iRNA_PseU:0 16587 chr4 27010455 27010455 1 + C A UCEC 27010454 + 27010434 27010474 41 CTGGCAACAAATTGAGAAGATCTGTGGCTTTCAGATAGCCC CTGGCAACAAATTGAGAAGATATGTGGCTTTCAGATAGCCC < 41bp 0.501897254795774 0.847234872363035 0.36495852 0.4119718 prediction 0.690675235134523 Functional Gain - STIM2 ENSG00000109689 CDS Human protein_coding chr4:27010454 chr4:27010455 synonymous SNV . 0 22 hPsi_associated_SNPs_22863 0 0 0 0 1 Nucleus 0.438715029693021 0.438718695140814 0 0 hPsi_site_16587 iPseU_CNN:0;iRNA_PseU:0 16588 chr16 66919084 66919084 1 + G A LAML 66919083 + 66919063 66919103 41 TGTCCAAGAGGACAATGGCATGTGGTCTTGTCTGCCCCTTA TGTCCAAGAGGACAATGGCATATGGTCTTGTCTGCCCCTTA < 41bp 0.537710263223891 0.883037256329948 0.32330656 0.3334617 prediction 0.690653986212114 Functional Gain - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66919083 chr16:66919084 nonsynonymous SNV 0.846 1 22 hPsi_associated_SNPs_22864 0 0 1 0 0 nucleolus 0.438718592975266 0.438718592993801 0 0 hPsi_site_16588 iPseU_CNN:0;iRNA_PseU:0 16589 chr13 114322124 114322124 1 + C A SKCM 114322123 + 114322103 114322143 41 TAAGGAGGGGCCTGTGGAGATCCAGGACGGGCTCTTCCAGC TAAGGAGGGGCCTGTGGAGATACAGGACGGGCTCTTCCAGC < 41bp 0.498097168060988 0.845315565763135 0.29180646 0.43302983 prediction 0.69063113152627 Functional Gain - GRK1 ENSG00000185974 CDS Human protein_coding chr13:114322123 chr13:114322124 synonymous SNV . 0 22 hPsi_associated_SNPs_22865 0 0 0 0 0 exosome 0.438192577073108 0.438718500571458 0 0 hPsi_site_16589 iPseU_CNN:0;iRNA_PseU:0 16590 chr19 9204210 9204210 1 + G A rs570110447 9204209 + 9204189 9204229 41 AGGCCATCTCTTATCCCTGCTGCCTGATCCAGATGTACTTC AGGCCATCTCTTATCCCTGCTACCTGATCCAGATGTACTTC < 41bp 0.466629704471536 0.845308186886925 0.17225084 0.30784747 prediction 0.69061637377385 Functional Gain - OR1M1 ENSG00000170929 CDS Human protein_coding chr19:9204209 chr19:9204210 nonsynonymous SNV 0.181 4 22 hPsi_associated_SNPs_22866 0 0 0 0 0 unknown 0.438853249974722 0.438679011259932 0 0 hPsi_site_16590 iPseU_CNN:0;iRNA_PseU:0 16591 chr17 1630992 1630992 1 + G A rs9912287 1630991 + 1630971 1631011 41 GCAGCAGCTGGGCGCGGTGCTGAAGGACATCACCCCTGAGG GCAGCAGCTGGGCGCGGTGCTAAAGGACATCACCCCTGAGG < 41bp 0.459217227911174 0.845301137336022 0.26661623 0.7285931 prediction 0.690602274672045 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1630991 chr17:1630992 synonymous SNV . 0 22 hPsi_associated_SNPs_22867 1 0 1 0 0 Endoplasmic reticulum 0.43877990572302 0.438722233059287 0.4571862 0 hPsi_site_16591 iPseU_CNN:0.4571862;iRNA_PseU:0 16592 chr16 1129384 1129384 1 + G A rs35162372 1129383 + 1129363 1129403 41 CCTGTCTCTGTGCATGTCGCTGCCGCTCCTGGTGTTCGCGG CCTGTCTCTGTGCATGTCGCTACCGCTCCTGGTGTTCGCGG < 41bp 0.477738323093725 0.845297220818418 0.3723035 0.737695 prediction 0.690594441636835 Functional Gain - SSTR5 ENSG00000162009 CDS Human protein_coding chr16:1129383 chr16:1129384 synonymous SNV . 0 22 hPsi_associated_SNPs_22868 0 0 0 0 0 exosome 0.438715709241498 0.439005067670941 0.47539 0 hPsi_site_16592 iPseU_CNN:0.47539;iRNA_PseU:0 16593 chr2 86426566 86426566 1 + G A rs41291149 86426565 + 86426545 86426585 41 GCTTTCCCTTCATTCTCTTTTGCTCTTGTGCTTTTAAACCC GCTTTCCCTTCATTCTCTTTTACTCTTGTGCTTTTAAACCC < 41bp 0.48456847359469 0.845291213651717 0.3309439 0.32274747 prediction 0.690582427303434 Functional Gain - MRPL35 ENSG00000132313 UTR5 Human protein_coding chr2:86426565 chr2:86426566 . . 0 22 hPsi_associated_SNPs_22869 0 0 0 0 1 Ribosome 0.438719058936616 0.438718601950774 0 0 hPsi_site_16593 iPseU_CNN:0;iRNA_PseU:0 16594 chr17 7480706 7480706 1 + G A BLCA 7480705 + 7480685 7480725 41 GCCTTCTGATGTGCTTGAGGTGACCAAGAAGTTCATGAGGG GCCTTCTGATGTGCTTGAGGTAACCAAGAAGTTCATGAGGG < 41bp 0.436018470352378 0.845289737755782 0.21620944 0.31403387 prediction 0.690579475511563 Functional Gain - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480705 chr17:7480706 synonymous SNV . 0 22 hPsi_associated_SNPs_22870 0 0 1 0 2 Cytosol 0.43871115391971 0.439418645178951 0 0 hPsi_site_16594 iPseU_CNN:0;iRNA_PseU:0 16595 chr5 159344459 159344459 1 + G A SKCM 159344458 + 159344438 159344478 41 ATCTCCATCGGGCCTCTCCTTGGGTGGAAGGAGCCGGCACC ATCTCCATCGGGCCTCTCCTTAGGTGGAAGGAGCCGGCACC < 41bp 0.539400741765744 0.884689078665106 0.3263474 0.7987132 prediction 0.690576673798724 Functional Gain - ADRA1B ENSG00000170214 CDS Human protein_coding chr5:159344458 chr5:159344459 nonsynonymous SNV 0.894 4 22 hPsi_associated_SNPs_22871 0 0 0 0 0 exosome 0.438727812098554 0.438719087237984 0.5974264 0 hPsi_site_16595 iPseU_CNN:0.5974264;iRNA_PseU:0 16596 chr1 31194261 31194261 1 + G A UCEC 31194260 + 31194240 31194280 41 GCGTGCACGTACCTTGCTGATGTCAGGGGACCTGGAACGAC GCGTGCACGTACCTTGCTGATATCAGGGGACCTGGAACGAC < 41bp 0.453403701987858 0.845287292720135 0.3769147 0.55772936 prediction 0.690574585440271 Functional Gain - MATN1 ENSG00000162510 CDS Human protein_coding chr1:31194260 chr1:31194261 synonymous SNV . 0 22 hPsi_associated_SNPs_22872 0 0 0 0 0 chromatin 0.439513221155079 0.438994570602662 0.11545872 0 hPsi_site_16596 iPseU_CNN:0.11545872;iRNA_PseU:0 16597 chr14 23240238 23240238 1 + G A rs143046719 23240237 + 23240217 23240257 41 TCTCACCCAGGCAGTGTTTATGTACTGGCTCTCCTCCAATT TCTCACCCAGGCAGTGTTTATATACTGGCTCTCCTCCAATT < 41bp 0.440862715824371 0.845286195122103 0.34639335 0.57900405 prediction 0.690572390244206 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240237 chr14:23240238 nonsynonymous SNV 0.785 0 22 hPsi_associated_SNPs_22873 0 0 1 0 1 Cytosol 0.438721517449475 0.438718622091692 0.1580081 0 hPsi_site_16597 iPseU_CNN:0.1580081;iRNA_PseU:0 16598 chr20 2636004 2636004 1 + G A BLCA 2636003 + 2635983 2636023 41 GTATCACTTTCCGGAGCTGGTGAAGATCATCAACGACAATG GTATCACTTTCCGGAGCTGGTAAAGATCATCAACGACAATG < 41bp 0.541240562867916 0.886518451696657 0.2372376 0.61804813 prediction 0.690555777657481 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2636003 chr20:2636004 synonymous SNV . 0 22 hPsi_associated_SNPs_22874 0 0 1 0 1 Cytosol 0.438724826596479 0.438719690061323 0.23609626 0 hPsi_site_16598 iPseU_CNN:0.23609626;iRNA_PseU:0 16599 chr2 24384418 24384418 1 + G A UCEC 24384417 + 24384397 24384437 41 TAATGACTGTAGTTTTGATTTGAAACCTTTGGCAAGAGCTC TAATGACTGTAGTTTTGATTTAAAACCTTTGGCAAGAGCTC < 41bp 0.510949056585846 0.856218993070661 0.2501947 0.32601786 prediction 0.69053987296963 Functional Gain - FAM228B ENSG00000219626 CDS Human protein_coding chr2:24384417 chr2:24384418 synonymous SNV . 0 22 hPsi_associated_SNPs_22875 0 0 0 0 2 Nucleus 0.438718773746985 0.438696548798775 0 0 hPsi_site_16599 iPseU_CNN:0;iRNA_PseU:0 16600 chr16 3458397 3458397 1 + G A UCEC 3458396 + 3458376 3458416 41 AGGAGCAAAGCCATGTGCAGTGTCAGCTGGCAGATCCAAAG AGGAGCAAAGCCATGTGCAGTATCAGCTGGCAGATCCAAAG < 41bp 0.456651430019924 0.84526432181635 0.3176645 0.3603636 prediction 0.6905286436327 Functional Gain - ZNF174 ENSG00000103343 CDS Human protein_coding chr16:3458396 chr16:3458397 synonymous SNV . 0 22 hPsi_associated_SNPs_22876 0 0 0 0 1 Ribosome 0.438731275192118 0.438720223942602 0 0 hPsi_site_16600 iPseU_CNN:0;iRNA_PseU:0 16601 chr1 166818612 166818612 1 + G A STAD 166818611 + 166818591 166818631 41 TTTGCTCTGGTGGACCAGCGTGTGGCCGAATATGTCAGATA TTTGCTCTGGTGGACCAGCGTATGGCCGAATATGTCAGATA < 41bp 0.436958820422999 0.845258967126226 0.26769817 0.39119637 prediction 0.690517934252452 Functional Gain - POGK ENSG00000143157 CDS Human protein_coding chr1:166818611 chr1:166818612 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_22877 0 0 1 0 0 Nucleus 0.43871876654157 0.438718757081239 0 0 hPsi_site_16601 iPseU_CNN:0;iRNA_PseU:0 16602 chr9 93636530 93636530 1 + C A UCEC 93636529 + 93636509 93636549 41 GCAAGAGAGTACTGTGTCATTCAATCCGTATGAGCCAGAAC GCAAGAGAGTACTGTGTCATTAAATCCGTATGAGCCAGAAC < 41bp 0.491722352380075 0.845258078028117 0.6247084 0.59885836 prediction 0.690516156056235 Functional Gain - SYK ENSG00000165025 CDS Human protein_coding chr9:93636529 chr9:93636530 nonsynonymous SNV 0.094 0 22 hPsi_associated_SNPs_22878 0 0 0 1 2 Cytosol 0.436552969882027 0.438280458607986 0 0 hPsi_site_16602 iPseU_CNN:0;iRNA_PseU:0 16603 chr8 110348368 110348368 1 + G A HNSC 110348367 + 110348347 110348387 41 TGATGTCCAGGTTAGCAAGATGAACAAAGATGCGCAGATGA TGATGTCCAGGTTAGCAAGATAAACAAAGATGCGCAGATGA < 41bp 0.471659905662871 0.845256159823944 0.24483797 0.3159932 prediction 0.690512319647889 Functional Gain - ENY2 ENSG00000120533 CDS Human protein_coding chr8:110348367 chr8:110348368 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22879 0 0 1 0 2 Ribosome 0.438710344688761 0.438811049550815 0 0 hPsi_site_16603 iPseU_CNN:0;iRNA_PseU:0 16604 chr16 29912768 29912768 1 + G A SKCM 29912767 + 29912747 29912787 41 CCTACGCAAGGCGCTACTCCTGGGCTGGGATGGGTAGAGTG CCTACGCAAGGCGCTACTCCTAGGCTGGGATGGGTAGAGTG < 41bp 0.473333919686073 0.845238052914931 0.16017905 0.31689903 prediction 0.690476105829862 Functional Gain - ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912767 chr16:29912768 stopgain 1.000 1 22 hPsi_associated_SNPs_22880 0 0 1 0 0 nucleus 0.438718590685605 0.438718593147624 0 0 hPsi_site_16604 iPseU_CNN:0;iRNA_PseU:0 16605 chr16 22926721 22926721 1 + G A SKCM 22926720 + 22926700 22926740 41 GACCAAAGGATTCCCTTGCTTGAAAAAAACAGAATCGAGCC GACCAAAGGATTCCCTTGCTTAAAAAAAACAGAATCGAGCC < 41bp 0.458844526893082 0.845229196001444 0.5571533 0.85016197 prediction 0.690458392002889 Functional Gain - HS3ST2 ENSG00000122254 CDS Human protein_coding chr16:22926720 chr16:22926721 synonymous SNV . 0 22 hPsi_associated_SNPs_22881 0 0 0 0 0 exosome 0.438718603230377 0.43871780274236 0.58601734 0 hPsi_site_16605 iPseU_CNN:0.58601734;iRNA_PseU:0 16606 chrX 24073746 24073746 1 + G A UCEC 24073745 + 24073725 24073765 41 ATTGCAGGATGTTACCAAGTTGACGCCACTTTCACACGAAG ATTGCAGGATGTTACCAAGTTAACGCCACTTTCACACGAAG < 41bp 0.46673281087143 0.845228520857577 0.42416474 0.6552626 prediction 0.690457041715155 Functional Gain - EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24073745 chrX:24073746 synonymous SNV . 0 22 hPsi_associated_SNPs_22882 0 0 1 0 2 Cytosol 0.437223357252902 0.438718874644196 0.3105252 0 hPsi_site_16606 iPseU_CNN:0.3105252;iRNA_PseU:0 16607 chr19 8431173 8431173 1 + G A BLCA 8431172 + 8431152 8431192 41 CCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATGTCAG CCCGAGATGGCCCAGCCAGTTAACCCGGCTCACAATGTCAG < 41bp 0.443129009912076 0.845225653452502 0.27943268 0.7168569 prediction 0.690451306905004 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8431172 chr19:8431173 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_22883 0 0 0 0 2 Cytosol 0.436884950030589 0.438718019716688 0.4337138 0 hPsi_site_16607 iPseU_CNN:0.4337138;iRNA_PseU:0 16608 chr19 36109867 36109867 1 + G A LIHC 36109866 + 36109846 36109886 41 GCACGATCAGAGCCAGGAGCTGCAGGATGCAGCTGGGCATC GCACGATCAGAGCCAGGAGCTACAGGATGCAGCTGGGCATC < 41bp 0.435315696054518 0.845221777927713 0.32576743 0.63820785 prediction 0.690443555855426 Functional Gain - HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36109866 chr19:36109867 synonymous SNV . 0 22 hPsi_associated_SNPs_22884 0 0 1 0 2 chromatin 0.440007707981507 0.439063578014966 0.2764157 0 hPsi_site_16608 iPseU_CNN:0.2764157;iRNA_PseU:0 16609 chr14 20249241 20249241 1 + G A SKCM 20249240 + 20249220 20249260 41 ACCATTGTGGTGCTAATGTTTGGGCCATCCATCTACATTTA ACCATTGTGGTGCTAATGTTTAGGCCATCCATCTACATTTA < 41bp 0.525270993073944 0.870469883948142 0.2556702 0.45768738 prediction 0.690397781748397 Functional Gain - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20249240 chr14:20249241 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_22885 0 0 0 0 0 unknown 0.438632887325241 0.439032714377507 0 0 hPsi_site_16609 iPseU_CNN:0;iRNA_PseU:0 16610 chr1 179057054 179057054 1 + G A OV 179057053 + 179057033 179057073 41 ATATCCCGTGCAGGAGCAGCTGATGAGCCAGATCCGGGAGA ATATCCCGTGCAGGAGCAGCTAATGAGCCAGATCCGGGAGA < 41bp 0.44039079258811 0.845181283518628 0.26043674 0.48952168 prediction 0.690362567037256 Functional Gain - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179057053 chr1:179057054 synonymous SNV . 0 22 hPsi_associated_SNPs_22886 0 0 1 0 1 Ribosome 0.438717847899075 0.438718590451773 0 0 hPsi_site_16610 iPseU_CNN:0;iRNA_PseU:0 16611 chr5 141018364 141018364 1 + G A COAD 141018363 + 141018343 141018383 41 AATCTCTTTCATCCTTCAGCTGAGGACGATGACATGAATGA AATCTCTTTCATCCTTCAGCTAAGGACGATGACATGAATGA < 41bp 0.454097885481388 0.845179045287271 0.2285777 0.3328129 prediction 0.690358090574543 Functional Gain - RELL2 ENSG00000164620 CDS Human protein_coding chr5:141018363 chr5:141018364 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22887 0 0 0 0 2 chromatin 0.439536713404162 0.439121596928773 0 0 hPsi_site_16611 iPseU_CNN:0;iRNA_PseU:0 16612 chr14 104001837 104001837 1 + G A rs576227632 104001836 + 104001816 104001856 41 CCCAGCCAGAGCCCCTGACATGGGCTGCACTCGCTGAGGCC CCCAGCCAGAGCCCCTGACATAGGCTGCACTCGCTGAGGCC < 41bp 0.484091942448175 0.845173317907785 0.395451 0.7201781 prediction 0.690346635815571 Functional Gain - TRMT61A ENSG00000166166 UTR3 Human protein_coding chr14:104001836 chr14:104001837 . . 0 22 hPsi_associated_SNPs_22888 0 0 1 0 0 Cytosol 0.438718537249133 0.438729983362038 0.4403562 0 hPsi_site_16612 iPseU_CNN:0.4403562;iRNA_PseU:0 16613 chr11 55339726 55339726 1 + G A DLBC 55339725 + 55339705 55339745 41 GGGAACACTGTTGGGTAATTTGCTAATCATTATTAGTGTCA GGGAACACTGTTGGGTAATTTACTAATCATTATTAGTGTCA < 41bp 0.517025292524255 0.86219508644246 0.20588705 0.3154915 prediction 0.690339587836409 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55339725 chr11:55339726 synonymous SNV . 0 22 hPsi_associated_SNPs_22889 0 0 0 0 0 unknown 0.438718715297835 0.438721330442285 0 0 hPsi_site_16613 iPseU_CNN:0;iRNA_PseU:0 16614 chr8 28902927 28902927 1 + G A UCEC 28902926 + 28902906 28902946 41 GAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGCAGT GAAGCAAAGAGGGAAGAAATTACAAACGCTTGCAATGCAGT < 41bp 0.537767114960366 0.882936766208382 0.27073276 0.32221192 prediction 0.690339302496032 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28902926 chr8:28902927 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22890 0 0 1 3 2 Nucleus 0.433913314388001 0.437440611304707 0 0 hPsi_site_16614 iPseU_CNN:0;iRNA_PseU:0 16615 chr7 12727924 12727924 1 + G A STAD 12727923 + 12727903 12727943 41 GACTTCTATCCTGTCCAACCTGCCTTCATTTCAGTCTTTCC GACTTCTATCCTGTCCAACCTACCTTCATTTCAGTCTTTCC < 41bp 0.467950449843656 0.845169569147814 0.15102443 0.25481856 prediction 0.690339138295628 Functional Gain - ARL4A ENSG00000122644 CDS Human protein_coding chr7:12727923 chr7:12727924 synonymous SNV . 0 22 hPsi_associated_SNPs_22891 0 0 1 0 0 Cytosol 0.438718592995106 0.438718592997517 0 0 hPsi_site_16615 iPseU_CNN:0;iRNA_PseU:0 16616 chr4 151504404 151504404 1 + G A HNSC 151504403 + 151504383 151504423 41 GTCATTTCGCCCACCGAATTTGAGGTGGTGCTCTACCTAAA GTCATTTCGCCCACCGAATTTAAGGTGGTGCTCTACCTAAA < 41bp 0.458466339059691 0.845159345808299 0.30184698 0.5392698 prediction 0.690318691616597 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504403 chr4:151504404 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_22892 0 0 0 0 0 nucleus 0.438718591881461 0.438718592993289 0.0785396 0 hPsi_site_16616 iPseU_CNN:0.0785396;iRNA_PseU:0 16617 chr19 4323385 4323385 1 + G A STAD 4323384 + 4323364 4323404 41 TGCCCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGGT TGCCCGCACCAAACAAGTGCTACACACTTTCAAGACCAGGT < 41bp 0.549334668145932 0.894492783207612 0.29267716 0.7649491 prediction 0.690316230123361 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323384 chr19:4323385 nonsynonymous SNV 0.765 0 22 hPsi_associated_SNPs_22893 0 0 1 0 2 cytosol 0.438802048136109 0.438733652417345 0.5298982 0 hPsi_site_16617 iPseU_CNN:0.5298982;iRNA_PseU:0 16618 chr15 89169888 89169888 1 + G A UCEC 89169887 + 89169867 89169907 41 TATGACAAGTACATCAGGCCTGAGATGCCCATCGCTGACTA TATGACAAGTACATCAGGCCTAAGATGCCCATCGCTGACTA < 41bp 0.448899640809283 0.845153143771066 0.26394093 0.31217995 prediction 0.690306287542132 Functional Gain - AEN ENSG00000181026 CDS Human protein_coding chr15:89169887 chr15:89169888 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_22894 0 0 1 0 1 Ribosome 0.43871840105442 0.438718310892206 0 0 hPsi_site_16618 iPseU_CNN:0;iRNA_PseU:0 16619 chr20 2290370 2290370 1 + C A COAD 2290369 + 2290349 2290389 41 AGCGCATCACACAGACAAGTTCTCCAGCCAGGAGCTCATCT AGCGCATCACACAGACAAGTTATCCAGCCAGGAGCTCATCT < 41bp 0.509764711902532 0.854913209234239 0.44630912 0.59453803 prediction 0.690296994663416 Functional Gain - TGM3 ENSG00000125780 CDS Human protein_coding chr20:2290369 chr20:2290370 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_22895 0 0 0 0 1 exosome 0.438734482744057 0.438753326984328 0.18907606 0 hPsi_site_16619 iPseU_CNN:0.18907606;iRNA_PseU:0 16620 chr12 57389816 57389816 1 + C A HNSC 57389815 + 57389795 57389835 41 GTCATGTGCTGGCTGCCCTATCATGTGACCCTGCTGCTGCT GTCATGTGCTGGCTGCCCTATAATGTGACCCTGCTGCTGCT < 41bp 0.507898836448213 0.853045972961067 0.24336302 0.32744718 prediction 0.690294273025708 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389815 chr12:57389816 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_22896 0 0 0 0 0 nucleus 0.438593010424221 0.438713841749094 0 0 hPsi_site_16620 iPseU_CNN:0;iRNA_PseU:0 16621 chr12 133196907 133196907 1 + C A LUAD 133196906 + 133196886 133196926 41 CATCCTCATCAAGAACAGCATCCACTACCCCAAATTCCACT CATCCTCATCAAGAACAGCATACACTACCCCAAATTCCACT < 41bp 0.494552983832135 0.845136470837875 0.3330538 0.65086955 prediction 0.690272941675751 Functional Gain - P2RX2 ENSG00000187848 CDS Human protein_coding chr12:133196906 chr12:133196907 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22897 0 0 0 0 2 exosome 0.438704699186407 0.438669559851 0.3017391 0 hPsi_site_16621 iPseU_CNN:0.3017391;iRNA_PseU:0 16622 chr1 63991379 63991379 1 + G A rs143257051 63991378 + 63991358 63991398 41 TGTAGAGCTGCCTACTTAACTGTCTTCAAAAGCAGCTTGGA TGTAGAGCTGCCTACTTAACTATCTTCAAAAGCAGCTTGGA < 41bp 0.481896138337509 0.845128625850014 0.1709494 0.23927003 prediction 0.690257251700027 Functional Gain - EFCAB7 ENSG00000203965 CDS Human protein_coding chr1:63991378 chr1:63991379 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_22898 0 0 1 0 1 Cytosol 0.438715970966101 0.438496174584558 0 0 hPsi_site_16622 iPseU_CNN:0;iRNA_PseU:0 16623 chr12 52312797 52312797 1 + C A UCEC 52312796 + 52312776 52312816 41 GGAGGACTATAGACCACCCTTCTATGATGTGGTGCCCAATG GGAGGACTATAGACCACCCTTATATGATGTGGTGCCCAATG < 41bp 0.500269660913028 0.845395564244252 0.4194129 0.35495666 prediction 0.690251806662449 Functional Gain - ACVRL1 ENSG00000139567 CDS Human protein_coding chr12:52312796 chr12:52312797 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22899 0 0 0 0 1 Endoplasmic reticulum 0.438719913237441 0.438722801094319 0 0 hPsi_site_16623 iPseU_CNN:0;iRNA_PseU:0 16624 chr22 38073013 38073013 1 + G A BLCA 38073012 + 38072992 38073032 41 GGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGAGAGT GGGTCTGGTCGCCAGCAACCTAAATCTCAAACCTGGAGAGT < 41bp 0.466583982729494 0.845121649324244 0.18485454 0.38882762 prediction 0.690243298648488 Functional Gain - LGALS1 ENSG00000100097 CDS Human protein_coding chr22:38073012 chr22:38073013 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22900 0 0 1 0 1 Ribosome 0.438718532974825 0.438718594390456 0 0 hPsi_site_16624 iPseU_CNN:0;iRNA_PseU:0 16625 chrX 135618206 135618206 1 + C A UCEC 135618205 + 135618185 135618225 41 AGAAATGAAGAAGACTGCCATCCGGCTGCCCAAAGGCAAAC AGAAATGAAGAAGACTGCCATACGGCTGCCCAAAGGCAAAC < 41bp 0.497803588227751 0.845117612795823 0.24337584 0.3385327 prediction 0.690235225591646 Functional Gain - VGLL1 ENSG00000102243 CDS Human protein_coding chrX:135618205 chrX:135618206 synonymous SNV . 0 22 hPsi_associated_SNPs_22901 0 0 0 0 1 unknown 0.43871490940935 0.438718591106825 0 0 hPsi_site_16625 iPseU_CNN:0;iRNA_PseU:0 16626 chr1 248616254 248616254 1 + G A SKCM 248616253 + 248616233 248616273 41 CATGATTCTGCTCATCCACATGGACTCCCGCCTCCACACAC CATGATTCTGCTCATCCACATAGACTCCCGCCTCCACACAC < 41bp 0.486360582197707 0.845116652878383 0.29006043 0.5507909 prediction 0.690233305756765 Functional Gain - OR2T2 ENSG00000196240 CDS Human protein_coding chr1:248616253 chr1:248616254 nonsynonymous SNV 0.154 0 22 hPsi_associated_SNPs_22902 0 0 0 0 0 exosome 0.438624108591474 0.439123118615742 0.1015818 0 hPsi_site_16626 iPseU_CNN:0.1015818;iRNA_PseU:0 16627 chr5 55168177 55168177 1 + C A LUAD 55168176 + 55168156 55168196 41 GCTTCGTGCTCTTTTTTCCTTCCAAGAATAACGATCCCAGA GCTTCGTGCTCTTTTTTCCTTACAAGAATAACGATCCCAGA < 41bp 0.498499340585142 0.845114895416957 0.39925313 0.62507963 prediction 0.690229790833915 Functional Gain - IL31RA ENSG00000164509 CDS Human protein_coding chr5:55168176 chr5:55168177 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_22903 0 0 0 0 1 exosome 0.438718597243621 0.438844999126065 0.25015926 0 hPsi_site_16627 iPseU_CNN:0.25015926;iRNA_PseU:0 16628 chr13 51509073 51509073 1 + G A UCEC 51509072 + 51509052 51509092 41 TGGATAACGTGTTTCCAAATTGCATCTTGTTGCTGAAACTT TGGATAACGTGTTTCCAAATTACATCTTGTTGCTGAAACTT < 41bp 0.446167484238802 0.84509606340823 0.22094762 0.26200545 prediction 0.69019212681646 Functional Gain - RNASEH2B ENSG00000136104 CDS Human protein_coding chr13:51509072 chr13:51509073 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_22904 0 0 1 0 2 Cytosol 0.438718594692447 0.438718529485312 0 0 hPsi_site_16628 iPseU_CNN:0;iRNA_PseU:0 16629 chr10 103900354 103900354 1 + G A LAML 103900353 + 103900333 103900373 41 CCAACTGATCCCAGACGTGGTGCAGTGTCATCAGCCCTGGG CCAACTGATCCCAGACGTGGTACAGTGTCATCAGCCCTGGG < 41bp 0.459284823326523 0.845093398540049 0.33903253 0.63236064 prediction 0.690186797080097 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900353 chr10:103900354 nonsynonymous SNV 0.357 4 22 hPsi_associated_SNPs_22905 0 0 1 0 0 Cytosol 0.438718520556579 0.438719047365637 0.26472128 0 hPsi_site_16629 iPseU_CNN:0.26472128;iRNA_PseU:0 16630 chr19 57909885 57909885 1 + G A STAD 57909884 + 57909864 57909904 41 AGGTTACAGCTTCAAAGCCCTGTCTGTCCAGCCAGAAGGTC AGGTTACAGCTTCAAAGCCCTATCTGTCCAGCCAGAAGGTC < 41bp 0.466838704506386 0.845087278665519 0.27187246 0.42082298 prediction 0.690174557331037 Functional Gain - ZNF548 ENSG00000188785;ENSG00000268133 CDS Human other chr19:57909884 chr19:57909885 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22906 0 0 1 0 1 Nucleus 0.438718593535383 0.438718593292103 0 0 hPsi_site_16630 iPseU_CNN:0;iRNA_PseU:0 16631 chr18 60017110 60017110 1 + G A SKCM 60017109 + 60017089 60017129 41 TGTCTGCCCTGTGGCCCGGATGAATACTTGGATAGCTGGAA TGTCTGCCCTGTGGCCCGGATAAATACTTGGATAGCTGGAA < 41bp 0.442076468966578 0.845082443000012 0.22262636 0.5451292 prediction 0.690164886000023 Functional Gain - TNFRSF11A ENSG00000141655 CDS Human protein_coding chr18:60017109 chr18:60017110 nonsynonymous SNV 0.372 3 22 hPsi_associated_SNPs_22907 0 0 1 0 2 nucleus 0.438718592993719 0.438718589382507 0.0902584 0 hPsi_site_16631 iPseU_CNN:0.0902584;iRNA_PseU:0 16632 chrX 75650615 75650615 1 + G A UCEC 75650614 + 75650594 75650634 41 GCTTATGGATTCAACTAAGCTGCCTATACCAAAGAAAGGAA GCTTATGGATTCAACTAAGCTACCTATACCAAAGAAAGGAA < 41bp 0.466290154650024 0.845079259036537 0.21317184 0.5933131 prediction 0.690158518073074 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75650614 chrX:75650615 synonymous SNV . 0 22 hPsi_associated_SNPs_22908 0 0 0 0 0 membrane 0.438813055687966 0.43873837841684 0.1866262 0 hPsi_site_16632 iPseU_CNN:0.1866262;iRNA_PseU:0 16633 chr3 49212294 49212294 1 + G A KIRC 49212293 + 49212273 49212313 41 TTTGCTGGCTGCGCCATGGCTGAAGGCAGCGTCTTTAGCCT TTTGCTGGCTGCGCCATGGCTAAAGGCAGCGTCTTTAGCCT < 41bp 0.541713630231667 0.886787968025344 0.34170544 0.5767359 prediction 0.690148675587354 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212293 chr3:49212294 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_22909 0 0 1 0 0 Cytosol 0.438793251473811 0.438067492051679 0.1534718 0 hPsi_site_16633 iPseU_CNN:0.1534718;iRNA_PseU:0 16634 chr7 6624666 6624666 1 + G A COAD 6624665 + 6624645 6624685 41 AGGTGTGTGTAACTGGTGTGTGCACCGTTTCGACCATCACT AGGTGTGTGTAACTGGTGTGTACACCGTTTCGACCATCACT < 41bp 0.440779084879401 0.845071256874227 0.2377516 0.73257804 prediction 0.690142513748455 Functional Gain - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6624665 chr7:6624666 synonymous SNV . 0 22 hPsi_associated_SNPs_22910 0 0 1 0 1 Cytosol 0.436832015788364 0.431348390298347 0.46515608 0 hPsi_site_16634 iPseU_CNN:0.46515608;iRNA_PseU:0 16635 chr11 77775081 77775081 1 + G A BLCA 77775080 + 77775060 77775100 41 CCTGGGGGCCAGGCCCAGGCTGAGGCCCCTGATCTCTACAC CCTGGGGGCCAGGCCCAGGCTAAGGCCCCTGATCTCTACAC < 41bp 0.545756786223279 0.890822770682311 0.27664614 0.3550061 prediction 0.690131968918065 Functional Gain - THRSP ENSG00000151365 CDS Human protein_coding chr11:77775080 chr11:77775081 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22911 0 0 0 0 0 nucleolus 0.438718757565349 0.43871859301489 0 0 hPsi_site_16635 iPseU_CNN:0;iRNA_PseU:0 16636 chr15 85326837 85326837 1 + C A UCEC 85326836 + 85326816 85326856 41 CAGCCTGGCCACACAAAGGATCTCTCAGGGCCCACTAAAGA CAGCCTGGCCACACAAAGGATATCTCAGGGCCCACTAAAGA < 41bp 0.496928769456493 0.845064606813099 0.43910065 0.6631544 prediction 0.690129213626198 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326836 chr15:85326837 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_22912 0 0 1 0 0 Cytosol 0.438718467681918 0.438718492819494 0.3263088 0 hPsi_site_16636 iPseU_CNN:0.3263088;iRNA_PseU:0 16637 chr3 66430714 66430714 1 + C T STAD 66430715 - 66430695 66430735 41 GCTCCCCGGGAAACAGAGGGTGCCACTGCTGTTGGCACCAA GCTCCCCGGGAAACAGAGGGTACCACTGCTGTTGGCACCAA < 41bp 0.451628099399849 0.845064196670452 0.26361609 0.5942268 prediction 0.690128393340903 Functional Gain - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430715 chr3:66430714 synonymous SNV . 0 22 hPsi_associated_SNPs_22913 0 0 1 0 0 Ribosome 0.4387185929951 0.438718594073012 0.1884536 0 hPsi_site_16637 iPseU_CNN:0.1884536;iRNA_PseU:0 16638 chr3 10312211 10312211 1 + C A rs557647156 10312210 + 10312190 10312230 41 TCCCAGAATTCTCGTTCATTTCGCTTCTCCAGAAGCTCAGA TCCCAGAATTCTCGTTCATTTAGCTTCTCCAGAAGCTCAGA < 41bp 0.489950224965871 0.845062172992548 0.36679584 0.48382732 prediction 0.690124345985096 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10312210 chr3:10312211 nonsynonymous SNV 0.433 0 22 hPsi_associated_SNPs_22914 0 0 1 0 0 Cytosol 0.438718169333422 0.438717785795415 0 0 hPsi_site_16638 iPseU_CNN:0;iRNA_PseU:0 16639 chr12 98989558 98989558 1 + G A LAML 98989557 + 98989537 98989577 41 TATGCACTGTGTGGCTTTGGTGGGGTCTTAAGTTGTGGTCT TATGCACTGTGTGGCTTTGGTAGGGTCTTAAGTTGTGGTCT < 41bp 0.531472348289893 0.876532958253477 0.31866616 0.7235134 prediction 0.690121219927168 Functional Gain - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98989557 chr12:98989558 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22915 0 0 1 0 2 Ribosome 0.438718758373131 0.438708647038957 0.4470268 0 hPsi_site_16639 iPseU_CNN:0.4470268;iRNA_PseU:0 16640 chr15 85327516 85327516 1 + C A GBM 85327515 + 85327495 85327535 41 AGCCACAGCTTACACAAATGTCGGTGCCCCTGGTCCACCAG AGCCACAGCTTACACAAATGTAGGTGCCCCTGGTCCACCAG < 41bp 0.489838175651725 0.845060283330871 0.5925653 0.8518988 prediction 0.690120566661743 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85327515 chr15:85327516 stopgain 0.799 0 22 hPsi_associated_SNPs_22916 0 0 1 0 0 Cytosol 0.438719141425195 0.438717919206337 0.518667 0 hPsi_site_16640 iPseU_CNN:0.518667;iRNA_PseU:0 16641 chr6 32609178 32609178 1 + C A UCEC 32609177 + 32609157 32609197 41 ATTTGATGGAGATGAGCAGTTCTACGTGGACCTGGAGAGGA ATTTGATGGAGATGAGCAGTTATACGTGGACCTGGAGAGGA < 41bp 0.504924854846938 0.849983547355823 0.44918784 0.8499881 prediction 0.690117385017772 Functional Gain - HLA-DQA1 ENSG00000196735 CDS Human protein_coding chr6:32609177 chr6:32609178 nonsynonymous SNV 0.348 3 22 hPsi_associated_SNPs_22917 0 0 0 0 1 exosome 0.43868235257194 0.437530812870314 0.6999762 0 hPsi_site_16641 iPseU_CNN:0.6999762;iRNA_PseU:0 16642 chr7 29606312 29606312 1 + G A ESCA 29606311 + 29606291 29606331 41 GAGGAGGCAGGCTTTCCTGGTGACCCCCACGAGGACAAGCA GAGGAGGCAGGCTTTCCTGGTAACCCCCACGAGGACAAGCA < 41bp 0.541088902584069 0.886144877495964 0.26304495 0.72607625 prediction 0.690111949823792 Functional Gain - PRR15 ENSG00000176532 CDS Human protein_coding chr7:29606311 chr7:29606312 nonsynonymous SNV 0.048 0 22 hPsi_associated_SNPs_22918 0 0 0 0 0 Cytosol 0.438718592957009 0.438718577751365 0.4521525 0 hPsi_site_16642 iPseU_CNN:0.4521525;iRNA_PseU:0 16643 chr1 116206776 116206776 1 + C A CHOL 116206775 + 116206755 116206795 41 TGTGGATGCCCTCCTCTTCATCCATTACCTGGCCATCGTCC TGTGGATGCCCTCCTCTTCATACATTACCTGGCCATCGTCC < 41bp 0.506869466951913 0.851925437314531 0.30726942 0.70801103 prediction 0.690111940725235 Functional Gain - VANGL1 ENSG00000173218 CDS Human protein_coding chr1:116206775 chr1:116206776 synonymous SNV . 0 22 hPsi_associated_SNPs_22919 0 0 1 0 0 Ribosome 0.438718593402696 0.438718942045082 0.41602206 0 hPsi_site_16643 iPseU_CNN:0.41602206;iRNA_PseU:0 16644 chr4 187004217 187004217 1 + C A rs3775290 187004216 + 187004196 187004236 41 GAGAGGTCTAGAAAATATTTTCGAAATCTATCTTTCCTACA GAGAGGTCTAGAAAATATTTTAGAAATCTATCTTTCCTACA < 41bp 0.497473102589805 0.845055693848268 0.58333313 0.56723803 prediction 0.690111387696536 Functional Gain - TLR3 ENSG00000164342 CDS Human protein_coding chr4:187004216 chr4:187004217 nonsynonymous SNV 0.768 0 22 hPsi_associated_SNPs_22920 0 0 0 0 0 exosome 0.438718604356486 0.438718592995707 0 0 hPsi_site_16644 iPseU_CNN:0;iRNA_PseU:0 16645 chr14 57099822 57099822 1 + G A LGG 57099821 + 57099801 57099841 41 AAATTAGTTCCTTTGGAGATTGTATTCAACCCTGAGGAATG AAATTAGTTCCTTTGGAGATTATATTCAACCCTGAGGAATG < 41bp 0.524208872549992 0.869262426944116 0.24708712 0.63256603 prediction 0.690107108788247 Functional Gain - TMEM260 ENSG00000070269 CDS Human protein_coding chr14:57099821 chr14:57099822 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22921 0 0 0 3 1 Endoplasmic reticulum 0.438699137880804 0.438717180520368 0.26513206 0 hPsi_site_16645 iPseU_CNN:0.26513206;iRNA_PseU:0 16646 chr2 219205492 219205492 1 + G A GBM 219205491 + 219205471 219205511 41 GGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGT GGTCACCTTGGTCGCCATTCTATGTACTCACAAGCACTGGT < 41bp 0.440266436631375 0.845049570763563 0.32549244 0.37915152 prediction 0.690099141527127 Functional Gain - PNKD ENSG00000127838 CDS Human protein_coding chr2:219205491 chr2:219205492 synonymous SNV . 0 22 hPsi_associated_SNPs_22922 0 0 1 0 2 Endoplasmic reticulum 0.438399435993289 0.43559735643934 0 0 hPsi_site_16646 iPseU_CNN:0;iRNA_PseU:0 16647 chr6 27791909 27791909 1 + G A LIHC 27791908 + 27791888 27791928 41 CTCCTCTTGCTCGTCATGTCTGGCCGCGGCAAAGGCGGGAA CTCCTCTTGCTCGTCATGTCTAGCCGCGGCAAAGGCGGGAA < 41bp 0.504823766159451 0.849868088405204 0.18410966 0.2887614 prediction 0.690088644491506 Functional Gain - HIST1H4J ENSG00000197238 CDS Human protein_coding chr6:27791908 chr6:27791909 nonsynonymous SNV 0.211 1 22 hPsi_associated_SNPs_22923 0 0 0 0 0 Ribosome 0.438718133591304 0.438718591457871 0 0 hPsi_site_16647 iPseU_CNN:0;iRNA_PseU:0 16648 chr4 8229293 8229293 1 + G A UCEC 8229292 + 8229272 8229312 41 GGAGAAGTGTGCACAGGTGGTGCCCAAAGCCATGGCCCTGC GGAGAAGTGTGCACAGGTGGTACCCAAAGCCATGGCCCTGC < 41bp 0.432558245366805 0.845037785084305 0.33991367 0.8641488 prediction 0.69007557016861 Functional Gain - SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8229292 chr4:8229293 synonymous SNV . 0 22 hPsi_associated_SNPs_22924 0 0 0 0 0 cytosol 0.4387185929839 0.438718592995084 0.7282976 0 hPsi_site_16648 iPseU_CNN:0.7282976;iRNA_PseU:0 16649 chr2 206562319 206562319 1 + C A CESC 206562318 + 206562298 206562338 41 AAGATGCTGGCTATATCACCTCTCCCGGTTACCCCCAGGAC AAGATGCTGGCTATATCACCTATCCCGGTTACCCCCAGGAC < 41bp 0.514885228756028 0.859922010107985 0.39822105 0.6931231 prediction 0.690073562703913 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206562318 chr2:206562319 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_22925 0 0 0 0 1 Nucleus 0.438718592994851 0.438718595930629 0.3862462 0 hPsi_site_16649 iPseU_CNN:0.3862462;iRNA_PseU:0 16650 chr6 44116553 44116553 1 + C A UCEC 44116552 + 44116532 44116572 41 GCACCTCTCCATCCGAGGCTTCATCTGGTGGCTGCGCTGCC GCACCTCTCCATCCGAGGCTTAATCTGGTGGCTGCGCTGCC < 41bp 0.488309164293912 0.845034837528368 0.26657236 0.29066658 prediction 0.690069675056736 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116552 chr6:44116553 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_22926 0 0 1 3 1 Ribosome 0.438707079099284 0.438718593026774 0 0 hPsi_site_16650 iPseU_CNN:0;iRNA_PseU:0 16651 chr1 99470156 99470156 1 + C T LUAD 99470157 - 99470137 99470177 41 GGTGATCATGGCAGGGACGGTGATGCTGGCGTACTACTTCG GGTGATCATGGCAGGGACGGTAATGCTGGCGTACTACTTCG < 41bp 0.468887359498747 0.845028191513899 0.3082341 0.82667446 prediction 0.690056383027799 Functional Gain - PLPPR5 ENSG00000117598 CDS Human protein_coding chr1:99470157 chr1:99470156 synonymous SNV . 0 22 hPsi_associated_SNPs_22927 0 0 0 0 0 unknown 0.438697912631787 0.438713556685207 0.65334892 0 hPsi_site_16651 iPseU_CNN:0.65334892;iRNA_PseU:0 16652 chr2 241631539 241631539 1 + G A ESCA 241631538 + 241631518 241631558 41 TGGGCTGGGGACTTTGGGCCTGACCTGCTGCTCACCCTGCT TGGGCTGGGGACTTTGGGCCTAACCTGCTGCTCACCCTGCT < 41bp 0.532161787784736 0.87718623051716 0.38836235 0.732869 prediction 0.690048885464848 Functional Gain - AQP12A ENSG00000184945 CDS Human protein_coding chr2:241631538 chr2:241631539 nonsynonymous SNV 0.450 4 22 hPsi_associated_SNPs_22928 0 0 0 0 1 unknown 0.438718604754717 0.438718592992752 0.465738 0 hPsi_site_16652 iPseU_CNN:0.465738;iRNA_PseU:0 16653 chr19 50099726 50099726 1 + G A BLCA 50099725 + 50099705 50099745 41 CGCACCAGTGCCAGCCTGGATGAGGGTGCCACTGCGGCACT CGCACCAGTGCCAGCCTGGATAAGGGTGCCACTGCGGCACT < 41bp 0.532978206961299 0.877998857554479 0.35314506 0.729633 prediction 0.69004130118636 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099725 chr19:50099726 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_22929 0 0 1 0 0 Exosome 0.438717045059195 0.438718592817283 0.459266 0 hPsi_site_16653 iPseU_CNN:0.459266;iRNA_PseU:0 16654 chr19 38849148 38849148 1 + C A UCEC 38849147 + 38849127 38849167 41 AATGGCCCCCAAGGGCATCTTCTGTAACCCGTACAACAATC AATGGCCCCCAAGGGCATCTTATGTAACCCGTACAACAATC < 41bp 0.48330317849133 0.845012103113711 0.3924889 0.42188394 prediction 0.690024206227422 Functional Gain - CATSPERG ENSG00000099338 CDS Human protein_coding chr19:38849147 chr19:38849148 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_22930 0 0 0 0 2 chromatin 0.43871688932813 0.438718643670831 0 0 hPsi_site_16654 iPseU_CNN:0;iRNA_PseU:0 16655 chr19 39868206 39868206 1 + G A LUSC 39868205 + 39868185 39868225 41 ACTCCCATCAAGGCCTACAGTGTCCTCCAGGCCACCGTGGC ACTCCCATCAAGGCCTACAGTATCCTCCAGGCCACCGTGGC < 41bp 0.554485476121836 0.899497415229266 0.25892842 0.34965262 prediction 0.690023878214861 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868205 chr19:39868206 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_22931 0 0 1 0 1 Ribosome 0.438964024971841 0.43964658376405 0 0 hPsi_site_16655 iPseU_CNN:0;iRNA_PseU:0 16656 chr15 40758285 40758285 1 + G A UCEC 40758284 + 40758264 40758304 41 CTGGTGTTCCTTTGCCGCCATGTCTATGACTTCCGCCACGG CTGGTGTTCCTTTGCCGCCATATCTATGACTTCCGCCACGG < 41bp 0.461690437063169 0.845011413980354 0.31069064 0.60521686 prediction 0.690022827960708 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40758284 chr15:40758285 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_22932 0 0 1 0 0 chromatin 0.438726539941156 0.438719253422516 0.21043372 0 hPsi_site_16656 iPseU_CNN:0.21043372;iRNA_PseU:0 16657 chrX 51644872 51644872 1 + C A CHOL 51644871 + 51644851 51644891 41 GAGATTTTGGAGATCCCTGGTCCAGAATTCCATTTACCTTC GAGATTTTGGAGATCCCTGGTACAGAATTCCATTTACCTTC < 41bp 0.501798351172409 0.846800916925465 0.23081255 0.3781499 prediction 0.690005131506113 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644871 chrX:51644872 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22933 0 0 1 0 0 chromatin 0.438718592995101 0.438718593006339 0 0 hPsi_site_16657 iPseU_CNN:0;iRNA_PseU:0 16658 chr12 112223106 112223106 1 + C A PCPG 112223105 + 112223085 112223125 41 GGACAATGGCAAGCCCTATGTCATCTCCTACCTGGTGGATT GGACAATGGCAAGCCCTATGTAATCTCCTACCTGGTGGATT < 41bp 0.490132467901937 0.844998463009116 0.5069938 0.75564694 prediction 0.689996926018232 Functional Gain - ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112223105 chr12:112223106 synonymous SNV . 0 22 hPsi_associated_SNPs_22934 0 0 1 0 2 chromatin 0.438718606732443 0.438722402946619 0.49730628 0 hPsi_site_16658 iPseU_CNN:0.49730628;iRNA_PseU:0 16659 chr9 130263351 130263351 1 + G A rs140786088 130263350 + 130263330 130263370 41 CCCCAGGAGCCTCCTGAGTCTGTGAGGCCATCCGCTCCCCC CCCCAGGAGCCTCCTGAGTCTATGAGGCCATCCGCTCCCCC < 41bp 0.550917776267679 0.895911943116098 0.3501302 0.6830671 prediction 0.689988333696838 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130263350 chr9:130263351 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_22935 2 0 0 0 2 chromatin 0.438718401691492 0.438718548786956 0.3661342 0 hPsi_site_16659 iPseU_CNN:0.3661342;iRNA_PseU:0 16660 chr1 113638878 113638878 1 + G A OV 113638877 + 113638857 113638897 41 AACCAGCTGACCCGCCTGGATGAATCTGCCTTTGTGGGTCT AACCAGCTGACCCGCCTGGATAAATCTGCCTTTGTGGGTCT < 41bp 0.44706220427348 0.844990290379214 0.21339196 0.38601652 prediction 0.689980580758428 Functional Gain - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113638877 chr1:113638878 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22936 0 0 1 0 1 Nucleus 0.438720006161553 0.438720043939952 0 0 hPsi_site_16660 iPseU_CNN:0;iRNA_PseU:0 16661 chr1 210415075 210415075 1 + C A STAD 210415074 + 210415054 210415094 41 ACTGGTGCTTCCCTGCCTGCTCTTTCAATGGCACCTCTGCC ACTGGTGCTTCCCTGCCTGCTATTTCAATGGCACCTCTGCC < 41bp 0.506511929503432 0.851497963613686 0.32137558 0.53988963 prediction 0.689972068220507 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415074 chr1:210415075 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_22937 0 0 1 0 0 exosome 0.438718472801175 0.43871503887142 0.07977926 0 hPsi_site_16661 iPseU_CNN:0.07977926;iRNA_PseU:0 16662 chr10 106166531 106166531 1 + G A SKCM 106166530 + 106166510 106166550 41 AGCAAGACTGAAGAGGTGGTTGAAAAAGAGCTGCTCCTCCA AGCAAGACTGAAGAGGTGGTTAAAAAAGAGCTGCTCCTCCA < 41bp 0.541302253743593 0.886285208417554 0.62874526 0.85610104 prediction 0.689965909347922 Functional Gain - CFAP58 ENSG00000120051 CDS Human protein_coding chr10:106166530 chr10:106166531 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_22938 0 0 0 0 2 nucleolus 0.438718218517171 0.438718638561393 0.45471156 0 hPsi_site_16662 iPseU_CNN:0.45471156;iRNA_PseU:0 16663 chr7 143807240 143807240 1 + G A STAD 143807239 + 143807219 143807259 41 TCTGTCCTCAAGCTGGCCTGTGCTGACACCTGGGTTAACCA TCTGTCCTCAAGCTGGCCTGTACTGACACCTGGGTTAACCA < 41bp 0.46789037376886 0.844982298249004 0.27195632 0.6198325 prediction 0.689964596498008 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807239 chr7:143807240 nonsynonymous SNV 0.789 0 22 hPsi_associated_SNPs_22939 0 0 0 0 0 unknown 0.438727175083853 0.438741103330141 0.239665 0 hPsi_site_16663 iPseU_CNN:0.239665;iRNA_PseU:0 16664 chrX 35820500 35820500 1 + G A SKCM 35820499 + 35820479 35820519 41 GCTAAGGCAGAGAGTCCTCTTGAGGTTCCTCAGAGTTTCTG GCTAAGGCAGAGAGTCCTCTTAAGGTTCCTCAGAGTTTCTG < 41bp 0.455464182183928 0.844981359819164 0.34216243 0.5991388 prediction 0.689962719638328 Functional Gain - MAGEB16 ENSG00000189023 CDS Human protein_coding chrX:35820499 chrX:35820500 nonsynonymous SNV 0.156 0 22 hPsi_associated_SNPs_22940 0 0 0 0 0 exosome 0.438718475671076 0.438718322243358 0.1982776 0 hPsi_site_16664 iPseU_CNN:0.1982776;iRNA_PseU:0 16665 chr9 133542038 133542038 1 + C A UCEC 133542037 + 133542017 133542057 41 GGTGCTGCCTGCGGAGGTGATCATCGCTCAGAGCTCCATCC GGTGCTGCCTGCGGAGGTGATAATCGCTCAGAGCTCCATCC < 41bp 0.50574338977868 0.85072413772018 0.27953875 0.69076014 prediction 0.689961495882999 Functional Gain - PRDM12 ENSG00000130711 CDS Human protein_coding chr9:133542037 chr9:133542038 synonymous SNV . 0 22 hPsi_associated_SNPs_22941 0 0 0 0 1 exosome 0.438669435090159 0.438660550673987 0.38152028 0 hPsi_site_16665 iPseU_CNN:0.38152028;iRNA_PseU:0 16666 chr19 51630497 51630497 1 + G A GBM 51630496 + 51630476 51630516 41 GGGATGCAGCTGAATTCACCTGCAGAGCTCAGAACCCTCTC GGGATGCAGCTGAATTCACCTACAGAGCTCAGAACCCTCTC < 41bp 0.442657386269886 0.844976966956998 0.25571078 0.325025 prediction 0.689953933913997 Functional Gain - SIGLEC9 ENSG00000129450 CDS Human protein_coding chr19:51630496 chr19:51630497 nonsynonymous SNV 0.411 4 22 hPsi_associated_SNPs_22942 0 0 0 0 0 exosome 0.438720529218302 0.438718466842959 0 0 hPsi_site_16666 iPseU_CNN:0;iRNA_PseU:0 16667 chr22 45723854 45723854 1 + C A rs9615108 45723853 + 45723833 45723873 41 GATGGACAGGGGCGCCATGGTCCTGACCACCAACTATGACA GATGGACAGGGGCGCCATGGTACTGACCACCAACTATGACA < 41bp 0.506567582751712 0.85154143736593 0.2126725 0.68211293 prediction 0.689947709228436 Functional Gain - FAM118A ENSG00000100376 CDS Human protein_coding chr22:45723853 chr22:45723854 synonymous SNV . 0 22 hPsi_associated_SNPs_22943 0 0 1 0 1 Cytosol 0.43872659437785 0.438172253240665 0.36422586 0 hPsi_site_16667 iPseU_CNN:0.36422586;iRNA_PseU:0 16668 chr1 27097676 27097676 1 + G A LGG 27097675 + 27097655 27097695 41 GTGGGCACATCAAGCAGTGCTGCCAGCTCCTTGAAAAAGCA GTGGGCACATCAAGCAGTGCTACCAGCTCCTTGAAAAAGCA < 41bp 0.448488427031283 0.844965376579657 0.21158212 0.33128202 prediction 0.689930753159314 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27097675 chr1:27097676 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22944 0 0 1 0 0 Nucleus 0.438263904145564 0.438825569571547 0 0 hPsi_site_16668 iPseU_CNN:0;iRNA_PseU:0 16669 chr5 128351679 128351679 1 + G A COAD 128351678 + 128351658 128351698 41 CAGATTTGGAAATATAAAGGTGTGTGAACTTTATGCAGCTA CAGATTTGGAAATATAAAGGTATGTGAACTTTATGCAGCTA < 41bp 0.45053717387278 0.844963359872071 0.31963524 0.61698973 prediction 0.689926719744142 Functional Gain - SLC27A6 ENSG00000113396 CDS Human protein_coding chr5:128351678 chr5:128351679 synonymous SNV . 0 22 hPsi_associated_SNPs_22945 0 0 0 0 1 Endoplasmic reticulum 0.438720856002896 0.438708903002303 0.23397946 0 hPsi_site_16669 iPseU_CNN:0.23397946;iRNA_PseU:0 16670 chr19 13063804 13063804 1 + G A BLCA 13063803 + 13063783 13063823 41 ATCCAGGCCTATTTCGCGTGTGAAAAAAATGAGAACTTGGC ATCCAGGCCTATTTCGCGTGTAAAAAAAATGAGAACTTGGC < 41bp 0.539557832564575 0.884517116547653 0.2585528 0.43313956 prediction 0.689918567966156 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13063803 chr19:13063804 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22946 0 0 1 0 1 Ribosome 0.438686445862496 0.438719449183709 0 0 hPsi_site_16670 iPseU_CNN:0;iRNA_PseU:0 16671 chrX 23410846 23410846 1 + G A LIHC 23410845 + 23410825 23410865 41 AGGCAGCCAGGATTTTCTGCTGCAATTCCTGTATTGCAATC AGGCAGCCAGGATTTTCTGCTACAATTCCTGTATTGCAATC < 41bp 0.539732160484067 0.884689594115879 0.44548118 0.5399988 prediction 0.689914867263624 Functional Gain - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23410845 chrX:23410846 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22947 0 0 0 0 0 exosome 0.438718402608323 0.438717298866929 0.0799976 0 hPsi_site_16671 iPseU_CNN:0.0799976;iRNA_PseU:0 16672 chr15 42602953 42602953 1 + G A LAML 42602952 + 42602932 42602972 41 GGTCAGATCTCGCACTCATGTGCACTGGATGTCAGAGAGTG GGTCAGATCTCGCACTCATGTACACTGGATGTCAGAGAGTG < 41bp 0.438781176145672 0.844955802304437 0.25753063 0.33755177 prediction 0.689911604608873 Functional Gain - GANC ENSG00000214013 CDS Human protein_coding chr15:42602952 chr15:42602953 synonymous SNV . 0 22 hPsi_associated_SNPs_22948 0 0 0 0 2 chromatin 0.438705847080046 0.438727798232926 0 0 hPsi_site_16672 iPseU_CNN:0;iRNA_PseU:0 16673 chr17 36623161 36623161 1 + G A UCEC 36623160 + 36623140 36623180 41 TCTGGCCTGCAGGGCCTGGATGACCTCGGGTACATCGGCTA TCTGGCCTGCAGGGCCTGGATAACCTCGGGTACATCGGCTA < 41bp 0.450876704851828 0.844955066181844 0.54361725 0.774609 prediction 0.689910132363689 Functional Gain - ARHGAP23 ENSG00000225485 CDS Human other chr17:36623160 chr17:36623161 nonsynonymous SNV 0.410 3 22 hPsi_associated_SNPs_22949 0 0 0 0 0 nucleus 0.438718531623716 0.438719343103357 0.4619835 0 hPsi_site_16673 iPseU_CNN:0.4619835;iRNA_PseU:0 16674 chr19 45491388 45491388 1 + G A UCEC 45491387 + 45491367 45491407 41 GCTGGCGCTCACCATCATCGTGTCTATCGTTCACAGTGTCT GCTGGCGCTCACCATCATCGTATCTATCGTTCACAGTGTCT < 41bp 0.43486108284653 0.84495232897022 0.26138794 0.5693367 prediction 0.689904657940439 Functional Gain - CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45491387 chr19:45491388 synonymous SNV . 0 22 hPsi_associated_SNPs_22950 0 0 1 0 2 Cytosol 0.438860089519441 0.438842599901706 0.1386734 0 hPsi_site_16674 iPseU_CNN:0.1386734;iRNA_PseU:0 16675 chr19 42791250 42791250 1 + G A BLCA 42791249 + 42791229 42791269 41 CCCCCTGGAGCCACATGCCCTGAGAGCCCAGGACCCGGACC CCCCCTGGAGCCACATGCCCTAAGAGCCCAGGACCCGGACC < 41bp 0.44714778724571 0.84495231562113 0.29357308 0.3374793 prediction 0.689904631242259 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42791249 chr19:42791250 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22951 0 0 1 0 1 Cytosol 0.438722116912607 0.438718580188179 0 0 hPsi_site_16675 iPseU_CNN:0;iRNA_PseU:0 16676 chr1 116670178 116670178 1 + G A SKCM 116670177 + 116670157 116670197 41 ACTGGAGCTGGTCCCCGCAGTGGAGATCCCCACCACCTGGT ACTGGAGCTGGTCCCCGCAGTAGAGATCCCCACCACCTGGT < 41bp 0.429015598271632 0.844951200677314 0.3767665 0.6536265 prediction 0.689902401354628 Functional Gain - MAB21L3 ENSG00000173212 CDS Human protein_coding chr1:116670177 chr1:116670178 synonymous SNV . 0 22 hPsi_associated_SNPs_22952 0 0 1 0 2 nucleus 0.438718577689364 0.438718626507545 0.307253 0 hPsi_site_16676 iPseU_CNN:0.307253;iRNA_PseU:0 16677 chr12 53452948 53452948 1 + C A PRAD 53452947 + 53452927 53452967 41 CTCCACCACCCCCCATGCTCTCTGTCAGCAGCGACTCAGGC CTCCACCACCCCCCATGCTCTATGTCAGCAGCGACTCAGGC < 41bp 0.491556307947102 0.844946992881385 0.33576348 0.4435807 prediction 0.68989398576277 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53452947 chr12:53452948 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22953 0 0 0 0 0 cytosol 0.438716416094139 0.438514258398328 0 0 hPsi_site_16677 iPseU_CNN:0;iRNA_PseU:0 16678 chr15 75647063 75647063 1 + G A UCEC 75647062 + 75647042 75647082 41 AGAGACCTTCCTAAGAGGACTGCAACCCAGCGGCCTGAGGG AGAGACCTTCCTAAGAGGACTACAACCCAGCGGCCTGAGGG < 41bp 0.456149679624191 0.844946636002722 0.44642088 0.8000597 prediction 0.689893272005444 Functional Gain - NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75647062 chr15:75647063 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22954 0 0 1 0 2 chromatin 0.438728310199331 0.438721450646066 0.6001194 0 hPsi_site_16678 iPseU_CNN:0.6001194;iRNA_PseU:0 16679 chr11 2324134 2324134 1 + G A UCEC 2324133 + 2324113 2324153 41 TACTTCGGGGCCCACTTTGCTGTCATCCGCCGAGCGTCCCT TACTTCGGGGCCCACTTTGCTATCATCCGCCGAGCGTCCCT < 41bp 0.524834335357561 0.869780950510329 0.25755146 0.4499854 prediction 0.689893230305536 Functional Gain - TSPAN32 ENSG00000064201 CDS Human protein_coding chr11:2324133 chr11:2324134 nonsynonymous SNV 0.034 0 22 hPsi_associated_SNPs_22955 0 0 0 0 1 Endoplasmic reticulum 0.438718584719643 0.43871857541981 0 0 hPsi_site_16679 iPseU_CNN:0;iRNA_PseU:0 16680 chr9 131671231 131671231 1 + G A rs116679304 131671230 + 131671210 131671250 41 GATGGCGAACCTGACTGAGCTGGAGCTGATCCGCTGTGACC GATGGCGAACCTGACTGAGCTAGAGCTGATCCGCTGTGACC < 41bp 0.540593759523399 0.885539042227913 0.2723595 0.39469087 prediction 0.689890565409029 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671230 chr9:131671231 synonymous SNV . 0 22 hPsi_associated_SNPs_22956 0 0 1 0 0 Endoplasmic reticulum 0.43778779993284 0.438751521709139 0 0 hPsi_site_16680 iPseU_CNN:0;iRNA_PseU:0 16681 chr20 30672293 30672293 1 + C A UCEC 30672292 + 30672272 30672312 41 CCTGGGAGATCCCTCGGGAATCCCTCAAGCTGGAGAAGAAA CCTGGGAGATCCCTCGGGAATACCTCAAGCTGGAGAAGAAA < 41bp 0.483016999741183 0.844943337439665 0.22417599 0.36423278 prediction 0.689886674879331 Functional Gain - HCK ENSG00000101336 CDS Human protein_coding chr20:30672292 chr20:30672293 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22957 0 0 0 0 2 Nucleus 0.438718592995102 0.438718592995102 0 0 hPsi_site_16681 iPseU_CNN:0;iRNA_PseU:0 16682 chr14 20216345 20216345 1 + G A UCEC 20216344 + 20216324 20216364 41 AGTGGTCAGCCTGATCTTCGTGCCATGCGTATTCATCTATT AGTGGTCAGCCTGATCTTCGTACCATGCGTATTCATCTATT < 41bp 0.523285347252705 0.868227461887858 0.22800496 0.687717 prediction 0.689884229270306 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216344 chr14:20216345 synonymous SNV . 0 22 hPsi_associated_SNPs_22958 0 0 0 0 0 unknown 0.433763247255649 0.43806968100068 0.375434 0 hPsi_site_16682 iPseU_CNN:0.375434;iRNA_PseU:0 16683 chr2 219495489 219495489 1 + G A LUAD 219495488 + 219495468 219495508 41 GCAGCTGCTGAGCACCACCTTGGATGGGGTGCTGCCCACTC GCAGCTGCTGAGCACCACCTTAGATGGGGTGCTGCCCACTC < 41bp 0.439462958630648 0.844932859092008 0.27533096 0.6666118 prediction 0.689865718184016 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219495488 chr2:219495489 synonymous SNV . 0 22 hPsi_associated_SNPs_22959 0 0 0 0 1 chromatin 0.438656188609324 0.438718575639037 0.3332236 0 hPsi_site_16683 iPseU_CNN:0.3332236;iRNA_PseU:0 16684 chr2 220439894 220439894 1 + G A rs140014760 220439893 + 220439873 220439913 41 TCCCTCTGCTCTGCGCCTGCTGCAGAGGCCTCCGGAGGAAC TCCCTCTGCTCTGCGCCTGCTACAGAGGCCTCCGGAGGAAC < 41bp 0.542436037429286 0.887356245470147 0.59358096 0.7528046 prediction 0.689840416081721 Functional Gain - INHA ENSG00000123999 CDS Human protein_coding chr2:220439893 chr2:220439894 synonymous SNV . 0 22 hPsi_associated_SNPs_22960 0 0 0 0 0 cytosol 0.438681717978322 0.438710567064317 0.31844728 0 hPsi_site_16684 iPseU_CNN:0.31844728;iRNA_PseU:0 16685 chr12 122677474 122677474 1 + G A rs560343366 122677473 + 122677453 122677493 41 CTCGGGGCCTTCGACCATCTTGCAGATGCCGAGGGCCTCTG CTCGGGGCCTTCGACCATCTTACAGATGCCGAGGGCCTCTG < 41bp 0.548151847616791 0.893051986700316 0.3213095 0.46696964 prediction 0.68980027816705 Functional Gain - LRRC43 ENSG00000158113 CDS Human protein_coding chr12:122677473 chr12:122677474 synonymous SNV . 0 22 hPsi_associated_SNPs_22961 0 0 0 0 0 cytosol 0.438718621434478 0.438721624573039 0 0 hPsi_site_16685 iPseU_CNN:0;iRNA_PseU:0 16686 chr19 10572299 10572299 1 + C A LUSC 10572298 + 10572278 10572318 41 GCAGGAGGACAACTGCGACATCTTCCAGAACCTCAGCAAGC GCAGGAGGACAACTGCGACATATTCCAGAACCTCAGCAAGC < 41bp 0.487547239501196 0.844887637666404 0.486408 0.70590734 prediction 0.689775275332809 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10572298 chr19:10572299 synonymous SNV . 0 22 hPsi_associated_SNPs_22962 0 0 0 0 2 chromatin 0.437636717684182 0.438555665633419 0.41181468 0 hPsi_site_16686 iPseU_CNN:0.41181468;iRNA_PseU:0 16687 chr2 219679277 219679277 1 + G A UCEC 219679276 + 219679256 219679296 41 CTTCCTTTATAGACCCAGTTTGTGTTCTGCCACTATGTGGT CTTCCTTTATAGACCCAGTTTATGTTCTGCCACTATGTGGT < 41bp 0.546535194902183 0.891409542491895 0.26528525 0.28462338 prediction 0.689748695179423 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679276 chr2:219679277 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22963 0 0 1 0 1 cytosol 0.438714304087897 0.438549094308924 0 0 hPsi_site_16687 iPseU_CNN:0;iRNA_PseU:0 16688 chrX 70340874 70340874 1 + G A LUSC 70340873 + 70340853 70340893 41 GAGCAGTTACAGAAGATGGCTGAATACTACCGGCCAGGGCC GAGCAGTTACAGAAGATGGCTAAATACTACCGGCCAGGGCC < 41bp 0.539437587919757 0.884310889056942 0.24592763 0.34692627 prediction 0.689746602274371 Functional Gain - MED12 ENSG00000184634 CDS Human protein_coding chrX:70340873 chrX:70340874 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_22964 0 0 1 0 1 Cytosol 0.438718592047454 0.438718592995102 0 0 hPsi_site_16688 iPseU_CNN:0;iRNA_PseU:0 16689 chr12 53494616 53494616 1 + C A UCEC 53494615 + 53494595 53494635 41 CCACGCCCTCCCAGCCCAATTCTGCGGGTGTCCAAGACACT CCACGCCCTCCCAGCCCAATTATGCGGGTGTCCAAGACACT < 41bp 0.505323543395916 0.850181234582517 0.3106333 0.5427598 prediction 0.689715382373203 Functional Gain - IGFBP6 ENSG00000167779 CDS Human protein_coding chr12:53494615 chr12:53494616 nonsynonymous SNV 0.151 0 22 hPsi_associated_SNPs_22965 0 0 0 0 1 nucleus 0.438719859500904 0.438718115493471 0.0855196 0 hPsi_site_16689 iPseU_CNN:0.0855196;iRNA_PseU:0 16690 chr11 56756748 56756748 1 + G A SKCM 56756747 + 56756727 56756767 41 TCTCCTGGCTATGATGGCAGTGGATCCTTATGTTGCCATCT TCTCCTGGCTATGATGGCAGTAGATCCTTATGTTGCCATCT < 41bp 0.478145423369849 0.844855078365553 0.19133991 0.2702399 prediction 0.689710156731105 Functional Gain - OR5AK2 ENSG00000181273 CDS Human protein_coding chr11:56756747 chr11:56756748 synonymous SNV . 0 22 hPsi_associated_SNPs_22966 0 0 0 0 0 unknown 0.438720154739516 0.4387185902977 0 0 hPsi_site_16690 iPseU_CNN:0;iRNA_PseU:0 16691 chr16 30762482 30762482 1 + G A STAD 30762481 + 30762461 30762501 41 CGAGCTACTGGCCACGAGTTTGCGGTGAAGATTATGGAAGT CGAGCTACTGGCCACGAGTTTACGGTGAAGATTATGGAAGT < 41bp 0.433515606302834 0.844851384435009 0.24393502 0.50967294 prediction 0.689702768870018 Functional Gain - PHKG2 ENSG00000156873 CDS Human protein_coding chr16:30762481 chr16:30762482 nonsynonymous SNV 0.072 4 22 hPsi_associated_SNPs_22967 0 0 1 0 1 Ribosome 0.438757553151572 0.44319417774969 0.0193458799999999 0 hPsi_site_16691 iPseU_CNN:0.0193458799999999;iRNA_PseU:0 16692 chr1 11080535 11080535 1 + G A HNSC 11080534 + 11080514 11080554 41 GAAAAGTGTTTGTGGGGCGCTGTACAGAGGACATGACTGAG GAAAAGTGTTTGTGGGGCGCTATACAGAGGACATGACTGAG < 41bp 0.447146006199013 0.844845040072467 0.17590502 0.44827175 prediction 0.689690080144935 Functional Gain - TARDBP ENSG00000120948 CDS Human protein_coding chr1:11080534 chr1:11080535 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_22968 0 0 1 0 1 Cytosol 0.43880729050895 0.439688672528032 0 0 hPsi_site_16692 iPseU_CNN:0;iRNA_PseU:0 16693 chr3 14862939 14862939 1 + C A LUSC 14862938 + 14862918 14862958 41 GAACTCGGACTATGAGAATATCCAGATTCCACCCCGGAGAC GAACTCGGACTATGAGAATATACAGATTCCACCCCGGAGAC < 41bp 0.498075942944468 0.844844093950521 0.5276813 0.75413907 prediction 0.689688187901043 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14862938 chr3:14862939 synonymous SNV . 0 22 hPsi_associated_SNPs_22969 0 0 0 0 0 Cytosol 0.438718592875791 0.438718595654314 0.45291554 0 hPsi_site_16693 iPseU_CNN:0.45291554;iRNA_PseU:0 16694 chr12 15742465 15742465 1 + G A LUSC 15742464 + 15742444 15742484 41 ATTCGGGATCATGAGTTTGTTGACATCTTAGGGCTGGTGTC ATTCGGGATCATGAGTTTGTTAACATCTTAGGGCTGGTGTC < 41bp 0.530268388757891 0.875111466087218 0.22017685 0.33026436 prediction 0.689686154658653 Functional Gain - PTPRO ENSG00000151490 CDS Human protein_coding chr12:15742464 chr12:15742465 nonsynonymous SNV 0.613 4 22 hPsi_associated_SNPs_22970 0 0 0 0 2 chromatin 0.438629077023514 0.43871851291528 0 0 hPsi_site_16694 iPseU_CNN:0;iRNA_PseU:0 16695 chr4 5830336 5830336 1 + G A CESC 5830335 + 5830315 5830355 41 AAAGACGATCTTGCCCTGGCTGATGACCACTAGTGGGGAGC AAAGACGATCTTGCCCTGGCTAATGACCACTAGTGGGGAGC < 41bp 0.53634771438529 0.881182432121296 0.18081659 0.40460414 prediction 0.689669435472012 Functional Gain - CRMP1 ENSG00000072832 CDS Human protein_coding chr4:5830335 chr4:5830336 synonymous SNV . 0 22 hPsi_associated_SNPs_22971 0 0 0 0 1 exosome 0.438728689564118 0.438718572198922 0 0 hPsi_site_16695 iPseU_CNN:0;iRNA_PseU:0 16696 chr5 65105422 65105422 1 + G A STAD 65105421 + 65105401 65105441 41 GCAAATGCTTGAAAATTGGGTGTGGGACGTCGATTCCCTCC GCAAATGCTTGAAAATTGGGTATGGGACGTCGATTCCCTCC < 41bp 0.446694941268791 0.84481997344939 0.488677 0.69467807 prediction 0.689639946898779 Functional Gain - NLN ENSG00000123213 CDS Human protein_coding chr5:65105421 chr5:65105422 synonymous SNV . 0 22 hPsi_associated_SNPs_22972 0 0 1 0 1 Ribosome 0.438762800316895 0.438736166084197 0.38935614 0 hPsi_site_16696 iPseU_CNN:0.38935614;iRNA_PseU:0 16697 chr10 85909866 85909866 1 + C A BLCA 85909865 + 85909845 85909885 41 ATTAGGGGGTCCTCTTCTCATCAGAGCTGCATGGTACACAG ATTAGGGGGTCCTCTTCTCATAAGAGCTGCATGGTACACAG < 41bp 0.505352201723887 0.850171933669214 0.14047939 0.17127609 prediction 0.689639463890652 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85909865 chr10:85909866 synonymous SNV . 0 22 hPsi_associated_SNPs_22973 0 0 1 0 1 Ribosome 0.438717877618021 0.438778215452589 0 0 hPsi_site_16697 iPseU_CNN:0;iRNA_PseU:0 16698 chr3 113795748 113795748 1 + G A STAD 113795747 + 113795727 113795767 41 CCTGGAGGCTAGACTACGCTTGCTGTCATCAGTCACTGCAG CCTGGAGGCTAGACTACGCTTACTGTCATCAGTCACTGCAG < 41bp 0.547020921864078 0.891833216253089 0.20158896 0.29245 prediction 0.689624588778021 Functional Gain - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113795747 chr3:113795748 synonymous SNV . 0 22 hPsi_associated_SNPs_22974 0 0 1 0 0 Nucleus 0.438698223746519 0.43872180346994 0 0 hPsi_site_16698 iPseU_CNN:0;iRNA_PseU:0 16699 chrX 30236819 30236819 1 + G A rs74852235 30236818 + 30236798 30236838 41 AGGAAGAAGAGGCCCCCTGCTGTTCCTCTTCTGTTTCTGGG AGGAAGAAGAGGCCCCCTGCTATTCCTCTTCTGTTTCTGGG < 41bp 0.460705342754814 0.844809346956445 0.32497576 0.6351081 prediction 0.689618693912891 Functional Gain - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236818 chrX:30236819 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_22975 0 0 0 0 0 exosome 0.438720625415873 0.438718128918111 0.2702162 0 hPsi_site_16699 iPseU_CNN:0.2702162;iRNA_PseU:0 16700 chr19 1358418 1358418 1 + G A CESC 1358417 + 1358397 1358437 41 AAGGTGAAAAGCACTGAAGTTGAGATCCTAGAGAAGTCTCA AAGGTGAAAAGCACTGAAGTTAAGATCCTAGAGAAGTCTCA < 41bp 0.540714785900218 0.885521496197375 0.36353645 0.7151027 prediction 0.689613420594313 Functional Gain - MUM1 ENSG00000160953 CDS Human protein_coding chr19:1358417 chr19:1358418 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_22976 0 0 1 0 2 Cytosol 0.412401973428955 0.438723006520296 0.4302054 0 hPsi_site_16700 iPseU_CNN:0.4302054;iRNA_PseU:0 16701 chr15 22928162 22928162 1 + G A STAD 22928161 + 22928141 22928181 41 GAGGAGGGCCAAGAATATGCTGTCATGCTGTACACCTGGAG GAGGAGGGCCAAGAATATGCTATCATGCTGTACACCTGGAG < 41bp 0.548204122759533 0.893010131384876 0.513669 0.73406786 prediction 0.689612017250685 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22928161 chr15:22928162 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_22977 0 0 1 0 2 Cytosol 0.438625593281234 0.438631431991027 0.44079772 0 hPsi_site_16701 iPseU_CNN:0.44079772;iRNA_PseU:0 16702 chr1 155252376 155252376 1 + G A LUSC 155252375 + 155252355 155252395 41 CTTCCGAACGGGCATCGTGGTGGAGGAGGGTGCTGAGATCC CTTCCGAACGGGCATCGTGGTAGAGGAGGGTGCTGAGATCC < 41bp 0.436851776335374 0.844802111893405 0.19415674 0.55102706 prediction 0.689604223786811 Functional Gain - HCN3 ENSG00000143630 CDS Human protein_coding chr1:155252375 chr1:155252376 synonymous SNV . 0 22 hPsi_associated_SNPs_22978 0 0 1 0 0 chromatin 0.438744380872401 0.438718145222211 0.10205412 0 hPsi_site_16702 iPseU_CNN:0.10205412;iRNA_PseU:0 16703 chr11 17793340 17793340 1 + G A COAD 17793339 + 17793319 17793359 41 CGTTCGCAATGGCACGCAAGTGCGCTACTACCGGGAGGCCG CGTTCGCAATGGCACGCAAGTACGCTACTACCGGGAGGCCG < 41bp 0.544596507604866 0.889398549047239 0.6051453 0.8302751 prediction 0.689604082884746 Functional Gain - KCNC1 ENSG00000129159 CDS Human protein_coding chr11:17793339 chr11:17793340 synonymous SNV . 0 22 hPsi_associated_SNPs_22979 0 0 0 0 0 exosome 0.438845405167454 0.439344662583326 0.4502596 0 hPsi_site_16703 iPseU_CNN:0.4502596;iRNA_PseU:0 16704 chr1 37947308 37947308 1 + G A LUAD 37947307 + 37947287 37947327 41 CTATGACGACAGATTCATTGTGAAGCTGGCCTACGAGTCTG CTATGACGACAGATTCATTGTAAAGCTGGCCTACGAGTCTG < 41bp 0.436156832565125 0.844790880599218 0.27271706 0.40651008 prediction 0.689581761198437 Functional Gain - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37947307 chr1:37947308 synonymous SNV . 0 22 hPsi_associated_SNPs_22980 0 0 0 0 0 Nucleus 0.438719661402922 0.438728458082385 0 0 hPsi_site_16704 iPseU_CNN:0;iRNA_PseU:0 16705 chr4 44684387 44684387 1 + G A HNSC 44684386 + 44684366 44684406 41 ACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCTATC ACTGTAGCAAACTTCTTTCTTACCTTCGAAGCACAGCTATC < 41bp 0.444675975684641 0.844789678795962 0.17596892 0.2533423 prediction 0.689579357591924 Functional Gain - GUF1 ENSG00000151806;ENSG00000163281 CDS Human other chr4:44684386 chr4:44684387 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_22981 0 0 1 2 2 Ribosome 0.442265727382029 0.434293577709092 0 0 hPsi_site_16705 iPseU_CNN:0;iRNA_PseU:0 Serum thyroid-stimulating hormone levels 16706 chr3 122447187 122447187 1 + G A LGG 122447186 + 122447166 122447206 41 GGAAAGGGAACCTATTTTGCTGTCAATGCCAATTATTCTGC GGAAAGGGAACCTATTTTGCTATCAATGCCAATTATTCTGC < 41bp 0.465087728283343 0.844781506624163 0.15092984 0.15840134 prediction 0.689563013248326 Functional Gain - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122447186 chr3:122447187 nonsynonymous SNV 0.949 4 22 hPsi_associated_SNPs_22982 0 0 0 0 1 Nucleus 0.4387161313146 0.438718471915802 0 0 hPsi_site_16706 iPseU_CNN:0;iRNA_PseU:0 16707 chr4 123664256 123664256 1 + G A rs17006092 123664255 + 123664235 123664275 41 GGCAAATCACGTGTTACAGGTGTTAATCCAGTTCAAGGTGA GGCAAATCACGTGTTACAGGTATTAATCCAGTTCAAGGTGA < 41bp 0.537539243988136 0.882314649057986 0.3402934 0.5294883 prediction 0.689550810139698 Functional Gain - BBS12 ENSG00000181004 CDS Human protein_coding chr4:123664255 chr4:123664256 synonymous SNV . 0 22 hPsi_associated_SNPs_22983 2 0 0 0 0 Cytosol 0.43871859300029 0.438718592996411 0.0589766 0 hPsi_site_16707 iPseU_CNN:0.0589766;iRNA_PseU:0 16708 chr3 38048085 38048085 1 + C A UCEC 38048084 + 38048064 38048104 41 CTGGCAGCAGAACCAGCAGCTCCGTCAGCAGCACCAGCGCC CTGGCAGCAGAACCAGCAGCTACGTCAGCAGCACCAGCGCC < 41bp 0.514350212383052 0.859120321590845 0.2755199 0.7146276 prediction 0.689540218415587 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38048084 chr3:38048085 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_22984 0 0 0 0 0 chromatin 0.438718593015674 0.438718910337909 0.4292552 0 hPsi_site_16708 iPseU_CNN:0.4292552;iRNA_PseU:0 16709 chr6 36259161 36259161 1 + G A UCEC 36259160 + 36259140 36259180 41 GAAATCCTTCCTGGGGCCCTTGTCCCCGTCCTGTAAGATGG GAAATCCTTCCTGGGGCCCTTATCCCCGTCCTGTAAGATGG < 41bp 0.549720688337597 0.894490205217922 0.2880954 0.35570127 prediction 0.68953903376065 Functional Gain - PNPLA1 ENSG00000180316 CDS Human protein_coding chr6:36259160 chr6:36259161 synonymous SNV . 0 22 hPsi_associated_SNPs_22985 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_16709 iPseU_CNN:0;iRNA_PseU:0 16710 chr1 158577071 158577071 1 + G A ESCA 158577070 + 158577050 158577090 41 TGCCATGACCTATACTGTAGTGACCCCCCTCCTTAATCCCA TGCCATGACCTATACTGTAGTAACCCCCCTCCTTAATCCCA < 41bp 0.476087038454307 0.844768613464277 0.19454974 0.4754745 prediction 0.689537226928554 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158577070 chr1:158577071 synonymous SNV . 0 22 hPsi_associated_SNPs_22986 0 0 0 0 0 unknown 0.438718592995103 0.438718592995102 0 0 hPsi_site_16710 iPseU_CNN:0;iRNA_PseU:0 16711 chr14 104571709 104571709 1 + G A SKCM 104571708 + 104571688 104571728 41 GGAGATGACGCCACCCTCGGTGGAAGAGCGCCGGCCCTCAC GGAGATGACGCCACCCTCGGTAGAAGAGCGCCGGCCCTCAC < 41bp 0.547405325126776 0.89216952778181 0.6593826 0.80024564 prediction 0.689528405310068 Functional Gain - ASPG ENSG00000166183 CDS Human protein_coding chr14:104571708 chr14:104571709 synonymous SNV . 0 22 hPsi_associated_SNPs_22987 0 0 0 0 2 exosome 0.438746835012396 0.438073886912839 0.28172608 0 hPsi_site_16711 iPseU_CNN:0.28172608;iRNA_PseU:0 16712 chr20 44506338 44506338 1 + G A SKCM 44506337 + 44506317 44506357 41 GAACTGCTGTGGTACATGCATGTTAGGAAGGGCCTGCTTGC GAACTGCTGTGGTACATGCATATTAGGAAGGGCCTGCTTGC < 41bp 0.455353010445279 0.844763566625412 0.20491838 0.25431138 prediction 0.689527133250823 Functional Gain - ZSWIM3 ENSG00000132801 CDS Human protein_coding chr20:44506337 chr20:44506338 nonsynonymous SNV 0.980 0 22 hPsi_associated_SNPs_22988 0 0 0 0 0 Cytosol 0.438718129413874 0.438718575291877 0 0 hPsi_site_16712 iPseU_CNN:0;iRNA_PseU:0 16713 chrX 23410762 23410762 1 + C A UCEC 23410761 + 23410741 23410781 41 CAGACTCCATGCTCTCCTTTTCTCTCACCACTGCCATGTAC CAGACTCCATGCTCTCCTTTTATCTCACCACTGCCATGTAC < 41bp 0.503665873402379 0.848428258232496 0.6261727 0.60172445 prediction 0.689524769660235 Functional Gain - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23410761 chrX:23410762 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_22989 0 0 0 0 0 exosome 0.438717994052204 0.438581836960783 0 0 hPsi_site_16713 iPseU_CNN:0;iRNA_PseU:0 16714 chr17 38457168 38457168 1 + G A LUSC 38457167 + 38457147 38457187 41 AGAAGTTGATGGTAACAGGATGACCTTGAGCCAAGAAGGAG AGAAGTTGATGGTAACAGGATAACCTTGAGCCAAGAAGGAG < 41bp 0.444411918779786 0.844730415591481 0.20438093 0.47211966 prediction 0.689460831182961 Functional Gain - CDC6 ENSG00000094804 CDS Human protein_coding chr17:38457167 chr17:38457168 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_22990 0 0 1 0 1 Nucleus 0.438718594896881 0.438718592994388 0 0 hPsi_site_16714 iPseU_CNN:0;iRNA_PseU:0 16715 chr2 88474877 88474877 1 + C A LUSC 88474876 + 88474856 88474896 41 CTGCACAAAGATTCAGGAGCTCCAGATGACAACGGTGCTGA CTGCACAAAGATTCAGGAGCTACAGATGACAACGGTGCTGA < 41bp 0.492181940270446 0.844730022001764 0.3159665 0.4573074 prediction 0.689460044003529 Functional Gain - THNSL2 ENSG00000144115 CDS Human protein_coding chr2:88474876 chr2:88474877 synonymous SNV . 0 22 hPsi_associated_SNPs_22991 0 0 0 0 1 exosome 0.438511748195959 0.438716787848606 0 0 hPsi_site_16715 iPseU_CNN:0;iRNA_PseU:0 16716 chr3 183860651 183860651 1 + C A UCEC 183860650 + 183860630 183860670 41 AGCCGGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATC AGCCGGACAGCCGGGGAGGCTACCCTCAGATGGATGACATC < 41bp 0.485416131712769 0.844720906838042 0.38597453 0.6540266 prediction 0.689441813676085 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860650 chr3:183860651 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_22992 0 0 1 0 2 Ribosome 0.438718592995102 0.438718592995091 0.3080532 0 hPsi_site_16716 iPseU_CNN:0.3080532;iRNA_PseU:0 16717 chr22 41613200 41613200 1 + C T HNSC 41613201 - 41613181 41613221 41 CTCCAGGGCACTCACGTGCTTGAAACAGCTGACGGGAGCAG CTCCAGGGCACTCACGTGCTTAAAACAGCTGACGGGAGCAG < 41bp 0.532132718824497 0.876852541110203 0.29866788 0.49448767 prediction 0.68943964457141 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41613201 chr22:41613200 synonymous SNV . 0 22 hPsi_associated_SNPs_22993 0 0 0 0 0 Ribosome 0.438758749402035 0.438706308155551 0 0 hPsi_site_16717 iPseU_CNN:0;iRNA_PseU:0 16718 chr10 90673070 90673070 1 + G A rs35493467 90673069 + 90673049 90673089 41 GCAGATTGATGGGAGCGCTTTGTCCTGCTTTTCCACACACC GCAGATTGATGGGAGCGCTTTATCCTGCTTTTCCACACACC < 41bp 0.458124085337398 0.844712530455166 0.3553113 0.6667877 prediction 0.689425060910333 Functional Gain - STAMBPL1 ENSG00000138134 CDS Human protein_coding chr10:90673069 chr10:90673070 synonymous SNV . 0 22 hPsi_associated_SNPs_22994 0 0 0 0 0 Nucleus 0.438861947127244 0.438726587145842 0.3335754 0 hPsi_site_16718 iPseU_CNN:0.3335754;iRNA_PseU:0 16719 chr1 20915652 20915652 1 + G A SKCM 20915651 + 20915631 20915671 41 GAAGCGTCCTGCCTGCACCCTGAAGCCTGAGTGTGTCCAGC GAAGCGTCCTGCCTGCACCCTAAAGCCTGAGTGTGTCCAGC < 41bp 0.533018316775299 0.877726421637677 0.27583498 0.46960402 prediction 0.689416209724754 Functional Gain - CDA ENSG00000158825 CDS Human protein_coding chr1:20915651 chr1:20915652 synonymous SNV . 0 22 hPsi_associated_SNPs_22995 0 0 1 1 0 nucleus 0.438760117064807 0.438717032598218 0 0 hPsi_site_16719 iPseU_CNN:0;iRNA_PseU:0 16720 chr9 108424891 108424891 1 + G A LUAD 108424890 + 108424870 108424910 41 TCACCCTCCAGACAAAAAGCTGAGCAAAAATGAAACGCTTC TCACCCTCCAGACAAAAAGCTAAGCAAAAATGAAACGCTTC < 41bp 0.464670593321773 0.844706753147521 0.30136794 0.6396701 prediction 0.689413506295042 Functional Gain - TAL2 ENSG00000186051 CDS Human protein_coding chr9:108424890 chr9:108424891 synonymous SNV . 0 22 hPsi_associated_SNPs_22996 0 0 0 0 0 exosome 0.438736726058093 0.438681197722338 0.2793402 0 hPsi_site_16720 iPseU_CNN:0.2793402;iRNA_PseU:0 16721 chr2 27352686 27352686 1 + C A LUAD 27352685 + 27352665 27352705 41 GGGCTGGTGGCAGCACTGACTCTGTCTGCATGCTGGGATTC GGGCTGGTGGCAGCACTGACTATGTCTGCATGCTGGGATTC < 41bp 0.480970035412819 0.844696983655826 0.2603088 0.33099633 prediction 0.689393967311652 Functional Gain - ABHD1 ENSG00000143994 CDS Human protein_coding chr2:27352685 chr2:27352686 nonsynonymous SNV 0.663 0 22 hPsi_associated_SNPs_22997 0 0 0 0 1 exosome 0.439901998364208 0.438244303089175 0 0 hPsi_site_16721 iPseU_CNN:0;iRNA_PseU:0 16722 chr5 177569870 177569870 1 + C A UCEC 177569869 + 177569849 177569889 41 TCAGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATG TCAGAACTTCGACTCTGAGATATGTGGTGTTGTGTCAGATG < 41bp 0.504864724560641 0.849561308317774 0.31151396 0.3832566 prediction 0.689393167514266 Functional Gain - RMND5B ENSG00000145916 CDS Human protein_coding chr5:177569869 chr5:177569870 synonymous SNV . 0 22 hPsi_associated_SNPs_22998 0 0 1 0 1 Cytosol 0.438719752275593 0.438732895950107 0 0 hPsi_site_16722 iPseU_CNN:0;iRNA_PseU:0 16723 chr1 36553698 36553698 1 + G A UCEC 36553697 + 36553677 36553717 41 CGCAAGCTGACCGTGCCTGCTGAGAGGTTCGTGCCTGAGGT CGCAAGCTGACCGTGCCTGCTAAGAGGTTCGTGCCTGAGGT < 41bp 0.536335356316903 0.881015435960249 0.20626691 0.24855858 prediction 0.689360159286693 Functional Gain - TEKT2 ENSG00000092850 CDS Human protein_coding chr1:36553697 chr1:36553698 nonsynonymous SNV 0.107 0 22 hPsi_associated_SNPs_22999 0 0 0 0 0 exosome 0.438715633244974 0.438719500947327 0 0 hPsi_site_16723 iPseU_CNN:0;iRNA_PseU:0 16724 chr20 61870828 61870828 1 + G A SKCM 61870827 + 61870807 61870847 41 GAGGACGTGCAAGGTGTGCCTGGACCGCGCCGTGTCCATCG GAGGACGTGCAAGGTGTGCCTAGACCGCGCCGTGTCCATCG < 41bp 0.445337353699915 0.844678013420905 0.1934222 0.48510492 prediction 0.68935602684181 Functional Gain - BIRC7 ENSG00000101197 CDS Human protein_coding chr20:61870827 chr20:61870828 synonymous SNV . 0 22 hPsi_associated_SNPs_23000 0 0 0 0 1 exosome 0.440258907787179 0.438753423416419 0 0 hPsi_site_16724 iPseU_CNN:0;iRNA_PseU:0 16725 chr4 107252963 107252963 1 + G A LUAD 107252962 + 107252942 107252982 41 CCTGATGCAGATTCTTTGTATGTGGAAGAAGTAGATGTCGG CCTGATGCAGATTCTTTGTATATGGAAGAAGTAGATGTCGG < 41bp 0.450635464825187 0.84467565667447 0.5950509 0.5864117 prediction 0.689351313348939 Functional Gain - AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107252962 chr4:107252963 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_23001 0 0 1 0 1 Ribosome 0.438718597062364 0.438718596264442 0 0 hPsi_site_16725 iPseU_CNN:0;iRNA_PseU:0 16726 chr5 150400241 150400241 1 + G A STAD 150400240 + 150400220 150400260 41 CCCGGCTGCTGCAGGCGTCCTGCCTGCTTTCCCTGCTCCTG CCCGGCTGCTGCAGGCGTCCTACCTGCTTTCCCTGCTCCTG < 41bp 0.535549225400875 0.880218306123353 0.34238112 0.6634811 prediction 0.689338161444957 Functional Gain - GPX3 ENSG00000211445 CDS Human protein_coding chr5:150400240 chr5:150400241 unknown 0.983 0 22 hPsi_associated_SNPs_23002 0 0 1 0 1 Ribosome 0.438718752816975 0.438728245641461 0.3269622 0 hPsi_site_16726 iPseU_CNN:0.3269622;iRNA_PseU:0 16727 chr4 6302431 6302431 1 + G A PRAD 6302430 + 6302410 6302450 41 CATGGAGATCAAGGAGTACCTGATTGACATGGCCTCCAGGG CATGGAGATCAAGGAGTACCTAATTGACATGGCCTCCAGGG < 41bp 0.464917915366186 0.844649971536458 0.2641003 0.6043585 prediction 0.689299943072917 Functional Gain - WFS1 ENSG00000109501 CDS Human protein_coding chr4:6302430 chr4:6302431 synonymous SNV . 0 22 hPsi_associated_SNPs_23003 0 0 0 0 1 nucleus 0.438718651521349 0.438718592986192 0.208717 0 hPsi_site_16727 iPseU_CNN:0.208717;iRNA_PseU:0 16728 chr10 124800167 124800167 1 + G A KIRP 124800166 + 124800146 124800186 41 AGAACAAAAGGCCACCTATTTGCCTCAGCTCACTACAGAAA AGAACAAAAGGCCACCTATTTACCTCAGCTCACTACAGAAA < 41bp 0.4549053578334 0.844641053945581 0.27332556 0.31421262 prediction 0.689282107891163 Functional Gain - ACADSB ENSG00000196177 CDS Human protein_coding chr10:124800166 chr10:124800167 synonymous SNV . 0 22 hPsi_associated_SNPs_23004 0 0 1 0 1 Cytosol 0.440117437131686 0.439464744478804 0 0 hPsi_site_16728 iPseU_CNN:0;iRNA_PseU:0 16729 chr11 32610646 32610646 1 + G A BLCA 32610645 + 32610625 32610665 41 ATTAAAGTGGCAGCATCTTGTGGGGCCATCCAGTACATCCC ATTAAAGTGGCAGCATCTTGTAGGGCCATCCAGTACATCCC < 41bp 0.54331900440999 0.887954016328777 0.24026987 0.31402457 prediction 0.689270023837574 Functional Gain - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32610645 chr11:32610646 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_23005 0 0 1 0 2 Cytosol 0.438718593229983 0.438718592995102 0 0 hPsi_site_16729 iPseU_CNN:0;iRNA_PseU:0 16730 chr2 172336591 172336591 1 + C A UCEC 172336590 + 172336570 172336610 41 AAGATGAGTTAGATTTGCTTTCTGTGGTAGCTGTTACTCAA AAGATGAGTTAGATTTGCTTTATGTGGTAGCTGTTACTCAA < 41bp 0.500585171463794 0.845211201878024 0.29900157 0.29533696 prediction 0.689252060828459 Functional Gain - DCAF17 ENSG00000115827 CDS Human protein_coding chr2:172336590 chr2:172336591 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23006 0 0 0 3 1 chromatin 0.438855772698751 0.438389890342584 0 0 hPsi_site_16730 iPseU_CNN:0;iRNA_PseU:0 16731 chr2 103095476 103095476 1 + C A LUAD 103095475 + 103095455 103095495 41 CGTTCTGGAGGGCGGCTACTTCATGCCCACCCGGCCCTTCT CGTTCTGGAGGGCGGCTACTTAATGCCCACCCGGCCCTTCT < 41bp 0.508901888941728 0.853517613502787 0.2612177 0.50590414 prediction 0.689231449122117 Functional Gain - SLC9A4 ENSG00000180251 CDS Human protein_coding chr2:103095475 chr2:103095476 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_23007 0 0 0 0 0 exosome 0.438718592637002 0.438718592995066 0.0118082799999999 0 hPsi_site_16731 iPseU_CNN:0.0118082799999999;iRNA_PseU:0 16732 chr1 111893920 111893920 1 + G A UCEC 111893919 + 111893899 111893939 41 TTTAGAAAGCATCGGAACCGTGTGGCCTACCTAAGCCTGTA TTTAGAAAGCATCGGAACCGTATGGCCTACCTAAGCCTGTA < 41bp 0.481753108099452 0.844604618326514 0.2944083 0.6147527 prediction 0.689209236653029 Functional Gain - PIFO ENSG00000173947 CDS Human protein_coding chr1:111893919 chr1:111893920 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23008 0 0 0 0 1 exosome 0.43871859298919 0.438718592859933 0.2295054 0 hPsi_site_16732 iPseU_CNN:0.2295054;iRNA_PseU:0 16733 chr2 96687149 96687149 1 + G A rs60607082 96687148 + 96687128 96687168 41 TTACCCAGGGGATGTCATCCTGACTGGGACCCCCCCACCTC TTACCCAGGGGATGTCATCCTAACTGGGACCCCCCCACCTC < 41bp 0.464841923140506 0.844600578369103 0.13746837 0.28764755 prediction 0.689201156738206 Functional Gain - FAHD2CP ENSG00000231584 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:96687148 chr2:96687149 . . 0 22 hPsi_associated_SNPs_23009 0 0 0 1 2 unknown 0.438529071726892 0.438702275019013 0 0 hPsi_site_16733 iPseU_CNN:0;iRNA_PseU:0 16734 chr4 129792885 129792885 1 + G A SARC 129792884 + 129792864 129792904 41 GAAGAGACAATCGTTTTCATTGTGATCTCATTAAAGGAGAC GAAGAGACAATCGTTTTCATTATGATCTCATTAAAGGAGAC < 41bp 0.47023003192988 0.844594896398227 0.2063173 0.31128573 prediction 0.689189792796454 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129792884 chr4:129792885 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23010 0 0 1 0 0 Ribosome 0.43870051067468 0.438721537815422 0 0 hPsi_site_16734 iPseU_CNN:0;iRNA_PseU:0 16735 chr16 66918476 66918476 1 + G A LUAD 66918475 + 66918455 66918495 41 GAGACAACCCACAAGATTCTTGACCTTGAAAGCAGAGTCCC GAGACAACCCACAAGATTCTTAACCTTGAAAGCAGAGTCCC < 41bp 0.455638141930144 0.8445910426192 0.19048914 0.29720324 prediction 0.689182085238399 Functional Gain - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918475 chr16:66918476 nonsynonymous SNV 0.827 0 22 hPsi_associated_SNPs_23011 0 0 1 0 0 nucleolus 0.438718594965537 0.438718642313278 0 0 hPsi_site_16735 iPseU_CNN:0;iRNA_PseU:0 16736 chr19 18956861 18956861 1 + G A HNSC 18956860 + 18956840 18956880 41 AAGACCAGCCAGTTGTTGGCTGAGTTGAACTTCGAGGAAGA AAGACCAGCCAGTTGTTGGCTAAGTTGAACTTCGAGGAAGA < 41bp 0.449424718513403 0.844585764949435 0.31083435 0.4295807 prediction 0.68917152989887 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18956860 chr19:18956861 nonsynonymous SNV 0.852 2 22 hPsi_associated_SNPs_23012 0 0 1 0 2 Nucleus 0.438733740067171 0.43888104825136 0 0 hPsi_site_16736 iPseU_CNN:0;iRNA_PseU:0 16737 chrX 34961015 34961015 1 + G A UCEC 34961014 + 34960994 34961034 41 GACTCCAAGCCCTGGTACTGTGACAAACCGCCTTCCAAGTA GACTCCAAGCCCTGGTACTGTAACAAACCGCCTTCCAAGTA < 41bp 0.526477722651869 0.87105889344177 0.31496164 0.7902857 prediction 0.689162341579801 Functional Gain - FAM47B ENSG00000189132 CDS Human protein_coding chrX:34961014 chrX:34961015 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_23013 0 0 0 0 0 unknown 0.438718594012421 0.438718788528429 0.5805714 0 hPsi_site_16737 iPseU_CNN:0.5805714;iRNA_PseU:0 16738 chr11 55606482 55606482 1 + G A SKCM 55606481 + 55606461 55606501 41 CATTGCTCCCATGATGCTGGTGAACCTGGTTGTAGAAGATA CATTGCTCCCATGATGCTGGTAAACCTGGTTGTAGAAGATA < 41bp 0.473924838239334 0.844580509664438 0.15707842 0.30966598 prediction 0.689161019328876 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606481 chr11:55606482 synonymous SNV . 0 22 hPsi_associated_SNPs_23014 0 0 0 0 0 unknown 0.438721195755358 0.438718599622961 0 0 hPsi_site_16738 iPseU_CNN:0;iRNA_PseU:0 16739 chrX 7177469 7177469 1 + C A UCEC 7177468 + 7177448 7177488 41 ACATCACGGCTTCAATTATTTCTATGGGATCTCTTTGACCA ACATCACGGCTTCAATTATTTATATGGGATCTCTTTGACCA < 41bp 0.511299446159581 0.85587252344581 0.3823508 0.7542597 prediction 0.68914615457246 Functional Gain - STS ENSG00000101846 CDS Human protein_coding chrX:7177468 chrX:7177469 nonsynonymous SNV 0.004 5 22 hPsi_associated_SNPs_23015 0 0 0 0 1 Cytosol 0.438190907765774 0.438734235370962 0.5085194 0 hPsi_site_16739 iPseU_CNN:0.5085194;iRNA_PseU:0 16740 chr13 58299257 58299257 1 + G A UCEC 58299256 + 58299236 58299276 41 GGCAAGGGTCTTTGCAGATGTGCATTCCAGAGCCAGCCGGG GGCAAGGGTCTTTGCAGATGTACATTCCAGAGCCAGCCGGG < 41bp 0.546169592216499 0.890735194060838 0.26805604 0.6411364 prediction 0.689131203688679 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58299256 chr13:58299257 synonymous SNV . 0 22 hPsi_associated_SNPs_23016 0 0 0 0 0 exosome 0.438955874323956 0.439696811258774 0.2822728 0 hPsi_site_16740 iPseU_CNN:0.2822728;iRNA_PseU:0 16741 chr2 219500599 219500599 1 + C A LUAD 219500598 + 219500578 219500618 41 TCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAGACA TCCACTGGTGAAAGTGCAGATATTTGGCGTTCGTCTAGACA < 41bp 0.506982070518928 0.851544727496893 0.58360064 0.71508455 prediction 0.68912531395593 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219500598 chr2:219500599 synonymous SNV . 0 22 hPsi_associated_SNPs_23017 0 0 0 0 2 chromatin 0.43871846552569 0.438687446960986 0.26296782 0 hPsi_site_16741 iPseU_CNN:0.26296782;iRNA_PseU:0 16742 chr6 36168875 36168875 1 + G A BLCA 36168874 + 36168854 36168894 41 GCCAGTGGCTATGCCGCTGCTGCCTGCAGTCTCCCTCCCGG GCCAGTGGCTATGCCGCTGCTACCTGCAGTCTCCCTCCCGG < 41bp 0.435293807771947 0.844557599107136 0.2817338 0.62434506 prediction 0.689115198214271 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36168874 chr6:36168875 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23018 0 0 1 0 0 chromatin 0.438720336052719 0.438723495129937 0.24869012 0 hPsi_site_16742 iPseU_CNN:0.24869012;iRNA_PseU:0 16743 chr7 128357012 128357012 1 + G A SKCM 128357011 + 128356991 128357031 41 ACCAGGGGCAGAACCAGACATGGAACAGACCATCCATAGCC ACCAGGGGCAGAACCAGACATAGAACAGACCATCCATAGCC < 41bp 0.454039271123893 0.844553050916077 0.21912795 0.37262455 prediction 0.689106101832155 Functional Gain - FAM71F1 ENSG00000135248 CDS Human protein_coding chr7:128357011 chr7:128357012 stopgain 0.999 0 22 hPsi_associated_SNPs_23019 0 0 0 0 1 exosome 0.438698937709334 0.438712796872697 0 0 hPsi_site_16743 iPseU_CNN:0;iRNA_PseU:0 16744 chr9 100124558 100124558 1 + C A BLCA 100124557 + 100124537 100124577 41 GAGGCGCATGGGCCTGTGGGTCTCGGGGCAGCAGTGAGGCA GAGGCGCATGGGCCTGTGGGTATCGGGGCAGCAGTGAGGCA < 41bp 0.488917381025961 0.844551865283078 0.17296883 0.41861475 prediction 0.689103730566157 Functional Gain - CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100124557 chr9:100124558 nonsynonymous SNV 0.052 0 22 hPsi_associated_SNPs_23020 0 0 0 0 1 chromatin 0.438717325127964 0.43871236981531 0 0 hPsi_site_16744 iPseU_CNN:0;iRNA_PseU:0 16745 chr7 100459125 100459125 1 + G A UCEC 100459124 + 100459104 100459144 41 TGGTGGCTCCCTGCTCCTCATGGGTCTGCTGGCTGCCCTGC TGGTGGCTCCCTGCTCCTCATAGGTCTGCTGGCTGCCCTGC < 41bp 0.456266672112162 0.84455168425288 0.21362919 0.34420353 prediction 0.689103368505759 Functional Gain - SLC12A9 ENSG00000146828 CDS Human protein_coding chr7:100459124 chr7:100459125 nonsynonymous SNV 0.985 2 22 hPsi_associated_SNPs_23021 0 0 1 0 1 Cytosol 0.43871934815914 0.438765692411796 0 0 hPsi_site_16745 iPseU_CNN:0;iRNA_PseU:0 16746 chr20 49195803 49195803 1 + G A OV 49195802 + 49195782 49195822 41 GATCCAGACAGCCGACCAGCTGCGCTTCTCCTACCTGGCTG GATCCAGACAGCCGACCAGCTACGCTTCTCCTACCTGGCTG < 41bp 0.552834687997456 0.897373946921403 0.29549694 0.90167403 prediction 0.689078517847894 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49195802 chr20:49195803 synonymous SNV . 0 22 hPsi_associated_SNPs_23022 0 0 1 0 2 Ribosome 0.437360422817561 0.437354244222666 0.80334806 0 hPsi_site_16746 iPseU_CNN:0.80334806;iRNA_PseU:0 16747 chr3 39130739 39130739 1 + C A UCEC 39130738 + 39130718 39130758 41 TTAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCT TTAGGCTGCTCTGCCGAGATTACGGGGGTGAGACTGAGTCT < 41bp 0.499287724725348 0.844538298290945 0.28037715 0.339508 prediction 0.68907659658189 Functional Gain - WDR48 ENSG00000114742 CDS Human protein_coding chr3:39130738 chr3:39130739 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_23023 0 0 1 0 2 Ribosome 0.438718592995087 0.438710434038156 0 0 hPsi_site_16747 iPseU_CNN:0;iRNA_PseU:0 16748 chr3 31661244 31661244 1 + G A BRCA 31661243 + 31661223 31661263 41 ACTTGGGTGTCTTTCTTCTTTGATCTACATATTCTTGTATG ACTTGGGTGTCTTTCTTCTTTAATCTACATATTCTTGTATG < 41bp 0.541432261834238 0.885967266128164 0.26120895 0.29319865 prediction 0.689070008587853 Functional Gain - STT3B ENSG00000163527 CDS Human protein_coding chr3:31661243 chr3:31661244 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23024 0 0 1 0 2 Nucleus 0.438703588285218 0.4386717581385 0 0 hPsi_site_16748 iPseU_CNN:0;iRNA_PseU:0 16749 chr17 48559685 48559685 1 + C A GBM 48559684 + 48559664 48559704 41 CCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTGCAGCGGG CCTGGAGCGGGGCACCGCACTATTCGCCCAGGTGCAGCGGG < 41bp 0.486624357098782 0.84452385156175 0.3645994 0.5687137 prediction 0.689047703123499 Functional Gain - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48559684 chr17:48559685 synonymous SNV . 0 22 hPsi_associated_SNPs_23025 0 0 0 0 0 Ribosome 0.438717579338977 0.446539536299963 0.1374274 0 hPsi_site_16749 iPseU_CNN:0.1374274;iRNA_PseU:0 16750 chr20 31805348 31805348 1 + G A OV 31805347 + 31805327 31805367 41 GCAGGTCCCAGACCCTATGATGTGTCCACTCTGGAGGCTCC GCAGGTCCCAGACCCTATGATATGTCCACTCTGGAGGCTCC < 41bp 0.532828742826194 0.877348079904425 0.18786505 0.3804252 prediction 0.689038674156462 Functional Gain - BPIFA3 ENSG00000131059 CDS Human protein_coding chr20:31805347 chr20:31805348 nonsynonymous SNV 0.205 4 22 hPsi_associated_SNPs_23026 0 0 0 0 0 unknown 0.438950832294776 0.437807761047171 0 0 hPsi_site_16750 iPseU_CNN:0;iRNA_PseU:0 16751 chr14 22133839 22133839 1 + G A UCEC 22133838 + 22133818 22133858 41 TGACAGCTACTTCTGTGATGTGCCTCTTGTTATCAAGCTGG TGACAGCTACTTCTGTGATGTACCTCTTGTTATCAAGCTGG < 41bp 0.465682227424012 0.844512195975744 0.13345802 0.46575204 prediction 0.689024391951488 Functional Gain - OR4E2 ENSG00000221977 CDS Human protein_coding chr14:22133838 chr14:22133839 synonymous SNV . 0 22 hPsi_associated_SNPs_23027 0 0 0 0 0 unknown 0.441280791599828 0.438336994504531 0 0 hPsi_site_16751 iPseU_CNN:0;iRNA_PseU:0 16752 chr7 54617553 54617553 1 + C A LUAD 54617552 + 54617532 54617572 41 GAAAGTCCAAGGCAATGACATCTCCCACAAGCTTCAGATTT GAAAGTCCAAGGCAATGACATATCCCACAAGCTTCAGATTT < 41bp 0.49807163506806 0.844510139245812 0.23292932 0.3158036 prediction 0.689020278491623 Functional Gain - VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54617552 chr7:54617553 synonymous SNV . 0 22 hPsi_associated_SNPs_23028 0 0 1 0 1 exosome 0.439282803427371 0.438718735669295 0 0 hPsi_site_16752 iPseU_CNN:0;iRNA_PseU:0 16753 chr20 34144012 34144012 1 + G A LAML 34144011 + 34143991 34144031 41 CCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGG CCAGTACTTTGTGAAGGTGGTACCCACTGTGTACATGAAGG < 41bp 0.468607687557961 0.844501423444661 0.18419835 0.63781536 prediction 0.689002846889322 Functional Gain - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34144011 chr20:34144012 synonymous SNV . 0 22 hPsi_associated_SNPs_23029 0 0 1 0 2 Ribosome 0.438718589926287 0.438718592995632 0.27563072 0 hPsi_site_16753 iPseU_CNN:0.27563072;iRNA_PseU:0 16754 chr11 70279785 70279785 1 + C A UCEC 70279784 + 70279764 70279804 41 TACGATGAGTACGAGAACGATCTGGGGATCACAGCCGTCGC TACGATGAGTACGAGAACGATATGGGGATCACAGCCGTCGC < 41bp 0.515891925614485 0.860389974085273 0.6262746 0.5214843 prediction 0.688996096941575 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70279784 chr11:70279785 nonsynonymous SNV 0.854 2 22 hPsi_associated_SNPs_23030 0 0 1 0 2 Ribosome 0.43936362513853 0.405562974544762 0 0 hPsi_site_16754 iPseU_CNN:0;iRNA_PseU:0 16755 chr9 104314442 104314442 1 + G A PRAD 104314441 + 104314421 104314461 41 AGGCCCTATAAACAGGGAGATGCGCCACCTCATCAGTAGCC AGGCCCTATAAACAGGGAGATACGCCACCTCATCAGTAGCC < 41bp 0.437839704502643 0.844497828409403 0.28886512 0.7683181 prediction 0.688995656818807 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104314441 chr9:104314442 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23031 0 0 1 0 1 nucleus 0.438718596581021 0.43871870169193 0.5366362 0 hPsi_site_16755 iPseU_CNN:0.5366362;iRNA_PseU:0 16756 chr3 49049972 49049972 1 + G A CESC 49049971 + 49049951 49049991 41 AGGGCGTGGGTACCGGGGATTGGGGGTCTCGGCTCTCTGCT AGGGCGTGGGTACCGGGGATTAGGGGTCTCGGCTCTCTGCT < 41bp 0.553421267436563 0.89791345048617 0.41535893 0.6626267 prediction 0.688984366099213 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049971 chr3:49049972 synonymous SNV . 0 22 hPsi_associated_SNPs_23032 0 0 1 0 0 Nucleus 0.43942360480997 0.437690844098179 0.3252534 0 hPsi_site_16756 iPseU_CNN:0.3252534;iRNA_PseU:0 16757 chr3 9517712 9517712 1 + G A LIHC 9517711 + 9517691 9517731 41 ACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGC ACACCGTGGGAGTGGGGGTGTACACCAGTACCGACTCCAGC < 41bp 0.442482643149672 0.844491373406992 0.32186094 0.37084037 prediction 0.688982746813984 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9517711 chr3:9517712 synonymous SNV . 0 22 hPsi_associated_SNPs_23033 0 0 1 0 0 Nucleus 0.438583014083658 0.43693879862448 0 0 hPsi_site_16757 iPseU_CNN:0;iRNA_PseU:0 16758 chr5 125813438 125813438 1 + C A BLCA 125813437 + 125813417 125813457 41 AAGAAAACCAAAACTGCTCTTCTAGTGCCAAACGCCCTGAT AAGAAAACCAAAACTGCTCTTATAGTGCCAAACGCCCTGAT < 41bp 0.511760222316733 0.85624013230453 0.5863671 0.74028945 prediction 0.688959819975593 Functional Gain - GRAMD2B ENSG00000155324 CDS Human protein_coding chr5:125813437 chr5:125813438 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_23034 0 0 0 2 1 Nucleus 0.438718513771376 0.438718405660866 0.3078447 0 hPsi_site_16758 iPseU_CNN:0.3078447;iRNA_PseU:0 16759 chr6 26045824 26045824 1 + G A CESC 26045823 + 26045803 26045843 41 CCAGAAGTCCACCGAGCTGCTGATCCGGAAGCTGCCGTTCC CCAGAAGTCCACCGAGCTGCTAATCCGGAAGCTGCCGTTCC < 41bp 0.464155546677857 0.844478064875839 0.26752672 0.5646179 prediction 0.688956129751677 Functional Gain - HIST1H3C ENSG00000196532 CDS Human other chr6:26045823 chr6:26045824 synonymous SNV . 0 22 hPsi_associated_SNPs_23035 0 0 1 0 0 exosome 0.43871859569348 0.438718594294805 0.1292358 0 hPsi_site_16759 iPseU_CNN:0.1292358;iRNA_PseU:0 16760 chr11 28352005 28352005 1 + G A UCEC 28352004 + 28351984 28352024 41 CTACAGCGATCTACCCATATTGCCACCAAGACTTTCCAGGC CTACAGCGATCTACCCATATTACCACCAAGACTTTCCAGGC < 41bp 0.467861649094167 0.844477341600628 0.31805372 0.3903448 prediction 0.688954683201256 Functional Gain - METTL15 ENSG00000169519 CDS Human protein_coding chr11:28352004 chr11:28352005 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_23036 0 0 0 0 1 Nucleus 0.438718561204202 0.438712656444432 0 0 hPsi_site_16760 iPseU_CNN:0;iRNA_PseU:0 16761 chr10 104416093 104416093 1 + C A KIRP 104416092 + 104416072 104416112 41 CCACCTGAACTCCAAGCTCTTCCTGAACGAAGTGGCCAAGA CCACCTGAACTCCAAGCTCTTACTGAACGAAGTGGCCAAGA < 41bp 0.51440109194794 0.858877839972944 0.28379512 0.6807867 prediction 0.688953496050008 Functional Gain - TRIM8 ENSG00000171206 CDS Human protein_coding chr10:104416092 chr10:104416093 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23037 0 0 0 0 2 Endoplasmic reticulum 0.4387194884524 0.438713673754 0.3615734 0 hPsi_site_16761 iPseU_CNN:0.3615734;iRNA_PseU:0 16762 chr3 33416811 33416811 1 + G A STAD 33416810 + 33416790 33416830 41 ATGAAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGCTA ATGAAGGTGTGGTGCAGATATACAGGGGCTGTCACCGGCTA < 41bp 0.545008040492418 0.889477379472689 0.33861524 0.5884343 prediction 0.688938677960541 Functional Gain - FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33416810 chr3:33416811 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23038 0 0 0 1 1 chromatin 0.438713449297615 0.438762421722621 0.1768686 0 hPsi_site_16762 iPseU_CNN:0.1768686;iRNA_PseU:0 16763 chrX 34961323 34961323 1 + G A SKCM 34961322 + 34961302 34961342 41 AGAGGAAGTGGAAGCCCAGCTGATGACCAAGCATCCCTTGG AGAGGAAGTGGAAGCCCAGCTAATGACCAAGCATCCCTTGG < 41bp 0.456643665760624 0.844467347769787 0.2880624 0.49677598 prediction 0.688934695539574 Functional Gain - FAM47B ENSG00000189132 CDS Human protein_coding chrX:34961322 chrX:34961323 synonymous SNV . 0 22 hPsi_associated_SNPs_23039 0 0 0 0 0 unknown 0.438753420896835 0.438718617549371 0 0 hPsi_site_16763 iPseU_CNN:0;iRNA_PseU:0 16764 chrX 11783626 11783626 1 + C A LIHC 11783625 + 11783605 11783645 41 CCCAGTCCGCCTTTGTTGAATCCATCCACGCCACAGTCCAC CCCAGTCCGCCTTTGTTGAATACATCCACGCCACAGTCCAC < 41bp 0.499026514677572 0.84446098706185 0.33402765 0.7868533 prediction 0.6889219741237 Functional Gain - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11783625 chrX:11783626 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23040 0 0 1 0 1 Cytosol 0.438718595077016 0.438762208006915 0.5737066 0 hPsi_site_16764 iPseU_CNN:0.5737066;iRNA_PseU:0 16765 chrX 150348829 150348829 1 + C A UCEC 150348828 + 150348808 150348848 41 CCCTATCAACGTGCTCACTGTCTTGGTGGCTGTCAGTCCGA CCCTATCAACGTGCTCACTGTATTGGTGGCTGTCAGTCCGA < 41bp 0.48416906104129 0.844459473076688 0.26385826 0.79219985 prediction 0.688918946153376 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150348828 chrX:150348829 synonymous SNV . 0 22 hPsi_associated_SNPs_23041 0 0 0 0 0 exosome 0.438616546364803 0.44088735803202 0.5843997 0 hPsi_site_16765 iPseU_CNN:0.5843997;iRNA_PseU:0 16766 chrX 88008954 88008954 1 + G A LIHC 88008953 + 88008933 88008973 41 TAAAGCGAAAATATATAGCATGTCTTTACCATCCAAATAGT TAAAGCGAAAATATATAGCATATCTTTACCATCCAAATAGT < 41bp 0.470700708622733 0.844457450699608 0.33543384 0.49104598 prediction 0.688914901399216 Functional Gain - CPXCR1 ENSG00000147183 CDS Human protein_coding chrX:88008953 chrX:88008954 nonsynonymous SNV 0.144 0 22 hPsi_associated_SNPs_23042 0 0 0 0 0 unknown 0.438547363180007 0.438027553613174 0 0 hPsi_site_16766 iPseU_CNN:0;iRNA_PseU:0 16767 chr6 150267599 150267599 1 + C A HNSC 150267598 + 150267578 150267618 41 GTTCAGTTTCGATGGGCAGATCTTCCTCCTCTTTGACTCAG GTTCAGTTTCGATGGGCAGATATTCCTCCTCTTTGACTCAG < 41bp 0.500286761857253 0.844732253792545 0.33463645 0.65852475 prediction 0.688890983870584 Functional Gain - ULBP2 ENSG00000131015 CDS Human protein_coding chr6:150267598 chr6:150267599 synonymous SNV . 0 22 hPsi_associated_SNPs_23043 0 0 0 0 1 Endoplasmic reticulum 0.438752471753287 0.438704140741931 0.3170495 0 hPsi_site_16767 iPseU_CNN:0.3170495;iRNA_PseU:0 16768 chr15 68582375 68582375 1 + G A COAD 68582374 + 68582354 68582394 41 ATGACGCCATTGAAAGTAGCTGCCGAAAGCTGTAAAGCTGA ATGACGCCATTGAAAGTAGCTACCGAAAGCTGTAAAGCTGA < 41bp 0.54255679792231 0.886999830973594 0.16092512 0.32940343 prediction 0.688886066102568 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68582374 chr15:68582375 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23044 0 0 1 0 0 Ribosome 0.438827811059718 0.438718854345438 0 0 hPsi_site_16768 iPseU_CNN:0;iRNA_PseU:0 16769 chr4 41984273 41984273 1 + G A LUAD 41984272 + 41984252 41984292 41 GAATCACAGATGCTCCAAGCTGTGCAGTGCTGCTCCCAGCG GAATCACAGATGCTCCAAGCTATGCAGTGCTGCTCCCAGCG < 41bp 0.536089884211189 0.880529115227419 0.3697409 0.56696796 prediction 0.688878462032461 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984272 chr4:41984273 nonsynonymous SNV 0.038 2 22 hPsi_associated_SNPs_23045 0 0 0 0 0 Nucleus 0.438719479120083 0.438703795329426 0.13393592 0 hPsi_site_16769 iPseU_CNN:0.13393592;iRNA_PseU:0 16770 chr6 41021108 41021108 1 + G A rs41273358 41021107 + 41021087 41021127 41 ATGGCCCAGAAGGAAGAGGCTGCTGTGGCCACTGAGGCTGC ATGGCCCAGAAGGAAGAGGCTACTGTGGCCACTGAGGCTGC < 41bp 0.539219803035257 0.883655765595719 0.61299974 0.73969066 prediction 0.688871925120925 Functional Gain - APOBEC2 ENSG00000124701 CDS Human protein_coding chr6:41021107 chr6:41021108 nonsynonymous SNV 0.618 0 22 hPsi_associated_SNPs_23046 0 0 0 0 0 chromatin 0.438722650017072 0.437943731232482 0.25338184 0 hPsi_site_16770 iPseU_CNN:0.25338184;iRNA_PseU:0 16771 chr19 36236834 36236834 1 + G A BLCA 36236833 + 36236813 36236853 41 ACCCGGCCCCAGCGCAGCTATGAACCTGGAGCGAGTGTCCA ACCCGGCCCCAGCGCAGCTATAAACCTGGAGCGAGTGTCCA < 41bp 0.440430882233399 0.844416285578503 0.23708972 0.5861167 prediction 0.688832571157007 Functional Gain - PSENEN ENSG00000188223;ENSG00000205155 CDS Human other chr19:36236833 chr19:36236834 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23047 0 0 1 0 3 Ribosome 0.43871859299188 0.438718592995101 0.1722334 0 hPsi_site_16771 iPseU_CNN:0.1722334;iRNA_PseU:0 16772 chr19 54947308 54947308 1 + G A BLCA 54947307 + 54947287 54947327 41 TGCAGTGGCAGTCGTCTATCTGAGCCCCTCCTCCCGGCTGG TGCAGTGGCAGTCGTCTATCTAAGCCCCTCCTCCCGGCTGG < 41bp 0.537731644398638 0.882145803998137 0.27509117 0.56841695 prediction 0.688828319198998 Functional Gain - TTYH1 ENSG00000167614 CDS Human protein_coding chr19:54947307 chr19:54947308 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23048 0 0 1 1 2 cytosol 0.438672758410204 0.438715033458621 0.1368339 0 hPsi_site_16772 iPseU_CNN:0.1368339;iRNA_PseU:0 16773 chr4 4322678 4322678 1 + G A CESC 4322677 + 4322657 4322697 41 GAAAATTCTGTGGCAGAATTTGATAGCCACTCTGGCGGCTC GAAAATTCTGTGGCAGAATTTAATAGCCACTCTGGCGGCTC < 41bp 0.443378755811502 0.844412928838982 0.19483748 0.63979495 prediction 0.688825857677964 Functional Gain - ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4322677 chr4:4322678 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_23049 0 0 0 0 0 nucleoplasm 0.438718585820513 0.43871840009599 0.2795899 0 hPsi_site_16773 iPseU_CNN:0.2795899;iRNA_PseU:0 16774 chr5 176079746 176079746 1 + C A GBM 176079745 + 176079725 176079765 41 TCTGTATGCCCAACCCCAGTTCTCCGTGTTCCTCGGTCTCA TCTGTATGCCCAACCCCAGTTATCCGTGTTCCTCGGTCTCA < 41bp 0.503814835350598 0.848225216610581 0.19285315 0.35229635 prediction 0.688820762519967 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176079745 chr5:176079746 nonsynonymous SNV 0.940 3 22 hPsi_associated_SNPs_23050 0 0 1 0 1 Endoplasmic reticulum 0.437077645261971 0.438723116448445 0 0 hPsi_site_16774 iPseU_CNN:0;iRNA_PseU:0 16775 chr1 1425767 1425767 1 + G A CESC 1425766 + 1425746 1425786 41 CGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCC CGCCTGGTGAGACTGCATTTTAACAACTGTGTTCTTAAGCC < 41bp 0.43705794757948 0.844408696851985 0.32591647 0.6498087 prediction 0.68881739370397 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1425766 chr1:1425767 nonsynonymous SNV 0.173 2 22 hPsi_associated_SNPs_23051 0 0 1 0 1 Ribosome 0.438736700558123 0.438718616705008 0.2996174 0 hPsi_site_16775 iPseU_CNN:0.2996174;iRNA_PseU:0 16776 chr9 27172710 27172710 1 + G A COAD 27172709 + 27172689 27172729 41 AAGATACTGGAGAATGCATTTGCCCTCCTGGGTTTATGGGA AAGATACTGGAGAATGCATTTACCCTCCTGGGTTTATGGGA < 41bp 0.439179344042531 0.844406425490412 0.26540738 0.32569373 prediction 0.688812850980824 Functional Gain - TEK ENSG00000120156 CDS Human protein_coding chr9:27172709 chr9:27172710 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23052 0 0 0 0 1 nucleoplasm 0.438718592995106 0.438718593012267 0 0 hPsi_site_16776 iPseU_CNN:0;iRNA_PseU:0 16777 chr1 223567522 223567522 1 + G A BRCA 223567521 + 223567501 223567541 41 CTTGGCCTCCAGCAAAGAGATGCGGAGCCCGCACACCCAGG CTTGGCCTCCAGCAAAGAGATACGGAGCCCGCACACCCAGG < 41bp 0.479687489630976 0.844404047757666 0.27863157 0.633273 prediction 0.688808095515332 Functional Gain - CCDC185 ENSG00000178395 CDS Human protein_coding chr1:223567521 chr1:223567522 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23053 0 0 0 0 0 unknown 0.438660338658985 0.438601233219036 0.266546 0 hPsi_site_16777 iPseU_CNN:0.266546;iRNA_PseU:0 16778 chr12 53853069 53853069 1 + C A SKCM 53853068 + 53853048 53853088 41 TTCTGTAGGACATAAGCAGCTCTATGACCAATAGCACAGCT TTCTGTAGGACATAAGCAGCTATATGACCAATAGCACAGCT < 41bp 0.499607903103409 0.844398965069945 0.7915209 0.8203816 prediction 0.68879793013989 Functional Gain - PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53853068 chr12:53853069 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23054 0 0 1 3 0 Cytosol 0.438719569540386 0.438717002666981 0.0577214000000001 0 hPsi_site_16778 iPseU_CNN:0.0577214000000001;iRNA_PseU:0 16779 chr1 159784043 159784043 1 + G A SKCM 159784042 + 159784022 159784062 41 AAAGGGAAAGATGAAGGTGTTGTCTACTCTGTGGTGCATAG AAAGGGAAAGATGAAGGTGTTATCTACTCTGTGGTGCATAG < 41bp 0.534709861016587 0.879105990905214 0.4231284 0.6692474 prediction 0.688792259777255 Functional Gain - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159784042 chr1:159784043 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23055 0 0 0 0 2 exosome 0.437072637271834 0.438721104415357 0.3384948 0 hPsi_site_16779 iPseU_CNN:0.3384948;iRNA_PseU:0 Vitamin B12 levels 16780 chr19 4496327 4496327 1 + C A BRCA 4496326 + 4496306 4496346 41 AATCAGCGAAGAAGCCGCAGTCCTCAAGCACAGAGCCCGCC AATCAGCGAAGAAGCCGCAGTACTCAAGCACAGAGCCCGCC < 41bp 0.512224610239351 0.85660948164062 0.29216406 0.79908025 prediction 0.688769742802539 Functional Gain - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4496326 chr19:4496327 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23056 0 0 1 0 2 unknown 0.438718309856156 0.438718745605474 0.5981605 0 hPsi_site_16780 iPseU_CNN:0.5981605;iRNA_PseU:0 16781 chr3 64084794 64084794 1 + G A UCEC 64084793 + 64084773 64084813 41 AACTGTCCTCTGCCACCTAATGTGGAAGATTTGGGGAGGCC AACTGTCCTCTGCCACCTAATATGGAAGATTTGGGGAGGCC < 41bp 0.471930559647241 0.844377272442365 0.2516918 0.2748381 prediction 0.68875454488473 Functional Gain - PRICKLE2 ENSG00000163637 CDS Human protein_coding chr3:64084793 chr3:64084794 nonsynonymous SNV 0.354 2 22 hPsi_associated_SNPs_23057 0 0 0 0 0 Endoplasmic reticulum 0.438462756890605 0.438692202370133 0 0 hPsi_site_16781 iPseU_CNN:0;iRNA_PseU:0 16782 chrX 18622549 18622549 1 + C A LGG 18622548 + 18622528 18622568 41 CCAAGTCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAATT CCAAGTCTGTGAGCAACCTTTATGAAGCCAGGGCCCAAATT < 41bp 0.514494462365493 0.858863348125901 0.6184063 0.78567743 prediction 0.688737771520816 Functional Gain - CDKL5 ENSG00000008086 CDS Human protein_coding chrX:18622548 chrX:18622549 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_23058 0 0 0 0 0 Endoplasmic reticulum 0.438718592984667 0.438718569280042 0.33454226 0 hPsi_site_16782 iPseU_CNN:0.33454226;iRNA_PseU:0 16783 chr1 202097095 202097095 1 + G A BLCA 202097094 + 202097074 202097114 41 CCATGGGCACCCTGGACTCATGCATCATGAAACCCTCAGCC CCATGGGCACCCTGGACTCATACATCATGAAACCCTCAGCC < 41bp 0.547818017881263 0.892184756507795 0.2771889 0.44644198 prediction 0.688733477253064 Functional Gain - GPR37L1 ENSG00000170075 CDS Human protein_coding chr1:202097094 chr1:202097095 nonsynonymous SNV 0.921 4 22 hPsi_associated_SNPs_23059 0 0 0 0 0 Nucleus 0.438720187024368 0.438710662255172 0 0 hPsi_site_16783 iPseU_CNN:0;iRNA_PseU:0 16784 chr9 137987784 137987784 1 + G A LUSC 137987783 + 137987763 137987803 41 CTTGCAGTACGTGGAGAAGATGGAGAACCAAATGAAAGGAC CTTGCAGTACGTGGAGAAGATAGAGAACCAAATGAAAGGAC < 41bp 0.479640123136425 0.844365005386587 0.29038754 0.4994834 prediction 0.688730010773174 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137987783 chr9:137987784 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23060 0 0 1 0 2 Endoplasmic reticulum 0.438718583324819 0.438718590635342 0 0 hPsi_site_16784 iPseU_CNN:0;iRNA_PseU:0 Multiple complex diseases 16785 chr16 68721498 68721498 1 + C A LIHC 68721497 + 68721477 68721517 41 GGCCCAGTCCCTGAGCCCCGTCAGATCACCATCTGCAACCA GGCCCAGTCCCTGAGCCCCGTAAGATCACCATCTGCAACCA < 41bp 0.517032896059648 0.861392898255909 0.26784664 0.60760695 prediction 0.68872000439252 Functional Gain - CDH3 ENSG00000062038 CDS Human protein_coding chr16:68721497 chr16:68721498 nonsynonymous SNV 0.227 0 22 hPsi_associated_SNPs_23061 0 0 0 0 1 Endoplasmic reticulum 0.438471263211045 0.438710283352757 0.2152139 0 hPsi_site_16785 iPseU_CNN:0.2152139;iRNA_PseU:0 16786 chr1 120278035 120278035 1 + G A UCEC 120278034 + 120278014 120278054 41 GGGCCCTGCAGTCTGGCCAGTGTGCCGGGGCTGCACTGGAC GGGCCCTGCAGTCTGGCCAGTATGCCGGGGCTGCACTGGAC < 41bp 0.436177887720001 0.84435691179563 0.25940472 0.5884066 prediction 0.68871382359126 Functional Gain - PHGDH ENSG00000092621 CDS Human protein_coding chr1:120278034 chr1:120278035 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23062 0 0 1 0 1 Ribosome 0.438718592995102 0.438718592995102 0.1768132 0 hPsi_site_16786 iPseU_CNN:0.1768132;iRNA_PseU:0 16787 chr1 26751952 26751952 1 + G A UCEC 26751951 + 26751931 26751971 41 GCGGCCAAAAGGAAAGAGCATGCAGAAGCGCAGATCAAAAG GCGGCCAAAAGGAAAGAGCATACAGAAGCGCAGATCAAAAG < 41bp 0.443499220035266 0.844356316565569 0.33010498 0.6435448 prediction 0.688712633131138 Functional Gain - LIN28A ENSG00000131914 CDS Human protein_coding chr1:26751951 chr1:26751952 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23063 0 0 0 1 1 Nucleus 0.438717698059109 0.438710988186041 0.2870896 0 hPsi_site_16787 iPseU_CNN:0.2870896;iRNA_PseU:0 16788 chr19 55494170 55494170 1 + C A LUAD 55494169 + 55494149 55494189 41 GGAGGACAGGAGGGCCTATTTCCTGAGACACTTTGGAGACG GGAGGACAGGAGGGCCTATTTACTGAGACACTTTGGAGACG < 41bp 0.482985493051304 0.844345921775785 0.33621913 0.50784314 prediction 0.688691843551569 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494169 chr19:55494170 nonsynonymous SNV 0.710 3 22 hPsi_associated_SNPs_23064 0 0 0 0 0 Cytosol 0.438718592995113 0.438718592957824 0.0156862799999999 0 hPsi_site_16788 iPseU_CNN:0.0156862799999999;iRNA_PseU:0 16789 chr22 21363227 21363227 1 + G A UCEC 21363226 + 21363206 21363246 41 GTCACACTTGACCATCTGATTGGCTGGCTCGAAGCGGGCAC GTCACACTTGACCATCTGATTAGCTGGCTCGAAGCGGGCAC < 41bp 0.486246981131229 0.844338207452216 0.37074587 0.714614 prediction 0.688676414904432 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363226 chr22:21363227 . . 0 22 hPsi_associated_SNPs_23065 0 0 0 0 0 unknown 0.438704176988605 0.439378022093157 0.429228 0 hPsi_site_16789 iPseU_CNN:0.429228;iRNA_PseU:0 16790 chr9 140057390 140057390 1 + G A LIHC 140057389 + 140057369 140057409 41 CCAGGTGGAGCTGAGCACCATGTACCGGCATATGGAGAAGC CCAGGTGGAGCTGAGCACCATATACCGGCATATGGAGAAGC < 41bp 0.445869301887812 0.844334693259512 0.1379247 0.19876787 prediction 0.688669386519024 Functional Gain - GRIN1 ENSG00000176884 CDS Human protein_coding chr9:140057389 chr9:140057390 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23066 0 0 0 0 2 exosome 0.439704486232481 0.438807535986395 0 0 hPsi_site_16790 iPseU_CNN:0;iRNA_PseU:0 16791 chr5 139060694 139060694 1 + G A LIHC 139060693 + 139060673 139060713 41 GGCCTGCCTGACATGGAGGCTGTGGCAGGTGCCGAAGCCCT GGCCTGCCTGACATGGAGGCTATGGCAGGTGCCGAAGCCCT < 41bp 0.547397227212447 0.891725911698922 0.20161769 0.32515594 prediction 0.688657368972949 Functional Gain - CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060693 chr5:139060694 nonsynonymous SNV 0.980 2 22 hPsi_associated_SNPs_23067 0 0 1 0 0 Ribosome 0.438867481838756 0.438755736033718 0 0 hPsi_site_16791 iPseU_CNN:0;iRNA_PseU:0 16792 chr1 117297297 117297297 1 + G A UCEC 117297296 + 117297276 117297316 41 AATGCCTTGGAAACCTGGGGTGCCTTGGGTCAGGACATCAA AATGCCTTGGAAACCTGGGGTACCTTGGGTCAGGACATCAA < 41bp 0.532826264796305 0.877154471113914 0.22348037 0.34430122 prediction 0.688656412635217 Functional Gain - CD2 ENSG00000116824 CDS Human protein_coding chr1:117297296 chr1:117297297 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_23068 0 0 0 0 1 exosome 0.438718591898688 0.43871859311709 0 0 hPsi_site_16792 iPseU_CNN:0;iRNA_PseU:0 16793 chr7 150269720 150269720 1 + G A COAD 150269719 + 150269699 150269739 41 ATTTTCGGTGACCGCTACTGTGCGTTAAACAACAAGGCAAC ATTTTCGGTGACCGCTACTGTACGTTAAACAACAAGGCAAC < 41bp 0.458268363847162 0.844311359421395 0.5688012 0.7984685 prediction 0.688622718842791 Functional Gain - GIMAP4 ENSG00000133574 CDS Human protein_coding chr7:150269719 chr7:150269720 nonsynonymous SNV 0.108 0 22 hPsi_associated_SNPs_23069 0 0 0 0 0 exosome 0.438720335828161 0.438680613562966 0.4593346 0 hPsi_site_16793 iPseU_CNN:0.4593346;iRNA_PseU:0 16794 chr5 156819960 156819960 1 + G A COAD 156819959 + 156819939 156819979 41 CAGTTCCACTGTGGAGCATGTGCGCTGCTTCCAGCCACCCA CAGTTCCACTGTGGAGCATGTACGCTGCTTCCAGCCACCCA < 41bp 0.54017557777876 0.884480328010529 0.62192523 0.7827521 prediction 0.688609500463538 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156819959 chr5:156819960 synonymous SNV . 0 22 hPsi_associated_SNPs_23070 0 0 1 0 0 Cytosol 0.438814136054464 0.438711565744788 0.32165374 0 hPsi_site_16794 iPseU_CNN:0.32165374;iRNA_PseU:0 16795 chr2 219501030 219501030 1 + G A GBM 219501029 + 219501009 219501049 41 GGTGCCTGAACTTGCCATGCTGCGTTTTGTGGTAATGGATT GGTGCCTGAACTTGCCATGCTACGTTTTGTGGTAATGGATT < 41bp 0.444147983936627 0.844303040577225 0.25675675 0.49173638 prediction 0.68860608115445 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219501029 chr2:219501030 synonymous SNV . 0 22 hPsi_associated_SNPs_23071 0 0 0 0 2 chromatin 0.438012100206931 0.43860982997603 0 0 hPsi_site_16795 iPseU_CNN:0;iRNA_PseU:0 16796 chr16 30092586 30092586 1 + C A UCEC 30092585 + 30092565 30092605 41 TTCTCCTGTCTCCAGAGAGATCTTGGTAGAGGAGAGCAACG TTCTCCTGTCTCCAGAGAGATATTGGTAGAGGAGAGCAACG < 41bp 0.499878766013944 0.844302075573944 0.27062568 0.3574462 prediction 0.688604151147888 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30092585 chr16:30092586 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23072 0 0 1 0 2 Ribosome 0.438648317451424 0.438848823339339 0 0 hPsi_site_16796 iPseU_CNN:0;iRNA_PseU:0 16797 chr11 76507546 76507546 1 + G A HNSC 76507545 + 76507525 76507565 41 ACCAACCTGGTGCCCCTGCCTGAGGCGCTGCTCCTCCACCT ACCAACCTGGTGCCCCTGCCTAAGGCGCTGCTCCTCCACCT < 41bp 0.451790824266569 0.844277337264467 0.36192262 0.7755757 prediction 0.688554674528934 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507545 chr11:76507546 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_23073 0 0 1 0 0 Endoplasmic reticulum 0.438719201989065 0.438716181251269 0.5511514 0 hPsi_site_16797 iPseU_CNN:0.5511514;iRNA_PseU:0 16798 chr19 12779345 12779345 1 + C T BLCA 12779346 - 12779326 12779366 41 GGAGGACACGAAGCAAATGATGAGTAGCTTCATGTGAGACT GGAGGACACGAAGCAAATGATAAGTAGCTTCATGTGAGACT < 41bp 0.456771035193457 0.844266226748286 0.266495 0.3829254 prediction 0.688532453496572 Functional Gain - WDR83OS ENSG00000105583 CDS Human protein_coding chr19:12779346 chr19:12779345 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23074 0 0 1 0 2 Ribosome 0.438394154419862 0.438716573931161 0 0 hPsi_site_16798 iPseU_CNN:0;iRNA_PseU:0 16799 chr1 152286001 152286001 1 + G A LUSC 152286000 + 152285980 152286020 41 CGTTCCCCTGACCGGCCACGTGTGGACTCTTGGTGGCTCTG CGTTCCCCTGACCGGCCACGTATGGACTCTTGGTGGCTCTG < 41bp 0.51851407690167 0.86277541643074 0.60328865 0.56918585 prediction 0.688522679058139 Functional Gain - FLG ENSG00000143631 CDS Human protein_coding chr1:152286000 chr1:152286001 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_23075 0 0 0 0 0 exosome 0.439455134257754 0.439080377657757 0 0 hPsi_site_16799 iPseU_CNN:0;iRNA_PseU:0 16800 chr7 154862852 154862852 1 + C T SKCM 154862853 - 154862833 154862873 41 CAGGACATCCGAGACGGCCATGGATGCCACCAGGTTGTGGG CAGGACATCCGAGACGGCCATAGATGCCACCAGGTTGTGGG < 41bp 0.457183307901042 0.844245818736183 0.24521896 0.61829436 prediction 0.688491637472367 Functional Gain - HTR5A ENSG00000157219;ENSG00000220575 CDS Human other chr7:154862853 chr7:154862852 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23076 0 0 0 0 0 exosome 0.438451612078179 0.438755808604113 0.23658872 0 hPsi_site_16800 iPseU_CNN:0.23658872;iRNA_PseU:0 16801 chr9 32784568 32784568 1 + G A rs138801007 32784567 + 32784547 32784587 41 CCCACAAAGCCAGGGTGAGGTGTCCGTGGCCAGCTCCATCA CCCACAAAGCCAGGGTGAGGTATCCGTGGCCAGCTCCATCA < 41bp 0.453900133899562 0.844244282831177 0.27556285 0.6258429 prediction 0.688488565662353 Functional Gain - TMEM215 ENSG00000188133 CDS Human protein_coding chr9:32784567 chr9:32784568 synonymous SNV . 0 22 hPsi_associated_SNPs_23077 0 0 0 0 0 exosome 0.438732097546314 0.438723871243265 0.2516858 0 hPsi_site_16801 iPseU_CNN:0.2516858;iRNA_PseU:0 16802 chr14 55817747 55817747 1 + C A GBM 55817746 + 55817726 55817766 41 AGTTATACAGATGGTTGCCTTCTTGGAGCAAAGAGCCAGTG AGTTATACAGATGGTTGCCTTATTGGAGCAAAGAGCCAGTG < 41bp 0.49617779517943 0.844244280175105 0.2855187 0.49641728 prediction 0.68848856035021 Functional Gain - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55817746 chr14:55817747 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_23078 0 0 0 0 0 Nucleus 0.438716561480737 0.438683251452733 0 0 hPsi_site_16802 iPseU_CNN:0;iRNA_PseU:0 16803 chr6 74124323 74124323 1 + C A LUSC 74124322 + 74124302 74124342 41 AGCCTCTAGAGGACTTGATGTCCATGACGTTACACATGTCT AGCCTCTAGAGGACTTGATGTACATGACGTTACACATGTCT < 41bp 0.500372288155851 0.844612492298356 0.22344366 0.36888823 prediction 0.68848040828501 Functional Gain - DDX43 ENSG00000080007 CDS Human protein_coding chr6:74124322 chr6:74124323 synonymous SNV . 0 22 hPsi_associated_SNPs_23079 0 0 0 0 1 exosome 0.439014565550763 0.438842174417146 0 0 hPsi_site_16803 iPseU_CNN:0;iRNA_PseU:0 16804 chr11 130341127 130341127 1 + C A OV 130341126 + 130341106 130341146 41 GTGGACGGCACGCTGTGCTCTCCTGACTCCACCTCCGTCTG GTGGACGGCACGCTGTGCTCTACTGACTCCACCTCCGTCTG < 41bp 0.519082517303865 0.863321914839364 0.307684 0.7643373 prediction 0.688478795070997 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130341126 chr11:130341127 nonsynonymous SNV 0.556 1 22 hPsi_associated_SNPs_23080 0 0 0 0 1 exosome 0.438286278857924 0.438509738548852 0.5286746 0 hPsi_site_16804 iPseU_CNN:0.5286746;iRNA_PseU:0 16805 chr1 228005092 228005092 1 + C A rs151061632 228005091 + 228005071 228005111 41 CCCGCATTGTGTTTTCTGAGTCCGTGCTCCCGGTTTGCCTT CCCGCATTGTGTTTTCTGAGTACGTGCTCCCGGTTTGCCTT < 41bp 0.508188017893425 0.852427002067745 0.26888227 0.47510165 prediction 0.68847796834864 Functional Gain - PRSS38 ENSG00000185888 CDS Human protein_coding chr1:228005091 chr1:228005092 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_23081 0 0 0 0 1 unknown 0.438718593258574 0.438642126167243 0 0 hPsi_site_16805 iPseU_CNN:0;iRNA_PseU:0 16806 chr7 100210447 100210447 1 + G A SKCM 100210446 + 100210426 100210466 41 GGCGCCCCAGGACCAGGAGCTGGTGGGTCCGGGGCCCCCTG GGCGCCCCAGGACCAGGAGCTAGTGGGTCCGGGGCCCCCTG < 41bp 0.465940544803584 0.844235023689005 0.32836014 0.53890544 prediction 0.68847004737801 Functional Gain - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210446 chr7:100210447 synonymous SNV . 0 22 hPsi_associated_SNPs_23082 0 0 1 0 1 Cytosol 0.438721181435362 0.438718592997127 0.0778108799999999 0 hPsi_site_16806 iPseU_CNN:0.0778108799999999;iRNA_PseU:0 16807 chr17 33977553 33977553 1 + C A BLCA 33977552 + 33977532 33977572 41 CTTTGCCTTTTCTTTAGGATTCTGATAATCCTGACCTTCGA CTTTGCCTTTTCTTTAGGATTATGATAATCCTGACCTTCGA < 41bp 0.49567593136644 0.844231865210598 0.36166072 0.473688 prediction 0.688463730421196 Functional Gain - AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33977552 chr17:33977553 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23083 0 0 0 0 1 Cytosol 0.438718594775564 0.43871982030166 0 0 hPsi_site_16807 iPseU_CNN:0;iRNA_PseU:0 16808 chr12 57389842 57389842 1 + G A UCEC 57389841 + 57389821 57389861 41 GACCCTGCTGCTGCTCACACTGCATGGGACCCACATCTCCC GACCCTGCTGCTGCTCACACTACATGGGACCCACATCTCCC < 41bp 0.549740342398729 0.893968776896776 0.22632885 0.38999125 prediction 0.688456868996094 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389841 chr12:57389842 synonymous SNV . 0 22 hPsi_associated_SNPs_23084 0 0 0 0 0 nucleus 0.438719577249458 0.438733288635433 0 0 hPsi_site_16808 iPseU_CNN:0;iRNA_PseU:0 16809 chr22 50962832 50962832 1 + C T LUAD 50962833 - 50962813 50962853 41 GAGCATCAGATCCATGCTGCTGCTGACTCGGAGCCCCACAG GAGCATCAGATCCATGCTGCTACTGACTCGGAGCCCCACAG < 41bp 0.46931733039945 0.844226953680241 0.28945458 0.60663027 prediction 0.688453907360483 Functional Gain - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962833 chr22:50962832 synonymous SNV . 0 22 hPsi_associated_SNPs_23085 0 0 1 0 1 Ribosome 0.438528110073256 0.438875120123071 0.21326054 0 hPsi_site_16809 iPseU_CNN:0.21326054;iRNA_PseU:0 16810 chr15 90320491 90320491 1 + G A COAD 90320490 + 90320470 90320510 41 GACGGCGGCCCCAGCAACTTTGGAGCTGGCCGCAGTGTACC GACGGCGGCCCCAGCAACTTTAGAGCTGGCCGCAGTGTACC < 41bp 0.529003166425378 0.873225436047737 0.14972982 0.30254894 prediction 0.688444539244719 Functional Gain - MESP2 ENSG00000188095 CDS Human protein_coding chr15:90320490 chr15:90320491 synonymous SNV . 0 22 hPsi_associated_SNPs_23086 0 0 0 0 1 exosome 0.438718592995102 0.438718603712445 0 0 hPsi_site_16810 iPseU_CNN:0;iRNA_PseU:0 16811 chr19 57133420 57133420 1 + G A UCEC 57133419 + 57133399 57133439 41 CAAGGCCTTCAGCCAGAACATGCACCTCATCGTGCACCAGC CAAGGCCTTCAGCCAGAACATACACCTCATCGTGCACCAGC < 41bp 0.440493958572313 0.844218554287788 0.5486868 0.89151126 prediction 0.688437108575575 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133419 chr19:57133420 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23087 0 0 0 0 0 exosome 0.437380399926196 0.42939398786447 0.68564892 0 hPsi_site_16811 iPseU_CNN:0.68564892;iRNA_PseU:0 16812 chr17 40837272 40837272 1 + C A SKCM 40837271 + 40837251 40837291 41 TTTCGACGGCGACGATGCCATCTCCTACCGCTTCCCGCGAG TTTCGACGGCGACGATGCCATATCCTACCGCTTCCCGCGAG < 41bp 0.48356849451214 0.844214439782035 0.55096084 0.733416 prediction 0.688428879564071 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40837271 chr17:40837272 synonymous SNV . 0 22 hPsi_associated_SNPs_23088 0 0 1 0 1 Cytosol 0.438719361436942 0.438645108250989 0.36491032 0 hPsi_site_16812 iPseU_CNN:0.36491032;iRNA_PseU:0 16813 chr17 46198876 46198876 1 + G A rs3744346 46198875 + 46198855 46198895 41 AGTTTTGGAAAAGTGAGCTCTGGGTTCTGCTCTGAGATGGT AGTTTTGGAAAAGTGAGCTCTAGGTTCTGCTCTGAGATGGT < 41bp 0.458299795250051 0.844213050520246 0.40153006 0.69272655 prediction 0.688426101040493 Functional Gain - SNX11 ENSG00000002919 UTR3 Human protein_coding chr17:46198875 chr17:46198876 . . 0 22 hPsi_associated_SNPs_23089 0 0 1 0 0 Cytosol 0.438883199398631 0.438704499547137 0.3854531 0 hPsi_site_16813 iPseU_CNN:0.3854531;iRNA_PseU:0 16814 chr11 63064818 63064818 1 + G A LGG 63064817 + 63064797 63064837 41 AGATGGTGTTTGCTCCAGCTTGCCATTACTGACACCTGCGC AGATGGTGTTTGCTCCAGCTTACCATTACTGACACCTGCGC < 41bp 0.451757762887882 0.844207775500961 0.1691837 0.23473752 prediction 0.688415551001923 Functional Gain - SLC22A10 ENSG00000184999 CDS Human protein_coding chr11:63064817 chr11:63064818 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_23090 0 0 0 0 1 exosome 0.438717114090294 0.438714152783484 0 0 hPsi_site_16814 iPseU_CNN:0;iRNA_PseU:0 16815 chr11 65825531 65825531 1 + G A SKCM 65825530 + 65825510 65825550 41 GGGTGTCTCTGGCAGATGGATGACCCCTCTGTGGGCCCCAA GGGTGTCTCTGGCAGATGGATAACCCCTCTGTGGGCCCCAA < 41bp 0.441822724724417 0.84420319382127 0.24732104 0.6530118 prediction 0.68840638764254 Functional Gain - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65825530 chr11:65825531 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23091 0 0 1 0 1 Nucleus 0.438718592948884 0.438718592993662 0.3060236 0 hPsi_site_16815 iPseU_CNN:0.3060236;iRNA_PseU:0 16816 chr3 12859312 12859312 1 + G A rs369417287 12859311 + 12859291 12859331 41 GGGGTGGTGGCCGAGTGCATTGGGAAGCTGGTCCTTGTGAA GGGGTGGTGGCCGAGTGCATTAGGAAGCTGGTCCTTGTGAA < 41bp 0.544322024418272 0.888515720060615 0.2903981 0.35686642 prediction 0.688387391284685 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12859311 chr3:12859312 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_23092 0 0 1 0 1 chromatin 0.438718592995099 0.43850076368335 0 0 hPsi_site_16816 iPseU_CNN:0;iRNA_PseU:0 16817 chr22 39918171 39918171 1 + G A UCEC 39918170 + 39918150 39918190 41 ACGTTGCCATGATCCCTCAGTGCATAAAGGAGGAAGACACC ACGTTGCCATGATCCCTCAGTACATAAAGGAGGAAGACACC < 41bp 0.546620802370901 0.890813322841874 0.26841557 0.5480129 prediction 0.688385040941947 Functional Gain - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918170 chr22:39918171 nonsynonymous SNV 0.713 1 22 hPsi_associated_SNPs_23093 0 0 1 0 0 Ribosome 0.438718552105518 0.438718282834372 0.0960258000000001 0 hPsi_site_16817 iPseU_CNN:0.0960258000000001;iRNA_PseU:0 16818 chr9 98231228 98231228 1 + G T UCEC 98231229 - 98231209 98231249 41 CGCTGAGCCGCGCTCCGAGATCTCTGTGCAGCCCGTCACCG CGCTGAGCCGCGCTCCGAGATATCTGTGCAGCCCGTCACCG < 41bp 0.501135521757145 0.84532708732373 0.6700181 0.82924044 prediction 0.688383131133169 Functional Gain - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98231229 chr9:98231228 synonymous SNV . 0 22 hPsi_associated_SNPs_23094 0 0 0 0 0 Endoplasmic reticulum 0.438718591850264 0.438251526465467 0.31844468 0 hPsi_site_16818 iPseU_CNN:0.31844468;iRNA_PseU:0 16819 chr1 27190291 27190291 1 + C T SKCM 27190292 - 27190272 27190312 41 AGCCATGGCCTCGTCGAAAGTGGTCTTGGCCAGAGAGATGG AGCCATGGCCTCGTCGAAAGTAGTCTTGGCCAGAGAGATGG < 41bp 0.510581700797244 0.854772345152781 0.22194281 0.37038726 prediction 0.688381288711074 Functional Gain - SFN ENSG00000175793 CDS Human protein_coding chr1:27190292 chr1:27190291 synonymous SNV . 0 22 hPsi_associated_SNPs_23095 0 0 0 0 0 Ribosome 0.438718592997793 0.438718399882013 0 0 hPsi_site_16819 iPseU_CNN:0;iRNA_PseU:0 16820 chrX 68749634 68749634 1 + G A rs61730420 68749633 + 68749613 68749653 41 CAGCAACAAGCCCGCCCTGCTGCCGGTCTCTGGGGGCTCCC CAGCAACAAGCCCGCCCTGCTACCGGTCTCTGGGGGCTCCC < 41bp 0.532375778931068 0.876562089136479 0.41843513 0.801792 prediction 0.688372620410821 Functional Gain - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68749633 chrX:68749634 synonymous SNV . 0 22 hPsi_associated_SNPs_23096 0 0 0 0 0 exosome 0.438718716128221 0.438794834872475 0.603584 0 hPsi_site_16820 iPseU_CNN:0.603584;iRNA_PseU:0 16821 chrX 49022568 49022568 1 + G A UCEC 49022567 + 49022547 49022587 41 AGTCCAGAGGCGGCCGCCGATGGCCCCACGGTTTCTCCTCC AGTCCAGAGGCGGCCGCCGATAGCCCCACGGTTTCTCCTCC < 41bp 0.470359701818823 0.844178766305791 0.2990058 0.41356003 prediction 0.688357532611581 Functional Gain - MAGIX ENSG00000017621 CDS Human other chrX:49022567 chrX:49022568 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23097 0 0 0 0 0 nucleus 0.438634329469897 0.438693252049694 0 0 hPsi_site_16821 iPseU_CNN:0;iRNA_PseU:0 16822 chr15 75185070 75185070 1 + G A rs150217523 75185069 + 75185049 75185089 41 TGCCAACCACAAGCCAGAGATGGCCATTGCCCTCACCCCCT TGCCAACCACAAGCCAGAGATAGCCATTGCCCTCACCCCCT < 41bp 0.432735778948888 0.844168758814913 0.18612 0.27875918 prediction 0.688337517629826 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75185069 chr15:75185070 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_23098 0 0 1 0 1 Ribosome 0.438718104863911 0.438572348038829 0 0 hPsi_site_16822 iPseU_CNN:0;iRNA_PseU:0 16823 chr3 16254109 16254109 1 + C A BLCA 16254108 + 16254088 16254128 41 GGTGGCTCTGTTGAAATCCTTCCCTGCTCTCGGGTAGGACA GGTGGCTCTGTTGAAATCCTTACCTGCTCTCGGGTAGGACA < 41bp 0.505442233940223 0.849603225305245 0.3335129 0.5284936 prediction 0.688321982730043 Functional Gain - GALNT15 ENSG00000131386 CDS Human protein_coding chr3:16254108 chr3:16254109 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_23099 0 0 0 0 1 exosome 0.438919001769406 0.439590802797597 0.0569872 0 hPsi_site_16823 iPseU_CNN:0.0569872;iRNA_PseU:0 16824 chr14 105856325 105856325 1 + C A GBM 105856324 + 105856304 105856344 41 CGAAGAGTCCTCCCAAAAGTTCATTCCCTTTGTCGGGGTGA CGAAGAGTCCTCCCAAAAGTTAATTCCCTTTGTCGGGGTGA < 41bp 0.498095169670852 0.844158790551799 0.3576474 0.6443578 prediction 0.688317581103597 Functional Gain - PACS2 ENSG00000179364 CDS Human protein_coding chr14:105856324 chr14:105856325 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_23100 0 0 1 0 2 Cytosol 0.439759893625323 0.438719186959961 0.2887156 0 hPsi_site_16824 iPseU_CNN:0.2887156;iRNA_PseU:0 16825 chr3 97888265 97888265 1 + G A LUSC 97888264 + 97888244 97888284 41 TAAGGAAAGCCTTTTCCACCTGTGGAGCCCATCTCTTCTCT TAAGGAAAGCCTTTTCCACCTATGGAGCCCATCTCTTCTCT < 41bp 0.508651820805414 0.852801017232775 0.30574727 0.5931641 prediction 0.688298392854721 Functional Gain - OR5H15 ENSG00000233412 CDS Human protein_coding chr3:97888264 chr3:97888265 nonsynonymous SNV 0.596 4 22 hPsi_associated_SNPs_23101 0 0 0 0 0 unknown 0.438718593117257 0.438718592993366 0.1863282 0 hPsi_site_16825 iPseU_CNN:0.1863282;iRNA_PseU:0 16826 chr11 74911347 74911347 1 + C A LUSC 74911346 + 74911326 74911366 41 TGCGACTCAACGTGCAGCCATCTGGTGGTGCCCTTCCTGCT TGCGACTCAACGTGCAGCCATATGGTGGTGCCCTTCCTGCT < 41bp 0.492956962929943 0.844148713528572 0.36062717 0.4049982 prediction 0.688297427057144 Functional Gain - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74911346 chr11:74911347 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_23102 0 0 1 0 2 cytosol 0.438723005691853 0.438966007385144 0 0 hPsi_site_16826 iPseU_CNN:0;iRNA_PseU:0 16827 chr10 6257242 6257242 1 + C A UCEC 6257241 + 6257221 6257261 41 GCAGTACAGCTCCTACAACTTCTTCCGCCCCGACAATGAGG GCAGTACAGCTCCTACAACTTATTCCGCCCCGACAATGAGG < 41bp 0.505430538489765 0.849577866897466 0.28143248 0.45945004 prediction 0.688294656815402 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6257241 chr10:6257242 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23103 0 0 1 0 1 Ribosome 0.438718592994969 0.438718593560702 0 0 hPsi_site_16827 iPseU_CNN:0;iRNA_PseU:0 16828 chr5 175306002 175306002 1 + G A LUAD 175306001 + 175305981 175306021 41 GGAGGAGCGGCAGGAGGCGCTGCGGCAGCAGGAGGAGGAGC GGAGGAGCGGCAGGAGGCGCTACGGCAGCAGGAGGAGGAGC < 41bp 0.437120331139649 0.844143401495648 0.2375983 0.3182298 prediction 0.688286802991295 Functional Gain - CPLX2 ENSG00000145920 CDS Human protein_coding chr5:175306001 chr5:175306002 synonymous SNV . 0 22 hPsi_associated_SNPs_23104 0 0 1 0 2 insoluble cytoplasm 0.438718656646534 0.438718592940685 0 0 hPsi_site_16828 iPseU_CNN:0;iRNA_PseU:0 16829 chr2 97217112 97217112 1 + G A SKCM 97217111 + 97217091 97217131 41 CAGGAGGAGGGCTGCCGCCATGGGGCAGAGCCCCAGGCGTC CAGGAGGAGGGCTGCCGCCATAGGGCAGAGCCCCAGGCGTC < 41bp 0.439667571224599 0.84413438481888 0.24521938 0.3922835 prediction 0.688268769637761 Functional Gain - ARID5A ENSG00000196843 CDS Human protein_coding chr2:97217111 chr2:97217112 nonsynonymous SNV 0.545 1 22 hPsi_associated_SNPs_23105 0 0 1 0 0 Cytosol 0.438717614918217 0.438718588305376 0 0 hPsi_site_16829 iPseU_CNN:0;iRNA_PseU:0 16830 chr12 111318977 111318977 1 + C A UCEC 111318976 + 111318956 111318996 41 CGCCAGAAGAAGGACACCTCTCAGTACAACCTGGAGATCCG CGCCAGAAGAAGGACACCTCTAAGTACAACCTGGAGATCCG < 41bp 0.48252364567231 0.844133747981605 0.20591256 0.2537443 prediction 0.68826749596321 Functional Gain - CCDC63 ENSG00000173093 CDS Human protein_coding chr12:111318976 chr12:111318977 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_23106 0 0 0 0 0 exosome 0.438652095367326 0.438718119691627 0 0 hPsi_site_16830 iPseU_CNN:0;iRNA_PseU:0 16831 chr16 3071954 3071954 1 + G A CESC 3071953 + 3071933 3071973 41 ACAAGGGGGGTGGGGGGCGGTGAATCACCTCTGAGGCCTGG ACAAGGGGGGTGGGGGGCGGTAAATCACCTCTGAGGCCTGG < 41bp 0.527027625358933 0.871160356491705 0.6359192 0.84767056 prediction 0.688265462265542 Functional Gain - TNFRSF12A ENSG00000006327 CDS Human protein_coding chr16:3071953 chr16:3071954 synonymous SNV . 0 22 hPsi_associated_SNPs_23107 0 0 1 0 0 Ribosome 0.438722379356748 0.438727250775059 0.42350272 0 hPsi_site_16831 iPseU_CNN:0.42350272;iRNA_PseU:0 16832 chr11 5906247 5906247 1 + G A LUAD 5906246 + 5906226 5906266 41 GACTAAAGGCCTTCAATACCTGTGGTTCTCATGTCTGTGTT GACTAAAGGCCTTCAATACCTATGGTTCTCATGTCTGTGTT < 41bp 0.520897325457215 0.865019211162125 0.25827232 0.31011695 prediction 0.68824377140982 Functional Gain - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5906246 chr11:5906247 nonsynonymous SNV 0.527 2 22 hPsi_associated_SNPs_23108 0 0 0 0 0 unknown 0.4387185929954 0.438718592995102 0 0 hPsi_site_16832 iPseU_CNN:0;iRNA_PseU:0 16833 chr2 3481508 3481508 1 + G A CESC 3481507 + 3481487 3481527 41 GAAAAGTATTTTCAAGACGTTGAGAAAGTAACACAGAAATT GAAAAGTATTTTCAAGACGTTAAGAAAGTAACACAGAAATT < 41bp 0.470788887699994 0.844113925739289 0.31051758 0.6937753 prediction 0.688227851478578 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3481507 chr2:3481508 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_23109 0 0 1 0 2 Ribosome 0.432288069203806 0.436624307822368 0.3875506 0 hPsi_site_16833 iPseU_CNN:0.3875506;iRNA_PseU:0 16834 chr16 1130708 1130708 1 + G A rs559805230 1130707 + 1130687 1130727 41 CGGCTGGTGCAGAGGAGAGCTGGGGGCTGAGGTTGGGGTGA CGGCTGGTGCAGAGGAGAGCTAGGGGCTGAGGTTGGGGTGA < 41bp 0.498389418053825 0.844111677614261 0.20244685 0.34729117 prediction 0.688223355228523 Functional Gain - SSTR5 ENSG00000162009 UTR3 Human protein_coding chr16:1130707 chr16:1130708 . . 0 22 hPsi_associated_SNPs_23110 0 0 0 0 0 exosome 0.438916273274391 0.44026811331553 0 0 hPsi_site_16834 iPseU_CNN:0;iRNA_PseU:0 16835 chr3 126137483 126137483 1 + C A UCEC 126137482 + 126137462 126137502 41 GGATGTCAAGCGGAGAGAGATCCAGCGGCTGGAGACGCTGG GGATGTCAAGCGGAGAGAGATACAGCGGCTGGAGACGCTGG < 41bp 0.497441229476938 0.844106793632156 0.34192502 0.36566544 prediction 0.688213587264311 Functional Gain - CFAP100 ENSG00000163885 CDS Human protein_coding chr3:126137482 chr3:126137483 synonymous SNV . 0 22 hPsi_associated_SNPs_23111 0 0 0 0 1 nucleus 0.438718676981031 0.438717876158437 0 0 hPsi_site_16835 iPseU_CNN:0;iRNA_PseU:0 16836 chr15 90903711 90903711 1 + C A BLCA 90903710 + 90903690 90903730 41 CAAGGGGTGTGAGAAGAAATTCAGCGACAGCTCAACACTCA CAAGGGGTGTGAGAAGAAATTAAGCGACAGCTCAACACTCA < 41bp 0.497780664782239 0.844105358562108 0.2803483 0.5532927 prediction 0.688210717124216 Functional Gain - ZNF774 ENSG00000196391 CDS Human protein_coding chr15:90903710 chr15:90903711 nonsynonymous SNV 0.929 3 22 hPsi_associated_SNPs_23112 0 0 0 0 0 nucleoplasm 0.438957904468662 0.438749969684768 0.1065854 0 hPsi_site_16836 iPseU_CNN:0.1065854;iRNA_PseU:0 16837 chr11 73670675 73670675 1 + C A COAD 73670674 + 73670654 73670694 41 TGAAAAGGTGTTCCACGAGTTCTTTGGTGGAAACAACCCCT TGAAAAGGTGTTCCACGAGTTATTTGGTGGAAACAACCCCT < 41bp 0.507276810175995 0.851369756362217 0.8844584 0.9460813 prediction 0.688185892372444 Functional Gain - DNAJB13 ENSG00000187726 CDS Human protein_coding chr11:73670674 chr11:73670675 nonsynonymous SNV 0.903 4 22 hPsi_associated_SNPs_23113 0 0 0 0 1 exosome 0.438718592995852 0.438718596538127 0.1232458 0 hPsi_site_16837 iPseU_CNN:0.1232458;iRNA_PseU:0 16838 chr9 84607144 84607144 1 + C A LUAD 84607143 + 84607123 84607163 41 TCCCTGGCTCAACCTCAATCTCCATTCCGAGCCCTACTACC TCCCTGGCTCAACCTCAATCTACATTCCGAGCCCTACTACC < 41bp 0.500592456445277 0.844681341243765 0.6050565 0.72011817 prediction 0.688177769596976 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84607143 chr9:84607144 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_23114 0 0 0 0 0 exosome 0.438718593027416 0.438701514867915 0.23012334 0 hPsi_site_16838 iPseU_CNN:0.23012334;iRNA_PseU:0 16839 chr11 58380293 58380293 1 + G A LAML 58380292 + 58380272 58380312 41 GAAGGATGTGGAACTGTCCTTGCCCATCCTCGCTATTTGCA GAAGGATGTGGAACTGTCCTTACCCATCCTCGCTATTTGCA < 41bp 0.551671677430007 0.895753773314405 0.2834503 0.81520444 prediction 0.688164191768797 Functional Gain - ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58380292 chr11:58380293 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23115 0 0 1 0 2 chromatin 0.438718588912993 0.438718875131155 0.63040888 0 hPsi_site_16839 iPseU_CNN:0.63040888;iRNA_PseU:0 16840 chr19 36370011 36370011 1 + G A rs2227909 36370010 + 36369990 36370030 41 AGGGGTGTCCCGTGAGGCTGTGTCGGGTCTGCTGATCATGG AGGGGTGTCCCGTGAGGCTGTATCGGGTCTGCTGATCATGG < 41bp 0.440351576406016 0.844076347416103 0.30436563 0.6822504 prediction 0.688152694832206 Functional Gain - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370010 chr19:36370011 synonymous SNV . 0 22 hPsi_associated_SNPs_23116 0 0 0 0 1 Endoplasmic reticulum 0.440044807011702 0.43249085690108 0.3645008 0 hPsi_site_16840 iPseU_CNN:0.3645008;iRNA_PseU:0 16841 chr11 15260507 15260507 1 + C A CESC 15260506 + 15260486 15260526 41 TGCTGTCTGAAAAACCAAGGTCTGGGACTCCTGCTGAAGTG TGCTGTCTGAAAAACCAAGGTATGGGACTCCTGCTGAAGTG < 41bp 0.517221336684219 0.861295726656593 0.2517347 0.28026304 prediction 0.688148779944747 Functional Gain - INSC ENSG00000188487 CDS Human protein_coding chr11:15260506 chr11:15260507 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23117 0 0 0 0 1 exosome 0.438718592999024 0.438718592995101 0 0 hPsi_site_16841 iPseU_CNN:0;iRNA_PseU:0 16842 chr10 96967018 96967018 1 + C A KIRP 96967017 + 96966997 96967037 41 ACTGCCAAGAAAATTCGCTATCAATTACGCATGTCTAAGGC ACTGCCAAGAAAATTCGCTATAAATTACGCATGTCTAAGGC < 41bp 0.51242138573377 0.856488798091001 0.34796762 0.41863847 prediction 0.688134824714463 Functional Gain - ACSM6 ENSG00000173124 CDS Human protein_coding chr10:96967017 chr10:96967018 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_23118 0 0 0 0 1 exosome 0.438127017024109 0.429258229172404 0 0 hPsi_site_16842 iPseU_CNN:0;iRNA_PseU:0 16843 chr16 58550743 58550743 1 + G A BLCA 58550742 + 58550722 58550762 41 CCACTGGAGGAAGAAGAGGATGAAAAGGAGCCCAACTCCCC CCACTGGAGGAAGAAGAGGATAAAAAGGAGCCCAACTCCCC < 41bp 0.431986152114817 0.844066812126421 0.542871 0.81433046 prediction 0.688133624252842 Functional Gain - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550742 chr16:58550743 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_23119 0 0 1 0 2 Ribosome 0.438718592995102 0.438718592995102 0.54291892 0 hPsi_site_16843 iPseU_CNN:0.54291892;iRNA_PseU:0 16844 chr7 1026301 1026301 1 + G A LUSC 1026300 + 1026280 1026320 41 GCTCGGGGCCCTGCTCCAGCTGCACCGGCCCGTCCTGCGCA GCTCGGGGCCCTGCTCCAGCTACACCGGCCCGTCCTGCGCA < 41bp 0.545103381621113 0.889169717353644 0.29301494 0.6091909 prediction 0.688132671465062 Functional Gain - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1026300 chr7:1026301 synonymous SNV . 0 22 hPsi_associated_SNPs_23120 0 0 1 0 1 nucleus 0.439448553378413 0.438776463231085 0.2183818 0 hPsi_site_16844 iPseU_CNN:0.2183818;iRNA_PseU:0 16845 chr5 87564804 87564804 1 + G A rs187254968 87564803 + 87564783 87564823 41 AGGTTGTGGGCTGGGGGCGGTGCTGACCTTGAGAGAGCGGA AGGTTGTGGGCTGGGGGCGGTACTGACCTTGAGAGAGCGGA < 41bp 0.5206950571302 0.864752269753293 0.3276524 0.66983217 prediction 0.688114425246185 Functional Gain - TMEM161B-AS1 ENSG00000247828 ncRNA_exonic Human antisense chr5:87564803 chr5:87564804 . . 0 22 hPsi_associated_SNPs_23121 0 0 1 0 1 unknown 0.438718618004982 0.438718607024477 0.33966434 0 hPsi_site_16845 iPseU_CNN:0.33966434;iRNA_PseU:0 16846 chr11 15267491 15267491 1 + G A BLCA 15267490 + 15267470 15267510 41 AGATTGGCTGGGGTCTGCCCTGAAGGCCTCCAGGACTCTGA AGATTGGCTGGGGTCTGCCCTAAAGGCCTCCAGGACTCTGA < 41bp 0.451260826195057 0.844056394761198 0.22128826 0.24928677 prediction 0.688112789522396 Functional Gain - INSC ENSG00000188487 CDS Human protein_coding chr11:15267490 chr11:15267491 nonsynonymous SNV 0.918 1 22 hPsi_associated_SNPs_23122 0 0 0 0 1 exosome 0.438718735325319 0.438723050898951 0 0 hPsi_site_16846 iPseU_CNN:0;iRNA_PseU:0 16847 chr17 6928498 6928498 1 + G A HNSC 6928497 + 6928477 6928517 41 GACACCTCTGGATCACCCTCTGAACGGGCTCGTCCACTACC GACACCTCTGGATCACCCTCTAAACGGGCTCGTCCACTACC < 41bp 0.435013241480493 0.844055578302719 0.33642566 0.657576 prediction 0.688111156605437 Functional Gain - BCL6B ENSG00000161940 CDS Human protein_coding chr17:6928497 chr17:6928498 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_23123 0 0 0 0 1 Endoplasmic reticulum 0.43877346575504 0.438825878767698 0.315152 0 hPsi_site_16847 iPseU_CNN:0.315152;iRNA_PseU:0 16848 chr17 75186987 75186987 1 + G A SKCM 75186986 + 75186966 75187006 41 GATGGGGCTATTCATGTCATTGAAAGGCGCTGCAAGCTGGA GATGGGGCTATTCATGTCATTAAAAGGCGCTGCAAGCTGGA < 41bp 0.542703858623044 0.886740195522663 0.18939328 0.27322495 prediction 0.688072673799239 Functional Gain - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75186986 chr17:75186987 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_23124 0 0 1 0 1 Cytosol 0.43871859304368 0.438723336516237 0 0 hPsi_site_16848 iPseU_CNN:0;iRNA_PseU:0 16849 chr1 153751263 153751263 1 + C A UCEC 153751262 + 153751242 153751282 41 GGGGAAGTTGCTAAAGGATGTCTTCCGGCCTGGGGATGTTT GGGGAAGTTGCTAAAGGATGTATTCCGGCCTGGGGATGTTT < 41bp 0.490084669747426 0.844034500240654 0.32178295 0.85454655 prediction 0.688069000481308 Functional Gain - SLC27A3 ENSG00000143554 CDS Human protein_coding chr1:153751262 chr1:153751263 synonymous SNV . 0 22 hPsi_associated_SNPs_23125 0 0 0 0 1 nucleoplasm 0.438718590718281 0.43871857904464 0.7090931 0 hPsi_site_16849 iPseU_CNN:0.7090931;iRNA_PseU:0 16850 chr1 153941869 153941869 1 + G A BLCA 153941868 + 153941848 153941888 41 ATGGTCAGTGAGCTGCCCTTTGATGCTCATGCCCACATCCT ATGGTCAGTGAGCTGCCCTTTAATGCTCATGCCCACATCCT < 41bp 0.553895309097933 0.897929626677632 0.33955282 0.762522 prediction 0.688068635159397 Functional Gain - CREB3L4 ENSG00000143578 CDS Human protein_coding chr1:153941868 chr1:153941869 nonsynonymous SNV 0.833 0 22 hPsi_associated_SNPs_23126 0 0 0 1 2 exosome 0.438718603761473 0.438718614623921 0.525044 0 hPsi_site_16850 iPseU_CNN:0.525044;iRNA_PseU:0 16851 chr11 64803125 64803125 1 + C A BRCA 64803124 + 64803104 64803144 41 GCTTGCCCTCTTCGACCCCTTCTCCAAGGAAGGTAATGAGC GCTTGCCCTCTTCGACCCCTTATCCAAGGAAGGTAATGAGC < 41bp 0.488350556018672 0.844025731679848 0.2624905 0.32320136 prediction 0.688051463359697 Functional Gain - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64803124 chr11:64803125 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_23127 0 0 1 0 1 Ribosome 0.43871859314477 0.438718592995092 0 0 hPsi_site_16851 iPseU_CNN:0;iRNA_PseU:0 16852 chr2 102984491 102984491 1 + G A SKCM 102984490 + 102984470 102984510 41 GTTTTGGAGTTTTGGCCAGTTGAGTTGAATGACACAGGATC GTTTTGGAGTTTTGGCCAGTTAAGTTGAATGACACAGGATC < 41bp 0.461629836143916 0.844018816920961 0.26828086 0.5030621 prediction 0.688037633841922 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:102984490 chr2:102984491 nonsynonymous SNV 0.941 0 22 hPsi_associated_SNPs_23128 0 0 0 0 1 Nucleus 0.45829096499931 0.450818001262433 0.00612419999999991 0 hPsi_site_16852 iPseU_CNN:0.00612419999999991;iRNA_PseU:0 16853 chr17 80193902 80193902 1 + G A SKCM 80193901 + 80193881 80193921 41 GGCCATGGGAGGGGCCGTGGTGGACGAGGGCCCCACAGGCG GGCCATGGGAGGGGCCGTGGTAGACGAGGGCCCCACAGGCG < 41bp 0.538677300576534 0.882689099968323 0.31211078 0.68478614 prediction 0.688023598783578 Functional Gain - SLC16A3 ENSG00000141526 CDS Human protein_coding chr17:80193901 chr17:80193902 synonymous SNV . 0 22 hPsi_associated_SNPs_23129 0 0 1 0 1 Ribosome 0.437634730510022 0.438718141769598 0.36957228 0 hPsi_site_16853 iPseU_CNN:0.36957228;iRNA_PseU:0 16854 chr19 49901374 49901374 1 + C A COAD 49901373 + 49901353 49901393 41 AGCACGCCTTGGGGAGGAGATCTTGGCTCTGCGTAAGCAGC AGCACGCCTTGGGGAGGAGATATTGGCTCTGCGTAAGCAGC < 41bp 0.505614933463805 0.849610788787396 0.32271394 0.58507925 prediction 0.687991710647182 Functional Gain - CCDC155 ENSG00000161609 CDS Human protein_coding chr19:49901373 chr19:49901374 synonymous SNV . 0 22 hPsi_associated_SNPs_23130 0 0 0 0 1 nucleolus 0.438884527351146 0.438737080148695 0.1701585 0 hPsi_site_16854 iPseU_CNN:0.1701585;iRNA_PseU:0 16855 chr8 13424866 13424866 1 + G A rs75484711 13424865 + 13424845 13424885 41 AGATGAAGAATTGAATGCCCTGCAGTCTTATTGCACCATGA AGATGAAGAATTGAATGCCCTACAGTCTTATTGCACCATGA < 41bp 0.4719731416614 0.843992509796851 0.2912442 0.4330791 prediction 0.687985019593701 Functional Gain - C8orf48 ENSG00000164743 CDS Human protein_coding chr8:13424865 chr8:13424866 synonymous SNV . 0 22 hPsi_associated_SNPs_23131 0 0 0 0 0 exosome 0.438718143298089 0.43871837812284 0 0 hPsi_site_16855 iPseU_CNN:0;iRNA_PseU:0 16856 chr6 73978291 73978291 1 + G A rs145888266 73978290 + 73978270 73978310 41 TTGGACAGGGCGCTGAATGGTGCGTTTACAATCCCTGAGCT TTGGACAGGGCGCTGAATGGTACGTTTACAATCCCTGAGCT < 41bp 0.508518456056898 0.852508261854143 0.41407734 0.8368974 prediction 0.68797961159449 Functional Gain - KHDC1 ENSG00000229852 ncRNA_exonic Human antisense chr6:73978290 chr6:73978291 . . 0 22 hPsi_associated_SNPs_23132 0 0 0 0 0 Cytosol 0.438718200857982 0.438718632832978 0.6737948 0 hPsi_site_16856 iPseU_CNN:0.6737948;iRNA_PseU:0 16857 chr20 47601333 47601333 1 + G A BRCA 47601332 + 47601312 47601352 41 GGCATGCTGGGAACGTCAGTTGAAGACATAGCCCAATTCCT GGCATGCTGGGAACGTCAGTTAAAGACATAGCCCAATTCCT < 41bp 0.547047979955609 0.891033871138486 0.80161035 0.96864116 prediction 0.687971782365753 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47601332 chr20:47601333 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_23133 0 0 0 0 3 Cytosol 0.43872473053348 0.438679293162568 0.33406162 0 hPsi_site_16857 iPseU_CNN:0.33406162;iRNA_PseU:0 16858 chr1 110032952 110032952 1 + G A OV 110032951 + 110032931 110032971 41 CTATGTGTTTAGCCGCCGGCTGGACCGGTTCTGCTCAGCAC CTATGTGTTTAGCCGCCGGCTAGACCGGTTCTGCTCAGCAC < 41bp 0.545277014331231 0.889262897450656 0.25265667 0.4621958 prediction 0.687971766238849 Functional Gain - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110032951 chr1:110032952 synonymous SNV . 0 22 hPsi_associated_SNPs_23134 0 0 1 0 2 nucleoplasm 0.438291327402457 0.442032324573192 0 0 hPsi_site_16858 iPseU_CNN:0;iRNA_PseU:0 16859 chr10 85968025 85968025 1 + C A UCEC 85968024 + 85968004 85968044 41 CAACAACCACCCGCCAACATTCTATGGAGAGAGCGGACCCC CAACAACCACCCGCCAACATTATATGGAGAGAGCGGACCCC < 41bp 0.516362313534348 0.860338718058093 0.5484441 0.494427 prediction 0.687952809047491 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85968024 chr10:85968025 nonsynonymous SNV 0.781 4 22 hPsi_associated_SNPs_23135 0 0 0 0 1 cytosol 0.441441576930752 0.438718805939619 0 0 hPsi_site_16859 iPseU_CNN:0;iRNA_PseU:0 16860 chr19 49404125 49404125 1 + G A COAD 49404124 + 49404104 49404144 41 GCTGCTCCTGCTTCGCGCCGTGCTGGCTGTCCCCCTGGAGC GCTGCTCCTGCTTCGCGCCGTACTGGCTGTCCCCCTGGAGC < 41bp 0.548473693289847 0.892449429146178 0.2564836 0.6158114 prediction 0.687951471712662 Functional Gain - NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49404124 chr19:49404125 synonymous SNV . 0 22 hPsi_associated_SNPs_23136 0 0 1 0 2 Ribosome 0.436597606000049 0.437035938504971 0.2316228 0 hPsi_site_16860 iPseU_CNN:0.2316228;iRNA_PseU:0 16861 chr12 109523652 109523652 1 + G A PAAD 109523651 + 109523631 109523671 41 GGCCAGCCTGCAGGAGGTCCTGTCCTCCAGCGCCTACCTGC GGCCAGCCTGCAGGAGGTCCTATCCTCCAGCGCCTACCTGC < 41bp 0.545372116408752 0.889344643641842 0.3172806 0.7399344 prediction 0.687945054466179 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109523651 chr12:109523652 synonymous SNV . 0 22 hPsi_associated_SNPs_23137 0 0 1 0 0 Endoplasmic reticulum 0.438718592940361 0.438718592603345 0.4798688 0 hPsi_site_16861 iPseU_CNN:0.4798688;iRNA_PseU:0 16862 chr1 32085185 32085185 1 + C A STAD 32085184 + 32085164 32085204 41 GAGGACAGTCACCAACTACTTCATTGTCAACCTGTCCCTGG GAGGACAGTCACCAACTACTTAATTGTCAACCTGTCCCTGG < 41bp 0.507451679978005 0.851418395021975 0.29057056 0.7007972 prediction 0.687933430087941 Functional Gain - HCRTR1 ENSG00000121764 CDS Human protein_coding chr1:32085184 chr1:32085185 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23138 0 0 0 0 1 Endoplasmic reticulum 0.438718534270842 0.438718576801069 0.4015944 0 hPsi_site_16862 iPseU_CNN:0.4015944;iRNA_PseU:0 16863 chr16 20792388 20792388 1 + G A rs52817836 20792387 + 20792367 20792407 41 GGAGTAGTGTTTTTTCTCCGTGGATCCAGGGAGCATGTGTA GGAGTAGTGTTTTTTCTCCGTAGATCCAGGGAGCATGTGTA < 41bp 0.440311343499096 0.843958611834876 0.2050483 0.27193975 prediction 0.687917223669752 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20792387 chr16:20792388 stopgain 1.000 1 22 hPsi_associated_SNPs_23139 0 0 1 0 2 Endoplasmic reticulum 0.438718592886959 0.438718640805022 0 0 hPsi_site_16863 iPseU_CNN:0;iRNA_PseU:0 16864 chr20 1286607 1286607 1 + G A LUSC 1286606 + 1286586 1286626 41 GCTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCC GCTCCCTGCTGCGGGGCTGCTACACTGTGGCCTTGCACTCC < 41bp 0.45240982681604 0.843952096608992 0.25585505 0.7173396 prediction 0.687904193217985 Functional Gain - SNPH ENSG00000101298 CDS Human protein_coding chr20:1286606 chr20:1286607 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23140 0 0 0 0 0 Endoplasmic reticulum 0.438715576761852 0.438712507307716 0.4346792 0 hPsi_site_16864 iPseU_CNN:0.4346792;iRNA_PseU:0 16865 chr13 115090174 115090174 1 + C A UCEC 115090173 + 115090153 115090193 41 GGAAGCCATCCCCTTCAGAGTCTCCTGAACCTTGGAAGCCG GGAAGCCATCCCCTTCAGAGTATCCTGAACCTTGGAAGCCG < 41bp 0.497623059359587 0.843950708270912 0.2811847 0.6011854 prediction 0.687901416541823 Functional Gain - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090173 chr13:115090174 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_23141 0 0 1 0 0 nucleus 0.438718591121589 0.43871799852798 0.2023708 0 hPsi_site_16865 iPseU_CNN:0.2023708;iRNA_PseU:0 16866 chr4 15067812 15067812 1 + G A UCEC 15067811 + 15067791 15067831 41 ATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCG ATATGTGCTAGATGACCAGATATGTGATGAATGCCAGGGCG < 41bp 0.459663064562064 0.843944401557454 0.4933413 0.6559393 prediction 0.687888803114907 Functional Gain - CPEB2 ENSG00000137449 CDS Human protein_coding chr4:15067811 chr4:15067812 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23142 0 0 1 0 1 Endoplasmic reticulum 0.437949184431803 0.438680362291873 0.3118786 0 hPsi_site_16866 iPseU_CNN:0.3118786;iRNA_PseU:0 16867 chr2 105858363 105858363 1 + G A STAD 105858362 + 105858342 105858382 41 GGCTTACACATACCTGCTGCTGAACACCAGCAACGCCTCAG GGCTTACACATACCTGCTGCTAAACACCAGCAACGCCTCAG < 41bp 0.471498535055678 0.843941792705019 0.20382908 0.4475014 prediction 0.687883585410037 Functional Gain - GPR45 ENSG00000135973 CDS Human protein_coding chr2:105858362 chr2:105858363 synonymous SNV . 0 22 hPsi_associated_SNPs_23143 0 0 0 0 0 unknown 0.43871859060891 0.438709782187895 0 0 hPsi_site_16867 iPseU_CNN:0;iRNA_PseU:0 16868 chr10 43294038 43294038 1 + C A COAD 43294037 + 43294017 43294057 41 TCTTTGGACTGCTCCAGATTTCTTGTGGAGGCCCCCCATGA TCTTTGGACTGCTCCAGATTTATTGTGGAGGCCCCCCATGA < 41bp 0.487631440934008 0.843941188852172 0.445688 0.42302418 prediction 0.687882377704345 Functional Gain - BMS1 ENSG00000165733 CDS Human protein_coding chr10:43294037 chr10:43294038 nonsynonymous SNV 0.634 0 22 hPsi_associated_SNPs_23144 0 0 1 0 1 chromatin 0.438718576268891 0.438730881154217 0 0 hPsi_site_16868 iPseU_CNN:0;iRNA_PseU:0 16869 chr11 18354719 18354719 1 + G A LUAD 18354718 + 18354698 18354738 41 TCATGGCAGAAAGAATTGCTTGGGCACCTGAAGGCAAAGAT TCATGGCAGAAAGAATTGCTTAGGCACCTGAAGGCAAAGAT < 41bp 0.537700347976116 0.881638088949857 0.28634286 0.7598615 prediction 0.687875481947482 Functional Gain - GTF2H1 ENSG00000110768 CDS Human protein_coding chr11:18354718 chr11:18354719 stopgain 1.000 1 22 hPsi_associated_SNPs_23145 0 0 1 0 1 Cytosol 0.438723373521459 0.438997006198537 0.519723 0 hPsi_site_16869 iPseU_CNN:0.519723;iRNA_PseU:0 16870 chr19 55494719 55494719 1 + C A rs182010297 55494718 + 55494698 55494738 41 ACTCAGGAACCCCGACCTGATCCAAGCAGGCTACTACTCCT ACTCAGGAACCCCGACCTGATACAAGCAGGCTACTACTCCT < 41bp 0.490893390321034 0.843937549667827 0.2564599 0.5181237 prediction 0.687875099335653 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494718 chr19:55494719 synonymous SNV . 0 22 hPsi_associated_SNPs_23146 0 0 1 0 0 Cytosol 0.438718577367164 0.438719061659429 0.0362473999999999 0 hPsi_site_16870 iPseU_CNN:0.0362473999999999;iRNA_PseU:0 16871 chr7 143882720 143882720 1 + G A GBM 143882719 + 143882699 143882739 41 CAGCGGTCCATTGTTTCCAGTGGATACAAGGGGCCCGTTCA CAGCGGTCCATTGTTTCCAGTAGATACAAGGGGCCCGTTCA < 41bp 0.459726342754507 0.84393618025495 0.16923502 0.21887898 prediction 0.6878723605099 Functional Gain - CTAGE4 ENSG00000225932 CDS Human protein_coding chr7:143882719 chr7:143882720 synonymous SNV . 0 22 hPsi_associated_SNPs_23147 0 0 0 0 0 exosome 0.438718592995102 0.438718653853986 0 0 hPsi_site_16871 iPseU_CNN:0;iRNA_PseU:0 16872 chr16 25235781 25235781 1 + C A UCEC 25235780 + 25235760 25235800 41 AGGGGCGTTGGTGGCAGAGATCATCCTGACGACGCTGCTGG AGGGGCGTTGGTGGCAGAGATAATCCTGACGACGCTGCTGG < 41bp 0.50826159328666 0.852192328758387 0.25886256 0.4445561 prediction 0.687861470943456 Functional Gain - AQP8 ENSG00000103375 CDS Human protein_coding chr16:25235780 chr16:25235781 synonymous SNV . 0 22 hPsi_associated_SNPs_23148 0 0 0 0 1 Ribosome 0.438731685309478 0.438717639842869 0 0 hPsi_site_16872 iPseU_CNN:0;iRNA_PseU:0 16873 chr20 32349699 32349699 1 + G A UCEC 32349698 + 32349678 32349718 41 GAGAAGCCCTTCCAGTGCATTGCATGTGGCCGTGCCTTTGC GAGAAGCCCTTCCAGTGCATTACATGTGGCCGTGCCTTTGC < 41bp 0.55694844969314 0.90087640880097 0.20456967 0.4432542 prediction 0.68785591821566 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32349698 chr20:32349699 nonsynonymous SNV 0.976 1 22 hPsi_associated_SNPs_23149 0 0 0 0 1 chromatin 0.438717872367683 0.438164975938079 0 0 hPsi_site_16873 iPseU_CNN:0;iRNA_PseU:0 16874 chr1 28293279 28293279 1 + G A UCEC 28293278 + 28293258 28293298 41 GCTTCAGGGCACAGACTTCATGCCGGACCCCAGCTCCGAGT GCTTCAGGGCACAGACTTCATACCGGACCCCAGCTCCGAGT < 41bp 0.536075433182304 0.880002420663884 0.2473776 0.6061652 prediction 0.687853974963161 Functional Gain - XKR8 ENSG00000158156 CDS Human protein_coding chr1:28293278 chr1:28293279 nonsynonymous SNV 0.504 4 22 hPsi_associated_SNPs_23150 0 0 1 0 0 Endoplasmic reticulum 0.438352455980782 0.438628404068507 0.2123304 0 hPsi_site_16874 iPseU_CNN:0.2123304;iRNA_PseU:0 16875 chr11 59283057 59283057 1 + G A UCEC 59283056 + 59283036 59283076 41 TTACACGGTCATCTTGATGATGCTGAGGTCTCACACTGGGG TTACACGGTCATCTTGATGATACTGAGGTCTCACACTGGGG < 41bp 0.532491358218628 0.876416439478502 0.16316086 0.28849405 prediction 0.687850162519748 Functional Gain - OR4D9 ENSG00000172742 CDS Human protein_coding chr11:59283056 chr11:59283057 nonsynonymous SNV 0.451 0 22 hPsi_associated_SNPs_23151 0 0 0 0 0 unknown 0.438720767402402 0.438452985268399 0 0 hPsi_site_16875 iPseU_CNN:0;iRNA_PseU:0 16876 chr8 67039617 67039617 1 + G A OV 67039616 + 67039596 67039636 41 GATGTTCACGAAACCTGTGGTGATTCTCCCTTGTCAGCACA GATGTTCACGAAACCTGTGGTAATTCTCCCTTGTCAGCACA < 41bp 0.45694036746545 0.843922962654658 0.23966566 0.40574962 prediction 0.687845925309316 Functional Gain - TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67039616 chr8:67039617 synonymous SNV . 0 22 hPsi_associated_SNPs_23152 0 0 0 0 1 exosome 0.438688890154891 0.438721507796268 0 0 hPsi_site_16876 iPseU_CNN:0;iRNA_PseU:0 16877 chr17 77042726 77042726 1 + C A CESC 77042725 + 77042705 77042745 41 GCTGCTGTGACCCCGGTACCTCCATGTACCCGGCGACCGCC GCTGCTGTGACCCCGGTACCTACATGTACCCGGCGACCGCC < 41bp 0.476451384368512 0.8439191271435 0.2569366 0.7266009 prediction 0.687838254287 Functional Gain - C1QTNF1 ENSG00000173918 CDS Human protein_coding chr17:77042725 chr17:77042726 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_23153 0 0 0 0 2 exosome 0.435748160332182 0.438706910618835 0.4532018 0 hPsi_site_16877 iPseU_CNN:0.4532018;iRNA_PseU:0 16878 chr12 57167910 57167910 1 + G A SARC 57167909 + 57167889 57167929 41 ACCAAGATGGAGAGCATCGCTGCAGCTACTCAGTGGGTGAA ACCAAGATGGAGAGCATCGCTACAGCTACTCAGTGGGTGAA < 41bp 0.546437762734046 0.890356662974386 0.30586326 0.46086422 prediction 0.68783780048068 Functional Gain - HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57167909 chr12:57167910 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_23154 0 0 0 0 1 Endoplasmic reticulum 0.438718523858355 0.438719707060197 0 0 hPsi_site_16878 iPseU_CNN:0;iRNA_PseU:0 16879 chr5 5237128 5237128 1 + C A UCEC 5237127 + 5237107 5237147 41 TATCGCAGAAGGATTTGATTTCTTCTTTTCTTTGTCAAATA TATCGCAGAAGGATTTGATTTATTCTTTTCTTTGTCAAATA < 41bp 0.500609313022315 0.844526936448358 0.48103333 0.5932371 prediction 0.687835246852087 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5237127 chr5:5237128 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23155 0 0 0 0 2 exosome 0.438739350392201 0.438750173891857 0.1864742 0 hPsi_site_16879 iPseU_CNN:0.1864742;iRNA_PseU:0 16880 chr2 105708930 105708930 1 + G A rs115050163 105708929 + 105708909 105708949 41 TGCTGCTGAGGAAGAATTTGTGCAGAGGTTTCGAAGAAGTG TGCTGCTGAGGAAGAATTTGTACAGAGGTTTCGAAGAAGTG < 41bp 0.441762563873193 0.84391747593454 0.3168598 0.35020345 prediction 0.687834951869081 Functional Gain - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105708929 chr2:105708930 synonymous SNV . 0 22 hPsi_associated_SNPs_23156 0 0 1 0 2 Ribosome 0.438890221423261 0.438811397049469 0 0 hPsi_site_16880 iPseU_CNN:0;iRNA_PseU:0 16881 chr7 20444432 20444432 1 + C A UCEC 20444431 + 20444411 20444451 41 TCCCAGGAGCATCGGCCGCTTCTGTGAACACTGCCCCACCT TCCCAGGAGCATCGGCCGCTTATGTGAACACTGCCCCACCT < 41bp 0.513753236696967 0.857663978553671 0.59211445 0.6582529 prediction 0.687821483713407 Functional Gain - ITGB8 ENSG00000105855 CDS Human protein_coding chr7:20444431 chr7:20444432 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23157 0 0 0 0 1 Nucleus 0.418095062146543 0.430388171546115 0.1322769 0 hPsi_site_16881 iPseU_CNN:0.1322769;iRNA_PseU:0 16882 chr1 114442925 114442925 1 + G T PAAD 114442926 - 114442906 114442946 41 GAACTATTTGACATTCTCAATCTGTTGGATAGTTTCCTCAA GAACTATTTGACATTCTCAATATGTTGGATAGTTTCCTCAA < 41bp 0.501903651755351 0.84581394809963 0.4217524 0.34052026 prediction 0.687820592688558 Functional Gain - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442926 chr1:114442925 nonsynonymous SNV 0.935 4 22 hPsi_associated_SNPs_23158 0 0 1 0 0 chromatin 0.438707030822943 0.438718714655369 0 0 hPsi_site_16882 iPseU_CNN:0;iRNA_PseU:0 16883 chr22 38282822 38282822 1 + C A COAD 38282821 + 38282801 38282841 41 CGCCAGGCGTTATGGGGATTTCTTCATCCGTCAGATCCACA CGCCAGGCGTTATGGGGATTTATTCATCCGTCAGATCCACA < 41bp 0.485165138632306 0.84389200415232 0.2582974 0.6547803 prediction 0.68778400830464 Functional Gain - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38282821 chr22:38282822 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23159 0 0 1 0 2 Cytosol 0.438648015496199 0.438718652904925 0.3095606 0 hPsi_site_16883 iPseU_CNN:0.3095606;iRNA_PseU:0 16884 chr20 42341705 42341705 1 + G A rs7660 42341704 + 42341684 42341724 41 CTTGACATTGTGGATGAGGATGTGAAGCTGATGATGTCCAC CTTGACATTGTGGATGAGGATATGAAGCTGATGATGTCCAC < 41bp 0.447102421981701 0.843888311237668 0.28981942 0.32412356 prediction 0.687776622475335 Functional Gain - MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42341704 chr20:42341705 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_23160 0 0 1 0 2 Cytosol 0.438739746511327 0.439473087555859 0 0 hPsi_site_16884 iPseU_CNN:0;iRNA_PseU:0 16885 chr10 1042091 1042091 1 + C A BLCA 1042090 + 1042070 1042110 41 GATGAAGTATGGCGACTCTCTCTACCGCTGCAAACAGCTGA GATGAAGTATGGCGACTCTCTATACCGCTGCAAACAGCTGA < 41bp 0.504305752813911 0.848189751482339 0.3295929 0.4225831 prediction 0.687767997336856 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1042090 chr10:1042091 synonymous SNV . 0 22 hPsi_associated_SNPs_23161 0 0 1 0 1 Cytosol 0.438719534231371 0.438811374558105 0 0 hPsi_site_16885 iPseU_CNN:0;iRNA_PseU:0 16886 chr3 129207157 129207157 1 + G A UCEC 129207156 + 129207136 129207176 41 TTCAAGGAAGCCTACCAGATTGCTTGCTTGGGTGTCACAGA TTCAAGGAAGCCTACCAGATTACTTGCTTGGGTGTCACAGA < 41bp 0.538387537768069 0.882263594019408 0.25505024 0.28557193 prediction 0.687752112502677 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129207156 chr3:129207157 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_23162 0 0 0 2 1 Nucleus 0.43871859440984 0.438718596684217 0 0 hPsi_site_16886 iPseU_CNN:0;iRNA_PseU:0 16887 chr1 183521311 183521311 1 + G A rs552233491 183521310 + 183521290 183521330 41 GGGAGAGAGAGAGGAACTGCTGTTTATCTCACTCAGTTACT GGGAGAGAGAGAGGAACTGCTATTTATCTCACTCAGTTACT < 41bp 0.468152410071955 0.843874726040254 0.1869925 0.27083975 prediction 0.687749452080507 Functional Gain - SMG7 ENSG00000116698 UTR3 Human protein_coding chr1:183521310 chr1:183521311 . . 0 22 hPsi_associated_SNPs_23163 0 0 1 0 0 Cytosol 0.438718462095752 0.438722434286857 0 0 hPsi_site_16887 iPseU_CNN:0;iRNA_PseU:0 16888 chr22 31032055 31032055 1 + G A rs143495042 31032054 + 31032034 31032074 41 GAGTTCCCAGGGTCTGGATCTGCGCGCACCCTAATGACCTG GAGTTCCCAGGGTCTGGATCTACGCGCACCCTAATGACCTG < 41bp 0.513112234642408 0.856986022724724 0.3425605 0.85111284 prediction 0.687747576164633 Functional Gain - SLC35E4 ENSG00000100036 UTR5 Human protein_coding chr22:31032054 chr22:31032055 . . 0 22 hPsi_associated_SNPs_23164 0 0 0 0 0 exosome 0.438700724308668 0.438486398089868 0.70222568 0 hPsi_site_16888 iPseU_CNN:0.70222568;iRNA_PseU:0 16889 chr4 71201276 71201276 1 + G A UCEC 71201275 + 71201255 71201295 41 AAGGACAGCAGTGCTGGTGTTGCTGACGCTCCTGCCTTTCC AAGGACAGCAGTGCTGGTGTTACTGACGCTCCTGCCTTTCC < 41bp 0.535120224596642 0.878990159017028 0.30047366 0.74406123 prediction 0.687739868840771 Functional Gain - CABS1 ENSG00000145309 CDS Human protein_coding chr4:71201275 chr4:71201276 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23165 0 0 0 0 0 unknown 0.439242716086496 0.437360249620226 0.48812246 0 hPsi_site_16889 iPseU_CNN:0.48812246;iRNA_PseU:0 16890 chr14 69814645 69814645 1 + G A COAD 69814644 + 69814624 69814664 41 CAGCAGGGGAAGTGCCTGGCTGCCACCTCCACCTTAATGTC CAGCAGGGGAAGTGCCTGGCTACCACCTCCACCTTAATGTC < 41bp 0.444360086751999 0.843869437035973 0.31631497 0.5287411 prediction 0.687738874071945 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69814644 chr14:69814645 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_23166 0 0 0 0 2 chromatin 0.438744570533963 0.439285591082102 0.0574821999999999 0 hPsi_site_16890 iPseU_CNN:0.0574821999999999;iRNA_PseU:0 16891 chr15 64422171 64422171 1 + C A UCEC 64422170 + 64422150 64422190 41 TGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCG TGCTGGTCTCCTCAAGATGTTAAACAAAGCCACAGATGCCG < 41bp 0.514120127683878 0.857989166878598 0.3218573 0.70331156 prediction 0.687738078389442 Functional Gain - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64422170 chr15:64422171 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23167 0 0 1 0 3 Ribosome 0.438742514006876 0.438720988049935 0.40662312 0 hPsi_site_16891 iPseU_CNN:0.40662312;iRNA_PseU:0 16892 chr11 118948900 118948900 1 + C A HNSC 118948899 + 118948879 118948919 41 CTAGGCCAACTCTGAGGAGTTCATCCCCATCTTTGCCAATA CTAGGCCAACTCTGAGGAGTTAATCCCCATCTTTGCCAATA < 41bp 0.500023608706863 0.843889982996217 0.29655105 0.6276747 prediction 0.687732748578709 Functional Gain - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118948899 chr11:118948900 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23168 0 0 1 0 1 cytosol 0.438721165252392 0.438767018058807 0.2553494 0 hPsi_site_16892 iPseU_CNN:0.2553494;iRNA_PseU:0 16893 chr11 6226882 6226882 1 + G A SKCM 6226881 + 6226861 6226901 41 CCCAACCTGCTGACACTGGATGAAGCTGATGCCACCTGGAC CCCAACCTGCTGACACTGGATAAAGCTGATGCCACCTGGAC < 41bp 0.515337779501354 0.85919289016547 0.23035854 0.46668965 prediction 0.687710221328231 Functional Gain - C11orf42 ENSG00000180878 CDS Human protein_coding chr11:6226881 chr11:6226882 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23169 0 0 0 0 1 exosome 0.436343971658568 0.438721423463106 0 0 hPsi_site_16893 iPseU_CNN:0;iRNA_PseU:0 16894 chr15 65864634 65864634 1 + G A UCEC 65864633 + 65864613 65864653 41 CGGACGATTCAGTTTCACATTGCCATATCCAGTGAAAATCA CGGACGATTCAGTTTCACATTACCATATCCAGTGAAAATCA < 41bp 0.53829876331461 0.882150745897504 0.31177354 0.41238445 prediction 0.687703965165787 Functional Gain - HACD3 ENSG00000074696 CDS Human protein_coding chr15:65864633 chr15:65864634 synonymous SNV . 0 22 hPsi_associated_SNPs_23170 0 0 1 2 2 Ribosome 0.439277512052532 0.438287106321462 0 0 hPsi_site_16894 iPseU_CNN:0;iRNA_PseU:0 16895 chr8 23112868 23112868 1 + G A CESC 23112867 + 23112847 23112887 41 TGTGCTAACTCCTGCCCAGATGAGAGGACCTTCTACTTGGT TGTGCTAACTCCTGCCCAGATAAGAGGACCTTCTACTTGGT < 41bp 0.486743483494821 0.843849077224133 0.23209071 0.26895967 prediction 0.687698154448265 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23112867 chr8:23112868 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23171 0 0 1 0 1 Ribosome 0.438718499017499 0.438718647880939 0 0 hPsi_site_16895 iPseU_CNN:0;iRNA_PseU:0 16896 chr1 247751686 247751686 1 + G A BLCA 247751685 + 247751665 247751705 41 GGGATGGTGAGACATACCAATGAGAGCAACCTAGCAGGTTT GGGATGGTGAGACATACCAATAAGAGCAACCTAGCAGGTTT < 41bp 0.504565276068349 0.848412010304578 0.2932104 0.31783333 prediction 0.687693468472457 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247751685 chr1:247751686 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23172 0 0 0 0 0 unknown 0.438718593511782 0.438718592986031 0 0 hPsi_site_16896 iPseU_CNN:0;iRNA_PseU:0 16897 chr3 97983995 97983995 1 + G A SKCM 97983994 + 97983974 97984014 41 AGCAGATGACCAAGATATGATGGAGTCTCTATTTTACACTG AGCAGATGACCAAGATATGATAGAGTCTCTATTTTACACTG < 41bp 0.495434697094453 0.843841836433786 0.21903726 0.28083172 prediction 0.687683672867572 Functional Gain - OR5H6 ENSG00000230301 CDS Human protein_coding chr3:97983994 chr3:97983995 nonsynonymous SNV 0.164 0 22 hPsi_associated_SNPs_23173 0 0 0 0 0 unknown 0.438719968751105 0.438633173134235 0 0 hPsi_site_16897 iPseU_CNN:0;iRNA_PseU:0 16898 chr3 155655436 155655436 1 + G A COAD 155655435 + 155655415 155655455 41 TCCTGGTATTTCTCGAATTATGTATGACTTAACATCAAAGC TCCTGGTATTTCTCGAATTATATATGACTTAACATCAAAGC < 41bp 0.528285747977646 0.872126188792727 0.4004979 0.5412408 prediction 0.687680881630163 Functional Gain - GMPS ENSG00000163655 CDS Human protein_coding chr3:155655435 chr3:155655436 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23174 0 0 0 0 1 Nucleus 0.441070239537071 0.438832663528244 0.0824815999999999 0 hPsi_site_16898 iPseU_CNN:0.0824815999999999;iRNA_PseU:0 16899 chr11 130060569 130060569 1 + G A rs7126904 130060568 + 130060548 130060588 41 GTACAACACCCTGAGCCCCATGGAGCCCCACGCCCTGGTGC GTACAACACCCTGAGCCCCATAGAGCCCCACGCCCTGGTGC < 41bp 0.448065561873388 0.843834745595068 0.34830713 0.49122688 prediction 0.687669491190135 Functional Gain - ST14 ENSG00000149418 CDS Human protein_coding chr11:130060568 chr11:130060569 nonsynonymous SNV 0.919 0 22 hPsi_associated_SNPs_23175 0 0 0 0 1 Ribosome 0.438718618561589 0.438695931882557 0 0 hPsi_site_16899 iPseU_CNN:0;iRNA_PseU:0 16900 chr8 134237790 134237790 1 + G A LAML 134237789 + 134237769 134237809 41 AGAGAGCCGCCTCTGCAACTTGCGGCCATGCGATGTGGACA AGAGAGCCGCCTCTGCAACTTACGGCCATGCGATGTGGACA < 41bp 0.549429715407604 0.893258888939569 0.23576865 0.44196334 prediction 0.687658347063929 Functional Gain - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134237789 chr8:134237790 synonymous SNV . 0 22 hPsi_associated_SNPs_23176 0 0 0 0 1 nucleus 0.438682825530499 0.438729679704876 0 0 hPsi_site_16900 iPseU_CNN:0;iRNA_PseU:0 16901 chr18 57569917 57569917 1 + G A HNSC 57569916 + 57569896 57569936 41 GCTACTCAACTCAGGAGATTTGGAGACAAACTGAACTTCCG GCTACTCAACTCAGGAGATTTAGAGACAAACTGAACTTCCG < 41bp 0.481450854591991 0.843828298695999 0.34391648 0.46015674 prediction 0.687656597391997 Functional Gain - PMAIP1 ENSG00000141682 CDS Human protein_coding chr18:57569916 chr18:57569917 stopgain 0.728 3 22 hPsi_associated_SNPs_23177 0 0 1 0 1 Cytosol 0.438799443458624 0.437973088805953 0 0 hPsi_site_16901 iPseU_CNN:0;iRNA_PseU:0 16902 chr8 53853430 53853430 1 + G A OV 53853429 + 53853409 53853449 41 CCGCAGGAACCTCCGCCAGCTGATAACTTGCCGCGCGGCAG CCGCAGGAACCTCCGCCAGCTAATAACTTGCCGCGCGGCAG < 41bp 0.514188313243004 0.858009181795048 0.14227203 0.26509082 prediction 0.687641737104087 Functional Gain - NPBWR1 ENSG00000183729 CDS Human protein_coding chr8:53853429 chr8:53853430 synonymous SNV . 0 22 hPsi_associated_SNPs_23178 0 0 0 0 0 exosome 0.438726988935526 0.438717942987439 0 0 hPsi_site_16902 iPseU_CNN:0;iRNA_PseU:0 16903 chr14 94394796 94394796 1 + C A BLCA 94394795 + 94394775 94394815 41 CTCCCAGAAGTATTCCCGGCTCCCGCGGGGCCTTCCTGGCA CTCCCAGAAGTATTCCCGGCTACCGCGGGGCCTTCCTGGCA < 41bp 0.496706308672296 0.84382047228277 0.25517207 0.4504814 prediction 0.68764094456554 Functional Gain - FAM181A ENSG00000140067 CDS Human protein_coding chr14:94394795 chr14:94394796 synonymous SNV . 0 22 hPsi_associated_SNPs_23179 0 0 0 0 0 exosome 0.438718683243549 0.438718595281828 0 0 hPsi_site_16903 iPseU_CNN:0;iRNA_PseU:0 16904 chr3 14862611 14862611 1 + C A LUAD 14862610 + 14862590 14862630 41 TGGATGTGAACGTGTCTTCCTCTAGGTCCTCTTCAGAGTCC TGGATGTGAACGTGTCTTCCTATAGGTCCTCTTCAGAGTCC < 41bp 0.494757045253981 0.843818310879796 0.29344916 0.5846483 prediction 0.687636621759592 Functional Gain - FGD5 ENSG00000154783 CDS Human protein_coding chr3:14862610 chr3:14862611 nonsynonymous SNV 0.534 4 22 hPsi_associated_SNPs_23180 0 0 0 0 0 Cytosol 0.438722450965227 0.438835739311667 0.1692966 0 hPsi_site_16904 iPseU_CNN:0.1692966;iRNA_PseU:0 16905 chr19 58189342 58189342 1 + G A GBM 58189341 + 58189321 58189361 41 GAGGATATGCCCTTAAGAGATGTCATTGTTCATCTCACAAA GAGGATATGCCCTTAAGAGATATCATTGTTCATCTCACAAA < 41bp 0.459274226958679 0.84381767146781 0.27454287 0.60047096 prediction 0.687635342935619 Functional Gain - ZSCAN4 ENSG00000180532 CDS Human protein_coding chr19:58189341 chr19:58189342 nonsynonymous SNV 0.942 0 22 hPsi_associated_SNPs_23181 0 0 0 0 1 exosome 0.436295410043314 0.43356666728113 0.20094192 0 hPsi_site_16905 iPseU_CNN:0.20094192;iRNA_PseU:0 16906 chr3 47447473 47447473 1 + C A rs138320436 47447472 + 47447452 47447492 41 CGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGCGTCG CGCCTACCTACGGGAGCACTTACCTCAAGCCTACAGCGTCG < 41bp 0.508558369439828 0.852372178578888 0.37287098 0.8070703 prediction 0.687627618278119 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47447472 chr3:47447473 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23182 0 0 1 0 3 chromatin 0.438718592993902 0.438718592973627 0.6141406 0 hPsi_site_16906 iPseU_CNN:0.6141406;iRNA_PseU:0 16907 chrX 56291793 56291793 1 + G A UCEC 56291792 + 56291772 56291812 41 CTGCCCCAAGTGGAACCAGTTGACCTCTCCTTTCACAAGCC CTGCCCCAAGTGGAACCAGTTAACCTCTCCTTTCACAAGCC < 41bp 0.436542545620177 0.843812312220702 0.4392526 0.7918416 prediction 0.687624624441404 Functional Gain - KLF8 ENSG00000102349 CDS Human protein_coding chrX:56291792 chrX:56291793 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23183 0 0 0 0 0 Endoplasmic reticulum 0.439266814140274 0.439172516533248 0.5836832 0 hPsi_site_16907 iPseU_CNN:0.5836832;iRNA_PseU:0 16908 chr11 36614616 36614616 1 + G A STAD 36614615 + 36614595 36614635 41 GAATCCCCTGGATCTTCTGTTGATGTTTGACTGTTTGTGAA GAATCCCCTGGATCTTCTGTTAATGTTTGACTGTTTGTGAA < 41bp 0.464752476920831 0.843811796468347 0.25886983 0.29087138 prediction 0.687623592936693 Functional Gain - RAG2 ENSG00000175097 CDS Human protein_coding chr11:36614615 chr11:36614616 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23184 0 0 0 7 1 exosome 0.437278013912586 0.438718392187847 0 0 hPsi_site_16908 iPseU_CNN:0;iRNA_PseU:0 16909 chr11 126120475 126120475 1 + G A BLCA 126120474 + 126120454 126120494 41 TGATGACTTGGAGTCAAAGATGGAAGATTCTGGAAAACAGC TGATGACTTGGAGTCAAAGATAGAAGATTCTGGAAAACAGC < 41bp 0.459909482012555 0.84381171847991 0.19924238 0.24933249 prediction 0.68762343695982 Functional Gain - FAM118B ENSG00000197798 CDS Human protein_coding chr11:126120474 chr11:126120475 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23185 0 0 1 0 0 Ribosome 0.438716201414407 0.43871880619716 0 0 hPsi_site_16909 iPseU_CNN:0;iRNA_PseU:0 16910 chr3 184025433 184025433 1 + G A STAD 184025432 + 184025412 184025452 41 TGCCCGTCTGGCTGCAATGCTGCGCCAGTTAGCTCAATATC TGCCCGTCTGGCTGCAATGCTACGCCAGTTAGCTCAATATC < 41bp 0.436749797758213 0.843809098510148 0.27318245 0.43423948 prediction 0.687618197020297 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184025432 chr3:184025433 synonymous SNV . 0 22 hPsi_associated_SNPs_23186 0 0 1 0 2 Ribosome 0.433833723534563 0.423851576055631 0 0 hPsi_site_16910 iPseU_CNN:0;iRNA_PseU:0 16911 chr6 44219803 44219803 1 + G A rs324134 44219802 + 44219782 44219822 41 GCGGAAACGGGGCTTCGAGGTGGTATATATGACCGAGCCCA GCGGAAACGGGGCTTCGAGGTAGTATATATGACCGAGCCCA < 41bp 0.549999632000554 0.893806012611256 0.22330841 0.5207926 prediction 0.687612761221404 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219802 chr6:44219803 synonymous SNV . 0 22 hPsi_associated_SNPs_23187 0 0 1 0 1 Nucleus 0.43871859314681 0.438718892281001 0.0415852000000001 0 hPsi_site_16911 iPseU_CNN:0.0415852000000001;iRNA_PseU:0 16912 chr8 42977481 42977481 1 + G A LUSC 42977480 + 42977460 42977500 41 AACCTTTCAAAGTACCAAAATGTGAACACGTGGCAGCACAG AACCTTTCAAAGTACCAAAATATGAACACGTGGCAGCACAG < 41bp 0.456698327837879 0.843801239691599 0.28415984 0.40881 prediction 0.687602479383198 Functional Gain - POMK ENSG00000185900 CDS Human protein_coding chr8:42977480 chr8:42977481 nonsynonymous SNV 0.225 1 22 hPsi_associated_SNPs_23188 0 0 1 0 0 Ribosome 0.438716930774398 0.438710823619098 0 0 hPsi_site_16912 iPseU_CNN:0;iRNA_PseU:0 16913 chr3 119305362 119305362 1 + C A LUAD 119305361 + 119305341 119305381 41 CTGGGGGCCCTTGCGTCTGCTCTTTTTACAGCCTATGCTGT CTGGGGGCCCTTGCGTCTGCTATTTTTACAGCCTATGCTGT < 41bp 0.520311693790982 0.864112787704299 0.22681177 0.298465 prediction 0.687602187826633 Functional Gain - ADPRH ENSG00000144843 CDS Human protein_coding chr3:119305361 chr3:119305362 nonsynonymous SNV 0.776 4 22 hPsi_associated_SNPs_23189 0 0 0 0 0 exosome 0.438718593059137 0.438718593056203 0 0 hPsi_site_16913 iPseU_CNN:0;iRNA_PseU:0 16914 chr14 24707474 24707474 1 + G A HNSC 24707473 + 24707453 24707493 41 GGCAGGAGCTGACTTCGTGATGCTGGGTGGCATGCTGGCTG GGCAGGAGCTGACTTCGTGATACTGGGTGGCATGCTGGCTG < 41bp 0.54212248097778 0.885921292887155 0.24288154 0.6958741 prediction 0.687597623818752 Functional Gain - GMPR2 ENSG00000100938 CDS Human protein_coding chr14:24707473 chr14:24707474 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_23190 0 0 1 0 1 Ribosome 0.438706983779823 0.438686498750765 0.3917482 0 hPsi_site_16914 iPseU_CNN:0.3917482;iRNA_PseU:0 16915 chr9 116187679 116187679 1 + G A UCEC 116187678 + 116187658 116187698 41 GCAGCAGCAACAGAAGAAGGTGAAAACACCTATTAAGAAAC GCAGCAGCAACAGAAGAAGGTAAAAACACCTATTAAGAAAC < 41bp 0.440176148858095 0.843769950106921 0.3045025 0.63238853 prediction 0.687539900213841 Functional Gain - C9orf43 ENSG00000157653 CDS Human protein_coding chr9:116187678 chr9:116187679 synonymous SNV . 0 22 hPsi_associated_SNPs_23191 0 0 0 0 2 exosome 0.438730245158574 0.438718263679716 0.26477706 0 hPsi_site_16915 iPseU_CNN:0.26477706;iRNA_PseU:0 16916 chr1 87805265 87805265 1 + C A LAML 87805264 + 87805244 87805284 41 AGCGCTTGCGGACAGTCGATTCCTGCGAGTGAACTCGTCAT AGCGCTTGCGGACAGTCGATTACTGCGAGTGAACTCGTCAT < 41bp 0.506441572829564 0.850205233972163 0.33623797 0.75625014 prediction 0.687527322285198 Functional Gain - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805264 chr1:87805265 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23192 0 0 1 0 2 Ribosome 0.438696739334717 0.426359412571017 0.51250028 0 hPsi_site_16916 iPseU_CNN:0.51250028;iRNA_PseU:0 16917 chr1 229794849 229794849 1 + G A LUSC 229794848 + 229794828 229794868 41 GGTTTGCCTTTTTCCTCAGGTGACCTTATATCCAGCTGTGA GGTTTGCCTTTTTCCTCAGGTAACCTTATATCCAGCTGTGA < 41bp 0.460991346816458 0.843757437231643 0.22050112 0.3508087 prediction 0.687514874463286 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229794848 chr1:229794849 synonymous SNV . 0 22 hPsi_associated_SNPs_23193 0 0 1 0 1 Nucleus 0.438718607676395 0.438718592995436 0 0 hPsi_site_16917 iPseU_CNN:0;iRNA_PseU:0 16918 chr1 107600312 107600312 1 + G A BLCA 107600311 + 107600291 107600331 41 GAAACAGGCGCTCCTCTACCTGAACGAGCCGGTGCAAGTGG GAAACAGGCGCTCCTCTACCTAAACGAGCCGGTGCAAGTGG < 41bp 0.46627965819372 0.843748547889654 0.27250636 0.29807597 prediction 0.687497095779309 Functional Gain - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600311 chr1:107600312 synonymous SNV . 0 22 hPsi_associated_SNPs_23194 0 0 1 0 0 Ribosome 0.438694228118865 0.438097942930166 0 0 hPsi_site_16918 iPseU_CNN:0;iRNA_PseU:0 16919 chr19 49055564 49055564 1 + G A SKCM 49055563 + 49055543 49055583 41 TTGTGGGACACCTATGAAGATGACATCTCGGAAATCAGGTG TTGTGGGACACCTATGAAGATAACATCTCGGAAATCAGGTG < 41bp 0.469685315321521 0.843744182274348 0.34162727 0.41875878 prediction 0.687488364548696 Functional Gain - SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49055563 chr19:49055564 nonsynonymous SNV 0.029 0 22 hPsi_associated_SNPs_23195 0 0 0 0 1 exosome 0.438713988546032 0.4387185927247 0 0 hPsi_site_16919 iPseU_CNN:0;iRNA_PseU:0 16920 chr17 34964441 34964441 1 + C A UCEC 34964440 + 34964420 34964460 41 TGGACTTGAGTCCTTGAACGTCTCTGTGGCTGCAGGTGAGT TGGACTTGAGTCCTTGAACGTATCTGTGGCTGCAGGTGAGT < 41bp 0.50132543213458 0.845068392285754 0.28510857 0.64869726 prediction 0.68748592030235 Functional Gain - MRM1 ENSG00000129282 CDS Human other chr17:34964440 chr17:34964441 synonymous SNV . 0 22 hPsi_associated_SNPs_23196 0 0 1 0 1 nucleolus 0.438723115861104 0.438718553176301 0.29739452 0 hPsi_site_16920 iPseU_CNN:0.29739452;iRNA_PseU:0 16921 chr14 105920599 105920599 1 + C A UCEC 105920598 + 105920578 105920618 41 CTGGCAGATAAAGGAGAGATTCGAGTAGGAAACCGGTACCA CTGGCAGATAAAGGAGAGATTAGAGTAGGAAACCGGTACCA < 41bp 0.49110325978034 0.843739630739104 0.2818227 0.6713065 prediction 0.687479261478208 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105920598 chr14:105920599 synonymous SNV . 0 22 hPsi_associated_SNPs_23197 0 0 1 1 2 Cytosol 0.43871857870373 0.438718635891927 0.342613 0 hPsi_site_16921 iPseU_CNN:0.342613;iRNA_PseU:0 16922 chr14 57863507 57863507 1 + G A STAD 57863506 + 57863486 57863526 41 AGTGTGTAGGTGCCATCGTTTGCAAGTTGGATATGCACAAA AGTGTGTAGGTGCCATCGTTTACAAGTTGGATATGCACAAA < 41bp 0.544007654557183 0.887746562871193 0.33735436 0.48412377 prediction 0.68747781662802 Functional Gain - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57863506 chr14:57863507 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23198 0 0 1 1 2 Ribosome 0.438739234930131 0.438718617877961 0 0 hPsi_site_16922 iPseU_CNN:0;iRNA_PseU:0 16923 chr3 48506419 48506419 1 + G A HNSC 48506418 + 48506398 48506438 41 GTGGAGGTCCTGCATCAGTTTGACCAGGTGATGCCGGGGGT GTGGAGGTCCTGCATCAGTTTAACCAGGTGATGCCGGGGGT < 41bp 0.49939259728474 0.843737842229567 0.252173 0.54857606 prediction 0.687475684459134 Functional Gain - ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506418 chr3:48506419 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23199 0 0 1 0 1 chromatin 0.438718592807138 0.438740790711553 0.0971521200000001 0 hPsi_site_16923 iPseU_CNN:0.0971521200000001;iRNA_PseU:0 16924 chr3 12458304 12458304 1 + C A LUAD 12458303 + 12458283 12458323 41 GCAGAGCAAAGAGGTGGCCATCCGCATCTTTCAGGGCTGCC GCAGAGCAAAGAGGTGGCCATACGCATCTTTCAGGGCTGCC < 41bp 0.49344394851736 0.843736226104533 0.27365682 0.84770954 prediction 0.687472452209065 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12458303 chr3:12458304 synonymous SNV . 0 22 hPsi_associated_SNPs_23200 0 0 1 0 0 Cytosol 0.438719749047341 0.439657331871188 0.69541908 0 hPsi_site_16924 iPseU_CNN:0.69541908;iRNA_PseU:0 16925 chr11 9746380 9746380 1 + C A OV 9746379 + 9746359 9746399 41 GCATGGACCGGCAGACTGTGTCTATGGCAATTAATGAAGTC GCATGGACCGGCAGACTGTGTATATGGCAATTAATGAAGTC < 41bp 0.503274136957861 0.846998760912677 0.19045848 0.27947247 prediction 0.687449247909632 Functional Gain - SWAP70 ENSG00000133789 CDS Human protein_coding chr11:9746379 chr11:9746380 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23201 0 0 1 0 1 cytosol 0.437180415866691 0.438061763079552 0 0 hPsi_site_16925 iPseU_CNN:0;iRNA_PseU:0 16926 chr1 248616785 248616785 1 + G A HNSC 248616784 + 248616764 248616804 41 CCTCCTGACTGTCCACAGGATGAACTCTGCTGAGGGCCGGC CCTCCTGACTGTCCACAGGATAAACTCTGCTGAGGGCCGGC < 41bp 0.479588788212176 0.843723597061432 0.2629255 0.56584454 prediction 0.687447194122864 Functional Gain - OR2T2 ENSG00000196240 CDS Human protein_coding chr1:248616784 chr1:248616785 nonsynonymous SNV 0.015 2 22 hPsi_associated_SNPs_23202 0 0 0 0 0 exosome 0.438710626717633 0.438718557895238 0.13168908 0 hPsi_site_16926 iPseU_CNN:0.13168908;iRNA_PseU:0 16927 chr20 25656842 25656842 1 + G T LUAD 25656843 - 25656823 25656863 41 GCCGAGGCTTTAGCAATAAGTCACACCTTATCACACACCAG GCCGAGGCTTTAGCAATAAGTAACACCTTATCACACACCAG < 41bp 0.506620369610455 0.850341536883416 0.13077429 0.33092844 prediction 0.687442334545922 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656843 chr20:25656842 stopgain 0.023 0 22 hPsi_associated_SNPs_23203 0 0 1 0 0 Cytosol 0.438713833625121 0.438717890884483 0 0 hPsi_site_16927 iPseU_CNN:0;iRNA_PseU:0 16928 chr10 35896773 35896773 1 + G A LGG 35896772 + 35896752 35896792 41 CCGCGCTGGGCCCCCGCCGCTGCCCCGACCCCCGGGAGCCG CCGCGCTGGGCCCCCGCCGCTACCCCGACCCCCGGGAGCCG < 41bp 0.531226937750029 0.87494647949508 0.28711903 0.5696104 prediction 0.687439083490102 Functional Gain - GJD4 ENSG00000177291 CDS Human protein_coding chr10:35896772 chr10:35896773 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_23204 0 0 0 0 0 exosome 0.438718681950937 0.438725172176551 0.1392208 0 hPsi_site_16928 iPseU_CNN:0.1392208;iRNA_PseU:0 16929 chr16 31120604 31120604 1 + C A HNSC 31120603 + 31120583 31120623 41 CGGGCTTCCGCTCCGGCCCCTCCTGGGACCCGCACTCGCGC CGGGCTTCCGCTCCGGCCCCTACTGGGACCCGCACTCGCGC < 41bp 0.501686050371937 0.845404655429757 0.23192516 0.61460984 prediction 0.687437210115638 Functional Gain - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31120603 chr16:31120604 synonymous SNV . 0 22 hPsi_associated_SNPs_23205 0 0 1 0 0 Ribosome 0.438719750352921 0.443553468771322 0.22921968 0 hPsi_site_16929 iPseU_CNN:0.22921968;iRNA_PseU:0 16930 chr11 6261666 6261666 1 + G A CESC 6261665 + 6261645 6261685 41 GCAGCCTGGCTTTGAGCGCCTGCGGCGCCAGTACCTCTATA GCAGCCTGGCTTTGAGCGCCTACGGCGCCAGTACCTCTATA < 41bp 0.422415319915999 0.843718151399056 0.29462945 0.69099766 prediction 0.687436302798113 Functional Gain - CNGA4 ENSG00000132259 CDS Human protein_coding chr11:6261665 chr11:6261666 synonymous SNV . 0 22 hPsi_associated_SNPs_23206 0 0 0 0 0 exosome 0.438718592854649 0.438718593248759 0.38199532 0 hPsi_site_16930 iPseU_CNN:0.38199532;iRNA_PseU:0 16931 chr15 90616413 90616413 1 + C A rs147782032 90616412 + 90616392 90616432 41 CCGGCCCTACCAGTGCCACATCTGCTTCAAGACCTTTGTAC CCGGCCCTACCAGTGCCACATATGCTTCAAGACCTTTGTAC < 41bp 0.489832006625153 0.843714900878334 0.23340648 0.2682699 prediction 0.687429801756668 Functional Gain - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90616412 chr15:90616413 synonymous SNV . 0 22 hPsi_associated_SNPs_23207 0 0 0 0 1 Endoplasmic reticulum 0.438720665113905 0.438714783963825 0 0 hPsi_site_16931 iPseU_CNN:0;iRNA_PseU:0 16932 chr2 242814496 242814496 1 + G A GBM 242814495 + 242814475 242814515 41 TGGGGGCAAAGGCTTCCCGGTGGCCATTGGAGACCCCCTCT TGGGGGCAAAGGCTTCCCGGTAGCCATTGGAGACCCCCTCT < 41bp 0.45233481761642 0.843710503071959 0.22495449 0.6597639 prediction 0.687421006143918 Functional Gain - RTP5 ENSG00000188011 CDS Human protein_coding chr2:242814495 chr2:242814496 synonymous SNV . 0 22 hPsi_associated_SNPs_23208 0 0 0 0 0 exosome 0.438718594790405 0.438718592894488 0.3195278 0 hPsi_site_16932 iPseU_CNN:0.3195278;iRNA_PseU:0 16933 chr11 103908354 103908354 1 + G A SKCM 103908353 + 103908333 103908373 41 GGGCGCCCAGATGACCATTATGAGCCAGGCTTGTGCCGAGC GGGCGCCCAGATGACCATTATAAGCCAGGCTTGTGCCGAGC < 41bp 0.450211997591258 0.84370750266509 0.34010464 0.7358349 prediction 0.68741500533018 Functional Gain - DDI1 ENSG00000170967 CDS Human protein_coding chr11:103908353 chr11:103908354 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23209 1 0 0 0 0 exosome 0.438718593419178 0.438718546241721 0.4716698 0 hPsi_site_16933 iPseU_CNN:0.4716698;iRNA_PseU:0 16934 chr9 104309176 104309176 1 + G A STAD 104309175 + 104309155 104309195 41 GGAGTCCATGATTGATGACCTGCAGTGGGATATTGACAAAA GGAGTCCATGATTGATGACCTACAGTGGGATATTGACAAAA < 41bp 0.442534835802574 0.843705223779228 0.28251845 0.3408059 prediction 0.687410447558455 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104309175 chr9:104309176 synonymous SNV . 0 22 hPsi_associated_SNPs_23210 0 0 1 0 2 nucleus 0.438625910066548 0.438590922864528 0 0 hPsi_site_16934 iPseU_CNN:0;iRNA_PseU:0 16935 chr15 57732647 57732647 1 + C A READ 57732646 + 57732626 57732666 41 GAGGAGACAGCTAAGCAGATTCTCTACAATTACCTCAAAGA GAGGAGACAGCTAAGCAGATTATCTACAATTACCTCAAAGA < 41bp 0.504163542431885 0.847859935849019 0.34890062 0.38594466 prediction 0.687392786834269 Functional Gain - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57732646 chr15:57732647 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_23211 0 0 1 0 1 cytosol 0.438708725147742 0.43890268488149 0 0 hPsi_site_16935 iPseU_CNN:0;iRNA_PseU:0 16936 chr9 131482723 131482723 1 + G A COAD 131482722 + 131482702 131482742 41 CACCATCCAGCCCCCCTTCGTGCCTACCCTGTGTGGCCCTG CACCATCCAGCCCCCCTTCGTACCTACCCTGTGTGGCCCTG < 41bp 0.45037136122489 0.843693687068494 0.17957118 0.3662911 prediction 0.687387374136988 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131482722 chr9:131482723 synonymous SNV . 0 22 hPsi_associated_SNPs_23212 0 0 1 0 1 chromatin 0.438718157444103 0.438718224679792 0 0 hPsi_site_16936 iPseU_CNN:0;iRNA_PseU:0 16937 chr1 184023536 184023536 1 + G A UCEC 184023535 + 184023515 184023555 41 GGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCT GGAGATGCCACCCAAGTTTATATAGCGTTCTTGGTTTACCT < 41bp 0.536727462487486 0.880418613310064 0.31714922 0.3958575 prediction 0.687382301645156 Functional Gain - TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184023535 chr1:184023536 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23213 0 0 1 2 2 Ribosome 0.438868390810827 0.438719063308402 0 0 hPsi_site_16937 iPseU_CNN:0;iRNA_PseU:0 16938 chr9 36083418 36083418 1 + C A OV 36083417 + 36083397 36083437 41 ACAAACTGCCGAGAATACTGTCAAGCCATTTTTCGAACAGA ACAAACTGCCGAGAATACTGTAAAGCCATTTTTCGAACAGA < 41bp 0.49987126374707 0.843682950760214 0.43357876 0.74124473 prediction 0.687365901520429 Functional Gain - RECK ENSG00000122707 CDS Human protein_coding chr9:36083417 chr9:36083418 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23214 0 0 0 3 1 exosome 0.438703092374412 0.438719708372286 0.48248946 0 hPsi_site_16938 iPseU_CNN:0.48248946;iRNA_PseU:0 16939 chr13 100518550 100518550 1 + G A COAD 100518549 + 100518529 100518569 41 TACGCCCGGCAAAAGATTGTTGTCATAGCGAAAGCCTTTGG TACGCCCGGCAAAAGATTGTTATCATAGCGAAAGCCTTTGG < 41bp 0.4446982738836 0.843679675494441 0.55583346 0.72154474 prediction 0.687359350988882 Functional Gain - CLYBL ENSG00000125246 CDS Human protein_coding chr13:100518549 chr13:100518550 nonsynonymous SNV 0.943 1 22 hPsi_associated_SNPs_23215 0 0 1 0 1 Ribosome 0.438729215222247 0.438718190354443 0.33142256 0 hPsi_site_16939 iPseU_CNN:0.33142256;iRNA_PseU:0 16940 chr16 1825151 1825151 1 + G A LUAD 1825150 + 1825130 1825170 41 TGTGGTACCGCTCACTCTCATGCCCACAGCAGGGCTGGCTG TGTGGTACCGCTCACTCTCATACCCACAGCAGGGCTGGCTG < 41bp 0.461599958324303 0.843677758969332 0.17451286 0.24420369 prediction 0.687355517938665 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825150 chr16:1825151 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23216 0 0 0 0 1 chromatin 0.445400486490379 0.442484422980366 0 0 hPsi_site_16940 iPseU_CNN:0;iRNA_PseU:0 16941 chr1 46740290 46740290 1 + G A LGG 46740289 + 46740269 46740309 41 TGGGGCTAACCGGCTGGTCATGTTTGACCCTGACTGGAACC TGGGGCTAACCGGCTGGTCATATTTGACCCTGACTGGAACC < 41bp 0.54400653591008 0.887680030802216 0.35463434 0.6663952 prediction 0.687346989784272 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46740289 chr1:46740290 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23217 0 0 1 0 2 Ribosome 0.438718596624337 0.438718529824713 0.3327904 0 hPsi_site_16941 iPseU_CNN:0.3327904;iRNA_PseU:0 16942 chr1 215768793 215768793 1 + G A UCEC 215768792 + 215768772 215768812 41 GGGAAAGTGGGAGTGTGGAATGCTGTCACTCAGCACTGGCA GGGAAAGTGGGAGTGTGGAATACTGTCACTCAGCACTGGCA < 41bp 0.538822736036309 0.882495628887739 0.2532692 0.3826121 prediction 0.68734578570286 Functional Gain - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215768792 chr1:215768793 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_23218 0 0 1 0 2 Ribosome 0.438737853123792 0.440305809859633 0 0 hPsi_site_16942 iPseU_CNN:0;iRNA_PseU:0 16943 chr12 131360300 131360300 1 + G A UCEC 131360299 + 131360279 131360319 41 AGTTGTCATGGACCCAGCTTTGGCAGCACAGTATGAGCACG AGTTGTCATGGACCCAGCTTTAGCAGCACAGTATGAGCACG < 41bp 0.544170205788498 0.887837091269103 0.16626218 0.22918001 prediction 0.68733377096121 Functional Gain - RAN ENSG00000132341 CDS Human protein_coding chr12:131360299 chr12:131360300 synonymous SNV 0.188 0 22 hPsi_associated_SNPs_23219 0 0 0 0 1 Ribosome 0.438723779578908 0.438690022534389 0 0 hPsi_site_16943 iPseU_CNN:0;iRNA_PseU:0 16944 chr7 87022069 87022069 1 + C A COAD 87022068 + 87022048 87022088 41 TTTGATCGTCACCTTTTAGGTCTCTTACTCATAGCAAAAGA TTTGATCGTCACCTTTTAGGTATCTTACTCATAGCAAAAGA < 41bp 0.497615927608479 0.843665933972733 0.25434035 0.7220089 prediction 0.687331867945465 Functional Gain - CROT ENSG00000005469 CDS Human protein_coding chr7:87022068 chr7:87022069 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_23220 0 0 0 0 2 Nucleus 0.438718335479259 0.438719142496425 0.4440178 0 hPsi_site_16944 iPseU_CNN:0.4440178;iRNA_PseU:0 16945 chr12 54403269 54403269 1 + C A PRAD 54403268 + 54403248 54403288 41 CCACCACGGCACCTCCGGCATCTCCAACTCAGGCTACCAGC CCACCACGGCACCTCCGGCATATCCAACTCAGGCTACCAGC < 41bp 0.502505453940465 0.846171310410993 0.24257529 0.42342648 prediction 0.687331712941056 Functional Gain - HOXC8 ENSG00000037965 CDS Human protein_coding chr12:54403268 chr12:54403269 synonymous SNV . 0 22 hPsi_associated_SNPs_23221 0 0 1 0 0 exosome 0.438712395468715 0.438718717859033 0 0 hPsi_site_16945 iPseU_CNN:0;iRNA_PseU:0 16946 chr17 51901425 51901425 1 + C T rs192040432 51901426 - 51901406 51901446 41 TTGAGGTCCAGCTTCTCATATGTGGAGTTTCTGAGCAGGAG TTGAGGTCCAGCTTCTCATATATGGAGTTTCTGAGCAGGAG < 41bp 0.47018246066543 0.843664725260878 0.31717688 0.35291275 prediction 0.687329450521757 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901426 chr17:51901425 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23222 0 0 0 0 0 exosome 0.438718595237278 0.438718593049834 0 0 hPsi_site_16946 iPseU_CNN:0;iRNA_PseU:0 16947 chr12 6437003 6437003 1 + G A BLCA 6437002 + 6436982 6437022 41 GAGCTGGCCAGCCAAAGGATTGAGGGGGCCGAGGAGCCCCG GAGCTGGCCAGCCAAAGGATTAAGGGGGCCGAGGAGCCCCG < 41bp 0.440468418715926 0.843657283997502 0.3110186 0.5360762 prediction 0.687314567995005 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6437002 chr12:6437003 nonsynonymous SNV 0.036 1 22 hPsi_associated_SNPs_23223 0 0 0 0 0 Nucleus 0.438718784254286 0.438274758305585 0.0721524 0 hPsi_site_16947 iPseU_CNN:0.0721524;iRNA_PseU:0 16948 chr6 161519386 161519386 1 + G A COAD 161519385 + 161519365 161519405 41 GCTGCTGCTGCTGCTGCTGTTGCTGCCAGTCGGCCCAGCCC GCTGCTGCTGCTGCTGCTGTTACTGCCAGTCGGCCCAGCCC < 41bp 0.550531474978413 0.894184971157838 0.29308373 0.69382 prediction 0.687306992358849 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519385 chr6:161519386 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23224 0 0 1 0 2 Cytosol 0.438718638774945 0.438719261916168 0.38764 0 hPsi_site_16948 iPseU_CNN:0.38764;iRNA_PseU:0 16949 chr19 15222217 15222217 1 + G A HNSC 15222216 + 15222196 15222236 41 AGTGCAGCGGTCTGCCTATCTGAGGACCTGTACCCCGATAT AGTGCAGCGGTCTGCCTATCTAAGGACCTGTACCCCGATAT < 41bp 0.442719908327366 0.843653163756529 0.39937222 0.5729106 prediction 0.687306327513058 Functional Gain - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15222216 chr19:15222217 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23225 0 0 0 0 2 exosome 0.439041002553781 0.438719050229471 0.1458212 0 hPsi_site_16949 iPseU_CNN:0.1458212;iRNA_PseU:0 16950 chr14 105930856 105930856 1 + G A UCEC 105930855 + 105930835 105930875 41 GAAATATGGTGGCTTGAAAATGCCAACCCGGTTAGATGGAG GAAATATGGTGGCTTGAAAATACCAACCCGGTTAGATGGAG < 41bp 0.447917881023528 0.843653031743765 0.2858376 0.48618606 prediction 0.68730606348753 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105930855 chr14:105930856 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23226 0 0 1 0 2 Cytosol 0.438717982793289 0.438713878482882 0 0 hPsi_site_16950 iPseU_CNN:0;iRNA_PseU:0 16951 chr7 150772567 150772567 1 + G A BLCA 150772566 + 150772546 150772586 41 GGAAGTCAAGGAGCAGCGGGTGACGGGGCTGCTGGTTGCCC GGAAGTCAAGGAGCAGCGGGTAACGGGGCTGCTGGTTGCCC < 41bp 0.44305433185689 0.843652124825576 0.19170031 0.6443148 prediction 0.687304249651153 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772566 chr7:150772567 synonymous SNV . 0 22 hPsi_associated_SNPs_23227 0 0 1 0 1 Ribosome 0.438718592628118 0.438718592995097 0.2886296 0 hPsi_site_16951 iPseU_CNN:0.2886296;iRNA_PseU:0 16952 chr3 14171031 14171031 1 + G A LAML 14171030 + 14171010 14171050 41 TGTGGGGCTCATGGCCTTCCTGCTCTCCTTCTACCTAATTT TGTGGGGCTCATGGCCTTCCTACTCTCCTTCTACCTAATTT < 41bp 0.435975864595536 0.84365084535827 0.46262515 0.7927403 prediction 0.68730169071654 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14171030 chr3:14171031 synonymous SNV . 0 22 hPsi_associated_SNPs_23228 0 0 1 0 1 Ribosome 0.438718636816056 0.438718600093734 0.5854806 0 hPsi_site_16952 iPseU_CNN:0.5854806;iRNA_PseU:0 16953 chr6 123318986 123318986 1 + G A SKCM 123318985 + 123318965 123319005 41 AAAGCTCGCCTGGAGCTCAATGAAAACCCAGACACGCTGCA AAAGCTCGCCTGGAGCTCAATAAAAACCCAGACACGCTGCA < 41bp 0.546215592427488 0.889866202697787 0.33190358 0.42578274 prediction 0.6873012205406 Functional Gain - CLVS2 ENSG00000146352 CDS Human protein_coding chr6:123318985 chr6:123318986 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_23229 0 0 0 0 0 exosome 0.438704797578637 0.438718596932712 0 0 hPsi_site_16953 iPseU_CNN:0;iRNA_PseU:0 16954 chr9 119461837 119461837 1 + G A LUAD 119461836 + 119461816 119461856 41 ATTCTCCATTTTCCTAAGGGTGGGGGCTATAGTGTCCTTAT ATTCTCCATTTTCCTAAGGGTAGGGGCTATAGTGTCCTTAT < 41bp 0.458662741621546 0.843648242060317 0.39500007 0.6458152 prediction 0.687296484120633 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461836 chr9:119461837 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_23230 0 0 0 0 0 chromatin 0.438718600824705 0.438718593286429 0.2916304 0 hPsi_site_16954 iPseU_CNN:0.2916304;iRNA_PseU:0 16955 chr10 134786941 134786941 1 + G A rs190420761 134786940 + 134786920 134786960 41 TGAGGCTGCCCTGGAGGGGTTGGAGCTGTGCCCACTGGGGA TGAGGCTGCCCTGGAGGGGTTAGAGCTGTGCCCACTGGGGA < 41bp 0.491208141574675 0.843646463665004 0.6095658 0.7373087 prediction 0.687292927330007 Functional Gain - LINC01168 ENSG00000240707 ncRNA_exonic Human lincRNA chr10:134786940 chr10:134786941 . . 0 22 hPsi_associated_SNPs_23231 0 0 0 0 0 unknown 0.438719228681927 0.438718532930348 0.2554858 0 hPsi_site_16955 iPseU_CNN:0.2554858;iRNA_PseU:0 16956 chr16 19680619 19680619 1 + C A BLCA 19680618 + 19680598 19680638 41 TTTTCTACTTTATTAATAGTTCCGGTACGTTTCCTCAGCAG TTTTCTACTTTATTAATAGTTACGGTACGTTTCCTCAGCAG < 41bp 0.494634713601606 0.843644063021834 0.25883022 0.7594631 prediction 0.687288126043669 Functional Gain - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19680618 chr16:19680619 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_23232 0 0 0 0 1 Cytosol 0.438727072013374 0.438676387547009 0.5189262 0 hPsi_site_16956 iPseU_CNN:0.5189262;iRNA_PseU:0 16957 chr4 134073017 134073017 1 + C A LUAD 134073016 + 134072996 134073036 41 AAATGACAACGCCCCTGCCATCGTGGCGCCTCTACCAGGGC AAATGACAACGCCCCTGCCATAGTGGCGCCTCTACCAGGGC < 41bp 0.490955168035565 0.843634372374017 0.21775123 0.25581366 prediction 0.687268744748034 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073016 chr4:134073017 synonymous SNV . 0 22 hPsi_associated_SNPs_23233 0 0 0 0 0 cytosol 0.436775477129588 0.438600790279806 0 0 hPsi_site_16957 iPseU_CNN:0;iRNA_PseU:0 16958 chr19 42728868 42728868 1 + G A BLCA 42728867 + 42728847 42728887 41 CCGGAGCTGGTGCCGGGTGCTGAGGGGCCCTTCCAGTGTGG CCGGAGCTGGTGCCGGGTGCTAAGGGGCCCTTCCAGTGTGG < 41bp 0.455982597289222 0.843631893543829 0.33038443 0.640562 prediction 0.687263787087657 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728867 chr19:42728868 nonsynonymous SNV 0.109 0 22 hPsi_associated_SNPs_23234 0 0 0 0 0 Cytosol 0.438719280587237 0.438718592995072 0.281124 0 hPsi_site_16958 iPseU_CNN:0.281124;iRNA_PseU:0 16959 chr10 60556202 60556202 1 + C A LUAD 60556201 + 60556181 60556221 41 GGGGTTACCATAGCAACCAGTCCATCCCCAGCATCCTGCCC GGGGTTACCATAGCAACCAGTACATCCCCAGCATCCTGCCC < 41bp 0.483578738430695 0.843628391757035 0.33680558 0.64035565 prediction 0.687256783514069 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60556201 chr10:60556202 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_23235 0 0 1 0 1 nucleus 0.438718593320053 0.438718592685486 0.2807113 0 hPsi_site_16959 iPseU_CNN:0.2807113;iRNA_PseU:0 16960 chr12 56630767 56630767 1 + C A UCEC 56630766 + 56630746 56630786 41 CCTCAGTACCACCTTAGCGGTCTTCTGCCATGAGCTGCCCC CCTCAGTACCACCTTAGCGGTATTCTGCCATGAGCTGCCCC < 41bp 0.481475051869533 0.843626183744845 0.29102945 0.7049838 prediction 0.687252367489689 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56630766 chr12:56630767 synonymous SNV . 0 22 hPsi_associated_SNPs_23236 0 0 1 0 2 cytosol 0.438718592995101 0.438718592995102 0.4099676 0 hPsi_site_16960 iPseU_CNN:0.4099676;iRNA_PseU:0 16961 chr1 12815709 12815709 1 + C A ACC 12815708 + 12815688 12815728 41 CAGAAAAGAATACATCCCCTTCCCAGACCACAGACCAGACC CAGAAAAGAATACATCCCCTTACCAGACCACAGACCAGACC < 41bp 0.492025162344866 0.84362283956485 0.29105103 0.65123814 prediction 0.6872456791297 Functional Gain - C1orf158 ENSG00000157330 CDS Human protein_coding chr1:12815708 chr1:12815709 nonsynonymous SNV 0.023 0 22 hPsi_associated_SNPs_23237 0 0 0 0 2 Cytosol 0.438718598725069 0.438718551410975 0.30247628 0 hPsi_site_16961 iPseU_CNN:0.30247628;iRNA_PseU:0 16962 chr7 150746323 150746323 1 + G A LUSC 150746322 + 150746302 150746342 41 TGGGTCTGCGCTGCTGGGCCTGGATCCCGCAGAGCACGCCG TGGGTCTGCGCTGCTGGGCCTAGATCCCGCAGAGCACGCCG < 41bp 0.45798669170347 0.843621168224166 0.23796773 0.42454946 prediction 0.687242336448332 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746322 chr7:150746323 synonymous SNV . 0 22 hPsi_associated_SNPs_23238 0 0 0 0 0 exosome 0.438718854330715 0.435264715981347 0 0 hPsi_site_16962 iPseU_CNN:0;iRNA_PseU:0 16963 chr12 129373237 129373237 1 + G A BLCA 129373236 + 129373216 129373256 41 GGAACTGATGTAAATGAAGATGCCAACCAGGCGGAAAAAAA GGAACTGATGTAAATGAAGATACCAACCAGGCGGAAAAAAA < 41bp 0.549761734077693 0.893376600819121 0.2952564 0.6674045 prediction 0.687229733482855 Functional Gain - GLT1D1 ENSG00000151948 CDS Human protein_coding chr12:129373236 chr12:129373237 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_23239 0 0 0 0 2 Cytosol 0.43871678903584 0.438718595370711 0.334809 0 hPsi_site_16963 iPseU_CNN:0.334809;iRNA_PseU:0 16964 chr10 51768776 51768776 1 + G A rs77193201 51768775 + 51768755 51768795 41 AAAGCGAAGTGGGAAATGGCTGAAGACATGGAAAAAGAAAT AAAGCGAAGTGGGAAATGGCTAAAGACATGGAAAAAGAAAT < 41bp 0.541179086238685 0.884778167926374 0.4639898 0.80458856 prediction 0.687198163375377 Functional Gain - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51768775 chr10:51768776 synonymous SNV . 0 22 hPsi_associated_SNPs_23240 0 0 0 0 0 chromatin 0.438719856451393 0.438718592998898 0.60917712 0 hPsi_site_16964 iPseU_CNN:0.60917712;iRNA_PseU:0 16965 chr16 31049458 31049458 1 + G A LUSC 31049457 + 31049437 31049477 41 AATGCTGGGATGGTGTCTGATGAGGAGTTGGAGCAGATGCT AATGCTGGGATGGTGTCTGATAAGGAGTTGGAGCAGATGCT < 41bp 0.437071531971169 0.843593578932901 0.22256672 0.24393344 prediction 0.687187157865802 Functional Gain - STX4 ENSG00000103496 CDS Human protein_coding chr16:31049457 chr16:31049458 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_23241 0 0 1 0 2 Ribosome 0.43871859292215 0.438718583426169 0 0 hPsi_site_16965 iPseU_CNN:0;iRNA_PseU:0 16966 chr19 6466540 6466540 1 + G A COAD 6466539 + 6466519 6466559 41 TTGGCTGCCTTGCTCCTGGCTGTGGGGCTGGCACTGTTGGT TTGGCTGCCTTGCTCCTGGCTATGGGGCTGGCACTGTTGGT < 41bp 0.542502105275678 0.886091934937319 0.2470069 0.2718727 prediction 0.687179659323283 Functional Gain - CRB3 ENSG00000130545 CDS Human protein_coding chr19:6466539 chr19:6466540 nonsynonymous SNV 0.341 0 22 hPsi_associated_SNPs_23242 0 0 1 0 1 Ribosome 0.438821154605157 0.439222167403096 0 0 hPsi_site_16966 iPseU_CNN:0;iRNA_PseU:0 16967 chr12 122691453 122691453 1 + G A rs553617934 122691452 + 122691432 122691472 41 CATTTCATGCTAAAGGGAGATGACGATGTCTTTGTCCACGT CATTTCATGCTAAAGGGAGATAACGATGTCTTTGTCCACGT < 41bp 0.442546602373607 0.843588773761438 0.19669363 0.31468433 prediction 0.687177547522876 Functional Gain - B3GNT4 ENSG00000176383 CDS Human protein_coding chr12:122691452 chr12:122691453 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_23243 0 0 0 0 0 chromatin 0.438718579241181 0.438718592995359 0 0 hPsi_site_16967 iPseU_CNN:0;iRNA_PseU:0 16968 chr10 70100979 70100979 1 + G A BLCA 70100978 + 70100958 70100998 41 GTTCATATTGATATTGGAGCTGATGGCAGAGCCACAGGAGA GTTCATATTGATATTGGAGCTAATGGCAGAGCCACAGGAGA < 41bp 0.45425241835936 0.843587390654126 0.2633978 0.33658993 prediction 0.687174781308253 Functional Gain - HNRNPH3 ENSG00000096746;ENSG00000204130 CDS Human other chr10:70100978 chr10:70100979 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23244 0 0 1 0 2 Cytosol 0.443881732303589 0.439020205213267 0 0 hPsi_site_16968 iPseU_CNN:0;iRNA_PseU:0 16969 chr11 119045171 119045171 1 + C A LUAD 119045170 + 119045150 119045190 41 TGCTCTTCCCAGGCCAGCATTCTGGTGACCACTCGGCCCTC TGCTCTTCCCAGGCCAGCATTATGGTGACCACTCGGCCCTC < 41bp 0.512833871176672 0.856419678473048 0.3968012 0.7370311 prediction 0.687171614592752 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119045170 chr11:119045171 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23245 0 0 0 0 1 exosome 0.438717509582616 0.438689803462725 0.4740622 0 hPsi_site_16969 iPseU_CNN:0.4740622;iRNA_PseU:0 16970 chr15 45410161 45410161 1 + C T UCEC 45410162 - 45410142 45410182 41 GGCCCAGGCCTGGCGGGCACTGCTTCCCGGCCTGCGATGTC GGCCCAGGCCTGGCGGGCACTACTTCCCGGCCTGCGATGTC < 41bp 0.522900037089104 0.866479546710939 0.17520139 0.46792966 prediction 0.68715901924367 Functional Gain - DUOXA1 ENSG00000140254 CDS Human protein_coding chr15:45410162 chr15:45410161 synonymous SNV . 0 22 hPsi_associated_SNPs_23246 0 0 0 0 1 Nucleus 0.43873729508184 0.438716959845888 0 0 hPsi_site_16970 iPseU_CNN:0;iRNA_PseU:0 16971 chr16 31090806 31090806 1 + G A UCEC 31090805 + 31090785 31090825 41 CTCAGCCCCGCCCCTTCCGCTGCAACCAGTGTGGCAAGACC CTCAGCCCCGCCCCTTCCGCTACAACCAGTGTGGCAAGACC < 41bp 0.452908376859271 0.843578636451515 0.38615805 0.70545155 prediction 0.68715727290303 Functional Gain - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31090805 chr16:31090806 nonsynonymous SNV 0.946 2 22 hPsi_associated_SNPs_23247 0 0 1 0 0 Endoplasmic reticulum 0.438718593668437 0.438718594958129 0.4109031 0 hPsi_site_16971 iPseU_CNN:0.4109031;iRNA_PseU:0 16972 chr1 171289034 171289034 1 + G A LUAD 171289033 + 171289013 171289053 41 TCCATCAAATGCTGTGTGGATGAGGACCTGGAGCCCACCTG TCCATCAAATGCTGTGTGGATAAGGACCTGGAGCCCACCTG < 41bp 0.447945920031935 0.843577693594755 0.4312902 0.6803217 prediction 0.68715538718951 Functional Gain - FMO4 ENSG00000076258 CDS Human protein_coding chr1:171289033 chr1:171289034 nonsynonymous SNV 0.637 4 22 hPsi_associated_SNPs_23248 0 0 0 0 2 cytosol 0.438719821823414 0.438719687761184 0.3606434 0 hPsi_site_16972 iPseU_CNN:0.3606434;iRNA_PseU:0 16973 chr20 61297832 61297832 1 + G A UCEC 61297831 + 61297811 61297851 41 CGCGGTCATCAAGTTCTGCCTGTTCTGCACCGTTGTCAGCC CGCGGTCATCAAGTTCTGCCTATTCTGCACCGTTGTCAGCC < 41bp 0.549802155273043 0.893374776826833 0.3452008 0.5538527 prediction 0.68714524310758 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61297831 chr20:61297832 synonymous SNV . 0 22 hPsi_associated_SNPs_23249 0 0 0 0 1 Endoplasmic reticulum 0.438473070188512 0.437595932781474 0.1077054 0 hPsi_site_16973 iPseU_CNN:0.1077054;iRNA_PseU:0 16974 chr12 113400570 113400570 1 + C A COAD 113400569 + 113400549 113400589 41 GGGCTGCAGGCAGGATTGTTTCAACATGGCCCAAGGCTTCC GGGCTGCAGGCAGGATTGTTTAAACATGGCCCAAGGCTTCC < 41bp 0.484818118246437 0.843570667764181 0.62539864 0.62340117 prediction 0.687141335528363 Functional Gain - OAS3 ENSG00000111331 CDS Human protein_coding chr12:113400569 chr12:113400570 nonsynonymous SNV 0.009 3 22 hPsi_associated_SNPs_23250 0 0 0 0 0 Nucleus 0.43871859299511 0.43871859301125 0 0 hPsi_site_16974 iPseU_CNN:0;iRNA_PseU:0 16975 chr3 43074794 43074794 1 + G A UCEC 43074793 + 43074773 43074813 41 CTGCGCCGGAGCCTACCTGCTGTGGCCCGCCGCTTCCATAG CTGCGCCGGAGCCTACCTGCTATGGCCCGCCGCTTCCATAG < 41bp 0.434780440154025 0.843566511044635 0.3229394 0.5336376 prediction 0.68713302208927 Functional Gain - FAM198A ENSG00000144649 CDS Human protein_coding chr3:43074793 chr3:43074794 nonsynonymous SNV 0.680 2 22 hPsi_associated_SNPs_23251 0 0 0 0 0 exosome 0.438763211220297 0.438718509299498 0.0672752000000001 0 hPsi_site_16975 iPseU_CNN:0.0672752000000001;iRNA_PseU:0 16976 chr17 73269676 73269676 1 + C T rs4789164 73269677 - 73269657 73269697 41 GGACTGTGCCAAGCAGGTGCTGCAAAAGGAAGGCGCCCTGG GGACTGTGCCAAGCAGGTGCTACAAAAGGAAGGCGCCCTGG < 41bp 0.546306916883042 0.889872129775967 0.2886439 0.46889734 prediction 0.687130425785851 Functional Gain - SLC25A19 ENSG00000125454 CDS Human protein_coding chr17:73269677 chr17:73269676 synonymous SNV . 0 22 hPsi_associated_SNPs_23252 2 0 1 0 1 Ribosome 0.438718592994964 0.438718592995099 0 0 hPsi_site_16976 iPseU_CNN:0;iRNA_PseU:0 16977 chr19 39898853 39898853 1 + C A UCEC 39898852 + 39898832 39898872 41 CGGCTCTCGCTGCCACTTCATCCACAACCCTAGCGAAGACC CGGCTCTCGCTGCCACTTCATACACAACCCTAGCGAAGACC < 41bp 0.5080235855762 0.851573095484295 0.35000288 0.8807316 prediction 0.687099019816191 Functional Gain - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898852 chr19:39898853 synonymous SNV . 0 22 hPsi_associated_SNPs_23253 0 0 0 0 0 nucleus 0.438718554505779 0.437733033812523 0.7614632 0 hPsi_site_16977 iPseU_CNN:0.7614632;iRNA_PseU:0 16978 chr3 141011816 141011816 1 + C A UCEC 141011815 + 141011795 141011835 41 AAGGTTTGCAGCCAGGTTGATCTTTGAGCTTTGGCAAGACA AAGGTTTGCAGCCAGGTTGATATTTGAGCTTTGGCAAGACA < 41bp 0.498822662612869 0.843548640975623 0.5029256 0.57189035 prediction 0.687097281951245 Functional Gain - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:141011815 chr3:141011816 synonymous SNV . 0 22 hPsi_associated_SNPs_23254 0 0 1 0 0 Ribosome 0.438718866178111 0.438718592902851 0.1379295 0 hPsi_site_16978 iPseU_CNN:0.1379295;iRNA_PseU:0 16979 chrX 47428427 47428427 1 + C A UCEC 47428426 + 47428406 47428446 41 TCATCCACCGAGATCTCAAGTCTAACAGTATCTATCTGTCC TCATCCACCGAGATCTCAAGTATAACAGTATCTATCTGTCC < 41bp 0.517477540042773 0.86102556404598 0.2281039 0.25718313 prediction 0.687096048006415 Functional Gain - ARAF ENSG00000078061 CDS Human protein_coding chrX:47428426 chrX:47428427 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23255 0 0 0 0 1 Cytosol 0.438718322977781 0.438745134826648 0 0 hPsi_site_16979 iPseU_CNN:0;iRNA_PseU:0 16980 chr7 158715184 158715184 1 + G A STAD 158715183 + 158715163 158715203 41 GACAGCAAATACGTCCTCTGTGTGTGGGATATTTGGCAGCC GACAGCAAATACGTCCTCTGTATGTGGGATATTTGGCAGCC < 41bp 0.43977417312874 0.843545920274836 0.34177703 0.49372563 prediction 0.687091840549673 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158715183 chr7:158715184 nonsynonymous SNV 0.924 3 22 hPsi_associated_SNPs_23256 0 0 1 0 1 Nucleus 0.398125136872086 0.435202885014915 0 0 hPsi_site_16980 iPseU_CNN:0;iRNA_PseU:0 16981 chr15 78566581 78566581 1 + G A UCEC 78566580 + 78566560 78566600 41 CGGTGGAGAAGTGCCCGCTGTGCAAGGGGCGGGGGATGCAG CGGTGGAGAAGTGCCCGCTGTACAAGGGGCGGGGGATGCAG < 41bp 0.430741056849472 0.843523711927379 0.57276386 0.9155692 prediction 0.687047423854758 Functional Gain - DNAJA4 ENSG00000140403 CDS Human protein_coding chr15:78566580 chr15:78566581 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_23257 0 0 0 0 1 Ribosome 0.438718530341825 0.438718534587226 0.68561068 0 hPsi_site_16981 iPseU_CNN:0.68561068;iRNA_PseU:0 16982 chr8 125464133 125464133 1 + G A COAD 125464132 + 125464112 125464152 41 AAGAAGGCTGGCCCATTGCCTGCCAAGTGTTAAGGCAGGAT AAGAAGGCTGGCCCATTGCCTACCAAGTGTTAAGGCAGGAT < 41bp 0.456019390012202 0.84351267911282 0.17939004 0.269404 prediction 0.687025358225639 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125464132 chr8:125464133 nonsynonymous SNV 0.919 4 22 hPsi_associated_SNPs_23258 0 0 0 0 0 Cytosol 0.438718516437153 0.43872708263591 0 0 hPsi_site_16982 iPseU_CNN:0;iRNA_PseU:0 16983 chr3 161214652 161214652 1 + G A SKCM 161214651 + 161214631 161214671 41 TATTTTGGCTATTGCTGGTATGAACACAATAGCAAAGACCA TATTTTGGCTATTGCTGGTATAAACACAATAGCAAAGACCA < 41bp 0.482061616406474 0.843505404595747 0.4212654 0.7127504 prediction 0.687010809191495 Functional Gain - OTOL1 ENSG00000182447 CDS Human protein_coding chr3:161214651 chr3:161214652 nonsynonymous SNV 0.657 1 22 hPsi_associated_SNPs_23259 0 0 0 0 0 exosome 0.438717272403639 0.437841887151503 0.4255008 0 hPsi_site_16983 iPseU_CNN:0.4255008;iRNA_PseU:0 16984 chr6 10725208 10725208 1 + G A LUSC 10725207 + 10725187 10725227 41 TTTTCAGAGTGCCTTTGCATTGGTTTGGCTTTGGCTACGCA TTTTCAGAGTGCCTTTGCATTAGTTTGGCTTTGGCTACGCA < 41bp 0.44876729036078 0.843505394599303 0.41140696 0.4257307 prediction 0.687010789198605 Functional Gain - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10725207 chr6:10725208 stopgain 0.969 0 22 hPsi_associated_SNPs_23260 0 0 1 0 1 Ribosome 0.438641212699789 0.43948289559808 0 0 hPsi_site_16984 iPseU_CNN:0;iRNA_PseU:0 16985 chr19 50214150 50214150 1 + C A rs148792995 50214149 + 50214129 50214169 41 CGCTTGAGGCTTCAGTTATTTCTGTGTACTCACTCATCCAC CGCTTGAGGCTTCAGTTATTTATGTGTACTCACTCATCCAC < 41bp 0.502521667660513 0.84602408680415 0.2887564 0.44793347 prediction 0.687004838287274 Functional Gain - CPT1C ENSG00000169169 intronic Human protein_coding chr19:50214149 chr19:50214150 . . 0 22 hPsi_associated_SNPs_23261 0 0 0 0 0 exosome 0.438734880809929 0.438718454898893 0 0 hPsi_site_16985 iPseU_CNN:0;iRNA_PseU:0 16986 chr19 45851252 45851252 1 + G A rs186054339 45851251 + 45851231 45851271 41 CAGGGTGGCTATGAGATCCCTGCCCGCCTTCGGACCCTGCA CAGGGTGGCTATGAGATCCCTACCCGCCTTCGGACCCTGCA < 41bp 0.550010989649288 0.893512657272601 0.220204 0.49225333 prediction 0.687003335246626 Functional Gain - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45851251 chr19:45851252 nonsynonymous SNV 0.016 3 22 hPsi_associated_SNPs_23262 0 0 0 0 1 nucleolus 0.438716295373372 0.438707208238612 0 0 hPsi_site_16986 iPseU_CNN:0;iRNA_PseU:0 16987 chr19 41822591 41822591 1 + G A LUSC 41822590 + 41822570 41822610 41 CGCTTCCGCACAGGCCTCCGTGAGGAGCATCTGGCCTGCTT CGCTTCCGCACAGGCCTCCGTAAGGAGCATCTGGCCTGCTT < 41bp 0.441947374612332 0.843498440588527 0.33667493 0.3706871 prediction 0.686996881177054 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822590 chr19:41822591 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23263 0 0 1 0 0 chromatin 0.438718593477876 0.438718585957076 0 0 hPsi_site_16987 iPseU_CNN:0;iRNA_PseU:0 16988 chr12 57843565 57843565 1 + G A SKCM 57843564 + 57843544 57843584 41 CCAGCCTGAGGGCTACGCCATGAACTTCTGCATAGGGCAGT CCAGCCTGAGGGCTACGCCATAAACTTCTGCATAGGGCAGT < 41bp 0.435057622492218 0.843484709908618 0.20440164 0.2445932 prediction 0.686969419817235 Functional Gain - INHBC ENSG00000175189 CDS Human protein_coding chr12:57843564 chr12:57843565 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_23264 0 0 0 0 0 exosome 0.438718039335089 0.438726501717162 0 0 hPsi_site_16988 iPseU_CNN:0;iRNA_PseU:0 16989 chr12 132589105 132589105 1 + G A UCEC 132589104 + 132589084 132589124 41 CTCCAGTGGTGGACACTTTGTGTTTCAGGATGGGTCAGGGC CTCCAGTGGTGGACACTTTGTATTTCAGGATGGGTCAGGGC < 41bp 0.539335058723269 0.882816927163987 0.44085783 0.7370429 prediction 0.686963736881437 Functional Gain - EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589104 chr12:132589105 synonymous SNV . 0 22 hPsi_associated_SNPs_23265 0 0 0 0 0 chromatin 0.43871878350489 0.438718645175745 0.4740858 0 hPsi_site_16989 iPseU_CNN:0.4740858;iRNA_PseU:0 16990 chr4 156838568 156838568 1 + G A rs144382797 156838567 + 156838547 156838587 41 GGAAGAGCCTAGGTTCCAGGTGCCTTTTCAGTTGCTGACTT GGAAGAGCCTAGGTTCCAGGTACCTTTTCAGTTGCTGACTT < 41bp 0.458943180548547 0.84347447868995 0.15609407 0.51026905 prediction 0.6869489573799 Functional Gain - TDO2 ENSG00000151790 CDS Human protein_coding chr4:156838567 chr4:156838568 synonymous SNV . 0 22 hPsi_associated_SNPs_23266 0 0 0 0 2 exosome 0.43871683317178 0.438596337851623 0.0205381 0 hPsi_site_16990 iPseU_CNN:0.0205381;iRNA_PseU:0 16991 chr17 7578227 7578227 1 + C T BLCA 7578228 - 7578208 7578248 41 TTGCGTGTGGAGTATTTGGATGACAGAAACACTTTTCGACA TTGCGTGTGGAGTATTTGGATAACAGAAACACTTTTCGACA < 41bp 0.484539365968429 0.843465821686623 0.47750217 0.7250005 prediction 0.686931643373246 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578228 chr17:7578227 nonsynonymous SNV 0.720 5 22 hPsi_associated_SNPs_23267 0 0 1 0 3 Ribosome 0.43871855014036 0.438719259089193 0.450001 0 hPsi_site_16991 iPseU_CNN:0.450001;iRNA_PseU:0 16992 chrX 100506039 100506039 1 + C A UCEC 100506038 + 100506018 100506058 41 TGAAGCATCAGACCAAGTGCTCTATCTGTAGGCAGTGCCCC TGAAGCATCAGACCAAGTGCTATATCTGTAGGCAGTGCCCC < 41bp 0.484997178687336 0.843464514664136 0.27009 0.3916576 prediction 0.686929029328272 Functional Gain - DRP2 ENSG00000102385 CDS Human protein_coding chrX:100506038 chrX:100506039 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23268 0 0 0 0 1 nucleoplasm 0.438718595165969 0.438594740578595 0 0 hPsi_site_16992 iPseU_CNN:0;iRNA_PseU:0 16993 chr21 27124407 27124407 1 + G A OV 27124406 + 27124386 27124426 41 GAATCAGAAGCACATCTTGTTGAAGAAGCTCAAGTGATAAC GAATCAGAAGCACATCTTGTTAAAGAAGCTCAAGTGATAAC < 41bp 0.465005493157376 0.843461346303966 0.33786833 0.70315826 prediction 0.686922692607931 Functional Gain - GABPA ENSG00000154727 CDS Human protein_coding chr21:27124406 chr21:27124407 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23269 0 0 0 0 0 Cytosol 0.439015742098954 0.439649091964184 0.40631652 0 hPsi_site_16993 iPseU_CNN:0.40631652;iRNA_PseU:0 16994 chr9 968299 968299 1 + G A rs141780330 968298 + 968278 968318 41 TCCAGAGGCTGTAACACATTTGTAATACTTTAGGGTCCGTG TCCAGAGGCTGTAACACATTTATAATACTTTAGGGTCCGTG < 41bp 0.520552587531189 0.864012422918079 0.24642837 0.36298776 prediction 0.686919670773779 Functional Gain - DMRT1 ENSG00000137090 UTR3 Human protein_coding chr9:968298 chr9:968299 . . 0 22 hPsi_associated_SNPs_23270 0 0 1 0 0 unknown 0.438719053364844 0.438717850367881 0 0 hPsi_site_16994 iPseU_CNN:0;iRNA_PseU:0 16995 chr20 2083497 2083497 1 + G A LUSC 2083496 + 2083476 2083516 41 GGCCCGGGCAGCGCCGTTGCTGCTCCCCCCGCCGCCCGCAG GGCCCGGGCAGCGCCGTTGCTACTCCCCCCGCCGCCCGCAG < 41bp 0.458462154383791 0.843450378939641 0.4268261 0.880347 prediction 0.686900757879282 Functional Gain - STK35 ENSG00000125834 CDS Human protein_coding chr20:2083496 chr20:2083497 synonymous SNV . 0 22 hPsi_associated_SNPs_23271 0 0 1 0 0 Ribosome 0.438718592995102 0.43871859299015 0.760694 0 hPsi_site_16995 iPseU_CNN:0.760694;iRNA_PseU:0 16996 chr19 15640580 15640580 1 + G A PRAD 15640579 + 15640559 15640599 41 GTACTGGACAACATGCACCATGTACTCTTGGTATGGATGGG GTACTGGACAACATGCACCATATACTCTTGGTATGGATGGG < 41bp 0.435318648372397 0.843449658168388 0.21267349 0.38084912 prediction 0.686899316336776 Functional Gain - CYP4F22 ENSG00000171954 CDS Human protein_coding chr19:15640579 chr19:15640580 nonsynonymous SNV 0.080 1 22 hPsi_associated_SNPs_23272 0 0 0 0 2 exosome 0.438804264277958 0.438673119153696 0 0 hPsi_site_16996 iPseU_CNN:0;iRNA_PseU:0 16997 chr10 112839008 112839008 1 + G A CESC 112839007 + 112838987 112839027 41 CACGGCCGTCGGGTGCTCCGTGCCACGCACGCTCTTCAAAT CACGGCCGTCGGGTGCTCCGTACCACGCACGCTCTTCAAAT < 41bp 0.53599254054355 0.879441089038481 0.3625883 0.9280402 prediction 0.686897096989862 Functional Gain - ADRA2A ENSG00000150594 CDS Human protein_coding chr10:112839007 chr10:112839008 synonymous SNV . 0 22 hPsi_associated_SNPs_23273 0 0 0 0 0 exosome 0.436671376798883 0.437808837458357 0.8560804 0 hPsi_site_16997 iPseU_CNN:0.8560804;iRNA_PseU:0 16998 chrX 46433657 46433657 1 + G A rs202021438 46433656 + 46433636 46433676 41 CGGCGCTGTCGGGGAGGCAGTGTCTCGCGAGAAGCAGCACA CGGCGCTGTCGGGGAGGCAGTATCTCGCGAGAAGCAGCACA < 41bp 0.540602752549796 0.884039257658226 0.42155847 0.7071576 prediction 0.686873010216861 Functional Gain - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46433656 chrX:46433657 synonymous SNV . 0 22 hPsi_associated_SNPs_23274 0 0 0 0 0 Endoplasmic reticulum 0.438695944226079 0.438736904411897 0.4143152 0 hPsi_site_16998 iPseU_CNN:0.4143152;iRNA_PseU:0 16999 chr13 50204764 50204764 1 + C A UCEC 50204763 + 50204743 50204783 41 CCTGGGCACGTGTCACTGACTCTCTGGGACGTTGGGGGGCA CCTGGGCACGTGTCACTGACTATCTGGGACGTTGGGGGGCA < 41bp 0.494115647731552 0.843434762958682 0.3087706 0.5938981 prediction 0.686869525917364 Functional Gain - ARL11 ENSG00000152213 CDS Human protein_coding chr13:50204763 chr13:50204764 nonsynonymous SNV 0.622 2 22 hPsi_associated_SNPs_23275 0 0 0 0 0 Nucleus 0.43871862478093 0.438719199595905 0.1877962 0 hPsi_site_16999 iPseU_CNN:0.1877962;iRNA_PseU:0 17000 chr10 75559113 75559113 1 + G A CESC 75559112 + 75559092 75559132 41 GCATGGCCACTCCCCTGGCCTGCACCCCTACACTGCTCTAC GCATGGCCACTCCCCTGGCCTACACCCCTACACTGCTCTAC < 41bp 0.515906819796742 0.859339074770725 0.35512936 0.47901773 prediction 0.686864509947966 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75559112 chr10:75559113 synonymous SNV . 0 22 hPsi_associated_SNPs_23276 0 0 1 0 0 Cytosol 0.438718597997721 0.438727888527418 0 0 hPsi_site_17000 iPseU_CNN:0;iRNA_PseU:0 17001 chr10 96260020 96260020 1 + G A UCEC 96260019 + 96259999 96260039 41 AGAATTGTGGTGGCAGGGATTGCCCCCTAGTGTCCGTGGGA AGAATTGTGGTGGCAGGGATTACCCCCTAGTGTCCGTGGGA < 41bp 0.441681695163317 0.843431897442585 0.22747281 0.5116833 prediction 0.686863794885171 Functional Gain - TBC1D12 ENSG00000108239 CDS Human protein_coding chr10:96260019 chr10:96260020 synonymous SNV . 0 22 hPsi_associated_SNPs_23277 0 0 1 0 2 chromatin 0.438718230023327 0.438718592975797 0.0233665999999999 0 hPsi_site_17001 iPseU_CNN:0.0233665999999999;iRNA_PseU:0 17002 chr5 31534480 31534480 1 + G A UCEC 31534479 + 31534459 31534499 41 TCCAGACCTCCTTATTCCTGTGAATATGCCAGCAGACACCG TCCAGACCTCCTTATTCCTGTAAATATGCCAGCAGACACCG < 41bp 0.452032610490881 0.843427519036222 0.27644178 0.30262625 prediction 0.686855038072443 Functional Gain - C5orf22 ENSG00000082213 CDS Human protein_coding chr5:31534479 chr5:31534480 synonymous SNV . 0 22 hPsi_associated_SNPs_23278 0 0 1 2 1 Ribosome 0.43856221478641 0.437056228615516 0 0 hPsi_site_17002 iPseU_CNN:0;iRNA_PseU:0 17003 chr11 64939427 64939427 1 + C A LUAD 64939426 + 64939406 64939446 41 ACCCTCAGAGGACAGTTTTGTCCAGGAATTCCTCTCCAAAG ACCCTCAGAGGACAGTTTTGTACAGGAATTCCTCTCCAAAG < 41bp 0.490286115444133 0.843423314077627 0.28777617 0.7145025 prediction 0.686846628155255 Functional Gain - SPDYC ENSG00000204710 CDS Human protein_coding chr11:64939426 chr11:64939427 synonymous SNV . 0 22 hPsi_associated_SNPs_23279 0 0 0 0 2 nucleolus 0.438717665419822 0.438746890924829 0.429005 0 hPsi_site_17003 iPseU_CNN:0.429005;iRNA_PseU:0 17004 chr3 52011973 52011973 1 + G A PRAD 52011972 + 52011952 52011992 41 GCTCCTACTGTATGTGGGGCTGCCAGGCCCCCCTGAGCAGA GCTCCTACTGTATGTGGGGCTACCAGGCCCCCCTGAGCAGA < 41bp 0.548066628826799 0.891488316450295 0.24497658 0.37238103 prediction 0.686843375246991 Functional Gain - ABHD14A;ABHD14A-ACY1 ENSG00000114786;ENSG00000243989;ENSG00000248487 CDS Human other chr3:52011972 chr3:52011973 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23280 0 0 1 0 1 unknown 0.438718591873609 0.438718592503808 0 0 hPsi_site_17004 iPseU_CNN:0;iRNA_PseU:0 17005 chr13 37580090 37580090 1 + C A rs140108815 37580089 + 37580069 37580109 41 ATCTACCACCCCTGTGTTCATCGAGATTCCGGTCTGGACCT ATCTACCACCCCTGTGTTCATAGAGATTCCGGTCTGGACCT < 41bp 0.503518045133518 0.846933533822072 0.23288175 0.37867755 prediction 0.686830977377109 Functional Gain - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37580089 chr13:37580090 stopgain 0.993 1 22 hPsi_associated_SNPs_23281 0 0 1 0 2 Ribosome 0.438569606184207 0.438736488608574 0 0 hPsi_site_17005 iPseU_CNN:0;iRNA_PseU:0 17006 chr11 89885504 89885504 1 + C A LUAD 89885503 + 89885483 89885523 41 AGCAGGAGCCATAGGAATCATCTTGTACTCAGATCCAGCTG AGCAGGAGCCATAGGAATCATATTGTACTCAGATCCAGCTG < 41bp 0.507010759177676 0.85042052635527 0.2354522 0.22509474 prediction 0.686819534355187 Functional Gain - NAALAD2 ENSG00000077616 CDS Human protein_coding chr11:89885503 chr11:89885504 synonymous SNV . 0 22 hPsi_associated_SNPs_23282 0 0 0 0 1 insoluble cytoplasm 0.433711017817536 0.438574347515757 0 0 hPsi_site_17006 iPseU_CNN:0;iRNA_PseU:0 17007 chr6 27833390 27833390 1 + G A COAD 27833389 + 27833369 27833409 41 TATCCCGCGCCACTTGCAGCTGGCCATCCGCAACGACGAGG TATCCCGCGCCACTTGCAGCTAGCCATCCGCAACGACGAGG < 41bp 0.464608140921588 0.843408228806786 0.14950067 0.60140896 prediction 0.686816457613573 Functional Gain - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833389 chr6:27833390 synonymous SNV . 0 22 hPsi_associated_SNPs_23283 0 0 1 0 0 exosome 0.438718592998417 0.438705306942493 0.20281792 0 hPsi_site_17007 iPseU_CNN:0.20281792;iRNA_PseU:0 17008 chr2 85663680 85663680 1 + G A rs76432883 85663679 + 85663659 85663699 41 GCGGCAGCCGGGAACTCACCTGCCTGCTCTTCCCCACCAAG GCGGCAGCCGGGAACTCACCTACCTGCTCTTCCCCACCAAG < 41bp 0.546751140190822 0.890156851824438 0.36154282 0.6899011 prediction 0.686811423267232 Functional Gain - SH2D6 ENSG00000152292 CDS Human protein_coding chr2:85663679 chr2:85663680 nonsynonymous SNV 0.973 0 22 hPsi_associated_SNPs_23284 0 0 0 7 2 exosome 0.438718592995099 0.438718593095639 0.3798022 0 hPsi_site_17008 iPseU_CNN:0.3798022;iRNA_PseU:0 17009 chr22 51040265 51040265 1 + C A UCEC 51040264 + 51040244 51040284 41 AATTTGACGACGAAGATCTGTCTGAGATCACTGATGACTGT AATTTGACGACGAAGATCTGTATGAGATCACTGATGACTGT < 41bp 0.514131240118402 0.857525115869213 0.3947565 0.5425811 prediction 0.686787751501622 Functional Gain - MAPK8IP2 ENSG00000008735 CDS Human protein_coding chr22:51040264 chr22:51040265 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23285 0 0 1 0 2 exosome 0.436600572441029 0.437685457060624 0.0851622000000001 0 hPsi_site_17009 iPseU_CNN:0.0851622000000001;iRNA_PseU:0 17010 chr9 34971607 34971607 1 + C A UCEC 34971606 + 34971586 34971626 41 TCGATTCACACCCCCTGCGTTCATCCGCCCCACCCGGAAGC TCGATTCACACCCCCTGCGTTAATCCGCCCCACCCGGAAGC < 41bp 0.516444466841808 0.859834420856385 0.5648187 0.579787 prediction 0.686779908029154 Functional Gain - PHF24 ENSG00000122733 CDS Human protein_coding chr9:34971606 chr9:34971607 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_23286 0 0 0 0 1 exosome 0.438718549489141 0.438718594440792 0.0299366000000001 0 hPsi_site_17010 iPseU_CNN:0.0299366000000001;iRNA_PseU:0 17011 chr20 55204608 55204608 1 + G A SKCM 55204607 + 55204587 55204627 41 GGACGCCGGACGCCATGTTGTGGAAAATAACCGATAATGTC GGACGCCGGACGCCATGTTGTAGAAAATAACCGATAATGTC < 41bp 0.542028547350298 0.885417788361741 0.22013944 0.3483773 prediction 0.686778482022886 Functional Gain - TFAP2C ENSG00000087510 CDS Human protein_coding chr20:55204607 chr20:55204608 stopgain 1.000 0 22 hPsi_associated_SNPs_23287 0 0 0 0 1 Cytosol 0.438709648531199 0.43925109777689 0 0 hPsi_site_17011 iPseU_CNN:0;iRNA_PseU:0 17012 chr9 126134517 126134517 1 + G A STAD 126134516 + 126134496 126134536 41 GGAATGACTTCCACTGTACCTGCCCTGCCAATTTCACGGGG GGAATGACTTCCACTGTACCTACCCTGCCAATTTCACGGGG < 41bp 0.436691665360795 0.843387500853683 0.23511916 0.5354643 prediction 0.686775001707366 Functional Gain - CRB2 ENSG00000148204 CDS Human protein_coding chr9:126134516 chr9:126134517 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_23288 0 0 0 0 1 exosome 0.438718618317635 0.438718736040275 0.0709286 0 hPsi_site_17012 iPseU_CNN:0.0709286;iRNA_PseU:0 17013 chr17 40765019 40765019 1 + G A HNSC 40765018 + 40764998 40765038 41 GTTTCCCAACCAGGACGAGATGAGCGATGTGGTGGTCCAGC GTTTCCCAACCAGGACGAGATAAGCGATGTGGTGGTCCAGC < 41bp 0.44284108285656 0.843384155255172 0.2558843 0.46915624 prediction 0.686768310510343 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765018 chr17:40765019 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_23289 0 0 1 0 2 Ribosome 0.438735274595314 0.438726396012431 0 0 hPsi_site_17013 iPseU_CNN:0;iRNA_PseU:0 17014 chr13 48651426 48651426 1 + G A SKCM 48651425 + 48651405 48651445 41 GACATGTCATTTGACTGCCATGGATACTGTGGAGCAAGGAC GACATGTCATTTGACTGCCATAGATACTGTGGAGCAAGGAC < 41bp 0.531693699117056 0.875075260070157 0.18637699 0.27190858 prediction 0.686763121906202 Functional Gain - MED4 ENSG00000136146 CDS Human protein_coding chr13:48651425 chr13:48651426 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23290 0 0 0 0 1 Cytosol 0.438553877111428 0.438595341821356 0 0 hPsi_site_17014 iPseU_CNN:0;iRNA_PseU:0 17015 chr8 22974392 22974392 1 + G A BLCA 22974391 + 22974371 22974411 41 GGGACTCCTGCCCCAGCTGCTGAAGAGACAATGACCACCAG GGGACTCCTGCCCCAGCTGCTAAAGAGACAATGACCACCAG < 41bp 0.484210631557233 0.84337850285946 0.3031127 0.49898535 prediction 0.686757005718921 Functional Gain - TNFRSF10C ENSG00000173535 CDS Human protein_coding chr8:22974391 chr8:22974392 nonsynonymous SNV 0.050 1 22 hPsi_associated_SNPs_23291 0 0 0 0 0 exosome 0.438717551134264 0.438718592601665 0 0 hPsi_site_17015 iPseU_CNN:0;iRNA_PseU:0 17016 chr2 27263644 27263644 1 + G A LUSC 27263643 + 27263623 27263663 41 CTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTG CTGTCCACTGGACCTGGCTTTACCTACAGGACATTACAGTG < 41bp 0.541187749474487 0.884564335430816 0.15148002 0.33742982 prediction 0.686753171912658 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27263643 chr2:27263644 nonsynonymous SNV 0.611 0 22 hPsi_associated_SNPs_23292 0 0 1 0 1 Ribosome 0.438327716958398 0.438862034393113 0 0 hPsi_site_17016 iPseU_CNN:0;iRNA_PseU:0 17017 chr1 156255380 156255380 1 + G A COAD 156255379 + 156255359 156255399 41 CGAAGACGATGCCAACCTGCTGCCTGAGAAAGCGGCCCGTG CGAAGACGATGCCAACCTGCTACCTGAGAAAGCGGCCCGTG < 41bp 0.431690938421389 0.843369405812522 0.38247687 0.8958888 prediction 0.686738811625044 Functional Gain - TMEM79 ENSG00000163472 CDS Human protein_coding chr1:156255379 chr1:156255380 synonymous SNV . 0 22 hPsi_associated_SNPs_23293 0 0 1 0 1 cytosol 0.438755851723228 0.438790279675453 0.7917776 0 hPsi_site_17017 iPseU_CNN:0.7917776;iRNA_PseU:0 17018 chr10 99344586 99344586 1 + G A SKCM 99344585 + 99344565 99344605 41 TGCGGGTATCTACCCCCCTGTGACCACCCCCTTCACTGCCA TGCGGGTATCTACCCCCCTGTAACCACCCCCTTCACTGCCA < 41bp 0.434551668124794 0.843369051052195 0.1491423 0.31437123 prediction 0.686738102104389 Functional Gain - HOGA1 ENSG00000155252;ENSG00000241935;ENSG00000249967 CDS Human other chr10:99344585 chr10:99344586 synonymous SNV . 0 22 hPsi_associated_SNPs_23294 0 0 0 0 1 nucleus 0.438170651213494 0.438718592995699 0 0 hPsi_site_17018 iPseU_CNN:0;iRNA_PseU:0 17019 chr19 3123484 3123484 1 + G A rs149543202 3123483 + 3123463 3123503 41 CAACCCCCACCCTTGCCACGTGTGGGGCCACGTGGGCATGT CAACCCCCACCCTTGCCACGTATGGGGCCACGTGGGCATGT < 41bp 0.51255265347396 0.855920828392371 0.34507787 0.6949685 prediction 0.686736349836822 Functional Gain - GNA11 ENSG00000088256 UTR3 Human protein_coding chr19:3123483 chr19:3123484 . . 0 22 hPsi_associated_SNPs_23295 0 0 1 0 0 Cytosol 0.438933675376255 0.438946251439365 0.389937 0 hPsi_site_17019 iPseU_CNN:0.389937;iRNA_PseU:0 17020 chr2 228786229 228786229 1 + G A SKCM 228786228 + 228786208 228786248 41 GTTCTTGAGGGGCACACTGATGAAATCTTTTCATGTGCTTT GTTCTTGAGGGGCACACTGATAAAATCTTTTCATGTGCTTT < 41bp 0.453703088111811 0.843367612561004 0.28548175 0.37269503 prediction 0.686735225122007 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228786228 chr2:228786229 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_23296 0 0 0 0 1 exosome 0.438718591866903 0.438718590323258 0 0 hPsi_site_17020 iPseU_CNN:0;iRNA_PseU:0 17021 chr10 75674567 75674567 1 + G A LUAD 75674566 + 75674546 75674586 41 TCCGTTCCAAGGAGGGCAGGTGTGCGCAGCCATCCCGGACT TCCGTTCCAAGGAGGGCAGGTATGCGCAGCCATCCCGGACT < 41bp 0.431028151269663 0.843364846024595 0.3505301 0.7661139 prediction 0.68672969204919 Functional Gain - PLAU ENSG00000122861 CDS Human protein_coding chr10:75674566 chr10:75674567 nonsynonymous SNV 0.709 4 22 hPsi_associated_SNPs_23297 0 0 0 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0.5322278 0 hPsi_site_17021 iPseU_CNN:0.5322278;iRNA_PseU:0 17022 chr19 44222839 44222839 1 + C A HNSC 44222838 + 44222818 44222858 41 CCCCCAGGCCGCCTCTCACCTCCAGGAGCTGCTGGCCTCCA CCCCCAGGCCGCCTCTCACCTACAGGAGCTGCTGGCCTCCA < 41bp 0.505732948060234 0.849096881257365 0.26879486 0.40582067 prediction 0.686727866394262 Functional Gain - IRGC ENSG00000124449 CDS Human protein_coding chr19:44222838 chr19:44222839 synonymous SNV . 0 22 hPsi_associated_SNPs_23298 0 0 0 0 0 unknown 0.438718647799296 0.43871859222509 0 0 hPsi_site_17022 iPseU_CNN:0;iRNA_PseU:0 17023 chr6 13592024 13592024 1 + G A BLCA 13592023 + 13592003 13592043 41 CACCGCGCCATAGCCGAGTGTGAGACCCGGCTGGGCAAGCA CACCGCGCCATAGCCGAGTGTAAGACCCGGCTGGGCAAGCA < 41bp 0.425046867314363 0.843362611850449 0.51385516 0.8079177 prediction 0.686725223700899 Functional Gain - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13592023 chr6:13592024 nonsynonymous SNV 0.105 4 22 hPsi_associated_SNPs_23299 0 0 0 0 0 Nucleus 0.43871854320616 0.438624361610609 0.58812508 0 hPsi_site_17023 iPseU_CNN:0.58812508;iRNA_PseU:0 17024 chr20 62659867 62659867 1 + G A LIHC 62659866 + 62659846 62659886 41 GCTGGAGTACCGTGCGGGGCTGAAGAACATCGCAAATACAC GCTGGAGTACCGTGCGGGGCTAAAGAACATCGCAAATACAC < 41bp 0.437144614550848 0.843362281713519 0.26986486 0.39555553 prediction 0.686724563427038 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62659866 chr20:62659867 synonymous SNV . 0 22 hPsi_associated_SNPs_23300 0 0 1 0 2 Cytosol 0.438222415747949 0.438718282994554 0 0 hPsi_site_17024 iPseU_CNN:0;iRNA_PseU:0 17025 chr1 110168016 110168016 1 + G A UCEC 110168015 + 110167995 110168035 41 CAAGCACTTCCCGCTCGACCTGCGCACGTCTATGGATGGCA CAAGCACTTCCCGCTCGACCTACGCACGTCTATGGATGGCA < 41bp 0.534826238379455 0.878186022313668 0.28860724 0.45627135 prediction 0.686719567868426 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168015 chr1:110168016 synonymous SNV . 0 22 hPsi_associated_SNPs_23301 0 0 1 0 2 Cytosol 0.430837007418058 0.431451024951558 0 0 hPsi_site_17025 iPseU_CNN:0;iRNA_PseU:0 17026 chr20 62311271 62311271 1 + G A BRCA 62311270 + 62311250 62311290 41 GGGCTGCATCCTGGACTCGCTGGACCAGATCATCCAGCACC GGGCTGCATCCTGGACTCGCTAGACCAGATCATCCAGCACC < 41bp 0.440363159629089 0.843356549348654 0.23946407 0.5456043 prediction 0.686713098697308 Functional Gain - RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62311270 chr20:62311271 synonymous SNV . 0 22 hPsi_associated_SNPs_23302 0 0 1 0 2 chromatin 0.438717369859422 0.440124458853528 0.0912086000000001 0 hPsi_site_17026 iPseU_CNN:0.0912086000000001;iRNA_PseU:0 17027 chr5 115249401 115249401 1 + G A rs199516388 115249400 + 115249380 115249420 41 GAAATTGAGTAGTTCCTATGTGATTTTTTTTTTTCTTTTCT GAAATTGAGTAGTTCCTATGTAATTTTTTTTTTTCTTTTCT < 41bp 0.496743589136254 0.843351347452243 0.2760639 0.31925493 prediction 0.686702694904485 Functional Gain - AP3S1 ENSG00000177879 UTR3 Human protein_coding chr5:115249400 chr5:115249401 . . 0 22 hPsi_associated_SNPs_23303 0 0 1 4 0 Ribosome 0.438718549778743 0.438711946124511 0 0 hPsi_site_17027 iPseU_CNN:0;iRNA_PseU:0 17028 chr1 110883036 110883036 1 + G A BLCA 110883035 + 110883015 110883055 41 GAAAGAGACTACCCGTTCTATGAGAGAGTGCGCCCTGCATA GAAAGAGACTACCCGTTCTATAAGAGAGTGCGCCCTGCATA < 41bp 0.540257966872091 0.883604680071023 0.32162535 0.683512 prediction 0.686693426397863 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883035 chr1:110883036 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23304 0 0 1 0 0 Nucleus 0.438720316146024 0.438880529884 0.367024 0 hPsi_site_17028 iPseU_CNN:0.367024;iRNA_PseU:0 17029 chr3 10970929 10970929 1 + G A UCEC 10970928 + 10970908 10970948 41 GGTGACCGCCGTGGTGGACATGTACCCCAAGGTTTTCCGGA GGTGACCGCCGTGGTGGACATATACCCCAAGGTTTTCCGGA < 41bp 0.539708149990074 0.883050931694064 0.4255575 0.6333225 prediction 0.686685563407978 Functional Gain - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10970928 chr3:10970929 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23305 0 0 1 0 2 cytosol 0.438688525263867 0.438719669035275 0.266645 0 hPsi_site_17029 iPseU_CNN:0.266645;iRNA_PseU:0 17030 chr22 29885681 29885681 1 + G A SKCM 29885680 + 29885660 29885700 41 TGAGAAGGCCAAGTCCCCAGTGAAGGCAGAAGCAAAGTCCC TGAGAAGGCCAAGTCCCCAGTAAAGGCAGAAGCAAAGTCCC < 41bp 0.444303470257546 0.843342294654624 0.29358888 0.5409492 prediction 0.686684589309247 Functional Gain - NEFH ENSG00000100285 CDS Human protein_coding chr22:29885680 chr22:29885681 synonymous SNV . 0 22 hPsi_associated_SNPs_23306 0 0 0 0 0 cytosol 0.438718592995052 0.438718592995102 0.0818984 0 hPsi_site_17030 iPseU_CNN:0.0818984;iRNA_PseU:0 17031 chrX 129629150 129629150 1 + G A LUSC 129629149 + 129629129 129629169 41 GAAGATGGCTGCGGCCGAGTTGGCGGACACTCAGCTGATGC GAAGATGGCTGCGGCCGAGTTAGCGGACACTCAGCTGATGC < 41bp 0.538357647124183 0.881695853553509 0.2517016 0.6178617 prediction 0.686676412858652 Functional Gain - FAM45BP ENSG00000221930;ENSG00000229702 ncRNA_exonic Human other chrX:129629149 chrX:129629150 . . 0 22 hPsi_associated_SNPs_23307 0 0 0 0 0 unknown 0.438729581210178 0.43871816853843 0.2357234 0 hPsi_site_17031 iPseU_CNN:0.2357234;iRNA_PseU:0 17032 chr14 60585328 60585328 1 + G A rs61735914 60585327 + 60585307 60585347 41 AGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACT AGCAGGCACCACAGCCTGTGTATGTGCAGATACAGTGTACT < 41bp 0.551084924601616 0.894420332091218 0.21116409 0.23413765 prediction 0.686670814979204 Functional Gain - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60585327 chr14:60585328 synonymous SNV . 0 22 hPsi_associated_SNPs_23308 0 0 1 0 1 Endoplasmic reticulum 0.436514562045338 0.437875907272017 0 0 hPsi_site_17032 iPseU_CNN:0;iRNA_PseU:0 17033 chr2 99149902 99149902 1 + G A UCEC 99149901 + 99149881 99149921 41 AATAGTTTTGTTGCGGTGAGTGTCACCACCCCTCCTCAGGC AATAGTTTTGTTGCGGTGAGTATCACCACCCCTCCTCAGGC < 41bp 0.451646931611374 0.84333426209329 0.32746577 0.6568357 prediction 0.68666852418658 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99149901 chr2:99149902 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23309 0 0 1 0 2 Ribosome 0.438715711754739 0.438718428902352 0.3136714 0 hPsi_site_17033 iPseU_CNN:0.3136714;iRNA_PseU:0 17034 chr1 22838407 22838407 1 + C A READ 22838406 + 22838386 22838426 41 CTGCGACAAAAGCTTCCATTTCTACTGCCGCCTAAAGGTGC CTGCGACAAAAGCTTCCATTTATACTGCCGCCTAAAGGTGC < 41bp 0.503876260911583 0.847205556910435 0.6264124 0.66331655 prediction 0.686658591997704 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22838406 chr1:22838407 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23310 0 0 1 0 0 Nucleus 0.438777336528794 0.439407181326608 0.0738083 0 hPsi_site_17034 iPseU_CNN:0.0738083;iRNA_PseU:0 17035 chr1 159175306 159175306 1 + G A LUAD 159175305 + 159175285 159175325 41 AGCTGGACTTCGAAGATGTATGGAATTCTTCCTATGGTGTG AGCTGGACTTCGAAGATGTATAGAATTCTTCCTATGGTGTG < 41bp 0.531185391471002 0.874496292696677 0.45904467 0.66166323 prediction 0.68662180245135 Functional Gain - ACKR1 ENSG00000213088 CDS Human protein_coding chr1:159175305 chr1:159175306 stopgain 0.015 0 22 hPsi_associated_SNPs_23311 0 0 0 0 1 Endoplasmic reticulum 0.438718592042267 0.438718300204744 0.32332646 0 hPsi_site_17035 iPseU_CNN:0.32332646;iRNA_PseU:0 17036 chrX 150868980 150868980 1 + G A SKCM 150868979 + 150868959 150868999 41 ACCACTTTTTCTTTTGCAGATGGAGTTCTGGAAAGGGTACC ACCACTTTTTCTTTTGCAGATAGAGTTCTGGAAAGGGTACC < 41bp 0.451321712105569 0.843306026974944 0.29609388 0.37381363 prediction 0.686612053949887 Functional Gain - PRRG3 ENSG00000130032 CDS Human protein_coding chrX:150868979 chrX:150868980 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23312 0 0 0 0 1 exosome 0.438718592995457 0.438718592995105 0 0 hPsi_site_17036 iPseU_CNN:0;iRNA_PseU:0 17037 chr10 134010536 134010536 1 + C A UCEC 134010535 + 134010515 134010555 41 CTCTTCCCAGATGTACGAGATCTTCAGCATCATCCGGGACC CTCTTCCCAGATGTACGAGATATTCAGCATCATCCGGGACC < 41bp 0.498988958657666 0.843304675649952 0.58311415 0.874783 prediction 0.686609351299904 Functional Gain - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134010535 chr10:134010536 synonymous SNV . 0 22 hPsi_associated_SNPs_23313 0 0 0 0 2 Endoplasmic reticulum 0.438634395489968 0.438598650857679 0.5833377 0 hPsi_site_17037 iPseU_CNN:0.5833377;iRNA_PseU:0 17038 chr22 39112891 39112891 1 + C A UCEC 39112890 + 39112870 39112910 41 CAGCCTGGAGTGGACCAAGATCTGTGAGAAGTCCACGAAAG CAGCCTGGAGTGGACCAAGATATGTGAGAAGTCCACGAAAG < 41bp 0.490316801364785 0.843301917200726 0.6077986 0.62698716 prediction 0.686603834401451 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39112890 chr22:39112891 synonymous SNV . 0 22 hPsi_associated_SNPs_23314 0 0 1 0 0 Ribosome 0.438706707620049 0.438718823623875 0.03837712 0 hPsi_site_17038 iPseU_CNN:0.03837712;iRNA_PseU:0 17039 chr2 64118329 64118329 1 + G A COAD 64118328 + 64118308 64118348 41 GCAGTATTAGAGAACAAGATTGTGTCTGGAAACCTTCGCAT GCAGTATTAGAGAACAAGATTATGTCTGGAAACCTTCGCAT < 41bp 0.534539931607978 0.877838209339684 0.3044703 0.3224219 prediction 0.686596555463414 Functional Gain - UGP2 ENSG00000169764 CDS Human protein_coding chr2:64118328 chr2:64118329 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23315 0 0 1 0 1 Ribosome 0.438718592915194 0.438718592991266 0 0 hPsi_site_17039 iPseU_CNN:0;iRNA_PseU:0 17040 chr2 27261356 27261356 1 + C A UCEC 27261355 + 27261335 27261375 41 TTGTGCTTTCCCCACAGCCTTCTGCTGGAGCACTTGCTCAG TTGTGCTTTCCCCACAGCCTTATGCTGGAGCACTTGCTCAG < 41bp 0.511973617249859 0.85526856403354 0.48093 0.8302195 prediction 0.686589893567362 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27261355 chr2:27261356 nonsynonymous SNV 0.954 4 22 hPsi_associated_SNPs_23316 0 0 1 0 2 Ribosome 0.438231038477077 0.438416725300139 0.660439 0 hPsi_site_17040 iPseU_CNN:0.660439;iRNA_PseU:0 17041 chr14 76012894 76012894 1 + G A LUAD 76012893 + 76012873 76012913 41 GAAGTACTTCACGTCGGTGCTGAACAGCCACGAGCCCCTGT GAAGTACTTCACGTCGGTGCTAAACAGCCACGAGCCCCTGT < 41bp 0.546481949841552 0.889775955876272 0.32059178 0.8324697 prediction 0.68658801206944 Functional Gain - BATF ENSG00000156127 CDS Human protein_coding chr14:76012893 chr14:76012894 synonymous SNV . 0 22 hPsi_associated_SNPs_23317 0 0 0 0 1 exosome 0.438717950660024 0.438718561067127 0.6649394 0 hPsi_site_17041 iPseU_CNN:0.6649394;iRNA_PseU:0 17042 chr8 28196901 28196901 1 + G A SKCM 28196900 + 28196880 28196920 41 TGAGTTTATGAGGCAATACTTGGTCCTGAGCATGCAGTCCA TGAGTTTATGAGGCAATACTTAGTCCTGAGCATGCAGTCCA < 41bp 0.453801323292326 0.843280941023227 0.19642341 0.3122731 prediction 0.686561882046453 Functional Gain - PNOC ENSG00000168081 CDS Human protein_coding chr8:28196900 chr8:28196901 synonymous SNV . 0 22 hPsi_associated_SNPs_23318 0 0 0 0 0 exosome 0.438718878262838 0.43877469145367 0 0 hPsi_site_17042 iPseU_CNN:0;iRNA_PseU:0 17043 chr3 9952837 9952837 1 + G A LUAD 9952836 + 9952816 9952856 41 TGTTTTGGAGAAGGTGGACCTGCACCCCCAGCTCTGCTTCA TGTTTTGGAGAAGGTGGACCTACACCCCCAGCTCTGCTTCA < 41bp 0.446989916908845 0.843280902565108 0.35062897 0.7390069 prediction 0.686561805130217 Functional Gain - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9952836 chr3:9952837 synonymous SNV . 0 22 hPsi_associated_SNPs_23319 0 0 1 0 2 Ribosome 0.438718592956364 0.438718592990533 0.4780138 0 hPsi_site_17043 iPseU_CNN:0.4780138;iRNA_PseU:0 17044 chr19 43858066 43858066 1 + G A rs45571738 43858065 + 43858045 43858085 41 TGTGTGGAAGGTGTCCGACCTGCCCCGGCAATGGACCCCTA TGTGTGGAAGGTGTCCGACCTACCCCGGCAATGGACCCCTA < 41bp 0.447241071738178 0.843278513233872 0.2970313 0.81303823 prediction 0.686557026467744 Functional Gain - CD177 ENSG00000204936 CDS Human protein_coding chr19:43858065 chr19:43858066 synonymous SNV . 0 22 hPsi_associated_SNPs_23320 0 0 0 0 2 exosome 0.438718592966222 0.438718293074338 0.62607646 0 hPsi_site_17044 iPseU_CNN:0.62607646;iRNA_PseU:0 17045 chr11 10517243 10517243 1 + C A rs141786561 10517242 + 10517222 10517262 41 ATCCAGCACAAGGTCTACTCTCCCAACATGCGCTGGATCAT ATCCAGCACAAGGTCTACTCTACCAACATGCGCTGGATCAT < 41bp 0.510203982928407 0.853465962737146 0.23687205 0.2810564 prediction 0.686523959617478 Functional Gain - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10517242 chr11:10517243 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_23321 0 0 1 0 1 Cytosol 0.438785076303613 0.438650458361716 0 0 hPsi_site_17045 iPseU_CNN:0;iRNA_PseU:0 17046 chr12 117290463 117290463 1 + G A LUAD 117290462 + 117290442 117290482 41 ATCCTGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGG ATCCTGCCTGCAGATGCTGTTAAAGGGGCACAAGAAATTGG < 41bp 0.537874368157498 0.881133397118315 0.30320656 0.4565628 prediction 0.686518057921635 Functional Gain - RNFT2 ENSG00000135119 CDS Human protein_coding chr12:117290462 chr12:117290463 synonymous SNV . 0 22 hPsi_associated_SNPs_23322 0 0 1 2 1 Ribosome 0.43875969577266 0.438682931864782 0 0 hPsi_site_17046 iPseU_CNN:0;iRNA_PseU:0 17047 chr4 15709246 15709246 1 + G A BLCA 15709245 + 15709225 15709265 41 GGGTTGCAGATTTCTTGAGCTGGTGTCGACAGAAAAATGAC GGGTTGCAGATTTCTTGAGCTAGTGTCGACAGAAAAATGAC < 41bp 0.453689271921474 0.843253523533781 0.22903132 0.4208737 prediction 0.686507047067562 Functional Gain - BST1 ENSG00000109743 CDS Human protein_coding chr4:15709245 chr4:15709246 stopgain 0.997 1 22 hPsi_associated_SNPs_23323 0 0 0 0 1 Nucleus 0.438714907341087 0.438886666322364 0 0 hPsi_site_17047 iPseU_CNN:0;iRNA_PseU:0 17048 chr17 4436619 4436619 1 + G A LUAD 4436618 + 4436598 4436638 41 AGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACC AGCCACGCGCTGGTGCCGCCTAAAGACCCAGCGGGCCGACC < 41bp 0.437918906762237 0.843251706740601 0.25146315 0.51041716 prediction 0.686503413481203 Functional Gain - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4436618 chr17:4436619 synonymous SNV . 0 22 hPsi_associated_SNPs_23324 0 0 0 0 1 Ribosome 0.43864572411968 0.438717959153398 0.0208343200000001 0 hPsi_site_17048 iPseU_CNN:0.0208343200000001;iRNA_PseU:0 17049 chr17 45000561 45000561 1 + G A LIHC 45000560 + 45000540 45000580 41 GGCCTGCGGGGCCGGCGACATGGATCCCCTGTTCCAGCAAA GGCCTGCGGGGCCGGCGACATAGATCCCCTGTTCCAGCAAA < 41bp 0.526208831178438 0.869454401534802 0.2261903 0.30221385 prediction 0.686491140712729 Functional Gain - GOSR2 ENSG00000108433;ENSG00000262633 CDS Human other chr17:45000560 chr17:45000561 nonsynonymous SNV 0.526 2 22 hPsi_associated_SNPs_23325 0 0 1 0 1 Ribosome 0.438718609923041 0.438718595498105 0 0 hPsi_site_17049 iPseU_CNN:0;iRNA_PseU:0 17050 chr17 43924109 43924109 1 + G A HNSC 43924108 + 43924088 43924128 41 GACGCCCACTTGGATCCTAATGAGCTGCCCTTCATCCCCCC GACGCCCACTTGGATCCTAATAAGCTGCCCTTCATCCCCCC < 41bp 0.533097480417554 0.876339604142514 0.25460312 0.2996679 prediction 0.68648424744992 Functional Gain - SPPL2C ENSG00000185294 CDS Human protein_coding chr17:43924108 chr17:43924109 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_23326 0 0 0 0 0 unknown 0.438718753010778 0.438718592995103 0 0 hPsi_site_17050 iPseU_CNN:0;iRNA_PseU:0 17051 chr6 123332155 123332155 1 + G A STAD 123332154 + 123332134 123332174 41 ACACTGGTGGATATTTTGCGTGCCATCTTACTTTCTTTAGA ACACTGGTGGATATTTTGCGTACCATCTTACTTTCTTTAGA < 41bp 0.549352952921376 0.892590666190072 0.21638733 0.29855567 prediction 0.686475426537392 Functional Gain - CLVS2 ENSG00000146352 CDS Human protein_coding chr6:123332154 chr6:123332155 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23327 0 0 0 0 1 exosome 0.438863371685444 0.439735000675892 0 0 hPsi_site_17051 iPseU_CNN:0;iRNA_PseU:0 17052 chr3 161221230 161221230 1 + G A SKCM 161221229 + 161221209 161221249 41 GGACCTACTGGGCCGAAGGGTGACATTGGCAACAAAGGGGT GGACCTACTGGGCCGAAGGGTAACATTGGCAACAAAGGGGT < 41bp 0.54807026028131 0.891307420005039 0.27211303 0.6163157 prediction 0.68647431944746 Functional Gain - OTOL1 ENSG00000182447 CDS Human protein_coding chr3:161221229 chr3:161221230 nonsynonymous SNV 0.632 1 22 hPsi_associated_SNPs_23328 0 0 0 0 0 exosome 0.438842020513594 0.438717584516287 0.2326314 0 hPsi_site_17052 iPseU_CNN:0.2326314;iRNA_PseU:0 17053 chr6 138726347 138726347 1 + G A ACC 138726346 + 138726326 138726366 41 CAGCACGTCCGTGGAGTCTATGGACTGGGATTCAGCCATCC CAGCACGTCCGTGGAGTCTATAGACTGGGATTCAGCCATCC < 41bp 0.429132915821777 0.843225313092535 0.2970225 0.4255103 prediction 0.68645062618507 Functional Gain - HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138726346 chr6:138726347 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23329 0 0 1 0 2 Cytosol 0.438718586467938 0.438718640192001 0 0 hPsi_site_17053 iPseU_CNN:0;iRNA_PseU:0 17054 chr10 70679687 70679687 1 + G A PRAD 70679686 + 70679666 70679706 41 GGGAGGGCTATTATTTTCTGTGAGACCAAGAAGAATGTAAC GGGAGGGCTATTATTTTCTGTAAGACCAAGAAGAATGTAAC < 41bp 0.443422039065647 0.843218408187933 0.2616993 0.3334696 prediction 0.686436816375866 Functional Gain - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70679686 chr10:70679687 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_23330 0 0 1 0 2 chromatin 0.438718592996692 0.438718616578678 0 0 hPsi_site_17054 iPseU_CNN:0;iRNA_PseU:0 17055 chr17 46051789 46051789 1 + G A rs560714156 46051788 + 46051768 46051808 41 TTGGCAGGAGATTATAGCTCTGTATGAGAAGGACAACACCT TTGGCAGGAGATTATAGCTCTATATGAGAAGGACAACACCT < 41bp 0.463124950461939 0.843216316310382 0.24633867 0.2754575 prediction 0.686432632620764 Functional Gain - CDK5RAP3 ENSG00000108465 CDS Human protein_coding chr17:46051788 chr17:46051789 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23331 0 0 1 0 2 chromatin 0.438783158966978 0.438659487660773 0 0 hPsi_site_17055 iPseU_CNN:0;iRNA_PseU:0 17056 chr15 101552302 101552302 1 + C A COAD 101552301 + 101552281 101552321 41 TCACCTGAAGGATGTGGATTTCTCAGAAAACGCACTCAAAG TCACCTGAAGGATGTGGATTTATCAGAAAACGCACTCAAAG < 41bp 0.491772476714255 0.843214568997525 0.67742425 0.77397716 prediction 0.68642913799505 Functional Gain - LRRK1 ENSG00000154237 CDS Human protein_coding chr15:101552301 chr15:101552302 nonsynonymous SNV 0.921 1 22 hPsi_associated_SNPs_23332 0 0 0 0 2 Nucleus 0.438540527995109 0.438001616796244 0.19310582 0 hPsi_site_17056 iPseU_CNN:0.19310582;iRNA_PseU:0 17057 chr19 55048275 55048275 1 + C A COAD 55048274 + 55048254 55048294 41 AAGCATTCCAGGCCAACTTTTCTGTGGGCCGTGCAACGCCA AAGCATTCCAGGCCAACTTTTATGTGGGCCGTGCAACGCCA < 41bp 0.507001866191783 0.850213432763914 0.40101627 0.60773104 prediction 0.686423133144261 Functional Gain - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55048274 chr19:55048275 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23333 0 0 0 0 0 Nucleus 0.438714893795508 0.438733153199275 0.21546208 0 hPsi_site_17057 iPseU_CNN:0.21546208;iRNA_PseU:0 17058 chr5 178996388 178996388 1 + G A LGG 178996387 + 178996367 178996407 41 GTGGGACTCAATGTTCTCGATGCCAATCTCTGCTTGAAAGG GTGGGACTCAATGTTCTCGATACCAATCTCTGCTTGAAAGG < 41bp 0.547976162265714 0.891182474659563 0.39611378 0.6393715 prediction 0.686412624787697 Functional Gain - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:178996387 chr5:178996388 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23334 0 0 1 0 2 Ribosome 0.439627993010162 0.43906920422232 0.278743 0 hPsi_site_17058 iPseU_CNN:0.278743;iRNA_PseU:0 17059 chr19 39898684 39898684 1 + G A UCEC 39898683 + 39898663 39898703 41 CGCGCTACAAGACTGAGCTATGTCGGACCTTCTCAGAGAGT CGCGCTACAAGACTGAGCTATATCGGACCTTCTCAGAGAGT < 41bp 0.542821853602115 0.88601671814021 0.37374616 0.67285436 prediction 0.68638972907619 Functional Gain - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898683 chr19:39898684 nonsynonymous SNV 0.916 4 22 hPsi_associated_SNPs_23335 0 0 1 0 0 nucleus 0.438718587980475 0.438718210085807 0.34570872 0 hPsi_site_17059 iPseU_CNN:0.34570872;iRNA_PseU:0 17060 chr9 36211652 36211652 1 + G A BLCA 36211651 + 36211631 36211671 41 GACGAGTCGTCCCCAGGCACTGAGTGGGAACGGGTGGCCCG GACGAGTCGTCCCCAGGCACTAAGTGGGAACGGGTGGCCCG < 41bp 0.444513658745286 0.843190512902811 0.24775523 0.6090871 prediction 0.686381025805622 Functional Gain - CLTA ENSG00000122705 CDS Human protein_coding chr9:36211651 chr9:36211652 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23336 0 0 1 0 2 Ribosome 0.439426969614933 0.438718974565498 0.2181742 0 hPsi_site_17060 iPseU_CNN:0.2181742;iRNA_PseU:0 17061 chr14 77857387 77857387 1 + G A STAD 77857386 + 77857366 77857406 41 ACGCAGGAGCTCCTGGAAATTGAAGAGCCATTATTCAAACG ACGCAGGAGCTCCTGGAAATTAAAGAGCCATTATTCAAACG < 41bp 0.538580614744268 0.881768155603183 0.5703881 0.77517414 prediction 0.686375081717829 Functional Gain - SAMD15 ENSG00000100583 CDS Human protein_coding chr14:77857386 chr14:77857387 nonsynonymous SNV 0.594 1 22 hPsi_associated_SNPs_23337 0 0 0 0 1 exosome 0.438710138968732 0.43871859995744 0.40957208 0 hPsi_site_17061 iPseU_CNN:0.40957208;iRNA_PseU:0 17062 chr6 44197446 44197446 1 + G A UCEC 44197445 + 44197425 44197465 41 CCTGAGCGGAACTCTCTCAGTGCCATCTTCAACAATGTCAT CCTGAGCGGAACTCTCTCAGTACCATCTTCAACAATGTCAT < 41bp 0.438902140297557 0.843175190731965 0.31892478 0.404537 prediction 0.68635038146393 Functional Gain - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197445 chr6:44197446 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_23338 0 0 1 0 0 Endoplasmic reticulum 0.438439323287025 0.440790255159635 0 0 hPsi_site_17062 iPseU_CNN:0;iRNA_PseU:0 17063 chr12 547595 547595 1 + G A CESC 547594 + 547574 547614 41 AAAGAGAAGTCATGGATGCTTGAAAAAGATAATTTGATGTC AAAGAGAAGTCATGGATGCTTAAAAAAGATAATTTGATGTC < 41bp 0.453698228301291 0.843173341907933 0.29171464 0.32186466 prediction 0.686346683815867 Functional Gain - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:547594 chr12:547595 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23339 0 0 1 0 1 cytosol 0.43872928413692 0.438709931123425 0 0 hPsi_site_17063 iPseU_CNN:0;iRNA_PseU:0 17064 chr11 59271540 59271540 1 + G A LUSC 59271539 + 59271519 59271559 41 CGTGCAGATCTCCCTGTTGCTGCCTCTCCCTTTCTGTGGAC CGTGCAGATCTCCCTGTTGCTACCTCTCCCTTTCTGTGGAC < 41bp 0.534937932086442 0.878107215105351 0.24629268 0.4906771 prediction 0.686338566037819 Functional Gain - OR4D11 ENSG00000176200 CDS Human protein_coding chr11:59271539 chr11:59271540 synonymous SNV . 0 22 hPsi_associated_SNPs_23340 0 0 0 0 0 unknown 0.438717760248101 0.438717456607288 0 0 hPsi_site_17064 iPseU_CNN:0;iRNA_PseU:0 17065 chr8 97311987 97311987 1 + C A HNSC 97311986 + 97311966 97312006 41 GGATCAAGTCATTCTGGACATCCTGTTGTGCAATGGCGGTG GGATCAAGTCATTCTGGACATACTGTTGTGCAATGGCGGTG < 41bp 0.481845330423416 0.84316857788076 0.2429195 0.3180169 prediction 0.686337155761521 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97311986 chr8:97311987 synonymous SNV . 0 22 hPsi_associated_SNPs_23341 0 0 1 0 2 Ribosome 0.438821960034977 0.438862012424614 0 0 hPsi_site_17065 iPseU_CNN:0;iRNA_PseU:0 17066 chr1 236702237 236702237 1 + C A LUSC 236702236 + 236702216 236702256 41 CCTCGAGCCGATGTGGCCTTTCATTTCAATCCTCGTTTCAA CCTCGAGCCGATGTGGCCTTTAATTTCAATCCTCGTTTCAA < 41bp 0.506196993339126 0.849365079649045 0.20431244 0.3209554 prediction 0.686336172619838 Functional Gain - LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236702236 chr1:236702237 stopgain 0.955 4 22 hPsi_associated_SNPs_23342 0 0 1 2 1 Cytosol 0.438718592994793 0.438718592995098 0 0 hPsi_site_17066 iPseU_CNN:0;iRNA_PseU:0 17067 chr20 42972041 42972041 1 + G A BLCA 42972040 + 42972020 42972060 41 CCGGTCCGTAGTGGATCTCATGAAGTCCTGGTCTGAGGAGA CCGGTCCGTAGTGGATCTCATAAAGTCCTGGTCTGAGGAGA < 41bp 0.441351464692129 0.843166810167764 0.31402445 0.4312628 prediction 0.686333620335528 Functional Gain - R3HDML ENSG00000101074 CDS Human protein_coding chr20:42972040 chr20:42972041 nonsynonymous SNV 0.149 2 22 hPsi_associated_SNPs_23343 0 0 0 0 1 cytosol 0.438718594787303 0.438718592995334 0 0 hPsi_site_17067 iPseU_CNN:0;iRNA_PseU:0 17068 chr7 143657954 143657954 1 + G A SKCM 143657953 + 143657933 143657973 41 CAGCCTAAGGAATAAAGAGGTGAAGGGGGCCTGGCAGAAAC CAGCCTAAGGAATAAAGAGGTAAAGGGGGCCTGGCAGAAAC < 41bp 0.479438719014568 0.843154066196427 0.2308647 0.34030023 prediction 0.686308132392854 Functional Gain - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657953 chr7:143657954 synonymous SNV . 0 22 hPsi_associated_SNPs_23344 0 0 0 0 0 unknown 0.438718592995101 0.438718592995102 0 0 hPsi_site_17068 iPseU_CNN:0;iRNA_PseU:0 Adolescent idiopathic scoliosis 17069 chr17 34923518 34923518 1 + G A rs562805174 34923517 + 34923497 34923537 41 TACAGAGGTTGTTGGATGGATGTATGGGAACTAATGTCGCA TACAGAGGTTGTTGGATGGATATATGGGAACTAATGTCGCA < 41bp 0.538697975447039 0.88184558930734 0.2524345 0.36178875 prediction 0.686295227720601 Functional Gain - GGNBP2 ENSG00000005955 CDS Human other chr17:34923517 chr17:34923518 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23345 0 0 1 0 2 Nucleus 0.438923277288246 0.438719684062912 0 0 hPsi_site_17069 iPseU_CNN:0;iRNA_PseU:0 17070 chr2 97427829 97427829 1 + G A UCEC 97427828 + 97427808 97427848 41 GAGCTCAATATGATCCAGGGTGCCCTGGAACTACGGACCAA GAGCTCAATATGATCCAGGGTACCCTGGAACTACGGACCAA < 41bp 0.537883003848915 0.88102974799286 0.22373003 0.3281014 prediction 0.686293488287891 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97427828 chr2:97427829 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23346 0 0 1 0 0 chromatin 0.438718598722081 0.438718589210124 0 0 hPsi_site_17070 iPseU_CNN:0;iRNA_PseU:0 17071 chr8 27401706 27401706 1 + C A LGG 27401705 + 27401685 27401725 41 CCTGGGGTTTCCTTTCAGATTCCCCACCTGAAAAGGGGACA CCTGGGGTTTCCTTTCAGATTACCCACCTGAAAAGGGGACA < 41bp 0.506152723498592 0.849293105478571 0.24497467 0.55618846 prediction 0.686280763959958 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27401705 chr8:27401706 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_23347 0 0 1 0 2 Cytosol 0.438718450352286 0.438718523629429 0.11237692 0 hPsi_site_17071 iPseU_CNN:0.11237692;iRNA_PseU:0 17072 chr11 30344703 30344703 1 + G A rs544492901 30344702 + 30344682 30344722 41 TCGGTCGAGTGTGGCCTGTGTGGACTCGCATCTTGCCCGAA TCGGTCGAGTGTGGCCTGTGTAGACTCGCATCTTGCCCGAA < 41bp 0.499072311326646 0.843118921779067 0.7079597 0.86173034 prediction 0.686237843558134 Functional Gain - ARL14EP ENSG00000152219 UTR5 Human protein_coding chr11:30344702 chr11:30344703 . . 0 22 hPsi_associated_SNPs_23348 0 0 1 0 1 chromatin 0.438693688270089 0.438718188821163 0.30754128 0 hPsi_site_17072 iPseU_CNN:0.30754128;iRNA_PseU:0 17073 chr7 49842334 49842334 1 + G A CESC 49842333 + 49842313 49842353 41 CCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTGAGGTGCT CCATGCGAGAGGTGTCGCTGTAAAGCCAACGGTGAGGTGCT < 41bp 0.44012770307851 0.843111277476135 0.2753114 0.66459215 prediction 0.68622255495227 Functional Gain - VWC2 ENSG00000188730 CDS Human protein_coding chr7:49842333 chr7:49842334 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_23349 0 0 0 0 1 exosome 0.438696566773304 0.438717408322876 0.3291843 0 hPsi_site_17073 iPseU_CNN:0.3291843;iRNA_PseU:0 17074 chr14 75747792 75747792 1 + G A UCEC 75747791 + 75747771 75747811 41 GAGCTGAAGACCGAGCCCTTTGATGACTTCCTGTTCCCAGC GAGCTGAAGACCGAGCCCTTTAATGACTTCCTGTTCCCAGC < 41bp 0.542716505971472 0.885823636381334 0.25763357 0.44232437 prediction 0.686214260819724 Functional Gain - FOS ENSG00000170345 CDS Human protein_coding chr14:75747791 chr14:75747792 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_23350 0 0 0 0 0 Endoplasmic reticulum 0.438718567605916 0.43871859907232 0 0 hPsi_site_17074 iPseU_CNN:0;iRNA_PseU:0 17075 chr13 58208123 58208123 1 + G A STAD 58208122 + 58208102 58208142 41 AGGGCTCTACGTGCTTCAGGTGCACGAGAACAACATCCCGG AGGGCTCTACGTGCTTCAGGTACACGAGAACAACATCCCGG < 41bp 0.442647588720408 0.843106093663934 0.24273512 0.8821225 prediction 0.686212187327867 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58208122 chr13:58208123 synonymous SNV . 0 22 hPsi_associated_SNPs_23351 0 0 0 0 0 exosome 0.438664309986505 0.438717925135275 0.764245 0 hPsi_site_17075 iPseU_CNN:0.764245;iRNA_PseU:0 17076 chr2 48809378 48809378 1 + G A STAD 48809377 + 48809357 48809397 41 TCCTTGAAGTCTGTAGTGGTTGTCCAGGGAGCATACGTGGA TCCTTGAAGTCTGTAGTGGTTATCCAGGGAGCATACGTGGA < 41bp 0.452246234331829 0.843089826100312 0.3337427 0.48067582 prediction 0.686179652200625 Functional Gain - STON1;STON1-GTF2A1L ENSG00000068781;ENSG00000243244 CDS Human other chr2:48809377 chr2:48809378 nonsynonymous SNV 0.634 1 22 hPsi_associated_SNPs_23352 0 0 1 0 0 unknown 0.438664864678051 0.438728711693751 0 0 hPsi_site_17076 iPseU_CNN:0;iRNA_PseU:0 17077 chr17 56770110 56770110 1 + G A CESC 56770109 + 56770089 56770129 41 TCTGCGGGGTTCCAGACTGCTGAGGAACTCCTAGAGGTGAA TCTGCGGGGTTCCAGACTGCTAAGGAACTCCTAGAGGTGAA < 41bp 0.445197472212297 0.84308744218158 0.30636343 0.3724485 prediction 0.686174884363159 Functional Gain - RAD51C ENSG00000108384 CDS Human protein_coding chr17:56770109 chr17:56770110 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_23353 2 0 1 0 1 Cytosol 0.438718555574642 0.438716903708387 0 0 hPsi_site_17077 iPseU_CNN:0;iRNA_PseU:0 17078 chr3 69153637 69153637 1 + G A BLCA 69153636 + 69153616 69153656 41 GATGTTTATCCATGCATCGTTGAGACTTCGGAACCTCAAGA GATGTTTATCCATGCATCGTTAAGACTTCGGAACCTCAAGA < 41bp 0.476902981870643 0.8430867792638 0.3170149 0.46430123 prediction 0.6861735585276 Functional Gain - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69153636 chr3:69153637 synonymous SNV . 0 22 hPsi_associated_SNPs_23354 0 0 1 0 1 Endoplasmic reticulum 0.440595475529753 0.438645009818701 0 0 hPsi_site_17078 iPseU_CNN:0;iRNA_PseU:0 17079 chr22 39064131 39064131 1 + G A OV 39064130 + 39064110 39064150 41 GTCGGCATCTCTCTCCAACCTGCATTCTGTGAGTGTCGGTA GTCGGCATCTCTCTCCAACCTACATTCTGTGAGTGTCGGTA < 41bp 0.443138722969434 0.843086440441936 0.21175995 0.27315056 prediction 0.686172880883872 Functional Gain - CBY1 ENSG00000100211 CDS Human protein_coding chr22:39064130 chr22:39064131 synonymous SNV . 0 22 hPsi_associated_SNPs_23355 0 0 1 0 1 Ribosome 0.438702307407542 0.438683481099669 0 0 hPsi_site_17079 iPseU_CNN:0;iRNA_PseU:0 17080 chr6 43406410 43406410 1 + G A OV 43406409 + 43406389 43406429 41 GCTGTCCAAGGGCTTTGGCCTGGCCACCCAGGAACCCTGGA GCTGTCCAAGGGCTTTGGCCTAGCCACCCAGGAACCCTGGA < 41bp 0.426432076912237 0.843085595620855 0.19336858 0.2622059 prediction 0.686171191241711 Functional Gain - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43406409 chr6:43406410 synonymous SNV . 0 22 hPsi_associated_SNPs_23356 0 0 1 0 1 chromatin 0.43869784110452 0.438718592994375 0 0 hPsi_site_17080 iPseU_CNN:0;iRNA_PseU:0 17081 chr15 74174038 74174038 1 + C A UCS 74174037 + 74174017 74174057 41 GAAATTCCTCACGGGCTACTTCTCATGGCAGAGTTCCCAGG GAAATTCCTCACGGGCTACTTATCATGGCAGAGTTCCCAGG < 41bp 0.514359106123133 0.857442832945213 0.25122094 0.2748024 prediction 0.686167453644158 Functional Gain - TBC1D21 ENSG00000167139 CDS Human protein_coding chr15:74174037 chr15:74174038 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23357 0 0 0 0 1 exosome 0.438718585843916 0.438718593140261 0 0 hPsi_site_17081 iPseU_CNN:0;iRNA_PseU:0 Emotional lability in attention deficit hyperactivity disorder 17082 chr11 400353 400353 1 + C A CESC 400352 + 400332 400372 41 AGGAACCTCAGCTCAGCCTCTCAGGCCACTCGCCAGAAGAT AGGAACCTCAGCTCAGCCTCTAAGGCCACTCGCCAGAAGAT < 41bp 0.503391881383854 0.846472987184814 0.26188412 0.6311694 prediction 0.686162211601921 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:400352 chr11:400353 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_23358 0 0 1 0 2 Ribosome 0.437791265956654 0.438717261934003 0.2623388 0 hPsi_site_17082 iPseU_CNN:0.2623388;iRNA_PseU:0 17083 chr11 60699470 60699470 1 + G A LUAD 60699469 + 60699449 60699489 41 CCCCCAGGCTGAGGAGCTGGTGAATACAGCACCACTGACTG CCCCCAGGCTGAGGAGCTGGTAAATACAGCACCACTGACTG < 41bp 0.542236796401895 0.885315714405467 0.20626622 0.59365565 prediction 0.686157836007144 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60699469 chr11:60699470 synonymous SNV . 0 22 hPsi_associated_SNPs_23359 0 0 1 0 1 Ribosome 0.438718592584884 0.438718592952216 0.1873113 0 hPsi_site_17083 iPseU_CNN:0.1873113;iRNA_PseU:0 17084 chr1 220928421 220928421 1 + G A BLCA 220928420 + 220928400 220928440 41 AGACATGGACCAGCTGGTTTTGCCTAGCAAGCAGCCTTCCT AGACATGGACCAGCTGGTTTTACCTAGCAAGCAGCCTTCCT < 41bp 0.550153836694653 0.893222383245845 0.27945596 0.81367636 prediction 0.686137093102384 Functional Gain - MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928420 chr1:220928421 synonymous SNV . 0 22 hPsi_associated_SNPs_23360 0 0 1 0 1 nucleus 0.438405375836451 0.438289425766681 0.62735272 0 hPsi_site_17084 iPseU_CNN:0.62735272;iRNA_PseU:0 17085 chr22 38202088 38202088 1 + G A HNSC 38202087 + 38202067 38202107 41 GCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCA GCCCAAAAAGGCCAAACCAGTAAAACCCAAAGCAAAGTCCA < 41bp 0.463294827475493 0.843067763573958 0.503975 0.7495029 prediction 0.686135527147916 Functional Gain - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38202087 chr22:38202088 synonymous SNV . 0 22 hPsi_associated_SNPs_23361 0 0 1 0 0 Ribosome 0.438718394715455 0.438718550783304 0.4910558 0 hPsi_site_17085 iPseU_CNN:0.4910558;iRNA_PseU:0 17086 chr16 29998689 29998689 1 + G A CESC 29998688 + 29998668 29998708 41 ACTGGGGGCCGTCCTGGGCCTGAGCTGGCGCCGAGGCCTCA ACTGGGGGCCGTCCTGGGCCTAAGCTGGCGCCGAGGCCTCA < 41bp 0.452993760026222 0.843064564323195 0.2572363 0.622148 prediction 0.68612912864639 Functional Gain - TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29998688 chr16:29998689 synonymous SNV . 0 22 hPsi_associated_SNPs_23362 0 0 1 0 0 Nucleus 0.438718592996485 0.438718592992531 0.244296 0 hPsi_site_17086 iPseU_CNN:0.244296;iRNA_PseU:0 17087 chr20 33297148 33297148 1 + G A LUSC 33297147 + 33297127 33297167 41 GGTTTGTTACCCCTCCCGCCTGTTTTACGGCAGAGGGGCCT GGTTTGTTACCCCTCCCGCCTATTTTACGGCAGAGGGGCCT < 41bp 0.439464203758452 0.843063260123743 0.30257803 0.45165992 prediction 0.686126520247485 Functional Gain - TP53INP2 ENSG00000078804 CDS Human protein_coding chr20:33297147 chr20:33297148 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23363 0 0 1 0 0 nucleolus 0.438718592995137 0.438718592995099 0 0 hPsi_site_17087 iPseU_CNN:0;iRNA_PseU:0 17088 chr16 24920333 24920333 1 + C A CESC 24920332 + 24920312 24920352 41 GGTGAAGAGCATTCACTACCTCTACTTCTCCATGATCCTGT GGTGAAGAGCATTCACTACCTATACTTCTCCATGATCCTGT < 41bp 0.509733556450934 0.852793052609965 0.25736174 0.50285065 prediction 0.686118992318062 Functional Gain - SLC5A11 ENSG00000158865 CDS Human protein_coding chr16:24920332 chr16:24920333 synonymous SNV . 0 22 hPsi_associated_SNPs_23364 0 0 0 0 1 exosome 0.438709379387891 0.438720398377902 0.00570129999999991 0 hPsi_site_17088 iPseU_CNN:0.00570129999999991;iRNA_PseU:0 17089 chrX 48341391 48341391 1 + G A CESC 48341390 + 48341370 48341410 41 GTAGATGGAAGACAATGAAATGAGTTGTTCACCTTAACCCA GTAGATGGAAGACAATGAAATAAGTTGTTCACCTTAACCCA < 41bp 0.451569794380302 0.8430568355185 0.28882852 0.32452065 prediction 0.686113671036999 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48341390 chrX:48341391 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_23365 0 0 1 0 2 Ribosome 0.438718592622094 0.438707168786694 0 0 hPsi_site_17089 iPseU_CNN:0;iRNA_PseU:0 17090 chr11 1862066 1862066 1 + G A HNSC 1862065 + 1862045 1862085 41 CTAGGAGCTCTGCAAACAGCTGCACGCCAAGATCGATGCGG CTAGGAGCTCTGCAAACAGCTACACGCCAAGATCGATGCGG < 41bp 0.442778538208626 0.843055019174062 0.72837037 0.9727435 prediction 0.686110038348124 Functional Gain - TNNI2 ENSG00000130598 CDS Human protein_coding chr11:1862065 chr11:1862066 synonymous SNV . 0 22 hPsi_associated_SNPs_23366 0 0 0 0 2 exosome 0.439818621630729 0.448413155481305 0.48874626 0 hPsi_site_17090 iPseU_CNN:0.48874626;iRNA_PseU:0 17091 chr2 219747124 219747124 1 + G A BLCA 219747123 + 219747103 219747143 41 ACTCGCAACAAGATCCCCTATGAGAGTCCCATCTTCAGCAG ACTCGCAACAAGATCCCCTATAAGAGTCCCATCTTCAGCAG < 41bp 0.446722318508151 0.843053014651913 0.23853105 0.32043606 prediction 0.686106029303826 Functional Gain - WNT10A ENSG00000135925 CDS Human protein_coding chr2:219747123 chr2:219747124 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_23367 0 0 0 0 1 exosome 0.438718579372716 0.43871832660314 0 0 hPsi_site_17091 iPseU_CNN:0;iRNA_PseU:0 17092 chr1 28285118 28285118 1 + G A SKCM 28285117 + 28285097 28285137 41 CCACTCCATGCACACAGTGCTGGACCGCATCGCTGGCGACC CCACTCCATGCACACAGTGCTAGACCGCATCGCTGGCGACC < 41bp 0.431355738477473 0.843050668893596 0.30030954 0.7724842 prediction 0.686101337787193 Functional Gain - SMPDL3B ENSG00000130768 CDS Human protein_coding chr1:28285117 chr1:28285118 synonymous SNV . 0 22 hPsi_associated_SNPs_23368 0 0 0 0 0 chromatin 0.438689052616085 0.402565883915277 0.5449684 0 hPsi_site_17092 iPseU_CNN:0.5449684;iRNA_PseU:0 17093 chr8 99170350 99170350 1 + G A BLCA 99170349 + 99170329 99170369 41 CAGGGAGATTTTTCCATGGCTGTTGGCTGTGGAGAAGCCCT CAGGGAGATTTTTCCATGGCTATTGGCTGTGGAGAAGCCCT < 41bp 0.45532676659429 0.843043986662038 0.25213617 0.30041814 prediction 0.686087973324075 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99170349 chr8:99170350 nonsynonymous SNV 0.928 1 22 hPsi_associated_SNPs_23369 0 0 1 0 0 Mitochondrion 0.399116231752567 0.429809715540152 0 0 hPsi_site_17093 iPseU_CNN:0;iRNA_PseU:0 17094 chr9 131671435 131671435 1 + G A BLCA 131671434 + 131671414 131671454 41 GATCGGCAACCTCACCAACCTGGAGCGCCTCTACCTGAACC GATCGGCAACCTCACCAACCTAGAGCGCCTCTACCTGAACC < 41bp 0.452446117915902 0.843041813180115 0.13788942 0.24458677 prediction 0.68608362636023 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671434 chr9:131671435 synonymous SNV . 0 22 hPsi_associated_SNPs_23370 0 0 1 0 0 Endoplasmic reticulum 0.438718592995101 0.438718592992683 0 0 hPsi_site_17094 iPseU_CNN:0;iRNA_PseU:0 17095 chr11 1857139 1857139 1 + G A COAD 1857138 + 1857118 1857158 41 GCAACCTGATGTGGATGGCCTGGAGTCCAGCCCGGGGGATG GCAACCTGATGTGGATGGCCTAGAGTCCAGCCCGGGGGATG < 41bp 0.450530580003388 0.84302917714628 0.30092502 0.62189484 prediction 0.68605835429256 Functional Gain - SYT8 ENSG00000149043 CDS Human protein_coding chr11:1857138 chr11:1857139 stopgain . 0 22 hPsi_associated_SNPs_23371 0 0 0 0 2 exosome 0.43871857169011 0.438691046121052 0.24378968 0 hPsi_site_17095 iPseU_CNN:0.24378968;iRNA_PseU:0 17096 chr22 41914522 41914522 1 + G A KIRC 41914521 + 41914501 41914541 41 TGATGAATTCAAGGATCACTTGGTGCCTGACCCTGGCTGCC TGATGAATTCAAGGATCACTTAGTGCCTGACCCTGGCTGCC < 41bp 0.443738373232177 0.843028479491097 0.24257913 0.42693946 prediction 0.686056958982195 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41914521 chr22:41914522 synonymous SNV . 0 22 hPsi_associated_SNPs_23372 0 0 1 0 2 chromatin 0.438718609252378 0.438594384562541 0 0 hPsi_site_17096 iPseU_CNN:0;iRNA_PseU:0 17097 chr11 71249529 71249529 1 + G A rs200162819 71249528 + 71249508 71249548 41 CCAGCTGCTGCAAGCCCTGCTGTTCCCAGTCCAGCTGCTGT CCAGCTGCTGCAAGCCCTGCTATTCCCAGTCCAGCTGCTGT < 41bp 0.457657751737344 0.843027714863308 0.22770473 0.6288874 prediction 0.686055429726616 Functional Gain - KRTAP5-8 ENSG00000241233 CDS Human protein_coding chr11:71249528 chr11:71249529 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_23373 0 0 0 0 0 unknown 0.438718098654256 0.438718587553932 0.2577748 0 hPsi_site_17097 iPseU_CNN:0.2577748;iRNA_PseU:0 17098 chr19 49442881 49442881 1 + G A STAD 49442880 + 49442860 49442900 41 TGCTGGACATCGGCATCTACTGTGTCCAGTTCACCTCCATG TGCTGGACATCGGCATCTACTATGTCCAGTTCACCTCCATG < 41bp 0.550012482119392 0.893037907567654 0.48985744 0.64991236 prediction 0.686050850896524 Functional Gain - DHDH ENSG00000104808 CDS Human protein_coding chr19:49442880 chr19:49442881 nonsynonymous SNV 0.560 4 22 hPsi_associated_SNPs_23374 0 0 0 0 1 cytosol 0.438717130843689 0.438718813529659 0.29982472 0 hPsi_site_17098 iPseU_CNN:0.29982472;iRNA_PseU:0 17099 chr1 192335145 192335145 1 + G A COAD 192335144 + 192335124 192335164 41 AGGCTCAGAAATTAATCTATTGTCTCATGGCCAAGGATTCT AGGCTCAGAAATTAATCTATTATCTCATGGCCAAGGATTCT < 41bp 0.468860441885326 0.843024173463304 0.34199744 0.54182965 prediction 0.686048346926608 Functional Gain - RGS21 ENSG00000253148 CDS Human protein_coding chr1:192335144 chr1:192335145 nonsynonymous SNV 0.766 0 22 hPsi_associated_SNPs_23375 0 0 0 0 1 unknown 0.438719122248466 0.438718601258114 0.0836593000000001 0 hPsi_site_17099 iPseU_CNN:0.0836593000000001;iRNA_PseU:0 17100 chr17 21094326 21094326 1 + G A UCEC 21094325 + 21094305 21094345 41 GCCCAGGATGTTCTTGCTGCTGTGGGGAAGAAGAAGAAAGA GCCCAGGATGTTCTTGCTGCTATGGGGAAGAAGAAGAAAGA < 41bp 0.451359326127456 0.843021840799889 0.28519022 0.499026 prediction 0.686043681599779 Functional Gain - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21094325 chr17:21094326 nonsynonymous SNV 0.981 3 22 hPsi_associated_SNPs_23376 0 0 1 0 1 Endoplasmic reticulum 0.438718893318437 0.438718601578997 0 0 hPsi_site_17100 iPseU_CNN:0;iRNA_PseU:0 17101 chr3 9974794 9974794 1 + G A rs144732629 9974793 + 9974773 9974813 41 ACTGAGCGCGCAGGGGCCCGTGGCTTGGTTTCACGCGCAGC ACTGAGCGCGCAGGGGCCCGTAGCTTGGTTTCACGCGCAGC < 41bp 0.467427900367307 0.843020301387687 0.33111092 0.858855 prediction 0.686040602775375 Functional Gain - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9974793 chr3:9974794 synonymous SNV . 0 22 hPsi_associated_SNPs_23377 0 0 0 0 0 Ribosome 0.438639945197585 0.43871579612302 0.71771 0 hPsi_site_17101 iPseU_CNN:0.71771;iRNA_PseU:0 17102 chr7 97363062 97363062 1 + C A GBM 97363061 + 97363041 97363081 41 CTGCCGGAGCCCTTTGAGCATCTTCTGCAGAGAATCGCCCG CTGCCGGAGCCCTTTGAGCATATTCTGCAGAGAATCGCCCG < 41bp 0.507886025323206 0.850899969474414 0.33636004 0.51345104 prediction 0.686027888302415 Functional Gain - TAC1 ENSG00000006128 CDS Human protein_coding chr7:97363061 chr7:97363062 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_23378 0 0 0 0 2 exosome 0.438709290520388 0.445172309451236 0.0269020799999999 0 hPsi_site_17102 iPseU_CNN:0.0269020799999999;iRNA_PseU:0 17103 chr7 65617257 65617257 1 + C A ESCA 65617256 + 65617236 65617276 41 TGAAGCTCTTCTCCACACCGTCACCAGCATTCTGCCTGCAG TGAAGCTCTTCTCCACACCGTAACCAGCATTCTGCCTGCAG < 41bp 0.493797331616977 0.843009876243325 0.30359524 0.51058626 prediction 0.68601975248665 Functional Gain - CRCP ENSG00000241258 CDS Human protein_coding chr7:65617256 chr7:65617257 synonymous SNV . 0 22 hPsi_associated_SNPs_23379 0 0 1 1 1 Ribosome 0.438704183212404 0.438710841093847 0.0211725199999999 0 hPsi_site_17103 iPseU_CNN:0.0211725199999999;iRNA_PseU:0 17104 chr19 7963729 7963729 1 + G A SKCM 7963728 + 7963708 7963748 41 TTTATTAACCAGCTGTGTTATGAGACGGCCCTGCACTGGTA TTTATTAACCAGCTGTGTTATAAGACGGCCCTGCACTGGTA < 41bp 0.45266753019068 0.843009849665667 0.2697075 0.3423788 prediction 0.686019699331334 Functional Gain - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7963728 chr19:7963729 nonsynonymous SNV 0.459 4 22 hPsi_associated_SNPs_23380 0 0 0 0 0 chromatin 0.438718592445253 0.438718595252676 0 0 hPsi_site_17104 iPseU_CNN:0;iRNA_PseU:0 17105 chr9 139616461 139616461 1 + C A LUSC 139616460 + 139616440 139616480 41 TGGAGTGGAGGACCTGCCTCTCGGTGGCCCCGGGCCAGCAG TGGAGTGGAGGACCTGCCTCTAGGTGGCCCCGGGCCAGCAG < 41bp 0.495190776069289 0.8429936526874 0.24246532 0.51389426 prediction 0.685987305374799 Functional Gain - FAM69B ENSG00000165716 CDS Human protein_coding chr9:139616460 chr9:139616461 stopgain 0.027 0 22 hPsi_associated_SNPs_23381 0 0 1 0 2 chromatin 0.438711806684289 0.438718587616955 0.0277885200000001 0 hPsi_site_17105 iPseU_CNN:0.0277885200000001;iRNA_PseU:0 17106 chr17 7386280 7386280 1 + G A rs7214088 7386279 + 7386259 7386299 41 GCATTGCCATCATCACAGCCTGGAACCTCAGCTGTGAGAGG GCATTGCCATCATCACAGCCTAGAACCTCAGCTGTGAGAGG < 41bp 0.533852301227024 0.876844803330187 0.24244088 0.4094208 prediction 0.685985004206328 Functional Gain - SLC35G6 ENSG00000259224 CDS Human protein_coding chr17:7386279 chr17:7386280 stopgain 0.933 0 22 hPsi_associated_SNPs_23382 0 0 0 0 0 exosome 0.438718592866305 0.438721984796528 0 0 hPsi_site_17106 iPseU_CNN:0;iRNA_PseU:0 17107 chr13 88327712 88327712 1 + G A STAD 88327711 + 88327691 88327731 41 AAAAATGCATAGCTGGATGCTGCAGACTCTAGCGTTTGCTG AAAAATGCATAGCTGGATGCTACAGACTCTAGCGTTTGCTG < 41bp 0.466087338621093 0.84298478501242 0.30231556 0.5231347 prediction 0.68596957002484 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327711 chr13:88327712 synonymous SNV . 0 22 hPsi_associated_SNPs_23383 0 0 1 0 1 nucleus 0.438682166254151 0.438715171567132 0.0462693999999999 0 hPsi_site_17107 iPseU_CNN:0.0462693999999999;iRNA_PseU:0 17108 chr9 107550724 107550724 1 + C A UCEC 107550723 + 107550703 107550743 41 GTACCTTGCCAACTTCTTTCTCTGGGACTCCTCTCAAAAGG GTACCTTGCCAACTTCTTTCTATGGGACTCCTCTCAAAAGG < 41bp 0.51126359658942 0.85424820721059 0.6479014 0.7250298 prediction 0.68596922124234 Functional Gain - ABCA1 ENSG00000165029 CDS Human protein_coding chr9:107550723 chr9:107550724 stopgain 1.000 1 22 hPsi_associated_SNPs_23384 0 0 0 0 0 cytosol 0.438718593027198 0.438718595595448 0.1542568 0 hPsi_site_17108 iPseU_CNN:0.1542568;iRNA_PseU:0 17109 chr9 134394274 134394274 1 + C A rs139687326 134394273 + 134394253 134394293 41 GTATCGGCAACTGGAGATCGTCGGGGAGAAGCTGTCCCGGG GTATCGGCAACTGGAGATCGTAGGGGAGAAGCTGTCCCGGG < 41bp 0.516232868075016 0.859215595017649 0.46958128 0.64563966 prediction 0.685965453885268 Functional Gain - POMT1 ENSG00000130714 CDS Human protein_coding chr9:134394273 chr9:134394274 synonymous SNV . 0 22 hPsi_associated_SNPs_23385 0 0 1 0 2 Endoplasmic reticulum 0.438766628624279 0.438717401884476 0.29127932 0 hPsi_site_17109 iPseU_CNN:0.29127932;iRNA_PseU:0 17110 chr21 47970550 47970550 1 + C A UCEC 47970549 + 47970529 47970569 41 CTCTCGGAGGGATTCACATTTCTGAAACCAAACAGCGCTTT CTCTCGGAGGGATTCACATTTATGAAACCAAACAGCGCTTT < 41bp 0.490554927117755 0.842980768508459 0.45992464 0.64910066 prediction 0.685961537016917 Functional Gain - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47970549 chr21:47970550 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23386 0 0 1 0 1 Cytosol 0.438716781678644 0.438747505968454 0.29820132 0 hPsi_site_17110 iPseU_CNN:0.29820132;iRNA_PseU:0 17111 chr7 77569392 77569392 1 + G A UCEC 77569391 + 77569371 77569411 41 GGATACCAGATTTTTGGAAATGCAGTCTCTCTCATACTGGG GGATACCAGATTTTTGGAAATACAGTCTCTCTCATACTGGG < 41bp 0.463977088918749 0.842978163509747 0.29587469 0.31899613 prediction 0.685956327019494 Functional Gain - PHTF2 ENSG00000006576 CDS Human protein_coding chr7:77569391 chr7:77569392 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_23387 0 0 1 0 1 Ribosome 0.438721469944315 0.438767595912453 0 0 hPsi_site_17111 iPseU_CNN:0;iRNA_PseU:0 17112 chr7 143027929 143027929 1 + C A READ 143027928 + 143027908 143027948 41 TCGGAACTACTGGAGAGGATTCTTTGCAGCCACGTTCAGCG TCGGAACTACTGGAGAGGATTATTTGCAGCCACGTTCAGCG < 41bp 0.510696549108222 0.853670595586065 0.8301833 0.76169723 prediction 0.685948092955685 Functional Gain - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143027928 chr7:143027929 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23388 0 0 0 1 1 exosome 0.43871859300535 0.438718813288833 0 0 hPsi_site_17112 iPseU_CNN:0;iRNA_PseU:0 17113 chr11 118851238 118851238 1 + G A COAD 118851237 + 118851217 118851257 41 TCCGGACGGCCCCGGAAGGCTGGAAGAATACTGTCCGTCAC TCCGGACGGCCCCGGAAGGCTAGAAGAATACTGTCCGTCAC < 41bp 0.549882522067205 0.892856107203148 0.2250143 0.4968012 prediction 0.685947170271885 Functional Gain - FOXR1 ENSG00000176302 CDS Human protein_coding chr11:118851237 chr11:118851238 stopgain 0.999 1 22 hPsi_associated_SNPs_23389 0 0 0 0 1 unknown 0.438718629922631 0.438718401161756 0 0 hPsi_site_17113 iPseU_CNN:0;iRNA_PseU:0 17114 chr4 144435238 144435238 1 + C T rs200653868 144435239 - 144435219 144435259 41 CTCACCTCCATCTCGGCGTCTGCGGGACCAGCGCTGGCCGC CTCACCTCCATCTCGGCGTCTACGGGACCAGCGCTGGCCGC < 41bp 0.514977119315815 0.857950499558853 0.28377667 0.4922591 prediction 0.685946760486076 Functional Gain - SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144435239 chr4:144435238 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_23390 0 0 1 0 0 Nucleus 0.438718931603933 0.438323062123459 0 0 hPsi_site_17114 iPseU_CNN:0;iRNA_PseU:0 17115 chr13 28197305 28197305 1 + G A BLCA 28197304 + 28197284 28197324 41 TGAATGAGCTCATGAATGTCTGCCAACATGTGCTTGACAAG TGAATGAGCTCATGAATGTCTACCAACATGTGCTTGACAAG < 41bp 0.465570129656372 0.842967275925749 0.23951209 0.3088084 prediction 0.685934551851497 Functional Gain - POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197304 chr13:28197305 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23391 0 0 1 0 0 Ribosome 0.44412867653342 0.439833032208053 0 0 hPsi_site_17115 iPseU_CNN:0;iRNA_PseU:0 17116 chr20 58519380 58519380 1 + G A CESC 58519379 + 58519359 58519399 41 GAAATTGATCCAGTTTACTTTGATCTTCACCCTGGTCAGGG GAAATTGATCCAGTTTACTTTAATCTTCACCCTGGTCAGGG < 41bp 0.45320366720167 0.842954298582342 0.2894487 0.6292958 prediction 0.685908597164685 Functional Gain - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519379 chr20:58519380 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_23392 0 0 1 0 0 Cytosol 0.438718604904631 0.438718592948547 0.2585916 0 hPsi_site_17116 iPseU_CNN:0.2585916;iRNA_PseU:0 17117 chr4 122687283 122687283 1 + G A rs148730634 122687282 + 122687262 122687302 41 CAGCCAGGTCTGCCTTCAGCTGAATGCTTGTGTAGAGGTGG CAGCCAGGTCTGCCTTCAGCTAAATGCTTGTGTAGAGGTGG < 41bp 0.499559710619759 0.842949297136802 0.21185783 0.59887946 prediction 0.685898594273603 Functional Gain - PP12613 ENSG00000226757 CDS Human antisense chr4:122687282 chr4:122687283 synonymous SNV . 0 22 hPsi_associated_SNPs_23393 0 0 0 0 0 unknown 0.438675364228303 0.438659023884575 0.19775892 0 hPsi_site_17117 iPseU_CNN:0.19775892;iRNA_PseU:0 17118 chr10 102738662 102738662 1 + G T BLCA 102738663 - 102738643 102738683 41 AGTAGTACACCTTGTCATCATCACCCACTGCACTGGCCTTG AGTAGTACACCTTGTCATCATAACCCACTGCACTGGCCTTG < 41bp 0.51161597158106 0.854564885821108 0.17506269 0.29781157 prediction 0.685897828480096 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738663 chr10:102738662 nonsynonymous SNV 0.954 4 22 hPsi_associated_SNPs_23394 0 0 0 3 0 nucleoplasm 0.438712361096529 0.438674428716851 0 0 hPsi_site_17118 iPseU_CNN:0;iRNA_PseU:0 17119 chr3 58486760 58486760 1 + G A SKCM 58486759 + 58486739 58486779 41 CGTTACCCGGATTCCATGCTTGGAGCTATGTTTGGGGGGGA CGTTACCCGGATTCCATGCTTAGAGCTATGTTTGGGGGGGA < 41bp 0.536112357776667 0.879058702532483 0.30539358 0.5132012 prediction 0.685892689511631 Functional Gain - KCTD6 ENSG00000168301 CDS Human protein_coding chr3:58486759 chr3:58486760 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23395 0 0 1 0 1 exosome 0.438718674747874 0.438718571560139 0.0264024 0 hPsi_site_17119 iPseU_CNN:0.0264024;iRNA_PseU:0 17120 chr22 44514968 44514968 1 + G A BLCA 44514967 + 44514947 44514987 41 GGTGGAGGAGAGGATCATTGTGAAGCAGCTGGAGGAAGACC GGTGGAGGAGAGGATCATTGTAAAGCAGCTGGAGGAAGACC < 41bp 0.426635436743592 0.842942187979966 0.26974273 0.4504887 prediction 0.685884375959932 Functional Gain - PARVB ENSG00000188677 CDS Human protein_coding chr22:44514967 chr22:44514968 synonymous SNV . 0 22 hPsi_associated_SNPs_23396 0 0 1 0 2 Ribosome 0.438681114129567 0.438718540398304 0 0 hPsi_site_17120 iPseU_CNN:0;iRNA_PseU:0 17121 chr22 38352817 38352817 1 + G A BLCA 38352816 + 38352796 38352836 41 TTTGATGATGTGGAGGAGGATGAAGGGCTAGATGACTTGGA TTTGATGATGTGGAGGAGGATAAAGGGCTAGATGACTTGGA < 41bp 0.547632261436631 0.890573505367795 0.32743853 0.6433796 prediction 0.685882487862329 Functional Gain - POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352816 chr22:38352817 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23397 0 0 1 0 3 Ribosome 0.438718593039009 0.438718492918641 0.2867592 0 hPsi_site_17121 iPseU_CNN:0.2867592;iRNA_PseU:0 17122 chr15 59387120 59387120 1 + G A rs530876743 59387119 + 59387099 59387139 41 ACACCATGTTTCAGAACTCTTGCCCTCCCTCTCATTCCCAT ACACCATGTTTCAGAACTCTTACCCTCCCTCTCATTCCCAT < 41bp 0.525860291969393 0.868799446506687 0.22584763 0.6998176 prediction 0.685878309074587 Functional Gain - RNF111 ENSG00000157450 UTR3 Human protein_coding chr15:59387119 chr15:59387120 . . 0 22 hPsi_associated_SNPs_23398 0 0 1 1 0 Ribosome 0.43871858464821 0.438717801685816 0.3996352 0 hPsi_site_17122 iPseU_CNN:0.3996352;iRNA_PseU:0 17123 chr6 150240374 150240374 1 + G A rs533365156 150240373 + 150240353 150240393 41 AGTCAAAGAGGAGGAAGATCTGTCCATCGAAACTGAGCTGC AGTCAAAGAGGAGGAAGATCTATCCATCGAAACTGAGCTGC < 41bp 0.531806330216951 0.874745370041731 0.40494806 0.70701206 prediction 0.68587807964956 Functional Gain - RAET1G ENSG00000203722 CDS Human protein_coding chr6:150240373 chr6:150240374 stopgain 0.042 0 22 hPsi_associated_SNPs_23399 0 0 0 0 1 exosome 0.43871858010525 0.438718584115798 0.41402412 0 hPsi_site_17123 iPseU_CNN:0.41402412;iRNA_PseU:0 17124 chr17 40666399 40666399 1 + G A ACC 40666398 + 40666378 40666418 41 GTGCTGTTCTTCTTCTTCACTGCCTTTGCCACCCTGACCGT GTGCTGTTCTTCTTCTTCACTACCTTTGCCACCCTGACCGT < 41bp 0.443015917751543 0.842935368097602 0.33857116 0.5144177 prediction 0.685870736195204 Functional Gain - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40666398 chr17:40666399 nonsynonymous SNV 0.922 2 22 hPsi_associated_SNPs_23400 0 0 1 0 2 Endoplasmic reticulum 0.43871833576537 0.438715516437955 0.0288354 0 hPsi_site_17124 iPseU_CNN:0.0288354;iRNA_PseU:0 17125 chr18 72187480 72187480 1 + G A rs532151787 72187479 + 72187459 72187499 41 CCACGGGTGGAGCTACCCGTTGGGCTTATGAGTGACCTGGA CCACGGGTGGAGCTACCCGTTAGGCTTATGAGTGACCTGGA < 41bp 0.452910516968278 0.842932569071429 0.21373588 0.65213513 prediction 0.685865138142858 Functional Gain - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72187479 chr18:72187480 stopgain 0.000 0 22 hPsi_associated_SNPs_23401 0 0 1 0 0 Ribosome 0.438536907331978 0.438717054503539 0.30427026 0 hPsi_site_17125 iPseU_CNN:0.30427026;iRNA_PseU:0 17126 chr5 140559792 140559792 1 + G A COAD 140559791 + 140559771 140559811 41 GGGCGGCCTCGGTGGGTCGCTGCTCAGTGCCTGAGGGCCCC GGGCGGCCTCGGTGGGTCGCTACTCAGTGCCTGAGGGCCCC < 41bp 0.52582429806048 0.868755554649293 0.23872963 0.5209604 prediction 0.685862513177627 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140559791 chr5:140559792 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_23402 0 0 0 0 0 exosome 0.438718528912027 0.438717278570332 0.0419208 0 hPsi_site_17126 iPseU_CNN:0.0419208;iRNA_PseU:0 17127 chr14 20612737 20612737 1 + G A SKCM 20612736 + 20612716 20612756 41 CCATACTGTCATCTTTCCTTTGATGAACCCTGTTATTTATA CCATACTGTCATCTTTCCTTTAATGAACCCTGTTATTTATA < 41bp 0.522513594688302 0.865432027234917 0.27561808 0.5279623 prediction 0.685836865093229 Functional Gain - OR4N5 ENSG00000184394 CDS Human protein_coding chr14:20612736 chr14:20612737 synonymous SNV . 0 22 hPsi_associated_SNPs_23403 0 0 0 0 0 unknown 0.438719764391828 0.438719099258344 0.0559246 0 hPsi_site_17127 iPseU_CNN:0.0559246;iRNA_PseU:0 17128 chr15 75949545 75949545 1 + G A rs375706718 75949544 + 75949524 75949564 41 GAGAAGACCCTGCGCATGTATGACAACCTCTGACCGCGTGT GAGAAGACCCTGCGCATGTATAACAACCTCTGACCGCGTGT < 41bp 0.458520729132161 0.842917113676904 0.4071706 0.7260354 prediction 0.685834227353809 Functional Gain - SNX33 ENSG00000173548 CDS Human protein_coding chr15:75949544 chr15:75949545 nonsynonymous SNV 0.766 3 22 hPsi_associated_SNPs_23404 0 0 1 0 0 membrane 0.439104478508046 0.438720377929848 0.4520708 0 hPsi_site_17128 iPseU_CNN:0.4520708;iRNA_PseU:0 17129 chr7 44714111 44714111 1 + C A UCEC 44714110 + 44714090 44714130 41 TCAAGACCATCATTGACAAGTCTAGTGAGAATGGCGTGGAC TCAAGACCATCATTGACAAGTATAGTGAGAATGGCGTGGAC < 41bp 0.51397396379966 0.856890738239445 0.63310945 0.8941524 prediction 0.68583354887957 Functional Gain - OGDH ENSG00000105953 CDS Human protein_coding chr7:44714110 chr7:44714111 nonsynonymous SNV 0.911 5 22 hPsi_associated_SNPs_23405 0 0 1 0 1 Nucleus 0.438711320866915 0.438828760773741 0.5220859 0 hPsi_site_17129 iPseU_CNN:0.5220859;iRNA_PseU:0 17130 chr10 127530326 127530326 1 + G A STAD 127530325 + 127530305 127530345 41 AGGATACCTGTTACCATGGCTGCGATTGTTAGCACTTCATC AGGATACCTGTTACCATGGCTACGATTGTTAGCACTTCATC < 41bp 0.467128374569799 0.842913618231655 0.22754478 0.3432144 prediction 0.68582723646331 Functional Gain - DHX32 ENSG00000089876 CDS Human protein_coding chr10:127530325 chr10:127530326 nonsynonymous SNV 0.766 2 22 hPsi_associated_SNPs_23406 0 0 1 14 0 Ribosome 0.438734904127696 0.438408574783787 0 0 hPsi_site_17130 iPseU_CNN:0;iRNA_PseU:0 17131 chr11 55563508 55563508 1 + G A SKCM 55563507 + 55563487 55563527 41 CTGGGGCATGTTTGGCCCCTTGGTACTCCTTTGTTATGCTC CTGGGGCATGTTTGGCCCCTTAGTACTCCTTTGTTATGCTC < 41bp 0.475093570107392 0.842908395759777 0.33510673 0.39380413 prediction 0.685816791519554 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563507 chr11:55563508 synonymous SNV . 0 22 hPsi_associated_SNPs_23407 0 0 0 0 0 unknown 0.438718592209845 0.438718592978761 0 0 hPsi_site_17131 iPseU_CNN:0;iRNA_PseU:0 17132 chr16 2487288 2487288 1 + C A BLCA 2487287 + 2487267 2487307 41 AGCTGCTGCAAGGCCGTGGTTCACGAGAGCCTCAGGGCAGA AGCTGCTGCAAGGCCGTGGTTAACGAGAGCCTCAGGGCAGA < 41bp 0.488554394355593 0.842906730404295 0.3252317 0.42077124 prediction 0.685813460808589 Functional Gain - CCNF ENSG00000162063 CDS Human protein_coding chr16:2487287 chr16:2487288 nonsynonymous SNV 0.969 2 22 hPsi_associated_SNPs_23408 0 0 1 0 0 Cytosol 0.438486860765444 0.437850980939798 0 0 hPsi_site_17132 iPseU_CNN:0;iRNA_PseU:0 17133 chr17 48917011 48917011 1 + C A UCEC 48917010 + 48916990 48917030 41 TCATGTGTCTGCAGCAGGGCTCTGAGTGTGACATCTGGGAT TCATGTGTCTGCAGCAGGGCTATGAGTGTGACATCTGGGAT < 41bp 0.506038353033744 0.848944382874597 0.20088181 0.2764423 prediction 0.685812059681706 Functional Gain - WFIKKN2 ENSG00000173714 CDS Human protein_coding chr17:48917010 chr17:48917011 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_23409 0 0 0 0 0 exosome 0.438851523509392 0.438655438016457 0 0 hPsi_site_17133 iPseU_CNN:0;iRNA_PseU:0 17134 chr14 93154408 93154408 1 + G A UCEC 93154407 + 93154387 93154427 41 GCGGCCGCAGGCGCACCGGCTGTTCGTGCTGGTGGACGGGC GCGGCCGCAGGCGCACCGGCTATTCGTGCTGGTGGACGGGC < 41bp 0.45448289620127 0.842904145759277 0.40094644 0.6539487 prediction 0.685808291518554 Functional Gain - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93154407 chr14:93154408 synonymous SNV . 0 22 hPsi_associated_SNPs_23410 0 0 0 0 0 cytosol 0.440687354435368 0.441485121169028 0.3078974 0 hPsi_site_17134 iPseU_CNN:0.3078974;iRNA_PseU:0 17135 chr9 2718335 2718335 1 + G A COAD 2718334 + 2718314 2718354 41 TCAAGTACACGCCACGCTGCTGCCGCATCTGCTTCGAGGAG TCAAGTACACGCCACGCTGCTACCGCATCTGCTTCGAGGAG < 41bp 0.542286599099227 0.885189655747938 0.3156612 0.67757344 prediction 0.685806113297422 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718334 chr9:2718335 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23411 0 0 0 0 0 insoluble cytoplasm 0.43871703030408 0.43872318570316 0.35514688 0 hPsi_site_17135 iPseU_CNN:0.35514688;iRNA_PseU:0 17136 chr12 52409135 52409135 1 + G A rs550104351 52409134 + 52409114 52409154 41 CCGGGTCGGTTCCTGGCTGGTGTCTGCTGAGGGAGTGGGGG CCGGGTCGGTTCCTGGCTGGTATCTGCTGAGGGAGTGGGGG < 41bp 0.522924571597253 0.865826542206199 0.39391205 0.84590936 prediction 0.685803941217893 Functional Gain - GRASP ENSG00000161835 UTR3 Human protein_coding chr12:52409134 chr12:52409135 . . 0 22 hPsi_associated_SNPs_23412 0 0 0 0 0 exosome 0.438708669836544 0.438726933921514 0.69181872 0 hPsi_site_17136 iPseU_CNN:0.69181872;iRNA_PseU:0 17137 chr17 40767058 40767058 1 + G A BLCA 40767057 + 40767037 40767077 41 CCTGGGGCACCCAGGAGCAGTGAGTCCCCCAGGACAGGGAC CCTGGGGCACCCAGGAGCAGTAAGTCCCCCAGGACAGGGAC < 41bp 0.535334609537399 0.878231805080319 0.3060919 0.560774 prediction 0.685794391085841 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40767057 chr17:40767058 synonymous SNV . 0 22 hPsi_associated_SNPs_23413 0 0 1 0 0 Ribosome 0.438717962192065 0.43847389612579 0.121548 0 hPsi_site_17137 iPseU_CNN:0.121548;iRNA_PseU:0 17138 chr2 219499253 219499253 1 + G A UCEC 219499252 + 219499232 219499272 41 ATTTCCGCCAGAATGGCGGCTGTGGCTATGTGCTGAAGCCA ATTTCCGCCAGAATGGCGGCTATGGCTATGTGCTGAAGCCA < 41bp 0.554329665566018 0.897223612088053 0.2556816 0.44713295 prediction 0.68578789304407 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219499252 chr2:219499253 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_23414 0 0 0 0 1 chromatin 0.438718614238245 0.438720624030051 0 0 hPsi_site_17138 iPseU_CNN:0;iRNA_PseU:0 17139 chr16 19621671 19621671 1 + G A rs149360565 19621670 + 19621650 19621690 41 TTCAGAGTGCCTGCCCCGGTTGACATGCATGATCAGAGGGA TTCAGAGTGCCTGCCCCGGTTAACATGCATGATCAGAGGGA < 41bp 0.431702976722253 0.842890115660432 0.2508458 0.33560067 prediction 0.685780231320863 Functional Gain - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19621670 chr16:19621671 synonymous SNV . 0 22 hPsi_associated_SNPs_23415 0 0 0 0 1 Cytosol 0.438417935125271 0.438700377000717 0 0 hPsi_site_17139 iPseU_CNN:0;iRNA_PseU:0 17140 chr19 48918182 48918182 1 + C A UCEC 48918181 + 48918161 48918201 41 AAGGGTTTCTGCATCGACATTCTGAAGCGGCTGGCGCATAC AAGGGTTTCTGCATCGACATTATGAAGCGGCTGGCGCATAC < 41bp 0.499653693127774 0.842888738279014 0.7000152 0.76757395 prediction 0.685777476558028 Functional Gain - GRIN2D ENSG00000105464 CDS Human protein_coding chr19:48918181 chr19:48918182 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23416 0 0 1 0 1 chromatin 0.438718732873639 0.438348432480421 0.1351175 0 hPsi_site_17140 iPseU_CNN:0.1351175;iRNA_PseU:0 17141 chr10 72298051 72298051 1 + G A LGG 72298050 + 72298030 72298070 41 CTGCAGTACCCGCTGGCCTTTGCCCTCAGTTTCAGCCGCTG CTGCAGTACCCGCTGGCCTTTACCCTCAGTTTCAGCCGCTG < 41bp 0.431464295259439 0.842883492248574 0.2118415 0.39602286 prediction 0.685766984497148 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72298050 chr10:72298051 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23417 0 0 0 0 1 Ribosome 0.438718591812725 0.438718589541738 0 0 hPsi_site_17141 iPseU_CNN:0;iRNA_PseU:0 17142 chr17 45993966 45993966 1 + G A COAD 45993965 + 45993945 45993985 41 TCACCGTCCAGTCACAAGCCTGTCCCCATCAAGCCAGCCCC TCACCGTCCAGTCACAAGCCTATCCCCATCAAGCCAGCCCC < 41bp 0.427867808527279 0.842877853244897 0.29042518 0.40636674 prediction 0.685755706489795 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:45993965 chr17:45993966 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23418 0 0 1 0 0 Cytosol 0.438718615134701 0.438718922766521 0 0 hPsi_site_17142 iPseU_CNN:0;iRNA_PseU:0 17143 chr15 89195511 89195511 1 + G A LUAD 89195510 + 89195490 89195530 41 GCGTGTCTCCCTGCGGGTGCTGAGTGAGCGCCTCCTACACA GCGTGTCTCCCTGCGGGTGCTAAGTGAGCGCCTCCTACACA < 41bp 0.539078118299084 0.881949424142281 0.24530837 0.6735824 prediction 0.685742611686393 Functional Gain - ISG20 ENSG00000172183 CDS Human protein_coding chr15:89195510 chr15:89195511 synonymous SNV . 0 22 hPsi_associated_SNPs_23419 0 0 0 0 1 Cytosol 0.438731126994628 0.438950654076475 0.3471648 0 hPsi_site_17143 iPseU_CNN:0.3471648;iRNA_PseU:0 17144 chr10 21805163 21805163 1 + G T UCEC 21805164 - 21805144 21805184 41 AGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCC AGAGCTGGGCCCCCAAAGCATATCCGGTGTACTGCCCGGCC < 41bp 0.50498441374502 0.847847987513391 0.51402336 0.5413864 prediction 0.685727147536742 Functional Gain - SKIDA1 ENSG00000180592 CDS Human protein_coding chr10:21805164 chr10:21805163 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_23420 0 0 0 0 0 Nucleus 0.438718592995102 0.438718592995102 0.05472608 0 hPsi_site_17144 iPseU_CNN:0.05472608;iRNA_PseU:0 17145 chr11 7509417 7509417 1 + C A UCEC 7509416 + 7509396 7509436 41 CATTCAAGAATTCCAAGAGTTCTCAAAAAATATATCTGTCA CATTCAAGAATTCCAAGAGTTATCAAAAAATATATCTGTCA < 41bp 0.506091548796933 0.848950690686852 0.2549404 0.37475285 prediction 0.685718283779839 Functional Gain - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7509416 chr11:7509417 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23421 0 0 0 0 1 exosome 0.438711423974135 0.438701015885277 0 0 hPsi_site_17145 iPseU_CNN:0;iRNA_PseU:0 17146 chr1 158325852 158325852 1 + G A SKCM 158325851 + 158325831 158325871 41 AGCTGGCCTGTCCTGTCGGGTGAAACACAGCAGTCTAGGGG AGCTGGCCTGTCCTGTCGGGTAAAACACAGCAGTCTAGGGG < 41bp 0.518624205469891 0.861480584740575 0.32762948 0.73460317 prediction 0.685712758541369 Functional Gain - CD1E ENSG00000158488 CDS Human protein_coding chr1:158325851 chr1:158325852 synonymous SNV . 0 22 hPsi_associated_SNPs_23422 0 0 0 0 1 exosome 0.438718572747102 0.438718592995044 0.46920634 0 hPsi_site_17146 iPseU_CNN:0.46920634;iRNA_PseU:0 17147 chr1 47283647 47283647 1 + C A GBM 47283646 + 47283626 47283666 41 TCTGCCCACAGGAAGCCTGATCTCTATGCATATCTATGCCC TCTGCCCACAGGAAGCCTGATATCTATGCATATCTATGCCC < 41bp 0.50489365982758 0.847749968554663 0.53925616 0.7686881 prediction 0.685712617454167 Functional Gain - CYP4B1 ENSG00000142973 CDS Human protein_coding chr1:47283646 chr1:47283647 synonymous SNV . 0 22 hPsi_associated_SNPs_23423 0 0 0 0 2 exosome 0.438718585170429 0.438718590659099 0.45886388 0 hPsi_site_17147 iPseU_CNN:0.45886388;iRNA_PseU:0 17148 chr12 1612212 1612212 1 + G A rs189548542 1612211 + 1612191 1612231 41 AGCTGGCAAGACCTCTAAGCTGTTCCTGCTTCTGCTCTCCT AGCTGGCAAGACCTCTAAGCTATTCCTGCTTCTGCTCTCCT < 41bp 0.491015207055329 0.842852804696482 0.39323118 0.6094831 prediction 0.685705609392964 Functional Gain - LINC00942 ENSG00000249628 ncRNA_exonic Human lincRNA chr12:1612211 chr12:1612212 . . 0 22 hPsi_associated_SNPs_23424 0 0 1 0 0 unknown 0.438716015872573 0.438717225057785 0.2189662 0 hPsi_site_17148 iPseU_CNN:0.2189662;iRNA_PseU:0 17149 chr16 2962035 2962035 1 + G A rs113176511 2962034 + 2962014 2962054 41 AGGTCGGGGCTGGGAGCTGGTGCCCGGGTCGGGGTGGCGGC AGGTCGGGGCTGGGAGCTGGTACCCGGGTCGGGGTGGCGGC < 41bp 0.506871903021711 0.849721197403392 0.40014178 0.75673497 prediction 0.685698588763363 Functional Gain - FLYWCH1 ENSG00000059122 UTR5 Human protein_coding chr16:2962034 chr16:2962035 . . 0 22 hPsi_associated_SNPs_23425 0 0 1 0 0 chromatin 0.43872111920621 0.438975601394825 0.51346994 0 hPsi_site_17149 iPseU_CNN:0.51346994;iRNA_PseU:0 17150 chr1 6639374 6639374 1 + G A rs115714015 6639373 + 6639353 6639393 41 CAGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGG CAGCTACCTGGGTAAGGACTTACCAGAGAACTACAACGAGG < 41bp 0.443800649292805 0.842841104530859 0.70531774 0.8200273 prediction 0.685682209061719 Functional Gain - TAS1R1 ENSG00000173662 CDS Human protein_coding chr1:6639373 chr1:6639374 synonymous SNV . 0 22 hPsi_associated_SNPs_23426 0 0 0 0 0 membrane 0.438724605527986 0.438718593665609 0.22941912 0 hPsi_site_17150 iPseU_CNN:0.22941912;iRNA_PseU:0 17151 chr20 10603886 10603886 1 + G A OV 10603885 + 10603865 10603905 41 TAAGGAAGAGTTGCATGTTTTGGAAAGTCTCTCCTCCAGAC TAAGGAAGAGTTGCATGTTTTAGAAAGTCTCTCCTCCAGAC < 41bp 0.465346809621715 0.842838715090905 0.4373568 0.5987529 prediction 0.685677430181811 Functional Gain - SLX4IP ENSG00000149346 CDS Human protein_coding chr20:10603885 chr20:10603886 synonymous SNV . 0 22 hPsi_associated_SNPs_23427 0 0 0 0 0 chromatin 0.438718363635839 0.438714993718939 0.1975058 0 hPsi_site_17151 iPseU_CNN:0.1975058;iRNA_PseU:0 17152 chr15 41023326 41023326 1 + G A BLCA 41023325 + 41023305 41023345 41 TCTCCCTGTCTTCCTGAAGCTGAAGCTATGTTCGCCATTAA TCTCCCTGTCTTCCTGAAGCTAAAGCTATGTTCGCCATTAA < 41bp 0.544001956912721 0.886838711172954 0.24744695 0.32516098 prediction 0.685673508520466 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41023325 chr15:41023326 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23428 0 0 1 0 1 Cytosol 0.439057406454183 0.43872082250073 0 0 hPsi_site_17152 iPseU_CNN:0;iRNA_PseU:0 17153 chr18 33271060 33271060 1 + C A UCEC 33271059 + 33271039 33271079 41 AAAGCTACACCTTACACGTTTCCAGGAGGCACAGGGCAGAT AAAGCTACACCTTACACGTTTACAGGAGGCACAGGGCAGAT < 41bp 0.505325603197554 0.848156070825022 0.2329342 0.30607468 prediction 0.685660935254937 Functional Gain - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33271059 chr18:33271060 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23429 0 0 1 0 2 Endoplasmic reticulum 0.438718609410174 0.438718634785765 0 0 hPsi_site_17153 iPseU_CNN:0;iRNA_PseU:0 17154 chr11 67155044 67155044 1 + G A rs138938893 67155043 + 67155023 67155063 41 AACCCCATAACCCCATTAGGTGTCAGGGGCAGAAACAGGAC AACCCCATAACCCCATTAGGTATCAGGGGCAGAAACAGGAC < 41bp 0.456991859117288 0.842828473838092 0.16777724 0.34481943 prediction 0.685656947676185 Functional Gain - LOC100130987 ENSG00000175505;ENSG00000172613 intergenic Human other chr11:67155043 chr11:67155044 . . 0 22 hPsi_associated_SNPs_23430 0 0 0 0 1 unknown 0.438718592994688 0.438718592994632 0 0 hPsi_site_17154 iPseU_CNN:0;iRNA_PseU:0 17155 chr17 30348507 30348507 1 + C A GBM 30348506 + 30348486 30348526 41 GCCCCTGGGGCCAGAGCCGTTCTTGGCTGCACATCAGGACT GCCCCTGGGGCCAGAGCCGTTATTGGCTGCACATCAGGACT < 41bp 0.498736839141705 0.842826218207715 0.35241362 0.6491618 prediction 0.685652436415429 Functional Gain - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30348506 chr17:30348507 nonsynonymous SNV 0.023 0 22 hPsi_associated_SNPs_23431 0 0 1 0 0 chromatin 0.438719617082763 0.438718343780085 0.2983236 0 hPsi_site_17155 iPseU_CNN:0.2983236;iRNA_PseU:0 17156 chr1 215792564 215792564 1 + G A UCEC 215792563 + 215792543 215792583 41 GTGATTTGAGCACATCTCGCTGTGCTACTCCTAACATCAGT GTGATTTGAGCACATCTCGCTATGCTACTCCTAACATCAGT < 41bp 0.547719313468921 0.890544479217599 0.2893021 0.33641854 prediction 0.685650331497355 Functional Gain - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215792563 chr1:215792564 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23432 0 0 1 0 3 Ribosome 0.438713227245933 0.438723453552716 0 0 hPsi_site_17156 iPseU_CNN:0;iRNA_PseU:0 17157 chr9 139981458 139981458 1 + G A rs573766677 139981457 + 139981437 139981477 41 GTTGACGGCGCTGCGATGGCTGCCTGCGAGGGCAGGAGAAG GTTGACGGCGCTGCGATGGCTACCTGCGAGGGCAGGAGAAG < 41bp 0.49936014148398 0.842823347483553 0.26932335 0.64916956 prediction 0.685646694967106 Functional Gain - MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139981457 chr9:139981458 nonsynonymous SNV 0.058 1 22 hPsi_associated_SNPs_23433 0 0 1 0 0 Ribosome 0.438735467754366 0.438717496632597 0.29833912 0 hPsi_site_17157 iPseU_CNN:0.29833912;iRNA_PseU:0 17158 chr2 54014465 54014465 1 + G A STAD 54014464 + 54014444 54014484 41 GCCCTTCCTCAACTCAGCGATGACATCCCTTTCCGAGTCAA GCCCTTCCTCAACTCAGCGATAACATCCCTTTCCGAGTCAA < 41bp 0.532731278854983 0.875552537136347 0.28624445 0.384452 prediction 0.68564251656273 Functional Gain - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014464 chr2:54014465 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_23434 0 0 1 0 1 Endoplasmic reticulum 0.43871859261289 0.43871859218142 0 0 hPsi_site_17158 iPseU_CNN:0;iRNA_PseU:0 17159 chr19 55044967 55044967 1 + C A GBM 55044966 + 55044946 55044986 41 TCCAGGTGCTCAGGACAAGTTCTCCCTGTCAGCCTGGCCGA TCCAGGTGCTCAGGACAAGTTATCCCTGTCAGCCTGGCCGA < 41bp 0.504920604505037 0.847740112749368 0.35236138 0.33904827 prediction 0.685639016488662 Functional Gain - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55044966 chr19:55044967 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23435 0 0 0 2 1 Nucleus 0.438718613630388 0.438718848392609 0 0 hPsi_site_17159 iPseU_CNN:0;iRNA_PseU:0 17160 chr6 27777984 27777984 1 + G A LUAD 27777983 + 27777963 27778003 41 AAGCCCCATCGCTATCGGCCTGGTACAGTGGCTCTCCGCGA AAGCCCCATCGCTATCGGCCTAGTACAGTGGCTCTCCGCGA < 41bp 0.46837081910431 0.842804750697754 0.12741509 0.26766416 prediction 0.685609501395507 Functional Gain - HIST1H3H ENSG00000203813 CDS Human other chr6:27777983 chr6:27777984 nonsynonymous SNV 0.079 0 22 hPsi_associated_SNPs_23436 0 0 1 0 0 cytosol 0.438719020148596 0.438718592995121 0 0 hPsi_site_17160 iPseU_CNN:0;iRNA_PseU:0 17161 chr20 30602724 30602724 1 + C A LUAD 30602723 + 30602703 30602743 41 CCAGGGCTTTGTATCCCCCATCCGAAGGCTGGTGTTCCCCA CCAGGGCTTTGTATCCCCCATACGAAGGCTGGTGTTCCCCA < 41bp 0.503974775386485 0.846779392969139 0.29615718 0.36099958 prediction 0.685609235165307 Functional Gain - CCM2L ENSG00000101331 CDS Human protein_coding chr20:30602723 chr20:30602724 synonymous SNV . 0 22 hPsi_associated_SNPs_23437 0 0 0 0 1 exosome 0.43871861918727 0.438698070403888 0 0 hPsi_site_17161 iPseU_CNN:0;iRNA_PseU:0 17162 chr1 53676457 53676457 1 + G A HNSC 53676456 + 53676436 53676476 41 GGCTCTACTGCCGTCCACTTTGAGCACTCTTGGGGTGATGG GGCTCTACTGCCGTCCACTTTAAGCACTCTTGGGGTGATGG < 41bp 0.445125650794228 0.842804420588225 0.36954385 0.42408976 prediction 0.685608841176451 Functional Gain - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53676456 chr1:53676457 nonsynonymous SNV 0.914 5 22 hPsi_associated_SNPs_23438 0 0 1 0 0 Ribosome 0.438717207282011 0.438718630695047 0 0 hPsi_site_17162 iPseU_CNN:0;iRNA_PseU:0 17163 chr10 118310665 118310665 1 + C A STAD 118310664 + 118310644 118310684 41 GTGTGGACTGGAAAGGTGGCTCCCGAACTGGATACACACAA GTGTGGACTGGAAAGGTGGCTACCGAACTGGATACACACAA < 41bp 0.512417718121603 0.855216183050019 0.21426529 0.39494738 prediction 0.685596929856833 Functional Gain - PNLIP ENSG00000175535 CDS Human protein_coding chr10:118310664 chr10:118310665 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_23439 0 0 0 0 2 unknown 0.438670730475897 0.438535221563353 0 0 hPsi_site_17163 iPseU_CNN:0;iRNA_PseU:0 17164 chr3 9485044 9485044 1 + C A UCEC 9485043 + 9485023 9485063 41 ACCTGTGCATCTATGCTGTGTCTGCCATCACCAAGGATGCT ACCTGTGCATCTATGCTGTGTATGCCATCACCAAGGATGCT < 41bp 0.478464591947424 0.842789665069783 0.3165533 0.6277292 prediction 0.685579330139566 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9485043 chr3:9485044 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23440 0 0 1 0 2 Nucleus 0.334013542337031 0.433361838315982 0.2554584 0 hPsi_site_17164 iPseU_CNN:0.2554584;iRNA_PseU:0 17165 chr12 48921756 48921756 1 + G A SKCM 48921755 + 48921735 48921775 41 TGCACAAAGGCCAGGCCAGATGGAAGAGACCAGCCTTCACC TGCACAAAGGCCAGGCCAGATAGAAGAGACCAGCCTTCACC < 41bp 0.448283198846073 0.842787420391607 0.35812408 0.40096226 prediction 0.685574840783215 Functional Gain - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48921755 chr12:48921756 stopgain 0.381 0 22 hPsi_associated_SNPs_23441 0 0 0 0 1 unknown 0.438717457768384 0.438718597502043 0 0 hPsi_site_17165 iPseU_CNN:0;iRNA_PseU:0 17166 chr19 3942127 3942127 1 + C A UCEC 3942126 + 3942106 3942146 41 AGAGGAGCTCTTCCGTGAAGTCCTGGAAGACATTCAGAACT AGAGGAGCTCTTCCGTGAAGTACTGGAAGACATTCAGAACT < 41bp 0.507709237594584 0.850493180809695 0.22147411 0.8035164 prediction 0.685567886430223 Functional Gain - NMRK2 ENSG00000077009 CDS Human protein_coding chr19:3942126 chr19:3942127 synonymous SNV . 0 22 hPsi_associated_SNPs_23442 0 0 0 0 1 exosome 0.438718645955769 0.438718492571654 0.6070328 0 hPsi_site_17166 iPseU_CNN:0.6070328;iRNA_PseU:0 17167 chr10 104157768 104157768 1 + C A UCEC 104157767 + 104157747 104157787 41 GGGCATCAAACCTGAAGATTTCTCGAATGGACAAGACAGCA GGGCATCAAACCTGAAGATTTATCGAATGGACAAGACAGCA < 41bp 0.487992720446812 0.842782090346906 0.34950805 0.54694265 prediction 0.685564180693811 Functional Gain - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104157767 chr10:104157768 nonsynonymous SNV 0.894 4 22 hPsi_associated_SNPs_23443 0 0 1 0 2 chromatin 0.438718638878564 0.43871938335877 0.0938852999999999 0 hPsi_site_17167 iPseU_CNN:0.0938852999999999;iRNA_PseU:0 17168 chr1 75198988 75198988 1 + C T BLCA 75198989 - 75198969 75199009 41 GTCAACACTGCCCTTCCGGCTGAGGTCCGCTTTGCTCAAAC GTCAACACTGCCCTTCCGGCTAAGGTCCGCTTTGCTCAAAC < 41bp 0.529957237079527 0.872737433317013 0.3751423 0.635308 prediction 0.685560392474971 Functional Gain - TYW3 ENSG00000162623 CDS Human protein_coding chr1:75198989 chr1:75198988 synonymous SNV . 0 22 hPsi_associated_SNPs_23444 0 0 0 0 0 chromatin 0.433971944005886 0.438717578449035 0.270616 0 hPsi_site_17168 iPseU_CNN:0.270616;iRNA_PseU:0 17169 chr16 3452198 3452198 1 + C A THYM 3452197 + 3452177 3452217 41 CTGGACCCCAAGAGGCTCTCTCCCAGCTCCGACAGCTCTGC CTGGACCCCAAGAGGCTCTCTACCAGCTCCGACAGCTCTGC < 41bp 0.50579505669611 0.848561256035895 0.20699924 0.40882015 prediction 0.68553239867957 Functional Gain - ZNF174 ENSG00000103343 CDS Human protein_coding chr16:3452197 chr16:3452198 nonsynonymous SNV 0.405 1 22 hPsi_associated_SNPs_23445 0 0 0 0 0 Ribosome 0.438696145496069 0.43867332330605 0 0 hPsi_site_17169 iPseU_CNN:0;iRNA_PseU:0 17170 chr12 5604125 5604125 1 + G A UCEC 5604124 + 5604104 5604144 41 ATAGACACGTCCTGTGTGTGTGCCTTGTCGAGAAAAATCGG ATAGACACGTCCTGTGTGTGTACCTTGTCGAGAAAAATCGG < 41bp 0.459054043064553 0.84276448168924 0.18637967 0.59947556 prediction 0.685528963378479 Functional Gain - NTF3 ENSG00000185652 CDS Human protein_coding chr12:5604124 chr12:5604125 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23446 0 0 0 0 0 exosome 0.440449929799567 0.438703722281495 0.19895112 0 hPsi_site_17170 iPseU_CNN:0.19895112;iRNA_PseU:0 17171 chr4 1360206 1360206 1 + G A UCS 1360205 + 1360185 1360225 41 GCCACACATCCCCGACCACTTGCGGCCTGAGTATGGTGAGC GCCACACATCCCCGACCACTTACGGCCTGAGTATGGTGAGC < 41bp 0.432066766422639 0.842763626204649 0.39790195 0.76781 prediction 0.685527252409298 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1360205 chr4:1360206 synonymous SNV . 0 22 hPsi_associated_SNPs_23447 0 0 1 0 2 Nucleus 0.438718580765781 0.438718593478011 0.53562 0 hPsi_site_17171 iPseU_CNN:0.53562;iRNA_PseU:0 17172 chr17 77710932 77710932 1 + C A GBM 77710931 + 77710911 77710951 41 CCGCGCTGTGGGCCCTAGCTTCAGGGCGGGCCTGGAGGTGG CCGCGCTGTGGGCCCTAGCTTAAGGGCGGGCCTGGAGGTGG < 41bp 0.512676529591499 0.855434643761973 0.3656186 0.59987974 prediction 0.685516228340948 Functional Gain - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77710931 chr17:77710932 nonsynonymous SNV 0.730 4 22 hPsi_associated_SNPs_23448 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0.19975948 0 hPsi_site_17172 iPseU_CNN:0.19975948;iRNA_PseU:0 17173 chr16 57789289 57789289 1 + G A LIHC 57789288 + 57789268 57789308 41 CCCCCAGCAGGCCGAGCTGGTGGACGAGGATGCCATGTCAC CCCCCAGCAGGCCGAGCTGGTAGACGAGGATGCCATGTCAC < 41bp 0.432975061382146 0.842749799366428 0.249511 0.6795241 prediction 0.685499598732856 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57789288 chr16:57789289 synonymous SNV . 0 22 hPsi_associated_SNPs_23449 0 0 1 0 1 Cytosol 0.438718592994903 0.438766476987609 0.3590482 0 hPsi_site_17173 iPseU_CNN:0.3590482;iRNA_PseU:0 17174 chr12 4853837 4853837 1 + G A SKCM 4853836 + 4853816 4853856 41 AGCAGACGTGGTCGCCATCTTGGATGCTCACATTGAAGTCA AGCAGACGTGGTCGCCATCTTAGATGCTCACATTGAAGTCA < 41bp 0.437049158953914 0.842748824111774 0.17302588 0.23767233 prediction 0.685497648223547 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4853836 chr12:4853837 synonymous SNV . 0 22 hPsi_associated_SNPs_23450 0 0 0 0 1 cytosol 0.439213981988288 0.455238157785334 0 0 hPsi_site_17174 iPseU_CNN:0;iRNA_PseU:0 17175 chr19 52716323 52716323 1 + C A CESC 52716322 + 52716302 52716342 41 GCCAGGCCGCTGAAGACAAGTCCTGGCGCGTCCGCTACATG GCCAGGCCGCTGAAGACAAGTACTGGCGCGTCCGCTACATG < 41bp 0.475762013547078 0.842747558251378 0.16030458 0.41387722 prediction 0.685495116502756 Functional Gain - PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52716322 chr19:52716323 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_23451 0 0 1 0 1 Ribosome 0.438718752423636 0.438729482143398 0 0 hPsi_site_17175 iPseU_CNN:0;iRNA_PseU:0 17176 chr14 105954549 105954549 1 + G A BLCA 105954548 + 105954528 105954568 41 GGACTGGCATCGGCCCTGCCTGAAGTGCGAGAAATGTGGGA GGACTGGCATCGGCCCTGCCTAAAGTGCGAGAAATGTGGGA < 41bp 0.551255939098337 0.894000512280642 0.21413428 0.36092985 prediction 0.68548914636461 Functional Gain - CRIP1 ENSG00000213145;ENSG00000257341 CDS Human other chr14:105954548 chr14:105954549 synonymous SNV . 0 22 hPsi_associated_SNPs_23452 0 0 1 0 2 Ribosome 0.438718740089959 0.438718577661367 0 0 hPsi_site_17176 iPseU_CNN:0;iRNA_PseU:0 17177 chr1 90399750 90399750 1 + G A UCEC 90399749 + 90399729 90399769 41 AGTTACATATCCATTATTTGTGTTTATGGCTTTATCTGCCT AGTTACATATCCATTATTTGTATTTATGGCTTTATCTGCCT < 41bp 0.47575333329834 0.842743776789327 0.30778998 0.32349628 prediction 0.685487553578654 Functional Gain - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90399749 chr1:90399750 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23453 0 0 1 0 0 Nucleus 0.438718619988115 0.43871860978554 0 0 hPsi_site_17177 iPseU_CNN:0;iRNA_PseU:0 17178 chr4 88902690 88902690 1 + G A CESC 88902689 + 88902669 88902709 41 GATATGGATGATGAAGATGATGATGACCATGTGGACAGCCA GATATGGATGATGAAGATGATAATGACCATGTGGACAGCCA < 41bp 0.457839151250378 0.842730698003591 0.2609008 0.3455383 prediction 0.685461396007181 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88902689 chr4:88902690 nonsynonymous SNV 0.207 0 22 hPsi_associated_SNPs_23454 0 0 1 0 1 insoluble cytoplasm 0.441203028851125 0.438335900351749 0 0 hPsi_site_17178 iPseU_CNN:0;iRNA_PseU:0 17179 chr9 126134511 126134511 1 + G A UCEC 126134510 + 126134490 126134530 41 TCACCTGGAATGACTTCCACTGTACCTGCCCTGCCAATTTC TCACCTGGAATGACTTCCACTATACCTGCCCTGCCAATTTC < 41bp 0.431913793727006 0.842729409249784 0.2828956 0.35792303 prediction 0.685458818499568 Functional Gain - CRB2 ENSG00000148204 CDS Human protein_coding chr9:126134510 chr9:126134511 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_23455 0 0 0 0 1 exosome 0.438718592995037 0.438718593007727 0 0 hPsi_site_17179 iPseU_CNN:0;iRNA_PseU:0 17180 chr3 52727240 52727240 1 + C A UCEC 52727239 + 52727219 52727259 41 CTGTCCCAGGCTACAGGAATTCTCTGGAATTTTTTACTGTG CTGTCCCAGGCTACAGGAATTATCTGGAATTTTTTACTGTG < 41bp 0.494207427736552 0.842713485428234 0.28601086 0.32858187 prediction 0.685426970856467 Functional Gain - GNL3 ENSG00000163938 CDS Human protein_coding chr3:52727239 chr3:52727240 nonsynonymous SNV 0.729 1 22 hPsi_associated_SNPs_23456 0 0 1 0 1 Ribosome 0.438613386415446 0.438718591526338 0 0 hPsi_site_17180 iPseU_CNN:0;iRNA_PseU:0 17181 chr6 74072867 74072867 1 + G A SKCM 74072866 + 74072846 74072886 41 CCAGGGTATGTCCCAAATCTTGATTCACGTGAATCGATTGG CCAGGGTATGTCCCAAATCTTAATTCACGTGAATCGATTGG < 41bp 0.439682436683011 0.842710503179561 0.2218867 0.32206053 prediction 0.685421006359123 Functional Gain - KHDC3L ENSG00000203908 CDS Human protein_coding chr6:74072866 chr6:74072867 synonymous SNV . 0 22 hPsi_associated_SNPs_23457 0 0 0 0 1 unknown 0.438717119206158 0.438718592968237 0 0 hPsi_site_17181 iPseU_CNN:0;iRNA_PseU:0 17182 chr16 30978324 30978324 1 + C A rs11866157 30978323 + 30978303 30978343 41 GAGCGGGGGCACTACGGGCATCGAGGCTTTCGCCTTTGGGT GAGCGGGGGCACTACGGGCATAGAGGCTTTCGCCTTTGGGT < 41bp 0.498278323912888 0.842702376110605 0.27616966 0.5650914 prediction 0.68540475222121 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30978323 chr16:30978324 synonymous SNV . 0 22 hPsi_associated_SNPs_23458 0 0 1 0 1 Cytosol 0.438717717150739 0.438718575125388 0.1301828 0 hPsi_site_17182 iPseU_CNN:0.1301828;iRNA_PseU:0 17183 chr11 62505762 62505762 1 + G A PRAD 62505761 + 62505741 62505781 41 TTCTCCATCATCTTCCAAGATGCCAACGTCCGGCGGTACCT TTCTCCATCATCTTCCAAGATACCAACGTCCGGCGGTACCT < 41bp 0.459482707446305 0.842697708477627 0.22346672 0.3311427 prediction 0.685395416955255 Functional Gain - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62505761 chr11:62505762 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_23459 0 0 1 0 1 Ribosome 0.438271857900292 0.438500006500118 0 0 hPsi_site_17183 iPseU_CNN:0;iRNA_PseU:0 17184 chr4 55565898 55565898 1 + C A UCEC 55565897 + 55565877 55565917 41 CAATAAAAGATGTGTCTAGTTCTGTGTACTCAACGTGGAAA CAATAAAAGATGTGTCTAGTTATGTGTACTCAACGTGGAAA < 41bp 0.499027838080673 0.842694174240724 0.5763014 0.7634947 prediction 0.685388348481449 Functional Gain - KIT ENSG00000157404 CDS Human protein_coding chr4:55565897 chr4:55565898 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23460 0 0 1 0 1 Endoplasmic reticulum 0.438724516941862 0.435406141941988 0.3743866 0 hPsi_site_17184 iPseU_CNN:0.3743866;iRNA_PseU:0 17185 chr10 135125323 135125323 1 + G A BLCA 135125322 + 135125302 135125342 41 GCCTCCCCTGCACCGGCAGGTGAGAGGCGGATCTACAGACA GCCTCCCCTGCACCGGCAGGTAAGAGGCGGATCTACAGACA < 41bp 0.554791245976808 0.897484032605593 0.24917912 0.7986994 prediction 0.685385573257568 Functional Gain - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135125322 chr10:135125323 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_23461 0 0 1 0 1 Ribosome 0.43871854803347 0.438718597973989 0.5973988 0 hPsi_site_17185 iPseU_CNN:0.5973988;iRNA_PseU:0 17186 chr17 74538650 74538650 1 + G A HNSC 74538649 + 74538629 74538669 41 GTTTAGGGAGAAAGAACCTCTGAAGTAAGCCCTCACCTCTG GTTTAGGGAGAAAGAACCTCTAAAGTAAGCCCTCACCTCTG < 41bp 0.455689936723055 0.842690275417441 0.28192487 0.33894718 prediction 0.685380550834881 Functional Gain - PRCD ENSG00000214140 CDS Human protein_coding chr17:74538649 chr17:74538650 synonymous SNV . 0 22 hPsi_associated_SNPs_23462 0 0 0 0 2 exosome 0.438718593122215 0.43871859268618 0 0 hPsi_site_17186 iPseU_CNN:0;iRNA_PseU:0 17187 chr20 44751265 44751265 1 + C A COAD 44751264 + 44751244 44751284 41 CTCAGACCTAGGGCTTCGGGTCCAGCAGAAGGGCACCTCAG CTCAGACCTAGGGCTTCGGGTACAGCAGAAGGGCACCTCAG < 41bp 0.509810672752895 0.852500801819273 0.30897868 0.6308255 prediction 0.685380258132757 Functional Gain - CD40 ENSG00000101017 CDS Human protein_coding chr20:44751264 chr20:44751265 synonymous SNV . 0 22 hPsi_associated_SNPs_23463 0 0 0 0 1 Endoplasmic reticulum 0.438718518007753 0.438733353342681 0.261651 0 hPsi_site_17187 iPseU_CNN:0.261651;iRNA_PseU:0 17188 chr19 5654428 5654428 1 + G A COAD 5654427 + 5654407 5654447 41 AATGGATAAATCCAAAGGGGTGCCTGTGATTAGTGTAAAAA AATGGATAAATCCAAAGGGGTACCTGTGATTAGTGTAAAAA < 41bp 0.441385569123555 0.8426873477317 0.17170173 0.34904546 prediction 0.685374695463401 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5654427 chr19:5654428 synonymous SNV . 0 22 hPsi_associated_SNPs_23464 0 0 1 0 1 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_17188 iPseU_CNN:0;iRNA_PseU:0 17189 chr10 103912209 103912209 1 + G A rs116928523 103912208 + 103912188 103912228 41 CCGCGTGGTTCCCAGCGACCTGTATCCCCTCGTGCTCGGCT CCGCGTGGTTCCCAGCGACCTATATCCCCTCGTGCTCGGCT < 41bp 0.53808977720948 0.880775196637583 0.52869123 0.6398216 prediction 0.685370838856206 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103912208 chr10:103912209 synonymous SNV . 0 22 hPsi_associated_SNPs_23465 0 0 1 0 1 Nucleus 0.438721400205964 0.438718601936342 0.22226074 0 hPsi_site_17189 iPseU_CNN:0.22226074;iRNA_PseU:0 17190 chrX 100880282 100880282 1 + G A STAD 100880281 + 100880261 100880301 41 GCTACCCGGGCACGTCGGGCTGTCCAGAAACGGGCTTCCCC GCTACCCGGGCACGTCGGGCTATCCAGAAACGGGCTTCCCC < 41bp 0.4444410500243 0.842684328948467 0.2772268 0.6182892 prediction 0.685368657896934 Functional Gain - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880281 chrX:100880282 nonsynonymous SNV 0.625 0 22 hPsi_associated_SNPs_23466 0 0 1 0 0 Endoplasmic reticulum 0.438718589450495 0.438718579278636 0.2365784 0 hPsi_site_17190 iPseU_CNN:0.2365784;iRNA_PseU:0 17191 chr19 45381682 45381682 1 + G A rs144068489 45381681 + 45381661 45381701 41 CGATCCGAAAGCTCAGGTGTTGGGAAATGGGGACCCCGTCT CGATCCGAAAGCTCAGGTGTTAGGAAATGGGGACCCCGTCT < 41bp 0.460568082135878 0.842676385577231 0.29319704 0.39659852 prediction 0.685352771154463 Functional Gain - NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45381681 chr19:45381682 stopgain 0.945 0 22 hPsi_associated_SNPs_23467 0 0 1 0 0 Ribosome 0.438718610261506 0.438707329838581 0 0 hPsi_site_17191 iPseU_CNN:0;iRNA_PseU:0 17192 chrX 57162317 57162317 1 + C T KIRC 57162318 - 57162298 57162338 41 AGTGGAAACCAAACCCTCTGTGTATTTCATCAAGTTTGATG AGTGGAAACCAAACCCTCTGTATATTTCATCAAGTTTGATG < 41bp 0.531228539400175 0.873904409875709 0.39172128 0.6338852 prediction 0.685351740951069 Functional Gain - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162318 chrX:57162317 synonymous SNV . 0 22 hPsi_associated_SNPs_23468 0 0 0 0 0 exosome 0.438719211131645 0.438704281052764 0.2677704 0 hPsi_site_17192 iPseU_CNN:0.2677704;iRNA_PseU:0 17193 chr11 284360 284360 1 + G A SKCM 284359 + 284339 284379 41 GCGGGACTGCGTATGCTGAGTGAGGGCCTAGCCTGGCCGCA GCGGGACTGCGTATGCTGAGTAAGGGCCTAGCCTGGCCGCA < 41bp 0.445177338924267 0.84267282603496 0.51128024 0.71210194 prediction 0.685345652069919 Functional Gain - NLRP6 ENSG00000174885 CDS Human protein_coding chr11:284359 chr11:284360 nonsynonymous SNV 0.743 0 22 hPsi_associated_SNPs_23469 0 0 0 0 1 chromatin 0.438718511000653 0.438718499554846 0.4016434 0 hPsi_site_17193 iPseU_CNN:0.4016434;iRNA_PseU:0 17194 chr8 66989033 66989033 1 + G A SKCM 66989032 + 66989012 66989052 41 ATACGACAAGTACGGATCGCTGGGACTCTACGTGGCCGAGC ATACGACAAGTACGGATCGCTAGGACTCTACGTGGCCGAGC < 41bp 0.449850570860776 0.842671721283399 0.15754417 0.7035339 prediction 0.685343442566798 Functional Gain - DNAJC5B ENSG00000147570 CDS Human protein_coding chr8:66989032 chr8:66989033 synonymous SNV . 0 22 hPsi_associated_SNPs_23470 0 0 0 1 1 exosome 0.438718508798437 0.438209350474826 0.4070678 0 hPsi_site_17194 iPseU_CNN:0.4070678;iRNA_PseU:0 17195 chr2 131103843 131103843 1 + G A CESC 131103842 + 131103822 131103862 41 GGTCGGGCCCCGCTTTGAGCTGAAGCGTGAGTTTGAGGCTG GGTCGGGCCCCGCTTTGAGCTAAAGCGTGAGTTTGAGGCTG < 41bp 0.443947336265838 0.84266549922512 0.24777082 0.49036354 prediction 0.68533099845024 Functional Gain - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103842 chr2:131103843 synonymous SNV . 0 22 hPsi_associated_SNPs_23471 0 0 0 0 2 Ribosome 0.43871859299534 0.43871859299517 0 0 hPsi_site_17195 iPseU_CNN:0;iRNA_PseU:0 17196 chr1 246939443 246939443 1 + G A rs6665017 246939442 + 246939422 246939462 41 GTAGAACACCTTCAGAGCCTTGGCAAGCTCTCGGTCAGAGC GTAGAACACCTTCAGAGCCTTAGCAAGCTCTCGGTCAGAGC < 41bp 0.487974454129917 0.842661473286084 0.23797244 0.27376372 prediction 0.685322946572168 Functional Gain - SCCPDH;LINC01341 ENSG00000223519;ENSG00000227953 ncRNA_exonic Human other chr1:246939442 chr1:246939443 . . 0 22 hPsi_associated_SNPs_23472 0 0 1 0 0 unknown 0.438718563326307 0.438720656716161 0 0 hPsi_site_17196 iPseU_CNN:0;iRNA_PseU:0 17197 chr12 57828897 57828897 1 + G A LUSC 57828896 + 57828876 57828916 41 AGCTGCTTTGAGGACTGCACTGCAGCACCTCCACGGGGTCC AGCTGCTTTGAGGACTGCACTACAGCACCTCCACGGGGTCC < 41bp 0.44816926998945 0.842660741508162 0.32672 0.5221826 prediction 0.685321483016323 Functional Gain - INHBC ENSG00000175189 CDS Human protein_coding chr12:57828896 chr12:57828897 synonymous SNV . 0 22 hPsi_associated_SNPs_23473 0 0 0 0 1 exosome 0.438627900333288 0.438598420927902 0.0443652000000001 0 hPsi_site_17197 iPseU_CNN:0.0443652000000001;iRNA_PseU:0 17198 chr16 57416178 57416178 1 + C A UCEC 57416177 + 57416157 57416197 41 GTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGG GTAGCCTGGAGCCGACTCCTTATTCCCAGGAAGCACAGAGG < 41bp 0.494254129149218 0.842655653809239 0.29406482 0.37923306 prediction 0.685311307618477 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416177 chr16:57416178 nonsynonymous SNV 0.168 0 22 hPsi_associated_SNPs_23474 0 0 1 0 0 nucleus 0.438720816194999 0.438803656537601 0 0 hPsi_site_17198 iPseU_CNN:0;iRNA_PseU:0 17199 chr1 158576694 158576694 1 + G A SKCM 158576693 + 158576673 158576713 41 TTCCTGACTGGATACCTCTTTGGACTGGGAATGACACTAGT TTCCTGACTGGATACCTCTTTAGACTGGGAATGACACTAGT < 41bp 0.463872319398066 0.84265546391743 0.18332103 0.29569075 prediction 0.685310927834859 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576693 chr1:158576694 nonsynonymous SNV 0.865 4 22 hPsi_associated_SNPs_23475 0 0 0 0 0 unknown 0.43871859299457 0.438718652539859 0 0 hPsi_site_17199 iPseU_CNN:0;iRNA_PseU:0 17200 chr11 55587153 55587153 1 + G A SKCM 55587152 + 55587132 55587172 41 TGGGACCACGTTCACCCTCTTGGGCTTCTCAGATTACCCAG TGGGACCACGTTCACCCTCTTAGGCTTCTCAGATTACCCAG < 41bp 0.523290616868524 0.865945651166844 0.27316213 0.42853174 prediction 0.68531006859664 Functional Gain - OR5D18 ENSG00000186119 CDS Human protein_coding chr11:55587152 chr11:55587153 synonymous SNV . 0 22 hPsi_associated_SNPs_23476 0 0 0 0 0 unknown 0.438718582289579 0.438718461291178 0 0 hPsi_site_17200 iPseU_CNN:0;iRNA_PseU:0 17201 chr16 77769784 77769784 1 + G A GBM 77769783 + 77769763 77769803 41 TAAGCGTGACCCTACAGACATGGATGATGCAGCCACAGCTC TAAGCGTGACCCTACAGACATAGATGATGCAGCCACAGCTC < 41bp 0.540516585635304 0.883149201047293 0.2655061 0.3172884 prediction 0.685265230823978 Functional Gain - NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77769783 chr16:77769784 nonsynonymous SNV 0.013 0 22 hPsi_associated_SNPs_23477 0 0 0 0 2 nucleoplasm 0.438691264230869 0.438647187781556 0 0 hPsi_site_17201 iPseU_CNN:0;iRNA_PseU:0 17202 chr14 55890916 55890916 1 + C T ESCA 55890917 - 55890897 55890937 41 AGAATGGTAAAACCACGAATTGTGTTGCTTATCTTTGTATC AGAATGGTAAAACCACGAATTATGTTGCTTATCTTTGTATC < 41bp 0.538582999182429 0.881211471562324 0.4240328 0.42291945 prediction 0.68525694475979 Functional Gain - TBPL2 ENSG00000182521 CDS Human protein_coding chr14:55890917 chr14:55890916 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_23478 0 0 0 0 2 unknown 0.438725724588249 0.438730774553471 0 0 hPsi_site_17202 iPseU_CNN:0;iRNA_PseU:0 17203 chr1 151497239 151497239 1 + G A BLCA 151497238 + 151497218 151497258 41 GAGGCTGCGGGAGCGGGAGTTGACAGCCCTGAAGGGGGCCC GAGGCTGCGGGAGCGGGAGTTAACAGCCCTGAAGGGGGCCC < 41bp 0.54021524381384 0.882842661911885 0.37341723 0.73671466 prediction 0.685254836196091 Functional Gain - CGN ENSG00000143375 CDS Human protein_coding chr1:151497238 chr1:151497239 synonymous SNV . 0 22 hPsi_associated_SNPs_23479 0 0 0 0 1 exosome 0.438718592995128 0.438718593438686 0.47342932 0 hPsi_site_17203 iPseU_CNN:0.47342932;iRNA_PseU:0 17204 chr2 96686943 96686943 1 + G A rs562206443 96686942 + 96686922 96686962 41 GAGCAGCAACACCAACCAGATGGTATTCAAGACAGAGGACC GAGCAGCAACACCAACCAGATAGTATTCAAGACAGAGGACC < 41bp 0.465975958889397 0.842626347838883 0.20291474 0.31316218 prediction 0.685252695677767 Functional Gain - FAHD2CP ENSG00000231584 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:96686942 chr2:96686943 . . 0 22 hPsi_associated_SNPs_23480 0 0 0 0 2 unknown 0.438718446692443 0.438382885446824 0 0 hPsi_site_17204 iPseU_CNN:0;iRNA_PseU:0 17205 chr16 57261275 57261275 1 + G A LUAD 57261274 + 57261254 57261294 41 GAAGGCTACGGCATTGGGGATGATGAATACTCCTGTGCGTA GAAGGCTACGGCATTGGGGATAATGAATACTCCTGTGCGTA < 41bp 0.431186702944914 0.842625736229642 0.34913382 0.77956 prediction 0.685251472459284 Functional Gain - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57261274 chr16:57261275 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_23481 0 0 1 0 2 Ribosome 0.438717376049093 0.438718604885191 0.55912 0 hPsi_site_17205 iPseU_CNN:0.55912;iRNA_PseU:0 17206 chr15 81598463 81598463 1 + C A UCEC 81598462 + 81598442 81598482 41 ACCTCAACTCCTCCACTGACTCTGCAGCCTCAGCCTCTGCA ACCTCAACTCCTCCACTGACTATGCAGCCTCAGCCTCTGCA < 41bp 0.500707317722756 0.843327315127101 0.2397123 0.35023168 prediction 0.68523999480869 Functional Gain - IL16 ENSG00000172349 CDS Human protein_coding chr15:81598462 chr15:81598463 nonsynonymous SNV 0.154 3 22 hPsi_associated_SNPs_23482 0 0 0 0 1 Nucleus 0.438681916336434 0.438683131677637 0 0 hPsi_site_17206 iPseU_CNN:0;iRNA_PseU:0 17207 chr4 134073665 134073665 1 + G A COAD 134073664 + 134073644 134073684 41 CAAGTCAGACATCATGCTGGTGCAGAGCTCCAATGTACCCA CAAGTCAGACATCATGCTGGTACAGAGCTCCAATGTACCCA < 41bp 0.549395974518065 0.892011383681579 0.48596853 0.8402164 prediction 0.685230818327027 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073664 chr4:134073665 synonymous SNV . 0 22 hPsi_associated_SNPs_23483 0 0 0 0 0 cytosol 0.438718592975791 0.438718593079451 0.6804328 0 hPsi_site_17207 iPseU_CNN:0.6804328;iRNA_PseU:0 17208 chr11 134632222 134632222 1 + G A rs536554872 134632221 + 134632201 134632241 41 CCAGGCGGGGTAGCGAAGGGTGGAGTTGCACAGAGCGGCCT CCAGGCGGGGTAGCGAAGGGTAGAGTTGCACAGAGCGGCCT < 41bp 0.465495787146932 0.842610523595881 0.56267804 0.6919075 prediction 0.685221047191763 Functional Gain - LOC283177;LOC100507548 ENSG00000251226 ncRNA_exonic Human lincRNA chr11:134632221 chr11:134632222 . . 0 22 hPsi_associated_SNPs_23484 0 0 0 0 0 unknown 0.438718592736767 0.43872398936882 0.25845892 0 hPsi_site_17208 iPseU_CNN:0.25845892;iRNA_PseU:0 17209 chr7 99054115 99054115 1 + G A UCEC 99054114 + 99054094 99054134 41 GGGCACTTGGCCTTTCTCAGTGGACAGTGACAGCAGCTGGA GGGCACTTGGCCTTTCTCAGTAGACAGTGACAGCAGCTGGA < 41bp 0.447115798363842 0.842609681493546 0.23346096 0.29074097 prediction 0.685219362987092 Functional Gain - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99054114 chr7:99054115 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23485 0 0 1 0 0 chromatin 0.438720018947369 0.43872918302127 0 0 hPsi_site_17209 iPseU_CNN:0;iRNA_PseU:0 17210 chr19 10906820 10906820 1 + G A UCEC 10906819 + 10906799 10906839 41 TGAAAGAGCCCTGTCTGAAATGTGTCGACCTGGTTATCCAG TGAAAGAGCCCTGTCTGAAATATGTCGACCTGGTTATCCAG < 41bp 0.47820067045723 0.842609143611324 0.39389035 0.5038129 prediction 0.685218287222648 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10906819 chr19:10906820 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_23486 0 0 1 0 2 Nucleus 0.438718362423814 0.438718579064184 0.00762580000000002 0 hPsi_site_17210 iPseU_CNN:0.00762580000000002;iRNA_PseU:0 17211 chr15 45007682 45007682 1 + G A LUAD 45007681 + 45007661 45007701 41 GAATGGAAAGTCAAATTTCCTGAATTGCTATGTGTCTGGGT GAATGGAAAGTCAAATTTCCTAAATTGCTATGTGTCTGGGT < 41bp 0.534531076627932 0.877137678582593 0.19291162 0.31065592 prediction 0.685213203909323 Functional Gain - B2M ENSG00000166710 CDS Human protein_coding chr15:45007681 chr15:45007682 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23487 0 0 1 0 2 Ribosome 0.43871859224728 0.438725070241434 0 0 hPsi_site_17211 iPseU_CNN:0;iRNA_PseU:0 17212 chr19 38782645 38782645 1 + G A BLCA 38782644 + 38782624 38782664 41 TGAAGAACACATATGTCCTGTGACCGCCCTGTCGCCAAGAG TGAAGAACACATATGTCCTGTAACCGCCCTGTCGCCAAGAG < 41bp 0.532982251239968 0.875588169632906 0.29229513 0.514821 prediction 0.685211836785875 Functional Gain - SPINT2 ENSG00000167642 CDS Human protein_coding chr19:38782644 chr19:38782645 synonymous SNV . 0 22 hPsi_associated_SNPs_23488 0 0 1 0 0 Ribosome 0.438841167041771 0.438657896331734 0.0296419999999999 0 hPsi_site_17212 iPseU_CNN:0.0296419999999999;iRNA_PseU:0 17213 chr11 56143168 56143168 1 + G A rs370093308 56143167 + 56143147 56143187 41 CCTCACAGACCATCAGGAGTTGAAGATGCCCCTCTTTGTGC CCTCACAGACCATCAGGAGTTAAAGATGCCCCTCTTTGTGC < 41bp 0.486487745441655 0.84260203996329 0.37430716 0.5931791 prediction 0.68520407992658 Functional Gain - OR8U1;OR8U8 ENSG00000172199 CDS Human protein_coding chr11:56143167 chr11:56143168 synonymous SNV . 0 22 hPsi_associated_SNPs_23489 0 0 0 0 0 unknown 0.438718609655571 0.438717671023027 0.1863582 0 hPsi_site_17213 iPseU_CNN:0.1863582;iRNA_PseU:0 17214 chr1 26595090 26595090 1 + G A UCEC 26595089 + 26595069 26595109 41 GGAGCGCTACCTGGCTGACCTGCCCACACTGGAAGACCATC GGAGCGCTACCTGGCTGACCTACCCACACTGGAAGACCATC < 41bp 0.438490581732223 0.842600204653244 0.23779413 0.7096378 prediction 0.685200409306488 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26595089 chr1:26595090 synonymous SNV . 0 22 hPsi_associated_SNPs_23490 0 0 1 0 1 Nucleus 0.438742213885575 0.438718625721359 0.4192756 0 hPsi_site_17214 iPseU_CNN:0.4192756;iRNA_PseU:0 17215 chr15 74178487 74178487 1 + C A UCEC 74178486 + 74178466 74178506 41 GCTCAGCACCCTGATCACCTTCCTGGACCCCGTGTTTGCTG GCTCAGCACCCTGATCACCTTACTGGACCCCGTGTTTGCTG < 41bp 0.475928129892543 0.842599453328317 0.2814451 0.7867649 prediction 0.685198906656634 Functional Gain - TBC1D21 ENSG00000167139 CDS Human protein_coding chr15:74178486 chr15:74178487 nonsynonymous SNV 0.767 0 22 hPsi_associated_SNPs_23491 0 0 0 0 2 exosome 0.438718599535834 0.438715492361327 0.5735298 0 hPsi_site_17215 iPseU_CNN:0.5735298;iRNA_PseU:0 17216 chr14 36988528 36988528 1 + G A BLCA 36988527 + 36988507 36988547 41 GGACTCAAGATGTCAGACACTGAGAACGGAGTCGTGTGCTT GGACTCAAGATGTCAGACACTAAGAACGGAGTCGTGTGCTT < 41bp 0.525227615689941 0.867824553297044 0.23126787 0.31956798 prediction 0.685193875214205 Functional Gain - NKX2-1 ENSG00000136352 CDS Human protein_coding chr14:36988527 chr14:36988528 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23492 0 0 0 0 0 Endoplasmic reticulum 0.433455919818024 0.438691649922588 0 0 hPsi_site_17216 iPseU_CNN:0;iRNA_PseU:0 17217 chr5 137426261 137426261 1 + C A UCEC 137426260 + 137426240 137426280 41 GACATGCAAATGTCATGGCATCTCTGGGAGCTGCAGCATAC GACATGCAAATGTCATGGCATATCTGGGAGCTGCAGCATAC < 41bp 0.502787616327283 0.845377995781739 0.35772943 0.48783448 prediction 0.685180758908912 Functional Gain - WNT8A ENSG00000061492 CDS Human protein_coding chr5:137426260 chr5:137426261 synonymous SNV . 0 22 hPsi_associated_SNPs_23493 0 0 0 0 1 exosome 0.439318497612483 0.438836257729459 0 0 hPsi_site_17217 iPseU_CNN:0;iRNA_PseU:0 17218 chr19 3905547 3905547 1 + C A COAD 3905546 + 3905526 3905566 41 GTCCCTGCTGTCCGATGACTTCTTGGATACCCCTGATGACC GTCCCTGCTGTCCGATGACTTATTGGATACCCCTGATGACC < 41bp 0.47981803044403 0.842584503395932 0.23491588 0.38362527 prediction 0.685169006791865 Functional Gain - ATCAY ENSG00000167654 CDS Human protein_coding chr19:3905546 chr19:3905547 nonsynonymous SNV 0.957 1 22 hPsi_associated_SNPs_23494 0 0 0 0 0 nucleus 0.443237631719942 0.438721850222642 0 0 hPsi_site_17218 iPseU_CNN:0;iRNA_PseU:0 17219 chr3 46945048 46945048 1 + G A LUSC 46945047 + 46945027 46945067 41 ATGGCTGCTCCCAAGGACGATGGGTTCCTCAACGGCTCCTG ATGGCTGCTCCCAAGGACGATAGGTTCCTCAACGGCTCCTG < 41bp 0.546130297126147 0.888710806371281 0.35960406 0.41722864 prediction 0.685161018490269 Functional Gain - PTH1R ENSG00000160801 CDS Human protein_coding chr3:46945047 chr3:46945048 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_23495 0 0 0 0 0 exosome 0.438772839949782 0.438718818859221 0 0 hPsi_site_17219 iPseU_CNN:0;iRNA_PseU:0 17220 chr9 130430401 130430401 1 + G A LUSC 130430400 + 130430380 130430420 41 GGAGGCACGGGTGAAGGAGGTGCTCCTGGACGAGGACGACG GGAGGCACGGGTGAAGGAGGTACTCCTGGACGAGGACGACG < 41bp 0.422045568042861 0.842577744880836 0.31843472 0.8961122 prediction 0.685155489761672 Functional Gain - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130430400 chr9:130430401 synonymous SNV . 0 22 hPsi_associated_SNPs_23496 0 0 1 0 2 Cytosol 0.438366926698875 0.436390459046944 0.7922244 0 hPsi_site_17220 iPseU_CNN:0.7922244;iRNA_PseU:0 17221 chr17 32964708 32964708 1 + G A UCEC 32964707 + 32964687 32964727 41 GGAGATCGGCATGTACGCGCTGCTGGGCGTCTTCTGCCTCG GGAGATCGGCATGTACGCGCTACTGGGCGTCTTCTGCCTCG < 41bp 0.548914845653075 0.89149153183469 0.33914173 0.74051785 prediction 0.685153372363229 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32964707 chr17:32964708 synonymous SNV . 0 22 hPsi_associated_SNPs_23497 0 0 0 0 0 exosome 0.438125521161751 0.438412445110954 0.4810357 0 hPsi_site_17221 iPseU_CNN:0.4810357;iRNA_PseU:0 17222 chr16 88928095 88928095 1 + G A rs11864319 88928094 + 88928074 88928114 41 CGAGCCCATAGTGGCGTCAGTGCCGCCGGCGTCCTTGGGGT CGAGCCCATAGTGGCGTCAGTACCGCCGGCGTCCTTGGGGT < 41bp 0.530267206370381 0.872841723215934 0.28830874 0.48324782 prediction 0.685149033691106 Functional Gain - TRAPPC2L ENSG00000205022 CDS Human protein_coding chr16:88928094 chr16:88928095 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23498 0 0 0 0 0 Ribosome 0.438721856636763 0.438725013618117 0 0 hPsi_site_17222 iPseU_CNN:0;iRNA_PseU:0 17223 chr1 156038094 156038094 1 + G A GBM 156038093 + 156038073 156038113 41 TGCAGTGGGGGCCCTCCTGGTGTTTGACCTAACCAAGCACC TGCAGTGGGGGCCCTCCTGGTATTTGACCTAACCAAGCACC < 41bp 0.555606651227748 0.898181014411085 0.64647627 0.9160455 prediction 0.685148726366674 Functional Gain - RAB25 ENSG00000132698 CDS Human protein_coding chr1:156038093 chr1:156038094 synonymous SNV . 0 22 hPsi_associated_SNPs_23499 0 0 0 0 1 Ribosome 0.438718593186577 0.438718593183398 0.53913846 0 hPsi_site_17223 iPseU_CNN:0.53913846;iRNA_PseU:0 17224 chr3 40468888 40468888 1 + C A SKCM 40468887 + 40468867 40468907 41 CTTTGTGGGCACCCTCGCTTTCTTCACAGCGGCAGCCTTGC CTTTGTGGGCACCCTCGCTTTATTCACAGCGGCAGCCTTGC < 41bp 0.489969284001143 0.84257178005123 0.38396513 0.6295731 prediction 0.68514356010246 Functional Gain - ENTPD3 ENSG00000168032 CDS Human protein_coding chr3:40468887 chr3:40468888 nonsynonymous SNV 0.607 0 22 hPsi_associated_SNPs_23500 0 0 0 0 0 chromatin 0.438718757433899 0.438729294302643 0.2591462 0 hPsi_site_17224 iPseU_CNN:0.2591462;iRNA_PseU:0 17225 chr17 40947888 40947888 1 + G T UCEC 40947889 - 40947869 40947909 41 CAACTTGGGGTTCCTTCCCATCATCTCCTTCCTCCTCAACT CAACTTGGGGTTCCTTCCCATAATCTCCTTCCTCCTCAACT < 41bp 0.496592932320598 0.842570544884112 0.34521377 0.57585347 prediction 0.685141089768224 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947889 chr17:40947888 nonsynonymous SNV 0.964 1 22 hPsi_associated_SNPs_23501 0 0 0 0 0 chromatin 0.438718595459192 0.438718592995102 0.15170694 0 hPsi_site_17225 iPseU_CNN:0.15170694;iRNA_PseU:0 17226 chr7 6662416 6662416 1 + G A UCEC 6662415 + 6662395 6662435 41 CTCGGGCGAGCGGCCCTACGTGTGCGAGGACTGTGGCGAGC CTCGGGCGAGCGGCCCTACGTATGCGAGGACTGTGGCGAGC < 41bp 0.451057074422245 0.84257030076239 0.33523804 0.70738626 prediction 0.685140601524779 Functional Gain - ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6662415 chr7:6662416 synonymous SNV . 0 22 hPsi_associated_SNPs_23502 0 0 1 0 0 exosome 0.439210123473607 0.438882607970864 0.41477252 0 hPsi_site_17226 iPseU_CNN:0.41477252;iRNA_PseU:0 17227 chr3 154802043 154802043 1 + C A LUAD 154802042 + 154802022 154802062 41 GCGATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTGTCC GCGATGGACTCCACTGGAGATAAGCCTCTCGGTCCTTGTCC < 41bp 0.506317986807553 0.848884379289814 0.15846336 0.24661624 prediction 0.685132784964521 Functional Gain - MME ENSG00000196549 CDS Human protein_coding chr3:154802042 chr3:154802043 synonymous SNV . 0 22 hPsi_associated_SNPs_23503 0 0 0 0 2 Cytosol 0.438599045094599 0.438744082077437 0 0 hPsi_site_17227 iPseU_CNN:0;iRNA_PseU:0 17228 chr8 145095956 145095956 1 + G A SKCM 145095955 + 145095935 145095975 41 GACGAAGAGCATGATGGAGGTGGAACGGAAGCTGGCCCACC GACGAAGAGCATGATGGAGGTAGAACGGAAGCTGGCCCACC < 41bp 0.438854432016755 0.842561026877119 0.2620157 0.6057185 prediction 0.685122053754238 Functional Gain - SPATC1 ENSG00000186583 CDS Human protein_coding chr8:145095955 chr8:145095956 synonymous SNV . 0 22 hPsi_associated_SNPs_23504 0 0 0 0 1 chromatin 0.438718592982023 0.438718626289519 0.211437 0 hPsi_site_17228 iPseU_CNN:0.211437;iRNA_PseU:0 17229 chr3 52836397 52836397 1 + G A rs79449861 52836396 + 52836376 52836416 41 ACTGCTGACGGGTGTGGAGATGGAGTACCCCGAGAACGCTA ACTGCTGACGGGTGTGGAGATAGAGTACCCCGAGAACGCTA < 41bp 0.434259704385908 0.842553850358567 0.24336877 0.42953166 prediction 0.685107700717133 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836396 chr3:52836397 nonsynonymous SNV 0.246 0 22 hPsi_associated_SNPs_23505 0 0 1 0 1 cytosol 0.438718709547148 0.438718459874321 0 0 hPsi_site_17229 iPseU_CNN:0;iRNA_PseU:0 17230 chr20 17970641 17970641 1 + C A UCEC 17970640 + 17970620 17970660 41 ATCACCTGCCCACCCACATTTCATGGATGCAGAGCTCTGTT ATCACCTGCCCACCCACATTTAATGGATGCAGAGCTCTGTT < 41bp 0.500141320791971 0.842682950337782 0.30294156 0.61913055 prediction 0.68508325909162 Functional Gain - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17970640 chr20:17970641 nonsynonymous SNV 0.429 1 22 hPsi_associated_SNPs_23506 0 0 1 1 1 chromatin 0.443100450285276 0.438690373359522 0.2382611 0 hPsi_site_17230 iPseU_CNN:0.2382611;iRNA_PseU:0 17231 chr11 55595451 55595451 1 + G A LUSC 55595450 + 55595430 55595470 41 ACAGCCATCACTGTCTCCCATGGAACAATCCTTTACATTTA ACAGCCATCACTGTCTCCCATAGAACAATCCTTTACATTTA < 41bp 0.469622995904437 0.842540370687932 0.13035354 0.14856285 prediction 0.685080741375863 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595450 chr11:55595451 nonsynonymous SNV 0.670 1 22 hPsi_associated_SNPs_23507 0 0 0 0 0 unknown 0.438718592885878 0.438718613186368 0 0 hPsi_site_17231 iPseU_CNN:0;iRNA_PseU:0 17232 chr2 220439880 220439880 1 + G A UCEC 220439879 + 220439859 220439899 41 TCCTGGCCTTGGTCTCCCTCTGCTCTGCGCCTGCTGCAGAG TCCTGGCCTTGGTCTCCCTCTACTCTGCGCCTGCTGCAGAG < 41bp 0.545994051927963 0.888528107060617 0.2466079 0.66176444 prediction 0.685068110265308 Functional Gain - INHA ENSG00000123999 CDS Human protein_coding chr2:220439879 chr2:220439880 nonsynonymous SNV 0.678 5 22 hPsi_associated_SNPs_23508 0 0 0 0 0 cytosol 0.438718591174308 0.438718591703509 0.32352888 0 hPsi_site_17232 iPseU_CNN:0.32352888;iRNA_PseU:0 17233 chr1 111784948 111784948 1 + C A UCEC 111784947 + 111784927 111784967 41 TGCAACCAGGGCCCTTACCCTCTTGTCCAAGCAGTCAAGAG TGCAACCAGGGCCCTTACCCTATTGTCCAAGCAGTCAAGAG < 41bp 0.495434405035318 0.842529119590731 0.5659273 0.63115895 prediction 0.685058239181462 Functional Gain - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111784947 chr1:111784948 nonsynonymous SNV 0.781 3 22 hPsi_associated_SNPs_23509 0 0 0 0 2 exosome 0.439397679568281 0.43871587611742 0.1304633 0 hPsi_site_17233 iPseU_CNN:0.1304633;iRNA_PseU:0 Multiple complex diseases 17234 chr9 139701517 139701517 1 + C A PRAD 139701516 + 139701496 139701536 41 GAACCGGGAGGAGGATATGATCGGTACAGGCCCCGGAACTG GAACCGGGAGGAGGATATGATAGGTACAGGCCCCGGAACTG < 41bp 0.50385043129913 0.846372317752281 0.1163061 0.24051175 prediction 0.685043772906301 Functional Gain - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139701516 chr9:139701517 synonymous SNV . 0 22 hPsi_associated_SNPs_23510 0 0 1 0 2 chromatin 0.439345032834218 0.438710741013085 0 0 hPsi_site_17234 iPseU_CNN:0;iRNA_PseU:0 17235 chrX 50090716 50090716 1 + C A LUAD 50090715 + 50090695 50090735 41 ACTATGTCCAGGAGAAGGCTTCCAAGCTAGCTGCTGCCTCC ACTATGTCCAGGAGAAGGCTTACAAGCTAGCTGCTGCCTCC < 41bp 0.492335504844007 0.842513518225435 0.73897594 0.61122966 prediction 0.685027036450869 Functional Gain - CCNB3 ENSG00000147082 CDS Human protein_coding chrX:50090715 chrX:50090716 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23511 0 0 0 0 1 exosome 0.438718592989038 0.438718582078726 0 0 hPsi_site_17235 iPseU_CNN:0;iRNA_PseU:0 17236 chr3 51690036 51690036 1 + G A STAD 51690035 + 51690015 51690055 41 CCTGTGGCCAGTGTTCGTCCTGTGCAGTCCACCCCCATCCC CCTGTGGCCAGTGTTCGTCCTATGCAGTCCACCCCCATCCC < 41bp 0.420179588500683 0.842505845240303 0.29103315 0.58749855 prediction 0.685011690480606 Functional Gain - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51690035 chr3:51690036 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23512 0 0 1 0 1 chromatin 0.438639517090394 0.438661325806045 0.1749971 0 hPsi_site_17236 iPseU_CNN:0.1749971;iRNA_PseU:0 17237 chr19 14517226 14517226 1 + G A rs112374262 14517225 + 14517205 14517245 41 CTGGATGAGCCTCGAAGGCCTGGAGCTCTACTTTCTTGTGG CTGGATGAGCCTCGAAGGCCTAGAGCTCTACTTTCTTGTGG < 41bp 0.43731654631514 0.84249939549257 0.2919738 0.33234715 prediction 0.684998790985141 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14517225 chr19:14517226 synonymous SNV . 0 22 hPsi_associated_SNPs_23513 0 0 1 0 1 Cytosol 0.438718186067221 0.438718592994751 0 0 hPsi_site_17237 iPseU_CNN:0;iRNA_PseU:0 17238 chr14 67664930 67664930 1 + C A UCEC 67664929 + 67664909 67664949 41 AGGATCAATAAGCAAGATGCTCTCTGCACCCCACACTCCCA AGGATCAATAAGCAAGATGCTATCTGCACCCCACACTCCCA < 41bp 0.507423172203201 0.849919208982734 0.41314983 0.803023 prediction 0.684992073559065 Functional Gain - FAM71D ENSG00000172717 CDS Human protein_coding chr14:67664929 chr14:67664930 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23514 0 0 0 1 1 exosome 0.438640223615292 0.439742979378143 0.606046 0 hPsi_site_17238 iPseU_CNN:0.606046;iRNA_PseU:0 17239 chr7 100187894 100187894 1 + G A SKCM 100187893 + 100187873 100187913 41 TGTGCGATGGGGAAGGCGTGTGGAGACGCATCTGTCGCAGA TGTGCGATGGGGAAGGCGTGTAGAGACGCATCTGTCGCAGA < 41bp 0.553400181251699 0.895892496352026 0.30022207 0.6375505 prediction 0.684984630200655 Functional Gain - FBXO24 ENSG00000106336 CDS Human protein_coding chr7:100187893 chr7:100187894 stopgain 0.929 1 22 hPsi_associated_SNPs_23515 0 0 0 0 2 exosome 0.438797910106892 0.438687518852825 0.275101 0 hPsi_site_17239 iPseU_CNN:0.275101;iRNA_PseU:0 17240 chr10 48370980 48370980 1 + G A SARC 48370979 + 48370959 48370999 41 GCTGGCAGCAAAGTCTTCTCTGTGTGGCCCAGCGGAGCACG GCTGGCAGCAAAGTCTTCTCTATGTGGCCCAGCGGAGCACG < 41bp 0.551281592104936 0.893768150404123 0.31810743 0.33434445 prediction 0.684973116598375 Functional Gain - ZNF488 ENSG00000165388 CDS Human other chr10:48370979 chr10:48370980 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23516 0 0 0 0 0 exosome 0.438697496723968 0.438754125910314 0 0 hPsi_site_17240 iPseU_CNN:0;iRNA_PseU:0 17241 chr11 988605 988605 1 + G A UCEC 988604 + 988584 988624 41 CGTGGACCTCCTCTACGCCATGTGCGACCGCAGCAACGCCC CGTGGACCTCCTCTACGCCATATGCGACCGCAGCAACGCCC < 41bp 0.43201677167826 0.842486013972809 0.33615455 0.57520896 prediction 0.684972027945618 Functional Gain - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988604 chr11:988605 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23517 0 0 1 0 2 Nucleus 0.438768980294669 0.438719870231473 0.15041792 0 hPsi_site_17241 iPseU_CNN:0.15041792;iRNA_PseU:0 17242 chr9 115337335 115337335 1 + G A LGG 115337334 + 115337314 115337354 41 CAAACAGATCAGTATCCCCTTGTCTGCCCTGCAGCTGCCTG CAAACAGATCAGTATCCCCTTATCTGCCCTGCAGCTGCCTG < 41bp 0.540570306178178 0.883053585484943 0.30761084 0.5387048 prediction 0.684966558613529 Functional Gain - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115337334 chr9:115337335 synonymous SNV . 0 22 hPsi_associated_SNPs_23518 0 0 1 0 0 Nucleus 0.438717433454005 0.438754428853767 0.0774096 0 hPsi_site_17242 iPseU_CNN:0.0774096;iRNA_PseU:0 17243 chr3 183756159 183756159 1 + G A SKCM 183756158 + 183756138 183756178 41 AAGAAACAAGAAATTCTAGGTGGCGCCTCTGGCCCTCATGC AAGAAACAAGAAATTCTAGGTAGCGCCTCTGGCCCTCATGC < 41bp 0.44281385020727 0.842464884582415 0.21670276 0.29886013 prediction 0.684929769164829 Functional Gain - HTR3D ENSG00000186090 CDS Human protein_coding chr3:183756158 chr3:183756159 synonymous SNV . 0 22 hPsi_associated_SNPs_23519 0 0 0 0 1 unknown 0.438729436955697 0.438718608484461 0 0 hPsi_site_17243 iPseU_CNN:0;iRNA_PseU:0 17244 chrX 151818288 151818288 1 + C A BLCA 151818287 + 151818267 151818307 41 ACTGAGGAGCTGCATATCCCTCAGTTCACTTTCCTGGGAAG ACTGAGGAGCTGCATATCCCTAAGTTCACTTTCCTGGGAAG < 41bp 0.484759843069555 0.842455337910596 0.3425557 0.54032695 prediction 0.684910675821192 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151818287 chrX:151818288 nonsynonymous SNV 0.984 2 22 hPsi_associated_SNPs_23520 0 0 0 0 2 chromatin 0.438723320173425 0.438718944446339 0.0806538999999999 0 hPsi_site_17244 iPseU_CNN:0.0806538999999999;iRNA_PseU:0 17245 chr5 175722211 175722211 1 + C A SKCM 175722210 + 175722190 175722230 41 AGAAAATCTTGCTCAGTGGCTCTGAGACTGTGGATGTCCTA AGAAAATCTTGCTCAGTGGCTATGAGACTGTGGATGTCCTA < 41bp 0.508670069188754 0.851121777677022 0.20589891 0.25217667 prediction 0.684903416976537 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175722210 chr5:175722211 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_23521 0 0 0 0 1 chromatin 0.438718586580984 0.438706782527783 0 0 hPsi_site_17245 iPseU_CNN:0;iRNA_PseU:0 17246 chr16 72142768 72142768 1 + G A SKCM 72142767 + 72142747 72142787 41 CACCCCACCAGCTCCCTTTTTGGAATGGGCTACACCCCAGA CACCCCACCAGCTCCCTTTTTAGAATGGGCTACACCCCAGA < 41bp 0.555953275475243 0.898392520565151 0.34798008 0.61516404 prediction 0.684878490179816 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142767 chr16:72142768 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_23522 0 0 1 0 2 Cytosol 0.438718531130746 0.438718567833443 0.23032808 0 hPsi_site_17246 iPseU_CNN:0.23032808;iRNA_PseU:0 17247 chr9 135554356 135554356 1 + G A BLCA 135554355 + 135554335 135554375 41 TGACGGAAAGGTGAGGCAGCTGATTCCCATTTTCACAGATG TGACGGAAAGGTGAGGCAGCTAATTCCCATTTTCACAGATG < 41bp 0.535424967130591 0.877856780587536 0.29656315 0.45949045 prediction 0.68486362691389 Functional Gain - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135554355 chr9:135554356 synonymous SNV . 0 22 hPsi_associated_SNPs_23523 0 0 1 1 0 Ribosome 0.439090178783049 0.438718628542585 0 0 hPsi_site_17247 iPseU_CNN:0;iRNA_PseU:0 17248 chr4 79772148 79772148 1 + G A GBM 79772147 + 79772127 79772167 41 GTGAGAGTCAGGTTGCTATCTGTGATGGCAACTTCACCATC GTGAGAGTCAGGTTGCTATCTATGATGGCAACTTCACCATC < 41bp 0.443861109420052 0.842425284642801 0.32250243 0.44964066 prediction 0.684850569285601 Functional Gain - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79772147 chr4:79772148 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23524 0 0 1 0 2 Cytosol 0.438556490809022 0.437289011205248 0 0 hPsi_site_17248 iPseU_CNN:0;iRNA_PseU:0 17249 chr7 102105605 102105605 1 + G A COAD 102105604 + 102105584 102105624 41 GCTGGGGAAGATCCGGAGTCTGGAGTAAGAGCCGGGCAGCG GCTGGGGAAGATCCGGAGTCTAGAGTAAGAGCCGGGCAGCG < 41bp 0.47199929657485 0.842422769353367 0.29524553 0.5107822 prediction 0.684845538706734 Functional Gain - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102105604 chr7:102105605 synonymous SNV . 0 22 hPsi_associated_SNPs_23525 0 0 1 0 1 Ribosome 0.438718594904572 0.438718593249416 0.0215643999999999 0 hPsi_site_17249 iPseU_CNN:0.0215643999999999;iRNA_PseU:0 17250 chr12 131471828 131471828 1 + G A BLCA 131471827 + 131471807 131471847 41 TATGAGAACGGTGCTTTCGATGAGTTCATCATCTGGGAGCG TATGAGAACGGTGCTTTCGATAAGTTCATCATCTGGGAGCG < 41bp 0.434590095774808 0.842416521243794 0.52825606 0.8547487 prediction 0.684833042487589 Functional Gain - ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131471827 chr12:131471828 nonsynonymous SNV 0.621 4 22 hPsi_associated_SNPs_23526 0 0 0 0 1 chromatin 0.438722679007147 0.438714882630853 0.65298528 0 hPsi_site_17250 iPseU_CNN:0.65298528;iRNA_PseU:0 17251 chr14 23345193 23345193 1 + G A BLCA 23345192 + 23345172 23345212 41 GACGGCTCATGGGACTGTGCTGACGGCACAGATGAGGAGGA GACGGCTCATGGGACTGTGCTAACGGCACAGATGAGGAGGA < 41bp 0.432974418686353 0.842415184610919 0.3046654 0.7027435 prediction 0.684830369221839 Functional Gain - LRP10 ENSG00000197324 CDS Human protein_coding chr14:23345192 chr14:23345193 nonsynonymous SNV 0.958 2 22 hPsi_associated_SNPs_23527 0 0 1 0 0 Ribosome 0.438719617090829 0.438718597843101 0.405487 0 hPsi_site_17251 iPseU_CNN:0.405487;iRNA_PseU:0 17252 chr1 26796391 26796391 1 + G A rs80313266 26796390 + 26796370 26796410 41 TTCAGGGTAACAGAAGGGCCTGTAGGCCCTGGTGAACTGAA TTCAGGGTAACAGAAGGGCCTATAGGCCCTGGTGAACTGAA < 41bp 0.521025882257132 0.863439417065459 0.39388305 0.3449822 prediction 0.684827069616654 Functional Gain - DHDDS ENSG00000117682 UTR3 Human protein_coding chr1:26796390 chr1:26796391 . . 0 22 hPsi_associated_SNPs_23528 0 0 1 0 0 chromatin 0.438718526793043 0.438718583435242 0 0 hPsi_site_17252 iPseU_CNN:0;iRNA_PseU:0 17253 chr19 2210754 2210754 1 + G A BLCA 2210753 + 2210733 2210773 41 GCGCGGGCGCCCCAAGAAGATGAACACTGCGAACCCCGAGC GCGCGGGCGCCCCAAGAAGATAAACACTGCGAACCCCGAGC < 41bp 0.443187921669807 0.84241041735296 0.36034578 0.714874 prediction 0.68482083470592 Functional Gain - DOT1L ENSG00000104885 CDS Human protein_coding chr19:2210753 chr19:2210754 nonsynonymous SNV 0.692 1 22 hPsi_associated_SNPs_23529 0 0 1 0 0 Cytosol 0.438713122771719 0.438718559285604 0.429748 0 hPsi_site_17253 iPseU_CNN:0.429748;iRNA_PseU:0 17254 chr19 581522 581522 1 + G A CESC 581521 + 581501 581541 41 CCCTTCCTGGGCATCGTGGCTGAGGTGCTGGTGCTGGTCAC CCCTTCCTGGGCATCGTGGCTAAGGTGCTGGTGCTGGTCAC < 41bp 0.538428912889503 0.880832118291467 0.36773038 0.79770625 prediction 0.684806410803927 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:581521 chr19:581522 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_23530 0 0 1 3 1 Ribosome 0.438718537845586 0.438717121143852 0.5954125 0 hPsi_site_17254 iPseU_CNN:0.5954125;iRNA_PseU:0 17255 chr19 1360996 1360996 1 + G A rs200272591 1360995 + 1360975 1361015 41 CCTCTGCGGATGCAACCAGATGTCTTCCTTGCCCGGATTCC CCTCTGCGGATGCAACCAGATATCTTCCTTGCCCGGATTCC < 41bp 0.547975900587375 0.890374484701364 0.56817114 0.7616315 prediction 0.684797168227978 Functional Gain - MUM1 ENSG00000160953 CDS Human protein_coding chr19:1360995 chr19:1360996 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23531 0 0 1 0 0 Cytosol 0.439521512152198 0.438184545460157 0.38692072 0 hPsi_site_17255 iPseU_CNN:0.38692072;iRNA_PseU:0 17256 chr13 100188902 100188902 1 + G A LUAD 100188901 + 100188881 100188921 41 GTAACGTGGTGTTACGATGTTGAAGATGGTCAGAGGTTCTG GTAACGTGGTGTTACGATGTTAAAGATGGTCAGAGGTTCTG < 41bp 0.544735449505011 0.887126405655473 0.42888623 0.6440375 prediction 0.684781912300924 Functional Gain - TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100188901 chr13:100188902 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_23532 0 0 1 0 1 Nucleus 0.41782179235417 0.437866481387463 0.288075 0 hPsi_site_17256 iPseU_CNN:0.288075;iRNA_PseU:0 17257 chr17 47299967 47299967 1 + G A LUAD 47299966 + 47299946 47299986 41 GACAATGAGCTCTCCTTCTCTGAGGGCACTGTCATCTGTGT GACAATGAGCTCTCCTTCTCTAAGGGCACTGTCATCTGTGT < 41bp 0.543933296976354 0.886323293819749 0.301952 0.7168672 prediction 0.684779993686791 Functional Gain - ABI3 ENSG00000108798 CDS Human protein_coding chr17:47299966 chr17:47299967 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_23533 0 0 0 0 1 exosome 0.443709415463708 0.438754040717158 0.4337344 0 hPsi_site_17257 iPseU_CNN:0.4337344;iRNA_PseU:0 17258 chr22 19707342 19707342 1 + G A SKCM 19707341 + 19707321 19707361 41 GTGTGCAGGTGAGTCAGGCCTGGGGAAGTCCACACTGGTCC GTGTGCAGGTGAGTCAGGCCTAGGGAAGTCCACACTGGTCC < 41bp 0.445508530322474 0.842385722967753 0.20475137 0.23119709 prediction 0.684771445935507 Functional Gain - SEPT5 ENSG00000184702 CDS Human protein_coding chr22:19707341 chr22:19707342 synonymous SNV . 0 22 hPsi_associated_SNPs_23534 0 0 1 0 1 chromatin 0.438718588878929 0.439139242970233 0 0 hPsi_site_17258 iPseU_CNN:0;iRNA_PseU:0 17259 chr1 104112661 104112661 1 + G A rs563057060 104112660 + 104112640 104112680 41 AGATGGGGTCACCCACATGGTGCCCATCTATAAGGGCTACG AGATGGGGTCACCCACATGGTACCCATCTATAAGGGCTACG < 41bp 0.489507059393973 0.842378519216605 0.358127 0.8005923 prediction 0.68475703843321 Functional Gain - ACTG1P4 ENSG00000236085 ncRNA_exonic Human processed_pseudogene chr1:104112660 chr1:104112661 . . 0 22 hPsi_associated_SNPs_23535 0 0 0 0 0 unknown 0.438718549801549 0.438718553456432 0.6011846 0 hPsi_site_17259 iPseU_CNN:0.6011846;iRNA_PseU:0 17260 chr1 84880427 84880427 1 + G A rs76042396 84880426 + 84880406 84880446 41 GCACCAAAAATCGCTGGACATGTATTGGAGACCTAAATCGG GCACCAAAAATCGCTGGACATATATTGGAGACCTAAATCGG < 41bp 0.542616547126672 0.88499266214304 0.20938858 0.31874794 prediction 0.684752230032736 Functional Gain - DNASE2B ENSG00000137976 CDS Human protein_coding chr1:84880426 chr1:84880427 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_23536 0 0 0 0 0 exosome 0.438851242698676 0.439063892758514 0 0 hPsi_site_17260 iPseU_CNN:0;iRNA_PseU:0 17261 chr11 123810530 123810530 1 + G A SKCM 123810529 + 123810509 123810549 41 CTTGGGCAATCTTTCTTTCCTGGACTTTTGCTACTCTTCCA CTTGGGCAATCTTTCTTTCCTAGACTTTTGCTACTCTTCCA < 41bp 0.470815854481747 0.842374305866563 0.27354407 0.39026213 prediction 0.684748611733126 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123810529 chr11:123810530 synonymous SNV . 0 22 hPsi_associated_SNPs_23537 0 0 0 0 0 exosome 0.438800441242305 0.438718592197187 0 0 hPsi_site_17261 iPseU_CNN:0;iRNA_PseU:0 17262 chr16 29824760 29824760 1 + G A COAD 29824759 + 29824739 29824779 41 CAGGGGTCCAGGCTGGAGTCTGCAGCCCCACCTGAACCAGC CAGGGGTCCAGGCTGGAGTCTACAGCCCCACCTGAACCAGC < 41bp 0.443749227098857 0.842371709440373 0.42005187 0.7251059 prediction 0.684743418880746 Functional Gain - PRRT2 ENSG00000167371 CDS Human protein_coding chr16:29824759 chr16:29824760 nonsynonymous SNV 0.269 0 22 hPsi_associated_SNPs_23538 0 0 0 0 0 nucleoplasm 0.438810320132352 0.438797241182092 0.4502118 0 hPsi_site_17262 iPseU_CNN:0.4502118;iRNA_PseU:0 17263 chr16 50745900 50745900 1 + G A STAD 50745899 + 50745879 50745919 41 ACTGGGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGCC ACTGGGGCCTGCTGGCTGAGTACCAGACATCTGAGAAGGCC < 41bp 0.536958187427523 0.879329595617013 0.2748626 0.7678785 prediction 0.684742816378979 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50745899 chr16:50745900 nonsynonymous SNV 0.389 2 22 hPsi_associated_SNPs_23539 0 0 0 2 0 exosome 0.435886193113216 0.439371265291219 0.535757 0 hPsi_site_17263 iPseU_CNN:0.535757;iRNA_PseU:0 17264 chr5 1212557 1212557 1 + C A LUAD 1212556 + 1212536 1212576 41 CCTGGCCTGCGCATGGAGCGTCCTGTACATGTGCACCATCC CCTGGCCTGCGCATGGAGCGTACTGTACATGTGCACCATCC < 41bp 0.489310220154475 0.84236771225823 0.34293073 0.94500816 prediction 0.68473542451646 Functional Gain - SLC6A19 ENSG00000174358 CDS Human protein_coding chr5:1212556 chr5:1212557 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23540 0 0 0 0 1 cytosol 0.438718594125865 0.438718843416836 0.89001632 0 hPsi_site_17264 iPseU_CNN:0.89001632;iRNA_PseU:0 17265 chr8 94934822 94934822 1 + G A UCEC 94934821 + 94934801 94934841 41 ACTTTGCTAGAGATTGAAAATGCAGTGGAGAGCGGCCGGGC ACTTTGCTAGAGATTGAAAATACAGTGGAGAGCGGCCGGGC < 41bp 0.545706286416777 0.888072634623964 0.28862742 0.31801462 prediction 0.684732696414374 Functional Gain - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94934821 chr8:94934822 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23541 0 0 0 0 0 Ribosome 0.438718592990878 0.438718593003189 0 0 hPsi_site_17265 iPseU_CNN:0;iRNA_PseU:0 17266 chr1 22816571 22816571 1 + G A UCEC 22816570 + 22816550 22816590 41 GCTCACAAGCTTGTCCTGGCTGCTGCCAGCCTCCTGTTCAA GCTCACAAGCTTGTCCTGGCTACTGCCAGCCTCCTGTTCAA < 41bp 0.446864877922135 0.842353869507448 0.31917077 0.55470014 prediction 0.684707739014896 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22816570 chr1:22816571 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_23542 0 0 1 0 0 Nucleus 0.438718517134454 0.438715726007612 0.10940028 0 hPsi_site_17266 iPseU_CNN:0.10940028;iRNA_PseU:0 17267 chr10 5945053 5945053 1 + G A BRCA 5945052 + 5945032 5945072 41 GGCTCGGAGTCACTTGGCTGTGACCCAGCCCTTCGGTCAAA GGCTCGGAGTCACTTGGCTGTAACCCAGCCCTTCGGTCAAA < 41bp 0.438833795050198 0.842342325701347 0.22551203 0.66803485 prediction 0.684684651402693 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5945052 chr10:5945053 synonymous SNV . 0 22 hPsi_associated_SNPs_23543 0 0 1 0 2 Ribosome 0.438742126951794 0.438718520180706 0.3360697 0 hPsi_site_17267 iPseU_CNN:0.3360697;iRNA_PseU:0 17268 chr11 76507494 76507494 1 + G A BLCA 76507493 + 76507473 76507513 41 AGCTGAGGTGTTTTCAGGCCTGAGCTCCCTGCAGGAGCTGG AGCTGAGGTGTTTTCAGGCCTAAGCTCCCTGCAGGAGCTGG < 41bp 0.449111552644588 0.842342247191578 0.23749688 0.4875352 prediction 0.684684494383155 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507493 chr11:76507494 synonymous SNV . 0 22 hPsi_associated_SNPs_23544 0 0 1 0 0 Endoplasmic reticulum 0.438718596891389 0.438718592995102 0 0 hPsi_site_17268 iPseU_CNN:0;iRNA_PseU:0 17269 chr1 27100129 27100129 1 + C A UCEC 27100128 + 27100108 27100148 41 ACTGGGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAGA ACTGGGGCCCCACAGCCGAATATCATGCCTTCCAACCCAGA < 41bp 0.485837851092652 0.842341384634962 0.5275894 0.76702845 prediction 0.684682769269924 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27100128 chr1:27100129 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_23545 0 0 1 0 2 Nucleus 0.438718592995102 0.438718550455237 0.4788781 0 hPsi_site_17269 iPseU_CNN:0.4788781;iRNA_PseU:0 17270 chr3 41277892 41277892 1 + G A COAD 41277891 + 41277871 41277911 41 GAGTAGCTGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAG GAGTAGCTGCAGGGGTCCTCTATGAACTTGCTCAGGACAAG < 41bp 0.440203776454455 0.84232915365012 0.2623086 0.27013516 prediction 0.68465830730024 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41277891 chr3:41277892 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23546 0 0 1 0 2 Nucleus 0.438691145896637 0.438748854548989 0 0 hPsi_site_17270 iPseU_CNN:0;iRNA_PseU:0 17271 chr8 117950647 117950647 1 + G A STAD 117950646 + 117950626 117950666 41 GGCCCTCGCCGCCAGCCCGCTGCTGGAGGACCTCAGACGAC GGCCCTCGCCGCCAGCCCGCTACTGGAGGACCTCAGACGAC < 41bp 0.445123504659979 0.842328560080898 0.24651888 0.8810002 prediction 0.684657120161797 Functional Gain - AARD ENSG00000205002 CDS Human protein_coding chr8:117950646 chr8:117950647 synonymous SNV . 0 22 hPsi_associated_SNPs_23547 0 0 0 0 0 exosome 0.438675926587649 0.438779887464757 0.7620004 0 hPsi_site_17271 iPseU_CNN:0.7620004;iRNA_PseU:0 17272 chr5 10250483 10250483 1 + G A HNSC 10250482 + 10250462 10250502 41 ATGGGGACCCTCGCCTTCGATGAATATGGGCGCCCTTTCCT ATGGGGACCCTCGCCTTCGATAAATATGGGCGCCCTTTCCT < 41bp 0.538731305770702 0.88105982351936 0.22326168 0.42781556 prediction 0.684657035497315 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10250482 chr5:10250483 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23548 0 0 1 0 1 Cytosol 0.438712936178041 0.438718543145315 0 0 hPsi_site_17272 iPseU_CNN:0;iRNA_PseU:0 17273 chr8 144332569 144332569 1 + C A UCEC 144332568 + 144332548 144332588 41 GCCTTTGCCTACAGCTCCTGTCTCATCCGCCATCAGAAACG GCCTTTGCCTACAGCTCCTGTATCATCCGCCATCAGAAACG < 41bp 0.48957530004232 0.842323998640304 0.2467035 0.28412524 prediction 0.684647997280607 Functional Gain - ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332568 chr8:144332569 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_23549 0 0 0 0 0 chromatin 0.438718578770026 0.438710752918298 0 0 hPsi_site_17273 iPseU_CNN:0;iRNA_PseU:0 17274 chr12 81112695 81112695 1 + G A SKCM 81112694 + 81112674 81112714 41 GGATTGCTTATCCAACATAGTGGACCGGATCACCTCCTCAG GGATTGCTTATCCAACATAGTAGACCGGATCACCTCCTCAG < 41bp 0.450628975437256 0.842319511819676 0.25357634 0.6203071 prediction 0.684639023639353 Functional Gain - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81112694 chr12:81112695 synonymous SNV . 0 22 hPsi_associated_SNPs_23550 0 0 0 0 1 unknown 0.438719046756862 0.438554816516916 0.2406142 0 hPsi_site_17274 iPseU_CNN:0.2406142;iRNA_PseU:0 17275 chr10 91099122 91099122 1 + C A UCEC 91099121 + 91099101 91099141 41 TTGAAGAAGCCTTGGAAAAGTCTCCTTGCCAAACAGATGTC TTGAAGAAGCCTTGGAAAAGTATCCTTGCCAAACAGATGTC < 41bp 0.492813714178209 0.842314944715442 0.26705247 0.54146916 prediction 0.684629889430884 Functional Gain - IFIT3 ENSG00000119917 CDS Human protein_coding chr10:91099121 chr10:91099122 nonsynonymous SNV 0.033 1 22 hPsi_associated_SNPs_23551 0 0 0 0 0 exosome 0.438710793935232 0.438712650354137 0.08293832 0 hPsi_site_17275 iPseU_CNN:0.08293832;iRNA_PseU:0 17276 chr2 233406237 233406237 1 + C A HNSC 233406236 + 233406216 233406256 41 GCAGAACTGCTCCCTTATCTTCCAGTGAGGCCATTTATTGG GCAGAACTGCTCCCTTATCTTACAGTGAGGCCATTTATTGG < 41bp 0.497208442988633 0.842311885550154 0.3004524 0.65917623 prediction 0.684623771100308 Functional Gain - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233406236 chr2:233406237 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23552 0 0 0 0 1 chromatin 0.43871859299501 0.438718243516731 0.31835246 0 hPsi_site_17276 iPseU_CNN:0.31835246;iRNA_PseU:0 17277 chr21 45795835 45795835 1 + G A SKCM 45795834 + 45795814 45795854 41 GACCCACGGCCAGTACGGGGTGGAGATTCCTCTGAGGACCA GACCCACGGCCAGTACGGGGTAGAGATTCCTCTGAGGACCA < 41bp 0.437725604085563 0.842304642608805 0.31709787 0.6770519 prediction 0.684609285217611 Functional Gain - TRPM2 ENSG00000142185 CDS Human protein_coding chr21:45795834 chr21:45795835 synonymous SNV . 0 22 hPsi_associated_SNPs_23553 0 0 0 0 1 Ribosome 0.438716578464071 0.438718719107538 0.3541038 0 hPsi_site_17277 iPseU_CNN:0.3541038;iRNA_PseU:0 17278 chr5 175110779 175110779 1 + G A rs1800689 175110778 + 175110758 175110798 41 CAAAGTCCAGGTCAATGAAGTGTACGGGCTGGTGGATGGGC CAAAGTCCAGGTCAATGAAGTATACGGGCTGGTGGATGGGC < 41bp 0.541115153121956 0.883418457967077 0.34278232 0.5481724 prediction 0.684606609690241 Functional Gain - HRH2 ENSG00000113749 CDS Human protein_coding chr5:175110778 chr5:175110779 synonymous SNV . 0 22 hPsi_associated_SNPs_23554 0 0 0 0 0 nucleus 0.438763164922296 0.439452818798579 0.0963448 0 hPsi_site_17278 iPseU_CNN:0.0963448;iRNA_PseU:0 17279 chr15 42619617 42619617 1 + C A COAD 42619616 + 42619596 42619636 41 GTCAGAGAGTGGTATTCAAGTCTTTTTGCTTTCCCTGTTTA GTCAGAGAGTGGTATTCAAGTATTTTTGCTTTCCCTGTTTA < 41bp 0.489931500707234 0.84230306213216 0.20421934 0.29584125 prediction 0.684606124264321 Functional Gain - GANC ENSG00000214013 CDS Human protein_coding chr15:42619616 chr15:42619617 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23555 0 0 0 0 2 chromatin 0.438718198698574 0.4387186016686 0 0 hPsi_site_17279 iPseU_CNN:0;iRNA_PseU:0 17280 chr21 45539347 45539347 1 + G A SARC 45539346 + 45539326 45539366 41 GGGCCACTTCAACAGCATGGTGGCCCTGGCCTACTCGCCCG GGGCCACTTCAACAGCATGGTAGCCCTGGCCTACTCGCCCG < 41bp 0.433020468011077 0.842298646789436 0.13289759 0.5948116 prediction 0.684597293578872 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45539346 chr21:45539347 synonymous SNV . 0 22 hPsi_associated_SNPs_23556 0 0 1 0 2 Nucleus 0.438718580038816 0.438716376087776 0.1896232 0 hPsi_site_17280 iPseU_CNN:0.1896232;iRNA_PseU:0 17281 chr2 108622574 108622574 1 + C A LUAD 108622573 + 108622553 108622593 41 TCTTCCTCAGCCACCTATGCTCAAGTGCTGTCCTTCCTGGC TCTTCCTCAGCCACCTATGCTAAAGTGCTGTCCTTCCTGGC < 41bp 0.507451429894994 0.849744156517026 0.45882827 0.5849963 prediction 0.684585453244063 Functional Gain - SLC5A7 ENSG00000115665 CDS Human protein_coding chr2:108622573 chr2:108622574 nonsynonymous SNV 0.979 2 22 hPsi_associated_SNPs_23557 0 0 0 0 2 unknown 0.438717284119848 0.438718592101731 0.1699926 0 hPsi_site_17281 iPseU_CNN:0.1699926;iRNA_PseU:0 17282 chr20 30898384 30898384 1 + C A LUSC 30898383 + 30898363 30898403 41 ATTAAAAGAAGCTACCAAGATCAACCTCTCCCTTTCCGCTT ATTAAAAGAAGCTACCAAGATAAACCTCTCCCTTTCCGCTT < 41bp 0.507893056481318 0.850185457341231 0.44128767 0.4967477 prediction 0.684584801719825 Functional Gain - KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898383 chr20:30898384 synonymous SNV . 0 22 hPsi_associated_SNPs_23558 0 0 1 0 0 Ribosome 0.438717285886328 0.438718743499764 0 0 hPsi_site_17282 iPseU_CNN:0;iRNA_PseU:0 17283 chr14 22133586 22133586 1 + G A STAD 22133585 + 22133565 22133605 41 AGACCATTTCCTTTGACAACTGCATCACACAGCTCTTCTTC AGACCATTTCCTTTGACAACTACATCACACAGCTCTTCTTC < 41bp 0.466719556283838 0.842291255402227 0.21664676 0.32517463 prediction 0.684582510804455 Functional Gain - OR4E2 ENSG00000221977 CDS Human protein_coding chr14:22133585 chr14:22133586 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_23559 0 0 0 0 0 unknown 0.432473471843025 0.438238069994025 0 0 hPsi_site_17283 iPseU_CNN:0;iRNA_PseU:0 17284 chr20 56140758 56140758 1 + G A UCEC 56140757 + 56140737 56140777 41 GGAATTCTGGGAGAAGGAGGTGGAAGACATCGAGAAGTATC GGAATTCTGGGAGAAGGAGGTAGAAGACATCGAGAAGTATC < 41bp 0.54590345212846 0.888190811032121 0.34968624 0.90773404 prediction 0.684574717807322 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140757 chr20:56140758 synonymous SNV . 0 22 hPsi_associated_SNPs_23560 0 0 1 0 0 exosome 0.438718592991683 0.438718592561562 0.81546808 0 hPsi_site_17284 iPseU_CNN:0.81546808;iRNA_PseU:0 17285 chr7 130007770 130007770 1 + G A UCEC 130007769 + 130007749 130007789 41 CGATCTTGCCAAGGATGCGGTGGAGGCCTTGTATAAGGTCC CGATCTTGCCAAGGATGCGGTAGAGGCCTTGTATAAGGTCC < 41bp 0.444428347443392 0.842286065992288 0.34586728 0.71153945 prediction 0.684572131984575 Functional Gain - CPA5 ENSG00000158525 CDS Human protein_coding chr7:130007769 chr7:130007770 synonymous SNV . 0 22 hPsi_associated_SNPs_23561 0 0 0 0 2 exosome 0.438718592995045 0.438718593383378 0.4230789 0 hPsi_site_17285 iPseU_CNN:0.4230789;iRNA_PseU:0 17286 chr19 3586639 3586639 1 + G A DLBC 3586638 + 3586618 3586658 41 GACAGAGGATGCTCTGGGGCTGACCATCACGGACAACGGGG GACAGAGGATGCTCTGGGGCTAACCATCACGGACAACGGGG < 41bp 0.436921189788144 0.842284502768744 0.1037066 0.18997407 prediction 0.684569005537488 Functional Gain - GIPC3 ENSG00000179855 CDS Human protein_coding chr19:3586638 chr19:3586639 synonymous SNV . 0 22 hPsi_associated_SNPs_23562 0 0 0 0 1 exosome 0.439170440068922 0.437783427093393 0 0 hPsi_site_17286 iPseU_CNN:0;iRNA_PseU:0 17287 chr1 248366835 248366835 1 + G A SKCM 248366834 + 248366814 248366854 41 TGGATCCTGGGCTCTACGGATGGAATTATTGATGTTGTAGC TGGATCCTGGGCTCTACGGATAGAATTATTGATGTTGTAGC < 41bp 0.476917776831991 0.842282230016796 0.26822272 0.49377775 prediction 0.684564460033593 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248366834 chr1:248366835 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_23563 0 0 0 0 0 exosome 0.438738667698047 0.438154916104632 0 0 hPsi_site_17287 iPseU_CNN:0;iRNA_PseU:0 17288 chr20 37128131 37128131 1 + C A UCEC 37128130 + 37128110 37128150 41 GCAGAGAAGTTGATTGGTGTTCTCTTTGAGGTGTGGTTACT GCAGAGAAGTTGATTGGTGTTATCTTTGAGGTGTGGTTACT < 41bp 0.499479591519222 0.842278704772782 0.3774799 0.5189333 prediction 0.684557409545565 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37128130 chr20:37128131 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23564 0 0 1 0 1 Nucleus 0.437200820595114 0.437960261355575 0.0378666000000001 0 hPsi_site_17288 iPseU_CNN:0.0378666000000001;iRNA_PseU:0 17289 chr11 73105607 73105607 1 + G A HNSC 73105606 + 73105586 73105626 41 CAGGGCCTGGCCTCGCTCTCTGGCCCCTGCTGCTCCCGCTG CAGGGCCTGGCCTCGCTCTCTAGCCCCTGCTGCTCCCGCTG < 41bp 0.437174218438025 0.842274684052916 0.17861375 0.57016814 prediction 0.684549368105831 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73105606 chr11:73105607 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_23565 0 0 0 0 1 chromatin 0.438718769883417 0.43871866880174 0.14033628 0 hPsi_site_17289 iPseU_CNN:0.14033628;iRNA_PseU:0 17290 chr16 22092037 22092037 1 + G A UCEC 22092036 + 22092016 22092056 41 GTGATCCTTTTCTGTATGGCTGCCCTAATATTTCCAATAGG GTGATCCTTTTCTGTATGGCTACCCTAATATTTCCAATAGG < 41bp 0.47822094184335 0.842271926387498 0.2164694 0.26819447 prediction 0.684543852774996 Functional Gain - C16orf52 ENSG00000185716 CDS Human protein_coding chr16:22092036 chr16:22092037 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23566 0 0 1 0 1 Endoplasmic reticulum 0.438718592995134 0.4387185929951 0 0 hPsi_site_17290 iPseU_CNN:0;iRNA_PseU:0 17291 chr2 207027266 207027266 1 + G A LUAD 207027265 + 207027245 207027285 41 CTAGATGTGAAACCTTGGGATGATGAGACAGATATGGCGAA CTAGATGTGAAACCTTGGGATAATGAGACAGATATGGCGAA < 41bp 0.437879557794518 0.842262624155559 0.23746899 0.28020215 prediction 0.684525248311118 Functional Gain - EEF1B2 ENSG00000114942 CDS Human protein_coding chr2:207027265 chr2:207027266 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_23567 0 0 1 0 2 chromatin 0.438719033176862 0.438718557655326 0 0 hPsi_site_17291 iPseU_CNN:0;iRNA_PseU:0 17292 chr1 217915416 217915416 1 + G A rs116780033 217915415 + 217915395 217915435 41 AGATTACCAAGCCCGAAAGATGCATTACCTCCTCAGCACAA AGATTACCAAGCCCGAAAGATACATTACCTCCTCAGCACAA < 41bp 0.451475265532361 0.842262528943537 0.33972687 0.75007737 prediction 0.684525057887075 Functional Gain - SPATA17 ENSG00000162814 CDS Human protein_coding chr1:217915415 chr1:217915416 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23568 0 0 0 1 2 Cytosol 0.438718592913379 0.4387185928071 0.50015474 0 hPsi_site_17292 iPseU_CNN:0.50015474;iRNA_PseU:0 17293 chr2 231948388 231948388 1 + C A UCEC 231948387 + 231948367 231948407 41 GAAACTCAACATGAGAAGATTCTGCGTGGTCTTGCAGTTGG GAAACTCAACATGAGAAGATTATGCGTGGTCTTGCAGTTGG < 41bp 0.504979361562266 0.847235331338505 0.29573062 0.31532618 prediction 0.684511939552478 Functional Gain - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231948387 chr2:231948388 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23569 0 0 1 0 1 Nucleus 0.438555639164385 0.438430516941676 0 0 hPsi_site_17293 iPseU_CNN:0;iRNA_PseU:0 17294 chr17 80012801 80012801 1 + C A LUSC 80012800 + 80012780 80012820 41 GTCTACTTGCAGAATTGGTCTCATGTGCTCAGCTACGTCAG GTCTACTTGCAGAATTGGTCTAATGTGCTCAGCTACGTCAG < 41bp 0.482997434389565 0.842253109394147 0.2682492 0.5299461 prediction 0.684506218788294 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80012800 chr17:80012801 nonsynonymous SNV 0.966 1 22 hPsi_associated_SNPs_23570 0 0 1 0 2 Cytosol 0.438722284843714 0.438583182186317 0.0598922 0 hPsi_site_17294 iPseU_CNN:0.0598922;iRNA_PseU:0 Subclinical trait of interstitial lung disease (basilar percentage of high attenuation areas on CT scan) 17295 chrX 23398055 23398055 1 + C A UCEC 23398054 + 23398034 23398074 41 TGAGAGGTGGGAGTCCAGCTTCTGCGACACTGTCAGACTGT TGAGAGGTGGGAGTCCAGCTTATGCGACACTGTCAGACTGT < 41bp 0.486287216913713 0.842251521595591 0.2954459 0.44352484 prediction 0.684503043191182 Functional Gain - PTCHD1 ENSG00000165186 CDS Human protein_coding chrX:23398054 chrX:23398055 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23571 0 0 0 0 0 exosome 0.438638861621731 0.438715481540555 0 0 hPsi_site_17295 iPseU_CNN:0;iRNA_PseU:0 17296 chr3 128996139 128996139 1 + G A LUSC 128996138 + 128996118 128996158 41 CTTCTCTCTTCCCTTCTAGGTGTGTTCCGGGGTGGTCATGA CTTCTCTCTTCCCTTCTAGGTATGTTCCGGGGTGGTCATGA < 41bp 0.444498138994393 0.842244898371823 0.23843366 0.3528998 prediction 0.684489796743646 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128996138 chr3:128996139 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_23572 0 0 1 0 1 Nucleus 0.438718559407695 0.438718585445583 0 0 hPsi_site_17296 iPseU_CNN:0;iRNA_PseU:0 17297 chrX 47104222 47104222 1 + C A UCEC 47104221 + 47104201 47104241 41 TGGACAATTGCCTTGGCACATCTCAGTGGCCCCCAAGGCGA TGGACAATTGCCTTGGCACATATCAGTGGCCCCCAAGGCGA < 41bp 0.478971301352697 0.842243753982574 0.3082476 0.51313037 prediction 0.684487507965148 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47104221 chrX:47104222 nonsynonymous SNV 0.949 2 22 hPsi_associated_SNPs_23573 0 0 1 0 0 cytosol 0.438718592996328 0.438751096959722 0.0262607399999999 0 hPsi_site_17297 iPseU_CNN:0.0262607399999999;iRNA_PseU:0 17298 chr16 721195 721195 1 + C A rs116817154 721194 + 721174 721214 41 GGAGCTGACTGCGGACTATCTCTCCCCTCTGTGAGTGATGC GGAGCTGACTGCGGACTATCTATCCCCTCTGTGAGTGATGC < 41bp 0.504901653484006 0.847144782617763 0.3113683 0.7818163 prediction 0.684486258267515 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:721194 chr16:721195 synonymous SNV . 0 22 hPsi_associated_SNPs_23574 0 0 1 0 1 Ribosome 0.43871859299509 0.438718592956912 0.5636326 0 hPsi_site_17298 iPseU_CNN:0.5636326;iRNA_PseU:0 17299 chr11 70200458 70200458 1 + G A BLCA 70200457 + 70200437 70200477 41 GACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTC GACAAGACAACCATAAAGTGTAAAACCTCCCCGCCTTCCTC < 41bp 0.449997673177143 0.842242945940755 0.54777193 0.8408407 prediction 0.68448589188151 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70200457 chr11:70200458 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23575 0 0 1 0 1 Ribosome 0.438718427991564 0.438718592862653 0.58613754 0 hPsi_site_17299 iPseU_CNN:0.58613754;iRNA_PseU:0 17300 chr2 219232161 219232161 1 + G A SKCM 219232160 + 219232140 219232180 41 GTTCCCCACCTAGATGAGATTGAGCCACGCCCAGTGTTTGA GTTCCCCACCTAGATGAGATTAAGCCACGCCCAGTGTTTGA < 41bp 0.445265616657498 0.842240399366759 0.24382514 0.59534115 prediction 0.684480798733517 Functional Gain - CATIP ENSG00000158428 CDS Human protein_coding chr2:219232160 chr2:219232161 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_23576 0 0 0 3 2 exosome 0.439007220246837 0.438718799909946 0.1906823 0 hPsi_site_17300 iPseU_CNN:0.1906823;iRNA_PseU:0 17301 chr2 192552366 192552366 1 + G A rs117303326 192552365 + 192552345 192552385 41 GCTTCCAATCCTGGCCTCATTGTCTCCTCACCTGTGATGTT GCTTCCAATCCTGGCCTCATTATCTCCTCACCTGTGATGTT < 41bp 0.520251514452036 0.862476331562596 0.40157053 0.5636785 prediction 0.684449634221119 Functional Gain - NABP1 ENSG00000173559 UTR3 Human protein_coding chr2:192552365 chr2:192552366 . . 0 22 hPsi_associated_SNPs_23577 0 0 0 0 0 chromatin 0.438718593877906 0.438718593003388 0.127357 0 hPsi_site_17301 iPseU_CNN:0.127357;iRNA_PseU:0 17302 chr15 39875835 39875835 1 + G A SKCM 39875834 + 39875814 39875854 41 ACAGGGGGTGCTGCAGAATGTGAGGTTTGTCTTTGGAACCA ACAGGGGGTGCTGCAGAATGTAAGGTTTGTCTTTGGAACCA < 41bp 0.431451696388332 0.842220609128591 0.31921297 0.5834239 prediction 0.684441218257181 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39875834 chr15:39875835 synonymous SNV . 0 22 hPsi_associated_SNPs_23578 0 0 1 0 2 cytosol 0.438718594654922 0.43871789960934 0.1668478 0 hPsi_site_17302 iPseU_CNN:0.1668478;iRNA_PseU:0 17303 chr20 43559304 43559304 1 + G A LUAD 43559303 + 43559283 43559323 41 CCTCTCCACCATGCGGACCCTGAGCAACCCCCTCCTGGGCT CCTCTCCACCATGCGGACCCTAAGCAACCCCCTCCTGGGCT < 41bp 0.452981032942297 0.84221769536666 0.21439537 0.3931204 prediction 0.68443539073332 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43559303 chr20:43559304 synonymous SNV . 0 22 hPsi_associated_SNPs_23579 0 0 1 0 1 chromatin 0.438718582270659 0.438718592995101 0 0 hPsi_site_17303 iPseU_CNN:0;iRNA_PseU:0 17304 chr10 47087676 47087676 1 + G A LUAD 47087675 + 47087655 47087695 41 ACCATGAGGCCATCCCCATCTGCCACGGGAACCTCATCTTC ACCATGAGGCCATCCCCATCTACCACGGGAACCTCATCTTC < 41bp 0.437846645627649 0.842215482250143 0.23786822 0.56756204 prediction 0.684430964500287 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087675 chr10:47087676 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23580 0 0 0 0 0 unknown 0.438719875264412 0.438776740214875 0.13512408 0 hPsi_site_17304 iPseU_CNN:0.13512408;iRNA_PseU:0 17305 chr17 33318736 33318736 1 + C A UCEC 33318735 + 33318715 33318755 41 TCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCTGCCAAG TCTTCTTTGAGCAGAGCAAGTATTTCCCCCCAGCTGCCAAG < 41bp 0.516596751356232 0.858809070146769 0.61213154 0.69486976 prediction 0.684424637581076 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33318735 chr17:33318736 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23581 0 0 0 0 0 Cytosol 0.438718588512435 0.43871859214413 0.16547644 0 hPsi_site_17305 iPseU_CNN:0.16547644;iRNA_PseU:0 17306 chr19 50550015 50550015 1 + G A LGG 50550014 + 50549994 50550034 41 AAGCCTTCACCCAGAGCTCATGCCTTTCTATTCACCGGAGA AAGCCTTCACCCAGAGCTCATACCTTTCTATTCACCGGAGA < 41bp 0.452286210358327 0.842207636569314 0.27640697 0.7294228 prediction 0.684415273138628 Functional Gain - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50550014 chr19:50550015 nonsynonymous SNV 0.584 2 22 hPsi_associated_SNPs_23582 0 0 1 0 0 Cytosol 0.438705223026133 0.438622081635776 0.4588456 0 hPsi_site_17306 iPseU_CNN:0.4588456;iRNA_PseU:0 17307 chr1 209935926 209935926 1 + C A LUAD 209935925 + 209935905 209935945 41 CCCTCAGGCATCTGCAGGGATCTGTCTGACCACCTCTCCTC CCCTCAGGCATCTGCAGGGATATGTCTGACCACCTCTCCTC < 41bp 0.481066871548275 0.842207508475203 0.434362 0.6032652 prediction 0.684415016950406 Functional Gain - TRAF3IP3 ENSG00000009790 CDS Human protein_coding chr1:209935925 chr1:209935926 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_23583 0 0 0 0 2 exosome 0.438718596453407 0.438714905770387 0.2065304 0 hPsi_site_17307 iPseU_CNN:0.2065304;iRNA_PseU:0 17308 chr12 132636050 132636050 1 + G A LIHC 132636049 + 132636029 132636069 41 CCACCTCCCCGCCTACCTGGTGGCCGCCTTCGCCAAGCGGC CCACCTCCCCGCCTACCTGGTAGCCGCCTTCGCCAAGCGGC < 41bp 0.446638505095301 0.842201626280863 0.21395338 0.5795714 prediction 0.684403252561725 Functional Gain - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132636049 chr12:132636050 synonymous SNV . 0 22 hPsi_associated_SNPs_23584 0 0 1 0 1 Ribosome 0.438713722900024 0.438783104572131 0.1591428 0 hPsi_site_17308 iPseU_CNN:0.1591428;iRNA_PseU:0 17309 chr7 2617911 2617911 1 + G A CESC 2617910 + 2617890 2617930 41 GAAGAGCGACGTGGACCTGATGAGAACGAAGCTCCGGCGCC GAAGAGCGACGTGGACCTGATAAGAACGAAGCTCCGGCGCC < 41bp 0.55913059657177 0.901332063487027 0.25913498 0.5156609 prediction 0.684402933830516 Functional Gain - IQCE ENSG00000106012 CDS Human protein_coding chr7:2617910 chr7:2617911 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23585 0 0 0 0 2 chromatin 0.438890945953977 0.438716862103068 0.0313218 0 hPsi_site_17309 iPseU_CNN:0.0313218;iRNA_PseU:0 17310 chr8 67357536 67357536 1 + G A HNSC 67357535 + 67357515 67357555 41 GTGGCTCTACCATGGACACCTGTAAGGCTGCTAATCTGTAT GTGGCTCTACCATGGACACCTATAAGGCTGCTAATCTGTAT < 41bp 0.460814851816946 0.842200841666145 0.2241284 0.2651621 prediction 0.68440168333229 Functional Gain - ADHFE1 ENSG00000147576 CDS Human protein_coding chr8:67357535 chr8:67357536 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23586 0 0 0 7 1 cytosol 0.438721154965596 0.438718223791483 0 0 hPsi_site_17310 iPseU_CNN:0;iRNA_PseU:0 17311 chr1 162762467 162762467 1 + C A CESC 162762466 + 162762446 162762486 41 CAGTGGCATTGGCCTGGCCCTCTGCAAGCGGCTGCTGGCGG CAGTGGCATTGGCCTGGCCCTATGCAAGCGGCTGCTGGCGG < 41bp 0.485109893569673 0.842196457599157 0.2231133 0.2708496 prediction 0.684392915198313 Functional Gain - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162762466 chr1:162762467 synonymous SNV . 0 22 hPsi_associated_SNPs_23587 0 0 1 0 1 Endoplasmic reticulum 0.438718575337945 0.438611496183564 0 0 hPsi_site_17311 iPseU_CNN:0;iRNA_PseU:0 17312 chr1 154295794 154295794 1 + C A BRCA 154295793 + 154295773 154295813 41 GCCTCCATTTTTGCCACCTATCCTGCCCCCTATCTGTCCCT GCCTCCATTTTTGCCACCTATACTGCCCCCTATCTGTCCCT < 41bp 0.513401346189314 0.855586892217357 0.32314855 0.51468587 prediction 0.684371092056085 Functional Gain - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154295793 chr1:154295794 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_23588 0 0 0 0 2 Ribosome 0.43871859298544 0.438718592995102 0.02937174 0 hPsi_site_17312 iPseU_CNN:0.02937174;iRNA_PseU:0 17313 chr8 22145080 22145080 1 + G A SARC 22145079 + 22145059 22145099 41 AAGCATGAGGTTCGGCATGTTGAAGGACCATCAAGCTGTCA AAGCATGAGGTTCGGCATGTTAAAGGACCATCAAGCTGTCA < 41bp 0.42744930019915 0.842182182142746 0.33524096 0.7935389 prediction 0.684364364285491 Functional Gain - PIWIL2 ENSG00000197181 CDS Human protein_coding chr8:22145079 chr8:22145080 synonymous SNV . 0 22 hPsi_associated_SNPs_23589 0 0 0 0 2 nucleus 0.438719674508023 0.4387185930057 0.5870778 0 hPsi_site_17313 iPseU_CNN:0.5870778;iRNA_PseU:0 17314 chrX 109416526 109416526 1 + C A UCEC 109416525 + 109416505 109416545 41 TCCGGCCATCTCAGACCCATTCTACGGCCCCTGGTATCGCA TCCGGCCATCTCAGACCCATTATACGGCCCCTGGTATCGCA < 41bp 0.500981636953128 0.843162169200655 0.40713376 0.5152925 prediction 0.684361064495054 Functional Gain - TMEM164 ENSG00000157600 CDS Human protein_coding chrX:109416525 chrX:109416526 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23590 0 0 1 0 1 Endoplasmic reticulum 0.439508525755034 0.44114951891114 0.0305850000000001 0 hPsi_site_17314 iPseU_CNN:0.0305850000000001;iRNA_PseU:0 17315 chrX 73740867 73740867 1 + C A UCEC 73740866 + 73740846 73740886 41 TGGGTATGATCTTCTTCTGTTCTCCCATTGTGAGTATATTC TGGGTATGATCTTCTTCTGTTATCCCATTGTGAGTATATTC < 41bp 0.504219728515525 0.846390568318124 0.44444537 0.48743844 prediction 0.684341679605199 Functional Gain - SLC16A2 ENSG00000147100 CDS Human protein_coding chrX:73740866 chrX:73740867 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23591 0 0 0 0 1 Ribosome 0.438716700906241 0.438840932655846 0 0 hPsi_site_17315 iPseU_CNN:0;iRNA_PseU:0 17316 chr19 15807286 15807286 1 + C A SKCM 15807285 + 15807265 15807305 41 CAGAGAACAGCAAGGGGAGGTCACCTCTGGCTTTTATTCCT CAGAGAACAGCAAGGGGAGGTAACCTCTGGCTTTTATTCCT < 41bp 0.511808150020597 0.853975976924622 0.3247014 0.6822003 prediction 0.684335653808049 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807285 chr19:15807286 stopgain 0.598 0 22 hPsi_associated_SNPs_23592 0 0 1 0 2 exosome 0.438722105788454 0.438718698547942 0.3644006 0 hPsi_site_17316 iPseU_CNN:0.3644006;iRNA_PseU:0 17317 chr1 15439019 15439019 1 + C T BRCA 15439020 - 15439000 15439040 41 TACCCGGCCAGCCTTGTACTTGAGACCGCTGCTGTTCTCCT TACCCGGCCAGCCTTGTACTTAAGACCGCTGCTGTTCTCCT < 41bp 0.45458672311086 0.842152418779461 0.22361985 0.34218317 prediction 0.684304837558922 Functional Gain - KAZN ENSG00000189337 CDS Human protein_coding chr1:15439020 chr1:15439019 synonymous SNV . 0 22 hPsi_associated_SNPs_23593 0 0 0 0 0 chromatin 0.438730934915241 0.438718374103932 0 0 hPsi_site_17317 iPseU_CNN:0;iRNA_PseU:0 17318 chr9 127617996 127617996 1 + G A rs200695577 127617995 + 127617975 127618015 41 TGCACTGTCCGCCTGTGGGATGTGGCAAGAGCGAAGTGTCT TGCACTGTCCGCCTGTGGGATATGGCAAGAGCGAAGTGTCT < 41bp 0.440898214840662 0.842150751269497 0.26894745 0.3183132 prediction 0.684301502538994 Functional Gain - WDR38 ENSG00000136918 CDS Human protein_coding chr9:127617995 chr9:127617996 nonsynonymous SNV 0.052 1 22 hPsi_associated_SNPs_23594 0 0 0 0 1 nucleolus 0.438754660681496 0.438719135500558 0 0 hPsi_site_17318 iPseU_CNN:0;iRNA_PseU:0 17319 chr20 29628241 29628241 1 + G A UCEC 29628240 + 29628220 29628260 41 CACTTAGGGGAAAATGGCTTTGTTGGCCTCAAATAGCTGCT CACTTAGGGGAAAATGGCTTTATTGGCCTCAAATAGCTGCT < 41bp 0.547584550976692 0.889734489604599 0.2850814 0.46205062 prediction 0.684299877255815 Functional Gain - FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29628240 chr20:29628241 synonymous SNV . 0 22 hPsi_associated_SNPs_23595 0 0 0 0 2 unknown 0.438600352031596 0.438705437115968 0 0 hPsi_site_17319 iPseU_CNN:0;iRNA_PseU:0 17320 chr6 42902238 42902238 1 + G A SKCM 42902237 + 42902217 42902257 41 TAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAA TAAATATGTTGCTGTGGAGCTAAAGTCAGCCTTTGAGGAAA < 41bp 0.440496724503227 0.842148084699693 0.27963814 0.34105742 prediction 0.684296169399386 Functional Gain - CNPY3 ENSG00000137161 CDS Human protein_coding chr6:42902237 chr6:42902238 synonymous SNV . 0 22 hPsi_associated_SNPs_23596 0 0 1 0 1 Ribosome 0.438718826148678 0.438719275011666 0 0 hPsi_site_17320 iPseU_CNN:0;iRNA_PseU:0 17321 chr17 36873850 36873850 1 + C A UCEC 36873849 + 36873829 36873869 41 CCCTCCCCTCCTCTTCTGCTTCTATCTCCACCACTCAGGTG CCCTCCCCTCCTCTTCTGCTTATATCTCCACCACTCAGGTG < 41bp 0.483763091514047 0.842146602146872 0.56396466 0.7464955 prediction 0.684293204293744 Functional Gain - MLLT6 ENSG00000108292 CDS Human other chr17:36873849 chr17:36873850 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_23597 0 0 1 0 1 chromatin 0.438748164081684 0.43872554459714 0.36506168 0 hPsi_site_17321 iPseU_CNN:0.36506168;iRNA_PseU:0 17322 chr1 35862182 35862182 1 + G A STAD 35862181 + 35862161 35862201 41 CCAAGTCAGCCCCAGATTATTGTGGTGCCAGTTCCCGTACC CCAAGTCAGCCCCAGATTATTATGGTGCCAGTTCCCGTACC < 41bp 0.544664753075565 0.886801766666252 0.39839062 0.62515765 prediction 0.684274027181373 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35862181 chr1:35862182 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_23598 0 0 1 0 2 Cytosol 0.438718592702503 0.438718591683269 0.2503153 0 hPsi_site_17322 iPseU_CNN:0.2503153;iRNA_PseU:0 17323 chrX 47083814 47083814 1 + C A UCEC 47083813 + 47083793 47083833 41 ACGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAG ACGAGGACTTGAAGATGGGGTATGATGGGGAGAGTGACCAG < 41bp 0.521252961329741 0.86338428832205 0.23230729 0.35868484 prediction 0.684262653984618 Functional Gain - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083813 chrX:47083814 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23599 0 0 1 0 1 Ribosome 0.438748916519136 0.439131510492364 0 0 hPsi_site_17323 iPseU_CNN:0;iRNA_PseU:0 17324 chr9 2719047 2719047 1 + G A rs139581747 2719046 + 2719026 2719066 41 CTACTCTGTGGAGCACGATGTGCCCAGCACCAACTTCACTA CTACTCTGTGGAGCACGATGTACCCAGCACCAACTTCACTA < 41bp 0.453175690941928 0.842128259739635 0.27929685 0.6560165 prediction 0.68425651947927 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2719046 chr9:2719047 synonymous SNV . 0 22 hPsi_associated_SNPs_23600 0 0 0 0 1 insoluble cytoplasm 0.438732664628156 0.438723176220861 0.312033 0 hPsi_site_17324 iPseU_CNN:0.312033;iRNA_PseU:0 17325 chr7 76126696 76126696 1 + G A GBM 76126695 + 76126675 76126715 41 CAGCCATTGGACTCCCTGTGTGTCTTAGCCGCGCACCCCAG CAGCCATTGGACTCCCTGTGTATCTTAGCCGCGCACCCCAG < 41bp 0.548948705714898 0.891069954712939 0.4255408 0.6196315 prediction 0.684242497996083 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76126695 chr7:76126696 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23601 0 0 0 0 1 Nucleus 0.438718581267117 0.438718594758081 0.239263 0 hPsi_site_17325 iPseU_CNN:0.239263;iRNA_PseU:0 17326 chr10 101090505 101090505 1 + C A OV 101090504 + 101090484 101090524 41 TGCTCGACTTCGCCACTGTCTCCGAGATCCTGCGCAGCGGC TGCTCGACTTCGCCACTGTCTACGAGATCCTGCGCAGCGGC < 41bp 0.478993493719423 0.842118929739238 0.31018472 0.5267719 prediction 0.684237859478475 Functional Gain - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101090504 chr10:101090505 nonsynonymous SNV 0.912 4 22 hPsi_associated_SNPs_23602 0 0 0 0 0 cytosol 0.438723583600125 0.439655873421577 0.0535437999999999 0 hPsi_site_17326 iPseU_CNN:0.0535437999999999;iRNA_PseU:0 17327 chr16 57060140 57060140 1 + G A COAD 57060139 + 57060119 57060159 41 GACCACGCCCCAGGCCAGTCTGTGGCCCTCCTGCCCAACAT GACCACGCCCCAGGCCAGTCTATGGCCCTCCTGCCCAACAT < 41bp 0.439060313004 0.842118672894513 0.22319767 0.2660585 prediction 0.684237345789026 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57060139 chr16:57060140 nonsynonymous SNV 0.272 0 22 hPsi_associated_SNPs_23603 0 0 0 0 0 Ribosome 0.438718479643877 0.438715765298563 0 0 hPsi_site_17327 iPseU_CNN:0;iRNA_PseU:0 17328 chr12 5020664 5020664 1 + G A SKCM 5020663 + 5020643 5020683 41 CGAGTGCTGCGAGCGCGTGGTGATCAACATCTCCGGGCTGC CGAGTGCTGCGAGCGCGTGGTAATCAACATCTCCGGGCTGC < 41bp 0.448784989718031 0.842117749493337 0.18476325 0.75052726 prediction 0.684235498986673 Functional Gain - KCNA1 ENSG00000111262 CDS Human protein_coding chr12:5020663 chr12:5020664 synonymous SNV . 0 22 hPsi_associated_SNPs_23604 0 0 0 0 0 unknown 0.435568078301093 0.437845010635986 0.50105452 0 hPsi_site_17328 iPseU_CNN:0.50105452;iRNA_PseU:0 17329 chr6 42985269 42985269 1 + G A GBM 42985268 + 42985248 42985288 41 TGCCCACAGTGTCCTTGCGTTGGACAAAGCTGCCCCCGGTG TGCCCACAGTGTCCTTGCGTTAGACAAAGCTGCCCCCGGTG < 41bp 0.551052126704039 0.893168174037591 0.4500296 0.91317844 prediction 0.684232094667103 Functional Gain - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985268 chr6:42985269 stopgain 1.000 1 22 hPsi_associated_SNPs_23605 0 0 1 0 0 Ribosome 0.43874087138245 0.438718385364029 0.82635688 0 hPsi_site_17329 iPseU_CNN:0.82635688;iRNA_PseU:0 17330 chr4 52961174 52961174 1 + G A rs112535792 52961173 + 52961153 52961193 41 AATGTCAAAAGGCAATTCTGTGTATCACCCCACACAGAGAG AATGTCAAAAGGCAATTCTGTATATCACCCCACACAGAGAG < 41bp 0.471912133832041 0.842115446352136 0.42624196 0.70838606 prediction 0.684230892704272 Functional Gain - SPATA18 ENSG00000163071 UTR3 Human protein_coding chr4:52961173 chr4:52961174 . . 0 22 hPsi_associated_SNPs_23606 0 0 1 0 0 cytosol 0.438718585321198 0.438718593795067 0.41677212 0 hPsi_site_17330 iPseU_CNN:0.41677212;iRNA_PseU:0 17331 chr6 26158517 26158517 1 + G A BLCA 26158516 + 26158496 26158536 41 CCGCAAGGAGAGCTATTCAGTGTATGTGTACAAGGTGCTGA CCGCAAGGAGAGCTATTCAGTATATGTGTACAAGGTGCTGA < 41bp 0.542492493114782 0.884605898972329 0.67609143 0.77649814 prediction 0.684226811715095 Functional Gain - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158516 chr6:26158517 synonymous SNV . 0 22 hPsi_associated_SNPs_23607 0 0 1 0 0 Cytosol 0.438693955829055 0.438732043038191 0.20081342 0 hPsi_site_17331 iPseU_CNN:0.20081342;iRNA_PseU:0 17332 chr19 34263251 34263251 1 + G A SKCM 34263250 + 34263230 34263270 41 CCACGTGTCCCGTATCTTCGTGGAGGACCGCCACCGCGTGC CCACGTGTCCCGTATCTTCGTAGAGGACCGCCACCGCGTGC < 41bp 0.444822154242187 0.842112690933589 0.28085962 0.74102855 prediction 0.684225381867178 Functional Gain - CHST8 ENSG00000124302 CDS Human protein_coding chr19:34263250 chr19:34263251 synonymous SNV . 0 22 hPsi_associated_SNPs_23608 0 0 0 0 0 exosome 0.438663256358926 0.43871731972447 0.4820571 0 hPsi_site_17332 iPseU_CNN:0.4820571;iRNA_PseU:0 17333 chr22 32011217 32011217 1 + G A UCEC 32011216 + 32011196 32011236 41 CACAGGCCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTTCA CACAGGCCCGGAGCTGCTGCTACTGCCTCTTTCCTCCTTCA < 41bp 0.45608309465659 0.84210961641397 0.4251612 0.6716007 prediction 0.68421923282794 Functional Gain - SFI1 ENSG00000198089 CDS Human protein_coding chr22:32011216 chr22:32011217 synonymous SNV . 0 22 hPsi_associated_SNPs_23609 0 0 0 0 0 chromatin 0.438718690629842 0.438718903254248 0.3432014 0 hPsi_site_17333 iPseU_CNN:0.3432014;iRNA_PseU:0 17334 chr12 124102401 124102401 1 + C A BLCA 124102400 + 124102380 124102420 41 GGAAGAGTCATACATCAATTTCCTTGCAATTAACCAAAAAG GGAAGAGTCATACATCAATTTACTTGCAATTAACCAAAAAG < 41bp 0.494769632538939 0.842108425660835 0.30358708 0.71159005 prediction 0.68421685132167 Functional Gain - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124102400 chr12:124102401 nonsynonymous SNV 0.971 1 22 hPsi_associated_SNPs_23610 0 0 1 0 2 Nucleus 0.438707906370964 0.438791027534438 0.4231801 0 hPsi_site_17334 iPseU_CNN:0.4231801;iRNA_PseU:0 17335 chr10 70549601 70549601 1 + G A SKCM 70549600 + 70549580 70549620 41 GAAAACATGAATTTACAATTTGAAAACCAAATGAATAAGAC GAAAACATGAATTTACAATTTAAAAACCAAATGAATAAGAC < 41bp 0.480451685093857 0.842107104674043 0.22841457 0.29779518 prediction 0.684214209348087 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70549600 chr10:70549601 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23611 0 0 1 0 1 Nucleus 0.438638731916337 0.439014221229346 0 0 hPsi_site_17335 iPseU_CNN:0;iRNA_PseU:0 17336 chr9 113445027 113445027 1 + G A SKCM 113445026 + 113445006 113445046 41 GGCTACTTTCATGTGTGCAGTGGAATCCTACCCCCAGCCTG GGCTACTTTCATGTGTGCAGTAGAATCCTACCCCCAGCCTG < 41bp 0.441520894700861 0.842105978936335 0.291295 0.37353426 prediction 0.68421195787267 Functional Gain - MUSK ENSG00000030304 CDS Human protein_coding chr9:113445026 chr9:113445027 synonymous SNV . 0 22 hPsi_associated_SNPs_23612 0 0 0 0 2 exosome 0.438718592995104 0.438718736940511 0 0 hPsi_site_17336 iPseU_CNN:0;iRNA_PseU:0 17337 chr12 55968816 55968816 1 + G A rs184796258 55968815 + 55968795 55968835 41 TGTGGCATCTGTGACCCTGGTGGTCACTCTGGTGCTAGTGA TGTGGCATCTGTGACCCTGGTAGTCACTCTGGTGCTAGTGA < 41bp 0.472301577770885 0.84210436849573 0.25154877 0.42175984 prediction 0.684208736991459 Functional Gain - OR2AP1 ENSG00000179615 CDS Human protein_coding chr12:55968815 chr12:55968816 synonymous SNV . 0 22 hPsi_associated_SNPs_23613 0 0 0 0 0 unknown 0.438719308516953 0.438780735846817 0 0 hPsi_site_17337 iPseU_CNN:0;iRNA_PseU:0 17338 chr19 50208521 50208521 1 + C A UCEC 50208520 + 50208500 50208540 41 CTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTC CTCTGCCCAGTACGAGAAGATATTCAACACCACGCGGATTC < 41bp 0.521271628245586 0.863371643528 0.7721553 0.95508164 prediction 0.684200030564829 Functional Gain - CPT1C ENSG00000169169 CDS Human protein_coding chr19:50208520 chr19:50208521 synonymous SNV . 0 22 hPsi_associated_SNPs_23614 0 0 0 0 2 exosome 0.43871859299509 0.438718592995265 0.36585268 0 hPsi_site_17338 iPseU_CNN:0.36585268;iRNA_PseU:0 17339 chr12 108956449 108956449 1 + G A rs112552261 108956448 + 108956428 108956468 41 GCGGGCGGCATCGGCTCTGCTGCTGCGGAGCCCCCGCCTGC GCGGGCGGCATCGGCTCTGCTACTGCGGAGCCCCCGCCTGC < 41bp 0.456432796806147 0.842096320500265 0.23613614 0.7174425 prediction 0.68419264100053 Functional Gain - ISCU ENSG00000136003 CDS Human protein_coding chr12:108956448 chr12:108956449 synonymous SNV . 0 22 hPsi_associated_SNPs_23615 1 0 1 0 1 Cytosol 0.438719532688455 0.438718561672568 0.434885 0 hPsi_site_17339 iPseU_CNN:0.434885;iRNA_PseU:0 17340 chr20 37531363 37531363 1 + G A ACC 37531362 + 37531342 37531382 41 GGTGGCTCCTGAGCAGCAGATGATTGCGGACATCCACTGCA GGTGGCTCCTGAGCAGCAGATAATTGCGGACATCCACTGCA < 41bp 0.425687907774749 0.842091135993981 0.35587934 0.5633065 prediction 0.684182271987962 Functional Gain - PPP1R16B ENSG00000101445 CDS Human protein_coding chr20:37531362 chr20:37531363 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_23616 0 0 0 0 2 Cytosol 0.43863202556594 0.439860078108017 0.126613 0 hPsi_site_17340 iPseU_CNN:0.126613;iRNA_PseU:0 17341 chr1 158262029 158262029 1 + G A HNSC 158262028 + 158262008 158262048 41 TGTGGAAGTTTGGCCCAAAGTGTCTGTCATCTACTCAATCA TGTGGAAGTTTGGCCCAAAGTATCTGTCATCTACTCAATCA < 41bp 0.455562552343788 0.84209078143583 0.24853122 0.38009295 prediction 0.68418156287166 Functional Gain - CD1C ENSG00000158481 CDS Human protein_coding chr1:158262028 chr1:158262029 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_23617 0 0 0 0 0 exosome 0.438684812327828 0.438708180267755 0 0 hPsi_site_17341 iPseU_CNN:0;iRNA_PseU:0 17342 chr3 25502735 25502735 1 + C A COAD 25502734 + 25502714 25502754 41 AACTCGTCCCAAGCCCCCCATCTCCACTTCCTCCCCCTCGA AACTCGTCCCAAGCCCCCCATATCCACTTCCTCCCCCTCGA < 41bp 0.490716926307729 0.842090584299674 0.307433 0.34739947 prediction 0.684181168599348 Functional Gain - RARB ENSG00000077092 CDS Human protein_coding chr3:25502734 chr3:25502735 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_23618 0 0 1 0 2 nucleoplasm 0.438718686386794 0.438932764816271 0 0 hPsi_site_17342 iPseU_CNN:0;iRNA_PseU:0 17343 chr17 19315925 19315925 1 + G A SKCM 19315924 + 19315904 19315944 41 GTTGCGCGACCCCATCTCGCTGGACTGTGGCCACGACTTCT GTTGCGCGACCCCATCTCGCTAGACTGTGGCCACGACTTCT < 41bp 0.554369122635248 0.896453533505572 0.21082044 0.3085575 prediction 0.684168821740649 Functional Gain - RNF112 ENSG00000128482 CDS Human protein_coding chr17:19315924 chr17:19315925 synonymous SNV . 0 22 hPsi_associated_SNPs_23619 0 0 0 0 0 exosome 0.439058316639976 0.438290274865769 0 0 hPsi_site_17343 iPseU_CNN:0;iRNA_PseU:0 17344 chr1 202149453 202149453 1 + G A UCEC 202149452 + 202149432 202149472 41 GGGAGGGACTTCACCTTATTTGCCTGCCCTTCCCCAACAAA GGGAGGGACTTCACCTTATTTACCTGCCCTTCCCCAACAAA < 41bp 0.513519395819436 0.85560281858635 0.2537864 0.6533176 prediction 0.68416684553383 Functional Gain - PTPRVP ENSG00000243323 ncRNA_exonic Human processed_transcript chr1:202149452 chr1:202149453 . . 0 22 hPsi_associated_SNPs_23620 0 0 1 0 1 unknown 0.438718592995102 0.438718592995102 0.3066352 0 hPsi_site_17344 iPseU_CNN:0.3066352;iRNA_PseU:0 17345 chr8 94811895 94811895 1 + C A UCEC 94811894 + 94811874 94811914 41 TGGACTCATCTTCTAGTCTTTCTAGAAACCCACCTAGCTAC TGGACTCATCTTCTAGTCTTTATAGAAACCCACCTAGCTAC < 41bp 0.508176167973633 0.850256456257982 0.39091444 0.637773 prediction 0.684160576568697 Functional Gain - TMEM67 ENSG00000164953 CDS Human protein_coding chr8:94811894 chr8:94811895 nonsynonymous SNV 0.835 3 22 hPsi_associated_SNPs_23621 0 0 0 0 2 cytosol 0.438717822020844 0.438717945650262 0.275546 0 hPsi_site_17345 iPseU_CNN:0.275546;iRNA_PseU:0 17346 chr17 27061108 27061108 1 + G A LGG 27061107 + 27061087 27061127 41 GGCAGGCAGCCCAGAATGAGTGCCAGGTCCTCAAGCTGCTC GGCAGGCAGCCCAGAATGAGTACCAGGTCCTCAAGCTGCTC < 41bp 0.441042878151515 0.842076928109308 0.20898375 0.3504532 prediction 0.684153856218616 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27061107 chr17:27061108 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23622 0 0 1 0 1 Nucleus 0.438718502109769 0.438719111226698 0 0 hPsi_site_17346 iPseU_CNN:0;iRNA_PseU:0 17347 chr19 8436389 8436389 1 + G A ACC 8436388 + 8436368 8436408 41 ACCTCCGCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGT ACCTCCGCAGGGACAAGAACTACGCCAAGAGCCTCTCTGGT < 41bp 0.434479548587551 0.842070155587593 0.30257297 0.6725578 prediction 0.684140311175186 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436388 chr19:8436389 nonsynonymous SNV 0.967 5 22 hPsi_associated_SNPs_23623 0 0 0 0 1 Cytosol 0.438310037389362 0.438702032733445 0.3451156 0 hPsi_site_17347 iPseU_CNN:0.3451156;iRNA_PseU:0 17348 chr1 220320954 220320954 1 + G A UCEC 220320953 + 220320933 220320973 41 GATACACTGTGTCCTCGATGTGCAGAAGTTGTCAGTGGAAA GATACACTGTGTCCTCGATGTACAGAAGTTGTCAGTGGAAA < 41bp 0.537228050900928 0.879297262202888 0.27471912 0.57877064 prediction 0.68413842260392 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220320953 chr1:220320954 nonsynonymous SNV 0.582 0 22 hPsi_associated_SNPs_23624 0 0 1 0 0 Ribosome 0.438743532674418 0.438680669636335 0.15754128 0 hPsi_site_17348 iPseU_CNN:0.15754128;iRNA_PseU:0 17349 chr6 110301403 110301403 1 + G A BLCA 110301402 + 110301382 110301422 41 CCAGGTCTCCCAGCGAGGTCTGAAGGGCTCGCCCCGTGTCC CCAGGTCTCCCAGCGAGGTCTAAAGGGCTCGCCCCGTGTCC < 41bp 0.481929114112624 0.842067793557958 0.38261387 0.84985024 prediction 0.684135587115916 Functional Gain - GPR6 ENSG00000146360 CDS Human protein_coding chr6:110301402 chr6:110301403 synonymous SNV . 0 22 hPsi_associated_SNPs_23625 0 0 0 0 0 unknown 0.438718572760025 0.438718592997193 0.69970048 0 hPsi_site_17349 iPseU_CNN:0.69970048;iRNA_PseU:0 17350 chr19 17416725 17416725 1 + G A UCEC 17416724 + 17416704 17416744 41 GGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGAGTAGGT GGCTGTCTTGGCTGGATCCCTATTGGGCCCCACGAGTAGGT < 41bp 0.46797307823717 0.842065624193963 0.33253676 0.35355127 prediction 0.684131248387927 Functional Gain - MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17416724 chr19:17416725 synonymous SNV . 0 22 hPsi_associated_SNPs_23626 0 0 1 0 1 Ribosome 0.438701706474709 0.438577053670331 0 0 hPsi_site_17350 iPseU_CNN:0;iRNA_PseU:0 17351 chr12 49375418 49375418 1 + C A UCEC 49375417 + 49375397 49375437 41 ACGCGCGTACTGCACGAGTGTCTGTGAGGCGCTGCGCGGAC ACGCGCGTACTGCACGAGTGTATGTGAGGCGCTGCGCGGAC < 41bp 0.495281508334674 0.842061906233162 0.3287593 0.7875577 prediction 0.684123812466323 Functional Gain - WNT1 ENSG00000125084 CDS Human protein_coding chr12:49375417 chr12:49375418 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23627 0 0 0 0 0 exosome 0.437374673651491 0.435160410237214 0.5751154 0 hPsi_site_17351 iPseU_CNN:0.5751154;iRNA_PseU:0 17352 chr1 12853545 12853545 1 + C A LUAD 12853544 + 12853524 12853564 41 CAGACTCTGACGGTGATGGTTCAGGCCTGGCCCTTCACCTG CAGACTCTGACGGTGATGGTTAAGGCCTGGCCCTTCACCTG < 41bp 0.495178387456083 0.8420606561576 0.46906555 0.63756585 prediction 0.6841213123152 Functional Gain - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12853544 chr1:12853545 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_23628 0 0 0 0 0 unknown 0.438718434567511 0.438718592679158 0.2751317 0 hPsi_site_17352 iPseU_CNN:0.2751317;iRNA_PseU:0 17353 chr16 67233265 67233265 1 + C A KIRP 67233264 + 67233244 67233284 41 GAACGTGGTGAAGATTGCCATCAAGATGCGTGACGCCATCC GAACGTGGTGAAGATTGCCATAAAGATGCGTGACGCCATCC < 41bp 0.5056673800494 0.847726962736309 0.42659673 0.5404122 prediction 0.684119165373817 Functional Gain - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67233264 chr16:67233265 synonymous SNV . 0 22 hPsi_associated_SNPs_23629 0 0 0 0 1 Cytosol 0.438718589112324 0.43871931756496 0.0808244 0 hPsi_site_17353 iPseU_CNN:0.0808244;iRNA_PseU:0 17354 chr11 122720873 122720873 1 + C A LUAD 122720872 + 122720852 122720892 41 TCTGAGGAAGAACTCCTCCCTCCAGTGGCTGACCCCCTCAG TCTGAGGAAGAACTCCTCCCTACAGTGGCTGACCCCCTCAG < 41bp 0.488506413970922 0.842059419227534 0.3348322 0.4828539 prediction 0.684118838455067 Functional Gain - CRTAM ENSG00000109943 CDS Human protein_coding chr11:122720872 chr11:122720873 synonymous SNV . 0 22 hPsi_associated_SNPs_23630 0 0 0 0 2 exosome 0.438718593022061 0.438718587961587 0 0 hPsi_site_17354 iPseU_CNN:0;iRNA_PseU:0 17355 chr22 32480566 32480566 1 + C A OV 32480565 + 32480545 32480585 41 TCCTTCCACATCTTCCGAGATCCCCTCACGGGAGACCTCCC TCCTTCCACATCTTCCGAGATACCCTCACGGGAGACCTCCC < 41bp 0.483325849052668 0.842059155947315 0.22018108 0.4823599 prediction 0.684118311894629 Functional Gain - SLC5A1 ENSG00000100170 CDS Human protein_coding chr22:32480565 chr22:32480566 nonsynonymous SNV 0.380 3 22 hPsi_associated_SNPs_23631 0 0 0 0 1 Nucleus 0.438720593210872 0.438717024537821 0 0 hPsi_site_17355 iPseU_CNN:0;iRNA_PseU:0 17356 chr1 1269739 1269739 1 + G A rs188379812 1269738 + 1269718 1269758 41 GCCCAGGTGTTACCTGCTCATGCGGCAGCCAGGGCTCAACA GCCCAGGTGTTACCTGCTCATACGGCAGCCAGGGCTCAACA < 41bp 0.467331616699528 0.842058307816836 0.19763923 0.4289345 prediction 0.684116615633672 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269738 chr1:1269739 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_23632 0 0 0 0 0 chromatin 0.438718587507375 0.438718579393345 0 0 hPsi_site_17356 iPseU_CNN:0;iRNA_PseU:0 17357 chr11 76900487 76900487 1 + G A rs117966637 76900486 + 76900466 76900506 41 TCGTGTCTCTCTGCGTGGGCTGTTTCGCCCCCTCCGAGAAG TCGTGTCTCTCTGCGTGGGCTATTTCGCCCCCTCCGAGAAG < 41bp 0.453153418498291 0.842057651495572 0.59439284 0.7537205 prediction 0.684115302991144 Functional Gain - MYO7A ENSG00000137474 CDS Human protein_coding chr11:76900486 chr11:76900487 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_23633 1 0 0 0 2 Endoplasmic reticulum 0.438719534617528 0.438762937936446 0.31865532 0 hPsi_site_17357 iPseU_CNN:0.31865532;iRNA_PseU:0 17358 chr4 1806175 1806175 1 + G A UCEC 1806174 + 1806154 1806194 41 GGCTGTGACGCTCTGCCGCCTGCGCAGCCCCCCCAAGAAAG GGCTGTGACGCTCTGCCGCCTACGCAGCCCCCCCAAGAAAG < 41bp 0.44358092770574 0.842057326015757 0.23946813 0.34593728 prediction 0.684114652031514 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1806174 chr4:1806175 synonymous SNV . 0 22 hPsi_associated_SNPs_23634 0 0 1 0 1 Ribosome 0.438718592996054 0.438718592995092 0 0 hPsi_site_17358 iPseU_CNN:0;iRNA_PseU:0 17359 chrX 119504647 119504647 1 + C A UCEC 119504646 + 119504626 119504666 41 CTCTGCATGTACACACTATTTCTGACCATCAGTCCCTATAT CTCTGCATGTACACACTATTTATGACCATCAGTCCCTATAT < 41bp 0.511240074947638 0.853297396908611 0.3098827 0.3137532 prediction 0.684114643921945 Functional Gain - ATP1B4 ENSG00000101892 CDS Human protein_coding chrX:119504646 chrX:119504647 nonsynonymous SNV 0.895 3 22 hPsi_associated_SNPs_23635 0 0 0 0 2 Nucleus 0.438747279176086 0.438720831320719 0 0 hPsi_site_17359 iPseU_CNN:0;iRNA_PseU:0 17360 chr12 7048173 7048173 1 + C A HNSC 7048172 + 7048152 7048192 41 CAGCCCTGCGGCCTGACATGTCCTATGCTGAGCGGCTGGCA CAGCCCTGCGGCCTGACATGTACTATGCTGAGCGGCTGGCA < 41bp 0.483008830535061 0.842054645952196 0.32527196 0.8306426 prediction 0.684109291904391 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7048172 chr12:7048173 nonsynonymous SNV 0.787 3 22 hPsi_associated_SNPs_23636 0 0 1 0 0 Endoplasmic reticulum 0.438718593094593 0.438718547183742 0.6612852 0 hPsi_site_17360 iPseU_CNN:0.6612852;iRNA_PseU:0 17361 chr1 45110680 45110680 1 + G A LUSC 45110679 + 45110659 45110699 41 CATGCCAGATACACAGAGGCTGATGTCATCCCCTGCACAGG CATGCCAGATACACAGAGGCTAATGTCATCCCCTGCACAGG < 41bp 0.431493803927066 0.842047752024211 0.23886392 0.28603834 prediction 0.684095504048422 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45110679 chr1:45110680 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_23637 0 0 1 0 1 Ribosome 0.436668659859927 0.439589029760026 0 0 hPsi_site_17361 iPseU_CNN:0;iRNA_PseU:0 17362 chr17 55065065 55065065 1 + G A UCEC 55065064 + 55065044 55065084 41 CGTGGTACATAGCTCCAGGCTGCCAGTCTCCTATTTGTGGA CGTGGTACATAGCTCCAGGCTACCAGTCTCCTATTTGTGGA < 41bp 0.547034576413628 0.889080403614362 0.23231915 0.35797793 prediction 0.684091654401468 Functional Gain - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55065064 chr17:55065065 nonsynonymous SNV 0.603 2 22 hPsi_associated_SNPs_23638 0 0 1 3 1 Ribosome 0.438718599007212 0.438718653506826 0 0 hPsi_site_17362 iPseU_CNN:0;iRNA_PseU:0 17363 chr11 722496 722496 1 + C A LUAD 722495 + 722475 722515 41 CTTCCTGCGCGGCCACCTGGTCCCTAAGGAGATGTCGCTGT CTTCCTGCGCGGCCACCTGGTACCTAAGGAGATGTCGCTGT < 41bp 0.482248080655251 0.842038351290456 0.22383514 0.61271274 prediction 0.684076702580912 Functional Gain - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722495 chr11:722496 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23639 0 0 1 0 2 Cytosol 0.438718582152034 0.438718569208237 0.22542548 0 hPsi_site_17363 iPseU_CNN:0.22542548;iRNA_PseU:0 17364 chr5 149585129 149585129 1 + C A LUAD 149585128 + 149585108 149585148 41 GATGGGCCTGCTGTCCTGCCTCATGATCCCAGCTGGCATGC GATGGGCCTGCTGTCCTGCCTAATGATCCCAGCTGGCATGC < 41bp 0.503229296623087 0.845259776192141 0.23825923 0.39407742 prediction 0.684060959138107 Functional Gain - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149585128 chr5:149585129 synonymous SNV . 0 22 hPsi_associated_SNPs_23640 0 0 0 0 1 exosome 0.438717478489939 0.438718547644705 0 0 hPsi_site_17364 iPseU_CNN:0;iRNA_PseU:0 17365 chr17 45735996 45735996 1 + G A SKCM 45735995 + 45735975 45736015 41 GAATGCACTCCTGAACTCATTGGAGTTCACCAAAGCAAACT GAATGCACTCCTGAACTCATTAGAGTTCACCAAAGCAAACT < 41bp 0.439285295895909 0.842028281667846 0.16616198 0.32420743 prediction 0.684056563335692 Functional Gain - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45735995 chr17:45735996 synonymous SNV . 0 22 hPsi_associated_SNPs_23641 0 0 1 0 1 Cytosol 0.438717001501071 0.438702779611431 0 0 hPsi_site_17365 iPseU_CNN:0;iRNA_PseU:0 17366 chr17 8216332 8216332 1 + G A SKCM 8216331 + 8216311 8216351 41 TGGGTGCCTGTGGGGGGCTATGAGGAGGTCCCCAGGGTCCC TGGGTGCCTGTGGGGGGCTATAAGGAGGTCCCCAGGGTCCC < 41bp 0.441150807480929 0.842025556968877 0.439694 0.5231362 prediction 0.684051113937755 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8216331 chr17:8216332 nonsynonymous SNV 0.468 1 22 hPsi_associated_SNPs_23642 0 0 0 0 1 exosome 0.43871855056079 0.438718592995104 0.0462724000000001 0 hPsi_site_17366 iPseU_CNN:0.0462724000000001;iRNA_PseU:0 17367 chr5 140626769 140626769 1 + G A HNSC 140626768 + 140626748 140626788 41 AGACCGCGGCTTCCCGGCGCTGAGCAGCGAGGCGCTGGTGC AGACCGCGGCTTCCCGGCGCTAAGCAGCGAGGCGCTGGTGC < 41bp 0.44637496840723 0.842014460193555 0.2580995 0.40489784 prediction 0.684028920387109 Functional Gain - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140626768 chr5:140626769 synonymous SNV . 0 22 hPsi_associated_SNPs_23643 0 0 0 0 0 exosome 0.438718249389161 0.438720746286036 0 0 hPsi_site_17367 iPseU_CNN:0;iRNA_PseU:0 17368 chr19 1106556 1106556 1 + G A rs569667691 1106555 + 1106535 1106575 41 ACAGGTGATAGAGAAGGACCTGCCCCACTATTTCTAGCTCC ACAGGTGATAGAGAAGGACCTACCCCACTATTTCTAGCTCC < 41bp 0.53799980262156 0.880013686299686 0.2029686 0.32016498 prediction 0.684027767356253 Functional Gain - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1106555 chr19:1106556 unknown 0.960 0 22 hPsi_associated_SNPs_23644 0 0 1 0 1 Cytosol 0.43871859292396 0.438718591127133 0 0 hPsi_site_17368 iPseU_CNN:0;iRNA_PseU:0 17369 chr5 177035571 177035571 1 + G A SKCM 177035570 + 177035550 177035590 41 TGTCCAACCGCTTCTGGGGCTGGGGCCGCGAGGACGACGAG TGTCCAACCGCTTCTGGGGCTAGGGCCGCGAGGACGACGAG < 41bp 0.552455407255654 0.894467753976708 0.24741495 0.52531344 prediction 0.684024693442106 Functional Gain - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177035570 chr5:177035571 stopgain 1.000 1 22 hPsi_associated_SNPs_23645 0 0 1 0 2 Ribosome 0.438414091126527 0.438506234723318 0.05062688 0 hPsi_site_17369 iPseU_CNN:0.05062688;iRNA_PseU:0 17370 chrX 69498415 69498415 1 + G A UCEC 69498414 + 69498394 69498434 41 GCAGTAACCCCAATCCTGGCTGCCAGCTGCCAGAAACGGGG GCAGTAACCCCAATCCTGGCTACCAGCTGCCAGAAACGGGG < 41bp 0.430518157999209 0.842009567019286 0.13511035 0.2545802 prediction 0.684019134038571 Functional Gain - ARR3 ENSG00000120500 CDS Human protein_coding chrX:69498414 chrX:69498415 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_23646 0 0 0 0 2 Cytosol 0.438717253610578 0.438716504734981 0 0 hPsi_site_17370 iPseU_CNN:0;iRNA_PseU:0 17371 chr3 47456625 47456625 1 + C T KIRP 47456626 - 47456606 47456646 41 TTCCCTTGATTTCTTCTCCTTGGAGACCCACACTGCCCTCA TTCCCTTGATTTCTTCTCCTTAGAGACCCACACTGCCCTCA < 41bp 0.554052187776324 0.896061560259424 0.25248235 0.33437783 prediction 0.6840187449662 Functional Gain - SCAP ENSG00000114650 CDS Human protein_coding chr3:47456626 chr3:47456625 synonymous SNV . 0 22 hPsi_associated_SNPs_23647 0 0 1 0 2 Cytosol 0.438718604232869 0.439187676372388 0 0 hPsi_site_17371 iPseU_CNN:0;iRNA_PseU:0 17372 chr12 123875268 123875268 1 + C A SKCM 123875267 + 123875247 123875287 41 TCCCCCTTCAGGAAGAGAACTCAGTTACACATCACGAAGTC TCCCCCTTCAGGAAGAGAACTAAGTTACACATCACGAAGTC < 41bp 0.487657250658009 0.84200790645869 0.19672582 0.29616562 prediction 0.684015812917379 Functional Gain - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123875267 chr12:123875268 stopgain 1.000 1 22 hPsi_associated_SNPs_23648 0 0 1 0 2 Cytosol 0.438720894947096 0.438719039091836 0 0 hPsi_site_17372 iPseU_CNN:0;iRNA_PseU:0 17373 chr3 133475720 133475720 1 + G A UCEC 133475719 + 133475699 133475739 41 GGGACCAGTATGAGCTGCTTTGCCTGGACAACACCCGGAAG GGGACCAGTATGAGCTGCTTTACCTGGACAACACCCGGAAG < 41bp 0.435204079395093 0.842003642754328 0.24251771 0.43824622 prediction 0.684007285508656 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133475719 chr3:133475720 nonsynonymous SNV 0.979 4 22 hPsi_associated_SNPs_23649 0 0 1 0 1 Cytosol 0.438718592995951 0.438718592995102 0 0 hPsi_site_17373 iPseU_CNN:0;iRNA_PseU:0 17374 chr1 92595302 92595302 1 + G A HNSC 92595301 + 92595281 92595321 41 ATGCTGAGTGGCTGTTGGGCTGAAAGCTCCCAAGAGTACGT ATGCTGAGTGGCTGTTGGGCTAAAAGCTCCCAAGAGTACGT < 41bp 0.537597370737562 0.879600129868182 0.42249992 0.5587703 prediction 0.684005518261241 Functional Gain - BTBD8 ENSG00000189195 CDS Human protein_coding chr1:92595301 chr1:92595302 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23650 0 0 1 0 1 cytosol 0.438716141020711 0.438718437839543 0.1175406 0 hPsi_site_17374 iPseU_CNN:0.1175406;iRNA_PseU:0 17375 chr6 107955303 107955303 1 + G A LUAD 107955302 + 107955282 107955322 41 ATCCGCGGGCCTCCGCACCATGCCTCCAACCCCAACAGCCC ATCCGCGGGCCTCCGCACCATACCTCCAACCCCAACAGCCC < 41bp 0.428291647331808 0.841999403624416 0.25490272 0.8216735 prediction 0.683998807248832 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107955302 chr6:107955303 nonsynonymous SNV 0.932 1 22 hPsi_associated_SNPs_23651 0 0 1 0 0 cytosol 0.438718592995104 0.438718592995097 0.643347 0 hPsi_site_17375 iPseU_CNN:0.643347;iRNA_PseU:0 17376 chr14 91647608 91647608 1 + G A CESC 91647607 + 91647587 91647627 41 ATGCAAAGGCTCCACCTGGTTGTCTCACCCCAGAGAGAATT ATGCAAAGGCTCCACCTGGTTATCTCACCCCAGAGAGAATT < 41bp 0.548196664907392 0.890195217020123 0.5519843 0.89683294 prediction 0.683997104225464 Functional Gain - C14orf159 ENSG00000133943 CDS Human protein_coding chr14:91647607 chr14:91647608 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_23652 0 0 1 2 1 chromatin 0.439209820779757 0.438737916318413 0.68969728 0 hPsi_site_17376 iPseU_CNN:0.68969728;iRNA_PseU:0 17377 chr11 117152649 117152649 1 + C A COAD 117152648 + 117152628 117152668 41 GTGTTTCAACCCAGTCCCTCTCTGGCTCCTCGGATGCCCTT GTGTTTCAACCCAGTCCCTCTATGGCTCCTCGGATGCCCTT < 41bp 0.522903926480192 0.864902367843508 0.3035702 0.4717353 prediction 0.683996882726633 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152648 chr11:117152649 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23653 0 0 1 0 1 chromatin 0.438719735053298 0.438748216388267 0 0 hPsi_site_17377 iPseU_CNN:0;iRNA_PseU:0 17378 chr12 50500685 50500685 1 + C A OV 50500684 + 50500664 50500704 41 AGAGGTGGACACAGTAGAGATCTGTGGAGCCTTAAAGGTGA AGAGGTGGACACAGTAGAGATATGTGGAGCCTTAAAGGTGA < 41bp 0.483504772363681 0.841992150029362 0.337335 0.53043085 prediction 0.683984300058724 Functional Gain - GPD1 ENSG00000167588 CDS Human protein_coding chr12:50500684 chr12:50500685 synonymous SNV . 0 22 hPsi_associated_SNPs_23654 0 0 1 0 2 Cytosol 0.438718597642221 0.43871859348326 0.0608617 0 hPsi_site_17378 iPseU_CNN:0.0608617;iRNA_PseU:0 17379 chr13 53624273 53624273 1 + G A STAD 53624272 + 53624252 53624292 41 GAATACAGATGGGAGACTGTTGGAGTATTATAGACTGTACA GAATACAGATGGGAGACTGTTAGAGTATTATAGACTGTACA < 41bp 0.453830336382013 0.841992001604738 0.24997133 0.3881508 prediction 0.683984003209476 Functional Gain - OLFM4 ENSG00000102837 CDS Human protein_coding chr13:53624272 chr13:53624273 synonymous SNV . 0 22 hPsi_associated_SNPs_23655 0 0 0 0 0 exosome 0.438718609806357 0.438718036053882 0 0 hPsi_site_17379 iPseU_CNN:0;iRNA_PseU:0 17380 chr3 101298789 101298789 1 + G A UCEC 101298788 + 101298768 101298808 41 AAGATCTCCAAGTTTGGATTTGCCATAGGTAGTCAGACGAC AAGATCTCCAAGTTTGGATTTACCATAGGTAGTCAGACGAC < 41bp 0.541968604151218 0.883960238522121 0.25974804 0.46925047 prediction 0.683983268741807 Functional Gain - PCNP ENSG00000081154 CDS Human protein_coding chr3:101298788 chr3:101298789 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_23656 0 0 1 0 0 chromatin 0.438714951244098 0.438772564464795 0 0 hPsi_site_17380 iPseU_CNN:0;iRNA_PseU:0 17381 chr8 110131592 110131592 1 + G A SKCM 110131591 + 110131571 110131611 41 CATTTCAGCACAGAGCTTGATGATATCACTGTCACTGACAC CATTTCAGCACAGAGCTTGATAATATCACTGTCACTGACAC < 41bp 0.533013867886802 0.875001989936737 0.15225264 0.18177694 prediction 0.683976244099868 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110131591 chr8:110131592 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_23657 0 0 0 0 0 exosome 0.438819767732149 0.43977110175112 0 0 hPsi_site_17381 iPseU_CNN:0;iRNA_PseU:0 17382 chrX 41332928 41332928 1 + G A rs12013709 41332927 + 41332907 41332947 41 CGACCTGGACCGGAACGGCCTGCGCTTCCTGGGCGAGCGAG CGACCTGGACCGGAACGGCCTACGCTTCCTGGGCGAGCGAG < 41bp 0.454853454916859 0.8419878937972 0.32843333 0.72885895 prediction 0.683975787594399 Functional Gain - NYX ENSG00000188937 CDS Human protein_coding chrX:41332927 chrX:41332928 synonymous SNV . 0 22 hPsi_associated_SNPs_23658 0 0 0 0 0 unknown 0.438719192128403 0.438260647455399 0.4577179 0 hPsi_site_17382 iPseU_CNN:0.4577179;iRNA_PseU:0 17383 chr14 24634077 24634077 1 + G A COAD 24634076 + 24634056 24634096 41 CCCATCCCCATCTCCTGGAATGCACCCCAGGCTCCACCTGG CCCATCCCCATCTCCTGGAATACACCCCAGGCTCCACCTGG < 41bp 0.442775184043718 0.841987434345561 0.39635068 0.75844944 prediction 0.683974868691122 Functional Gain - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24634076 chr14:24634077 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_23659 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592995124 0.51689888 0 hPsi_site_17383 iPseU_CNN:0.51689888;iRNA_PseU:0 17384 chr19 50436715 50436715 1 + G A rs3170545 50436714 + 50436694 50436734 41 AAATGTTTGGCCTTAGTCAATGTCTATGCCCGTCACATAAC AAATGTTTGGCCTTAGTCAATATCTATGCCCGTCACATAAC < 41bp 0.517443299739344 0.859422281496611 0.35491 0.7268015 prediction 0.683957963514533 Functional Gain - ATF5 ENSG00000169136 UTR3 Human protein_coding chr19:50436714 chr19:50436715 . . 0 22 hPsi_associated_SNPs_23660 0 0 1 1 0 Cytosol 0.438718910910209 0.438718108394701 0.453603 0 hPsi_site_17384 iPseU_CNN:0.453603;iRNA_PseU:0 17385 chr1 152732429 152732429 1 + G A UCEC 152732428 + 152732408 152732448 41 CTGAGGTGTCCTACGTGCAGTGCGAAGCGTCACAACCTGTT CTGAGGTGTCCTACGTGCAGTACGAAGCGTCACAACCTGTT < 41bp 0.442123888453704 0.841973889250292 0.413046 0.70994496 prediction 0.683947778500585 Functional Gain - KPRP ENSG00000203786 CDS Human protein_coding chr1:152732428 chr1:152732429 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23661 0 0 0 0 0 exosome 0.438439592681467 0.438544318175595 0.41988992 0 hPsi_site_17385 iPseU_CNN:0.41988992;iRNA_PseU:0 17386 chr16 67208108 67208108 1 + C A UCEC 67208107 + 67208087 67208127 41 GGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCC GGAGCGGCCGTCAGAGACTATAGACCGCGAGCGGAAACGCC < 41bp 0.484056437074428 0.841969462567444 0.23663962 0.38675708 prediction 0.683938925134889 Functional Gain - NOL3 ENSG00000140939 CDS Human protein_coding chr16:67208107 chr16:67208108 synonymous SNV . 0 22 hPsi_associated_SNPs_23662 0 0 0 0 1 Ribosome 0.438701255836974 0.43871843946936 0 0 hPsi_site_17386 iPseU_CNN:0;iRNA_PseU:0 17387 chr11 67075182 67075182 1 + G A UCEC 67075181 + 67075161 67075201 41 TATGGCCGACCTGGAGTCTCTGCGGCCTCCCAGCGCCGAGC TATGGCCGACCTGGAGTCTCTACGGCCTCCCAGCGCCGAGC < 41bp 0.553545126660635 0.895505426275628 0.4564611 0.65003157 prediction 0.683920599229986 Functional Gain - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075181 chr11:67075182 synonymous SNV . 0 22 hPsi_associated_SNPs_23663 0 0 1 0 1 nucleus 0.438718590351382 0.438718506498457 0.30006314 0 hPsi_site_17387 iPseU_CNN:0.30006314;iRNA_PseU:0 17388 chr16 30666894 30666894 1 + G A HNSC 30666893 + 30666873 30666913 41 TCAGCTAAACCTTACACCAATGGGACTGCCTCGACCAATCA TCAGCTAAACCTTACACCAATAGGACTGCCTCGACCAATCA < 41bp 0.441652381298368 0.841959954945975 0.13875994 0.17601931 prediction 0.683919909891951 Functional Gain - PRR14 ENSG00000156858 CDS Human protein_coding chr16:30666893 chr16:30666894 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23664 0 0 1 0 2 Cytosol 0.438713686600298 0.438717475359266 0 0 hPsi_site_17388 iPseU_CNN:0;iRNA_PseU:0 17389 chr9 35792895 35792895 1 + G A UCEC 35792894 + 35792874 35792914 41 CACGGGCACTTCAATTGGACTGCCCGTGCTGCCTTGCTGTA CACGGGCACTTCAATTGGACTACCCGTGCTGCCTTGCTGTA < 41bp 0.441094946842218 0.84195706502165 0.16341907 0.465381 prediction 0.6839141300433 Functional Gain - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792894 chr9:35792895 nonsynonymous SNV 0.802 1 22 hPsi_associated_SNPs_23665 0 0 0 0 0 chromatin 0.438718306745082 0.438692964213365 0 0 hPsi_site_17389 iPseU_CNN:0;iRNA_PseU:0 17390 chr17 61611475 61611475 1 + G A rs115048320 61611474 + 61611454 61611494 41 TATACCTGCAGTCCCCTCACTGTGGTGGATCTCATCGTGGA TATACCTGCAGTCCCCTCACTATGGTGGATCTCATCGTGGA < 41bp 0.422974307752242 0.841956710324348 0.59675324 0.86821306 prediction 0.683913420648696 Functional Gain - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61611474 chr17:61611475 nonsynonymous SNV 0.941 3 22 hPsi_associated_SNPs_23666 0 0 0 0 0 unknown 0.438703530342972 0.438715460697892 0.54291964 0 hPsi_site_17390 iPseU_CNN:0.54291964;iRNA_PseU:0 17391 chr2 233409265 233409265 1 + G A LUSC 233409264 + 233409244 233409284 41 GCAGTGGCAGCGGCAAGGGCTGGTGGCGGCAGCGCTGGAGA GCAGTGGCAGCGGCAAGGGCTAGTGGCGGCAGCGCTGGAGA < 41bp 0.431005689460543 0.841956374809241 0.16830894 0.49157676 prediction 0.683912749618481 Functional Gain - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233409264 chr2:233409265 synonymous SNV . 0 22 hPsi_associated_SNPs_23667 0 0 0 0 1 chromatin 0.43872003537046 0.438718837398561 0 0 hPsi_site_17391 iPseU_CNN:0;iRNA_PseU:0 17392 chr15 41106207 41106207 1 + G A BLCA 41106206 + 41106186 41106226 41 CCCTGGTGCTGCATCTGCAATGAGGATGCCACCCTACGCTG CCCTGGTGCTGCATCTGCAATAAGGATGCCACCCTACGCTG < 41bp 0.486590267003254 0.841956231594582 0.30921367 0.41267833 prediction 0.683912463189164 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41106206 chr15:41106207 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23668 0 0 0 0 2 Ribosome 0.438718276090942 0.438718918500226 0 0 hPsi_site_17392 iPseU_CNN:0;iRNA_PseU:0 17393 chr7 150558060 150558060 1 + C A LUAD 150558059 + 150558039 150558079 41 GGCCTGGGTGACGGTGGGCTTCCTGCACATCCCCCACTCAG GGCCTGGGTGACGGTGGGCTTACTGCACATCCCCCACTCAG < 41bp 0.515309181235257 0.857260169095299 0.2966023 0.79712296 prediction 0.683901975720084 Functional Gain - AOC1 ENSG00000002726 CDS Human protein_coding chr7:150558059 chr7:150558060 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_23669 0 0 0 0 1 exosome 0.43871854818801 0.438732226760752 0.59424592 0 hPsi_site_17393 iPseU_CNN:0.59424592;iRNA_PseU:0 17394 chr9 124083609 124083609 1 + G A BLCA 124083608 + 124083588 124083628 41 GCCACATATGGACAGTTCTATGGAGGCGACAGCTACATCAT GCCACATATGGACAGTTCTATAGAGGCGACAGCTACATCAT < 41bp 0.443502197203456 0.841939300662023 0.27022165 0.5669945 prediction 0.683878601324046 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124083608 chr9:124083609 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_23670 0 0 1 0 2 Cytosol 0.462202271775009 0.434804648607738 0.133989 0 hPsi_site_17394 iPseU_CNN:0.133989;iRNA_PseU:0 17395 chr19 37975446 37975446 1 + C A SARC 37975445 + 37975425 37975465 41 CCTTACGAATGTAAGGTATGTCGAAAAGCCTTCAGCCAGTT CCTTACGAATGTAAGGTATGTAGAAAAGCCTTCAGCCAGTT < 41bp 0.489413457059331 0.841934249287381 0.21559736 0.4583866 prediction 0.683868498574762 Functional Gain - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37975445 chr19:37975446 synonymous SNV . 0 22 hPsi_associated_SNPs_23671 0 0 0 0 0 exosome 0.438718592995366 0.438718594671488 0 0 hPsi_site_17395 iPseU_CNN:0;iRNA_PseU:0 17396 chr15 25213164 25213164 1 + G A CESC 25213163 + 25213143 25213183 41 CTGAGGCAGGCATTCTTAGCTGAGACACCAAGAGGTGGTTA CTGAGGCAGGCATTCTTAGCTAAGACACCAAGAGGTGGTTA < 41bp 0.44761882005844 0.841931547970833 0.28557763 0.33021307 prediction 0.683863095941666 Functional Gain - SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213163 chr15:25213164 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23672 0 0 0 0 2 cytosol 0.43871859297995 0.438718594856649 0 0 hPsi_site_17396 iPseU_CNN:0;iRNA_PseU:0 17397 chr16 88871902 88871902 1 + G A UCEC 88871901 + 88871881 88871921 41 TGCCCTGGCCCAGCCCGGCCTGCCGGGACTCGTGCTGCCCT TGCCCTGGCCCAGCCCGGCCTACCGGGACTCGTGCTGCCCT < 41bp 0.438164624913953 0.84192853183241 0.24381101 0.7175825 prediction 0.68385706366482 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88871901 chr16:88871902 synonymous SNV . 0 22 hPsi_associated_SNPs_23673 0 0 1 0 1 Cytosol 0.438718270576404 0.438718517803611 0.435165 0 hPsi_site_17397 iPseU_CNN:0.435165;iRNA_PseU:0 17398 chr15 43697459 43697459 1 + G A rs3742973 43697458 + 43697438 43697478 41 AACAGCCACGTTCCCAAGGTTGTAACAGAAGATTCAAAACA AACAGCCACGTTCCCAAGGTTATAACAGAAGATTCAAAACA < 41bp 0.516479820676594 0.858408258318879 0.30027118 0.5056814 prediction 0.683856875284572 Functional Gain - TUBGCP4 ENSG00000137822 UTR3 Human protein_coding chr15:43697458 chr15:43697459 . . 0 22 hPsi_associated_SNPs_23674 0 0 1 0 1 Ribosome 0.438657268345963 0.438503539743531 0.0113627999999999 0 hPsi_site_17398 iPseU_CNN:0.0113627999999999;iRNA_PseU:0 17399 chr12 69864194 69864194 1 + G A rs186077541 69864193 + 69864173 69864213 41 TTCGGGCCGGAGAGAGGCCTTGTAGGCACAGCGGCTGAGAC TTCGGGCCGGAGAGAGGCCTTATAGGCACAGCGGCTGAGAC < 41bp 0.536009234906868 0.877937472847835 0.39024055 0.6352907 prediction 0.683856475881933 Functional Gain - FRS2 ENSG00000166225 UTR5 Human protein_coding chr12:69864193 chr12:69864194 . . 0 22 hPsi_associated_SNPs_23675 0 0 1 0 0 Nucleus 0.43871859410458 0.438718868720197 0.2705814 0 hPsi_site_17399 iPseU_CNN:0.2705814;iRNA_PseU:0 17400 chr1 78481811 78481811 1 + G A KIRC 78481810 + 78481790 78481830 41 AAGAATTATTGGATATGGGCTGCCATTTCCAAAAAATCCTG AAGAATTATTGGATATGGGCTACCATTTCCAAAAAATCCTG < 41bp 0.524418828342648 0.866346738238931 0.19502866 0.27152747 prediction 0.683855819792567 Functional Gain - DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78481810 chr1:78481811 synonymous SNV . 0 22 hPsi_associated_SNPs_23676 0 0 1 0 0 nucleoplasm 0.438690889223613 0.438749656079042 0 0 hPsi_site_17400 iPseU_CNN:0;iRNA_PseU:0 17401 chr22 44322954 44322954 1 + C A COAD 44322953 + 44322933 44322973 41 CCCGGCCAATGTCCACCAGCTCATCTCCGGCAAAATAGGCA CCCGGCCAATGTCCACCAGCTAATCTCCGGCAAAATAGGCA < 41bp 0.515525742973002 0.857452198440222 0.26592004 0.74157465 prediction 0.683852910934441 Functional Gain - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44322953 chr22:44322954 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23677 0 0 0 0 1 cytosol 0.438718719979365 0.438718592905343 0.4831493 0 hPsi_site_17401 iPseU_CNN:0.4831493;iRNA_PseU:0 17402 chr20 43804588 43804588 1 + C A UCEC 43804587 + 43804567 43804607 41 GGACAAGTTTCAGTTAAAGGTCAAGATAAAGTCAAAGCGCA GGACAAGTTTCAGTTAAAGGTAAAGATAAAGTCAAAGCGCA < 41bp 0.500068780298439 0.84198748224295 0.17473575 0.3210762 prediction 0.683837403889021 Functional Gain - PI3 ENSG00000124102 CDS Human protein_coding chr20:43804587 chr20:43804588 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23678 0 0 0 0 1 exosome 0.438718592995381 0.438718592995123 0 0 hPsi_site_17402 iPseU_CNN:0;iRNA_PseU:0 17403 chr9 133907465 133907465 1 + C A UCEC 133907464 + 133907444 133907484 41 AGCACCGAACTCCTCATCTCTCTAGACCGGCTCAACACGTT AGCACCGAACTCCTCATCTCTATAGACCGGCTCAACACGTT < 41bp 0.513743339960818 0.85564805264731 0.6163252 0.6422992 prediction 0.683809425372985 Functional Gain - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133907464 chr9:133907465 nonsynonymous SNV 0.837 5 22 hPsi_associated_SNPs_23679 0 0 0 0 2 chromatin 0.438858850991155 0.438738265076821 0.0519479999999999 0 hPsi_site_17403 iPseU_CNN:0.0519479999999999;iRNA_PseU:0 17404 chr3 52727257 52727257 1 + G A rs2289247 52727256 + 52727236 52727276 41 AATTCTCTGGAATTTTTTACTGTGCTTGCTCAGAGAAGAGG AATTCTCTGGAATTTTTTACTATGCTTGCTCAGAGAAGAGG < 41bp 0.4466617080642 0.841896152459041 0.39773092 0.795305 prediction 0.683792304918082 Functional Gain - GNL3 ENSG00000163938 CDS Human protein_coding chr3:52727256 chr3:52727257 nonsynonymous SNV 0.570 0 22 hPsi_associated_SNPs_23680 0 1 1 0 1 Ribosome 0.43871859321202 0.438718620680418 0.59061 0 hPsi_site_17404 iPseU_CNN:0.59061;iRNA_PseU:0 17405 chr2 131487345 131487345 1 + G A SKCM 131487344 + 131487324 131487364 41 ATACATCCTACCACCAAGCATGGGCACCCAGCCGGGATGTG ATACATCCTACCACCAAGCATAGGCACCCAGCCGGGATGTG < 41bp 0.465093559928324 0.841893492199855 0.1838851 0.29242563 prediction 0.68378698439971 Functional Gain - GPR148 ENSG00000173302 CDS Human protein_coding chr2:131487344 chr2:131487345 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_23681 0 0 0 0 0 unknown 0.438718592990002 0.438718593226572 0 0 hPsi_site_17405 iPseU_CNN:0;iRNA_PseU:0 17406 chr7 143701315 143701315 1 + G A UCEC 143701314 + 143701294 143701334 41 TTGGAGACCTGGTACATCTCTGTGACTGTGCCCAAGTTACT TTGGAGACCTGGTACATCTCTATGACTGTGCCCAAGTTACT < 41bp 0.536486136964343 0.878374640880056 0.25678128 0.27037326 prediction 0.683777007831428 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701314 chr7:143701315 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_23682 0 0 0 0 0 unknown 0.438718594002555 0.438718592834396 0 0 hPsi_site_17406 iPseU_CNN:0;iRNA_PseU:0 17407 chr4 6863182 6863182 1 + C A UCEC 6863181 + 6863161 6863201 41 GTAGCAGTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAG GTAGCAGTAGCAGCAGTGGTTATGTCAAACAGCTGTGCAAG < 41bp 0.501498349999763 0.84337796923601 0.24275833 0.39554644 prediction 0.683759238472493 Functional Gain - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6863181 chr4:6863182 nonsynonymous SNV 0.068 1 22 hPsi_associated_SNPs_23683 0 0 0 0 0 Nucleus 0.402602719609852 0.417984017792757 0 0 hPsi_site_17407 iPseU_CNN:0;iRNA_PseU:0 17408 chr4 146032188 146032188 1 + G A STAD 146032187 + 146032167 146032207 41 GAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAA GAGTTGCAGAGATTTGCTTGTACTGTCGTTTGCATACAGAA < 41bp 0.461232701827766 0.841879156704765 0.23245883 0.4392339 prediction 0.68375831340953 Functional Gain - ABCE1 ENSG00000164163 CDS Human protein_coding chr4:146032187 chr4:146032188 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23684 0 0 1 0 2 Ribosome 0.438849627967571 0.440186163406101 0 0 hPsi_site_17408 iPseU_CNN:0;iRNA_PseU:0 17409 chr3 138153907 138153907 1 + C A UCEC 138153906 + 138153886 138153926 41 CCTGGCCGCCGCCTTCGAATTCCTTGACAATGAACGCGAGT CCTGGCCGCCGCCTTCGAATTACTTGACAATGAACGCGAGT < 41bp 0.507763698141317 0.849636991282202 0.3995366 0.931061 prediction 0.68374658628177 Functional Gain - ESYT3 ENSG00000158220 CDS Human protein_coding chr3:138153906 chr3:138153907 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_23685 0 0 0 0 1 nucleoplasm 0.4387031510385 0.438591874321314 0.862122 0 hPsi_site_17409 iPseU_CNN:0.862122;iRNA_PseU:0 17410 chr3 121980667 121980667 1 + C A UCEC 121980666 + 121980646 121980686 41 TGGTAGAGGTGATTCAAAATTCCACGGCCAAAGTCATCGTG TGGTAGAGGTGATTCAAAATTACACGGCCAAAGTCATCGTG < 41bp 0.493556896867875 0.841872850064535 0.36737138 0.41845185 prediction 0.683745700129071 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:121980666 chr3:121980667 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_23686 0 0 0 0 0 exosome 0.438718646269125 0.438718351789242 0 0 hPsi_site_17410 iPseU_CNN:0;iRNA_PseU:0 17411 chr1 234458927 234458927 1 + G A LAML 234458926 + 234458906 234458946 41 GAGGAGCCTGCAGAGGGCGCTGCCGACCTGAGCTCAGGACC GAGGAGCCTGCAGAGGGCGCTACCGACCTGAGCTCAGGACC < 41bp 0.540450089530513 0.882319867166388 0.33298624 0.717406 prediction 0.68373955527175 Functional Gain - SLC35F3 ENSG00000183780 CDS Human protein_coding chr1:234458926 chr1:234458927 nonsynonymous SNV 0.029 0 22 hPsi_associated_SNPs_23687 0 0 1 0 0 nucleoplasm 0.438713210229693 0.438721134918793 0.434812 0 hPsi_site_17411 iPseU_CNN:0.434812;iRNA_PseU:0 17412 chr15 73735612 73735612 1 + G A COAD 73735611 + 73735591 73735631 41 CTCTGCAGCGGTACGCCCGCTGCATACCCTCAAACACCAGA CTCTGCAGCGGTACGCCCGCTACATACCCTCAAACACCAGA < 41bp 0.474879629653107 0.841863704714755 0.8219013 0.9510642 prediction 0.68372740942951 Functional Gain - REC114 ENSG00000183324 CDS Human protein_coding chr15:73735611 chr15:73735612 nonsynonymous SNV 0.086 0 22 hPsi_associated_SNPs_23688 0 0 0 0 1 Cytosol 0.437978568871931 0.437335527786486 0.2583258 0 hPsi_site_17412 iPseU_CNN:0.2583258;iRNA_PseU:0 17413 chr3 196387902 196387902 1 + C A COAD 196387901 + 196387881 196387921 41 TGGATTTCAGGAATATGGCATCTTTAAGGAGCCTGTCTCTG TGGATTTCAGGAATATGGCATATTTAAGGAGCCTGTCTCTG < 41bp 0.492561255791073 0.841862307036684 0.5590794 0.59611595 prediction 0.683724614073368 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196387901 chr3:196387902 nonsynonymous SNV 0.435 2 22 hPsi_associated_SNPs_23689 0 0 0 0 0 chromatin 0.438718592995102 0.438718592415609 0.0740730999999999 0 hPsi_site_17413 iPseU_CNN:0.0740730999999999;iRNA_PseU:0 17414 chr1 171504657 171504657 1 + C A UCEC 171504656 + 171504636 171504676 41 AAACAGAACCAGAATCAGGGTCTCAACCTCGGCCGGCTGTA AAACAGAACCAGAATCAGGGTATCAACCTCGGCCGGCTGTA < 41bp 0.502422292229254 0.844283642758761 0.37543026 0.68473256 prediction 0.683722701059014 Functional Gain - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171504656 chr1:171504657 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_23690 0 0 1 0 2 Cytosol 0.438803702711441 0.438719030035304 0.36946512 0 hPsi_site_17414 iPseU_CNN:0.36946512;iRNA_PseU:0 17415 chr3 9982650 9982650 1 + G A KIRC 9982649 + 9982629 9982669 41 GGCTACGGGGGTGAGGCCTGTGGCCAGTGTGGCCTTGGCTA GGCTACGGGGGTGAGGCCTGTAGCCAGTGTGGCCTTGGCTA < 41bp 0.424507644270339 0.841860757644459 0.33662394 0.78470814 prediction 0.683721515288918 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9982649 chr3:9982650 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23691 0 0 1 0 1 chromatin 0.438718592995102 0.438718589948336 0.56941628 0 hPsi_site_17415 iPseU_CNN:0.56941628;iRNA_PseU:0 17416 chr1 242023851 242023851 1 + G A SKCM 242023850 + 242023830 242023870 41 AATTGGACATTATCTCAAGATGAATATCACGGTACCAGAGG AATTGGACATTATCTCAAGATAAATATCACGGTACCAGAGG < 41bp 0.544487091247306 0.886345054321499 0.27568233 0.56540453 prediction 0.683715926148387 Functional Gain - EXO1 ENSG00000174371 CDS Human protein_coding chr1:242023850 chr1:242023851 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23692 0 0 1 0 1 Nucleus 0.438008053738783 0.438726019984664 0.13080906 0 hPsi_site_17416 iPseU_CNN:0.13080906;iRNA_PseU:0 17417 chr3 129218783 129218783 1 + G A PRAD 129218782 + 129218762 129218802 41 AGACCCCAAAGAAACAAAGATGCTAATCACCAAACAGGCTG AGACCCCAAAGAAACAAAGATACTAATCACCAAACAGGCTG < 41bp 0.465766942981234 0.841850920195928 0.14422303 0.27376395 prediction 0.683701840391857 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129218782 chr3:129218783 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23693 0 0 0 0 1 Nucleus 0.438756396441421 0.438718871797785 0 0 hPsi_site_17417 iPseU_CNN:0;iRNA_PseU:0 17418 chr16 2578287 2578287 1 + G A rs143596753 2578286 + 2578266 2578306 41 GCTCCTGACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCT GCTCCTGACCAGCGACCGGCTACCCGCAGGCCGCTGCATCT < 41bp 0.432596966018055 0.841843573861305 0.22670746 0.78893554 prediction 0.68368714772261 Functional Gain - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578286 chr16:2578287 synonymous SNV . 0 22 hPsi_associated_SNPs_23694 0 0 1 0 1 Ribosome 0.438759065874918 0.438748567724832 0.57787108 0 hPsi_site_17418 iPseU_CNN:0.57787108;iRNA_PseU:0 17419 chr15 45706921 45706921 1 + G A SKCM 45706920 + 45706900 45706940 41 TCACTGCTCTTTCGTTTCAGTGAGTGGAGCTGATCTGTTTT TCACTGCTCTTTCGTTTCAGTAAGTGGAGCTGATCTGTTTT < 41bp 0.449311416293468 0.841839230123093 0.26718837 0.62181574 prediction 0.683678460246187 Functional Gain - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45706920 chr15:45706921 synonymous SNV . 0 22 hPsi_associated_SNPs_23695 0 0 1 1 1 chromatin 0.438718609697205 0.438717431715749 0.24363148 0 hPsi_site_17419 iPseU_CNN:0.24363148;iRNA_PseU:0 17420 chr9 131469566 131469566 1 + G A UCEC 131469565 + 131469545 131469585 41 GCGCCTGGCCTTGGAGCAGCTGCTGGAGCAACTGCCTCCTG GCGCCTGGCCTTGGAGCAGCTACTGGAGCAACTGCCTCCTG < 41bp 0.427166210494444 0.841835673963693 0.23304302 0.62339646 prediction 0.683671347927385 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131469565 chr9:131469566 synonymous SNV . 0 22 hPsi_associated_SNPs_23696 0 0 1 0 1 chromatin 0.438708595573958 0.43871425775404 0.24679292 0 hPsi_site_17420 iPseU_CNN:0.24679292;iRNA_PseU:0 17421 chr11 128781214 128781214 1 + G A OV 128781213 + 128781193 128781233 41 ATGAACCAGGACATGGAGATTGGAGTCACTCCCTGGGACCC ATGAACCAGGACATGGAGATTAGAGTCACTCCCTGGGACCC < 41bp 0.544958482920778 0.886787442123553 0.29114455 0.47797605 prediction 0.68365791840555 Functional Gain - KCNJ5 ENSG00000120457 CDS Human protein_coding chr11:128781213 chr11:128781214 nonsynonymous SNV 0.882 1 22 hPsi_associated_SNPs_23697 0 0 0 0 1 Ribosome 0.436847023585727 0.438868264880522 0 0 hPsi_site_17421 iPseU_CNN:0;iRNA_PseU:0 17422 chr19 35660478 35660478 1 + G A UCEC 35660477 + 35660457 35660497 41 CTTCACCCACAGGTGGCAAGTGCAGGCAGCTGTCCCGGTTA CTTCACCCACAGGTGGCAAGTACAGGCAGCTGTCCCGGTTA < 41bp 0.543467771852499 0.885288681848238 0.24106464 0.5460129 prediction 0.683641819991479 Functional Gain - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35660477 chr19:35660478 nonsynonymous SNV 0.787 1 22 hPsi_associated_SNPs_23698 0 0 1 0 1 Ribosome 0.43870844414407 0.438661705500429 0.0920258 0 hPsi_site_17422 iPseU_CNN:0.0920258;iRNA_PseU:0 17423 chr13 24895191 24895191 1 + C A UCEC 24895190 + 24895170 24895210 41 GTGATCAAGGCTCAAGAGGATCCCCAGGAAAACATGGCCCC GTGATCAAGGCTCAAGAGGATACCCAGGAAAACATGGCCCC < 41bp 0.497762948708401 0.841818042599346 0.3286513 0.6303699 prediction 0.683636085198692 Functional Gain - C1QTNF9 ENSG00000240654 CDS Human protein_coding chr13:24895190 chr13:24895191 nonsynonymous SNV 0.227 2 22 hPsi_associated_SNPs_23699 0 0 0 0 1 exosome 0.438718594017802 0.438743291619576 0.2607398 0 hPsi_site_17423 iPseU_CNN:0.2607398;iRNA_PseU:0 17424 chr14 103969455 103969455 1 + G A UCEC 103969454 + 103969434 103969474 41 TGCAGTGGGAAATGGAAGTGTGCAAGCTGCCAAGACTGTCT TGCAGTGGGAAATGGAAGTGTACAAGCTGCCAAGACTGTCT < 41bp 0.542661151683371 0.884471380405958 0.28049093 0.44311857 prediction 0.683620457445172 Functional Gain - MARK3 ENSG00000075413 CDS Human protein_coding chr14:103969454 chr14:103969455 nonsynonymous SNV 0.856 4 22 hPsi_associated_SNPs_23700 0 0 1 0 0 Cytosol 0.438718321494354 0.438720768767933 0 0 hPsi_site_17424 iPseU_CNN:0;iRNA_PseU:0 17425 chr1 110085881 110085881 1 + C A UCEC 110085880 + 110085860 110085900 41 CCTCCGAAAATTTGTCTTCGTCTTCCACCTCTGCCTGGTGG CCTCCGAAAATTTGTCTTCGTATTCCACCTCTGCCTGGTGG < 41bp 0.513402606207826 0.855212485641392 0.29623473 0.7032784 prediction 0.683619758867131 Functional Gain - GPR61 ENSG00000156097 CDS Human protein_coding chr1:110085880 chr1:110085881 synonymous SNV . 0 22 hPsi_associated_SNPs_23701 0 0 0 0 0 exosome 0.438718593537393 0.43871859493541 0.4065568 0 hPsi_site_17425 iPseU_CNN:0.4065568;iRNA_PseU:0 17426 chr5 140554732 140554732 1 + G A LUSC 140554731 + 140554711 140554751 41 GAAACCAATTATCCCCAACCTGCTACCCCAGAGCACAGGCA GAAACCAATTATCCCCAACCTACTACCCCAGAGCACAGGCA < 41bp 0.534878500788399 0.876685554316215 0.23031384 0.30342853 prediction 0.683614107055632 Functional Gain - PCDHB7 ENSG00000113212 CDS Human protein_coding chr5:140554731 chr5:140554732 synonymous SNV . 0 22 hPsi_associated_SNPs_23702 0 0 0 0 0 exosome 0.438718592995105 0.438718592995164 0 0 hPsi_site_17426 iPseU_CNN:0;iRNA_PseU:0 17427 chr14 23313618 23313618 1 + G A rs371549086 23313617 + 23313597 23313637 41 GGTGAGGAATAACCAAGTGATGGATGGATACCCAATGCCCA GGTGAGGAATAACCAAGTGATAGATGGATACCCAATGCCCA < 41bp 0.438883734916192 0.841801242580355 0.18438569 0.42935848 prediction 0.683602485160709 Functional Gain - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23313617 chr14:23313618 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23703 0 0 0 0 1 cytosol 0.438718632264151 0.438718592877696 0 0 hPsi_site_17427 iPseU_CNN:0;iRNA_PseU:0 17428 chr1 11562022 11562022 1 + C A GBM 11562021 + 11562001 11562041 41 CCCCACGAGGTGCTCAAGGATCTGCCGCTGGGCTCCTACTC CCCCACGAGGTGCTCAAGGATATGCCGCTGGGCTCCTACTC < 41bp 0.511058030132865 0.852855793555968 0.5980304 0.7608161 prediction 0.683595526846205 Functional Gain - DISP3 ENSG00000204624 CDS Human protein_coding chr1:11562021 chr1:11562022 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_23704 0 0 1 0 0 exosome 0.438711860115231 0.438658233961672 0.3255714 0 hPsi_site_17428 iPseU_CNN:0.3255714;iRNA_PseU:0 17429 chr19 54466453 54466453 1 + G A HNSC 54466452 + 54466432 54466472 41 CCTCTGGTGCGAGAAGGGGGTGCAGGTGCTGCTGACGACGG CCTCTGGTGCGAGAAGGGGGTACAGGTGCTGCTGACGACGG < 41bp 0.540442272010371 0.882239453328644 0.4758792 0.8397325 prediction 0.683594362636547 Functional Gain - CACNG8 ENSG00000142408 CDS Human protein_coding chr19:54466452 chr19:54466453 synonymous SNV . 0 22 hPsi_associated_SNPs_23705 0 0 1 0 0 exosome 0.439788564426162 0.438806184868321 0.679465 0 hPsi_site_17429 iPseU_CNN:0.679465;iRNA_PseU:0 17430 chrX 38420832 38420832 1 + G A BRCA 38420831 + 38420811 38420851 41 GAGAATGGAGACCAAACCTGTGATAACCTGTCTCAAAACCC GAGAATGGAGACCAAACCTGTAATAACCTGTCTCAAAACCC < 41bp 0.509465584343132 0.851250629032048 0.32661998 0.68336344 prediction 0.683570089377832 Functional Gain - TSPAN7 ENSG00000156298 CDS Human protein_coding chrX:38420831 chrX:38420832 synonymous SNV . 0 22 hPsi_associated_SNPs_23706 0 0 1 0 1 Ribosome 0.438771301041889 0.438717842064053 0.36672688 0 hPsi_site_17430 iPseU_CNN:0.36672688;iRNA_PseU:0 17431 chr9 125281464 125281464 1 + G A GBM 125281463 + 125281443 125281483 41 TGTGTCTGAGTTCCTCCTCCTGGACCTCCCCATCTGGCCAG TGTGTCTGAGTTCCTCCTCCTAGACCTCCCCATCTGGCCAG < 41bp 0.467720495464664 0.841780940536608 0.18327278 0.3802002 prediction 0.683561881073215 Functional Gain - OR1J4 ENSG00000239590 CDS Human protein_coding chr9:125281463 chr9:125281464 synonymous SNV . 0 22 hPsi_associated_SNPs_23707 0 0 0 0 0 exosome 0.438718592995102 0.438718592247808 0 0 hPsi_site_17431 iPseU_CNN:0;iRNA_PseU:0 17432 chr19 49261225 49261225 1 + G A LUAD 49261224 + 49261204 49261244 41 GGCCTGCAGCTTCCGGGAGCTGCTTCTTGAGGACGGATACA GGCCTGCAGCTTCCGGGAGCTACTTCTTGAGGACGGATACA < 41bp 0.552530506490928 0.894305499557823 0.1658513 0.50091475 prediction 0.683549986133791 Functional Gain - FGF21 ENSG00000105550 CDS Human protein_coding chr19:49261224 chr19:49261225 synonymous SNV . 0 22 hPsi_associated_SNPs_23708 0 0 0 0 1 unknown 0.438716997873343 0.438718176770461 0.00182949999999993 0 hPsi_site_17432 iPseU_CNN:0.00182949999999993;iRNA_PseU:0 17433 chr12 18891431 18891431 1 + G A READ 18891430 + 18891410 18891450 41 GTACTCTTGTCTCACCACAATGTAATGGGCGACTACCGATT GTACTCTTGTCTCACCACAATATAATGGGCGACTACCGATT < 41bp 0.462334060689054 0.84177494422926 0.21663928 0.2850351 prediction 0.68354988845852 Functional Gain - CAPZA3 ENSG00000177938 CDS Human protein_coding chr12:18891430 chr12:18891431 nonsynonymous SNV 0.837 1 22 hPsi_associated_SNPs_23709 0 0 0 0 0 unknown 0.43871866791313 0.438718554491271 0 0 hPsi_site_17433 iPseU_CNN:0;iRNA_PseU:0 17434 chr19 5908904 5908904 1 + G A UCEC 5908903 + 5908883 5908923 41 CCACAGCCTGCAGGCCACCGTGCACCAGAGGGACGAGCTCA CCACAGCCTGCAGGCCACCGTACACCAGAGGGACGAGCTCA < 41bp 0.442949798628111 0.841772829357979 0.24048936 0.64332163 prediction 0.683545658715959 Functional Gain - VMAC ENSG00000187650 CDS Human protein_coding chr19:5908903 chr19:5908904 synonymous SNV . 0 22 hPsi_associated_SNPs_23710 0 0 0 0 1 exosome 0.438720546330499 0.438725266450685 0.28664326 0 hPsi_site_17434 iPseU_CNN:0.28664326;iRNA_PseU:0 17435 chr14 75245215 75245215 1 + G A rs142846161 75245214 + 75245194 75245234 41 ACAGAGGACAAAAGTTCATTTGCCAGGACACAAAAAGGGTC ACAGAGGACAAAAGTTCATTTACCAGGACACAAAAAGGGTC < 41bp 0.437598367757568 0.841771184859633 0.22227976 0.6249145 prediction 0.683542369719267 Functional Gain - YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75245214 chr14:75245215 synonymous SNV . 0 22 hPsi_associated_SNPs_23711 0 0 1 0 1 Cytosol 0.438721173436076 0.438724705121224 0.249829 0 hPsi_site_17435 iPseU_CNN:0.249829;iRNA_PseU:0 17436 chr19 59058829 59058829 1 + G A UCEC 59058828 + 59058808 59058848 41 GTGCTGTTTTGTGAGAGCTGTGATACTCTCACCTGCCGAGA GTGCTGTTTTGTGAGAGCTGTAATACTCTCACCTGCCGAGA < 41bp 0.554354570233307 0.896123559747401 0.4033728 0.8997865 prediction 0.683537979028189 Functional Gain - TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59058828 chr19:59058829 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23712 0 0 1 0 2 Cytosol 0.438761280616681 0.43874678105481 0.799573 0 hPsi_site_17436 iPseU_CNN:0.799573;iRNA_PseU:0 17437 chr10 85901266 85901266 1 + G A STAD 85901265 + 85901245 85901285 41 TGCACCACCACCATGTTGGCTGCAAGGCTGGTGTGTCTCCG TGCACCACCACCATGTTGGCTACAAGGCTGGTGTGTCTCCG < 41bp 0.440602990250877 0.841761255995912 0.22257876 0.32985914 prediction 0.683522511991824 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85901265 chr10:85901266 nonsynonymous SNV 0.982 2 22 hPsi_associated_SNPs_23713 0 0 1 0 1 Ribosome 0.432747095846456 0.435036446077039 0 0 hPsi_site_17437 iPseU_CNN:0;iRNA_PseU:0 17438 chr4 56756475 56756475 1 + C A SARC 56756474 + 56756454 56756494 41 AGTTCAGGGAATCGCAGATCTCAGTCATCTTCCCTGTTGGA AGTTCAGGGAATCGCAGATCTAAGTCATCTTCCCTGTTGGA < 41bp 0.490046513211009 0.841751464480163 0.21059054 0.5601905 prediction 0.683502928960326 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56756474 chr4:56756475 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_23714 0 0 1 0 2 Cytosol 0.438717136681406 0.438683263132629 0.120381 0 hPsi_site_17438 iPseU_CNN:0.120381;iRNA_PseU:0 17439 chr8 82665442 82665442 1 + G A UCEC 82665441 + 82665421 82665461 41 GTGTTGAGGAACATGGGCTTTGCAGCAAAAGCGATGAAATC GTGTTGAGGAACATGGGCTTTACAGCAAAAGCGATGAAATC < 41bp 0.549066824417606 0.890812850370101 0.30731115 0.65646595 prediction 0.683492051904989 Functional Gain - CHMP4C ENSG00000164695 CDS Human protein_coding chr8:82665441 chr8:82665442 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_23715 0 0 1 0 1 Ribosome 0.439007952682376 0.438784554011664 0.3129319 0 hPsi_site_17439 iPseU_CNN:0.3129319;iRNA_PseU:0 17440 chr20 57415441 57415441 1 + G A SKCM 57415440 + 57415420 57415460 41 GAGCACGAGGAGGCAGACCTTGAGCTGTCCCTCCCCGAGTG GAGCACGAGGAGGCAGACCTTAAGCTGTCCCTCCCCGAGTG < 41bp 0.533827991156009 0.875573165394654 0.3642094 0.46493196 prediction 0.683490348477291 Functional Gain - GNAS ENSG00000087460 CDS Human protein_coding chr20:57415440 chr20:57415441 nonsynonymous SNV 0.871 1 22 hPsi_associated_SNPs_23716 0 0 0 0 0 Cytosol 0.438724573364865 0.438667229173957 0 0 hPsi_site_17440 iPseU_CNN:0;iRNA_PseU:0 17441 chr5 141358010 141358010 1 + C A UCEC 141358009 + 141357989 141358029 41 CTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGA CTTTTGAGCTCAAGATTGGTTATCAGAAAAAAGTGCAGAGA < 41bp 0.496621446757812 0.841743958914334 0.2151764 0.22894302 prediction 0.683487917828668 Functional Gain - RNF14 ENSG00000013561 CDS Human protein_coding chr5:141358009 chr5:141358010 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23717 0 0 1 0 0 Ribosome 0.438976069592358 0.438341885571095 0 0 hPsi_site_17441 iPseU_CNN:0;iRNA_PseU:0 17442 chr3 179080190 179080190 1 + G A BLCA 179080189 + 179080169 179080209 41 CCTTCACATGGACAAAGATTTGAAAGCTGGCTGTCTTGTAC CCTTCACATGGACAAAGATTTAAAAGCTGGCTGTCTTGTAC < 41bp 0.445582258956167 0.841743733737927 0.2708918 0.54413503 prediction 0.683487467475855 Functional Gain - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179080189 chr3:179080190 synonymous SNV . 0 22 hPsi_associated_SNPs_23718 0 0 1 0 1 Ribosome 0.438735770466807 0.439216235744308 0.0882700599999999 0 hPsi_site_17442 iPseU_CNN:0.0882700599999999;iRNA_PseU:0 17443 chr20 34136264 34136264 1 + G A UCEC 34136263 + 34136243 34136283 41 GTCACTCCCTGCCCTACAGGTGCTGTAACACCTGTGAAGAT GTCACTCCCTGCCCTACAGGTACTGTAACACCTGTGAAGAT < 41bp 0.444788272972156 0.841738689655087 0.21866041 0.64296925 prediction 0.683477379310174 Functional Gain - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34136263 chr20:34136264 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_23719 0 0 1 0 1 Ribosome 0.438718590031676 0.43869044798799 0.2859385 0 hPsi_site_17443 iPseU_CNN:0.2859385;iRNA_PseU:0 17444 chr4 22820532 22820532 1 + G A OV 22820531 + 22820511 22820551 41 ATCATCCGAAACAATGGCCTTGAAGCACATCTGTAGGCAAG ATCATCCGAAACAATGGCCTTAAAGCACATCTGTAGGCAAG < 41bp 0.465003325372989 0.841738470139266 0.25158763 0.44977754 prediction 0.683476940278531 Functional Gain - GBA3 ENSG00000249948 CDS Human polymorphic_pseudogene chr4:22820531 chr4:22820532 unknown 0.039 0 22 hPsi_associated_SNPs_23720 0 0 0 1 0 unknown 0.438718592996465 0.438718593037208 0 0 hPsi_site_17444 iPseU_CNN:0;iRNA_PseU:0 17445 chr19 55481608 55481608 1 + C A CESC 55481607 + 55481587 55481627 41 GGAGATGGCGAGCCTCCAGGTCTTTGAAAAGATGCACCGAA GGAGATGGCGAGCCTCCAGGTATTTGAAAAGATGCACCGAA < 41bp 0.489688992894127 0.841733970836206 0.46569014 0.8088101 prediction 0.683467941672413 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55481607 chr19:55481608 synonymous SNV . 0 22 hPsi_associated_SNPs_23721 0 0 1 0 2 Cytosol 0.438718593011725 0.438718591807476 0.6176202 0 hPsi_site_17445 iPseU_CNN:0.6176202;iRNA_PseU:0 17446 chr10 105331329 105331329 1 + C A LUSC 105331328 + 105331308 105331348 41 CAGCAAGGACCCGTCCCGCATCCACCCTGACTCGCTGCCCA CAGCAAGGACCCGTCCCGCATACACCCTGACTCGCTGCCCA < 41bp 0.493750416051136 0.841732919771832 0.71553046 0.6593331 prediction 0.683465839543663 Functional Gain - NEURL1 ENSG00000107954 CDS Human protein_coding chr10:105331328 chr10:105331329 synonymous SNV . 0 22 hPsi_associated_SNPs_23722 0 0 0 0 1 Nucleus 0.438699596514378 0.437760534342408 0 0 hPsi_site_17446 iPseU_CNN:0;iRNA_PseU:0 17447 chr1 247607361 247607361 1 + G A UCEC 247607360 + 247607340 247607380 41 GAATCTCACGCACCTTTACCTGCGAGGCAACACTCTCGGAG GAATCTCACGCACCTTTACCTACGAGGCAACACTCTCGGAG < 41bp 0.433042164624318 0.841730498241465 0.56143975 0.9074179 prediction 0.683460996482931 Functional Gain - NLRP3 ENSG00000162711 CDS Human protein_coding chr1:247607360 chr1:247607361 synonymous SNV . 0 22 hPsi_associated_SNPs_23723 0 0 0 0 2 Nucleus 0.438718752004142 0.438718594710481 0.6919563 0 hPsi_site_17447 iPseU_CNN:0.6919563;iRNA_PseU:0 17448 chr12 113624665 113624665 1 + G A UCEC 113624664 + 113624644 113624684 41 GTCATATGTGGATGAGACTCTGTTTGGCAGCCCAGCAGGCA GTCATATGTGGATGAGACTCTATTTGGCAGCCCAGCAGGCA < 41bp 0.555912327000202 0.89764014368803 0.53452945 0.76032305 prediction 0.683455633375656 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113624664 chr12:113624665 synonymous SNV . 0 22 hPsi_associated_SNPs_23724 0 0 1 0 0 Ribosome 0.438721087088368 0.438752092606066 0.4515872 0 hPsi_site_17448 iPseU_CNN:0.4515872;iRNA_PseU:0 17449 chr22 20760706 20760706 1 + G A LUSC 20760705 + 20760685 20760725 41 CTGCCACGCGTACCTGCTCGTGCACCGGCGCATCCACAGCG CTGCCACGCGTACCTGCTCGTACACCGGCGCATCCACAGCG < 41bp 0.444267739679015 0.841722496838899 0.181916 0.679405 prediction 0.683444993677799 Functional Gain - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20760705 chr22:20760706 synonymous SNV . 0 22 hPsi_associated_SNPs_23725 0 0 0 0 0 Cytosol 0.439550148512294 0.440538577517472 0.35881 0 hPsi_site_17449 iPseU_CNN:0.35881;iRNA_PseU:0 17450 chr11 250833 250833 1 + C A UCEC 250832 + 250812 250852 41 GCAGCTAATGAAGCCCAGCTTCTGAGGAAAATTCAGTTGTT GCAGCTAATGAAGCCCAGCTTATGAGGAAAATTCAGTTGTT < 41bp 0.486077392859614 0.84172074925323 0.20562568 0.30244625 prediction 0.683441498506461 Functional Gain - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:250832 chr11:250833 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_23726 0 0 1 1 2 Ribosome 0.438718574237458 0.384702953326496 0 0 hPsi_site_17450 iPseU_CNN:0;iRNA_PseU:0 17451 chr20 36431366 36431366 1 + C A UCEC 36431365 + 36431345 36431385 41 TGCCATAAGTTTGTTGACATTCTTGGCTTACGAACCATCTT TGCCATAAGTTTGTTGACATTATTGGCTTACGAACCATCTT < 41bp 0.507610886350037 0.849326811440499 0.45444813 0.4372469 prediction 0.683431850180923 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36431365 chr20:36431366 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23727 0 0 0 0 2 Cytosol 0.438435392327632 0.442482354588342 0 0 hPsi_site_17451 iPseU_CNN:0;iRNA_PseU:0 17452 chr12 57968949 57968949 1 + C A COAD 57968948 + 57968928 57968968 41 AAATCAAATCAGAAGTCAAGTCTGTGGTCAAGCGGTGCCGG AAATCAAATCAGAAGTCAAGTATGTGGTCAAGCGGTGCCGG < 41bp 0.516760238817772 0.858475032776187 0.31356806 0.62745976 prediction 0.68342958791683 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57968948 chr12:57968949 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23728 0 0 1 0 1 Cytosol 0.438718345182508 0.438718592994627 0.25491952 0 hPsi_site_17452 iPseU_CNN:0.25491952;iRNA_PseU:0 17453 chr19 48342969 48342969 1 + C A UCEC 48342968 + 48342948 48342988 41 TGGGTCTCCGAGCTCCTATTTCAGCGGCCTAGACCCCTACC TGGGTCTCCGAGCTCCTATTTAAGCGGCCTAGACCCCTACC < 41bp 0.514603445967713 0.856318020596697 0.2507304 0.7158485 prediction 0.683429149257969 Functional Gain - CRX ENSG00000105392 CDS Human protein_coding chr19:48342968 chr19:48342969 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_23729 0 0 0 0 0 Nucleus 0.438718592995092 0.438718592995102 0.431697 0 hPsi_site_17453 iPseU_CNN:0.431697;iRNA_PseU:0 17454 chr1 212798993 212798993 1 + C T SKCM 212798994 - 212798974 212799014 41 TTCTGTAGATGTTTTGGGGATGGATGCATTGAGCACATTAG TTCTGTAGATGTTTTGGGGATAGATGCATTGAGCACATTAG < 41bp 0.512637548810472 0.854346432121813 0.26297873 0.27527758 prediction 0.683417766622683 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798994 chr1:212798993 synonymous SNV . 0 22 hPsi_associated_SNPs_23730 0 0 0 0 0 exosome 0.438718593096026 0.438718322558051 0 0 hPsi_site_17454 iPseU_CNN:0;iRNA_PseU:0 17455 chr3 113327010 113327010 1 + G A OV 113327009 + 113326989 113327029 41 CCTCTTCCTGCTGATAGTCTTGCGCCGCGACATCCTCCATC CCTCTTCCTGCTGATAGTCTTACGCCGCGACATCCTCCATC < 41bp 0.421793552150179 0.841702418471105 0.32211405 0.8035432 prediction 0.683404836942209 Functional Gain - SIDT1 ENSG00000072858 CDS Human protein_coding chr3:113327009 chr3:113327010 synonymous SNV . 0 22 hPsi_associated_SNPs_23731 0 0 0 0 2 exosome 0.438717813402015 0.438706326776911 0.6070864 0 hPsi_site_17455 iPseU_CNN:0.6070864;iRNA_PseU:0 17456 chr22 35729424 35729424 1 + G A HNSC 35729423 + 35729403 35729443 41 AGTGAGGCCGAGCCGGCAGCTGACCTGATCGACATGGGCCC AGTGAGGCCGAGCCGGCAGCTAACCTGATCGACATGGGCCC < 41bp 0.434015132200646 0.841694459826328 0.28846633 0.5246439 prediction 0.683388919652656 Functional Gain - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35729423 chr22:35729424 nonsynonymous SNV 0.721 0 22 hPsi_associated_SNPs_23732 0 0 1 0 2 Cytosol 0.440186241728512 0.438519892678183 0.0492878000000001 0 hPsi_site_17456 iPseU_CNN:0.0492878000000001;iRNA_PseU:0 17457 chr3 126137546 126137546 1 + G A SKCM 126137545 + 126137525 126137565 41 GGAGCGGGCCGAGAAATCCCTGGAGAAGGACGCCGCCTTGT GGAGCGGGCCGAGAAATCCCTAGAGAAGGACGCCGCCTTGT < 41bp 0.42236162956548 0.841692882548025 0.33335966 0.4220494 prediction 0.683385765096051 Functional Gain - CFAP100 ENSG00000163885 CDS Human protein_coding chr3:126137545 chr3:126137546 synonymous SNV . 0 22 hPsi_associated_SNPs_23733 0 0 0 0 1 nucleus 0.438718592995968 0.438718589163004 0 0 hPsi_site_17457 iPseU_CNN:0;iRNA_PseU:0 17458 chr1 246797278 246797278 1 + G A LUSC 246797277 + 246797257 246797297 41 ACGATTGTATCATGAGCAATTGCTCGCAAATCTTTCTGCCA ACGATTGTATCATGAGCAATTACTCGCAAATCTTTCTGCCA < 41bp 0.546628260526578 0.888315455345627 0.23218977 0.49312204 prediction 0.683374389638099 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246797277 chr1:246797278 synonymous SNV . 0 22 hPsi_associated_SNPs_23734 0 0 0 0 2 Ribosome 0.439553627074808 0.439373214873991 0 0 hPsi_site_17458 iPseU_CNN:0;iRNA_PseU:0 17459 chr11 7669702 7669702 1 + C A UCEC 7669701 + 7669681 7669721 41 TGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTAT TGGCCTGGCTCAGTATGTGATATTTGCCAGGCAGTGGGTAT < 41bp 0.487984880425312 0.84167829628774 0.59082186 0.7013581 prediction 0.68335659257548 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7669701 chr11:7669702 synonymous SNV . 0 22 hPsi_associated_SNPs_23735 0 0 0 0 2 Cytosol 0.43901122850045 0.438243630746436 0.22107248 0 hPsi_site_17459 iPseU_CNN:0.22107248;iRNA_PseU:0 17460 chr6 88321908 88321908 1 + G A STAD 88321907 + 88321887 88321927 41 ATGCAGTATCATCTCTATTGTGCATAGAACTGTTCCAATCT ATGCAGTATCATCTCTATTGTACATAGAACTGTTCCAATCT < 41bp 0.543724164950285 0.885402390451042 0.28103614 0.66008246 prediction 0.683356451001513 Functional Gain - ORC3 ENSG00000135336 CDS Human protein_coding chr6:88321907 chr6:88321908 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_23736 0 0 1 1 1 Cytosol 0.438904147459162 0.438715242922237 0.32016492 0 hPsi_site_17460 iPseU_CNN:0.32016492;iRNA_PseU:0 17461 chr13 46287426 46287426 1 + C A HNSC 46287425 + 46287405 46287445 41 GCAGGATGGCGAGCCAGCACTCCTATCCACTGAACCGCTTC GCAGGATGGCGAGCCAGCACTACTATCCACTGAACCGCTTC < 41bp 0.492981190569378 0.841674589708264 0.21396914 0.52524996 prediction 0.683349179416529 Functional Gain - SPERT ENSG00000174015 CDS Human protein_coding chr13:46287425 chr13:46287426 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_23737 0 0 0 0 0 exosome 0.438731675056527 0.438747667133955 0.05049992 0 hPsi_site_17461 iPseU_CNN:0.05049992;iRNA_PseU:0 17462 chr10 99338074 99338074 1 + C A COAD 99338073 + 99338053 99338093 41 GGGCGGGATCCAGAACCTCATCGAGCTGCGGAAGAAACGCA GGGCGGGATCCAGAACCTCATAGAGCTGCGGAAGAAACGCA < 41bp 0.518958138280215 0.860631948423865 0.17121258 0.22532082 prediction 0.6833476202873 Functional Gain - ANKRD2 ENSG00000165887 CDS Human protein_coding chr10:99338073 chr10:99338074 synonymous SNV . 0 22 hPsi_associated_SNPs_23738 0 0 0 0 2 exosome 0.438718604478293 0.438718593342981 0 0 hPsi_site_17462 iPseU_CNN:0;iRNA_PseU:0 17463 chr6 137245468 137245468 1 + C A UCEC 137245467 + 137245447 137245487 41 GGTGAACACCCTGGGCTCTATCATTTACTGTGTGGCCAAGT GGTGAACACCCTGGGCTCTATAATTTACTGTGTGGCCAAGT < 41bp 0.493625572359387 0.841671832135618 0.20867008 0.34139603 prediction 0.683343664271237 Functional Gain - SLC35D3 ENSG00000182747 CDS Human protein_coding chr6:137245467 chr6:137245468 synonymous SNV . 0 22 hPsi_associated_SNPs_23739 0 0 0 0 0 exosome 0.438718575587582 0.438718528035714 0 0 hPsi_site_17463 iPseU_CNN:0;iRNA_PseU:0 17464 chr11 57427299 57427299 1 + G A rs373867004 57427298 + 57427278 57427318 41 AGAAGAGCGAGGTCCCCGAGTGATGGTAGTGGGCCCCACTG AGAAGAGCGAGGTCCCCGAGTAATGGTAGTGGGCCCCACTG < 41bp 0.437003538622191 0.841668526139096 0.19937104 0.33928722 prediction 0.683337052278192 Functional Gain - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427298 chr11:57427299 synonymous SNV . 0 22 hPsi_associated_SNPs_23740 0 0 0 0 1 Cytosol 0.438718592982184 0.438718592995116 0 0 hPsi_site_17464 iPseU_CNN:0;iRNA_PseU:0 17465 chr7 129946692 129946692 1 + G A rs201038166 129946691 + 129946671 129946711 41 GGAGAAAATGGATATTTTCTTGTTGCCTGTGGCCAATCCTG GGAGAAAATGGATATTTTCTTATTGCCTGTGGCCAATCCTG < 41bp 0.55392419745493 0.895584917621646 0.24308577 0.29006404 prediction 0.683321440333432 Functional Gain - CPA4 ENSG00000128510 CDS Human protein_coding chr7:129946691 chr7:129946692 synonymous SNV . 0 22 hPsi_associated_SNPs_23741 0 0 0 0 2 Endoplasmic reticulum 0.438713448924477 0.438719240391055 0 0 hPsi_site_17465 iPseU_CNN:0;iRNA_PseU:0 17466 chr17 78023767 78023767 1 + G A CESC 78023766 + 78023746 78023786 41 GAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGC GAACCGACAGATCGAAAAGTTAAAGCTGGACCTCCAAGAGC < 41bp 0.557948592023419 0.899598897869316 0.2643145 0.72616667 prediction 0.683300611691795 Functional Gain - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78023766 chr17:78023767 synonymous SNV . 0 22 hPsi_associated_SNPs_23742 0 0 1 0 2 exosome 0.438718511279297 0.438718875752975 0.45233334 0 hPsi_site_17466 iPseU_CNN:0.45233334;iRNA_PseU:0 17467 chr2 201756936 201756936 1 + C A LGG 201756935 + 201756915 201756955 41 AAAGAAGGCAGACCTCATTCTCTCCTACCATCCGCCTATCT AAAGAAGGCAGACCTCATTCTATCCTACCATCCGCCTATCT < 41bp 0.5047997252688 0.846427364717703 0.2952187 0.622339 prediction 0.683255278897806 Functional Gain - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201756935 chr2:201756936 synonymous SNV . 0 22 hPsi_associated_SNPs_23743 0 0 1 0 0 Ribosome 0.43871860342471 0.438718592995755 0.244678 0 hPsi_site_17467 iPseU_CNN:0.244678;iRNA_PseU:0 17468 chr12 49743028 49743028 1 + G A HNSC 49743027 + 49743007 49743047 41 GTCTTGCTGGTGGCTGCTGTTGGCAACCAGACCTCAGACTT GTCTTGCTGGTGGCTGCTGTTAGCAACCAGACCTCAGACTT < 41bp 0.558095413077091 0.899722530828784 0.32804543 0.59971714 prediction 0.683254235503387 Functional Gain - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49743027 chr12:49743028 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23744 0 0 1 0 0 Ribosome 0.438718676207655 0.437078146852128 0.19943428 0 hPsi_site_17468 iPseU_CNN:0.19943428;iRNA_PseU:0 17469 chr1 67154869 67154869 1 + C A LUSC 67154868 + 67154848 67154888 41 CGACCAGCCACTCCTTTGGTTCCTTGCAGAAGTACCACTCC CGACCAGCCACTCCTTTGGTTACTTGCAGAAGTACCACTCC < 41bp 0.515902527147291 0.857529235326512 0.32403237 0.8200846 prediction 0.683253416358443 Functional Gain - SGIP1 ENSG00000118473 CDS Human protein_coding chr1:67154868 chr1:67154869 nonsynonymous SNV 0.921 0 22 hPsi_associated_SNPs_23745 0 0 0 0 2 Cytosol 0.438718592817613 0.438806853419977 0.6401692 0 hPsi_site_17469 iPseU_CNN:0.6401692;iRNA_PseU:0 17470 chr1 44456560 44456560 1 + G A rs59006081 44456559 + 44456539 44456579 41 TCAGCTCTTGGGAACCCCCTTGCTCCCAGGGGAGGGGAAAC TCAGCTCTTGGGAACCCCCTTACTCCCAGGGGAGGGGAAAC < 41bp 0.508160950446561 0.849783148312026 0.302352 0.6370944 prediction 0.683244395730928 Functional Gain - B4GALT2 ENSG00000117411 UTR3 Human protein_coding chr1:44456559 chr1:44456560 . . 0 22 hPsi_associated_SNPs_23746 0 0 1 0 0 Cytosol 0.438718593154895 0.43871858483519 0.2741888 0 hPsi_site_17470 iPseU_CNN:0.2741888;iRNA_PseU:0 17471 chr19 1053488 1053488 1 + G A CESC 1053487 + 1053467 1053507 41 AGACACGCGGCTGGCGGAGCTGAGGCTCACTGGCTACGGGA AGACACGCGGCTGGCGGAGCTAAGGCTCACTGGCTACGGGA < 41bp 0.444349855653849 0.841617538175001 0.20808229 0.27399635 prediction 0.683235076350001 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1053487 chr19:1053488 synonymous SNV . 0 22 hPsi_associated_SNPs_23747 0 0 0 0 1 Endoplasmic reticulum 0.438714244596925 0.438718592947931 0 0 hPsi_site_17471 iPseU_CNN:0;iRNA_PseU:0 17472 chr9 131095147 131095147 1 + G A BLCA 131095146 + 131095126 131095166 41 CAGGGGAGATCGTGGTGAAATGGTTTGAGGCTGTCCAGACT CAGGGGAGATCGTGGTGAAATAGTTTGAGGCTGTCCAGACT < 41bp 0.432432330421715 0.841609805493252 0.20385948 0.3092462 prediction 0.683219610986505 Functional Gain - COQ4 ENSG00000167113 CDS Human protein_coding chr9:131095146 chr9:131095147 stopgain 0.998 1 22 hPsi_associated_SNPs_23748 0 0 1 0 2 Ribosome 0.438714570610343 0.438718718534212 0 0 hPsi_site_17472 iPseU_CNN:0;iRNA_PseU:0 17473 chr16 48329998 48329998 1 + C A COAD 48329997 + 48329977 48330017 41 GCCTTTGACCTTTCTCAAGTTCTTTTTATAGCTACTGCCAA GCCTTTGACCTTTCTCAAGTTATTTTTATAGCTACTGCCAA < 41bp 0.497260585268902 0.841597627368545 0.29106236 0.44805196 prediction 0.683195254737089 Functional Gain - LONP2 ENSG00000102910 CDS Human protein_coding chr16:48329997 chr16:48329998 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23749 0 0 0 1 2 Nucleus 0.438639574450633 0.438636887347627 0 0 hPsi_site_17473 iPseU_CNN:0;iRNA_PseU:0 17474 chr19 45418151 45418151 1 + G A BLCA 45418150 + 45418130 45418170 41 GTGCCCCTCCGGCCTCGCCATGAGGCTCTTCCTGTCGCTCC GTGCCCCTCCGGCCTCGCCATAAGGCTCTTCCTGTCGCTCC < 41bp 0.439751665931426 0.841593933919988 0.2717807 0.4064759 prediction 0.683187867839977 Functional Gain - APOC1 ENSG00000130208 CDS Human protein_coding chr19:45418150 chr19:45418151 nonsynonymous SNV 0.833 2 22 hPsi_associated_SNPs_23750 0 0 1 0 1 Endoplasmic reticulum 0.4381231846833 0.4387127593575 0 0 hPsi_site_17474 iPseU_CNN:0;iRNA_PseU:0 17475 chr9 136253238 136253238 1 + C A UCEC 136253237 + 136253217 136253257 41 TCCTGTCCCAGCAGATCTCTTCTCTGTACCTCTGCCTGGTG TCCTGTCCCAGCAGATCTCTTATCTGTACCTCTGCCTGGTG < 41bp 0.508217722847957 0.849811274110044 0.7223557 0.9121065 prediction 0.683187102524173 Functional Gain - STKLD1 ENSG00000198870 CDS Human protein_coding chr9:136253237 chr9:136253238 nonsynonymous SNV 0.923 1 22 hPsi_associated_SNPs_23751 0 0 0 0 2 nucleolus 0.43774463627216 0.44394929268084 0.3795016 0 hPsi_site_17475 iPseU_CNN:0.3795016;iRNA_PseU:0 17476 chr10 51892765 51892765 1 + G A rs565369598 51892764 + 51892744 51892784 41 TGTTGAGTTAGTGATGATGTTGTATATGCTGATGGTCTTAA TGTTGAGTTAGTGATGATGTTATATATGCTGATGGTCTTAA < 41bp 0.517110568003834 0.858703064690435 0.27362043 0.41768417 prediction 0.683184993373202 Functional Gain - WASHC2A ENSG00000099290 UTR3 Human protein_coding chr10:51892764 chr10:51892765 . . 0 22 hPsi_associated_SNPs_23752 0 0 0 0 0 unknown 0.438968746976099 0.438239767985479 0 0 hPsi_site_17476 iPseU_CNN:0;iRNA_PseU:0 17477 chr4 44688570 44688570 1 + G A COAD 44688569 + 44688549 44688589 41 CCTCTGAGAGCTTTGGTATTTGACTCCACCTTTGACCAGTA CCTCTGAGAGCTTTGGTATTTAACTCCACCTTTGACCAGTA < 41bp 0.547850182809229 0.889441526899686 0.22461465 0.43393692 prediction 0.683182688180915 Functional Gain - GUF1 ENSG00000151806 CDS Human protein_coding chr4:44688569 chr4:44688570 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23753 0 0 1 2 1 Ribosome 0.438718593000398 0.438718593005932 0 0 hPsi_site_17477 iPseU_CNN:0;iRNA_PseU:0 17478 chr19 48978169 48978169 1 + C A UCEC 48978168 + 48978148 48978188 41 GAATGACCTGACCCACACCTTCTTCAACCCGGACCGGGAGG GAATGACCTGACCCACACCTTATTCAACCCGGACCGGGAGG < 41bp 0.524760887682312 0.86635175242396 0.28179884 0.43693012 prediction 0.683181729483296 Functional Gain - CYTH2 ENSG00000105443 CDS Human protein_coding chr19:48978168 chr19:48978169 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23754 0 0 1 0 2 Ribosome 0.438298195802449 0.43870682945996 0 0 hPsi_site_17478 iPseU_CNN:0;iRNA_PseU:0 17479 chr10 72619143 72619143 1 + G A UCEC 72619142 + 72619122 72619162 41 TTGCAGGCTTATGGAGATTTTGCATGGAGTAACCCCCTGCA TTGCAGGCTTATGGAGATTTTACATGGAGTAACCCCCTGCA < 41bp 0.430879519646528 0.841590409534154 0.29366004 0.33079398 prediction 0.683180819068308 Functional Gain - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72619142 chr10:72619143 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_23755 0 0 1 0 1 Ribosome 0.438718673784814 0.438718633183131 0 0 hPsi_site_17479 iPseU_CNN:0;iRNA_PseU:0 17480 chr19 33467508 33467508 1 + G A UCEC 33467507 + 33467487 33467527 41 AGCATCCAGCAACTGAGTAATGCTTCCATTGGGGAACTGGA AGCATCCAGCAACTGAGTAATACTTCCATTGGGGAACTGGA < 41bp 0.544491377068874 0.886081011030786 0.30280554 0.5575813 prediction 0.683179267923825 Functional Gain - FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33467507 chr19:33467508 nonsynonymous SNV 0.891 3 22 hPsi_associated_SNPs_23756 0 0 1 0 0 cytosol 0.438470075251132 0.438059883701471 0.1151626 0 hPsi_site_17480 iPseU_CNN:0.1151626;iRNA_PseU:0 17481 chr9 139994264 139994264 1 + G A BLCA 139994263 + 139994243 139994283 41 CCTGTGTCCAGGTCCTTCAGTGAGTGGTTTGGCCTCGGTCT CCTGTGTCCAGGTCCTTCAGTAAGTGGTTTGGCCTCGGTCT < 41bp 0.535836483735941 0.877409558705495 0.28503323 0.50100607 prediction 0.683146149939108 Functional Gain - MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139994263 chr9:139994264 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_23757 0 0 1 0 1 Ribosome 0.438702074652511 0.438718592927363 0.00201213999999994 0 hPsi_site_17481 iPseU_CNN:0.00201213999999994;iRNA_PseU:0 17482 chr16 29815362 29815362 1 + G A STAD 29815361 + 29815341 29815381 41 AAATGCCGAGATCCACATCCTGAAGAATAAAGGCCGGAAGA AAATGCCGAGATCCACATCCTAAAGAATAAAGGCCGGAAGA < 41bp 0.436608273413721 0.841570959720834 0.30937555 0.8067585 prediction 0.683141919441669 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29815361 chr16:29815362 synonymous SNV . 0 22 hPsi_associated_SNPs_23758 0 0 1 0 2 Cytosol 0.438718592998504 0.438718592995073 0.613517 0 hPsi_site_17482 iPseU_CNN:0.613517;iRNA_PseU:0 17483 chr5 140558667 140558667 1 + C A GBM 140558666 + 140558646 140558686 41 ATGCCCCAGAAGTTACCATGTCTGCATTTACCAGCCCAATA ATGCCCCAGAAGTTACCATGTATGCATTTACCAGCCCAATA < 41bp 0.498317111722636 0.841570662099264 0.31331956 0.46348584 prediction 0.683141324198528 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140558666 chr5:140558667 nonsynonymous SNV 0.512 3 22 hPsi_associated_SNPs_23759 0 0 0 0 0 exosome 0.438716209273313 0.438795119795328 0 0 hPsi_site_17483 iPseU_CNN:0;iRNA_PseU:0 17484 chr5 33461093 33461093 1 + C A OV 33461092 + 33461072 33461112 41 TACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTC TACTTCATAGGAACGAGCTGTATGGAGCACTCACAGGACTC < 41bp 0.47709341824392 0.841568926124777 0.2370807 0.7131412 prediction 0.683137852249554 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33461092 chr5:33461093 nonsynonymous SNV 0.937 4 22 hPsi_associated_SNPs_23760 0 0 1 0 2 Nucleus 0.438658488920053 0.438719420828198 0.4262824 0 hPsi_site_17484 iPseU_CNN:0.4262824;iRNA_PseU:0 17485 chr11 65299109 65299109 1 + G A BLCA 65299108 + 65299088 65299128 41 CATCCCTGTGGTGGTCAAGATGTTCTCATCCACTGACCGGG CATCCCTGTGGTGGTCAAGATATTCTCATCCACTGACCGGG < 41bp 0.557741225928135 0.899305954627266 0.38597095 0.60306764 prediction 0.683129457398262 Functional Gain - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65299108 chr11:65299109 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23761 0 0 0 0 2 Ribosome 0.438166130556555 0.43871370274706 0.20613528 0 hPsi_site_17485 iPseU_CNN:0.20613528;iRNA_PseU:0 17486 chr16 2282269 2282269 1 + G A UCEC 2282268 + 2282248 2282288 41 CAGCCCCCGCCAGCAGGGGCTGGGGCTCGCAGGGGAGGGTG CAGCCCCCGCCAGCAGGGGCTAGGGCTCGCAGGGGAGGGTG < 41bp 0.440371030924438 0.841561875516956 0.18080619 0.30205506 prediction 0.683123751033912 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2282268 chr16:2282269 synonymous SNV . 0 22 hPsi_associated_SNPs_23762 0 0 1 0 2 chromatin 0.438718592995103 0.43871835387993 0 0 hPsi_site_17486 iPseU_CNN:0;iRNA_PseU:0 17487 chr6 160240334 160240334 1 + C A LUSC 160240333 + 160240313 160240353 41 GGACCACCCGACCCTGTGCATCTCCCTGTACCGCTACTGGA GGACCACCCGACCCTGTGCATATCCCTGTACCGCTACTGGA < 41bp 0.475532712433441 0.84156009630232 0.2527058 0.50437284 prediction 0.683120192604639 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160240333 chr6:160240334 synonymous SNV . 0 22 hPsi_associated_SNPs_23763 0 0 0 0 2 exosome 0.439343062851634 0.435112178561102 0.00874568000000009 0 hPsi_site_17487 iPseU_CNN:0.00874568000000009;iRNA_PseU:0 17488 chr17 30376229 30376229 1 + C A STAD 30376228 + 30376208 30376248 41 GGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGG GGACCTTGAAAATGGAATGTTAAGAAACACATGTGCAAGGG < 41bp 0.499364373437259 0.841556588595002 0.5984936 0.73176754 prediction 0.683113177190003 Functional Gain - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30376228 chr17:30376229 stopgain 0.008 0 22 hPsi_associated_SNPs_23764 0 0 0 0 0 chromatin 0.438534930193464 0.438718605364727 0.26654788 0 hPsi_site_17488 iPseU_CNN:0.26654788;iRNA_PseU:0 17489 chr19 42728645 42728645 1 + G A HNSC 42728644 + 42728624 42728664 41 AACACCTATGTCGGCAGAGATGATGGAGATGTCAACAGAAG AACACCTATGTCGGCAGAGATAATGGAGATGTCAACAGAAG < 41bp 0.462146918177284 0.841555086238022 0.3053794 0.37502939 prediction 0.683110172476044 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728644 chr19:42728645 nonsynonymous SNV 0.074 0 22 hPsi_associated_SNPs_23765 0 0 1 0 0 Cytosol 0.439991044461758 0.438719163522396 0 0 hPsi_site_17489 iPseU_CNN:0;iRNA_PseU:0 17490 chr11 66407597 66407597 1 + G A THCA 66407596 + 66407576 66407616 41 GATAACACAGAGTTTCAAGGTGAACCACCCTCTTTGGGTAG GATAACACAGAGTTTCAAGGTAAACCACCCTCTTTGGGTAG < 41bp 0.449443458900618 0.841552644729986 0.3937381 0.8009515 prediction 0.683105289459971 Functional Gain - RBM14-RBM4;RBM4 ENSG00000173933 CDS Human protein_coding chr11:66407596 chr11:66407597 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_23766 0 0 1 0 0 unknown 0.438718493877571 0.438718596291574 0.601903 0 hPsi_site_17490 iPseU_CNN:0.601903;iRNA_PseU:0 17491 chr17 72368061 72368061 1 + G A SKCM 72368060 + 72368040 72368080 41 GGTGCGCACGGCCAACATCCTGGAGTTTGCTGCCAACCACG GGTGCGCACGGCCAACATCCTAGAGTTTGCTGCCAACCACG < 41bp 0.436233386549057 0.841548219813997 0.3310777 0.58294356 prediction 0.683096439627994 Functional Gain - GPR142 ENSG00000257008 CDS Human protein_coding chr17:72368060 chr17:72368061 synonymous SNV . 0 22 hPsi_associated_SNPs_23767 0 0 0 0 0 exosome 0.437816007625801 0.438867166756807 0.16588712 0 hPsi_site_17491 iPseU_CNN:0.16588712;iRNA_PseU:0 17492 chr12 48539483 48539483 1 + G A LAML 48539482 + 48539462 48539502 41 CGGAAGCGGTCCGGGGAAGCTGCCGTCTAAACCTCTCTGGA CGGAAGCGGTCCGGGGAAGCTACCGTCTAAACCTCTCTGGA < 41bp 0.549444775007534 0.890987455918195 0.24462304 0.74920654 prediction 0.683085361821323 Functional Gain - PFKM ENSG00000152556 CDS Human protein_coding chr12:48539482 chr12:48539483 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_23768 0 0 1 0 0 Nucleus 0.438718603321494 0.438718755119901 0.49841308 0 hPsi_site_17492 iPseU_CNN:0.49841308;iRNA_PseU:0 17493 chr7 148427298 148427298 1 + C A PAAD 148427297 + 148427277 148427317 41 GGACGACCTCAGAGCCGGCATCCAGCAGGTGTACACACGGC GGACGACCTCAGAGCCGGCATACAGCAGGTGTACACACGGC < 41bp 0.486370624345588 0.841531445563474 0.2875951 0.5112069 prediction 0.683062891126949 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148427297 chr7:148427298 synonymous SNV . 0 22 hPsi_associated_SNPs_23769 0 0 1 0 1 Nucleus 0.43871840922581 0.438718507176672 0.0224138 0 hPsi_site_17493 iPseU_CNN:0.0224138;iRNA_PseU:0 17494 chr4 1389097 1389097 1 + G A SARC 1389096 + 1389076 1389116 41 CGCCTGCTCACACGTGCCCATGTGGAGTGCCCGCCTGCTCA CGCCTGCTCACACGTGCCCATATGGAGTGCCCGCCTGCTCA < 41bp 0.519018670948631 0.860549770563213 0.26586092 0.3143116 prediction 0.683062199229165 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389096 chr4:1389097 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23770 0 0 0 0 0 chromatin 0.437642407877856 0.438219317266111 0 0 hPsi_site_17494 iPseU_CNN:0;iRNA_PseU:0 17495 chr20 25656237 25656237 1 + G T OV 25656238 - 25656218 25656258 41 AAGGCAAATCTTCTTAGACATCAGTGGACACACTCGGGGGA AAGGCAAATCTTCTTAGACATAAGTGGACACACTCGGGGGA < 41bp 0.508369754015103 0.849897417171178 0.26049918 0.29198417 prediction 0.683055326312149 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656238 chr20:25656237 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_23771 0 0 1 0 0 Cytosol 0.438401456571397 0.438718572680429 0 0 hPsi_site_17495 iPseU_CNN:0;iRNA_PseU:0 17496 chr1 158435375 158435375 1 + G A SARC 158435374 + 158435354 158435394 41 GGAGCAAGTCAATAAGACTGTGGTGAGAGAGTTCGTCGTCC GGAGCAAGTCAATAAGACTGTAGTGAGAGAGTTCGTCGTCC < 41bp 0.473878831502306 0.841514235119589 0.2761145 0.64357436 prediction 0.683028470239178 Functional Gain - OR10K1 ENSG00000173285 CDS Human protein_coding chr1:158435374 chr1:158435375 synonymous SNV . 0 22 hPsi_associated_SNPs_23772 0 0 0 0 0 unknown 0.438718560619794 0.438713494130797 0.28714872 0 hPsi_site_17496 iPseU_CNN:0.28714872;iRNA_PseU:0 17497 chr11 5969509 5969509 1 + G A SKCM 5969508 + 5969488 5969528 41 GCAGGGAATGCAGAGGTTGTTGAAGAAAGGGTGCTAACAAG GCAGGGAATGCAGAGGTTGTTAAAGAAAGGGTGCTAACAAG < 41bp 0.516438735296709 0.857943549651176 0.32677826 0.52506906 prediction 0.683009628708934 Functional Gain - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5969508 chr11:5969509 synonymous SNV . 0 22 hPsi_associated_SNPs_23773 0 0 0 0 0 unknown 0.438719204772037 0.438718595094568 0.05013812 0 hPsi_site_17497 iPseU_CNN:0.05013812;iRNA_PseU:0 17498 chr11 93127693 93127693 1 + C A BLCA 93127692 + 93127672 93127712 41 GGAAAGAATGAGGAATGAAATCTCTGACCTAACAGAAGAGC GGAAAGAATGAGGAATGAAATATCTGACCTAACAGAAGAGC < 41bp 0.496459481959875 0.841502895131318 0.3548444 0.5053196 prediction 0.683005790262637 Functional Gain - DEUP1 ENSG00000165325 CDS Human protein_coding chr11:93127692 chr11:93127693 synonymous SNV . 0 22 hPsi_associated_SNPs_23774 0 0 0 0 1 unknown 0.438718749692806 0.438718559543026 0.0106392 0 hPsi_site_17498 iPseU_CNN:0.0106392;iRNA_PseU:0 17499 chr17 37213373 37213373 1 + G A UCEC 37213372 + 37213352 37213392 41 GAGTGACAAAACCTTGCTAGTGTGGGAGCTGAGCTCTGGAC GAGTGACAAAACCTTGCTAGTATGGGAGCTGAGCTCTGGAC < 41bp 0.530761020732469 0.872258383074388 0.338722 0.5973093 prediction 0.682994724683839 Functional Gain - LOC100131347 ENSG00000263818 ncRNA_exonic Human transcribed_processed_pseudogene chr17:37213372 chr17:37213373 . . 0 22 hPsi_associated_SNPs_23775 0 0 1 0 1 unknown 0.438783818767283 0.438966408465268 0.1946186 0 hPsi_site_17499 iPseU_CNN:0.1946186;iRNA_PseU:0 17500 chr19 58966932 58966932 1 + C A UCEC 58966931 + 58966911 58966951 41 GGAGGTCCCTGGGAGAGCCTTCGGGAATGCCTCGGACCTGA GGAGGTCCCTGGGAGAGCCTTAGGGAATGCCTCGGACCTGA < 41bp 0.496231146368091 0.841493436659942 0.345074 0.39505658 prediction 0.682986873319884 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58966931 chr19:58966932 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_23776 0 0 0 0 0 exosome 0.438718780375639 0.438718592594229 0 0 hPsi_site_17500 iPseU_CNN:0;iRNA_PseU:0 17501 chr9 107533246 107533246 1 + G A STAD 107533245 + 107533225 107533265 41 GGCTACACAAAAGTAGTTGGTGTTTTCCACACAGAATATGG GGCTACACAAAAGTAGTTGGTATTTTCCACACAGAATATGG < 41bp 0.455417322888398 0.841492453598504 0.2510945 0.7707019 prediction 0.682984907197009 Functional Gain - NIPSNAP3B ENSG00000165028 CDS Human protein_coding chr9:107533245 chr9:107533246 nonsynonymous SNV 0.969 2 22 hPsi_associated_SNPs_23777 0 0 0 0 1 exosome 0.438718445510169 0.438718818833402 0.5414038 0 hPsi_site_17501 iPseU_CNN:0.5414038;iRNA_PseU:0 17502 chr12 32884840 32884840 1 + G A PAAD 32884839 + 32884819 32884859 41 CCATAGTTGAAGTGGTGACTTGTCTTCTTCGTAAAAGGTTG CCATAGTTGAAGTGGTGACTTATCTTCTTCGTAAAAGGTTG < 41bp 0.54014383769402 0.881635525751159 0.2836693 0.30723527 prediction 0.682983376114278 Functional Gain - DNM1L ENSG00000087470 CDS Human protein_coding chr12:32884839 chr12:32884840 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23778 0 0 1 0 2 Ribosome 0.438718792381982 0.438718574855532 0 0 hPsi_site_17502 iPseU_CNN:0;iRNA_PseU:0 17503 chr2 171806730 171806730 1 + C A UCEC 171806729 + 171806709 171806749 41 TCTAGGAGGTGGAATCAAATTCTCCTGCAGCACTGGCAGGT TCTAGGAGGTGGAATCAAATTATCCTGCAGCACTGGCAGGT < 41bp 0.490879508900513 0.841488028811384 0.46728733 0.57608163 prediction 0.682976057622768 Functional Gain - GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171806729 chr2:171806730 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23779 0 0 1 0 2 Ribosome 0.438718601419857 0.438709995835737 0.15216326 0 hPsi_site_17503 iPseU_CNN:0.15216326;iRNA_PseU:0 17504 chr9 125563230 125563230 1 + G A LGG 125563229 + 125563209 125563249 41 GAGTGGGGCCGTGTGGCCACTGTCATGTACACTGTAGTCAC GAGTGGGGCCGTGTGGCCACTATCATGTACACTGTAGTCAC < 41bp 0.530473925421213 0.871955643408639 0.2851022 0.52269876 prediction 0.682963435974852 Functional Gain - OR1K1 ENSG00000165204 CDS Human protein_coding chr9:125563229 chr9:125563230 nonsynonymous SNV 0.846 0 22 hPsi_associated_SNPs_23780 0 0 0 0 0 unknown 0.438713576744497 0.438717247624693 0.0453975200000001 0 hPsi_site_17504 iPseU_CNN:0.0453975200000001;iRNA_PseU:0 17505 chr12 53427646 53427646 1 + G A CESC 53427645 + 53427625 53427665 41 CGGAGTACTCCTAAGGAAGATGATTCCTCTGCTAGTACCTC CGGAGTACTCCTAAGGAAGATAATTCCTCTGCTAGTACCTC < 41bp 0.552898128591389 0.894366841889163 0.28418237 0.3711809 prediction 0.682937426595548 Functional Gain - EIF4B ENSG00000063046 CDS Human protein_coding chr12:53427645 chr12:53427646 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23781 0 0 0 0 1 Cytosol 0.438718594217017 0.43871859310873 0 0 hPsi_site_17505 iPseU_CNN:0;iRNA_PseU:0 17506 chr16 2821184 2821184 1 + G A rs574378496 2821183 + 2821163 2821203 41 CAGGGAGGCATGGCCCCACTTGTATCCAGAAGTTCCCAGGG CAGGGAGGCATGGCCCCACTTATATCCAGAAGTTCCCAGGG < 41bp 0.509094816654065 0.85056056978361 0.2811486 0.33847213 prediction 0.682931506259091 Functional Gain - SRRM2 ENSG00000167978 UTR3 Human protein_coding chr16:2821183 chr16:2821184 . . 0 22 hPsi_associated_SNPs_23782 0 0 1 0 0 Nucleus 0.438718626810676 0.438718601164582 0 0 hPsi_site_17506 iPseU_CNN:0;iRNA_PseU:0 17507 chr22 35463167 35463167 1 + G A rs181803035 35463166 + 35463146 35463186 41 GGCCCCGAAGAAGCTGAGCCTGTCCTTCTCCATTGAGGCGA GGCCCCGAAGAAGCTGAGCCTATCCTTCTCCATTGAGGCGA < 41bp 0.455353327638222 0.841464969943519 0.2485325 0.28107893 prediction 0.682929939887037 Functional Gain - ISX ENSG00000175329 CDS Human protein_coding chr22:35463166 chr22:35463167 synonymous SNV . 0 22 hPsi_associated_SNPs_23783 0 0 0 0 0 chromatin 0.438718583111871 0.438718592331054 0 0 hPsi_site_17507 iPseU_CNN:0;iRNA_PseU:0 17508 chr8 99963803 99963803 1 + G A UCEC 99963802 + 99963782 99963822 41 CTTTAATCAGAGAAGTAATCTGAAAACTCACCTTCTCACCC CTTTAATCAGAGAAGTAATCTAAAAACTCACCTTCTCACCC < 41bp 0.537425015701312 0.878889836394863 0.24003035 0.26885617 prediction 0.682929641387102 Functional Gain - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99963802 chr8:99963803 synonymous SNV . 0 22 hPsi_associated_SNPs_23784 0 0 0 0 1 exosome 0.438718578600553 0.438745521147 0 0 hPsi_site_17508 iPseU_CNN:0;iRNA_PseU:0 17509 chr17 32964693 32964693 1 + C A LUSC 32964692 + 32964672 32964712 41 GGGTCTGACAGACCTGGAGATCGGCATGTACGCGCTGCTGG GGGTCTGACAGACCTGGAGATAGGCATGTACGCGCTGCTGG < 41bp 0.495124458436888 0.841459739366751 0.22934917 0.38507167 prediction 0.682919478733502 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32964692 chr17:32964693 synonymous SNV . 0 22 hPsi_associated_SNPs_23785 0 0 0 0 0 exosome 0.435781876155 0.438690022882675 0 0 hPsi_site_17509 iPseU_CNN:0;iRNA_PseU:0 17510 chr14 90650957 90650957 1 + C A UCEC 90650956 + 90650936 90650976 41 CTACTCCTTGTTCAATGTCATCTCTATCCTCATCAAACAGT CTACTCCTTGTTCAATGTCATATCTATCCTCATCAAACAGT < 41bp 0.50810995697792 0.84956759989256 0.24619713 0.5436515 prediction 0.68291528582928 Functional Gain - KCNK13 ENSG00000152315 CDS Human protein_coding chr14:90650956 chr14:90650957 synonymous SNV . 0 22 hPsi_associated_SNPs_23786 0 0 0 0 0 exosome 0.438588986286237 0.438565039710938 0.0873029999999999 0 hPsi_site_17510 iPseU_CNN:0.0873029999999999;iRNA_PseU:0 17511 chr19 18305619 18305619 1 + G A UCEC 18305618 + 18305598 18305638 41 CTGGAGGGTCAGACAGTGGGTGAGAGCTGCCAGGAGCTGCG CTGGAGGGTCAGACAGTGGGTAAGAGCTGCCAGGAGCTGCG < 41bp 0.470154678883539 0.841454612923278 0.24127108 0.34858316 prediction 0.682909225846557 Functional Gain - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18305618 chr19:18305619 nonsynonymous SNV 0.131 1 22 hPsi_associated_SNPs_23787 0 0 1 0 2 Ribosome 0.438718520094235 0.438718592995102 0 0 hPsi_site_17511 iPseU_CNN:0;iRNA_PseU:0 17512 chr1 147096112 147096112 1 + G A rs61751618 147096111 + 147096091 147096131 41 CACTGTCCTGGGGAACAGCATGCCTTCGGTGTTTACAGACC CACTGTCCTGGGGAACAGCATACCTTCGGTGTTTACAGACC < 41bp 0.546927234272147 0.888374640373148 0.28943586 0.41801748 prediction 0.682894812202002 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147096111 chr1:147096112 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23788 0 0 1 0 0 Nucleus 0.438745615208385 0.438724694958238 0 0 hPsi_site_17512 iPseU_CNN:0;iRNA_PseU:0 17513 chr15 85341659 85341659 1 + G A LGG 85341658 + 85341638 85341678 41 GCGTCTTCAAGTGCCCTGAGTGCCCACTCTTGTTCGTGCAG GCGTCTTCAAGTGCCCTGAGTACCCACTCTTGTTCGTGCAG < 41bp 0.445192979653326 0.841445633785386 0.20103309 0.2958659 prediction 0.682891267570773 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85341658 chr15:85341659 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_23789 0 0 1 0 1 Cytosol 0.4387185911189 0.438717482775731 0 0 hPsi_site_17513 iPseU_CNN:0;iRNA_PseU:0 17514 chr9 139617470 139617470 1 + G A rs79974881 139617469 + 139617449 139617489 41 GGTTGGCCAGGTCCTGCTCATGGCTGACTTCAACAAGGACA GGTTGGCCAGGTCCTGCTCATAGCTGACTTCAACAAGGACA < 41bp 0.545740202801754 0.887185599675369 0.2494989 0.39729065 prediction 0.68289079374723 Functional Gain - FAM69B ENSG00000165716 CDS Human protein_coding chr9:139617469 chr9:139617470 nonsynonymous SNV 0.932 1 22 hPsi_associated_SNPs_23790 0 0 1 0 1 chromatin 0.438718592987918 0.438718599876964 0 0 hPsi_site_17514 iPseU_CNN:0;iRNA_PseU:0 17515 chr19 1043410 1043410 1 + C A UCEC 1043409 + 1043389 1043429 41 CTCTGGAGACGCCTGAAGCCTCTGATCCTCGGGAAGCTACT CTCTGGAGACGCCTGAAGCCTATGATCCTCGGGAAGCTACT < 41bp 0.498866240382613 0.841441144964616 0.17299622 0.23226035 prediction 0.682882289929232 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1043409 chr19:1043410 nonsynonymous SNV 0.028 4 22 hPsi_associated_SNPs_23791 0 0 1 0 2 Endoplasmic reticulum 0.438719500476739 0.438718593693557 0 0 hPsi_site_17515 iPseU_CNN:0;iRNA_PseU:0 17516 chr17 42386203 42386203 1 + G A COAD 42386202 + 42386182 42386222 41 GCAGTGGCCGCACATCTGGATGGAAGCGAGCTTTGTCCAGA GCAGTGGCCGCACATCTGGATAGAAGCGAGCTTTGTCCAGA < 41bp 0.524664874337826 0.866105768597142 0.3186099 0.73022753 prediction 0.682881788518632 Functional Gain - RUNDC3A ENSG00000108309 CDS Human protein_coding chr17:42386202 chr17:42386203 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23792 0 0 0 0 0 Cytosol 0.438636742681976 0.441173534230412 0.46045506 0 hPsi_site_17516 iPseU_CNN:0.46045506;iRNA_PseU:0 17517 chr22 31011397 31011397 1 + C A UCEC 31011396 + 31011376 31011416 41 CAGAACAGTGCGAGAGGAGATCTTGAAGGCCCAGACCCCCG CAGAACAGTGCGAGAGGAGATATTGAAGGCCCAGACCCCCG < 41bp 0.473927068516623 0.841439732684814 0.4927034 0.66858417 prediction 0.682879465369627 Functional Gain - TCN2 ENSG00000185339 CDS Human protein_coding chr22:31011396 chr22:31011397 synonymous SNV . 0 22 hPsi_associated_SNPs_23793 0 0 0 0 1 Endoplasmic reticulum 0.438717927943143 0.438718566169389 0.33716834 0 hPsi_site_17517 iPseU_CNN:0.33716834;iRNA_PseU:0 17518 chr16 3707262 3707262 1 + G A rs8176920 3707261 + 3707241 3707281 41 CCAGTGGTCATCCATCCGCCTGTGGACAAGCCCCACCTTCC CCAGTGGTCATCCATCCGCCTATGGACAAGCCCCACCTTCC < 41bp 0.420945515367437 0.841437290121695 0.28666937 0.63155556 prediction 0.68287458024339 Functional Gain - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707261 chr16:3707262 synonymous SNV . 0 22 hPsi_associated_SNPs_23794 0 0 1 0 2 Cytosol 0.438745696785973 0.43871583235645 0.26311112 0 hPsi_site_17518 iPseU_CNN:0.26311112;iRNA_PseU:0 17519 chr19 6744697 6744697 1 + G A UCEC 6744696 + 6744676 6744716 41 ATGAAGGTGGCTGCAAATGCTGTGGATCCCAAGAACGTGGG ATGAAGGTGGCTGCAAATGCTATGGATCCCAAGAACGTGGG < 41bp 0.551437563838986 0.892874706500708 0.50194526 0.6447723 prediction 0.682874285323445 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744696 chr19:6744697 nonsynonymous SNV 0.565 4 22 hPsi_associated_SNPs_23795 0 0 1 0 1 Ribosome 0.43910711876274 0.439012220846867 0.28565408 0 hPsi_site_17519 iPseU_CNN:0.28565408;iRNA_PseU:0 17520 chr17 72927220 72927220 1 + C A UCEC 72927219 + 72927199 72927239 41 GCCAGTGCCTAAAAGACATTTCTCTGTTTCTCCTACTCTGC GCCAGTGCCTAAAAGACATTTATCTGTTTCTCCTACTCTGC < 41bp 0.513724469279352 0.855161473726195 0.29408208 0.32791442 prediction 0.682874008893686 Functional Gain - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72927219 chr17:72927220 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_23796 0 0 0 0 1 exosome 0.438722998368564 0.438723457968109 0 0 hPsi_site_17520 iPseU_CNN:0;iRNA_PseU:0 17521 chr6 168440843 168440843 1 + C A UCEC 168440842 + 168440822 168440862 41 TGCACGCGGATTCCTCCAGGTCTCACCTGATAATTACGGTG TGCACGCGGATTCCTCCAGGTATCACCTGATAATTACGGTG < 41bp 0.521830940400089 0.86326757627447 0.19057292 0.5244197 prediction 0.682873271748762 Functional Gain - KIF25 ENSG00000125337 CDS Human protein_coding chr6:168440842 chr6:168440843 nonsynonymous SNV 0.021 5 22 hPsi_associated_SNPs_23797 0 0 0 0 2 exosome 0.438716610951775 0.438641451599083 0.0488394000000001 0 hPsi_site_17521 iPseU_CNN:0.0488394000000001;iRNA_PseU:0 17522 chr3 52522532 52522532 1 + G A CESC 52522531 + 52522511 52522551 41 GCGGGCCTCGCTGCAGGACCTGAAGACTGTGGTCATCGCCA GCGGGCCTCGCTGCAGGACCTAAAGACTGTGGTCATCGCCA < 41bp 0.457050771505872 0.84142049705645 0.31801397 0.41616824 prediction 0.682840994112899 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52522531 chr3:52522532 synonymous SNV . 0 22 hPsi_associated_SNPs_23798 0 0 1 0 1 Cytosol 0.438719311485708 0.438719981784648 0 0 hPsi_site_17522 iPseU_CNN:0;iRNA_PseU:0 17523 chr7 2696040 2696040 1 + G A LUAD 2696039 + 2696019 2696059 41 CCCACGGCCTCAGGACTACGTGCAAGCGCTGACCGGCTTCT CCCACGGCCTCAGGACTACGTACAAGCGCTGACCGGCTTCT < 41bp 0.433210654841821 0.84141571765781 0.35357583 0.6405278 prediction 0.68283143531562 Functional Gain - TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2696039 chr7:2696040 synonymous SNV . 0 22 hPsi_associated_SNPs_23799 0 0 1 0 1 Ribosome 0.440053052607603 0.438944258900776 0.2810556 0 hPsi_site_17523 iPseU_CNN:0.2810556;iRNA_PseU:0 17524 chr15 76462186 76462186 1 + C A UCS 76462185 + 76462165 76462205 41 ACGGATTGTGGTGCTTGGGATCTGGGATTACATCGAAAACA ACGGATTGTGGTGCTTGGGATATGGGATTACATCGAAAACA < 41bp 0.487760603514658 0.84141561402786 0.22192585 0.29825068 prediction 0.68283122805572 Functional Gain - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76462185 chr15:76462186 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23800 0 0 0 0 2 Nucleus 0.438724975666441 0.438636848086942 0 0 hPsi_site_17524 iPseU_CNN:0;iRNA_PseU:0 17525 chrX 16853790 16853790 1 + G A rs185662140 16853789 + 16853769 16853809 41 GTCACCATCGTAGCTTCTGTTGTCTGTGATCTGTACCACTC GTCACCATCGTAGCTTCTGTTATCTGTGATCTGTACCACTC < 41bp 0.46668349090069 0.841413012345969 0.30904767 0.65700823 prediction 0.682826024691938 Functional Gain - TXLNG ENSG00000086712 intronic Human protein_coding chrX:16853789 chrX:16853790 . . 0 22 hPsi_associated_SNPs_23801 0 0 1 0 0 chromatin 0.438267269162988 0.438776514407466 0.31401646 0 hPsi_site_17525 iPseU_CNN:0.31401646;iRNA_PseU:0 17526 chr22 25301124 25301124 1 + C A UCEC 25301123 + 25301103 25301143 41 GTCCAGGGCATGTGTGATCTTCTGGCTCCACTGCTGGTCAT GTCCAGGGCATGTGTGATCTTATGGCTCCACTGCTGGTCAT < 41bp 0.488046003814212 0.841409817939922 0.38887948 0.66735613 prediction 0.682819635879844 Functional Gain - SGSM1 ENSG00000167037 CDS Human protein_coding chr22:25301123 chr22:25301124 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_23802 0 0 0 0 2 exosome 0.438718609610563 0.43871863754898 0.33471226 0 hPsi_site_17526 iPseU_CNN:0.33471226;iRNA_PseU:0 17527 chr19 803583 803583 1 + C A OV 803582 + 803562 803602 41 GGGGATCTGACGAGCTTTTCTCTACTTGTGTCACTAACGGA GGGGATCTGACGAGCTTTTCTATACTTGTGTCACTAACGGA < 41bp 0.514319190508828 0.855726989276973 0.22692898 0.27307373 prediction 0.68281559753629 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803582 chr19:803583 nonsynonymous SNV 0.397 3 22 hPsi_associated_SNPs_23803 0 0 1 0 2 Cytosol 0.438716577889719 0.438718592333551 0 0 hPsi_site_17527 iPseU_CNN:0;iRNA_PseU:0 17528 chr7 99655353 99655353 1 + G A rs374606578 99655352 + 99655332 99655372 41 TCCAAACGAACAGAAACCGGTGTGGGAGAAGATATCCTCCT TCCAAACGAACAGAAACCGGTATGGGAGAAGATATCCTCCT < 41bp 0.434996867201002 0.841401277838715 0.43843848 0.7807276 prediction 0.682802555677429 Functional Gain - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99655352 chr7:99655353 synonymous SNV . 0 22 hPsi_associated_SNPs_23804 0 0 1 0 1 chromatin 0.438711471946798 0.438718558291167 0.5614552 0 hPsi_site_17528 iPseU_CNN:0.5614552;iRNA_PseU:0 17529 chr3 196295996 196295996 1 + G A rs181391937 196295995 + 196295975 196296015 41 CAGCCGGGTGCTGGAGTTGGTGTTCTCTTACCTGGAGCTGT CAGCCGGGTGCTGGAGTTGGTATTCTCTTACCTGGAGCTGT < 41bp 0.462435468748919 0.841399345985813 0.72855985 0.950115 prediction 0.682798691971626 Functional Gain - FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196295995 chr3:196295996 synonymous SNV . 0 22 hPsi_associated_SNPs_23805 0 0 1 0 0 Cytosol 0.438718867867454 0.438717294235968 0.4431103 0 hPsi_site_17529 iPseU_CNN:0.4431103;iRNA_PseU:0 17530 chr5 164028140 164028140 1 + G A SKCM 164028139 + 164028119 164028159 41 CAGCTTGATCTCCACCTGGTTGAAGGTCTTGCCGTTGTAGA CAGCTTGATCTCCACCTGGTTAAAGGTCTTGCCGTTGTAGA < 41bp 0.49260874216636 0.841390467333689 0.3676215 0.78613615 prediction 0.682780934667377 Functional Gain - LOC102546299;NONE ENSG00000241956;ENSG00000253600 ncRNA_exonic Human other chr5:164028139 chr5:164028140 . . 0 22 hPsi_associated_SNPs_23806 0 0 0 0 0 unknown 0.436157292790779 0.438718522663576 0.5722723 0 hPsi_site_17530 iPseU_CNN:0.5722723;iRNA_PseU:0 17531 chr1 153737475 153737475 1 + C A CESC 153737474 + 153737454 153737494 41 TTCTCTCTACTTCTAGACCTTCTCTCCGAGCTATATCAGAA TTCTCTCTACTTCTAGACCTTATCTCCGAGCTATATCAGAA < 41bp 0.486078260993397 0.841381235173529 0.30862892 0.56672555 prediction 0.682762470347058 Functional Gain - INTS3 ENSG00000143624 CDS Human protein_coding chr1:153737474 chr1:153737475 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_23807 0 0 1 0 2 chromatin 0.43886040402873 0.438684668682068 0.1334511 0 hPsi_site_17531 iPseU_CNN:0.1334511;iRNA_PseU:0 17532 chr7 150070156 150070156 1 + G A rs183206903 150070155 + 150070135 150070175 41 AATGGGAATCCTAGAGGGGATGGAAGACGCGGGGAGTGAGC AATGGGAATCCTAGAGGGGATAGAAGACGCGGGGAGTGAGC < 41bp 0.478118081879868 0.841378329351641 0.28577834 0.34523425 prediction 0.682756658703281 Functional Gain - REPIN1 ENSG00000214022 UTR3 Human protein_coding chr7:150070155 chr7:150070156 . . 0 22 hPsi_associated_SNPs_23808 0 0 1 0 0 Endoplasmic reticulum 0.438718592993897 0.438718788953969 0 0 hPsi_site_17532 iPseU_CNN:0;iRNA_PseU:0 17533 chr4 73013119 73013119 1 + C A UCEC 73013118 + 73013098 73013138 41 ATTGTGGCCCTGCTTTTTATTCTCTCATGGCTGCCCCTGTG ATTGTGGCCCTGCTTTTTATTATCTCATGGCTGCCCCTGTG < 41bp 0.516325865196933 0.857702324276356 0.6794908 0.72726494 prediction 0.682752918158847 Functional Gain - NPFFR2 ENSG00000056291 CDS Human protein_coding chr4:73013118 chr4:73013119 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_23809 0 0 0 0 0 nucleoplasm 0.438718773875557 0.438389223893909 0.09554828 0 hPsi_site_17533 iPseU_CNN:0.09554828;iRNA_PseU:0 17534 chr19 52327382 52327382 1 + C A LUSC 52327381 + 52327361 52327401 41 TCTGGACCGCTGTATTTGTGTCCTGCATCCAGCCTGGGCCC TCTGGACCGCTGTATTTGTGTACTGCATCCAGCCTGGGCCC < 41bp 0.521775607387792 0.863152033823293 0.25746286 0.6862076 prediction 0.682752852871002 Functional Gain - FPR3 ENSG00000187474 CDS Human protein_coding chr19:52327381 chr19:52327382 synonymous SNV . 0 22 hPsi_associated_SNPs_23810 0 0 0 0 0 cytosol 0.438707440459769 0.435948953122482 0.3724152 0 hPsi_site_17534 iPseU_CNN:0.3724152;iRNA_PseU:0 17535 chr17 73517492 73517492 1 + C A UCEC 73517491 + 73517471 73517511 41 CGCTGTTCTCACCCCACAGCTCTGTCCTGTCCCCGTATGAG CGCTGTTCTCACCCCACAGCTATGTCCTGTCCCCGTATGAG < 41bp 0.508910340431833 0.850283897497898 0.5525783 0.79147995 prediction 0.68274711413213 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517491 chr17:73517492 nonsynonymous SNV 0.339 1 22 hPsi_associated_SNPs_23811 0 0 1 0 2 Cytosol 0.438974709483775 0.43871869257144 0.4778033 0 hPsi_site_17535 iPseU_CNN:0.4778033;iRNA_PseU:0 17536 chr1 15546198 15546198 1 + G A CESC 15546197 + 15546177 15546217 41 ACTCCTCCACCGCAGTATGATGAAGTCCAGGAGAAGGCCCC ACTCCTCCACCGCAGTATGATAAAGTCCAGGAGAAGGCCCC < 41bp 0.550201889596862 0.891567150459228 0.39088705 0.7683364 prediction 0.682730521724732 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15546197 chr1:15546198 nonsynonymous SNV 0.128 2 22 hPsi_associated_SNPs_23812 0 0 1 2 0 cytosol 0.43867863037794 0.438718588649207 0.5366728 0 hPsi_site_17536 iPseU_CNN:0.5366728;iRNA_PseU:0 17537 chr15 58465346 58465346 1 + G A SKCM 58465345 + 58465325 58465365 41 GTTCAAATTGCCATTTTATGTGGGAGCCCAGTTCTTGGGAG GTTCAAATTGCCATTTTATGTAGGAGCCCAGTTCTTGGGAG < 41bp 0.448038240828387 0.841364908078245 0.24513397 0.27726644 prediction 0.682729816156491 Functional Gain - AQP9 ENSG00000103569 CDS Human protein_coding chr15:58465345 chr15:58465346 synonymous SNV . 0 22 hPsi_associated_SNPs_23813 0 0 0 0 2 Ribosome 0.438718592994452 0.438718571442404 0 0 hPsi_site_17537 iPseU_CNN:0;iRNA_PseU:0 17538 chr21 45713694 45713694 1 + G A LGG 45713693 + 45713673 45713713 41 ACCTGGCTCCTGGTGCGCGTTGCGGGGTGTGCGGAGATGGT ACCTGGCTCCTGGTGCGCGTTACGGGGTGTGCGGAGATGGT < 41bp 0.442797204842014 0.841363731740319 0.25988483 0.8186589 prediction 0.682727463480639 Functional Gain - AIRE ENSG00000160224 CDS Human protein_coding chr21:45713693 chr21:45713694 nonsynonymous SNV 0.173 4 22 hPsi_associated_SNPs_23814 0 0 0 0 2 exosome 0.438654474386744 0.438694037432482 0.6373178 0 hPsi_site_17538 iPseU_CNN:0.6373178;iRNA_PseU:0 17539 chrX 106171614 106171614 1 + G A SKCM 106171613 + 106171593 106171633 41 CTTCTCCAAGGGCCTCTGGATGGAATGTGCCACACACAGCA CTTCTCCAAGGGCCTCTGGATAGAATGTGCCACACACAGCA < 41bp 0.549483634767381 0.890846462277549 0.27551952 0.67534786 prediction 0.682725655020336 Functional Gain - CLDN2 ENSG00000165376 CDS Human protein_coding chrX:106171613 chrX:106171614 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23815 0 0 0 0 0 Ribosome 0.438718355973303 0.438721825431421 0.35069572 0 hPsi_site_17539 iPseU_CNN:0.35069572;iRNA_PseU:0 17540 chr18 3255818 3255818 1 + G A BLCA 3255817 + 3255797 3255837 41 TTTACAGATGAGGAAGTGGATGAGCTGTACAGAGAAGCACC TTTACAGATGAGGAAGTGGATAAGCTGTACAGAGAAGCACC < 41bp 0.460875196481305 0.841358791133985 0.31820503 0.6628349 prediction 0.682717582267969 Functional Gain - MYL12A ENSG00000101608 CDS Human protein_coding chr18:3255817 chr18:3255818 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_23816 0 0 1 0 1 Ribosome 0.438835922467416 0.43872695590716 0.3256698 0 hPsi_site_17540 iPseU_CNN:0.3256698;iRNA_PseU:0 17541 chr18 2608738 2608738 1 + G A BLCA 2608737 + 2608717 2608757 41 GAAAAATGTGCCAGTGAGCTTGAGTCCTTGGAGAAACACAA GAAAAATGTGCCAGTGAGCTTAAGTCCTTGGAGAAACACAA < 41bp 0.547947605451707 0.889303476021468 0.5376531 0.6907438 prediction 0.682711741139523 Functional Gain - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2608737 chr18:2608738 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23817 0 0 1 0 2 Cytosol 0.438718799732241 0.438718592911018 0.3061814 0 hPsi_site_17541 iPseU_CNN:0.3061814;iRNA_PseU:0 17542 chrX 27839568 27839568 1 + G A UCEC 27839567 + 27839547 27839587 41 GCCTCTGCTTGTTTGAAGGATGTTTTCCAGAGTTCACTTGA GCCTCTGCTTGTTTGAAGGATATTTTCCAGAGTTCACTTGA < 41bp 0.538547432951718 0.879903161776648 0.31529397 0.5824938 prediction 0.68271145764986 Functional Gain - MAGEB10 ENSG00000177689 CDS Human protein_coding chrX:27839567 chrX:27839568 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_23818 0 0 0 0 0 Nucleus 0.438691519100392 0.438713504726716 0.1649876 0 hPsi_site_17542 iPseU_CNN:0.1649876;iRNA_PseU:0 17543 chr10 11894115 11894115 1 + G A SKCM 11894114 + 11894094 11894134 41 GAAATCAGACGCATCTGACATGAACTCAGACACGTCCCCCA GAAATCAGACGCATCTGACATAAACTCAGACACGTCCCCCA < 41bp 0.557046082559267 0.898386376634773 0.2602973 0.46549836 prediction 0.682680588151012 Functional Gain - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11894114 chr10:11894115 nonsynonymous SNV 0.177 1 22 hPsi_associated_SNPs_23819 0 0 1 0 1 chromatin 0.438718766457037 0.438719927459856 0 0 hPsi_site_17543 iPseU_CNN:0;iRNA_PseU:0 17544 chr17 56772522 56772522 1 + G A rs61758784 56772521 + 56772501 56772541 41 AAAACAACAGAAATTTGTGGTGCACCAGGTGTTGGAAAAAC AAAACAACAGAAATTTGTGGTACACCAGGTGTTGGAAAAAC < 41bp 0.474704671575395 0.841340292171175 0.27123576 0.64598304 prediction 0.68268058434235 Functional Gain - RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772521 chr17:56772522 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23820 4 0 1 1 1 Cytosol 0.438718593009481 0.438718594791886 0.29196608 0 hPsi_site_17544 iPseU_CNN:0.29196608;iRNA_PseU:0 17545 chr3 101572228 101572228 1 + G A rs35313454 101572227 + 101572207 101572247 41 AATGATAGACCAGGCTTCCCTGTACCAGTATTCTCCACAGA AATGATAGACCAGGCTTCCCTATACCAGTATTCTCCACAGA < 41bp 0.431586394795758 0.841333195213122 0.20679799 0.32430947 prediction 0.682666390426243 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101572227 chr3:101572228 synonymous SNV . 0 22 hPsi_associated_SNPs_23821 0 0 0 0 0 Endoplasmic reticulum 0.439524212439132 0.438812078110454 0 0 hPsi_site_17545 iPseU_CNN:0;iRNA_PseU:0 17546 chr10 85972023 85972023 1 + G A UCEC 85972022 + 85972002 85972042 41 ACTGCCAGGTACAACTTCTATGTGAAGGCAGAGGACATGGA ACTGCCAGGTACAACTTCTATATGAAGGCAGAGGACATGGA < 41bp 0.558794271664354 0.900127240719736 0.31134647 0.3458264 prediction 0.682665938110764 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85972022 chr10:85972023 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_23822 0 0 0 0 1 cytosol 0.438718637680752 0.43871907289557 0 0 hPsi_site_17546 iPseU_CNN:0;iRNA_PseU:0 17547 chr1 158815410 158815410 1 + G A rs201321344 158815409 + 158815389 158815429 41 CAGGCCCAACGGCAGGTGGATGCAAGAAGAAATGTTCCCCA CAGGCCCAACGGCAGGTGGATACAAGAAGAAATGTTCCCCA < 41bp 0.542782252375109 0.884114830809291 0.3810396 0.8069035 prediction 0.682665156868363 Functional Gain - MNDA ENSG00000163563 CDS Human protein_coding chr1:158815409 chr1:158815410 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23823 0 0 0 0 1 exosome 0.438717017833462 0.438718605823553 0.613807 0 hPsi_site_17547 iPseU_CNN:0.613807;iRNA_PseU:0 17548 chr2 179404371 179404371 1 + G A BLCA 179404370 + 179404350 179404390 41 CCTCACAGAGCGGACTTGGATGTCATCATATTCCAGTGGCC CCTCACAGAGCGGACTTGGATATCATCATATTCCAGTGGCC < 41bp 0.506705554644512 0.848037155566233 0.22892156 0.3760025 prediction 0.682663201843444 Functional Gain - TTN ENSG00000155657 CDS Human protein_coding chr2:179404370 chr2:179404371 synonymous SNV . 0 22 hPsi_associated_SNPs_23824 0 0 1 0 0 Nucleus 0.43910997889263 0.438828695514434 0 0 hPsi_site_17548 iPseU_CNN:0;iRNA_PseU:0 17549 chr5 176070173 176070173 1 + C A LIHC 176070172 + 176070152 176070192 41 ACGCCCACAGGAGAAAAGTCTCCAAACTCTCCCAGGACTTT ACGCCCACAGGAGAAAAGTCTACAAACTCTCCCAGGACTTT < 41bp 0.511097329110443 0.852425184643317 0.5941855 0.44396737 prediction 0.682655711065748 Functional Gain - EIF4E1B ENSG00000175766 CDS Human protein_coding chr5:176070172 chr5:176070173 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_23825 0 0 0 0 2 unknown 0.438718592887535 0.438717040113031 0 0 hPsi_site_17549 iPseU_CNN:0;iRNA_PseU:0 17550 chr2 27726407 27726407 1 + C A LUAD 27726406 + 27726386 27726426 41 ACCCCATTGAAGACTGGAGTTCAACATTCCGACAAGTAGCA ACCCCATTGAAGACTGGAGTTAAACATTCCGACAAGTAGCA < 41bp 0.489417499611134 0.841321469277304 0.37401903 0.6785722 prediction 0.682642938554608 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27726406 chr2:27726407 stopgain 0.997 0 22 hPsi_associated_SNPs_23826 0 0 1 0 2 cytosol 0.43726505722267 0.438310731600855 0.3571444 0 hPsi_site_17550 iPseU_CNN:0.3571444;iRNA_PseU:0 17551 chr16 57731931 57731931 1 + G A BLCA 57731930 + 57731910 57731950 41 GAGGAGGCGGCCGAGTGGGCTGAATGGGCGAGGATGGAGAA GAGGAGGCGGCCGAGTGGGCTAAATGGGCGAGGATGGAGAA < 41bp 0.433754737764085 0.84131358656771 0.23660499 0.44451743 prediction 0.68262717313542 Functional Gain - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57731930 chr16:57731931 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_23827 0 0 0 0 0 cytosol 0.440566084435638 0.438718592783682 0 0 hPsi_site_17551 iPseU_CNN:0;iRNA_PseU:0 17552 chr2 241406530 241406530 1 + G A rs13013933 241406529 + 241406509 241406549 41 GCCTTGCTGGGGTCCAGGGCTGTTGGAGGACCCCGAGGGCT GCCTTGCTGGGGTCCAGGGCTATTGGAGGACCCCGAGGGCT < 41bp 0.491046349398174 0.841298843023585 0.42892668 0.6320091 prediction 0.682597686047171 Functional Gain - GPC1 ENSG00000063660 UTR3 Human protein_coding chr2:241406529 chr2:241406530 . . 0 22 hPsi_associated_SNPs_23828 0 0 1 0 0 Cytosol 0.438776584405216 0.439529167364565 0.2640182 0 hPsi_site_17552 iPseU_CNN:0.2640182;iRNA_PseU:0 17553 chr1 247751766 247751766 1 + G A SKCM 247751765 + 247751745 247751785 41 GGTTCTATTTGTGCTCATATTGATTCTGTATTTACTAACTA GGTTCTATTTGTGCTCATATTAATTCTGTATTTACTAACTA < 41bp 0.49042761734945 0.841296600869661 0.0831396 0.1474759 prediction 0.682593201739323 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247751765 chr1:247751766 synonymous SNV . 0 22 hPsi_associated_SNPs_23829 0 0 0 0 0 unknown 0.435021094598674 0.438751134923401 0 0 hPsi_site_17553 iPseU_CNN:0;iRNA_PseU:0 17554 chr19 6743776 6743776 1 + G A UCEC 6743775 + 6743755 6743795 41 GAAGAAAGCAAAAACGAATATGCGGCTCAACTGCAGCGCTT GAAGAAAGCAAAAACGAATATACGGCTCAACTGCAGCGCTT < 41bp 0.559247713576672 0.900542536733314 0.68599546 0.8617485 prediction 0.682589646313283 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6743775 chr19:6743776 nonsynonymous SNV 0.283 4 22 hPsi_associated_SNPs_23830 0 0 1 1 2 Ribosome 0.438716889281197 0.438718830856107 0.35150608 0 hPsi_site_17554 iPseU_CNN:0.35150608;iRNA_PseU:0 17555 chr13 77570096 77570096 1 + G A SKCM 77570095 + 77570075 77570115 41 AACTGGCAAGAACTACACAATGGAATGGTATGAACTTTTCC AACTGGCAAGAACTACACAATAGAATGGTATGAACTTTTCC < 41bp 0.444527959874056 0.841285094576105 0.19351038 0.2363972 prediction 0.682570189152211 Functional Gain - CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570095 chr13:77570096 nonsynonymous SNV 0.962 1 22 hPsi_associated_SNPs_23831 0 0 1 0 1 Endoplasmic reticulum 0.438718537709844 0.438718744872497 0 0 hPsi_site_17555 iPseU_CNN:0;iRNA_PseU:0 17556 chr9 37503070 37503070 1 + G A HNSC 37503069 + 37503049 37503089 41 GATAGCCAAAGCCATGAGGCTGAAGATCTCCAAAAGAAGGG GATAGCCAAAGCCATGAGGCTAAAGATCTCCAAAAGAAGGG < 41bp 0.547296316822578 0.888580785322713 0.25063956 0.42438078 prediction 0.682568937000272 Functional Gain - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37503069 chr9:37503070 synonymous SNV . 0 22 hPsi_associated_SNPs_23832 0 0 1 0 1 Ribosome 0.438694887226276 0.438718543981312 0 0 hPsi_site_17556 iPseU_CNN:0;iRNA_PseU:0 17557 chr20 57289712 57289712 1 + G A UCEC 57289711 + 57289691 57289731 41 TGGGTCCACCTGGACATTGCTGCACCGGTGCATGCTGTGAG TGGGTCCACCTGGACATTGCTACACCGGTGCATGCTGTGAG < 41bp 0.470438954047297 0.841283344139546 0.23448771 0.3215779 prediction 0.682566688279093 Functional Gain - NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289711 chr20:57289712 nonsynonymous SNV 0.099 1 22 hPsi_associated_SNPs_23833 0 0 1 0 2 cytosol 0.43895816588422 0.438639583885562 0 0 hPsi_site_17557 iPseU_CNN:0;iRNA_PseU:0 17558 chr4 524498 524498 1 + G A OV 524497 + 524477 524517 41 TGCAGCTGAGATTACTGTGATGCATTATTGGTTTGGTCAAG TGCAGCTGAGATTACTGTGATACATTATTGGTTTGGTCAAG < 41bp 0.445618993247378 0.841281120736559 0.18908027 0.22695383 prediction 0.682562241473117 Functional Gain - PIGG ENSG00000174227 CDS Human protein_coding chr4:524497 chr4:524498 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_23834 0 0 1 1 1 Nucleus 0.438755392323219 0.438717538072611 0 0 hPsi_site_17558 iPseU_CNN:0;iRNA_PseU:0 17559 chr9 116132318 116132318 1 + G A CESC 116132317 + 116132297 116132337 41 GTTCAGGAGCTGCTCTTCTATGAGCCAGCCTCCGGCACAGT GTTCAGGAGCTGCTCTTCTATAAGCCAGCCTCCGGCACAGT < 41bp 0.431517761223832 0.841280351728783 0.55157536 0.81017464 prediction 0.682560703457566 Functional Gain - BSPRY ENSG00000119411 CDS Human protein_coding chr9:116132317 chr9:116132318 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_23835 0 0 0 4 0 Ribosome 0.439437537635126 0.438718259972122 0.51719856 0 hPsi_site_17559 iPseU_CNN:0.51719856;iRNA_PseU:0 17560 chr6 39034045 39034045 1 + C A LUAD 39034044 + 39034024 39034064 41 TACGCACTCTCCTTCTCTGCTCTGGTTATCGCCTCTGCGAT TACGCACTCTCCTTCTCTGCTATGGTTATCGCCTCTGCGAT < 41bp 0.525044984700113 0.866323184686145 0.402999 0.5054419 prediction 0.682556399972064 Functional Gain - GLP1R ENSG00000112164 CDS Human protein_coding chr6:39034044 chr6:39034045 nonsynonymous SNV 0.121 3 22 hPsi_associated_SNPs_23836 0 0 0 0 2 unknown 0.438718593270146 0.4387185929951 0.0108838 0 hPsi_site_17560 iPseU_CNN:0.0108838;iRNA_PseU:0 17561 chr5 175110449 175110449 1 + G A UCEC 175110448 + 175110428 175110468 41 CCTGCTCCTCGGCCTCCTGGTGCTGCCCTTCTCTGCCATCT CCTGCTCCTCGGCCTCCTGGTACTGCCCTTCTCTGCCATCT < 41bp 0.552532722865415 0.893810774971188 0.68803644 0.94199544 prediction 0.682556104211546 Functional Gain - HRH2 ENSG00000113749 CDS Human protein_coding chr5:175110448 chr5:175110449 synonymous SNV . 0 22 hPsi_associated_SNPs_23837 0 0 0 0 0 nucleus 0.438713153367835 0.438718552709212 0.507918 0 hPsi_site_17561 iPseU_CNN:0.507918;iRNA_PseU:0 17562 chr11 60887029 60887029 1 + C A UCEC 60887028 + 60887008 60887048 41 CCCCAGAAAAGTGGCCGAGTTCTTGCCCTCCTTTGCTCAGG CCCCAGAAAAGTGGCCGAGTTATTGCCCTCCTTTGCTCAGG < 41bp 0.503743568064475 0.845020411158745 0.3765332 0.33811748 prediction 0.68255368618854 Functional Gain - CD5 ENSG00000110448 CDS Human protein_coding chr11:60887028 chr11:60887029 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_23838 0 0 0 0 1 exosome 0.438718592995102 0.438718592995099 0 0 hPsi_site_17562 iPseU_CNN:0;iRNA_PseU:0 17563 chr1 898914 898914 1 + G A rs114880602 898913 + 898893 898933 41 GGTTGGGGCCCCAGTGGCTTTGTACAGTCCATCTGCAAGAG GGTTGGGGCCCCAGTGGCTTTATACAGTCCATCTGCAAGAG < 41bp 0.532229152910566 0.873504250653062 0.26798847 0.35764343 prediction 0.682550195484992 Functional Gain - KLHL17 ENSG00000187961 intronic Human protein_coding chr1:898913 chr1:898914 . . 0 22 hPsi_associated_SNPs_23839 0 0 1 0 0 Cytosol 0.438718652998034 0.438718595414819 0 0 hPsi_site_17563 iPseU_CNN:0;iRNA_PseU:0 17564 chr10 135233045 135233045 1 + G A rs544502154 135233044 + 135233024 135233064 41 GTAGAGCGCGTGCTGAAGAGTGTGGCTGTGAAGCTGGGGAA GTAGAGCGCGTGCTGAAGAGTATGGCTGTGAAGCTGGGGAA < 41bp 0.55776479535334 0.899035458131949 0.17107353 0.29072922 prediction 0.682541325557217 Functional Gain - MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135233044 chr10:135233045 nonsynonymous SNV 0.552 0 22 hPsi_associated_SNPs_23840 0 0 1 0 2 Cytosol 0.438707601646056 0.43871853302687 0 0 hPsi_site_17564 iPseU_CNN:0;iRNA_PseU:0 17565 chr21 30411440 30411440 1 + G A UCEC 30411439 + 30411419 30411459 41 CAAGAGACCAAAAAGGGGGTTGTGACACCGAAAGAACTCTT CAAGAGACCAAAAAGGGGGTTATGACACCGAAAGAACTCTT < 41bp 0.451175826756313 0.841267714048697 0.5818094 0.67719835 prediction 0.682535428097395 Functional Gain - USP16 ENSG00000156256 CDS Human protein_coding chr21:30411439 chr21:30411440 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_23841 0 0 1 0 3 Ribosome 0.438717748198076 0.438725795282867 0.1907779 0 hPsi_site_17565 iPseU_CNN:0.1907779;iRNA_PseU:0 17566 chr2 113322060 113322060 1 + C A UCEC 113322059 + 113322039 113322079 41 TTGCTCCAGGCATCGCAGATTCTCTTCGTCATTTTAAGGTG TTGCTCCAGGCATCGCAGATTATCTTCGTCATTTTAAGGTG < 41bp 0.491407327618598 0.841266121138069 0.53026277 0.4117465 prediction 0.682532242276139 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113322059 chr2:113322060 nonsynonymous SNV 0.567 0 22 hPsi_associated_SNPs_23842 0 0 1 0 1 Nucleus 0.43760296349589 0.438884528263145 0 0 hPsi_site_17566 iPseU_CNN:0;iRNA_PseU:0 17567 chrX 150912037 150912037 1 + C A UCEC 150912036 + 150912016 150912056 41 TGAGGAGTACCTATTTGTCATCTTTGACTTCCTGATTGGCG TGAGGAGTACCTATTTGTCATATTTGACTTCCTGATTGGCG < 41bp 0.514092565819602 0.855356772242135 0.29120314 0.5737386 prediction 0.682528412845067 Functional Gain - CNGA2 ENSG00000183862 CDS Human protein_coding chrX:150912036 chrX:150912037 synonymous SNV . 0 22 hPsi_associated_SNPs_23843 0 0 0 0 0 unknown 0.438718473601747 0.438676815011713 0.1474772 0 hPsi_site_17567 iPseU_CNN:0.1474772;iRNA_PseU:0 17568 chr4 164272125 164272125 1 + G A UCEC 164272124 + 164272104 164272144 41 CTTACTGTAAGTCATACAAGTGTCTGCAGAAGTATAAGCTG CTTACTGTAAGTCATACAAGTATCTGCAGAAGTATAAGCTG < 41bp 0.458917884353607 0.841243546333877 0.25340897 0.3475809 prediction 0.682487092667754 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272124 chr4:164272125 nonsynonymous SNV 0.580 1 22 hPsi_associated_SNPs_23844 0 0 0 0 0 unknown 0.438944097974619 0.436985373809482 0 0 hPsi_site_17568 iPseU_CNN:0;iRNA_PseU:0 17569 chr11 2423983 2423983 1 + G A PAAD 2423982 + 2423962 2424002 41 CTCGGACTCTGACCTCAGCTTGCCCGGTGGTGCTGAAGTGG CTCGGACTCTGACCTCAGCTTACCCGGTGGTGCTGAAGTGG < 41bp 0.453779082383997 0.841239412409091 0.1968996 0.31611282 prediction 0.682478824818182 Functional Gain - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2423982 chr11:2423983 synonymous SNV . 0 22 hPsi_associated_SNPs_23845 0 0 1 0 0 Ribosome 0.438718593176776 0.438718599962141 0 0 hPsi_site_17569 iPseU_CNN:0;iRNA_PseU:0 17570 chr5 149576316 149576316 1 + C A UCEC 149576315 + 149576295 149576335 41 CTACTTCCTCATGCTGGCCATCTGTGGCATCCCCCTCTTCT CTACTTCCTCATGCTGGCCATATGTGGCATCCCCCTCTTCT < 41bp 0.49038882049869 0.841234773397912 0.5061326 0.6277318 prediction 0.682469546795823 Functional Gain - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149576315 chr5:149576316 synonymous SNV . 0 22 hPsi_associated_SNPs_23846 0 0 0 0 2 exosome 0.43870555105572 0.43871867407148 0.2431984 0 hPsi_site_17570 iPseU_CNN:0.2431984;iRNA_PseU:0 17571 chr9 140120094 140120094 1 + C A ESCA 140120093 + 140120073 140120113 41 CATGGACCCCCAAGAGATGGTCGTCAAGAACCCATATGCCC CATGGACCCCCAAGAGATGGTAGTCAAGAACCCATATGCCC < 41bp 0.501994825783171 0.843224240133271 0.19712809 0.789873 prediction 0.6824588287002 Functional Gain - CYSRT1 ENSG00000197191 CDS Human protein_coding chr9:140120093 chr9:140120094 synonymous SNV . 0 22 hPsi_associated_SNPs_23847 0 0 0 0 1 Ribosome 0.438718587237643 0.438718593027658 0.579746 0 hPsi_site_17571 iPseU_CNN:0.579746;iRNA_PseU:0 17572 chr16 10851782 10851782 1 + C A UCEC 10851781 + 10851761 10851801 41 CTGGGGAGAGGTCGACTACCTCATTGTGGACACCCCACCTG CTGGGGAGAGGTCGACTACCTAATTGTGGACACCCCACCTG < 41bp 0.528415666168083 0.869637199038847 0.1496169 0.5307754 prediction 0.682443065741528 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10851781 chr16:10851782 synonymous SNV . 0 22 hPsi_associated_SNPs_23848 0 0 1 0 1 Ribosome 0.438717499813732 0.438718458942958 0.0615508 0 hPsi_site_17572 iPseU_CNN:0.0615508;iRNA_PseU:0 17573 chr1 156622347 156622347 1 + C A rs201720135 156622346 + 156622326 156622366 41 AGCTTCCAGGCCTCCAAGGGTCCATGGACCACCTACTGAGA AGCTTCCAGGCCTCCAAGGGTACATGGACCACCTACTGAGA < 41bp 0.480229397320839 0.841218190754316 0.24092266 0.44767752 prediction 0.682436381508632 Functional Gain - BCAN ENSG00000132692 CDS Human protein_coding chr1:156622346 chr1:156622347 synonymous SNV . 0 22 hPsi_associated_SNPs_23849 0 0 0 0 0 chromatin 0.438819359151454 0.438675542021432 0 0 hPsi_site_17573 iPseU_CNN:0;iRNA_PseU:0 17574 chr16 57689395 57689395 1 + G A CESC 57689394 + 57689374 57689414 41 AAAGGCCGGAGCGGGGAGGCTGAGAAGAGACTCCTCCTGGT AAAGGCCGGAGCGGGGAGGCTAAGAAGAGACTCCTCCTGGT < 41bp 0.435619620502561 0.841213774683298 0.27693334 0.5617852 prediction 0.682427549366596 Functional Gain - ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57689394 chr16:57689395 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_23850 0 0 1 0 2 Nucleus 0.438718595822234 0.438718593383467 0.1235704 0 hPsi_site_17574 iPseU_CNN:0.1235704;iRNA_PseU:0 17575 chr1 41481862 41481862 1 + C T BLCA 41481863 - 41481843 41481883 41 GGGCAAGCTGGAAGAGAAGATGAAGGCGCTGATGATGGAGA GGGCAAGCTGGAAGAGAAGATAAAGGCGCTGATGATGGAGA < 41bp 0.540268303056845 0.881481040711745 0.2806439 0.3202687 prediction 0.6824254753098 Functional Gain - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41481863 chr1:41481862 nonsynonymous SNV 0.310 0 22 hPsi_associated_SNPs_23851 0 0 0 0 1 Endoplasmic reticulum 0.43860264759025 0.407956942517233 0 0 hPsi_site_17575 iPseU_CNN:0;iRNA_PseU:0 17576 chr1 4772744 4772744 1 + C A PAAD 4772743 + 4772723 4772763 41 GTCACCCAGCCCCCAAGGATTCTGGGGGAGGCCTCAGGTAC GTCACCCAGCCCCCAAGGATTATGGGGGAGGCCTCAGGTAC < 41bp 0.489167806854559 0.841200549543334 0.29108572 0.5593255 prediction 0.682401099086668 Functional Gain - AJAP1 ENSG00000196581 CDS Human protein_coding chr1:4772743 chr1:4772744 nonsynonymous SNV 0.965 1 22 hPsi_associated_SNPs_23852 0 0 0 0 1 exosome 0.438718598073182 0.438718257932812 0.118651 0 hPsi_site_17576 iPseU_CNN:0.118651;iRNA_PseU:0 17577 chr9 990777 990777 1 + G A STAD 990776 + 990756 990796 41 CCTGTGGAACACCATGACGCTGCAGCAGCAGTATCAGCTGA CCTGTGGAACACCATGACGCTACAGCAGCAGTATCAGCTGA < 41bp 0.550387259178495 0.891584777767885 0.2773978 0.45759138 prediction 0.682395037178781 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990776 chr9:990777 synonymous SNV . 0 22 hPsi_associated_SNPs_23853 0 0 0 0 0 unknown 0.438664232305513 0.437992720114772 0 0 hPsi_site_17577 iPseU_CNN:0;iRNA_PseU:0 17578 chr4 9783791 9783791 1 + G A LUAD 9783790 + 9783770 9783810 41 ACAGGTGGTCACCGCCTGCCTGCTGACCCTACTCATCATCT ACAGGTGGTCACCGCCTGCCTACTGACCCTACTCATCATCT < 41bp 0.458283895290878 0.841196177138607 0.4545737 0.68969405 prediction 0.682392354277214 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9783790 chr4:9783791 synonymous SNV . 0 22 hPsi_associated_SNPs_23854 0 0 0 0 0 unknown 0.43870104237919 0.438787765653436 0.3793881 0 hPsi_site_17578 iPseU_CNN:0.3793881;iRNA_PseU:0 17579 chr1 247751925 247751925 1 + G A COAD 247751924 + 247751904 247751944 41 TCCCCAGCTCCTGGTAAACCTGTGGGAACCCATGAAAACTA TCCCCAGCTCCTGGTAAACCTATGGGAACCCATGAAAACTA < 41bp 0.469146282026442 0.841193873726896 0.17770565 0.1873815 prediction 0.682387747453792 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247751924 chr1:247751925 synonymous SNV . 0 22 hPsi_associated_SNPs_23855 0 0 0 0 0 unknown 0.438718592995098 0.438718592993958 0 0 hPsi_site_17579 iPseU_CNN:0;iRNA_PseU:0 17580 chr2 39008747 39008747 1 + G A CESC 39008746 + 39008726 39008766 41 CAGACTGTTGAAACTATGAATGAAGGGGACCATAGAGTGAG CAGACTGTTGAAACTATGAATAAAGGGGACCATAGAGTGAG < 41bp 0.477798282808127 0.841181718967918 0.2574523 0.29794055 prediction 0.682363437935837 Functional Gain - GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008746 chr2:39008747 nonsynonymous SNV 0.867 2 22 hPsi_associated_SNPs_23856 0 0 1 1 1 Ribosome 0.43871851865519 0.438718594143928 0 0 hPsi_site_17580 iPseU_CNN:0;iRNA_PseU:0 17581 chr15 45707926 45707926 1 + G A LIHC 45707925 + 45707905 45707945 41 GTTCTCCTGAATGAATTAGATGGTGTTGGACTTAAGACAAT GTTCTCCTGAATGAATTAGATAGTGTTGGACTTAAGACAAT < 41bp 0.449707489786231 0.841173058063385 0.22227031 0.32711142 prediction 0.68234611612677 Functional Gain - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45707925 chr15:45707926 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23857 0 0 1 1 1 chromatin 0.438723895442908 0.440067787124911 0 0 hPsi_site_17581 iPseU_CNN:0;iRNA_PseU:0 17582 chrX 1761716 1761716 1 + G A SKCM 1761715 + 1761695 1761735 41 GGTGGTGGCATTCTGGTAATTGAAAGCCTCCTGGATGAAGA GGTGGTGGCATTCTGGTAATTAAAAGCCTCCTGGATGAAGA < 41bp 0.548522492642718 0.889692706932367 0.35407925 0.7671689 prediction 0.682340428579299 Functional Gain - ASMT ENSG00000196433 CDS Human protein_coding chrX:1761715 chrX:1761716 nonsynonymous SNV 0.148 3 22 hPsi_associated_SNPs_23858 0 0 0 0 1 exosome 0.438718417002019 0.438718821277583 0.5343378 0 hPsi_site_17582 iPseU_CNN:0.5343378;iRNA_PseU:0 17583 chr2 179444913 179444913 1 + G A LUAD 179444912 + 179444892 179444932 41 GGTAACATAAGCAGAGTCTTTGGATATTTCCTTAACAGTCA GGTAACATAAGCAGAGTCTTTAGATATTTCCTTAACAGTCA < 41bp 0.520359298139134 0.861523290052451 0.26451358 0.34894788 prediction 0.682327983826633 Functional Gain - TTN ENSG00000155657 CDS Human protein_coding chr2:179444912 chr2:179444913 synonymous SNV . 0 22 hPsi_associated_SNPs_23859 0 0 1 0 0 Nucleus 0.438714888595394 0.438718552223528 0 0 hPsi_site_17583 iPseU_CNN:0;iRNA_PseU:0 17584 chr19 41622254 41622254 1 + C A COAD 41622253 + 41622233 41622273 41 GCTCCCAAGACATGCTGACTTCTCTCACTAAGGTGCAAGGC GCTCCCAAGACATGCTGACTTATCTCACTAAGGTGCAAGGC < 41bp 0.498344573485055 0.84116149882275 0.34583354 0.44693288 prediction 0.682322997645499 Functional Gain - CYP2F1 ENSG00000197446 CDS Human protein_coding chr19:41622253 chr19:41622254 nonsynonymous SNV 0.948 3 22 hPsi_associated_SNPs_23860 0 0 0 1 1 exosome 0.439045957949806 0.438665342334497 0 0 hPsi_site_17584 iPseU_CNN:0;iRNA_PseU:0 17585 chr5 161569259 161569259 1 + G A LIHC 161569258 + 161569238 161569278 41 TATATCCCCTGCACACTCATTGTCGTCCTATCCTGGGTGTC TATATCCCCTGCACACTCATTATCGTCCTATCCTGGGTGTC < 41bp 0.556578333666576 0.897738843049558 0.20955378 0.5029015 prediction 0.682321018765965 Functional Gain - GABRG2 ENSG00000113327 CDS Human protein_coding chr5:161569258 chr5:161569259 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_23861 0 0 0 0 2 exosome 0.439042497096572 0.438760930226512 0.005803 0 hPsi_site_17585 iPseU_CNN:0.005803;iRNA_PseU:0 17586 chr5 176825050 176825050 1 + G A UCEC 176825049 + 176825029 176825069 41 CGTGGTGCTCATCAATGTCCTGCAGAGTCGGAGTCCCGGGC CGTGGTGCTCATCAATGTCCTACAGAGTCGGAGTCCCGGGC < 41bp 0.439616097861909 0.841156804768291 0.38100058 0.4817462 prediction 0.682313609536583 Functional Gain - SLC34A1 ENSG00000131183 CDS Human protein_coding chr5:176825049 chr5:176825050 synonymous SNV . 0 22 hPsi_associated_SNPs_23862 0 0 0 0 0 exosome 0.43872921842212 0.438727578277474 0 0 hPsi_site_17586 iPseU_CNN:0;iRNA_PseU:0 17587 chr11 71712520 71712520 1 + G A BRCA 71712519 + 71712499 71712539 41 GGAGCAGCTGACCCCTGCCCTGCACAGCACCAACTTCTCCT GGAGCAGCTGACCCCTGCCCTACACAGCACCAACTTCTCCT < 41bp 0.552748137998096 0.89390097777073 0.20962653 0.56768346 prediction 0.682305679545267 Functional Gain - IL18BP ENSG00000137496 CDS Human protein_coding chr11:71712519 chr11:71712520 synonymous SNV . 0 22 hPsi_associated_SNPs_23863 0 0 0 0 2 nucleus 0.438718576946291 0.438719153145178 0.13536692 0 hPsi_site_17587 iPseU_CNN:0.13536692;iRNA_PseU:0 17588 chr17 37819125 37819125 1 + G A UCEC 37819124 + 37819104 37819144 41 GTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGC GTTTGAATTTGCCTTTCACCTACGACAGCGCATCAGCGAGC < 41bp 0.539177329969292 0.880326269788107 0.28323105 0.44693318 prediction 0.682297879637629 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37819124 chr17:37819125 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_23864 0 0 1 1 1 Ribosome 0.438685548761203 0.437627716128741 0 0 hPsi_site_17588 iPseU_CNN:0;iRNA_PseU:0 17589 chr19 49100130 49100130 1 + G A UCEC 49100129 + 49100109 49100149 41 CATGTCCAACTACACGCTGCTGCCTCCCAGCCTGCTGGACC CATGTCCAACTACACGCTGCTACCTCCCAGCCTGCTGGACC < 41bp 0.557265672137463 0.898413447976864 0.29273826 0.73886895 prediction 0.682295551678804 Functional Gain - SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49100129 chr19:49100130 synonymous SNV . 0 22 hPsi_associated_SNPs_23865 0 0 1 0 1 exosome 0.438711122320996 0.438494399916766 0.4777379 0 hPsi_site_17589 iPseU_CNN:0.4777379;iRNA_PseU:0 17590 chr20 5966645 5966645 1 + G A STAD 5966644 + 5966624 5966664 41 TGGCTATGCTCGGCAGTATGTGTACCCAAGGCTATCCACAG TGGCTATGCTCGGCAGTATGTATACCCAAGGCTATCCACAG < 41bp 0.431383744181497 0.84114692883276 0.5127343 0.79503727 prediction 0.682293857665521 Functional Gain - MCM8 ENSG00000125885 CDS Human protein_coding chr20:5966644 chr20:5966645 synonymous SNV . 0 22 hPsi_associated_SNPs_23866 0 0 1 0 1 Ribosome 0.438717043602739 0.438718471877475 0.56460594 0 hPsi_site_17590 iPseU_CNN:0.56460594;iRNA_PseU:0 17591 chr7 76054489 76054489 1 + G A SKCM 76054488 + 76054468 76054508 41 GGGAAGCTCATCAGGGCTGCTGACCTCACCTTGGGCCCAGA GGGAAGCTCATCAGGGCTGCTAACCTCACCTTGGGCCCAGA < 41bp 0.453218583852326 0.841146380685492 0.14798033 0.30335915 prediction 0.682292761370984 Functional Gain - ZP3 ENSG00000188372 CDS Human protein_coding chr7:76054488 chr7:76054489 nonsynonymous SNV 0.191 3 22 hPsi_associated_SNPs_23867 0 0 0 0 0 Ribosome 0.438716579759109 0.43871856389298 0 0 hPsi_site_17591 iPseU_CNN:0;iRNA_PseU:0 17592 chr1 155717369 155717369 1 + G A HNSC 155717368 + 155717348 155717388 41 TGGCAGGGAAGCAGGTCGGCTGGAGGCTTTTGGCCAAGGGG TGGCAGGGAAGCAGGTCGGCTAGAGGCTTTTGGCCAAGGGG < 41bp 0.450828290824693 0.841141602595726 0.32921803 0.6351977 prediction 0.682283205191453 Functional Gain - MSTO2P ENSG00000125459 CDS Human protein_coding chr1:155717368 chr1:155717369 synonymous SNV . 0 22 hPsi_associated_SNPs_23868 0 0 1 0 2 unknown 0.43872021069799 0.43871859622907 0.2703954 0 hPsi_site_17592 iPseU_CNN:0.2703954;iRNA_PseU:0 17593 chr11 126147697 126147697 1 + G A rs667627 126147696 + 126147676 126147716 41 GGCCTTCTCCCCCTCCCCAGTGTCCTCTCCTCTCAGGCAGG GGCCTTCTCCCCCTCCCCAGTATCCTCTCCTCTCAGGCAGG < 41bp 0.469276069388589 0.841139344778097 0.26673213 0.4512316 prediction 0.682278689556195 Functional Gain - FOXRED1 ENSG00000110074 UTR3 Human protein_coding chr11:126147696 chr11:126147697 . . 0 22 hPsi_associated_SNPs_23869 1 0 1 0 0 Ribosome 0.438718460765809 0.438718569767236 0 0 hPsi_site_17593 iPseU_CNN:0;iRNA_PseU:0 17594 chr11 6806690 6806690 1 + G A rs140434296 6806689 + 6806669 6806709 41 CCCTCATGAGCTCAAGAGCCTGCTGGCTCATGGTGGCCACG CCCTCATGAGCTCAAGAGCCTACTGGCTCATGGTGGCCACG < 41bp 0.454094720092364 0.841135276894808 0.29622155 0.54695517 prediction 0.682270553789617 Functional Gain - OR2AG1 ENSG00000170803 CDS Human other chr11:6806689 chr11:6806690 nonsynonymous SNV 0.271 2 22 hPsi_associated_SNPs_23870 0 0 0 0 0 unknown 0.438693083693265 0.438619476569556 0.0939103400000001 0 hPsi_site_17594 iPseU_CNN:0.0939103400000001;iRNA_PseU:0 17595 chr3 136573966 136573966 1 + G A CESC 136573965 + 136573945 136573985 41 GATGAGAAAATGGCTTATGTTGACATGGCTACAGTTGTTTG GATGAGAAAATGGCTTATGTTAACATGGCTACAGTTGTTTG < 41bp 0.548019812688158 0.889147350436535 0.22282234 0.4817018 prediction 0.682255075496754 Functional Gain - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136573965 chr3:136573966 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_23871 0 0 1 0 0 nucleolus 0.409720502875723 0.43863453772225 0 0 hPsi_site_17595 iPseU_CNN:0;iRNA_PseU:0 17596 chr11 49974145 49974145 1 + G A LUAD 49974144 + 49974124 49974164 41 CCCATCACTGAGATCCCCCATGTACTTTTTCCTGGCCTATC CCCATCACTGAGATCCCCCATATACTTTTTCCTGGCCTATC < 41bp 0.46370533092379 0.841123934743489 0.21684551 0.30826724 prediction 0.682247869486979 Functional Gain - OR4C13 ENSG00000258817 CDS Human protein_coding chr11:49974144 chr11:49974145 nonsynonymous SNV 0.332 2 22 hPsi_associated_SNPs_23872 0 0 0 0 0 unknown 0.438718480552111 0.438718592628225 0 0 hPsi_site_17596 iPseU_CNN:0;iRNA_PseU:0 17597 chr4 69327610 69327610 1 + C A UCEC 69327609 + 69327589 69327629 41 TCGGCCTCGTCATCTTCATATCCCTGATTGTCCTGGCAGTG TCGGCCTCGTCATCTTCATATACCTGATTGTCCTGGCAGTG < 41bp 0.489765192495333 0.841120167139657 0.2785341 0.64071655 prediction 0.682240334279315 Functional Gain - TMPRSS11E ENSG00000087128 CDS Human protein_coding chr4:69327609 chr4:69327610 nonsynonymous SNV 0.357 1 22 hPsi_associated_SNPs_23873 0 0 0 0 2 exosome 0.438718584372757 0.438718212072559 0.2814331 0 hPsi_site_17597 iPseU_CNN:0.2814331;iRNA_PseU:0 17598 chr11 5443766 5443766 1 + G A LUSC 5443765 + 5443745 5443785 41 CCTTCATGGATTCTCCTTTATGGAGTCTTCTGTCCTCCTGG CCTTCATGGATTCTCCTTTATAGAGTCTTCTGTCCTCCTGG < 41bp 0.461390242518583 0.841111094915487 0.303336 0.38961408 prediction 0.682222189830973 Functional Gain - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5443765 chr11:5443766 nonsynonymous SNV 0.749 2 22 hPsi_associated_SNPs_23874 0 0 0 0 0 chromatin 0.438718592995282 0.438718592995097 0 0 hPsi_site_17598 iPseU_CNN:0;iRNA_PseU:0 17599 chr11 28134963 28134963 1 + G A STAD 28134962 + 28134942 28134982 41 TCTGGCATACCTAATTTAGGTGTCTGGCCAAACAGAATACA TCTGGCATACCTAATTTAGGTATCTGGCCAAACAGAATACA < 41bp 0.539084823437653 0.880183661185989 0.3114611 0.5777369 prediction 0.682197675496673 Functional Gain - METTL15 ENSG00000169519 CDS Human protein_coding chr11:28134962 chr11:28134963 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_23875 0 0 1 0 1 Nucleus 0.438718593007548 0.438718592996343 0.1554738 0 hPsi_site_17599 iPseU_CNN:0.1554738;iRNA_PseU:0 17600 chr19 36558795 36558795 1 + C A UCEC 36558794 + 36558774 36558814 41 CGAGCTGCACAACAACATCTTCTGTGGTGTGGCCTGCGGTC CGAGCTGCACAACAACATCTTATGTGGTGTGGCCTGCGGTC < 41bp 0.51839105100837 0.859487276056635 0.5336913 0.59673077 prediction 0.682192450096531 Functional Gain - WDR62 ENSG00000075702 CDS Human protein_coding chr19:36558794 chr19:36558795 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23876 0 0 1 0 1 Nucleus 0.438721281833615 0.439246300632364 0.12607894 0 hPsi_site_17600 iPseU_CNN:0.12607894;iRNA_PseU:0 17601 chr1 152692541 152692541 1 + C A ESCA 152692540 + 152692520 152692560 41 CCCCGGACCTTCGGGGTGAGTCCCCTGAGACGCTGGATTCA CCCCGGACCTTCGGGGTGAGTACCCTGAGACGCTGGATTCA < 41bp 0.508721426186876 0.84981441015112 0.13714445 0.43628162 prediction 0.682185967928488 Functional Gain - C1orf68 ENSG00000198854 CDS Human protein_coding chr1:152692540 chr1:152692541 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_23877 0 0 0 0 0 exosome 0.438718593037775 0.438718592995028 0 0 hPsi_site_17601 iPseU_CNN:0;iRNA_PseU:0 17602 chr17 48431923 48431923 1 + C A READ 48431922 + 48431902 48431942 41 CGTTTATCACGAGCAGCACTTCTTTTACATCCATGTGGACA CGTTTATCACGAGCAGCACTTATTTTACATCCATGTGGACA < 41bp 0.513504042423275 0.854594082914887 0.34344906 0.7684816 prediction 0.682180080983226 Functional Gain - XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48431922 chr17:48431923 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_23878 0 0 0 12 1 nucleolus 0.438365871506266 0.444412791876321 0.5369632 0 hPsi_site_17602 iPseU_CNN:0.5369632;iRNA_PseU:0 17603 chr21 37518706 37518706 1 + G A rs1056892 37518705 + 37518685 37518725 41 GGGAAAGACAGCATCAGGACTGTGGAGGAGGGGGCTGAGAC GGGAAAGACAGCATCAGGACTATGGAGGAGGGGGCTGAGAC < 41bp 0.467299812577649 0.841088034337562 0.2976285 0.5364767 prediction 0.682176068675124 Functional Gain - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37518705 chr21:37518706 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_23879 1 0 1 0 0 exosome 0.438668455327583 0.438593548948082 0.0729534000000001 0 hPsi_site_17603 iPseU_CNN:0.0729534000000001;iRNA_PseU:0 17604 chr1 43317094 43317094 1 + C A KIRP 43317093 + 43317073 43317113 41 CTTTCGGCGGCGCTCAGACCTCACCACGCACCAGCAAGATC CTTTCGGCGGCGCTCAGACCTAACCACGCACCAGCAAGATC < 41bp 0.486034063728774 0.841074754565885 0.29547444 0.5877291 prediction 0.68214950913177 Functional Gain - ZNF691 ENSG00000164011 CDS Human protein_coding chr1:43317093 chr1:43317094 synonymous SNV . 0 22 hPsi_associated_SNPs_23880 0 0 0 0 0 Cytosol 0.438729014878761 0.438720062615106 0.1754582 0 hPsi_site_17604 iPseU_CNN:0.1754582;iRNA_PseU:0 17605 chr4 79793852 79793852 1 + C A LUAD 79793851 + 79793831 79793871 41 CAACAGGCATCACCTGAATATCTTACCTCCCCTCAAGAGTT CAACAGGCATCACCTGAATATATTACCTCCCCTCAAGAGTT < 41bp 0.482397186951352 0.841067150368351 0.57699805 0.64120114 prediction 0.682134300736702 Functional Gain - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79793851 chr4:79793852 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_23881 0 0 1 0 1 Cytosol 0.438718592994693 0.438718593013427 0.12840618 0 hPsi_site_17605 iPseU_CNN:0.12840618;iRNA_PseU:0 17606 chr5 140604586 140604586 1 + G A SKCM 140604585 + 140604565 140604605 41 GCACCTGCCCCTCGCCTCCTTGGTCTCCATCAACGCGGACA GCACCTGCCCCTCGCCTCCTTAGTCTCCATCAACGCGGACA < 41bp 0.450103585402604 0.841065560181545 0.28217483 0.7171464 prediction 0.68213112036309 Functional Gain - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140604585 chr5:140604586 synonymous SNV . 0 22 hPsi_associated_SNPs_23882 0 0 1 0 0 exosome 0.438718720281749 0.438718730143044 0.4342928 0 hPsi_site_17606 iPseU_CNN:0.4342928;iRNA_PseU:0 17607 chr4 57176851 57176851 1 + C A UCEC 57176850 + 57176830 57176870 41 AGTCCAGTGATACGCCAAGTTCTCTAAGTCCTCTGAATCTC AGTCCAGTGATACGCCAAGTTATCTAAGTCCTCTGAATCTC < 41bp 0.488074986255168 0.841063359622203 0.26860145 0.42499256 prediction 0.682126719244406 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57176850 chr4:57176851 nonsynonymous SNV 0.856 1 22 hPsi_associated_SNPs_23883 0 0 0 2 2 cytosol 0.438739163598335 0.438719158470863 0 0 hPsi_site_17607 iPseU_CNN:0;iRNA_PseU:0 17608 chr21 43710219 43710219 1 + G A OV 43710218 + 43710198 43710238 41 CGGCCTCCTCATTGGCCTGCTGTACTTGGGGATCGGGAACG CGGCCTCCTCATTGGCCTGCTATACTTGGGGATCGGGAACG < 41bp 0.42930799949254 0.841061787247441 0.36026675 0.46390715 prediction 0.682123574494881 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43710218 chr21:43710219 synonymous SNV . 0 22 hPsi_associated_SNPs_23884 0 0 0 0 1 Cytosol 0.438718592195558 0.438718592911701 0 0 hPsi_site_17608 iPseU_CNN:0;iRNA_PseU:0 17609 chr17 33998815 33998815 1 + G A UCEC 33998814 + 33998794 33998834 41 TCATCGGTGCCTGCAACCTTTGCTCCTTCACCTACACCTGC TCATCGGTGCCTGCAACCTTTACTCCTTCACCTACACCTGC < 41bp 0.425236872842494 0.841060009479196 0.24609563 0.584115 prediction 0.682120018958392 Functional Gain - AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33998814 chr17:33998815 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23885 0 0 1 0 1 Cytosol 0.438713444804446 0.438321453199439 0.16823 0 hPsi_site_17609 iPseU_CNN:0.16823;iRNA_PseU:0 17610 chr10 6156054 6156054 1 + G A CESC 6156053 + 6156033 6156073 41 GTGGATGAAGACTTGGAAGTTGAAACCAAGGAAGAATGTGA GTGGATGAAGACTTGGAAGTTAAAACCAAGGAAGAATGTGA < 41bp 0.445831427334659 0.841055310660586 0.45245746 0.71883154 prediction 0.682110621321172 Functional Gain - RBM17 ENSG00000134453 CDS Human protein_coding chr10:6156053 chr10:6156054 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_23886 0 0 1 0 2 Ribosome 0.438718681798978 0.438718592995102 0.43766308 0 hPsi_site_17610 iPseU_CNN:0.43766308;iRNA_PseU:0 17611 chr11 45949839 45949839 1 + G A UCEC 45949838 + 45949818 45949858 41 CTATGAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGCT CTATGAACCCTACGTGGTGGTACCACGAGACTGTCCCCGCT < 41bp 0.55699732069554 0.898051853670098 0.16775584 0.8767146 prediction 0.682109065949116 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949838 chr11:45949839 synonymous SNV . 0 22 hPsi_associated_SNPs_23887 0 0 1 0 1 chromatin 0.438717159298232 0.438718910040398 0.7534292 0 hPsi_site_17611 iPseU_CNN:0.7534292;iRNA_PseU:0 17612 chr16 613462 613462 1 + G A BLCA 613461 + 613441 613481 41 GTCACACCTCTACAACCACATGAAGTACAGCCTCTGCAAGG GTCACACCTCTACAACCACATAAAGTACAGCCTCTGCAAGG < 41bp 0.446305804694981 0.841051535914667 0.24761483 0.35830528 prediction 0.682103071829334 Functional Gain - PRR35 ENSG00000161992 CDS Human protein_coding chr16:613461 chr16:613462 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23888 0 0 0 0 0 exosome 0.43916824267415 0.439105018154803 0 0 hPsi_site_17612 iPseU_CNN:0;iRNA_PseU:0 17613 chr9 140508597 140508597 1 + G A COAD 140508596 + 140508576 140508616 41 CTATGTGGTGGGGCAGGCACTGCAGCTGCATGCCGACGTTG CTATGTGGTGGGGCAGGCACTACAGCTGCATGCCGACGTTG < 41bp 0.542387207014088 0.883431640692197 0.4416583 0.7564833 prediction 0.682088867356218 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140508596 chr9:140508597 synonymous SNV . 0 22 hPsi_associated_SNPs_23889 0 0 1 0 1 Ribosome 0.438716827089755 0.438713780625825 0.5129666 0 hPsi_site_17613 iPseU_CNN:0.5129666;iRNA_PseU:0 17614 chr2 29386753 29386753 1 + G A SKCM 29386752 + 29386732 29386772 41 GGCAAGAATGATGGTTCAGTTGGAGGTGTGCAGTATTTTAG GGCAAGAATGATGGTTCAGTTAGAGGTGTGCAGTATTTTAG < 41bp 0.442884301401333 0.841038627854699 0.20519263 0.3228435 prediction 0.682077255709398 Functional Gain - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29386752 chr2:29386753 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_23890 0 0 1 3 2 nucleus 0.438711374325191 0.438718271192932 0 0 hPsi_site_17614 iPseU_CNN:0;iRNA_PseU:0 17615 chr9 71006476 71006476 1 + C A UCEC 71006475 + 71006455 71006495 41 GGACCTTATGTGAGAAAAGTTCTGTGTGATGAGCTGGGGGC GGACCTTATGTGAGAAAAGTTATGTGTGATGAGCTGGGGGC < 41bp 0.4972476978989 0.841037027988195 0.34496933 0.584155 prediction 0.68207405597639 Functional Gain - PGM5 ENSG00000154330 CDS Human protein_coding chr9:71006475 chr9:71006476 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_23891 0 0 0 0 1 exosome 0.438718593011148 0.438714796864628 0.16831 0 hPsi_site_17615 iPseU_CNN:0.16831;iRNA_PseU:0 17616 chr7 139611091 139611091 1 + G A LUAD 139611090 + 139611070 139611110 41 ATGATCAAGCAGGTGTTGGTTGAGAACTTCAGTAACTTTAC ATGATCAAGCAGGTGTTGGTTAAGAACTTCAGTAACTTTAC < 41bp 0.547402929378906 0.888439073385201 0.21076939 0.30305275 prediction 0.682072288012589 Functional Gain - TBXAS1 ENSG00000059377 CDS Human protein_coding chr7:139611090 chr7:139611091 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23892 0 0 0 0 2 Endoplasmic reticulum 0.442607554773051 0.52699784969244 0 0.05399569938488 hPsi_site_17616 iPseU_CNN:0;iRNA_PseU:0.05399569938488 17617 chr1 23191496 23191496 1 + G A OV 23191495 + 23191475 23191515 41 ACAACATCATCTGCAAGAGCTGTGGCTCGGGCCGGGGTGCC ACAACATCATCTGCAAGAGCTATGGCTCGGGCCGGGGTGCC < 41bp 0.430587846582922 0.841034681076452 0.34166434 0.6652001 prediction 0.682069362152904 Functional Gain - EPHB2 ENSG00000133216 CDS Human protein_coding chr1:23191495 chr1:23191496 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_23893 0 0 0 0 0 Endoplasmic reticulum 0.438718592990112 0.438718592990648 0.3304002 0 hPsi_site_17617 iPseU_CNN:0.3304002;iRNA_PseU:0 17618 chr15 89834855 89834855 1 + C A UCEC 89834854 + 89834834 89834874 41 CTATACACAGTTAAAACAGTTCTATGAGCCAAAACCTGATC CTATACACAGTTAAAACAGTTATATGAGCCAAAACCTGATC < 41bp 0.500731229061703 0.841764027116032 0.46695808 0.55290604 prediction 0.682065596108658 Functional Gain - FANCI ENSG00000140525 CDS Human protein_coding chr15:89834854 chr15:89834855 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_23894 0 0 1 0 2 Nucleus 0.439064547324337 0.438676177579239 0.10581208 0 hPsi_site_17618 iPseU_CNN:0.10581208;iRNA_PseU:0 17619 chr15 68582861 68582861 1 + G A UCEC 68582860 + 68582840 68582880 41 CACAAGGATCTTCTTCGATTTGCTCAAGTTTTCTCACAAAT CACAAGGATCTTCTTCGATTTACTCAAGTTTTCTCACAAAT < 41bp 0.458922954647903 0.841032747068921 0.31712842 0.8569797 prediction 0.682065494137841 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68582860 chr15:68582861 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_23895 0 0 1 0 0 Ribosome 0.438647349936025 0.435464705839204 0.7139594 0 hPsi_site_17619 iPseU_CNN:0.7139594;iRNA_PseU:0 17620 chr17 33288630 33288630 1 + G A BLCA 33288629 + 33288609 33288649 41 GACTCCGGCAGGGAAGCGAGTGATAAATCAGGAAGAATTGC GACTCCGGCAGGGAAGCGAGTAATAAATCAGGAAGAATTGC < 41bp 0.468841172434427 0.841015973495725 0.28769904 0.3958165 prediction 0.68203194699145 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33288629 chr17:33288630 synonymous SNV . 0 22 hPsi_associated_SNPs_23896 0 0 1 0 0 Cytosol 0.438718616529271 0.438718593153626 0 0 hPsi_site_17620 iPseU_CNN:0;iRNA_PseU:0 17621 chrX 135092702 135092702 1 + C A UCEC 135092701 + 135092681 135092721 41 TCCTTGGAATCTTCAGTGGATCTTTTGCAATGGGTGCTGCT TCCTTGGAATCTTCAGTGGATATTTTGCAATGGGTGCTGCT < 41bp 0.51041307403198 0.851424226195801 0.32594353 0.46431756 prediction 0.682022304327642 Functional Gain - SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135092701 chrX:135092702 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23897 0 0 0 0 0 Endoplasmic reticulum 0.438719995310163 0.438699232371635 0 0 hPsi_site_17621 iPseU_CNN:0;iRNA_PseU:0 17622 chr11 4929154 4929154 1 + G A SKCM 4929153 + 4929133 4929173 41 CTGTCTTCATCAGGATACCATGAAGCTGGCCTGCTCTGACA CTGTCTTCATCAGGATACCATAAAGCTGGCCTGCTCTGACA < 41bp 0.465893121277152 0.841010226764874 0.20392942 0.2223346 prediction 0.682020453529747 Functional Gain - OR51A7 ENSG00000176895 CDS Human protein_coding chr11:4929153 chr11:4929154 nonsynonymous SNV 0.965 1 22 hPsi_associated_SNPs_23898 0 0 0 0 0 exosome 0.43855531067541 0.438720620202948 0 0 hPsi_site_17622 iPseU_CNN:0;iRNA_PseU:0 17623 chr19 17922731 17922731 1 + G A COAD 17922730 + 17922710 17922750 41 CTGGGTATGTGTCTGGAGCTTGAGGGACTGAAGCCTGCCTC CTGGGTATGTGTCTGGAGCTTAAGGGACTGAAGCCTGCCTC < 41bp 0.549367893946221 0.890377519599464 0.29699904 0.66043997 prediction 0.682019251306486 Functional Gain - B3GNT3 ENSG00000179913 CDS Human protein_coding chr19:17922730 chr19:17922731 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_23899 0 0 0 0 0 Ribosome 0.43871895486072 0.438718878433833 0.32087994 0 hPsi_site_17623 iPseU_CNN:0.32087994;iRNA_PseU:0 17624 chr9 27197333 27197333 1 + C A UCEC 27197332 + 27197312 27197352 41 GGACTCCCTCCTCCAAGAGGTCTAAATCTCCTGCCTAAAAG GGACTCCCTCCTCCAAGAGGTATAAATCTCCTGCCTAAAAG < 41bp 0.489592913913439 0.841008988755106 0.3168492 0.6156718 prediction 0.682017977510212 Functional Gain - TEK ENSG00000120156 CDS Human protein_coding chr9:27197332 chr9:27197333 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_23900 0 0 0 0 1 nucleoplasm 0.438718592995119 0.438718592995102 0.2313436 0 hPsi_site_17624 iPseU_CNN:0.2313436;iRNA_PseU:0 17625 chr17 66036815 66036815 1 + G A BRCA 66036814 + 66036794 66036834 41 GGCACTGTAAATTGGTCTGTTGATGACATTGTCAAAGGCAT GGCACTGTAAATTGGTCTGTTAATGACATTGTCAAAGGCAT < 41bp 0.447612004366644 0.841008439510079 0.32999605 0.33364326 prediction 0.682016879020158 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66036814 chr17:66036815 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23901 0 0 1 0 2 Cytosol 0.443981128208417 0.438606847806125 0 0 hPsi_site_17625 iPseU_CNN:0;iRNA_PseU:0 17626 chr1 212798400 212798400 1 + G A SKCM 212798399 + 212798379 212798419 41 ACCAAAAGGGGAGAAGTGATTGATGTGCACAACCGTGTCCG ACCAAAAGGGGAGAAGTGATTAATGTGCACAACCGTGTCCG < 41bp 0.53838949731465 0.879394363332478 0.27118027 0.4806069 prediction 0.682009732035656 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798399 chr1:212798400 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_23902 0 0 0 0 0 exosome 0.438640230286225 0.472462803734315 0 0 hPsi_site_17626 iPseU_CNN:0;iRNA_PseU:0 17627 chr5 148748070 148748070 1 + C A READ 148748069 + 148748049 148748089 41 CCATGACCAGCTCTTCTACCTCAATGCCCTGGAGTGGGCGG CCATGACCAGCTCTTCTACCTAAATGCCCTGGAGTGGGCGG < 41bp 0.490261554466031 0.841002809954099 0.30050611 0.38302442 prediction 0.682005619908198 Functional Gain - PCYOX1L ENSG00000145882 CDS Human protein_coding chr5:148748069 chr5:148748070 synonymous SNV . 0 22 hPsi_associated_SNPs_23903 0 0 1 0 0 Ribosome 0.438718592994675 0.438718592969373 0 0 hPsi_site_17627 iPseU_CNN:0;iRNA_PseU:0 17628 chr17 61683700 61683700 1 + G A ESCA 61683699 + 61683679 61683719 41 AAGGACACTTATTTGCTGTATGAGGGTCGAGGCCCTGGTGG AAGGACACTTATTTGCTGTATAAGGGTCGAGGCCCTGGTGG < 41bp 0.441789770317064 0.840998600110663 0.28551602 0.64571553 prediction 0.681997200221326 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61683699 chr17:61683700 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23904 0 0 1 0 1 Ribosome 0.438719549565967 0.449526886111563 0.29143106 0 hPsi_site_17628 iPseU_CNN:0.29143106;iRNA_PseU:0 17629 chr20 42887032 42887032 1 + G A rs553730085 42887031 + 42887011 42887051 41 GGGCAGGTGGCCGGGGCAGGTGCCCCTCTGGCTTCCCTGCC GGGCAGGTGGCCGGGGCAGGTACCCCTCTGGCTTCCCTGCC < 41bp 0.443292349256337 0.840997585821749 0.26846886 0.80795914 prediction 0.681995171643497 Functional Gain - GDAP1L1 ENSG00000124194 UTR3 Human protein_coding chr20:42887031 chr20:42887032 . 0.003 0 22 hPsi_associated_SNPs_23905 0 0 0 0 1 nucleoplasm 0.438718529176419 0.438718545908577 0.61591828 0 hPsi_site_17629 iPseU_CNN:0.61591828;iRNA_PseU:0 17630 chr11 6413057 6413057 1 + G A rs143939609 6413056 + 6413036 6413076 41 CGAATACAGCAAGTGTGACCTGCCCCTGAGGACCCTGGAGA CGAATACAGCAAGTGTGACCTACCCCTGAGGACCCTGGAGA < 41bp 0.452193540939189 0.840994095793131 0.17586365 0.26301354 prediction 0.681988191586263 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6413056 chr11:6413057 synonymous SNV . 0 22 hPsi_associated_SNPs_23906 1 0 1 0 0 Endoplasmic reticulum 0.438696429374275 0.438715773141101 0 0 hPsi_site_17630 iPseU_CNN:0;iRNA_PseU:0 17631 chr7 128098071 128098071 1 + G A rs1048531 128098070 + 128098050 128098090 41 CCCCGGGGTCTGGTGTATGCTGTGCTTTCCTCAGCAGTATG CCCCGGGGTCTGGTGTATGCTATGCTTTCCTCAGCAGTATG < 41bp 0.490149490206659 0.840991648819988 0.33041972 0.3408215 prediction 0.681983297639976 Functional Gain - HILPDA ENSG00000240758;ENSG00000273184 ncRNA_intronic Human other chr7:128098070 chr7:128098071 . . 0 22 hPsi_associated_SNPs_23907 0 0 1 0 0 Ribosome 0.438718593587212 0.438718594257836 0 0 hPsi_site_17631 iPseU_CNN:0;iRNA_PseU:0 17632 chr10 88768898 88768898 1 + G A rs564783179 88768897 + 88768877 88768917 41 ACGACGTATGAGGAGCGGGATGCCTGGGTCCAAGCCATCCA ACGACGTATGAGGAGCGGGATACCTGGGTCCAAGCCATCCA < 41bp 0.529938133923908 0.87092184017225 0.35825932 0.74464816 prediction 0.681967412496684 Functional Gain - AGAP11 ENSG00000151303;ENSG00000261011;ENSG00000271880 ncRNA_exonic Human other chr10:88768897 chr10:88768898 . . 0 22 hPsi_associated_SNPs_23908 0 0 0 0 0 unknown 0.43871859390567 0.438718362580686 0.48929632 0 hPsi_site_17632 iPseU_CNN:0.48929632;iRNA_PseU:0 17633 chr19 33696521 33696521 1 + G A HNSC 33696520 + 33696500 33696540 41 GCGGGCCCTCAGACCTTCACTGCACGTGGCTGGTGGACACA GCGGGCCCTCAGACCTTCACTACACGTGGCTGGTGGACACA < 41bp 0.541846096154435 0.882823243784261 0.23960373 0.39028847 prediction 0.681954295259651 Functional Gain - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696520 chr19:33696521 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_23909 0 0 1 0 0 Ribosome 0.438723515410216 0.438737511335776 0 0 hPsi_site_17633 iPseU_CNN:0;iRNA_PseU:0 17634 chr1 151263413 151263413 1 + G A READ 151263412 + 151263392 151263432 41 GGCTTGTGCTTTGCCTCCCCTGGCTCCCTGAGCCGACACCG GGCTTGTGCTTTGCCTCCCCTAGCTCCCTGAGCCGACACCG < 41bp 0.446610995103298 0.84097390702927 0.20995581 0.30934113 prediction 0.68194781405854 Functional Gain - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151263412 chr1:151263413 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23910 0 0 1 1 0 chromatin 0.438718592995853 0.438722730561533 0 0 hPsi_site_17634 iPseU_CNN:0;iRNA_PseU:0 17635 chr18 30092327 30092327 1 + G A rs1985293 30092326 + 30092306 30092346 41 TCCTTAAGAAACCCTCAGCCTGTGGACCTCCAACTCAGGCA TCCTTAAGAAACCCTCAGCCTATGGACCTCCAACTCAGGCA < 41bp 0.470921295111994 0.840973090954531 0.19568801 0.20110655 prediction 0.681946181909061 Functional Gain - WBP11P1 ENSG00000260389 ncRNA_exonic Human transcribed_processed_pseudogene chr18:30092326 chr18:30092327 . . 0 22 hPsi_associated_SNPs_23911 0 0 0 0 0 unknown 0.438718592995859 0.438718592995126 0 0 hPsi_site_17635 iPseU_CNN:0;iRNA_PseU:0 17636 chrX 54837521 54837521 1 + G A UCEC 54837520 + 54837500 54837540 41 CTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGA CTCCAGTCATCCCAAGAGCCTAAAGCACCACCACCTCGGGA < 41bp 0.430886136189247 0.840970330650943 0.22866961 0.3290153 prediction 0.681940661301887 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837520 chrX:54837521 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_23912 0 0 1 0 1 chromatin 0.438720794843368 0.438718592968184 0 0 hPsi_site_17636 iPseU_CNN:0;iRNA_PseU:0 17637 chr3 128987412 128987412 1 + G A GBM 128987411 + 128987391 128987431 41 GAACCATCAGAAAAACCTTTTGACCTCAAGTCTGTGCCCCT GAACCATCAGAAAAACCTTTTAACCTCAAGTCTGTGCCCCT < 41bp 0.429050032369119 0.840964640751978 0.3646207 0.68513715 prediction 0.681929281503957 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128987411 chr3:128987412 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23913 0 0 1 0 2 Nucleus 0.438716865367055 0.438717787391345 0.3702743 0 hPsi_site_17637 iPseU_CNN:0.3702743;iRNA_PseU:0 17638 chr17 7286594 7286594 1 + G A BRCA 7286593 + 7286573 7286613 41 GCGCAGACTGTCCGAAGCTCTGAAAAGGCTACGTTCTGGGC GCGCAGACTGTCCGAAGCTCTAAAAAGGCTACGTTCTGGGC < 41bp 0.437428011780712 0.840955399783357 0.313335 0.72414875 prediction 0.681910799566714 Functional Gain - TNK1 ENSG00000174292 CDS Human protein_coding chr17:7286593 chr17:7286594 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23914 0 0 0 0 2 nucleus 0.438705419930902 0.438725301890398 0.4482975 0 hPsi_site_17638 iPseU_CNN:0.4482975;iRNA_PseU:0 17639 chr9 19450598 19450598 1 + G A rs7855739 19450597 + 19450577 19450617 41 TGTCCCCTATGTGTCCCTCCTGTGTGCCAACAAGAAATCAT TGTCCCCTATGTGTCCCTCCTATGTGCCAACAAGAAATCAT < 41bp 0.455317280260688 0.840950027044112 0.29399395 0.4158951 prediction 0.681900054088224 Functional Gain - ACER2 ENSG00000177076 CDS Human protein_coding chr9:19450597 chr9:19450598 synonymous SNV . 0 22 hPsi_associated_SNPs_23915 0 0 0 3 0 Endoplasmic reticulum 0.438718297095888 0.438717908163654 0 0 hPsi_site_17639 iPseU_CNN:0;iRNA_PseU:0 17640 chr6 88344648 88344648 1 + C A UCEC 88344647 + 88344627 88344667 41 GATGTCTTCATAAGTTCACCTCTTCTCTTCCCAAGTATCCA GATGTCTTCATAAGTTCACCTATTCTCTTCCCAAGTATCCA < 41bp 0.498010344021226 0.840948098757132 0.17732275 0.28203347 prediction 0.681896197514264 Functional Gain - ORC3 ENSG00000135336 CDS Human protein_coding chr6:88344647 chr6:88344648 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_23916 0 0 1 0 2 Cytosol 0.438718593320198 0.438718475826865 0 0 hPsi_site_17640 iPseU_CNN:0;iRNA_PseU:0 17641 chr6 127476516 127476516 1 + G A rs1892172 127476515 + 127476495 127476535 41 TCCTTCAGCAAAGGGTAACCTGTGTCCCCCAACAAATGAGA TCCTTCAGCAAAGGGTAACCTATGTCCCCCAACAAATGAGA < 41bp 0.44380463654455 0.840946102025198 0.16814828 0.20107183 prediction 0.681892204050395 Functional Gain - RSPO3 ENSG00000146374 CDS Human protein_coding chr6:127476515 chr6:127476516 synonymous SNV . 0 22 hPsi_associated_SNPs_23917 0 0 0 0 1 exosome 0.438726692205118 0.438776463919379 0 0 hPsi_site_17641 iPseU_CNN:0;iRNA_PseU:0 17642 chr6 125397908 125397908 1 + G A SKCM 125397907 + 125397887 125397927 41 TACCGCCAGCTCCGATTTTTTGGAGACCACACATCAAACCT TACCGCCAGCTCCGATTTTTTAGAGACCACACATCAAACCT < 41bp 0.437934649654885 0.840945639657816 0.24612767 0.36334246 prediction 0.681891279315632 Functional Gain - RNF217 ENSG00000146373 CDS Human protein_coding chr6:125397907 chr6:125397908 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_23918 0 0 1 0 1 Cytosol 0.438717382209466 0.438717276192652 0 0 hPsi_site_17642 iPseU_CNN:0;iRNA_PseU:0 17643 chr1 99771716 99771716 1 + C A LUAD 99771715 + 99771695 99771735 41 CCAGATCCATAGAAATGAGGTCAAGCTCAGAGCCATCGAGG CCAGATCCATAGAAATGAGGTAAAGCTCAGAGCCATCGAGG < 41bp 0.501537834836563 0.842481037962002 0.24726182 0.65402186 prediction 0.681886406250878 Functional Gain - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99771715 chr1:99771716 stopgain 0.995 1 22 hPsi_associated_SNPs_23919 0 0 0 0 0 exosome 0.438743828033543 0.438719255630001 0.30804372 0 hPsi_site_17643 iPseU_CNN:0.30804372;iRNA_PseU:0 17644 chr1 246831356 246831356 1 + G A rs8344 246831355 + 246831335 246831375 41 ACTTCCCAGGGAGGGTGAGGTGAGCTCGGGAACATAACGAT ACTTCCCAGGGAGGGTGAGGTAAGCTCGGGAACATAACGAT < 41bp 0.498630408210939 0.840941009015335 0.284413 0.71998197 prediction 0.68188201803067 Functional Gain - CNST ENSG00000162852 UTR3 Human protein_coding chr1:246831355 chr1:246831356 . . 0 22 hPsi_associated_SNPs_23920 0 0 1 0 0 Ribosome 0.438692910507529 0.438720216700732 0.43996394 0 hPsi_site_17644 iPseU_CNN:0.43996394;iRNA_PseU:0 17645 chr14 20586150 20586150 1 + G A CESC 20586149 + 20586129 20586169 41 GTTTCAGATACCATTTGCTGTGAACTTGCCCTTTTGTGGTC GTTTCAGATACCATTTGCTGTAAACTTGCCCTTTTGTGGTC < 41bp 0.529415563824107 0.870353993890858 0.3139897 0.4333707 prediction 0.681876860133504 Functional Gain - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586149 chr14:20586150 synonymous SNV . 0 22 hPsi_associated_SNPs_23921 0 0 0 0 0 unknown 0.438718563453708 0.438718592995571 0 0 hPsi_site_17645 iPseU_CNN:0;iRNA_PseU:0 17646 chr1 45221902 45221902 1 + G A COAD 45221901 + 45221881 45221921 41 GAAACAGCTTCGAATGAAGTTGTCTACAGGTTAGTCCCTTG GAAACAGCTTCGAATGAAGTTATCTACAGGTTAGTCCCTTG < 41bp 0.456759836411816 0.840936886284271 0.22578046 0.36855787 prediction 0.681873772568541 Functional Gain - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45221901 chr1:45221902 nonsynonymous SNV 0.956 2 22 hPsi_associated_SNPs_23922 0 0 1 0 1 Nucleus 0.437731341737675 0.438434500846085 0 0 hPsi_site_17646 iPseU_CNN:0;iRNA_PseU:0 17647 chr16 50745440 50745440 1 + C A SKCM 50745439 + 50745419 50745459 41 CAAGGTCTGGGACCCAGTCTTCTTCGGGGCCGCCTCCCCAC CAAGGTCTGGGACCCAGTCTTATTCGGGGCCGCCTCCCCAC < 41bp 0.513789695494083 0.854726306277704 0.6045046 0.8118744 prediction 0.681873221567241 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50745439 chr16:50745440 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_23923 0 0 0 0 0 exosome 0.438718869182114 0.438714805201177 0.4147396 0 hPsi_site_17647 iPseU_CNN:0.4147396;iRNA_PseU:0 17648 chr12 6424758 6424758 1 + G A OV 6424757 + 6424737 6424777 41 CTGCCACCAACAGGAGGCCCTGTGGGAGCTCCTGACCACCG CTGCCACCAACAGGAGGCCCTATGGGAGCTCCTGACCACCG < 41bp 0.426861486651072 0.840928678867613 0.2623402 0.31639615 prediction 0.681857357735226 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6424757 chr12:6424758 synonymous SNV . 0 22 hPsi_associated_SNPs_23924 0 0 0 0 2 Nucleus 0.438720255742264 0.438718591657606 0 0 hPsi_site_17648 iPseU_CNN:0;iRNA_PseU:0 17649 chr1 100736180 100736180 1 + C A COAD 100736179 + 100736159 100736199 41 GCTGCTTCTCCATCAGAACTTCATTTGAAAGGTGGAACTAA GCTGCTTCTCCATCAGAACTTAATTTGAAAGGTGGAACTAA < 41bp 0.493291943867064 0.840925286879088 0.25397462 0.26183537 prediction 0.681850573758175 Functional Gain - RTCA ENSG00000137996 CDS Human protein_coding chr1:100736179 chr1:100736180 nonsynonymous SNV 0.716 0 22 hPsi_associated_SNPs_23925 0 0 1 0 2 Ribosome 0.439231917646885 0.438826957037137 0 0 hPsi_site_17649 iPseU_CNN:0;iRNA_PseU:0 Maximal oxygen uptake response 17650 chr1 93306276 93306276 1 + G A rs142590488 93306275 + 93306255 93306295 41 GGGCAGACTGTTGGTGTAATTGTGCAAACTCGATCACTAGC GGGCAGACTGTTGGTGTAATTATGCAAACTCGATCACTAGC < 41bp 0.477748416145942 0.84092408922004 0.32539368 0.4419706 prediction 0.68184817844008 Functional Gain - SNORA66 ENSG00000207523 ncRNA_exonic Human snoRNA chr1:93306275 chr1:93306276 . . 0 22 hPsi_associated_SNPs_23926 0 0 1 0 0 unknown 0.438712574963386 0.438716975954987 0 0 hPsi_site_17650 iPseU_CNN:0;iRNA_PseU:0 17651 chr19 18285887 18285887 1 + C A PRAD 18285886 + 18285866 18285906 41 TGCGGGGGCCCCTGAAGAAGTCCAATGCACCGCTTGTCAAT TGCGGGGGCCCCTGAAGAAGTACAATGCACCGCTTGTCAAT < 41bp 0.48215363023173 0.840910949483403 0.34271577 0.7630355 prediction 0.681821898966806 Functional Gain - IFI30 ENSG00000216490 CDS Human protein_coding chr19:18285886 chr19:18285887 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_23927 0 0 1 0 1 Endoplasmic reticulum 0.438718653789031 0.438718616620989 0.526071 0 hPsi_site_17651 iPseU_CNN:0.526071;iRNA_PseU:0 17652 chr16 56624781 56624781 1 + G A COAD 56624780 + 56624760 56624800 41 TCCTGCTGCCCTGCGGAGTGTGAGAAGTGTGCCAAGGACTG TCCTGCTGCCCTGCGGAGTGTAAGAAGTGTGCCAAGGACTG < 41bp 0.448402357787679 0.840910614824886 0.260813 0.42649382 prediction 0.681821229649772 Functional Gain - MT3 ENSG00000087250 CDS Human protein_coding chr16:56624780 chr16:56624781 nonsynonymous SNV 0.949 0 22 hPsi_associated_SNPs_23928 0 0 0 3 1 exosome 0.43871921852655 0.438718944404026 0 0 hPsi_site_17652 iPseU_CNN:0;iRNA_PseU:0 17653 chr1 111778279 111778279 1 + C A OV 111778278 + 111778258 111778298 41 TAGGAGTTAGCAGAAGCCTTTCAGAAGGACTTCACAAAATC TAGGAGTTAGCAGAAGCCTTTAAGAAGGACTTCACAAAATC < 41bp 0.494203250672493 0.840908703386418 0.31691587 0.24893019 prediction 0.681817406772836 Functional Gain - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111778278 chr1:111778279 nonsynonymous SNV 0.731 0 22 hPsi_associated_SNPs_23929 0 0 0 0 1 exosome 0.438105040672595 0.438718587078964 0 0 hPsi_site_17653 iPseU_CNN:0;iRNA_PseU:0 17654 chr12 110390999 110390999 1 + G A LIHC 110390998 + 110390978 110391018 41 GTTGTCTTGACTCTCAACGCTGTGCTGGTTATTGATGGTTT GTTGTCTTGACTCTCAACGCTATGCTGGTTATTGATGGTTT < 41bp 0.463942153493991 0.840907275248083 0.39683932 0.48266813 prediction 0.681814550496166 Functional Gain - GIT2 ENSG00000139436 CDS Human protein_coding chr12:110390998 chr12:110390999 synonymous SNV . 0 22 hPsi_associated_SNPs_23930 0 0 0 0 1 Nucleus 0.438459778607956 0.439335913219044 0 0 hPsi_site_17654 iPseU_CNN:0;iRNA_PseU:0 17655 chr7 86817589 86817589 1 + G A UCEC 86817588 + 86817568 86817608 41 TTCTAGCCCCATGGCAGCATTGCAGATTCCAGTCCAGATCA TTCTAGCCCCATGGCAGCATTACAGATTCCAGTCCAGATCA < 41bp 0.44725710721101 0.840904428319117 0.37284118 0.59442544 prediction 0.681808856638235 Functional Gain - DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86817588 chr7:86817589 synonymous SNV . 0 22 hPsi_associated_SNPs_23931 0 0 1 2 1 Nucleus 0.43870793574165 0.438703342810733 0.18885088 0 hPsi_site_17655 iPseU_CNN:0.18885088;iRNA_PseU:0 17656 chr2 131103191 131103191 1 + G A LUSC 131103190 + 131103170 131103210 41 CGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTGCG CGAATGAACCGAGGTCGACATAAAGTGGGGGCACTGGTGCG < 41bp 0.431314146614712 0.840899509445135 0.27655828 0.3571458 prediction 0.68179901889027 Functional Gain - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103190 chr2:131103191 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_23932 0 0 1 0 2 Ribosome 0.438718589912489 0.438718587967765 0 0 hPsi_site_17656 iPseU_CNN:0;iRNA_PseU:0 17657 chr3 15475992 15475992 1 + C A LUSC 15475991 + 15475971 15476011 41 CTCCAGTTGGACCCAAAACTTCTCCCTTGAAAGATAACCCC CTCCAGTTGGACCCAAAACTTATCCCTTGAAAGATAACCCC < 41bp 0.507764924980705 0.848664268975388 0.26047748 0.26927632 prediction 0.681798687989368 Functional Gain - EAF1 ENSG00000144597 CDS Human protein_coding chr3:15475991 chr3:15475992 nonsynonymous SNV 0.851 4 22 hPsi_associated_SNPs_23933 0 0 1 0 1 Ribosome 0.438718592995089 0.438718592995117 0 0 hPsi_site_17657 iPseU_CNN:0;iRNA_PseU:0 17658 chrX 106171742 106171742 1 + G A LGG 106171741 + 106171721 106171761 41 GTGCAATCTCCTCCCTGGCCTGCATTATCTCTGTGGTGGGC GTGCAATCTCCTCCCTGGCCTACATTATCTCTGTGGTGGGC < 41bp 0.434019142879978 0.840898761053893 0.2998082 0.40738064 prediction 0.681797522107786 Functional Gain - CLDN2 ENSG00000165376 CDS Human protein_coding chrX:106171741 chrX:106171742 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_23934 0 0 0 0 0 Ribosome 0.438718514479626 0.43871840384217 0 0 hPsi_site_17658 iPseU_CNN:0;iRNA_PseU:0 17659 chr11 121000838 121000838 1 + C A UCEC 121000837 + 121000817 121000857 41 TGGGGGCAATGAGTCAGAGCTCTGTGACTCTGTGGCCCGGT TGGGGGCAATGAGTCAGAGCTATGTGACTCTGTGGCCCGGT < 41bp 0.514516637533117 0.855412387038328 0.290299 0.3655079 prediction 0.681791499010421 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:121000837 chr11:121000838 synonymous SNV . 0 22 hPsi_associated_SNPs_23935 0 0 0 0 1 exosome 0.438752817867163 0.437710041424153 0 0 hPsi_site_17659 iPseU_CNN:0;iRNA_PseU:0 17660 chrX 48417562 48417562 1 + C A UCEC 48417561 + 48417541 48417581 41 CATAGGTGGGCCGTACCTTGTCTAAGGTCCAACAAGTGCTG CATAGGTGGGCCGTACCTTGTATAAGGTCCAACAAGTGCTG < 41bp 0.487856800348431 0.840893190076081 0.7901392 0.9119531 prediction 0.681786380152161 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48417561 chrX:48417562 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_23936 0 0 1 0 1 nucleolus 0.438718614117178 0.438756974786089 0.2436278 0 hPsi_site_17660 iPseU_CNN:0.2436278;iRNA_PseU:0 17661 chr16 2820396 2820396 1 + C A LGG 2820395 + 2820375 2820415 41 ATAGACTCCCTCAGGGACTCTCGGTCCCTCAGCTACTCGCC ATAGACTCCCTCAGGGACTCTAGGTCCCTCAGCTACTCGCC < 41bp 0.508497499957201 0.849386787612058 0.22153568 0.34041697 prediction 0.681778575309714 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2820395 chr16:2820396 synonymous SNV . 0 22 hPsi_associated_SNPs_23937 0 0 1 0 2 Nucleus 0.4387202279031 0.438720276226787 0 0 hPsi_site_17661 iPseU_CNN:0;iRNA_PseU:0 17662 chr11 57310797 57310797 1 + G A UCEC 57310796 + 57310776 57310816 41 AAAGAGGAGGCCAAACATGGTGCAAAAGAGGAGGCTGATGC AAAGAGGAGGCCAAACATGGTACAAAAGAGGAGGCTGATGC < 41bp 0.544434008666393 0.885323096795292 0.2638933 0.57671916 prediction 0.681778176257798 Functional Gain - SMTNL1 ENSG00000214872 CDS Human protein_coding chr11:57310796 chr11:57310797 nonsynonymous SNV 0.046 0 22 hPsi_associated_SNPs_23938 0 0 0 0 1 exosome 0.438718592995107 0.438718592995209 0.15343832 0 hPsi_site_17662 iPseU_CNN:0.15343832;iRNA_PseU:0 17663 chr4 75937934 75937934 1 + G A SKCM 75937933 + 75937913 75937953 41 GGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCAC GGGTTCTCGTCAACAAGCGGTAGAGTCCACTTAACAACCAC < 41bp 0.435634565687407 0.840877824257128 0.7096858 0.84604216 prediction 0.681755648514256 Functional Gain - PARM1 ENSG00000169116 CDS Human protein_coding chr4:75937933 chr4:75937934 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_23939 0 0 0 0 0 exosome 0.43871859928005 0.438699678759806 0.27271272 0 hPsi_site_17663 iPseU_CNN:0.27271272;iRNA_PseU:0 17664 chr12 4665585 4665585 1 + C A COAD 4665584 + 4665564 4665604 41 AGTCCTTGCCAAAAAAGGTTTCTCTGTCTTCAGATACCACT AGTCCTTGCCAAAAAAGGTTTATCTGTCTTCAGATACCACT < 41bp 0.499415387624719 0.840875420142585 0.29143178 0.2856142 prediction 0.681750840285171 Functional Gain - RAD51AP1 ENSG00000111247 CDS Human protein_coding chr12:4665584 chr12:4665585 nonsynonymous SNV 0.046 1 22 hPsi_associated_SNPs_23940 0 0 1 0 2 Ribosome 0.438640712003378 0.438774268444527 0 0 hPsi_site_17664 iPseU_CNN:0;iRNA_PseU:0 17665 chr6 37140782 37140782 1 + G A STAD 37140781 + 37140761 37140801 41 TTGGCTCACAGGGACCCGAGTGTATAGCCCTCCAGAGTGGA TTGGCTCACAGGGACCCGAGTATATAGCCCTCCAGAGTGGA < 41bp 0.553756333841998 0.894630033663669 0.43203568 0.7013147 prediction 0.681747399643342 Functional Gain - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37140781 chr6:37140782 synonymous SNV . 0 22 hPsi_associated_SNPs_23941 0 0 1 0 1 Cytosol 0.438935889220895 0.439584415289573 0.4026294 0 hPsi_site_17665 iPseU_CNN:0.4026294;iRNA_PseU:0 17666 chrX 153648391 153648391 1 + G A BLCA 153648390 + 153648370 153648410 41 GGAATCGGGCGCCTGATTGCTGAGTGTCATCTCAACCCCAT GGAATCGGGCGCCTGATTGCTAAGTGTCATCTCAACCCCAT < 41bp 0.55449636240722 0.89536071559331 0.18095121 0.45135492 prediction 0.681728706372179 Functional Gain - TAZ ENSG00000102125 CDS Human protein_coding chrX:153648390 chrX:153648391 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_23942 0 0 1 2 2 Ribosome 0.438718604503644 0.438717584817343 0 0 hPsi_site_17666 iPseU_CNN:0;iRNA_PseU:0 17667 chr1 153660628 153660628 1 + G A UCEC 153660627 + 153660607 153660647 41 TGGGGCTGCTCATGCAGCGGTGCTGGGCTGAGGACCCACAG TGGGGCTGCTCATGCAGCGGTACTGGGCTGAGGACCCACAG < 41bp 0.55745246021717 0.898310080805819 0.27598247 0.6569547 prediction 0.681715241177298 Functional Gain - NPR1 ENSG00000169418 CDS Human protein_coding chr1:153660627 chr1:153660628 nonsynonymous SNV 0.760 5 22 hPsi_associated_SNPs_23943 0 0 0 0 2 Cytosol 0.438718580274029 0.438718630745264 0.3139094 0 hPsi_site_17667 iPseU_CNN:0.3139094;iRNA_PseU:0 17668 chr11 22777420 22777420 1 + G A UCEC 22777419 + 22777399 22777439 41 GAATTTCTGAAGATCCTCCTTGCAAATGCCCAAACAAGTTC GAATTTCTGAAGATCCTCCTTACAAATGCCCAAACAAGTTC < 41bp 0.547294574981613 0.888149400435643 0.28462207 0.58267784 prediction 0.68170965090806 Functional Gain - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22777419 chr11:22777420 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23944 0 0 1 0 1 Endoplasmic reticulum 0.438718593023581 0.438718592995337 0.16535568 0 hPsi_site_17668 iPseU_CNN:0.16535568;iRNA_PseU:0 17669 chr13 26343235 26343235 1 + G A BLCA 26343234 + 26343214 26343254 41 GGATGTGGTGAAGAAGCGGGTGAAGGCCATCACCCTCGCCA GGATGTGGTGAAGAAGCGGGTAAAGGCCATCACCCTCGCCA < 41bp 0.47418900425924 0.840847202174674 0.5062806 0.87862307 prediction 0.681694404349348 Functional Gain - ATP8A2 ENSG00000132932 CDS Human protein_coding chr13:26343234 chr13:26343235 synonymous SNV . 0 22 hPsi_associated_SNPs_23945 0 0 0 0 0 unknown 0.438718596267551 0.438718593239868 0.74468494 0 hPsi_site_17669 iPseU_CNN:0.74468494;iRNA_PseU:0 17670 chr19 10799914 10799914 1 + C A OV 10799913 + 10799893 10799933 41 GGCCAGAACTACAGTGGCCCTCCCAGCTCCTACCAGTCCTC GGCCAGAACTACAGTGGCCCTACCAGCTCCTACCAGTCCTC < 41bp 0.500869998111449 0.841713906738308 0.16343927 0.28122714 prediction 0.681687817253718 Functional Gain - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10799913 chr19:10799914 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_23946 0 0 1 0 1 Cytosol 0.438718593058649 0.438655325537905 0 0 hPsi_site_17670 iPseU_CNN:0;iRNA_PseU:0 17671 chr7 148497645 148497645 1 + G A ESCA 148497644 + 148497624 148497664 41 TATTTGGAGCGAGTGGATGGTGAAAAGGACACCTACAGTTA TATTTGGAGCGAGTGGATGGTAAAAAGGACACCTACAGTTA < 41bp 0.460139602299658 0.840831211938556 0.20104867 0.41411996 prediction 0.681662423877112 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148497644 chr7:148497645 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_23947 0 0 1 0 1 Nucleus 0.43865444672707 0.438718594411574 0 0 hPsi_site_17671 iPseU_CNN:0;iRNA_PseU:0 17672 chr1 28285004 28285004 1 + C A BLCA 28285003 + 28284983 28285023 41 CCAGGACATGGTGACCTACTTCATGAACCTGAGCCAGGCGA CCAGGACATGGTGACCTACTTAATGAACCTGAGCCAGGCGA < 41bp 0.49575726376732 0.840828226917804 0.3933993 0.50626874 prediction 0.681656453835608 Functional Gain - SMPDL3B ENSG00000130768 CDS Human protein_coding chr1:28285003 chr1:28285004 nonsynonymous SNV 0.075 3 22 hPsi_associated_SNPs_23948 0 0 0 0 1 chromatin 0.438718593665597 0.438718593040503 0.01253748 0 hPsi_site_17672 iPseU_CNN:0.01253748;iRNA_PseU:0 17673 chr11 120976646 120976646 1 + C A UCEC 120976645 + 120976625 120976665 41 GTTGGCCATCCCAGTTTTCTTCTTTGGCGTTCCTTACCGCA GTTGGCCATCCCAGTTTTCTTATTTGGCGTTCCTTACCGCA < 41bp 0.490572416293728 0.840822306707463 0.30487475 0.3974387 prediction 0.681644613414925 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:120976645 chr11:120976646 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23949 0 0 0 0 1 exosome 0.438723637022748 0.438721341913877 0 0 hPsi_site_17673 iPseU_CNN:0;iRNA_PseU:0 17674 chr3 98109899 98109899 1 + G A PRAD 98109898 + 98109878 98109918 41 TGTGGCCATATGCAACCCACTGCAGTACCACACCATGATGT TGTGGCCATATGCAACCCACTACAGTACCACACCATGATGT < 41bp 0.527933583310949 0.868750799652027 0.34803575 0.73865473 prediction 0.681634432682157 Functional Gain - OR5K3 ENSG00000206536 CDS Human protein_coding chr3:98109898 chr3:98109899 synonymous SNV . 0 22 hPsi_associated_SNPs_23950 0 0 0 0 0 unknown 0.438750407897632 0.438960262726267 0.47730946 0 hPsi_site_17674 iPseU_CNN:0.47730946;iRNA_PseU:0 17675 chr5 149581919 149581919 1 + G A SKCM 149581918 + 149581898 149581938 41 TTCCCGGCACAGGTGTGGATTGAAGCTGCTCTTCAGATCTT TTCCCGGCACAGGTGTGGATTAAAGCTGCTCTTCAGATCTT < 41bp 0.551685486165915 0.892498102431258 0.32666758 0.5277475 prediction 0.681625232530687 Functional Gain - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149581918 chr5:149581919 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_23951 0 0 0 0 2 exosome 0.450571329804287 0.438930082917355 0.0554950000000001 0 hPsi_site_17675 iPseU_CNN:0.0554950000000001;iRNA_PseU:0 17676 chr20 43943146 43943146 1 + C A LUSC 43943145 + 43943125 43943165 41 GCATTCCAGTTTCCAGGCAGTCCCCCAGGAGGGGGTGGCAC GCATTCCAGTTTCCAGGCAGTACCCCAGGAGGGGGTGGCAC < 41bp 0.476360073501291 0.840806633535462 0.17751002 0.54200715 prediction 0.681613267070924 Functional Gain - RBPJL ENSG00000124232 CDS Human protein_coding chr20:43943145 chr20:43943146 nonsynonymous SNV 0.069 0 22 hPsi_associated_SNPs_23952 0 0 0 0 2 unknown 0.438718592979883 0.438718593009918 0.0840143 0 hPsi_site_17676 iPseU_CNN:0.0840143;iRNA_PseU:0 17677 chr4 108940751 108940751 1 + G A LUSC 108940750 + 108940730 108940770 41 CAGATTACAAGCATAGCTAATGCCACCACCAGACAAGACCG CAGATTACAAGCATAGCTAATACCACCACCAGACAAGACCG < 41bp 0.441297946500929 0.840800864701381 0.23088509 0.7401408 prediction 0.681601729402761 Functional Gain - HADH ENSG00000138796 CDS Human protein_coding chr4:108940750 chr4:108940751 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_23953 0 0 1 0 2 Cytosol 0.438632096014232 0.439527978123841 0.4802816 0 hPsi_site_17677 iPseU_CNN:0.4802816;iRNA_PseU:0 17678 chr12 57908578 57908578 1 + G A COAD 57908577 + 57908557 57908597 41 CACCCCTGATGATCAGCGCCTGCTGGCCCATGTCACCCTGG CACCCCTGATGATCAGCGCCTACTGGCCCATGTCACCCTGG < 41bp 0.429769761393005 0.840795859024902 0.22000206 0.6441457 prediction 0.681591718049805 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57908577 chr12:57908578 synonymous SNV . 0 22 hPsi_associated_SNPs_23954 0 0 1 0 2 Cytosol 0.43871850839893 0.438719087756286 0.2882914 0 hPsi_site_17678 iPseU_CNN:0.2882914;iRNA_PseU:0 17679 chr9 35677808 35677808 1 + G A UCEC 35677807 + 35677787 35677827 41 GAGGGCCCGGAAGAAAACAGTGCCTATGAGCAGTTGCTGTC GAGGGCCCGGAAGAAAACAGTACCTATGAGCAGTTGCTGTC < 41bp 0.427821333938128 0.840795711462571 0.22836563 0.5905966 prediction 0.681591422925142 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35677807 chr9:35677808 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_23955 0 0 0 0 2 Endoplasmic reticulum 0.438701951581964 0.438772586386496 0.1811932 0 hPsi_site_17679 iPseU_CNN:0.1811932;iRNA_PseU:0 17680 chr3 98002019 98002019 1 + G A SKCM 98002018 + 98001998 98002038 41 TTTCTTGGCCAAAAACAGGATGATATCTCTGTCTGAATGCA TTTCTTGGCCAAAAACAGGATAATATCTCTGTCTGAATGCA < 41bp 0.519388448763887 0.860178797597863 0.3167373 0.3593638 prediction 0.681580697667951 Functional Gain - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98002018 chr3:98002019 nonsynonymous SNV 0.147 0 22 hPsi_associated_SNPs_23956 0 0 0 0 0 unknown 0.438718593498337 0.438718591034456 0 0 hPsi_site_17680 iPseU_CNN:0;iRNA_PseU:0 17681 chr6 109591374 109591374 1 + G A rs73520752 109591373 + 109591353 109591393 41 CAAGGGAGCTGTCCTGCTAATGTCAAGGTCAGCCTGCATGA CAAGGGAGCTGTCCTGCTAATATCAAGGTCAGCCTGCATGA < 41bp 0.450382108734457 0.840785953694751 0.3934863 0.6122929 prediction 0.681571907389501 Functional Gain - C6orf183 ENSG00000243587;ENSG00000233908 intergenic Human other chr6:109591373 chr6:109591374 . . 0 22 hPsi_associated_SNPs_23957 0 0 1 0 0 unknown 0.438344578153094 0.438539783957015 0.2245858 0 hPsi_site_17681 iPseU_CNN:0.2245858;iRNA_PseU:0 17682 chr20 30409500 30409500 1 + C A LUSC 30409499 + 30409479 30409519 41 ATCCGAGGTGGGGCAGGCCCTCTGTCTCACAGCCAGGGAGG ATCCGAGGTGGGGCAGGCCCTATGTCTCACAGCCAGGGAGG < 41bp 0.473403099890129 0.840773724982829 0.22708559 0.26923162 prediction 0.681547449965658 Functional Gain - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30409499 chr20:30409500 synonymous SNV . 0 22 hPsi_associated_SNPs_23958 0 0 0 0 1 exosome 0.438718409525168 0.438718692206438 0 0 hPsi_site_17682 iPseU_CNN:0;iRNA_PseU:0 17683 chr22 22043103 22043103 1 + G A rs563147601 22043102 + 22043082 22043122 41 GGGCCGCGGCATCCTCAGCATGGCCAACTCCGGGCCCAACA GGGCCGCGGCATCCTCAGCATAGCCAACTCCGGGCCCAACA < 41bp 0.556662507660477 0.897431260139386 0.24325934 0.4554634 prediction 0.681537504957819 Functional Gain - PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22043102 chr22:22043103 nonsynonymous SNV 0.940 4 22 hPsi_associated_SNPs_23959 0 0 1 0 2 Cytosol 0.438714462929716 0.438718716136326 0 0 hPsi_site_17683 iPseU_CNN:0;iRNA_PseU:0 17684 chr7 142962228 142962228 1 + G A CESC 142962227 + 142962207 142962247 41 TCCTCTGGGAGGACCTTGGATGACTTTCTGACCTTCCCCAG TCCTCTGGGAGGACCTTGGATAACTTTCTGACCTTCCCCAG < 41bp 0.427379142135846 0.840767072864576 0.334967 0.81241834 prediction 0.681534145729151 Functional Gain - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962227 chr7:142962228 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23960 0 0 1 0 1 Endoplasmic reticulum 0.438718696033401 0.438718592995106 0.62483668 0 hPsi_site_17684 iPseU_CNN:0.62483668;iRNA_PseU:0 17685 chrX 73745719 73745719 1 + C A UCEC 73745718 + 73745698 73745738 41 CATCCCTGGACTTAAGAAGATCTACTTGCAGGTGAGTGTGA CATCCCTGGACTTAAGAAGATATACTTGCAGGTGAGTGTGA < 41bp 0.486827631132654 0.840766257202894 0.27354842 0.31635725 prediction 0.681532514405788 Functional Gain - SLC16A2 ENSG00000147100 CDS Human protein_coding chrX:73745718 chrX:73745719 synonymous SNV . 0 22 hPsi_associated_SNPs_23961 0 0 0 0 1 Ribosome 0.438718842312335 0.438865451932356 0 0 hPsi_site_17685 iPseU_CNN:0;iRNA_PseU:0 17686 chr16 2802436 2802436 1 + G A rs75661649 2802435 + 2802415 2802455 41 GAAGGCCTACGAATACGCGGTGTCTTACGTCGCTTCCTCCG GAAGGCCTACGAATACGCGGTATCTTACGTCGCTTCCTCCG < 41bp 0.492283367316736 0.840765986554857 0.36661434 0.69500625 prediction 0.681531973109713 Functional Gain - SRRM2-AS1 ENSG00000205913 ncRNA_intronic Human antisense chr16:2802435 chr16:2802436 . . 0 22 hPsi_associated_SNPs_23962 0 0 1 0 0 unknown 0.438718587522732 0.438718592981565 0.3900125 0 hPsi_site_17686 iPseU_CNN:0.3900125;iRNA_PseU:0 17687 chr18 33751048 33751048 1 + G A rs143869017 33751047 + 33751027 33751067 41 GATTGGAGTGTGGAAAGATTTGCTTATATACCTGGAAAAAG GATTGGAGTGTGGAAAGATTTACTTATATACCTGGAAAAAG < 41bp 0.445485156260806 0.840762978586702 0.22960716 0.29040438 prediction 0.681525957173404 Functional Gain - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33751047 chr18:33751048 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_23963 0 0 1 0 2 Nucleus 0.438718365960654 0.438718590136324 0 0 hPsi_site_17687 iPseU_CNN:0;iRNA_PseU:0 17688 chr20 37153542 37153542 1 + G A PCPG 37153541 + 37153521 37153561 41 GACTTGAAAGGGATTGATGTTGTGGTTCCTTACTTTATTTC GACTTGAAAGGGATTGATGTTATGGTTCCTTACTTTATTTC < 41bp 0.549381596150779 0.890138373015525 0.36386746 0.50416845 prediction 0.681513553729493 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153541 chr20:37153542 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23964 0 0 1 2 0 Nucleus 0.438718594192215 0.43871859484223 0.00833689999999998 0 hPsi_site_17688 iPseU_CNN:0.00833689999999998;iRNA_PseU:0 17689 chr19 50912397 50912397 1 + C A UCEC 50912396 + 50912376 50912416 41 CAGCCTGACTGAGGATCAGTTCATCAGGACCCCCACCGGGG CAGCCTGACTGAGGATCAGTTAATCAGGACCCCCACCGGGG < 41bp 0.520899068632012 0.86165281910823 0.25445265 0.83337146 prediction 0.681507500952435 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912396 chr19:50912397 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_23965 0 0 1 0 2 Nucleus 0.438718592994964 0.438718592939342 0.66674292 0 hPsi_site_17689 iPseU_CNN:0.66674292;iRNA_PseU:0 17690 chr1 15541828 15541828 1 + G A LIHC 15541827 + 15541807 15541847 41 TGCTGCTGCTGCTTTCTATCTGCCTGAGTATCAGGGATAAG TGCTGCTGCTGCTTTCTATCTACCTGAGTATCAGGGATAAG < 41bp 0.43219822243538 0.840751752327857 0.1887508 0.5091492 prediction 0.681503504655715 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15541827 chr1:15541828 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_23966 0 0 0 0 1 cytosol 0.438752891241644 0.438719116891545 0.0182983999999999 0 hPsi_site_17690 iPseU_CNN:0.0182983999999999;iRNA_PseU:0 17691 chr21 34805103 34805103 1 + C A BLCA 34805102 + 34805082 34805122 41 GCTGGCAGGAGCCTGTTTCTTCCTGGTCCTGAAATATAGAG GCTGGCAGGAGCCTGTTTCTTACTGGTCCTGAAATATAGAG < 41bp 0.512426242404043 0.85317496721475 0.18851116 0.47349054 prediction 0.681497449621413 Functional Gain - IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34805102 chr21:34805103 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_23967 0 0 1 0 2 Endoplasmic reticulum 0.438857415317371 0.438349175615656 0 0 hPsi_site_17691 iPseU_CNN:0;iRNA_PseU:0 17692 chr17 36666587 36666587 1 + G A MESO 36666586 + 36666566 36666606 41 GCGTAGCGAGCTGAGCCACGTGGAGACGGACACTGAGGGCG GCGTAGCGAGCTGAGCCACGTAGAGACGGACACTGAGGGCG < 41bp 0.446790128514155 0.8407485697505 0.2724764 0.45890462 prediction 0.681497139501 Functional Gain - ARHGAP23 ENSG00000225485 CDS Human other chr17:36666586 chr17:36666587 synonymous SNV . 0 22 hPsi_associated_SNPs_23968 0 0 0 0 0 nucleus 0.438691666816714 0.438740587652326 0 0 hPsi_site_17692 iPseU_CNN:0;iRNA_PseU:0 17693 chr18 12028930 12028930 1 + G A SKCM 12028929 + 12028909 12028949 41 ACCAGTTTGGCCTGCACTGCTGGGATCTGGCGGCTGCCACA ACCAGTTTGGCCTGCACTGCTAGGATCTGGCGGCTGCCACA < 41bp 0.541324011606297 0.882071466614269 0.14932027 0.23112324 prediction 0.681494910015943 Functional Gain - IMPA2 ENSG00000141401 CDS Human protein_coding chr18:12028929 chr18:12028930 stopgain 1.000 1 22 hPsi_associated_SNPs_23969 0 0 0 0 1 Cytosol 0.438720656733094 0.439877337602245 0 0 hPsi_site_17693 iPseU_CNN:0;iRNA_PseU:0 17694 chr11 119045948 119045948 1 + C A GBM 119045947 + 119045927 119045967 41 ATCATGGCCAAGCTGCTGCCTCTGCGGGCTCTGCCTCTGCT ATCATGGCCAAGCTGCTGCCTATGCGGGCTCTGCCTCTGCT < 41bp 0.487085940413144 0.840745017384061 0.53581804 0.8393432 prediction 0.681490034768123 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119045947 chr11:119045948 nonsynonymous SNV 0.978 3 22 hPsi_associated_SNPs_23970 0 0 0 0 1 exosome 0.438705434379934 0.438703029302776 0.60705032 0 hPsi_site_17694 iPseU_CNN:0.60705032;iRNA_PseU:0 17695 chr16 30976976 30976976 1 + G A LIHC 30976975 + 30976955 30976995 41 ATCTCCGACGACGACCGGGGTGGCTCACCCCCTCCGGCCCC ATCTCCGACGACGACCGGGGTAGCTCACCCCCTCCGGCCCC < 41bp 0.553425126594533 0.894159988032363 0.3533066 0.7367431 prediction 0.681469722875661 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976975 chr16:30976976 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23971 0 0 1 0 1 Cytosol 0.438240455720078 0.43871735470105 0.4734862 0 hPsi_site_17695 iPseU_CNN:0.4734862;iRNA_PseU:0 17696 chr12 108604039 108604039 1 + C A UCEC 108604038 + 108604018 108604058 41 GTGCGGCGGCGCCAACCGCCTCTCTGTCTACCGGCTGCAGC GTGCGGCGGCGCCAACCGCCTATCTGTCTACCGGCTGCAGC < 41bp 0.5127387062635 0.853472286987752 0.35928315 0.6879984 prediction 0.681467161448505 Functional Gain - WSCD2 ENSG00000075035 CDS Human protein_coding chr12:108604038 chr12:108604039 synonymous SNV . 0 22 hPsi_associated_SNPs_23972 0 0 0 0 1 Endoplasmic reticulum 0.436492387790816 0.432403575388734 0.3759968 0 hPsi_site_17696 iPseU_CNN:0.3759968;iRNA_PseU:0 17697 chr11 65733911 65733911 1 + G A LUAD 65733910 + 65733890 65733930 41 TTGGAGCAGGGCGGCACGGCTGATGGCCTGCGGGAGCGGGA TTGGAGCAGGGCGGCACGGCTAATGGCCTGCGGGAGCGGGA < 41bp 0.552810843355093 0.893540778284353 0.24343216 0.4990779 prediction 0.68145986985852 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65733910 chr11:65733911 nonsynonymous SNV 0.279 1 22 hPsi_associated_SNPs_23973 0 0 1 0 1 Cytosol 0.438718584388859 0.438718592995301 0 0 hPsi_site_17697 iPseU_CNN:0;iRNA_PseU:0 17698 chr11 51515402 51515402 1 + G A UCEC 51515401 + 51515381 51515421 41 ATCATCACTGTGGTGGGATATGTGCTCATTGTGGTCACCAT ATCATCACTGTGGTGGGATATATGCTCATTGTGGTCACCAT < 41bp 0.526356535972786 0.867079284369835 0.34078312 0.39753875 prediction 0.681445496794098 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515401 chr11:51515402 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_23974 0 0 0 0 0 unknown 0.439760446440766 0.43847254779236 0 0 hPsi_site_17698 iPseU_CNN:0;iRNA_PseU:0 17699 chr7 156742725 156742725 1 + G A rs180970340 156742724 + 156742704 156742744 41 CCTGCGGAAAGCACGCCGGCTGCAGAGGACGGCGGGCCCCG CCTGCGGAAAGCACGCCGGCTACAGAGGACGGCGGGCCCCG < 41bp 0.444770046292584 0.840722270544523 0.38815984 0.66642785 prediction 0.681444541089047 Functional Gain - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156742724 chr7:156742725 synonymous SNV . 0 22 hPsi_associated_SNPs_23975 0 0 1 0 0 Nucleus 0.438718074955535 0.438717775927716 0.3328557 0 hPsi_site_17699 iPseU_CNN:0.3328557;iRNA_PseU:0 17700 chr19 2918110 2918110 1 + G A rs148920572 2918109 + 2918089 2918129 41 CTTACATAATCATGTGAGGATGCACACTGGAGAGAAACCTC CTTACATAATCATGTGAGGATACACACTGGAGAGAAACCTC < 41bp 0.463247475508596 0.840718796516831 0.23042998 0.60146207 prediction 0.681437593033661 Functional Gain - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2918109 chr19:2918110 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_23976 0 0 0 0 0 nucleoplasm 0.438807058320269 0.439379280121004 0.20292414 0 hPsi_site_17700 iPseU_CNN:0.20292414;iRNA_PseU:0 17701 chr11 123887042 123887042 1 + G A UCEC 123887041 + 123887021 123887061 41 TCCTTTGCTTCTTTGTTCCCTGTGTTGTCATTTATCTGAGG TCCTTTGCTTCTTTGTTCCCTATGTTGTCATTTATCTGAGG < 41bp 0.475749478275372 0.840714730226937 0.33675158 0.334741 prediction 0.681429460453874 Functional Gain - OR10G4 ENSG00000254737 CDS Human protein_coding chr11:123887041 chr11:123887042 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_23977 0 0 0 0 0 unknown 0.438716975935998 0.438718494283994 0 0 hPsi_site_17701 iPseU_CNN:0;iRNA_PseU:0 17702 chr12 13061209 13061209 1 + G A GBM 13061208 + 13061188 13061228 41 CTACAACAGTCCCTGATGGTTGCCGCAATGGCCTGAAATCC CTACAACAGTCCCTGATGGTTACCGCAATGGCCTGAAATCC < 41bp 0.445051845646885 0.84071467501641 0.22434294 0.3351565 prediction 0.68142935003282 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061208 chr12:13061209 nonsynonymous SNV 0.173 4 22 hPsi_associated_SNPs_23978 0 0 1 0 1 Nucleus 0.438718625254737 0.438718919451123 0 0 hPsi_site_17702 iPseU_CNN:0;iRNA_PseU:0 17703 chr14 100847776 100847776 1 + G A UCEC 100847775 + 100847755 100847795 41 AGAAGAAAAAATGTGAGGACTGTGTGGTACCCTATACTCCC AGAAGAAAAAATGTGAGGACTATGTGGTACCCTATACTCCC < 41bp 0.454391121265798 0.840712204079145 0.26830214 0.3106212 prediction 0.68142440815829 Functional Gain - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847775 chr14:100847776 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_23979 0 0 1 0 0 chromatin 0.438720417349792 0.438718648641632 0 0 hPsi_site_17703 iPseU_CNN:0;iRNA_PseU:0 17704 chr1 151070452 151070452 1 + C A READ 151070451 + 151070431 151070471 41 TTAACCTCGCAAGCCTTATTTCTTCAACCAACACCAAAACA TTAACCTCGCAAGCCTTATTTATTCAACCAACACCAAAACA < 41bp 0.510372394199786 0.851083907959958 0.46739215 0.6573108 prediction 0.681423027520345 Functional Gain - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151070451 chr1:151070452 nonsynonymous SNV 0.961 2 22 hPsi_associated_SNPs_23980 0 0 1 0 1 chromatin 0.438718587986793 0.43871837282912 0.3146216 0 hPsi_site_17704 iPseU_CNN:0.3146216;iRNA_PseU:0 17705 chr1 150477165 150477165 1 + G A COAD 150477164 + 150477144 150477184 41 CCGAGCAGTGCTCGGTTCTGTGGAAAGACTGTTGGGAGTGC CCGAGCAGTGCTCGGTTCTGTAGAAAGACTGTTGGGAGTGC < 41bp 0.429221874417242 0.84071085093569 0.296654 0.6229188 prediction 0.68142170187138 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150477164 chr1:150477165 synonymous SNV . 0 22 hPsi_associated_SNPs_23981 0 0 1 0 2 Ribosome 0.438718593037542 0.438754630976823 0.2458376 0 hPsi_site_17705 iPseU_CNN:0.2458376;iRNA_PseU:0 17706 chr1 2938503 2938503 1 + G A SKCM 2938502 + 2938482 2938522 41 GGCCTGATCACAGGGTGGGATGACGTGGAGAGACTCTGGAA GGCCTGATCACAGGGTGGGATAACGTGGAGAGACTCTGGAA < 41bp 0.461674175936524 0.840706510731811 0.261227 0.37001514 prediction 0.681413021463622 Functional Gain - ACTRT2 ENSG00000169717 CDS Human protein_coding chr1:2938502 chr1:2938503 nonsynonymous SNV 0.041 2 22 hPsi_associated_SNPs_23982 0 0 0 0 0 unknown 0.438659322128355 0.438718593214806 0 0 hPsi_site_17706 iPseU_CNN:0;iRNA_PseU:0 17707 chrX 49645231 49645231 1 + C A UCEC 49645230 + 49645210 49645250 41 GATACTGAGAGATTTCTTTCTCTCTGACAGGCACCGATGTG GATACTGAGAGATTTCTTTCTATCTGACAGGCACCGATGTG < 41bp 0.49393491182661 0.84070166698454 0.3927688 0.685795 prediction 0.68140333396908 Functional Gain - USP27X ENSG00000242013 CDS Human other chrX:49645230 chrX:49645231 synonymous SNV . 0 22 hPsi_associated_SNPs_23983 0 0 0 0 0 exosome 0.438636124688918 0.438719189025271 0.37159 0 hPsi_site_17707 iPseU_CNN:0.37159;iRNA_PseU:0 17708 chrX 47058998 47058998 1 + C A READ 47058997 + 47058977 47059017 41 TGGACCCCTCGTTGAGGACTTCCTTAGTGGTTTCCAGGTAT TGGACCCCTCGTTGAGGACTTACTTAGTGGTTTCCAGGTAT < 41bp 0.517794449466845 0.858493777966207 0.24902251 0.35098493 prediction 0.681398656998723 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47058997 chrX:47058998 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_23984 0 0 1 0 1 Nucleus 0.438718593013462 0.438596911064464 0 0 hPsi_site_17708 iPseU_CNN:0;iRNA_PseU:0 17709 chr19 50988258 50988258 1 + G A rs539358003 50988257 + 50988237 50988277 41 CATGTCAACAGTTTTGCAAGTGTTGCTCTTTTCCCCCACCT CATGTCAACAGTTTTGCAAGTATTGCTCTTTTCCCCCACCT < 41bp 0.519726104027338 0.860416930839682 0.6354495 0.7918742 prediction 0.681381653624688 Functional Gain - EMC10;JOSD2 ENSG00000161671;ENSG00000268518 intergenic Human other chr19:50988257 chr19:50988258 . . 0 22 hPsi_associated_SNPs_23985 0 0 0 0 0 unknown 0.438667741729574 0.438712379799073 0.3128494 0 hPsi_site_17709 iPseU_CNN:0.3128494;iRNA_PseU:0 17710 chr22 30127238 30127238 1 + C T LUAD 30127239 - 30127219 30127259 41 CCCACCTGGGGGGTGGCCTCTGCAGCCCAGAGTCCAGTGGG CCCACCTGGGGGGTGGCCTCTACAGCCCAGAGTCCAGTGGG < 41bp 0.540846875842239 0.881531089340533 0.31788617 0.41707307 prediction 0.681368426996588 Functional Gain - ZMAT5 ENSG00000100319 CDS Human protein_coding chr22:30127239 chr22:30127238 synonymous SNV . 0 22 hPsi_associated_SNPs_23986 0 0 0 0 0 Ribosome 0.438723897685433 0.438732358900073 0 0 hPsi_site_17710 iPseU_CNN:0;iRNA_PseU:0 17711 chr2 234680959 234680959 1 + G A LUAD 234680958 + 234680938 234680978 41 CCTTCACAAGGACCGCCCGGTGGAGCCGCTGGACCTGGCCG CCTTCACAAGGACCGCCCGGTAGAGCCGCTGGACCTGGCCG < 41bp 0.549082992983706 0.889766997749287 0.47932366 0.8577931 prediction 0.681368009531163 Functional Gain - UGT1A1;UGT1A10;UGT1A3;UGT1A4;UGT1A5;UGT1A6;UGT1A7;UGT1A8;UGT1A9 ENSG00000167165;ENSG00000240224;ENSG00000241119;ENSG00000241635;ENSG00000242366;ENSG00000242515;ENSG00000243135;ENSG00000244122;ENSG00000244474 CDS Human other chr2:234680958 chr2:234680959 synonymous SNV . 0 22 hPsi_associated_SNPs_23987 0 0 0 0 1 unknown 0.438718593141386 0.438718592995153 0.7155862 0 hPsi_site_17711 iPseU_CNN:0.7155862;iRNA_PseU:0 17712 chr14 35409488 35409488 1 + G A LUSC 35409487 + 35409467 35409507 41 TACAGAGTTCGGGAGTGGGATGACTGGAAGGGCATCCATCC TACAGAGTTCGGGAGTGGGATAACTGGAAGGGCATCCATCC < 41bp 0.501740910379184 0.842414400175886 0.34137318 0.7319319 prediction 0.681346979593405 Functional Gain - IGBP1P1 ENSG00000226677 ncRNA_exonic Human processed_pseudogene chr14:35409487 chr14:35409488 . . 0 22 hPsi_associated_SNPs_23988 0 0 0 0 0 unknown 0.438720915163821 0.438718702398371 0.4638638 0 hPsi_site_17712 iPseU_CNN:0.4638638;iRNA_PseU:0 17713 chr17 42636130 42636130 1 + G A LUSC 42636129 + 42636109 42636149 41 CTGGTTCCTGGCAGCCGGCATGAAGTGGGGCCACGAGGCCA CTGGTTCCTGGCAGCCGGCATAAAGTGGGGCCACGAGGCCA < 41bp 0.453800116854167 0.840667941542629 0.2276684 0.3895458 prediction 0.681335883085257 Functional Gain - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636129 chr17:42636130 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_23989 0 0 1 0 0 exosome 0.438718577520636 0.438725109370837 0 0 hPsi_site_17713 iPseU_CNN:0;iRNA_PseU:0 17714 chr11 118513074 118513074 1 + C A LIHC 118513073 + 118513053 118513093 41 GCAGCCTCCCCTCACTCTTCTCCCCCGCCTCTGCCCGCCAA GCAGCCTCCCCTCACTCTTCTACCCCGCCTCTGCCCGCCAA < 41bp 0.485555803119687 0.84066434760005 0.31647253 0.5799879 prediction 0.681328695200101 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118513073 chr11:118513074 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_23990 0 0 0 0 1 Cytosol 0.438718662980431 0.438718591959508 0.1599758 0 hPsi_site_17714 iPseU_CNN:0.1599758;iRNA_PseU:0 17715 chr22 29177000 29177000 1 + C A STAD 29176999 + 29176979 29177019 41 GCTGGTCCTAATGACTGGATTCTTTGTGCACATCAGGATGT GCTGGTCCTAATGACTGGATTATTTGTGCACATCAGGATGT < 41bp 0.504698273069115 0.845359030581745 0.23755187 0.2520079 prediction 0.681321515025261 Functional Gain - CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29176999 chr22:29177000 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_23991 0 0 1 0 1 Ribosome 0.438719381625261 0.441366023764585 0 0 hPsi_site_17715 iPseU_CNN:0;iRNA_PseU:0 17716 chr4 57335853 57335853 1 + G A rs112496764 57335852 + 57335832 57335872 41 CAAAGATGACGTAACTGCCCTGCATTGTAAAGTGGTATGCC CAAAGATGACGTAACTGCCCTACATTGTAAAGTGGTATGCC < 41bp 0.44657554056382 0.84065484029308 0.2717978 0.47869405 prediction 0.681309680586159 Functional Gain - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57335852 chr4:57335853 synonymous SNV . 0 22 hPsi_associated_SNPs_23992 0 0 1 0 2 Cytosol 0.438718753197232 0.438727315136254 0 0 hPsi_site_17716 iPseU_CNN:0;iRNA_PseU:0 17717 chr10 94836989 94836989 1 + G A UCEC 94836988 + 94836968 94837008 41 TCTAAATGGACCTCCTACAATGAAAACCAGTCCCACCGTGT TCTAAATGGACCTCCTACAATAAAAACCAGTCCCACCGTGT < 41bp 0.450038074825733 0.840651723660497 0.2375631 0.46567398 prediction 0.681303447320994 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94836988 chr10:94836989 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_23993 0 0 1 0 0 Endoplasmic reticulum 0.438716855106968 0.438680173373977 0 0 hPsi_site_17717 iPseU_CNN:0;iRNA_PseU:0 17718 chr9 125512249 125512249 1 + G A SKCM 125512248 + 125512228 125512268 41 CATGTACCTGCTCGCTGCGGTGGGGAATGTGCTCATCATCC CATGTACCTGCTCGCTGCGGTAGGGAATGTGCTCATCATCC < 41bp 0.457955163981287 0.84065010924514 0.33168745 0.6198729 prediction 0.68130021849028 Functional Gain - OR1L6 ENSG00000171459 CDS Human protein_coding chr9:125512248 chr9:125512249 synonymous SNV . 0 22 hPsi_associated_SNPs_23994 0 0 0 0 0 unknown 0.438718592996533 0.438718588879608 0.2397458 0 hPsi_site_17718 iPseU_CNN:0.2397458;iRNA_PseU:0 17719 chr17 40458324 40458324 1 + G A HNSC 40458323 + 40458303 40458343 41 GCTGTGTGAGGCGCTCAACATGAAATTCAAGGCCGAAGTGC GCTGTGTGAGGCGCTCAACATAAAATTCAAGGCCGAAGTGC < 41bp 0.426887609119542 0.840649314582753 0.22205916 0.34487173 prediction 0.681298629165506 Functional Gain - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40458323 chr17:40458324 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_23995 0 0 1 0 1 Ribosome 0.438362935726719 0.438105404881064 0 0 hPsi_site_17719 iPseU_CNN:0;iRNA_PseU:0 17720 chr10 85965678 85965678 1 + G A BRCA 85965677 + 85965657 85965697 41 AGAGAGGTGTATGAGCTGCATGTACAGGTACCCTCCCTCTA AGAGAGGTGTATGAGCTGCATATACAGGTACCCTCCCTCTA < 41bp 0.556212414358215 0.896859194948289 0.20076111 0.403662 prediction 0.681293561180149 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85965677 chr10:85965678 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_23996 0 0 0 0 2 cytosol 0.43871907279749 0.438543399832883 0 0 hPsi_site_17720 iPseU_CNN:0;iRNA_PseU:0 17721 chr11 124742329 124742329 1 + C A OV 124742328 + 124742308 124742348 41 CGACGGGGCGCTTCTCAGTGTCTCCAAGAGGCCAACTTAAC CGACGGGGCGCTTCTCAGTGTATCCAAGAGGCCAACTTAAC < 41bp 0.523451881825145 0.864089134177018 0.3833249 0.65843564 prediction 0.681274504703747 Functional Gain - ROBO3 ENSG00000154134 CDS Human protein_coding chr11:124742328 chr11:124742329 nonsynonymous SNV 0.613 4 22 hPsi_associated_SNPs_23997 0 0 0 0 1 exosome 0.438718595200834 0.438718659634003 0.31687128 0 hPsi_site_17721 iPseU_CNN:0.31687128;iRNA_PseU:0 17722 chr15 101605692 101605692 1 + G A BLCA 101605691 + 101605671 101605711 41 TCCAAGTTCAGCATCGCGGATGAAGACGCACGGCAGAACCC TCCAAGTTCAGCATCGCGGATAAAGACGCACGGCAGAACCC < 41bp 0.436707799536336 0.840633077731652 0.39772147 0.83278227 prediction 0.681266155463304 Functional Gain - LRRK1 ENSG00000154237 CDS Human protein_coding chr15:101605691 chr15:101605692 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_23998 0 0 0 0 0 Nucleus 0.438577064829981 0.439072342900044 0.66556454 0 hPsi_site_17722 iPseU_CNN:0.66556454;iRNA_PseU:0 17723 chr17 6544530 6544530 1 + G A COAD 6544529 + 6544509 6544549 41 ACGCCGGGGGGAAAAGCTGGTGCCCCGACTGCGTGCAGGGT ACGCCGGGGGGAAAAGCTGGTACCCCGACTGCGTGCAGGGT < 41bp 0.547042747996776 0.887674774524674 0.17985645 0.5316849 prediction 0.681264053055795 Functional Gain - TXNDC17 ENSG00000129235 CDS Human protein_coding chr17:6544529 chr17:6544530 nonsynonymous SNV 0.963 4 22 hPsi_associated_SNPs_23999 0 0 1 0 0 Ribosome 0.438723086269216 0.438720172373935 0.0633698 0 hPsi_site_17723 iPseU_CNN:0.0633698;iRNA_PseU:0 17724 chr11 7618836 7618836 1 + C A COAD 7618835 + 7618815 7618855 41 GAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCT GAAGCCCAGGGAGAAAAGATTAGAGACCTGGAAGTGTGTCT < 41bp 0.502256276709217 0.842881713239402 0.52143514 0.45200604 prediction 0.681250873060368 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7618835 chr11:7618836 synonymous SNV . 0 22 hPsi_associated_SNPs_24000 0 0 1 0 2 Cytosol 0.438718629937072 0.438717888089392 0 0 hPsi_site_17724 iPseU_CNN:0;iRNA_PseU:0 17725 chr3 161221316 161221316 1 + G A LUAD 161221315 + 161221295 161221335 41 CAAGGGTGAGTTGGCTAGAGTGCCCCGGTCGGCTTTCAGCG CAAGGGTGAGTTGGCTAGAGTACCCCGGTCGGCTTTCAGCG < 41bp 0.553980672054444 0.894597447845349 0.23590577 0.49314007 prediction 0.68123355158181 Functional Gain - OTOL1 ENSG00000182447 CDS Human protein_coding chr3:161221315 chr3:161221316 synonymous SNV . 0 22 hPsi_associated_SNPs_24001 0 0 0 0 0 exosome 0.438719068495801 0.438726601253401 0 0 hPsi_site_17725 iPseU_CNN:0;iRNA_PseU:0 17726 chr13 25671146 25671146 1 + G A SKCM 25671145 + 25671125 25671165 41 TGGTCGAGCTCAGAAAAAAGTGGAACGGCAGACGGAACTTA TGGTCGAGCTCAGAAAAAAGTAGAACGGCAGACGGAACTTA < 41bp 0.452529248134092 0.840616425505131 0.23921242 0.32005894 prediction 0.681232851010263 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25671145 chr13:25671146 synonymous SNV . 0 22 hPsi_associated_SNPs_24002 0 0 0 0 0 Cytosol 0.438718510831968 0.438719761515435 0 0 hPsi_site_17726 iPseU_CNN:0;iRNA_PseU:0 17727 chr7 128441539 128441539 1 + C A UCEC 128441538 + 128441518 128441558 41 GAACCATCCGGTAGTTTAGGTCTCTCAGATTACTCTGGGTT GAACCATCCGGTAGTTTAGGTATCTCAGATTACTCTGGGTT < 41bp 0.518120291688617 0.858736264924265 0.6307738 0.8034677 prediction 0.681231946471295 Functional Gain - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128441538 chr7:128441539 nonsynonymous SNV 0.775 0 22 hPsi_associated_SNPs_24003 0 0 0 0 1 chromatin 0.438569989540977 0.438733593634315 0.3453878 0 hPsi_site_17727 iPseU_CNN:0.3453878;iRNA_PseU:0 17728 chr16 697880 697880 1 + G A COAD 697879 + 697859 697899 41 GAGGACCCCCAATCCCCGGCTGCAGAGTGAGCCCCCCAACC GAGGACCCCCAATCCCCGGCTACAGAGTGAGCCCCCCAACC < 41bp 0.543494804208772 0.884107699359754 0.40463382 0.7768464 prediction 0.681225790301963 Functional Gain - MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697879 chr16:697880 synonymous SNV . 0 22 hPsi_associated_SNPs_24004 0 0 1 1 1 Cytosol 0.438718593262673 0.438718464198017 0.5536928 0 hPsi_site_17728 iPseU_CNN:0.5536928;iRNA_PseU:0 17729 chrX 152113972 152113972 1 + C A OV 152113971 + 152113951 152113991 41 GGCAGAGCAGCCCCAGCGGATCTGAGCAACTTGTCAGACGA GGCAGAGCAGCCCCAGCGGATATGAGCAACTTGTCAGACGA < 41bp 0.497468048712012 0.840609630386843 0.59866124 0.6973836 prediction 0.681219260773686 Functional Gain - ZNF185 ENSG00000147394 CDS Human protein_coding chrX:152113971 chrX:152113972 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_24005 0 0 0 0 1 chromatin 0.438718846732551 0.43871858905719 0.19744472 0 hPsi_site_17729 iPseU_CNN:0.19744472;iRNA_PseU:0 17730 chr10 75013743 75013743 1 + G A LUSC 75013742 + 75013722 75013762 41 CTGGAGGGGTATCAGAAAGATGGATTTCCAAAGCCAACTGT CTGGAGGGGTATCAGAAAGATAGATTTCCAAAGCCAACTGT < 41bp 0.467180706712723 0.840608182326542 0.2404502 0.36451685 prediction 0.681216364653085 Functional Gain - CFAP70 ENSG00000156042 CDS Human protein_coding chr10:75013742 chr10:75013743 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24006 0 0 0 0 1 cytosol 0.438718592995078 0.438718877030019 0 0 hPsi_site_17730 iPseU_CNN:0;iRNA_PseU:0 17731 chr7 148495070 148495070 1 + G A CESC 148495069 + 148495049 148495089 41 AAATGTTGATGAGGTGGAATTGAAGCCAGATACCTTAATAA AAATGTTGATGAGGTGGAATTAAAGCCAGATACCTTAATAA < 41bp 0.452316006222671 0.840603760967799 0.39795354 0.6002937 prediction 0.681207521935598 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148495069 chr7:148495070 synonymous SNV . 0 22 hPsi_associated_SNPs_24007 0 0 1 0 2 Nucleus 0.438718509129114 0.43871849756077 0.2005874 0 hPsi_site_17731 iPseU_CNN:0.2005874;iRNA_PseU:0 17732 chr6 111543280 111543280 1 + G A UCEC 111543279 + 111543259 111543299 41 GTCCCTCCCCTTATTGGAGGTGCTGTGCTTTGTTTTATCCC GTCCCTCCCCTTATTGGAGGTACTGTGCTTTGTTTTATCCC < 41bp 0.5471844931162 0.887788212199133 0.22138256 0.43200707 prediction 0.681207438165865 Functional Gain - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111543279 chr6:111543280 nonsynonymous SNV 0.930 0 22 hPsi_associated_SNPs_24008 0 0 0 0 0 cytosol 0.438719624271525 0.438706753723652 0 0 hPsi_site_17732 iPseU_CNN:0;iRNA_PseU:0 17733 chr1 206224674 206224674 1 + G A SKCM 206224673 + 206224653 206224693 41 GTTCGTGCTGCACTTAGCCCTGACAGACCTGGCCGTGGCGC GTTCGTGCTGCACTTAGCCCTAACAGACCTGGCCGTGGCGC < 41bp 0.445586813094013 0.840597959850349 0.3610257 0.5972744 prediction 0.681195919700698 Functional Gain - AVPR1B ENSG00000198049 CDS Human protein_coding chr1:206224673 chr1:206224674 synonymous SNV . 0 22 hPsi_associated_SNPs_24009 0 0 0 0 0 unknown 0.438720621144989 0.437167639380625 0.1945488 0 hPsi_site_17733 iPseU_CNN:0.1945488;iRNA_PseU:0 17734 chr11 210627 210627 1 + C A rs34418034 210626 + 210606 210646 41 TCTCCGGCACTGTGTGATGATCGCTACTGCTGGAGACCGCA TCTCCGGCACTGTGTGATGATAGCTACTGCTGGAGACCGCA < 41bp 0.478057930891627 0.840595062306204 0.14889061 0.29884005 prediction 0.681190124612409 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:210626 chr11:210627 synonymous SNV . 0 22 hPsi_associated_SNPs_24010 0 0 1 0 2 Ribosome 0.433554727398974 0.433994592065224 0 0 hPsi_site_17734 iPseU_CNN:0;iRNA_PseU:0 17735 chr7 21469678 21469678 1 + C A BRCA 21469677 + 21469657 21469697 41 AGTGGGACTTCCAATGGGAATCAATTAGTTTCCACACCCAC AGTGGGACTTCCAATGGGAATAAATTAGTTTCCACACCCAC < 41bp 0.489602717924386 0.840594888419802 0.2318039 0.35955626 prediction 0.681189776839604 Functional Gain - SP4 ENSG00000105866 CDS Human protein_coding chr7:21469677 chr7:21469678 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_24011 0 0 1 0 0 chromatin 0.4387185929952 0.438718592995106 0 0 hPsi_site_17735 iPseU_CNN:0;iRNA_PseU:0 17736 chr1 230910375 230910375 1 + C A KIRC 230910374 + 230910354 230910394 41 TGCTCTGGATGATGGGGAATTCTGGTACCGTGCTTGTTCCT TGCTCTGGATGATGGGGAATTATGGTACCGTGCTTGTTCCT < 41bp 0.507859687115767 0.84845384924591 0.26598626 0.39431742 prediction 0.681188324260286 Functional Gain - CAPN9 ENSG00000135773 CDS Human protein_coding chr1:230910374 chr1:230910375 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_24012 0 0 0 0 2 exosome 0.438725111242149 0.438718557221649 0 0 hPsi_site_17736 iPseU_CNN:0;iRNA_PseU:0 17737 chr10 26589800 26589800 1 + C A COAD 26589799 + 26589779 26589819 41 CTTGGGAGACAAGGTCAATTTCTTCCGCATGGTCATCTCAA CTTGGGAGACAAGGTCAATTTATTCCGCATGGTCATCTCAA < 41bp 0.50312145232253 0.843715502015628 0.46403468 0.778597 prediction 0.681188099386196 Functional Gain - GAD2 ENSG00000136750 CDS Human protein_coding chr10:26589799 chr10:26589800 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24013 0 0 0 0 1 exosome 0.438715371207032 0.438718595559421 0.557194 0 hPsi_site_17737 iPseU_CNN:0.557194;iRNA_PseU:0 17738 chr10 50872967 50872967 1 + G A PRAD 50872966 + 50872946 50872986 41 GAGACTTCTTCTAGCAAGTTTGCAAAAGCTGTGGAAGAAAG GAGACTTCTTCTAGCAAGTTTACAAAAGCTGTGGAAGAAAG < 41bp 0.455713746096767 0.840592292051158 0.33782285 0.42382073 prediction 0.681184584102316 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50872966 chr10:50872967 nonsynonymous SNV 0.977 2 22 hPsi_associated_SNPs_24014 0 0 0 0 0 unknown 0.438567508876536 0.43848055682597 0 0 hPsi_site_17738 iPseU_CNN:0;iRNA_PseU:0 17739 chr22 50278227 50278227 1 + G A PRAD 50278226 + 50278206 50278246 41 TGGACAACTCCAAAGCTGTCTGCATTCACTGCATGAACGAG TGGACAACTCCAAAGCTGTCTACATTCACTGCATGAACGAG < 41bp 0.446197205245099 0.840586883652285 0.34392256 0.5561526 prediction 0.68117376730457 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278226 chr22:50278227 nonsynonymous SNV 0.704 5 22 hPsi_associated_SNPs_24015 0 0 1 0 0 chromatin 0.441949244908237 0.443873373141408 0.1123052 0 hPsi_site_17739 iPseU_CNN:0.1123052;iRNA_PseU:0 17740 chr15 63893845 63893845 1 + G A UCEC 63893844 + 63893824 63893864 41 GTTTTGCCCGCACGCGCGTCTGCCCGCCCACCTTTCCTGGG GTTTTGCCCGCACGCGCGTCTACCCGCCCACCTTTCCTGGG < 41bp 0.461067466307182 0.840582639678099 0.2514451 0.3213125 prediction 0.681165279356198 Functional Gain - FBXL22 ENSG00000197361 CDS Human protein_coding chr15:63893844 chr15:63893845 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_24016 0 0 0 0 0 Nucleus 0.438711575014322 0.439003497932484 0 0 hPsi_site_17740 iPseU_CNN:0;iRNA_PseU:0 17741 chrX 106844122 106844122 1 + G A rs745463194 106844121 + 106844101 106844141 41 CCTCGACCCAAAGAGCAGTGTGACCCCTGCCATCATCTCGG CCTCGACCCAAAGAGCAGTGTAACCCCTGCCATCATCTCGG < 41bp 0.457269288355812 0.840568510745091 0.15241134 0.54871243 prediction 0.681137021490182 Functional Gain - FRMPD3 ENSG00000147234 CDS Human protein_coding chrX:106844121 chrX:106844122 synonymous SNV . 0 22 hPsi_associated_SNPs_24017 0 0 0 0 0 exosome 0.43870885023392 0.438718598341179 0.0974248600000001 0 hPsi_site_17741 iPseU_CNN:0.0974248600000001;iRNA_PseU:0 17742 chr3 39374010 39374010 1 + G A PCPG 39374009 + 39373989 39374029 41 TCATCCTGGTCCTTGTGGTCTGCAAGAAGCTGAGGAGCATC TCATCCTGGTCCTTGTGGTCTACAAGAAGCTGAGGAGCATC < 41bp 0.448184226163987 0.840562739129967 0.2922766 0.41407287 prediction 0.681125478259934 Functional Gain - CCR8 ENSG00000179934 CDS Human protein_coding chr3:39374009 chr3:39374010 nonsynonymous SNV 0.897 0 22 hPsi_associated_SNPs_24018 0 0 0 0 0 exosome 0.438718592839633 0.438723045699016 0 0 hPsi_site_17742 iPseU_CNN:0;iRNA_PseU:0 17743 chr1 41482755 41482755 1 + G A rs546664619 41482754 + 41482734 41482774 41 CCTACCCGCGGAGTATGGGATGTGGTGTGATTGTATTCCAA CCTACCCGCGGAGTATGGGATATGGTGTGATTGTATTCCAA < 41bp 0.515755128431541 0.856310112551029 0.25509465 0.28493 prediction 0.681109968238975 Functional Gain - SLFNL1-AS1 ENSG00000171790 intronic Human protein_coding chr1:41482754 chr1:41482755 . . 0 22 hPsi_associated_SNPs_24019 0 0 1 0 0 unknown 0.438718488993624 0.438718119466987 0 0 hPsi_site_17743 iPseU_CNN:0;iRNA_PseU:0 17744 chr11 66001273 66001273 1 + C A UCEC 66001272 + 66001252 66001292 41 CCAGCTGCAACTGCAACTCTTCCATGCCGAGGCCAGTGAAG CCAGCTGCAACTGCAACTCTTACATGCCGAGGCCAGTGAAG < 41bp 0.485397251990968 0.840553675567486 0.25968316 0.4269963 prediction 0.681107351134971 Functional Gain - PACS1 ENSG00000175115 CDS Human protein_coding chr11:66001272 chr11:66001273 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_24020 0 0 1 0 1 Cytosol 0.438718510622894 0.437782863344817 0 0 hPsi_site_17744 iPseU_CNN:0;iRNA_PseU:0 17745 chr13 25670591 25670591 1 + G A GBM 25670590 + 25670570 25670610 41 GGGCAAGCCAGTACGCATCATGTGGTCTCAGCGTGATCCAT GGGCAAGCCAGTACGCATCATATGGTCTCAGCGTGATCCAT < 41bp 0.535483313236828 0.87603645081511 0.23988861 0.2996691 prediction 0.681106275156563 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670590 chr13:25670591 nonsynonymous SNV 0.619 2 22 hPsi_associated_SNPs_24021 0 0 0 0 0 Cytosol 0.438510817471782 0.438692751178258 0 0 hPsi_site_17745 iPseU_CNN:0;iRNA_PseU:0 17746 chr20 5753645 5753645 1 + C A BLCA 5753644 + 5753624 5753664 41 CCAACAGCGAGGCTTTCAGTTCTTTGGAATTCCATTCTTTT CCAACAGCGAGGCTTTCAGTTATTTGGAATTCCATTCTTTT < 41bp 0.5121055244411 0.852651369477426 0.44956103 0.8022171 prediction 0.681091690072652 Functional Gain - C20orf196 ENSG00000171984 CDS Human protein_coding chr20:5753644 chr20:5753645 nonsynonymous SNV 0.872 4 22 hPsi_associated_SNPs_24022 0 0 0 0 1 Cytosol 0.438718585103102 0.438718592995104 0.6044342 0 hPsi_site_17746 iPseU_CNN:0.6044342;iRNA_PseU:0 17747 chr19 17877511 17877511 1 + C A COAD 17877510 + 17877490 17877530 41 GCTCTGGGAGGTCTTCCGCGTCTCCTCGGACAAGCTGGCGC GCTCTGGGAGGTCTTCCGCGTATCCTCGGACAAGCTGGCGC < 41bp 0.487077930518314 0.840541040126307 0.25459915 0.65735036 prediction 0.681082080252615 Functional Gain - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17877510 chr19:17877511 synonymous SNV . 0 22 hPsi_associated_SNPs_24023 0 0 1 0 1 Cytosol 0.438718584334823 0.43878579470537 0.31470072 0 hPsi_site_17747 iPseU_CNN:0.31470072;iRNA_PseU:0 17748 chr20 2638580 2638580 1 + G A COAD 2638579 + 2638559 2638599 41 CTGTCCTTCCCTTTAGGAGATGAGTGAAAAACCCAAAAAGA CTGTCCTTCCCTTTAGGAGATAAGTGAAAAACCCAAAAAGA < 41bp 0.542221382800483 0.882761673947403 0.27168864 0.6579652 prediction 0.681080582293839 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2638579 chr20:2638580 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24024 0 0 1 1 1 Cytosol 0.43871842122632 0.438718468490669 0.3159304 0 hPsi_site_17748 iPseU_CNN:0.3159304;iRNA_PseU:0 17749 chr12 121014436 121014436 1 + C A UCEC 121014435 + 121014415 121014455 41 AAAAAAACAGAAACAGAAGCTCCTGTTCAGCACCTCAGTCG AAAAAAACAGAAACAGAAGCTACTGTTCAGCACCTCAGTCG < 41bp 0.496354925419769 0.840537067288725 0.37404472 0.738512 prediction 0.681074134577449 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121014435 chr12:121014436 synonymous SNV . 0 22 hPsi_associated_SNPs_24025 0 0 1 2 1 Ribosome 0.438772721127955 0.439043025784605 0.477024 0 hPsi_site_17749 iPseU_CNN:0.477024;iRNA_PseU:0 17750 chr17 25746842 25746842 1 + G A SKCM 25746841 + 25746821 25746861 41 ACACGGGGCCTAAAGCCTGTTGGAATCTACAGCAGCACTGA ACACGGGGCCTAAAGCCTGTTAGAATCTACAGCAGCACTGA < 41bp 0.464676533595346 0.840536937354804 0.45514858 0.6925862 prediction 0.681073874709609 Functional Gain - TBC1D3P5 ENSG00000266433 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:25746841 chr17:25746842 . . 0 22 hPsi_associated_SNPs_24026 0 0 0 0 2 unknown 0.438718592155493 0.438718593046187 0.3851724 0 hPsi_site_17750 iPseU_CNN:0.3851724;iRNA_PseU:0 17751 chrX 26157355 26157355 1 + G A UCEC 26157354 + 26157334 26157374 41 TCATGCAGTTCAAATGAAGGTGCCAGCAGCCAAGATGAGAA TCATGCAGTTCAAATGAAGGTACCAGCAGCCAAGATGAGAA < 41bp 0.447924434781166 0.840536691115215 0.1785635 0.6029843 prediction 0.68107338223043 Functional Gain - MAGEB18 ENSG00000176774 CDS Human protein_coding chrX:26157354 chrX:26157355 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24027 0 0 0 0 0 unknown 0.438718631672125 0.438718801230871 0.2059686 0 hPsi_site_17751 iPseU_CNN:0.2059686;iRNA_PseU:0 17752 chr6 27218883 27218883 1 + C A UCEC 27218882 + 27218862 27218902 41 GGTGCGGGCCGTGCTGGATTTCTCCGAGTATAATGACGTAA GGTGCGGGCCGTGCTGGATTTATCCGAGTATAATGACGTAA < 41bp 0.487411302258907 0.840532015618551 0.265117 0.5873028 prediction 0.681064031237102 Functional Gain - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27218882 chr6:27218883 nonsynonymous SNV 0.844 4 22 hPsi_associated_SNPs_24028 0 0 0 0 2 Cytosol 0.438715005053217 0.438695280112173 0.1746056 0 hPsi_site_17752 iPseU_CNN:0.1746056;iRNA_PseU:0 17753 chr11 107501245 107501245 1 + C A COAD 107501244 + 107501224 107501264 41 AAGATGTGAACTACAACGGATCTGTTATAATACCAAGCCGG AAGATGTGAACTACAACGGATATGTTATAATACCAAGCCGG < 41bp 0.503952039640353 0.844474157236883 0.17020792 0.24559033 prediction 0.68104423519306 Functional Gain - ELMOD1 ENSG00000110675 CDS Human protein_coding chr11:107501244 chr11:107501245 synonymous SNV . 0 22 hPsi_associated_SNPs_24029 0 0 0 0 1 exosome 0.43871953128671 0.438719397412942 0 0 hPsi_site_17753 iPseU_CNN:0;iRNA_PseU:0 17754 chr12 30949055 30949055 1 + G A rs149918046 30949054 + 30949034 30949074 41 GCAGTTCCCACCGCTCCGGGTGTCCTCCCCAGTGCGCCGCG GCAGTTCCCACCGCTCCGGGTATCCTCCCCAGTGCGCCGCG < 41bp 0.515147164305966 0.855661258902328 0.2756386 0.45070437 prediction 0.681028189192726 Functional Gain - LINC00941 ENSG00000235884 ncRNA_exonic Human lincRNA chr12:30949054 chr12:30949055 . . 0 22 hPsi_associated_SNPs_24030 0 0 0 0 1 unknown 0.438689680232869 0.43871820227773 0 0 hPsi_site_17754 iPseU_CNN:0;iRNA_PseU:0 17755 chr6 134212923 134212923 1 + G A HNSC 134212922 + 134212902 134212942 41 GTGACCGCGAGCCGCTTATGTGGAACCACCGCGTCCTGACC GTGACCGCGAGCCGCTTATGTAGAACCACCGCGTCCTGACC < 41bp 0.555007999490795 0.895521295271278 0.43498945 0.76367295 prediction 0.681026591560966 Functional Gain - TCF21 ENSG00000118526 CDS Human protein_coding chr6:134212922 chr6:134212923 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_24031 0 0 0 0 2 exosome 0.438615501169597 0.438718614863129 0.5273459 0 hPsi_site_17755 iPseU_CNN:0.5273459;iRNA_PseU:0 17756 chr22 25024088 25024088 1 + G A rs202017930 25024087 + 25024067 25024107 41 CATGTGCCCGACGATCATGGTGGGCCAGGACGGCCAGGTCC CATGTGCCCGACGATCATGGTAGGCCAGGACGGCCAGGTCC < 41bp 0.43521467867646 0.840510866346682 0.23974356 0.5002989 prediction 0.681021732693363 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25024087 chr22:25024088 synonymous SNV . 0 22 hPsi_associated_SNPs_24032 0 0 0 0 1 exosome 0.438718688129548 0.438717207086208 0.000597799999999982 0 hPsi_site_17756 iPseU_CNN:0.000597799999999982;iRNA_PseU:0 17757 chr20 39798794 39798794 1 + C A rs560952244 39798793 + 39798773 39798813 41 ACAACCGGCTCTTCGTCTTCTCCATCAGCATGGCGTCGGTG ACAACCGGCTCTTCGTCTTCTACATCAGCATGGCGTCGGTG < 41bp 0.529495633385855 0.870003742280589 0.27390894 0.3290841 prediction 0.681016217789468 Functional Gain - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39798793 chr20:39798794 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24033 0 0 1 0 1 Cytosol 0.438718592995057 0.438718591814751 0 0 hPsi_site_17757 iPseU_CNN:0;iRNA_PseU:0 17758 chr1 46035569 46035569 1 + G A GBM 46035568 + 46035548 46035588 41 TGTCTCTCTTTCCAGGTGGATGGGAAGAGAGTCCCAAGGGA TGTCTCTCTTTCCAGGTGGATAGGAAGAGAGTCCCAAGGGA < 41bp 0.456551659186423 0.840503516377516 0.29369277 0.34524655 prediction 0.681007032755031 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46035568 chr1:46035569 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24034 0 0 1 0 1 Ribosome 0.438718594820431 0.438718586978395 0 0 hPsi_site_17758 iPseU_CNN:0;iRNA_PseU:0 17759 chr3 46750731 46750731 1 + G A GBM 46750730 + 46750710 46750750 41 CACAGACAAGCTGGAGACTGTGCCACCCCTCAATGAGCTCA CACAGACAAGCTGGAGACTGTACCACCCCTCAATGAGCTCA < 41bp 0.544830745317079 0.885331824185596 0.37856656 0.6889601 prediction 0.681002157737034 Functional Gain - TMIE ENSG00000181585 CDS Human protein_coding chr3:46750730 chr3:46750731 synonymous SNV . 0 22 hPsi_associated_SNPs_24035 0 0 0 0 1 exosome 0.438718551630165 0.438718665745052 0.3779202 0 hPsi_site_17759 iPseU_CNN:0.3779202;iRNA_PseU:0 17760 chr7 37960245 37960245 1 + G A BLCA 37960244 + 37960224 37960264 41 CTGTTGGCAGCAGTGAGCAGTGAAAACCGAAGCGGCAGAAG CTGTTGGCAGCAGTGAGCAGTAAAAACCGAAGCGGCAGAAG < 41bp 0.535429057582847 0.875923312256938 0.6204758 0.7273549 prediction 0.680988509348183 Functional Gain - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960244 chr7:37960245 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_24036 0 0 0 0 0 Ribosome 0.438476582882853 0.435643133984672 0.2137582 0 hPsi_site_17760 iPseU_CNN:0.2137582;iRNA_PseU:0 17761 chr9 96021231 96021231 1 + G A LUAD 96021230 + 96021210 96021250 41 CAGATGCCCCCGATTCCTGTTGTGCCCCCCATCACGCCCCT CAGATGCCCCCGATTCCTGTTATGCCCCCCATCACGCCCCT < 41bp 0.55402144842388 0.89450610176055 0.34864265 0.7398885 prediction 0.680969306673339 Functional Gain - WNK2 ENSG00000165238 CDS Human protein_coding chr9:96021230 chr9:96021231 nonsynonymous SNV 0.134 1 22 hPsi_associated_SNPs_24037 0 0 1 0 1 Nucleus 0.438718589182439 0.438718573679792 0.479777 0 hPsi_site_17761 iPseU_CNN:0.479777;iRNA_PseU:0 17762 chr17 72363841 72363841 1 + G A OV 72363840 + 72363820 72363860 41 CACAGGTCACAGGGGGAAGCTGGGACCTCCGAATAAGGCCA CACAGGTCACAGGGGGAAGCTAGGACCTCCGAATAAGGCCA < 41bp 0.546463978741244 0.886947096136899 0.19580555 0.24897692 prediction 0.68096623479131 Functional Gain - GPR142 ENSG00000257008 CDS Human protein_coding chr17:72363840 chr17:72363841 stopgain 0.005 0 22 hPsi_associated_SNPs_24038 0 0 0 0 1 exosome 0.4387185930409 0.438718599089434 0 0 hPsi_site_17762 iPseU_CNN:0;iRNA_PseU:0 17763 chr11 119044292 119044292 1 + G A BLCA 119044291 + 119044271 119044311 41 GCCCTAGACACGGTCCACGTTGACCCTGTGATCCGCGAGAG GCCCTAGACACGGTCCACGTTAACCCTGTGATCCGCGAGAG < 41bp 0.429422097908066 0.840473237222089 0.3178178 0.583147 prediction 0.680946474444177 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119044291 chr11:119044292 nonsynonymous SNV 0.738 4 22 hPsi_associated_SNPs_24039 0 0 0 0 0 exosome 0.438718849694075 0.438718581814981 0.166294 0 hPsi_site_17763 iPseU_CNN:0.166294;iRNA_PseU:0 17764 chr20 4168019 4168019 1 + G A BLCA 4168018 + 4167998 4168038 41 CGTGAGGCTGCCCGCCTCATTGAGATGTACCGAGACCTCTT CGTGAGGCTGCCCGCCTCATTAAGATGTACCGAGACCTCTT < 41bp 0.543454343386423 0.883922594585074 0.34814388 0.5134594 prediction 0.680936502397301 Functional Gain - SMOX ENSG00000088826 CDS Human protein_coding chr20:4168018 chr20:4168019 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_24040 0 0 0 0 0 Ribosome 0.438720946392899 0.43871859414227 0.0269188 0 hPsi_site_17764 iPseU_CNN:0.0269188;iRNA_PseU:0 17765 chr11 117163809 117163809 1 + C T LUAD 117163810 - 117163790 117163830 41 TGAGGTGATCATTGTGCGGGTGGAGATCAATGGACAGGATC TGAGGTGATCATTGTGCGGGTAGAGATCAATGGACAGGATC < 41bp 0.435612439843231 0.840465496360082 0.24980381 0.32814175 prediction 0.680930992720165 Functional Gain - BACE1 ENSG00000186318 CDS Human protein_coding chr11:117163810 chr11:117163809 synonymous SNV . 0 22 hPsi_associated_SNPs_24041 0 0 1 0 2 chromatin 0.438714069071924 0.438352695283234 0 0 hPsi_site_17765 iPseU_CNN:0;iRNA_PseU:0 17766 chr19 41594893 41594893 1 + G A UCEC 41594892 + 41594872 41594912 41 GGGGCCCCGGCGGGTCGTGGTGCTGTGCGGACATGATGCCG GGGGCCCCGGCGGGTCGTGGTACTGTGCGGACATGATGCCG < 41bp 0.559144818161882 0.899610272191151 0.32590336 0.81356 prediction 0.680930908058538 Functional Gain - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41594892 chr19:41594893 synonymous SNV . 0 22 hPsi_associated_SNPs_24042 0 0 0 0 1 unknown 0.438715880027993 0.438710856983632 0.62712 0 hPsi_site_17766 iPseU_CNN:0.62712;iRNA_PseU:0 17767 chr16 31373438 31373438 1 + G A COAD 31373437 + 31373417 31373457 41 GTGGGGAGCTTCACCTGGTCTGGAGGTGCCTTCCTGTACCC GTGGGGAGCTTCACCTGGTCTAGAGGTGCCTTCCTGTACCC < 41bp 0.427439396618669 0.84046462683221 0.32573503 0.654989 prediction 0.680929253664419 Functional Gain - ITGAX ENSG00000140678 CDS Human protein_coding chr16:31373437 chr16:31373438 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24043 0 0 0 0 2 Nucleus 0.438700681450098 0.438718546122195 0.309978 0 hPsi_site_17767 iPseU_CNN:0.309978;iRNA_PseU:0 17768 chr4 164272378 164272378 1 + C A UCEC 164272377 + 164272357 164272397 41 TACTTCCAGAAAACTTTGGCTCTGTAAGAAGTCAGCTCTCT TACTTCCAGAAAACTTTGGCTATGTAAGAAGTCAGCTCTCT < 41bp 0.503636761266651 0.844090290129021 0.30953613 0.30433315 prediction 0.68090705772474 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272377 chr4:164272378 nonsynonymous SNV 0.080 1 22 hPsi_associated_SNPs_24044 0 0 0 0 0 unknown 0.438720691783907 0.438642049707452 0 0 hPsi_site_17768 iPseU_CNN:0;iRNA_PseU:0 17769 chr9 100420976 100420976 1 + G A rs2297155 100420975 + 100420955 100420995 41 TCCTCCTACCTTCTCAGCTCTGTGTCCTGCAAACCCAACCT TCCTCCTACCTTCTCAGCTCTATGTCCTGCAAACCCAACCT < 41bp 0.553305149472111 0.893758026754129 0.24618906 0.30141944 prediction 0.680905754564035 Functional Gain - NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100420975 chr9:100420976 synonymous SNV . 0 22 hPsi_associated_SNPs_24045 0 0 1 0 2 Nucleus 0.438718586945415 0.43871860824557 0 0 hPsi_site_17769 iPseU_CNN:0;iRNA_PseU:0 17770 chr20 61439573 61439573 1 + G A UCEC 61439572 + 61439552 61439592 41 GCTTGTGTCTGATGGATCCCTGCTGTCCCCTTTCTCTGGCT GCTTGTGTCTGATGGATCCCTACTGTCCCCTTTCTCTGGCT < 41bp 0.533002887395115 0.873455711154873 0.24453971 0.4697142 prediction 0.680905647519516 Functional Gain - OGFR ENSG00000060491 CDS Human protein_coding chr20:61439572 chr20:61439573 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24046 0 0 1 0 0 Ribosome 0.438719004930331 0.438715912420333 0 0 hPsi_site_17770 iPseU_CNN:0;iRNA_PseU:0 17771 chr2 103095459 103095459 1 + C A LGG 103095458 + 103095438 103095478 41 TATCTCCTGCCACCCATCGTTCTGGAGGGCGGCTACTTCAT TATCTCCTGCCACCCATCGTTATGGAGGGCGGCTACTTCAT < 41bp 0.519634465574989 0.860082852864567 0.2176745 0.40568942 prediction 0.680896774579155 Functional Gain - SLC9A4 ENSG00000180251 CDS Human protein_coding chr2:103095458 chr2:103095459 nonsynonymous SNV 0.578 3 22 hPsi_associated_SNPs_24047 0 0 0 0 0 exosome 0.438717248213287 0.438723688667598 0 0 hPsi_site_17771 iPseU_CNN:0;iRNA_PseU:0 17772 chr19 58904809 58904809 1 + G A LUAD 58904808 + 58904788 58904828 41 CATTGGGCGCGCCGGGACTGTGAGACGACAGGCTGTGGATG CATTGGGCGCGCCGGGACTGTAAGACGACAGGCTGTGGATG < 41bp 0.431932406102963 0.840445148822295 0.34485254 0.8458407 prediction 0.680890297644591 Functional Gain - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904808 chr19:58904809 synonymous SNV . 0 22 hPsi_associated_SNPs_24048 0 0 1 0 2 Ribosome 0.437749374259959 0.438419667663408 0.6916814 0 hPsi_site_17772 iPseU_CNN:0.6916814;iRNA_PseU:0 17773 chr15 40675101 40675101 1 + G A LUAD 40675100 + 40675080 40675120 41 CAACATGGCTGTCTACAGAGTGCGATTCCCACCCACTTCCG CAACATGGCTGTCTACAGAGTACGATTCCCACCCACTTCCG < 41bp 0.548514279721452 0.888955763190019 0.45693833 0.8519981 prediction 0.680882966937135 Functional Gain - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40675100 chr15:40675101 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24049 0 0 0 0 0 Ribosome 0.438719753259235 0.438714844531329 0.7039962 0 hPsi_site_17773 iPseU_CNN:0.7039962;iRNA_PseU:0 17774 chr2 17830817 17830817 1 + G A LUSC 17830816 + 17830796 17830836 41 GGGCAGCTTTGAGCAGAAGCTGAACTGGGCCTTCAATATGT GGGCAGCTTTGAGCAGAAGCTAAACTGGGCCTTCAATATGT < 41bp 0.440081567138276 0.840436497925269 0.2072751 0.31360337 prediction 0.680872995850537 Functional Gain - VSNL1 ENSG00000163032 CDS Human protein_coding chr2:17830816 chr2:17830817 synonymous SNV . 0 22 hPsi_associated_SNPs_24050 0 0 1 0 1 cytosol 0.436016219245888 0.438718277263675 0 0 hPsi_site_17774 iPseU_CNN:0;iRNA_PseU:0 17775 chrX 50653980 50653980 1 + C A UCEC 50653979 + 50653959 50653999 41 AGCCCCGGCTCCTAGGGCATTCACTGCGGTACATGCTGGAG AGCCCCGGCTCCTAGGGCATTAACTGCGGTACATGCTGGAG < 41bp 0.484843411230446 0.840427653863859 0.09912288 0.22631854 prediction 0.680855307727719 Functional Gain - BMP15 ENSG00000130385 CDS Human protein_coding chrX:50653979 chrX:50653980 stopgain 0.003 0 22 hPsi_associated_SNPs_24051 0 0 0 0 0 exosome 0.438718593003028 0.438718592995102 0 0 hPsi_site_17775 iPseU_CNN:0;iRNA_PseU:0 17776 chr9 130206323 130206323 1 + C A UCEC 130206322 + 130206302 130206342 41 TTTCAGGCTGGAAGATTATATCTGGATCACCACCAGAGCAA TTTCAGGCTGGAAGATTATATATGGATCACCACCAGAGCAA < 41bp 0.503174371705888 0.843601807664871 0.25744718 0.3639279 prediction 0.680854871917966 Functional Gain - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130206322 chr9:130206323 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_24052 0 0 0 0 1 cytosol 0.438719330594088 0.438795338557046 0 0 hPsi_site_17776 iPseU_CNN:0;iRNA_PseU:0 17777 chr10 118351366 118351366 1 + C A UCEC 118351365 + 118351345 118351385 41 GCAATCAGGCCCCTGAAAATTCTCCCCTGGAGCCCTGAGAA GCAATCAGGCCCCTGAAAATTATCCCCTGGAGCCCTGAGAA < 41bp 0.481786111433048 0.840420966191055 0.30658174 0.34222466 prediction 0.680841932382111 Functional Gain - PNLIPRP1 ENSG00000187021 CDS Human protein_coding chr10:118351365 chr10:118351366 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_24053 0 0 0 0 2 unknown 0.438719416451726 0.438718458705583 0 0 hPsi_site_17777 iPseU_CNN:0;iRNA_PseU:0 17778 chr20 39797752 39797752 1 + G A rs35738919 39797751 + 39797731 39797771 41 CTACGGAGGGAAGAAGCAGCTGTGGTTCCCATCAAACTACG CTACGGAGGGAAGAAGCAGCTATGGTTCCCATCAAACTACG < 41bp 0.560599965449228 0.90102009497 0.5467618 0.6218988 prediction 0.680840259041545 Functional Gain - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39797751 chr20:39797752 synonymous SNV . 0 22 hPsi_associated_SNPs_24054 0 0 1 0 2 Cytosol 0.438718592997894 0.438718592995535 0.150274 0 hPsi_site_17778 iPseU_CNN:0.150274;iRNA_PseU:0 17779 chrX 69639612 69639612 1 + C A UCEC 69639611 + 69639591 69639631 41 ATTGAGCTTCTTTAATCCCGTCTGTGCCACCCCCAATAGCA ATTGAGCTTCTTTAATCCCGTATGTGCCACCCCCAATAGCA < 41bp 0.518460897418355 0.858880678334182 0.20525214 0.63523144 prediction 0.680839561831654 Functional Gain - KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639611 chrX:69639612 synonymous SNV . 0 22 hPsi_associated_SNPs_24055 0 0 1 0 1 chromatin 0.438718512257094 0.438718724924466 0.27046288 0 hPsi_site_17779 iPseU_CNN:0.27046288;iRNA_PseU:0 17780 chr6 88767377 88767377 1 + G A SKCM 88767376 + 88767356 88767396 41 ACAAATGGATGCCCTGGTGGTGAATCCAAGTGTGTTGTACG ACAAATGGATGCCCTGGTGGTAAATCCAAGTGTGTTGTACG < 41bp 0.548983001646027 0.889390742133339 0.2523098 0.61099094 prediction 0.680815480974623 Functional Gain - SPACA1 ENSG00000118434 CDS Human protein_coding chr6:88767376 chr6:88767377 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24056 0 0 0 0 2 unknown 0.438796089231422 0.438718632015417 0.22198188 0 hPsi_site_17780 iPseU_CNN:0.22198188;iRNA_PseU:0 17781 chr6 42797104 42797104 1 + G A OV 42797103 + 42797083 42797123 41 GTACAACAAGGGATCTCTTTTGCTTCTGCAAGCTCACCCCA GTACAACAAGGGATCTCTTTTACTTCTGCAAGCTCACCCCA < 41bp 0.556244107741494 0.896651645487013 0.44381273 0.5917001 prediction 0.680815075491038 Functional Gain - BICRAL ENSG00000112624 CDS Human protein_coding chr6:42797103 chr6:42797104 nonsynonymous SNV 0.896 3 22 hPsi_associated_SNPs_24057 0 0 1 0 0 unknown 0.438717445533475 0.438713621182129 0.1834002 0 hPsi_site_17781 iPseU_CNN:0.1834002;iRNA_PseU:0 17782 chr6 25727344 25727344 1 + G A LUAD 25727343 + 25727323 25727363 41 ATTATGAATTCCTTCGTCACTGATATCTTTGAGCGTATAGC ATTATGAATTCCTTCGTCACTAATATCTTTGAGCGTATAGC < 41bp 0.469613737490861 0.840403540887884 0.23182258 0.24485832 prediction 0.680807081775769 Functional Gain - HIST1H2BA ENSG00000146047 CDS Human protein_coding chr6:25727343 chr6:25727344 nonsynonymous SNV 0.146 4 22 hPsi_associated_SNPs_24058 0 0 0 0 0 Cytosol 0.43871859545733 0.438714894971181 0 0 hPsi_site_17782 iPseU_CNN:0;iRNA_PseU:0 17783 chr12 56531325 56531325 1 + G A LUAD 56531324 + 56531304 56531344 41 TTAGAGGCCCAGGACCTGATTGCCAAAGACCGTTTCTTGGG TTAGAGGCCCAGGACCTGATTACCAAAGACCGTTTCTTGGG < 41bp 0.423692511841526 0.840400279810197 0.24872479 0.39304584 prediction 0.680800559620394 Functional Gain - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531324 chr12:56531325 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24059 0 0 1 0 1 Endoplasmic reticulum 0.438718487783385 0.438717485651219 0 0 hPsi_site_17783 iPseU_CNN:0;iRNA_PseU:0 17784 chr17 54671747 54671747 1 + G A COAD 54671746 + 54671726 54671766 41 GAACACCCAGACCCTATCTTTGACCCCAAGGAAAAGGATCT GAACACCCAGACCCTATCTTTAACCCCAAGGAAAAGGATCT < 41bp 0.544378444144908 0.884778649224287 0.24636096 0.37580284 prediction 0.680800410158757 Functional Gain - NOG ENSG00000183691 CDS Human protein_coding chr17:54671746 chr17:54671747 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24060 0 0 0 0 0 exosome 0.438718592964541 0.438718592995102 0 0 hPsi_site_17784 iPseU_CNN:0;iRNA_PseU:0 17785 chr16 89590493 89590493 1 + G A BLCA 89590492 + 89590472 89590512 41 GCTGGTCATCGCGGTTGTCATGAGCCTCCTGAATGCTCTCA GCTGGTCATCGCGGTTGTCATAAGCCTCCTGAATGCTCTCA < 41bp 0.439235349432084 0.840397599860627 0.21919355 0.3221913 prediction 0.680795199721253 Functional Gain - SPG7 ENSG00000197912 CDS Human protein_coding chr16:89590492 chr16:89590493 nonsynonymous SNV 0.955 1 22 hPsi_associated_SNPs_24061 0 0 1 0 1 Nucleus 0.43866247530341 0.438717459711204 0 0 hPsi_site_17785 iPseU_CNN:0;iRNA_PseU:0 17786 chr4 41983819 41983819 1 + G A SKCM 41983818 + 41983798 41983838 41 CCGCAGGAGGAAATGGAGGCTGAAAGGCTGCGACTCCTCGA CCGCAGGAGGAAATGGAGGCTAAAAGGCTGCGACTCCTCGA < 41bp 0.468539648034854 0.840390139435529 0.26855326 0.5271211 prediction 0.680780278871058 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41983818 chr4:41983819 nonsynonymous SNV 0.110 0 22 hPsi_associated_SNPs_24062 0 0 0 0 0 Nucleus 0.43871859264987 0.438718593594882 0.0542422 0 hPsi_site_17786 iPseU_CNN:0.0542422;iRNA_PseU:0 17787 chr10 35896812 35896812 1 + G A BLCA 35896811 + 35896791 35896831 41 CGGCCTCCGGGCAGAGACGCTGCCCGCGGCCATTCGGGGAG CGGCCTCCGGGCAGAGACGCTACCCGCGGCCATTCGGGGAG < 41bp 0.464300599913139 0.840383389917412 0.24812734 0.6710336 prediction 0.680766779834824 Functional Gain - GJD4 ENSG00000177291 CDS Human protein_coding chr10:35896811 chr10:35896812 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_24063 0 0 0 0 0 exosome 0.438720760928838 0.438723881030897 0.3420672 0 hPsi_site_17787 iPseU_CNN:0.3420672;iRNA_PseU:0 17788 chr22 20130869 20130869 1 + C A THYM 20130868 + 20130848 20130888 41 GCGCTCCCAGGCCGACTCACTCTTCGGCGACTCAGGCGTCT GCGCTCCCAGGCCGACTCACTATTCGGCGACTCAGGCGTCT < 41bp 0.490519855367699 0.840379714037793 0.67601585 0.8488759 prediction 0.680759428075586 Functional Gain - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20130868 chr22:20130869 synonymous SNV . 0 22 hPsi_associated_SNPs_24064 0 0 1 0 0 Endoplasmic reticulum 0.438701772402578 0.438909563427877 0.3457201 0 hPsi_site_17788 iPseU_CNN:0.3457201;iRNA_PseU:0 Gout 17789 chr2 232458451 232458451 1 + G A rs111680687 232458450 + 232458430 232458470 41 AAGGCCCCTGGACTCCAGCCTGTACACGGCCAGTGAGGAGA AAGGCCCCTGGACTCCAGCCTATACACGGCCAGTGAGGAGA < 41bp 0.537324907561565 0.877700911185499 0.12063688 0.21155775 prediction 0.680752007247869 Functional Gain - TEX44 ENSG00000177673 CDS Human protein_coding chr2:232458450 chr2:232458451 synonymous SNV . 0 22 hPsi_associated_SNPs_24065 0 0 0 0 0 unknown 0.438718657120331 0.438717250270839 0 0 hPsi_site_17789 iPseU_CNN:0;iRNA_PseU:0 17790 chr7 150439714 150439714 1 + G A SKCM 150439713 + 150439693 150439733 41 TTAGGGGGCCAGGCCCTGGATGACTATGTAGCAAACACGGA TTAGGGGGCCAGGCCCTGGATAACTATGTAGCAAACACGGA < 41bp 0.442755276069222 0.840374902415427 0.17715001 0.33018607 prediction 0.680749804830853 Functional Gain - GIMAP1-GIMAP5;GIMAP5 ENSG00000196329 CDS Human protein_coding chr7:150439713 chr7:150439714 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_24066 0 0 0 0 0 unknown 0.438718691938758 0.438718592682324 0 0 hPsi_site_17790 iPseU_CNN:0;iRNA_PseU:0 17791 chr2 73475031 73475031 1 + G A STAD 73475030 + 73475010 73475050 41 AAAGCTGAGAAAGACAATGCTGAGATAAGAGTCCACACAGT AAAGCTGAGAAAGACAATGCTAAGATAAGAGTCCACACAGT < 41bp 0.434647765163028 0.840372501729761 0.25278413 0.26664573 prediction 0.680745003459521 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73475030 chr2:73475031 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_24067 0 0 1 0 1 Cytosol 0.438706475157432 0.438788604822192 0 0 hPsi_site_17791 iPseU_CNN:0;iRNA_PseU:0 17792 chr18 662235 662235 1 + C A UCEC 662234 + 662214 662254 41 CTTTTTGGACAGCCTGGGATTCTCCACCAGAGAAGAAGGGG CTTTTTGGACAGCCTGGGATTATCCACCAGAGAAGAAGGGG < 41bp 0.514377100998978 0.85474416277758 0.24289724 0.43993145 prediction 0.680734123557204 Functional Gain - TYMS ENSG00000176890 CDS Human protein_coding chr18:662234 chr18:662235 nonsynonymous SNV 0.582 1 22 hPsi_associated_SNPs_24068 0 0 1 0 2 Ribosome 0.438720314737167 0.438511160647563 0 0 hPsi_site_17792 iPseU_CNN:0;iRNA_PseU:0 17793 chr5 52097534 52097534 1 + G A CESC 52097533 + 52097513 52097553 41 GTGGACAGTGTGAAAGAGAATGCAGGCACCGTTAGGATATT GTGGACAGTGTGAAAGAGAATACAGGCACCGTTAGGATATT < 41bp 0.454172328260634 0.840362778518819 0.4140239 0.59105694 prediction 0.680725557037637 Functional Gain - PELO ENSG00000152684 CDS Human protein_coding chr5:52097533 chr5:52097534 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_24069 0 0 1 0 0 Ribosome 0.438799972629045 0.438730852274875 0.18211388 0 hPsi_site_17793 iPseU_CNN:0.18211388;iRNA_PseU:0 17794 chr14 59789890 59789890 1 + C A UCEC 59789889 + 59789869 59789909 41 CCCGGGGGCCACAAGAAGGTTCTGCAGGCCATGCTGCACTA CCCGGGGGCCACAAGAAGGTTATGCAGGCCATGCTGCACTA < 41bp 0.514261284121726 0.854604265496475 0.5777607 0.51281875 prediction 0.680685962749498 Functional Gain - DAAM1 ENSG00000100592 CDS Human protein_coding chr14:59789889 chr14:59789890 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_24070 0 0 1 0 1 Cytosol 0.438718592974244 0.438718513572155 0 0 hPsi_site_17794 iPseU_CNN:0;iRNA_PseU:0 17795 chr1 226016460 226016460 1 + G A rs200493338 226016459 + 226016439 226016479 41 AGAAATCCTCCTCACTTCAGTGCTGGGCTTTGCCATCTACT AGAAATCCTCCTCACTTCAGTACTGGGCTTTGCCATCTACT < 41bp 0.553515457750645 0.893857004005616 0.34972593 0.6953676 prediction 0.680683092509941 Functional Gain - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016459 chr1:226016460 synonymous SNV . 0 22 hPsi_associated_SNPs_24071 0 0 1 0 1 Endoplasmic reticulum 0.438718532391113 0.438718818079697 0.3907352 0 hPsi_site_17795 iPseU_CNN:0.3907352;iRNA_PseU:0 17796 chrX 100646487 100646487 1 + G A UCEC 100646486 + 100646466 100646506 41 GCCGGACTTTCTGTAAGAAGTGTGGCAAGCACCAACCCCAT GCCGGACTTTCTGTAAGAAGTATGGCAAGCACCAACCCCAT < 41bp 0.442203439844903 0.840336252089782 0.29095852 0.36605388 prediction 0.680672504179564 Functional Gain - RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646486 chrX:100646487 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24072 0 0 1 0 1 unknown 0.438718593935285 0.438718592990856 0 0 hPsi_site_17796 iPseU_CNN:0;iRNA_PseU:0 17797 chr7 143175776 143175776 1 + G A UCEC 143175775 + 143175755 143175795 41 TTTTACTGGCCATGGCAAATTGCAGTCTACCTGTGCATATC TTTTACTGGCCATGGCAAATTACAGTCTACCTGTGCATATC < 41bp 0.524101196550746 0.864421333906838 0.32819757 0.5620571 prediction 0.680640274712183 Functional Gain - TAS2R41 ENSG00000221855 CDS Human protein_coding chr7:143175775 chr7:143175776 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_24073 0 0 0 0 0 exosome 0.438444566486436 0.438564743469609 0.1241142 0 hPsi_site_17797 iPseU_CNN:0.1241142;iRNA_PseU:0 17798 chr11 55563167 55563167 1 + G A LUAD 55563166 + 55563146 55563186 41 ATCACAGTGGTAGGAAACCTTGGGATGATCATAATAATCAA ATCACAGTGGTAGGAAACCTTAGGATGATCATAATAATCAA < 41bp 0.479505757974773 0.840316666331289 0.2464169 0.2716763 prediction 0.680633332662579 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563166 chr11:55563167 nonsynonymous SNV 0.545 3 22 hPsi_associated_SNPs_24074 0 0 0 0 0 unknown 0.438718582914402 0.438718604309382 0 0 hPsi_site_17798 iPseU_CNN:0;iRNA_PseU:0 17799 chr19 8841633 8841633 1 + G A SKCM 8841632 + 8841612 8841652 41 CATGGTCACCATCCCCAAGATGGCATCAGACTTTCTGCGGG CATGGTCACCATCCCCAAGATAGCATCAGACTTTCTGCGGG < 41bp 0.5372763904243 0.877592903947406 0.1851157 0.22179174 prediction 0.680633027046212 Functional Gain - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8841632 chr19:8841633 nonsynonymous SNV 0.697 2 22 hPsi_associated_SNPs_24075 0 0 0 0 0 unknown 0.438355055494375 0.438718591539336 0 0 hPsi_site_17799 iPseU_CNN:0;iRNA_PseU:0 17800 chrX 77369334 77369334 1 + G A CESC 77369333 + 77369313 77369353 41 CCTAGGCCGGCCTGATGGTGTGCCCATGCCTGACAAGTACT CCTAGGCCGGCCTGATGGTGTACCCATGCCTGACAAGTACT < 41bp 0.435821026824962 0.8403008838804 0.2061063 0.40754098 prediction 0.680601767760801 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77369333 chrX:77369334 synonymous SNV . 0 22 hPsi_associated_SNPs_24076 0 0 1 0 2 Ribosome 0.438718592995105 0.438718592993521 0 0 hPsi_site_17800 iPseU_CNN:0;iRNA_PseU:0 17801 chr1 12856310 12856310 1 + G A rs528121578 12856309 + 12856289 12856329 41 AATTTGAGACAGGGTTTCGCTGTGTTGCTCCAGCTGGTCTC AATTTGAGACAGGGTTTCGCTATGTTGCTCCAGCTGGTCTC < 41bp 0.500540984364089 0.840836103762217 0.3044392 0.3707858 prediction 0.680590238796254 Functional Gain - PRAMEF1 ENSG00000116721 UTR3 Human protein_coding chr1:12856309 chr1:12856310 . . 0 22 hPsi_associated_SNPs_24077 0 0 0 0 0 unknown 0.438723877646231 0.438718601872793 0 0 hPsi_site_17801 iPseU_CNN:0;iRNA_PseU:0 17802 chr1 204379892 204379892 1 + G A BLCA 204379891 + 204379871 204379911 41 CAGCAAATAGGATACCACACTGAAATTGTCTATGCGTTGAA CAGCAAATAGGATACCACACTAAAATTGTCTATGCGTTGAA < 41bp 0.478148509151624 0.840294501952284 0.25797588 0.30562812 prediction 0.680589003904568 Functional Gain - PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204379891 chr1:204379892 synonymous SNV . 0 22 hPsi_associated_SNPs_24078 0 0 0 0 0 Ribosome 0.438718701207133 0.438718980281738 0 0 hPsi_site_17802 iPseU_CNN:0;iRNA_PseU:0 17803 chr18 60241471 60241471 1 + G A STAD 60241470 + 60241450 60241490 41 GTATCAGCATATTTCTTTTATGCCAACGTTACACTGTGTCA GTATCAGCATATTTCTTTTATACCAACGTTACACTGTGTCA < 41bp 0.448937198607554 0.840290354174287 0.16874811 0.22074568 prediction 0.680580708348574 Functional Gain - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60241470 chr18:60241471 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24079 0 0 1 0 0 chromatin 0.434989076154233 0.43743435344825 0 0 hPsi_site_17803 iPseU_CNN:0;iRNA_PseU:0 17804 chrX 49028382 49028382 1 + G A UCEC 49028381 + 49028361 49028401 41 AGCGCCTCTCGGCTCCTGGCTGCTGGGCCGCCTGCACCAAC AGCGCCTCTCGGCTCCTGGCTACTGGGCCGCCTGCACCAAC < 41bp 0.544546018146012 0.88482225927563 0.25821096 0.77360225 prediction 0.680552482259237 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49028381 chrX:49028382 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_24080 0 0 1 0 1 Ribosome 0.438698578864954 0.438690192304676 0.5472045 0 hPsi_site_17804 iPseU_CNN:0.5472045;iRNA_PseU:0 17805 chr1 247752262 247752262 1 + G A LUSC 247752261 + 247752241 247752281 41 GGCACCACGTTTAACGAGGCTGAGCTTTTTGTGGCTAGTAT GGCACCACGTTTAACGAGGCTAAGCTTTTTGTGGCTAGTAT < 41bp 0.52115975827473 0.861435456696664 0.3395118 0.5269399 prediction 0.680551396843867 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247752261 chr1:247752262 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_24081 0 0 0 0 0 unknown 0.436743434828917 0.438718613669786 0.0538798 0 hPsi_site_17805 iPseU_CNN:0.0538798;iRNA_PseU:0 17806 chr9 95776238 95776238 1 + G A rs41273400 95776237 + 95776217 95776257 41 GGAGGGCCAAATCCAGAAACTGTCAGCCAAGAACGGCACCC GGAGGGCCAAATCCAGAAACTATCAGCCAAGAACGGCACCC < 41bp 0.559614846410132 0.899890339007054 0.3341977 0.4789077 prediction 0.680550985193845 Functional Gain - FGD3 ENSG00000127084 CDS Human protein_coding chr9:95776237 chr9:95776238 synonymous SNV . 0 22 hPsi_associated_SNPs_24082 0 0 0 0 1 exosome 0.438718592172446 0.438718584300389 0 0 hPsi_site_17806 iPseU_CNN:0;iRNA_PseU:0 17807 chr19 42856512 42856512 1 + G A BLCA 42856511 + 42856491 42856531 41 GTCGCCTGGGCCTGGCCCGGTGCCACCCGCGGGCGACCTGC GTCGCCTGGGCCTGGCCCGGTACCACCCGCGGGCGACCTGC < 41bp 0.547144949829399 0.887420001480032 0.6260189 0.8990916 prediction 0.680550103301266 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42856511 chr19:42856512 nonsynonymous SNV 0.950 5 22 hPsi_associated_SNPs_24083 0 0 0 0 1 Endoplasmic reticulum 0.438033282063431 0.438636493173641 0.5461454 0 hPsi_site_17807 iPseU_CNN:0.5461454;iRNA_PseU:0 17808 chr11 47296508 47296508 1 + G A COAD 47296507 + 47296487 47296527 41 AGTGCTGACTCTACCCCTGATGTGAACCAGTCTCCTCGGGG AGTGCTGACTCTACCCCTGATATGAACCAGTCTCCTCGGGG < 41bp 0.545581552903975 0.885847984041041 0.34494254 0.76474184 prediction 0.680532862274132 Functional Gain - MADD ENSG00000110514 CDS Human protein_coding chr11:47296507 chr11:47296508 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_24084 0 0 1 0 0 Nucleus 0.438711249454408 0.438739992461831 0.52948368 0 hPsi_site_17808 iPseU_CNN:0.52948368;iRNA_PseU:0 17809 chr3 97983449 97983449 1 + G A SKCM 97983448 + 97983428 97983468 41 CTTCTTAGCTAAGAGTAAGATGATATCTCTCTCTGAATGCA CTTCTTAGCTAAGAGTAAGATAATATCTCTCTCTGAATGCA < 41bp 0.521481331791288 0.861747055998581 0.21275157 0.27834737 prediction 0.680531448414586 Functional Gain - OR5H6 ENSG00000230301 CDS Human protein_coding chr3:97983448 chr3:97983449 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24085 0 0 0 0 0 unknown 0.438719284343599 0.438718864495496 0 0 hPsi_site_17809 iPseU_CNN:0;iRNA_PseU:0 17810 chrX 120182082 120182082 1 + G A UCEC 120182081 + 120182061 120182101 41 GTTGATGTGCCGTTTGGGGGTGCTAAAGCTGGTGTTAAGAT GTTGATGTGCCGTTTGGGGGTACTAAAGCTGGTGTTAAGAT < 41bp 0.541692154406823 0.881956150801331 0.23062065 0.44295362 prediction 0.680527992789015 Functional Gain - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120182081 chrX:120182082 nonsynonymous SNV 0.208 5 22 hPsi_associated_SNPs_24086 0 0 0 0 0 Ribosome 0.438718147226659 0.438647059609658 0 0 hPsi_site_17810 iPseU_CNN:0;iRNA_PseU:0 17811 chr9 136319700 136319700 1 + G A STAD 136319699 + 136319679 136319719 41 GCCAGTGTCCCCTGTCTCATTGCCGACTGCACCTACCGCTG GCCAGTGTCCCCTGTCTCATTACCGACTGCACCTACCGCTG < 41bp 0.538443351379772 0.878706865841611 0.25389436 0.3447154 prediction 0.680527028923678 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136319699 chr9:136319700 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_24087 0 0 0 0 1 nucleus 0.438810259017215 0.438875413368319 0 0 hPsi_site_17811 iPseU_CNN:0;iRNA_PseU:0 17812 chr7 106786797 106786797 1 + G A LUSC 106786796 + 106786776 106786816 41 AATGTGATGGTGTTGGAAGATGTGTTGGTAACTATGATAAT AATGTGATGGTGTTGGAAGATATGTTGGTAACTATGATAAT < 41bp 0.547639565749212 0.88789358949106 0.3166119 0.41230795 prediction 0.680508047483696 Functional Gain - PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106786796 chr7:106786797 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24088 0 0 1 0 1 Ribosome 0.438193541575955 0.438719798054822 0 0 hPsi_site_17812 iPseU_CNN:0;iRNA_PseU:0 17813 chr13 25670507 25670507 1 + G A CESC 25670506 + 25670486 25670526 41 CTCCTCCAACTACGCGTATGTGAACTTCCAGCATACGAAGG CTCCTCCAACTACGCGTATGTAAACTTCCAGCATACGAAGG < 41bp 0.456450895407333 0.840242815322304 0.386672 0.68752086 prediction 0.680485630644608 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25670506 chr13:25670507 synonymous SNV . 0 22 hPsi_associated_SNPs_24089 0 0 0 0 0 Cytosol 0.438718591122665 0.438718592943856 0.37504172 0 hPsi_site_17813 iPseU_CNN:0.37504172;iRNA_PseU:0 17814 chr2 7023540 7023540 1 + C A GBM 7023539 + 7023519 7023559 41 TTTTCAGGTGGAGAGCCATTTCTTCAAGACCGGGGAGAATA TTTTCAGGTGGAGAGCCATTTATTCAAGACCGGGGAGAATA < 41bp 0.497261229857144 0.840239316162143 0.34010774 0.60116804 prediction 0.680478632324286 Functional Gain - RSAD2 ENSG00000134321 CDS Human protein_coding chr2:7023539 chr2:7023540 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_24090 0 0 1 0 1 exosome 0.438718592994942 0.438718592998461 0.20233608 0 hPsi_site_17814 iPseU_CNN:0.20233608;iRNA_PseU:0 17815 chr14 105268104 105268104 1 + G A rs10141867 105268103 + 105268083 105268123 41 GTCAGACCAGGCCCTGGACCTGTCGTTGAAGTCTGGCCCAA GTCAGACCAGGCCCTGGACCTATCGTTGAAGTCTGGCCCAA < 41bp 0.550743418603637 0.890981948731241 0.3249576 0.613903 prediction 0.680477060255207 Functional Gain - ZBTB42 ENSG00000179627 CDS Human protein_coding chr14:105268103 chr14:105268104 synonymous SNV . 0 22 hPsi_associated_SNPs_24091 0 0 1 0 0 chromatin 0.438719201245571 0.4387187034726 0.227806 0 hPsi_site_17815 iPseU_CNN:0.227806;iRNA_PseU:0 17816 chr8 144457746 144457746 1 + C A rs34876718 144457745 + 144457725 144457765 41 CTGTGACTCCCTGACGCAGATCCAGTGCGGCCAGCTGCAGA CTGTGACTCCCTGACGCAGATACAGTGCGGCCAGCTGCAGA < 41bp 0.496718212844922 0.840238364805144 0.34925914 0.50975835 prediction 0.680476729610287 Functional Gain - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144457745 chr8:144457746 synonymous SNV . 0 22 hPsi_associated_SNPs_24092 0 0 0 0 2 Ribosome 0.43887893376119 0.438526349905683 0.0195167000000001 0 hPsi_site_17816 iPseU_CNN:0.0195167000000001;iRNA_PseU:0 17817 chr17 902174 902174 1 + G A UCEC 902173 + 902153 902193 41 TATGCCAAAAATTTCGCCATTGTGGGAGCCATGTTTTCTTG TATGCCAAAAATTTCGCCATTATGGGAGCCATGTTTTCTTG < 41bp 0.44658827254123 0.84023757946683 0.2122246 0.26068676 prediction 0.68047515893366 Functional Gain - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:902173 chr17:902174 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24093 0 0 1 0 1 Cytosol 0.438718592995095 0.438718592995081 0 0 hPsi_site_17817 iPseU_CNN:0;iRNA_PseU:0 17818 chr1 180155212 180155212 1 + G A STAD 180155211 + 180155191 180155231 41 CAAGATCTACATGGCTGACCTGGAATCTGCACTGCACTACA CAAGATCTACATGGCTGACCTAGAATCTGCACTGCACTACA < 41bp 0.433068373746841 0.840233428513564 0.19414663 0.23655847 prediction 0.680466857027128 Functional Gain - QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180155211 chr1:180155212 synonymous SNV . 0 22 hPsi_associated_SNPs_24094 0 0 1 0 1 Ribosome 0.438718592516363 0.438719675734575 0 0 hPsi_site_17818 iPseU_CNN:0;iRNA_PseU:0 17819 chr6 116720749 116720749 1 + C A UCEC 116720748 + 116720728 116720768 41 CTTGGGTGCCTTGGCAATGTTCTGTGTGCTGTATCCTGAGA CTTGGGTGCCTTGGCAATGTTATGTGTGCTGTATCCTGAGA < 41bp 0.507780333246568 0.848008610053167 0.35151494 0.6553414 prediction 0.680456553613198 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116720748 chr6:116720749 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24095 0 0 1 0 1 nucleolus 0.438718599925443 0.438708933655302 0.3106828 0 hPsi_site_17819 iPseU_CNN:0.3106828;iRNA_PseU:0 17820 chr20 31024803 31024803 1 + C A UCEC 31024802 + 31024782 31024822 41 GAGCCTCTGGAGCCTTCTTCTCTCCCCTCCCAACTCAGCAT GAGCCTCTGGAGCCTTCTTCTATCCCCTCCCAACTCAGCAT < 41bp 0.494267246433256 0.840224072562611 0.46606085 0.6115478 prediction 0.680448145125223 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024802 chr20:31024803 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_24096 0 0 1 0 0 Nucleus 0.438718592995102 0.43871859293133 0.2230956 0 hPsi_site_17820 iPseU_CNN:0.2230956;iRNA_PseU:0 17821 chr6 150715281 150715281 1 + C A UCEC 150715280 + 150715260 150715300 41 GATACTGCCCCTATTTTGATTCTCATTTTCAAACAAGTACA GATACTGCCCCTATTTTGATTATCATTTTCAAACAAGTACA < 41bp 0.500438832129142 0.840652635577451 0.24043852 0.3890676 prediction 0.680427606896618 Functional Gain - IYD ENSG00000009765 CDS Human protein_coding chr6:150715280 chr6:150715281 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24097 0 0 0 0 1 exosome 0.438696094917862 0.438718251750881 0 0 hPsi_site_17821 iPseU_CNN:0;iRNA_PseU:0 17822 chr1 79121152 79121152 1 + G A LUSC 79121151 + 79121131 79121171 41 GAAGGCGGCCTGTGCAGGGATGACATATTCTATATCTTGAA GAAGGCGGCCTGTGCAGGGATAACATATTCTATATCTTGAA < 41bp 0.551894960587376 0.892105935852844 0.31467348 0.3215688 prediction 0.680421950530935 Functional Gain - IFI44 ENSG00000137965 CDS Human protein_coding chr1:79121151 chr1:79121152 nonsynonymous SNV 0.010 4 22 hPsi_associated_SNPs_24098 0 0 0 0 1 exosome 0.438718593865093 0.43871855556039 0 0 hPsi_site_17822 iPseU_CNN:0;iRNA_PseU:0 17823 chr6 41304105 41304105 1 + C A BRCA 41304104 + 41304084 41304124 41 AGGACATTACTGGTGTAGAATCTACCGCCCTTCTGACAACT AGGACATTACTGGTGTAGAATATACCGCCCTTCTGACAACT < 41bp 0.499877563933509 0.840210226016164 0.49517208 0.60644644 prediction 0.680420452032329 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41304104 chr6:41304105 synonymous SNV . 0 22 hPsi_associated_SNPs_24099 0 0 0 0 1 exosome 0.438851448690861 0.438500116872502 0.21289288 0 hPsi_site_17823 iPseU_CNN:0.21289288;iRNA_PseU:0 17824 chr19 45287585 45287585 1 + G A LUSC 45287584 + 45287564 45287604 41 ATCGGCTATGTGAGCTCAGATGGCAGCATCCTGCAGACCAT ATCGGCTATGTGAGCTCAGATAGCAGCATCCTGCAGACCAT < 41bp 0.550041381477328 0.890249094747387 0.31670767 0.37944132 prediction 0.680415426540117 Functional Gain - CBLC ENSG00000142273 CDS Human protein_coding chr19:45287584 chr19:45287585 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_24100 0 0 0 0 2 Ribosome 0.438718588613547 0.438718893111387 0 0 hPsi_site_17824 iPseU_CNN:0;iRNA_PseU:0 17825 chr4 47559772 47559772 1 + C A UCEC 47559771 + 47559751 47559791 41 GGTCTGTCCGAAGATCAAGTTCTCCATCGCTTAACAGTGGG GGTCTGTCCGAAGATCAAGTTATCCATCGCTTAACAGTGGG < 41bp 0.506942334597617 0.847143704706977 0.5857928 0.6075295 prediction 0.680402740218718 Functional Gain - ATP10D ENSG00000145246 CDS Human protein_coding chr4:47559771 chr4:47559772 nonsynonymous SNV 0.476 1 22 hPsi_associated_SNPs_24101 0 0 0 0 1 exosome 0.439568544809529 0.438719280388987 0.0434733999999999 0 hPsi_site_17825 iPseU_CNN:0.0434733999999999;iRNA_PseU:0 17826 chr9 20923696 20923696 1 + C A rs117748510 20923695 + 20923675 20923715 41 AAAGGCAATGCGCTGTTAGCTCTAAGCAGCCTTGCTGTCGT AAAGGCAATGCGCTGTTAGCTATAAGCAGCCTTGCTGTCGT < 41bp 0.500422017126777 0.84061824184986 0.6774737 0.6564996 prediction 0.680392449446166 Functional Gain - FOCAD ENSG00000188352 CDS Human protein_coding chr9:20923695 chr9:20923696 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24102 0 0 0 0 2 Ribosome 0.438715751021486 0.438735601485608 0 0 hPsi_site_17826 iPseU_CNN:0;iRNA_PseU:0 17827 chr2 32339758 32339758 1 + C A BLCA 32339757 + 32339737 32339777 41 CCTTAACACACACTAGTAATTCACTGCCTCGTTCAAAAACA CCTTAACACACACTAGTAATTAACTGCCTCGTTCAAAAACA < 41bp 0.497970957256171 0.840193410624073 0.28840613 0.5618185 prediction 0.680386821248147 Functional Gain - SPAST ENSG00000021574 CDS Human protein_coding chr2:32339757 chr2:32339758 stopgain 1.000 0 22 hPsi_associated_SNPs_24103 0 0 1 0 1 Ribosome 0.438230708510912 0.438003086133345 0.123637 0 hPsi_site_17827 iPseU_CNN:0.123637;iRNA_PseU:0 17828 chr16 84695361 84695361 1 + G A rs150918515 84695360 + 84695340 84695380 41 CTGGCACAGCATGTGCAGCCTGGGTGACAGCATCTACTCCA CTGGCACAGCATGTGCAGCCTAGGTGACAGCATCTACTCCA < 41bp 0.453153168842388 0.840192734334807 0.28184456 0.33312792 prediction 0.680385468669614 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695360 chr16:84695361 synonymous SNV . 0 22 hPsi_associated_SNPs_24104 0 0 1 0 0 chromatin 0.438755575882804 0.43872033942944 0 0 hPsi_site_17828 iPseU_CNN:0;iRNA_PseU:0 17829 chr17 7803307 7803307 1 + C A UCEC 7803306 + 7803286 7803326 41 GGTTCCATCCGCTGGGCCTGTCTTGTGGTAGATGAGGCCCA GGTTCCATCCGCTGGGCCTGTATTGTGGTAGATGAGGCCCA < 41bp 0.472750656368291 0.840190441698795 0.3139893 0.81477046 prediction 0.68038088339759 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7803306 chr17:7803307 nonsynonymous SNV 0.946 5 22 hPsi_associated_SNPs_24105 0 0 1 0 2 Cytosol 0.438712019105185 0.438718675950918 0.62954092 0 hPsi_site_17829 iPseU_CNN:0.62954092;iRNA_PseU:0 17830 chr14 75365141 75365141 1 + C A UCEC 75365140 + 75365120 75365160 41 ACATAACCTCAAACTAGGCTTCATGTCGGCATTTGTGAAGG ACATAACCTCAAACTAGGCTTAATGTCGGCATTTGTGAAGG < 41bp 0.481967172901405 0.840185584366423 0.3025843 0.3611354 prediction 0.680371168732847 Functional Gain - DLST ENSG00000119689 CDS Human protein_coding chr14:75365140 chr14:75365141 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_24106 0 0 1 0 2 Ribosome 0.438718313461088 0.438718551635685 0 0 hPsi_site_17830 iPseU_CNN:0;iRNA_PseU:0 17831 chr14 45374651 45374651 1 + G A UCEC 45374650 + 45374630 45374670 41 CCAGATTGGTGGACATTGGATGCACTATGATGGGCTCAGAA CCAGATTGGTGGACATTGGATACACTATGATGGGCTCAGAA < 41bp 0.495827023024678 0.84017662370688 0.2751584 0.62512255 prediction 0.68035324741376 Functional Gain - C14orf28 ENSG00000179476 CDS Human protein_coding chr14:45374650 chr14:45374651 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24107 0 0 0 0 1 cytosol 0.438731302240011 0.438637267350305 0.2502451 0 hPsi_site_17831 iPseU_CNN:0.2502451;iRNA_PseU:0 17832 chr17 8168266 8168266 1 + G A BLCA 8168265 + 8168245 8168285 41 GCAGCAGTGCGTGGGGCCCCTGCAAACTCCTCTGGCAGATG GCAGCAGTGCGTGGGGCCCCTACAAACTCCTCTGGCAGATG < 41bp 0.43109186825175 0.840168628889989 0.30820984 0.49361727 prediction 0.680337257779978 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8168265 chr17:8168266 synonymous SNV . 0 22 hPsi_associated_SNPs_24108 0 0 1 0 1 Nucleus 0.438710017682778 0.438717308615088 0 0 hPsi_site_17832 iPseU_CNN:0;iRNA_PseU:0 17833 chr16 2819035 2819035 1 + C A rs200668425 2819034 + 2819014 2819054 41 CCAGCCCCAAAGGAGGCTGTTCGAGAGGGACGTCCTCCGGA CCAGCCCCAAAGGAGGCTGTTAGAGAGGGACGTCCTCCGGA < 41bp 0.502226876212765 0.842384780085658 0.41719115 0.6523428 prediction 0.680315807745786 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2819034 chr16:2819035 synonymous SNV . 0 22 hPsi_associated_SNPs_24109 0 0 1 0 0 Nucleus 0.438713965345111 0.438718595761708 0.3046856 0 hPsi_site_17833 iPseU_CNN:0.3046856;iRNA_PseU:0 17834 chr16 19702715 19702715 1 + C A BLCA 19702714 + 19702694 19702734 41 CTACGGGGGAGACTCCAAGTTCCTGGCAGAAAACAACAAGC CTACGGGGGAGACTCCAAGTTACTGGCAGAAAACAACAAGC < 41bp 0.481021124668451 0.84015687794636 0.3476727 0.77181816 prediction 0.68031375589272 Functional Gain - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19702714 chr16:19702715 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24110 0 0 0 0 2 Cytosol 0.438708644249092 0.439007363267941 0.54363632 0 hPsi_site_17834 iPseU_CNN:0.54363632;iRNA_PseU:0 17835 chr6 110538990 110538990 1 + C A UCEC 110538989 + 110538969 110539009 41 CTATGACAGGTATCTTAAGCTCTGGGACACTGAGACAGGTA CTATGACAGGTATCTTAAGCTATGGGACACTGAGACAGGTA < 41bp 0.489072475466232 0.840153432353322 0.143675 0.20897064 prediction 0.680306864706644 Functional Gain - CDC40 ENSG00000168438 CDS Human protein_coding chr6:110538989 chr6:110538990 synonymous SNV . 0 22 hPsi_associated_SNPs_24111 0 0 1 0 2 chromatin 0.438718594754607 0.438718611914088 0 0 hPsi_site_17835 iPseU_CNN:0;iRNA_PseU:0 17836 chr6 29080214 29080214 1 + G A SKCM 29080213 + 29080193 29080233 41 CAAGTAGATCACTTTTTCTGTGAAGTTCCAGCACTTCTGCG CAAGTAGATCACTTTTTCTGTAAAGTTCCAGCACTTCTGCG < 41bp 0.467274035832897 0.84015269716902 0.31058142 0.39435205 prediction 0.68030539433804 Functional Gain - OR2J3 ENSG00000204701 CDS Human protein_coding chr6:29080213 chr6:29080214 nonsynonymous SNV 0.790 3 22 hPsi_associated_SNPs_24112 0 0 0 0 0 unknown 0.438717734172989 0.438708136159788 0 0 hPsi_site_17836 iPseU_CNN:0;iRNA_PseU:0 17837 chr12 95228412 95228412 1 + G A LUSC 95228411 + 95228391 95228431 41 GCCTACCTGAAGAAGAAGCATGAGGAGGAAATCAATGCCCT GCCTACCTGAAGAAGAAGCATAAGGAGGAAATCAATGCCCT < 41bp 0.537539363048585 0.877690239466058 0.33942536 0.5728046 prediction 0.680301752834946 Functional Gain - KRT19P2 ENSG00000216306 ncRNA_exonic Human transcribed_processed_pseudogene chr12:95228411 chr12:95228412 . . 0 22 hPsi_associated_SNPs_24113 0 0 0 0 0 unknown 0.438717674711837 0.438718437309319 0.1456092 0 hPsi_site_17837 iPseU_CNN:0.1456092;iRNA_PseU:0 17838 chr13 51519601 51519601 1 + G A UCEC 51519600 + 51519580 51519620 41 AGCATTAAAAACCAATAATGTGAATGTCAGTTCCCGGGTAC AGCATTAAAAACCAATAATGTAAATGTCAGTTCCCGGGTAC < 41bp 0.438741560414818 0.840145431512536 0.24831283 0.44391552 prediction 0.680290863025072 Functional Gain - RNASEH2B ENSG00000136104 CDS Human protein_coding chr13:51519600 chr13:51519601 synonymous SNV . 0 22 hPsi_associated_SNPs_24114 0 0 1 0 2 Cytosol 0.438718690667518 0.438717492503695 0 0 hPsi_site_17838 iPseU_CNN:0;iRNA_PseU:0 17839 chr12 96900734 96900734 1 + G A UCEC 96900733 + 96900713 96900753 41 CTTTGAGTGGCAAAAATATGTGCAACTACCAGCTGGTCTGC CTTTGAGTGGCAAAAATATGTACAACTACCAGCTGGTCTGC < 41bp 0.470854106382965 0.840145320571062 0.28195363 0.6942847 prediction 0.680290641142123 Functional Gain - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:96900733 chr12:96900734 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24115 0 0 0 0 1 exosome 0.438823886057154 0.436946100148648 0.3885694 0 hPsi_site_17839 iPseU_CNN:0.3885694;iRNA_PseU:0 17840 chr19 55497648 55497648 1 + C A UCEC 55497647 + 55497627 55497667 41 GTTTCCCGCATTGTGTGAGGTCTTGAGACATCCAGAATGTA GTTTCCCGCATTGTGTGAGGTATTGAGACATCCAGAATGTA < 41bp 0.485504710634871 0.840142568001319 0.2590406 0.68989396 prediction 0.680285136002639 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55497647 chr19:55497648 synonymous SNV . 0 22 hPsi_associated_SNPs_24116 0 0 0 0 1 Cytosol 0.438718592479931 0.438717410794116 0.37978792 0 hPsi_site_17840 iPseU_CNN:0.37978792;iRNA_PseU:0 17841 chr1 155300288 155300288 1 + G A OV 155300287 + 155300267 155300307 41 CGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGG CGTGTCATCACCACAGTGGATAAGGACTGGCTCCGCTGTGG < 41bp 0.532820787778345 0.872962337819202 0.3197081 0.39424598 prediction 0.680283100081715 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155300287 chr1:155300288 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_24117 0 0 1 0 1 Cytosol 0.439129026506283 0.438790227026703 0 0 hPsi_site_17841 iPseU_CNN:0;iRNA_PseU:0 17842 chr2 85921552 85921552 1 + G A rs10181739 85921551 + 85921531 85921571 41 GCTGCCCCACCATGGCTACCTGGGCCCTCCTGCTCCTTGCA GCTGCCCCACCATGGCTACCTAGGCCCTCCTGCTCCTTGCA < 41bp 0.529570696719451 0.869706455235586 0.19496125 0.36835945 prediction 0.68027151703227 Functional Gain - GNLY ENSG00000115523 CDS Human protein_coding chr2:85921551 chr2:85921552 stopgain 0.013 0 22 hPsi_associated_SNPs_24118 0 0 0 0 1 exosome 0.438718540494102 0.438719666858923 0 0 hPsi_site_17842 iPseU_CNN:0;iRNA_PseU:0 17843 chrX 103359354 103359354 1 + G A LUSC 103359353 + 103359333 103359373 41 GCTTCTTTTAGGCGCTGAGCTGAATAGGGACCTGCGCTTCA GCTTCTTTTAGGCGCTGAGCTAAATAGGGACCTGCGCTTCA < 41bp 0.439333795056519 0.840129931329008 0.21993405 0.38929263 prediction 0.680259862658017 Functional Gain - ZCCHC18 ENSG00000166707 CDS Human protein_coding chrX:103359353 chrX:103359354 synonymous SNV . 0 22 hPsi_associated_SNPs_24119 0 0 0 0 0 exosome 0.438718671082747 0.438718001917707 0 0 hPsi_site_17843 iPseU_CNN:0;iRNA_PseU:0 17844 chr6 27114910 27114910 1 + G A rs36043209 27114909 + 27114889 27114929 41 TCAGTAAGTTGTGACCAGTATGTCTGGACGTGGCAAGCAAG TCAGTAAGTTGTGACCAGTATATCTGGACGTGGCAAGCAAG < 41bp 0.482423515321236 0.840126089492494 0.48448414 0.723035 prediction 0.680252178984988 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114909 chr6:27114910 nonsynonymous SNV 0.165 3 22 hPsi_associated_SNPs_24120 0 0 1 0 0 cytosol 0.438718587508141 0.438718562450285 0.44607 0 hPsi_site_17844 iPseU_CNN:0.44607;iRNA_PseU:0 17845 chr19 36606495 36606495 1 + G A ACC 36606494 + 36606474 36606514 41 GGGGGTGTCGGCACCCACGGTGACCGTTTTCATCAGCAGCT GGGGGTGTCGGCACCCACGGTAACCGTTTTCATCAGCAGCT < 41bp 0.452608895598082 0.840115952374719 0.30927354 0.7060963 prediction 0.680231904749437 Functional Gain - TBCB ENSG00000105254 CDS Human protein_coding chr19:36606494 chr19:36606495 synonymous SNV . 0 22 hPsi_associated_SNPs_24121 0 0 1 0 1 Ribosome 0.441343403834281 0.438698538672871 0.4121926 0 hPsi_site_17845 iPseU_CNN:0.4121926;iRNA_PseU:0 17846 chr2 113418129 113418129 1 + G A KIRP 113418128 + 113418108 113418148 41 CCAGACCATGGGGAAGGATCTGACACCGATCACACCCTCTA CCAGACCATGGGGAAGGATCTAACACCGATCACACCCTCTA < 41bp 0.433406959556763 0.840105700189777 0.2665598 0.51735693 prediction 0.680211400379554 Functional Gain - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113418128 chr2:113418129 synonymous SNV . 0 22 hPsi_associated_SNPs_24122 0 0 1 0 0 Ribosome 0.438471204904429 0.438791959403221 0.0347138600000001 0 hPsi_site_17846 iPseU_CNN:0.0347138600000001;iRNA_PseU:0 17847 chr1 248344106 248344106 1 + G A CESC 248344105 + 248344085 248344125 41 CTCCCCAACGCAGGACAAGATGGTGTCTGTATTCTACACCA CTCCCCAACGCAGGACAAGATAGTGTCTGTATTCTACACCA < 41bp 0.476391870256436 0.840102666704251 0.16403899 0.24112454 prediction 0.680205333408503 Functional Gain - OR2M2 ENSG00000198601 CDS Human protein_coding chr1:248344105 chr1:248344106 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24123 0 0 0 0 0 exosome 0.438718802998412 0.43871866689086 0 0 hPsi_site_17847 iPseU_CNN:0;iRNA_PseU:0 17848 chr11 74716673 74716673 1 + G A HNSC 74716672 + 74716652 74716692 41 TGGATGTTCATGGAGTGAGGTGAGGGACTTGACTGAGGAGG TGGATGTTCATGGAGTGAGGTAAGGGACTTGACTGAGGAGG < 41bp 0.437189568606973 0.840100641922346 0.2535052 0.5842312 prediction 0.680201283844691 Functional Gain - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74716672 chr11:74716673 synonymous SNV . 0 22 hPsi_associated_SNPs_24124 0 0 1 0 0 Nucleus 0.438739340205621 0.438777356393409 0.1684624 0 hPsi_site_17848 iPseU_CNN:0.1684624;iRNA_PseU:0 17849 chr16 89965042 89965042 1 + G A SKCM 89965041 + 89965021 89965061 41 CGCGCACGGCGCTGGAGTACTGCAAGCTCATCCTGAGGTGA CGCGCACGGCGCTGGAGTACTACAAGCTCATCCTGAGGTGA < 41bp 0.435727055512251 0.84009984255811 0.38399577 0.8105774 prediction 0.680199685116221 Functional Gain - TCF25 ENSG00000141002 CDS Human protein_coding chr16:89965041 chr16:89965042 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_24125 0 0 1 0 2 Cytosol 0.438000645639801 0.437503622910014 0.6211548 0 hPsi_site_17849 iPseU_CNN:0.6211548;iRNA_PseU:0 17850 chr22 41077422 41077422 1 + C A READ 41077421 + 41077401 41077441 41 TGTGTGGCTGTATGCCAGACTCATCCCCTTCCCAGGAGGTG TGTGTGGCTGTATGCCAGACTAATCCCCTTCCCAGGAGGTG < 41bp 0.486330235624791 0.840093161537859 0.21197361 0.46295056 prediction 0.680186323075717 Functional Gain - MCHR1 ENSG00000128285 CDS Human protein_coding chr22:41077421 chr22:41077422 synonymous SNV . 0 22 hPsi_associated_SNPs_24126 0 0 0 0 0 exosome 0.438718698856695 0.438735411185083 0 0 hPsi_site_17850 iPseU_CNN:0;iRNA_PseU:0 17851 chr11 5730683 5730683 1 + C A GBM 5730682 + 5730662 5730702 41 TGATCCCAAGGTTTTGACTCTCTTTATGGCTGTGCCTCCCT TGATCCCAAGGTTTTGACTCTATTTATGGCTGTGCCTCCCT < 41bp 0.508371820551075 0.848461587856431 0.23454672 0.22197655 prediction 0.680179534610712 Functional Gain - TRIM22 ENSG00000132274 CDS Human protein_coding chr11:5730682 chr11:5730683 synonymous SNV . 0 22 hPsi_associated_SNPs_24127 0 0 0 0 0 Cytosol 0.439869728137282 0.43869127546887 0 0 hPsi_site_17851 iPseU_CNN:0;iRNA_PseU:0 17852 chr11 608824 608824 1 + G A BLCA 608823 + 608803 608843 41 CCAGACCTCGGGGAAGGGAGTGCTCCCCCACCAGCAGCCTG CCAGACCTCGGGGAAGGGAGTACTCCCCCACCAGCAGCCTG < 41bp 0.43731803011866 0.840088844565993 0.42903984 0.81603265 prediction 0.680177689131985 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608823 chr11:608824 nonsynonymous SNV 0.148 0 22 hPsi_associated_SNPs_24128 0 0 1 0 0 Nucleus 0.438718592887239 0.438718592750226 0.6320653 0 hPsi_site_17852 iPseU_CNN:0.6320653;iRNA_PseU:0 17853 chr7 142983862 142983862 1 + C A LUSC 142983861 + 142983841 142983881 41 TCCACCCCCTGCCTATGATGTCTGCTTTGGTCACCCTGATG TCCACCCCCTGCCTATGATGTATGCTTTGGTCACCCTGATG < 41bp 0.517605284247058 0.857689914757481 0.27567542 0.45970482 prediction 0.680169261020846 Functional Gain - TMEM139 ENSG00000178826 CDS Human protein_coding chr7:142983861 chr7:142983862 synonymous SNV . 0 22 hPsi_associated_SNPs_24129 0 0 0 2 0 Ribosome 0.438694539044319 0.438722245560134 0 0 hPsi_site_17853 iPseU_CNN:0;iRNA_PseU:0 17854 chr17 55183317 55183317 1 + G A rs72843434 55183316 + 55183296 55183336 41 CTCCAGCAAATCAGCTGAGGTGTGTAAGCAAGATTCCCCCT CTCCAGCAAATCAGCTGAGGTATGTAAGCAAGATTCCCCCT < 41bp 0.55219316400135 0.892273131952012 0.26052022 0.39092708 prediction 0.680159935901324 Functional Gain - AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183316 chr17:55183317 synonymous SNV . 0 22 hPsi_associated_SNPs_24130 0 0 1 2 0 Endoplasmic reticulum 0.438718591832692 0.438718593171107 0 0 hPsi_site_17854 iPseU_CNN:0;iRNA_PseU:0 17855 chr5 151183593 151183593 1 + G A LUAD 151183592 + 151183572 151183612 41 GGAATGAGAGGCCCTCCCCGTGGAGGCATGGTGCAGAAACC GGAATGAGAGGCCCTCCCCGTAGAGGCATGGTGCAGAAACC < 41bp 0.548079510584264 0.888155764274413 0.20369282 0.42712045 prediction 0.680152507380297 Functional Gain - G3BP1 ENSG00000145907 CDS Human protein_coding chr5:151183592 chr5:151183593 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24131 0 0 1 0 0 Cytosol 0.438721335522187 0.43871859298604 0 0 hPsi_site_17855 iPseU_CNN:0;iRNA_PseU:0 17856 chr12 55945068 55945068 1 + G A LUSC 55945067 + 55945047 55945087 41 CTGGGCCTTACAAATCAACCTGAACTCCAAGTGATGATATT CTGGGCCTTACAAATCAACCTAAACTCCAAGTGATGATATT < 41bp 0.482064830365414 0.840074434679218 0.25166738 0.466051 prediction 0.680148869358436 Functional Gain - OR6C4 ENSG00000179626 CDS Human protein_coding chr12:55945067 chr12:55945068 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_24132 0 0 0 0 0 unknown 0.437912063238944 0.43872038827202 0 0 hPsi_site_17856 iPseU_CNN:0;iRNA_PseU:0 17857 chr10 47087158 47087158 1 + G A SKCM 47087157 + 47087137 47087177 41 CTTCATCCAGTGCATGTCGGTGACGGTCTCCATCCTCTCGC CTTCATCCAGTGCATGTCGGTAACGGTCTCCATCCTCTCGC < 41bp 0.557611210623455 0.89767780503552 0.39048165 0.8482031 prediction 0.68013318882413 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087157 chr10:47087158 synonymous SNV . 0 22 hPsi_associated_SNPs_24133 0 0 0 0 0 unknown 0.438718028452122 0.43871718821546 0.6964062 0 hPsi_site_17857 iPseU_CNN:0.6964062;iRNA_PseU:0 17858 chr10 124922483 124922483 1 + G A rs552637983 124922482 + 124922462 124922502 41 GGTTGGAGTTGATGTTATCATGTTCTCCCAAGCTTTCAATA GGTTGGAGTTGATGTTATCATATTCTCCCAAGCTTTCAATA < 41bp 0.51611076925121 0.856174329403509 0.27503794 0.33535326 prediction 0.680127120304598 Functional Gain - BUB3 ENSG00000154473 intronic Human protein_coding chr10:124922482 chr10:124922483 . . 0 22 hPsi_associated_SNPs_24134 0 0 1 0 0 Ribosome 0.438714800555588 0.438717771147301 0 0 hPsi_site_17858 iPseU_CNN:0;iRNA_PseU:0 17859 chr2 190531602 190531602 1 + G A PAAD 190531601 + 190531581 190531621 41 TGTTCCTTTAAATATGATGTTGCCACAAGCTGCATTGGAGA TGTTCCTTTAAATATGATGTTACCACAAGCTGCATTGGAGA < 41bp 0.450816510529842 0.84005514213037 0.25247076 0.48894712 prediction 0.68011028426074 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531601 chr2:190531602 synonymous SNV . 0 22 hPsi_associated_SNPs_24135 0 0 1 0 0 chromatin 0.438606527332483 0.438708259479072 0 0 hPsi_site_17859 iPseU_CNN:0;iRNA_PseU:0 17860 chr19 8322837 8322837 1 + C A UCEC 8322836 + 8322816 8322856 41 CCTCATCTTCTCCTTTGTCTTCTTCTACACCCGACTGGTCC CCTCATCTTCTCCTTTGTCTTATTCTACACCCGACTGGTCC < 41bp 0.512754127959229 0.852809250321003 0.3619726 0.7094523 prediction 0.680110244723548 Functional Gain - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8322836 chr19:8322837 nonsynonymous SNV 0.820 4 22 hPsi_associated_SNPs_24136 0 0 1 0 2 chromatin 0.438719567078818 0.438718419675069 0.4189046 0 hPsi_site_17860 iPseU_CNN:0.4189046;iRNA_PseU:0 17861 chr12 4768275 4768275 1 + G A BLCA 4768274 + 4768254 4768294 41 CTGTCCAAGGAAGCTGGAGTTGAAAAATTCATTCATGTTTC CTGTCCAAGGAAGCTGGAGTTAAAAAATTCATTCATGTTTC < 41bp 0.55129606635502 0.89135053308519 0.36651868 0.61353695 prediction 0.680108933460342 Functional Gain - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4768274 chr12:4768275 nonsynonymous SNV 0.944 1 22 hPsi_associated_SNPs_24137 0 0 1 0 2 Ribosome 0.438690314201159 0.438718466046312 0.2270739 0 hPsi_site_17861 iPseU_CNN:0.2270739;iRNA_PseU:0 17862 chr22 39421174 39421174 1 + G A UCEC 39421173 + 39421153 39421193 41 CGCTTCCAGATCACCTGGTTTGTATCATGGAACCCCTGCCT CGCTTCCAGATCACCTGGTTTATATCATGGAACCCCTGCCT < 41bp 0.429644240421134 0.84005200728475 0.60351455 0.86678433 prediction 0.680104014569499 Functional Gain - APOBEC3D ENSG00000243811 CDS Human protein_coding chr22:39421173 chr22:39421174 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_24138 0 0 0 0 1 Nucleus 0.438716879471298 0.438485066424683 0.52653956 0 hPsi_site_17862 iPseU_CNN:0.52653956;iRNA_PseU:0 17863 chr19 50148372 50148372 1 + C A COAD 50148371 + 50148351 50148391 41 CAGACAGAGACCCCACGCTTTCTCCTTCTGCCTTTATCCTG CAGACAGAGACCCCACGCTTTATCCTTCTGCCTTTATCCTG < 41bp 0.492153670676984 0.840049066004036 0.32797813 0.45726162 prediction 0.680098132008072 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50148371 chr19:50148372 nonsynonymous SNV 0.980 2 22 hPsi_associated_SNPs_24139 0 0 1 0 2 Cytosol 0.438718412635596 0.438717977391012 0 0 hPsi_site_17863 iPseU_CNN:0;iRNA_PseU:0 17864 chr17 7578453 7578453 1 + G A SKCM 7578452 + 7578432 7578472 41 TGACTGCTTGTAGATGGCCATGGCGCGGACGCGGGTGCCGG TGACTGCTTGTAGATGGCCATAGCGCGGACGCGGGTGCCGG < 41bp 0.518141583030187 0.858190308740945 0.21298137 0.30830106 prediction 0.680097451421516 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578452 chr17:7578453 synonymous SNV . 0 22 hPsi_associated_SNPs_24140 1 0 0 0 0 Ribosome 0.438718422989625 0.438707626448538 0 0 hPsi_site_17864 iPseU_CNN:0;iRNA_PseU:0 17865 chr21 43838581 43838581 1 + C A rs371391343 43838580 + 43838560 43838600 41 GCTAAGTCCTGGTGACTACATCTTTGTGGACCCCACGCAGC GCTAAGTCCTGGTGACTACATATTTGTGGACCCCACGCAGC < 41bp 0.525183660457763 0.865229541071096 0.29652423 0.34195164 prediction 0.680091761226667 Functional Gain - UBASH3A ENSG00000160185 CDS Human protein_coding chr21:43838580 chr21:43838581 synonymous SNV . 0 22 hPsi_associated_SNPs_24141 0 0 0 0 1 exosome 0.438718593004395 0.438718592992494 0 0 hPsi_site_17865 iPseU_CNN:0;iRNA_PseU:0 17866 chr14 21250133 21250133 1 + G A LUAD 21250132 + 21250112 21250152 41 GCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCT GCAAAAATCGTCGGCACAACTACCACCAGAGCTCAAAGCCT < 41bp 0.449895498818955 0.840037537850299 0.18931437 0.31767833 prediction 0.680075075700599 Functional Gain - RNASE6 ENSG00000169413 CDS Human protein_coding chr14:21250132 chr14:21250133 nonsynonymous SNV 0.935 4 22 hPsi_associated_SNPs_24142 0 0 0 0 0 Endoplasmic reticulum 0.438718903430289 0.43871872815028 0 0 hPsi_site_17866 iPseU_CNN:0;iRNA_PseU:0 17867 chr19 51273921 51273921 1 + G A HNSC 51273920 + 51273900 51273940 41 CAACCTGGGGTCCTGACACGTGATCGCTCTTGTTCCAGGAA CAACCTGGGGTCCTGACACGTAATCGCTCTTGTTCCAGGAA < 41bp 0.461885213052642 0.840036493158694 0.17087948 0.3259685 prediction 0.680072986317389 Functional Gain - GPR32 ENSG00000142511 CDS Human protein_coding chr19:51273920 chr19:51273921 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24143 0 0 0 0 0 unknown 0.438718643000263 0.438787952195295 0 0 hPsi_site_17867 iPseU_CNN:0;iRNA_PseU:0 17868 chr7 150164090 150164090 1 + G A UCEC 150164089 + 150164069 150164109 41 CATGCTCTGCTCTTGGTAATTGCCATCGGCCATTTCACAAG CATGCTCTGCTCTTGGTAATTACCATCGGCCATTTCACAAG < 41bp 0.43365856083682 0.840028454705134 0.19617769 0.35720003 prediction 0.680056909410267 Functional Gain - GIMAP8 ENSG00000171115 CDS Human protein_coding chr7:150164089 chr7:150164090 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24144 0 0 0 0 0 cytosol 0.438718527932151 0.438712145573601 0 0 hPsi_site_17868 iPseU_CNN:0;iRNA_PseU:0 17869 chr11 3430124 3430124 1 + C A LUAD 3430123 + 3430103 3430143 41 TCTCAGAGTCTCAGGGCAAATCCTTTCGAGCAGCGCCTCCC TCTCAGAGTCTCAGGGCAAATACTTTCGAGCAGCGCCTCCC < 41bp 0.508319407753352 0.84834601137897 0.1407221 0.32387495 prediction 0.680053207251237 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3430123 chr11:3430124 . . 0 22 hPsi_associated_SNPs_24145 0 0 0 0 0 unknown 0.438718587856571 0.438718305898663 0 0 hPsi_site_17869 iPseU_CNN:0;iRNA_PseU:0 17870 chr5 140516585 140516585 1 + G A LUSC 140516584 + 140516564 140516604 41 GTCGCTGGACTACGAGGCCCTGCAGGCGTTCGAGTTCCGCG GTCGCTGGACTACGAGGCCCTACAGGCGTTCGAGTTCCGCG < 41bp 0.445602583400661 0.840024885158504 0.28115666 0.43393013 prediction 0.680049770317007 Functional Gain - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140516584 chr5:140516585 synonymous SNV . 0 22 hPsi_associated_SNPs_24146 0 0 0 0 0 Endoplasmic reticulum 0.438682153391152 0.438796464444126 0 0 hPsi_site_17870 iPseU_CNN:0;iRNA_PseU:0 17871 chr12 41966845 41966845 1 + C A HNSC 41966844 + 41966824 41966864 41 CTCCGCTCACTGTAGACCGTTCCCCTGACAGTTCCCTTCCA CTCCGCTCACTGTAGACCGTTACCCTGACAGTTCCCTTCCA < 41bp 0.510594559127337 0.850617367344464 0.24234751 0.7370934 prediction 0.680045616434255 Functional Gain - PDZRN4 ENSG00000165966 CDS Human protein_coding chr12:41966844 chr12:41966845 nonsynonymous SNV 0.910 4 22 hPsi_associated_SNPs_24147 0 0 0 0 0 exosome 0.438747239065147 0.438711340294146 0.4741868 0 hPsi_site_17871 iPseU_CNN:0.4741868;iRNA_PseU:0 17872 chr1 40751668 40751668 1 + G A UCEC 40751667 + 40751647 40751687 41 TGAACTGGGGCACTGGAAGTTGGGACATACAGTCAAAAATA TGAACTGGGGCACTGGAAGTTAGGACATACAGTCAAAAATA < 41bp 0.544095414713379 0.884115436212132 0.29542702 0.68015033 prediction 0.680040042997506 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40751667 chr1:40751668 synonymous SNV . 0 22 hPsi_associated_SNPs_24148 0 0 1 0 2 Endoplasmic reticulum 0.438718592943362 0.438710367942918 0.36030066 0 hPsi_site_17872 iPseU_CNN:0.36030066;iRNA_PseU:0 17873 chr1 53546508 53546508 1 + G A UCEC 53546507 + 53546487 53546527 41 ATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAA ATTAGTGCGGTGCCCGCCAATACCTTCGACTCCACGCCCAA < 41bp 0.554877037202462 0.894895257735007 0.21715844 0.3720079 prediction 0.680036441065091 Functional Gain - PODN ENSG00000174348 CDS Human protein_coding chr1:53546507 chr1:53546508 nonsynonymous SNV 0.846 3 22 hPsi_associated_SNPs_24149 0 0 0 0 1 Cytosol 0.43871859291937 0.438718593808529 0 0 hPsi_site_17873 iPseU_CNN:0;iRNA_PseU:0 17874 chr4 96761499 96761499 1 + G A COAD 96761498 + 96761478 96761518 41 GCTTAAATACTACAGGATGATGCTGACTGTTCGCCGCATGG GCTTAAATACTACAGGATGATACTGACTGTTCGCCGCATGG < 41bp 0.534040428193715 0.874057607771878 0.2584402 0.56750214 prediction 0.680034359156326 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761498 chr4:96761499 nonsynonymous SNV 0.427 3 22 hPsi_associated_SNPs_24150 0 0 0 0 0 unknown 0.438718592447665 0.438718593392978 0.13500428 0 hPsi_site_17874 iPseU_CNN:0.13500428;iRNA_PseU:0 17875 chr11 63963226 63963226 1 + C A OV 63963225 + 63963205 63963245 41 ACACCTCCACCACCACCCCCTCCCAAAAAGGAGACCAAGCC ACACCTCCACCACCACCCCCTACCAAAAAGGAGACCAAGCC < 41bp 0.46702029713846 0.840009096850326 0.28176108 0.6469 prediction 0.680018193700652 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63963225 chr11:63963226 nonsynonymous SNV 0.942 1 22 hPsi_associated_SNPs_24151 0 0 1 0 1 Ribosome 0.438717391805461 0.438718593015187 0.2938 0 hPsi_site_17875 iPseU_CNN:0.2938;iRNA_PseU:0 17876 chr16 56921879 56921879 1 + G A rs138977195 56921878 + 56921858 56921898 41 AAGCCCAACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCA AAGCCCAACATTCTGGTGGTTAGGTTCAAGAAGAACTGGCA < 41bp 0.421113052728292 0.840004048246386 0.34171212 0.66987926 prediction 0.680008096492771 Functional Gain - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56921878 chr16:56921879 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_24152 2 0 0 0 2 nucleus 0.438718238001303 0.438715691000106 0.33975852 0 hPsi_site_17876 iPseU_CNN:0.33975852;iRNA_PseU:0 17877 chr4 71396794 71396794 1 + C A LUAD 71396793 + 71396773 71396813 41 CCTCATCATCCATTCCTTGTTCCCGGGAGGCATCCTGCCCA CCTCATCATCCATTCCTTGTTACCGGGAGGCATCCTGCCCA < 41bp 0.512833854863344 0.852831835533938 0.26712495 0.3577032 prediction 0.679995961341189 Functional Gain - AMTN ENSG00000187689 CDS Human protein_coding chr4:71396793 chr4:71396794 nonsynonymous SNV 0.078 0 22 hPsi_associated_SNPs_24153 0 0 0 0 1 unknown 0.438466304395719 0.438695146312703 0 0 hPsi_site_17877 iPseU_CNN:0;iRNA_PseU:0 17878 chr11 55944192 55944192 1 + G A SKCM 55944191 + 55944171 55944211 41 GCTTTTTGTGGTGTTCCTGGTGATTTACGCCATTACCTTGT GCTTTTTGTGGTGTTCCTGGTAATTTACGCCATTACCTTGT < 41bp 0.528221814238681 0.868207560643556 0.29853058 0.7145832 prediction 0.679971492809752 Functional Gain - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944191 chr11:55944192 synonymous SNV . 0 22 hPsi_associated_SNPs_24154 0 0 0 0 0 unknown 0.438718608619827 0.43871644288612 0.4291664 0 hPsi_site_17878 iPseU_CNN:0.4291664;iRNA_PseU:0 17879 chr20 39976260 39976260 1 + C A UCEC 39976259 + 39976239 39976279 41 TGGGGACAGCGGGGAGGCCTTCTTTGTTCAGGAGCTGGAGA TGGGGACAGCGGGGAGGCCTTATTTGTTCAGGAGCTGGAGA < 41bp 0.475364495385065 0.839983756261224 0.2559504 0.27275634 prediction 0.679967512522449 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39976259 chr20:39976260 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_24155 0 0 1 0 2 Nucleus 0.438734817001659 0.438699286421594 0 0 hPsi_site_17879 iPseU_CNN:0;iRNA_PseU:0 17880 chrX 47444680 47444680 1 + G A COAD 47444679 + 47444659 47444699 41 CCCCCGCCATGGAGAGTGTCTGCGGATACTTCCACAGGTCC CCCCCGCCATGGAGAGTGTCTACGGATACTTCCACAGGTCC < 41bp 0.439824466109667 0.839983037111093 0.2387279 0.6576209 prediction 0.679966074222185 Functional Gain - TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47444679 chrX:47444680 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_24156 0 0 1 0 2 Ribosome 0.438718591674685 0.438718602490419 0.3152418 0 hPsi_site_17880 iPseU_CNN:0.3152418;iRNA_PseU:0 17881 chr1 28059159 28059159 1 + G A rs146195844 28059158 + 28059138 28059178 41 ATGTGCTCAGAACGTGCAGTTGTATGGAACGGTAAGTAGGA ATGTGCTCAGAACGTGCAGTTATATGGAACGGTAAGTAGGA < 41bp 0.447841755051427 0.839981399879625 0.23402154 0.63260514 prediction 0.679962799759249 Functional Gain - FAM76A ENSG00000009780 CDS Human protein_coding chr1:28059158 chr1:28059159 synonymous SNV . 0 22 hPsi_associated_SNPs_24157 0 0 0 0 2 chromatin 0.43866122817799 0.438598533862969 0.26521028 0 hPsi_site_17881 iPseU_CNN:0.26521028;iRNA_PseU:0 17882 chrX 153533696 153533696 1 + G A STAD 153533695 + 153533675 153533715 41 AGTTCTTCTGAGATCATGTCTGTGCTGTTCTTCTACATCAT AGTTCTTCTGAGATCATGTCTATGCTGTTCTTCTACATCAT < 41bp 0.432507167634668 0.839975501698241 0.24058652 0.24910203 prediction 0.679951003396483 Functional Gain - TKTL1 ENSG00000007350 CDS Human protein_coding chrX:153533695 chrX:153533696 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_24158 0 0 0 0 3 exosome 0.438852904569697 0.438902545832155 0 0 hPsi_site_17882 iPseU_CNN:0;iRNA_PseU:0 17883 chr3 151599220 151599220 1 + C A COAD 151599219 + 151599199 151599239 41 ATCAACCCTGTCTTCTATTTTCTTTTGGGAGATCACTTCAG ATCAACCCTGTCTTCTATTTTATTTTGGGAGATCACTTCAG < 41bp 0.505429584028043 0.845400014357106 0.31811708 0.28240466 prediction 0.679940860658128 Functional Gain - SUCNR1 ENSG00000198829 CDS Human protein_coding chr3:151599219 chr3:151599220 nonsynonymous SNV 0.451 3 22 hPsi_associated_SNPs_24159 0 0 0 0 0 exosome 0.438718519615911 0.438718578684869 0 0 hPsi_site_17883 iPseU_CNN:0;iRNA_PseU:0 17884 chr11 76814037 76814037 1 + C A PAAD 76814036 + 76814016 76814056 41 AGCTGCTGCAGCCAGCGGAGTCTGTGTACCGCCTCAACTTC AGCTGCTGCAGCCAGCGGAGTATGTGTACCGCCTCAACTTC < 41bp 0.494553742948479 0.839963791280075 0.29963443 0.6099041 prediction 0.679927582560149 Functional Gain - OMP ENSG00000254550 CDS Human protein_coding chr11:76814036 chr11:76814037 nonsynonymous SNV 0.605 0 22 hPsi_associated_SNPs_24160 0 0 0 0 0 exosome 0.438675777107112 0.438970273177393 0.2198082 0 hPsi_site_17884 iPseU_CNN:0.2198082;iRNA_PseU:0 17885 chr1 248344193 248344193 1 + G A SKCM 248344192 + 248344172 248344212 41 GGAGGTGACTAGAGCATTCATGAAGATCTTAGGAAAGGGCA GGAGGTGACTAGAGCATTCATAAAGATCTTAGGAAAGGGCA < 41bp 0.519397090481933 0.859358226165508 0.23754314 0.30357462 prediction 0.67992227136715 Functional Gain - OR2M2 ENSG00000198601 CDS Human protein_coding chr1:248344192 chr1:248344193 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_24161 0 0 0 0 0 exosome 0.438718292277309 0.43871859222589 0 0 hPsi_site_17885 iPseU_CNN:0;iRNA_PseU:0 17886 chr17 72791173 72791173 1 + C A GBM 72791172 + 72791152 72791192 41 GGGGGTCAACTTGTTCTATTTCTGCATCATCGTTTACCTGT GGGGGTCAACTTGTTCTATTTATGCATCATCGTTTACCTGT < 41bp 0.519497831017195 0.859457451797979 0.2774449 0.3437733 prediction 0.679919241561568 Functional Gain - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72791172 chr17:72791173 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24162 0 0 1 0 2 Endoplasmic reticulum 0.438678612963297 0.439189347773732 0 0 hPsi_site_17886 iPseU_CNN:0;iRNA_PseU:0 17887 chr17 40841601 40841601 1 + G A UCEC 40841600 + 40841580 40841620 41 AGTCTTGGGATGACTTCATTTGCTACTGCGAACTGACGGGC AGTCTTGGGATGACTTCATTTACTACTGCGAACTGACGGGC < 41bp 0.427752274932327 0.839959371063599 0.15382376 0.33208326 prediction 0.679918742127198 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40841600 chr17:40841601 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_24163 0 0 1 0 2 Cytosol 0.438652234803363 0.43834791832337 0 0 hPsi_site_17887 iPseU_CNN:0;iRNA_PseU:0 17888 chr12 58002372 58002372 1 + G A BRCA 58002371 + 58002351 58002391 41 GCCTACCTCCCGGACTGCCCTGAGGGCAACAAGGTGCTGAC GCCTACCTCCCGGACTGCCCTAAGGGCAACAAGGTGCTGAC < 41bp 0.438176867695388 0.839955984569089 0.21365994 0.27999935 prediction 0.679911969138178 Functional Gain - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002371 chr12:58002372 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24164 0 0 1 0 1 exosome 0.438718591320082 0.43871835979142 0 0 hPsi_site_17888 iPseU_CNN:0;iRNA_PseU:0 17889 chr20 32848288 32848288 1 + G A LUAD 32848287 + 32848267 32848307 41 GCTCCGAGATGACAGGAGCCTGAGAAGCAACTCCTCTGTGA GCTCCGAGATGACAGGAGCCTAAGAAGCAACTCCTCTGTGA < 41bp 0.549548941551579 0.889503988792334 0.3363448 0.69438344 prediction 0.67991009448151 Functional Gain - ASIP ENSG00000101440 CDS Human protein_coding chr20:32848287 chr20:32848288 synonymous SNV . 0 22 hPsi_associated_SNPs_24165 0 0 0 0 1 chromatin 0.438720531169211 0.438718586727146 0.38876688 0 hPsi_site_17889 iPseU_CNN:0.38876688;iRNA_PseU:0 17890 chr14 74009816 74009816 1 + G A SKCM 74009815 + 74009795 74009835 41 GGGTGAGCTCTGCCTTTCCATGGCCTCTTTCCTGAAGGGCA GGGTGAGCTCTGCCTTTCCATAGCCTCTTTCCTGAAGGGCA < 41bp 0.446722026790446 0.839954297697811 0.32033437 0.6658965 prediction 0.679908595395623 Functional Gain - ACOT1 ENSG00000184227 CDS Human protein_coding chr14:74009815 chr14:74009816 nonsynonymous SNV 0.909 3 22 hPsi_associated_SNPs_24166 0 0 0 0 1 nucleus 0.438718592995101 0.438718466486338 0.331793 0 hPsi_site_17890 iPseU_CNN:0.331793;iRNA_PseU:0 17891 chr12 8290794 8290794 1 + C A BLCA 8290793 + 8290773 8290813 41 CGCTGCGTTGTGCTAAATTTTCGTAAATCACCCAAAAGATG CGCTGCGTTGTGCTAAATTTTAGTAAATCACCCAAAAGATG < 41bp 0.499800588668569 0.839944708022555 0.27377576 0.6290548 prediction 0.679889416045111 Functional Gain - CLEC4A ENSG00000111729 CDS Human protein_coding chr12:8290793 chr12:8290794 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24167 0 0 0 0 1 exosome 0.438718034647908 0.438760491265482 0.2581096 0 hPsi_site_17891 iPseU_CNN:0.2581096;iRNA_PseU:0 17892 chr20 56138710 56138710 1 + G A SKCM 56138709 + 56138689 56138729 41 GAAGACCAACCTGGCCATGATGAACCCCAGCCTCCCCGGGT GAAGACCAACCTGGCCATGATAAACCCCAGCCTCCCCGGGT < 41bp 0.557704472828171 0.897648934284455 0.31768382 0.6588273 prediction 0.679888922912569 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56138709 chr20:56138710 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24168 0 0 1 0 2 exosome 0.438718592994856 0.438718592822415 0.3176546 0 hPsi_site_17892 iPseU_CNN:0.3176546;iRNA_PseU:0 17893 chr16 31049870 31049870 1 + G A HNSC 31049869 + 31049849 31049889 41 GTGACTCGACAGGCCTTAAATGAGATCTCGGCCCGGCACAG GTGACTCGACAGGCCTTAAATAAGATCTCGGCCCGGCACAG < 41bp 0.558274336848245 0.898218133727055 0.2974233 0.35637587 prediction 0.679887593757619 Functional Gain - STX4 ENSG00000103496 CDS Human protein_coding chr16:31049869 chr16:31049870 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24169 0 0 1 0 2 Ribosome 0.438718591370687 0.438718593016902 0 0 hPsi_site_17893 iPseU_CNN:0;iRNA_PseU:0 17894 chr2 136467701 136467701 1 + G A STAD 136467700 + 136467680 136467720 41 TACCAAACAATCCACAATCTTGTGCCCACTCACCCCCGCAG TACCAAACAATCCACAATCTTATGCCCACTCACCCCCGCAG < 41bp 0.441070481982296 0.839938903118644 0.2888937 0.61522806 prediction 0.679877806237289 Functional Gain - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136467700 chr2:136467701 nonsynonymous SNV 0.938 0 22 hPsi_associated_SNPs_24170 0 0 1 0 1 Cytosol 0.438718475647633 0.438718584975352 0.23045612 0 hPsi_site_17894 iPseU_CNN:0.23045612;iRNA_PseU:0 17895 chr14 96707297 96707297 1 + G A LIHC 96707296 + 96707276 96707316 41 AGGGCCACAACGTCACCGCTTGTGTCATCAGCTACCCATCC AGGGCCACAACGTCACCGCTTATGTCATCAGCTACCCATCC < 41bp 0.535154828603231 0.875092591251737 0.5003126 0.5374034 prediction 0.679875525297013 Functional Gain - BDKRB2 ENSG00000168398 CDS Human protein_coding chr14:96707296 chr14:96707297 nonsynonymous SNV 0.420 4 22 hPsi_associated_SNPs_24171 0 0 0 0 0 exosome 0.437957791947897 0.439089527815776 0.0741816 0 hPsi_site_17895 iPseU_CNN:0.0741816;iRNA_PseU:0 17896 chr3 57291402 57291402 1 + C A COAD 57291401 + 57291381 57291421 41 CAATACAGTTTGACATAATTTCTCCTGTGTGTGAAGATCAG CAATACAGTTTGACATAATTTATCCTGTGTGTGAAGATCAG < 41bp 0.511925762192104 0.851862890716797 0.23515067 0.2429145 prediction 0.679874257049385 Functional Gain - APPL1 ENSG00000157500 CDS Human protein_coding chr3:57291401 chr3:57291402 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_24172 0 0 1 0 1 Cytosol 0.438781450403519 0.438698379411693 0 0 hPsi_site_17896 iPseU_CNN:0;iRNA_PseU:0 17897 chr17 7324267 7324267 1 + C A KIRP 7324266 + 7324246 7324286 41 GAAGCAGAGTTCTCCTGCAGTCCATCTTCGGTGCACCATGG GAAGCAGAGTTCTCCTGCAGTACATCTTCGGTGCACCATGG < 41bp 0.505421184188644 0.845355901895388 0.3074844 0.4175762 prediction 0.679869435413488 Functional Gain - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324266 chr17:7324267 synonymous SNV . 0 22 hPsi_associated_SNPs_24173 0 0 0 0 1 exosome 0.438741233863172 0.438718726870069 0 0 hPsi_site_17897 iPseU_CNN:0;iRNA_PseU:0 17898 chr20 37255663 37255663 1 + G A LIHC 37255662 + 37255642 37255682 41 GGAAGCTGAATCCCAGTGGCTGCAGGACACAGGCCTGTCGG GGAAGCTGAATCCCAGTGGCTACAGGACACAGGCCTGTCGG < 41bp 0.456109687093107 0.839933878579551 0.32511765 0.6772848 prediction 0.679867757159102 Functional Gain - ARHGAP40 ENSG00000124143 CDS Human protein_coding chr20:37255662 chr20:37255663 synonymous SNV . 0 22 hPsi_associated_SNPs_24174 0 0 0 0 1 cytosol 0.438717942223444 0.438718462541596 0.3545696 0 hPsi_site_17898 iPseU_CNN:0.3545696;iRNA_PseU:0 17899 chr9 125154785 125154785 1 + G A LUSC 125154784 + 125154764 125154804 41 GTGCCGGATGCCAGTCAGGATGATGGGCCTGCTGTGGAGCG GTGCCGGATGCCAGTCAGGATAATGGGCCTGCTGTGGAGCG < 41bp 0.444794042920972 0.83993018325323 0.25898218 0.45041445 prediction 0.679860366506461 Functional Gain - PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154784 chr9:125154785 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24175 0 0 1 0 0 nucleolus 0.438719104113861 0.438718590170368 0 0 hPsi_site_17899 iPseU_CNN:0;iRNA_PseU:0 17900 chr11 46726766 46726766 1 + C A SKCM 46726765 + 46726745 46726785 41 CCGCACTGTGGCCGGGCGTTTCGTCAGCGGGGCAACCTGCG CCGCACTGTGGCCGGGCGTTTAGTCAGCGGGGCAACCTGCG < 41bp 0.511847878013088 0.851777908471067 0.22466531 0.5801205 prediction 0.679860060915959 Functional Gain - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726765 chr11:46726766 nonsynonymous SNV 0.967 3 22 hPsi_associated_SNPs_24176 0 0 1 0 0 cytosol 0.438717405056227 0.438722674640037 0.160241 0 hPsi_site_17900 iPseU_CNN:0.160241;iRNA_PseU:0 17901 chr17 28378183 28378183 1 + C A GBM 28378182 + 28378162 28378202 41 ATTGGCCCTGCTGGAATTGTTCTATGACCATAGTTCACAAA ATTGGCCCTGCTGGAATTGTTATATGACCATAGTTCACAAA < 41bp 0.512710679145668 0.852638232233593 0.48856556 0.40992564 prediction 0.67985510617585 Functional Gain - EFCAB5 ENSG00000176927 CDS Human protein_coding chr17:28378182 chr17:28378183 nonsynonymous SNV 0.938 3 22 hPsi_associated_SNPs_24177 0 0 0 2 2 exosome 0.438718676196207 0.438718593622507 0 0 hPsi_site_17901 iPseU_CNN:0;iRNA_PseU:0 17902 chr20 33513521 33513521 1 + G A SKCM 33513520 + 33513500 33513540 41 GGCTGCCAGCGGGACCAGGATGGCTATTACTGGATCACTGG GGCTGCCAGCGGGACCAGGATAGCTATTACTGGATCACTGG < 41bp 0.431304489520513 0.839923564932941 0.25057435 0.5372157 prediction 0.679847129865881 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33513520 chr20:33513521 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24178 0 0 1 2 2 Ribosome 0.438718592995102 0.438718598631867 0.0744313999999999 0 hPsi_site_17902 iPseU_CNN:0.0744313999999999;iRNA_PseU:0 17903 chr1 1398032 1398032 1 + C A rs181068440 1398031 + 1398011 1398051 41 AGGAAGTGCTTAGAGATCGCTCGGCTGACAGAGGGCATGTC AGGAAGTGCTTAGAGATCGCTAGGCTGACAGAGGGCATGTC < 41bp 0.480217609239173 0.839922252684047 0.27802777 0.717489 prediction 0.679844505368094 Functional Gain - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1398031 chr1:1398032 synonymous SNV . 0 22 hPsi_associated_SNPs_24179 0 0 0 0 2 Nucleus 0.438718769369403 0.438713990861143 0.434978 0 hPsi_site_17903 iPseU_CNN:0.434978;iRNA_PseU:0 17904 chr17 45682836 45682836 1 + C A UCEC 45682835 + 45682815 45682855 41 TCTCTTGTCCCACACAGACTTCTATGAGGAAATCCAGGAGT TCTCTTGTCCCACACAGACTTATATGAGGAAATCCAGGAGT < 41bp 0.486723862171566 0.839918875163122 0.4955481 0.46108365 prediction 0.679837750326244 Functional Gain - NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45682835 chr17:45682836 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24180 0 0 1 0 1 Nucleus 0.438733285279041 0.438685186089904 0 0 hPsi_site_17904 iPseU_CNN:0;iRNA_PseU:0 17905 chr19 1055135 1055135 1 + C A UCEC 1055134 + 1055114 1055154 41 TCCTGCTGAAGTGGCCAAGGTCTTGGCCAGTGGCAACTGGA TCCTGCTGAAGTGGCCAAGGTATTGGCCAGTGGCAACTGGA < 41bp 0.495881940260713 0.839918181496116 0.32853585 0.7181824 prediction 0.679836362992232 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1055134 chr19:1055135 synonymous SNV . 0 22 hPsi_associated_SNPs_24181 0 0 1 0 1 Endoplasmic reticulum 0.438687823898789 0.438781533285425 0.4363648 0 hPsi_site_17905 iPseU_CNN:0.4363648;iRNA_PseU:0 17906 chr1 97270412 97270412 1 + G A UCEC 97270411 + 97270391 97270431 41 AATGCTGCTGCAGCAGCTGCTGCAGCTGCTGCTGGCCGAGT AATGCTGCTGCAGCAGCTGCTACAGCTGCTGCTGGCCGAGT < 41bp 0.523941052270799 0.863855396169504 0.262325 0.31861365 prediction 0.67982868779741 Functional Gain - PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97270411 chr1:97270412 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24182 0 0 1 0 3 Cytosol 0.438722080083889 0.438697791268122 0 0 hPsi_site_17906 iPseU_CNN:0;iRNA_PseU:0 17907 chr19 50910273 50910273 1 + G A ESCA 50910272 + 50910252 50910292 41 CAGACCCGCCGCCGCCTGGCTGTGTACTGCCTGAAGGATGC CAGACCCGCCGCCGCCTGGCTATGTACTGCCTGAAGGATGC < 41bp 0.557419663951995 0.89733203099677 0.23271438 0.3101691 prediction 0.67982473408955 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50910272 chr19:50910273 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24183 0 0 1 0 1 Nucleus 0.438708052022034 0.438718893330961 0 0 hPsi_site_17907 iPseU_CNN:0;iRNA_PseU:0 17908 chr1 211449664 211449664 1 + C A UCEC 211449663 + 211449643 211449683 41 CCTTGCTGATCTCCCTAATTTCACTCCCTTTCCGGATGAGT CCTTGCTGATCTCCCTAATTTAACTCCCTTTCCGGATGAGT < 41bp 0.489826152801416 0.839911490183553 0.5386001 0.6646082 prediction 0.679822980367106 Functional Gain - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211449663 chr1:211449664 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_24184 0 0 1 0 2 Ribosome 0.438718592998349 0.43871859299567 0.2520162 0 hPsi_site_17908 iPseU_CNN:0.2520162;iRNA_PseU:0 Platelet count 17909 chr19 51645917 51645917 1 + C A ESCA 51645916 + 51645896 51645936 41 AACTCGGGACCGATTCCACCTCCTTGGGGACCCACAGACCA AACTCGGGACCGATTCCACCTACTTGGGGACCCACAGACCA < 41bp 0.473618139625476 0.83990461208584 0.23337951 0.79423755 prediction 0.67980922417168 Functional Gain - SIGLEC7 ENSG00000168995 CDS Human protein_coding chr19:51645916 chr19:51645917 synonymous SNV . 0 22 hPsi_associated_SNPs_24185 0 0 0 0 0 exosome 0.438718637470932 0.438685484397578 0.5884751 0 hPsi_site_17909 iPseU_CNN:0.5884751;iRNA_PseU:0 17910 chr1 246922401 246922401 1 + C A UCEC 246922400 + 246922380 246922420 41 CTTTTATGGGATCTGATGTGTCTGTTGTAAGGAGGACTCAA CTTTTATGGGATCTGATGTGTATGTTGTAAGGAGGACTCAA < 41bp 0.506173710641744 0.846077196326465 0.2609259 0.37456954 prediction 0.679806971369443 Functional Gain - SCCPDH ENSG00000143653 CDS Human protein_coding chr1:246922400 chr1:246922401 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_24186 0 0 1 0 2 Ribosome 0.438718450708629 0.438718172972892 0 0 hPsi_site_17910 iPseU_CNN:0;iRNA_PseU:0 17911 chr1 233802600 233802600 1 + C A SKCM 233802599 + 233802579 233802619 41 CCCGGCCGCTGTCTTCTCAGTCCTGGAGGATGACTGGAACT CCCGGCCGCTGTCTTCTCAGTACTGGAGGATGACTGGAACT < 41bp 0.486119105004265 0.839898827399901 0.17106795 0.59764755 prediction 0.679797654799803 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802599 chr1:233802600 synonymous SNV . 0 22 hPsi_associated_SNPs_24187 0 0 1 0 0 Endoplasmic reticulum 0.438718592844757 0.438716521997601 0.1952951 0 hPsi_site_17911 iPseU_CNN:0.1952951;iRNA_PseU:0 17912 chr7 37780436 37780436 1 + G A rs138213333 37780435 + 37780415 37780455 41 GACGCTGGTGATTGTCATTGTGGTACCCCTGGTTGTCTCCC GACGCTGGTGATTGTCATTGTAGTACCCCTGGTTGTCTCCC < 41bp 0.442912722993093 0.839896840711196 0.1953035 0.47721773 prediction 0.679793681422391 Functional Gain - GPR141 ENSG00000187037 CDS Human protein_coding chr7:37780435 chr7:37780436 synonymous SNV . 0 22 hPsi_associated_SNPs_24188 0 0 0 0 0 exosome 0.438719318021429 0.438740273990034 0 0 hPsi_site_17912 iPseU_CNN:0;iRNA_PseU:0 17913 chr3 122598123 122598123 1 + C T BLCA 122598124 - 122598104 122598144 41 CGACCCGGGAAGGCACCAGTTGAACCAAGACAACTCTGTAA CGACCCGGGAAGGCACCAGTTAAACCAAGACAACTCTGTAA < 41bp 0.52929915090716 0.869191318644126 0.29054505 0.67691183 prediction 0.679784335473931 Functional Gain - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122598124 chr3:122598123 synonymous SNV . 0 22 hPsi_associated_SNPs_24189 0 0 0 0 0 Endoplasmic reticulum 0.438713988971779 0.438390583417862 0.35382366 0 hPsi_site_17913 iPseU_CNN:0.35382366;iRNA_PseU:0 17914 chr22 20127384 20127384 1 + G A CESC 20127383 + 20127363 20127403 41 GTCTACGTGCTGAACCACGCTGAGGGGCTGGGAGCCGCGCA GTCTACGTGCTGAACCACGCTAAGGGGCTGGGAGCCGCGCA < 41bp 0.435998682426466 0.839890725496388 0.27402717 0.35898092 prediction 0.679781450992777 Functional Gain - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20127383 chr22:20127384 nonsynonymous SNV 0.983 1 22 hPsi_associated_SNPs_24190 0 0 1 0 1 Endoplasmic reticulum 0.43873121392958 0.438718752388334 0 0 hPsi_site_17914 iPseU_CNN:0;iRNA_PseU:0 17915 chr14 22133327 22133327 1 + G A SKCM 22133326 + 22133306 22133346 41 CTAAACCAAACAAGAGTGACTGAATTTGTCTTCTTGGGACT CTAAACCAAACAAGAGTGACTAAATTTGTCTTCTTGGGACT < 41bp 0.512581465810423 0.852466582155663 0.22970065 0.24156812 prediction 0.67977023269048 Functional Gain - OR4E2 ENSG00000221977 CDS Human protein_coding chr14:22133326 chr14:22133327 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24191 0 0 0 0 0 unknown 0.438540788541911 0.438718306547787 0 0 hPsi_site_17915 iPseU_CNN:0;iRNA_PseU:0 17916 chr15 28900800 28900800 1 + C A UCEC 28900799 + 28900779 28900819 41 ACATCAACTCCCAGCTCCGCTCCATCACCCACAGCTTTGCG ACATCAACTCCCAGCTCCGCTACATCACCCACAGCTTTGCG < 41bp 0.49320593836041 0.839884457540224 0.30545533 0.5668394 prediction 0.679768915080449 Functional Gain - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28900799 chr15:28900800 . . 0 22 hPsi_associated_SNPs_24192 0 0 0 4 1 unknown 0.438720052599397 0.438995051607434 0.1336788 0 hPsi_site_17916 iPseU_CNN:0.1336788;iRNA_PseU:0 17917 chr17 5185621 5185621 1 + G A rs542995528 5185620 + 5185600 5185640 41 TCGGCGGTCGGGTCCGTCTCTGCCCGCGGCTGTGGCGGCGC TCGGCGGTCGGGTCCGTCTCTACCCGCGGCTGTGGCGGCGC < 41bp 0.52008426939689 0.859961790863203 0.27051792 0.3877484 prediction 0.679755042932626 Functional Gain - RABEP1 ENSG00000029725 UTR5 Human protein_coding chr17:5185620 chr17:5185621 . . 0 22 hPsi_associated_SNPs_24193 0 0 1 0 0 Ribosome 0.43875994913989 0.438572908262519 0 0 hPsi_site_17917 iPseU_CNN:0;iRNA_PseU:0 17918 chr20 3845354 3845354 1 + G A rs113132376 3845353 + 3845333 3845373 41 CTCAACCCGTGCTGGCATGGTGCCATCCAAAGTGCCTACTA CTCAACCCGTGCTGGCATGGTACCATCCAAAGTGCCTACTA < 41bp 0.544542734357032 0.884406173778354 0.38366434 0.79026246 prediction 0.679726878842644 Functional Gain - MAVS ENSG00000088888 CDS Human protein_coding chr20:3845353 chr20:3845354 synonymous SNV . 0 22 hPsi_associated_SNPs_24194 0 0 1 0 1 Nucleus 0.438661905120185 0.438397935284004 0.58052492 0 hPsi_site_17918 iPseU_CNN:0.58052492;iRNA_PseU:0 17919 chr5 36170507 36170507 1 + G A BLCA 36170506 + 36170486 36170526 41 TCTGGGTGTTCTGGATTCTCTGAATTTGCCCTGCAGACTTT TCTGGGTGTTCTGGATTCTCTAAATTTGCCCTGCAGACTTT < 41bp 0.449863546389874 0.839862830604707 0.3352455 0.3545279 prediction 0.679725661209414 Functional Gain - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36170506 chr5:36170507 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_24195 0 0 1 0 2 Cytosol 0.438718557808133 0.438718581930319 0 0 hPsi_site_17919 iPseU_CNN:0;iRNA_PseU:0 17920 chr6 50791434 50791434 1 + C A UCEC 50791433 + 50791413 50791453 41 TCGGGCCGCCTTGCCCCAGCTCTCGGGCCTTGACCCCCGGA TCGGGCCGCCTTGCCCCAGCTATCGGGCCTTGACCCCCGGA < 41bp 0.47914795638144 0.839859708976037 0.35545328 0.68318367 prediction 0.679719417952074 Functional Gain - TFAP2B ENSG00000008196 CDS Human protein_coding chr6:50791433 chr6:50791434 synonymous SNV . 0 22 hPsi_associated_SNPs_24196 0 0 0 0 0 Endoplasmic reticulum 0.438718437295908 0.438718348496864 0.36636734 0 hPsi_site_17920 iPseU_CNN:0.36636734;iRNA_PseU:0 17921 chr11 60637257 60637257 1 + C A UCEC 60637256 + 60637236 60637276 41 CACTGGACCCAGGGCACAGCTCTGTCCACCCAACCCCTGCT CACTGGACCCAGGGCACAGCTATGTCCACCCAACCCCTGCT < 41bp 0.520299900390138 0.860152013230866 0.24010712 0.33467746 prediction 0.679704225681456 Functional Gain - ZP1 ENSG00000149506 CDS Human protein_coding chr11:60637256 chr11:60637257 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_24197 0 0 0 0 0 exosome 0.438718592995095 0.438718592776386 0 0 hPsi_site_17921 iPseU_CNN:0;iRNA_PseU:0 17922 chrX 1752146 1752146 1 + C A STAD 1752145 + 1752125 1752165 41 GTGGACGGCAAAGCAGCACTTCTCATTCCAGGAGGAAGAAC GTGGACGGCAAAGCAGCACTTATCATTCCAGGAGGAAGAAC < 41bp 0.518731504832746 0.858580659052472 0.24814293 0.28524345 prediction 0.679698308439453 Functional Gain - ASMT ENSG00000196433 CDS Human protein_coding chrX:1752145 chrX:1752146 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_24198 0 0 0 0 1 exosome 0.438718592976444 0.438718592977536 0 0 hPsi_site_17922 iPseU_CNN:0;iRNA_PseU:0 17923 chr15 34649603 34649603 1 + C A LUAD 34649602 + 34649582 34649622 41 CCCAGGGAGAAACCCCTAGCTCTGGGAGTAGTTCGACCCTC CCCAGGGAGAAACCCCTAGCTATGGGAGTAGTTCGACCCTC < 41bp 0.505150465566247 0.844999596182714 0.324567 0.4204579 prediction 0.679698261232933 Functional Gain - NUTM1 ENSG00000184507 CDS Human protein_coding chr15:34649602 chr15:34649603 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_24199 0 0 0 0 0 exosome 0.438718592948084 0.438677552847729 0 0 hPsi_site_17923 iPseU_CNN:0;iRNA_PseU:0 17924 chr11 61503800 61503800 1 + C A LAML 61503799 + 61503779 61503819 41 TGGAGCAGGAGATGGTCCTGTCCCAGGCCTTTGGGCGAGAC TGGAGCAGGAGATGGTCCTGTACCAGGCCTTTGGGCGAGAC < 41bp 0.524932685315145 0.864781180289315 0.24499932 0.80482686 prediction 0.679696989948341 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61503799 chr11:61503800 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_24200 0 0 1 0 1 Endoplasmic reticulum 0.438718754804159 0.438718609192923 0.60965372 0 hPsi_site_17924 iPseU_CNN:0.60965372;iRNA_PseU:0 17925 chr19 843597 843597 1 + G A rs145358114 843596 + 843576 843616 41 CTTGATCCACCCCAGCTTCGTGCTGACGGCCGCGCACTGCC CTTGATCCACCCCAGCTTCGTACTGACGGCCGCGCACTGCC < 41bp 0.541616234849069 0.881460960664635 0.2416924 0.5165333 prediction 0.67968945163113 Functional Gain - PRTN3 ENSG00000196415 CDS Human protein_coding chr19:843596 chr19:843597 synonymous SNV . 0 22 hPsi_associated_SNPs_24201 0 0 0 0 1 exosome 0.438707013555055 0.438683128709049 0.0330665999999999 0 hPsi_site_17925 iPseU_CNN:0.0330665999999999;iRNA_PseU:0 17926 chr17 79202841 79202841 1 + C T rs78610767 79202842 - 79202822 79202862 41 CTGGTGGGGGCTGGGGCTGCTGCGGGAGAGTCCTGTCCTGA CTGGTGGGGGCTGGGGCTGCTACGGGAGAGTCCTGTCCTGA < 41bp 0.547079215259609 0.886920272003269 0.25364888 0.6014555 prediction 0.67968211348732 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79202842 chr17:79202841 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24202 0 0 0 0 0 chromatin 0.438718592995632 0.438718611806125 0.202911 0 hPsi_site_17926 iPseU_CNN:0.202911;iRNA_PseU:0 17927 chr5 135399373 135399373 1 + G A rs7854 135399372 + 135399352 135399392 41 TTGAAATGTTCTGTCAAATGTGTCTCACATCTACACGTGGC TTGAAATGTTCTGTCAAATGTATCTCACATCTACACGTGGC < 41bp 0.497443952181495 0.839837994302735 0.29401946 0.5822785 prediction 0.67967598860547 Functional Gain - TGFBI ENSG00000120708 UTR3 Human protein_coding chr5:135399372 chr5:135399373 . . 0 22 hPsi_associated_SNPs_24203 1 0 1 0 0 Endoplasmic reticulum 0.438620163851637 0.438558862065045 0.164557 0 hPsi_site_17927 iPseU_CNN:0.164557;iRNA_PseU:0 17928 chr20 37153514 37153514 1 + C A PAAD 37153513 + 37153493 37153533 41 TCTAAACTCTCCTCCTTTGTTCTGCTGTGACTTGAAAGGGA TCTAAACTCTCCTCCTTTGTTATGCTGTGACTTGAAAGGGA < 41bp 0.504795717823666 0.844633232175377 0.3192461 0.31942087 prediction 0.679675028703422 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37153513 chr20:37153514 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24204 0 0 1 10 1 Nucleus 0.439678923071192 0.438591628575447 0 0 hPsi_site_17928 iPseU_CNN:0;iRNA_PseU:0 17929 chr14 21499262 21499262 1 + G A HNSC 21499261 + 21499241 21499281 41 TTCAAAGGGAAGAGTCCAGATGAAGTCCTGGAGAACATTTA TTCAAAGGGAAGAGTCCAGATAAAGTCCTGGAGAACATTTA < 41bp 0.450726722966613 0.839836661584726 0.3061844 0.5226687 prediction 0.679673323169451 Functional Gain - TPPP2 ENSG00000179636 CDS Human protein_coding chr14:21499261 chr14:21499262 nonsynonymous SNV 0.071 4 22 hPsi_associated_SNPs_24205 0 0 0 0 2 exosome 0.438649209272344 0.438713087232334 0.0453374 0 hPsi_site_17929 iPseU_CNN:0.0453374;iRNA_PseU:0 17930 chr17 39411754 39411754 1 + G A ACC 39411753 + 39411733 39411773 41 CTGCCAGCCCTCCTGCTGTGTGTCTAGCTGCTGCCAGCCTT CTGCCAGCCCTCCTGCTGTGTATCTAGCTGCTGCCAGCCTT < 41bp 0.452849251968485 0.839835848455782 0.22807378 0.28146493 prediction 0.679671696911564 Functional Gain - KRTAP9-9 ENSG00000198083 CDS Human protein_coding chr17:39411753 chr17:39411754 synonymous SNV . 0 22 hPsi_associated_SNPs_24206 0 0 0 0 0 unknown 0.43871736112314 0.438718679560016 0 0 hPsi_site_17930 iPseU_CNN:0;iRNA_PseU:0 17931 chr4 39448806 39448806 1 + C A UCEC 39448805 + 39448785 39448825 41 GCTCAAGGGCACGGTCGACTTCTGCGCGCTCAACCACTTCA GCTCAAGGGCACGGTCGACTTATGCGCGCTCAACCACTTCA < 41bp 0.521160019479316 0.860994357955775 0.4781314 0.84256035 prediction 0.679668676952917 Functional Gain - KLB ENSG00000134962 CDS Human protein_coding chr4:39448805 chr4:39448806 nonsynonymous SNV 0.472 4 22 hPsi_associated_SNPs_24207 0 0 0 0 0 Cytosol 0.438062326614098 0.441667109455688 0.6851207 0 hPsi_site_17931 iPseU_CNN:0.6851207;iRNA_PseU:0 17932 chr16 57755605 57755605 1 + C A BLCA 57755604 + 57755584 57755624 41 GGAGGATGAGGATAAGAGCTTCGACATGCCCCACTCGTGGG GGAGGATGAGGATAAGAGCTTAGACATGCCCCACTCGTGGG < 41bp 0.525511046229314 0.865338808282718 0.526844 0.7982396 prediction 0.679655524106809 Functional Gain - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57755604 chr16:57755605 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24208 0 0 0 0 2 cytosol 0.438715652846811 0.438718477102993 0.5427912 0 hPsi_site_17932 iPseU_CNN:0.5427912;iRNA_PseU:0 17933 chrX 103040537 103040537 1 + C A UCEC 103040536 + 103040516 103040556 41 TTAGAGTGCTGTGCAAGATGTCTGGTAGGGGCCCCCTTTGC TTAGAGTGCTGTGCAAGATGTATGGTAGGGGCCCCCTTTGC < 41bp 0.522738659879918 0.86254944968691 0.33592778 0.69736713 prediction 0.679621579613983 Functional Gain - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103040536 chrX:103040537 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24209 0 0 1 0 1 Endoplasmic reticulum 0.43871859288275 0.438718592986439 0.39473426 0 hPsi_site_17933 iPseU_CNN:0.39473426;iRNA_PseU:0 17934 chr15 102516480 102516480 1 + G A BLCA 102516479 + 102516459 102516499 41 GGGAATCCTAGGGGGCTCCATGACACCTTCCCCCCCAGACC GGGAATCCTAGGGGGCTCCATAACACCTTCCCCCCCAGACC < 41bp 0.519353455809244 0.859160256685142 0.2257624 0.2644471 prediction 0.679613601751796 Functional Gain - WASH3P ENSG00000185596 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:102516479 chr15:102516480 . . 0 22 hPsi_associated_SNPs_24210 0 0 0 0 0 unknown 0.438716957339588 0.438718600574349 0 0 hPsi_site_17934 iPseU_CNN:0;iRNA_PseU:0 17935 chr16 56370697 56370697 1 + C A UCEC 56370696 + 56370676 56370716 41 CAAGAAGTGGATCCATTGCTTCGAGGACGTCACGGCCATCA CAAGAAGTGGATCCATTGCTTAGAGGACGTCACGGCCATCA < 41bp 0.517815280098179 0.857616522044407 0.46274087 0.6702156 prediction 0.679602483892455 Functional Gain - GNAO1 ENSG00000087258 CDS Human protein_coding chr16:56370696 chr16:56370697 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_24211 0 0 0 0 2 Endoplasmic reticulum 0.43871853233735 0.438718251465884 0.3404312 0 hPsi_site_17935 iPseU_CNN:0.3404312;iRNA_PseU:0 17936 chr11 60609977 60609977 1 + G A ESCA 60609976 + 60609956 60609996 41 CAAGTGAGGAGGCACCAAAGTGTTCTCAGGACCAGGGAGTA CAAGTGAGGAGGCACCAAAGTATTCTCAGGACCAGGGAGTA < 41bp 0.443959434579888 0.839800750776594 0.2768988 0.52150416 prediction 0.679601501553188 Functional Gain - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60609976 chr11:60609977 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24212 0 0 1 0 0 Ribosome 0.438718587464601 0.438718592358735 0.04300832 0 hPsi_site_17936 iPseU_CNN:0.04300832;iRNA_PseU:0 17937 chrX 70443955 70443955 1 + G A LUAD 70443954 + 70443934 70443974 41 ACATCTCAGGGACACTGTGGTGGACCTATGTCATCAGCGTG ACATCTCAGGGACACTGTGGTAGACCTATGTCATCAGCGTG < 41bp 0.430733731909524 0.839800525974318 0.40513936 0.76280653 prediction 0.679601051948637 Functional Gain - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70443954 chrX:70443955 stopgain 1.000 1 22 hPsi_associated_SNPs_24213 0 0 1 0 0 Endoplasmic reticulum 0.4399589480794 0.438717002992308 0.52561306 0 hPsi_site_17937 iPseU_CNN:0.52561306;iRNA_PseU:0 17938 chr19 47774924 47774924 1 + G A CESC 47774923 + 47774903 47774943 41 CCGGGTGAGGCCTGGCCTTTTGAGAGTGTATGAAGCTGGCT CCGGGTGAGGCCTGGCCTTTTAAGAGTGTATGAAGCTGGCT < 41bp 0.538721166254354 0.878520388623167 0.23394844 0.35186672 prediction 0.679598444737626 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47774923 chr19:47774924 nonsynonymous SNV 0.896 0 22 hPsi_associated_SNPs_24214 0 0 1 0 0 chromatin 0.438495037047404 0.438718589123677 0 0 hPsi_site_17938 iPseU_CNN:0;iRNA_PseU:0 17939 chr12 49948143 49948143 1 + G A SARC 49948142 + 49948122 49948162 41 AAGGGCGACCTGATCGGCTGTGAGCTGCCCCGGCGGGAGCA AAGGGCGACCTGATCGGCTGTAAGCTGCCCCGGCGGGAGCA < 41bp 0.43667341370294 0.83979373207866 0.217628 0.334594 prediction 0.679587464157321 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49948142 chr12:49948143 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24215 0 0 0 0 1 chromatin 0.43871844557463 0.438715709711314 0 0 hPsi_site_17939 iPseU_CNN:0;iRNA_PseU:0 17940 chr5 137803517 137803517 1 + C A BLCA 137803516 + 137803496 137803536 41 CGGTTACTACCTCTTATCCATCCCCGGCCACCACCTCATAC CGGTTACTACCTCTTATCCATACCCGGCCACCACCTCATAC < 41bp 0.499819039011825 0.839793056713973 0.27314374 0.5654454 prediction 0.679586113427947 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803516 chr5:137803517 nonsynonymous SNV 0.884 2 22 hPsi_associated_SNPs_24216 0 0 1 0 0 Cytosol 0.438718544663171 0.438718563930819 0.1308908 0 hPsi_site_17940 iPseU_CNN:0.1308908;iRNA_PseU:0 17941 chr17 7460466 7460466 1 + G A SARC 7460465 + 7460445 7460485 41 CCTGAAGCTGGACTTGCTGGTGGATGGTGTGCTGGCCCTGC CCTGAAGCTGGACTTGCTGGTAGATGGTGTGCTGGCCCTGC < 41bp 0.543628923154704 0.88342113273172 0.29659754 0.70063853 prediction 0.679584419154031 Functional Gain - TNFSF12 ENSG00000239697 CDS Human protein_coding chr17:7460465 chr17:7460466 synonymous SNV . 0 22 hPsi_associated_SNPs_24217 0 0 0 0 1 exosome 0.43871845103207 0.438717932514319 0.40127706 0 hPsi_site_17941 iPseU_CNN:0.40127706;iRNA_PseU:0 17942 chr1 155180379 155180379 1 + C A UCEC 155180378 + 155180358 155180398 41 GACCAGTCATGGAGAGGTCATCTCAGTTCCACACAAGATCA GACCAGTCATGGAGAGGTCATATCAGTTCCACACAAGATCA < 41bp 0.480931601797735 0.839790001489082 0.3662929 0.50739795 prediction 0.679580002978164 Functional Gain - MTX1 ENSG00000173171 CDS Human protein_coding chr1:155180378 chr1:155180379 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_24218 0 0 1 0 2 Ribosome 0.442011879154945 0.438512316033816 0.0147959 0 hPsi_site_17942 iPseU_CNN:0.0147959;iRNA_PseU:0 17943 chr3 39373942 39373942 1 + C A COAD 39373941 + 39373921 39373961 41 TGGCAAGTTGCTCCTTGCTGTCTTTTATTGCCTCCTGTTTG TGGCAAGTTGCTCCTTGCTGTATTTTATTGCCTCCTGTTTG < 41bp 0.50718840870657 0.84696396325421 0.3113795 0.66405046 prediction 0.67955110909528 Functional Gain - CCR8 ENSG00000179934 CDS Human protein_coding chr3:39373941 chr3:39373942 synonymous SNV . 0 22 hPsi_associated_SNPs_24219 0 0 0 0 0 exosome 0.438718591818487 0.438716872842454 0.32810092 0 hPsi_site_17943 iPseU_CNN:0.32810092;iRNA_PseU:0 17944 chr7 102087127 102087127 1 + G A LUAD 102087126 + 102087106 102087146 41 CGTGAGCAACATCCACAACCTGAACTCCATCAGCGAGTCCC CGTGAGCAACATCCACAACCTAAACTCCATCAGCGAGTCCC < 41bp 0.545666889910732 0.885441549767239 0.3164346 0.45141488 prediction 0.679549319713014 Functional Gain - ORAI2 ENSG00000160991 CDS Human protein_coding chr7:102087126 chr7:102087127 synonymous SNV . 0 22 hPsi_associated_SNPs_24220 0 0 1 0 0 Nucleus 0.438501311661611 0.438706004936875 0 0 hPsi_site_17944 iPseU_CNN:0;iRNA_PseU:0 17945 chr20 43042400 43042400 1 + C A UCEC 43042399 + 43042379 43042419 41 ATGAGGACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCAG ATGAGGACAGCAGCCTGCCCTACATCAATGCGCTCCTGCAG < 41bp 0.475173059294252 0.839774472325033 0.5702974 0.7159884 prediction 0.679548944650065 Functional Gain - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43042399 chr20:43042400 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_24221 0 0 1 0 2 Ribosome 0.438474243585723 0.438529529020468 0.291382 0 hPsi_site_17945 iPseU_CNN:0.291382;iRNA_PseU:0 17946 chrX 13752895 13752895 1 + G A rs2285635 13752894 + 13752874 13752914 41 GTGAGGCGGTCCTGCCTCGCTGCCTTCAGTCCCTAGTGTCT GTGAGGCGGTCCTGCCTCGCTACCTTCAGTCCCTAGTGTCT < 41bp 0.469311932474771 0.839769479486558 0.33609557 0.68987274 prediction 0.679538958973115 Functional Gain - OFD1 ENSG00000046651 UTR5 Human protein_coding chrX:13752894 chrX:13752895 . . 0 22 hPsi_associated_SNPs_24222 0 0 1 0 0 Ribosome 0.438718593541059 0.438718556168807 0.37974548 0 hPsi_site_17946 iPseU_CNN:0.37974548;iRNA_PseU:0 17947 chrX 48457993 48457993 1 + G A UCEC 48457992 + 48457972 48458012 41 CAGGCCCCCTGGCAGCGTGGTGCCCACGTCAGCAGCAGAGG CAGGCCCCCTGGCAGCGTGGTACCCACGTCAGCAGCAGAGG < 41bp 0.428936281292875 0.839766618393263 0.2689016 0.79340696 prediction 0.679533236786527 Functional Gain - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457992 chrX:48457993 synonymous SNV . 0 22 hPsi_associated_SNPs_24223 0 0 1 0 1 Ribosome 0.438718470147592 0.438624700537144 0.58681392 0 hPsi_site_17947 iPseU_CNN:0.58681392;iRNA_PseU:0 17948 chr16 90106768 90106768 1 + C T STAD 90106769 - 90106749 90106789 41 GGTTCTTGAACCCTGTCTTCTGCTGCACCTCCTGGATGGCT GGTTCTTGAACCCTGTCTTCTACTGCACCTCCTGGATGGCT < 41bp 0.544191391396999 0.883957711070647 0.30415803 0.6338729 prediction 0.679532639347297 Functional Gain - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90106769 chr16:90106768 stopgain 1.000 1 22 hPsi_associated_SNPs_24224 0 0 0 1 1 Ribosome 0.438718610866632 0.438718739545416 0.2677458 0 hPsi_site_17948 iPseU_CNN:0.2677458;iRNA_PseU:0 17949 chr11 57381961 57381961 1 + C A BLCA 57381960 + 57381940 57381980 41 TGTGGCCCGCACCCTGCTGGTCTTTGAAGTGCAGCAGCCCT TGTGGCCCGCACCCTGCTGGTATTTGAAGTGCAGCAGCCCT < 41bp 0.485033164666624 0.839763283213231 0.38913682 0.8379324 prediction 0.679526566426463 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57381960 chr11:57381961 synonymous SNV . 0 22 hPsi_associated_SNPs_24225 0 0 1 0 0 Endoplasmic reticulum 0.438718594161024 0.438718569836692 0.6758648 0 hPsi_site_17949 iPseU_CNN:0.6758648;iRNA_PseU:0 17950 chr12 55820418 55820418 1 + G A SKCM 55820417 + 55820397 55820437 41 TGTGGCTATATGTAAGCCTCTGCATTATACAACCATCATGA TGTGGCTATATGTAAGCCTCTACATTATACAACCATCATGA < 41bp 0.470902582312476 0.839761077166961 0.24738273 0.3072052 prediction 0.679522154333922 Functional Gain - OR6C76 ENSG00000185821 CDS Human protein_coding chr12:55820417 chr12:55820418 synonymous SNV . 0 22 hPsi_associated_SNPs_24226 0 0 0 0 0 unknown 0.438701823264703 0.4383223479433 0 0 hPsi_site_17950 iPseU_CNN:0;iRNA_PseU:0 17951 chr19 5137988 5137988 1 + C A UCEC 5137987 + 5137967 5138007 41 TCCCAGGTGGATCCACGTGATCTGTGCCATCGCAGTCCCCG TCCCAGGTGGATCCACGTGATATGTGCCATCGCAGTCCCCG < 41bp 0.516726472129633 0.856485894761515 0.9632571 0.95649225 prediction 0.679518845263763 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5137987 chr19:5137988 synonymous SNV . 0 22 hPsi_associated_SNPs_24227 0 0 1 0 2 Cytosol 0.438389279881358 0.441368817651937 0 0 hPsi_site_17951 iPseU_CNN:0;iRNA_PseU:0 17952 chr13 100172328 100172328 1 + C A STAD 100172327 + 100172307 100172347 41 CATCAGAAGGAAAGCGCCCATCTGAAAATCTTGGTCAGGTA CATCAGAAGGAAAGCGCCCATATGAAAATCTTGGTCAGGTA < 41bp 0.505623310475771 0.845381664202693 0.19455141 0.21977165 prediction 0.679516707453845 Functional Gain - TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100172327 chr13:100172328 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24228 0 0 1 0 2 Nucleus 0.438718593000315 0.438718600237537 0 0 hPsi_site_17952 iPseU_CNN:0;iRNA_PseU:0 17953 chr7 102949482 102949482 1 + C A UCEC 102949481 + 102949461 102949501 41 TTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACA TTGGGCACATCCAGATACAATATGTCTCATGGTTGCAAACA < 41bp 0.481026820222385 0.839757789943107 0.24580309 0.29705936 prediction 0.679515579886214 Functional Gain - PMPCB ENSG00000105819 CDS Human protein_coding chr7:102949481 chr7:102949482 synonymous SNV . 0 22 hPsi_associated_SNPs_24229 0 0 1 0 2 Ribosome 0.438718641483379 0.438649514258419 0 0 hPsi_site_17953 iPseU_CNN:0;iRNA_PseU:0 17954 chr9 71152351 71152351 1 + G T LUAD 71152352 - 71152332 71152372 41 GAGGTGGAAAAGCAGAGCTGTCCTGCAGAGAGAGAGGCCTC GAGGTGGAAAAGCAGAGCTGTACTGCAGAGAGAGAGGCCTC < 41bp 0.489611298354835 0.839756775901397 0.25403893 0.750882 prediction 0.679513551802795 Functional Gain - TMEM252 ENSG00000181778 CDS Human protein_coding chr9:71152352 chr9:71152351 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24230 0 0 0 0 1 exosome 0.438778313875305 0.438710675943938 0.501764 0 hPsi_site_17954 iPseU_CNN:0.501764;iRNA_PseU:0 17955 chr1 54427727 54427727 1 + G A UCEC 54427726 + 54427706 54427746 41 GGTAACCCTGAGATCACAGATGCAGGCATTGGATACCTCTT GGTAACCCTGAGATCACAGATACAGGCATTGGATACCTCTT < 41bp 0.544543122105986 0.884290399600737 0.18931553 0.28436443 prediction 0.679494554989501 Functional Gain - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54427726 chr1:54427727 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_24231 0 0 0 0 2 Ribosome 0.438702471747232 0.438718438184626 0 0 hPsi_site_17955 iPseU_CNN:0;iRNA_PseU:0 17956 chr11 5969162 5969162 1 + G A UCEC 5969161 + 5969141 5969181 41 TCCAGACTCTCCTGCGATGATGTCACCATCAATCACCTTTA TCCAGACTCTCCTGCGATGATATCACCATCAATCACCTTTA < 41bp 0.534301868933531 0.874048094568659 0.13958523 0.15931463 prediction 0.679492451270256 Functional Gain - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5969161 chr11:5969162 nonsynonymous SNV 0.025 0 22 hPsi_associated_SNPs_24232 0 0 0 0 0 unknown 0.438730704865367 0.438718632119347 0 0 hPsi_site_17956 iPseU_CNN:0;iRNA_PseU:0 17957 chr11 119059562 119059562 1 + C A rs141467859 119059561 + 119059541 119059581 41 TGTGTGGCCAGTGGGCCTCGTCTCTTCATCTCCCAGGTGAC TGTGTGGCCAGTGGGCCTCGTATCTTCATCTCCCAGGTGAC < 41bp 0.490094765641561 0.839736103034285 0.35989177 0.7687553 prediction 0.679472206068571 Functional Gain - PDZD3 ENSG00000172367 CDS Human protein_coding chr11:119059561 chr11:119059562 nonsynonymous SNV 0.218 0 22 hPsi_associated_SNPs_24233 0 0 0 0 1 exosome 0.441642998862596 0.432387259428754 0.5375106 0 hPsi_site_17957 iPseU_CNN:0.5375106;iRNA_PseU:0 17958 chr2 25351115 25351115 1 + G A UCEC 25351114 + 25351094 25351134 41 GAAGACGGTGAATGATGAACTGCAGGCCAATATCTGGGACC GAAGACGGTGAATGATGAACTACAGGCCAATATCTGGGACC < 41bp 0.426891938101982 0.839727499222021 0.3468786 0.41909137 prediction 0.679454998444042 Functional Gain - EFR3B ENSG00000084710 CDS Human protein_coding chr2:25351114 chr2:25351115 synonymous SNV . 0 22 hPsi_associated_SNPs_24234 0 0 0 0 2 Nucleus 0.43873465338984 0.441056915793349 0 0 hPsi_site_17958 iPseU_CNN:0;iRNA_PseU:0 17959 chr19 55418059 55418059 1 + C A UCEC 55418058 + 55418038 55418078 41 GCGGATTAACAAAGTCAAATTCTACATCCCGGACATGAACT GCGGATTAACAAAGTCAAATTATACATCCCGGACATGAACT < 41bp 0.499027321091923 0.839727306504811 0.35493368 0.55263305 prediction 0.679454613009623 Functional Gain - NCR1 ENSG00000189430 CDS Human protein_coding chr19:55418058 chr19:55418059 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_24235 0 0 0 0 0 exosome 0.438718077186975 0.438718705052849 0.1052661 0 hPsi_site_17959 iPseU_CNN:0.1052661;iRNA_PseU:0 17960 chr20 61907487 61907487 1 + G A LUSC 61907486 + 61907466 61907506 41 CAATCCTCAGTGGGTCAGTGTGACCTACGGCATCTGGATCT CAATCCTCAGTGGGTCAGTGTAACCTACGGCATCTGGATCT < 41bp 0.432578646608469 0.839725631019295 0.37143183 0.7280616 prediction 0.67945126203859 Functional Gain - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61907486 chr20:61907487 synonymous SNV . 0 22 hPsi_associated_SNPs_24236 0 0 1 0 2 Nucleus 0.438718592519875 0.438718725446997 0.4561232 0 hPsi_site_17960 iPseU_CNN:0.4561232;iRNA_PseU:0 17961 chr19 42862378 42862378 1 + G A BRCA 42862377 + 42862357 42862397 41 GTTCCGATTCCATGTGGAGCTGGCGGCCCCATCCCCCGAGC GTTCCGATTCCATGTGGAGCTAGCGGCCCCATCCCCCGAGC < 41bp 0.547370694944483 0.887091954006055 0.26814422 0.41597068 prediction 0.679442518123144 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42862377 chr19:42862378 synonymous SNV . 0 22 hPsi_associated_SNPs_24237 0 0 1 0 2 Endoplasmic reticulum 0.439411555172277 0.438633939466656 0 0 hPsi_site_17961 iPseU_CNN:0;iRNA_PseU:0 17962 chr11 124952154 124952154 1 + C A UCEC 124952153 + 124952133 124952173 41 TCCCCAGGGCGTGGTCGAGTTCTCTCTGTGTCTGCTGTTTG TCCCCAGGGCGTGGTCGAGTTATCTCTGTGTCTGCTGTTTG < 41bp 0.475098671841171 0.839719284585125 0.31371397 0.5105247 prediction 0.679438569170251 Functional Gain - SLC37A2 ENSG00000134955 CDS Human protein_coding chr11:124952153 chr11:124952154 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_24238 0 0 0 0 2 nucleolus 0.438718595870835 0.438717994892295 0.0210494000000001 0 hPsi_site_17962 iPseU_CNN:0.0210494000000001;iRNA_PseU:0 17963 chr1 180240979 180240979 1 + C T HNSC 180240980 - 180240960 180241000 41 TCTCTTTGGCCCTTCTGTTCTGAAACCAAACCTGCCACACA TCTCTTTGGCCCTTCTGTTCTAAAACCAAACCTGCCACACA < 41bp 0.448647269065744 0.839718141352021 0.3067355 0.6908853 prediction 0.679436282704041 Functional Gain - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180240980 chr1:180240979 stopgain 1.000 1 22 hPsi_associated_SNPs_24239 0 0 1 0 0 chromatin 0.438718463885361 0.438711891755406 0.3817706 0 hPsi_site_17963 iPseU_CNN:0.3817706;iRNA_PseU:0 17964 chr9 138413955 138413955 1 + G A UCEC 138413954 + 138413934 138413974 41 GGAGTTCCCTGAGATGAATCTGGAATCGGTGACACCCATGA GGAGTTCCCTGAGATGAATCTAGAATCGGTGACACCCATGA < 41bp 0.434911274362334 0.839717580542825 0.3262518 0.57517606 prediction 0.67943516108565 Functional Gain - LCN1 ENSG00000160349 CDS Human protein_coding chr9:138413954 chr9:138413955 synonymous SNV . 0 22 hPsi_associated_SNPs_24240 0 0 0 0 2 Nucleus 0.438718608981463 0.438718631352153 0.15035212 0 hPsi_site_17964 iPseU_CNN:0.15035212;iRNA_PseU:0 17965 chr17 42854318 42854318 1 + C A UCEC 42854317 + 42854297 42854337 41 CGGGACCGGCAGTGCCAGGTTCTTTGGGGCCATGGTGAGTC CGGGACCGGCAGTGCCAGGTTATTTGGGGCCATGGTGAGTC < 41bp 0.488555363959899 0.839714891822319 0.8524659 0.76239914 prediction 0.679429783644639 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42854317 chr17:42854318 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_24241 0 0 0 0 2 chromatin 0.438719327838466 0.438718594315027 0 0 hPsi_site_17965 iPseU_CNN:0;iRNA_PseU:0 17966 chr21 15599243 15599243 1 + G A SKCM 15599242 + 15599222 15599262 41 GTGCTGCAGCTTCCTTACTATGAAATGACAGCTCCACTTCC GTGCTGCAGCTTCCTTACTATAAAATGACAGCTCCACTTCC < 41bp 0.454115942488571 0.839709069018138 0.31673807 0.5426015 prediction 0.679418138036275 Functional Gain - RBM11 ENSG00000185272 CDS Human protein_coding chr21:15599242 chr21:15599243 nonsynonymous SNV 0.758 1 22 hPsi_associated_SNPs_24242 0 0 1 0 1 exosome 0.438718899457859 0.438735212228385 0.0852029999999999 0 hPsi_site_17966 iPseU_CNN:0.0852029999999999;iRNA_PseU:0 17967 chr14 38679152 38679152 1 + G A UCEC 38679151 + 38679131 38679171 41 GGGCGTGTGGGTGCTATCGCTGCTCGTCATCCTGCCCATCG GGGCGTGTGGGTGCTATCGCTACTCGTCATCCTGCCCATCG < 41bp 0.553389365044949 0.893096249012637 0.425325 0.9064072 prediction 0.679413767935376 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38679151 chr14:38679152 synonymous SNV . 0 22 hPsi_associated_SNPs_24243 0 0 0 0 0 nucleus 0.43794781865024 0.442710764034335 0.8128144 0 hPsi_site_17967 iPseU_CNN:0.8128144;iRNA_PseU:0 17968 chr20 25656669 25656669 1 + G T UCEC 25656670 - 25656650 25656690 41 AGCTTTAGCCAAAAGTCAACTCTTGTCTACCACCAGAGAAC AGCTTTAGCCAAAAGTCAACTATTGTCTACCACCAGAGAAC < 41bp 0.491771148390048 0.839693532241008 0.25136203 0.3392204 prediction 0.679387064482017 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656670 chr20:25656669 nonsynonymous SNV 0.019 3 22 hPsi_associated_SNPs_24244 0 0 0 0 0 Cytosol 0.438717414402873 0.438710806621234 0 0 hPsi_site_17968 iPseU_CNN:0;iRNA_PseU:0 17969 chr3 57545080 57545080 1 + G A BLCA 57545079 + 57545059 57545099 41 AGGACTCTTCTAAAAGGATATGTGTTGCTAATACCCATCTT AGGACTCTTCTAAAAGGATATATGTTGCTAATACCCATCTT < 41bp 0.44981056792561 0.839684446221944 0.3032779 0.26420224 prediction 0.679368892443889 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57545079 chr3:57545080 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_24245 0 0 1 0 2 Endoplasmic reticulum 0.438738243184038 0.438720686411963 0 0 hPsi_site_17969 iPseU_CNN:0;iRNA_PseU:0 17970 chr16 8839925 8839925 1 + G A SKCM 8839924 + 8839904 8839944 41 TGATTATGATGGGCCTCTGATGAAGACGGAAGTCCCAGGGC TGATTATGATGGGCCTCTGATAAAGACGGAAGTCCCAGGGC < 41bp 0.55269870746487 0.892383032226334 0.22945625 0.43862346 prediction 0.679368649522927 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8839924 chr16:8839925 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_24246 0 0 1 0 2 cytosol 0.438717682668244 0.437983243023384 0 0 hPsi_site_17970 iPseU_CNN:0;iRNA_PseU:0 17971 chr22 20128403 20128403 1 + G A SKCM 20128402 + 20128382 20128422 41 GCCCTGGTGCAGGTACGTGGTGGAGCCACCCCGGCTGCCGC GCCCTGGTGCAGGTACGTGGTAGAGCCACCCCGGCTGCCGC < 41bp 0.425330827759804 0.839681288889813 0.26259515 0.71182805 prediction 0.679362577779626 Functional Gain - ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20128402 chr22:20128403 synonymous SNV . 0 22 hPsi_associated_SNPs_24247 0 0 1 0 1 Endoplasmic reticulum 0.438718596914155 0.438718261687571 0.4236561 0 hPsi_site_17971 iPseU_CNN:0.4236561;iRNA_PseU:0 17972 chr3 183910606 183910606 1 + G A LUAD 183910605 + 183910585 183910625 41 GCCTGCAGGAATCTGAAGATTGGCTATTTCAGCCAGCACCA GCCTGCAGGAATCTGAAGATTAGCTATTTCAGCCAGCACCA < 41bp 0.434643146851326 0.839678126846732 0.22826546 0.2935508 prediction 0.679356253693465 Functional Gain - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183910605 chr3:183910606 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_24248 0 0 1 0 2 Cytosol 0.438719296022839 0.438831197047995 0 0 hPsi_site_17972 iPseU_CNN:0;iRNA_PseU:0 17973 chr11 4104523 4104523 1 + G A UCEC 4104522 + 4104502 4104542 41 GAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCT GAGCGAGGTGACAGCAGCATTACGGGAGCGCCTGCACCGCT < 41bp 0.423713347398333 0.839677405180954 0.28448904 0.62235224 prediction 0.679354810361908 Functional Gain - STIM1 ENSG00000167323 CDS Human protein_coding chr11:4104522 chr11:4104523 synonymous SNV . 0 22 hPsi_associated_SNPs_24249 0 0 1 0 1 Endoplasmic reticulum 0.43856583951574 0.438678910140338 0.24470448 0 hPsi_site_17973 iPseU_CNN:0.24470448;iRNA_PseU:0 17974 chr20 37168557 37168557 1 + C A STAD 37168556 + 37168536 37168576 41 ATAGTGGCAGCTTTTCAGTGTCTCTGTGTCTGGCTGACAGA ATAGTGGCAGCTTTTCAGTGTATCTGTGTCTGGCTGACAGA < 41bp 0.516986989456884 0.856663860113572 0.29731828 0.4170122 prediction 0.679353741313377 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37168556 chr20:37168557 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24250 0 0 1 0 1 Nucleus 0.438710694066332 0.438718790293229 0 0 hPsi_site_17974 iPseU_CNN:0;iRNA_PseU:0 17975 chr5 137206498 137206498 1 + C A LUAD 137206497 + 137206477 137206517 41 AGTGTACAGAGCAAAGATTTTCTGCCTCCTCAACACTGAGC AGTGTACAGAGCAAAGATTTTATGCCTCCTCAACACTGAGC < 41bp 0.519334291501411 0.859009957398118 0.20907372 0.497811 prediction 0.679351331793414 Functional Gain - MYOT ENSG00000120729 CDS Human protein_coding chr5:137206497 chr5:137206498 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24251 0 0 0 0 0 Cytosol 0.43872029473141 0.438721543919654 0 0 hPsi_site_17975 iPseU_CNN:0;iRNA_PseU:0 17976 chr22 24226946 24226946 1 + C A LIHC 24226945 + 24226925 24226965 41 AGGCAAGACCTTCCAAGAGATCTCCAAGGAATTACACAGAC AGGCAAGACCTTCCAAGAGATATCCAAGGAATTACACAGAC < 41bp 0.492692009955199 0.83966436610352 0.28375238 0.41894397 prediction 0.67932873220704 Functional Gain - SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24226945 chr22:24226946 synonymous SNV 0.675 0 22 hPsi_associated_SNPs_24252 0 0 0 0 0 nucleoplasm 0.438718790805247 0.438718616839868 0 0 hPsi_site_17976 iPseU_CNN:0;iRNA_PseU:0 17977 chrX 70321242 70321242 1 + C A LUAD 70321241 + 70321221 70321261 41 GTCCTCATGACCCAGGTAGATCCCATTCTGTCCCAGGCTCC GTCCTCATGACCCAGGTAGATACCATTCTGTCCCAGGCTCC < 41bp 0.511140761542769 0.850804300506733 0.29986727 0.68300885 prediction 0.679327077927929 Functional Gain - FOXO4 ENSG00000184481 CDS Human protein_coding chrX:70321241 chrX:70321242 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_24253 0 0 0 0 0 Cytosol 0.438718591395721 0.438718592995075 0.3660177 0 hPsi_site_17977 iPseU_CNN:0.3660177;iRNA_PseU:0 17978 chrX 148796198 148796198 1 + C A COAD 148796197 + 148796177 148796217 41 ACAGAAAGAGCCCCATATGGTCCACAACTACAGTGGTCCCA ACAGAAAGAGCCCCATATGGTACACAACTACAGTGGTCCCA < 41bp 0.496779181480217 0.83965801625366 0.28656256 0.68329495 prediction 0.679316032507321 Functional Gain - MAGEA11 ENSG00000185247 CDS Human protein_coding chrX:148796197 chrX:148796198 nonsynonymous SNV 0.012 1 22 hPsi_associated_SNPs_24254 0 0 0 0 2 exosome 0.438718592995013 0.43871859292123 0.3665899 0 hPsi_site_17978 iPseU_CNN:0.3665899;iRNA_PseU:0 17979 chr17 42850668 42850668 1 + G A UCEC 42850667 + 42850647 42850687 41 AACACTCGCATCGTCCTGGTTGCCATGGAAACATGGGCAGA AACACTCGCATCGTCCTGGTTACCATGGAAACATGGGCAGA < 41bp 0.427488144763399 0.83965418713852 0.23652148 0.6248999 prediction 0.679308374277041 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42850667 chr17:42850668 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24255 0 0 0 0 1 chromatin 0.438715512868635 0.438722606385616 0.2497998 0 hPsi_site_17979 iPseU_CNN:0.2497998;iRNA_PseU:0 17980 chr10 124909241 124909241 1 + G A HNSC 124909240 + 124909220 124909260 41 CGGCCGCGGGACGGCGGCGCTGAGCGGCAGGCCGGCGCGGC CGGCCGCGGGACGGCGGCGCTAAGCGGCAGGCCGGCGCGGC < 41bp 0.544860123904502 0.884508261391181 0.4032693 0.64102316 prediction 0.679296274973358 Functional Gain - HMX2 ENSG00000188816 CDS Human protein_coding chr10:124909240 chr10:124909241 nonsynonymous SNV 0.511 2 22 hPsi_associated_SNPs_24256 0 0 0 0 0 exosome 0.438721921793284 0.43871857301841 0.28204632 0 hPsi_site_17980 iPseU_CNN:0.28204632;iRNA_PseU:0 17981 chr11 75851994 75851994 1 + C A UCEC 75851993 + 75851973 75852013 41 AGACCGAGAGAAAGATAACATCTCTATCCTCCTCCTTGGAT AGACCGAGAGAAAGATAACATATCTATCCTCCTCCTTGGAT < 41bp 0.497892011112741 0.839644185641095 0.2492179 0.5337811 prediction 0.679288371282191 Functional Gain - UVRAG ENSG00000198382 CDS Human protein_coding chr11:75851993 chr11:75851994 nonsynonymous SNV 0.634 0 22 hPsi_associated_SNPs_24257 0 0 1 0 0 Ribosome 0.438718592972624 0.43871859126189 0.0675622 0 hPsi_site_17981 iPseU_CNN:0.0675622;iRNA_PseU:0 17982 chr5 480044 480044 1 + G T ACC 480045 - 480025 480065 41 CAGGAAGTTCCTCAGCAGGGTCCTCATGAGACGGTCGGCCC CAGGAAGTTCCTCAGCAGGGTACTCATGAGACGGTCGGCCC < 41bp 0.482508786229986 0.839638028621746 0.20138484 0.90448594 prediction 0.679276057243492 Functional Gain - SLC9A3 ENSG00000066230 CDS Human protein_coding chr5:480045 chr5:480044 synonymous SNV . 0 22 hPsi_associated_SNPs_24258 0 0 0 0 2 Ribosome 0.440020270052256 0.438713190069764 0.80897188 0 hPsi_site_17982 iPseU_CNN:0.80897188;iRNA_PseU:0 17983 chr1 147381226 147381226 1 + G A SKCM 147381225 + 147381205 147381245 41 CCCGGAGTGGATAAGGAGGGTGAAAAAGAAGAGCCGCAGTC CCCGGAGTGGATAAGGAGGGTAAAAAAGAAGAGCCGCAGTC < 41bp 0.539055247686727 0.878691641914626 0.40091896 0.70935243 prediction 0.679272788455799 Functional Gain - GJA8 ENSG00000121634 CDS Human protein_coding chr1:147381225 chr1:147381226 nonsynonymous SNV 0.659 1 22 hPsi_associated_SNPs_24259 0 0 0 0 0 unknown 0.438729353815277 0.438718558708825 0.41870486 0 hPsi_site_17983 iPseU_CNN:0.41870486;iRNA_PseU:0 17984 chr4 106196793 106196793 1 + G A SARC 106196792 + 106196772 106196812 41 AGGGAGATGGTTTCAGCAGTTGTACCATTAGACCAAATGTA AGGGAGATGGTTTCAGCAGTTATACCATTAGACCAAATGTA < 41bp 0.466010132506381 0.839635983025702 0.2949668 0.5172199 prediction 0.679271966051405 Functional Gain - TET2 ENSG00000168769 CDS Human protein_coding chr4:106196792 chr4:106196793 nonsynonymous SNV 0.056 1 22 hPsi_associated_SNPs_24260 0 0 1 0 0 Cytosol 0.438717573826104 0.438717429134459 0.0344397999999999 0 hPsi_site_17984 iPseU_CNN:0.0344397999999999;iRNA_PseU:0 17985 chr11 6898058 6898058 1 + G A UCEC 6898057 + 6898037 6898077 41 CTCTGCACTACAAAGTCCTATGTACTTCTTCCTCAGAAACT CTCTGCACTACAAAGTCCTATATACTTCTTCCTCAGAAACT < 41bp 0.539136726111125 0.878770870075012 0.32022896 0.3764515 prediction 0.679268287927775 Functional Gain - OR10A4 ENSG00000170782 CDS Human protein_coding chr11:6898057 chr11:6898058 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_24261 0 0 0 0 0 exosome 0.438813423838996 0.438704210224849 0 0 hPsi_site_17985 iPseU_CNN:0;iRNA_PseU:0 17986 chr12 58140003 58140003 1 + C A COAD 58140002 + 58139982 58140022 41 CTTCATCTTCCAATTTGTAATCTCTTGCTCATGTCTGGCTA CTTCATCTTCCAATTTGTAATATCTTGCTCATGTCTGGCTA < 41bp 0.498095048586363 0.839632850633867 0.56441176 0.7458225 prediction 0.679265701267735 Functional Gain - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140002 chr12:58140003 synonymous SNV . 0 22 hPsi_associated_SNPs_24262 0 0 1 0 2 Ribosome 0.439067304111703 0.438713738014889 0.36282148 0 hPsi_site_17986 iPseU_CNN:0.36282148;iRNA_PseU:0 17987 chr20 377161 377161 1 + G A BLCA 377160 + 377140 377180 41 CTCCTTCGTCGGGAGCCAGCTGAACGGCTCACAGCCACAGG CTCCTTCGTCGGGAGCCAGCTAAACGGCTCACAGCCACAGG < 41bp 0.447603117669904 0.839628058977375 0.29734695 0.7435053 prediction 0.67925611795475 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:377160 chr20:377161 nonsynonymous SNV 0.510 3 22 hPsi_associated_SNPs_24263 0 0 1 0 0 Ribosome 0.452410299366054 0.438664443017954 0.4870106 0 hPsi_site_17987 iPseU_CNN:0.4870106;iRNA_PseU:0 17988 chr2 178990837 178990837 1 + G A CESC 178990836 + 178990816 178990856 41 TGGAAAGATTCTGAATGGGGTGAGACTTAAAGTTATGCTGG TGGAAAGATTCTGAATGGGGTAAGACTTAAAGTTATGCTGG < 41bp 0.453880147589599 0.839618660745444 0.26361465 0.5503921 prediction 0.679237321490887 Functional Gain - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178990836 chr2:178990837 synonymous SNV . 0 22 hPsi_associated_SNPs_24264 0 0 0 0 1 Nucleus 0.438718593001054 0.438718592995166 0.1007842 0 hPsi_site_17988 iPseU_CNN:0.1007842;iRNA_PseU:0 17989 chr16 84199429 84199429 1 + G A BRCA 84199428 + 84199408 84199448 41 GCTAGGGGAGGGTACGCAGCTGAAAAGGAGGAGAGACAGCA GCTAGGGGAGGGTACGCAGCTAAAAAGGAGGAGAGACAGCA < 41bp 0.424446330309508 0.839615704575374 0.3454101 0.5990251 prediction 0.679231409150748 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84199428 chr16:84199429 nonsynonymous SNV 0.367 4 22 hPsi_associated_SNPs_24265 0 0 0 0 1 Cytosol 0.439283464854862 0.438632369748307 0.1980502 0 hPsi_site_17989 iPseU_CNN:0.1980502;iRNA_PseU:0 17990 chr2 233245430 233245430 1 + G A HNSC 233245429 + 233245409 233245449 41 AGAGGCTGCCCTGCGCCTGCTGAGCAGGAACCCCCGCGGCT AGAGGCTGCCCTGCGCCTGCTAAGCAGGAACCCCCGCGGCT < 41bp 0.558946991988539 0.898560137762484 0.22393826 0.60922647 prediction 0.679226291547891 Functional Gain - ALPP ENSG00000163283 CDS Human protein_coding chr2:233245429 chr2:233245430 synonymous SNV . 0 22 hPsi_associated_SNPs_24266 0 0 0 0 1 Endoplasmic reticulum 0.438718599052348 0.438718592950114 0.21845294 0 hPsi_site_17990 iPseU_CNN:0.21845294;iRNA_PseU:0 17991 chr1 28891257 28891257 1 + G A rs145363074 28891256 + 28891236 28891276 41 GGGGGACCTGACCCCGGACGTGGATGATGGCATGCTGTATG GGGGGACCTGACCCCGGACGTAGATGATGGCATGCTGTATG < 41bp 0.431515421952407 0.839611522028164 0.18869436 0.25185347 prediction 0.679223044056328 Functional Gain - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28891256 chr1:28891257 synonymous SNV . 0 22 hPsi_associated_SNPs_24267 0 0 1 0 2 Ribosome 0.438718586165492 0.438718636458767 0 0 hPsi_site_17991 iPseU_CNN:0;iRNA_PseU:0 17992 chr14 62462844 62462844 1 + C A LUAD 62462843 + 62462823 62462863 41 AGCAAGCAGGAGATATGTTATCTGCTTCGCTGGTTAACATA AGCAAGCAGGAGATATGTTATATGCTTCGCTGGTTAACATA < 41bp 0.5020590761647 0.841669565361417 0.49263287 0.7069541 prediction 0.679220978393434 Functional Gain - SYT16 ENSG00000139973 CDS Human protein_coding chr14:62462843 chr14:62462844 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_24268 0 0 0 0 0 exosome 0.438718581974957 0.438718443654939 0.4139082 0 hPsi_site_17992 iPseU_CNN:0.4139082;iRNA_PseU:0 17993 chr10 42972812 42972812 1 + G A rs372358387 42972811 + 42972791 42972831 41 ATAGCGACCTCGCCTTCCGCTGCGCGTCCTCCCAGAGCCCA ATAGCGACCTCGCCTTCCGCTACGCGTCCTCCCAGAGCCCA < 41bp 0.524080661191926 0.86369008315088 0.44954962 0.9565413 prediction 0.679218843917909 Functional Gain - LINC00839 ENSG00000185904 ncRNA_exonic Human lincRNA chr10:42972811 chr10:42972812 . . 0 22 hPsi_associated_SNPs_24269 0 0 0 2 0 unknown 0.438721856517056 0.439032531315978 0.9130826 0 hPsi_site_17993 iPseU_CNN:0.9130826;iRNA_PseU:0 17994 chr5 149576737 149576737 1 + G A CESC 149576736 + 149576716 149576756 41 GGGAGCACTGTGGCAACTGGTGGAACACAGAACTCTGCCTG GGGAGCACTGTGGCAACTGGTAGAACACAGAACTCTGCCTG < 41bp 0.431963354792384 0.839606660905268 0.36822316 0.7132294 prediction 0.679213321810536 Functional Gain - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149576736 chr5:149576737 stopgain 1.000 1 22 hPsi_associated_SNPs_24270 0 0 0 0 0 exosome 0.438732800684639 0.438718590995867 0.4264588 0 hPsi_site_17994 iPseU_CNN:0.4264588;iRNA_PseU:0 17995 chr22 45683173 45683173 1 + G A COAD 45683172 + 45683152 45683192 41 TGGCCTTTGACCTGATCCCCTGCAGTGACCTGCCCAGCCTG TGGCCTTTGACCTGATCCCCTACAGTGACCTGCCCAGCCTG < 41bp 0.437899722335579 0.83960319536773 0.27863586 0.3915376 prediction 0.67920639073546 Functional Gain - UPK3A ENSG00000100373 CDS Human protein_coding chr22:45683172 chr22:45683173 nonsynonymous SNV 0.579 4 22 hPsi_associated_SNPs_24271 0 0 0 0 0 exosome 0.438718100635304 0.438715876380156 0 0 hPsi_site_17995 iPseU_CNN:0;iRNA_PseU:0 17996 chr11 5969506 5969506 1 + G A UCEC 5969505 + 5969485 5969525 41 TAAGCAGGGAATGCAGAGGTTGTTGAAGAAAGGGTGCTAAC TAAGCAGGGAATGCAGAGGTTATTGAAGAAAGGGTGCTAAC < 41bp 0.523851791894167 0.863453620637784 0.28990144 0.62363255 prediction 0.679203657487234 Functional Gain - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5969505 chr11:5969506 synonymous SNV . 0 22 hPsi_associated_SNPs_24272 0 0 0 0 0 unknown 0.438703239262875 0.438712464807502 0.2472651 0 hPsi_site_17996 iPseU_CNN:0.2472651;iRNA_PseU:0 17997 chr19 58379941 58379941 1 + G A rs2889009 58379940 + 58379920 58379960 41 GCCTGACAAACATGGAGAAATGTCATCCCTATTTAAAAAAA GCCTGACAAACATGGAGAAATATCATCCCTATTTAAAAAAA < 41bp 0.487063635077541 0.839598288991972 0.36127377 0.40931743 prediction 0.679196577983943 Functional Gain - UBE2CP5 ENSG00000204514 CDS Human protein_coding chr19:58379940 chr19:58379941 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24273 0 0 1 0 0 unknown 0.438717492225655 0.438717966667661 0 0 hPsi_site_17997 iPseU_CNN:0;iRNA_PseU:0 17998 chr10 23482821 23482821 1 + G A UCEC 23482820 + 23482800 23482840 41 ATAGAAAACGAACCACCATTTGAGTTTGTGTCCTGAGAAGT ATAGAAAACGAACCACCATTTAAGTTTGTGTCCTGAGAAGT < 41bp 0.460772816515398 0.839592830439007 0.25159404 0.42489323 prediction 0.679185660878014 Functional Gain - PTF1A ENSG00000168267 CDS Human protein_coding chr10:23482820 chr10:23482821 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24274 0 0 0 0 0 exosome 0.438721014898442 0.438718609539747 0 0 hPsi_site_17998 iPseU_CNN:0;iRNA_PseU:0 17999 chr10 91143608 91143608 1 + G A rs73369750 91143607 + 91143587 91143627 41 GAAAACCCTGAATTCAATACTGGGTACGCAATCACCGTCTA GAAAACCCTGAATTCAATACTAGGTACGCAATCACCGTCTA < 41bp 0.447283622016274 0.839592821771466 0.2115444 0.24112815 prediction 0.679185643542932 Functional Gain - IFIT1B ENSG00000204010 CDS Human protein_coding chr10:91143607 chr10:91143608 nonsynonymous SNV 0.076 3 22 hPsi_associated_SNPs_24275 0 0 0 0 0 exosome 0.434707510263767 0.438716317858073 0 0 hPsi_site_17999 iPseU_CNN:0;iRNA_PseU:0 18000 chr2 27282078 27282078 1 + C A LIHC 27282077 + 27282057 27282097 41 GTGGGTTGCCTGTCTCCTGCTCCGAAAACACCTTGAGTCGG GTGGGTTGCCTGTCTCCTGCTACGAAAACACCTTGAGTCGG < 41bp 0.481000913099465 0.839590284881898 0.16666988 0.32603714 prediction 0.679180569763796 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282077 chr2:27282078 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_24276 0 0 0 0 1 Cytosol 0.438721971685587 0.438323208438434 0 0 hPsi_site_18000 iPseU_CNN:0;iRNA_PseU:0 18001 chr17 7847499 7847499 1 + C A LUSC 7847498 + 7847478 7847518 41 GAGCTGGCCAGTCAGCTAGCTCAGTTCAAGGTGGAAATGGC GAGCTGGCCAGTCAGCTAGCTAAGTTCAAGGTGGAAATGGC < 41bp 0.477076865343632 0.839586211743801 0.30659088 0.70723915 prediction 0.679172423487602 Functional Gain - CNTROB ENSG00000170037 CDS Human protein_coding chr17:7847498 chr17:7847499 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_24277 0 0 1 0 2 Nucleus 0.438178127290066 0.438945989810641 0.4144783 0 hPsi_site_18001 iPseU_CNN:0.4144783;iRNA_PseU:0 18002 chr17 72297269 72297269 1 + G A rs145798624 72297268 + 72297248 72297288 41 AAGAAGGAACAGTTGGAAAATGCCTTGGGGGCCATCTCCCT AAGAAGGAACAGTTGGAAAATACCTTGGGGGCCATCTCCCT < 41bp 0.425836281477958 0.839582283666341 0.5035997 0.69146657 prediction 0.679164567332682 Functional Gain - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72297268 chr17:72297269 nonsynonymous SNV 0.744 1 22 hPsi_associated_SNPs_24278 1 0 0 0 2 exosome 0.438718939893311 0.43871907412237 0.37573374 0 hPsi_site_18002 iPseU_CNN:0.37573374;iRNA_PseU:0 18003 chr2 158157469 158157469 1 + C A UCEC 158157468 + 158157448 158157488 41 CAAATGGTACTTGGAGAATGTCTTTCCTGACTTAAGGGCTC CAAATGGTACTTGGAGAATGTATTTCCTGACTTAAGGGCTC < 41bp 0.508244976340226 0.847823154278025 0.36534622 0.64548457 prediction 0.679156355875599 Functional Gain - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158157468 chr2:158157469 synonymous SNV . 0 22 hPsi_associated_SNPs_24279 0 0 0 1 1 Exosome 0.438719120185265 0.438718578473849 0.29096914 0 hPsi_site_18003 iPseU_CNN:0.29096914;iRNA_PseU:0 18004 chr4 79516998 79516998 1 + C A COAD 79516997 + 79516977 79517017 41 GGGCACGGATGAAGACAAATTCACTGAGATCCTGTGTTTAA GGGCACGGATGAAGACAAATTAACTGAGATCCTGTGTTTAA < 41bp 0.488019582215406 0.83957817286518 0.20992562 0.37432766 prediction 0.679156345730359 Functional Gain - ANXA3 ENSG00000138772 CDS Human protein_coding chr4:79516997 chr4:79516998 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24280 0 0 0 0 2 cytosol 0.438677673682409 0.438725683720837 0 0 hPsi_site_18004 iPseU_CNN:0;iRNA_PseU:0 18005 chr5 132408967 132408967 1 + G A rs61755724 132408966 + 132408946 132408986 41 GAAAGACGATCAGTGATGGATGCAACACAGATTGCTGGTCT GAAAGACGATCAGTGATGGATACAACACAGATTGCTGGTCT < 41bp 0.547885783753939 0.887457687350049 0.36046827 0.7466355 prediction 0.67914380719222 Functional Gain - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132408966 chr5:132408967 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24281 0 0 1 0 2 Cytosol 0.437342318115275 0.437500043321959 0.493271 0 hPsi_site_18005 iPseU_CNN:0.493271;iRNA_PseU:0 18006 chr1 86047927 86047927 1 + G A BLCA 86047926 + 86047906 86047946 41 GTTGACGAGAAACAATGAATTGATTGCAGTTGGAAAAGGCA GTTGACGAGAAACAATGAATTAATTGCAGTTGGAAAAGGCA < 41bp 0.437705163605599 0.839561702280704 0.3210338 0.4902959 prediction 0.679123404561408 Functional Gain - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047926 chr1:86047927 synonymous SNV . 0 22 hPsi_associated_SNPs_24282 0 0 1 0 1 Endoplasmic reticulum 0.438417983807516 0.438704551624625 0 0 hPsi_site_18006 iPseU_CNN:0;iRNA_PseU:0 18007 chr22 24648654 24648654 1 + G A rs200588707 24648653 + 24648633 24648673 41 CTGGGGTACCGGGTCACTGTTGAAGACCTGGACCGGGAGAA CTGGGGTACCGGGTCACTGTTAAAGACCTGGACCGGGAGAA < 41bp 0.478132809383333 0.83955476576265 0.5158831 0.71569467 prediction 0.679109531525299 Functional Gain - POM121L9P ENSG00000128262 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:24648653 chr22:24648654 . . 0 22 hPsi_associated_SNPs_24283 0 0 0 0 0 unknown 0.43871920230462 0.438718592856918 0.39962314 0 hPsi_site_18007 iPseU_CNN:0.39962314;iRNA_PseU:0 18008 chr3 152174066 152174066 1 + G A OV 152174065 + 152174045 152174085 41 CCCTCCGAAAGTTCCCATGGTGCACGGTGCTACGCCAGCCA CCCTCCGAAAGTTCCCATGGTACACGGTGCTACGCCAGCCA < 41bp 0.53956467441851 0.879109441126697 0.28831792 0.70427144 prediction 0.679089533416374 Functional Gain - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152174065 chr3:152174066 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24284 0 0 1 0 2 Cytosol 0.438491354506851 0.438697786693177 0.40854288 0 hPsi_site_18008 iPseU_CNN:0.40854288;iRNA_PseU:0 18009 chr5 154396474 154396474 1 + G A GBM 154396473 + 154396453 154396493 41 CTATCTCCAGACTCTTCTTTTGAATATATCCCACCTAAGCC CTATCTCCAGACTCTTCTTTTAAATATATCCCACCTAAGCC < 41bp 0.463656134864191 0.83954358210549 0.2854998 0.40812987 prediction 0.679087164210981 Functional Gain - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154396473 chr5:154396474 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24285 0 0 0 0 0 exosome 0.438718392211215 0.438718593002214 0 0 hPsi_site_18009 iPseU_CNN:0;iRNA_PseU:0 18010 chr19 56125984 56125984 1 + G A rs567026065 56125983 + 56125963 56126003 41 GCAGACGGGAGCGCCGCCCCTGCTGGTGTTGGGGTGCCCCC GCAGACGGGAGCGCCGCCCCTACTGGTGTTGGGGTGCCCCC < 41bp 0.511607562909404 0.85115075213507 0.27491114 0.3235582 prediction 0.679086378451333 Functional Gain - ZNF865 ENSG00000261221 CDS Human protein_coding chr19:56125983 chr19:56125984 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_24286 0 0 0 0 0 chromatin 0.438718595771054 0.438718852871687 0 0 hPsi_site_18010 iPseU_CNN:0;iRNA_PseU:0 18011 chr12 6884441 6884441 1 + C A HNSC 6884440 + 6884420 6884460 41 GGTTTTCTTTTCTCTTCAGGTCTGGAGCCCCCAACTCCCTT GGTTTTCTTTTCTCTTCAGGTATGGAGCCCCCAACTCCCTT < 41bp 0.485219569852273 0.839539000154727 0.2994389 0.39131606 prediction 0.679078000309454 Functional Gain - LAG3 ENSG00000089692 CDS Human protein_coding chr12:6884440 chr12:6884441 nonsynonymous SNV 0.962 2 22 hPsi_associated_SNPs_24287 0 0 0 0 1 exosome 0.438718592696394 0.438718592995053 0 0 hPsi_site_18011 iPseU_CNN:0;iRNA_PseU:0 18012 chr5 140503233 140503233 1 + G A SKCM 140503232 + 140503212 140503252 41 GCTGGTGCGCGTGCTGGTGCTGGACACCAACGACAACTCGC GCTGGTGCGCGTGCTGGTGCTAGACACCAACGACAACTCGC < 41bp 0.445053766797938 0.839537089641929 0.25806767 0.7380204 prediction 0.679074179283859 Functional Gain - PCDHB4 ENSG00000081818 CDS Human protein_coding chr5:140503232 chr5:140503233 synonymous SNV . 0 22 hPsi_associated_SNPs_24288 0 0 0 0 0 exosome 0.435290657272216 0.435841667312455 0.4760408 0 hPsi_site_18012 iPseU_CNN:0.4760408;iRNA_PseU:0 18013 chr1 107600219 107600219 1 + G A BLCA 107600218 + 107600198 107600238 41 CTTTGCCATCTGGTTCCAGGTGACCTTCCCTGGAGGGGAGT CTTTGCCATCTGGTTCCAGGTAACCTTCCCTGGAGGGGAGT < 41bp 0.538909861461876 0.878446200757493 0.15699115 0.615219 prediction 0.679072678591234 Functional Gain - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600218 chr1:107600219 synonymous SNV . 0 22 hPsi_associated_SNPs_24289 0 0 1 0 0 Ribosome 0.438718592994545 0.438718592995102 0.230438 0 hPsi_site_18013 iPseU_CNN:0.230438;iRNA_PseU:0 18014 chr7 128445497 128445497 1 + C A UCEC 128445496 + 128445476 128445516 41 TCAGACTTCAGAAATGGATTTCTTAGAGCCTGATCCTGAAA TCAGACTTCAGAAATGGATTTATTAGAGCCTGATCCTGAAA < 41bp 0.528172520505212 0.867706740816768 0.31113014 0.5710872 prediction 0.679068440623113 Functional Gain - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445496 chr7:128445497 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_24290 0 0 1 0 2 chromatin 0.438718312167601 0.438718275203446 0.1421744 0 hPsi_site_18014 iPseU_CNN:0.1421744;iRNA_PseU:0 18015 chr21 33684066 33684066 1 + G A UCEC 33684065 + 33684045 33684085 41 TCCACCTCTGCATCCAGAAGTGCCTGCCGTGCCACAGGGAA TCCACCTCTGCATCCAGAAGTACCTGCCGTGCCACAGGGAA < 41bp 0.548519532009342 0.888050916097869 0.28214544 0.37292212 prediction 0.679062768177052 Functional Gain - MRAP ENSG00000170262 CDS Human protein_coding chr21:33684065 chr21:33684066 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_24291 0 0 0 0 1 chromatin 0.438727850629585 0.438657891832648 0 0 hPsi_site_18015 iPseU_CNN:0;iRNA_PseU:0 18016 chr11 2610059 2610059 1 + C A UCEC 2610058 + 2610038 2610078 41 AGAGCGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACA AGAGCGGCGGCTGGACCACTTATCTGTCGACGGCTATGACA < 41bp 0.505697509155734 0.845222398221334 0.28245157 0.32739705 prediction 0.6790497781312 Functional Gain - KCNQ1 ENSG00000053918 CDS Human protein_coding chr11:2610058 chr11:2610059 nonsynonymous SNV 0.030 1 22 hPsi_associated_SNPs_24292 0 0 0 0 1 Nucleus 0.438613968097764 0.438713982336279 0 0 hPsi_site_18016 iPseU_CNN:0;iRNA_PseU:0 18017 chr11 55340089 55340089 1 + G A SKCM 55340088 + 55340068 55340108 41 AGTTCAGATTTTTCTTGCCCTGAGTTTGCCATTCTGTGGCC AGTTCAGATTTTTCTTGCCCTAAGTTTGCCATTCTGTGGCC < 41bp 0.531234026463794 0.870750995931747 0.21986121 0.2720106 prediction 0.679033938935907 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55340088 chr11:55340089 synonymous SNV . 0 22 hPsi_associated_SNPs_24293 0 0 0 0 0 unknown 0.438718056035527 0.438818606985683 0 0 hPsi_site_18017 iPseU_CNN:0;iRNA_PseU:0 18018 chr1 248524899 248524899 1 + G A GBM 248524898 + 248524878 248524918 41 ACCTCATGGACAACATCACCTGGATGGCCAGCCACACTGGA ACCTCATGGACAACATCACCTAGATGGCCAGCCACACTGGA < 41bp 0.477561939177492 0.839516815339709 0.30114776 0.34138715 prediction 0.679033630679418 Functional Gain - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248524898 chr1:248524899 stopgain 0.013 0 22 hPsi_associated_SNPs_24294 0 0 0 0 0 unknown 0.43906811670833 0.438716443923128 0 0 hPsi_site_18018 iPseU_CNN:0;iRNA_PseU:0 18019 chr22 31302310 31302310 1 + G A PRAD 31302309 + 31302289 31302329 41 AGAAGCAAGACTGGCATATGTGCCCCAACATCTTCTGAGCG AGAAGCAAGACTGGCATATGTACCCCAACATCTTCTGAGCG < 41bp 0.451166168031158 0.839516759601904 0.32527423 0.5771702 prediction 0.679033519203807 Functional Gain - OSBP2 ENSG00000184792 CDS Human protein_coding chr22:31302309 chr22:31302310 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24295 0 0 0 0 0 Cytosol 0.43882209855597 0.439176515470373 0.1543404 0 hPsi_site_18019 iPseU_CNN:0.1543404;iRNA_PseU:0 18020 chr18 627220 627220 1 + G A OV 627219 + 627199 627239 41 CAATTGACCCAAATGGAGGATGTGTTCAGCCAGTTGACTGT CAATTGACCCAAATGGAGGATATGTTCAGCCAGTTGACTGT < 41bp 0.43411273149372 0.839512903648279 0.26487553 0.54078394 prediction 0.679025807296558 Functional Gain - CLUL1 ENSG00000079101 CDS Human protein_coding chr18:627219 chr18:627220 nonsynonymous SNV 0.277 0 22 hPsi_associated_SNPs_24296 0 0 0 0 0 cytosol 0.438718592751029 0.438718597996197 0.0815678799999999 0 hPsi_site_18020 iPseU_CNN:0.0815678799999999;iRNA_PseU:0 18021 chr15 90766958 90766958 1 + C A UCEC 90766957 + 90766937 90766977 41 TGACACCCTTTTCTATGGGGTCTTCACTTCCCAGTGGTAGG TGACACCCTTTTCTATGGGGTATTCACTTCCCAGTGGTAGG < 41bp 0.519821810247263 0.859328982637216 0.42164877 0.80712634 prediction 0.679014344779905 Functional Gain - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90766957 chr15:90766958 synonymous SNV . 0 22 hPsi_associated_SNPs_24297 0 0 1 0 1 chromatin 0.438718588209973 0.438740987265654 0.61425268 0 hPsi_site_18021 iPseU_CNN:0.61425268;iRNA_PseU:0 18022 chr1 159778071 159778071 1 + C A UCEC 159778070 + 159778050 159778090 41 ACCACTGTCTCAGGTGAAGTTCTACAGAGATGGAAAATTCC ACCACTGTCTCAGGTGAAGTTATACAGAGATGGAAAATTCC < 41bp 0.511969494667751 0.851476470674413 0.36417657 0.3490201 prediction 0.679013952013324 Functional Gain - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159778070 chr1:159778071 nonsynonymous SNV 0.022 2 22 hPsi_associated_SNPs_24298 0 0 0 0 0 exosome 0.438717670512027 0.43871859017385 0 0 hPsi_site_18022 iPseU_CNN:0;iRNA_PseU:0 18023 chr20 37356214 37356214 1 + G A STAD 37356213 + 37356193 37356233 41 CAAGATCCTCATCGCGTGCCTGTACGAGGAGAATGAAGACG CAAGATCCTCATCGCGTGCCTATACGAGGAGAATGAAGACG < 41bp 0.542183607236497 0.881689079212426 0.19350359 0.6172558 prediction 0.67901094395186 Functional Gain - SLC32A1 ENSG00000101438 CDS Human protein_coding chr20:37356213 chr20:37356214 synonymous SNV . 0 22 hPsi_associated_SNPs_24299 0 0 0 0 0 exosome 0.434391923107438 0.43856041663051 0.2345116 0 hPsi_site_18023 iPseU_CNN:0.2345116;iRNA_PseU:0 18024 chr1 24795530 24795530 1 + C A UCEC 24795529 + 24795509 24795549 41 TCCAGCCTGAACTTAAAGCTTCTTTTTCCTATGGGGCTCTG TCCAGCCTGAACTTAAAGCTTATTTTTCCTATGGGGCTCTG < 41bp 0.500427464322151 0.839930095349731 0.24255514 0.27092764 prediction 0.679005262055161 Functional Gain - NIPAL3 ENSG00000001461 CDS Human protein_coding chr1:24795529 chr1:24795530 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24300 0 0 1 0 1 Endoplasmic reticulum 0.438718596848267 0.438743595581896 0 0 hPsi_site_18024 iPseU_CNN:0;iRNA_PseU:0 18025 chr3 178938822 178938822 1 + G A UCEC 178938821 + 178938801 178938841 41 CCAGAGGTTTGGCCTGCTTTTGGAGTCCTATTGTCGTGCAT CCAGAGGTTTGGCCTGCTTTTAGAGTCCTATTGTCGTGCAT < 41bp 0.550169232141002 0.889671419127862 0.34590158 0.6924556 prediction 0.679004373973719 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178938821 chr3:178938822 synonymous SNV . 0 22 hPsi_associated_SNPs_24301 0 0 0 0 1 Ribosome 0.438718517830274 0.438726730869695 0.3849112 0 hPsi_site_18025 iPseU_CNN:0.3849112;iRNA_PseU:0 18026 chr12 10343011 10343011 1 + G A rs10431295 10343010 + 10342990 10343030 41 AAACCAGGAAAGCATCAAGGTGTCTTGAATTCCTTTAACTA AAACCAGGAAAGCATCAAGGTATCTTGAATTCCTTTAACTA < 41bp 0.539882462231956 0.879380989591074 0.19776356 0.6075846 prediction 0.678997054718236 Functional Gain - TMEM52B ENSG00000165685 UTR3 Human protein_coding chr12:10343010 chr12:10343011 . . 0 22 hPsi_associated_SNPs_24302 0 0 0 0 0 nucleus 0.438718596366505 0.438718593136855 0.2151692 0 hPsi_site_18026 iPseU_CNN:0.2151692;iRNA_PseU:0 18027 chr14 24886608 24886608 1 + G A KIRC 24886607 + 24886587 24886627 41 AGCAGTCTGATGAAGGCCTTTGCCAAGAGTGGCACCCCGCT AGCAGTCTGATGAAGGCCTTTACCAAGAGTGGCACCCCGCT < 41bp 0.454430362580617 0.839490629073569 0.2520277 0.6329292 prediction 0.678981258147137 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24886607 chr14:24886608 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_24303 0 0 0 0 0 Exosome 0.438718639563184 0.438718619727588 0.2658584 0 hPsi_site_18027 iPseU_CNN:0.2658584;iRNA_PseU:0 18028 chr12 5603417 5603417 1 + C A COAD 5603416 + 5603396 5603436 41 TATGTGATATTTCTCGCTTATCTCCGTGGCATCCAAGGTAA TATGTGATATTTCTCGCTTATATCCGTGGCATCCAAGGTAA < 41bp 0.496926300883391 0.839490304544148 0.39410052 0.64345556 prediction 0.678980609088296 Functional Gain - NTF3 ENSG00000185652 CDS Human protein_coding chr12:5603416 chr12:5603417 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24304 0 0 0 0 1 exosome 0.438726435440782 0.438714009383252 0.28691112 0 hPsi_site_18028 iPseU_CNN:0.28691112;iRNA_PseU:0 18029 chr2 200824552 200824552 1 + G A LUAD 200824551 + 200824531 200824571 41 GCCCTTGCTGCTAACATAGATGAAATTGTATTTACATCAAC GCCCTTGCTGCTAACATAGATAAAATTGTATTTACATCAAC < 41bp 0.544960294412317 0.884445907608365 0.23525557 0.28798988 prediction 0.678971226392097 Functional Gain - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824551 chr2:200824552 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_24305 0 0 1 0 2 unknown 0.433964939404479 0.433300136422572 0 0 hPsi_site_18029 iPseU_CNN:0;iRNA_PseU:0 18030 chr7 142636705 142636705 1 + G A UCEC 142636704 + 142636684 142636724 41 CAGGGGGCGGCCAAAGGCAGTGGGTGGGCAGGTCCATGCCT CAGGGGGCGGCCAAAGGCAGTAGGTGGGCAGGTCCATGCCT < 41bp 0.544067884972387 0.883549978314124 0.27382705 0.37733644 prediction 0.678964186683473 Functional Gain - C7orf34 ENSG00000165131 CDS Human protein_coding chr7:142636704 chr7:142636705 stopgain 0.000 0 22 hPsi_associated_SNPs_24306 0 0 0 0 0 exosome 0.438718603135442 0.438718592787854 0 0 hPsi_site_18030 iPseU_CNN:0;iRNA_PseU:0 18031 chr8 22398207 22398207 1 + G A UCEC 22398206 + 22398186 22398226 41 GGACCGAATTAATGAGCGAATGCCACCCCGAAAGGATAGCA GGACCGAATTAATGAGCGAATACCACCCCGAAAGGATAGCA < 41bp 0.548818217969982 0.88829982282589 0.3123315 0.7362627 prediction 0.678963209711817 Functional Gain - PPP3CC ENSG00000120910 CDS Human protein_coding chr8:22398206 chr8:22398207 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24307 0 0 1 0 1 Cytosol 0.438718592995098 0.438718592994485 0.4725254 0 hPsi_site_18031 iPseU_CNN:0.4725254;iRNA_PseU:0 18032 chr16 29816329 29816329 1 + C A SKCM 29816328 + 29816308 29816348 41 AATCGTGGGCTGGCGGGAGCTCCACGGCCCCTTCAGCCAGG AATCGTGGGCTGGCGGGAGCTACACGGCCCCTTCAGCCAGG < 41bp 0.487112085648928 0.839481180076975 0.24877739 0.50007546 prediction 0.678962360153949 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29816328 chr16:29816329 synonymous SNV . 0 22 hPsi_associated_SNPs_24308 0 0 1 0 1 Cytosol 0.438718599121665 0.438719227557951 0.000150920000000054 0 hPsi_site_18032 iPseU_CNN:0.000150920000000054;iRNA_PseU:0 18033 chr12 31250894 31250894 1 + G A GBM 31250893 + 31250873 31250913 41 TTGCCCAAGTGGTGAAGGAATGCCGGGCAGTGGTCATTGCG TTGCCCAAGTGGTGAAGGAATACCGGGCAGTGGTCATTGCG < 41bp 0.441925878306005 0.839479617631462 0.28440243 0.5680971 prediction 0.678959235262924 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31250893 chr12:31250894 nonsynonymous SNV 0.189 4 22 hPsi_associated_SNPs_24309 0 0 1 1 2 Cytosol 0.438718578047372 0.438711416651046 0.1361942 0 hPsi_site_18033 iPseU_CNN:0.1361942;iRNA_PseU:0 18034 chr7 17373647 17373647 1 + C A BLCA 17373646 + 17373626 17373666 41 TTTGCGATAGCTACTCCACTTCAGCCACCATCCATACTTGA TTTGCGATAGCTACTCCACTTAAGCCACCATCCATACTTGA < 41bp 0.49047673671486 0.839477943430272 0.31373858 0.41877964 prediction 0.678955886860543 Functional Gain - AHR ENSG00000106546 CDS Human protein_coding chr7:17373646 chr7:17373647 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24310 0 0 1 1 1 Endoplasmic reticulum 0.43947647159736 0.438725001634551 0 0 hPsi_site_18034 iPseU_CNN:0;iRNA_PseU:0 18035 chr2 179641959 179641959 1 + G A SARC 179641958 + 179641938 179641978 41 GTTGGGGTTACCCGTAGCTCTGACTTTCATTTCAAGTCGGG GTTGGGGTTACCCGTAGCTCTAACTTTCATTTCAAGTCGGG < 41bp 0.471117959290744 0.8394751740044 0.16048834 0.3044817 prediction 0.6789503480088 Functional Gain - TTN ENSG00000155657 CDS Human protein_coding chr2:179641958 chr2:179641959 synonymous SNV . 0 22 hPsi_associated_SNPs_24311 0 0 0 0 0 Nucleus 0.438669318073286 0.438718626343266 0 0 hPsi_site_18035 iPseU_CNN:0;iRNA_PseU:0 18036 chr18 61234154 61234154 1 + G A UCEC 61234153 + 61234133 61234173 41 AAGGTCACTACGATCTTGGGTGGAGTTTAATGCCAACCACC AAGGTCACTACGATCTTGGGTAGAGTTTAATGCCAACCACC < 41bp 0.543089406011239 0.882563740653774 0.3545869 0.60130906 prediction 0.67894866928507 Functional Gain - SERPINB12 ENSG00000166634 CDS Human protein_coding chr18:61234153 chr18:61234154 synonymous SNV . 0 22 hPsi_associated_SNPs_24312 0 0 0 0 0 exosome 0.43871866681483 0.438714489372449 0.20261812 0 hPsi_site_18036 iPseU_CNN:0.20261812;iRNA_PseU:0 18037 chr2 71742825 71742825 1 + G A UCEC 71742824 + 71742804 71742844 41 CCTGTGGTCAAGGTTACCGCTGCAGGGCAGACCAAGCGGAC CCTGTGGTCAAGGTTACCGCTACAGGGCAGACCAAGCGGAC < 41bp 0.487060746319505 0.839469833465406 0.293024 0.44038185 prediction 0.678939666930811 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71742824 chr2:71742825 nonsynonymous SNV 0.981 5 22 hPsi_associated_SNPs_24313 0 0 0 0 2 Nucleus 0.438717985353674 0.438719162265517 0 0 hPsi_site_18037 iPseU_CNN:0;iRNA_PseU:0 18038 chr19 6374273 6374273 1 + C A SKCM 6374272 + 6374252 6374292 41 GTCAGAAGCCAGCCGGGCCATCCTGCAGCGCGTGCAGGCGG GTCAGAAGCCAGCCGGGCCATACTGCAGCGCGTGCAGGCGG < 41bp 0.477240962561791 0.839466269351235 0.2730769 0.59427744 prediction 0.67893253870247 Functional Gain - ALKBH7 ENSG00000125652 CDS Human protein_coding chr19:6374272 chr19:6374273 synonymous SNV . 0 22 hPsi_associated_SNPs_24314 0 0 1 0 1 Ribosome 0.438716955583084 0.438672692086442 0.18855488 0 hPsi_site_18038 iPseU_CNN:0.18855488;iRNA_PseU:0 18039 chr6 26505371 26505371 1 + G A UCEC 26505370 + 26505350 26505390 41 AGAGACACTTCTGCGAAAAATGTGTCCTGCTACATCCAGAA AGAGACACTTCTGCGAAAAATATGTCCTGCTACATCCAGAA < 41bp 0.450247482183885 0.839456761172273 0.29286474 0.3164599 prediction 0.678913522344545 Functional Gain - BTN1A1 ENSG00000124557 CDS Human protein_coding chr6:26505370 chr6:26505371 nonsynonymous SNV 0.199 0 22 hPsi_associated_SNPs_24315 0 0 0 0 1 nucleoplasm 0.438718291334375 0.438718691379803 0 0 hPsi_site_18039 iPseU_CNN:0;iRNA_PseU:0 18040 chr15 102346736 102346736 1 + G A GBM 102346735 + 102346715 102346755 41 TCACATCTTGATAAATTCCTTGCCATCTTTGATGCAGTTAT TCACATCTTGATAAATTCCTTACCATCTTTGATGCAGTTAT < 41bp 0.49620265416877 0.83945615002221 0.22004166 0.25204927 prediction 0.67891230004442 Functional Gain - OR4F6 ENSG00000184140 CDS Human protein_coding chr15:102346735 chr15:102346736 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24316 0 0 0 0 0 unknown 0.438718534156122 0.438759592497918 0 0 hPsi_site_18040 iPseU_CNN:0;iRNA_PseU:0 18041 chr10 99337638 99337638 1 + G A COAD 99337637 + 99337617 99337657 41 AAGCACCACGGGGCTCAGAGTGCAGCCCTGCAGAAGGTGAA AAGCACCACGGGGCTCAGAGTACAGCCCTGCAGAAGGTGAA < 41bp 0.55631853748157 0.895770129452921 0.27882957 0.34808573 prediction 0.678903183942702 Functional Gain - ANKRD2 ENSG00000165887 CDS Human protein_coding chr10:99337637 chr10:99337638 nonsynonymous SNV 0.128 0 22 hPsi_associated_SNPs_24317 0 0 0 0 2 exosome 0.438695452668334 0.438733473507751 0 0 hPsi_site_18041 iPseU_CNN:0;iRNA_PseU:0 18042 chr3 119109663 119109663 1 + G A UCEC 119109662 + 119109642 119109682 41 CATCATGAAGAGCCTGACCTTGCCAGCCCTCTCCCTGCCCA CATCATGAAGAGCCTGACCTTACCAGCCCTCTCCCTGCCCA < 41bp 0.426479398040038 0.839450539966174 0.26330104 0.49649587 prediction 0.678901079932348 Functional Gain - ARHGAP31 ENSG00000031081 CDS Human protein_coding chr3:119109662 chr3:119109663 synonymous SNV . 0 22 hPsi_associated_SNPs_24318 0 0 0 0 1 cytosol 0.438719114194333 0.43879832793583 0 0 hPsi_site_18042 iPseU_CNN:0;iRNA_PseU:0 18043 chr6 43473683 43473683 1 + G A rs188240163 43473682 + 43473662 43473702 41 GGGTCCCCAGTCCAAGCCCTTGACCTCTCCTCTATCCAGAC GGGTCCCCAGTCCAAGCCCTTAACCTCTCCTCTATCCAGAC < 41bp 0.529869055180356 0.869316312350293 0.2970631 0.4672671 prediction 0.678894514339873 Functional Gain - TJAP1 ENSG00000137221 UTR3 Human protein_coding chr6:43473682 chr6:43473683 . . 0 22 hPsi_associated_SNPs_24319 0 0 1 0 0 chromatin 0.438719250103947 0.438718592995037 0 0 hPsi_site_18043 iPseU_CNN:0;iRNA_PseU:0 18044 chr3 43389307 43389307 1 + C T LUAD 43389308 - 43389288 43389328 41 TAGCGTTTGTGAACTGTACCTGGAGAAGCTATATTCATCTT TAGCGTTTGTGAACTGTACCTAGAGAAGCTATATTCATCTT < 41bp 0.463067056140987 0.839443436732344 0.29838145 0.4398572 prediction 0.678886873464687 Functional Gain - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389308 chr3:43389307 nonsynonymous SNV 0.009 3 22 hPsi_associated_SNPs_24320 0 0 0 0 0 Cytosol 0.438718592787184 0.438712755981773 0 0 hPsi_site_18044 iPseU_CNN:0;iRNA_PseU:0 18045 chr10 95557468 95557468 1 + G A BRCA 95557467 + 95557447 95557487 41 GCACCAAGATCATTCACACATGTGTCCATTAATAAGCGTAA GCACCAAGATCATTCACACATATGTCCATTAATAAGCGTAA < 41bp 0.462819503195263 0.83944178313522 0.21382982 0.2598124 prediction 0.67888356627044 Functional Gain - LGI1 ENSG00000108231 CDS Human protein_coding chr10:95557467 chr10:95557468 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_24321 0 0 0 2 0 exosome 0.439607201380106 0.439425067313443 0 0 hPsi_site_18045 iPseU_CNN:0;iRNA_PseU:0 18046 chr20 30154016 30154016 1 + G A ESCA 30154015 + 30153995 30154035 41 GCCTGTGTCCTCTCATAGCCTGCCCTCCTATACCTGGTCCC GCCTGTGTCCTCTCATAGCCTACCCTCCTATACCTGGTCCC < 41bp 0.548010518696172 0.88745142715276 0.2986984 0.34951425 prediction 0.678881816913176 Functional Gain - HM13 ENSG00000101294 CDS Human protein_coding chr20:30154015 chr20:30154016 nonsynonymous SNV 0.750 4 22 hPsi_associated_SNPs_24322 0 0 1 0 2 Ribosome 0.438718008568332 0.438719969353651 0 0 hPsi_site_18046 iPseU_CNN:0;iRNA_PseU:0 18047 chr11 70281143 70281143 1 + G A BLCA 70281142 + 70281122 70281162 41 TCTTCCCCAGCGGGCGATGATGAGATCTCATTTGACCCTGA TCTTCCCCAGCGGGCGATGATAAGATCTCATTTGACCCTGA < 41bp 0.547298550662088 0.886735734436583 0.20356789 0.23106906 prediction 0.67887436754899 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281142 chr11:70281143 nonsynonymous SNV 0.960 4 22 hPsi_associated_SNPs_24323 0 0 1 0 2 Ribosome 0.438718564690141 0.438718592138331 0 0 hPsi_site_18047 iPseU_CNN:0;iRNA_PseU:0 18048 chr22 32756646 32756646 1 + G A UCEC 32756645 + 32756625 32756665 41 CAGAACGTTTCCTTTTTTGATGCTGAAAGTGGTTCCCATGT CAGAACGTTTCCTTTTTTGATACTGAAAGTGGTTCCCATGT < 41bp 0.445904117690627 0.839430858918129 0.26032534 0.32842866 prediction 0.678861717836258 Functional Gain - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32756645 chr22:32756646 nonsynonymous SNV 0.019 1 22 hPsi_associated_SNPs_24324 0 0 0 0 0 exosome 0.438398118503906 0.438698609517908 0 0 hPsi_site_18048 iPseU_CNN:0;iRNA_PseU:0 18049 chr7 141463994 141463994 1 + G A rs140781608 141463993 + 141463973 141464013 41 CGAGGGGGTGTTCCTGATTCTGTCTGGCACTCAGTTCACAC CGAGGGGGTGTTCCTGATTCTATCTGGCACTCAGTTCACAC < 41bp 0.529193485222596 0.8686236460352 0.2228803 0.4264224 prediction 0.678860321625208 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141463993 chr7:141463994 synonymous SNV . 0 22 hPsi_associated_SNPs_24325 0 0 1 0 0 exosome 0.438735859075198 0.438724332507932 0 0 hPsi_site_18049 iPseU_CNN:0;iRNA_PseU:0 18050 chr1 156594147 156594147 1 + G A COAD 156594146 + 156594126 156594166 41 TCCCCGCCACCCCCTAGGTGTGGTGTTTCCGTACCAACCCA TCCCCGCCACCCCCTAGGTGTAGTGTTTCCGTACCAACCCA < 41bp 0.44110677773076 0.83941896045012 0.28535378 0.6486578 prediction 0.67883792090024 Functional Gain - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594146 chr1:156594147 synonymous SNV . 0 22 hPsi_associated_SNPs_24326 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0.2973156 0 hPsi_site_18050 iPseU_CNN:0.2973156;iRNA_PseU:0 18051 chr6 84233421 84233421 1 + C A UCEC 84233420 + 84233400 84233440 41 TTATCTTTCCTATGAGACTGTCTTTGAGAATGGCACCCGAA TTATCTTTCCTATGAGACTGTATTTGAGAATGGCACCCGAA < 41bp 0.482848266774127 0.839410945617813 0.27472645 0.7558907 prediction 0.678821891235625 Functional Gain - PRSS35 ENSG00000146250 CDS Human protein_coding chr6:84233420 chr6:84233421 synonymous SNV . 0 22 hPsi_associated_SNPs_24327 0 0 0 0 0 exosome 0.43871998586987 0.438713122871878 0.5117814 0 hPsi_site_18051 iPseU_CNN:0.5117814;iRNA_PseU:0 18052 chr12 31244712 31244712 1 + C A LUSC 31244711 + 31244691 31244731 41 CACTCGGCAGGCCGCGGGCATCCGGCTGCAGGACCAGGTGG CACTCGGCAGGCCGCGGGCATACGGCTGCAGGACCAGGTGG < 41bp 0.483535272142787 0.839410236217578 0.16586146 0.28112003 prediction 0.678820472435156 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244711 chr12:31244712 synonymous SNV . 0 22 hPsi_associated_SNPs_24328 0 0 1 0 2 Cytosol 0.438718592995508 0.438718596228832 0 0 hPsi_site_18052 iPseU_CNN:0;iRNA_PseU:0 18053 chr9 91616259 91616259 1 + C A COAD 91616258 + 91616238 91616278 41 CACCACCGTGCTCTTCTTGGTCATCTGCAGCTTCATCGTCT CACCACCGTGCTCTTCTTGGTAATCTGCAGCTTCATCGTCT < 41bp 0.509309829465219 0.848716144791896 0.36152044 0.8872406 prediction 0.678812630653354 Functional Gain - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616258 chr9:91616259 synonymous SNV . 0 22 hPsi_associated_SNPs_24329 0 0 0 0 0 cytosol 0.438710495637832 0.438739514632033 0.7744812 0 hPsi_site_18053 iPseU_CNN:0.7744812;iRNA_PseU:0 18054 chr14 76045679 76045679 1 + G A rs147535419 76045678 + 76045658 76045698 41 TTCTACGGTGTCAGTGCCTTTGCCATTGACTGGCTGTCCAT TTCTACGGTGTCAGTGCCTTTACCATTGACTGGCTGTCCAT < 41bp 0.435869165203302 0.839403499077302 0.23921329 0.38417643 prediction 0.678806998154604 Functional Gain - FLVCR2 ENSG00000119686 CDS Human protein_coding chr14:76045678 chr14:76045679 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24330 0 0 0 0 0 Cytosol 0.438717667549902 0.438729233924389 0 0 hPsi_site_18054 iPseU_CNN:0;iRNA_PseU:0 18055 chr22 45210624 45210624 1 + G A CESC 45210623 + 45210603 45210643 41 CAAGGTCCTGTGGAACATCTTGAAGCCCCTCATCAGGTATG CAAGGTCCTGTGGAACATCTTAAAGCCCCTCATCAGGTATG < 41bp 0.427207754919262 0.839400389370061 0.2816684 0.60064167 prediction 0.678800778740122 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45210623 chr22:45210624 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_24331 0 0 0 1 2 unknown 0.438718575235393 0.438718592475245 0.20128334 0 hPsi_site_18055 iPseU_CNN:0.20128334;iRNA_PseU:0 18056 chr3 87146967 87146967 1 + G A rs576649284 87146966 + 87146946 87146986 41 CAGAGGTTTCTGCTGCCTTTTGTTTGCCTATGCCCTGCTCC CAGAGGTTTCTGCTGCCTTTTATTTGCCTATGCCCTGCTCC < 41bp 0.496207598191496 0.839396398907516 0.53411347 0.7708225 prediction 0.678792797815032 Functional Gain - LINC00506 ENSG00000241293;ENSG00000264119 intergenic Human other chr3:87146966 chr3:87146967 . . 0 22 hPsi_associated_SNPs_24332 0 0 0 0 0 unknown 0.438756601219075 0.438857916016568 0.47341806 0 hPsi_site_18056 iPseU_CNN:0.47341806;iRNA_PseU:0 18057 chr1 156552116 156552116 1 + G A ESCA 156552115 + 156552095 156552135 41 TGCAGGCCCTGCCCCTGTGCTGGGTGCCAGGAGAGCAGGCC TGCAGGCCCTGCCCCTGTGCTAGGTGCCAGGAGAGCAGGCC < 41bp 0.559669922648142 0.899063770279625 0.24551266 0.549088 prediction 0.678787695262967 Functional Gain - TTC24 ENSG00000187862 CDS Human protein_coding chr1:156552115 chr1:156552116 stopgain 0.597 0 22 hPsi_associated_SNPs_24333 0 0 0 0 1 exosome 0.43871859076918 0.438718279427923 0.098176 0 hPsi_site_18057 iPseU_CNN:0.098176;iRNA_PseU:0 18058 chr11 5068314 5068314 1 + G A LUAD 5068313 + 5068293 5068333 41 TACTGTGAGCACATGGGCATTGCAAAATTGTCCTGTGGAAA TACTGTGAGCACATGGGCATTACAAAATTGTCCTGTGGAAA < 41bp 0.531023554712044 0.87041201875451 0.29891437 0.469761 prediction 0.678776928084932 Functional Gain - OR52J3 ENSG00000205495 CDS Human protein_coding chr11:5068313 chr11:5068314 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_24334 0 0 0 0 0 unknown 0.439294713188963 0.43871949159126 0 0 hPsi_site_18058 iPseU_CNN:0;iRNA_PseU:0 18059 chr11 92714866 92714866 1 + G A UCEC 92714865 + 92714845 92714885 41 CCGGCGCTGGCACACCCCTCTGCACATCTGCCTCATCTGGC CCGGCGCTGGCACACCCCTCTACACATCTGCCTCATCTGGC < 41bp 0.556536042445596 0.895920768451008 0.28854507 0.41932553 prediction 0.678769452010823 Functional Gain - MTNR1B ENSG00000134640 CDS Human protein_coding chr11:92714865 chr11:92714866 synonymous SNV . 0 22 hPsi_associated_SNPs_24335 0 0 0 0 0 unknown 0.438653543482694 0.438705309197407 0 0 hPsi_site_18059 iPseU_CNN:0;iRNA_PseU:0 18060 chr12 97038073 97038073 1 + G A rs145668264 97038072 + 97038052 97038092 41 TCGTCTATCACTTGAAGAGATGCCCTGGAGAGCTCAGATGA TCGTCTATCACTTGAAGAGATACCCTGGAGAGCTCAGATGA < 41bp 0.466451179797987 0.839384235246686 0.21855417 0.3044048 prediction 0.678768470493373 Functional Gain - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:97038072 chr12:97038073 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_24336 0 0 0 0 0 exosome 0.43874235773512 0.438739354007723 0 0 hPsi_site_18060 iPseU_CNN:0;iRNA_PseU:0 18061 chr13 31848749 31848749 1 + C A UCEC 31848748 + 31848728 31848768 41 ACTGTGCTACCACATTCCATTCTTTTCTACCGCTTTGTGTG ACTGTGCTACCACATTCCATTATTTTCTACCGCTTTGTGTG < 41bp 0.503697743427455 0.843079360534856 0.23902848 0.27773643 prediction 0.678763234214802 Functional Gain - B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31848748 chr13:31848749 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_24337 0 0 1 0 1 Ribosome 0.438724351809697 0.439253027783976 0 0 hPsi_site_18061 iPseU_CNN:0;iRNA_PseU:0 18062 chr1 158813842 158813842 1 + C A LUAD 158813841 + 158813821 158813861 41 GTCCCTCAGGAGCCAGCACATCTGCAGCTGTGGATCATCCC GTCCCTCAGGAGCCAGCACATATGCAGCTGTGGATCATCCC < 41bp 0.50954033442761 0.848919355461814 0.30051094 0.29839855 prediction 0.678758042068408 Functional Gain - MNDA ENSG00000163563 CDS Human protein_coding chr1:158813841 chr1:158813842 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_24338 0 0 0 0 2 exosome 0.43871817995902 0.438717977997301 0 0 hPsi_site_18062 iPseU_CNN:0;iRNA_PseU:0 18063 chr1 99753577 99753577 1 + C A UCEC 99753576 + 99753556 99753596 41 TTTCCTCGAACTCACAGATGTCTTCAAACCTGTGCACTCTG TTTCCTCGAACTCACAGATGTATTCAAACCTGTGCACTCTG < 41bp 0.489657812473758 0.839366597222975 0.32784843 0.63144726 prediction 0.67873319444595 Functional Gain - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99753576 chr1:99753577 synonymous SNV . 0 22 hPsi_associated_SNPs_24339 0 0 0 0 1 exosome 0.438722585486472 0.438574343547487 0.26289452 0 hPsi_site_18063 iPseU_CNN:0.26289452;iRNA_PseU:0 18064 chr19 56203162 56203162 1 + C A LUSC 56203161 + 56203141 56203181 41 GACGTCTTCACGGCCCCAGCTCCTGCCCCGACCACAGACCC GACGTCTTCACGGCCCCAGCTACTGCCCCGACCACAGACCC < 41bp 0.485339685006238 0.839362159419289 0.33037344 0.7239146 prediction 0.678724318838579 Functional Gain - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56203161 chr19:56203162 nonsynonymous SNV 0.264 0 22 hPsi_associated_SNPs_24340 0 0 1 0 1 chromatin 0.438720803379761 0.438718646742333 0.4478292 0 hPsi_site_18064 iPseU_CNN:0.4478292;iRNA_PseU:0 18065 chr11 61405022 61405022 1 + G A OV 61405021 + 61405001 61405041 41 GCCACCACAGCTGCTCCTGCTGCTGCTGCTGCAGCCCCAGC GCCACCACAGCTGCTCCTGCTACTGCTGCTGCAGCCCCAGC < 41bp 0.448828116822399 0.839355732199668 0.3995339 0.6913537 prediction 0.678711464399335 Functional Gain - RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61405021 chr11:61405022 . . 0 22 hPsi_associated_SNPs_24341 0 0 0 0 0 unknown 0.438666819146652 0.438751588351799 0.3827074 0 hPsi_site_18065 iPseU_CNN:0.3827074;iRNA_PseU:0 18066 chr19 13915898 13915898 1 + G A PAAD 13915897 + 13915877 13915917 41 CGCCCATCACACTGAGGTGCTGCCCACTGCTCAGCGCTTGG CGCCCATCACACTGAGGTGCTACCCACTGCTCAGCGCTTGG < 41bp 0.434320917099717 0.839353656495328 0.22392243 0.6987821 prediction 0.678707312990656 Functional Gain - ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13915897 chr19:13915898 synonymous SNV . 0 22 hPsi_associated_SNPs_24342 0 0 0 0 1 chromatin 0.438716970013776 0.438187271989286 0.3975642 0 hPsi_site_18066 iPseU_CNN:0.3975642;iRNA_PseU:0 18067 chr10 95660752 95660752 1 + G A BRCA 95660751 + 95660731 95660771 41 CACTGGAGTGATCCTTATCGTGAGACCACCATTTTTGTTTG CACTGGAGTGATCCTTATCGTAAGACCACCATTTTTGTTTG < 41bp 0.44446049212453 0.839353329606178 0.17360261 0.2882028 prediction 0.678706659212356 Functional Gain - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660751 chr10:95660752 synonymous SNV . 0 22 hPsi_associated_SNPs_24343 0 0 1 0 0 exosome 0.438739700851792 0.438749748064385 0 0 hPsi_site_18067 iPseU_CNN:0;iRNA_PseU:0 18068 chr6 107956585 107956585 1 + C A UCEC 107956584 + 107956564 107956604 41 CCATGGCACCGTGCATCATCTCCTCGCCCATGCTCAGCGCC CCATGGCACCGTGCATCATCTACTCGCCCATGCTCAGCGCC < 41bp 0.493536883181755 0.83934621543345 0.16838896 0.7038949 prediction 0.678692430866899 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107956584 chr6:107956585 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_24344 0 0 0 0 1 cytosol 0.438718745226988 0.438408943610573 0.4077898 0 hPsi_site_18068 iPseU_CNN:0.4077898;iRNA_PseU:0 18069 chr19 36363479 36363479 1 + G A SKCM 36363478 + 36363458 36363498 41 GGGGTTCCTGAGGGCCAAGATGGACCTGGAGGAGCGTAGGA GGGGTTCCTGAGGGCCAAGATAGACCTGGAGGAGCGTAGGA < 41bp 0.427150285046469 0.839338404389035 0.18473211 0.23800334 prediction 0.678676808778071 Functional Gain - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36363478 chr19:36363479 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24345 0 0 0 0 2 Endoplasmic reticulum 0.438718592992016 0.438718592995102 0 0 hPsi_site_18069 iPseU_CNN:0;iRNA_PseU:0 18070 chrX 48417377 48417377 1 + G A THYM 48417376 + 48417356 48417396 41 AAACGGTCATCACTGACGACTGCCGCCCTGCCCTTTACACA AAACGGTCATCACTGACGACTACCGCCCTGCCCTTTACACA < 41bp 0.436542452511484 0.839337515885639 0.26042992 0.46756876 prediction 0.678675031771278 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48417376 chrX:48417377 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_24346 0 0 1 0 2 nucleolus 0.438695346241298 0.438384483587834 0 0 hPsi_site_18070 iPseU_CNN:0;iRNA_PseU:0 18071 chr3 73111500 73111500 1 + G A rs189439924 73111499 + 73111479 73111519 41 AACAGACAGTATCCACTGGATGCATTGGAACCCCAACCCAG AACAGACAGTATCCACTGGATACATTGGAACCCCAACCCAG < 41bp 0.46862226080053 0.839333868951281 0.2803219 0.7889162 prediction 0.678667737902562 Functional Gain - EBLN2 ENSG00000255423 CDS Human protein_coding chr3:73111499 chr3:73111500 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_24347 0 0 1 0 0 exosome 0.439136151104679 0.439190124692117 0.5778324 0 hPsi_site_18071 iPseU_CNN:0.5778324;iRNA_PseU:0 18072 chr11 65341111 65341111 1 + G A BLCA 65341110 + 65341090 65341130 41 ATGCCTTCCACATCAGCCTCTGAAGGGCTGGGGGGCAGGGG ATGCCTTCCACATCAGCCTCTAAAGGGCTGGGGGGCAGGGG < 41bp 0.547027893795203 0.886357310467985 0.25857472 0.325204 prediction 0.678658833345563 Functional Gain - FAM89B ENSG00000176973 CDS Human protein_coding chr11:65341110 chr11:65341111 synonymous SNV . 0 22 hPsi_associated_SNPs_24348 0 0 1 0 0 Cytosol 0.438718554923665 0.438717866921134 0 0 hPsi_site_18072 iPseU_CNN:0;iRNA_PseU:0 18073 chr18 77464820 77464820 1 + G A GBM 77464819 + 77464799 77464839 41 GCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACT GCCCATGCTGCACACGCGCCTACGTCCACACTGCAAGGACT < 41bp 0.556330556320987 0.895658922941806 0.25945655 0.52300125 prediction 0.678656733241639 Functional Gain - CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77464819 chr18:77464820 synonymous SNV . 0 22 hPsi_associated_SNPs_24349 0 0 0 0 2 chromatin 0.420227896369994 0.435642077488803 0.0460024999999999 0 hPsi_site_18073 iPseU_CNN:0.0460024999999999;iRNA_PseU:0 18074 chr19 58773998 58773998 1 + C A UCEC 58773997 + 58773977 58774017 41 TTTTCAGGGAGCTCTAACCTTCTTTCCCATCACAGAATTCA TTTTCAGGGAGCTCTAACCTTATTTCCCATCACAGAATTCA < 41bp 0.500084627879192 0.839411328630867 0.4149733 0.58920443 prediction 0.67865340150335 Functional Gain - ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773997 chr19:58773998 nonsynonymous SNV 0.891 0 22 hPsi_associated_SNPs_24350 0 0 1 0 0 chromatin 0.438718598598918 0.438718621702139 0.17840886 0 hPsi_site_18074 iPseU_CNN:0.17840886;iRNA_PseU:0 18075 chr2 97483118 97483118 1 + G A BLCA 97483117 + 97483097 97483137 41 CATGCTCTACCTCAAGGACTTGGCCTTCGTGGATCCCGAAG CATGCTCTACCTCAAGGACTTAGCCTTCGTGGATCCCGAAG < 41bp 0.444292926586525 0.83932393035507 0.31740588 0.41010487 prediction 0.678647860710139 Functional Gain - CNNM3 ENSG00000168763 CDS Human protein_coding chr2:97483117 chr2:97483118 synonymous SNV . 0 22 hPsi_associated_SNPs_24351 0 0 1 0 0 Ribosome 0.438718593291844 0.438761579190116 0 0 hPsi_site_18075 iPseU_CNN:0;iRNA_PseU:0 18076 chr3 186760900 186760900 1 + G A UCEC 186760899 + 186760879 186760919 41 GGACCAGGCATCAAGTTCAGTGCAGAGGCCCTGCGCTGCCA GGACCAGGCATCAAGTTCAGTACAGAGGCCCTGCGCTGCCA < 41bp 0.431390837954239 0.839317543890037 0.23261306 0.4082667 prediction 0.678635087780074 Functional Gain - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186760899 chr3:186760900 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_24352 0 0 1 0 0 Ribosome 0.437796555244831 0.43800445842548 0 0 hPsi_site_18076 iPseU_CNN:0;iRNA_PseU:0 18077 chr17 40129310 40129310 1 + G T COAD 40129311 - 40129291 40129331 41 AAACAATATCTTCAAGGCATTCTTTGGCGGTCCTGGCGGCT AAACAATATCTTCAAGGCATTATTTGGCGGTCCTGGCGGCT < 41bp 0.515581230191339 0.854898374770648 0.19431627 0.3143015 prediction 0.678634289158619 Functional Gain - DNAJC7 ENSG00000168259 CDS Human protein_coding chr17:40129311 chr17:40129310 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_24353 0 0 1 0 2 Ribosome 0.438718592835863 0.438718593533685 0 0 hPsi_site_18077 iPseU_CNN:0;iRNA_PseU:0 18078 chr5 78964764 78964764 1 + G A rs567364453 78964763 + 78964743 78964783 41 ACCTTGTACATCAAGCTCCATGTAATGTTCCTCCTTACCTC ACCTTGTACATCAAGCTCCATATAATGTTCCTCCTTACCTC < 41bp 0.440410771141052 0.839316380534583 0.165544 0.21707112 prediction 0.678632761069167 Functional Gain - PAPD4 ENSG00000164329 CDS Human protein_coding chr5:78964763 chr5:78964764 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_24354 0 0 1 0 2 Ribosome 0.438718595326853 0.438718592867148 0 0 hPsi_site_18078 iPseU_CNN:0;iRNA_PseU:0 18079 chr3 113122856 113122856 1 + G A LUAD 113122855 + 113122835 113122875 41 ATGTTGCCCCATTCTGACCCTGAGAGCACCTGGCAGGTATG ATGTTGCCCCATTCTGACCCTAAGAGCACCTGGCAGGTATG < 41bp 0.469972464907847 0.839311013583294 0.17196694 0.22912121 prediction 0.678622027166588 Functional Gain - CFAP44 ENSG00000206530 CDS Human protein_coding chr3:113122855 chr3:113122856 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_24355 0 0 0 0 1 cytosol 0.438718816318217 0.43872673207019 0 0 hPsi_site_18079 iPseU_CNN:0;iRNA_PseU:0 18080 chr4 89304481 89304481 1 + C A UCEC 89304480 + 89304460 89304500 41 TCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGCTGGGGATT TCTTCGCATGGGGAGCTGGTTATGAAGGGCAGCTGGGGATT < 41bp 0.511776079570313 0.851077646608108 0.30781537 0.36927408 prediction 0.678603134075591 Functional Gain - HERC6 ENSG00000138642 CDS Human protein_coding chr4:89304480 chr4:89304481 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24356 0 0 0 0 1 Cytosol 0.438717546815897 0.43874663890158 0 0 hPsi_site_18080 iPseU_CNN:0;iRNA_PseU:0 18081 chr5 102611912 102611912 1 + G A LUAD 102611911 + 102611891 102611931 41 TTACGCTCCAAACAGCTAGATGCAGGACTTGCCCGTTCCTC TTACGCTCCAAACAGCTAGATACAGGACTTGCCCGTTCCTC < 41bp 0.551357250020387 0.890652994827607 0.2788086 0.90363085 prediction 0.678591489614441 Functional Gain - C5orf30 ENSG00000181751 CDS Human protein_coding chr5:102611911 chr5:102611912 nonsynonymous SNV 0.243 0 22 hPsi_associated_SNPs_24357 0 0 1 0 0 Nucleus 0.438718585655945 0.438718565021319 0.8072617 0 hPsi_site_18081 iPseU_CNN:0.8072617;iRNA_PseU:0 18082 chr2 69049734 69049734 1 + C A UCEC 69049733 + 69049713 69049753 41 AAGGGCACAGGAGAACGATGTCTCAAGACTTGCGCCAACTT AAGGGCACAGGAGAACGATGTATCAAGACTTGCGCCAACTT < 41bp 0.468695404066581 0.83929461243195 0.5812609 0.7754643 prediction 0.6785892248639 Functional Gain - ARHGAP25 ENSG00000163219 CDS Human protein_coding chr2:69049733 chr2:69049734 nonsynonymous SNV 0.841 4 22 hPsi_associated_SNPs_24358 0 0 0 0 0 chromatin 0.438733871013667 0.438755761004832 0.3884068 0 hPsi_site_18082 iPseU_CNN:0.3884068;iRNA_PseU:0 18083 chr1 177245471 177245471 1 + G A SKCM 177245470 + 177245450 177245490 41 AAGTGCAGCCCCACCTTCCCTGAATGCAACTGCCCTGATGC AAGTGCAGCCCCACCTTCCCTAAATGCAACTGCCCTGATGC < 41bp 0.428425341442553 0.839290380023645 0.39680716 0.7586601 prediction 0.678580760047289 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177245470 chr1:177245471 nonsynonymous SNV 0.959 2 22 hPsi_associated_SNPs_24359 0 0 0 0 1 Nucleus 0.438718749206051 0.438718594990631 0.5173202 0 hPsi_site_18083 iPseU_CNN:0.5173202;iRNA_PseU:0 18084 chr11 61563334 61563334 1 + G A CESC 61563333 + 61563313 61563353 41 GGCCAGCTGTGCTGCCCTGGTGAAGGCTGGCAAAGTCTATG GGCCAGCTGTGCTGCCCTGGTAAAGGCTGGCAAAGTCTATG < 41bp 0.55793731923961 0.897222825157182 0.23704425 0.61147934 prediction 0.678571011835144 Functional Gain - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563333 chr11:61563334 synonymous SNV . 0 22 hPsi_associated_SNPs_24360 0 0 1 0 0 Cytosol 0.438706823449749 0.438729950809013 0.22295868 0 hPsi_site_18084 iPseU_CNN:0.22295868;iRNA_PseU:0 18085 chr8 145729777 145729777 1 + G A rs140901015 145729776 + 145729756 145729796 41 GGACGGCATGAACCCGCGTGTGCGGAGAGTGGAGTACGCAG GGACGGCATGAACCCGCGTGTACGGAGAGTGGAGTACGCAG < 41bp 0.53900543448506 0.878289708255581 0.2806123 0.38914144 prediction 0.678568547541043 Functional Gain - GPT ENSG00000167701 CDS Human protein_coding chr8:145729776 chr8:145729777 synonymous SNV . 0 22 hPsi_associated_SNPs_24361 0 0 0 0 1 Cytosol 0.438718393655086 0.43870654208787 0 0 hPsi_site_18085 iPseU_CNN:0;iRNA_PseU:0 18086 chr2 220440019 220440019 1 + G A COAD 220440018 + 220439998 220440038 41 CCAGTTTCATCTTCCACTACTGTCATGGTGGTTGTGGGCTG CCAGTTTCATCTTCCACTACTATCATGGTGGTTGTGGGCTG < 41bp 0.449742052926247 0.839270820187421 0.3254665 0.3789291 prediction 0.678541640374843 Functional Gain - INHA ENSG00000123999 CDS Human protein_coding chr2:220440018 chr2:220440019 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_24362 0 0 0 0 0 cytosol 0.438718733918066 0.438718483676977 0 0 hPsi_site_18086 iPseU_CNN:0;iRNA_PseU:0 18087 chr18 10548993 10548993 1 + G A GBM 10548992 + 10548972 10549012 41 GGTTCAATGGCAGTGAAGACTGTGCTGCCCTGGAACAGCTT GGTTCAATGGCAGTGAAGACTATGCTGCCCTGGAACAGCTT < 41bp 0.438933315874109 0.8392670942652 0.28868538 0.2724638 prediction 0.678534188530399 Functional Gain - NAPG ENSG00000134265 CDS Human protein_coding chr18:10548992 chr18:10548993 nonsynonymous SNV 0.861 1 22 hPsi_associated_SNPs_24363 0 0 1 0 1 Cytosol 0.439064902603945 0.438342391484255 0 0 hPsi_site_18087 iPseU_CNN:0;iRNA_PseU:0 18088 chr10 43613843 43613843 1 + G A rs1800861 43613842 + 43613822 43613862 41 GAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGTCAGAGT GAACGCCTCCCCGAGTGAGCTACGAGACCTGCTGTCAGAGT < 41bp 0.423299500698807 0.839259298267182 0.3503735 0.77816314 prediction 0.678518596534365 Functional Gain - RET ENSG00000165731 CDS Human protein_coding chr10:43613842 chr10:43613843 synonymous SNV . 0 22 hPsi_associated_SNPs_24364 3 0 0 0 2 Cytosol 0.438714339128618 0.438670709018145 0.55632628 0 hPsi_site_18088 iPseU_CNN:0.55632628;iRNA_PseU:0 18089 chr14 20296510 20296510 1 + G A rs10149365 20296509 + 20296489 20296529 41 GAAAGCTTCCATGAAAAAGGTGTTTAATAAGCACATAGCCT GAAAGCTTCCATGAAAAAGGTATTTAATAAGCACATAGCCT < 41bp 0.513994558043651 0.853252502786852 0.26883224 0.4476109 prediction 0.678515889486402 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20296509 chr14:20296510 synonymous SNV . 0 22 hPsi_associated_SNPs_24365 0 0 0 0 0 unknown 0.438718592998821 0.438718592994371 0 0 hPsi_site_18089 iPseU_CNN:0;iRNA_PseU:0 18090 chr5 140573450 140573450 1 + C A LUAD 140573449 + 140573429 140573469 41 ACAACATAACGGTCCTGGTCTCCGACGTCAATGACAACGCC ACAACATAACGGTCCTGGTCTACGACGTCAATGACAACGCC < 41bp 0.501057107072958 0.84031319852272 0.2977574 0.6297977 prediction 0.678512182899524 Functional Gain - PCDHB10 ENSG00000120324 CDS Human protein_coding chr5:140573449 chr5:140573450 nonsynonymous SNV 0.243 3 22 hPsi_associated_SNPs_24366 0 0 0 0 0 exosome 0.438718726954126 0.438717520725954 0.2595954 0 hPsi_site_18090 iPseU_CNN:0.2595954;iRNA_PseU:0 18091 chr12 52314580 52314580 1 + G A BLCA 52314579 + 52314559 52314599 41 CTCAGATGATGCGGGAGTGCTGGTACCCAAACCCCTCTGCC CTCAGATGATGCGGGAGTGCTAGTACCCAAACCCCTCTGCC < 41bp 0.440962371683993 0.839253937452299 0.23303336 0.4217343 prediction 0.678507874904598 Functional Gain - ACVRL1 ENSG00000139567 CDS Human protein_coding chr12:52314579 chr12:52314580 stopgain 1.000 0 22 hPsi_associated_SNPs_24367 0 0 0 0 1 Endoplasmic reticulum 0.438708274916387 0.438718602218536 0 0 hPsi_site_18091 iPseU_CNN:0;iRNA_PseU:0 18092 chr7 129909595 129909595 1 + C A UCEC 129909594 + 129909574 129909614 41 CGTCCAGGCAGTCAAAGTGTTCTTGGAGTCCCAGGGAATTG CGTCCAGGCAGTCAAAGTGTTATTGGAGTCCCAGGGAATTG < 41bp 0.47401402371684 0.839245935997619 0.33960623 0.6300952 prediction 0.678491871995238 Functional Gain - CPA2 ENSG00000158516 CDS Human protein_coding chr7:129909594 chr7:129909595 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_24368 0 0 0 0 2 exosome 0.438723682978422 0.43854313476721 0.2601904 0 hPsi_site_18092 iPseU_CNN:0.2601904;iRNA_PseU:0 18093 chr18 77624219 77624219 1 + G A LGG 77624218 + 77624198 77624238 41 GCTCTTCGCCTGCGTGTCCGTGTCCTTCGTGGCCGTCACGG GCTCTTCGCCTGCGTGTCCGTATCCTTCGTGGCCGTCACGG < 41bp 0.46330336635702 0.839245780907678 0.44446433 0.6151812 prediction 0.678491561815356 Functional Gain - KCNG2 ENSG00000178342 CDS Human protein_coding chr18:77624218 chr18:77624219 synonymous SNV . 0 22 hPsi_associated_SNPs_24369 0 0 0 0 1 exosome 0.438741687897359 0.43869006509152 0.2303624 0 hPsi_site_18093 iPseU_CNN:0.2303624;iRNA_PseU:0 18094 chr4 4322918 4322918 1 + G A BLCA 4322917 + 4322897 4322937 41 GCTTTGGACAACCACGGCGGTGACCCCCTGGGCAGTCGAGC GCTTTGGACAACCACGGCGGTAACCCCCTGGGCAGTCGAGC < 41bp 0.429079964123914 0.839242534696363 0.2393629 0.50762624 prediction 0.678485069392726 Functional Gain - ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4322917 chr4:4322918 nonsynonymous SNV 0.121 1 22 hPsi_associated_SNPs_24370 0 0 0 0 0 nucleoplasm 0.438718556689119 0.43870542909115 0.01525248 0 hPsi_site_18094 iPseU_CNN:0.01525248;iRNA_PseU:0 18095 chr2 100007118 100007118 1 + C A OV 100007117 + 100007097 100007137 41 GTAGAAGGGCCCATTGTAACTCAGATTCGAGGCCTCCTGTT GTAGAAGGGCCCATTGTAACTAAGATTCGAGGCCTCCTGTT < 41bp 0.508183959108865 0.847423976215359 0.19525898 0.3301687 prediction 0.678480034212987 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:100007117 chr2:100007118 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24371 0 0 1 0 1 Ribosome 0.438718591109545 0.438718563540828 0 0 hPsi_site_18095 iPseU_CNN:0;iRNA_PseU:0 18096 chr1 209782363 209782363 1 + C A UCEC 209782362 + 209782342 209782382 41 CATTCTATGAAGAAACGGAGTCTAAGCTTTTCGAGAAGATC CATTCTATGAAGAAACGGAGTATAAGCTTTTCGAGAAGATC < 41bp 0.489231456349459 0.839237341781266 0.6965231 0.6730913 prediction 0.678474683562532 Functional Gain - CAMK1G ENSG00000008118 CDS Human protein_coding chr1:209782362 chr1:209782363 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_24372 0 0 0 0 2 exosome 0.438718450512583 0.438718889315139 0 0 hPsi_site_18096 iPseU_CNN:0;iRNA_PseU:0 18097 chr6 26184080 26184080 1 + G A COAD 26184079 + 26184059 26184099 41 GAAGGGCTCCAAGAAGGCCGTGACCAAGGCGCAGAAGAAGG GAAGGGCTCCAAGAAGGCCGTAACCAAGGCGCAGAAGAAGG < 41bp 0.526592176101266 0.865829381003858 0.21827218 0.46154454 prediction 0.678474409805185 Functional Gain - HIST1H2BE ENSG00000197697 CDS Human other chr6:26184079 chr6:26184080 synonymous SNV . 0 22 hPsi_associated_SNPs_24373 0 0 0 0 0 nucleoplasm 0.438718592995102 0.438718592995102 0 0 hPsi_site_18097 iPseU_CNN:0;iRNA_PseU:0 18098 chr4 89397124 89397124 1 + G A UCEC 89397123 + 89397103 89397143 41 TCCAACAACTGGGAGAGCCTTGTGGTTCCATTTGCAAAGGT TCCAACAACTGGGAGAGCCTTATGGTTCCATTTGCAAAGGT < 41bp 0.55353960576372 0.892776221328061 0.34917468 0.5484558 prediction 0.678473231128683 Functional Gain - HERC5 ENSG00000138646 CDS Human protein_coding chr4:89397123 chr4:89397124 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_24374 0 0 0 0 1 exosome 0.438718594611309 0.438718593399262 0.0969116000000001 0 hPsi_site_18098 iPseU_CNN:0.0969116000000001;iRNA_PseU:0 18099 chr7 4830194 4830194 1 + G A rs557706442 4830193 + 4830173 4830213 41 TGGGCAGCGTGAATGGTCTCTGCAGCAGGGCGAGCCTCGTC TGGGCAGCGTGAATGGTCTCTACAGCAGGGCGAGCCTCGTC < 41bp 0.442730566911336 0.839234956147092 0.35558027 0.5763051 prediction 0.678469912294184 Functional Gain - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830193 chr7:4830194 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24375 0 0 1 0 1 chromatin 0.438435404640469 0.437217981002077 0.1526102 0 hPsi_site_18099 iPseU_CNN:0.1526102;iRNA_PseU:0 18100 chr13 28498407 28498407 1 + G A UCEC 28498406 + 28498386 28498426 41 CCCGCAGGCGGCGCCTACGCTGCGGAGCCGGAGGAGAACAA CCCGCAGGCGGCGCCTACGCTACGGAGCCGGAGGAGAACAA < 41bp 0.447673472701363 0.839232727669024 0.641312 0.7758014 prediction 0.678465455338049 Functional Gain - PDX1 ENSG00000139515 CDS Human protein_coding chr13:28498406 chr13:28498407 nonsynonymous SNV 0.016 2 22 hPsi_associated_SNPs_24376 0 0 0 0 1 exosome 0.438718591889758 0.438718593345829 0.2689788 0 hPsi_site_18100 iPseU_CNN:0.2689788;iRNA_PseU:0 18101 chr12 7343064 7343064 1 + C A LUAD 7343063 + 7343043 7343083 41 TTCACCCAGGACAAGGCCCTTCGGCAGGAGGGATTGAGGCC TTCACCCAGGACAAGGCCCTTAGGCAGGAGGGATTGAGGCC < 41bp 0.508796336977173 0.848027587933402 0.20483553 0.24527341 prediction 0.678462501912457 Functional Gain - PEX5 ENSG00000139197 CDS Human protein_coding chr12:7343063 chr12:7343064 synonymous SNV . 0 22 hPsi_associated_SNPs_24377 0 0 1 0 1 Ribosome 0.438718592992189 0.438718592995102 0 0 hPsi_site_18101 iPseU_CNN:0;iRNA_PseU:0 18102 chr1 196928109 196928109 1 + G A SKCM 196928108 + 196928088 196928128 41 TCAAGAACAGGTGACATAGTTGAATTTGTTTGTAAATCTGG TCAAGAACAGGTGACATAGTTAAATTTGTTTGTAAATCTGG < 41bp 0.517376790232373 0.856579921085518 0.30182758 0.5974395 prediction 0.678406261706289 Functional Gain - CFHR2 ENSG00000080910 CDS Human protein_coding chr1:196928108 chr1:196928109 nonsynonymous SNV 0.011 3 22 hPsi_associated_SNPs_24378 0 0 0 0 1 exosome 0.438835614963181 0.438719179097058 0.194879 0 hPsi_site_18102 iPseU_CNN:0.194879;iRNA_PseU:0 18103 chr11 44076808 44076808 1 + C A rs187630793 44076807 + 44076787 44076827 41 TGCTGTCTGTGTTTGATGAATCCATCACATTCCACAGCATT TGCTGTCTGTGTTTGATGAATACATCACATTCCACAGCATT < 41bp 0.490142460680651 0.83919633695471 0.2702033 0.4639495 prediction 0.678392673909419 Functional Gain - ACCSL ENSG00000205126 CDS Human protein_coding chr11:44076807 chr11:44076808 nonsynonymous SNV 0.370 4 22 hPsi_associated_SNPs_24379 0 0 0 0 2 Exosome 0.438714063577563 0.438635317673617 0 0 hPsi_site_18103 iPseU_CNN:0;iRNA_PseU:0 18104 chr10 98080466 98080466 1 + C A UCEC 98080465 + 98080445 98080485 41 GAGCAGCTTCTGTATTGAAATCTCTGCCATTCACAATCATC GAGCAGCTTCTGTATTGAAATATCTGCCATTCACAATCATC < 41bp 0.487438456693289 0.839195405241871 0.34300536 0.636515 prediction 0.678390810483742 Functional Gain - DNTT ENSG00000107447 CDS Human protein_coding chr10:98080465 chr10:98080466 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24380 0 0 0 0 2 exosome 0.438720877402843 0.423369785293954 0.27303 0 hPsi_site_18104 iPseU_CNN:0.27303;iRNA_PseU:0 18105 chr1 54554318 54554318 1 + C A UCEC 54554317 + 54554297 54554337 41 ACTCAGATTCAGAAGTGGCTTCTCTTGCCAGAGAAGTTTAC ACTCAGATTCAGAAGTGGCTTATCTTGCCAGAGAAGTTTAC < 41bp 0.509623457150442 0.848814032142514 0.33009303 0.41217887 prediction 0.678381149984145 Functional Gain - TCEANC2 ENSG00000116205 CDS Human protein_coding chr1:54554317 chr1:54554318 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_24381 0 0 1 1 1 chromatin 0.438881175006013 0.438729473778512 0 0 hPsi_site_18105 iPseU_CNN:0;iRNA_PseU:0 18106 chr19 48956168 48956168 1 + C A SKCM 48956167 + 48956147 48956187 41 CCTCCCGCAGCAGCTGCTGTTCGTGCACCAGGGCGAGACCG CCTCCCGCAGCAGCTGCTGTTAGTGCACCAGGGCGAGACCG < 41bp 0.498558365264602 0.839180744801188 0.22397375 0.3372199 prediction 0.678361489602375 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48956167 chr19:48956168 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24382 0 0 1 0 0 Ribosome 0.434846916875986 0.438734423415326 0 0 hPsi_site_18106 iPseU_CNN:0;iRNA_PseU:0 18107 chr3 148586710 148586710 1 + C A COAD 148586709 + 148586689 148586729 41 CTTATCTCTGCAGCTTGACTTCTGGTATCCAGGTGCCACCC CTTATCTCTGCAGCTTGACTTATGGTATCCAGGTGCCACCC < 41bp 0.507107982312111 0.846285772521952 0.52787083 0.5501766 prediction 0.678355580419681 Functional Gain - CPA3 ENSG00000163751 CDS Human protein_coding chr3:148586709 chr3:148586710 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24383 0 0 0 0 1 Endoplasmic reticulum 0.43871859303073 0.438718591971906 0.04461154 0 hPsi_site_18107 iPseU_CNN:0.04461154;iRNA_PseU:0 18108 chrX 101822113 101822113 1 + C A UCEC 101822112 + 101822092 101822132 41 GTATTTAAGGAAGGTGAGTGTCTATAGATTCTTCTCTCCAG GTATTTAAGGAAGGTGAGTGTATATAGATTCTTCTCTCCAG < 41bp 0.502072557361785 0.841248413909529 0.25256205 0.430637 prediction 0.678351713095488 Functional Gain - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101822112 chrX:101822113 . . 0 22 hPsi_associated_SNPs_24384 0 0 0 1 0 unknown 0.438718592925159 0.438710918009944 0 0 hPsi_site_18108 iPseU_CNN:0;iRNA_PseU:0 18109 chr11 67191857 67191857 1 + G A BLCA 67191856 + 67191836 67191876 41 CTGAGTTCCACCGCCAGCCGTGAGACCCTGCAGGCCCTGCA CTGAGTTCCACCGCCAGCCGTAAGACCCTGCAGGCCCTGCA < 41bp 0.429127796921123 0.839173500977915 0.361625 0.6134544 prediction 0.678347001955831 Functional Gain - CARNS1 ENSG00000172508 CDS Human protein_coding chr11:67191856 chr11:67191857 nonsynonymous SNV 0.329 3 22 hPsi_associated_SNPs_24385 0 0 0 0 0 exosome 0.438069688420619 0.437807628288456 0.2269088 0 hPsi_site_18109 iPseU_CNN:0.2269088;iRNA_PseU:0 18110 chr2 231865178 231865178 1 + C A UCEC 231865177 + 231865157 231865197 41 GGGGCTATGCCATAGCCGCATCTTCGATGTCCTTCTGCCTC GGGGCTATGCCATAGCCGCATATTCGATGTCCTTCTGCCTC < 41bp 0.516272103941024 0.855443565827733 0.31773683 0.42774722 prediction 0.678342923773417 Functional Gain - SPATA3 ENSG00000173699 CDS Human protein_coding chr2:231865177 chr2:231865178 synonymous SNV . 0 22 hPsi_associated_SNPs_24386 0 0 0 0 2 unknown 0.438761565366411 0.438483664139058 0 0 hPsi_site_18110 iPseU_CNN:0;iRNA_PseU:0 18111 chr1 248636958 248636958 1 + G A LUSC 248636957 + 248636937 248636977 41 ACCATTTCCCCGTCAGGCTGTGGGATCCAGATGTTCTTCTA ACCATTTCCCCGTCAGGCTGTAGGATCCAGATGTTCTTCTA < 41bp 0.541591735838519 0.880755836396946 0.31714106 0.5423359 prediction 0.678328201116855 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248636957 chr1:248636958 nonsynonymous SNV 0.030 3 22 hPsi_associated_SNPs_24387 0 0 0 0 0 unknown 0.438750010664543 0.438581045213702 0.0846718 0 hPsi_site_18111 iPseU_CNN:0.0846718;iRNA_PseU:0 18112 chr5 140890560 140890560 1 + G A COAD 140890559 + 140890539 140890579 41 GGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACG GGGAGGGGGTGCCGGCACCATAGGATTGAGCGCCCGCTACG < 41bp 0.440138971138103 0.83916183817402 0.25778913 0.3593356 prediction 0.678323676348039 Functional Gain - PCDHGA1;PCDHGA10;PCDHGA11;PCDHGA12;PCDHGA2;PCDHGA3;PCDHGA4;PCDHGA5;PCDHGA6;PCDHGA7;PCDHGA8;PCDHGA9;PCDHGB1;PCDHGB2;PCDHGB3;PCDHGB4;PCDHGB5;PCDHGB6;PCDHGB7;PCDHGC3;PCDHGC4;PCDHGC5 ENSG00000081853;ENSG00000204956;ENSG00000240184;ENSG00000240764;ENSG00000242419;ENSG00000253159;ENSG00000253305;ENSG00000253485;ENSG00000253537;ENSG00000253731;ENSG00000253767;ENSG00000253846;ENSG00000253873;ENSG00000253910;ENSG00000253953;ENSG00000254122;ENSG00000254221;ENSG00000254245;ENSG00000261934;ENSG00000262209;ENSG00000262576 CDS Human other chr5:140890559 chr5:140890560 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24388 0 0 1 0 1 unknown 0.438706106992683 0.438683034247449 0 0 hPsi_site_18112 iPseU_CNN:0;iRNA_PseU:0 18113 chr17 40913372 40913372 1 + G A rs560836542 40913371 + 40913351 40913391 41 GCTCCGCCTCCTCCTCCTGCTGGGCGGTGAGCGCGGCGCCC GCTCCGCCTCCTCCTCCTGCTAGGCGGTGAGCGCGGCGCCC < 41bp 0.525580468553887 0.864742222125318 0.29317364 0.49929145 prediction 0.678323507142861 Functional Gain - RAMP2 ENSG00000131477 CDS Human protein_coding chr17:40913371 chr17:40913372 synonymous SNV . 0 22 hPsi_associated_SNPs_24389 0 0 0 0 1 exosome 0.438718225933642 0.442256664590962 0 0 hPsi_site_18113 iPseU_CNN:0;iRNA_PseU:0 18114 chr3 51981796 51981796 1 + G A BLCA 51981795 + 51981775 51981815 41 GGCCCACCATGTCGGCTACATGTTCCTGGGTGAGGTGGCCC GGCCCACCATGTCGGCTACATATTCCTGGGTGAGGTGGCCC < 41bp 0.438402355925345 0.83915973677793 0.3850875 0.71978784 prediction 0.67831947355586 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51981795 chr3:51981796 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_24390 0 0 0 0 1 nucleus 0.438718594538575 0.438718592574975 0.43957568 0 hPsi_site_18114 iPseU_CNN:0.43957568;iRNA_PseU:0 18115 chr15 85189529 85189529 1 + G T COAD 85189530 - 85189510 85189550 41 GTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCCGT GTGCATGAGAAAGAGGAGAGTATCTGGCCTAGGGTGGCCGT < 41bp 0.51186615622711 0.851023833116314 0.28480625 0.6845804 prediction 0.678315353778408 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85189530 chr15:85189529 nonsynonymous SNV 0.838 2 22 hPsi_associated_SNPs_24391 0 0 1 0 1 Cytosol 0.438718593004862 0.438718610275554 0.3691608 0 hPsi_site_18115 iPseU_CNN:0.3691608;iRNA_PseU:0 18116 chr1 24083594 24083594 1 + C A SKCM 24083593 + 24083573 24083613 41 AGCAGCACTGTTTCCTATGATCCTAGGAAACCCACTGTGAA AGCAGCACTGTTTCCTATGATACTAGGAAACCCACTGTGAA < 41bp 0.487771192176447 0.839153286164519 0.1776186 0.31371334 prediction 0.678306572329037 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24083593 chr1:24083594 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_24392 0 0 1 0 0 unknown 0.43871859468732 0.438715504112468 0 0 hPsi_site_18116 iPseU_CNN:0;iRNA_PseU:0 18117 chr17 7329091 7329091 1 + C A rs202243247 7329090 + 7329070 7329110 41 CGATGCCGAGGACATCTTACTCCTGCTGCTGGGCCTCATCG CGATGCCGAGGACATCTTACTACTGCTGCTGGGCCTCATCG < 41bp 0.506553298618487 0.845694168426295 0.24627 0.5637645 prediction 0.678281739615616 Functional Gain - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329090 chr17:7329091 synonymous SNV . 0 22 hPsi_associated_SNPs_24393 0 0 0 0 1 exosome 0.44026126400275 0.43855207119942 0.127529 0 hPsi_site_18117 iPseU_CNN:0.127529;iRNA_PseU:0 18118 chr19 39669141 39669141 1 + G A OV 39669140 + 39669120 39669160 41 GCGGGCCACGGCAGCCGAGCTGCTGAAGCACCCATTCCTGG GCGGGCCACGGCAGCCGAGCTACTGAAGCACCCATTCCTGG < 41bp 0.449836126241116 0.839140797832168 0.2611327 0.61378783 prediction 0.678281595664337 Functional Gain - PAK4 ENSG00000130669 CDS Human protein_coding chr19:39669140 chr19:39669141 synonymous SNV . 0 22 hPsi_associated_SNPs_24394 0 0 1 0 1 Ribosome 0.438691681299237 0.438608205690885 0.22757566 0 hPsi_site_18118 iPseU_CNN:0.22757566;iRNA_PseU:0 18119 chrX 134990315 134990315 1 + C A UCEC 134990314 + 134990294 134990334 41 CCAACCAACCCCTGATAACGTCTTGTCAGCTGTTACACCAG CCAACCAACCCCTGATAACGTATTGTCAGCTGTTACACCAG < 41bp 0.488071042878644 0.839134972874038 0.15682718 0.25382516 prediction 0.678269945748076 Functional Gain - SAGE1 ENSG00000181433 CDS Human protein_coding chrX:134990314 chrX:134990315 synonymous SNV . 0 22 hPsi_associated_SNPs_24395 0 0 0 0 1 Cytosol 0.43871859299511 0.438718592994956 0 0 hPsi_site_18119 iPseU_CNN:0;iRNA_PseU:0 18120 chr17 37881323 37881323 1 + G A ESCA 37881322 + 37881302 37881342 41 GGGATGAGCTACCTGGAGGATGTGCGGCTCGTACACAGGGA GGGATGAGCTACCTGGAGGATATGCGGCTCGTACACAGGGA < 41bp 0.558106127350784 0.897231433851499 0.38481998 0.664948 prediction 0.67825061300143 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37881322 chr17:37881323 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_24396 0 0 1 0 1 Cytosol 0.438717933994403 0.438711581127289 0.329896 0 hPsi_site_18120 iPseU_CNN:0.329896;iRNA_PseU:0 18121 chr17 43220904 43220904 1 + G A STAD 43220903 + 43220883 43220923 41 TGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAATGTTTCGG TGTGGCCCTTCGTCGTCCAGTAGCTCTTCCGAATGTTTCGG < 41bp 0.440948516733324 0.839119999161284 0.24600217 0.74073994 prediction 0.678239998322567 Functional Gain - ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220903 chr17:43220904 stopgain 1.000 3 22 hPsi_associated_SNPs_24397 0 0 1 0 1 Cytosol 0.43871860404487 0.438718593478969 0.48147988 0 hPsi_site_18121 iPseU_CNN:0.48147988;iRNA_PseU:0 18122 chr1 246810846 246810846 1 + C A UCEC 246810845 + 246810825 246810865 41 GTATACCTCCTGCATTGATTTCTGAGGGTAAATATTCACAG GTATACCTCCTGCATTGATTTATGAGGGTAAATATTCACAG < 41bp 0.515289972643144 0.854407673985446 0.33700466 0.48338884 prediction 0.678235402684605 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810845 chr1:246810846 nonsynonymous SNV 0.600 1 22 hPsi_associated_SNPs_24398 0 0 1 0 0 Ribosome 0.438724308515039 0.438763950019272 0 0 hPsi_site_18122 iPseU_CNN:0;iRNA_PseU:0 18123 chr12 10373055 10373055 1 + C A UCEC 10373054 + 10373034 10373074 41 TCCAGTTGGCCAGTTCTACTTCTTAATCCGGAAGAGAATCC TCCAGTTGGCCAGTTCTACTTATTAATCCGGAAGAGAATCC < 41bp 0.490184036177166 0.8391137662348 0.25616372 0.29593456 prediction 0.6782275324696 Functional Gain - GABARAPL1 ENSG00000139112 CDS Human protein_coding chr12:10373054 chr12:10373055 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24399 0 0 1 1 1 Cytosol 0.438728455861034 0.438760609305438 0 0 hPsi_site_18123 iPseU_CNN:0;iRNA_PseU:0 18124 chr1 44442813 44442813 1 + C A GBM 44442812 + 44442792 44442832 41 CGATGCTCAGAACCCCAGCCTCTTTGTAAAGATTCTCATCG CGATGCTCAGAACCCCAGCCTATTTGTAAAGATTCTCATCG < 41bp 0.49160348266824 0.83911200336823 0.37017518 0.37049043 prediction 0.678224006736461 Functional Gain - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44442812 chr1:44442813 synonymous SNV . 0 22 hPsi_associated_SNPs_24400 0 0 1 0 1 Ribosome 0.438718592954915 0.438718583990681 0 0 hPsi_site_18124 iPseU_CNN:0;iRNA_PseU:0 18125 chr6 89790847 89790847 1 + G A UCEC 89790846 + 89790826 89790866 41 GCCTCGCGCTCCAGCAGCTCTGCCCAACCGCAGCCTCGCCG GCCTCGCGCTCCAGCAGCTCTACCCAACCGCAGCCTCGCCG < 41bp 0.538027503874687 0.877138799138561 0.28599697 0.70890224 prediction 0.678222590527748 Functional Gain - PNRC1 ENSG00000146278 CDS Human protein_coding chr6:89790846 chr6:89790847 synonymous SNV . 0 22 hPsi_associated_SNPs_24401 0 0 1 0 1 Cytosol 0.43871859323078 0.438718593029228 0.41780448 0 hPsi_site_18125 iPseU_CNN:0.41780448;iRNA_PseU:0 18126 chr1 86905903 86905903 1 + C A LGG 86905902 + 86905882 86905922 41 ACCAGCGGAGATGATAAGCTTCTTGGCAATTGCTTACCCAC ACCAGCGGAGATGATAAGCTTATTGGCAATTGCTTACCCAC < 41bp 0.49021242766479 0.83910882438243 0.28471732 0.3417364 prediction 0.678217648764859 Functional Gain - CLCA2 ENSG00000137975 CDS Human protein_coding chr1:86905902 chr1:86905903 nonsynonymous SNV 0.131 0 22 hPsi_associated_SNPs_24402 0 0 0 0 1 exosome 0.438718624374054 0.438971893145036 0 0 hPsi_site_18126 iPseU_CNN:0;iRNA_PseU:0 18127 chr16 67233122 67233122 1 + C A UCEC 67233121 + 67233101 67233141 41 TGCGGGACACCGAGGTCAGGTCTCGGAAAGGGAGGACCTCC TGCGGGACACCGAGGTCAGGTATCGGAAAGGGAGGACCTCC < 41bp 0.494386989318346 0.839106121623714 0.28793076 0.78644216 prediction 0.678212243247427 Functional Gain - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67233121 chr16:67233122 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24403 0 0 1 0 0 Cytosol 0.43871862402766 0.438714265661909 0.57288432 0 hPsi_site_18127 iPseU_CNN:0.57288432;iRNA_PseU:0 18128 chr1 36558743 36558743 1 + G A UCEC 36558742 + 36558722 36558762 41 CGGTACCCACCGCCATCTACTGCTTCCTACGCTGCATGGAG CGGTACCCACCGCCATCTACTACTTCCTACGCTGCATGGAG < 41bp 0.545495252100489 0.884589376667661 0.38173956 0.64953095 prediction 0.678188249134344 Functional Gain - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36558742 chr1:36558743 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24404 0 0 1 0 1 Ribosome 0.438718601291198 0.438715889177505 0.2990619 0 hPsi_site_18128 iPseU_CNN:0.2990619;iRNA_PseU:0 18129 chr15 79603726 79603726 1 + G A rs111695359 79603725 + 79603705 79603745 41 GCAGTGCTTCCACGAGGAGGTGGAGCAGGGCGTGAAGTTCT GCAGTGCTTCCACGAGGAGGTAGAGCAGGGCGTGAAGTTCT < 41bp 0.448571979542828 0.839088690768178 0.20989147 0.49621832 prediction 0.678177381536356 Functional Gain - TMED3 ENSG00000166557 CDS Human protein_coding chr15:79603725 chr15:79603726 synonymous SNV . 0 22 hPsi_associated_SNPs_24405 0 0 1 2 1 Ribosome 0.438718587386106 0.438716513546978 0 0 hPsi_site_18129 iPseU_CNN:0;iRNA_PseU:0 18130 chr9 138651585 138651585 1 + C A UCEC 138651584 + 138651564 138651604 41 CCTGTCCCTCCTGACCTCCTTCTACTTCTGCATCGTCACCT CCTGTCCCTCCTGACCTCCTTATACTTCTGCATCGTCACCT < 41bp 0.514311577042876 0.853394306138774 0.4505026 0.69161683 prediction 0.678165458191795 Functional Gain - KCNT1 ENSG00000107147 CDS Human protein_coding chr9:138651584 chr9:138651585 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_24406 0 0 0 0 2 exosome 0.438711809550654 0.438718750800889 0.38323366 0 hPsi_site_18130 iPseU_CNN:0.38323366;iRNA_PseU:0 18131 chr20 61299153 61299153 1 + G A COAD 61299152 + 61299132 61299172 41 CCTGCAACGCTGCCTGCAGCTGCCAGCCAGAACACTACAGC CCTGCAACGCTGCCTGCAGCTACCAGCCAGAACACTACAGC < 41bp 0.423312064616015 0.839076578784179 0.27644968 0.6971772 prediction 0.678153157568358 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61299152 chr20:61299153 nonsynonymous SNV 0.066 5 22 hPsi_associated_SNPs_24407 0 0 1 1 0 Endoplasmic reticulum 0.436522280663333 0.438248743770492 0.3943544 0 hPsi_site_18131 iPseU_CNN:0.3943544;iRNA_PseU:0 18132 chr19 30506225 30506225 1 + G A rs144317191 30506224 + 30506204 30506244 41 ATCTAAGTTTGCCTTTATGATGCAGTGGCAGCATTTTGAAT ATCTAAGTTTGCCTTTATGATACAGTGGCAGCATTTTGAAT < 41bp 0.485451178721864 0.8390707749689 0.23181897 0.33618444 prediction 0.678141549937799 Functional Gain - URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506224 chr19:30506225 . . 0 22 hPsi_associated_SNPs_24408 0 0 1 2 0 Cytosol 0.438715518610624 0.438718917734579 0 0 hPsi_site_18132 iPseU_CNN:0;iRNA_PseU:0 18133 chr11 123811166 123811166 1 + G A UCEC 123811165 + 123811145 123811185 41 ATACACAATTGTCACCCCCATGCTGAATCCTGCCATCTATA ATACACAATTGTCACCCCCATACTGAATCCTGCCATCTATA < 41bp 0.535128820096354 0.874196791054458 0.2823925 0.6595634 prediction 0.678135941916207 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123811165 chr11:123811166 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_24409 0 0 0 0 0 exosome 0.439348933898329 0.438504497988712 0.3191268 0 hPsi_site_18133 iPseU_CNN:0.3191268;iRNA_PseU:0 18134 chr16 31485480 31485480 1 + C A BLCA 31485479 + 31485459 31485499 41 TCTCCTCTCTCCAGATGAAATCATGTCTCAGTTCCCATCTA TCTCCTCTCTCCAGATGAAATAATGTCTCAGTTCCCATCTA < 41bp 0.487225967690462 0.839067354181315 0.19510934 0.26389623 prediction 0.678134708362631 Functional Gain - TGFB1I1 ENSG00000140682 CDS Human protein_coding chr16:31485479 chr16:31485480 synonymous SNV . 0 22 hPsi_associated_SNPs_24410 0 0 0 0 2 Cytosol 0.438720091134321 0.438718575504301 0 0 hPsi_site_18134 iPseU_CNN:0;iRNA_PseU:0 18135 chr13 100204528 100204528 1 + G A COAD 100204527 + 100204507 100204547 41 CCATATTGGCCCTTTGGTTCTGCATATCTGTGCCTCTGACG CCATATTGGCCCTTTGGTTCTACATATCTGTGCCTCTGACG < 41bp 0.43329391550794 0.839062313714796 0.26227695 0.5189806 prediction 0.678124627429592 Functional Gain - TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100204527 chr13:100204528 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24411 0 0 1 0 1 Nucleus 0.438725097717379 0.43871809538226 0.0379612 0 hPsi_site_18135 iPseU_CNN:0.0379612;iRNA_PseU:0 18136 chr12 7177534 7177534 1 + G A UCEC 7177533 + 7177513 7177553 41 GACCCACCGTCTCTCCCATCTGCCTACCAGGCACCTCTTCC GACCCACCGTCTCTCCCATCTACCTACCAGGCACCTCTTCC < 41bp 0.433098088316666 0.839060820253735 0.34990662 0.60974944 prediction 0.67812164050747 Functional Gain - C1S ENSG00000182326 CDS Human protein_coding chr12:7177533 chr12:7177534 nonsynonymous SNV 0.747 4 22 hPsi_associated_SNPs_24412 0 0 1 0 0 Nucleus 0.438718675000077 0.438620577534795 0.21949888 0 hPsi_site_18136 iPseU_CNN:0.21949888;iRNA_PseU:0 18137 chr12 122332700 122332700 1 + C A GBM 122332699 + 122332679 122332719 41 ACTGTGAGGGCTACCCCCGGTCAGACGTGGACCTGTACCAA ACTGTGAGGGCTACCCCCGGTAAGACGTGGACCTGTACCAA < 41bp 0.521074645764325 0.860135035963819 0.5948946 0.7660155 prediction 0.678120780398989 Functional Gain - PSMD9 ENSG00000110801;ENSG00000256950 CDS Human other chr12:122332699 chr12:122332700 stopgain 0.308 1 22 hPsi_associated_SNPs_24413 0 0 1 0 2 Ribosome 0.438718526832878 0.438718555442023 0.3422418 0 hPsi_site_18137 iPseU_CNN:0.3422418;iRNA_PseU:0 18138 chr19 19312527 19312527 1 + G A BRCA 19312526 + 19312506 19312546 41 TGGTGCCCGCTGACCCTGAGTGAAGGCCGCCTGCCGGGGAC TGGTGCCCGCTGACCCTGAGTAAAGGCCGCCTGCCGGGGAC < 41bp 0.531068249910701 0.870127101757959 0.30163828 0.36727938 prediction 0.678117703694515 Functional Gain - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19312526 chr19:19312527 synonymous SNV . 0 22 hPsi_associated_SNPs_24414 0 0 1 0 1 Ribosome 0.438718580149803 0.438718592966025 0 0 hPsi_site_18138 iPseU_CNN:0;iRNA_PseU:0 18139 chr4 88356326 88356326 1 + G A LUSC 88356325 + 88356305 88356345 41 TATAAGCCTGTGGAATACACTGCAGTCTCTGTCTTGGCTGG TATAAGCCTGTGGAATACACTACAGTCTCTGTCTTGGCTGG < 41bp 0.515202658608712 0.854256327462037 0.34684384 0.5504731 prediction 0.67810733770665 Functional Gain - NUDT9 ENSG00000170502 CDS Human protein_coding chr4:88356325 chr4:88356326 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_24415 0 0 1 0 1 chromatin 0.438719689826006 0.438718577632796 0.1009462 0 hPsi_site_18139 iPseU_CNN:0.1009462;iRNA_PseU:0 18140 chr19 7976147 7976147 1 + G A SARC 7976146 + 7976126 7976166 41 CCCCTGCAGCCCGAGCGCATTGACCCCCCAGACCCCACCAA CCCCTGCAGCCCGAGCGCATTAACCCCCCAGACCCCACCAA < 41bp 0.421822515521701 0.839050110810227 0.21480334 0.414423 prediction 0.678100221620453 Functional Gain - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7976146 chr19:7976147 nonsynonymous SNV 0.924 2 22 hPsi_associated_SNPs_24416 0 0 1 0 2 Cytosol 0.438718587128302 0.438718580342544 0 0 hPsi_site_18140 iPseU_CNN:0;iRNA_PseU:0 18141 chr14 100847705 100847705 1 + C A CESC 100847704 + 100847684 100847724 41 GAACTTTCCCAAGTCATCTTTCCATGCTCAAAGTGAGTCTG GAACTTTCCCAAGTCATCTTTACATGCTCAAAGTGAGTCTG < 41bp 0.490347845857763 0.839045942021979 0.31670344 0.3304053 prediction 0.678091884043958 Functional Gain - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847704 chr14:100847705 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24417 0 0 0 0 0 chromatin 0.438887115422174 0.428305403170744 0 0 hPsi_site_18141 iPseU_CNN:0;iRNA_PseU:0 18142 chr16 57597795 57597795 1 + G A UCEC 57597794 + 57597774 57597814 41 TGCCCGGGGTCAGCACGCCATGCAGTTCCCCGCCGAGCTGA TGCCCGGGGTCAGCACGCCATACAGTTCCCCGCCGAGCTGA < 41bp 0.559665275757296 0.898708594281832 0.28109908 0.39022568 prediction 0.678086637049073 Functional Gain - ADGRG5 ENSG00000159618 CDS Human protein_coding chr16:57597794 chr16:57597795 nonsynonymous SNV 0.868 1 22 hPsi_associated_SNPs_24418 0 0 0 0 2 Ribosome 0.43871742639889 0.438716794377855 0 0 hPsi_site_18142 iPseU_CNN:0;iRNA_PseU:0 Multiple continuous traits in DGI samples 18143 chr22 44967977 44967977 1 + G A rs11912131 44967976 + 44967956 44967996 41 GTCAGTTCTGCTCTGAGACGTGAGGCTCAGAATCAGATGAA GTCAGTTCTGCTCTGAGACGTAAGGCTCAGAATCAGATGAA < 41bp 0.450635014546566 0.839019564281924 0.22806203 0.4396992 prediction 0.678039128563849 Functional Gain - LINC00207 ENSG00000187012 ncRNA_exonic Human lincRNA chr22:44967976 chr22:44967977 . . 0 22 hPsi_associated_SNPs_24419 0 0 0 0 1 unknown 0.438815210310801 0.438624635757109 0 0 hPsi_site_18143 iPseU_CNN:0;iRNA_PseU:0 18144 chr7 27856073 27856073 1 + C A GBM 27856072 + 27856052 27856092 41 TCAGAGCAAAATGGTTATGTTCTCACATTGTCAAATGCACA TCAGAGCAAAATGGTTATGTTATCACATTGTCAAATGCACA < 41bp 0.502973141241858 0.841984465067958 0.3269358 0.3386454 prediction 0.678022647652199 Functional Gain - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27856072 chr7:27856073 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24420 0 0 0 0 1 Ribosome 0.438712954365374 0.438757259532271 0 0 hPsi_site_18144 iPseU_CNN:0;iRNA_PseU:0 18145 chr1 173810049 173810049 1 + C A UCEC 173810048 + 173810028 173810068 41 AGAAACACAGAGATTGGATTTCTTCAAGATGCACTTAGTAA AGAAACACAGAGATTGGATTTATTCAAGATGCACTTAGTAA < 41bp 0.511398827790583 0.850404191349664 0.29918995 0.5810123 prediction 0.67801072711816 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173810048 chr1:173810049 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24421 0 0 1 0 2 chromatin 0.438830850271236 0.438748556763966 0.1620246 0 hPsi_site_18145 iPseU_CNN:0.1620246;iRNA_PseU:0 18146 chr3 88190151 88190151 1 + C T GBM 88190152 - 88190132 88190172 41 AGTGTCTGACATTTCTTTTGTGCAAGATGAGCCTCAAGTGC AGTGTCTGACATTTCTTTTGTACAAGATGAGCCTCAAGTGC < 41bp 0.466839636062532 0.838997415300315 0.18035462 0.26089907 prediction 0.677994830600629 Functional Gain - ZNF654 ENSG00000175105 CDS Human protein_coding chr3:88190152 chr3:88190151 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24422 0 0 1 0 2 chromatin 0.438826942216842 0.503475077313069 0 0.00695015462613857 hPsi_site_18146 iPseU_CNN:0;iRNA_PseU:0.00695015462613857 18147 chr3 119526140 119526140 1 + G A UCEC 119526139 + 119526119 119526159 41 AGCTGGAACCATGCTGACTTTGTACACTGTGAGGACACAGA AGCTGGAACCATGCTGACTTTATACACTGTGAGGACACAGA < 41bp 0.43361221949469 0.838997369414754 0.17746785 0.24815992 prediction 0.677994738829508 Functional Gain - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119526139 chr3:119526140 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_24423 0 0 1 0 1 nucleus 0.438763388538002 0.438725448739678 0 0 hPsi_site_18147 iPseU_CNN:0;iRNA_PseU:0 18148 chr12 4708239 4708239 1 + C A BRCA 4708238 + 4708218 4708258 41 GAATAACAACTTTCAAGGCTTCAGTCTGTCCATAGTTCGGC GAATAACAACTTTCAAGGCTTAAGTCTGTCCATAGTTCGGC < 41bp 0.482686740228988 0.83899011184317 0.19678971 0.30322134 prediction 0.677980223686341 Functional Gain - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4708238 chr12:4708239 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24424 0 0 0 0 2 Ribosome 0.438718060113328 0.438710367721258 0 0 hPsi_site_18148 iPseU_CNN:0;iRNA_PseU:0 18149 chrX 100808328 100808328 1 + G A COAD 100808327 + 100808307 100808347 41 ATCTCTGGGAACAGGACCCTTGCACCGAGTTTACCCTGCCC ATCTCTGGGAACAGGACCCTTACACCGAGTTTACCCTGCCC < 41bp 0.555330680605401 0.894315316480075 0.25858814 0.34251416 prediction 0.677969271749347 Functional Gain - ARMCX1 ENSG00000126947 CDS Human protein_coding chrX:100808327 chrX:100808328 nonsynonymous SNV 0.775 0 22 hPsi_associated_SNPs_24425 0 0 0 0 0 exosome 0.438718592995101 0.43871859299506 0 0 hPsi_site_18149 iPseU_CNN:0;iRNA_PseU:0 18150 chr2 29386778 29386778 1 + C A ESCA 29386777 + 29386757 29386797 41 GTGTGCAGTATTTTAGCTGTTCTCCAAGATATGGAATATTT GTGTGCAGTATTTTAGCTGTTATCCAAGATATGGAATATTT < 41bp 0.491052900844417 0.838982731002714 0.4342551 0.621204 prediction 0.677965462005428 Functional Gain - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29386777 chr2:29386778 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24426 0 0 1 0 2 nucleus 0.438735725988705 0.438623748559089 0.242408 0 hPsi_site_18150 iPseU_CNN:0.242408;iRNA_PseU:0 18151 chr1 45189867 45189867 1 + G A ESCA 45189866 + 45189846 45189886 41 CAAGGGCCTCGTGGCGCTGCTGATACCGTCGGTCAAGGAGA CAAGGGCCTCGTGGCGCTGCTAATACCGTCGGTCAAGGAGA < 41bp 0.435363483273493 0.838981478838791 0.09482527 0.14485651 prediction 0.677962957677582 Functional Gain - C1orf228 ENSG00000198520 CDS Human protein_coding chr1:45189866 chr1:45189867 synonymous SNV . 0 22 hPsi_associated_SNPs_24427 0 0 0 0 2 chromatin 0.438672494009859 0.438708780271151 0 0 hPsi_site_18151 iPseU_CNN:0;iRNA_PseU:0 18152 chr11 130343427 130343427 1 + G A COAD 130343426 + 130343406 130343446 41 GGGGGCCGTGCTCCGCGAGCTGCGGCAGTGGCCTGCAGAAG GGGGGCCGTGCTCCGCGAGCTACGGCAGTGGCCTGCAGAAG < 41bp 0.547269332869559 0.88625067999746 0.355744 0.7173867 prediction 0.677962694255801 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130343426 chr11:130343427 nonsynonymous SNV 0.272 4 22 hPsi_associated_SNPs_24428 0 0 0 0 0 exosome 0.438697279552908 0.43879649533935 0.4347734 0 hPsi_site_18152 iPseU_CNN:0.4347734;iRNA_PseU:0 18153 chr7 45115825 45115825 1 + G A rs114844860 45115824 + 45115804 45115844 41 ACTGTGAAGGAGCAGGGAGCTGCCGAGGGACACGAGCCTCA ACTGTGAAGGAGCAGGGAGCTACCGAGGGACACGAGCCTCA < 41bp 0.464208051969369 0.838981311390322 0.33460182 0.71514744 prediction 0.677962622780644 Functional Gain - CCM2 ENSG00000136280 UTR3 Human protein_coding chr7:45115824 chr7:45115825 . . 0 22 hPsi_associated_SNPs_24429 0 0 1 0 0 Ribosome 0.438705158754492 0.438721788276198 0.43029488 0 hPsi_site_18153 iPseU_CNN:0.43029488;iRNA_PseU:0 18154 chr11 67164743 67164743 1 + G A UCEC 67164742 + 67164722 67164762 41 CAATGAGGGCTCGCGGGTGCTGCCCTCCATTTCCCTTTCAC CAATGAGGGCTCGCGGGTGCTACCCTCCATTTCCCTTTCAC < 41bp 0.558502412480607 0.897483266943443 0.4330606 0.84153724 prediction 0.677961708925672 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67164742 chr11:67164743 synonymous SNV . 0 22 hPsi_associated_SNPs_24430 0 0 1 0 1 nucleus 0.438647430484715 0.43849899118348 0.68307448 0 hPsi_site_18154 iPseU_CNN:0.68307448;iRNA_PseU:0 18155 chr19 2247835 2247835 1 + G A SKCM 2247834 + 2247814 2247854 41 AGCCTCCCTGCTGGCCCCCCTGGGGTGAAGCGGCCTCCACC AGCCTCCCTGCTGGCCCCCCTAGGGTGAAGCGGCCTCCACC < 41bp 0.451715357193295 0.838978209902474 0.19344068 0.28668416 prediction 0.677956419804947 Functional Gain - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2247834 chr19:2247835 nonsynonymous SNV 0.560 1 22 hPsi_associated_SNPs_24431 0 0 1 0 1 Cytosol 0.43871859299512 0.438718592995102 0 0 hPsi_site_18155 iPseU_CNN:0;iRNA_PseU:0 18156 chr1 248636900 248636900 1 + G A UCEC 248636899 + 248636879 248636919 41 CATGTACCTATGCGTGACTGTGCCCAAGATGCTTGTGGGCC CATGTACCTATGCGTGACTGTACCCAAGATGCTTGTGGGCC < 41bp 0.457864274743283 0.838970400736926 0.22084332 0.908409 prediction 0.677940801473852 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248636899 chr1:248636900 synonymous SNV . 0 22 hPsi_associated_SNPs_24432 0 0 0 0 0 unknown 0.438718712226179 0.438718675924422 0.816818 0 hPsi_site_18156 iPseU_CNN:0.816818;iRNA_PseU:0 18157 chr8 22862037 22862037 1 + C A rs61759910 22862036 + 22862016 22862056 41 CGCCGTGGGTAAGACCAGGCTCATCTGTGCCCGCGCTTGCA CGCCGTGGGTAAGACCAGGCTAATCTGTGCCCGCGCTTGCA < 41bp 0.518067199478223 0.857035984498717 0.24956211 0.38469267 prediction 0.677937570040987 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22862036 chr8:22862037 synonymous SNV . 0 22 hPsi_associated_SNPs_24433 0 0 0 0 1 cytosol 0.440134650353516 0.4387470294147 0 0 hPsi_site_18157 iPseU_CNN:0;iRNA_PseU:0 18158 chr16 20787233 20787233 1 + G A SKCM 20787232 + 20787212 20787252 41 GAAGAGATGCGATGGAGTTTTGAGGAACTGGGATCTCTGTC GAAGAGATGCGATGGAGTTTTAAGGAACTGGGATCTCTGTC < 41bp 0.559237504483142 0.898199343909138 0.33134562 0.4251165 prediction 0.677923678851992 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787232 chr16:20787233 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_24434 0 0 1 0 1 Endoplasmic reticulum 0.437432588282913 0.438894248478678 0 0 hPsi_site_18158 iPseU_CNN:0;iRNA_PseU:0 18159 chrX 35966531 35966531 1 + C A STAD 35966530 + 35966510 35966550 41 AATGGTTATTAAAGTAGATTTCTGTGCAGACCAGCCAAGAA AATGGTTATTAAAGTAGATTTATGTGCAGACCAGCCAAGAA < 41bp 0.493955381460691 0.838954276779375 0.20627871 0.33983663 prediction 0.677908553558751 Functional Gain - CFAP47 ENSG00000165164 CDS Human protein_coding chrX:35966530 chrX:35966531 nonsynonymous SNV 0.633 0 22 hPsi_associated_SNPs_24435 0 0 0 0 1 cytosol 0.438718960820233 0.442000060594829 0 0 hPsi_site_18159 iPseU_CNN:0;iRNA_PseU:0 18160 chrX 79698578 79698578 1 + G A rs148082423 79698577 + 79698557 79698597 41 AGATTCCTTTCAAATTGTTTTGGATCCCATGTTAGACTTCT AGATTCCTTTCAAATTGTTTTAGATCCCATGTTAGACTTCT < 41bp 0.457107300222905 0.838950247628421 0.34283805 0.59205294 prediction 0.677900495256842 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79698577 chrX:79698578 synonymous SNV . 0 22 hPsi_associated_SNPs_24436 0 0 0 0 0 unknown 0.4387184757916 0.438722018719346 0.18410588 0 hPsi_site_18160 iPseU_CNN:0.18410588;iRNA_PseU:0 18161 chr8 42174380 42174380 1 + G A rs56230731 42174379 + 42174359 42174399 41 GCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCA GCAGGAAGCGGGCCTGGCGTTAATCCCCGATAAGCCTGCCA < 41bp 0.557197339517199 0.896136775676995 0.26283845 0.8682666 prediction 0.677878872319591 Functional Gain - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42174379 chr8:42174380 synonymous SNV . 0 22 hPsi_associated_SNPs_24437 0 0 1 0 1 Nucleus 0.438742132793468 0.438729471195235 0.7365332 0 hPsi_site_18161 iPseU_CNN:0.7365332;iRNA_PseU:0 18162 chr1 152957709 152957709 1 + G A SKCM 152957708 + 152957688 152957728 41 AAAAAAACACATTTGAAGCATGAATTCTCAGCAGCAGAAGC AAAAAAACACATTTGAAGCATAAATTCTCAGCAGCAGAAGC < 41bp 0.535234513073124 0.874173344479471 0.25438622 0.27255213 prediction 0.677877662812694 Functional Gain - SPRR1A ENSG00000169474 CDS Human protein_coding chr1:152957708 chr1:152957709 nonsynonymous SNV 0.971 1 22 hPsi_associated_SNPs_24438 0 0 0 0 2 exosome 0.438691644709541 0.438719225871693 0 0 hPsi_site_18162 iPseU_CNN:0;iRNA_PseU:0 18163 chr17 4436671 4436671 1 + G A rs201267925 4436670 + 4436650 4436690 41 GCCGTGGGCATGCTGGGCTCTGCCATCTTCATCTGCCTGAT GCCGTGGGCATGCTGGGCTCTACCATCTTCATCTGCCTGAT < 41bp 0.55967549373441 0.898613007148167 0.29618222 0.46452522 prediction 0.677875026827515 Functional Gain - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4436670 chr17:4436671 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24439 0 0 0 0 1 Ribosome 0.438785251552896 0.438703934080309 0 0 hPsi_site_18163 iPseU_CNN:0;iRNA_PseU:0 18164 chr15 74467244 74467244 1 + G A rs137923011 74467243 + 74467223 74467263 41 GTGGGCGCTTCTCCTGGGCCTGGCTCAGGCCTGCCCTGAGC GTGGGCGCTTCTCCTGGGCCTAGCTCAGGCCTGCCCTGAGC < 41bp 0.546748816955907 0.885681939713241 0.14004976 0.39075768 prediction 0.677866245514667 Functional Gain - ISLR ENSG00000129009 CDS Human protein_coding chr15:74467243 chr15:74467244 synonymous SNV . 0 22 hPsi_associated_SNPs_24440 0 0 0 0 1 Cytosol 0.438718591641806 0.438718592995102 0 0 hPsi_site_18164 iPseU_CNN:0;iRNA_PseU:0 18165 chr4 25665895 25665895 1 + C A UCEC 25665894 + 25665874 25665914 41 TTGATTTTACTTCTCGGATTTCTCTACTTTTTCGTGTGCTC TTGATTTTACTTCTCGGATTTATCTACTTTTTCGTGTGCTC < 41bp 0.507895610773554 0.84682714460159 0.26220703 0.3130616 prediction 0.677863067656071 Functional Gain - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25665894 chr4:25665895 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_24441 0 0 0 0 2 nucleus 0.438749537302051 0.438717549628528 0 0 hPsi_site_18165 iPseU_CNN:0;iRNA_PseU:0 18166 chr1 116609171 116609171 1 + G A COAD 116609170 + 116609150 116609190 41 CAATGGTCTTTACCATTCATTGTCTTCGGAGCCACGGGTCT CAATGGTCTTTACCATTCATTATCTTCGGAGCCACGGGTCT < 41bp 0.554128655062193 0.893054650423699 0.47596985 0.6184755 prediction 0.677851990723014 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116609170 chr1:116609171 nonsynonymous SNV 0.520 1 22 hPsi_associated_SNPs_24442 0 0 0 0 1 cytosol 0.439190559745058 0.439614815251149 0.236951 0 hPsi_site_18166 iPseU_CNN:0.236951;iRNA_PseU:0 18167 chr10 104182636 104182636 1 + G A CESC 104182635 + 104182615 104182655 41 CCATGTGGCGGAGTCCAGCCTGAGCCGCTTGCGGAAGCGCG CCATGTGGCGGAGTCCAGCCTAAGCCGCTTGCGGAAGCGCG < 41bp 0.447122220994807 0.838925784572835 0.30224532 0.43411332 prediction 0.677851569145669 Functional Gain - FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104182635 chr10:104182636 synonymous SNV . 0 22 hPsi_associated_SNPs_24443 0 0 1 0 1 Ribosome 0.438719476162366 0.43858515563779 0 0 hPsi_site_18167 iPseU_CNN:0;iRNA_PseU:0 18168 chr8 11667248 11667248 1 + G A PRAD 11667247 + 11667227 11667267 41 AGATGACATGACCATCAGTGTGGAAAAGAAGGTCCCGCTGT AGATGACATGACCATCAGTGTAGAAAAGAAGGTCCCGCTGT < 41bp 0.451780617680173 0.838923140967713 0.21974778 0.4839023 prediction 0.677846281935426 Functional Gain - FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11667247 chr8:11667248 synonymous SNV . 0 22 hPsi_associated_SNPs_24444 0 0 1 0 1 Cytosol 0.438710481798997 0.438960896042437 0 0 hPsi_site_18168 iPseU_CNN:0;iRNA_PseU:0 18169 chr3 47047075 47047075 1 + C A UCEC 47047074 + 47047054 47047094 41 GAAGGAGCTCATCCCGGAATTCTTCTACTTTCCTGACTTCC GAAGGAGCTCATCCCGGAATTATTCTACTTTCCTGACTTCC < 41bp 0.494302274127896 0.838921417554577 0.2627492 0.38932776 prediction 0.677842835109155 Functional Gain - NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47047074 chr3:47047075 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24445 0 0 1 0 2 Nucleus 0.438718611921407 0.438718594835659 0 0 hPsi_site_18169 iPseU_CNN:0;iRNA_PseU:0 18170 chr1 1396272 1396272 1 + C A UCEC 1396271 + 1396251 1396291 41 ATGTATCTTAACGAGTATGTTCTTAAGCCGGCCACAGAAGG ATGTATCTTAACGAGTATGTTATTAAGCCGGCCACAGAAGG < 41bp 0.492338239225392 0.838914098762112 0.77629423 0.7549703 prediction 0.677828197524225 Functional Gain - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1396271 chr1:1396272 nonsynonymous SNV 0.178 2 22 hPsi_associated_SNPs_24446 0 0 0 0 1 Nucleus 0.438718589915343 0.438718564252307 0 0 hPsi_site_18170 iPseU_CNN:0;iRNA_PseU:0 18171 chr14 21792870 21792870 1 + C A COAD 21792869 + 21792849 21792889 41 ATGAGGATAAAGTGGATATTTCTCTGCTGCATCAGGGTGAG ATGAGGATAAAGTGGATATTTATCTGCTGCATCAGGGTGAG < 41bp 0.511718752879589 0.850631873931915 0.5565783 0.56196684 prediction 0.677826242104651 Functional Gain - RPGRIP1 ENSG00000092200 CDS Human protein_coding chr14:21792869 chr14:21792870 nonsynonymous SNV 0.947 5 22 hPsi_associated_SNPs_24447 0 0 0 0 1 chromatin 0.438718457283349 0.438717155615902 0.01077708 0 hPsi_site_18171 iPseU_CNN:0.01077708;iRNA_PseU:0 18172 chr20 31672761 31672761 1 + C A OV 31672760 + 31672740 31672780 41 GCTCCTGCCCGGCGTGGGTGTCTACCTGAGCTTGTACACCC GCTCCTGCCCGGCGTGGGTGTATACCTGAGCTTGTACACCC < 41bp 0.524808807443082 0.863718517183259 0.27553892 0.6501981 prediction 0.677819419480354 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31672760 chr20:31672761 synonymous SNV . 0 22 hPsi_associated_SNPs_24448 0 0 0 0 2 exosome 0.438711244573113 0.440141056319517 0.3003962 0 hPsi_site_18172 iPseU_CNN:0.3003962;iRNA_PseU:0 18173 chr1 12057436 12057436 1 + C A UCEC 12057435 + 12057415 12057455 41 TGAGTGTGATGTGGCCCAACTCTAAGTGCCCACTTCTGAAG TGAGTGTGATGTGGCCCAACTATAAGTGCCCACTTCTGAAG < 41bp 0.481223274350361 0.838907892153351 0.2735287 0.34241974 prediction 0.677815784306701 Functional Gain - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12057435 chr1:12057436 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_24449 0 0 1 0 2 Ribosome 0.438718612415615 0.438718667946667 0 0 hPsi_site_18173 iPseU_CNN:0;iRNA_PseU:0 18174 chr1 110037772 110037772 1 + C A UCEC 110037771 + 110037751 110037791 41 TCTTTGATTCTTAGGTCTTTTCTCCTGGCACCCTGTATTCA TCTTTGATTCTTAGGTCTTTTATCCTGGCACCCTGTATTCA < 41bp 0.497334966504965 0.838906656312431 0.26493275 0.47947747 prediction 0.677813312624861 Functional Gain - CYB561D1 ENSG00000174151 CDS Human protein_coding chr1:110037771 chr1:110037772 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24450 0 0 1 0 2 Endoplasmic reticulum 0.438718594121589 0.438719265788993 0 0 hPsi_site_18174 iPseU_CNN:0;iRNA_PseU:0 18175 chr5 128302195 128302195 1 + G A LUAD 128302194 + 128302174 128302214 41 AGCCGGACTTCGTTCACGTGTGGTTCGGCCTCGCCAAGCTG AGCCGGACTTCGTTCACGTGTAGTTCGGCCTCGCCAAGCTG < 41bp 0.439936494274347 0.838906083513957 0.37018102 0.67633337 prediction 0.677812167027914 Functional Gain - SLC27A6 ENSG00000113396 CDS Human protein_coding chr5:128302194 chr5:128302195 stopgain 0.999 1 22 hPsi_associated_SNPs_24451 0 0 0 0 0 Endoplasmic reticulum 0.438725347641854 0.438718666979056 0.35266674 0 hPsi_site_18175 iPseU_CNN:0.35266674;iRNA_PseU:0 18176 chr11 45924447 45924447 1 + G A BLCA 45924446 + 45924426 45924466 41 GACACCAGCGCCCTGTCCTATGACTCTGTCAAGTACACGCT GACACCAGCGCCCTGTCCTATAACTCTGTCAAGTACACGCT < 41bp 0.421277857374045 0.838902054978325 0.28964505 0.5638727 prediction 0.677804109956649 Functional Gain - MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45924446 chr11:45924447 nonsynonymous SNV 0.966 4 22 hPsi_associated_SNPs_24452 0 0 0 0 0 Endoplasmic reticulum 0.438718592898557 0.438718671737377 0.1277454 0 hPsi_site_18176 iPseU_CNN:0.1277454;iRNA_PseU:0 18177 chr1 209933428 209933428 1 + G A SKCM 209933427 + 209933407 209933447 41 CCTCCCCTGGCTTGGCCCGGTGGGCTGAGAGCTATGAGGCC CCTCCCCTGGCTTGGCCCGGTAGGCTGAGAGCTATGAGGCC < 41bp 0.42244638771457 0.8388923308653 0.27931422 0.6954632 prediction 0.6777846617306 Functional Gain - TRAF3IP3 ENSG00000009790 CDS Human protein_coding chr1:209933427 chr1:209933428 stopgain 0.998 0 22 hPsi_associated_SNPs_24453 0 0 0 0 0 exosome 0.438718592995102 0.438718592936087 0.3909264 0 hPsi_site_18177 iPseU_CNN:0.3909264;iRNA_PseU:0 18178 chr6 26405837 26405837 1 + G A COAD 26405836 + 26405816 26405856 41 TTCCTTCTGCTCAACTTTCGTGTCTGCCTCCTTTTGCTTCA TTCCTTCTGCTCAACTTTCGTATCTGCCTCCTTTTGCTTCA < 41bp 0.441946675375764 0.838888222388913 0.31094196 0.67607856 prediction 0.677776444777825 Functional Gain - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26405836 chr6:26405837 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_24454 0 0 1 0 2 Nucleus 0.438718597432574 0.438718593979429 0.35215712 0 hPsi_site_18178 iPseU_CNN:0.35215712;iRNA_PseU:0 18179 chr12 7032656 7032656 1 + G A rs148043196 7032655 + 7032635 7032675 41 TTGACATCAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGT TTGACATCAGTTCCTTTGTGTATACTCACTGAAGCCTGCGT < 41bp 0.489564783678871 0.838882147032042 0.36493546 0.6122082 prediction 0.677764294064084 Functional Gain - ENO2 ENSG00000111674 UTR3 Human protein_coding chr12:7032655 chr12:7032656 . . 0 22 hPsi_associated_SNPs_24455 0 0 1 0 0 Cytosol 0.437059466249532 0.432985778758566 0.2244164 0 hPsi_site_18179 iPseU_CNN:0.2244164;iRNA_PseU:0 18180 chr5 140481379 140481379 1 + G A STAD 140481378 + 140481358 140481398 41 TGGAGACAACGGAAGAGTGATGTGTTCCATTGAGAACAATC TGGAGACAACGGAAGAGTGATATGTTCCATTGAGAACAATC < 41bp 0.523690069573534 0.862571919953343 0.24779159 0.27618006 prediction 0.677763700759618 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481378 chr5:140481379 nonsynonymous SNV 0.859 0 22 hPsi_associated_SNPs_24456 0 0 0 0 0 exosome 0.439706875656844 0.443419974637676 0 0 hPsi_site_18180 iPseU_CNN:0;iRNA_PseU:0 18181 chr17 73570979 73570979 1 + G A UCEC 73570978 + 73570958 73570998 41 GAGTGGCTGAGCGTCCAGGCTGCGCGATGAGCACACACTAC GAGTGGCTGAGCGTCCAGGCTACGCGATGAGCACACACTAC < 41bp 0.537065507410625 0.875941752614678 0.13296849 0.45855325 prediction 0.677752490408107 Functional Gain - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73570978 chr17:73570979 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_24457 0 0 1 1 2 Endoplasmic reticulum 0.466882739356957 0.441640918020659 0 0 hPsi_site_18181 iPseU_CNN:0;iRNA_PseU:0 18182 chr19 40097949 40097949 1 + C A HNSC 40097948 + 40097928 40097968 41 GGTGCAAGTGTCGAGAGATATCTCCCTGACCTCAGTGTGTG GGTGCAAGTGTCGAGAGATATATCCCTGACCTCAGTGTGTG < 41bp 0.499030676596436 0.838874087068371 0.37254778 0.62862563 prediction 0.677748174136743 Functional Gain - LGALS13 ENSG00000105198 CDS Human protein_coding chr19:40097948 chr19:40097949 synonymous SNV . 0 22 hPsi_associated_SNPs_24458 0 0 0 0 1 unknown 0.438726070951627 0.438655808992346 0.25725126 0 hPsi_site_18182 iPseU_CNN:0.25725126;iRNA_PseU:0 18183 chr15 91423399 91423399 1 + G A BRCA 91423398 + 91423378 91423418 41 GCCCAACCACATCACTCGGCTGGAGCACGCTCAGGCGCGGC GCCCAACCACATCACTCGGCTAGAGCACGCTCAGGCGCGGC < 41bp 0.423198915227252 0.83886869076598 0.28584874 0.59606475 prediction 0.67773738153196 Functional Gain - FURIN ENSG00000140564 CDS Human protein_coding chr15:91423398 chr15:91423399 synonymous SNV . 0 22 hPsi_associated_SNPs_24459 0 0 1 0 1 Ribosome 0.438769676546511 0.438718402280535 0.1921295 0 hPsi_site_18183 iPseU_CNN:0.1921295;iRNA_PseU:0 18184 chr11 124738891 124738891 1 + G A rs187438687 124738890 + 124738870 124738910 41 GCGTGCGCACCGCCTGCTGCTGCCCAGCGGCGCCCTCTTCT GCGTGCGCACCGCCTGCTGCTACCCAGCGGCGCCCTCTTCT < 41bp 0.438710096519344 0.838866462259796 0.29709604 0.5512852 prediction 0.677732924519592 Functional Gain - ROBO3 ENSG00000154134 CDS Human protein_coding chr11:124738890 chr11:124738891 synonymous SNV . 0 22 hPsi_associated_SNPs_24460 0 0 0 0 0 exosome 0.438852399232702 0.438836942397724 0.1025704 0 hPsi_site_18184 iPseU_CNN:0.1025704;iRNA_PseU:0 18185 chr3 119331937 119331937 1 + C A LUSC 119331936 + 119331916 119331956 41 GGATGCTGGAGATGCCCTCTTCGTGGAAGCCATCCACACAG GGATGCTGGAGATGCCCTCTTAGTGGAAGCCATCCACACAG < 41bp 0.52510517877606 0.863970146981049 0.26325443 0.5988478 prediction 0.677729936409978 Functional Gain - PLA1A ENSG00000144837 CDS Human protein_coding chr3:119331936 chr3:119331937 nonsynonymous SNV 0.984 5 22 hPsi_associated_SNPs_24461 0 0 0 2 2 exosome 0.438804147230277 0.438707205705783 0.1976956 0 hPsi_site_18185 iPseU_CNN:0.1976956;iRNA_PseU:0 18186 chr16 2514103 2514103 1 + G A rs544744371 2514102 + 2514082 2514122 41 CCCCCGGAGCCTCGCCGTCCTGTGGGGGTAGAGCGGAGCCT CCCCCGGAGCCTCGCCGTCCTATGGGGGTAGAGCGGAGCCT < 41bp 0.443771909093798 0.83885872056179 0.29641813 0.34772128 prediction 0.67771744112358 Functional Gain - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2514102 chr16:2514103 nonsynonymous SNV 0.020 1 22 hPsi_associated_SNPs_24462 0 0 0 0 1 Ribosome 0.438719378985372 0.438718819333513 0 0 hPsi_site_18186 iPseU_CNN:0;iRNA_PseU:0 18187 chr2 112942902 112942902 1 + G A LUAD 112942901 + 112942881 112942921 41 CAGCGGCAATGTGAGCTACGTGAAGACGTCTCCATTGTGAG CAGCGGCAATGTGAGCTACGTAAAGACGTCTCCATTGTGAG < 41bp 0.437741907712112 0.838854073098807 0.19160587 0.32007086 prediction 0.677708146197614 Functional Gain - FBLN7 ENSG00000144152 CDS Human protein_coding chr2:112942901 chr2:112942902 synonymous SNV . 0 22 hPsi_associated_SNPs_24463 0 0 0 0 1 exosome 0.440078151151114 0.438535471539103 0 0 hPsi_site_18187 iPseU_CNN:0;iRNA_PseU:0 18188 chr20 45702866 45702866 1 + C A LUAD 45702865 + 45702845 45702885 41 TACGGCTCATCCTACAACCCTCCCTACGTCCCGGCCAGCAG TACGGCTCATCCTACAACCCTACCTACGTCCCGGCCAGCAG < 41bp 0.479614568040304 0.838847547152588 0.33260962 0.43585193 prediction 0.677695094305175 Functional Gain - EYA2 ENSG00000064655 CDS Human protein_coding chr20:45702865 chr20:45702866 nonsynonymous SNV 0.648 1 22 hPsi_associated_SNPs_24464 0 0 0 0 1 Endoplasmic reticulum 0.438715550183657 0.438704246047933 0 0 hPsi_site_18188 iPseU_CNN:0;iRNA_PseU:0 18189 chr1 28293631 28293631 1 + C A HNSC 28293630 + 28293610 28293650 41 CCAGAGGGGTATCAGCTGCCTCAGAACAGGCGCATGACCCA CCAGAGGGGTATCAGCTGCCTAAGAACAGGCGCATGACCCA < 41bp 0.505189270415816 0.844027907557664 0.1616565 0.32149488 prediction 0.677677274283696 Functional Gain - XKR8 ENSG00000158156 CDS Human protein_coding chr1:28293630 chr1:28293631 nonsynonymous SNV 0.234 0 22 hPsi_associated_SNPs_24465 0 0 0 0 0 Endoplasmic reticulum 0.438718381640732 0.438710104837443 0 0 hPsi_site_18189 iPseU_CNN:0;iRNA_PseU:0 18190 chr5 33937007 33937007 1 + G A rs186017969 33937006 + 33936986 33937026 41 CTTGTGGTGGGAGCTGGGGCTGGAGTTGCCGGACGGCGCGC CTTGTGGTGGGAGCTGGGGCTAGAGTTGCCGGACGGCGCGC < 41bp 0.543260933862607 0.882091073510423 0.31625548 0.57012224 prediction 0.677660279295631 Functional Gain - RXFP3 ENSG00000182631 CDS Human protein_coding chr5:33937006 chr5:33937007 synonymous SNV . 0 22 hPsi_associated_SNPs_24466 0 0 0 0 0 unknown 0.438755794006678 0.43729061579107 0.14024448 0 hPsi_site_18190 iPseU_CNN:0.14024448;iRNA_PseU:0 18191 chr19 45368628 45368628 1 + G A BLCA 45368627 + 45368607 45368647 41 GCTGCCACCTGTTCCTGGACTGTACATCTCCCTGGTGACCT GCTGCCACCTGTTCCTGGACTATACATCTCCCTGGTGACCT < 41bp 0.557185438169374 0.89601306773769 0.29103285 0.5462114 prediction 0.677655259136633 Functional Gain - NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45368627 chr19:45368628 synonymous SNV . 0 22 hPsi_associated_SNPs_24467 0 0 1 0 0 Ribosome 0.438723804386792 0.438719027940556 0.0924228 0 hPsi_site_18191 iPseU_CNN:0.0924228;iRNA_PseU:0 18192 chr1 150957092 150957092 1 + G A SKCM 150957091 + 150957071 150957111 41 TCTGCTGTGGACGTGGCCATTGAAATTCTTGCCACTCGAAC TCTGCTGTGGACGTGGCCATTAAAATTCTTGCCACTCGAAC < 41bp 0.424163012725328 0.83882730449934 0.38139945 0.60574794 prediction 0.67765460899868 Functional Gain - ANXA9 ENSG00000143412 CDS Human protein_coding chr1:150957091 chr1:150957092 nonsynonymous SNV 0.844 4 22 hPsi_associated_SNPs_24468 0 0 0 0 2 cytosol 0.438719842033028 0.438718596120374 0.21149588 0 hPsi_site_18192 iPseU_CNN:0.21149588;iRNA_PseU:0 18193 chrX 16775301 16775301 1 + C A UCEC 16775300 + 16775280 16775320 41 TTCAGGATGAGGAAGAAATTTCTACTAGCCCAGGTGTTTCT TTCAGGATGAGGAAGAAATTTATACTAGCCCAGGTGTTTCT < 41bp 0.492736478329169 0.838825136288501 0.3144356 0.3727705 prediction 0.677650272577002 Functional Gain - SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16775300 chrX:16775301 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_24469 0 0 1 0 1 Ribosome 0.438718571478884 0.438726487969437 0 0 hPsi_site_18193 iPseU_CNN:0;iRNA_PseU:0 18194 chr14 101349406 101349406 1 + C T BRCA 101349407 - 101349387 101349427 41 AACCCGAAGGAAGCAGATGATGAGACTTCCGACCAGCCAAG AACCCGAAGGAAGCAGATGATAAGACTTCCGACCAGCCAAG < 41bp 0.44739094942465 0.83882412657865 0.2613428 0.3218773 prediction 0.677648253157301 Functional Gain - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101349407 chr14:101349406 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24470 0 0 0 0 0 exosome 0.438733138577422 0.438719004359196 0 0 hPsi_site_18194 iPseU_CNN:0;iRNA_PseU:0 18195 chr2 46583403 46583403 1 + C A UCEC 46583402 + 46583382 46583422 41 CAAGATGGCGACATGATCTTTCTGTCAGAAAACATCAGCAA CAAGATGGCGACATGATCTTTATGTCAGAAAACATCAGCAA < 41bp 0.52832182279722 0.867133352422547 0.33581412 0.4516052 prediction 0.677623059250653 Functional Gain - EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46583402 chr2:46583403 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24471 0 0 1 0 1 Cytosol 0.439076861747248 0.438715410711298 0 0 hPsi_site_18195 iPseU_CNN:0;iRNA_PseU:0 18196 chr19 55048334 55048334 1 + G A PRAD 55048333 + 55048313 55048353 41 AGATGCTATGGTTCCTTCAATGACTCTCCCTATAAGCCCCC AGATGCTATGGTTCCTTCAATAACTCTCCCTATAAGCCCCC < 41bp 0.450659420100799 0.838809839044761 0.22100267 0.39117962 prediction 0.677619678089522 Functional Gain - KIR3DX1 ENSG00000104970 CDS Human protein_coding chr19:55048333 chr19:55048334 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24472 0 0 0 0 1 Nucleus 0.438718593050585 0.438708667991374 0 0 hPsi_site_18196 iPseU_CNN:0;iRNA_PseU:0 18197 chr7 150738289 150738289 1 + C A BLCA 150738288 + 150738268 150738308 41 CACCCTTGACCCCTCCTGGCTCCGGGGCCAGGTTGTCGGCT CACCCTTGACCCCTCCTGGCTACGGGGCCAGGTTGTCGGCT < 41bp 0.521875812478266 0.860685051723714 0.2421701 0.61614037 prediction 0.677618478490897 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150738288 chr7:150738289 synonymous SNV . 0 22 hPsi_associated_SNPs_24473 0 0 0 1 1 Ribosome 0.438718593390539 0.438718593059022 0.23228074 0 hPsi_site_18197 iPseU_CNN:0.23228074;iRNA_PseU:0 18198 chrX 2945446 2945446 1 + G A LUSC 2945445 + 2945425 2945465 41 GAGGCTGGGAGAGTGATCAATGAGCCCACCAGCTTAATGGA GAGGCTGGGAGAGTGATCAATAAGCCCACCAGCTTAATGGA < 41bp 0.425639852674108 0.838805006051001 0.2834258 0.36142266 prediction 0.677610012102003 Functional Gain - ARSH ENSG00000205667 CDS Human protein_coding chrX:2945445 chrX:2945446 nonsynonymous SNV 0.014 4 22 hPsi_associated_SNPs_24474 0 0 0 0 2 exosome 0.438718885184279 0.438868477549336 0 0 hPsi_site_18198 iPseU_CNN:0;iRNA_PseU:0 18199 chr19 57133636 57133636 1 + G A LGG 57133635 + 57133615 57133655 41 CACCGGCGAGAAGCCCTACGTGTGCGGCGAGTGCGGCAAGG CACCGGCGAGAAGCCCTACGTATGCGGCGAGTGCGGCAAGG < 41bp 0.434046925558051 0.838804899792278 0.3095792 0.6838803 prediction 0.677609799584556 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133635 chr19:57133636 synonymous SNV . 0 22 hPsi_associated_SNPs_24475 0 0 0 0 0 exosome 0.438712325759206 0.438718688487251 0.3677606 0 hPsi_site_18199 iPseU_CNN:0.3677606;iRNA_PseU:0 18200 chr11 2946313 2946313 1 + G A rs78595170 2946312 + 2946292 2946332 41 ACCCACGGTCGGCGGCCTCCTGTACCGCAGCTTTGGCGTCC ACCCACGGTCGGCGGCCTCCTATACCGCAGCTTTGGCGTCC < 41bp 0.554443281177009 0.893241898511912 0.21920186 0.7629607 prediction 0.677597234669806 Functional Gain - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2946312 chr11:2946313 synonymous SNV . 0 22 hPsi_associated_SNPs_24476 0 0 1 0 1 Ribosome 0.437424600716836 0.438687719685378 0.5259214 0 hPsi_site_18200 iPseU_CNN:0.5259214;iRNA_PseU:0 18201 chr9 35808839 35808839 1 + C A LUAD 35808838 + 35808818 35808858 41 ACACTGCTTCTCGAATGGAGTCTAATGGTCAAGGTAAGACA ACACTGCTTCTCGAATGGAGTATAATGGTCAAGGTAAGACA < 41bp 0.508036756085609 0.84683012321894 0.3243602 0.4529769 prediction 0.677586734266663 Functional Gain - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35808838 chr9:35808839 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24477 0 0 1 0 2 chromatin 0.438677440731101 0.438552545730624 0 0 hPsi_site_18201 iPseU_CNN:0;iRNA_PseU:0 18202 chr16 1817656 1817656 1 + C A CESC 1817655 + 1817635 1817675 41 GGGTGTCCATCCGCCTGGACTCCACCCTGAGGCTCTACCAT GGGTGTCCATCCGCCTGGACTACACCCTGAGGCTCTACCAT < 41bp 0.489227344591521 0.838792118369234 0.5139297 0.67760617 prediction 0.677584236738468 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1817655 chr16:1817656 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_24478 0 0 1 0 2 chromatin 0.438689118068338 0.438739095659121 0.32735294 0 hPsi_site_18202 iPseU_CNN:0.32735294;iRNA_PseU:0 18203 chr22 20079140 20079140 1 + G A LUSC 20079139 + 20079119 20079159 41 ATTACTTTATCAGTGCAAGATGCACCCACAAAGAAAGGTAT ATTACTTTATCAGTGCAAGATACACCCACAAAGAAAGGTAT < 41bp 0.445430952169526 0.838785487453413 0.18274584 0.27975744 prediction 0.677570974906825 Functional Gain - DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079139 chr22:20079140 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_24479 0 0 1 0 1 Nucleus 0.446758456362063 0.440612850155299 0 0 hPsi_site_18203 iPseU_CNN:0;iRNA_PseU:0 18204 chr4 96761995 96761995 1 + G A LUAD 96761994 + 96761974 96762014 41 TATGGAATGGGAACATCTACTGAGAGAGCAGCAGCCAGCCC TATGGAATGGGAACATCTACTAAGAGAGCAGCAGCCAGCCC < 41bp 0.459251147692187 0.838780461006815 0.23444265 0.26910582 prediction 0.677560922013631 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761994 chr4:96761995 nonsynonymous SNV 0.009 2 22 hPsi_associated_SNPs_24480 0 0 0 0 0 unknown 0.43869060575584 0.438529018194058 0 0 hPsi_site_18204 iPseU_CNN:0;iRNA_PseU:0 18205 chr2 11927238 11927238 1 + G A rs33997857 11927237 + 11927217 11927257 41 GCTGTGTCATATCAACAGTTTGTGGACAACCCCGCTATTAT GCTGTGTCATATCAACAGTTTATGGACAACCCCGCTATTAT < 41bp 0.562305793469864 0.901083417552675 0.5318194 0.6587871 prediction 0.677555248165623 Functional Gain - LPIN1 ENSG00000134324 CDS Human protein_coding chr2:11927237 chr2:11927238 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24481 2 0 1 0 1 Cytosol 0.438718739025016 0.438718593886211 0.2539354 0 hPsi_site_18205 iPseU_CNN:0.2539354;iRNA_PseU:0 18206 chr3 196388272 196388272 1 + G A BLCA 196388271 + 196388251 196388291 41 TGAGCAGCTCTCGAGAGGTCTGCGGACCATCTACCTCAGTC TGAGCAGCTCTCGAGAGGTCTACGGACCATCTACCTCAGTC < 41bp 0.552945177446103 0.891700557430762 0.21804535 0.27623856 prediction 0.677510759969318 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196388271 chr3:196388272 synonymous SNV . 0 22 hPsi_associated_SNPs_24482 0 0 0 0 0 chromatin 0.438661845767215 0.438717120590628 0 0 hPsi_site_18206 iPseU_CNN:0;iRNA_PseU:0 18207 chr2 101620636 101620636 1 + G A STAD 101620635 + 101620615 101620655 41 CGTAGGGGCTTCAAGAAGCGTGCACCTCGGGCACTCAAAGA CGTAGGGGCTTCAAGAAGCGTACACCTCGGGCACTCAAAGA < 41bp 0.445870183295366 0.838751874383756 0.18124497 0.6868106 prediction 0.677503748767513 Functional Gain - RPL31 ENSG00000071082 CDS Human protein_coding chr2:101620635 chr2:101620636 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24483 0 0 1 0 1 Cytosol 0.438714752694033 0.438442131160212 0.3736212 0 hPsi_site_18207 iPseU_CNN:0.3736212;iRNA_PseU:0 18208 chr16 2815055 2815055 1 + G A LUSC 2815054 + 2815034 2815074 41 CCCCAGAGCTCAACAACAAGTGTCTTACCCCCCAGAGAGAA CCCCAGAGCTCAACAACAAGTATCTTACCCCCCAGAGAGAA < 41bp 0.547686463956132 0.886434032993764 0.3691335 0.69724476 prediction 0.677495138075263 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815054 chr16:2815055 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_24484 0 0 1 0 0 Nucleus 0.438718592995094 0.438718592995101 0.39448952 0 hPsi_site_18208 iPseU_CNN:0.39448952;iRNA_PseU:0 18209 chr8 42911679 42911679 1 + G A rs143321089 42911678 + 42911658 42911698 41 AGCCTGGACTCGCCCTCCTATGTCCTGTACAGGTAACGCCC AGCCTGGACTCGCCCTCCTATATCCTGTACAGGTAACGCCC < 41bp 0.538325201785062 0.877071463301323 0.3647282 0.47808614 prediction 0.677492523032523 Functional Gain - FNTA ENSG00000168522 CDS Human protein_coding chr8:42911678 chr8:42911679 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_24485 0 0 1 0 1 Endoplasmic reticulum 0.438718592994334 0.438718592995291 0 0 hPsi_site_18209 iPseU_CNN:0;iRNA_PseU:0 18210 chr16 625973 625973 1 + G A rs199735408 625972 + 625952 625992 41 ACCCTGCCCAGCTGATGAGGTGTGGGCCTGCCCTGGTCTCT ACCCTGCCCAGCTGATGAGGTATGGGCCTGCCCTGGTCTCT < 41bp 0.435983804061944 0.838742648899667 0.2820804 0.5692501 prediction 0.677485297799334 Functional Gain - PIGQ ENSG00000007541 CDS Human protein_coding chr16:625972 chr16:625973 nonsynonymous SNV 0.698 1 22 hPsi_associated_SNPs_24486 0 0 1 0 0 Ribosome 0.4387185801994 0.438717729622173 0.1385002 0 hPsi_site_18210 iPseU_CNN:0.1385002;iRNA_PseU:0 18211 chr15 78635889 78635889 1 + C A rs146054360 78635888 + 78635868 78635908 41 AAGATCCACTGCACGCAAACTCTTCTTGAAGGGGACGGCCC AAGATCCACTGCACGCAAACTATTCTTGAAGGGGACGGCCC < 41bp 0.489830109861286 0.838742104249704 0.33682042 0.34539235 prediction 0.677484208499408 Functional Gain - CRABP1 ENSG00000166426 CDS Human protein_coding chr15:78635888 chr15:78635889 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24487 0 0 0 0 1 exosome 0.438729980276496 0.438753846037702 0 0 hPsi_site_18211 iPseU_CNN:0;iRNA_PseU:0 18212 chr9 140100686 140100686 1 + G A BLCA 140100685 + 140100665 140100705 41 TGTGTGTCTTTTTGTTGAGGTGAATCTGATTAACGAGCCCC TGTGTGTCTTTTTGTTGAGGTAAATCTGATTAACGAGCCCC < 41bp 0.445577390668668 0.838739221160149 0.23305047 0.25921035 prediction 0.677478442320297 Functional Gain - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140100685 chr9:140100686 synonymous SNV . 0 22 hPsi_associated_SNPs_24488 0 0 1 0 2 chromatin 0.438718592984731 0.438718592922099 0 0 hPsi_site_18212 iPseU_CNN:0;iRNA_PseU:0 18213 chr2 10922457 10922457 1 + G A LUSC 10922456 + 10922436 10922476 41 TTAAGAGAGGTTCTAAACTCTGTCTTCCGACATCTGGATGA TTAAGAGAGGTTCTAAACTCTATCTTCCGACATCTGGATGA < 41bp 0.440912982722958 0.838735867235638 0.31207335 0.44150135 prediction 0.677471734471277 Functional Gain - ATP6V1C2 ENSG00000143882 CDS Human protein_coding chr2:10922456 chr2:10922457 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24489 0 0 0 0 2 Endoplasmic reticulum 0.438718723684794 0.43871897775718 0 0 hPsi_site_18213 iPseU_CNN:0;iRNA_PseU:0 18214 chr17 72440049 72440049 1 + C A rs142708564 72440048 + 72440028 72440068 41 ATGGCCCTGATGCACAAAGTTCCGGTAAGTGGGTTCCCCAG ATGGCCCTGATGCACAAAGTTACGGTAAGTGGGTTCCCCAG < 41bp 0.485365566479714 0.838735810857065 0.42149884 0.6336779 prediction 0.67747162171413 Functional Gain - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72440048 chr17:72440049 nonsynonymous SNV 0.966 1 22 hPsi_associated_SNPs_24490 0 0 1 1 2 nucleus 0.438718512057175 0.438718339350728 0.2673558 0 hPsi_site_18214 iPseU_CNN:0.2673558;iRNA_PseU:0 18215 chr1 70883695 70883695 1 + G A LGG 70883694 + 70883674 70883714 41 AAGCAGGAGACCAAATTATTTGTATGGATGATGTGTATGGA AAGCAGGAGACCAAATTATTTATATGGATGATGTGTATGGA < 41bp 0.545136139932446 0.883868882270238 0.31217 0.4459474 prediction 0.677465484675584 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70883694 chr1:70883695 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_24491 0 0 1 2 2 Cytosol 0.438718592993826 0.438718592994545 0 0 hPsi_site_18215 iPseU_CNN:0;iRNA_PseU:0 18216 chr1 111861779 111861779 1 + G A LUAD 111861778 + 111861758 111861798 41 AAAATGGAGCCACTCAGGGATGGGATGCCCCTCAGGAAGTG AAAATGGAGCCACTCAGGGATAGGATGCCCCTCAGGAAGTG < 41bp 0.556149915597666 0.894877019171021 0.3205829 0.44671673 prediction 0.67745420714671 Functional Gain - CHIA ENSG00000134216 CDS Human protein_coding chr1:111861778 chr1:111861779 stopgain 0.151 0 22 hPsi_associated_SNPs_24492 0 0 0 0 2 exosome 0.438718592995044 0.438718423635365 0 0 hPsi_site_18216 iPseU_CNN:0;iRNA_PseU:0 18217 chr19 17389748 17389748 1 + G A BLCA 17389747 + 17389727 17389767 41 CAGCCCTGGAGTTGCACAACTGCATGGCGAAACTGTTGGCC CAGCCCTGGAGTTGCACAACTACATGGCGAAACTGTTGGCC < 41bp 0.545465726051424 0.884190354625445 0.28853855 0.63961494 prediction 0.677449257148043 Functional Gain - BABAM1 ENSG00000105393 CDS Human protein_coding chr19:17389747 chr19:17389748 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_24493 0 0 1 0 1 Ribosome 0.438717406701866 0.43871823280619 0.27922988 0 hPsi_site_18217 iPseU_CNN:0.27922988;iRNA_PseU:0 18218 chrX 69460015 69460015 1 + G A SKCM 69460014 + 69459994 69460034 41 CCTCTGCCACTGCCCCAAATTGAAAAGCCAAGCCAGGAGAT CCTCTGCCACTGCCCCAAATTAAAAAGCCAAGCCAGGAGAT < 41bp 0.443564927232263 0.838720058779569 0.23501247 0.34974712 prediction 0.677440117559138 Functional Gain - AWAT1 ENSG00000204195 CDS Human protein_coding chrX:69460014 chrX:69460015 nonsynonymous SNV 0.769 0 22 hPsi_associated_SNPs_24494 0 0 0 0 1 unknown 0.438718592995102 0.438718593045067 0 0 hPsi_site_18218 iPseU_CNN:0;iRNA_PseU:0 18219 chr4 166232663 166232663 1 + C A STAD 166232662 + 166232642 166232682 41 ATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATAC ATAAAGTCTAATGAGTGGTTTAATGTAGCTCCCATGAATAC < 41bp 0.479943776431744 0.838720004487836 0.35321903 0.6442002 prediction 0.677440008975673 Functional Gain - KLHL2 ENSG00000109466 CDS Human protein_coding chr4:166232662 chr4:166232663 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_24495 0 0 0 0 2 chromatin 0.438721691119618 0.438718632485541 0.2884004 0 hPsi_site_18219 iPseU_CNN:0.2884004;iRNA_PseU:0 18220 chr11 64988480 64988480 1 + G A rs61740084 64988479 + 64988459 64988499 41 CTCCCCAGTTGTGGAGTGGATGCCCACACGGGGCCGGACTG CTCCCCAGTTGTGGAGTGGATACCCACACGGGGCCGGACTG < 41bp 0.457474828112479 0.838713121948722 0.33364683 0.7417491 prediction 0.677426243897444 Functional Gain - SLC22A20 ENSG00000197847 ncRNA_exonic Human transcribed_unitary_pseudogene chr11:64988479 chr11:64988480 . . 0 22 hPsi_associated_SNPs_24496 0 0 0 0 1 unknown 0.438710949854766 0.438477887451974 0.4834982 0 hPsi_site_18220 iPseU_CNN:0.4834982;iRNA_PseU:0 18221 chr6 32008285 32008285 1 + G A UCEC 32008284 + 32008264 32008304 41 GCACGGCTGCCCTTGCTCAATGCCACCATCGCCGAGGTGCT GCACGGCTGCCCTTGCTCAATACCACCATCGCCGAGGTGCT < 41bp 0.483575612811999 0.838711929646978 0.2888425 0.51478904 prediction 0.677423859293956 Functional Gain - CYP21A2 ENSG00000231852 CDS Human protein_coding chr6:32008284 chr6:32008285 nonsynonymous SNV 0.949 5 22 hPsi_associated_SNPs_24497 0 0 0 0 1 Cytosol 0.43871940289285 0.438718595745254 0.0295780800000001 0 hPsi_site_18221 iPseU_CNN:0.0295780800000001;iRNA_PseU:0 18222 chr5 137518570 137518570 1 + G A CESC 137518569 + 137518549 137518589 41 GGAGGAGCTGTCCACTTCCTTGAAGAGGAGTGTCTACATCG GGAGGAGCTGTCCACTTCCTTAAAGAGGAGTGTCTACATCG < 41bp 0.433148132573119 0.838707675363762 0.38156176 0.59749717 prediction 0.677415350727524 Functional Gain - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518569 chr5:137518570 synonymous SNV . 0 22 hPsi_associated_SNPs_24498 0 0 1 0 1 Nucleus 0.43877978685338 0.438737661603808 0.19499434 0 hPsi_site_18222 iPseU_CNN:0.19499434;iRNA_PseU:0 18223 chr17 14248424 14248424 1 + G A COAD 14248423 + 14248403 14248443 41 TTCGTCACGCGGGAGGCCCCTGCGCGCATCTCGGCCATGTC TTCGTCACGCGGGAGGCCCCTACGCGCATCTCGGCCATGTC < 41bp 0.552312462089172 0.891011259256038 0.25049308 0.5273456 prediction 0.677397594333731 Functional Gain - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14248423 chr17:14248424 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_24499 0 0 0 0 1 Endoplasmic reticulum 0.438718592864893 0.438719032783756 0.0546911999999999 0 hPsi_site_18223 iPseU_CNN:0.0546911999999999;iRNA_PseU:0 18224 chr2 27282314 27282314 1 + C A PRAD 27282313 + 27282293 27282333 41 CTGCAACATGTGTTCGGTTGTCTGGGGCATTGCTGGGGGAA CTGCAACATGTGTTCGGTTGTATGGGGCATTGCTGGGGGAA < 41bp 0.496204767391385 0.838695651090333 0.18970996 0.29106575 prediction 0.677391302180666 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282313 chr2:27282314 nonsynonymous SNV 0.934 1 22 hPsi_associated_SNPs_24500 0 0 1 0 0 Cytosol 0.43871817503124 0.438821545747276 0 0 hPsi_site_18224 iPseU_CNN:0;iRNA_PseU:0 18225 chr14 20978663 20978663 1 + G A LUSC 20978662 + 20978642 20978682 41 TCTGGTGCAGATCTTTTTCATGTTGCTGATGCTGCTGCTGG TCTGGTGCAGATCTTTTTCATATTGCTGATGCTGCTGCTGG < 41bp 0.458624112647984 0.838695339115557 0.44282576 0.45072144 prediction 0.677390678231115 Functional Gain - RNASE10 ENSG00000182545 CDS Human protein_coding chr14:20978662 chr14:20978663 nonsynonymous SNV 0.684 0 22 hPsi_associated_SNPs_24501 0 0 0 0 1 exosome 0.437526586927984 0.436713842728226 0 0 hPsi_site_18225 iPseU_CNN:0;iRNA_PseU:0 18226 chr6 116833060 116833060 1 + C A UCEC 116833059 + 116833039 116833079 41 GGTGTTACTGATCCTGGGATTCTTTCTGAACAATAGGTCGT GGTGTTACTGATCCTGGGATTATTTCTGAACAATAGGTCGT < 41bp 0.495072481483611 0.838694397964393 0.30503643 0.42993918 prediction 0.677388795928786 Functional Gain - FAM26E ENSG00000178033 CDS Human protein_coding chr6:116833059 chr6:116833060 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_24502 0 0 0 0 0 exosome 0.438718605225084 0.438777201001813 0 0 hPsi_site_18226 iPseU_CNN:0;iRNA_PseU:0 18227 chr3 32776347 32776347 1 + C A HNSC 32776346 + 32776326 32776366 41 ATGGAGTTTGCAGCCATATGTCTCAGAAATGCCTTGTTGCT ATGGAGTTTGCAGCCATATGTATCAGAAATGCCTTGTTGCT < 41bp 0.515462737802868 0.854155298802418 0.255479 0.45114234 prediction 0.677385121999101 Functional Gain - CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32776346 chr3:32776347 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24503 0 0 1 1 1 Endoplasmic reticulum 0.438736074311003 0.438408484813827 0 0 hPsi_site_18227 iPseU_CNN:0;iRNA_PseU:0 18228 chr19 36430708 36430708 1 + G A rs115371487 36430707 + 36430687 36430727 41 CTCACTGGGCGAGGGCCAGCTGCGCGGCCTGGTCAACTTGC CTCACTGGGCGAGGGCCAGCTACGCGGCCTGGTCAACTTGC < 41bp 0.553613350399916 0.892285477754922 0.2252908 0.8406028 prediction 0.677344254710012 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430707 chr19:36430708 synonymous SNV . 0 22 hPsi_associated_SNPs_24504 0 0 0 0 0 nucleus 0.43871791198644 0.438717353000091 0.6812056 0 hPsi_site_18228 iPseU_CNN:0.6812056;iRNA_PseU:0 18229 chr18 63511243 63511243 1 + G A HNSC 63511242 + 63511222 63511262 41 GTGTCGGAAGCTACCCAGGTTGGGAATATCATTGGCACTGT GTGTCGGAAGCTACCCAGGTTAGGAATATCATTGGCACTGT < 41bp 0.427800034729142 0.838671366776283 0.3009197 0.45798108 prediction 0.677342733552566 Functional Gain - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63511242 chr18:63511243 nonsynonymous SNV 0.799 4 22 hPsi_associated_SNPs_24505 0 0 0 0 1 exosome 0.43871865870554 0.43875454452492 0 0 hPsi_site_18229 iPseU_CNN:0;iRNA_PseU:0 18230 chr2 10192541 10192541 1 + C A PAAD 10192540 + 10192520 10192560 41 CCACATGACGACCAAGAAGATCCCAGGCTGGCAGGCAGAGG CCACATGACGACCAAGAAGATACCAGGCTGGCAGGCAGAGG < 41bp 0.497170311664111 0.838670120440184 0.2651845 0.49043798 prediction 0.677340240880367 Functional Gain - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10192540 chr2:10192541 synonymous SNV . 0 22 hPsi_associated_SNPs_24506 0 0 1 0 0 nucleoplasm 0.438718581766346 0.438785475576968 0 0 hPsi_site_18230 iPseU_CNN:0;iRNA_PseU:0 18231 chr15 65918027 65918027 1 + C A STAD 65918026 + 65918006 65918046 41 GGCTCTGCTGTGTTCAACATTCTCTTTGTCATTGGCACTTG GGCTCTGCTGTGTTCAACATTATCTTTGTCATTGGCACTTG < 41bp 0.510756430507178 0.849424684441438 0.46360272 0.4010466 prediction 0.677336507868521 Functional Gain - SLC24A1 ENSG00000074621 CDS Human protein_coding chr15:65918026 chr15:65918027 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_24507 0 0 0 0 0 Endoplasmic reticulum 0.438777271561691 0.432207733388714 0 0 hPsi_site_18231 iPseU_CNN:0;iRNA_PseU:0 18232 chr1 33138423 33138423 1 + C A UCEC 33138422 + 33138402 33138442 41 GTGGTCATACTGCCAAGATATCTGATTTCTCCTGGAATCCC GTGGTCATACTGCCAAGATATATGATTTCTCCTGGAATCCC < 41bp 0.503200365680803 0.841865373329819 0.39289495 0.6541435 prediction 0.677330015298032 Functional Gain - RBBP4 ENSG00000162521 CDS Human protein_coding chr1:33138422 chr1:33138423 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24508 0 0 1 0 2 Ribosome 0.438718592995102 0.438719037710243 0.308287 0 hPsi_site_18232 iPseU_CNN:0.308287;iRNA_PseU:0 18233 chr2 219563913 219563913 1 + C A LUAD 219563912 + 219563892 219563932 41 CGGCGCAATGTTGCATCAGCTCTGGGCAACTTGGGACCTGA CGGCGCAATGTTGCATCAGCTATGGGCAACTTGGGACCTGA < 41bp 0.485208835418392 0.83866498441351 0.34229493 0.4987497 prediction 0.67732996882702 Functional Gain - STK36 ENSG00000163482 CDS Human protein_coding chr2:219563912 chr2:219563913 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24509 0 0 1 0 0 chromatin 0.43871826312362 0.438559026905063 0 0 hPsi_site_18233 iPseU_CNN:0;iRNA_PseU:0 18234 chr16 84229443 84229443 1 + G A rs150949755 84229442 + 84229422 84229462 41 CTGCCCCCCACCTCGGAAGGTGGCCTCCCGCACAGCCCACC CTGCCCCCCACCTCGGAAGGTAGCCTCCCGCACAGCCCACC < 41bp 0.440908640866231 0.838660719882235 0.25555182 0.6560798 prediction 0.67732143976447 Functional Gain - ADAD2 ENSG00000140955 CDS Human protein_coding chr16:84229442 chr16:84229443 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_24510 0 0 0 0 1 exosome 0.438718592995101 0.43871859299469 0.3121596 0 hPsi_site_18234 iPseU_CNN:0.3121596;iRNA_PseU:0 18235 chr6 84233404 84233404 1 + C A UCEC 84233403 + 84233383 84233423 41 CTTTCTGAATTGGAGGATTATCTTTCCTATGAGACTGTCTT CTTTCTGAATTGGAGGATTATATTTCCTATGAGACTGTCTT < 41bp 0.494305111806915 0.838655886258915 0.25793946 0.27290845 prediction 0.67731177251783 Functional Gain - PRSS35 ENSG00000146250 CDS Human protein_coding chr6:84233403 chr6:84233404 nonsynonymous SNV 0.084 2 22 hPsi_associated_SNPs_24511 0 0 0 0 0 exosome 0.438718592914675 0.438718594233848 0 0 hPsi_site_18235 iPseU_CNN:0;iRNA_PseU:0 18236 chr2 233899296 233899296 1 + C A PAAD 233899295 + 233899275 233899315 41 GGAGTGCCAGGTGGCCGAAGTCGAGACTGGGGAGCAGAGGG GGAGTGCCAGGTGGCCGAAGTAGAGACTGGGGAGCAGAGGG < 41bp 0.501594456242352 0.840249543260856 0.4361676 0.61840355 prediction 0.677310174037008 Functional Gain - NEU2 ENSG00000115488 CDS Human protein_coding chr2:233899295 chr2:233899296 synonymous SNV . 0 22 hPsi_associated_SNPs_24512 0 0 0 0 0 exosome 0.438712079347046 0.438718592994201 0.2368071 0 hPsi_site_18236 iPseU_CNN:0.2368071;iRNA_PseU:0 18237 chr15 91025471 91025471 1 + G A BLCA 91025470 + 91025450 91025490 41 CAAAGTGCTGAAGGACTCGTTGCATGAGAAGTTCCCTGATG CAAAGTGCTGAAGGACTCGTTACATGAGAAGTTCCCTGATG < 41bp 0.433356662996826 0.838653179979342 0.52067417 0.84906226 prediction 0.677306359958685 Functional Gain - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91025470 chr15:91025471 synonymous SNV . 0 22 hPsi_associated_SNPs_24513 0 0 1 0 2 Nucleus 0.438718577485193 0.438718596331974 0.65677618 0 hPsi_site_18237 iPseU_CNN:0.65677618;iRNA_PseU:0 18238 chrX 140994092 140994092 1 + C A COAD 140994091 + 140994071 140994111 41 CTTTTGAGGGTTTTCCCCAGTCTCCTCTCCAGATTCCTGTG CTTTTGAGGGTTTTCCCCAGTATCCTCTCCAGATTCCTGTG < 41bp 0.488874208823257 0.838649705090546 0.21280795 0.32538015 prediction 0.677299410181092 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994091 chrX:140994092 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_24514 0 0 0 0 0 exosome 0.438718593273258 0.438718592005485 0 0 hPsi_site_18238 iPseU_CNN:0;iRNA_PseU:0 18239 chr20 31814775 31814775 1 + G A LIHC 31814774 + 31814754 31814794 41 GAAATCCTCGGGCAGCTGGATGTGAAACTGTTGAAAAGCCT GAAATCCTCGGGCAGCTGGATATGAAACTGTTGAAAAGCCT < 41bp 0.552213248210008 0.890861692130229 0.52496225 0.6877161 prediction 0.677296887840442 Functional Gain - BPIFA3 ENSG00000131059 CDS Human protein_coding chr20:31814774 chr20:31814775 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_24515 0 0 0 0 2 unknown 0.438685958741271 0.438703964889991 0.3255077 0 hPsi_site_18239 iPseU_CNN:0.3255077;iRNA_PseU:0 18240 chr6 87726017 87726017 1 + C A LUAD 87726016 + 87725996 87726036 41 GTCTGAGCATCTACACCGTGTCCTCGGAAGTGGCCGACTTT GTCTGAGCATCTACACCGTGTACTCGGAAGTGGCCGACTTT < 41bp 0.493164879878406 0.838648367205644 0.1989592 0.5878165 prediction 0.677296734411289 Functional Gain - HTR1E ENSG00000168830 CDS Human protein_coding chr6:87726016 chr6:87726017 nonsynonymous SNV 0.967 2 22 hPsi_associated_SNPs_24516 0 0 0 0 0 unknown 0.438718592980537 0.438718621716567 0.175633 0 hPsi_site_18240 iPseU_CNN:0.175633;iRNA_PseU:0 18241 chr7 128850231 128850231 1 + G A STAD 128850230 + 128850210 128850250 41 GGCCAATGTGACCATCGGGCTGCCCACCAAGCAGCCCATCC GGCCAATGTGACCATCGGGCTACCCACCAAGCAGCCCATCC < 41bp 0.420014598027322 0.838641632848161 0.16817352 0.5797399 prediction 0.677283265696322 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128850230 chr7:128850231 synonymous SNV . 0 22 hPsi_associated_SNPs_24517 0 0 1 0 1 cytosol 0.438718471521429 0.43871830838375 0.1594798 0 hPsi_site_18241 iPseU_CNN:0.1594798;iRNA_PseU:0 18242 chr9 131010999 131010999 1 + G A OV 131010998 + 131010978 131011018 41 CAAGACCGTGAGGGACCTCATGCCCAAGACCATCATGCACC CAAGACCGTGAGGGACCTCATACCCAAGACCATCATGCACC < 41bp 0.442445167464897 0.838634176630962 0.32442057 0.7083514 prediction 0.677268353261923 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010998 chr9:131010999 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_24518 0 0 1 2 1 Endoplasmic reticulum 0.438718584273338 0.438718491957484 0.4167028 0 hPsi_site_18242 iPseU_CNN:0.4167028;iRNA_PseU:0 18243 chr17 72339281 72339281 1 + C A UCEC 72339280 + 72339260 72339300 41 CAATGACATGGAGTATGAGGTCTCCATGTCCTACCTGGAGG CAATGACATGGAGTATGAGGTATCCATGTCCTACCTGGAGG < 41bp 0.478096249856598 0.838633340118936 0.24548277 0.62821716 prediction 0.677266680237871 Functional Gain - KIF19 ENSG00000196169 CDS Human protein_coding chr17:72339280 chr17:72339281 synonymous SNV . 0 22 hPsi_associated_SNPs_24519 0 0 0 0 1 exosome 0.438718988287312 0.438906405735546 0.25643432 0 hPsi_site_18243 iPseU_CNN:0.25643432;iRNA_PseU:0 18244 chr13 58207643 58207643 1 + G A UCEC 58207642 + 58207622 58207662 41 CGGGATGCTGGAGATTGACGTGCAGGCCCGAGACCTGGGGC CGGGATGCTGGAGATTGACGTACAGGCCCGAGACCTGGGGC < 41bp 0.433778524773591 0.83863259807317 0.3480358 0.8131448 prediction 0.677265196146339 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58207642 chr13:58207643 synonymous SNV . 0 22 hPsi_associated_SNPs_24520 0 0 0 0 0 exosome 0.438773758014395 0.438754506288955 0.6262896 0 hPsi_site_18244 iPseU_CNN:0.6262896;iRNA_PseU:0 18245 chr1 1120384 1120384 1 + G A LUSC 1120383 + 1120363 1120403 41 GAGCCCTCTGTACATGCTGCTGAAGGAGCACACGGTGTGGA GAGCCCTCTGTACATGCTGCTAAAGGAGCACACGGTGTGGA < 41bp 0.429913366000491 0.838628021687507 0.4540814 0.75525105 prediction 0.677256043375015 Functional Gain - TTLL10 ENSG00000162571 CDS Human protein_coding chr1:1120383 chr1:1120384 synonymous SNV . 0 22 hPsi_associated_SNPs_24521 0 0 0 0 1 exosome 0.43675500929132 0.439049951525317 0.5105021 0 hPsi_site_18245 iPseU_CNN:0.5105021;iRNA_PseU:0 18246 chr14 86087999 86087999 1 + C A UCEC 86087998 + 86087978 86088018 41 CCGCTGCGACAGGAACTTTGTCTACTGTAATGAGCGAAGCT CCGCTGCGACAGGAACTTTGTATACTGTAATGAGCGAAGCT < 41bp 0.51344638575612 0.852072426595442 0.36607388 0.3161363 prediction 0.677252081678645 Functional Gain - FLRT2 ENSG00000185070 CDS Human protein_coding chr14:86087998 chr14:86087999 synonymous SNV . 0 22 hPsi_associated_SNPs_24522 0 0 0 0 0 Ribosome 0.437532479862004 0.439466802258472 0 0 hPsi_site_18246 iPseU_CNN:0;iRNA_PseU:0 18247 chr3 30729913 30729913 1 + G A UCEC 30729912 + 30729892 30729932 41 GCCTCCATTTGGTTCCAAGGTGCGGGAGCACCCCTGTGTCG GCCTCCATTTGGTTCCAAGGTACGGGAGCACCCCTGTGTCG < 41bp 0.558062803338667 0.896678232383074 0.2757157 0.7593068 prediction 0.677230858088815 Functional Gain - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30729912 chr3:30729913 synonymous SNV . 0 22 hPsi_associated_SNPs_24523 0 0 1 0 2 Cytosol 0.438718592644682 0.438718594421558 0.5186136 0 hPsi_site_18247 iPseU_CNN:0.5186136;iRNA_PseU:0 18248 chr16 630905 630905 1 + G A SKCM 630904 + 630884 630924 41 GGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGC GGGCCTGATCCATCTGCTCGTAGACCTCATCAACTCCCTGC < 41bp 0.557822364972146 0.896433788054823 0.21076536 0.8914982 prediction 0.677222846165354 Functional Gain - PIGQ ENSG00000007541 CDS Human protein_coding chr16:630904 chr16:630905 synonymous SNV . 0 22 hPsi_associated_SNPs_24524 0 0 1 0 2 Ribosome 0.438717593783359 0.438712737708168 0.7829964 0 hPsi_site_18248 iPseU_CNN:0.7829964;iRNA_PseU:0 18249 chr11 55658890 55658890 1 + G A LUAD 55658889 + 55658869 55658909 41 GAGGAGGGACTCTTTCTTCTTGGATGTGTTAAGGAGGACAC GAGGAGGGACTCTTTCTTCTTAGATGTGTTAAGGAGGACAC < 41bp 0.4505810208841 0.838611359075975 0.2721178 0.3094902 prediction 0.677222718151951 Functional Gain - TRIM51 ENSG00000124900 CDS Human protein_coding chr11:55658889 chr11:55658890 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24525 0 0 0 0 0 unknown 0.438718589922207 0.438720052119224 0 0 hPsi_site_18249 iPseU_CNN:0;iRNA_PseU:0 18250 chr6 41318514 41318514 1 + C A LUSC 41318513 + 41318493 41318533 41 TCACGGACCTTCCCTGGACCTCAGTTTCCTCACCTGTAGAG TCACGGACCTTCCCTGGACCTAAGTTTCCTCACCTGTAGAG < 41bp 0.493611708355749 0.838611135388773 0.23120344 0.37290132 prediction 0.677222270777547 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41318513 chr6:41318514 stopgain 0.006 0 22 hPsi_associated_SNPs_24526 0 0 0 1 1 exosome 0.438718584685131 0.438718576182424 0 0 hPsi_site_18250 iPseU_CNN:0;iRNA_PseU:0 18251 chr1 207073688 207073688 1 + C A UCEC 207073687 + 207073667 207073707 41 CGGCTGCTGCAGCAGGAGGTTCTGCAGAACGTCTCGGTAAT CGGCTGCTGCAGCAGGAGGTTATGCAGAACGTCTCGGTAAT < 41bp 0.518550514202451 0.857154687103411 0.36856532 0.68077374 prediction 0.677208345801918 Functional Gain - IL24 ENSG00000162892 CDS Human protein_coding chr1:207073687 chr1:207073688 nonsynonymous SNV 0.736 3 22 hPsi_associated_SNPs_24527 0 0 0 1 2 Cytosol 0.438718592515045 0.438718583886493 0.36154748 0 hPsi_site_18251 iPseU_CNN:0.36154748;iRNA_PseU:0 18252 chr5 93999553 93999553 1 + G A COAD 93999552 + 93999532 93999572 41 AATTGAGGAACTTTCCACTTTGCAGGCACATTATATCCCTC AATTGAGGAACTTTCCACTTTACAGGCACATTATATCCCTC < 41bp 0.550208827073469 0.888806773662648 0.3580777 0.6088795 prediction 0.677195893178357 Functional Gain - SLF1 ENSG00000133302 CDS Human protein_coding chr5:93999552 chr5:93999553 synonymous SNV . 0 22 hPsi_associated_SNPs_24528 0 0 1 0 2 Cytosol 0.438718593178916 0.438718592995102 0.217759 0 hPsi_site_18252 iPseU_CNN:0.217759;iRNA_PseU:0 18253 chr19 44223731 44223731 1 + G A UCEC 44223730 + 44223710 44223750 41 CTGGCCAACGAGGTCTCGCCTGAGACTGTCCTGCGGCTCTA CTGGCCAACGAGGTCTCGCCTAAGACTGTCCTGCGGCTCTA < 41bp 0.546505209026978 0.885101357834275 0.39537144 0.5528023 prediction 0.677192297614594 Functional Gain - IRGC ENSG00000124449 CDS Human protein_coding chr19:44223730 chr19:44223731 nonsynonymous SNV 0.710 0 22 hPsi_associated_SNPs_24529 0 0 0 0 0 unknown 0.438716011382065 0.43871859309892 0.1056046 0 hPsi_site_18253 iPseU_CNN:0.1056046;iRNA_PseU:0 18254 chr11 380393 380393 1 + C A LUSC 380392 + 380372 380412 41 CGTGGAGGGCAGGCTGGCCTTCGCGCCCGTGGTCATGCGCC CGTGGAGGGCAGGCTGGCCTTAGCGCCCGTGGTCATGCGCC < 41bp 0.504582681447748 0.843177997461529 0.18195814 0.3655552 prediction 0.677190632027562 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:380392 chr11:380393 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_24530 0 0 0 0 1 chromatin 0.438166570858139 0.43839165308539 0 0 hPsi_site_18254 iPseU_CNN:0;iRNA_PseU:0 18255 chr8 144804378 144804378 1 + C A BLCA 144804377 + 144804357 144804397 41 CCTACGGGACTGTCTGCCACTCGGCACTGGGCCACCTGCCC CCTACGGGACTGTCTGCCACTAGGCACTGGGCCACCTGCCC < 41bp 0.507101397737917 0.845695698550628 0.13217655 0.26657912 prediction 0.677188601625423 Functional Gain - MAPK15 ENSG00000181085 CDS Human protein_coding chr8:144804377 chr8:144804378 stopgain 0.804 0 22 hPsi_associated_SNPs_24531 0 0 0 0 0 chromatin 0.438718358534412 0.43871858435031 0 0 hPsi_site_18255 iPseU_CNN:0;iRNA_PseU:0 Trans fatty acid levels 18256 chr19 45774827 45774827 1 + G T LUAD 45774826 + 45774806 45774846 41 GATCGAAGCTGGACACGTTCTGCGGGAGCCCCCCATATGCC GATCGAAGCTGGACACGTTCTTCGGGAGCCCCCCATATGCC < 41bp 0.497066443816801 0.838594209862662 0.27725047 0.69057715 prediction 0.677188419725324 Functional Gain - MARK4 ENSG00000007047 CDS Human protein_coding chr19:45774826 chr19:45774827 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_24532 0 0 1 0 1 Nucleus 0.438707081401954 0.438718606200878 0.3811543 0 hPsi_site_18256 iPseU_CNN:0.3811543;iRNA_PseU:0 18257 chr15 22872451 22872451 1 + C A UCEC 22872450 + 22872430 22872470 41 TTTAAAAACTGCCATATGTTTCTTGTAACCATTTTAAACAA TTTAAAAACTGCCATATGTTTATTGTAACCATTTTAAACAA < 41bp 0.495962135288565 0.838591079664568 0.3082353 0.30193907 prediction 0.677182159329136 Functional Gain - TUBGCP5 ENSG00000153575 CDS Human other chr15:22872450 chr15:22872451 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_24533 0 0 1 0 2 chromatin 0.411565393423245 0.43796647896018 0 0 hPsi_site_18257 iPseU_CNN:0;iRNA_PseU:0 18258 chr12 54967229 54967229 1 + G A SKCM 54967228 + 54967208 54967248 41 ATTGATGCAGGATGATGAGATGAACATTTTCATCAACCTCA ATTGATGCAGGATGATGAGATAAACATTTTCATCAACCTCA < 41bp 0.430304675424279 0.838588406882569 0.29320198 0.4303537 prediction 0.677176813765138 Functional Gain - PDE1B ENSG00000123360 CDS Human protein_coding chr12:54967228 chr12:54967229 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24534 0 0 0 0 2 exosome 0.435323803546161 0.438984687116536 0 0 hPsi_site_18258 iPseU_CNN:0;iRNA_PseU:0 18259 chr11 59224871 59224871 1 + G A LUAD 59224870 + 59224850 59224890 41 GGTGTGGGTGGCCTTGGTGGTGGCTTCTTGGGTGAGTGGTG GGTGTGGGTGGCCTTGGTGGTAGCTTCTTGGGTGAGTGGTG < 41bp 0.548818590333319 0.887402092637354 0.3019274 0.41371524 prediction 0.67716700460807 Functional Gain - OR4D6 ENSG00000166884 CDS Human protein_coding chr11:59224870 chr11:59224871 synonymous SNV . 0 22 hPsi_associated_SNPs_24535 0 0 0 0 0 unknown 0.43871074549391 0.438718578384299 0 0 hPsi_site_18259 iPseU_CNN:0;iRNA_PseU:0 18260 chr3 184019379 184019379 1 + G A CESC 184019378 + 184019358 184019398 41 ATGACCATGAGTGGGGAGCGTGAGTGCCTCAAGTATCGGCT ATGACCATGAGTGGGGAGCGTAAGTGCCTCAAGTATCGGCT < 41bp 0.557264475194165 0.895840220341112 0.23603249 0.36992064 prediction 0.677151490293893 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184019378 chr3:184019379 nonsynonymous SNV 0.892 1 22 hPsi_associated_SNPs_24536 0 0 1 0 1 Ribosome 0.438718593856044 0.438718591550594 0 0 hPsi_site_18260 iPseU_CNN:0;iRNA_PseU:0 18261 chr11 55135837 55135837 1 + G A OV 55135836 + 55135816 55135856 41 GCCATCTGTAAGCCTCTTCATGAATTGATCACCATGAATCG GCCATCTGTAAGCCTCTTCATAAATTGATCACCATGAATCG < 41bp 0.461032276282935 0.8385743393764 0.24119979 0.39932302 prediction 0.677148678752799 Functional Gain - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55135836 chr11:55135837 nonsynonymous SNV 0.568 2 22 hPsi_associated_SNPs_24537 0 0 0 0 0 unknown 0.438833816432342 0.438919104100988 0 0 hPsi_site_18261 iPseU_CNN:0;iRNA_PseU:0 18262 chr16 29802078 29802078 1 + G A rs144408025 29802077 + 29802057 29802097 41 AGGCGGGCCCAAGGAGGGAGTGGAATGGCCGCGGGCGGCTC AGGCGGGCCCAAGGAGGGAGTAGAATGGCCGCGGGCGGCTC < 41bp 0.528750374121421 0.867323048113671 0.3410552 0.46322867 prediction 0.677145347984501 Functional Gain - KIF22 ENSG00000079616 UTR5 Human protein_coding chr16:29802077 chr16:29802078 . . 0 22 hPsi_associated_SNPs_24538 1 0 1 0 1 Cytosol 0.438718592995102 0.438718592995069 0 0 hPsi_site_18262 iPseU_CNN:0;iRNA_PseU:0 18263 chr12 52284387 52284387 1 + G A SKCM 52284386 + 52284366 52284406 41 AGGTGCTGACCTGACAGCAGTGGACCCTGTTCGGGGCAAGA AGGTGCTGACCTGACAGCAGTAGACCCTGTTCGGGGCAAGA < 41bp 0.532011890022807 0.870582120097341 0.26410836 0.66934 prediction 0.677140460149068 Functional Gain - ANKRD33 ENSG00000167612 CDS Human protein_coding chr12:52284386 chr12:52284387 synonymous SNV . 0 22 hPsi_associated_SNPs_24539 0 0 0 0 1 unknown 0.43874439974887 0.438739934383435 0.33868 0 hPsi_site_18263 iPseU_CNN:0.33868;iRNA_PseU:0 18264 chr1 152770614 152770614 1 + G A BLCA 152770613 + 152770593 152770633 41 AGCACTCTGGAGGCTGCTGCTGAAGTGGACCTTGACTTCCT AGCACTCTGGAGGCTGCTGCTAAAGTGGACCTTGACTTCCT < 41bp 0.478229142711901 0.838552373530868 0.27969372 0.50572604 prediction 0.677104747061737 Functional Gain - LCE1D ENSG00000172155 CDS Human protein_coding chr1:152770613 chr1:152770614 synonymous SNV . 0 22 hPsi_associated_SNPs_24540 0 0 0 0 0 unknown 0.438718658453686 0.438718590696196 0.01145208 0 hPsi_site_18264 iPseU_CNN:0.01145208;iRNA_PseU:0 18265 chr2 232672337 232672337 1 + G A rs34357497 232672336 + 232672316 232672356 41 GATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAGG GATGTCCAAAGTGAAAGGTCTAGTCTCCAGCCGCCACTAGG < 41bp 0.446160412386903 0.838547433691501 0.2665236 0.80084264 prediction 0.677094867383001 Functional Gain - COPS7B ENSG00000144524 CDS Human protein_coding chr2:232672336 chr2:232672337 synonymous SNV . 0 22 hPsi_associated_SNPs_24541 0 0 1 0 0 Ribosome 0.43726352674422 0.43871970203363 0.60168528 0 hPsi_site_18265 iPseU_CNN:0.60168528;iRNA_PseU:0 18266 chr13 113783828 113783828 1 + C A UCEC 113783827 + 113783807 113783847 41 GTCACGAGGGCCAATTCCTTTCTTGAAGAGATGAAGAAAGG GTCACGAGGGCCAATTCCTTTATTGAAGAGATGAAGAAAGG < 41bp 0.525579077070795 0.864125700166953 0.6757717 0.47836468 prediction 0.677093246192317 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113783827 chr13:113783828 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_24542 0 0 0 0 1 nucleus 0.438718593041501 0.438718592995077 0 0 hPsi_site_18266 iPseU_CNN:0;iRNA_PseU:0 18267 chr5 102513595 102513595 1 + G A LUAD 102513594 + 102513574 102513614 41 TCAGAAGAACGCTTTCATGTTGAATTACACTTTAGTCCGGG TCAGAAGAACGCTTTCATGTTAAATTACACTTTAGTCCGGG < 41bp 0.452680197867395 0.838544411715385 0.36715955 0.76283956 prediction 0.67708882343077 Functional Gain - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102513594 chr5:102513595 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_24543 0 0 1 0 2 Cytosol 0.438718217568634 0.438718526306388 0.52567912 0 hPsi_site_18267 iPseU_CNN:0.52567912;iRNA_PseU:0 18268 chr22 41783616 41783616 1 + C A UCEC 41783615 + 41783595 41783635 41 CTGCCAGCTCTTCCACAGCATCCCCACCATCCTCCTCCACT CTGCCAGCTCTTCCACAGCATACCCACCATCCTCCTCCACT < 41bp 0.518227332011734 0.856771702573722 0.20376563 0.7422788 prediction 0.677088741123977 Functional Gain - TEF ENSG00000167074 CDS Human protein_coding chr22:41783615 chr22:41783616 nonsynonymous SNV 0.383 1 22 hPsi_associated_SNPs_24544 0 0 0 0 1 cytosol 0.438698975104526 0.438717843922415 0.4845576 0 hPsi_site_18268 iPseU_CNN:0.4845576;iRNA_PseU:0 18269 chrX 102968903 102968903 1 + G A UCEC 102968902 + 102968882 102968922 41 CTGCTTCTGCTTTTTATTATTGTCTTCATTCTGATCTTCTT CTGCTTCTGCTTTTTATTATTATCTTCATTCTGATCTTCTT < 41bp 0.511878417584384 0.850421544750683 0.38874042 0.61825496 prediction 0.677086254332598 Functional Gain - TMEM31 ENSG00000179363 CDS Human protein_coding chrX:102968902 chrX:102968903 nonsynonymous SNV 0.111 1 22 hPsi_associated_SNPs_24545 0 0 0 0 0 exosome 0.438874616135067 0.438441541962482 0.23650992 0 hPsi_site_18269 iPseU_CNN:0.23650992;iRNA_PseU:0 18270 chr14 24843060 24843060 1 + G A STAD 24843059 + 24843039 24843079 41 CTCAGTACAGGCAGCATCGGTGCCCATCGAGTGCTGTGAGC CTCAGTACAGGCAGCATCGGTACCCATCGAGTGCTGTGAGC < 41bp 0.48363487613003 0.838542401763998 0.38826185 0.64888775 prediction 0.677084803527995 Functional Gain - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24843059 chr14:24843060 synonymous SNV . 0 22 hPsi_associated_SNPs_24546 0 0 1 0 1 cytosol 0.438756749255076 0.438759316682199 0.2977755 0 hPsi_site_18270 iPseU_CNN:0.2977755;iRNA_PseU:0 18271 chr2 100007088 100007088 1 + G A BLCA 100007087 + 100007067 100007107 41 AAGGAAGGAGATACAATCATTGTTCCTGGAGTAGAAGGGCC AAGGAAGGAGATACAATCATTATTCCTGGAGTAGAAGGGCC < 41bp 0.447288439503443 0.83853452809837 0.24197218 0.3068869 prediction 0.677069056196739 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:100007087 chr2:100007088 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24547 0 0 1 0 2 Ribosome 0.438718592995336 0.438718593032598 0 0 hPsi_site_18271 iPseU_CNN:0;iRNA_PseU:0 18272 chr9 115421560 115421560 1 + G A PAAD 115421559 + 115421539 115421579 41 TGAGATCCCTGCAGTGAAGTTGAACGAGCTGCTCGAGAACT TGAGATCCCTGCAGTGAAGTTAAACGAGCTGCTCGAGAACT < 41bp 0.445993462755033 0.838524685178272 0.3099249 0.46635723 prediction 0.677049370356544 Functional Gain - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115421559 chr9:115421560 synonymous SNV . 0 22 hPsi_associated_SNPs_24548 0 0 1 0 1 Nucleus 0.438882701516366 0.438790234275117 0 0 hPsi_site_18272 iPseU_CNN:0;iRNA_PseU:0 18273 chr19 11144143 11144143 1 + G A LUSC 11144142 + 11144122 11144162 41 GACCAGAAGTCCTCCAGCCATGAGCGGCGCGCCTTCCTGCA GACCAGAAGTCCTCCAGCCATAAGCGGCGCGCCTTCCTGCA < 41bp 0.447982693615681 0.838523139102426 0.18558249 0.28618884 prediction 0.677046278204852 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11144142 chr19:11144143 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_24549 0 0 1 0 1 Nucleus 0.43871996666837 0.438702816601054 0 0 hPsi_site_18273 iPseU_CNN:0;iRNA_PseU:0 18274 chr7 143029880 143029880 1 + G A SKCM 143029879 + 143029859 143029899 41 ACATGGGTGAAACACGCGGGTGATCCTGAGAGCCTGGGCCA ACATGGGTGAAACACGCGGGTAATCCTGAGAGCCTGGGCCA < 41bp 0.424645487913668 0.83852143555149 0.16508472 0.7203537 prediction 0.67704287110298 Functional Gain - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143029879 chr7:143029880 nonsynonymous SNV 0.112 4 22 hPsi_associated_SNPs_24550 0 0 0 0 2 exosome 0.43881599389691 0.438472640501667 0.4407074 0 hPsi_site_18274 iPseU_CNN:0.4407074;iRNA_PseU:0 18275 chr10 71264203 71264203 1 + G A rs192757129 71264202 + 71264182 71264222 41 TTTCCATTTCAGACAGAAGTTGTCAACACCATGTGTGGCTA TTTCCATTTCAGACAGAAGTTATCAACACCATGTGTGGCTA < 41bp 0.449842987622138 0.838515509648271 0.29207915 0.50770515 prediction 0.677031019296541 Functional Gain - TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71264202 chr10:71264203 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_24551 0 0 0 0 2 Cytosol 0.452567910947638 0.493504924494584 0.0154103000000001 0 hPsi_site_18275 iPseU_CNN:0.0154103000000001;iRNA_PseU:0 18276 chr8 48352938 48352938 1 + G A UCEC 48352937 + 48352917 48352957 41 TTAGAGCTGCATGAGGAATGTGCCATGCAAGTTGCCATGTG TTAGAGCTGCATGAGGAATGTACCATGCAAGTTGCCATGTG < 41bp 0.512679621786586 0.851190961285645 0.26204455 0.8101784 prediction 0.677022678998118 Functional Gain - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48352937 chr8:48352938 nonsynonymous SNV 0.107 0 22 hPsi_associated_SNPs_24552 0 0 1 2 0 Ribosome 0.444500970643437 0.423191941828321 0.6203568 0 hPsi_site_18276 iPseU_CNN:0.6203568;iRNA_PseU:0 18277 chr9 34993317 34993317 1 + G A BLCA 34993316 + 34993296 34993336 41 AGCCTACCGGAAGATGGCCTTGAAGTACCACCCAGACAAGA AGCCTACCGGAAGATGGCCTTAAAGTACCACCCAGACAAGA < 41bp 0.562316641002717 0.900824716075696 0.31133288 0.6285943 prediction 0.677016150145958 Functional Gain - DNAJB5 ENSG00000137094 CDS Human protein_coding chr9:34993316 chr9:34993317 synonymous SNV . 0 22 hPsi_associated_SNPs_24553 0 0 0 0 0 exosome 0.438718592995093 0.438718592896979 0.2571886 0 hPsi_site_18277 iPseU_CNN:0.2571886;iRNA_PseU:0 Multiple complex diseases 18278 chr11 120097576 120097576 1 + C A UCEC 120097575 + 120097555 120097595 41 GAGGTTCGGGGTCTGGAGCATCTGCACATGGATGTCGCTGT GAGGTTCGGGGTCTGGAGCATATGCACATGGATGTCGCTGT < 41bp 0.515727647761301 0.854234023706384 0.35162508 0.6478609 prediction 0.677012751890167 Functional Gain - OAF ENSG00000184232 CDS Human protein_coding chr11:120097575 chr11:120097576 nonsynonymous SNV 0.830 0 22 hPsi_associated_SNPs_24554 0 0 1 0 1 Endoplasmic reticulum 0.438718641099652 0.438713497850787 0.2957218 0 hPsi_site_18278 iPseU_CNN:0.2957218;iRNA_PseU:0 18279 chr5 179251229 179251229 1 + C A GBM 179251228 + 179251208 179251248 41 GAAGGTGAAACACGGACACTTCGGGTGGCCAGGATGGGAAA GAAGGTGAAACACGGACACTTAGGGTGGCCAGGATGGGAAA < 41bp 0.471704179383949 0.838505363586474 0.26318398 0.2699647 prediction 0.677010727172948 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179251228 chr5:179251229 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24555 0 0 1 0 2 Ribosome 0.438962615806184 0.440208329398113 0 0 hPsi_site_18279 iPseU_CNN:0;iRNA_PseU:0 18280 chr17 48628478 48628478 1 + G A rs201835165 48628477 + 48628457 48628497 41 GACCTTGCTCAATTCAGGGCTGGAGAAGCTCTTCCAGGCCC GACCTTGCTCAATTCAGGGCTAGAGAAGCTCTTCCAGGCCC < 41bp 0.559464556076416 0.897968513029798 0.3960931 0.4842306 prediction 0.677007913906764 Functional Gain - SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48628477 chr17:48628478 synonymous SNV . 0 22 hPsi_associated_SNPs_24556 0 0 1 0 1 nucleus 0.438718592820383 0.438625005141093 0 0 hPsi_site_18280 iPseU_CNN:0;iRNA_PseU:0 18281 chr1 228238415 228238415 1 + G A rs201868384 228238414 + 228238394 228238434 41 AGCCGGTGTGGCCTTTGCAGTGACACGCTCATGTGCAGAAG AGCCGGTGTGGCCTTTGCAGTAACACGCTCATGTGCAGAAG < 41bp 0.431132512057648 0.838499003181345 0.32331228 0.5609024 prediction 0.67699800636269 Functional Gain - WNT3A ENSG00000154342 CDS Human protein_coding chr1:228238414 chr1:228238415 synonymous SNV . 0 22 hPsi_associated_SNPs_24557 0 0 0 0 1 exosome 0.43883553434593 0.43853815940277 0.1218048 0 hPsi_site_18281 iPseU_CNN:0.1218048;iRNA_PseU:0 18282 chr16 58076234 58076234 1 + G A THYM 58076233 + 58076213 58076253 41 CTGCCCGGTGACATCAGTGCTGCCTACGAGCGCCAAGACGG CTGCCCGGTGACATCAGTGCTACCTACGAGCGCCAAGACGG < 41bp 0.426995242603343 0.838496704425102 0.20280442 0.61181784 prediction 0.676993408850204 Functional Gain - MMP15 ENSG00000102996 CDS Human protein_coding chr16:58076233 chr16:58076234 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_24558 0 0 1 0 2 Ribosome 0.438558487509521 0.42415038809408 0.22363568 0 hPsi_site_18282 iPseU_CNN:0.22363568;iRNA_PseU:0 18283 chr1 100534090 100534090 1 + C A CESC 100534089 + 100534069 100534109 41 TCTGCATTACAGTGTTTCTCTCCTACCTACCGGAGGCAGGC TCTGCATTACAGTGTTTCTCTACTACCTACCGGAGGCAGGC < 41bp 0.503580374660618 0.842076390817387 0.19273233 0.27102613 prediction 0.676992032313539 Functional Gain - MFSD14A ENSG00000156875 CDS Human protein_coding chr1:100534089 chr1:100534090 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_24559 0 0 1 0 2 Endoplasmic reticulum 0.438718593666497 0.43871872480553 0 0 hPsi_site_18283 iPseU_CNN:0;iRNA_PseU:0 18284 chr16 19078994 19078994 1 + G A SKCM 19078993 + 19078973 19079013 41 TTTTAGTTCCGGCAATGAGTTGCGCCGGGGCGGCGGCGGCT TTTTAGTTCCGGCAATGAGTTACGCCGGGGCGGCGGCGGCT < 41bp 0.538728016243028 0.877222744843694 0.2741289 0.7402567 prediction 0.676989457201331 Functional Gain - COQ7 ENSG00000167186 CDS Human protein_coding chr16:19078993 chr16:19078994 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_24560 0 0 1 0 1 Ribosome 0.438717738749564 0.438718627383988 0.4805134 0 hPsi_site_18284 iPseU_CNN:0.4805134;iRNA_PseU:0 18285 chr1 158577008 158577008 1 + G A LUSC 158577007 + 158576987 158577027 41 CTGTGCTTCCTTCGTGTACCTGAGGCCCAAAGCCAGCTACT CTGTGCTTCCTTCGTGTACCTAAGGCCCAAAGCCAGCTACT < 41bp 0.462860685714925 0.838488780082118 0.17367479 0.3438783 prediction 0.676977560164236 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158577007 chr1:158577008 synonymous SNV . 0 22 hPsi_associated_SNPs_24561 0 0 0 0 0 unknown 0.438718593163674 0.438718602893242 0 0 hPsi_site_18285 iPseU_CNN:0;iRNA_PseU:0 18286 chrX 16168665 16168665 1 + C A UCEC 16168664 + 16168644 16168684 41 TTCTATGGCTTCCTTTCTGGTCTTCTACGTCATTCCACTGT TTCTATGGCTTCCTTTCTGGTATTCTACGTCATTCCACTGT < 41bp 0.515381177650925 0.853865859172323 0.3035943 0.7432376 prediction 0.676969363042797 Functional Gain - GRPR ENSG00000126010 CDS Human protein_coding chrX:16168664 chrX:16168665 synonymous SNV . 0 22 hPsi_associated_SNPs_24562 0 0 0 0 0 chromatin 0.438718592990148 0.43871859299361 0.4864752 0 hPsi_site_18286 iPseU_CNN:0.4864752;iRNA_PseU:0 18287 chr19 8953754 8953754 1 + G A UCEC 8953753 + 8953733 8953773 41 GATGCGGTGGAGATAATTCCTGCAGAGGGAGTGGGTATCTC GATGCGGTGGAGATAATTCCTACAGAGGGAGTGGGTATCTC < 41bp 0.541108085526073 0.879589733839815 0.19691682 0.24795553 prediction 0.676963296627485 Functional Gain - MBD3L1 ENSG00000170948 CDS Human protein_coding chr19:8953753 chr19:8953754 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24563 0 0 0 0 0 nucleus 0.438718592995102 0.438718593003513 0 0 hPsi_site_18287 iPseU_CNN:0;iRNA_PseU:0 18288 chr16 27374408 27374408 1 + G A rs3024677 27374407 + 27374387 27374427 41 ACCAGTGGCTATCAGGAGTTTGTACATGCGGTGGAGCAGGG ACCAGTGGCTATCAGGAGTTTATACATGCGGTGGAGCAGGG < 41bp 0.439736836836251 0.838478767899339 0.3398468 0.46999064 prediction 0.676957535798678 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374407 chr16:27374408 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24564 0 0 0 0 0 Endoplasmic reticulum 0.438718516807227 0.438718557686311 0 0 hPsi_site_18288 iPseU_CNN:0;iRNA_PseU:0 18289 chr7 89791267 89791267 1 + G A LUSC 89791266 + 89791246 89791286 41 GATGCCTGGATTGAGCATGATGTTTGGAGAATGGAGATTTA GATGCCTGGATTGAGCATGATATTTGGAGAATGGAGATTTA < 41bp 0.437566328495171 0.838476322671041 0.38831297 0.41455632 prediction 0.676952645342081 Functional Gain - STEAP1 ENSG00000164647 CDS Human protein_coding chr7:89791266 chr7:89791267 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24565 0 0 0 0 1 Endoplasmic reticulum 0.438785975731748 0.438729246243544 0 0 hPsi_site_18289 iPseU_CNN:0;iRNA_PseU:0 18290 chr9 34996453 34996453 1 + G A COAD 34996452 + 34996432 34996472 41 GACATGGATGTGGATGAAGATGAGGACCCATTTGGCGCTTT GACATGGATGTGGATGAAGATAAGGACCCATTTGGCGCTTT < 41bp 0.562900399690684 0.901376719332481 0.27273387 0.61792 prediction 0.676952639283595 Functional Gain - DNAJB5 ENSG00000137094 CDS Human protein_coding chr9:34996452 chr9:34996453 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24566 0 0 0 0 0 exosome 0.438718657365442 0.440078981549225 0.23584 0 hPsi_site_18290 iPseU_CNN:0.23584;iRNA_PseU:0 18291 chr12 95228583 95228583 1 + G A LUAD 95228582 + 95228562 95228602 41 CACCAGCTGGACTGAGGAACTGAACCAGGAGGTCACTGGCC CACCAGCTGGACTGAGGAACTAAACCAGGAGGTCACTGGCC < 41bp 0.475511913016081 0.83847521367031 0.2581579 0.5190456 prediction 0.676950427340619 Functional Gain - KRT19P2 ENSG00000216306 ncRNA_exonic Human transcribed_processed_pseudogene chr12:95228582 chr12:95228583 . . 0 22 hPsi_associated_SNPs_24567 0 0 0 0 0 unknown 0.438705109059646 0.437300546044097 0.0380912 0 hPsi_site_18291 iPseU_CNN:0.0380912;iRNA_PseU:0 18292 chrX 153418468 153418468 1 + G A rs731614 153418467 + 153418447 153418487 41 CTGGGAGAGGTGGCTGGTGGTGTGCAAGCCCTTTGGCAATG CTGGGAGAGGTGGCTGGTGGTATGCAAGCCCTTTGGCAATG < 41bp 0.560796983711016 0.899260159624551 0.22119424 0.47274536 prediction 0.67692635182707 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153418467 chrX:153418468 synonymous SNV . 0 22 hPsi_associated_SNPs_24568 0 0 0 0 1 unknown 0.438697650018924 0.438561121187972 0 0 hPsi_site_18292 iPseU_CNN:0;iRNA_PseU:0 18293 chr4 57181776 57181776 1 + G A LUAD 57181775 + 57181755 57181795 41 AGTCCACTCCCAGGGGCCGGTGTGATTCCCGCGGGAACCAA AGTCCACTCCCAGGGGCCGGTATGATTCCCGCGGGAACCAA < 41bp 0.436134951525905 0.838460759557563 0.44923025 0.7510587 prediction 0.676921519115127 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57181775 chr4:57181776 nonsynonymous SNV 0.331 2 22 hPsi_associated_SNPs_24569 0 0 0 0 0 cytosol 0.4387185929951 0.438718592993826 0.5021174 0 hPsi_site_18293 iPseU_CNN:0.5021174;iRNA_PseU:0 18294 chr10 90572892 90572892 1 + G A LUSC 90572891 + 90572871 90572911 41 TTACTGCAGCATGGCCTAGTTGGAGGTGCTAGCAACTGGAT TTACTGCAGCATGGCCTAGTTAGAGGTGCTAGCAACTGGAT < 41bp 0.432225351974088 0.838460652752073 0.21441546 0.41444868 prediction 0.676921305504147 Functional Gain - LIPM ENSG00000173239 CDS Human protein_coding chr10:90572891 chr10:90572892 nonsynonymous SNV 0.038 4 22 hPsi_associated_SNPs_24570 0 0 0 0 1 exosome 0.438718592995102 0.438718573730443 0 0 hPsi_site_18294 iPseU_CNN:0;iRNA_PseU:0 18295 chr10 101716582 101716582 1 + G A SKCM 101716581 + 101716561 101716601 41 CATTAACAATGCAGTCATCTTGATTTCCAGAACTTACTGAC CATTAACAATGCAGTCATCTTAATTTCCAGAACTTACTGAC < 41bp 0.538460815499871 0.876919564888696 0.17024925 0.28247446 prediction 0.676917498777651 Functional Gain - DNMBP ENSG00000107554 CDS Human protein_coding chr10:101716581 chr10:101716582 stopgain 0.002 0 22 hPsi_associated_SNPs_24571 0 0 0 0 1 Nucleus 0.449522590100711 0.438688088897084 0 0 hPsi_site_18295 iPseU_CNN:0;iRNA_PseU:0 18296 chr1 53236924 53236924 1 + G A BLCA 53236923 + 53236903 53236943 41 GAATCTCCAGTGCCTGGTGCTGAATTCATTAACTCTCTCCC GAATCTCCAGTGCCTGGTGCTAAATTCATTAACTCTCTCCC < 41bp 0.432025407275163 0.838456337378461 0.33696735 0.7364214 prediction 0.676912674756921 Functional Gain - ZYG11B ENSG00000162378 CDS Human protein_coding chr1:53236923 chr1:53236924 synonymous SNV . 0 22 hPsi_associated_SNPs_24572 0 0 1 4 0 Ribosome 0.438920613742358 0.438716138264583 0.4728428 0 hPsi_site_18296 iPseU_CNN:0.4728428;iRNA_PseU:0 18297 chr17 30814982 30814982 1 + C A BLCA 30814981 + 30814961 30815001 41 CACCCCCGGCCAGCCAGCTCTCGGGTTCCCAGACCGGGGGC CACCCCCGGCCAGCCAGCTCTAGGGTTCCCAGACCGGGGGC < 41bp 0.480719393541488 0.838449984403017 0.28467315 0.36401728 prediction 0.676899968806035 Functional Gain - CDK5R1 ENSG00000176749 CDS Human protein_coding chr17:30814981 chr17:30814982 stopgain 0.958 0 22 hPsi_associated_SNPs_24573 0 0 0 0 0 chromatin 0.438717933916761 0.43872486992686 0 0 hPsi_site_18297 iPseU_CNN:0;iRNA_PseU:0 18298 chr2 29404570 29404570 1 + G A rs79008307 29404569 + 29404549 29404589 41 GATGGGTACTGTTAGGTATGTGGGCCCCACTGACTTTGCTT GATGGGTACTGTTAGGTATGTAGGCCCCACTGACTTTGCTT < 41bp 0.442891863363818 0.838446459560511 0.1728181 0.68516725 prediction 0.676892919121022 Functional Gain - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29404569 chr2:29404570 synonymous SNV . 0 22 hPsi_associated_SNPs_24574 0 0 1 0 0 nucleus 0.438718592995102 0.438717501389234 0.3703345 0 hPsi_site_18298 iPseU_CNN:0.3703345;iRNA_PseU:0 18299 chr16 1712618 1712618 1 + C A UCEC 1712617 + 1712597 1712637 41 CAGCCGACACGGGAAGCTCTTCTCTCCCAGTAAAGAAGCAG CAGCCGACACGGGAAGCTCTTATCTCCCAGTAAAGAAGCAG < 41bp 0.476760436483936 0.83843909505131 0.40681776 0.6810296 prediction 0.676878190102621 Functional Gain - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1712617 chr16:1712618 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_24575 0 0 1 0 0 chromatin 0.438722054976185 0.43873317812547 0.3620592 0 hPsi_site_18299 iPseU_CNN:0.3620592;iRNA_PseU:0 18300 chr14 20389194 20389194 1 + C A UCEC 20389193 + 20389173 20389213 41 GAGCCGAAGGACATGCACTGTCTTGGTAATGATCTCCTGGG GAGCCGAAGGACATGCACTGTATTGGTAATGATCTCCTGGG < 41bp 0.501971617390933 0.840408925917466 0.25472465 0.49501234 prediction 0.676874617053066 Functional Gain - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20389193 chr14:20389194 synonymous SNV . 0 22 hPsi_associated_SNPs_24576 0 0 0 0 0 unknown 0.438717842725969 0.438943491808357 0 0 hPsi_site_18300 iPseU_CNN:0;iRNA_PseU:0 18301 chr20 31825902 31825902 1 + C A COAD 31825901 + 31825881 31825921 41 TCTGGGGGCCTGTTGGGCATTCTGGAAAACCTTCCGCTCCT TCTGGGGGCCTGTTGGGCATTATGGAAAACCTTCCGCTCCT < 41bp 0.528647322436572 0.867078946684693 0.5074838 0.6089115 prediction 0.67686324849624 Functional Gain - BPIFA1 ENSG00000198183 CDS Human protein_coding chr20:31825901 chr20:31825902 nonsynonymous SNV 0.858 3 22 hPsi_associated_SNPs_24577 0 0 0 0 1 unknown 0.438718592952281 0.438718592994999 0.2028554 0 hPsi_site_18301 iPseU_CNN:0.2028554;iRNA_PseU:0 18302 chr1 70887300 70887300 1 + C A UCEC 70887299 + 70887279 70887319 41 CTGAATTTGGATTAAAGATTTCTTTTGTTGATTGTTCCAAA CTGAATTTGGATTAAAGATTTATTTTGTTGATTGTTCCAAA < 41bp 0.50264660904098 0.841075678115728 0.26056784 0.25164545 prediction 0.676858138149496 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70887299 chr1:70887300 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_24578 0 0 1 2 2 Cytosol 0.438718591874806 0.438718589556247 0 0 hPsi_site_18302 iPseU_CNN:0;iRNA_PseU:0 18303 chr11 5631384 5631384 1 + C A STAD 5631383 + 5631363 5631403 41 TGTCCTTTCTAGGAGTGAGTTCTGGACCCTGAGGAAGCCAG TGTCCTTTCTAGGAGTGAGTTATGGACCCTGAGGAAGCCAG < 41bp 0.489564045934585 0.838425668945942 0.21439943 0.18159059 prediction 0.676851337891884 Functional Gain - TRIM6;TRIM6-TRIM34 ENSG00000121236;ENSG00000258588 CDS Human other chr11:5631383 chr11:5631384 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_24579 0 0 1 0 2 unknown 0.438718589014394 0.438718592638094 0 0 hPsi_site_18303 iPseU_CNN:0;iRNA_PseU:0 18304 chr19 16799040 16799040 1 + G A UCEC 16799039 + 16799019 16799059 41 CCGTGCTGTTTGGTTCGGCCTGCGGGGGTGACCATCACCAC CCGTGCTGTTTGGTTCGGCCTACGGGGGTGACCATCACCAC < 41bp 0.433292788061459 0.838422801906198 0.28403914 0.70086163 prediction 0.676845603812396 Functional Gain - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16799039 chr19:16799040 nonsynonymous SNV 0.068 0 22 hPsi_associated_SNPs_24580 0 0 0 0 1 Ribosome 0.438720641481675 0.438720587572777 0.40172326 0 hPsi_site_18304 iPseU_CNN:0.40172326;iRNA_PseU:0 18305 chr12 53491531 53491531 1 + G A rs17123156 53491530 + 53491510 53491550 41 CCACAGGCTGCTGCCACCGCTGCTGCTGCTGCTAGCTCTGC CCACAGGCTGCTGCCACCGCTACTGCTGCTGCTAGCTCTGC < 41bp 0.464215655811889 0.838421742852278 0.4222971 0.6669909 prediction 0.676843485704556 Functional Gain - IGFBP6 ENSG00000167779 CDS Human protein_coding chr12:53491530 chr12:53491531 synonymous SNV . 0 22 hPsi_associated_SNPs_24581 0 0 0 0 0 nucleus 0.438718033532983 0.438674423611173 0.3339818 0 hPsi_site_18305 iPseU_CNN:0.3339818;iRNA_PseU:0 18306 chr4 25664150 25664150 1 + G A COAD 25664149 + 25664129 25664169 41 CCCTGGCCTGAATTGGGAGATGCCCAGCCCAACCCCGATAA CCCTGGCCTGAATTGGGAGATACCCAGCCCAACCCCGATAA < 41bp 0.429955377439477 0.838418224080801 0.3376893 0.7931477 prediction 0.676836448161603 Functional Gain - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25664149 chr4:25664150 nonsynonymous SNV 0.966 0 22 hPsi_associated_SNPs_24582 0 0 0 0 2 nucleus 0.43871859137661 0.438717941262242 0.5862954 0 hPsi_site_18306 iPseU_CNN:0.5862954;iRNA_PseU:0 18307 chr9 71094380 71094380 1 + C A STAD 71094379 + 71094359 71094399 41 TGGCCTGTGGGCTGTCTTGGTCTGGCTCTCCATTATTGCTG TGGCCTGTGGGCTGTCTTGGTATGGCTCTCCATTATTGCTG < 41bp 0.521153531588014 0.859569305825525 0.3270682 0.63871354 prediction 0.676831548475023 Functional Gain - PGM5 ENSG00000154330 CDS Human protein_coding chr9:71094379 chr9:71094380 synonymous SNV . 0 22 hPsi_associated_SNPs_24583 0 0 1 0 2 exosome 0.438714018978478 0.438718630825169 0.27742708 0 hPsi_site_18307 iPseU_CNN:0.27742708;iRNA_PseU:0 18308 chr16 22926558 22926558 1 + G A BLCA 22926557 + 22926537 22926577 41 ACGTGCTGCACCTGGAGAGCTGGCTGCAGTACTTCCCGCTA ACGTGCTGCACCTGGAGAGCTAGCTGCAGTACTTCCCGCTA < 41bp 0.556772282628889 0.895180420499413 0.15209427 0.42526785 prediction 0.676816275741048 Functional Gain - HS3ST2 ENSG00000122254 CDS Human protein_coding chr16:22926557 chr16:22926558 stopgain 1.000 1 22 hPsi_associated_SNPs_24584 0 0 0 0 0 exosome 0.439054755371484 0.438719267581817 0 0 hPsi_site_18308 iPseU_CNN:0;iRNA_PseU:0 18309 chr10 51769497 51769497 1 + G A BLCA 51769496 + 51769476 51769516 41 GTTATGTCATCTATTGTCAATGACCTAGCCAACAGCATCTG GTTATGTCATCTATTGTCAATAACCTAGCCAACAGCATCTG < 41bp 0.553595223077002 0.892001166555181 0.30142465 0.491322 prediction 0.676811886956358 Functional Gain - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51769496 chr10:51769497 nonsynonymous SNV 0.153 1 22 hPsi_associated_SNPs_24585 0 0 0 0 0 chromatin 0.438719519589758 0.438610535983185 0 0 hPsi_site_18309 iPseU_CNN:0;iRNA_PseU:0 18310 chr7 127235623 127235623 1 + G A SKCM 127235622 + 127235602 127235642 41 TCCTCTCAGCTTACCACATGTGGACCCCCCGACCAGCCCTC TCCTCTCAGCTTACCACATGTAGACCCCCCGACCAGCCCTC < 41bp 0.415832440634757 0.838403916591791 0.4156084 0.68079233 prediction 0.676807833183581 Functional Gain - FSCN3 ENSG00000106328 CDS Human protein_coding chr7:127235622 chr7:127235623 stopgain 0.999 1 22 hPsi_associated_SNPs_24586 0 0 0 0 0 exosome 0.438721643071091 0.438704937831508 0.36158466 0 hPsi_site_18310 iPseU_CNN:0.36158466;iRNA_PseU:0 18311 chr20 25429090 25429090 1 + G A rs116696590 25429089 + 25429069 25429109 41 AATAGAAATACAATTGATGTTGAACTTGTATCCTTCAGCCT AATAGAAATACAATTGATGTTAAACTTGTATCCTTCAGCCT < 41bp 0.489940805730863 0.838403477578273 0.19315365 0.2932899 prediction 0.676806955156547 Functional Gain - GINS1 ENSG00000101003 UTR3 Human protein_coding chr20:25429089 chr20:25429090 . . 0 22 hPsi_associated_SNPs_24587 0 0 1 2 0 Ribosome 0.438718590301621 0.438718599041189 0 0 hPsi_site_18311 iPseU_CNN:0;iRNA_PseU:0 18312 chr1 112308795 112308795 1 + C A SKCM 112308794 + 112308774 112308814 41 TTGTCTGTCTTCCTTTAAAATCCATCAGCCATACACGTTGA TTGTCTGTCTTCCTTTAAAATACATCAGCCATACACGTTGA < 41bp 0.503459582281873 0.841857936806685 0.22034967 0.45939657 prediction 0.676796709049625 Functional Gain - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112308794 chr1:112308795 synonymous SNV . 0 22 hPsi_associated_SNPs_24588 0 0 1 0 0 Ribosome 0.438728808749578 0.438847341897903 0 0 hPsi_site_18312 iPseU_CNN:0;iRNA_PseU:0 18313 chr6 16145422 16145422 1 + G A LUAD 16145421 + 16145401 16145441 41 CTGCCAGCAGACCCGGGTGCTGCAGGAGAAGCTACGCAAGC CTGCCAGCAGACCCGGGTGCTACAGGAGAAGCTACGCAAGC < 41bp 0.428971142260753 0.838391048509357 0.2571805 0.40409935 prediction 0.676782097018714 Functional Gain - MYLIP ENSG00000007944 CDS Human protein_coding chr6:16145421 chr6:16145422 synonymous SNV . 0 22 hPsi_associated_SNPs_24589 0 0 1 0 0 Cytosol 0.435766983777387 0.438442778841779 0 0 hPsi_site_18313 iPseU_CNN:0;iRNA_PseU:0 18314 chr8 11615948 11615948 1 + C A COAD 11615947 + 11615927 11615967 41 GGACTCTTGGAACAGCCTGGTCTTGGCCGACAGTCACGGGG GGACTCTTGGAACAGCCTGGTATTGGCCGACAGTCACGGGG < 41bp 0.494443756923424 0.838385577445306 0.42607054 0.80690217 prediction 0.676771154890612 Functional Gain - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11615947 chr8:11615948 synonymous SNV . 0 22 hPsi_associated_SNPs_24590 0 0 1 0 0 cytosol 0.438718597290542 0.438720730260433 0.61380434 0 hPsi_site_18314 iPseU_CNN:0.61380434;iRNA_PseU:0 18315 chr4 105412175 105412175 1 + G A LUAD 105412174 + 105412154 105412194 41 TCTGTGACGGCTGCTGAGGCTGCTGCGGGGGAGTGAAGGGC TCTGTGACGGCTGCTGAGGCTACTGCGGGGGAGTGAAGGGC < 41bp 0.521165417362124 0.859550961501986 0.2022022 0.3058514 prediction 0.676771088279724 Functional Gain - CXXC4 ENSG00000168772 CDS Human protein_coding chr4:105412174 chr4:105412175 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24591 0 0 0 0 1 Ribosome 0.43872010879143 0.438787991752377 0 0 hPsi_site_18315 iPseU_CNN:0;iRNA_PseU:0 18316 chr14 88892904 88892904 1 + C A GBM 88892903 + 88892883 88892923 41 ATAAACATTCTGAACTCTTTTCTAACAAACAATTGCCATTC ATAAACATTCTGAACTCTTTTATAACAAACAATTGCCATTC < 41bp 0.515106355332802 0.85349033261053 0.51897854 0.44064242 prediction 0.676767954555457 Functional Gain - SPATA7 ENSG00000042317 CDS Human protein_coding chr14:88892903 chr14:88892904 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_24592 0 0 1 0 0 Nucleus 0.439060892178521 0.438718220577799 0 0 hPsi_site_18316 iPseU_CNN:0;iRNA_PseU:0 18317 chr11 94231294 94231294 1 + G A COAD 94231293 + 94231273 94231313 41 ACTCACGTGAACACTAGGGATGAAGATGAGTATACCCCTCT ACTCACGTGAACACTAGGGATAAAGATGAGTATACCCCTCT < 41bp 0.468136537447252 0.838377801567255 0.3012995 0.50631714 prediction 0.67675560313451 Functional Gain - ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94231293 chr11:94231294 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24593 0 0 1 0 1 exosome 0.43871483701918 0.438397751400646 0.0126342800000001 0 hPsi_site_18317 iPseU_CNN:0.0126342800000001;iRNA_PseU:0 18318 chr12 69145849 69145849 1 + C A UCEC 69145848 + 69145828 69145868 41 AGCATGAATTACAAGTGAACTCAATGCAGCTGCTGTACTAC AGCATGAATTACAAGTGAACTAAATGCAGCTGCTGTACTAC < 41bp 0.49092826837827 0.838372212146227 0.25695178 0.44561273 prediction 0.676744424292454 Functional Gain - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69145848 chr12:69145849 stopgain 0.943 1 22 hPsi_associated_SNPs_24594 0 0 1 0 1 nucleolus 0.438689825919985 0.438686617938635 0 0 hPsi_site_18318 iPseU_CNN:0;iRNA_PseU:0 18319 chr15 90728214 90728214 1 + G A rs556639423 90728213 + 90728193 90728233 41 GACTCCGGGTCCCCAGGGGCTGCGCCGGGCCGGCCTGGCAA GACTCCGGGTCCCCAGGGGCTACGCCGGGCCGGCCTGGCAA < 41bp 0.483095182849767 0.838366115063097 0.28336793 0.4520154 prediction 0.676732230126194 Functional Gain - SEMA4B ENSG00000185033 UTR5 Human protein_coding chr15:90728213 chr15:90728214 . . 0 22 hPsi_associated_SNPs_24595 0 0 1 0 1 chromatin 0.438718592986821 0.43871859299511 0 0 hPsi_site_18319 iPseU_CNN:0;iRNA_PseU:0 18320 chr19 50169096 50169096 1 + G A SKCM 50169095 + 50169075 50169115 41 AAGCCGATGGGACGGCCCGCTGGGCTGTTCCCGCCCCTATG AAGCCGATGGGACGGCCCGCTAGGCTGTTCCCGCCCCTATG < 41bp 0.45800254141622 0.838365548328632 0.21913311 0.33740294 prediction 0.676731096657264 Functional Gain - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50169095 chr19:50169096 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_24596 0 0 0 0 0 Ribosome 0.438718592994464 0.438718593006648 0 0 hPsi_site_18320 iPseU_CNN:0;iRNA_PseU:0 18321 chr3 196387318 196387318 1 + G A COAD 196387317 + 196387297 196387337 41 GCTGCTGTTCTTCCCGCTGCTGCCCCAGTACAGCAAGTTGC GCTGCTGTTCTTCCCGCTGCTACCCCAGTACAGCAAGTTGC < 41bp 0.427074870484189 0.838365398567645 0.12663537 0.19162184 prediction 0.676730797135289 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196387317 chr3:196387318 synonymous SNV . 0 22 hPsi_associated_SNPs_24597 0 0 0 0 0 chromatin 0.438779459889135 0.438993225909757 0 0 hPsi_site_18321 iPseU_CNN:0;iRNA_PseU:0 18322 chr8 26481760 26481760 1 + G A COAD 26481759 + 26481739 26481779 41 TGCTGTGACTACTCTCTGCATGTGGACATCAGTGAGTGGCA TGCTGTGACTACTCTCTGCATATGGACATCAGTGAGTGGCA < 41bp 0.428650268207215 0.838352782532545 0.34849522 0.4878016 prediction 0.676705565065089 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26481759 chr8:26481760 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_24598 0 0 1 0 1 Nucleus 0.43113772047676 0.44022377906506 0 0 hPsi_site_18322 iPseU_CNN:0;iRNA_PseU:0 18323 chr22 41613134 41613134 1 + C A UCEC 41613133 + 41613113 41613153 41 TCTCTGCTCTGCAGCTCTGGTCTTGGGCTTCGACTGGGGGA TCTCTGCTCTGCAGCTCTGGTATTGGGCTTCGACTGGGGGA < 41bp 0.486951421219237 0.838351836508356 0.3105209 0.6439352 prediction 0.676703673016712 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41613133 chr22:41613134 synonymous SNV . 0 22 hPsi_associated_SNPs_24599 0 0 1 0 2 Ribosome 0.438719019285029 0.438718584710894 0.2878704 0 hPsi_site_18323 iPseU_CNN:0.2878704;iRNA_PseU:0 18324 chr3 15282052 15282052 1 + G A LUAD 15282051 + 15282031 15282071 41 GGAAGATACAGTGAAAATGATGTAAAAAACTGGACTCCAGA GGAAGATACAGTGAAAATGATATAAAAAACTGGACTCCAGA < 41bp 0.458774284021605 0.838344887782321 0.37063426 0.3518403 prediction 0.676689775564641 Functional Gain - CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15282051 chr3:15282052 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24600 0 0 1 0 2 Cytosol 0.438718436271264 0.43871856352715 0 0 hPsi_site_18324 iPseU_CNN:0;iRNA_PseU:0 18325 chr19 55144176 55144176 1 + C A BLCA 55144175 + 55144155 55144195 41 ACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTG ACAACCTCTCCTCCGAGTGGTAGGCCCCCAGCGACCCCCTG < 41bp 0.48019247802005 0.838339552433422 0.1757311 0.2709003 prediction 0.676679104866844 Functional Gain - LILRB1 ENSG00000104972 CDS Human protein_coding chr19:55144175 chr19:55144176 stopgain 0.589 0 22 hPsi_associated_SNPs_24601 0 0 0 0 1 exosome 0.438533255902354 0.438695272842551 0 0 hPsi_site_18325 iPseU_CNN:0;iRNA_PseU:0 18326 chr10 124672371 124672371 1 + G A SKCM 124672370 + 124672350 124672390 41 CCAGGCCAAAGCCACCACCATGGAGTCTTGTCCATCTCTCC CCAGGCCAAAGCCACCACCATAGAGTCTTGTCCATCTCTCC < 41bp 0.445493751813208 0.838335309356511 0.23750183 0.3533535 prediction 0.676670618713023 Functional Gain - FAM24A ENSG00000203795 CDS Human protein_coding chr10:124672370 chr10:124672371 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24602 0 0 0 0 1 unknown 0.438718572010335 0.438718586118153 0 0 hPsi_site_18326 iPseU_CNN:0;iRNA_PseU:0 18327 chr19 15769147 15769147 1 + G A COAD 15769146 + 15769126 15769166 41 AGGCTGCATCCCCCAGTCCCTGCCGTCTCTCGCTGCTGCAC AGGCTGCATCCCCCAGTCCCTACCGTCTCTCGCTGCTGCAC < 41bp 0.564448932288424 0.902784030052359 0.28822646 0.4138612 prediction 0.676670195527872 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15769146 chr19:15769147 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24603 0 0 1 0 2 exosome 0.438667177526332 0.434099778384297 0 0 hPsi_site_18327 iPseU_CNN:0;iRNA_PseU:0 18328 chr11 94861921 94861921 1 + C A UCEC 94861920 + 94861900 94861940 41 GCTGGCAGCCTGTTGTGCTGTCCCTGGAGGAGGCTGGGCCA GCTGGCAGCCTGTTGTGCTGTACCTGGAGGAGGCTGGGCCA < 41bp 0.479138332266419 0.83833480175559 0.20699233 0.56934124 prediction 0.67666960351118 Functional Gain - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94861920 chr11:94861921 synonymous SNV . 0 22 hPsi_associated_SNPs_24604 0 0 0 0 0 Ribosome 0.438718592983011 0.438712593409211 0.13868248 0 hPsi_site_18328 iPseU_CNN:0.13868248;iRNA_PseU:0 18329 chr1 12819417 12819417 1 + C A LUSC 12819416 + 12819396 12819436 41 GAGAAGTCTGACTTTCCCCTTCTTGGTACCTTTATAATTCA GAGAAGTCTGACTTTCCCCTTATTGGTACCTTTATAATTCA < 41bp 0.487342788702414 0.838333375708009 0.28607658 0.3048916 prediction 0.676666751416018 Functional Gain - C1orf158 ENSG00000157330 CDS Human protein_coding chr1:12819416 chr1:12819417 nonsynonymous SNV 0.673 0 22 hPsi_associated_SNPs_24605 0 0 0 0 1 Cytosol 0.438161468882708 0.447950525307682 0 0 hPsi_site_18329 iPseU_CNN:0;iRNA_PseU:0 18330 chr12 121416883 121416883 1 + G A HNSC 121416882 + 121416862 121416902 41 GGCCCACCAGAAAGCCGTGGTGGAGACCCTTCTGCAGTAAG GGCCCACCAGAAAGCCGTGGTAGAGACCCTTCTGCAGTAAG < 41bp 0.537260721613281 0.875593964356105 0.31173816 0.4394148 prediction 0.676666485485648 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121416882 chr12:121416883 synonymous SNV . 0 22 hPsi_associated_SNPs_24606 0 0 1 0 1 cytosol 0.438718592995102 0.438718592973541 0 0 hPsi_site_18330 iPseU_CNN:0;iRNA_PseU:0 18331 chr16 57059987 57059987 1 + C A BLCA 57059986 + 57059966 57060006 41 CGGGTGGAAGAATATGTGAATCACTTCTTCAGCGCCCAGCC CGGGTGGAAGAATATGTGAATAACTTCTTCAGCGCCCAGCC < 41bp 0.501187485211401 0.839517314795575 0.6010657 0.71245164 prediction 0.676659659168349 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57059986 chr16:57059987 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_24607 0 0 0 0 0 Ribosome 0.438718575758957 0.438818561371994 0.22277188 0 hPsi_site_18331 iPseU_CNN:0.22277188;iRNA_PseU:0 18332 chr2 118864358 118864358 1 + G A OV 118864357 + 118864337 118864377 41 CAGTTGTCTCTCACACTGGCTGCACTATCCATTGGACTGTG CAGTTGTCTCTCACACTGGCTACACTATCCATTGGACTGTG < 41bp 0.440874715780005 0.838321401856653 0.25442278 0.35040638 prediction 0.676642803713305 Functional Gain - INSIG2 ENSG00000125629 CDS Human protein_coding chr2:118864357 chr2:118864358 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24608 0 0 1 0 1 Ribosome 0.428690008927208 0.438953909741958 0 0 hPsi_site_18332 iPseU_CNN:0;iRNA_PseU:0 18333 chr6 29556487 29556487 1 + G A rs147023039 29556486 + 29556466 29556506 41 TTCTACAGCTCAGTCATTGCTGTCTACCTCCAGCCCAAAAA TTCTACAGCTCAGTCATTGCTATCTACCTCCAGCCCAAAAA < 41bp 0.466751293878208 0.838314913667584 0.2997647 0.58312297 prediction 0.676629827335169 Functional Gain - OR2H2 ENSG00000204657 CDS Human protein_coding chr6:29556486 chr6:29556487 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_24609 0 0 0 0 0 unknown 0.438707246963429 0.43871838282549 0.16624594 0 hPsi_site_18333 iPseU_CNN:0.16624594;iRNA_PseU:0 18334 chr3 47277592 47277592 1 + G A STAD 47277591 + 47277571 47277611 41 CGCCTGGCTTCAGTGCCATCTGCATGTCCTCAGGGATGACA CGCCTGGCTTCAGTGCCATCTACATGTCCTCAGGGATGACA < 41bp 0.436814708596529 0.838313969724369 0.19190207 0.24792814 prediction 0.676627939448738 Functional Gain - KIF9 ENSG00000088727 CDS Human protein_coding chr3:47277591 chr3:47277592 stopgain 0.221 1 22 hPsi_associated_SNPs_24610 0 0 0 2 2 Ribosome 0.438853193477612 0.439288538458116 0 0 hPsi_site_18334 iPseU_CNN:0;iRNA_PseU:0 18335 chr4 79503418 79503418 1 + G A SARC 79503417 + 79503397 79503437 41 ACTCCACCAGCAGTCTTTGATGCAAAGCAGCTAAAGAAATC ACTCCACCAGCAGTCTTTGATACAAAGCAGCTAAAGAAATC < 41bp 0.432801785270698 0.838311222859834 0.20790967 0.31708083 prediction 0.676622445719668 Functional Gain - ANXA3 ENSG00000138772 CDS Human protein_coding chr4:79503417 chr4:79503418 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24611 0 0 0 0 2 cytosol 0.437936306442202 0.44239504590812 0 0 hPsi_site_18335 iPseU_CNN:0;iRNA_PseU:0 18336 chr6 79607661 79607661 1 + C A UCEC 79607660 + 79607640 79607680 41 AGTTCTATCATACTCCAGGTTCTGTTGAGAATCTTCGGTAA AGTTCTATCATACTCCAGGTTATGTTGAGAATCTTCGGTAA < 41bp 0.496231330278217 0.838308990707359 0.24059075 0.5266248 prediction 0.676617981414718 Functional Gain - IRAK1BP1 ENSG00000146243 CDS Human protein_coding chr6:79607660 chr6:79607661 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24612 0 0 1 3 1 cytosol 0.438717163160353 0.438709041435823 0.0532496 0 hPsi_site_18336 iPseU_CNN:0.0532496;iRNA_PseU:0 18337 chr20 47895492 47895492 1 + G A BLCA 47895491 + 47895471 47895511 41 CCCTTGGCTGGTGTAAATGATGACTTCACTTTTTTCCCCAT CCCTTGGCTGGTGTAAATGATAACTTCACTTTTTTCCCCAT < 41bp 0.499501418277936 0.838304599779261 0.33226526 0.49019703 prediction 0.676609199558523 Functional Gain - SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895491 chr20:47895492 . . 0 22 hPsi_associated_SNPs_24613 0 0 1 1 0 unknown 0.438717601253811 0.43871843973267 0 0 hPsi_site_18337 iPseU_CNN:0;iRNA_PseU:0 18338 chr20 61444883 61444883 1 + C A rs146574437 61444882 + 61444862 61444902 41 ACGAGCCAGCCGAGAGCCCATCGGAGACCCCAGGCCCCAGC ACGAGCCAGCCGAGAGCCCATAGGAGACCCCAGGCCCCAGC < 41bp 0.502457273926876 0.840756664746121 0.3563385 0.39094728 prediction 0.67659878163849 Functional Gain - OGFR ENSG00000060491 CDS Human protein_coding chr20:61444882 chr20:61444883 stopgain 0.000 0 22 hPsi_associated_SNPs_24614 0 0 0 0 0 Ribosome 0.438716643081195 0.438718594470392 0 0 hPsi_site_18338 iPseU_CNN:0;iRNA_PseU:0 18339 chr6 44219858 44219858 1 + G A BLCA 44219857 + 44219837 44219877 41 GTGCAGCAGCTCAAGGAATTTGATGGGAAGAGCCTGGTCTC GTGCAGCAGCTCAAGGAATTTAATGGGAAGAGCCTGGTCTC < 41bp 0.423158812572155 0.838297461139549 0.30331832 0.5627118 prediction 0.676594922279097 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219857 chr6:44219858 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24615 0 0 1 0 0 Nucleus 0.438718592995068 0.438718592303001 0.1254236 0 hPsi_site_18339 iPseU_CNN:0.1254236;iRNA_PseU:0 18340 chr5 159640768 159640768 1 + G A COAD 159640767 + 159640747 159640787 41 TGAGAGCTGTGTTGTCTGCGTGCACATGGGTGAGCCGGAAA TGAGAGCTGTGTTGTCTGCGTACACATGGGTGAGCCGGAAA < 41bp 0.447630988230183 0.838295724642331 0.22455728 0.68388706 prediction 0.676591449284662 Functional Gain - FABP6 ENSG00000170231 CDS Human protein_coding chr5:159640767 chr5:159640768 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_24616 0 0 0 0 2 Ribosome 0.438261530542219 0.439320719613311 0.36777412 0 hPsi_site_18340 iPseU_CNN:0.36777412;iRNA_PseU:0 18341 chr10 118969466 118969466 1 + G A SKCM 118969465 + 118969445 118969485 41 TCCATCATCAGCAACCTGGATGAAGTTGGACAGCAGGTGGA TCCATCATCAGCAACCTGGATAAAGTTGGACAGCAGGTGGA < 41bp 0.440105182238182 0.8382931738733 0.36493692 0.7725626 prediction 0.676586347746599 Functional Gain - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118969465 chr10:118969466 nonsynonymous SNV 0.933 1 22 hPsi_associated_SNPs_24617 0 0 0 0 0 unknown 0.43873116022087 0.438718606865645 0.5451252 0 hPsi_site_18341 iPseU_CNN:0.5451252;iRNA_PseU:0 18342 chr11 1861883 1861883 1 + G A GBM 1861882 + 1861862 1861902 41 CCCGGGCTCCATGTCTGAAGTGCAGGTACCAGCCCCTCCCC CCCGGGCTCCATGTCTGAAGTACAGGTACCAGCCCCTCCCC < 41bp 0.547130667811477 0.885410302520713 0.21983907 0.56289786 prediction 0.676559269418472 Functional Gain - TNNI2 ENSG00000130598 CDS Human protein_coding chr11:1861882 chr11:1861883 synonymous SNV . 0 22 hPsi_associated_SNPs_24618 0 0 0 0 1 exosome 0.438718580206506 0.438718596604562 0.12579572 0 hPsi_site_18342 iPseU_CNN:0.12579572;iRNA_PseU:0 18343 chr9 115422242 115422242 1 + G A COAD 115422241 + 115422221 115422261 41 CTGCGCTCTCTTCGGGGAATTGTCCCAAACTTAGCCAAGAA CTGCGCTCTCTTCGGGGAATTATCCCAAACTTAGCCAAGAA < 41bp 0.439664623937315 0.838276155320269 0.31437683 0.4874403 prediction 0.676552310640538 Functional Gain - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115422241 chr9:115422242 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24619 0 0 0 0 0 Nucleus 0.438729598782074 0.438722935064628 0 0 hPsi_site_18343 iPseU_CNN:0;iRNA_PseU:0 18344 chr8 129162430 129162430 1 + G A SKCM 129162429 + 129162409 129162449 41 CCTCTGATGAGTCACCACTGTGGTGGGGGGGAGTGGACAGT CCTCTGATGAGTCACCACTGTAGTGGGGGGGAGTGGACAGT < 41bp 0.504568398875573 0.842844116342414 0.32255343 0.88559365 prediction 0.676551434933683 Functional Gain - MIR1208 ENSG00000221261 ncRNA_exonic Human miRNA chr8:129162429 chr8:129162430 . . 0 22 hPsi_associated_SNPs_24620 0 0 0 0 0 unknown 0.438731634280055 0.438560594505291 0.7711873 0 hPsi_site_18344 iPseU_CNN:0.7711873;iRNA_PseU:0 18345 chr19 50931497 50931497 1 + C A BRCA 50931496 + 50931476 50931516 41 CCAGAAGCTGGCGCGCGCCCTCCGAAACTACGCCAAGACCG CCAGAAGCTGGCGCGCGCCCTACGAAACTACGCCAAGACCG < 41bp 0.513856957025534 0.852131708838995 0.25573805 0.7002464 prediction 0.676549503626922 Functional Gain - SPIB ENSG00000142539;ENSG00000269404 CDS Human other chr19:50931496 chr19:50931497 synonymous SNV . 0 22 hPsi_associated_SNPs_24621 0 0 0 0 0 Endoplasmic reticulum 0.438718591860791 0.438722905287792 0.4004928 0 hPsi_site_18345 iPseU_CNN:0.4004928;iRNA_PseU:0 18346 chr2 122522720 122522720 1 + C A COAD 122522719 + 122522699 122522739 41 TCCTGGTACAGTCGAGGCTGTCTGTCAACAGCGTGACTGCT TCCTGGTACAGTCGAGGCTGTATGTCAACAGCGTGACTGCT < 41bp 0.477612903878144 0.838269564746454 0.17614222 0.54028934 prediction 0.676539129492907 Functional Gain - TSN ENSG00000211460 CDS Human protein_coding chr2:122522719 chr2:122522720 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_24622 0 0 1 1 1 Ribosome 0.438712399993348 0.435789304355891 0.0805786799999999 0 hPsi_site_18346 iPseU_CNN:0.0805786799999999;iRNA_PseU:0 18347 chr16 857568 857568 1 + C A LUSC 857567 + 857547 857587 41 GGCCTGGGCCCCTGTGGCCGTCCCGCCAGCGGCCGTCTTCT GGCCTGGGCCCCTGTGGCCGTACCGCCAGCGGCCGTCTTCT < 41bp 0.489135168513373 0.838267358656008 0.23434258 0.59839106 prediction 0.676534717312016 Functional Gain - PRR25 ENSG00000167945 CDS Human protein_coding chr16:857567 chr16:857568 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_24623 0 0 0 0 2 exosome 0.450793652292687 0.438833198365954 0.19678212 0 hPsi_site_18347 iPseU_CNN:0.19678212;iRNA_PseU:0 18348 chr1 154226498 154226498 1 + C A HNSC 154226497 + 154226477 154226517 41 GCCCTCTTTATGAACAGAGATCCACACAGACTCGGCGGTAC GCCCTCTTTATGAACAGAGATACACACAGACTCGGCGGTAC < 41bp 0.513433396456172 0.851697461493598 0.30829567 0.45932934 prediction 0.676528130074852 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154226497 chr1:154226498 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24624 0 0 1 0 1 Nucleus 0.438706832936015 0.438541284940713 0 0 hPsi_site_18348 iPseU_CNN:0;iRNA_PseU:0 18349 chr2 27892155 27892155 1 + G A BLCA 27892154 + 27892134 27892174 41 ACTGGAAAACAACTGGTGGCTGAGGCCATTCACTCAGGAAA ACTGGAAAACAACTGGTGGCTAAGGCCATTCACTCAGGAAA < 41bp 0.5542486609763 0.892509242036612 0.21240169 0.283082 prediction 0.676521162120625 Functional Gain - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27892154 chr2:27892155 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24625 0 0 1 0 2 nucleoplasm 0.438717581506654 0.438719425819597 0 0 hPsi_site_18349 iPseU_CNN:0;iRNA_PseU:0 18350 chr20 25271212 25271212 1 + G A BLCA 25271211 + 25271191 25271231 41 CCCAGTTGTGGGTGACAGGTTGAAAGTGATCTTCCTGGAGA CCCAGTTGTGGGTGACAGGTTAAAAGTGATCTTCCTGGAGA < 41bp 0.554814872208259 0.893071746294389 0.30794522 0.7037934 prediction 0.676513748172259 Functional Gain - PYGB ENSG00000100994 CDS Human protein_coding chr20:25271211 chr20:25271212 synonymous SNV . 0 22 hPsi_associated_SNPs_24626 0 0 0 0 2 Nucleus 0.438626425848553 0.438718539040344 0.4075868 0 hPsi_site_18350 iPseU_CNN:0.4075868;iRNA_PseU:0 18351 chr7 102389902 102389902 1 + G A UCEC 102389901 + 102389881 102389921 41 GGCTGCGGGCGCGGCTCCCGTGCCACCTGGCCGTGAGGCCC GGCTGCGGGCGCGGCTCCCGTACCACCTGGCCGTGAGGCCC < 41bp 0.518719634912221 0.856970792094465 0.32744128 0.6615733 prediction 0.676502314364487 Functional Gain - FAM185A ENSG00000222011 CDS Human protein_coding chr7:102389901 chr7:102389902 nonsynonymous SNV 0.934 2 22 hPsi_associated_SNPs_24627 0 0 0 0 0 chromatin 0.438718564103162 0.438718561176387 0.3231466 0 hPsi_site_18351 iPseU_CNN:0.3231466;iRNA_PseU:0 18352 chr9 98229471 98229471 1 + C A KIRP 98229470 + 98229450 98229490 41 TTCTTCCAACATGACATACTTCACGTTACTGAAACTCCTGT TTCTTCCAACATGACATACTTAACGTTACTGAAACTCCTGT < 41bp 0.49705642405787 0.838245745365253 0.12580612 0.13181356 prediction 0.676491490730506 Functional Gain - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98229470 chr9:98229471 synonymous SNV . 0 22 hPsi_associated_SNPs_24628 0 0 0 0 1 Endoplasmic reticulum 0.438855970279366 0.439390451644367 0 0 hPsi_site_18352 iPseU_CNN:0;iRNA_PseU:0 18353 chr22 29655155 29655155 1 + G A rs531576393 29655154 + 29655134 29655174 41 TGGGCCTCAGTTTCCCTCTGTGAAGTGGGGGGAGGCAGGCC TGGGCCTCAGTTTCCCTCTGTAAAGTGGGGGGAGGCAGGCC < 41bp 0.476320518571342 0.838245478786039 0.32303518 0.60185516 prediction 0.676490957572077 Functional Gain - EMID1 ENSG00000186998 UTR3 Human protein_coding chr22:29655154 chr22:29655155 . . 0 22 hPsi_associated_SNPs_24629 0 0 0 0 0 chromatin 0.43871856114513 0.43871860190188 0.20371032 0 hPsi_site_18353 iPseU_CNN:0.20371032;iRNA_PseU:0 18354 chr16 30776576 30776576 1 + G A UCEC 30776575 + 30776555 30776595 41 GGAGACAACAGTGGAGGACTTGCAGTGGGACATCGAGAAGC GGAGACAACAGTGGAGGACTTACAGTGGGACATCGAGAAGC < 41bp 0.558338818717474 0.896583376208342 0.27644485 0.34739655 prediction 0.676489114981736 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30776575 chr16:30776576 synonymous SNV . 0 22 hPsi_associated_SNPs_24630 0 0 1 0 2 Ribosome 0.43871864828801 0.438810770934134 0 0 hPsi_site_18354 iPseU_CNN:0;iRNA_PseU:0 18355 chr3 178916882 178916882 1 + G A GBM 178916881 + 178916861 178916901 41 TTGATGAAACAAGACGACTTTGTGACCTTCGGCTTTTTCAA TTGATGAAACAAGACGACTTTATGACCTTCGGCTTTTTCAA < 41bp 0.542516788401099 0.880756539756072 0.27999485 0.35178447 prediction 0.676479502709945 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178916881 chr3:178916882 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24631 0 0 1 0 1 Ribosome 0.438694494216003 0.438698555092567 0 0 hPsi_site_18355 iPseU_CNN:0;iRNA_PseU:0 18356 chr9 97203287 97203287 1 + C A UCEC 97203286 + 97203266 97203306 41 GGTGGTATTTTGCGATGATTTCTGTGTCTGGAGTCTTCTCG GGTGGTATTTTGCGATGATTTATGTGTCTGGAGTCTTCTCG < 41bp 0.50929550024873 0.847533375507067 0.29349953 0.575863 prediction 0.676475750516675 Functional Gain - MFSD14B ENSG00000148110 CDS Human protein_coding chr9:97203286 chr9:97203287 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24632 0 0 1 0 2 Ribosome 0.438718604661853 0.438760436038803 0.151726 0 hPsi_site_18356 iPseU_CNN:0.151726;iRNA_PseU:0 18357 chr22 38471068 38471068 1 + G A rs187753076 38471067 + 38471047 38471087 41 GAGGAGGAAGACACGGCAGCTGGGGAGCCGTCCAGGGATAC GAGGAGGAAGACACGGCAGCTAGGGAGCCGTCCAGGGATAC < 41bp 0.54814332071321 0.886378522186558 0.23884407 0.2789464 prediction 0.676470402946697 Functional Gain - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38471067 chr22:38471068 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_24633 0 0 1 0 0 Ribosome 0.438718591172936 0.438718592995124 0 0 hPsi_site_18357 iPseU_CNN:0;iRNA_PseU:0 18358 chr11 128781858 128781858 1 + G A SKCM 128781857 + 128781837 128781877 41 CCTCCGCAACTCCCACATCGTGGAGGCCTCCATCCGGGCCA CCTCCGCAACTCCCACATCGTAGAGGCCTCCATCCGGGCCA < 41bp 0.42880724980911 0.838231513897681 0.33880293 0.6734608 prediction 0.676463027795362 Functional Gain - KCNJ5 ENSG00000120457 CDS Human protein_coding chr11:128781857 chr11:128781858 synonymous SNV . 0 22 hPsi_associated_SNPs_24634 0 0 0 0 0 Ribosome 0.438718687348039 0.438718509043331 0.3469216 0 hPsi_site_18358 iPseU_CNN:0.3469216;iRNA_PseU:0 18359 chr13 42780232 42780232 1 + C A UCEC 42780231 + 42780211 42780251 41 GGCATAGCCGTGTTGAACATTCCCAGCTATGCTGGAGGCAC GGCATAGCCGTGTTGAACATTACCAGCTATGCTGGAGGCAC < 41bp 0.490484901334031 0.83822908022187 0.15851772 0.33495128 prediction 0.676458160443741 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42780231 chr13:42780232 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_24635 0 0 0 4 1 chromatin 0.43864178203027 0.438511825966289 0 0 hPsi_site_18359 iPseU_CNN:0;iRNA_PseU:0 18360 chr14 51058328 51058328 1 + G A LUAD 51058327 + 51058307 51058347 41 AGAGATTCAGCCACAGTATTTGCCCTTAGCACAATGATCAG AGAGATTCAGCCACAGTATTTACCCTTAGCACAATGATCAG < 41bp 0.432957012066518 0.838221720252996 0.2434046 0.31277344 prediction 0.676443440505992 Functional Gain - ATL1 ENSG00000198513 CDS Human protein_coding chr14:51058327 chr14:51058328 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24636 0 0 0 0 2 chromatin 0.435280600405626 0.438712417393051 0 0 hPsi_site_18360 iPseU_CNN:0;iRNA_PseU:0 18361 chr15 83793488 83793488 1 + G A UCEC 83793487 + 83793467 83793507 41 TTGATTTAATGTTGGTTGTGTGTCTCCTCCTGGCAACTGGA TTGATTTAATGTTGGTTGTGTATCTCCTCCTGGCAACTGGA < 41bp 0.550228215431071 0.888449275625479 0.3905227 0.43509656 prediction 0.676442120388816 Functional Gain - TM6SF1 ENSG00000136404 CDS Human protein_coding chr15:83793487 chr15:83793488 nonsynonymous SNV 0.712 0 22 hPsi_associated_SNPs_24637 0 0 1 0 2 chromatin 0.438721744837377 0.438722897458664 0 0 hPsi_site_18361 iPseU_CNN:0;iRNA_PseU:0 18362 chr11 34145364 34145364 1 + G A BLCA 34145363 + 34145343 34145383 41 GATAACCTCCATACTCTGTTTGAATTTGTATTTAAAGGATT GATAACCTCCATACTCTGTTTAAATTTGTATTTAAAGGATT < 41bp 0.442335911448821 0.838218537093607 0.21155605 0.2607112 prediction 0.676437074187215 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34145363 chr11:34145364 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_24638 0 0 1 0 2 chromatin 0.437120533384972 0.438718845853037 0 0 hPsi_site_18362 iPseU_CNN:0;iRNA_PseU:0 18363 chr4 9784814 9784814 1 + G A UCEC 9784813 + 9784793 9784833 41 CCGCACGCCGGTGGAGACGGTGAACATCAGCAATGAGCTCA CCGCACGCCGGTGGAGACGGTAAACATCAGCAATGAGCTCA < 41bp 0.443424963324487 0.838215726665962 0.3381696 0.7999604 prediction 0.676431453331924 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784813 chr4:9784814 synonymous SNV . 0 22 hPsi_associated_SNPs_24639 0 0 0 0 0 unknown 0.438719350848907 0.438710291772926 0.5999208 0 hPsi_site_18363 iPseU_CNN:0.5999208;iRNA_PseU:0 18364 chr12 53818605 53818605 1 + C A COAD 53818604 + 53818584 53818624 41 CTGCTCCTGTGGCACTGACTTCTGCAATGCCAATTACAGCC CTGCTCCTGTGGCACTGACTTATGCAATGCCAATTACAGCC < 41bp 0.511454532805959 0.849669511277348 0.20166185 0.27032626 prediction 0.676429956942779 Functional Gain - AMHR2 ENSG00000135409 CDS Human protein_coding chr12:53818604 chr12:53818605 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24640 0 0 0 0 1 exosome 0.438718594313883 0.438718589762288 0 0 hPsi_site_18364 iPseU_CNN:0;iRNA_PseU:0 18365 chr1 156206121 156206121 1 + G A rs1052067 156206120 + 156206100 156206140 41 GAAGGATCTGCACAGTGTTATGGCACCCTACTTCCTGCAGC GAAGGATCTGCACAGTGTTATAGCACCCTACTTCCTGCAGC < 41bp 0.556650100713541 0.894859252830914 0.16253826 0.21978626 prediction 0.676418304234746 Functional Gain - PMF1;PMF1-BGLAP ENSG00000160783;ENSG00000260238 CDS Human other chr1:156206120 chr1:156206121 nonsynonymous SNV 0.663 0 22 hPsi_associated_SNPs_24641 0 0 1 0 1 unknown 0.438731467665999 0.438719975570915 0 0 hPsi_site_18365 iPseU_CNN:0;iRNA_PseU:0 18366 chr1 207643049 207643049 1 + G A LGG 207643048 + 207643028 207643068 41 CAATTCCCCTAGAAATTTTTTGCCCATCACCTCCCCCTATT CAATTCCCCTAGAAATTTTTTACCCATCACCTCCCCCTATT < 41bp 0.430402320086029 0.838205998630231 0.22106683 0.31239045 prediction 0.676411997260462 Functional Gain - CR2 ENSG00000117322 CDS Human protein_coding chr1:207643048 chr1:207643049 nonsynonymous SNV 0.278 4 22 hPsi_associated_SNPs_24642 0 0 1 0 1 Endoplasmic reticulum 0.438718592957436 0.438718592993937 0 0 hPsi_site_18366 iPseU_CNN:0;iRNA_PseU:0 18367 chr16 14743788 14743788 1 + C A UCEC 14743787 + 14743767 14743807 41 AGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAAAGGTTT AGCAGCTGGGCCCTTGGGCATATCTTTACAGGGAAAGGTTT < 41bp 0.525393563232431 0.863599160241134 0.18266475 0.4432418 prediction 0.676411194017406 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14743787 chr16:14743788 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24643 0 0 1 0 1 Ribosome 0.438718605540927 0.438729964368188 0 0 hPsi_site_18367 iPseU_CNN:0;iRNA_PseU:0 18368 chr12 58018936 58018936 1 + G A LUAD 58018935 + 58018915 58018955 41 AAGCCAGATGGCCCAATGGTTGCAGGTGAGATGGGGTGACA AAGCCAGATGGCCCAATGGTTACAGGTGAGATGGGGTGACA < 41bp 0.445121682625661 0.838201674395421 0.21102974 0.8264251 prediction 0.676403348790843 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58018935 chr12:58018936 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_24644 0 0 0 0 2 chromatin 0.437459385832701 0.433769119643462 0.6528502 0 hPsi_site_18368 iPseU_CNN:0.6528502;iRNA_PseU:0 18369 chr22 19951785 19951785 1 + G A SKCM 19951784 + 19951764 19951804 41 ACATGGTCTTCCTCGACCACTGGAAGGACCGGTACCTGCCG ACATGGTCTTCCTCGACCACTAGAAGGACCGGTACCTGCCG < 41bp 0.434982005525537 0.838198461609027 0.757205 0.8579547 prediction 0.676396923218055 Functional Gain - COMT ENSG00000093010 CDS Human protein_coding chr22:19951784 chr22:19951785 stopgain 1.000 1 22 hPsi_associated_SNPs_24645 0 0 1 0 2 Ribosome 0.438717738545383 0.438728447722408 0.2014994 0 hPsi_site_18369 iPseU_CNN:0.2014994;iRNA_PseU:0 18370 chr12 113495677 113495677 1 + G A rs113426042 113495676 + 113495656 113495696 41 GGACCTCGAACAGGGGCGGCTGCCTCACTCCCTACCTGAGC GGACCTCGAACAGGGGCGGCTACCTCACTCCCTACCTGAGC < 41bp 0.527877255231742 0.866074457588612 0.28544873 0.77198625 prediction 0.676394404713741 Functional Gain - DTX1 ENSG00000135144 UTR5 Human protein_coding chr12:113495676 chr12:113495677 . . 0 22 hPsi_associated_SNPs_24646 0 0 0 0 0 Endoplasmic reticulum 0.43871837141707 0.438732837312051 0.5439725 0 hPsi_site_18370 iPseU_CNN:0.5439725;iRNA_PseU:0 18371 chr17 7462455 7462455 1 + G A BLCA 7462454 + 7462434 7462474 41 ACTCTCAGTTGCCCTCTGGTTGAGTTGGGGGGCAGCTCTGG ACTCTCAGTTGCCCTCTGGTTAAGTTGGGGGGCAGCTCTGG < 41bp 0.44981006825253 0.838196128932838 0.5030278 0.785885 prediction 0.676392257865676 Functional Gain - TNFSF13 ENSG00000161955 CDS Human protein_coding chr17:7462454 chr17:7462455 synonymous SNV . 0 22 hPsi_associated_SNPs_24647 0 0 0 0 1 Endoplasmic reticulum 0.438718593412726 0.438719054523609 0.5657144 0 hPsi_site_18371 iPseU_CNN:0.5657144;iRNA_PseU:0 18372 chr16 68308818 68308818 1 + C A UCEC 68308817 + 68308797 68308837 41 CAACATGATCGGCTCAGGGATCTTTGTCTCACCCAAGGGTG CAACATGATCGGCTCAGGGATATTTGTCTCACCCAAGGGTG < 41bp 0.516269623570985 0.854465196715254 0.3720077 0.62882245 prediction 0.676391146288538 Functional Gain - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68308817 chr16:68308818 synonymous SNV . 0 22 hPsi_associated_SNPs_24648 0 0 1 0 0 Ribosome 0.438724541910972 0.438109542176319 0.2576449 0 hPsi_site_18372 iPseU_CNN:0.2576449;iRNA_PseU:0 18373 chr11 112085592 112085592 1 + C A UCEC 112085591 + 112085571 112085611 41 CAGTGGCAAAAAGTATCATTTCTTTTATGGCTGTGGCTTTC CAGTGGCAAAAAGTATCATTTATTTTATGGCTGTGGCTTTC < 41bp 0.514009124637512 0.852202536003651 0.29675698 0.48219523 prediction 0.676386822732278 Functional Gain - BCO2 ENSG00000197580 CDS Human protein_coding chr11:112085591 chr11:112085592 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_24649 0 0 0 0 2 nucleus 0.447622852525373 0.438892259294848 0 0 hPsi_site_18373 iPseU_CNN:0;iRNA_PseU:0 18374 chr14 95057196 95057196 1 + C A LUAD 95057195 + 95057175 95057215 41 TCACCTCCCATGCTGATCTGTCCGGCATCAGCAACCACTCA TCACCTCCCATGCTGATCTGTACGGCATCAGCAACCACTCA < 41bp 0.475581070076626 0.838192142975638 0.31443274 0.85549223 prediction 0.676384285951276 Functional Gain - SERPINA5 ENSG00000188488 CDS Human protein_coding chr14:95057195 chr14:95057196 nonsynonymous SNV 0.049 4 22 hPsi_associated_SNPs_24650 0 0 1 0 1 cytosol 0.438853993374681 0.439014625230137 0.71098446 0 hPsi_site_18374 iPseU_CNN:0.71098446;iRNA_PseU:0 18375 chr2 201680198 201680198 1 + G A OV 201680197 + 201680177 201680217 41 AAACTTGATTACCGTCGATATGCAGAAACACTCTTTGACAT AAACTTGATTACCGTCGATATACAGAAACACTCTTTGACAT < 41bp 0.443565793874513 0.838182725994354 0.45327452 0.7450313 prediction 0.676365451988707 Functional Gain - BZW1 ENSG00000082153 CDS Human protein_coding chr2:201680197 chr2:201680198 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24651 0 0 1 4 0 Ribosome 0.438508036224597 0.438732206040568 0.4900626 0 hPsi_site_18375 iPseU_CNN:0.4900626;iRNA_PseU:0 18376 chr17 71166007 71166007 1 + C A STAD 71166006 + 71165986 71166026 41 CATCATGATATATGCTGGGCTCCGGAGCAACCAGTGGGGGA CATCATGATATATGCTGGGCTACGGAGCAACCAGTGGGGGA < 41bp 0.513331329332761 0.851511107653926 0.16582075 0.32790664 prediction 0.67635955664233 Functional Gain - SSTR2 ENSG00000180616 CDS Human protein_coding chr17:71166006 chr17:71166007 synonymous SNV . 0 22 hPsi_associated_SNPs_24652 0 0 0 0 0 nucleolus 0.438658064185606 0.438718032750023 0 0 hPsi_site_18376 iPseU_CNN:0;iRNA_PseU:0 18377 chr22 39883702 39883702 1 + G A UCEC 39883701 + 39883681 39883721 41 GCACCAAGGCCGGCGGCGTCTGCTTCAAACCCGGCACCAAG GCACCAAGGCCGGCGGCGTCTACTTCAAACCCGGCACCAAG < 41bp 0.437482519174557 0.838179511274746 0.18387422 0.28499693 prediction 0.676359022549493 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883701 chr22:39883702 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_24653 0 0 0 0 0 Endoplasmic reticulum 0.438772153432808 0.438748057525503 0 0 hPsi_site_18377 iPseU_CNN:0;iRNA_PseU:0 18378 chr16 4626173 4626173 1 + G A rs74005364 4626172 + 4626152 4626192 41 CCAGTCTGCCCTTCACCGGCTGAAAACCACCGCTGCCATCG CCAGTCTGCCCTTCACCGGCTAAAAACCACCGCTGCCATCG < 41bp 0.433679201852521 0.838155471130766 0.66072553 0.86819696 prediction 0.676310942261531 Functional Gain - C16orf96 ENSG00000205832 CDS Human protein_coding chr16:4626172 chr16:4626173 synonymous SNV . 0 22 hPsi_associated_SNPs_24654 0 0 0 0 0 exosome 0.438718593067456 0.438725832019647 0.41494286 0 hPsi_site_18378 iPseU_CNN:0.41494286;iRNA_PseU:0 18379 chr1 65243511 65243511 1 + C A UCEC 65243510 + 65243490 65243530 41 TATTGAGAGATGTTTTCTGGTCTATAGTGAAGTTACTGGCC TATTGAGAGATGTTTTCTGGTATATAGTGAAGTTACTGGCC < 41bp 0.487985763847987 0.838152824658639 0.1634275 0.24590465 prediction 0.676305649317278 Functional Gain - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65243510 chr1:65243511 synonymous SNV . 0 22 hPsi_associated_SNPs_24655 0 0 1 0 0 Ribosome 0.438718593004189 0.438718722613055 0 0 hPsi_site_18379 iPseU_CNN:0;iRNA_PseU:0 18380 chr1 202097045 202097045 1 + G A COAD 202097044 + 202097024 202097064 41 GGCTGTGCCTGAGCTCCTGCTGTGGCAGCTGGCACAGGAGC GGCTGTGCCTGAGCTCCTGCTATGGCAGCTGGCACAGGAGC < 41bp 0.553886874591052 0.892024741150932 0.2646938 0.2973345 prediction 0.67627573311976 Functional Gain - GPR37L1 ENSG00000170075 CDS Human protein_coding chr1:202097044 chr1:202097045 synonymous SNV . 0 22 hPsi_associated_SNPs_24656 0 0 0 0 0 Nucleus 0.438639595329253 0.439131472424678 0 0 hPsi_site_18380 iPseU_CNN:0;iRNA_PseU:0 18381 chr8 24775752 24775752 1 + C A LUSC 24775751 + 24775731 24775771 41 GTGATAAAGGTGCCAAGGGATCCAGGAAGGAAGACATAGCT GTGATAAAGGTGCCAAGGGATACAGGAAGGAAGACATAGCT < 41bp 0.509925349614792 0.848058262285329 0.22470874 0.64635444 prediction 0.676265825341074 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24775751 chr8:24775752 nonsynonymous SNV 0.665 2 22 hPsi_associated_SNPs_24657 0 0 0 0 0 exosome 0.438718619911631 0.438715740110284 0.29270888 0 hPsi_site_18381 iPseU_CNN:0.29270888;iRNA_PseU:0 18382 chr16 29858617 29858617 1 + G A BLCA 29858616 + 29858596 29858636 41 AGCAAGGCTCAGCAGCTGGCTGAGGTGGAGGTGAAGAAGTT AGCAAGGCTCAGCAGCTGGCTAAGGTGGAGGTGAAGAAGTT < 41bp 0.424579513297381 0.838131743920358 0.23844206 0.5406649 prediction 0.676263487840717 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29858616 chr16:29858617 nonsynonymous SNV 0.968 0 22 hPsi_associated_SNPs_24658 0 0 0 0 2 Nucleus 0.438635877800791 0.438717637854356 0.0813298 0 hPsi_site_18382 iPseU_CNN:0.0813298;iRNA_PseU:0 18383 chr9 26978207 26978207 1 + G A SKCM 26978206 + 26978186 26978226 41 CTGTCTTCTCAAATCAAAGTTGCCCATCGCCCTGTAACACA CTGTCTTCTCAAATCAAAGTTACCCATCGCCCTGTAACACA < 41bp 0.433883290053256 0.838126197218532 0.18437609 0.28049886 prediction 0.676252394437064 Functional Gain - IFT74 ENSG00000096872 CDS Human protein_coding chr9:26978206 chr9:26978207 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_24659 0 0 0 0 2 Nucleus 0.438718590258262 0.438717230983809 0 0 hPsi_site_18383 iPseU_CNN:0;iRNA_PseU:0 18384 chr1 110020445 110020445 1 + C A UCEC 110020444 + 110020424 110020464 41 CCTCTGCTCCTCCCAGGACTTCTGTGTGACTGTCTCCTTCA CCTCTGCTCCTCCCAGGACTTATGTGTGACTGTCTCCTTCA < 41bp 0.519734771950983 0.857858834117548 0.45744634 0.55816525 prediction 0.67624812433313 Functional Gain - SYPL2 ENSG00000143028 CDS Human protein_coding chr1:110020444 chr1:110020445 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24660 0 0 0 0 1 exosome 0.438718592857448 0.43871852745531 0.1163305 0 hPsi_site_18384 iPseU_CNN:0.1163305;iRNA_PseU:0 18385 chr5 110096975 110096975 1 + G A LUSC 110096974 + 110096954 110096994 41 AATTGGAAGAGTGATAGGCATGGGAGTGCCTCATAGCAAAC AATTGGAAGAGTGATAGGCATAGGAGTGCCTCATAGCAAAC < 41bp 0.458175204804474 0.83812380173228 0.339617 0.3685141 prediction 0.67624760346456 Functional Gain - SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110096974 chr5:110096975 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24661 0 0 1 0 0 Cytosol 0.438718613334729 0.43871868137907 0 0 hPsi_site_18385 iPseU_CNN:0;iRNA_PseU:0 18386 chr21 38593925 38593925 1 + G A SKCM 38593924 + 38593904 38593944 41 TTCTTGATGTCTACTCTGCATGAAGCCCTGGGCTTTCCGGC TTCTTGATGTCTACTCTGCATAAAGCCCTGGGCTTTCCGGC < 41bp 0.474792467965273 0.838123558872677 0.3470881 0.69107205 prediction 0.676247117745354 Functional Gain - DSCR9 ENSG00000230366 ncRNA_exonic Human lincRNA chr21:38593924 chr21:38593925 . . 0 22 hPsi_associated_SNPs_24662 0 0 1 0 0 unknown 0.439578177284195 0.438665803737512 0.3821441 0 hPsi_site_18386 iPseU_CNN:0.3821441;iRNA_PseU:0 18387 chr20 39794864 39794864 1 + C A UCEC 39794863 + 39794843 39794883 41 GAAAGTCCAGCACTGCCGTATCCACTCCCGGCAAGATGCTG GAAAGTCCAGCACTGCCGTATACACTCCCGGCAAGATGCTG < 41bp 0.477949517199505 0.838119997704476 0.5701231 0.75157374 prediction 0.676239995408951 Functional Gain - PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39794863 chr20:39794864 synonymous SNV . 0 22 hPsi_associated_SNPs_24663 0 0 1 0 0 Cytosol 0.438718662342683 0.43861947984062 0.36290128 0 hPsi_site_18387 iPseU_CNN:0.36290128;iRNA_PseU:0 18388 chr14 23842408 23842408 1 + C A LUAD 23842407 + 23842387 23842427 41 GGTTGCATTCTTGGCAATGGTCATGGGAACCCACACCTACA GGTTGCATTCTTGGCAATGGTAATGGGAACCCACACCTACA < 41bp 0.517100253427411 0.855215673759132 0.16867915 0.31016028 prediction 0.676230840663442 Functional Gain - IL25 ENSG00000166090 CDS Human protein_coding chr14:23842407 chr14:23842408 synonymous SNV . 0 22 hPsi_associated_SNPs_24664 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_18388 iPseU_CNN:0;iRNA_PseU:0 18389 chr13 113464990 113464990 1 + C A HNSC 113464989 + 113464969 113465009 41 GCCATGAACCAGTGTCCTGTTCATTTCATTCAGCACGGCAA GCCATGAACCAGTGTCCTGTTAATTTCATTCAGCACGGCAA < 41bp 0.483743376879298 0.838109124978719 0.51811564 0.6243357 prediction 0.676218249957437 Functional Gain - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113464989 chr13:113464990 nonsynonymous SNV 0.378 2 22 hPsi_associated_SNPs_24665 0 0 1 0 1 Endoplasmic reticulum 0.439215655213338 0.439502460691095 0.21244012 0 hPsi_site_18389 iPseU_CNN:0.21244012;iRNA_PseU:0 18390 chr17 40815038 40815038 1 + G A rs148323868 40815037 + 40815017 40815057 41 TGGGGGTACGGGTTCTGGCCTGGGCTCCTACCTCCTGGAGC TGGGGGTACGGGTTCTGGCCTAGGCTCCTACCTCCTGGAGC < 41bp 0.550187744191545 0.888295866217706 0.31339327 0.7387066 prediction 0.676216244052322 Functional Gain - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40815037 chr17:40815038 synonymous SNV . 0 22 hPsi_associated_SNPs_24666 0 0 0 0 1 Cytosol 0.438718593002344 0.438718592995126 0.4774132 0 hPsi_site_18390 iPseU_CNN:0.4774132;iRNA_PseU:0 18391 chr14 103934484 103934484 1 + G A rs116462326 103934483 + 103934463 103934503 41 CACCACAAAGTGCAGAGAAGTGTTTTTTCAAGCCAAAAGCA CACCACAAAGTGCAGAGAAGTATTTTTTCAAGCCAAAAGCA < 41bp 0.43963709301851 0.838105036856363 0.29372513 0.5219503 prediction 0.676210073712726 Functional Gain - MARK3 ENSG00000075413 CDS Human protein_coding chr14:103934483 chr14:103934484 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24667 0 0 1 0 2 Cytosol 0.438709010338484 0.438697820597822 0.0439006 0 hPsi_site_18391 iPseU_CNN:0.0439006;iRNA_PseU:0 18392 chr22 37268428 37268428 1 + G A SKCM 37268427 + 37268407 37268447 41 GAATTTCAAAGCTGGAGATGTGATCTTCCTCCTCAGTCGGA GAATTTCAAAGCTGGAGATGTAATCTTCCTCCTCAGTCGGA < 41bp 0.55907617656617 0.897181101355699 0.23746702 0.47472262 prediction 0.676209849579059 Functional Gain - NCF4 ENSG00000100365 CDS Human protein_coding chr22:37268427 chr22:37268428 synonymous SNV . 0 22 hPsi_associated_SNPs_24668 0 0 0 0 2 exosome 0.437530679103364 0.438680832513888 0 0 hPsi_site_18392 iPseU_CNN:0;iRNA_PseU:0 18393 chrX 109764803 109764803 1 + G A COAD 109764802 + 109764782 109764822 41 CTCAGGCATTTCTACCCGGCTGTGATGGCCTTGTGATGGAT CTCAGGCATTTCTACCCGGCTATGATGGCCTTGTGATGGAT < 41bp 0.457724770421303 0.83810036485787 0.30944747 0.61772615 prediction 0.676200729715739 Functional Gain - TDGF1P3 ENSG00000225366 ncRNA_exonic Human transcribed_processed_pseudogene chrX:109764802 chrX:109764803 . . 0 22 hPsi_associated_SNPs_24669 0 0 0 0 0 unknown 0.438773960345145 0.43868691473361 0.2354523 0 hPsi_site_18393 iPseU_CNN:0.2354523;iRNA_PseU:0 18394 chr15 76632810 76632810 1 + C A CHOL 76632809 + 76632789 76632829 41 CGGCCTGAGCCCGCGGGTCATCCGCGTCTGGTTCCAGAACA CGGCCTGAGCCCGCGGGTCATACGCGTCTGGTTCCAGAACA < 41bp 0.521535074756958 0.859632685828411 0.21105576 0.34312558 prediction 0.676195222142907 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76632809 chr15:76632810 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_24670 0 0 1 0 1 Cytosol 0.438718592768392 0.438718571821405 0 0 hPsi_site_18394 iPseU_CNN:0;iRNA_PseU:0 18395 chr12 110777439 110777439 1 + G A UCEC 110777438 + 110777418 110777458 41 GGGTAGTGGCAGCGACACACTGCGATGCCTGGCCCTGGCCA GGGTAGTGGCAGCGACACACTACGATGCCTGGCCCTGGCCA < 41bp 0.420714096056576 0.838097502094553 0.5761473 0.8286196 prediction 0.676195004189106 Functional Gain - ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110777438 chr12:110777439 synonymous SNV . 0 22 hPsi_associated_SNPs_24671 0 0 1 0 1 Nucleus 0.427997375358328 0.382698511222318 0.5049446 0 hPsi_site_18395 iPseU_CNN:0.5049446;iRNA_PseU:0 18396 chr1 19027222 19027222 1 + C A UCEC 19027221 + 19027201 19027241 41 CTGGCGGCGTTCAACCACCTTCTGCCAGGAGGCTTCCCACC CTGGCGGCGTTCAACCACCTTATGCCAGGAGGCTTCCCACC < 41bp 0.466759564795279 0.838092332480306 0.42691702 0.40999556 prediction 0.676184664960612 Functional Gain - PAX7 ENSG00000009709 CDS Human protein_coding chr1:19027221 chr1:19027222 nonsynonymous SNV 0.664 4 22 hPsi_associated_SNPs_24672 0 0 0 0 2 exosome 0.438718592995241 0.438718592991094 0 0 hPsi_site_18396 iPseU_CNN:0;iRNA_PseU:0 18397 chr6 158364477 158364477 1 + G A rs115356228 158364476 + 158364456 158364496 41 GGCTGCTAGTGCCATCGTGGTGTGTGGCAGGTGGGCCATCC GGCTGCTAGTGCCATCGTGGTATGTGGCAGGTGGGCCATCC < 41bp 0.46125538402185 0.838089193541463 0.36007762 0.7051317 prediction 0.676178387082925 Functional Gain - SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158364476 chr6:158364477 . . 0 22 hPsi_associated_SNPs_24673 0 0 1 0 0 Ribosome 0.438718579079659 0.438718612236995 0.4102634 0 hPsi_site_18397 iPseU_CNN:0.4102634;iRNA_PseU:0 18398 chr20 49576214 49576214 1 + G A CESC 49576213 + 49576193 49576233 41 AGTGGCAGCTTGTTGCTCTTTGATGCCCTGAGAGGGCATTT AGTGGCAGCTTGTTGCTCTTTAATGCCCTGAGAGGGCATTT < 41bp 0.443048602105698 0.838088080570483 0.23205149 0.53328013 prediction 0.676176161140966 Functional Gain - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576213 chr20:49576214 nonsynonymous SNV 0.940 4 22 hPsi_associated_SNPs_24674 0 0 1 0 0 Nucleus 0.438706317721654 0.438718197801246 0.0665602599999999 0 hPsi_site_18398 iPseU_CNN:0.0665602599999999;iRNA_PseU:0 18399 chr3 184045635 184045635 1 + G A COAD 184045634 + 184045614 184045654 41 TCAGGAGGCAGTCCAGTGCGTGCAGGAGCTGGCCTCACCCT TCAGGAGGCAGTCCAGTGCGTACAGGAGCTGGCCTCACCCT < 41bp 0.442068637697202 0.83806182221033 0.34990767 0.7855264 prediction 0.67612364442066 Functional Gain - EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184045634 chr3:184045635 synonymous SNV . 0 22 hPsi_associated_SNPs_24675 0 0 1 0 1 Nucleus 0.438638849381286 0.438717556697239 0.5710528 0 hPsi_site_18399 iPseU_CNN:0.5710528;iRNA_PseU:0 18400 chr19 47845019 47845019 1 + G A SKCM 47845018 + 47844998 47845038 41 CCAGGGCCAGGACGAAAGTGTGGACAGCAAGAAATCCACCA CCAGGGCCAGGACGAAAGTGTAGACAGCAAGAAATCCACCA < 41bp 0.445303449003981 0.83805714611893 0.33938414 0.69178283 prediction 0.676114292237861 Functional Gain - C5AR2 ENSG00000134830 CDS Human protein_coding chr19:47845018 chr19:47845019 synonymous SNV . 0 22 hPsi_associated_SNPs_24676 0 0 0 0 0 exosome 0.438718592941938 0.438718592878176 0.38356566 0 hPsi_site_18400 iPseU_CNN:0.38356566;iRNA_PseU:0 18401 chr9 125140224 125140224 1 + C A COAD 125140223 + 125140203 125140243 41 CCAGCACCAGGGCATCTGTGTCCGCTTCGGCCTTGACCGCT CCAGCACCAGGGCATCTGTGTACGCTTCGGCCTTGACCGCT < 41bp 0.468575672046465 0.838051423000111 0.302904 0.9477799 prediction 0.676102846000222 Functional Gain - PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125140223 chr9:125140224 synonymous SNV . 0 22 hPsi_associated_SNPs_24677 0 0 0 0 3 nucleolus 0.438718362241545 0.438728898921634 0.8955598 0 hPsi_site_18401 iPseU_CNN:0.8955598;iRNA_PseU:0 18402 chr14 24884881 24884881 1 + G A HNSC 24884880 + 24884860 24884900 41 CTGACCTGTCCACGTTCGTCTGCATCCACATGTCGGGCTAC CTGACCTGTCCACGTTCGTCTACATCCACATGTCGGGCTAC < 41bp 0.556846066399545 0.894895672313982 0.24518505 0.32632452 prediction 0.676099211828875 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884880 chr14:24884881 nonsynonymous SNV 0.827 2 22 hPsi_associated_SNPs_24678 0 0 0 0 0 Exosome 0.457289673038491 0.439859352060328 0 0 hPsi_site_18402 iPseU_CNN:0;iRNA_PseU:0 18403 chr4 153896422 153896422 1 + C A COAD 153896421 + 153896401 153896441 41 TGAGCCTGGGCTCAGCACAGTCCCCTCCTCTCTCGCCATTG TGAGCCTGGGCTCAGCACAGTACCCTCCTCTCTCGCCATTG < 41bp 0.521336382912888 0.859378364929431 0.32447943 0.85288537 prediction 0.676083964033086 Functional Gain - FHDC1 ENSG00000137460 CDS Human protein_coding chr4:153896421 chr4:153896422 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_24679 0 0 0 0 0 Nucleus 0.438718592995185 0.438719118233905 0.70577074 0 hPsi_site_18403 iPseU_CNN:0.70577074;iRNA_PseU:0 18404 chr17 40837398 40837398 1 + C A PAAD 40837397 + 40837377 40837417 41 CCAGGGCGACTACGTGACGCTCGAGCTGGAGGGGGCACACC CCAGGGCGACTACGTGACGCTAGAGCTGGAGGGGGCACACC < 41bp 0.480503731368691 0.838041278032968 0.19925833 0.417147 prediction 0.676082556065937 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40837397 chr17:40837398 synonymous SNV . 0 22 hPsi_associated_SNPs_24680 0 0 0 0 1 Cytosol 0.438718523657378 0.438718593131967 0 0 hPsi_site_18404 iPseU_CNN:0;iRNA_PseU:0 18405 chr15 59499919 59499919 1 + G A BLCA 59499918 + 59499898 59499938 41 GAACATAGCTGGTGTCCCTTTGAAGGATCTGAACTCTGATA GAACATAGCTGGTGTCCCTTTAAAGGATCTGAACTCTGATA < 41bp 0.460792333174676 0.838040189002101 0.45703036 0.67218244 prediction 0.676080378004202 Functional Gain - LDHAL6B ENSG00000171989 CDS Human protein_coding chr15:59499918 chr15:59499919 synonymous SNV . 0 22 hPsi_associated_SNPs_24681 0 0 0 0 0 unknown 0.436051578258916 0.438790986943829 0.34436488 0 hPsi_site_18405 iPseU_CNN:0.34436488;iRNA_PseU:0 18406 chr22 42967164 42967164 1 + G A SKCM 42967163 + 42967143 42967183 41 ACTTCATCAGCAGGGAGCTGTGTGCGCATTCCATCAGGAAG ACTTCATCAGCAGGGAGCTGTATGCGCATTCCATCAGGAAG < 41bp 0.552249873935363 0.890287469273612 0.7213244 0.7987551 prediction 0.676075190676498 Functional Gain - SERHL2 ENSG00000183569 CDS Human protein_coding chr22:42967163 chr22:42967164 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24682 0 0 1 0 2 chromatin 0.438896663038365 0.438878370178877 0.1548614 0 hPsi_site_18406 iPseU_CNN:0.1548614;iRNA_PseU:0 18407 chr10 124152748 124152748 1 + G A GBM 124152747 + 124152727 124152767 41 TGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAA TGGATCGTCAGAATCGCATTTATGGTTTTCTAGACATTGAA < 41bp 0.548019247801815 0.886055117560365 0.20660543 0.2668771 prediction 0.6760717395171 Functional Gain - PLEKHA1 ENSG00000107679 CDS Human protein_coding chr10:124152747 chr10:124152748 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_24683 0 0 1 0 0 Ribosome 0.438718915479429 0.438719408053299 0 0 hPsi_site_18407 iPseU_CNN:0;iRNA_PseU:0 18408 chr5 177574570 177574570 1 + G A LUSC 177574569 + 177574549 177574589 41 TGTGGCGCTGCCTGTGTTGATGAACATCAAGGCTGTGATTG TGTGGCGCTGCCTGTGTTGATAAACATCAAGGCTGTGATTG < 41bp 0.557897182156728 0.895926086014716 0.19467667 0.28311086 prediction 0.676057807715976 Functional Gain - RMND5B ENSG00000145916 CDS Human protein_coding chr5:177574569 chr5:177574570 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_24684 0 0 1 0 2 Cytosol 0.432750657181896 0.439058661771551 0 0 hPsi_site_18408 iPseU_CNN:0;iRNA_PseU:0 18409 chr5 131409537 131409537 1 + G A UCEC 131409536 + 131409516 131409556 41 GATGTGGCTGCAGAGCCTGCTGCTCTTGGGCACTGTGGCCT GATGTGGCTGCAGAGCCTGCTACTCTTGGGCACTGTGGCCT < 41bp 0.542036583630822 0.880059834830296 0.30570042 0.8088528 prediction 0.676046502398949 Functional Gain - CSF2 ENSG00000164400 CDS Human protein_coding chr5:131409536 chr5:131409537 synonymous SNV . 0 22 hPsi_associated_SNPs_24685 0 0 0 0 0 exosome 0.43647336004685 0.437595034130117 0.6177056 0 hPsi_site_18409 iPseU_CNN:0.6177056;iRNA_PseU:0 18410 chr19 41096750 41096750 1 + C A rs116054173 41096749 + 41096729 41096769 41 CCAGCCCCTCACCCCGCATCTCCCTCACCAGGTAGCCACAA CCAGCCCCTCACCCCGCATCTACCTCACCAGGTAGCCACAA < 41bp 0.472759029783406 0.838020558273255 0.19588631 0.74518764 prediction 0.67604111654651 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41096749 chr19:41096750 nonsynonymous SNV 0.623 1 22 hPsi_associated_SNPs_24686 0 0 0 0 1 Ribosome 0.438718591851599 0.438719287410574 0.49037528 0 hPsi_site_18410 iPseU_CNN:0.49037528;iRNA_PseU:0 18411 chr7 148951470 148951470 1 + G A OV 148951469 + 148951449 148951489 41 CCAGCGGGAGCGGGGTGGGCTGGCCCTGGAGCCCGGAAGGC CCAGCGGGAGCGGGGTGGGCTAGCCCTGGAGCCCGGAAGGC < 41bp 0.439856283412263 0.838016788386223 0.15313298 0.2649945 prediction 0.676033576772446 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148951469 chr7:148951470 synonymous SNV . 0 22 hPsi_associated_SNPs_24687 0 0 0 0 0 Cytosol 0.438718619923509 0.438786516037562 0 0 hPsi_site_18411 iPseU_CNN:0;iRNA_PseU:0 18412 chr3 40573588 40573588 1 + G A UCEC 40573587 + 40573567 40573607 41 AGCCTCTGAAGAAACAGAGTTGCACAGAATGCCAGTAGGAG AGCCTCTGAAGAAACAGAGTTACACAGAATGCCAGTAGGAG < 41bp 0.45975374492984 0.83800149435952 0.24504977 0.6307506 prediction 0.67600298871904 Functional Gain - ZNF621 ENSG00000172888 CDS Human protein_coding chr3:40573587 chr3:40573588 synonymous SNV . 0 22 hPsi_associated_SNPs_24688 0 0 1 0 1 Nucleus 0.438718574334962 0.438718482612041 0.2615012 0 hPsi_site_18412 iPseU_CNN:0.2615012;iRNA_PseU:0 18413 chr1 155041589 155041589 1 + G A UCEC 155041588 + 155041568 155041608 41 CCGACAAGATGGAGCATTGATGGGGGAGATCAGAGGGTCTG CCGACAAGATGGAGCATTGATAGGGGAGATCAGAGGGTCTG < 41bp 0.536255046538514 0.874248315113512 0.24786991 0.32120407 prediction 0.675986537149996 Functional Gain - EFNA4 ENSG00000243364 CDS Human protein_coding chr1:155041588 chr1:155041589 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_24689 0 0 0 0 1 Ribosome 0.438721448000106 0.438718654110376 0 0 hPsi_site_18413 iPseU_CNN:0;iRNA_PseU:0 18414 chr17 40665882 40665882 1 + G A OV 40665881 + 40665861 40665901 41 GGTTTCCTCCCACGACAGTTTGACTTTGGGGACACCATGGT GGTTTCCTCCCACGACAGTTTAACTTTGGGGACACCATGGT < 41bp 0.427845137340113 0.837992907832547 0.33235085 0.4345941 prediction 0.675985815665094 Functional Gain - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40665881 chr17:40665882 nonsynonymous SNV 0.943 2 22 hPsi_associated_SNPs_24690 0 0 1 0 1 Endoplasmic reticulum 0.438718726712985 0.438718593297916 0 0 hPsi_site_18414 iPseU_CNN:0;iRNA_PseU:0 18415 chr19 15852421 15852421 1 + G A rs372485799 15852420 + 15852400 15852440 41 CCTCTCCATCTCTGAGATTCTGTTCACTGTTGCCATCACCC CCTCTCCATCTCTGAGATTCTATTCACTGTTGCCATCACCC < 41bp 0.460501764701336 0.837990715855843 0.25018078 0.32659847 prediction 0.675981431711687 Functional Gain - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852420 chr19:15852421 synonymous SNV . 0 22 hPsi_associated_SNPs_24691 0 0 0 0 0 unknown 0.438260841999367 0.439188276347498 0 0 hPsi_site_18415 iPseU_CNN:0;iRNA_PseU:0 18416 chr3 64184592 64184592 1 + C A LUSC 64184591 + 64184571 64184611 41 CTTCTCCATCTCCAGCGGCATCACTGTCACCATGTGCTCCT CTTCTCCATCTCCAGCGGCATAACTGTCACCATGTGCTCCT < 41bp 0.503696413227006 0.841686692577341 0.25481427 0.48114115 prediction 0.67598055870067 Functional Gain - PRICKLE2 ENSG00000163637 CDS Human protein_coding chr3:64184591 chr3:64184592 synonymous SNV . 0 22 hPsi_associated_SNPs_24692 0 0 0 0 0 Endoplasmic reticulum 0.437421105689254 0.438701116278515 0 0 hPsi_site_18416 iPseU_CNN:0;iRNA_PseU:0 18417 chr11 93530749 93530749 1 + G A UCEC 93530748 + 93530728 93530768 41 ATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAG ATGATGCCTCATCCAGCAAGTACACCTTTTGGCCACAAGAG < 41bp 0.427033336676191 0.837981639190233 0.23990059 0.3719126 prediction 0.675963278380467 Functional Gain - MED17 ENSG00000042429 CDS Human protein_coding chr11:93530748 chr11:93530749 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_24693 0 0 1 0 1 Cytosol 0.438761425631326 0.438720103544323 0 0 hPsi_site_18417 iPseU_CNN:0;iRNA_PseU:0 18418 chr19 50391031 50391031 1 + C A UCEC 50391030 + 50391010 50391050 41 CCTGCTGGTGGCCTGCGCCATCCTGGACATGGAGAGGGACA CCTGCTGGTGGCCTGCGCCATACTGGACATGGAGAGGGACA < 41bp 0.476100245461898 0.837978167167133 0.27447692 0.80309415 prediction 0.675956334334266 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50391030 chr19:50391031 synonymous SNV . 0 22 hPsi_associated_SNPs_24694 0 0 1 0 2 membrane 0.438817065132579 0.437083564114449 0.6061883 0 hPsi_site_18418 iPseU_CNN:0.6061883;iRNA_PseU:0 18419 chr1 155851194 155851194 1 + C A UCEC 155851193 + 155851173 155851213 41 TGAGGTGGTGGGGAGGCTGATCCTGGGGGCACACAGTGTCA TGAGGTGGTGGGGAGGCTGATACTGGGGGCACACAGTGTCA < 41bp 0.4899185536253 0.83797633177206 0.17285472 0.5011165 prediction 0.67595266354412 Functional Gain - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155851193 chr1:155851194 synonymous SNV . 0 22 hPsi_associated_SNPs_24695 0 0 1 0 0 Nucleus 0.441868899084599 0.424067498960085 0.00223299999999993 0 hPsi_site_18419 iPseU_CNN:0.00223299999999993;iRNA_PseU:0 18420 chr15 98513859 98513859 1 + C A UCEC 98513858 + 98513838 98513878 41 TGTGGTATCAGAGGAAGAATTCTCTAGACACATTCCTCCTT TGTGGTATCAGAGGAAGAATTATCTAGACACATTCCTCCTT < 41bp 0.516571298742543 0.854547299843389 0.35571164 0.6821141 prediction 0.675952002201691 Functional Gain - ARRDC4 ENSG00000140450 CDS Human protein_coding chr15:98513858 chr15:98513859 nonsynonymous SNV 0.705 0 22 hPsi_associated_SNPs_24696 0 0 1 0 1 nucleoplasm 0.438759910400005 0.445978123245561 0.3642282 0 hPsi_site_18420 iPseU_CNN:0.3642282;iRNA_PseU:0 18421 chr22 38219503 38219503 1 + G A LUSC 38219502 + 38219482 38219522 41 CTTTGCCCTAATCTTCCTGCTGGGCACAGTGGGCAATGGGC CTTTGCCCTAATCTTCCTGCTAGGCACAGTGGGCAATGGGC < 41bp 0.459172820920234 0.83796546899136 0.20543331 0.2807874 prediction 0.67593093798272 Functional Gain - GALR3 ENSG00000128310 CDS Human protein_coding chr22:38219502 chr22:38219503 synonymous SNV . 0 22 hPsi_associated_SNPs_24697 0 0 0 0 0 nucleus 0.438718582928066 0.438716485230072 0 0 hPsi_site_18421 iPseU_CNN:0;iRNA_PseU:0 18422 chr1 110213993 110213993 1 + C A COAD 110213992 + 110213972 110214012 41 CTGGGGAAGCAGCCATGGTTTCTTGGGGACAAGGTAATGGG CTGGGGAAGCAGCCATGGTTTATTGGGGACAAGGTAATGGG < 41bp 0.517350757770573 0.855315676644799 0.5694073 0.7619742 prediction 0.675929837748451 Functional Gain - GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110213992 chr1:110213993 nonsynonymous SNV 0.231 1 22 hPsi_associated_SNPs_24698 0 0 1 0 2 Cytosol 0.438718592898313 0.438718593759471 0.3851338 0 hPsi_site_18422 iPseU_CNN:0.3851338;iRNA_PseU:0 18423 chr14 102808469 102808469 1 + G A UCEC 102808468 + 102808448 102808488 41 GTGTCTCAGGAGGAGGACATTGTCACAGTGACTGATGCAGA GTGTCTCAGGAGGAGGACATTATCACAGTGACTGATGCAGA < 41bp 0.552458758891266 0.890419287911117 0.28053138 0.48679385 prediction 0.675921058039702 Functional Gain - ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102808468 chr14:102808469 nonsynonymous SNV 0.081 3 22 hPsi_associated_SNPs_24699 0 0 1 0 1 chromatin 0.440158203800893 0.439080601748951 0 0 hPsi_site_18423 iPseU_CNN:0;iRNA_PseU:0 18424 chr5 178506622 178506622 1 + G A STAD 178506621 + 178506601 178506641 41 GGGAGAACCTTCACACGTATTGTAACCCTTATCGAACATCA GGGAGAACCTTCACACGTATTATAACCCTTATCGAACATCA < 41bp 0.466407270427387 0.837956481834202 0.65870225 0.768209 prediction 0.675912963668404 Functional Gain - ZNF354C ENSG00000177932 CDS Human protein_coding chr5:178506621 chr5:178506622 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24700 0 0 0 0 0 exosome 0.438299120760171 0.442881724117794 0.2190135 0 hPsi_site_18424 iPseU_CNN:0.2190135;iRNA_PseU:0 18425 chr14 101198408 101198408 1 + G A STAD 101198407 + 101198387 101198427 41 GCCTGCTCCTCGGCCCCCTGTGCCAACAACAGGACCTGCGT GCCTGCTCCTCGGCCCCCTGTACCAACAACAGGACCTGCGT < 41bp 0.428659193099476 0.837954955325013 0.27830356 0.6608516 prediction 0.675909910650026 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101198407 chr14:101198408 nonsynonymous SNV 0.902 0 22 hPsi_associated_SNPs_24701 0 0 1 0 1 Endoplasmic reticulum 0.43874044099048 0.439130970245412 0.3217032 0 hPsi_site_18425 iPseU_CNN:0.3217032;iRNA_PseU:0 18426 chr10 124249002 124249002 1 + G A SKCM 124249001 + 124248981 124249021 41 GGGTTTATTGTGTCGGAAGATGGACTGATCGTGACAAATGC GGGTTTATTGTGTCGGAAGATAGACTGATCGTGACAAATGC < 41bp 0.429864158562007 0.837949972242971 0.30087936 0.44231477 prediction 0.675899944485943 Functional Gain - HTRA1 ENSG00000166033 CDS Human protein_coding chr10:124249001 chr10:124249002 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24702 0 0 0 0 1 Ribosome 0.438890460587208 0.438717571121585 0 0 hPsi_site_18426 iPseU_CNN:0;iRNA_PseU:0 18427 chr11 22301255 22301255 1 + G A COAD 22301254 + 22301234 22301274 41 GGAATTAATTCTAATGAATTTGCCAAGCATGTCATGATTGA GGAATTAATTCTAATGAATTTACCAAGCATGTCATGATTGA < 41bp 0.466948410483188 0.837948206151711 0.17061552 0.26464212 prediction 0.675896412303422 Functional Gain - ANO5 ENSG00000171714 CDS Human protein_coding chr11:22301254 chr11:22301255 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24703 0 0 1 0 0 chromatin 0.440277951394824 0.439058205395528 0 0 hPsi_site_18427 iPseU_CNN:0;iRNA_PseU:0 18428 chr16 105857 105857 1 + G A CESC 105856 + 105836 105876 41 GTGCAGCTCAAGCAGGAGCGTGAAGGGGGCATTCAGCACAT GTGCAGCTCAAGCAGGAGCGTAAAGGGGGCATTCAGCACAT < 41bp 0.433844825568065 0.837946703861472 0.23743272 0.7671932 prediction 0.675893407722944 Functional Gain - SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:105856 chr16:105857 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24704 0 0 1 0 2 Ribosome 0.444940925054242 0.43873064722347 0.5343864 0 hPsi_site_18428 iPseU_CNN:0.5343864;iRNA_PseU:0 18429 chr12 53899931 53899931 1 + G A BLCA 53899930 + 53899910 53899950 41 AGATCATGGCAGGCAGCAAGTGAAGCCCCAGCTGGACTCAT AGATCATGGCAGGCAGCAAGTAAAGCCCCAGCTGGACTCAT < 41bp 0.541704615734895 0.879644439241047 0.45034403 0.6788395 prediction 0.675879647012303 Functional Gain - TARBP2 ENSG00000139546 CDS Human protein_coding chr12:53899930 chr12:53899931 synonymous SNV . 0 22 hPsi_associated_SNPs_24705 0 0 1 0 0 Cytosol 0.438716571399332 0.438715908857231 0.357679 0 hPsi_site_18429 iPseU_CNN:0.357679;iRNA_PseU:0 18430 chr8 86126837 86126837 1 + G A UCEC 86126836 + 86126816 86126856 41 TGTAGCTTCATCAACTGGTTTGCTTTCATGACGCTGCTGAG TGTAGCTTCATCAACTGGTTTACTTTCATGACGCTGCTGAG < 41bp 0.455233187474504 0.837939221569562 0.27693123 0.3487988 prediction 0.675878443139125 Functional Gain - C8orf59 ENSG00000176731 CDS Human protein_coding chr8:86126836 chr8:86126837 synonymous SNV . 0 22 hPsi_associated_SNPs_24706 0 0 1 1 0 Ribosome 0.441023677671099 0.450392392917443 0 0 hPsi_site_18430 iPseU_CNN:0;iRNA_PseU:0 18431 chrX 65409696 65409696 1 + C A BLCA 65409695 + 65409675 65409715 41 ACTGATGTGGCTAACATCTTTCCAGCCACCTTTGTGACTGC ACTGATGTGGCTAACATCTTTACAGCCACCTTTGTGACTGC < 41bp 0.475508030333541 0.83793368409823 0.4328714 0.5692402 prediction 0.67586736819646 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65409695 chrX:65409696 nonsynonymous SNV 0.961 5 22 hPsi_associated_SNPs_24707 0 0 1 0 1 Nucleus 0.43871433547772 0.438708151881108 0.1384804 0 hPsi_site_18431 iPseU_CNN:0.1384804;iRNA_PseU:0 18432 chr8 42207554 42207554 1 + C A LUSC 42207553 + 42207533 42207573 41 GGATGATACGAGTTCATCCATCAATTTCCTGACTCGAGTTA GGATGATACGAGTTCATCCATAAATTTCCTGACTCGAGTTA < 41bp 0.507317137085149 0.845249809393479 0.30022937 0.42121804 prediction 0.67586534461666 Functional Gain - POLB ENSG00000070501 CDS Human protein_coding chr8:42207553 chr8:42207554 synonymous SNV . 0 22 hPsi_associated_SNPs_24708 0 0 1 0 2 Cytosol 0.438777887834109 0.438719579650536 0 0 hPsi_site_18432 iPseU_CNN:0;iRNA_PseU:0 18433 chr3 142496544 142496544 1 + C A LIHC 142496543 + 142496523 142496563 41 TTAACAGAGGAGGATCCAATTCTGAGAGCATTTGAACTTAG TTAACAGAGGAGGATCCAATTATGAGAGCATTTGAACTTAG < 41bp 0.492714959912007 0.837931833338937 0.23648751 0.2416825 prediction 0.675863666677874 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142496543 chr3:142496544 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24709 0 0 1 0 2 Ribosome 0.438595116586041 0.436734465263649 0 0 hPsi_site_18433 iPseU_CNN:0;iRNA_PseU:0 18434 chr12 107125965 107125965 1 + C A COAD 107125964 + 107125944 107125984 41 ACGTGCTCTACCTGTTAGAATCTCTGCACTGTCAGGAGCGG ACGTGCTCTACCTGTTAGAATATCTGCACTGTCAGGAGCGG < 41bp 0.47919485342591 0.837927877756578 0.27501196 0.32877085 prediction 0.675855755513155 Functional Gain - RFX4 ENSG00000111783 CDS Human protein_coding chr12:107125964 chr12:107125965 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24710 0 0 0 0 1 nucleoplasm 0.438718461796016 0.438718410000148 0 0 hPsi_site_18434 iPseU_CNN:0;iRNA_PseU:0 18435 chr1 95710026 95710026 1 + C A HNSC 95710025 + 95710005 95710045 41 GCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGCA GCAGAATCTCAGGCATATCCTAAGCCAACCAGAAACTGGCA < 41bp 0.511326306107171 0.849253930073951 0.107860744 0.16424245 prediction 0.67585524793356 Functional Gain - RWDD3 ENSG00000122481 CDS Human protein_coding chr1:95710025 chr1:95710026 synonymous SNV . 0 22 hPsi_associated_SNPs_24711 0 0 1 0 0 Cytosol 0.438718339973334 0.438718903562376 0 0 hPsi_site_18435 iPseU_CNN:0;iRNA_PseU:0 18436 chr5 137519714 137519714 1 + G A BLCA 137519713 + 137519693 137519733 41 TCAGAAGAGTGGTGAACGGTTGAAGGAAGCAGGAAACATTA TCAGAAGAGTGGTGAACGGTTAAAGGAAGCAGGAAACATTA < 41bp 0.557310740101108 0.895232749798046 0.33374003 0.7600604 prediction 0.675844019393876 Functional Gain - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137519713 chr5:137519714 synonymous SNV . 0 22 hPsi_associated_SNPs_24712 0 0 1 0 2 Nucleus 0.438718593808982 0.438718825659618 0.5201208 0 hPsi_site_18436 iPseU_CNN:0.5201208;iRNA_PseU:0 18437 chr19 55857947 55857947 1 + G A CESC 55857946 + 55857926 55857966 41 CTGGACAAGTACCAGCTGCGTGAGACCAAGCGGCGGCTGCA CTGGACAAGTACCAGCTGCGTAAGACCAAGCGGCGGCTGCA < 41bp 0.431039016438063 0.83792046247131 0.23813283 0.7142464 prediction 0.67584092494262 Functional Gain - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55857946 chr19:55857947 nonsynonymous SNV 0.927 2 22 hPsi_associated_SNPs_24713 0 0 1 0 1 chromatin 0.438722173406618 0.438718592531068 0.4284928 0 hPsi_site_18437 iPseU_CNN:0.4284928;iRNA_PseU:0 18438 chr16 4387072 4387072 1 + G A COAD 4387071 + 4387051 4387091 41 GCCCGGCTTACCCCTACCCCTGGCCCCCGGCCCCCTTGACC GCCCGGCTTACCCCTACCCCTAGCCCCCGGCCCCCTTGACC < 41bp 0.447116701780244 0.837914710111766 0.11231178 0.18103144 prediction 0.675829420223532 Functional Gain - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4387071 chr16:4387072 synonymous SNV . 0 22 hPsi_associated_SNPs_24714 0 0 0 0 0 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0 0 hPsi_site_18438 iPseU_CNN:0;iRNA_PseU:0 18439 chr5 135207360 135207360 1 + G A STAD 135207359 + 135207339 135207379 41 AGTGGATCACACCTGAGGCCTGCACAGGCCCCAGCCCCTGT AGTGGATCACACCTGAGGCCTACACAGGCCCCAGCCCCTGT < 41bp 0.438926878132037 0.837908279382134 0.23289767 0.40862817 prediction 0.675816558764269 Functional Gain - SLC25A48 ENSG00000145832 CDS Human protein_coding chr5:135207359 chr5:135207360 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_24715 0 0 0 0 0 Cytosol 0.438719490795264 0.438741799716186 0 0 hPsi_site_18439 iPseU_CNN:0;iRNA_PseU:0 18440 chr7 77256082 77256082 1 + G A UCEC 77256081 + 77256061 77256101 41 GCCACCGGAACCTCATCCAGTGCCACCCATCTTGACACCTT GCCACCGGAACCTCATCCAGTACCACCCATCTTGACACCTT < 41bp 0.436786717146691 0.837908217641772 0.19927263 0.4291336 prediction 0.675816435283545 Functional Gain - PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256081 chr7:77256082 synonymous SNV . 0 22 hPsi_associated_SNPs_24716 0 0 1 0 1 Ribosome 0.438718593028441 0.43871860104979 0 0 hPsi_site_18440 iPseU_CNN:0;iRNA_PseU:0 18441 chr2 121747597 121747597 1 + G A rs553925191 121747596 + 121747576 121747616 41 TACAGCAGGCTTTGGCCTAGTGCAGCCCCGGCCTCCCCTCG TACAGCAGGCTTTGGCCTAGTACAGCCCCGGCCTCCCCTCG < 41bp 0.455971769385281 0.837906812768342 0.33054924 0.6995707 prediction 0.675813625536683 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121747596 chr2:121747597 synonymous SNV . 0 22 hPsi_associated_SNPs_24717 0 0 0 0 0 Endoplasmic reticulum 0.438718592969768 0.438718592994757 0.3991414 0 hPsi_site_18441 iPseU_CNN:0.3991414;iRNA_PseU:0 18442 chr4 152212580 152212580 1 + G A rs139243794 152212579 + 152212559 152212599 41 AGGGCTGGGAAGAGAATGCATGGAGATTTAGTCCCAGGGGC AGGGCTGGGAAGAGAATGCATAGAGATTTAGTCCCAGGGGC < 41bp 0.464934945267466 0.837904922917923 0.29418162 0.3589627 prediction 0.675809845835845 Functional Gain - PRSS48 ENSG00000189099 CDS Human protein_coding chr4:152212579 chr4:152212580 stopgain 0.001 0 22 hPsi_associated_SNPs_24718 0 0 0 0 0 nucleus 0.438718592995102 0.438718593513562 0 0 hPsi_site_18442 iPseU_CNN:0;iRNA_PseU:0 18443 chr17 18682422 18682422 1 + G A SKCM 18682421 + 18682401 18682441 41 TGAGTTCGTGCTGTTGACCGTGAAGGAGGAGAAGGAGCACC TGAGTTCGTGCTGTTGACCGTAAAGGAGGAGAAGGAGCACC < 41bp 0.550229953406496 0.888134175179204 0.25394574 0.63273853 prediction 0.675808443545415 Functional Gain - FBXW10 ENSG00000171931 CDS Human protein_coding chr17:18682421 chr17:18682422 synonymous SNV . 0 22 hPsi_associated_SNPs_24719 0 0 0 0 1 Nucleus 0.438718514191116 0.438718593170659 0.26547706 0 hPsi_site_18443 iPseU_CNN:0.26547706;iRNA_PseU:0 18444 chr19 7852420 7852420 1 + G A rs192234679 7852419 + 7852399 7852439 41 TATCTCTGCCCAGGTCTCGGTGCCTGCACCGCCATAGACAC TATCTCTGCCCAGGTCTCGGTACCTGCACCGCCATAGACAC < 41bp 0.503260565754744 0.841162432567932 0.32855785 0.9169692 prediction 0.675803733626377 Functional Gain - CLEC4GP1 ENSG00000268297 upstream Human unprocessed_pseudogene chr19:7852419 chr19:7852420 . . 0 22 hPsi_associated_SNPs_24720 0 0 0 0 2 unknown 0.438732995006407 0.439373423053151 0.8339384 0 hPsi_site_18444 iPseU_CNN:0.8339384;iRNA_PseU:0 18445 chr14 32295846 32295846 1 + G A UCEC 32295845 + 32295825 32295865 41 CTTTGGCTAGGTGCTGTGATTGTCTCCACGCCCCAGGACAT CTTTGGCTAGGTGCTGTGATTATCTCCACGCCCCAGGACAT < 41bp 0.447551515876978 0.837890675103182 0.46206212 0.6643288 prediction 0.675781350206365 Functional Gain - NUBPL ENSG00000151413 CDS Human protein_coding chr14:32295845 chr14:32295846 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_24721 0 0 1 0 2 chromatin 0.438721598428988 0.438768992071865 0.3286576 0 hPsi_site_18445 iPseU_CNN:0.3286576;iRNA_PseU:0 18446 chr15 81592014 81592014 1 + C A LUAD 81592013 + 81591993 81592033 41 AGCAGCACTGTGAAGAAAGGTCCTCCTGTGGCTCCCAAGCC AGCAGCACTGTGAAGAAAGGTACTCCTGTGGCTCCCAAGCC < 41bp 0.516806806756085 0.854693841565518 0.23495725 0.8070384 prediction 0.675774069618866 Functional Gain - IL16 ENSG00000172349 CDS Human protein_coding chr15:81592013 chr15:81592014 nonsynonymous SNV 0.456 4 22 hPsi_associated_SNPs_24722 0 0 0 0 0 Nucleus 0.438755108617572 0.438718594873525 0.6140768 0 hPsi_site_18446 iPseU_CNN:0.6140768;iRNA_PseU:0 18447 chr2 219501328 219501328 1 + G A rs1055816 219501327 + 219501307 219501347 41 CATTTCACGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGA CATTTCACGGGAAGGGTTGGTATGCTGGCTTTAGACGGGGA < 41bp 0.538345832064999 0.876228913870302 0.22099596 0.40798467 prediction 0.675766163610606 Functional Gain - PLCD4 ENSG00000115556 UTR3 Human protein_coding chr2:219501327 chr2:219501328 . . 0 22 hPsi_associated_SNPs_24723 0 0 0 5 0 chromatin 0.438718581168319 0.438718593042677 0 0 hPsi_site_18447 iPseU_CNN:0;iRNA_PseU:0 18448 chr14 20296192 20296192 1 + G A LUAD 20296191 + 20296171 20296211 41 CTGCACCGACACATTTGTGGTGGAGCTTCTGATGGTCTTCA CTGCACCGACACATTTGTGGTAGAGCTTCTGATGGTCTTCA < 41bp 0.546147190736054 0.884022898154579 0.36437193 0.4435384 prediction 0.67575141483705 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20296191 chr14:20296192 synonymous SNV . 0 22 hPsi_associated_SNPs_24724 0 0 0 0 0 unknown 0.438718592993739 0.438799949921594 0 0 hPsi_site_18448 iPseU_CNN:0;iRNA_PseU:0 18449 chr13 25672209 25672209 1 + G A DLBC 25672208 + 25672188 25672228 41 ACCCAGAAAGCAGTTAACAGTGCTACCGGTGTTCCAACTGT ACCCAGAAAGCAGTTAACAGTACTACCGGTGTTCCAACTGT < 41bp 0.459486467761728 0.837865680260817 0.3063561 0.4124715 prediction 0.675731360521633 Functional Gain - PABPC3 ENSG00000151846 CDS Human protein_coding chr13:25672208 chr13:25672209 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_24725 0 0 0 0 0 Cytosol 0.438718935098492 0.438718605351106 0 0 hPsi_site_18449 iPseU_CNN:0;iRNA_PseU:0 18450 chrX 15833894 15833894 1 + G A GBM 15833893 + 15833873 15833913 41 ATGGAGCAGTGCAGGAGGGATGACTATGACCCTGACGCAAG ATGGAGCAGTGCAGGAGGGATAACTATGACCCTGACGCAAG < 41bp 0.432230624525583 0.83786476189403 0.3265111 0.683488 prediction 0.67572952378806 Functional Gain - ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15833893 chrX:15833894 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_24726 0 0 1 0 1 Cytosol 0.438717784062116 0.438713847719074 0.366976 0 hPsi_site_18450 iPseU_CNN:0.366976;iRNA_PseU:0 18451 chr1 18960970 18960970 1 + C A UCEC 18960969 + 18960949 18960989 41 CACGGCTGCGTCTCCAAGATTCTTTGCCGCTACCAGGAGAC CACGGCTGCGTCTCCAAGATTATTTGCCGCTACCAGGAGAC < 41bp 0.47842085459165 0.837863399815455 0.45150042 0.46098855 prediction 0.675726799630909 Functional Gain - PAX7 ENSG00000009709 CDS Human protein_coding chr1:18960969 chr1:18960970 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_24727 0 0 0 0 0 exosome 0.438745286365479 0.441360427903068 0 0 hPsi_site_18451 iPseU_CNN:0;iRNA_PseU:0 18452 chr1 155039342 155039342 1 + G A rs201123791 155039341 + 155039321 155039361 41 ATGGTGGACTGGCCAGGCTATGAGTCCTGCCAGGCAGAGGG ATGGTGGACTGGCCAGGCTATAAGTCCTGCCAGGCAGAGGG < 41bp 0.431531353776543 0.83785366781536 0.26346713 0.51670223 prediction 0.67570733563072 Functional Gain - EFNA4 ENSG00000243364 CDS Human protein_coding chr1:155039341 chr1:155039342 nonsynonymous SNV 0.941 0 22 hPsi_associated_SNPs_24728 0 0 1 0 0 Ribosome 0.438718603664104 0.438718592995461 0.0334044600000001 0 hPsi_site_18452 iPseU_CNN:0.0334044600000001;iRNA_PseU:0 18453 chr15 75310764 75310764 1 + G A SKCM 75310763 + 75310743 75310783 41 TGGCCTCTTCCTGCAGCGGCTGGATTGCTACCATCTCCTTC TGGCCTCTTCCTGCAGCGGCTAGATTGCTACCATCTCCTTC < 41bp 0.423588450890307 0.837850990384654 0.59848267 0.8483283 prediction 0.675701980769309 Functional Gain - SCAMP5 ENSG00000198794 CDS Human protein_coding chr15:75310763 chr15:75310764 stopgain 0.998 1 22 hPsi_associated_SNPs_24729 0 0 0 0 2 cytosol 0.438498115921269 0.438730873393933 0.49969126 0 hPsi_site_18453 iPseU_CNN:0.49969126;iRNA_PseU:0 18454 chr16 90021662 90021662 1 + C A COAD 90021661 + 90021641 90021681 41 CGGCCTGTCTGAGGACCACTTCTCCCGCCCTGTGGTAAGGT CGGCCTGTCTGAGGACCACTTATCCCGCCCTGTGGTAAGGT < 41bp 0.484618565104317 0.837848417793938 0.26604688 0.2985917 prediction 0.675696835587877 Functional Gain - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90021661 chr16:90021662 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24730 0 0 1 0 2 Ribosome 0.438600367409736 0.438721426141086 0 0 hPsi_site_18454 iPseU_CNN:0;iRNA_PseU:0 18455 chr11 17793580 17793580 1 + C A LUAD 17793579 + 17793559 17793599 41 GCTGGGCTTCCTGCGCGTCGTCCGCTTCGTGCGCATCTTGC GCTGGGCTTCCTGCGCGTCGTACGCTTCGTGCGCATCTTGC < 41bp 0.482876406331858 0.837835823930936 0.26996058 0.83999413 prediction 0.675671647861871 Functional Gain - KCNC1 ENSG00000129159 CDS Human protein_coding chr11:17793579 chr11:17793580 synonymous SNV . 0 22 hPsi_associated_SNPs_24731 0 0 0 0 0 exosome 0.438718312836086 0.438720654430836 0.67998826 0 hPsi_site_18455 iPseU_CNN:0.67998826;iRNA_PseU:0 18456 chr11 65647711 65647711 1 + C A LUSC 65647710 + 65647690 65647730 41 GCTAGAGCTGAAAGAGGCCTTCAAGTTGTTCCAGATCCAGT GCTAGAGCTGAAAGAGGCCTTAAAGTTGTTCCAGATCCAGT < 41bp 0.485634589248775 0.837835306653767 0.37794203 0.41535676 prediction 0.675670613307534 Functional Gain - CTSW ENSG00000172543 CDS Human protein_coding chr11:65647710 chr11:65647711 nonsynonymous SNV 0.061 5 22 hPsi_associated_SNPs_24732 0 0 0 0 2 exosome 0.443261347946445 0.438476687527237 0 0 hPsi_site_18456 iPseU_CNN:0;iRNA_PseU:0 18457 chr1 27632830 27632830 1 + G A OV 27632829 + 27632809 27632849 41 GGGGGTGCCGGGGCCTCTGATGATGAGGACAGCTCTGAGGG GGGGGTGCCGGGGCCTCTGATAATGAGGACAGCTCTGAGGG < 41bp 0.44329828090044 0.837829716888208 0.39228696 0.5757158 prediction 0.675659433776415 Functional Gain - WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27632829 chr1:27632830 nonsynonymous SNV 0.969 1 22 hPsi_associated_SNPs_24733 0 0 1 0 0 Cytosol 0.438718565680767 0.438718598412249 0.1514316 0 hPsi_site_18457 iPseU_CNN:0.1514316;iRNA_PseU:0 18458 chr22 25601211 25601211 1 + C A UCEC 25601210 + 25601190 25601230 41 AGTCCACATCACAAGCTGCATCTGTTTGAGAACCCAGCTTT AGTCCACATCACAAGCTGCATATGTTTGAGAACCCAGCTTT < 41bp 0.487794343792314 0.837827448110927 0.32307634 0.33327448 prediction 0.675654896221854 Functional Gain - CRYBB3 ENSG00000100053 CDS Human protein_coding chr22:25601210 chr22:25601211 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_24734 0 0 0 0 1 exosome 0.43894297046586 0.439188887888063 0 0 hPsi_site_18458 iPseU_CNN:0;iRNA_PseU:0 Mean corpuscular hemoglobin 18459 chr19 56185344 56185344 1 + G A HNSC 56185343 + 56185323 56185363 41 GTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCA GTTTGACTGCCAGAAAGCCATACAGGGCCTGACGGGCCGCA < 41bp 0.546368424398934 0.884194773017562 0.3097264 0.34109682 prediction 0.675652697237255 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56185343 chr19:56185344 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24735 0 0 1 0 1 Ribosome 0.438847820892964 0.438717380882659 0 0 hPsi_site_18459 iPseU_CNN:0;iRNA_PseU:0 18460 chr19 55424101 55424101 1 + G A LUSC 55424100 + 55424080 55424120 41 TGCCCAGAATCTCCTTCGGATGGGCCTGGCCTTTCTAGTCC TGCCCAGAATCTCCTTCGGATAGGCCTGGCCTTTCTAGTCC < 41bp 0.554952191387263 0.892776930909768 0.31693122 0.82846594 prediction 0.675649479045009 Functional Gain - NCR1 ENSG00000189430 CDS Human protein_coding chr19:55424100 chr19:55424101 nonsynonymous SNV 0.030 0 22 hPsi_associated_SNPs_24736 0 0 0 0 1 exosome 0.43871923936358 0.438718592995106 0.65693188 0 hPsi_site_18460 iPseU_CNN:0.65693188;iRNA_PseU:0 18461 chr11 62655812 62655812 1 + G A LUAD 62655811 + 62655791 62655831 41 TATCATTCTTAGGGCCAGAGTGAAGACCCTGGCTCCCTCCT TATCATTCTTAGGGCCAGAGTAAAGACCCTGGCTCCCTCCT < 41bp 0.438647467640003 0.837824636620843 0.27596593 0.30709416 prediction 0.675649273241687 Functional Gain - SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655811 chr11:62655812 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_24737 0 0 1 0 1 Nucleus 0.438718592995102 0.438718593000509 0 0 hPsi_site_18461 iPseU_CNN:0;iRNA_PseU:0 18462 chr16 4383370 4383370 1 + C A rs145990457 4383369 + 4383349 4383389 41 CTTCCTGCTGAACTCCAAGTTCCCCGAGAAGGTGGAGGGAC CTTCCTGCTGAACTCCAAGTTACCCGAGAAGGTGGAGGGAC < 41bp 0.479989424128934 0.837819664561165 0.272992 0.34866053 prediction 0.67563932912233 Functional Gain - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4383369 chr16:4383370 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_24738 0 0 0 0 1 Endoplasmic reticulum 0.438718583363309 0.438718193646497 0 0 hPsi_site_18462 iPseU_CNN:0;iRNA_PseU:0 18463 chr10 74673095 74673095 1 + G A CESC 74673094 + 74673074 74673114 41 TTGTGCAAATCAAATGCCATTGAAGTGAACATCCCCAGGGA TTGTGCAAATCAAATGCCATTAAAGTGAACATCCCCAGGGA < 41bp 0.561286530482121 0.899102309693221 0.26104665 0.2862692 prediction 0.6756315584222 Functional Gain - OIT3 ENSG00000138315 CDS Human protein_coding chr10:74673094 chr10:74673095 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_24739 0 0 0 0 1 Cytosol 0.438663610108235 0.438718646104682 0 0 hPsi_site_18463 iPseU_CNN:0;iRNA_PseU:0 18464 chr16 2025393 2025393 1 + G A rs34396682 2025392 + 2025372 2025412 41 AGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGC AGAGGAGCCAGTGTCCCAGCTAGGTGTGAAGTCCCCAGGGC < 41bp 0.556958031282127 0.894770341156054 0.22798246 0.39929768 prediction 0.675624619747854 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2025392 chr16:2025393 synonymous SNV . 0 22 hPsi_associated_SNPs_24740 0 0 1 0 2 Nucleus 0.438690600100018 0.438708840408958 0 0 hPsi_site_18464 iPseU_CNN:0;iRNA_PseU:0 18465 chr7 143807311 143807311 1 + G A SKCM 143807310 + 143807290 143807330 41 CTTAGTCGGGCCTCTTTCCTTGATTCTGGTCTCCTACATGC CTTAGTCGGGCCTCTTTCCTTAATTCTGGTCTCCTACATGC < 41bp 0.538801101569405 0.876611147421255 0.20825684 0.388142 prediction 0.6756200917037 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807310 chr7:143807311 synonymous SNV . 0 22 hPsi_associated_SNPs_24741 0 0 0 0 0 unknown 0.438718581770601 0.438718593073919 0 0 hPsi_site_18465 iPseU_CNN:0;iRNA_PseU:0 18466 chr7 143807150 143807150 1 + G A SKCM 143807149 + 143807129 143807169 41 TTTGCCCTGTCCCTGGTACATGAAATTCTCCTTCTAAGGTT TTTGCCCTGTCCCTGGTACATAAAATTCTCCTTCTAAGGTT < 41bp 0.538995722889907 0.876804428679 0.26526296 0.33190137 prediction 0.675617411578185 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807149 chr7:143807150 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_24742 0 0 0 0 0 unknown 0.438718592995102 0.438714227152212 0 0 hPsi_site_18466 iPseU_CNN:0;iRNA_PseU:0 18467 chr12 4854641 4854641 1 + G A UCEC 4854640 + 4854620 4854660 41 CAGGAGGACCGCACTGTGATTGTGTCTCCTGTGTTTGACAA CAGGAGGACCGCACTGTGATTATGTCTCCTGTGTTTGACAA < 41bp 0.554627906446892 0.892432905250546 0.28074545 0.45664474 prediction 0.675609997607307 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4854640 chr12:4854641 nonsynonymous SNV 0.971 3 22 hPsi_associated_SNPs_24743 0 0 0 0 1 cytosol 0.438875894521318 0.438690143070688 0 0 hPsi_site_18467 iPseU_CNN:0;iRNA_PseU:0 18468 chr9 35450241 35450241 1 + G A UCEC 35450240 + 35450220 35450260 41 TGTAGAAATGTTTACTGTGGTGTACACTGTTACTCAGATCT TGTAGAAATGTTTACTGTGGTATACACTGTTACTCAGATCT < 41bp 0.491643490545148 0.837800481314858 0.2843446 0.489323 prediction 0.675600962629717 Functional Gain - ATP8B5P ENSG00000179766;ENSG00000244213 ncRNA_exonic Human other chr9:35450240 chr9:35450241 . . 0 22 hPsi_associated_SNPs_24744 0 0 0 1 0 unknown 0.438606769320327 0.438737088288175 0 0 hPsi_site_18468 iPseU_CNN:0;iRNA_PseU:0 18469 chr9 129377817 129377817 1 + C A rs141391682 129377816 + 129377796 129377836 41 ACCAGCTGCTACTTCCGGGATCGGAAACTGTACTGCAAACA ACCAGCTGCTACTTCCGGGATAGGAAACTGTACTGCAAACA < 41bp 0.480158485496256 0.837798220386798 0.58354616 0.38309208 prediction 0.675596440773595 Functional Gain - LMX1B ENSG00000136944 CDS Human protein_coding chr9:129377816 chr9:129377817 synonymous SNV . 0 22 hPsi_associated_SNPs_24745 0 0 0 0 1 Endoplasmic reticulum 0.438492678039325 0.438715544981129 0 0 hPsi_site_18469 iPseU_CNN:0;iRNA_PseU:0 18470 chr11 5906168 5906168 1 + G A COAD 5906167 + 5906147 5906187 41 ATTGTGGATGTGATCTTAATTGCCTCTTCCTATGTGCTTAT ATTGTGGATGTGATCTTAATTACCTCTTCCTATGTGCTTAT < 41bp 0.523413705322852 0.861210828590384 0.17535147 0.2485792 prediction 0.675594246535065 Functional Gain - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5906167 chr11:5906168 nonsynonymous SNV 0.033 1 22 hPsi_associated_SNPs_24746 0 0 0 0 0 unknown 0.43872887762541 0.438687054928312 0 0 hPsi_site_18470 iPseU_CNN:0;iRNA_PseU:0 18471 chr1 144014016 144014016 1 + G A rs587673002 144014015 + 144013995 144014035 41 AAAGAAGGCAGAGATTGAGATGGACTACTCCCGCAACCTGG AAAGAAGGCAGAGATTGAGATAGACTACTCCCGCAACCTGG < 41bp 0.532143465795625 0.869936225957315 0.23787403 0.45602077 prediction 0.67558552032338 Functional Gain - FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014015 chr1:144014016 . 0.999 0 22 hPsi_associated_SNPs_24747 0 0 1 0 1 unknown 0.438718627728413 0.438718589828205 0 0 hPsi_site_18471 iPseU_CNN:0;iRNA_PseU:0 18472 chr11 65746610 65746610 1 + G A rs546979464 65746609 + 65746589 65746629 41 TCCAGGGTTGGATCTTTGGTTGGGTGTGGCACAGAGTCTGG TCCAGGGTTGGATCTTTGGTTAGGTGTGGCACAGAGTCTGG < 41bp 0.522707850830904 0.860497133777933 0.25167602 0.84421885 prediction 0.67557856589406 Functional Gain - SART1 ENSG00000175467 UTR3 Human protein_coding chr11:65746609 chr11:65746610 . . 0 22 hPsi_associated_SNPs_24748 0 0 1 0 0 Cytosol 0.440449960709528 0.439531406616585 0.6884377 0 hPsi_site_18472 iPseU_CNN:0.6884377;iRNA_PseU:0 18473 chr9 131250217 131250217 1 + G A UCEC 131250216 + 131250196 131250236 41 ACAAACCCTGGAGGAGAAGATGCGGGAAGACCGGGATAGCC ACAAACCCTGGAGGAGAAGATACGGGAAGACCGGGATAGCC < 41bp 0.457582375096418 0.83778815035878 0.3002893 0.6682908 prediction 0.675576300717561 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131250216 chr9:131250217 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24749 0 0 1 0 2 Cytosol 0.438730419036246 0.438720032658332 0.3365816 0 hPsi_site_18473 iPseU_CNN:0.3365816;iRNA_PseU:0 18474 chr3 148744703 148744703 1 + G A LUAD 148744702 + 148744682 148744722 41 GACAACATCAAGAGGAAACTTGACACTTACCTCCAGTAGAA GACAACATCAAGAGGAAACTTAACACTTACCTCCAGTAGAA < 41bp 0.452346003777813 0.837785698404036 0.27936798 0.33612964 prediction 0.675571396808072 Functional Gain - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148744702 chr3:148744703 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24750 0 0 1 0 0 Cytosol 0.438784035670462 0.438707082720112 0 0 hPsi_site_18474 iPseU_CNN:0;iRNA_PseU:0 18475 chr9 140062241 140062241 1 + G A BLCA 140062240 + 140062220 140062260 41 TTGCAGCAGTACCATCCCACTGATATCACGGGCCCGCTCAA TTGCAGCAGTACCATCCCACTAATATCACGGGCCCGCTCAA < 41bp 0.5374204236685 0.875204083475777 0.19994274 0.2859456 prediction 0.675567319614555 Functional Gain - GRIN1 ENSG00000176884 CDS Human protein_coding chr9:140062240 chr9:140062241 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24751 0 0 0 0 1 exosome 0.43871884537705 0.438718754374372 0 0 hPsi_site_18475 iPseU_CNN:0;iRNA_PseU:0 18476 chr9 130263309 130263309 1 + G A UCEC 130263308 + 130263288 130263328 41 GAGCTGAAACCACCAATGGGTGAGGTCGTCACCCCTACGGC GAGCTGAAACCACCAATGGGTAAGGTCGTCACCCCTACGGC < 41bp 0.563076895151489 0.900857298096698 0.3091553 0.5226202 prediction 0.675560805890417 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130263308 chr9:130263309 nonsynonymous SNV 0.035 0 22 hPsi_associated_SNPs_24752 0 0 1 0 1 chromatin 0.438718592992532 0.438718592989242 0.0452404 0 hPsi_site_18476 iPseU_CNN:0.0452404;iRNA_PseU:0 18477 chr3 100368606 100368606 1 + C A LGG 100368605 + 100368585 100368625 41 CCAACGTTGGATGTGCACTGTCTGTTACTGGTCTGGCTCTC CCAACGTTGGATGTGCACTGTATGTTACTGGTCTGGCTCTC < 41bp 0.522845687313863 0.860618678812746 0.3241369 0.64535254 prediction 0.675545982997766 Functional Gain - ADGRG7 ENSG00000144820 CDS Human protein_coding chr3:100368605 chr3:100368606 nonsynonymous SNV 0.535 4 22 hPsi_associated_SNPs_24753 0 0 0 0 2 exosome 0.438294539172423 0.43871859364678 0.29070508 0 hPsi_site_18477 iPseU_CNN:0.29070508;iRNA_PseU:0 18478 chr19 42583295 42583295 1 + G A STAD 42583294 + 42583274 42583314 41 GGGCCAGGCCCGAGTGGCTGTGGAGCACTCATACCGAAAGG GGGCCAGGCCCGAGTGGCTGTAGAGCACTCATACCGAAAGG < 41bp 0.556827263838428 0.894592494320227 0.28072667 0.42728513 prediction 0.675530460963599 Functional Gain - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42583294 chr19:42583295 synonymous SNV . 0 22 hPsi_associated_SNPs_24754 0 0 1 0 0 Cytosol 0.438718592873714 0.438718594213851 0 0 hPsi_site_18478 iPseU_CNN:0;iRNA_PseU:0 18479 chr8 39781071 39781071 1 + G A SKCM 39781070 + 39781050 39781090 41 GTTGGAAATAGCTTCTTGCTTGGAGAAAGCCCTTCAAGTGT GTTGGAAATAGCTTCTTGCTTAGAGAAAGCCCTTCAAGTGT < 41bp 0.442481735492374 0.837762988031418 0.42882025 0.8714273 prediction 0.675525976062836 Functional Gain - IDO1 ENSG00000131203 CDS Human protein_coding chr8:39781070 chr8:39781071 synonymous SNV . 0 22 hPsi_associated_SNPs_24755 0 0 0 0 1 Cytosol 0.438725520444259 0.438709973746756 0.7428546 0 hPsi_site_18479 iPseU_CNN:0.7428546;iRNA_PseU:0 18480 chr18 76753464 76753464 1 + G A COAD 76753463 + 76753443 76753483 41 CCCCGAGTACCTGGACAACGTGCCCACCTGCTCGGGCATCC CCCCGAGTACCTGGACAACGTACCCACCTGCTCGGGCATCC < 41bp 0.555572871971423 0.89333286598491 0.2625383 0.6650774 prediction 0.675519988026973 Functional Gain - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76753463 chr18:76753464 synonymous SNV . 0 22 hPsi_associated_SNPs_24756 0 0 0 0 0 exosome 0.438699063980951 0.438716537182742 0.3301548 0 hPsi_site_18480 iPseU_CNN:0.3301548;iRNA_PseU:0 18481 chr8 55049988 55049988 1 + G A SKCM 55049987 + 55049967 55050007 41 GATTATGGTGTCCAGCTGGTTGAGGAGGTAAGTCTTGATTA GATTATGGTGTCCAGCTGGTTAAGGAGGTAAGTCTTGATTA < 41bp 0.442417602765988 0.837756231124361 0.16196775 0.5694256 prediction 0.675512462248722 Functional Gain - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55049987 chr8:55049988 nonsynonymous SNV 0.130 2 22 hPsi_associated_SNPs_24757 0 0 1 0 1 Cytosol 0.43867255737515 0.438769732190667 0.1388512 0 hPsi_site_18481 iPseU_CNN:0.1388512;iRNA_PseU:0 18482 chr7 34889232 34889232 1 + G A CESC 34889231 + 34889211 34889251 41 CGGGAGAGAACTGAGAGGCATGAGATGCAGATTCTGTCCAA CGGGAGAGAACTGAGAGGCATAAGATGCAGATTCTGTCCAA < 41bp 0.459132853242639 0.837753500106907 0.2826022 0.35522157 prediction 0.675507000213815 Functional Gain - NPSR1 ENSG00000187258 CDS Human protein_coding chr7:34889231 chr7:34889232 nonsynonymous SNV 0.703 0 22 hPsi_associated_SNPs_24758 0 0 0 0 1 Nucleus 0.438723094648459 0.438718608948461 0 0 hPsi_site_18482 iPseU_CNN:0;iRNA_PseU:0 18483 chrX 152225719 152225719 1 + C A UCEC 152225718 + 152225698 152225738 41 CGTAACTCAGATGGGGAATTTCTCAACAGACTGAACCGCTT CGTAACTCAGATGGGGAATTTATCAACAGACTGAACCGCTT < 41bp 0.494977205753997 0.837752875413731 0.4546751 0.45552582 prediction 0.675505750827462 Functional Gain - PNMA3 ENSG00000183837 CDS Human protein_coding chrX:152225718 chrX:152225719 nonsynonymous SNV 0.069 0 22 hPsi_associated_SNPs_24759 0 0 0 0 0 exosome 0.437383574498977 0.438718591941023 0 0 hPsi_site_18483 iPseU_CNN:0;iRNA_PseU:0 18484 chr16 89178577 89178577 1 + G A LAML 89178576 + 89178556 89178596 41 GCCTACAATATACACCAAGCTGATGGAGTACTACGACAGGC GCCTACAATATACACCAAGCTAATGGAGTACTACGACAGGC < 41bp 0.445237746037138 0.837751244770086 0.12958169 0.3797602 prediction 0.675502489540172 Functional Gain - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89178576 chr16:89178577 synonymous SNV . 0 22 hPsi_associated_SNPs_24760 0 0 1 0 2 chromatin 0.438900723837433 0.438719797283831 0 0 hPsi_site_18484 iPseU_CNN:0;iRNA_PseU:0 18485 chr22 39069240 39069240 1 + G A LUAD 39069239 + 39069219 39069259 41 GGATCAGCCGGAAGAGAAAATGAAGACCCCAGAGACATTTA GGATCAGCCGGAAGAGAAAATAAAGACCCCAGAGACATTTA < 41bp 0.540191663031804 0.877941519722966 0.2745046 0.42045465 prediction 0.675499713382323 Functional Gain - CBY1 ENSG00000100211 CDS Human protein_coding chr22:39069239 chr22:39069240 synonymous SNV . 0 22 hPsi_associated_SNPs_24761 0 0 1 0 1 Ribosome 0.438690432040783 0.438714218178291 0 0 hPsi_site_18485 iPseU_CNN:0;iRNA_PseU:0 18486 chr7 7646873 7646873 1 + G A rs114218720 7646872 + 7646852 7646892 41 AGATCAGCAGTTTTGATGTTTGAGTGATTTTGATATGCTTC AGATCAGCAGTTTTGATGTTTAAGTGATTTTGATATGCTTC < 41bp 0.488078750488796 0.837739630128849 0.27375668 0.7066164 prediction 0.675479260257698 Functional Gain - MIOS ENSG00000164654 UTR3 Human protein_coding chr7:7646872 chr7:7646873 . . 0 22 hPsi_associated_SNPs_24762 0 0 1 2 0 Nucleus 0.438194293552499 0.439713010431331 0.4132328 0 hPsi_site_18486 iPseU_CNN:0.4132328;iRNA_PseU:0 18487 chr4 103518768 103518768 1 + G A GBM 103518767 + 103518747 103518787 41 GACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATC GACAGGAGACGTGAAGATGCTACTGGCCGTCCAGCGCCATC < 41bp 0.417351888245626 0.837738742055628 0.24731314 0.6586437 prediction 0.675477484111257 Functional Gain - NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103518767 chr4:103518768 synonymous SNV . 0 22 hPsi_associated_SNPs_24763 0 0 1 0 2 Ribosome 0.438741141812657 0.438732927132069 0.3172874 0 hPsi_site_18487 iPseU_CNN:0.3172874;iRNA_PseU:0 18488 chr10 86007384 86007384 1 + C A UCEC 86007383 + 86007363 86007403 41 CCTCAATACCCTGACCATCTTCTCTTTCTGCAAGACCCCGG CCTCAATACCCTGACCATCTTATCTTTCTGCAAGACCCCGG < 41bp 0.477301737106991 0.837738359323867 0.24233812 0.4574326 prediction 0.675476718647733 Functional Gain - RGR ENSG00000148604 CDS Human protein_coding chr10:86007383 chr10:86007384 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24764 0 0 0 0 1 unknown 0.438718592995468 0.438718592995102 0 0 hPsi_site_18488 iPseU_CNN:0;iRNA_PseU:0 18489 chr5 112228452 112228452 1 + G A COAD 112228451 + 112228431 112228471 41 CTCCGAGAGGAGGGAGAAGATGGGCCACCACGACCACTACT CTCCGAGAGGAGGGAGAAGATAGGCCACCACGACCACTACT < 41bp 0.518594393780057 0.856329793399754 0.24482974 0.34759855 prediction 0.675470799239393 Functional Gain - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112228451 chr5:112228452 nonsynonymous SNV 0.052 0 22 hPsi_associated_SNPs_24765 0 0 1 0 0 Ribosome 0.438722965791792 0.438718592995152 0 0 hPsi_site_18489 iPseU_CNN:0;iRNA_PseU:0 18490 chr17 42982247 42982247 1 + G A UCEC 42982246 + 42982226 42982266 41 CTATTGCTGGAGGCAGGGTGTGCTAGTTGCTGGCTTCCGGC CTATTGCTGGAGGCAGGGTGTACTAGTTGCTGGCTTCCGGC < 41bp 0.447630953023045 0.837731892490629 0.2888766 0.5908065 prediction 0.675463784981257 Functional Gain - FAM187A ENSG00000214447 CDS Human protein_coding chr17:42982246 chr17:42982247 synonymous SNV . 0 22 hPsi_associated_SNPs_24766 0 0 0 0 0 exosome 0.438463781703026 0.437259888464865 0.181613 0 hPsi_site_18490 iPseU_CNN:0.181613;iRNA_PseU:0 18491 chr10 102296273 102296273 1 + G A STAD 102296272 + 102296252 102296292 41 GGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTT GGAGACTTCTCTGTGTACAGTACCAGCACCCACAAGTTCTT < 41bp 0.557185271652953 0.894914905919933 0.21190888 0.29483563 prediction 0.675459268533959 Functional Gain - HIF1AN ENSG00000166135 CDS Human protein_coding chr10:102296272 chr10:102296273 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24767 0 0 1 0 0 Ribosome 0.438567790186062 0.438672085614702 0 0 hPsi_site_18491 iPseU_CNN:0;iRNA_PseU:0 18492 chr11 69978061 69978061 1 + G A OV 69978060 + 69978040 69978080 41 CCAGAGACACAATATCACCATGTGCCCGCTTTGCGACAAGA CCAGAGACACAATATCACCATATGCCCGCTTTGCGACAAGA < 41bp 0.423490795819313 0.837725849959034 0.22592837 0.4466764 prediction 0.675451699918068 Functional Gain - ANO1 ENSG00000131620 CDS Human protein_coding chr11:69978060 chr11:69978061 nonsynonymous SNV 0.974 3 22 hPsi_associated_SNPs_24768 0 0 0 0 1 Cytosol 0.438718626855094 0.438709902347819 0 0 hPsi_site_18492 iPseU_CNN:0;iRNA_PseU:0 18493 chr5 137727182 137727182 1 + C A READ 137727181 + 137727161 137727201 41 ACCCCAGAGAATCATGAAAATCTATTTTTACAGCCCCCCAA ACCCCAGAGAATCATGAAAATATATTTTTACAGCCCCCCAA < 41bp 0.509629636159234 0.847346680709525 0.29976046 0.44057304 prediction 0.675434089100583 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137727181 chr5:137727182 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24769 0 0 1 0 0 Nucleus 0.438718572636498 0.438718592991616 0 0 hPsi_site_18493 iPseU_CNN:0;iRNA_PseU:0 18494 chr16 68387429 68387429 1 + G A LAML 68387428 + 68387408 68387448 41 TCCGGAGCCCCTGTGGTGACTGCGAAGGCTTCGACGTGCAC TCCGGAGCCCCTGTGGTGACTACGAAGGCTTCGACGTGCAC < 41bp 0.428580422152791 0.837716914468362 0.23384756 0.39133358 prediction 0.675433828936724 Functional Gain - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68387428 chr16:68387429 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_24770 0 0 1 0 2 Nucleus 0.438804928785486 0.423023165789308 0 0 hPsi_site_18494 iPseU_CNN:0;iRNA_PseU:0 18495 chr3 9485042 9485042 1 + G A UCEC 9485041 + 9485021 9485061 41 TCACCTGTGCATCTATGCTGTGTCTGCCATCACCAAGGATG TCACCTGTGCATCTATGCTGTATCTGCCATCACCAAGGATG < 41bp 0.424898278470008 0.837714886644778 0.459211 0.81227744 prediction 0.675429773289557 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9485041 chr3:9485042 synonymous SNV . 0 22 hPsi_associated_SNPs_24771 0 0 1 0 2 Nucleus 0.395140740235403 0.431361081179464 0.62455488 0 hPsi_site_18495 iPseU_CNN:0.62455488;iRNA_PseU:0 18496 chr18 43796124 43796124 1 + G A COAD 43796123 + 43796103 43796143 41 AGAGTGACTCCTCTAATCACTGCATGCTTTCCCCTTCCTCT AGAGTGACTCCTCTAATCACTACATGCTTTCCCCTTCCTCT < 41bp 0.44460275183815 0.83771042983168 0.3176887 0.4586069 prediction 0.67542085966336 Functional Gain - C18orf25 ENSG00000152242 CDS Human protein_coding chr18:43796123 chr18:43796124 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24772 0 0 1 0 0 Ribosome 0.438718267710628 0.438719853811221 0 0 hPsi_site_18496 iPseU_CNN:0;iRNA_PseU:0 18497 chr11 58391931 58391931 1 + C A CESC 58391930 + 58391910 58391950 41 TCCATGACCTTCGTTTCATTTCTTCTCATCAGACTGGGATC TCCATGACCTTCGTTTCATTTATTCTCATCAGACTGGGATC < 41bp 0.485204231308916 0.837707317194953 0.22209215 0.36052895 prediction 0.675414634389906 Functional Gain - CNTF ENSG00000242689 CDS Human protein_coding chr11:58391930 chr11:58391931 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24773 0 0 1 0 0 Cytosol 0.438709466722448 0.439845672491416 0 0 hPsi_site_18497 iPseU_CNN:0;iRNA_PseU:0 18498 chr15 59368264 59368264 1 + G A UCEC 59368263 + 59368243 59368283 41 CCTGTTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAGGC CCTGTTTCTTCCTCCCGAGCTACAATCTTTGGCCATCAGGC < 41bp 0.43137045855728 0.837705876243575 0.2833651 0.49283686 prediction 0.67541175248715 Functional Gain - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59368263 chr15:59368264 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24774 0 0 1 0 0 Ribosome 0.438718377604953 0.438720955197234 0 0 hPsi_site_18498 iPseU_CNN:0;iRNA_PseU:0 18499 chr22 29837884 29837884 1 + C T rs12484086 29837885 - 29837865 29837905 41 CCAGAAAAATCCCCACTCGCTGTAACTTGCGGTCTACGAAG CCAGAAAAATCCCCACTCGCTATAACTTGCGGTCTACGAAG < 41bp 0.464272089030679 0.837695877245016 0.23637876 0.25919098 prediction 0.675391754490032 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837885 chr22:29837884 stopgain 0.190 0 22 hPsi_associated_SNPs_24775 0 0 0 0 0 exosome 0.438718301174001 0.438718238891468 0 0 hPsi_site_18499 iPseU_CNN:0;iRNA_PseU:0 18500 chr17 61666638 61666638 1 + C A UCEC 61666637 + 61666617 61666657 41 TCCAGTGGCCAGTATGTCTTTCATTGCTTTGCACCCACTGT TCCAGTGGCCAGTATGTCTTTAATTGCTTTGCACCCACTGT < 41bp 0.512984196822229 0.850678763267333 0.21893239 0.31843656 prediction 0.675389132890207 Functional Gain - DCAF7 ENSG00000136485 CDS Human protein_coding chr17:61666637 chr17:61666638 stopgain . 0 22 hPsi_associated_SNPs_24776 0 0 1 0 0 Cytosol 0.438718587821658 0.438696802537273 0 0 hPsi_site_18500 iPseU_CNN:0;iRNA_PseU:0 18501 chr20 13782194 13782194 1 + C A rs117002283 13782193 + 13782173 13782213 41 AATGTTTGGAGGCGACACACTCTATGAACTTCGGTGTTCCT AATGTTTGGAGGCGACACACTATATGAACTTCGGTGTTCCT < 41bp 0.489366924398661 0.837689720137575 0.37529528 0.6809975 prediction 0.675379440275151 Functional Gain - NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13782193 chr20:13782194 synonymous SNV . 0 22 hPsi_associated_SNPs_24777 0 0 1 0 1 Ribosome 0.425838197712341 0.43876983026022 0.361995 0 hPsi_site_18501 iPseU_CNN:0.361995;iRNA_PseU:0 18502 chr21 43691232 43691232 1 + G A rs2229411 43691231 + 43691211 43691251 41 GAAGTTCAATAGTGGTGAGTTGGTGGCCATTATGGGTCCTT GAAGTTCAATAGTGGTGAGTTAGTGGCCATTATGGGTCCTT < 41bp 0.558801290546775 0.896489723503722 0.18094757 0.30356884 prediction 0.675376865913895 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43691231 chr21:43691232 synonymous SNV . 0 22 hPsi_associated_SNPs_24778 0 0 0 0 2 Cytosol 0.438723982865347 0.438717192536817 0 0 hPsi_site_18502 iPseU_CNN:0;iRNA_PseU:0 18503 chrX 101821457 101821457 1 + C A UCEC 101821456 + 101821436 101821476 41 CTTTCACAGGTATTACTTGATCTATGACTCTGAAGATCGAA CTTTCACAGGTATTACTTGATATATGACTCTGAAGATCGAA < 41bp 0.505148164654967 0.842832013982506 0.37591553 0.65755504 prediction 0.675367698655077 Functional Gain - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101821456 chrX:101821457 . . 0 22 hPsi_associated_SNPs_24779 0 0 0 2 2 unknown 0.438718604331327 0.438718597835819 0.31511008 0 hPsi_site_18503 iPseU_CNN:0.31511008;iRNA_PseU:0 18504 chr1 35227046 35227046 1 + G A UCEC 35227045 + 35227025 35227065 41 AGCCCGGCTGCCCCAACGTCTGCTATGACGAGTTCTTCCCC AGCCCGGCTGCCCCAACGTCTACTATGACGAGTTCTTCCCC < 41bp 0.430198540518166 0.837681350208605 0.27996927 0.3754311 prediction 0.675362700417211 Functional Gain - GJB4 ENSG00000189433 CDS Human protein_coding chr1:35227045 chr1:35227046 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_24780 0 0 0 0 0 exosome 0.438700055919645 0.438721215033446 0 0 hPsi_site_18504 iPseU_CNN:0;iRNA_PseU:0 18505 chr8 55049108 55049108 1 + G A BRCA 55049107 + 55049087 55049127 41 GTCGGAGAAGAGGTAGAAAATGTGGCAGAGGCCATAAAGGA GTCGGAGAAGAGGTAGAAAATATGGCAGAGGCCATAAAGGA < 41bp 0.558866817298496 0.896545011515815 0.33196336 0.34716758 prediction 0.675356388434638 Functional Gain - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55049107 chr8:55049108 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24781 0 0 1 0 1 Cytosol 0.438718565544027 0.438718592346338 0 0 hPsi_site_18505 iPseU_CNN:0;iRNA_PseU:0 18506 chr10 51582253 51582253 1 + G A KIRC 51582252 + 51582232 51582272 41 CCTTCCTGGAGAAGAGAGGCTGTATCTCCATGCCAGAGCAG CCTTCCTGGAGAAGAGAGGCTATATCTCCATGCCAGAGCAG < 41bp 0.441848798791484 0.837678031221873 0.2866785 0.4427787 prediction 0.675356062443746 Functional Gain - NCOA4 ENSG00000138293 CDS Human other chr10:51582252 chr10:51582253 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_24782 0 0 1 0 2 Cytosol 0.438726267457067 0.438752607567451 0 0 hPsi_site_18506 iPseU_CNN:0;iRNA_PseU:0 18507 chr18 12725487 12725487 1 + G A UCS 12725486 + 12725466 12725506 41 GGTGGAAAATACCAAGTTCTTGGAGATTACTCTTTGGCAGT GGTGGAAAATACCAAGTTCTTAGAGATTACTCTTTGGCAGT < 41bp 0.504542667792384 0.842215940657897 0.24720383 0.3163125 prediction 0.675346545731027 Functional Gain - PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12725486 chr18:12725487 stopgain 0.989 1 22 hPsi_associated_SNPs_24783 0 0 1 0 1 Ribosome 0.438718663290637 0.438767004538977 0 0 hPsi_site_18507 iPseU_CNN:0;iRNA_PseU:0 18508 chr2 119727772 119727772 1 + C A UCEC 119727771 + 119727751 119727791 41 GGCTGAGGACAGCCCGTCCTTCTCCTTGCTGCAGTCAGCAC GGCTGAGGACAGCCCGTCCTTATCCTTGCTGCAGTCAGCAC < 41bp 0.476347641614829 0.83767079243959 0.29951614 0.31485212 prediction 0.67534158487918 Functional Gain - MARCO ENSG00000019169 CDS Human protein_coding chr2:119727771 chr2:119727772 nonsynonymous SNV 0.079 1 22 hPsi_associated_SNPs_24784 0 0 0 0 1 exosome 0.438718661387174 0.438786883325025 0 0 hPsi_site_18508 iPseU_CNN:0;iRNA_PseU:0 18509 chr5 128302010 128302010 1 + C A COAD 128302009 + 128301989 128302029 41 GGTGACTGTGCTGGATAAATTCTTGAGTCATGCCAAAAGAC GGTGACTGTGCTGGATAAATTATTGAGTCATGCCAAAAGAC < 41bp 0.491102269050416 0.837667936389637 0.31736386 0.7055794 prediction 0.675335872779273 Functional Gain - SLC27A6 ENSG00000113396 CDS Human protein_coding chr5:128302009 chr5:128302010 nonsynonymous SNV 0.549 2 22 hPsi_associated_SNPs_24785 0 0 0 0 0 Endoplasmic reticulum 0.438718869561314 0.43867741070788 0.4111588 0 hPsi_site_18509 iPseU_CNN:0.4111588;iRNA_PseU:0 18510 chr17 48557062 48557062 1 + G A BLCA 48557061 + 48557041 48557081 41 CCTCGCCGCCTGGAGGAGGCTGCCATGCAGAAGTGTCTGGT CCTCGCCGCCTGGAGGAGGCTACCATGCAGAAGTGTCTGGT < 41bp 0.430345383325655 0.837667082735509 0.20152801 0.50216866 prediction 0.675334165471019 Functional Gain - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557061 chr17:48557062 nonsynonymous SNV 0.952 0 22 hPsi_associated_SNPs_24786 0 0 1 0 2 Ribosome 0.438718508125614 0.438718552190474 0.00433732000000009 0 hPsi_site_18510 iPseU_CNN:0.00433732000000009;iRNA_PseU:0 18511 chrY 15026499 15026499 1 + C A STAD 15026498 + 15026478 15026518 41 TCTGGGAAAACTGCAGCATTTCTTTTACCCATACTGAGTCA TCTGGGAAAACTGCAGCATTTATTTTACCCATACTGAGTCA < 41bp 0.520048367543573 0.857708269322682 0.60963106 0.47457013 prediction 0.675319803558219 Functional Gain - DDX3Y ENSG00000067048 CDS Human protein_coding chrY:15026498 chrY:15026499 nonsynonymous SNV 0.517 3 22 hPsi_associated_SNPs_24787 0 0 0 0 2 Nucleus 0.438718596176373 0.438728618425251 0 0 hPsi_site_18511 iPseU_CNN:0;iRNA_PseU:0 18512 chr7 150269650 150269650 1 + G A UCEC 150269649 + 150269629 150269669 41 TGACTTAGGTGACACCAATTTGCATGACTACTTAAGGGAAG TGACTTAGGTGACACCAATTTACATGACTACTTAAGGGAAG < 41bp 0.546507687365783 0.884166196026977 0.24229038 0.73219776 prediction 0.675317017322387 Functional Gain - GIMAP4 ENSG00000133574 CDS Human protein_coding chr7:150269649 chr7:150269650 synonymous SNV . 0 22 hPsi_associated_SNPs_24788 0 0 0 0 1 exosome 0.438718582405376 0.438718557651304 0.46439552 0 hPsi_site_18512 iPseU_CNN:0.46439552;iRNA_PseU:0 18513 chr20 62730025 62730025 1 + G A LUAD 62730024 + 62730004 62730044 41 TGGATGAGAACTTCAAGGCCTGCTTCCGCAAGTTCTGCTGT TGGATGAGAACTTCAAGGCCTACTTCCGCAAGTTCTGCTGT < 41bp 0.434130226159789 0.837654773022042 0.3185507 0.61709446 prediction 0.675309546044084 Functional Gain - OPRL1 ENSG00000125510 CDS Human protein_coding chr20:62730024 chr20:62730025 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_24789 0 0 0 0 0 exosome 0.438718593524148 0.438718591327371 0.23418892 0 hPsi_site_18513 iPseU_CNN:0.23418892;iRNA_PseU:0 18514 chr1 248263469 248263469 1 + C A LUSC 248263468 + 248263448 248263488 41 CTATCTTCGGCCCAGGAATCTCCGCTCACCAGCTGAAGACA CTATCTTCGGCCCAGGAATCTACGCTCACCAGCTGAAGACA < 41bp 0.50769132561946 0.845345249239649 0.26742873 0.34485245 prediction 0.675307847240379 Functional Gain - OR2L13 ENSG00000196071 CDS Human protein_coding chr1:248263468 chr1:248263469 synonymous SNV . 0 22 hPsi_associated_SNPs_24790 0 0 0 0 0 Nucleus 0.438718321132998 0.438719666066959 0 0 hPsi_site_18514 iPseU_CNN:0;iRNA_PseU:0 18515 chr19 41765880 41765880 1 + C A rs142554741 41765879 + 41765859 41765899 41 CACTGGGGAAAACTCCACCTTCCCACTTTCCCACCCCACGC CACTGGGGAAAACTCCACCTTACCACTTTCCCACCCCACGC < 41bp 0.520302425156452 0.857955568575823 0.20687976 0.31391987 prediction 0.675306286838741 Functional Gain - AXL ENSG00000167601 UTR3 Human protein_coding chr19:41765879 chr19:41765880 . . 0 22 hPsi_associated_SNPs_24791 0 0 1 0 0 Nucleus 0.43872046452202 0.438718637044325 0 0 hPsi_site_18515 iPseU_CNN:0;iRNA_PseU:0 18516 chr15 45560519 45560519 1 + C A LIHC 45560518 + 45560498 45560538 41 TTTGGCTGTGTTGGCCTTCATCAATGCTGCCCTCTCCTGGC TTTGGCTGTGTTGGCCTTCATAAATGCTGCCCTCTCCTGGC < 41bp 0.51396317050407 0.851615936040143 0.24817267 0.39085197 prediction 0.675305531072146 Functional Gain - SLC28A2 ENSG00000137860 CDS Human protein_coding chr15:45560518 chr15:45560519 synonymous SNV . 0 22 hPsi_associated_SNPs_24792 0 0 0 0 1 Nucleus 0.438718662359144 0.438718586461495 0 0 hPsi_site_18516 iPseU_CNN:0;iRNA_PseU:0 18517 chr14 31077173 31077173 1 + C A UCEC 31077172 + 31077152 31077192 41 CGGTGGTCCTTCACCTGGTTTCTTTTCTAAAACCTTGTTTA CGGTGGTCCTTCACCTGGTTTATTTTCTAAAACCTTGTTTA < 41bp 0.506866098894849 0.844517934699765 0.34756476 0.31387228 prediction 0.675303671609832 Functional Gain - G2E3 ENSG00000092140 CDS Human protein_coding chr14:31077172 chr14:31077173 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24793 0 0 0 0 1 Cytosol 0.438719440175178 0.438718638488241 0 0 hPsi_site_18517 iPseU_CNN:0;iRNA_PseU:0 18518 chr3 52518632 52518632 1 + G A READ 52518631 + 52518611 52518651 41 CCAGGGATGTTCTGATTCCTTGGAGTCCATCCCTGCGGGAC CCAGGGATGTTCTGATTCCTTAGAGTCCATCCCTGCGGGAC < 41bp 0.56277096907663 0.900420360870432 0.30475998 0.718485 prediction 0.675298783587605 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52518631 chr3:52518632 synonymous SNV . 0 22 hPsi_associated_SNPs_24794 0 0 1 0 1 Cytosol 0.438718592889618 0.438297301289548 0.43697 0 hPsi_site_18518 iPseU_CNN:0.43697;iRNA_PseU:0 18519 chr3 140401468 140401468 1 + G A LUSC 140401467 + 140401447 140401487 41 ACCACAGCCTGTGCGAGAAGTGCCTGCGGCAGCTGCAGAAG ACCACAGCCTGTGCGAGAAGTACCTGCGGCAGCTGCAGAAG < 41bp 0.424121136022844 0.837648942360391 0.1526734 0.30392802 prediction 0.675297884720782 Functional Gain - TRIM42 ENSG00000155890 CDS Human protein_coding chr3:140401467 chr3:140401468 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_24795 0 0 0 0 0 exosome 0.438569536733595 0.438180059649348 0 0 hPsi_site_18519 iPseU_CNN:0;iRNA_PseU:0 18520 chr4 83970347 83970347 1 + C A GBM 83970346 + 83970326 83970366 41 TGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCTGACTG TGAGAATGTCAGTCTCGTGATATCGCGGCAGTTGCTGACTG < 41bp 0.51395369330445 0.851600289696956 0.34496343 0.66704625 prediction 0.675293192785011 Functional Gain - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83970346 chr4:83970347 synonymous SNV . 0 22 hPsi_associated_SNPs_24796 0 0 1 0 1 Ribosome 0.439226908336364 0.438674057489452 0.3340925 0 hPsi_site_18520 iPseU_CNN:0.3340925;iRNA_PseU:0 18521 chr19 50155777 50155777 1 + G A BLCA 50155776 + 50155756 50155796 41 ACCATCACGGTGGGCCGGCTTGACAAGTCCGACCCCCGAGG ACCATCACGGTGGGCCGGCTTAACAAGTCCGACCCCCGAGG < 41bp 0.44791781011402 0.837645932888322 0.36063245 0.7562541 prediction 0.675291865776645 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155776 chr19:50155777 nonsynonymous SNV 0.762 1 22 hPsi_associated_SNPs_24797 0 0 1 0 0 Cytosol 0.438735443301782 0.438718741287319 0.5125082 0 hPsi_site_18521 iPseU_CNN:0.5125082;iRNA_PseU:0 18522 chr19 4311945 4311945 1 + G A BRCA 4311944 + 4311924 4311964 41 CAGCAAGATTGACCACTACGTGCTGGAGTACCGGCGGACCA CAGCAAGATTGACCACTACGTACTGGAGTACCGGCGGACCA < 41bp 0.433334348653785 0.837644346159291 0.42266196 0.93071747 prediction 0.675288692318581 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4311944 chr19:4311945 synonymous SNV . 0 22 hPsi_associated_SNPs_24798 0 0 0 0 0 cytosol 0.438671629213905 0.436916129104667 0.86143494 0 hPsi_site_18522 iPseU_CNN:0.86143494;iRNA_PseU:0 18523 chr7 158698692 158698692 1 + C A rs144444098 158698691 + 158698671 158698711 41 CTCACACAGATACAAACAGTTCCCCTTCCAGAGCCTCTGTT CTCACACAGATACAAACAGTTACCCTTCCAGAGCCTCTGTT < 41bp 0.487904755111953 0.837644134517458 0.23994452 0.68202275 prediction 0.675288269034916 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158698691 chr7:158698692 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_24799 0 0 0 0 2 Nucleus 0.438718593704419 0.438611117092904 0.3640455 0 hPsi_site_18523 iPseU_CNN:0.3640455;iRNA_PseU:0 18524 chr16 1705265 1705265 1 + C A GBM 1705264 + 1705244 1705284 41 GGTCTCCAGCCTCATCGAATTCTTGAAGCAGAAGTGGGCGC GGTCTCCAGCCTCATCGAATTATTGAAGCAGAAGTGGGCGC < 41bp 0.478647542476544 0.837639815968938 0.32888687 0.53254616 prediction 0.675279631937876 Functional Gain - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1705264 chr16:1705265 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_24800 0 0 1 0 2 chromatin 0.438625433107267 0.438710583907146 0.06509232 0 hPsi_site_18524 iPseU_CNN:0.06509232;iRNA_PseU:0 18525 chr2 99182579 99182579 1 + G A LGG 99182578 + 99182558 99182598 41 GAGTGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAACG GAGTGGCATGCTGCTGCGAGTACAGCCCGTCCTCTTCAACG < 41bp 0.556565571480648 0.894204072493192 0.4013192 0.63079965 prediction 0.675277002025088 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99182578 chr2:99182579 synonymous SNV . 0 22 hPsi_associated_SNPs_24801 0 0 1 0 2 Ribosome 0.438718631889721 0.438728429185897 0.2615993 0 hPsi_site_18525 iPseU_CNN:0.2615993;iRNA_PseU:0 18526 chr11 57982376 57982376 1 + G A KIRP 57982375 + 57982355 57982395 41 ATGTACCTGGTCACTGTGATTGGGAACGGGCTCATCATTGT ATGTACCTGGTCACTGTGATTAGGAACGGGCTCATCATTGT < 41bp 0.536399385393976 0.874036052420944 0.19181833 0.37613365 prediction 0.675273334053936 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57982375 chr11:57982376 nonsynonymous SNV 0.524 4 22 hPsi_associated_SNPs_24802 0 0 0 0 0 unknown 0.437130856844512 0.440140423064405 0 0 hPsi_site_18526 iPseU_CNN:0;iRNA_PseU:0 18527 chr14 52471094 52471094 1 + G A LUAD 52471093 + 52471073 52471113 41 AAAACAGATGCAGTTCTTAATGAAGCTGCTCAAATTCTGCG AAAACAGATGCAGTTCTTAATAAAGCTGCTCAAATTCTGCG < 41bp 0.446441872667478 0.837634625279082 0.2573234 0.28849393 prediction 0.675269250558163 Functional Gain - C14orf166 ENSG00000087302 CDS Human protein_coding chr14:52471093 chr14:52471094 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24803 0 0 1 0 1 Ribosome 0.439027368072384 0.438723808030749 0 0 hPsi_site_18527 iPseU_CNN:0;iRNA_PseU:0 18528 chr5 134332022 134332022 1 + G A COAD 134332021 + 134332001 134332041 41 GTTGTCCATGAAGGTCTATGTGGACCCCATCAACTACTGGA GTTGTCCATGAAGGTCTATGTAGACCCCATCAACTACTGGA < 41bp 0.427289403949827 0.837634264124701 0.24734733 0.45414722 prediction 0.675268528249402 Functional Gain - CATSPER3 ENSG00000152705 CDS Human protein_coding chr5:134332021 chr5:134332022 synonymous SNV . 0 22 hPsi_associated_SNPs_24804 0 0 0 0 1 cytosol 0.438720495330288 0.351169033123437 0 0 hPsi_site_18528 iPseU_CNN:0;iRNA_PseU:0 18529 chr14 96730958 96730958 1 + C A UCEC 96730957 + 96730937 96730977 41 CCTGAATCCAGTAATTTATGTCTTTGTGGGCCGGCTCTTCA CCTGAATCCAGTAATTTATGTATTTGTGGGCCGGCTCTTCA < 41bp 0.508070052080168 0.845700584441925 0.33180287 0.56586754 prediction 0.675261064723514 Functional Gain - BDKRB1 ENSG00000100739 CDS Human protein_coding chr14:96730957 chr14:96730958 synonymous SNV . 0 22 hPsi_associated_SNPs_24805 0 0 0 0 0 nucleus 0.438720995415529 0.438720385829405 0.13173508 0 hPsi_site_18529 iPseU_CNN:0.13173508;iRNA_PseU:0 18530 chr1 76228413 76228413 1 + G A COAD 76228412 + 76228392 76228432 41 TCACAAATTCAAAGACTTATTGTAGCCCGTGAACACATTGA TCACAAATTCAAAGACTTATTATAGCCCGTGAACACATTGA < 41bp 0.475156501547241 0.837629385637536 0.21641695 0.2643727 prediction 0.675258771275071 Functional Gain - ACADM ENSG00000117054 CDS Human protein_coding chr1:76228412 chr1:76228413 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_24806 0 0 1 0 1 Cytosol 0.438717972486192 0.438718719946592 0 0 hPsi_site_18530 iPseU_CNN:0;iRNA_PseU:0 18531 chr15 45047156 45047156 1 + C A COAD 45047155 + 45047135 45047175 41 ACTATGTTGAAATGAATGATTCAATCACCCACCTACCCTCT ACTATGTTGAAATGAATGATTAAATCACCCACCTACCCTCT < 41bp 0.496448570763205 0.837629366036323 0.326459 0.551915 prediction 0.675258732072646 Functional Gain - TRIM69 ENSG00000185880 CDS Human protein_coding chr15:45047155 chr15:45047156 stopgain 0.001 0 22 hPsi_associated_SNPs_24807 0 0 0 0 1 Ribosome 0.438718592994942 0.438718592995102 0.10383 0 hPsi_site_18531 iPseU_CNN:0.10383;iRNA_PseU:0 18532 chr11 65348684 65348684 1 + G A SARC 65348683 + 65348663 65348703 41 TCCCCCTCTTTCTTCTCAGTTGCCAGCCCTTCTAATGCTGA TCCCCCTCTTTCTTCTCAGTTACCAGCCCTTCTAATGCTGA < 41bp 0.437470462703248 0.837615938658248 0.33879426 0.7212 prediction 0.675231877316496 Functional Gain - EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65348683 chr11:65348684 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_24808 0 0 1 0 1 chromatin 0.438718608116248 0.43871858364442 0.4424 0 hPsi_site_18532 iPseU_CNN:0.4424;iRNA_PseU:0 18533 chr8 17486160 17486160 1 + G A GBM 17486159 + 17486139 17486179 41 CCAGCCAATGGAACGGACATTGTTTATGACATGAAGCGGGG CCAGCCAATGGAACGGACATTATTTATGACATGAAGCGGGG < 41bp 0.560193421691307 0.89780860469101 0.20679739 0.23743102 prediction 0.675230365999406 Functional Gain - PDGFRL ENSG00000104213 CDS Human protein_coding chr8:17486159 chr8:17486160 nonsynonymous SNV 0.185 0 22 hPsi_associated_SNPs_24809 0 0 0 0 0 exosome 0.438719907467692 0.438702987664235 0 0 hPsi_site_18533 iPseU_CNN:0;iRNA_PseU:0 18534 chr3 15079632 15079632 1 + C A COAD 15079631 + 15079611 15079651 41 GCATACCTTAAAGCTATAGTTCTCTTTAGCCCCGGTAAGAT GCATACCTTAAAGCTATAGTTATCTTTAGCCCCGGTAAGAT < 41bp 0.487352115339034 0.837609554952911 0.3450232 0.608086 prediction 0.675219109905823 Functional Gain - NR2C2 ENSG00000177463 CDS Human protein_coding chr3:15079631 chr3:15079632 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_24810 0 0 1 0 1 Cytosol 0.43871859558629 0.438718591501499 0.216172 0 hPsi_site_18534 iPseU_CNN:0.216172;iRNA_PseU:0 18535 chr11 64111800 64111800 1 + C A HNSC 64111799 + 64111779 64111819 41 CGGAGAAGGCTGGCCGTAGATCCTCTCTCCAGAGCCCTGCC CGGAGAAGGCTGGCCGTAGATACTCTCTCCAGAGCCCTGCC < 41bp 0.483938339046615 0.837607384284729 0.40934807 0.8238034 prediction 0.675214768569459 Functional Gain - CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64111799 chr11:64111800 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_24811 0 0 0 0 0 Ribosome 0.43872304478378 0.438719081735426 0.6476068 0 hPsi_site_18535 iPseU_CNN:0.6476068;iRNA_PseU:0 18536 chr11 11976654 11976654 1 + C A UCEC 11976653 + 11976633 11976673 41 TAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCT TAGACTGGAATCCTAAAGTTTATACCCTGAATGTCTGGCCT < 41bp 0.496083363485888 0.837606332879755 0.28444913 0.34634084 prediction 0.67521266575951 Functional Gain - USP47 ENSG00000170242 CDS Human protein_coding chr11:11976653 chr11:11976654 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24812 0 0 1 0 1 Nucleus 0.438724138467059 0.438718683459994 0 0 hPsi_site_18536 iPseU_CNN:0;iRNA_PseU:0 18537 chr22 40362110 40362110 1 + C A LUAD 40362109 + 40362089 40362129 41 TAGACTACTACAGGACAAATTCCATCTCCAGACAGAAGCAG TAGACTACTACAGGACAAATTACATCTCCAGACAGAAGCAG < 41bp 0.501996127030084 0.839600985556109 0.28110236 0.374283 prediction 0.675209717052049 Functional Gain - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40362109 chr22:40362110 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_24813 0 0 0 0 1 chromatin 0.438718859095073 0.438738060261477 0 0 hPsi_site_18537 iPseU_CNN:0;iRNA_PseU:0 18538 chr9 4834198 4834198 1 + G A PRAD 4834197 + 4834177 4834217 41 GAAGTGGTTTTCTCATGTCCTGTGAGGAAGGTCTTGAAGCC GAAGTGGTTTTCTCATGTCCTATGAGGAAGGTCTTGAAGCC < 41bp 0.557917554010409 0.895516692725024 0.2522726 0.3114403 prediction 0.675198277429231 Functional Gain - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4834197 chr9:4834198 nonsynonymous SNV 0.943 1 22 hPsi_associated_SNPs_24814 0 0 1 0 2 Cytosol 0.438712030499216 0.438702459594967 0 0 hPsi_site_18538 iPseU_CNN:0;iRNA_PseU:0 18539 chr20 57100453 57100453 1 + G A rs8118571 57100452 + 57100432 57100472 41 TGGTGGAAATGGGGTGAAGCTGTGGACTTTCTCTGGGTGCG TGGTGGAAATGGGGTGAAGCTATGGACTTTCTCTGGGTGCG < 41bp 0.517886920047291 0.855485857166484 0.62647825 0.49270323 prediction 0.675197874238384 Functional Gain - APCDD1L-AS1 ENSG00000231290 ncRNA_exonic Human processed_transcript chr20:57100452 chr20:57100453 . . 0 22 hPsi_associated_SNPs_24815 0 0 0 0 0 unknown 0.439320403428761 0.438753021910322 0 0 hPsi_site_18539 iPseU_CNN:0;iRNA_PseU:0 18540 chrX 10180628 10180628 1 + G A COAD 10180627 + 10180607 10180647 41 GGATCATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGT GGATCATCTTCAGGAACTGGTACAGACCCGGTGCAGACTGT < 41bp 0.425358158236738 0.837593351731533 0.5649972 0.88451874 prediction 0.675186703463065 Functional Gain - CLCN4 ENSG00000073464 CDS Human protein_coding chrX:10180627 chrX:10180628 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24816 0 0 0 0 1 Endoplasmic reticulum 0.438648050696582 0.438713369789099 0.63904308 0 hPsi_site_18540 iPseU_CNN:0.63904308;iRNA_PseU:0 18541 chr14 20586156 20586156 1 + G A GBM 20586155 + 20586135 20586175 41 GATACCATTTGCTGTGAACTTGCCCTTTTGTGGTCCCAATG GATACCATTTGCTGTGAACTTACCCTTTTGTGGTCCCAATG < 41bp 0.467483001072023 0.83758957268481 0.22696224 0.2705335 prediction 0.675179145369619 Functional Gain - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586155 chr14:20586156 synonymous SNV . 0 22 hPsi_associated_SNPs_24817 0 0 0 0 0 unknown 0.438718593277935 0.43871859585657 0 0 hPsi_site_18541 iPseU_CNN:0;iRNA_PseU:0 18542 chr17 41019397 41019397 1 + G A CESC 41019396 + 41019376 41019416 41 AGGTGAGAGGGAATGTAAGCTGAACCAGCTTCCCCATTGCC AGGTGAGAGGGAATGTAAGCTAAACCAGCTTCCCCATTGCC < 41bp 0.489831133911172 0.837586162045181 0.32441568 0.44840655 prediction 0.675172324090361 Functional Gain - AOC4P ENSG00000260105 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:41019396 chr17:41019397 . . 0 22 hPsi_associated_SNPs_24818 0 0 0 0 0 unknown 0.438717802828686 0.438714445257212 0 0 hPsi_site_18542 iPseU_CNN:0;iRNA_PseU:0 18543 chr10 105138217 105138217 1 + C A COAD 105138216 + 105138196 105138236 41 GGAGCACCTCTACATTGACATCTTTGATGGGATGCCGCGTA GGAGCACCTCTACATTGACATATTTGATGGGATGCCGCGTA < 41bp 0.522189922961933 0.85977313200927 0.6156999 0.5094302 prediction 0.675166418094674 Functional Gain - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105138216 chr10:105138217 synonymous SNV . 0 22 hPsi_associated_SNPs_24819 0 0 0 0 1 cytosol 0.438718592972415 0.438716940239554 0 0 hPsi_site_18543 iPseU_CNN:0;iRNA_PseU:0 18544 chr19 33588768 33588768 1 + C A GBM 33588767 + 33588747 33588787 41 CGAGGAGCCTGGAGACGGACTCTATGGCTGGACAGCACCCA CGAGGAGCCTGGAGACGGACTATATGGCTGGACAGCACCCA < 41bp 0.520113975577844 0.85769177723362 0.6424688 0.6420114 prediction 0.675155603311552 Functional Gain - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33588767 chr19:33588768 synonymous SNV . 0 22 hPsi_associated_SNPs_24820 0 0 1 0 1 Cytosol 0.438718593176119 0.438718661106163 0 0 hPsi_site_18544 iPseU_CNN:0;iRNA_PseU:0 18545 chr21 31768886 31768886 1 + G A BLCA 31768885 + 31768865 31768905 41 CTAGGAGCTGCCAGTCTTCTTGCTACAGACCAACTTGTGGA CTAGGAGCTGCCAGTCTTCTTACTACAGACCAACTTGTGGA < 41bp 0.531644487957911 0.869220247237436 0.22046876 0.55318564 prediction 0.675151518559051 Functional Gain - KRTAP13-1 ENSG00000198390 CDS Human protein_coding chr21:31768885 chr21:31768886 nonsynonymous SNV 0.980 1 22 hPsi_associated_SNPs_24821 0 0 0 0 0 unknown 0.438714482154969 0.438728948098364 0.10637128 0 hPsi_site_18545 iPseU_CNN:0.10637128;iRNA_PseU:0 18546 chr16 19278373 19278373 1 + C A UCEC 19278372 + 19278352 19278392 41 GAGCTGAGTGTGACCGCGTGTCTCCTGCCTCCCTGGAGGTG GAGCTGAGTGTGACCGCGTGTATCCTGCCTCCCTGGAGGTG < 41bp 0.522021848253831 0.859592339574451 0.27334872 0.53719926 prediction 0.675140982641239 Functional Gain - SYT17 ENSG00000103528 CDS Human protein_coding chr16:19278372 chr16:19278373 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_24822 0 0 0 0 0 exosome 0.43869364873355 0.438713600988442 0.0743985199999999 0 hPsi_site_18546 iPseU_CNN:0.0743985199999999;iRNA_PseU:0 18547 chr18 61597340 61597340 1 + G A SKCM 61597339 + 61597319 61597359 41 CACAACCAGGATGATTCTGGTGAACGCCCTATACTTTAAAG CACAACCAGGATGATTCTGGTAAACGCCCTATACTTTAAAG < 41bp 0.435196757826924 0.837570118618023 0.24240336 0.65047586 prediction 0.675140237236046 Functional Gain - SERPINB10 ENSG00000242550 CDS Human protein_coding chr18:61597339 chr18:61597340 synonymous SNV . 0 22 hPsi_associated_SNPs_24823 0 0 0 0 2 exosome 0.438718694049418 0.438718643250148 0.30095172 0 hPsi_site_18547 iPseU_CNN:0.30095172;iRNA_PseU:0 18548 chr14 38679002 38679002 1 + G A rs10130808 38679001 + 38678981 38679021 41 CTGCCGCCTCGTGCTCAGCGTGGACGCGGTCAACATGTTCA CTGCCGCCTCGTGCTCAGCGTAGACGCGGTCAACATGTTCA < 41bp 0.432485828848586 0.837566802384376 0.33055234 0.79576075 prediction 0.675133604768751 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38679001 chr14:38679002 synonymous SNV . 0 22 hPsi_associated_SNPs_24824 0 0 0 0 0 nucleus 0.438717154437322 0.438717934651422 0.5915215 0 hPsi_site_18548 iPseU_CNN:0.5915215;iRNA_PseU:0 18549 chrX 106844242 106844242 1 + G A SKCM 106844241 + 106844221 106844261 41 GAGAAGGCTGGAGGCCAGCATGGGGAGGCCAGAGGTTAGCA GAGAAGGCTGGAGGCCAGCATAGGGAGGCCAGAGGTTAGCA < 41bp 0.452807714665735 0.837565626043216 0.32163262 0.3953947 prediction 0.675131252086432 Functional Gain - FRMPD3 ENSG00000147234 CDS Human protein_coding chrX:106844241 chrX:106844242 nonsynonymous SNV 0.948 0 22 hPsi_associated_SNPs_24825 0 0 0 0 0 exosome 0.438718593787876 0.438718590694868 0 0 hPsi_site_18549 iPseU_CNN:0;iRNA_PseU:0 18550 chr2 74043640 74043640 1 + G A UCEC 74043639 + 74043619 74043659 41 ACTAACTCAGCTCAATCGAATGCAGTCAATCCATCCCGACC ACTAACTCAGCTCAATCGAATACAGTCAATCCATCCCGACC < 41bp 0.549176069976535 0.886738534328036 0.32677132 0.8025166 prediction 0.675124928703002 Functional Gain - C2orf78 ENSG00000187833 CDS Human protein_coding chr2:74043639 chr2:74043640 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_24826 0 0 0 0 0 unknown 0.438718317290266 0.438714168369297 0.6050332 0 hPsi_site_18550 iPseU_CNN:0.6050332;iRNA_PseU:0 18551 chrX 69699106 69699106 1 + G A GBM 69699105 + 69699085 69699125 41 AACAAGTGAAAAGAGGTCCTTGTATGTCAGGTAAGTTGCCC AACAAGTGAAAAGAGGTCCTTATATGTCAGGTAAGTTGCCC < 41bp 0.43035447087012 0.837562254555949 0.2777555 0.43791687 prediction 0.675124509111899 Functional Gain - DLG3 ENSG00000082458 CDS Human protein_coding chrX:69699105 chrX:69699106 synonymous SNV . 0 22 hPsi_associated_SNPs_24827 0 0 1 0 1 Ribosome 0.438718926612232 0.438718600013658 0 0 hPsi_site_18551 iPseU_CNN:0;iRNA_PseU:0 18552 chr1 207300168 207300168 1 + C A UCEC 207300167 + 207300147 207300187 41 AAGTGCCAAAAAGGTTTTGTTCTCAGAGGCAGCAGTGTAAT AAGTGCCAAAAAGGTTTTGTTATCAGAGGCAGCAGTGTAAT < 41bp 0.496114084391983 0.837560138055278 0.2951213 0.33866042 prediction 0.675120276110557 Functional Gain - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207300167 chr1:207300168 nonsynonymous SNV 0.016 2 22 hPsi_associated_SNPs_24828 0 0 0 0 1 Endoplasmic reticulum 0.438628195320049 0.438741665821412 0 0 hPsi_site_18552 iPseU_CNN:0;iRNA_PseU:0 18553 chr5 156729871 156729871 1 + C A UCEC 156729870 + 156729850 156729890 41 GTCGCAGAACCTTTCCATGTTCCTGGCCAACCACAACAGGA GTCGCAGAACCTTTCCATGTTACTGGCCAACCACAACAGGA < 41bp 0.518716915859526 0.856275770626121 0.36277407 0.61457276 prediction 0.675117709533189 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156729870 chr5:156729871 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24829 0 0 1 0 2 Cytosol 0.438342596669435 0.408707506767436 0.22914552 0 hPsi_site_18553 iPseU_CNN:0.22914552;iRNA_PseU:0 18554 chr3 114070718 114070718 1 + G A SKCM 114070717 + 114070697 114070737 41 CTCGGTCATCCCCTTGCAACTGATGTCACCTGCAGCATGTC CTCGGTCATCCCCTTGCAACTAATGTCACCTGCAGCATGTC < 41bp 0.467723445113238 0.837553171425097 0.23360056 0.32586902 prediction 0.675106342850194 Functional Gain - ZBTB20 ENSG00000181722 CDS Human protein_coding chr3:114070717 chr3:114070718 synonymous SNV . 0 22 hPsi_associated_SNPs_24830 0 0 0 2 1 Nucleus 0.435212719114534 0.438716583105985 0 0 hPsi_site_18554 iPseU_CNN:0;iRNA_PseU:0 18555 chr19 49184552 49184552 1 + G A rs76415555 49184551 + 49184531 49184571 41 TTCGCTTAGAGCCAGTGCCTTGTGACCGTGTGGGAGGTGTC TTCGCTTAGAGCCAGTGCCTTATGACCGTGTGGGAGGTGTC < 41bp 0.460823411976428 0.83754932111888 0.21309254 0.33085608 prediction 0.67509864223776 Functional Gain - SEC1P ENSG00000232871 downstream Human unitary_pseudogene chr19:49184551 chr19:49184552 . . 0 22 hPsi_associated_SNPs_24831 0 0 0 0 0 unknown 0.438804211528494 0.438725407384382 0 0 hPsi_site_18555 iPseU_CNN:0;iRNA_PseU:0 18556 chr14 24035776 24035776 1 + G A LGG 24035775 + 24035755 24035795 41 GCCAGAACCCTCTCACTTCTTGATGCTGTTGGTAATGAGCA GCCAGAACCCTCTCACTTCTTAATGCTGTTGGTAATGAGCA < 41bp 0.458097310143114 0.837545508738903 0.16636005 0.24446377 prediction 0.675091017477806 Functional Gain - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24035775 chr14:24035776 synonymous SNV . 0 22 hPsi_associated_SNPs_24832 0 0 1 0 0 Nucleus 0.439019566866989 0.438725741989973 0 0 hPsi_site_18556 iPseU_CNN:0;iRNA_PseU:0 18557 chr2 218954053 218954053 1 + C A UCEC 218954052 + 218954032 218954072 41 CTGTGTGGCCTGTAGCAAGATCTTTGGCCGATTTTCTCGGC CTGTGTGGCCTGTAGCAAGATATTTGGCCGATTTTCTCGGC < 41bp 0.525951880247868 0.863492998774858 0.819378 0.7201807 prediction 0.67508223705398 Functional Gain - RUFY4 ENSG00000188282 CDS Human protein_coding chr2:218954052 chr2:218954053 synonymous SNV . 0 22 hPsi_associated_SNPs_24833 0 0 0 0 2 exosome 0.438718592995102 0.438718592995098 0 0 hPsi_site_18557 iPseU_CNN:0;iRNA_PseU:0 18558 chr16 28898975 28898975 1 + C A BLCA 28898974 + 28898954 28898994 41 ACGACCCCGTCCATGGGGGCTCCTGGTTCCGCGGGGCCATC ACGACCCCGTCCATGGGGGCTACTGGTTCCGCGGGGCCATC < 41bp 0.524078629937125 0.861614372865893 0.12250137 0.49646127 prediction 0.675071485857536 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28898974 chr16:28898975 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_24834 0 0 0 0 1 chromatin 0.412808681332874 0.447139176220041 0 0 hPsi_site_18558 iPseU_CNN:0;iRNA_PseU:0 18559 chr4 155491638 155491638 1 + C A UCEC 155491637 + 155491617 155491657 41 GGATGGTGGTATAATAGATGTCATGCAGCCAATCCAAACGG GGATGGTGGTATAATAGATGTAATGCAGCCAATCCAAACGG < 41bp 0.514895147260802 0.852430548091346 0.22344372 0.59940445 prediction 0.675070801661088 Functional Gain - FGB ENSG00000171564 CDS Human protein_coding chr4:155491637 chr4:155491638 nonsynonymous SNV 0.975 4 22 hPsi_associated_SNPs_24835 0 0 1 0 1 Endoplasmic reticulum 0.438705588336978 0.438718411167691 0.1988089 0 hPsi_site_18559 iPseU_CNN:0.1988089;iRNA_PseU:0 18560 chr18 8784080 8784080 1 + G A rs75497676 8784079 + 8784059 8784099 41 CCGGGCTGGCTAGGAGAGGGTGCAAGTCCTGGTGCCGGGGG CCGGGCTGGCTAGGAGAGGGTACAAGTCCTGGTGCCGGGGG < 41bp 0.562631376341697 0.900166085953262 0.62124145 0.8721609 prediction 0.67506941922313 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8784079 chr18:8784080 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_24836 0 0 1 0 0 Nucleus 0.438718540122094 0.438718639305953 0.5018389 0 hPsi_site_18560 iPseU_CNN:0.5018389;iRNA_PseU:0 18561 chr5 42801040 42801040 1 + C T SKCM 42801041 - 42801021 42801061 41 CATTGTCGACATCTGATATTTGAAAAAACAGGGTCTGCAAT CATTGTCGACATCTGATATTTAAAAAAACAGGGTCTGCAAT < 41bp 0.537240565297264 0.874773306789363 0.2744816 0.5341213 prediction 0.675065482984198 Functional Gain - SELENOP ENSG00000250722 CDS Human protein_coding chr5:42801041 chr5:42801040 unknown 1.000 1 22 hPsi_associated_SNPs_24837 0 0 1 0 0 unknown 0.438898761123431 0.438718617982107 0.0682426 0 hPsi_site_18561 iPseU_CNN:0.0682426;iRNA_PseU:0 18562 chr7 142881334 142881334 1 + G A DLBC 142881333 + 142881313 142881353 41 CTCATTCTCTACATTTTCAATGCAGTTGCTCTGTTTATCTA CTCATTCTCTACATTTTCAATACAGTTGCTCTGTTTATCTA < 41bp 0.474976402299785 0.837517949283611 0.2616952 0.3775552 prediction 0.675035898567222 Functional Gain - TAS2R39 ENSG00000236398 CDS Human protein_coding chr7:142881333 chr7:142881334 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_24838 0 0 0 0 0 unknown 0.456191184524025 0.439187724181702 0 0 hPsi_site_18562 iPseU_CNN:0;iRNA_PseU:0 18563 chr16 56717110 56717110 1 + G A KIRC 56717109 + 56717089 56717129 41 CCTGTGCCGGCTCCTGCAAATGCAAAGAGTGCAAATGCACC CCTGTGCCGGCTCCTGCAAATACAAAGAGTGCAAATGCACC < 41bp 0.435520763715243 0.837513135175467 0.2748434 0.4428071 prediction 0.675026270350934 Functional Gain - MT1X ENSG00000187193 CDS Human protein_coding chr16:56717109 chr16:56717110 nonsynonymous SNV 0.040 3 22 hPsi_associated_SNPs_24839 0 0 1 2 1 Ribosome 0.438718593045083 0.438718593047237 0 0 hPsi_site_18563 iPseU_CNN:0;iRNA_PseU:0 18564 chr2 172333405 172333405 1 + C A UCEC 172333404 + 172333384 172333424 41 CTGAAATAGAAAATAATAGTTCTCAGCATCAGATCTCTGAA CTGAAATAGAAAATAATAGTTATCAGCATCAGATCTCTGAA < 41bp 0.499354898207643 0.837504780340762 0.2678134 0.34284008 prediction 0.675009560681524 Functional Gain - DCAF17 ENSG00000115827 CDS Human protein_coding chr2:172333404 chr2:172333405 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_24840 0 0 0 2 1 chromatin 0.435582052693849 0.438687979401059 0 0 hPsi_site_18564 iPseU_CNN:0;iRNA_PseU:0 18565 chr17 18145559 18145559 1 + G A LGG 18145558 + 18145538 18145578 41 CTGGCCCCACAGAGCCTTGATGGAAGCCCTGATCCAGCCCA CTGGCCCCACAGAGCCTTGATAGAAGCCCTGATCCAGCCCA < 41bp 0.444067883924371 0.837501205374351 0.21259037 0.3243913 prediction 0.675002410748703 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18145558 chr17:18145559 nonsynonymous SNV 0.123 0 22 hPsi_associated_SNPs_24841 0 0 1 0 2 Cytosol 0.438718592995102 0.438718680111003 0 0 hPsi_site_18565 iPseU_CNN:0;iRNA_PseU:0 18566 chr16 89703764 89703764 1 + G A UCEC 89703763 + 89703743 89703783 41 GTGCGCAAGCCGGCGCAACGTGCCTGACGACGTCCTGAGGC GTGCGCAAGCCGGCGCAACGTACCTGACGACGTCCTGAGGC < 41bp 0.556828492620044 0.894321781615482 0.26542807 0.6958557 prediction 0.674986577990877 Functional Gain - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89703763 chr16:89703764 synonymous SNV . 0 22 hPsi_associated_SNPs_24842 0 0 0 0 1 Ribosome 0.438614573497793 0.43770021961756 0.3917114 0 hPsi_site_18566 iPseU_CNN:0.3917114;iRNA_PseU:0 18567 chr1 17563878 17563878 1 + G A SARC 17563877 + 17563857 17563897 41 ACAGCAGGTGCAGGCACCCGTGGAGCTCTACTCGGACTGGC ACAGCAGGTGCAGGCACCCGTAGAGCTCTACTCGGACTGGC < 41bp 0.418211224004811 0.837489802224868 0.58032125 0.7220153 prediction 0.674979604449736 Functional Gain - PADI1 ENSG00000142623 CDS Human protein_coding chr1:17563877 chr1:17563878 synonymous SNV . 0 22 hPsi_associated_SNPs_24843 0 0 0 0 2 exosome 0.438711528781501 0.438718484251989 0.2833881 0 hPsi_site_18567 iPseU_CNN:0.2833881;iRNA_PseU:0 18568 chr2 233408046 233408046 1 + C A LUSC 233408045 + 233408025 233408065 41 GGCCCAGACTGTCTTCCTCTTCCTTGTGGCCAAGAAGGTGC GGCCCAGACTGTCTTCCTCTTACTTGTGGCCAAGAAGGTGC < 41bp 0.529720915103638 0.867209902807914 0.2766611 0.6191162 prediction 0.674977975408552 Functional Gain - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233408045 chr2:233408046 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24844 0 0 0 0 2 chromatin 0.438718593012178 0.438718595965589 0.2382324 0 hPsi_site_18568 iPseU_CNN:0.2382324;iRNA_PseU:0 18569 chr3 13977365 13977365 1 + G A rs12490233 13977364 + 13977344 13977384 41 AAGGAGGAGGAAGCCATGGATGACATGCTGACCAGCCTCTA AAGGAGGAGGAAGCCATGGATAACATGCTGACCAGCCTCTA < 41bp 0.481382192921505 0.83748166572677 0.2786647 0.30355838 prediction 0.67496333145354 Functional Gain - FGD5P1 ENSG00000250439 ncRNA_exonic Human other chr3:13977364 chr3:13977365 . . 0 22 hPsi_associated_SNPs_24845 0 0 0 0 0 unknown 0.438718593031149 0.438718606946077 0 0 hPsi_site_18569 iPseU_CNN:0;iRNA_PseU:0 18570 chr11 59211004 59211004 1 + G A HNSC 59211003 + 59210983 59211023 41 GTGCCTCCTCCTGACTGCTATGGCATACGACCGATATGCAG GTGCCTCCTCCTGACTGCTATAGCATACGACCGATATGCAG < 41bp 0.441410581525314 0.837481285071977 0.31676537 0.56969434 prediction 0.674962570143954 Functional Gain - OR5A1 ENSG00000172320 CDS Human protein_coding chr11:59211003 chr11:59211004 nonsynonymous SNV 0.184 4 22 hPsi_associated_SNPs_24846 0 0 0 0 0 unknown 0.438718534779439 0.438718373540023 0.13938868 0 hPsi_site_18570 iPseU_CNN:0.13938868;iRNA_PseU:0 18571 chr17 51900431 51900431 1 + C A UCEC 51900430 + 51900410 51900450 41 TGCCTCCCTGAATCCCCATGTCTCTCGCCCCTGAAACCCTT TGCCTCCCTGAATCCCCATGTATCTCGCCCCTGAAACCCTT < 41bp 0.495072379791279 0.837471602226461 0.25912386 0.39113635 prediction 0.674943204452922 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51900430 chr17:51900431 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_24847 0 0 0 0 0 exosome 0.438717087411021 0.438718593017876 0 0 hPsi_site_18571 iPseU_CNN:0;iRNA_PseU:0 18572 chr17 57344461 57344461 1 + C A UCEC 57344460 + 57344440 57344480 41 CCTGCTCATTCTTGGCCTTTTCTTCACTGGCCTCTTGCCCT CCTGCTCATTCTTGGCCTTTTATTCACTGGCCTCTTGCCCT < 41bp 0.515776147375696 0.853225558334115 0.35732472 0.49371246 prediction 0.674898821916838 Functional Gain - GDPD1 ENSG00000153982 CDS Human protein_coding chr17:57344460 chr17:57344461 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24848 0 0 0 0 2 chromatin 0.438883318108929 0.438705952063129 0 0 hPsi_site_18572 iPseU_CNN:0;iRNA_PseU:0 18573 chr17 68128424 68128424 1 + G A UCEC 68128423 + 68128403 68128443 41 GTTGACATCTTCACCACTCTTGTGGACACCAAGTGGCGCCA GTTGACATCTTCACCACTCTTATGGACACCAAGTGGCGCCA < 41bp 0.54631055811945 0.883758714218148 0.23896798 0.55707717 prediction 0.674896312197397 Functional Gain - KCNJ16 ENSG00000153822 CDS Human protein_coding chr17:68128423 chr17:68128424 nonsynonymous SNV 0.946 5 22 hPsi_associated_SNPs_24849 0 0 0 0 0 chromatin 0.438249137761898 0.43775204524051 0.11415434 0 hPsi_site_18573 iPseU_CNN:0.11415434;iRNA_PseU:0 18574 chr11 61502408 61502408 1 + C A LIHC 61502407 + 61502387 61502427 41 TGGCTGTAATGCCATTGCCATCCGGCGCCACTTCCTGGACG TGGCTGTAATGCCATTGCCATACGGCGCCACTTCCTGGACG < 41bp 0.528307747998715 0.865751756091181 0.30605775 0.50148195 prediction 0.674888016184932 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61502407 chr11:61502408 synonymous SNV . 0 22 hPsi_associated_SNPs_24850 0 0 0 0 2 Endoplasmic reticulum 0.438718621090653 0.438719000410646 0.00296389999999991 0 hPsi_site_18574 iPseU_CNN:0.00296389999999991;iRNA_PseU:0 18575 chr7 150439845 150439845 1 + G A SKCM 150439844 + 150439824 150439864 41 GCAGGCAGAGCTCCTGGCTGTGATTGAGAGGCTGGGGAGGG GCAGGCAGAGCTCCTGGCTGTAATTGAGAGGCTGGGGAGGG < 41bp 0.426297568129358 0.837443986186945 0.18463746 0.77527773 prediction 0.67488797237389 Functional Gain - GIMAP1-GIMAP5;GIMAP5 ENSG00000196329 CDS Human protein_coding chr7:150439844 chr7:150439845 synonymous SNV . 0 22 hPsi_associated_SNPs_24851 0 0 0 0 0 unknown 0.438718592995181 0.438718592996466 0.55055546 0 hPsi_site_18575 iPseU_CNN:0.55055546;iRNA_PseU:0 18576 chr1 156628454 156628454 1 + C A KIRP 156628453 + 156628433 156628473 41 GAAGGACTGGCCCAGCGCAATCTGCCGCTGATCCGATGCCA GAAGGACTGGCCCAGCGCAATATGCCGCTGATCCGATGCCA < 41bp 0.476917965813169 0.837438779681642 0.3318924 0.41165927 prediction 0.674877559363284 Functional Gain - BCAN ENSG00000132692 CDS Human protein_coding chr1:156628453 chr1:156628454 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24852 0 0 0 0 1 chromatin 0.438711714642098 0.438718141976389 0 0 hPsi_site_18576 iPseU_CNN:0;iRNA_PseU:0 18577 chr4 109088813 109088813 1 + G T UCEC 109088814 - 109088794 109088834 41 CGATCCTCAGAAGGAAAAGATCTTCGCCGAGATCAGTCATC CGATCCTCAGAAGGAAAAGATATTCGCCGAGATCAGTCATC < 41bp 0.504680897452252 0.842117796528485 0.7293073 0.8672607 prediction 0.674873798152464 Functional Gain - LEF1 ENSG00000138795 CDS Human protein_coding chr4:109088814 chr4:109088813 synonymous SNV . 0 22 hPsi_associated_SNPs_24853 0 0 0 0 0 Cytosol 0.438652742688127 0.438710129316487 0.2759068 0 hPsi_site_18577 iPseU_CNN:0.2759068;iRNA_PseU:0 18578 chr10 68688159 68688159 1 + G A BLCA 68688158 + 68688138 68688178 41 GGAGACCAGCGAGATGCTGCTGAATGGGACGGGACCCTGCA GGAGACCAGCGAGATGCTGCTAAATGGGACGGGACCCTGCA < 41bp 0.456378065534396 0.837435448989972 0.22848916 0.27732086 prediction 0.674870897979944 Functional Gain - LRRTM3 ENSG00000198739 CDS Human protein_coding chr10:68688158 chr10:68688159 synonymous SNV . 0 22 hPsi_associated_SNPs_24854 0 0 0 0 1 unknown 0.438704559322234 0.438744651753784 0 0 hPsi_site_18578 iPseU_CNN:0;iRNA_PseU:0 18579 chr1 161561154 161561154 1 + G A rs201842559 161561153 + 161561133 161561173 41 AGGAAACATAGGCTACACGCTGTACTCATCCAAGCCTGTGA AGGAAACATAGGCTACACGCTATACTCATCCAAGCCTGTGA < 41bp 0.458708225106427 0.83743499734436 0.675478 0.91986585 prediction 0.67486999468872 Functional Gain - FCGR2C ENSG00000244682 CDS Human polymorphic_pseudogene chr1:161561153 chr1:161561154 unknown . 0 22 hPsi_associated_SNPs_24855 0 0 0 0 0 unknown 0.438676571764295 0.438690419973134 0.4887757 0 hPsi_site_18579 iPseU_CNN:0.4887757;iRNA_PseU:0 18580 chr11 74547470 74547470 1 + G A LUAD 74547469 + 74547449 74547489 41 CTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCC CTGACTAATGGTGTTCTAGTTAAGAGCCTAAGTGAAGAGCC < 41bp 0.532841047263938 0.87027590193092 0.32672387 0.7992537 prediction 0.674869709333965 Functional Gain - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74547469 chr11:74547470 nonsynonymous SNV 0.129 1 22 hPsi_associated_SNPs_24856 0 0 1 0 0 Nucleus 0.43871926793224 0.4387367561295 0.5985074 0 hPsi_site_18580 iPseU_CNN:0.5985074;iRNA_PseU:0 18581 chr12 130648429 130648429 1 + G A rs140865835 130648428 + 130648408 130648448 41 CGGCTGCACGCTGGTCTTCCTGGTCCTCTACTACTTCGGCA CGGCTGCACGCTGGTCTTCCTAGTCCTCTACTACTTCGGCA < 41bp 0.439793489106347 0.83743267415413 0.1475893 0.30802146 prediction 0.674865348308259 Functional Gain - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130648428 chr12:130648429 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_24857 0 0 0 0 0 exosome 0.438718149436466 0.438718426649656 0 0 hPsi_site_18581 iPseU_CNN:0;iRNA_PseU:0 18582 chr11 55606278 55606278 1 + G A SKCM 55606277 + 55606257 55606297 41 TGAGGCCACATTCACTCTCTTGGGCTTCTCAGATTACCTGG TGAGGCCACATTCACTCTCTTAGGCTTCTCAGATTACCTGG < 41bp 0.524286683131447 0.861718673791 0.18605718 0.24970657 prediction 0.674863981319107 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606277 chr11:55606278 synonymous SNV . 0 22 hPsi_associated_SNPs_24858 0 0 0 0 0 unknown 0.438718398575093 0.439601748497348 0 0 hPsi_site_18582 iPseU_CNN:0;iRNA_PseU:0 18583 chr1 12837231 12837231 1 + G A OV 12837230 + 12837210 12837250 41 CGGACCTGAAGCATCTCTCTTGGTGCCCGAGCATCCGTCAG CGGACCTGAAGCATCTCTCTTAGTGCCCGAGCATCCGTCAG < 41bp 0.440854824358263 0.83741413704168 0.22366264 0.35717928 prediction 0.67482827408336 Functional Gain - PRAMEF12 ENSG00000116726 CDS Human protein_coding chr1:12837230 chr1:12837231 stopgain 0.000 0 22 hPsi_associated_SNPs_24859 0 0 0 0 1 unknown 0.438718591891749 0.438719137731627 0 0 hPsi_site_18583 iPseU_CNN:0;iRNA_PseU:0 18584 chr11 56019909 56019909 1 + G A SKCM 56019908 + 56019888 56019928 41 CAATTTAGGGCTGGTTGTGTTGGTCATTGAGGATTCCTGGC CAATTTAGGGCTGGTTGTGTTAGTCATTGAGGATTCCTGGC < 41bp 0.462894138588253 0.837412427036747 0.2828998 0.6350242 prediction 0.674824854073494 Functional Gain - OR5T3 ENSG00000172489 CDS Human protein_coding chr11:56019908 chr11:56019909 synonymous SNV . 0 22 hPsi_associated_SNPs_24860 0 0 0 0 0 unknown 0.438718592994552 0.438718644358936 0.2700484 0 hPsi_site_18584 iPseU_CNN:0.2700484;iRNA_PseU:0 18585 chr1 55050453 55050453 1 + G A rs114153052 55050452 + 55050432 55050472 41 GGTGCAGATGAGCCAGCTGGTGCTGCCCTGCCACACCAACC GGTGCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACC < 41bp 0.566997069922841 0.904407740731646 0.2610042 0.770959 prediction 0.674821341617609 Functional Gain - ACOT11 ENSG00000162390 CDS Human protein_coding chr1:55050452 chr1:55050453 synonymous SNV . 0 22 hPsi_associated_SNPs_24861 0 0 0 0 1 chromatin 0.438718592986113 0.438718482572397 0.541918 0 hPsi_site_18585 iPseU_CNN:0.541918;iRNA_PseU:0 18586 chr11 47182833 47182833 1 + G A rs3740695 47182832 + 47182812 47182852 41 TGGGGCCAACACCACTTGTCTGTAACATCCCACATCTGCCA TGGGGCCAACACCACTTGTCTATAACATCCCACATCTGCCA < 41bp 0.473937413964844 0.837408243729513 0.329155 0.6072941 prediction 0.674816487459025 Functional Gain - C11orf49 ENSG00000149179 UTR3 Human protein_coding chr11:47182832 chr11:47182833 . . 0 22 hPsi_associated_SNPs_24862 0 0 0 1 0 chromatin 0.441881201562195 0.446389767938145 0.2145882 0 hPsi_site_18586 iPseU_CNN:0.2145882;iRNA_PseU:0 18587 chr5 176733449 176733449 1 + G T CESC 176733450 - 176733430 176733470 41 CCTTGGCTTCCTTGGCTGTCTCAACAAGTGTTTTGGAAGGG CCTTGGCTTCCTTGGCTGTCTAAACAAGTGTTTTGGAAGGG < 41bp 0.492797259239607 0.837403247888894 0.3213343 0.34721166 prediction 0.674806495777788 Functional Gain - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176733450 chr5:176733449 stopgain 1.000 1 22 hPsi_associated_SNPs_24863 0 0 0 0 0 Cytosol 0.438593933369969 0.438668652342603 0 0 hPsi_site_18587 iPseU_CNN:0;iRNA_PseU:0 18588 chr2 31484465 31484465 1 + C A SARC 31484464 + 31484444 31484484 41 GAAGGAGATGCCCTCGGTGTTCGGGAAGGACAACAAGAAGA GAAGGAGATGCCCTCGGTGTTAGGGAAGGACAACAAGAAGA < 41bp 0.523065788271968 0.860462428472161 0.18469805 0.23934436 prediction 0.674793280400386 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31484464 chr2:31484465 nonsynonymous SNV 0.962 2 22 hPsi_associated_SNPs_24864 0 0 0 0 1 exosome 0.438718593289389 0.438745593468494 0 0 hPsi_site_18588 iPseU_CNN:0;iRNA_PseU:0 18589 chr12 64199056 64199056 1 + G A COAD 64199055 + 64199035 64199075 41 GGAGGCAAGTTGGTCAATGCTGCATGATGAGAGGCCATATT GGAGGCAAGTTGGTCAATGCTACATGATGAGAGGCCATATT < 41bp 0.460440822487564 0.837394953502833 0.31976366 0.4776506 prediction 0.674789907005666 Functional Gain - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64199055 chr12:64199056 synonymous SNV . 0 22 hPsi_associated_SNPs_24865 0 0 0 0 1 Endoplasmic reticulum 0.439098106260612 0.438481530193339 0 0 hPsi_site_18589 iPseU_CNN:0;iRNA_PseU:0 18590 chr4 57193817 57193817 1 + C A LUAD 57193816 + 57193796 57193836 41 AAAACAAAATCCAGTGGAGATCTCCGACTCGGCTCCCCCAG AAAACAAAATCCAGTGGAGATATCCGACTCGGCTCCCCCAG < 41bp 0.504307463922666 0.841697114443096 0.3133207 0.710052 prediction 0.67477930104086 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57193816 chr4:57193817 synonymous SNV . 0 22 hPsi_associated_SNPs_24866 0 0 0 0 1 cytosol 0.438718592991374 0.438718593001378 0.420104 0 hPsi_site_18590 iPseU_CNN:0.420104;iRNA_PseU:0 18591 chr12 81112732 81112732 1 + C A LUAD 81112731 + 81112711 81112751 41 TCAGAGCAACCTGGGTTGCCTCTCCAGGATCTGGCTTCTCT TCAGAGCAACCTGGGTTGCCTATCCAGGATCTGGCTTCTCT < 41bp 0.494155722753383 0.837384469650402 0.2637956 0.30505937 prediction 0.674768939300805 Functional Gain - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81112731 chr12:81112732 nonsynonymous SNV 0.779 1 22 hPsi_associated_SNPs_24867 0 0 0 0 1 unknown 0.438718915231992 0.438715311286247 0 0 hPsi_site_18591 iPseU_CNN:0;iRNA_PseU:0 18592 chr1 120283058 120283058 1 + G A HNSC 120283057 + 120283037 120283077 41 TCTCTCCACACACCAAGCCTTGGATTGGTCTGGCAGAAGCT TCTCTCCACACACCAAGCCTTAGATTGGTCTGGCAGAAGCT < 41bp 0.423846343850212 0.837382876847608 0.2994578 0.47761732 prediction 0.674765753695217 Functional Gain - PHGDH ENSG00000092621 CDS Human protein_coding chr1:120283057 chr1:120283058 stopgain 1.000 1 22 hPsi_associated_SNPs_24868 0 0 1 0 1 Ribosome 0.438718514693498 0.438718607930127 0 0 hPsi_site_18592 iPseU_CNN:0;iRNA_PseU:0 18593 chr11 5443808 5443808 1 + G A COAD 5443807 + 5443787 5443827 41 TATGTCCGTTGACTGCTATGTGGCCATCTGCTGTCCCCTCC TATGTCCGTTGACTGCTATGTAGCCATCTGCTGTCCCCTCC < 41bp 0.444426992332766 0.837377344021207 0.20337743 0.39743125 prediction 0.674754688042414 Functional Gain - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5443807 chr11:5443808 synonymous SNV . 0 22 hPsi_associated_SNPs_24869 0 0 0 0 0 chromatin 0.438719750885679 0.438705300234706 0 0 hPsi_site_18593 iPseU_CNN:0;iRNA_PseU:0 18594 chr1 25780777 25780777 1 + C A UCEC 25780776 + 25780756 25780796 41 GAGTGTGTTTGCCTACAGTGTCTCTCTGGATCCTCTTTGTT GAGTGTGTTTGCCTACAGTGTATCTCTGGATCCTCTTTGTT < 41bp 0.481371659545783 0.837375674608718 0.36486626 0.6941392 prediction 0.674751349217436 Functional Gain - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25780776 chr1:25780777 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_24870 0 0 1 2 2 Ribosome 0.438718592729302 0.438783483636595 0.3882784 0 hPsi_site_18594 iPseU_CNN:0.3882784;iRNA_PseU:0 18595 chr1 161722226 161722226 1 + G A SKCM 161722225 + 161722205 161722245 41 GTTTCACAAGGATTGAAAGATGAGGTTCTCTACAAGTGTAG GTTTCACAAGGATTGAAAGATAAGGTTCTCTACAAGTGTAG < 41bp 0.446187660882514 0.837373270818193 0.2867503 0.37533298 prediction 0.674746541636386 Functional Gain - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161722225 chr1:161722226 nonsynonymous SNV 0.888 0 22 hPsi_associated_SNPs_24871 0 0 1 0 2 Ribosome 0.43828866115616 0.439298499552804 0 0 hPsi_site_18595 iPseU_CNN:0;iRNA_PseU:0 18596 chr19 38817398 38817398 1 + G A LUSC 38817397 + 38817377 38817417 41 GGCTGAGCATGCGTTGGGGCTGGGACCCCCGGCGGGCGGCC GGCTGAGCATGCGTTGGGGCTAGGACCCCCGGCGGGCGGCC < 41bp 0.564870071113592 0.902232907520998 0.18658444 0.2822268 prediction 0.674725672814812 Functional Gain - KCNK6 ENSG00000099337 CDS Human protein_coding chr19:38817397 chr19:38817398 stopgain 0.754 0 22 hPsi_associated_SNPs_24872 0 0 0 0 0 Ribosome 0.438718599888175 0.438712728114165 0 0 hPsi_site_18596 iPseU_CNN:0;iRNA_PseU:0 18597 chr3 51746960 51746960 1 + G A BLCA 51746959 + 51746939 51746979 41 GAGAGTGTGGTGGCAGGCAGTGAGGGGGCTGCTGAGGGTGC GAGAGTGTGGTGGCAGGCAGTAAGGGGGCTGCTGAGGGTGC < 41bp 0.436933282249739 0.837346322918081 0.24195302 0.5582392 prediction 0.674692645836162 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51746959 chr3:51746960 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_24873 0 0 0 0 0 Endoplasmic reticulum 0.438720826877289 0.439622787390362 0.1164784 0 hPsi_site_18597 iPseU_CNN:0.1164784;iRNA_PseU:0 18598 chr5 126161789 126161789 1 + C A COAD 126161788 + 126161768 126161808 41 TGAAGGTTATATTGAAAAATTCTCAGGGAGAGGTATGGCCA TGAAGGTTATATTGAAAAATTATCAGGGAGAGGTATGGCCA < 41bp 0.510729805709311 0.848068446792356 0.34952042 0.37276882 prediction 0.67467728216609 Functional Gain - LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126161788 chr5:126161789 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24874 0 0 1 2 1 Ribosome 0.438310510426514 0.438719235845417 0 0 hPsi_site_18598 iPseU_CNN:0;iRNA_PseU:0 18599 chr4 2936685 2936685 1 + G A rs369490913 2936684 + 2936664 2936704 41 CCTGCGGGTCGCTGCTTGGCTGTGGGTTAGCAGCACCCTGA CCTGCGGGTCGCTGCTTGGCTATGGGTTAGCAGCACCCTGA < 41bp 0.480189556964432 0.837336369805692 0.1377115 0.4379507 prediction 0.674672739611384 Functional Gain - MFSD10;NOP14-AS1 ENSG00000249673 ncRNA_exonic Human antisense chr4:2936684 chr4:2936685 . . 0 22 hPsi_associated_SNPs_24875 0 0 1 0 0 unknown 0.438718307909713 0.438726111029168 0 0 hPsi_site_18599 iPseU_CNN:0;iRNA_PseU:0 18600 chr6 170169757 170169757 1 + C A UCEC 170169756 + 170169736 170169776 41 CTAATCAGTTGCTTGCATTTTCTCTTGTACTGCTACTCAGA CTAATCAGTTGCTTGCATTTTATCTTGTACTGCTACTCAGA < 41bp 0.489394826034881 0.837332230852696 0.28774214 0.2427088 prediction 0.674664461705392 Functional Gain - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170169756 chr6:170169757 nonsynonymous SNV 0.045 3 22 hPsi_associated_SNPs_24876 0 0 0 0 1 chromatin 0.4389306149744 0.439710253912565 0 0 hPsi_site_18600 iPseU_CNN:0;iRNA_PseU:0 18601 chr20 57429151 57429151 1 + C A LUAD 57429150 + 57429130 57429170 41 GAACGCGCCTCCCCTCTGGGTCCCAGGCGCCATCGGCAGCC GAACGCGCCTCCCCTCTGGGTACCAGGCGCCATCGGCAGCC < 41bp 0.488572941630071 0.837322779902918 0.17135629 0.548055 prediction 0.674645559805837 Functional Gain - GNAS ENSG00000087460 CDS Human protein_coding chr20:57429150 chr20:57429151 nonsynonymous SNV 0.493 1 22 hPsi_associated_SNPs_24877 0 0 0 0 0 Cytosol 0.438728674763291 0.438741446519674 0.0961099999999999 0 hPsi_site_18601 iPseU_CNN:0.0961099999999999;iRNA_PseU:0 18602 chr5 140559320 140559320 1 + G A rs17844498 140559319 + 140559299 140559339 41 GTGCTGTACCCGCTGCAGAATGGCTCCGCGCCCTGCACCGA GTGCTGTACCCGCTGCAGAATAGCTCCGCGCCCTGCACCGA < 41bp 0.442137257457611 0.83732158790526 0.20538399 0.38147908 prediction 0.674643175810519 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140559319 chr5:140559320 nonsynonymous SNV 0.020 0 22 hPsi_associated_SNPs_24878 0 0 0 0 0 exosome 0.438718591385133 0.43871859260215 0 0 hPsi_site_18602 iPseU_CNN:0;iRNA_PseU:0 18603 chr14 20215832 20215832 1 + G A UCEC 20215831 + 20215811 20215851 41 CTGTGTTACTGTGCCAAAGATGTTAGGGGATTTCCTACAGC CTGTGTTACTGTGCCAAAGATATTAGGGGATTTCCTACAGC < 41bp 0.534356949755465 0.871676306007583 0.25706172 0.33860046 prediction 0.674638712504236 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20215831 chr14:20215832 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24879 0 0 0 0 0 unknown 0.438719884010983 0.438718598140978 0 0 hPsi_site_18603 iPseU_CNN:0;iRNA_PseU:0 18604 chr17 78078818 78078818 1 + G A SKCM 78078817 + 78078797 78078837 41 CTGGAGAACCTGAGCTCCTCTGAAATGGGCTACACGGCCAC CTGGAGAACCTGAGCTCCTCTAAAATGGGCTACACGGCCAC < 41bp 0.43669099758163 0.837319223898503 0.23287314 0.2674761 prediction 0.674638447797006 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78078817 chr17:78078818 nonsynonymous SNV 0.372 1 22 hPsi_associated_SNPs_24880 0 0 1 0 0 Endoplasmic reticulum 0.438718594537482 0.438718592995103 0 0 hPsi_site_18604 iPseU_CNN:0;iRNA_PseU:0 18605 chr19 50990086 50990086 1 + G A rs45553332 50990085 + 50990065 50990105 41 AGTTTGCTGAGCATGATGTTTGTATATTGATTAGGAGTAAA AGTTTGCTGAGCATGATGTTTATATATTGATTAGGAGTAAA < 41bp 0.497851071547269 0.837316154284832 0.21665773 0.21159354 prediction 0.674632308569663 Functional Gain - EMC10;JOSD2 ENSG00000268518 ncRNA_exonic Human lincRNA chr19:50990085 chr19:50990086 . . 0 22 hPsi_associated_SNPs_24881 0 0 1 0 0 unknown 0.406097660051922 0.426649935296901 0 0 hPsi_site_18605 iPseU_CNN:0;iRNA_PseU:0 18606 chr7 30961693 30961693 1 + G A rs11537655 30961692 + 30961672 30961712 41 CCCCTGCAGCTGGCTGATGGTGTGAACTCGGGCCAGGGCCT CCCCTGCAGCTGGCTGATGGTATGAACTCGGGCCAGGGCCT < 41bp 0.422785002442299 0.837312918867821 0.3611455 0.6734773 prediction 0.674625837735643 Functional Gain - AQP1 ENSG00000240583;ENSG00000250424 CDS Human other chr7:30961692 chr7:30961693 nonsynonymous SNV 0.368 4 22 hPsi_associated_SNPs_24882 0 0 0 0 1 Endoplasmic reticulum 0.438624339039215 0.435850105997477 0.3469546 0 hPsi_site_18606 iPseU_CNN:0.3469546;iRNA_PseU:0 18607 chr3 51708495 51708495 1 + G A HNSC 51708494 + 51708474 51708514 41 TTCCACATGGGGCTCTATGGTGAGACTGGGCGGCTTTTCAC TTCCACATGGGGCTCTATGGTAAGACTGGGCGGCTTTTCAC < 41bp 0.553185574017446 0.890498052391342 0.23357272 0.64477354 prediction 0.674624956747793 Functional Gain - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51708494 chr3:51708495 nonsynonymous SNV 0.613 0 22 hPsi_associated_SNPs_24883 0 0 1 0 1 Ribosome 0.438716916519841 0.438718591333295 0.28954708 0 hPsi_site_18607 iPseU_CNN:0.28954708;iRNA_PseU:0 18608 chr11 59224784 59224784 1 + G A ESCA 59224783 + 59224763 59224803 41 AGATATTTTTTTCCTCTCTGTGATGGCCTATGACAGATACC AGATATTTTTTTCCTCTCTGTAATGGCCTATGACAGATACC < 41bp 0.544266757822806 0.881571100992008 0.23933735 0.81003 prediction 0.674608686338404 Functional Gain - OR4D6 ENSG00000166884 CDS Human protein_coding chr11:59224783 chr11:59224784 synonymous SNV . 0 22 hPsi_associated_SNPs_24884 0 0 0 0 0 unknown 0.438535257082769 0.438642175235067 0.62006 0 hPsi_site_18608 iPseU_CNN:0.62006;iRNA_PseU:0 18609 chr11 47605943 47605943 1 + G A BLCA 47605942 + 47605922 47605962 41 AGAGTTCCGCAAATTTGACCTGAACAGCCCCTGGGAGGCTT AGAGTTCCGCAAATTTGACCTAAACAGCCCCTGGGAGGCTT < 41bp 0.553984220973963 0.891287582003283 0.23718745 0.3127917 prediction 0.674606722058639 Functional Gain - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47605942 chr11:47605943 synonymous SNV . 0 22 hPsi_associated_SNPs_24885 0 0 1 0 1 Ribosome 0.438718592995106 0.438718592995238 0 0 hPsi_site_18609 iPseU_CNN:0;iRNA_PseU:0 18610 chr1 86913383 86913383 1 + C A UCEC 86913382 + 86913362 86913402 41 AAACAGGGATTTTATCCCATTCTTAATGCCACTGTCACTGC AAACAGGGATTTTATCCCATTATTAATGCCACTGTCACTGC < 41bp 0.518484725224159 0.855782959875355 0.31571174 0.40769947 prediction 0.674596469302392 Functional Gain - CLCA2 ENSG00000137975 CDS Human protein_coding chr1:86913382 chr1:86913383 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_24886 0 0 0 0 1 exosome 0.438718593004645 0.438718592847019 0 0 hPsi_site_18610 iPseU_CNN:0;iRNA_PseU:0 18611 chr8 145746173 145746173 1 + C A BLCA 145746172 + 145746152 145746192 41 GTGAGCTCAGCATGGGCTCCTCTCTCCTTTCAGGGAGGCTG GTGAGCTCAGCATGGGCTCCTATCTCCTTTCAGGGAGGCTG < 41bp 0.488346470456335 0.837289692838704 0.17686251 0.2570997 prediction 0.674579385677409 Functional Gain - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145746172 chr8:145746173 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24887 0 0 1 0 1 chromatin 0.438718587342443 0.43871859063387 0 0 hPsi_site_18611 iPseU_CNN:0;iRNA_PseU:0 18612 chrX 49645541 49645541 1 + G A UCEC 49645540 + 49645520 49645560 41 ACAGGTGGCCTGCAGTCTGATGTCACCTGTCAAGCCTGCCA ACAGGTGGCCTGCAGTCTGATATCACCTGTCAAGCCTGCCA < 41bp 0.551928842454144 0.889214658225539 0.32659796 0.67748356 prediction 0.674571631542791 Functional Gain - USP27X ENSG00000242013 CDS Human other chrX:49645540 chrX:49645541 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24888 0 0 0 0 0 exosome 0.438165946535431 0.43754105846553 0.35496712 0 hPsi_site_18612 iPseU_CNN:0.35496712;iRNA_PseU:0 18613 chr9 128724484 128724484 1 + G A UCEC 128724483 + 128724463 128724503 41 GTCCCAAGTCGGAGCCAATGTGCAATCACAGGTAGGAGAAA GTCCCAAGTCGGAGCCAATGTACAATCACAGGTAGGAGAAA < 41bp 0.441239632059445 0.837279203896776 0.37759218 0.69765633 prediction 0.674558407793552 Functional Gain - PBX3 ENSG00000167081 CDS Human protein_coding chr9:128724483 chr9:128724484 synonymous SNV . 0 22 hPsi_associated_SNPs_24889 0 0 0 0 1 Nucleus 0.438725782973674 0.438879236354096 0.39531266 0 hPsi_site_18613 iPseU_CNN:0.39531266;iRNA_PseU:0 18614 chr19 33628598 33628598 1 + C A UCEC 33628597 + 33628577 33628617 41 TTTCAGATCCCATTTAAAATTCTGAGTGGGCACGAGCACGC TTTCAGATCCCATTTAAAATTATGAGTGGGCACGAGCACGC < 41bp 0.515716771545106 0.852986970355612 0.27148783 0.5898128 prediction 0.674540397621011 Functional Gain - WDR88 ENSG00000166359 CDS Human protein_coding chr19:33628597 chr19:33628598 nonsynonymous SNV 0.842 0 22 hPsi_associated_SNPs_24890 0 0 0 0 2 exosome 0.438762343983036 0.438697607348357 0.1796256 0 hPsi_site_18614 iPseU_CNN:0.1796256;iRNA_PseU:0 18615 chr22 42967509 42967509 1 + G A rs552377211 42967508 + 42967488 42967528 41 TGAGCCCAGTCTCGGCTGACTGCAACCTCTGTCTCCTGGAT TGAGCCCAGTCTCGGCTGACTACAACCTCTGTCTCCTGGAT < 41bp 0.455375464252014 0.837269224694852 0.3284608 0.58403933 prediction 0.674538449389704 Functional Gain - SERHL2 ENSG00000182841 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr22:42967508 chr22:42967509 . . 0 22 hPsi_associated_SNPs_24891 0 0 1 0 0 chromatin 0.438509000244854 0.438718234034132 0.16807866 0 hPsi_site_18615 iPseU_CNN:0.16807866;iRNA_PseU:0 18616 chr1 39456951 39456951 1 + G A rs578039020 39456950 + 39456930 39456970 41 CCAGCGCCGCTGCCGGGTGCTGGAGGCGCCATTGGAGCCGG CCAGCGCCGCTGCCGGGTGCTAGAGGCGCCATTGGAGCCGG < 41bp 0.487628416110047 0.837268213310437 0.1835851 0.33966842 prediction 0.674536426620874 Functional Gain - AKIRIN1 ENSG00000174574 UTR5 Human protein_coding chr1:39456950 chr1:39456951 . . 0 22 hPsi_associated_SNPs_24892 0 0 0 0 0 Ribosome 0.438718593154775 0.438723960211818 0 0 hPsi_site_18616 iPseU_CNN:0;iRNA_PseU:0 18617 chr11 45924612 45924612 1 + G A CESC 45924611 + 45924591 45924631 41 TCGGCCATCGGAGAGGAATATGAGGAGGCCCCGCGGCCCCA TCGGCCATCGGAGAGGAATATAAGGAGGCCCCGCGGCCCCA < 41bp 0.436511964533689 0.837264374889935 0.27149308 0.3366974 prediction 0.67452874977987 Functional Gain - MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45924611 chr11:45924612 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24893 0 0 0 0 0 Endoplasmic reticulum 0.438718601632938 0.438718593292473 0 0 hPsi_site_18617 iPseU_CNN:0;iRNA_PseU:0 18618 chr12 88440660 88440660 1 + G A HNSC 88440659 + 88440639 88440679 41 AATAAGAAATCTACCTTCATTGAAGCACAATGATCTCGTGT AATAAGAAATCTACCTTCATTAAAGCACAATGATCTCGTGT < 41bp 0.457096052495739 0.837258437045168 0.34500676 0.5629298 prediction 0.674516874090337 Functional Gain - C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88440659 chr12:88440660 synonymous SNV . 0 22 hPsi_associated_SNPs_24894 0 0 1 1 1 Cytosol 0.438745040446238 0.438718637046618 0.1258596 0 hPsi_site_18618 iPseU_CNN:0.1258596;iRNA_PseU:0 18619 chrX 118604437 118604437 1 + G A STAD 118604436 + 118604416 118604456 41 ACTTCCTATCCATTTGACACTGTTCGCCGCCGCATGATGAT ACTTCCTATCCATTTGACACTATTCGCCGCCGCATGATGAT < 41bp 0.557342055411095 0.894600392588352 0.21121907 0.32407373 prediction 0.674516674354513 Functional Gain - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118604436 chrX:118604437 nonsynonymous SNV 0.127 2 22 hPsi_associated_SNPs_24895 0 0 1 0 1 Cytosol 0.43901713641204 0.438814121492708 0 0 hPsi_site_18619 iPseU_CNN:0;iRNA_PseU:0 18620 chr3 128780695 128780695 1 + G A LGG 128780694 + 128780674 128780714 41 CCATGGGGCTGTGGGTGGACTGCAGGGGCCACGGACTCACG CCATGGGGCTGTGGGTGGACTACAGGGGCCACGGACTCACG < 41bp 0.450189228504653 0.837253251240891 0.30998257 0.60925955 prediction 0.674506502481783 Functional Gain - GP9 ENSG00000169704 CDS Human protein_coding chr3:128780694 chr3:128780695 nonsynonymous SNV 0.877 4 22 hPsi_associated_SNPs_24896 0 0 0 0 0 Endoplasmic reticulum 0.438714121236743 0.438728311703906 0.2185191 0 hPsi_site_18620 iPseU_CNN:0.2185191;iRNA_PseU:0 18621 chrX 134166690 134166690 1 + G A BLCA 134166689 + 134166669 134166709 41 AAGGAGAGCCCCCTCCTCAATGATTACCGGGGCTTTCTGGC AAGGAGAGCCCCCTCCTCAATAATTACCGGGGCTTTCTGGC < 41bp 0.546400886913181 0.883645338282607 0.23751655 0.30146664 prediction 0.674488902738852 Functional Gain - RTL8C ENSG00000134590 CDS Human protein_coding chrX:134166689 chrX:134166690 nonsynonymous SNV 0.031 0 22 hPsi_associated_SNPs_24897 0 0 1 0 0 unknown 0.438718592998172 0.438718598987588 0 0 hPsi_site_18621 iPseU_CNN:0;iRNA_PseU:0 18622 chrX 54956506 54956506 1 + G A LUSC 54956505 + 54956485 54956525 41 GGTGGGGCACTTAGTACCGCTGCTGACTTCGGTGGTACTCC GGTGGGGCACTTAGTACCGCTACTGACTTCGGTGGTACTCC < 41bp 0.444794252832167 0.837237472225811 0.23206392 0.281466 prediction 0.674474944451622 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54956505 chrX:54956506 nonsynonymous SNV 0.576 0 22 hPsi_associated_SNPs_24898 0 0 0 0 0 exosome 0.438718592994979 0.438718592995101 0 0 hPsi_site_18622 iPseU_CNN:0;iRNA_PseU:0 18623 chr16 1260430 1260430 1 + C A UCEC 1260429 + 1260409 1260449 41 GTTTGATCACGTGGTCCTCGTCTTCATCTTCCTCAACTGCG GTTTGATCACGTGGTCCTCGTATTCATCTTCCTCAACTGCG < 41bp 0.487441714749652 0.83723684526726 0.6272905 0.9289192 prediction 0.674473690534521 Functional Gain - CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1260429 chr16:1260430 synonymous SNV . 0 22 hPsi_associated_SNPs_24899 0 0 0 0 2 nucleolus 0.435336309888767 0.440529775570877 0.6032574 0 hPsi_site_18623 iPseU_CNN:0.6032574;iRNA_PseU:0 18624 chr3 33166008 33166008 1 + C A LAML 33166007 + 33165987 33166027 41 TTCAAAGCCTTTTACGAGTGTCTCGCAGCCTGCGAGGGTTC TTCAAAGCCTTTTACGAGTGTATCGCAGCCTGCGAGGGTTC < 41bp 0.468273594696906 0.83723576427434 0.40271646 0.61849475 prediction 0.67447152854868 Functional Gain - CRTAP ENSG00000170275 CDS Human protein_coding chr3:33166007 chr3:33166008 nonsynonymous SNV 0.633 0 22 hPsi_associated_SNPs_24900 0 0 1 0 1 Endoplasmic reticulum 0.438718593050165 0.438718081824667 0.2369895 0 hPsi_site_18624 iPseU_CNN:0.2369895;iRNA_PseU:0 18625 chr19 49993817 49993817 1 + C A UCEC 49993816 + 49993796 49993836 41 CCGGGCCCCCAGCCGCATCTTCTGGCGGACCGTGCGAGGTG CCGGGCCCCCAGCCGCATCTTATGGCGGACCGTGCGAGGTG < 41bp 0.532856016041307 0.870090124245228 0.36858252 0.6428569 prediction 0.674468216407842 Functional Gain - RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993816 chr19:49993817 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_24901 0 0 1 0 2 Cytosol 0.438718138050355 0.43871866824213 0.2857138 0 hPsi_site_18625 iPseU_CNN:0.2857138;iRNA_PseU:0 18626 chr5 148748061 148748061 1 + C A UCEC 148748060 + 148748040 148748080 41 GTTTGCACTCCATGACCAGCTCTTCTACCTCAATGCCCTGG GTTTGCACTCCATGACCAGCTATTCTACCTCAATGCCCTGG < 41bp 0.524334103440458 0.861563284951129 0.32086998 0.6659311 prediction 0.674458363021343 Functional Gain - PCYOX1L ENSG00000145882 CDS Human protein_coding chr5:148748060 chr5:148748061 synonymous SNV . 0 22 hPsi_associated_SNPs_24902 0 0 1 0 0 Ribosome 0.438721048825729 0.438712901912437 0.3318622 0 hPsi_site_18626 iPseU_CNN:0.3318622;iRNA_PseU:0 18627 chr16 57005954 57005954 1 + G A SKCM 57005953 + 57005933 57005973 41 GTGGACATTTCCCTGACAGGTGATCCCGTCATCACAGCCTC GTGGACATTTCCCTGACAGGTAATCCCGTCATCACAGCCTC < 41bp 0.56325811455512 0.900483311945741 0.22527897 0.29400164 prediction 0.674450394781243 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:57005953 chr16:57005954 nonsynonymous SNV 0.063 0 22 hPsi_associated_SNPs_24903 0 0 0 0 2 exosome 0.438718469693579 0.438718593078712 0 0 hPsi_site_18627 iPseU_CNN:0;iRNA_PseU:0 18628 chr2 24246579 24246579 1 + C A UCEC 24246578 + 24246558 24246598 41 TGGCGCATGTGCCCTGGGCATCTCCACCCTCAGTCTGGAGT TGGCGCATGTGCCCTGGGCATATCCACCCTCAGTCTGGAGT < 41bp 0.508328430527224 0.845550136295145 0.25697866 0.4070824 prediction 0.674443411535842 Functional Gain - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24246578 chr2:24246579 synonymous SNV . 0 22 hPsi_associated_SNPs_24904 0 0 0 0 1 Endoplasmic reticulum 0.438718682786683 0.438729333725536 0 0 hPsi_site_18628 iPseU_CNN:0;iRNA_PseU:0 18629 chr11 134183887 134183887 1 + C A COAD 134183886 + 134183866 134183906 41 TTCCCTGGAGGGCTTTACCATCTATTCCCTGGAGATGAAAA TTCCCTGGAGGGCTTTACCATATATTCCCTGGAGATGAAAA < 41bp 0.482847369300012 0.837216279701889 0.7135721 0.6476909 prediction 0.674432559403778 Functional Gain - GLB1L3 ENSG00000166105 CDS Human protein_coding chr11:134183886 chr11:134183887 synonymous SNV . 0 22 hPsi_associated_SNPs_24905 0 0 0 0 2 Nucleus 0.438718592995102 0.438718592992349 0 0 hPsi_site_18629 iPseU_CNN:0;iRNA_PseU:0 18630 chr11 63988102 63988102 1 + C A rs3802933 63988101 + 63988081 63988121 41 GGGCCTCAACCCCTACGGCCTCGTTGCCCCCCGTTTCCAGC GGGCCTCAACCCCTACGGCCTAGTTGCCCCCCGTTTCCAGC < 41bp 0.480117456337474 0.837207444694536 0.27147055 0.33882004 prediction 0.674414889389072 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63988101 chr11:63988102 stopgain 0.656 0 22 hPsi_associated_SNPs_24906 0 0 1 0 1 Cytosol 0.438718538118473 0.438718592994806 0 0 hPsi_site_18630 iPseU_CNN:0;iRNA_PseU:0 18631 chr5 140475894 140475894 1 + C A LUAD 140475893 + 140475873 140475913 41 TGCCCCTCGCCTCCCTGGTCTCCATCAACGCGGACAACGGC TGCCCCTCGCCTCCCTGGTCTACATCAACGCGGACAACGGC < 41bp 0.513060763499355 0.850256739713871 0.36298537 0.7005075 prediction 0.674391952429033 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475893 chr5:140475894 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_24907 0 0 0 0 0 exosome 0.438720539563751 0.438728142996636 0.401015 0 hPsi_site_18631 iPseU_CNN:0.401015;iRNA_PseU:0 18632 chr2 207459539 207459539 1 + G A LUAD 207459538 + 207459518 207459558 41 GCCATGTGGCCCGTCTATGATGTGTTTAGATCGGAAGTGCC GCCATGTGGCCCGTCTATGATATGTTTAGATCGGAAGTGCC < 41bp 0.553298079572838 0.890483851121801 0.28040144 0.31975636 prediction 0.674371543097926 Functional Gain - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207459538 chr2:207459539 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24908 0 0 0 0 2 Ribosome 0.438716861307357 0.438718561761511 0 0 hPsi_site_18632 iPseU_CNN:0;iRNA_PseU:0 18633 chr6 18161643 18161643 1 + G A COAD 18161642 + 18161622 18161662 41 GGAAATGTGAAAAGGCAGGCTGTACGGCAACATGTCCTGTG GGAAATGTGAAAAGGCAGGCTATACGGCAACATGTCCTGTG < 41bp 0.429579872181215 0.837185481473234 0.19161817 0.2926944 prediction 0.674370962946468 Functional Gain - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18161642 chr6:18161643 nonsynonymous SNV 0.758 3 22 hPsi_associated_SNPs_24909 0 0 1 0 2 Cytosol 0.438769909132925 0.43869173754122 0 0 hPsi_site_18633 iPseU_CNN:0;iRNA_PseU:0 18634 chr15 63594572 63594572 1 + G A UCEC 63594571 + 63594551 63594591 41 GACGCTGGTCATTATCTTGCTGCATGTATTCTGGGGCATTG GACGCTGGTCATTATCTTGCTACATGTATTCTGGGGCATTG < 41bp 0.431196524511412 0.837182335045199 0.23619926 0.31143558 prediction 0.674364670090398 Functional Gain - APH1B ENSG00000138613 CDS Human protein_coding chr15:63594571 chr15:63594572 synonymous SNV . 0 22 hPsi_associated_SNPs_24910 0 0 0 0 2 Endoplasmic reticulum 0.438766202379521 0.438788623959539 0 0 hPsi_site_18634 iPseU_CNN:0;iRNA_PseU:0 18635 chr1 86960053 86960053 1 + C A UCEC 86960052 + 86960032 86960072 41 CGCCAAGGAGCCTCCCCAATTCTCAGGGCCAGTGTCACAGC CGCCAAGGAGCCTCCCCAATTATCAGGGCCAGTGTCACAGC < 41bp 0.474879667123276 0.837179371216312 0.5379341 0.6536388 prediction 0.674358742432623 Functional Gain - CLCA1 ENSG00000016490 CDS Human protein_coding chr1:86960052 chr1:86960053 nonsynonymous SNV 0.847 1 22 hPsi_associated_SNPs_24911 0 0 0 0 0 exosome 0.43871847409645 0.438718861092515 0.2314094 0 hPsi_site_18635 iPseU_CNN:0.2314094;iRNA_PseU:0 18636 chr2 105859409 105859409 1 + G A LUAD 105859408 + 105859388 105859428 41 AGCCAAGCACAGTCTACGTGTGCAATGAAAACCAGTCTGCG AGCCAAGCACAGTCTACGTGTACAATGAAAACCAGTCTGCG < 41bp 0.54369271299651 0.88087079455091 0.29800126 0.6400857 prediction 0.674356163108799 Functional Gain - GPR45 ENSG00000135973 CDS Human protein_coding chr2:105859408 chr2:105859409 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_24912 0 0 0 0 0 unknown 0.438718021537404 0.438717033017608 0.2801714 0 hPsi_site_18636 iPseU_CNN:0.2801714;iRNA_PseU:0 18637 chr1 152648628 152648628 1 + C A PAAD 152648627 + 152648607 152648647 41 CATGTTTCCCTGCAGTCTCTTCTTGCTGTGGTCCCAGCTCT CATGTTTCCCTGCAGTCTCTTATTGCTGTGGTCCCAGCTCT < 41bp 0.501484546970548 0.838656561992642 0.38500997 0.65614283 prediction 0.674344030044187 Functional Gain - LCE2C ENSG00000187180 CDS Human protein_coding chr1:152648627 chr1:152648628 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_24913 0 0 0 0 0 exosome 0.438718739057478 0.438718640661489 0.31228566 0 hPsi_site_18637 iPseU_CNN:0.31228566;iRNA_PseU:0 18638 chr5 1213679 1213679 1 + C A BLCA 1213678 + 1213658 1213698 41 CAATGGCATCGTCTTCCTCTTCACGCCCAACGTAAGTCCCC CAATGGCATCGTCTTCCTCTTAACGCCCAACGTAAGTCCCC < 41bp 0.512073748356687 0.849242982572728 0.3428054 0.82091767 prediction 0.674338468432082 Functional Gain - SLC6A19 ENSG00000174358 CDS Human protein_coding chr5:1213678 chr5:1213679 nonsynonymous SNV 0.933 4 22 hPsi_associated_SNPs_24914 0 0 0 0 1 cytosol 0.438713885540068 0.4387193316074 0.64183534 0 hPsi_site_18638 iPseU_CNN:0.64183534;iRNA_PseU:0 18639 chr10 134219375 134219375 1 + G A rs375456159 134219374 + 134219354 134219394 41 CGGCGCGTCAGCGCCCTCGGTGTCCAGAGAGGCTCGCCAAA CGGCGCGTCAGCGCCCTCGGTATCCAGAGAGGCTCGCCAAA < 41bp 0.554147109135322 0.891314592917603 0.65526444 0.76116246 prediction 0.674334967564563 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219374 chr10:134219375 synonymous SNV . 0 22 hPsi_associated_SNPs_24915 0 0 0 0 0 chromatin 0.438719019008447 0.438718621867704 0.21179604 0 hPsi_site_18639 iPseU_CNN:0.21179604;iRNA_PseU:0 18640 chr8 143558763 143558763 1 + G A CESC 143558762 + 143558742 143558782 41 GCAGTGCATGGTGCCTGGGATGAGTGGTCGCCCTGGAGCCT GCAGTGCATGGTGCCTGGGATAAGTGGTCGCCCTGGAGCCT < 41bp 0.551856208699421 0.889021623480363 0.45046625 0.7862974 prediction 0.674330829561885 Functional Gain - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143558762 chr8:143558763 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_24916 0 0 0 0 1 Nucleus 0.438731409045044 0.438712863166456 0.5725948 0 hPsi_site_18640 iPseU_CNN:0.5725948;iRNA_PseU:0 18641 chr9 131476333 131476333 1 + C A UCEC 131476332 + 131476312 131476352 41 CCTACCCCTGCAGGTGACCTTCTGCGATCCTGTCATTGAGA CCTACCCCTGCAGGTGACCTTATGCGATCCTGTCATTGAGA < 41bp 0.483038930998936 0.837158329221111 0.27906585 0.31978485 prediction 0.674316658442222 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131476332 chr9:131476333 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_24917 0 0 1 0 2 chromatin 0.438873667687796 0.438720456073592 0 0 hPsi_site_18641 iPseU_CNN:0;iRNA_PseU:0 18642 chr2 128408747 128408747 1 + C A rs34722685 128408746 + 128408726 128408766 41 CCTCAAGCTCCGCAGGCCCCTCTACGCACACCTGGCCTGTG CCTCAAGCTCCGCAGGCCCCTATACGCACACCTGGCCTGTG < 41bp 0.52490590757355 0.862063985312121 0.38268644 0.79362273 prediction 0.674316155477142 Functional Gain - GPR17 ENSG00000144230 CDS Human protein_coding chr2:128408746 chr2:128408747 synonymous SNV . 0 22 hPsi_associated_SNPs_24918 0 0 0 0 0 Endoplasmic reticulum 0.438718592989017 0.438718593198565 0.58724546 0 hPsi_site_18642 iPseU_CNN:0.58724546;iRNA_PseU:0 18643 chr1 117554259 117554259 1 + C A LUSC 117554258 + 117554238 117554278 41 TAGCCCTCACCTGTGAGGCATCCAAAGCCACAGCCCAACAT TAGCCCTCACCTGTGAGGCATACAAAGCCACAGCCCAACAT < 41bp 0.481812690297881 0.837154243230576 0.6746696 0.70906365 prediction 0.674308486461152 Functional Gain - CD101 ENSG00000134256 CDS Human protein_coding chr1:117554258 chr1:117554259 nonsynonymous SNV 0.860 1 22 hPsi_associated_SNPs_24919 0 0 0 0 1 cytosol 0.438718592995451 0.438719039594048 0.0687881000000001 0 hPsi_site_18643 iPseU_CNN:0.0687881000000001;iRNA_PseU:0 18644 chr11 19177416 19177416 1 + C A GBM 19177415 + 19177395 19177435 41 TATTGGACTTCAATTCAGATTCTTGGCTTTTAAAAGGATGT TATTGGACTTCAATTCAGATTATTGGCTTTTAAAAGGATGT < 41bp 0.496849709898832 0.837134386089887 0.3256191 0.32349098 prediction 0.674268772179773 Functional Gain - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19177415 chr11:19177416 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24920 0 0 1 0 2 Nucleus 0.438708766060228 0.438718766924175 0 0 hPsi_site_18644 iPseU_CNN:0;iRNA_PseU:0 18645 chr10 131506231 131506231 1 + G A BRCA 131506230 + 131506210 131506250 41 GATGCAGTGCACAGCCTGGCTGAATGCCTATTTCCACCAGC GATGCAGTGCACAGCCTGGCTAAATGCCTATTTCCACCAGC < 41bp 0.549564008469206 0.886694824724206 0.43232083 0.8987868 prediction 0.674261632509999 Functional Gain - MGMT ENSG00000170430 CDS Human protein_coding chr10:131506230 chr10:131506231 synonymous SNV . 0 22 hPsi_associated_SNPs_24921 0 0 0 0 2 Ribosome 0.438605861762455 0.438259613767647 0.7975736 0 hPsi_site_18645 iPseU_CNN:0.7975736;iRNA_PseU:0 18646 chr3 196449386 196449386 1 + C A UCEC 196449385 + 196449365 196449405 41 CCTGCAGGACTTTATGTGGATCCGTATGAGTTGGCTTCATT CCTGCAGGACTTTATGTGGATACGTATGAGTTGGCTTCATT < 41bp 0.508723836776552 0.845851998758268 0.3502882 0.7137903 prediction 0.674256323963433 Functional Gain - PIGX ENSG00000163964 CDS Human protein_coding chr3:196449385 chr3:196449386 nonsynonymous SNV 0.984 4 22 hPsi_associated_SNPs_24922 0 0 1 1 1 Ribosome 0.438707207785135 0.438714497323201 0.4275806 0 hPsi_site_18646 iPseU_CNN:0.4275806;iRNA_PseU:0 18647 chrX 142967502 142967502 1 + G A LAML 142967501 + 142967481 142967521 41 AGATAAGTGGTCCCCAGCCCTGCAGATCCGCACAGTTCTGC AGATAAGTGGTCCCCAGCCCTACAGATCCGCACAGTTCTGC < 41bp 0.452016241496693 0.837120954371723 0.30430844 0.46539143 prediction 0.674241908743447 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967501 chrX:142967502 synonymous SNV . 0 22 hPsi_associated_SNPs_24923 0 0 0 0 0 unknown 0.438728528652077 0.438673030629467 0 0 hPsi_site_18647 iPseU_CNN:0;iRNA_PseU:0 18648 chr6 31432828 31432828 1 + G A rs60908285 31432827 + 31432807 31432847 41 GGCACTTGGAATCACATGGTTGTTTTGTGTCCCATGGTCAA GGCACTTGGAATCACATGGTTATTTTGTGTCCCATGGTCAA < 41bp 0.534284048777671 0.87140158732992 0.38011548 0.6940936 prediction 0.674235077104498 Functional Gain - HCP5 ENSG00000206337 ncRNA_exonic Human sense_overlapping chr6:31432827 chr6:31432828 . . 0 22 hPsi_associated_SNPs_24924 0 0 0 0 0 unknown 0.438979545907175 0.439028188489655 0.3881872 0 hPsi_site_18648 iPseU_CNN:0.3881872;iRNA_PseU:0 18649 chr6 84649845 84649845 1 + C A UCEC 84649844 + 84649824 84649864 41 GTTCCAAGAATTAGAAGATCTCTTTTTGTTGGCAGCTGGAA GTTCCAAGAATTAGAAGATCTATTTTTGTTGGCAGCTGGAA < 41bp 0.495545021965468 0.837108588280864 0.28911537 0.35030067 prediction 0.674217176561728 Functional Gain - CYB5R4 ENSG00000065615 CDS Human protein_coding chr6:84649844 chr6:84649845 synonymous SNV . 0 22 hPsi_associated_SNPs_24925 0 0 1 0 2 Ribosome 0.438718593740589 0.438713503759805 0 0 hPsi_site_18649 iPseU_CNN:0;iRNA_PseU:0 18650 chr4 96761821 96761821 1 + G A HNSC 96761820 + 96761800 96761840 41 GCACAGGGCCCCCTGGGCGCTGGCATTGCTCTGGCCTGTAA GCACAGGGCCCCCTGGGCGCTAGCATTGCTCTGGCCTGTAA < 41bp 0.551306273127643 0.888412061868206 0.1671069 0.2780956 prediction 0.674211577481125 Functional Gain - PDHA2 ENSG00000163114 CDS Human protein_coding chr4:96761820 chr4:96761821 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_24926 0 0 0 0 0 unknown 0.438695370383216 0.438718593820691 0 0 hPsi_site_18650 iPseU_CNN:0;iRNA_PseU:0 18651 chr19 57802890 57802890 1 + C A LIHC 57802889 + 57802869 57802909 41 TACAGCCCTCATTCAACACTTCATTATCCATACTGGGGAGA TACAGCCCTCATTCAACACTTAATTATCCATACTGGGGAGA < 41bp 0.510223550650498 0.847324392827416 0.20049569 0.2057986 prediction 0.674201684353836 Functional Gain - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802889 chr19:57802890 nonsynonymous SNV 0.103 0 22 hPsi_associated_SNPs_24927 0 0 1 0 0 Nucleus 0.438717259126417 0.438720359633271 0 0 hPsi_site_18651 iPseU_CNN:0;iRNA_PseU:0 18652 chr19 41120272 41120272 1 + G A BLCA 41120271 + 41120251 41120291 41 CCCTGTGCGGGTCGCAGCGCTGTGAGAACTCTCCCGGCTCC CCCTGTGCGGGTCGCAGCGCTATGAGAACTCTCCCGGCTCC < 41bp 0.553854651480409 0.890955448912487 0.531711 0.8177618 prediction 0.674201594864157 Functional Gain - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41120271 chr19:41120272 nonsynonymous SNV 0.887 5 22 hPsi_associated_SNPs_24928 0 0 1 0 2 Cytosol 0.438304103939024 0.43871192798178 0.5721016 0 hPsi_site_18652 iPseU_CNN:0.5721016;iRNA_PseU:0 18653 chr1 86048669 86048669 1 + G A LUAD 86048668 + 86048648 86048688 41 TACAACTGCCCGCATGCCAATGAAGCAGCGTTTCCCTTCTA TACAACTGCCCGCATGCCAATAAAGCAGCGTTTCCCTTCTA < 41bp 0.446736714898335 0.837099762419513 0.28102684 0.34008443 prediction 0.674199524839026 Functional Gain - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048668 chr1:86048669 nonsynonymous SNV 0.966 2 22 hPsi_associated_SNPs_24929 0 0 1 0 0 Endoplasmic reticulum 0.438718618760902 0.438718613115468 0 0 hPsi_site_18653 iPseU_CNN:0;iRNA_PseU:0 18654 chr12 12980267 12980267 1 + G A LIHC 12980266 + 12980246 12980286 41 ACAGGATGATGAGGTTATGATGCTGACAGAACGCGTCGCTG ACAGGATGATGAGGTTATGATACTGACAGAACGCGTCGCTG < 41bp 0.431619024524469 0.837093256299356 0.2482855 0.62946707 prediction 0.674186512598712 Functional Gain - DDX47 ENSG00000213782 CDS Human protein_coding chr12:12980266 chr12:12980267 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_24930 0 0 1 0 2 nucleolus 0.438569860604592 0.438730446553508 0.25893414 0 hPsi_site_18654 iPseU_CNN:0.25893414;iRNA_PseU:0 18655 chr15 25456973 25456973 1 + G A GBM 25456972 + 25456952 25456992 41 ATGAGAACCCTATATTGTGTTGAAGAGAGGTGATGACTTAA ATGAGAACCCTATATTGTGTTAAAGAGAGGTGATGACTTAA < 41bp 0.509361789954009 0.846450816684387 0.31979394 0.4088563 prediction 0.674178053460758 Functional Gain - PWAR4;SNORD115-23 ENSG00000201331 ncRNA_exonic Human snoRNA chr15:25456972 chr15:25456973 . . 0 22 hPsi_associated_SNPs_24931 0 0 1 0 0 unknown 0.438794032138052 0.438719541339247 0 0 hPsi_site_18655 iPseU_CNN:0;iRNA_PseU:0 18656 chr7 99688217 99688217 1 + G A COAD 99688216 + 99688196 99688236 41 CATTGTCCCTCTCTTCCAGGTGTGTGAGATCATCGAGAGCC CATTGTCCCTCTCTTCCAGGTATGTGAGATCATCGAGAGCC < 41bp 0.561628086005343 0.898714342307132 0.5210279 0.81749135 prediction 0.67417251260358 Functional Gain - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688216 chr7:99688217 synonymous SNV . 0 22 hPsi_associated_SNPs_24932 0 0 1 0 2 Ribosome 0.438718610850232 0.438718671096169 0.5929269 0 hPsi_site_18656 iPseU_CNN:0.5929269;iRNA_PseU:0 18657 chr5 180651067 180651067 1 + G A UCEC 180651066 + 180651046 180651086 41 AGGAGGCGGTGTGCGCCATCTGCCTCGATTACTTCACGGAC AGGAGGCGGTGTGCGCCATCTACCTCGATTACTTCACGGAC < 41bp 0.449506500632184 0.83708587504509 0.19693139 0.682895 prediction 0.674171750090181 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651066 chr5:180651067 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24933 0 0 1 0 0 chromatin 0.387941575681906 0.437288135857903 0.36579 0 hPsi_site_18657 iPseU_CNN:0.36579;iRNA_PseU:0 18658 chr6 158358520 158358520 1 + C A UCEC 158358519 + 158358499 158358539 41 AATCACGAGTATAAAGGTTTTCTTGGCTGCTTCCCTGACAT AATCACGAGTATAAAGGTTTTATTGGCTGCTTCCCTGACAT < 41bp 0.519876336732941 0.856962023626695 0.5667285 0.44875425 prediction 0.674171373787509 Functional Gain - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158358519 chr6:158358520 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_24934 0 0 1 0 2 Ribosome 0.438988816038918 0.440170208069076 0 0 hPsi_site_18658 iPseU_CNN:0;iRNA_PseU:0 18659 chr6 26463574 26463574 1 + G A rs13195401 26463573 + 26463553 26463593 41 ACCCAAAGCCCCTCACAGTGTGGAGGGACCCCTACGGTGGG ACCCAAAGCCCCTCACAGTGTAGAGGGACCCCTACGGTGGG < 41bp 0.412815719021428 0.837081076990672 0.25615466 0.6087389 prediction 0.674162153981344 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26463573 chr6:26463574 stopgain 0.050 1 22 hPsi_associated_SNPs_24935 0 1 1 0 0 Endoplasmic reticulum 0.438708465407173 0.438713063039178 0.2174778 0 hPsi_site_18659 iPseU_CNN:0.2174778;iRNA_PseU:0 18660 chr1 180165660 180165660 1 + C A UCEC 180165659 + 180165639 180165679 41 CTGGAAAGCCGGAATTCAACTCTGGACCCTGGGAAGCCTGA CTGGAAAGCCGGAATTCAACTATGGACCCTGGGAAGCCTGA < 41bp 0.498300240001038 0.837069819695753 0.4628157 0.69313157 prediction 0.674139639391506 Functional Gain - QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180165659 chr1:180165660 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_24936 0 0 1 0 0 Ribosome 0.438718593254991 0.438718600269121 0.38626314 0 hPsi_site_18660 iPseU_CNN:0.38626314;iRNA_PseU:0 18661 chr19 59059693 59059693 1 + G A BLCA 59059692 + 59059672 59059712 41 GCTGCACCGGGCCCTCAAGATGATTGTGGATCCCGTGGAGC GCTGCACCGGGCCCTCAAGATAATTGTGGATCCCGTGGAGC < 41bp 0.420757354061296 0.837067790991309 0.24864313 0.73064876 prediction 0.674135581982618 Functional Gain - TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59059692 chr19:59059693 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24937 0 0 1 0 1 Cytosol 0.438718589659876 0.438718872042872 0.46129752 0 hPsi_site_18661 iPseU_CNN:0.46129752;iRNA_PseU:0 18662 chr11 65649979 65649979 1 + G A UCEC 65649978 + 65649958 65649998 41 CGCATCAGTTTCTGGGATTTTGTGGATGTCTCCGTGCAGGG CGCATCAGTTTCTGGGATTTTATGGATGTCTCCGTGCAGGG < 41bp 0.428630168679214 0.837063938073858 0.36341742 0.3498574 prediction 0.674127876147715 Functional Gain - CTSW ENSG00000172543 CDS Human protein_coding chr11:65649978 chr11:65649979 nonsynonymous SNV 0.159 3 22 hPsi_associated_SNPs_24938 0 0 0 0 1 exosome 0.438718148288221 0.438718857425217 0 0 hPsi_site_18662 iPseU_CNN:0;iRNA_PseU:0 18663 chr15 42139907 42139907 1 + C A UCEC 42139906 + 42139886 42139926 41 TGAACCTGTCTTCATCGGACTCTCCCTACCACTACACGAAG TGAACCTGTCTTCATCGGACTATCCCTACCACTACACGAAG < 41bp 0.492933663338199 0.837063174879127 0.23060876 0.7108077 prediction 0.674126349758253 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42139906 chr15:42139907 nonsynonymous SNV 0.732 4 22 hPsi_associated_SNPs_24939 0 0 1 0 1 unknown 0.438718539053793 0.43877992187597 0.4216154 0 hPsi_site_18663 iPseU_CNN:0.4216154;iRNA_PseU:0 18664 chr16 57269103 57269103 1 + G A BLCA 57269102 + 57269082 57269122 41 TGCTGTTCCCTTTGTTGTGATGAGGTAGCAGACACACAATT TGCTGTTCCCTTTGTTGTGATAAGGTAGCAGACACACAATT < 41bp 0.42990551436797 0.837062779717253 0.39536434 0.5256385 prediction 0.674125559434505 Functional Gain - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57269102 chr16:57269103 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24940 0 0 1 0 2 Ribosome 0.438718588410475 0.43674530603485 0.051277 0 hPsi_site_18664 iPseU_CNN:0.051277;iRNA_PseU:0 18665 chr1 2939112 2939112 1 + G A HNSC 2939111 + 2939091 2939131 41 TCCAGCAGCATCACCAAGTGTGATACCGACATCCAGAAGAT TCCAGCAGCATCACCAAGTGTAATACCGACATCCAGAAGAT < 41bp 0.456018092117237 0.837060005141444 0.33965492 0.7010335 prediction 0.674120010282888 Functional Gain - ACTRT2 ENSG00000169717 CDS Human protein_coding chr1:2939111 chr1:2939112 nonsynonymous SNV 0.547 1 22 hPsi_associated_SNPs_24941 0 0 0 0 0 unknown 0.439444366499398 0.438687611513984 0.402067 0 hPsi_site_18665 iPseU_CNN:0.402067;iRNA_PseU:0 18666 chr14 93399087 93399087 1 + G A LUSC 93399086 + 93399066 93399106 41 GGCCGCAGCTGCGACGAGGCTGGAGGCCATCCTCCCGGGAG GGCCGCAGCTGCGACGAGGCTAGAGGCCATCCTCCCGGGAG < 41bp 0.555536867047211 0.892596387122493 0.5774617 0.81257486 prediction 0.674119040150564 Functional Gain - CHGA ENSG00000100604 CDS Human protein_coding chr14:93399086 chr14:93399087 stopgain 0.950 0 22 hPsi_associated_SNPs_24942 0 0 0 0 0 exosome 0.438720223335108 0.438711460873242 0.47022632 0 hPsi_site_18666 iPseU_CNN:0.47022632;iRNA_PseU:0 18667 chr1 107973473 107973473 1 + G A SKCM 107973472 + 107973452 107973492 41 AACACTAGAGGGCAGCACTGTGAGTTATGCAGGCTGGGCTA AACACTAGAGGGCAGCACTGTAAGTTATGCAGGCTGGGCTA < 41bp 0.473449654109289 0.837057017398095 0.26214266 0.6624396 prediction 0.67411403479619 Functional Gain - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107973472 chr1:107973473 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_24943 0 0 0 3 1 exosome 0.439846414073854 0.438718872150246 0.3248792 0 hPsi_site_18667 iPseU_CNN:0.3248792;iRNA_PseU:0 18668 chrX 117528090 117528090 1 + C A UCEC 117528089 + 117528069 117528109 41 CAGAAAGTACGGTTAAGGATTCTCAGCCTTCTCTTGATTTG CAGAAAGTACGGTTAAGGATTATCAGCCTTCTCTTGATTTG < 41bp 0.515148597584963 0.852195904061076 0.34120786 0.41918534 prediction 0.674094612952227 Functional Gain - WDR44 ENSG00000131725 CDS Human protein_coding chrX:117528089 chrX:117528090 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24944 0 0 1 0 2 Ribosome 0.438726391692652 0.438717209098648 0 0 hPsi_site_18668 iPseU_CNN:0;iRNA_PseU:0 18669 chr7 6786744 6786744 1 + G A COAD 6786743 + 6786723 6786763 41 TTCGGACCCCAGGACGTCGATGAACTGATCTTCATGCTGAG TTCGGACCCCAGGACGTCGATAAACTGATCTTCATGCTGAG < 41bp 0.443818676885308 0.837046709873416 0.31191173 0.40175122 prediction 0.674093419746832 Functional Gain - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6786743 chr7:6786744 . . 0 22 hPsi_associated_SNPs_24945 0 0 0 0 2 unknown 0.438763858458218 0.438767450648877 0 0 hPsi_site_18669 iPseU_CNN:0;iRNA_PseU:0 18670 chr17 21086953 21086953 1 + C A UCEC 21086952 + 21086932 21086972 41 TGACCTTCGACCTCACAGACTCTGGGGCCATAGTTGCAGCA TGACCTTCGACCTCACAGACTATGGGGCCATAGTTGCAGCA < 41bp 0.525909231559929 0.862953236609661 0.31237996 0.67250293 prediction 0.674088010099464 Functional Gain - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21086952 chr17:21086953 nonsynonymous SNV 0.292 1 22 hPsi_associated_SNPs_24946 0 0 1 0 1 Endoplasmic reticulum 0.438718592979566 0.43871859299503 0.34500586 0 hPsi_site_18670 iPseU_CNN:0.34500586;iRNA_PseU:0 18671 chr16 15528527 15528527 1 + C A UCEC 15528526 + 15528506 15528546 41 CAGCGATGGAATTAAAGCAATCTTTGTCCACCCATCTGGAA CAGCGATGGAATTAAAGCAATATTTGTCCACCCATCTGGAA < 41bp 0.507128649222387 0.844172494798808 0.2154896 0.2974319 prediction 0.674087691152842 Functional Gain - C16orf45 ENSG00000166780 CDS Human protein_coding chr16:15528526 chr16:15528527 nonsynonymous SNV 0.964 2 22 hPsi_associated_SNPs_24947 0 0 0 0 1 Cytosol 0.438718592994966 0.438718592994339 0 0 hPsi_site_18671 iPseU_CNN:0;iRNA_PseU:0 18672 chr16 89650453 89650453 1 + C A LUSC 89650452 + 89650432 89650472 41 CCAGGTGATCGCCGAGGACATCTCGGGGAACAACGGCTACG CCAGGTGATCGCCGAGGACATATCGGGGAACAACGGCTACG < 41bp 0.477692095472968 0.837033972448848 0.3245147 0.50859004 prediction 0.674067944897697 Functional Gain - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89650452 chr16:89650453 synonymous SNV . 0 22 hPsi_associated_SNPs_24948 0 0 1 0 2 Nucleus 0.438718583233235 0.438719764723143 0.0171800799999999 0 hPsi_site_18672 iPseU_CNN:0.0171800799999999;iRNA_PseU:0 18673 chr11 605232 605232 1 + G A HNSC 605231 + 605211 605251 41 GGAGCCCTCTTTGGGGCTGCTGAGAGCGGATATTGGAGCTG GGAGCCCTCTTTGGGGCTGCTAAGAGCGGATATTGGAGCTG < 41bp 0.556177602546594 0.893207551773642 0.16762817 0.3446375 prediction 0.674059898454096 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:605231 chr11:605232 synonymous SNV . 0 22 hPsi_associated_SNPs_24949 0 0 1 0 1 Nucleus 0.438693924369947 0.438718592509659 0 0 hPsi_site_18673 iPseU_CNN:0;iRNA_PseU:0 18674 chr4 37841791 37841791 1 + C A UCEC 37841790 + 37841770 37841810 41 GGCCTCAAGCTTGGGACGATTCTTTAATTGATAGCAGTCCA GGCCTCAAGCTTGGGACGATTATTTAATTGATAGCAGTCCA < 41bp 0.494528566182926 0.837029326616368 0.10158038 0.17119691 prediction 0.674058653232736 Functional Gain - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37841790 chr4:37841791 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_24950 0 0 1 0 1 Nucleus 0.438718593279608 0.438718592988355 0 0 hPsi_site_18674 iPseU_CNN:0;iRNA_PseU:0 18675 chrX 47065186 47065186 1 + G A rs4339766 47065185 + 47065165 47065205 41 ATCGCTGGAGCCTGGGAAGTTGAGGCTGCAGTGAGCCGTGA ATCGCTGGAGCCTGGGAAGTTAAGGCTGCAGTGAGCCGTGA < 41bp 0.536929408643672 0.873955651917219 0.31002074 0.65240693 prediction 0.674052486547094 Functional Gain - INE1 ENSG00000224975 ncRNA_exonic Human sense_intronic chrX:47065185 chrX:47065186 . . 0 22 hPsi_associated_SNPs_24951 0 0 0 0 0 unknown 0.438718595268022 0.438718592842653 0.30481386 0 hPsi_site_18675 iPseU_CNN:0.30481386;iRNA_PseU:0 18676 chr3 119211199 119211199 1 + G A BLCA 119211198 + 119211178 119211218 41 TACTGGGAGAACCTCTTGAGTGAATACTCTAAATTCCTGTC TACTGGGAGAACCTCTTGAGTAAATACTCTAAATTCCTGTC < 41bp 0.540566331351379 0.877591282049075 0.24801713 0.3575972 prediction 0.674049901395393 Functional Gain - POGLUT1 ENSG00000163389 CDS Human protein_coding chr3:119211198 chr3:119211199 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_24952 0 0 0 0 1 Ribosome 0.438761210316367 0.438718514478254 0 0 hPsi_site_18676 iPseU_CNN:0;iRNA_PseU:0 18677 chr7 105195513 105195513 1 + C A GBM 105195512 + 105195492 105195532 41 CCCACAGCTTCCCGAAAGCTTCAGTTCCTGGAGTTACAGAA CCCACAGCTTCCCGAAAGCTTAAGTTCCTGGAGTTACAGAA < 41bp 0.50900245822793 0.84600928683933 0.4942743 0.53050315 prediction 0.674013657222799 Functional Gain - RINT1 ENSG00000135249 CDS Human protein_coding chr7:105195512 chr7:105195513 nonsynonymous SNV 0.890 1 22 hPsi_associated_SNPs_24953 0 0 1 0 1 Nucleus 0.438714585928663 0.438718593406478 0.0610063000000001 0 hPsi_site_18677 iPseU_CNN:0.0610063000000001;iRNA_PseU:0 18678 chrX 48463267 48463267 1 + C A UCEC 48463266 + 48463246 48463286 41 TGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGGCGG TGAGGACATGTGCGTGCACTTATTTGATGTGGAGCGGGCGG < 41bp 0.517274843589979 0.854281067402312 0.5653045 0.73533916 prediction 0.674012447624666 Functional Gain - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48463266 chrX:48463267 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24954 0 0 1 0 1 Ribosome 0.438454093869188 0.438721226704396 0.34006932 0 hPsi_site_18678 iPseU_CNN:0.34006932;iRNA_PseU:0 18679 chr1 87040309 87040309 1 + C A UCEC 87040308 + 87040288 87040328 41 TACAGTGGGAAAGGACACGTTCTTTCTCATCACATGGAACA TACAGTGGGAAAGGACACGTTATTTCTCATCACATGGAACA < 41bp 0.48311691433584 0.837000383547023 0.5677789 0.7484393 prediction 0.674000767094046 Functional Gain - CLCA4 ENSG00000016602 CDS Human protein_coding chr1:87040308 chr1:87040309 nonsynonymous SNV 0.855 0 22 hPsi_associated_SNPs_24955 0 0 0 0 1 unknown 0.438711616078596 0.439077434370305 0.3613208 0 hPsi_site_18679 iPseU_CNN:0.3613208;iRNA_PseU:0 18680 chr12 96360210 96360210 1 + G A UCEC 96360209 + 96360189 96360229 41 GCCACCATCAATGCAGCTTATGCACTGGGAAAGTCTCACAC GCCACCATCAATGCAGCTTATACACTGGGAAAGTCTCACAC < 41bp 0.425666285949754 0.83699643838538 0.3411927 0.37196082 prediction 0.673992876770761 Functional Gain - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96360209 chr12:96360210 nonsynonymous SNV 0.980 4 22 hPsi_associated_SNPs_24956 0 0 0 0 2 Cytosol 0.441538510030191 0.438859911537285 0 0 hPsi_site_18680 iPseU_CNN:0;iRNA_PseU:0 18681 chr5 914646 914646 1 + G A LUSC 914645 + 914625 914665 41 CTAGAGATGATTGGCTTCATTGAAAACAACGTGTCAAAATT CTAGAGATGATTGGCTTCATTAAAAACAACGTGTCAAAATT < 41bp 0.444596045625469 0.836994288650339 0.39575645 0.40448633 prediction 0.673988577300678 Functional Gain - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:914645 chr5:914646 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_24957 0 0 1 0 1 Ribosome 0.438718938036566 0.438691967518443 0 0 hPsi_site_18681 iPseU_CNN:0;iRNA_PseU:0 18682 chr19 55481633 55481633 1 + C A UCEC 55481632 + 55481612 55481652 41 GAAAAGATGCACCGAATGGATCTGTCTGAGAGAGCAAAGGA GAAAAGATGCACCGAATGGATATGTCTGAGAGAGCAAAGGA < 41bp 0.484613574646317 0.836987180010541 0.23715863 0.36306944 prediction 0.673974360021082 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55481632 chr19:55481633 nonsynonymous SNV 0.025 3 22 hPsi_associated_SNPs_24958 0 0 1 0 2 Cytosol 0.438717420968282 0.438625194584917 0 0 hPsi_site_18682 iPseU_CNN:0;iRNA_PseU:0 18683 chr18 59912063 59912063 1 + C A UCEC 59912062 + 59912042 59912082 41 CCTAAAGAGCGAGATCAGCTTCTCCACATACTTTTCAATTT CCTAAAGAGCGAGATCAGCTTATCCACATACTTTTCAATTT < 41bp 0.484328662575966 0.836980288151165 0.3115583 0.48796457 prediction 0.67396057630233 Functional Gain - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59912062 chr18:59912063 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_24959 0 0 1 0 2 Cytosol 0.438718593948396 0.438715256576721 0 0 hPsi_site_18683 iPseU_CNN:0;iRNA_PseU:0 18684 chr15 41195457 41195457 1 + G A UCEC 41195456 + 41195436 41195476 41 TGGCCGCTGAGTGTGTGTACTGTGGGGAGCTGATGATCCGC TGGCCGCTGAGTGTGTGTACTATGGGGAGCTGATGATCCGC < 41bp 0.451256182954059 0.836967750628212 0.4286839 0.69307005 prediction 0.673935501256424 Functional Gain - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41195456 chr15:41195457 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_24960 0 0 1 0 0 chromatin 0.438614100158998 0.436469592168001 0.3861401 0 hPsi_site_18684 iPseU_CNN:0.3861401;iRNA_PseU:0 18685 chr2 130738048 130738048 1 + C A COAD 130738047 + 130738027 130738067 41 AGAAAGAGGAAGTGATGTTATCATCACGCTAGTAGGAAATA AGAAAGAGGAAGTGATGTTATAATCACGCTAGTAGGAAATA < 41bp 0.501032057470549 0.83799287350036 0.41777882 0.6760285 prediction 0.67392163205962 Functional Gain - RAB6C ENSG00000222014 CDS Human protein_coding chr2:130738047 chr2:130738048 synonymous SNV . 0 22 hPsi_associated_SNPs_24961 0 0 0 0 0 exosome 0.439024069031666 0.441275194538426 0.352057 0 hPsi_site_18685 iPseU_CNN:0.352057;iRNA_PseU:0 18686 chr22 23437476 23437476 1 + G A rs539406626 23437475 + 23437455 23437495 41 GGGAGCCGGAGGCGGGGGGCTGCAGGGAGCACACCAGCGAC GGGAGCCGGAGGCGGGGGGCTACAGGGAGCACACCAGCGAC < 41bp 0.540651042982766 0.877608640548772 0.20756441 0.5917074 prediction 0.673915195132012 Functional Gain - GNAZ ENSG00000128266 UTR5 Human protein_coding chr22:23437475 chr22:23437476 . . 0 22 hPsi_associated_SNPs_24962 0 0 1 0 1 Ribosome 0.438718599484028 0.438729304016159 0.1834148 0 hPsi_site_18686 iPseU_CNN:0.1834148;iRNA_PseU:0 18687 chr16 706803 706803 1 + C A STAD 706802 + 706782 706822 41 CCCCACAAGGCCAACCTTTTTCTGTGGCTTTAGCAGTGGGG CCCCACAAGGCCAACCTTTTTATGTGGCTTTAGCAGTGGGG < 41bp 0.50481342085177 0.84176931400534 0.33020085 0.35238856 prediction 0.67391178630714 Functional Gain - WDR90 ENSG00000161996 CDS Human protein_coding chr16:706802 chr16:706803 nonsynonymous SNV 0.096 0 22 hPsi_associated_SNPs_24963 0 0 1 0 1 Cytosol 0.438718592995102 0.43871859299502 0 0 hPsi_site_18687 iPseU_CNN:0;iRNA_PseU:0 18688 chr12 102313916 102313916 1 + C A UCEC 102313915 + 102313895 102313935 41 ATATCACGTAGTGAGTGCGATCTGTGAATGGACAGTGGCCT ATATCACGTAGTGAGTGCGATATGTGAATGGACAGTGGCCT < 41bp 0.508534086735749 0.845489081814411 0.3016333 0.5372128 prediction 0.673909990157324 Functional Gain - DRAM1 ENSG00000136048 CDS Human protein_coding chr12:102313915 chr12:102313916 synonymous SNV . 0 22 hPsi_associated_SNPs_24964 0 0 1 0 2 Endoplasmic reticulum 0.438705534699254 0.438556964729388 0.0744256000000001 0 hPsi_site_18688 iPseU_CNN:0.0744256000000001;iRNA_PseU:0 18689 chrX 48649519 48649519 1 + G A SKCM 48649518 + 48649498 48649538 41 GTTAATCCCCAGAGGCTCCATGGAGTTCCCTGGCCTGGGGT GTTAATCCCCAGAGGCTCCATAGAGTTCCCTGGCCTGGGGT < 41bp 0.43852669739306 0.83695420242284 0.22910875 0.3014586 prediction 0.673908404845681 Functional Gain - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48649518 chrX:48649519 nonsynonymous SNV 0.987 2 22 hPsi_associated_SNPs_24965 0 0 1 0 1 Cytosol 0.438718593002205 0.438718593040678 0 0 hPsi_site_18689 iPseU_CNN:0;iRNA_PseU:0 18690 chr9 130236144 130236144 1 + C A ESCA 130236143 + 130236123 130236163 41 AATTCTGGAGCAAGATGGAATCGAGAACTCTCGGGACAGCC AATTCTGGAGCAAGATGGAATAGAGAACTCTCGGGACAGCC < 41bp 0.475466595191535 0.836948067859085 0.7581917 0.7998577 prediction 0.673896135718171 Functional Gain - LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130236143 chr9:130236144 synonymous SNV . 0 22 hPsi_associated_SNPs_24966 0 0 1 0 1 chromatin 0.438716800647286 0.438761183791784 0.083332 0 hPsi_site_18690 iPseU_CNN:0.083332;iRNA_PseU:0 18691 chr1 36785751 36785751 1 + C A LUAD 36785750 + 36785730 36785770 41 AGCTTTCTGAAGAAGAGGTGTCCACCAGAGATGACATTCAA AGCTTTCTGAAGAAGAGGTGTACACCAGAGATGACATTCAA < 41bp 0.497856455911994 0.836946858217421 0.29278782 0.65196323 prediction 0.673893716434842 Functional Gain - SH3D21 ENSG00000214193 CDS Human protein_coding chr1:36785750 chr1:36785751 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_24967 0 0 0 0 0 Nucleus 0.438780252625875 0.4387668548675 0.30392646 0 hPsi_site_18691 iPseU_CNN:0.30392646;iRNA_PseU:0 18692 chr9 37842147 37842147 1 + C A PRAD 37842146 + 37842126 37842166 41 ACTACAATAGCACTATGGGATCTGAGAAAATTGAACACCAA ACTACAATAGCACTATGGGATATGAGAAAATTGAACACCAA < 41bp 0.510944661695974 0.847882858764728 0.2346099 0.28298268 prediction 0.673876394137508 Functional Gain - DCAF10 ENSG00000122741 CDS Human protein_coding chr9:37842146 chr9:37842147 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_24968 0 0 1 0 1 Ribosome 0.438718413087969 0.438713813073794 0 0 hPsi_site_18692 iPseU_CNN:0;iRNA_PseU:0 18693 chr1 207651345 207651345 1 + G A BRCA 207651344 + 207651324 207651364 41 GTGTGAAGATGGGTATATGCTGGAAGGCAGTCCCCAGAGCC GTGTGAAGATGGGTATATGCTAGAAGGCAGTCCCCAGAGCC < 41bp 0.43008446462615 0.836924712052084 0.2629053 0.40154362 prediction 0.673849424104167 Functional Gain - CR2 ENSG00000117322 CDS Human protein_coding chr1:207651344 chr1:207651345 synonymous SNV . 0 22 hPsi_associated_SNPs_24969 0 0 0 0 1 Endoplasmic reticulum 0.438713707828215 0.438718574358517 0 0 hPsi_site_18693 iPseU_CNN:0;iRNA_PseU:0 18694 chr11 399087 399087 1 + C A LUSC 399086 + 399066 399106 41 CACAGGTGCCATGCGCAACCTCATCTACGACAACGCTGACA CACAGGTGCCATGCGCAACCTAATCTACGACAACGCTGACA < 41bp 0.48913958837296 0.836912119634602 0.19466203 0.4721473 prediction 0.673824239269203 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:399086 chr11:399087 synonymous SNV . 0 22 hPsi_associated_SNPs_24970 0 0 0 0 1 Ribosome 0.438761601022427 0.438718809895159 0 0 hPsi_site_18694 iPseU_CNN:0;iRNA_PseU:0 18695 chr21 31965096 31965096 1 + G A HNSC 31965095 + 31965075 31965115 41 CCAGCTTTGGCTACTACTATTGAGGACACCATGGGAGACTC CCAGCTTTGGCTACTACTATTAAGGACACCATGGGAGACTC < 41bp 0.490049215591769 0.836910865075438 0.29204163 0.67865217 prediction 0.673821730150876 Functional Gain - KRTAP6-3 ENSG00000212938 CDS Human protein_coding chr21:31965095 chr21:31965096 synonymous SNV . 0 22 hPsi_associated_SNPs_24971 0 0 0 0 0 unknown 0.438718550423363 0.438718681860769 0.35730434 0 hPsi_site_18695 iPseU_CNN:0.35730434;iRNA_PseU:0 18696 chr10 3189822 3189822 1 + G A BRCA 3189821 + 3189801 3189841 41 GCGGGCGTGAGGGTCCGGCCTGCCCTGATGGATGCGTACAG GCGGGCGTGAGGGTCCGGCCTACCCTGATGGATGCGTACAG < 41bp 0.453852006099841 0.836910623429573 0.21785721 0.6071811 prediction 0.673821246859147 Functional Gain - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189821 chr10:3189822 nonsynonymous SNV 0.003 4 22 hPsi_associated_SNPs_24972 0 0 0 0 0 Endoplasmic reticulum 0.438719205831881 0.438719456440394 0.2143622 0 hPsi_site_18696 iPseU_CNN:0.2143622;iRNA_PseU:0 18697 chr12 49666495 49666495 1 + G A ESCA 49666494 + 49666474 49666514 41 TATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCACGAACA TATGCCCCTGTCATCTCTGCTAAGAAAGCCTACCACGAACA < 41bp 0.557593866891066 0.894499128698868 0.18667805 0.1906063 prediction 0.673810523615604 Functional Gain - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666494 chr12:49666495 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_24973 0 0 1 0 0 Cytosol 0.438704203317448 0.439035661709352 0 0 hPsi_site_18697 iPseU_CNN:0;iRNA_PseU:0 18698 chr11 63885103 63885103 1 + G A SKCM 63885102 + 63885082 63885122 41 CAGACTCCATCCGCATCACGTGGAAGGCCACGCTCCCCGCC CAGACTCCATCCGCATCACGTAGAAGGCCACGCTCCCCGCC < 41bp 0.560624783228758 0.897526901070874 0.4757344 0.5983639 prediction 0.673804235684231 Functional Gain - FLRT1 ENSG00000126500 CDS Human protein_coding chr11:63885102 chr11:63885103 stopgain 1.000 1 22 hPsi_associated_SNPs_24974 0 0 0 0 0 chromatin 0.438718703433386 0.438778540282071 0.1967278 0 hPsi_site_18698 iPseU_CNN:0.1967278;iRNA_PseU:0 18699 chr12 52308303 52308303 1 + G A SKCM 52308302 + 52308282 52308322 41 AAGATCTTCTCCTCGAGGGATGAACAGTCCTGGTTCCGGGA AAGATCTTCTCCTCGAGGGATAAACAGTCCTGGTTCCGGGA < 41bp 0.562122782884702 0.899018616489407 0.2962379 0.35072803 prediction 0.673791667209409 Functional Gain - ACVRL1 ENSG00000139567 CDS Human protein_coding chr12:52308302 chr12:52308303 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_24975 0 0 0 0 1 Endoplasmic reticulum 0.438718616367985 0.438718593224674 0 0 hPsi_site_18699 iPseU_CNN:0;iRNA_PseU:0 18700 chr9 35792966 35792966 1 + C A PAAD 35792965 + 35792945 35792985 41 CTACTTCACCATCGAGGGCGTCTTTGAGGCCCTGCAGGGCA CTACTTCACCATCGAGGGCGTATTTGAGGCCCTGCAGGGCA < 41bp 0.525062699172229 0.861958400418956 0.34302616 0.71364176 prediction 0.673791402493454 Functional Gain - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792965 chr9:35792966 synonymous SNV . 0 22 hPsi_associated_SNPs_24976 0 0 0 0 0 chromatin 0.438718592999821 0.438718592955287 0.42728352 0 hPsi_site_18700 iPseU_CNN:0.42728352;iRNA_PseU:0 18701 chr4 39409068 39409068 1 + G A UCEC 39409067 + 39409047 39409087 41 CCCGATGGAATAGTAACAGTTGCCAACGCAAAAGGTCTGCA CCCGATGGAATAGTAACAGTTACCAACGCAAAAGGTCTGCA < 41bp 0.437501179217857 0.83689347013633 0.53917474 0.9520755 prediction 0.673786940272661 Functional Gain - KLB ENSG00000134962 CDS Human protein_coding chr4:39409067 chr4:39409068 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_24977 0 0 0 0 0 Cytosol 0.438753863818024 0.43878914565789 0.82580152 0 hPsi_site_18701 iPseU_CNN:0.82580152;iRNA_PseU:0 18702 chr5 1221860 1221860 1 + G A OV 1221859 + 1221839 1221879 41 GATCTCCTACCCGAACTGGGTGTATGTGGTGGTGGTGATTG GATCTCCTACCCGAACTGGGTATATGTGGTGGTGGTGATTG < 41bp 0.439756587128201 0.836887026695019 0.17611945 0.34518853 prediction 0.673774053390037 Functional Gain - SLC6A19 ENSG00000174358 CDS Human protein_coding chr5:1221859 chr5:1221860 synonymous SNV . 0 22 hPsi_associated_SNPs_24978 0 0 0 0 1 cytosol 0.438685698238127 0.438911469112913 0 0 hPsi_site_18702 iPseU_CNN:0;iRNA_PseU:0 18703 chr9 124546150 124546150 1 + G A rs116082214 124546149 + 124546129 124546169 41 CTTGGGTCTCTCTCGGCCCCTGTCTGTTCCCAGCCCCTGCA CTTGGGTCTCTCTCGGCCCCTATCTGTTCCCAGCCCCTGCA < 41bp 0.4467845609922 0.836883949365379 0.34013474 0.6471635 prediction 0.673767898730758 Functional Gain - DAB2IP ENSG00000136848 UTR3 Human protein_coding chr9:124546149 chr9:124546150 . . 0 22 hPsi_associated_SNPs_24979 0 0 1 0 0 Ribosome 0.437711316059755 0.438490118377644 0.294327 0 hPsi_site_18703 iPseU_CNN:0.294327;iRNA_PseU:0 18704 chr5 178310133 178310133 1 + C A UCEC 178310132 + 178310112 178310152 41 AAAAAGCCTTCATTCACAATTCATCCCTTCGTAAACATCAG AAAAAGCCTTCATTCACAATTAATCCCTTCGTAAACATCAG < 41bp 0.502062994807754 0.838945575192369 0.20664006 0.1880672 prediction 0.673765160769229 Functional Gain - ZNF354B ENSG00000178338 CDS Human protein_coding chr5:178310132 chr5:178310133 stopgain 1.000 0 22 hPsi_associated_SNPs_24980 0 0 1 0 0 nucleoplasm 0.438718622318305 0.438718592909346 0 0 hPsi_site_18704 iPseU_CNN:0;iRNA_PseU:0 18705 chr18 47906549 47906549 1 + G A PRAD 47906548 + 47906528 47906568 41 AAAATAGGAGATGAGATCATTGTAATAAATGAACTTCTAAA AAAATAGGAGATGAGATCATTATAATAAATGAACTTCTAAA < 41bp 0.456761128874797 0.836881886134292 0.39410782 0.56932443 prediction 0.673763772268585 Functional Gain - SKA1 ENSG00000154839 CDS Human protein_coding chr18:47906548 chr18:47906549 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_24981 0 0 1 0 2 Cytosol 0.438715435492796 0.438714789252735 0.13864886 0 hPsi_site_18705 iPseU_CNN:0.13864886;iRNA_PseU:0 18706 chr19 3204612 3204612 1 + G A rs61744344 3204611 + 3204591 3204631 41 TGAGGTACGGTTCTCCATGGTGCACAAGCGGATCAACCTGG TGAGGTACGGTTCTCCATGGTACACAAGCGGATCAACCTGG < 41bp 0.551939830222383 0.888819064715113 0.40185136 0.89735365 prediction 0.67375846898546 Functional Gain - NCLN ENSG00000125912 CDS Human protein_coding chr19:3204611 chr19:3204612 synonymous SNV . 0 22 hPsi_associated_SNPs_24982 0 0 1 1 0 Ribosome 0.438718592996516 0.438718610624523 0.7947073 0 hPsi_site_18706 iPseU_CNN:0.7947073;iRNA_PseU:0 18707 chr19 57743473 57743473 1 + G A SKCM 57743472 + 57743452 57743492 41 GAAATTTGGGAATGTGTACCTGGCTCGGCTCAAGGAAAGCC GAAATTTGGGAATGTGTACCTAGCTCGGCTCAAGGAAAGCC < 41bp 0.420541241682729 0.836878617873669 0.19125015 0.30447114 prediction 0.673757235747339 Functional Gain - AURKC ENSG00000105146 CDS Human protein_coding chr19:57743472 chr19:57743473 synonymous SNV . 0 22 hPsi_associated_SNPs_24983 0 0 0 0 1 Cytosol 0.438718592995102 0.438718592995083 0 0 hPsi_site_18707 iPseU_CNN:0;iRNA_PseU:0 18708 chr2 95537621 95537621 1 + C T UCS 95537622 - 95537602 95537642 41 CTGCAGCTCCGACTTCCAGCTGTGCGTGTCCTGCAGTCGCT CTGCAGCTCCGACTTCCAGCTATGCGTGTCCTGCAGTCGCT < 41bp 0.550968462016896 0.887845726649243 0.19909152 0.3117622 prediction 0.673754529264695 Functional Gain - TEKT4 ENSG00000163060 CDS Human protein_coding chr2:95537622 chr2:95537621 synonymous SNV . 0 22 hPsi_associated_SNPs_24984 0 0 0 0 0 chromatin 0.438716615518179 0.438720903021131 0 0 hPsi_site_18708 iPseU_CNN:0;iRNA_PseU:0 18709 chr22 39884255 39884255 1 + C A PAAD 39884254 + 39884234 39884274 41 CTTCCTCACCCAGGACGGCGTCTCGCGGCTGCGCAACCTGC CTTCCTCACCCAGGACGGCGTATCGCGGCTGCGCAACCTGC < 41bp 0.514669039184534 0.85154387349224 0.21751612 0.61050576 prediction 0.673749668615412 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884254 chr22:39884255 synonymous SNV . 0 22 hPsi_associated_SNPs_24985 0 0 1 0 0 Endoplasmic reticulum 0.438701701945291 0.438729147065185 0.22101152 0 hPsi_site_18709 iPseU_CNN:0.22101152;iRNA_PseU:0 18710 chr22 39448182 39448182 1 + C A UCEC 39448181 + 39448161 39448201 41 ACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAG ACGAGGTCACCTGGTACACATATTGGAGCCCTTGCCCAGAG < 41bp 0.468609651608546 0.836865451613941 0.5319881 0.44048238 prediction 0.673730903227882 Functional Gain - APOBEC3F ENSG00000128394 CDS Human protein_coding chr22:39448181 chr22:39448182 nonsynonymous SNV 0.304 3 22 hPsi_associated_SNPs_24986 0 0 0 0 0 Nucleus 0.438730446002721 0.438718585633107 0 0 hPsi_site_18710 iPseU_CNN:0;iRNA_PseU:0 18711 chrX 55033295 55033295 1 + C A UVM 55033294 + 55033274 55033314 41 CCCACCTCTGTGCACCCGCTTCCTCCCTGAGTTTGCAGGCA CCCACCTCTGTGCACCCGCTTACTCCCTGAGTTTGCAGGCA < 41bp 0.52324130441385 0.860106350862466 0.38378367 0.6916331 prediction 0.673730092897233 Functional Gain - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033294 chrX:55033295 nonsynonymous SNV 0.963 0 22 hPsi_associated_SNPs_24987 0 0 1 0 0 Ribosome 0.438715808420977 0.438701127655416 0.3832662 0 hPsi_site_18711 iPseU_CNN:0.3832662;iRNA_PseU:0 18712 chr7 150174463 150174463 1 + G A LUAD 150174462 + 150174442 150174482 41 GGACACATTTTTTGTCCTGGTGTTCCAGCTGGGACGATTCA GGACACATTTTTTGTCCTGGTATTCCAGCTGGGACGATTCA < 41bp 0.549165754993907 0.88602813696182 0.28463644 0.41109055 prediction 0.673724763935826 Functional Gain - GIMAP8 ENSG00000171115 CDS Human protein_coding chr7:150174462 chr7:150174463 synonymous SNV . 0 22 hPsi_associated_SNPs_24988 0 0 0 0 0 cytosol 0.438491676544046 0.438714503679605 0 0 hPsi_site_18712 iPseU_CNN:0;iRNA_PseU:0 18713 chr12 58152076 58152076 1 + C A UCEC 58152075 + 58152055 58152095 41 GTATGGCTTCATGGATGTCGTCTGCATAGGTGAGGGCACCT GTATGGCTTCATGGATGTCGTATGCATAGGTGAGGGCACCT < 41bp 0.48413932371743 0.836857239038475 0.1847918 0.30745584 prediction 0.673714478076951 Functional Gain - MARCH9 ENSG00000139266 CDS Human protein_coding chr12:58152075 chr12:58152076 synonymous SNV . 0 22 hPsi_associated_SNPs_24989 0 0 0 0 1 Ribosome 0.438703981706075 0.438719016625918 0 0 hPsi_site_18713 iPseU_CNN:0;iRNA_PseU:0 18714 chr14 24528595 24528595 1 + G A BLCA 24528594 + 24528574 24528614 41 GGATCTGAGCGGCAATGGCATGGAGGACATCGGGGCCAAGA GGATCTGAGCGGCAATGGCATAGAGGACATCGGGGCCAAGA < 41bp 0.426938746824053 0.836854442425194 0.7093379 0.90228915 prediction 0.673708884850388 Functional Gain - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24528594 chr14:24528595 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_24990 0 0 1 0 1 Endoplasmic reticulum 0.438718363618662 0.43871859294826 0.3859025 0 hPsi_site_18714 iPseU_CNN:0.3859025;iRNA_PseU:0 18715 chr7 23729036 23729036 1 + G A LIHC 23729035 + 23729015 23729055 41 CGCTGCAGGTGCAAACACTTTGCTGATCAGCACAGTGCTGC CGCTGCAGGTGCAAACACTTTACTGATCAGCACAGTGCTGC < 41bp 0.557994886177766 0.894847719618811 0.24655241 0.7057884 prediction 0.67370566688209 Functional Gain - FAM221A ENSG00000188732 CDS Human protein_coding chr7:23729035 chr7:23729036 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_24991 0 0 0 1 1 exosome 0.441208382570075 0.445549427685459 0.4115768 0 hPsi_site_18715 iPseU_CNN:0.4115768;iRNA_PseU:0 18716 chr12 100732689 100732689 1 + C A STAD 100732688 + 100732668 100732708 41 TATGTCTGCCCTTAATAATCTCTTTGGCCCTCAGAAACCCA TATGTCTGCCCTTAATAATCTATTTGGCCCTCAGAAACCCA < 41bp 0.497626034186018 0.836852058383294 0.2317873 0.3496585 prediction 0.673704116766588 Functional Gain - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732688 chr12:100732689 synonymous SNV . 0 22 hPsi_associated_SNPs_24992 0 0 0 0 0 chromatin 0.438718592995708 0.438718592995094 0 0 hPsi_site_18716 iPseU_CNN:0;iRNA_PseU:0 18717 chr9 19347055 19347055 1 + G A STAD 19347054 + 19347034 19347074 41 AGTAAGATGTGGGTAGCTGTTGCGTCTGCCTACAGCTACTC AGTAAGATGTGGGTAGCTGTTACGTCTGCCTACAGCTACTC < 41bp 0.542924513594739 0.879773035443599 0.60999775 0.81842 prediction 0.67369704369772 Functional Gain - DENND4C ENSG00000137145 CDS Human protein_coding chr9:19347054 chr9:19347055 nonsynonymous SNV 0.920 0 22 hPsi_associated_SNPs_24993 0 0 1 0 1 Nucleus 0.438627625962575 0.43869527234392 0.4168445 0 hPsi_site_18717 iPseU_CNN:0.4168445;iRNA_PseU:0 18718 chr11 113803138 113803138 1 + G A HNSC 113803137 + 113803117 113803157 41 ACATATGCTTTTCCATTTGATGTCCAGAATTGCAGCCTGAC ACATATGCTTTTCCATTTGATATCCAGAATTGCAGCCTGAC < 41bp 0.434529245099823 0.836844463138026 0.33938605 0.37760738 prediction 0.673688926276051 Functional Gain - HTR3B ENSG00000149305 CDS Human protein_coding chr11:113803137 chr11:113803138 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_24994 0 0 0 0 1 cytosol 0.438718217664699 0.43871856832367 0 0 hPsi_site_18718 iPseU_CNN:0;iRNA_PseU:0 18719 chr14 19378058 19378058 1 + C A GBM 19378057 + 19378037 19378077 41 TAATATCATGACTGGGCATCTCTGTGCCAAACTGGTCATAC TAATATCATGACTGGGCATCTATGTGCCAAACTGGTCATAC < 41bp 0.508284346856796 0.845120946366727 0.28833163 0.54033226 prediction 0.673673199019862 Functional Gain - OR11H12 ENSG00000257115 CDS Human protein_coding chr14:19378057 chr14:19378058 synonymous SNV . 0 22 hPsi_associated_SNPs_24995 0 0 0 0 0 unknown 0.439061682626481 0.438504547386709 0.08066452 0 hPsi_site_18719 iPseU_CNN:0.08066452;iRNA_PseU:0 18720 chr19 7677065 7677065 1 + G A SKCM 7677064 + 7677044 7677084 41 AGCAGCCACCAACTCCGAGGTGAAAATGACCAGCTTTGCAG AGCAGCCACCAACTCCGAGGTAAAAATGACCAGCTTTGCAG < 41bp 0.425251007672152 0.836820144096292 0.2808763 0.46264648 prediction 0.673640288192584 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677064 chr19:7677065 synonymous SNV . 0 22 hPsi_associated_SNPs_24996 0 0 0 0 0 nucleus 0.438718592987846 0.438718590936582 0 0 hPsi_site_18720 iPseU_CNN:0;iRNA_PseU:0 18721 chr17 77080632 77080632 1 + G A UCEC 77080631 + 77080611 77080651 41 TTTCCCCAGGTTATTTTCCCTGCAGGCCCCAGTGCCACCCA TTTCCCCAGGTTATTTTCCCTACAGGCCCCAGTGCCACCCA < 41bp 0.542315875663005 0.87913023473566 0.4375835 0.6591351 prediction 0.67362871814531 Functional Gain - ENGASE ENSG00000167280 CDS Human protein_coding chr17:77080631 chr17:77080632 synonymous SNV . 0 22 hPsi_associated_SNPs_24997 0 0 1 0 1 chromatin 0.438713722722763 0.438718291332612 0.3182702 0 hPsi_site_18721 iPseU_CNN:0.3182702;iRNA_PseU:0 18722 chr3 53223100 53223100 1 + C A UCEC 53223099 + 53223079 53223119 41 ACAGGGCCTGAAGTACACATTCTCTGTGGACTGGTGGTCTT ACAGGGCCTGAAGTACACATTATCTGTGGACTGGTGGTCTT < 41bp 0.53016920301801 0.866982157798269 0.3442669 0.5196822 prediction 0.673625909560518 Functional Gain - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53223099 chr3:53223100 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_24998 0 0 0 0 1 Cytosol 0.43871525436705 0.438718631794207 0.0393644 0 hPsi_site_18722 iPseU_CNN:0.0393644;iRNA_PseU:0 18723 chr5 120022338 120022338 1 + G A COAD 120022337 + 120022317 120022357 41 CCCTATCAGACCTGCAACTGTGCCTCCTCCCACTGCACCAA CCCTATCAGACCTGCAACTGTACCTCCTCCCACTGCACCAA < 41bp 0.555821419813526 0.892633883272714 0.27610335 0.6153489 prediction 0.673624926918377 Functional Gain - PRR16 ENSG00000184838 CDS Human protein_coding chr5:120022337 chr5:120022338 synonymous SNV . 0 22 hPsi_associated_SNPs_24999 0 0 0 0 0 Cytosol 0.438772987322891 0.43871525943058 0.2306978 0 hPsi_site_18723 iPseU_CNN:0.2306978;iRNA_PseU:0 18724 chr14 73425478 73425478 1 + G A rs76310328 73425477 + 73425457 73425497 41 GCGCCGGGGCTGCTCATGGCTGTCGGGCAGGACCTTTACTG GCGCCGGGGCTGCTCATGGCTATCGGGCAGGACCTTTACTG < 41bp 0.439418701873789 0.836810622038309 0.21432811 0.3543924 prediction 0.673621244076618 Functional Gain - DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73425477 chr14:73425478 nonsynonymous SNV 0.491 2 22 hPsi_associated_SNPs_25000 0 0 0 0 0 chromatin 0.43863905061967 0.438690590320983 0 0 hPsi_site_18724 iPseU_CNN:0;iRNA_PseU:0 18725 chr3 184008373 184008373 1 + G A OV 184008372 + 184008352 184008392 41 ATGACCCCCCAGACAGTGAATGCCTACTACCTTCCAACTAA ATGACCCCCCAGACAGTGAATACCTACTACCTTCCAACTAA < 41bp 0.430228535468306 0.836808227332916 0.36990023 0.76910913 prediction 0.673616454665833 Functional Gain - ECE2 ENSG00000145194 CDS Human protein_coding chr3:184008372 chr3:184008373 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_25001 0 0 0 0 2 Ribosome 0.438718592995102 0.438718592995102 0.53821826 0 hPsi_site_18725 iPseU_CNN:0.53821826;iRNA_PseU:0 18726 chr7 56007182 56007182 1 + C A COAD 56007181 + 56007161 56007201 41 AGGCCTTCAGCCACACCTCATCTCTTAGCCAGCCTCAGATG AGGCCTTCAGCCACACCTCATATCTTAGCCAGCCTCAGATG < 41bp 0.479988159048685 0.836807927738456 0.35872144 0.695718 prediction 0.673615855476912 Functional Gain - ZNF713 ENSG00000178665 CDS Human protein_coding chr7:56007181 chr7:56007182 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25002 0 0 0 0 0 Nucleus 0.438614739393622 0.438730406006341 0.391436 0 hPsi_site_18726 iPseU_CNN:0.391436;iRNA_PseU:0 18727 chr20 60882434 60882434 1 + G A ESCA 60882433 + 60882413 60882453 41 CTTGCCCCTCGCAGGTGGGCTGGGGGCCCTGACTGGACCTG CTTGCCCCTCGCAGGTGGGCTAGGGGCCCTGACTGGACCTG < 41bp 0.426308393057443 0.836805740779378 0.26399708 0.46826068 prediction 0.673611481558756 Functional Gain - ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882433 chr20:60882434 synonymous SNV . 0 22 hPsi_associated_SNPs_25003 0 0 1 0 2 Ribosome 0.438717923392624 0.438722052851509 0 0 hPsi_site_18727 iPseU_CNN:0;iRNA_PseU:0 18728 chr12 104335270 104335270 1 + C A UCEC 104335269 + 104335249 104335289 41 CAATTTTATTTGTACCCACATCTGCTCCACGTGGTCTGTTT CAATTTTATTTGTACCCACATATGCTCCACGTGGTCTGTTT < 41bp 0.50106510231295 0.837869994622432 0.5786413 0.506399 prediction 0.673609784618964 Functional Gain - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104335269 chr12:104335270 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25004 0 0 1 0 2 Nucleus 0.440836781260951 0.438757017249842 0 0 hPsi_site_18728 iPseU_CNN:0;iRNA_PseU:0 18729 chr1 114524242 114524242 1 + G A GBM 114524241 + 114524221 114524261 41 GCCAGCGGCACCCTGACCCCTGAACGGGCAGCACTCCCTTA GCCAGCGGCACCCTGACCCCTAAACGGGCAGCACTCCCTTA < 41bp 0.424255125015111 0.836804233251804 0.17921907 0.21928364 prediction 0.673608466503609 Functional Gain - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524241 chr1:114524242 nonsynonymous SNV 0.717 4 22 hPsi_associated_SNPs_25005 0 0 1 0 0 exosome 0.438718562293331 0.438718593017437 0 0 hPsi_site_18729 iPseU_CNN:0;iRNA_PseU:0 18730 chr17 51901687 51901687 1 + C T SKCM 51901688 - 51901668 51901708 41 TATCCGTCCTGACTTCAGGATGATCTGGAACACTGCATGGC TATCCGTCCTGACTTCAGGATAATCTGGAACACTGCATGGC < 41bp 0.548918007380354 0.885711007033382 0.35229182 0.8512267 prediction 0.673585999306057 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901688 chr17:51901687 synonymous SNV . 0 22 hPsi_associated_SNPs_25006 0 0 0 0 0 exosome 0.438718436719221 0.438719033057517 0.7024534 0 hPsi_site_18730 iPseU_CNN:0.7024534;iRNA_PseU:0 18731 chr18 2587897 2587897 1 + G A UCEC 2587896 + 2587876 2587916 41 TGCCGACAGCTTTGATGAGATGAATGCAGAGCTGCAGTCAA TGCCGACAGCTTTGATGAGATAAATGCAGAGCTGCAGTCAA < 41bp 0.551866167474312 0.888657050648636 0.27249578 0.52779084 prediction 0.673581766348648 Functional Gain - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2587896 chr18:2587897 nonsynonymous SNV 0.963 0 22 hPsi_associated_SNPs_25007 0 0 1 0 2 Cytosol 0.43908198150328 0.438658590620167 0.05558168 0 hPsi_site_18731 iPseU_CNN:0.05558168;iRNA_PseU:0 18732 chr11 117109655 117109655 1 + G A GBM 117109654 + 117109634 117109674 41 AGCAGCTTGCCTCCAGGAATTGCTCTGAAGAGAAATCCCCA AGCAGCTTGCCTCCAGGAATTACTCTGAAGAGAAATCCCCA < 41bp 0.423854033481921 0.836789419500739 0.3135392 0.55074805 prediction 0.673578839001478 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117109654 chr11:117109655 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25008 0 0 1 0 0 chromatin 0.438720404641677 0.438832504433873 0.1014961 0 hPsi_site_18732 iPseU_CNN:0.1014961;iRNA_PseU:0 18733 chr7 140380856 140380856 1 + G A rs147086600 140380855 + 140380835 140380875 41 TCTGAAGGAGAGTGTGCCTGTGTCCAGTTACCAGCAGGCAG TCTGAAGGAGAGTGTGCCTGTATCCAGTTACCAGCAGGCAG < 41bp 0.42559917939132 0.836786952094217 0.23932171 0.3408848 prediction 0.673573904188433 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140380855 chr7:140380856 synonymous SNV . 0 22 hPsi_associated_SNPs_25009 0 0 0 0 2 Ribosome 0.438768694088787 0.43870538661666 0 0 hPsi_site_18733 iPseU_CNN:0;iRNA_PseU:0 18734 chr1 32050597 32050597 1 + G A UCEC 32050596 + 32050576 32050616 41 CAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTG CAGCAGCAGGGCTGCCGCGGTAGGCGTCTCGATGGTGCCTG < 41bp 0.426542676781937 0.836779950262287 0.45337427 0.8844818 prediction 0.673559900524574 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32050596 chr1:32050597 nonsynonymous SNV 0.898 5 22 hPsi_associated_SNPs_25010 0 0 0 0 0 Ribosome 0.438734666717085 0.438604860317542 0.7689636 0 hPsi_site_18734 iPseU_CNN:0.7689636;iRNA_PseU:0 18735 chr2 11702668 11702668 1 + C A BRCA 11702667 + 11702647 11702687 41 AAATGGCCCCCCAAACCCTTTCCAGCTGCACCCTCTGCCTG AAATGGCCCCCCAAACCCTTTACAGCTGCACCCTCTGCCTG < 41bp 0.464847755269645 0.836778683612344 0.37798962 0.65394247 prediction 0.673557367224688 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11702667 chr2:11702668 nonsynonymous SNV 0.860 2 22 hPsi_associated_SNPs_25011 0 0 0 0 2 Nucleus 0.438718592992378 0.438718592988982 0.30788494 0 hPsi_site_18735 iPseU_CNN:0.30788494;iRNA_PseU:0 18736 chr5 179146757 179146757 1 + C A rs143596594 179146756 + 179146736 179146776 41 GAGCCTGAGTACGTACCTGATCCAGACGCAGAGAAACCTGA GAGCCTGAGTACGTACCTGATACAGACGCAGAGAAACCTGA < 41bp 0.47987127095668 0.836776370397738 0.50367963 0.7983638 prediction 0.673552740795476 Functional Gain - CANX ENSG00000127022 CDS Human protein_coding chr5:179146756 chr5:179146757 nonsynonymous SNV 0.185 4 22 hPsi_associated_SNPs_25012 0 0 1 0 2 Nucleus 0.438717814545179 0.438362187746928 0.58936834 0 hPsi_site_18736 iPseU_CNN:0.58936834;iRNA_PseU:0 18737 chr2 158980286 158980286 1 + G A STAD 158980285 + 158980265 158980305 41 AGGCCGACTAGATGGAGCACTGTGCTCCTTTTCCAGAGAAA AGGCCGACTAGATGGAGCACTATGCTCCTTTTCCAGAGAAA < 41bp 0.441644834196515 0.836776215902765 0.3168113 0.6708448 prediction 0.673552431805529 Functional Gain - UPP2 ENSG00000007001 CDS Human protein_coding chr2:158980285 chr2:158980286 synonymous SNV . 0 22 hPsi_associated_SNPs_25013 0 0 0 0 1 Cytosol 0.438637641273576 0.436052164601695 0.3416896 0 hPsi_site_18737 iPseU_CNN:0.3416896;iRNA_PseU:0 18738 chr2 176981774 176981774 1 + G A UCEC 176981773 + 176981753 176981793 41 CCAAAATATGGGTATGAATGTGCATCCTTATATACCTCAAG CCAAAATATGGGTATGAATGTACATCCTTATATACCTCAAG < 41bp 0.538335603441013 0.875100816547564 0.30735365 0.5726784 prediction 0.673530426213101 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981773 chr2:176981774 synonymous SNV . 0 22 hPsi_associated_SNPs_25014 0 0 1 0 0 exosome 0.438718553726156 0.438718592573117 0.1453568 0 hPsi_site_18738 iPseU_CNN:0.1453568;iRNA_PseU:0 18739 chr15 90127606 90127606 1 + C A UCEC 90127605 + 90127585 90127625 41 CAGAAACCAGTCAGAATTTTTCTAAAAGGCTCAGTGGCCCA CAGAAACCAGTCAGAATTTTTATAAAAGGCTCAGTGGCCCA < 41bp 0.475265526836155 0.836762589127571 0.6556343 0.6636063 prediction 0.673525178255141 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90127605 chr15:90127606 nonsynonymous SNV 0.485 3 22 hPsi_associated_SNPs_25015 0 0 1 0 2 chromatin 0.438718598219884 0.438721537644334 0.015944 0 hPsi_site_18739 iPseU_CNN:0.015944;iRNA_PseU:0 18740 chr11 124789836 124789836 1 + G A BLCA 124789835 + 124789815 124789855 41 GTAGATTACTGCCACTCCTATGAACTGTTCAATAGGCGGTG GTAGATTACTGCCACTCCTATAAACTGTTCAATAGGCGGTG < 41bp 0.453628740251827 0.836760665125029 0.26317596 0.36430806 prediction 0.673521330250057 Functional Gain - HEPN1 ENSG00000221932 CDS Human protein_coding chr11:124789835 chr11:124789836 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_25016 0 0 0 0 0 nucleus 0.438722050890635 0.438716671412377 0 0 hPsi_site_18740 iPseU_CNN:0;iRNA_PseU:0 18741 chr5 41927328 41927328 1 + G A UCEC 41927327 + 41927307 41927347 41 ATATCTGAGGTCACTGATGGTGCATTTTTTGACTACATGGC ATATCTGAGGTCACTGATGGTACATTTTTTGACTACATGGC < 41bp 0.543625671981444 0.880379419483166 0.16546616 0.28028932 prediction 0.673507495003445 Functional Gain - FBXO4 ENSG00000151876 CDS Human protein_coding chr5:41927327 chr5:41927328 nonsynonymous SNV 0.981 0 22 hPsi_associated_SNPs_25017 0 0 1 0 0 Cytosol 0.438676983731046 0.438712162647422 0 0 hPsi_site_18741 iPseU_CNN:0;iRNA_PseU:0 18742 chr2 207310210 207310210 1 + C A COAD 207310209 + 207310189 207310229 41 TCGGAAAGCCCTTATCACGTTCTTGACACAAAGGCAAGACA TCGGAAAGCCCTTATCACGTTATTGACACAAAGGCAAGACA < 41bp 0.51003232404625 0.846781579236747 0.7255933 0.6322693 prediction 0.673498510380992 Functional Gain - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207310209 chr2:207310210 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_25018 0 0 0 2 1 Ribosome 0.438738864371486 0.438718710549919 0 0 hPsi_site_18742 iPseU_CNN:0;iRNA_PseU:0 18743 chr2 239140992 239140992 1 + G A SKCM 239140991 + 239140971 239141011 41 ACATGACTGAGGATGAGCTGTGGGAGTTCTTCTCTCAGTAT ACATGACTGAGGATGAGCTGTAGGAGTTCTTCTCTCAGTAT < 41bp 0.477141588991327 0.836748799420818 0.2557668 0.66971457 prediction 0.673497598841635 Functional Gain - LOC643387 ENSG00000225057 ncRNA_exonic Human processed_transcript chr2:239140991 chr2:239140992 . . 0 22 hPsi_associated_SNPs_25019 0 0 0 0 0 unknown 0.438679084200933 0.438966553941 0.33942914 0 hPsi_site_18743 iPseU_CNN:0.33942914;iRNA_PseU:0 18744 chr11 64807160 64807160 1 + G A LUAD 64807159 + 64807139 64807179 41 GAGCATTCTCTCTCCACAGGTGACCCGTTGCCTGCCCGCCA GAGCATTCTCTCTCCACAGGTAACCCGTTGCCTGCCCGCCA < 41bp 0.432127789332866 0.836741751539394 0.24239501 0.30133766 prediction 0.673483503078789 Functional Gain - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64807159 chr11:64807160 nonsynonymous SNV 0.171 3 22 hPsi_associated_SNPs_25020 0 0 0 0 1 Ribosome 0.438719076251343 0.438716720981592 0 0 hPsi_site_18744 iPseU_CNN:0;iRNA_PseU:0 18745 chr2 97427660 97427660 1 + C A CESC 97427659 + 97427639 97427679 41 CACCATCCTTCTCACCAAATTCTTTATGCTACTCACCTTCC CACCATCCTTCTCACCAAATTATTTATGCTACTCACCTTCC < 41bp 0.5143944064012 0.851134703088184 0.24990323 0.32209235 prediction 0.673480593373968 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97427659 chr2:97427660 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25021 0 0 1 0 0 chromatin 0.438718592992086 0.43871860662292 0 0 hPsi_site_18745 iPseU_CNN:0;iRNA_PseU:0 18746 chr20 35207333 35207333 1 + G A CESC 35207332 + 35207312 35207352 41 CCCCTCAGAGCAGGAGAAGCTGAGCCTTTCTGGACAGACCA CCCCTCAGAGCAGGAGAAGCTAAGCCTTTCTGGACAGACCA < 41bp 0.429759877108634 0.836739978666541 0.2316176 0.30146748 prediction 0.673479957333081 Functional Gain - TGIF2;TGIF2-C20orf24 ENSG00000118707;ENSG00000259399 CDS Human other chr20:35207332 chr20:35207333 synonymous SNV . 0 22 hPsi_associated_SNPs_25022 0 0 1 0 1 unknown 0.43871859206626 0.438718589841645 0 0 hPsi_site_18746 iPseU_CNN:0;iRNA_PseU:0 18747 chr19 54444779 54444779 1 + C A UCEC 54444778 + 54444758 54444798 41 CTCCAGCATCAACGACGAGGTCATGAACAGGCCCAGCAGCT CTCCAGCATCAACGACGAGGTAATGAACAGGCCCAGCAGCT < 41bp 0.477460631646864 0.836739104523325 0.2555229 0.85957193 prediction 0.673478209046651 Functional Gain - CACNG7 ENSG00000105605 CDS Human protein_coding chr19:54444778 chr19:54444779 synonymous SNV . 0 22 hPsi_associated_SNPs_25023 0 0 0 0 2 unknown 0.438718593001479 0.438718592996224 0.71914386 0 hPsi_site_18747 iPseU_CNN:0.71914386;iRNA_PseU:0 18748 chr19 17631821 17631821 1 + G A rs148164602 17631820 + 17631800 17631840 41 CCAGCCCCACACCGGGAAACTGTGCTGGTTCTTGGACGAGG CCAGCCCCACACCGGGAAACTATGCTGGTTCTTGGACGAGG < 41bp 0.447919847735682 0.836733999636656 0.45849836 0.6589732 prediction 0.673467999273311 Functional Gain - PGLS ENSG00000130313 CDS Human protein_coding chr19:17631820 chr19:17631821 synonymous SNV . 0 22 hPsi_associated_SNPs_25024 0 0 1 0 1 Cytosol 0.438718559302434 0.438718592864241 0.3179464 0 hPsi_site_18748 iPseU_CNN:0.3179464;iRNA_PseU:0 18749 chrX 47039859 47039859 1 + C A UCEC 47039858 + 47039838 47039878 41 GCAGTCGCATCAGTGCTGCCTCTGTGGCCAGCACTGCCATT GCAGTCGCATCAGTGCTGCCTATGTGGCCAGCACTGCCATT < 41bp 0.530297428318417 0.867031058990666 0.3099541 0.32775468 prediction 0.673467261344499 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47039858 chrX:47039859 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25025 0 0 0 0 2 Ribosome 0.438786564908455 0.438835488344022 0 0 hPsi_site_18749 iPseU_CNN:0;iRNA_PseU:0 18750 chr8 22423940 22423940 1 + G A BLCA 22423939 + 22423919 22423959 41 CTGAGTCCCCACAAAATGGCTGATGGAGGAAGCCCCTTCCT CTGAGTCCCCACAAAATGGCTAATGGAGGAAGCCCCTTCCT < 41bp 0.424710234257218 0.83673296519305 0.2616672 0.6804975 prediction 0.6734659303861 Functional Gain - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22423939 chr8:22423940 nonsynonymous SNV 0.948 2 22 hPsi_associated_SNPs_25026 0 0 1 0 2 Cytosol 0.438717634961495 0.438717479350408 0.360995 0 hPsi_site_18750 iPseU_CNN:0.360995;iRNA_PseU:0 18751 chr18 54424048 54424048 1 + C A UCEC 54424047 + 54424027 54424067 41 ACTGGAAAACGAGCAGCAGTTCTCTTCCAACAAGTGAAAGA ACTGGAAAACGAGCAGCAGTTATCTTCCAACAAGTGAAAGA < 41bp 0.503591263535244 0.840321670999151 0.65560555 0.79509175 prediction 0.673460814927814 Functional Gain - WDR7 ENSG00000091157 CDS Human protein_coding chr18:54424047 chr18:54424048 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25027 0 0 0 2 0 chromatin 0.438733914688089 0.436337792681352 0.2789724 0 hPsi_site_18751 iPseU_CNN:0.2789724;iRNA_PseU:0 18752 chrX 103359162 103359162 1 + G A UCEC 103359161 + 103359141 103359181 41 CTTGCGGGCAATGAAATTGGTGTTTGGGGAGTCTGAAAGCA CTTGCGGGCAATGAAATTGGTATTTGGGGAGTCTGAAAGCA < 41bp 0.560814522629641 0.897539862544124 0.36586553 0.6229358 prediction 0.673450679828966 Functional Gain - ZCCHC18 ENSG00000166707 CDS Human protein_coding chrX:103359161 chrX:103359162 synonymous SNV . 0 22 hPsi_associated_SNPs_25028 0 0 0 0 0 exosome 0.438718592992776 0.43871859297958 0.2458716 0 hPsi_site_18752 iPseU_CNN:0.2458716;iRNA_PseU:0 18753 chr12 122079219 122079219 1 + G A rs373332284 122079218 + 122079198 122079238 41 GCTCTTCCTAGCTGAGGTGGTGCTGCTCTGCTGGGTCAAGT GCTCTTCCTAGCTGAGGTGGTACTGCTCTGCTGGGTCAAGT < 41bp 0.454894377930033 0.836723941811719 0.3060897 0.7009282 prediction 0.673447883623438 Functional Gain - ORAI1 ENSG00000182500 CDS Human other chr12:122079218 chr12:122079219 synonymous SNV . 0 22 hPsi_associated_SNPs_25029 1 0 1 0 0 Endoplasmic reticulum 0.438727265147549 0.438784539431746 0.4018564 0 hPsi_site_18753 iPseU_CNN:0.4018564;iRNA_PseU:0 18754 chr17 43311537 43311537 1 + C A LIHC 43311536 + 43311516 43311556 41 TCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCAC TCAGCAAGGGTCCACCCTCCTACGTGCCCAAAAGCCGCCAC < 41bp 0.46542117210273 0.836711817276797 0.37520117 0.79870117 prediction 0.673423634553593 Functional Gain - FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43311536 chr17:43311537 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_25030 0 0 0 0 2 chromatin 0.438718783566361 0.438718300387489 0.59740234 0 hPsi_site_18754 iPseU_CNN:0.59740234;iRNA_PseU:0 18755 chr7 115891940 115891940 1 + G A COAD 115891939 + 115891919 115891959 41 ACCTGCCATGAACTCCTGGTTGACATGATTTATTTTTGGAA ACCTGCCATGAACTCCTGGTTAACATGATTTATTTTTGGAA < 41bp 0.444666959513319 0.836706689196501 0.13871288 0.1921457 prediction 0.673413378393003 Functional Gain - TES ENSG00000135269 CDS Human protein_coding chr7:115891939 chr7:115891940 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25031 0 0 1 0 2 Cytosol 0.438527250964067 0.438721219023903 0 0 hPsi_site_18755 iPseU_CNN:0;iRNA_PseU:0 18756 chr16 1291236 1291236 1 + G A LUSC 1291235 + 1291215 1291255 41 GTGGCCCTGGCAGGTGAGCCTGAGAGTCCACGGCCCATACT GTGGCCCTGGCAGGTGAGCCTAAGAGTCCACGGCCCATACT < 41bp 0.553671057828287 0.890376052484817 0.2189419 0.45276618 prediction 0.67340998931306 Functional Gain - TPSAB1 ENSG00000172236 CDS Human protein_coding chr16:1291235 chr16:1291236 synonymous SNV . 0 22 hPsi_associated_SNPs_25032 0 0 0 0 1 exosome 0.438739338870013 0.43871868565794 0 0 hPsi_site_18756 iPseU_CNN:0;iRNA_PseU:0 18757 chr19 12186728 12186728 1 + C A BRCA 12186727 + 12186707 12186747 41 TGTGGGAAAGCATTCGGTAGTCCCAATTCCCTTTATGAACA TGTGGGAAAGCATTCGGTAGTACCAATTCCCTTTATGAACA < 41bp 0.495036782734721 0.836700442992453 0.2772869 0.57690734 prediction 0.673400885984906 Functional Gain - ZNF844 ENSG00000223547 CDS Human protein_coding chr19:12186727 chr19:12186728 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25033 0 0 0 0 0 chromatin 0.438642847578561 0.438722707963567 0.15381468 0 hPsi_site_18757 iPseU_CNN:0.15381468;iRNA_PseU:0 18758 chr5 194841 194841 1 + G A ACC 194840 + 194820 194860 41 CAGCCCCCTACAGACCCCGCTGCGAGTACTGGACCTGGCCA CAGCCCCCTACAGACCCCGCTACGAGTACTGGACCTGGCCA < 41bp 0.453319269891323 0.836699400337395 0.28475493 0.825085 prediction 0.67339880067479 Functional Gain - LRRC14B ENSG00000185028 CDS Human protein_coding chr5:194840 chr5:194841 synonymous SNV . 0 22 hPsi_associated_SNPs_25034 0 0 0 0 1 exosome 0.438718596863878 0.438719953788705 0.65017 0 hPsi_site_18758 iPseU_CNN:0.65017;iRNA_PseU:0 18759 chr1 151262612 151262612 1 + C A BLCA 151262611 + 151262591 151262631 41 CTCCTAGTCAGTGAAAAAGTTCCCCTGTCGCCTGTGTGAGC CTCCTAGTCAGTGAAAAAGTTACCCTGTCGCCTGTGTGAGC < 41bp 0.486042393707763 0.836698981378726 0.2983572 0.76554704 prediction 0.673397962757452 Functional Gain - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151262611 chr1:151262612 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_25035 0 0 1 0 2 chromatin 0.438721768002027 0.438704483682068 0.53109408 0 hPsi_site_18759 iPseU_CNN:0.53109408;iRNA_PseU:0 18760 chr10 1061774 1061774 1 + G A UCEC 1061773 + 1061753 1061793 41 GACTCTGCTCCCCCGTCCTCTGTGGCCCGGAGTGGGAGTTG GACTCTGCTCCCCCGTCCTCTATGGCCCGGAGTGGGAGTTG < 41bp 0.413334884655196 0.836691557366896 0.43082452 0.6884893 prediction 0.673383114733791 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1061773 chr10:1061774 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_25036 0 0 1 0 2 Cytosol 0.437252085176027 0.438708836782966 0.3769786 0 hPsi_site_18760 iPseU_CNN:0.3769786;iRNA_PseU:0 18761 chr12 52450996 52450996 1 + G A STAD 52450995 + 52450975 52451015 41 ACCGGCTGACCAGGACCTGTTGCTGGAGTCGGCCTTCCTGG ACCGGCTGACCAGGACCTGTTACTGGAGTCGGCCTTCCTGG < 41bp 0.565734844779892 0.902426294317837 0.30272138 0.77604586 prediction 0.673382899075889 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52450995 chr12:52450996 nonsynonymous SNV 0.950 0 22 hPsi_associated_SNPs_25037 0 0 1 0 2 Endoplasmic reticulum 0.438513393636728 0.438919855473846 0.55209172 0 hPsi_site_18761 iPseU_CNN:0.55209172;iRNA_PseU:0 18762 chr6 3287119 3287119 1 + G A BLCA 3287118 + 3287098 3287138 41 AGGAGGCCGAGCTGCAGGAGTGAGGCCAGGGCGGTGAGGAT AGGAGGCCGAGCTGCAGGAGTAAGGCCAGGGCGGTGAGGAT < 41bp 0.544298984825551 0.880990105245115 0.23762974 0.49033535 prediction 0.673382240839128 Functional Gain - SLC22A23 ENSG00000137266 CDS Human protein_coding chr6:3287118 chr6:3287119 nonsynonymous SNV 0.983 3 22 hPsi_associated_SNPs_25038 0 0 0 0 0 Endoplasmic reticulum 0.438718591432943 0.438718736927651 0 0 hPsi_site_18762 iPseU_CNN:0;iRNA_PseU:0 18763 chr7 90042288 90042288 1 + G A UCEC 90042287 + 90042267 90042307 41 AGCATGCTGATCGCCATGGGTGCCCTGCTGCTCTGCCTGAT AGCATGCTGATCGCCATGGGTACCCTGCTGCTCTGCCTGAT < 41bp 0.558720548131085 0.895408502027797 0.34346724 0.6458556 prediction 0.673375907793425 Functional Gain - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042287 chr7:90042288 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25039 0 0 1 0 0 Ribosome 0.43871792578712 0.438786294179226 0.2917112 0 hPsi_site_18763 iPseU_CNN:0.2917112;iRNA_PseU:0 18764 chr22 37318275 37318275 1 + C A BLCA 37318274 + 37318254 37318294 41 TGCTGGCCCAGGGGCTGCTCTCCATGGCCCTGCTGGCCCTG TGCTGGCCCAGGGGCTGCTCTACATGGCCCTGCTGGCCCTG < 41bp 0.476149330642937 0.836686893395989 0.43139124 0.8616026 prediction 0.673373786791978 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37318274 chr22:37318275 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25040 0 0 0 0 1 Endoplasmic reticulum 0.438718592995208 0.438718583033631 0.7232052 0 hPsi_site_18764 iPseU_CNN:0.7232052;iRNA_PseU:0 18765 chr7 129040182 129040182 1 + G A GBM 129040181 + 129040161 129040201 41 CAGAAGATGACTTTTGGTGGTGTATCGATAGATGTGTGAAT CAGAAGATGACTTTTGGTGGTATATCGATAGATGTGTGAAT < 41bp 0.42559419144465 0.836682387256615 0.2709307 0.45083833 prediction 0.67336477451323 Functional Gain - AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:129040181 chr7:129040182 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25041 0 0 1 0 2 chromatin 0.434882139412385 0.438033075353422 0 0 hPsi_site_18765 iPseU_CNN:0;iRNA_PseU:0 18766 chr17 76166923 76166923 1 + G A UCEC 76166922 + 76166902 76166942 41 TCGCCTTGATCGTGTTCTCCTGCATCTATGGTGAGGGCTAC TCGCCTTGATCGTGTTCTCCTACATCTATGGTGAGGGCTAC < 41bp 0.434813807831995 0.836681199059798 0.36375353 0.3700244 prediction 0.673362398119597 Functional Gain - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76166922 chr17:76166923 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_25042 0 0 1 0 1 Ribosome 0.438715942001755 0.438718263867651 0 0 hPsi_site_18766 iPseU_CNN:0;iRNA_PseU:0 18767 chr5 140712522 140712522 1 + C A UCEC 140712521 + 140712501 140712541 41 GCAGACCTATTCCCACGAGGTCTCCCTCACTGCGGACTCGC GCAGACCTATTCCCACGAGGTATCCCTCACTGCGGACTCGC < 41bp 0.484583008531388 0.83668100829261 0.29467535 0.83936006 prediction 0.673362016585221 Functional Gain - PCDHGA1 ENSG00000204956 CDS Human protein_coding chr5:140712521 chr5:140712522 synonymous SNV . 0 22 hPsi_associated_SNPs_25043 0 0 0 0 0 exosome 0.438722184848403 0.438718585380997 0.67872012 0 hPsi_site_18767 iPseU_CNN:0.67872012;iRNA_PseU:0 18768 chr2 182394329 182394329 1 + C A COAD 182394328 + 182394308 182394348 41 TGGAAATAATGGTACCAAATTCTTTTAGCCCCCAAACTGAT TGGAAATAATGGTACCAAATTATTTTAGCCCCCAAACTGAT < 41bp 0.490868574580718 0.836679969907719 0.64148825 0.59973544 prediction 0.673359939815437 Functional Gain - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182394328 chr2:182394329 nonsynonymous SNV 0.968 2 22 hPsi_associated_SNPs_25044 0 0 0 0 2 exosome 0.438718592992737 0.438718592995102 0 0 hPsi_site_18768 iPseU_CNN:0;iRNA_PseU:0 18769 chr2 38978716 38978716 1 + G A rs72909148 38978715 + 38978695 38978735 41 TAAACCTGAGGCCTTCCCCATGCTGTCCCGCCCCCTCCTCT TAAACCTGAGGCCTTCCCCATACTGTCCCGCCCCCTCCTCT < 41bp 0.518384280066885 0.855057748606368 0.29176778 0.684197 prediction 0.673346937078966 Functional Gain - SRSF7 ENSG00000152147 UTR5 Human protein_coding chr2:38978715 chr2:38978716 . . 0 22 hPsi_associated_SNPs_25045 0 0 0 0 0 Ribosome 0.438718290244934 0.438717442133531 0.368394 0 hPsi_site_18769 iPseU_CNN:0.368394;iRNA_PseU:0 18770 chr1 152883971 152883971 1 + G A HNSC 152883970 + 152883950 152883990 41 GCCCACAAAGGGAGAAGTATTGCTTCCTGTAGAGCACCAGC GCCCACAAAGGGAGAAGTATTACTTCCTGTAGAGCACCAGC < 41bp 0.540900331364626 0.877570797706004 0.29300955 0.5643041 prediction 0.673340932682757 Functional Gain - IVL ENSG00000163207 CDS Human protein_coding chr1:152883970 chr1:152883971 synonymous SNV . 0 22 hPsi_associated_SNPs_25046 0 0 0 0 0 unknown 0.43871837116845 0.438717694146126 0.1286082 0 hPsi_site_18770 iPseU_CNN:0.1286082;iRNA_PseU:0 18771 chr4 89363508 89363508 1 + C A COAD 89363507 + 89363487 89363527 41 TCAATAACTTGTCATAATATTCTCTCCCTCCCTAAGTATTC TCAATAACTTGTCATAATATTATCTCCCTCCCTAAGTATTC < 41bp 0.504029219756912 0.840694804587257 0.2153781 0.26934657 prediction 0.673331169660691 Functional Gain - HERC6 ENSG00000138642 CDS Human protein_coding chr4:89363507 chr4:89363508 nonsynonymous SNV 0.109 4 22 hPsi_associated_SNPs_25047 0 0 0 2 0 Cytosol 0.438718588969366 0.438718608919453 0 0 hPsi_site_18771 iPseU_CNN:0;iRNA_PseU:0 18772 chr11 57958817 57958817 1 + G A SKCM 57958816 + 57958796 57958836 41 CACGGTGGTGACCCCAATGCTGAATCCCCTTATCTATAGCC CACGGTGGTGACCCCAATGCTAAATCCCCTTATCTATAGCC < 41bp 0.540792606365962 0.877458102420091 0.30218887 0.4980441 prediction 0.673330992108258 Functional Gain - OR9Q2 ENSG00000186513 CDS Human protein_coding chr11:57958816 chr11:57958817 synonymous SNV . 0 22 hPsi_associated_SNPs_25048 0 0 0 0 0 unknown 0.438720108325943 0.438960534310506 0 0 hPsi_site_18772 iPseU_CNN:0;iRNA_PseU:0 18773 chr14 22133782 22133782 1 + G A SKCM 22133781 + 22133761 22133801 41 CTCACTAGGGCAGACCTTCTTGACTATTCGTCTACCTTACT CTCACTAGGGCAGACCTTCTTAACTATTCGTCTACCTTACT < 41bp 0.449547798781137 0.836663763172736 0.17525637 0.31984645 prediction 0.673327526345473 Functional Gain - OR4E2 ENSG00000221977 CDS Human protein_coding chr14:22133781 chr14:22133782 synonymous SNV . 0 22 hPsi_associated_SNPs_25049 0 0 0 0 0 unknown 0.438718597771377 0.438716879379422 0 0 hPsi_site_18773 iPseU_CNN:0;iRNA_PseU:0 18774 chr11 61131868 61131868 1 + C A UCEC 61131867 + 61131847 61131887 41 AGAAAACAGAAGGAAGATGCTCCAGACCAGTAACTACAGCC AGAAAACAGAAGGAAGATGCTACAGACCAGTAACTACAGCC < 41bp 0.494245048070058 0.836662347481995 0.26529294 0.47703627 prediction 0.67332469496399 Functional Gain - TMEM138 ENSG00000149483 CDS Human protein_coding chr11:61131867 chr11:61131868 synonymous SNV . 0 22 hPsi_associated_SNPs_25050 0 0 1 0 0 Endoplasmic reticulum 0.438718631757759 0.43860086847333 0 0 hPsi_site_18774 iPseU_CNN:0;iRNA_PseU:0 18775 chr22 38323551 38323551 1 + G A ESCA 38323550 + 38323530 38323570 41 GCTTCTGGAGCCGCCAGCTGTGCCCAAGAGCTCCTCAGAGC GCTTCTGGAGCCGCCAGCTGTACCCAAGAGCTCCTCAGAGC < 41bp 0.563331194098853 0.899993387400957 0.32474452 0.8495914 prediction 0.673324386604206 Functional Gain - MICALL1 ENSG00000100139 CDS Human protein_coding chr22:38323550 chr22:38323551 synonymous SNV . 0 22 hPsi_associated_SNPs_25051 0 0 1 0 0 Ribosome 0.438646650586182 0.43871854409714 0.6991828 0 hPsi_site_18775 iPseU_CNN:0.6991828;iRNA_PseU:0 18776 chr16 84488494 84488494 1 + C A UCEC 84488493 + 84488473 84488513 41 ACGACGCAGTGGCCCTGAAGTCTGCAGACATTGGGATCGCC ACGACGCAGTGGCCCTGAAGTATGCAGACATTGGGATCGCC < 41bp 0.532289318781654 0.868949941727669 0.51116633 0.7680954 prediction 0.67332124589203 Functional Gain - ATP2C2 ENSG00000064270 CDS Human protein_coding chr16:84488493 chr16:84488494 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25052 0 0 0 0 2 Ribosome 0.438720012981717 0.437076088027272 0.51385814 0 hPsi_site_18776 iPseU_CNN:0.51385814;iRNA_PseU:0 18777 chr10 47948913 47948913 1 + G A rs587706985 47948912 + 47948892 47948932 41 TGTTGAGTTAGTGATGATGTTGTATATGCTGATGGTCTTAA TGTTGAGTTAGTGATGATGTTATATATGCTGATGGTCTTAA < 41bp 0.476282589475601 0.836656690200225 0.30002052 0.46887627 prediction 0.67331338040045 Functional Gain - ANXA8L1;CTSLP2 ENSG00000152726 UTR3 Human other chr10:47948912 chr10:47948913 . . 0 22 hPsi_associated_SNPs_25053 0 0 0 0 0 unknown 0.438968746976099 0.438239767985479 0 0 hPsi_site_18777 iPseU_CNN:0;iRNA_PseU:0 18778 chr14 89041077 89041077 1 + C A UCEC 89041076 + 89041056 89041096 41 GAAAGTTGCCTGTGGTAAGTTCAGTTGTTAAAGTAAAAAAA GAAAGTTGCCTGTGGTAAGTTAAGTTGTTAAAGTAAAAAAA < 41bp 0.497009415487573 0.836652494681689 0.33678424 0.6657461 prediction 0.673304989363378 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89041076 chr14:89041077 stopgain 1.000 1 22 hPsi_associated_SNPs_25054 0 0 1 0 1 Nucleus 0.439389559944864 0.438939391090801 0.3314922 0 hPsi_site_18778 iPseU_CNN:0.3314922;iRNA_PseU:0 18779 chr1 32669812 32669812 1 + G A UCEC 32669811 + 32669791 32669831 41 GGAATGCTCCTTTGAGCAGCTGGAGCACGTTCGGGAGATGC GGAATGCTCCTTTGAGCAGCTAGAGCACGTTCGGGAGATGC < 41bp 0.432450655536588 0.836648533810879 0.26369905 0.43479985 prediction 0.673297067621759 Functional Gain - CCDC28B ENSG00000160050 CDS Human protein_coding chr1:32669811 chr1:32669812 synonymous SNV . 0 22 hPsi_associated_SNPs_25055 0 0 1 0 1 Ribosome 0.438718704908727 0.43872089011665 0 0 hPsi_site_18779 iPseU_CNN:0;iRNA_PseU:0 18780 chr1 2938312 2938312 1 + G A STAD 2938311 + 2938291 2938331 41 TTGACAATGGCTCGGGGTTCTGCAAAGCGGGCCTGTCTGGG TTGACAATGGCTCGGGGTTCTACAAAGCGGGCCTGTCTGGG < 41bp 0.538446600676479 0.875087149575661 0.2431471 0.67789996 prediction 0.673281097798363 Functional Gain - ACTRT2 ENSG00000169717 CDS Human protein_coding chr1:2938311 chr1:2938312 nonsynonymous SNV 0.175 4 22 hPsi_associated_SNPs_25056 0 0 0 0 0 unknown 0.4387185930988 0.438720482932274 0.35579992 0 hPsi_site_18780 iPseU_CNN:0.35579992;iRNA_PseU:0 18781 chr17 73559139 73559139 1 + G A SKCM 73559138 + 73559118 73559158 41 CCGGCGTGTGTTCGAGATGGTGGAGGCACTGCAGGAGCACC CCGGCGTGTGTTCGAGATGGTAGAGGCACTGCAGGAGCACC < 41bp 0.425265293196803 0.836638254446812 0.36681148 0.8278535 prediction 0.673276508893625 Functional Gain - LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73559138 chr17:73559139 synonymous SNV . 0 22 hPsi_associated_SNPs_25057 0 0 1 0 1 Endoplasmic reticulum 0.438717505130823 0.438718591697447 0.655707 0 hPsi_site_18781 iPseU_CNN:0.655707;iRNA_PseU:0 18782 chr17 26861965 26861965 1 + C A BLCA 26861964 + 26861944 26861984 41 GGCAGACATACTTGCACCTCTCACCAGGCCTGGCCCCTCCT GGCAGACATACTTGCACCTCTAACCAGGCCTGGCCCCTCCT < 41bp 0.466897175301119 0.836636512474629 0.21852762 0.34682453 prediction 0.673273024949259 Functional Gain - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26861964 chr17:26861965 stopgain 0.912 1 22 hPsi_associated_SNPs_25058 0 0 0 0 0 exosome 0.438718592991519 0.438718592994574 0 0 hPsi_site_18782 iPseU_CNN:0;iRNA_PseU:0 18783 chr6 26501966 26501966 1 + G A LUSC 26501965 + 26501945 26501985 41 GGTTTCGCCGGCCGTGCTGGTGCATAGGGACGGGCGCGAGC GGTTTCGCCGGCCGTGCTGGTACATAGGGACGGGCGCGAGC < 41bp 0.553462408777026 0.890096756312984 0.2625587 0.6658021 prediction 0.673268695071914 Functional Gain - BTN1A1 ENSG00000124557 CDS Human protein_coding chr6:26501965 chr6:26501966 synonymous SNV . 0 22 hPsi_associated_SNPs_25059 0 0 0 0 0 nucleoplasm 0.438718592941725 0.438717633474137 0.3316042 0 hPsi_site_18783 iPseU_CNN:0.3316042;iRNA_PseU:0 18784 chr1 212220721 212220721 1 + G A GBM 212220720 + 212220700 212220740 41 GAACATGCAAAGGTCATCAATGCAGCCTCAAGTCAGTTGCC GAACATGCAAAGGTCATCAATACAGCCTCAAGTCAGTTGCC < 41bp 0.429191980112987 0.836630911467591 0.2538351 0.31649494 prediction 0.673261822935182 Functional Gain - DTL ENSG00000143476 CDS Human protein_coding chr1:212220720 chr1:212220721 nonsynonymous SNV 0.963 3 22 hPsi_associated_SNPs_25060 0 0 1 0 2 Cytosol 0.438718390578499 0.438722039793787 0 0 hPsi_site_18784 iPseU_CNN:0;iRNA_PseU:0 18785 chr16 84188293 84188293 1 + G A STAD 84188292 + 84188272 84188312 41 AGGCCCAAACTGAGTTGCGTTGCCTCTTCTTGCAAATGAAC AGGCCCAAACTGAGTTGCGTTACCTCTTCTTGCAAATGAAC < 41bp 0.549334055137403 0.885941043556502 0.22863716 0.34599793 prediction 0.673213976838199 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84188292 chr16:84188293 nonsynonymous SNV 0.975 4 22 hPsi_associated_SNPs_25061 0 0 0 0 0 Cytosol 0.434696598167883 0.437481906783378 0 0 hPsi_site_18785 iPseU_CNN:0;iRNA_PseU:0 18786 chr2 61413769 61413769 1 + G A UCEC 61413768 + 61413748 61413788 41 TTAGAACACTATGCCATGGTTGCACTGAATTTTGTGCCTAC TTAGAACACTATGCCATGGTTACACTGAATTTTGTGCCTAC < 41bp 0.545321324290183 0.881927466546904 0.44234782 0.6612175 prediction 0.673212284513442 Functional Gain - AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413768 chr2:61413769 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_25062 0 0 1 8 1 Nucleus 0.362535656754645 0.420272924880955 0.322435 0 hPsi_site_18786 iPseU_CNN:0.322435;iRNA_PseU:0 18787 chr2 219735840 219735840 1 + G A LAML 219735839 + 219735819 219735859 41 CAGGCCGAGTTGTGCCAGGCTGAGCCGGAAGTGGTGGCAGA CAGGCCGAGTTGTGCCAGGCTAAGCCGGAAGTGGTGGCAGA < 41bp 0.543611412394023 0.880213145393136 0.2402387 0.42944562 prediction 0.673203465998225 Functional Gain - WNT6 ENSG00000115596 CDS Human protein_coding chr2:219735839 chr2:219735840 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25063 0 0 0 0 1 exosome 0.438722435493791 0.438726313353583 0 0 hPsi_site_18787 iPseU_CNN:0;iRNA_PseU:0 18788 chr10 135213089 135213089 1 + C A BLCA 135213088 + 135213068 135213108 41 CAACGTGGGCAAGTCCTCCCTCATCAACTCCCTCCGGAGGC CAACGTGGGCAAGTCCTCCCTAATCAACTCCCTCCGGAGGC < 41bp 0.490593781492745 0.836598997331726 0.19974661 0.24984711 prediction 0.673197994663453 Functional Gain - MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135213088 chr10:135213089 synonymous SNV . 0 22 hPsi_associated_SNPs_25064 0 0 1 0 2 Cytosol 0.438717572845866 0.438718443200604 0 0 hPsi_site_18788 iPseU_CNN:0;iRNA_PseU:0 18789 chr19 35832700 35832700 1 + C A SKCM 35832699 + 35832679 35832719 41 TGTGAGAGCGACGCCAACCCTCCCGTCTCCCACTACACCTG TGTGAGAGCGACGCCAACCCTACCGTCTCCCACTACACCTG < 41bp 0.460403583101819 0.836597793767761 0.21307805 0.25237083 prediction 0.673195587535521 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35832699 chr19:35832700 nonsynonymous SNV 0.585 2 22 hPsi_associated_SNPs_25065 0 0 0 0 1 Endoplasmic reticulum 0.438718584620359 0.438414283601971 0 0 hPsi_site_18789 iPseU_CNN:0;iRNA_PseU:0 18790 chr13 78320789 78320789 1 + C A COAD 78320788 + 78320768 78320808 41 GAGGATGAAGAGGAATTTGATCATTTGCCACCACCTCAGCC GAGGATGAAGAGGAATTTGATAATTTGCCACCACCTCAGCC < 41bp 0.513122567469457 0.849719395871586 0.46784228 0.6416298 prediction 0.673193656804258 Functional Gain - SLAIN1 ENSG00000139737 CDS Human protein_coding chr13:78320788 chr13:78320789 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_25066 0 0 1 0 0 exosome 0.438718607662791 0.438718875790272 0.2832596 0 hPsi_site_18790 iPseU_CNN:0.2832596;iRNA_PseU:0 18791 chr17 686479 686479 1 + C A STAD 686478 + 686458 686498 41 ATACCTAAAGGAGTTGCCAGTCGATAAGCTGAAAGGTGTCA ATACCTAAAGGAGTTGCCAGTAGATAAGCTGAAAGGTGTCA < 41bp 0.493065729882271 0.836593831418846 0.2188642 0.27782273 prediction 0.673187662837693 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:686478 chr17:686479 synonymous SNV . 0 22 hPsi_associated_SNPs_25067 0 0 1 0 1 chromatin 0.438693723094211 0.438732395189581 0 0 hPsi_site_18791 iPseU_CNN:0;iRNA_PseU:0 18792 chr17 74921144 74921144 1 + G A CESC 74921143 + 74921123 74921163 41 CTACCACGGCCTGCAGCAGATGAAGCGGCACATGGGACTCT CTACCACGGCCTGCAGCAGATAAAGCGGCACATGGGACTCT < 41bp 0.420327144097566 0.836591205969785 0.29826167 0.41445434 prediction 0.67318241193957 Functional Gain - MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74921143 chr17:74921144 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25068 0 0 0 0 2 exosome 0.438689170869349 0.438853436919269 0 0 hPsi_site_18792 iPseU_CNN:0;iRNA_PseU:0 18793 chr3 48309438 48309438 1 + C A GBM 48309437 + 48309417 48309457 41 CAGAAGTCCATACCTGCCCTTCTTGCCCTCTGGCCTTTGGC CAGAAGTCCATACCTGCCCTTATTGCCCTCTGGCCTTTGGC < 41bp 0.496768724440296 0.8365846034717 0.33750373 0.438714 prediction 0.6731692069434 Functional Gain - ZNF589 ENSG00000164048 CDS Human protein_coding chr3:48309437 chr3:48309438 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25069 0 0 1 0 2 Cytosol 0.438718590485308 0.438717111731792 0 0 hPsi_site_18793 iPseU_CNN:0;iRNA_PseU:0 18794 chr16 69184491 69184491 1 + C A LUAD 69184490 + 69184470 69184510 41 GAGGGAACAGTCTTCCATTTTCAGCTGGTCCCTGTGACATC GAGGGAACAGTCTTCCATTTTAAGCTGGTCCCTGTGACATC < 41bp 0.471883406806446 0.836580559823618 0.34430808 0.35316664 prediction 0.673161119647236 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69184490 chr16:69184491 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25070 0 0 1 0 1 Cytosol 0.438718540608515 0.438718428485968 0 0 hPsi_site_18794 iPseU_CNN:0;iRNA_PseU:0 18795 chr9 123606030 123606030 1 + G A rs546817121 123606029 + 123606009 123606049 41 AGGCTTCAGTGAGCGGTGATTGTGCCACTGCACTCCAGCCT AGGCTTCAGTGAGCGGTGATTATGCCACTGCACTCCAGCCT < 41bp 0.458783360437203 0.836566472261557 0.31126523 0.49503636 prediction 0.673132944523114 Functional Gain - PSMD5-AS1 ENSG00000226752 ncRNA_intronic Human transcribed_unitary_pseudogene chr9:123606029 chr9:123606030 . . 0 22 hPsi_associated_SNPs_25071 0 0 0 0 0 unknown 0.444562119076126 0.445873390162366 0 0 hPsi_site_18795 iPseU_CNN:0;iRNA_PseU:0 18796 chr9 130486543 130486543 1 + G A COAD 130486542 + 130486522 130486562 41 GACCTACAACGACTTTGCCGTGCACTGCTACAGGCAGGGCG GACCTACAACGACTTTGCCGTACACTGCTACAGGCAGGGCG < 41bp 0.431927768010026 0.83656328581923 0.23143011 0.6452073 prediction 0.67312657163846 Functional Gain - TTC16 ENSG00000167094 CDS Human protein_coding chr9:130486542 chr9:130486543 synonymous SNV . 0 22 hPsi_associated_SNPs_25072 0 0 0 0 0 exosome 0.438710504044262 0.438708389911268 0.2904146 0 hPsi_site_18796 iPseU_CNN:0.2904146;iRNA_PseU:0 18797 chr2 128186467 128186467 1 + G A SKCM 128186466 + 128186446 128186486 41 AAGTCAGCCGCTACCTCGACTGGATCCATGGGCACATCAGA AAGTCAGCCGCTACCTCGACTAGATCCATGGGCACATCAGA < 41bp 0.435471850099878 0.8365557408316 0.27341336 0.5547369 prediction 0.673111481663199 Functional Gain - PROC ENSG00000115718 CDS Human protein_coding chr2:128186466 chr2:128186467 stopgain 0.434 0 22 hPsi_associated_SNPs_25073 0 0 1 0 0 nucleus 0.438849710162764 0.438620438208015 0.1094738 0 hPsi_site_18797 iPseU_CNN:0.1094738;iRNA_PseU:0 18798 chr3 98188928 98188928 1 + G A SKCM 98188927 + 98188907 98188947 41 GTATTTAGGTTAGTTTTCTGTGGATCGAATCACATCAACCA GTATTTAGGTTAGTTTTCTGTAGATCGAATCACATCAACCA < 41bp 0.468270201107289 0.836554154262172 0.19825032 0.4897895 prediction 0.673108308524343 Functional Gain - OR5K1 ENSG00000232382 CDS Human protein_coding chr3:98188927 chr3:98188928 nonsynonymous SNV 0.773 0 22 hPsi_associated_SNPs_25074 0 0 0 0 0 unknown 0.438720716882623 0.441082638496639 0 0 hPsi_site_18798 iPseU_CNN:0;iRNA_PseU:0 18799 chr1 90473035 90473035 1 + C A BLCA 90473034 + 90473014 90473054 41 ATGGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGAC ATGGTGGTCGATTTGAGAGCTACTACCGGAATAGCCTTGAC < 41bp 0.508367045261062 0.84492104650269 0.22388044 0.28448558 prediction 0.673108002483255 Functional Gain - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473034 chr1:90473035 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25075 0 0 1 0 0 Cytosol 0.438713434614331 0.437083846148203 0 0 hPsi_site_18799 iPseU_CNN:0;iRNA_PseU:0 18800 chr16 19278268 19278268 1 + C A HNSC 19278267 + 19278247 19278287 41 TCGTCATTGGCCAGTACTCTTCAGGCCCCTCTGAGACCAAC TCGTCATTGGCCAGTACTCTTAAGGCCCCTCTGAGACCAAC < 41bp 0.519683563542008 0.856235502798706 0.8264153 0.9345938 prediction 0.673103878513394 Functional Gain - SYT17 ENSG00000103528 CDS Human protein_coding chr16:19278267 chr16:19278268 stopgain 0.878 0 22 hPsi_associated_SNPs_25076 0 0 0 0 1 exosome 0.43871859299171 0.438718592995181 0.216357 0 hPsi_site_18800 iPseU_CNN:0.216357;iRNA_PseU:0 18801 chr18 33848580 33848580 1 + G A rs79823152 33848579 + 33848559 33848599 41 GTAGGATCTCAGGTGCTCCCTGTGTTGAAAGAGAATGTGGA GTAGGATCTCAGGTGCTCCCTATGTTGAAAGAGAATGTGGA < 41bp 0.44014399694902 0.836551226598679 0.2298761 0.2391069 prediction 0.673102453197359 Functional Gain - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33848579 chr18:33848580 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_25077 0 0 1 0 1 Ribosome 0.438674751867856 0.438698408304848 0 0 hPsi_site_18801 iPseU_CNN:0;iRNA_PseU:0 18802 chr19 15807242 15807242 1 + C A UCEC 15807241 + 15807221 15807261 41 TTCTTTGTCTCACCTGCAGGTCTACGACCCCTTCCGCTTTG TTCTTTGTCTCACCTGCAGGTATACGACCCCTTCCGCTTTG < 41bp 0.483116775126138 0.83655012246922 0.6061688 0.75242645 prediction 0.67310024493844 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807241 chr19:15807242 synonymous SNV . 0 22 hPsi_associated_SNPs_25078 0 0 1 0 2 exosome 0.438718592995142 0.438718592995071 0.2925153 0 hPsi_site_18802 iPseU_CNN:0.2925153;iRNA_PseU:0 18803 chr5 170216233 170216233 1 + C A UCEC 170216232 + 170216212 170216252 41 ACAGCAGGATATAACAAATTTCTCAGGCCCAATTTTGGTGG ACAGCAGGATATAACAAATTTATCAGGCCCAATTTTGGTGG < 41bp 0.490295467802273 0.836548922515761 0.28065133 0.32073796 prediction 0.673097845031523 Functional Gain - GABRP ENSG00000094755 CDS Human protein_coding chr5:170216232 chr5:170216233 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25079 0 0 0 0 1 Cytosol 0.438774764450048 0.438715381337634 0 0 hPsi_site_18803 iPseU_CNN:0;iRNA_PseU:0 18804 chr18 63530048 63530048 1 + G A LUAD 63530047 + 63530027 63530067 41 ATCCGCGTGTGTGACTGTGATGCTGACGGCGTAGCCCAGAC ATCCGCGTGTGTGACTGTGATACTGACGGCGTAGCCCAGAC < 41bp 0.435661393932227 0.83654621404195 0.34114918 0.6171257 prediction 0.673092428083899 Functional Gain - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63530047 chr18:63530048 nonsynonymous SNV 0.719 0 22 hPsi_associated_SNPs_25080 0 0 0 0 0 exosome 0.438614841729686 0.437816681438628 0.2342514 0 hPsi_site_18804 iPseU_CNN:0.2342514;iRNA_PseU:0 18805 chrX 150348412 150348412 1 + C A LUAD 150348411 + 150348391 150348431 41 GGTCGGCTCCATCTTCAACATCGTGGCAATCGCTATCAACC GGTCGGCTCCATCTTCAACATAGTGGCAATCGCTATCAACC < 41bp 0.505924524806967 0.842470654284598 0.14180121 0.27036905 prediction 0.673092258955263 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150348411 chrX:150348412 synonymous SNV . 0 22 hPsi_associated_SNPs_25081 0 0 0 0 0 exosome 0.438718596392262 0.438718732466752 0 0 hPsi_site_18805 iPseU_CNN:0;iRNA_PseU:0 18806 chr5 176793291 176793291 1 + G A COAD 176793290 + 176793270 176793310 41 TTCCCAACCGAGGAGCAGCCTGTGGCCAGCTGGGCCCTGTC TTCCCAACCGAGGAGCAGCCTATGGCCAGCTGGGCCCTGTC < 41bp 0.428539551853642 0.836542840434829 0.31178093 0.34606606 prediction 0.673085680869658 Functional Gain - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176793290 chr5:176793291 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_25082 0 0 0 0 1 nucleolus 0.438707684479945 0.438718531701023 0 0 hPsi_site_18806 iPseU_CNN:0;iRNA_PseU:0 18807 chr4 57182456 57182456 1 + C A LUSC 57182455 + 57182435 57182475 41 CCTTCCAGCAGCCGCTCTGTTCCTGTGGCCCACCCTGGGCC CCTTCCAGCAGCCGCTCTGTTACTGTGGCCCACCCTGGGCC < 41bp 0.488069910430203 0.836536576643906 0.2378088 0.6064087 prediction 0.673073153287812 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57182455 chr4:57182456 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25083 0 0 1 0 0 cytosol 0.438726985346276 0.438717691193654 0.2128174 0 hPsi_site_18807 iPseU_CNN:0.2128174;iRNA_PseU:0 18808 chr19 58199020 58199020 1 + C A COAD 58199019 + 58198999 58199039 41 TGGGAAATCCTTTAGACAATTCTCTAACCTCATTCGACACC TGGGAAATCCTTTAGACAATTATCTAACCTCATTCGACACC < 41bp 0.509790645640927 0.846322094512127 0.2593102 0.39050567 prediction 0.673062897742401 Functional Gain - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58199019 chr19:58199020 nonsynonymous SNV 0.057 0 22 hPsi_associated_SNPs_25084 0 0 1 0 0 Cytosol 0.438718593006666 0.438717826912858 0 0 hPsi_site_18808 iPseU_CNN:0;iRNA_PseU:0 18809 chr15 63889848 63889848 1 + G A UCEC 63889847 + 63889827 63889867 41 ACTCCAGCCGCGTGCAGGTGTGCAGCATTGAGGACTGGCTC ACTCCAGCCGCGTGCAGGTGTACAGCATTGAGGACTGGCTC < 41bp 0.558972380212115 0.895499792655341 0.26361418 0.29036435 prediction 0.673054824886452 Functional Gain - FBXL22 ENSG00000197361 CDS Human protein_coding chr15:63889847 chr15:63889848 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_25085 0 0 0 0 1 Nucleus 0.439481147915703 0.438803649074011 0 0 hPsi_site_18809 iPseU_CNN:0;iRNA_PseU:0 18810 chr8 11167123 11167123 1 + G A LUSC 11167122 + 11167102 11167142 41 GGACCGATGGCTCAGTAAATTGGAGGCCTCTAACTGGCTGA GGACCGATGGCTCAGTAAATTAGAGGCCTCTAACTGGCTGA < 41bp 0.552005548870495 0.888523655476377 0.56025195 0.74622214 prediction 0.673036213211764 Functional Gain - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11167122 chr8:11167123 synonymous SNV . 0 22 hPsi_associated_SNPs_25086 0 0 1 0 2 Ribosome 0.438681164307882 0.438729897543314 0.37194038 0 hPsi_site_18810 iPseU_CNN:0.37194038;iRNA_PseU:0 18811 chr10 118969605 118969605 1 + G A GBM 118969604 + 118969584 118969624 41 TCGAGAATGCCTTCTATTTCTGCTTTGTCACACTCACCACC TCGAGAATGCCTTCTATTTCTACTTTGTCACACTCACCACC < 41bp 0.553029098170055 0.889545128969229 0.33069962 0.4508494 prediction 0.673032061598348 Functional Gain - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118969604 chr10:118969605 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25087 0 0 0 0 0 unknown 0.438598369043031 0.438763008470236 0 0 hPsi_site_18811 iPseU_CNN:0;iRNA_PseU:0 18812 chr11 4608818 4608818 1 + C A LUAD 4608817 + 4608797 4608837 41 TCAAGGCAGTATTTGGTCTCTCCTCAAAGACTGCTCAGTTG TCAAGGCAGTATTTGGTCTCTACTCAAAGACTGCTCAGTTG < 41bp 0.498478006741294 0.83651538751469 0.18079823 0.4310056 prediction 0.67303077502938 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608817 chr11:4608818 nonsynonymous SNV 0.922 3 22 hPsi_associated_SNPs_25088 0 0 0 0 0 unknown 0.438413051761889 0.438613975659337 0 0 hPsi_site_18812 iPseU_CNN:0;iRNA_PseU:0 18813 chr10 88477871 88477871 1 + G A UCEC 88477870 + 88477850 88477890 41 TGAGCAATTCTTTGCCCCGCTGTGTGCCAAGTGCAACACCA TGAGCAATTCTTTGCCCCGCTATGTGCCAAGTGCAACACCA < 41bp 0.552378675864119 0.888890504736516 0.22031507 0.31372023 prediction 0.673023657744795 Functional Gain - LDB3 ENSG00000122367 CDS Human protein_coding chr10:88477870 chr10:88477871 synonymous SNV . 0 22 hPsi_associated_SNPs_25089 0 0 0 0 1 nucleus 0.440935229531309 0.450448619485584 0 0 hPsi_site_18813 iPseU_CNN:0;iRNA_PseU:0 Glaucoma 18814 chr17 4685850 4685850 1 + G A UCEC 4685849 + 4685829 4685869 41 GGGTGCTTGGTGCCATCTACTGCCTCTCGGTGTCTGGAGCT GGGTGCTTGGTGCCATCTACTACCTCTCGGTGTCTGGAGCT < 41bp 0.424982173962062 0.836505826980266 0.22212633 0.5129632 prediction 0.673011653960532 Functional Gain - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4685849 chr17:4685850 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_25090 0 0 1 0 2 cytosol 0.438684169790896 0.438541473073767 0.0259263999999999 0 hPsi_site_18814 iPseU_CNN:0.0259263999999999;iRNA_PseU:0 18815 chr9 135926322 135926322 1 + G A rs183668839 135926321 + 135926301 135926341 41 CCCAGACGTGGAGGAGAGTCTGCACTAACCCCGTGGACCGG CCCAGACGTGGAGGAGAGTCTACACTAACCCCGTGGACCGG < 41bp 0.56416374121938 0.900667632798179 0.22516769 0.42944306 prediction 0.673007783157598 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926321 chr9:135926322 nonsynonymous SNV 0.200 2 22 hPsi_associated_SNPs_25091 0 0 1 0 0 Ribosome 0.43871859344063 0.438718673190743 0 0 hPsi_site_18815 iPseU_CNN:0;iRNA_PseU:0 18816 chr1 24977914 24977914 1 + C A READ 24977913 + 24977893 24977933 41 ATCCTAGACGCAAATCCAGATCTCCTTCCCCTAGAAGACGA ATCCTAGACGCAAATCCAGATATCCTTCCCCTAGAAGACGA < 41bp 0.517452261771058 0.853952047821192 0.26709688 0.33895212 prediction 0.672999572100268 Functional Gain - SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24977913 chr1:24977914 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25092 0 0 1 0 1 Cytosol 0.438718593199946 0.43871827208365 0 0 hPsi_site_18816 iPseU_CNN:0;iRNA_PseU:0 18817 chr2 233394689 233394689 1 + C A BLCA 233394688 + 233394668 233394708 41 AGTCCACCGGCCGGCCAGGGTCAACGTGGACCCCAGAGCCC AGTCCACCGGCCGGCCAGGGTAAACGTGGACCCCAGAGCCC < 41bp 0.471645976319156 0.836493391368466 0.3212621 0.68328506 prediction 0.672986782736932 Functional Gain - CHRND ENSG00000135902 CDS Human protein_coding chr2:233394688 chr2:233394689 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25093 0 0 0 0 1 unknown 0.43871859297432 0.438718592995102 0.36657012 0 hPsi_site_18817 iPseU_CNN:0.36657012;iRNA_PseU:0 18818 chrX 89177489 89177489 1 + G A LUSC 89177488 + 89177468 89177508 41 AGATGCCCATGCCACCCACCTGCAGAGCACCGAGGCGTCTG AGATGCCCATGCCACCCACCTACAGAGCACCGAGGCGTCTG < 41bp 0.552505587808003 0.888977093992709 0.28513727 0.48038903 prediction 0.672943012369412 Functional Gain - TGIF2LX ENSG00000153779 CDS Human protein_coding chrX:89177488 chrX:89177489 synonymous SNV . 0 22 hPsi_associated_SNPs_25094 0 0 0 0 0 exosome 0.438719935530616 0.438714726879711 0 0 hPsi_site_18818 iPseU_CNN:0;iRNA_PseU:0 18819 chr13 64313481 64313481 1 + G A rs559853776 64313480 + 64313460 64313500 41 CAATCCCCGCCTCGCGGGGGTGCCTCCCCCAGGTGCTATGT CAATCCCCGCCTCGCGGGGGTACCTCCCCCAGGTGCTATGT < 41bp 0.480677250541004 0.83646876991943 0.25527018 0.47967398 prediction 0.67293753983886 Functional Gain - OR7E156P ENSG00000231061;ENSG00000215430 intergenic Human other chr13:64313480 chr13:64313481 . . 0 22 hPsi_associated_SNPs_25095 0 0 0 0 0 unknown 0.438718593018075 0.438718607104022 0 0 hPsi_site_18819 iPseU_CNN:0;iRNA_PseU:0 18820 chr10 133761218 133761218 1 + G A UCEC 133761217 + 133761197 133761237 41 CCACCAGGTCCACGAGTACCTGCGCAGCAAGCTCTGCTCTC CCACCAGGTCCACGAGTACCTACGCAGCAAGCTCTGCTCTC < 41bp 0.566116481872591 0.902581484670845 0.40232754 0.82738733 prediction 0.672930005596508 Functional Gain - PPP2R2D ENSG00000175470 CDS Human protein_coding chr10:133761217 chr10:133761218 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25096 0 0 1 0 1 chromatin 0.43871863153019 0.438717453204531 0.65477466 0 hPsi_site_18820 iPseU_CNN:0.65477466;iRNA_PseU:0 18821 chr9 35043303 35043303 1 + C A COAD 35043302 + 35043282 35043322 41 CTCTGAAGTGGTCTGTTTGTTCTTCTGTCTTCTTCAACAAG CTCTGAAGTGGTCTGTTTGTTATTCTGTCTTCTTCAACAAG < 41bp 0.506885518967143 0.843345612859686 0.6646239 0.7113584 prediction 0.672920187785087 Functional Gain - C9orf131 ENSG00000174038 CDS Human protein_coding chr9:35043302 chr9:35043303 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_25097 0 0 0 0 0 exosome 0.43268986836109 0.438711391285288 0.0934689999999998 0 hPsi_site_18821 iPseU_CNN:0.0934689999999998;iRNA_PseU:0 18822 chr11 290438 290438 1 + G A UCEC 290437 + 290417 290457 41 CCCGCTTCCGGGCCTCCCAGTGCATCTATGCGCATCGCACG CCCGCTTCCGGGCCTCCCAGTACATCTATGCGCATCGCACG < 41bp 0.425377242697913 0.836458487203877 0.3876226 0.89450085 prediction 0.672916974407754 Functional Gain - PGGHG ENSG00000142102 CDS Human protein_coding chr11:290437 chr11:290438 nonsynonymous SNV 0.677 0 22 hPsi_associated_SNPs_25098 0 0 1 0 1 unknown 0.438715505678291 0.438334686412665 0.7890017 0 hPsi_site_18822 iPseU_CNN:0.7890017;iRNA_PseU:0 18823 chr16 4626392 4626392 1 + C A UCEC 4626391 + 4626371 4626411 41 GGGAGCCACAGAATCCCAGATCTTGGGCGATGATTCCGAAA GGGAGCCACAGAATCCCAGATATTGGGCGATGATTCCGAAA < 41bp 0.487347791281825 0.836455897153689 0.3503012 0.47870022 prediction 0.672911794307377 Functional Gain - C16orf96 ENSG00000205832 CDS Human protein_coding chr16:4626391 chr16:4626392 synonymous SNV . 0 22 hPsi_associated_SNPs_25099 0 0 0 0 0 exosome 0.438718667815022 0.438172853559898 0 0 hPsi_site_18823 iPseU_CNN:0;iRNA_PseU:0 18824 chr10 43612112 43612112 1 + C A LUAD 43612111 + 43612091 43612131 41 AGGCGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATC AGGCGAATTTGGAAAAGTGGTAAAGGCAACGGCCTTCCATC < 41bp 0.475953134136917 0.836454264395254 0.28256056 0.81469953 prediction 0.672908528790509 Functional Gain - RET ENSG00000165731 CDS Human protein_coding chr10:43612111 chr10:43612112 synonymous SNV . 0 22 hPsi_associated_SNPs_25100 0 0 0 0 2 Cytosol 0.438495729728298 0.438721290181831 0.62939906 0 hPsi_site_18824 iPseU_CNN:0.62939906;iRNA_PseU:0 18825 chr16 72143385 72143385 1 + G A UCEC 72143384 + 72143364 72143404 41 GGGCCCCATGTTCTATAGCGTGAAACAGGCGGGCAAGTCAC GGGCCCCATGTTCTATAGCGTAAAACAGGCGGGCAAGTCAC < 41bp 0.427421656423884 0.836451303902427 0.39341706 0.66524404 prediction 0.672902607804855 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72143384 chr16:72143385 synonymous SNV . 0 22 hPsi_associated_SNPs_25101 0 0 1 0 2 Cytosol 0.43871281966271 0.438718822898114 0.33048808 0 hPsi_site_18825 iPseU_CNN:0.33048808;iRNA_PseU:0 18826 chr5 140627222 140627222 1 + G A HNSC 140627221 + 140627201 140627241 41 GCTTACCGTCTACCTGGTGGTGGCATTGGCCTCGGTGTCTT GCTTACCGTCTACCTGGTGGTAGCATTGGCCTCGGTGTCTT < 41bp 0.546512267297351 0.882960035413782 0.27594358 0.79301 prediction 0.672895536232862 Functional Gain - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140627221 chr5:140627222 synonymous SNV . 0 22 hPsi_associated_SNPs_25102 0 0 0 0 0 exosome 0.438718518380246 0.438718592102735 0.58602 0 hPsi_site_18826 iPseU_CNN:0.58602;iRNA_PseU:0 18827 chr19 47634245 47634245 1 + G A CESC 47634244 + 47634224 47634264 41 GAGGAGGAGGCGGCACAGTATGACCGGCAGATCCGCCTGTG GAGGAGGAGGCGGCACAGTATAACCGGCAGATCCGCCTGTG < 41bp 0.546606775693789 0.883051764939016 0.34067112 0.5406836 prediction 0.672889978490456 Functional Gain - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47634244 chr19:47634245 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25103 0 0 1 0 1 Ribosome 0.438721325359498 0.438718598139818 0.0813672000000001 0 hPsi_site_18827 iPseU_CNN:0.0813672000000001;iRNA_PseU:0 18828 chr6 109591470 109591470 1 + C A UCEC 109591469 + 109591449 109591489 41 TCTTCCTTCCTTTTTTCCCTTCTCCCTTTCTCCCTTTCTTT TCTTCCTTCCTTTTTTCCCTTATCCCTTTCTCCCTTTCTTT < 41bp 0.499879763720043 0.8364363616521 0.18742585 0.23861203 prediction 0.672872723304201 Functional Gain - C6orf183 ENSG00000243587;ENSG00000233908 intergenic Human other chr6:109591469 chr6:109591470 . . 0 22 hPsi_associated_SNPs_25104 0 0 1 0 0 unknown 0.438718592995102 0.438718592992571 0 0 hPsi_site_18828 iPseU_CNN:0;iRNA_PseU:0 18829 chr1 158063187 158063187 1 + C A SKCM 158063186 + 158063166 158063206 41 CGGCGCGAGCATCCTGCTCATCTTCTTCTTCATCGCCTTGG CGGCGCGAGCATCCTGCTCATATTCTTCTTCATCGCCTTGG < 41bp 0.471938319113148 0.836435384744261 0.3480107 0.67929 prediction 0.672870769488523 Functional Gain - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158063186 chr1:158063187 synonymous SNV . 0 22 hPsi_associated_SNPs_25105 0 0 1 0 2 cytosol 0.438718202141159 0.438710453669269 0.35858 0 hPsi_site_18829 iPseU_CNN:0.35858;iRNA_PseU:0 18830 chr3 9859377 9859377 1 + G A rs73116112 9859376 + 9859356 9859396 41 TTGCCGTGGTTTGATGAGGTTGATGCCAACTCCTTCTTCCC TTGCCGTGGTTTGATGAGGTTAATGCCAACTCCTTCTTCCC < 41bp 0.549910213503427 0.886343258617297 0.7098348 0.8386914 prediction 0.672866090227741 Functional Gain - ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9859376 chr3:9859377 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_25106 0 0 1 0 1 unknown 0.438205179994593 0.43872640713352 0.2577132 0 hPsi_site_18830 iPseU_CNN:0.2577132;iRNA_PseU:0 18831 chr15 43481462 43481462 1 + G A UCEC 43481461 + 43481441 43481481 41 ATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGTA ATTTATTGCAGTGTACTATTTACTTCCAAAGGATCAGGGTA < 41bp 0.441972601949462 0.836427326088149 0.23611924 0.60906124 prediction 0.672854652176299 Functional Gain - CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43481461 chr15:43481462 synonymous SNV . 0 22 hPsi_associated_SNPs_25107 0 0 1 1 1 Cytosol 0.438655056612697 0.438718667130024 0.21812248 0 hPsi_site_18831 iPseU_CNN:0.21812248;iRNA_PseU:0 18832 chr19 19653204 19653204 1 + G A SKCM 19653203 + 19653183 19653223 41 GGGTGCAGCCTTGACACCTGTGAATGCCCGGACCACATCCT GGGTGCAGCCTTGACACCTGTAAATGCCCGGACCACATCCT < 41bp 0.560466299910476 0.896889692167206 0.33870646 0.69044805 prediction 0.672846784513461 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19653203 chr19:19653204 nonsynonymous SNV 0.540 0 22 hPsi_associated_SNPs_25108 0 0 0 0 0 exosome 0.438718591355807 0.43873726222675 0.3808961 0 hPsi_site_18832 iPseU_CNN:0.3808961;iRNA_PseU:0 18833 chr20 43057096 43057096 1 + G A LUSC 43057095 + 43057075 43057115 41 TCACCTCAGCAACGGACAGATGTGTGAGTGGCCCCGACCCA TCACCTCAGCAACGGACAGATATGTGAGTGGCCCCGACCCA < 41bp 0.432304481274022 0.836420333473522 0.30855146 0.59149957 prediction 0.672840666947045 Functional Gain - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43057095 chr20:43057096 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25109 0 0 1 0 2 Ribosome 0.438712312112817 0.438712520893421 0.18299914 0 hPsi_site_18833 iPseU_CNN:0.18299914;iRNA_PseU:0 18834 chr11 58893162 58893162 1 + C A UCEC 58893161 + 58893141 58893181 41 CTACTCCTGACAATTGGTTTTCCATTGAGCCATGGCTTAAA CTACTCCTGACAATTGGTTTTACATTGAGCCATGGCTTAAA < 41bp 0.498935572019522 0.836418175476129 0.30966008 0.5639032 prediction 0.672836350952257 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58893161 chr11:58893162 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25110 0 0 1 0 0 Cytosol 0.438718597843787 0.438718073335549 0.1278064 0 hPsi_site_18834 iPseU_CNN:0.1278064;iRNA_PseU:0 18835 chr9 4585406 4585406 1 + G A LIHC 4585405 + 4585385 4585425 41 AAGGAGCTGGAGCAGATGGATGTTTCATCTGAAGTCAACAT AAGGAGCTGGAGCAGATGGATATTTCATCTGAAGTCAACAT < 41bp 0.455044572815543 0.836416774474746 0.6307655 0.74403834 prediction 0.672833548949493 Functional Gain - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585405 chr9:4585406 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25111 0 0 1 0 1 chromatin 0.438570916281525 0.43869710720171 0.22654568 0 hPsi_site_18835 iPseU_CNN:0.22654568;iRNA_PseU:0 18836 chr9 35560085 35560085 1 + C A UCEC 35560084 + 35560064 35560104 41 AGTGCAGCTCATACCGTGTGTCCCGGCCTCTTTGAAGAGCT AGTGCAGCTCATACCGTGTGTACCGGCCTCTTTGAAGAGCT < 41bp 0.522219612716079 0.858635311444336 0.22756928 0.38221845 prediction 0.672831397456515 Functional Gain - RUSC2 ENSG00000198853 CDS Human protein_coding chr9:35560084 chr9:35560085 nonsynonymous SNV 0.216 1 22 hPsi_associated_SNPs_25112 0 0 0 0 1 Cytosol 0.438954646057528 0.434726291991717 0 0 hPsi_site_18836 iPseU_CNN:0;iRNA_PseU:0 18837 chr17 7162104 7162104 1 + C A UCEC 7162103 + 7162083 7162123 41 TTGGGGGTGGGGTCAGGGATTCTAGGGATGGGGCAGAGTGG TTGGGGGTGGGGTCAGGGATTATAGGGATGGGGCAGAGTGG < 41bp 0.501487155154438 0.837887874252937 0.2777921 0.33870107 prediction 0.672801438196997 Functional Gain - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162103 chr17:7162104 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_25113 0 0 1 0 0 Cytosol 0.43870871356283 0.438867980973406 0 0 hPsi_site_18837 iPseU_CNN:0;iRNA_PseU:0 18838 chr11 11962039 11962039 1 + C A UCEC 11962038 + 11962018 11962058 41 CGCTGCTACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAA CGCTGCTACAATGATTTGCGTATTCTCAGTGTCTCCAGTAA < 41bp 0.480432572148113 0.836395336599545 0.3045251 0.4043207 prediction 0.672790673199091 Functional Gain - USP47 ENSG00000170242 CDS Human protein_coding chr11:11962038 chr11:11962039 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25114 0 0 1 0 2 Nucleus 0.438718594420725 0.438718592849609 0 0 hPsi_site_18838 iPseU_CNN:0;iRNA_PseU:0 18839 chr4 7780537 7780537 1 + G A UCEC 7780536 + 7780516 7780556 41 CGGGATCCGCTTTCTTTGGCTGACTGCTCAGAGTCTTCCCT CGGGATCCGCTTTCTTTGGCTAACTGCTCAGAGTCTTCCCT < 41bp 0.540753842875997 0.877144778187395 0.29547268 0.7441741 prediction 0.672781870622795 Functional Gain - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7780536 chr4:7780537 stopgain 0.104 0 22 hPsi_associated_SNPs_25115 0 0 1 0 0 Ribosome 0.438715351767781 0.438718617304088 0.4883482 0 hPsi_site_18839 iPseU_CNN:0.4883482;iRNA_PseU:0 18840 chr17 32964315 32964315 1 + G A PRAD 32964314 + 32964294 32964334 41 GGATGAGCATGTGGCCACTGTGACCCAGGACCGGGCCTTCC GGATGAGCATGTGGCCACTGTAACCCAGGACCGGGCCTTCC < 41bp 0.429255337699574 0.836388662121491 0.2379201 0.5669502 prediction 0.672777324242982 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32964314 chr17:32964315 synonymous SNV . 0 22 hPsi_associated_SNPs_25116 0 0 0 0 0 exosome 0.438718281897197 0.438735654672613 0.1339004 0 hPsi_site_18840 iPseU_CNN:0.1339004;iRNA_PseU:0 18841 chr3 32806235 32806235 1 + G A COAD 32806234 + 32806214 32806254 41 CTCTGCCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTT CTCTGCCAGGACTGTGATGCTATTCAACCTTGGCAGCGCTT < 41bp 0.429022442211876 0.836386486201575 0.36516768 0.69106686 prediction 0.672772972403149 Functional Gain - CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32806234 chr3:32806235 synonymous SNV . 0 22 hPsi_associated_SNPs_25117 0 0 1 0 2 Endoplasmic reticulum 0.439580054133905 0.438717749606985 0.38213372 0 hPsi_site_18841 iPseU_CNN:0.38213372;iRNA_PseU:0 18842 chr1 36372581 36372581 1 + G A BRCA 36372580 + 36372560 36372600 41 GATTTCCAAGGATGCGGGGATGCCTATCCAGGGTCAACCTT GATTTCCAAGGATGCGGGGATACCTATCCAGGGTCAACCTT < 41bp 0.558194329509671 0.894574116323363 0.25913784 0.3135542 prediction 0.672759573627385 Functional Gain - AGO1 ENSG00000092847 CDS Human protein_coding chr1:36372580 chr1:36372581 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25118 0 0 1 1 1 Cytosol 0.438718615144775 0.438718581180286 0 0 hPsi_site_18842 iPseU_CNN:0;iRNA_PseU:0 18843 chr3 142511750 142511750 1 + C A GBM 142511749 + 142511729 142511769 41 CTTTTTGCATTTGCAAATGTTCTAAGTTATCTTCGTCTCTT CTTTTTGCATTTGCAAATGTTATAAGTTATCTTCGTCTCTT < 41bp 0.499643119519905 0.836375822693914 0.39257193 0.3390798 prediction 0.672751645387829 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142511749 chr3:142511750 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25119 0 0 0 0 2 Ribosome 0.438718012330537 0.438718262186984 0 0 hPsi_site_18843 iPseU_CNN:0;iRNA_PseU:0 18844 chr18 56601746 56601746 1 + C A BLCA 56601745 + 56601725 56601765 41 AGAATCCATCAGCACAAATCTCCCTACACCTGCCCTGAGTG AGAATCCATCAGCACAAATCTACCTACACCTGCCCTGAGTG < 41bp 0.470535475528007 0.836375772837913 0.28092012 0.5045692 prediction 0.672751545675826 Functional Gain - ZNF532 ENSG00000074657 CDS Human protein_coding chr18:56601745 chr18:56601746 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25120 0 0 0 0 1 Cytosol 0.438736253916875 0.438773451263732 0.0091384000000001 0 hPsi_site_18844 iPseU_CNN:0.0091384000000001;iRNA_PseU:0 18845 chr3 122825637 122825637 1 + G A UCEC 122825636 + 122825616 122825656 41 GGATCCAAAAGGGCCCCCACTGTGGGAGGAAGATCCTGGAG GGATCCAAAAGGGCCCCCACTATGGGAGGAAGATCCTGGAG < 41bp 0.423053617412057 0.836373345327563 0.31001765 0.27355817 prediction 0.672746690655125 Functional Gain - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122825636 chr3:122825637 synonymous SNV . 0 22 hPsi_associated_SNPs_25121 0 0 1 1 2 Endoplasmic reticulum 0.438720595623697 0.438718364499383 0 0 hPsi_site_18845 iPseU_CNN:0;iRNA_PseU:0 18846 chrX 99920638 99920638 1 + C A STAD 99920637 + 99920617 99920657 41 CAACCGGGCCAGCTGCAAGTTCATTGTGAAAGTACAAGGTC CAACCGGGCCAGCTGCAAGTTAATTGTGAAAGTACAAGGTC < 41bp 0.527478819834802 0.863851171090925 0.20637843 0.6300726 prediction 0.672744702512246 Functional Gain - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99920637 chrX:99920638 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25122 0 0 0 0 1 nucleus 0.438715123281502 0.438718044898753 0.2601452 0 hPsi_site_18846 iPseU_CNN:0.2601452;iRNA_PseU:0 18847 chr11 124951781 124951781 1 + C A UCEC 124951780 + 124951760 124951800 41 AGAGCCTGCTGCCATCAGCTTCTTTGGGGCGCTCCGGATCC AGAGCCTGCTGCCATCAGCTTATTTGGGGCGCTCCGGATCC < 41bp 0.468188072923394 0.836368489271137 0.7171621 0.71940225 prediction 0.672736978542274 Functional Gain - SLC37A2 ENSG00000134955 CDS Human protein_coding chr11:124951780 chr11:124951781 nonsynonymous SNV 0.899 1 22 hPsi_associated_SNPs_25123 0 0 0 0 1 nucleolus 0.438718592995102 0.438718593498434 0.00448029999999999 0 hPsi_site_18847 iPseU_CNN:0.00448029999999999;iRNA_PseU:0 18848 chr22 18566338 18566338 1 + G A SKCM 18566337 + 18566317 18566357 41 TCACGTGCAGCGGGTGCTGCTGCCTCTGGGCTGCTTATCGG TCACGTGCAGCGGGTGCTGCTACCTCTGGGCTGCTTATCGG < 41bp 0.413144903239337 0.836362127831319 0.2428276 0.35283825 prediction 0.672724255662639 Functional Gain - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18566337 chr22:18566338 synonymous SNV . 0 22 hPsi_associated_SNPs_25124 0 0 1 0 0 Ribosome 0.438722158210657 0.4386812246418 0 0 hPsi_site_18848 iPseU_CNN:0;iRNA_PseU:0 18849 chr7 94184854 94184854 1 + C A STAD 94184853 + 94184833 94184873 41 GGCAGCGGACACAAGGGGTATCTTGGTACTGATACCTGGAA GGCAGCGGACACAAGGGGTATATTGGTACTGATACCTGGAA < 41bp 0.509966778994927 0.846326609524445 0.27452746 0.36461818 prediction 0.672719661059037 Functional Gain - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94184853 chr7:94184854 synonymous SNV . 0 22 hPsi_associated_SNPs_25125 0 0 1 0 1 Cytosol 0.438718592845338 0.438718592995097 0 0 hPsi_site_18849 iPseU_CNN:0;iRNA_PseU:0 18850 chr11 65482325 65482325 1 + G A HNSC 65482324 + 65482304 65482344 41 CTACGACATCCTCCAGGCAATGAGATTTACCGCAAGGGCAC CTACGACATCCTCCAGGCAATAAGATTTACCGCAAGGGCAC < 41bp 0.426895005279065 0.836357311431153 0.2527778 0.27498847 prediction 0.672714622862306 Functional Gain - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65482324 chr11:65482325 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_25126 0 0 1 0 2 Cytosol 0.438711650814922 0.438708480263454 0 0 hPsi_site_18850 iPseU_CNN:0;iRNA_PseU:0 18851 chr10 105038013 105038013 1 + G A SARC 105038012 + 105037992 105038032 41 GAGCTGGAGGAGCGGCACAGTGCCGAGGTAGCTGGCTACCA GAGCTGGAGGAGCGGCACAGTACCGAGGTAGCTGGCTACCA < 41bp 0.43827797976957 0.836354797182876 0.34494096 0.74646986 prediction 0.672709594365752 Functional Gain - INA ENSG00000148798 CDS Human protein_coding chr10:105038012 chr10:105038013 nonsynonymous SNV 0.954 3 22 hPsi_associated_SNPs_25127 0 0 0 0 1 exosome 0.440667105244534 0.4397824778844 0.49293972 0 hPsi_site_18851 iPseU_CNN:0.49293972;iRNA_PseU:0 18852 chr9 138012708 138012708 1 + G A rs188788939 138012707 + 138012687 138012727 41 TCAGTTTATGCGATGATTGTTGTAAATGCAATGCCGTAGTT TCAGTTTATGCGATGATTGTTATAAATGCAATGCCGTAGTT < 41bp 0.50527627918756 0.841628937751244 0.3988307 0.6634264 prediction 0.672705317127367 Functional Gain - OLFM1 ENSG00000130558 UTR3 Human protein_coding chr9:138012707 chr9:138012708 . . 0 22 hPsi_associated_SNPs_25128 0 0 1 0 0 Endoplasmic reticulum 0.438706454356624 0.438718314465211 0.3268528 0 hPsi_site_18852 iPseU_CNN:0.3268528;iRNA_PseU:0 18853 chr15 65157334 65157334 1 + C A UCEC 65157333 + 65157313 65157353 41 TGTCTCAGCAAGCTCTGAGGTCTCCCCTGAGAGCCAAGAGG TGTCTCAGCAAGCTCTGAGGTATCCCCTGAGAGCCAAGAGG < 41bp 0.502997463729766 0.839344740661693 0.30503663 0.6072686 prediction 0.672694553863854 Functional Gain - PLEKHO2 ENSG00000241839 CDS Human protein_coding chr15:65157333 chr15:65157334 synonymous SNV . 0 22 hPsi_associated_SNPs_25129 0 0 0 0 0 chromatin 0.438718592995102 0.438718592995007 0.2145372 0 hPsi_site_18853 iPseU_CNN:0.2145372;iRNA_PseU:0 18854 chr6 3154828 3154828 1 + C T BLCA 3154829 - 3154809 3154849 41 ACAGATGAAACCTACTCCATTGATAACGAGGCCCTGTATGA ACAGATGAAACCTACTCCATTAATAACGAGGCCCTGTATGA < 41bp 0.555357484466608 0.891703964747908 0.260041 0.26886466 prediction 0.6726929605626 Functional Gain - TUBB2A ENSG00000137267 CDS Human protein_coding chr6:3154829 chr6:3154828 nonsynonymous SNV 0.085 2 22 hPsi_associated_SNPs_25130 0 0 1 0 0 Ribosome 0.438718594462305 0.438718592989083 0 0 hPsi_site_18854 iPseU_CNN:0;iRNA_PseU:0 18855 chr14 75904629 75904629 1 + G A LUSC 75904628 + 75904608 75904648 41 TGCCACTCCTCCTGCTATGATGCCTGGGCAGATCCCGGACC TGCCACTCCTCCTGCTATGATACCTGGGCAGATCCCGGACC < 41bp 0.428484327526266 0.836343085137619 0.27801067 0.39651763 prediction 0.672686170275239 Functional Gain - JDP2 ENSG00000140044 CDS Human protein_coding chr14:75904628 chr14:75904629 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25131 0 0 1 0 1 Ribosome 0.438718592905987 0.438718592935167 0 0 hPsi_site_18855 iPseU_CNN:0;iRNA_PseU:0 18856 chr8 21960368 21960368 1 + G A LIHC 21960367 + 21960347 21960387 41 GAGTTCTGCAAGGAGCTGGCTGCCATTGCCTTCGTCAAGTT GAGTTCTGCAAGGAGCTGGCTACCATTGCCTTCGTCAAGTT < 41bp 0.55359255369542 0.889929489452144 0.22182795 0.37811714 prediction 0.672673871513448 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21960367 chr8:21960368 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25132 0 0 0 0 1 chromatin 0.444068634742659 0.459965547161079 0 0 hPsi_site_18856 iPseU_CNN:0;iRNA_PseU:0 18857 chr4 100530053 100530053 1 + C A UCEC 100530052 + 100530032 100530072 41 ACGTCAAGAACATCCTGCTGTCTATTGGGGAGCTTCCCCAA ACGTCAAGAACATCCTGCTGTATATTGGGGAGCTTCCCCAA < 41bp 0.476454603577222 0.836335809774939 0.23910257 0.2708705 prediction 0.672671619549879 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100530052 chr4:100530053 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_25133 0 0 1 0 1 cytosol 0.43861366322721 0.43871861466322 0 0 hPsi_site_18857 iPseU_CNN:0;iRNA_PseU:0 18858 chr5 7873519 7873519 1 + G A UCEC 7873518 + 7873498 7873538 41 ACCGAAACAGCTCCTCTTGTTGTTGTGGTTTCTACCACGGG ACCGAAACAGCTCCTCTTGTTATTGTGGTTTCTACCACGGG < 41bp 0.441873775048524 0.836333194120181 0.39712447 0.5821226 prediction 0.672666388240362 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7873518 chr5:7873519 nonsynonymous SNV 0.794 0 22 hPsi_associated_SNPs_25134 0 0 1 0 1 Nucleus 0.4383033983043 0.438462481558501 0.1642452 0 hPsi_site_18858 iPseU_CNN:0.1642452;iRNA_PseU:0 18859 chr3 57743521 57743521 1 + G A THYM 57743520 + 57743500 57743540 41 AGAATAATGCCACTTTTGATTGCAAAGTGCTATCAAGGAAC AGAATAATGCCACTTTTGATTACAAAGTGCTATCAAGGAAC < 41bp 0.471037592091839 0.83631306141511 0.30539677 0.73116183 prediction 0.672626122830221 Functional Gain - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57743520 chr3:57743521 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25135 0 0 1 0 1 Ribosome 0.438657901068165 0.437893527799138 0.46232366 0 hPsi_site_18859 iPseU_CNN:0.46232366;iRNA_PseU:0 18860 chr7 37936515 37936515 1 + G A UCEC 37936514 + 37936494 37936534 41 CTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGAT CTGACCAAGTGGAATGCTGTTACAGAATGGAGACGATTGAT < 41bp 0.437095268268075 0.836313053108056 0.3286723 0.54969484 prediction 0.672626106216112 Functional Gain - NME8 ENSG00000086288 CDS Human protein_coding chr7:37936514 chr7:37936515 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25136 0 0 0 0 1 exosome 0.438864422940399 0.438864474771347 0.09938968 0 hPsi_site_18860 iPseU_CNN:0.09938968;iRNA_PseU:0 18861 chr7 100552270 100552270 1 + G A SKCM 100552269 + 100552249 100552289 41 TCTCCCACTGATCCATGTGTTGAAATGGATCCCAGCACTGA TCTCCCACTGATCCATGTGTTAAAATGGATCCCAGCACTGA < 41bp 0.540329648363489 0.876640652314859 0.2674566 0.517495 prediction 0.67262200790274 Functional Gain - MUC3A ENSG00000169894 CDS Human protein_coding chr7:100552269 chr7:100552270 nonsynonymous SNV 0.137 0 22 hPsi_associated_SNPs_25137 0 0 0 0 0 exosome 0.438718345598905 0.438785682803963 0.0349900000000001 0 hPsi_site_18861 iPseU_CNN:0.0349900000000001;iRNA_PseU:0 18862 chr16 53493431 53493431 1 + G A STAD 53493430 + 53493410 53493450 41 TAAGGAGAATAGCCCTTGTGTGACTCCAGTTTCTACAGCTA TAAGGAGAATAGCCCTTGTGTAACTCCAGTTTCTACAGCTA < 41bp 0.424352732242323 0.836306425568438 0.27517664 0.2861427 prediction 0.672612851136877 Functional Gain - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53493430 chr16:53493431 synonymous SNV . 0 22 hPsi_associated_SNPs_25138 0 0 1 0 2 Ribosome 0.438709295056798 0.438712993802395 0 0 hPsi_site_18862 iPseU_CNN:0;iRNA_PseU:0 18863 chr8 28608327 28608327 1 + G A UCEC 28608326 + 28608306 28608346 41 ACGCAGTTCAGGGTGGATTCTGTGCTCTTCAAGACACGCCT ACGCAGTTCAGGGTGGATTCTATGCTCTTCAAGACACGCCT < 41bp 0.442945942249769 0.836305897134067 0.27083567 0.3590911 prediction 0.672611794268135 Functional Gain - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28608326 chr8:28608327 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25139 0 0 1 0 0 Endoplasmic reticulum 0.438958711237343 0.438100476715356 0 0 hPsi_site_18863 iPseU_CNN:0;iRNA_PseU:0 18864 chr22 20074180 20074180 1 + G A SKCM 20074179 + 20074159 20074199 41 GTTCAGAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCCC GTTCAGAGAGACAGAGTGGATAAAGAGGCCTTGAATTTCCC < 41bp 0.555860579072385 0.89216581749558 0.19397464 0.23784378 prediction 0.67261047684639 Functional Gain - DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20074179 chr22:20074180 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_25140 0 0 1 0 1 Nucleus 0.438718451008189 0.438710705131725 0 0 hPsi_site_18864 iPseU_CNN:0;iRNA_PseU:0 18865 chr19 41066206 41066206 1 + G A BLCA 41066205 + 41066185 41066225 41 TGTGAGGATGCCCGCCTGCATGTCAGCTCCACAGCCGACGC TGTGAGGATGCCCGCCTGCATATCAGCTCCACAGCCGACGC < 41bp 0.444756710636897 0.836302262234093 0.48850396 0.7081348 prediction 0.672604524468186 Functional Gain - SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41066205 chr19:41066206 nonsynonymous SNV 0.716 0 22 hPsi_associated_SNPs_25141 0 0 0 0 0 cytosol 0.437286574288483 0.442733610587101 0.4162696 0 hPsi_site_18865 iPseU_CNN:0.4162696;iRNA_PseU:0 18866 chr11 48267148 48267148 1 + G A LUAD 48267147 + 48267127 48267167 41 CTGCTCTTCTGTGGCCCCAATGTGATCAATCACTATTTCTG CTGCTCTTCTGTGGCCCCAATATGATCAATCACTATTTCTG < 41bp 0.455569766709169 0.836289477683486 0.30272734 0.32689708 prediction 0.672578955366973 Functional Gain - OR4X2 ENSG00000172208 CDS Human polymorphic_pseudogene chr11:48267147 chr11:48267148 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_25142 0 0 0 0 0 unknown 0.438760908833111 0.438717892620242 0 0 hPsi_site_18866 iPseU_CNN:0;iRNA_PseU:0 18867 chr12 132335615 132335615 1 + G A ESCA 132335614 + 132335594 132335634 41 TGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCCCC TGGATCTGTGGCTGCGGGCGTAGACGCGGCAGAGGGGCCCC < 41bp 0.546363247560921 0.882650009687218 0.25928384 0.67168725 prediction 0.672573524252596 Functional Gain - MMP17 ENSG00000198598 CDS Human protein_coding chr12:132335614 chr12:132335615 synonymous SNV . 0 22 hPsi_associated_SNPs_25143 0 0 1 0 0 Cytosol 0.438718506765347 0.438794336175467 0.3433745 0 hPsi_site_18867 iPseU_CNN:0.3433745;iRNA_PseU:0 18868 chrX 69457032 69457032 1 + C A UCEC 69457031 + 69457011 69457051 41 AAGACCTTCCCAGGCATCACTCCTCACTTGGCCACGCTGTC AAGACCTTCCCAGGCATCACTACTCACTTGGCCACGCTGTC < 41bp 0.474297603994636 0.836282609007758 0.15776324 0.22486296 prediction 0.672565218015517 Functional Gain - AWAT1 ENSG00000204195 CDS Human protein_coding chrX:69457031 chrX:69457032 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_25144 0 0 0 0 1 unknown 0.438718584476663 0.438723231877307 0 0 hPsi_site_18868 iPseU_CNN:0;iRNA_PseU:0 18869 chr6 41197802 41197802 1 + C A rs143797843 41197801 + 41197781 41197821 41 TTCTTTGTGTCCTCTTTAGTTCTGATCACTTCTCCAGAGGG TTCTTTGTGTCCTCTTTAGTTATGATCACTTCTCCAGAGGG < 41bp 0.496529208493841 0.836268970914037 0.43347704 0.624745 prediction 0.672537941828075 Functional Gain - TREML4 ENSG00000188056 CDS Human protein_coding chr6:41197801 chr6:41197802 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_25145 0 0 0 0 2 exosome 0.438718592581814 0.438718597706445 0.24949 0 hPsi_site_18869 iPseU_CNN:0.24949;iRNA_PseU:0 18870 chr17 77707408 77707408 1 + G A BLCA 77707407 + 77707387 77707427 41 CGCTGGGCATCCAGAGGTGGTGGGACAACGGCAGCGTGCCC CGCTGGGCATCCAGAGGTGGTAGGACAACGGCAGCGTGCCC < 41bp 0.424878490034867 0.836264482997769 0.22785011 0.60288775 prediction 0.672528965995538 Functional Gain - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77707407 chr17:77707408 stopgain 1.000 1 22 hPsi_associated_SNPs_25146 0 0 0 0 1 exosome 0.438718446837127 0.438718579915482 0.2057755 0 hPsi_site_18870 iPseU_CNN:0.2057755;iRNA_PseU:0 18871 chr15 40558431 40558431 1 + G A rs144246288 40558430 + 40558410 40558450 41 GCTGTCTGCAGCTGGGTGCCTGCCTGCAGAGCTCCCCACCA GCTGTCTGCAGCTGGGTGCCTACCTGCAGAGCTCCCCACCA < 41bp 0.429711754431129 0.836263821080844 0.20737997 0.48706123 prediction 0.672527642161688 Functional Gain - BUB1B-PAK6;PAK6 ENSG00000137843 CDS Human protein_coding chr15:40558430 chr15:40558431 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25147 0 0 0 0 0 unknown 0.438719252212223 0.438715546586115 0 0 hPsi_site_18871 iPseU_CNN:0;iRNA_PseU:0 18872 chr19 47503810 47503810 1 + G A GBM 47503809 + 47503789 47503829 41 GCCCAGCTCCCCCTCTGCCGTGGCTTCCACCGTCCCCTTCC GCCCAGCTCCCCCTCTGCCGTAGCTTCCACCGTCCCCTTCC < 41bp 0.442307862440394 0.836261604128564 0.32353187 0.6978967 prediction 0.672523208257129 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47503809 chr19:47503810 synonymous SNV . 0 22 hPsi_associated_SNPs_25148 0 0 1 0 0 Ribosome 0.438718597569936 0.438718935775359 0.3957934 0 hPsi_site_18872 iPseU_CNN:0.3957934;iRNA_PseU:0 18873 chr11 3838674 3838674 1 + G A COAD 3838673 + 3838653 3838693 41 GCTTCACAGCCATGGTCTGGTGGGCCATCACTTTTCCTGTG GCTTCACAGCCATGGTCTGGTAGGCCATCACTTTTCCTGTG < 41bp 0.528917693178168 0.865175117253042 0.19470665 0.34405673 prediction 0.672514848149749 Functional Gain - PGAP2 ENSG00000148985 CDS Human protein_coding chr11:3838673 chr11:3838674 stopgain 1.000 0 22 hPsi_associated_SNPs_25149 0 0 1 0 2 Ribosome 0.438739772010402 0.438320539945033 0 0 hPsi_site_18873 iPseU_CNN:0;iRNA_PseU:0 18874 chr22 39482482 39482482 1 + G A STAD 39482481 + 39482461 39482501 41 GTGAGCCTGTGCATCTTCACTGCCCGCATCTATGATGATCA GTGAGCCTGTGCATCTTCACTACCCGCATCTATGATGATCA < 41bp 0.432515530303019 0.836255169325867 0.21264118 0.32050243 prediction 0.672510338651733 Functional Gain - APOBEC3G ENSG00000239713 CDS Human protein_coding chr22:39482481 chr22:39482482 nonsynonymous SNV 0.021 3 22 hPsi_associated_SNPs_25150 0 0 0 0 1 Cytosol 0.430000884702123 0.429640267463192 0 0 hPsi_site_18874 iPseU_CNN:0;iRNA_PseU:0 18875 chr19 7682472 7682472 1 + C A UCEC 7682471 + 7682451 7682491 41 CAGCGCCAAGTCCAACAAGTTCATCATCCACAATGCCCTAT CAGCGCCAAGTCCAACAAGTTAATCATCCACAATGCCCTAT < 41bp 0.517265189376104 0.853518394915047 0.5835401 0.8579416 prediction 0.672506411077887 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7682471 chr19:7682472 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25151 0 0 0 0 2 nucleus 0.438753238947493 0.438659811982829 0.548803 0 hPsi_site_18875 iPseU_CNN:0.548803;iRNA_PseU:0 18876 chr12 52635261 52635261 1 + G A COAD 52635260 + 52635240 52635280 41 CGTCTGGTCCCTACAGGAGTTGACAGAGCTGCAGTCCCAGA CGTCTGGTCCCTACAGGAGTTAACAGAGCTGCAGTCCCAGA < 41bp 0.426970801036426 0.836251365829935 0.24567947 0.33977613 prediction 0.67250273165987 Functional Gain - KRT7 ENSG00000135480 CDS Human protein_coding chr12:52635260 chr12:52635261 synonymous SNV . 0 22 hPsi_associated_SNPs_25152 0 0 0 0 1 Cytosol 0.425787218889693 0.438670564916245 0 0 hPsi_site_18876 iPseU_CNN:0;iRNA_PseU:0 18877 chr4 170616794 170616794 1 + C A COAD 170616793 + 170616773 170616813 41 CTGCCTCAGCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCA CTGCCTCAGCTGCAGGGGTTTATGTAGCTTTTGGTGCACCA < 41bp 0.511332186503482 0.847583334916143 0.3610683 0.56114376 prediction 0.672502296825323 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170616793 chr4:170616794 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_25153 0 0 1 0 2 Ribosome 0.438729237252939 0.427948804352153 0.12228752 0 hPsi_site_18877 iPseU_CNN:0.12228752;iRNA_PseU:0 18878 chr9 139311566 139311566 1 + G A BLCA 139311565 + 139311545 139311585 41 AGCACGAGCATCTGGTGGACTGTGCCCGGAAGTACCTCCTG AGCACGAGCATCTGGTGGACTATGCCCGGAAGTACCTCCTG < 41bp 0.443705361619795 0.836248911737049 0.47049823 0.82485104 prediction 0.672497823474098 Functional Gain - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139311565 chr9:139311566 nonsynonymous SNV 0.878 1 22 hPsi_associated_SNPs_25154 0 0 1 0 0 Cytosol 0.438721846752025 0.438725496549875 0.64970208 0 hPsi_site_18878 iPseU_CNN:0.64970208;iRNA_PseU:0 18879 chr15 81601016 81601016 1 + G A UCEC 81601015 + 81600995 81601035 41 ACAGCTGGGTGGCACTGCCATGCAGGGCCTCACACGGTTTG ACAGCTGGGTGGCACTGCCATACAGGGCCTCACACGGTTTG < 41bp 0.54677380085896 0.883020570799855 0.3440048 0.725044 prediction 0.672493539881789 Functional Gain - IL16 ENSG00000172349 CDS Human protein_coding chr15:81601015 chr15:81601016 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_25155 0 0 0 0 1 Nucleus 0.438718590605965 0.438718577495047 0.450088 0 hPsi_site_18879 iPseU_CNN:0.450088;iRNA_PseU:0 18880 chr6 52268609 52268609 1 + C A BLCA 52268608 + 52268588 52268628 41 GGCTGTTGCTATGCCAAATATCGTTACCGGAGGCCTTATCC GGCTGTTGCTATGCCAAATATAGTTACCGGAGGCCTTATCC < 41bp 0.491637302880263 0.83623825593701 0.25942996 0.3870548 prediction 0.67247651187402 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268608 chr6:52268609 nonsynonymous SNV 0.971 1 22 hPsi_associated_SNPs_25156 0 0 1 0 0 Ribosome 0.438718606204544 0.438718417865089 0 0 hPsi_site_18880 iPseU_CNN:0;iRNA_PseU:0 18881 chr10 6258095 6258095 1 + G A UCEC 6258094 + 6258074 6258114 41 CTTGTGCATTCCAGGCAATGTGCCTTAGCTGCCTTGAGAGA CTTGTGCATTCCAGGCAATGTACCTTAGCTGCCTTGAGAGA < 41bp 0.429341546232477 0.836235755221454 0.23203385 0.5440154 prediction 0.672471510442908 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6258094 chr10:6258095 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_25157 0 0 1 2 2 Ribosome 0.438722963444014 0.438720749291889 0.0880308000000001 0 hPsi_site_18881 iPseU_CNN:0.0880308000000001;iRNA_PseU:0 18882 chr1 212798989 212798989 1 + C T LUAD 212798990 - 212798970 212799010 41 GTAGATGTTTTGGGGATGGATGCATTGAGCACATTAGTGGG GTAGATGTTTTGGGGATGGATACATTGAGCACATTAGTGGG < 41bp 0.526085766623452 0.862316053983075 0.3095314 0.5261732 prediction 0.672460574719246 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212798990 chr1:212798989 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25158 0 0 0 0 0 exosome 0.439181162636052 0.438775747062492 0.0523464 0 hPsi_site_18882 iPseU_CNN:0.0523464;iRNA_PseU:0 18883 chr16 66921818 66921818 1 + G A rs28682911 66921817 + 66921797 66921837 41 GTGAGCCAAGATCGCACCATTGCACTCCAGCCTGGGCAACA GTGAGCCAAGATCGCACCATTACACTCCAGCCTGGGCAACA < 41bp 0.474493624669368 0.836228986174166 0.44322267 0.799512 prediction 0.672457972348332 Functional Gain - PDP2 ENSG00000172840 UTR3 Human protein_coding chr16:66921817 chr16:66921818 . . 0 22 hPsi_associated_SNPs_25159 0 0 0 0 0 nucleolus 0.437167453403424 0.487052116959668 0.599024 0 hPsi_site_18883 iPseU_CNN:0.599024;iRNA_PseU:0 18884 chr13 100037518 100037518 1 + G A HNSC 100037517 + 100037497 100037537 41 GAGATGGGATTTTCCAGAGGTGATGCTTTGGAAGCCCTGAG GAGATGGGATTTTCCAGAGGTAATGCTTTGGAAGCCCTGAG < 41bp 0.436086223126286 0.836228975159063 0.2557277 0.35706148 prediction 0.672457950318125 Functional Gain - UBAC2 ENSG00000134882 CDS Human protein_coding chr13:100037517 chr13:100037518 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25160 0 0 1 0 1 Endoplasmic reticulum 0.438718591765918 0.438718592995326 0 0 hPsi_site_18884 iPseU_CNN:0;iRNA_PseU:0 18885 chr1 46726251 46726251 1 + C A UCEC 46726250 + 46726230 46726270 41 CATGTGGTTGTTGACCCTATTCTCAGTAAGGTTTTGCGGCC CATGTGGTTGTTGACCCTATTATCAGTAAGGTTTTGCGGCC < 41bp 0.478693148360601 0.836224975048539 0.30234933 0.32984406 prediction 0.672449950097078 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46726250 chr1:46726251 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_25161 0 0 1 0 2 Ribosome 0.438640235154625 0.437100156496252 0 0 hPsi_site_18885 iPseU_CNN:0;iRNA_PseU:0 18886 chr1 160328005 160328005 1 + G A UCEC 160328004 + 160327984 160328024 41 ATCGTCACCTACTGCATCAATGCCAAAGCTGATGTCCTTTT ATCGTCACCTACTGCATCAATACCAAAGCTGATGTCCTTTT < 41bp 0.447597695943092 0.836220151053793 0.22775927 0.38936383 prediction 0.672440302107586 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160328004 chr1:160328005 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25162 0 0 1 0 1 Endoplasmic reticulum 0.439249952551789 0.43064092916921 0 0 hPsi_site_18886 iPseU_CNN:0;iRNA_PseU:0 18887 chr11 134019073 134019073 1 + C A UCEC 134019072 + 134019052 134019092 41 ACACAAGTCATCGTTTGTGATCTGAGACCCGCGGTGTGGCT ACACAAGTCATCGTTTGTGATATGAGACCCGCGGTGTGGCT < 41bp 0.506619643931789 0.842838792320647 0.31791094 0.3297574 prediction 0.672438296777715 Functional Gain - JAM3 ENSG00000166086 CDS Human protein_coding chr11:134019072 chr11:134019073 synonymous SNV . 0 22 hPsi_associated_SNPs_25163 0 0 1 0 1 nucleoplasm 0.43371451152024 0.441386786919891 0 0 hPsi_site_18887 iPseU_CNN:0;iRNA_PseU:0 18888 chr11 102668772 102668772 1 + G A BLCA 102668771 + 102668751 102668791 41 CTAGAGTCGCTGGGAAGCTGTGAGACACCACACCCCAGAAC CTAGAGTCGCTGGGAAGCTGTAAGACACCACACCCCAGAAC < 41bp 0.561190722862779 0.897409812261608 0.4743313 0.75531834 prediction 0.67243817879766 Functional Gain - MMP1 ENSG00000196611 CDS Human protein_coding chr11:102668771 chr11:102668772 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25164 0 0 0 0 1 exosome 0.438738372848298 0.438718592289033 0.51063668 0 hPsi_site_18888 iPseU_CNN:0.51063668;iRNA_PseU:0 18889 chr15 50497486 50497486 1 + G A BLCA 50497485 + 50497465 50497505 41 TCAGCCAGCCAGTTTTGGGATGACTGCAGAAAATACAACGT TCAGCCAGCCAGTTTTGGGATAACTGCAGAAAATACAACGT < 41bp 0.417886957646021 0.836218790586013 0.20677456 0.34940362 prediction 0.672437581172025 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50497485 chr15:50497486 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25165 0 0 1 0 2 Ribosome 0.438718815426542 0.438716780728621 0 0 hPsi_site_18889 iPseU_CNN:0;iRNA_PseU:0 18890 chr10 91144441 91144441 1 + G A UCEC 91144440 + 91144420 91144460 41 AGGAGAAGTAAGTGATGCTTTGCTGTGCTATGAGAGGGCTC AGGAGAAGTAAGTGATGCTTTACTGTGCTATGAGAGGGCTC < 41bp 0.544543992546313 0.88075192968398 0.36847103 0.67544913 prediction 0.672415874275333 Functional Gain - IFIT1B ENSG00000204010 CDS Human protein_coding chr10:91144440 chr10:91144441 synonymous SNV . 0 22 hPsi_associated_SNPs_25166 0 0 0 0 0 exosome 0.439778854115502 0.43884728522171 0.35089826 0 hPsi_site_18890 iPseU_CNN:0.35089826;iRNA_PseU:0 18891 chr14 24114490 24114490 1 + G A rs7150155 24114489 + 24114469 24114509 41 TGGGGGCGGCTGCGTAGCTGTGGTCCCAGGCCCAGGAGCCT TGGGGGCGGCTGCGTAGCTGTAGTCCCAGGCCCAGGAGCCT < 41bp 0.559864509129596 0.896061007702972 0.19473132 0.6680876 prediction 0.672392997146752 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114489 chr14:24114490 synonymous SNV . 0 22 hPsi_associated_SNPs_25167 0 0 1 0 0 Ribosome 0.438718592997298 0.438718592993708 0.3361752 0 hPsi_site_18891 iPseU_CNN:0.3361752;iRNA_PseU:0 18892 chr10 118969663 118969663 1 + C A UCEC 118969662 + 118969642 118969682 41 TGTTTTAGAACACCCTAACTTCTTCCTGTTCTTCTCCATTT TGTTTTAGAACACCCTAACTTATTCCTGTTCTTCTCCATTT < 41bp 0.490505710779566 0.836192662007267 0.29777303 0.32182354 prediction 0.672385324014534 Functional Gain - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118969662 chr10:118969663 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_25168 0 0 0 0 0 unknown 0.438718510042716 0.438718598853277 0 0 hPsi_site_18892 iPseU_CNN:0;iRNA_PseU:0 18893 chr1 158435849 158435849 1 + G A UCEC 158435848 + 158435828 158435868 41 CACCTCCCTAGTATTTCATCTGCCCTTCCACTCCTCCAACC CACCTCCCTAGTATTTCATCTACCCTTCCACTCCTCCAACC < 41bp 0.551361927338229 0.887547192501156 0.37226558 0.6532127 prediction 0.672370530325854 Functional Gain - OR10K1 ENSG00000173285 CDS Human protein_coding chr1:158435848 chr1:158435849 synonymous SNV . 0 22 hPsi_associated_SNPs_25169 0 0 0 0 0 unknown 0.438718592994846 0.438718592982017 0.3064254 0 hPsi_site_18893 iPseU_CNN:0.3064254;iRNA_PseU:0 18894 chr11 89768524 89768524 1 + C A UCEC 89768523 + 89768503 89768543 41 AACTGGCAAGACATCCCATTTCTTGTCCAGTGCTCTGAATG AACTGGCAAGACATCCCATTTATTGTCCAGTGCTCTGAATG < 41bp 0.492878215012418 0.836182578893348 0.59595966 0.6000336 prediction 0.672365157786696 Functional Gain - TRIM49C ENSG00000204449 CDS Human protein_coding chr11:89768523 chr11:89768524 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25170 0 0 0 0 0 unknown 0.45121287397639 0.439207519790847 0.00814787999999989 0 hPsi_site_18894 iPseU_CNN:0.00814787999999989;iRNA_PseU:0 18895 chr12 66725116 66725116 1 + G A rs11176150 66725115 + 66725095 66725135 41 AACTCGTTTGAAACATTTCTTGCAAAGTAAGCTCTCCTCTA AACTCGTTTGAAACATTTCTTACAAAGTAAGCTCTCCTCTA < 41bp 0.435916519404791 0.836178381876111 0.2980781 0.43777224 prediction 0.672356763752223 Functional Gain - HELB ENSG00000127311 CDS Human protein_coding chr12:66725115 chr12:66725116 synonymous SNV . 0 22 hPsi_associated_SNPs_25171 0 0 1 0 0 nucleus 0.438718579770148 0.438718586003471 0 0 hPsi_site_18895 iPseU_CNN:0;iRNA_PseU:0 18896 chr8 24774787 24774787 1 + G A UCEC 24774786 + 24774766 24774806 41 GTCAGAAATGGAAGAGGCCCTGACAGCCATTACAGAGGAAT GTCAGAAATGGAAGAGGCCCTAACAGCCATTACAGAGGAAT < 41bp 0.441992726871352 0.836174273062648 0.20610619 0.2643183 prediction 0.672348546125295 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24774786 chr8:24774787 synonymous SNV . 0 22 hPsi_associated_SNPs_25172 0 0 0 0 0 exosome 0.438762249030204 0.438831038416964 0 0 hPsi_site_18896 iPseU_CNN:0;iRNA_PseU:0 18897 chr3 12858532 12858532 1 + G A LGG 12858531 + 12858511 12858551 41 GCCGTGCTGGCTGAGCTGCCTGCCCTGGTCAACGAGAGCGA GCCGTGCTGGCTGAGCTGCCTACCCTGGTCAACGAGAGCGA < 41bp 0.425264057231386 0.836162746124064 0.27124283 0.31327236 prediction 0.672325492248127 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858531 chr3:12858532 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_25173 0 0 0 0 0 chromatin 0.438721770726223 0.439256238095202 0 0 hPsi_site_18897 iPseU_CNN:0;iRNA_PseU:0 18898 chr20 57767489 57767489 1 + C A LUAD 57767488 + 57767468 57767508 41 GGGCCCCGGGCCCCGTGCGCTCCACCTGGACGCCCCCAGAC GGGCCCCGGGCCCCGTGCGCTACACCTGGACGCCCCCAGAC < 41bp 0.482222232804223 0.836162678079809 0.63540065 0.9226067 prediction 0.672325356159617 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767488 chr20:57767489 nonsynonymous SNV 0.297 3 22 hPsi_associated_SNPs_25174 0 0 1 0 0 exosome 0.438727767999666 0.437658550248176 0.5744121 0 hPsi_site_18898 iPseU_CNN:0.5744121;iRNA_PseU:0 18899 chr9 125487043 125487043 1 + G A STAD 125487042 + 125487022 125487062 41 TTCTATGGGAGTGTCATCTATGTCTATTTTAGGCCTCTGTC TTCTATGGGAGTGTCATCTATATCTATTTTAGGCCTCTGTC < 41bp 0.45932290743019 0.836157445964845 0.3518446 0.36429748 prediction 0.672314891929691 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125487042 chr9:125487043 nonsynonymous SNV 0.755 3 22 hPsi_associated_SNPs_25175 0 0 0 0 0 unknown 0.438718594380058 0.438718599644025 0 0 hPsi_site_18899 iPseU_CNN:0;iRNA_PseU:0 18900 chr7 42977079 42977079 1 + G A rs182381290 42977078 + 42977058 42977098 41 GGCTCCCACCATAGAGACTGTGGTGCTGTACACGGGAGAGA GGCTCCCACCATAGAGACTGTAGTGCTGTACACGGGAGAGA < 41bp 0.551068930215774 0.887223813665437 0.21650904 0.5516737 prediction 0.672309766899327 Functional Gain - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42977078 chr7:42977079 synonymous SNV . 0 22 hPsi_associated_SNPs_25176 0 0 1 0 0 Ribosome 0.43871859121435 0.438720711319497 0.1033474 0 hPsi_site_18900 iPseU_CNN:0.1033474;iRNA_PseU:0 18901 chr2 118854259 118854259 1 + G A UCEC 118854258 + 118854238 118854278 41 TTTTTTATTGGAGTATTTCTTGCATTAGTGTTAAATTTACT TTTTTTATTGGAGTATTTCTTACATTAGTGTTAAATTTACT < 41bp 0.463664063808412 0.836153564634492 0.20889303 0.45171094 prediction 0.672307129268983 Functional Gain - INSIG2 ENSG00000125629 CDS Human protein_coding chr2:118854258 chr2:118854259 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25177 0 0 1 0 0 Ribosome 0.438718302084923 0.438715873614821 0 0 hPsi_site_18901 iPseU_CNN:0;iRNA_PseU:0 18902 chr20 32345025 32345025 1 + C A CESC 32345024 + 32345004 32345044 41 CAGCCCTGGCAAACAGGGATTCAAACCCAAAGGACCAAACC CAGCCCTGGCAAACAGGGATTAAAACCCAAAGGACCAAACC < 41bp 0.518721886362489 0.8548734070448 0.80576515 0.85926175 prediction 0.672303041364622 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32345024 chr20:32345025 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25178 0 0 0 2 1 chromatin 0.438718592995406 0.438718592995125 0.1069932 0 hPsi_site_18902 iPseU_CNN:0.1069932;iRNA_PseU:0 18903 chr9 22451870 22451870 1 + G A rs147279220 22451869 + 22451849 22451889 41 CCAGTAAAGACTCAATAACTTGTGGCAGACTGTACTTCAGA CCAGTAAAGACTCAATAACTTATGGCAGACTGTACTTCAGA < 41bp 0.549090245880076 0.885240495722555 0.24739471 0.24807665 prediction 0.672300499684957 Functional Gain - DMRTA1 ENSG00000176399 CDS Human protein_coding chr9:22451869 chr9:22451870 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_25179 0 0 1 0 0 exosome 0.438718064213384 0.438729427124069 0 0 hPsi_site_18903 iPseU_CNN:0;iRNA_PseU:0 18904 chr11 66240739 66240739 1 + G A CESC 66240738 + 66240718 66240758 41 CGCTCCACAGAGAACATGATTGACTTCGTGGTAACAGACAC CGCTCCACAGAGAACATGATTAACTTCGTGGTAACAGACAC < 41bp 0.424455370987391 0.836146384654942 0.59419245 0.7772769 prediction 0.672292769309883 Functional Gain - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66240738 chr11:66240739 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_25180 0 0 0 0 1 Ribosome 0.438696885147711 0.438718574610049 0.3661689 0 hPsi_site_18904 iPseU_CNN:0.3661689;iRNA_PseU:0 18905 chr18 3456405 3456405 1 + C A LUSC 3456404 + 3456384 3456424 41 GATGAGGACAGCATGGACATTCCCTTGGACCTTTCTTCATC GATGAGGACAGCATGGACATTACCTTGGACCTTTCTTCATC < 41bp 0.509016127338643 0.845158140138758 0.2718444 0.44350597 prediction 0.67228402560023 Functional Gain - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3456404 chr18:3456405 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_25181 0 0 1 0 1 Cytosol 0.438922594145364 0.410000466361718 0 0 hPsi_site_18905 iPseU_CNN:0;iRNA_PseU:0 18906 chrX 153678577 153678577 1 + G A UCEC 153678576 + 153678556 153678596 41 GTCCCATGCAGGCAAGGTGGTGCTGAGGAGCTGGTACGAGA GTCCCATGCAGGCAAGGTGGTACTGAGGAGCTGGTACGAGA < 41bp 0.432086663871101 0.836139920349736 0.2904873 0.7650232 prediction 0.672279840699472 Functional Gain - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678576 chrX:153678577 synonymous SNV . 0 22 hPsi_associated_SNPs_25182 0 0 1 0 2 Ribosome 0.43861739195719 0.438640036668229 0.5300464 0 hPsi_site_18906 iPseU_CNN:0.5300464;iRNA_PseU:0 18907 chr10 64906008 64906008 1 + G A UCEC 64906007 + 64905987 64906027 41 CGAGCAGACCGTTTATTAGCTGCAGGCAAATACGAAGAGGC CGAGCAGACCGTTTATTAGCTACAGGCAAATACGAAGAGGC < 41bp 0.552775625850535 0.888900319315546 0.29815447 0.720297 prediction 0.672249386930023 Functional Gain - NRBF2 ENSG00000148572 CDS Human protein_coding chr10:64906007 chr10:64906008 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25183 0 0 0 0 2 Cytosol 0.43873244725663 0.438730936900774 0.440594 0 hPsi_site_18907 iPseU_CNN:0.440594;iRNA_PseU:0 18908 chr8 143763453 143763453 1 + G A HNSC 143763452 + 143763432 143763472 41 CGTGCTGTGACACCGACTTGTGCAACGCCAGCGGGGCCCAT CGTGCTGTGACACCGACTTGTACAACGCCAGCGGGGCCCAT < 41bp 0.439407824611582 0.836124286978853 0.6734496 0.9059189 prediction 0.672248573957706 Functional Gain - PSCA ENSG00000167653 CDS Human protein_coding chr8:143763452 chr8:143763453 nonsynonymous SNV 0.885 5 22 hPsi_associated_SNPs_25184 0 0 0 0 0 exosome 0.438718277388377 0.438715727464247 0.4649386 0 hPsi_site_18908 iPseU_CNN:0.4649386;iRNA_PseU:0 18909 chr9 130868088 130868088 1 + C A LUAD 130868087 + 130868067 130868107 41 AGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAATGGCATCA AGAAGGAGGGGCCAGGTCACTATGGCGGGGCAATGGCATCA < 41bp 0.533591990621267 0.869711986905069 0.2898208 0.33943412 prediction 0.672239992567604 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130868087 chr9:130868088 synonymous SNV . 0 22 hPsi_associated_SNPs_25185 0 0 1 0 2 Ribosome 0.438718592986374 0.438718911490504 0 0 hPsi_site_18909 iPseU_CNN:0;iRNA_PseU:0 18910 chr20 2397927 2397927 1 + C A LUSC 2397926 + 2397906 2397946 41 CAAGGCGGTGAACAGGCTGTTCGGCGTGGAAGCCTCTGGAA CAAGGCGGTGAACAGGCTGTTAGGCGTGGAAGCCTCTGGAA < 41bp 0.529982779354883 0.866101671869017 0.31853095 0.727433 prediction 0.672237785028268 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2397926 chr20:2397927 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_25186 0 0 0 0 0 exosome 0.438716497663165 0.438718598427183 0.454866 0 hPsi_site_18910 iPseU_CNN:0.454866;iRNA_PseU:0 18911 chr3 129196977 129196977 1 + G A LGG 129196976 + 129196956 129196996 41 TTCAGAGGACTTATCAGACATGCATTACCGGGTAAAGGAGA TTCAGAGGACTTATCAGACATACATTACCGGGTAAAGGAGA < 41bp 0.543190396764414 0.879309189345677 0.22977635 0.54996186 prediction 0.672237585162525 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129196976 chr3:129196977 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25187 0 0 1 0 1 Nucleus 0.43871859978004 0.438718593334574 0.09992372 0 hPsi_site_18911 iPseU_CNN:0.09992372;iRNA_PseU:0 18912 chr19 14829275 14829275 1 + C A STAD 14829274 + 14829254 14829294 41 AAAAATCCTTCAGATACAGCTCTGACCTTATCAGGCATGAG AAAAATCCTTCAGATACAGCTATGACCTTATCAGGCATGAG < 41bp 0.487733350635866 0.836118053050204 0.15050447 0.20400742 prediction 0.672236106100408 Functional Gain - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14829274 chr19:14829275 nonsynonymous SNV 0.126 3 22 hPsi_associated_SNPs_25188 0 0 1 0 0 Nucleus 0.438719957214639 0.438809702510847 0 0 hPsi_site_18912 iPseU_CNN:0;iRNA_PseU:0 18913 chr19 44636353 44636353 1 + C A UCEC 44636352 + 44636332 44636372 41 CTCAGAATTCACAACTTTATTCTCATCGCAGAGTCCACACT CTCAGAATTCACAACTTTATTATCATCGCAGAGTCCACACT < 41bp 0.501889342775787 0.83800448009096 0.5570903 0.5120424 prediction 0.672230274630346 Functional Gain - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44636352 chr19:44636353 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25189 0 0 1 0 0 exosome 0.438908613727373 0.438683560969508 0 0 hPsi_site_18913 iPseU_CNN:0;iRNA_PseU:0 18914 chr10 121214763 121214763 1 + G A rs12721548 121214762 + 121214742 121214782 41 AAGAAATTTCCACTCAGGTCTGTTTTCCGAGGCGGCCCCGG AAGAAATTTCCACTCAGGTCTATTTTCCGAGGCGGCCCCGG < 41bp 0.447524277190624 0.836114838631828 0.49596596 0.63505405 prediction 0.672229677263656 Functional Gain - GRK5 ENSG00000198873 UTR3 Human protein_coding chr10:121214762 chr10:121214763 . . 0 22 hPsi_associated_SNPs_25190 0 0 1 0 0 Cytosol 0.438718594119702 0.438718592942313 0.2701081 0 hPsi_site_18914 iPseU_CNN:0.2701081;iRNA_PseU:0 18915 chr19 51359498 51359498 1 + G A COAD 51359497 + 51359477 51359517 41 TCTAGCACCCCCTCTGCAGGTGCTGCACCCCTCATCCTGTC TCTAGCACCCCCTCTGCAGGTACTGCACCCCTCATCCTGTC < 41bp 0.428141595090965 0.836114451032156 0.23696846 0.77456 prediction 0.672228902064313 Functional Gain - KLK3 ENSG00000142515 CDS Human protein_coding chr19:51359497 chr19:51359498 nonsynonymous SNV 0.016 4 22 hPsi_associated_SNPs_25191 0 0 0 0 1 Cytosol 0.438718457712014 0.438714592849207 0.54912 0 hPsi_site_18915 iPseU_CNN:0.54912;iRNA_PseU:0 18916 chr5 33456256 33456256 1 + G A STAD 33456255 + 33456235 33456275 41 CCTTTCATTTTATCTTTAGATGTGGCCCTTTGATAGATCTC CCTTTCATTTTATCTTTAGATATGGCCCTTTGATAGATCTC < 41bp 0.436179054044678 0.836113850332892 0.3528678 0.3717131 prediction 0.672227700665784 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33456255 chr5:33456256 nonsynonymous SNV 0.953 4 22 hPsi_associated_SNPs_25192 0 0 1 0 2 Nucleus 0.438718592995096 0.43871859288875 0 0 hPsi_site_18916 iPseU_CNN:0;iRNA_PseU:0 18917 chrX 54578050 54578050 1 + C A LUAD 54578049 + 54578029 54578069 41 TTCATCCGGCTCTTGGATGCTCCAGGCATTGTCCCAGGGCC TTCATCCGGCTCTTGGATGCTACAGGCATTGTCCCAGGGCC < 41bp 0.472940820449599 0.836109405815441 0.2497516 0.33163914 prediction 0.672218811630881 Functional Gain - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54578049 chrX:54578050 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25193 0 0 1 0 1 Nucleus 0.438718582953425 0.438646947585293 0 0 hPsi_site_18917 iPseU_CNN:0;iRNA_PseU:0 18918 chr9 139887404 139887404 1 + G A BLCA 139887403 + 139887383 139887423 41 CGTTTTGGCCTGAGTGCGGCTGAGGACATCACCCCCCGGTT CGTTTTGGCCTGAGTGCGGCTAAGGACATCACCCCCCGGTT < 41bp 0.429505972092918 0.83610282561371 0.1882548 0.29829955 prediction 0.672205651227421 Functional Gain - C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887403 chr9:139887404 nonsynonymous SNV 0.914 1 22 hPsi_associated_SNPs_25194 0 0 1 0 2 Ribosome 0.438718592995704 0.438718603331971 0 0 hPsi_site_18918 iPseU_CNN:0;iRNA_PseU:0 18919 chr14 21794095 21794095 1 + G A COAD 21794094 + 21794074 21794114 41 ACTCAACCCAGTCCATATGCTGTGTACCGCTTCTTCACCTT ACTCAACCCAGTCCATATGCTATGTACCGCTTCTTCACCTT < 41bp 0.429388286677608 0.836102433345682 0.24596193 0.25672808 prediction 0.672204866691364 Functional Gain - RPGRIP1 ENSG00000092200 CDS Human protein_coding chr14:21794094 chr14:21794095 nonsynonymous SNV 0.902 1 22 hPsi_associated_SNPs_25195 0 0 0 0 0 chromatin 0.438718767008423 0.43871595959583 0 0 hPsi_site_18919 iPseU_CNN:0;iRNA_PseU:0 18920 chr11 64009984 64009984 1 + G A LUSC 64009983 + 64009963 64010003 41 TCAAGAAGCGGGTGGACCACTGTCCCATCAAATCGCGCAAA TCAAGAAGCGGGTGGACCACTATCCCATCAAATCGCGCAAA < 41bp 0.43447498693636 0.836096140315607 0.39941695 0.5125976 prediction 0.672192280631214 Functional Gain - FKBP2 ENSG00000173486 CDS Human protein_coding chr11:64009983 chr11:64009984 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_25196 0 0 1 0 1 Endoplasmic reticulum 0.438713791390524 0.438706101381196 0.0251952 0 hPsi_site_18920 iPseU_CNN:0.0251952;iRNA_PseU:0 18921 chr20 32255647 32255647 1 + G A UCEC 32255646 + 32255626 32255666 41 TGGGTAACGGGTGCTGCGTCTGCCTCAGCAGTGAGCGCTTC TGGGTAACGGGTGCTGCGTCTACCTCAGCAGTGAGCGCTTC < 41bp 0.449403414712866 0.836094720258883 0.29564875 0.48761094 prediction 0.672189440517765 Functional Gain - ACTL10 ENSG00000182584 CDS Human protein_coding chr20:32255646 chr20:32255647 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25197 0 0 0 0 0 exosome 0.437203683390853 0.432903714870105 0 0 hPsi_site_18921 iPseU_CNN:0;iRNA_PseU:0 18922 chr16 71571241 71571241 1 + C A rs199848968 71571240 + 71571220 71571260 41 CGAGAACGCACAAAGGGAGATCTCATGATTGACAGTCGCAT CGAGAACGCACAAAGGGAGATATCATGATTGACAGTCGCAT < 41bp 0.52278966071578 0.858879811871293 0.22951582 0.32000974 prediction 0.672180302311027 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71571240 chr16:71571241 nonsynonymous SNV 0.507 5 22 hPsi_associated_SNPs_25198 0 0 0 0 0 exosome 0.43871012381319 0.436510508048166 0 0 hPsi_site_18922 iPseU_CNN:0;iRNA_PseU:0 18923 chr21 33887525 33887525 1 + C A rs376056990 33887524 + 33887504 33887544 41 CCACATGCATCTTGATGCGATCGCACTTTCTGAAGAAGGAA CCACATGCATCTTGATGCGATAGCACTTTCTGAAGAAGGAA < 41bp 0.493542761270794 0.836078703218145 0.14517227 0.22762862 prediction 0.672157406436291 Functional Gain - EVA1C ENSG00000166979 UTR3 Human protein_coding chr21:33887524 chr21:33887525 . . 0 22 hPsi_associated_SNPs_25199 0 0 0 7 0 Ribosome 0.438719562856023 0.438718593129428 0 0 hPsi_site_18923 iPseU_CNN:0;iRNA_PseU:0 18924 chr10 122624670 122624670 1 + G A COAD 122624669 + 122624649 122624689 41 TTTAATCCTTGACCTTGAGGTGAATCAGACGGTGGGTGTGA TTTAATCCTTGACCTTGAGGTAAATCAGACGGTGGGTGTGA < 41bp 0.438714383685521 0.836075639150956 0.23140389 0.38488185 prediction 0.672151278301913 Functional Gain - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122624669 chr10:122624670 synonymous SNV . 0 22 hPsi_associated_SNPs_25200 0 0 1 0 1 Nucleus 0.43869598250184 0.438723613428707 0 0 hPsi_site_18924 iPseU_CNN:0;iRNA_PseU:0 Current cigarettes per day in chronic obstructive pulmonary disease 18925 chr14 101200684 101200684 1 + C A rs34429112 101200683 + 101200663 101200703 41 CCGGTGCCCAGCCGGCTTCATCGACAAGACCTGCAGCCGCC CCGGTGCCCAGCCGGCTTCATAGACAAGACCTGCAGCCGCC < 41bp 0.481804206374068 0.836075562496132 0.17552173 0.38016087 prediction 0.672151124992264 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200683 chr14:101200684 synonymous SNV . 0 22 hPsi_associated_SNPs_25201 0 0 1 0 1 Endoplasmic reticulum 0.438765634242421 0.438718994147548 0 0 hPsi_site_18925 iPseU_CNN:0;iRNA_PseU:0 18926 chr16 84188229 84188229 1 + C A COAD 84188228 + 84188208 84188248 41 GAGTACACAGGGCTGCGCTGTCTCTGGCTGCAGAGCAATGG GAGTACACAGGGCTGCGCTGTATCTGGCTGCAGAGCAATGG < 41bp 0.463960010615693 0.836072381660488 0.22553423 0.4979311 prediction 0.672144763320976 Functional Gain - DNAAF1 ENSG00000154099 CDS Human protein_coding chr16:84188228 chr16:84188229 nonsynonymous SNV 0.928 2 22 hPsi_associated_SNPs_25202 0 0 0 0 1 Cytosol 0.438719638250021 0.438719060397406 0 0 hPsi_site_18926 iPseU_CNN:0;iRNA_PseU:0 18927 chr6 170627579 170627579 1 + G A LUSC 170627578 + 170627558 170627598 41 ATCCAGGCGAGAAGTTCCCGTGTATACAGATTCTGAACCCA ATCCAGGCGAGAAGTTCCCGTATATACAGATTCTGAACCCA < 41bp 0.435762135613002 0.83606220666632 0.3305985 0.6275916 prediction 0.67212441333264 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627578 chr6:170627579 synonymous SNV . 0 22 hPsi_associated_SNPs_25203 0 0 1 0 0 Cytosol 0.438718485913409 0.438718592575313 0.2551832 0 hPsi_site_18927 iPseU_CNN:0.2551832;iRNA_PseU:0 18928 chr2 74043571 74043571 1 + C A LUAD 74043570 + 74043550 74043590 41 GTTTCTCGGCGGCCAAACCCTCTAGCCTCACGTAGGCCTGC GTTTCTCGGCGGCCAAACCCTATAGCCTCACGTAGGCCTGC < 41bp 0.480965579692772 0.836061773847393 0.62951076 0.74989706 prediction 0.672123547694785 Functional Gain - C2orf78 ENSG00000187833 CDS Human protein_coding chr2:74043570 chr2:74043571 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25204 0 0 0 0 0 unknown 0.438718601625098 0.438716367094765 0.2407726 0 hPsi_site_18928 iPseU_CNN:0.2407726;iRNA_PseU:0 18929 chr12 81110845 81110845 1 + G A LGG 81110844 + 81110824 81110864 41 CCGCCTGCCTCTCAGCAGGATGGACGTGATGGATGGCTGCC CCGCCTGCCTCTCAGCAGGATAGACGTGATGGATGGCTGCC < 41bp 0.458841623053961 0.836060626235452 0.20137405 0.3429932 prediction 0.672121252470903 Functional Gain - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81110844 chr12:81110845 nonsynonymous SNV 0.881 5 22 hPsi_associated_SNPs_25205 0 0 0 0 0 unknown 0.438718593009352 0.438712889865947 0 0 hPsi_site_18929 iPseU_CNN:0;iRNA_PseU:0 18930 chr1 160390279 160390279 1 + G A OV 160390278 + 160390258 160390298 41 CAACCCTGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCA CAACCCTGCCCTCCTCAACCTACCCAAGTCCGTCCTGGCCA < 41bp 0.566954232208277 0.9030144262388 0.1861709 0.3878687 prediction 0.672120388061046 Functional Gain - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160390278 chr1:160390279 synonymous SNV . 0 22 hPsi_associated_SNPs_25206 0 0 0 0 1 exosome 0.438718592995102 0.438718591364019 0 0 hPsi_site_18930 iPseU_CNN:0;iRNA_PseU:0 18931 chr1 223943324 223943324 1 + G A STAD 223943323 + 223943303 223943343 41 GAGGAAGATGGGCGAGGACATGCACACCATCGGCTTTGGCA GAGGAAGATGGGCGAGGACATACACACCATCGGCTTTGGCA < 41bp 0.550423666647404 0.886480913955126 0.3341972 0.7280479 prediction 0.672114494615444 Functional Gain - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943323 chr1:223943324 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_25207 0 0 1 0 1 Ribosome 0.438726372433097 0.438728939423123 0.4560958 0 hPsi_site_18931 iPseU_CNN:0.4560958;iRNA_PseU:0 18932 chrX 46433867 46433867 1 + G A UCEC 46433866 + 46433846 46433886 41 CTTCCGCTGCGACTTCTCCGTGCTGCGGCTGTACGCGCCGC CTTCCGCTGCGACTTCTCCGTACTGCGGCTGTACGCGCCGC < 41bp 0.448040356631768 0.836053426246435 0.5727028 0.91094965 prediction 0.67210685249287 Functional Gain - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46433866 chrX:46433867 synonymous SNV . 0 22 hPsi_associated_SNPs_25208 0 0 1 0 0 Endoplasmic reticulum 0.438716205046118 0.439081695014871 0.6764937 0 hPsi_site_18932 iPseU_CNN:0.6764937;iRNA_PseU:0 18933 chr16 67877244 67877244 1 + G A BLCA 67877243 + 67877223 67877263 41 GAGCTCCTGCGCAAGCTGAATGAGCAGCGGGACATCCTGGC GAGCTCCTGCGCAAGCTGAATAAGCAGCGGGACATCCTGGC < 41bp 0.445007000745506 0.836053251038385 0.28417456 0.56611556 prediction 0.67210650207677 Functional Gain - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67877243 chr16:67877244 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_25209 0 0 1 0 0 Ribosome 0.438687920084894 0.438711726615618 0.13223112 0 hPsi_site_18933 iPseU_CNN:0.13223112;iRNA_PseU:0 18934 chr3 93813047 93813047 1 + C A UCEC 93813046 + 93813026 93813066 41 GGCTAAGGCAGACGTTGGAATCTTTCATCCCACAGCCTTTG GGCTAAGGCAGACGTTGGAATATTTCATCCCACAGCCTTTG < 41bp 0.518343060698846 0.85439569921181 0.43171513 0.65190005 prediction 0.672105277025928 Functional Gain - NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93813046 chr3:93813047 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25210 0 0 1 0 2 chromatin 0.438718592993189 0.43871859223207 0.3038001 0 hPsi_site_18934 iPseU_CNN:0.3038001;iRNA_PseU:0 18935 chr22 25570273 25570273 1 + G A rs5760891 25570272 + 25570252 25570292 41 ACAGCCCCCCAGCAGCCGTTTGTCTTCTCTGTCCTCCCAAA ACAGCCCCCCAGCAGCCGTTTATCTTCTCTGTCCTCCCAAA < 41bp 0.429800698495088 0.836050009461516 0.5493551 0.68287987 prediction 0.672100018923031 Functional Gain - KIAA1671 ENSG00000197077 CDS Human protein_coding chr22:25570272 chr22:25570273 synonymous SNV . 0 22 hPsi_associated_SNPs_25211 0 0 0 0 1 Nucleus 0.438720582099368 0.438728730988094 0.26704954 0 hPsi_site_18935 iPseU_CNN:0.26704954;iRNA_PseU:0 18936 chr14 20692344 20692344 1 + G A BLCA 20692343 + 20692323 20692363 41 CCATCATGACTGGGAAGTTCTGTATAATTCTGGTCTGTGTA CCATCATGACTGGGAAGTTCTATATAATTCTGGTCTGTGTA < 41bp 0.544966402867333 0.88101324155158 0.23102605 0.329626 prediction 0.672093677368493 Functional Gain - OR11H6 ENSG00000176219 CDS Human protein_coding chr14:20692343 chr14:20692344 nonsynonymous SNV 0.165 2 22 hPsi_associated_SNPs_25212 0 0 0 0 0 unknown 0.438718572948585 0.438718582148346 0 0 hPsi_site_18936 iPseU_CNN:0;iRNA_PseU:0 18937 chr17 3119395 3119395 1 + C A KIRC 3119394 + 3119374 3119414 41 GCCAATGCCCTCCCCCACACTCTGCTCACAGCTAGTCTGTC GCCAATGCCCTCCCCCACACTATGCTCACAGCTAGTCTGTC < 41bp 0.505007446712279 0.841053472786252 0.42790678 0.6953083 prediction 0.672092052147947 Functional Gain - OR1A1 ENSG00000172146 CDS Human protein_coding chr17:3119394 chr17:3119395 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_25213 0 0 0 0 0 unknown 0.437685042952675 0.438729467943594 0.3906166 0 hPsi_site_18937 iPseU_CNN:0.3906166;iRNA_PseU:0 18938 chr20 13279979 13279979 1 + G A MESO 13279978 + 13279958 13279998 41 ACAAGGTGGACGTCCTGCCCTGGATTATCTGCAAGGGTGAC ACAAGGTGGACGTCCTGCCCTAGATTATCTGCAAGGGTGAC < 41bp 0.426987186299146 0.8360451500589 0.23454231 0.33143532 prediction 0.6720903001178 Functional Gain - ISM1 ENSG00000101230 CDS Human protein_coding chr20:13279978 chr20:13279979 stopgain 1.000 1 22 hPsi_associated_SNPs_25214 0 0 0 0 0 exosome 0.438718592414509 0.438718906314415 0 0 hPsi_site_18938 iPseU_CNN:0;iRNA_PseU:0 18939 chr6 170105255 170105255 1 + C T UCEC 170105256 - 170105236 170105276 41 ACAGAGGTTATCATACTTTTTGTGTGGGCCTTGGTGCTATT ACAGAGGTTATCATACTTTTTATGTGGGCCTTGGTGCTATT < 41bp 0.533558426937196 0.869599915229409 0.29817128 0.4366423 prediction 0.672082976584425 Functional Gain - PHF10 ENSG00000130024 CDS Human protein_coding chr6:170105256 chr6:170105255 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_25215 0 0 1 0 1 Ribosome 0.438741487373051 0.438736460790052 0 0 hPsi_site_18939 iPseU_CNN:0;iRNA_PseU:0 18940 chr20 37384523 37384523 1 + G A SKCM 37384522 + 37384502 37384542 41 ACTTCTAGAGGATGGCCAGATGGATCAGTTTCACAAAGCTC ACTTCTAGAGGATGGCCAGATAGATCAGTTTCACAAAGCTC < 41bp 0.428481510968744 0.83603847699704 0.20954585 0.27241328 prediction 0.672076953994081 Functional Gain - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37384522 chr20:37384523 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25216 0 0 1 0 1 chromatin 0.435813347652371 0.424364609130436 0 0 hPsi_site_18940 iPseU_CNN:0;iRNA_PseU:0 18941 chr16 677616 677616 1 + C A rs186820807 677615 + 677595 677635 41 CTCGCGGAGTAACTGCAAGATCTCCTAGCGGGGATGGGCGG CTCGCGGAGTAACTGCAAGATATCCTAGCGGGGATGGGCGG < 41bp 0.504638048046283 0.840673951608758 0.37639564 0.45191947 prediction 0.672071807124952 Functional Gain - RAB40C ENSG00000197562 CDS Human protein_coding chr16:677615 chr16:677616 synonymous SNV . 0 22 hPsi_associated_SNPs_25217 0 0 1 0 0 Ribosome 0.438718620648199 0.438718592994285 0 0 hPsi_site_18941 iPseU_CNN:0;iRNA_PseU:0 18942 chr12 2929346 2929346 1 + G A BRCA 2929345 + 2929325 2929365 41 AGGTGAGGGTCCTGAACATCTGACAGGGCAGCTGGTGTCCC AGGTGAGGGTCCTGAACATCTAACAGGGCAGCTGGTGTCCC < 41bp 0.416933911790516 0.836035426197959 0.24124363 0.45743257 prediction 0.672070852395917 Functional Gain - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2929345 chr12:2929346 synonymous SNV . 0 22 hPsi_associated_SNPs_25218 0 0 1 2 2 nucleoplasm 0.438718592995087 0.438718580824923 0 0 hPsi_site_18942 iPseU_CNN:0;iRNA_PseU:0 18943 chr10 104215215 104215215 1 + G A rs184637328 104215214 + 104215194 104215234 41 AACCACACCCGACTAATTTTTGTAGAGATGAGATCCCACTA AACCACACCCGACTAATTTTTATAGAGATGAGATCCCACTA < 41bp 0.454975108717962 0.836035173481812 0.3913914 0.51798487 prediction 0.672070346963623 Functional Gain - RPARP-AS1 ENSG00000269609 ncRNA_exonic Human processed_transcript chr10:104215214 chr10:104215215 . . 0 22 hPsi_associated_SNPs_25219 0 0 1 0 0 unknown 0.438719015432187 0.4387205291664 0.0359697400000001 0 hPsi_site_18943 iPseU_CNN:0.0359697400000001;iRNA_PseU:0 18944 chr8 99170251 99170251 1 + C A STAD 99170250 + 99170230 99170270 41 CCCGTGGCTGGGCAGGAAGCTCTGACTCTAGGGCTGTGGTC CCCGTGGCTGGGCAGGAAGCTATGACTCTAGGGCTGTGGTC < 41bp 0.518943087826139 0.854976507892526 0.1789414 0.33711493 prediction 0.672066840132775 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99170250 chr8:99170251 nonsynonymous SNV 0.273 0 22 hPsi_associated_SNPs_25220 0 0 1 0 0 Mitochondrion 0.438724480980744 0.438718678965368 0 0 hPsi_site_18944 iPseU_CNN:0;iRNA_PseU:0 18945 chr4 76714941 76714941 1 + G A SKCM 76714940 + 76714920 76714960 41 GCTGCTGTGGCCCTTGCCCATGCGTTGCAAGAAAATGCCAC GCTGCTGTGGCCCTTGCCCATACGTTGCAAGAAAATGCCAC < 41bp 0.42630300013051 0.836029119524099 0.25096408 0.5580688 prediction 0.672058239048198 Functional Gain - USO1 ENSG00000138768 CDS Human protein_coding chr4:76714940 chr4:76714941 nonsynonymous SNV 0.684 1 22 hPsi_associated_SNPs_25221 0 0 1 0 1 Nucleus 0.438672678793552 0.438606872252661 0.1161376 0 hPsi_site_18945 iPseU_CNN:0.1161376;iRNA_PseU:0 18946 chrX 77380850 77380850 1 + G A OV 77380849 + 77380829 77380869 41 GGAGACACTGCCACTTGCTGTGCCAAATGGAACACGGAGGA GGAGACACTGCCACTTGCTGTACCAAATGGAACACGGAGGA < 41bp 0.421758505676218 0.836025620650822 0.27997488 0.57055944 prediction 0.672051241301644 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380849 chrX:77380850 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25222 0 0 1 2 2 Ribosome 0.438702191143379 0.437987663918385 0.14111888 0 hPsi_site_18946 iPseU_CNN:0.14111888;iRNA_PseU:0 18947 chr1 154319200 154319200 1 + C A UCEC 154319199 + 154319179 154319219 41 TGCCATGCACAGCAATGGGCTCTTCGACATGTTTCCCAACC TGCCATGCACAGCAATGGGCTATTCGACATGTTTCCCAACC < 41bp 0.52309028146279 0.859113401727249 0.30980706 0.34822923 prediction 0.672046240528918 Functional Gain - ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154319199 chr1:154319200 synonymous SNV . 0 22 hPsi_associated_SNPs_25223 0 0 1 0 1 chromatin 0.43866990068287 0.438717934522946 0 0 hPsi_site_18947 iPseU_CNN:0;iRNA_PseU:0 18948 chr11 66262925 66262925 1 + G A SKCM 66262924 + 66262904 66262944 41 AGAGTGCCGGGCTGAGAGCGTGGGTCTCTACCTCTGTCTCC AGAGTGCCGGGCTGAGAGCGTAGGTCTCTACCTCTGTCTCC < 41bp 0.566230574209 0.90223355187213 0.24405158 0.6171852 prediction 0.672005955326259 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262924 chr11:66262925 synonymous SNV . 0 22 hPsi_associated_SNPs_25224 0 0 1 0 2 Nucleus 0.43871981508442 0.438709589737501 0.2343704 0 hPsi_site_18948 iPseU_CNN:0.2343704;iRNA_PseU:0 18949 chr9 90343513 90343513 1 + C A UCEC 90343512 + 90343492 90343532 41 CTTTTCAGGGTCAGTGTGGTTCTTGTTGGGCTTTTAGTGCT CTTTTCAGGGTCAGTGTGGTTATTGTTGGGCTTTTAGTGCT < 41bp 0.522751581271661 0.858749606523693 0.34821185 0.37779 prediction 0.671996050504065 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90343512 chr9:90343513 nonsynonymous SNV 0.837 5 22 hPsi_associated_SNPs_25225 0 0 1 0 0 Ribosome 0.438718676695931 0.437912906588873 0 0 hPsi_site_18949 iPseU_CNN:0;iRNA_PseU:0 18950 chr1 116202372 116202372 1 + C A UCEC 116202371 + 116202351 116202391 41 AGCCCCTGTTGGGAAATGATTCTACTCGGACAGAGGAAGTT AGCCCCTGTTGGGAAATGATTATACTCGGACAGAGGAAGTT < 41bp 0.515083091292964 0.851079817245388 0.65953505 0.6285936 prediction 0.671993451904848 Functional Gain - VANGL1 ENSG00000173218 CDS Human protein_coding chr1:116202371 chr1:116202372 nonsynonymous SNV 0.616 1 22 hPsi_associated_SNPs_25226 0 0 1 0 2 Ribosome 0.438718592988101 0.43871859298964 0 0 hPsi_site_18950 iPseU_CNN:0;iRNA_PseU:0 18951 chr6 36262059 36262059 1 + C A UCEC 36262058 + 36262038 36262078 41 CTTCAGTGGGCAGCAGGACATCTGTCCCCGGGACTGCCCGG CTTCAGTGGGCAGCAGGACATATGTCCCCGGGACTGCCCGG < 41bp 0.465268195719455 0.835995805338949 0.30700344 0.4318029 prediction 0.671991610677898 Functional Gain - PNPLA1 ENSG00000180316 CDS Human protein_coding chr6:36262058 chr6:36262059 synonymous SNV . 0 22 hPsi_associated_SNPs_25227 0 0 0 0 1 exosome 0.438718572172928 0.438749168669695 0 0 hPsi_site_18951 iPseU_CNN:0;iRNA_PseU:0 18952 chr22 32756547 32756547 1 + G A SKCM 32756546 + 32756526 32756566 41 AGGGATGGAAGCCGCCTCTCTGCCAGCACGGTGCCGCTGAC AGGGATGGAAGCCGCCTCTCTACCAGCACGGTGCCGCTGAC < 41bp 0.55832809419755 0.894321045735191 0.4075877 0.7301121 prediction 0.671985903075281 Functional Gain - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32756546 chr22:32756547 nonsynonymous SNV 0.073 3 22 hPsi_associated_SNPs_25228 0 0 0 0 0 exosome 0.438719414264777 0.438675266341207 0.4602242 0 hPsi_site_18952 iPseU_CNN:0.4602242;iRNA_PseU:0 18953 chrX 154005130 154005130 1 + G A ESCA 154005129 + 154005109 154005149 41 GAAAGCAAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGGC GAAAGCAAAAGAGGTAGAATTAGTTTCTGAGTAGTGAAGGC < 41bp 0.447479190656948 0.835991482623414 0.36063403 0.51832426 prediction 0.671982965246829 Functional Gain - DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005129 chrX:154005130 synonymous SNV . 0 22 hPsi_associated_SNPs_25229 0 0 1 0 1 Cytosol 0.438718552376924 0.438718549977467 0.03664852 0 hPsi_site_18953 iPseU_CNN:0.03664852;iRNA_PseU:0 18954 chr1 75606712 75606712 1 + G A STAD 75606711 + 75606691 75606731 41 GTCCGGTGTCTCTCCTGCAGTGTTTGCAGAACCTCCCTAGG GTCCGGTGTCTCTCCTGCAGTATTTGCAGAACCTCCCTAGG < 41bp 0.420967196857634 0.835985801182059 0.2968511 0.5353116 prediction 0.671971602364117 Functional Gain - LHX8 ENSG00000162624 CDS Human protein_coding chr1:75606711 chr1:75606712 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_25230 0 0 0 0 2 exosome 0.438718592671822 0.438718592990733 0.0706232 0 hPsi_site_18954 iPseU_CNN:0.0706232;iRNA_PseU:0 18955 chr7 87514382 87514382 1 + C A GBM 87514381 + 87514361 87514401 41 CACAAACCTTGGGTCGAATTTCTCCTGTACCAAGTCCAGAA CACAAACCTTGGGTCGAATTTATCCTGTACCAAGTCCAGAA < 41bp 0.485188063961568 0.835985392421192 0.3103876 0.27921236 prediction 0.671970784842384 Functional Gain - DBF4 ENSG00000006634 CDS Human protein_coding chr7:87514381 chr7:87514382 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_25231 0 0 0 0 2 chromatin 0.438717933338882 0.438718592959158 0 0 hPsi_site_18955 iPseU_CNN:0;iRNA_PseU:0 18956 chr15 40863814 40863814 1 + C A UCEC 40863813 + 40863793 40863833 41 TCTTTGACAGGACAATGATTTCTTGCGGAACACAGTGCACA TCTTTGACAGGACAATGATTTATTGCGGAACACAGTGCACA < 41bp 0.522217618133865 0.858201163903504 0.351454 0.68758863 prediction 0.671967091539278 Functional Gain - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40863813 chr15:40863814 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25232 0 0 1 0 1 Cytosol 0.438144308487255 0.43882805140434 0.37517726 0 hPsi_site_18956 iPseU_CNN:0.37517726;iRNA_PseU:0 18957 chr3 12858029 12858029 1 + C A THCA 12858028 + 12858008 12858048 41 TGATGGCCTGTGTGGCTGACTCTTTCTACAAGATTGCAGCC TGATGGCCTGTGTGGCTGACTATTTCTACAAGATTGCAGCC < 41bp 0.523669684526494 0.859649154880203 0.31887215 0.34062764 prediction 0.671958940707417 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858028 chr3:12858029 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_25233 0 0 1 0 0 chromatin 0.438719012835077 0.438605883584459 0 0 hPsi_site_18957 iPseU_CNN:0;iRNA_PseU:0 18958 chr19 7960608 7960608 1 + C A COAD 7960607 + 7960587 7960627 41 GGCCATGCTCATGATTGGGGTCTTTGGCTGCACCCTCCAGG GGCCATGCTCATGATTGGGGTATTTGGCTGCACCCTCCAGG < 41bp 0.523428295648998 0.859401623589182 0.9016078 0.87687993 prediction 0.671946655880368 Functional Gain - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7960607 chr19:7960608 synonymous SNV . 0 22 hPsi_associated_SNPs_25234 0 0 1 0 1 chromatin 0.438718592997561 0.438718592954139 0 0 hPsi_site_18958 iPseU_CNN:0;iRNA_PseU:0 18959 chr19 45911748 45911748 1 + G T rs143757857 45911749 - 45911729 45911769 41 CACCTGCATCTCCTTTTTCTTCTTCCCTGAGGTGAGCAGGT CACCTGCATCTCCTTTTTCTTATTCCCTGAGGTGAGCAGGT < 41bp 0.495069970380092 0.835967025024554 0.28893703 0.36840677 prediction 0.671934050049108 Functional Gain - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45911749 chr19:45911748 nonsynonymous SNV 0.031 2 22 hPsi_associated_SNPs_25235 0 0 1 0 0 Ribosome 0.438718084126543 0.438885246447639 0 0 hPsi_site_18959 iPseU_CNN:0;iRNA_PseU:0 18960 chr14 77242295 77242295 1 + C A LUAD 77242294 + 77242274 77242314 41 CATCAGCTTCAAGACCTACTTCTCAGGGAACTACTTCCGCC CATCAGCTTCAAGACCTACTTATCAGGGAACTACTTCCGCC < 41bp 0.526363909529595 0.862328953984308 0.58819914 0.60908955 prediction 0.671930088909425 Functional Gain - VASH1 ENSG00000071246 CDS Human protein_coding chr14:77242294 chr14:77242295 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25236 0 0 0 0 1 Endoplasmic reticulum 0.438718593016059 0.438718592996962 0.0417808200000001 0 hPsi_site_18960 iPseU_CNN:0.0417808200000001;iRNA_PseU:0 18961 chr22 37326490 37326490 1 + G A ESCA 37326489 + 37326469 37326509 41 GCTCAGCTGCTCCTGGGAGGTGAGGAAGGAGGTGGCCAGCT GCTCAGCTGCTCCTGGGAGGTAAGGAAGGAGGTGGCCAGCT < 41bp 0.412483020539202 0.835959861656009 0.18451062 0.3309848 prediction 0.671919723312018 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37326489 chr22:37326490 synonymous SNV . 0 22 hPsi_associated_SNPs_25237 0 0 0 0 1 Endoplasmic reticulum 0.438718594913679 0.438718592808318 0 0 hPsi_site_18961 iPseU_CNN:0;iRNA_PseU:0 18962 chr10 124895953 124895953 1 + C A rs375516651 124895952 + 124895932 124895972 41 GACCCCCGCCGGCGGCCACCTCCCGCGACCTGAAGGTACCG GACCCCCGCCGGCGGCCACCTACCGCGACCTGAAGGTACCG < 41bp 0.496394651614535 0.835953383214045 0.14635715 0.31533235 prediction 0.67190676642809 Functional Gain - HMX3 ENSG00000188620 CDS Human protein_coding chr10:124895952 chr10:124895953 synonymous SNV . 0 22 hPsi_associated_SNPs_25238 0 0 0 0 1 nucleolus 0.438806316421252 0.438710969646586 0 0 hPsi_site_18962 iPseU_CNN:0;iRNA_PseU:0 18963 chr12 58009772 58009772 1 + C A LUAD 58009771 + 58009751 58009791 41 GATCAAGCATGTGGCTCAGATCTTGGAGAGCCAACGGGACT GATCAAGCATGTGGCTCAGATATTGGAGAGCCAACGGGACT < 41bp 0.526734083767818 0.862683843160139 0.22108275 0.4170852 prediction 0.671899518784642 Functional Gain - ARHGEF25 ENSG00000240771 CDS Human protein_coding chr12:58009771 chr12:58009772 synonymous SNV . 0 22 hPsi_associated_SNPs_25239 0 0 1 0 1 chromatin 0.438716658083903 0.438716815358658 0 0 hPsi_site_18963 iPseU_CNN:0;iRNA_PseU:0 18964 chr11 77884968 77884968 1 + C T UCEC 77884969 - 77884949 77884989 41 CCTCAAGAGGCTCTGGGTGGTGCCCGCCAACAAGCAGATCA CCTCAAGAGGCTCTGGGTGGTACCCGCCAACAAGCAGATCA < 41bp 0.559834382909997 0.895780007312815 0.17795148 0.7421081 prediction 0.671891248805635 Functional Gain - KCTD21 ENSG00000188997 CDS Human protein_coding chr11:77884969 chr11:77884968 synonymous SNV . 0 22 hPsi_associated_SNPs_25240 0 0 0 0 0 Cytosol 0.438713201342204 0.438714145192142 0.4842162 0 hPsi_site_18964 iPseU_CNN:0.4842162;iRNA_PseU:0 18965 chr13 39613321 39613321 1 + C A COAD 39613320 + 39613300 39613340 41 TCCTGGAGAACTGAGAAAATTCTTTACCGGCTGGATGTGGG TCCTGGAGAACTGAGAAAATTATTTACCGGCTGGATGTGGG < 41bp 0.516867793991488 0.852813188395925 0.32132602 0.3157783 prediction 0.671890788808875 Functional Gain - NHLRC3 ENSG00000188811 CDS Human protein_coding chr13:39613320 chr13:39613321 nonsynonymous SNV 0.915 0 22 hPsi_associated_SNPs_25241 0 0 1 0 1 Endoplasmic reticulum 0.438718594325556 0.438691079324408 0 0 hPsi_site_18965 iPseU_CNN:0;iRNA_PseU:0 18966 chr11 62546432 62546432 1 + G A BLCA 62546431 + 62546411 62546451 41 AGGGGATGATCCGCAACTGATGAAGGTGAGCGAGTGGGCCC AGGGGATGATCCGCAACTGATAAAGGTGAGCGAGTGGGCCC < 41bp 0.433546088371806 0.83594280270136 0.30754095 0.50532347 prediction 0.67188560540272 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62546431 chr11:62546432 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25242 0 0 1 0 2 Ribosome 0.438680587660382 0.43871859299511 0.01064694 0 hPsi_site_18966 iPseU_CNN:0.01064694;iRNA_PseU:0 18967 chr10 105165820 105165820 1 + C A KIRC 105165819 + 105165799 105165839 41 GTTGATGGGACCAGAGCTTTTCTGCCACTGCTGAAAGCCCA GTTGATGGGACCAGAGCTTTTATGCCACTGCTGAAAGCCCA < 41bp 0.473839738441375 0.835939915534413 0.3486473 0.3360827 prediction 0.671879831068826 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105165819 chr10:105165820 nonsynonymous SNV 0.632 4 22 hPsi_associated_SNPs_25243 0 0 1 0 2 Nucleus 0.438724009544348 0.438949645848434 0 0 hPsi_site_18967 iPseU_CNN:0;iRNA_PseU:0 18968 chr16 2980469 2980469 1 + G A rs369497734 2980468 + 2980448 2980488 41 CGGGGGCCGCCTCCTGGTGCTGGAGTCCTTCCTGTACAAGC CGGGGGCCGCCTCCTGGTGCTAGAGTCCTTCCTGTACAAGC < 41bp 0.557195979060511 0.893134674439166 0.26286924 0.4711755 prediction 0.671877390757311 Functional Gain - FLYWCH1 ENSG00000059122 CDS Human protein_coding chr16:2980468 chr16:2980469 synonymous SNV . 0 22 hPsi_associated_SNPs_25244 0 0 1 0 2 chromatin 0.438715558080239 0.438718306632925 0 0 hPsi_site_18968 iPseU_CNN:0;iRNA_PseU:0 18969 chr1 248525256 248525256 1 + C A KIRC 248525255 + 248525235 248525275 41 TCATGGGTGTGAATAAGATCTCAGCCCCTGAGTGTGGGATG TCATGGGTGTGAATAAGATCTAAGCCCCTGAGTGTGGGATG < 41bp 0.50250113593448 0.83843916930648 0.18238202 0.25138396 prediction 0.671876066744001 Functional Gain - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525255 chr1:248525256 stopgain 0.525 0 22 hPsi_associated_SNPs_25245 0 0 0 0 0 unknown 0.440262686589233 0.438721267131929 0 0 hPsi_site_18969 iPseU_CNN:0;iRNA_PseU:0 18970 chr1 12017006 12017006 1 + G A COAD 12017005 + 12016985 12017025 41 CTCAAGTTTGAAATGGGCCATGTGAGAGCGAGGAACCTGGC CTCAAGTTTGAAATGGGCCATATGAGAGCGAGGAACCTGGC < 41bp 0.431537327469215 0.835937522571818 0.3312794 0.3659075 prediction 0.671875045143636 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12017005 chr1:12017006 nonsynonymous SNV 0.975 3 22 hPsi_associated_SNPs_25246 0 0 1 0 2 Nucleus 0.437937442640521 0.438516174046625 0 0 hPsi_site_18970 iPseU_CNN:0;iRNA_PseU:0 18971 chr1 25669482 25669482 1 + G A COAD 25669481 + 25669461 25669501 41 GGCTGGTGGATTATCATAGATGCAGCTGTTATTTATCCCAC GGCTGGTGGATTATCATAGATACAGCTGTTATTTATCCCAC < 41bp 0.545902186443649 0.881836789203271 0.15997419 0.1968014 prediction 0.671869205519243 Functional Gain - TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25669481 chr1:25669482 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25247 0 0 1 0 2 Ribosome 0.438716725032021 0.438718582287692 0 0 hPsi_site_18971 iPseU_CNN:0;iRNA_PseU:0 18972 chr2 103013240 103013240 1 + C A UCEC 103013239 + 103013219 103013259 41 GGAAGGCCGATAAATCTCTTTCTTATAACTCAAGGTTCTGG GGAAGGCCGATAAATCTCTTTATTATAACTCAAGGTTCTGG < 41bp 0.507621652192163 0.843554868230417 0.27860254 0.35298032 prediction 0.671866432076507 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:103013239 chr2:103013240 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_25248 0 0 0 0 0 Nucleus 0.438718592994408 0.438718592995425 0 0 hPsi_site_18972 iPseU_CNN:0;iRNA_PseU:0 18973 chr1 26581776 26581776 1 + C A UCEC 26581775 + 26581755 26581795 41 CCTCTCCTGCCAAGCCAAATTCTACACCTGTTGGACCCTCT CCTCTCCTGCCAAGCCAAATTATACACCTGTTGGACCCTCT < 41bp 0.516782296871239 0.85271547362062 0.4962345 0.6960467 prediction 0.671866353498762 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26581775 chr1:26581776 nonsynonymous SNV 0.957 2 22 hPsi_associated_SNPs_25249 0 0 1 0 0 Nucleus 0.438594961223661 0.438716735797283 0.3920934 0 hPsi_site_18973 iPseU_CNN:0.3920934;iRNA_PseU:0 18974 chr1 110882431 110882431 1 + C A LUSC 110882430 + 110882410 110882450 41 CCCCGAGCACCAAAAATTCTTCGGGCGGGGGCGAATCGCGC CCCCGAGCACCAAAAATTCTTAGGGCGGGGGCGAATCGCGC < 41bp 0.499846235653831 0.835932768756359 0.14999428 0.26786017 prediction 0.671865537512718 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882430 chr1:110882431 stopgain 0.997 0 22 hPsi_associated_SNPs_25250 0 0 1 0 0 Nucleus 0.438718592995102 0.438718592995102 0 0 hPsi_site_18974 iPseU_CNN:0;iRNA_PseU:0 18975 chrX 47074244 47074244 1 + G A LIHC 47074243 + 47074223 47074263 41 GCGAAAGCTGGGCCGCCACGTGCGGGCGCTGGTGCTTGAGC GCGAAAGCTGGGCCGCCACGTACGGGCGCTGGTGCTTGAGC < 41bp 0.429834424011649 0.835930586404243 0.28933924 0.73079526 prediction 0.671861172808486 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47074243 chrX:47074244 synonymous SNV . 0 22 hPsi_associated_SNPs_25251 0 0 1 0 1 Nucleus 0.436407697798216 0.43866955162281 0.46159052 0 hPsi_site_18975 iPseU_CNN:0.46159052;iRNA_PseU:0 18976 chr20 31620810 31620810 1 + G A HNSC 31620809 + 31620789 31620829 41 GAGGTCCAGAGCGCCATGGATGAGAGTCATATCCTGGAGAA GAGGTCCAGAGCGCCATGGATAAGAGTCATATCCTGGAGAA < 41bp 0.441230895953035 0.835925258202095 0.35503393 0.73929185 prediction 0.671850516404189 Functional Gain - BPIFB6 ENSG00000167104 CDS Human protein_coding chr20:31620809 chr20:31620810 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25252 0 0 0 0 2 unknown 0.438628382699041 0.438280090074378 0.4785837 0 hPsi_site_18976 iPseU_CNN:0.4785837;iRNA_PseU:0 18977 chr15 90138831 90138831 1 + C A UCEC 90138830 + 90138810 90138850 41 GAGGAAGAACACTAAGAAGTTCTAAACCTAAAGGTATTCCT GAGGAAGAACACTAAGAAGTTATAAACCTAAAGGTATTCCT < 41bp 0.496411525010035 0.83592279467196 0.70108116 0.5962038 prediction 0.671845589343921 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90138830 chr15:90138831 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_25253 0 0 1 0 1 chromatin 0.438718593392605 0.438717948954436 0 0 hPsi_site_18977 iPseU_CNN:0;iRNA_PseU:0 18978 chr10 13681734 13681734 1 + G A rs116227661 13681733 + 13681713 13681753 41 GGCGCTGGTTGTGAGGCTGTTGTCTCAGCTCCAGACACATC GGCGCTGGTTGTGAGGCTGTTATCTCAGCTCCAGACACATC < 41bp 0.479687417360406 0.835918161277649 0.35040087 0.8440175 prediction 0.671836322555299 Functional Gain - PRPF18;FRMD4A ENSG00000239665 intronic Human processed_transcript chr10:13681733 chr10:13681734 . . 0 22 hPsi_associated_SNPs_25254 0 0 1 0 0 unknown 0.438716123361312 0.439341161448913 0.688035 0 hPsi_site_18978 iPseU_CNN:0.688035;iRNA_PseU:0 18979 chr1 16060354 16060354 1 + G A LGG 16060353 + 16060333 16060373 41 GAAGAAATTCGAGGATGCCTTGAGCCTCATCCACAGCGCCT GAAGAAATTCGAGGATGCCTTAAGCCTCATCCACAGCGCCT < 41bp 0.548258033045923 0.884176109748229 0.25017223 0.50869685 prediction 0.671836153404612 Functional Gain - PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16060353 chr1:16060354 synonymous SNV . 0 22 hPsi_associated_SNPs_25255 0 0 1 0 1 chromatin 0.438699246187291 0.438718239946783 0.0173937 0 hPsi_site_18979 iPseU_CNN:0.0173937;iRNA_PseU:0 18980 chr12 53666555 53666555 1 + G A COAD 53666554 + 53666534 53666574 41 TTCTATAGTCACAAGCTCTATGCCGAGGCCTGTGCCATCTC TTCTATAGTCACAAGCTCTATACCGAGGCCTGTGCCATCTC < 41bp 0.431004216646636 0.835917655264527 0.37821123 0.84059536 prediction 0.671835310529054 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53666554 chr12:53666555 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_25256 0 0 1 0 2 Nucleus 0.43665351048496 0.438562886651775 0.68119072 0 hPsi_site_18980 iPseU_CNN:0.68119072;iRNA_PseU:0 18981 chr14 20586080 20586080 1 + G A LUAD 20586079 + 20586059 20586099 41 CCATCATGAACAAGAAGGTATGTGTTTTGCTTGTAGTGACC CCATCATGAACAAGAAGGTATATGTTTTGCTTGTAGTGACC < 41bp 0.457032490890139 0.835914429257402 0.60675 0.58591837 prediction 0.671828858514804 Functional Gain - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20586079 chr14:20586080 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25257 0 0 0 0 0 unknown 0.438778265001808 0.438747977128149 0 0 hPsi_site_18981 iPseU_CNN:0;iRNA_PseU:0 18982 chr1 28167695 28167695 1 + G A BLCA 28167694 + 28167674 28167714 41 GAGAAGATGGGTGGAGAGGATGATGAACTCAAGGGCTTACT GAGAAGATGGGTGGAGAGGATAATGAACTCAAGGGCTTACT < 41bp 0.438977868208281 0.835907401909482 0.30936918 0.65987605 prediction 0.671814803818965 Functional Gain - PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28167694 chr1:28167695 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25258 0 0 1 0 1 Ribosome 0.438718592916367 0.438718594480334 0.3197521 0 hPsi_site_18982 iPseU_CNN:0.3197521;iRNA_PseU:0 18983 chr1 64101965 64101965 1 + G A ESCA 64101964 + 64101944 64101984 41 AACCCTTCAGACTCTGTGGCTGTCATTGCTGCCAACATCTT AACCCTTCAGACTCTGTGGCTATCATTGCTGCCAACATCTT < 41bp 0.566162977012948 0.902067435511611 0.1906206 0.60626227 prediction 0.671808916997326 Functional Gain - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64101964 chr1:64101965 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25259 0 0 1 0 2 Ribosome 0.438723611773068 0.438719590355232 0.21252454 0 hPsi_site_18983 iPseU_CNN:0.21252454;iRNA_PseU:0 18984 chr6 90604304 90604304 1 + G A UCEC 90604303 + 90604283 90604323 41 CCGAATGCTGGTACTTCGTGTGGCTGCTGAGGATGTCTGGG CCGAATGCTGGTACTTCGTGTAGCTGCTGAGGATGTCTGGG < 41bp 0.547703273551486 0.883603607791121 0.18375957 0.22791934 prediction 0.671800668479271 Functional Gain - GJA10 ENSG00000135355 CDS Human protein_coding chr6:90604303 chr6:90604304 synonymous SNV . 0 22 hPsi_associated_SNPs_25260 0 0 0 0 0 unknown 0.438718130884063 0.438594034655395 0 0 hPsi_site_18984 iPseU_CNN:0;iRNA_PseU:0 18985 chr1 156212025 156212025 1 + G A BLCA 156212024 + 156212004 156212044 41 GCGCAGCCACCGAGACACCATGAGAGCCCTCACACTCCTCG GCGCAGCCACCGAGACACCATAAGAGCCCTCACACTCCTCG < 41bp 0.543878626198158 0.879777305985263 0.32039714 0.4152195 prediction 0.67179735957421 Functional Gain - BGLAP ENSG00000242252 CDS Human protein_coding chr1:156212024 chr1:156212025 nonsynonymous SNV 0.146 3 22 hPsi_associated_SNPs_25261 0 0 0 0 1 exosome 0.438671954865404 0.43872466220993 0 0 hPsi_site_18985 iPseU_CNN:0;iRNA_PseU:0 18986 chr20 34022013 34022013 1 + G A LGG 34022012 + 34021992 34022032 41 GACATGCAGTGCCTTCCGACTGCAGCGAGCCTTAAGGTTCT GACATGCAGTGCCTTCCGACTACAGCGAGCCTTAAGGTTCT < 41bp 0.547123718275202 0.883015040090353 0.276021 0.6362533 prediction 0.671782643630302 Functional Gain - GDF5;GDF5OS ENSG00000125965;ENSG00000204183 CDS Human other chr20:34022012 chr20:34022013 synonymous SNV . 0 22 hPsi_associated_SNPs_25262 0 0 0 0 0 unknown 0.438718995077026 0.43871250153403 0.2725066 0 hPsi_site_18986 iPseU_CNN:0.2725066;iRNA_PseU:0 18987 chr21 43708058 43708058 1 + C A COAD 43708057 + 43708037 43708077 41 AGTCGGCTGGTGAGAGCGGTTCGGGAGGGCATGTGTGACTC AGTCGGCTGGTGAGAGCGGTTAGGGAGGGCATGTGTGACTC < 41bp 0.474003527273364 0.83588986475992 0.27365345 0.43766928 prediction 0.671779729519839 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43708057 chr21:43708058 synonymous SNV . 0 22 hPsi_associated_SNPs_25263 0 0 0 0 2 Cytosol 0.438668376866386 0.438718080886088 0 0 hPsi_site_18987 iPseU_CNN:0;iRNA_PseU:0 18988 chr11 128781414 128781414 1 + G A SKCM 128781413 + 128781393 128781433 41 TGACCTCTTCACCACCCTGGTGGACCTCAAGTGGCGCTTCA TGACCTCTTCACCACCCTGGTAGACCTCAAGTGGCGCTTCA < 41bp 0.417505553466913 0.835884136231171 0.25696003 0.39044613 prediction 0.671768272462341 Functional Gain - KCNJ5 ENSG00000120457 CDS Human protein_coding chr11:128781413 chr11:128781414 synonymous SNV . 0 22 hPsi_associated_SNPs_25264 0 0 0 0 0 Ribosome 0.43871636706822 0.43857517741032 0 0 hPsi_site_18988 iPseU_CNN:0;iRNA_PseU:0 18989 chr5 147820008 147820008 1 + C A COAD 147820007 + 147819987 147820027 41 AGAGCTCATTAAATATGAATTCTTCCCTGAAGCCACTCGAA AGAGCTCATTAAATATGAATTATTCCCTGAAGCCACTCGAA < 41bp 0.50685410267912 0.842735914341087 0.3703004 0.70700145 prediction 0.671763623323934 Functional Gain - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820007 chr5:147820008 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25265 0 0 1 0 2 Ribosome 0.438717464174692 0.438718593408472 0.4140029 0 hPsi_site_18989 iPseU_CNN:0.4140029;iRNA_PseU:0 18990 chr16 30778146 30778146 1 + G A CESC 30778145 + 30778125 30778165 41 GCCCAGGTACGCAAGGAGTATGAGATGCTGCGCATCGAGTT GCCCAGGTACGCAAGGAGTATAAGATGCTGCGCATCGAGTT < 41bp 0.42697371335488 0.835881722932092 0.3421099 0.6784002 prediction 0.671763445864184 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30778145 chr16:30778146 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_25266 0 0 1 0 2 Ribosome 0.4387185055868 0.438718592973206 0.3568004 0 hPsi_site_18990 iPseU_CNN:0.3568004;iRNA_PseU:0 18991 chr6 26505205 26505205 1 + C A UCEC 26505204 + 26505184 26505224 41 AGTTCAAGAGAATGGAGAAATCTGTCTGGAGTGCACCTCAG AGTTCAAGAGAATGGAGAAATATGTCTGGAGTGCACCTCAG < 41bp 0.483824626701363 0.835871410593955 0.2079466 0.3352207 prediction 0.671742821187909 Functional Gain - BTN1A1 ENSG00000124557 CDS Human protein_coding chr6:26505204 chr6:26505205 synonymous SNV . 0 22 hPsi_associated_SNPs_25267 0 0 0 0 1 nucleoplasm 0.438724698038895 0.438287376146767 0 0 hPsi_site_18991 iPseU_CNN:0;iRNA_PseU:0 18992 chr1 47501529 47501529 1 + G A SKCM 47501528 + 47501508 47501548 41 GACACAAGCGTGGAGGTCTATGAGCACATCAACTCGATGTC GACACAAGCGTGGAGGTCTATAAGCACATCAACTCGATGTC < 41bp 0.422514405364628 0.835869326298593 0.48127663 0.65044403 prediction 0.671738652597185 Functional Gain - CYP4X1 ENSG00000186377 CDS Human protein_coding chr1:47501528 chr1:47501529 nonsynonymous SNV 0.289 1 22 hPsi_associated_SNPs_25268 0 0 0 0 2 Ribosome 0.436963425231344 0.438730924019682 0.30088806 0 hPsi_site_18992 iPseU_CNN:0.30088806;iRNA_PseU:0 18993 chr5 140604625 140604625 1 + C A LUAD 140604624 + 140604604 140604644 41 CAATGGCCACCTGTTTGCCCTCAGGTCGCTGGACTACGAGG CAATGGCCACCTGTTTGCCCTAAGGTCGCTGGACTACGAGG < 41bp 0.483908760077636 0.835853185816298 0.31217444 0.49619213 prediction 0.671706371632597 Functional Gain - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140604624 chr5:140604625 synonymous SNV . 0 22 hPsi_associated_SNPs_25269 0 0 1 0 0 exosome 0.438718535623217 0.438718687109494 0 0 hPsi_site_18993 iPseU_CNN:0;iRNA_PseU:0 18994 chr19 6904148 6904148 1 + C A LUSC 6904147 + 6904127 6904167 41 GGCTGCATTGCAGGCTTTCATCCCAATCCAGAAGGCTCCCA GGCTGCATTGCAGGCTTTCATACCAATCCAGAAGGCTCCCA < 41bp 0.478466924384871 0.835851297666388 0.23333657 0.58735406 prediction 0.671702595332776 Functional Gain - ADGRE1 ENSG00000174837 CDS Human protein_coding chr19:6904147 chr19:6904148 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25270 0 0 0 0 1 exosome 0.438718592995102 0.438718564816465 0.17470812 0 hPsi_site_18994 iPseU_CNN:0.17470812;iRNA_PseU:0 18995 chr8 75941685 75941685 1 + G A LUAD 75941684 + 75941664 75941704 41 CGAAATCACGGTGGTTATGTTGATGTAATGCCTGTGGACAA CGAAATCACGGTGGTTATGTTAATGTAATGCCTGTGGACAA < 41bp 0.438878659032884 0.835842240212841 0.5077909 0.7986039 prediction 0.671684480425683 Functional Gain - CRISPLD1 ENSG00000121005 CDS Human protein_coding chr8:75941684 chr8:75941685 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_25271 0 0 1 0 2 Ribosome 0.438716678204047 0.438715694401141 0.581626 0 hPsi_site_18995 iPseU_CNN:0.581626;iRNA_PseU:0 18996 chr4 48485929 48485929 1 + G A UCEC 48485928 + 48485908 48485948 41 CGCCGCCCTGTGCATCACCATGCTGGGCCTGGGCTGCACGG CGCCGCCCTGTGCATCACCATACTGGGCCTGGGCTGCACGG < 41bp 0.438041364093651 0.835840257134582 0.33326125 0.71904945 prediction 0.671680514269164 Functional Gain - SLC10A4 ENSG00000145248 CDS Human protein_coding chr4:48485928 chr4:48485929 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25272 0 0 0 0 0 exosome 0.438230936801628 0.431053818084535 0.4380989 0 hPsi_site_18996 iPseU_CNN:0.4380989;iRNA_PseU:0 18997 chr2 71827952 71827952 1 + G A SKCM 71827951 + 71827931 71827971 41 GGGGAGCTGCTGGCCTCTTTTGAGCTCATCCAGAGAGAGAA GGGGAGCTGCTGGCCTCTTTTAAGCTCATCCAGAGAGAGAA < 41bp 0.48504580783503 0.835828601597881 0.27089167 0.30828202 prediction 0.671657203195761 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71827951 chr2:71827952 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_25273 0 0 0 0 1 Nucleus 0.438718394697945 0.438718582952081 0 0 hPsi_site_18997 iPseU_CNN:0;iRNA_PseU:0 18998 chr16 2086770 2086770 1 + G A SKCM 2086769 + 2086749 2086789 41 GGGACTGCGCCATGCTGAGGTGGTGGCCAGCATCAAGGCAC GGGACTGCGCCATGCTGAGGTAGTGGCCAGCATCAAGGCAC < 41bp 0.435361612881461 0.835828124469439 0.23490882 0.64263046 prediction 0.671656248938879 Functional Gain - SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2086769 chr16:2086770 synonymous SNV . 0 22 hPsi_associated_SNPs_25274 0 0 1 0 1 Ribosome 0.43868703312999 0.438306593485588 0.28526092 0 hPsi_site_18998 iPseU_CNN:0.28526092;iRNA_PseU:0 18999 chr16 22161162 22161162 1 + G A HNSC 22161161 + 22161141 22161181 41 GTCATGGCAGGACACGCTGGTGGAGACCACAGATGCAGCGT GTCATGGCAGGACACGCTGGTAGAGACCACAGATGCAGCGT < 41bp 0.4129157704177 0.835827741068783 0.24491057 0.68086845 prediction 0.671655482137567 Functional Gain - VWA3A ENSG00000175267 CDS Human protein_coding chr16:22161161 chr16:22161162 synonymous SNV . 0 22 hPsi_associated_SNPs_25275 0 0 0 0 1 Endoplasmic reticulum 0.438352592084672 0.427513138172736 0.3617369 0 hPsi_site_18999 iPseU_CNN:0.3617369;iRNA_PseU:0 19000 chr14 50246355 50246355 1 + G A UCEC 50246354 + 50246334 50246374 41 GCTGCCCATGCCTGTGCAACTGTCGGAAATAGAGGCTTCGT GCTGCCCATGCCTGTGCAACTATCGGAAATAGAGGCTTCGT < 41bp 0.426050137419116 0.835826199802729 0.35297686 0.63582766 prediction 0.671652399605458 Functional Gain - KLHDC2 ENSG00000165516 CDS Human protein_coding chr14:50246354 chr14:50246355 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25276 0 0 1 0 1 Cytosol 0.43874257799971 0.438814610825069 0.27165532 0 hPsi_site_19000 iPseU_CNN:0.27165532;iRNA_PseU:0 19001 chr19 6821654 6821654 1 + C A UCEC 6821653 + 6821633 6821673 41 GTCATCTACACCCTGTCTGCTCTGTCCTGGACCCCGATCGC GTCATCTACACCCTGTCTGCTATGTCCTGGACCCCGATCGC < 41bp 0.533740640757934 0.869558466059618 0.19758177 0.45601466 prediction 0.671635650603366 Functional Gain - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6821653 chr19:6821654 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25277 0 0 0 0 2 Endoplasmic reticulum 0.438718451458704 0.438718296771157 0 0 hPsi_site_19001 iPseU_CNN:0;iRNA_PseU:0 19002 chr19 44612276 44612276 1 + G A BLCA 44612275 + 44612255 44612295 41 GTAGAAAAGCCATACAAATGTGAGGACTGTGGGAAGGGCTA GTAGAAAAGCCATACAAATGTAAGGACTGTGGGAAGGGCTA < 41bp 0.462331531883971 0.835817636924871 0.2818452 0.27248305 prediction 0.671635273849742 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612275 chr19:44612276 nonsynonymous SNV 0.980 1 22 hPsi_associated_SNPs_25278 0 0 1 0 0 nucleus 0.438718607990304 0.438718558770493 0 0 hPsi_site_19002 iPseU_CNN:0;iRNA_PseU:0 19003 chr9 5765691 5765691 1 + C A CESC 5765690 + 5765670 5765710 41 TTCAAGTGGTGGATTTGAGTTCTTCAGGAATCGAAGCATCA TTCAAGTGGTGGATTTGAGTTATTCAGGAATCGAAGCATCA < 41bp 0.488799293703765 0.835817326702475 0.3283872 0.2952174 prediction 0.671634653404949 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5765690 chr9:5765691 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25279 0 0 1 0 1 Nucleus 0.438688333416383 0.439063565645771 0 0 hPsi_site_19003 iPseU_CNN:0;iRNA_PseU:0 19004 chr11 62382195 62382195 1 + G A rs141919268 62382194 + 62382174 62382214 41 CAGGGCTATCTCTTTCCCAGTGGGCTGAAAGATATGCTGAA CAGGGCTATCTCTTTCCCAGTAGGCTGAAAGATATGCTGAA < 41bp 0.432680053333841 0.835816744904688 0.20696789 0.30655146 prediction 0.671633489809376 Functional Gain - ROM1 ENSG00000149489 CDS Human protein_coding chr11:62382194 chr11:62382195 nonsynonymous SNV 0.962 3 22 hPsi_associated_SNPs_25280 1 0 0 0 0 Endoplasmic reticulum 0.443050768628165 0.438718610590303 0 0 hPsi_site_19004 iPseU_CNN:0;iRNA_PseU:0 19005 chrX 78216927 78216927 1 + C A COAD 78216926 + 78216906 78216946 41 TGCTGCCTTTTGGATCCAATTCTTTATTACTTTATGGCTTC TGCTGCCTTTTGGATCCAATTATTTATTACTTTATGGCTTC < 41bp 0.505381214767892 0.841197853162517 0.25607407 0.25152928 prediction 0.671633276789251 Functional Gain - P2RY10 ENSG00000078589 CDS Human protein_coding chrX:78216926 chrX:78216927 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_25281 0 0 0 0 0 exosome 0.438718437303818 0.438718356658222 0 0 hPsi_site_19005 iPseU_CNN:0;iRNA_PseU:0 19006 chr12 56661633 56661633 1 + G A UCEC 56661632 + 56661612 56661652 41 GCTGCCCAGATCTTGGCGGCTGAGGCTGGCTTACCTTCGAG GCTGCCCAGATCTTGGCGGCTAAGGCTGGCTTACCTTCGAG < 41bp 0.564146791550139 0.899957614807702 0.25175357 0.6479595 prediction 0.671621646515126 Functional Gain - COQ10A ENSG00000135469 CDS Human protein_coding chr12:56661632 chr12:56661633 nonsynonymous SNV 0.581 0 22 hPsi_associated_SNPs_25282 0 0 1 0 2 chromatin 0.438718592987013 0.438718592995102 0.295919 0 hPsi_site_19006 iPseU_CNN:0.295919;iRNA_PseU:0 19007 chr19 14020651 14020651 1 + G A COAD 14020650 + 14020630 14020670 41 CCCTAGCTGGGCCTGCTGGTTGACCTCTCCCCAGATGGCCT CCCTAGCTGGGCCTGCTGGTTAACCTCTCCCCAGATGGCCT < 41bp 0.42978400134314 0.835808776288884 0.308923 0.67827934 prediction 0.671617552577768 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020650 chr19:14020651 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25283 0 0 1 0 1 chromatin 0.438719380714325 0.438696627868422 0.35655868 0 hPsi_site_19007 iPseU_CNN:0.35655868;iRNA_PseU:0 19008 chr11 4470635 4470635 1 + G A SKCM 4470634 + 4470614 4470654 41 GTTGGTGGGGATTCCAGGCCTGGAACACCTGCACATCTGGA GTTGGTGGGGATTCCAGGCCTAGAACACCTGCACATCTGGA < 41bp 0.542772026128365 0.878573656621037 0.24689618 0.33011523 prediction 0.671603260985346 Functional Gain - OR52K2 ENSG00000181963 CDS Human protein_coding chr11:4470634 chr11:4470635 synonymous SNV . 0 22 hPsi_associated_SNPs_25284 0 0 0 0 0 exosome 0.438718752492281 0.43871302209828 0 0 hPsi_site_19008 iPseU_CNN:0;iRNA_PseU:0 19009 chr2 105859407 105859407 1 + G A KIRC 105859406 + 105859386 105859426 41 CCAGCCAAGCACAGTCTACGTGTGCAATGAAAACCAGTCTG CCAGCCAAGCACAGTCTACGTATGCAATGAAAACCAGTCTG < 41bp 0.455107121089974 0.835801563531815 0.24368563 0.33684212 prediction 0.671603127063631 Functional Gain - GPR45 ENSG00000135973 CDS Human protein_coding chr2:105859406 chr2:105859407 synonymous SNV . 0 22 hPsi_associated_SNPs_25285 0 0 0 0 0 unknown 0.438718591914313 0.438718593425446 0 0 hPsi_site_19009 iPseU_CNN:0;iRNA_PseU:0 19010 chr8 10532236 10532236 1 + C A UCEC 10532235 + 10532215 10532255 41 GAGAGACTCCCGGAGGAGCATCCTGCTGGACACCCTCTACG GAGAGACTCCCGGAGGAGCATACTGCTGGACACCCTCTACG < 41bp 0.477556883188562 0.835799151148019 0.25368297 0.47217917 prediction 0.671598302296038 Functional Gain - C8orf74 ENSG00000171060 CDS Human protein_coding chr8:10532235 chr8:10532236 synonymous SNV . 0 22 hPsi_associated_SNPs_25286 0 0 0 1 1 unknown 0.438718642767993 0.438719895723044 0 0 hPsi_site_19010 iPseU_CNN:0;iRNA_PseU:0 19011 chr6 47775994 47775994 1 + C A LUSC 47775993 + 47775973 47776013 41 AGACTCCATTCCCATACAGCTCTCTGTGGTGCCAACCCTAC AGACTCCATTCCCATACAGCTATCTGTGGTGCCAACCCTAC < 41bp 0.52595065446766 0.861749471530946 0.3888198 0.6625958 prediction 0.671597634126573 Functional Gain - OPN5 ENSG00000124818 CDS Human protein_coding chr6:47775993 chr6:47775994 synonymous SNV . 0 22 hPsi_associated_SNPs_25287 0 0 0 0 0 exosome 0.438718596489661 0.438718707250034 0.3251916 0 hPsi_site_19011 iPseU_CNN:0.3251916;iRNA_PseU:0 19012 chr11 15134092 15134092 1 + C A BLCA 15134091 + 15134071 15134111 41 GTCTATGGGGAGTCCAGGAGTCCAGGAGGCTGTGCTGTGCC GTCTATGGGGAGTCCAGGAGTACAGGAGGCTGTGCTGTGCC < 41bp 0.509739874355077 0.845537407663044 0.28475094 0.31296116 prediction 0.671595066615934 Functional Gain - INSC ENSG00000188487 CDS Human protein_coding chr11:15134091 chr11:15134092 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_25288 0 0 1 0 1 exosome 0.438718596577959 0.438719055379171 0 0 hPsi_site_19012 iPseU_CNN:0;iRNA_PseU:0 19013 chr15 59416096 59416096 1 + G A rs28383555 59416095 + 59416075 59416115 41 TCAACCAGTCGGTTACTCAATGTATTGAATTACTCTGTGCT TCAACCAGTCGGTTACTCAATATATTGAATTACTCTGTGCT < 41bp 0.477329797171864 0.835795934125068 0.28532434 0.26039857 prediction 0.671591868250137 Functional Gain - CCNB2 ENSG00000259732 ncRNA_intronic Human sense_overlapping chr15:59416095 chr15:59416096 . . 0 22 hPsi_associated_SNPs_25289 0 0 0 0 0 Ribosome 0.438746511196183 0.438722623617004 0 0 hPsi_site_19013 iPseU_CNN:0;iRNA_PseU:0 19014 chr1 16357035 16357035 1 + G A rs56095526 16357034 + 16357014 16357054 41 TGAGCTGACCGGCCAGATAGTGCATGCACTGCCCGTGCTGA TGAGCTGACCGGCCAGATAGTACATGCACTGCCCGTGCTGA < 41bp 0.560588860853694 0.896377303907175 0.26191583 0.35391706 prediction 0.671576886106964 Functional Gain - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16357034 chr1:16357035 synonymous SNV . 0 22 hPsi_associated_SNPs_25290 0 0 0 0 1 Endoplasmic reticulum 0.438699307815933 0.438705371560199 0 0 hPsi_site_19014 iPseU_CNN:0;iRNA_PseU:0 19015 chr15 34640339 34640339 1 + G A LUAD 34640338 + 34640318 34640358 41 CTCTCCAGACAACCCTCTGATGCTCTCTGCTTTCCCCAGCT CTCTCCAGACAACCCTCTGATACTCTCTGCTTTCCCCAGCT < 41bp 0.416415612086174 0.835783631687763 0.27327108 0.66228575 prediction 0.671567263375526 Functional Gain - NUTM1 ENSG00000184507 CDS Human protein_coding chr15:34640338 chr15:34640339 nonsynonymous SNV 0.893 0 22 hPsi_associated_SNPs_25291 0 0 0 0 0 exosome 0.438718593008706 0.438718593000419 0.3245715 0 hPsi_site_19015 iPseU_CNN:0.3245715;iRNA_PseU:0 19016 chr4 39246126 39246126 1 + C A UCEC 39246125 + 39246105 39246145 41 GCCCAACTGTATGAAAAAGGTCTCTACTACGATAAAGCAGC GCCCAACTGTATGAAAAAGGTATCTACTACGATAAAGCAGC < 41bp 0.506993516348596 0.842766849804825 0.24691108 0.70898193 prediction 0.671546666912459 Functional Gain - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39246125 chr4:39246126 nonsynonymous SNV 0.788 1 22 hPsi_associated_SNPs_25292 0 0 1 0 2 Cytosol 0.438718597285564 0.438718593803129 0.41796386 0 hPsi_site_19016 iPseU_CNN:0.41796386;iRNA_PseU:0 19017 chr11 58391702 58391702 1 + G A UCEC 58391701 + 58391681 58391721 41 CATTTTACCCCAACCGAAGGTGACTTCCATCAAGCTATACA CATTTTACCCCAACCGAAGGTAACTTCCATCAAGCTATACA < 41bp 0.431563219129171 0.835764518140186 0.3257187 0.7304811 prediction 0.671529036280372 Functional Gain - CNTF ENSG00000242689 CDS Human protein_coding chr11:58391701 chr11:58391702 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_25293 0 0 1 1 0 Cytosol 0.438716114131303 0.438390261615251 0.4609622 0 hPsi_site_19017 iPseU_CNN:0.4609622;iRNA_PseU:0 19018 chr2 25039609 25039609 1 + C A OV 25039608 + 25039588 25039628 41 AACTGGATCCAGGGGGTCAGTCCTTCCCGTTCTGTGCTAGA AACTGGATCCAGGGGGTCAGTACTTCCCGTTCTGTGCTAGA < 41bp 0.475743457964517 0.835754849852285 0.24712685 0.69216615 prediction 0.671509699704571 Functional Gain - CENPO ENSG00000138092 CDS Human protein_coding chr2:25039608 chr2:25039609 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_25294 0 0 1 0 1 Ribosome 0.438718593583919 0.438718581572256 0.3843323 0 hPsi_site_19018 iPseU_CNN:0.3843323;iRNA_PseU:0 19019 chr10 50916449 50916449 1 + C A UCEC 50916448 + 50916428 50916468 41 ACAAGAGGACCACCAGCAGCTCCAGGCTGACATTTCACCAG ACAAGAGGACCACCAGCAGCTACAGGCTGACATTTCACCAG < 41bp 0.500158516307388 0.835908818191657 0.2839271 0.5341425 prediction 0.671500603768538 Functional Gain - C10orf53 ENSG00000178645 CDS Human protein_coding chr10:50916448 chr10:50916449 nonsynonymous SNV 0.318 1 22 hPsi_associated_SNPs_25295 0 0 0 0 1 unknown 0.438735955369854 0.438719248646889 0.0682849999999999 0 hPsi_site_19019 iPseU_CNN:0.0682849999999999;iRNA_PseU:0 19020 chr11 61404877 61404877 1 + C A LUSC 61404876 + 61404856 61404896 41 ATCAGTGCCCCATTCTATCATCGACGGGTACAAACGAGTCC ATCAGTGCCCCATTCTATCATAGACGGGTACAAACGAGTCC < 41bp 0.484356662759441 0.83573398506228 0.14996874 0.22247553 prediction 0.67146797012456 Functional Gain - RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404876 chr11:61404877 . . 0 22 hPsi_associated_SNPs_25296 0 0 0 0 0 unknown 0.438950440373909 0.438716521675701 0 0 hPsi_site_19020 iPseU_CNN:0;iRNA_PseU:0 19021 chr16 30965051 30965051 1 + G A UCEC 30965050 + 30965030 30965070 41 CATGGTACCCGTGGGGCTCGTGTTTGTGGCCTTTGCCCTGC CATGGTACCCGTGGGGCTCGTATTTGTGGCCTTTGCCCTGC < 41bp 0.560722769761277 0.896454660100623 0.17510477 0.5288191 prediction 0.671463780678691 Functional Gain - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30965050 chr16:30965051 synonymous SNV . 0 22 hPsi_associated_SNPs_25297 0 0 1 0 0 chromatin 0.438718592968961 0.438718592993377 0.0576382 0 hPsi_site_19021 iPseU_CNN:0.0576382;iRNA_PseU:0 19022 chr14 100182173 100182173 1 + C A LUSC 100182172 + 100182152 100182192 41 GCCAGGGAAGAGGAAGCAGCTCCGGGAGGTCCGGGAGAGCA GCCAGGGAAGAGGAAGCAGCTACGGGAGGTCCGGGAGAGCA < 41bp 0.489917935736376 0.835713962612003 0.3273484 0.68913865 prediction 0.671427925224006 Functional Gain - CYP46A1 ENSG00000036530 CDS Human protein_coding chr14:100182172 chr14:100182173 synonymous SNV . 0 22 hPsi_associated_SNPs_25298 0 0 0 0 1 exosome 0.438718591711425 0.438718521966913 0.3782773 0 hPsi_site_19022 iPseU_CNN:0.3782773;iRNA_PseU:0 19023 chr3 122808042 122808042 1 + G A UCEC 122808041 + 122808021 122808061 41 CTGCCATCATGGCTGTCCTCTGCAAAGGTCTCCTCGCTCAT CTGCCATCATGGCTGTCCTCTACAAAGGTCTCCTCGCTCAT < 41bp 0.424103906903263 0.835712288507611 0.35213017 0.44758546 prediction 0.671424577015223 Functional Gain - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122808041 chr3:122808042 nonsynonymous SNV 0.450 0 22 hPsi_associated_SNPs_25299 0 0 1 0 2 Endoplasmic reticulum 0.438718592975806 0.438718590997813 0 0 hPsi_site_19023 iPseU_CNN:0;iRNA_PseU:0 19024 chr3 184025249 184025249 1 + C A READ 184025248 + 184025228 184025268 41 CCTGGATACCCTAAGCAAATTCTCTCATGATGCTGATCCAG CCTGGATACCCTAAGCAAATTATCTCATGATGCTGATCCAG < 41bp 0.518281198268603 0.853993472653835 0.41764435 0.5650207 prediction 0.671424548770466 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184025248 chr3:184025249 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25300 0 0 1 0 1 Ribosome 0.438718599669187 0.438794502363464 0.1300414 0 hPsi_site_19024 iPseU_CNN:0.1300414;iRNA_PseU:0 19025 chr6 45514984 45514984 1 + C A UCEC 45514983 + 45514963 45515003 41 CTGATGGAAGCCACAGCAGTTCCCCAACTGTTTTGAATTCT CTGATGGAAGCCACAGCAGTTACCCAACTGTTTTGAATTCT < 41bp 0.501352979200471 0.83706463402962 0.26661462 0.37383956 prediction 0.671423309658297 Functional Gain - RUNX2 ENSG00000124813 CDS Human protein_coding chr6:45514983 chr6:45514984 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25301 0 0 1 0 0 Cytosol 0.438718943131036 0.438715158468309 0 0 hPsi_site_19025 iPseU_CNN:0;iRNA_PseU:0 19026 chr11 112042538 112042538 1 + G A LUSC 112042537 + 112042517 112042557 41 TCTTACATTGATGAGATAGATGAACTCTTCAAAGAAGCCAA TCTTACATTGATGAGATAGATAAACTCTTCAAAGAAGCCAA < 41bp 0.528190216269402 0.863894730199098 0.33976704 0.7778302 prediction 0.671409027859392 Functional Gain - TEX12 ENSG00000150783 CDS Human protein_coding chr11:112042537 chr11:112042538 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25302 0 0 1 0 1 exosome 0.438415263073921 0.438718592948189 0.5556604 0 hPsi_site_19026 iPseU_CNN:0.5556604;iRNA_PseU:0 19027 chr16 67231533 67231533 1 + C A UCEC 67231532 + 67231512 67231552 41 CCCCAAAGAGCTGTCAGAAATCTTTGATCCCACACGAGGTA CCCCAAAGAGCTGTCAGAAATATTTGATCCCACACGAGGTA < 41bp 0.478043154560325 0.835701648475486 0.56761026 0.7070161 prediction 0.671403296950973 Functional Gain - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67231532 chr16:67231533 synonymous SNV . 0 22 hPsi_associated_SNPs_25303 0 0 1 0 2 Cytosol 0.438721335609768 0.438656136750158 0.27881168 0 hPsi_site_19027 iPseU_CNN:0.27881168;iRNA_PseU:0 19028 chr3 111667872 111667872 1 + G A UCEC 111667871 + 111667851 111667891 41 CCTGCTGATGCTGATGCTGTTGCCACTGAGCCTGCCACAGC CCTGCTGATGCTGATGCTGTTACCACTGAGCCTGCCACAGC < 41bp 0.441291709169487 0.835701076265506 0.35345072 0.6820291 prediction 0.671402152531011 Functional Gain - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111667871 chr3:111667872 nonsynonymous SNV 0.959 0 22 hPsi_associated_SNPs_25304 0 0 1 0 2 cytosol 0.438768450504549 0.438746418508525 0.3640582 0 hPsi_site_19028 iPseU_CNN:0.3640582;iRNA_PseU:0 19029 chr5 140084042 140084042 1 + G A GBM 140084041 + 140084021 140084061 41 CCTGGGCATGTCTATGCGTGTGGAACGTTCCACCCTGGATC CCTGGGCATGTCTATGCGTGTAGAACGTTCCACCCTGGATC < 41bp 0.448114420071438 0.835699731416899 0.365129 0.69707745 prediction 0.671399462833797 Functional Gain - ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084041 chr5:140084042 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25305 0 0 1 0 1 Ribosome 0.438719190869863 0.438718340022346 0.3941549 0 hPsi_site_19029 iPseU_CNN:0.3941549;iRNA_PseU:0 19030 chr21 38877823 38877823 1 + G A STAD 38877822 + 38877802 38877842 41 GGTACAAATACAAGTAATAGTGTATCTACAAGCCCCGCCAT GGTACAAATACAAGTAATAGTATATCTACAAGCCCCGCCAT < 41bp 0.438010065808629 0.835698475693205 0.26311547 0.33811074 prediction 0.671396951386411 Functional Gain - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38877822 chr21:38877823 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_25306 0 0 1 0 1 Cytosol 0.438718592995652 0.438718592995136 0 0 hPsi_site_19030 iPseU_CNN:0;iRNA_PseU:0 19031 chr6 132891697 132891697 1 + C A OV 132891696 + 132891676 132891716 41 CTCTCTGGCCTGCGCTGATTTCTTGGTGGGTGTGACTGTGA CTCTCTGGCCTGCGCTGATTTATTGGTGGGTGTGACTGTGA < 41bp 0.507202630251607 0.842900541491652 0.2529307 0.3868642 prediction 0.67139582248009 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891696 chr6:132891697 nonsynonymous SNV 0.031 0 22 hPsi_associated_SNPs_25307 0 0 0 0 0 unknown 0.438651134070403 0.438648903048711 0 0 hPsi_site_19031 iPseU_CNN:0;iRNA_PseU:0 19032 chr11 67049408 67049408 1 + C A STAD 67049407 + 67049387 67049427 41 CATGCACAACCGCTTCGTGGTCTACCGGGACCTGAAGGTGA CATGCACAACCGCTTCGTGGTATACCGGGACCTGAAGGTGA < 41bp 0.478176458276544 0.835696481250389 0.48377538 0.8784108 prediction 0.671392962500778 Functional Gain - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67049407 chr11:67049408 synonymous SNV . 0 22 hPsi_associated_SNPs_25308 0 0 1 0 1 chromatin 0.409231307801246 0.43938621701041 0.7568216 0 hPsi_site_19032 iPseU_CNN:0.7568216;iRNA_PseU:0 19033 chr7 143029909 143029909 1 + G A OV 143029908 + 143029888 143029928 41 GAGCCTGGGCCAGTCAGCTGTGTGGATTCACCCCCGGGTCA GAGCCTGGGCCAGTCAGCTGTATGGATTCACCCCCGGGTCA < 41bp 0.569495698202818 0.905178670612476 0.7387543 0.7807025 prediction 0.671365944819315 Functional Gain - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143029908 chr7:143029909 synonymous SNV . 0 22 hPsi_associated_SNPs_25309 0 0 0 0 2 exosome 0.438462366268725 0.43873147152429 0.0838964 0 hPsi_site_19033 iPseU_CNN:0.0838964;iRNA_PseU:0 Positive affect 19034 chr16 31201394 31201394 1 + C A BLCA 31201393 + 31201373 31201413 41 CCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCA CCGGAAATCCTATCAAGGTCTAATTTGCTACTCGCCGGGCA < 41bp 0.527009422673623 0.862689638805592 0.24599338 0.5185077 prediction 0.67136043226394 Functional Gain - FUS ENSG00000089280 CDS Human protein_coding chr16:31201393 chr16:31201394 stopgain 0.997 0 22 hPsi_associated_SNPs_25310 0 0 1 0 2 Cytosol 0.438711883253177 0.438700167728631 0.0370154 0 hPsi_site_19034 iPseU_CNN:0.0370154;iRNA_PseU:0 19035 chr15 68124619 68124619 1 + G A BRCA 68124618 + 68124598 68124638 41 TTCCCCTTTCACAGAGGAATTGCAAAAACTGCTCCTGGAAC TTCCCCTTTCACAGAGGAATTACAAAAACTGCTCCTGGAAC < 41bp 0.43526594017639 0.835674541749312 0.49366745 0.7658682 prediction 0.671349083498624 Functional Gain - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68124618 chr15:68124619 synonymous SNV . 0 22 hPsi_associated_SNPs_25311 0 0 0 0 2 exosome 0.438719736546221 0.438718560896413 0.5317364 0 hPsi_site_19035 iPseU_CNN:0.5317364;iRNA_PseU:0 19036 chr17 7329627 7329627 1 + C A UCEC 7329626 + 7329606 7329646 41 CCCGACCCACGCAGTACTCCTCTTTCTCCTGCCACCATTTC CCCGACCCACGCAGTACTCCTATTTCTCCTGCCACCATTTC < 41bp 0.520916265475322 0.856589632830162 0.3206252 0.7513776 prediction 0.67134673470968 Functional Gain - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329626 chr17:7329627 nonsynonymous SNV 0.088 3 22 hPsi_associated_SNPs_25312 0 0 0 0 0 exosome 0.438718593164632 0.438718592981786 0.5027552 0 hPsi_site_19036 iPseU_CNN:0.5027552;iRNA_PseU:0 19037 chr6 116720652 116720652 1 + C A BRCA 116720651 + 116720631 116720671 41 AGGCTGTGCACACGATGCTGTCCAGCCCCTTGGAATACCTC AGGCTGTGCACACGATGCTGTACAGCCCCTTGGAATACCTC < 41bp 0.524375346896968 0.860048415263276 0.6577679 0.90294 prediction 0.671346136732615 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116720651 chr6:116720652 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_25313 0 0 0 0 0 nucleolus 0.438718592898372 0.438718592893491 0.4903442 0 hPsi_site_19037 iPseU_CNN:0.4903442;iRNA_PseU:0 19038 chrX 13331180 13331180 1 + G A rs773416488 13331179 + 13331159 13331199 41 GAACCTGAGTCCGTGTTGACTGTGGTAGATGCGGGTGTCCA GAACCTGAGTCCGTGTTGACTATGGTAGATGCGGGTGTCCA < 41bp 0.446708787244964 0.835671661487102 0.18853119 0.22236532 prediction 0.671343322974204 Functional Gain - GS1-600G8.3 ENSG00000231216 ncRNA_exonic Human antisense chrX:13331179 chrX:13331180 . . 0 22 hPsi_associated_SNPs_25314 0 0 1 0 2 unknown 0.43917898147591 0.439583047311305 0 0 hPsi_site_19038 iPseU_CNN:0;iRNA_PseU:0 19039 chr6 26413611 26413611 1 + G A rs557429898 26413610 + 26413590 26413630 41 GAAAGAGTGGCATATAGGGGTGTGCAGTAAGAATGTGCAGA GAAAGAGTGGCATATAGGGGTATGCAGTAAGAATGTGCAGA < 41bp 0.543643616976225 0.879307193564348 0.30138153 0.29514644 prediction 0.671327153176247 Functional Gain - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26413610 chr6:26413611 synonymous SNV . 0 22 hPsi_associated_SNPs_25315 0 0 0 0 0 Nucleus 0.438718809862755 0.438718582021855 0 0 hPsi_site_19039 iPseU_CNN:0;iRNA_PseU:0 19040 chr10 8106031 8106031 1 + G A HNSC 8106030 + 8106010 8106050 41 ATGGCACGGGACACTACCTGTGCAACGCCTGCGGGCTCTAT ATGGCACGGGACACTACCTGTACAACGCCTGCGGGCTCTAT < 41bp 0.416115870668806 0.835659515455732 0.5930876 0.9106388 prediction 0.671319030911464 Functional Gain - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8106030 chr10:8106031 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_25316 0 0 1 0 3 Cytosol 0.438916426183985 0.438447518766604 0.6351024 0 hPsi_site_19040 iPseU_CNN:0.6351024;iRNA_PseU:0 19041 chr19 45381553 45381553 1 + G A UCEC 45381552 + 45381532 45381572 41 GGGGGGGACACTGCTGGTGCTGCTGCTTCTGGCTGGGGGGT GGGGGGGACACTGCTGGTGCTACTGCTTCTGGCTGGGGGGT < 41bp 0.543268147541933 0.878927043740938 0.2716167 0.7140093 prediction 0.67131779239801 Functional Gain - NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45381552 chr19:45381553 synonymous SNV . 0 22 hPsi_associated_SNPs_25317 0 0 1 0 1 Ribosome 0.43860095204608 0.430335862298706 0.4280186 0 hPsi_site_19041 iPseU_CNN:0.4280186;iRNA_PseU:0 19042 chr10 127442368 127442368 1 + C A LIHC 127442367 + 127442347 127442387 41 GAGTCTCGGTTGTCATTTCTTCTCCTTCAGTCCATTAAACT GAGTCTCGGTTGTCATTTCTTATCCTTCAGTCCATTAAACT < 41bp 0.514141745716056 0.849789114941085 0.1887235 0.280586 prediction 0.671294738450059 Functional Gain - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127442367 chr10:127442368 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25318 0 0 1 0 1 Cytosol 0.438718489425175 0.438718572899407 0 0 hPsi_site_19042 iPseU_CNN:0;iRNA_PseU:0 19043 chr17 7578203 7578203 1 + C T BRCA 7578204 - 7578184 7578224 41 AGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCC AGAAACACTTTTCGACATAGTATGGTGGTGCCCTATGAGCC < 41bp 0.538048369888355 0.873694532384268 0.30019212 0.55430853 prediction 0.671292324991825 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578204 chr17:7578203 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_25319 13 0 1 0 3 Ribosome 0.438718593143783 0.438718592995586 0.10861706 0 hPsi_site_19043 iPseU_CNN:0.10861706;iRNA_PseU:0 19044 chr22 39911375 39911375 1 + C A UCEC 39911374 + 39911354 39911394 41 ACCCAGACAGGCCCTGCTTTTCTAGGATGTGGCCTTAGAGC ACCCAGACAGGCCCTGCTTTTATAGGATGTGGCCTTAGAGC < 41bp 0.513259914503811 0.848904113293766 0.59612197 0.40649188 prediction 0.671288397579911 Functional Gain - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39911374 chr22:39911375 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25320 0 0 1 0 0 chromatin 0.439703422245363 0.43885387789022 0 0 hPsi_site_19044 iPseU_CNN:0;iRNA_PseU:0 19045 chr21 30505702 30505702 1 + G A UCEC 30505701 + 30505681 30505721 41 AGGGTACCTGCTGACAAGCCTGTACGCATCGCCTTTAGCCT AGGGTACCTGCTGACAAGCCTATACGCATCGCCTTTAGCCT < 41bp 0.554919838251447 0.890562336917025 0.39999858 0.66027796 prediction 0.671284997331155 Functional Gain - MAP3K7CL ENSG00000156265 CDS Human protein_coding chr21:30505701 chr21:30505702 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_25321 0 0 0 1 2 exosome 0.438718514704856 0.438717544849312 0.32055592 0 hPsi_site_19045 iPseU_CNN:0.32055592;iRNA_PseU:0 19046 chr5 115394647 115394647 1 + G A rs76513063 115394646 + 115394626 115394666 41 GTTTAATGTTCCTGACTAGGTGCTCTTGTATATGGACTGAT GTTTAATGTTCCTGACTAGGTACTCTTGTATATGGACTGAT < 41bp 0.478863825845206 0.835636906039356 0.25719887 0.6098161 prediction 0.671273812078713 Functional Gain - ARL14EPL ENSG00000268223 UTR3 Human protein_coding chr5:115394646 chr5:115394647 . . 0 22 hPsi_associated_SNPs_25322 0 0 0 0 0 exosome 0.438310169399899 0.438718015980567 0.2196322 0 hPsi_site_19046 iPseU_CNN:0.2196322;iRNA_PseU:0 19047 chr14 20923850 20923850 1 + G A SKCM 20923849 + 20923829 20923869 41 GCGGTGGCGGAAGACGGGGATGAGCTCAGGACAGGTAAGGG GCGGTGGCGGAAGACGGGGATAAGCTCAGGACAGGTAAGGG < 41bp 0.425823073699317 0.835631810154099 0.2058428 0.58742285 prediction 0.671263620308198 Functional Gain - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20923849 chr14:20923850 nonsynonymous SNV 0.294 0 22 hPsi_associated_SNPs_25323 0 0 1 0 1 Cytosol 0.438718588140394 0.438718592972567 0.1748457 0 hPsi_site_19047 iPseU_CNN:0.1748457;iRNA_PseU:0 19048 chr19 30311662 30311662 1 + C A COAD 30311661 + 30311641 30311681 41 CTTTTACTTGGCACAAGATTTCTTTGACCGGTATATGGCGA CTTTTACTTGGCACAAGATTTATTTGACCGGTATATGGCGA < 41bp 0.519603158057236 0.855228316941729 0.34691194 0.3912689 prediction 0.671250317768986 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30311661 chr19:30311662 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25324 0 0 0 0 2 Ribosome 0.438718592984594 0.438717706137556 0 0 hPsi_site_19048 iPseU_CNN:0;iRNA_PseU:0 19049 chr22 27026306 27026306 1 + G A SKCM 27026305 + 27026285 27026325 41 TGCCTTTTCTCTTTTCCAGCTGGGTTTGCTCCCAGTTTCCG TGCCTTTTCTCTTTTCCAGCTAGGTTTGCTCCCAGTTTCCG < 41bp 0.440289573976304 0.835623989829779 0.18088636 0.26023686 prediction 0.671247979659558 Functional Gain - CRYBA4 ENSG00000196431 CDS Human protein_coding chr22:27026305 chr22:27026306 stopgain 0.898 1 22 hPsi_associated_SNPs_25325 0 0 0 0 1 Cytosol 0.43872498148649 0.438718589334415 0 0 hPsi_site_19049 iPseU_CNN:0;iRNA_PseU:0 19050 chrX 155254985 155254985 1 + G A STAD 155254984 + 155254964 155255004 41 GTCAGACTCCATCCCTCCTGTGCCCCCACCGCAACAGCCAC GTCAGACTCCATCCCTCCTGTACCCCCACCGCAACAGCCAC < 41bp 0.550213612999275 0.885828487950007 0.22508508 0.3921194 prediction 0.671229749901464 Functional Gain - DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155254984 chrX:155254985 . . 0 22 hPsi_associated_SNPs_25326 0 0 1 0 1 unknown 0.43871859299696 0.438718592966839 0 0 hPsi_site_19050 iPseU_CNN:0;iRNA_PseU:0 19051 chr11 108012379 108012379 1 + G A UCEC 108012378 + 108012358 108012398 41 GATGAAGAATATAAACGTGTTGATTTTAGCAAAGTTCCAAA GATGAAGAATATAAACGTGTTAATTTTAGCAAAGTTCCAAA < 41bp 0.43828314811906 0.835613177866743 0.26572317 0.48252362 prediction 0.671226355733486 Functional Gain - ACAT1 ENSG00000075239 CDS Human protein_coding chr11:108012378 chr11:108012379 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25327 0 0 1 0 2 Ribosome 0.441271140737707 0.443767327385798 0 0 hPsi_site_19051 iPseU_CNN:0;iRNA_PseU:0 19052 chr14 20216239 20216239 1 + C A LUAD 20216238 + 20216218 20216258 41 GCTTCTTGGTCTTACTATTCTCTTATGCTATCATCCTGATC GCTTCTTGGTCTTACTATTCTATTATGCTATCATCCTGATC < 41bp 0.500370961892111 0.835979139423588 0.33779436 0.48494634 prediction 0.671216355062954 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216238 chr14:20216239 nonsynonymous SNV 0.870 3 22 hPsi_associated_SNPs_25328 0 0 0 0 0 unknown 0.438718591395021 0.438718529193674 0 0 hPsi_site_19052 iPseU_CNN:0;iRNA_PseU:0 19053 chr1 248570269 248570269 1 + C A LUAD 248570268 + 248570248 248570288 41 CAGCCCAGGACAAAGTCCTCTCTGTGTTTTACACCATTCTC CAGCCCAGGACAAAGTCCTCTATGTGTTTTACACCATTCTC < 41bp 0.50394694161971 0.839554579251852 0.300694 0.39631563 prediction 0.671215275264284 Functional Gain - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248570268 chr1:248570269 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_25329 0 0 0 0 0 unknown 0.438664962572392 0.438718562510451 0 0 hPsi_site_19053 iPseU_CNN:0;iRNA_PseU:0 19054 chr9 136891653 136891653 1 + C A rs76785226 136891652 + 136891632 136891672 41 TGTGCGGTCCCCTGAATGGGTCTCAGGTGTCTTCAGAATGG TGTGCGGTCCCCTGAATGGGTATCAGGTGTCTTCAGAATGG < 41bp 0.500168093318525 0.835770884603414 0.15488559 0.2807446 prediction 0.671205582569777 Functional Gain - LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136891652 chr9:136891653 . . 0 22 hPsi_associated_SNPs_25330 0 0 1 0 0 exosome 0.438718238411713 0.438717403991522 0 0 hPsi_site_19054 iPseU_CNN:0;iRNA_PseU:0 19055 chr11 74952556 74952556 1 + G A rs150733827 74952555 + 74952535 74952575 41 GCAGCTCAACCACGCGCTGGTGCGCGGCGGCCCCGCGCTGC GCAGCTCAACCACGCGCTGGTACGCGGCGGCCCCGCGCTGC < 41bp 0.517000487135698 0.852598210410094 0.42085907 0.9731623 prediction 0.671195446548792 Functional Gain - TPBGL ENSG00000261594 CDS Human protein_coding chr11:74952555 chr11:74952556 synonymous SNV . 0 22 hPsi_associated_SNPs_25331 0 0 0 0 0 exosome 0.43880803943196 0.438723818846444 0.9463246 0 hPsi_site_19055 iPseU_CNN:0.9463246;iRNA_PseU:0 19056 chr7 150554914 150554914 1 + G A UCEC 150554913 + 150554893 150554933 41 GAAGGGCCAGGTGCTGGTGCTGCGGACAACTTCAACTGTCT GAAGGGCCAGGTGCTGGTGCTACGGACAACTTCAACTGTCT < 41bp 0.561609248256704 0.897204164996658 0.2022573 0.29292274 prediction 0.671189833479908 Functional Gain - AOC1 ENSG00000002726 CDS Human protein_coding chr7:150554913 chr7:150554914 synonymous SNV . 0 22 hPsi_associated_SNPs_25332 0 0 0 0 0 exosome 0.438760770243349 0.438718198639296 0 0 hPsi_site_19056 iPseU_CNN:0;iRNA_PseU:0 19057 chr1 26751877 26751877 1 + G A SKCM 26751876 + 26751856 26751896 41 TAAGAAGTCAGCCAAGGGTCTGGAATCCATCCGTGTCACCG TAAGAAGTCAGCCAAGGGTCTAGAATCCATCCGTGTCACCG < 41bp 0.420924675129626 0.83559461738183 0.70346445 0.8937833 prediction 0.67118923476366 Functional Gain - LIN28A ENSG00000131914 CDS Human protein_coding chr1:26751876 chr1:26751877 synonymous SNV . 0 22 hPsi_associated_SNPs_25333 0 0 0 0 0 Nucleus 0.438718689321062 0.438718049149692 0.3806377 0 hPsi_site_19057 iPseU_CNN:0.3806377;iRNA_PseU:0 19058 chr10 99625484 99625484 1 + G A rs567071631 99625483 + 99625463 99625503 41 CGAGAGTCCCTGTAGGGAGGTGTATGGCCGGAGTGAGGGCC CGAGAGTCCCTGTAGGGAGGTATATGGCCGGAGTGAGGGCC < 41bp 0.52681023992566 0.862402243061975 0.5977536 0.7798713 prediction 0.671184006272631 Functional Gain - GOLGA7B ENSG00000155265 UTR3 Human protein_coding chr10:99625483 chr10:99625484 . . 0 22 hPsi_associated_SNPs_25334 0 0 1 0 0 Endoplasmic reticulum 0.438718614879172 0.438718595543215 0.3642354 0 hPsi_site_19058 iPseU_CNN:0.3642354;iRNA_PseU:0 19059 chr11 66297375 66297375 1 + G A BLCA 66297374 + 66297354 66297394 41 GCAGGCCCTCGAGTCCAGCCTGAGCCCCCTGTCCACGACAG GCAGGCCCTCGAGTCCAGCCTAAGCCCCCTGTCCACGACAG < 41bp 0.423089645787388 0.835588796928996 0.23027506 0.3403561 prediction 0.671177593857993 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66297374 chr11:66297375 synonymous SNV . 0 22 hPsi_associated_SNPs_25335 0 0 0 0 2 membrane 0.438736099843533 0.438723603196307 0 0 hPsi_site_19059 iPseU_CNN:0;iRNA_PseU:0 19060 chr4 156830073 156830073 1 + C A UCEC 156830072 + 156830052 156830092 41 GGAACATGCTTAAGGTTGTTTCTCGGATGCACCGAGTGTCA GGAACATGCTTAAGGTTGTTTATCGGATGCACCGAGTGTCA < 41bp 0.516353735178118 0.851935497590987 0.2939875 0.4187373 prediction 0.671163524825739 Functional Gain - TDO2 ENSG00000151790 CDS Human protein_coding chr4:156830072 chr4:156830073 nonsynonymous SNV 0.200 2 22 hPsi_associated_SNPs_25336 0 0 0 0 2 exosome 0.438719518893172 0.438763542364757 0 0 hPsi_site_19060 iPseU_CNN:0;iRNA_PseU:0 19061 chr17 34171750 34171750 1 + C A UCEC 34171749 + 34171729 34171769 41 GGAGGTGGCTATGGAGGAGATCGAGGTGGCTATGGAGGAGA GGAGGTGGCTATGGAGGAGATAGAGGTGGCTATGGAGGAGA < 41bp 0.477055120171494 0.835581649885215 0.16042763 0.27753782 prediction 0.67116329977043 Functional Gain - TAF15 ENSG00000172660 CDS Human other chr17:34171749 chr17:34171750 synonymous SNV . 0 22 hPsi_associated_SNPs_25337 0 0 1 0 0 Cytosol 0.438718592995102 0.438718592901322 0 0 hPsi_site_19061 iPseU_CNN:0;iRNA_PseU:0 19062 chr16 23224441 23224441 1 + C A COAD 23224440 + 23224420 23224460 41 TAGAAGTGGTTGCTGCCTGTTCTCACTTGGGACCAAGGCCG TAGAAGTGGTTGCTGCCTGTTATCACTTGGGACCAAGGCCG < 41bp 0.476601223645345 0.835580486850442 0.5513263 0.73243827 prediction 0.671160973700884 Functional Gain - SCNN1G ENSG00000166828 CDS Human protein_coding chr16:23224440 chr16:23224441 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25338 0 0 0 0 2 exosome 0.438795291483255 0.439906744678015 0.36222394 0 hPsi_site_19062 iPseU_CNN:0.36222394;iRNA_PseU:0 19063 chr20 18576746 18576746 1 + C A CESC 18576745 + 18576725 18576765 41 ACAGTACGAGATTCTGTGTGTCAGCCAGTTTACCCTCCAGT ACAGTACGAGATTCTGTGTGTAAGCCAGTTTACCCTCCAGT < 41bp 0.527272393903984 0.862850677058819 0.30086064 0.81838524 prediction 0.67115656630967 Functional Gain - DTD1 ENSG00000125821 CDS Human protein_coding chr20:18576745 chr20:18576746 synonymous SNV . 0 22 hPsi_associated_SNPs_25339 0 0 1 0 0 Ribosome 0.438623831243043 0.434008852180594 0.63677048 0 hPsi_site_19063 iPseU_CNN:0.63677048;iRNA_PseU:0 19064 chr20 6759592 6759592 1 + C A SARC 6759591 + 6759571 6759611 41 TGCCATTGTTCAGACGTTGGTCAACTCTGTTAACTCTAAGA TGCCATTGTTCAGACGTTGGTAAACTCTGTTAACTCTAAGA < 41bp 0.504284141896378 0.839855754412376 0.3959979 0.4865479 prediction 0.671143225031996 Functional Gain - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6759591 chr20:6759592 synonymous SNV . 0 22 hPsi_associated_SNPs_25340 0 0 0 0 0 Ribosome 0.438713856730458 0.438718507930006 0 0 hPsi_site_19064 iPseU_CNN:0;iRNA_PseU:0 19065 chr5 176794018 176794018 1 + C A GBM 176794017 + 176793997 176794037 41 GAGCCCCGGCCGGACATGTTTCGGGCACAGCAGCTTCAGGT GAGCCCCGGCCGGACATGTTTAGGGCACAGCAGCTTCAGGT < 41bp 0.475633133857273 0.835565479517415 0.7233759 0.76673186 prediction 0.67113095903483 Functional Gain - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176794017 chr5:176794018 synonymous SNV . 0 22 hPsi_associated_SNPs_25341 0 0 0 0 1 nucleolus 0.438703667461307 0.438718551606128 0.0867119200000002 0 hPsi_site_19065 iPseU_CNN:0.0867119200000002;iRNA_PseU:0 19066 chr1 32739964 32739964 1 + G A BLCA 32739963 + 32739943 32739983 41 TGCAGCTCACACCCGGAAGATGACTGGATGGAAAACATCGA TGCAGCTCACACCCGGAAGATAACTGGATGGAAAACATCGA < 41bp 0.429571977072989 0.835561300790446 0.20999214 0.3028668 prediction 0.671122601580892 Functional Gain - LCK ENSG00000182866 CDS Human protein_coding chr1:32739963 chr1:32739964 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25342 0 0 1 0 1 Cytosol 0.438688116418866 0.438720076622714 0 0 hPsi_site_19066 iPseU_CNN:0;iRNA_PseU:0 19067 chr1 159557949 159557949 1 + G A SKCM 159557948 + 159557928 159557968 41 TGTTACTGATCATGTAAACTTGATCACACCGCTGGAGAAGC TGTTACTGATCATGTAAACTTAATCACACCGCTGGAGAAGC < 41bp 0.543180823307348 0.878740027848474 0.22399366 0.5904405 prediction 0.671118409082254 Functional Gain - APCS ENSG00000132703 CDS Human protein_coding chr1:159557948 chr1:159557949 synonymous SNV . 0 22 hPsi_associated_SNPs_25343 0 0 0 0 1 Endoplasmic reticulum 0.431223104621454 0.437646351926981 0.180881 0 hPsi_site_19067 iPseU_CNN:0.180881;iRNA_PseU:0 19068 chr6 18215304 18215304 1 + G A CESC 18215303 + 18215283 18215323 41 GCATCCGTGAGGACCCTGGATGACAAACAGGTGCTGCAGCA GCATCCGTGAGGACCCTGGATAACAAACAGGTGCTGCAGCA < 41bp 0.423405497138524 0.835555211191579 0.24283808 0.5095073 prediction 0.671110422383158 Functional Gain - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18215303 chr6:18215304 nonsynonymous SNV 0.705 5 22 hPsi_associated_SNPs_25344 0 0 1 0 2 Cytosol 0.439011479737998 0.437782213838947 0.0190146 0 hPsi_site_19068 iPseU_CNN:0.0190146;iRNA_PseU:0 19069 chr12 8618181 8618181 1 + G A BLCA 8618180 + 8618160 8618200 41 AAGAGTGAGCAGAACTGTGTTGAGATGGGAGCACATTTGGT AAGAGTGAGCAGAACTGTGTTAAGATGGGAGCACATTTGGT < 41bp 0.437113787986403 0.83555387878224 0.34986973 0.51658595 prediction 0.671107757564479 Functional Gain - CLEC6A ENSG00000205846 CDS Human protein_coding chr12:8618180 chr12:8618181 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_25345 0 0 0 0 1 exosome 0.438726312860933 0.438565512745354 0.0331718999999999 0 hPsi_site_19069 iPseU_CNN:0.0331718999999999;iRNA_PseU:0 19070 chr3 50222050 50222050 1 + C A COAD 50222049 + 50222029 50222069 41 CTGGTGGAACCTTCACGCCATCTATGAAGTCCACCAAGGAT CTGGTGGAACCTTCACGCCATATATGAAGTCCACCAAGGAT < 41bp 0.471313832447265 0.835550441441961 0.256976 0.4601881 prediction 0.671100882883922 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50222049 chr3:50222050 nonsynonymous SNV 0.055 3 22 hPsi_associated_SNPs_25346 0 0 0 0 1 Endoplasmic reticulum 0.438719636663672 0.438718503627422 0 0 hPsi_site_19070 iPseU_CNN:0;iRNA_PseU:0 19071 chr3 32995250 32995250 1 + G A SKCM 32995249 + 32995229 32995269 41 TGGGCTAGGTCTGTGCAAGATGATTTCCTGGATGTACTTGG TGGGCTAGGTCTGTGCAAGATAATTTCCTGGATGTACTTGG < 41bp 0.55288073981153 0.888429449809138 0.20004079 0.29394913 prediction 0.671097419995217 Functional Gain - CCR4 ENSG00000183813 CDS Human protein_coding chr3:32995249 chr3:32995250 nonsynonymous SNV 0.559 0 22 hPsi_associated_SNPs_25347 0 0 0 0 0 exosome 0.438717580713851 0.438718576797972 0 0 hPsi_site_19071 iPseU_CNN:0;iRNA_PseU:0 19072 chr1 147092425 147092425 1 + C A UCEC 147092424 + 147092404 147092444 41 AGTCATATGCCACCACTACCTCTCAACCCTTCCAGTAACCC AGTCATATGCCACCACTACCTATCAACCCTTCCAGTAACCC < 41bp 0.517686840078542 0.853235195452698 0.17286173 0.21222651 prediction 0.671096710748312 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147092424 chr1:147092425 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25348 0 0 1 0 0 Nucleus 0.438718564315652 0.43871859293808 0 0 hPsi_site_19072 iPseU_CNN:0;iRNA_PseU:0 19073 chr7 100730824 100730824 1 + C A UCEC 100730823 + 100730803 100730843 41 GGCCTCCTTCAAGACCAACTTCTTCGTCAATGGGCTGCTGG GGCCTCCTTCAAGACCAACTTATTCGTCAATGGGCTGCTGG < 41bp 0.489275890968944 0.83554519638193 0.3271997 0.36493057 prediction 0.671090392763861 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730823 chr7:100730824 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_25349 0 0 1 0 0 nucleus 0.438759711519446 0.438729108898592 0 0 hPsi_site_19073 iPseU_CNN:0;iRNA_PseU:0 19074 chr17 48674212 48674212 1 + G A BRCA 48674211 + 48674191 48674231 41 CACGGGCCTGGGCGAGGCGCTGGGCCCTGCGTCGCGCCGCA CACGGGCCTGGGCGAGGCGCTAGGCCCTGCGTCGCGCCGCA < 41bp 0.515060637706671 0.850605569803248 0.18317547 0.35847974 prediction 0.671089864193155 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48674211 chr17:48674212 synonymous SNV . 0 22 hPsi_associated_SNPs_25350 0 0 0 0 1 exosome 0.438760607536097 0.438721661835295 0 0 hPsi_site_19074 iPseU_CNN:0;iRNA_PseU:0 19075 chr20 61303516 61303516 1 + G A rs114725229 61303515 + 61303495 61303535 41 TTATACCCGATCGTGTGTGGTGTGCGTGAGGACAAACTCCG TTATACCCGATCGTGTGTGGTATGCGTGAGGACAAACTCCG < 41bp 0.516791832401216 0.852332847413109 0.25582868 0.4071853 prediction 0.671082030023787 Functional Gain - SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303515 chr20:61303516 . . 0 22 hPsi_associated_SNPs_25351 0 0 1 0 0 Endoplasmic reticulum 0.438682711444217 0.43846945824736 0 0 hPsi_site_19075 iPseU_CNN:0;iRNA_PseU:0 19076 chr15 76452489 76452489 1 + C A UCEC 76452488 + 76452468 76452508 41 CACTGGATCAGCCTGGTCATTCTGTCCGTGTTCTTCTCAGA CACTGGATCAGCCTGGTCATTATGTCCGTGTTCTTCTCAGA < 41bp 0.531148994474733 0.866682168786639 0.38394675 0.46126002 prediction 0.671066348623812 Functional Gain - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76452488 chr15:76452489 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_25352 0 0 0 0 2 Nucleus 0.438908047736213 0.438609272263011 0 0 hPsi_site_19076 iPseU_CNN:0;iRNA_PseU:0 19077 chrX 38271200 38271200 1 + C A UCEC 38271199 + 38271179 38271219 41 TGGATGATGAAGTCTTTTATTCTCCTCGATCACTAGTGTTC TGGATGATGAAGTCTTTTATTATCCTCGATCACTAGTGTTC < 41bp 0.511827026145387 0.847352226545934 0.55132973 0.5257662 prediction 0.671050400801095 Functional Gain - OTC ENSG00000036473 CDS Human protein_coding chrX:38271199 chrX:38271200 nonsynonymous SNV 0.929 5 22 hPsi_associated_SNPs_25353 0 0 0 0 2 exosome 0.437084808822935 0.438722259366578 0 0 hPsi_site_19077 iPseU_CNN:0;iRNA_PseU:0 19078 chr19 35832682 35832682 1 + G A BLCA 35832681 + 35832661 35832701 41 AAGAGTGCAACCCTGACCTGTGAGAGCGACGCCAACCCTCC AAGAGTGCAACCCTGACCTGTAAGAGCGACGCCAACCCTCC < 41bp 0.406538133531051 0.835522936427574 0.3741014 0.6815212 prediction 0.671045872855148 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35832681 chr19:35832682 nonsynonymous SNV 0.305 2 22 hPsi_associated_SNPs_25354 0 0 0 0 1 Endoplasmic reticulum 0.438718356223613 0.438718592995104 0.3630424 0 hPsi_site_19078 iPseU_CNN:0.3630424;iRNA_PseU:0 Multiple complex diseases 19079 chr3 50685446 50685446 1 + C A CESC 50685445 + 50685425 50685465 41 GAAAAAAGCAGGCAGGCAGCTCCTCTGCCTCACAGGGCTGC GAAAAAAGCAGGCAGGCAGCTACTCTGCCTCACAGGGCTGC < 41bp 0.514480254638066 0.849991424437923 0.25244945 0.77282363 prediction 0.671022339599713 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50685445 chr3:50685446 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25355 0 0 1 0 0 Ribosome 0.438718796377891 0.438719129322268 0.54564726 0 hPsi_site_19079 iPseU_CNN:0.54564726;iRNA_PseU:0 19080 chr17 74560487 74560487 1 + G A rs12944474 74560486 + 74560466 74560506 41 CAAAGTGCTAGGATTACAGGTGTGAGCCACCACACCCAGCT CAAAGTGCTAGGATTACAGGTATGAGCCACCACACCCAGCT < 41bp 0.542526045240837 0.878027635780774 0.2691341 0.3324639 prediction 0.671003181079874 Functional Gain - SNHG16 ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74560486 chr17:74560487 . . 0 22 hPsi_associated_SNPs_25356 0 0 0 0 0 unknown 0.438720472468504 0.438718601401212 0 0 hPsi_site_19080 iPseU_CNN:0;iRNA_PseU:0 19081 chr19 41096328 41096328 1 + G A LGG 41096327 + 41096307 41096347 41 GACGGCCTCGGCCAGGCCCCTGGTACTCCCTGCCCCACCCC GACGGCCTCGGCCAGGCCCCTAGTACTCCCTGCCCCACCCC < 41bp 0.430678412633566 0.835501318733512 0.15710524 0.28632426 prediction 0.671002637467025 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41096327 chr19:41096328 nonsynonymous SNV 0.878 0 22 hPsi_associated_SNPs_25357 0 0 1 0 0 Ribosome 0.438718592995086 0.438719011760732 0 0 hPsi_site_19081 iPseU_CNN:0;iRNA_PseU:0 19082 chr12 55615394 55615394 1 + G A SKCM 55615393 + 55615373 55615413 41 ACAGTGGATACAACCATGTATGAAATGCAAGCACTTGCCTC ACAGTGGATACAACCATGTATAAAATGCAAGCACTTGCCTC < 41bp 0.459576805272207 0.835486591401427 0.58194625 0.77727115 prediction 0.670973182802853 Functional Gain - OR10A7 ENSG00000179919 CDS Human protein_coding chr12:55615393 chr12:55615394 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_25358 0 0 0 0 0 unknown 0.437898683892243 0.439209900946612 0.3906498 0 hPsi_site_19082 iPseU_CNN:0.3906498;iRNA_PseU:0 19083 chr19 15839459 15839459 1 + G A rs11669315 15839458 + 15839438 15839478 41 TGTGGCCCTGGGCGTGGGCTTGGTATGTATCATGGCACTGC TGTGGCCCTGGGCGTGGGCTTAGTATGTATCATGGCACTGC < 41bp 0.541620661082588 0.877106633956513 0.28046152 0.68788844 prediction 0.67097194574785 Functional Gain - OR10H2 ENSG00000171942 CDS Human protein_coding chr19:15839458 chr19:15839459 synonymous SNV . 0 22 hPsi_associated_SNPs_25359 0 0 0 0 0 unknown 0.438718593941822 0.438728889566475 0.37577688 0 hPsi_site_19083 iPseU_CNN:0.37577688;iRNA_PseU:0 19084 chr15 73030077 73030077 1 + C A rs578051922 73030076 + 73030056 73030096 41 GCCAGCAGTTGAGCCTAAGGTCCTTCTACCTACCTGGTATT GCCAGCAGTTGAGCCTAAGGTACTTCTACCTACCTGGTATT < 41bp 0.499524614497589 0.835485144329245 0.24345791 0.63723993 prediction 0.670970288658491 Functional Gain - BBS4 ENSG00000140463 UTR3 Human protein_coding chr15:73030076 chr15:73030077 . . 0 22 hPsi_associated_SNPs_25360 1 0 1 0 0 Ribosome 0.438718592860714 0.43871861810748 0.27447986 0 hPsi_site_19084 iPseU_CNN:0.27447986;iRNA_PseU:0 19085 chr7 102087055 102087055 1 + G A UCEC 102087054 + 102087034 102087074 41 CACCACGGTGCTGGTGGCCGTGCACCTGTTCGCCCTCCTCA CACCACGGTGCTGGTGGCCGTACACCTGTTCGCCCTCCTCA < 41bp 0.556721193448394 0.892206067137631 0.43921477 0.73245525 prediction 0.670969747378475 Functional Gain - ORAI2 ENSG00000160991 CDS Human protein_coding chr7:102087054 chr7:102087055 synonymous SNV . 0 22 hPsi_associated_SNPs_25361 0 0 1 0 1 Nucleus 0.438464071574121 0.429755234222765 0.4649105 0 hPsi_site_19085 iPseU_CNN:0.4649105;iRNA_PseU:0 19086 chr2 219127633 219127633 1 + G A CESC 219127632 + 219127612 219127652 41 GAGCCTACTGCTGGCTGGGCTGCTCACGGGTCTGGCATTGC GAGCCTACTGCTGGCTGGGCTACTCACGGGTCTGGCATTGC < 41bp 0.561722250532799 0.897190203612939 0.2777448 0.70308846 prediction 0.670935906160281 Functional Gain - GPBAR1 ENSG00000179921 CDS Human protein_coding chr2:219127632 chr2:219127633 synonymous SNV . 0 22 hPsi_associated_SNPs_25362 0 0 0 0 0 exosome 0.438713977221184 0.438718515970881 0.40617692 0 hPsi_site_19086 iPseU_CNN:0.40617692;iRNA_PseU:0 19087 chr10 35897513 35897513 1 + G A rs183406069 35897512 + 35897492 35897532 41 GACCCGCCTGCCAGCTCCAGTGGTGCTCCCCACCTGAGAGC GACCCGCCTGCCAGCTCCAGTAGTGCTCCCCACCTGAGAGC < 41bp 0.551053788176734 0.886518820928229 0.19182241 0.260112 prediction 0.67093006550299 Functional Gain - GJD4 ENSG00000177291 CDS Human protein_coding chr10:35897512 chr10:35897513 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25363 0 0 0 0 0 exosome 0.438742856585392 0.438798847948591 0 0 hPsi_site_19087 iPseU_CNN:0;iRNA_PseU:0 19088 chr19 52208363 52208363 1 + G A UCEC 52208362 + 52208342 52208382 41 GGATGTTCTTTCGATGGTACTGCAGTGGCAACTAACAAAGG GGATGTTCTTTCGATGGTACTACAGTGGCAACTAACAAAGG < 41bp 0.453501669185644 0.835459002242854 0.26130044 0.7993012 prediction 0.670918004485708 Functional Gain - SPACA6 ENSG00000182310 ncRNA_exonic Human protein_coding chr19:52208362 chr19:52208363 . . 0 22 hPsi_associated_SNPs_25364 0 0 1 0 1 chromatin 0.439781569918323 0.438758721011585 0.5986024 0 hPsi_site_19088 iPseU_CNN:0.5986024;iRNA_PseU:0 19089 chr9 125377637 125377637 1 + C A UCEC 125377636 + 125377616 125377656 41 CACAGAAGGTGCTGTTGTAATCAGTGGAGCTCTGGCCTTCA CACAGAAGGTGCTGTTGTAATAAGTGGAGCTCTGGCCTTCA < 41bp 0.49708017737171 0.835456528951034 0.27051044 0.5218181 prediction 0.670913057902068 Functional Gain - OR1Q1 ENSG00000165202 CDS Human protein_coding chr9:125377636 chr9:125377637 synonymous SNV . 0 22 hPsi_associated_SNPs_25365 0 0 0 0 0 unknown 0.438717606348973 0.438719472647199 0.0436361999999999 0 hPsi_site_19089 iPseU_CNN:0.0436361999999999;iRNA_PseU:0 19090 chrX 14627241 14627241 1 + G A PRAD 14627240 + 14627220 14627260 41 TCCTTTTGGATAAATATGGATGCAGCCCCTGCCAGGGTCGC TCCTTTTGGATAAATATGGATACAGCCCCTGCCAGGGTCGC < 41bp 0.431923686076936 0.835453592093973 0.54580045 0.85722655 prediction 0.670907184187945 Functional Gain - GLRA2 ENSG00000101958 CDS Human protein_coding chrX:14627240 chrX:14627241 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_25366 0 0 0 0 1 nucleus 0.438718592995102 0.438718592995102 0.6228522 0 hPsi_site_19090 iPseU_CNN:0.6228522;iRNA_PseU:0 19091 chr4 134084140 134084140 1 + C A GBM 134084139 + 134084119 134084159 41 TTTCTGCTTACAGGTATGGATCTCTTCTCCAATTGCACTGA TTTCTGCTTACAGGTATGGATATCTTCTCCAATTGCACTGA < 41bp 0.502883834503017 0.83833599283869 0.59545445 0.6734977 prediction 0.670904316671346 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134084139 chr4:134084140 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25367 0 0 0 0 1 cytosol 0.438831318111837 0.43870718747714 0.1560865 0 hPsi_site_19091 iPseU_CNN:0.1560865;iRNA_PseU:0 19092 chr1 117644099 117644099 1 + G A GBM 117644098 + 117644078 117644118 41 CTATCAGGGTCTGGAGAATCTGTCACCAAGCTCACCTTGGC CTATCAGGGTCTGGAGAATCTATCACCAAGCTCACCTTGGC < 41bp 0.549628836155078 0.885066025432739 0.3255172 0.5708799 prediction 0.670874378555323 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117644098 chr1:117644099 nonsynonymous SNV 0.933 0 22 hPsi_associated_SNPs_25368 0 0 1 0 1 Nucleus 0.438699615640718 0.438697991631259 0.1417598 0 hPsi_site_19092 iPseU_CNN:0.1417598;iRNA_PseU:0 19093 chr5 74639721 74639721 1 + G A UCEC 74639720 + 74639700 74639740 41 TAATTCTGACAATAACACGATGCATAGCCATCCTGTATATT TAATTCTGACAATAACACGATACATAGCCATCCTGTATATT < 41bp 0.432230546281124 0.83542820810899 0.24309996 0.55920607 prediction 0.670856416217981 Functional Gain - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74639720 chr5:74639721 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25369 0 0 1 0 2 Nucleus 0.438719200807722 0.438742071874451 0.11841214 0 hPsi_site_19093 iPseU_CNN:0.11841214;iRNA_PseU:0 19094 chr1 152659645 152659645 1 + G A rs201525350 152659644 + 152659624 152659664 41 GCTGCCACAGCTCTGGGGGCTGCTGCTGACCTGGGCTAAGA GCTGCCACAGCTCTGGGGGCTACTGCTGACCTGGGCTAAGA < 41bp 0.450232942731639 0.835428008630347 0.23395169 0.38811767 prediction 0.670856017260693 Functional Gain - LCE2B ENSG00000159455 CDS Human protein_coding chr1:152659644 chr1:152659645 nonsynonymous SNV 0.437 3 22 hPsi_associated_SNPs_25370 0 0 0 0 0 unknown 0.438718592994475 0.438718592544603 0 0 hPsi_site_19094 iPseU_CNN:0;iRNA_PseU:0 19095 chr20 3026885 3026885 1 + G A OV 3026884 + 3026864 3026904 41 TGCGGAGTTCTTCGTGCTGATGGAGCGTTACCAGCACTACC TGCGGAGTTCTTCGTGCTGATAGAGCGTTACCAGCACTACC < 41bp 0.433469346900348 0.835426676128084 0.21588802 0.48791963 prediction 0.670853352256167 Functional Gain - MRPS26 ENSG00000125901 CDS Human protein_coding chr20:3026884 chr20:3026885 nonsynonymous SNV 0.740 0 22 hPsi_associated_SNPs_25371 0 0 1 0 1 Ribosome 0.439044325233595 0.438716095753734 0 0 hPsi_site_19095 iPseU_CNN:0;iRNA_PseU:0 Height 19096 chr14 55529601 55529601 1 + G A UCEC 55529600 + 55529580 55529620 41 TTCCTCCTTCCGGACCATCATGTCCCCCACCTGGTGGTCCT TTCCTCCTTCCGGACCATCATATCCCCCACCTGGTGGTCCT < 41bp 0.433022281552015 0.835425999991213 0.21433109 0.27305365 prediction 0.670851999982426 Functional Gain - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529600 chr14:55529601 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_25372 0 0 1 0 0 Ribosome 0.438718592995105 0.438718592995456 0 0 hPsi_site_19096 iPseU_CNN:0;iRNA_PseU:0 19097 chr12 56494889 56494889 1 + C A UCEC 56494888 + 56494868 56494908 41 TGAACGGTGCCCCCGTCCAGTCTCTCTACACCCAATGCCAC TGAACGGTGCCCCCGTCCAGTATCTCTACACCCAATGCCAC < 41bp 0.530727524966352 0.866150388246755 0.32323116 0.84383744 prediction 0.670845726560806 Functional Gain - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56494888 chr12:56494889 synonymous SNV . 0 22 hPsi_associated_SNPs_25373 0 0 1 0 1 Cytosol 0.438708578950702 0.43871846589017 0.68767488 0 hPsi_site_19097 iPseU_CNN:0.68767488;iRNA_PseU:0 19098 chr5 43280678 43280678 1 + C A UCEC 43280677 + 43280657 43280697 41 TCGCAGCTCAATCACAGGGGTCTATAGAATTATTTTACATA TCGCAGCTCAATCACAGGGGTATATAGAATTATTTTACATA < 41bp 0.488225829853146 0.83541605982568 0.2591552 0.43474245 prediction 0.67083211965136 Functional Gain - NIM1K ENSG00000177453 CDS Human protein_coding chr5:43280677 chr5:43280678 synonymous SNV . 0 22 hPsi_associated_SNPs_25374 0 0 0 0 0 exosome 0.442092753703209 0.438719299281566 0 0 hPsi_site_19098 iPseU_CNN:0;iRNA_PseU:0 19099 chr10 121411190 121411190 1 + G A BLCA 121411189 + 121411169 121411209 41 GGGCAGACCCCAACCCAGCATGAGCGCCGCCACCCACTCGC GGGCAGACCCCAACCCAGCATAAGCGCCGCCACCCACTCGC < 41bp 0.552570354606302 0.887984306378215 0.37688068 0.5832834 prediction 0.670827903543825 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121411189 chr10:121411190 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_25375 0 0 1 0 0 Nucleus 0.438723770665286 0.438718481741571 0.1665668 0 hPsi_site_19099 iPseU_CNN:0.1665668;iRNA_PseU:0 19100 chr5 40981635 40981635 1 + C A LUSC 40981634 + 40981614 40981654 41 GATGCAGAGGGCAGAGCATCTCTGTCACCAGCATAAGGCCT GATGCAGAGGGCAGAGCATCTATGTCACCAGCATAAGGCCT < 41bp 0.489982058648854 0.835410356453144 0.22554144 0.33273166 prediction 0.670820712906289 Functional Gain - C7 ENSG00000112936 CDS Human protein_coding chr5:40981634 chr5:40981635 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_25376 0 0 0 0 0 Endoplasmic reticulum 0.438704835810585 0.438716407416909 0 0 hPsi_site_19100 iPseU_CNN:0;iRNA_PseU:0 19101 chr1 162470765 162470765 1 + G A rs571945327 162470764 + 162470744 162470784 41 AGCAGAATTGCAAAATTGCTTGGCCCAGGCTGGCCTGCAGA AGCAGAATTGCAAAATTGCTTAGCCCAGGCTGGCCTGCAGA < 41bp 0.438152079900622 0.835409560443086 0.30868655 0.79310775 prediction 0.670819120886172 Functional Gain - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162470764 chr1:162470765 synonymous SNV . 0 22 hPsi_associated_SNPs_25377 0 0 1 0 1 chromatin 0.438712094585565 0.438718586139812 0.5862155 0 hPsi_site_19101 iPseU_CNN:0.5862155;iRNA_PseU:0 Height 19102 chr12 49373260 49373260 1 + G A SKCM 49373259 + 49373239 49373279 41 ACGTCCCACCAGGGGTATTGTGAACGTAGCCTCCTCCACGA ACGTCCCACCAGGGGTATTGTAAACGTAGCCTCCTCCACGA < 41bp 0.432103039558115 0.835404844599098 0.18335241 0.28769344 prediction 0.670809689198196 Functional Gain - WNT1 ENSG00000125084 CDS Human protein_coding chr12:49373259 chr12:49373260 synonymous SNV . 0 22 hPsi_associated_SNPs_25378 0 0 0 0 1 exosome 0.438828170173604 0.43881734562297 0 0 hPsi_site_19102 iPseU_CNN:0;iRNA_PseU:0 19103 chr3 179291159 179291159 1 + G A BLCA 179291158 + 179291138 179291178 41 TACTAATCTTATATTCTAGTTGAAGACTGGGATAGTTTCCA TACTAATCTTATATTCTAGTTAAAGACTGGGATAGTTTCCA < 41bp 0.44475850974125 0.835384236062349 0.25994706 0.6553878 prediction 0.670768472124697 Functional Gain - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179291158 chr3:179291159 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_25379 0 0 1 0 2 Ribosome 0.438714937915449 0.438718621006495 0.3107756 0 hPsi_site_19103 iPseU_CNN:0.3107756;iRNA_PseU:0 19104 chr12 109690889 109690889 1 + G A COAD 109690888 + 109690868 109690908 41 CAGATCATGCATTACAATGGTGTCTCCCACATCACCGTGCC CAGATCATGCATTACAATGGTATCTCCCACATCACCGTGCC < 41bp 0.558687105977787 0.894070688062657 0.330655 0.6741843 prediction 0.670767164169739 Functional Gain - ACACB ENSG00000076555 CDS Human protein_coding chr12:109690888 chr12:109690889 nonsynonymous SNV 0.727 1 22 hPsi_associated_SNPs_25380 0 0 0 1 2 Nucleus 0.438510002600014 0.438721899233458 0.3483686 0 hPsi_site_19104 iPseU_CNN:0.3483686;iRNA_PseU:0 19105 chr12 69979525 69979525 1 + G A rs140997100 69979524 + 69979504 69979544 41 GCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTC GCAAAGCCAGCGTCTCCTTGTACCTAGGTCTTTGCATAGTC < 41bp 0.45620332629596 0.835378036161428 0.3467486 0.60024846 prediction 0.670756072322856 Functional Gain - CCT2 ENSG00000166226 UTR5 Human protein_coding chr12:69979524 chr12:69979525 . . 0 22 hPsi_associated_SNPs_25381 0 0 1 0 0 Nucleus 0.438719296263831 0.4387184990991 0.20049692 0 hPsi_site_19105 iPseU_CNN:0.20049692;iRNA_PseU:0 19106 chr20 2841893 2841893 1 + G A LUAD 2841892 + 2841872 2841912 41 AGAAGCTATGTGAGTTCAACTGCAACATCCGGGCACCTCCA AGAAGCTATGTGAGTTCAACTACAACATCCGGGCACCTCCA < 41bp 0.563813952623346 0.899189088351923 0.2837006 0.5951562 prediction 0.670750271457154 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2841892 chr20:2841893 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25382 0 0 1 1 2 chromatin 0.437682613111591 0.438262807902387 0.1903124 0 hPsi_site_19106 iPseU_CNN:0.1903124;iRNA_PseU:0 19107 chrX 68748988 68748988 1 + C A LUAD 68748987 + 68748967 68749007 41 GGAAATGGTGTACGGAGGGCTCCCTGGCTTTATCTGTACAG GGAAATGGTGTACGGAGGGCTACCTGGCTTTATCTGTACAG < 41bp 0.483020181159283 0.835369385557081 0.1601404 0.60796845 prediction 0.670738771114162 Functional Gain - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68748987 chrX:68748988 synonymous SNV . 0 22 hPsi_associated_SNPs_25383 0 0 1 0 1 exosome 0.438719041985334 0.438717886081902 0.2159369 0 hPsi_site_19107 iPseU_CNN:0.2159369;iRNA_PseU:0 19108 chr22 18562668 18562668 1 + G A UCEC 18562667 + 18562647 18562687 41 GAGGTGAAGTGCTCCCTGTGTGTTGTGGGGATCCAGGCCCT GAGGTGAAGTGCTCCCTGTGTATTGTGGGGATCCAGGCCCT < 41bp 0.41475620632815 0.835360052958128 0.28590214 0.6089542 prediction 0.670720105916256 Functional Gain - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18562667 chr22:18562668 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25384 0 0 1 0 1 Ribosome 0.438698569014511 0.438795076549152 0.2179084 0 hPsi_site_19108 iPseU_CNN:0.2179084;iRNA_PseU:0 19109 chr13 26911752 26911752 1 + C A UCEC 26911751 + 26911731 26911771 41 ACAAATAGAAGGAACTGGGATCTCTATGTCGGCATGTAGAG ACAAATAGAAGGAACTGGGATATCTATGTCGGCATGTAGAG < 41bp 0.51263536393094 0.847991106347229 0.3049498 0.40408292 prediction 0.670711484832579 Functional Gain - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26911751 chr13:26911752 synonymous SNV . 0 22 hPsi_associated_SNPs_25385 0 0 1 0 2 Cytosol 0.43873445947457 0.438638348831728 0 0 hPsi_site_19109 iPseU_CNN:0;iRNA_PseU:0 19110 chr10 99079918 99079918 1 + C A BLCA 99079917 + 99079897 99079937 41 AAAGCTTCCCCAACGCCCGCTCCTGGGACCTCTGTCGGCCC AAAGCTTCCCCAACGCCCGCTACTGGGACCTCTGTCGGCCC < 41bp 0.519790354482242 0.855143488993633 0.2882172 0.8090147 prediction 0.670706269022783 Functional Gain - FRAT1 ENSG00000165879 CDS Human protein_coding chr10:99079917 chr10:99079918 synonymous SNV . 0 22 hPsi_associated_SNPs_25386 0 0 0 0 0 Ribosome 0.438717404541313 0.438714830357166 0.6180294 0 hPsi_site_19110 iPseU_CNN:0.6180294;iRNA_PseU:0 19111 chr4 113184195 113184195 1 + G A PRAD 113184194 + 113184174 113184214 41 GAAGAAGAAGCTTTATACGCTGCACAGCGTGAAGCAGCCAG GAAGAAGAAGCTTTATACGCTACACAGCGTGAAGCAGCCAG < 41bp 0.553717909364709 0.889056581331362 0.31871113 0.65757614 prediction 0.670677343933305 Functional Gain - AP1AR ENSG00000138660 CDS Human protein_coding chr4:113184194 chr4:113184195 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25387 0 0 1 0 2 Ribosome 0.438788963833521 0.438878978819878 0.31515228 0 hPsi_site_19111 iPseU_CNN:0.31515228;iRNA_PseU:0 19112 chr15 41146610 41146610 1 + G A CESC 41146609 + 41146589 41146629 41 GTCCAGTGTGCTCTGGCACCTGTCAGCCCACCCAGTTCCGC GTCCAGTGTGCTCTGGCACCTATCAGCCCACCCAGTTCCGC < 41bp 0.564873804367036 0.900211696616477 0.2894977 0.5173997 prediction 0.670675784498883 Functional Gain - SPINT1 ENSG00000166145 CDS Human protein_coding chr15:41146609 chr15:41146610 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_25388 0 0 0 0 0 Ribosome 0.438735367266715 0.438723074737288 0.0347994 0 hPsi_site_19112 iPseU_CNN:0.0347994;iRNA_PseU:0 19113 chr1 171301881 171301881 1 + C A UCEC 171301880 + 171301860 171301900 41 ACTAGAACTGGTACCTGGGTTCTTGGGCGCTCTTCAGATTG ACTAGAACTGGTACCTGGGTTATTGGGCGCTCTTCAGATTG < 41bp 0.515910616423255 0.851246267950949 0.48729342 0.66220844 prediction 0.670671303055388 Functional Gain - FMO4 ENSG00000076258 CDS Human protein_coding chr1:171301880 chr1:171301881 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25389 0 0 0 0 1 cytosol 0.438717582678054 0.438690466690037 0.32441688 0 hPsi_site_19113 iPseU_CNN:0.32441688;iRNA_PseU:0 19114 chr9 32424621 32424621 1 + G A UCEC 32424620 + 32424600 32424640 41 GCCTCAGGACAAAGTTGCTGTGTCCGACATGAAAAAGGACT GCCTCAGGACAAAGTTGCTGTATCCGACATGAAAAAGGACT < 41bp 0.424839810157628 0.835335449600283 0.27080077 0.4091528 prediction 0.670670899200565 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32424620 chr9:32424621 synonymous SNV . 0 22 hPsi_associated_SNPs_25390 0 0 1 0 2 Ribosome 0.438717517416027 0.438718158253033 0 0 hPsi_site_19114 iPseU_CNN:0;iRNA_PseU:0 19115 chr1 159778098 159778098 1 + C A COAD 159778097 + 159778077 159778117 41 AGATGGAAAATTCCTTCATTTCTCTAAGGAAAACCAGACTC AGATGGAAAATTCCTTCATTTATCTAAGGAAAACCAGACTC < 41bp 0.476027753552861 0.835332051721195 0.21362907 0.29511207 prediction 0.67066410344239 Functional Gain - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159778097 chr1:159778098 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25391 0 0 0 0 0 exosome 0.438718592994741 0.438718356113904 0 0 hPsi_site_19115 iPseU_CNN:0;iRNA_PseU:0 19116 chr16 57765164 57765164 1 + C A PAAD 57765163 + 57765143 57765183 41 GGGGGAGCTCCAGAAAATATTCGCTTGATGTCCCTCCTGGG GGGGGAGCTCCAGAAAATATTAGCTTGATGTCCCTCCTGGG < 41bp 0.478968087523372 0.835329008555533 0.3537708 0.38147044 prediction 0.670658017111067 Functional Gain - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57765163 chr16:57765164 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25392 0 0 0 0 1 cytosol 0.438718847989682 0.438718593232376 0 0 hPsi_site_19116 iPseU_CNN:0;iRNA_PseU:0 19117 chr11 63517611 63517611 1 + C A CESC 63517610 + 63517590 63517630 41 TCTCTCTGTCACCATCAGCTTCAGGATCTACAAGTCCGTCA TCTCTCTGTCACCATCAGCTTAAGGATCTACAAGTCCGTCA < 41bp 0.512486479282405 0.847807811908659 0.21834743 0.29007944 prediction 0.670642665252509 Functional Gain - RTN3 ENSG00000133318 CDS Human protein_coding chr11:63517610 chr11:63517611 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25393 0 0 1 0 1 Endoplasmic reticulum 0.438717522949515 0.438700135243064 0 0 hPsi_site_19117 iPseU_CNN:0;iRNA_PseU:0 19118 chr19 10823475 10823475 1 + G A CESC 10823474 + 10823454 10823494 41 GCCCACTGGGAACCTGCAGTTGAGGAAGAAGGTGTTTGAGA GCCCACTGGGAACCTGCAGTTAAGGAAGAAGGTGTTTGAGA < 41bp 0.56726843000485 0.902588659666602 0.27027526 0.3326978 prediction 0.670640459323505 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823474 chr19:10823475 synonymous SNV . 0 22 hPsi_associated_SNPs_25394 0 0 1 0 2 Ribosome 0.438718592995903 0.438718592995102 0 0 hPsi_site_19118 iPseU_CNN:0;iRNA_PseU:0 19119 chr17 79674211 79674211 1 + G A HNSC 79674210 + 79674190 79674230 41 AAAGCCAATGTCGCCAAAGCTGAGGCGGAGAAGATCAAGGC AAAGCCAATGTCGCCAAAGCTAAGGCGGAGAAGATCAAGGC < 41bp 0.430153639506692 0.835318506078548 0.28763968 0.32544416 prediction 0.670637012157096 Functional Gain - MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79674210 chr17:79674211 nonsynonymous SNV 0.723 3 22 hPsi_associated_SNPs_25395 0 0 1 0 2 Ribosome 0.43869750882893 0.438718581499884 0 0 hPsi_site_19119 iPseU_CNN:0;iRNA_PseU:0 19120 chr19 44223631 44223631 1 + G A READ 44223630 + 44223610 44223650 41 CTACCACCGCAGCTTTGGTCTGGACGACGACTCGCTGGCCA CTACCACCGCAGCTTTGGTCTAGACGACGACTCGCTGGCCA < 41bp 0.560255844249239 0.895572764410661 0.3751712 0.7539884 prediction 0.670633840322844 Functional Gain - IRGC ENSG00000124449 CDS Human protein_coding chr19:44223630 chr19:44223631 synonymous SNV . 0 22 hPsi_associated_SNPs_25396 0 0 0 0 0 unknown 0.438718605671001 0.439247481761972 0.5079768 0 hPsi_site_19120 iPseU_CNN:0.5079768;iRNA_PseU:0 19121 chr18 21110457 21110457 1 + C A GBM 21110456 + 21110436 21110476 41 TTGGTGGCCATGACAACATTTCTGCACGAAAATTTTTAGAT TTGGTGGCCATGACAACATTTATGCACGAAAATTTTTAGAT < 41bp 0.480467992835363 0.835316104534822 0.27682096 0.33763367 prediction 0.670632209069643 Functional Gain - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21110456 chr18:21110457 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25397 0 0 0 0 0 Ribosome 0.439016865560275 0.438771323426789 0 0 hPsi_site_19121 iPseU_CNN:0;iRNA_PseU:0 19122 chr12 50473723 50473723 1 + G A SKCM 50473722 + 50473702 50473742 41 GACCAGGAGTACTGCGTGTGTGAAATGCCTTGCAACCTGAC GACCAGGAGTACTGCGTGTGTAAAATGCCTTGCAACCTGAC < 41bp 0.569751500750504 0.905062769161497 0.3704738 0.6480925 prediction 0.670622536821987 Functional Gain - ASIC1 ENSG00000110881 CDS Human protein_coding chr12:50473722 chr12:50473723 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25398 0 0 1 0 1 exosome 0.438695888706599 0.438796177531623 0.296185 0 hPsi_site_19122 iPseU_CNN:0.296185;iRNA_PseU:0 19123 chr15 74235247 74235247 1 + G A UCEC 74235246 + 74235226 74235266 41 TGTGCAAGCATCCACTTATGTGCAGAGAGCCCACCTGTACT TGTGCAAGCATCCACTTATGTACAGAGAGCCCACCTGTACT < 41bp 0.562574221913411 0.897882359018465 0.2751904 0.58941036 prediction 0.670616274210107 Functional Gain - LOXL1 ENSG00000129038 CDS Human protein_coding chr15:74235246 chr15:74235247 synonymous SNV . 0 22 hPsi_associated_SNPs_25399 0 0 0 0 2 exosome 0.437998226563364 0.439287050265318 0.17882072 0 hPsi_site_19123 iPseU_CNN:0.17882072;iRNA_PseU:0 19124 chr4 3449312 3449312 1 + C A UCEC 3449311 + 3449291 3449331 41 CTTCGGCATCGAGAAGTACATCCCGTACACCCTGTACTCGG CTTCGGCATCGAGAAGTACATACCGTACACCCTGTACTCGG < 41bp 0.479533885158122 0.835297394662792 0.5754786 0.9358375 prediction 0.670594789325584 Functional Gain - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3449311 chr4:3449312 synonymous SNV . 0 22 hPsi_associated_SNPs_25400 0 0 0 0 2 cytosol 0.438718186439417 0.438688275037709 0.7207178 0 hPsi_site_19124 iPseU_CNN:0.7207178;iRNA_PseU:0 19125 chr16 28847446 28847446 1 + G A CESC 28847445 + 28847425 28847465 41 TACATCGGACACCCCCAAGGTGAGCAGCCTGGCCAGGCGCC TACATCGGACACCCCCAAGGTAAGCAGCCTGGCCAGGCGCC < 41bp 0.556359072107596 0.89165624120524 0.32891405 0.67475766 prediction 0.670594338195287 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847445 chr16:28847446 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25401 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592995102 0.34951532 0 hPsi_site_19125 iPseU_CNN:0.34951532;iRNA_PseU:0 19126 chr17 48245335 48245335 1 + G A BLCA 48245334 + 48245314 48245354 41 GCCTACAATCGGGACAGCTTTGATACCACTCGGCAGAGGCT GCCTACAATCGGGACAGCTTTAATACCACTCGGCAGAGGCT < 41bp 0.568879382215722 0.904176336462504 0.76815665 0.91690916 prediction 0.670593908493563 Functional Gain - SGCA ENSG00000108823 CDS Human protein_coding chr17:48245334 chr17:48245335 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_25402 0 0 0 4 2 Cytosol 0.438717680621587 0.438718593251656 0.29750502 0 hPsi_site_19126 iPseU_CNN:0.29750502;iRNA_PseU:0 19127 chr3 122284747 122284747 1 + G A LUAD 122284746 + 122284726 122284766 41 AAAGGAGAGCACCAAATACTTGTTGACGAAAAACCTGTGCC AAAGGAGAGCACCAAATACTTATTGACGAAAAACCTGTGCC < 41bp 0.431930480631221 0.835295639554915 0.21549076 0.590581 prediction 0.670591279109831 Functional Gain - DTX3L ENSG00000163840 CDS Human protein_coding chr3:122284746 chr3:122284747 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25403 0 0 0 0 1 Nucleus 0.438717567552666 0.438718570515842 0.181162 0 hPsi_site_19127 iPseU_CNN:0.181162;iRNA_PseU:0 19128 chr1 114511080 114511080 1 + C A BLCA 114511079 + 114511059 114511099 41 TACAGGTCCTCTCTAGATGTTCTGCCTTCCCAAGTCTATTC TACAGGTCCTCTCTAGATGTTATGCCTTCCCAAGTCTATTC < 41bp 0.476176665930023 0.835293886932291 0.33449072 0.7105342 prediction 0.670587773864581 Functional Gain - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114511079 chr1:114511080 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_25404 0 0 1 0 1 Cytosol 0.438718335692802 0.438739533639342 0.4210684 0 hPsi_site_19128 iPseU_CNN:0.4210684;iRNA_PseU:0 19129 chr10 133930919 133930919 1 + C A OV 133930918 + 133930898 133930938 41 GGTCAAGATGCAGCAGGAGATCTCCGAGCTCAAGGGCGCCA GGTCAAGATGCAGCAGGAGATATCCGAGCTCAAGGGCGCCA < 41bp 0.529833272229358 0.865123851703155 0.28480843 0.6341235 prediction 0.670581158947594 Functional Gain - JAKMIP3 ENSG00000188385 CDS Human protein_coding chr10:133930918 chr10:133930919 synonymous SNV . 0 22 hPsi_associated_SNPs_25405 0 0 0 0 0 Cytosol 0.438718434883568 0.438915603035165 0.268247 0 hPsi_site_19129 iPseU_CNN:0.268247;iRNA_PseU:0 19130 chr7 129856077 129856077 1 + G A LUSC 129856076 + 129856056 129856096 41 TCGTGGAAGGAGAGTGAAAGTGAACACCACCCATCACCAGA TCGTGGAAGGAGAGTGAAAGTAAACACCACCCATCACCAGA < 41bp 0.441711221116354 0.835289301462516 0.18651047 0.31504712 prediction 0.670578602925032 Functional Gain - SSMEM1 ENSG00000165120 CDS Human protein_coding chr7:129856076 chr7:129856077 nonsynonymous SNV 0.840 1 22 hPsi_associated_SNPs_25406 0 0 0 0 0 exosome 0.43880625045542 0.438718593462322 0 0 hPsi_site_19130 iPseU_CNN:0;iRNA_PseU:0 19131 chr12 7026818 7026818 1 + G A UCEC 7026817 + 7026797 7026837 41 AGGGGCAGCTGAGCGGGAACTGCCCCTGTATCGCCACATTG AGGGGCAGCTGAGCGGGAACTACCCCTGTATCGCCACATTG < 41bp 0.416278301033849 0.835286295862621 0.15478021 0.36445215 prediction 0.670572591725241 Functional Gain - ENO2 ENSG00000111674 CDS Human protein_coding chr12:7026817 chr12:7026818 synonymous SNV . 0 22 hPsi_associated_SNPs_25407 0 0 1 0 2 Cytosol 0.438716759009102 0.438590423590969 0 0 hPsi_site_19131 iPseU_CNN:0;iRNA_PseU:0 19132 chr6 90604336 90604336 1 + C A UCEC 90604335 + 90604315 90604355 41 ATGTCTGGGATGATGAACAGTCAGCATTTGCCTGCAACACC ATGTCTGGGATGATGAACAGTAAGCATTTGCCTGCAACACC < 41bp 0.50107052019417 0.836356640158052 0.2543925 0.5165204 prediction 0.670572239927764 Functional Gain - GJA10 ENSG00000135355 CDS Human protein_coding chr6:90604335 chr6:90604336 stopgain 0.998 0 22 hPsi_associated_SNPs_25408 0 0 0 0 0 unknown 0.439141362296531 0.438813563095678 0.0330408 0 hPsi_site_19132 iPseU_CNN:0.0330408;iRNA_PseU:0 19133 chr8 48883359 48883359 1 + G A BLCA 48883358 + 48883338 48883378 41 AACGGCATCTGCTGTATCGATGAGTTCGACAAGATGAATGA AACGGCATCTGCTGTATCGATAAGTTCGACAAGATGAATGA < 41bp 0.437615490965699 0.835283859564587 0.3860872 0.81615365 prediction 0.670567719129174 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883358 chr8:48883359 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_25409 0 0 1 0 1 Cytosol 0.43817035865032 0.439687214888511 0.6323073 0 hPsi_site_19133 iPseU_CNN:0.6323073;iRNA_PseU:0 19134 chrX 140994421 140994421 1 + C A COAD 140994420 + 140994400 140994440 41 CCCCAGTCTCCTCTCCAGATTCCTATGACCTCCTCCTTCTC CCCCAGTCTCCTCTCCAGATTACTATGACCTCCTCCTTCTC < 41bp 0.512279084243126 0.847562447359306 0.27105275 0.42863512 prediction 0.67056672623236 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994420 chrX:140994421 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25410 0 0 0 0 0 exosome 0.438718592820061 0.438718645749446 0 0 hPsi_site_19134 iPseU_CNN:0;iRNA_PseU:0 19135 chr11 60698054 60698054 1 + G A rs2074416 60698053 + 60698033 60698073 41 CACACTCTGGACTGCCAAGCTGGACCGCTTCAAGGGCTCCA CACACTCTGGACTGCCAAGCTAGACCGCTTCAAGGGCTCCA < 41bp 0.422500983201206 0.835281136375352 0.33471942 0.66835904 prediction 0.670562272750704 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60698053 chr11:60698054 synonymous SNV . 0 22 hPsi_associated_SNPs_25411 0 0 0 0 2 Ribosome 0.438718518085815 0.438734147320219 0.33671808 0 hPsi_site_19135 iPseU_CNN:0.33671808;iRNA_PseU:0 19136 chrX 72674223 72674223 1 + C A UCEC 72674222 + 72674202 72674242 41 CATTGTGTTTCAGGTGAAAATCTGGTTTCAGAATCGCAGAG CATTGTGTTTCAGGTGAAAATATGGTTTCAGAATCGCAGAG < 41bp 0.497996645199862 0.835280754396949 0.26306087 0.39968473 prediction 0.670561508793898 Functional Gain - CDX4 ENSG00000131264 CDS Human protein_coding chrX:72674222 chrX:72674223 synonymous SNV . 0 22 hPsi_associated_SNPs_25412 0 0 0 0 1 exosome 0.438718593278661 0.438718018246706 0 0 hPsi_site_19136 iPseU_CNN:0;iRNA_PseU:0 19137 chr1 34667806 34667806 1 + G A SKCM 34667805 + 34667785 34667825 41 CCAGCCACTCTGGCTCAACCTGAACTATCCACCTCCACCAG CCAGCCACTCTGGCTCAACCTAAACTATCCACCTCCACCAG < 41bp 0.420136294567664 0.835276513553964 0.1445097 0.2713756 prediction 0.670553027107928 Functional Gain - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34667805 chr1:34667806 synonymous SNV . 0 22 hPsi_associated_SNPs_25413 0 0 0 0 1 unknown 0.438718591181037 0.438718592980557 0 0 hPsi_site_19137 iPseU_CNN:0;iRNA_PseU:0 19138 chr12 110784227 110784227 1 + C A PAAD 110784226 + 110784206 110784246 41 GCTCATAATGCCCCTGGTGATCTGGGTCTATAGCACAGACA GCTCATAATGCCCCTGGTGATATGGGTCTATAGCACAGACA < 41bp 0.490034691444037 0.835275559934665 0.20647877 0.35093224 prediction 0.67055111986933 Functional Gain - ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110784226 chr12:110784227 synonymous SNV . 0 22 hPsi_associated_SNPs_25414 0 0 1 0 0 Nucleus 0.438386058420151 0.438755647726495 0 0 hPsi_site_19138 iPseU_CNN:0;iRNA_PseU:0 19139 chr3 23932378 23932378 1 + G A rs148291247 23932377 + 23932357 23932397 41 GACATTTGGGTTCAGTTGCTTGTAGTCTGTAAATTTAAAAC GACATTTGGGTTCAGTTGCTTATAGTCTGTAAATTTAAAAC < 41bp 0.471627389669528 0.835274293417475 0.15562049 0.1957381 prediction 0.670548586834951 Functional Gain - UBE2E1 ENSG00000170142 UTR3 Human protein_coding chr3:23932377 chr3:23932378 . . 0 22 hPsi_associated_SNPs_25415 0 0 1 0 0 chromatin 0.438353374598238 0.437813738970602 0 0 hPsi_site_19139 iPseU_CNN:0;iRNA_PseU:0 19140 chr8 17063200 17063200 1 + C A READ 17063199 + 17063179 17063219 41 TGGATTTTCAAATTATAAGTTCTTTCTCCTTTTCTTGGCTT TGGATTTTCAAATTATAAGTTATTTCTCCTTTTCTTGGCTT < 41bp 0.494442262422306 0.835273898132383 0.28920346 0.4747251 prediction 0.670547796264765 Functional Gain - ZDHHC2 ENSG00000104219 CDS Human protein_coding chr8:17063199 chr8:17063200 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_25416 0 0 1 0 1 Endoplasmic reticulum 0.438716509066742 0.438718954899931 0 0 hPsi_site_19140 iPseU_CNN:0;iRNA_PseU:0 19141 chr4 88986584 88986584 1 + C A OV 88986583 + 88986563 88986603 41 AAAATACCGTGGATGACATTTCAGAGAGTCTGCGGCAAGGA AAAATACCGTGGATGACATTTAAGAGAGTCTGCGGCAAGGA < 41bp 0.477072845980109 0.835272407359874 0.22332087 0.2792806 prediction 0.670544814719747 Functional Gain - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88986583 chr4:88986584 stopgain 0.999 1 22 hPsi_associated_SNPs_25417 0 0 0 0 1 Endoplasmic reticulum 0.438747711672703 0.438728846600462 0 0 hPsi_site_19141 iPseU_CNN:0;iRNA_PseU:0 19142 chr17 6913652 6913652 1 + G A rs312462 6913651 + 6913631 6913671 41 CCGAACAGATTTGGAAAAGCTGGAAAAGGAGATTACAGCCC CCGAACAGATTTGGAAAAGCTAGAAAAGGAGATTACAGCCC < 41bp 0.434657343806302 0.835271304887948 0.18418029 0.2491124 prediction 0.670542609775896 Functional Gain - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6913651 chr17:6913652 synonymous SNV . 0 22 hPsi_associated_SNPs_25418 0 0 0 0 1 Cytosol 0.438718592995102 0.438718592994341 0 0 hPsi_site_19142 iPseU_CNN:0;iRNA_PseU:0 19143 chr17 37264391 37264391 1 + C T STAD 37264392 - 37264372 37264412 41 TACTCCGACAACTCCACAGTTGTTTACTTTGACAATGGTGA TACTCCGACAACTCCACAGTTATTTACTTTGACAATGGTGA < 41bp 0.432242603144491 0.83526989630644 0.33174056 0.46457273 prediction 0.67053979261288 Functional Gain - PLXDC1 ENSG00000161381 CDS Human protein_coding chr17:37264392 chr17:37264391 nonsynonymous SNV 0.680 0 22 hPsi_associated_SNPs_25419 0 0 0 0 1 exosome 0.438636528134426 0.43958064964503 0 0 hPsi_site_19143 iPseU_CNN:0;iRNA_PseU:0 19144 chr7 97788728 97788728 1 + C A UCS 97788727 + 97788707 97788747 41 CTACCTCCTGGTGTTTGAGTTCTGTGACTTGGTAAGTTCCT CTACCTCCTGGTGTTTGAGTTATGTGACTTGGTAAGTTCCT < 41bp 0.479395423571131 0.835267715226068 0.28478578 0.32436723 prediction 0.670535430452136 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97788727 chr7:97788728 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25420 0 0 0 0 2 Nucleus 0.438625116585868 0.438896747783322 0 0 hPsi_site_19144 iPseU_CNN:0;iRNA_PseU:0 19145 chr13 37012260 37012260 1 + C A ESCA 37012259 + 37012239 37012279 41 CAGTCTGAAGATATATCCAGTCTTGGCACAGATGTGATAAA CAGTCTGAAGATATATCCAGTATTGGCACAGATGTGATAAA < 41bp 0.475933161117034 0.835264444540984 0.2454763 0.5544882 prediction 0.670528889081968 Functional Gain - CCNA1 ENSG00000133101 CDS Human protein_coding chr13:37012259 chr13:37012260 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25421 0 0 0 0 2 exosome 0.438869891783061 0.438716064755934 0.1089764 0 hPsi_site_19145 iPseU_CNN:0.1089764;iRNA_PseU:0 19146 chr17 57058003 57058003 1 + C A BLCA 57058002 + 57057982 57058022 41 TGGAGTGGTGCTGGAGAGTTTCCCACTGCTTTCAATTTGGG TGGAGTGGTGCTGGAGAGTTTACCACTGCTTTCAATTTGGG < 41bp 0.51151968310411 0.846783383069472 0.29205102 0.36899823 prediction 0.670527399930724 Functional Gain - PPM1E ENSG00000175175 CDS Human protein_coding chr17:57058002 chr17:57058003 nonsynonymous SNV 0.741 1 22 hPsi_associated_SNPs_25422 0 0 0 0 0 Cytosol 0.438718592872769 0.438718625907129 0 0 hPsi_site_19146 iPseU_CNN:0;iRNA_PseU:0 19147 chrX 19369447 19369447 1 + C A OV 19369446 + 19369426 19369466 41 GGCATCAACCCCACAGACCATCTCATCACAGCCTACCGGGC GGCATCAACCCCACAGACCATATCATCACAGCCTACCGGGC < 41bp 0.53775906609344 0.873020608791662 0.24325484 0.27753752 prediction 0.670523085396444 Functional Gain - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19369446 chrX:19369447 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_25423 0 0 1 0 3 Ribosome 0.438700279684685 0.438718665570503 0 0 hPsi_site_19147 iPseU_CNN:0;iRNA_PseU:0 19148 chr13 28004751 28004751 1 + C A UCEC 28004750 + 28004730 28004770 41 TGCCAGCATACCAATGAACCTCTATTCAAGTAGGTACTTCA TGCCAGCATACCAATGAACCTATATTCAAGTAGGTACTTCA < 41bp 0.492177656632247 0.835258375089509 0.14065713 0.17203334 prediction 0.670516750179017 Functional Gain - GTF3A ENSG00000122034 CDS Human protein_coding chr13:28004750 chr13:28004751 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_25424 0 0 1 0 2 Cytosol 0.438718847879159 0.438822874525571 0 0 hPsi_site_19148 iPseU_CNN:0;iRNA_PseU:0 19149 chr17 43246490 43246490 1 + G A UCEC 43246489 + 43246469 43246509 41 CACTCAGAGGATGAAGATCTTGCTGGGGCTGTCGGTGGCCT CACTCAGAGGATGAAGATCTTACTGGGGCTGTCGGTGGCCT < 41bp 0.550871628126079 0.886118973226105 0.19609004 0.28069124 prediction 0.670494690200052 Functional Gain - HEXIM2 ENSG00000168517 CDS Human protein_coding chr17:43246489 chr17:43246490 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25425 0 0 0 0 0 chromatin 0.438718610004209 0.438720319350652 0 0 hPsi_site_19149 iPseU_CNN:0;iRNA_PseU:0 19150 chr13 40762898 40762898 1 + G A rs17060971 40762897 + 40762877 40762917 41 GAAAGGGTACAGAATCAAAATGTATGGCACTTGCGATTCAG GAAAGGGTACAGAATCAAAATATATGGCACTTGCGATTCAG < 41bp 0.503626372275835 0.838873532805725 0.4080738 0.5918763 prediction 0.670494321059779 Functional Gain - LINC00332 ENSG00000230710 ncRNA_exonic Human lincRNA chr13:40762897 chr13:40762898 . . 0 22 hPsi_associated_SNPs_25426 0 0 0 0 0 unknown 0.438690839264017 0.438694747794477 0.1837526 0 hPsi_site_19150 iPseU_CNN:0.1837526;iRNA_PseU:0 19151 chr14 94395474 94395474 1 + G A UCEC 94395473 + 94395453 94395493 41 CATCCCCACCAAGCCAGCCGTGCCCCCACCCATCTTCAATG CATCCCCACCAAGCCAGCCGTACCCCCACCCATCTTCAATG < 41bp 0.442741026748573 0.835243151456873 0.26339778 0.6886013 prediction 0.670486302913746 Functional Gain - FAM181A ENSG00000140067 CDS Human protein_coding chr14:94395473 chr14:94395474 synonymous SNV . 0 22 hPsi_associated_SNPs_25427 0 0 0 0 0 exosome 0.438718592204852 0.438718589834632 0.3772026 0 hPsi_site_19151 iPseU_CNN:0.3772026;iRNA_PseU:0 19152 chrX 110951368 110951368 1 + C A LUSC 110951367 + 110951347 110951387 41 GCCTAGACTTTGGGCTGCTTTCCGGATACCTGCATAAGCAA GCCTAGACTTTGGGCTGCTTTACGGATACCTGCATAAGCAA < 41bp 0.486676772689272 0.835240948595394 0.3034349 0.68356955 prediction 0.670481897190788 Functional Gain - ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951367 chrX:110951368 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_25428 0 0 1 0 0 Cytosol 0.437297629554869 0.438777161856085 0.3671391 0 hPsi_site_19152 iPseU_CNN:0.3671391;iRNA_PseU:0 19153 chr5 52778834 52778834 1 + G A BLCA 52778833 + 52778813 52778853 41 CTCGTGGACCGAGGAGGACGTGAATGACAACACACTCTTCA CTCGTGGACCGAGGAGGACGTAAATGACAACACACTCTTCA < 41bp 0.554222586674613 0.889461023325476 0.19591653 0.43339664 prediction 0.670476873301725 Functional Gain - FST ENSG00000134363 CDS Human protein_coding chr5:52778833 chr5:52778834 synonymous SNV . 0 22 hPsi_associated_SNPs_25429 0 0 0 0 1 nucleus 0.439660330167699 0.439839826762606 0 0 hPsi_site_19153 iPseU_CNN:0;iRNA_PseU:0 19154 chr4 188924595 188924595 1 + C A COAD 188924594 + 188924574 188924614 41 CTGAGAAAGCATCTCCTCATTCATGGTCCCCGAGACCACGT CTGAGAAAGCATCTCCTCATTAATGGTCCCCGAGACCACGT < 41bp 0.474676820936837 0.835233995813131 0.27664995 0.35699552 prediction 0.670467991626263 Functional Gain - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924594 chr4:188924595 nonsynonymous SNV 0.003 4 22 hPsi_associated_SNPs_25430 0 0 0 0 0 Nucleus 0.438489010289039 0.438713034311181 0 0 hPsi_site_19154 iPseU_CNN:0;iRNA_PseU:0 19155 chr3 132047150 132047150 1 + C A HNSC 132047149 + 132047129 132047169 41 CGAAGTCCCATTGACACCTTTCCCACTGACCCCATAAAGGA CGAAGTCCCATTGACACCTTTACCACTGACCCCATAAAGGA < 41bp 0.467559347567055 0.835224443480022 0.31444895 0.6662434 prediction 0.670448886960045 Functional Gain - ACPP ENSG00000014257 CDS Human protein_coding chr3:132047149 chr3:132047150 nonsynonymous SNV 0.820 4 22 hPsi_associated_SNPs_25431 0 0 0 0 2 Endoplasmic reticulum 0.438729413169796 0.438720463576883 0.3324868 0 hPsi_site_19155 iPseU_CNN:0.3324868;iRNA_PseU:0 19156 chr10 102120518 102120518 1 + C A LUAD 102120517 + 102120497 102120537 41 GCTTCCACAACTACCACCACTCCTTTCCCTATGACTACTCT GCTTCCACAACTACCACCACTACTTTCCCTATGACTACTCT < 41bp 0.49156799588261 0.835223522022065 0.25354448 0.41582042 prediction 0.67044704404413 Functional Gain - SCD ENSG00000099194 CDS Human protein_coding chr10:102120517 chr10:102120518 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_25432 0 0 1 0 1 Ribosome 0.438718592994862 0.438718595859004 0 0 hPsi_site_19156 iPseU_CNN:0;iRNA_PseU:0 19157 chr9 96214485 96214485 1 + C T BLCA 96214486 - 96214466 96214506 41 GGCCTTCTCGAGCGCGCCGTTGAAGAAGACGAAGAGCTCGA GGCCTTCTCGAGCGCGCCGTTAAAGAAGACGAAGAGCTCGA < 41bp 0.438667457327336 0.835222179547059 0.5976909 0.83511126 prediction 0.670444359094118 Functional Gain - FAM120A;FAM120AOS ENSG00000048828;ENSG00000188938 CDS Human other chr9:96214486 chr9:96214485 synonymous SNV . 0 22 hPsi_associated_SNPs_25433 0 0 0 0 1 unknown 0.438718597663685 0.438718283642581 0.47484072 0 hPsi_site_19157 iPseU_CNN:0.47484072;iRNA_PseU:0 19158 chr11 48238697 48238697 1 + G A SKCM 48238696 + 48238676 48238716 41 TGGGGTTGCTGAGATCCTTTTGATTGTGGTGATGGCCTATG TGGGGTTGCTGAGATCCTTTTAATTGTGGTGATGGCCTATG < 41bp 0.449029622049942 0.835220261766938 0.24123377 0.40181044 prediction 0.670440523533876 Functional Gain - OR4B1 ENSG00000175619 CDS Human protein_coding chr11:48238696 chr11:48238697 synonymous SNV . 0 22 hPsi_associated_SNPs_25434 0 0 0 0 0 unknown 0.439327277870881 0.438718653058527 0 0 hPsi_site_19158 iPseU_CNN:0;iRNA_PseU:0 19159 chr1 248512079 248512079 1 + G A UCEC 248512078 + 248512058 248512098 41 CAAGCTTCATCATCCACCGATGCCCAATTCAACCACCGTGA CAAGCTTCATCATCCACCGATACCCAATTCAACCACCGTGA < 41bp 0.476811726698876 0.835216762085594 0.2689717 0.68973625 prediction 0.670433524171189 Functional Gain - OR14C36 ENSG00000177174 CDS Human protein_coding chr1:248512078 chr1:248512079 nonsynonymous SNV 0.091 3 22 hPsi_associated_SNPs_25435 0 0 0 0 0 unknown 0.438715190493813 0.438761492218576 0.3794725 0 hPsi_site_19159 iPseU_CNN:0.3794725;iRNA_PseU:0 19160 chrX 47422681 47422681 1 + G A UCEC 47422680 + 47422660 47422700 41 TCTAGACAAGGCCCTGAAGGTGCGGGGTCTAAATCAGGACT TCTAGACAAGGCCCTGAAGGTACGGGGTCTAAATCAGGACT < 41bp 0.42822612306983 0.835215512157552 0.21968946 0.75852597 prediction 0.670431024315104 Functional Gain - ARAF ENSG00000078061 CDS Human protein_coding chrX:47422680 chrX:47422681 synonymous SNV . 0 22 hPsi_associated_SNPs_25436 0 0 1 0 2 Cytosol 0.438718592995518 0.438718592995141 0.51705194 0 hPsi_site_19160 iPseU_CNN:0.51705194;iRNA_PseU:0 19161 chr2 39180372 39180372 1 + G A UCEC 39180371 + 39180351 39180391 41 TGCATCTCATTGGTTCATGTTGTAGTCCTGAAAGAGGTGAG TGCATCTCATTGGTTCATGTTATAGTCCTGAAAGAGGTGAG < 41bp 0.431830475619209 0.835215098395958 0.61428577 0.73605657 prediction 0.670430196791917 Functional Gain - ARHGEF33 ENSG00000214694 CDS Human protein_coding chr2:39180371 chr2:39180372 nonsynonymous SNV 0.891 0 22 hPsi_associated_SNPs_25437 0 0 0 0 2 exosome 0.506052097056529 0.434744813740828 0.2435416 0 hPsi_site_19161 iPseU_CNN:0.2435416;iRNA_PseU:0 19162 chr11 51515317 51515317 1 + G A UCEC 51515316 + 51515296 51515336 41 TAACATGACAGAGTTTGTTTTGCTGGGGCTTACAGAGAATC TAACATGACAGAGTTTGTTTTACTGGGGCTTACAGAGAATC < 41bp 0.47350421286234 0.835214254130732 0.28211868 0.561123 prediction 0.670428508261464 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515316 chr11:51515317 synonymous SNV . 0 22 hPsi_associated_SNPs_25438 0 0 0 0 0 unknown 0.438744836583243 0.438741435632272 0.122246 0 hPsi_site_19162 iPseU_CNN:0.122246;iRNA_PseU:0 19163 chr11 825164 825164 1 + G A rs189155123 825163 + 825143 825183 41 TCATGGCCTGCTGAAATATGTGTGTGAAGAATTATTTATTT TCATGGCCTGCTGAAATATGTATGTGAAGAATTATTTATTT < 41bp 0.488003937810296 0.835213113752132 0.2383011 0.32081744 prediction 0.670426227504263 Functional Gain - PNPLA2 ENSG00000255108 ncRNA_intronic Human antisense chr11:825163 chr11:825164 . . 0 22 hPsi_associated_SNPs_25439 1 0 1 2 0 Ribosome 0.43871980952053 0.438719910501579 0 0 hPsi_site_19163 iPseU_CNN:0;iRNA_PseU:0 19164 chr2 220285264 220285264 1 + G A LUSC 220285263 + 220285243 220285283 41 TCAGGAACAGCAGGTCCAGGTGGAGATGGACATGTCTAAGC TCAGGAACAGCAGGTCCAGGTAGAGATGGACATGTCTAAGC < 41bp 0.425387531969212 0.835210236027983 0.25671038 0.36856306 prediction 0.670420472055967 Functional Gain - DES ENSG00000175084 CDS Human protein_coding chr2:220285263 chr2:220285264 synonymous SNV . 0 22 hPsi_associated_SNPs_25440 0 0 0 0 1 nucleus 0.438718593843633 0.438718494937403 0 0 hPsi_site_19164 iPseU_CNN:0;iRNA_PseU:0 19165 chr11 65735217 65735217 1 + G A rs114758666 65735216 + 65735196 65735236 41 GGACGAGGCGGAGCTGGAGCTGCAGAAGCAGCTGGAGAAGG GGACGAGGCGGAGCTGGAGCTACAGAAGCAGCTGGAGAAGG < 41bp 0.503325098184424 0.838532565367552 0.3419317 0.4856758 prediction 0.670414934366255 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65735216 chr11:65735217 synonymous SNV . 0 22 hPsi_associated_SNPs_25441 0 0 1 0 2 Cytosol 0.438718731596161 0.438718618555128 0 0 hPsi_site_19165 iPseU_CNN:0;iRNA_PseU:0 19166 chr5 167835629 167835629 1 + G A rs114682488 167835628 + 167835608 167835648 41 CTACCGAAACAGTACCTGGATGTGAGCTCCCAGACAGACAT CTACCGAAACAGTACCTGGATATGAGCTCCCAGACAGACAT < 41bp 0.42723914863636 0.835205035883511 0.34787968 0.546062 prediction 0.670410071767022 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167835628 chr5:167835629 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_25442 0 0 0 0 0 Ribosome 0.438730586991516 0.438926750118603 0.0921240000000001 0 hPsi_site_19166 iPseU_CNN:0.0921240000000001;iRNA_PseU:0 19167 chrX 115588850 115588850 1 + G A DLBC 115588849 + 115588829 115588869 41 CCATACCCTGACTGGGGAGTTGCTTTAGGCTGGTGTATGAT CCATACCCTGACTGGGGAGTTACTTTAGGCTGGTGTATGAT < 41bp 0.436206572506615 0.835204909878274 0.24837375 0.5369235 prediction 0.670409819756548 Functional Gain - SLC6A14 ENSG00000087916 CDS Human other chrX:115588849 chrX:115588850 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25443 0 0 1 0 2 cytosol 0.438718591717588 0.438718589005699 0.073847 0 hPsi_site_19167 iPseU_CNN:0.073847;iRNA_PseU:0 19168 chr11 55944701 55944701 1 + C A LUSC 55944700 + 55944680 55944720 41 AGTTGTTGCTGTTAACCTTCTCCGGAGTCATTGCCATGGCC AGTTGTTGCTGTTAACCTTCTACGGAGTCATTGCCATGGCC < 41bp 0.49611709778451 0.835202108875199 0.23748711 0.38106316 prediction 0.670404217750399 Functional Gain - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944700 chr11:55944701 nonsynonymous SNV 0.003 4 22 hPsi_associated_SNPs_25444 0 0 0 0 0 unknown 0.438718592995114 0.438718592995109 0 0 hPsi_site_19168 iPseU_CNN:0;iRNA_PseU:0 19169 chr7 44734067 44734067 1 + G A BRCA 44734066 + 44734046 44734086 41 CAACGAGATGGATGAGCCCATGTTCACGCAGCCGCTCATGT CAACGAGATGGATGAGCCCATATTCACGCAGCCGCTCATGT < 41bp 0.41969486001654 0.835200967664788 0.24467072 0.34812802 prediction 0.670401935329577 Functional Gain - OGDH ENSG00000105953 CDS Human protein_coding chr7:44734066 chr7:44734067 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25445 0 0 0 0 1 Nucleus 0.442942644028361 0.439600211175946 0 0 hPsi_site_19169 iPseU_CNN:0;iRNA_PseU:0 19170 chr12 6560460 6560460 1 + G A COAD 6560459 + 6560439 6560479 41 GGAGAAAGTCCTGTGGAGCCTGCAGAGCCTTGTCATTACAG GGAGAAAGTCCTGTGGAGCCTACAGAGCCTTGTCATTACAG < 41bp 0.449539468528424 0.835198931351453 0.23105183 0.6675838 prediction 0.670397862702906 Functional Gain - CD27 ENSG00000139193 CDS Human protein_coding chr12:6560459 chr12:6560460 nonsynonymous SNV 0.372 1 22 hPsi_associated_SNPs_25446 0 0 0 0 1 exosome 0.43871859259361 0.438722457120678 0.3351676 0 hPsi_site_19170 iPseU_CNN:0.3351676;iRNA_PseU:0 19171 chrX 115304594 115304594 1 + C A STAD 115304593 + 115304573 115304613 41 TGTCTTGCCGGAAAAGCAGTTCTCTTAGAGAAATGGAGACC TGTCTTGCCGGAAAAGCAGTTATCTTAGAGAAATGGAGACC < 41bp 0.502427551283838 0.837625854689218 0.32486445 0.6381757 prediction 0.670396606810761 Functional Gain - AGTR2 ENSG00000180772 CDS Human protein_coding chrX:115304593 chrX:115304594 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_25447 0 0 0 0 0 unknown 0.438690949102813 0.438718028976824 0.2763514 0 hPsi_site_19171 iPseU_CNN:0.2763514;iRNA_PseU:0 19172 chr10 119003558 119003558 1 + G A UCEC 119003557 + 119003537 119003577 41 AATCCAGACGGCCAGGCCAGTGCACACTGCCTCCATCTCAG AATCCAGACGGCCAGGCCAGTACACACTGCCTCCATCTCAG < 41bp 0.443352905727629 0.835198090461616 0.2621069 0.46716753 prediction 0.670396180923233 Functional Gain - SLC18A2 ENSG00000165646 CDS Human protein_coding chr10:119003557 chr10:119003558 synonymous SNV . 0 22 hPsi_associated_SNPs_25448 0 0 0 0 1 nucleus 0.438744432381096 0.438755295995248 0 0 hPsi_site_19172 iPseU_CNN:0;iRNA_PseU:0 19173 chr3 45942482 45942482 1 + C A PAAD 45942481 + 45942461 45942501 41 GTGGGTGCCTTGGGCAACAGTCTTGTTATCCTTGTCTACTG GTGGGTGCCTTGGGCAACAGTATTGTTATCCTTGTCTACTG < 41bp 0.473667107511868 0.835195334197823 0.2372339 0.45887613 prediction 0.670390668395647 Functional Gain - CCR9 ENSG00000173585 CDS Human protein_coding chr3:45942481 chr3:45942482 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_25449 0 0 0 0 0 exosome 0.438029487921585 0.438773614933101 0 0 hPsi_site_19173 iPseU_CNN:0;iRNA_PseU:0 19174 chr11 6412081 6412081 1 + G A rs368200803 6412080 + 6412060 6412100 41 CCCCGGCTCCGAGATGTCTTTGGGTGGGGGAACCTCACCTG CCCCGGCTCCGAGATGTCTTTAGGTGGGGGAACCTCACCTG < 41bp 0.553212487216611 0.888407043588155 0.38291946 0.90137225 prediction 0.670389112743089 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6412080 chr11:6412081 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_25450 0 0 1 0 1 Endoplasmic reticulum 0.438760721345654 0.438714461460866 0.8027445 0 hPsi_site_19174 iPseU_CNN:0.8027445;iRNA_PseU:0 19175 chr4 57181313 57181313 1 + C A UCEC 57181312 + 57181292 57181332 41 TCCTCCGGAGGGAAGCAGATTCTCTTTCCCAAAGTCAACCT TCCTCCGGAGGGAAGCAGATTATCTTTCCCAAAGTCAACCT < 41bp 0.529982817118218 0.865174015207927 0.67823786 0.7025039 prediction 0.670382396179417 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57181312 chr4:57181313 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_25451 0 0 0 0 0 cytosol 0.438721143300456 0.43877024556077 0.04853208 0 hPsi_site_19175 iPseU_CNN:0.04853208;iRNA_PseU:0 19176 chr3 197500350 197500350 1 + C A UCEC 197500349 + 197500329 197500369 41 GATACTCGTCAGGCAACTTTTCTTTTCAGAAGAGGCCTGAA GATACTCGTCAGGCAACTTTTATTTTCAGAAGAGGCCTGAA < 41bp 0.514477833803842 0.849669024919499 0.16598386 0.16958466 prediction 0.670382382231315 Functional Gain - FYTTD1 ENSG00000122068 CDS Human protein_coding chr3:197500349 chr3:197500350 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25452 0 0 1 0 2 Ribosome 0.438718592998305 0.438752401440794 0 0 hPsi_site_19176 iPseU_CNN:0;iRNA_PseU:0 19177 chr8 86392938 86392938 1 + G A SKCM 86392937 + 86392917 86392957 41 CTTAACTTCAATGGGGAGGGTGAACCCGAAGAACTGATGGT CTTAACTTCAATGGGGAGGGTAAACCCGAAGAACTGATGGT < 41bp 0.542764639864484 0.877949906675373 0.2623294 0.5225236 prediction 0.670370533621779 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86392937 chr8:86392938 nonsynonymous SNV 0.954 2 22 hPsi_associated_SNPs_25453 0 0 1 0 1 Ribosome 0.438718592995106 0.438718633657641 0.0450472 0 hPsi_site_19177 iPseU_CNN:0.0450472;iRNA_PseU:0 19178 chrX 149931067 149931067 1 + G A UCEC 149931066 + 149931046 149931086 41 TCACCAGAATCTCAAGGAGCTGCTGGCCGTCAGGGCGGAGC TCACCAGAATCTCAAGGAGCTACTGGCCGTCAGGGCGGAGC < 41bp 0.442269274776295 0.835180915197669 0.22003192 0.5457213 prediction 0.670361830395337 Functional Gain - MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149931066 chrX:149931067 synonymous SNV . 0 22 hPsi_associated_SNPs_25454 0 0 0 0 1 Ribosome 0.438709511799651 0.431624152644446 0.0914425999999999 0 hPsi_site_19178 iPseU_CNN:0.0914425999999999;iRNA_PseU:0 19179 chr3 122545844 122545844 1 + C A LUSC 122545843 + 122545823 122545863 41 TTCCAGCTCCCAATGGGACATCACCTCTTCTTGCTGCAGAG TTCCAGCTCCCAATGGGACATAACCTCTTCTTGCTGCAGAG < 41bp 0.48798361537478 0.835174899302278 0.18297178 0.21059284 prediction 0.670349798604557 Functional Gain - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122545843 chr3:122545844 stopgain 0.984 0 22 hPsi_associated_SNPs_25455 0 0 1 0 1 Endoplasmic reticulum 0.438718592970463 0.438718592989407 0 0 hPsi_site_19179 iPseU_CNN:0;iRNA_PseU:0 19180 chr12 57389900 57389900 1 + G A SKCM 57389899 + 57389879 57389919 41 CACCTGCTCTACTTCTTCTATGATGTCATTGACTGCTTCTC CACCTGCTCTACTTCTTCTATAATGTCATTGACTGCTTCTC < 41bp 0.433046411872896 0.835174113611286 0.1812065 0.210511 prediction 0.670348227222572 Functional Gain - GPR182 ENSG00000166856 CDS Human protein_coding chr12:57389899 chr12:57389900 nonsynonymous SNV 0.332 1 22 hPsi_associated_SNPs_25456 0 0 0 0 0 nucleus 0.438191731465478 0.438714521458627 0 0 hPsi_site_19180 iPseU_CNN:0;iRNA_PseU:0 19181 chr17 6902684 6902684 1 + G A PCPG 6902683 + 6902663 6902703 41 AGCTACCAGTTCCTCAATGGTGCCAACCCCATGCTGTTGAG AGCTACCAGTTCCTCAATGGTACCAACCCCATGCTGTTGAG < 41bp 0.56362346420619 0.898787130496348 0.24814081 0.48724267 prediction 0.670327332580316 Functional Gain - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6902683 chr17:6902684 nonsynonymous SNV 0.961 0 22 hPsi_associated_SNPs_25457 0 0 0 0 1 Cytosol 0.438724875040716 0.438687065781242 0 0 hPsi_site_19181 iPseU_CNN:0;iRNA_PseU:0 19182 chr11 123901211 123901211 1 + G A CESC 123901210 + 123901190 123901230 41 CACCCTGAGGAACAAGGAGGTGAAGAAAGCTCTGTTGAAGC CACCCTGAGGAACAAGGAGGTAAAGAAAGCTCTGTTGAAGC < 41bp 0.458816817772646 0.835157492047771 0.36642018 0.7226022 prediction 0.670314984095542 Functional Gain - OR10G8 ENSG00000234560 CDS Human protein_coding chr11:123901210 chr11:123901211 synonymous SNV . 0 22 hPsi_associated_SNPs_25458 0 0 0 0 0 unknown 0.43871880031171 0.438718528007757 0.4452044 0 hPsi_site_19182 iPseU_CNN:0.4452044;iRNA_PseU:0 19183 chr15 33023353 33023353 1 + C A UCEC 33023352 + 33023332 33023372 41 GAAATTCACTACCATGATGGTCACACTCAACTGCCCTGAAC GAAATTCACTACCATGATGGTAACACTCAACTGCCCTGAAC < 41bp 0.491989458156576 0.835154108160159 0.20119083 0.70162016 prediction 0.670308216320319 Functional Gain - GREM1 ENSG00000166923 CDS Human protein_coding chr15:33023352 chr15:33023353 synonymous SNV . 0 22 hPsi_associated_SNPs_25459 0 0 0 0 0 exosome 0.449304318716916 0.438660583688737 0.40324032 0 hPsi_site_19183 iPseU_CNN:0.40324032;iRNA_PseU:0 19184 chr7 76131686 76131686 1 + C A rs151048323 76131685 + 76131665 76131705 41 TGTGACTGACAGCAAGGCAATCGGGTCCCTAGCTGTGGGCC TGTGACTGACAGCAAGGCAATAGGGTCCCTAGCTGTGGGCC < 41bp 0.471900219793015 0.835151705032426 0.29843706 0.43443522 prediction 0.670303410064851 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76131685 chr7:76131686 synonymous SNV . 0 22 hPsi_associated_SNPs_25460 0 0 0 0 1 Nucleus 0.438718592884799 0.438718316035632 0 0 hPsi_site_19184 iPseU_CNN:0;iRNA_PseU:0 19185 chr6 135516964 135516964 1 + G A LUSC 135516963 + 135516943 135516983 41 ACCAGACCTCATGGAGACAGTGCACCTGTTTCCTGTTTGGG ACCAGACCTCATGGAGACAGTACACCTGTTTCCTGTTTGGG < 41bp 0.486001001628679 0.83514716798991 0.16423807 0.2872431 prediction 0.670294335979821 Functional Gain - MYB ENSG00000118513 CDS Human protein_coding chr6:135516963 chr6:135516964 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25461 0 0 0 2 1 Nucleus 0.437049624969848 0.438344643537647 0 0 hPsi_site_19185 iPseU_CNN:0;iRNA_PseU:0 19186 chr12 10168294 10168294 1 + C A COAD 10168293 + 10168273 10168313 41 CTCCTCTGGCAGAAGTTGGTTCTGGGAAGATGGCTCTGTTC CTCCTCTGGCAGAAGTTGGTTATGGGAAGATGGCTCTGTTC < 41bp 0.502532441025688 0.837678499765003 0.6306829 0.7628795 prediction 0.670292117478631 Functional Gain - CLEC12B ENSG00000256660 CDS Human protein_coding chr12:10168293 chr12:10168294 nonsynonymous SNV 0.752 0 22 hPsi_associated_SNPs_25462 0 0 0 0 2 exosome 0.438710452408931 0.438718602400758 0.2643932 0 hPsi_site_19186 iPseU_CNN:0.2643932;iRNA_PseU:0 19187 chr12 27950742 27950742 1 + G A UCEC 27950741 + 27950721 27950761 41 CATTCGCAAGCAGCAGATGGTGTCTGTGGAAGAGACCATCT CATTCGCAAGCAGCAGATGGTATCTGTGGAAGAGACCATCT < 41bp 0.441498997592259 0.835132647060634 0.2739125 0.72220254 prediction 0.670265294121267 Functional Gain - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27950741 chr12:27950742 synonymous SNV . 0 22 hPsi_associated_SNPs_25463 0 0 1 0 1 Ribosome 0.438699407142126 0.438709964349741 0.44440508 0 hPsi_site_19187 iPseU_CNN:0.44440508;iRNA_PseU:0 19188 chrX 105868419 105868419 1 + C A UCEC 105868418 + 105868398 105868438 41 AGTTTGCGGGTTGGTTTAGTTCTTCTGCTTCAAGACTATTC AGTTTGCGGGTTGGTTTAGTTATTCTGCTTCAAGACTATTC < 41bp 0.517303339942733 0.852433711929286 0.34177864 0.6481642 prediction 0.670260743973107 Functional Gain - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105868418 chrX:105868419 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_25464 0 0 0 0 2 nucleus 0.438718594118048 0.438717011116635 0.2963284 0 hPsi_site_19188 iPseU_CNN:0.2963284;iRNA_PseU:0 19189 chr6 132892264 132892264 1 + G A LGG 132892263 + 132892243 132892283 41 GGTCACAGTGGTAGCATTTATGATTTCATGGTTACCATATA GGTCACAGTGGTAGCATTTATAATTTCATGGTTACCATATA < 41bp 0.540434050334627 0.875561642534113 0.30896485 0.3603763 prediction 0.670255184398971 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132892263 chr6:132892264 nonsynonymous SNV 0.209 0 22 hPsi_associated_SNPs_25465 0 0 0 0 0 unknown 0.438719443525681 0.438719339668883 0 0 hPsi_site_19189 iPseU_CNN:0;iRNA_PseU:0 19190 chr11 134188543 134188543 1 + G A STAD 134188542 + 134188522 134188562 41 CAGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAA CAGAACTGGAATTATGGATTTATGTTCATCAATGGACGTAA < 41bp 0.562437165350344 0.897562026157277 0.3041676 0.3221141 prediction 0.670249721613867 Functional Gain - GLB1L3 ENSG00000166105 CDS Human protein_coding chr11:134188542 chr11:134188543 nonsynonymous SNV 0.844 4 22 hPsi_associated_SNPs_25466 0 0 1 0 2 Nucleus 0.442400424121764 0.457821799723171 0 0 hPsi_site_19190 iPseU_CNN:0;iRNA_PseU:0 19191 chr15 64449083 64449083 1 + G T SKCM 64449084 - 64449064 64449104 41 GAGCATCTACGGTGAGCGCTTCCCCGATGAGAACTTCAAAC GAGCATCTACGGTGAGCGCTTACCCGATGAGAACTTCAAAC < 41bp 0.491453441511585 0.835118668551362 0.28578058 0.7252759 prediction 0.670237337102724 Functional Gain - PPIB ENSG00000166794 CDS Human protein_coding chr15:64449084 chr15:64449083 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_25467 0 0 1 0 1 Ribosome 0.438718568989569 0.438715440145278 0.4505518 0 hPsi_site_19191 iPseU_CNN:0.4505518;iRNA_PseU:0 19192 chr19 16145653 16145653 1 + G A rs73513754 16145652 + 16145632 16145672 41 TTTTTGGAAAAAATATCTGTTGTGGTAAACAGTGCTGCATC TTTTTGGAAAAAATATCTGTTATGGTAAACAGTGCTGCATC < 41bp 0.52644656355388 0.861559395160926 0.3090677 0.29449764 prediction 0.670225663214091 Functional Gain - LINC00905 ENSG00000167459;ENSG00000267609 ncRNA_exonic Human other chr19:16145652 chr19:16145653 . . 0 22 hPsi_associated_SNPs_25468 0 0 0 0 0 unknown 0.438717717890028 0.438718566163014 0 0 hPsi_site_19192 iPseU_CNN:0;iRNA_PseU:0 19193 chr17 46133907 46133907 1 + C A LAML 46133906 + 46133886 46133926 41 GCAGGCGAGGGCGCGGAAGCTCTGGCACGGAACCTGCTAGT GCAGGCGAGGGCGCGGAAGCTATGGCACGGAACCTGCTAGT < 41bp 0.53545956644999 0.870570188221168 0.31795067 0.64182866 prediction 0.670221243542355 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133906 chr17:46133907 nonsynonymous SNV 0.981 3 22 hPsi_associated_SNPs_25469 0 0 1 0 1 Ribosome 0.438718593033754 0.438798397655411 0.28365732 0 hPsi_site_19193 iPseU_CNN:0.28365732;iRNA_PseU:0 19194 chr14 20444055 20444055 1 + C A UCEC 20444054 + 20444034 20444074 41 TGCCTGCCTGGCCCAGATTTTCTTTGTTCATCTCTTCACTG TGCCTGCCTGGCCCAGATTTTATTTGTTCATCTCTTCACTG < 41bp 0.511873548300577 0.846973322084406 0.30625916 0.33239335 prediction 0.670199547567659 Functional Gain - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20444054 chr14:20444055 nonsynonymous SNV 0.957 2 22 hPsi_associated_SNPs_25470 0 0 0 0 0 unknown 0.43875034459585 0.438719134048159 0 0 hPsi_site_19194 iPseU_CNN:0;iRNA_PseU:0 19195 chr1 18152511 18152511 1 + C A SARC 18152510 + 18152490 18152530 41 TGCGATAGACGCTGCCTGTTTCAGCTGGAGACAGTCGCCGT TGCGATAGACGCTGCCTGTTTAAGCTGGAGACAGTCGCCGT < 41bp 0.51798609126395 0.853085738755071 0.7353257 0.85954434 prediction 0.670199294982241 Functional Gain - ACTL8 ENSG00000117148 CDS Human protein_coding chr1:18152510 chr1:18152511 nonsynonymous SNV 0.029 1 22 hPsi_associated_SNPs_25471 0 0 0 0 0 unknown 0.438921149351569 0.438745173247701 0.24843728 0 hPsi_site_19195 iPseU_CNN:0.24843728;iRNA_PseU:0 19196 chr11 66244312 66244312 1 + G A rs114914888 66244311 + 66244291 66244331 41 CAAATGGCAACACGGCTTCATGCGTGCCAGGATCAGAGTAC CAAATGGCAACACGGCTTCATACGTGCCAGGATCAGAGTAC < 41bp 0.527593821407872 0.862693167295856 0.18081504 0.8172964 prediction 0.670198691775968 Functional Gain - LOC101928069 ENSG00000255517 ncRNA_intronic Human antisense chr11:66244311 chr11:66244312 . . 0 22 hPsi_associated_SNPs_25472 0 0 0 0 0 unknown 0.4378642068411 0.438280942939526 0.6345928 0 hPsi_site_19196 iPseU_CNN:0.6345928;iRNA_PseU:0 19197 chr10 82187096 82187096 1 + C A UCEC 82187095 + 82187075 82187115 41 TCTCACTCCATAGAAAAAGTTCTATGGTCCACAAAGGCGGA TCTCACTCCATAGAAAAAGTTATATGGTCCACAAAGGCGGA < 41bp 0.485541774590598 0.835089494671123 0.4558977 0.66655016 prediction 0.670178989342246 Functional Gain - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82187095 chr10:82187096 nonsynonymous SNV 0.960 3 22 hPsi_associated_SNPs_25473 0 0 1 0 1 Ribosome 0.438713362563662 0.439068800474481 0.33310032 0 hPsi_site_19197 iPseU_CNN:0.33310032;iRNA_PseU:0 19198 chr2 203826014 203826014 1 + G A UCEC 203826013 + 203825993 203826033 41 AGTGAGACTGAATTAGAAAGTGTCCTAACATTTCACAAGCA AGTGAGACTGAATTAGAAAGTATCCTAACATTTCACAAGCA < 41bp 0.444153816694441 0.83508907201903 0.32046077 0.56015676 prediction 0.670178144038059 Functional Gain - CARF ENSG00000138380 CDS Human protein_coding chr2:203826013 chr2:203826014 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_25474 0 0 1 1 1 nucleus 0.438601182804489 0.438712867250007 0.12031352 0 hPsi_site_19198 iPseU_CNN:0.12031352;iRNA_PseU:0 19199 chr3 8787229 8787229 1 + G A BRCA 8787228 + 8787208 8787248 41 GCAGGTGGATTTTGAAGACGTGATCGCAGAGCCTGTGGGCA GCAGGTGGATTTTGAAGACGTAATCGCAGAGCCTGTGGGCA < 41bp 0.54709377049778 0.882182584579192 0.17681551 0.44104427 prediction 0.670177628162825 Functional Gain - CAV3 ENSG00000182533 CDS Human protein_coding chr3:8787228 chr3:8787229 synonymous SNV . 0 22 hPsi_associated_SNPs_25475 0 0 0 0 1 exosome 0.438384214866525 0.438718926341739 0 0 hPsi_site_19199 iPseU_CNN:0;iRNA_PseU:0 19200 chr5 137726715 137726715 1 + C A UCEC 137726714 + 137726694 137726734 41 CCTTTCAGAATTCAAGAAATTCTATTCTGGCCTCTTCTGGA CCTTTCAGAATTCAAGAAATTATATTCTGGCCTCTTCTGGA < 41bp 0.498027735501774 0.835083941191588 0.2606944 0.33454058 prediction 0.670167882383176 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137726714 chr5:137726715 nonsynonymous SNV 0.958 1 22 hPsi_associated_SNPs_25476 0 0 1 0 1 Nucleus 0.438582754478997 0.438730745243061 0 0 hPsi_site_19200 iPseU_CNN:0;iRNA_PseU:0 19201 chr1 167663351 167663351 1 + G A GBM 167663350 + 167663330 167663370 41 TGACAGGCCAATTTAACCTTTGACCCAGCTGCTCTACTGCC TGACAGGCCAATTTAACCTTTAACCCAGCTGCTCTACTGCC < 41bp 0.416716220243521 0.835076412352945 0.15378115 0.27132577 prediction 0.670152824705891 Functional Gain - RCSD1 ENSG00000198771 CDS Human protein_coding chr1:167663350 chr1:167663351 nonsynonymous SNV 0.390 2 22 hPsi_associated_SNPs_25477 0 0 0 0 1 chromatin 0.438721517950268 0.438718607976103 0 0 hPsi_site_19201 iPseU_CNN:0;iRNA_PseU:0 19202 chr12 132636730 132636730 1 + C A UCEC 132636729 + 132636709 132636749 41 CATCGCGCCACTGCTGGAGCTCACGGCCTACGAGGTGCGGA CATCGCGCCACTGCTGGAGCTAACGGCCTACGAGGTGCGGA < 41bp 0.501850361969532 0.836925760673782 0.13927007 0.31365693 prediction 0.670150797408499 Functional Gain - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132636729 chr12:132636730 synonymous SNV . 0 22 hPsi_associated_SNPs_25478 0 0 0 0 1 Ribosome 0.438820229692477 0.438808374589082 0 0 hPsi_site_19202 iPseU_CNN:0;iRNA_PseU:0 19203 chr5 121776442 121776442 1 + G A SARC 121776441 + 121776421 121776461 41 CACAGCATGGCTACCTTGGATGCATACAGGTACACAGGCCC CACAGCATGGCTACCTTGGATACATACAGGTACACAGGCCC < 41bp 0.546777379713426 0.881849604407569 0.2249786 0.7890275 prediction 0.670144449388286 Functional Gain - SNCAIP ENSG00000064692 CDS Human protein_coding chr5:121776441 chr5:121776442 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25479 0 0 0 0 1 exosome 0.438747246962783 0.438443456851722 0.578055 0 hPsi_site_19203 iPseU_CNN:0.578055;iRNA_PseU:0 19204 chr10 103898696 103898696 1 + G A BLCA 103898695 + 103898675 103898715 41 CGTGACCTCATCACCCCAGTTGACCCACTGGGGCCCAGTAC CGTGACCTCATCACCCCAGTTAACCCACTGGGGCCCAGTAC < 41bp 0.429329161868277 0.835071445877647 0.22312161 0.29545152 prediction 0.670142891755294 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103898695 chr10:103898696 nonsynonymous SNV 0.073 1 22 hPsi_associated_SNPs_25480 0 0 1 0 2 Cytosol 0.438455860252383 0.43871713701605 0 0 hPsi_site_19204 iPseU_CNN:0;iRNA_PseU:0 19205 chr14 100317312 100317312 1 + C A COAD 100317311 + 100317291 100317331 41 TCAGCTCTAGCTGATGTGGTTCGGCGGCTGAACATTACTGA TCAGCTCTAGCTGATGTGGTTAGGCGGCTGAACATTACTGA < 41bp 0.487785783427572 0.835066117212882 0.23751426 0.3044386 prediction 0.670132234425764 Functional Gain - EML1 ENSG00000066629 CDS Human protein_coding chr14:100317311 chr14:100317312 synonymous SNV . 0 22 hPsi_associated_SNPs_25481 0 0 1 0 1 Nucleus 0.438711266498354 0.438264889287379 0 0 hPsi_site_19205 iPseU_CNN:0;iRNA_PseU:0 19206 chr18 8824745 8824745 1 + C A UCEC 8824744 + 8824724 8824764 41 GTTCCAGCGTCTAATGGACATCTCCCCCTTCCTGCCTGAGA GTTCCAGCGTCTAATGGACATATCCCCCTTCCTGCCTGAGA < 41bp 0.48000766084524 0.835060941452545 0.34412795 0.7920263 prediction 0.670121882905091 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8824744 chr18:8824745 synonymous SNV . 0 22 hPsi_associated_SNPs_25482 0 0 1 0 1 Nucleus 0.438800934052642 0.438730131330432 0.5840526 0 hPsi_site_19206 iPseU_CNN:0.5840526;iRNA_PseU:0 19207 chr19 9204097 9204097 1 + G A UCEC 9204096 + 9204076 9204116 41 CTCCCACCTCCACACCCCCATGTACTTCTTCCTGGCCAACC CTCCCACCTCCACACCCCCATATACTTCTTCCTGGCCAACC < 41bp 0.550386385965405 0.885446930974046 0.19962218 0.45454803 prediction 0.670121090017283 Functional Gain - OR1M1 ENSG00000170929 CDS Human protein_coding chr19:9204096 chr19:9204097 nonsynonymous SNV 0.883 1 22 hPsi_associated_SNPs_25483 0 0 0 0 0 unknown 0.439020705614844 0.438722948252093 0 0 hPsi_site_19207 iPseU_CNN:0;iRNA_PseU:0 19208 chr1 104114233 104114233 1 + C A UCEC 104114232 + 104114212 104114252 41 ACTTCAAAGCAAAATGAAGTTCTTTCTGTTGCTTTTCACCA ACTTCAAAGCAAAATGAAGTTATTTCTGTTGCTTTTCACCA < 41bp 0.494107269400884 0.835058645843727 0.55007684 0.7327301 prediction 0.670117291687455 Functional Gain - AMY2B ENSG00000240038 CDS Human protein_coding chr1:104114232 chr1:104114233 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_25484 0 0 0 0 1 exosome 0.43898756321187 0.450796641529758 0.36530652 0 hPsi_site_19208 iPseU_CNN:0.36530652;iRNA_PseU:0 19209 chr15 57731573 57731573 1 + C A rs7182648 57731572 + 57731552 57731592 41 ACGGGGCTTCATGTGCCCACTCCAGGCCTCCCCAGCCGAAC ACGGGGCTTCATGTGCCCACTACAGGCCTCCCCAGCCGAAC < 41bp 0.477479383269327 0.835058270890382 0.32565582 0.4640086 prediction 0.670116541780763 Functional Gain - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57731572 chr15:57731573 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_25485 0 0 0 0 0 cytosol 0.438705574828499 0.436843373451113 0 0 hPsi_site_19209 iPseU_CNN:0;iRNA_PseU:0 19210 chr5 56207077 56207077 1 + C A UCEC 56207076 + 56207056 56207096 41 AGGAACATTACTGAAAGTTTTCCAGGCTCTATTCTTAAATG AGGAACATTACTGAAAGTTTTACAGGCTCTATTCTTAAATG < 41bp 0.50460464504573 0.839662720600378 0.39418554 0.5164636 prediction 0.670116151109296 Functional Gain - SETD9 ENSG00000155542 CDS Human protein_coding chr5:56207076 chr5:56207077 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_25486 0 0 0 0 1 Cytosol 0.438718381007295 0.438719931418748 0.0329272 0 hPsi_site_19210 iPseU_CNN:0.0329272;iRNA_PseU:0 19211 chr17 26800797 26800797 1 + C A UCEC 26800796 + 26800776 26800816 41 ATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCAT ATCGTGTTCTTCGTGCCCATTATCCTGCTGCCTCTGCCCAT < 41bp 0.505132505373656 0.840188930015039 0.69601625 0.91656774 prediction 0.670112849282765 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26800796 chr17:26800797 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_25487 0 0 0 0 1 unknown 0.438720470255571 0.438718591206494 0.44110298 0 hPsi_site_19211 iPseU_CNN:0.44110298;iRNA_PseU:0 19212 chr19 52723453 52723453 1 + C A READ 52723452 + 52723432 52723472 41 TCTCCTGTAGGGAGTGGAGTTCTTTGATGAGAAACTTAACT TCTCCTGTAGGGAGTGGAGTTATTTGATGAGAAACTTAACT < 41bp 0.476592885989232 0.835053919517263 0.63017094 0.6849474 prediction 0.670107839034527 Functional Gain - PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52723452 chr19:52723453 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_25488 0 0 1 0 2 Ribosome 0.438581881027346 0.438717563758783 0.10955292 0 hPsi_site_19212 iPseU_CNN:0.10955292;iRNA_PseU:0 19213 chr9 134165639 134165639 1 + G A LGG 134165638 + 134165618 134165658 41 GGGCATCGCCTTCAACTCCCTGCTGGCCATCGATATCTGTA GGGCATCGCCTTCAACTCCCTACTGGCCATCGATATCTGTA < 41bp 0.555828674440827 0.890879923763538 0.1865964 0.3771417 prediction 0.670102498645423 Functional Gain - PLPP7 ENSG00000160539 CDS Human protein_coding chr9:134165638 chr9:134165639 synonymous SNV . 0 22 hPsi_associated_SNPs_25489 0 0 0 0 0 exosome 0.438839505095304 0.437724203237361 0 0 hPsi_site_19213 iPseU_CNN:0;iRNA_PseU:0 19214 chr7 100193206 100193206 1 + C A UCEC 100193205 + 100193185 100193225 41 TCTTGCACGCTAGATCCTATTCTGTGCTCTTGGCTACAACC TCTTGCACGCTAGATCCTATTATGTGCTCTTGGCTACAACC < 41bp 0.475587298469839 0.835050765808311 0.41750893 0.4089771 prediction 0.670101531616621 Functional Gain - FBXO24 ENSG00000106336 CDS Human protein_coding chr7:100193205 chr7:100193206 nonsynonymous SNV 0.810 1 22 hPsi_associated_SNPs_25490 0 0 0 0 1 exosome 0.438730337842466 0.438719755031873 0 0 hPsi_site_19214 iPseU_CNN:0;iRNA_PseU:0 19215 chr10 46999914 46999914 1 + G A UCEC 46999913 + 46999893 46999933 41 AGGCGGCCCCAGTGGCGGCCTGCAAGGCTGTGGCCACCAGT AGGCGGCCCCAGTGGCGGCCTACAAGGCTGTGGCCACCAGT < 41bp 0.436821171448625 0.835048560456023 0.31149578 0.49638957 prediction 0.670097120912045 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:46999913 chr10:46999914 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25491 0 0 0 0 0 exosome 0.438718592899138 0.438718592924808 0 0 hPsi_site_19215 iPseU_CNN:0;iRNA_PseU:0 19216 chr3 136574042 136574042 1 + C A COAD 136574041 + 136574021 136574061 41 ACATTGTTGATGAAGACAATTCTTTGTTAAATGCCTGGAAA ACATTGTTGATGAAGACAATTATTTGTTAAATGCCTGGAAA < 41bp 0.509663638318894 0.844708344877026 0.3053624 0.4157426 prediction 0.670089413116263 Functional Gain - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136574041 chr3:136574042 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_25492 0 0 1 0 0 nucleolus 0.438720033653584 0.438720164289385 0 0 hPsi_site_19216 iPseU_CNN:0;iRNA_PseU:0 19217 chr4 73013143 73013143 1 + C A LUAD 73013142 + 73013122 73013162 41 TCATGGCTGCCCCTGTGGACTCTAATGATGCTCTCAGACTA TCATGGCTGCCCCTGTGGACTATAATGATGCTCTCAGACTA < 41bp 0.525282187055051 0.860318656611405 0.28714257 0.34741315 prediction 0.670072939112709 Functional Gain - NPFFR2 ENSG00000056291 CDS Human protein_coding chr4:73013142 chr4:73013143 nonsynonymous SNV 0.895 0 22 hPsi_associated_SNPs_25493 0 0 0 0 0 nucleoplasm 0.438718640631857 0.438718502873023 0 0 hPsi_site_19217 iPseU_CNN:0;iRNA_PseU:0 19218 chr18 60206974 60206974 1 + C A rs150018974 60206973 + 60206953 60206993 41 AGCAGCTTAATAGAGCAAGCTCCAATACCTCAGGACGGACT AGCAGCTTAATAGAGCAAGCTACAATACCTCAGGACGGACT < 41bp 0.517397035117663 0.852425936088297 0.31272894 0.6168414 prediction 0.670057801941269 Functional Gain - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60206973 chr18:60206974 nonsynonymous SNV 0.584 0 22 hPsi_associated_SNPs_25494 0 0 1 0 2 chromatin 0.438718592998866 0.438718479102191 0.2336828 0 hPsi_site_19218 iPseU_CNN:0.2336828;iRNA_PseU:0 19219 chr1 16044401 16044401 1 + G A rs16851970 16044400 + 16044380 16044420 41 GTTTGCAGGCCGTGCCTGGCTGTACCTGGCCCTCAACGAGA GTTTGCAGGCCGTGCCTGGCTATACCTGGCCCTCAACGAGA < 41bp 0.559735545986985 0.894762724160866 0.18903616 0.31890658 prediction 0.670054356347762 Functional Gain - PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16044400 chr1:16044401 synonymous SNV . 0 22 hPsi_associated_SNPs_25495 0 0 1 0 2 chromatin 0.439177042834096 0.438919379058152 0 0 hPsi_site_19219 iPseU_CNN:0;iRNA_PseU:0 19220 chr15 41099974 41099974 1 + G A KIRP 41099973 + 41099953 41099993 41 GGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCC GGCCCAGGACTTGGCCGGCGTAATCTCAGCTCTGCAGACCC < 41bp 0.446627668669681 0.835025401991685 0.29564038 0.799413 prediction 0.67005080398337 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41099973 chr15:41099974 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25496 0 0 1 0 0 Ribosome 0.439161771654251 0.438718595065487 0.598826 0 hPsi_site_19220 iPseU_CNN:0.598826;iRNA_PseU:0 19221 chrX 70389735 70389735 1 + C A rs766078372 70389734 + 70389714 70389754 41 CACCACGAGTGTGAGGCCGGTCCCCCCCATGACACGCTGCG CACCACGAGTGTGAGGCCGGTACCCCCCATGACACGCTGCG < 41bp 0.533119559474818 0.868144463881417 0.22156265 0.86786324 prediction 0.670049808813198 Functional Gain - NLGN3 ENSG00000196338 CDS Human protein_coding chrX:70389734 chrX:70389735 nonsynonymous SNV 0.951 1 22 hPsi_associated_SNPs_25497 0 0 0 0 0 exosome 0.438711120530213 0.442395739517763 0.73572648 0 hPsi_site_19221 iPseU_CNN:0.73572648;iRNA_PseU:0 19222 chr1 162535934 162535934 1 + G A UCEC 162535933 + 162535913 162535953 41 CTACGTTTCTGGAATGAGCTTGAAGAAGCCCAACAGGTAGA CTACGTTTCTGGAATGAGCTTAAAGAAGCCCAACAGGTAGA < 41bp 0.552242137433969 0.887261644125445 0.26245528 0.5413722 prediction 0.670039013382954 Functional Gain - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162535933 chr1:162535934 nonsynonymous SNV 0.923 0 22 hPsi_associated_SNPs_25498 0 0 1 0 0 Ribosome 0.438718593000593 0.438712005241136 0.0827443999999999 0 hPsi_site_19222 iPseU_CNN:0.0827443999999999;iRNA_PseU:0 19223 chr20 13279656 13279656 1 + G A SKCM 13279655 + 13279635 13279675 41 AAAGAAGTACATGCACAAGGTGATGAATGACCTGCCCAGCT AAAGAAGTACATGCACAAGGTAATGAATGACCTGCCCAGCT < 41bp 0.42278089006332 0.835018777812705 0.25684243 0.44161943 prediction 0.670037555625409 Functional Gain - ISM1 ENSG00000101230 CDS Human protein_coding chr20:13279655 chr20:13279656 synonymous SNV . 0 22 hPsi_associated_SNPs_25499 0 0 0 0 1 exosome 0.438717512833851 0.438717905586388 0 0 hPsi_site_19223 iPseU_CNN:0;iRNA_PseU:0 19224 chr11 114118080 114118080 1 + G A UCEC 114118079 + 114118059 114118099 41 GCTGGAGACGCACTATAGGGTGCACACAGGTACCGAAGGCC GCTGGAGACGCACTATAGGGTACACACAGGTACCGAAGGCC < 41bp 0.552868641578891 0.887885059844496 0.28581864 0.87268955 prediction 0.67003283653121 Functional Gain - ZBTB16 ENSG00000109906 CDS Human protein_coding chr11:114118079 chr11:114118080 synonymous SNV . 0 22 hPsi_associated_SNPs_25500 0 0 0 0 1 Nucleus 0.439939250026448 0.453521750684769 0.7453791 0 hPsi_site_19224 iPseU_CNN:0.7453791;iRNA_PseU:0 19225 chr12 7355220 7355220 1 + G A LUSC 7355219 + 7355199 7355239 41 TTGTCGCAGGGTACATCAGATGCCTGGGTTGACCAGTTCAC TTGTCGCAGGGTACATCAGATACCTGGGTTGACCAGTTCAC < 41bp 0.565058989496003 0.900073828531964 0.29193866 0.44463882 prediction 0.670029678071922 Functional Gain - PEX5 ENSG00000139197 CDS Human protein_coding chr12:7355219 chr12:7355220 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_25501 0 0 0 0 1 Ribosome 0.438846754441719 0.440143252788301 0 0 hPsi_site_19225 iPseU_CNN:0;iRNA_PseU:0 19226 chr15 102303346 102303346 1 + G A rs558707660 102303345 + 102303325 102303365 41 TGGGAACGAGAAGACACTCGTGGAGGCGTCAGCAGAGAAGG TGGGAACGAGAAGACACTCGTAGAGGCGTCAGCAGAGAAGG < 41bp 0.483310172784693 0.835010199310201 0.1959261 0.23932976 prediction 0.670020398620403 Functional Gain - LOC100128108;OR4F6 ENSG00000259660 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:102303345 chr15:102303346 . . 0 22 hPsi_associated_SNPs_25502 0 0 0 0 0 unknown 0.438718597211577 0.439448941363279 0 0 hPsi_site_19226 iPseU_CNN:0;iRNA_PseU:0 19227 chr17 32583293 32583293 1 + C A UCEC 32583292 + 32583272 32583312 41 TAACTTCACCAATAGGAAGATCTCAGTGCAGAGGCTCGCGA TAACTTCACCAATAGGAAGATATCAGTGCAGAGGCTCGCGA < 41bp 0.513873255494542 0.848882568340072 0.31001002 0.40607262 prediction 0.670018625691059 Functional Gain - CCL2 ENSG00000108691 CDS Human protein_coding chr17:32583292 chr17:32583293 synonymous SNV . 0 22 hPsi_associated_SNPs_25503 0 0 0 0 2 cytosol 0.438719951033878 0.438718597746496 0 0 hPsi_site_19227 iPseU_CNN:0;iRNA_PseU:0 19228 chr13 28830579 28830579 1 + C A UCEC 28830578 + 28830558 28830598 41 CATCTGTTAATAATCCTGTTTCTCAGACTCCGTCTTCTGGT CATCTGTTAATAATCCTGTTTATCAGACTCCGTCTTCTGGT < 41bp 0.479928308611397 0.835005485967248 0.3169255 0.290582 prediction 0.670010971934497 Functional Gain - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28830578 chr13:28830579 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25504 0 0 1 0 1 Ribosome 0.438713388528558 0.438916332041049 0 0 hPsi_site_19228 iPseU_CNN:0;iRNA_PseU:0 19229 chr2 219266367 219266367 1 + G A BLCA 219266366 + 219266346 219266386 41 TTCTGCTGTGTCTGCCGGGATGATGGGGAGGCCCTGCCTGC TTCTGCTGTGTCTGCCGGGATAATGGGGAGGCCCTGCCTGC < 41bp 0.425597640034255 0.83499418065306 0.29100984 0.5013115 prediction 0.669988361306119 Functional Gain - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219266366 chr2:219266367 nonsynonymous SNV 0.976 1 22 hPsi_associated_SNPs_25505 0 0 1 0 2 Cytosol 0.438718586321681 0.438719112489533 0.00262300000000004 0 hPsi_site_19229 iPseU_CNN:0.00262300000000004;iRNA_PseU:0 19230 chr1 36054008 36054008 1 + C A LUAD 36054007 + 36053987 36054027 41 CTGGTGGGCGGCATCACAAATCCTGGTGAGGTCTTCTGCTC CTGGTGGGCGGCATCACAAATACTGGTGAGGTCTTCTGCTC < 41bp 0.480121952655447 0.834990776011052 0.18376657 0.27254957 prediction 0.669981552022104 Functional Gain - TFAP2E ENSG00000116819 CDS Human protein_coding chr1:36054007 chr1:36054008 nonsynonymous SNV 0.090 4 22 hPsi_associated_SNPs_25506 0 0 0 0 1 nucleoplasm 0.438718591555543 0.438800020826101 0 0 hPsi_site_19230 iPseU_CNN:0;iRNA_PseU:0 19231 chr2 54036377 54036377 1 + C A UCEC 54036376 + 54036356 54036396 41 CGGTTGGTGGAAATATGAATTCTGCTATGGCAAACATGTAC CGGTTGGTGGAAATATGAATTATGCTATGGCAAACATGTAC < 41bp 0.491506027313349 0.834978019530223 0.25823915 0.38057566 prediction 0.669956039060446 Functional Gain - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54036376 chr2:54036377 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25507 0 0 1 0 1 Endoplasmic reticulum 0.445147489240871 0.438574668388844 0 0 hPsi_site_19231 iPseU_CNN:0;iRNA_PseU:0 19232 chr11 5373488 5373488 1 + G A LUAD 5373487 + 5373467 5373507 41 TGCTGCATCCTGGTCTTCTATGTCACTGTAGTTTGTCTGAC TGCTGCATCCTGGTCTTCTATATCACTGTAGTTTGTCTGAC < 41bp 0.46082964141183 0.834973973695399 0.17845416 0.19099635 prediction 0.669947947390799 Functional Gain - OR51B6 ENSG00000176239 CDS Human protein_coding chr11:5373487 chr11:5373488 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25508 0 0 0 0 0 unknown 0.419401297121541 0.430285851208091 0 0 hPsi_site_19232 iPseU_CNN:0;iRNA_PseU:0 19233 chr1 1246312 1246312 1 + G A SKCM 1246311 + 1246291 1246331 41 ACGGAGGATGACGGCTGTGCTGGTGGCCGTGGGGCTGGGGG ACGGAGGATGACGGCTGTGCTAGTGGCCGTGGGGCTGGGGG < 41bp 0.436924657663495 0.834973303937376 0.24813294 0.5528518 prediction 0.669946607874753 Functional Gain - PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1246311 chr1:1246312 synonymous SNV . 0 22 hPsi_associated_SNPs_25509 0 0 1 0 1 Ribosome 0.438718592221615 0.43874306553897 0.1057036 0 hPsi_site_19233 iPseU_CNN:0.1057036;iRNA_PseU:0 19234 chr19 11546462 11546462 1 + G A rs138496627 11546461 + 11546441 11546481 41 AGAAATTTCCGCTTTCTTTCTGCAGCAGGAACCGCGGCTGC AGAAATTTCCGCTTTCTTTCTACAGCAGGAACCGCGGCTGC < 41bp 0.456046559906485 0.834970471855356 0.31900263 0.36088985 prediction 0.669940943710711 Functional Gain - PRKCSH ENSG00000130175 UTR5 Human protein_coding chr19:11546461 chr19:11546462 . . 0 22 hPsi_associated_SNPs_25510 1 0 1 0 2 Nucleus 0.43871859296546 0.438718592919031 0 0 hPsi_site_19234 iPseU_CNN:0;iRNA_PseU:0 19235 chr22 42478007 42478007 1 + G A UCEC 42478006 + 42477986 42478026 41 ACACTCATTAGCAAGAACTTTGCTGCTCTACTTGAGGAACA ACACTCATTAGCAAGAACTTTACTGCTCTACTTGAGGAACA < 41bp 0.551061046876821 0.886028674162794 0.25634795 0.43369567 prediction 0.669935254571944 Functional Gain - SMDT1 ENSG00000183172 CDS Human protein_coding chr22:42478006 chr22:42478007 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25511 0 0 1 0 2 Cytosol 0.438397145254275 0.43873424136152 0 0 hPsi_site_19235 iPseU_CNN:0;iRNA_PseU:0 19236 chrX 122387342 122387342 1 + C A UCEC 122387341 + 122387321 122387361 41 AAGGGCGCTATTCTGAGTCTTCTGGGTCATTACAAGTGGGA AAGGGCGCTATTCTGAGTCTTATGGGTCATTACAAGTGGGA < 41bp 0.491450279406029 0.83496532224439 0.20828626 0.26398695 prediction 0.669930644488781 Functional Gain - GRIA3 ENSG00000125675 CDS Human protein_coding chrX:122387341 chrX:122387342 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25512 0 0 0 0 1 Nucleus 0.438718592625147 0.438723076576795 0 0 hPsi_site_19236 iPseU_CNN:0;iRNA_PseU:0 19237 chr8 61777946 61777946 1 + G A BLCA 61777945 + 61777925 61777965 41 GTTTGGCTTGGGCGGGCTGTTGAATAACCCTCTGTCAGCTG GTTTGGCTTGGGCGGGCTGTTAAATAACCCTCTGTCAGCTG < 41bp 0.45223814620757 0.834961019405757 0.6628758 0.8747157 prediction 0.669922038811514 Functional Gain - CHD7 ENSG00000171316 CDS Human protein_coding chr8:61777945 chr8:61777946 synonymous SNV . 0 22 hPsi_associated_SNPs_25513 0 0 1 0 0 Cytosol 0.438718587515542 0.438718842134262 0.4236798 0 hPsi_site_19237 iPseU_CNN:0.4236798;iRNA_PseU:0 19238 chr4 41984637 41984637 1 + G A PRAD 41984636 + 41984616 41984656 41 TGACTCAGCAGTGACCTCTGTGCAAATCCTCCAAGAAGAGC TGACTCAGCAGTGACCTCTGTACAAATCCTCCAAGAAGAGC < 41bp 0.443170417465827 0.834959753266897 0.58095616 0.8845562 prediction 0.669919506533793 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984636 chr4:41984637 synonymous SNV . 0 22 hPsi_associated_SNPs_25514 0 0 0 0 0 Nucleus 0.438718097988925 0.438718633364872 0.60720008 0 hPsi_site_19238 iPseU_CNN:0.60720008;iRNA_PseU:0 19239 chr9 21409580 21409580 1 + G A ACC 21409579 + 21409559 21409599 41 GGTGATAGAGTCTCCCCTGATGTACGAGGACTCCATCCTGG GGTGATAGAGTCTCCCCTGATATACGAGGACTCCATCCTGG < 41bp 0.451547668931378 0.834952623407804 0.21851826 0.25489733 prediction 0.669905246815608 Functional Gain - IFNA8 ENSG00000120242 CDS Human protein_coding chr9:21409579 chr9:21409580 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25515 0 0 0 0 0 unknown 0.438718437783081 0.438699416130438 0 0 hPsi_site_19239 iPseU_CNN:0;iRNA_PseU:0 19240 chr22 24125836 24125836 1 + G A SKCM 24125835 + 24125815 24125855 41 GTGGGCACCAGGCATGGGACTGAGCCCATGTCTCCTCAGGG GTGGGCACCAGGCATGGGACTAAGCCCATGTCTCCTCAGGG < 41bp 0.436710039773414 0.834949786668267 0.2205435 0.6281736 prediction 0.669899573336533 Functional Gain - MMP11 ENSG00000267954 CDS Human other chr22:24125835 chr22:24125836 stopgain 0.005 0 22 hPsi_associated_SNPs_25516 0 0 1 1 0 Endoplasmic reticulum 0.438718590628084 0.438718592995126 0.2563472 0 hPsi_site_19240 iPseU_CNN:0.2563472;iRNA_PseU:0 19241 chr7 143087017 143087017 1 + G A LAML 143087016 + 143086996 143087036 41 GAGCCTGGCCGAGATGAGACTGTGCGAGTGGTCGCCCTGGA GAGCCTGGCCGAGATGAGACTATGCGAGTGGTCGCCCTGGA < 41bp 0.565132689167837 0.900080043190745 0.3049514 0.49364606 prediction 0.669894708045817 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143087016 chr7:143087017 nonsynonymous SNV 0.511 3 22 hPsi_associated_SNPs_25517 0 0 1 0 2 Ribosome 0.438501026462925 0.438653457923884 0 0 hPsi_site_19241 iPseU_CNN:0;iRNA_PseU:0 19242 chr3 119306620 119306620 1 + G A LIHC 119306619 + 119306599 119306639 41 TATGTATGGTTTTAAAGGAGTGAGTCCCTCCAACTATGAGA TATGTATGGTTTTAAAGGAGTAAGTCCCTCCAACTATGAGA < 41bp 0.435886253320021 0.834936289156684 0.20827207 0.2774877 prediction 0.669872578313369 Functional Gain - ADPRH ENSG00000144843 CDS Human protein_coding chr3:119306619 chr3:119306620 synonymous SNV . 0 22 hPsi_associated_SNPs_25518 0 0 0 0 0 exosome 0.438718500270324 0.438714184110538 0 0 hPsi_site_19242 iPseU_CNN:0;iRNA_PseU:0 19243 chr6 111588128 111588128 1 + G A SARC 111588127 + 111588107 111588147 41 AAATGGAATGAAATGGATTTTGAAATGATTGAAACGAATGA AAATGGAATGAAATGGATTTTAAAATGATTGAAACGAATGA < 41bp 0.452126944770777 0.834935412436581 0.29464528 0.37235683 prediction 0.669870824873161 Functional Gain - MFSD4B ENSG00000173214 CDS Human protein_coding chr6:111588127 chr6:111588128 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25519 0 0 1 0 0 Nucleus 0.438717428955541 0.438718593943047 0 0 hPsi_site_19243 iPseU_CNN:0;iRNA_PseU:0 19244 chr19 50169991 50169991 1 + G A CESC 50169990 + 50169970 50170010 41 GGGGCTCCGGGAAGACACGCTGAGGGTCCTAGCTGCCTTCC GGGGCTCCGGGAAGACACGCTAAGGGTCCTAGCTGCCTTCC < 41bp 0.539097666644618 0.874021417853987 0.24562138 0.7162034 prediction 0.669847502418738 Functional Gain - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50169990 chr19:50169991 synonymous SNV . 0 22 hPsi_associated_SNPs_25520 0 0 1 0 2 Ribosome 0.438718681585017 0.43871859291369 0.4324068 0 hPsi_site_19244 iPseU_CNN:0.4324068;iRNA_PseU:0 19245 chr10 26508085 26508085 1 + G A LUAD 26508084 + 26508064 26508104 41 GATAGATCAACCAAAGTGATTGATTTCCATTATCCTAATGA GATAGATCAACCAAAGTGATTAATTTCCATTATCCTAATGA < 41bp 0.438867715840501 0.834921864515742 0.19596428 0.2772795 prediction 0.669843729031485 Functional Gain - GAD2 ENSG00000136750 CDS Human protein_coding chr10:26508084 chr10:26508085 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25521 0 0 0 0 0 exosome 0.438729320771131 0.438718593785255 0 0 hPsi_site_19245 iPseU_CNN:0;iRNA_PseU:0 19246 chr4 154315459 154315459 1 + G A HNSC 154315458 + 154315438 154315478 41 GCAAGCCTACAGAAAAGCATTGAGAAAGCTAAAATTGGCCG GCAAGCCTACAGAAAAGCATTAAGAAAGCTAAAATTGGCCG < 41bp 0.550767424342066 0.885685721028543 0.40982935 0.5983068 prediction 0.669836593372955 Functional Gain - MND1 ENSG00000121211 CDS Human protein_coding chr4:154315458 chr4:154315459 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_25522 0 0 1 0 2 chromatin 0.438807103604255 0.443642031363806 0.1966136 0 hPsi_site_19246 iPseU_CNN:0.1966136;iRNA_PseU:0 19247 chr1 228033214 228033214 1 + C A SKCM 228033213 + 228033193 228033233 41 GGAGATGCAGCTCCCGCTGATCCTGGAGCCCTGGTGCCACC GGAGATGCAGCTCCCGCTGATACTGGAGCCCTGGTGCCACC < 41bp 0.471990723657534 0.834915532765059 0.26494414 0.48902857 prediction 0.669831065530118 Functional Gain - PRSS38 ENSG00000185888 CDS Human protein_coding chr1:228033213 chr1:228033214 synonymous SNV . 0 22 hPsi_associated_SNPs_25523 0 0 0 0 2 unknown 0.438718631872027 0.438699089520703 0 0 hPsi_site_19247 iPseU_CNN:0;iRNA_PseU:0 19248 chr14 20444551 20444551 1 + G A BLCA 20444550 + 20444530 20444570 41 CCCTTCAGCAGTTACTCAGTTGACAAAGTCCTTGCTGTATT CCCTTCAGCAGTTACTCAGTTAACAAAGTCCTTGCTGTATT < 41bp 0.464609213388914 0.834915235062034 0.3248473 0.6885998 prediction 0.669830470124069 Functional Gain - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20444550 chr14:20444551 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25524 0 0 0 0 0 unknown 0.438723133159923 0.438733445197476 0.3771996 0 hPsi_site_19248 iPseU_CNN:0.3771996;iRNA_PseU:0 19249 chr14 77796679 77796679 1 + G A UCEC 77796678 + 77796658 77796698 41 CATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAATGCTG CATGGCTGATCTGTGCTTGGTACCTCAGGTGGCAAATGCTG < 41bp 0.418129726207829 0.83491434553465 0.38304126 0.8652284 prediction 0.669828691069301 Functional Gain - GSTZ1 ENSG00000100577 CDS Human protein_coding chr14:77796678 chr14:77796679 synonymous SNV . 0 22 hPsi_associated_SNPs_25525 0 0 0 0 2 Cytosol 0.438684555488211 0.427292690427234 0.7304568 0 hPsi_site_19249 iPseU_CNN:0.7304568;iRNA_PseU:0 19250 chr11 66613527 66613527 1 + G A SKCM 66613526 + 66613506 66613546 41 CCTTCCCCTTTGTGTGCTTTTGGAGCGGGCAGGGGACTCAG CCTTCCCCTTTGTGTGCTTTTAGAGCGGGCAGGGGACTCAG < 41bp 0.43957386922307 0.834912820156502 0.36951536 0.694373 prediction 0.669825640313004 Functional Gain - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66613526 chr11:66613527 synonymous SNV . 0 22 hPsi_associated_SNPs_25526 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995102 0.388746 0 hPsi_site_19250 iPseU_CNN:0.388746;iRNA_PseU:0 19251 chr3 50211254 50211254 1 + C A UCEC 50211253 + 50211233 50211273 41 GGCCACAGGCACCGCCCACTTCTTCAACTTCCTGCTCAACA GGCCACAGGCACCGCCCACTTATTCAACTTCCTGCTCAACA < 41bp 0.53003935909647 0.864951300387719 0.43499115 0.80774534 prediction 0.669823882582496 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50211253 chr3:50211254 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25527 0 0 1 0 1 Endoplasmic reticulum 0.438720055761315 0.438718584871286 0.61549068 0 hPsi_site_19251 iPseU_CNN:0.61549068;iRNA_PseU:0 19252 chr6 132891831 132891831 1 + G A UCEC 132891830 + 132891810 132891850 41 ACTCTTCTCTCTTTCACTTGTGCTTCATCTCCATCGACAGG ACTCTTCTCTCTTTCACTTGTACTTCATCTCCATCGACAGG < 41bp 0.453667572008521 0.834906309822453 0.20744619 0.40734857 prediction 0.669812619644907 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891830 chr6:132891831 nonsynonymous SNV 0.223 3 22 hPsi_associated_SNPs_25528 0 0 0 0 0 unknown 0.438330874782316 0.438702723300585 0 0 hPsi_site_19252 iPseU_CNN:0;iRNA_PseU:0 19253 chr1 203472119 203472119 1 + G A rs72743637 203472118 + 203472098 203472138 41 GGGGCCTTTGCCCCTGAGCCTGCGCTCTGTACACCTGCAGG GGGGCCTTTGCCCCTGAGCCTACGCTCTGTACACCTGCAGG < 41bp 0.424538289548681 0.834904999875261 0.2553838 0.681833 prediction 0.669809999750522 Functional Gain - OPTC ENSG00000188770 CDS Human protein_coding chr1:203472118 chr1:203472119 synonymous SNV . 0 22 hPsi_associated_SNPs_25529 0 0 0 0 2 unknown 0.438718592995102 0.438718592995102 0.363666 0 hPsi_site_19253 iPseU_CNN:0.363666;iRNA_PseU:0 19254 chr12 18891478 18891478 1 + C A CESC 18891477 + 18891457 18891497 41 CCATCAAAGCAAACTTTCTTTCAAATATGACCTGCTTCAAA CCATCAAAGCAAACTTTCTTTAAAATATGACCTGCTTCAAA < 41bp 0.498128648387959 0.83490054489946 0.2816471 0.26619667 prediction 0.669801089798919 Functional Gain - CAPZA3 ENSG00000177938 CDS Human protein_coding chr12:18891477 chr12:18891478 nonsynonymous SNV 0.973 4 22 hPsi_associated_SNPs_25530 0 0 0 0 0 unknown 0.438713860455519 0.438324347245161 0 0 hPsi_site_19254 iPseU_CNN:0;iRNA_PseU:0 19255 chr9 71152393 71152393 1 + G T LUSC 71152394 - 71152374 71152414 41 CCTAGGCCAGACTTTTACCCTCCAGCTTATGAAGAGAGCCT CCTAGGCCAGACTTTTACCCTACAGCTTATGAAGAGAGCCT < 41bp 0.508959452687273 0.843858435970876 0.2593886 0.27115518 prediction 0.669797966567205 Functional Gain - TMEM252 ENSG00000181778 CDS Human protein_coding chr9:71152394 chr9:71152393 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_25531 0 0 0 0 1 exosome 0.438718592995152 0.438718594763415 0 0 hPsi_site_19255 iPseU_CNN:0;iRNA_PseU:0 19256 chr2 102968115 102968115 1 + G A rs114130235 102968114 + 102968094 102968134 41 CAGGAGGTTGCCCTGCACTGTGCCCTCATCCAGAACGACGC CAGGAGGTTGCCCTGCACTGTACCCTCATCCAGAACGACGC < 41bp 0.441343296465406 0.834893481091787 0.28950995 0.78400904 prediction 0.669786962183573 Functional Gain - IL1RL1 ENSG00000115602 CDS Human protein_coding chr2:102968114 chr2:102968115 nonsynonymous SNV 0.839 0 22 hPsi_associated_SNPs_25532 0 0 0 0 0 Endoplasmic reticulum 0.441371149528405 0.439543300284487 0.56801808 0 hPsi_site_19256 iPseU_CNN:0.56801808;iRNA_PseU:0 19257 chr5 176305120 176305120 1 + G A UCEC 176305119 + 176305099 176305139 41 TGCCTGCATGACACCCACGATGCACTCAAGGTATCTCCCGC TGCCTGCATGACACCCACGATACACTCAAGGTATCTCCCGC < 41bp 0.432558345942939 0.834888130692086 0.7843538 0.9758705 prediction 0.669776261384172 Functional Gain - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176305119 chr5:176305120 nonsynonymous SNV 0.173 3 22 hPsi_associated_SNPs_25533 0 0 0 0 1 exosome 0.438743668114487 0.43873403728882 0.3830334 0 hPsi_site_19257 iPseU_CNN:0.3830334;iRNA_PseU:0 19258 chrY 6114379 6114379 1 + C A LUSC 6114378 + 6114358 6114398 41 CAGGGTTCCTGTGGCGTGGGTCGGGCAGCACAGGCCTTGGT CAGGGTTCCTGTGGCGTGGGTAGGGCAGCACAGGCCTTGGT < 41bp 0.501720807646656 0.836608595470044 0.23866984 0.6934976 prediction 0.669775575646777 Functional Gain - TSPY2 ENSG00000168757 CDS Human protein_coding chrY:6114378 chrY:6114379 synonymous SNV . 0 22 hPsi_associated_SNPs_25534 0 0 0 0 0 unknown 0.438720195989187 0.438718545359618 0.3869952 0 hPsi_site_19258 iPseU_CNN:0.3869952;iRNA_PseU:0 19259 chr9 6328954 6328954 1 + C A LUAD 6328953 + 6328933 6328973 41 AGAAGTCGGCCACATTCAGATCTTTTGAAGGTCTGATGGGG AGAAGTCGGCCACATTCAGATATTTTGAAGGTCTGATGGGG < 41bp 0.507390757626033 0.842269018836534 0.29267818 0.35417393 prediction 0.669756522421002 Functional Gain - TPD52L3 ENSG00000170777 CDS Human protein_coding chr9:6328953 chr9:6328954 nonsynonymous SNV 0.011 4 22 hPsi_associated_SNPs_25535 0 0 0 0 1 exosome 0.438718147735548 0.438710733277701 0 0 hPsi_site_19259 iPseU_CNN:0;iRNA_PseU:0 19260 chr1 150443220 150443220 1 + C A GBM 150443219 + 150443199 150443239 41 ATTCTCCTAACTCATCAACTTCTGAAGTCTCTTCAACTTCA ATTCTCCTAACTCATCAACTTATGAAGTCTCTTCAACTTCA < 41bp 0.505680528257559 0.840556741419641 0.3535421 0.531896 prediction 0.669752426324164 Functional Gain - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150443219 chr1:150443220 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25536 0 0 1 0 0 Cytosol 0.43877272207345 0.438741234544538 0.0637920000000001 0 hPsi_site_19260 iPseU_CNN:0.0637920000000001;iRNA_PseU:0 19261 chr20 30584774 30584774 1 + C A COAD 30584773 + 30584753 30584793 41 CTTCTACTCGCTCATCATGGTCTGCGTAGTGGCCTCCAGCT CTTCTACTCGCTCATCATGGTATGCGTAGTGGCCTCCAGCT < 41bp 0.519611221468341 0.854484598830423 0.24692759 0.5761587 prediction 0.669746754724164 Functional Gain - XKR7 ENSG00000260903 CDS Human protein_coding chr20:30584773 chr20:30584774 synonymous SNV . 0 22 hPsi_associated_SNPs_25537 0 0 0 0 0 exosome 0.438718619984346 0.439046530132103 0.1523174 0 hPsi_site_19261 iPseU_CNN:0.1523174;iRNA_PseU:0 19262 chr7 150217085 150217085 1 + C A BRCA 150217084 + 150217064 150217104 41 TGGCTGAGAGTGAGGACCGCTCCCTGAGGATCGTTCTGGTA TGGCTGAGAGTGAGGACCGCTACCTGAGGATCGTTCTGGTA < 41bp 0.486319788210084 0.834872601722027 0.18310556 0.76677537 prediction 0.669745203444054 Functional Gain - GIMAP7 ENSG00000179144 CDS Human protein_coding chr7:150217084 chr7:150217085 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25538 0 0 0 0 1 exosome 0.438718593014128 0.438718693652818 0.53355074 0 hPsi_site_19262 iPseU_CNN:0.53355074;iRNA_PseU:0 19263 chr2 198571234 198571234 1 + G A rs538418790 198571233 + 198571213 198571253 41 CTTAACCGCTATACCGTGGATGGCTTCCGCTACTTTCTCCT CTTAACCGCTATACCGTGGATAGCTTCCGCTACTTTCTCCT < 41bp 0.552429723430115 0.887301336508867 0.45920688 0.7539338 prediction 0.669743226157505 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571233 chr2:198571234 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25539 0 0 1 0 0 Ribosome 0.438718265648737 0.438769173371331 0.5078676 0 hPsi_site_19263 iPseU_CNN:0.5078676;iRNA_PseU:0 19264 chr3 8787591 8787591 1 + G A rs72546670 8787590 + 8787570 8787610 41 AGCGGTGGCAGGGCAGGGGGTGGTGGGCCAGACTGGTCCCC AGCGGTGGCAGGGCAGGGGGTAGTGGGCCAGACTGGTCCCC < 41bp 0.475217196082692 0.834871340642073 0.35304028 0.83057046 prediction 0.669742681284146 Functional Gain - CAV3 ENSG00000182533 UTR3 Human protein_coding chr3:8787590 chr3:8787591 . . 0 22 hPsi_associated_SNPs_25540 0 0 0 0 0 exosome 0.438722487126856 0.43871859299554 0.66114092 0 hPsi_site_19264 iPseU_CNN:0.66114092;iRNA_PseU:0 19265 chr20 30803152 30803152 1 + G A SKCM 30803151 + 30803131 30803171 41 CATCAGCTTGGAGGATTTCATGGAGAAGCTGGCACCCACCC CATCAGCTTGGAGGATTTCATAGAGAAGCTGGCACCCACCC < 41bp 0.430113331383362 0.834862656324603 0.33406627 0.42111754 prediction 0.669725312649205 Functional Gain - POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30803151 chr20:30803152 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25541 0 0 1 0 1 Endoplasmic reticulum 0.4387170746661 0.438718586088586 0 0 hPsi_site_19265 iPseU_CNN:0;iRNA_PseU:0 19266 chr22 21058272 21058272 1 + C A CESC 21058271 + 21058251 21058291 41 CGCAGGTGTGACGGGCAGCTTCGCAGAGTGCAGTACAGCAC CGCAGGTGTGACGGGCAGCTTAGCAGAGTGCAGTACAGCAC < 41bp 0.489548282513757 0.834858444662217 0.5056781 0.45617786 prediction 0.669716889324433 Functional Gain - TMEM191A ENSG00000226287 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:21058271 chr22:21058272 . . 0 22 hPsi_associated_SNPs_25542 0 0 0 0 2 unknown 0.438941977076246 0.438278715236728 0 0 hPsi_site_19266 iPseU_CNN:0;iRNA_PseU:0 19267 chr1 109351454 109351454 1 + G A LGG 109351453 + 109351433 109351473 41 GCTGTTGGATGATATAAAGATGCTGAATAAACCCAAGGATA GCTGTTGGATGATATAAAGATACTGAATAAACCCAAGGATA < 41bp 0.529014766248769 0.863871721577718 0.29796112 0.69649065 prediction 0.669713910657898 Functional Gain - STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109351453 chr1:109351454 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25543 0 0 1 3 1 Nucleus 0.438718594558494 0.438718615472931 0.3929813 0 hPsi_site_19267 iPseU_CNN:0.3929813;iRNA_PseU:0 19268 chr20 2411622 2411622 1 + G A UCEC 2411621 + 2411601 2411641 41 TCATAGAGAGAGTGAAGGACTGTGCGCTGATGGTGGAGGGC TCATAGAGAGAGTGAAGGACTATGCGCTGATGGTGGAGGGC < 41bp 0.42646231227814 0.834846561446135 0.6976051 0.8003663 prediction 0.669693122892269 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2411621 chr20:2411622 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_25544 0 0 0 0 2 exosome 0.439084363197484 0.438727398376781 0.2055224 0 hPsi_site_19268 iPseU_CNN:0.2055224;iRNA_PseU:0 19269 chr13 45953675 45953675 1 + G A rs532117463 45953674 + 45953654 45953694 41 CTTTAGAAACCCTCTCTAGTTGTTTAGACAACTAGGCCACC CTTTAGAAACCCTCTCTAGTTATTTAGACAACTAGGCCACC < 41bp 0.474121462829388 0.834844476677058 0.3153631 0.4170463 prediction 0.669688953354116 Functional Gain - TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45953674 chr13:45953675 . . 0 22 hPsi_associated_SNPs_25545 0 0 0 0 0 unknown 0.43868332383738 0.438634652629574 0 0 hPsi_site_19269 iPseU_CNN:0;iRNA_PseU:0 19270 chrX 70814183 70814183 1 + G A STAD 70814182 + 70814162 70814202 41 ATCTCTTTTATTTTTGCAGTTGCATCCTTAATGTCCAGTCA ATCTCTTTTATTTTTGCAGTTACATCCTTAATGTCCAGTCA < 41bp 0.551757480659697 0.886593433053807 0.26540375 0.717507 prediction 0.66967190478822 Functional Gain - GCNA ENSG00000147174 CDS Human protein_coding chrX:70814182 chrX:70814183 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25546 0 0 0 0 2 unknown 0.439567920299723 0.439678592803848 0.435014 0 hPsi_site_19270 iPseU_CNN:0.435014;iRNA_PseU:0 19271 chr16 1823740 1823740 1 + G A rs201737681 1823739 + 1823719 1823759 41 CGCCGGTGCCGACGTCCTGATGGAGGCCCTGGAGGCCCTGG CGCCGGTGCCGACGTCCTGATAGAGGCCCTGGAGGCCCTGG < 41bp 0.550773699464813 0.885608500765143 0.33611944 0.54170674 prediction 0.669669602600659 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1823739 chr16:1823740 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_25547 0 0 1 0 1 chromatin 0.438718574105255 0.438718594603905 0.0834134799999999 0 hPsi_site_19271 iPseU_CNN:0.0834134799999999;iRNA_PseU:0 19272 chr7 143748183 143748183 1 + C A LUAD 143748182 + 143748162 143748202 41 CGGCCATCTTGAGGATCCAGTCTGGGGAGGGCCGCAGAAAG CGGCCATCTTGAGGATCCAGTATGGGGAGGGCCGCAGAAAG < 41bp 0.498023193215968 0.834832391641719 0.1593579 0.5711093 prediction 0.669664783283439 Functional Gain - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143748182 chr7:143748183 nonsynonymous SNV 0.890 3 22 hPsi_associated_SNPs_25548 0 0 0 0 0 unknown 0.438718593062853 0.438718677487646 0.1422186 0 hPsi_site_19272 iPseU_CNN:0.1422186;iRNA_PseU:0 19273 chr10 89473908 89473908 1 + C A SKCM 89473907 + 89473887 89473927 41 AAGCAGAGACGTAAAAGGCCTCTATAAAAGGGCCAGAGCTG AAGCAGAGACGTAAAAGGCCTATATAAAAGGGCCAGAGCTG < 41bp 0.515070818975745 0.849901738056855 0.33886534 0.56684864 prediction 0.66966183816222 Functional Gain - PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89473907 chr10:89473908 synonymous SNV . 0 22 hPsi_associated_SNPs_25549 0 0 0 1 1 Cytosol 0.438718591637402 0.437979550657284 0.13369728 0 hPsi_site_19273 iPseU_CNN:0.13369728;iRNA_PseU:0 19274 chr2 33045934 33045934 1 + G A rs541406110 33045933 + 33045913 33045953 41 ATGTCCAGGGAATTAGCTGATGACATAACAGCTATGGACAC ATGTCCAGGGAATTAGCTGATAACATAACAGCTATGGACAC < 41bp 0.549923599275865 0.884751510895713 0.30228674 0.47829872 prediction 0.669655823239696 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33045933 chr2:33045934 nonsynonymous SNV 0.235 1 22 hPsi_associated_SNPs_25550 0 0 0 0 1 Nucleus 0.438718723513546 0.43871862124089 0 0 hPsi_site_19274 iPseU_CNN:0;iRNA_PseU:0 19275 chr6 50718983 50718983 1 + C A LUAD 50718982 + 50718962 50719002 41 ATAGATCACCACTGGGATCCTCCAGACCCACTCCAATTCTA ATAGATCACCACTGGGATCCTACAGACCCACTCCAATTCTA < 41bp 0.504504998765789 0.839329203383707 0.23952568 0.64655983 prediction 0.669648409235836 Functional Gain - TFAP2D ENSG00000008197 CDS Human protein_coding chr6:50718982 chr6:50718983 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25551 0 0 0 0 2 unknown 0.43872000251056 0.438702433569618 0.29311966 0 hPsi_site_19275 iPseU_CNN:0.29311966;iRNA_PseU:0 19276 chr4 160275088 160275088 1 + C A CESC 160275087 + 160275067 160275107 41 GGAGGGGTGGAAAGGATGTTTCCATTGAAGCCGAAAGCAGT GGAGGGGTGGAAAGGATGTTTACATTGAAGCCGAAAGCAGT < 41bp 0.509909931083066 0.844731801100663 0.37985075 0.5613673 prediction 0.669643740035193 Functional Gain - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160275087 chr4:160275088 nonsynonymous SNV 0.056 1 22 hPsi_associated_SNPs_25552 0 0 0 0 0 Cytosol 0.43871901498745 0.438718555822549 0.1227346 0 hPsi_site_19276 iPseU_CNN:0.1227346;iRNA_PseU:0 Waist-hip ratio 19277 chr3 42265157 42265157 1 + G A ESCA 42265156 + 42265136 42265176 41 GGTGGGATCTAGCATGCAGATGAAAGCTCCTGTGACTCTCA GGTGGGATCTAGCATGCAGATAAAAGCTCCTGTGACTCTCA < 41bp 0.443925757483782 0.834814568613623 0.25224754 0.32018375 prediction 0.669629137227245 Functional Gain - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42265156 chr3:42265157 nonsynonymous SNV 0.934 0 22 hPsi_associated_SNPs_25553 0 0 0 0 0 Cytosol 0.438717812874465 0.438664836109581 0 0 hPsi_site_19277 iPseU_CNN:0;iRNA_PseU:0 19278 chr21 40763759 40763759 1 + G A UCEC 40763758 + 40763738 40763778 41 AAGTGTCGCTTTCTACGTATTGCAGGTAAGTGTGCTAGAGC AAGTGTCGCTTTCTACGTATTACAGGTAAGTGTGCTAGAGC < 41bp 0.439144815744489 0.83481241566937 0.21651134 0.5727353 prediction 0.669624831338741 Functional Gain - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40763758 chr21:40763759 synonymous SNV . 0 22 hPsi_associated_SNPs_25554 0 0 1 0 1 unknown 0.434098939984493 0.432744000963859 0.1454706 0 hPsi_site_19278 iPseU_CNN:0.1454706;iRNA_PseU:0 19279 chr17 56233012 56233012 1 + G A LUSC 56233011 + 56232991 56233031 41 ACTGGCTCTGATACTTCCACTGCCCTTCTGTGGCCCCAATA ACTGGCTCTGATACTTCCACTACCCTTCTGTGGCCCCAATA < 41bp 0.441207392735373 0.834810977223794 0.2724492 0.54279864 prediction 0.669621954447587 Functional Gain - OR4D1 ENSG00000141194 CDS Human protein_coding chr17:56233011 chr17:56233012 synonymous SNV . 0 22 hPsi_associated_SNPs_25555 0 0 0 0 0 unknown 0.4387185922543 0.438718591908779 0.08559728 0 hPsi_site_19279 iPseU_CNN:0.08559728;iRNA_PseU:0 19280 chr7 45113919 45113919 1 + G A STAD 45113918 + 45113898 45113938 41 CCAGCAGTTTGCAGCACTGCTGCACGAGTACCGCAATGGGG CCAGCAGTTTGCAGCACTGCTACACGAGTACCGCAATGGGG < 41bp 0.562850882488612 0.897661564220525 0.21975231 0.37568167 prediction 0.669621363463826 Functional Gain - CCM2 ENSG00000136280 CDS Human protein_coding chr7:45113918 chr7:45113919 synonymous SNV . 0 22 hPsi_associated_SNPs_25556 0 0 1 0 2 Ribosome 0.438878574480559 0.438922530346853 0 0 hPsi_site_19280 iPseU_CNN:0;iRNA_PseU:0 19281 chr3 183858287 183858287 1 + G A KIRC 183858286 + 183858266 183858306 41 AACCTACACATGTACTCAGCTGTCTGTGCTGACGTCATCCG AACCTACACATGTACTCAGCTATCTGTGCTGACGTCATCCG < 41bp 0.566156559930939 0.900966111321951 0.32034683 0.6960358 prediction 0.669619102782025 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183858286 chr3:183858287 nonsynonymous SNV 0.707 1 22 hPsi_associated_SNPs_25557 0 0 1 0 1 Ribosome 0.437977850711058 0.438648912613449 0.3920716 0 hPsi_site_19281 iPseU_CNN:0.3920716;iRNA_PseU:0 19282 chr14 50206889 50206889 1 + G A KIRC 50206888 + 50206868 50206908 41 GGGAGCAAAGATGACTTACTTGCCTTGGATACAGTAAGAAA GGGAGCAAAGATGACTTACTTACCTTGGATACAGTAAGAAA < 41bp 0.456302290106693 0.83480648194174 0.21092382 0.38087434 prediction 0.66961296388348 Functional Gain - KLHDC1 ENSG00000197776 CDS Human protein_coding chr14:50206888 chr14:50206889 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_25558 0 0 0 0 2 exosome 0.439073526985856 0.43891267201643 0 0 hPsi_site_19282 iPseU_CNN:0;iRNA_PseU:0 19283 chr12 53671305 53671305 1 + G A HNSC 53671304 + 53671284 53671324 41 CCTGGTAACTTGGAGGAATTTGAAGTCAATGACCTGAACTA CCTGGTAACTTGGAGGAATTTAAAGTCAATGACCTGAACTA < 41bp 0.4261690257166 0.834801814133089 0.3308725 0.55168694 prediction 0.669603628266178 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671304 chr12:53671305 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25559 0 0 1 0 1 Nucleus 0.438718593115097 0.438712134843998 0.10337388 0 hPsi_site_19283 iPseU_CNN:0.10337388;iRNA_PseU:0 19284 chr1 12040264 12040264 1 + G A rs534796178 12040263 + 12040243 12040283 41 GCAGTGGGAGTCCGAGCCTCTGCGTCGTCCGCTTGGGACGC GCAGTGGGAGTCCGAGCCTCTACGTCGTCCGCTTGGGACGC < 41bp 0.459712561423019 0.834799029311918 0.24023876 0.33073777 prediction 0.669598058623836 Functional Gain - MFN2 ENSG00000116688 UTR5 Human protein_coding chr1:12040263 chr1:12040264 . . 0 22 hPsi_associated_SNPs_25560 0 0 1 0 0 Ribosome 0.438965429222139 0.438721375788267 0 0 hPsi_site_19284 iPseU_CNN:0;iRNA_PseU:0 19285 chr16 89696859 89696859 1 + G A HNSC 89696858 + 89696838 89696878 41 TGTGGCCCCTTGTGGCCGTCTGCACTGCAGACTTCTTTCGG TGTGGCCCCTTGTGGCCGTCTACACTGCAGACTTCTTTCGG < 41bp 0.428796835274273 0.834798117081015 0.2564405 0.33079484 prediction 0.669596234162031 Functional Gain - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89696858 chr16:89696859 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_25561 0 0 1 0 1 Ribosome 0.438626417868398 0.438569982824423 0 0 hPsi_site_19285 iPseU_CNN:0;iRNA_PseU:0 19286 chr12 121438953 121438953 1 + C A HNSC 121438952 + 121438932 121438972 41 GCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCACCC GCCATCCAACCACAGCGTCATAGAGACCTTCATCTCCACCC < 41bp 0.507469972912201 0.842265225119199 0.31249124 0.39222494 prediction 0.669590504413996 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121438952 chr12:121438953 synonymous SNV . 0 22 hPsi_associated_SNPs_25562 0 0 0 0 0 cytosol 0.438560825668459 0.438113478949903 0 0 hPsi_site_19286 iPseU_CNN:0;iRNA_PseU:0 19287 chr1 171162507 171162507 1 + C A HNSC 171162506 + 171162486 171162526 41 GATGGCCGAGCAAGTATCTATCAATCTGTCGTTACCAACAC GATGGCCGAGCAAGTATCTATAAATCTGTCGTTACCAACAC < 41bp 0.4856559872528 0.834791266269388 0.50613886 0.4929426 prediction 0.669582532538776 Functional Gain - FMO2 ENSG00000094963 CDS Human protein_coding chr1:171162506 chr1:171162507 nonsynonymous SNV 0.887 0 22 hPsi_associated_SNPs_25563 0 0 0 0 1 exosome 0.438722753059774 0.438732476556101 0 0 hPsi_site_19287 iPseU_CNN:0;iRNA_PseU:0 19288 chr3 187088724 187088724 1 + G A CESC 187088723 + 187088703 187088743 41 AAGTGCTCCTGGTCCCAATATGAGATGCCTGAGTTCTCCTC AAGTGCTCCTGGTCCCAATATAAGATGCCTGAGTTCTCCTC < 41bp 0.430449910190554 0.83478901946582 0.4094559 0.44095472 prediction 0.669578038931641 Functional Gain - RTP4 ENSG00000136514 CDS Human protein_coding chr3:187088723 chr3:187088724 nonsynonymous SNV 0.325 4 22 hPsi_associated_SNPs_25564 0 0 0 0 0 exosome 0.438718593003482 0.438718592986979 0 0 hPsi_site_19288 iPseU_CNN:0;iRNA_PseU:0 19289 chrX 54841756 54841756 1 + G A BLCA 54841755 + 54841735 54841775 41 GCGGATTTGAAGGCTGCAGCTGAGGCTGCAGCTGAAGCCAA GCGGATTTGAAGGCTGCAGCTAAGGCTGCAGCTGAAGCCAA < 41bp 0.429644740717637 0.834784652450205 0.2527092 0.2972893 prediction 0.66956930490041 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841755 chrX:54841756 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_25565 0 0 1 0 1 chromatin 0.438718605719097 0.438718593054934 0 0 hPsi_site_19289 iPseU_CNN:0;iRNA_PseU:0 19290 chr8 121293246 121293246 1 + G A STAD 121293245 + 121293225 121293265 41 ATGGAGCCTGGTACCTTCAATGTGTTTCCATGTTACCAACT ATGGAGCCTGGTACCTTCAATATGTTTCCATGTTACCAACT < 41bp 0.445310199856941 0.834783650158199 0.5344869 0.6686342 prediction 0.669567300316397 Functional Gain - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121293245 chr8:121293246 nonsynonymous SNV 0.339 1 22 hPsi_associated_SNPs_25566 0 0 0 0 2 Ribosome 0.438718621976647 0.438718593957259 0.2682946 0 hPsi_site_19290 iPseU_CNN:0.2682946;iRNA_PseU:0 19291 chr12 67706441 67706441 1 + C A CESC 67706440 + 67706420 67706460 41 AACAAGATGAATTAAAGCGATCTGCCATGAGAGCAGTAGCA AACAAGATGAATTAAAGCGATATGCCATGAGAGCAGTAGCA < 41bp 0.499652352282148 0.834774719149987 0.20352751 0.2611558 prediction 0.669549438299974 Functional Gain - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67706440 chr12:67706441 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_25567 0 0 1 0 1 Nucleus 0.439288633698704 0.438714953557067 0 0 hPsi_site_19291 iPseU_CNN:0;iRNA_PseU:0 19292 chr1 16353081 16353081 1 + G A CESC 16353080 + 16353060 16353100 41 CGCTGCCTACCTGGGCCGTGTGCGCACCACGACCATCGGGG CGCTGCCTACCTGGGCCGTGTACGCACCACGACCATCGGGG < 41bp 0.564604030670346 0.899370538256292 0.37108368 0.85025537 prediction 0.669533015171893 Functional Gain - CLCNKA ENSG00000186510 CDS Human protein_coding chr1:16353080 chr1:16353081 synonymous SNV . 0 22 hPsi_associated_SNPs_25568 0 0 0 0 2 Endoplasmic reticulum 0.438405083119907 0.43885714550897 0.70051074 0 hPsi_site_19292 iPseU_CNN:0.70051074;iRNA_PseU:0 19293 chr1 53676925 53676925 1 + G A BLCA 53676924 + 53676904 53676944 41 CCCTCCAGGCACAGTGCTGGTGAGCTTCAGCAGATGATGGT CCCTCCAGGCACAGTGCTGGTAAGCTTCAGCAGATGATGGT < 41bp 0.426525949600504 0.834766238704695 0.30073532 0.68639684 prediction 0.66953247740939 Functional Gain - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53676924 chr1:53676925 nonsynonymous SNV 0.826 3 22 hPsi_associated_SNPs_25569 0 0 0 0 1 Ribosome 0.438686673484231 0.43849413961329 0.37279368 0 hPsi_site_19293 iPseU_CNN:0.37279368;iRNA_PseU:0 19294 chr15 43668391 43668391 1 + C A COAD 43668390 + 43668370 43668410 41 CTATATTCGCTTCACTGAGTTCATTGAACAGTACACGGGCC CTATATTCGCTTCACTGAGTTAATTGAACAGTACACGGGCC < 41bp 0.467339503101147 0.834765264818755 0.2850489 0.68175703 prediction 0.66953052963751 Functional Gain - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43668390 chr15:43668391 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25570 0 0 1 0 2 Ribosome 0.438718620709084 0.438718778546977 0.36351406 0 hPsi_site_19294 iPseU_CNN:0.36351406;iRNA_PseU:0 19295 chr11 56756664 56756664 1 + G A rs2853083 56756663 + 56756643 56756683 41 CACAGAAGAAAAGAATTTGATGTTATTTCAGGGCTGTGTGA CACAGAAGAAAAGAATTTGATATTATTTCAGGGCTGTGTGA < 41bp 0.47755934055192 0.834759979175913 0.2310788 0.2797413 prediction 0.669519958351827 Functional Gain - OR5AK2 ENSG00000181273 CDS Human protein_coding chr11:56756663 chr11:56756664 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25571 0 0 0 0 0 unknown 0.438712329357579 0.438715740366359 0 0 hPsi_site_19295 iPseU_CNN:0;iRNA_PseU:0 19296 chr8 146228691 146228691 1 + C A UCEC 146228690 + 146228670 146228710 41 CTAGCACTTCCCACCTGTAGTCTTTTGACCTCATCGCCCCC CTAGCACTTCCCACCTGTAGTATTTTGACCTCATCGCCCCC < 41bp 0.506650220001144 0.841405656151628 0.5509083 0.67220306 prediction 0.669510872300968 Functional Gain - ZNF252P-AS1 ENSG00000255559 ncRNA_exonic Human antisense chr8:146228690 chr8:146228691 . . 0 22 hPsi_associated_SNPs_25572 0 0 0 0 0 unknown 0.438861487661842 0.438718810960356 0.24258952 0 hPsi_site_19296 iPseU_CNN:0.24258952;iRNA_PseU:0 19297 chr21 43987123 43987123 1 + C A THCA 43987122 + 43987102 43987142 41 GCTGCTCAGCGGAGCCCTGGTCAGTGGGCCCTACACACTCA GCTGCTCAGCGGAGCCCTGGTAAGTGGGCCCTACACACTCA < 41bp 0.533045229722369 0.867800035307483 0.2582578 0.7400442 prediction 0.669509611170228 Functional Gain - SLC37A1 ENSG00000160190 CDS Human protein_coding chr21:43987122 chr21:43987123 synonymous SNV . 0 22 hPsi_associated_SNPs_25573 0 0 0 0 2 Nucleus 0.438718593010444 0.438719105785841 0.4800884 0 hPsi_site_19297 iPseU_CNN:0.4800884;iRNA_PseU:0 19298 chr18 74607198 74607198 1 + C A LGG 74607197 + 74607177 74607217 41 CCAGTACTGCATGAAGAGCTTCTCCACCTCTGGCAGCCTCA CCAGTACTGCATGAAGAGCTTATCCACCTCTGGCAGCCTCA < 41bp 0.509826119968739 0.844575736231373 0.5275604 0.66875106 prediction 0.669499232525269 Functional Gain - ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74607197 chr18:74607198 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_25574 0 0 1 0 1 Cytosol 0.438718094386754 0.438707978175921 0.28238132 0 hPsi_site_19298 iPseU_CNN:0.28238132;iRNA_PseU:0 19299 chr1 228238448 228238448 1 + C A UCEC 228238447 + 228238427 228238467 41 TGCAGAAGGCACGGCCGCCATCTGTGGCTGCAGCAGCCGCC TGCAGAAGGCACGGCCGCCATATGTGGCTGCAGCAGCCGCC < 41bp 0.526466708402261 0.861216298822379 0.39324814 0.3574189 prediction 0.669499180840236 Functional Gain - WNT3A ENSG00000154342 CDS Human protein_coding chr1:228238447 chr1:228238448 synonymous SNV . 0 22 hPsi_associated_SNPs_25575 0 0 0 0 1 exosome 0.438748239766501 0.438709913861958 0 0 hPsi_site_19299 iPseU_CNN:0;iRNA_PseU:0 19300 chr17 3101697 3101697 1 + G A SKCM 3101696 + 3101676 3101716 41 TAGTCTGAGAAATTGGGATATGAAGGCAGCCCTACAGAAAC TAGTCTGAGAAATTGGGATATAAAGGCAGCCCTACAGAAAC < 41bp 0.467931259399504 0.834748661567597 0.27940506 0.3705725 prediction 0.669497323135194 Functional Gain - OR1A2 ENSG00000172150 CDS Human protein_coding chr17:3101696 chr17:3101697 nonsynonymous SNV 0.035 1 22 hPsi_associated_SNPs_25576 0 0 0 0 0 exosome 0.438718661920236 0.438724322764788 0 0 hPsi_site_19300 iPseU_CNN:0;iRNA_PseU:0 19301 chr1 247769005 247769005 1 + G A STAD 247769004 + 247768984 247769024 41 TTCTTCTACCTCCTGACCCTTGTGGGAAACTTCACCATAAT TTCTTCTACCTCCTGACCCTTATGGGAAACTTCACCATAAT < 41bp 0.538655636501843 0.873402693276559 0.32280275 0.41467 prediction 0.669494113549432 Functional Gain - OR2G3 ENSG00000177476 CDS Human protein_coding chr1:247769004 chr1:247769005 nonsynonymous SNV 0.796 0 22 hPsi_associated_SNPs_25577 0 0 0 0 0 unknown 0.43871837275051 0.438718591959147 0 0 hPsi_site_19301 iPseU_CNN:0;iRNA_PseU:0 19302 chrX 118151867 118151867 1 + G A rs7879672 118151866 + 118151846 118151886 41 TAAGATGCTTCTTGACATGCTGCATAACTACATAAACAGCA TAAGATGCTTCTTGACATGCTACATAACTACATAAACAGCA < 41bp 0.46594714496251 0.834746866390672 0.19277805 0.30487826 prediction 0.669493732781343 Functional Gain - LONRF3 ENSG00000175556 UTR3 Human protein_coding chrX:118151866 chrX:118151867 . . 0 22 hPsi_associated_SNPs_25578 0 0 1 3 0 chromatin 0.438497849110871 0.438926780048066 0 0 hPsi_site_19302 iPseU_CNN:0;iRNA_PseU:0 19303 chr22 44603749 44603749 1 + G A rs188043741 44603748 + 44603728 44603768 41 GTTCCACGTGAGCACTCAGATGCACCCCTCTTCATGGATAC GTTCCACGTGAGCACTCAGATACACCCCTCTTCATGGATAC < 41bp 0.505773282858849 0.840518841979357 0.552142 0.8638495 prediction 0.669491118241016 Functional Gain - PARVG ENSG00000138964 UTR3 Human protein_coding chr22:44603748 chr22:44603749 . . 0 22 hPsi_associated_SNPs_25579 0 0 0 0 0 exosome 0.43873443109552 0.438706283039045 0.623415 0 hPsi_site_19303 iPseU_CNN:0.623415;iRNA_PseU:0 19304 chr18 2743877 2743877 1 + C A COAD 2743876 + 2743856 2743896 41 TTATTCGAGTGCAACTAATTTCTGGACCTCCTGCTAAACTT TTATTCGAGTGCAACTAATTTATGGACCTCCTGCTAAACTT < 41bp 0.507510106453758 0.842248412344176 0.55668 0.4722681 prediction 0.669476611780837 Functional Gain - SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2743876 chr18:2743877 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25580 0 0 1 0 1 Nucleus 0.438718593217869 0.438718593845728 0 0 hPsi_site_19304 iPseU_CNN:0;iRNA_PseU:0 19305 chr1 22987870 22987870 1 + G A SKCM 22987869 + 22987849 22987889 41 GTTCCTGCTCTTTCCAGATATGGAGGCCTGACCTGTGGGCT GTTCCTGCTCTTTCCAGATATAGAGGCCTGACCTGTGGGCT < 41bp 0.450744077143694 0.834735156409945 0.27605182 0.353657 prediction 0.669470312819891 Functional Gain - C1QB ENSG00000173369 CDS Human protein_coding chr1:22987869 chr1:22987870 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_25581 0 0 0 0 0 exosome 0.438717278630189 0.438774483046354 0 0 hPsi_site_19305 iPseU_CNN:0;iRNA_PseU:0 19306 chr11 46403649 46403649 1 + G A rs20542 46403648 + 46403628 46403668 41 CCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTCCGCGG CCTCCTCACCCTCCTCGCCCTACTGGCGCTCACCTCCGCGG < 41bp 0.441092330227786 0.834730546832115 0.24991208 0.73823935 prediction 0.669461093664229 Functional Gain - MDK ENSG00000110492 CDS Human protein_coding chr11:46403648 chr11:46403649 synonymous SNV . 0 22 hPsi_associated_SNPs_25582 0 0 1 0 2 Ribosome 0.438699856579723 0.438717738045504 0.4764787 0 hPsi_site_19306 iPseU_CNN:0.4764787;iRNA_PseU:0 19307 chr14 20692426 20692426 1 + C A UCEC 20692425 + 20692405 20692445 41 TCTTATCTCCCAACTTCCCTTCTGTGGGCCCAACATCATTG TCTTATCTCCCAACTTCCCTTATGTGGGCCCAACATCATTG < 41bp 0.51370620832917 0.848431253653557 0.27966404 0.5029535 prediction 0.669450090648775 Functional Gain - OR11H6 ENSG00000176219 CDS Human protein_coding chr14:20692425 chr14:20692426 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25583 0 0 0 0 0 unknown 0.438718593109467 0.438718592858606 0.00590700000000011 0 hPsi_site_19307 iPseU_CNN:0.00590700000000011;iRNA_PseU:0 19308 chrX 111698834 111698834 1 + G A STAD 111698833 + 111698813 111698853 41 CTGGTCACTTCACAAGAGATTGCCTTGCCAAACGTTCTCGA CTGGTCACTTCACAAGAGATTACCTTGCCAAACGTTCTCGA < 41bp 0.450836576694576 0.834721732118761 0.3950053 0.6321317 prediction 0.669443464237522 Functional Gain - RTL4 ENSG00000187823 CDS Human protein_coding chrX:111698833 chrX:111698834 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25584 0 0 0 0 0 unknown 0.437981280726787 0.439266764134948 0.2642634 0 hPsi_site_19308 iPseU_CNN:0.2642634;iRNA_PseU:0 19309 chr17 18761389 18761389 1 + G A rs565572248 18761388 + 18761368 18761408 41 GCCCACAGCCCCCAGCTAGGTGCCTCCGCTGTCCGGGCTCT GCCCACAGCCCCCAGCTAGGTACCTCCGCTGTCCGGGCTCT < 41bp 0.47262769940117 0.834716936826834 0.25384116 0.76122916 prediction 0.669433873653668 Functional Gain - PRPSAP2 ENSG00000141127 intronic Human protein_coding chr17:18761388 chr17:18761389 . . 0 22 hPsi_associated_SNPs_25585 0 0 0 0 0 Ribosome 0.438718592995102 0.438718592995102 0.52245832 0 hPsi_site_19309 iPseU_CNN:0.52245832;iRNA_PseU:0 19310 chr12 64814173 64814173 1 + C A LIHC 64814172 + 64814152 64814192 41 GGTCATATGTCAATAGAAGTTCTACGGGAAGAAGCATGTGA GGTCATATGTCAATAGAAGTTATACGGGAAGAAGCATGTGA < 41bp 0.509772039187468 0.844488867106663 0.27553618 0.3406345 prediction 0.669433655838388 Functional Gain - XPOT ENSG00000184575 CDS Human protein_coding chr12:64814172 chr12:64814173 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25586 0 0 0 0 1 Ribosome 0.438745113233034 0.438671686304689 0 0 hPsi_site_19310 iPseU_CNN:0;iRNA_PseU:0 19311 chrX 53106253 53106253 1 + G A BLCA 53106252 + 53106232 53106272 41 CATCTGCATGGCCTGGACCCTGTCTGTGGCCATGGCCTTCC CATCTGCATGGCCTGGACCCTATCTGTGGCCATGGCCTTCC < 41bp 0.427343575721158 0.834711798586209 0.22543815 0.31428197 prediction 0.669423597172419 Functional Gain - GPR173 ENSG00000184194 CDS Human protein_coding chrX:53106252 chrX:53106253 synonymous SNV . 0 22 hPsi_associated_SNPs_25587 0 0 0 0 0 exosome 0.438718254069005 0.438717840956719 0 0 hPsi_site_19311 iPseU_CNN:0;iRNA_PseU:0 19312 chr2 101607275 101607275 1 + G A UCEC 101607274 + 101607254 101607294 41 CCAGCCCATCCAGCCCATGATGCCCGGGTCCTGTGACGCAA CCAGCCCATCCAGCCCATGATACCCGGGTCCTGTGACGCAA < 41bp 0.435131219100246 0.834711094546851 0.26292777 0.3102898 prediction 0.669422189093703 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101607274 chr2:101607275 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25588 0 0 1 0 2 cytosol 0.43871851714237 0.43871684584185 0 0 hPsi_site_19312 iPseU_CNN:0;iRNA_PseU:0 19313 chrX 69424215 69424215 1 + C A UCEC 69424214 + 69424194 69424234 41 AGTTTTCAATCAGGAGACCTTCCCTGAGGGCACGTGGTTAA AGTTTTCAATCAGGAGACCTTACCTGAGGGCACGTGGTTAA < 41bp 0.472765636405684 0.834711007331086 0.2803948 0.38853648 prediction 0.669422014662173 Functional Gain - DGAT2L6 ENSG00000184210 CDS Human protein_coding chrX:69424214 chrX:69424215 nonsynonymous SNV 0.370 4 22 hPsi_associated_SNPs_25589 0 0 0 0 1 exosome 0.438097001569281 0.438692002531917 0 0 hPsi_site_19313 iPseU_CNN:0;iRNA_PseU:0 19314 chr4 88903747 88903747 1 + C A UCEC 88903746 + 88903726 88903766 41 CCCAGGACCTGAACGCGCCTTCTGATTGGGACAGCCGTGGG CCCAGGACCTGAACGCGCCTTATGATTGGGACAGCCGTGGG < 41bp 0.47339981228107 0.834709420890384 0.19258815 0.3477137 prediction 0.669418841780768 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903746 chr4:88903747 nonsynonymous SNV 0.541 3 22 hPsi_associated_SNPs_25590 0 0 1 0 0 insoluble cytoplasm 0.438755919673213 0.438443779778832 0 0 hPsi_site_19314 iPseU_CNN:0;iRNA_PseU:0 19315 chr19 50149824 50149824 1 + G A TGCT 50149823 + 50149803 50149843 41 CAGCTTCCTCGCAGGGCTGGTGAGTGTCCTGGATCCCCCGG CAGCTTCCTCGCAGGGCTGGTAAGTGTCCTGGATCCCCCGG < 41bp 0.429163727344182 0.834708359686335 0.13730076 0.5529946 prediction 0.66941671937267 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50149823 chr19:50149824 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_25591 0 0 1 0 2 Cytosol 0.438718591964841 0.438718606383337 0.1059892 0 hPsi_site_19315 iPseU_CNN:0.1059892;iRNA_PseU:0 19316 chr2 121685024 121685024 1 + C A UCEC 121685023 + 121685003 121685043 41 GGTACCATTACGAGCCTCATTCTGTCCACGGTGTGCACGGG GGTACCATTACGAGCCTCATTATGTCCACGGTGTGCACGGG < 41bp 0.500942799965326 0.835644789201583 0.50737673 0.4887596 prediction 0.669403978472515 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121685023 chr2:121685024 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25592 0 0 0 1 1 Endoplasmic reticulum 0.438718592995071 0.438718588251248 0 0 hPsi_site_19316 iPseU_CNN:0;iRNA_PseU:0 19317 chr6 88109304 88109304 1 + G A rs1051550 88109303 + 88109283 88109323 41 CATACAAGGGTGCTTGGGGGTGGGTTGGGGATCCCAAGGCA CATACAAGGGTGCTTGGGGGTAGGTTGGGGATCCCAAGGCA < 41bp 0.518683029241132 0.853383285752674 0.21632835 0.34820688 prediction 0.669400513023084 Functional Gain - LINC01590 ENSG00000203871;ENSG00000226524 UTR3 Human other chr6:88109303 chr6:88109304 . . 0 22 hPsi_associated_SNPs_25593 0 0 0 0 0 unknown 0.438718592995006 0.438718548630351 0 0 hPsi_site_19317 iPseU_CNN:0;iRNA_PseU:0 19318 chr2 27275988 27275988 1 + C A READ 27275987 + 27275967 27276007 41 CTCTTCCCCTGACTATGAATTCAACGTGTGGACCCGACCAG CTCTTCCCCTGACTATGAATTAAACGTGTGGACCCGACCAG < 41bp 0.523578287164508 0.858277831960451 0.26391584 0.34112048 prediction 0.669399089591885 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27275987 chr2:27275988 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_25594 0 0 1 0 1 Cytosol 0.438509272083979 0.438718965428818 0 0 hPsi_site_19318 iPseU_CNN:0;iRNA_PseU:0 19319 chr4 164272323 164272323 1 + C A STAD 164272322 + 164272302 164272342 41 ACAGCATGTGTGTTACCTGCTCCAGAAAGACCTTCTCAAGA ACAGCATGTGTGTTACCTGCTACAGAAAGACCTTCTCAAGA < 41bp 0.4902971258619 0.8346986624055 0.30153948 0.52278984 prediction 0.669397324810999 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272322 chr4:164272323 nonsynonymous SNV 0.821 0 22 hPsi_associated_SNPs_25595 0 0 0 0 0 unknown 0.438658139382402 0.434320166046881 0.0455796799999999 0 hPsi_site_19319 iPseU_CNN:0.0455796799999999;iRNA_PseU:0 19320 chr1 1269288 1269288 1 + G A rs147921760 1269287 + 1269267 1269307 41 AGTCAGAACTGCCTCTGAGCTGGGCAGACCGGCTGAGTGGC AGTCAGAACTGCCTCTGAGCTAGGCAGACCGGCTGAGTGGC < 41bp 0.443956172498559 0.834692135731629 0.29360098 0.33585507 prediction 0.669384271463257 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269287 chr1:1269288 stopgain 0.573 0 22 hPsi_associated_SNPs_25596 0 0 0 0 0 chromatin 0.438723812055483 0.438718595334954 0 0 hPsi_site_19320 iPseU_CNN:0;iRNA_PseU:0 19321 chr11 65744142 65744142 1 + G A rs200608651 65744141 + 65744121 65744161 41 CCCCAGGACTTTGAACGGGATGAGGAGCGCTCAGCCAACGG CCCCAGGACTTTGAACGGGATAAGGAGCGCTCAGCCAACGG < 41bp 0.421991293288578 0.834688917874568 0.31685573 0.63682747 prediction 0.669377835749136 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65744141 chr11:65744142 nonsynonymous SNV 0.297 0 22 hPsi_associated_SNPs_25597 0 0 1 0 2 Cytosol 0.438718592947073 0.438718592559026 0.27365494 0 hPsi_site_19321 iPseU_CNN:0.27365494;iRNA_PseU:0 19322 chr3 126676271 126676271 1 + G A rs75184196 126676270 + 126676250 126676290 41 CTTCTGCAGGCCCCGCAGGGTGGAGCCCGTCTGCTCAGGGT CTTCTGCAGGCCCCGCAGGGTAGAGCCCGTCTGCTCAGGGT < 41bp 0.549745910761159 0.884428286962381 0.3189246 0.738162 prediction 0.669364752402444 Functional Gain - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126676270 chr3:126676271 synonymous SNV . 0 22 hPsi_associated_SNPs_25598 0 0 0 0 1 Ribosome 0.438716599303461 0.438718548231491 0.476324 0 hPsi_site_19322 iPseU_CNN:0.476324;iRNA_PseU:0 19323 chr4 22820480 22820480 1 + C A SKCM 22820479 + 22820459 22820499 41 AGACCCAGCTAGACCCCGAGTCCCTTACACATCGGCCAAGG AGACCCAGCTAGACCCCGAGTACCTTACACATCGGCCAAGG < 41bp 0.48878340083636 0.834679401434046 0.17938793 0.65823054 prediction 0.669358802868092 Functional Gain - GBA3 ENSG00000249948 CDS Human polymorphic_pseudogene chr4:22820479 chr4:22820480 unknown . 0 22 hPsi_associated_SNPs_25599 0 0 0 0 0 unknown 0.438718592995158 0.438718614659733 0.31646108 0 hPsi_site_19323 iPseU_CNN:0.31646108;iRNA_PseU:0 19324 chr4 170611744 170611744 1 + C A CESC 170611743 + 170611723 170611763 41 TGGGCCTTGAGTTTTGCCTTTCTTGCAGTTTCCCTGGTAAA TGGGCCTTGAGTTTTGCCTTTATTGCAGTTTCCCTGGTAAA < 41bp 0.52597009614521 0.86064900050144 0.27665052 0.44775474 prediction 0.669357808712459 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170611743 chr4:170611744 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25600 0 0 1 0 1 Ribosome 0.438675506229661 0.438672162455493 0 0 hPsi_site_19324 iPseU_CNN:0;iRNA_PseU:0 19325 chr11 72533982 72533982 1 + G A rs538460355 72533981 + 72533961 72534001 41 AGCCCCTGGAGAAGGAAGCTTGTGAGAAGTGGAAGAGGCCC AGCCCCTGGAGAAGGAAGCTTATGAGAAGTGGAAGAGGCCC < 41bp 0.552579901118007 0.887257019235356 0.33665323 0.32156628 prediction 0.669354236234698 Functional Gain - ATG16L2 ENSG00000168010 CDS Human protein_coding chr11:72533981 chr11:72533982 nonsynonymous SNV 0.914 0 22 hPsi_associated_SNPs_25601 0 0 1 0 2 Cytosol 0.438718701523349 0.438720266893099 0 0 hPsi_site_19325 iPseU_CNN:0;iRNA_PseU:0 19326 chr9 125273578 125273578 1 + G A rs113455966 125273577 + 125273557 125273597 41 CACCCTTCTCCTGACCCGGCTGTCTTTCTGTGCTGCGAACA CACCCTTCTCCTGACCCGGCTATCTTTCTGTGCTGCGAACA < 41bp 0.437533480036159 0.834676666158517 0.31460524 0.60617334 prediction 0.669353332317034 Functional Gain - OR1J2 ENSG00000197233 CDS Human protein_coding chr9:125273577 chr9:125273578 synonymous SNV . 0 22 hPsi_associated_SNPs_25602 0 0 0 0 0 exosome 0.438718591587557 0.4387185922582 0.21234668 0 hPsi_site_19326 iPseU_CNN:0.21234668;iRNA_PseU:0 19327 chr10 72294242 72294242 1 + C A LUAD 72294241 + 72294221 72294261 41 TTCCAGGTGATCCAGAGCTTTCTCCGCATGGTGCCCCAGGG TTCCAGGTGATCCAGAGCTTTATCCGCATGGTGCCCCAGGG < 41bp 0.466729673807509 0.834675305305571 0.35324994 0.43266636 prediction 0.669350610611143 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72294241 chr10:72294242 nonsynonymous SNV 0.861 0 22 hPsi_associated_SNPs_25603 0 0 0 0 2 Ribosome 0.438718592995069 0.438717954189957 0 0 hPsi_site_19327 iPseU_CNN:0;iRNA_PseU:0 19328 chr6 90605155 90605155 1 + C A LIHC 90605154 + 90605134 90605174 41 CCAATGGGAAAAAGGACTGGTCTGAGAAGGATCAGCATAGC CCAATGGGAAAAAGGACTGGTATGAGAAGGATCAGCATAGC < 41bp 0.516596347267371 0.851269087487479 0.27835214 0.7621245 prediction 0.669345480440217 Functional Gain - GJA10 ENSG00000135355 CDS Human protein_coding chr6:90605154 chr6:90605155 nonsynonymous SNV 0.210 2 22 hPsi_associated_SNPs_25604 0 0 0 0 0 unknown 0.438718592975355 0.438853491185555 0.524249 0 hPsi_site_19328 iPseU_CNN:0.524249;iRNA_PseU:0 19329 chr5 154394064 154394064 1 + C A UCEC 154394063 + 154394043 154394083 41 GTCGTCCCGATCTCATGCCATCTTTACAATCTCCATAGAGC GTCGTCCCGATCTCATGCCATATTTACAATCTCCATAGAGC < 41bp 0.514853237195707 0.849522845868962 0.27697504 0.3617763 prediction 0.66933921734651 Functional Gain - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154394063 chr5:154394064 synonymous SNV . 0 22 hPsi_associated_SNPs_25605 0 0 0 0 0 exosome 0.438651438281302 0.438862576098715 0 0 hPsi_site_19329 iPseU_CNN:0;iRNA_PseU:0 19330 chr9 36170525 36170525 1 + G A SKCM 36170524 + 36170504 36170544 41 CACTGAGCAGATTTCAGGGCTGAAGACAGCCTGGCGGTATG CACTGAGCAGATTTCAGGGCTAAAGACAGCCTGGCGGTATG < 41bp 0.546857534758089 0.881520540295428 0.32496804 0.5498007 prediction 0.669326011074678 Functional Gain - CCIN ENSG00000185972 CDS Human protein_coding chr9:36170524 chr9:36170525 synonymous SNV . 0 22 hPsi_associated_SNPs_25606 0 0 0 0 0 exosome 0.438740435816307 0.438718557761905 0.0996014000000001 0 hPsi_site_19330 iPseU_CNN:0.0996014000000001;iRNA_PseU:0 19331 chr19 10943800 10943800 1 + C T STAD 10943801 - 10943781 10943821 41 CGAGGCACGTGACCGCAACCTGCAAGAGGGCAACTTGGAGC CGAGGCACGTGACCGCAACCTACAAGAGGGCAACTTGGAGC < 41bp 0.552585993612013 0.88724227721608 0.3915215 0.8346478 prediction 0.669312567208133 Functional Gain - TMED1 ENSG00000079805;ENSG00000099203 CDS Human other chr19:10943801 chr19:10943800 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_25607 0 0 1 0 1 Ribosome 0.438718612724105 0.438718739774771 0.6692956 0 hPsi_site_19331 iPseU_CNN:0.6692956;iRNA_PseU:0 19332 chr9 127990317 127990317 1 + G A HNSC 127990316 + 127990296 127990336 41 GCGGGGGACAGATTCTATGATGACCTCCACTGCATTGATAT GCGGGGGACAGATTCTATGATAACCTCCACTGCATTGATAT < 41bp 0.553361436057976 0.888014873471499 0.21300587 0.304047 prediction 0.669306874827046 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127990316 chr9:127990317 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25608 0 0 0 0 1 Cytosol 0.43871858510561 0.438717088472098 0 0 hPsi_site_19332 iPseU_CNN:0;iRNA_PseU:0 19333 chrX 47101660 47101660 1 + G A CESC 47101659 + 47101639 47101679 41 TATCAGCCACAAGAGGGTCTTGGAGGTCTTCTTTATCCCCA TATCAGCCACAAGAGGGTCTTAGAGGTCTTCTTTATCCCCA < 41bp 0.418370437329243 0.834652143497053 0.38099676 0.48798534 prediction 0.669304286994107 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101659 chrX:47101660 synonymous SNV . 0 22 hPsi_associated_SNPs_25609 0 0 1 0 1 cytosol 0.43871859294112 0.43871850054881 0 0 hPsi_site_19333 iPseU_CNN:0;iRNA_PseU:0 19334 chr4 184932047 184932047 1 + G A UCEC 184932046 + 184932026 184932066 41 CGCCTCGTCCAGCACCATGGTGCCGAGCCCAGCAGCTTGGA CGCCTCGTCCAGCACCATGGTACCGAGCCCAGCAGCTTGGA < 41bp 0.423914294968126 0.834647994700173 0.32669252 0.6983574 prediction 0.669295989400347 Functional Gain - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184932046 chr4:184932047 nonsynonymous SNV 0.588 0 22 hPsi_associated_SNPs_25610 0 0 0 0 0 exosome 0.439530599770186 0.438536613586196 0.3967148 0 hPsi_site_19334 iPseU_CNN:0.3967148;iRNA_PseU:0 19335 chr2 27596742 27596742 1 + C A STAD 27596741 + 27596721 27596761 41 ACAACAGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT ACAACAGGAGACACAGCAGGTACCCACAGAGGAAGTGTCCT < 41bp 0.478376906064831 0.834645725713012 0.21331212 0.7804146 prediction 0.669291451426023 Functional Gain - SNX17 ENSG00000115234 CDS Human protein_coding chr2:27596741 chr2:27596742 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25611 0 0 1 2 2 Ribosome 0.43872287097905 0.438719923411715 0.5608292 0 hPsi_site_19335 iPseU_CNN:0.5608292;iRNA_PseU:0 19336 chr10 85964343 85964343 1 + C A UCEC 85964342 + 85964322 85964362 41 CGGGGCAAACCCAATCGAATTCTCTACAGCCTTGTAAATGG CGGGGCAAACCCAATCGAATTATCTACAGCCTTGTAAATGG < 41bp 0.531423738233862 0.866068590800663 0.71277523 0.8295107 prediction 0.669289705133602 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85964342 chr10:85964343 nonsynonymous SNV 0.163 0 22 hPsi_associated_SNPs_25612 0 0 0 0 2 cytosol 0.438718586526225 0.438718593218626 0.23347094 0 hPsi_site_19336 iPseU_CNN:0.23347094;iRNA_PseU:0 19337 chr4 16258113 16258113 1 + G A LUAD 16258112 + 16258092 16258132 41 GTGGTCCTTGGCACCGATGATGCGGTTGCTAGCGGAGCATT GTGGTCCTTGGCACCGATGATACGGTTGCTAGCGGAGCATT < 41bp 0.545668192007312 0.880310485769093 0.49512026 0.7004492 prediction 0.669284587523561 Functional Gain - TAPT1-AS1 ENSG00000242358;ENSG00000263327 ncRNA_exonic Human other chr4:16258112 chr4:16258113 . . 0 22 hPsi_associated_SNPs_25613 0 0 0 0 0 unknown 0.438790620852634 0.438720368673046 0.4008984 0 hPsi_site_19337 iPseU_CNN:0.4008984;iRNA_PseU:0 19338 chr10 43606717 43606717 1 + G A GBM 43606716 + 43606696 43606736 41 CATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACT CATCAACGTCCAGTACAAGCTACATTCCTCTGGTGCCAACT < 41bp 0.571153414053797 0.905789954803268 0.34186906 0.7371 prediction 0.669273081498942 Functional Gain - RET ENSG00000165731 CDS Human protein_coding chr10:43606716 chr10:43606717 synonymous SNV . 0 22 hPsi_associated_SNPs_25614 0 0 0 0 1 Cytosol 0.438731910490758 0.438579195428612 0.4742 0 hPsi_site_19338 iPseU_CNN:0.4742;iRNA_PseU:0 19339 chr9 22451581 22451581 1 + G A rs35310697 22451580 + 22451560 22451600 41 AGAGCTTCAAGTTTTAGTCTTGCTGGAATTGGTTTTGGAAC AGAGCTTCAAGTTTTAGTCTTACTGGAATTGGTTTTGGAAC < 41bp 0.45382132787596 0.83461943583235 0.2622135 0.50216544 prediction 0.669238871664699 Functional Gain - DMRTA1 ENSG00000176399 CDS Human protein_coding chr9:22451580 chr9:22451581 nonsynonymous SNV 0.940 0 22 hPsi_associated_SNPs_25615 0 0 0 0 0 exosome 0.438105804080801 0.438727881347152 0.00433087999999993 0 hPsi_site_19339 iPseU_CNN:0.00433087999999993;iRNA_PseU:0 19340 chr4 661735 661735 1 + G A LUAD 661734 + 661714 661754 41 AAGGCGCTGGCTGATGAGTATGAGGCCAAAGTGAAGGCTCT AAGGCGCTGGCTGATGAGTATAAGGCCAAAGTGAAGGCTCT < 41bp 0.424588467536909 0.83461876326802 0.4076681 0.5961151 prediction 0.66923752653604 Functional Gain - PDE6B ENSG00000133256 CDS Human protein_coding chr4:661734 chr4:661735 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_25616 0 0 0 0 2 Nucleus 0.438718592994567 0.438718592992266 0.1922302 0 hPsi_site_19340 iPseU_CNN:0.1922302;iRNA_PseU:0 19341 chr19 41594475 41594475 1 + G A UCEC 41594474 + 41594454 41594494 41 GAGGAAGAGCAGGGGGAAGCTGCCTCCGGGACCCACCCCAT GAGGAAGAGCAGGGGGAAGCTACCTCCGGGACCCACCCCAT < 41bp 0.558037835704481 0.892654986828769 0.1867285 0.61297476 prediction 0.669234302248576 Functional Gain - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41594474 chr19:41594475 synonymous SNV . 0 22 hPsi_associated_SNPs_25617 0 0 0 0 1 unknown 0.438718592995101 0.438718592994942 0.22594952 0 hPsi_site_19341 iPseU_CNN:0.22594952;iRNA_PseU:0 19342 chr17 42152816 42152816 1 + C A UCEC 42152815 + 42152795 42152835 41 TTACACTGGGCCTGGATCTTTCTTGGTAAGTCTCGCTTTGA TTACACTGGGCCTGGATCTTTATTGGTAAGTCTCGCTTTGA < 41bp 0.474343016608854 0.834607208032164 0.314377 0.39359146 prediction 0.669214416064329 Functional Gain - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42152815 chr17:42152816 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25618 0 0 1 0 1 Ribosome 0.438721384868914 0.438713626508311 0 0 hPsi_site_19342 iPseU_CNN:0;iRNA_PseU:0 19343 chr7 100730662 100730662 1 + C A UCEC 100730661 + 100730641 100730681 41 CGACTTCCTGGCCTGTAAAATCTGCCTGGAGCAGCTGCGGG CGACTTCCTGGCCTGTAAAATATGCCTGGAGCAGCTGCGGG < 41bp 0.489433484264863 0.83460299593066 0.27660948 0.46115926 prediction 0.669205991861321 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730661 chr7:100730662 synonymous SNV . 0 22 hPsi_associated_SNPs_25619 0 0 0 0 0 nucleus 0.438719019577078 0.438708907049407 0 0 hPsi_site_19343 iPseU_CNN:0;iRNA_PseU:0 19344 chrX 153688836 153688836 1 + G A UCEC 153688835 + 153688815 153688855 41 AAGCTGCTGCTCATAGACTATGCGGCCCGCCGCCTGGTGGC AAGCTGCTGCTCATAGACTATACGGCCCGCCGCCTGGTGGC < 41bp 0.426910868655075 0.834602182974277 0.2787416 0.6085876 prediction 0.669204365948554 Functional Gain - PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153688835 chrX:153688836 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_25620 0 0 0 0 0 Endoplasmic reticulum 0.438718592995855 0.438718594089048 0.2171752 0 hPsi_site_19344 iPseU_CNN:0.2171752;iRNA_PseU:0 19345 chr2 207459556 207459556 1 + G A THYM 207459555 + 207459535 207459575 41 TGATGTGTTTAGATCGGAAGTGCCTACAAATTCAAGCCCTA TGATGTGTTTAGATCGGAAGTACCTACAAATTCAAGCCCTA < 41bp 0.437262358455455 0.834594679808472 0.18024293 0.2721301 prediction 0.669189359616943 Functional Gain - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207459555 chr2:207459556 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25621 0 0 1 1 2 Ribosome 0.438718332683818 0.438638587668706 0 0 hPsi_site_19345 iPseU_CNN:0;iRNA_PseU:0 19346 chr17 26851676 26851676 1 + C A rs374082998 26851675 + 26851655 26851695 41 CGGCCCTGGGCCCTTCAGGCTCTCACCCTCAGACAAGTATC CGGCCCTGGGCCCTTCAGGCTATCACCCTCAGACAAGTATC < 41bp 0.524632625136896 0.859226356127977 0.25745046 0.45615068 prediction 0.669187461982163 Functional Gain - FOXN1 ENSG00000109101 CDS Human protein_coding chr17:26851675 chr17:26851676 synonymous SNV . 0 22 hPsi_associated_SNPs_25622 0 0 0 0 0 exosome 0.438719056948399 0.438718592991503 0 0 hPsi_site_19346 iPseU_CNN:0;iRNA_PseU:0 19347 chr11 56128589 56128589 1 + G A SKCM 56128588 + 56128568 56128608 41 AATTCCTATGCTGAATCCCTTGATCTACAGCCTGAGGAATA AATTCCTATGCTGAATCCCTTAATCTACAGCCTGAGGAATA < 41bp 0.464825353937009 0.834590383336239 0.3985181 0.7509903 prediction 0.669180766672478 Functional Gain - OR8J1 ENSG00000172487 CDS Human protein_coding chr11:56128588 chr11:56128589 synonymous SNV . 0 22 hPsi_associated_SNPs_25623 0 0 0 0 0 unknown 0.438718664477303 0.438718592991904 0.5019806 0 hPsi_site_19347 iPseU_CNN:0.5019806;iRNA_PseU:0 19348 chr20 31376692 31376692 1 + G A BRCA 31376691 + 31376671 31376711 41 GTTTGGAATAGGGGACCTCGTGTGGGGAAAGATCAAGGGCT GTTTGGAATAGGGGACCTCGTATGGGGAAAGATCAAGGGCT < 41bp 0.441145694015013 0.834588717383488 0.32293832 0.6826375 prediction 0.669177434766975 Functional Gain - DNMT3B ENSG00000088305 CDS Human protein_coding chr20:31376691 chr20:31376692 synonymous SNV . 0 22 hPsi_associated_SNPs_25624 0 0 0 0 1 chromatin 0.438718591764038 0.438718122275012 0.365275 0 hPsi_site_19348 iPseU_CNN:0.365275;iRNA_PseU:0 19349 chr2 25022589 25022589 1 + C A rs142759452 25022588 + 25022568 25022608 41 TAGAGACCCAAGTGAGCAGATCCCGTAAACAGTCTGAAGAG TAGAGACCCAAGTGAGCAGATACCGTAAACAGTCTGAAGAG < 41bp 0.472219821128476 0.834587786301273 0.22231507 0.5926466 prediction 0.669175572602547 Functional Gain - CENPO ENSG00000138092 CDS Human protein_coding chr2:25022588 chr2:25022589 nonsynonymous SNV 0.012 0 22 hPsi_associated_SNPs_25625 0 0 1 0 1 Ribosome 0.438718591198343 0.438718577468508 0.1852932 0 hPsi_site_19349 iPseU_CNN:0.1852932;iRNA_PseU:0 19350 chr7 6189487 6189487 1 + C A rs191930676 6189486 + 6189466 6189506 41 GAGAACCCTACCAAGCCCGTTCCCTCTTCTACCATTACCAA GAGAACCCTACCAAGCCCGTTACCTCTTCTACCATTACCAA < 41bp 0.5364806078973 0.871067776173961 0.22531772 0.47157347 prediction 0.669174336553322 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6189486 chr7:6189487 nonsynonymous SNV 0.825 4 22 hPsi_associated_SNPs_25626 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_19350 iPseU_CNN:0;iRNA_PseU:0 19351 chr16 8866739 8866739 1 + G A SKCM 8866738 + 8866718 8866758 41 GGAGACAACCACGCATCCGATGACTTCTTTCGGAAGCTGAG GGAGACAACCACGCATCCGATAACTTCTTTCGGAAGCTGAG < 41bp 0.409594403366714 0.834583774759895 0.3159898 0.4199862 prediction 0.66916754951979 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8866738 chr16:8866739 nonsynonymous SNV 0.830 1 22 hPsi_associated_SNPs_25627 0 0 1 0 1 cytosol 0.438717457458107 0.438713075265408 0 0 hPsi_site_19351 iPseU_CNN:0;iRNA_PseU:0 19352 chr2 219498451 219498451 1 + G A OV 219498450 + 219498430 219498470 41 TACGAGATATCATCTTTCTCTGAAACCAAGGCCAAGCGCCT TACGAGATATCATCTTTCTCTAAAACCAAGGCCAAGCGCCT < 41bp 0.425323370376984 0.834583064191319 0.33017072 0.49405047 prediction 0.669166128382638 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219498450 chr2:219498451 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_25628 0 0 0 0 1 chromatin 0.438718838766499 0.438718598284807 0 0 hPsi_site_19352 iPseU_CNN:0;iRNA_PseU:0 19353 chr4 17524575 17524575 1 + C A LUSC 17524574 + 17524554 17524594 41 GGCCTTGGCCCTGGCTCTGGTCAGCATGGGCTTTGCCATTC GGCCTTGGCCCTGGCTCTGGTAAGCATGGGCTTTGCCATTC < 41bp 0.530817877030773 0.865394894009339 0.12717018 0.43886167 prediction 0.669154033957131 Functional Gain - CLRN2 ENSG00000249581 CDS Human protein_coding chr4:17524574 chr4:17524575 synonymous SNV . 0 22 hPsi_associated_SNPs_25629 0 0 0 0 2 unknown 0.438718593032598 0.438718592995512 0 0 hPsi_site_19353 iPseU_CNN:0;iRNA_PseU:0 19354 chr9 134308042 134308042 1 + G A BLCA 134308041 + 134308021 134308061 41 TTACAGAGTCTTGGGAAAGTTGCTGCAGCCCGGCGCATGCC TTACAGAGTCTTGGGAAAGTTACTGCAGCCCGGCGCATGCC < 41bp 0.424765128442488 0.834557050873752 0.27319038 0.6842673 prediction 0.669114101747504 Functional Gain - PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134308041 chr9:134308042 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25630 0 0 1 0 1 Nucleus 0.438718595558237 0.438717490152783 0.3685346 0 hPsi_site_19354 iPseU_CNN:0.3685346;iRNA_PseU:0 19355 chr2 169952088 169952088 1 + G A UCEC 169952087 + 169952067 169952107 41 GAAAGGCAATAAATCCTATGTGAACATGGACCTCTCTCCGG GAAAGGCAATAAATCCTATGTAAACATGGACCTCTCTCCGG < 41bp 0.449186761168344 0.83455608247404 0.21867946 0.31330055 prediction 0.669112164948079 Functional Gain - DHRS9 ENSG00000073737 CDS Human protein_coding chr2:169952087 chr2:169952088 synonymous SNV . 0 22 hPsi_associated_SNPs_25631 0 0 0 0 1 exosome 0.438717343075868 0.438718592993836 0 0 hPsi_site_19355 iPseU_CNN:0;iRNA_PseU:0 19356 chr14 50074354 50074354 1 + G A UCEC 50074353 + 50074333 50074373 41 TGTCCGAGTTGATATGCGTATGCTTTGCTTAAAAAGCCTTA TGTCCGAGTTGATATGCGTATACTTTGCTTAAAAAGCCTTA < 41bp 0.451397079711552 0.834551040817548 0.24853122 0.38856858 prediction 0.669102081635096 Functional Gain - LRR1 ENSG00000165501 CDS Human protein_coding chr14:50074353 chr14:50074354 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25632 0 0 1 0 0 Ribosome 0.438718659524608 0.438719675655736 0 0 hPsi_site_19356 iPseU_CNN:0;iRNA_PseU:0 19357 chr9 126133745 126133745 1 + G A UCEC 126133744 + 126133724 126133764 41 AGGACCTGCGACTCGATGGCTGCCACCTCCCCTTCTTTCCT AGGACCTGCGACTCGATGGCTACCACCTCCCCTTCTTTCCT < 41bp 0.563367897377934 0.897916106935976 0.33174986 0.67321926 prediction 0.669096419116084 Functional Gain - CRB2 ENSG00000148204 CDS Human protein_coding chr9:126133744 chr9:126133745 nonsynonymous SNV 0.063 0 22 hPsi_associated_SNPs_25633 0 0 0 0 0 exosome 0.438110563277275 0.438815082751979 0.34643852 0 hPsi_site_19357 iPseU_CNN:0.34643852;iRNA_PseU:0 19358 chr1 53927203 53927203 1 + C A LUAD 53927202 + 53927182 53927222 41 GCCCTGAGTACCCTGGTGGCTCCAGCATGCACCCCTACTGC GCCCTGAGTACCCTGGTGGCTACAGCATGCACCCCTACTGC < 41bp 0.524365191618259 0.858909726797057 0.22263402 0.6158788 prediction 0.669089070357598 Functional Gain - DMRTB1 ENSG00000143006 CDS Human protein_coding chr1:53927202 chr1:53927203 nonsynonymous SNV 0.085 1 22 hPsi_associated_SNPs_25634 0 0 0 0 1 unknown 0.438718592995289 0.43871861149738 0.2317576 0 hPsi_site_19358 iPseU_CNN:0.2317576;iRNA_PseU:0 19359 chr1 2328608 2328608 1 + C A UCEC 2328607 + 2328587 2328627 41 CTACACGGCTGTGCGATGGGTCGTGACACTGGGCCTGAGCT CTACACGGCTGTGCGATGGGTAGTGACACTGGGCCTGAGCT < 41bp 0.530416201645295 0.864958445104401 0.24260363 0.58568704 prediction 0.669084486918212 Functional Gain - RER1 ENSG00000157916 CDS Human protein_coding chr1:2328607 chr1:2328608 synonymous SNV . 0 22 hPsi_associated_SNPs_25635 0 0 1 0 2 Ribosome 0.439107373872646 0.438717753469557 0.17137408 0 hPsi_site_19359 iPseU_CNN:0.17137408;iRNA_PseU:0 19360 chr2 132021562 132021562 1 + C A UCEC 132021561 + 132021541 132021581 41 CCGTGCCGTCCCTGTACACCTCTGGCCGTACTACTGGCATC CCGTGCCGTCCCTGTACACCTATGGCCGTACTACTGGCATC < 41bp 0.525373128450786 0.859914599800381 0.16001865 0.22792903 prediction 0.66908294269919 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021561 chr2:132021562 nonsynonymous SNV 0.143 4 22 hPsi_associated_SNPs_25636 0 0 1 0 0 chromatin 0.438718551554117 0.438718596361105 0 0 hPsi_site_19360 iPseU_CNN:0;iRNA_PseU:0 19361 chr19 17972200 17972200 1 + C A BLCA 17972199 + 17972179 17972219 41 CTTTGCGCCTAATCATGTCGTCGCCAAGTCCCGCTTCTGGT CTTTGCGCCTAATCATGTCGTAGCCAAGTCCCGCTTCTGGT < 41bp 0.526362219077611 0.860898824920257 0.23160917 0.3491349 prediction 0.669073211685292 Functional Gain - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17972199 chr19:17972200 synonymous SNV . 0 22 hPsi_associated_SNPs_25637 0 0 0 0 2 Cytosol 0.438718825715161 0.438715412036282 0 0 hPsi_site_19361 iPseU_CNN:0;iRNA_PseU:0 19362 chr17 57290275 57290275 1 + G A COAD 57290274 + 57290254 57290294 41 CACGAGCCTGAGTTTAGCTTTGAGTTTGGGCCAATCCACAG CACGAGCCTGAGTTTAGCTTTAAGTTTGGGCCAATCCACAG < 41bp 0.56315272838096 0.897685493944218 0.34026808 0.46464148 prediction 0.669065531126515 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57290274 chr17:57290275 synonymous SNV . 0 22 hPsi_associated_SNPs_25638 0 0 1 0 0 chromatin 0.438718299481707 0.438718580652536 0 0 hPsi_site_19362 iPseU_CNN:0;iRNA_PseU:0 19363 chr20 30898573 30898573 1 + G A rs143532330 30898572 + 30898552 30898592 41 AGAAGAGACTCTGACCACTCTGCGATATGCCAACCGTGCCA AGAAGAGACTCTGACCACTCTACGATATGCCAACCGTGCCA < 41bp 0.431254028238456 0.834527855248923 0.2627113 0.43392158 prediction 0.669055710497846 Functional Gain - KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898572 chr20:30898573 synonymous SNV . 0 22 hPsi_associated_SNPs_25639 0 0 1 0 0 Ribosome 0.437936562164082 0.43839395892211 0 0 hPsi_site_19363 iPseU_CNN:0;iRNA_PseU:0 19364 chrX 102612838 102612838 1 + G A COAD 102612837 + 102612817 102612857 41 GATATGTTTAGAGAAGTGGATGAAATAGATGAGATAAGGAG GATATGTTTAGAGAAGTGGATAAAATAGATGAGATAAGGAG < 41bp 0.468173600437468 0.834527560654042 0.26932576 0.35151565 prediction 0.669055121308084 Functional Gain - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612837 chrX:102612838 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25640 0 0 1 0 0 Cytosol 0.440096665346878 0.438446000464331 0 0 hPsi_site_19364 iPseU_CNN:0;iRNA_PseU:0 19365 chr2 128186264 128186264 1 + C A UCEC 128186263 + 128186243 128186283 41 GCACAATGAGTGCAGCGAGGTCATGAGCAACATGGTGTCTG GCACAATGAGTGCAGCGAGGTAATGAGCAACATGGTGTCTG < 41bp 0.47903349977711 0.834524478703586 0.22223404 0.5771491 prediction 0.669048957407172 Functional Gain - PROC ENSG00000115718 CDS Human protein_coding chr2:128186263 chr2:128186264 synonymous SNV . 0 22 hPsi_associated_SNPs_25641 0 0 1 0 0 nucleus 0.442624927070401 0.439389591620847 0.1542982 0 hPsi_site_19365 iPseU_CNN:0.1542982;iRNA_PseU:0 19366 chr6 13977868 13977868 1 + G A LUSC 13977867 + 13977847 13977887 41 ACAACTGGACTGTGTGGAACTGCACGTCCCTGCTGTTTCAG ACAACTGGACTGTGTGGAACTACACGTCCCTGCTGTTTCAG < 41bp 0.560648483599461 0.895167136133808 0.28834632 0.48648295 prediction 0.669037305068694 Functional Gain - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977867 chr6:13977868 nonsynonymous SNV 0.876 4 22 hPsi_associated_SNPs_25642 0 0 1 0 0 chromatin 0.438598431649791 0.438687663100062 0 0 hPsi_site_19366 iPseU_CNN:0;iRNA_PseU:0 19367 chr1 144014069 144014069 1 + G A KICH 144014068 + 144014048 144014088 41 AACGCTTCCTGGCCAAGACATGCAGCACCAAGGACCAGCAA AACGCTTCCTGGCCAAGACATACAGCACCAAGGACCAGCAA < 41bp 0.540650663809965 0.87516730295964 0.43000865 0.6456815 prediction 0.66903327829935 Functional Gain - FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014068 chr1:144014069 . 0.988 0 22 hPsi_associated_SNPs_25643 0 0 1 0 1 unknown 0.438718592995102 0.43871859299487 0.291363 0 hPsi_site_19367 iPseU_CNN:0.291363;iRNA_PseU:0 19368 chr16 24366264 24366264 1 + C A COAD 24366263 + 24366243 24366283 41 CGCAGCAGACACAACGTCATTCTCAGCGCGGGCATCTTTTT CGCAGCAGACACAACGTCATTATCAGCGCGGGCATCTTTTT < 41bp 0.53148737232189 0.866002426050134 0.6429796 0.61646676 prediction 0.669030107456488 Functional Gain - CACNG3 ENSG00000006116 CDS Human protein_coding chr16:24366263 chr16:24366264 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25644 0 0 0 0 1 nucleus 0.43871398468299 0.438825366362813 0 0 hPsi_site_19368 iPseU_CNN:0;iRNA_PseU:0 19369 chr5 96315631 96315631 1 + C A UCEC 96315630 + 96315610 96315650 41 ACTCGGCAAATATATCTAGTTCTTATTATGGGTTTTATGGC ACTCGGCAAATATATCTAGTTATTATTATGGGTTTTATGGC < 41bp 0.495050028032738 0.834511670915727 0.23890013 0.2951268 prediction 0.669023341831453 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96315630 chr5:96315631 nonsynonymous SNV 0.781 2 22 hPsi_associated_SNPs_25645 0 0 1 0 1 Endoplasmic reticulum 0.438718543736901 0.438718570495282 0 0 hPsi_site_19369 iPseU_CNN:0;iRNA_PseU:0 19370 chr1 12266884 12266884 1 + C A CESC 12266883 + 12266863 12266903 41 CTGACCACAGCTCACAGTGCTCCTCCCAAGCCAGCTCCACA CTGACCACAGCTCACAGTGCTACTCCCAAGCCAGCTCCACA < 41bp 0.517955476184386 0.85246707857792 0.29940313 0.7473233 prediction 0.669023204787068 Functional Gain - TNFRSF1B ENSG00000028137 CDS Human protein_coding chr1:12266883 chr1:12266884 nonsynonymous SNV 0.921 3 22 hPsi_associated_SNPs_25646 0 0 0 0 1 Ribosome 0.438677549423708 0.438748049277967 0.4946466 0 hPsi_site_19370 iPseU_CNN:0.4946466;iRNA_PseU:0 19371 chr17 48133956 48133956 1 + C A UCEC 48133955 + 48133935 48133975 41 GGCCGGGAACCCGGGCAGCCTCTTCGGCTACTCGGTCGCCC GGCCGGGAACCCGGGCAGCCTATTCGGCTACTCGGTCGCCC < 41bp 0.512981092148624 0.847489405831165 0.47204345 0.40896603 prediction 0.669016627365081 Functional Gain - ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48133955 chr17:48133956 synonymous SNV . 0 22 hPsi_associated_SNPs_25647 0 0 0 0 1 Cytosol 0.438718640838403 0.438722432698737 0 0 hPsi_site_19371 iPseU_CNN:0;iRNA_PseU:0 19372 chr2 191233856 191233856 1 + C A UCEC 191233855 + 191233835 191233875 41 CTTATCAGTATATAAAAGGTTCTGCTGACATTAAATCCAAC CTTATCAGTATATAAAAGGTTATGCTGACATTAAATCCAAC < 41bp 0.518917062365732 0.853423937003897 0.21131164 0.29804918 prediction 0.66901374927633 Functional Gain - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191233855 chr2:191233856 nonsynonymous SNV 0.521 1 22 hPsi_associated_SNPs_25648 0 0 1 0 1 exosome 0.438402360848152 0.438995395967251 0 0 hPsi_site_19372 iPseU_CNN:0;iRNA_PseU:0 19373 chrX 1532416 1532416 1 + G A rs5989844 1532415 + 1532395 1532435 41 GCCCCAGGAGGGTTGCCTGTTGCGGGGGGCGCATGTAGCTG GCCCCAGGAGGGTTGCCTGTTACGGGGGGCGCATGTAGCTG < 41bp 0.44373241210234 0.834505440595491 0.37589884 0.6943425 prediction 0.669010881190983 Functional Gain - ASMTL-AS1 ENSG00000236017 ncRNA_intronic Human antisense chrX:1532415 chrX:1532416 . . 0 22 hPsi_associated_SNPs_25649 0 0 0 0 0 unknown 0.438718592995102 0.438718592995105 0.388685 0 hPsi_site_19373 iPseU_CNN:0.388685;iRNA_PseU:0 19374 chr1 44134949 44134949 1 + G A GBM 44134948 + 44134928 44134968 41 CATAGCTCTGTGCGGCAAGTTGAGGATGGTCTTACCTTCCC CATAGCTCTGTGCGGCAAGTTAAGGATGGTCTTACCTTCCC < 41bp 0.561525156164233 0.896026759232555 0.390789 0.7614826 prediction 0.669003206136643 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134948 chr1:44134949 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_25650 0 0 1 0 1 Nucleus 0.438718503751603 0.438713360661894 0.5229652 0 hPsi_site_19374 iPseU_CNN:0.5229652;iRNA_PseU:0 19375 chr1 8390873 8390873 1 + G A SKCM 8390872 + 8390852 8390892 41 CATTCTGAGGGTGGGCTCCTTGGACACCTCTAAGCCGAGGT CATTCTGAGGGTGGGCTCCTTAGACACCTCTAAGCCGAGGT < 41bp 0.43542650283499 0.834501078804637 0.33707553 0.74538475 prediction 0.669002157609275 Functional Gain - SLC45A1 ENSG00000162426 CDS Human protein_coding chr1:8390872 chr1:8390873 synonymous SNV . 0 22 hPsi_associated_SNPs_25651 0 0 0 0 0 exosome 0.438718592502812 0.438718545697603 0.4907695 0 hPsi_site_19375 iPseU_CNN:0.4907695;iRNA_PseU:0 19376 chr8 145066086 145066086 1 + C A OV 145066085 + 145066065 145066105 41 TGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACT TGCAGCTGTCGGTGACCCTGTACACGGTGTCTGTGTTCACT < 41bp 0.536074909641153 0.870571931301121 0.2441183 0.6178398 prediction 0.668994043319936 Functional Gain - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066085 chr8:145066086 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25652 0 0 1 0 1 Endoplasmic reticulum 0.452294834328486 0.43782127504167 0.2356796 0 hPsi_site_19376 iPseU_CNN:0.2356796;iRNA_PseU:0 19377 chr1 224868723 224868723 1 + C A PAAD 224868722 + 224868702 224868742 41 ATAGACCAGTGCAATCCTGTTCATGCGGTAAGTGGCGGGTA ATAGACCAGTGCAATCCTGTTAATGCGGTAAGTGGCGGGTA < 41bp 0.475930372599167 0.834489560559706 0.17541799 0.2990799 prediction 0.668979121119413 Functional Gain - CNIH3 ENSG00000143786 CDS Human protein_coding chr1:224868722 chr1:224868723 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25653 0 0 0 0 2 exosome 0.438614100850918 0.438713211989031 0 0 hPsi_site_19377 iPseU_CNN:0;iRNA_PseU:0 19378 chr11 44072140 44072140 1 + G A COAD 44072139 + 44072119 44072159 41 GAACTGCATTGAGGACACCTTGCTTCAGTACCCTGATTGGA GAACTGCATTGAGGACACCTTACTTCAGTACCCTGATTGGA < 41bp 0.425547722325038 0.834488153722959 0.4428618 0.7072109 prediction 0.668976307445918 Functional Gain - ACCSL ENSG00000205126 CDS Human protein_coding chr11:44072139 chr11:44072140 synonymous SNV . 0 22 hPsi_associated_SNPs_25654 0 0 0 0 2 Exosome 0.440343840621138 0.445908965241692 0.4144218 0 hPsi_site_19378 iPseU_CNN:0.4144218;iRNA_PseU:0 19379 chr16 30727788 30727788 1 + C A OV 30727787 + 30727767 30727807 41 GGTGCTAAGGGCCACGGATGTCCATCCCCTCCAGGTAAGTA GGTGCTAAGGGCCACGGATGTACATCCCCTCCAGGTAAGTA < 41bp 0.481768786834039 0.834486186325812 0.39599362 0.81703866 prediction 0.668972372651625 Functional Gain - SRCAP ENSG00000080603 CDS Human protein_coding chr16:30727787 chr16:30727788 synonymous SNV . 0 22 hPsi_associated_SNPs_25655 0 0 1 0 1 Ribosome 0.438718592994874 0.438718593028573 0.63407732 0 hPsi_site_19379 iPseU_CNN:0.63407732;iRNA_PseU:0 19380 chr13 49281214 49281214 1 + C A UCEC 49281213 + 49281193 49281233 41 GGCCATTTCAGATCTCCTGTTCATAAGCACGCTTCCCTTCA GGCCATTTCAGATCTCCTGTTAATAAGCACGCTTCCCTTCA < 41bp 0.496076110582099 0.834484482965398 0.33811635 0.6482982 prediction 0.668968965930795 Functional Gain - CYSLTR2 ENSG00000152207 CDS Human protein_coding chr13:49281213 chr13:49281214 nonsynonymous SNV 0.924 2 22 hPsi_associated_SNPs_25656 0 0 0 0 0 exosome 0.438713499723643 0.438716202065183 0.2965964 0 hPsi_site_19380 iPseU_CNN:0.2965964;iRNA_PseU:0 19381 chr15 90768614 90768614 1 + C A rs148540973 90768613 + 90768593 90768633 41 ACAGCCCGTGCAGAATCTGCTCCTGGACACCCACAGGGTGA ACAGCCCGTGCAGAATCTGCTACTGGACACCCACAGGGTGA < 41bp 0.467392333837887 0.834481259650768 0.1537678 0.6867656 prediction 0.668962519301537 Functional Gain - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90768613 chr15:90768614 synonymous SNV . 0 22 hPsi_associated_SNPs_25657 0 0 1 0 0 chromatin 0.43871846476475 0.43872709263299 0.3735312 0 hPsi_site_19381 iPseU_CNN:0.3735312;iRNA_PseU:0 19382 chr17 76399981 76399981 1 + G A OV 76399980 + 76399960 76400000 41 CTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGC CTGGTCTTGGGCACTCGGGCTAAGTACCAGATCCTGCTGGC < 41bp 0.567867432241906 0.902347411267269 0.38124838 0.73978424 prediction 0.668959958050727 Functional Gain - PGS1 ENSG00000087157 CDS Human protein_coding chr17:76399980 chr17:76399981 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_25658 0 0 1 1 0 chromatin 0.438878364871214 0.438718726294219 0.47956848 0 hPsi_site_19382 iPseU_CNN:0.47956848;iRNA_PseU:0 19383 chr1 240070898 240070898 1 + C A UCEC 240070897 + 240070877 240070917 41 TTCTCGAGCAGCTGGCAATTTCTCCTCTCCAGACGGTACCA TTCTCGAGCAGCTGGCAATTTATCCTCTCCAGACGGTACCA < 41bp 0.516279950507594 0.85075949775439 0.46663874 0.46714473 prediction 0.668959094493591 Functional Gain - CHRM3 ENSG00000133019 CDS Human protein_coding chr1:240070897 chr1:240070898 nonsynonymous SNV 0.610 0 22 hPsi_associated_SNPs_25659 0 0 0 0 0 exosome 0.438682614912503 0.439113103093171 0 0 hPsi_site_19383 iPseU_CNN:0;iRNA_PseU:0 19384 chr15 34640257 34640257 1 + C A LUAD 34640256 + 34640236 34640276 41 TTCCCTTTCTCCCACCAACTTCTGACCCACCAGACCACCCA TTCCCTTTCTCCCACCAACTTATGACCCACCAGACCACCCA < 41bp 0.527147305192407 0.861626251562883 0.25201055 0.27203688 prediction 0.66895789274095 Functional Gain - NUTM1 ENSG00000184507 CDS Human protein_coding chr15:34640256 chr15:34640257 nonsynonymous SNV 0.009 2 22 hPsi_associated_SNPs_25660 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_19384 iPseU_CNN:0;iRNA_PseU:0 19385 chrX 37850445 37850445 1 + G A SKCM 37850444 + 37850424 37850464 41 CCAAATCCAGGAAGAATGACTGAAGACTGGGTCCCAGAGCC CCAAATCCAGGAAGAATGACTAAAGACTGGGTCCCAGAGCC < 41bp 0.465415815997487 0.834476956249869 0.20615447 0.27657932 prediction 0.668953912499738 Functional Gain - HYPM ENSG00000187516 CDS Human protein_coding chrX:37850444 chrX:37850445 synonymous SNV . 0 22 hPsi_associated_SNPs_25661 0 0 0 0 0 exosome 0.438718577794136 0.438718595726373 0 0 hPsi_site_19385 iPseU_CNN:0;iRNA_PseU:0 19386 chr8 56912024 56912024 1 + G A BRCA 56912023 + 56912003 56912043 41 GCTCCAGAAGCAATCAACTTTGGATGTTTCACTATTAAGTC GCTCCAGAAGCAATCAACTTTAGATGTTTCACTATTAAGTC < 41bp 0.42543914555266 0.83446660536873 0.24131054 0.47586215 prediction 0.66893321073746 Functional Gain - LYN ENSG00000254087 CDS Human protein_coding chr8:56912023 chr8:56912024 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_25662 0 0 0 0 2 Cytosol 0.438718407434739 0.438673659154638 0 0 hPsi_site_19386 iPseU_CNN:0;iRNA_PseU:0 19387 chr1 46032663 46032663 1 + G A LAML 46032662 + 46032642 46032682 41 CCAGCTGGAGTATCTGGACCTGTACCTGATGCACTGGCCTT CCAGCTGGAGTATCTGGACCTATACCTGATGCACTGGCCTT < 41bp 0.426316606152296 0.834466057694939 0.359596 0.78116214 prediction 0.668932115389879 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46032662 chr1:46032663 synonymous SNV . 0 22 hPsi_associated_SNPs_25663 0 0 1 0 1 Ribosome 0.438718591524599 0.438718607321339 0.56232428 0 hPsi_site_19387 iPseU_CNN:0.56232428;iRNA_PseU:0 19388 chr4 109541761 109541761 1 + G A rs567821117 109541760 + 109541740 109541780 41 GGGGACGTTGTCTGCAGGTATGGATGTTGTTCTCTTTTCCC GGGGACGTTGTCTGCAGGTATAGATGTTGTTCTCTTTTCCC < 41bp 0.480317749994643 0.834464462897846 0.23103943 0.33037215 prediction 0.668928925795692 Functional Gain - RPL34 ENSG00000109475 UTR5 Human protein_coding chr4:109541760 chr4:109541761 . . 0 22 hPsi_associated_SNPs_25664 0 0 1 0 0 Nucleus 0.43874258553192 0.438718619200356 0 0 hPsi_site_19388 iPseU_CNN:0;iRNA_PseU:0 19389 chr11 55658701 55658701 1 + G A SKCM 55658700 + 55658680 55658720 41 GTTGGATGTGACCCTCAAGATGATCCCGATATCACTGGAAA GTTGGATGTGACCCTCAAGATAATCCCGATATCACTGGAAA < 41bp 0.441229465853933 0.834459142701138 0.39117202 0.7306717 prediction 0.668918285402276 Functional Gain - TRIM51 ENSG00000124900 CDS Human protein_coding chr11:55658700 chr11:55658701 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_25665 0 0 0 0 1 unknown 0.438787856625089 0.438718837067188 0.4613434 0 hPsi_site_19389 iPseU_CNN:0.4613434;iRNA_PseU:0 19390 chr17 32612836 32612836 1 + C A UCEC 32612835 + 32612815 32612855 41 TTCAGCCTCCAACATGAAGGTCTCCGCAGCACTTCTGTGGC TTCAGCCTCCAACATGAAGGTATCCGCAGCACTTCTGTGGC < 41bp 0.510065433739888 0.844523338748596 0.25258163 0.69599795 prediction 0.668915810017417 Functional Gain - CCL11 ENSG00000172156 CDS Human protein_coding chr17:32612835 chr17:32612836 synonymous SNV . 0 22 hPsi_associated_SNPs_25666 0 0 0 0 1 exosome 0.438718640582131 0.438393894683639 0.3919959 0 hPsi_site_19390 iPseU_CNN:0.3919959;iRNA_PseU:0 19391 chr1 221057702 221057702 1 + G A BLCA 221057701 + 221057681 221057721 41 AGCCGTTCTGAAGGCGAGGCTGAGAGCGAGAGCAGCGACTC AGCCGTTCTGAAGGCGAGGCTAAGAGCGAGAGCAGCGACTC < 41bp 0.445992459470536 0.834457365739177 0.24173775 0.58525586 prediction 0.668914731478354 Functional Gain - HLX ENSG00000136630 CDS Human protein_coding chr1:221057701 chr1:221057702 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25667 0 0 1 0 0 exosome 0.438721278174345 0.438719244780122 0.17051172 0 hPsi_site_19391 iPseU_CNN:0.17051172;iRNA_PseU:0 19392 chr1 44877943 44877943 1 + G A STAD 44877942 + 44877922 44877962 41 TGTCTCAGTTGACAAGGACGTGCATATTCCTTTCACCAACG TGTCTCAGTTGACAAGGACGTACATATTCCTTTCACCAACG < 41bp 0.554468922862587 0.888922451916785 0.37548774 0.78715473 prediction 0.668907058108395 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:44877942 chr1:44877943 synonymous SNV . 0 22 hPsi_associated_SNPs_25668 0 0 1 0 0 Ribosome 0.439036850986168 0.438839385200989 0.57430946 0 hPsi_site_19392 iPseU_CNN:0.57430946;iRNA_PseU:0 19393 chr8 124141352 124141352 1 + G A LUAD 124141351 + 124141331 124141371 41 AAAGTCGACCAGCAAAGAGTTGAAGATGAAGCTTGGTACCA AAAGTCGACCAGCAAAGAGTTAAAGATGAAGCTTGGTACCA < 41bp 0.561976582977202 0.896426042249417 0.3347764 0.7206337 prediction 0.66889891854443 Functional Gain - TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124141351 chr8:124141352 nonsynonymous SNV 0.741 0 22 hPsi_associated_SNPs_25669 0 0 1 0 2 Cytosol 0.438744886824908 0.438698053607711 0.4412674 0 hPsi_site_19393 iPseU_CNN:0.4412674;iRNA_PseU:0 19394 chr20 55918444 55918444 1 + G A UCEC 55918443 + 55918423 55918463 41 GAAGGCAGAAATTCAAGCTTTGACTTTCCTATCATCAGATT GAAGGCAGAAATTCAAGCTTTAACTTTCCTATCATCAGATT < 41bp 0.474183223412729 0.834446726826915 0.24541715 0.39483485 prediction 0.668893453653831 Functional Gain - SPO11 ENSG00000054796 CDS Human protein_coding chr20:55918443 chr20:55918444 synonymous SNV . 0 22 hPsi_associated_SNPs_25670 0 0 0 0 1 unknown 0.438718577779657 0.438718719020402 0 0 hPsi_site_19394 iPseU_CNN:0;iRNA_PseU:0 19395 chr9 107267009 107267009 1 + G A LUSC 107267008 + 107266988 107267028 41 TGGATGACAGGCTGTCTCACTGCCATGGTGGAAATGATGTC TGGATGACAGGCTGTCTCACTACCATGGTGGAAATGATGTC < 41bp 0.449921756246292 0.834443543398564 0.24524459 0.38292184 prediction 0.668887086797127 Functional Gain - OR13F1 ENSG00000186881 CDS Human protein_coding chr9:107267008 chr9:107267009 nonsynonymous SNV 0.958 1 22 hPsi_associated_SNPs_25671 0 0 0 0 0 unknown 0.435620264128976 0.411862127537441 0 0 hPsi_site_19395 iPseU_CNN:0;iRNA_PseU:0 19396 chr17 34068216 34068216 1 + G A HNSC 34068215 + 34068195 34068235 41 GTACAACTGGCACATCCTGCTGCTCTTCAGCGAGCTGCTCA GTACAACTGGCACATCCTGCTACTCTTCAGCGAGCTGCTCA < 41bp 0.554176540558294 0.888617679092354 0.3477234 0.8673508 prediction 0.66888227706812 Functional Gain - RASL10B ENSG00000141150 CDS Human other chr17:34068215 chr17:34068216 synonymous SNV . 0 22 hPsi_associated_SNPs_25672 0 0 0 0 0 insoluble cytoplasm 0.439065055191716 0.439253029851019 0.7347016 0 hPsi_site_19396 iPseU_CNN:0.7347016;iRNA_PseU:0 19397 chr10 124922210 124922210 1 + C A OV 124922209 + 124922189 124922229 41 CCATCGGTACCCCACGAGCATCGCATCACTTGCCTTCAGTA CCATCGGTACCCCACGAGCATAGCATCACTTGCCTTCAGTA < 41bp 0.509731745504849 0.844168235071405 0.13151324 0.17601469 prediction 0.668872979133112 Functional Gain - BUB3 ENSG00000154473 CDS Human protein_coding chr10:124922209 chr10:124922210 synonymous SNV . 0 22 hPsi_associated_SNPs_25673 0 0 1 0 1 Ribosome 0.438718595032296 0.438715907750003 0 0 hPsi_site_19397 iPseU_CNN:0;iRNA_PseU:0 19398 chr9 131122696 131122696 1 + G A HNSC 131122695 + 131122675 131122715 41 GACCCGCTGTTCTATCTAGATGCCCAGAAGGGCCGCTACGT GACCCGCTGTTCTATCTAGATACCCAGAAGGGCCGCTACGT < 41bp 0.443441219029685 0.834432617794902 0.16578805 0.39489263 prediction 0.668865235589805 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131122695 chr9:131122696 nonsynonymous SNV 0.218 0 22 hPsi_associated_SNPs_25674 0 0 1 0 1 Ribosome 0.439552527134598 0.438718634116885 0 0 hPsi_site_19398 iPseU_CNN:0;iRNA_PseU:0 19399 chr4 186180192 186180192 1 + C A UCEC 186180191 + 186180171 186180211 41 GAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCA GAGGACTTTACTCACTCATTTATGTGACCTGAAAGCTGCCA < 41bp 0.521555429338786 0.855980290894727 0.3647377 0.54484344 prediction 0.668849723111883 Functional Gain - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186180191 chr4:186180192 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25675 0 0 1 0 1 Endoplasmic reticulum 0.438718592463309 0.438718538104893 0.0896868799999999 0 hPsi_site_19399 iPseU_CNN:0.0896868799999999;iRNA_PseU:0 19400 chr20 23349524 23349524 1 + G A BLCA 23349523 + 23349503 23349543 41 GAAGTATGTTTCAGGACTTTTGCCCAGCGGAATTCACTGTA GAAGTATGTTTCAGGACTTTTACCCAGCGGAATTCACTGTA < 41bp 0.425255531268843 0.834423801535071 0.31407148 0.6392176 prediction 0.668847603070142 Functional Gain - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23349523 chr20:23349524 nonsynonymous SNV 0.841 3 22 hPsi_associated_SNPs_25676 0 0 1 0 1 Cytosol 0.438753135599398 0.438718686390741 0.2784352 0 hPsi_site_19400 iPseU_CNN:0.2784352;iRNA_PseU:0 19401 chr2 207827288 207827288 1 + C A UCEC 207827287 + 207827267 207827307 41 CACTCTTATGGGCAGTTAATTCTCACACCTTACGGCTACAC CACTCTTATGGGCAGTTAATTATCACACCTTACGGCTACAC < 41bp 0.481520196586681 0.834423296747681 0.2648006 0.35108355 prediction 0.668846593495363 Functional Gain - CPO ENSG00000144410 CDS Human protein_coding chr2:207827287 chr2:207827288 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_25677 0 0 0 0 1 exosome 0.438699275738359 0.438800010002315 0 0 hPsi_site_19401 iPseU_CNN:0;iRNA_PseU:0 19402 chr3 152880554 152880554 1 + G A LUAD 152880553 + 152880533 152880573 41 CGCGCTCACCGTGCAGTTCGTGACGGGCTCCTTCATCGAGA CGCGCTCACCGTGCAGTTCGTAACGGGCTCCTTCATCGAGA < 41bp 0.458842443286677 0.834422377180435 0.56673956 0.95110524 prediction 0.66884475436087 Functional Gain - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880553 chr3:152880554 synonymous SNV . 0 22 hPsi_associated_SNPs_25678 0 0 1 0 0 Ribosome 0.438718511366591 0.438718605074176 0.76873136 0 hPsi_site_19402 iPseU_CNN:0.76873136;iRNA_PseU:0 19403 chr13 41373296 41373296 1 + G T BRCA 41373297 - 41373277 41373317 41 GAAGCCCACCTGGGAGTAAGTCTTCAGGCAGCAGTCGGTGA GAAGCCCACCTGGGAGTAAGTATTCAGGCAGCAGTCGGTGA < 41bp 0.517941612688215 0.852362185147395 0.26415998 0.3910434 prediction 0.66884114491836 Functional Gain - SLC25A15 ENSG00000102743 CDS Human protein_coding chr13:41373297 chr13:41373296 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_25679 0 0 0 0 0 Ribosome 0.438718592856531 0.438718283579398 0 0 hPsi_site_19403 iPseU_CNN:0;iRNA_PseU:0 19404 chr3 156396214 156396214 1 + G A UCEC 156396213 + 156396193 156396233 41 AAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGC AAGAGAACGGAATTGAAATTTACATGGACTTTCTGCAAGGC < 41bp 0.552292893692306 0.886711646737756 0.4440288 0.75243175 prediction 0.668837506090901 Functional Gain - TIPARP ENSG00000163659 CDS Human protein_coding chr3:156396213 chr3:156396214 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25680 0 0 1 0 0 Nucleus 0.438719371170776 0.438718941340182 0.5048635 0 hPsi_site_19404 iPseU_CNN:0.5048635;iRNA_PseU:0 19405 chr6 126334226 126334226 1 + G A COAD 126334225 + 126334205 126334245 41 TAGGTGGAAGACTAGTCTATTGGTTACCGGTGTATACGCCA TAGGTGGAAGACTAGTCTATTAGTTACCGGTGTATACGCCA < 41bp 0.445966311620334 0.834406264106239 0.2200954 0.200961 prediction 0.668812528212478 Functional Gain - TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126334225 chr6:126334226 stopgain 1.000 1 22 hPsi_associated_SNPs_25681 0 0 1 0 0 Cytosol 0.438616005612188 0.438703191343464 0 0 hPsi_site_19405 iPseU_CNN:0;iRNA_PseU:0 19406 chr7 128497288 128497288 1 + G A HNSC 128497287 + 128497267 128497307 41 CGGGAGTGTCCTGAGGGCCATGTGGTCACTTATACTCCCAT CGGGAGTGTCCTGAGGGCCATATGGTCACTTATACTCCCAT < 41bp 0.549603597450464 0.88400705113166 0.21848917 0.24344069 prediction 0.668806907362393 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128497287 chr7:128497288 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_25682 0 0 1 0 0 chromatin 0.440499962099506 0.438548534609574 0 0 hPsi_site_19406 iPseU_CNN:0;iRNA_PseU:0 19407 chr1 248366730 248366730 1 + G A SKCM 248366729 + 248366709 248366749 41 CTTTTGGCTGTTATGGCTTATGACCGCTACACTGCCATTTG CTTTTGGCTGTTATGGCTTATAACCGCTACACTGCCATTTG < 41bp 0.455136011558805 0.834400463068683 0.22443327 0.546186 prediction 0.668800926137365 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248366729 chr1:248366730 nonsynonymous SNV 0.130 3 22 hPsi_associated_SNPs_25683 0 0 0 0 0 exosome 0.438718596149111 0.438715786971664 0.0923719999999999 0 hPsi_site_19407 iPseU_CNN:0.0923719999999999;iRNA_PseU:0 19408 chr20 44258473 44258473 1 + G A rs138335721 44258472 + 44258452 44258492 41 CATGGCACCCCAGACTCTGCTGCCTGTCCTGGTTCTCTGTG CATGGCACCCCAGACTCTGCTACCTGTCCTGGTTCTCTGTG < 41bp 0.555993344241154 0.890392850439822 0.22934806 0.39456844 prediction 0.668799012397336 Functional Gain - WFDC10A ENSG00000180305 CDS Human protein_coding chr20:44258472 chr20:44258473 synonymous SNV . 0 22 hPsi_associated_SNPs_25684 0 0 0 0 0 unknown 0.438722922833332 0.438839738191876 0 0 hPsi_site_19408 iPseU_CNN:0;iRNA_PseU:0 19409 chr10 70515282 70515282 1 + G A LUSC 70515281 + 70515261 70515301 41 GACAGGCATTGATCTAAGTGTGTGCACACAATGGTAAGTAC GACAGGCATTGATCTAAGTGTATGCACACAATGGTAAGTAC < 41bp 0.444164557141829 0.834393727985562 0.23751593 0.37404895 prediction 0.668787455971124 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70515281 chr10:70515282 synonymous SNV . 0 22 hPsi_associated_SNPs_25685 0 0 1 0 1 Nucleus 0.439774009395665 0.438845612983114 0 0 hPsi_site_19409 iPseU_CNN:0;iRNA_PseU:0 19410 chr4 110606485 110606485 1 + G A CESC 110606484 + 110606464 110606504 41 TCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTT TCAAAGCAACAGCACTTTGATATGCAGCAATACAACAAGTT < 41bp 0.538241445223428 0.872629058308897 0.27715802 0.40547425 prediction 0.668775226170939 Functional Gain - MCUB ENSG00000005059 CDS Human protein_coding chr4:110606484 chr4:110606485 nonsynonymous SNV 0.610 3 22 hPsi_associated_SNPs_25686 0 0 0 0 2 unknown 0.438906682217812 0.43872564646654 0 0 hPsi_site_19410 iPseU_CNN:0;iRNA_PseU:0 19411 chr11 123777582 123777582 1 + C A LUAD 123777581 + 123777561 123777601 41 TTCTCTGCTGGTGGCTGCTGTCTTCTCAGTAGGTTTCACTG TTCTCTGCTGGTGGCTGCTGTATTCTCAGTAGGTTTCACTG < 41bp 0.505119904134794 0.839506882187714 0.341624 0.47704387 prediction 0.66877395610584 Functional Gain - OR8D4 ENSG00000181518 CDS Human protein_coding chr11:123777581 chr11:123777582 synonymous SNV . 0 22 hPsi_associated_SNPs_25687 0 0 0 0 0 unknown 0.438718468416319 0.438715371423156 0 0 hPsi_site_19411 iPseU_CNN:0;iRNA_PseU:0 19412 chr1 201966668 201966668 1 + C A rs553497420 201966667 + 201966647 201966687 41 TGTACGCCCAGAGGAGGATCTCCACCATCCTCTTTGGTAAA TGTACGCCCAGAGGAGGATCTACACCATCCTCTTTGGTAAA < 41bp 0.527015877157605 0.861397025456625 0.31639314 0.7652661 prediction 0.668762296598041 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966667 chr1:201966668 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25688 0 0 1 0 1 Ribosome 0.438718592995101 0.438718238015598 0.5305322 0 hPsi_site_19412 iPseU_CNN:0.5305322;iRNA_PseU:0 19413 chr20 44526652 44526652 1 + G A STAD 44526651 + 44526631 44526671 41 CCTGGTGGGGCAGATGGAGGTGCAGCGCCGGCCCTGGTTAG CCTGGTGGGGCAGATGGAGGTACAGCGCCGGCCCTGGTTAG < 41bp 0.504557132515072 0.838936764102184 0.3439914 0.6817598 prediction 0.668759263174225 Functional Gain - CTSA ENSG00000064601 CDS Human protein_coding chr20:44526651 chr20:44526652 synonymous SNV . 0 22 hPsi_associated_SNPs_25689 0 0 1 0 2 Ribosome 0.43871046601474 0.438069444192485 0.3635196 0 hPsi_site_19413 iPseU_CNN:0.3635196;iRNA_PseU:0 19414 chr9 22451229 22451229 1 + G A rs34324424 22451228 + 22451208 22451248 41 CAACAAGCCTGATAGTATCCTGTCTCCTCATCCTGGAGAGC CAACAAGCCTGATAGTATCCTATCTCCTCATCCTGGAGAGC < 41bp 0.560336273379188 0.894715886441753 0.20774576 0.39981923 prediction 0.66875922612513 Functional Gain - DMRTA1 ENSG00000176399 CDS Human protein_coding chr9:22451228 chr9:22451229 synonymous SNV . 0 22 hPsi_associated_SNPs_25690 0 0 0 0 0 exosome 0.442713392177041 0.439451432803875 0 0 hPsi_site_19414 iPseU_CNN:0;iRNA_PseU:0 19415 chr5 145834796 145834796 1 + G A rs139296611 145834795 + 145834775 145834815 41 TGATCCTAATATGCCGCCAATGCCTCCTCCAGGAGGGATAC TGATCCTAATATGCCGCCAATACCTCCTCCAGGAGGGATAC < 41bp 0.436585100848175 0.834378095999911 0.28243008 0.44301227 prediction 0.668756191999822 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145834795 chr5:145834796 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25691 0 0 1 0 1 Nucleus 0.438718598676053 0.438718563346292 0 0 hPsi_site_19415 iPseU_CNN:0;iRNA_PseU:0 19416 chr11 71259993 71259993 1 + G A rs535053140 71259992 + 71259972 71260012 41 CAGGCTGTGGGTCATCCTGCTGCCAGTGCAGCTGCTGCAAG CAGGCTGTGGGTCATCCTGCTACCAGTGCAGCTGCTGCAAG < 41bp 0.551144994292176 0.885521185069654 0.34411454 0.7600874 prediction 0.668752381554957 Functional Gain - KRTAP5-9 ENSG00000254997 CDS Human protein_coding chr11:71259992 chr11:71259993 nonsynonymous SNV 0.092 1 22 hPsi_associated_SNPs_25692 0 0 0 0 0 exosome 0.438644597125981 0.439046679637511 0.5201748 0 hPsi_site_19416 iPseU_CNN:0.5201748;iRNA_PseU:0 19417 chr20 42979392 42979392 1 + G A STAD 42979391 + 42979371 42979411 41 GCAGCTGCAATAGCAACATGTGCTTCAAGGGGCTGAAATCC GCAGCTGCAATAGCAACATGTACTTCAAGGGGCTGAAATCC < 41bp 0.554035300617423 0.888405267311645 0.26613924 0.8909037 prediction 0.668739933388444 Functional Gain - R3HDML ENSG00000101074 CDS Human protein_coding chr20:42979391 chr20:42979392 nonsynonymous SNV 0.106 4 22 hPsi_associated_SNPs_25693 0 0 0 0 1 cytosol 0.438709489270647 0.438718830124159 0.7818074 0 hPsi_site_19417 iPseU_CNN:0.7818074;iRNA_PseU:0 19418 chr12 110906439 110906439 1 + C T THYM 110906440 - 110906420 110906460 41 TCACAGGAGGGAAATATACATGCTCCCCAAAACAAGAGGTG TCACAGGAGGGAAATATACATACTCCCCAAAACAAGAGGTG < 41bp 0.458746795040942 0.834363765858588 0.2654041 0.69086 prediction 0.668727531717175 Functional Gain - GPN3 ENSG00000111231 CDS Human protein_coding chr12:110906440 chr12:110906439 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_25694 0 0 0 0 0 Ribosome 0.438718587344342 0.438718592980497 0.38172 0 hPsi_site_19418 iPseU_CNN:0.38172;iRNA_PseU:0 19419 chr9 80943058 80943058 1 + C A UCEC 80943057 + 80943037 80943077 41 GATGCTTTAGAAAAAAGATTTCTTGATAAAGCTCTTGAACT GATGCTTTAGAAAAAAGATTTATTGATAAAGCTCTTGAACT < 41bp 0.503780036657805 0.838141245517859 0.380539 0.4253676 prediction 0.668722417720109 Functional Gain - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80943057 chr9:80943058 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25695 0 0 0 0 2 Ribosome 0.438018233804831 0.438816670445384 0 0 hPsi_site_19419 iPseU_CNN:0;iRNA_PseU:0 19420 chr9 107456942 107456942 1 + C A SARC 107456941 + 107456921 107456961 41 AAATAGCCTCCTCATTATCATCACCATCTTGGATTCTCGCC AAATAGCCTCCTCATTATCATAACCATCTTGGATTCTCGCC < 41bp 0.498699081844669 0.834353929695874 0.27741092 0.344558 prediction 0.668707859391748 Functional Gain - OR13D1 ENSG00000179055 CDS Human protein_coding chr9:107456941 chr9:107456942 synonymous SNV . 0 22 hPsi_associated_SNPs_25696 0 0 0 0 0 unknown 0.438718592678394 0.438718592627989 0 0 hPsi_site_19420 iPseU_CNN:0;iRNA_PseU:0 19421 chr4 115544764 115544764 1 + G A UCEC 115544763 + 115544743 115544783 41 GGTCCAGCCTGTGGATGCTGTGTACTGACGTAGCACTGGAA GGTCCAGCCTGTGGATGCTGTATACTGACGTAGCACTGGAA < 41bp 0.562833041497236 0.897186702758838 0.2951157 0.56589985 prediction 0.668707322523204 Functional Gain - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544763 chr4:115544764 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_25697 0 0 0 1 1 Ribosome 0.43893483932302 0.43873411300681 0.1317997 0 hPsi_site_19421 iPseU_CNN:0.1317997;iRNA_PseU:0 19422 chr14 22090685 22090685 1 + G A SKCM 22090684 + 22090664 22090704 41 CCTTCTACAGGAGCTCCAGATGAAAGACTCTGCCTCTTACT CCTTCTACAGGAGCTCCAGATAAAAGACTCTGCCTCTTACT < 41bp 0.503134160902589 0.837486188526148 0.23737624 0.26758635 prediction 0.668704055247118 Functional Gain - OR10G3;OR10G2 ENSG00000255569 CDS Human TR_V_gene chr14:22090684 chr14:22090685 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25698 0 0 0 0 0 unknown 0.438713437473028 0.438699801031049 0 0 hPsi_site_19422 iPseU_CNN:0;iRNA_PseU:0 19423 chr3 112066436 112066436 1 + C A COAD 112066435 + 112066415 112066455 41 AGTATCCCTTCACTACAAATTCTCTGAAGACCACCTAAATA AGTATCCCTTCACTACAAATTATCTGAAGACCACCTAAATA < 41bp 0.526465136594471 0.860811100111981 0.37669912 0.6298256 prediction 0.66869192703502 Functional Gain - CD200 ENSG00000091972 CDS Human protein_coding chr3:112066435 chr3:112066436 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_25699 0 0 0 0 2 Endoplasmic reticulum 0.438718601166124 0.438718265959152 0.2596512 0 hPsi_site_19423 iPseU_CNN:0.2596512;iRNA_PseU:0 19424 chr4 1388882 1388882 1 + G A STAD 1388881 + 1388861 1388901 41 CGCCTGATCACACGTGCCCATGTGGAGTGCTCGCCTGCTCA CGCCTGATCACACGTGCCCATATGGAGTGCTCGCCTGCTCA < 41bp 0.531014822505018 0.865357862606698 0.30981922 0.35947484 prediction 0.66868608020336 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388881 chr4:1388882 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25700 0 0 0 0 0 chromatin 0.438708277357634 0.438718416098469 0 0 hPsi_site_19424 iPseU_CNN:0;iRNA_PseU:0 19425 chr7 37927976 37927976 1 + C A UCEC 37927975 + 37927955 37927995 41 AGGGAAATACAGCATTTCTTTCCTCTTCAAAGCACTTTAGG AGGGAAATACAGCATTTCTTTACTCTTCAAAGCACTTTAGG < 41bp 0.519648054662148 0.853986326553811 0.24112847 0.61012435 prediction 0.668676543783326 Functional Gain - NME8 ENSG00000086288 CDS Human protein_coding chr7:37927975 chr7:37927976 nonsynonymous SNV 0.762 4 22 hPsi_associated_SNPs_25701 0 0 0 0 2 exosome 0.438718567751505 0.438744189116937 0.2202487 0 hPsi_site_19425 iPseU_CNN:0.2202487;iRNA_PseU:0 19426 chr14 59113078 59113078 1 + G A SKCM 59113077 + 59113057 59113097 41 CCACAGGAACATGGGCGTCGTGAAGAACTCCAGCCTGAAGC CCACAGGAACATGGGCGTCGTAAAGAACTCCAGCCTGAAGC < 41bp 0.423400488927148 0.834334921322524 0.20031214 0.39240184 prediction 0.668669842645048 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113077 chr14:59113078 synonymous SNV . 0 22 hPsi_associated_SNPs_25702 0 0 0 0 0 exosome 0.438718610989978 0.438718499979556 0 0 hPsi_site_19426 iPseU_CNN:0;iRNA_PseU:0 19427 chr6 7605654 7605654 1 + G A COAD 7605653 + 7605633 7605673 41 GATTCGAGATGTGATAAATGTGCACATGGAAGAACTCAGCA GATTCGAGATGTGATAAATGTACACATGGAAGAACTCAGCA < 41bp 0.441088957400503 0.834332682398349 0.23237771 0.43733925 prediction 0.668665364796698 Functional Gain - SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7605653 chr6:7605654 synonymous SNV . 0 22 hPsi_associated_SNPs_25703 0 0 1 0 2 Ribosome 0.438738108857255 0.438718630076116 0 0 hPsi_site_19427 iPseU_CNN:0;iRNA_PseU:0 19428 chr11 63986815 63986815 1 + G A UCEC 63986814 + 63986794 63986834 41 CACCGAGGAGGAGATGATGGTGTTTGCCGCCCTGCAGGTAC CACCGAGGAGGAGATGATGGTATTTGCCGCCCTGCAGGTAC < 41bp 0.566601919254308 0.900932066126037 0.46666443 0.8178939 prediction 0.668660293743459 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63986814 chr11:63986815 synonymous SNV . 0 22 hPsi_associated_SNPs_25704 0 0 1 0 2 Cytosol 0.438718778132066 0.43871852446185 0.6357878 0 hPsi_site_19428 iPseU_CNN:0.6357878;iRNA_PseU:0 19429 chr11 61897770 61897770 1 + C A KIRC 61897769 + 61897749 61897789 41 GGGGCGGTCTGCGTCTAAGCTCAGGATTGCGCAGGTCTCCC GGGGCGGTCTGCGTCTAAGCTAAGGATTGCGCAGGTCTCCC < 41bp 0.529572767709928 0.863899556770438 0.25569645 0.33464712 prediction 0.668653578121021 Functional Gain - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897769 chr11:61897770 synonymous SNV . 0 22 hPsi_associated_SNPs_25705 0 0 1 0 0 chromatin 0.438485929636455 0.438716487892582 0 0 hPsi_site_19429 iPseU_CNN:0;iRNA_PseU:0 19430 chr8 103572746 103572746 1 + G A UCEC 103572745 + 103572725 103572765 41 CAGTAACATTTTAGGATCGGTGAATGTATGCGGTTTTGAAC CAGTAACATTTTAGGATCGGTAAATGTATGCGGTTTTGAAC < 41bp 0.446758750053118 0.834324163726676 0.26298434 0.46668363 prediction 0.668648327453352 Functional Gain - ODF1 ENSG00000155087 CDS Human protein_coding chr8:103572745 chr8:103572746 synonymous SNV . 0 22 hPsi_associated_SNPs_25706 0 0 0 0 1 unknown 0.438707884305683 0.438550312438838 0 0 hPsi_site_19430 iPseU_CNN:0;iRNA_PseU:0 19431 chr12 6838559 6838559 1 + C A rs149356254 6838558 + 6838538 6838578 41 GCTCGAGGTTGACTACAGCATCGGGCGGGACATCCAGCGCC GCTCGAGGTTGACTACAGCATAGGGCGGGACATCCAGCGCC < 41bp 0.469945616093167 0.834323023725414 0.24666813 0.28267395 prediction 0.668646047450828 Functional Gain - COPS7A ENSG00000111652 CDS Human protein_coding chr12:6838558 chr12:6838559 synonymous SNV . 0 22 hPsi_associated_SNPs_25707 0 0 1 0 1 Cytosol 0.438849403826269 0.442547442251008 0 0 hPsi_site_19431 iPseU_CNN:0;iRNA_PseU:0 19432 chr14 24629542 24629542 1 + G A LUAD 24629541 + 24629521 24629561 41 GAAGAGCTGGAGACGGCCACTGAGCGCTACCTGCACGTACG GAAGAGCTGGAGACGGCCACTAAGCGCTACCTGCACGTACG < 41bp 0.427308975195727 0.834322464448675 0.24832779 0.4576567 prediction 0.668644928897349 Functional Gain - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24629541 chr14:24629542 nonsynonymous SNV 0.919 0 22 hPsi_associated_SNPs_25708 0 0 1 0 2 Ribosome 0.438740480054967 0.438718584685372 0 0 hPsi_site_19432 iPseU_CNN:0;iRNA_PseU:0 19433 chr1 36645920 36645920 1 + G A rs372794069 36645919 + 36645899 36645939 41 CTCTGCATCACCTACCAGGATGTCTGGAGGAGAAAAAGACA CTCTGCATCACCTACCAGGATATCTGGAGGAGAAAAAGACA < 41bp 0.542158783087529 0.876475978638011 0.23136833 0.39413846 prediction 0.668634391100965 Functional Gain - MAP7D1 ENSG00000116871 UTR3 Human protein_coding chr1:36645919 chr1:36645920 . . 0 22 hPsi_associated_SNPs_25709 0 0 1 0 1 Ribosome 0.438718813563789 0.438718595610209 0 0 hPsi_site_19433 iPseU_CNN:0;iRNA_PseU:0 19434 chr3 178952003 178952003 1 + G A UCEC 178952002 + 178951982 178952022 41 CTACAATCTTTTGATGACATTGCATACATTCGAAAGACCCT CTACAATCTTTTGATGACATTACATACATTCGAAAGACCCT < 41bp 0.45744170416097 0.834309271627549 0.21237281 0.42436445 prediction 0.668618543255098 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178952002 chr3:178952003 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25710 0 0 1 0 0 Ribosome 0.43816260930579 0.438670452259303 0 0 hPsi_site_19434 iPseU_CNN:0;iRNA_PseU:0 19435 chr6 3850489 3850489 1 + G A SKCM 3850488 + 3850468 3850508 41 CCTGGGCAAGAACCCCGACGTGGACACCAGCTTCCTGCCAG CCTGGGCAAGAACCCCGACGTAGACACCAGCTTCCTGCCAG < 41bp 0.556881386560295 0.891190305559013 0.39906654 0.7684437 prediction 0.668617837997436 Functional Gain - FAM50B ENSG00000145945 CDS Human protein_coding chr6:3850488 chr6:3850489 synonymous SNV . 0 22 hPsi_associated_SNPs_25711 0 0 1 0 0 exosome 0.438718593126704 0.438718593039997 0.5368874 0 hPsi_site_19435 iPseU_CNN:0.5368874;iRNA_PseU:0 19436 chr3 178917576 178917576 1 + G A BLCA 178917575 + 178917555 178917595 41 CTGAACGTTTGTAAAGAAGCTGTGGATCTTAGGGACCTCAA CTGAACGTTTGTAAAGAAGCTATGGATCTTAGGGACCTCAA < 41bp 0.440613527456522 0.834302584613628 0.2711314 0.3189682 prediction 0.668605169227256 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178917575 chr3:178917576 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25712 0 0 1 0 1 Ribosome 0.438718592938554 0.438718591787057 0 0 hPsi_site_19436 iPseU_CNN:0;iRNA_PseU:0 19437 chr3 126736395 126736395 1 + C A BLCA 126736394 + 126736374 126736414 41 TCGTCATGGACAACGTGCGCTCCCTGCTTGTGCTCAACTCC TCGTCATGGACAACGTGCGCTACCTGCTTGTGCTCAACTCC < 41bp 0.480147728625147 0.834281695797544 0.3340127 0.8535811 prediction 0.668563391595089 Functional Gain - PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126736394 chr3:126736395 nonsynonymous SNV 0.483 1 22 hPsi_associated_SNPs_25713 0 0 1 0 0 Ribosome 0.438718823867422 0.439889120007406 0.7071622 0 hPsi_site_19437 iPseU_CNN:0.7071622;iRNA_PseU:0 19438 chr12 51090911 51090911 1 + C A BLCA 51090910 + 51090890 51090930 41 TGGACTGAAGCCTGAGGCCATCTGTCCGTGCGCCACGTCTG TGGACTGAAGCCTGAGGCCATATGTCCGTGCGCCACGTCTG < 41bp 0.475857228770087 0.834277045539821 0.19557673 0.23507282 prediction 0.668554091079643 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51090910 chr12:51090911 synonymous SNV . 0 22 hPsi_associated_SNPs_25714 0 0 1 0 1 Nucleus 0.438757333431152 0.437939047966778 0 0 hPsi_site_19438 iPseU_CNN:0;iRNA_PseU:0 19439 chr22 31674980 31674980 1 + G A rs73394338 31674979 + 31674959 31674999 41 AAGGTTGAGGGAGTAGGTTTTGAAGAGTCCCTTAATATGTG AAGGTTGAGGGAGTAGGTTTTAAAGAGTCCCTTAATATGTG < 41bp 0.452669998895286 0.834274906368278 0.2823568 0.56128025 prediction 0.668549812736556 Functional Gain - LIMK2 ENSG00000182541 UTR3 Human protein_coding chr22:31674979 chr22:31674980 . . 0 22 hPsi_associated_SNPs_25715 0 0 1 0 0 Cytosol 0.438718263826822 0.438721581912742 0.1225605 0 hPsi_site_19439 iPseU_CNN:0.1225605;iRNA_PseU:0 19440 chr22 21363477 21363477 1 + G A rs367834403 21363476 + 21363456 21363496 41 GACACTCGATGTCCAGGTTGTGCTGACATGTCATAGGTGGC GACACTCGATGTCCAGGTTGTACTGACATGTCATAGGTGGC < 41bp 0.547722823358899 0.881994954563955 0.29570085 0.7252949 prediction 0.668544262410112 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363476 chr22:21363477 . . 0 22 hPsi_associated_SNPs_25716 0 0 0 0 0 unknown 0.432802988666973 0.437131043110631 0.4505898 0 hPsi_site_19440 iPseU_CNN:0.4505898;iRNA_PseU:0 19441 chr18 670782 670782 1 + C A LUAD 670781 + 670761 670801 41 CCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTCGGT CCTGCCAGCTGTACCAGAGATAGGGAGACATGGGCCTCGGT < 41bp 0.46836654707747 0.834270169823058 0.22633016 0.3958471 prediction 0.668540339646116 Functional Gain - TYMS ENSG00000176890 CDS Human protein_coding chr18:670781 chr18:670782 stopgain 0.988 1 22 hPsi_associated_SNPs_25717 0 0 1 0 2 Ribosome 0.438581282070827 0.438729217635577 0 0 hPsi_site_19441 iPseU_CNN:0;iRNA_PseU:0 19442 chr20 11903518 11903518 1 + C A HNSC 11903517 + 11903497 11903537 41 AGGCTGAGTTAGCTCTCAAGTCTGAGGGATTCTGCGATATT AGGCTGAGTTAGCTCTCAAGTATGAGGGATTCTGCGATATT < 41bp 0.517668613854172 0.851934537697607 0.22124335 0.5101157 prediction 0.668531847686871 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903517 chr20:11903518 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25718 0 0 1 0 0 Cytosol 0.438705049961018 0.438718501957605 0.0202313999999999 0 hPsi_site_19442 iPseU_CNN:0.0202313999999999;iRNA_PseU:0 19443 chr2 121050722 121050722 1 + C A LUSC 121050721 + 121050701 121050741 41 TACTCCTCACCCCCAGGTGTTCTTTGACCTAATGAGAGAAA TACTCCTCACCCCCAGGTGTTATTTGACCTAATGAGAGAAA < 41bp 0.503428517091318 0.837678509196003 0.34829354 0.45181462 prediction 0.668499984209371 Functional Gain - RALB ENSG00000144118 CDS Human protein_coding chr2:121050721 chr2:121050722 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25719 0 0 1 0 1 Ribosome 0.438718592995102 0.438718593054317 0 0 hPsi_site_19443 iPseU_CNN:0;iRNA_PseU:0 19444 chr8 99168334 99168334 1 + G A STAD 99168333 + 99168313 99168353 41 TTGGCACTCTGGCACCTTTCTGCTGTCCCTGGGAGCAGTTA TTGGCACTCTGGCACCTTTCTACTGTCCCTGGGAGCAGTTA < 41bp 0.414734562716872 0.834247333147539 0.3423002 0.567683 prediction 0.668494666295078 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99168333 chr8:99168334 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_25720 0 0 1 0 1 Mitochondrion 0.43871859299511 0.438718594218667 0.135366 0 hPsi_site_19444 iPseU_CNN:0.135366;iRNA_PseU:0 19445 chr1 110033563 110033563 1 + G A HNSC 110033562 + 110033542 110033582 41 AGGAAGATCCCACCGGCAGCTGAACCTCCAGCTCACCTTGT AGGAAGATCCCACCGGCAGCTAAACCTCCAGCTCACCTTGT < 41bp 0.561784807588598 0.896031239185989 0.28007096 0.538004 prediction 0.668492863194781 Functional Gain - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110033562 chr1:110033563 nonsynonymous SNV 0.648 3 22 hPsi_associated_SNPs_25721 0 0 0 0 1 nucleoplasm 0.43868074668396 0.438717931375798 0.0760080000000001 0 hPsi_site_19445 iPseU_CNN:0.0760080000000001;iRNA_PseU:0 19446 chr15 63597890 63597890 1 + C A rs200671857 63597889 + 63597869 63597909 41 GCTCATGGGCACCTGGGCATTCTTAGCTGCGGGAGGCAGCT GCTCATGGGCACCTGGGCATTATTAGCTGCGGGAGGCAGCT < 41bp 0.508807686463836 0.84305104158214 0.40918502 0.5810186 prediction 0.668486710236608 Functional Gain - APH1B ENSG00000138613 CDS Human protein_coding chr15:63597889 chr15:63597890 nonsynonymous SNV 0.362 3 22 hPsi_associated_SNPs_25722 0 0 0 0 1 Endoplasmic reticulum 0.438716546309756 0.43871844591344 0.1620372 0 hPsi_site_19446 iPseU_CNN:0.1620372;iRNA_PseU:0 19447 chr15 41554976 41554976 1 + G A GBM 41554975 + 41554955 41554995 41 GAGGACCAGGTAAACTTCCGTGGATTCATGCGAACTTTGGC GAGGACCAGGTAAACTTCCGTAGATTCATGCGAACTTTGGC < 41bp 0.426608127188449 0.834236707498564 0.19626066 0.65558934 prediction 0.668473414997129 Functional Gain - CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554975 chr15:41554976 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25723 0 0 1 0 1 Ribosome 0.438730935096665 0.438718547138054 0.31117868 0 hPsi_site_19447 iPseU_CNN:0.31117868;iRNA_PseU:0 19448 chr1 180910411 180910411 1 + C A STAD 180910410 + 180910390 180910430 41 CCAGGGCCCCATCGTTACAATCCCTGCACCCGGTGAGTCCA CCAGGGCCCCATCGTTACAATACCTGCACCCGGTGAGTCCA < 41bp 0.487254529045799 0.834230775934696 0.2286183 0.66566706 prediction 0.668461551869392 Functional Gain - KIAA1614 ENSG00000135835 CDS Human protein_coding chr1:180910410 chr1:180910411 nonsynonymous SNV 0.958 3 22 hPsi_associated_SNPs_25724 0 0 0 0 1 nucleus 0.438718592995083 0.438719287918623 0.33133412 0 hPsi_site_19448 iPseU_CNN:0.33133412;iRNA_PseU:0 19449 chr8 110131635 110131635 1 + C A UCEC 110131634 + 110131614 110131654 41 ACCTGTCTGCCACAAAAGTGTCTTTTGATGACACCTGCTTG ACCTGTCTGCCACAAAAGTGTATTTTGATGACACCTGCTTG < 41bp 0.487743208871931 0.834220464194842 0.23047766 0.45540568 prediction 0.668440928389684 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110131634 chr8:110131635 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_25725 0 0 0 0 0 exosome 0.437596632761478 0.437319662805961 0 0 hPsi_site_19449 iPseU_CNN:0;iRNA_PseU:0 19450 chr14 68191196 68191196 1 + C A UCEC 68191195 + 68191175 68191215 41 TTCCCTTGCCGATAGGAAGTTCTTTGCTGGTGGAGTGTGTA TTCCCTTGCCGATAGGAAGTTATTTGCTGGTGGAGTGTGTA < 41bp 0.510142246619627 0.844359257665617 0.33226025 0.6296686 prediction 0.668434022091979 Functional Gain - RDH12 ENSG00000139988 CDS Human protein_coding chr14:68191195 chr14:68191196 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25726 0 0 0 0 1 exosome 0.438718592929581 0.438718586180022 0.2593372 0 hPsi_site_19450 iPseU_CNN:0.2593372;iRNA_PseU:0 19451 chr4 37962529 37962529 1 + G A rs138267785 37962528 + 37962508 37962548 41 GGAGGGAGAGCTTGAAAAGCTGTTTCAGCTGGGCCCCCCTT GGAGGGAGAGCTTGAAAAGCTATTTCAGCTGGGCCCCCCTT < 41bp 0.539536248874416 0.87375255684754 0.41818303 0.535956 prediction 0.668432615946248 Functional Gain - PTTG2 ENSG00000250254 CDS Human protein_coding chr4:37962528 chr4:37962529 synonymous SNV . 0 22 hPsi_associated_SNPs_25727 0 0 0 0 0 exosome 0.438718593708507 0.438718592993193 0.071912 0 hPsi_site_19451 iPseU_CNN:0.071912;iRNA_PseU:0 19452 chr17 47241572 47241572 1 + G A UCEC 47241571 + 47241551 47241591 41 TTGACCGTAATAGTGGCTGATGACAGCCAGAAGCCCCTGGA TTGACCGTAATAGTGGCTGATAACAGCCAGAAGCCCCTGGA < 41bp 0.421651955152473 0.83421338150698 0.15020412 0.22294292 prediction 0.66842676301396 Functional Gain - B4GALNT2 ENSG00000167080 CDS Human protein_coding chr17:47241571 chr17:47241572 nonsynonymous SNV 0.103 4 22 hPsi_associated_SNPs_25728 0 0 0 0 1 nucleolus 0.438718566947384 0.438718593743907 0 0 hPsi_site_19452 iPseU_CNN:0;iRNA_PseU:0 19453 chr17 17250164 17250164 1 + G A LGG 17250163 + 17250143 17250183 41 AGCATGTCCTCTTCACCGCCTGCCACAACCAGCACCTGCAG AGCATGTCCTCTTCACCGCCTACCACAACCAGCACCTGCAG < 41bp 0.547893924026985 0.88210697004327 0.34655815 0.68007886 prediction 0.66842609203257 Functional Gain - NT5M ENSG00000205309 CDS Human protein_coding chr17:17250163 chr17:17250164 nonsynonymous SNV 0.911 0 22 hPsi_associated_SNPs_25729 0 0 0 0 1 Cytosol 0.442113504109336 0.445446625613644 0.36015772 0 hPsi_site_19453 iPseU_CNN:0.36015772;iRNA_PseU:0 19454 chr19 14029367 14029367 1 + C A STAD 14029366 + 14029346 14029386 41 CCGGGGTGAGCCCGTGGACCTCTCCTGCCTGCCCCCTCCAC CCGGGGTGAGCCCGTGGACCTATCCTGCCTGCCCCCTCCAC < 41bp 0.535978071351038 0.870189028527097 0.31526792 0.74367815 prediction 0.668421914352117 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14029366 chr19:14029367 synonymous SNV . 0 22 hPsi_associated_SNPs_25730 0 0 1 0 1 chromatin 0.438709153893657 0.438887359819705 0.4873563 0 hPsi_site_19454 iPseU_CNN:0.4873563;iRNA_PseU:0 19455 chr3 186917761 186917761 1 + C A COAD 186917760 + 186917740 186917780 41 AGTCGCAGGACCAGACGGGCTCAGGCTGGAACTTCTGCTCT AGTCGCAGGACCAGACGGGCTAAGGCTGGAACTTCTGCTCT < 41bp 0.477525133510394 0.834210177214986 0.15252131 0.32171947 prediction 0.668420354429972 Functional Gain - RTP1 ENSG00000175077 CDS Human protein_coding chr3:186917760 chr3:186917761 stopgain 0.983 0 22 hPsi_associated_SNPs_25731 0 0 0 0 0 exosome 0.438733418577896 0.438720274581516 0 0 hPsi_site_19455 iPseU_CNN:0;iRNA_PseU:0 19456 chr6 25726383 25726383 1 + G A CESC 25726382 + 25726362 25726402 41 ACTTGCTTTGGGCTTTATGGTGGTGACTCTCAGTCTTCTTG ACTTGCTTTGGGCTTTATGGTAGTGACTCTCAGTCTTCTTG < 41bp 0.462048998739543 0.834205668581194 0.28950557 0.55603564 prediction 0.668411337162387 Functional Gain - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726382 chr6:25726383 nonsynonymous SNV 0.653 1 22 hPsi_associated_SNPs_25732 0 0 0 0 0 unknown 0.438718547557853 0.438678749873764 0.11207128 0 hPsi_site_19456 iPseU_CNN:0.11207128;iRNA_PseU:0 19457 chr12 57843146 57843146 1 + C A LAML 57843145 + 57843125 57843165 41 AGGGAGGTCCAGCAGGCCAGTCTCATGTTCTTTGTGCAGCT AGGGAGGTCCAGCAGGCCAGTATCATGTTCTTTGTGCAGCT < 41bp 0.479728178461042 0.834198099691616 0.70083857 0.8864399 prediction 0.668396199383232 Functional Gain - INHBC ENSG00000175189 CDS Human protein_coding chr12:57843145 chr12:57843146 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_25733 0 0 0 0 1 exosome 0.43872168808017 0.438718548587292 0.37120266 0 hPsi_site_19457 iPseU_CNN:0.37120266;iRNA_PseU:0 19458 chr11 1619366 1619366 1 + C T LIHC 1619367 - 1619347 1619387 41 GGCTCCGGCCGTGGGGGCTGTGGCTCTGGCTGTGGGGGCTG GGCTCCGGCCGTGGGGGCTGTAGCTCTGGCTGTGGGGGCTG < 41bp 0.448795104415732 0.834193819586939 0.18560496 0.75895417 prediction 0.668387639173879 Functional Gain - KRTAP5-2 ENSG00000205867 CDS Human protein_coding chr11:1619367 chr11:1619366 nonsynonymous SNV 0.616 0 22 hPsi_associated_SNPs_25734 0 0 0 0 0 exosome 0.438718594326995 0.438718592104733 0.51790834 0 hPsi_site_19458 iPseU_CNN:0.51790834;iRNA_PseU:0 19459 chr3 178921533 178921533 1 + C A CESC 178921532 + 178921512 178921552 41 AGTGCACTCAGAATAAAAATTCTTTGTGCAACCTACGTGAA AGTGCACTCAGAATAAAAATTATTTGTGCAACCTACGTGAA < 41bp 0.495093908976194 0.834193212872405 0.47789866 0.59502614 prediction 0.668386425744811 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178921532 chr3:178921533 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25735 0 0 0 0 1 Ribosome 0.438690422042479 0.438817668904898 0.19005228 0 hPsi_site_19459 iPseU_CNN:0.19005228;iRNA_PseU:0 19460 chr4 71555443 71555443 1 + C A UCEC 71555442 + 71555422 71555462 41 CCACCAAGCCCAAACCAAAGTCTGTTTCAAAGACTTCTGCT CCACCAAGCCCAAACCAAAGTATGTTTCAAAGACTTCTGCT < 41bp 0.490146113145538 0.834192510249864 0.26550925 0.37519953 prediction 0.668385020499728 Functional Gain - UTP3 ENSG00000132467 CDS Human protein_coding chr4:71555442 chr4:71555443 nonsynonymous SNV 0.568 1 22 hPsi_associated_SNPs_25736 0 0 1 0 0 Cytosol 0.439023119453278 0.438718142170239 0 0 hPsi_site_19460 iPseU_CNN:0;iRNA_PseU:0 19461 chr11 5020735 5020735 1 + G A UCEC 5020734 + 5020714 5020754 41 TATCACTACTGCCATGGCAATGCCCTCTCTCACGCCTTCTG TATCACTACTGCCATGGCAATACCCTCTCTCACGCCTTCTG < 41bp 0.544183788548077 0.878366605816208 0.21698412 0.4673286 prediction 0.668365634536262 Functional Gain - OR51L1 ENSG00000176798 CDS Human protein_coding chr11:5020734 chr11:5020735 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25737 0 0 0 0 0 unknown 0.440954084496399 0.443288236003911 0 0 hPsi_site_19461 iPseU_CNN:0;iRNA_PseU:0 19462 chr19 34685448 34685448 1 + G A LGG 34685447 + 34685427 34685467 41 CCACCTCGAGATGAAGTCTTTGAATACATTATATTCCGTGG CCACCTCGAGATGAAGTCTTTAAATACATTATATTCCGTGG < 41bp 0.456659148548857 0.834181214560998 0.19288573 0.23643154 prediction 0.668362429121996 Functional Gain - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34685447 chr19:34685448 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25738 0 0 1 0 2 Cytosol 0.438718536746483 0.438718591643644 0 0 hPsi_site_19462 iPseU_CNN:0;iRNA_PseU:0 19463 chr17 65026687 65026687 1 + C A UCEC 65026686 + 65026666 65026706 41 ACCATTACAACTACGGCTGGTCTTTTTACTTTGGAGCTCTG ACCATTACAACTACGGCTGGTATTTTTACTTTGGAGCTCTG < 41bp 0.488859205175458 0.834172086631241 0.19000444 0.25958157 prediction 0.668344173262482 Functional Gain - CACNG4 ENSG00000075461 CDS Human protein_coding chr17:65026686 chr17:65026687 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_25739 0 0 0 0 0 Endoplasmic reticulum 0.438718123381017 0.438720146301363 0 0 hPsi_site_19463 iPseU_CNN:0;iRNA_PseU:0 19464 chr2 239140780 239140780 1 + G A rs114125804 239140779 + 239140759 239140799 41 GATAACAAAAGAAAAATGGGTGAGACAGAAGCTTCATCAGC GATAACAAAAGAAAAATGGGTAAGACAGAAGCTTCATCAGC < 41bp 0.464967260274357 0.834172009627621 0.2672183 0.6330173 prediction 0.668344019255242 Functional Gain - LOC643387 ENSG00000225057 ncRNA_exonic Human processed_transcript chr2:239140779 chr2:239140780 . . 0 22 hPsi_associated_SNPs_25740 0 0 0 0 0 unknown 0.439233041021709 0.438709123828437 0.2660346 0 hPsi_site_19464 iPseU_CNN:0.2660346;iRNA_PseU:0 19465 chr3 49692929 49692929 1 + G A rs149263435 49692928 + 49692908 49692948 41 ACAAGGCCTGCCTGGTAGGCTGTACTCCTCCATGTCTGACA ACAAGGCCTGCCTGGTAGGCTATACTCCTCCATGTCTGACA < 41bp 0.458791815740408 0.834170044653191 0.73669755 0.9124423 prediction 0.668340089306382 Functional Gain - BSN ENSG00000164061 CDS Human protein_coding chr3:49692928 chr3:49692929 synonymous SNV . 0 22 hPsi_associated_SNPs_25741 0 0 0 0 0 chromatin 0.438715621725716 0.438664611194419 0.3514895 0 hPsi_site_19465 iPseU_CNN:0.3514895;iRNA_PseU:0 19466 chr8 126370020 126370020 1 + C A PAAD 126370019 + 126369999 126370039 41 TATGAAGAGGACGCCATTGTTCGCATGATTGAGTCCAGGCA TATGAAGAGGACGCCATTGTTAGCATGATTGAGTCCAGGCA < 41bp 0.500893579250284 0.835057834023318 0.41277948 0.467385 prediction 0.668328509546067 Functional Gain - NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126370019 chr8:126370020 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_25742 0 0 1 0 2 Cytosol 0.438760932744502 0.438753686388121 0 0 hPsi_site_19466 iPseU_CNN:0;iRNA_PseU:0 19467 chr1 24840908 24840908 1 + C A UCEC 24840907 + 24840887 24840927 41 TGGAATGATAGCCAGTCAGATCTGTGTAGCACTGACCAAGA TGGAATGATAGCCAGTCAGATATGTGTAGCACTGACCAAGA < 41bp 0.485734460506151 0.834159804903159 0.345792 0.6622118 prediction 0.668319609806319 Functional Gain - RCAN3 ENSG00000117602 CDS Human protein_coding chr1:24840907 chr1:24840908 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_25743 0 0 0 0 0 exosome 0.438731104374746 0.437906826628059 0.3244236 0 hPsi_site_19467 iPseU_CNN:0.3244236;iRNA_PseU:0 19468 chr2 95537570 95537570 1 + C T BLCA 95537571 - 95537551 95537591 41 GCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGG GCGCGTGGAGTCTTGCTGCGTACGCTGCGCCAGCGCCTGGG < 41bp 0.555042821916807 0.889188062432325 0.33478937 0.7967876 prediction 0.668290481031036 Functional Gain - TEKT4 ENSG00000163060 CDS Human protein_coding chr2:95537571 chr2:95537570 synonymous SNV . 0 22 hPsi_associated_SNPs_25744 0 0 1 0 0 chromatin 0.438813952841115 0.438626159250857 0.5935752 0 hPsi_site_19468 iPseU_CNN:0.5935752;iRNA_PseU:0 19469 chr1 22925421 22925421 1 + G A UCEC 22925420 + 22925400 22925440 41 TACCTCTCAGACCTGGGCTATGTCCACCGAGACCTGGCCGC TACCTCTCAGACCTGGGCTATATCCACCGAGACCTGGCCGC < 41bp 0.420782161757905 0.834144385735674 0.37845045 0.64737195 prediction 0.668288771471347 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22925420 chr1:22925421 nonsynonymous SNV 0.932 1 22 hPsi_associated_SNPs_25745 0 0 0 0 1 exosome 0.438718592991575 0.43871859295116 0.2947439 0 hPsi_site_19469 iPseU_CNN:0.2947439;iRNA_PseU:0 19470 chr15 72691103 72691103 1 + G A LUSC 72691102 + 72691082 72691122 41 GAACGCTCTGTGGCAGCCTCTGTAGTTTTAGCCTCCTAATG GAACGCTCTGTGGCAGCCTCTATAGTTTTAGCCTCCTAATG < 41bp 0.422452939107997 0.834141604708383 0.5704819 0.5816975 prediction 0.668283209416766 Functional Gain - TMEM202 ENSG00000187806 CDS Human protein_coding chr15:72691102 chr15:72691103 nonsynonymous SNV 0.011 2 22 hPsi_associated_SNPs_25746 0 0 0 0 0 unknown 0.438718597870688 0.438718592388823 0.0224312 0 hPsi_site_19470 iPseU_CNN:0.0224312;iRNA_PseU:0 19471 chr16 88688722 88688722 1 + G A rs528741601 88688721 + 88688701 88688741 41 TCCCAAGAAGAAACTCGGGGTGTCGGTCTCCCCGAGCCGGG TCCCAAGAAGAAACTCGGGGTATCGGTCTCCCCGAGCCGGG < 41bp 0.572589808396537 0.906728237623147 0.4745995 0.8073819 prediction 0.668276858453221 Functional Gain - ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88688721 chr16:88688722 synonymous SNV . 0 22 hPsi_associated_SNPs_25747 0 0 1 0 1 chromatin 0.438692122050551 0.43812401191919 0.6147638 0 hPsi_site_19471 iPseU_CNN:0.6147638;iRNA_PseU:0 19472 chrX 47101883 47101883 1 + G A UCEC 47101882 + 47101862 47101902 41 GGCAAGATCTCGGATCTATGTGTGGCTCTGTCCAAACACAC GGCAAGATCTCGGATCTATGTATGGCTCTGTCCAAACACAC < 41bp 0.569916916163453 0.904052778798739 0.319428 0.64464474 prediction 0.668271725270572 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101882 chrX:47101883 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25748 0 0 1 0 1 cytosol 0.438719373241384 0.438718604459119 0.28928948 0 hPsi_site_19472 iPseU_CNN:0.28928948;iRNA_PseU:0 19473 chr12 105380143 105380143 1 + G A rs12580271 105380142 + 105380122 105380162 41 GAGGGAAGCATGGAGGTCCATGGCAAGCCCAAGGCTAGCCC GAGGGAAGCATGGAGGTCCATAGCAAGCCCAAGGCTAGCCC < 41bp 0.463144759074054 0.834134786278086 0.25558555 0.31528133 prediction 0.668269572556173 Functional Gain - C12orf45 ENSG00000151131 CDS Human protein_coding chr12:105380142 chr12:105380143 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25749 0 0 1 0 0 Ribosome 0.438718592994733 0.438718592982939 0 0 hPsi_site_19473 iPseU_CNN:0;iRNA_PseU:0 19474 chr7 100028509 100028509 1 + C A BLCA 100028508 + 100028488 100028528 41 CCCGTGCCGCCCACAGCCCCTCTCACCCCCTTACTCCACGG CCCGTGCCGCCCACAGCCCCTATCACCCCCTTACTCCACGG < 41bp 0.525046233052184 0.859180566888727 0.28086397 0.32208574 prediction 0.668268667673086 Functional Gain - MEPCE ENSG00000146834 CDS Human protein_coding chr7:100028508 chr7:100028509 nonsynonymous SNV 0.408 1 22 hPsi_associated_SNPs_25750 0 0 1 0 0 chromatin 0.438718033347483 0.438713425622209 0 0 hPsi_site_19474 iPseU_CNN:0;iRNA_PseU:0 19475 chr17 36622933 36622933 1 + G A MESO 36622932 + 36622912 36622952 41 CCCTGCTCCACCTCCCAGGATGCTTTGAGCCAGCTGGGCCA CCCTGCTCCACCTCCCAGGATACTTTGAGCCAGCTGGGCCA < 41bp 0.435094622320086 0.834129447150447 0.3876649 0.7253456 prediction 0.668258894300894 Functional Gain - ARHGAP23 ENSG00000225485 CDS Human other chr17:36622932 chr17:36622933 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25751 0 0 0 0 0 nucleus 0.438718601094467 0.438718593203866 0.4506912 0 hPsi_site_19475 iPseU_CNN:0.4506912;iRNA_PseU:0 19476 chr11 119050906 119050906 1 + G A rs45450295 119050905 + 119050885 119050925 41 GTGCTGGGCAGCGGAAGGCATGCCCTGGATGAGGTGAACTT GTGCTGGGCAGCGGAAGGCATACCCTGGATGAGGTGAACTT < 41bp 0.427503804240226 0.834129442396454 0.26563752 0.6607826 prediction 0.668258884792909 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119050905 chr11:119050906 nonsynonymous SNV 0.958 0 22 hPsi_associated_SNPs_25752 0 0 0 0 1 exosome 0.438709038331367 0.438705186171224 0.3215652 0 hPsi_site_19476 iPseU_CNN:0.3215652;iRNA_PseU:0 19477 chr16 31477736 31477736 1 + G A UCEC 31477735 + 31477715 31477755 41 CCCTTTCTTCCGGGCCCTGCTGTCAGGCAGCTTTGCAGAAG CCCTTTCTTCCGGGCCCTGCTATCAGGCAGCTTTGCAGAAG < 41bp 0.475148070092789 0.834128314128843 0.27208316 0.7046974 prediction 0.668256628257686 Functional Gain - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31477735 chr16:31477736 synonymous SNV . 0 22 hPsi_associated_SNPs_25753 0 0 1 12 0 cytosol 0.438718632584101 0.438720058847287 0.4093948 0 hPsi_site_19477 iPseU_CNN:0.4093948;iRNA_PseU:0 19478 chr7 104753181 104753181 1 + C A PRAD 104753180 + 104753160 104753200 41 GCACATGTAGTAGGGCCTGTTCATGCGGTCACCCCTGGGTC GCACATGTAGTAGGGCCTGTTAATGCGGTCACCCCTGGGTC < 41bp 0.506651267126684 0.840779430467381 0.32145792 0.66956216 prediction 0.668256326681392 Functional Gain - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104753180 chr7:104753181 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25754 0 0 1 0 0 Cytosol 0.438717603344723 0.438718502389039 0.33912432 0 hPsi_site_19478 iPseU_CNN:0.33912432;iRNA_PseU:0 19479 chr16 72094419 72094419 1 + G A SKCM 72094418 + 72094398 72094438 41 GTGTGGGTTATGTTTCTGGCTGGGGGCGAAATGCCAATTTT GTGTGGGTTATGTTTCTGGCTAGGGGCGAAATGCCAATTTT < 41bp 0.42981274910466 0.834128069706733 0.23288304 0.60864466 prediction 0.668256139413467 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094418 chr16:72094419 stopgain 0.998 1 22 hPsi_associated_SNPs_25755 0 0 1 0 0 cytosol 0.438718588323247 0.438718547586556 0.21728932 0 hPsi_site_19479 iPseU_CNN:0.21728932;iRNA_PseU:0 19480 chr6 138202334 138202334 1 + G A HNSC 138202333 + 138202313 138202353 41 GGCCCTGGGGCCCACCGGGGTGAGCCTGCCCCCGAAGACCC GGCCCTGGGGCCCACCGGGGTAAGCCTGCCCCCGAAGACCC < 41bp 0.561526502917002 0.895644544561742 0.48309153 0.6980682 prediction 0.66823608328948 Functional Gain - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138202333 chr6:138202334 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_25756 0 0 1 0 0 Cytosol 0.438718592402142 0.438718589826462 0.3961364 0 hPsi_site_19480 iPseU_CNN:0.3961364;iRNA_PseU:0 19481 chr20 24930144 24930144 1 + G A BLCA 24930143 + 24930123 24930163 41 TGTCCCTACCCGGGCAGCCATGCGAGCGGCTGGAACTCTGC TGTCCCTACCCGGGCAGCCATACGAGCGGCTGGAACTCTGC < 41bp 0.448358376678623 0.834107848577104 0.17082354 0.25990868 prediction 0.668215697154207 Functional Gain - CST7 ENSG00000077984 CDS Human protein_coding chr20:24930143 chr20:24930144 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_25757 0 0 0 0 1 exosome 0.438718593332834 0.438718595406803 0 0 hPsi_site_19481 iPseU_CNN:0;iRNA_PseU:0 19482 chrX 107396937 107396937 1 + G A PRAD 107396936 + 107396916 107396956 41 GAAGATTTTGAGATTCTGAGTGTGTAGAATCCTGGGAACTC GAAGATTTTGAGATTCTGAGTATGTAGAATCCTGGGAACTC < 41bp 0.444966525612588 0.834101727598095 0.30032694 0.45578736 prediction 0.66820345519619 Functional Gain - ATG4A ENSG00000101844 CDS Human protein_coding chrX:107396936 chrX:107396937 nonsynonymous SNV 0.925 0 22 hPsi_associated_SNPs_25758 0 0 1 1 1 Ribosome 0.438790972019112 0.438733375100332 0 0 hPsi_site_19482 iPseU_CNN:0;iRNA_PseU:0 19483 chr19 7083376 7083376 1 + C A UCEC 7083375 + 7083355 7083395 41 GAAAGGCTTTCGGCACGAGGTCATCTCTTTCTTCGCACTAT GAAAGGCTTTCGGCACGAGGTAATCTCTTTCTTCGCACTAT < 41bp 0.486351732525181 0.834100478397394 0.26699913 0.74453336 prediction 0.668200956794789 Functional Gain - ZNF557 ENSG00000130544 CDS Human protein_coding chr19:7083375 chr19:7083376 stopgain 0.010 0 22 hPsi_associated_SNPs_25759 0 0 1 0 0 Cytosol 0.438718584677352 0.438718592785879 0.48906672 0 hPsi_site_19483 iPseU_CNN:0.48906672;iRNA_PseU:0 19484 chr18 61565062 61565062 1 + C A rs6105 61565061 + 61565041 61565081 41 AAAAAAGATTAATTCCTGGGTCAAGACTCAAACCAAAGGTA AAAAAAGATTAATTCCTGGGTAAAGACTCAAACCAAAGGTA < 41bp 0.497307198051758 0.834098894227265 0.51592475 0.64996165 prediction 0.668197788454529 Functional Gain - SERPINB2 ENSG00000197632;ENSG00000242550 CDS Human other chr18:61565061 chr18:61565062 synonymous SNV . 0 22 hPsi_associated_SNPs_25760 0 0 0 0 1 exosome 0.438718583297263 0.438718593005458 0.2680738 0 hPsi_site_19484 iPseU_CNN:0.2680738;iRNA_PseU:0 19485 chr22 31942924 31942924 1 + G A BLCA 31942923 + 31942903 31942943 41 GGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCT GGTGGGTTTTCCAGCACGAGTAGAAACTCTGTGTTCGAGCT < 41bp 0.441817658150506 0.834095147427119 0.2506882 0.29094672 prediction 0.668190294854239 Functional Gain - SFI1 ENSG00000198089 CDS Human protein_coding chr22:31942923 chr22:31942924 stopgain 0.951 1 22 hPsi_associated_SNPs_25761 0 0 1 0 2 chromatin 0.438718579457992 0.438718445080042 0 0 hPsi_site_19485 iPseU_CNN:0;iRNA_PseU:0 19486 chr1 171130487 171130487 1 + G A rs549989513 171130486 + 171130466 171130506 41 CTTTTACAATTTGCTTAAAATGCTTTCATTCCCATTACTCC CTTTTACAATTTGCTTAAAATACTTTCATTCCCATTACTCC < 41bp 0.518503220690879 0.852598100990306 0.18148533 0.23929352 prediction 0.668189760598855 Functional Gain - FMO6P ENSG00000117507 UTR3 Human transcribed_unitary_pseudogene chr1:171130486 chr1:171130487 . . 0 22 hPsi_associated_SNPs_25762 0 0 0 3 0 unknown 0.438719063198813 0.438716286564844 0 0 hPsi_site_19486 iPseU_CNN:0;iRNA_PseU:0 19487 chr11 18159652 18159652 1 + G A SKCM 18159651 + 18159631 18159671 41 TCTGCAGGACACGCCTGAGGTGGATGAAGGTGGAGGGTGGC TCTGCAGGACACGCCTGAGGTAGATGAAGGTGGAGGGTGGC < 41bp 0.437320237146249 0.834084381807151 0.2860727 0.41271865 prediction 0.668168763614302 Functional Gain - MRGPRX3 ENSG00000179826 CDS Human protein_coding chr11:18159651 chr11:18159652 synonymous SNV . 0 22 hPsi_associated_SNPs_25763 0 0 0 0 0 exosome 0.439070115722981 0.438718644047453 0 0 hPsi_site_19487 iPseU_CNN:0;iRNA_PseU:0 19488 chr18 13731728 13731728 1 + C A READ 13731727 + 13731707 13731747 41 ATGATCTTGTAAAGGAAAGTTCTAGTTGTGGGAAAGACACT ATGATCTTGTAAAGGAAAGTTATAGTTGTGGGAAAGACACT < 41bp 0.493673079005146 0.834077570981379 0.5207128 0.6650784 prediction 0.668155141962758 Functional Gain - RNMT ENSG00000101654 CDS Human protein_coding chr18:13731727 chr18:13731728 nonsynonymous SNV 0.969 2 22 hPsi_associated_SNPs_25764 0 0 1 0 0 Nucleus 0.438676023643794 0.438788720033824 0.2887312 0 hPsi_site_19488 iPseU_CNN:0.2887312;iRNA_PseU:0 19489 chr2 155711367 155711367 1 + G A LUSC 155711366 + 155711346 155711386 41 TCCCAGTTCCATGCAACATTTGAAGTCCCCACCCCACCTTA TCCCAGTTCCATGCAACATTTAAAGTCCCCACCCCACCTTA < 41bp 0.55907173764414 0.89314347837405 0.6781479 0.7636008 prediction 0.66814348145982 Functional Gain - KCNJ3 ENSG00000162989 CDS Human protein_coding chr2:155711366 chr2:155711367 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25765 0 0 0 1 0 exosome 0.438718585976934 0.438718592995102 0.1709058 0 hPsi_site_19489 iPseU_CNN:0.1709058;iRNA_PseU:0 19490 chr14 75361054 75361054 1 + C A GBM 75361053 + 75361033 75361073 41 CGGCAGCGCATTGCTCAGCGTCTGAAGGAGGCCCAGAATAC CGGCAGCGCATTGCTCAGCGTATGAAGGAGGCCCAGAATAC < 41bp 0.465637062902735 0.834070548607404 0.35893512 0.73892933 prediction 0.668141097214808 Functional Gain - DLST ENSG00000119689 CDS Human protein_coding chr14:75361053 chr14:75361054 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25766 0 0 1 0 2 Ribosome 0.438704372813507 0.438718620226544 0.47785866 0 hPsi_site_19490 iPseU_CNN:0.47785866;iRNA_PseU:0 19491 chr7 149578870 149578870 1 + G A rs76023942 149578869 + 149578849 149578889 41 TGTGGAGGATGCCGGGAGGTTGCAGGTAGCCGGAAGACAAC TGTGGAGGATGCCGGGAGGTTACAGGTAGCCGGAAGACAAC < 41bp 0.490526654931379 0.83406981723522 0.27649128 0.7151976 prediction 0.66813963447044 Functional Gain - ACTR3C ENSG00000273293 upstream Human lincRNA chr7:149578869 chr7:149578870 . . 0 22 hPsi_associated_SNPs_25767 0 0 0 0 0 chromatin 0.438712435888501 0.43871533269106 0.4303952 0 hPsi_site_19491 iPseU_CNN:0.4303952;iRNA_PseU:0 19492 chr5 72798343 72798343 1 + C A UCEC 72798342 + 72798322 72798362 41 CGCAGAAAGAAGAAGGTGGTTCATAGAACAGCCACAGCAGA CGCAGAAAGAAGAAGGTGGTTAATAGAACAGCCACAGCAGA < 41bp 0.481470732219577 0.83405344879603 0.2895974 0.3669079 prediction 0.66810689759206 Functional Gain - BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798342 chr5:72798343 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25768 0 0 1 0 1 Ribosome 0.438716469918103 0.438718654606379 0 0 hPsi_site_19492 iPseU_CNN:0;iRNA_PseU:0 19493 chr17 7256381 7256381 1 + G A BLCA 7256380 + 7256360 7256400 41 CCGGCACATCCTCAATTTCCTGAGGCTGGGCCGCCTGGACC CCGGCACATCCTCAATTTCCTAAGGCTGGGCCGCCTGGACC < 41bp 0.433608935998543 0.834043859593963 0.21700487 0.33572835 prediction 0.668087719187925 Functional Gain - KCTD11 ENSG00000213859 CDS Human protein_coding chr17:7256380 chr17:7256381 synonymous SNV . 0 22 hPsi_associated_SNPs_25769 0 0 1 0 0 exosome 0.438718592490681 0.438718611487065 0 0 hPsi_site_19493 iPseU_CNN:0;iRNA_PseU:0 19494 chr7 140396598 140396598 1 + C T LUAD 140396599 - 140396579 140396619 41 AGTCCGTGCGCAGCCGCTTCTGAAAAGGCGGCCTCCAACGC AGTCCGTGCGCAGCCGCTTCTAAAAAGGCGGCCTCCAACGC < 41bp 0.553337540968742 0.887374274330669 0.19890067 0.31259644 prediction 0.668073466723853 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140396599 chr7:140396598 synonymous SNV . 0 22 hPsi_associated_SNPs_25770 0 0 0 0 1 Ribosome 0.438678667256929 0.438711956918512 0 0 hPsi_site_19494 iPseU_CNN:0;iRNA_PseU:0 19495 chr19 14562753 14562753 1 + G A LUSC 14562752 + 14562732 14562772 41 AGACAGCCGCCCCCCCTTCCTGAGCCGCCCAGCCCGGGGCC AGACAGCCGCCCCCCCTTCCTAAGCCGCCCAGCCCGGGGCC < 41bp 0.428850842814446 0.834035792269537 0.23931515 0.3330421 prediction 0.668071584539075 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562752 chr19:14562753 synonymous SNV . 0 22 hPsi_associated_SNPs_25771 0 0 1 0 1 Ribosome 0.438718592800006 0.438718592995104 0 0 hPsi_site_19495 iPseU_CNN:0;iRNA_PseU:0 19496 chr3 129694861 129694861 1 + G A SKCM 129694860 + 129694840 129694880 41 CGGCTGCAAGGGGACCAGGGTGAGCACTCCGGTGAGTGGAT CGGCTGCAAGGGGACCAGGGTAAGCACTCCGGTGAGTGGAT < 41bp 0.434684256223287 0.834034510690218 0.29887816 0.4515574 prediction 0.668069021380435 Functional Gain - TRH ENSG00000170893 CDS Human protein_coding chr3:129694860 chr3:129694861 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_25772 0 0 0 0 1 Cytosol 0.440654826952748 0.438693585685984 0 0 hPsi_site_19496 iPseU_CNN:0;iRNA_PseU:0 19497 chr5 31318010 31318010 1 + C A LUSC 31318009 + 31317989 31318029 41 GGGGCTCTGGTTGCCATCCTTCTGTGCATCGTGATCCTACT GGGGCTCTGGTTGCCATCCTTATGTGCATCGTGATCCTACT < 41bp 0.480070019093034 0.834034024231476 0.4531568 0.5795212 prediction 0.668068048462952 Functional Gain - CDH6 ENSG00000113361 CDS Human protein_coding chr5:31318009 chr5:31318010 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25773 0 0 0 0 1 exosome 0.438746993531525 0.438751218401602 0.1590424 0 hPsi_site_19497 iPseU_CNN:0.1590424;iRNA_PseU:0 19498 chr11 60565908 60565908 1 + C A UCEC 60565907 + 60565887 60565927 41 GTTCCGAATACACCATTGCATCTCAAAGGCCTGCCGGTGGA GTTCCGAATACACCATTGCATATCAAAGGCCTGCCGGTGGA < 41bp 0.510657287491195 0.844690232136714 0.6934505 0.70950603 prediction 0.668065889291037 Functional Gain - MS4A10 ENSG00000172689 CDS Human protein_coding chr11:60565907 chr11:60565908 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25774 0 0 0 0 2 Nucleus 0.438706015515111 0.438735086929132 0.0321110600000001 0 hPsi_site_19498 iPseU_CNN:0.0321110600000001;iRNA_PseU:0 19499 chr1 33563720 33563720 1 + G A UCEC 33563719 + 33563699 33563739 41 GTACCACCTTGATGAGGGCGTGTATGGGATCTTCAACTCAG GTACCACCTTGATGAGGGCGTATATGGGATCTTCAACTCAG < 41bp 0.555412877223513 0.889445274653411 0.26570797 0.3590672 prediction 0.668064794859796 Functional Gain - AZIN2 ENSG00000142920 CDS Human protein_coding chr1:33563719 chr1:33563720 synonymous SNV . 0 22 hPsi_associated_SNPs_25775 0 0 0 0 2 Nucleus 0.438704349020577 0.438685343039214 0 0 hPsi_site_19499 iPseU_CNN:0;iRNA_PseU:0 19500 chr1 228210455 228210455 1 + C A LUAD 228210454 + 228210434 228210474 41 GGGCCTGGTCCCCAAGCAGCTCCGCTTCTGCAGGAACTACG GGGCCTGGTCCCCAAGCAGCTACGCTTCTGCAGGAACTACG < 41bp 0.479519540634903 0.83402491991112 0.3144892 0.7936066 prediction 0.668049839822241 Functional Gain - WNT3A ENSG00000154342 CDS Human protein_coding chr1:228210454 chr1:228210455 synonymous SNV . 0 22 hPsi_associated_SNPs_25776 0 0 0 0 1 exosome 0.438718592731032 0.438718589721704 0.5872132 0 hPsi_site_19500 iPseU_CNN:0.5872132;iRNA_PseU:0 19501 chr3 121643813 121643813 1 + C A BLCA 121643812 + 121643792 121643832 41 GTTCTAAATCCCCTTCTGGTTCTTATCTTCATCCCGTTGTT GTTCTAAATCCCCTTCTGGTTATTATCTTCATCCCGTTGTT < 41bp 0.490184996947271 0.834024041428358 0.2555136 0.25686547 prediction 0.668048082856716 Functional Gain - SLC15A2 ENSG00000163406 CDS Human protein_coding chr3:121643812 chr3:121643813 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25777 0 0 0 0 2 cytosol 0.438722668991502 0.438703330840644 0 0 hPsi_site_19501 iPseU_CNN:0;iRNA_PseU:0 19502 chr2 219499221 219499221 1 + C A GBM 219499220 + 219499200 219499240 41 TGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCC TGCAGGGCTTGAAATGGACATATGTGATGGGCATTTCCGCC < 41bp 0.464128958459519 0.834023830889828 0.44225097 0.61379 prediction 0.668047661779657 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219499220 chr2:219499221 synonymous SNV . 0 22 hPsi_associated_SNPs_25778 0 0 0 0 1 chromatin 0.438717517903614 0.438178886953029 0.22758 0 hPsi_site_19502 iPseU_CNN:0.22758;iRNA_PseU:0 19503 chr22 49145653 49145653 1 + C A UCEC 49145652 + 49145632 49145672 41 CTCTCTCTTTGCTCCTCAGGTCTCCTGACAAACACAGCCCC CTCTCTCTTTGCTCCTCAGGTATCCTGACAAACACAGCCCC < 41bp 0.503280689219825 0.837300203880106 0.25978863 0.6891276 prediction 0.668039029320562 Functional Gain - FAM19A5 ENSG00000219438 CDS Human protein_coding chr22:49145652 chr22:49145653 synonymous SNV . 0 22 hPsi_associated_SNPs_25779 0 0 1 0 1 membrane 0.438718705197102 0.43872234049348 0.3782552 0 hPsi_site_19503 iPseU_CNN:0.3782552;iRNA_PseU:0 19504 chr16 3406411 3406411 1 + G A SARC 3406410 + 3406390 3406430 41 GGGTGGCTTGGGCAACTCTGTGATCCAGTCAACATTCACTC GGGTGGCTTGGGCAACTCTGTAATCCAGTCAACATTCACTC < 41bp 0.55421292177799 0.888227588770887 0.5536278 0.9123062 prediction 0.668029333985793 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406410 chr16:3406411 synonymous SNV . 0 22 hPsi_associated_SNPs_25780 0 0 0 0 0 unknown 0.428549158273224 0.437616317806171 0.7173568 0 hPsi_site_19504 iPseU_CNN:0.7173568;iRNA_PseU:0 19505 chr10 114177625 114177625 1 + C A HNSC 114177624 + 114177604 114177644 41 GACAGCCTGGGCGGAAGGGTTCGTGTAATTGTCACTGGAGC GACAGCCTGGGCGGAAGGGTTAGTGTAATTGTCACTGGAGC < 41bp 0.530350366602299 0.864361081668166 0.7148522 0.8009794 prediction 0.668021430131735 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114177624 chr10:114177625 nonsynonymous SNV 0.009 2 22 hPsi_associated_SNPs_25781 0 0 1 0 2 Ribosome 0.438718592644013 0.438718598584507 0.1722544 0 hPsi_site_19505 iPseU_CNN:0.1722544;iRNA_PseU:0 19506 chr3 12858855 12858855 1 + G A ESCA 12858854 + 12858834 12858874 41 CCACTCATTGGCCCGGTGTGTGGCAGCCCTCTCAGCTGCCT CCACTCATTGGCCCGGTGTGTAGCAGCCCTCTCAGCTGCCT < 41bp 0.420754419709441 0.83400438192595 0.31304765 0.6557205 prediction 0.6680087638519 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858854 chr3:12858855 synonymous SNV . 0 22 hPsi_associated_SNPs_25782 0 0 1 0 0 chromatin 0.438721582747415 0.438718593260519 0.311441 0 hPsi_site_19506 iPseU_CNN:0.311441;iRNA_PseU:0 19507 chr13 51918407 51918407 1 + C A UCEC 51918406 + 51918386 51918426 41 AGACAAAAGGGTGAAAGATTTCTTGCATGCTGTTTATGCCA AGACAAAAGGGTGAAAGATTTATTGCATGCTGTTTATGCCA < 41bp 0.520592768711892 0.854595790442744 0.38725787 0.56606495 prediction 0.668006043461704 Functional Gain - SERPINE3 ENSG00000253309 CDS Human protein_coding chr13:51918406 chr13:51918407 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_25783 0 0 0 0 1 nucleus 0.438717380219089 0.438443052823662 0.1321299 0 hPsi_site_19507 iPseU_CNN:0.1321299;iRNA_PseU:0 19508 chrX 151092947 151092947 1 + G A SKCM 151092946 + 151092926 151092966 41 GGCAGTAATCCTGCGCGCTATGAGTTCCTGTGGGGTCCAAG GGCAGTAATCCTGCGCGCTATAAGTTCCTGTGGGGTCCAAG < 41bp 0.555084767099133 0.889085581828396 0.2775192 0.3975646 prediction 0.668001629458526 Functional Gain - MAGEA4 ENSG00000147381 CDS Human protein_coding chrX:151092946 chrX:151092947 nonsynonymous SNV 0.106 3 22 hPsi_associated_SNPs_25784 0 0 0 0 0 unknown 0.438723730194763 0.438688691654629 0 0 hPsi_site_19508 iPseU_CNN:0;iRNA_PseU:0 19509 chr1 150053481 150053481 1 + C A UCEC 150053480 + 150053460 150053500 41 ATAAACAACAATCGGATTGATCTTTCCAGAGTGCCGGGAAT ATAAACAACAATCGGATTGATATTTCCAGAGTGCCGGGAAT < 41bp 0.517913494341426 0.851902601228054 0.16743684 0.26863816 prediction 0.667978213773255 Functional Gain - VPS45 ENSG00000136631 CDS Human protein_coding chr1:150053480 chr1:150053481 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25785 0 0 1 0 2 Nucleus 0.438718593001794 0.438718592995828 0 0 hPsi_site_19509 iPseU_CNN:0;iRNA_PseU:0 19510 chr2 143799663 143799663 1 + C A COAD 143799662 + 143799642 143799682 41 TCGAGTGGCTCCAGTTCCTCTCTATAATTCTTTCCATGATG TCGAGTGGCTCCAGTTCCTCTATATAATTCTTTCCATGATG < 41bp 0.508225028220431 0.842205900295891 0.23105258 0.24980506 prediction 0.667961744150919 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143799662 chr2:143799663 synonymous SNV . 0 22 hPsi_associated_SNPs_25786 0 0 1 0 0 Nucleus 0.438718598576002 0.438718593035622 0 0 hPsi_site_19510 iPseU_CNN:0;iRNA_PseU:0 19511 chr11 119024750 119024750 1 + C A UCEC 119024749 + 119024729 119024769 41 ACTGCAGGTTATAAGACCCTTCTCAAGTGCCTCTCAGGTAA ACTGCAGGTTATAAGACCCTTATCAAGTGCCTCTCAGGTAA < 41bp 0.476140273320884 0.833979252512932 0.5845549 0.5428513 prediction 0.667958505025864 Functional Gain - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119024749 chr11:119024750 nonsynonymous SNV 0.986 3 22 hPsi_associated_SNPs_25787 0 0 0 0 1 exosome 0.43868815106619 0.439270911251471 0 0 hPsi_site_19511 iPseU_CNN:0;iRNA_PseU:0 19512 chr2 162274732 162274732 1 + C A LUAD 162274731 + 162274711 162274751 41 GGAAATCGGGTCTATATGCATCCGGATTCCCCCAACACTGG GGAAATCGGGTCTATATGCATACGGATTCCCCCAACACTGG < 41bp 0.468914606827269 0.833975748160103 0.2268439 0.34881175 prediction 0.667951496320206 Functional Gain - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162274731 chr2:162274732 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_25788 0 0 0 0 1 exosome 0.438718592996404 0.438723357152103 0 0 hPsi_site_19512 iPseU_CNN:0;iRNA_PseU:0 19513 chr11 65726735 65726735 1 + G A rs373566789 65726734 + 65726714 65726754 41 GGGGCTGGATGAGGAGCAGCTGCTGTCTGAGGCAGGAAAGG GGGGCTGGATGAGGAGCAGCTACTGTCTGAGGCAGGAAAGG < 41bp 0.567134830917902 0.901108703816632 0.21954799 0.6841164 prediction 0.667947745797461 Functional Gain - TSGA10IP ENSG00000175513 CDS Human protein_coding chr11:65726734 chr11:65726735 unknown . 0 22 hPsi_associated_SNPs_25789 0 0 0 0 2 exosome 0.438718593699293 0.438717926440599 0.3682328 0 hPsi_site_19513 iPseU_CNN:0.3682328;iRNA_PseU:0 19514 chr3 51743339 51743339 1 + G A PAAD 51743338 + 51743318 51743358 41 CGTGCCTCACTCAGCCGTGGTGCTGATGGCTCACGCCACAT CGTGCCTCACTCAGCCGTGGTACTGATGGCTCACGCCACAT < 41bp 0.561383663402031 0.895355091610575 0.22226018 0.70970565 prediction 0.667942856417089 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51743338 chr3:51743339 nonsynonymous SNV 0.958 2 22 hPsi_associated_SNPs_25790 0 0 0 0 0 Endoplasmic reticulum 0.438718799057059 0.43881675408325 0.4194113 0 hPsi_site_19514 iPseU_CNN:0.4194113;iRNA_PseU:0 19515 chr11 73021833 73021833 1 + C A UCEC 73021832 + 73021812 73021852 41 GCAAAGTCCCACCTTCAGGTTCTGGTGGGAGCGAATTGAGC GCAAAGTCCCACCTTCAGGTTATGGTGGGAGCGAATTGAGC < 41bp 0.520210458089034 0.85418154679217 0.4247271 0.6387297 prediction 0.667942177406273 Functional Gain - ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73021832 chr11:73021833 nonsynonymous SNV 0.935 1 22 hPsi_associated_SNPs_25791 0 0 0 0 0 Cytosol 0.438718366328365 0.438714197255511 0.2774594 0 hPsi_site_19515 iPseU_CNN:0.2774594;iRNA_PseU:0 19516 chr19 4501316 4501316 1 + G A BLCA 4501315 + 4501295 4501335 41 GGGCCAAGGTGTGGCTCCTCTGAAGACCTGCACGAGTGAGT GGGCCAAGGTGTGGCTCCTCTAAAGACCTGCACGAGTGAGT < 41bp 0.550115924292916 0.884082746568982 0.44317737 0.6917173 prediction 0.667933644552131 Functional Gain - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4501315 chr19:4501316 nonsynonymous SNV 0.926 1 22 hPsi_associated_SNPs_25792 0 0 1 0 1 unknown 0.438719482280418 0.438753947196405 0.3834346 0 hPsi_site_19516 iPseU_CNN:0.3834346;iRNA_PseU:0 19517 chr16 67681069 67681069 1 + G A UCEC 67681068 + 67681048 67681088 41 CCTACAACCTGTGGTTCCGGTGCCTCTCCTGTGTGGACATG CCTACAACCTGTGGTTCCGGTACCTCTCCTGTGTGGACATG < 41bp 0.424065024356062 0.833965006017321 0.2084167 0.7544644 prediction 0.667930012034643 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67681068 chr16:67681069 nonsynonymous SNV 0.984 1 22 hPsi_associated_SNPs_25793 0 0 1 0 2 chromatin 0.437130370985357 0.438637017409402 0.5089288 0 hPsi_site_19517 iPseU_CNN:0.5089288;iRNA_PseU:0 19518 chr1 152733226 152733226 1 + C A STAD 152733225 + 152733205 152733245 41 AGCTTCTGTCCACCACGGCGTCTTGACCAGTGTCCAGAGTC AGCTTCTGTCCACCACGGCGTATTGACCAGTGTCCAGAGTC < 41bp 0.476567841771418 0.833957191151226 0.23066753 0.5578558 prediction 0.667914382302452 Functional Gain - KPRP ENSG00000203786 CDS Human protein_coding chr1:152733225 chr1:152733226 nonsynonymous SNV 0.026 0 22 hPsi_associated_SNPs_25794 0 0 0 0 0 exosome 0.43874509113347 0.433652851890822 0.1157116 0 hPsi_site_19518 iPseU_CNN:0.1157116;iRNA_PseU:0 19519 chr1 212799925 212799925 1 + C T LAML 212799926 - 212799906 212799946 41 TCCAGCCCCTGGCCACCCTCTGCTGTCTCGGCGATGGCCAC TCCAGCCCCTGGCCACCCTCTACTGTCTCGGCGATGGCCAC < 41bp 0.459644424516749 0.833950932479362 0.28455317 0.72439724 prediction 0.667901864958723 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212799926 chr1:212799925 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25795 0 0 0 0 0 exosome 0.438717873412199 0.438710839031452 0.44879448 0 hPsi_site_19519 iPseU_CNN:0.44879448;iRNA_PseU:0 19520 chr17 48434025 48434025 1 + G A SARC 48434024 + 48434004 48434044 41 AACACCTACGACGCGGCTGATGGCCCCAGTGGGCTCAGTGA AACACCTACGACGCGGCTGATAGCCCCAGTGGGCTCAGTGA < 41bp 0.419742330234536 0.833947460075346 0.22023463 0.31400707 prediction 0.667894920150692 Functional Gain - XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48434024 chr17:48434025 nonsynonymous SNV 0.673 3 22 hPsi_associated_SNPs_25796 0 0 0 0 0 nucleolus 0.438718593028067 0.438718593080619 0 0 hPsi_site_19520 iPseU_CNN:0;iRNA_PseU:0 19521 chr3 37067374 37067374 1 + G A UCS 37067373 + 37067353 37067393 41 GGCAGGGCTAGGCAGCAAGATGAGGAGATGCTTGAACTCCC GGCAGGGCTAGGCAGCAAGATAAGGAGATGCTTGAACTCCC < 41bp 0.474342889884185 0.8339474261157 0.22551566 0.31356907 prediction 0.667894852231401 Functional Gain - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37067373 chr3:37067374 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_25797 0 0 1 0 0 Cytosol 0.438866596621723 0.438718619016141 0 0 hPsi_site_19521 iPseU_CNN:0;iRNA_PseU:0 19522 chr21 34652118 34652118 1 + C A UCEC 34652117 + 34652097 34652137 41 TGATTCTTTACATATGCGTTTCTTAGCCCCTAAAATTGAGA TGATTCTTTACATATGCGTTTATTAGCCCCTAAAATTGAGA < 41bp 0.482718088877298 0.833941808983408 0.39592648 0.37584874 prediction 0.667883617966816 Functional Gain - IL10RB ENSG00000243646;ENSG00000249624 CDS Human other chr21:34652117 chr21:34652118 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_25798 0 0 1 0 1 Endoplasmic reticulum 0.438730943133383 0.438718325648239 0 0 hPsi_site_19522 iPseU_CNN:0;iRNA_PseU:0 19523 chr17 60813443 60813443 1 + G A UCEC 60813442 + 60813422 60813462 41 AAGTAAATGGTGTATTTTCTTGCAGAGACCCAGACACATGC AAGTAAATGGTGTATTTTCTTACAGAGACCCAGACACATGC < 41bp 0.46094734432404 0.833939077263436 0.30610567 0.73129165 prediction 0.667878154526872 Functional Gain - MARCH10 ENSG00000173838 CDS Human protein_coding chr17:60813442 chr17:60813443 stopgain 0.743 0 22 hPsi_associated_SNPs_25799 0 0 0 0 0 nucleus 0.438539973912641 0.438670312814282 0.4625833 0 hPsi_site_19523 iPseU_CNN:0.4625833;iRNA_PseU:0 19524 chr1 6634815 6634815 1 + G A SKCM 6634814 + 6634794 6634834 41 TGCTGCTGCAGAAGTTCGGGTGGACCTGGATCTCTCTGGTT TGCTGCTGCAGAAGTTCGGGTAGACCTGGATCTCTCTGGTT < 41bp 0.414862780281327 0.833931164726652 0.2517221 0.47851864 prediction 0.667862329453304 Functional Gain - TAS1R1 ENSG00000173662 CDS Human protein_coding chr1:6634814 chr1:6634815 stopgain 0.967 1 22 hPsi_associated_SNPs_25800 0 0 0 0 0 membrane 0.438718586066699 0.438713270580943 0 0 hPsi_site_19524 iPseU_CNN:0;iRNA_PseU:0 19525 chr1 26581895 26581895 1 + C A UCEC 26581894 + 26581874 26581914 41 TCTCCAGGCCTATCTAGAGATCTCATGTATTTCTCTGGTGC TCTCCAGGCCTATCTAGAGATATCATGTATTTCTCTGGTGC < 41bp 0.473071461916644 0.833930181564249 0.30860493 0.29106933 prediction 0.667860363128498 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26581894 chr1:26581895 nonsynonymous SNV 0.664 0 22 hPsi_associated_SNPs_25801 0 0 1 0 0 Nucleus 0.438718848108368 0.438707096632308 0 0 hPsi_site_19525 iPseU_CNN:0;iRNA_PseU:0 19526 chr7 90894672 90894672 1 + G A UCEC 90894671 + 90894651 90894691 41 GTTCTACCCTCTAGTGAAAGTGCAGTGTTCCGCTGAGCTCA GTTCTACCCTCTAGTGAAAGTACAGTGTTCCGCTGAGCTCA < 41bp 0.555051945846047 0.888974898530656 0.3385052 0.55190563 prediction 0.667845905369218 Functional Gain - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90894671 chr7:90894672 synonymous SNV . 0 22 hPsi_associated_SNPs_25802 0 0 0 0 0 Endoplasmic reticulum 0.43747047913792 0.437610173067764 0.10381126 0 hPsi_site_19526 iPseU_CNN:0.10381126;iRNA_PseU:0 19527 chr2 219678830 219678830 1 + G A rs151064520 219678829 + 219678809 219678849 41 GCACGAGGAAGTGGTGGGTGTGGTGCCAGCCGGGCAAGTGC GCACGAGGAAGTGGTGGGTGTAGTGCCAGCCGGGCAAGTGC < 41bp 0.417036843708818 0.833921596464268 0.26557064 0.87897646 prediction 0.667843192928535 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219678829 chr2:219678830 synonymous SNV . 0 22 hPsi_associated_SNPs_25803 0 0 1 0 2 cytosol 0.439545068287739 0.438718604797672 0.75795292 0 hPsi_site_19527 iPseU_CNN:0.75795292;iRNA_PseU:0 19528 chr11 19191996 19191996 1 + G A COAD 19191995 + 19191975 19192015 41 GCCACAACATTCAAAGAAGATGGATTATGGACTTACCTCAA GCCACAACATTCAAAGAAGATAGATTATGGACTTACCTCAA < 41bp 0.428984517549848 0.833915873554801 0.28806746 0.34171087 prediction 0.667831747109601 Functional Gain - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19191995 chr11:19191996 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25804 0 0 1 0 1 Nucleus 0.438718593031173 0.438721032428871 0 0 hPsi_site_19528 iPseU_CNN:0;iRNA_PseU:0 19529 chr16 56667747 56667747 1 + G A UCEC 56667746 + 56667726 56667766 41 CGTTGGAGAACTGCAGCTGCTGTGCCTGATGTGGGAACAGC CGTTGGAGAACTGCAGCTGCTATGCCTGATGTGGGAACAGC < 41bp 0.439560903385092 0.833913175495805 0.4684288 0.7674571 prediction 0.66782635099161 Functional Gain - MT1M ENSG00000205364 CDS Human protein_coding chr16:56667746 chr16:56667747 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_25805 0 0 0 0 1 exosome 0.43924711376335 0.438875158446708 0.5349142 0 hPsi_site_19529 iPseU_CNN:0.5349142;iRNA_PseU:0 19530 chr7 98951728 98951728 1 + G A UCEC 98951727 + 98951707 98951747 41 AGCACCGTGTCTGTTGCTGATGCCTCAAAAAGTGTGCAGTG AGCACCGTGTCTGTTGCTGATACCTCAAAAAGTGTGCAGTG < 41bp 0.562961190919192 0.896870884628385 0.24676114 0.49167994 prediction 0.667819387418386 Functional Gain - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98951727 chr7:98951728 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25806 0 0 1 1 1 Cytosol 0.441222461339524 0.437912044907781 0 0 hPsi_site_19530 iPseU_CNN:0;iRNA_PseU:0 19531 chr2 73447828 73447828 1 + G A CESC 73447827 + 73447807 73447847 41 GAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCT GAATGTCGGTTGGCAGCCACTAAGCAATACCACCAGGTCCT < 41bp 0.412946450384334 0.833894122354516 0.25784838 0.39492664 prediction 0.667788244709031 Functional Gain - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73447827 chr2:73447828 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25807 0 0 0 0 2 Ribosome 0.438716490282138 0.438725506587103 0 0 hPsi_site_19531 iPseU_CNN:0;iRNA_PseU:0 19532 chr22 25023413 25023413 1 + G A SKCM 25023412 + 25023392 25023432 41 TCGGCAGGTGGTCCGCAACATGACCTCCGAGTTCTTCGCTG TCGGCAGGTGGTCCGCAACATAACCTCCGAGTTCTTCGCTG < 41bp 0.423021693023642 0.833891850611395 0.22630763 0.3249911 prediction 0.66778370122279 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25023412 chr22:25023413 nonsynonymous SNV 0.815 2 22 hPsi_associated_SNPs_25808 0 0 0 0 1 exosome 0.438718435438539 0.438718723931186 0 0 hPsi_site_19532 iPseU_CNN:0;iRNA_PseU:0 19533 chr9 100616622 100616622 1 + C A BLCA 100616621 + 100616601 100616641 41 CATGTTCGAGAGCGGCAGCTTCCTGCGCCGCCGCAAGCGCT CATGTTCGAGAGCGGCAGCTTACTGCGCCGCCGCAAGCGCT < 41bp 0.516345713242928 0.850237399442314 0.42452037 0.80924493 prediction 0.667783372398772 Functional Gain - FOXE1 ENSG00000178919 CDS Human protein_coding chr9:100616621 chr9:100616622 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25809 0 0 0 0 0 exosome 0.437999228665877 0.429721248633224 0.61848986 0 hPsi_site_19533 iPseU_CNN:0.61848986;iRNA_PseU:0 19534 chr16 75688229 75688229 1 + C A OV 75688228 + 75688208 75688248 41 AGAGTATGTGAAGGAAGAAATCCAGGAGAATGAAGAAGCAG AGAGTATGTGAAGGAAGAAATACAGGAGAATGAAGAAGCAG < 41bp 0.47790611915419 0.833891502737047 0.19852525 0.261055 prediction 0.667783005474095 Functional Gain - TERF2IP ENSG00000166848 CDS Human protein_coding chr16:75688228 chr16:75688229 synonymous SNV . 0 22 hPsi_associated_SNPs_25810 0 0 1 0 2 Ribosome 0.438718593327719 0.438721765336873 0 0 hPsi_site_19534 iPseU_CNN:0;iRNA_PseU:0 19535 chr12 49949443 49949443 1 + C A STAD 49949442 + 49949422 49949462 41 GCGGCGACAATACCCTTATGTCCACGCTGGAGGAGAAGGAG GCGGCGACAATACCCTTATGTACACGCTGGAGGAGAAGGAG < 41bp 0.473089591471653 0.833890413269216 0.31943783 0.7142074 prediction 0.667780826538432 Functional Gain - KCNH3 ENSG00000135519 CDS Human protein_coding chr12:49949442 chr12:49949443 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_25811 0 0 0 0 1 chromatin 0.438718592995102 0.438718592926982 0.4284148 0 hPsi_site_19535 iPseU_CNN:0.4284148;iRNA_PseU:0 19536 chr4 36309976 36309976 1 + G A rs73117691 36309975 + 36309955 36309995 41 TAGAATAGCTGTTTTAGTGGTGCCTTCCAAAGATTTAAGCC TAGAATAGCTGTTTTAGTGGTACCTTCCAAAGATTTAAGCC < 41bp 0.427405205036269 0.833889673884703 0.34079266 0.71333194 prediction 0.667779347769407 Functional Gain - DTHD1 ENSG00000197057 CDS Human protein_coding chr4:36309975 chr4:36309976 synonymous SNV . 0 22 hPsi_associated_SNPs_25812 0 0 0 0 0 exosome 0.438718592995238 0.438718592942145 0.42666388 0 hPsi_site_19536 iPseU_CNN:0.42666388;iRNA_PseU:0 19537 chr19 3179777 3179777 1 + G A rs148468343 3179776 + 3179756 3179796 41 CTGCTGCGGGTGTCTCCGGCTGGGCATGCGAGGGCCCGGGG CTGCTGCGGGTGTCTCCGGCTAGGCATGCGAGGGCCCGGGG < 41bp 0.458897677395955 0.833882225441322 0.2779206 0.5340276 prediction 0.667764450882644 Functional Gain - S1PR4 ENSG00000125910 CDS Human protein_coding chr19:3179776 chr19:3179777 synonymous SNV . 0 22 hPsi_associated_SNPs_25813 0 0 0 0 0 exosome 0.43765979114237 0.438324092757587 0.0680552000000001 0 hPsi_site_19537 iPseU_CNN:0.0680552000000001;iRNA_PseU:0 19538 chr4 20255507 20255507 1 + G A rs35451935 20255506 + 20255486 20255526 41 GCTGGCGATCCTGAACAAGGTGGCACCGCAGGCGTGCCCGG GCTGGCGATCCTGAACAAGGTAGCACCGCAGGCGTGCCCGG < 41bp 0.46022072697043 0.833876000829728 0.26029658 0.59044456 prediction 0.667752001659456 Functional Gain - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20255506 chr4:20255507 synonymous SNV . 0 22 hPsi_associated_SNPs_25814 0 0 1 0 0 Ribosome 0.438718611074608 0.438718629883265 0.18088912 0 hPsi_site_19538 iPseU_CNN:0.18088912;iRNA_PseU:0 19539 chr1 55523730 55523730 1 + C A COAD 55523729 + 55523709 55523749 41 GCATTGCAGCCATGATGCTGTCTGCCGAGCCGGAGCTCACC GCATTGCAGCCATGATGCTGTATGCCGAGCCGGAGCTCACC < 41bp 0.539127904096889 0.873002454661693 0.26172763 0.55885416 prediction 0.667749101129608 Functional Gain - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55523729 chr1:55523730 nonsynonymous SNV 0.007 3 22 hPsi_associated_SNPs_25815 0 0 1 0 1 Nucleus 0.438718628872516 0.438719491898422 0.11770832 0 hPsi_site_19539 iPseU_CNN:0.11770832;iRNA_PseU:0 19540 chr1 248551338 248551338 1 + G A SKCM 248551337 + 248551317 248551357 41 CAGCTGGCGGGTCTGCTGGATGATCCTGGCCAGCTCTTGGT CAGCTGGCGGGTCTGCTGGATAATCCTGGCCAGCTCTTGGT < 41bp 0.442820600575074 0.833871781532281 0.22598377 0.63520664 prediction 0.667743563064562 Functional Gain - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551337 chr1:248551338 nonsynonymous SNV 0.485 0 22 hPsi_associated_SNPs_25816 0 0 0 0 0 unknown 0.438736919446846 0.438717995116629 0.27041328 0 hPsi_site_19540 iPseU_CNN:0.27041328;iRNA_PseU:0 19541 chr19 41822566 41822566 1 + G A LUSC 41822565 + 41822545 41822585 41 CGAGAAGCCACTGGTGTTCCTGGAGCGCTTCCGCACAGGCC CGAGAAGCCACTGGTGTTCCTAGAGCGCTTCCGCACAGGCC < 41bp 0.41926618013064 0.833871035552209 0.17852756 0.41232732 prediction 0.667742071104418 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822565 chr19:41822566 synonymous SNV . 0 22 hPsi_associated_SNPs_25817 0 0 1 0 0 chromatin 0.43871859300048 0.438721863297808 0 0 hPsi_site_19541 iPseU_CNN:0;iRNA_PseU:0 19542 chr5 5473702 5473702 1 + C A COAD 5473701 + 5473681 5473721 41 TAGATGTTGGCTTCATGGTTTCTAAGCTGCTTTTGACCATA TAGATGTTGGCTTCATGGTTTATAAGCTGCTTTTGACCATA < 41bp 0.497834548279857 0.833863737725394 0.40191817 0.4143963 prediction 0.667727475450789 Functional Gain - ICE1 ENSG00000164151 CDS Human protein_coding chr5:5473701 chr5:5473702 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25818 0 0 1 0 1 Nucleus 0.438460267808449 0.438718594521148 0 0 hPsi_site_19542 iPseU_CNN:0;iRNA_PseU:0 19543 chr1 248084490 248084490 1 + G A CESC 248084489 + 248084469 248084509 41 CCACCGGCTCCACACGCCCATGTACTTCCTCCTGAGCCAAC CCACCGGCTCCACACGCCCATATACTTCCTCCTGAGCCAAC < 41bp 0.551288841502788 0.88514427619091 0.2703995 0.4813984 prediction 0.667710869376244 Functional Gain - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248084489 chr1:248084490 nonsynonymous SNV 0.015 2 22 hPsi_associated_SNPs_25819 0 0 0 0 0 exosome 0.4386590974286 0.438725757153183 0 0 hPsi_site_19543 iPseU_CNN:0;iRNA_PseU:0 19544 chr19 35827021 35827021 1 + C A UCEC 35827020 + 35827000 35827040 41 TCTGACCTGCTTGCTGAATTTCTCCTGCTATGGGTATCCGA TCTGACCTGCTTGCTGAATTTATCCTGCTATGGGTATCCGA < 41bp 0.471322704682908 0.833854720370861 0.41124022 0.62079775 prediction 0.667709440741722 Functional Gain - CD22 ENSG00000012124 CDS Human protein_coding chr19:35827020 chr19:35827021 nonsynonymous SNV 0.278 2 22 hPsi_associated_SNPs_25820 0 0 0 0 1 Endoplasmic reticulum 0.438718594577234 0.438718385530281 0.2415955 0 hPsi_site_19544 iPseU_CNN:0.2415955;iRNA_PseU:0 19545 chr18 10485673 10485673 1 + C A BLCA 10485672 + 10485652 10485692 41 AGGGCCACTACTACCACTACTCAGACCCGGTGTGCAAGCAC AGGGCCACTACTACCACTACTAAGACCCGGTGTGCAAGCAC < 41bp 0.474909476001615 0.833853501163788 0.23077115 0.30667597 prediction 0.667707002327577 Functional Gain - APCDD1 ENSG00000154856 CDS Human protein_coding chr18:10485672 chr18:10485673 stopgain 0.996 1 22 hPsi_associated_SNPs_25821 0 0 0 0 0 Cytosol 0.438719018415308 0.438718593205947 0 0 hPsi_site_19545 iPseU_CNN:0;iRNA_PseU:0 19546 chrX 140994670 140994670 1 + C A UCEC 140994669 + 140994649 140994689 41 TCCTCCTCCACTTTATTGAGTCTTTTCCAGAGTTCCCCTGA TCCTCCTCCACTTTATTGAGTATTTTCCAGAGTTCCCCTGA < 41bp 0.507376286066475 0.841227726697438 0.2326422 0.3540516 prediction 0.667702881261926 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994669 chrX:140994670 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_25822 0 0 0 0 0 exosome 0.438718608239003 0.438844779441131 0 0 hPsi_site_19546 iPseU_CNN:0;iRNA_PseU:0 19547 chr1 12856070 12856070 1 + C A LUSC 12856069 + 12856049 12856089 41 AGTCAGGCAGCCCAAGAGGATCTTCATTGGCCCCACCCCCT AGTCAGGCAGCCCAAGAGGATATTCATTGGCCCCACCCCCT < 41bp 0.509717742478898 0.843561956890325 0.37916723 0.67886245 prediction 0.667688428822855 Functional Gain - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12856069 chr1:12856070 synonymous SNV . 0 22 hPsi_associated_SNPs_25823 0 0 0 0 0 unknown 0.438718581653316 0.438720325491349 0.3577249 0 hPsi_site_19547 iPseU_CNN:0.3577249;iRNA_PseU:0 19548 chr1 171765758 171765758 1 + G A LGG 171765757 + 171765737 171765777 41 TGAGATCCTGTTCTGTCAGCTGCACCCTGAGCAAAAACTTG TGAGATCCTGTTCTGTCAGCTACACCCTGAGCAAAAACTTG < 41bp 0.557504901520781 0.891348453640918 0.24242854 0.74681115 prediction 0.667687104240275 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765757 chr1:171765758 synonymous SNV . 0 22 hPsi_associated_SNPs_25824 0 0 1 1 0 Ribosome 0.437984734234901 0.438464180621167 0.4936223 0 hPsi_site_19548 iPseU_CNN:0.4936223;iRNA_PseU:0 19549 chr6 86195126 86195126 1 + C A UCEC 86195125 + 86195105 86195145 41 TCTTCCCATGGAAATCCCATTCTTCTAAACAGCAGCATTCC TCTTCCCATGGAAATCCCATTATTCTAAACAGCAGCATTCC < 41bp 0.526390443365664 0.860232796559418 0.22871244 0.26054406 prediction 0.667684706387509 Functional Gain - NT5E ENSG00000135318 CDS Human protein_coding chr6:86195125 chr6:86195126 nonsynonymous SNV 0.965 1 22 hPsi_associated_SNPs_25825 0 0 1 0 1 nucleus 0.438634339371561 0.437409250704326 0 0 hPsi_site_19549 iPseU_CNN:0;iRNA_PseU:0 19550 chr2 79350045 79350045 1 + C A LUSC 79350044 + 79350024 79350064 41 GGAGCCCCAAGCAGTGTTAATCCTGGCTACTGTGTGAGCCT GGAGCCCCAAGCAGTGTTAATACTGGCTACTGTGTGAGCCT < 41bp 0.475937132754342 0.833837640278577 0.1711855 0.24647442 prediction 0.667675280557154 Functional Gain - REG1A ENSG00000115386 CDS Human protein_coding chr2:79350044 chr2:79350045 nonsynonymous SNV 0.104 0 22 hPsi_associated_SNPs_25826 0 0 0 0 2 Ribosome 0.438718587263902 0.438717153295778 0 0 hPsi_site_19550 iPseU_CNN:0;iRNA_PseU:0 19551 chr19 36365520 36365520 1 + G A UCEC 36365519 + 36365499 36365539 41 ATCAACGACCAGCGCCGGGCTGCCTTGGAGGGCTTCCTGGC ATCAACGACCAGCGCCGGGCTACCTTGGAGGGCTTCCTGGC < 41bp 0.569108240084132 0.902945237201732 0.18939802 0.2969156 prediction 0.667673994235201 Functional Gain - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36365519 chr19:36365520 nonsynonymous SNV 0.422 2 22 hPsi_associated_SNPs_25827 0 0 1 0 1 Endoplasmic reticulum 0.438719214399223 0.438719740430298 0 0 hPsi_site_19551 iPseU_CNN:0;iRNA_PseU:0 19552 chr7 128097334 128097334 1 + G A rs114282780 128097333 + 128097313 128097353 41 CCTTTCAGCCATGAAGCATGTGTTGAACCTCTACCTGTTAG CCTTTCAGCCATGAAGCATGTATTGAACCTCTACCTGTTAG < 41bp 0.439590485534146 0.833829228672667 0.4349839 0.6719821 prediction 0.667658457345335 Functional Gain - HILPDA ENSG00000135245 CDS Human protein_coding chr7:128097333 chr7:128097334 synonymous SNV . 0 22 hPsi_associated_SNPs_25828 0 0 1 0 0 Ribosome 0.438710965559212 0.438735055646595 0.3439642 0 hPsi_site_19552 iPseU_CNN:0.3439642;iRNA_PseU:0 19553 chr14 70171367 70171367 1 + G T SARC 70171366 + 70171346 70171386 41 GGTCCCCACGCTGTCTATAGTGGCTTCTACTGCCAGCTCCG GGTCCCCACGCTGTCTATAGTTGCTTCTACTGCCAGCTCCG < 41bp 0.49984670802207 0.833823391136886 0.15143394 0.21679395 prediction 0.667646782273771 Functional Gain - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70171366 chr14:70171367 synonymous SNV . 0 22 hPsi_associated_SNPs_25829 0 0 1 0 2 Endoplasmic reticulum 0.438718582341426 0.438718611524138 0 0 hPsi_site_19553 iPseU_CNN:0;iRNA_PseU:0 19554 chr2 42280493 42280493 1 + C A GBM 42280492 + 42280472 42280512 41 CTGCAAACTTCCTGGGAGGATCGATTCCGAGTGAGCTCAGA CTGCAAACTTCCTGGGAGGATAGATTCCGAGTGAGCTCAGA < 41bp 0.512553790607884 0.846376824098041 0.9713025 0.8067993 prediction 0.667646066980315 Functional Gain - PKDCC ENSG00000162878 CDS Human protein_coding chr2:42280492 chr2:42280493 synonymous SNV . 0 22 hPsi_associated_SNPs_25830 0 0 1 0 1 chromatin 0.438715066648972 0.438718594892593 0 0 hPsi_site_19554 iPseU_CNN:0;iRNA_PseU:0 19555 chr22 31484880 31484880 1 + G A rs116058461 31484879 + 31484859 31484899 41 TGCCACCTTGGCTGGGAGGTTGTACAGCGGGCGTCCCAACA TGCCACCTTGGCTGGGAGGTTATACAGCGGGCGTCCCAACA < 41bp 0.563740405893478 0.897562289354331 0.4322271 0.71618116 prediction 0.667643766921705 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31484879 chr22:31484880 synonymous SNV . 0 22 hPsi_associated_SNPs_25831 0 0 1 0 2 Cytosol 0.43886397104655 0.438643277610064 0.43236232 0 hPsi_site_19555 iPseU_CNN:0.43236232;iRNA_PseU:0 19556 chr22 17517668 17517668 1 + G A rs555476868 17517667 + 17517647 17517687 41 CACAGGACGAATGTAGACGGTGAGGCCAAGGACGCCCTGCT CACAGGACGAATGTAGACGGTAAGGCCAAGGACGCCCTGCT < 41bp 0.474198479843115 0.833820856102886 0.33055252 0.60999703 prediction 0.667641712205771 Functional Gain - CECR7 ENSG00000237438 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17517667 chr22:17517668 . . 0 22 hPsi_associated_SNPs_25832 0 0 0 0 0 unknown 0.43871861110454 0.43871859217119 0.21999406 0 hPsi_site_19556 iPseU_CNN:0.21999406;iRNA_PseU:0 19557 chr16 3191066 3191066 1 + G A STAD 3191065 + 3191045 3191085 41 CCTGGTGCGCCACCAAGGCGTGCACACGGGCGAGAAGCCCT CCTGGTGCGCCACCAAGGCGTACACACGGGCGAGAAGCCCT < 41bp 0.531449532793544 0.865269840960365 0.30660647 0.7574111 prediction 0.667640616333643 Functional Gain - ZNF213 ENSG00000085644 CDS Human protein_coding chr16:3191065 chr16:3191066 synonymous SNV . 0 22 hPsi_associated_SNPs_25833 0 0 1 0 0 chromatin 0.439276718866783 0.442088337634813 0.5148222 0 hPsi_site_19557 iPseU_CNN:0.5148222;iRNA_PseU:0 19558 chr5 140856716 140856716 1 + G A GBM 140856715 + 140856695 140856735 41 GTGTTGGTGGAGGTTGTGGATGTGAATGACAACGCCCCGGA GTGTTGGTGGAGGTTGTGGATATGAATGACAACGCCCCGGA < 41bp 0.444164423273195 0.833819211037774 0.30076015 0.55337965 prediction 0.667638422075548 Functional Gain - PCDHGC3 ENSG00000240184 CDS Human protein_coding chr5:140856715 chr5:140856716 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_25834 0 0 0 0 0 Cytosol 0.437570375405763 0.437945815154462 0.1067593 0 hPsi_site_19558 iPseU_CNN:0.1067593;iRNA_PseU:0 19559 chr9 125273794 125273794 1 + G A rs150280924 125273793 + 125273773 125273813 41 CAAAGGGATCCACAAAGCATTGTCCACATGTGGCTCCCATC CAAAGGGATCCACAAAGCATTATCCACATGTGGCTCCCATC < 41bp 0.553237994231814 0.887053910007194 0.3567955 0.64150023 prediction 0.66763183155076 Functional Gain - OR1J2 ENSG00000197233 CDS Human protein_coding chr9:125273793 chr9:125273794 synonymous SNV . 0 22 hPsi_associated_SNPs_25835 0 0 0 0 0 exosome 0.438451953590996 0.438685710439063 0.28300046 0 hPsi_site_19559 iPseU_CNN:0.28300046;iRNA_PseU:0 19560 chr1 154548880 154548880 1 + G A rs2072661 154548879 + 154548859 154548899 41 GGGGAAGAGAGAGGCCTGGGTGTGACCTGACACCTGCCGCT GGGGAAGAGAGAGGCCTGGGTATGACCTGACACCTGCCGCT < 41bp 0.477514080313842 0.833807899040876 0.2516551 0.54741484 prediction 0.667615798081751 Functional Gain - CHRNB2 ENSG00000160716 UTR3 Human protein_coding chr1:154548879 chr1:154548880 . . 0 22 hPsi_associated_SNPs_25836 1 0 0 0 0 nucleus 0.438709022023391 0.43870331100501 0.0948296799999999 0 hPsi_site_19560 iPseU_CNN:0.0948296799999999;iRNA_PseU:0 19561 chr11 64368285 64368285 1 + C A UCEC 64368284 + 64368264 64368304 41 TCTGGTCCGGCTGCTGGGTGTCCATGGCCCCTGGCTGCCCT TCTGGTCCGGCTGCTGGGTGTACATGGCCCCTGGCTGCCCT < 41bp 0.525769783592175 0.859576756803631 0.41148362 0.7486778 prediction 0.667613946422913 Functional Gain - SLC22A12 ENSG00000197891 CDS Human protein_coding chr11:64368284 chr11:64368285 synonymous SNV . 0 22 hPsi_associated_SNPs_25837 0 0 0 0 1 unknown 0.438718592994981 0.438718592995102 0.4973556 0 hPsi_site_19561 iPseU_CNN:0.4973556;iRNA_PseU:0 19562 chr4 57179426 57179426 1 + G A UCEC 57179425 + 57179405 57179445 41 TCTGCTGGCACCATCGAAAGTGTCAACTTAGATGCCATCCC TCTGCTGGCACCATCGAAAGTATCAACTTAGATGCCATCCC < 41bp 0.415284561767932 0.833806738413184 0.41134387 0.62571084 prediction 0.667613476826368 Functional Gain - KIAA1211 ENSG00000109265 CDS Human protein_coding chr4:57179425 chr4:57179426 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25838 0 0 0 0 1 cytosol 0.439364147956916 0.438762203656964 0.25142168 0 hPsi_site_19562 iPseU_CNN:0.25142168;iRNA_PseU:0 19563 chr20 31024599 31024599 1 + G A UCEC 31024598 + 31024578 31024618 41 GACTGGGCTCCAAAGCCACATGCCTTTGTTGGCAGCGTCAA GACTGGGCTCCAAAGCCACATACCTTTGTTGGCAGCGTCAA < 41bp 0.441491978478169 0.833804965053224 0.2542119 0.39040074 prediction 0.667609930106449 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024598 chr20:31024599 nonsynonymous SNV 0.047 1 22 hPsi_associated_SNPs_25839 0 0 1 0 0 Nucleus 0.425779931446397 0.434266237179165 0 0 hPsi_site_19563 iPseU_CNN:0;iRNA_PseU:0 19564 chr5 140516178 140516178 1 + C A LUSC 140516177 + 140516157 140516197 41 ATTTGCTCCATCCAGAATGATCTCCCCTTTCTTTTGAAGCC ATTTGCTCCATCCAGAATGATATCCCCTTTCTTTTGAAGCC < 41bp 0.508587193284078 0.842387555774182 0.40402347 0.5464932 prediction 0.667600724980209 Functional Gain - PCDHB5 ENSG00000113209 CDS Human protein_coding chr5:140516177 chr5:140516178 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_25840 0 0 0 0 0 Endoplasmic reticulum 0.438718039603275 0.438718592138362 0.0929864 0 hPsi_site_19564 iPseU_CNN:0.0929864;iRNA_PseU:0 19565 chr18 59206330 59206330 1 + C A COAD 59206329 + 59206309 59206349 41 GAATGACAATGCTCCAGAGTTCCCCAGATTCTATGAAGCTT GAATGACAATGCTCCAGAGTTACCCAGATTCTATGAAGCTT < 41bp 0.476716813918015 0.833798022734922 0.24348432 0.5463415 prediction 0.667596045469843 Functional Gain - CDH20 ENSG00000101542 CDS Human protein_coding chr18:59206329 chr18:59206330 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_25841 0 0 0 0 2 nucleus 0.438723977224413 0.43843692823202 0.0926830000000001 0 hPsi_site_19565 iPseU_CNN:0.0926830000000001;iRNA_PseU:0 19566 chr7 94293201 94293201 1 + C A UCEC 94293200 + 94293180 94293220 41 GGAAAAGAGCACCAGGGATTTCTCAGTTGATCGTGTCCGTG GGAAAAGAGCACCAGGGATTTATCAGTTGATCGTGTCCGTG < 41bp 0.527912420144232 0.86170259247535 0.24828279 0.48546886 prediction 0.667580344662236 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293200 chr7:94293201 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_25842 0 0 1 0 0 Endoplasmic reticulum 0.438718082783788 0.438715232309381 0 0 hPsi_site_19566 iPseU_CNN:0;iRNA_PseU:0 19567 chr20 42972036 42972036 1 + C A PRAD 42972035 + 42972015 42972055 41 AGGTACCGGTCCGTAGTGGATCTCATGAAGTCCTGGTCTGA AGGTACCGGTCCGTAGTGGATATCATGAAGTCCTGGTCTGA < 41bp 0.52451891498136 0.858307988569017 0.32648525 0.41896588 prediction 0.667578147175315 Functional Gain - R3HDML ENSG00000101074 CDS Human protein_coding chr20:42972035 chr20:42972036 nonsynonymous SNV 0.039 0 22 hPsi_associated_SNPs_25843 0 0 0 0 1 cytosol 0.43872919155991 0.439842282970798 0 0 hPsi_site_19567 iPseU_CNN:0;iRNA_PseU:0 19568 chr17 72923327 72923327 1 + C A COAD 72923326 + 72923306 72923346 41 CTCTCCATACAGACCTACTTTCTCTGGGTCTCTGCTAAAGA CTCTCCATACAGACCTACTTTATCTGGGTCTCTGCTAAAGA < 41bp 0.525503239402068 0.859289575250675 0.56446266 0.6331223 prediction 0.667572671697212 Functional Gain - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72923326 chr17:72923327 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_25844 0 0 0 0 2 exosome 0.438722231642579 0.438718936672518 0.13731928 0 hPsi_site_19568 iPseU_CNN:0.13731928;iRNA_PseU:0 19569 chr15 24921716 24921716 1 + G A LIHC 24921715 + 24921695 24921735 41 GTCTCCAGCGAGCTCCTGCTTGGAAGGCCCTGCCATGCCCA GTCTCCAGCGAGCTCCTGCTTAGAAGGCCCTGCCATGCCCA < 41bp 0.445730780214194 0.833784312885594 0.32781357 0.5053136 prediction 0.667568625771188 Functional Gain - NPAP1 ENSG00000185823 CDS Human protein_coding chr15:24921715 chr15:24921716 synonymous SNV . 0 22 hPsi_associated_SNPs_25845 0 0 0 0 0 Nucleus 0.438718592995014 0.438718592995102 0.0106272000000001 0 hPsi_site_19569 iPseU_CNN:0.0106272000000001;iRNA_PseU:0 19570 chr20 57428467 57428467 1 + G A ESCA 57428466 + 57428446 57428486 41 GCCTAGCCCAGCCGAAGAGATGGAGACCGAACCGCCTCACA GCCTAGCCCAGCCGAAGAGATAGAGACCGAACCGCCTCACA < 41bp 0.443714532152475 0.833783012221607 0.48468024 0.655467 prediction 0.667566024443213 Functional Gain - GNAS ENSG00000087460 CDS Human protein_coding chr20:57428466 chr20:57428467 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25846 0 0 0 0 0 Cytosol 0.438718594161428 0.438718838056383 0.310934 0 hPsi_site_19570 iPseU_CNN:0.310934;iRNA_PseU:0 19571 chr1 47905169 47905169 1 + G A COAD 47905168 + 47905148 47905188 41 CCAAGCCCAGGTCTTGGCCATGCTGACTGCTCCGGCCCTGG CCAAGCCCAGGTCTTGGCCATACTGACTGCTCCGGCCCTGG < 41bp 0.537724728294669 0.871507471704282 0.33311182 0.6419059 prediction 0.667565486819228 Functional Gain - FOXD2 ENSG00000186564 CDS Human protein_coding chr1:47905168 chr1:47905169 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_25847 0 0 1 0 0 chromatin 0.438720992682867 0.438704906833638 0.2838118 0 hPsi_site_19571 iPseU_CNN:0.2838118;iRNA_PseU:0 19572 chr4 1388944 1388944 1 + G A rs200759023 1388943 + 1388923 1388963 41 TGCCTGCTCACACGTGCCCATGTGGAGTGTTCGCCTGCTCA TGCCTGCTCACACGTGCCCATATGGAGTGTTCGCCTGCTCA < 41bp 0.46938580364611 0.833780905118102 0.29757756 0.31202036 prediction 0.667561810236205 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388943 chr4:1388944 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_25848 0 0 0 0 0 chromatin 0.438834482949351 0.438760729175545 0 0 hPsi_site_19572 iPseU_CNN:0;iRNA_PseU:0 19573 chr7 149422538 149422538 1 + C A LIHC 149422537 + 149422517 149422557 41 CCCAGCCAGGAGACTCTAGGTCTCAGAAGCCTGAACTGCAA CCCAGCCAGGAGACTCTAGGTATCAGAAGCCTGAACTGCAA < 41bp 0.534249338972959 0.868028835503345 0.2605974 0.4191694 prediction 0.667558993060771 Functional Gain - KRBA1 ENSG00000133619 CDS Human protein_coding chr7:149422537 chr7:149422538 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25849 0 0 0 0 1 Cytosol 0.438761462788178 0.438724864321592 0 0 hPsi_site_19573 iPseU_CNN:0;iRNA_PseU:0 19574 chr20 2397915 2397915 1 + G A UCEC 2397914 + 2397894 2397934 41 GCAGGTGTACAGCAAGGCGGTGAACAGGCTGTTCGGCGTGG GCAGGTGTACAGCAAGGCGGTAAACAGGCTGTTCGGCGTGG < 41bp 0.421019182079756 0.833777824409328 0.28480217 0.4399804 prediction 0.667555648818655 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2397914 chr20:2397915 synonymous SNV . 0 22 hPsi_associated_SNPs_25850 0 0 0 0 0 exosome 0.438457974070263 0.436870891074888 0 0 hPsi_site_19574 iPseU_CNN:0;iRNA_PseU:0 19575 chr18 13826367 13826367 1 + G A BLCA 13826366 + 13826346 13826386 41 CTTCGCTATGCTGTTCCTCCTGGTGTCTCTGTACATACACA CTTCGCTATGCTGTTCCTCCTAGTGTCTCTGTACATACACA < 41bp 0.439838845600166 0.833776104395217 0.26162106 0.30405772 prediction 0.667552208790434 Functional Gain - MC5R ENSG00000176136 CDS Human protein_coding chr18:13826366 chr18:13826367 synonymous SNV . 0 22 hPsi_associated_SNPs_25851 0 0 0 0 0 unknown 0.438712606825569 0.438686601304105 0 0 hPsi_site_19575 iPseU_CNN:0;iRNA_PseU:0 19576 chr11 46403634 46403634 1 + C A CESC 46403633 + 46403613 46403653 41 GCACCGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGG GCACCGAGGCTTCCTCCTCCTAACCCTCCTCGCCCTGCTGG < 41bp 0.482063060472965 0.83377146689521 0.2386306 0.74288344 prediction 0.66754293379042 Functional Gain - MDK ENSG00000110492 CDS Human protein_coding chr11:46403633 chr11:46403634 synonymous SNV . 0 22 hPsi_associated_SNPs_25852 0 0 1 0 2 Ribosome 0.438718273662284 0.438705572445274 0.48576688 0 hPsi_site_19576 iPseU_CNN:0.48576688;iRNA_PseU:0 19577 chr22 29837872 29837872 1 + G T UCEC 29837873 - 29837853 29837893 41 CCACTCGCTGTAACTTGCGGTCTACGAAGAGGAAAGTCAGC CCACTCGCTGTAACTTGCGGTATACGAAGAGGAAAGTCAGC < 41bp 0.508810787985427 0.842579891737743 0.29991102 0.52899337 prediction 0.667538207504631 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837873 chr22:29837872 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_25853 0 0 0 0 0 exosome 0.438705979394519 0.438717695417774 0.05798674 0 hPsi_site_19577 iPseU_CNN:0.05798674;iRNA_PseU:0 19578 chr7 30651816 30651816 1 + C A UCEC 30651815 + 30651795 30651835 41 CTGCTGCCCAGATTGGAAATTCTTTTAGAAATGAGATCTCC CTGCTGCCCAGATTGGAAATTATTTTAGAAATGAGATCTCC < 41bp 0.475054550346278 0.833768841119816 0.28208154 0.29918778 prediction 0.667537682239633 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30651815 chr7:30651816 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25854 0 0 1 0 1 Cytosol 0.438718592994898 0.438718592995621 0 0 hPsi_site_19578 iPseU_CNN:0;iRNA_PseU:0 19579 chrX 152686858 152686858 1 + G A UCEC 152686857 + 152686837 152686877 41 CCTCAGCCAGCACCGGCGCGTGCACAGCGGTGAGAAGCCCT CCTCAGCCAGCACCGGCGCGTACACAGCGGTGAGAAGCCCT < 41bp 0.459365251359626 0.833768250574199 0.25071523 0.43227288 prediction 0.667536501148397 Functional Gain - ZFP92 ENSG00000189420 CDS Human protein_coding chrX:152686857 chrX:152686858 synonymous SNV . 0 22 hPsi_associated_SNPs_25855 0 0 0 0 0 nucleolus 0.438718242398688 0.438673101125881 0 0 hPsi_site_19579 iPseU_CNN:0;iRNA_PseU:0 19580 chr16 30095063 30095063 1 + G A BLCA 30095062 + 30095042 30095082 41 CGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCT CGAAAGCAAGAGGTGCCTCATAATGGGCCCATGTGTGACCT < 41bp 0.424783871117249 0.833767180795899 0.21492538 0.3424985 prediction 0.667534361591797 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30095062 chr16:30095063 nonsynonymous SNV 0.977 2 22 hPsi_associated_SNPs_25856 0 0 1 1 2 Ribosome 0.444654572358233 0.439915970451504 0 0 hPsi_site_19580 iPseU_CNN:0;iRNA_PseU:0 19581 chr1 155034421 155034421 1 + G A LUSC 155034420 + 155034400 155034440 41 CAATCCCCCTACCCGCCCTCTGCCCGCTGACCCGGTGGTGA CAATCCCCCTACCCGCCCTCTACCCGCTGACCCGGTGGTGA < 41bp 0.452020071698465 0.833766140234902 0.22125971 0.68980265 prediction 0.667532280469803 Functional Gain - ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155034420 chr1:155034421 synonymous SNV . 0 22 hPsi_associated_SNPs_25857 0 0 1 0 2 Ribosome 0.438599361430057 0.438529464546041 0.3796053 0 hPsi_site_19581 iPseU_CNN:0.3796053;iRNA_PseU:0 19582 chr4 38690369 38690369 1 + C A HNSC 38690368 + 38690348 38690388 41 ACAAGCGGAGTTCACCCCCTTCGGCTGGGAATTCGCCCTCC ACAAGCGGAGTTCACCCCCTTAGGCTGGGAATTCGCCCTCC < 41bp 0.466939032652634 0.833762498808395 0.33454418 0.43253368 prediction 0.667524997616791 Functional Gain - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38690368 chr4:38690369 stopgain 0.002 0 22 hPsi_associated_SNPs_25858 0 0 1 0 0 Cytosol 0.438718592995102 0.438718592995091 0 0 hPsi_site_19582 iPseU_CNN:0;iRNA_PseU:0 19583 chr22 50647098 50647098 1 + G A rs201931616 50647097 + 50647077 50647117 41 TTTTACCCCGAGATCCAGGCTGCTCATGCCAGCGACAGCGT TTTTACCCCGAGATCCAGGCTACTCATGCCAGCGACAGCGT < 41bp 0.563901297067849 0.897661740687412 0.18733808 0.23824832 prediction 0.667520887239127 Functional Gain - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50647097 chr22:50647098 unknown 0.314 0 22 hPsi_associated_SNPs_25859 0 0 1 0 1 Nucleus 0.43868440250359 0.438812646155729 0 0 hPsi_site_19583 iPseU_CNN:0;iRNA_PseU:0 19584 chr1 171526425 171526425 1 + C A UCEC 171526424 + 171526404 171526444 41 AAAAAGGAAGAAGCCAGACTTCTAAGCTTCCTCCAAGATTT AAAAAGGAAGAAGCCAGACTTATAAGCTTCCTCCAAGATTT < 41bp 0.500578597597578 0.834337816429188 0.4336109 0.34408057 prediction 0.667518437663219 Functional Gain - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171526424 chr1:171526425 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25860 0 0 1 0 0 Cytosol 0.438711712865638 0.438717875613646 0 0 hPsi_site_19584 iPseU_CNN:0;iRNA_PseU:0 19585 chr19 19168673 19168673 1 + G A rs79944472 19168672 + 19168652 19168692 41 GTCCCAGCCAGCAGCACGGATGTTACTGTCCTGCTCCTTCC GTCCCAGCCAGCAGCACGGATATTACTGTCCTGCTCCTTCC < 41bp 0.532954558157652 0.866711315590446 0.25077018 0.34400436 prediction 0.667513514865588 Functional Gain - ARMC6 ENSG00000105676 UTR3 Human protein_coding chr19:19168672 chr19:19168673 . . 0 22 hPsi_associated_SNPs_25861 0 0 1 0 0 Ribosome 0.438716974335154 0.43871196886417 0 0 hPsi_site_19585 iPseU_CNN:0;iRNA_PseU:0 19586 chr1 8385362 8385362 1 + C A UCEC 8385361 + 8385341 8385381 41 GGCCTGCTCTGTTTCAGGATTCCTACTGCAGCCTCTGTTGG GGCCTGCTCTGTTTCAGGATTACTACTGCAGCCTCTGTTGG < 41bp 0.523681249753447 0.857437193212809 0.2993374 0.74552083 prediction 0.667511886918724 Functional Gain - SLC45A1 ENSG00000162426 CDS Human protein_coding chr1:8385361 chr1:8385362 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_25862 0 0 0 0 2 exosome 0.438718543105828 0.43871859327827 0.49104166 0 hPsi_site_19586 iPseU_CNN:0.49104166;iRNA_PseU:0 19587 chr7 73790474 73790474 1 + C A LUAD 73790473 + 73790453 73790493 41 CCAGGCGGAGGTGGACAAGCTCCGCGCGGCCAACGAGAAGT CCAGGCGGAGGTGGACAAGCTACGCGCGGCCAACGAGAAGT < 41bp 0.467922287715118 0.833754980991771 0.24774835 0.77799046 prediction 0.667509961983542 Functional Gain - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790473 chr7:73790474 synonymous SNV . 0 22 hPsi_associated_SNPs_25863 0 0 0 0 0 Ribosome 0.4387185931575 0.438718592995076 0.55598092 0 hPsi_site_19587 iPseU_CNN:0.55598092;iRNA_PseU:0 19588 chr2 127453717 127453717 1 + G A BLCA 127453716 + 127453696 127453736 41 GCAGAAAGGAGTACTTTATTTGAGGGACAACAGACTTCACT GCAGAAAGGAGTACTTTATTTAAGGGACAACAGACTTCACT < 41bp 0.552373262553203 0.886120005240074 0.23930556 0.5644842 prediction 0.667493485373743 Functional Gain - GYPC ENSG00000136732 CDS Human protein_coding chr2:127453716 chr2:127453717 synonymous SNV . 0 22 hPsi_associated_SNPs_25864 0 0 1 0 0 Endoplasmic reticulum 0.438718995773154 0.438718550025655 0.1289684 0 hPsi_site_19588 iPseU_CNN:0.1289684;iRNA_PseU:0 19589 chr19 4029001 4029001 1 + G A GBM 4029000 + 4028980 4029020 41 CTGCAGAGGCTGAAGACCATTGGGGTAAAGCACCCGGAGCT CTGCAGAGGCTGAAGACCATTAGGGTAAAGCACCCGGAGCT < 41bp 0.420092167504626 0.833741952472734 0.3036727 0.47355106 prediction 0.667483904945468 Functional Gain - PIAS4 ENSG00000105229 CDS Human protein_coding chr19:4029000 chr19:4029001 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_25865 0 0 1 0 2 chromatin 0.4387185929951 0.438718592585488 0 0 hPsi_site_19589 iPseU_CNN:0;iRNA_PseU:0 19590 chr5 96328800 96328800 1 + C A LUSC 96328799 + 96328779 96328819 41 GTGAAGCTTCTTGAGTTTTTTCAAAACTACTTTGAAATTCA GTGAAGCTTCTTGAGTTTTTTAAAAACTACTTTGAAATTCA < 41bp 0.51001569194776 0.843754139470853 0.37231734 0.34777355 prediction 0.667476895046185 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96328799 chr5:96328800 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25866 0 0 0 0 2 Endoplasmic reticulum 0.438767080469635 0.441290289930806 0 0 hPsi_site_19590 iPseU_CNN:0;iRNA_PseU:0 19591 chr2 190332264 190332264 1 + C A GBM 190332263 + 190332243 190332283 41 TCAAGCAACTAACTGTTGTTTCTCCGAAGATGGTTCTTTAC TCAAGCAACTAACTGTTGTTTATCCGAAGATGGTTCTTTAC < 41bp 0.482176591260178 0.833730602596953 0.32839334 0.51228493 prediction 0.667461205193905 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190332263 chr2:190332264 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25867 0 0 1 0 1 Nucleus 0.438717584612918 0.438718592993913 0.0245698599999999 0 hPsi_site_19591 iPseU_CNN:0.0245698599999999;iRNA_PseU:0 19592 chr16 89623933 89623933 1 + G A rs545177317 89623932 + 89623912 89623952 41 GATCGGACATGAAAGGACCCTGTGAGCCGATTGTCCTATCT GATCGGACATGAAAGGACCCTATGAGCCGATTGTCCTATCT < 41bp 0.525275181690833 0.859003803301011 0.2065818 0.25346783 prediction 0.667457243220357 Functional Gain - SPG7 ENSG00000197912 UTR3 Human protein_coding chr16:89623932 chr16:89623933 . . 0 22 hPsi_associated_SNPs_25868 1 0 1 0 0 Nucleus 0.438709316252222 0.438718449591116 0 0 hPsi_site_19592 iPseU_CNN:0;iRNA_PseU:0 19593 chr17 26669323 26669323 1 + C A UCEC 26669322 + 26669302 26669342 41 TCGAGCTGTTTGACAAGCTCTCCCTGCGCTTCAACGGCCGC TCGAGCTGTTTGACAAGCTCTACCTGCGCTTCAACGGCCGC < 41bp 0.542839289308526 0.876566914087032 0.14964658 0.6097169 prediction 0.667455249557014 Functional Gain - TNFAIP1 ENSG00000109079 CDS Human protein_coding chr17:26669322 chr17:26669323 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_25869 0 0 1 0 1 Ribosome 0.438700763074204 0.438708550154938 0.2194338 0 hPsi_site_19593 iPseU_CNN:0.2194338;iRNA_PseU:0 19594 chr19 40276728 40276728 1 + C A UCEC 40276727 + 40276707 40276747 41 ACCAGCAGCCTAAATCAATATCTTTTTCCAGTATGCCTTGA ACCAGCAGCCTAAATCAATATATTTTTCCAGTATGCCTTGA < 41bp 0.512462541342006 0.84617431477686 0.3019357 0.33946073 prediction 0.667423546869706 Functional Gain - LEUTX ENSG00000213921 CDS Human protein_coding chr19:40276727 chr19:40276728 nonsynonymous SNV 0.009 4 22 hPsi_associated_SNPs_25870 0 0 0 0 0 unknown 0.438718592995103 0.438718592995102 0 0 hPsi_site_19594 iPseU_CNN:0;iRNA_PseU:0 19595 chr14 31354707 31354707 1 + G A rs28362775 31354706 + 31354686 31354726 41 ATTGATGGTTGGCCTTCTGATGACATCGAGGAAGCAGGCAT ATTGATGGTTGGCCTTCTGATAACATCGAGGAAGCAGGCAT < 41bp 0.425077292117964 0.833711378801121 0.18147126 0.22839332 prediction 0.667422757602241 Functional Gain - COCH ENSG00000100473 CDS Human protein_coding chr14:31354706 chr14:31354707 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25871 2 0 1 0 0 Cytosol 0.43871877445408 0.438718596350607 0 0 hPsi_site_19595 iPseU_CNN:0;iRNA_PseU:0 19596 chr17 66518972 66518972 1 + C A BLCA 66518971 + 66518951 66518991 41 AGGGAGGATGAGATTTCTCCTCCTCCACCCAACCCAGTGGT AGGGAGGATGAGATTTCTCCTACTCCACCCAACCCAGTGGT < 41bp 0.466484858851728 0.833710123355441 0.24056661 0.4541586 prediction 0.667420246710882 Functional Gain - PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66518971 chr17:66518972 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_25872 0 0 1 0 2 Ribosome 0.438718581215217 0.438831080056091 0 0 hPsi_site_19596 iPseU_CNN:0;iRNA_PseU:0 19597 chr19 52090627 52090627 1 + C A LUAD 52090626 + 52090606 52090646 41 GGAAGGTCTTTATTCAGAGATCAGAATTGCTTACGCACCAG GGAAGGTCTTTATTCAGAGATAAGAATTGCTTACGCACCAG < 41bp 0.513430874474181 0.847139799394777 0.24806589 0.2665304 prediction 0.667417849841191 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090626 chr19:52090627 stopgain 0.812 0 22 hPsi_associated_SNPs_25873 0 0 0 0 0 chromatin 0.438718589857624 0.438718592994359 0 0 hPsi_site_19597 iPseU_CNN:0;iRNA_PseU:0 19598 chr3 39453160 39453160 1 + G A rs2269350 39453159 + 39453139 39453179 41 GGGAGCTCACTCAGTGGGTTTGATGTGGTGGATGCTGGCTC GGGAGCTCACTCAGTGGGTTTAATGTGGTGGATGCTGGCTC < 41bp 0.478176053834053 0.833703050445624 0.27236792 0.5477764 prediction 0.667406100891249 Functional Gain - RPSA ENSG00000168028 CDS Human protein_coding chr3:39453159 chr3:39453160 synonymous SNV . 0 22 hPsi_associated_SNPs_25874 1 0 0 1 1 Cytosol 0.462130454758213 0.43862869217683 0.0955528000000001 0 hPsi_site_19598 iPseU_CNN:0.0955528000000001;iRNA_PseU:0 19599 chr2 200828511 200828511 1 + G A UCEC 200828510 + 200828490 200828530 41 GACTGGACCATTGCACGGATTGAACACTCAAAATTATTAGA GACTGGACCATTGCACGGATTAAACACTCAAAATTATTAGA < 41bp 0.548869267099352 0.882572233026122 0.21852699 0.31189087 prediction 0.667405931853539 Functional Gain - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200828510 chr2:200828511 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25875 0 0 1 0 1 unknown 0.439464497401679 0.438759211162339 0 0 hPsi_site_19599 iPseU_CNN:0;iRNA_PseU:0 19600 chr5 40843735 40843735 1 + C A rs35188876 40843734 + 40843714 40843754 41 GAATTCAGAAACCACAGAGTTCTCTGGTGAAGAACCAAGTT GAATTCAGAAACCACAGAGTTATCTGGTGAAGAACCAAGTT < 41bp 0.490344858143297 0.833700150903363 0.44475594 0.6274519 prediction 0.667400301806725 Functional Gain - CARD6 ENSG00000132357 CDS Human protein_coding chr5:40843734 chr5:40843735 nonsynonymous SNV 0.128 0 22 hPsi_associated_SNPs_25876 0 0 0 0 1 exosome 0.439321417657908 0.438080461220538 0.2549038 0 hPsi_site_19600 iPseU_CNN:0.2549038;iRNA_PseU:0 19601 chr12 58002333 58002333 1 + C A UCEC 58002332 + 58002312 58002352 41 CCAAACCCAGGAGTTCGGTATCCTGGCACCACACGGGTGGC CCAAACCCAGGAGTTCGGTATACTGGCACCACACGGGTGGC < 41bp 0.533231796264939 0.866931136796077 0.29735214 0.7698519 prediction 0.667398681062278 Functional Gain - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002332 chr12:58002333 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_25877 0 0 0 0 1 exosome 0.438714411657793 0.438710071498588 0.5397038 0 hPsi_site_19601 iPseU_CNN:0.5397038;iRNA_PseU:0 19602 chr3 32200470 32200470 1 + G A STAD 32200469 + 32200449 32200489 41 CTCATGGAAATGATTGCTTTTGCCAGGATCTTCTGCAAAGG CTCATGGAAATGATTGCTTTTACCAGGATCTTCTGCAAAGG < 41bp 0.421668860359699 0.8336980166523 0.34015268 0.6488165 prediction 0.667396033304599 Functional Gain - GPD1L ENSG00000152642 CDS Human protein_coding chr3:32200469 chr3:32200470 nonsynonymous SNV 0.860 1 22 hPsi_associated_SNPs_25878 0 0 0 0 0 Cytosol 0.438720654176917 0.438719749746895 0.297633 0 hPsi_site_19602 iPseU_CNN:0.297633;iRNA_PseU:0 19603 chr4 134072498 134072498 1 + G A COAD 134072497 + 134072477 134072517 41 GTGCGAGCTACTGGGAGACGTGCCTTTCCGCCTCAAGTCTT GTGCGAGCTACTGGGAGACGTACCTTTCCGCCTCAAGTCTT < 41bp 0.428758973135902 0.833695080417439 0.15170497 0.60953826 prediction 0.667390160834879 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134072497 chr4:134072498 synonymous SNV . 0 22 hPsi_associated_SNPs_25879 0 0 0 0 0 cytosol 0.438718655990881 0.438719449572381 0.21907652 0 hPsi_site_19603 iPseU_CNN:0.21907652;iRNA_PseU:0 19604 chr11 89443555 89443555 1 + G A UCEC 89443554 + 89443534 89443574 41 CAGACCCTGTCACCATTTGTTGTGGGCACAGATTTTGTAGT CAGACCCTGTCACCATTTGTTATGGGCACAGATTTTGTAGT < 41bp 0.480541769035645 0.833693236535089 0.38721547 0.75482833 prediction 0.667386473070177 Functional Gain - TRIM77 ENSG00000214414 CDS Human protein_coding chr11:89443554 chr11:89443555 nonsynonymous SNV 0.061 1 22 hPsi_associated_SNPs_25880 0 0 0 0 0 exosome 0.43871859129571 0.438718570138038 0.50965666 0 hPsi_site_19604 iPseU_CNN:0.50965666;iRNA_PseU:0 19605 chr1 40737616 40737616 1 + C A BLCA 40737615 + 40737595 40737635 41 TGCCCCTTTATTTGACAAATTCACACCTCTGCCTGAGGGAA TGCCCCTTTATTTGACAAATTAACACCTCTGCCTGAGGGAA < 41bp 0.502774829051848 0.836464583186 0.2306844 0.3320917 prediction 0.667379508268304 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40737615 chr1:40737616 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_25881 0 0 1 0 2 Endoplasmic reticulum 0.438718593001247 0.438718592975254 0 0 hPsi_site_19605 iPseU_CNN:0;iRNA_PseU:0 19606 chr11 3428810 3428810 1 + C A UCEC 3428809 + 3428789 3428829 41 GGCACCCCAGGGGTCTGGTGTCTTCTCCAGGCAGCTCTCAG GGCACCCCAGGGGTCTGGTGTATTCTCCAGGCAGCTCTCAG < 41bp 0.514113112598116 0.847802675354205 0.43030727 0.6755852 prediction 0.667379125512178 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3428809 chr11:3428810 . . 0 22 hPsi_associated_SNPs_25882 0 0 0 0 0 unknown 0.438718592995083 0.438718591370998 0.3511704 0 hPsi_site_19606 iPseU_CNN:0.3511704;iRNA_PseU:0 19607 chr2 58358966 58358966 1 + G A SKCM 58358965 + 58358945 58358985 41 TTGTCCAGACGAAGTGACGTTGAGATCCTCGGCTACTGCAT TTGTCCAGACGAAGTGACGTTAAGATCCTCGGCTACTGCAT < 41bp 0.555900317646006 0.889589716348024 0.31564534 0.57995445 prediction 0.667378797404036 Functional Gain - VRK2 ENSG00000028116 CDS Human protein_coding chr2:58358965 chr2:58358966 nonsynonymous SNV 0.927 4 22 hPsi_associated_SNPs_25883 0 0 1 0 2 Cytosol 0.438802655919282 0.438719406473835 0.1599089 0 hPsi_site_19607 iPseU_CNN:0.1599089;iRNA_PseU:0 19608 chr5 154179521 154179521 1 + G T HNSC 154179520 + 154179500 154179540 41 AAAGACACTACCCAAGGGCCTGTCTGCCAGCCTGCCTGACC AAAGACACTACCCAAGGGCCTTTCTGCCAGCCTGCCTGACC < 41bp 0.509001660109003 0.842690978029046 0.21612 0.35887748 prediction 0.667378635840087 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179520 chr5:154179521 synonymous SNV . 0 22 hPsi_associated_SNPs_25884 0 0 1 0 1 Cytosol 0.438718592995416 0.438718592995102 0 0 hPsi_site_19608 iPseU_CNN:0;iRNA_PseU:0 19609 chr8 24775253 24775253 1 + C A GBM 24775252 + 24775232 24775272 41 GTGGAAGAGAAAGGCAAGTCTCCTGTGCCCAAGTCACCAGT GTGGAAGAGAAAGGCAAGTCTACTGTGCCCAAGTCACCAGT < 41bp 0.513700010275958 0.847384741459543 0.21860439 0.6588539 prediction 0.667369462367169 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24775252 chr8:24775253 nonsynonymous SNV 0.189 3 22 hPsi_associated_SNPs_25885 0 0 0 0 0 exosome 0.43871859006081 0.438718590812134 0.3177078 0 hPsi_site_19609 iPseU_CNN:0.3177078;iRNA_PseU:0 19610 chr16 4744678 4744678 1 + G A rs541343587 4744677 + 4744657 4744697 41 TGCGGGTGTTCAGGCTTCGTTGGGTGGACGGGGGGAGCATG TGCGGGTGTTCAGGCTTCGTTAGGTGGACGGGGGGAGCATG < 41bp 0.54227742955253 0.875959221841317 0.34970564 0.6094766 prediction 0.667363584577575 Functional Gain - NUDT16L1 ENSG00000168101 UTR3 Human protein_coding chr16:4744677 chr16:4744678 . . 0 22 hPsi_associated_SNPs_25886 0 0 1 0 0 Ribosome 0.438718593326822 0.438795985537602 0.2189532 0 hPsi_site_19610 iPseU_CNN:0.2189532;iRNA_PseU:0 19611 chr7 49842365 49842365 1 + C A UCEC 49842364 + 49842344 49842384 41 GTGAGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAG GTGAGGTGCTATGCACAGTGTAAGCGTGTCCCCAGACGGAG < 41bp 0.532537322324711 0.866218290375604 0.27882645 0.74763906 prediction 0.667361936101786 Functional Gain - VWC2 ENSG00000188730 CDS Human protein_coding chr7:49842364 chr7:49842365 stopgain 0.992 1 22 hPsi_associated_SNPs_25887 0 0 0 0 2 exosome 0.439323933818125 0.439447491414938 0.49527812 0 hPsi_site_19611 iPseU_CNN:0.49527812;iRNA_PseU:0 19612 chr6 151789520 151789520 1 + G A SKCM 151789519 + 151789499 151789539 41 TGTGATCTGTCTCTCTCAGGTGGAGAAAGTAGTTCTCAGAA TGTGATCTGTCTCTCTCAGGTAGAGAAAGTAGTTCTCAGAA < 41bp 0.443453227691816 0.833675574696264 0.23469266 0.43148184 prediction 0.667351149392528 Functional Gain - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151789519 chr6:151789520 nonsynonymous SNV 0.045 4 22 hPsi_associated_SNPs_25888 0 0 1 0 1 Ribosome 0.438718593085965 0.438708819503634 0 0 hPsi_site_19612 iPseU_CNN:0;iRNA_PseU:0 19613 chr6 142468427 142468427 1 + G A STAD 142468426 + 142468406 142468446 41 TGGTGAGTTCGGAGTAGAGATGGCCGCGCTTGCACCGCTGC TGGTGAGTTCGGAGTAGAGATAGCCGCGCTTGCACCGCTGC < 41bp 0.452615995622048 0.833674506604246 0.2697219 0.38973352 prediction 0.667349013208492 Functional Gain - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142468426 chr6:142468427 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25889 0 0 1 0 0 Ribosome 0.438703533394336 0.438718593732461 0 0 hPsi_site_19613 iPseU_CNN:0;iRNA_PseU:0 19614 chr16 3406154 3406154 1 + G A LIHC 3406153 + 3406133 3406173 41 AACCTCTCCTCCTTGGACCTTGCTTTCGCTACTAGTTCAGT AACCTCTCCTCCTTGGACCTTACTTTCGCTACTAGTTCAGT < 41bp 0.551496972011396 0.885157101386622 0.3201846 0.571735 prediction 0.667320258750451 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406153 chr16:3406154 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_25890 0 0 0 0 0 unknown 0.438714435564685 0.438718547812912 0.14347 0 hPsi_site_19614 iPseU_CNN:0.14347;iRNA_PseU:0 19615 chr13 114324068 114324068 1 + G A STAD 114324067 + 114324047 114324087 41 TTCATCGTGTCTCTGGCCTATGCGTTTGAAACCAAAGCCGA TTCATCGTGTCTCTGGCCTATACGTTTGAAACCAAAGCCGA < 41bp 0.420128817200078 0.833658152169166 0.33695242 0.61049896 prediction 0.667316304338332 Functional Gain - GRK1 ENSG00000185974 CDS Human protein_coding chr13:114324067 chr13:114324068 nonsynonymous SNV 0.316 0 22 hPsi_associated_SNPs_25891 0 0 0 0 1 exosome 0.438717900797385 0.438718606131995 0.22099792 0 hPsi_site_19615 iPseU_CNN:0.22099792;iRNA_PseU:0 19616 chr7 138482852 138482852 1 + G A HNSC 138482851 + 138482831 138482871 41 ACTCAGCACAGCCTCCAGCATGCAGCGCCTCCCCGCTGCCA ACTCAGCACAGCCTCCAGCATACAGCGCCTCCCCGCTGCCA < 41bp 0.545820035335354 0.879474091296724 0.42087483 0.72987634 prediction 0.66730811192274 Functional Gain - TMEM213 ENSG00000214128 CDS Human protein_coding chr7:138482851 chr7:138482852 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_25892 0 0 0 0 1 nucleus 0.438718580110074 0.438718560148091 0.45975268 0 hPsi_site_19616 iPseU_CNN:0.45975268;iRNA_PseU:0 19617 chr11 65339060 65339060 1 + G A COAD 65339059 + 65339039 65339079 41 CAAATACAGATGTCATGGCCTGCACACAGACAGCCCTCTTG CAAATACAGATGTCATGGCCTACACACAGACAGCCCTCTTG < 41bp 0.563043355448864 0.896693556345492 0.304676 0.547653 prediction 0.667300401793256 Functional Gain - SSSCA1 ENSG00000173465 CDS Human protein_coding chr11:65339059 chr11:65339060 nonsynonymous SNV 0.932 0 22 hPsi_associated_SNPs_25893 0 0 1 0 0 Cytosol 0.438711147075805 0.438684458304443 0.0953059999999999 0 hPsi_site_19617 iPseU_CNN:0.0953059999999999;iRNA_PseU:0 19618 chr5 68715895 68715895 1 + C A ESCA 68715894 + 68715874 68715914 41 GGTACAACTTGTTTGGATATTCACAACCGTATGGCATGGGA GGTACAACTTGTTTGGATATTAACAACCGTATGGCATGGGA < 41bp 0.480345800596404 0.833633871593907 0.35519844 0.5762085 prediction 0.667267743187814 Functional Gain - MARVELD2 ENSG00000152939 CDS Human protein_coding chr5:68715894 chr5:68715895 stopgain 0.055 0 22 hPsi_associated_SNPs_25894 0 0 1 0 1 Nucleus 0.43871870226541 0.438722865481066 0.152417 0 hPsi_site_19618 iPseU_CNN:0.152417;iRNA_PseU:0 19619 chr16 67323179 67323179 1 + G A rs192023672 67323178 + 67323158 67323198 41 CTCTACTGGGCCCTCATGCTTGCCTTTCCTGGCCCCCAGGC CTCTACTGGGCCCTCATGCTTACCTTTCCTGGCCCCCAGGC < 41bp 0.523889437234599 0.857520444864368 0.2674343 0.37011528 prediction 0.667262015259537 Functional Gain - PLEKHG4 ENSG00000196155 UTR3 Human protein_coding chr16:67323178 chr16:67323179 . . 0 22 hPsi_associated_SNPs_25895 0 0 1 1 0 Cytosol 0.438756432416502 0.438718771730125 0 0 hPsi_site_19619 iPseU_CNN:0;iRNA_PseU:0 19620 chr10 72292466 72292466 1 + C A rs145425283 72292465 + 72292445 72292485 41 GGAGCCCCATGCTGTGGCCATCCATGGTGAGGACGACTTGC GGAGCCCCATGCTGTGGCCATACATGGTGAGGACGACTTGC < 41bp 0.534526769705759 0.868156905238837 0.20756763 0.30429375 prediction 0.667260271066157 Functional Gain - PALD1 ENSG00000107719 CDS Human protein_coding chr10:72292465 chr10:72292466 synonymous SNV . 0 22 hPsi_associated_SNPs_25896 0 0 0 0 2 Ribosome 0.43866395447714 0.438908348390961 0 0 hPsi_site_19620 iPseU_CNN:0;iRNA_PseU:0 19621 chr1 206225346 206225346 1 + G A UCEC 206225345 + 206225325 206225365 41 TCCCTTCTTCAGTGTCCAGATGTGGTCCGTGTGGGACAAGA TCCCTTCTTCAGTGTCCAGATATGGTCCGTGTGGGACAAGA < 41bp 0.552835612444093 0.886457059393486 0.2718605 0.37781674 prediction 0.667242893898785 Functional Gain - AVPR1B ENSG00000198049 CDS Human protein_coding chr1:206225345 chr1:206225346 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25897 0 0 0 0 0 unknown 0.438757598180293 0.43872404320373 0 0 hPsi_site_19621 iPseU_CNN:0;iRNA_PseU:0 19622 chr18 21057003 21057003 1 + G A UCEC 21057002 + 21056982 21057022 41 TTATATCATGAATGTACGCTTGTCCATGCTGACCTCAGTGA TTATATCATGAATGTACGCTTATCCATGCTGACCTCAGTGA < 41bp 0.564233473737571 0.897853410179336 0.2525375 0.34988248 prediction 0.66723987288353 Functional Gain - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21057002 chr18:21057003 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25898 0 0 1 0 2 Ribosome 0.438702678862407 0.438893732003359 0 0 hPsi_site_19622 iPseU_CNN:0;iRNA_PseU:0 19623 chrX 57620606 57620606 1 + C A UCEC 57620605 + 57620585 57620625 41 AGTGTGGGGCCATTGGGATCTCTGGACTCTTTGGCCATGAA AGTGTGGGGCCATTGGGATCTATGGACTCTTTGGCCATGAA < 41bp 0.506068701469269 0.839684214564424 0.2785666 0.43105364 prediction 0.66723102619031 Functional Gain - ZXDB ENSG00000198455 CDS Human protein_coding chrX:57620605 chrX:57620606 nonsynonymous SNV 0.963 2 22 hPsi_associated_SNPs_25899 0 0 0 0 0 Cytosol 0.438718592995866 0.438691699349175 0 0 hPsi_site_19623 iPseU_CNN:0;iRNA_PseU:0 19624 chr1 99766487 99766487 1 + G A CESC 99766486 + 99766466 99766506 41 AAGTCCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTTGC AAGTCCTTCCCTTCTCAACATACAACCCTTGCTGCCTTTGC < 41bp 0.437336745540841 0.833614635062562 0.27192366 0.3863615 prediction 0.667229270125124 Functional Gain - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99766486 chr1:99766487 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_25900 0 0 0 0 2 exosome 0.438718590874652 0.438718574222992 0 0 hPsi_site_19624 iPseU_CNN:0;iRNA_PseU:0 19625 chr20 2413184 2413184 1 + C A COAD 2413183 + 2413163 2413203 41 GGCCTCAGTCCAGTTTGACATCACCCCCTCCAAAAGTGGCC GGCCTCAGTCCAGTTTGACATAACCCCCTCCAAAAGTGGCC < 41bp 0.522370008951895 0.855979649374677 0.18282902 0.2840564 prediction 0.667219280845562 Functional Gain - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2413183 chr20:2413184 synonymous SNV . 0 22 hPsi_associated_SNPs_25901 0 0 0 0 0 exosome 0.438716922732617 0.438718493145396 0 0 hPsi_site_19625 iPseU_CNN:0;iRNA_PseU:0 19626 chr2 170371173 170371173 1 + C A UCEC 170371172 + 170371152 170371192 41 GGGAGAGGTGGATGATAAAATCTATGTAGTTGCAGGCAAAG GGGAGAGGTGGATGATAAAATATATGTAGTTGCAGGCAAAG < 41bp 0.522093511088387 0.855700161112579 0.28770757 0.29734933 prediction 0.667213300048383 Functional Gain - KLHL41 ENSG00000163093;ENSG00000239474;ENSG00000251569 CDS Human other chr2:170371172 chr2:170371173 synonymous SNV . 0 22 hPsi_associated_SNPs_25902 0 0 0 0 2 nucleoplasm 0.438718592995404 0.438718584627473 0 0 hPsi_site_19626 iPseU_CNN:0;iRNA_PseU:0 19627 chr9 140002875 140002875 1 + C A rs34355967 140002874 + 140002854 140002894 41 CTATTCTTCCATCAACAATGTCCAGGATCCTCAGAAGCCCG CTATTCTTCCATCAACAATGTACAGGATCCTCAGAAGCCCG < 41bp 0.522442831621734 0.856047149083432 0.3133939 0.6863208 prediction 0.667208634923397 Functional Gain - MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002874 chr9:140002875 synonymous SNV . 0 22 hPsi_associated_SNPs_25903 1 0 1 1 1 Ribosome 0.438718592983227 0.438718586472254 0.3726416 0 hPsi_site_19627 iPseU_CNN:0.3726416;iRNA_PseU:0 19628 chr1 113657197 113657197 1 + C A UCEC 113657196 + 113657176 113657216 41 GCTGGTGACAGAACGACATTTCTTTGCTGCAGCCAATCAGC GCTGGTGACAGAACGACATTTATTTGCTGCAGCCAATCAGC < 41bp 0.469677568321522 0.833602331363712 0.36270133 0.36039177 prediction 0.667204662727425 Functional Gain - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113657196 chr1:113657197 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25904 0 0 1 0 0 Nucleus 0.437842804061336 0.452911711352712 0 0 hPsi_site_19628 iPseU_CNN:0;iRNA_PseU:0 19629 chr11 119206365 119206365 1 + G A UCEC 119206364 + 119206344 119206384 41 ATGCAGTGACCGGGCCTCTGTGGAGGATGACGGACGTAGTG ATGCAGTGACCGGGCCTCTGTAGAGGATGACGGACGTAGTG < 41bp 0.428602504681566 0.833601971286977 0.29187685 0.7808188 prediction 0.667203942573954 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206364 chr11:119206365 stopgain 0.999 0 22 hPsi_associated_SNPs_25905 0 0 1 0 0 chromatin 0.437544619840546 0.438698411521667 0.5616376 0 hPsi_site_19629 iPseU_CNN:0.5616376;iRNA_PseU:0 19630 chr19 36037881 36037881 1 + G A STAD 36037880 + 36037860 36037900 41 TGGGTCGGAGCCCGGGGCATTGAGTTTGACTGGAAGTACAT TGGGTCGGAGCCCGGGGCATTAAGTTTGACTGGAAGTACAT < 41bp 0.564246248627203 0.897841700679603 0.16145986 0.19333526 prediction 0.6671909041048 Functional Gain - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36037880 chr19:36037881 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25906 0 0 1 0 2 Endoplasmic reticulum 0.43871859264619 0.438718593010228 0 0 hPsi_site_19630 iPseU_CNN:0;iRNA_PseU:0 19631 chrX 114425931 114425931 1 + G A UCEC 114425930 + 114425910 114425950 41 CGCTCCCTTGATGCCAACAGTGGAGGCCGCTCGCCTGATGC CGCTCCCTTGATGCCAACAGTAGAGGCCGCTCGCCTGATGC < 41bp 0.540494046799804 0.874085107900308 0.2922582 0.41750714 prediction 0.667182122201008 Functional Gain - RBMXL3 ENSG00000175718 CDS Human protein_coding chrX:114425930 chrX:114425931 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_25907 0 0 0 0 0 exosome 0.438718313957061 0.438697310556785 0 0 hPsi_site_19631 iPseU_CNN:0;iRNA_PseU:0 19632 chr9 90342998 90342998 1 + G A LIHC 90342997 + 90342977 90343017 41 GAACATGAAGATGATTGAACTGCACAATCAGGAATACAGGG GAACATGAAGATGATTGAACTACACAATCAGGAATACAGGG < 41bp 0.427216985023048 0.833590547360042 0.27579638 0.51385546 prediction 0.667181094720084 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90342997 chr9:90342998 synonymous SNV . 0 22 hPsi_associated_SNPs_25908 0 0 1 0 2 Ribosome 0.438654632582358 0.449840938938979 0.0277109200000001 0 hPsi_site_19632 iPseU_CNN:0.0277109200000001;iRNA_PseU:0 19633 chr5 140559508 140559508 1 + G A BLCA 140559507 + 140559487 140559527 41 GGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCA GGTGCGCACCGCCAGGCTGCTAAGCGAGCGCGACGCGGCCA < 41bp 0.55210742015764 0.885696132058653 0.27877945 0.6554104 prediction 0.667177423802026 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140559507 chr5:140559508 synonymous SNV . 0 22 hPsi_associated_SNPs_25909 0 0 0 0 0 exosome 0.437217050996118 0.438781591325937 0.3108208 0 hPsi_site_19633 iPseU_CNN:0.3108208;iRNA_PseU:0 19634 chr18 11884569 11884569 1 + C T UCEC 11884570 - 11884550 11884590 41 TGCTACCTCCCACGTGAGGATGTGGTTTTGATCATCTACTG TGCTACCTCCCACGTGAGGATATGGTTTTGATCATCTACTG < 41bp 0.561338755236507 0.894923725816581 0.23605904 0.48271707 prediction 0.66716994116015 Functional Gain - MPPE1 ENSG00000154889 CDS Human protein_coding chr18:11884570 chr18:11884569 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_25910 0 0 1 0 0 Endoplasmic reticulum 0.438710447497975 0.438565532176875 0 0 hPsi_site_19634 iPseU_CNN:0;iRNA_PseU:0 19635 chr1 156836706 156836706 1 + C A STAD 156836705 + 156836685 156836725 41 TGTCTCCACGCCCGCAGGAATCTCTCCTTCAACGCTCTGGA TGTCTCCACGCCCGCAGGAATATCTCCTTCAACGCTCTGGA < 41bp 0.485178474658146 0.833582943133666 0.5908311 0.67156696 prediction 0.667165886267332 Functional Gain - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156836705 chr1:156836706 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_25911 0 0 1 0 2 chromatin 0.438723196991033 0.438718744744373 0.16147172 0 hPsi_site_19635 iPseU_CNN:0.16147172;iRNA_PseU:0 19636 chr12 95694302 95694302 1 + G A rs61735397 95694301 + 95694281 95694321 41 GAGGCTGGCACGGCTACAGCTGTCACCAGATTTTACCTTCA GAGGCTGGCACGGCTACAGCTATCACCAGATTTTACCTTCA < 41bp 0.549912599657261 0.883492346157103 0.23351872 0.40685922 prediction 0.667159492999684 Functional Gain - VEZT ENSG00000028203 CDS Human protein_coding chr12:95694301 chr12:95694302 synonymous SNV . 0 22 hPsi_associated_SNPs_25912 0 0 1 0 0 Endoplasmic reticulum 0.438718591763786 0.438718576297054 0 0 hPsi_site_19636 iPseU_CNN:0;iRNA_PseU:0 19637 chr13 111995233 111995233 1 + C A GBM 111995232 + 111995212 111995252 41 AAGCCTGCGAGTCCTGGGCCTCCAAGTGCTGGGCCCTCGAT AAGCCTGCGAGTCCTGGGCCTACAAGTGCTGGGCCCTCGAT < 41bp 0.514790185828907 0.848365622333918 0.36288807 0.6427782 prediction 0.667150873010022 Functional Gain - TEX29 ENSG00000153495 CDS Human protein_coding chr13:111995232 chr13:111995233 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25913 0 0 0 0 1 exosome 0.438720278771542 0.438719164906743 0.2855564 0 hPsi_site_19637 iPseU_CNN:0.2855564;iRNA_PseU:0 19638 chr7 300159 300159 1 + G A rs182516015 300158 + 300138 300178 41 CTTGGGAAGGAAGCGCTGTCTGTGCTCACGGACAGAGGCGG CTTGGGAAGGAAGCGCTGTCTATGCTCACGGACAGAGGCGG < 41bp 0.544114403871592 0.877685186717169 0.31544775 0.44664606 prediction 0.667141565691153 Functional Gain - FAM20C ENSG00000177706 UTR3 Human protein_coding chr7:300158 chr7:300159 . . 0 22 hPsi_associated_SNPs_25914 0 0 1 0 0 Ribosome 0.438718474650013 0.438718506354949 0 0 hPsi_site_19638 iPseU_CNN:0;iRNA_PseU:0 19639 chr20 30659523 30659523 1 + G A CESC 30659522 + 30659502 30659542 41 GGCAATACATTCTCAAAAACTGAAACCAGCGCCAGCCCACA GGCAATACATTCTCAAAAACTAAAACCAGCGCCAGCCCACA < 41bp 0.41843883706718 0.833564790180334 0.16939485 0.22542846 prediction 0.667129580360668 Functional Gain - HCK ENSG00000101336 CDS Human protein_coding chr20:30659522 chr20:30659523 nonsynonymous SNV 0.097 0 22 hPsi_associated_SNPs_25915 0 0 0 0 2 Nucleus 0.438718593012029 0.438718698513672 0 0 hPsi_site_19639 iPseU_CNN:0;iRNA_PseU:0 19640 chr19 45448091 45448091 1 + G A CESC 45448090 + 45448070 45448110 41 GAGCCTGGTGAGGGGCAGGATGAAGGAGCTGCTGGAGACAG GAGCCTGGTGAGGGGCAGGATAAAGGAGCTGCTGGAGACAG < 41bp 0.431493209565813 0.833563463908683 0.26533473 0.42693126 prediction 0.667126927817365 Functional Gain - APOC4 ENSG00000224916;ENSG00000267467 CDS Human other chr19:45448090 chr19:45448091 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_25916 0 0 0 0 2 Endoplasmic reticulum 0.438616240270945 0.438718566830639 0 0 hPsi_site_19640 iPseU_CNN:0;iRNA_PseU:0 19641 chr4 107252955 107252955 1 + C A UCEC 107252954 + 107252934 107252974 41 GAAAACACCCTGATGCAGATTCTTTGTATGTGGAAGAAGTA GAAAACACCCTGATGCAGATTATTTGTATGTGGAAGAAGTA < 41bp 0.520151113758103 0.853714412035032 0.21574965 0.24119243 prediction 0.667126596553858 Functional Gain - AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107252954 chr4:107252955 nonsynonymous SNV 0.960 2 22 hPsi_associated_SNPs_25917 0 0 1 0 1 Ribosome 0.43871216303101 0.439128227233688 0 0 hPsi_site_19641 iPseU_CNN:0;iRNA_PseU:0 19642 chr11 101829037 101829037 1 + C A STAD 101829036 + 101829016 101829056 41 GGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAA GGCTACTAGCAAAAATGTGTTACAGCTTAAACTGGAGGAAA < 41bp 0.488277744006173 0.833562684550643 0.4683493 0.5777984 prediction 0.667125369101286 Functional Gain - CEP126 ENSG00000110318 CDS Human protein_coding chr11:101829036 chr11:101829037 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_25918 0 0 0 0 1 exosome 0.438718592994951 0.438718571974525 0.1555968 0 hPsi_site_19642 iPseU_CNN:0.1555968;iRNA_PseU:0 19643 chr1 109795605 109795605 1 + C A UCEC 109795604 + 109795584 109795624 41 GGAGGGCAACATCCCTGAGGTCTTTCAGCTGGACATCTTCT GGAGGGCAACATCCCTGAGGTATTTCAGCTGGACATCTTCT < 41bp 0.505461365989368 0.839020669972225 0.2780298 0.4017209 prediction 0.667118607965714 Functional Gain - CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109795604 chr1:109795605 synonymous SNV . 0 22 hPsi_associated_SNPs_25919 0 0 1 0 0 Endoplasmic reticulum 0.438715505592715 0.438719439841558 0 0 hPsi_site_19643 iPseU_CNN:0;iRNA_PseU:0 19644 chr1 43308795 43308795 1 + G A BLCA 43308794 + 43308774 43308814 41 TGGAGATGTGTCCCTCAAGGTGAACTCTTCTTTACTACCCC TGGAGATGTGTCCCTCAAGGTAAACTCTTCTTTACTACCCC < 41bp 0.554374070174756 0.887933185198481 0.7828193 0.88573843 prediction 0.667118230047449 Functional Gain - ERMAP ENSG00000164010 CDS Human protein_coding chr1:43308794 chr1:43308795 synonymous SNV . 0 22 hPsi_associated_SNPs_25920 0 0 1 0 0 chromatin 0.43874008189798 0.43871778241379 0.20583826 0 hPsi_site_19644 iPseU_CNN:0.20583826;iRNA_PseU:0 19645 chr15 95399675 95399675 1 + G A rs536203211 95399674 + 95399654 95399694 41 AGGCTGGGGATGCCGAGGTCTGTCCCACGCCCACCCGCCTG AGGCTGGGGATGCCGAGGTCTATCCCACGCCCACCCGCCTG < 41bp 0.486210160790616 0.833558142105189 0.30592215 0.39947957 prediction 0.667116284210378 Functional Gain - LOC440311 ENSG00000260521 ncRNA_exonic Human processed_pseudogene chr15:95399674 chr15:95399675 . . 0 22 hPsi_associated_SNPs_25921 0 0 1 0 0 unknown 0.438720138222301 0.438787407984856 0 0 hPsi_site_19645 iPseU_CNN:0;iRNA_PseU:0 19646 chr2 191523976 191523976 1 + C A COAD 191523975 + 191523955 191523995 41 TACAAAAAGCCAATCTACTTTCTTATTTTGATGCCTTTATC TACAAAAAGCCAATCTACTTTATTATTTTGATGCCTTTATC < 41bp 0.49182132337568 0.833556034805372 0.21155894 0.16626352 prediction 0.667112069610744 Functional Gain - NAB1 ENSG00000138386 CDS Human protein_coding chr2:191523975 chr2:191523976 nonsynonymous SNV 0.884 2 22 hPsi_associated_SNPs_25922 0 0 1 0 0 Cytosol 0.438892419579613 0.438710307334159 0 0 hPsi_site_19646 iPseU_CNN:0;iRNA_PseU:0 19647 chr16 89259923 89259923 1 + C A UCEC 89259922 + 89259902 89259942 41 GGGCGCGGTTCTGGAAGCAGTCTCGGGGCAAGGGGCTGCTG GGGCGCGGTTCTGGAAGCAGTATCGGGGCAAGGGGCTGCTG < 41bp 0.471416862029023 0.833549298084714 0.4839595 0.8582852 prediction 0.667098596169429 Functional Gain - CDH15 ENSG00000129910 CDS Human protein_coding chr16:89259922 chr16:89259923 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_25923 0 0 0 0 2 nucleus 0.438718592995102 0.438718592995098 0.7165704 0 hPsi_site_19647 iPseU_CNN:0.7165704;iRNA_PseU:0 19648 chr1 40431207 40431207 1 + C A UCEC 40431206 + 40431186 40431226 41 CCGAGCAGACTGAGCGGGATTCTGCCACCGCCTATCGTGAG CCGAGCAGACTGAGCGGGATTATGCCACCGCCTATCGTGAG < 41bp 0.533843090738917 0.867390418952885 0.39913973 0.5631583 prediction 0.667094656427935 Functional Gain - MFSD2A ENSG00000168389 CDS Human protein_coding chr1:40431206 chr1:40431207 nonsynonymous SNV 0.917 5 22 hPsi_associated_SNPs_25924 0 0 0 0 1 Ribosome 0.438718583743409 0.438715409157891 0.1263166 0 hPsi_site_19648 iPseU_CNN:0.1263166;iRNA_PseU:0 19649 chr11 20623037 20623037 1 + C A LUAD 20623036 + 20623016 20623056 41 CAACGCGCTGCACTGTAAGATCCCTTTTCTGCGAGGCCCGG CAACGCGCTGCACTGTAAGATACCTTTTCTGCGAGGCCCGG < 41bp 0.535177476702785 0.868724407798828 0.34797478 0.68342394 prediction 0.667093862192085 Functional Gain - SLC6A5 ENSG00000165970 CDS Human protein_coding chr11:20623036 chr11:20623037 synonymous SNV . 0 22 hPsi_associated_SNPs_25925 0 0 0 0 0 unknown 0.438718485066933 0.438653506611518 0.36684788 0 hPsi_site_19649 iPseU_CNN:0.36684788;iRNA_PseU:0 19650 chr6 132891927 132891927 1 + C A COAD 132891926 + 132891906 132891946 41 CAGGAATTTGCATCAGCGTGTCCTGGATCCTGCCCCTCATG CAGGAATTTGCATCAGCGTGTACTGGATCCTGCCCCTCATG < 41bp 0.512806349247658 0.846350917255368 0.2613045 0.8053337 prediction 0.667089136015421 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132891926 chr6:132891927 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_25926 0 0 0 0 0 unknown 0.438710496007536 0.438170137208683 0.6106674 0 hPsi_site_19650 iPseU_CNN:0.6106674;iRNA_PseU:0 19651 chr19 17999191 17999191 1 + C A UCEC 17999190 + 17999170 17999210 41 AGCTGACAGCTTCTATGCCATCTCCTATCTCTATTACGGTG AGCTGACAGCTTCTATGCCATATCCTATCTCTATTACGGTG < 41bp 0.467695100636628 0.833544364817525 0.6866808 0.8624605 prediction 0.667088729635051 Functional Gain - SLC5A5 ENSG00000105641 CDS Human protein_coding chr19:17999190 chr19:17999191 synonymous SNV . 0 22 hPsi_associated_SNPs_25927 0 0 0 0 2 Nucleus 0.438718070492984 0.442212543399097 0.3515594 0 hPsi_site_19651 iPseU_CNN:0.3515594;iRNA_PseU:0 19652 chr4 164271698 164271698 1 + G A rs201405862 164271697 + 164271677 164271717 41 CTTTTCTGATATCTTGGTTGTGCTGTTTTGCTCACCTTTCA CTTTTCTGATATCTTGGTTGTACTGTTTTGCTCACCTTTCA < 41bp 0.55583484747617 0.889374778770078 0.25823247 0.67358017 prediction 0.667079862587816 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164271697 chr4:164271698 synonymous SNV . 0 22 hPsi_associated_SNPs_25928 0 0 0 0 0 unknown 0.39312207885098 0.435657315270544 0.34716034 0 hPsi_site_19652 iPseU_CNN:0.34716034;iRNA_PseU:0 19653 chr19 56369305 56369305 1 + C A LUAD 56369304 + 56369284 56369324 41 CAAGATCTTTCGGGATAGGTTCCTGTACACGTTCTATTTCT CAAGATCTTTCGGGATAGGTTACTGTACACGTTCTATTTCT < 41bp 0.528381281851848 0.861917051569129 0.54844594 0.8151755 prediction 0.667071539434562 Functional Gain - NLRP4 ENSG00000160505 CDS Human protein_coding chr19:56369304 chr19:56369305 nonsynonymous SNV 0.002 4 22 hPsi_associated_SNPs_25929 0 0 0 0 0 exosome 0.438718593019157 0.438717909301112 0.53345912 0 hPsi_site_19653 iPseU_CNN:0.53345912;iRNA_PseU:0 19654 chr9 125552078 125552078 1 + C A LUSC 125552077 + 125552057 125552097 41 TACCCTGGTCATCCCGTCTCTCAACCCACTCATCTACAGCC TACCCTGGTCATCCCGTCTCTAAACCCACTCATCTACAGCC < 41bp 0.506874171377235 0.840394105518061 0.2774889 0.48300225 prediction 0.667039868281651 Functional Gain - OR5C1 ENSG00000148215 CDS Human protein_coding chr9:125552077 chr9:125552078 synonymous SNV . 0 22 hPsi_associated_SNPs_25930 0 0 0 0 0 unknown 0.438750493731611 0.43871856984292 0 0 hPsi_site_19654 iPseU_CNN:0;iRNA_PseU:0 19655 chr15 41001254 41001254 1 + G A UCEC 41001253 + 41001233 41001273 41 GACTGGATCTATCACAGAAATGTTTGGAGAATTCCGAACTG GACTGGATCTATCACAGAAATATTTGGAGAATTCCGAACTG < 41bp 0.426777261598784 0.833519702223097 0.5083303 0.5105586 prediction 0.667039404446195 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41001253 chr15:41001254 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25931 0 0 1 0 1 Cytosol 0.438719254261526 0.43872982353333 0.00445659999999992 0 hPsi_site_19655 iPseU_CNN:0.00445659999999992;iRNA_PseU:0 19656 chr15 78777186 78777186 1 + G A rs139610892 78777185 + 78777165 78777205 41 TGAAGGAAGTGAATATAAGCTGTCTCATGGATCAGTGGTCA TGAAGGAAGTGAATATAAGCTATCTCATGGATCAGTGGTCA < 41bp 0.440509112567854 0.833519174103982 0.24509516 0.24643123 prediction 0.667038348207964 Functional Gain - IREB2 ENSG00000136381 CDS Human protein_coding chr15:78777185 chr15:78777186 synonymous SNV . 0 22 hPsi_associated_SNPs_25932 0 0 1 0 2 Cytosol 0.440329146075333 0.438798620506699 0 0 hPsi_site_19656 iPseU_CNN:0;iRNA_PseU:0 19657 chr12 58015494 58015494 1 + G A rs923828 58015493 + 58015473 58015513 41 ACGCTGGCCTCCTTGCTGACTGCGCTGCCTCGGAGCAGTCC ACGCTGGCCTCCTTGCTGACTACGCTGCCTCGGAGCAGTCC < 41bp 0.4166767848314 0.833515299837795 0.3315403 0.6890557 prediction 0.667030599675591 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58015493 chr12:58015494 nonsynonymous SNV 0.332 1 22 hPsi_associated_SNPs_25933 0 0 0 0 1 chromatin 0.438713658946809 0.438713987655507 0.3781114 0 hPsi_site_19657 iPseU_CNN:0.3781114;iRNA_PseU:0 19658 chr10 21959473 21959473 1 + C A COAD 21959472 + 21959452 21959492 41 AAATGCAAATTTCCAGGAAGTCTCTGCACACACCTCTAGTG AAATGCAAATTTCCAGGAAGTATCTGCACACACCTCTAGTG < 41bp 0.494502365715956 0.833514211380387 0.23867047 0.5752106 prediction 0.667028422760773 Functional Gain - MLLT10 ENSG00000078403 CDS Human protein_coding chr10:21959472 chr10:21959473 synonymous SNV . 0 22 hPsi_associated_SNPs_25934 0 0 1 0 1 Ribosome 0.438758942808734 0.438878715068151 0.1504212 0 hPsi_site_19658 iPseU_CNN:0.1504212;iRNA_PseU:0 19659 chr12 29617573 29617573 1 + G A LUSC 29617572 + 29617552 29617592 41 GCTTAGTTGTATTAGGGCAATGTCAGAGTCATAACTTAGTG GCTTAGTTGTATTAGGGCAATATCAGAGTCATAACTTAGTG < 41bp 0.456466376842952 0.83351150521121 0.31216353 0.37242413 prediction 0.667023010422421 Functional Gain - OVCH1 ENSG00000187950 CDS Human protein_coding chr12:29617572 chr12:29617573 synonymous SNV . 0 22 hPsi_associated_SNPs_25935 0 0 0 0 0 exosome 0.438647969129253 0.438149284017756 0 0 hPsi_site_19659 iPseU_CNN:0;iRNA_PseU:0 19660 chr19 41798347 41798347 1 + C A UCEC 41798346 + 41798326 41798366 41 TGTCCTCCCGGGGTTTACCTTCATCCAGCACCTTCCCCTTA TGTCCTCCCGGGGTTTACCTTAATCCAGCACCTTCCCCTTA < 41bp 0.474967795349895 0.833509870264724 0.27115276 0.33380514 prediction 0.667019740529447 Functional Gain - HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41798346 chr19:41798347 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_25936 0 0 1 0 1 Cytosol 0.438491801821554 0.438709728457988 0 0 hPsi_site_19660 iPseU_CNN:0;iRNA_PseU:0 19661 chr22 44319842 44319842 1 + C A BLCA 44319841 + 44319821 44319861 41 GTCCTTCGCGGGCTGCGGCTTCCTGGGCTTCTACCACGTCG GTCCTTCGCGGGCTGCGGCTTACTGGGCTTCTACCACGTCG < 41bp 0.512610708020488 0.846108468736192 0.22964025 0.6523102 prediction 0.666995521431409 Functional Gain - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44319841 chr22:44319842 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25937 0 0 1 0 0 cytosol 0.438718592995102 0.438718592995102 0.3046204 0 hPsi_site_19661 iPseU_CNN:0.3046204;iRNA_PseU:0 19662 chr4 110765497 110765497 1 + G A rs141905664 110765496 + 110765476 110765516 41 TCAAGCACAGCTCGTGCTTCTGTTTGTGCACTCTGGCTGCT TCAAGCACAGCTCGTGCTTCTATTTGTGCACTCTGGCTGCT < 41bp 0.51147657548729 0.844973439259986 0.4691209 0.56681234 prediction 0.666993727545392 Functional Gain - RRH ENSG00000180245 UTR3 Human protein_coding chr4:110765496 chr4:110765497 . . 0 22 hPsi_associated_SNPs_25938 0 0 1 0 0 nucleoplasm 0.435660486206819 0.433673030150186 0.13362468 0 hPsi_site_19662 iPseU_CNN:0.13362468;iRNA_PseU:0 19663 chr1 231401139 231401139 1 + C A UCEC 231401138 + 231401118 231401158 41 TAAACTCTACTGGGCTGTATTCTCTGAATATGTAAAAACTA TAAACTCTACTGGGCTGTATTATCTGAATATGTAAAAACTA < 41bp 0.519808457656251 0.85330253281322 0.401065 0.6257984 prediction 0.666988150313937 Functional Gain - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401138 chr1:231401139 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_25939 0 0 1 0 1 Cytosol 0.438716920676752 0.438721097111338 0.2515968 0 hPsi_site_19663 iPseU_CNN:0.2515968;iRNA_PseU:0 19664 chr9 79118038 79118038 1 + G A READ 79118037 + 79118017 79118057 41 CAACCTGGAAACGGAGAGGATGCCATCCCATAAAGAAGAAA CAACCTGGAAACGGAGAGGATACCATCCCATAAAGAAGAAA < 41bp 0.434954996742113 0.833494029853184 0.25961554 0.6611415 prediction 0.666988059706369 Functional Gain - GCNT1 ENSG00000187210 CDS Human protein_coding chr9:79118037 chr9:79118038 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_25940 0 0 0 0 0 exosome 0.438382932804604 0.438347811116826 0.322283 0 hPsi_site_19664 iPseU_CNN:0.322283;iRNA_PseU:0 19665 chr19 8531138 8531138 1 + G A HNSC 8531137 + 8531117 8531157 41 AGCTGGATTATAAAGTTGGCTGGAAGAAACTGAAGGAAGTA AGCTGGATTATAAAGTTGGCTAGAAGAAACTGAAGGAAGTA < 41bp 0.429987290833145 0.833487639720347 0.18838164 0.22867876 prediction 0.666975279440693 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8531137 chr19:8531138 stopgain 1.000 1 22 hPsi_associated_SNPs_25941 0 0 1 0 1 Nucleus 0.438718592994955 0.438718584190951 0 0 hPsi_site_19665 iPseU_CNN:0;iRNA_PseU:0 19666 chr11 55135894 55135894 1 + G A SKCM 55135893 + 55135873 55135913 41 ATGCTGTTGGCGGCCTGGATTGGAGGCTTTCTTCACTCATT ATGCTGTTGGCGGCCTGGATTAGAGGCTTTCTTCACTCATT < 41bp 0.45492266607352 0.833477167825171 0.33728597 0.6701164 prediction 0.666954335650342 Functional Gain - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55135893 chr11:55135894 nonsynonymous SNV 0.158 3 22 hPsi_associated_SNPs_25942 0 0 0 0 0 unknown 0.43871859307525 0.43879113468966 0.3402328 0 hPsi_site_19666 iPseU_CNN:0.3402328;iRNA_PseU:0 19667 chr19 3527044 3527044 1 + C A BLCA 3527043 + 3527023 3527063 41 GTGTCTCCCTACTCCCTGTCTCCCGTCAGCAACAAGAGGTG GTGTCTCCCTACTCCCTGTCTACCGTCAGCAACAAGAGGTG < 41bp 0.486622302756964 0.83347220086227 0.21399713 0.3057227 prediction 0.666944401724539 Functional Gain - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3527043 chr19:3527044 nonsynonymous SNV 0.747 4 22 hPsi_associated_SNPs_25943 0 0 0 0 2 Ribosome 0.438708967483019 0.439225628651214 0 0 hPsi_site_19667 iPseU_CNN:0;iRNA_PseU:0 19668 chr1 197889148 197889148 1 + G A UCEC 197889147 + 197889127 197889167 41 AGCCCGCCCTGTGCGCCGGCTGCGGGGGCAAGATCTCGGAC AGCCCGCCCTGTGCGCCGGCTACGGGGGCAAGATCTCGGAC < 41bp 0.421601178513526 0.833470057711208 0.30612797 0.9066547 prediction 0.666940115422416 Functional Gain - LHX9 ENSG00000143355 CDS Human protein_coding chr1:197889147 chr1:197889148 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_25944 0 0 0 0 1 exosome 0.438735914243632 0.438722072372054 0.8133094 0 hPsi_site_19668 iPseU_CNN:0.8133094;iRNA_PseU:0 19669 chr1 155148551 155148551 1 + G A UCEC 155148550 + 155148530 155148570 41 GAGTGTGGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCC GAGTGTGGGAGGTGCCATCCTATGCCAGTTGTGCAAGCCCC < 41bp 0.555063540897133 0.888532330267364 0.303253 0.37738487 prediction 0.666937578740462 Functional Gain - TRIM46 ENSG00000163462 CDS Human protein_coding chr1:155148550 chr1:155148551 synonymous SNV . 0 22 hPsi_associated_SNPs_25945 0 0 0 0 0 nucleolus 0.4386933353227 0.438648442632099 0 0 hPsi_site_19669 iPseU_CNN:0;iRNA_PseU:0 19670 chr13 49030396 49030396 1 + C A UCEC 49030395 + 49030375 49030415 41 GTTCAACTACGCGTGTAAATTCTACTGCAAATGCAGAGACA GTTCAACTACGCGTGTAAATTATACTGCAAATGCAGAGACA < 41bp 0.507899909613253 0.841363862432474 0.4359846 0.6186142 prediction 0.666927905638441 Functional Gain - RB1 ENSG00000139687 CDS Human protein_coding chr13:49030395 chr13:49030396 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25946 0 0 1 0 2 Nucleus 0.431848608253553 0.436731566715743 0.2372284 0 hPsi_site_19670 iPseU_CNN:0.2372284;iRNA_PseU:0 19671 chr10 64565434 64565434 1 + G A rs35803962 64565433 + 64565413 64565453 41 GGAAGGGCCTGCCGCCTTCCTGGACATCCTGGCCCCGCCCT GGAAGGGCCTGCCGCCTTCCTAGACATCCTGGCCCCGCCCT < 41bp 0.55137046059863 0.88483367010701 0.2954306 0.65259194 prediction 0.666926419016761 Functional Gain - ADO ENSG00000181915 CDS Human protein_coding chr10:64565433 chr10:64565434 synonymous SNV . 0 22 hPsi_associated_SNPs_25947 0 0 1 0 0 exosome 0.438718601814406 0.438718592977931 0.30518388 0 hPsi_site_19671 iPseU_CNN:0.30518388;iRNA_PseU:0 19672 chr2 25044408 25044408 1 + G T DLBC 25044409 - 25044389 25044429 41 CAACATCAACAACCAGTCCTTCAATAACTTCATGCTGCGCA CAACATCAACAACCAGTCCTTAAATAACTTCATGCTGCGCA < 41bp 0.480358259063637 0.833462893579967 0.4745285 0.6375597 prediction 0.666925787159934 Functional Gain - ADCY3 ENSG00000138031 CDS Human protein_coding chr2:25044409 chr2:25044408 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25948 0 0 1 0 1 Ribosome 0.44119267116378 0.437695718192006 0.2751194 0 hPsi_site_19672 iPseU_CNN:0.2751194;iRNA_PseU:0 19673 chr7 143657094 143657094 1 + G A LUSC 143657093 + 143657073 143657113 41 GATAACCAGACTTGGGTGAGTGAATTTATTCTCCTCGGCCT GATAACCAGACTTGGGTGAGTAAATTTATTCTCCTCGGCCT < 41bp 0.528783902307637 0.86224672354293 0.2590469 0.31574863 prediction 0.666925642470586 Functional Gain - OR2F1 ENSG00000213215 CDS Human polymorphic_pseudogene chr7:143657093 chr7:143657094 nonsynonymous SNV 0.447 1 22 hPsi_associated_SNPs_25949 0 0 0 0 1 unknown 0.438090490539326 0.43871856719842 0 0 hPsi_site_19673 iPseU_CNN:0;iRNA_PseU:0 19674 chr1 1266738 1266738 1 + G A rs76755863 1266737 + 1266717 1266757 41 GCCTCTGCCATGCTGGGCCCTGCTGTCCTGGGCCTCAGCCT GCCTCTGCCATGCTGGGCCCTACTGTCCTGGGCCTCAGCCT < 41bp 0.473698135371637 0.833461222006305 0.23674408 0.38352472 prediction 0.66692244401261 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1266737 chr1:1266738 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_25950 0 0 0 0 0 chromatin 0.438713051607139 0.438732447572604 0 0 hPsi_site_19674 iPseU_CNN:0;iRNA_PseU:0 19675 chr3 126451940 126451940 1 + G A SKCM 126451939 + 126451919 126451959 41 AGGTATGAACAGGAGCATGCTGCTATCCAGGATAAGCTCTT AGGTATGAACAGGAGCATGCTACTATCCAGGATAAGCTCTT < 41bp 0.433089056921223 0.833460638663896 0.30003935 0.61816376 prediction 0.666921277327793 Functional Gain - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126451939 chr3:126451940 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_25951 0 0 0 0 1 Ribosome 0.43978896884269 0.438881478331514 0.23632752 0 hPsi_site_19675 iPseU_CNN:0.23632752;iRNA_PseU:0 19676 chr9 131039012 131039012 1 + G A rs200738646 131039011 + 131038991 131039031 41 AACCAAGACTTACCCGAAGTTGCCGCGGGGCCTTCCGATCC AACCAAGACTTACCCGAAGTTACCGCGGGGCCTTCCGATCC < 41bp 0.424542248704214 0.833457120873424 0.19610143 0.4003145 prediction 0.666914241746848 Functional Gain - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131039011 chr9:131039012 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_25952 0 0 1 0 1 Ribosome 0.438718592860697 0.438718556707092 0 0 hPsi_site_19676 iPseU_CNN:0;iRNA_PseU:0 19677 chr3 120315283 120315283 1 + C A UCEC 120315282 + 120315262 120315302 41 ACCCAGCCGAATACAACATATCTCCGGAAACCCGGCGGGCG ACCCAGCCGAATACAACATATATCCGGAAACCCGGCGGGCG < 41bp 0.518125200871865 0.851578256290248 0.3197805 0.50779253 prediction 0.666906110836766 Functional Gain - NDUFB4 ENSG00000065518 CDS Human protein_coding chr3:120315282 chr3:120315283 nonsynonymous SNV 0.269 4 22 hPsi_associated_SNPs_25953 0 0 1 0 0 Ribosome 0.438694185525435 0.438715202194832 0.01558506 0 hPsi_site_19677 iPseU_CNN:0.01558506;iRNA_PseU:0 19678 chr3 140675471 140675471 1 + G A BLCA 140675470 + 140675450 140675490 41 TTATATTTCTGAAGTTCAGCTGAACACCATGGCTGGAGCCA TTATATTTCTGAAGTTCAGCTAAACACCATGGCTGGAGCCA < 41bp 0.484707889379265 0.833450711829918 0.24816936 0.39008313 prediction 0.666901423659835 Functional Gain - SLC25A36 ENSG00000114120 CDS Human protein_coding chr3:140675470 chr3:140675471 synonymous SNV . 0 22 hPsi_associated_SNPs_25954 0 0 1 0 1 Nucleus 0.436125960335414 0.442276596708531 0 0 hPsi_site_19678 iPseU_CNN:0;iRNA_PseU:0 19679 chr9 117400939 117400939 1 + C A UCEC 117400938 + 117400918 117400958 41 CTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCA CTCCTCTCCTGCCCGGCAATTATTGTCCTAACGAGAGGCCA < 41bp 0.53257712984591 0.866025242638561 0.40841076 0.6224556 prediction 0.666896225585301 Functional Gain - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117400938 chr9:117400939 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_25955 0 0 1 0 1 unknown 0.438718619726509 0.438718553075223 0.2449112 0 hPsi_site_19679 iPseU_CNN:0.2449112;iRNA_PseU:0 19680 chr8 30891158 30891158 1 + C T rs11574156 30891159 - 30891139 30891179 41 CGCGCCGCGGTGCGCATGCGTGGAGGCCCTCGCTGCCGCTG CGCGCCGCGGTGCGCATGCGTAGAGGCCCTCGCTGCCGCTG < 41bp 0.509928640470564 0.843375871424871 0.5069988 0.49908397 prediction 0.666894461908613 Functional Gain - PURG;WRN ENSG00000172733 UTR5 Human protein_coding chr8:30891159 chr8:30891158 . . 0 22 hPsi_associated_SNPs_25956 1 0 0 0 0 unknown 0.438719611438536 0.438709078010215 0 0 hPsi_site_19680 iPseU_CNN:0;iRNA_PseU:0 19681 chr19 1364566 1364566 1 + C A CESC 1364565 + 1364545 1364585 41 TAAACATAAAAAATACCCCTTCTGGCCAGCAGTGGTAAGAA TAAACATAAAAAATACCCCTTATGGCCAGCAGTGGTAAGAA < 41bp 0.474060451065682 0.833444933999388 0.35174417 0.32928625 prediction 0.666889867998776 Functional Gain - MUM1 ENSG00000160953 CDS Human protein_coding chr19:1364565 chr19:1364566 nonsynonymous SNV 0.953 3 22 hPsi_associated_SNPs_25957 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0 0 hPsi_site_19681 iPseU_CNN:0;iRNA_PseU:0 19682 chr19 44611204 44611204 1 + C A UCEC 44611203 + 44611183 44611223 41 TGATATATGTGGTAAGAGCTTCTGTGGTAGATCAAGACTTA TGATATATGTGGTAAGAGCTTATGTGGTAGATCAAGACTTA < 41bp 0.517427954187345 0.850869556653904 0.27844262 0.30566952 prediction 0.666883204933118 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611203 chr19:44611204 nonsynonymous SNV 0.073 3 22 hPsi_associated_SNPs_25958 0 0 1 0 0 nucleus 0.438719040215841 0.438729669650025 0 0 hPsi_site_19682 iPseU_CNN:0;iRNA_PseU:0 19683 chr11 55606641 55606641 1 + C A COAD 55606640 + 55606620 55606660 41 TCTGCTCTACACAGTTGCCATCTCCCAGAAACTCTGTGCCA TCTGCTCTACACAGTTGCCATATCCCAGAAACTCTGTGCCA < 41bp 0.509520598165476 0.842961731053797 0.31773308 0.47310913 prediction 0.666882265776642 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606640 chr11:55606641 synonymous SNV . 0 22 hPsi_associated_SNPs_25959 0 0 0 0 0 unknown 0.438544088056428 0.438454468918225 0 0 hPsi_site_19683 iPseU_CNN:0;iRNA_PseU:0 19684 chr7 99661659 99661659 1 + G A UCS 99661658 + 99661638 99661678 41 GAGAGACGTTATATATGTGCTGAATGTGGCAAAGCCTTTAG GAGAGACGTTATATATGTGCTAAATGTGGCAAAGCCTTTAG < 41bp 0.439577594454819 0.833434318490022 0.13705081 0.21003908 prediction 0.666868636980044 Functional Gain - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99661658 chr7:99661659 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_25960 0 0 1 0 0 chromatin 0.438708232792304 0.438763606101508 0 0 hPsi_site_19684 iPseU_CNN:0;iRNA_PseU:0 19685 chr5 180374609 180374609 1 + C A UCEC 180374608 + 180374588 180374628 41 CATTGTTGGACTGAAGATTTTCTTCTCCAAATTCCAGTGTA CATTGTTGGACTGAAGATTTTATTCTCCAAATTCCAGTGTA < 41bp 0.481967583537853 0.83343015789167 0.28177488 0.44208255 prediction 0.666860315783341 Functional Gain - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180374608 chr5:180374609 nonsynonymous SNV 0.060 0 22 hPsi_associated_SNPs_25961 0 0 0 0 1 chromatin 0.438715056846166 0.43870940347498 0 0 hPsi_site_19685 iPseU_CNN:0;iRNA_PseU:0 19686 chr20 29623224 29623224 1 + C A BRCA 29623223 + 29623203 29623243 41 ATACATGCACTCGACAATGGTCTTTTTACCCTGGGAGCTCC ATACATGCACTCGACAATGGTATTTTTACCCTGGGAGCTCC < 41bp 0.48372240205932 0.833425010177853 0.28963375 0.6534239 prediction 0.666850020355706 Functional Gain - FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29623223 chr20:29623224 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25962 0 0 0 0 2 unknown 0.438687316587768 0.438308816220359 0.3068478 0 hPsi_site_19686 iPseU_CNN:0.3068478;iRNA_PseU:0 19687 chr11 69063404 69063404 1 + G A COAD 69063403 + 69063383 69063423 41 TCTGCAAGGGTGGTGGGCGTTGCTCACCTGGGAGAAGCCTT TCTGCAAGGGTGGTGGGCGTTACTCACCTGGGAGAAGCCTT < 41bp 0.439104180894602 0.833415060497184 0.39508563 0.92432535 prediction 0.666830120994368 Functional Gain - MYEOV ENSG00000172927 CDS Human protein_coding chr11:69063403 chr11:69063404 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_25963 0 0 1 0 0 Ribosome 0.438717690880839 0.43871177594838 0.8486507 0 hPsi_site_19687 iPseU_CNN:0.8486507;iRNA_PseU:0 19688 chr4 39278698 39278698 1 + C A GBM 39278697 + 39278677 39278717 41 CCATGTCCATTCTGCAAATTTCTTCTCCCAGAGTGTGAACT CCATGTCCATTCTGCAAATTTATTCTCCCAGAGTGTGAACT < 41bp 0.515321235042424 0.848734260433566 0.32886755 0.3624677 prediction 0.666826050782284 Functional Gain - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39278697 chr4:39278698 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_25964 2 0 1 0 2 Cytosol 0.438939252966561 0.438718648901313 0 0 hPsi_site_19688 iPseU_CNN:0;iRNA_PseU:0 19689 chrX 153171576 153171576 1 + G A UCEC 153171575 + 153171555 153171595 41 CCCTGGGGCCGTCGCACCTATGTCACCTGGATTGCCCTGAT CCCTGGGGCCGTCGCACCTATATCACCTGGATTGCCCTGAT < 41bp 0.563255969497614 0.896668669727165 0.32623035 0.40326208 prediction 0.666825400459103 Functional Gain - AVPR2 ENSG00000126895 CDS Human protein_coding chrX:153171575 chrX:153171576 nonsynonymous SNV 0.953 1 22 hPsi_associated_SNPs_25965 0 0 0 0 0 exosome 0.438719433357062 0.438720884534124 0 0 hPsi_site_19689 iPseU_CNN:0;iRNA_PseU:0 19690 chr16 3406129 3406129 1 + C A LUSC 3406128 + 3406108 3406148 41 TACACCCATGTACTTCTTCCTCAGCAACCTCTCCTCCTTGG TACACCCATGTACTTCTTCCTAAGCAACCTCTCCTCCTTGG < 41bp 0.519154716329525 0.852560176829748 0.31976986 0.45501223 prediction 0.666810921000447 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406128 chr16:3406129 synonymous SNV . 0 22 hPsi_associated_SNPs_25966 0 0 0 0 0 unknown 0.438718592995103 0.438718592995102 0 0 hPsi_site_19690 iPseU_CNN:0;iRNA_PseU:0 19691 chr19 37967278 37967278 1 + G A LIHC 37967277 + 37967257 37967297 41 ACCAAGTGTGATATTATTGTTGGAACAAGGAAAAGCACCCT ACCAAGTGTGATATTATTGTTAGAACAAGGAAAAGCACCCT < 41bp 0.429319346898992 0.833401473447448 0.21234196 0.2868979 prediction 0.666802946894897 Functional Gain - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37967277 chr19:37967278 synonymous SNV . 0 22 hPsi_associated_SNPs_25967 0 0 1 0 2 exosome 0.438439639566673 0.43893580072145 0 0 hPsi_site_19691 iPseU_CNN:0;iRNA_PseU:0 19692 chr14 55819028 55819028 1 + G A COAD 55819027 + 55819007 55819047 41 ACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGT ACAGTGCAAGAAAAAGTATGTAAAAGGGGATGTGTCCCTGT < 41bp 0.442763571085459 0.833401436906013 0.37135935 0.65364486 prediction 0.666802873812026 Functional Gain - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55819027 chr14:55819028 synonymous SNV . 0 22 hPsi_associated_SNPs_25968 0 0 1 0 0 Nucleus 0.438650248539808 0.438718558892818 0.30728972 0 hPsi_site_19692 iPseU_CNN:0.30728972;iRNA_PseU:0 19693 chr11 75851833 75851833 1 + C A UCEC 75851832 + 75851812 75851852 41 TGGGGGTGCAGATGTAGGCTTCTCTGGGGGGATCCCTTCAC TGGGGGTGCAGATGTAGGCTTATCTGGGGGGATCCCTTCAC < 41bp 0.486946635505947 0.833396123119622 0.3978112 0.6594095 prediction 0.666792246239243 Functional Gain - UVRAG ENSG00000198382 CDS Human protein_coding chr11:75851832 chr11:75851833 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_25969 0 0 0 0 1 Ribosome 0.438718582077754 0.438718513614495 0.318819 0 hPsi_site_19693 iPseU_CNN:0.318819;iRNA_PseU:0 19694 chr17 70119808 70119808 1 + C A COAD 70119807 + 70119787 70119827 41 CAGACAGCCCCCTATCGACTTCCGCGACGTGGACATCGGCG CAGACAGCCCCCTATCGACTTACGCGACGTGGACATCGGCG < 41bp 0.528570202958722 0.861963560859446 0.2715355 0.87585187 prediction 0.666786715801448 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119807 chr17:70119808 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_25970 0 0 1 0 0 Cytosol 0.438613929614589 0.438749702323037 0.75170374 0 hPsi_site_19694 iPseU_CNN:0.75170374;iRNA_PseU:0 19695 chr3 152553841 152553841 1 + G A UCEC 152553840 + 152553820 152553860 41 GAGCGGCATCTCCGTGTACATGTTCAATTTGGCTCTGGCCG GAGCGGCATCTCCGTGTACATATTCAATTTGGCTCTGGCCG < 41bp 0.558232989905129 0.891626043234789 0.63421375 0.7050603 prediction 0.666786106659321 Functional Gain - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553840 chr3:152553841 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25971 0 0 1 0 0 Endoplasmic reticulum 0.438879091136015 0.438601508550898 0.1416931 0 hPsi_site_19695 iPseU_CNN:0.1416931;iRNA_PseU:0 19696 chr5 74646693 74646693 1 + C A LIHC 74646692 + 74646672 74646712 41 AAAACAGTACAGCAGATACTTCTAAGGTTTCATTAGGACTG AAAACAGTACAGCAGATACTTATAAGGTTTCATTAGGACTG < 41bp 0.517373373333125 0.85076489169771 0.23733604 0.2311177 prediction 0.666783036729169 Functional Gain - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74646692 chr5:74646693 nonsynonymous SNV 0.405 0 22 hPsi_associated_SNPs_25972 0 0 1 0 1 Nucleus 0.438703912366817 0.438721370708346 0 0 hPsi_site_19696 iPseU_CNN:0;iRNA_PseU:0 19697 chr17 21319000 21319000 1 + G A BLCA 21318999 + 21318979 21319019 41 CACGGTGACCTGGAGCCGGCTGAGGGCCGGGGCCGCACACC CACGGTGACCTGGAGCCGGCTAAGGGCCGGGGCCGCACACC < 41bp 0.563897284909827 0.897286813762502 0.19623113 0.38774037 prediction 0.666779057705349 Functional Gain - KCNJ12;KCNJ18 ENSG00000184185 CDS Human protein_coding chr17:21318999 chr17:21319000 nonsynonymous SNV 0.592 1 22 hPsi_associated_SNPs_25973 0 0 0 0 0 unknown 0.438913603453511 0.438717228867378 0 0 hPsi_site_19697 iPseU_CNN:0;iRNA_PseU:0 19698 chr1 173454617 173454617 1 + G A BLCA 173454616 + 173454596 173454636 41 CTGGATCCAGCAGAGAAGGATGAAAAGGGCATGCCTGTGAC CTGGATCCAGCAGAGAAGGATAAAAAGGGCATGCCTGTGAC < 41bp 0.559086713013139 0.892468402720589 0.20454195 0.39329523 prediction 0.666763379414901 Functional Gain - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454616 chr1:173454617 nonsynonymous SNV 0.948 1 22 hPsi_associated_SNPs_25974 0 0 1 0 1 Ribosome 0.438718081614488 0.438721170832395 0 0 hPsi_site_19698 iPseU_CNN:0;iRNA_PseU:0 19699 chr9 117071728 117071728 1 + C A COAD 117071727 + 117071707 117071747 41 TTTTGAAGCTGGGGGTCAGTTCCGGCCCGAGGTGTCCATGG TTTTGAAGCTGGGGGTCAGTTACGGCCCGAGGTGTCCATGG < 41bp 0.508710883088376 0.842091349874514 0.63303554 0.84387654 prediction 0.666760933572276 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117071727 chr9:117071728 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_25975 0 0 1 0 1 Nucleus 0.438700081136689 0.43871858084818 0.421682 0 hPsi_site_19699 iPseU_CNN:0.421682;iRNA_PseU:0 19700 chr11 36596315 36596315 1 + G A LUAD 36596314 + 36596294 36596334 41 CTGCAGTCAGTACCACAAGATGTACAGGACTGTGAAAGCCA CTGCAGTCAGTACCACAAGATATACAGGACTGTGAAAGCCA < 41bp 0.431261268222832 0.833378703483364 0.25954723 0.39996034 prediction 0.666757406966728 Functional Gain - RAG1 ENSG00000166349 CDS Human protein_coding chr11:36596314 chr11:36596315 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_25976 0 0 0 5 0 exosome 0.438718743797383 0.438718411025426 0 0 hPsi_site_19700 iPseU_CNN:0;iRNA_PseU:0 19701 chr19 37854607 37854607 1 + G A UCEC 37854606 + 37854586 37854626 41 CAGGAGAGAAGCCTTATATTTGCAGAAAGTGTGGACGGGGC CAGGAGAGAAGCCTTATATTTACAGAAAGTGTGGACGGGGC < 41bp 0.554198179384552 0.887575208891594 0.29753518 0.4821606 prediction 0.666754059014084 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854606 chr19:37854607 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_25977 0 0 1 0 0 exosome 0.438703752781258 0.438716608982349 0 0 hPsi_site_19701 iPseU_CNN:0;iRNA_PseU:0 19702 chr4 187192915 187192915 1 + C A LUSC 187192914 + 187192894 187192934 41 GCGGAATCACCATCTGAGGATCCCACCCGATGGTAAATGCT GCGGAATCACCATCTGAGGATACCACCCGATGGTAAATGCT < 41bp 0.487954956247169 0.833370025887139 0.2384153 0.48477095 prediction 0.666740051774278 Functional Gain - F11 ENSG00000088926 CDS Human protein_coding chr4:187192914 chr4:187192915 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_25978 0 0 1 0 1 cytosol 0.43871859312603 0.438718555028329 0 0 hPsi_site_19702 iPseU_CNN:0;iRNA_PseU:0 19703 chr12 121131925 121131925 1 + G A LUAD 121131924 + 121131904 121131944 41 TGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACC TGGCATGAAACTGCCAATCCTACGTTCCAACCCTGAGGACC < 41bp 0.422167495768724 0.833368503265552 0.16927719 0.5335924 prediction 0.666737006531104 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121131924 chr12:121131925 synonymous SNV . 0 22 hPsi_associated_SNPs_25979 0 0 1 0 1 Ribosome 0.438727313796335 0.438721043724889 0.0671847999999999 0 hPsi_site_19703 iPseU_CNN:0.0671847999999999;iRNA_PseU:0 19704 chr20 44505507 44505507 1 + G A BLCA 44505506 + 44505486 44505526 41 AACACACAGCACATACATGGTGACTCTAAAGTGGCTAGTCC AACACACAGCACATACATGGTAACTCTAAAGTGGCTAGTCC < 41bp 0.45916516344273 0.833367877551994 0.24182323 0.36265242 prediction 0.666735755103989 Functional Gain - ZSWIM3 ENSG00000132801 CDS Human protein_coding chr20:44505506 chr20:44505507 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_25980 0 0 0 0 0 Cytosol 0.438433655021981 0.4387185918486 0 0 hPsi_site_19704 iPseU_CNN:0;iRNA_PseU:0 19705 chr16 29848215 29848215 1 + G T LUSC 29848214 + 29848194 29848234 41 CCCTGGGCCCCCACAACTACTGCGTGATTCTCGACCCTGTC CCCTGGGCCCCCACAACTACTTCGTGATTCTCGACCCTGTC < 41bp 0.505042352147569 0.838410001669616 0.18183827 0.3616997 prediction 0.666735299044093 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29848214 chr16:29848215 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_25981 0 0 0 0 0 Nucleus 0.438718438899504 0.438718560790437 0 0 hPsi_site_19705 iPseU_CNN:0;iRNA_PseU:0 19706 chr9 35675829 35675829 1 + C T SKCM 35675830 - 35675810 35675850 41 CCGGGCAGAAGGCGGCGAGCTGGGGGCGGATATCCACCGGG CCGGGCAGAAGGCGGCGAGCTAGGGGCGGATATCCACCGGG < 41bp 0.545887108844329 0.879251732297353 0.21901384 0.6803868 prediction 0.666729246906048 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35675830 chr9:35675829 stopgain 0.092 0 22 hPsi_associated_SNPs_25982 0 0 0 0 0 Endoplasmic reticulum 0.438718473666038 0.438716975117059 0.3607736 0 hPsi_site_19706 iPseU_CNN:0.3607736;iRNA_PseU:0 19707 chr19 57910942 57910942 1 + C A GBM 57910941 + 57910921 57910961 41 GTGCAGCGAATGCGGGAAATTCTTTCGTTACAACTCCAACC GTGCAGCGAATGCGGGAAATTATTTCGTTACAACTCCAACC < 41bp 0.504605764651453 0.837967851236413 0.86399114 0.80303085 prediction 0.66672417316992 Functional Gain - ZNF548 ENSG00000188785 CDS Human protein_coding chr19:57910941 chr19:57910942 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_25983 0 0 1 0 0 Nucleus 0.438718580095825 0.438718592984185 0 0 hPsi_site_19707 iPseU_CNN:0;iRNA_PseU:0 19708 chr10 103988622 103988622 1 + C A SKCM 103988621 + 103988601 103988641 41 CCTGCGTAAGCGGCCACTCATCTTTATTCACTGGTACCACC CCTGCGTAAGCGGCCACTCATATTTATTCACTGGTACCACC < 41bp 0.523098028514395 0.856456390326587 0.23436931 0.315952 prediction 0.666716723624383 Functional Gain - ELOVL3 ENSG00000119915 CDS Human protein_coding chr10:103988621 chr10:103988622 synonymous SNV . 0 22 hPsi_associated_SNPs_25984 0 0 0 0 1 exosome 0.438243599502009 0.445268532973473 0 0 hPsi_site_19708 iPseU_CNN:0;iRNA_PseU:0 19709 chrX 122551460 122551460 1 + C A UCEC 122551459 + 122551439 122551479 41 TACATTGGAGTCAGCGTAGTTCTTTTCCTAGTCAGCAGGTT TACATTGGAGTCAGCGTAGTTATTTTCCTAGTCAGCAGGTT < 41bp 0.507138974515588 0.840490544830557 0.584787 0.59261566 prediction 0.666703140629938 Functional Gain - GRIA3 ENSG00000125675 CDS Human protein_coding chrX:122551459 chrX:122551460 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_25985 0 0 0 1 0 Nucleus 0.438718597620799 0.438718599937593 0.0156573200000001 0 hPsi_site_19709 iPseU_CNN:0.0156573200000001;iRNA_PseU:0 19710 chr7 99786584 99786584 1 + C A LUSC 99786583 + 99786563 99786603 41 GGACGACCTCATCTCCCTGCTCACTGGCCTCTCAGACTCAC GGACGACCTCATCTCCCTGCTAACTGGCCTCTCAGACTCAC < 41bp 0.459790221487257 0.833350820111313 0.1833876 0.3608079 prediction 0.666701640222626 Functional Gain - STAG3 ENSG00000066923 CDS Human protein_coding chr7:99786583 chr7:99786584 synonymous SNV . 0 22 hPsi_associated_SNPs_25986 0 0 0 0 1 exosome 0.438779465354835 0.438704519057309 0 0 hPsi_site_19710 iPseU_CNN:0;iRNA_PseU:0 19711 chr7 6063250 6063250 1 + C T LUAD 6063251 - 6063231 6063271 41 CCTCATCCACCTCTGCACATTGGCTGGCACTGTCACACTGC CCTCATCCACCTCTGCACATTAGCTGGCACTGTCACACTGC < 41bp 0.436747583630841 0.833350191075697 0.21135396 0.4490608 prediction 0.666700382151394 Functional Gain - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063251 chr7:6063250 synonymous SNV . 0 22 hPsi_associated_SNPs_25987 0 0 1 1 0 Ribosome 0.438172014295777 0.438232318566563 0 0 hPsi_site_19711 iPseU_CNN:0;iRNA_PseU:0 19712 chr1 1221416 1221416 1 + G A TGCT 1221415 + 1221395 1221435 41 GCCCGCCTCGTTCCGGGAGCTGCTCACCTTCTTCTGCACCA GCCCGCCTCGTTCCGGGAGCTACTCACCTTCTTCTGCACCA < 41bp 0.565623120795547 0.898970749389319 0.62589854 0.9373847 prediction 0.666695257187543 Functional Gain - SCNN1D ENSG00000162572 CDS Human protein_coding chr1:1221415 chr1:1221416 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_25988 0 0 0 0 0 exosome 0.438720061226299 0.438719927299321 0.62297232 0 hPsi_site_19712 iPseU_CNN:0.62297232;iRNA_PseU:0 19713 chr7 138269634 138269634 1 + G A HNSC 138269633 + 138269613 138269653 41 TTTAGTGATGATTCAGATGATGACTTTGTACAGCCCCGGAA TTTAGTGATGATTCAGATGATAACTTTGTACAGCCCCGGAA < 41bp 0.440971921726464 0.833344761797664 0.2899453 0.38757688 prediction 0.666689523595329 Functional Gain - TRIM24 ENSG00000122779 CDS Human protein_coding chr7:138269633 chr7:138269634 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25989 0 0 1 0 0 Cytosol 0.43861982860159 0.438586759459541 0 0 hPsi_site_19713 iPseU_CNN:0;iRNA_PseU:0 19714 chr10 104230634 104230634 1 + C A CESC 104230633 + 104230613 104230653 41 TGCTGGCCGACCTGGCCCTCTCAGCCCACGACCGCACCCAC TGCTGGCCGACCTGGCCCTCTAAGCCCACGACCGCACCCAC < 41bp 0.46075155149148 0.833343266678806 0.22872534 0.58765066 prediction 0.666686533357611 Functional Gain - MFSD13A ENSG00000138111 CDS Human protein_coding chr10:104230633 chr10:104230634 stopgain 0.987 1 22 hPsi_associated_SNPs_25990 0 0 1 0 0 Ribosome 0.438718412889034 0.438718592989977 0.17530132 0 hPsi_site_19714 iPseU_CNN:0.17530132;iRNA_PseU:0 19715 chr20 42966005 42966005 1 + C A STAD 42966004 + 42965984 42966024 41 ATGAATGCCTTACTGGATTATCACAACCACATCCGGGCCAG ATGAATGCCTTACTGGATTATAACAACCACATCCGGGCCAG < 41bp 0.513640727501199 0.84698258501815 0.30846965 0.74032706 prediction 0.666683715033902 Functional Gain - R3HDML ENSG00000101074 CDS Human protein_coding chr20:42966004 chr20:42966005 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_25991 0 0 0 0 1 cytosol 0.438717020945019 0.43862857254674 0.48065412 0 hPsi_site_19715 iPseU_CNN:0.48065412;iRNA_PseU:0 19716 chr1 28293487 28293487 1 + G A STAD 28293486 + 28293466 28293506 41 CCACTGCAGCTGTGGCTGCCTGTGGGATGCGGCTGCTTCTT CCACTGCAGCTGTGGCTGCCTATGGGATGCGGCTGCTTCTT < 41bp 0.42963354794327 0.833337425924945 0.29984987 0.34503564 prediction 0.66667485184989 Functional Gain - XKR8 ENSG00000158156 CDS Human protein_coding chr1:28293486 chr1:28293487 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_25992 0 0 0 0 0 Endoplasmic reticulum 0.438718602693827 0.438718581779916 0 0 hPsi_site_19716 iPseU_CNN:0;iRNA_PseU:0 19717 chr11 62105605 62105605 1 + C A COAD 62105604 + 62105584 62105624 41 GGATGCCGTAGAGGGAGCTGTCGTCGCCCTGGAAGACGATC GGATGCCGTAGAGGGAGCTGTAGTCGCCCTGGAAGACGATC < 41bp 0.532583613155996 0.865913833192452 0.48765653 0.9313446 prediction 0.666660440072911 Functional Gain - ASRGL1 ENSG00000162174 CDS Human protein_coding chr11:62105604 chr11:62105605 synonymous SNV . 0 22 hPsi_associated_SNPs_25993 0 0 1 0 1 Ribosome 0.438718278467557 0.438717707137042 0.8626892 0 hPsi_site_19717 iPseU_CNN:0.8626892;iRNA_PseU:0 19718 chr1 155912316 155912316 1 + G A CESC 155912315 + 155912295 155912335 41 CACTCTCTGGGGTGTCCTGGTGAAGTTTGACCTGGTGCCCT CACTCTCTGGGGTGTCCTGGTAAAGTTTGACCTGGTGCCCT < 41bp 0.549376147981244 0.882701971318029 0.33591622 0.71295094 prediction 0.666651646673569 Functional Gain - RXFP4 ENSG00000173080 CDS Human protein_coding chr1:155912315 chr1:155912316 synonymous SNV . 0 22 hPsi_associated_SNPs_25994 0 0 0 0 0 exosome 0.438718592949012 0.438718592989139 0.42590188 0 hPsi_site_19718 iPseU_CNN:0.42590188;iRNA_PseU:0 19719 chr17 45788136 45788136 1 + G A rs531292016 45788135 + 45788115 45788155 41 TGCTACCGAGTCAACGTGTGTGCCATCTTCCCTGGTCCAGG TGCTACCGAGTCAACGTGTGTACCATCTTCCCTGGTCCAGG < 41bp 0.550834537471652 0.884157727033794 0.35020864 0.5708866 prediction 0.666646379124285 Functional Gain - TBKBP1 ENSG00000198933 UTR3 Human protein_coding chr17:45788135 chr17:45788136 . . 0 22 hPsi_associated_SNPs_25995 0 0 1 1 0 Cytosol 0.438716813486968 0.438713890415974 0.1417732 0 hPsi_site_19719 iPseU_CNN:0.1417732;iRNA_PseU:0 19720 chr7 63727018 63727018 1 + C A UCEC 63727017 + 63726997 63727037 41 GTGGCAAAGCCTTTAACTGCTCCTCAACCCTTAAGAAACAT GTGGCAAAGCCTTTAACTGCTACTCAACCCTTAAGAAACAT < 41bp 0.484886319271823 0.833318665930309 0.1831176 0.6104713 prediction 0.666637331860618 Functional Gain - ZNF679 ENSG00000197123 CDS Human protein_coding chr7:63727017 chr7:63727018 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_25996 0 0 0 0 0 unknown 0.438718592994099 0.438713958952955 0.2209426 0 hPsi_site_19720 iPseU_CNN:0.2209426;iRNA_PseU:0 19721 chr16 31477995 31477995 1 + G A READ 31477994 + 31477974 31478014 41 ATCCACCTGGGACCCCAGGGTGGCCCGGAGTCAGTGGGTGA ATCCACCTGGGACCCCAGGGTAGCCCGGAGTCAGTGGGTGA < 41bp 0.486862262569941 0.83331574859487 0.1530549 0.40283254 prediction 0.666631497189741 Functional Gain - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31477994 chr16:31477995 nonsynonymous SNV 0.353 0 22 hPsi_associated_SNPs_25997 0 0 1 0 0 cytosol 0.438552932410337 0.438718439483401 0 0 hPsi_site_19721 iPseU_CNN:0;iRNA_PseU:0 19722 chr1 12921254 12921254 1 + G A rs137965043 12921253 + 12921233 12921273 41 GCTCTGCTAGAGAAAATTGCTGCCTCTCTCGAGACCCTCGT GCTCTGCTAGAGAAAATTGCTACCTCTCTCGAGACCCTCGT < 41bp 0.555575782545742 0.888891423876981 0.28124642 0.5871589 prediction 0.666631282662477 Functional Gain - PRAMEF2 ENSG00000120952 CDS Human protein_coding chr1:12921253 chr1:12921254 nonsynonymous SNV 0.007 2 22 hPsi_associated_SNPs_25998 0 0 0 0 0 unknown 0.438718592927356 0.43871859304454 0.1743178 0 hPsi_site_19722 iPseU_CNN:0.1743178;iRNA_PseU:0 19723 chr1 28598238 28598238 1 + G A CESC 28598237 + 28598217 28598257 41 GCACCTGGGGCTGGAGGCACTGATGTCCTCTGGGCGAGTAG GCACCTGGGGCTGGAGGCACTAATGTCCTCTGGGCGAGTAG < 41bp 0.420398714538245 0.833303293334634 0.20308694 0.29339463 prediction 0.666606586669269 Functional Gain - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28598237 chr1:28598238 synonymous SNV . 0 22 hPsi_associated_SNPs_25999 0 0 1 0 1 Ribosome 0.438718592996414 0.438710410474775 0 0 hPsi_site_19723 iPseU_CNN:0;iRNA_PseU:0 19724 chr10 93621795 93621795 1 + C A ESCA 93621794 + 93621774 93621814 41 GGTAACCTTGGGAAAGTCTTTCCTGCAGTTCAGTGCAATGA GGTAACCTTGGGAAAGTCTTTACTGCAGTTCAGTGCAATGA < 41bp 0.479543966969464 0.833301903586024 0.32495427 0.6423599 prediction 0.666603807172047 Functional Gain - TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93621794 chr10:93621795 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26000 0 0 1 0 1 Ribosome 0.438718592943081 0.43871866586136 0.2847198 0 hPsi_site_19724 iPseU_CNN:0.2847198;iRNA_PseU:0 19725 chr22 21140341 21140341 1 + C A ACC 21140340 + 21140320 21140360 41 AAGCTGGAGAAGAACTACAATCTAGTGGAGTCCCTGAAGTT AAGCTGGAGAAGAACTACAATATAGTGGAGTCCCTGAAGTT < 41bp 0.517076898957292 0.850377230277067 0.33345675 0.3716982 prediction 0.66660066263955 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21140340 chr22:21140341 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_26001 0 0 1 0 2 cytosol 0.438508032903643 0.43842127130912 0 0 hPsi_site_19725 iPseU_CNN:0;iRNA_PseU:0 19726 chrX 152227083 152227083 1 + G A rs782011813 152227082 + 152227062 152227102 41 ACTGCATCCAGCACATGGGGTGCCTGGGCCTCAGATGGGGA ACTGCATCCAGCACATGGGGTACCTGGGCCTCAGATGGGGA < 41bp 0.466458955671447 0.833294949281345 0.2010611 0.5489588 prediction 0.66658989856269 Functional Gain - PNMA3 ENSG00000183837 UTR3 Human protein_coding chrX:152227082 chrX:152227083 . . 0 22 hPsi_associated_SNPs_26002 0 0 0 0 1 exosome 0.438721078097583 0.438718670603087 0.0979175999999999 0 hPsi_site_19726 iPseU_CNN:0.0979175999999999;iRNA_PseU:0 19727 chr13 39616394 39616394 1 + G A LUAD 39616393 + 39616373 39616413 41 GACACAGGAGATATTTACATTGTGGATGGAGATGGAGGATT GACACAGGAGATATTTACATTATGGATGGAGATGGAGGATT < 41bp 0.434518566164553 0.833285621475555 0.28668424 0.3237164 prediction 0.666571242951111 Functional Gain - NHLRC3 ENSG00000188811 CDS Human protein_coding chr13:39616393 chr13:39616394 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26003 0 0 1 0 1 Endoplasmic reticulum 0.438719987429378 0.438718746624457 0 0 hPsi_site_19727 iPseU_CNN:0;iRNA_PseU:0 19728 chr19 49485719 49485719 1 + G A rs74893260 49485718 + 49485698 49485738 41 CAAATCCCAGAAGCTATGGGTGGGGGGGCAGAGGATGTCTT CAAATCCCAGAAGCTATGGGTAGGGGGGCAGAGGATGTCTT < 41bp 0.504614067399619 0.837897119939821 0.35367358 0.5733962 prediction 0.666566105080405 Functional Gain - GYS1 ENSG00000104812 intronic Human protein_coding chr19:49485718 chr19:49485719 . . 0 22 hPsi_associated_SNPs_26004 0 0 0 0 0 Cytosol 0.438718568639674 0.43871859300057 0.1467924 0 hPsi_site_19728 iPseU_CNN:0.1467924;iRNA_PseU:0 19729 chr2 228783561 228783561 1 + G A SKCM 228783560 + 228783540 228783580 41 AAACTGGAAGGTCATGAAGGTGAAATTTCAAAGGTGAGTCG AAACTGGAAGGTCATGAAGGTAAAATTTCAAAGGTGAGTCG < 41bp 0.553232243790235 0.88650890110041 0.3260614 0.48449373 prediction 0.66655331462035 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228783560 chr2:228783561 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_26005 0 0 0 0 2 exosome 0.4387171896686 0.43874122522579 0 0 hPsi_site_19729 iPseU_CNN:0;iRNA_PseU:0 19730 chr9 134387467 134387467 1 + G A SKCM 134387466 + 134387446 134387486 41 CAGCTCCCACCAGCAACAGGTGACCTGTTACCCCTTCAAAG CAGCTCCCACCAGCAACAGGTAACCTGTTACCCCTTCAAAG < 41bp 0.412399766015948 0.833269128385188 0.28757364 0.67829657 prediction 0.666538256770375 Functional Gain - POMT1 ENSG00000130714 CDS Human protein_coding chr9:134387466 chr9:134387467 synonymous SNV . 0 22 hPsi_associated_SNPs_26006 0 0 1 0 2 Endoplasmic reticulum 0.438718589071808 0.438718593006293 0.35659314 0 hPsi_site_19730 iPseU_CNN:0.35659314;iRNA_PseU:0 19731 chr7 65554646 65554646 1 + G A UCEC 65554645 + 65554625 65554665 41 GTCAGACACTATGAGTGCCGTGCTCCAGGTGGCCACTGGCG GTCAGACACTATGAGTGCCGTACTCCAGGTGGCCACTGGCG < 41bp 0.414808138793643 0.833268227835899 0.33170298 0.76746565 prediction 0.666536455671797 Functional Gain - ASL ENSG00000126522;ENSG00000249319 CDS Human other chr7:65554645 chr7:65554646 synonymous SNV . 0 22 hPsi_associated_SNPs_26007 0 0 1 0 1 Ribosome 0.43957772717545 0.439265999957352 0.5349313 0 hPsi_site_19731 iPseU_CNN:0.5349313;iRNA_PseU:0 19732 chr1 223566990 223566990 1 + G A PRAD 223566989 + 223566969 223567009 41 CGGAGAGCGAAGCTGGGGCGTGCTGGCTGCACCCGCACTGT CGGAGAGCGAAGCTGGGGCGTACTGGCTGCACCCGCACTGT < 41bp 0.518341586645102 0.851608605177237 0.31679106 0.7298239 prediction 0.666534037064269 Functional Gain - CCDC185 ENSG00000178395 CDS Human protein_coding chr1:223566989 chr1:223566990 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26008 0 0 0 0 0 unknown 0.438718593720757 0.438718568142556 0.4596478 0 hPsi_site_19732 iPseU_CNN:0.4596478;iRNA_PseU:0 19733 chr8 11163810 11163810 1 + G A OV 11163809 + 11163789 11163829 41 GGAAAGCGTGGCTACATCATTGACACCCGATCCCTGAACGT GGAAAGCGTGGCTACATCATTAACACCCGATCCCTGAACGT < 41bp 0.569370903928677 0.902637265525053 0.2878468 0.4119856 prediction 0.666532723192752 Functional Gain - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11163809 chr8:11163810 nonsynonymous SNV 0.714 5 22 hPsi_associated_SNPs_26009 0 0 1 0 0 Ribosome 0.438569514415331 0.438790477554178 0 0 hPsi_site_19733 iPseU_CNN:0;iRNA_PseU:0 19734 chr2 220409581 220409581 1 + G A PAAD 220409580 + 220409560 220409600 41 GCCGGCCCTCGTCTGCATCATGTGCTGTTTGTTTGGAGTCG GCCGGCCCTCGTCTGCATCATATGCTGTTTGTTTGGAGTCG < 41bp 0.559939265816045 0.893202942517502 0.26174402 0.30770826 prediction 0.666527353402914 Functional Gain - TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220409580 chr2:220409581 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26010 0 0 1 0 1 chromatin 0.43910665368135 0.438774591856983 0 0 hPsi_site_19734 iPseU_CNN:0;iRNA_PseU:0 19735 chr12 55846629 55846629 1 + G A COAD 55846628 + 55846608 55846648 41 CACTCATTATCACCCTAGTTTGTGTGATTCTGTCCTACTTG CACTCATTATCACCCTAGTTTATGTGATTCTGTCCTACTTG < 41bp 0.46304739448792 0.833263632556053 0.36407536 0.6480154 prediction 0.666527265112107 Functional Gain - OR6C2 ENSG00000179695 CDS Human protein_coding chr12:55846628 chr12:55846629 nonsynonymous SNV 0.037 1 22 hPsi_associated_SNPs_26011 0 0 0 0 0 unknown 0.438718589033426 0.438718053891652 0.2960308 0 hPsi_site_19735 iPseU_CNN:0.2960308;iRNA_PseU:0 Cerebrospinal fluid α-synuclein levels 19736 chr15 40864067 40864067 1 + G A BLCA 40864066 + 40864046 40864086 41 GCCAAGACAGCTGCAGTCTCTGAGAGAATTCACGAGCAGGT GCCAAGACAGCTGCAGTCTCTAAGAGAATTCACGAGCAGGT < 41bp 0.422249462672784 0.833260286791699 0.33348832 0.48282266 prediction 0.666520573583399 Functional Gain - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40864066 chr15:40864067 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_26012 0 0 1 0 1 Cytosol 0.438788049562345 0.438765197282529 0 0 hPsi_site_19736 iPseU_CNN:0;iRNA_PseU:0 19737 chr12 7303159 7303159 1 + G A STAD 7303158 + 7303138 7303178 41 AGGGGTGGAGAGCATCACTGTGTATGAAGAGATCCTGAGGC AGGGGTGGAGAGCATCACTGTATATGAAGAGATCCTGAGGC < 41bp 0.567182254373059 0.900432735406741 0.42174494 0.7047057 prediction 0.666500962067364 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7303158 chr12:7303159 synonymous SNV . 0 22 hPsi_associated_SNPs_26013 0 0 1 0 1 Endoplasmic reticulum 0.43871854879457 0.438718587080958 0.4094114 0 hPsi_site_19737 iPseU_CNN:0.4094114;iRNA_PseU:0 19738 chr3 97487021 97487021 1 + G A SARC 97487020 + 97487000 97487040 41 GAGGTTCATGTTTTGTGCCTTGGGCTAGATAATAGTGGCAA GAGGTTCATGTTTTGTGCCTTAGGCTAGATAATAGTGGCAA < 41bp 0.445447450401689 0.833242085729394 0.26024634 0.4639818 prediction 0.666484171458788 Functional Gain - ARL6 ENSG00000113966 CDS Human protein_coding chr3:97487020 chr3:97487021 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26014 0 0 1 2 2 exosome 0.438718985124758 0.438605263380736 0 0 hPsi_site_19738 iPseU_CNN:0;iRNA_PseU:0 19739 chrX 57146310 57146310 1 + G T UCEC 57146311 - 57146291 57146331 41 TGATGATTTCCATATCTATGTCTACGATTTGGTGAAAAAGT TGATGATTTCCATATCTATGTATACGATTTGGTGAAAAAGT < 41bp 0.50483371860751 0.838071391645217 0.31508738 0.34217715 prediction 0.666475346075413 Functional Gain - SPIN2B ENSG00000186787 CDS Human protein_coding chrX:57146311 chrX:57146310 synonymous SNV . 0 22 hPsi_associated_SNPs_26015 0 0 0 0 0 exosome 0.439093638402074 0.43867377540431 0 0 hPsi_site_19739 iPseU_CNN:0;iRNA_PseU:0 19740 chr1 117638816 117638816 1 + G A UCEC 117638815 + 117638795 117638835 41 CATGCTGAAAGTTGTAGCATTGCACCTGAAGAAGCATGGAC CATGCTGAAAGTTGTAGCATTACACCTGAAGAAGCATGGAC < 41bp 0.431621733210107 0.833236233833961 0.2658208 0.34789342 prediction 0.666472467667921 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117638815 chr1:117638816 synonymous SNV . 0 22 hPsi_associated_SNPs_26016 0 0 1 0 0 Nucleus 0.438560663542833 0.439737164567361 0 0 hPsi_site_19740 iPseU_CNN:0;iRNA_PseU:0 19741 chr3 148601512 148601512 1 + C A UCEC 148601511 + 148601491 148601531 41 TAGAAGCCACCTGAATGAAATCAAGGTTTACATCACCTTCC TAGAAGCCACCTGAATGAAATAAAGGTTTACATCACCTTCC < 41bp 0.482739687100913 0.833235497596687 0.21447274 0.5383288 prediction 0.666470995193374 Functional Gain - CPA3 ENSG00000163751 CDS Human protein_coding chr3:148601511 chr3:148601512 synonymous SNV . 0 22 hPsi_associated_SNPs_26017 0 0 0 0 1 Endoplasmic reticulum 0.438718515662994 0.438718592995394 0.0766576000000001 0 hPsi_site_19741 iPseU_CNN:0.0766576000000001;iRNA_PseU:0 19742 chr7 129357148 129357148 1 + G A LUSC 129357147 + 129357127 129357167 41 CACCCAGGCGGTGGCATCGTTGGCAGAGGCCGCAGTGGCAG CACCCAGGCGGTGGCATCGTTAGCAGAGGCCGCAGTGGCAG < 41bp 0.412995887298771 0.833235310323495 0.26996973 0.646703 prediction 0.666470620646989 Functional Gain - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129357147 chr7:129357148 synonymous SNV . 0 22 hPsi_associated_SNPs_26018 0 0 1 0 2 chromatin 0.438668755363357 0.438713993807257 0.293406 0 hPsi_site_19742 iPseU_CNN:0.293406;iRNA_PseU:0 19743 chr19 48255813 48255813 1 + G A rs140894234 48255812 + 48255792 48255832 41 GCCGTCCCAGGCACCCGCCGTGGAGGTGGCGCCTGCCGGAG GCCGTCCCAGGCACCCGCCGTAGAGGTGGCGCCTGCCGGAG < 41bp 0.407187011644376 0.833234621929874 0.3056411 0.87371457 prediction 0.666469243859747 Functional Gain - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48255812 chr19:48255813 synonymous SNV . 0 22 hPsi_associated_SNPs_26019 0 0 1 0 2 unknown 0.438718486402861 0.438709011298459 0.74742914 0 hPsi_site_19743 iPseU_CNN:0.74742914;iRNA_PseU:0 19744 chr14 23848042 23848042 1 + G A rs76093393 23848041 + 23848021 23848061 41 GCCTGGCTTCTGGTCCTGGTTGCTCTGGTTCATCTGCTTCC GCCTGGCTTCTGGTCCTGGTTACTCTGGTTCATCTGCTTCC < 41bp 0.555873316923508 0.88910371045896 0.2749349 0.71639824 prediction 0.666460787070903 Functional Gain - CMTM5 ENSG00000166091 CDS Human protein_coding chr14:23848041 chr14:23848042 synonymous SNV . 0 22 hPsi_associated_SNPs_26020 0 0 0 0 0 exosome 0.438727931496725 0.438895897273156 0.43279648 0 hPsi_site_19744 iPseU_CNN:0.43279648;iRNA_PseU:0 19745 chrX 102632641 102632641 1 + G A BRCA 102632640 + 102632620 102632660 41 GGAAATATTCATGGAGGAGATGAGAGAAATCAGAAGAAAAC GGAAATATTCATGGAGGAGATAAGAGAAATCAGAAGAAAAC < 41bp 0.548819447757001 0.882048598617283 0.28276283 0.42971835 prediction 0.666458301720563 Functional Gain - BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632640 chrX:102632641 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26021 0 0 1 0 0 Cytosol 0.438719068535691 0.438718593714134 0 0 hPsi_site_19745 iPseU_CNN:0;iRNA_PseU:0 19746 chr4 56766014 56766014 1 + C A UCEC 56766013 + 56765993 56766033 41 AGATCACCTTCAGTCTTATGTCATTTACTCTTTAGGACAAC AGATCACCTTCAGTCTTATGTAATTTACTCTTTAGGACAAC < 41bp 0.504683610901373 0.837908805507768 0.27906108 0.5855881 prediction 0.666450389212789 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56766013 chr4:56766014 synonymous SNV . 0 22 hPsi_associated_SNPs_26022 0 0 1 0 1 Cytosol 0.439020236892319 0.438723450640593 0.1711762 0 hPsi_site_19746 iPseU_CNN:0.1711762;iRNA_PseU:0 19747 chr10 102120627 102120627 1 + C A UCEC 102120626 + 102120606 102120646 41 GGCCTATGACCGGAAGAAAGTCTCCAAGGCCGCCATCTTGG GGCCTATGACCGGAAGAAAGTATCCAAGGCCGCCATCTTGG < 41bp 0.482908736869007 0.833221493791733 0.28588483 0.6254082 prediction 0.666442987583467 Functional Gain - SCD ENSG00000099194 CDS Human protein_coding chr10:102120626 chr10:102120627 synonymous SNV . 0 22 hPsi_associated_SNPs_26023 0 0 1 0 0 Ribosome 0.438718593084832 0.438718592711658 0.2508164 0 hPsi_site_19747 iPseU_CNN:0.2508164;iRNA_PseU:0 19748 chr2 74146639 74146639 1 + G A COAD 74146638 + 74146618 74146658 41 TCTCTCCACCTTCCAGCAGATGTGGATCAGCAAGCCTGAGT TCTCTCCACCTTCCAGCAGATATGGATCAGCAAGCCTGAGT < 41bp 0.563288905742446 0.896509675582571 0.23936832 0.4154253 prediction 0.666441539680251 Functional Gain - ACTG2 ENSG00000163017 CDS Human protein_coding chr2:74146638 chr2:74146639 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26024 0 0 0 0 1 Cytosol 0.438726697416754 0.438778680099911 0 0 hPsi_site_19748 iPseU_CNN:0;iRNA_PseU:0 19749 chr2 110373350 110373350 1 + C A UCEC 110373349 + 110373329 110373369 41 GCATCTCATCACCTACAAACTCTCACACGCCCTAGAAGATG GCATCTCATCACCTACAAACTATCACACGCCCTAGAAGATG < 41bp 0.48960131995657 0.833220361955568 0.2875278 0.35394776 prediction 0.666440723911137 Functional Gain - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373349 chr2:110373350 synonymous SNV . 0 22 hPsi_associated_SNPs_26025 0 0 1 0 0 Ribosome 0.437602615063418 0.439049400898026 0 0 hPsi_site_19749 iPseU_CNN:0;iRNA_PseU:0 19750 chr9 131568159 131568159 1 + C A GBM 131568158 + 131568138 131568178 41 CAAGAGCAGAACATCAAGCCTCAGTTCTTTGCCTTCCGCTG CAAGAGCAGAACATCAAGCCTAAGTTCTTTGCCTTCCGCTG < 41bp 0.469148270054691 0.833218423674214 0.42316484 0.4690022 prediction 0.666436847348427 Functional Gain - TBC1D13 ENSG00000107021 CDS Human protein_coding chr9:131568158 chr9:131568159 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_26026 0 0 1 0 1 Cytosol 0.43871827615483 0.438719062308911 0 0 hPsi_site_19750 iPseU_CNN:0;iRNA_PseU:0 19751 chr10 98743699 98743699 1 + C A BLCA 98743698 + 98743678 98743718 41 GGTCACGGAAATGTAGGAGTTCATTGGAGAGTCAGAAGTGT GGTCACGGAAATGTAGGAGTTAATTGGAGAGTCAGAAGTGT < 41bp 0.505888788315902 0.83910250948358 0.28418303 0.76406246 prediction 0.666427442335355 Functional Gain - LCOR ENSG00000155640 CDS Human other chr10:98743698 chr10:98743699 stopgain 0.001 0 22 hPsi_associated_SNPs_26027 0 0 1 0 0 Ribosome 0.43873185968121 0.438718733878553 0.52812492 0 hPsi_site_19751 iPseU_CNN:0.52812492;iRNA_PseU:0 19752 chr1 1269301 1269301 1 + G A BLCA 1269300 + 1269280 1269320 41 TCTGAGCTGGGCAGACCGGCTGAGTGGCTGCCTGCGGGGGC TCTGAGCTGGGCAGACCGGCTAAGTGGCTGCCTGCGGGGGC < 41bp 0.552234614842158 0.885444463191461 0.30729115 0.8652327 prediction 0.666419696698604 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269300 chr1:1269301 synonymous SNV . 0 22 hPsi_associated_SNPs_26028 0 0 1 0 0 chromatin 0.438718428793373 0.438717895612078 0.7304654 0 hPsi_site_19752 iPseU_CNN:0.7304654;iRNA_PseU:0 19753 chr3 12859017 12859017 1 + G A BLCA 12859016 + 12858996 12859036 41 GCCAGGCCACCAGCGGGAGCTGAAGGCGGTGCTCCTGGAAG GCCAGGCCACCAGCGGGAGCTAAAGGCGGTGCTCCTGGAAG < 41bp 0.561087079462016 0.894292832356187 0.31755063 0.5634247 prediction 0.666411505788342 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12859016 chr3:12859017 synonymous SNV . 0 22 hPsi_associated_SNPs_26029 0 0 0 0 0 chromatin 0.438855197773756 0.438718270561371 0.1268494 0 hPsi_site_19753 iPseU_CNN:0.1268494;iRNA_PseU:0 19754 chr16 27455949 27455949 1 + G A LUAD 27455948 + 27455928 27455968 41 CAAAGACTCGAGCTATGAGCTGCAGGTGCGGGCAGGGCCCA CAAAGACTCGAGCTATGAGCTACAGGTGCGGGCAGGGCCCA < 41bp 0.410872149438434 0.833205459965579 0.21433288 0.6288518 prediction 0.666410919931158 Functional Gain - IL21R ENSG00000103522 CDS Human protein_coding chr16:27455948 chr16:27455949 synonymous SNV . 0 22 hPsi_associated_SNPs_26030 0 0 0 0 0 nucleus 0.438718591965671 0.438718594413958 0.2577036 0 hPsi_site_19754 iPseU_CNN:0.2577036;iRNA_PseU:0 19755 chr9 100331211 100331211 1 + G A HNSC 100331210 + 100331190 100331230 41 GCTCAAGGAGAACAAGGTGTTGAAGACACTGAATGTGGAAT GCTCAAGGAGAACAAGGTGTTAAAGACACTGAATGTGGAAT < 41bp 0.415139910171215 0.833204029724092 0.50675285 0.70950043 prediction 0.666408059448184 Functional Gain - TMOD1 ENSG00000136842 CDS Human protein_coding chr9:100331210 chr9:100331211 synonymous SNV . 0 22 hPsi_associated_SNPs_26031 0 0 1 0 1 Ribosome 0.438735165590171 0.438739070489904 0.40549516 0 hPsi_site_19755 iPseU_CNN:0.40549516;iRNA_PseU:0 19756 chr9 32634638 32634638 1 + C A UCEC 32634637 + 32634617 32634657 41 GGGGTGGTGGTGGAGCATAGTCATAGTTCCACAAAGACTTC GGGGTGGTGGTGGAGCATAGTAATAGTTCCACAAAGACTTC < 41bp 0.496835100198419 0.833198142694091 0.15668541 0.2726498 prediction 0.666396285388181 Functional Gain - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634637 chr9:32634638 nonsynonymous SNV 0.418 2 22 hPsi_associated_SNPs_26032 0 0 0 0 0 exosome 0.438724902794839 0.438718888088001 0 0 hPsi_site_19756 iPseU_CNN:0;iRNA_PseU:0 19757 chr5 33467697 33467697 1 + G A CESC 33467696 + 33467676 33467716 41 AAAGAGAAAATCAGTGGCACTGTTAATATCCGCACAAGAGA AAAGAGAAAATCAGTGGCACTATTAATATCCGCACAAGAGA < 41bp 0.443715115309946 0.833197771303114 0.29243508 0.4472298 prediction 0.666395542606229 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33467696 chr5:33467697 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_26033 0 0 1 0 1 Nucleus 0.438201892418763 0.438333957137982 0 0 hPsi_site_19757 iPseU_CNN:0;iRNA_PseU:0 19758 chr17 4352582 4352582 1 + G A SKCM 4352581 + 4352561 4352601 41 ACCGCCATGGCCTTTGTGACTGGAGCCCTGGGGTTCTGGGC ACCGCCATGGCCTTTGTGACTAGAGCCCTGGGGTTCTGGGC < 41bp 0.417145682983063 0.833192115235519 0.30949205 0.37552452 prediction 0.666384230471037 Functional Gain - SPNS3 ENSG00000182557 CDS Human protein_coding chr17:4352581 chr17:4352582 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_26034 0 0 0 0 1 exosome 0.438718593048912 0.438718645432037 0 0 hPsi_site_19758 iPseU_CNN:0;iRNA_PseU:0 19759 chr2 68882322 68882322 1 + G A SKCM 68882321 + 68882301 68882341 41 CTCTGGTTCAAGGCGGTCCCTGGATTCCAGACAGAGCAGAT CTCTGGTTCAAGGCGGTCCCTAGATTCCAGACAGAGCAGAT < 41bp 0.426340632555326 0.833190747051539 0.37481707 0.6057192 prediction 0.666381494103077 Functional Gain - PROKR1 ENSG00000169618 CDS Human protein_coding chr2:68882321 chr2:68882322 nonsynonymous SNV 0.031 4 22 hPsi_associated_SNPs_26035 0 0 0 0 0 exosome 0.43871750696829 0.438718427084497 0.2114384 0 hPsi_site_19759 iPseU_CNN:0.2114384;iRNA_PseU:0 19760 chrX 151869755 151869755 1 + G A LUAD 151869754 + 151869734 151869774 41 AATTGGCAGTACTTCTTTCCTGTGATCTTCAGCAAAGCTTC AATTGGCAGTACTTCTTTCCTATGATCTTCAGCAAAGCTTC < 41bp 0.554293902973218 0.887484411894272 0.24962696 0.3058583 prediction 0.666381017842108 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869754 chrX:151869755 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_26036 0 0 1 0 0 Ribosome 0.438719151591854 0.438720110816139 0 0 hPsi_site_19760 iPseU_CNN:0;iRNA_PseU:0 19761 chr5 110710584 110710584 1 + C A COAD 110710583 + 110710563 110710603 41 GTAAGAACTGAGATAGGAGTTCTTCTTCGCCTCTCACATCC GTAAGAACTGAGATAGGAGTTATTCTTCGCCTCTCACATCC < 41bp 0.487540245289552 0.833189627795246 0.47653458 0.64061713 prediction 0.666379255590491 Functional Gain - CAMK4 ENSG00000152495 CDS Human protein_coding chr5:110710583 chr5:110710584 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26037 0 0 0 0 2 chromatin 0.435206906636761 0.438754871630983 0.28123426 0 hPsi_site_19761 iPseU_CNN:0.28123426;iRNA_PseU:0 19762 chr20 23016878 23016878 1 + C A PAAD 23016877 + 23016857 23016897 41 GCTGGCAGCAGCGCAGGCGCTCGGAGAAGAAAATCACCAGG GCTGGCAGCAGCGCAGGCGCTAGGAGAAGAAAATCACCAGG < 41bp 0.503394957931093 0.836580572564259 0.12096962 0.3184539 prediction 0.666371229266332 Functional Gain - SSTR4 ENSG00000132671 CDS Human protein_coding chr20:23016877 chr20:23016878 stopgain 0.796 0 22 hPsi_associated_SNPs_26038 0 0 0 0 0 exosome 0.43904389790556 0.438506719221537 0 0 hPsi_site_19762 iPseU_CNN:0;iRNA_PseU:0 19763 chr8 67086827 67086827 1 + G A SKCM 67086826 + 67086806 67086846 41 GGTTGAACTCCCTAAATGAATGATATTCATTCCAACTGCTG GGTTGAACTCCCTAAATGAATAATATTCATTCCAACTGCTG < 41bp 0.464251725768228 0.833184227876464 0.22168455 0.34392273 prediction 0.666368455752927 Functional Gain - TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67086826 chr8:67086827 synonymous SNV . 0 22 hPsi_associated_SNPs_26039 0 0 0 6 0 exosome 0.438718592995102 0.438718126510778 0 0 hPsi_site_19763 iPseU_CNN:0;iRNA_PseU:0 19764 chr10 95279441 95279441 1 + G A UCEC 95279440 + 95279420 95279460 41 TGTTCTGGGCCTTTTCCAGATGCAGGCATGTACTTTAGACT TGTTCTGGGCCTTTTCCAGATACAGGCATGTACTTTAGACT < 41bp 0.429296066499699 0.833178457898617 0.14989644 0.18886083 prediction 0.666356915797234 Functional Gain - CEP55 ENSG00000138180 CDS Human protein_coding chr10:95279440 chr10:95279441 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_26040 0 0 1 0 1 Ribosome 0.439894243547744 0.438785068766159 0 0 hPsi_site_19764 iPseU_CNN:0;iRNA_PseU:0 19765 chr7 142989485 142989485 1 + G A BLCA 142989484 + 142989464 142989504 41 TGATGCCTTCTGTGAAGCACTGAGGGAGACCAAGCAAGGCC TGATGCCTTCTGTGAAGCACTAAGGGAGACCAAGCAAGGCC < 41bp 0.414695489620046 0.833177978031088 0.21025273 0.24552804 prediction 0.666355956062176 Functional Gain - CASP2 ENSG00000106144 CDS Human protein_coding chr7:142989484 chr7:142989485 synonymous SNV . 0 22 hPsi_associated_SNPs_26041 0 0 1 0 2 Nucleus 0.438718647862997 0.438719953168747 0 0 hPsi_site_19765 iPseU_CNN:0;iRNA_PseU:0 19766 chr10 104415028 104415028 1 + G A STAD 104415027 + 104415007 104415047 41 CAAGAAGCTGCTGGGCTCCCTGCAGCTGCTCTTTGATAAGA CAAGAAGCTGCTGGGCTCCCTACAGCTGCTCTTTGATAAGA < 41bp 0.426990557049319 0.833177045940567 0.28141782 0.36682782 prediction 0.666354091881134 Functional Gain - TRIM8 ENSG00000171206 CDS Human protein_coding chr10:104415027 chr10:104415028 synonymous SNV . 0 22 hPsi_associated_SNPs_26042 0 0 1 0 1 Endoplasmic reticulum 0.438718604483201 0.438718430150181 0 0 hPsi_site_19766 iPseU_CNN:0;iRNA_PseU:0 19767 chr22 24323212 24323212 1 + C A UCEC 24323211 + 24323191 24323231 41 GACGCTCAAGGATGGTGATTTCATCTTGACCGAAAGGTGCC GACGCTCAAGGATGGTGATTTAATCTTGACCGAAAGGTGCC < 41bp 0.532838626005546 0.8660098949188 0.286817 0.5722347 prediction 0.666342537826509 Functional Gain - GSTT2;GSTT2B ENSG00000099984 CDS Human polymorphic_pseudogene chr22:24323211 chr22:24323212 nonsynonymous SNV 0.079 3 22 hPsi_associated_SNPs_26043 0 0 0 0 2 unknown 0.438271733224895 0.438718514769775 0.1444694 0 hPsi_site_19767 iPseU_CNN:0.1444694;iRNA_PseU:0 19768 chr18 8819111 8819111 1 + G A LUSC 8819110 + 8819090 8819130 41 GATGCTGACTCCATCCCGTTTGAAGACCGGCCGCTGTCCAA GATGCTGACTCCATCCCGTTTAAAGACCGGCCGCTGTCCAA < 41bp 0.408413445889362 0.833166289141244 0.6263975 0.8126147 prediction 0.666332578282487 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8819110 chr18:8819111 nonsynonymous SNV 0.853 1 22 hPsi_associated_SNPs_26044 0 0 1 0 1 Nucleus 0.438718593035078 0.438703037072322 0.3724344 0 hPsi_site_19768 iPseU_CNN:0.3724344;iRNA_PseU:0 19769 chr3 47364083 47364083 1 + G T STAD 47364082 + 47364062 47364102 41 CTGGAGGCTCTGATCAACTTTGCCTACAACGGCAACCTTGC CTGGAGGCTCTGATCAACTTTTCCTACAACGGCAACCTTGC < 41bp 0.50104032488691 0.834205034223123 0.27592874 0.6711656 prediction 0.666329418672426 Functional Gain - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47364082 chr3:47364083 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_26045 0 0 1 0 1 Cytosol 0.438718257652614 0.438718496009389 0.3423312 0 hPsi_site_19769 iPseU_CNN:0.3423312;iRNA_PseU:0 19770 chr7 74197972 74197972 1 + G A COAD 74197971 + 74197951 74197991 41 GAAGACCCTGAGCCCAACTATGCAGGTGCCCCCTGCCCTCC GAAGACCCTGAGCCCAACTATACAGGTGCCCCCTGCCCTCC < 41bp 0.56931166012806 0.90247574472898 0.268942 0.6243971 prediction 0.666328169201839 Functional Gain - NCF1 ENSG00000158517 CDS Human protein_coding chr7:74197971 chr7:74197972 nonsynonymous SNV 0.964 0 22 hPsi_associated_SNPs_26046 0 0 0 2 0 exosome 0.438718593752461 0.438718642782393 0.2487942 0 hPsi_site_19770 iPseU_CNN:0.2487942;iRNA_PseU:0 19771 chrX 100490939 100490939 1 + G A LGG 100490938 + 100490918 100490958 41 CTGTTGAACGGGTCTGTTGGTGCCTCTGGACCCCTGGAACC CTGTTGAACGGGTCTGTTGGTACCTCTGGACCCCTGGAACC < 41bp 0.411120903463564 0.833159961265303 0.29114732 0.74326646 prediction 0.666319922530606 Functional Gain - DRP2 ENSG00000102385 CDS Human protein_coding chrX:100490938 chrX:100490939 nonsynonymous SNV 0.727 0 22 hPsi_associated_SNPs_26047 0 0 0 0 2 nucleoplasm 0.438718592979969 0.438718590985816 0.48653292 0 hPsi_site_19771 iPseU_CNN:0.48653292;iRNA_PseU:0 19772 chr11 27016157 27016157 1 + G A UCEC 27016156 + 27016136 27016176 41 TGGCCCCCTCTACCCAGAGATGTCCAATGGGACTCTGCACC TGGCCCCCTCTACCCAGAGATATCCAATGGGACTCTGCACC < 41bp 0.433803000965757 0.833159593960094 0.27957827 0.36668587 prediction 0.666319187920189 Functional Gain - FIBIN ENSG00000176971 CDS Human protein_coding chr11:27016156 chr11:27016157 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26048 0 0 0 0 0 exosome 0.438718592931267 0.43871859293558 0 0 hPsi_site_19772 iPseU_CNN:0;iRNA_PseU:0 19773 chr16 31121745 31121745 1 + C A UCEC 31121744 + 31121724 31121764 41 TGAAAAGCTCGTCCGCTACTTCTTGGACAAGACGCTGACTT TGAAAAGCTCGTCCGCTACTTATTGGACAAGACGCTGACTT < 41bp 0.534214863046663 0.867374101000356 0.44380522 0.71290743 prediction 0.666318475907387 Functional Gain - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121744 chr16:31121745 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_26049 0 0 1 0 2 Ribosome 0.438724619930631 0.438735379926174 0.42581486 0 hPsi_site_19773 iPseU_CNN:0.42581486;iRNA_PseU:0 19774 chr2 85590247 85590247 1 + C A UCEC 85590246 + 85590226 85590266 41 GAGTTGAAGAACCATGGCATTCTCCAGGCTCTGACCACAGA GAGTTGAAGAACCATGGCATTATCCAGGCTCTGACCACAGA < 41bp 0.46981011127974 0.833147568029544 0.6088086 0.7592272 prediction 0.666295136059089 Functional Gain - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85590246 chr2:85590247 nonsynonymous SNV 0.983 3 22 hPsi_associated_SNPs_26050 0 0 1 0 2 Cytosol 0.447518977240209 0.438697315043645 0.3008372 0 hPsi_site_19774 iPseU_CNN:0.3008372;iRNA_PseU:0 19775 chr18 63547942 63547942 1 + G A UCEC 63547941 + 63547921 63547961 41 GAAGCCGATGTTGATCCTGGTGCTCCTCCTTATGACTCCCT GAAGCCGATGTTGATCCTGGTACTCCTCCTTATGACTCCCT < 41bp 0.439744111484839 0.833146633400669 0.31022567 0.8872 prediction 0.666293266801338 Functional Gain - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63547941 chr18:63547942 nonsynonymous SNV 0.024 4 22 hPsi_associated_SNPs_26051 0 0 0 0 0 exosome 0.43871843080792 0.438714793571646 0.7744 0 hPsi_site_19775 iPseU_CNN:0.7744;iRNA_PseU:0 19776 chr11 114320696 114320696 1 + G A GBM 114320695 + 114320675 114320715 41 AAAATGAGAAGACCGTGAGTTGATGCCAGTTATCATGCTGC AAAATGAGAAGACCGTGAGTTAATGCCAGTTATCATGCTGC < 41bp 0.551967505117903 0.885111490396129 0.18082714 0.39848703 prediction 0.666287970556451 Functional Gain - REXO2 ENSG00000076043 CDS Human protein_coding chr11:114320695 chr11:114320696 synonymous SNV . 0 22 hPsi_associated_SNPs_26052 0 0 1 2 0 Ribosome 0.438718174741331 0.439366879764683 0 0 hPsi_site_19776 iPseU_CNN:0;iRNA_PseU:0 19777 chr1 32050325 32050325 1 + C A UCEC 32050324 + 32050304 32050344 41 TTCCCACAGCCTTCGAGGCCTCTGAGAAGTGGCCCAACCTG TTCCCACAGCCTTCGAGGCCTATGAGAAGTGGCCCAACCTG < 41bp 0.464928383973649 0.833140817818419 0.27218944 0.51484984 prediction 0.666281635636839 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32050324 chr1:32050325 nonsynonymous SNV 0.694 3 22 hPsi_associated_SNPs_26053 0 0 1 0 2 Ribosome 0.438717870005422 0.438716897529742 0.02969968 0 hPsi_site_19777 iPseU_CNN:0.02969968;iRNA_PseU:0 19778 chr18 19359504 19359504 1 + C A UCEC 19359503 + 19359483 19359523 41 GGTGACCTGGTAAATATAGATCTCGACCTCGAAATTGTACA GGTGACCTGGTAAATATAGATATCGACCTCGAAATTGTACA < 41bp 0.510144873789285 0.84328495888018 0.24156386 0.34962726 prediction 0.66628017018179 Functional Gain - MIB1 ENSG00000101752 CDS Human protein_coding chr18:19359503 chr18:19359504 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26054 0 0 1 0 1 Nucleus 0.438718592995088 0.438718592997185 0 0 hPsi_site_19778 iPseU_CNN:0;iRNA_PseU:0 19779 chr10 134151116 134151116 1 + C A UCEC 134151115 + 134151095 134151135 41 GTGTGTGATTCCTCAAGATTTCTTTCAGTTGCTTCCGAACC GTGTGTGATTCCTCAAGATTTATTTCAGTTGCTTCCGAACC < 41bp 0.531806165407337 0.864944402596829 0.62621796 0.58637697 prediction 0.666276474378985 Functional Gain - LRRC27 ENSG00000148814 CDS Human protein_coding chr10:134151115 chr10:134151116 nonsynonymous SNV 0.779 3 22 hPsi_associated_SNPs_26055 0 0 1 0 2 Nucleus 0.438718590521959 0.438718463165066 0 0 hPsi_site_19779 iPseU_CNN:0;iRNA_PseU:0 19780 chr9 131262505 131262505 1 + C A BRCA 131262504 + 131262484 131262524 41 TCCACCTTCCTGACTAGCTCTCCCATCCGCTCCCGATCTCC TCCACCTTCCTGACTAGCTCTACCATCCGCTCCCGATCTCC < 41bp 0.501926206145767 0.835063522070801 0.12395662 0.31293893 prediction 0.666274631850068 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131262504 chr9:131262505 nonsynonymous SNV 0.989 3 22 hPsi_associated_SNPs_26056 0 0 1 0 0 Cytosol 0.438718611455424 0.43871329723885 0 0 hPsi_site_19780 iPseU_CNN:0;iRNA_PseU:0 19781 chr1 67861449 67861449 1 + C A UCEC 67861448 + 67861428 67861468 41 AGCCCACCACCTCCAAGAGCTCTCCAAGCTGAGAGCAGACA AGCCCACCACCTCCAAGAGCTATCCAAGCTGAGAGCAGACA < 41bp 0.521593622728102 0.854728799210147 0.2628886 0.3083434 prediction 0.66627035296409 Functional Gain - IL12RB2 ENSG00000081985 CDS Human protein_coding chr1:67861448 chr1:67861449 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_26057 0 0 0 0 0 cytosol 0.438718592995103 0.438718621673588 0 0 hPsi_site_19781 iPseU_CNN:0;iRNA_PseU:0 19782 chr16 88873561 88873561 1 + G A UCEC 88873560 + 88873540 88873580 41 ACCCCACCAGCCACCCCGCCTGCAGCCTCTCCCAGTGCTCT ACCCCACCAGCCACCCCGCCTACAGCCTCTCCCAGTGCTCT < 41bp 0.430769226109844 0.833130880868398 0.4918924 0.76337683 prediction 0.666261761736796 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88873560 chr16:88873561 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26058 0 0 1 0 1 Cytosol 0.438718573777533 0.438709988594977 0.52675366 0 hPsi_site_19782 iPseU_CNN:0.52675366;iRNA_PseU:0 19783 chr15 34356399 34356399 1 + G A UCEC 34356398 + 34356378 34356418 41 ATAGCACTGTCAACCCCATCTGCTATGCCCTCTGCAACAGA ATAGCACTGTCAACCCCATCTACTATGCCCTCTGCAACAGA < 41bp 0.443169334026292 0.833127616363463 0.35740373 0.64614516 prediction 0.666255232726926 Functional Gain - CHRM5 ENSG00000184984 CDS Human protein_coding chr15:34356398 chr15:34356399 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_26059 0 0 0 0 0 cytosol 0.438748749424679 0.437800978958304 0.29229032 0 hPsi_site_19783 iPseU_CNN:0.29229032;iRNA_PseU:0 19784 chrX 30269105 30269105 1 + G A LUSC 30269104 + 30269084 30269124 41 GCTCGTCTTTGGCCTTGATTTGAAGGAAGACAACCCTAGTG GCTCGTCTTTGGCCTTGATTTAAAGGAAGACAACCCTAGTG < 41bp 0.422720406824326 0.833126772715457 0.34098384 0.71710217 prediction 0.666253545430913 Functional Gain - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30269104 chrX:30269105 synonymous SNV . 0 22 hPsi_associated_SNPs_26060 0 0 1 0 0 nucleolus 0.438717834962489 0.438719686765826 0.43420434 0 hPsi_site_19784 iPseU_CNN:0.43420434;iRNA_PseU:0 19785 chr1 151665935 151665935 1 + C A UCEC 151665934 + 151665914 151665954 41 TGAGTGCTTCGAGAGGGTGTTCTGCGAGCTCAAGTGGAGAA TGAGTGCTTCGAGAGGGTGTTATGCGAGCTCAAGTGGAGAA < 41bp 0.47890129417939 0.833126156078398 0.27972585 0.6250528 prediction 0.666252312156795 Functional Gain - SNX27 ENSG00000143376 CDS Human protein_coding chr1:151665934 chr1:151665935 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26061 0 0 1 0 2 Ribosome 0.438971755976586 0.465332097327903 0.2501056 0 hPsi_site_19785 iPseU_CNN:0.2501056;iRNA_PseU:0 19786 chr15 83805347 83805347 1 + C A HNSC 83805346 + 83805326 83805366 41 AACATAGCATATGGAGTTCTTCCTCAGCTCTTGGCCTATCG AACATAGCATATGGAGTTCTTACTCAGCTCTTGGCCTATCG < 41bp 0.503890418847294 0.837012957541057 0.28813696 0.5923939 prediction 0.666245077387526 Functional Gain - TM6SF1 ENSG00000136404 CDS Human protein_coding chr15:83805346 chr15:83805347 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26062 0 0 0 1 0 chromatin 0.438725171064526 0.438720707864397 0.1847878 0 hPsi_site_19786 iPseU_CNN:0.1847878;iRNA_PseU:0 19787 chr1 158985706 158985706 1 + G A rs140368446 158985705 + 158985685 158985725 41 AAGAGGAAGAAGGAAGTGGATGCTACTTCACCTGCACCCTC AAGAGGAAGAAGGAAGTGGATACTACTTCACCTGCACCCTC < 41bp 0.438532295201511 0.833121398335745 0.6529963 0.83443487 prediction 0.666242796671489 Functional Gain - IFI16 ENSG00000163565 CDS Human protein_coding chr1:158985705 chr1:158985706 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26063 0 0 0 0 2 exosome 0.43870867369667 0.438717104873676 0.36287714 0 hPsi_site_19787 iPseU_CNN:0.36287714;iRNA_PseU:0 19788 chr14 93401530 93401530 1 + G A rs138325018 93401529 + 93401509 93401549 41 TCCTATCCACTGGGCACAACTGCAATAACTTCTGACCTTTT TCCTATCCACTGGGCACAACTACAATAACTTCTGACCTTTT < 41bp 0.510853675621532 0.843974421981048 0.19329098 0.25207886 prediction 0.666241492719031 Functional Gain - CHGA ENSG00000100604 UTR3 Human protein_coding chr14:93401529 chr14:93401530 . . 0 22 hPsi_associated_SNPs_26064 0 0 0 6 0 exosome 0.438718144012425 0.43871471682065 0 0 hPsi_site_19788 iPseU_CNN:0;iRNA_PseU:0 19789 chr1 27660657 27660657 1 + G A BLCA 27660656 + 27660636 27660676 41 CTCCAGCACAATCTCTGCTGTGACAACTGCCACTCGCACGT CTCCAGCACAATCTCTGCTGTAACAACTGCCACTCGCACGT < 41bp 0.428935280830705 0.833115899268912 0.3578177 0.56031436 prediction 0.666231798537823 Functional Gain - TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27660656 chr1:27660657 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26065 0 0 1 2 1 Ribosome 0.438321293545833 0.438421114927105 0.12062872 0 hPsi_site_19789 iPseU_CNN:0.12062872;iRNA_PseU:0 19790 chr16 86588954 86588954 1 + G A rs73272425 86588953 + 86588933 86588973 41 GCGCCGGGGACAGTCAGGGATGCTCCCAGGCCCTTCGCTCT GCGCCGGGGACAGTCAGGGATACTCCCAGGCCCTTCGCTCT < 41bp 0.542330140047308 0.875443676858511 0.5340433 0.91250676 prediction 0.666227073622408 Functional Gain - FLJ30679 ENSG00000103248 upstream Human protein_coding chr16:86588953 chr16:86588954 . . 0 22 hPsi_associated_SNPs_26066 0 0 1 0 0 unknown 0.438718573575946 0.438681111697637 0.75692692 0 hPsi_site_19790 iPseU_CNN:0.75692692;iRNA_PseU:0 19791 chr8 28908583 28908583 1 + G A SARC 28908582 + 28908562 28908602 41 CAAGACCCCATCTCATTAGCTGTGGAAATGGCAGCAGTCAA CAAGACCCCATCTCATTAGCTATGGAAATGGCAGCAGTCAA < 41bp 0.443499216175778 0.833109421689765 0.30541033 0.41405988 prediction 0.66621884337953 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28908582 chr8:28908583 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26067 0 0 1 1 1 Nucleus 0.438718597286763 0.438718593001975 0 0 hPsi_site_19791 iPseU_CNN:0;iRNA_PseU:0 19792 chr17 19320443 19320443 1 + G A rs149383576 19320442 + 19320422 19320462 41 GGCCCCCTGGGAACTGGGGGTGCGGGAGTTCTCCCTCTGGG GGCCCCCTGGGAACTGGGGGTACGGGAGTTCTCCCTCTGGG < 41bp 0.518433065342269 0.851540928971583 0.3257904 0.8366092 prediction 0.666215727258627 Functional Gain - RNF112 ENSG00000128482 UTR3 Human protein_coding chr17:19320442 chr17:19320443 . . 0 22 hPsi_associated_SNPs_26068 0 0 0 0 0 exosome 0.438746426455587 0.438715982265027 0.6732184 0 hPsi_site_19792 iPseU_CNN:0.6732184;iRNA_PseU:0 19793 chr5 134223674 134223674 1 + C A HNSC 134223673 + 134223653 134223693 41 CAACGTCCGAGAGAGCCTTTTCTCTCTGGATGGCGCTGGAG CAACGTCCGAGAGAGCCTTTTATCTCTGGATGGCGCTGGAG < 41bp 0.468849024821655 0.833101250204744 0.4116783 0.6080285 prediction 0.666202500409488 Functional Gain - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134223673 chr5:134223674 nonsynonymous SNV 0.095 0 22 hPsi_associated_SNPs_26069 0 0 1 0 0 Ribosome 0.438718592980277 0.438718583539941 0.216057 0 hPsi_site_19793 iPseU_CNN:0.216057;iRNA_PseU:0 19794 chr20 34085655 34085655 1 + G A UCEC 34085654 + 34085634 34085674 41 TCATATCACGGAGCAGCAGCTGCGAGCCTCCTTGTGGGCCC TCATATCACGGAGCAGCAGCTACGAGCCTCCTTGTGGGCCC < 41bp 0.563487470694609 0.896577552242167 0.43932 0.80711687 prediction 0.666180163095116 Functional Gain - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34085654 chr20:34085655 synonymous SNV . 0 22 hPsi_associated_SNPs_26070 0 0 1 0 0 Cytosol 0.438719843860901 0.438719993353603 0.61423374 0 hPsi_site_19794 iPseU_CNN:0.61423374;iRNA_PseU:0 19795 chr1 111777549 111777549 1 + C A COAD 111777548 + 111777528 111777568 41 GGTTCCACCCTATGGTGGATTCTTCTACATCACGCTTGGAA GGTTCCACCCTATGGTGGATTATTCTACATCACGCTTGGAA < 41bp 0.518975624180973 0.852054723275196 0.19270194 0.32662714 prediction 0.666158198188447 Functional Gain - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111777548 chr1:111777549 nonsynonymous SNV 0.342 3 22 hPsi_associated_SNPs_26071 0 0 0 0 1 exosome 0.438718592865306 0.438718595897877 0 0 hPsi_site_19795 iPseU_CNN:0;iRNA_PseU:0 19796 chr6 161139344 161139344 1 + C A ACC 161139343 + 161139323 161139363 41 AAGCAACACCTCCACCATCTTCTGGTCCCACCTACCAGTGT AAGCAACACCTCCACCATCTTATGGTCCCACCTACCAGTGT < 41bp 0.473724653007544 0.833068738619846 0.28513727 0.45898345 prediction 0.666137477239692 Functional Gain - PLG ENSG00000122194 CDS Human protein_coding chr6:161139343 chr6:161139344 nonsynonymous SNV 0.045 1 22 hPsi_associated_SNPs_26072 0 0 1 0 1 exosome 0.439160370133517 0.438718565003387 0 0 hPsi_site_19796 iPseU_CNN:0;iRNA_PseU:0 19797 chr7 142749792 142749792 1 + G A SKCM 142749791 + 142749771 142749811 41 ATCCTGACAGACATGGCCCTTGATCGCTTTGTGGCCATCTG ATCCTGACAGACATGGCCCTTAATCGCTTTGTGGCCATCTG < 41bp 0.554174173028047 0.887242787905679 0.18510148 0.22976303 prediction 0.666137229755264 Functional Gain - OR6V1 ENSG00000225781 CDS Human protein_coding chr7:142749791 chr7:142749792 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26073 0 0 0 0 0 unknown 0.438570463415719 0.438737374631413 0 0 hPsi_site_19797 iPseU_CNN:0;iRNA_PseU:0 19798 chrX 79286333 79286333 1 + C A LUSC 79286332 + 79286312 79286352 41 AAAGCGGTTCATCTGAAGACTCCAGTGATCAGTATCTACAA AAAGCGGTTCATCTGAAGACTACAGTGATCAGTATCTACAA < 41bp 0.515944439936937 0.849012070914823 0.14592743 0.24375251 prediction 0.666135261955773 Functional Gain - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79286332 chrX:79286333 nonsynonymous SNV 0.051 0 22 hPsi_associated_SNPs_26074 0 0 0 0 0 unknown 0.438740491798052 0.437661914214156 0 0 hPsi_site_19798 iPseU_CNN:0;iRNA_PseU:0 19799 chr1 12049375 12049375 1 + C A rs78841746 12049374 + 12049354 12049394 41 TGAGCAGCTGGGGGCCTACATCCAGGAGAGCGCCACCTTCC TGAGCAGCTGGGGGCCTACATACAGGAGAGCGCCACCTTCC < 41bp 0.531318487317554 0.8643846001152 0.31888652 0.6691341 prediction 0.666132225595293 Functional Gain - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12049374 chr1:12049375 synonymous SNV . 0 22 hPsi_associated_SNPs_26075 3 0 1 0 1 Ribosome 0.438718593334278 0.438718594421588 0.3382682 0 hPsi_site_19799 iPseU_CNN:0.3382682;iRNA_PseU:0 19800 chr21 39671406 39671406 1 + G A BLCA 39671405 + 39671385 39671425 41 ACCCTGTTCGCTGCCACTTTTGTGATGACCTGGTTCCTTTT ACCCTGTTCGCTGCCACTTTTATGATGACCTGGTTCCTTTT < 41bp 0.438386136063532 0.833058386716199 0.5685836 0.55038315 prediction 0.666116773432399 Functional Gain - KCNJ15 ENSG00000157551 CDS Human protein_coding chr21:39671405 chr21:39671406 nonsynonymous SNV 0.972 3 22 hPsi_associated_SNPs_26076 0 0 0 0 0 exosome 0.438718594552343 0.438718592948812 0 0 hPsi_site_19800 iPseU_CNN:0;iRNA_PseU:0 19801 chr5 140559505 140559505 1 + G A LUAD 140559504 + 140559484 140559524 41 CGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGG CGAGGTGCGCACCGCCAGGCTACTGAGCGAGCGCGACGCGG < 41bp 0.441220024784569 0.833057015227359 0.25352556 0.70916486 prediction 0.666114030454718 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140559504 chr5:140559505 synonymous SNV . 0 22 hPsi_associated_SNPs_26077 0 0 0 0 0 exosome 0.438660928007025 0.436304545704953 0.41832972 0 hPsi_site_19801 iPseU_CNN:0.41832972;iRNA_PseU:0 19802 chr16 31473940 31473940 1 + G A LUAD 31473939 + 31473919 31473959 41 GCTGTGTGCCTCCTATGTCGTGAGGCCATCAACCGGGCCCG GCTGTGTGCCTCCTATGTCGTAAGGCCATCAACCGGGCCCG < 41bp 0.566432988588297 0.899476506771541 0.28669962 0.38615054 prediction 0.666087036366489 Functional Gain - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31473939 chr16:31473940 nonsynonymous SNV 0.861 4 22 hPsi_associated_SNPs_26078 0 0 1 0 0 cytosol 0.43948907879344 0.43871792863671 0 0 hPsi_site_19802 iPseU_CNN:0;iRNA_PseU:0 19803 chr19 5651014 5651014 1 + C A UCEC 5651013 + 5650993 5651033 41 CAGCAGTTGTGGTAGAAATTTCTGGGTTAGTGGACTCTCTT CAGCAGTTGTGGTAGAAATTTATGGGTTAGTGGACTCTCTT < 41bp 0.525411501500427 0.858447449180961 0.29625356 0.36682168 prediction 0.666071895361066 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5651013 chr19:5651014 nonsynonymous SNV 0.984 1 22 hPsi_associated_SNPs_26079 0 0 1 0 2 chromatin 0.438718772609787 0.438718603545225 0 0 hPsi_site_19803 iPseU_CNN:0;iRNA_PseU:0 19804 chr1 114455801 114455801 1 + C A rs41283518 114455800 + 114455780 114455820 41 GGGGTGTGCAGTCTGCCCTGTCCTTCTGCTCATAACCTGAC GGGGTGTGCAGTCTGCCCTGTACTTCTGCTCATAACCTGAC < 41bp 0.509879624635262 0.842910817633356 0.28721434 0.8031237 prediction 0.666062385996187 Functional Gain - DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114455800 chr1:114455801 . . 0 22 hPsi_associated_SNPs_26080 0 0 1 1 0 chromatin 0.43871859297875 0.438948990861932 0.6062474 0 hPsi_site_19804 iPseU_CNN:0.6062474;iRNA_PseU:0 19805 chr16 2028633 2028633 1 + G A rs139314434 2028632 + 2028612 2028652 41 TGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCCCCAC TGGCACAACATGAAGCTCCCTATGCCGGCCGCCGCCCCCAC < 41bp 0.556844565178366 0.889867885573288 0.28948593 0.35388276 prediction 0.666046640789843 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2028632 chr16:2028633 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26081 0 0 1 0 1 Nucleus 0.438720933604408 0.43872100996889 0 0 hPsi_site_19805 iPseU_CNN:0;iRNA_PseU:0 19806 chr16 3088414 3088414 1 + C A rs527461513 3088413 + 3088393 3088433 41 GTAAGCGTTTAACAACAGGCTCCCCGGCTAAAACAATAGCC GTAAGCGTTTAACAACAGGCTACCCGGCTAAAACAATAGCC < 41bp 0.489973571389253 0.833022027788055 0.21822128 0.65036243 prediction 0.666044055576111 Functional Gain - LOC100128770 ENSG00000205890 ncRNA_exonic Human antisense chr16:3088413 chr16:3088414 . . 0 22 hPsi_associated_SNPs_26082 0 0 0 0 0 unknown 0.438718454141197 0.438723792809638 0.30072486 0 hPsi_site_19806 iPseU_CNN:0.30072486;iRNA_PseU:0 19807 chr19 15220154 15220154 1 + G A THCA 15220153 + 15220133 15220173 41 GACCCCAGACCTCCAGCACCTGAGCCCCCGGGGCCACAGCC GACCCCAGACCTCCAGCACCTAAGCCCCCGGGGCCACAGCC < 41bp 0.547280093717918 0.880297454118502 0.29864708 0.50246024 prediction 0.666034720801168 Functional Gain - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15220153 chr19:15220154 nonsynonymous SNV 0.269 1 22 hPsi_associated_SNPs_26083 0 0 1 0 2 exosome 0.43871741353645 0.438718592995105 0.00492048 0 hPsi_site_19807 iPseU_CNN:0.00492048;iRNA_PseU:0 19808 chr1 151062957 151062957 1 + G A rs11204774 151062956 + 151062936 151062976 41 GAAGTACTCCTTCGAGCAGGTGTTAGCAGGGATGCCCGGAC GAAGTACTCCTTCGAGCAGGTATTAGCAGGGATGCCCGGAC < 41bp 0.567818086195587 0.900831292757024 0.1807276 0.7414988 prediction 0.666026413122875 Functional Gain - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151062956 chr1:151062957 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26084 0 1 1 0 2 chromatin 0.43871859379139 0.438718599416683 0.4829976 0 hPsi_site_19808 iPseU_CNN:0.4829976;iRNA_PseU:0 19809 chr6 17283081 17283081 1 + C A LUAD 17283080 + 17283060 17283100 41 GCCGAAAGGGCCTGCAAGGATCCCAATCCCATCATTGATGG GCCGAAAGGGCCTGCAAGGATACCAATCCCATCATTGATGG < 41bp 0.53222505370655 0.865237929715497 0.22073853 0.27015084 prediction 0.666025752017894 Functional Gain - RBM24 ENSG00000112183 CDS Human protein_coding chr6:17283080 chr6:17283081 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_26085 0 0 0 0 2 cytosol 0.438719202489103 0.438722232083259 0 0 hPsi_site_19809 iPseU_CNN:0;iRNA_PseU:0 19810 chr2 112922651 112922651 1 + C A SKCM 112922650 + 112922630 112922670 41 GTACTTAGTGGATCACGAAGTCCATTTTACCTGCAACCCTG GTACTTAGTGGATCACGAAGTACATTTTACCTGCAACCCTG < 41bp 0.531866591896897 0.86487893426228 0.2796319 0.6520804 prediction 0.666024684730766 Functional Gain - FBLN7 ENSG00000144152 CDS Human protein_coding chr2:112922650 chr2:112922651 synonymous SNV . 0 22 hPsi_associated_SNPs_26086 0 0 0 0 2 exosome 0.438709146654386 0.438710732177009 0.3041608 0 hPsi_site_19810 iPseU_CNN:0.3041608;iRNA_PseU:0 19811 chr22 50278552 50278552 1 + C A LGG 50278551 + 50278531 50278571 41 GATGGAAGACGTGGCGGCCTTCTCATCTTCCGATGACATAG GATGGAAGACGTGGCGGCCTTATCATCTTCCGATGACATAG < 41bp 0.519420829467524 0.852430526884342 0.25178915 0.31245112 prediction 0.666019394833636 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278551 chr22:50278552 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_26087 0 0 1 0 0 chromatin 0.439240059841325 0.438717386848359 0 0 hPsi_site_19811 iPseU_CNN:0;iRNA_PseU:0 19812 chr9 138011880 138011880 1 + C A rs199895479 138011879 + 138011859 138011899 41 TGCCTCCACCTATGAATACATCGACATCCCATTCCAGAACA TGCCTCCACCTATGAATACATAGACATCCCATTCCAGAACA < 41bp 0.48224257858999 0.833009103295283 0.14336321 0.3109305 prediction 0.666018206590566 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011879 chr9:138011880 synonymous SNV . 0 22 hPsi_associated_SNPs_26088 0 0 1 0 0 Endoplasmic reticulum 0.438718593022556 0.438719848458714 0 0 hPsi_site_19812 iPseU_CNN:0;iRNA_PseU:0 19813 chr18 54814967 54814967 1 + G A SKCM 54814966 + 54814946 54814986 41 CAAATAGAACAAATAATTCATGAATTCCTGGTGGCCCAGAA CAAATAGAACAAATAATTCATAAATTCCTGGTGGCCCAGAA < 41bp 0.546972764918097 0.879977302986742 0.27560002 0.36234334 prediction 0.66600907613729 Functional Gain - BOD1L2 ENSG00000228075 CDS Human protein_coding chr18:54814966 chr18:54814967 nonsynonymous SNV 0.553 1 22 hPsi_associated_SNPs_26089 0 0 0 0 0 Cytosol 0.438718586868651 0.438718609892347 0 0 hPsi_site_19813 iPseU_CNN:0;iRNA_PseU:0 19814 chr1 197890513 197890513 1 + G A LUAD 197890512 + 197890492 197890532 41 GTCATGCGCGCCCGAGACTCTGTCTACCACCTGAGCTGCTT GTCATGCGCGCCCGAGACTCTATCTACCACCTGAGCTGCTT < 41bp 0.4168088345552 0.833002631946298 0.23059228 0.47396678 prediction 0.666005263892596 Functional Gain - LHX9 ENSG00000143355 CDS Human protein_coding chr1:197890512 chr1:197890513 nonsynonymous SNV 0.987 2 22 hPsi_associated_SNPs_26090 0 0 0 0 1 exosome 0.439175319135325 0.438792603887717 0 0 hPsi_site_19814 iPseU_CNN:0;iRNA_PseU:0 19815 chr17 61558498 61558498 1 + G A LUSC 61558497 + 61558477 61558517 41 AAACATCTACGACATGGTGGTGCCTTTCCCAGACAAGCCCA AAACATCTACGACATGGTGGTACCTTTCCCAGACAAGCCCA < 41bp 0.566623240350008 0.899615220156806 0.29748684 0.7390725 prediction 0.665983959613595 Functional Gain - ACE ENSG00000159640 CDS Human protein_coding chr17:61558497 chr17:61558498 synonymous SNV . 0 22 hPsi_associated_SNPs_26091 0 0 0 0 2 cytosol 0.438703161305069 0.43815020295938 0.478145 0 hPsi_site_19815 iPseU_CNN:0.478145;iRNA_PseU:0 19816 chr14 24842434 24842434 1 + G A CESC 24842433 + 24842413 24842453 41 ATGTTCATCGGCACTGCAGATGAAAGGAACCTGCGGCCTCA ATGTTCATCGGCACTGCAGATAAAAGGAACCTGCGGCCTCA < 41bp 0.52712213134579 0.860113736478387 0.2784416 0.39849317 prediction 0.665983210265193 Functional Gain - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24842433 chr14:24842434 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26092 0 0 0 0 1 cytosol 0.443268182763033 0.438756254875043 0 0 hPsi_site_19816 iPseU_CNN:0;iRNA_PseU:0 19817 chr17 72349661 72349661 1 + G A SKCM 72349660 + 72349640 72349680 41 CTCAGGACAGCCTGGGCAGCTGGATCAACTCTTCCCCTGAC CTCAGGACAGCCTGGGCAGCTAGATCAACTCTTCCCCTGAC < 41bp 0.412299955120837 0.832990955640199 0.28829378 0.38786417 prediction 0.665981911280399 Functional Gain - KIF19 ENSG00000196169 CDS Human protein_coding chr17:72349660 chr17:72349661 stopgain 0.973 0 22 hPsi_associated_SNPs_26093 0 0 0 0 2 exosome 0.438718361105384 0.438726430733709 0 0 hPsi_site_19817 iPseU_CNN:0;iRNA_PseU:0 19818 chr17 47115560 47115560 1 + G A SKCM 47115559 + 47115539 47115579 41 GAAGCTGAATGGCCACCAGTTGGAGAACCATGCCCTGAAGG GAAGCTGAATGGCCACCAGTTAGAGAACCATGCCCTGAAGG < 41bp 0.418527069733272 0.832981624576302 0.6257136 0.84643847 prediction 0.665963249152604 Functional Gain - IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115559 chr17:47115560 synonymous SNV . 0 22 hPsi_associated_SNPs_26094 0 0 1 0 1 Ribosome 0.438718546305833 0.438718592994717 0.44144974 0 hPsi_site_19818 iPseU_CNN:0.44144974;iRNA_PseU:0 19819 chr16 66431962 66431962 1 + G A UCEC 66431961 + 66431941 66431981 41 AATGACAATGCCCCGGAGTTTGCCAAGCCCTACCAGCCCAA AATGACAATGCCCCGGAGTTTACCAAGCCCTACCAGCCCAA < 41bp 0.572559073950317 0.905538289544781 0.43510318 0.7099601 prediction 0.665958431188927 Functional Gain - CDH5 ENSG00000179776 CDS Human protein_coding chr16:66431961 chr16:66431962 nonsynonymous SNV 0.903 1 22 hPsi_associated_SNPs_26095 0 0 0 0 2 Cytosol 0.438719819473587 0.438720871565118 0.4199202 0 hPsi_site_19819 iPseU_CNN:0.4199202;iRNA_PseU:0 19820 chr22 39112893 39112893 1 + G A BLCA 39112892 + 39112872 39112912 41 GCCTGGAGTGGACCAAGATCTGTGAGAAGTCCACGAAAGTC GCCTGGAGTGGACCAAGATCTATGAGAAGTCCACGAAAGTC < 41bp 0.420512770522039 0.832978119240832 0.500253 0.6312772 prediction 0.665956238481664 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39112892 chr22:39112893 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_26096 0 0 0 0 0 Ribosome 0.438718695902465 0.438718632076834 0.2620484 0 hPsi_site_19820 iPseU_CNN:0.2620484;iRNA_PseU:0 19821 chr17 27225737 27225737 1 + G A SKCM 27225736 + 27225716 27225756 41 CTGGAGGCACCTCTTCCACATGGCAGTTGGCAAAATATCTC CTGGAGGCACCTCTTCCACATAGCAGTTGGCAAAATATCTC < 41bp 0.543723307930828 0.87670124799133 0.16403401 0.22250062 prediction 0.665955880121004 Functional Gain - DHRS13 ENSG00000167536 CDS Human protein_coding chr17:27225736 chr17:27225737 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_26097 0 0 0 0 0 Ribosome 0.438718288341293 0.438615873572337 0 0 hPsi_site_19821 iPseU_CNN:0;iRNA_PseU:0 19822 chr7 142499830 142499830 1 + G A SKCM 142499829 + 142499809 142499849 41 CTGTCTGCCACCATCCTCTATGAGATCTTGCTAGGGAAGGC CTGTCTGCCACCATCCTCTATAAGATCTTGCTAGGGAAGGC < 41bp 0.458104423827589 0.83297775008224 0.28844923 0.296834 prediction 0.66595550016448 Functional Gain - PRSS3P2;EPHB6 ENSG00000211772 CDS Human TR_C_gene chr7:142499829 chr7:142499830 unknown . 0 22 hPsi_associated_SNPs_26098 0 0 0 0 1 unknown 0.438718592823258 0.43871858929203 0 0 hPsi_site_19822 iPseU_CNN:0;iRNA_PseU:0 19823 chr11 4616015 4616015 1 + G A BLCA 4616014 + 4615994 4616034 41 AAGCACATGTGGCTCCCATGTGGGGGTTATGGCTTTGTACT AAGCACATGTGGCTCCCATGTAGGGGTTATGGCTTTGTACT < 41bp 0.445274284957116 0.832973747052357 0.24802351 0.6197494 prediction 0.665947494104715 Functional Gain - OR52I1 ENSG00000232268 CDS Human protein_coding chr11:4616014 chr11:4616015 synonymous SNV . 0 22 hPsi_associated_SNPs_26099 0 0 0 0 0 unknown 0.43864169459159 0.438683731444412 0.2394988 0 hPsi_site_19823 iPseU_CNN:0.2394988;iRNA_PseU:0 19824 chr21 34634998 34634998 1 + G A ESCA 34634997 + 34634977 34635017 41 AGTAGCTGGGATTACAAGCGTGCATCCCTGTGCCCCAGTGA AGTAGCTGGGATTACAAGCGTACATCCCTGTGCCCCAGTGA < 41bp 0.546759028766305 0.879731167212483 0.35023367 0.47913846 prediction 0.665944276892355 Functional Gain - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34634997 chr21:34634998 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_26100 0 0 1 0 0 Ribosome 0.438718593737354 0.43872489259431 0 0 hPsi_site_19824 iPseU_CNN:0;iRNA_PseU:0 19825 chr17 15619643 15619643 1 + C A UCEC 15619642 + 15619622 15619662 41 GGAAAAGCTTCAATCAGAAATCTGTCCTTATCACTGAAGAC GGAAAAGCTTCAATCAGAAATATGTCCTTATCACTGAAGAC < 41bp 0.497996996233206 0.832971647354476 0.37325582 0.53171986 prediction 0.665943294708952 Functional Gain - ZNF286A ENSG00000187607;ENSG00000255104 CDS Human other chr17:15619642 chr17:15619643 nonsynonymous SNV 0.177 1 22 hPsi_associated_SNPs_26101 0 0 0 0 0 Nucleus 0.438716144379714 0.438684512788279 0.0634397200000001 0 hPsi_site_19825 iPseU_CNN:0.0634397200000001;iRNA_PseU:0 19826 chr19 15852868 15852868 1 + C A OV 15852867 + 15852847 15852887 41 CATCATCCTCTCCTTTGTCTTCATTGTGGCTGCCATCTTGA CATCATCCTCTCCTTTGTCTTAATTGTGGCTGCCATCTTGA < 41bp 0.495445014921988 0.832964638003471 0.1917094 0.2851848 prediction 0.665929276006941 Functional Gain - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852867 chr19:15852868 nonsynonymous SNV 0.909 0 22 hPsi_associated_SNPs_26102 0 0 0 0 0 unknown 0.437419387976044 0.438886338774609 0 0 hPsi_site_19826 iPseU_CNN:0;iRNA_PseU:0 19827 chr17 21318657 21318657 1 + G A SKCM 21318656 + 21318636 21318676 41 GGGTCCCCCAACCCCCGGGATGACCGCGGCCAGCCGGGCCA GGGTCCCCCAACCCCCGGGATAACCGCGGCCAGCCGGGCCA < 41bp 0.549298838001878 0.882261889208559 0.28106338 0.47284153 prediction 0.665926102413362 Functional Gain - KCNJ12;KCNJ18 ENSG00000184185 CDS Human protein_coding chr17:21318656 chr17:21318657 nonsynonymous SNV 0.847 2 22 hPsi_associated_SNPs_26103 0 0 0 0 1 unknown 0.438518629426456 0.438722663775474 0 0 hPsi_site_19827 iPseU_CNN:0;iRNA_PseU:0 19828 chr22 29490392 29490392 1 + G A LUSC 29490391 + 29490371 29490411 41 AACGGGGAGGGGGGCCTGGGTGAGCACAACTATTGCAGGTA AACGGGGAGGGGGGCCTGGGTAAGCACAACTATTGCAGGTA < 41bp 0.421406771323366 0.832960885802206 0.31324273 0.6684817 prediction 0.665921771604412 Functional Gain - KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29490391 chr22:29490392 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_26104 0 0 1 0 1 Endoplasmic reticulum 0.438718585464632 0.438718524592176 0.3369634 0 hPsi_site_19828 iPseU_CNN:0.3369634;iRNA_PseU:0 19829 chr19 18729197 18729197 1 + G A COAD 18729196 + 18729176 18729216 41 GCGGGGCAGGCGCTCGGGTCTGCCTCGCTGGATCCTGGCCT GCGGGGCAGGCGCTCGGGTCTACCTCGCTGGATCCTGGCCT < 41bp 0.563848302749935 0.896807916959896 0.30739468 0.47776818 prediction 0.665919228419922 Functional Gain - TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18729196 chr19:18729197 synonymous SNV . 0 22 hPsi_associated_SNPs_26105 0 0 1 0 1 Cytosol 0.43871859347499 0.438718592984881 0 0 hPsi_site_19829 iPseU_CNN:0;iRNA_PseU:0 19830 chr1 155699029 155699029 1 + G A UCEC 155699028 + 155699008 155699048 41 CGGGTGAGGAACGCCACAGATGCAGTTGGAATTGTGCTGAA CGGGTGAGGAACGCCACAGATACAGTTGGAATTGTGCTGAA < 41bp 0.569876634217685 0.902831564742401 0.53060204 0.6752626 prediction 0.665909861049432 Functional Gain - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155699028 chr1:155699029 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_26106 0 0 1 0 1 chromatin 0.43871802047671 0.438721873741029 0.28932112 0 hPsi_site_19830 iPseU_CNN:0.28932112;iRNA_PseU:0 19831 chr7 143701311 143701311 1 + C A LUAD 143701310 + 143701290 143701330 41 CTTCTTGGAGACCTGGTACATCTCTGTGACTGTGCCCAAGT CTTCTTGGAGACCTGGTACATATCTGTGACTGTGCCCAAGT < 41bp 0.503024213952453 0.835970774042551 0.25583667 0.34561288 prediction 0.665893120180195 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701310 chr7:143701311 synonymous SNV . 0 22 hPsi_associated_SNPs_26107 0 0 0 0 0 unknown 0.438718592995609 0.438718592994755 0 0 hPsi_site_19831 iPseU_CNN:0;iRNA_PseU:0 19832 chrX 19373563 19373563 1 + G A BLCA 19373562 + 19373542 19373582 41 TATGGAATGGGAACGTCTGTTGAGAGAGCGGCAGCCAGCAC TATGGAATGGGAACGTCTGTTAAGAGAGCGGCAGCCAGCAC < 41bp 0.56297718191419 0.895923477237174 0.42482853 0.6389266 prediction 0.665892590645967 Functional Gain - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373562 chrX:19373563 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26108 0 0 1 0 1 Ribosome 0.438342925846432 0.438715967671656 0.2778532 0 hPsi_site_19832 iPseU_CNN:0.2778532;iRNA_PseU:0 19833 chr5 140573637 140573637 1 + C A COAD 140573636 + 140573616 140573656 41 CCTGCCCCTCGCCTCCCTGGTCTCCATCAACGCGGACAACG CCTGCCCCTCGCCTCCCTGGTATCCATCAACGCGGACAACG < 41bp 0.478743774238532 0.832945099532339 0.343741 0.76637447 prediction 0.665890199064678 Functional Gain - PCDHB10 ENSG00000120324 CDS Human protein_coding chr5:140573636 chr5:140573637 synonymous SNV . 0 22 hPsi_associated_SNPs_26109 0 0 0 0 0 exosome 0.438718748496856 0.438713143857791 0.53274894 0 hPsi_site_19833 iPseU_CNN:0.53274894;iRNA_PseU:0 19834 chr11 73627688 73627688 1 + G A BLCA 73627687 + 73627667 73627707 41 AGATGGAAACATTTATCAGCTGGATGTGAGGAGTCCAAGGT AGATGGAAACATTTATCAGCTAGATGTGAGGAGTCCAAGGT < 41bp 0.565333169683274 0.898274605396881 0.27055848 0.35248387 prediction 0.665882871427215 Functional Gain - PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73627687 chr11:73627688 synonymous SNV . 0 22 hPsi_associated_SNPs_26110 0 0 1 0 2 Ribosome 0.438721296803647 0.438718591890372 0 0 hPsi_site_19834 iPseU_CNN:0;iRNA_PseU:0 19835 chr6 150464589 150464589 1 + G A GBM 150464588 + 150464568 150464608 41 GCTTCGGAAGCGGCTGGTGCTGGAGGAATGGATCGTGGAGC GCTTCGGAAGCGGCTGGTGCTAGAGGAATGGATCGTGGAGC < 41bp 0.440140745244377 0.832941042245648 0.102648765 0.20228878 prediction 0.665882084491296 Functional Gain - PPP1R14C ENSG00000198729 CDS Human protein_coding chr6:150464588 chr6:150464589 synonymous SNV . 0 22 hPsi_associated_SNPs_26111 0 0 1 0 1 Ribosome 0.438707743841672 0.438718201435348 0 0 hPsi_site_19835 iPseU_CNN:0;iRNA_PseU:0 19836 chr8 67047378 67047378 1 + C A BLCA 67047377 + 67047357 67047397 41 GGCTCCCCTCACTCATGTGTTCCAGAGACAGAAGGTAACAG GGCTCCCCTCACTCATGTGTTACAGAGACAGAAGGTAACAG < 41bp 0.466580353344053 0.832938503472106 0.298428 0.42497402 prediction 0.665877006944213 Functional Gain - TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67047377 chr8:67047378 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26112 0 0 0 0 1 exosome 0.438718592995065 0.438719093370437 0 0 hPsi_site_19836 iPseU_CNN:0;iRNA_PseU:0 19837 chr5 140594745 140594745 1 + G A BLCA 140594744 + 140594724 140594764 41 CCATGCCCCAGAAGTTACCATGTCTGCATTTACCAGCCCAA CCATGCCCCAGAAGTTACCATATCTGCATTTACCAGCCCAA < 41bp 0.451236709524584 0.832937756153627 0.29035908 0.37248534 prediction 0.665875512307254 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140594744 chr5:140594745 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_26113 0 0 0 0 0 exosome 0.438718506417257 0.438718558848117 0 0 hPsi_site_19837 iPseU_CNN:0;iRNA_PseU:0 19838 chr14 35483999 35483999 1 + G A COAD 35483998 + 35483978 35484018 41 TAAAGTCAACGAGTTGAAGTTGGATGACAATGAAGCACTTA TAAAGTCAACGAGTTGAAGTTAGATGACAATGAAGCACTTA < 41bp 0.56296722942696 0.895902549039282 0.37218904 0.74164194 prediction 0.665870639224644 Functional Gain - SRP54 ENSG00000100883 CDS Human protein_coding chr14:35483998 chr14:35483999 synonymous SNV . 0 22 hPsi_associated_SNPs_26114 0 0 1 0 2 Ribosome 0.438471656067705 0.43873691878525 0.48328388 0 hPsi_site_19838 iPseU_CNN:0.48328388;iRNA_PseU:0 19839 chr12 68052220 68052220 1 + C A READ 68052219 + 68052199 68052239 41 TGATCCCCTTTTCCTTGACTTCTTAAAACAGTGTTTAGAGT TGATCCCCTTTTCCTTGACTTATTAAAACAGTGTTTAGAGT < 41bp 0.522643246487555 0.855572132832007 0.24008793 0.23470652 prediction 0.665857772688903 Functional Gain - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68052219 chr12:68052220 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26115 0 0 1 0 0 Ribosome 0.438718587656165 0.438717875758349 0 0 hPsi_site_19839 iPseU_CNN:0;iRNA_PseU:0 19840 chr16 23581858 23581858 1 + C A UCEC 23581857 + 23581837 23581877 41 TGGGTGTACTGGGTTCCAACTCAATATGTGGATGCAATCAA TGGGTGTACTGGGTTCCAACTAAATATGTGGATGCAATCAA < 41bp 0.499479632982222 0.83291693224495 0.19899148 0.22270364 prediction 0.665833864489899 Functional Gain - UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23581857 chr16:23581858 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26116 0 0 1 0 1 Ribosome 0.4387194563665 0.438718572549837 0 0 hPsi_site_19840 iPseU_CNN:0;iRNA_PseU:0 19841 chrX 148798016 148798016 1 + C A UCEC 148798015 + 148797995 148798035 41 CCCCACTAGCCACTCCTATGTCCTTGTCACCTCCCTCAACC CCCCACTAGCCACTCCTATGTACTTGTCACCTCCCTCAACC < 41bp 0.531439182287318 0.864354558205696 0.27181908 0.94590336 prediction 0.665830751836756 Functional Gain - MAGEA11 ENSG00000185247 CDS Human protein_coding chrX:148798015 chrX:148798016 synonymous SNV . 0 22 hPsi_associated_SNPs_26117 0 0 0 0 0 exosome 0.438718593585908 0.438718597004164 0.89180672 0 hPsi_site_19841 iPseU_CNN:0.89180672;iRNA_PseU:0 19842 chr1 20517156 20517156 1 + G A CESC 20517155 + 20517135 20517175 41 GCAGCCAAACTCACTAAATATGCACATGATAAGGCCCAAGT GCAGCCAAACTCACTAAATATACACATGATAAGGCCCAAGT < 41bp 0.435188382990547 0.832910744786716 0.32751217 0.746259 prediction 0.665821489573432 Functional Gain - UBXN10 ENSG00000162543 CDS Human protein_coding chr1:20517155 chr1:20517156 nonsynonymous SNV 0.157 4 22 hPsi_associated_SNPs_26118 0 0 0 0 0 Cytosol 0.438702961544807 0.438718611106992 0.492518 0 hPsi_site_19842 iPseU_CNN:0.492518;iRNA_PseU:0 19843 chr19 10943830 10943830 1 + C T COAD 10943831 - 10943811 10943851 41 CATCCAGATGCTCACGCTACTGCGGGCCTTCGAGGCACGTG CATCCAGATGCTCACGCTACTACGGGCCTTCGAGGCACGTG < 41bp 0.558256086508802 0.891165150537283 0.29125357 0.41260797 prediction 0.665818128056961 Functional Gain - TMED1 ENSG00000079805;ENSG00000099203 CDS Human other chr19:10943831 chr19:10943830 nonsynonymous SNV 0.773 0 22 hPsi_associated_SNPs_26119 0 0 1 0 1 Ribosome 0.437670558530313 0.438606885793606 0 0 hPsi_site_19843 iPseU_CNN:0;iRNA_PseU:0 19844 chr10 99968035 99968035 1 + C A UCEC 99968034 + 99968014 99968054 41 AAGAAAAGCAAAAAGAAAGTTCTCTCTCCCAAAAAGAAGTC AAGAAAAGCAAAAAGAAAGTTATCTCTCCCAAAAAGAAGTC < 41bp 0.489400060814867 0.832908767956027 0.31547529 0.369319 prediction 0.665817535912054 Functional Gain - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99968034 chr10:99968035 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_26120 0 0 0 0 0 Nucleus 0.438718589246102 0.438718591180564 0 0 hPsi_site_19844 iPseU_CNN:0;iRNA_PseU:0 19845 chr8 144803953 144803953 1 + C A CESC 144803952 + 144803932 144803972 41 GCGGGAGGGGAGCTGCGCCCTCCCTGACCTCCCAGGCTGCG GCGGGAGGGGAGCTGCGCCCTACCTGACCTCCCAGGCTGCG < 41bp 0.531820303780914 0.864725097420903 0.2466451 0.7950753 prediction 0.665809587279979 Functional Gain - MAPK15 ENSG00000181085 CDS Human protein_coding chr8:144803952 chr8:144803953 nonsynonymous SNV 0.047 3 22 hPsi_associated_SNPs_26121 0 0 0 0 2 chromatin 0.438718518551214 0.438718597092963 0.5901506 0 hPsi_site_19845 iPseU_CNN:0.5901506;iRNA_PseU:0 19846 chr16 570791 570791 1 + C A rs117823652 570790 + 570770 570810 41 GCAGGACTACATCGACAGGATCATCGTGGCCATCATGGAGA GCAGGACTACATCGACAGGATAATCGTGGCCATCATGGAGA < 41bp 0.507175679474513 0.840075324121412 0.33131915 0.7844254 prediction 0.665799289293799 Functional Gain - RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:570790 chr16:570791 synonymous SNV . 0 22 hPsi_associated_SNPs_26122 0 0 1 0 1 Ribosome 0.4384867637594 0.438863236019944 0.5688508 0 hPsi_site_19846 iPseU_CNN:0.5688508;iRNA_PseU:0 19847 chr16 2752370 2752370 1 + C A BLCA 2752369 + 2752349 2752389 41 TGCAGTTGGTCAGCATCGGCTCCTCTTACAACTATGGGAAC TGCAGTTGGTCAGCATCGGCTACTCTTACAACTATGGGAAC < 41bp 0.524796576216632 0.857694169940142 0.17372811 0.6620657 prediction 0.665795187447021 Functional Gain - KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2752369 chr16:2752370 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_26123 0 0 1 0 1 Ribosome 0.437376691530649 0.438449997803049 0.3241314 0 hPsi_site_19847 iPseU_CNN:0.3241314;iRNA_PseU:0 19848 chr14 23511727 23511727 1 + C A LUSC 23511726 + 23511706 23511746 41 TGGGTACCACCTCTGGCACCTCTGCCGACTGTGCTACCTGG TGGGTACCACCTCTGGCACCTATGCCGACTGTGCTACCTGG < 41bp 0.488420952170642 0.832894837360379 0.33052623 0.9137468 prediction 0.665789674720759 Functional Gain - PSMB11 ENSG00000222028 CDS Human protein_coding chr14:23511726 chr14:23511727 nonsynonymous SNV 0.655 4 22 hPsi_associated_SNPs_26124 0 0 0 0 0 exosome 0.438718591830773 0.438678171639905 0.8274936 0 hPsi_site_19848 iPseU_CNN:0.8274936;iRNA_PseU:0 19849 chrX 57162353 57162353 1 + G A LAML 57162352 + 57162332 57162372 41 TTCCACTTGGTGAATGACCATGCCGATCCTTTTGGAGCCAT TTCCACTTGGTGAATGACCATACCGATCCTTTTGGAGCCAT < 41bp 0.466458397623859 0.832894546108431 0.30953473 0.59652525 prediction 0.665789092216862 Functional Gain - SPIN2A ENSG00000147059 CDS Human protein_coding chrX:57162352 chrX:57162353 synonymous SNV . 0 22 hPsi_associated_SNPs_26125 0 0 0 0 0 exosome 0.438729826172588 0.43871853642472 0.1930505 0 hPsi_site_19849 iPseU_CNN:0.1930505;iRNA_PseU:0 19850 chr3 151599022 151599022 1 + C A UCEC 151599021 + 151599001 151599041 41 GCTCTGCCCCTTGAAAAGCCTCTCAACTTGGTCATCATGGC GCTCTGCCCCTTGAAAAGCCTATCAACTTGGTCATCATGGC < 41bp 0.512085426322213 0.844979449054628 0.36216506 0.5702927 prediction 0.66578804546483 Functional Gain - SUCNR1 ENSG00000198829 CDS Human protein_coding chr3:151599021 chr3:151599022 nonsynonymous SNV 0.558 0 22 hPsi_associated_SNPs_26126 0 0 0 0 0 exosome 0.438718592993376 0.438718592995142 0.1405854 0 hPsi_site_19850 iPseU_CNN:0.1405854;iRNA_PseU:0 19851 chr13 103295669 103295669 1 + C A COAD 103295668 + 103295648 103295688 41 AGCATATCGAAGCCATGAATTCTATAAGTTTTGTTCTCTTC AGCATATCGAAGCCATGAATTATATAAGTTTTGTTCTCTTC < 41bp 0.485010676089312 0.832887112657983 0.26020008 0.39497158 prediction 0.665774225315967 Functional Gain - TPP2 ENSG00000134900 CDS Human protein_coding chr13:103295668 chr13:103295669 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_26127 0 0 0 0 2 Nucleus 0.43871850202577 0.438718403212771 0 0 hPsi_site_19851 iPseU_CNN:0;iRNA_PseU:0 19852 chr7 76109942 76109942 1 + G A UCEC 76109941 + 76109921 76109961 41 ACCCCTACAGTGCCACCGTCTGCAGCTTCATCGAGCAGCAG ACCCCTACAGTGCCACCGTCTACAGCTTCATCGAGCAGCAG < 41bp 0.422971126999986 0.832885569494969 0.34630287 0.5113181 prediction 0.665771138989937 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76109941 chr7:76109942 nonsynonymous SNV 0.668 4 22 hPsi_associated_SNPs_26128 0 0 0 0 0 Nucleus 0.438718604878459 0.438719231083669 0.0226362 0 hPsi_site_19852 iPseU_CNN:0.0226362;iRNA_PseU:0 19853 chr6 43269995 43269995 1 + G A HNSC 43269994 + 43269974 43270014 41 GGATGTGTCGGGGCTGGGGCTGAACGTGTACCAGACACAGC GGATGTGTCGGGGCTGGGGCTAAACGTGTACCAGACACAGC < 41bp 0.405474602373667 0.832879002401771 0.19868028 0.564847 prediction 0.665758004803543 Functional Gain - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43269994 chr6:43269995 synonymous SNV . 0 22 hPsi_associated_SNPs_26129 0 0 0 0 1 cytosol 0.438724750762852 0.438719061432817 0.129694 0 hPsi_site_19853 iPseU_CNN:0.129694;iRNA_PseU:0 19854 chr20 32376702 32376702 1 + C A COAD 32376701 + 32376681 32376721 41 ACAAATGCTCAGTGTGCGAGTCTGCGTTCAACCGCAAGGAC ACAAATGCTCAGTGTGCGAGTATGCGTTCAACCGCAAGGAC < 41bp 0.542827531912129 0.875706407428322 0.20898283 0.7061926 prediction 0.665757751032386 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32376701 chr20:32376702 nonsynonymous SNV 0.820 4 22 hPsi_associated_SNPs_26130 0 0 0 0 2 chromatin 0.438717309543738 0.438725113402718 0.4123852 0 hPsi_site_19854 iPseU_CNN:0.4123852;iRNA_PseU:0 19855 chr6 34952950 34952950 1 + C A UCEC 34952949 + 34952929 34952969 41 CGAAGCTCTGTATAATGCCATCTCCTGCCATTCGTTGGACA CGAAGCTCTGTATAATGCCATATCCTGCCATTCGTTGGACA < 41bp 0.474809715250435 0.832877098267815 0.36816463 0.54627913 prediction 0.665754196535629 Functional Gain - ANKS1A ENSG00000064999 CDS Human protein_coding chr6:34952949 chr6:34952950 synonymous SNV . 0 22 hPsi_associated_SNPs_26131 0 0 1 0 1 Cytosol 0.438717869277473 0.438194041045004 0.0925582599999999 0 hPsi_site_19855 iPseU_CNN:0.0925582599999999;iRNA_PseU:0 19856 chr1 43785180 43785180 1 + C A CESC 43785179 + 43785159 43785199 41 TGAGTCCCTGAACTACAGTGTCTATACCACCAAGAGTGATG TGAGTCCCTGAACTACAGTGTATATACCACCAAGAGTGATG < 41bp 0.522782659480974 0.855651821599894 0.4064173 0.61029154 prediction 0.665738324237839 Functional Gain - TIE1 ENSG00000066056 CDS Human protein_coding chr1:43785179 chr1:43785180 synonymous SNV . 0 22 hPsi_associated_SNPs_26132 0 0 0 0 2 Cytosol 0.438349936719364 0.438734860751004 0.22058308 0 hPsi_site_19856 iPseU_CNN:0.22058308;iRNA_PseU:0 19857 chr3 142522843 142522843 1 + G A LUSC 142522842 + 142522822 142522862 41 CATTGGCACCTGCTTTGCTTTGTTCTGGTATATTTTCTCCT CATTGGCACCTGCTTTGCTTTATTCTGGTATATTTTCTCCT < 41bp 0.431816397825504 0.832865808609148 0.4994051 0.62854016 prediction 0.665731617218296 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142522842 chr3:142522843 synonymous SNV . 0 22 hPsi_associated_SNPs_26133 0 0 1 0 1 Ribosome 0.43880506142077 0.439061007314513 0.25708032 0 hPsi_site_19857 iPseU_CNN:0.25708032;iRNA_PseU:0 19858 chr17 14207454 14207454 1 + G A rs557255429 14207453 + 14207433 14207473 41 CTTGCGCCCGGGGGCTGCGCTGCGAGCGGCCACGCATGGCG CTTGCGCCCGGGGGCTGCGCTACGAGCGGCCACGCATGGCG < 41bp 0.53426080212056 0.867125417255173 0.3034166 0.594519 prediction 0.665729230269226 Functional Gain - MGC12916 ENSG00000266709 ncRNA_exonic Human lincRNA chr17:14207453 chr17:14207454 . . 0 22 hPsi_associated_SNPs_26134 0 0 0 0 0 unknown 0.438707107240686 0.438623543661926 0.189038 0 hPsi_site_19858 iPseU_CNN:0.189038;iRNA_PseU:0 19859 chr2 239037404 239037404 1 + G A rs144328054 239037403 + 239037383 239037423 41 TGGCCTGGCCGCACTACAGCTGGATGGGCTGCCCTCAGGCG TGGCCTGGCCGCACTACAGCTAGATGGGCTGCCCTCAGGCG < 41bp 0.419713892020588 0.832862104221174 0.3212893 0.4337999 prediction 0.665724208442348 Functional Gain - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239037403 chr2:239037404 synonymous SNV . 0 22 hPsi_associated_SNPs_26135 0 0 0 0 1 exosome 0.438718572113017 0.438718592973479 0 0 hPsi_site_19859 iPseU_CNN:0;iRNA_PseU:0 19860 chr7 150767852 150767852 1 + G A STAD 150767851 + 150767831 150767871 41 TCCCGCCCCACCATGGCCTTTGTGCGGCTCCGGGAGGCTGT TCCCGCCCCACCATGGCCTTTATGCGGCTCCGGGAGGCTGT < 41bp 0.41402274543723 0.832861627006286 0.63898736 0.6211307 prediction 0.665723254012571 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150767851 chr7:150767852 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_26136 0 0 1 0 1 Ribosome 0.438718592993129 0.438718592995089 0 0 hPsi_site_19860 iPseU_CNN:0;iRNA_PseU:0 19861 chr17 33592466 33592466 1 + C A UCEC 33592465 + 33592445 33592485 41 CCCTGGGTCCCTGGTGATGCTCTATGAACCTAAATGGGCTC CCCTGGGTCCCTGGTGATGCTATATGAACCTAAATGGGCTC < 41bp 0.485974489394519 0.832861519163082 0.24978825 0.45502087 prediction 0.665723038326163 Functional Gain - SLFN5 ENSG00000166750 CDS Human protein_coding chr17:33592465 chr17:33592466 synonymous SNV . 0 22 hPsi_associated_SNPs_26137 0 0 1 0 0 nucleus 0.438719160935675 0.438952077824213 0 0 hPsi_site_19861 iPseU_CNN:0;iRNA_PseU:0 19862 chr22 45728572 45728572 1 + C A COAD 45728571 + 45728551 45728591 41 GCAAGACCTTGCCACTCAGATCTGCAAACAGCAAAGCCCAG GCAAGACCTTGCCACTCAGATATGCAAACAGCAAAGCCCAG < 41bp 0.467667976086528 0.832854864443253 0.27262473 0.28942013 prediction 0.665709728886506 Functional Gain - FAM118A ENSG00000100376 CDS Human protein_coding chr22:45728571 chr22:45728572 synonymous SNV . 0 22 hPsi_associated_SNPs_26138 0 0 1 0 1 Cytosol 0.438586025015497 0.438713862629358 0 0 hPsi_site_19862 iPseU_CNN:0;iRNA_PseU:0 19863 chr9 100416128 100416128 1 + G A GBM 100416127 + 100416107 100416147 41 CCAGCACCCCCTCACATTGATGTGATGTACACAACACTCCT CCAGCACCCCCTCACATTGATATGATGTACACAACACTCCT < 41bp 0.565640074930407 0.898485534871494 0.1870892 0.20008218 prediction 0.665690919882173 Functional Gain - NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100416127 chr9:100416128 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26139 0 0 1 0 2 Nucleus 0.438794071632119 0.438719736691062 0 0 hPsi_site_19863 iPseU_CNN:0;iRNA_PseU:0 19864 chr6 43181588 43181588 1 + C A UCEC 43181587 + 43181567 43181607 41 AGGAATCTCTTGAGCTGTCTTCTTGTTCGTATTCTCAAAGC AGGAATCTCTTGAGCTGTCTTATTGTTCGTATTCTCAAAGC < 41bp 0.477723941383651 0.832844427073477 0.3122289 0.3757053 prediction 0.665688854146955 Functional Gain - CUL9 ENSG00000112659 CDS Human protein_coding chr6:43181587 chr6:43181588 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26140 0 0 1 0 1 chromatin 0.438936984876205 0.438104703023954 0 0 hPsi_site_19864 iPseU_CNN:0;iRNA_PseU:0 19865 chr11 93800666 93800666 1 + C T UCEC 93800667 - 93800647 93800687 41 GTTTCCGAAGAGGTATCCATTGAGGGCTGGAAACAGAAACA GTTTCCGAAGAGGTATCCATTAAGGGCTGGAAACAGAAACA < 41bp 0.447089270235141 0.832843833231048 0.25970495 0.4512962 prediction 0.665687666462097 Functional Gain - HEPHL1 ENSG00000181333 CDS Human protein_coding chr11:93800667 chr11:93800666 synonymous SNV . 0 22 hPsi_associated_SNPs_26141 0 0 0 0 1 exosome 0.438684047869331 0.438718594515466 0 0 hPsi_site_19865 iPseU_CNN:0;iRNA_PseU:0 19866 chr3 15262445 15262445 1 + G A UCEC 15262444 + 15262424 15262464 41 ATAAGTCCTCAGTCATGTGATGCACAAGGACAGAGATACAC ATAAGTCCTCAGTCATGTGATACACAAGGACAGAGATACAC < 41bp 0.435936060370822 0.83284208350354 0.32942328 0.6361178 prediction 0.66568416700708 Functional Gain - CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15262444 chr3:15262445 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_26142 0 0 1 0 1 Cytosol 0.438748273158353 0.438720068490131 0.2722356 0 hPsi_site_19866 iPseU_CNN:0.2722356;iRNA_PseU:0 19867 chr3 39133154 39133154 1 + C A SKCM 39133153 + 39133133 39133173 41 CAACAAAATTCCTTTCTACCTCCAACCTCATGCATCTTCAG CAACAAAATTCCTTTCTACCTACAACCTCATGCATCTTCAG < 41bp 0.49036807572921 0.83283943024588 0.22446406 0.32583648 prediction 0.665678860491761 Functional Gain - WDR48 ENSG00000114742 CDS Human protein_coding chr3:39133153 chr3:39133154 synonymous SNV . 0 22 hPsi_associated_SNPs_26143 0 0 1 9 2 Ribosome 0.438718592995101 0.438718592982161 0 0 hPsi_site_19867 iPseU_CNN:0;iRNA_PseU:0 19868 chr8 92201820 92201820 1 + C A UCEC 92201819 + 92201799 92201839 41 TCCTGCAGCAGCCAGTGATTTCTACACAGCAGGAGAACGTC TCCTGCAGCAGCCAGTGATTTATACACAGCAGGAGAACGTC < 41bp 0.530056253504981 0.862895164614337 0.47657755 0.44691834 prediction 0.665677822218711 Functional Gain - LRRC69 ENSG00000214954 CDS Human protein_coding chr8:92201819 chr8:92201820 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_26144 0 0 0 0 2 nucleoplasm 0.438842937256097 0.438760656320689 0 0 hPsi_site_19868 iPseU_CNN:0;iRNA_PseU:0 19869 chr4 70160343 70160343 1 + G A rs72552705 70160342 + 70160322 70160362 41 TCTGGATTGAATTTGTGATGTGCCACAAAGGAGCCAAACAC TCTGGATTGAATTTGTGATGTACCACAAAGGAGCCAAACAC < 41bp 0.443396614502318 0.832834309858805 0.33581126 0.65004325 prediction 0.665668619717611 Functional Gain - UGT2B28 ENSG00000135226 CDS Human protein_coding chr4:70160342 chr4:70160343 nonsynonymous SNV 0.257 1 22 hPsi_associated_SNPs_26145 0 0 0 0 1 exosome 0.436844586123596 0.438766779791619 0.3000865 0 hPsi_site_19869 iPseU_CNN:0.3000865;iRNA_PseU:0 19870 chr7 21470206 21470206 1 + C A LUAD 21470205 + 21470185 21470225 41 AGTTGGCAAACTGTACAGGTTCAGAATATTCAGAGTCTTTC AGTTGGCAAACTGTACAGGTTAAGAATATTCAGAGTCTTTC < 41bp 0.492676469900381 0.832831470830999 0.35458362 0.3792475 prediction 0.665662941661997 Functional Gain - SP4 ENSG00000105866 CDS Human protein_coding chr7:21470205 chr7:21470206 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26146 0 0 1 0 0 chromatin 0.442859471413003 0.442956070176473 0 0 hPsi_site_19870 iPseU_CNN:0;iRNA_PseU:0 19871 chr8 66992737 66992737 1 + G A rs7006209 66992736 + 66992716 66992756 41 GCCAGAAGAGGACTTCTATGTGTCCCCAGAGGATCTGGAGG GCCAGAAGAGGACTTCTATGTATCCCCAGAGGATCTGGAGG < 41bp 0.565049785435397 0.89787851656517 0.2831087 0.3120486 prediction 0.665657462259546 Functional Gain - DNAJC5B ENSG00000147570 CDS Human protein_coding chr8:66992736 chr8:66992737 synonymous SNV . 0 22 hPsi_associated_SNPs_26147 0 0 0 3 1 exosome 0.438718332404147 0.43871228662098 0 0 hPsi_site_19871 iPseU_CNN:0;iRNA_PseU:0 19872 chr19 18124408 18124408 1 + G A rs188140062 18124407 + 18124387 18124427 41 AGGCGTTCAGGAAAGCAGGTTGTCAGAGCTATGTGGAGTCT AGGCGTTCAGGAAAGCAGGTTATCAGAGCTATGTGGAGTCT < 41bp 0.527340202572995 0.860162296511327 0.34600228 0.49330783 prediction 0.665644187876665 Functional Gain - ARRDC2 ENSG00000105643 UTR3 Human protein_coding chr19:18124407 chr19:18124408 . . 0 22 hPsi_associated_SNPs_26148 0 0 1 0 0 cytosol 0.437604619403699 0.438482637109712 0 0 hPsi_site_19872 iPseU_CNN:0;iRNA_PseU:0 19873 chr1 152671472 152671472 1 + G A UCEC 152671471 + 152671451 152671491 41 CTCCAAAGTGCCGACCTCAGTGCCCAGCCCCATGCCCACCT CTCCAAAGTGCCGACCTCAGTACCCAGCCCCATGCCCACCT < 41bp 0.55097121080864 0.883787678257363 0.32353938 0.56708187 prediction 0.665632934897446 Functional Gain - LCE2A ENSG00000187173 CDS Human protein_coding chr1:152671471 chr1:152671472 nonsynonymous SNV 0.031 1 22 hPsi_associated_SNPs_26149 0 0 0 0 0 unknown 0.438718600802644 0.438743761985313 0.13416374 0 hPsi_site_19873 iPseU_CNN:0.13416374;iRNA_PseU:0 19874 chr11 66262718 66262718 1 + C A LIHC 66262717 + 66262697 66262737 41 CTTTGACCAGGAAACAGTGATCAACCCAGAGACGGGCGAGC CTTTGACCAGGAAACAGTGATAAACCCAGAGACGGGCGAGC < 41bp 0.473562395155652 0.832811198905816 0.26697358 0.4460926 prediction 0.665622397811633 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262717 chr11:66262718 synonymous SNV . 0 22 hPsi_associated_SNPs_26150 0 0 1 0 2 Nucleus 0.438718513135461 0.438718628791812 0 0 hPsi_site_19874 iPseU_CNN:0;iRNA_PseU:0 19875 chr19 36113999 36113999 1 + C A rs540812488 36113998 + 36113978 36114018 41 GCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCA GCGCCAGGATTCCTCGGCAGTAGTCCCCACCCGCACCTGCA < 41bp 0.479909467401991 0.832810868804195 0.20601225 0.5501105 prediction 0.66562173760839 Functional Gain - HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36113998 chr19:36113999 synonymous SNV . 0 22 hPsi_associated_SNPs_26151 0 0 1 0 0 chromatin 0.438459781521247 0.44019549259685 0.100221 0 hPsi_site_19875 iPseU_CNN:0.100221;iRNA_PseU:0 19876 chrX 150349203 150349203 1 + C A BLCA 150349202 + 150349182 150349222 41 CTGGCCACCCCGACCGTGCCTCTGGCCACCCTAAGCCCCAT CTGGCCACCCCGACCGTGCCTATGGCCACCCTAAGCCCCAT < 41bp 0.530409198945397 0.863216121640815 0.2695061 0.5502584 prediction 0.665613845390836 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150349202 chrX:150349203 nonsynonymous SNV 0.021 3 22 hPsi_associated_SNPs_26152 0 0 0 0 0 exosome 0.438718590112888 0.438718619634139 0.1005168 0 hPsi_site_19876 iPseU_CNN:0.1005168;iRNA_PseU:0 19877 chr12 57908520 57908520 1 + C A UCEC 57908519 + 57908499 57908539 41 CAAGAGCTGGGATGTTTGTGTCTAAGTTCTTTGGGGGCTAT CAAGAGCTGGGATGTTTGTGTATAAGTTCTTTGGGGGCTAT < 41bp 0.523772796026388 0.856576679661045 0.42587727 0.6529008 prediction 0.665607767269313 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57908519 chr12:57908520 nonsynonymous SNV 0.965 0 22 hPsi_associated_SNPs_26153 0 0 1 0 1 Cytosol 0.438725803541606 0.438715457355888 0.3058016 0 hPsi_site_19877 iPseU_CNN:0.3058016;iRNA_PseU:0 19878 chr17 17701797 17701797 1 + G A LUSC 17701796 + 17701776 17701816 41 GGCCGGGAAGCTCTTTGGGCTGCAGGAGGCCATGAAGGTGG GGCCGGGAAGCTCTTTGGGCTACAGGAGGCCATGAAGGTGG < 41bp 0.447199478152053 0.83280354470118 0.30297595 0.3565649 prediction 0.66560708940236 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17701796 chr17:17701797 synonymous SNV . 0 22 hPsi_associated_SNPs_26154 0 0 1 0 0 chromatin 0.438718592993198 0.438718592996528 0 0 hPsi_site_19878 iPseU_CNN:0;iRNA_PseU:0 19879 chr19 46026015 46026015 1 + G A CESC 46026014 + 46025994 46026034 41 GGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAAGCGGAGG GGGCCCACAGCCCCCAAAGCTAAGAGTGGTCGAAGCGGAGG < 41bp 0.409005556945914 0.832798594209928 0.22730961 0.35081175 prediction 0.665597188419857 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46026014 chr19:46026015 nonsynonymous SNV 0.651 0 22 hPsi_associated_SNPs_26155 0 0 1 0 3 Ribosome 0.436708295767037 0.438719076939382 0 0 hPsi_site_19879 iPseU_CNN:0;iRNA_PseU:0 19880 chr1 150131080 150131080 1 + G A OV 150131079 + 150131059 150131099 41 CAAGAGGAAGACCCTTCCCCTGAGGAACCAACCTCTTGTGC CAAGAGGAAGACCCTTCCCCTAAGGAACCAACCTCTTGTGC < 41bp 0.443887503578375 0.832791781586246 0.39468557 0.59693223 prediction 0.665583563172491 Functional Gain - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131079 chr1:150131080 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_26156 0 0 0 0 1 Ribosome 0.438718592995102 0.438718592995093 0.19386446 0 hPsi_site_19880 iPseU_CNN:0.19386446;iRNA_PseU:0 19881 chr1 19062184 19062184 1 + C A BLCA 19062183 + 19062163 19062203 41 CGCAGCCACAGGCTGACTTCTCCATCTCCCCGCTGCATGGC CGCAGCCACAGGCTGACTTCTACATCTCCCCGCTGCATGGC < 41bp 0.46050697739658 0.832786977461224 0.17654514 0.49854097 prediction 0.665573954922449 Functional Gain - PAX7 ENSG00000009709 CDS Human protein_coding chr1:19062183 chr1:19062184 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26157 0 0 0 0 1 exosome 0.43791976391886 0.436955909276118 0 0 hPsi_site_19881 iPseU_CNN:0;iRNA_PseU:0 19882 chr1 36060236 36060236 1 + G A LUAD 36060235 + 36060215 36060255 41 AGTGTGGGCAGTGGGCATGGTGAAACCAAGGCTTCGGAGAA AGTGTGGGCAGTGGGCATGGTAAAACCAAGGCTTCGGAGAA < 41bp 0.550546339884414 0.883327995548842 0.32270825 0.6671853 prediction 0.665563311328856 Functional Gain - TFAP2E ENSG00000116819 CDS Human protein_coding chr1:36060235 chr1:36060236 nonsynonymous SNV 0.028 1 22 hPsi_associated_SNPs_26158 0 0 0 0 0 nucleoplasm 0.438718592876788 0.438718593948878 0.3343706 0 hPsi_site_19882 iPseU_CNN:0.3343706;iRNA_PseU:0 19883 chr18 2616466 2616466 1 + G A BLCA 2616465 + 2616445 2616485 41 GAGGAGCAGATTGCTAAAGTTGATAGAGAATATGAAGAATG GAGGAGCAGATTGCTAAAGTTAATAGAGAATATGAAGAATG < 41bp 0.455452090170418 0.832778723085961 0.39308095 0.5538328 prediction 0.665557446171921 Functional Gain - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2616465 chr18:2616466 nonsynonymous SNV 0.254 0 22 hPsi_associated_SNPs_26159 0 0 1 0 1 Cytosol 0.438718613732125 0.43871637220085 0.1076656 0 hPsi_site_19883 iPseU_CNN:0.1076656;iRNA_PseU:0 19884 chr2 219000016 219000016 1 + C A COAD 219000015 + 218999995 219000035 41 GAAGCGCTACTTGGTCAAATTCATATGTCTCAGCATCTGGG GAAGCGCTACTTGGTCAAATTAATATGTCTCAGCATCTGGG < 41bp 0.473718481502772 0.832777331888991 0.46137902 0.7195524 prediction 0.665554663777983 Functional Gain - CXCR2 ENSG00000180871 CDS Human protein_coding chr2:219000015 chr2:219000016 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_26160 0 0 0 0 0 exosome 0.438766923161822 0.438718567568791 0.4391048 0 hPsi_site_19884 iPseU_CNN:0.4391048;iRNA_PseU:0 19885 chr11 10785918 10785918 1 + C A SKCM 10785917 + 10785897 10785937 41 GAGAAAGTGCAGGCCGATGTTCCTCCAGAGATTCTCAATAA GAGAAAGTGCAGGCCGATGTTACTCCAGAGATTCTCAATAA < 41bp 0.530498983575985 0.863275645036848 0.22964072 0.5927566 prediction 0.665553322921725 Functional Gain - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10785917 chr11:10785918 nonsynonymous SNV 0.696 2 22 hPsi_associated_SNPs_26161 0 0 0 0 1 Cytosol 0.438727032608784 0.438491236377521 0.1855132 0 hPsi_site_19885 iPseU_CNN:0.1855132;iRNA_PseU:0 19886 chr16 705361 705361 1 + G A rs181867252 705360 + 705340 705380 41 CTGGCGGCTGCGTGGCGGGGTGCTGCGTTCCTGCCCCGTGG CTGGCGGCTGCGTGGCGGGGTACTGCGTTCCTGCCCCGTGG < 41bp 0.549849529912709 0.882625613408217 0.27724767 0.6606563 prediction 0.665552166991017 Functional Gain - WDR90 ENSG00000161996 CDS Human protein_coding chr16:705360 chr16:705361 synonymous SNV . 0 22 hPsi_associated_SNPs_26162 0 0 1 0 1 Cytosol 0.438698063126623 0.43874768347836 0.3213126 0 hPsi_site_19886 iPseU_CNN:0.3213126;iRNA_PseU:0 19887 chr14 59112077 59112077 1 + G A PAAD 59112076 + 59112056 59112096 41 CCACAATTTAATTCCCTTGATGTCATTGCAGATGTGAATCC CCACAATTTAATTCCCTTGATATCATTGCAGATGTGAATCC < 41bp 0.557759322202675 0.890535380014514 0.20598006 0.25035217 prediction 0.665552115623679 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112076 chr14:59112077 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26163 0 0 0 0 0 exosome 0.438718592950556 0.438718592824333 0 0 hPsi_site_19887 iPseU_CNN:0;iRNA_PseU:0 19888 chr6 54173634 54173634 1 + C A LUSC 54173633 + 54173613 54173653 41 AGAGAAAATTCTGATTGCTGTCCTGACTACAAGTCCTTTTG AGAGAAAATTCTGATTGCTGTACTGACTACAAGTCCTTTTG < 41bp 0.485937778220929 0.832774160705214 0.24184877 0.73684126 prediction 0.665548321410427 Functional Gain - TINAG ENSG00000137251 CDS Human protein_coding chr6:54173633 chr6:54173634 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26164 0 0 0 1 1 exosome 0.438727049403161 0.438114436760183 0.47368252 0 hPsi_site_19888 iPseU_CNN:0.47368252;iRNA_PseU:0 19889 chr22 39413823 39413823 1 + G A STAD 39413822 + 39413802 39413842 41 GGTGCTTCCTCTCTTGGTTCTGCGACGACATACTGTCTCCT GGTGCTTCCTCTCTTGGTTCTACGACGACATACTGTCTCCT < 41bp 0.567159651519728 0.899930780340415 0.22969106 0.67175657 prediction 0.665542257641375 Functional Gain - APOBEC3C ENSG00000244509 CDS Human protein_coding chr22:39413822 chr22:39413823 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_26165 0 0 1 0 1 exosome 0.438850201934524 0.43816913780671 0.34351314 0 hPsi_site_19889 iPseU_CNN:0.34351314;iRNA_PseU:0 19890 chr11 4903504 4903504 1 + C A rs143185351 4903503 + 4903483 4903523 41 AGCCATGGCCTTTGACCGCTTCGTGGCTATCTGTAACCCAC AGCCATGGCCTTTGACCGCTTAGTGGCTATCTGTAACCCAC < 41bp 0.486916342068309 0.832769824848456 0.2598225 0.6253406 prediction 0.665539649696913 Functional Gain - OR51T1 ENSG00000176900 CDS Human protein_coding chr11:4903503 chr11:4903504 nonsynonymous SNV 0.024 1 22 hPsi_associated_SNPs_26166 0 0 0 0 0 unknown 0.438773341197502 0.438718593887113 0.2506812 0 hPsi_site_19890 iPseU_CNN:0.2506812;iRNA_PseU:0 19891 chr17 78210803 78210803 1 + C A BLCA 78210802 + 78210782 78210822 41 GACTGGATACCAGCCTTTCATCCTAACAGGGGAGACAGCTG GACTGGATACCAGCCTTTCATACTAACAGGGGAGACAGCTG < 41bp 0.463782467387975 0.8327688412204 0.22817346 0.3096779 prediction 0.6655376824408 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78210802 chr17:78210803 synonymous SNV . 0 22 hPsi_associated_SNPs_26167 0 0 0 0 2 chromatin 0.438718506490086 0.438625861217608 0 0 hPsi_site_19891 iPseU_CNN:0;iRNA_PseU:0 19892 chr20 56726071 56726071 1 + G A LUAD 56726070 + 56726050 56726090 41 GGCTGAACGCATGAACCTTGTGGGTCAGGATGAGATCTGGT GGCTGAACGCATGAACCTTGTAGGTCAGGATGAGATCTGGT < 41bp 0.4426659182738 0.832766221889037 0.19141728 0.47020188 prediction 0.665532443778073 Functional Gain - C20orf85 ENSG00000124237 CDS Human protein_coding chr20:56726070 chr20:56726071 synonymous SNV . 0 22 hPsi_associated_SNPs_26168 0 0 0 0 1 unknown 0.437601688598204 0.438787902297138 0 0 hPsi_site_19892 iPseU_CNN:0;iRNA_PseU:0 19893 chr22 42301553 42301553 1 + G A UCEC 42301552 + 42301532 42301572 41 CCCGGGCCAGCGGGCAGTGCTGCTGGCCGAAGCTGCCCGCA CCCGGGCCAGCGGGCAGTGCTACTGGCCGAAGCTGCCCGCA < 41bp 0.550386453907982 0.883152126567726 0.2612511 0.6943613 prediction 0.66553134531949 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301552 chr22:42301553 synonymous SNV . 0 22 hPsi_associated_SNPs_26169 0 0 1 0 0 Ribosome 0.438727482670261 0.43873786358914 0.3887226 0 hPsi_site_19893 iPseU_CNN:0.3887226;iRNA_PseU:0 19894 chr10 90575228 90575228 1 + C A UCEC 90575227 + 90575207 90575247 41 TGTAGTAATATCATGTTACTTCTGGGTGGATTCAACACCAA TGTAGTAATATCATGTTACTTATGGGTGGATTCAACACCAA < 41bp 0.52712780789013 0.85988515929496 0.3013146 0.4063909 prediction 0.665514702809661 Functional Gain - LIPM ENSG00000173239 CDS Human protein_coding chr10:90575227 chr10:90575228 nonsynonymous SNV 0.813 0 22 hPsi_associated_SNPs_26170 0 0 0 0 1 exosome 0.438718555464729 0.438718875318662 0 0 hPsi_site_19894 iPseU_CNN:0;iRNA_PseU:0 19895 chr12 4698119 4698119 1 + C A rs532614407 4698118 + 4698098 4698138 41 TCCAGGTTGGAAGTAAACTTTCGGTTCAGATCCAGAAGCCA TCCAGGTTGGAAGTAAACTTTAGGTTCAGATCCAGAAGCCA < 41bp 0.51840766202956 0.851151824627013 0.8292371 0.8323181 prediction 0.665488325194905 Functional Gain - RAD51AP1;DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4698118 chr12:4698119 stopgain 0.001 0 22 hPsi_associated_SNPs_26171 0 0 0 0 2 unknown 0.438718461792027 0.43871861582465 0.006162 0 hPsi_site_19895 iPseU_CNN:0.006162;iRNA_PseU:0 19896 chr21 37618397 37618397 1 + C A COAD 37618396 + 37618376 37618416 41 GGAAGGGAAGAACGTGGAGTTCATCCACAGCTTGCTGCAGA GGAAGGGAAGAACGTGGAGTTAATCCACAGCTTGCTGCAGA < 41bp 0.519059607081549 0.851803137145297 0.28759086 0.5689886 prediction 0.665487060127496 Functional Gain - DOPEY2 ENSG00000142197 CDS Human protein_coding chr21:37618396 chr21:37618397 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26172 0 0 0 0 0 cytosol 0.438276035233117 0.437207339848161 0.1379772 0 hPsi_site_19896 iPseU_CNN:0.1379772;iRNA_PseU:0 19897 chr9 140137589 140137589 1 + C T SKCM 140137590 - 140137570 140137610 41 CAACCGTCAGGTAGCGGCCATGGCGGGGGTCGCAGGCAGCC CAACCGTCAGGTAGCGGCCATAGCGGGGGTCGCAGGCAGCC < 41bp 0.429478718493418 0.832740771775103 0.24018511 0.5125463 prediction 0.665481543550205 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137590 chr9:140137589 nonsynonymous SNV 0.918 2 22 hPsi_associated_SNPs_26173 0 0 0 0 0 Cytosol 0.438707061256899 0.438365372433462 0.0250926 0 hPsi_site_19897 iPseU_CNN:0.0250926;iRNA_PseU:0 19898 chr19 1980422 1980422 1 + G A rs376028461 1980421 + 1980401 1980441 41 GGCCGAAATTTCTACACCTGTGTCTAGTCCTCCCCTCCAAG GGCCGAAATTTCTACACCTGTATCTAGTCCTCCCCTCCAAG < 41bp 0.457865855070075 0.83273776188735 0.24429387 0.44455257 prediction 0.6654755237747 Functional Gain - CSNK1G2 ENSG00000133275 UTR3 Human protein_coding chr19:1980421 chr19:1980422 . . 0 22 hPsi_associated_SNPs_26174 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_19898 iPseU_CNN:0;iRNA_PseU:0 19899 chr17 21319270 21319270 1 + G A SKCM 21319269 + 21319249 21319289 41 AACGCCGTGGTGGCCCTGCGTGACGGCAAGCTCTGCCTCAT AACGCCGTGGTGGCCCTGCGTAACGGCAAGCTCTGCCTCAT < 41bp 0.427648485179161 0.83273281103531 0.35377192 0.6795311 prediction 0.665465622070619 Functional Gain - KCNJ12;KCNJ18 ENSG00000184185 CDS Human protein_coding chr17:21319269 chr17:21319270 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_26175 0 0 0 0 0 unknown 0.438706329189524 0.438744234156464 0.3590622 0 hPsi_site_19899 iPseU_CNN:0.3590622;iRNA_PseU:0 19900 chr12 49724971 49724971 1 + C A SKCM 49724970 + 49724950 49724990 41 GAAGTATAGGACCCCAGACCTCCCTCTAAATTTTCCATGCC GAAGTATAGGACCCCAGACCTACCTCTAAATTTTCCATGCC < 41bp 0.468348242403674 0.832727797623816 0.31406897 0.578786 prediction 0.665455595247632 Functional Gain - TROAP ENSG00000135451 CDS Human protein_coding chr12:49724970 chr12:49724971 synonymous SNV . 0 22 hPsi_associated_SNPs_26176 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995103 0.157572 0 hPsi_site_19900 iPseU_CNN:0.157572;iRNA_PseU:0 19901 chr22 24452752 24452752 1 + C A LUAD 24452751 + 24452731 24452771 41 AAAGCGGCGGTCTGCCCGTGTCCGAAACACCAAGTGCAAAA AAAGCGGCGGTCTGCCCGTGTACGAAACACCAAGTGCAAAA < 41bp 0.470595808255809 0.832722675234741 0.36186647 0.73214006 prediction 0.665445350469483 Functional Gain - CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24452751 chr22:24452752 synonymous SNV . 0 22 hPsi_associated_SNPs_26177 0 0 1 0 1 Cytosol 0.438718592998837 0.438718626762382 0.46428012 0 hPsi_site_19901 iPseU_CNN:0.46428012;iRNA_PseU:0 19902 chr2 198571708 198571708 1 + G A UCEC 198571707 + 198571687 198571727 41 TTTGGGACTTTGCTGCAGCCTGTCACCCCAAGCCTAGCTGA TTTGGGACTTTGCTGCAGCCTATCACCCCAAGCCTAGCTGA < 41bp 0.548492668133062 0.881213865398349 0.23095942 0.38066784 prediction 0.665442394530574 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571707 chr2:198571708 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26178 0 0 1 0 0 Ribosome 0.438718592860766 0.438718592995007 0 0 hPsi_site_19902 iPseU_CNN:0;iRNA_PseU:0 19903 chr22 39883604 39883604 1 + G A rs201450879 39883603 + 39883583 39883623 41 CTCGCCCCTGCTGCAGCCGCTGCCGCCCAGCAAGGCGGCCG CTCGCCCCTGCTGCAGCCGCTACCGCCCAGCAAGGCGGCCG < 41bp 0.563717034249777 0.896436405769632 0.30079052 0.75495946 prediction 0.66543874303971 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883603 chr22:39883604 synonymous SNV . 0 22 hPsi_associated_SNPs_26179 0 0 0 0 0 Endoplasmic reticulum 0.438715892555371 0.438613581676478 0.50991892 0 hPsi_site_19903 iPseU_CNN:0.50991892;iRNA_PseU:0 19904 chr13 111973266 111973266 1 + C A LUAD 111973265 + 111973245 111973285 41 ACGTGCTGGAAGTGAAGAACTCTCCGCGGCACCTCCTGAAG ACGTGCTGGAAGTGAAGAACTATCCGCGGCACCTCCTGAAG < 41bp 0.474444629355186 0.832717469030792 0.27893573 0.48690298 prediction 0.665434938061584 Functional Gain - TEX29 ENSG00000153495 CDS Human protein_coding chr13:111973265 chr13:111973266 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_26180 0 0 0 0 2 exosome 0.438718804776067 0.438718227472895 0 0 hPsi_site_19904 iPseU_CNN:0;iRNA_PseU:0 19905 chr13 28844922 28844922 1 + C A COAD 28844921 + 28844901 28844941 41 CATATATTGTCCAACTAAGTTCTGCATTGCGTACCATTCAT CATATATTGTCCAACTAAGTTATGCATTGCGTACCATTCAT < 41bp 0.484213997580953 0.832716873757575 0.35082507 0.34896597 prediction 0.665433747515149 Functional Gain - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28844921 chr13:28844922 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26181 0 0 1 0 2 Ribosome 0.438718703114159 0.438718593530913 0 0 hPsi_site_19905 iPseU_CNN:0;iRNA_PseU:0 19906 chr1 240072333 240072333 1 + C A UCEC 240072332 + 240072312 240072352 41 ATACCCAAAACCTTTTGGAATCTGGGCTACTGGCTGTGCTA ATACCCAAAACCTTTTGGAATATGGGCTACTGGCTGTGCTA < 41bp 0.500867210743476 0.833584061039119 0.43195972 0.63295996 prediction 0.665433700591286 Functional Gain - CHRM3 ENSG00000133019 CDS Human protein_coding chr1:240072332 chr1:240072333 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26182 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.26591992 0 hPsi_site_19906 iPseU_CNN:0.26591992;iRNA_PseU:0 19907 chr2 103013002 103013002 1 + G A BLCA 103013001 + 103012981 103013021 41 GCATTTTCAGCTGTTGTTGATGAAATCCACTCACTGATAGA GCATTTTCAGCTGTTGTTGATAAAATCCACTCACTGATAGA < 41bp 0.549299308379107 0.882015201642897 0.3997767 0.60966164 prediction 0.665431786527579 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:103013001 chr2:103013002 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_26183 0 0 0 0 1 Nucleus 0.438718488233612 0.43871894554384 0.21932328 0 hPsi_site_19907 iPseU_CNN:0.21932328;iRNA_PseU:0 19908 chr3 56655611 56655611 1 + G A BLCA 56655610 + 56655590 56655630 41 AGTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTT AGTAGTCTCCTGCCTTTAGCTAAAAATCAAGAAGAGAGTTT < 41bp 0.450838892537708 0.832712778183857 0.13874263 0.24916494 prediction 0.665425556367714 Functional Gain - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56655610 chr3:56655611 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_26184 0 0 1 0 1 chromatin 0.438717559331167 0.438432136197807 0 0 hPsi_site_19908 iPseU_CNN:0;iRNA_PseU:0 19909 chr15 40501921 40501921 1 + G A PRAD 40501920 + 40501900 40501940 41 GTTAAGTGCCTCTGCAGAGTTGTGTATAGAAGACAGACCAA GTTAAGTGCCTCTGCAGAGTTATGTATAGAAGACAGACCAA < 41bp 0.564801949908953 0.897511897989498 0.22213066 0.2843991 prediction 0.665419896161091 Functional Gain - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40501920 chr15:40501921 synonymous SNV . 0 22 hPsi_associated_SNPs_26185 0 0 1 0 2 Nucleus 0.438136079309246 0.438686980877216 0 0 hPsi_site_19909 iPseU_CNN:0;iRNA_PseU:0 19910 chrX 129148268 129148268 1 + C A UCEC 129148267 + 129148247 129148287 41 GTTCTTACCCGTATGCATTTTCTGTGGCCCGGCCTCTGACT GTTCTTACCCGTATGCATTTTATGTGGCCCGGCCTCTGACT < 41bp 0.53254564214295 0.865254520934352 0.37803298 0.41706318 prediction 0.665417757582804 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148267 chrX:129148268 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26186 0 0 1 0 0 Cytosol 0.438701738516968 0.438890719555149 0 0 hPsi_site_19910 iPseU_CNN:0;iRNA_PseU:0 19911 chr16 28913912 28913912 1 + G A rs186012808 28913911 + 28913891 28913931 41 TCCACCACAGGCTATGTGGGTGCAGCCACCGTGGGAGCAGC TCCACCACAGGCTATGTGGGTACAGCCACCGTGGGAGCAGC < 41bp 0.444250524238901 0.832702954108384 0.5754637 0.8287233 prediction 0.665405908216768 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28913911 chr16:28913912 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26187 1 0 1 0 2 chromatin 0.438718401634182 0.438734958691445 0.5065192 0 hPsi_site_19911 iPseU_CNN:0.5065192;iRNA_PseU:0 19912 chr1 87041204 87041204 1 + C A UCEC 87041203 + 87041183 87041223 41 CTACAAGGATATGTACCTGTTCTTGGAGCCAATGTGACTGC CTACAAGGATATGTACCTGTTATTGGAGCCAATGTGACTGC < 41bp 0.473225682211822 0.832702233649878 0.7535765 0.94562817 prediction 0.665404467299757 Functional Gain - CLCA4 ENSG00000016602 CDS Human protein_coding chr1:87041203 chr1:87041204 nonsynonymous SNV 0.203 0 22 hPsi_associated_SNPs_26188 0 0 0 0 1 unknown 0.438570338410228 0.427269488657237 0.38410334 0 hPsi_site_19912 iPseU_CNN:0.38410334;iRNA_PseU:0 19913 chr19 45489719 45489719 1 + G A BLCA 45489718 + 45489698 45489738 41 CCCATGTTGCCTCAGAGGGCTGAGGACTATGGGCCTGTGGA CCCATGTTGCCTCAGAGGGCTAAGGACTATGGGCCTGTGGA < 41bp 0.421152117345934 0.832701531387945 0.24916732 0.5014239 prediction 0.665403062775891 Functional Gain - CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45489718 chr19:45489719 nonsynonymous SNV 0.972 1 22 hPsi_associated_SNPs_26189 0 0 1 0 1 Cytosol 0.438718669015818 0.438718588622429 0.00284780000000007 0 hPsi_site_19913 iPseU_CNN:0.00284780000000007;iRNA_PseU:0 19914 chr19 16060238 16060238 1 + G A LUAD 16060237 + 16060217 16060257 41 AATGTGCTCATGAGCCCCCGTGACTGTGCCCATCTTGTGGC AATGTGCTCATGAGCCCCCGTAACTGTGCCCATCTTGTGGC < 41bp 0.444012884245602 0.832699964120209 0.15245956 0.25172442 prediction 0.665399928240417 Functional Gain - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060237 chr19:16060238 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26190 0 0 0 0 0 unknown 0.438731962150858 0.438713193772595 0 0 hPsi_site_19914 iPseU_CNN:0;iRNA_PseU:0 19915 chr6 167550186 167550186 1 + C A LUSC 167550185 + 167550165 167550205 41 GGCGACTAAGTCATTCCGGCTCCGATCCAGAACACTACCGC GGCGACTAAGTCATTCCGGCTACGATCCAGAACACTACCGC < 41bp 0.530531753696703 0.863214061921548 0.4447669 0.8020514 prediction 0.665364616449689 Functional Gain - CCR6 ENSG00000112486 CDS Human protein_coding chr6:167550185 chr6:167550186 synonymous SNV . 0 22 hPsi_associated_SNPs_26191 0 0 0 0 0 exosome 0.438712120508013 0.438451741718339 0.6041028 0 hPsi_site_19915 iPseU_CNN:0.6041028;iRNA_PseU:0 19916 chr11 55658729 55658729 1 + G A LUSC 55658728 + 55658708 55658748 41 ATATCACTGGAAAATCTGAATGTTTTCTTGTATGGGGGGCT ATATCACTGGAAAATCTGAATATTTTCTTGTATGGGGGGCT < 41bp 0.441189429713539 0.832674553804243 0.29252166 0.43554413 prediction 0.665349107608486 Functional Gain - TRIM51 ENSG00000124900 CDS Human protein_coding chr11:55658728 chr11:55658729 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_26192 0 0 0 0 0 unknown 0.438718804315196 0.438718674519452 0 0 hPsi_site_19916 iPseU_CNN:0;iRNA_PseU:0 19917 chr10 75549980 75549980 1 + G A CESC 75549979 + 75549959 75549999 41 CAGAGTACTTGGTATCTGGATGAATCGACACTCACTGACAA CAGAGTACTTGGTATCTGGATAAATCGACACTCACTGACAA < 41bp 0.559499251949288 0.892171659129073 0.622816 0.86731374 prediction 0.66534481435957 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75549979 chr10:75549980 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_26193 0 0 1 0 2 Cytosol 0.4366908680031 0.44113708730673 0.48899548 0 hPsi_site_19917 iPseU_CNN:0.48899548;iRNA_PseU:0 19918 chr19 681555 681555 1 + G A PRAD 681554 + 681534 681574 41 GCGTGCGCCACGCGGGCAGCTGCGCAGGTGCAGACGCAGGG GCGTGCGCCACGCGGGCAGCTACGCAGGTGCAGACGCAGGG < 41bp 0.441374004421529 0.832666370191818 0.26232672 0.614054 prediction 0.665332740383636 Functional Gain - FSTL3 ENSG00000070404 CDS Human protein_coding chr19:681554 chr19:681555 nonsynonymous SNV 0.531 5 22 hPsi_associated_SNPs_26194 0 0 1 0 1 Ribosome 0.439401681724868 0.439225848066869 0.228108 0 hPsi_site_19918 iPseU_CNN:0.228108;iRNA_PseU:0 19919 chr12 51323796 51323796 1 + G A GBM 51323795 + 51323775 51323815 41 CCTGCCTGGCACCTTCTGTTTGATGGGTGCAACCTGACCAG CCTGCCTGGCACCTTCTGTTTAATGGGTGCAACCTGACCAG < 41bp 0.423345186911106 0.832664110427046 0.44724342 0.88760954 prediction 0.665328220854092 Functional Gain - METTL7A ENSG00000185432 CDS Human protein_coding chr12:51323795 chr12:51323796 nonsynonymous SNV 0.442 4 22 hPsi_associated_SNPs_26195 0 0 1 0 1 Endoplasmic reticulum 0.438718625925625 0.438718593034943 0.77521908 0 hPsi_site_19919 iPseU_CNN:0.77521908;iRNA_PseU:0 19920 chr9 113563171 113563171 1 + G A UCEC 113563170 + 113563150 113563190 41 TGTACAATCTCATGCGTCTATGTTGGAGCAAGCTGCCTGCA TGTACAATCTCATGCGTCTATATTGGAGCAAGCTGCCTGCA < 41bp 0.432114701319662 0.832663952786361 0.35660443 0.5783758 prediction 0.665327905572721 Functional Gain - MUSK ENSG00000030304 CDS Human protein_coding chr9:113563170 chr9:113563171 nonsynonymous SNV 0.978 5 22 hPsi_associated_SNPs_26196 0 0 0 0 0 exosome 0.438711032648753 0.438652871571354 0.1567516 0 hPsi_site_19920 iPseU_CNN:0.1567516;iRNA_PseU:0 19921 chr9 137711969 137711969 1 + C T LAML 137711970 - 137711950 137711990 41 CCGATGAGCCCGATCAGGCCTGGATGACCCTGTGGGAAAAT CCGATGAGCCCGATCAGGCCTAGATGACCCTGTGGGAAAAT < 41bp 0.432139429995853 0.832663571699331 0.30289897 0.4374743 prediction 0.665327143398662 Functional Gain - COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137711970 chr9:137711969 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_26197 0 0 0 0 1 Nucleus 0.43871439084786 0.438718543252072 0 0 hPsi_site_19921 iPseU_CNN:0;iRNA_PseU:0 19922 chr1 1269424 1269424 1 + G A SARC 1269423 + 1269403 1269443 41 GGTGGTGACGGACTGGCACATGCTGCCCACGGAGGCGCTGG GGTGGTGACGGACTGGCACATACTGCCCACGGAGGCGCTGG < 41bp 0.447269092613834 0.832662325672262 0.27716947 0.6336615 prediction 0.665324651344525 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269423 chr1:1269424 nonsynonymous SNV 0.070 1 22 hPsi_associated_SNPs_26198 0 0 0 0 0 chromatin 0.438720633047397 0.438714323143205 0.267323 0 hPsi_site_19922 iPseU_CNN:0.267323;iRNA_PseU:0 19923 chr9 125141124 125141124 1 + C A LIHC 125141123 + 125141103 125141143 41 CTACATCAGCTGGGAGTCTTTCTCCAACGTGAGCTATTACA CTACATCAGCTGGGAGTCTTTATCCAACGTGAGCTATTACA < 41bp 0.474997134540075 0.832658452687101 0.31760845 0.31960177 prediction 0.665316905374202 Functional Gain - PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125141123 chr9:125141124 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26199 0 0 1 0 2 nucleolus 0.438713990633643 0.440439831683675 0 0 hPsi_site_19923 iPseU_CNN:0;iRNA_PseU:0 19924 chr11 34478338 34478338 1 + G A SKCM 34478337 + 34478317 34478357 41 AGCAACATGCCACCTGGCATTGAGGCCAGTCCTGACAAAAT AGCAACATGCCACCTGGCATTAAGGCCAGTCCTGACAAAAT < 41bp 0.414235952716722 0.832656889654489 0.29446426 0.7546429 prediction 0.665313779308979 Functional Gain - CAT ENSG00000121691 CDS Human protein_coding chr11:34478337 chr11:34478338 nonsynonymous SNV 0.968 5 22 hPsi_associated_SNPs_26200 0 0 1 2 1 Ribosome 0.438727582665628 0.438711070388771 0.5092858 0 hPsi_site_19924 iPseU_CNN:0.5092858;iRNA_PseU:0 19925 chr11 55340057 55340057 1 + G A rs144962866 55340056 + 55340036 55340076 41 GTGGCCTGGGTGGGATCCTGTGTGCATTCTTTAGTTCAGAT GTGGCCTGGGTGGGATCCTGTATGCATTCTTTAGTTCAGAT < 41bp 0.445758343139036 0.832656723511479 0.601349 0.60137516 prediction 0.665313447022958 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55340056 chr11:55340057 nonsynonymous SNV 0.908 0 22 hPsi_associated_SNPs_26201 0 0 0 0 0 unknown 0.438718588316218 0.438718603873012 5.23199999999946e-05 0 hPsi_site_19925 iPseU_CNN:5.23199999999946e-05;iRNA_PseU:0 19926 chr3 26751571 26751571 1 + G A HNSC 26751570 + 26751550 26751590 41 CAAAAATGCCTTCAATAACCTGAAGGCCAGGGCCAGAATTG CAAAAATGCCTTCAATAACCTAAAGGCCAGGGCCAGAATTG < 41bp 0.421857008894588 0.83265524055276 0.25817108 0.31200027 prediction 0.665310481105519 Functional Gain - LRRC3B ENSG00000179796 CDS Human protein_coding chr3:26751570 chr3:26751571 synonymous SNV . 0 22 hPsi_associated_SNPs_26202 0 0 0 0 0 exosome 0.438690060097282 0.438709666318171 0 0 hPsi_site_19926 iPseU_CNN:0;iRNA_PseU:0 19927 chr18 12978831 12978831 1 + C A UCEC 12978830 + 12978810 12978850 41 TCGCTCCAAATTTGGGAAGATCTTTCCATATTCTAGCAATA TCGCTCCAAATTTGGGAAGATATTTCCATATTCTAGCAATA < 41bp 0.503199328821062 0.835852387701828 0.24001935 0.28197467 prediction 0.665306117761534 Functional Gain - SEH1L ENSG00000085415 CDS Human protein_coding chr18:12978830 chr18:12978831 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26203 0 0 1 0 2 Ribosome 0.4387185883679 0.438718592998294 0 0 hPsi_site_19927 iPseU_CNN:0;iRNA_PseU:0 19928 chr17 40004200 40004200 1 + G A LUAD 40004199 + 40004179 40004219 41 CCACAGGTAGGTGGCTTTGATGGAGCTAATCGACTTAGGAG CCACAGGTAGGTGGCTTTGATAGAGCTAATCGACTTAGGAG < 41bp 0.436035134389551 0.832652696318407 0.19089714 0.32346937 prediction 0.665305392636814 Functional Gain - KLHL10 ENSG00000161594 CDS Human protein_coding chr17:40004199 chr17:40004200 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_26204 0 0 0 0 1 exosome 0.438718596550694 0.438784347872999 0 0 hPsi_site_19928 iPseU_CNN:0;iRNA_PseU:0 19929 chrX 151820141 151820141 1 + C A UCEC 151820140 + 151820120 151820160 41 GAGTATGTCTACATCAACTATCTTTTCTACAGTCGAGGACC GAGTATGTCTACATCAACTATATTTTCTACAGTCGAGGACC < 41bp 0.529489644950868 0.862140360080009 0.2290146 0.26263583 prediction 0.665301430258282 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151820140 chrX:151820141 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_26205 0 0 0 0 0 chromatin 0.438712529305624 0.438081490627169 0 0 hPsi_site_19929 iPseU_CNN:0;iRNA_PseU:0 19930 chrX 54469916 54469916 1 + C A UCEC 54469915 + 54469895 54469935 41 ACAGTTGTGGAAGACGGGAGTCTGCCCCAGGTGAGCTTATC ACAGTTGTGGAAGACGGGAGTATGCCCCAGGTGAGCTTATC < 41bp 0.527342842708495 0.859988741444666 0.47696367 0.6579328 prediction 0.665291797472341 Functional Gain - TSR2 ENSG00000158526 CDS Human protein_coding chrX:54469915 chrX:54469916 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26206 0 0 1 0 2 Ribosome 0.438718619576377 0.438718485613952 0.3158656 0 hPsi_site_19930 iPseU_CNN:0.3158656;iRNA_PseU:0 19931 chr8 6302569 6302569 1 + G A OV 6302568 + 6302548 6302588 41 GCCATCAAGCCCTGCTCAGTTGAGCTGCAGAAGTCTTTCTA GCCATCAAGCCCTGCTCAGTTAAGCTGCAGAAGTCTTTCTA < 41bp 0.439509544888644 0.832641567830873 0.27559912 0.6698949 prediction 0.665283135661745 Functional Gain - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6302568 chr8:6302569 synonymous SNV . 0 22 hPsi_associated_SNPs_26207 0 0 1 0 0 Nucleus 0.438052693995469 0.438678760539308 0.3397898 0 hPsi_site_19931 iPseU_CNN:0.3397898;iRNA_PseU:0 19932 chr19 59061320 59061320 1 + G A COAD 59061319 + 59061299 59061339 41 CCTTACAATGTTTGTAGAAATGTGAGCGTGTACTGCTGGCC CCTTACAATGTTTGTAGAAATATGAGCGTGTACTGCTGGCC < 41bp 0.428593260311334 0.832638437982494 0.2176972 0.2654252 prediction 0.665276875964988 Functional Gain - TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59061319 chr19:59061320 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26208 0 0 1 0 2 Cytosol 0.438687562129491 0.438718192095316 0 0 hPsi_site_19932 iPseU_CNN:0;iRNA_PseU:0 19933 chr20 61936860 61936860 1 + C A UCEC 61936859 + 61936839 61936879 41 CAAGGGCTACACCTTGCAGATCTTCGAGCTCACTGGCTCTG CAAGGGCTACACCTTGCAGATATTCGAGCTCACTGGCTCTG < 41bp 0.533611400999139 0.866245488938771 0.7966237 0.85410845 prediction 0.665268175879264 Functional Gain - COL20A1 ENSG00000101203 CDS Human protein_coding chr20:61936859 chr20:61936860 synonymous SNV . 0 22 hPsi_associated_SNPs_26209 0 0 0 0 2 exosome 0.438785803337632 0.436688557263701 0.1149695 0 hPsi_site_19933 iPseU_CNN:0.1149695;iRNA_PseU:0 19934 chr11 123811079 123811079 1 + G A READ 123811078 + 123811058 123811098 41 TGTGGTGACCTTAATCTTTGTGCCTTGCATCTACGTCTATA TGTGGTGACCTTAATCTTTGTACCTTGCATCTACGTCTATA < 41bp 0.551224541974407 0.883858011376781 0.19938812 0.32814187 prediction 0.665266938804748 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123811078 chr11:123811079 synonymous SNV . 0 22 hPsi_associated_SNPs_26210 0 0 0 0 0 exosome 0.438658627477341 0.438799692197997 0 0 hPsi_site_19934 iPseU_CNN:0;iRNA_PseU:0 19935 chr19 49110604 49110604 1 + G A rs142048567 49110603 + 49110583 49110623 41 TATGCTGCTTCCTCCACGTTTGCTGTGACCAACAGGGAGGA TATGCTGCTTCCTCCACGTTTACTGTGACCAACAGGGAGGA < 41bp 0.456340633115661 0.832630867731695 0.27284318 0.3164717 prediction 0.665261735463391 Functional Gain - SPACA4 ENSG00000177202 CDS Human protein_coding chr19:49110603 chr19:49110604 synonymous SNV . 0 22 hPsi_associated_SNPs_26211 0 0 0 0 0 unknown 0.438695757451603 0.438711821932823 0 0 hPsi_site_19935 iPseU_CNN:0;iRNA_PseU:0 19936 chr1 156554758 156554758 1 + C A rs551186311 156554757 + 156554737 156554777 41 AGGAAGCAGCACAGCAGGTGTCCAGCACAGGTGAGGGTGGG AGGAAGCAGCACAGCAGGTGTACAGCACAGGTGAGGGTGGG < 41bp 0.518435157428372 0.851065288143852 0.2554078 0.39267525 prediction 0.665260261430961 Functional Gain - TTC24 ENSG00000187862 CDS Human protein_coding chr1:156554757 chr1:156554758 synonymous SNV . 0 22 hPsi_associated_SNPs_26212 0 0 0 0 2 exosome 0.438718592995102 0.438718552455884 0 0 hPsi_site_19936 iPseU_CNN:0;iRNA_PseU:0 19937 chr11 55797981 55797981 1 + G A SKCM 55797980 + 55797960 55798000 41 TCTCAGAGTCACACTGTTCTTGGTATTCCTTCTGGTATATA TCTCAGAGTCACACTGTTCTTAGTATTCCTTCTGGTATATA < 41bp 0.523045892603858 0.855673788931199 0.19359842 0.27961415 prediction 0.665255792654682 Functional Gain - OR5AS1 ENSG00000181785 CDS Human protein_coding chr11:55797980 chr11:55797981 synonymous SNV . 0 22 hPsi_associated_SNPs_26213 0 0 0 0 0 unknown 0.438717842230058 0.438718601390482 0 0 hPsi_site_19937 iPseU_CNN:0;iRNA_PseU:0 Height 19938 chr7 64530074 64530074 1 + C A UCEC 64530073 + 64530053 64530093 41 GTGGTGGGGTGGCCCTGAATTCTTTTGAGGACCTAAGTCCT GTGGTGGGGTGGCCCTGAATTATTTTGAGGACCTAAGTCCT < 41bp 0.494624418600771 0.832624018081223 0.3225078 0.5371623 prediction 0.665248036162446 Functional Gain - CCT6P3 ENSG00000234585 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64530073 chr7:64530074 . . 0 22 hPsi_associated_SNPs_26214 0 0 0 1 2 unknown 0.438719667164724 0.438718595105129 0.0743246 0 hPsi_site_19938 iPseU_CNN:0.0743246;iRNA_PseU:0 19939 chr2 38908485 38908485 1 + G A CESC 38908484 + 38908464 38908504 41 TCGCGCATCAGTCCAGATGGTGAAGAAGGCTACCCCGGAGA TCGCGCATCAGTCCAGATGGTAAAGAAGGCTACCCCGGAGA < 41bp 0.438636205008857 0.832613760121091 0.5244229 0.9014826 prediction 0.665227520242182 Functional Gain - GALM ENSG00000143891 CDS Human protein_coding chr2:38908484 chr2:38908485 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26215 0 0 1 0 1 Ribosome 0.438718464504756 0.438718582680739 0.7541194 0 hPsi_site_19939 iPseU_CNN:0.7541194;iRNA_PseU:0 19940 chrX 79698451 79698451 1 + G A LIHC 79698450 + 79698430 79698470 41 TACAGAAATTGGTCAAGGTTTGCAATGGGCATGATTGTTGG TACAGAAATTGGTCAAGGTTTACAATGGGCATGATTGTTGG < 41bp 0.443418542598515 0.832612276913868 0.3046171 0.3289395 prediction 0.665224553827736 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79698450 chrX:79698451 nonsynonymous SNV 0.477 1 22 hPsi_associated_SNPs_26216 0 0 0 0 0 unknown 0.43871859188407 0.438718592994987 0 0 hPsi_site_19940 iPseU_CNN:0;iRNA_PseU:0 19941 chr1 151079611 151079611 1 + G A SKCM 151079610 + 151079590 151079630 41 GTCATCACCATAGTGACTGATGGAGTCCCTCTGGGTAATAT GTCATCACCATAGTGACTGATAGAGTCCCTCTGGGTAATAT < 41bp 0.416151787855236 0.832611251895835 0.48967192 0.65625393 prediction 0.665222503791669 Functional Gain - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151079610 chr1:151079611 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26217 0 0 1 0 2 chromatin 0.438718350131099 0.438718932556839 0.31250786 0 hPsi_site_19941 iPseU_CNN:0.31250786;iRNA_PseU:0 19942 chr7 143771567 143771567 1 + G A PRAD 143771566 + 143771546 143771586 41 CCAGATGCTGGTGAACCTCCTGCATCCAGCCAAGCCCATCT CCAGATGCTGGTGAACCTCCTACATCCAGCCAAGCCCATCT < 41bp 0.555199068580744 0.887803076533643 0.19542402 0.32463145 prediction 0.665208015905798 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771566 chr7:143771567 synonymous SNV . 0 22 hPsi_associated_SNPs_26218 0 0 0 0 0 unknown 0.439221249659251 0.438478447619428 0 0 hPsi_site_19942 iPseU_CNN:0;iRNA_PseU:0 19943 chr5 137710883 137710883 1 + G A UCEC 137710882 + 137710862 137710902 41 CCTGTCAGATGCCAATGGGTTGCATCTGTTTCAGGTATTTA CCTGTCAGATGCCAATGGGTTACATCTGTTTCAGGTATTTA < 41bp 0.424665936136264 0.832603800300961 0.2603373 0.47130907 prediction 0.665207600601922 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137710882 chr5:137710883 synonymous SNV . 0 22 hPsi_associated_SNPs_26219 0 0 1 0 1 Nucleus 0.438718591619244 0.438717124355336 0 0 hPsi_site_19943 iPseU_CNN:0;iRNA_PseU:0 19944 chr5 182218 182218 1 + C A COAD 182217 + 182197 182237 41 CAGACAGCAGCACCTCCTCTTCTAGCAGCCAGTCCTCCTCC CAGACAGCAGCACCTCCTCTTATAGCAGCCAGTCCTCCTCC < 41bp 0.491128474399759 0.83260248886061 0.41547686 0.51096994 prediction 0.66520497772122 Functional Gain - PLEKHG4B ENSG00000153404 CDS Human protein_coding chr5:182217 chr5:182218 nonsynonymous SNV 0.710 3 22 hPsi_associated_SNPs_26220 0 0 0 0 0 exosome 0.438624550637793 0.43872730206822 0.0219398799999999 0 hPsi_site_19944 iPseU_CNN:0.0219398799999999;iRNA_PseU:0 19945 chr16 23226426 23226426 1 + C A HNSC 23226425 + 23226405 23226445 41 TGCAGATTGAGATGCTTCTGTCCAACTTCGGTGGCCAGCTG TGCAGATTGAGATGCTTCTGTACAACTTCGGTGGCCAGCTG < 41bp 0.483844793702471 0.832600835743307 0.40037924 0.69144034 prediction 0.665201671486614 Functional Gain - SCNN1G ENSG00000166828 CDS Human protein_coding chr16:23226425 chr16:23226426 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26221 0 0 1 0 1 exosome 0.438717276957728 0.438433777754339 0.38288068 0 hPsi_site_19945 iPseU_CNN:0.38288068;iRNA_PseU:0 19946 chr5 65344558 65344558 1 + G A STAD 65344557 + 65344537 65344577 41 GAGATGCGACCACCATTAATTGAAACCTCTATTAACCAGCC GAGATGCGACCACCATTAATTAAAACCTCTATTAACCAGCC < 41bp 0.44076515695605 0.832586212266233 0.28652972 0.417714 prediction 0.665172424532466 Functional Gain - ERBIN ENSG00000112851 CDS Human protein_coding chr5:65344557 chr5:65344558 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_26222 0 0 1 0 2 Nucleus 0.438718608856301 0.438718593103576 0 0 hPsi_site_19946 iPseU_CNN:0;iRNA_PseU:0 19947 chr6 27806819 27806819 1 + G A BLCA 27806818 + 27806798 27806838 41 CCAAGTACACCAGTTCCAAGTGAGCCCGCCCACCGCGGAAC CCAAGTACACCAGTTCCAAGTAAGCCCGCCCACCGCGGAAC < 41bp 0.529615938256924 0.862199771434821 0.13708615 0.34284613 prediction 0.665167666355795 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806818 chr6:27806819 synonymous SNV . 0 22 hPsi_associated_SNPs_26223 0 0 1 0 1 Ribosome 0.438460332572913 0.418761801682269 0 0 hPsi_site_19947 iPseU_CNN:0;iRNA_PseU:0 19948 chr22 18642975 18642975 1 + G A UCEC 18642974 + 18642954 18642994 41 ACAACATTGGACAGACCTGCTGCCTTAACTCCTTGATTCAG ACAACATTGGACAGACCTGCTACCTTAACTCCTTGATTCAG < 41bp 0.418775591735422 0.832581822369184 0.19802153 0.62234676 prediction 0.665163644738368 Functional Gain - USP18 ENSG00000184979 CDS Human protein_coding chr22:18642974 chr22:18642975 nonsynonymous SNV 0.973 3 22 hPsi_associated_SNPs_26224 0 0 0 0 2 Ribosome 0.43870161652532 0.438584988607527 0.24469352 0 hPsi_site_19948 iPseU_CNN:0.24469352;iRNA_PseU:0 19949 chrX 149013412 149013412 1 + C A UCEC 149013411 + 149013391 149013431 41 AGTGGCTGAGTTAGTTCGTTTCCTGCTCCGCAAATATCAAA AGTGGCTGAGTTAGTTCGTTTACTGCTCCGCAAATATCAAA < 41bp 0.52418030700416 0.856755275663225 0.2719283 0.6125927 prediction 0.66514993731813 Functional Gain - MAGEA8 ENSG00000156009 CDS Human protein_coding chrX:149013411 chrX:149013412 nonsynonymous SNV 0.067 0 22 hPsi_associated_SNPs_26225 0 0 0 0 0 exosome 0.43874322720482 0.438793397675528 0.2251854 0 hPsi_site_19949 iPseU_CNN:0.2251854;iRNA_PseU:0 19950 chr1 22418721 22418721 1 + G A rs1803269 22418720 + 22418700 22418740 41 AAAGTGGGTGGAGCCCATCTTGCCCCTCCTCTTTTCTAGGA AAAGTGGGTGGAGCCCATCTTACCCCTCCTCTTTTCTAGGA < 41bp 0.537084908286688 0.869650574626011 0.27011514 0.48592162 prediction 0.665131332678645 Functional Gain - CDC42 ENSG00000070831 UTR3 Human protein_coding chr1:22418720 chr1:22418721 . . 0 22 hPsi_associated_SNPs_26226 0 0 1 1 0 Ribosome 0.438718652640222 0.438776329130402 0 0 hPsi_site_19950 iPseU_CNN:0;iRNA_PseU:0 19951 chr12 55615577 55615577 1 + C A LUAD 55615576 + 55615556 55615596 41 CTCTTCTACGGAACAGCCAGTCTGACCTACCTGCGGCCCAA CTCTTCTACGGAACAGCCAGTATGACCTACCTGCGGCCCAA < 41bp 0.503686800943163 0.836251109150328 0.31552002 0.3646118 prediction 0.665128616414329 Functional Gain - OR10A7 ENSG00000179919 CDS Human protein_coding chr12:55615576 chr12:55615577 nonsynonymous SNV 0.848 0 22 hPsi_associated_SNPs_26227 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0 0 hPsi_site_19951 iPseU_CNN:0;iRNA_PseU:0 19952 chr16 22122251 22122251 1 + G A STAD 22122250 + 22122230 22122270 41 AGCCACAAGGAGAAGCTGTTTGTCCTGTCCTTTGGCACCAA AGCCACAAGGAGAAGCTGTTTATCCTGTCCTTTGGCACCAA < 41bp 0.569854992381406 0.902409271636763 0.29181385 0.27981573 prediction 0.665108558510714 Functional Gain - VWA3A ENSG00000175267 CDS Human protein_coding chr16:22122250 chr16:22122251 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_26228 0 0 0 0 2 Endoplasmic reticulum 0.438718598051706 0.438718841270196 0 0 hPsi_site_19952 iPseU_CNN:0;iRNA_PseU:0 19953 chr21 37785272 37785272 1 + G A SKCM 37785271 + 37785251 37785291 41 AGATGAACTTGGAATTCCTTTGAAAGAGAAGCCAGTTTTGA AGATGAACTTGGAATTCCTTTAAAAGAGAAGCCAGTTTTGA < 41bp 0.440005828367752 0.832547956359579 0.36227235 0.43896425 prediction 0.665095912719158 Functional Gain - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785271 chr21:37785272 synonymous SNV . 0 22 hPsi_associated_SNPs_26229 0 0 1 0 1 Ribosome 0.438718592995701 0.438718127926668 0 0 hPsi_site_19953 iPseU_CNN:0;iRNA_PseU:0 19954 chr1 231396309 231396309 1 + C A UCEC 231396308 + 231396288 231396328 41 CCGAGAGGAAGTGAGTGAGATCTTAGATGAAATGAGTCACA CCGAGAGGAAGTGAGTGAGATATTAGATGAAATGAGTCACA < 41bp 0.520109943108276 0.85265526835482 0.30371314 0.43048227 prediction 0.665090650493087 Functional Gain - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231396308 chr1:231396309 synonymous SNV . 0 22 hPsi_associated_SNPs_26230 0 0 1 0 1 Cytosol 0.438576532413634 0.438599897630651 0 0 hPsi_site_19954 iPseU_CNN:0;iRNA_PseU:0 19955 chrX 153171588 153171588 1 + G A UCEC 153171587 + 153171567 153171607 41 CGCACCTATGTCACCTGGATTGCCCTGATGGTGTTCGTGGC CGCACCTATGTCACCTGGATTACCCTGATGGTGTTCGTGGC < 41bp 0.561564619310029 0.894108153593954 0.1541819 0.2470997 prediction 0.665087068567849 Functional Gain - AVPR2 ENSG00000126895 CDS Human protein_coding chrX:153171587 chrX:153171588 nonsynonymous SNV 0.933 0 22 hPsi_associated_SNPs_26231 0 0 0 0 0 exosome 0.438718594681254 0.438718592991767 0 0 hPsi_site_19955 iPseU_CNN:0;iRNA_PseU:0 19956 chr12 22214331 22214331 1 + C A UCEC 22214330 + 22214310 22214350 41 GAGACCAAAAAGAAATAATATCTTATGATGTAAAAGATGCT GAGACCAAAAAGAAATAATATATTATGATGTAAAAGATGCT < 41bp 0.502516355645658 0.835049430203211 0.27245444 0.294163 prediction 0.665066149115106 Functional Gain - CMAS ENSG00000111726 CDS Human protein_coding chr12:22214330 chr12:22214331 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26232 0 0 1 0 1 Ribosome 0.438771660152725 0.438598337785624 0 0 hPsi_site_19956 iPseU_CNN:0;iRNA_PseU:0 19957 chr11 89768529 89768529 1 + C A LUAD 89768528 + 89768508 89768548 41 GCAAGACATCCCATTTCTTGTCCAGTGCTCTGAATGCACAA GCAAGACATCCCATTTCTTGTACAGTGCTCTGAATGCACAA < 41bp 0.522586138414292 0.855116905789028 0.33748952 0.69753706 prediction 0.665061534749473 Functional Gain - TRIM49C ENSG00000204449 CDS Human protein_coding chr11:89768528 chr11:89768529 synonymous SNV . 0 22 hPsi_associated_SNPs_26233 0 0 0 0 0 unknown 0.43871859300122 0.438672985356948 0.39507412 0 hPsi_site_19957 iPseU_CNN:0.39507412;iRNA_PseU:0 19958 chr14 29237816 29237816 1 + C A LUSC 29237815 + 29237795 29237835 41 GGGCCGCGTCCTCCTCCACGTCGCCGCAGGCCCCCTCGACC GGGCCGCGTCCTCCTCCACGTAGCCGCAGGCCCCCTCGACC < 41bp 0.528522620714767 0.861048361415549 0.18801433 0.6382528 prediction 0.665051481401564 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237815 chr14:29237816 stopgain 0.998 0 22 hPsi_associated_SNPs_26234 0 0 1 0 0 Cytosol 0.440609562161142 0.438713859347962 0.2765056 0 hPsi_site_19958 iPseU_CNN:0.2765056;iRNA_PseU:0 19959 chr1 16056295 16056295 1 + C A BLCA 16056294 + 16056274 16056314 41 ACCTCACTCCCTATGCAGGTTCTTTTTGGCTTCTTTGAAGT ACCTCACTCCCTATGCAGGTTATTTTTGGCTTCTTTGAAGT < 41bp 0.51813622121986 0.850660982682958 0.621649 0.6790958 prediction 0.665049522926196 Functional Gain - PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16056294 chr1:16056295 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_26235 0 0 0 0 1 chromatin 0.438718594041152 0.438718592266771 0.1148936 0 hPsi_site_19959 iPseU_CNN:0.1148936;iRNA_PseU:0 19960 chr22 30642791 30642791 1 + G A UCEC 30642790 + 30642770 30642810 41 GATTTATATACTGGAGCCTGTGTTGTAAGACAGAAACAGCT GATTTATATACTGGAGCCTGTATTGTAAGACAGAAACAGCT < 41bp 0.464806948677331 0.832524228561647 0.27871382 0.6205169 prediction 0.665048457123294 Functional Gain - LIF ENSG00000268812 ncRNA_exonic Human antisense chr22:30642790 chr22:30642791 . . 0 22 hPsi_associated_SNPs_26236 0 0 0 0 0 exosome 0.438718560298338 0.438718600700702 0.2410338 0 hPsi_site_19960 iPseU_CNN:0.2410338;iRNA_PseU:0 19961 chr9 131584852 131584852 1 + C T COAD 131584853 - 131584833 131584873 41 GTGATGGCCTTGAGGCTGCCTGCCCGCGCCAGGATGTTTGG GTGATGGCCTTGAGGCTGCCTACCCGCGCCAGGATGTTTGG < 41bp 0.553549108860052 0.886070057936133 0.15155831 0.26854607 prediction 0.665041898152161 Functional Gain - ENDOG ENSG00000167136 CDS Human protein_coding chr9:131584853 chr9:131584852 nonsynonymous SNV 0.498 1 22 hPsi_associated_SNPs_26237 0 0 1 0 0 Cytosol 0.438717709803254 0.438714248046867 0 0 hPsi_site_19961 iPseU_CNN:0;iRNA_PseU:0 19962 chr22 36122301 36122301 1 + G A BLCA 36122300 + 36122280 36122320 41 GAGTTGGAAAATTAACAATTTGATGTCAACTGTCCACAGTG GAGTTGGAAAATTAACAATTTAATGTCAACTGTCCACAGTG < 41bp 0.438701172478919 0.832519551306538 0.2277968 0.4527579 prediction 0.665039102613076 Functional Gain - APOL5 ENSG00000128313 CDS Human protein_coding chr22:36122300 chr22:36122301 synonymous SNV . 0 22 hPsi_associated_SNPs_26238 0 0 0 0 1 unknown 0.438681863669591 0.438715866476041 0 0 hPsi_site_19962 iPseU_CNN:0;iRNA_PseU:0 19963 chr5 72419607 72419607 1 + G A LUSC 72419606 + 72419586 72419626 41 TGGGCATTTGGGTCCCTGGATGTGGCTCCAACTGGGCGCAG TGGGCATTTGGGTCCCTGGATATGGCTCCAACTGGGCGCAG < 41bp 0.57105003733141 0.90356891246666 0.5271729 0.8297442 prediction 0.6650377502705 Functional Gain - TMEM171 ENSG00000157111 CDS Human protein_coding chr5:72419606 chr5:72419607 nonsynonymous SNV 0.663 4 22 hPsi_associated_SNPs_26239 0 0 0 0 0 Ribosome 0.438718581711028 0.438718605096254 0.6051426 0 hPsi_site_19963 iPseU_CNN:0.6051426;iRNA_PseU:0 19964 chr19 1299833 1299833 1 + G A STAD 1299832 + 1299812 1299852 41 GCCACCCGCAGACGAGACCCTGTACGAGGCTCCTGAGCCCA GCCACCCGCAGACGAGACCCTATACGAGGCTCCTGAGCCCA < 41bp 0.427571206409997 0.832516069145697 0.32291812 0.55520743 prediction 0.665032138291395 Functional Gain - EFNA2 ENSG00000099617 CDS Human protein_coding chr19:1299832 chr19:1299833 synonymous SNV . 0 22 hPsi_associated_SNPs_26240 0 0 1 0 1 exosome 0.438720029567894 0.438718190422635 0.11041486 0 hPsi_site_19964 iPseU_CNN:0.11041486;iRNA_PseU:0 19965 chr4 100872785 100872785 1 + G A rs527904627 100872784 + 100872764 100872804 41 GACCAGCCTGGCCAACATGGTGACACCCCATCTCTACTAAA GACCAGCCTGGCCAACATGGTAACACCCCATCTCTACTAAA < 41bp 0.478179314101302 0.832506892478632 0.22538543 0.76322895 prediction 0.665013784957263 Functional Gain - LOC256880 ENSG00000245322 ncRNA_intronic Human antisense chr4:100872784 chr4:100872785 . . 0 22 hPsi_associated_SNPs_26241 0 0 0 0 0 unknown 0.438891019429994 0.438719099504763 0.5264579 0 hPsi_site_19965 iPseU_CNN:0.5264579;iRNA_PseU:0 19966 chr1 212799052 212799052 1 + C T UCEC 212799053 - 212799033 212799073 41 GCAGCTGCCCCTGCTGCTGCTGCCTCTTTAATCCCCCCTGT GCAGCTGCCCCTGCTGCTGCTACCTCTTTAATCCCCCCTGT < 41bp 0.45685804006887 0.832505356296893 0.4424666 0.70170873 prediction 0.665010712593786 Functional Gain - FAM71A ENSG00000162771 CDS Human protein_coding chr1:212799053 chr1:212799052 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_26242 0 0 0 0 0 exosome 0.438718656391276 0.438718826127238 0.40341746 0 hPsi_site_19966 iPseU_CNN:0.40341746;iRNA_PseU:0 19967 chr1 2408075 2408075 1 + G A SKCM 2408074 + 2408054 2408094 41 CAGCCGGACCAAGGGAACGGTGGCCTGGCTGGCGGAGGTAC CAGCCGGACCAAGGGAACGGTAGCCTGGCTGGCGGAGGTAC < 41bp 0.455825319372667 0.832493794269511 0.30589175 0.52178913 prediction 0.664987588539022 Functional Gain - PLCH2 ENSG00000149527 CDS Human protein_coding chr1:2408074 chr1:2408075 synonymous SNV . 0 22 hPsi_associated_SNPs_26243 0 0 0 0 1 nucleus 0.438721004929751 0.43871946793067 0.0435782600000001 0 hPsi_site_19967 iPseU_CNN:0.0435782600000001;iRNA_PseU:0 19968 chr11 18195142 18195142 1 + G A BLCA 18195141 + 18195121 18195161 41 CTTTACAGGCCTGAGTATGCTGAGCGCCATCAGCACCGAGC CTTTACAGGCCTGAGTATGCTAAGCGCCATCAGCACCGAGC < 41bp 0.557797547372424 0.890291310915999 0.24829343 0.52060294 prediction 0.664987527087151 Functional Gain - MRGPRX4 ENSG00000179817 CDS Human protein_coding chr11:18195141 chr11:18195142 synonymous SNV . 0 22 hPsi_associated_SNPs_26244 0 0 0 0 0 unknown 0.438632558900456 0.438740324118111 0.0412058799999999 0 hPsi_site_19968 iPseU_CNN:0.0412058799999999;iRNA_PseU:0 19969 chr9 96214614 96214614 1 + G A STAD 96214613 + 96214593 96214633 41 GCCGCCAAAGGTCTGGTTCCTGCCGCCCGTCTGCATGGCCC GCCGCCAAAGGTCTGGTTCCTACCGCCCGTCTGCATGGCCC < 41bp 0.439087312198514 0.832492810329498 0.29327303 0.77590656 prediction 0.664985620658996 Functional Gain - FAM120A;FAM120AOS ENSG00000048828;ENSG00000188938 CDS Human other chr9:96214613 chr9:96214614 synonymous SNV . 0 22 hPsi_associated_SNPs_26245 0 0 0 0 1 unknown 0.438718609676947 0.438947748946426 0.55181312 0 hPsi_site_19969 iPseU_CNN:0.55181312;iRNA_PseU:0 19970 chr19 47856872 47856872 1 + G A UCEC 47856871 + 47856851 47856891 41 CTGTGGCAAGTCCACTCAGGTGCCCCAGTACCTGCTGGCTG CTGTGGCAAGTCCACTCAGGTACCCCAGTACCTGCTGGCTG < 41bp 0.531148864741673 0.8636371490047 0.2745086 0.7293359 prediction 0.664976568526053 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856871 chr19:47856872 synonymous SNV . 0 22 hPsi_associated_SNPs_26246 0 0 1 0 0 Ribosome 0.439388832425299 0.439098922143713 0.4586718 0 hPsi_site_19970 iPseU_CNN:0.4586718;iRNA_PseU:0 19971 chr12 70824427 70824427 1 + C A COAD 70824426 + 70824406 70824446 41 AGCCATGAAGAAGCGCAAGTTCTCTTAAAGGGGAAGGAGGC AGCCATGAAGAAGCGCAAGTTATCTTAAAGGGGAAGGAGGC < 41bp 0.504551662851444 0.837037290185658 0.5209836 0.68157 prediction 0.664971254668429 Functional Gain - KCNMB4 ENSG00000135643 CDS Human protein_coding chr12:70824426 chr12:70824427 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26247 0 0 1 0 0 Cytosol 0.438718593000627 0.43871859383537 0.3211728 0 hPsi_site_19971 iPseU_CNN:0.3211728;iRNA_PseU:0 19972 chr9 135458478 135458478 1 + C A LUAD 135458477 + 135458457 135458497 41 CGTCACCTCCTCCTTTCTGATCAGGGACATCCTTGCCGACT CGTCACCTCCTCCTTTCTGATAAGGGACATCCTTGCCGACT < 41bp 0.478597054523882 0.832484453471971 0.32953146 0.67712855 prediction 0.664968906943942 Functional Gain - BARHL1 ENSG00000125492 CDS Human protein_coding chr9:135458477 chr9:135458478 synonymous SNV . 0 22 hPsi_associated_SNPs_26248 0 0 0 0 0 unknown 0.438717010875726 0.438718017930676 0.3542571 0 hPsi_site_19972 iPseU_CNN:0.3542571;iRNA_PseU:0 19973 chr6 28057006 28057006 1 + G A LIHC 28057005 + 28056985 28057025 41 CCCTTTGGTTGCAAAGAATGTGGGAGAGCATTCAACCTGAA CCCTTTGGTTGCAAAGAATGTAGGAGAGCATTCAACCTGAA < 41bp 0.425753796884552 0.832482376366965 0.28202787 0.7594653 prediction 0.664964752733931 Functional Gain - ZNF165 ENSG00000197279 CDS Human protein_coding chr6:28057005 chr6:28057006 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26249 0 0 0 0 0 Endoplasmic reticulum 0.438718592995102 0.438719033759117 0.5189306 0 hPsi_site_19973 iPseU_CNN:0.5189306;iRNA_PseU:0 19974 chr17 77897065 77897065 1 + G A rs138316690 77897064 + 77897044 77897084 41 AGAAGCTGGGATTACAGTTGTGTGTCACCACGCCTGGCTAA AGAAGCTGGGATTACAGTTGTATGTCACCACGCCTGGCTAA < 41bp 0.527374416258329 0.859854322268116 0.24318302 0.25976536 prediction 0.664959812019574 Functional Gain - LINC01978 ENSG00000262188 ncRNA_exonic Human lincRNA chr17:77897064 chr17:77897065 . . 0 22 hPsi_associated_SNPs_26250 0 0 0 0 0 unknown 0.436664896470278 0.438648658835307 0 0 hPsi_site_19974 iPseU_CNN:0;iRNA_PseU:0 19975 chr4 998096 998096 1 + G A COAD 998095 + 998075 998115 41 GAGTTCGAGCCCTGGACTACTGGGCCCGACCAGGCCCCTTC GAGTTCGAGCCCTGGACTACTAGGCCCGACCAGGCCCCTTC < 41bp 0.432627906533925 0.832472425800459 0.14171427 0.24072191 prediction 0.664944851600918 Functional Gain - IDUA ENSG00000127415 CDS Human protein_coding chr4:998095 chr4:998096 stopgain 1.000 1 22 hPsi_associated_SNPs_26251 0 0 0 0 1 chromatin 0.438717111574885 0.438816468359895 0 0 hPsi_site_19975 iPseU_CNN:0;iRNA_PseU:0 19976 chr2 68882188 68882188 1 + G A DLBC 68882187 + 68882167 68882207 41 AGATCTTCTGCGGCCAGATCTGGCCTGTGGACCAGCAGCTC AGATCTTCTGCGGCCAGATCTAGCCTGTGGACCAGCAGCTC < 41bp 0.566420146187308 0.898883267937893 0.226069 0.37805837 prediction 0.66492624350117 Functional Gain - PROKR1 ENSG00000169618 CDS Human protein_coding chr2:68882187 chr2:68882188 stopgain 0.994 1 22 hPsi_associated_SNPs_26252 0 0 0 0 0 exosome 0.438872268130592 0.438718248416688 0 0 hPsi_site_19976 iPseU_CNN:0;iRNA_PseU:0 19977 chr19 50436371 50436371 1 + G A rs8667 50436370 + 50436350 50436390 41 AAGGGCAGGGGTGTGGCTTCTGGGGGCTGGTCTTCAGCTCT AAGGGCAGGGGTGTGGCTTCTAGGGGCTGGTCTTCAGCTCT < 41bp 0.450021013341081 0.832460548870304 0.22530979 0.37012655 prediction 0.664921097740607 Functional Gain - MIR4751 ENSG00000265438 ncRNA_exonic Human other chr19:50436370 chr19:50436371 . . 0 22 hPsi_associated_SNPs_26253 0 0 1 0 0 unknown 0.438718596355164 0.438718356544586 0 0 hPsi_site_19977 iPseU_CNN:0;iRNA_PseU:0 19978 chr12 6974347 6974347 1 + C A UCEC 6974346 + 6974326 6974366 41 AGAGTATCAGCTCTTTGCCTTCATTAGTCACATGGGCACCT AGAGTATCAGCTCTTTGCCTTAATTAGTCACATGGGCACCT < 41bp 0.524379006685028 0.856838232231293 0.54048806 0.68602747 prediction 0.66491845109253 Functional Gain - USP5 ENSG00000111667 CDS Human protein_coding chr12:6974346 chr12:6974347 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26254 0 0 1 0 1 Nucleus 0.43869739227282 0.438686482376447 0.29107882 0 hPsi_site_19978 iPseU_CNN:0.29107882;iRNA_PseU:0 19979 chr17 42226223 42226223 1 + C A UCEC 42226222 + 42226202 42226242 41 CTCCAGTGTCTTCCATTGGGTCTCCTGTTGGTACCCCAAAA CTCCAGTGTCTTCCATTGGGTATCCTGTTGGTACCCCAAAA < 41bp 0.475342825392648 0.832458511818002 0.16949132 0.30722284 prediction 0.664917023636004 Functional Gain - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42226222 chr17:42226223 nonsynonymous SNV 0.028 2 22 hPsi_associated_SNPs_26255 0 0 1 0 0 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_19979 iPseU_CNN:0;iRNA_PseU:0 19980 chr17 34171540 34171540 1 + G A LUAD 34171539 + 34171519 34171559 41 AGAGGTCGTGGGGGCAGAGGTGGAGACCGAGGCGGCTATGG AGAGGTCGTGGGGGCAGAGGTAGAGACCGAGGCGGCTATGG < 41bp 0.5718691410099 0.90432673580702 0.39885134 0.54387116 prediction 0.66491518959424 Functional Gain - TAF15 ENSG00000172660 CDS Human other chr17:34171539 chr17:34171540 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26256 0 0 1 0 1 Cytosol 0.438718607613438 0.438718592995172 0.08774232 0 hPsi_site_19980 iPseU_CNN:0.08774232;iRNA_PseU:0 19981 chr3 130368222 130368222 1 + C A SKCM 130368221 + 130368201 130368241 41 GCAGAGCAATGCGGTTTATTTCCAGGAATGTCTTCAAGCGG GCAGAGCAATGCGGTTTATTTACAGGAATGTCTTCAAGCGG < 41bp 0.482794127197136 0.832455606417696 0.2869948 0.38312444 prediction 0.664911212835392 Functional Gain - COL6A6 ENSG00000206384 CDS Human protein_coding chr3:130368221 chr3:130368222 nonsynonymous SNV 0.889 3 22 hPsi_associated_SNPs_26257 0 0 0 0 0 exosome 0.438718592995102 0.438718592991538 0 0 hPsi_site_19981 iPseU_CNN:0;iRNA_PseU:0 19982 chr9 137982144 137982144 1 + G A STAD 137982143 + 137982123 137982163 41 TCGCTCCACAGCAGACCATGTGTTCACGGGATGCCCGCACA TCGCTCCACAGCAGACCATGTATTCACGGGATGCCCGCACA < 41bp 0.432646664198525 0.832451474726289 0.33309788 0.7035389 prediction 0.664902949452578 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137982143 chr9:137982144 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26258 0 0 0 0 1 Endoplasmic reticulum 0.442046921657551 0.439641451224099 0.4070778 0 hPsi_site_19982 iPseU_CNN:0.4070778;iRNA_PseU:0 19983 chr1 44437875 44437875 1 + G T THCA 44437874 + 44437854 44437894 41 CACCACCTGAGTCAGAGCTGTGGGAAACCCCAGACGTGTCA CACCACCTGAGTCAGAGCTGTTGGAAACCCCAGACGTGTCA < 41bp 0.498197453070303 0.832451090276688 0.33428645 0.45769984 prediction 0.664902180553375 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437874 chr1:44437875 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_26259 0 0 1 0 1 nucleolus 0.438678612336524 0.429669746685475 0 0 hPsi_site_19983 iPseU_CNN:0;iRNA_PseU:0 19984 chr20 31611164 31611164 1 + C A UCEC 31611163 + 31611143 31611183 41 TTCAGGGCTACGTGGTGATATCCAGTGGACTCTTCTACCAG TTCAGGGCTACGTGGTGATATACAGTGGACTCTTCTACCAG < 41bp 0.513425583764394 0.845875305241813 0.45729727 0.65237594 prediction 0.664899442954839 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31611163 chr20:31611164 nonsynonymous SNV 0.452 3 22 hPsi_associated_SNPs_26260 0 0 1 0 1 cytosol 0.438718592995102 0.438718592995098 0.30475188 0 hPsi_site_19984 iPseU_CNN:0.30475188;iRNA_PseU:0 19985 chr16 772362 772362 1 + G A ESCA 772361 + 772341 772381 41 GCTGCCTGCTGGGGCCCGCGTGGTGTCTGGGCGCTTCCCAC GCTGCCTGCTGGGGCCCGCGTAGTGTCTGGGCGCTTCCCAC < 41bp 0.553287193966288 0.885732148822934 0.30742833 0.5807186 prediction 0.664889909713292 Functional Gain - FAM173A ENSG00000103254 CDS Human protein_coding chr16:772361 chr16:772362 synonymous SNV . 0 22 hPsi_associated_SNPs_26261 0 0 1 0 1 Ribosome 0.438745093882206 0.438706336827224 0.1614372 0 hPsi_site_19985 iPseU_CNN:0.1614372;iRNA_PseU:0 19986 chr11 63996776 63996776 1 + G A BLCA 63996775 + 63996755 63996795 41 CTGTTGGGCATCGCCCGAAATGAGACCAGTGCTGGCCGAGC CTGTTGGGCATCGCCCGAAATAAGACCAGTGCTGGCCGAGC < 41bp 0.415343995302519 0.832438134692035 0.22793889 0.36628437 prediction 0.664876269384071 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63996775 chr11:63996776 nonsynonymous SNV 0.943 1 22 hPsi_associated_SNPs_26262 0 0 1 0 2 Ribosome 0.438718556619033 0.438718592995102 0 0 hPsi_site_19986 iPseU_CNN:0;iRNA_PseU:0 19987 chr19 58367565 58367565 1 + G A STAD 58367564 + 58367544 58367584 41 CAGAGGTGCTTGTACCGTGATGTGATGCTAGAGAACCTGGC CAGAGGTGCTTGTACCGTGATATGATGCTAGAGAACCTGGC < 41bp 0.419075650399517 0.832431077379639 0.33307645 0.49089447 prediction 0.664862154759277 Functional Gain - ZNF587 ENSG00000198466;ENSG00000268750 CDS Human other chr19:58367564 chr19:58367565 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_26263 0 0 0 0 3 Nucleus 0.43871838926485 0.438717148857391 0 0 hPsi_site_19987 iPseU_CNN:0;iRNA_PseU:0 19988 chr12 6646788 6646788 1 + G A rs541601360 6646787 + 6646767 6646807 41 CACTGCCACCCAGAAGACTGTGGATGGCCCCTCCGGGAAAC CACTGCCACCCAGAAGACTGTAGATGGCCCCTCCGGGAAAC < 41bp 0.572625481679705 0.90505647018018 0.30124116 0.711095 prediction 0.66486197700095 Functional Gain - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646787 chr12:6646788 synonymous SNV . 0 22 hPsi_associated_SNPs_26264 0 0 1 0 1 Ribosome 0.43871861239107 0.438718595345422 0.42219 0 hPsi_site_19988 iPseU_CNN:0.42219;iRNA_PseU:0 19989 chr1 202163309 202163309 1 + G A SKCM 202163308 + 202163288 202163328 41 GTCCGCCGTTCCGGGGGACCTGGACCCCCTGACGGCTTACC GTCCGCCGTTCCGGGGGACCTAGACCCCCTGACGGCTTACC < 41bp 0.438821402434409 0.83242882417709 0.2340934 0.37376648 prediction 0.664857648354179 Functional Gain - LGR6 ENSG00000133067 CDS Human protein_coding chr1:202163308 chr1:202163309 synonymous SNV . 0 22 hPsi_associated_SNPs_26265 0 0 0 0 1 nucleoplasm 0.438718631073923 0.438718592994234 0 0 hPsi_site_19989 iPseU_CNN:0;iRNA_PseU:0 19990 chr17 35297683 35297683 1 + C A READ 35297682 + 35297662 35297702 41 AGTGTTTCACCTGAACTGCTTCACCTGCATGATGTGTAACA AGTGTTTCACCTGAACTGCTTAACCTGCATGATGTGTAACA < 41bp 0.474056351665368 0.832425704254441 0.32104903 0.45918003 prediction 0.664851408508881 Functional Gain - LHX1 ENSG00000132130 CDS Human other chr17:35297682 chr17:35297683 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26266 0 0 0 0 1 exosome 0.436726381965977 0.438799235409899 0 0 hPsi_site_19990 iPseU_CNN:0;iRNA_PseU:0 19991 chrX 151818236 151818236 1 + C A UCEC 151818235 + 151818215 151818255 41 GGTTGAAGACATCATATTATTCTGGGATGACAATGGGAACG GGTTGAAGACATCATATTATTATGGGATGACAATGGGAACG < 41bp 0.469544665728297 0.832418634923719 0.280191 0.35067573 prediction 0.664837269847438 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151818235 chrX:151818236 nonsynonymous SNV 0.946 0 22 hPsi_associated_SNPs_26267 0 0 0 0 1 chromatin 0.43872148181888 0.438718873724034 0 0 hPsi_site_19991 iPseU_CNN:0;iRNA_PseU:0 19992 chr19 52942001 52942001 1 + C A UCEC 52942000 + 52941980 52942020 41 TCAGATCTCACTGCCCATCTTCTAATCCATACTGGAGAGAA TCAGATCTCACTGCCCATCTTATAATCCATACTGGAGAGAA < 41bp 0.508824313972641 0.841241559995529 0.3450943 0.52789325 prediction 0.664834492045775 Functional Gain - ZNF534 ENSG00000198633 CDS Human protein_coding chr19:52942000 chr19:52942001 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26268 0 0 0 0 0 exosome 0.438718548680478 0.438718528640376 0.0557865 0 hPsi_site_19992 iPseU_CNN:0.0557865;iRNA_PseU:0 19993 chr9 140145761 140145761 1 + C T ACC 140145762 - 140145742 140145782 41 AAATTTGCCAGGAATTTCACTGCCTTCTGGTCAGAATTCAT AAATTTGCCAGGAATTTCACTACCTTCTGGTCAGAATTCAT < 41bp 0.442465489600918 0.832416691018539 0.27295744 0.4715692 prediction 0.664833382037078 Functional Gain - STPG3 ENSG00000197768 CDS Human protein_coding chr9:140145762 chr9:140145761 nonsynonymous SNV 0.934 3 22 hPsi_associated_SNPs_26269 0 0 0 0 1 chromatin 0.438714479444397 0.438584765753864 0 0 hPsi_site_19993 iPseU_CNN:0;iRNA_PseU:0 19994 chr1 898282 898282 1 + G A LIHC 898281 + 898261 898301 41 CGCTGCGAGGGGGCCGGGCCTGTGCTTTTTGCTGTGGGTAT CGCTGCGAGGGGGCCGGGCCTATGCTTTTTGCTGTGGGTAT < 41bp 0.437526540275302 0.832394707442225 0.41462076 0.5759047 prediction 0.664789414884449 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898281 chr1:898282 nonsynonymous SNV 0.845 2 22 hPsi_associated_SNPs_26270 0 0 1 0 1 Cytosol 0.43871859384453 0.438718593687686 0.1518094 0 hPsi_site_19994 iPseU_CNN:0.1518094;iRNA_PseU:0 19995 chr7 107557789 107557789 1 + G A LUAD 107557788 + 107557768 107557808 41 CAGAGGATGAAGGCATTATCTGTGTTGAAGGAATGGCTGGT CAGAGGATGAAGGCATTATCTATGTTGAAGGAATGGCTGGT < 41bp 0.42942668720191 0.832393817163141 0.24962488 0.25705573 prediction 0.664787634326283 Functional Gain - DLD ENSG00000091140 CDS Human protein_coding chr7:107557788 chr7:107557789 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26271 0 0 1 0 1 Cytosol 0.438815143335253 0.438919855691712 0 0 hPsi_site_19995 iPseU_CNN:0;iRNA_PseU:0 19996 chr11 88961040 88961040 1 + G A STAD 88961039 + 88961019 88961059 41 GGATGCCTCTCAAAGCAGCATGCACAATGCCTTGCACATCT GGATGCCTCTCAAAGCAGCATACACAATGCCTTGCACATCT < 41bp 0.428543870238551 0.832391390306782 0.19130275 0.3389881 prediction 0.664782780613564 Functional Gain - TYR ENSG00000077498 CDS Human protein_coding chr11:88961039 chr11:88961040 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26272 0 0 0 0 2 unknown 0.43847433110325 0.438688108566003 0 0 hPsi_site_19996 iPseU_CNN:0;iRNA_PseU:0 19997 chr22 30415971 30415971 1 + C A OV 30415970 + 30415950 30415990 41 CAGCAGAGTGGGCTCAGTGTTCTCCTCAGTTCTCTCCAGGT CAGCAGAGTGGGCTCAGTGTTATCCTCAGTTCTCTCCAGGT < 41bp 0.471405934130275 0.832388372555107 0.54738617 0.88855267 prediction 0.664776745110214 Functional Gain - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30415970 chr22:30415971 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_26273 0 0 1 0 0 Ribosome 0.438710469899133 0.438421097387588 0.682333 0 hPsi_site_19997 iPseU_CNN:0.682333;iRNA_PseU:0 19998 chr15 22925869 22925869 1 + C A rs114789881 22925868 + 22925848 22925888 41 GCCCGACCAGCAGCCCTGCATCGAGCCCCCGCCATCCTCGC GCCCGACCAGCAGCCCTGCATAGAGCCCCCGCCATCCTCGC < 41bp 0.522892652822009 0.855277057076529 0.6393615 0.6607691 prediction 0.66476880850904 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22925868 chr15:22925869 synonymous SNV . 0 22 hPsi_associated_SNPs_26274 0 0 1 0 2 Cytosol 0.438719153467497 0.438718592995398 0.0428151999999999 0 hPsi_site_19998 iPseU_CNN:0.0428151999999999;iRNA_PseU:0 19999 chr10 71144578 71144578 1 + C A UCEC 71144577 + 71144557 71144597 41 TGATCACATTGTCTCCTGCATCTCTGACTTCTTGGACTACA TGATCACATTGTCTCCTGCATATCTGACTTCTTGGACTACA < 41bp 0.531499839094538 0.863882296057947 0.3404041 0.49188048 prediction 0.664764913926817 Functional Gain - HK1 ENSG00000156515 CDS Human protein_coding chr10:71144577 chr10:71144578 synonymous SNV . 0 22 hPsi_associated_SNPs_26275 0 0 1 0 2 chromatin 0.43872576897846 0.438600980828022 0 0 hPsi_site_19999 iPseU_CNN:0;iRNA_PseU:0 20000 chr7 141490923 141490923 1 + C A UCEC 141490922 + 141490902 141490942 41 TCCTCCTGATCTCACCAGTGTCTTCATCTGGGAGACACTCA TCCTCCTGATCTCACCAGTGTATTCATCTGGGAGACACTCA < 41bp 0.508885813641919 0.841263347938701 0.3108245 0.75569963 prediction 0.664755068593564 Functional Gain - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490922 chr7:141490923 synonymous SNV . 0 22 hPsi_associated_SNPs_26276 0 0 0 0 0 nucleolus 0.438719727682756 0.439114363513982 0.51139926 0 hPsi_site_20000 iPseU_CNN:0.51139926;iRNA_PseU:0 20001 chr19 42729279 42729279 1 + G A CESC 42729278 + 42729258 42729298 41 GAAGAGGACGATGAGGAGGATGAAGAAGATGATGAAGAGAT GAAGAGGACGATGAGGAGGATAAAGAAGATGATGAAGAGAT < 41bp 0.557992080615999 0.890364798132168 0.2978677 0.4126637 prediction 0.664745435032338 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729278 chr19:42729279 nonsynonymous SNV 0.517 0 22 hPsi_associated_SNPs_26277 0 0 1 0 0 Cytosol 0.438718592995792 0.438718592994258 0 0 hPsi_site_20001 iPseU_CNN:0;iRNA_PseU:0 20002 chr1 155007187 155007187 1 + C A UCEC 155007186 + 155007166 155007206 41 CGAAGAACAGAAGATTATGTTCTTGTACAGCTTGGTGGGTT CGAAGAACAGAAGATTATGTTATTGTACAGCTTGGTGGGTT < 41bp 0.51386202873753 0.846227372518907 0.36676258 0.44006115 prediction 0.664730687562753 Functional Gain - DCST1 ENSG00000163357 CDS Human protein_coding chr1:155007186 chr1:155007187 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_26278 0 0 0 0 2 nucleus 0.438730587672933 0.438719736309892 0 0 hPsi_site_20002 iPseU_CNN:0;iRNA_PseU:0 20003 chr6 139101113 139101113 1 + C A HNSC 139101112 + 139101092 139101132 41 GATTTCCACTCTGGAAAACTTCAAGCATTTGGTAAGCAATA GATTTCCACTCTGGAAAACTTAAAGCATTTGGTAAGCAATA < 41bp 0.504794540592848 0.837158130572155 0.25194 0.28371406 prediction 0.664727179958614 Functional Gain - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139101112 chr6:139101113 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_26279 0 0 1 0 1 Ribosome 0.438735264940382 0.437460777959313 0 0 hPsi_site_20003 iPseU_CNN:0;iRNA_PseU:0 20004 chr22 33198067 33198067 1 + C A CESC 33198066 + 33198046 33198086 41 GCGCCGAGGCGTGCACATGCTCGCCCAGCCACCCCCAGGAC GCGCCGAGGCGTGCACATGCTAGCCCAGCCACCCCCAGGAC < 41bp 0.482089338726097 0.832362867710946 0.29309773 0.7043879 prediction 0.664725735421893 Functional Gain - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33198066 chr22:33198067 stopgain 0.998 1 22 hPsi_associated_SNPs_26280 0 0 1 0 1 Ribosome 0.438356868728189 0.438706415766622 0.4087758 0 hPsi_site_20004 iPseU_CNN:0.4087758;iRNA_PseU:0 20005 chr19 59059491 59059491 1 + G A BLCA 59059490 + 59059470 59059510 41 CAGGAGCACATTCTGCGCTTTGCCTCTTGGGCTCTGGAGAG CAGGAGCACATTCTGCGCTTTACCTCTTGGGCTCTGGAGAG < 41bp 0.569962598013487 0.902324091737937 0.26405585 0.7081896 prediction 0.664722987448899 Functional Gain - TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59059490 chr19:59059491 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26281 0 0 1 0 2 Cytosol 0.438781122651021 0.438722680994083 0.4163792 0 hPsi_site_20005 iPseU_CNN:0.4163792;iRNA_PseU:0 20006 chr5 33937817 33937817 1 + C A LIHC 33937816 + 33937796 33937836 41 CGCCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCATCG CGCCCGGAGACTGTCGAAGGTAACCAAATCAGTGACCATCG < 41bp 0.521212106855465 0.853573008096841 0.20638159 0.48283952 prediction 0.664721802482751 Functional Gain - RXFP3 ENSG00000182631 CDS Human protein_coding chr5:33937816 chr5:33937817 synonymous SNV . 0 22 hPsi_associated_SNPs_26282 0 0 0 0 0 unknown 0.438718590936433 0.438720848492142 0 0 hPsi_site_20006 iPseU_CNN:0;iRNA_PseU:0 20007 chr11 8933129 8933129 1 + C A UCEC 8933128 + 8933108 8933148 41 GACTGGCATGCCCTGGAGCGTCCCAAAGGCTGCATGGGGGT GACTGGCATGCCCTGGAGCGTACCAAAGGCTGCATGGGGGT < 41bp 0.525657441573408 0.858014837656189 0.5946358 0.8915444 prediction 0.664714792165561 Functional Gain - AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8933128 chr11:8933129 nonsynonymous SNV 0.144 1 22 hPsi_associated_SNPs_26283 0 0 0 0 1 Ribosome 0.438718592174782 0.43871887683819 0.5938172 0 hPsi_site_20007 iPseU_CNN:0.5938172;iRNA_PseU:0 20008 chr16 70363761 70363761 1 + G A LUSC 70363760 + 70363740 70363780 41 GCCCAGGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTG GCCCAGGAACTGCCAGATGCTACTTTTCTCCGCCACCTTTG < 41bp 0.410450391857464 0.832356702705949 0.32671994 0.6320415 prediction 0.664713405411898 Functional Gain - DDX19B ENSG00000157349 CDS Human protein_coding chr16:70363760 chr16:70363761 synonymous SNV . 0 22 hPsi_associated_SNPs_26284 0 0 0 0 1 chromatin 0.438715303677897 0.438718590814843 0.264083 0 hPsi_site_20008 iPseU_CNN:0.264083;iRNA_PseU:0 20009 chr2 219099101 219099101 1 + C A UCEC 219099100 + 219099080 219099120 41 AAAGAGGGTGTACGGGAGTTTCTTGGTAAATCCAGAATCAG AAAGAGGGTGTACGGGAGTTTATTGGTAAATCCAGAATCAG < 41bp 0.498826612622145 0.832356107455023 0.17457914 0.3597997 prediction 0.664712214910047 Functional Gain - ARPC2 ENSG00000163466 CDS Human protein_coding chr2:219099100 chr2:219099101 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26285 0 0 1 0 2 Cytosol 0.43871858670347 0.438718592994663 0 0 hPsi_site_20009 iPseU_CNN:0;iRNA_PseU:0 20010 chr2 89049591 89049591 1 + G A LUAD 89049590 + 89049570 89049610 41 ACATGAGGGAGAAGCCTTTCTGTTGACCCTGCAAGGAGCAG ACATGAGGGAGAAGCCTTTCTATTGACCCTGCAAGGAGCAG < 41bp 0.432576648730748 0.832351934768983 0.27082765 0.3822271 prediction 0.664703869537967 Functional Gain - RPIA ENSG00000153574 CDS Human protein_coding chr2:89049590 chr2:89049591 nonsynonymous SNV 0.923 1 22 hPsi_associated_SNPs_26286 0 0 1 0 1 Cytosol 0.438743259265841 0.438732043687179 0 0 hPsi_site_20010 iPseU_CNN:0;iRNA_PseU:0 20011 chr1 110200434 110200434 1 + G A SKCM 110200433 + 110200413 110200453 41 GAAGATTCGTGTGGACATTTTGGAGAACCAGGCTATGGACG GAAGATTCGTGTGGACATTTTAGAGAACCAGGCTATGGACG < 41bp 0.419137590214701 0.832345699198475 0.6088405 0.7636455 prediction 0.66469139839695 Functional Gain - GSTM4 ENSG00000168765 CDS Human protein_coding chr1:110200433 chr1:110200434 synonymous SNV . 0 22 hPsi_associated_SNPs_26287 0 0 1 0 2 Cytosol 0.438722992404189 0.438710673617893 0.30961 0 hPsi_site_20011 iPseU_CNN:0.30961;iRNA_PseU:0 20012 chr1 101705205 101705205 1 + G A COAD 101705204 + 101705184 101705224 41 TCTCCATCGTCATTCTGTACTGCAGAATCTACTCCTTGGTC TCTCCATCGTCATTCTGTACTACAGAATCTACTCCTTGGTC < 41bp 0.426520983842591 0.832344351566164 0.2776348 0.46822324 prediction 0.664688703132329 Functional Gain - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101705204 chr1:101705205 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26288 0 0 0 0 0 Endoplasmic reticulum 0.439666266808062 0.443288421831312 0 0 hPsi_site_20012 iPseU_CNN:0;iRNA_PseU:0 20013 chr6 33170809 33170809 1 + G A ESCA 33170808 + 33170788 33170828 41 GGGATCCTGACCACAATGACTGTCCTGCTACATGAAGTGCC GGGATCCTGACCACAATGACTATCCTGCTACATGAAGTGCC < 41bp 0.520474364120939 0.852818360420148 0.26057583 0.34918293 prediction 0.664687992598419 Functional Gain - SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33170808 chr6:33170809 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26289 0 0 1 0 1 Ribosome 0.438678199022254 0.438718495658626 0 0 hPsi_site_20013 iPseU_CNN:0;iRNA_PseU:0 20014 chr19 10131437 10131437 1 + C A UCEC 10131436 + 10131416 10131456 41 CAAGTTCGCCCTGGAGGGATTCTTCGAAAGCCTCGCTATCC CAAGTTCGCCCTGGAGGGATTATTCGAAAGCCTCGCTATCC < 41bp 0.465439033518738 0.832340436816743 0.32694882 0.66815263 prediction 0.664680873633485 Functional Gain - RDH8 ENSG00000080511 CDS Human protein_coding chr19:10131436 chr19:10131437 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_26290 0 0 0 0 2 unknown 0.438718583951941 0.438595832561432 0.33630526 0 hPsi_site_20014 iPseU_CNN:0.33630526;iRNA_PseU:0 20015 chr22 39382383 39382383 1 + G A STAD 39382382 + 39382362 39382402 41 TACAAATTCGATGAAAATTATGCATTCCTGCACCGCACGCT TACAAATTCGATGAAAATTATACATTCCTGCACCGCACGCT < 41bp 0.433193911826902 0.832339273243475 0.48858035 0.62416136 prediction 0.66467854648695 Functional Gain - APOBEC3B ENSG00000179750 CDS Human protein_coding chr22:39382382 chr22:39382383 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26291 0 0 0 0 2 exosome 0.438717947745841 0.438719336514065 0.24832272 0 hPsi_site_20015 iPseU_CNN:0.24832272;iRNA_PseU:0 20016 chr5 140603401 140603401 1 + G A SKCM 140603400 + 140603380 140603420 41 CTGTGTGCTGCATTTTCAGGTGGTTTTGGAAAACCCTTTAC CTGTGTGCTGCATTTTCAGGTAGTTTTGGAAAACCCTTTAC < 41bp 0.441903432947759 0.832336200513694 0.240327 0.3148266 prediction 0.664672401027388 Functional Gain - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140603400 chr5:140603401 synonymous SNV . 0 22 hPsi_associated_SNPs_26292 0 0 0 0 0 exosome 0.438718592994421 0.438718223111585 0 0 hPsi_site_20016 iPseU_CNN:0;iRNA_PseU:0 20017 chr17 80010326 80010326 1 + G A SKCM 80010325 + 80010305 80010345 41 CAGCCTGTCGGCCTGTACGCTGCTCTACGAGGTACCTTCCA CAGCCTGTCGGCCTGTACGCTACTCTACGAGGTACCTTCCA < 41bp 0.438292960862533 0.832330120769078 0.42725176 0.89436245 prediction 0.664660241538155 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80010325 chr17:80010326 synonymous SNV . 0 22 hPsi_associated_SNPs_26293 0 0 1 0 2 Cytosol 0.441434760751023 0.439895010363789 0.7887249 0 hPsi_site_20017 iPseU_CNN:0.7887249;iRNA_PseU:0 20018 chr22 19119533 19119533 1 + C T HNSC 19119534 - 19119514 19119554 41 CATGGAGCCGCAGACCATGATGTACAGGATCACGCCCAGGC CATGGAGCCGCAGACCATGATATACAGGATCACGCCCAGGC < 41bp 0.548796619723302 0.881126353924469 0.27133816 0.43989238 prediction 0.664659468402335 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119534 chr22:19119533 synonymous SNV . 0 22 hPsi_associated_SNPs_26294 0 0 0 1 0 exosome 0.436504955044117 0.438161481294355 0 0 hPsi_site_20018 iPseU_CNN:0;iRNA_PseU:0 20019 chr11 57367638 57367638 1 + C A COAD 57367637 + 57367617 57367657 41 CTACCCAGCTCCCAACAGATTCTCCTACCCAGCCCACTACT CTACCCAGCTCCCAACAGATTATCCTACCCAGCCCACTACT < 41bp 0.535155364278104 0.867478644970156 0.2877737 0.27092713 prediction 0.664646561384102 Functional Gain - SERPING1 ENSG00000149131 CDS Human protein_coding chr11:57367637 chr11:57367638 nonsynonymous SNV 0.148 1 22 hPsi_associated_SNPs_26295 0 0 1 0 0 Endoplasmic reticulum 0.438718592767065 0.438719058845563 0 0 hPsi_site_20019 iPseU_CNN:0;iRNA_PseU:0 20020 chr6 32713600 32713600 1 + C A HNSC 32713599 + 32713579 32713619 41 GTCACAGTGTTTTCCAAGTTTCCTGTGACGCTGGGTCAGCC GTCACAGTGTTTTCCAAGTTTACTGTGACGCTGGGTCAGCC < 41bp 0.477933706265487 0.83232314969516 0.25960153 0.31567317 prediction 0.664646299390319 Functional Gain - HLA-DQA2 ENSG00000237541 CDS Human protein_coding chr6:32713599 chr6:32713600 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_26296 0 0 0 0 1 exosome 0.438694211240615 0.438853176375135 0 0 hPsi_site_20020 iPseU_CNN:0;iRNA_PseU:0 20021 chr2 12880875 12880875 1 + G A COAD 12880874 + 12880854 12880894 41 GGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAG GGAAGTGTCTGACCAGCTGGTACCGGACGTCAACATGGAAG < 41bp 0.432222902429651 0.832320624892656 0.1634196 0.6519015 prediction 0.664641249785311 Functional Gain - TRIB2 ENSG00000071575 CDS Human protein_coding chr2:12880874 chr2:12880875 synonymous SNV . 0 22 hPsi_associated_SNPs_26297 0 0 0 0 0 Cytosol 0.438718720879265 0.43871344426343 0.303803 0 hPsi_site_20021 iPseU_CNN:0.303803;iRNA_PseU:0 20022 chr1 120254545 120254545 1 + G A rs562038 120254544 + 120254524 120254564 41 GATGACTGGGGAGCGGGAGCTGGAGAATACTGCCCAGTTAC GATGACTGGGGAGCGGGAGCTAGAGAATACTGCCCAGTTAC < 41bp 0.451584658923725 0.832315832489275 0.27054334 0.65668434 prediction 0.66463166497855 Functional Gain - PHGDH ENSG00000092621 UTR5 Human protein_coding chr1:120254544 chr1:120254545 . . 0 22 hPsi_associated_SNPs_26298 0 0 1 0 0 Ribosome 0.438720986242241 0.438718124241314 0.31336868 0 hPsi_site_20022 iPseU_CNN:0.31336868;iRNA_PseU:0 20023 chr3 183901308 183901308 1 + G A BLCA 183901307 + 183901287 183901327 41 TGGCCTCAAGGTGCGCTACTTGAAGGTGTTTGAACCGAAGC TGGCCTCAAGGTGCGCTACTTAAAGGTGTTTGAACCGAAGC < 41bp 0.557449527750581 0.889759188673251 0.27786124 0.684665 prediction 0.664619321845341 Functional Gain - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183901307 chr3:183901308 synonymous SNV . 0 22 hPsi_associated_SNPs_26299 0 0 1 0 1 Ribosome 0.438666030779574 0.43828252815553 0.36933 0 hPsi_site_20023 iPseU_CNN:0.36933;iRNA_PseU:0 20024 chr12 132551360 132551360 1 + G A UCEC 132551359 + 132551339 132551379 41 GCTGCAGGCGCAAGGGCAGATGCAGACCCAGGCACCCCAGC GCTGCAGGCGCAAGGGCAGATACAGACCCAGGCACCCCAGC < 41bp 0.438457294516729 0.832305121459157 0.46822572 0.7351431 prediction 0.664610242918314 Functional Gain - EP400 ENSG00000183495 CDS Human protein_coding chr12:132551359 chr12:132551360 nonsynonymous SNV 0.988 2 22 hPsi_associated_SNPs_26300 0 0 1 0 2 Cytosol 0.438718592995445 0.438718592822584 0.4702862 0 hPsi_site_20024 iPseU_CNN:0.4702862;iRNA_PseU:0 20025 chr4 129767565 129767565 1 + G A GBM 129767564 + 129767544 129767584 41 CCTGATCACTGCCATGAAGTTGCATGACTCCTACCAGCTGA CCTGATCACTGCCATGAAGTTACATGACTCCTACCAGCTGA < 41bp 0.564926698913676 0.897228189100518 0.41998014 0.8219124 prediction 0.664602980373683 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129767564 chr4:129767565 synonymous SNV . 0 22 hPsi_associated_SNPs_26301 0 0 1 0 1 Ribosome 0.438719084981939 0.438718688009076 0.6438248 0 hPsi_site_20025 iPseU_CNN:0.6438248;iRNA_PseU:0 20026 chr14 104618363 104618363 1 + C A PAAD 104618362 + 104618342 104618382 41 CTGTCCTCAGGATCCTTGCCTCTCTGCCCTGCTTCTCGACA CTGTCCTCAGGATCCTTGCCTATCTGCCCTGCTTCTCGACA < 41bp 0.511192014044441 0.843488782241507 0.4140539 0.8519512 prediction 0.664593536394132 Functional Gain - KIF26A ENSG00000066735 CDS Human protein_coding chr14:104618362 chr14:104618363 synonymous SNV . 0 22 hPsi_associated_SNPs_26302 0 0 1 0 1 Ribosome 0.438758063591402 0.438718592995106 0.7039024 0 hPsi_site_20026 iPseU_CNN:0.7039024;iRNA_PseU:0 20027 chr11 86048459 86048459 1 + G A KIRC 86048458 + 86048438 86048478 41 CCTTTTGGAGCCATGAATATTGTCCGAACTCCATCTGTTGC CCTTTTGGAGCCATGAATATTATCCGAACTCCATCTGTTGC < 41bp 0.428972566647875 0.832294542033617 0.3037535 0.61045855 prediction 0.664589084067234 Functional Gain - HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048458 chr11:86048459 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26303 0 0 0 0 1 nucleolus 0.438680981865341 0.438715006086537 0.2209171 0 hPsi_site_20027 iPseU_CNN:0.2209171;iRNA_PseU:0 20028 chr3 113795710 113795710 1 + C A LUSC 113795709 + 113795689 113795729 41 GGCTTCCTTCTGGATGGTTTTCAAGGAAATCCAACAACCCT GGCTTCCTTCTGGATGGTTTTAAAGGAAATCCAACAACCCT < 41bp 0.463270157822334 0.832289743275092 0.2841383 0.6867405 prediction 0.664579486550183 Functional Gain - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113795709 chr3:113795710 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_26304 0 0 1 0 0 Nucleus 0.438718589047811 0.438718510309467 0.373481 0 hPsi_site_20028 iPseU_CNN:0.373481;iRNA_PseU:0 20029 chr15 77241474 77241474 1 + C A COAD 77241473 + 77241453 77241493 41 AAGCTCTCTGAAGAAGAGATTCTGGAAAACCCGGACTTGTT AAGCTCTCTGAAGAAGAGATTATGGAAAACCCGGACTTGTT < 41bp 0.502684719042265 0.834974284846261 0.40285987 0.62102956 prediction 0.664579131607991 Functional Gain - RCN2 ENSG00000117906 CDS Human protein_coding chr15:77241473 chr15:77241474 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26305 0 0 1 0 1 Ribosome 0.438718844688313 0.4387184100485 0.24205912 0 hPsi_site_20029 iPseU_CNN:0.24205912;iRNA_PseU:0 20030 chr8 37986318 37986318 1 + C A STAD 37986317 + 37986297 37986337 41 GTTATGATAAATTTAGCTATTCTTGGCGGAGCAAAAAGGGA GTTATGATAAATTTAGCTATTATTGGCGGAGCAAAAAGGGA < 41bp 0.483536659282661 0.83228704000551 0.5519972 0.4921744 prediction 0.664574080011021 Functional Gain - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37986317 chr8:37986318 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26306 0 0 0 0 1 chromatin 0.438720811072171 0.438497189655538 0 0 hPsi_site_20030 iPseU_CNN:0;iRNA_PseU:0 20031 chr3 124459006 124459006 1 + C A UCEC 124459005 + 124458985 124459025 41 TCCTTATTGCGGAAATGAGCTCCACCGGCTCCCTGGCCACT TCCTTATTGCGGAAATGAGCTACACCGGCTCCCTGGCCACT < 41bp 0.523352719341197 0.855632111291617 0.3291914 0.77975506 prediction 0.664558783900839 Functional Gain - UMPS ENSG00000114491 CDS Human protein_coding chr3:124459005 chr3:124459006 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26307 0 0 1 0 1 Ribosome 0.438718588418645 0.437571156998215 0.55951012 0 hPsi_site_20031 iPseU_CNN:0.55951012;iRNA_PseU:0 20032 chr15 42631929 42631929 1 + G A LUAD 42631928 + 42631908 42631948 41 CTAGTGCGTTGGTACCAGGCTGGAGCCTACCAGCCCTTCTT CTAGTGCGTTGGTACCAGGCTAGAGCCTACCAGCCCTTCTT < 41bp 0.415040222018125 0.83227790812591 0.5321497 0.8509878 prediction 0.664555816251819 Functional Gain - GANC ENSG00000214013 CDS Human protein_coding chr15:42631928 chr15:42631929 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_26308 0 0 0 0 1 chromatin 0.438718592995102 0.438718592995102 0.6376762 0 hPsi_site_20032 iPseU_CNN:0.6376762;iRNA_PseU:0 20033 chrX 100510206 100510206 1 + C A UCEC 100510205 + 100510185 100510225 41 GGAAAGTCAAAATTGCTCCTTCTTTAATGACAGCTTGTCCC GGAAAGTCAAAATTGCTCCTTATTTAATGACAGCTTGTCCC < 41bp 0.471885682042976 0.832271195799709 0.7571775 0.6888986 prediction 0.664542391599418 Functional Gain - DRP2 ENSG00000102385 CDS Human protein_coding chrX:100510205 chrX:100510206 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26309 0 0 0 0 2 nucleoplasm 0.438602716235691 0.438725397236239 0 0 hPsi_site_20033 iPseU_CNN:0;iRNA_PseU:0 20034 chr11 65394909 65394909 1 + G A UCEC 65394908 + 65394888 65394928 41 GCTGATGACCGTGGCTGGGCTGAAGCTGCTGCGCTCAGCCT GCTGATGACCGTGGCTGGGCTAAAGCTGCTGCGCTCAGCCT < 41bp 0.419654225299042 0.832264303492377 0.3148047 0.6058379 prediction 0.664528606984754 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65394908 chr11:65394909 synonymous SNV . 0 22 hPsi_associated_SNPs_26310 0 0 1 0 1 Ribosome 0.438717257845992 0.438713387219741 0.2116758 0 hPsi_site_20034 iPseU_CNN:0.2116758;iRNA_PseU:0 20035 chr22 45258539 45258539 1 + G A rs2071763 45258538 + 45258518 45258558 41 GTCTGTGCACTTGTATGTTTTGTAAACTTGGCATCTGTAAA GTCTGTGCACTTGTATGTTTTATAAACTTGGCATCTGTAAA < 41bp 0.527330588525779 0.859587520735138 0.23422262 0.27865905 prediction 0.664513864418718 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 UTR3 Human other chr22:45258538 chr22:45258539 . . 0 22 hPsi_associated_SNPs_26311 0 0 1 0 0 unknown 0.4387605236409 0.438719770062738 0 0 hPsi_site_20035 iPseU_CNN:0;iRNA_PseU:0 20036 chr16 3254532 3254532 1 + G A COAD 3254531 + 3254511 3254551 41 ACTCAGACCATCTCCTTCTGTGGCTGTCTCACACAGATGTA ACTCAGACCATCTCCTTCTGTAGCTGTCTCACACAGATGTA < 41bp 0.437529784427008 0.832253612438588 0.2783764 0.5948878 prediction 0.664507224877177 Functional Gain - OR1F1 ENSG00000168124 CDS Human protein_coding chr16:3254531 chr16:3254532 nonsynonymous SNV 0.040 1 22 hPsi_associated_SNPs_26312 0 0 0 0 0 exosome 0.439461163423198 0.430217981060692 0.1897756 0 hPsi_site_20036 iPseU_CNN:0.1897756;iRNA_PseU:0 20037 chr16 30594463 30594463 1 + G A COAD 30594462 + 30594442 30594482 41 CTGATGCTGGAGCAGGTACCTGCGCTGGGAGAAACGCGCCT CTGATGCTGGAGCAGGTACCTACGCTGGGAGAAACGCGCCT < 41bp 0.445714265599972 0.83225178747932 0.28193647 0.640893 prediction 0.664503574958641 Functional Gain - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594462 chr16:30594463 synonymous SNV . 0 22 hPsi_associated_SNPs_26313 0 0 0 0 0 Nucleus 0.438718591633701 0.438718499870822 0.281786 0 hPsi_site_20037 iPseU_CNN:0.281786;iRNA_PseU:0 20038 chr22 42276881 42276881 1 + C A GBM 42276880 + 42276860 42276900 41 GCGCTGGCTGCTCAAGAAAGTCTTCCAGTGCCGGCGGGCCA GCGCTGGCTGCTCAAGAAAGTATTCCAGTGCCGGCGGGCCA < 41bp 0.536240706267734 0.868488702962556 0.27915877 0.6426766 prediction 0.664495993389644 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276880 chr22:42276881 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_26314 0 0 1 1 0 Ribosome 0.438766795055447 0.43879481118613 0.2853532 0 hPsi_site_20038 iPseU_CNN:0.2853532;iRNA_PseU:0 20039 chr1 229770955 229770955 1 + G A rs142870295 229770954 + 229770934 229770974 41 CGTGCCTTTGGGGATGTGACTGCTCACCTGCTCCAGCCGTG CGTGCCTTTGGGGATGTGACTACTCACCTGCTCCAGCCGTG < 41bp 0.42605775013245 0.83224467173926 0.20716497 0.29504132 prediction 0.66448934347852 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770954 chr1:229770955 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_26315 0 0 1 0 0 Nucleus 0.438744300580059 0.438803031024344 0 0 hPsi_site_20039 iPseU_CNN:0;iRNA_PseU:0 20040 chr19 14160099 14160099 1 + G A SKCM 14160098 + 14160078 14160118 41 TACACCTTGTGTGCACAGAGTGGAACCAGCCCCTCCGTCTG TACACCTTGTGTGCACAGAGTAGAACCAGCCCCTCCGTCTG < 41bp 0.417691779996583 0.832238834532151 0.22406754 0.57105404 prediction 0.664477669064302 Functional Gain - IL27RA ENSG00000104998 CDS Human protein_coding chr19:14160098 chr19:14160099 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26316 0 0 0 0 1 chromatin 0.438718592850887 0.438718593018389 0.14210808 0 hPsi_site_20040 iPseU_CNN:0.14210808;iRNA_PseU:0 20041 chr20 30918001 30918001 1 + G A CESC 30918000 + 30917980 30918020 41 AGCCGGACCACCAGAGACTATGAGGGTCCAGCCATTGCCCC AGCCGGACCACCAGAGACTATAAGGGTCCAGCCATTGCCCC < 41bp 0.413422914464534 0.832231210331555 0.33794007 0.5493932 prediction 0.664462420663109 Functional Gain - KIF3B ENSG00000101350 CDS Human protein_coding chr20:30918000 chr20:30918001 nonsynonymous SNV 0.980 1 22 hPsi_associated_SNPs_26317 0 0 0 0 1 Ribosome 0.438718379994334 0.438718593095783 0.0987864000000001 0 hPsi_site_20041 iPseU_CNN:0.0987864000000001;iRNA_PseU:0 20042 chr21 46888337 46888337 1 + C A rs149578781 46888336 + 46888316 46888356 41 CCGTGACTTCTCACTGCTGTTCCACATCCGGCCAGCCACAG CCGTGACTTCTCACTGCTGTTACACATCCGGCCAGCCACAG < 41bp 0.475168325899715 0.832230321307136 0.3224344 0.75257635 prediction 0.664460642614271 Functional Gain - COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46888336 chr21:46888337 nonsynonymous SNV 0.065 1 22 hPsi_associated_SNPs_26318 0 0 1 0 0 Nucleus 0.438719858779605 0.43870080685518 0.5051527 0 hPsi_site_20042 iPseU_CNN:0.5051527;iRNA_PseU:0 20043 chr17 27225592 27225592 1 + G T UCEC 27225593 - 27225573 27225613 41 CTGAGGACTCAGAGGCCCCATCTTCTCTAAGCACCCCCCAC CTGAGGACTCAGAGGCCCCATATTCTCTAAGCACCCCCCAC < 41bp 0.530787511795202 0.863015621701242 0.31436875 0.34410828 prediction 0.66445621981208 Functional Gain - DHRS13 ENSG00000167536 CDS Human protein_coding chr17:27225593 chr17:27225592 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_26319 0 0 1 0 0 Ribosome 0.438714547294766 0.438718501853256 0 0 hPsi_site_20043 iPseU_CNN:0;iRNA_PseU:0 20044 chr6 107003729 107003729 1 + G A UCEC 107003728 + 107003708 107003748 41 CTTGTCTGTCTGCAATGGGATGCCCGCCTGGAGCAACTTTC CTTGTCTGTCTGCAATGGGATACCCGCCTGGAGCAACTTTC < 41bp 0.428917736796626 0.832225239855833 0.27500725 0.63052666 prediction 0.664450479711665 Functional Gain - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:107003728 chr6:107003729 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26320 0 0 0 0 2 unknown 0.438727853715862 0.438687045020983 0.26105332 0 hPsi_site_20044 iPseU_CNN:0.26105332;iRNA_PseU:0 20045 chr19 11474862 11474862 1 + C A LUSC 11474861 + 11474841 11474881 41 CCGAGGTCTGCAGGCCGCATTCGACACCGGCACGGCTCACC CCGAGGTCTGCAGGCCGCATTAGACACCGGCACGGCTCACC < 41bp 0.53110901293266 0.863332831610874 0.5829677 0.5837217 prediction 0.664447637356427 Functional Gain - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474861 chr19:11474862 stopgain 1.000 0 22 hPsi_associated_SNPs_26321 0 0 1 0 2 exosome 0.438723282695285 0.438528940259636 0.00150800000000006 0 hPsi_site_20045 iPseU_CNN:0.00150800000000006;iRNA_PseU:0 20046 chrX 140953365 140953365 1 + C A LUAD 140953364 + 140953344 140953384 41 TCAGATCAGCGAATGGATAGTCTTGTCCTCTGCCCCACATA TCAGATCAGCGAATGGATAGTATTGTCCTCTGCCCCACATA < 41bp 0.473663888761059 0.832223259353083 0.2226975 0.57902044 prediction 0.664446518706167 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140953364 chrX:140953365 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_26322 0 0 0 0 1 exosome 0.438688574631113 0.438770234358763 0.15804088 0 hPsi_site_20046 iPseU_CNN:0.15804088;iRNA_PseU:0 20047 chr3 183873534 183873534 1 + G A PAAD 183873533 + 183873513 183873553 41 GGCGGACTTTAAGGGCGTTTTGCAGCGACCCAGCTATAAGT GGCGGACTTTAAGGGCGTTTTACAGCGACCCAGCTATAAGT < 41bp 0.455280760347597 0.832220024852259 0.22549373 0.4020494 prediction 0.664440049704518 Functional Gain - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183873533 chr3:183873534 synonymous SNV . 0 22 hPsi_associated_SNPs_26323 0 0 1 0 1 Cytosol 0.43871859362002 0.438718591613342 0 0 hPsi_site_20047 iPseU_CNN:0;iRNA_PseU:0 20048 chr10 74879807 74879807 1 + G A UCEC 74879806 + 74879786 74879826 41 GAACTGAAGGAAGATGATGATGCATGTAAAAAAGCCCAGCA GAACTGAAGGAAGATGATGATACATGTAAAAAAGCCCAGCA < 41bp 0.519910066569948 0.852119648231932 0.20527619 0.5006598 prediction 0.664419163323966 Functional Gain - NUDT13 ENSG00000166321 CDS Human protein_coding chr10:74879806 chr10:74879807 nonsynonymous SNV 0.966 2 22 hPsi_associated_SNPs_26324 0 0 0 1 1 Cytosol 0.444963531258773 0.440575589862968 0.00131959999999998 0 hPsi_site_20048 iPseU_CNN:0.00131959999999998;iRNA_PseU:0 20049 chr20 54824613 54824613 1 + G A LUSC 54824612 + 54824592 54824632 41 CCCACAGCAACACTCATGCATGAAGGGGGCAGTCACCATCA CCCACAGCAACACTCATGCATAAAGGGGGCAGTCACCATCA < 41bp 0.545641064548737 0.877843486583834 0.34008312 0.68992287 prediction 0.664404844070196 Functional Gain - MC3R ENSG00000124089 CDS Human protein_coding chr20:54824612 chr20:54824613 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26325 0 0 0 0 0 unknown 0.438728663351327 0.438716334677473 0.37984574 0 hPsi_site_20049 iPseU_CNN:0.37984574;iRNA_PseU:0 20050 chr2 7027222 7027222 1 + C A UCEC 7027221 + 7027201 7027241 41 GAGTCGCTTTCAAGATAAATTCTGTCATTAATCGTTTCAAC GAGTCGCTTTCAAGATAAATTATGTCATTAATCGTTTCAAC < 41bp 0.523628566164588 0.855824593119345 0.18359536 0.2239311 prediction 0.664392053909513 Functional Gain - RSAD2 ENSG00000134321 CDS Human protein_coding chr2:7027221 chr2:7027222 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26326 0 0 0 0 1 exosome 0.438647116569881 0.438530580457783 0 0 hPsi_site_20050 iPseU_CNN:0;iRNA_PseU:0 20051 chr5 159476637 159476637 1 + C A UCEC 159476636 + 159476616 159476656 41 AAATCTATATTAGAAAAAGATCCATCAATACATCAAGCAAG AAATCTATATTAGAAAAAGATACATCAATACATCAAGCAAG < 41bp 0.505766301338247 0.837961405285019 0.22829568 0.42142224 prediction 0.664390207893543 Functional Gain - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159476636 chr5:159476637 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26327 0 0 1 0 1 Ribosome 0.438906087934302 0.439772508395393 0 0 hPsi_site_20051 iPseU_CNN:0;iRNA_PseU:0 20052 chr1 63991268 63991268 1 + G A COAD 63991267 + 63991247 63991287 41 GCGATCAGTCCACGAAGCGATGCAACTTTCTCCAGTCAGAA GCGATCAGTCCACGAAGCGATACAACTTTCTCCAGTCAGAA < 41bp 0.448810519622232 0.832195076037492 0.23646137 0.4660143 prediction 0.664390152074984 Functional Gain - EFCAB7 ENSG00000203965 CDS Human protein_coding chr1:63991267 chr1:63991268 nonsynonymous SNV 0.363 1 22 hPsi_associated_SNPs_26328 0 0 0 0 1 Cytosol 0.438718891799223 0.438719268841102 0 0 hPsi_site_20052 iPseU_CNN:0;iRNA_PseU:0 20053 chr19 3179675 3179675 1 + G A SKCM 3179674 + 3179654 3179694 41 CATGGACTGGATCCTGGCCCTGGCCGTCCTCAACTCGGCGG CATGGACTGGATCCTGGCCCTAGCCGTCCTCAACTCGGCGG < 41bp 0.451542218916217 0.832192835694665 0.18992415 0.40628868 prediction 0.66438567138933 Functional Gain - S1PR4 ENSG00000125910 CDS Human protein_coding chr19:3179674 chr19:3179675 synonymous SNV . 0 22 hPsi_associated_SNPs_26329 0 0 0 0 0 exosome 0.438716365439133 0.438718592552781 0 0 hPsi_site_20053 iPseU_CNN:0;iRNA_PseU:0 20054 chr19 10124205 10124205 1 + C A LUAD 10124204 + 10124184 10124224 41 CACCCCGGACTGTGTTGATCTCCGGCTGCTCATCAGGAATT CACCCCGGACTGTGTTGATCTACGGCTGCTCATCAGGAATT < 41bp 0.524701616731227 0.856882824031558 0.14423606 0.29171574 prediction 0.664362414600662 Functional Gain - RDH8 ENSG00000080511 CDS Human protein_coding chr19:10124204 chr19:10124205 nonsynonymous SNV 0.653 4 22 hPsi_associated_SNPs_26330 0 0 0 0 0 unknown 0.438718592999164 0.438718600874402 0 0 hPsi_site_20054 iPseU_CNN:0;iRNA_PseU:0 20055 chr12 94562982 94562982 1 + C A LUSC 94562981 + 94562961 94563001 41 AATCGCATCATCTACCTTGATCCATTCCGACCTGACATCCG AATCGCATCATCTACCTTGATACATTCCGACCTGACATCCG < 41bp 0.52867014470364 0.860847811058824 0.34112024 0.6042774 prediction 0.664355332710368 Functional Gain - PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94562981 chr12:94562982 synonymous SNV . 0 22 hPsi_associated_SNPs_26331 0 0 1 0 2 chromatin 0.438725551541893 0.438718502283586 0.2085548 0 hPsi_site_20055 iPseU_CNN:0.2085548;iRNA_PseU:0 20056 chr2 74685732 74685732 1 + G A TGCT 74685731 + 74685711 74685751 41 GGGGGCTGTAGGTGGAGGTATGGCTCGGGCCAGCAGCGGGA GGGGGCTGTAGGTGGAGGTATAGCTCGGGCCAGCAGCGGGA < 41bp 0.442660311399271 0.832174111295843 0.46439174 0.7698463 prediction 0.664348222591686 Functional Gain - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74685731 chr2:74685732 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26332 0 0 1 1 1 cytosol 0.438718553684331 0.438718593009018 0.5396926 0 hPsi_site_20056 iPseU_CNN:0.5396926;iRNA_PseU:0 20057 chr10 29773607 29773607 1 + C A UCEC 29773606 + 29773586 29773626 41 TGGGGATAAGCGGATTGCATTCTCCAGGATCCAGGGGATTG TGGGGATAAGCGGATTGCATTATCCAGGATCCAGGGGATTG < 41bp 0.488597946810936 0.832169897756692 0.2756452 0.6949874 prediction 0.664339795513384 Functional Gain - SVIL ENSG00000197321 CDS Human protein_coding chr10:29773606 chr10:29773607 stopgain 0.984 1 22 hPsi_associated_SNPs_26333 0 0 1 0 0 Nucleus 0.438717770944433 0.438718536075638 0.3899748 0 hPsi_site_20057 iPseU_CNN:0.3899748;iRNA_PseU:0 20058 chr20 25277062 25277062 1 + C A UCEC 25277061 + 25277041 25277081 41 CATCGCCTGCTCGGGCAAGTTCTCCAGTGACCGGACCATCA CATCGCCTGCTCGGGCAAGTTATCCAGTGACCGGACCATCA < 41bp 0.511335588881679 0.843504744401235 0.34599328 0.5698116 prediction 0.664338311039113 Functional Gain - PYGB ENSG00000100994 CDS Human protein_coding chr20:25277061 chr20:25277062 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26334 0 0 1 0 1 Nucleus 0.4383569205737 0.43871371147585 0.1396232 0 hPsi_site_20058 iPseU_CNN:0.1396232;iRNA_PseU:0 20059 chr11 71850804 71850804 1 + G A SKCM 71850803 + 71850783 71850823 41 TCAGCCCAGGGCAACCCCAATGAGGAGGTGGCCAAGTTCTA TCAGCCCAGGGCAACCCCAATAAGGAGGTGGCCAAGTTCTA < 41bp 0.558202523935779 0.890365092143243 0.2621801 0.30104542 prediction 0.664325136414928 Functional Gain - FOLR3 ENSG00000110203 CDS Human protein_coding chr11:71850803 chr11:71850804 nonsynonymous SNV 0.965 2 22 hPsi_associated_SNPs_26335 0 0 0 0 0 Endoplasmic reticulum 0.438718592993198 0.438718592995102 0 0 hPsi_site_20059 iPseU_CNN:0;iRNA_PseU:0 20060 chr19 549077 549077 1 + C A rs59235301 549076 + 549056 549096 41 GGTGCTGCGGGAGCTGGACCTCCAAGTGCTGGACACCCGCA GGTGCTGCGGGAGCTGGACCTACAAGTGCTGGACACCCGCA < 41bp 0.472662137428768 0.832160162352129 0.25391424 0.60553056 prediction 0.664320324704259 Functional Gain - GZMM ENSG00000197540 CDS Human protein_coding chr19:549076 chr19:549077 synonymous SNV . 0 22 hPsi_associated_SNPs_26336 0 0 0 0 0 exosome 0.438765228160287 0.438718812746936 0.21106112 0 hPsi_site_20060 iPseU_CNN:0.21106112;iRNA_PseU:0 20061 chr19 2408537 2408537 1 + C A LUAD 2408536 + 2408516 2408556 41 TCTGCCTTTCGGCCGGCACATCCAGCCCGTGTGCCTCCCGG TCTGCCTTTCGGCCGGCACATACAGCCCGTGTGCCTCCCGG < 41bp 0.530921780195457 0.863081131734643 0.3770234 0.6431984 prediction 0.66431870307837 Functional Gain - TMPRSS9 ENSG00000178297 CDS Human protein_coding chr19:2408536 chr19:2408537 synonymous SNV . 0 22 hPsi_associated_SNPs_26337 0 0 0 0 1 chromatin 0.438718587522567 0.438726132164845 0.2863968 0 hPsi_site_20061 iPseU_CNN:0.2863968;iRNA_PseU:0 20062 chr16 89804287 89804287 1 + G A UCEC 89804286 + 89804266 89804306 41 GCACCTTCTCGTCCACCAAATGCGACATTCGGGAGCCAAGC GCACCTTCTCGTCCACCAAATACGACATTCGGGAGCCAAGC < 41bp 0.433589147348307 0.832148780759414 0.26057044 0.35150975 prediction 0.664297561518828 Functional Gain - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89804286 chr16:89804287 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26338 0 0 1 0 2 Nucleus 0.438610830342606 0.438696626447182 0 0 hPsi_site_20062 iPseU_CNN:0;iRNA_PseU:0 20063 chr7 4820890 4820890 1 + C A rs146682319 4820889 + 4820869 4820909 41 GGACTTGGGGCCGGACACCCTCGACTCCCTGCAGAGGCTCT GGACTTGGGGCCGGACACCCTAGACTCCCTGCAGAGGCTCT < 41bp 0.472181930631706 0.832147273500216 0.3454759 0.3375184 prediction 0.664294547000432 Functional Gain - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4820889 chr7:4820890 synonymous SNV . 0 22 hPsi_associated_SNPs_26339 0 0 0 0 2 chromatin 0.438659095814339 0.438718233879459 0 0 hPsi_site_20063 iPseU_CNN:0;iRNA_PseU:0 20064 chr2 169721449 169721449 1 + C A UCEC 169721448 + 169721428 169721468 41 CTTATGTGGAGGAGTTACCTTCAAATGCTGGCAACACAGCT CTTATGTGGAGGAGTTACCTTAAAATGCTGGCAACACAGCT < 41bp 0.507213698605365 0.839356117617857 0.62390965 0.6765519 prediction 0.664284838024984 Functional Gain - NOSTRIN ENSG00000163072 CDS Human protein_coding chr2:169721448 chr2:169721449 stopgain 0.069 0 22 hPsi_associated_SNPs_26340 0 0 0 0 0 chromatin 0.438711575339231 0.438720577086819 0.1052845 0 hPsi_site_20064 iPseU_CNN:0.1052845;iRNA_PseU:0 20065 chr1 15546027 15546027 1 + G A CESC 15546026 + 15546006 15546046 41 GCTGACGTGGAGGCCAGCCCTGGGAACCCCCCTGACAGGCA GCTGACGTGGAGGCCAGCCCTAGGAACCCCCCTGACAGGCA < 41bp 0.426568443614799 0.832142326822676 0.23382452 0.3203038 prediction 0.664284653645351 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15546026 chr1:15546027 nonsynonymous SNV 0.089 1 22 hPsi_associated_SNPs_26341 0 0 1 0 0 cytosol 0.438098000686763 0.438718593435221 0 0 hPsi_site_20065 iPseU_CNN:0;iRNA_PseU:0 20066 chr5 3600136 3600136 1 + G A rs61746094 3600135 + 3600115 3600155 41 GCTGCAACACCCCGCCTTCCTGCCTAGCCACGGACTGTACA GCTGCAACACCCCGCCTTCCTACCTAGCCACGGACTGTACA < 41bp 0.559723022006218 0.891861402972375 0.31645614 0.7199321 prediction 0.664276761932314 Functional Gain - IRX1 ENSG00000170549 CDS Human protein_coding chr5:3600135 chr5:3600136 synonymous SNV . 0 22 hPsi_associated_SNPs_26342 0 0 0 0 0 exosome 0.438718628679911 0.438721465470226 0.4398642 0 hPsi_site_20066 iPseU_CNN:0.4398642;iRNA_PseU:0 20067 chr16 69973945 69973945 1 + G A rs142551098 69973944 + 69973924 69973964 41 CCTTGGGAGGCCCCCGTGGATGTGGCCCTGTGTGGGACCAC CCTTGGGAGGCCCCCGTGGATATGGCCCTGTGTGGGACCAC < 41bp 0.444971236019892 0.832119614759716 0.3707102 0.5930077 prediction 0.664239229519432 Functional Gain - WWP2 ENSG00000198373 UTR3 Human protein_coding chr16:69973944 chr16:69973945 . . 0 22 hPsi_associated_SNPs_26343 0 0 1 0 0 Ribosome 0.438709566773756 0.438716528492667 0.1860154 0 hPsi_site_20067 iPseU_CNN:0.1860154;iRNA_PseU:0 20068 chrX 48418401 48418401 1 + G A LUSC 48418400 + 48418380 48418420 41 CTGGCCGCCAACTTCCACCCTGACGGCCGCGCCATGGCCAC CTGGCCGCCAACTTCCACCCTAACGGCCGCGCCATGGCCAC < 41bp 0.421950384778392 0.832116889461546 0.23448452 0.2852139 prediction 0.664233778923092 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48418400 chrX:48418401 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_26344 0 0 1 0 0 nucleolus 0.438718343787159 0.438704172321336 0 0 hPsi_site_20068 iPseU_CNN:0;iRNA_PseU:0 20069 chr2 220045475 220045475 1 + C A UCEC 220045474 + 220045454 220045494 41 GATTATGATTTCCTACATTGTCTGTGAGTAGGGTCTGTCCC GATTATGATTTCCTACATTGTATGTGAGTAGGGTCTGTCCC < 41bp 0.462636780277529 0.832114791338181 0.32391545 0.70847535 prediction 0.664229582676361 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220045474 chr2:220045475 synonymous SNV . 0 22 hPsi_associated_SNPs_26345 0 0 1 0 2 unknown 0.438720184070202 0.438749196801792 0.4169507 0 hPsi_site_20069 iPseU_CNN:0.4169507;iRNA_PseU:0 20070 chr2 29404610 29404610 1 + G A LUSC 29404609 + 29404589 29404629 41 TCAGGTATCTGGCTTGGACTTGAGCTCCGAAGCGCCAAGGG TCAGGTATCTGGCTTGGACTTAAGCTCCGAAGCGCCAAGGG < 41bp 0.56401235867658 0.896121336369432 0.28974354 0.6451299 prediction 0.664217955385706 Functional Gain - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29404609 chr2:29404610 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_26346 0 0 1 0 0 nucleus 0.438722184232008 0.438183949694235 0.2902598 0 hPsi_site_20070 iPseU_CNN:0.2902598;iRNA_PseU:0 20071 chr10 48371318 48371318 1 + G A UCEC 48371317 + 48371297 48371337 41 CACCACTTCGTGGGCCCTCCTGCCACCCACCCTCACCTCCC CACCACTTCGTGGGCCCTCCTACCACCCACCCTCACCTCCC < 41bp 0.418075563780139 0.83209707313423 0.25223815 0.7879294 prediction 0.664194146268461 Functional Gain - ZNF488 ENSG00000165388 CDS Human other chr10:48371317 chr10:48371318 synonymous SNV . 0 22 hPsi_associated_SNPs_26347 0 0 0 0 0 exosome 0.43871859299512 0.438718617053669 0.5758588 0 hPsi_site_20071 iPseU_CNN:0.5758588;iRNA_PseU:0 20072 chr19 42351543 42351543 1 + C A SKCM 42351542 + 42351522 42351562 41 GCTACCACTGCCCCTTAGACTCTGCCCCCTGGGATGAGACC GCTACCACTGCCCCTTAGACTATGCCCCCTGGGATGAGACC < 41bp 0.533404370510882 0.865497814108214 0.33699033 0.58906317 prediction 0.664186887194663 Functional Gain - DMRTC2 ENSG00000142025 CDS Human protein_coding chr19:42351542 chr19:42351543 nonsynonymous SNV 0.034 3 22 hPsi_associated_SNPs_26348 0 0 0 0 1 exosome 0.438718592995102 0.438718595539556 0.17812634 0 hPsi_site_20072 iPseU_CNN:0.17812634;iRNA_PseU:0 20073 chr3 25835674 25835674 1 + G A HNSC 25835673 + 25835653 25835693 41 ACTTCCACACCATTGGGAGATGCTGCTGAAAACAAAGCTAT ACTTCCACACCATTGGGAGATACTGCTGAAAACAAAGCTAT < 41bp 0.444426861888591 0.832089145886641 0.2101618 0.27259713 prediction 0.664178291773282 Functional Gain - OXSM ENSG00000151093 CDS Human protein_coding chr3:25835673 chr3:25835674 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26349 0 0 0 0 1 Ribosome 0.438708461711801 0.437760242340097 0 0 hPsi_site_20073 iPseU_CNN:0;iRNA_PseU:0 20074 chr8 67086742 67086742 1 + G A UCEC 67086741 + 67086721 67086761 41 CCTCCCCTCCAGGGACAGGCTGCAGCTCCAGCGAGTGGCAG CCTCCCCTCCAGGGACAGGCTACAGCTCCAGCGAGTGGCAG < 41bp 0.558901286052827 0.890990028767774 0.4596722 0.5854331 prediction 0.664177485429894 Functional Gain - TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67086741 chr8:67086742 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_26350 0 0 0 0 1 exosome 0.43871859292077 0.43871859308693 0.1708662 0 hPsi_site_20074 iPseU_CNN:0.1708662;iRNA_PseU:0 20075 chr11 63671484 63671484 1 + C A CESC 63671483 + 63671463 63671503 41 CCATGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTGCC CCATGCCAGGGTCCCGGGCCTACACGGCTTCTGCTTCTGCC < 41bp 0.528161935187209 0.860250088524777 0.27618575 0.5911923 prediction 0.664176306675135 Functional Gain - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63671483 chr11:63671484 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26351 0 0 1 0 1 Nucleus 0.43871927057371 0.438731833333508 0.1823846 0 hPsi_site_20075 iPseU_CNN:0.1823846;iRNA_PseU:0 20076 chrX 37587127 37587127 1 + C A UCEC 37587126 + 37587106 37587146 41 CATCAACTTCTTCAGTTTCTTCTTGTACCCCTGGATCCTCT CATCAACTTCTTCAGTTTCTTATTGTACCCCTGGATCCTCT < 41bp 0.487495755658114 0.832086797125069 0.30084348 0.3242183 prediction 0.664173594250139 Functional Gain - XK ENSG00000047597 CDS Human protein_coding chrX:37587126 chrX:37587127 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_26352 0 0 1 0 0 Endoplasmic reticulum 0.438932689375096 0.438717438532863 0 0 hPsi_site_20076 iPseU_CNN:0;iRNA_PseU:0 20077 chr13 53603138 53603138 1 + C A BLCA 53603137 + 53603117 53603157 41 GCTCCAGGTCGGGCTCCAGCTCCAGCCGCAGCTTAGGCAGC GCTCCAGGTCGGGCTCCAGCTACAGCCGCAGCTTAGGCAGC < 41bp 0.491391888658947 0.832082950676987 0.40989166 0.59911126 prediction 0.664165901353974 Functional Gain - OLFM4 ENSG00000102837 CDS Human protein_coding chr13:53603137 chr13:53603138 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_26353 0 0 0 0 1 exosome 0.438718591845441 0.43873633410334 0.19822252 0 hPsi_site_20077 iPseU_CNN:0.19822252;iRNA_PseU:0 20078 chr11 82625802 82625802 1 + C A COAD 82625801 + 82625781 82625821 41 ATGAACAGAAGACGAAAATTTCTTCTAGCCTCAGTACTTGC ATGAACAGAAGACGAAAATTTATTCTAGCCTCAGTACTTGC < 41bp 0.523448647508065 0.855527684982909 0.29064894 0.6130497 prediction 0.664158074949687 Functional Gain - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82625801 chr11:82625802 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_26354 0 0 1 0 2 nucleus 0.438719317771672 0.438711765871458 0.2260994 0 hPsi_site_20078 iPseU_CNN:0.2260994;iRNA_PseU:0 20079 chr10 103827241 103827241 1 + C A GBM 103827240 + 103827220 103827260 41 TCCCCTGCTTCGAAGTGAAATCTTCAAACTGCTGCTGGCCG TCCCCTGCTTCGAAGTGAAATATTCAAACTGCTGCTGGCCG < 41bp 0.512126636363017 0.844197308663699 0.7043928 0.7064215 prediction 0.664141344601364 Functional Gain - HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827240 chr10:103827241 synonymous SNV . 0 22 hPsi_associated_SNPs_26355 0 0 0 0 0 Ribosome 0.438888457535979 0.438533146378996 0.00405739999999999 0 hPsi_site_20079 iPseU_CNN:0.00405739999999999;iRNA_PseU:0 20080 chr19 46733709 46733709 1 + C A LUAD 46733708 + 46733688 46733728 41 GCAGTGCTGCCCCTGGACCTTCATGGTGAAGCTGATAAACC GCAGTGCTGCCCCTGGACCTTAATGGTGAAGCTGATAAACC < 41bp 0.471010211125694 0.832066444043379 0.3047919 0.49664906 prediction 0.664132888086759 Functional Gain - IGFL1 ENSG00000188293 CDS Human protein_coding chr19:46733708 chr19:46733709 nonsynonymous SNV 0.102 0 22 hPsi_associated_SNPs_26356 0 0 0 0 1 exosome 0.438719670648369 0.438719115983421 0 0 hPsi_site_20080 iPseU_CNN:0;iRNA_PseU:0 20081 chr16 67005078 67005078 1 + G A rs148041133 67005077 + 67005057 67005097 41 CCTGGCCTCTTGCCCCAGGATGTGCCCCCTGAGATGATGCC CCTGGCCTCTTGCCCCAGGATATGCCCCCTGAGATGATGCC < 41bp 0.42627540704087 0.832062534816969 0.28374964 0.62969077 prediction 0.664125069633939 Functional Gain - CES3 ENSG00000172828 CDS Human protein_coding chr16:67005077 chr16:67005078 nonsynonymous SNV 0.046 0 22 hPsi_associated_SNPs_26357 0 0 1 0 1 nucleolus 0.438718593973799 0.438718593000369 0.25938154 0 hPsi_site_20081 iPseU_CNN:0.25938154;iRNA_PseU:0 20082 chr8 124094982 124094982 1 + C A KIRP 124094981 + 124094961 124095001 41 ACAGCACAAGCTTGCACAGCTCTGGCCTTTAATCTTCGTAG ACAGCACAAGCTTGCACAGCTATGGCCTTTAATCTTCGTAG < 41bp 0.505472683676197 0.837533126929102 0.28476363 0.34504482 prediction 0.664120886505808 Functional Gain - TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124094981 chr8:124094982 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26358 0 0 0 0 2 Cytosol 0.432658824492075 0.437418603925643 0 0 hPsi_site_20082 iPseU_CNN:0;iRNA_PseU:0 20083 chr17 77077087 77077087 1 + G A LUAD 77077086 + 77077066 77077106 41 GCAGGTCCCAGGGGGCCTGGTGCTCTGGTATGACAGCGTGG GCAGGTCCCAGGGGGCCTGGTACTCTGGTATGACAGCGTGG < 41bp 0.420547981784284 0.832060156631088 0.24438986 0.7534318 prediction 0.664120313262176 Functional Gain - ENGASE ENSG00000167280 CDS Human protein_coding chr17:77077086 chr17:77077087 synonymous SNV . 0 22 hPsi_associated_SNPs_26359 0 0 1 0 2 chromatin 0.438727748602851 0.438731179524125 0.5068636 0 hPsi_site_20083 iPseU_CNN:0.5068636;iRNA_PseU:0 20084 chr14 36005047 36005047 1 + G A UCEC 36005046 + 36005026 36005066 41 AAATTTTCTCGTGCAAGCACTGCCCGTCCACTTTTTTTAGC AAATTTTCTCGTGCAAGCACTACCCGTCCACTTTTTTTAGC < 41bp 0.436563435377853 0.832054184573107 0.19818035 0.5636932 prediction 0.664108369146214 Functional Gain - INSM2 ENSG00000168348 CDS Human protein_coding chr14:36005046 chr14:36005047 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_26360 0 0 1 0 0 unknown 0.438718595580102 0.438721066641561 0.1273864 0 hPsi_site_20084 iPseU_CNN:0.1273864;iRNA_PseU:0 20085 chr10 70775533 70775533 1 + C A UCEC 70775532 + 70775512 70775552 41 TGTCTTTGAGGCAAAAGAGTTCTTTCAGATTGATGGTTATG TGTCTTTGAGGCAAAAGAGTTATTTCAGATTGATGGTTATG < 41bp 0.48977933545018 0.832053266111794 0.3980176 0.35628745 prediction 0.664106532223588 Functional Gain - KIF1BP ENSG00000198954 CDS Human protein_coding chr10:70775532 chr10:70775533 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26361 0 0 1 0 0 chromatin 0.438599996855253 0.438972862780382 0 0 hPsi_site_20085 iPseU_CNN:0;iRNA_PseU:0 20086 chr19 18285981 18285981 1 + G A rs59589815 18285980 + 18285960 18286000 41 GGAGCTCTTCCCAACATGGCTGTTGGTCATGGAGATCCTCA GGAGCTCTTCCCAACATGGCTATTGGTCATGGAGATCCTCA < 41bp 0.414548833809434 0.832051071051389 0.1935283 0.33935973 prediction 0.664102142102777 Functional Gain - IFI30 ENSG00000216490 CDS Human protein_coding chr19:18285980 chr19:18285981 synonymous SNV . 0 22 hPsi_associated_SNPs_26362 0 0 1 0 1 Endoplasmic reticulum 0.438716093261508 0.438713720429922 0 0 hPsi_site_20086 iPseU_CNN:0;iRNA_PseU:0 20087 chr19 34832796 34832796 1 + C A READ 34832795 + 34832775 34832815 41 ATGCAAGAGGTGATAGATTTTCTCTCGGGCTTTAACATGGG ATGCAAGAGGTGATAGATTTTATCTCGGGCTTTAACATGGG < 41bp 0.466382059383037 0.832048607884624 0.538941 0.65964645 prediction 0.664097215769248 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832795 chr19:34832796 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26363 0 0 1 0 0 Cytosol 0.438719054396065 0.438718617906251 0.2414109 0 hPsi_site_20087 iPseU_CNN:0.2414109;iRNA_PseU:0 20088 chr15 22382602 22382602 1 + C A UCEC 22382601 + 22382581 22382621 41 ATCATCCTCCCTGGAAATTTTCTCATTATTTTCACCATAAG ATCATCCTCCCTGGAAATTTTATCATTATTTTCACCATAAG < 41bp 0.518580825992305 0.850624646080685 0.23020446 0.27316803 prediction 0.66408764017676 Functional Gain - OR4N4 ENSG00000183706 CDS Human protein_coding chr15:22382601 chr15:22382602 nonsynonymous SNV 0.108 3 22 hPsi_associated_SNPs_26364 0 0 0 1 0 unknown 0.438718592998428 0.438718592995375 0 0 hPsi_site_20088 iPseU_CNN:0;iRNA_PseU:0 20089 chr5 150029783 150029783 1 + C A UCEC 150029782 + 150029762 150029802 41 GCGGTGACATCTCCCCCGTGTCTCCCTCCAGGGCGTGGTCT GCGGTGACATCTCCCCCGTGTATCCCTCCAGGGCGTGGTCT < 41bp 0.5160124216172 0.848056070306773 0.27467483 0.3296113 prediction 0.664087297379145 Functional Gain - SYNPO ENSG00000171992 CDS Human protein_coding chr5:150029782 chr5:150029783 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_26365 0 0 0 0 1 Endoplasmic reticulum 0.43871851691998 0.438723178544649 0 0 hPsi_site_20089 iPseU_CNN:0;iRNA_PseU:0 20090 chr10 93778643 93778643 1 + C A UCEC 93778642 + 93778622 93778662 41 AAAAACTGGCAGTTCAGAATTCTTCTCTACATGATATTCAA AAAAACTGGCAGTTCAGAATTATTCTCTACATGATATTCAA < 41bp 0.490566916783565 0.832040446207007 0.32128555 0.48184207 prediction 0.664080892414014 Functional Gain - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93778642 chr10:93778643 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26366 0 0 1 0 1 Nucleus 0.438889080278311 0.438461197161948 0 0 hPsi_site_20090 iPseU_CNN:0;iRNA_PseU:0 20091 chr7 143771930 143771930 1 + G A SKCM 143771929 + 143771909 143771949 41 GGCAGGGGCAGTGTCTGTGCTGGTGGGAGCCTTCTTTTCCA GGCAGGGGCAGTGTCTGTGCTAGTGGGAGCCTTCTTTTCCA < 41bp 0.550240257356849 0.882270059834464 0.2192635 0.37114143 prediction 0.664059604955231 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771929 chr7:143771930 synonymous SNV . 0 22 hPsi_associated_SNPs_26367 0 0 0 0 0 unknown 0.438718583346736 0.438718354527339 0 0 hPsi_site_20091 iPseU_CNN:0;iRNA_PseU:0 20092 chr18 8825652 8825652 1 + G A LUAD 8825651 + 8825631 8825671 41 GAGAAGGTGCAGGCCAAGTTTGAACGCACATGCTGCTCCCC GAGAAGGTGCAGGCCAAGTTTAAACGCACATGCTGCTCCCC < 41bp 0.57006223457383 0.902090379015806 0.23885521 0.329489 prediction 0.664056288883952 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8825651 chr18:8825652 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26368 0 0 1 0 0 Nucleus 0.438786346419471 0.438718617441536 0 0 hPsi_site_20092 iPseU_CNN:0;iRNA_PseU:0 20093 chr13 28713071 28713071 1 + G A UCEC 28713070 + 28713050 28713090 41 GTCCCCCTGGCTCTGGCTGGTGCACCCGTGGCCGGCTTTCC GTCCCCCTGGCTCTGGCTGGTACACCCGTGGCCGGCTTTCC < 41bp 0.449660474436598 0.832016381082487 0.35234326 0.8100352 prediction 0.664032762164974 Functional Gain - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28713070 chr13:28713071 nonsynonymous SNV 0.881 1 22 hPsi_associated_SNPs_26369 0 0 1 0 0 Ribosome 0.438718592995102 0.43871859311888 0.6200704 0 hPsi_site_20093 iPseU_CNN:0.6200704;iRNA_PseU:0 20094 chr5 134086559 134086559 1 + C A UCEC 134086558 + 134086538 134086578 41 CTATAGCAAAATGGGCGAAGTCTTCACAGATCTCTGTGTCT CTATAGCAAAATGGGCGAAGTATTCACAGATCTCTGTGTCT < 41bp 0.499699532391575 0.832015624971979 0.25714156 0.58092207 prediction 0.664031249943958 Functional Gain - CAMLG ENSG00000164615 CDS Human protein_coding chr5:134086558 chr5:134086559 synonymous SNV . 0 22 hPsi_associated_SNPs_26370 0 0 1 0 0 Nucleus 0.438720070583968 0.43873347186435 0.16184414 0 hPsi_site_20094 iPseU_CNN:0.16184414;iRNA_PseU:0 20095 chr9 139616741 139616741 1 + C T LUSC 139616742 - 139616722 139616762 41 CTGCCTGACCTTGAGGAAGCTGAGGGTCATCTCCCGGAATT CTGCCTGACCTTGAGGAAGCTAAGGGTCATCTCCCGGAATT < 41bp 0.424179223333301 0.832014864484131 0.20331728 0.6211916 prediction 0.664029728968262 Functional Gain - FAM69B ENSG00000165716 CDS Human protein_coding chr9:139616742 chr9:139616741 synonymous SNV . 0 22 hPsi_associated_SNPs_26371 0 0 1 0 0 chromatin 0.438718592969454 0.438718592405833 0.2423832 0 hPsi_site_20095 iPseU_CNN:0.2423832;iRNA_PseU:0 20096 chr19 17654161 17654161 1 + G A SKCM 17654160 + 17654140 17654180 41 CGTGGCCACCTTCCTGCAGCTGGCTGACCAGTGTCTGACGA CGTGGCCACCTTCCTGCAGCTAGCTGACCAGTGTCTGACGA < 41bp 0.425472651972497 0.832013838982439 0.27675104 0.67919916 prediction 0.664027677964878 Functional Gain - FAM129C ENSG00000167483 CDS Human protein_coding chr19:17654160 chr19:17654161 synonymous SNV . 0 22 hPsi_associated_SNPs_26372 0 0 0 0 2 exosome 0.438718592990146 0.438716868896629 0.35839832 0 hPsi_site_20096 iPseU_CNN:0.35839832;iRNA_PseU:0 20097 chr3 45943345 45943345 1 + G A LAML 45943344 + 45943324 45943364 41 GAGAGAGGGAAGCTTGAAGCTGTCGTCTATGTTGCTGGAGA GAGAGAGGGAAGCTTGAAGCTATCGTCTATGTTGCTGGAGA < 41bp 0.564554266163656 0.896567005155875 0.38028553 0.5724847 prediction 0.664025477984438 Functional Gain - CCR9 ENSG00000173585 CDS Human protein_coding chr3:45943344 chr3:45943345 synonymous SNV . 0 22 hPsi_associated_SNPs_26373 0 0 0 0 0 exosome 0.438708716569674 0.438712727830864 0.1449694 0 hPsi_site_20097 iPseU_CNN:0.1449694;iRNA_PseU:0 20098 chr19 33635774 33635774 1 + C A LUAD 33635773 + 33635753 33635793 41 CCGGTGGACGGTTCTGTGGTTCGCGATTTTGAGCACAGGCC CCGGTGGACGGTTCTGTGGTTAGCGATTTTGAGCACAGGCC < 41bp 0.533444369647452 0.865456738097803 0.412641 0.7670759 prediction 0.664024736900702 Functional Gain - WDR88 ENSG00000166359 CDS Human protein_coding chr19:33635773 chr19:33635774 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_26374 0 0 0 0 2 exosome 0.438254049481182 0.438350683568128 0.5341518 0 hPsi_site_20098 iPseU_CNN:0.5341518;iRNA_PseU:0 20099 chr11 93800867 93800867 1 + G T UCEC 93800868 - 93800848 93800888 41 TATCATCCACTTCCCAGGATTCTCGGCTATCATTTCTGTTG TATCATCCACTTCCCAGGATTATCGGCTATCATTTCTGTTG < 41bp 0.503296242505733 0.835308542251319 0.2687165 0.3283509 prediction 0.664024599491172 Functional Gain - HEPHL1 ENSG00000181333 CDS Human protein_coding chr11:93800868 chr11:93800867 nonsynonymous SNV 0.929 1 22 hPsi_associated_SNPs_26375 0 0 0 0 1 exosome 0.438698331445422 0.438731923790351 0 0 hPsi_site_20099 iPseU_CNN:0;iRNA_PseU:0 20100 chr1 159166840 159166840 1 + C T UCEC 159166841 - 159166821 159166861 41 GGAGGGCTTACCATTAACATTGAGGGTGTAGTAGGCCTTGT GGAGGGCTTACCATTAACATTAAGGGTGTAGTAGGCCTTGT < 41bp 0.559371237768994 0.891381181310399 0.25807118 0.24878407 prediction 0.664019887082809 Functional Gain - CADM3 ENSG00000162706 CDS Human protein_coding chr1:159166841 chr1:159166840 synonymous SNV . 0 22 hPsi_associated_SNPs_26376 0 0 0 0 0 exosome 0.438718593400635 0.438718592995103 0 0 hPsi_site_20100 iPseU_CNN:0;iRNA_PseU:0 20101 chr14 68191250 68191250 1 + G A SKCM 68191249 + 68191229 68191269 41 GCTTCCTGGCAAGGTAGTGGTGATCACTGGCGCCAACACGG GCTTCCTGGCAAGGTAGTGGTAATCACTGGCGCCAACACGG < 41bp 0.410877317103494 0.832007889060128 0.2560749 0.73892367 prediction 0.664015778120256 Functional Gain - RDH12 ENSG00000139988 CDS Human protein_coding chr14:68191249 chr14:68191250 synonymous SNV . 0 22 hPsi_associated_SNPs_26377 0 0 0 0 2 exosome 0.438719040080599 0.438716729972703 0.47784734 0 hPsi_site_20101 iPseU_CNN:0.47784734;iRNA_PseU:0 20102 chr16 28970370 28970370 1 + C A LUAD 28970369 + 28970349 28970389 41 GACGTCCCAACAGCTCCAGCTCCGGGTGCAGGGAAAGGAGA GACGTCCCAACAGCTCCAGCTACGGGTGCAGGGAAAGGAGA < 41bp 0.458242219721746 0.832006931598209 0.19359168 0.41630718 prediction 0.664013863196419 Functional Gain - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28970369 chr16:28970370 synonymous SNV . 0 22 hPsi_associated_SNPs_26378 0 0 1 0 2 Ribosome 0.438718593040197 0.438718533342456 0 0 hPsi_site_20102 iPseU_CNN:0;iRNA_PseU:0 20103 chr1 247751937 247751937 1 + G A SKCM 247751936 + 247751916 247751956 41 GGTAAACCTGTGGGAACCCATGAAAACTATCGCCTATGGTG GGTAAACCTGTGGGAACCCATAAAAACTATCGCCTATGGTG < 41bp 0.458326553211237 0.832003054872868 0.2342208 0.27040622 prediction 0.664006109745735 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247751936 chr1:247751937 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_26379 0 0 0 0 0 unknown 0.43871859071461 0.438718592995102 0 0 hPsi_site_20103 iPseU_CNN:0;iRNA_PseU:0 20104 chr12 49373465 49373465 1 + G A STAD 49373464 + 49373444 49373484 41 CGCCGCTGGAACTGTCCCACTGCTCCAGGGCCCCACCTCTT CGCCGCTGGAACTGTCCCACTACTCCAGGGCCCCACCTCTT < 41bp 0.420765079846704 0.831992129164046 0.20597357 0.680788 prediction 0.663984258328093 Functional Gain - WNT1 ENSG00000125084 CDS Human protein_coding chr12:49373464 chr12:49373465 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_26380 0 0 0 0 1 exosome 0.438613370081773 0.418159606304316 0.361576 0 hPsi_site_20104 iPseU_CNN:0.361576;iRNA_PseU:0 20105 chr1 2435853 2435853 1 + C A LUAD 2435852 + 2435832 2435872 41 CCTCCTCCTCCAGCATGTCATCCAGCGACACTGTCATTGAC CCTCCTCCTCCAGCATGTCATACAGCGACACTGTCATTGAC < 41bp 0.496575344687466 0.831990985292171 0.24401924 0.35371286 prediction 0.663981970584341 Functional Gain - PLCH2 ENSG00000149527 CDS Human protein_coding chr1:2435852 chr1:2435853 nonsynonymous SNV 0.024 3 22 hPsi_associated_SNPs_26381 0 0 0 0 0 nucleus 0.43871932055228 0.436017114409002 0 0 hPsi_site_20105 iPseU_CNN:0;iRNA_PseU:0 20106 chr14 81609717 81609717 1 + C A UCEC 81609716 + 81609696 81609736 41 AATGTCTTTGTCCTGCTTATTCTCCTCACCAGCCACTACAA AATGTCTTTGTCCTGCTTATTATCCTCACCAGCCACTACAA < 41bp 0.522762324676875 0.854749344366534 0.61755514 0.69693965 prediction 0.663974039379317 Functional Gain - TSHR ENSG00000165409 CDS Human protein_coding chr14:81609716 chr14:81609717 nonsynonymous SNV 0.749 0 22 hPsi_associated_SNPs_26382 0 0 0 0 0 cytosol 0.438318665943374 0.435720588839416 0.15876902 0 hPsi_site_20106 iPseU_CNN:0.15876902;iRNA_PseU:0 20107 chr22 41556696 41556696 1 + C A COAD 41556695 + 41556675 41556715 41 AGATCCAAGGGGAGAGCGTTTCTTTGGGGGATGACCCTTCC AGATCCAAGGGGAGAGCGTTTATTTGGGGGATGACCCTTCC < 41bp 0.468609752594465 0.831986559197003 0.6517108 0.69707966 prediction 0.663973118394006 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41556695 chr22:41556696 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26383 0 0 1 0 2 Cytosol 0.438718641443829 0.438718592906497 0.0907377199999999 0 hPsi_site_20107 iPseU_CNN:0.0907377199999999;iRNA_PseU:0 20108 chr6 52343876 52343876 1 + C A UCEC 52343875 + 52343855 52343895 41 CAAAGACCGCAGATTTGTCTTCTCTTACTTTCTAGCTACCG CAAAGACCGCAGATTTGTCTTATCTTACTTTCTAGCTACCG < 41bp 0.536438510502699 0.868424708295756 0.2513376 0.42856652 prediction 0.663972395586113 Functional Gain - EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52343875 chr6:52343876 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_26384 0 0 1 0 1 Cytosol 0.438725403413718 0.438719414192694 0 0 hPsi_site_20108 iPseU_CNN:0;iRNA_PseU:0 20109 chr13 27246057 27246057 1 + C A COAD 27246056 + 27246036 27246076 41 CTATACTGATCCTTCCTATTTCTTTGACCTCTGGAAAGAAA CTATACTGATCCTTCCTATTTATTTGACCTCTGGAAAGAAA < 41bp 0.474811291431784 0.831986103367424 0.41038787 0.39231545 prediction 0.663972206734848 Functional Gain - WASF3 ENSG00000132970 CDS Human protein_coding chr13:27246056 chr13:27246057 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26385 0 0 0 0 2 cytosol 0.438718592995102 0.438718592995102 0 0 hPsi_site_20109 iPseU_CNN:0;iRNA_PseU:0 20110 chr4 2673955 2673955 1 + C A STAD 2673954 + 2673934 2673974 41 CCTTCCTCCTGGCCATCAGTTCTTGAGCCCAGAGAAGCCCA CCTTCCTCCTGGCCATCAGTTATTGAGCCCAGAGAAGCCCA < 41bp 0.457735475722181 0.831984874623346 0.37734187 0.7400603 prediction 0.663969749246693 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2673954 chr4:2673955 nonsynonymous SNV 0.961 4 22 hPsi_associated_SNPs_26386 0 0 0 2 0 Cytosol 0.438718776650842 0.438714175692809 0.4801206 0 hPsi_site_20110 iPseU_CNN:0.4801206;iRNA_PseU:0 20111 chr19 13941421 13941421 1 + G A LUSC 13941420 + 13941400 13941440 41 TTCAACCAGGACAGCCACCCTGCCGTCAACGACGTGCTTTG TTCAACCAGGACAGCCACCCTACCGTCAACGACGTGCTTTG < 41bp 0.431692180168868 0.831980873653597 0.24146712 0.48634118 prediction 0.663961747307193 Functional Gain - ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13941420 chr19:13941421 nonsynonymous SNV 0.769 3 22 hPsi_associated_SNPs_26387 0 0 1 0 0 chromatin 0.438722394965037 0.438719979074384 0 0 hPsi_site_20111 iPseU_CNN:0;iRNA_PseU:0 20112 chrX 153008714 153008714 1 + G A CESC 153008713 + 153008693 153008733 41 GGATGAATGCACCAGCGCCGTGAGCATCGACGTGGAAGGCA GGATGAATGCACCAGCGCCGTAAGCATCGACGTGGAAGGCA < 41bp 0.422791874758438 0.831979148166192 0.1505638 0.4083187 prediction 0.663958296332384 Functional Gain - ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153008713 chrX:153008714 synonymous SNV . 0 22 hPsi_associated_SNPs_26388 0 0 0 0 2 nucleolus 0.438148184893348 0.435401485829417 0 0 hPsi_site_20112 iPseU_CNN:0;iRNA_PseU:0 20113 chr8 145094865 145094865 1 + G A HNSC 145094864 + 145094844 145094884 41 CGAACGAGTCCTCGAAGAAGTGGGGATCATGGCCTTGGCAC CGAACGAGTCCTCGAAGAAGTAGGGATCATGGCCTTGGCAC < 41bp 0.420391943891022 0.831973684263422 0.25570643 0.2699821 prediction 0.663947368526843 Functional Gain - SPATC1 ENSG00000186583 CDS Human protein_coding chr8:145094864 chr8:145094865 synonymous SNV . 0 22 hPsi_associated_SNPs_26389 0 0 0 0 1 chromatin 0.438718597486366 0.438722312388892 0 0 hPsi_site_20113 iPseU_CNN:0;iRNA_PseU:0 20114 chr6 17281911 17281911 1 + C A UCEC 17281910 + 17281890 17281930 41 CCTGCGCAAGTACTTCGAGGTCTTCGGCGAGATCGAGGAGG CCTGCGCAAGTACTTCGAGGTATTCGGCGAGATCGAGGAGG < 41bp 0.489762575102222 0.831972308162452 0.63204545 0.9260957 prediction 0.663944616324903 Functional Gain - RBM24 ENSG00000112183 CDS Human protein_coding chr6:17281910 chr6:17281911 synonymous SNV . 0 22 hPsi_associated_SNPs_26390 0 0 0 0 1 cytosol 0.43871859342105 0.438718601837821 0.5881005 0 hPsi_site_20114 iPseU_CNN:0.5881005;iRNA_PseU:0 20115 chr15 78567946 78567946 1 + C A UCEC 78567945 + 78567925 78567965 41 TGATCAGAAGGATCATAGTGTCTTTCAGAGACGAGGCCATG TGATCAGAAGGATCATAGTGTATTTCAGAGACGAGGCCATG < 41bp 0.533517287712399 0.865487813688566 0.3587929 0.6927378 prediction 0.663941051952333 Functional Gain - DNAJA4 ENSG00000140403 CDS Human protein_coding chr15:78567945 chr15:78567946 synonymous SNV . 0 22 hPsi_associated_SNPs_26391 0 0 0 0 0 Ribosome 0.438720357529745 0.437331014842119 0.3854756 0 hPsi_site_20115 iPseU_CNN:0.3854756;iRNA_PseU:0 20116 chr4 39482252 39482252 1 + C A UCEC 39482251 + 39482231 39482271 41 CTGGCCACACCAAAGCAGTGTCCTCCGTGAAATTCAGCCCG CTGGCCACACCAAAGCAGTGTACTCCGTGAAATTCAGCCCG < 41bp 0.50193283714399 0.833902084184048 0.19406724 0.7261065 prediction 0.663938494080116 Functional Gain - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482251 chr4:39482252 . . 0 22 hPsi_associated_SNPs_26392 0 0 0 0 0 unknown 0.438718566602538 0.438453774690011 0.452213 0 hPsi_site_20116 iPseU_CNN:0.452213;iRNA_PseU:0 20117 chr7 150839671 150839671 1 + C A UCEC 150839670 + 150839650 150839690 41 CAATGCCCTCGCCAACAGCGTCTGGGAGGGGGCCTTGGGTG CAATGCCCTCGCCAACAGCGTATGGGAGGGGGCCTTGGGTG < 41bp 0.538815805787639 0.870775847834962 0.40731525 0.7413041 prediction 0.663920084094645 Functional Gain - AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150839670 chr7:150839671 synonymous SNV . 0 22 hPsi_associated_SNPs_26393 0 0 1 0 1 Cytosol 0.43975763438209 0.438752535153412 0.4826082 0 hPsi_site_20117 iPseU_CNN:0.4826082;iRNA_PseU:0 20118 chr16 2018561 2018561 1 + G A SKCM 2018560 + 2018540 2018580 41 TGCACCTCGCAGGTGCCGCGTGGGACCCTGGCAGAGCACCG TGCACCTCGCAGGTGCCGCGTAGGACCCTGGCAGAGCACCG < 41bp 0.421373045846854 0.831956227904608 0.1717704 0.3134788 prediction 0.663912455809216 Functional Gain - RNF151 ENSG00000179580 CDS Human protein_coding chr16:2018560 chr16:2018561 nonsynonymous SNV 0.020 1 22 hPsi_associated_SNPs_26394 0 0 0 0 0 nucleus 0.438714516755464 0.4386330207628 0 0 hPsi_site_20118 iPseU_CNN:0;iRNA_PseU:0 20119 chr14 90730103 90730103 1 + C A UCEC 90730102 + 90730082 90730122 41 ATCATGCCATCGTGTCTACATCTGTGGGCTCAGAACACTAC ATCATGCCATCGTGTCTACATATGTGGGCTCAGAACACTAC < 41bp 0.534724644311938 0.866678910755816 0.25314718 0.26757276 prediction 0.663908532887756 Functional Gain - PSMC1 ENSG00000100764 CDS Human protein_coding chr14:90730102 chr14:90730103 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_26395 0 0 0 0 2 Ribosome 0.438699626051539 0.438703378566491 0 0 hPsi_site_20119 iPseU_CNN:0;iRNA_PseU:0 20120 chr9 37861483 37861483 1 + C A UCEC 37861482 + 37861462 37861502 41 GGTGCCTTAGTGGACGGGTTTCTTTGTATCAGCCAAAGTTT GGTGCCTTAGTGGACGGGTTTATTTGTATCAGCCAAAGTTT < 41bp 0.497971677668309 0.831944996330202 0.24068937 0.25210387 prediction 0.663889992660404 Functional Gain - DCAF10 ENSG00000122741 CDS Human protein_coding chr9:37861482 chr9:37861483 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26396 0 0 1 0 0 Ribosome 0.4387185929951 0.43871859299522 0 0 hPsi_site_20120 iPseU_CNN:0;iRNA_PseU:0 20121 chr19 49469933 49469933 1 + G A UCEC 49469932 + 49469912 49469952 41 ACCAACCTCCACAGGCTGGGTGGCCCGGAGGCTGGGCTGGG ACCAACCTCCACAGGCTGGGTAGCCCGGAGGCTGGGCTGGG < 41bp 0.537295429841604 0.869239176935109 0.13904029 0.24695274 prediction 0.66388749418701 Functional Gain - FTL ENSG00000087086 CDS Human protein_coding chr19:49469932 chr19:49469933 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26397 0 0 1 0 1 Cytosol 0.438717207338142 0.438718616034154 0 0 hPsi_site_20121 iPseU_CNN:0;iRNA_PseU:0 20122 chr1 248551352 248551352 1 + C A UCEC 248551351 + 248551331 248551371 41 GCTGGATGATCCTGGCCAGCTCTTGGTTCGGTGGGGCTTTG GCTGGATGATCCTGGCCAGCTATTGGTTCGGTGGGGCTTTG < 41bp 0.502205073464277 0.834148755453064 0.58180404 0.75161225 prediction 0.663887363977574 Functional Gain - OR2T6 ENSG00000198104 CDS Human protein_coding chr1:248551351 chr1:248551352 nonsynonymous SNV 0.353 3 22 hPsi_associated_SNPs_26398 0 0 0 0 0 unknown 0.437959615174053 0.4390914229159 0.33961642 0 hPsi_site_20122 iPseU_CNN:0.33961642;iRNA_PseU:0 20123 chr1 41467893 41467893 1 + G A COAD 41467892 + 41467872 41467912 41 GAAGGAAAAATCCAAGCAATTGCCTGGGCTCGGAATCAGAA GAAGGAAAAATCCAAGCAATTACCTGGGCTCGGAATCAGAA < 41bp 0.562886081097909 0.8948234583486 0.3035913 0.46319067 prediction 0.663874754501382 Functional Gain - CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41467892 chr1:41467893 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_26399 0 0 1 0 2 Nucleus 0.438718387788979 0.438709149515779 0 0 hPsi_site_20123 iPseU_CNN:0;iRNA_PseU:0 20124 chr12 77220770 77220770 1 + C A UCEC 77220769 + 77220749 77220789 41 TAGCAGACCTAAATATTGATTCTTGGCTCATTAAAGGGCTA TAGCAGACCTAAATATTGATTATTGGCTCATTAAAGGGCTA < 41bp 0.477991486613011 0.831920857770854 0.5081437 0.6117796 prediction 0.663841715541707 Functional Gain - ZDHHC17 ENSG00000186908 CDS Human protein_coding chr12:77220769 chr12:77220770 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26400 0 0 1 0 1 Endoplasmic reticulum 0.438720922888443 0.437389080474258 0.2072718 0 hPsi_site_20124 iPseU_CNN:0.2072718;iRNA_PseU:0 20125 chr17 25630610 25630610 1 + C A GBM 25630609 + 25630589 25630629 41 TTTGGACAAGATCAGCTACTTCTTGCTACAGGGTTGAACAA TTTGGACAAGATCAGCTACTTATTGCTACAGGGTTGAACAA < 41bp 0.495485617775272 0.83192055130764 0.26657942 0.29263383 prediction 0.663841102615279 Functional Gain - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25630609 chr17:25630610 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26401 0 0 1 4 1 Cytosol 0.438710109169912 0.438737531133306 0 0 hPsi_site_20125 iPseU_CNN:0;iRNA_PseU:0 20126 chr12 125478390 125478390 1 + G A rs542177790 125478389 + 125478369 125478409 41 CCGGGCCGGGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGC CCGGGCCGGGCTCCTGCTGCTACTGCTGCTGCTGCTGCTGC < 41bp 0.539077203179867 0.870997611531771 0.689424 0.8155838 prediction 0.663840816703808 Functional Gain - BRI3BP ENSG00000184992 CDS Human protein_coding chr12:125478389 chr12:125478390 synonymous SNV . 0 22 hPsi_associated_SNPs_26402 0 0 1 0 0 Ribosome 0.43871883205456 0.438718626906934 0.2523196 0 hPsi_site_20126 iPseU_CNN:0.2523196;iRNA_PseU:0 20127 chr10 69648737 69648737 1 + G A LUAD 69648736 + 69648716 69648756 41 AACAATACCTCCACCTGAGTTGGATGATATGACACTGTGGC AACAATACCTCCACCTGAGTTAGATGATATGACACTGTGGC < 41bp 0.42701740365902 0.831916625417229 0.16324678 0.3143084 prediction 0.663833250834459 Functional Gain - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69648736 chr10:69648737 synonymous SNV . 0 22 hPsi_associated_SNPs_26403 0 0 1 0 1 Cytosol 0.439741473769659 0.439003021747472 0 0 hPsi_site_20127 iPseU_CNN:0;iRNA_PseU:0 20128 chr17 263004 263004 1 + C A PAAD 263003 + 262983 263023 41 TCCTTTCATGACATCTTAAGTCCTTGCAAAGAGCGTGGCCC TCCTTTCATGACATCTTAAGTACTTGCAAAGAGCGTGGCCC < 41bp 0.516256947193886 0.848172266618898 0.26258197 0.46758223 prediction 0.663830638850023 Functional Gain - C17orf97 ENSG00000187624 CDS Human protein_coding chr17:263003 chr17:263004 nonsynonymous SNV 0.608 3 22 hPsi_associated_SNPs_26404 0 0 0 0 1 exosome 0.438524320303443 0.438073308744174 0 0 hPsi_site_20128 iPseU_CNN:0;iRNA_PseU:0 20129 chr11 129312747 129312747 1 + C A UCEC 129312746 + 129312726 129312766 41 CTAGGTTGGACTTGGCTCAGTCTCTGGGACTCACTCAGCTG CTAGGTTGGACTTGGCTCAGTATCTGGGACTCACTCAGCTG < 41bp 0.459376384625973 0.831913143188142 0.3401928 0.64982927 prediction 0.663826286376284 Functional Gain - BARX2 ENSG00000043039 CDS Human protein_coding chr11:129312746 chr11:129312747 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_26405 0 0 1 0 2 exosome 0.438197069481804 0.43874312406241 0.29965854 0 hPsi_site_20129 iPseU_CNN:0.29965854;iRNA_PseU:0 20130 chr1 46972824 46972824 1 + G A BLCA 46972823 + 46972803 46972843 41 GTGCATGCGCTTACATTGGCTGAGCGCCTGGCTGGTAAGGG GTGCATGCGCTTACATTGGCTAAGCGCCTGGCTGGTAAGGG < 41bp 0.445065115162682 0.831908360989222 0.3065198 0.8551023 prediction 0.663816721978443 Functional Gain - DMBX1 ENSG00000197587 CDS Human protein_coding chr1:46972823 chr1:46972824 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_26406 0 0 0 0 1 nucleolus 0.438633978499911 0.43894593185486 0.7102046 0 hPsi_site_20130 iPseU_CNN:0.7102046;iRNA_PseU:0 20131 chr16 84792359 84792359 1 + G A SKCM 84792358 + 84792338 84792378 41 AACCCTAATCCATAAACCAGTGTCGTTGCAACCCCGTGGGC AACCCTAATCCATAAACCAGTATCGTTGCAACCCCGTGGGC < 41bp 0.568389458648245 0.900293519709741 0.53211623 0.9454559 prediction 0.663808122122992 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84792358 chr16:84792359 synonymous SNV . 0 22 hPsi_associated_SNPs_26407 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592995083 0.82667934 0 hPsi_site_20131 iPseU_CNN:0.82667934;iRNA_PseU:0 20132 chr19 57870182 57870182 1 + G A rs55969306 57870181 + 57870161 57870201 41 CTTGTGGAAGCAACATAAGTTGGGTCCCTTAACTGTCACGT CTTGTGGAAGCAACATAAGTTAGGTCCCTTAACTGTCACGT < 41bp 0.467364636094199 0.831900727362583 0.40207618 0.54097265 prediction 0.663801454725166 Functional Gain - ZNF304 ENSG00000131845 UTR3 Human protein_coding chr19:57870181 chr19:57870182 . . 0 22 hPsi_associated_SNPs_26408 0 0 1 1 0 chromatin 0.429820928255825 0.438367366642502 0.0819453000000001 0 hPsi_site_20132 iPseU_CNN:0.0819453000000001;iRNA_PseU:0 20133 chrX 115304402 115304402 1 + G A UCEC 115304401 + 115304381 115304421 41 GGATGGGTGTCATTAATAGCTGCGAAGTTATAGCAGTCATT GGATGGGTGTCATTAATAGCTACGAAGTTATAGCAGTCATT < 41bp 0.438825765165715 0.83189953286215 0.16495338 0.22088611 prediction 0.6637990657243 Functional Gain - AGTR2 ENSG00000180772 CDS Human protein_coding chrX:115304401 chrX:115304402 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26409 0 0 0 0 0 unknown 0.438714869714498 0.438719434185858 0 0 hPsi_site_20133 iPseU_CNN:0;iRNA_PseU:0 20134 chr6 26505209 26505209 1 + C A UCEC 26505208 + 26505188 26505228 41 CAAGAGAATGGAGAAATCTGTCTGGAGTGCACCTCAGTGGG CAAGAGAATGGAGAAATCTGTATGGAGTGCACCTCAGTGGG < 41bp 0.534064150733027 0.865957436657582 0.59237826 0.775573 prediction 0.663786571849109 Functional Gain - BTN1A1 ENSG00000124557 CDS Human protein_coding chr6:26505208 chr6:26505209 nonsynonymous SNV 0.487 4 22 hPsi_associated_SNPs_26410 0 0 0 0 1 nucleoplasm 0.439568377505157 0.438718265959302 0.36638948 0 hPsi_site_20134 iPseU_CNN:0.36638948;iRNA_PseU:0 20135 chr11 55606398 55606398 1 + G A LUSC 55606397 + 55606377 55606417 41 CATCAAAATTAACCCAAAATTGCATACCCCCATGTATTTTT CATCAAAATTAACCCAAAATTACATACCCCCATGTATTTTT < 41bp 0.540846087635184 0.872732735482571 0.31317276 0.6087689 prediction 0.663773295694774 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606397 chr11:55606398 synonymous SNV . 0 22 hPsi_associated_SNPs_26411 0 0 0 0 0 unknown 0.438718676182483 0.438720224416065 0.2175378 0 hPsi_site_20135 iPseU_CNN:0.2175378;iRNA_PseU:0 20136 chr5 54320586 54320586 1 + G A UCEC 54320585 + 54320565 54320605 41 GGACATCACGTTTGTGGAGGTGTTCTGATTGATCCACAGTG GGACATCACGTTTGTGGAGGTATTCTGATTGATCCACAGTG < 41bp 0.451097697240162 0.831882134933641 0.40152568 0.72252053 prediction 0.663764269867282 Functional Gain - GZMK ENSG00000113088 CDS Human protein_coding chr5:54320585 chr5:54320586 nonsynonymous SNV 0.943 1 22 hPsi_associated_SNPs_26412 0 0 0 0 2 exosome 0.438736927183284 0.438826413742938 0.44504106 0 hPsi_site_20136 iPseU_CNN:0.44504106;iRNA_PseU:0 20137 chr14 90650888 90650888 1 + C A UCEC 90650887 + 90650867 90650907 41 CCACTATGAGAGCCAAGGCCTCTATCGCTTTGCCAACTTCG CCACTATGAGAGCCAAGGCCTATATCGCTTTGCCAACTTCG < 41bp 0.528882177479023 0.860753506941019 0.34577864 0.622791 prediction 0.663742658923993 Functional Gain - KCNK13 ENSG00000152315 CDS Human protein_coding chr14:90650887 chr14:90650888 synonymous SNV . 0 22 hPsi_associated_SNPs_26413 0 0 0 0 0 exosome 0.438718593781218 0.438718592996778 0.245582 0 hPsi_site_20137 iPseU_CNN:0.245582;iRNA_PseU:0 Highest math class taken (MTAG) 20138 chr11 113230696 113230696 1 + C A CHOL 113230695 + 113230675 113230715 41 AGGTGAGCAGAAGGTGCCTGTCTTTACTAAACAGCCAGGAT AGGTGAGCAGAAGGTGCCTGTATTTACTAAACAGCCAGGAT < 41bp 0.459107825818632 0.831871200993363 0.15530613 0.28486913 prediction 0.663742401986726 Functional Gain - TTC12 ENSG00000149292 CDS Human protein_coding chr11:113230695 chr11:113230696 nonsynonymous SNV 0.130 1 22 hPsi_associated_SNPs_26414 0 0 0 0 2 cytosol 0.438718593025675 0.438718594082589 0 0 hPsi_site_20138 iPseU_CNN:0;iRNA_PseU:0 20139 chr2 74782350 74782350 1 + G A CESC 74782349 + 74782329 74782369 41 GTAGCGCGGCTCGAGTTCTTTGACCATAAGGGGTCGAGCTC GTAGCGCGGCTCGAGTTCTTTAACCATAAGGGGTCGAGCTC < 41bp 0.558539979656863 0.89040500201995 0.32496846 0.5587061 prediction 0.663730044726175 Functional Gain - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74782349 chr2:74782350 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_26415 0 0 0 0 1 Cytosol 0.442057878951285 0.438717623115108 0.1174122 0 hPsi_site_20139 iPseU_CNN:0.1174122;iRNA_PseU:0 20140 chr16 11003010 11003010 1 + G A UCEC 11003009 + 11002989 11003029 41 AAAGCCAAGTCCCTGAAGGATGTGGAAGACCTGGGAAAGCT AAAGCCAAGTCCCTGAAGGATATGGAAGACCTGGGAAAGCT < 41bp 0.42255209263321 0.831860636716024 0.32717752 0.46690357 prediction 0.663721273432047 Functional Gain - CIITA ENSG00000179583 CDS Human protein_coding chr16:11003009 chr16:11003010 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_26416 0 0 0 0 1 Nucleus 0.438718592994589 0.438718592994592 0 0 hPsi_site_20140 iPseU_CNN:0;iRNA_PseU:0 20141 chr20 3804572 3804572 1 + G A rs138798757 3804571 + 3804551 3804591 41 GGCATCTGGCCGGCCCCCCATGGACCTGCAGCCGCAATCCT GGCATCTGGCCGGCCCCCCATAGACCTGCAGCCGCAATCCT < 41bp 0.568474368109198 0.900334093152387 0.29331344 0.32382917 prediction 0.663719450086378 Functional Gain - AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3804571 chr20:3804572 nonsynonymous SNV 0.908 0 22 hPsi_associated_SNPs_26417 0 0 0 0 2 Ribosome 0.438718592960852 0.438718590662327 0 0 hPsi_site_20141 iPseU_CNN:0;iRNA_PseU:0 20142 chr7 116593650 116593650 1 + C A UCEC 116593649 + 116593629 116593669 41 TCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACC TCAAGTCCTGCATAGTTTGGTATTGGACGTATCTGTGGACC < 41bp 0.513813492000083 0.845673137007261 0.61328715 0.9065208 prediction 0.663719290014356 Functional Gain - ST7 ENSG00000004866 CDS Human protein_coding chr7:116593649 chr7:116593650 nonsynonymous SNV 0.976 3 22 hPsi_associated_SNPs_26418 0 0 1 0 1 Cytosol 0.438718624922307 0.438718599879121 0.5864673 0 hPsi_site_20142 iPseU_CNN:0.5864673;iRNA_PseU:0 20143 chr11 124440468 124440468 1 + C A OV 124440467 + 124440447 124440487 41 GGTGGCTGTGGTCTACGCCATCGGACTCATTGGCTCCACAA GGTGGCTGTGGTCTACGCCATAGGACTCATTGGCTCCACAA < 41bp 0.51277015030752 0.844614324790728 0.18893254 0.3051213 prediction 0.663688348966416 Functional Gain - OR8A1 ENSG00000196119 CDS Human protein_coding chr11:124440467 chr11:124440468 synonymous SNV . 0 22 hPsi_associated_SNPs_26419 0 0 0 0 0 exosome 0.438718799755856 0.436178427153058 0 0 hPsi_site_20143 iPseU_CNN:0;iRNA_PseU:0 20144 chr2 9576418 9576418 1 + G A UCEC 9576417 + 9576397 9576437 41 TGTAACACTGTCCACGATATTGTAAACAGAGGAGGCAGGGG TGTAACACTGTCCACGATATTATAAACAGAGGAGGCAGGGG < 41bp 0.567858762807536 0.899690206421266 0.22185403 0.27410826 prediction 0.66366288722746 Functional Gain - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9576417 chr2:9576418 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_26420 0 0 1 0 2 Nucleus 0.438648926150937 0.438408207385905 0 0 hPsi_site_20144 iPseU_CNN:0;iRNA_PseU:0 20145 chr11 55322422 55322422 1 + C A rs74331841 55322421 + 55322401 55322441 41 TTGCATTCCATGATACAAATTCTTTTTACTTTCCAGCTTCC TTGCATTCCATGATACAAATTATTTTTACTTTCCAGCTTCC < 41bp 0.50755501250572 0.839380944751582 0.32532924 0.42651904 prediction 0.663651864491724 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322421 chr11:55322422 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_26421 0 0 0 0 0 unknown 0.438719286221623 0.438720534791144 0 0 hPsi_site_20145 iPseU_CNN:0;iRNA_PseU:0 20146 chr1 156902313 156902313 1 + G A SKCM 156902312 + 156902292 156902332 41 GAGTGCATCCAAGGGTCCAGTGGGGCTGCTGTGGCTGTCCC GAGTGCATCCAAGGGTCCAGTAGGGCTGCTGTGGCTGTCCC < 41bp 0.41680742411661 0.831821520077005 0.15979487 0.40949705 prediction 0.663643040154009 Functional Gain - LRRC71 ENSG00000160838 CDS Human protein_coding chr1:156902312 chr1:156902313 synonymous SNV . 0 22 hPsi_associated_SNPs_26422 0 0 0 0 2 exosome 0.438718657640982 0.438718660313651 0 0 hPsi_site_20146 iPseU_CNN:0;iRNA_PseU:0 20147 chr7 128845217 128845217 1 + C A rs146006039 128845216 + 128845196 128845236 41 GCACAGCTACATCGCGGCCTTCGGGGCCGTCACGGGCCTCT GCACAGCTACATCGCGGCCTTAGGGGCCGTCACGGGCCTCT < 41bp 0.535663555793807 0.867484282515475 0.31272757 0.46946746 prediction 0.663641453443336 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128845216 chr7:128845217 nonsynonymous SNV 0.714 1 22 hPsi_associated_SNPs_26423 0 0 0 0 1 cytosol 0.438788431022312 0.455148761913928 0 0 hPsi_site_20147 iPseU_CNN:0;iRNA_PseU:0 20148 chr11 65631160 65631160 1 + G A UCEC 65631159 + 65631139 65631179 41 TGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAAT TGCACGTTGGAGATTTTGTGTAGGTGGCCCAGGAGACCAAT < 41bp 0.418459236973642 0.831819568042395 0.31497526 0.5568631 prediction 0.66363913608479 Functional Gain - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631159 chr11:65631160 stopgain 0.996 1 22 hPsi_associated_SNPs_26424 0 0 1 0 2 Ribosome 0.438718593148153 0.43871855016697 0.1137262 0 hPsi_site_20148 iPseU_CNN:0.1137262;iRNA_PseU:0 20149 chr3 47385236 47385236 1 + G A UCEC 47385235 + 47385215 47385255 41 GTGGTGCCTGATTGTCCCCATGCACACGCGCAGGAGCCGGG GTGGTGCCTGATTGTCCCCATACACACGCGCAGGAGCCGGG < 41bp 0.426211861780282 0.831810818082806 0.2567907 0.38896945 prediction 0.663621636165612 Functional Gain - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385235 chr3:47385236 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_26425 0 0 1 0 0 Cytosol 0.438403765703201 0.437431598439224 0 0 hPsi_site_20149 iPseU_CNN:0;iRNA_PseU:0 20150 chr2 242099822 242099822 1 + C A READ 242099821 + 242099801 242099841 41 GACACGACTGAAAAAACTCTTCTTGGTCAACAATAAAATCA GACACGACTGAAAAAACTCTTATTGGTCAACAATAAAATCA < 41bp 0.527168246255926 0.858978750855581 0.25905308 0.3055081 prediction 0.66362100919931 Functional Gain - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242099821 chr2:242099822 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26426 0 0 1 0 2 Ribosome 0.438547833516184 0.438696116086905 0 0 hPsi_site_20150 iPseU_CNN:0;iRNA_PseU:0 20151 chr2 239039101 239039101 1 + G A rs138066160 239039100 + 239039080 239039120 41 GTCTGCGGAGGCCTCAGAGGTGGCCCCCGGGGTGCAGCCCC GTCTGCGGAGGCCTCAGAGGTAGCCCCCGGGGTGCAGCCCC < 41bp 0.560290102143372 0.8920986956313 0.17985293 0.38264397 prediction 0.663617186975854 Functional Gain - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239039100 chr2:239039101 synonymous SNV . 0 22 hPsi_associated_SNPs_26427 0 0 0 0 0 exosome 0.438720025974719 0.438306449713301 0 0 hPsi_site_20151 iPseU_CNN:0;iRNA_PseU:0 20152 chr15 75189976 75189976 1 + G A STAD 75189975 + 75189955 75189995 41 ACACCAATCCCTCTGCAACGTGGTGGCGTGCTCTTCATTGG ACACCAATCCCTCTGCAACGTAGTGGCGTGCTCTTCATTGG < 41bp 0.421210584485326 0.831808044304969 0.20632637 0.2529437 prediction 0.663616088609938 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75189975 chr15:75189976 nonsynonymous SNV 0.386 5 22 hPsi_associated_SNPs_26428 0 0 1 0 0 Ribosome 0.437252968126755 0.438875389738744 0 0 hPsi_site_20152 iPseU_CNN:0;iRNA_PseU:0 20153 chr1 207300220 207300220 1 + C A OV 207300219 + 207300199 207300239 41 CTGATAGCAAATGGAATCCTTCTCCTCCTGCTTGTGAGCCC CTGATAGCAAATGGAATCCTTATCCTCCTGCTTGTGAGCCC < 41bp 0.519087492230433 0.8508954861175 0.19358039 0.24687386 prediction 0.663615987774134 Functional Gain - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207300219 chr1:207300220 nonsynonymous SNV 0.723 3 22 hPsi_associated_SNPs_26429 0 0 0 0 1 Endoplasmic reticulum 0.438708255121584 0.438716671895506 0 0 hPsi_site_20153 iPseU_CNN:0;iRNA_PseU:0 20154 chr7 105672861 105672861 1 + C A UCEC 105672860 + 105672840 105672880 41 GACCGGGGAAACATATGAATTCAACTCAAAAACTGGAGCCA GACCGGGGAAACATATGAATTAAACTCAAAAACTGGAGCCA < 41bp 0.490005803348198 0.831798868227579 0.2577858 0.31111464 prediction 0.663597736455159 Functional Gain - CDHR3 ENSG00000128536 CDS Human protein_coding chr7:105672860 chr7:105672861 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26430 0 0 1 2 1 cytosol 0.438705401575797 0.438716852667656 0 0 hPsi_site_20154 iPseU_CNN:0;iRNA_PseU:0 20155 chr17 26817540 26817540 1 + G A SKCM 26817539 + 26817519 26817559 41 GCTGCTGGTGGCCATCGCGGTGGAACACTGGAACCTGCATA GCTGCTGGTGGCCATCGCGGTAGAACACTGGAACCTGCATA < 41bp 0.406720222603388 0.831793307882658 0.5143443 0.8693391 prediction 0.663586615765316 Functional Gain - SLC13A2 ENSG00000007216 CDS Human protein_coding chr17:26817539 chr17:26817540 synonymous SNV . 0 22 hPsi_associated_SNPs_26431 0 0 0 0 2 unknown 0.438718586326271 0.438718553867232 0.7099896 0 hPsi_site_20155 iPseU_CNN:0.7099896;iRNA_PseU:0 20156 chr11 5664614 5664614 1 + G A rs148270580 5664613 + 5664593 5664633 41 TGAAGTATGTTGTTAGAAGATGTGCAAATCGTCAAAATCTT TGAAGTATGTTGTTAGAAGATATGCAAATCGTCAAAATCTT < 41bp 0.552585996901215 0.884378080380341 0.2728778 0.48536098 prediction 0.663584166958251 Functional Gain - TRIM34;TRIM6-TRIM34 ENSG00000258588;ENSG00000258659 CDS Human other chr11:5664613 chr11:5664614 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26432 0 0 0 0 0 unknown 0.439070775269125 0.438774603949338 0 0 hPsi_site_20156 iPseU_CNN:0;iRNA_PseU:0 20157 chr20 32664926 32664926 1 + G A rs2281209 32664925 + 32664905 32664945 41 AGTGGTGGTGGCGGTGGCGGTGGCAGCAGCCGGCCACCAGC AGTGGTGGTGGCGGTGGCGGTAGCAGCAGCCGGCCACCAGC < 41bp 0.417978722563885 0.831791848778941 0.28354383 0.72241515 prediction 0.663583697557881 Functional Gain - RALY ENSG00000125970 CDS Human protein_coding chr20:32664925 chr20:32664926 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_26433 0 0 1 0 1 Cytosol 0.438717804540819 0.438719456009208 0.4448303 0 hPsi_site_20157 iPseU_CNN:0.4448303;iRNA_PseU:0 20158 chr17 41020460 41020460 1 + G A SKCM 41020459 + 41020439 41020479 41 CGGTACATAGATAGTGGCTTTGGCTTGGGCCACTTCTCCAC CGGTACATAGATAGTGGCTTTAGCTTGGGCCACTTCTCCAC < 41bp 0.470295920665149 0.83179165605093 0.4166824 0.86275744 prediction 0.66358331210186 Functional Gain - AOC4P ENSG00000260105 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:41020459 chr17:41020460 . . 0 22 hPsi_associated_SNPs_26434 0 0 0 0 0 unknown 0.438718835110275 0.438717686420372 0.72551488 0 hPsi_site_20158 iPseU_CNN:0.72551488;iRNA_PseU:0 20159 chr22 50356707 50356707 1 + G A BRCA 50356706 + 50356686 50356726 41 GGGGGCGTCCCGGAGAGCTGTGACCTGCGGCTGTGCACCCT GGGGGCGTCCCGGAGAGCTGTAACCTGCGGCTGTGCACCCT < 41bp 0.558922491590591 0.890710896915621 0.2640276 0.6299156 prediction 0.663576810650061 Functional Gain - PIM3 ENSG00000198355 CDS Human protein_coding chr22:50356706 chr22:50356707 nonsynonymous SNV 0.764 1 22 hPsi_associated_SNPs_26435 0 0 1 0 0 Ribosome 0.43871882934928 0.438718593809746 0.2598312 0 hPsi_site_20159 iPseU_CNN:0.2598312;iRNA_PseU:0 20160 chr17 62080179 62080179 1 + C T PAAD 62080180 - 62080160 62080200 41 CTTCATCTTCGGCCAGCACTTGCGCCAGCAGCGGATGGGCA CTTCATCTTCGGCCAGCACTTACGCCAGCAGCGGATGGGCA < 41bp 0.559309914415337 0.891091492321787 0.2834755 0.51859003 prediction 0.663563155812899 Functional Gain - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62080180 chr17:62080179 synonymous SNV . 0 22 hPsi_associated_SNPs_26436 0 0 1 0 0 Endoplasmic reticulum 0.439470630039982 0.434653055740083 0.0371800600000001 0 hPsi_site_20160 iPseU_CNN:0.0371800600000001;iRNA_PseU:0 20161 chr15 75501041 75501041 1 + G A UCEC 75501040 + 75501020 75501060 41 GCTGTCGGAGGAGCGGGCACTGCGGGAGCTCGCCCTGCCAG GCTGTCGGAGGAGCGGGCACTACGGGAGCTCGCCCTGCCAG < 41bp 0.553794004873294 0.885571787551809 0.35073155 0.6424717 prediction 0.66355556535703 Functional Gain - C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75501040 chr15:75501041 synonymous SNV . 0 22 hPsi_associated_SNPs_26437 0 0 1 0 0 Cytosol 0.438718592994693 0.438718592691516 0.2849434 0 hPsi_site_20161 iPseU_CNN:0.2849434;iRNA_PseU:0 20162 chr20 5904110 5904110 1 + C A BLCA 5904109 + 5904089 5904129 41 CACCAGAGAAGAGAAAAGGTTCTTGGGTGAAGGACACCACC CACCAGAGAAGAGAAAAGGTTATTGGGTGAAGGACACCACC < 41bp 0.472371705698275 0.831768405215488 0.3455277 0.5482828 prediction 0.663536810430977 Functional Gain - CHGB ENSG00000089199 CDS Human protein_coding chr20:5904109 chr20:5904110 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_26438 0 0 0 0 0 exosome 0.438797179489491 0.438721092658889 0.0965655999999999 0 hPsi_site_20162 iPseU_CNN:0.0965655999999999;iRNA_PseU:0 20163 chr12 52282419 52282419 1 + G A UCEC 52282418 + 52282398 52282438 41 GGAAGAGGAAGAGCTGGCATTGCACAGGAGACGGCTGGACA GGAAGAGGAAGAGCTGGCATTACACAGGAGACGGCTGGACA < 41bp 0.563636361089225 0.895403395707962 0.23552269 0.46588066 prediction 0.663534069237475 Functional Gain - ANKRD33 ENSG00000167612 CDS Human protein_coding chr12:52282418 chr12:52282419 synonymous SNV . 0 22 hPsi_associated_SNPs_26439 0 0 0 0 1 unknown 0.438421044660492 0.435843485949215 0 0 hPsi_site_20163 iPseU_CNN:0;iRNA_PseU:0 20164 chr3 42906297 42906297 1 + C A UCEC 42906296 + 42906276 42906316 41 GTTTCTGGTGACACTGCCCTTCTGGGGCATCTCCGTGGCCT GTTTCTGGTGACACTGCCCTTATGGGGCATCTCCGTGGCCT < 41bp 0.516629177999223 0.848389998173507 0.6878777 0.6477948 prediction 0.663521640348568 Functional Gain - ACKR2 ENSG00000144648 CDS Human protein_coding chr3:42906296 chr3:42906297 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26440 0 0 0 0 0 Nucleus 0.438718326098547 0.438674900645946 0 0 hPsi_site_20164 iPseU_CNN:0;iRNA_PseU:0 20165 chr2 219736229 219736229 1 + G A STAD 219736228 + 219736208 219736248 41 CATTCGGGAGACGGCCTTCGTGTTCGCCATCACTGCGGCCG CATTCGGGAGACGGCCTTCGTATTCGCCATCACTGCGGCCG < 41bp 0.563334113562195 0.89508826502723 0.42437035 0.7686242 prediction 0.66350830293007 Functional Gain - WNT6 ENSG00000115596 CDS Human protein_coding chr2:219736228 chr2:219736229 synonymous SNV . 0 22 hPsi_associated_SNPs_26441 0 0 0 0 1 exosome 0.438704804050959 0.438731259209435 0.5372484 0 hPsi_site_20165 iPseU_CNN:0.5372484;iRNA_PseU:0 20166 chr15 32917327 32917327 1 + G A CESC 32917326 + 32917306 32917346 41 AGCAATCTTGCAGTAATATTTGCACCGAATCTTCTTCAGAC AGCAATCTTGCAGTAATATTTACACCGAATCTTCTTCAGAC < 41bp 0.434143521688628 0.831749781899171 0.3416232 0.6280559 prediction 0.663499563798342 Functional Gain - ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32917326 chr15:32917327 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26442 0 0 1 0 1 Ribosome 0.43188677232399 0.435558296822978 0.2561118 0 hPsi_site_20166 iPseU_CNN:0.2561118;iRNA_PseU:0 20167 chr14 21961063 21961063 1 + G A ESCA 21961062 + 21961042 21961082 41 GTGTTGCAGGCAGCAGCAGCTGCTGCTGCTGCTGCTTCTAT GTGTTGCAGGCAGCAGCAGCTACTGCTGCTGCTGCTTCTAT < 41bp 0.417959846102939 0.831749586021438 0.31493893 0.57275915 prediction 0.663499172042876 Functional Gain - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961062 chr14:21961063 nonsynonymous SNV 0.948 1 22 hPsi_associated_SNPs_26443 0 0 1 0 0 Ribosome 0.436395222363551 0.438377185148953 0.1455183 0 hPsi_site_20167 iPseU_CNN:0.1455183;iRNA_PseU:0 20168 chr17 48918374 48918374 1 + G A STAD 48918373 + 48918353 48918393 41 CCTCAAGGAGTTTCTTGGCTTGCACTGAAGCCCCCCACCCC CCTCAAGGAGTTTCTTGGCTTACACTGAAGCCCCCCACCCC < 41bp 0.563097779405276 0.894846674520226 0.32764742 0.79628384 prediction 0.6634977902299 Functional Gain - WFIKKN2 ENSG00000173714 CDS Human protein_coding chr17:48918373 chr17:48918374 synonymous SNV . 0 22 hPsi_associated_SNPs_26444 0 0 0 0 0 exosome 0.43871859299396 0.438718592977942 0.59256768 0 hPsi_site_20168 iPseU_CNN:0.59256768;iRNA_PseU:0 20169 chr1 53068201 53068201 1 + G A rs139200335 53068200 + 53068180 53068220 41 CCGGGGCAAACTGGTGTCGCTGGAGAAGTACCGCGGATCGG CCGGGGCAAACTGGTGTCGCTAGAGAAGTACCGCGGATCGG < 41bp 0.556604339558794 0.888347056234743 0.36825982 0.6230955 prediction 0.663485433351898 Functional Gain - GPX7 ENSG00000116157 CDS Human protein_coding chr1:53068200 chr1:53068201 synonymous SNV . 0 22 hPsi_associated_SNPs_26445 0 0 0 0 1 exosome 0.438718595057172 0.438718593088147 0.246191 0 hPsi_site_20169 iPseU_CNN:0.246191;iRNA_PseU:0 20170 chr17 7259350 7259350 1 + C A UCEC 7259349 + 7259329 7259369 41 TCCTTGTCTTTCATTTCAGCTCTCTGTCCCCCCGCCTGCCG TCCTTGTCTTTCATTTCAGCTATCTGTCCCCCCGCCTGCCG < 41bp 0.530430147089224 0.862167725812528 0.25287533 0.46803883 prediction 0.663475157446608 Functional Gain - TMEM95 ENSG00000182896 CDS Human protein_coding chr17:7259349 chr17:7259350 nonsynonymous SNV 0.784 3 22 hPsi_associated_SNPs_26446 0 0 0 0 2 unknown 0.438715335167746 0.438615841072686 0 0 hPsi_site_20170 iPseU_CNN:0;iRNA_PseU:0 20171 chr16 67286472 67286472 1 + C A LGG 67286471 + 67286451 67286491 41 ACCTGTCTCGGAAAGTAACATCTCTGGTCCCTGAGAGCTGC ACCTGTCTCGGAAAGTAACATATCTGGTCCCTGAGAGCTGC < 41bp 0.479374614417311 0.831737321933303 0.3301462 0.41222507 prediction 0.663474643866607 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67286471 chr16:67286472 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_26447 0 0 1 0 0 Cytosol 0.438724486244033 0.438684678206737 0 0 hPsi_site_20171 iPseU_CNN:0;iRNA_PseU:0 20172 chr15 66624260 66624260 1 + G A rs115616821 66624259 + 66624239 66624279 41 TACTGAGCTCTTCCAGTGCATGTACTTCAAAGACAAAGACC TACTGAGCTCTTCCAGTGCATATACTTCAAAGACAAAGACC < 41bp 0.413372166768394 0.831735228562145 0.27023277 0.33871254 prediction 0.66347045712429 Functional Gain - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66624259 chr15:66624260 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_26448 0 0 0 0 2 chromatin 0.438718722204639 0.438722141774773 0 0 hPsi_site_20172 iPseU_CNN:0;iRNA_PseU:0 20173 chr17 7127040 7127040 1 + C A COAD 7127039 + 7127019 7127059 41 AGAGGCCGCCATCAGCAAAATCTTTGGCTCGGTGAGGTCCC AGAGGCCGCCATCAGCAAAATATTTGGCTCGGTGAGGTCCC < 41bp 0.537565028536957 0.86929349446225 0.39027113 0.63949823 prediction 0.663456931850585 Functional Gain - ACADVL ENSG00000072778 CDS Human protein_coding chr17:7127039 chr17:7127040 synonymous SNV . 0 22 hPsi_associated_SNPs_26449 0 0 1 0 2 Endoplasmic reticulum 0.438718521012267 0.438718592618299 0.27899646 0 hPsi_site_20173 iPseU_CNN:0.27899646;iRNA_PseU:0 20174 chr1 16375058 16375058 1 + C A UCEC 16375057 + 16375037 16375077 41 GGCAGTGGGCGTGGCCACAGTCTTTGCAGCTCCCTTCAGCG GGCAGTGGGCGTGGCCACAGTATTTGCAGCTCCCTTCAGCG < 41bp 0.461856381818055 0.831727715505277 0.3223766 0.49840918 prediction 0.663455431010554 Functional Gain - CLCNKB ENSG00000184908 CDS Human protein_coding chr1:16375057 chr1:16375058 synonymous SNV . 0 22 hPsi_associated_SNPs_26450 0 0 0 0 2 exosome 0.437808045319443 0.438935334649841 0 0 hPsi_site_20174 iPseU_CNN:0;iRNA_PseU:0 20175 chr4 119461435 119461435 1 + C A LUAD 119461434 + 119461414 119461454 41 AGATTCCTCCATTAGTTCATTCCAAAACACCAGAAGGAAAC AGATTCCTCCATTAGTTCATTACAAAACACCAGAAGGAAAC < 41bp 0.505974756795631 0.837700927319708 0.3156298 0.4903799 prediction 0.663452341048155 Functional Gain - CEP170P1 ENSG00000154608 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:119461434 chr4:119461435 . . 0 22 hPsi_associated_SNPs_26451 0 0 0 0 1 unknown 0.438718582212819 0.438718569910814 0 0 hPsi_site_20175 iPseU_CNN:0;iRNA_PseU:0 20176 chrX 106890907 106890907 1 + C A UCEC 106890906 + 106890886 106890926 41 TCTTCTCCGGTCCTGCTATTTCTCGCATCAACAACGCATGC TCTTCTCCGGTCCTGCTATTTATCGCATCAACAACGCATGC < 41bp 0.462889468704512 0.831720517714735 0.23364633 0.35421133 prediction 0.66344103542947 Functional Gain - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106890906 chrX:106890907 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26452 0 0 1 0 2 Ribosome 0.438706428734967 0.438632159183305 0 0 hPsi_site_20176 iPseU_CNN:0;iRNA_PseU:0 20177 chr21 35757834 35757834 1 + G A LUSC 35757833 + 35757813 35757853 41 CAGCAAAAACATTAATTCTCTGCCTGACATTTGCTGGGGTG CAGCAAAAACATTAATTCTCTACCTGACATTTGCTGGGGTG < 41bp 0.436752272223524 0.831716580540899 0.26453084 0.518918 prediction 0.663433161081797 Functional Gain - SMIM11A;SMIM11B ENSG00000205670 CDS Human protein_coding chr21:35757833 chr21:35757834 nonsynonymous SNV 0.984 3 22 hPsi_associated_SNPs_26453 0 0 1 0 1 unknown 0.438728140119815 0.438725203801152 0.037836 0 hPsi_site_20177 iPseU_CNN:0.037836;iRNA_PseU:0 20178 chr19 11019856 11019856 1 + G A KIRP 11019855 + 11019835 11019875 41 CACCTACCAGCGCGCCATCCTGCAAAACCACACCGACTTCA CACCTACCAGCGCGCCATCCTACAAAACCACACCGACTTCA < 41bp 0.420348072996383 0.831711407303295 0.19700262 0.49745125 prediction 0.66342281460659 Functional Gain - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11019855 chr19:11019856 synonymous SNV . 0 22 hPsi_associated_SNPs_26454 0 0 1 0 2 Ribosome 0.438718592986351 0.438718592994974 0 0 hPsi_site_20178 iPseU_CNN:0;iRNA_PseU:0 20179 chr1 248308731 248308731 1 + G A ESCA 248308730 + 248308710 248308750 41 TGGCAGCAAGTCCATTTCTATGGCTGGTTGTGCCACACAAA TGGCAGCAAGTCCATTTCTATAGCTGGTTGTGCCACACAAA < 41bp 0.543839257413933 0.875549379893445 0.1791111 0.35568106 prediction 0.663420244959024 Functional Gain - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248308730 chr1:248308731 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26455 0 0 0 0 0 unknown 0.438731541063904 0.438709356831202 0 0 hPsi_site_20179 iPseU_CNN:0;iRNA_PseU:0 20180 chr9 116053188 116053188 1 + G A STAD 116053187 + 116053167 116053207 41 CCAATCCACAGCTATCACATTGCAACCGGCAGTGGTGACAA CCAATCCACAGCTATCACATTACAACCGGCAGTGGTGACAA < 41bp 0.424560648142271 0.831709977310392 0.28755134 0.40902093 prediction 0.663419954620785 Functional Gain - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116053187 chr9:116053188 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_26456 0 0 1 0 1 Ribosome 0.438657973216151 0.438700794386797 0 0 hPsi_site_20180 iPseU_CNN:0;iRNA_PseU:0 20181 chr7 143141121 143141121 1 + C A READ 143141120 + 143141100 143141140 41 ACGGAGCTACTGTGAGAAATTCTATCTCTTCCCTCTAAAAA ACGGAGCTACTGTGAGAAATTATATCTCTTCCCTCTAAAAA < 41bp 0.501837785469305 0.833543259185156 0.24348193 0.37769377 prediction 0.663410947431702 Functional Gain - TAS2R60 ENSG00000185899 CDS Human protein_coding chr7:143141120 chr7:143141121 nonsynonymous SNV 0.543 0 22 hPsi_associated_SNPs_26457 0 0 0 0 0 exosome 0.4387050131282 0.438718584386389 0 0 hPsi_site_20181 iPseU_CNN:0;iRNA_PseU:0 20182 chr17 18292359 18292359 1 + G A rs532648577 18292358 + 18292338 18292378 41 CCAGACCTCATGCCACCTGCTGTAGCCACTGGGCTCAGCCC CCAGACCTCATGCCACCTGCTATAGCCACTGGGCTCAGCCC < 41bp 0.47274243571705 0.831704906367964 0.33400518 0.42817336 prediction 0.663409812735928 Functional Gain - EVPLL ENSG00000267441 ncRNA_exonic Human processed_pseudogene chr17:18292358 chr17:18292359 . . 0 22 hPsi_associated_SNPs_26458 0 0 0 1 0 exosome 0.438715217077302 0.438722356044675 0 0 hPsi_site_20182 iPseU_CNN:0;iRNA_PseU:0 20183 chr3 93803192 93803192 1 + C A UCEC 93803191 + 93803171 93803211 41 CTCCTAAATGCTGCTTCTCTTCTCCCAGTGTTGGCTCTGGA CTCCTAAATGCTGCTTCTCTTATCCCAGTGTTGGCTCTGGA < 41bp 0.475757409990771 0.83170199928392 0.30728582 0.45645502 prediction 0.663403998567839 Functional Gain - NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93803191 chr3:93803192 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_26459 0 0 1 0 0 chromatin 0.438726109535477 0.438866543768422 0 0 hPsi_site_20183 iPseU_CNN:0;iRNA_PseU:0 20184 chr19 15905007 15905007 1 + G A SKCM 15905006 + 15904986 15905026 41 TGCTCATCATGGCCACTGTCTGGAGCGAGCGCAGCCTCCAC TGCTCATCATGGCCACTGTCTAGAGCGAGCGCAGCCTCCAC < 41bp 0.449741592080869 0.831698226029184 0.22737002 0.6516825 prediction 0.663396452058368 Functional Gain - OR10H5 ENSG00000172519 CDS Human protein_coding chr19:15905006 chr19:15905007 stopgain 0.030 0 22 hPsi_associated_SNPs_26460 0 0 0 0 0 unknown 0.43872114231041 0.438718386547092 0.303365 0 hPsi_site_20184 iPseU_CNN:0.303365;iRNA_PseU:0 20185 chr13 44454158 44454158 1 + G A rs76474346 44454157 + 44454137 44454177 41 GGACCGAATCGCCTCTGGTGTGCGTTGTCCGACAGGAAGTC GGACCGAATCGCCTCTGGTGTACGTTGTCCGACAGGAAGTC < 41bp 0.435725278574348 0.831695334261452 0.4300145 0.78385603 prediction 0.663390668522903 Functional Gain - LACC1 ENSG00000179630 UTR5 Human protein_coding chr13:44454157 chr13:44454158 . . 0 22 hPsi_associated_SNPs_26461 0 0 0 0 1 exosome 0.438714688927313 0.438703886794759 0.56771206 0 hPsi_site_20185 iPseU_CNN:0.56771206;iRNA_PseU:0 20186 chr17 7290716 7290716 1 + C A UCEC 7290715 + 7290695 7290735 41 AGAGACAGAAAGAAGGCAAATCTTTGGGATGCGCCCCCAGC AGAGACAGAAAGAAGGCAAATATTTGGGATGCGCCCCCAGC < 41bp 0.471285004718202 0.831694048752368 0.6574759 0.69451714 prediction 0.663388097504736 Functional Gain - TNK1 ENSG00000174292 CDS Human protein_coding chr17:7290715 chr17:7290716 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_26462 0 0 0 1 2 nucleus 0.438718592995088 0.438718592987207 0.07408248 0 hPsi_site_20186 iPseU_CNN:0.07408248;iRNA_PseU:0 20187 chr12 57963081 57963081 1 + C A UCEC 57963080 + 57963060 57963100 41 GACAGCAAAATGACAAGGATTCTCCAGGACTCTCTCGGGGG GACAGCAAAATGACAAGGATTATCCAGGACTCTCTCGGGGG < 41bp 0.534719404111362 0.86641135986974 0.34796315 0.48190594 prediction 0.663383911516756 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57963080 chr12:57963081 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_26463 0 0 0 0 1 Cytosol 0.438718013985936 0.438718592994974 0 0 hPsi_site_20187 iPseU_CNN:0;iRNA_PseU:0 Multiple sclerosis 20188 chr7 2752299 2752299 1 + G A SKCM 2752298 + 2752278 2752318 41 AGTGGCAGAGGAGGACCTGGTGCAGGTGGACAGAGCCGTGG AGTGGCAGAGGAGGACCTGGTACAGGTGGACAGAGCCGTGG < 41bp 0.569618835802826 0.901309069585522 0.4032776 0.8500985 prediction 0.663380467565392 Functional Gain - AMZ1 ENSG00000174945 CDS Human protein_coding chr7:2752298 chr7:2752299 synonymous SNV . 0 22 hPsi_associated_SNPs_26464 0 0 0 0 0 nucleus 0.438718113158355 0.4387182033741 0.700197 0 hPsi_site_20188 iPseU_CNN:0.700197;iRNA_PseU:0 20189 chr10 133946999 133946999 1 + G A ESCA 133946998 + 133946978 133947018 41 GAACTTCCTCATGCAGCTGGTGCAGGAGACGCTTCAGACCA GAACTTCCTCATGCAGCTGGTACAGGAGACGCTTCAGACCA < 41bp 0.416153032578933 0.83168632986119 0.3519557 0.9077064 prediction 0.66337265972238 Functional Gain - JAKMIP3 ENSG00000188385 CDS Human protein_coding chr10:133946998 chr10:133946999 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26465 0 0 0 0 1 Cytosol 0.438741747342727 0.43874544162379 0.8154128 0 hPsi_site_20189 iPseU_CNN:0.8154128;iRNA_PseU:0 20190 chrX 50653811 50653811 1 + C A UCEC 50653810 + 50653790 50653830 41 CTCCTCAGTATTCTTAGAATTCTTTTTCTTTGTGAACTCGT CTCCTCAGTATTCTTAGAATTATTTTTCTTTGTGAACTCGT < 41bp 0.502297779966944 0.833980984168591 0.36952692 0.3844527 prediction 0.663366408403295 Functional Gain - BMP15 ENSG00000130385 CDS Human protein_coding chrX:50653810 chrX:50653811 nonsynonymous SNV 0.178 2 22 hPsi_associated_SNPs_26466 0 0 0 0 0 exosome 0.438718627613317 0.43871863781092 0 0 hPsi_site_20190 iPseU_CNN:0;iRNA_PseU:0 20191 chr1 43784936 43784936 1 + G A LGG 43784935 + 43784915 43784955 41 AGGGACCTGGCTGCCCGGAATGTGCTGGTCGGAGAGAACCT AGGGACCTGGCTGCCCGGAATATGCTGGTCGGAGAGAACCT < 41bp 0.435960066156068 0.831680269026781 0.47193855 0.6310253 prediction 0.663360538053562 Functional Gain - TIE1 ENSG00000066056 CDS Human protein_coding chr1:43784935 chr1:43784936 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_26467 0 0 0 0 2 Cytosol 0.438712189131126 0.438718570039819 0.2620506 0 hPsi_site_20191 iPseU_CNN:0.2620506;iRNA_PseU:0 20192 chr4 47538806 47538806 1 + C A UCEC 47538805 + 47538785 47538825 41 TCTACAATGAAAAAATGGATTCTATTGTTCAGTGCCGAGCC TCTACAATGAAAAAATGGATTATATTGTTCAGTGCCGAGCC < 41bp 0.517309382436786 0.848981416163725 0.3356443 0.32186735 prediction 0.663344067453877 Functional Gain - ATP10D ENSG00000145246 CDS Human protein_coding chr4:47538805 chr4:47538806 nonsynonymous SNV 0.652 2 22 hPsi_associated_SNPs_26468 0 0 0 0 1 exosome 0.438721577743147 0.438738315091948 0 0 hPsi_site_20192 iPseU_CNN:0;iRNA_PseU:0 20193 chr3 196613137 196613137 1 + C A COAD 196613136 + 196613116 196613156 41 CCTGGGACCAGTCATCCTGTTCTTCTCCTAAGTGGGAGTGT CCTGGGACCAGTCATCCTGTTATTCTCCTAAGTGGGAGTGT < 41bp 0.477739459243535 0.831666737500824 0.2725262 0.5006129 prediction 0.663333475001649 Functional Gain - SENP5 ENSG00000119231 CDS Human protein_coding chr3:196613136 chr3:196613137 nonsynonymous SNV 0.954 1 22 hPsi_associated_SNPs_26469 0 0 1 0 0 Cytosol 0.438958342171662 0.445218316068306 0.00122580000000005 0 hPsi_site_20193 iPseU_CNN:0.00122580000000005;iRNA_PseU:0 20194 chr19 11728335 11728335 1 + G A LIHC 11728334 + 11728314 11728354 41 TGGACCTTATAAATGTAAGGTGTGTGGGAAAGCCTTTGATT TGGACCTTATAAATGTAAGGTATGTGGGAAAGCCTTTGATT < 41bp 0.445227353280644 0.831658919509578 0.22647992 0.476525 prediction 0.663317839019155 Functional Gain - ZNF627 ENSG00000198551 CDS Human protein_coding chr19:11728334 chr19:11728335 synonymous SNV . 0 22 hPsi_associated_SNPs_26470 0 0 0 0 0 Cytosol 0.438568018670794 0.438709514557538 0 0 hPsi_site_20194 iPseU_CNN:0;iRNA_PseU:0 20195 chr14 52471088 52471088 1 + C A UCEC 52471087 + 52471067 52471107 41 TCTCATAAAACAGATGCAGTTCTTAATGAAGCTGCTCAAAT TCTCATAAAACAGATGCAGTTATTAATGAAGCTGCTCAAAT < 41bp 0.505719102197296 0.837377159809078 0.24156958 0.46196204 prediction 0.663316115223564 Functional Gain - C14orf166 ENSG00000087302 CDS Human protein_coding chr14:52471087 chr14:52471088 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26471 0 0 1 0 1 Ribosome 0.438967397757907 0.43672152349934 0 0 hPsi_site_20195 iPseU_CNN:0;iRNA_PseU:0 20196 chr4 71346657 71346657 1 + C A UCEC 71346656 + 71346636 71346676 41 ATTAGAAAGTCCTATAAATGTCTGCACAAACGCTGTAGGCC ATTAGAAAGTCCTATAAATGTATGCACAAACGCTGTAGGCC < 41bp 0.485648972364275 0.831656563135817 0.2643655 0.3347362 prediction 0.663313126271634 Functional Gain - MUC7 ENSG00000171195 CDS Human protein_coding chr4:71346656 chr4:71346657 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26472 0 0 0 0 0 unknown 0.438770135067246 0.438776182400551 0 0 hPsi_site_20196 iPseU_CNN:0;iRNA_PseU:0 20197 chr14 21549814 21549814 1 + G A rs61741563 21549813 + 21549793 21549833 41 GCGGGCCCTGGCCCTGGACCTGGGCAGCCCAGCAGCCCTGC GCGGGCCCTGGCCCTGGACCTAGGCAGCCCAGCAGCCCTGC < 41bp 0.426609014568556 0.831645416134621 0.16561908 0.21940613 prediction 0.663290832269243 Functional Gain - ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21549813 chr14:21549814 synonymous SNV . 0 22 hPsi_associated_SNPs_26473 0 0 1 0 0 Cytosol 0.438718597295106 0.438718559273126 0 0 hPsi_site_20197 iPseU_CNN:0;iRNA_PseU:0 20198 chr19 54967962 54967962 1 + G A CESC 54967961 + 54967941 54967981 41 GCGCCTCGAGCCCCTGGTGCTGCAGATGAGCAGCCTGGAGA GCGCCTCGAGCCCCTGGTGCTACAGATGAGCAGCCTGGAGA < 41bp 0.414112999996251 0.831643537105302 0.26250148 0.42703435 prediction 0.663287074210604 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967961 chr19:54967962 synonymous SNV . 0 22 hPsi_associated_SNPs_26474 0 0 1 0 0 chromatin 0.438756273622433 0.439155800638763 0 0 hPsi_site_20198 iPseU_CNN:0;iRNA_PseU:0 20199 chr22 37326823 37326823 1 + C A LUAD 37326822 + 37326802 37326842 41 GACCCACGGCCAATACATCGTCTCTGTTCAGCCAAGGAGGG GACCCACGGCCAATACATCGTATCTGTTCAGCCAAGGAGGG < 41bp 0.453612974191263 0.831637275445633 0.27331614 0.4603022 prediction 0.663274550891266 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37326822 chr22:37326823 synonymous SNV . 0 22 hPsi_associated_SNPs_26475 0 0 0 0 1 Endoplasmic reticulum 0.438717666220835 0.438718714630678 0 0 hPsi_site_20199 iPseU_CNN:0;iRNA_PseU:0 20200 chr10 115668208 115668208 1 + G A OV 115668207 + 115668187 115668227 41 AGACAGCAGTGCTTGTATGATGAAGGCAATTTTGTTCAGTC AGACAGCAGTGCTTGTATGATAAAGGCAATTTTGTTCAGTC < 41bp 0.455231223543744 0.831637237666462 0.19531316 0.24903595 prediction 0.663274475332924 Functional Gain - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115668207 chr10:115668208 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_26476 0 0 1 1 0 Nucleus 0.438407992934229 0.438637132785094 0 0 hPsi_site_20200 iPseU_CNN:0;iRNA_PseU:0 20201 chr5 180420116 180420116 1 + C A BRCA 180420115 + 180420095 180420135 41 TGTATGGGTGCTGGTTCAGTTCCCAGATTTACGATGAGGAG TGTATGGGTGCTGGTTCAGTTACCAGATTTACGATGAGGAG < 41bp 0.52815967128197 0.859793546974168 0.24492365 0.67517537 prediction 0.663267751384394 Functional Gain - BTNL3 ENSG00000168903 CDS Human protein_coding chr5:180420115 chr5:180420116 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_26477 0 0 0 0 1 nucleus 0.438718591794922 0.438724066766725 0.35035074 0 hPsi_site_20201 iPseU_CNN:0.35035074;iRNA_PseU:0 20202 chr9 5757341 5757341 1 + C A UCS 5757340 + 5757320 5757360 41 ACTACTGCTGGTATTCAAGTTCTTCAGGAGGTTTCCATGTC ACTACTGCTGGTATTCAAGTTATTCAGGAGGTTTCCATGTC < 41bp 0.525516270017301 0.857146970039908 0.33256724 0.33209163 prediction 0.663261400045214 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5757340 chr9:5757341 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_26478 0 0 0 0 1 Nucleus 0.438725059193115 0.438594404873203 0 0 hPsi_site_20202 iPseU_CNN:0;iRNA_PseU:0 20203 chr12 2929959 2929959 1 + G T SARC 2929958 + 2929938 2929978 41 ATGGTGTCTCAGCCAGGTTGTGCGTATGCAATTCTACTGTG ATGGTGTCTCAGCCAGGTTGTTCGTATGCAATTCTACTGTG < 41bp 0.51107681035182 0.842703215840364 0.25319156 0.3109485 prediction 0.663252810977089 Functional Gain - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2929958 chr12:2929959 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_26479 0 0 0 0 2 nucleoplasm 0.438876286226724 0.438599209107772 0 0 hPsi_site_20203 iPseU_CNN:0;iRNA_PseU:0 20204 chr14 60977969 60977969 1 + G A SKCM 60977968 + 60977948 60977988 41 GCGACAGCGAGTGCGACATCTGAGTTGCCCATCCAGGATGC GCGACAGCGAGTGCGACATCTAAGTTGCCCATCCAGGATGC < 41bp 0.444156885863824 0.831626384596204 0.27972174 0.50267625 prediction 0.663252769192408 Functional Gain - SIX6 ENSG00000184302 CDS Human protein_coding chr14:60977968 chr14:60977969 synonymous SNV . 0 22 hPsi_associated_SNPs_26480 0 0 0 0 0 unknown 0.432608687479745 0.438942061460187 0.00535250000000009 0 hPsi_site_20204 iPseU_CNN:0.00535250000000009;iRNA_PseU:0 20205 chr15 90274714 90274714 1 + C A UCEC 90274713 + 90274693 90274733 41 CTGTGCTGCGCCCATTGCAGTCTCTCAGCTCAGCTGCTCCT CTGTGCTGCGCCCATTGCAGTATCTCAGCTCAGCTGCTCCT < 41bp 0.450413216487293 0.831619376714559 0.43270403 0.7650886 prediction 0.663238753429119 Functional Gain - WDR93 ENSG00000140527 CDS Human protein_coding chr15:90274713 chr15:90274714 synonymous SNV . 0 22 hPsi_associated_SNPs_26481 0 0 0 0 2 exosome 0.43871860467747 0.438728879219782 0.5301772 0 hPsi_site_20205 iPseU_CNN:0.5301772;iRNA_PseU:0 20206 chr1 79002235 79002235 1 + C A UCEC 79002234 + 79002214 79002254 41 CGAAAGGCTGTCCTTAAGAATCTCTATAAGCTTGCCAGTCA CGAAAGGCTGTCCTTAAGAATATCTATAAGCTTGCCAGTCA < 41bp 0.509632453712541 0.841247884938773 0.33293438 0.7183768 prediction 0.663230862452463 Functional Gain - PTGFR ENSG00000122420 CDS Human protein_coding chr1:79002234 chr1:79002235 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_26482 0 0 0 2 0 exosome 0.438708643884696 0.438717128634106 0.4367536 0 hPsi_site_20206 iPseU_CNN:0.4367536;iRNA_PseU:0 20207 chr5 140188563 140188563 1 + G A HNSC 140188562 + 140188542 140188582 41 GGTGGCAAAGGTGCGCGCGGTGGATGCTGACTCGGGCTACA GGTGGCAAAGGTGCGCGCGGTAGATGCTGACTCGGGCTACA < 41bp 0.43390496408315 0.831610593926711 0.7405683 0.9360773 prediction 0.663221187853422 Functional Gain - PCDHA4 ENSG00000204967 CDS Human protein_coding chr5:140188562 chr5:140188563 synonymous SNV . 0 22 hPsi_associated_SNPs_26483 0 0 0 0 0 insoluble cytoplasm 0.43871958477391 0.438686208539077 0.391018 0 hPsi_site_20207 iPseU_CNN:0.391018;iRNA_PseU:0 20208 chr20 58562618 58562618 1 + G A PRAD 58562617 + 58562597 58562637 41 GAGAGCAAAATTCAACATATTGCATGGCAATGAAGAGGGGC GAGAGCAAAATTCAACATATTACATGGCAATGAAGAGGGGC < 41bp 0.563599183254722 0.895193669080038 0.20980641 0.65305555 prediction 0.663188971650631 Functional Gain - CDH26 ENSG00000124215 CDS Human protein_coding chr20:58562617 chr20:58562618 synonymous SNV . 0 22 hPsi_associated_SNPs_26484 0 0 0 1 1 nucleoplasm 0.438720849392783 0.438721428716506 0.3061111 0 hPsi_site_20208 iPseU_CNN:0.3061111;iRNA_PseU:0 20209 chr12 94694801 94694801 1 + G A LAML 94694800 + 94694780 94694820 41 ATTGCCCAGGCATTCATGGATGCATTTTCTCTCACAGAGCA ATTGCCCAGGCATTCATGGATACATTTTCTCTCACAGAGCA < 41bp 0.55711326545571 0.888693138378845 0.34223193 0.39371067 prediction 0.663159745846269 Functional Gain - PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94694800 chr12:94694801 nonsynonymous SNV 0.972 2 22 hPsi_associated_SNPs_26485 0 0 0 0 1 chromatin 0.438717219871353 0.438726887375265 0 0 hPsi_site_20209 iPseU_CNN:0;iRNA_PseU:0 20210 chr1 32636421 32636421 1 + C A UCEC 32636420 + 32636400 32636440 41 GACGATGATAGCAGCCTGGCTCCCCAAGTCGATGAAACGCA GACGATGATAGCAGCCTGGCTACCCAAGTCGATGAAACGCA < 41bp 0.503573126911597 0.835150485097997 0.21628538 0.5799225 prediction 0.6631547163728 Functional Gain - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32636420 chr1:32636421 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26486 0 0 1 0 0 Cytosol 0.438659228061941 0.438720462849518 0.159845 0 hPsi_site_20210 iPseU_CNN:0.159845;iRNA_PseU:0 20211 chr1 158151448 158151448 1 + C A COAD 158151447 + 158151427 158151467 41 GAGACGCTGCAGCATATATTTCGGGTTTATCGAAGCAGCTT GAGACGCTGCAGCATATATTTAGGGTTTATCGAAGCAGCTT < 41bp 0.530622625119927 0.862195200537717 0.2878292 0.4967964 prediction 0.663145150835578 Functional Gain - CD1D ENSG00000158473 CDS Human protein_coding chr1:158151447 chr1:158151448 synonymous SNV . 0 22 hPsi_associated_SNPs_26487 0 0 0 0 1 Endoplasmic reticulum 0.438718592777028 0.438718100382362 0 0 hPsi_site_20211 iPseU_CNN:0;iRNA_PseU:0 20212 chr19 54946748 54946748 1 + G A rs149942161 54946747 + 54946727 54946767 41 TGGTGCAGCCCTGCGGGGCCTGTGCGAAGACGCCCTGGAAG TGGTGCAGCCCTGCGGGGCCTATGCGAAGACGCCCTGGAAG < 41bp 0.437745992800656 0.831570680081342 0.31136146 0.6867314 prediction 0.663141360162683 Functional Gain - TTYH1 ENSG00000167614 CDS Human protein_coding chr19:54946747 chr19:54946748 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_26488 0 0 1 0 1 cytosol 0.438871291056226 0.43875538660609 0.3734628 0 hPsi_site_20212 iPseU_CNN:0.3734628;iRNA_PseU:0 20213 chr11 10327535 10327535 1 + G T LUAD 10327534 + 10327514 10327554 41 GAGTCGTGGGAAGAGGGAACTGCGGATGTCCAGCAGCTACC GAGTCGTGGGAAGAGGGAACTTCGGATGTCCAGCAGCTACC < 41bp 0.503564046929133 0.835123625583164 0.27986157 0.318434 prediction 0.663119157308062 Functional Gain - ADM ENSG00000148926 CDS Human protein_coding chr11:10327534 chr11:10327535 synonymous SNV . 0 22 hPsi_associated_SNPs_26489 0 0 1 0 1 Ribosome 0.438694075209674 0.439528922697102 0 0 hPsi_site_20213 iPseU_CNN:0;iRNA_PseU:0 20214 chr2 232577855 232577855 1 + G A rs537760044 232577854 + 232577834 232577874 41 TTATTTACATTTTATATTTTTGTACATATTGTTAGGGTCAG TTATTTACATTTTATATTTTTATACATATTGTTAGGGTCAG < 41bp 0.503849910879021 0.8354041056273 0.15866315 0.16860682 prediction 0.663108389496559 Functional Gain - PTMA ENSG00000187514 UTR3 Human protein_coding chr2:232577854 chr2:232577855 . . 0 22 hPsi_associated_SNPs_26490 0 0 1 8 0 Ribosome 0.438073722090131 0.438642734713597 0 0 hPsi_site_20214 iPseU_CNN:0;iRNA_PseU:0 20215 chr5 40945412 40945412 1 + C A CESC 40945411 + 40945391 40945431 41 GGAAGCGCTCCTTTTTTAGATCTTCATCATCTTCTTCACGC GGAAGCGCTCCTTTTTTAGATATTCATCATCTTCTTCACGC < 41bp 0.486923016294122 0.831547676122666 0.25929922 0.56734216 prediction 0.663095352245333 Functional Gain - C7 ENSG00000112936 CDS Human protein_coding chr5:40945411 chr5:40945412 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_26491 0 0 0 0 1 Endoplasmic reticulum 0.438589901277648 0.437722293070664 0.13468432 0 hPsi_site_20215 iPseU_CNN:0.13468432;iRNA_PseU:0 20216 chr1 146650718 146650718 1 + C A COAD 146650717 + 146650697 146650737 41 GTTTGTCATGCAGGAGGATTTCTCGCGTGATGGGAATGCTC GTTTGTCATGCAGGAGGATTTATCGCGTGATGGGAATGCTC < 41bp 0.491505498372901 0.831545148050504 0.47175673 0.7370734 prediction 0.663090296101007 Functional Gain - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650717 chr1:146650718 . . 0 22 hPsi_associated_SNPs_26492 0 0 1 0 0 unknown 0.438709249695111 0.438869364309432 0.4741468 0 hPsi_site_20216 iPseU_CNN:0.4741468;iRNA_PseU:0 20217 chrX 49021112 49021112 1 + G A LUSC 49021111 + 49021091 49021131 41 CCTGCCTCATGCCACTATTGTGGATCACCGGCCCCAGGTAC CCTGCCTCATGCCACTATTGTAGATCACCGGCCCCAGGTAC < 41bp 0.432741105273197 0.831544723198617 0.3842267 0.6327474 prediction 0.663089446397235 Functional Gain - MAGIX ENSG00000017621 CDS Human other chrX:49021111 chrX:49021112 stopgain 0.090 0 22 hPsi_associated_SNPs_26493 0 0 0 0 2 nucleus 0.438718587177545 0.438718497870723 0.2654948 0 hPsi_site_20217 iPseU_CNN:0.2654948;iRNA_PseU:0 20218 chr12 58166622 58166622 1 + G A UCEC 58166621 + 58166601 58166641 41 CAGTTCTGTTTCTGTGGGCATGTGCTGACCATCACGCAGAA CAGTTCTGTTTCTGTGGGCATATGCTGACCATCACGCAGAA < 41bp 0.562565016572983 0.894093917306301 0.26546103 0.30869967 prediction 0.663057801466635 Functional Gain - EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58166621 chr12:58166622 nonsynonymous SNV 0.965 0 22 hPsi_associated_SNPs_26494 0 0 0 0 1 unknown 0.437848605332304 0.437305754064742 0 0 hPsi_site_20218 iPseU_CNN:0;iRNA_PseU:0 20219 chr8 105367287 105367287 1 + G A SARC 105367286 + 105367266 105367306 41 TATGCAACTTAAAATCCTGGTGTCAGCATCTTTCTACCCCA TATGCAACTTAAAATCCTGGTATCAGCATCTTTCTACCCCA < 41bp 0.559852903667059 0.891375918732251 0.25465047 0.52271783 prediction 0.663046030130385 Functional Gain - DCSTAMP ENSG00000164935 CDS Human protein_coding chr8:105367286 chr8:105367287 synonymous SNV . 0 22 hPsi_associated_SNPs_26495 0 0 0 0 0 exosome 0.438958397387845 0.438731684244319 0.0454356600000001 0 hPsi_site_20219 iPseU_CNN:0.0454356600000001;iRNA_PseU:0 20220 chr14 20528483 20528483 1 + G A UCEC 20528482 + 20528462 20528502 41 ACTGACCACAAGACCATCTCTGTGTGGGGCTGCGTGACCCA ACTGACCACAAGACCATCTCTATGTGGGGCTGCGTGACCCA < 41bp 0.548451359730687 0.879967511086788 0.41260743 0.7442384 prediction 0.663032302712202 Functional Gain - OR4L1 ENSG00000176246 CDS Human protein_coding chr14:20528482 chr14:20528483 nonsynonymous SNV 0.846 1 22 hPsi_associated_SNPs_26496 0 0 0 0 0 unknown 0.438724773236223 0.438182340138401 0.4884768 0 hPsi_site_20220 iPseU_CNN:0.4884768;iRNA_PseU:0 20221 chr1 160097452 160097452 1 + G A LUAD 160097451 + 160097431 160097471 41 ACACCCATAGCAATGGAGATTGAACACTTCATCCAGCTGAT ACACCCATAGCAATGGAGATTAAACACTTCATCCAGCTGAT < 41bp 0.571233616785362 0.902749330086057 0.33151716 0.3920371 prediction 0.663031426601391 Functional Gain - ATP1A2 ENSG00000018625 CDS Human protein_coding chr1:160097451 chr1:160097452 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_26497 0 0 0 0 0 exosome 0.439774753593468 0.438885485160643 0 0 hPsi_site_20221 iPseU_CNN:0;iRNA_PseU:0 20222 chr1 153657501 153657501 1 + G A LUAD 153657500 + 153657480 153657520 41 CGGGTGCGCTGGGAGGACGTTGAGCCCAGTAGCCTTGAGAG CGGGTGCGCTGGGAGGACGTTAAGCCCAGTAGCCTTGAGAG < 41bp 0.570991939548861 0.902507156974638 0.49857315 0.8637656 prediction 0.663030434851553 Functional Gain - NPR1 ENSG00000169418 CDS Human protein_coding chr1:153657500 chr1:153657501 nonsynonymous SNV 0.353 1 22 hPsi_associated_SNPs_26498 0 0 0 0 1 Cytosol 0.438718572562382 0.438718617673704 0.7275312 0 hPsi_site_20222 iPseU_CNN:0.7275312;iRNA_PseU:0 20223 chr2 28635135 28635135 1 + G A LUAD 28635134 + 28635114 28635154 41 CCTGCACACCCCCATCGTGGTGACCTCCACACCTGCTGTCA CCTGCACACCCCCATCGTGGTAACCTCCACACCTGCTGTCA < 41bp 0.429571197538916 0.831514753748972 0.38294557 0.90073794 prediction 0.663029507497944 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28635134 chr2:28635135 synonymous SNV . 0 22 hPsi_associated_SNPs_26499 0 0 1 0 0 Cytosol 0.438724743668908 0.438718577042857 0.80147588 0 hPsi_site_20223 iPseU_CNN:0.80147588;iRNA_PseU:0 20224 chr11 71943737 71943737 1 + G T LIHC 71943736 + 71943716 71943756 41 GACCGGCAGCTCAATGCCTTTGACATCTCTCTGCGTTTCAC GACCGGCAGCTCAATGCCTTTTACATCTCTCTGCGTTTCAC < 41bp 0.500578796437089 0.83209072381432 0.37557566 0.6708783 prediction 0.663023854754462 Functional Gain - INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71943736 chr11:71943737 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26500 0 0 0 0 2 Cytosol 0.438718336840967 0.43881844733724 0.3417566 0 hPsi_site_20224 iPseU_CNN:0.3417566;iRNA_PseU:0 20225 chr16 88779732 88779732 1 + C A BLCA 88779731 + 88779711 88779751 41 GTGCTTTAGGACCCACCTGATCCTCCACATGGCCCGAGCCC GTGCTTTAGGACCCACCTGATACTCCACATGGCCCGAGCCC < 41bp 0.536672273634934 0.868174905358079 0.52838665 0.9831555 prediction 0.663005263446291 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779731 chr16:88779732 synonymous SNV . 0 22 hPsi_associated_SNPs_26501 0 0 0 0 1 Cytosol 0.438717067477411 0.438717944657381 0.9095377 0 hPsi_site_20225 iPseU_CNN:0.9095377;iRNA_PseU:0 20226 chr1 18808058 18808058 1 + G A LUSC 18808057 + 18808037 18808077 41 TGGCAGGACAGTAAACCCCGTGAGCATCCAGGACTGGGGCA TGGCAGGACAGTAAACCCCGTAAGCATCCAGGACTGGGGCA < 41bp 0.44548781822338 0.831499167071007 0.31867662 0.6103205 prediction 0.662998334142014 Functional Gain - KLHDC7A ENSG00000179023 CDS Human protein_coding chr1:18808057 chr1:18808058 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26502 0 0 0 0 0 Cytosol 0.43871851454698 0.438718593039365 0.220641 0 hPsi_site_20226 iPseU_CNN:0.220641;iRNA_PseU:0 20227 chr2 24245764 24245764 1 + G A LUSC 24245763 + 24245743 24245783 41 GGGAAGAAGACGTCAGCCTTTGGGATCTTTGTGAGTGAGGC GGGAAGAAGACGTCAGCCTTTAGGATCTTTGTGAGTGAGGC < 41bp 0.561915064272824 0.89341131825591 0.27997476 0.31453353 prediction 0.662992507966172 Functional Gain - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24245763 chr2:24245764 nonsynonymous SNV 0.961 5 22 hPsi_associated_SNPs_26503 0 0 0 0 2 Endoplasmic reticulum 0.438718626454917 0.438718594301779 0 0 hPsi_site_20227 iPseU_CNN:0;iRNA_PseU:0 20228 chr22 32000333 32000333 1 + G A COAD 32000332 + 32000312 32000352 41 AGCGGAGCGGCAGAAGCTGATGCGAGCAGACCTGCACCACC AGCGGAGCGGCAGAAGCTGATACGAGCAGACCTGCACCACC < 41bp 0.425384930646947 0.831493847184243 0.29287672 0.65493584 prediction 0.662987694368486 Functional Gain - SFI1 ENSG00000198089 CDS Human protein_coding chr22:32000332 chr22:32000333 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26504 0 0 1 0 2 chromatin 0.438719483368788 0.438717800813672 0.30987168 0 hPsi_site_20228 iPseU_CNN:0.30987168;iRNA_PseU:0 20229 chr8 94935050 94935050 1 + G A CHOL 94935049 + 94935029 94935069 41 TCCTTGGAGGCGCAAGTTGGTGATCCTAATTCTTTTCTCAA TCCTTGGAGGCGCAAGTTGGTAATCCTAATTCTTTTCTCAA < 41bp 0.424416680365392 0.831493356729918 0.32646036 0.81191194 prediction 0.662986713459836 Functional Gain - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935049 chr8:94935050 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26505 0 0 1 0 0 Ribosome 0.438718592701747 0.438718592978195 0.62382388 0 hPsi_site_20229 iPseU_CNN:0.62382388;iRNA_PseU:0 20230 chr20 62340319 62340319 1 + G A BLCA 62340318 + 62340298 62340338 41 GGGAGAGGACGAGGAAGAGCTGAGTGGGACAAAGGTGAGCG GGGAGAGGACGAGGAAGAGCTAAGTGGGACAAAGGTGAGCG < 41bp 0.552500775586319 0.883992124575527 0.2385118 0.41948283 prediction 0.662982697978416 Functional Gain - ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62340318 chr20:62340319 synonymous SNV . 0 22 hPsi_associated_SNPs_26506 0 0 1 0 0 chromatin 0.438722375907375 0.438688989300104 0 0 hPsi_site_20230 iPseU_CNN:0;iRNA_PseU:0 20231 chr3 10953801 10953801 1 + C A GBM 10953800 + 10953780 10953820 41 GGTAGATGCTGGAACGCAGATCTTTTTCTCCTATGCCATTT GGTAGATGCTGGAACGCAGATATTTTTCTCCTATGCCATTT < 41bp 0.509028529442104 0.840513050519672 0.30915868 0.35722312 prediction 0.662969042155137 Functional Gain - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10953800 chr3:10953801 synonymous SNV . 0 22 hPsi_associated_SNPs_26507 0 0 0 0 2 cytosol 0.438718592993089 0.438718592996761 0 0 hPsi_site_20231 iPseU_CNN:0;iRNA_PseU:0 20232 chrX 73289476 73289476 1 + G A rs73488787 73289475 + 73289455 73289495 41 GAAATTTCGGAGTGTGATGCTGGAAAGCCCCTCTGTGAATG GAAATTTCGGAGTGTGATGCTAGAAAGCCCCTCTGTGAATG < 41bp 0.443650998355691 0.831484027912931 0.14725742 0.25260022 prediction 0.662968055825863 Functional Gain - JPX ENSG00000225470;ENSG00000234969 ncRNA_exonic Human other chrX:73289475 chrX:73289476 . . 0 22 hPsi_associated_SNPs_26508 0 0 0 1 0 unknown 0.43871859299438 0.438718589383033 0 0 hPsi_site_20232 iPseU_CNN:0;iRNA_PseU:0 20233 chr19 1073206 1073206 1 + C A KICH 1073205 + 1073185 1073225 41 CCTGGGTGAGGCTCTGCGTGTCATGCATCAGATCATCTCCA CCTGGGTGAGGCTCTGCGTGTAATGCATCAGATCATCTCCA < 41bp 0.460026038459321 0.831478329917034 0.5864235 0.8983413 prediction 0.662956659834068 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1073205 chr19:1073206 stopgain . 0 22 hPsi_associated_SNPs_26509 0 0 0 0 2 chromatin 0.45483172990775 0.445392855946198 0.6238356 0 hPsi_site_20233 iPseU_CNN:0.6238356;iRNA_PseU:0 20234 chr12 119588876 119588876 1 + C A LIHC 119588875 + 119588855 119588895 41 AGTGAAGAAGTCCAGTTTGGTCCCATCCACAGCCCGGAGCT AGTGAAGAAGTCCAGTTTGGTACCATCCACAGCCCGGAGCT < 41bp 0.475484150237092 0.83147680605548 0.20352176 0.8139799 prediction 0.66295361211096 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119588875 chr12:119588876 synonymous SNV . 0 22 hPsi_associated_SNPs_26510 0 0 1 0 1 Endoplasmic reticulum 0.438718732082118 0.438711128298627 0.6279598 0 hPsi_site_20234 iPseU_CNN:0.6279598;iRNA_PseU:0 20235 chr1 161179298 161179298 1 + G A rs41428447 161179297 + 161179277 161179317 41 GTTTGGAGAAATCACACGTTTGTTGAACCACATCATGGCTG GTTTGGAGAAATCACACGTTTATTGAACCACATCATGGCTG < 41bp 0.570361763113713 0.901837753192772 0.4088844 0.6268007 prediction 0.662951980158117 Functional Gain - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179297 chr1:161179298 synonymous SNV . 0 22 hPsi_associated_SNPs_26511 1 0 1 0 2 Ribosome 0.438798752251142 0.438724877269971 0.2536014 0 hPsi_site_20235 iPseU_CNN:0.2536014;iRNA_PseU:0 20236 chr18 33257697 33257697 1 + C A UCEC 33257696 + 33257676 33257716 41 CACATGATAGAAGAAATTGTTCTAGTAGATGATGCCAGTGA CACATGATAGAAGAAATTGTTATAGTAGATGATGCCAGTGA < 41bp 0.511242299344346 0.842718134998889 0.4450892 0.6014486 prediction 0.662951671309087 Functional Gain - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33257696 chr18:33257697 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26512 0 0 1 0 1 Endoplasmic reticulum 0.452280428299515 0.440624892230884 0.2028972 0 hPsi_site_20236 iPseU_CNN:0.2028972;iRNA_PseU:0 20237 chrX 106171471 106171471 1 + G A SARC 106171470 + 106171450 106171490 41 AGGTCTGCCATGGCCTCTCTTGGCCTCCAACTTGTGGGCTA AGGTCTGCCATGGCCTCTCTTAGCCTCCAACTTGTGGGCTA < 41bp 0.567792889401513 0.899267971359972 0.25363833 0.43651286 prediction 0.662950163916918 Functional Gain - CLDN2 ENSG00000165376 CDS Human protein_coding chrX:106171470 chrX:106171471 nonsynonymous SNV 0.969 3 22 hPsi_associated_SNPs_26513 0 0 0 0 0 Ribosome 0.438719600699601 0.438624132354166 0 0 hPsi_site_20237 iPseU_CNN:0;iRNA_PseU:0 20238 chr4 88534114 88534114 1 + C A UCEC 88534113 + 88534093 88534133 41 ATGAGGATGAAGACGAGGGTTCTGGTGATGATGAAGATGAA ATGAGGATGAAGACGAGGGTTATGGTGATGATGAAGATGAA < 41bp 0.528638371468541 0.860111377359038 0.2605138 0.4963694 prediction 0.662946011780993 Functional Gain - DSPP ENSG00000152591 CDS Human protein_coding chr4:88534113 chr4:88534114 nonsynonymous SNV 0.962 3 22 hPsi_associated_SNPs_26514 0 0 0 0 0 exosome 0.442814924697752 0.438728871221308 0 0 hPsi_site_20238 iPseU_CNN:0;iRNA_PseU:0 20239 chr11 56113853 56113853 1 + C A LUAD 56113852 + 56113832 56113872 41 GCTAGCATTCTTTGAGATTTTCATCATCTCTGAGCTCTTTA GCTAGCATTCTTTGAGATTTTAATCATCTCTGAGCTCTTTA < 41bp 0.495056023679634 0.831469318509291 0.24184957 0.4550593 prediction 0.662938637018581 Functional Gain - OR8K1 ENSG00000150261 CDS Human protein_coding chr11:56113852 chr11:56113853 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26515 0 0 0 0 0 unknown 0.438713140864758 0.438712558781032 0 0 hPsi_site_20239 iPseU_CNN:0;iRNA_PseU:0 20240 chr14 59112079 59112079 1 + C A COAD 59112078 + 59112058 59112098 41 ACAATTTAATTCCCTTGATGTCATTGCAGATGTGAATCCCA ACAATTTAATTCCCTTGATGTAATTGCAGATGTGAATCCCA < 41bp 0.481461566816154 0.831462427724352 0.21679491 0.57570744 prediction 0.662924855448703 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112078 chr14:59112079 synonymous SNV . 0 22 hPsi_associated_SNPs_26516 0 0 0 0 0 exosome 0.438718592952863 0.43871851337593 0.15141488 0 hPsi_site_20240 iPseU_CNN:0.15141488;iRNA_PseU:0 20241 chr4 2943383 2943383 1 + G A SKCM 2943382 + 2943362 2943402 41 GGAGAGGCCCCATGATGGCGTGGAAGGATGGCAGGGACCCG GGAGAGGCCCCATGATGGCGTAGAAGGATGGCAGGGACCCG < 41bp 0.436916015697436 0.831460413706167 0.21286744 0.23326197 prediction 0.662920827412333 Functional Gain - NOP14 ENSG00000087269 CDS Human protein_coding chr4:2943382 chr4:2943383 nonsynonymous SNV 0.195 0 22 hPsi_associated_SNPs_26517 0 0 0 0 0 Nucleus 0.438718593038768 0.438718592963368 0 0 hPsi_site_20241 iPseU_CNN:0;iRNA_PseU:0 20242 chr20 31379409 31379409 1 + C A COAD 31379408 + 31379388 31379428 41 TGATGTCTTTCTCTTTTAGGTCTCTGCAGACAAACTGGTGG TGATGTCTTTCTCTTTTAGGTATCTGCAGACAAACTGGTGG < 41bp 0.512909890151241 0.844370273840834 0.23445573 0.4695994 prediction 0.662920767379187 Functional Gain - DNMT3B ENSG00000088305 CDS Human protein_coding chr20:31379408 chr20:31379409 synonymous SNV . 0 22 hPsi_associated_SNPs_26518 0 0 1 0 0 chromatin 0.438693158955539 0.438720384880649 0 0 hPsi_site_20242 iPseU_CNN:0;iRNA_PseU:0 Tonsillectomy 20243 chr8 143784567 143784567 1 + G A UCEC 143784566 + 143784546 143784586 41 CTCCGCTGGTTGTGCAGCGATGGAGAGACCCAAGCCAGAGG CTCCGCTGGTTGTGCAGCGATAGAGAGACCCAAGCCAGAGG < 41bp 0.557032455474859 0.888492767132023 0.19947895 0.2839651 prediction 0.662920623314327 Functional Gain - LY6K ENSG00000160886 CDS Human protein_coding chr8:143784566 chr8:143784567 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26519 0 0 1 0 2 nucleus 0.438604489739446 0.438734677507129 0 0 hPsi_site_20243 iPseU_CNN:0;iRNA_PseU:0 20244 chr7 75694225 75694225 1 + C A STAD 75694224 + 75694204 75694244 41 TGGAATGTTCCTTCGTTAAGTCACAGGAAACGGAATGTACC TGGAATGTTCCTTCGTTAAGTAACAGGAAACGGAATGTACC < 41bp 0.526657332944517 0.858115798995096 0.22645274 0.5290603 prediction 0.662916932101158 Functional Gain - MDH2 ENSG00000146701 CDS Human protein_coding chr7:75694224 chr7:75694225 stopgain 0.296 1 22 hPsi_associated_SNPs_26520 0 0 1 0 1 Cytosol 0.438718182446083 0.438792084090608 0.0581206000000001 0 hPsi_site_20244 iPseU_CNN:0.0581206000000001;iRNA_PseU:0 20245 chr22 32756727 32756727 1 + C A LAML 32756726 + 32756706 32756746 41 CCATTTTTGGCTCCTTCAATTCCACCTAATGGTGATCAAGG CCATTTTTGGCTCCTTCAATTACACCTAATGGTGATCAAGG < 41bp 0.494453145673027 0.831455290724728 0.29251227 0.656978 prediction 0.662910581449455 Functional Gain - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32756726 chr22:32756727 nonsynonymous SNV 0.198 0 22 hPsi_associated_SNPs_26521 0 0 0 0 0 exosome 0.43871859300002 0.437382919585781 0.313956 0 hPsi_site_20245 iPseU_CNN:0.313956;iRNA_PseU:0 20246 chr12 54448755 54448755 1 + C A HNSC 54448754 + 54448734 54448774 41 CCTGACCCGAAGGAGAAGGATCGAGATCGCCCACTCGCTGT CCTGACCCGAAGGAGAAGGATAGAGATCGCCCACTCGCTGT < 41bp 0.481569347460833 0.831447425222668 0.23836312 0.34155086 prediction 0.662894850445335 Functional Gain - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448754 chr12:54448755 synonymous SNV . 0 22 hPsi_associated_SNPs_26522 0 0 1 0 0 exosome 0.438718468152609 0.438807486634079 0 0 hPsi_site_20246 iPseU_CNN:0;iRNA_PseU:0 20247 chr12 106890626 106890626 1 + G A COAD 106890625 + 106890605 106890645 41 GGAGGCAGTAAAGTGAAGGATGTGTGTGAGGACCTCGTTCG GGAGGCAGTAAAGTGAAGGATATGTGTGAGGACCTCGTTCG < 41bp 0.567374596041505 0.898818179461847 0.40877604 0.57785773 prediction 0.662887166840685 Functional Gain - POLR3B ENSG00000013503 CDS Human protein_coding chr12:106890625 chr12:106890626 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26523 0 0 1 0 1 chromatin 0.438756538084295 0.43872930940865 0.15571546 0 hPsi_site_20247 iPseU_CNN:0.15571546;iRNA_PseU:0 20248 chr7 22769243 22769243 1 + G A BLCA 22769242 + 22769222 22769262 41 ACAAGCCAGAGCTGTGCAGATGAGTACAAAAGTCCTGATCC ACAAGCCAGAGCTGTGCAGATAAGTACAAAAGTCCTGATCC < 41bp 0.555465375958109 0.886904944391746 0.22914624 0.441409 prediction 0.662879136867272 Functional Gain - IL6 ENSG00000136244 CDS Human protein_coding chr7:22769242 chr7:22769243 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26524 0 0 0 0 1 Endoplasmic reticulum 0.43483886498626 0.439978428532245 0 0 hPsi_site_20248 iPseU_CNN:0;iRNA_PseU:0 20249 chr21 46596033 46596033 1 + G A BRCA 46596032 + 46596012 46596052 41 CCATGCTGCTGAGAAGGCCTTGAGGTCTTTCGTTCAGTTTC CCATGCTGCTGAGAAGGCCTTAAGGTCTTTCGTTCAGTTTC < 41bp 0.42885290833242 0.831433118496366 0.23931217 0.31527293 prediction 0.662866236992732 Functional Gain - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596032 chr21:46596033 synonymous SNV . 0 22 hPsi_associated_SNPs_26525 0 0 1 0 0 Nucleus 0.438718584005382 0.438718918594931 0 0 hPsi_site_20249 iPseU_CNN:0;iRNA_PseU:0 20250 chr14 20295865 20295865 1 + C A LUAD 20295864 + 20295844 20295884 41 CCGGATGTTGGTGGACTTCCTCTCTGCGAAGAAGATAATCT CCGGATGTTGGTGGACTTCCTATCTGCGAAGAAGATAATCT < 41bp 0.495375940511115 0.831417436872192 0.26428175 0.36173528 prediction 0.662834873744385 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20295864 chr14:20295865 synonymous SNV . 0 22 hPsi_associated_SNPs_26526 0 0 0 0 0 unknown 0.438718591958453 0.438716729664089 0 0 hPsi_site_20250 iPseU_CNN:0;iRNA_PseU:0 20251 chr12 113425046 113425046 1 + C A COAD 113425045 + 113425025 113425065 41 CCAGAAGTCCCTTGATGGGTTCACCATCCAGGTGTTCACAA CCAGAAGTCCCTTGATGGGTTAACCATCCAGGTGTTCACAA < 41bp 0.526427090217975 0.857843638698023 0.33040804 0.4685195 prediction 0.662833096960095 Functional Gain - OAS2 ENSG00000111335 CDS Human protein_coding chr12:113425045 chr12:113425046 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26527 0 0 0 0 1 exosome 0.438718592989019 0.438718592995102 0 0 hPsi_site_20251 iPseU_CNN:0;iRNA_PseU:0 20252 chr14 20612776 20612776 1 + G A SKCM 20612775 + 20612755 20612795 41 TACGCTTCGCAACCAGGAGGTGAAAGCTTCCATGAGGAAGT TACGCTTCGCAACCAGGAGGTAAAAGCTTCCATGAGGAAGT < 41bp 0.459869685549243 0.831411576975664 0.20646861 0.6440201 prediction 0.662823153951328 Functional Gain - OR4N5 ENSG00000184394 CDS Human protein_coding chr14:20612775 chr14:20612776 synonymous SNV . 0 22 hPsi_associated_SNPs_26528 0 0 0 0 0 unknown 0.438718667222113 0.438718592995102 0.2880402 0 hPsi_site_20252 iPseU_CNN:0.2880402;iRNA_PseU:0 20253 chr10 18266952 18266952 1 + C A LUAD 18266951 + 18266931 18266971 41 TGATCAGGACTATTCTAATTTCTCTTCATCCATGGAAAAAG TGATCAGGACTATTCTAATTTATCTTCATCCATGGAAAAAG < 41bp 0.47717409011069 0.831411335574047 0.29121464 0.29519945 prediction 0.662822671148094 Functional Gain - SLC39A12 ENSG00000148482 CDS Human protein_coding chr10:18266951 chr10:18266952 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_26529 0 0 0 0 1 exosome 0.438718592990893 0.438718592994721 0 0 hPsi_site_20253 iPseU_CNN:0;iRNA_PseU:0 20254 chr20 56139286 56139286 1 + G A CESC 56139285 + 56139265 56139305 41 TGTCGCTCCTGGGACTTCAGTGAAGACCAACCCCAATGCCA TGTCGCTCCTGGGACTTCAGTAAAGACCAACCCCAATGCCA < 41bp 0.415696532244255 0.831409245209742 0.35078734 0.54616785 prediction 0.662818490419484 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56139285 chr20:56139286 synonymous SNV . 0 22 hPsi_associated_SNPs_26530 0 0 1 0 1 exosome 0.43873979740972 0.438777544247964 0.0923357 0 hPsi_site_20254 iPseU_CNN:0.0923357;iRNA_PseU:0 20255 chrX 34961615 34961615 1 + C A LUAD 34961614 + 34961594 34961634 41 CCCAAGACTCGGGTGTCCAGTCTCCGCCCAGAGCCTCCCAA CCCAAGACTCGGGTGTCCAGTATCCGCCCAGAGCCTCCCAA < 41bp 0.528831708573814 0.86023960053985 0.26268625 0.55130696 prediction 0.662815783932073 Functional Gain - FAM47B ENSG00000189132 CDS Human protein_coding chrX:34961614 chrX:34961615 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_26531 0 0 0 0 0 unknown 0.438718299989708 0.438718592567245 0.10261392 0 hPsi_site_20255 iPseU_CNN:0.10261392;iRNA_PseU:0 20256 chr15 24923203 24923203 1 + C A UCEC 24923202 + 24923182 24923222 41 TTTACCTGGGGCTTCCTGGTTCTGGGAACACACAACCCAGC TTTACCTGGGGCTTCCTGGTTATGGGAACACACAACCCAGC < 41bp 0.483816704945977 0.831406566666544 0.43638602 0.5225771 prediction 0.662813133333088 Functional Gain - NPAP1 ENSG00000185823 CDS Human protein_coding chr15:24923202 chr15:24923203 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_26532 0 0 0 0 0 Nucleus 0.438718861278303 0.436786599708215 0.0451542 0 hPsi_site_20256 iPseU_CNN:0.0451542;iRNA_PseU:0 20257 chr19 43867178 43867178 1 + C A rs10421007 43867177 + 43867157 43867197 41 ACCCAGGATGGACGCTAGAGTCGACTGCTCCTAGGCTACAA ACCCAGGATGGACGCTAGAGTAGACTGCTCCTAGGCTACAA < 41bp 0.482456615971938 0.831405937374604 0.49135998 0.7156606 prediction 0.662811874749209 Functional Gain - CD177 ENSG00000272396 ncRNA_intronic Human antisense chr19:43867177 chr19:43867178 . . 0 22 hPsi_associated_SNPs_26533 0 0 0 0 0 exosome 0.438721910853129 0.438718814476948 0.4313212 0 hPsi_site_20257 iPseU_CNN:0.4313212;iRNA_PseU:0 20258 chr14 22181025 22181025 1 + G A OV 22181024 + 22181004 22181044 41 ATCGCTGCTCATCCTCCAGGTGCGGGAGGCAGATGCTGCTG ATCGCTGCTCATCCTCCAGGTACGGGAGGCAGATGCTGCTG < 41bp 0.521826027561647 0.853230662995371 0.21302581 0.87543416 prediction 0.662809270867448 Functional Gain - OR4E1;LINC02332 ENSG00000211776 CDS Human TR_V_gene chr14:22181024 chr14:22181025 synonymous SNV . 0 22 hPsi_associated_SNPs_26534 0 0 0 0 0 unknown 0.438740428524271 0.438728223112819 0.75086832 0 hPsi_site_20258 iPseU_CNN:0.75086832;iRNA_PseU:0 20259 chr12 48919915 48919915 1 + C A STAD 48919914 + 48919894 48919934 41 CCTCCTAGCTGTAAACATGGTCTTTTGTGAAGCCAAAATCA CCTCCTAGCTGTAAACATGGTATTTTGTGAAGCCAAAATCA < 41bp 0.479183448290856 0.83140402379822 0.1889027 0.26043078 prediction 0.66280804759644 Functional Gain - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48919914 chr12:48919915 synonymous SNV . 0 22 hPsi_associated_SNPs_26535 0 0 0 0 0 unknown 0.438650089794571 0.438707247040521 0 0 hPsi_site_20259 iPseU_CNN:0;iRNA_PseU:0 20260 chr15 91423977 91423977 1 + C A UCEC 91423976 + 91423956 91423996 41 GGGCCTTCATGACAACTCATTCCTGGGATGAGGATCCCTCT GGGCCTTCATGACAACTCATTACTGGGATGAGGATCCCTCT < 41bp 0.468625764241735 0.831403419526227 0.2115108 0.5962786 prediction 0.662806839052454 Functional Gain - FURIN ENSG00000140564 CDS Human protein_coding chr15:91423976 chr15:91423977 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_26536 0 0 1 0 2 Ribosome 0.438718783419269 0.447240894345999 0.1925572 0 hPsi_site_20260 iPseU_CNN:0.1925572;iRNA_PseU:0 20261 chr6 33652626 33652626 1 + G A rs41267659 33652625 + 33652605 33652645 41 AGGGGGCCACCAAGTTGGTATGCGACCTCATCACCAGCACC AGGGGGCCACCAAGTTGGTATACGACCTCATCACCAGCACC < 41bp 0.558982314581947 0.890382007122988 0.71770006 0.8790285 prediction 0.662799385082083 Functional Gain - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652625 chr6:33652626 nonsynonymous SNV 0.983 3 22 hPsi_associated_SNPs_26537 0 0 1 0 2 Endoplasmic reticulum 0.438712066348328 0.43871968764662 0.32265688 0 hPsi_site_20261 iPseU_CNN:0.32265688;iRNA_PseU:0 20262 chr1 1268020 1268020 1 + G A COAD 1268019 + 1267999 1268039 41 AGGACGTGGTGGGCCAGCGCTGCCCGCAGTGTGACTGCATC AGGACGTGGTGGGCCAGCGCTACCCGCAGTGTGACTGCATC < 41bp 0.440020646071108 0.831394985541848 0.27931964 0.8503951 prediction 0.662789971083695 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1268019 chr1:1268020 nonsynonymous SNV 0.059 4 22 hPsi_associated_SNPs_26538 0 0 0 0 0 chromatin 0.437786690459153 0.436240317457313 0.7007902 0 hPsi_site_20262 iPseU_CNN:0.7007902;iRNA_PseU:0 20263 chrX 56591210 56591210 1 + G A HNSC 56591209 + 56591189 56591229 41 GTGGGGAGTAGTTCCTCCTCTGGGGAAGGTACGCAGCCTTC GTGGGGAGTAGTTCCTCCTCTAGGGAAGGTACGCAGCCTTC < 41bp 0.433044853057149 0.831394748048059 0.3265342 0.44468904 prediction 0.662789496096119 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591209 chrX:56591210 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_26539 0 0 1 0 0 nucleus 0.438718595559223 0.438718599896194 0 0 hPsi_site_20263 iPseU_CNN:0;iRNA_PseU:0 20264 chr17 21207797 21207797 1 + G T BLCA 21207796 + 21207776 21207816 41 CATGTGAAGATGTGTGACTTTGGCATCAGTGGCTACTTGGT CATGTGAAGATGTGTGACTTTTGCATCAGTGGCTACTTGGT < 41bp 0.500231940909258 0.831626527133154 0.20824248 0.2823841 prediction 0.662789172447794 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21207796 chr17:21207797 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_26540 0 0 1 0 2 Ribosome 0.437827817696427 0.433712628855978 0 0 hPsi_site_20264 iPseU_CNN:0;iRNA_PseU:0 20265 chr3 48508966 48508966 1 + G A rs3135945 48508965 + 48508945 48508985 41 GACCTTGGCAGTAGCCACACTGTATGGACTATCCCTGGCCA GACCTTGGCAGTAGCCACACTATATGGACTATCCCTGGCCA < 41bp 0.557124779851544 0.888513400324345 0.45777285 0.6015885 prediction 0.662777240945602 Functional Gain - TREX1 ENSG00000213689 CDS Human protein_coding chr3:48508965 chr3:48508966 synonymous SNV . 0 22 hPsi_associated_SNPs_26541 3 0 1 0 0 Ribosome 0.449931633503998 0.439968812169414 0.203177 0 hPsi_site_20265 iPseU_CNN:0.203177;iRNA_PseU:0 20266 chr21 45389037 45389037 1 + G A rs116527564 45389036 + 45389016 45389056 41 TAAGAAGGAGCTGCTCTACGTGCCCCTCATCGGCTGGACGT TAAGAAGGAGCTGCTCTACGTACCCCTCATCGGCTGGACGT < 41bp 0.413573681993438 0.8313849465225 0.15849179 0.66442907 prediction 0.662769893045 Functional Gain - AGPAT3 ENSG00000160216 CDS Human protein_coding chr21:45389036 chr21:45389037 synonymous SNV . 0 22 hPsi_associated_SNPs_26542 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0.32885814 0 hPsi_site_20266 iPseU_CNN:0.32885814;iRNA_PseU:0 20267 chr15 43452969 43452969 1 + C A UCEC 43452968 + 43452948 43452988 41 GATCCCCTGGCATCATTTATTCTCCGTACTGATCACTACAT GATCCCCTGGCATCATTTATTATCCGTACTGATCACTACAT < 41bp 0.517598579325686 0.848982206584201 0.25521827 0.53399813 prediction 0.662767254517029 Functional Gain - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43452968 chr15:43452969 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26543 0 0 1 0 2 chromatin 0.438724420700288 0.438260587719131 0.0679962599999999 0 hPsi_site_20267 iPseU_CNN:0.0679962599999999;iRNA_PseU:0 20268 chr19 40712030 40712030 1 + G A rs145321643 40712029 + 40712009 40712049 41 GCGCAGCCGCCTGCTCAAGCTGCGGGAAGGCGGCAGCCACA GCGCAGCCGCCTGCTCAAGCTACGGGAAGGCGGCAGCCACA < 41bp 0.561768059103933 0.893148497824933 0.18311703 0.5741759 prediction 0.662760877442 Functional Gain - MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40712029 chr19:40712030 synonymous SNV . 0 22 hPsi_associated_SNPs_26544 0 0 1 0 1 Endoplasmic reticulum 0.438712399761453 0.438713805343383 0.1483518 0 hPsi_site_20268 iPseU_CNN:0.1483518;iRNA_PseU:0 20269 chr19 58117885 58117885 1 + C A BRCA 58117884 + 58117864 58117904 41 AGTGCAGTGAATGTGGGAAATCTTTTAGCCACAGCACTAAC AGTGCAGTGAATGTGGGAAATATTTTAGCCACAGCACTAAC < 41bp 0.518004765551158 0.849383286588365 0.23923314 0.4183094 prediction 0.662757042074415 Functional Gain - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58117884 chr19:58117885 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_26545 0 0 0 0 0 Nucleus 0.438673099064646 0.438711534823504 0 0 hPsi_site_20269 iPseU_CNN:0;iRNA_PseU:0 20270 chr17 42852989 42852989 1 + G A UCEC 42852988 + 42852968 42853008 41 GTGGCAACTGCTGCAAGAAATGCACCCTGACTCACGACGCC GTGGCAACTGCTGCAAGAAATACACCCTGACTCACGACGCC < 41bp 0.572942033573985 0.904318484231885 0.3472422 0.6418679 prediction 0.6627529013158 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42852988 chr17:42852989 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_26546 0 0 0 0 2 chromatin 0.438721888869876 0.438629604395037 0.2837358 0 hPsi_site_20270 iPseU_CNN:0.2837358;iRNA_PseU:0 20271 chr19 7619897 7619897 1 + G A CESC 7619896 + 7619876 7619916 41 GGCTAAATATGCGCAGCTGGTGCTCGGGGCACCTGCACCTG GGCTAAATATGCGCAGCTGGTACTCGGGGCACCTGCACCTG < 41bp 0.423153831896373 0.831375899582689 0.28770664 0.93047357 prediction 0.662751799165378 Functional Gain - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7619896 chr19:7619897 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_26547 0 0 0 0 1 Ribosome 0.438718592995187 0.438718592999421 0.86094714 0 hPsi_site_20271 iPseU_CNN:0.86094714;iRNA_PseU:0 20272 chr10 35437375 35437375 1 + G A rs146676068 35437374 + 35437354 35437394 41 ACAGAGAGCAAGTCTGCTCATGTGCAGACTCAGACTGGCCA ACAGAGAGCAAGTCTGCTCATATGCAGACTCAGACTGGCCA < 41bp 0.49006525795272 0.831375838130303 0.32369882 0.51771444 prediction 0.662751676260606 Functional Gain - CREM ENSG00000095794 CDS Human protein_coding chr10:35437374 chr10:35437375 nonsynonymous SNV 0.615 0 22 hPsi_associated_SNPs_26548 0 0 1 0 2 Ribosome 0.427440547898283 0.420436032700921 0.03542888 0 hPsi_site_20272 iPseU_CNN:0.03542888;iRNA_PseU:0 20273 chr1 206648289 206648289 1 + G A LUAD 206648288 + 206648268 206648308 41 GTGCTGGAGAGCCCTGAGAATGCCTTTGGGCTGCCTGAGGA GTGCTGGAGAGCCCTGAGAATACCTTTGGGCTGCCTGAGGA < 41bp 0.41153779889663 0.831366600774143 0.2266241 0.30243903 prediction 0.662733201548287 Functional Gain - IKBKE ENSG00000143466 CDS Human other chr1:206648288 chr1:206648289 nonsynonymous SNV 0.540 0 22 hPsi_associated_SNPs_26549 0 0 0 0 2 Cytosol 0.438717163706622 0.438717672510027 0 0 hPsi_site_20273 iPseU_CNN:0;iRNA_PseU:0 20274 chr12 6926420 6926420 1 + G A rs34841304 6926419 + 6926399 6926439 41 GCGGGAGAAGGCGGTGTGGGTGCTGAACCCTGAGGCGGGGA GCGGGAGAAGGCGGTGTGGGTACTGAACCCTGAGGCGGGGA < 41bp 0.428703367009716 0.831366443449893 0.29368848 0.9049039 prediction 0.662732886899785 Functional Gain - CD4 ENSG00000010610 CDS Human protein_coding chr12:6926419 chr12:6926420 synonymous SNV . 0 22 hPsi_associated_SNPs_26550 0 0 0 0 0 Endoplasmic reticulum 0.43871551919057 0.438758183549754 0.8098078 0 hPsi_site_20274 iPseU_CNN:0.8098078;iRNA_PseU:0 20275 chr1 165513649 165513649 1 + G A PAAD 165513648 + 165513628 165513668 41 GTCAAGCCCAAGAAGTAATCTGCACAGGGAAGCAGTTAACC GTCAAGCCCAAGAAGTAATCTACACAGGGAAGCAGTTAACC < 41bp 0.42615869016449 0.831363103998095 0.22938728 0.29073513 prediction 0.662726207996189 Functional Gain - LRRC52 ENSG00000162763 CDS Human protein_coding chr1:165513648 chr1:165513649 nonsynonymous SNV 0.156 5 22 hPsi_associated_SNPs_26551 0 0 0 0 0 unknown 0.438718592904192 0.438718592981115 0 0 hPsi_site_20275 iPseU_CNN:0;iRNA_PseU:0 20276 chr10 103920269 103920269 1 + C A UCEC 103920268 + 103920248 103920288 41 CAGCTGGTACCACCAAGAATTCTTCAAATAAGCCAGCTGTC CAGCTGGTACCACCAAGAATTATTCAAATAAGCCAGCTGTC < 41bp 0.46703040305066 0.831346604955305 0.2365435 0.35547543 prediction 0.662693209910609 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920268 chr10:103920269 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_26552 0 0 1 0 1 Nucleus 0.439070694146736 0.438744212698745 0 0 hPsi_site_20276 iPseU_CNN:0;iRNA_PseU:0 20277 chr6 3019894 3019894 1 + G A rs201164276 3019893 + 3019873 3019913 41 GGCACTTCGGGCAATAACTCTGTGGCACGTGGGCATCACGT GGCACTTCGGGCAATAACTCTATGGCACGTGGGCATCACGT < 41bp 0.551017544830595 0.882360377990468 0.47611117 0.62899196 prediction 0.662685666319744 Functional Gain - NQO2 ENSG00000124588 UTR3 Human protein_coding chr6:3019893 chr6:3019894 . . 0 22 hPsi_associated_SNPs_26553 0 0 1 0 0 Ribosome 0.438719186102162 0.438721550031257 0.25798392 0 hPsi_site_20277 iPseU_CNN:0.25798392;iRNA_PseU:0 20278 chr19 46511464 46511464 1 + C A rs201075069 46511463 + 46511443 46511483 41 CGTGGTTCTGCAGGGCATCATCCGGTCACTGAAGGAGGAAC CGTGGTTCTGCAGGGCATCATACGGTCACTGAAGGAGGAAC < 41bp 0.471978153700235 0.831341721664908 0.22027758 0.37695518 prediction 0.662683443329816 Functional Gain - CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46511463 chr19:46511464 synonymous SNV . 0 22 hPsi_associated_SNPs_26554 0 0 0 0 2 chromatin 0.438439129052926 0.439092440854611 0 0 hPsi_site_20278 iPseU_CNN:0;iRNA_PseU:0 20279 chr17 1634506 1634506 1 + G A BLCA 1634505 + 1634485 1634525 41 ATCCTGCCCCGGATCAGCCATGAGGTCCTGCTGCCCGTGCT ATCCTGCCCCGGATCAGCCATAAGGTCCTGCTGCCCGTGCT < 41bp 0.427021272385521 0.831336269112171 0.2181342 0.25812107 prediction 0.662672538224342 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1634505 chr17:1634506 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_26555 0 0 0 0 1 Endoplasmic reticulum 0.438718528855846 0.438718593893542 0 0 hPsi_site_20279 iPseU_CNN:0;iRNA_PseU:0 20280 chr3 127379869 127379869 1 + C A BLCA 127379868 + 127379848 127379888 41 TTGGCTCTAGAACCTCAGCCTCTTCCCCACTGGCCCCTGGA TTGGCTCTAGAACCTCAGCCTATTCCCCACTGGCCCCTGGA < 41bp 0.519630830133793 0.850964515236359 0.75657177 0.8578747 prediction 0.662667370205132 Functional Gain - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379868 chr3:127379869 nonsynonymous SNV 0.018 1 22 hPsi_associated_SNPs_26556 0 0 1 0 0 chromatin 0.438718592995106 0.438718437057469 0.20260586 0 hPsi_site_20280 iPseU_CNN:0.20260586;iRNA_PseU:0 20281 chr21 40763712 40763712 1 + C A LUAD 40763711 + 40763691 40763731 41 TCAGTGAAAGCTCGGACAGCTCAATTAGCCAAGATAAAATG TCAGTGAAAGCTCGGACAGCTAAATTAGCCAAGATAAAATG < 41bp 0.482837745884201 0.831327857812604 0.21487612 0.24527061 prediction 0.662655715625208 Functional Gain - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40763711 chr21:40763712 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_26557 0 0 1 0 1 unknown 0.445586051598064 0.437007550145508 0 0 hPsi_site_20281 iPseU_CNN:0;iRNA_PseU:0 20282 chr15 91504945 91504945 1 + C A LUAD 91504944 + 91504924 91504964 41 GCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACA GCAACTCCAAGTAAAGGCTGTAACCTGTGGGCCGTGGAACA < 41bp 0.523918462813676 0.855240854646159 0.21236041 0.6533585 prediction 0.662644783664966 Functional Gain - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91504944 chr15:91504945 synonymous SNV . 0 22 hPsi_associated_SNPs_26558 0 0 1 0 1 Ribosome 0.438717334095473 0.438718590952532 0.306717 0 hPsi_site_20282 iPseU_CNN:0.306717;iRNA_PseU:0 20283 chr6 36562175 36562175 1 + G A rs17553386 36562174 + 36562154 36562194 41 CGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGG CGCCGGGTGAGTGAGAGAGTTAGTTGGTGTTGGGCCGGAGG < 41bp 0.462417149436548 0.831321589880624 0.33922434 0.777472 prediction 0.662643179761248 Functional Gain - SRSF3 ENSG00000112081 UTR5 Human protein_coding chr6:36562174 chr6:36562175 . . 0 22 hPsi_associated_SNPs_26559 0 0 1 0 1 Ribosome 0.438619836422067 0.438698487630498 0.554944 0 hPsi_site_20283 iPseU_CNN:0.554944;iRNA_PseU:0 20284 chr10 86008773 86008773 1 + G A SKCM 86008772 + 86008752 86008792 41 GCAGCAGTGCAGCCATCGCATGGGGGCGTTATCACCACTAC GCAGCAGTGCAGCCATCGCATAGGGGCGTTATCACCACTAC < 41bp 0.410179416181483 0.831321437642423 0.3018973 0.41367012 prediction 0.662642875284846 Functional Gain - RGR ENSG00000148604 CDS Human protein_coding chr10:86008772 chr10:86008773 stopgain 0.977 1 22 hPsi_associated_SNPs_26560 0 0 0 0 2 unknown 0.438718221886764 0.446201178801375 0 0 hPsi_site_20284 iPseU_CNN:0;iRNA_PseU:0 20285 chr5 177547645 177547645 1 + G A UCEC 177547644 + 177547624 177547664 41 GAGCCGTGCTGCCCGAGACCTGTGAGGAGCTCAAGAGGGGC GAGCCGTGCTGCCCGAGACCTATGAGGAGCTCAAGAGGGGC < 41bp 0.424373122436665 0.831313302084005 0.24709344 0.3176269 prediction 0.662626604168011 Functional Gain - N4BP3 ENSG00000145911 CDS Human protein_coding chr5:177547644 chr5:177547645 nonsynonymous SNV 0.057 0 22 hPsi_associated_SNPs_26561 0 0 0 0 1 chromatin 0.438718593022588 0.438718594423548 0 0 hPsi_site_20285 iPseU_CNN:0;iRNA_PseU:0 20286 chr9 120476425 120476425 1 + C A UCEC 120476424 + 120476404 120476444 41 GTATGGTAGAGGTGAAAACATCTATGATGCCTTTGTTATCT GTATGGTAGAGGTGAAAACATATATGATGCCTTTGTTATCT < 41bp 0.512118001913068 0.843430139081927 0.3130697 0.29119337 prediction 0.662624274337716 Functional Gain - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120476424 chr9:120476425 synonymous SNV . 0 22 hPsi_associated_SNPs_26562 0 0 0 0 0 cytosol 0.43871902466292 0.438718414532909 0 0 hPsi_site_20286 iPseU_CNN:0;iRNA_PseU:0 20287 chr6 43745372 43745372 1 + G A UCEC 43745371 + 43745351 43745391 41 TGACGAGGGCCTGGAGTGTGTGCCCACTGAGGAGTCCAACA TGACGAGGGCCTGGAGTGTGTACCCACTGAGGAGTCCAACA < 41bp 0.568582439585933 0.899893111429394 0.3380438 0.6775086 prediction 0.662621343686922 Functional Gain - VEGFA ENSG00000112715 CDS Human protein_coding chr6:43745371 chr6:43745372 synonymous SNV . 0 22 hPsi_associated_SNPs_26563 0 0 1 0 1 Nucleus 0.438692867511721 0.438714356098302 0.3550172 0 hPsi_site_20287 iPseU_CNN:0.3550172;iRNA_PseU:0 20288 chr14 24785406 24785406 1 + C A UCEC 24785405 + 24785385 24785425 41 GCACCGGGCCTTCCATCTAATCTTCGAGGCTGTCACGGGCT GCACCGGGCCTTCCATCTAATATTCGAGGCTGTCACGGGCT < 41bp 0.538106026432458 0.869413488542269 0.4628148 0.7207017 prediction 0.662614924219622 Functional Gain - LTB4R ENSG00000213903 CDS Human protein_coding chr14:24785405 chr14:24785406 synonymous SNV . 0 22 hPsi_associated_SNPs_26564 0 0 1 0 0 Nucleus 0.438717116212446 0.438719460846982 0.4414034 0 hPsi_site_20288 iPseU_CNN:0.4414034;iRNA_PseU:0 20289 chr15 40751214 40751214 1 + C A UCEC 40751213 + 40751193 40751233 41 GAGGAGGAAGTCGGGACCTGTCTCCAGAGCCAGCACCCGAT GAGGAGGAAGTCGGGACCTGTATCCAGAGCCAGCACCCGAT < 41bp 0.461601661907452 0.831305465805982 0.5235341 0.8918865 prediction 0.662610931611963 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751213 chr15:40751214 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26565 0 0 1 0 0 chromatin 0.438718593095612 0.438716343415405 0.7367048 0 hPsi_site_20289 iPseU_CNN:0.7367048;iRNA_PseU:0 20290 chr11 64988618 64988618 1 + C A COAD 64988617 + 64988597 64988637 41 CATCTCTGCTCCTTTCCTGATCTTTTTCCTCTATTCTTGGT CATCTCTGCTCCTTTCCTGATATTTTTCCTCTATTCTTGGT < 41bp 0.517111076739772 0.848414573185246 0.45792863 0.72112274 prediction 0.662606992890948 Functional Gain - SLC22A20 ENSG00000197847 ncRNA_exonic Human transcribed_unitary_pseudogene chr11:64988617 chr11:64988618 . . 0 22 hPsi_associated_SNPs_26566 0 0 0 0 1 unknown 0.438718579584587 0.438718880278002 0.44224548 0 hPsi_site_20290 iPseU_CNN:0.44224548;iRNA_PseU:0 20291 chr10 94836761 94836761 1 + C A UCEC 94836760 + 94836740 94836780 41 CTGGAATGTTATCTACAGTATCTGTGATACTCATGATGTGG CTGGAATGTTATCTACAGTATATGTGATACTCATGATGTGG < 41bp 0.488800818157269 0.831302733240712 0.36954302 0.7402483 prediction 0.662605466481424 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94836760 chr10:94836761 synonymous SNV . 0 22 hPsi_associated_SNPs_26567 0 0 0 0 1 Endoplasmic reticulum 0.438717669320432 0.439493294162747 0.4804966 0 hPsi_site_20291 iPseU_CNN:0.4804966;iRNA_PseU:0 20292 chr13 114154387 114154387 1 + G A LUAD 114154386 + 114154366 114154406 41 TTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTA TTGGGTCTTAGCATGCTGATTAACTCCCAGAACAACCAGTA < 41bp 0.421182120558381 0.831301677401622 0.1885693 0.5339094 prediction 0.662603354803244 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114154386 chr13:114154387 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_26568 0 0 1 0 1 Ribosome 0.438718625586312 0.438718676022847 0.0678188 0 hPsi_site_20292 iPseU_CNN:0.0678188;iRNA_PseU:0 20293 chrX 129536340 129536340 1 + C A UCEC 129536339 + 129536319 129536359 41 CAAGGACAGCGCCTGGATCTTCCTGGGTGAGGTCCACATCT CAAGGACAGCGCCTGGATCTTACTGGGTGAGGTCCACATCT < 41bp 0.476818473063603 0.831299231006782 0.28522587 0.78598684 prediction 0.662598462013564 Functional Gain - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129536339 chrX:129536340 nonsynonymous SNV 0.976 3 22 hPsi_associated_SNPs_26569 0 0 1 0 1 exosome 0.438718594180318 0.438718488848237 0.57197368 0 hPsi_site_20293 iPseU_CNN:0.57197368;iRNA_PseU:0 20294 chr15 34647863 34647863 1 + G A SKCM 34647862 + 34647842 34647882 41 GCTGGGGGCGCCGCTTGCCTTGGAAAGGTTTCTTCTTCAGG GCTGGGGGCGCCGCTTGCCTTAGAAAGGTTTCTTCTTCAGG < 41bp 0.416438610684346 0.831295339085837 0.23225823 0.36426193 prediction 0.662590678171673 Functional Gain - NUTM1 ENSG00000184507 CDS Human protein_coding chr15:34647862 chr15:34647863 nonsynonymous SNV 0.182 3 22 hPsi_associated_SNPs_26570 0 0 0 0 0 exosome 0.438718567401124 0.438718593814735 0 0 hPsi_site_20294 iPseU_CNN:0;iRNA_PseU:0 20295 chr19 3942082 3942082 1 + C A COAD 3942081 + 3942061 3942101 41 CGCAGCCTTTCTGATTTCAGTCTACCTGGACGGCATGAAGT CGCAGCCTTTCTGATTTCAGTATACCTGGACGGCATGAAGT < 41bp 0.485240610849473 0.831293139270227 0.34332246 0.33175087 prediction 0.662586278540453 Functional Gain - NMRK2 ENSG00000077009 CDS Human protein_coding chr19:3942081 chr19:3942082 nonsynonymous SNV 0.711 0 22 hPsi_associated_SNPs_26571 0 0 0 0 1 exosome 0.438719435064171 0.441244841839626 0 0 hPsi_site_20295 iPseU_CNN:0;iRNA_PseU:0 20296 chr3 130282204 130282204 1 + C A UCEC 130282203 + 130282183 130282223 41 GGAGGCTCACAGGACTTATTTCTCTGCACCCGCAAATGGGA GGAGGCTCACAGGACTTATTTATCTGCACCCGCAAATGGGA < 41bp 0.470026130794446 0.831290533265639 0.27682522 0.34510565 prediction 0.662581066531278 Functional Gain - COL6A6 ENSG00000206384 CDS Human protein_coding chr3:130282203 chr3:130282204 nonsynonymous SNV 0.074 3 22 hPsi_associated_SNPs_26572 0 0 0 0 0 exosome 0.438718992450535 0.438718597159635 0 0 hPsi_site_20296 iPseU_CNN:0;iRNA_PseU:0 20297 chr16 67660532 67660532 1 + G T UCEC 67660531 + 67660511 67660551 41 TACTGTGATGCTGTGTTTCATGAGCGCTATGCCCTCATCCA TACTGTGATGCTGTGTTTCATTAGCGCTATGCCCTCATCCA < 41bp 0.510380313058448 0.841669226849336 0.2642032 0.5178513 prediction 0.662577827581774 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67660531 chr16:67660532 stopgain 1.000 1 22 hPsi_associated_SNPs_26573 0 0 1 0 2 Nucleus 0.438723996750198 0.437570253987044 0.0357026 0 hPsi_site_20297 iPseU_CNN:0.0357026;iRNA_PseU:0 20298 chr1 150471757 150471757 1 + C A UCEC 150471756 + 150471736 150471776 41 CAACTCTGGAGATGGTGCCTTCTATGGACCTAAGGTAAGCT CAACTCTGGAGATGGTGCCTTATATGGACCTAAGGTAAGCT < 41bp 0.535484555973371 0.86677260533697 0.34542358 0.41011572 prediction 0.662576098727198 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150471756 chr1:150471757 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26574 0 0 0 2 2 Ribosome 0.437392423933744 0.438893984235456 0 0 hPsi_site_20298 iPseU_CNN:0;iRNA_PseU:0 20299 chr2 27247038 27247038 1 + C A COAD 27247037 + 27247017 27247057 41 TATTCAGTGGTTTAAGAAATTCTTTGACGCAAACTATGATG TATTCAGTGGTTTAAGAAATTATTTGACGCAAACTATGATG < 41bp 0.479171551401221 0.831287433213842 0.34676555 0.48120514 prediction 0.662574866427683 Functional Gain - MAPRE3 ENSG00000084764 CDS Human protein_coding chr2:27247037 chr2:27247038 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26575 0 0 0 0 1 Cytosol 0.438718592999299 0.438718592698779 0 0 hPsi_site_20299 iPseU_CNN:0;iRNA_PseU:0 20300 chr22 37334464 37334464 1 + C A BRCA 37334463 + 37334443 37334483 41 GTGCCCCAGGTGCCCGTCATTCAGCTCTTCAAAGCCCTGAA GTGCCCCAGGTGCCCGTCATTAAGCTCTTCAAAGCCCTGAA < 41bp 0.523342172778325 0.854627280899608 0.44835275 0.56974304 prediction 0.662570216242566 Functional Gain - CSF2RB ENSG00000100368 CDS Human protein_coding chr22:37334463 chr22:37334464 nonsynonymous SNV 0.195 2 22 hPsi_associated_SNPs_26576 0 0 0 0 0 Endoplasmic reticulum 0.438722413548912 0.438718677012893 0.13948608 0 hPsi_site_20300 iPseU_CNN:0.13948608;iRNA_PseU:0 20301 chrX 100668321 100668321 1 + G A LGG 100668320 + 100668300 100668340 41 AGTGACTATCAGTCAAACCTTGCTTAGGTAGAGAAGGAGCA AGTGACTATCAGTCAAACCTTACTTAGGTAGAGAAGGAGCA < 41bp 0.535094234830671 0.866376906372707 0.28948802 0.30729884 prediction 0.662565343084073 Functional Gain - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668320 chrX:100668321 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_26577 0 0 1 0 0 Cytosol 0.438705708555014 0.438719994924298 0 0 hPsi_site_20301 iPseU_CNN:0;iRNA_PseU:0 20302 chr6 1313520 1313520 1 + G A BLCA 1313519 + 1313499 1313539 41 CCTGGGGCAAGGACAACTACTGGATGCTCAACCCCAACAGC CCTGGGGCAAGGACAACTACTAGATGCTCAACCCCAACAGC < 41bp 0.512380738883405 0.843662041009794 0.3372559 0.5310617 prediction 0.662562604252778 Functional Gain - FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313519 chr6:1313520 stopgain 0.290 0 22 hPsi_associated_SNPs_26578 0 0 1 0 0 exosome 0.438718592995102 0.438718457332282 0.0621233999999999 0 hPsi_site_20302 iPseU_CNN:0.0621233999999999;iRNA_PseU:0 20303 chr3 155633925 155633925 1 + G A BLCA 155633924 + 155633904 155633944 41 CTTGTTGCAAGTGGCAAAGCTGAACTCATCAAAACCCATCA CTTGTTGCAAGTGGCAAAGCTAAACTCATCAAAACCCATCA < 41bp 0.424519118790135 0.831278612770521 0.3268063 0.80721724 prediction 0.662557225541043 Functional Gain - GMPS ENSG00000163655 CDS Human protein_coding chr3:155633924 chr3:155633925 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_26579 0 0 1 0 1 Nucleus 0.438711470205814 0.438965176732895 0.61443448 0 hPsi_site_20303 iPseU_CNN:0.61443448;iRNA_PseU:0 20304 chr3 17051886 17051886 1 + C A BLCA 17051885 + 17051865 17051905 41 GAAATTTATTTCCTTTTAGTTCAGTTTTCAAGCAATAAAGA GAAATTTATTTCCTTTTAGTTAAGTTTTCAAGCAATAAAGA < 41bp 0.50912798725764 0.840402726150316 0.274298 0.4943446 prediction 0.662549477785352 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17051885 chr3:17051886 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26580 0 0 1 0 0 nucleus 0.43843616460035 0.439587679909278 0 0 hPsi_site_20304 iPseU_CNN:0;iRNA_PseU:0 20305 chr1 28293183 28293183 1 + G A UCEC 28293182 + 28293162 28293202 41 CCGAGTCCTGGCTGTGGCCCTGTTCTCAGCCCTCTTCCCCA CCGAGTCCTGGCTGTGGCCCTATTCTCAGCCCTCTTCCCCA < 41bp 0.564562115398779 0.895828375933373 0.2703911 0.5982511 prediction 0.662532521069187 Functional Gain - XKR8 ENSG00000158156 CDS Human protein_coding chr1:28293182 chr1:28293183 synonymous SNV . 0 22 hPsi_associated_SNPs_26581 0 0 1 0 0 Endoplasmic reticulum 0.438718526243747 0.438718658183088 0.1965022 0 hPsi_site_20305 iPseU_CNN:0.1965022;iRNA_PseU:0 20306 chr1 120056914 120056914 1 + C A GBM 120056913 + 120056893 120056933 41 CCGAGGACAGTTCTACTATATCTCAGATGACACGCCTCACC CCGAGGACAGTTCTACTATATATCAGATGACACGCCTCACC < 41bp 0.532233375815908 0.863498447937203 0.30658954 0.43383864 prediction 0.66253014424259 Functional Gain - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120056913 chr1:120056914 synonymous SNV . 0 22 hPsi_associated_SNPs_26582 0 0 0 0 0 exosome 0.43871825992957 0.438719961029122 0 0 hPsi_site_20306 iPseU_CNN:0;iRNA_PseU:0 20307 chr3 98110293 98110293 1 + G A STAD 98110292 + 98110272 98110312 41 TTCATGTATGCTCGACCAGGTGCAGTTAATGAAGGGGATAA TTCATGTATGCTCGACCAGGTACAGTTAATGAAGGGGATAA < 41bp 0.483292961278878 0.831265024241028 0.40086514 0.9031774 prediction 0.662530048482055 Functional Gain - OR5K3 ENSG00000206536 CDS Human protein_coding chr3:98110292 chr3:98110293 nonsynonymous SNV 0.025 0 22 hPsi_associated_SNPs_26583 0 0 0 0 0 unknown 0.438718544829503 0.438715370809588 0.8063548 0 hPsi_site_20307 iPseU_CNN:0.8063548;iRNA_PseU:0 20308 chr19 58131551 58131551 1 + G A CESC 58131550 + 58131530 58131570 41 TGTTGGCATGAAGTGAAGGATGAAGAGTCATCTTCTGAACA TGTTGGCATGAAGTGAAGGATAAAGAGTCATCTTCTGAACA < 41bp 0.447553159828806 0.831263470573251 0.35461468 0.5164601 prediction 0.662526941146502 Functional Gain - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58131550 chr19:58131551 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_26584 0 0 1 0 1 Cytosol 0.438718717798988 0.438720495904639 0.0329202 0 hPsi_site_20308 iPseU_CNN:0.0329202;iRNA_PseU:0 20309 chr18 29055985 29055985 1 + C A COAD 29055984 + 29055964 29056004 41 GGTCTGTCCAGCCAGCTGTTTCCATCCCTGACCCTCTGCAG GGTCTGTCCAGCCAGCTGTTTACATCCCTGACCCTCTGCAG < 41bp 0.526106545556182 0.857367843233807 0.65123004 0.84219486 prediction 0.662522595355249 Functional Gain - DSG3 ENSG00000134757 CDS Human protein_coding chr18:29055984 chr18:29055985 nonsynonymous SNV 0.350 1 22 hPsi_associated_SNPs_26585 0 0 0 0 0 Nucleus 0.438718574160981 0.438718282648298 0.38192964 0 hPsi_site_20309 iPseU_CNN:0.38192964;iRNA_PseU:0 20310 chrX 100880885 100880885 1 + C A UCEC 100880884 + 100880864 100880904 41 AAAGAAGTTATTCTTAAACTTCTGGTCATATTTGAGAACAT AAAGAAGTTATTCTTAAACTTATGGTCATATTTGAGAACAT < 41bp 0.49374724447091 0.831257245644176 0.2565093 0.32484367 prediction 0.662514491288353 Functional Gain - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880884 chrX:100880885 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26586 0 0 1 0 0 Endoplasmic reticulum 0.438718592945829 0.438718507496533 0 0 hPsi_site_20310 iPseU_CNN:0;iRNA_PseU:0 20311 chr5 178459762 178459762 1 + C A UCEC 178459761 + 178459741 178459781 41 ATGTGGAAAAGCCTTCAGTTTCACCACATCTCTTATTGGAC ATGTGGAAAAGCCTTCAGTTTAACCACATCTCTTATTGGAC < 41bp 0.521448645194749 0.85270357845355 0.27796912 0.35195863 prediction 0.662509866517601 Functional Gain - ZNF879 ENSG00000234284 CDS Human protein_coding chr5:178459761 chr5:178459762 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26587 0 0 0 0 0 exosome 0.43871957088484 0.438718197741442 0 0 hPsi_site_20311 iPseU_CNN:0;iRNA_PseU:0 20312 chr10 103988731 103988731 1 + G A OV 103988730 + 103988710 103988750 41 ACCATGAACTTTGGTGTTCATGCCATCATGTACACCTACTA ACCATGAACTTTGGTGTTCATACCATCATGTACACCTACTA < 41bp 0.564617422451306 0.895871206972655 0.2642486 0.3784966 prediction 0.662507569042696 Functional Gain - ELOVL3 ENSG00000119915 CDS Human protein_coding chr10:103988730 chr10:103988731 nonsynonymous SNV 0.170 0 22 hPsi_associated_SNPs_26588 0 0 0 0 0 exosome 0.427244882984932 0.444773076851054 0 0 hPsi_site_20312 iPseU_CNN:0;iRNA_PseU:0 20313 chr1 110257865 110257865 1 + G A LUSC 110257864 + 110257844 110257884 41 CTTCATCTCCCGCTTTGAGGTGATGCCCCCATCCTCCTTTC CTTCATCTCCCGCTTTGAGGTAATGCCCCCATCCTCCTTTC < 41bp 0.56392571421874 0.895178641217371 0.31892696 0.9167131 prediction 0.662505853997262 Functional Gain - GSTM5 ENSG00000134201 CDS Human protein_coding chr1:110257864 chr1:110257865 synonymous SNV . 0 22 hPsi_associated_SNPs_26589 0 0 0 0 0 Cytosol 0.438719627930413 0.438718590477438 0.8334262 0 hPsi_site_20313 iPseU_CNN:0.8334262;iRNA_PseU:0 20314 chr16 89924911 89924911 1 + C A LUSC 89924910 + 89924890 89924930 41 AAATGGAAGAGATGAATACATCTGAGGTCAGAACCCATGGG AAATGGAAGAGATGAATACATATGAGGTCAGAACCCATGGG < 41bp 0.529944592667246 0.861196882829447 0.30009907 0.45273066 prediction 0.662504580324402 Functional Gain - SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89924910 chr16:89924911 nonsynonymous SNV 0.731 4 22 hPsi_associated_SNPs_26590 0 0 1 0 1 Cytosol 0.438718592237781 0.438718593179456 0 0 hPsi_site_20314 iPseU_CNN:0;iRNA_PseU:0 20315 chr19 16799026 16799026 1 + G A UCEC 16799025 + 16799005 16799045 41 GGGCTACATCTGCCCCGTGCTGTTTGGTTCGGCCTGCGGGG GGGCTACATCTGCCCCGTGCTATTTGGTTCGGCCTGCGGGG < 41bp 0.56569312745706 0.89693928773328 0.43543935 0.69194907 prediction 0.66249232055244 Functional Gain - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16799025 chr19:16799026 synonymous SNV . 0 22 hPsi_associated_SNPs_26591 0 0 0 0 1 Ribosome 0.438718340537723 0.43871798908418 0.38389814 0 hPsi_site_20315 iPseU_CNN:0.38389814;iRNA_PseU:0 20316 chrX 153421840 153421840 1 + G A ESCA 153421839 + 153421819 153421859 41 AGTGACGCGCATGGTGGTGGTGATGATCTTTGCGTACTGCG AGTGACGCGCATGGTGGTGGTAATGATCTTTGCGTACTGCG < 41bp 0.568977441590431 0.900213114027057 0.279414 0.7375738 prediction 0.662471344873252 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153421839 chrX:153421840 synonymous SNV . 0 22 hPsi_associated_SNPs_26592 0 0 0 0 1 unknown 0.438720308439211 0.438718375835829 0.4751476 0 hPsi_site_20316 iPseU_CNN:0.4751476;iRNA_PseU:0 20317 chr19 44777800 44777800 1 + G A UCEC 44777799 + 44777779 44777819 41 CTTCAGTCAGGGCTCACATCTGCAACCTCATCAGAGAGTCA CTTCAGTCAGGGCTCACATCTACAACCTCATCAGAGAGTCA < 41bp 0.419562803040488 0.831233930249747 0.2843228 0.62612295 prediction 0.662467860499494 Functional Gain - ZNF233 ENSG00000159915 CDS Human protein_coding chr19:44777799 chr19:44777800 synonymous SNV . 0 22 hPsi_associated_SNPs_26593 0 0 0 0 0 chromatin 0.438718624885095 0.438718593253062 0.2522459 0 hPsi_site_20317 iPseU_CNN:0.2522459;iRNA_PseU:0 20318 chr22 42293122 42293122 1 + G A rs147747695 42293121 + 42293101 42293141 41 TGTGGACTCTGTGGGGGTTATGAGCCCCCCACTCTCCAGGA TGTGGACTCTGTGGGGGTTATAAGCCCCCCACTCTCCAGGA < 41bp 0.422546838281538 0.83122591922591 0.27410084 0.628496 prediction 0.66245183845182 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42293121 chr22:42293122 nonsynonymous SNV 0.607 0 22 hPsi_associated_SNPs_26594 0 0 1 0 2 Ribosome 0.438718099050526 0.438718568108502 0.256992 0 hPsi_site_20318 iPseU_CNN:0.256992;iRNA_PseU:0 20319 chr8 86358450 86358450 1 + C A GBM 86358449 + 86358429 86358469 41 ACTACTGGACCTACCAGGGCTCATTCACCACGCCGCCCTGC ACTACTGGACCTACCAGGGCTAATTCACCACGCCGCCCTGC < 41bp 0.540345957869891 0.871570133072031 0.51467437 0.73801965 prediction 0.66244835040428 Functional Gain - CA3 ENSG00000164879 CDS Human protein_coding chr8:86358449 chr8:86358450 stopgain 0.999 1 22 hPsi_associated_SNPs_26595 0 0 0 0 2 chromatin 0.438720423050406 0.438718666406648 0.44669056 0 hPsi_site_20319 iPseU_CNN:0.44669056;iRNA_PseU:0 20320 chr10 12291708 12291708 1 + C A UCEC 12291707 + 12291687 12291727 41 CGCTCACAAGCTAATAGACTTCCTTAAGCTGGTAAAGTCTA CGCTCACAAGCTAATAGACTTACTTAAGCTGGTAAAGTCTA < 41bp 0.522150938199008 0.85337202371624 0.23683637 0.35812074 prediction 0.662442171034464 Functional Gain - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12291707 chr10:12291708 nonsynonymous SNV 0.814 1 22 hPsi_associated_SNPs_26596 0 0 1 0 1 Ribosome 0.438710407005188 0.440190711788308 0 0 hPsi_site_20320 iPseU_CNN:0;iRNA_PseU:0 20321 chr11 8940989 8940989 1 + G A rs139489790 8940988 + 8940968 8941008 41 AAGACTCATGTGGTAGCAGTTGATTCTGGACAAAGCGTGGA AAGACTCATGTGGTAGCAGTTAATTCTGGACAAAGCGTGGA < 41bp 0.54691996628775 0.878140694836486 0.3947093 0.7337597 prediction 0.662441457097471 Functional Gain - AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8940988 chr11:8940989 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26597 0 0 1 0 0 Ribosome 0.4387289925908 0.438720803898026 0.4675194 0 hPsi_site_20321 iPseU_CNN:0.4675194;iRNA_PseU:0 20322 chr3 48498676 48498676 1 + C A UCEC 48498675 + 48498655 48498695 41 CCAGTCCTAGGAAAAACCCTTCTGTGGTTATAAAGCCAGAA CCAGTCCTAGGAAAAACCCTTATGTGGTTATAAAGCCAGAA < 41bp 0.473750142066856 0.831213348805075 0.52956814 0.51634353 prediction 0.66242669761015 Functional Gain - ATRIP ENSG00000164053 CDS Human protein_coding chr3:48498675 chr3:48498676 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26598 0 0 1 0 1 chromatin 0.438718592927126 0.438718592922995 0 0 hPsi_site_20322 iPseU_CNN:0;iRNA_PseU:0 20323 chr6 34804068 34804068 1 + C A LUAD 34804067 + 34804047 34804087 41 GTGAAAGAGTCCTCCTACCATCTGCTCATCTCCCGCCTGGA GTGAAAGAGTCCTCCTACCATATGCTCATCTCCCGCCTGGA < 41bp 0.52997739265449 0.861186118607936 0.2888919 0.33915406 prediction 0.662417451906891 Functional Gain - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34804067 chr6:34804068 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26599 0 0 1 0 1 Ribosome 0.438662061728049 0.438719216284591 0 0 hPsi_site_20323 iPseU_CNN:0;iRNA_PseU:0 20324 chr1 54670833 54670833 1 + C A BLCA 54670832 + 54670812 54670852 41 TGTGATCTCTCACGCCCGTCTCTGGCAGACCACTGAGGAAA TGTGATCTCTCACGCCCGTCTATGGCAGACCACTGAGGAAA < 41bp 0.532742968889193 0.863948983786699 0.206851 0.2887174 prediction 0.662412029795011 Functional Gain - MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670832 chr1:54670833 synonymous SNV . 0 22 hPsi_associated_SNPs_26600 0 0 1 1 1 Ribosome 0.440705651484213 0.438718624118607 0 0 hPsi_site_20324 iPseU_CNN:0;iRNA_PseU:0 20325 chr11 49598178 49598178 1 + G A rs7101761 49598177 + 49598157 49598197 41 GGAAGAGGAAGAGGGCTTGGTGTGCTCTGTGGATGGCTCCT GGAAGAGGAAGAGGGCTTGGTATGCTCTGTGGATGGCTCCT < 41bp 0.461780602444787 0.831201941850008 0.32875407 0.5316789 prediction 0.662403883700016 Functional Gain - LOC440040 ENSG00000205035 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:49598177 chr11:49598178 . . 0 22 hPsi_associated_SNPs_26601 0 0 0 0 0 unknown 0.43871859311901 0.43871864540807 0.0633577999999999 0 hPsi_site_20325 iPseU_CNN:0.0633577999999999;iRNA_PseU:0 20326 chr6 43254597 43254597 1 + C A rs41275944 43254596 + 43254576 43254616 41 CTGGACAGGCCCCTGCAGCCTCTGTCCCCTGGCCTAGCCTC CTGGACAGGCCCCTGCAGCCTATGTCCCCTGGCCTAGCCTC < 41bp 0.501557747572624 0.832758700289536 0.23090345 0.24525097 prediction 0.662401905433825 Functional Gain - TTBK1 ENSG00000146216 UTR3 Human protein_coding chr6:43254596 chr6:43254597 . . 0 22 hPsi_associated_SNPs_26602 0 0 0 0 0 exosome 0.438718164344481 0.438722315225117 0 0 hPsi_site_20326 iPseU_CNN:0;iRNA_PseU:0 20327 chr3 152880615 152880615 1 + G A LUSC 152880614 + 152880594 152880634 41 GACTTTTACCGCAAGGAGATTGAGGTGGACTCGTCGCCGTC GACTTTTACCGCAAGGAGATTAAGGTGGACTCGTCGCCGTC < 41bp 0.445988343651439 0.831190371944347 0.6339636 0.83888793 prediction 0.662380743888694 Functional Gain - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880614 chr3:152880615 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26603 0 0 1 0 0 Ribosome 0.438718592994582 0.438718592995102 0.40984866 0 hPsi_site_20327 iPseU_CNN:0.40984866;iRNA_PseU:0 Pediatric autoimmune diseases 20328 chr16 69148807 69148807 1 + G A HNSC 69148806 + 69148786 69148826 41 GCCTGCTTCCTTCGGGGCAATGCAGAGATGATCTTCATGTC GCCTGCTTCCTTCGGGGCAATACAGAGATGATCTTCATGTC < 41bp 0.419238049166856 0.831186705044394 0.20594162 0.28853494 prediction 0.662373410088788 Functional Gain - HAS3 ENSG00000103044 CDS Human protein_coding chr16:69148806 chr16:69148807 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26604 0 0 0 0 0 nucleus 0.438730442031921 0.43870912594924 0 0 hPsi_site_20328 iPseU_CNN:0;iRNA_PseU:0 20329 chr2 220046433 220046433 1 + C A UCEC 220046432 + 220046412 220046452 41 GTCAGATGAGGAGGCTTCTATCTTGGAGAGTGGTGGCTTCT GTCAGATGAGGAGGCTTCTATATTGGAGAGTGGTGGCTTCT < 41bp 0.464746937264107 0.831185412333322 0.32767949 0.5193058 prediction 0.662370824666643 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220046432 chr2:220046433 synonymous SNV . 0 22 hPsi_associated_SNPs_26605 0 0 1 0 1 unknown 0.438718905620193 0.438859673860596 0.0386116000000001 0 hPsi_site_20329 iPseU_CNN:0.0386116000000001;iRNA_PseU:0 20330 chr3 57545645 57545645 1 + G A BLCA 57545644 + 57545624 57545664 41 GTGATTCCATTACCTAGTCATGAAGAAGTTACCACCCACCA GTGATTCCATTACCTAGTCATAAAGAAGTTACCACCCACCA < 41bp 0.439995148192846 0.831185249016649 0.22336054 0.4309086 prediction 0.662370498033297 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57545644 chr3:57545645 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_26606 0 0 1 1 0 Endoplasmic reticulum 0.438718644544016 0.438718592787344 0 0 hPsi_site_20330 iPseU_CNN:0;iRNA_PseU:0 20331 chr3 141535608 141535608 1 + C A rs33928105 141535607 + 141535587 141535627 41 TTCTTTAAAACGATCAACTTTCCTCGCCTGGAAGCTGGCCT TTCTTTAAAACGATCAACTTTACTCGCCTGGAAGCTGGCCT < 41bp 0.478609664200775 0.831183357681943 0.25506628 0.4481304 prediction 0.662366715363886 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141535607 chr3:141535608 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_26607 0 0 0 0 1 exosome 0.438718436706385 0.43882028180336 0 0 hPsi_site_20331 iPseU_CNN:0;iRNA_PseU:0 20332 chr15 91455353 91455353 1 + G A COAD 91455352 + 91455332 91455372 41 CCTGGATGGGCACCGCACGCTGCCCTCCTCTGTGCGCATCT CCTGGATGGGCACCGCACGCTACCCTCCTCTGTGCGCATCT < 41bp 0.56747408798768 0.898655121598043 0.58227545 0.8821889 prediction 0.662362067220725 Functional Gain - MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91455352 chr15:91455353 synonymous SNV . 0 22 hPsi_associated_SNPs_26608 0 0 1 0 0 Endoplasmic reticulum 0.438537801229493 0.438941346978537 0.5998269 0 hPsi_site_20332 iPseU_CNN:0.5998269;iRNA_PseU:0 20333 chr11 33612873 33612873 1 + C A UCEC 33612872 + 33612852 33612892 41 GTGACTCAGGAGACAGTGGTTCTCCCACTGCCCATTAGAGA GTGACTCAGGAGACAGTGGTTATCCCACTGCCCATTAGAGA < 41bp 0.473833379471762 0.831180146525607 0.3659693 0.4332879 prediction 0.662360293051214 Functional Gain - KIAA1549L ENSG00000110427 CDS Human protein_coding chr11:33612872 chr11:33612873 nonsynonymous SNV 0.778 4 22 hPsi_associated_SNPs_26609 0 0 0 0 2 exosome 0.438718585133991 0.438815147735031 0 0 hPsi_site_20333 iPseU_CNN:0;iRNA_PseU:0 20334 chr5 17276105 17276105 1 + C A rs188176058 17276104 + 17276084 17276124 41 CTCTCTCTATCTCCTCTCTCTCTCTCCTCTCCTATCTCTCC CTCTCTCTATCTCCTCTCTCTATCTCCTCTCCTATCTCTCC < 41bp 0.525193752344431 0.856369953978444 0.31270444 0.36943746 prediction 0.662352403268027 Functional Gain - BASP1 ENSG00000176788 UTR3 Human protein_coding chr5:17276104 chr5:17276105 . . 0 22 hPsi_associated_SNPs_26610 0 0 1 2 0 Nucleus 0.438452197109725 0.438719707184329 0 0 hPsi_site_20334 iPseU_CNN:0;iRNA_PseU:0 Heel bone mineral density 20335 chr1 165624721 165624721 1 + G A CESC 165624720 + 165624700 165624740 41 GTTAAAAGTGGCTTGGGCAGTGGACCCAAATGCTGCCATTA GTTAAAAGTGGCTTGGGCAGTAGACCCAAATGCTGCCATTA < 41bp 0.435084579989042 0.831174931619371 0.19180313 0.29833966 prediction 0.662349863238743 Functional Gain - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165624720 chr1:165624721 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_26611 0 0 1 0 0 Ribosome 0.438764288993901 0.439292850474584 0 0 hPsi_site_20335 iPseU_CNN:0;iRNA_PseU:0 20336 chr11 95546175 95546175 1 + G A BLCA 95546174 + 95546154 95546194 41 GATTCAGGCAGAAGAAAGTGTGAAAACCTTGTCTAGAGAAA GATTCAGGCAGAAGAAAGTGTAAAAACCTTGTCTAGAGAAA < 41bp 0.431700889233421 0.831172051534151 0.30653024 0.61381614 prediction 0.662344103068301 Functional Gain - CEP57 ENSG00000166037 CDS Human protein_coding chr11:95546174 chr11:95546175 synonymous SNV . 0 22 hPsi_associated_SNPs_26612 0 0 1 0 2 Nucleus 0.438674539543202 0.438704124778362 0.22763228 0 hPsi_site_20336 iPseU_CNN:0.22763228;iRNA_PseU:0 20337 chr11 862714 862714 1 + C A rs142273247 862713 + 862693 862733 41 CGTGGGCTGCCTGGGTGCCATCAAGGAGAACAAGTGCCTCC CGTGGGCTGCCTGGGTGCCATAAAGGAGAACAAGTGCCTCC < 41bp 0.469751819201922 0.831170756041176 0.3346364 0.42896432 prediction 0.662341512082352 Functional Gain - TSPAN4 ENSG00000214063 CDS Human protein_coding chr11:862713 chr11:862714 synonymous SNV . 0 22 hPsi_associated_SNPs_26613 0 0 0 0 1 Ribosome 0.438718587911391 0.438718558163531 0 0 hPsi_site_20337 iPseU_CNN:0;iRNA_PseU:0 20338 chr4 25334950 25334950 1 + C A rs77036618 25334949 + 25334929 25334969 41 ACCCAGTTAAGAAGGCCCAGTCAACTCCTTTATCCACTGGA ACCCAGTTAAGAAGGCCCAGTAAACTCCTTTATCCACTGGA < 41bp 0.524834919445082 0.856005448699121 0.2839922 0.4040058 prediction 0.662341058508078 Functional Gain - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25334949 chr4:25334950 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_26614 0 0 1 3 0 chromatin 0.438666055707159 0.438718471046609 0 0 hPsi_site_20338 iPseU_CNN:0;iRNA_PseU:0 Crohn's disease 20339 chr14 52781297 52781297 1 + G A LUAD 52781296 + 52781276 52781316 41 GCCTCCAATGACTCCCAGTCTGAGGACTGCGAGACGCGACA GCCTCCAATGACTCCCAGTCTAAGGACTGCGAGACGCGACA < 41bp 0.434059358150957 0.831170334210905 0.25101435 0.33480942 prediction 0.662340668421809 Functional Gain - PTGER2 ENSG00000125384 CDS Human protein_coding chr14:52781296 chr14:52781297 nonsynonymous SNV 0.733 1 22 hPsi_associated_SNPs_26615 0 0 0 0 0 exosome 0.438718603351781 0.438573729182908 0 0 hPsi_site_20339 iPseU_CNN:0;iRNA_PseU:0 20340 chr13 31495779 31495779 1 + G A CESC 31495778 + 31495758 31495798 41 GAAAATTTAAGCTTTGCATATGAATTCAAAGCTGATGCATT GAAAATTTAAGCTTTGCATATAAATTCAAAGCTGATGCATT < 41bp 0.558636353140933 0.889803959157582 0.31230417 0.43243733 prediction 0.662335212033299 Functional Gain - MEDAG ENSG00000102802 CDS Human protein_coding chr13:31495778 chr13:31495779 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_26616 0 0 0 0 1 exosome 0.43790286360918 0.438841220307677 0 0 hPsi_site_20340 iPseU_CNN:0;iRNA_PseU:0 20341 chrX 151821209 151821209 1 + C A LUAD 151821208 + 151821188 151821228 41 AAAGCCTGAGCGATCTCCCCTCCACCTCAGAGCAGGCCCGG AAAGCCTGAGCGATCTCCCCTACACCTCAGAGCAGGCCCGG < 41bp 0.52283940524843 0.854004916953059 0.17594427 0.32806998 prediction 0.662331023409259 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151821208 chrX:151821209 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_26617 0 0 0 0 0 chromatin 0.438718592949679 0.438718596445454 0 0 hPsi_site_20341 iPseU_CNN:0;iRNA_PseU:0 20342 chr19 58101430 58101430 1 + C A COAD 58101429 + 58101409 58101449 41 CACCTTCTGACCAGAATGTTTCTGTAGGAGTGTCACAGTCA CACCTTCTGACCAGAATGTTTATGTAGGAGTGTCACAGTCA < 41bp 0.482362389769487 0.831164365010381 0.4486693 0.59761107 prediction 0.662328730020762 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101429 chr19:58101430 nonsynonymous SNV 0.238 2 22 hPsi_associated_SNPs_26618 0 0 1 0 1 exosome 0.438689641046876 0.433066192351695 0.19522214 0 hPsi_site_20342 iPseU_CNN:0.19522214;iRNA_PseU:0 20343 chr22 39883874 39883874 1 + G A UCEC 39883873 + 39883853 39883893 41 GTGGGTGGAGTGCGTGTGCCTGCCCGGCTGGCACGGACCCA GTGGGTGGAGTGCGTGTGCCTACCCGGCTGGCACGGACCCA < 41bp 0.453202993114282 0.831158613007553 0.24819854 0.68007517 prediction 0.662317226015106 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883873 chr22:39883874 synonymous SNV . 0 22 hPsi_associated_SNPs_26619 0 0 0 0 0 Endoplasmic reticulum 0.438719245298903 0.438720778701962 0.36015034 0 hPsi_site_20343 iPseU_CNN:0.36015034;iRNA_PseU:0 20344 chr12 9089527 9089527 1 + C A UCEC 9089526 + 9089506 9089546 41 CCGCAGAGCAGTTTCGTGGCTCTAAGAGGTTCTGCTCCATG CCGCAGAGCAGTTTCGTGGCTATAAGAGGTTCTGCTCCATG < 41bp 0.465734678770379 0.831155978839558 0.64869183 0.78124607 prediction 0.662311957679116 Functional Gain - PHC1 ENSG00000111752 CDS Human protein_coding chr12:9089526 chr12:9089527 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_26620 0 0 0 0 1 Endoplasmic reticulum 0.438717362659189 0.438264323891498 0.26510848 0 hPsi_site_20344 iPseU_CNN:0.26510848;iRNA_PseU:0 20345 chr11 73625524 73625524 1 + G A STAD 73625523 + 73625503 73625543 41 GGGAAGATAAGAAACTTCAGTGCTTGGGACTACAGAGCAGG GGGAAGATAAGAAACTTCAGTACTTGGGACTACAGAGCAGG < 41bp 0.4247557048406 0.831153724951676 0.2530718 0.438847 prediction 0.662307449903351 Functional Gain - PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73625523 chr11:73625524 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_26621 0 0 1 0 1 Ribosome 0.438718603934803 0.438718593410202 0 0 hPsi_site_20345 iPseU_CNN:0;iRNA_PseU:0 20346 chr17 7158125 7158125 1 + G A LUAD 7158124 + 7158104 7158144 41 CATCAGGACTCTTGTCCTGGTGAGACCCCTCCTTCATTGTT CATCAGGACTCTTGTCCTGGTAAGACCCCTCCTTCATTGTT < 41bp 0.433191954237006 0.831152169141314 0.42513916 0.8478143 prediction 0.662304338282628 Functional Gain - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7158124 chr17:7158125 nonsynonymous SNV 0.057 0 22 hPsi_associated_SNPs_26622 0 0 1 0 0 Cytosol 0.438718436266416 0.438718588599662 0.6956286 0 hPsi_site_20346 iPseU_CNN:0.6956286;iRNA_PseU:0 20347 chr7 30795104 30795104 1 + C A LUSC 30795103 + 30795083 30795123 41 GCGGGTGCTCAAGTGCGATGTCCACCTGGGCAACCCGCTGG GCGGGTGCTCAAGTGCGATGTACACCTGGGCAACCCGCTGG < 41bp 0.516989748660385 0.848140768109485 0.29380178 0.6903411 prediction 0.6623020388982 Functional Gain - INMT ENSG00000241644 CDS Human protein_coding chr7:30795103 chr7:30795104 synonymous SNV . 0 22 hPsi_associated_SNPs_26623 0 0 0 0 1 Nucleus 0.438718595820703 0.438718410164014 0.3806822 0 hPsi_site_20347 iPseU_CNN:0.3806822;iRNA_PseU:0 20348 chr2 64778732 64778732 1 + G A SKCM 64778731 + 64778711 64778751 41 TCAGAAGTTAGCCCTTCTGGTGTAGGGTTTGTTGATTTCGA TCAGAAGTTAGCCCTTCTGGTATAGGGTTTGTTGATTTCGA < 41bp 0.452937843115214 0.831149117563462 0.2536537 0.35918388 prediction 0.662298235126923 Functional Gain - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64778731 chr2:64778732 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26624 0 0 1 0 0 Ribosome 0.438718592994995 0.438718592991769 0 0 hPsi_site_20348 iPseU_CNN:0;iRNA_PseU:0 20349 chr5 140590645 140590645 1 + C A BRCA 140590644 + 140590624 140590664 41 GAGGAGCAGGGCGGCCCCGGTCGGTCGCTGCTCGGTGCCTG GAGGAGCAGGGCGGCCCCGGTAGGTCGCTGCTCGGTGCCTG < 41bp 0.485157282096005 0.831145492877362 0.53706187 0.8037609 prediction 0.662290985754725 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140590644 chr5:140590645 synonymous SNV . 0 22 hPsi_associated_SNPs_26625 0 0 0 0 0 exosome 0.439343905601545 0.438715967110566 0.53339806 0 hPsi_site_20349 iPseU_CNN:0.53339806;iRNA_PseU:0 20350 chr21 46078010 46078010 1 + G A SKCM 46078009 + 46077989 46078029 41 GTCCTCCGTGTGCATGCCCGTGAGCTGCACGCGCATTGTGT GTCCTCCGTGTGCATGCCCGTAAGCTGCACGCGCATTGTGT < 41bp 0.45702023837836 0.831137352830067 0.18240818 0.3825785 prediction 0.662274705660134 Functional Gain - KRTAP12-3 ENSG00000205439 CDS Human protein_coding chr21:46078009 chr21:46078010 synonymous SNV . 0 22 hPsi_associated_SNPs_26626 0 0 0 0 0 exosome 0.446806439069951 0.438714377519815 0 0 hPsi_site_20350 iPseU_CNN:0;iRNA_PseU:0 20351 chr4 160273909 160273909 1 + C A STAD 160273908 + 160273888 160273928 41 ACAGTGAAATTTCTTCACGATCCAGTATTGTTAGCAATTCG ACAGTGAAATTTCTTCACGATACAGTATTGTTAGCAATTCG < 41bp 0.48455839006873 0.831135835309221 0.1839245 0.24628362 prediction 0.662271670618442 Functional Gain - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160273908 chr4:160273909 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26627 0 0 1 0 1 Cytosol 0.438726223911208 0.439831177085426 0 0 hPsi_site_20351 iPseU_CNN:0;iRNA_PseU:0 20352 chr3 141499482 141499482 1 + G A SKCM 141499481 + 141499461 141499501 41 TGGCCTGGACATGAGCCGGGTGATCTTTTACTCGGCCCAGA TGGCCTGGACATGAGCCGGGTAATCTTTTACTCGGCCCAGA < 41bp 0.410793329651998 0.831132955464209 0.18800622 0.3236804 prediction 0.662265910928418 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141499481 chr3:141499482 synonymous SNV . 0 22 hPsi_associated_SNPs_26628 0 0 1 0 0 exosome 0.438718590732062 0.438718592816413 0 0 hPsi_site_20352 iPseU_CNN:0;iRNA_PseU:0 20353 chr15 84868559 84868559 1 + C T UCEC 84868560 - 84868540 84868580 41 GGCAGTCTCTGGTACCTGTGTGCGTCAGGGATGCTCTGCAC GGCAGTCTCTGGTACCTGTGTACGTCAGGGATGCTCTGCAC < 41bp 0.556582865321644 0.887712555471193 0.24532044 0.8529802 prediction 0.662259380299097 Functional Gain - GOLGA2P7;LOC440300 ENSG00000225151 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:84868560 chr15:84868559 . . 0 22 hPsi_associated_SNPs_26629 0 0 0 0 0 unknown 0.4387194960507 0.438718886533401 0.7059604 0 hPsi_site_20353 iPseU_CNN:0.7059604;iRNA_PseU:0 20354 chrX 77369525 77369525 1 + C A GBM 77369524 + 77369504 77369544 41 TCTTCTCAGGGATGTTCTGTTCTTGAAGGACTGTGTAGGCC TCTTCTCAGGGATGTTCTGTTATTGAAGGACTGTGTAGGCC < 41bp 0.536069743342584 0.8671963456036 0.328705 0.5021705 prediction 0.662253204522033 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77369524 chrX:77369525 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26630 0 0 1 0 1 Ribosome 0.438718591978979 0.438718592994483 0.00434099999999993 0 hPsi_site_20354 iPseU_CNN:0.00434099999999993;iRNA_PseU:0 20355 chr14 105222662 105222662 1 + C A rs138103839 105222661 + 105222641 105222681 41 AACAGGGGAAGAATGGTCCTTCCAGCACTAGCCTCCAGGTA AACAGGGGAAGAATGGTCCTTACAGCACTAGCCTCCAGGTA < 41bp 0.512261054508085 0.843384468313292 0.5854023 0.8628827 prediction 0.662246827610415 Functional Gain - SIVA1 ENSG00000184990 intronic Human protein_coding chr14:105222661 chr14:105222662 . . 0 22 hPsi_associated_SNPs_26631 0 0 0 0 0 Cytosol 0.438718592994952 0.438876052835767 0.5549608 0 hPsi_site_20355 iPseU_CNN:0.5549608;iRNA_PseU:0 20356 chr7 143701371 143701371 1 + C A HNSC 143701370 + 143701350 143701390 41 TGTGAACAACAGCATCTCTTTCACACTCTGTATGATACAAC TGTGAACAACAGCATCTCTTTAACACTCTGTATGATACAAC < 41bp 0.499968154312384 0.831121113204792 0.2108902 0.26795906 prediction 0.662242226409583 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701370 chr7:143701371 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_26632 0 0 0 0 0 unknown 0.438716428985135 0.438718558615216 0 0 hPsi_site_20356 iPseU_CNN:0;iRNA_PseU:0 20357 chr11 55419106 55419106 1 + G A SKCM 55419105 + 55419085 55419125 41 TCCACCTGTGGCTCCCACATTGCCATGGTCGTTATCTTTTT TCCACCTGTGGCTCCCACATTACCATGGTCGTTATCTTTTT < 41bp 0.545608273310511 0.876725712107256 0.30756086 0.33129418 prediction 0.662234877593489 Functional Gain - OR4S2 ENSG00000174982 CDS Human protein_coding chr11:55419105 chr11:55419106 nonsynonymous SNV 0.180 0 22 hPsi_associated_SNPs_26633 0 0 0 0 0 unknown 0.438735989042862 0.43915910293019 0 0 hPsi_site_20357 iPseU_CNN:0;iRNA_PseU:0 20358 chr15 44059106 44059106 1 + C A UCEC 44059105 + 44059085 44059125 41 GTTTGTCATGCAGGAGGAGTTCTCGTGAGTTGCTAGTTGGG GTTTGTCATGCAGGAGGAGTTATCGTGAGTTGCTAGTTGGG < 41bp 0.474547940657673 0.831117258264891 0.28992635 0.4074244 prediction 0.662234516529781 Functional Gain - PDIA3 ENSG00000167004 CDS Human protein_coding chr15:44059105 chr15:44059106 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26634 0 0 1 0 1 Endoplasmic reticulum 0.439114387827607 0.438724170185934 0 0 hPsi_site_20358 iPseU_CNN:0;iRNA_PseU:0 20359 chr1 228033845 228033845 1 + C A UCEC 228033844 + 228033824 228033864 41 CTCAGCCAGCCCCTGCTCTCTCTCCAGCTCTGGGGCCCACT CTCAGCCAGCCCCTGCTCTCTATCCAGCTCTGGGGCCCACT < 41bp 0.510885876548499 0.842000891469105 0.34285468 0.485804 prediction 0.662230029841212 Functional Gain - PRSS38 ENSG00000185888 CDS Human protein_coding chr1:228033844 chr1:228033845 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_26635 0 0 0 0 0 unknown 0.438718623354155 0.4387185941819 0 0 hPsi_site_20359 iPseU_CNN:0;iRNA_PseU:0 20360 chr6 117249977 117249977 1 + G A SKCM 117249976 + 117249956 117249996 41 TCACAGGCTCGGATCAATGGTGAATCAGCACGTTTCTGTCA TCACAGGCTCGGATCAATGGTAAATCAGCACGTTTCTGTCA < 41bp 0.420855979226274 0.831113588715882 0.2147167 0.32615888 prediction 0.662227177431764 Functional Gain - RFX6 ENSG00000185002 CDS Human protein_coding chr6:117249976 chr6:117249977 synonymous SNV . 0 22 hPsi_associated_SNPs_26636 0 0 0 0 1 membrane 0.438717704293338 0.438312822322512 0 0 hPsi_site_20360 iPseU_CNN:0;iRNA_PseU:0 20361 chr16 50745091 50745091 1 + G A rs77966199 50745090 + 50745070 50745110 41 GAAGAATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTG GAAGAATGCCCGCAAGGTGGTAACCAGCCGTCCGGCCGCTG < 41bp 0.412421830430121 0.831106249575053 0.29056263 0.79968905 prediction 0.662212499150105 Functional Gain - NOD2 ENSG00000167207 CDS Human protein_coding chr16:50745090 chr16:50745091 synonymous SNV . 0 22 hPsi_associated_SNPs_26637 0 0 0 0 0 exosome 0.438718592995019 0.438718579974408 0.5993781 0 hPsi_site_20361 iPseU_CNN:0.5993781;iRNA_PseU:0 20362 chr6 158490632 158490632 1 + C A UCEC 158490631 + 158490611 158490651 41 TCACGCTCTCATAGATACATTCTGTTGACTTCGGCACAGCT TCACGCTCTCATAGATACATTATGTTGACTTCGGCACAGCT < 41bp 0.463211716009133 0.831100793138164 0.24418354 0.3097099 prediction 0.662201586276328 Functional Gain - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158490631 chr6:158490632 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26638 0 0 0 0 2 Cytosol 0.438675489782761 0.436910100882418 0 0 hPsi_site_20362 iPseU_CNN:0;iRNA_PseU:0 20363 chr2 10136044 10136044 1 + G A BLCA 10136043 + 10136023 10136063 41 GGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTC GGGCCGTACGGCACAGAAGATAACTTTGCTGTCCCTCCTTC < 41bp 0.408551818284704 0.831099118276335 0.3280493 0.6420929 prediction 0.662198236552669 Functional Gain - GRHL1 ENSG00000134317 CDS Human protein_coding chr2:10136043 chr2:10136044 nonsynonymous SNV 0.866 2 22 hPsi_associated_SNPs_26639 0 0 0 0 2 Cytosol 0.438718690840667 0.43871859173456 0.2841858 0 hPsi_site_20363 iPseU_CNN:0.2841858;iRNA_PseU:0 20364 chr2 68615533 68615533 1 + C A UCEC 68615532 + 68615512 68615552 41 CCAACAGCCAGACAGTGGGTTCTTCTGTGAAGAGAATTCCA CCAACAGCCAGACAGTGGGTTATTCTGTGAAGAGAATTCCA < 41bp 0.52572263503784 0.856821211742601 0.29407358 0.44617245 prediction 0.662197153409523 Functional Gain - PLEK ENSG00000115956 CDS Human protein_coding chr2:68615532 chr2:68615533 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26640 0 0 0 0 2 exosome 0.438907232047331 0.438589309322187 0 0 hPsi_site_20364 iPseU_CNN:0;iRNA_PseU:0 20365 chr19 2339895 2339895 1 + G A OV 2339894 + 2339874 2339914 41 GGCGGTGGACGTGACGCCGGTGATGACCTGCGTGTTTGTGG GGCGGTGGACGTGACGCCGGTAATGACCTGCGTGTTTGTGG < 41bp 0.432206692391545 0.831097049515362 0.43713027 0.7574569 prediction 0.662194099030724 Functional Gain - SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2339894 chr19:2339895 . . 0 22 hPsi_associated_SNPs_26641 0 0 1 0 3 Endoplasmic reticulum 0.440719924151909 0.43857134027068 0.5149138 0 hPsi_site_20365 iPseU_CNN:0.5149138;iRNA_PseU:0 20366 chr17 45914246 45914246 1 + G A SKCM 45914245 + 45914225 45914265 41 CCTGCCCCTGCTACCTGGGGTGCCCATGGCTGGGGACAGCA CCTGCCCCTGCTACCTGGGGTACCCATGGCTGGGGACAGCA < 41bp 0.56207466517029 0.893170122168653 0.14508724 0.23736057 prediction 0.662190913996725 Functional Gain - LRRC46 ENSG00000141294 CDS Human protein_coding chr17:45914245 chr17:45914246 synonymous SNV . 0 22 hPsi_associated_SNPs_26642 0 0 0 0 0 exosome 0.438991355129143 0.438925732277814 0 0 hPsi_site_20366 iPseU_CNN:0;iRNA_PseU:0 20367 chr10 5799555 5799555 1 + C A UCEC 5799554 + 5799534 5799574 41 GTAGACAGCCCTGGAGATGTTCTTGATCACACCTACCAAGA GTAGACAGCCCTGGAGATGTTATTGATCACACCTACCAAGA < 41bp 0.470295635801857 0.831093821865255 0.29087985 0.5680659 prediction 0.662187643730511 Functional Gain - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5799554 chr10:5799555 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_26643 0 0 1 0 2 Nucleus 0.438718592939128 0.438718592995095 0.1361318 0 hPsi_site_20367 iPseU_CNN:0.1361318;iRNA_PseU:0 20368 chr2 190531072 190531072 1 + G A UCEC 190531071 + 190531051 190531091 41 GTGGAAGATGAAAGAGGCAATGTGTTTCTATGGAATGGAGA GTGGAAGATGAAAGAGGCAATATGTTTCTATGGAATGGAGA < 41bp 0.436368270884556 0.831087274714727 0.21180117 0.23578334 prediction 0.662174549429454 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531071 chr2:190531072 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26644 0 0 1 0 0 chromatin 0.438730086699062 0.438719048765748 0 0 hPsi_site_20368 iPseU_CNN:0;iRNA_PseU:0 20369 chr1 47611785 47611785 1 + C A ACC 47611784 + 47611764 47611804 41 CGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCT CGTTTTGCACCGGGTTCTGCTAAACACAGCCACGCTTTCCT < 41bp 0.489566982288564 0.831084276564316 0.20523593 0.30930334 prediction 0.662168553128631 Functional Gain - CYP4A22 ENSG00000162365 CDS Human protein_coding chr1:47611784 chr1:47611785 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_26645 0 0 0 0 2 exosome 0.438722201014193 0.438718600466884 0 0 hPsi_site_20369 iPseU_CNN:0;iRNA_PseU:0 20370 chr17 21207742 21207742 1 + G A BLCA 21207741 + 21207721 21207761 41 ATGTCCCTCCCTGGCAGATGTGAAGCCCTCCAATGTCCTTA ATGTCCCTCCCTGGCAGATGTAAAGCCCTCCAATGTCCTTA < 41bp 0.409239628161365 0.831082808838235 0.36641526 0.500436 prediction 0.662165617676471 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21207741 chr17:21207742 synonymous SNV . 0 22 hPsi_associated_SNPs_26646 0 0 1 0 1 Ribosome 0.438718592995142 0.438718592819221 0.000871999999999984 0 hPsi_site_20370 iPseU_CNN:0.000871999999999984;iRNA_PseU:0 20371 chr12 81110921 81110921 1 + G A HNSC 81110920 + 81110900 81110940 41 TGCATACCGTCCCCCGAGGGTGAATTTGGGGACGAGTTTGT TGCATACCGTCCCCCGAGGGTAAATTTGGGGACGAGTTTGT < 41bp 0.554429280919418 0.885511998986886 0.22756669 0.31964165 prediction 0.662165436134936 Functional Gain - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81110920 chr12:81110921 nonsynonymous SNV 0.650 0 22 hPsi_associated_SNPs_26647 0 0 0 0 0 unknown 0.43871874745829 0.43871859299507 0 0 hPsi_site_20371 iPseU_CNN:0;iRNA_PseU:0 20372 chr16 49407936 49407936 1 + C A BLCA 49407935 + 49407915 49407955 41 CTGCTGAAGATAGGCGCATGTCTGACCTCACCTGTGTGCTG CTGCTGAAGATAGGCGCATGTATGACCTCACCTGTGTGCTG < 41bp 0.52379041874483 0.854872479219955 0.18715909 0.54121256 prediction 0.662164120950249 Functional Gain - C16orf78 ENSG00000166152 CDS Human protein_coding chr16:49407935 chr16:49407936 nonsynonymous SNV 0.777 4 22 hPsi_associated_SNPs_26648 0 0 0 0 1 exosome 0.438687778273229 0.441688214556617 0.0824251199999999 0 hPsi_site_20372 iPseU_CNN:0.0824251199999999;iRNA_PseU:0 20373 chr19 16302232 16302232 1 + G A rs540790763 16302231 + 16302211 16302251 41 TTCCTCTAGCTTTGGGCCTATGCTGTCCCCTGCAGGCCCTA TTCCTCTAGCTTTGGGCCTATACTGTCCCCTGCAGGCCCTA < 41bp 0.543733184499479 0.874810188066338 0.33159995 0.7301793 prediction 0.662154007133719 Functional Gain - FAM32A ENSG00000105058 UTR3 Human protein_coding chr19:16302231 chr19:16302232 . . 0 22 hPsi_associated_SNPs_26649 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995102 0.4603586 0 hPsi_site_20373 iPseU_CNN:0.4603586;iRNA_PseU:0 20374 chr16 2818127 2818127 1 + C A HNSC 2818126 + 2818106 2818146 41 CAGCAAAGGAGCGGCGGAGTTCCTCCTCGTCGTCGTCGTCC CAGCAAAGGAGCGGCGGAGTTACTCCTCGTCGTCGTCGTCC < 41bp 0.486574693138261 0.831069024332802 0.20210639 0.82006085 prediction 0.662138048665604 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818126 chr16:2818127 nonsynonymous SNV 0.338 3 22 hPsi_associated_SNPs_26650 0 0 1 0 0 Nucleus 0.43871861116198 0.438718804964604 0.6401217 0 hPsi_site_20374 iPseU_CNN:0.6401217;iRNA_PseU:0 20375 chr17 74465259 74465259 1 + C A UCEC 74465258 + 74465238 74465278 41 TGAGCCTCCTGCCACAGCCTTCATCTCCGTCTTGGGCGTCT TGAGCCTCCTGCCACAGCCTTAATCTCCGTCTTGGGCGTCT < 41bp 0.533814586600814 0.864878184625802 0.35197842 0.7059336 prediction 0.662127196049976 Functional Gain - AANAT ENSG00000129673 CDS Human protein_coding chr17:74465258 chr17:74465259 stopgain 0.947 4 22 hPsi_associated_SNPs_26651 0 0 0 2 2 exosome 0.438694464636843 0.43868427581377 0.4118672 0 hPsi_site_20375 iPseU_CNN:0.4118672;iRNA_PseU:0 20376 chr7 94053705 94053705 1 + C A COAD 94053704 + 94053684 94053724 41 GGTGCTCCTGGTATTCTGGGTCTCCCTGGCTCGAGAGGTGA GGTGCTCCTGGTATTCTGGGTATCCCTGGCTCGAGAGGTGA < 41bp 0.471173510354718 0.831056238726961 0.23292843 0.41311675 prediction 0.662112477453922 Functional Gain - COL1A2 ENSG00000164692 CDS Human protein_coding chr7:94053704 chr7:94053705 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_26652 0 0 0 0 1 Endoplasmic reticulum 0.43871828047176 0.438719253304927 0 0 hPsi_site_20376 iPseU_CNN:0;iRNA_PseU:0 20377 chr1 154987239 154987239 1 + G A HNSC 154987238 + 154987218 154987258 41 CGCCAGCTGGGCCACCTATGTGACCTCACCATCCGGACGCA CGCCAGCTGGGCCACCTATGTAACCTCACCATCCGGACGCA < 41bp 0.57019613007918 0.901251138966106 0.33811885 0.67760193 prediction 0.662110017773852 Functional Gain - ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154987238 chr1:154987239 nonsynonymous SNV 0.989 5 22 hPsi_associated_SNPs_26653 0 0 1 0 0 chromatin 0.438718572513596 0.438718817273208 0.35520386 0 hPsi_site_20377 iPseU_CNN:0.35520386;iRNA_PseU:0 20378 chr2 218954043 218954043 1 + G A LUAD 218954042 + 218954022 218954062 41 CTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGA CTCCCGAGTGCTGTGTGGCCTATAGCAAGATCTTTGGCCGA < 41bp 0.570659910184492 0.901712255583464 0.2906494 0.35110313 prediction 0.662104690797944 Functional Gain - RUFY4 ENSG00000188282 CDS Human protein_coding chr2:218954042 chr2:218954043 nonsynonymous SNV 0.132 4 22 hPsi_associated_SNPs_26654 0 0 0 0 2 exosome 0.438720196184248 0.438715031865838 0 0 hPsi_site_20378 iPseU_CNN:0;iRNA_PseU:0 20379 chr1 27105570 27105570 1 + C A UCEC 27105569 + 27105549 27105589 41 CCGACGATGCCTGATTGAGATCTTTGGCATTTTAAAGGAGT CCGACGATGCCTGATTGAGATATTTGGCATTTTAAAGGAGT < 41bp 0.492858507656365 0.831048410531809 0.4442396 0.43820196 prediction 0.662096821063618 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27105569 chr1:27105570 synonymous SNV . 0 22 hPsi_associated_SNPs_26655 0 0 1 0 1 Nucleus 0.438718591350273 0.43871862718162 0 0 hPsi_site_20379 iPseU_CNN:0;iRNA_PseU:0 20380 chr17 40958768 40958768 1 + G A UCEC 40958767 + 40958747 40958787 41 GCTCGACCTGGTCTATCTTCTGCATGAACCCATATATGAGA GCTCGACCTGGTCTATCTTCTACATGAACCCATATATGAGA < 41bp 0.421409867820207 0.831042313452217 0.20989254 0.34437925 prediction 0.662084626904435 Functional Gain - CNTD1 ENSG00000176563 CDS Human protein_coding chr17:40958767 chr17:40958768 synonymous SNV . 0 22 hPsi_associated_SNPs_26656 0 0 0 0 1 Cytosol 0.41521562212736 0.339540911092407 0 0 hPsi_site_20380 iPseU_CNN:0;iRNA_PseU:0 20381 chr19 39760175 39760175 1 + G A SKCM 39760174 + 39760154 39760194 41 GGCTGAGCTGGCCCTGACGCTGAAGGTTCTGGAGGCCACCG GGCTGAGCTGGCCCTGACGCTAAAGGTTCTGGAGGCCACCG < 41bp 0.415586213344977 0.831041036875 0.29460552 0.5064687 prediction 0.66208207375 Functional Gain - IFNL2 ENSG00000183709 CDS Human protein_coding chr19:39760174 chr19:39760175 synonymous SNV . 0 22 hPsi_associated_SNPs_26657 0 0 0 0 1 exosome 0.438739174386125 0.438668499026366 0.0129374 0 hPsi_site_20381 iPseU_CNN:0.0129374;iRNA_PseU:0 20382 chr12 81112190 81112190 1 + C A HNSC 81112189 + 81112169 81112209 41 GAGCAGTACTTTTGACAGCATCTACTGTCCTGATGTATCAA GAGCAGTACTTTTGACAGCATATACTGTCCTGATGTATCAA < 41bp 0.485371424811579 0.831040464599013 0.22834212 0.23425272 prediction 0.662080929198026 Functional Gain - MYF5 ENSG00000111049 CDS Human protein_coding chr12:81112189 chr12:81112190 synonymous SNV . 0 22 hPsi_associated_SNPs_26658 0 0 0 0 2 unknown 0.438718792650296 0.436848927426949 0 0 hPsi_site_20382 iPseU_CNN:0;iRNA_PseU:0 20383 chr15 64446187 64446187 1 + G A STAD 64446186 + 64446166 64446206 41 TCCATGTGGATCCCTATGTTTGCAACCCCTCCCCAGGTGAG TCCATGTGGATCCCTATGTTTACAACCCCTCCCCAGGTGAG < 41bp 0.57317973629008 0.904216575389988 0.4021202 0.7682484 prediction 0.662073678199816 Functional Gain - SNX22 ENSG00000157734 CDS Human protein_coding chr15:64446186 chr15:64446187 nonsynonymous SNV 0.301 0 22 hPsi_associated_SNPs_26659 0 0 0 2 2 Endoplasmic reticulum 0.438718593353339 0.438718140691868 0.5364968 0 hPsi_site_20383 iPseU_CNN:0.5364968;iRNA_PseU:0 20384 chr6 10697569 10697569 1 + G A LGG 10697568 + 10697548 10697588 41 CTTCAGCAGCAATGGACTCTTGTGGCTGACTTCACTCACCA CTTCAGCAGCAATGGACTCTTATGGCTGACTTCACTCACCA < 41bp 0.557882770821549 0.888918214955198 0.57096505 0.71577024 prediction 0.662070888267297 Functional Gain - PAK1IP1 ENSG00000111845 CDS Human protein_coding chr6:10697568 chr6:10697569 nonsynonymous SNV 0.948 0 22 hPsi_associated_SNPs_26660 0 0 1 0 1 Ribosome 0.439340896973865 0.442507817765786 0.28961038 0 hPsi_site_20384 iPseU_CNN:0.28961038;iRNA_PseU:0 20385 chr3 15686411 15686411 1 + G A LUSC 15686410 + 15686390 15686430 41 GGTCTCATTGGTGCAGAGAATGCAACAGGTGAAACGGACCC GGTCTCATTGGTGCAGAGAATACAACAGGTGAAACGGACCC < 41bp 0.433771836616403 0.831034032737905 0.3928183 0.6512798 prediction 0.662068065475811 Functional Gain - BTD ENSG00000169814 CDS Human protein_coding chr3:15686410 chr3:15686411 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_26661 0 0 0 0 0 Ribosome 0.438718441641952 0.438206354270672 0.3025596 0 hPsi_site_20385 iPseU_CNN:0.3025596;iRNA_PseU:0 20386 chr11 55872747 55872747 1 + G A LUSC 55872746 + 55872726 55872766 41 ATTGACCTCAGTTACTCAACTGTCGTCACACCTAAAACCTT ATTGACCTCAGTTACTCAACTATCGTCACACCTAAAACCTT < 41bp 0.46106309620346 0.831030871276828 0.3184694 0.67096376 prediction 0.662061742553656 Functional Gain - OR8H2 ENSG00000181767 CDS Human protein_coding chr11:55872746 chr11:55872747 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_26662 0 0 0 0 0 unknown 0.439049017832191 0.43663869013399 0.34192752 0 hPsi_site_20386 iPseU_CNN:0.34192752;iRNA_PseU:0 20387 chr19 18260970 18260970 1 + G A rs141725155 18260969 + 18260949 18260989 41 ACTATGCCCAGCTAATTTTTTGTATTTTTAGTACAGACGGG ACTATGCCCAGCTAATTTTTTATATTTTTAGTACAGACGGG < 41bp 0.452156428931704 0.831022306031169 0.20696023 0.23418963 prediction 0.662044612062338 Functional Gain - MAST3 ENSG00000269145 ncRNA_intronic Human antisense chr19:18260969 chr19:18260970 . . 0 22 hPsi_associated_SNPs_26663 0 0 0 0 0 Cytosol 0.438735384401815 0.438719896277791 0 0 hPsi_site_20387 iPseU_CNN:0;iRNA_PseU:0 20388 chr17 18872442 18872442 1 + C A PAAD 18872441 + 18872421 18872461 41 CCTCTCCACCATCCTCACGCTCGGCATCACAGCCCTGTACA CCTCTCCACCATCCTCACGCTAGGCATCACAGCCCTGTACA < 41bp 0.461788385995864 0.831021897943812 0.17727873 0.30300313 prediction 0.662043795887624 Functional Gain - SLC5A10 ENSG00000154025 CDS Human protein_coding chr17:18872441 chr17:18872442 synonymous SNV . 0 22 hPsi_associated_SNPs_26664 0 0 0 0 2 chromatin 0.438718859084686 0.438728500560014 0 0 hPsi_site_20388 iPseU_CNN:0;iRNA_PseU:0 20389 chr19 49661469 49661469 1 + C A STAD 49661468 + 49661448 49661488 41 GAGCTGGATCCCCAAGATCTTCAAGAAGAAGACCTGCACGA GAGCTGGATCCCCAAGATCTTAAAGAAGAAGACCTGCACGA < 41bp 0.474309403620998 0.831011635882617 0.3185682 0.5726485 prediction 0.662023271765234 Functional Gain - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49661468 chr19:49661469 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26665 0 0 1 0 2 chromatin 0.438720983712881 0.438720789069089 0.145297 0 hPsi_site_20389 iPseU_CNN:0.145297;iRNA_PseU:0 20390 chr11 2591910 2591910 1 + C A LUSC 2591909 + 2591889 2591929 41 AGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAG AGTACGTGGTCCGCCTCTGGTACGCCGGCTGCCGCAGCAAG < 41bp 0.510800502743444 0.841802691260669 0.33121338 0.7569803 prediction 0.662004377034451 Functional Gain - KCNQ1 ENSG00000053918 CDS Human protein_coding chr11:2591909 chr11:2591910 nonsynonymous SNV 0.902 5 22 hPsi_associated_SNPs_26666 0 0 0 0 2 Nucleus 0.43871859299541 0.43871783934963 0.5139606 0 hPsi_site_20390 iPseU_CNN:0.5139606;iRNA_PseU:0 20391 chr13 49281445 49281445 1 + C A HNSC 49281444 + 49281424 49281464 41 CCTCTGTGGGATCATATGGATCCTTATCATGGCTTCCTCAA CCTCTGTGGGATCATATGGATACTTATCATGGCTTCCTCAA < 41bp 0.5158663713761 0.846867894127578 0.25939116 0.5560704 prediction 0.662003045502956 Functional Gain - CYSLTR2 ENSG00000152207 CDS Human protein_coding chr13:49281444 chr13:49281445 synonymous SNV . 0 22 hPsi_associated_SNPs_26667 0 0 0 0 0 exosome 0.438718596280529 0.438718520388077 0.1121408 0 hPsi_site_20391 iPseU_CNN:0.1121408;iRNA_PseU:0 20392 chr1 35223153 35223153 1 + G A UCEC 35223152 + 35223132 35223172 41 GTTCTTCCCTGTGTCCCATGTGCGCCTCTGGGCCCTGCAGC GTTCTTCCCTGTGTCCCATGTACGCCTCTGGGCCCTGCAGC < 41bp 0.567834570722822 0.89882686393999 0.30654597 0.75752604 prediction 0.661984586434335 Functional Gain - GJB5 ENSG00000189280 CDS Human protein_coding chr1:35223152 chr1:35223153 synonymous SNV . 0 22 hPsi_associated_SNPs_26668 0 0 0 0 0 Ribosome 0.438716036831278 0.438714912388526 0.51505208 0 hPsi_site_20392 iPseU_CNN:0.51505208;iRNA_PseU:0 20393 chr8 59358539 59358539 1 + C A UCEC 59358538 + 59358518 59358558 41 TCAATACTTAATGCAGTTGTTCTTATTGATGATTCAGTGCC TCAATACTTAATGCAGTTGTTATTATTGATGATTCAGTGCC < 41bp 0.50598558144647 0.836970556886796 0.28093192 0.32543892 prediction 0.661969950880654 Functional Gain - UBXN2B ENSG00000215114 CDS Human protein_coding chr8:59358538 chr8:59358539 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26669 0 0 1 0 2 Cytosol 0.43867729690417 0.438718512225763 0 0 hPsi_site_20393 iPseU_CNN:0;iRNA_PseU:0 20394 chr3 148868415 148868415 1 + G A UCEC 148868414 + 148868394 148868434 41 TGCAGTGTTTCACTGTGCGGTGCAGTGCGGCGGCAGCTCGT TGCAGTGTTTCACTGTGCGGTACAGTGCGGCGGCAGCTCGT < 41bp 0.409155545596247 0.830976420989397 0.4526371 0.74643594 prediction 0.661952841978794 Functional Gain - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148868414 chr3:148868415 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_26670 0 0 1 0 2 Ribosome 0.440082274656028 0.438448854027511 0.49287188 0 hPsi_site_20394 iPseU_CNN:0.49287188;iRNA_PseU:0 20395 chr9 139879436 139879436 1 + C A UCEC 139879435 + 139879415 139879455 41 TCCCTGCCCCTCTCTCCCTCTCTTCGCCCCTCCAGCCCCTT TCCCTGCCCCTCTCTCCCTCTATTCGCCCCTCCAGCCCCTT < 41bp 0.50498459860456 0.835956585261795 0.31182724 0.69026184 prediction 0.66194397331447 Functional Gain - LCNL1 ENSG00000214402 CDS Human protein_coding chr9:139879435 chr9:139879436 synonymous SNV . 0 22 hPsi_associated_SNPs_26671 0 0 0 0 0 exosome 0.438718606901513 0.438717512956474 0.38052368 0 hPsi_site_20395 iPseU_CNN:0.38052368;iRNA_PseU:0 20396 chr11 45245806 45245806 1 + C A UCEC 45245805 + 45245785 45245825 41 AGGGAGAAGTCTGAGCAGGTTCTGGATAACCCAGAAGACCT AGGGAGAAGTCTGAGCAGGTTATGGATAACCCAGAAGACCT < 41bp 0.529107637394956 0.86007837114204 0.30263677 0.40363583 prediction 0.661941467494168 Functional Gain - PRDM11 ENSG00000019485 CDS Human protein_coding chr11:45245805 chr11:45245806 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26672 0 0 0 0 1 cytosol 0.438718578828935 0.438718596957436 0 0 hPsi_site_20396 iPseU_CNN:0;iRNA_PseU:0 20397 chr20 62563116 62563116 1 + G A rs180676568 62563115 + 62563095 62563135 41 GCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTGTTT GCATGCAGTATTTAAAGCAGTATAGCTACGGTCTTCTGTTT < 41bp 0.451587096289076 0.830970543171631 0.2809832 0.69229263 prediction 0.661941086343261 Functional Gain - DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62563115 chr20:62563116 . . 0 22 hPsi_associated_SNPs_26673 1 0 1 0 0 Ribosome 0.437066413804122 0.438633593066736 0.38458526 0 hPsi_site_20397 iPseU_CNN:0.38458526;iRNA_PseU:0 20398 chr12 64456873 64456873 1 + C A UCEC 64456872 + 64456852 64456892 41 GGAGATGTACCCTGCTGCGTTCTGTCCACCAATGAAGTTTG GGAGATGTACCCTGCTGCGTTATGTCCACCAATGAAGTTTG < 41bp 0.524062507989728 0.855022816809303 0.26878545 0.33464202 prediction 0.661920617639151 Functional Gain - SRGAP1 ENSG00000196935 CDS Human protein_coding chr12:64456872 chr12:64456873 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_26674 0 0 0 0 1 Nucleus 0.438883307799375 0.438679260166072 0 0 hPsi_site_20398 iPseU_CNN:0;iRNA_PseU:0 20399 chr2 26671625 26671625 1 + C A UCEC 26671624 + 26671604 26671644 41 TGGATTTGCCGAAGCAAATTTCTGAAAAAACTACCAAGAGG TGGATTTGCCGAAGCAAATTTATGAAAAAACTACCAAGAGG < 41bp 0.460173080886434 0.830956483413002 0.25964954 0.3656072 prediction 0.661912966826004 Functional Gain - DRC1 ENSG00000157856 CDS Human protein_coding chr2:26671624 chr2:26671625 nonsynonymous SNV 0.173 3 22 hPsi_associated_SNPs_26675 0 0 0 0 2 exosome 0.43871726118212 0.438690673236114 0 0 hPsi_site_20399 iPseU_CNN:0;iRNA_PseU:0 20400 chr15 41224557 41224557 1 + C A rs76686366 41224556 + 41224536 41224576 41 CCGGCTGTGTAACGAATGCATCCCCCACAATGGCTGTCGCC CCGGCTGTGTAACGAATGCATACCCCACAATGGCTGTCGCC < 41bp 0.533428136174711 0.86438211758056 0.26094276 0.7012476 prediction 0.661907962811699 Functional Gain - DLL4 ENSG00000128917 CDS Human protein_coding chr15:41224556 chr15:41224557 synonymous SNV . 0 22 hPsi_associated_SNPs_26676 0 0 0 0 2 Endoplasmic reticulum 0.438718573899267 0.438920510061425 0.4024952 0 hPsi_site_20400 iPseU_CNN:0.4024952;iRNA_PseU:0 20401 chr19 51919179 51919179 1 + G A LUSC 51919178 + 51919158 51919198 41 CAGAGAGGTCCAGGGCTCGCTGCTGGGAGCCAAGCCTGTTC CAGAGAGGTCCAGGGCTCGCTACTGGGAGCCAAGCCTGTTC < 41bp 0.546055205074573 0.877008588731002 0.25399542 0.72124076 prediction 0.661906767312859 Functional Gain - SIGLEC10 ENSG00000142512 CDS Human protein_coding chr19:51919178 chr19:51919179 stopgain 0.173 0 22 hPsi_associated_SNPs_26677 0 0 0 0 0 exosome 0.438754172469645 0.438731332083776 0.44248152 0 hPsi_site_20401 iPseU_CNN:0.44248152;iRNA_PseU:0 20402 chr11 61404962 61404962 1 + G A LUSC 61404961 + 61404941 61404981 41 AAGGTCAAGGCCTTCTTGGCTGATCCATCTGCCTTTGTGGC AAGGTCAAGGCCTTCTTGGCTAATCCATCTGCCTTTGTGGC < 41bp 0.423688172112922 0.830951376114187 0.29349324 0.38091022 prediction 0.661902752228374 Functional Gain - RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404961 chr11:61404962 . . 0 22 hPsi_associated_SNPs_26678 0 0 1 0 0 unknown 0.438718681850822 0.438721155142327 0 0 hPsi_site_20402 iPseU_CNN:0;iRNA_PseU:0 20403 chr17 8249090 8249090 1 + C A CESC 8249089 + 8249069 8249109 41 TTCGGCTCAGTAGAAGAATCTCCAAGGGCACAGACGATCAC TTCGGCTCAGTAGAAGAATCTACAAGGGCACAGACGATCAC < 41bp 0.514415137777773 0.845359829264972 0.5448308 0.62941337 prediction 0.661889382974399 Functional Gain - ODF4 ENSG00000184650 CDS Human protein_coding chr17:8249089 chr17:8249090 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_26679 0 0 0 0 0 unknown 0.438718597863909 0.438699270533486 0.16916514 0 hPsi_site_20403 iPseU_CNN:0.16916514;iRNA_PseU:0 20404 chr8 75756265 75756265 1 + G A LUAD 75756264 + 75756244 75756284 41 CAGAGGCTTGGGCGGCTACTTGCATTTGGGACCATGGACCT CAGAGGCTTGGGCGGCTACTTACATTTGGGACCATGGACCT < 41bp 0.55944646519843 0.890387042893721 0.2825298 0.69098246 prediction 0.661881155390583 Functional Gain - PI15 ENSG00000137558 CDS Human protein_coding chr8:75756264 chr8:75756265 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26680 0 0 1 0 2 exosome 0.438718687088285 0.438718674693971 0.38196492 0 hPsi_site_20404 iPseU_CNN:0.38196492;iRNA_PseU:0 20405 chr13 31495937 31495937 1 + C A LUSC 31495936 + 31495916 31495956 41 AAAAATGAGTGAGCCTTTAATCCGAAGGAGCAGTTTCTCTG AAAAATGAGTGAGCCTTTAATACGAAGGAGCAGTTTCTCTG < 41bp 0.519791997381349 0.850725460257112 0.38855693 0.5826452 prediction 0.661866925751528 Functional Gain - MEDAG ENSG00000102802 CDS Human protein_coding chr13:31495936 chr13:31495937 synonymous SNV . 0 22 hPsi_associated_SNPs_26681 0 0 0 0 1 exosome 0.438718592995098 0.438710644465268 0.1652904 0 hPsi_site_20405 iPseU_CNN:0.1652904;iRNA_PseU:0 20406 chr22 22988918 22988918 1 + G A rs143241298 22988917 + 22988897 22988937 41 GAGTTCTACACGCCGGTTGATGGGGGCACTGCTCACCTGTC GAGTTCTACACGCCGGTTGATAGGGGCACTGCTCACCTGTC < 41bp 0.439418228261995 0.830932914835217 0.30301076 0.68850154 prediction 0.661865829670434 Functional Gain - GGTLC2 ENSG00000100121 CDS Human protein_coding chr22:22988917 chr22:22988918 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_26682 0 0 0 0 1 Endoplasmic reticulum 0.438718833853838 0.447342783741495 0.37700308 0 hPsi_site_20406 iPseU_CNN:0.37700308;iRNA_PseU:0 20407 chr17 37792086 37792086 1 + C A SKCM 37792085 + 37792065 37792105 41 TCAGAGCCTGGGGAGGAACCTCAGCGCCCTTCCCCCTCTGA TCAGAGCCTGGGGAGGAACCTAAGCGCCCTTCCCCCTCTGA < 41bp 0.478397714425923 0.830928078302491 0.22791782 0.63011813 prediction 0.661856156604983 Functional Gain - PPP1R1B ENSG00000131771 CDS Human protein_coding chr17:37792085 chr17:37792086 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_26683 0 0 0 0 1 Ribosome 0.438718592995102 0.438718592995102 0.26023626 0 hPsi_site_20407 iPseU_CNN:0.26023626;iRNA_PseU:0 20408 chr18 43314302 43314302 1 + C A COAD 43314301 + 43314281 43314321 41 GGTGGGAGTACTCATGGCTGTCTTTTCGGACAAGGGAGACT GGTGGGAGTACTCATGGCTGTATTTTCGGACAAGGGAGACT < 41bp 0.541292604843585 0.872218664964658 0.32221115 0.4696915 prediction 0.661852120242147 Functional Gain - SLC14A1 ENSG00000141469 CDS Human protein_coding chr18:43314301 chr18:43314302 synonymous SNV . 0 22 hPsi_associated_SNPs_26684 0 0 0 0 2 exosome 0.442381823830418 0.438718597968159 0 0 hPsi_site_20408 iPseU_CNN:0;iRNA_PseU:0 20409 chr11 55136114 55136114 1 + C A UCEC 55136113 + 55136093 55136133 41 CCTATGGGGTCATATTACACTCTCTTAAGACTCAGAGTTTG CCTATGGGGTCATATTACACTATCTTAAGACTCAGAGTTTG < 41bp 0.501721910410723 0.83264201921777 0.3225511 0.35985377 prediction 0.661840217614093 Functional Gain - OR4A15 ENSG00000181958 CDS Human protein_coding chr11:55136113 chr11:55136114 nonsynonymous SNV 0.672 2 22 hPsi_associated_SNPs_26685 0 0 0 0 0 unknown 0.43871122144489 0.438725666586709 0 0 hPsi_site_20409 iPseU_CNN:0;iRNA_PseU:0 20410 chr19 57931064 57931064 1 + G A UCEC 57931063 + 57931043 57931083 41 GCAATGTGTTTCTGTAGGAGTGTCACAGGTCACAACTTTAA GCAATGTGTTTCTGTAGGAGTATCACAGGTCACAACTTTAA < 41bp 0.437250612663504 0.830919233659497 0.34348887 0.5584778 prediction 0.661838467318995 Functional Gain - ZNF17 ENSG00000186272;ENSG00000269533 CDS Human other chr19:57931063 chr19:57931064 synonymous SNV . 0 22 hPsi_associated_SNPs_26686 0 0 1 0 1 nucleus 0.438700110282304 0.438708178329112 0.1169556 0 hPsi_site_20410 iPseU_CNN:0.1169556;iRNA_PseU:0 20411 chr20 2593929 2593929 1 + C A UCEC 2593928 + 2593908 2593948 41 ACGGGCTTGTTTTGTGCGGTTCATGAACTACTGCTGGTGCT ACGGGCTTGTTTTGTGCGGTTAATGAACTACTGCTGGTGCT < 41bp 0.539936511424385 0.870852574603867 0.25849497 0.53587765 prediction 0.661832126358963 Functional Gain - TMC2 ENSG00000149488 CDS Human protein_coding chr20:2593928 chr20:2593929 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26687 0 0 0 0 2 exosome 0.438086055561732 0.43783370229621 0.0717553 0 hPsi_site_20411 iPseU_CNN:0.0717553;iRNA_PseU:0 20412 chr19 52272376 52272376 1 + C A LUAD 52272375 + 52272355 52272395 41 ACCTTGGATTCTTGCTCTAGTCCTTACCTTGCCAGTTTTCC ACCTTGGATTCTTGCTCTAGTACTTACCTTGCCAGTTTTCC < 41bp 0.470790238623535 0.830915428727919 0.19492105 0.3109489 prediction 0.661830857455837 Functional Gain - FPR2 ENSG00000171049 CDS Human protein_coding chr19:52272375 chr19:52272376 synonymous SNV . 0 22 hPsi_associated_SNPs_26688 0 0 0 0 0 exosome 0.438718591754337 0.43871680045795 0 0 hPsi_site_20412 iPseU_CNN:0;iRNA_PseU:0 20413 chr7 134930072 134930072 1 + C A UCEC 134930071 + 134930051 134930091 41 ACAGTTTTCCTCAGAATGGTTCCTCCCCTTGGTGCCCAACT ACAGTTTTCCTCAGAATGGTTACTCCCCTTGGTGCCCAACT < 41bp 0.512897927096524 0.843810102696039 0.14512482 0.38456735 prediction 0.661824351199029 Functional Gain - STRA8 ENSG00000146857 CDS Human protein_coding chr7:134930071 chr7:134930072 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26689 0 0 0 0 2 exosome 0.438718602155756 0.438718591871678 0 0 hPsi_site_20413 iPseU_CNN:0;iRNA_PseU:0 20414 chr5 140741388 140741388 1 + G A rs373553221 140741387 + 140741367 140741407 41 CAATGACAATGCGCCACGGGTGCTGTACCCCGCGCTGGGGC CAATGACAATGCGCCACGGGTACTGTACCCCGCGCTGGGGC < 41bp 0.428881065191382 0.830911033299057 0.7250728 0.94234383 prediction 0.661822066598115 Functional Gain - PCDHGB2 ENSG00000253910 CDS Human protein_coding chr5:140741387 chr5:140741388 synonymous SNV . 0 22 hPsi_associated_SNPs_26690 0 0 0 0 0 exosome 0.43871832285534 0.438718553818886 0.43454206 0 hPsi_site_20414 iPseU_CNN:0.43454206;iRNA_PseU:0 20415 chr2 233028259 233028259 1 + C A UCEC 233028258 + 233028238 233028278 41 TGGCGTGGATTTCTCTGATTTCTCTTCAGAAGTTCTAGAAT TGGCGTGGATTTCTCTGATTTATCTTCAGAAGTTCTAGAAT < 41bp 0.515548244695531 0.846452261226934 0.26014638 0.32753044 prediction 0.661808033062805 Functional Gain - DIS3L2 ENSG00000144535 CDS Human protein_coding chr2:233028258 chr2:233028259 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_26691 0 0 1 1 2 chromatin 0.438713859382875 0.438722778589774 0 0 hPsi_site_20415 iPseU_CNN:0;iRNA_PseU:0 20416 chr9 131810762 131810762 1 + G A rs540829362 131810761 + 131810741 131810781 41 AAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCC AAGAGCAACGACACCCTGAGTAGCATCTCTTCCATTGAGCC < 41bp 0.563848186056839 0.894751990699833 0.26128381 0.28709212 prediction 0.661807609285989 Functional Gain - MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131810761 chr9:131810762 nonsynonymous SNV 0.962 3 22 hPsi_associated_SNPs_26692 0 0 1 0 2 unknown 0.438718591091324 0.438719588537977 0 0 hPsi_site_20416 iPseU_CNN:0;iRNA_PseU:0 20417 chr22 46631044 46631044 1 + C A STAD 46631043 + 46631023 46631063 41 AGACTAGATCGTCCTGGCCTTCTAAACGTAGGACACATTGA AGACTAGATCGTCCTGGCCTTATAAACGTAGGACACATTGA < 41bp 0.489703428898318 0.830898058376599 0.22784743 0.22737971 prediction 0.661796116753199 Functional Gain - PPARA ENSG00000186951 CDS Human protein_coding chr22:46631043 chr22:46631044 nonsynonymous SNV 0.973 1 22 hPsi_associated_SNPs_26693 0 0 0 0 1 chromatin 0.438713137897078 0.438718260027397 0 0 hPsi_site_20417 iPseU_CNN:0;iRNA_PseU:0 20418 chr4 57797217 57797217 1 + G A CESC 57797216 + 57797196 57797236 41 CCAGAAGGAGCCTGTTCAGATGGAGCTGTCTCCTCCCATGG CCAGAAGGAGCCTGTTCAGATAGAGCTGTCTCCTCCCATGG < 41bp 0.488457610436428 0.830891166967815 0.21364272 0.27471143 prediction 0.66178233393563 Functional Gain - REST ENSG00000084093 CDS Human protein_coding chr4:57797216 chr4:57797217 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_26694 0 0 1 0 0 Ribosome 0.438718595164884 0.438718591970626 0 0 hPsi_site_20418 iPseU_CNN:0;iRNA_PseU:0 20419 chr2 71305524 71305524 1 + G A HNSC 71305523 + 71305503 71305543 41 CAGCTTCACCCTGATGAAGCTGAGGCACTCCTCCGCTCTGG CAGCTTCACCCTGATGAAGCTAAGGCACTCCTCCGCTCTGG < 41bp 0.422748037187414 0.830890780700843 0.2703031 0.31146407 prediction 0.661781561401686 Functional Gain - NAGK ENSG00000124357 CDS Human protein_coding chr2:71305523 chr2:71305524 synonymous SNV . 0 22 hPsi_associated_SNPs_26695 0 0 0 0 1 chromatin 0.438718593063341 0.43871859299481 0 0 hPsi_site_20419 iPseU_CNN:0;iRNA_PseU:0 20420 chr20 57016107 57016107 1 + C A CHOL 57016106 + 57016086 57016126 41 AAGAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGAGAA AAGAGGCTGCAAGGTGAAGTTAAGAGGCTACGGGAGGAGAA < 41bp 0.519932007080689 0.850820714507711 0.38112718 0.6292915 prediction 0.661777414854043 Functional Gain - VAPB ENSG00000124164 CDS Human protein_coding chr20:57016106 chr20:57016107 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_26696 0 0 1 0 1 Ribosome 0.438720139853217 0.438718678437355 0.258583 0 hPsi_site_20420 iPseU_CNN:0.258583;iRNA_PseU:0 20421 chr2 71891521 71891521 1 + G A UCEC 71891520 + 71891500 71891540 41 CGTCGACCTGGAGAACAGGCTGCTGTCCAAGTTTGGGGCTC CGTCGACCTGGAGAACAGGCTACTGTCCAAGTTTGGGGCTC < 41bp 0.522249010585002 0.853133218351744 0.33751106 0.7847074 prediction 0.661768415533486 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71891520 chr2:71891521 synonymous SNV . 0 22 hPsi_associated_SNPs_26697 0 0 0 0 1 Nucleus 0.438723129652799 0.438303800354624 0.5694148 0 hPsi_site_20421 iPseU_CNN:0.5694148;iRNA_PseU:0 20422 chrX 152773722 152773722 1 + C A LUAD 152773721 + 152773701 152773741 41 TTCAGGTGGTCTATCTGCACTCCAACAACATCACCAAAGTG TTCAGGTGGTCTATCTGCACTACAACAACATCACCAAAGTG < 41bp 0.516540310249452 0.847423574656903 0.3321712 0.5677406 prediction 0.661766528814902 Functional Gain - BGN ENSG00000182492 CDS Human protein_coding chrX:152773721 chrX:152773722 nonsynonymous SNV 0.982 1 22 hPsi_associated_SNPs_26698 0 0 0 3 1 Cytosol 0.438717957984106 0.439133203651173 0.1354812 0 hPsi_site_20422 iPseU_CNN:0.1354812;iRNA_PseU:0 20423 chr1 200880945 200880945 1 + G A BLCA 200880944 + 200880924 200880964 41 GGGCGGTACGTGGTGGTGGCTGAGAGCCCCCTGCCGCCTGG GGGCGGTACGTGGTGGTGGCTAAGAGCCCCCTGCCGCCTGG < 41bp 0.561463442778537 0.892346060553815 0.3156414 0.7082753 prediction 0.661765235550555 Functional Gain - C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200880944 chr1:200880945 nonsynonymous SNV 0.629 1 22 hPsi_associated_SNPs_26699 0 0 0 0 0 cytosol 0.438710314330692 0.438718592995282 0.4165506 0 hPsi_site_20423 iPseU_CNN:0.4165506;iRNA_PseU:0 20424 chr1 248112763 248112763 1 + G A rs4925790 248112762 + 248112742 248112782 41 GAGGGCACAGTGTTTTTGAGTGCCACCATCTTTCTCGTGTT GAGGGCACAGTGTTTTTGAGTACCACCATCTTTCTCGTGTT < 41bp 0.45037242999078 0.830879055647261 0.30249912 0.38541794 prediction 0.661758111294522 Functional Gain - OR2L8 ENSG00000196936 CDS Human other chr1:248112762 chr1:248112763 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26700 0 0 0 0 0 unknown 0.438767387478244 0.438719610466687 0 0 hPsi_site_20424 iPseU_CNN:0;iRNA_PseU:0 20425 chr13 28519465 28519465 1 + G A LUSC 28519464 + 28519444 28519484 41 CCAGATCTGTGCAAAAGTAGTGAGAGATGCACTGAAGACAG CCAGATCTGTGCAAAAGTAGTAAGAGATGCACTGAAGACAG < 41bp 0.537638855935429 0.868516772343928 0.21680775 0.5483273 prediction 0.661755832816998 Functional Gain - PDX1;LINC00543 ENSG00000180389 CDS Human protein_coding chr13:28519464 chr13:28519465 synonymous SNV . 0 22 hPsi_associated_SNPs_26701 0 0 0 3 0 unknown 0.439428853734235 0.438915932997675 0.0966545999999999 0 hPsi_site_20425 iPseU_CNN:0.0966545999999999;iRNA_PseU:0 20426 chr1 22913032 22913032 1 + C A rs557217944 22913031 + 22913011 22913051 41 CAGCTGTGTGCCCGCTGCCCTCCCCACAGCCACTCCGCAGC CAGCTGTGTGCCCGCTGCCCTACCCACAGCCACTCCGCAGC < 41bp 0.46573189850007 0.830869754617478 0.25326023 0.78038853 prediction 0.661739509234956 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22913031 chr1:22913032 nonsynonymous SNV 0.665 0 22 hPsi_associated_SNPs_26702 0 0 0 0 2 exosome 0.438718592716171 0.438639272855172 0.56077706 0 hPsi_site_20426 iPseU_CNN:0.56077706;iRNA_PseU:0 20427 chr11 2339129 2339129 1 + G A HNSC 2339128 + 2339108 2339148 41 GTCGCGGTGGGCTCAGTGGGTGCCCTGAGCGGGGTCTCTCA GTCGCGGTGGGCTCAGTGGGTACCCTGAGCGGGGTCTCTCA < 41bp 0.447301289683666 0.830862837929411 0.25551516 0.6804749 prediction 0.661725675858821 Functional Gain - TSPAN32 ENSG00000064201 CDS Human protein_coding chr11:2339128 chr11:2339129 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26703 0 0 0 0 1 Endoplasmic reticulum 0.4389315160154 0.438718699458079 0.3609498 0 hPsi_site_20427 iPseU_CNN:0.3609498;iRNA_PseU:0 20428 chrX 69646277 69646277 1 + C A UCEC 69646276 + 69646256 69646296 41 TGGCCTTGTGGGACTGGACATCCAATGGCAGCAGGAGTGGC TGGCCTTGTGGGACTGGACATACAATGGCAGCAGGAGTGGC < 41bp 0.456150596512505 0.830861005309313 0.33261538 0.36747026 prediction 0.661722010618625 Functional Gain - GDPD2 ENSG00000130055 CDS Human protein_coding chrX:69646276 chrX:69646277 synonymous SNV . 0 22 hPsi_associated_SNPs_26704 0 0 0 0 2 exosome 0.440022676121589 0.438934749841443 0 0 hPsi_site_20428 iPseU_CNN:0;iRNA_PseU:0 20429 chr10 81373539 81373539 1 + C A GBM 81373538 + 81373518 81373558 41 GACAGTAGGAGAGAAGGTCTTCTCCAGCAATGGGCAGTCCA GACAGTAGGAGAGAAGGTCTTATCCAGCAATGGGCAGTCCA < 41bp 0.52851400099387 0.859369459919051 0.30120975 0.6023353 prediction 0.661710917850363 Functional Gain - SFTPA1 ENSG00000122852 CDS Human protein_coding chr10:81373538 chr10:81373539 nonsynonymous SNV 0.424 4 22 hPsi_associated_SNPs_26705 0 0 0 0 1 unknown 0.43874167331136 0.438719417445616 0.2046706 0 hPsi_site_20429 iPseU_CNN:0.2046706;iRNA_PseU:0 20430 chr16 3340413 3340413 1 + G A CESC 3340412 + 3340392 3340432 41 AACCCTATACCTGTCATGAGTGCGGAGACAGCTTCTCTCAC AACCCTATACCTGTCATGAGTACGGAGACAGCTTCTCTCAC < 41bp 0.427335576502386 0.83085541559512 0.42207077 0.6155798 prediction 0.66171083119024 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3340412 chr16:3340413 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26706 0 0 0 0 0 Cytosol 0.438671218488471 0.43854979034514 0.2311596 0 hPsi_site_20430 iPseU_CNN:0.2311596;iRNA_PseU:0 20431 chr14 74824599 74824599 1 + G A CESC 74824598 + 74824578 74824618 41 CCCCAGGGAGGTGCTGGGCATGGAGGAGCTAGAGAAGCTGC CCCCAGGGAGGTGCTGGGCATAGAGGAGCTAGAGAAGCTGC < 41bp 0.437492178375607 0.830851209759953 0.2297599 0.5528697 prediction 0.661702419519907 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74824598 chr14:74824599 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_26707 0 0 0 0 0 unknown 0.438718323137732 0.438718592796236 0.1057394 0 hPsi_site_20431 iPseU_CNN:0.1057394;iRNA_PseU:0 20432 chr12 52629142 52629142 1 + C A LUAD 52629141 + 52629121 52629161 41 GCAGGATGTGGTGGAGGACTTCAAGAATAAGTAATGCCCCC GCAGGATGTGGTGGAGGACTTAAAGAATAAGTAATGCCCCC < 41bp 0.531085838529539 0.861934707148109 0.29870522 0.4570641 prediction 0.661697737237141 Functional Gain - KRT7 ENSG00000135480 CDS Human protein_coding chr12:52629141 chr12:52629142 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26708 0 0 0 0 1 Cytosol 0.438718592812384 0.438718592994999 0 0 hPsi_site_20432 iPseU_CNN:0;iRNA_PseU:0 20433 chr16 30666289 30666289 1 + C A SKCM 30666288 + 30666268 30666308 41 CCTCTCTGGGCCGAAGCTACTCCTGCCCTGATCTGGGGCCC CCTCTCTGGGCCGAAGCTACTACTGCCCTGATCTGGGGCCC < 41bp 0.461501809085645 0.830836888613586 0.20150986 0.3397354 prediction 0.661673777227171 Functional Gain - PRR14 ENSG00000156858 CDS Human protein_coding chr16:30666288 chr16:30666289 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26709 0 0 1 0 0 Cytosol 0.438718635908279 0.442310263404874 0 0 hPsi_site_20433 iPseU_CNN:0;iRNA_PseU:0 20434 chr11 18159568 18159568 1 + C A STAD 18159567 + 18159547 18159587 41 TGCCAACCCCATCATTTACTTCTTCGTGGGCTCCTTTAGGC TGCCAACCCCATCATTTACTTATTCGTGGGCTCCTTTAGGC < 41bp 0.47238029447223 0.830834487513191 0.25707632 0.413125 prediction 0.661668975026381 Functional Gain - MRGPRX3 ENSG00000179826 CDS Human protein_coding chr11:18159567 chr11:18159568 nonsynonymous SNV 0.597 1 22 hPsi_associated_SNPs_26710 0 0 0 0 0 exosome 0.43871859299504 0.438718599025172 0 0 hPsi_site_20434 iPseU_CNN:0;iRNA_PseU:0 20435 chr17 7343077 7343077 1 + G A LUSC 7343076 + 7343056 7343096 41 CCAGAAGCAGCTCCTCATCCTGCTGTCCAAGGTGCGACTGT CCAGAAGCAGCTCCTCATCCTACTGTCCAAGGTGCGACTGT < 41bp 0.444329072759209 0.830827319582134 0.3421579 0.7376796 prediction 0.661654639164269 Functional Gain - FGF11 ENSG00000161958 CDS Human protein_coding chr17:7343076 chr17:7343077 synonymous SNV . 0 22 hPsi_associated_SNPs_26711 0 0 0 0 1 exosome 0.438718507592564 0.438718592935172 0.4753592 0 hPsi_site_20435 iPseU_CNN:0.4753592;iRNA_PseU:0 20436 chr11 60198365 60198365 1 + C A UCEC 60198364 + 60198344 60198384 41 CCAAGGTTTCCCTTTATATTTCTTTCAGGATATCCATTCTG CCAAGGTTTCCCTTTATATTTATTTCAGGATATCCATTCTG < 41bp 0.523843540971287 0.854663540906256 0.5615345 0.5313198 prediction 0.661639999869938 Functional Gain - MS4A5 ENSG00000166930 CDS Human protein_coding chr11:60198364 chr11:60198365 nonsynonymous SNV 0.924 0 22 hPsi_associated_SNPs_26712 0 0 0 0 2 unknown 0.438718592995102 0.438718592995102 0 0 hPsi_site_20436 iPseU_CNN:0;iRNA_PseU:0 20437 chr1 23240062 23240062 1 + G A SKCM 23240061 + 23240041 23240081 41 AGATTCAGTCTGTGGAGGTTTGACATTCACCTGCCTCGGCT AGATTCAGTCTGTGGAGGTTTAACATTCACCTGCCTCGGCT < 41bp 0.44251508677457 0.830814829786451 0.5082299 0.7074788 prediction 0.661629659572902 Functional Gain - EPHB2 ENSG00000133216 CDS Human protein_coding chr1:23240061 chr1:23240062 synonymous SNV . 0 22 hPsi_associated_SNPs_26713 0 0 1 0 0 Endoplasmic reticulum 0.438718592995105 0.438718591296347 0.3984978 0 hPsi_site_20437 iPseU_CNN:0.3984978;iRNA_PseU:0 20438 chr12 6954789 6954789 1 + G A UCEC 6954788 + 6954768 6954808 41 GCCATCTGCACGGGCTCGGATGACGCTTCCTGCCGCTTGTT GCCATCTGCACGGGCTCGGATAACGCTTCCTGCCGCTTGTT < 41bp 0.574868670774457 0.905683143577164 0.31290168 0.6877281 prediction 0.661628945605413 Functional Gain - GNB3 ENSG00000111664 CDS Human protein_coding chr12:6954788 chr12:6954789 nonsynonymous SNV 0.580 3 22 hPsi_associated_SNPs_26714 0 0 1 0 1 nucleolus 0.438719338076693 0.438690179424401 0.3754562 0 hPsi_site_20438 iPseU_CNN:0.3754562;iRNA_PseU:0 20439 chr3 183908992 183908992 1 + C A UCEC 183908991 + 183908971 183909011 41 CTACTACGATCCGAAGCACGTCATCTTCAGTCGCCTCTCTG CTACTACGATCCGAAGCACGTAATCTTCAGTCGCCTCTCTG < 41bp 0.470056832755 0.830814039734895 0.14983913 0.42817417 prediction 0.66162807946979 Functional Gain - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183908991 chr3:183908992 synonymous SNV . 0 22 hPsi_associated_SNPs_26715 0 0 0 0 2 Cytosol 0.438697941975829 0.438717101074449 0 0 hPsi_site_20439 iPseU_CNN:0;iRNA_PseU:0 20440 chr2 132288346 132288346 1 + G A UCEC 132288345 + 132288325 132288365 41 GCCGACACTGTGCGCTCTCCTGCAGACAGCCTCTCCATGTC GCCGACACTGTGCGCTCTCCTACAGACAGCCTCTCCATGTC < 41bp 0.573567334412606 0.904377834928437 0.22210503 0.3404768 prediction 0.661621001031663 Functional Gain - CCDC74A ENSG00000163040 CDS Human protein_coding chr2:132288345 chr2:132288346 nonsynonymous SNV 0.020 1 22 hPsi_associated_SNPs_26716 0 0 0 0 1 nucleolus 0.438632469220525 0.438907671904198 0 0 hPsi_site_20440 iPseU_CNN:0;iRNA_PseU:0 20441 chr11 64951009 64951009 1 + G A UCEC 64951008 + 64950988 64951028 41 CGACACCCTCCTGCACCGAGTGGTTCCGCACGGCCAGAGCT CGACACCCTCCTGCACCGAGTAGTTCCGCACGGCCAGAGCT < 41bp 0.421834281840103 0.830807559473461 0.20979196 0.31916994 prediction 0.661615118946921 Functional Gain - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64951008 chr11:64951009 synonymous SNV . 0 22 hPsi_associated_SNPs_26717 0 0 0 0 2 Ribosome 0.438721855699274 0.438537590110323 0 0 hPsi_site_20441 iPseU_CNN:0;iRNA_PseU:0 20442 chr3 47451515 47451515 1 + G A HNSC 47451514 + 47451494 47451534 41 GTGGAAGCAGGAGACCCCCCTGAGGAGCTGCGCAGCCTCCC GTGGAAGCAGGAGACCCCCCTAAGGAGCTGCGCAGCCTCCC < 41bp 0.418388314414441 0.830804238725148 0.26629394 0.32369363 prediction 0.661608477450295 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47451514 chr3:47451515 nonsynonymous SNV 0.574 3 22 hPsi_associated_SNPs_26718 0 0 1 0 1 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_20442 iPseU_CNN:0;iRNA_PseU:0 20443 chr11 61136079 61136079 1 + G A rs553815473 61136078 + 61136058 61136098 41 CCTCCCCACAGCAGCAGTGTTGTACTGCTACTTCTATAAAC CCTCCCCACAGCAGCAGTGTTATACTGCTACTTCTATAAAC < 41bp 0.56617409316846 0.896967436679536 0.22381139 0.581739 prediction 0.661586687022152 Functional Gain - TMEM138 ENSG00000149483 CDS Human protein_coding chr11:61136078 chr11:61136079 synonymous SNV . 0 22 hPsi_associated_SNPs_26719 1 0 1 1 1 Endoplasmic reticulum 0.438578279219907 0.438718605347986 0.163478 0 hPsi_site_20443 iPseU_CNN:0.163478;iRNA_PseU:0 20444 chr10 25312249 25312249 1 + C A COAD 25312248 + 25312228 25312268 41 GATAAACATGCACAGCGATTTCTTTCAAGAACCTTTGCACT GATAAACATGCACAGCGATTTATTTCAAGAACCTTTGCACT < 41bp 0.491346269644718 0.830791231321648 0.4782666 0.73226535 prediction 0.661582462643297 Functional Gain - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25312248 chr10:25312249 nonsynonymous SNV 0.769 1 22 hPsi_associated_SNPs_26720 0 0 1 0 0 Cytosol 0.438367463661162 0.438686942463569 0.4645307 0 hPsi_site_20444 iPseU_CNN:0.4645307;iRNA_PseU:0 20445 chr3 5025027 5025027 1 + G A HNSC 5025026 + 5025006 5025046 41 AACCGGATGCAGCTTTCGGATGATGAAGGCCATTTCACTAG AACCGGATGCAGCTTTCGGATAATGAAGGCCATTTCACTAG < 41bp 0.413418513492508 0.830790686484806 0.22726017 0.6128141 prediction 0.661581372969613 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025026 chr3:5025027 nonsynonymous SNV 0.860 0 22 hPsi_associated_SNPs_26721 0 0 1 0 0 chromatin 0.438718655397165 0.438718593080611 0.2256282 0 hPsi_site_20445 iPseU_CNN:0.2256282;iRNA_PseU:0 20446 chr5 68524087 68524087 1 + C A rs77654238 68524086 + 68524066 68524106 41 CTTCTGTAATTTCACAACATTCTAAAGGAAGTAAATCACCA CTTCTGTAATTTCACAACATTATAAAGGAAGTAAATCACCA < 41bp 0.506991849437306 0.837780005869161 0.3036068 0.28492695 prediction 0.66157631286371 Functional Gain - MRPS36 ENSG00000134056 CDS Human protein_coding chr5:68524086 chr5:68524087 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26722 0 0 1 3 1 Ribosome 0.43871863332409 0.43871825516603 0 0 hPsi_site_20446 iPseU_CNN:0;iRNA_PseU:0 20447 chr2 44078796 44078796 1 + C A COAD 44078795 + 44078775 44078815 41 CAAGATCAAGTCAGGCCAGATCTGGATCAATGGGCAGCCCA CAAGATCAAGTCAGGCCAGATATGGATCAATGGGCAGCCCA < 41bp 0.534498160779952 0.865283242617125 0.64749634 0.67891717 prediction 0.661570163674346 Functional Gain - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44078795 chr2:44078796 synonymous SNV . 0 22 hPsi_associated_SNPs_26723 0 0 1 0 1 cytosol 0.438718593012425 0.438709981248798 0.0628416599999999 0 hPsi_site_20447 iPseU_CNN:0.0628416599999999;iRNA_PseU:0 20448 chr1 206904486 206904486 1 + G A BRCA 206904485 + 206904465 206904505 41 TTCCTCCTGTTGATGCAGGCTGTGTGGGTATCCCCCCTTCT TTCCTCCTGTTGATGCAGGCTATGTGGGTATCCCCCCTTCT < 41bp 0.414686176347038 0.830773431017827 0.29961792 0.46891335 prediction 0.661546862035654 Functional Gain - MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206904485 chr1:206904486 synonymous SNV . 0 22 hPsi_associated_SNPs_26724 0 0 1 0 1 Ribosome 0.438718592473787 0.438718543905416 0 0 hPsi_site_20448 iPseU_CNN:0;iRNA_PseU:0 20449 chrX 30237555 30237555 1 + G A UCEC 30237554 + 30237534 30237574 41 CTATGCTGAAACCAGCAAGATGAAAGTCCTGGAGTTTTTGG CTATGCTGAAACCAGCAAGATAAAAGTCCTGGAGTTTTTGG < 41bp 0.443168593836496 0.830763831256447 0.2861297 0.4151692 prediction 0.661527662512895 Functional Gain - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237554 chrX:30237555 nonsynonymous SNV 0.951 2 22 hPsi_associated_SNPs_26725 0 0 1 0 0 exosome 0.438716401800196 0.438718618954453 0 0 hPsi_site_20449 iPseU_CNN:0;iRNA_PseU:0 20450 chr19 50946815 50946815 1 + G A BRCA 50946814 + 50946794 50946834 41 AACAAGTGCACGCTGGCGGATGACGCTGCCTATGAAGTAGC AACAAGTGCACGCTGGCGGATAACGCTGCCTATGAAGTAGC < 41bp 0.41466445369062 0.83076354511012 0.20470846 0.3653035 prediction 0.661527090220239 Functional Gain - MYBPC2 ENSG00000086967 CDS Human protein_coding chr19:50946814 chr19:50946815 nonsynonymous SNV 0.038 3 22 hPsi_associated_SNPs_26726 0 0 0 0 2 exosome 0.438718608774139 0.438718592606021 0 0 hPsi_site_20450 iPseU_CNN:0;iRNA_PseU:0 20451 chr1 17657528 17657528 1 + G A UCEC 17657527 + 17657507 17657547 41 CCAGGGGTGGTCGTGGATATTGCCCACGGCCCTCCAGCCAA CCAGGGGTGGTCGTGGATATTACCCACGGCCCTCCAGCCAA < 41bp 0.572786594440213 0.903544659382957 0.18374449 0.46629328 prediction 0.661516129885489 Functional Gain - PADI4 ENSG00000159339 CDS Human protein_coding chr1:17657527 chr1:17657528 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26727 0 0 0 0 1 exosome 0.438718591776555 0.438741212714095 0 0 hPsi_site_20451 iPseU_CNN:0;iRNA_PseU:0 20452 chr12 53825187 53825187 1 + G A BLCA 53825186 + 53825166 53825206 41 GTAGGCCTCAGCGGAGTGCCTGCCACTTCAGCGTTCAGCAA GTAGGCCTCAGCGGAGTGCCTACCACTTCAGCGTTCAGCAA < 41bp 0.450457374174673 0.830756733327692 0.19769314 0.37464416 prediction 0.661513466655385 Functional Gain - AMHR2 ENSG00000135409 CDS Human protein_coding chr12:53825186 chr12:53825187 nonsynonymous SNV 0.021 2 22 hPsi_associated_SNPs_26728 0 0 1 0 0 exosome 0.43872138424642 0.438717059358591 0 0 hPsi_site_20452 iPseU_CNN:0;iRNA_PseU:0 20453 chr9 35548090 35548090 1 + G A SKCM 35548089 + 35548069 35548109 41 GTTGAGTTGCCCAGTGCGCTTGAGTGAGGGCCCTGCAGCCA GTTGAGTTGCCCAGTGCGCTTAAGTGAGGGCCCTGCAGCCA < 41bp 0.566129389796212 0.896886069318362 0.45692375 0.8472435 prediction 0.661513359044301 Functional Gain - RUSC2 ENSG00000198853 CDS Human protein_coding chr9:35548089 chr9:35548090 synonymous SNV . 0 22 hPsi_associated_SNPs_26729 0 0 0 0 0 Cytosol 0.438664560038922 0.438659705212626 0.694487 0 hPsi_site_20453 iPseU_CNN:0.694487;iRNA_PseU:0 20454 chr8 86389448 86389448 1 + C A rs548376992 86389447 + 86389427 86389467 41 TCACTGACCACCCCTCCTCTTCTGGAATGTGTGACCTGGAT TCACTGACCACCCCTCCTCTTATGGAATGTGTGACCTGGAT < 41bp 0.462547036929212 0.830746416636125 0.32233298 0.3383962 prediction 0.661492833272249 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86389447 chr8:86389448 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26730 0 0 1 0 2 Ribosome 0.438715909744346 0.438716438454654 0 0 hPsi_site_20454 iPseU_CNN:0;iRNA_PseU:0 20455 chr1 37945909 37945909 1 + C A UCEC 37945908 + 37945888 37945928 41 CAGCCATGGGAACAAGGAGGTCTTCTCCTGCCGGGGCATCC CAGCCATGGGAACAAGGAGGTATTCTCCTGCCGGGGCATCC < 41bp 0.533643605310657 0.864383332981074 0.42658487 0.87862337 prediction 0.661479455340833 Functional Gain - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37945908 chr1:37945909 synonymous SNV . 0 22 hPsi_associated_SNPs_26731 0 0 1 0 1 Nucleus 0.438718593050573 0.438745992658809 0.75724674 0 hPsi_site_20455 iPseU_CNN:0.75724674;iRNA_PseU:0 20456 chr12 13065406 13065406 1 + C A BRCA 13065405 + 13065385 13065425 41 AGCCTCCCCAAAAGGAATTCTCCATCCCACGGGCCCACGCT AGCCTCCCCAAAAGGAATTCTACATCCCACGGGCCCACGCT < 41bp 0.509984297527665 0.840716896103077 0.4213834 0.7960001 prediction 0.661465197150824 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13065405 chr12:13065406 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_26732 0 0 0 0 1 Nucleus 0.43871846275224 0.438716494436038 0.5920002 0 hPsi_site_20456 iPseU_CNN:0.5920002;iRNA_PseU:0 20457 chr12 56118164 56118164 1 + G A BRCA 56118163 + 56118143 56118183 41 TGACCCGGACCTAACCAAGGTGAGCCGATGCCTGGAGCATG TGACCCGGACCTAACCAAGGTAAGCCGATGCCTGGAGCATG < 41bp 0.436879284985974 0.83072386155193 0.2152541 0.4277726 prediction 0.66144772310386 Functional Gain - RDH5 ENSG00000135437 CDS Human protein_coding chr12:56118163 chr12:56118164 synonymous SNV . 0 22 hPsi_associated_SNPs_26733 0 0 1 0 1 Cytosol 0.438722849555929 0.438718772575443 0 0 hPsi_site_20457 iPseU_CNN:0;iRNA_PseU:0 20458 chr10 5967374 5967374 1 + G T UCEC 5967373 + 5967353 5967393 41 AAAGCCAAAGGCCTGGAGTTTGACACTGTGCATGTTTTGGA AAAGCCAAAGGCCTGGAGTTTTACACTGTGCATGTTTTGGA < 41bp 0.497044940447351 0.830712043619747 0.19548592 0.25599718 prediction 0.661424087239494 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5967373 chr10:5967374 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_26734 0 0 1 0 1 Ribosome 0.438718592995192 0.438619932768536 0 0 hPsi_site_20458 iPseU_CNN:0;iRNA_PseU:0 20459 chr20 25239951 25239951 1 + G T COAD 25239950 + 25239930 25239970 41 GTGAACCTGGGCCTTCAGAATGCCTGCGATGAAGCCATCTA GTGAACCTGGGCCTTCAGAATTCCTGCGATGAAGCCATCTA < 41bp 0.499363109908895 0.830711705860455 0.19884679 0.30116653 prediction 0.66142341172091 Functional Gain - PYGB ENSG00000100994 CDS Human protein_coding chr20:25239950 chr20:25239951 nonsynonymous SNV 0.939 2 22 hPsi_associated_SNPs_26735 0 0 1 0 2 Nucleus 0.438786975763336 0.438830185626095 0 0 hPsi_site_20459 iPseU_CNN:0;iRNA_PseU:0 20460 chr2 175264800 175264800 1 + G A HNSC 175264799 + 175264779 175264819 41 GGAAGAGAAGAAGTTTGTGATGAAGAAGCACTATTAGGAAT GGAAGAGAAGAAGTTTGTGATAAAGAAGCACTATTAGGAAT < 41bp 0.433328941859605 0.830709634295303 0.26976788 0.33443803 prediction 0.661419268590607 Functional Gain - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175264799 chr2:175264800 nonsynonymous SNV 0.939 1 22 hPsi_associated_SNPs_26736 0 0 1 0 0 exosome 0.438723754053056 0.438717509287868 0 0 hPsi_site_20460 iPseU_CNN:0;iRNA_PseU:0 20461 chr6 167754154 167754154 1 + C A UCEC 167754153 + 167754133 167754173 41 ATTGGCAGATATAAATGTGATCTCCGCATCTATGTTTGTGT ATTGGCAGATATAAATGTGATATCCGCATCTATGTTTGTGT < 41bp 0.515463469946228 0.846165914703445 0.22008115 0.2784344 prediction 0.661404889514435 Functional Gain - TTLL2 ENSG00000120440 CDS Human protein_coding chr6:167754153 chr6:167754154 nonsynonymous SNV 0.953 4 22 hPsi_associated_SNPs_26737 0 0 0 1 0 Exosome 0.438696910323098 0.430762447882172 0 0 hPsi_site_20461 iPseU_CNN:0;iRNA_PseU:0 20462 chr21 46021414 46021414 1 + G A rs201563690 46021413 + 46021393 46021433 41 CATGCTGCCAGCAGTCTAGCTGCCAGCCGGCTTGCTGCACC CATGCTGCCAGCAGTCTAGCTACCAGCCGGCTTGCTGCACC < 41bp 0.557554633078299 0.888256730420368 0.20769906 0.5787631 prediction 0.661404194684138 Functional Gain - KRTAP10-7 ENSG00000205441 CDS Human other chr21:46021413 chr21:46021414 nonsynonymous SNV 0.059 0 22 hPsi_associated_SNPs_26738 0 0 0 0 0 unknown 0.43867357981361 0.438385605018439 0.1575262 0 hPsi_site_20462 iPseU_CNN:0.1575262;iRNA_PseU:0 20463 chr6 13615851 13615851 1 + G A rs117650296 13615850 + 13615830 13615870 41 GCGGCGAGTGCGGGAGACCGTGCGCAGGTTCGGAGCCCGCT GCGGCGAGTGCGGGAGACCGTACGCAGGTTCGGAGCCCGCT < 41bp 0.562368414011088 0.893061870875935 0.5411894 0.77035034 prediction 0.661386913729694 Functional Gain - NOL7 ENSG00000225921 CDS Human protein_coding chr6:13615850 chr6:13615851 synonymous SNV . 0 22 hPsi_associated_SNPs_26739 0 0 1 0 1 Ribosome 0.438715924124333 0.438713585180382 0.45832188 0 hPsi_site_20463 iPseU_CNN:0.45832188;iRNA_PseU:0 20464 chr17 694835 694835 1 + G A COAD 694834 + 694814 694854 41 TATGGGCGCACATTTCCGGATGCCCATTATCAATAATCTGG TATGGGCGCACATTTCCGGATACCCATTATCAATAATCTGG < 41bp 0.427409763637808 0.830685949491088 0.16463593 0.62743807 prediction 0.661371898982177 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:694834 chr17:694835 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_26740 0 0 1 0 1 chromatin 0.438715562224069 0.438717343679823 0.25487614 0 hPsi_site_20464 iPseU_CNN:0.25487614;iRNA_PseU:0 20465 chrX 149639363 149639363 1 + C A READ 149639362 + 149639342 149639382 41 GCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCA GCAGCAGCAAGCAAATGTGATATTTAAGCCCATAAGCAGCA < 41bp 0.532228977259849 0.862908530351193 0.42258662 0.67840445 prediction 0.661359106182688 Functional Gain - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149639362 chrX:149639363 synonymous SNV . 0 22 hPsi_associated_SNPs_26741 0 0 0 0 0 Nucleus 0.4387526003012 0.439270420320348 0.3568089 0 hPsi_site_20465 iPseU_CNN:0.3568089;iRNA_PseU:0 20466 chr1 228345744 228345744 1 + G A rs148764840 228345743 + 228345723 228345763 41 CACGCCCTCGGTCATGTACCTGGGCTACGCCGTGCACCGCC CACGCCCTCGGTCATGTACCTAGGCTACGCCGTGCACCGCC < 41bp 0.557807969120031 0.888487102338716 0.25661427 0.44795656 prediction 0.66135826643737 Functional Gain - GJC2 ENSG00000198835 CDS Human protein_coding chr1:228345743 chr1:228345744 synonymous SNV . 0 22 hPsi_associated_SNPs_26742 0 0 1 0 0 chromatin 0.438718483057622 0.43871791545904 0 0 hPsi_site_20466 iPseU_CNN:0;iRNA_PseU:0 20467 chr1 6693065 6693065 1 + G A STAD 6693064 + 6693044 6693084 41 GAGGCTGGTGATGCGAAGGATGTCCAGCCGCCTCCGTGCTT GAGGCTGGTGATGCGAAGGATATCCAGCCGCCTCCGTGCTT < 41bp 0.561847739302653 0.892525918880405 0.38765335 0.69736195 prediction 0.661356359155505 Functional Gain - THAP3 ENSG00000041988 CDS Human protein_coding chr1:6693064 chr1:6693065 nonsynonymous SNV 0.095 2 22 hPsi_associated_SNPs_26743 0 0 0 0 0 Ribosome 0.438718472703297 0.438718594831474 0.3947239 0 hPsi_site_20467 iPseU_CNN:0.3947239;iRNA_PseU:0 20468 chr3 51978185 51978185 1 + C A LUAD 51978184 + 51978164 51978204 41 GTTCTACATCATCCAGCTGCTCCAAGACAGCAACCGCTTCT GTTCTACATCATCCAGCTGCTACAAGACAGCAACCGCTTCT < 41bp 0.529888305177839 0.860564623737822 0.26103908 0.48025477 prediction 0.661352637119966 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978184 chr3:51978185 synonymous SNV . 0 22 hPsi_associated_SNPs_26744 0 0 0 0 2 nucleus 0.438718944643203 0.438784127207242 0 0 hPsi_site_20468 iPseU_CNN:0;iRNA_PseU:0 20469 chr7 150763981 150763981 1 + G A GBM 150763980 + 150763960 150764000 41 TGGGGTGCGGCGGCACTTGGTGCGGAAGAATGCCAAAGGTT TGGGGTGCGGCGGCACTTGGTACGGAAGAATGCCAAAGGTT < 41bp 0.570763961488957 0.901438906146153 0.58075225 0.9202012 prediction 0.661349889314393 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150763980 chr7:150763981 synonymous SNV . 0 22 hPsi_associated_SNPs_26745 0 0 1 0 2 Ribosome 0.43872612958601 0.438717844393628 0.6788979 0 hPsi_site_20469 iPseU_CNN:0.6788979;iRNA_PseU:0 20470 chr12 51634823 51634823 1 + G A GBM 51634822 + 51634802 51634842 41 GTCGGTCCCATCTATCCACCTGGCTCCACAGTGCTGGTGGA GTCGGTCCCATCTATCCACCTAGCTCCACAGTGCTGGTGGA < 41bp 0.421114813012993 0.830674810569559 0.123384 0.21754473 prediction 0.661349621139119 Functional Gain - DAZAP2 ENSG00000183283 CDS Human protein_coding chr12:51634822 chr12:51634823 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_26746 0 0 1 0 2 Ribosome 0.438718591269305 0.43871861184596 0 0 hPsi_site_20470 iPseU_CNN:0;iRNA_PseU:0 20471 chr18 44603773 44603773 1 + G T UCEC 44603772 + 44603752 44603792 41 GACAGAGTTACTGGTGCAGATGGATGGGCTGGCACGCTCAG GACAGAGTTACTGGTGCAGATTGATGGGCTGGCACGCTCAG < 41bp 0.494839353858453 0.830669289720594 0.2520632 0.26177803 prediction 0.661338579441188 Functional Gain - KATNAL2 ENSG00000167216 CDS Human protein_coding chr18:44603772 chr18:44603773 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26747 0 0 0 0 2 chromatin 0.438720657457805 0.438717998761922 0 0 hPsi_site_20471 iPseU_CNN:0;iRNA_PseU:0 20472 chr19 10132055 10132055 1 + C A UCEC 10132054 + 10132034 10132074 41 CACTACTTCCGGGACCTCTATCTCCCAGCCTCCAGGAAGCT CACTACTTCCGGGACCTCTATATCCCAGCCTCCAGGAAGCT < 41bp 0.456091828717974 0.830668895792969 0.6711268 0.6721125 prediction 0.661337791585938 Functional Gain - RDH8 ENSG00000080511 CDS Human protein_coding chr19:10132054 chr19:10132055 nonsynonymous SNV 0.896 2 22 hPsi_associated_SNPs_26748 0 0 0 0 1 unknown 0.438718832962674 0.439217114549331 0.00197139999999996 0 hPsi_site_20472 iPseU_CNN:0.00197139999999996;iRNA_PseU:0 20473 chr12 21608129 21608129 1 + C A UCEC 21608128 + 21608108 21608148 41 TAAAGCTATAGGGAATACTTTCTTCGATGCAGGAGCAGCTG TAAAGCTATAGGGAATACTTTATTCGATGCAGGAGCAGCTG < 41bp 0.471725461596935 0.830667110160493 0.42582598 0.7280433 prediction 0.661334220320986 Functional Gain - PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21608128 chr12:21608129 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_26749 0 0 0 0 2 Cytosol 0.438717865116996 0.458597190519262 0.4560866 0 hPsi_site_20473 iPseU_CNN:0.4560866;iRNA_PseU:0 20474 chr14 52460504 52460504 1 + C A UCEC 52460503 + 52460483 52460523 41 CAAGAAGCTATTGACTGGCTTCTTGGTTTAGCTGTTAGACT CAAGAAGCTATTGACTGGCTTATTGGTTTAGCTGTTAGACT < 41bp 0.52508919827189 0.855756228089668 0.54854757 0.44520095 prediction 0.661334059635556 Functional Gain - C14orf166 ENSG00000087302 CDS Human protein_coding chr14:52460503 chr14:52460504 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26750 0 0 1 0 2 Ribosome 0.438879414174114 0.438722169073523 0 0 hPsi_site_20474 iPseU_CNN:0;iRNA_PseU:0 20475 chr7 100197746 100197746 1 + G A UCEC 100197745 + 100197725 100197765 41 AGAGTTCAGCAAGGAGCTGCTGGGCTGCGGCTGTGGGGCTG AGAGTTCAGCAAGGAGCTGCTAGGCTGCGGCTGTGGGGCTG < 41bp 0.42542550585386 0.830662801493692 0.25713253 0.31334642 prediction 0.661325602987384 Functional Gain - FBXO24 ENSG00000106336 CDS Human protein_coding chr7:100197745 chr7:100197746 synonymous SNV . 0 22 hPsi_associated_SNPs_26751 0 0 0 0 2 exosome 0.438718728527334 0.438135035634179 0 0 hPsi_site_20475 iPseU_CNN:0;iRNA_PseU:0 20476 chr16 56995987 56995987 1 + C A BLCA 56995986 + 56995966 56996006 41 GGCAGGCATCGTGTGCCGCATCACCAAGCCTGCCCTCCTGG GGCAGGCATCGTGTGCCGCATAACCAAGCCTGCCCTCCTGG < 41bp 0.480111956456811 0.830662623391542 0.22632784 0.32362947 prediction 0.661325246783085 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:56995986 chr16:56995987 synonymous SNV . 0 22 hPsi_associated_SNPs_26752 0 0 0 0 1 exosome 0.438722761725519 0.438718600789868 0 0 hPsi_site_20476 iPseU_CNN:0;iRNA_PseU:0 20477 chr6 167708073 167708073 1 + G A LIHC 167708072 + 167708052 167708092 41 CCTCTATGGAGGCATGCTCCTGTCCTCCATGTTCCTCCCAC CCTCTATGGAGGCATGCTCCTATCCTCCATGTTCCTCCCAC < 41bp 0.414007047070826 0.830662270031336 0.40322 0.79584754 prediction 0.661324540062671 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167708072 chr6:167708073 synonymous SNV . 0 22 hPsi_associated_SNPs_26753 0 0 0 0 1 cytosol 0.438718592992251 0.438718592994666 0.59169508 0 hPsi_site_20477 iPseU_CNN:0.59169508;iRNA_PseU:0 20478 chr19 44612213 44612213 1 + G A LIHC 44612212 + 44612192 44612232 41 GAGCAGCATGGGAAGAACATTGTACAGAATTCATTCTCTAA GAGCAGCATGGGAAGAACATTATACAGAATTCATTCTCTAA < 41bp 0.450528310488704 0.830659217674987 0.3635022 0.4551035 prediction 0.661318435349975 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612212 chr19:44612213 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26754 0 0 1 0 0 nucleus 0.438091848457887 0.438705772461554 0 0 hPsi_site_20478 iPseU_CNN:0;iRNA_PseU:0 20479 chr22 20939252 20939252 1 + G A OV 20939251 + 20939231 20939271 41 ACCTGTCTTCAACCATTCCCTGTACCGCACATTCGTTCCAG ACCTGTCTTCAACCATTCCCTATACCGCACATTCGTTCCAG < 41bp 0.431083602202047 0.830656370269404 0.3026566 0.7195309 prediction 0.661312740538809 Functional Gain - MED15 ENSG00000099917 CDS Human protein_coding chr22:20939251 chr22:20939252 synonymous SNV . 0 22 hPsi_associated_SNPs_26755 0 0 1 0 1 Cytosol 0.438718659574114 0.438718599404378 0.4390618 0 hPsi_site_20479 iPseU_CNN:0.4390618;iRNA_PseU:0 20480 chr17 37359337 37359337 1 + G A LUSC 37359336 + 37359316 37359356 41 CGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGATCG CGGCTGCTCAGAAGATACCGTAAATCTAAGAAGATCGATCG < 41bp 0.432234866915111 0.830653706401876 0.3467289 0.52956605 prediction 0.661307412803751 Functional Gain - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359336 chr17:37359337 nonsynonymous SNV 0.444 2 22 hPsi_associated_SNPs_26756 0 0 1 0 2 chromatin 0.438720454068726 0.438716404227997 0.0591321 0 hPsi_site_20480 iPseU_CNN:0.0591321;iRNA_PseU:0 20481 chr1 897016 897016 1 + G A BLCA 897015 + 896995 897035 41 CGCTGTCCCCGCAGATGAGATGAGCGAGAGCCGCCAGACCC CGCTGTCCCCGCAGATGAGATAAGCGAGAGCCGCCAGACCC < 41bp 0.427442578584092 0.830651746145665 0.29510987 0.782097 prediction 0.66130349229133 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:897015 chr1:897016 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26757 0 0 1 0 0 Cytosol 0.43871868925854 0.438718655018642 0.564194 0 hPsi_site_20481 iPseU_CNN:0.564194;iRNA_PseU:0 20482 chr6 155561761 155561761 1 + C A UCEC 155561760 + 155561740 155561780 41 ATCAGGATCCTCCTCCGAGGTCTCTGGCCCGCCACCTGTCT ATCAGGATCCTCCTCCGAGGTATCTGGCCCGCCACCTGTCT < 41bp 0.463237609739311 0.830648817341022 0.2798351 0.6991961 prediction 0.661297634682045 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155561760 chr6:155561761 nonsynonymous SNV 0.848 3 22 hPsi_associated_SNPs_26758 0 0 0 0 1 Cytosol 0.43862047004374 0.438712924096661 0.3983922 0 hPsi_site_20482 iPseU_CNN:0.3983922;iRNA_PseU:0 20483 chrX 153047228 153047228 1 + G A rs199626255 153047227 + 153047207 153047247 41 CTTTGTGGCCCTCAAAGTGGTGAAGAGTGCGGGGCATTACA CTTTGTGGCCCTCAAAGTGGTAAAGAGTGCGGGGCATTACA < 41bp 0.412196929035658 0.830648123275042 0.32343525 0.4882938 prediction 0.661296246550084 Functional Gain - SRPK3 ENSG00000184343 CDS Human protein_coding chrX:153047227 chrX:153047228 synonymous SNV . 0 22 hPsi_associated_SNPs_26759 0 0 0 0 2 chromatin 0.438718592995336 0.438718592991408 0 0 hPsi_site_20483 iPseU_CNN:0;iRNA_PseU:0 20484 chr15 79748854 79748854 1 + G A COAD 79748853 + 79748833 79748873 41 AGGAGGCATCCTTTGAATCATGTAGGTCGGACACAGAGATC AGGAGGCATCCTTTGAATCATATAGGTCGGACACAGAGATC < 41bp 0.434381181616214 0.830647826415895 0.29852846 0.5380226 prediction 0.661295652831791 Functional Gain - KIAA1024 ENSG00000169330 CDS Human protein_coding chr15:79748853 chr15:79748854 nonsynonymous SNV 0.013 2 22 hPsi_associated_SNPs_26760 0 0 0 0 0 cytosol 0.438699282800202 0.438597405091558 0.0760452 0 hPsi_site_20484 iPseU_CNN:0.0760452;iRNA_PseU:0 20485 chr17 76236039 76236039 1 + G A rs532980563 76236038 + 76236018 76236058 41 GCCCCTCCGATTTGCAGGGGTGGGGGGCAAGGAGCTGAGCG GCCCCTCCGATTTGCAGGGGTAGGGGGCAAGGAGCTGAGCG < 41bp 0.54917506943433 0.879815825307638 0.26151723 0.31146002 prediction 0.661281511746615 Functional Gain - TMEM235 ENSG00000204278 CDS Human protein_coding chr17:76236038 chr17:76236039 stopgain . 0 22 hPsi_associated_SNPs_26761 0 0 0 0 0 exosome 0.438718592873811 0.438719385201678 0 0 hPsi_site_20485 iPseU_CNN:0;iRNA_PseU:0 20486 chr5 175763732 175763732 1 + C A UCEC 175763731 + 175763711 175763751 41 TTCTCCACACAGAGAAATGTTCTTTACTACCATGGAAAGCC TTCTCCACACAGAGAAATGTTATTTACTACCATGGAAAGCC < 41bp 0.529419375351578 0.860060115065498 0.24003154 0.32815444 prediction 0.661281479427839 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175763731 chr5:175763732 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26762 0 0 0 0 1 chromatin 0.438718592517674 0.438718592574414 0 0 hPsi_site_20486 iPseU_CNN:0;iRNA_PseU:0 20487 chr15 45047218 45047218 1 + C A SKCM 45047217 + 45047197 45047237 41 ACTATGGAGCTACACTGCCCTCTGTGCAATGATTGGTTCCG ACTATGGAGCTACACTGCCCTATGTGCAATGATTGGTTCCG < 41bp 0.533395846853714 0.864036175125629 0.16727293 0.31856847 prediction 0.661280656543831 Functional Gain - TRIM69 ENSG00000185880 CDS Human protein_coding chr15:45047217 chr15:45047218 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_26763 0 0 0 0 0 Ribosome 0.438694497130588 0.438663316284434 0 0 hPsi_site_20487 iPseU_CNN:0;iRNA_PseU:0 20488 chr16 1413011 1413011 1 + G A CESC 1413010 + 1412990 1413030 41 TTTGGCAGAAACTTCCAACTTGGAGCACTTGGGCCACGAGA TTTGGCAGAAACTTCCAACTTAGAGCACTTGGGCCACGAGA < 41bp 0.553874675719181 0.88451424393708 0.39996618 0.67291737 prediction 0.661279136435799 Functional Gain - GNPTG ENSG00000090581 CDS Human protein_coding chr16:1413010 chr16:1413011 synonymous SNV . 0 22 hPsi_associated_SNPs_26764 0 0 1 0 1 Ribosome 0.438718593184762 0.43871859290194 0.34583474 0 hPsi_site_20488 iPseU_CNN:0.34583474;iRNA_PseU:0 20489 chr5 94936688 94936688 1 + G A UCEC 94936687 + 94936667 94936707 41 AGTGAATTCCATGGATGTAATGTGAATGCCTCCACCTACAT AGTGAATTCCATGGATGTAATATGAATGCCTCCACCTACAT < 41bp 0.436273984959858 0.830637908403987 0.3193493 0.30219734 prediction 0.661275816807973 Functional Gain - ARSK ENSG00000164291 CDS Human protein_coding chr5:94936687 chr5:94936688 nonsynonymous SNV 0.968 4 22 hPsi_associated_SNPs_26765 0 0 0 2 1 Ribosome 0.438711957490333 0.438689891981066 0 0 hPsi_site_20489 iPseU_CNN:0;iRNA_PseU:0 20490 chr2 241513201 241513201 1 + G A COAD 241513200 + 241513180 241513220 41 TGCATGCACCAGGAGCCGCGTGTGGGCCGAGCCATGCCTCC TGCATGCACCAGGAGCCGCGTATGGGCCGAGCCATGCCTCC < 41bp 0.563383983236863 0.894020639782291 0.3127876 0.43679583 prediction 0.661273313090855 Functional Gain - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241513200 chr2:241513201 synonymous SNV . 0 22 hPsi_associated_SNPs_26766 0 0 1 0 1 chromatin 0.438718578063199 0.438718444419745 0 0 hPsi_site_20490 iPseU_CNN:0;iRNA_PseU:0 20491 chr14 95057113 95057113 1 + C A UCEC 95057112 + 95057092 95057132 41 CGAGCTTTACCTTCCCAAATTCTCCATTGAGGGCTCCTATC CGAGCTTTACCTTCCCAAATTATCCATTGAGGGCTCCTATC < 41bp 0.525418658354468 0.856054244247586 0.27079266 0.27940667 prediction 0.661271171786236 Functional Gain - SERPINA5 ENSG00000188488 CDS Human protein_coding chr14:95057112 chr14:95057113 nonsynonymous SNV 0.528 2 22 hPsi_associated_SNPs_26767 0 0 1 0 1 cytosol 0.438718592981075 0.438718539849835 0 0 hPsi_site_20491 iPseU_CNN:0;iRNA_PseU:0 20492 chr17 61771015 61771015 1 + C A CESC 61771014 + 61770994 61771034 41 GCCACCCAGCCCACCAATCCTCAGCTGCCCTCCCACATCTC GCCACCCAGCCCACCAATCCTAAGCTGCCCTCCCACATCTC < 41bp 0.533538530943878 0.864170773707326 0.24060765 0.30120757 prediction 0.661264485526897 Functional Gain - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61771014 chr17:61771015 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26768 0 0 1 0 0 Cytosol 0.438968306828149 0.438702771491585 0 0 hPsi_site_20492 iPseU_CNN:0;iRNA_PseU:0 20493 chr1 32745315 32745315 1 + G A LUAD 32745314 + 32745294 32745334 41 GACCCCTTCAGGCATCAAGTTGACCATCAACAAACTCCTGG GACCCCTTCAGGCATCAAGTTAACCATCAACAAACTCCTGG < 41bp 0.429869900505967 0.830630085234864 0.22089347 0.6819457 prediction 0.661260170469729 Functional Gain - LCK ENSG00000182866 CDS Human protein_coding chr1:32745314 chr1:32745315 synonymous SNV . 0 22 hPsi_associated_SNPs_26769 0 0 0 0 2 Cytosol 0.438716047426757 0.438264876237435 0.3638914 0 hPsi_site_20493 iPseU_CNN:0.3638914;iRNA_PseU:0 20494 chr17 21731600 21731600 1 + G A LUAD 21731599 + 21731579 21731619 41 CCTGCACCTGGTCCTGCGCCTGAGGGGTGGCTGTTAATTCT CCTGCACCTGGTCCTGCGCCTAAGGGGTGGCTGTTAATTCT < 41bp 0.447265927474824 0.83062562131301 0.18861213 0.25094557 prediction 0.661251242626021 Functional Gain - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731599 chr17:21731600 synonymous SNV . 0 22 hPsi_associated_SNPs_26770 0 0 1 0 0 Ribosome 0.438718592995102 0.43871859299446 0 0 hPsi_site_20494 iPseU_CNN:0;iRNA_PseU:0 20495 chr1 165532857 165532857 1 + C A COAD 165532856 + 165532836 165532876 41 CCTGGACCACAAAGACTACATCTTCCTGCTGCTCATCGGCT CCTGGACCACAAAGACTACATATTCCTGCTGCTCATCGGCT < 41bp 0.473421416732022 0.830617368235995 0.3219583 0.42750278 prediction 0.66123473647199 Functional Gain - LRRC52 ENSG00000162763 CDS Human protein_coding chr1:165532856 chr1:165532857 synonymous SNV . 0 22 hPsi_associated_SNPs_26771 0 0 0 0 0 unknown 0.438720047410585 0.438718597145185 0 0 hPsi_site_20495 iPseU_CNN:0;iRNA_PseU:0 20496 chr1 248202344 248202344 1 + G A rs6658141 248202343 + 248202323 248202363 41 GCACCCTTTGCTTATACCTATGTACGTCCAAGATCCCTGCG GCACCCTTTGCTTATACCTATATACGTCCAAGATCCCTGCG < 41bp 0.459130803613572 0.830616658395254 0.64490765 0.7753556 prediction 0.661233316790508 Functional Gain - OR2L2 ENSG00000203663 CDS Human protein_coding chr1:248202343 chr1:248202344 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_26772 0 0 0 0 0 exosome 0.438717580160513 0.438717914071857 0.2608959 0 hPsi_site_20496 iPseU_CNN:0.2608959;iRNA_PseU:0 20497 chr2 179238706 179238706 1 + C A READ 179238705 + 179238685 179238725 41 GTCAGAGTCTGTTTCTGAGTTCTTTGATGCCCAAGAGGTGC GTCAGAGTCTGTTTCTGAGTTATTTGATGCCCAAGAGGTGC < 41bp 0.528489806307659 0.859104798365899 0.31518865 0.35791552 prediction 0.661229984116478 Functional Gain - OSBPL6 ENSG00000079156 CDS Human protein_coding chr2:179238705 chr2:179238706 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26773 0 0 0 0 2 Cytosol 0.438852831692601 0.438515614710731 0 0 hPsi_site_20497 iPseU_CNN:0;iRNA_PseU:0 20498 chr8 8869233 8869233 1 + G A UCEC 8869232 + 8869212 8869252 41 GAAATAATTGAATTTCCGGTTGTTTTACTGAATACGCATAC GAAATAATTGAATTTCCGGTTATTTTACTGAATACGCATAC < 41bp 0.443617979209045 0.830611913876398 0.4077355 0.5429516 prediction 0.661223827752796 Functional Gain - ERI1 ENSG00000104626 CDS Human protein_coding chr8:8869232 chr8:8869233 nonsynonymous SNV 0.679 1 22 hPsi_associated_SNPs_26774 0 0 1 0 1 Ribosome 0.438288799007133 0.438186545739783 0.0859032 0 hPsi_site_20498 iPseU_CNN:0.0859032;iRNA_PseU:0 20499 chr2 27460711 27460711 1 + C A UCEC 27460710 + 27460690 27460730 41 GCTTTACCTCAATGAGACCTTCTCTGAGCTGCGGCTGGACA GCTTTACCTCAATGAGACCTTATCTGAGCTGCGGCTGGACA < 41bp 0.470936306512928 0.830609632452177 0.3210333 0.352194 prediction 0.661219264904354 Functional Gain - CAD ENSG00000084774 CDS Human protein_coding chr2:27460710 chr2:27460711 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_26775 0 0 1 0 1 Exosome 0.43870613147679 0.43855644532022 0 0 hPsi_site_20499 iPseU_CNN:0;iRNA_PseU:0 20500 chr1 100358079 100358079 1 + C A UCEC 100358078 + 100358058 100358098 41 AAATTCCCTTCCCTGCCAATTCTTTCACCTGCCCTAATGGA AAATTCCCTTCCCTGCCAATTATTTCACCTGCCCTAATGGA < 41bp 0.518096638677523 0.848703618154579 0.39102563 0.53417426 prediction 0.661213958954112 Functional Gain - AGL ENSG00000162688 CDS Human protein_coding chr1:100358078 chr1:100358079 nonsynonymous SNV 0.113 0 22 hPsi_associated_SNPs_26776 0 0 1 0 2 Cytosol 0.438718592984941 0.438718592956309 0.06834852 0 hPsi_site_20500 iPseU_CNN:0.06834852;iRNA_PseU:0 20501 chr10 75548519 75548519 1 + G A STAD 75548518 + 75548498 75548538 41 GGAGAAAGTTTACCCACCAGTGCCTGAGCAGCTACAGCTCC GGAGAAAGTTTACCCACCAGTACCTGAGCAGCTACAGCTCC < 41bp 0.56549719356376 0.896101960259024 0.167308 0.35850435 prediction 0.661209533390528 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75548518 chr10:75548519 synonymous SNV . 0 22 hPsi_associated_SNPs_26777 0 0 0 0 2 Cytosol 0.438718592396124 0.438718593064306 0 0 hPsi_site_20501 iPseU_CNN:0;iRNA_PseU:0 20502 chr11 61161405 61161405 1 + G A UCEC 61161404 + 61161384 61161424 41 CCTAGTACTGGATGTGGTGATGCTCCTCCTTTATCTTGGAA CCTAGTACTGGATGTGGTGATACTCCTCCTTTATCTTGGAA < 41bp 0.428386414793035 0.830603113980341 0.22808567 0.70019776 prediction 0.661206227960681 Functional Gain - TMEM216 ENSG00000187049 CDS Human protein_coding chr11:61161404 chr11:61161405 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26778 0 0 1 0 2 Ribosome 0.438718592994136 0.438718591529621 0.40039552 0 hPsi_site_20502 iPseU_CNN:0.40039552;iRNA_PseU:0 20503 chr9 131107478 131107478 1 + G A STAD 131107477 + 131107457 131107497 41 TGAAGGCAAAGGTGCGACAGTGCCTGCAGGAGCGGCGGACA TGAAGGCAAAGGTGCGACAGTACCTGCAGGAGCGGCGGACA < 41bp 0.418368340455638 0.830601655002187 0.20202246 0.31178492 prediction 0.661203310004374 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131107477 chr9:131107478 nonsynonymous SNV 0.068 0 22 hPsi_associated_SNPs_26779 0 0 0 0 1 Ribosome 0.438974048903407 0.438651646629685 0 0 hPsi_site_20503 iPseU_CNN:0;iRNA_PseU:0 20504 chr10 85978942 85978942 1 + C A UCEC 85978941 + 85978921 85978961 41 ACATTCCAGCCAGGGTCTGTTCTTGCATCCCCACTGCGAAA ACATTCCAGCCAGGGTCTGTTATTGCATCCCCACTGCGAAA < 41bp 0.50980079913482 0.840402451413428 0.2663582 0.3671195 prediction 0.661203304557216 Functional Gain - CDHR1 ENSG00000148600 CDS Human protein_coding chr10:85978941 chr10:85978942 nonsynonymous SNV 0.015 1 22 hPsi_associated_SNPs_26780 0 0 0 0 0 cytosol 0.438582251460982 0.438666980786014 0 0 hPsi_site_20504 iPseU_CNN:0;iRNA_PseU:0 20505 chr2 48018211 48018211 1 + G A LUSC 48018210 + 48018190 48018230 41 GTTCATGTACAGTTTTTTGATGACAGCCCAACAAGGGGCTG GTTCATGTACAGTTTTTTGATAACAGCCCAACAAGGGGCTG < 41bp 0.423294721476328 0.830595920263826 0.26894832 0.39921564 prediction 0.661191840527652 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48018210 chr2:48018211 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_26781 0 0 1 0 1 Nucleus 0.438718822715851 0.438718597273826 0 0 hPsi_site_20505 iPseU_CNN:0;iRNA_PseU:0 20506 chr9 2718332 2718332 1 + G A SKCM 2718331 + 2718311 2718351 41 GGCTCAAGTACACGCCACGCTGCTGCCGCATCTGCTTCGAG GGCTCAAGTACACGCCACGCTACTGCCGCATCTGCTTCGAG < 41bp 0.561156684915468 0.891747752164632 0.29532194 0.75918317 prediction 0.661182134498327 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718331 chr9:2718332 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_26782 0 0 0 0 0 insoluble cytoplasm 0.438716131023693 0.43839675237188 0.51836634 0 hPsi_site_20506 iPseU_CNN:0.51836634;iRNA_PseU:0 20507 chr11 76825355 76825355 1 + G A LUAD 76825354 + 76825334 76825374 41 GCACTGGTGGACTTCACGGGTGGTGTTTCTGAGCCCATCGA GCACTGGTGGACTTCACGGGTAGTGTTTCTGAGCCCATCGA < 41bp 0.41155500684113 0.830586967383063 0.44311368 0.5611516 prediction 0.661173934766127 Functional Gain - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76825354 chr11:76825355 nonsynonymous SNV 0.663 5 22 hPsi_associated_SNPs_26783 0 0 0 0 1 Endoplasmic reticulum 0.438718591638085 0.43876735019719 0.1223032 0 hPsi_site_20507 iPseU_CNN:0.1223032;iRNA_PseU:0 20508 chr7 73511476 73511476 1 + G A CESC 73511475 + 73511455 73511495 41 ACGTGTGGGACCTTTATCGGTGACGGGGACACCTACACGCT ACGTGTGGGACCTTTATCGGTAACGGGGACACCTACACGCT < 41bp 0.562313134154342 0.892899588277852 0.6584703 0.9602445 prediction 0.66117290824702 Functional Gain - LIMK1 ENSG00000106683 CDS Human protein_coding chr7:73511475 chr7:73511476 nonsynonymous SNV 0.653 4 22 hPsi_associated_SNPs_26784 0 0 1 0 1 Ribosome 0.438716540025794 0.438718599045038 0.6035484 0 hPsi_site_20508 iPseU_CNN:0.6035484;iRNA_PseU:0 20509 chr15 91498124 91498124 1 + G A rs189310533 91498123 + 91498103 91498143 41 AGGTAAAAGCTGCTTCCTGTTGGGGCATGAGTCCGGCGCGT AGGTAAAAGCTGCTTCCTGTTAGGGCATGAGTCCGGCGCGT < 41bp 0.562733628464692 0.893319018433192 0.60955054 0.90558267 prediction 0.661170779936999 Functional Gain - RCCD1 ENSG00000258384 ncRNA_exonic Human antisense chr15:91498123 chr15:91498124 . . 0 22 hPsi_associated_SNPs_26785 0 0 0 0 1 Ribosome 0.43871851825864 0.438308323756004 0.59206426 0 hPsi_site_20509 iPseU_CNN:0.59206426;iRNA_PseU:0 20510 chr8 143927958 143927958 1 + G A GBM 143927957 + 143927937 143927977 41 GTTGTTGTAATAGCATGGTTTGCAATGCAGGAGGACCTACT GTTGTTGTAATAGCATGGTTTACAATGCAGGAGGACCTACT < 41bp 0.441584754686303 0.830582807992147 0.26877737 0.39311454 prediction 0.661165615984295 Functional Gain - GML ENSG00000104499 CDS Human protein_coding chr8:143927957 chr8:143927958 nonsynonymous SNV 0.286 5 22 hPsi_associated_SNPs_26786 0 0 0 0 0 unknown 0.438712825804001 0.438718527452577 0 0 hPsi_site_20510 iPseU_CNN:0;iRNA_PseU:0 20511 chr15 49926748 49926748 1 + C A BLCA 49926747 + 49926727 49926767 41 TTTTAGGTTGCACTCATTTTTCCTGGACCTCAGTCTATCTC TTTTAGGTTGCACTCATTTTTACTGGACCTCAGTCTATCTC < 41bp 0.526372185239685 0.856954254961146 0.28579688 0.45671028 prediction 0.661164139442923 Functional Gain - DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49926747 chr15:49926748 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_26787 0 0 1 0 1 Cytosol 0.438718966771081 0.438716637170166 0 0 hPsi_site_20511 iPseU_CNN:0;iRNA_PseU:0 20512 chr7 87514427 87514427 1 + C A UCEC 87514426 + 87514406 87514446 41 CATATACTGCAGAAACCACTTCACCTCATCCCAGCCATGAT CATATACTGCAGAAACCACTTAACCTCATCCCAGCCATGAT < 41bp 0.529904429483855 0.860475098618123 0.21733904 0.31488737 prediction 0.661141338268536 Functional Gain - DBF4 ENSG00000006634 CDS Human protein_coding chr7:87514426 chr7:87514427 stopgain 1.000 1 22 hPsi_associated_SNPs_26788 0 0 1 0 1 chromatin 0.438650567791057 0.438711130408553 0 0 hPsi_site_20512 iPseU_CNN:0;iRNA_PseU:0 20513 chr17 43180372 43180372 1 + G T OV 43180371 + 43180351 43180391 41 AACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGT AACAAAGGACATTCCAGTAGTTCACCAGCTCCTCACCAGGT < 41bp 0.514478609306628 0.845048190861723 0.2502771 0.28698704 prediction 0.661139163110191 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43180371 chr17:43180372 synonymous SNV . 0 22 hPsi_associated_SNPs_26789 0 0 1 0 0 Ribosome 0.438964264204221 0.438690504302149 0 0 hPsi_site_20513 iPseU_CNN:0;iRNA_PseU:0 20514 chr16 21261292 21261292 1 + G A SKCM 21261291 + 21261271 21261311 41 CCCCAAGAAGGTCACCAGGCTGAAGGAGCAGGCTCAGAAGA CCCCAAGAAGGTCACCAGGCTAAAGGAGCAGGCTCAGAAGA < 41bp 0.423050068340495 0.830565144485058 0.33669478 0.6631105 prediction 0.661130288970115 Functional Gain - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21261291 chr16:21261292 synonymous SNV . 0 22 hPsi_associated_SNPs_26790 0 0 0 0 0 exosome 0.438718592994977 0.438718592994312 0.326221 0 hPsi_site_20514 iPseU_CNN:0.326221;iRNA_PseU:0 20515 chr11 73103419 73103419 1 + G T LUAD 73103418 + 73103398 73103438 41 TGTCTTCTGCCTCATGGGGCTGTTGGGCATCCTGGTGTGCA TGTCTTCTGCCTCATGGGGCTTTTGGGCATCCTGGTGTGCA < 41bp 0.49567687887565 0.83056287680848 0.3373036 0.3826401 prediction 0.661125753616959 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73103418 chr11:73103419 synonymous SNV . 0 22 hPsi_associated_SNPs_26791 0 0 1 0 1 chromatin 0.438716966678744 0.438691050755339 0 0 hPsi_site_20515 iPseU_CNN:0;iRNA_PseU:0 20516 chr3 50220097 50220097 1 + G A COAD 50220096 + 50220076 50220116 41 GACCCGTCGTTCATCCATGCTGAGCTCATTCCTGACAGTGC GACCCGTCGTTCATCCATGCTAAGCTCATTCCTGACAGTGC < 41bp 0.409687021074349 0.830562277153252 0.31385827 0.7082597 prediction 0.661124554306504 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50220096 chr3:50220097 nonsynonymous SNV 0.990 1 22 hPsi_associated_SNPs_26792 0 0 0 0 1 Endoplasmic reticulum 0.444007950746429 0.43972523015388 0.4165194 0 hPsi_site_20516 iPseU_CNN:0.4165194;iRNA_PseU:0 20517 chr14 95030335 95030335 1 + C A UCEC 95030334 + 95030314 95030354 41 TAAACTCTTCCACACCAACTTCTACGACACTGTGGGCACAA TAAACTCTTCCACACCAACTTATACGACACTGTGGGCACAA < 41bp 0.531913975558871 0.862474941911695 0.6340562 0.7893271 prediction 0.661121932705648 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030334 chr14:95030335 nonsynonymous SNV 0.088 4 22 hPsi_associated_SNPs_26793 0 0 0 0 0 exosome 0.438718248772409 0.437861407784491 0.3105418 0 hPsi_site_20517 iPseU_CNN:0.3105418;iRNA_PseU:0 20518 chr12 120067653 120067653 1 + C A COAD 120067652 + 120067632 120067672 41 GCCTTCTCATCATCGGCATTTCTTGTGCAGTTCACTTCACA GCCTTCTCATCATCGGCATTTATTGTGCAGTTCACTTCACA < 41bp 0.521879102235576 0.85243863805438 0.32498363 0.68076426 prediction 0.661119071637609 Functional Gain - TMEM233 ENSG00000224982 CDS Human protein_coding chr12:120067652 chr12:120067653 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26794 0 0 0 0 1 exosome 0.438719809320988 0.438653875283128 0.36152852 0 hPsi_site_20518 iPseU_CNN:0.36152852;iRNA_PseU:0 20519 chr12 71977498 71977498 1 + C A UCEC 71977497 + 71977477 71977517 41 GGAGTGTGGACCATAGCAGTTCTGGCACTTACTTGTAATGC GGAGTGTGGACCATAGCAGTTATGGCACTTACTTGTAATGC < 41bp 0.526867659463433 0.85742474313333 0.13986617 0.2079958 prediction 0.661114167339794 Functional Gain - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977497 chr12:71977498 nonsynonymous SNV 0.150 5 22 hPsi_associated_SNPs_26795 0 0 1 0 1 Nucleus 0.438719039909735 0.438717223421029 0 0 hPsi_site_20519 iPseU_CNN:0;iRNA_PseU:0 20520 chr14 24527205 24527205 1 + C A UCEC 24527204 + 24527184 24527224 41 CCCGCCGGCCTTCAAGCAGTTCTTCAGCAGCGCCTACACAC CCCGCCGGCCTTCAAGCAGTTATTCAGCAGCGCCTACACAC < 41bp 0.542272134675546 0.872826953038244 0.5358772 0.9031218 prediction 0.661109636725395 Functional Gain - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24527204 chr14:24527205 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26796 0 0 0 0 2 Endoplasmic reticulum 0.438717617592319 0.438718411389221 0.7344892 0 hPsi_site_20520 iPseU_CNN:0.7344892;iRNA_PseU:0 20521 chr11 68153929 68153929 1 + C A COAD 68153928 + 68153908 68153948 41 CGACCCGCTAGAGGGCTATGTCTACTGGACAGATGACGAGG CGACCCGCTAGAGGGCTATGTATACTGGACAGATGACGAGG < 41bp 0.529635483214232 0.860188835054967 0.2600473 0.34721234 prediction 0.661106703681469 Functional Gain - LRP5 ENSG00000162337 CDS Human protein_coding chr11:68153928 chr11:68153929 synonymous SNV . 0 22 hPsi_associated_SNPs_26797 0 0 1 0 0 Endoplasmic reticulum 0.438756122581937 0.438834742491532 0 0 hPsi_site_20521 iPseU_CNN:0;iRNA_PseU:0 20522 chr20 44644965 44644965 1 + G A rs13925 44644964 + 44644944 44644984 41 GTTGAACCAGGTGGACCAAGTGGGCTACGTGACCTATGACA GTTGAACCAGGTGGACCAAGTAGGCTACGTGACCTATGACA < 41bp 0.436219244014257 0.830550115022137 0.25016028 0.5685443 prediction 0.661100230044275 Functional Gain - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44644964 chr20:44644965 synonymous SNV . 0 22 hPsi_associated_SNPs_26798 1 0 0 0 1 Endoplasmic reticulum 0.438718538323723 0.438656424512775 0.1370886 0 hPsi_site_20522 iPseU_CNN:0.1370886;iRNA_PseU:0 20523 chr3 41266924 41266924 1 + G A UCEC 41266923 + 41266903 41266943 41 CCTCAGATGGTGTCTGCTATTGTACGTACCATGCAGAATAC CCTCAGATGGTGTCTGCTATTATACGTACCATGCAGAATAC < 41bp 0.424527392323991 0.830545332200948 0.37730128 0.6337991 prediction 0.661090664401895 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266923 chr3:41266924 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26799 0 0 1 0 1 Nucleus 0.434275953695183 0.433262378465539 0.2675982 0 hPsi_site_20523 iPseU_CNN:0.2675982;iRNA_PseU:0 20524 chrX 101970706 101970706 1 + G A UCEC 101970705 + 101970685 101970725 41 TGGAGAAAATACCAATAACTTGTTCAGGCCCAGAGTCAGGG TGGAGAAAATACCAATAACTTATTCAGGCCCAGAGTCAGGG < 41bp 0.423166354946592 0.830542165751565 0.18065664 0.24518418 prediction 0.661084331503129 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101970705 chrX:101970706 synonymous SNV . 0 22 hPsi_associated_SNPs_26800 0 0 0 0 0 unknown 0.43872353792429 0.438720255669701 0 0 hPsi_site_20524 iPseU_CNN:0;iRNA_PseU:0 20525 chr1 35260294 35260294 1 + C A UCEC 35260293 + 35260273 35260313 41 CACCTATGTCGCCAGTGTGCTCTGCAAGAGTGTGCTAGAGG CACCTATGTCGCCAGTGTGCTATGCAAGAGTGTGCTAGAGG < 41bp 0.52893097918977 0.859469355948961 0.27637613 0.3650427 prediction 0.661076753518382 Functional Gain - GJA4 ENSG00000187513 CDS Human protein_coding chr1:35260293 chr1:35260294 synonymous SNV . 0 22 hPsi_associated_SNPs_26801 0 0 0 0 0 cytosol 0.439652741550688 0.438688597871841 0 0 hPsi_site_20525 iPseU_CNN:0;iRNA_PseU:0 20526 chr3 52570891 52570891 1 + G A UCEC 52570890 + 52570870 52570910 41 AGGAACGATGGAGTGGATCATGATTAAAGTGCGCGTGGGCC AGGAACGATGGAGTGGATCATAATTAAAGTGCGCGTGGGCC < 41bp 0.443085951057005 0.830536994265267 0.17967987 0.3219894 prediction 0.661073988530533 Functional Gain - SMIM4 ENSG00000168273 CDS Human protein_coding chr3:52570890 chr3:52570891 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26802 0 0 1 0 1 Ribosome 0.438718451490936 0.438718601157167 0 0 hPsi_site_20526 iPseU_CNN:0;iRNA_PseU:0 20527 chr7 105660955 105660955 1 + C A LUSC 105660954 + 105660934 105660974 41 TGACATGTACCGACCTTGATTCCAGCCCCAGATCTTTCCGT TGACATGTACCGACCTTGATTACAGCCCCAGATCTTTCCGT < 41bp 0.477623712824939 0.830532369624889 0.564803 0.71898574 prediction 0.661064739249778 Functional Gain - CDHR3 ENSG00000128536 CDS Human protein_coding chr7:105660954 chr7:105660955 nonsynonymous SNV 0.945 4 22 hPsi_associated_SNPs_26803 0 0 0 0 1 cytosol 0.438709595983231 0.43871850257217 0.30836548 0 hPsi_site_20527 iPseU_CNN:0.30836548;iRNA_PseU:0 20528 chr15 49917503 49917503 1 + C A COAD 49917502 + 49917482 49917522 41 TGTTTAGCATCTCAAGAAGTTCTTCAAAAAGCTCAGCAAAG TGTTTAGCATCTCAAGAAGTTATTCAAAAAGCTCAGCAAAG < 41bp 0.520966611115907 0.851495251502584 0.30459562 0.77399534 prediction 0.661057280773354 Functional Gain - DTWD1 ENSG00000104047 CDS Human protein_coding chr15:49917502 chr15:49917503 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_26804 0 0 0 2 0 Cytosol 0.438610161953858 0.438694291450908 0.54799068 0 hPsi_site_20528 iPseU_CNN:0.54799068;iRNA_PseU:0 20529 chr1 35250921 35250921 1 + C A UCEC 35250920 + 35250900 35250940 41 CCGACCTACCGAGAAGAAAATCTTCACCTACTTCATGGTGG CCGACCTACCGAGAAGAAAATATTCACCTACTTCATGGTGG < 41bp 0.522676189139612 0.853203039163537 0.33313838 0.38406673 prediction 0.66105370004785 Functional Gain - GJB3 ENSG00000188910 CDS Human protein_coding chr1:35250920 chr1:35250921 synonymous SNV . 0 22 hPsi_associated_SNPs_26805 0 0 1 0 0 Ribosome 0.438681307199293 0.438723314819954 0 0 hPsi_site_20529 iPseU_CNN:0;iRNA_PseU:0 20530 chr10 18242353 18242353 1 + C A COAD 18242352 + 18242332 18242372 41 CCGGCAGACCTGCTACAGGTTCTCTCTGCTGGTGACCACCC CCGGCAGACCTGCTACAGGTTATCTCTGCTGGTGACCACCC < 41bp 0.535558904601232 0.866085740834271 0.44626883 0.7106542 prediction 0.661053672466078 Functional Gain - SLC39A12 ENSG00000148482 CDS Human protein_coding chr10:18242352 chr10:18242353 nonsynonymous SNV 0.550 0 22 hPsi_associated_SNPs_26806 0 0 0 0 0 exosome 0.438717773574104 0.438653817677281 0.4213084 0 hPsi_site_20530 iPseU_CNN:0.4213084;iRNA_PseU:0 20531 chr3 28454676 28454676 1 + G A SKCM 28454675 + 28454655 28454695 41 ATGTGAGAATGAAAATTGTTTGAAATGGAGATTGTTATCAA ATGTGAGAATGAAAATTGTTTAAAATGGAGATTGTTATCAA < 41bp 0.452961260112609 0.830518761355003 0.2672754 0.34935135 prediction 0.661037522710006 Functional Gain - ZCWPW2 ENSG00000206559 CDS Human protein_coding chr3:28454675 chr3:28454676 synonymous SNV . 0 22 hPsi_associated_SNPs_26807 0 0 1 0 0 nucleus 0.438500869172023 0.439374118437542 0 0 hPsi_site_20531 iPseU_CNN:0;iRNA_PseU:0 20532 chr14 20216402 20216402 1 + C A UCEC 20216401 + 20216381 20216421 41 CTTCTCTGTGGATAAGATATTCTCCTTGTTTTACACAGTGA CTTCTCTGTGGATAAGATATTATCCTTGTTTTACACAGTGA < 41bp 0.503233414716842 0.833751567580407 0.34792247 0.466069 prediction 0.66103630572713 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216401 chr14:20216402 nonsynonymous SNV 0.791 0 22 hPsi_associated_SNPs_26808 0 0 0 0 0 unknown 0.4386207499356 0.438714556422507 0 0 hPsi_site_20532 iPseU_CNN:0;iRNA_PseU:0 20533 chr11 120186086 120186086 1 + C A UCEC 120186085 + 120186065 120186105 41 TTCAGGTATCTCCCTCAGGGTCTCTGGGCCCCCTCTCTGTC TTCAGGTATCTCCCTCAGGGTATCTGGGCCCCCTCTCTGTC < 41bp 0.544999377178295 0.875512624831815 0.36723804 0.7911234 prediction 0.66102649530704 Functional Gain - POU2F3 ENSG00000137709 CDS Human protein_coding chr11:120186085 chr11:120186086 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_26809 0 0 0 0 2 Nucleus 0.438718592995101 0.438718592996147 0.5822468 0 hPsi_site_20533 iPseU_CNN:0.5822468;iRNA_PseU:0 20534 chr11 34472635 34472635 1 + C A UCEC 34472634 + 34472614 34472654 41 GACTCCCATCGCAGTTCGGTTCTCCACTGTTGGTAAGTTGG GACTCCCATCGCAGTTCGGTTATCCACTGTTGGTAAGTTGG < 41bp 0.52609897312133 0.856610748248619 0.56278175 0.7321365 prediction 0.661023550254578 Functional Gain - CAT ENSG00000121691 CDS Human protein_coding chr11:34472634 chr11:34472635 nonsynonymous SNV 0.963 3 22 hPsi_associated_SNPs_26810 0 0 1 0 1 Ribosome 0.438718593011083 0.438718592998126 0.3387095 0 hPsi_site_20534 iPseU_CNN:0.3387095;iRNA_PseU:0 20535 chr9 132642471 132642471 1 + C A UCEC 132642470 + 132642450 132642490 41 AGGTGGCCCCGAGATTGCCATCCGCCAGAGTGTGGCGCAGC AGGTGGCCCCGAGATTGCCATACGCCAGAGTGTGGCGCAGC < 41bp 0.524485948610984 0.854994242779792 0.33622244 0.7020981 prediction 0.661016588337617 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132642470 chr9:132642471 synonymous SNV . 0 22 hPsi_associated_SNPs_26811 0 0 1 0 2 chromatin 0.438719516260422 0.438718422001748 0.4041962 0 hPsi_site_20535 iPseU_CNN:0.4041962;iRNA_PseU:0 20536 chr11 70007338 70007338 1 + G T HNSC 70007337 + 70007317 70007357 41 CATGGCCGCCGCCTTGGCCATGAACTCCTCCCCCTCCGTGC CATGGCCGCCGCCTTGGCCATTAACTCCTCCCCCTCCGTGC < 41bp 0.507436332867284 0.837942393414372 0.30877763 0.34434903 prediction 0.661012121094175 Functional Gain - ANO1 ENSG00000131620 CDS Human protein_coding chr11:70007337 chr11:70007338 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_26812 0 0 0 0 1 Cytosol 0.438722252721546 0.43871865356221 0 0 hPsi_site_20536 iPseU_CNN:0;iRNA_PseU:0 20537 chr2 11273597 11273597 1 + G A PAAD 11273596 + 11273576 11273616 41 GCAGGGGTCTTGCTGGTGGCTGCCAGGCCCCCCAGGCTCTG GCAGGGGTCTTGCTGGTGGCTACCAGGCCCCCCAGGCTCTG < 41bp 0.442680597897896 0.830502799333945 0.24238783 0.45222205 prediction 0.661005598667891 Functional Gain - C2orf50 ENSG00000150873 CDS Human protein_coding chr2:11273596 chr2:11273597 nonsynonymous SNV 0.136 0 22 hPsi_associated_SNPs_26813 0 0 0 0 0 Nucleus 0.438718632233841 0.438718592286384 0 0 hPsi_site_20537 iPseU_CNN:0;iRNA_PseU:0 20538 chr2 44078937 44078937 1 + C A UCEC 44078936 + 44078916 44078956 41 GATGCGGCTGCCCAGAACCTTCTCCCAGGCCCAGCGTGACA GATGCGGCTGCCCAGAACCTTATCCCAGGCCCAGCGTGACA < 41bp 0.457776952326846 0.8305015419377 0.3249908 0.42152724 prediction 0.661003083875401 Functional Gain - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44078936 chr2:44078937 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26814 0 0 1 0 0 cytosol 0.438632565469549 0.440388923958206 0 0 hPsi_site_20538 iPseU_CNN:0;iRNA_PseU:0 20539 chr14 21469246 21469246 1 + C A UCEC 21469245 + 21469225 21469265 41 AGAATGGGGTGGGGCTCATATCTTCGAACTCCACAGCCATG AGAATGGGGTGGGGCTCATATATTCGAACTCCACAGCCATG < 41bp 0.53267415226272 0.863165281644571 0.34149146 0.5172717 prediction 0.660982258763701 Functional Gain - SLC39A2 ENSG00000165794 CDS Human protein_coding chr14:21469245 chr14:21469246 synonymous SNV . 0 22 hPsi_associated_SNPs_26815 0 0 0 0 0 exosome 0.438716443215412 0.438717029903144 0.0345434 0 hPsi_site_20539 iPseU_CNN:0.0345434;iRNA_PseU:0 20540 chr10 101464399 101464399 1 + G A BLCA 101464398 + 101464378 101464418 41 CCATTGGACTTGCTGTGGCTTGAAGAGGTGGTGCCCATGAT CCATTGGACTTGCTGTGGCTTAAAGAGGTGGTGCCCATGAT < 41bp 0.433920832228195 0.830489019266863 0.28751656 0.37165976 prediction 0.660978038533727 Functional Gain - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101464398 chr10:101464399 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_26816 0 0 1 0 0 Endoplasmic reticulum 0.438791641198325 0.438719366538497 0 0 hPsi_site_20540 iPseU_CNN:0;iRNA_PseU:0 20541 chr19 2994037 2994037 1 + G A SKCM 2994036 + 2994016 2994056 41 GGCCAGTGGTGGGCAAGCGTTGGAATGGACGACTTCCTTGG GGCCAGTGGTGGGCAAGCGTTAGAATGGACGACTTCCTTGG < 41bp 0.573612665787053 0.904093283880662 0.3894018 0.6803848 prediction 0.660961236187218 Functional Gain - TLE6 ENSG00000104953 CDS Human protein_coding chr19:2994036 chr19:2994037 nonsynonymous SNV 0.034 3 22 hPsi_associated_SNPs_26817 0 0 0 0 2 exosome 0.438718592995125 0.438718592048539 0.3607696 0 hPsi_site_20541 iPseU_CNN:0.3607696;iRNA_PseU:0 20542 chrX 3002513 3002513 1 + C A rs145640489 3002512 + 3002492 3002532 41 TGGGAAGCTGAGCGGCTGGGTCTCTGTTCCCTGGCTCCTGA TGGGAAGCTGAGCGGCTGGGTATCTGTTCCCTGGCTCCTGA < 41bp 0.463878885651823 0.830475975609039 0.38820195 0.74269867 prediction 0.660951951218077 Functional Gain - ARSF ENSG00000062096 CDS Human protein_coding chrX:3002512 chrX:3002513 synonymous SNV . 0 22 hPsi_associated_SNPs_26818 0 0 0 0 0 unknown 0.438682083090964 0.440783821218721 0.48539734 0 hPsi_site_20542 iPseU_CNN:0.48539734;iRNA_PseU:0 20543 chr10 103900979 103900979 1 + C A GBM 103900978 + 103900958 103900998 41 AGCCTCCTAGTCTTCCATTGTCTATGGGGCCAGTACTACCT AGCCTCCTAGTCTTCCATTGTATATGGGGCCAGTACTACCT < 41bp 0.481286659272341 0.830468925635532 0.29588038 0.3287303 prediction 0.660937851271064 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900978 chr10:103900979 nonsynonymous SNV 0.010 2 22 hPsi_associated_SNPs_26819 0 0 1 0 0 Cytosol 0.438718592995104 0.438718708214506 0 0 hPsi_site_20543 iPseU_CNN:0;iRNA_PseU:0 20544 chr19 56909686 56909686 1 + G A rs8110200 56909685 + 56909665 56909705 41 GGGCCATGTTGTATGTTCCTTGCTGTACACGTGGTTGACAA GGGCCATGTTGTATGTTCCTTACTGTACACGTGGTTGACAA < 41bp 0.463120623401651 0.830465664387651 0.26958156 0.48361215 prediction 0.660931328775303 Functional Gain - ZNF582-AS1 ENSG00000267454 ncRNA_exonic Human lincRNA chr19:56909685 chr19:56909686 . . 0 22 hPsi_associated_SNPs_26820 0 0 1 0 2 unknown 0.438490127191422 0.438660368985818 0 0 hPsi_site_20544 iPseU_CNN:0;iRNA_PseU:0 20545 chr10 103908645 103908645 1 + C A COAD 103908644 + 103908624 103908664 41 ATCAGAGCTGAAACAGAGGTTCTCCGTTTTTGGAGAGATTG ATCAGAGCTGAAACAGAGGTTATCCGTTTTTGGAGAGATTG < 41bp 0.532003386307293 0.862467295710549 0.33746457 0.35613003 prediction 0.660927818806512 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908644 chr10:103908645 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_26821 0 0 1 0 1 Cytosol 0.438718944551171 0.438722414259089 0 0 hPsi_site_20545 iPseU_CNN:0;iRNA_PseU:0 Heel bone mineral density 20546 chr5 133477951 133477951 1 + G A rs34995273 133477950 + 133477930 133477970 41 CATCCCCCACCCGGCCATTGTGCCCCCCTCAGGGAAGCAGG CATCCCCCACCCGGCCATTGTACCCCCCTCAGGGAAGCAGG < 41bp 0.411829094289292 0.830452875143249 0.30062568 0.4880164 prediction 0.660905750286498 Functional Gain - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133477950 chr5:133477951 synonymous SNV . 0 22 hPsi_associated_SNPs_26822 0 0 1 0 2 Cytosol 0.438718592793947 0.438718578046605 0 0 hPsi_site_20546 iPseU_CNN:0;iRNA_PseU:0 20547 chr8 120431546 120431546 1 + G A LUSC 120431545 + 120431525 120431565 41 ACAGACTCGGCTCTGCATGGTGCGGCCCTGTGAACAAGAGC ACAGACTCGGCTCTGCATGGTACGGCCCTGTGAACAAGAGC < 41bp 0.569527823552336 0.899973222692077 0.51132786 0.9047245 prediction 0.660890798279483 Functional Gain - NOV ENSG00000136999 CDS Human protein_coding chr8:120431545 chr8:120431546 synonymous SNV . 0 22 hPsi_associated_SNPs_26823 0 0 0 0 1 exosome 0.438799884285245 0.439156683517919 0.78679328 0 hPsi_site_20547 iPseU_CNN:0.78679328;iRNA_PseU:0 20548 chr17 76212803 76212803 1 + G A BLCA 76212802 + 76212782 76212822 41 CTTTCTGTCAAGAAGCAGTTTGAAGAATTAACCCTTGGTGA CTTTCTGTCAAGAAGCAGTTTAAAGAATTAACCCTTGGTGA < 41bp 0.443353817264115 0.830435315237395 0.25975427 0.44417128 prediction 0.66087063047479 Functional Gain - BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76212802 chr17:76212803 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26824 0 0 1 2 2 Ribosome 0.4385589730687 0.438766487481917 0 0 hPsi_site_20548 iPseU_CNN:0;iRNA_PseU:0 20549 chr2 231109759 231109759 1 + G A STAD 231109758 + 231109738 231109778 41 CCAAAGGCTGGTGGAGGAGATGCTGAAGATGCACCCAGCCT CCAAAGGCTGGTGGAGGAGATACTGAAGATGCACCCAGCCT < 41bp 0.427215305631175 0.830433668908463 0.2985382 0.6678456 prediction 0.660867337816925 Functional Gain - SP140 ENSG00000079263 CDS Human protein_coding chr2:231109758 chr2:231109759 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26825 0 0 0 0 3 exosome 0.445828673987647 0.439134097996367 0.3356912 0 hPsi_site_20549 iPseU_CNN:0.3356912;iRNA_PseU:0 20550 chr19 48511972 48511972 1 + C A UCEC 48511971 + 48511951 48511991 41 GGGATGGACAACCTTCCTTCTCTATTCCTATGAGTCAAGTG GGGATGGACAACCTTCCTTCTATATTCCTATGAGTCAAGTG < 41bp 0.475246591841626 0.830433083861965 0.28661358 0.26986223 prediction 0.66086616772393 Functional Gain - ELSPBP1 ENSG00000169393 CDS Human protein_coding chr19:48511971 chr19:48511972 synonymous SNV . 0 22 hPsi_associated_SNPs_26826 0 0 0 0 2 unknown 0.43719297356105 0.438867864238026 0 0 hPsi_site_20550 iPseU_CNN:0;iRNA_PseU:0 20551 chr11 5664631 5664631 1 + C A UCEC 5664630 + 5664610 5664650 41 AGATGTGCAAATCGTCAAAATCTTTACACCAAATACAGACC AGATGTGCAAATCGTCAAAATATTTACACCAAATACAGACC < 41bp 0.51818807004475 0.848620429293618 0.18818375 0.31941953 prediction 0.660864718497737 Functional Gain - TRIM34;TRIM6-TRIM34 ENSG00000258588;ENSG00000258659 CDS Human other chr11:5664630 chr11:5664631 nonsynonymous SNV 0.035 0 22 hPsi_associated_SNPs_26827 0 0 0 0 0 unknown 0.438730084127764 0.438719985552945 0 0 hPsi_site_20551 iPseU_CNN:0;iRNA_PseU:0 20552 chr10 50870818 50870818 1 + C A LUSC 50870817 + 50870797 50870837 41 TGAGCAACCGGTTTGTCCTCTCCACTAGCCAGGTACGGCCC TGAGCAACCGGTTTGTCCTCTACACTAGCCAGGTACGGCCC < 41bp 0.53813197165456 0.868558882110727 0.30245417 0.59240246 prediction 0.660853820912335 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50870817 chr10:50870818 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26828 0 0 0 0 1 unknown 0.438718644746324 0.438728515767033 0.18480492 0 hPsi_site_20552 iPseU_CNN:0.18480492;iRNA_PseU:0 20553 chr19 1917727 1917727 1 + C A GBM 1917726 + 1917706 1917746 41 CTTCCCGCCACTGCCCAAGTTCATCCCTGTGAAGCCCTGCT CTTCCCGCCACTGCCCAAGTTAATCCCTGTGAAGCCCTGCT < 41bp 0.534891183309551 0.865314378553769 0.37200478 0.5580052 prediction 0.660846390488435 Functional Gain - SCAMP4 ENSG00000227500 CDS Human protein_coding chr19:1917726 chr19:1917727 nonsynonymous SNV 0.038 0 22 hPsi_associated_SNPs_26829 0 0 1 0 2 Ribosome 0.438718592993625 0.438718592995102 0.1160104 0 hPsi_site_20553 iPseU_CNN:0.1160104;iRNA_PseU:0 20554 chr17 59556001 59556001 1 + C A UCEC 59556000 + 59555980 59556020 41 TCTTCCAGATCATCCTCAACTCTATGCACAAGTACCAGCCG TCTTCCAGATCATCCTCAACTATATGCACAAGTACCAGCCG < 41bp 0.4631569820013 0.830422482263897 0.3020568 0.36702275 prediction 0.660844964527795 Functional Gain - TBX4 ENSG00000121075 CDS Human protein_coding chr17:59556000 chr17:59556001 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_26830 0 0 0 0 1 exosome 0.438734723161714 0.439399196139837 0 0 hPsi_site_20554 iPseU_CNN:0;iRNA_PseU:0 20555 chr10 126631682 126631682 1 + G A CESC 126631681 + 126631661 126631701 41 GAGCTCGATGGAGGGGAAGTTGCAGTAGTGGTAATAGCCAA GAGCTCGATGGAGGGGAAGTTACAGTAGTGGTAATAGCCAA < 41bp 0.555480038059345 0.885901697388353 0.39220208 0.7033576 prediction 0.660843318658017 Functional Gain - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126631681 chr10:126631682 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26831 0 0 1 0 0 Ribosome 0.438718608789031 0.438718592997696 0.4067152 0 hPsi_site_20555 iPseU_CNN:0.4067152;iRNA_PseU:0 20556 chr1 22150649 22150649 1 + G A LUSC 22150648 + 22150628 22150668 41 CCGGTGCCACTCGCCGTCATTGATGGGGTCCTCAGAGACCA CCGGTGCCACTCGCCGTCATTAATGGGGTCCTCAGAGACCA < 41bp 0.540787103744071 0.871205645089134 0.30020756 0.37717545 prediction 0.660837082690128 Functional Gain - HSPG2 ENSG00000142798 CDS Human protein_coding chr1:22150648 chr1:22150649 synonymous SNV . 0 22 hPsi_associated_SNPs_26832 0 0 0 0 0 Endoplasmic reticulum 0.44270263114596 0.441777135633969 0 0 hPsi_site_20556 iPseU_CNN:0;iRNA_PseU:0 20557 chr1 162741929 162741929 1 + G T LUAD 162741928 + 162741908 162741948 41 AGGAGGCAACACATACTCAGTGCCTGCCGTCACCATGGACC AGGAGGCAACACATACTCAGTTCCTGCCGTCACCATGGACC < 41bp 0.507622981240289 0.838037504193171 0.25277895 0.35763535 prediction 0.660829045905764 Functional Gain - DDR2 ENSG00000162733 CDS Human protein_coding chr1:162741928 chr1:162741929 synonymous SNV . 0 22 hPsi_associated_SNPs_26833 0 0 0 0 0 nucleolus 0.438712884313004 0.438723311131243 0 0 hPsi_site_20557 iPseU_CNN:0;iRNA_PseU:0 20558 chr5 63905053 63905053 1 + G A SKCM 63905052 + 63905032 63905072 41 AGACGGAAGAGAAGGTTCTTTGGGCTGTGTTGTCTCATCTC AGACGGAAGAGAAGGTTCTTTAGGCTGTGTTGTCTCATCTC < 41bp 0.445436286276535 0.830410076281284 0.25738457 0.65995526 prediction 0.660820152562569 Functional Gain - RGS7BP ENSG00000186479 CDS Human protein_coding chr5:63905052 chr5:63905053 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_26834 0 0 0 0 1 exosome 0.438714617674152 0.438718591892419 0.31991052 0 hPsi_site_20558 iPseU_CNN:0.31991052;iRNA_PseU:0 20559 chr2 113305075 113305075 1 + G A CESC 113305074 + 113305054 113305094 41 TGGCTATGTTCCCATCATGGTGAAATCCAAGCTTTGCAACT TGGCTATGTTCCCATCATGGTAAAATCCAAGCTTTGCAACT < 41bp 0.42339222539469 0.830406790368678 0.33234137 0.7874088 prediction 0.660813580737355 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113305074 chr2:113305075 synonymous SNV . 0 22 hPsi_associated_SNPs_26835 0 0 1 0 2 Nucleus 0.43871859340933 0.438710815891794 0.5748176 0 hPsi_site_20559 iPseU_CNN:0.5748176;iRNA_PseU:0 20560 chr22 29834818 29834818 1 + C T GBM 29834819 - 29834799 29834839 41 GGAAGAAAATTTCCGTGAGGTGAAAGCCTGTTAGTTGTGAC GGAAGAAAATTTCCGTGAGGTAAAAGCCTGTTAGTTGTGAC < 41bp 0.540681622510573 0.871087831360206 0.30267343 0.7212035 prediction 0.660812417699267 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29834819 chr22:29834818 nonsynonymous SNV 0.013 1 22 hPsi_associated_SNPs_26836 0 0 0 0 0 exosome 0.43872048106626 0.438084129107557 0.442407 0 hPsi_site_20560 iPseU_CNN:0.442407;iRNA_PseU:0 20561 chr17 73016694 73016694 1 + G A BLCA 73016693 + 73016673 73016713 41 AAAATTCGAGACATGATCACTGAGGCCAGCCAGACACCGAA AAAATTCGAGACATGATCACTAAGGCCAGCCAGACACCGAA < 41bp 0.417980071036719 0.830398540782406 0.254112 0.297482 prediction 0.660797081564813 Functional Gain - MRPL58 ENSG00000167862 CDS Human protein_coding chr17:73016693 chr17:73016694 nonsynonymous SNV 0.656 0 22 hPsi_associated_SNPs_26837 0 0 1 0 1 nucleoplasm 0.43871858605438 0.438718679166566 0 0 hPsi_site_20561 iPseU_CNN:0;iRNA_PseU:0 20562 chr5 176859034 176859034 1 + G A UCEC 176859033 + 176859013 176859053 41 CTGTGCGAGCGGCAGCCCATTGGGCGCCTGCTGTTCCGAGA CTGTGCGAGCGGCAGCCCATTAGGCGCCTGCTGTTCCGAGA < 41bp 0.573548418359274 0.903939018518535 0.4026714 0.678326 prediction 0.660781200318522 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176859033 chr5:176859034 nonsynonymous SNV 0.612 4 22 hPsi_associated_SNPs_26838 0 0 1 0 2 Cytosol 0.438684659523734 0.438720012728088 0.356652 0 hPsi_site_20562 iPseU_CNN:0.356652;iRNA_PseU:0 20563 chr17 76219734 76219734 1 + C A UCEC 76219733 + 76219713 76219753 41 CTGTGGGCCCCTTAGCAATGTCTTAGGAAAGGAGATCAACA CTGTGGGCCCCTTAGCAATGTATTAGGAAAGGAGATCAACA < 41bp 0.492162282298709 0.830390454971886 0.2379115 0.2558955 prediction 0.660780909943772 Functional Gain - BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76219733 chr17:76219734 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_26839 0 0 1 0 0 Ribosome 0.438718592994942 0.438718590446518 0 0 hPsi_site_20563 iPseU_CNN:0;iRNA_PseU:0 20564 chr22 37710295 37710295 1 + G A rs5750409 37710294 + 37710274 37710314 41 CAGCTGGAGATGGCAGCCGTTGTTTGCGGAGCCCAGGCTGA CAGCTGGAGATGGCAGCCGTTATTTGCGGAGCCCAGGCTGA < 41bp 0.555653875471326 0.886038653273439 0.45109233 0.7642599 prediction 0.660769555604226 Functional Gain - CYTH4 ENSG00000100055 UTR3 Human protein_coding chr22:37710294 chr22:37710295 . . 0 22 hPsi_associated_SNPs_26840 0 0 0 0 0 exosome 0.438718600265612 0.438718598688098 0.5285198 0 hPsi_site_20564 iPseU_CNN:0.5285198;iRNA_PseU:0 20565 chr9 134363319 134363319 1 + C A BLCA 134363318 + 134363298 134363338 41 GGGGGCACAGCCTTGAAGCCTCCATACTCGGCGTTCCCAGG GGGGGCACAGCCTTGAAGCCTACATACTCGGCGTTCCCAGG < 41bp 0.517461245723715 0.847839821773244 0.43809262 0.4126149 prediction 0.660757152099058 Functional Gain - PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134363318 chr9:134363319 nonsynonymous SNV 0.957 1 22 hPsi_associated_SNPs_26841 0 0 1 0 1 Nucleus 0.438718593004791 0.438718592856315 0 0 hPsi_site_20565 iPseU_CNN:0;iRNA_PseU:0 20566 chr19 33587199 33587199 1 + G A MESO 33587198 + 33587178 33587218 41 TTTCACACCTAAAGATAATGTGCATGGTCTAGCTTACAAGG TTTCACACCTAAAGATAATGTACATGGTCTAGCTTACAAGG < 41bp 0.417128776150549 0.830370205364005 0.33035445 0.50246024 prediction 0.660740410728011 Functional Gain - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33587198 chr19:33587199 synonymous SNV . 0 22 hPsi_associated_SNPs_26842 0 0 1 0 0 Cytosol 0.438718592945091 0.438718555388025 0.00492048 0 hPsi_site_20566 iPseU_CNN:0.00492048;iRNA_PseU:0 20567 chr9 116357919 116357919 1 + C A CESC 116357918 + 116357898 116357938 41 AGCCTTCCTTCGCACTGAGTTCAGTGAGGAGAATCTGGAGT AGCCTTCCTTCGCACTGAGTTAAGTGAGGAGAATCTGGAGT < 41bp 0.500035101010559 0.830399386459552 0.45182848 0.69601446 prediction 0.660728570897986 Functional Gain - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116357918 chr9:116357919 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_26843 0 0 0 0 1 Nucleus 0.439021885522732 0.438718597796342 0.39202892 0 hPsi_site_20567 iPseU_CNN:0.39202892;iRNA_PseU:0 20568 chr10 46999231 46999231 1 + G A PAAD 46999230 + 46999210 46999250 41 GGCCCCTAGTGCTGCTGCTATGCAGAGGAGCCATTCAGACC GGCCCCTAGTGCTGCTGCTATACAGAGGAGCCATTCAGACC < 41bp 0.569916281504148 0.900280077644329 0.35987815 0.72379005 prediction 0.66072759228036 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:46999230 chr10:46999231 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_26844 0 0 0 0 0 exosome 0.438718124728367 0.438712423912994 0.4475801 0 hPsi_site_20568 iPseU_CNN:0.4475801;iRNA_PseU:0 20569 chr3 68055862 68055862 1 + C A LUAD 68055861 + 68055841 68055881 41 TGGATCCCTTCAGCACACTTTCCAGCAGCATCACCTGCACA TGGATCCCTTCAGCACACTTTACAGCAGCATCACCTGCACA < 41bp 0.492375455993686 0.830359926961304 0.4554624 0.6575458 prediction 0.660719853922608 Functional Gain - FAM19A1 ENSG00000183662 CDS Human protein_coding chr3:68055861 chr3:68055862 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_26845 0 0 0 0 2 exosome 0.438734522075593 0.437154689175285 0.3150916 0 hPsi_site_20569 iPseU_CNN:0.3150916;iRNA_PseU:0 20570 chr19 50478203 50478203 1 + G A rs540048313 50478202 + 50478182 50478222 41 GGCAAGGGGCAGGGTGTGGGTGTGGTGGACAGAGAACGGGC GGCAAGGGGCAGGGTGTGGGTATGGTGGACAGAGAACGGGC < 41bp 0.461978990750326 0.830344312712432 0.28454533 0.33106697 prediction 0.660688625424864 Functional Gain - SIGLEC16 ENSG00000161643 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:50478202 chr19:50478203 . . 0 22 hPsi_associated_SNPs_26846 0 0 0 0 0 unknown 0.438700548773251 0.43875310612753 0 0 hPsi_site_20570 iPseU_CNN:0;iRNA_PseU:0 20571 chr3 128991183 128991183 1 + G T LIHC 128991182 + 128991162 128991202 41 GAGGTGCTCTGTTACGTGCCTGCCCGGAGCCTGCCCTACAA GAGGTGCTCTGTTACGTGCCTTCCCGGAGCCTGCCCTACAA < 41bp 0.51270156614412 0.843041269594811 0.18584937 0.6080052 prediction 0.660679406901381 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128991182 chr3:128991183 nonsynonymous SNV 0.655 2 22 hPsi_associated_SNPs_26847 0 0 1 0 2 Nucleus 0.438718592985297 0.438718592995101 0.2160104 0 hPsi_site_20571 iPseU_CNN:0.2160104;iRNA_PseU:0 20572 chr17 29220745 29220745 1 + C A UCEC 29220744 + 29220724 29220764 41 ACAATCCAGAGACAAAGAAATCTATTCCTTGTCCTCCTAAA ACAATCCAGAGACAAAGAAATATATTCCTTGTCCTCCTAAA < 41bp 0.492021660981231 0.830338307833512 0.66978663 0.46970993 prediction 0.660676615667023 Functional Gain - ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29220744 chr17:29220745 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_26848 0 0 1 0 0 chromatin 0.438716499416273 0.438716221508104 0 0 hPsi_site_20572 iPseU_CNN:0;iRNA_PseU:0 20573 chr22 29708037 29708037 1 + G A BLCA 29708036 + 29708016 29708056 41 CTGGCCAATGCCCGGGCCCTTGAGGCTGTTGCTAGCGTGAC CTGGCCAATGCCCGGGCCCTTAAGGCTGTTGCTAGCGTGAC < 41bp 0.428891650342537 0.830336718680805 0.22720769 0.28284675 prediction 0.66067343736161 Functional Gain - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29708036 chr22:29708037 synonymous SNV 0.711 0 22 hPsi_associated_SNPs_26849 0 0 0 0 0 Ribosome 0.438718592995102 0.438718592995078 0 0 hPsi_site_20573 iPseU_CNN:0;iRNA_PseU:0 20574 chr5 53751838 53751838 1 + C A UCEC 53751837 + 53751817 53751857 41 AGGCAAATCCCACTTTCAGATCCTGCTGGACGTGGTCCAGT AGGCAAATCCCACTTTCAGATACTGCTGGACGTGGTCCAGT < 41bp 0.482519631454137 0.830335245616743 0.26360345 0.83188987 prediction 0.660670491233486 Functional Gain - HSPB3 ENSG00000169271 CDS Human protein_coding chr5:53751837 chr5:53751838 synonymous SNV . 0 22 hPsi_associated_SNPs_26850 0 0 0 0 0 exosome 0.438718587465758 0.4388840314676 0.66377974 0 hPsi_site_20574 iPseU_CNN:0.66377974;iRNA_PseU:0 20575 chrX 15560135 15560135 1 + C A UCEC 15560134 + 15560114 15560154 41 CCATCCCAAGCTGGTTAAATTCTATGGAGTGTGTTCAAAGG CCATCCCAAGCTGGTTAAATTATATGGAGTGTGTTCAAAGG < 41bp 0.479168525851858 0.830334757344241 0.23340133 0.33619702 prediction 0.660669514688482 Functional Gain - BMX ENSG00000102010 CDS Human protein_coding chrX:15560134 chrX:15560135 nonsynonymous SNV 0.951 1 22 hPsi_associated_SNPs_26851 0 0 0 0 1 cytosol 0.438718819219278 0.438718591744252 0 0 hPsi_site_20575 iPseU_CNN:0;iRNA_PseU:0 20576 chr3 14769996 14769996 1 + C A PAAD 14769995 + 14769975 14770015 41 AAGGAGGAGGAAGAATTTGTTCGGTTCAAGATGAGATCCAG AAGGAGGAGGAAGAATTTGTTAGGTTCAAGATGAGATCCAG < 41bp 0.474723359395789 0.830334537353383 0.37811396 0.5858702 prediction 0.660669074706766 Functional Gain - C3orf20 ENSG00000131379 CDS Human protein_coding chr3:14769995 chr3:14769996 synonymous SNV . 0 22 hPsi_associated_SNPs_26852 0 0 0 0 1 nucleoplasm 0.438718574902405 0.438713431657938 0.1717404 0 hPsi_site_20576 iPseU_CNN:0.1717404;iRNA_PseU:0 20577 chr16 57012110 57012110 1 + G A SKCM 57012109 + 57012089 57012129 41 GGTCAATTCTTCAGTGATGGTGAAATTCCTCTTTCCACGCC GGTCAATTCTTCAGTGATGGTAAAATTCCTCTTTCCACGCC < 41bp 0.564248361507394 0.894581431739025 0.3014638 0.64221245 prediction 0.660666140463261 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:57012109 chr16:57012110 synonymous SNV . 0 22 hPsi_associated_SNPs_26853 0 0 1 0 1 exosome 0.438718592995097 0.438718593851528 0.2844249 0 hPsi_site_20577 iPseU_CNN:0.2844249;iRNA_PseU:0 20578 chr1 12090088 12090088 1 + G A SKCM 12090087 + 12090067 12090107 41 CACTGCCCCCCTGCGCAGGGTGAGCATCCCGCTGTCGATCC CACTGCCCCCCTGCGCAGGGTAAGCATCCCGCTGTCGATCC < 41bp 0.42201232786065 0.83032744112409 0.28433532 0.4820461 prediction 0.660654882248179 Functional Gain - MIIP ENSG00000116691 CDS Human protein_coding chr1:12090087 chr1:12090088 synonymous SNV . 0 22 hPsi_associated_SNPs_26854 0 0 1 0 1 chromatin 0.438718592449081 0.438718597889972 0 0 hPsi_site_20578 iPseU_CNN:0;iRNA_PseU:0 20579 chr11 123886816 123886816 1 + G A CESC 123886815 + 123886795 123886835 41 CAGATCCAGCACTACTTCTGTGACGCACCGCCCATCCTGAA CAGATCCAGCACTACTTCTGTAACGCACCGCCCATCCTGAA < 41bp 0.562412926215403 0.892738362913214 0.27413946 0.5138472 prediction 0.660650873395621 Functional Gain - OR10G4 ENSG00000254737 CDS Human protein_coding chr11:123886815 chr11:123886816 nonsynonymous SNV 0.032 4 22 hPsi_associated_SNPs_26855 0 0 0 0 0 unknown 0.438712193318559 0.438703993766058 0.0276943999999999 0 hPsi_site_20579 iPseU_CNN:0.0276943999999999;iRNA_PseU:0 20580 chr19 7682718 7682718 1 + G A LUSC 7682717 + 7682697 7682737 41 GTTCCGGGCGCTCTACACGCTGTCGGGGGAGACAGAGGAGC GTTCCGGGCGCTCTACACGCTATCGGGGGAGACAGAGGAGC < 41bp 0.561504037199725 0.891825320496215 0.8354349 0.90023685 prediction 0.660642566592979 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7682717 chr19:7682718 synonymous SNV . 0 22 hPsi_associated_SNPs_26856 0 0 1 0 1 nucleus 0.438774318074755 0.438717027068983 0.1296039 0 hPsi_site_20580 iPseU_CNN:0.1296039;iRNA_PseU:0 20581 chr4 144135204 144135204 1 + C A UCEC 144135203 + 144135183 144135223 41 TTTACTGTTCTGAAAACACTTCTGTCCCTAACGAATCTAAC TTTACTGTTCTGAAAACACTTATGTCCCTAACGAATCTAAC < 41bp 0.498074754421838 0.83031653758798 0.26261446 0.3175259 prediction 0.66063307517596 Functional Gain - USP38 ENSG00000170185 CDS Human protein_coding chr4:144135203 chr4:144135204 nonsynonymous SNV 0.822 1 22 hPsi_associated_SNPs_26857 0 0 1 0 0 Ribosome 0.438714936830989 0.43871866072488 0 0 hPsi_site_20581 iPseU_CNN:0;iRNA_PseU:0 20582 chr1 18703363 18703363 1 + G A LUSC 18703362 + 18703342 18703382 41 CGCCTCCTGGACGGCAGCGCTGAGTTCGACGGGAAGGAGCT CGCCTCCTGGACGGCAGCGCTAAGTTCGACGGGAAGGAGCT < 41bp 0.419910613841849 0.830316335003682 0.28940693 0.36377448 prediction 0.660632670007363 Functional Gain - IGSF21 ENSG00000117154 CDS Human protein_coding chr1:18703362 chr1:18703363 nonsynonymous SNV 0.075 2 22 hPsi_associated_SNPs_26858 0 0 0 0 1 Nucleus 0.438580909762808 0.438706709957209 0 0 hPsi_site_20582 iPseU_CNN:0;iRNA_PseU:0 20583 chr3 5024807 5024807 1 + C A BLCA 5024806 + 5024786 5024826 41 GAAAAACTGCGTGCCAGTCATCCAGCGGACTTTCGCTCACT GAAAAACTGCGTGCCAGTCATACAGCGGACTTTCGCTCACT < 41bp 0.475179322267418 0.830314636604976 0.22978827 0.29176414 prediction 0.660629273209951 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5024806 chr3:5024807 synonymous SNV . 0 22 hPsi_associated_SNPs_26859 0 0 1 0 0 chromatin 0.438709643148264 0.438674440147514 0 0 hPsi_site_20583 iPseU_CNN:0;iRNA_PseU:0 20584 chr11 1009157 1009157 1 + C A READ 1009156 + 1009136 1009176 41 GCCCATCACTCTCAACAAATTCTTCCAGCCGACAGAAATGG GCCCATCACTCTCAACAAATTATTCCAGCCGACAGAAATGG < 41bp 0.467473121990163 0.830312902345161 0.2402314 0.30317676 prediction 0.660625804690322 Functional Gain - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:1009156 chr11:1009157 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_26860 0 0 1 0 2 Nucleus 0.438664259677319 0.440860138641491 0 0 hPsi_site_20584 iPseU_CNN:0;iRNA_PseU:0 20585 chr17 48696207 48696207 1 + G A COAD 48696206 + 48696186 48696226 41 GCTAGAGGCTGAGCTGGAGCTGGAGATGAAGACCCTCAGCC GCTAGAGGCTGAGCTGGAGCTAGAGATGAAGACCCTCAGCC < 41bp 0.475350410206291 0.830307668589427 0.3827669 0.659768 prediction 0.660615337178854 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48696206 chr17:48696207 synonymous SNV . 0 22 hPsi_associated_SNPs_26861 0 0 0 0 0 exosome 0.438718617423987 0.438717271650131 0.319536 0 hPsi_site_20585 iPseU_CNN:0.319536;iRNA_PseU:0 20586 chr5 5209294 5209294 1 + G T UCEC 5209293 + 5209273 5209313 41 TTGCCAGGAGAATTATATGATGCAAACACACAGTGCAAGTG TTGCCAGGAGAATTATATGATTCAAACACACAGTGCAAGTG < 41bp 0.500310845763459 0.830617343630246 0.26030236 0.3434797 prediction 0.660612995733573 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5209293 chr5:5209294 nonsynonymous SNV 0.889 4 22 hPsi_associated_SNPs_26862 0 0 0 0 1 exosome 0.438716312963808 0.43872051164589 0 0 hPsi_site_20586 iPseU_CNN:0;iRNA_PseU:0 20587 chr2 131487061 131487061 1 + G A LIHC 131487060 + 131487040 131487080 41 ATCTCCTCCAGCAGCCTGGGTGGCTGGGAGCTGGGCCGCAT ATCTCCTCCAGCAGCCTGGGTAGCTGGGAGCTGGGCCGCAT < 41bp 0.433616145330268 0.830305562833349 0.1709333 0.39505664 prediction 0.660611125666697 Functional Gain - GPR148 ENSG00000173302 CDS Human protein_coding chr2:131487060 chr2:131487061 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_26863 0 0 0 0 0 unknown 0.438719060091963 0.438718592995437 0 0 hPsi_site_20587 iPseU_CNN:0;iRNA_PseU:0 20588 chr19 12866708 12866708 1 + G A SKCM 12866707 + 12866687 12866727 41 AACCCCTTCGGAGAGGACGATGATGACTTTGAGACCAACTT AACCCCTTCGGAGAGGACGATAATGACTTTGAGACCAACTT < 41bp 0.418315458674586 0.830304913053099 0.24803728 0.23603645 prediction 0.660609826106199 Functional Gain - BEST2 ENSG00000039987 CDS Human protein_coding chr19:12866707 chr19:12866708 nonsynonymous SNV 0.953 5 22 hPsi_associated_SNPs_26864 0 0 0 0 2 exosome 0.438642731838613 0.438760551352428 0 0 hPsi_site_20588 iPseU_CNN:0;iRNA_PseU:0 20589 chr20 33581983 33581983 1 + G A UCEC 33581982 + 33581962 33582002 41 ACCATCCAGTGGAACATCCGTGCCTTCAATGCCGTCAAGAA ACCATCCAGTGGAACATCCGTACCTTCAATGCCGTCAAGAA < 41bp 0.425771940868331 0.830304562496823 0.3381002 0.7009351 prediction 0.660609124993645 Functional Gain - MYH7B ENSG00000078814 CDS Human protein_coding chr20:33581982 chr20:33581983 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_26865 0 0 0 0 1 chromatin 0.438712475651836 0.43871861450893 0.4018702 0 hPsi_site_20589 iPseU_CNN:0.4018702;iRNA_PseU:0 20590 chr19 41239168 41239168 1 + G A BLCA 41239167 + 41239147 41239187 41 GACCCTGGGGCCCCTACCCCTGAGGAGCATGCCCAGGGTGC GACCCTGGGGCCCCTACCCCTAAGGAGCATGCCCAGGGTGC < 41bp 0.408633125250728 0.830302010576588 0.32448655 0.51906455 prediction 0.660604021153177 Functional Gain - ITPKC ENSG00000086544 CDS Human protein_coding chr19:41239167 chr19:41239168 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_26866 0 0 1 0 0 Cytosol 0.438718589891836 0.438735163914542 0.0381290999999999 0 hPsi_site_20590 iPseU_CNN:0.0381290999999999;iRNA_PseU:0 20591 chr19 57954817 57954817 1 + G A rs61747531 57954816 + 57954796 57954836 41 AAGGACATTCTGCACCTGGCTGAGCACGATGGAACACACCC AAGGACATTCTGCACCTGGCTAAGCACGATGGAACACACCC < 41bp 0.437057800865654 0.830299488830068 0.25699896 0.35002154 prediction 0.660598977660135 Functional Gain - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57954816 chr19:57954817 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_26867 0 0 1 0 0 exosome 0.438724753279036 0.438717941797296 0 0 hPsi_site_20591 iPseU_CNN:0;iRNA_PseU:0 20592 chr19 56459333 56459333 1 + C A GBM 56459332 + 56459312 56459352 41 CATCCTCCTCCACTCACAGTTCTCATATTCCGCCCTGGACA CATCCTCCTCCACTCACAGTTATCATATTCCGCCCTGGACA < 41bp 0.521971614398541 0.852268284187478 0.24941137 0.31322092 prediction 0.660593339577872 Functional Gain - NLRP8 ENSG00000179709 CDS Human protein_coding chr19:56459332 chr19:56459333 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_26868 0 0 0 0 0 unknown 0.438717158101479 0.438713357738648 0 0 hPsi_site_20592 iPseU_CNN:0;iRNA_PseU:0 20593 chr22 51117268 51117268 1 + G A HNSC 51117267 + 51117247 51117287 41 AAGGTGCTGAAGAATGGTGGTGCCCACCTGGACTTCCGCAC AAGGTGCTGAAGAATGGTGGTACCCACCTGGACTTCCGCAC < 41bp 0.423696328982531 0.830295324708334 0.29636693 0.65436304 prediction 0.660590649416667 Functional Gain - SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51117267 chr22:51117268 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_26869 0 0 0 0 1 cytosol 0.438718593097028 0.438718593149014 0.30872608 0 hPsi_site_20593 iPseU_CNN:0.30872608;iRNA_PseU:0 20594 chr3 126915570 126915570 1 + C A LUSC 126915569 + 126915549 126915589 41 GAAACAAGCAGAGCAGAAGGTCCGCCGTGCCTTCGAGGCCT GAAACAAGCAGAGCAGAAGGTACGCCGTGCCTTCGAGGCCT < 41bp 0.505839633971322 0.836132115504844 0.26589108 0.7216452 prediction 0.660584963067044 Functional Gain - C3orf56 ENSG00000214324 CDS Human lincRNA chr3:126915569 chr3:126915570 synonymous SNV . 0 22 hPsi_associated_SNPs_26870 0 0 0 0 0 unknown 0.43872085661105 0.438716936137938 0.4432904 0 hPsi_site_20594 iPseU_CNN:0.4432904;iRNA_PseU:0 20595 chr11 67818126 67818126 1 + G A SARC 67818125 + 67818105 67818145 41 CTTCCTGCACGCCCTGCGGCTGCACTGGTGAGCGACCACCC CTTCCTGCACGCCCTGCGGCTACACTGGTGAGCGACCACCC < 41bp 0.432986736237454 0.830285898496822 0.2941805 0.47918057 prediction 0.660571796993644 Functional Gain - TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818125 chr11:67818126 synonymous SNV . 0 22 hPsi_associated_SNPs_26871 0 0 1 0 2 Nucleus 0.438738872904339 0.438570430849146 0 0 hPsi_site_20595 iPseU_CNN:0;iRNA_PseU:0 20596 chr15 22382784 22382784 1 + G A COAD 22382783 + 22382763 22382803 41 CATCACTCAGCTCTTTTTCTTGCACTTCCTTGGAGGAGGGG CATCACTCAGCTCTTTTTCTTACACTTCCTTGGAGGAGGGG < 41bp 0.566482118128892 0.896765827132536 0.2348513 0.3533645 prediction 0.660567418007289 Functional Gain - OR4N4 ENSG00000183706 CDS Human protein_coding chr15:22382783 chr15:22382784 synonymous SNV . 0 22 hPsi_associated_SNPs_26872 0 0 0 0 0 unknown 0.438718500106324 0.438718571456915 0 0 hPsi_site_20596 iPseU_CNN:0;iRNA_PseU:0 20597 chr22 39477124 39477124 1 + G A CESC 39477123 + 39477103 39477143 41 AAGGTTACCCTGACCATCTTTGTTGCCCGCCTCTACTACTT AAGGTTACCCTGACCATCTTTATTGCCCGCCTCTACTACTT < 41bp 0.41837922477564 0.830281939139811 0.18886098 0.24330136 prediction 0.660563878279621 Functional Gain - APOBEC3G ENSG00000239713 CDS Human protein_coding chr22:39477123 chr22:39477124 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_26873 0 0 0 0 0 Cytosol 0.43871909020419 0.438718866718071 0 0 hPsi_site_20597 iPseU_CNN:0;iRNA_PseU:0 20598 chr20 23420947 23420947 1 + G A PCPG 23420946 + 23420926 23420966 41 AACCCCCTGCTGCTGCTGATTGCCCTGGTCCTGTCAGCCAA AACCCCCTGCTGCTGCTGATTACCCTGGTCCTGTCAGCCAA < 41bp 0.563030744959187 0.893312468254417 0.19772586 0.24785453 prediction 0.66056344659046 Functional Gain - CSTL1 ENSG00000125823 CDS Human protein_coding chr20:23420946 chr20:23420947 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_26874 0 0 0 0 0 unknown 0.438783883220429 0.43872318408373 0 0 hPsi_site_20598 iPseU_CNN:0;iRNA_PseU:0 20599 chr7 7636045 7636045 1 + G A HNSC 7636044 + 7636024 7636064 41 GTCGAAAACCACTTCCTCGATGTGCGCTTTGTCTCATTAAT GTCGAAAACCACTTCCTCGATATGCGCTTTGTCTCATTAAT < 41bp 0.562842085305942 0.893120542494373 0.45272815 0.6986074 prediction 0.660556914376861 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7636044 chr7:7636045 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26875 0 0 1 0 1 Nucleus 0.438738794734935 0.438672119797993 0.3972148 0 hPsi_site_20599 iPseU_CNN:0.3972148;iRNA_PseU:0 20600 chr15 74178880 74178880 1 + C A rs145669593 74178879 + 74178859 74178899 41 AGGGTGCAGGGGCTGTGCAGTCCCTCTTCCCCTGGTTCTGC AGGGTGCAGGGGCTGTGCAGTACCTCTTCCCCTGGTTCTGC < 41bp 0.460178709352292 0.830270316254338 0.30457836 0.76609826 prediction 0.660540632508677 Functional Gain - TBC1D21 ENSG00000167139 CDS Human protein_coding chr15:74178879 chr15:74178880 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26876 0 0 0 0 2 exosome 0.438718593036275 0.438718592522249 0.53219652 0 hPsi_site_20600 iPseU_CNN:0.53219652;iRNA_PseU:0 20601 chr7 4823408 4823408 1 + C A UCEC 4823407 + 4823387 4823427 41 CCCACACTCCGGCGGCTTCTTCTCCACGCCCAGGGCCCGGC CCCACACTCCGGCGGCTTCTTATCCACGCCCAGGGCCCGGC < 41bp 0.47014773594931 0.830268032323694 0.34842587 0.58087766 prediction 0.660536064647387 Functional Gain - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823407 chr7:4823408 nonsynonymous SNV 0.773 3 22 hPsi_associated_SNPs_26877 0 0 0 0 2 chromatin 0.438718593930518 0.438718592913681 0.16175532 0 hPsi_site_20601 iPseU_CNN:0.16175532;iRNA_PseU:0 20602 chr19 1272041 1272041 1 + G A BRCA 1272040 + 1272020 1272060 41 GGGTCCTACAGAGACAGTTATGACAGTTACGGTAAGTCACA GGGTCCTACAGAGACAGTTATAACAGTTACGGTAAGTCACA < 41bp 0.416296895274356 0.830267993761291 0.24045807 0.31652236 prediction 0.660535987522582 Functional Gain - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272040 chr19:1272041 nonsynonymous SNV 0.594 2 22 hPsi_associated_SNPs_26878 0 0 1 1 2 Ribosome 0.438676028192503 0.43871886625287 0 0 hPsi_site_20602 iPseU_CNN:0;iRNA_PseU:0 20603 chr17 62081178 62081178 1 + C T SKCM 62081179 - 62081159 62081199 41 GGCAATGAGACTCTGCACTATGAGACCTTCGGGAAGGCAGC GGCAATGAGACTCTGCACTATAAGACCTTCGGGAAGGCAGC < 41bp 0.430541718409743 0.830267892460687 0.18829218 0.23701802 prediction 0.660535784921374 Functional Gain - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62081179 chr17:62081178 nonsynonymous SNV 0.129 0 22 hPsi_associated_SNPs_26879 0 0 0 0 0 Endoplasmic reticulum 0.43870215978552 0.438718593105237 0 0 hPsi_site_20603 iPseU_CNN:0;iRNA_PseU:0 20604 chr4 15444129 15444129 1 + C A UCEC 15444128 + 15444108 15444148 41 CATCTGTGCTTTCCCAGGGATCTATTACTTTTCTTATGATA CATCTGTGCTTTCCCAGGGATATATTACTTTTCTTATGATA < 41bp 0.490347182101314 0.830263534248132 0.22353533 0.25950155 prediction 0.660527068496265 Functional Gain - C1QTNF7 ENSG00000163145 CDS Human protein_coding chr4:15444128 chr4:15444129 synonymous SNV . 0 22 hPsi_associated_SNPs_26880 0 0 0 0 0 Nucleus 0.43871392152314 0.438718499890201 0 0 hPsi_site_20604 iPseU_CNN:0;iRNA_PseU:0 20605 chr1 114440545 114440545 1 + C A UCEC 114440544 + 114440524 114440564 41 GAGGACACAACCAAACCAGGTCTCGGAAAGTCTGCACCACC GAGGACACAACCAAACCAGGTATCGGAAAGTCTGCACCACC < 41bp 0.539128746354234 0.869382351590093 0.44799945 0.87773263 prediction 0.660507210471719 Functional Gain - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114440544 chr1:114440545 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26881 0 0 0 0 2 chromatin 0.438717464927328 0.438718595398819 0.75546526 0 hPsi_site_20605 iPseU_CNN:0.75546526;iRNA_PseU:0 20606 chr17 31261313 31261313 1 + C A UCEC 31261312 + 31261292 31261332 41 TCTTCTTGTTTCCCCAGGGGTCTCATGTCCCACTGCATTGC TCTTCTTGTTTCCCCAGGGGTATCATGTCCCACTGCATTGC < 41bp 0.467261990659869 0.830253298774452 0.3198092 0.55550736 prediction 0.660506597548904 Functional Gain - TMEM98 ENSG00000006042 CDS Human protein_coding chr17:31261312 chr17:31261313 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26882 0 0 1 0 2 chromatin 0.438718543257413 0.438721820043293 0.11101472 0 hPsi_site_20606 iPseU_CNN:0.11101472;iRNA_PseU:0 20607 chr1 168282426 168282426 1 + G A rs10918869 168282425 + 168282405 168282445 41 ATGATGCTAGTTAGATCATTTGCATCTCTCCACCATTTTCT ATGATGCTAGTTAGATCATTTACATCTCTCCACCATTTTCT < 41bp 0.548500046048594 0.878751687693152 0.30730316 0.5187105 prediction 0.660503283289117 Functional Gain - TBX19 ENSG00000143178 UTR3 Human protein_coding chr1:168282425 chr1:168282426 . . 0 22 hPsi_associated_SNPs_26883 1 0 0 1 0 cytosol 0.438712748759613 0.438715907474863 0.0374209999999999 0 hPsi_site_20607 iPseU_CNN:0.0374209999999999;iRNA_PseU:0 20608 chr4 9784336 9784336 1 + C A LUAD 9784335 + 9784315 9784355 41 TGAATCGAACCTACGCCATCTCTTCCTCGCTCATCAGCTTC TGAATCGAACCTACGCCATCTATTCCTCGCTCATCAGCTTC < 41bp 0.522876526851847 0.853125551422976 0.21183023 0.54824746 prediction 0.660498049142259 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784335 chr4:9784336 nonsynonymous SNV 0.396 4 22 hPsi_associated_SNPs_26884 0 0 0 0 0 unknown 0.430695919258114 0.434110213525699 0.09649492 0 hPsi_site_20608 iPseU_CNN:0.09649492;iRNA_PseU:0 20609 chr5 76264621 76264621 1 + G A HNSC 76264620 + 76264600 76264640 41 AGTGGAAAACACGTAAATCGTGTGACTTTTGAGTATCGTCA AGTGGAAAACACGTAAATCGTATGACTTTTGAGTATCGTCA < 41bp 0.442328854037047 0.830243752062762 0.30419272 0.50160676 prediction 0.660487504125524 Functional Gain - CRHBP ENSG00000145708 CDS Human protein_coding chr5:76264620 chr5:76264621 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_26885 0 0 0 0 1 Cytosol 0.439170729211512 0.438966661394905 0.00321352000000008 0 hPsi_site_20609 iPseU_CNN:0.00321352000000008;iRNA_PseU:0 20610 chr19 36912516 36912516 1 + G A rs149569853 36912515 + 36912495 36912535 41 GCGCATCACCATGCGCGGCCTGGCTTCGGAGCCGCTGGACA GCGCATCACCATGCGCGGCCTAGCTTCGGAGCCGCTGGACA < 41bp 0.484953159771688 0.830239996684289 0.20730504 0.3640837 prediction 0.660479993368579 Functional Gain - LOC644189 ENSG00000267142 ncRNA_exonic Human processed_pseudogene chr19:36912515 chr19:36912516 . . 0 22 hPsi_associated_SNPs_26886 0 0 0 0 0 unknown 0.438713598824719 0.438723006389628 0 0 hPsi_site_20610 iPseU_CNN:0;iRNA_PseU:0 20611 chr18 21106645 21106645 1 + C A PAAD 21106644 + 21106624 21106664 41 AAACTTGAGCCCATAGTAAATCTCTTACCAGACAAAGGAAG AAACTTGAGCCCATAGTAAATATCTTACCAGACAAAGGAAG < 41bp 0.538118027598455 0.868354949816063 0.22435296 0.4078189 prediction 0.660473844435216 Functional Gain - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21106644 chr18:21106645 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_26887 0 0 1 0 1 Ribosome 0.43872436116961 0.438718567658262 0 0 hPsi_site_20611 iPseU_CNN:0;iRNA_PseU:0 20612 chr16 57060099 57060099 1 + G A ACC 57060098 + 57060078 57060118 41 TGTGCCAAGTCGCCTGTCTCTGCCTCCACCATCTGCTTCCT TGTGCCAAGTCGCCTGTCTCTACCTCCACCATCTGCTTCCT < 41bp 0.426039069249364 0.830236428551224 0.44657695 0.7605132 prediction 0.660472857102447 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57060098 chr16:57060099 nonsynonymous SNV 0.944 3 22 hPsi_associated_SNPs_26888 0 0 1 0 0 Ribosome 0.438718086551169 0.438721192747485 0.5210264 0 hPsi_site_20612 iPseU_CNN:0.5210264;iRNA_PseU:0 20613 chr17 3324558 3324558 1 + G A CESC 3324557 + 3324537 3324577 41 TCCTATGCCCATGTGGTAGCTGCTGTGCTGCAAATCCGCTC TCCTATGCCCATGTGGTAGCTACTGTGCTGCAAATCCGCTC < 41bp 0.437317151221675 0.830231499784976 0.24175394 0.78205484 prediction 0.660462999569953 Functional Gain - OR3A3 ENSG00000159961 CDS Human protein_coding chr17:3324557 chr17:3324558 nonsynonymous SNV 0.039 2 22 hPsi_associated_SNPs_26889 0 0 0 0 0 exosome 0.438718757206586 0.438720065042934 0.56410968 0 hPsi_site_20613 iPseU_CNN:0.56410968;iRNA_PseU:0 20614 chr5 54327310 54327310 1 + C A COAD 54327309 + 54327289 54327329 41 GGGGAGCCACCGATCCAGATTCATTAAGACCTTCTGACACC GGGGAGCCACCGATCCAGATTAATTAAGACCTTCTGACACC < 41bp 0.50660994584234 0.836841267138021 0.27981156 0.4705949 prediction 0.660462642591362 Functional Gain - GZMK ENSG00000113088 CDS Human protein_coding chr5:54327309 chr5:54327310 stopgain 0.000 0 22 hPsi_associated_SNPs_26890 0 0 0 0 0 exosome 0.438718390235779 0.438718589583958 0 0 hPsi_site_20614 iPseU_CNN:0;iRNA_PseU:0 20615 chr9 139735128 139735128 1 + G A rs566292626 139735127 + 139735107 139735147 41 GGCATTGGTGGTCCCCAGGCTGGGCCCTGCAGGTGCTGGGC GGCATTGGTGGTCCCCAGGCTAGGCCCTGCAGGTGCTGGGC < 41bp 0.556133711627932 0.886361433006113 0.2470465 0.674503 prediction 0.660455442756361 Functional Gain - RABL6 ENSG00000196642 CDS Human protein_coding chr9:139735127 chr9:139735128 stopgain 0.056 0 22 hPsi_associated_SNPs_26891 0 0 1 0 0 chromatin 0.438718589171451 0.438718592995309 0.349006 0 hPsi_site_20615 iPseU_CNN:0.349006;iRNA_PseU:0 20616 chr3 121976004 121976004 1 + C A LUSC 121976003 + 121975983 121976023 41 ATAAACAGCAGCCCAGCCCTTCTTCCCAACTTGACGCTGGG ATAAACAGCAGCCCAGCCCTTATTCCCAACTTGACGCTGGG < 41bp 0.536692516530012 0.866918134475139 0.37182248 0.30396003 prediction 0.660451235890255 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:121976003 chr3:121976004 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_26892 0 0 0 0 1 exosome 0.4387284597138 0.438736419192781 0 0 hPsi_site_20616 iPseU_CNN:0;iRNA_PseU:0 20617 chrX 79698285 79698285 1 + C A UCEC 79698284 + 79698264 79698304 41 AATGGAATCAGCTATAAGGATCTGGACGTTATTTTTGGTGT AATGGAATCAGCTATAAGGATATGGACGTTATTTTTGGTGT < 41bp 0.504338178248733 0.834561350052017 0.8175974 0.76826787 prediction 0.660446343606568 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79698284 chrX:79698285 nonsynonymous SNV 0.301 4 22 hPsi_associated_SNPs_26893 0 0 0 0 0 unknown 0.438718569497632 0.438718532002987 0 0 hPsi_site_20617 iPseU_CNN:0;iRNA_PseU:0 20618 chr6 1395439 1395439 1 + G A rs532641043 1395438 + 1395418 1395458 41 TGTGAAAAAAGCAGACAAGTTGTGTGTGTGTGTGTGTGTCT TGTGAAAAAAGCAGACAAGTTATGTGTGTGTGTGTGTGTCT < 41bp 0.514431098369698 0.84465194712768 0.2663625 0.52611095 prediction 0.660441697515964 Functional Gain - FOXF2 ENSG00000137273 UTR3 Human protein_coding chr6:1395438 chr6:1395439 . . 0 22 hPsi_associated_SNPs_26894 0 0 1 0 0 exosome 0.441200689300517 0.440877212934302 0.0522218999999999 0 hPsi_site_20618 iPseU_CNN:0.0522218999999999;iRNA_PseU:0 20619 chr12 109947467 109947467 1 + C A SARC 109947466 + 109947446 109947486 41 ACTGGAAGAGCTGGTCACTATCTCCTCTTTCCTGAATTCTT ACTGGAAGAGCTGGTCACTATATCCTCTTTCCTGAATTCTT < 41bp 0.522799821622984 0.853020248442646 0.37277687 0.46165982 prediction 0.660440853639323 Functional Gain - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109947466 chr12:109947467 synonymous SNV . 0 22 hPsi_associated_SNPs_26895 0 0 1 1 2 Cytosol 0.438718592855993 0.438718586155558 0 0 hPsi_site_20619 iPseU_CNN:0;iRNA_PseU:0 20620 chr2 171702258 171702258 1 + G A UCEC 171702257 + 171702237 171702277 41 GCTGGGGCTGCACTTGGCTTTGGAACTGACAATGTGATTTT GCTGGGGCTGCACTTGGCTTTAGAACTGACAATGTGATTTT < 41bp 0.412931223501403 0.830218451486033 0.26842004 0.46822703 prediction 0.660436902972066 Functional Gain - GAD1 ENSG00000128683 CDS Human protein_coding chr2:171702257 chr2:171702258 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26896 0 0 1 0 1 Cytosol 0.438420974132918 0.433829594172463 0 0 hPsi_site_20620 iPseU_CNN:0;iRNA_PseU:0 20621 chrX 106890840 106890840 1 + C A UCEC 106890839 + 106890819 106890859 41 ACATTTTTTCCCTCTAGACTTCTCTCAGCTGGCGCCACCAG ACATTTTTTCCCTCTAGACTTATCTCAGCTGGCGCCACCAG < 41bp 0.53780632593529 0.868023009407479 0.32157406 0.40267932 prediction 0.660433366944377 Functional Gain - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106890839 chrX:106890840 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_26897 0 0 1 0 1 Ribosome 0.438780904280504 0.438892457697167 0 0 hPsi_site_20621 iPseU_CNN:0;iRNA_PseU:0 20622 chr11 62435118 62435118 1 + G T READ 62435119 - 62435099 62435139 41 GAAGAAGATGCTTGTTGGATTCTTGAGGACACAGCATGTCT GAAGAAGATGCTTGTTGGATTATTGAGGACACAGCATGTCT < 41bp 0.53512812468047 0.865344785201019 0.47740626 0.659372 prediction 0.660433321041096 Functional Gain - LBHD1 ENSG00000162194 CDS Human protein_coding chr11:62435119 chr11:62435118 nonsynonymous SNV 0.780 0 22 hPsi_associated_SNPs_26898 0 0 1 0 0 Ribosome 0.438706526796505 0.438764708873325 0.318744 0 hPsi_site_20622 iPseU_CNN:0.318744;iRNA_PseU:0 20623 chr11 67790118 67790118 1 + C A UCEC 67790117 + 67790097 67790137 41 GCCTGTGATGCAGGAGGAGATCTTCGGGCCCATCCTGCCCA GCCTGTGATGCAGGAGGAGATATTCGGGCCCATCCTGCCCA < 41bp 0.494398063234762 0.830215739727169 0.62113637 0.64013016 prediction 0.660431479454338 Functional Gain - ALDH3B1 ENSG00000006534 CDS Human protein_coding chr11:67790117 chr11:67790118 synonymous SNV . 0 22 hPsi_associated_SNPs_26899 0 0 0 0 1 Ribosome 0.438710571387809 0.438733550115506 0.03798758 0 hPsi_site_20623 iPseU_CNN:0.03798758;iRNA_PseU:0 20624 chr4 120325630 120325630 1 + G A rs35165976 120325629 + 120325609 120325649 41 AAACCTTGGAGAAGAAAATGTGTGCATAGCGGGTCCACTGC AAACCTTGGAGAAGAAAATGTATGCATAGCGGGTCCACTGC < 41bp 0.441533273947183 0.830211921496077 0.35539922 0.5792184 prediction 0.660423842992154 Functional Gain - FABP2;LINC01061 ENSG00000249244;ENSG00000260091 intergenic Human other chr4:120325629 chr4:120325630 . . 0 22 hPsi_associated_SNPs_26900 0 0 0 0 0 unknown 0.438718359511197 0.438722439812062 0.1584368 0 hPsi_site_20624 iPseU_CNN:0.1584368;iRNA_PseU:0 20625 chr12 50222442 50222442 1 + G A rs527337022 50222441 + 50222421 50222461 41 TCTCCAGGCCGGGCCGGGCTTGGTAAACCTCAGCCGTGCCT TCTCCAGGCCGGGCCGGGCTTAGTAAACCTCAGCCGTGCCT < 41bp 0.440983537206094 0.830208772620424 0.3299517 0.65044224 prediction 0.660417545240849 Functional Gain - BCDIN3D-AS1 ENSG00000258057 ncRNA_exonic Human antisense chr12:50222441 chr12:50222442 . . 0 22 hPsi_associated_SNPs_26901 0 0 0 0 2 unknown 0.438718788818639 0.438718597656657 0.30088448 0 hPsi_site_20625 iPseU_CNN:0.30088448;iRNA_PseU:0 20626 chr6 26463660 26463660 1 + G A rs13195509 26463659 + 26463639 26463679 41 CTCTTCATGGTCACCACGGCTGTGATCATCAGAGACAAGTC CTCTTCATGGTCACCACGGCTATGATCATCAGAGACAAGTC < 41bp 0.415988316206406 0.830201631009405 0.17994425 0.30755067 prediction 0.660403262018811 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26463659 chr6:26463660 nonsynonymous SNV 0.516 2 22 hPsi_associated_SNPs_26902 0 0 0 0 1 Endoplasmic reticulum 0.438623908009318 0.438847452361904 0 0 hPsi_site_20626 iPseU_CNN:0;iRNA_PseU:0 20627 chr3 178543464 178543464 1 + C A COAD 178543463 + 178543443 178543483 41 GCAGGAGAGGACCGAGCTATTCTCCTGGGACTGGCTATGAT GCAGGAGAGGACCGAGCTATTATCCTGGGACTGGCTATGAT < 41bp 0.4838010809505 0.83020106112984 0.32724202 0.7021869 prediction 0.66040212225968 Functional Gain - KCNMB2 ENSG00000197584 CDS Human protein_coding chr3:178543463 chr3:178543464 nonsynonymous SNV 0.910 4 22 hPsi_associated_SNPs_26903 0 0 0 0 3 chromatin 0.438718569254465 0.43871644197885 0.4043738 0 hPsi_site_20627 iPseU_CNN:0.4043738;iRNA_PseU:0 20628 chr17 685717 685717 1 + G A LUSC 685716 + 685696 685736 41 GAGGCGCTGGGTCCGGGCGCTGCGGCGGAGCCCAGTGAAAG GAGGCGCTGGGTCCGGGCGCTACGGCGGAGCCCAGTGAAAG < 41bp 0.430645276525405 0.830198860821378 0.2837686 0.70066285 prediction 0.660397721642757 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:685716 chr17:685717 synonymous SNV . 0 22 hPsi_associated_SNPs_26904 0 0 1 0 0 chromatin 0.438719698302165 0.438578233612995 0.4013257 0 hPsi_site_20628 iPseU_CNN:0.4013257;iRNA_PseU:0 20629 chr14 31344162 31344162 1 + C A UCEC 31344161 + 31344141 31344181 41 CACCATGTCCGCAGCCTGGATCCCGGCTCTCGGCCTCGGTG CACCATGTCCGCAGCCTGGATACCGGCTCTCGGCCTCGGTG < 41bp 0.498543489570582 0.830188892926992 0.371835 0.86239135 prediction 0.660377785853983 Functional Gain - COCH ENSG00000100473 CDS Human protein_coding chr14:31344161 chr14:31344162 synonymous SNV . 0 22 hPsi_associated_SNPs_26905 0 0 1 0 2 Cytosol 0.438718779828222 0.438718638222441 0.7247827 0 hPsi_site_20629 iPseU_CNN:0.7247827;iRNA_PseU:0 20630 chr8 67047317 67047317 1 + C A LUSC 67047316 + 67047296 67047336 41 ACTGCGAAGTACCCACCTGCTCTCTGTGCAAGGTGTTTGGT ACTGCGAAGTACCCACCTGCTATCTGTGCAAGGTGTTTGGT < 41bp 0.455161834274496 0.830183976339586 0.27899712 0.6157562 prediction 0.660367952679172 Functional Gain - TRIM55 ENSG00000147573 CDS Human protein_coding chr8:67047316 chr8:67047317 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_26906 0 0 0 0 2 exosome 0.439117403622062 0.438352529070715 0.2315124 0 hPsi_site_20630 iPseU_CNN:0.2315124;iRNA_PseU:0 20631 chr5 134117736 134117736 1 + C A UCEC 134117735 + 134117715 134117755 41 TGAGCCATTTAGGAAAAACTTCTATGTTGAAGTTCCAGAAC TGAGCCATTTAGGAAAAACTTATATGTTGAAGTTCCAGAAC < 41bp 0.503566337655221 0.833745839308639 0.29878682 0.29932564 prediction 0.660359003306837 Functional Gain - DDX46 ENSG00000145833 CDS Human protein_coding chr5:134117735 chr5:134117736 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_26907 0 0 1 3 1 Cytosol 0.43842722552872 0.438713823207762 0 0 hPsi_site_20631 iPseU_CNN:0;iRNA_PseU:0 20632 chrX 102192654 102192654 1 + G A UCEC 102192653 + 102192633 102192673 41 TCTGGCATTCAAGAGGCAGGTGCCCAGGGAGCAGGCCCAGG TCTGGCATTCAAGAGGCAGGTACCCAGGGAGCAGGCCCAGG < 41bp 0.560363657705528 0.890539637266568 0.22471645 0.6523541 prediction 0.660351959122081 Functional Gain - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192653 chrX:102192654 synonymous SNV . 0 22 hPsi_associated_SNPs_26908 0 0 0 0 0 exosome 0.438718592995856 0.438718592995533 0.3047082 0 hPsi_site_20632 iPseU_CNN:0.3047082;iRNA_PseU:0 20633 chrX 64721903 64721903 1 + C A UCEC 64721902 + 64721882 64721922 41 AATCAGATCCCAGCATCCGGTCTGTGGCTATGGAGCCTGAG AATCAGATCCCAGCATCCGGTATGTGGCTATGGAGCCTGAG < 41bp 0.476081062252595 0.830171486647878 0.30563933 0.6966155 prediction 0.660342973295756 Functional Gain - ZC3H12B ENSG00000102053 CDS Human protein_coding chrX:64721902 chrX:64721903 nonsynonymous SNV 0.981 4 22 hPsi_associated_SNPs_26909 0 0 0 0 0 Endoplasmic reticulum 0.438718842555603 0.43871859333677 0.393231 0 hPsi_site_20633 iPseU_CNN:0.393231;iRNA_PseU:0 20634 chr2 143643039 143643039 1 + G A HNSC 143643038 + 143643018 143643058 41 AGGGTGGCTCTCCACCTAGATGAGGAAGATAAGCTGAGGCA AGGGTGGCTCTCCACCTAGATAAGGAAGATAAGCTGAGGCA < 41bp 0.424144097437823 0.830171274338337 0.27641296 0.42038995 prediction 0.660342548676674 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143643038 chr2:143643039 nonsynonymous SNV 0.925 0 22 hPsi_associated_SNPs_26910 0 0 1 0 1 Nucleus 0.438716103841331 0.438718598342955 0 0 hPsi_site_20634 iPseU_CNN:0;iRNA_PseU:0 20635 chr5 34869096 34869096 1 + G A UCEC 34869095 + 34869075 34869115 41 ACTGGCCAAAGCTTATGCCATGTCTGGAGAGGCCCAGCACA ACTGGCCAAAGCTTATGCCATATCTGGAGAGGCCCAGCACA < 41bp 0.525308854121862 0.855479917670777 0.17326054 0.27302718 prediction 0.66034212709783 Functional Gain - TTC23L ENSG00000205838 CDS Human protein_coding chr5:34869095 chr5:34869096 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_26911 0 0 0 0 2 chromatin 0.438705196200663 0.438575898259975 0 0 hPsi_site_20635 iPseU_CNN:0;iRNA_PseU:0 20636 chr3 58255096 58255096 1 + G A BLCA 58255095 + 58255075 58255115 41 TGCGTGGACATGCCAGGACATGAGGGCACCACCCGCTCCTC TGCGTGGACATGCCAGGACATAAGGGCACCACCCGCTCCTC < 41bp 0.41093238750755 0.830168036553361 0.21162906 0.28952056 prediction 0.660336073106722 Functional Gain - ABHD6 ENSG00000163686 CDS Human protein_coding chr3:58255095 chr3:58255096 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_26912 0 0 0 0 2 Ribosome 0.438718786204364 0.438718593268909 0 0 hPsi_site_20636 iPseU_CNN:0;iRNA_PseU:0 20637 chr7 94184934 94184934 1 + C A READ 94184933 + 94184913 94184953 41 TTTGTGTGGCACATGAAATTTCTCAGATCACTAATGATCTT TTTGTGTGGCACATGAAATTTATCAGATCACTAATGATCTT < 41bp 0.508505379361292 0.838666099882689 0.27263838 0.27469456 prediction 0.660321441042794 Functional Gain - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94184933 chr7:94184934 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_26913 0 0 1 0 0 Cytosol 0.437446447521258 0.438517147739567 0 0 hPsi_site_20637 iPseU_CNN:0;iRNA_PseU:0 20638 chr16 26147239 26147239 1 + C A LUAD 26147238 + 26147218 26147258 41 GGAAAACTGGCTCCAGTATTTCCCCCTCTCCCAGATCCTCT GGAAAACTGGCTCCAGTATTTACCCCTCTCCCAGATCCTCT < 41bp 0.494375960565636 0.830159295392227 0.17547536 0.42871642 prediction 0.660318590784454 Functional Gain - HS3ST4 ENSG00000182601 CDS Human protein_coding chr16:26147238 chr16:26147239 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_26914 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_20638 iPseU_CNN:0;iRNA_PseU:0 20639 chr12 131851997 131851997 1 + G A rs11061486 131851996 + 131851976 131852016 41 TGAGGGTCCCCGTGAGGCCATGCGGGGCACTCCACAGAAGC TGAGGGTCCCCGTGAGGCCATACGGGGCACTCCACAGAAGC < 41bp 0.482919251106044 0.830158979521776 0.2713331 0.6162194 prediction 0.660317959043552 Functional Gain - LINC02370 ENSG00000230294 ncRNA_exonic Human lincRNA chr12:131851996 chr12:131851997 . . 0 22 hPsi_associated_SNPs_26915 0 0 0 0 0 unknown 0.438718635127886 0.438720429650664 0.2324388 0 hPsi_site_20639 iPseU_CNN:0.2324388;iRNA_PseU:0 20640 chr1 248084434 248084434 1 + G A rs11204563 248084433 + 248084413 248084453 41 ATCGTTTTGACCTCCCTGTTTGGCAATTCCCTCATGATTCT ATCGTTTTGACCTCCCTGTTTAGCAATTCCCTCATGATTCT < 41bp 0.450294738835192 0.830156579100008 0.28770372 0.65330434 prediction 0.660313158200016 Functional Gain - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248084433 chr1:248084434 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_26916 0 0 0 0 0 exosome 0.438717945888988 0.438718592796242 0.30660868 0 hPsi_site_20640 iPseU_CNN:0.30660868;iRNA_PseU:0 20641 chr5 177574567 177574567 1 + G A CESC 177574566 + 177574546 177574586 41 CTGTGTGGCGCTGCCTGTGTTGATGAACATCAAGGCTGTGA CTGTGTGGCGCTGCCTGTGTTAATGAACATCAAGGCTGTGA < 41bp 0.572440602013438 0.9025970115411 0.32403034 0.69007194 prediction 0.660312819055325 Functional Gain - RMND5B ENSG00000145916 CDS Human protein_coding chr5:177574566 chr5:177574567 synonymous SNV . 0 22 hPsi_associated_SNPs_26917 0 0 1 0 2 Cytosol 0.439031994217305 0.438719996668738 0.38014388 0 hPsi_site_20641 iPseU_CNN:0.38014388;iRNA_PseU:0 20642 chr5 53815066 53815066 1 + C A rs2548613 53815065 + 53815045 53815085 41 GCAGGAGGTGGAGAGCAAGATCGACGGCTTCAAGTGCTTCA GCAGGAGGTGGAGAGCAAGATAGACGGCTTCAAGTGCTTCA < 41bp 0.523425394403187 0.853578044812356 0.24574637 0.42350155 prediction 0.660305300818338 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815065 chr5:53815066 synonymous SNV . 0 22 hPsi_associated_SNPs_26918 0 0 0 0 0 chromatin 0.438649939507735 0.438708082725983 0 0 hPsi_site_20642 iPseU_CNN:0;iRNA_PseU:0 20643 chr22 39909836 39909836 1 + G A COAD 39909835 + 39909815 39909855 41 AGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAAC AGAAGCCCTCACACTGGAGGTACAGTATGAGCGTGACAAAC < 41bp 0.564914325795728 0.895063812024921 0.23430184 0.4479327 prediction 0.660298972458385 Functional Gain - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39909835 chr22:39909836 synonymous SNV . 0 22 hPsi_associated_SNPs_26919 0 0 1 0 0 chromatin 0.438718696165073 0.438715503693923 0 0 hPsi_site_20643 iPseU_CNN:0;iRNA_PseU:0 20644 chr17 4442301 4442301 1 + G A rs199695378 4442300 + 4442280 4442320 41 GAAGCCAAATATATTCCTCTTGTAAATGAAGAAATAAACCT GAAGCCAAATATATTCCTCTTATAAATGAAGAAATAAACCT < 41bp 0.529451244910261 0.859598576261313 0.30455932 0.30938584 prediction 0.660294662702103 Functional Gain - MYBBP1A;SPNS2 ENSG00000132382;ENSG00000183018 UTR3 Human other chr17:4442300 chr17:4442301 . . 0 22 hPsi_associated_SNPs_26920 0 0 0 4 0 unknown 0.438719046080701 0.438718584879182 0 0 hPsi_site_20644 iPseU_CNN:0;iRNA_PseU:0 20645 chr6 117890832 117890832 1 + C A OV 117890833 - 117890813 117890853 41 CGGGGCAACCTGCTGATAGATGCGGAGGGCTGCACGTTGGG CGGGGCAACCTGCTGATAGATTCGGAGGGCTGCACGTTGGG < 41bp 0.493946167768813 0.830145666375628 0.29431307 0.81455225 prediction 0.660291332751257 Functional Gain - GOPC ENSG00000047932 CDS Human protein_coding chr6:117890833 chr6:117890832 nonsynonymous SNV 0.651 4 22 hPsi_associated_SNPs_26921 0 0 1 0 1 Ribosome 0.438718592834898 0.438718592995031 0.6291045 0 hPsi_site_20645 iPseU_CNN:0.6291045;iRNA_PseU:0 20646 chr18 32825376 32825376 1 + C A UCEC 32825375 + 32825355 32825395 41 CTACAGGGGAGAAACTAAGATCTCCTTCCCAAGGGGGCAGT CTACAGGGGAGAAACTAAGATATCCTTCCCAAGGGGGCAGT < 41bp 0.518236009349246 0.848373248272487 0.2723202 0.3139155 prediction 0.660274477846482 Functional Gain - ZNF397 ENSG00000186812 CDS Human protein_coding chr18:32825375 chr18:32825376 nonsynonymous SNV 0.917 1 22 hPsi_associated_SNPs_26922 0 0 1 0 0 Ribosome 0.438718590881858 0.438718558789948 0 0 hPsi_site_20646 iPseU_CNN:0;iRNA_PseU:0 20647 chr11 63995105 63995105 1 + C A UCEC 63995104 + 63995084 63995124 41 GCAGCTGGTGGTACATGAACTCTTTTCCAGTGTCCTTCAGG GCAGCTGGTGGTACATGAACTATTTTCCAGTGTCCTTCAGG < 41bp 0.529439319861964 0.859574756205504 0.32852146 0.55051935 prediction 0.660270872687079 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63995104 chr11:63995105 synonymous SNV . 0 22 hPsi_associated_SNPs_26923 0 0 1 0 2 Ribosome 0.438118981436882 0.438583374613429 0.1010387 0 hPsi_site_20647 iPseU_CNN:0.1010387;iRNA_PseU:0 20648 chr20 372179 372179 1 + G A HNSC 372178 + 372158 372198 41 TCACCAGCACGGTCTGGTCCTGCGTGATCTCAAGCTGTGTC TCACCAGCACGGTCTGGTCCTACGTGATCTCAAGCTGTGTC < 41bp 0.407211744408416 0.830129851276364 0.23067507 0.7365866 prediction 0.660259702552728 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:372178 chr20:372179 synonymous SNV . 0 22 hPsi_associated_SNPs_26924 0 0 1 0 1 Ribosome 0.437013977492818 0.438301816381162 0.4731732 0 hPsi_site_20648 iPseU_CNN:0.4731732;iRNA_PseU:0 20649 chr4 106650626 106650626 1 + G A CESC 106650625 + 106650605 106650645 41 ACTTGGACTCTTGATTGGAATGTTCTCCCTGCAGCAGTCAG ACTTGGACTCTTGATTGGAATATTCTCCCTGCAGCAGTCAG < 41bp 0.431310111768132 0.830123562354541 0.5188681 0.616428 prediction 0.660247124709081 Functional Gain - GSTCD ENSG00000138780 CDS Human protein_coding chr4:106650625 chr4:106650626 nonsynonymous SNV 0.852 0 22 hPsi_associated_SNPs_26925 0 0 1 0 2 Ribosome 0.438718506250328 0.43871853812591 0.1951198 0 hPsi_site_20649 iPseU_CNN:0.1951198;iRNA_PseU:0 20650 chr1 46739098 46739098 1 + C A LUAD 46739097 + 46739077 46739117 41 GGTGCCTTGGACCTCTTCCCTCCTGGTTACAGCTCTAAGGC GGTGCCTTGGACCTCTTCCCTACTGGTTACAGCTCTAAGGC < 41bp 0.539671830701474 0.869794027229699 0.25883478 0.35494226 prediction 0.660244393056449 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739097 chr1:46739098 nonsynonymous SNV 0.716 1 22 hPsi_associated_SNPs_26926 0 0 1 0 2 Ribosome 0.438718592549331 0.438718642709343 0 0 hPsi_site_20650 iPseU_CNN:0;iRNA_PseU:0 20651 chr19 51986512 51986512 1 + G A BLCA 51986511 + 51986491 51986531 41 GGAGAACCCCGTGACACAGCTGATCATGTACATGGACGTCA GGAGAACCCCGTGACACAGCTAATCATGTACATGGACGTCA < 41bp 0.427526991102553 0.830121313919933 0.36421794 0.6638946 prediction 0.660242627839867 Functional Gain - CEACAM18 ENSG00000213822 CDS Human protein_coding chr19:51986511 chr19:51986512 synonymous SNV . 0 22 hPsi_associated_SNPs_26927 0 0 0 0 0 unknown 0.43863556140681 0.438772495849663 0.3277892 0 hPsi_site_20651 iPseU_CNN:0.3277892;iRNA_PseU:0 20652 chr10 99350251 99350251 1 + C A COAD 99350250 + 99350230 99350270 41 TGCCAATCACACACACACCTTCTATGGCCACAGTCACCACA TGCCAATCACACACACACCTTATATGGCCACAGTCACCACA < 41bp 0.490648202546187 0.830119908220988 0.816729 0.70401406 prediction 0.660239816441976 Functional Gain - C10orf62 ENSG00000203942 CDS Human protein_coding chr10:99350250 chr10:99350251 nonsynonymous SNV 0.106 0 22 hPsi_associated_SNPs_26928 0 0 0 0 0 unknown 0.438614277945127 0.429962096823842 0 0 hPsi_site_20652 iPseU_CNN:0;iRNA_PseU:0 20653 chrX 131207060 131207060 1 + G A CESC 131207059 + 131207039 131207079 41 GAGAAAAGTATTGCTGTGGCTGAAGCCGCCTGTCCCGGCAT GAGAAAAGTATTGCTGTGGCTAAAGCCGCCTGTCCCGGCAT < 41bp 0.561944422642708 0.892059922623884 0.63775176 0.76221067 prediction 0.660230999962352 Functional Gain - STK26 ENSG00000134602 CDS Human protein_coding chrX:131207059 chrX:131207060 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_26929 0 0 1 0 3 Ribosome 0.438720721679406 0.438719087270027 0.24891782 0 hPsi_site_20653 iPseU_CNN:0.24891782;iRNA_PseU:0 20654 chr14 21552197 21552197 1 + G A UCEC 21552196 + 21552176 21552216 41 CCTGCTGGCCGTGGAGGCGGTGCGTGGCTGTGAGGTGAGGC CCTGCTGGCCGTGGAGGCGGTACGTGGCTGTGAGGTGAGGC < 41bp 0.422626804980582 0.830111135809141 0.30998522 0.7595463 prediction 0.660222271618282 Functional Gain - ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21552196 chr14:21552197 synonymous SNV . 0 22 hPsi_associated_SNPs_26930 0 0 1 0 1 Cytosol 0.438718592974755 0.438718592838935 0.5190926 0 hPsi_site_20654 iPseU_CNN:0.5190926;iRNA_PseU:0 20655 chr11 123777604 123777604 1 + G A LUSC 123777603 + 123777583 123777623 41 TTCTCAGTAGGTTTCACTGATGCTGTGATCCATGGAGGTTG TTCTCAGTAGGTTTCACTGATACTGTGATCCATGGAGGTTG < 41bp 0.450737600600044 0.830095939096264 0.20400819 0.25334328 prediction 0.660191878192528 Functional Gain - OR8D4 ENSG00000181518 CDS Human protein_coding chr11:123777603 chr11:123777604 nonsynonymous SNV 0.903 3 22 hPsi_associated_SNPs_26931 0 0 0 0 0 unknown 0.438718420693756 0.438726844574106 0 0 hPsi_site_20655 iPseU_CNN:0;iRNA_PseU:0 20656 chr19 40698304 40698304 1 + G A LIHC 40698303 + 40698283 40698323 41 CCTGTGGCGTGGCGAGGAGGTGGCAGTCAAGGCCGCCCGGC CCTGTGGCGTGGCGAGGAGGTAGCAGTCAAGGCCGCCCGGC < 41bp 0.563534026777675 0.893622834910388 0.27062476 0.61691767 prediction 0.660177616265426 Functional Gain - MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40698303 chr19:40698304 synonymous SNV . 0 22 hPsi_associated_SNPs_26932 0 0 1 0 0 Endoplasmic reticulum 0.439388979586177 0.438722247801886 0.23383534 0 hPsi_site_20656 iPseU_CNN:0.23383534;iRNA_PseU:0 20657 chr2 131487042 131487042 1 + C A COAD 131487041 + 131487021 131487061 41 CATTCTCCTCCACATGCTCATCTCCTCCAGCAGCCTGGGTG CATTCTCCTCCACATGCTCATATCCTCCAGCAGCCTGGGTG < 41bp 0.519995708736617 0.85007503744418 0.26305985 0.4529849 prediction 0.660158657415124 Functional Gain - GPR148 ENSG00000173302 CDS Human protein_coding chr2:131487041 chr2:131487042 synonymous SNV . 0 22 hPsi_associated_SNPs_26933 0 0 0 0 0 unknown 0.438713548137464 0.438695541157702 0 0 hPsi_site_20657 iPseU_CNN:0;iRNA_PseU:0 20658 chr1 43738664 43738664 1 + G A LUSC 43738663 + 43738643 43738683 41 AAACAGCTGATGAGCTCGGCTGTGCAGGACATGAACTGCAT AAACAGCTGATGAGCTCGGCTATGCAGGACATGAACTGCAT < 41bp 0.562986343966767 0.893050182868508 0.21077004 0.24636641 prediction 0.660127677803483 Functional Gain - TMEM125 ENSG00000179178 CDS Human protein_coding chr1:43738663 chr1:43738664 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_26934 0 0 0 0 0 Ribosome 0.438396701471943 0.438561075629635 0 0 hPsi_site_20658 iPseU_CNN:0;iRNA_PseU:0 20659 chr5 76028893 76028893 1 + G A BRCA 76028892 + 76028872 76028912 41 CTCTGCTGTCTTCTTTTTTGTGCCGCTGATCATTTCCACGG CTCTGCTGTCTTCTTTTTTGTACCGCTGATCATTTCCACGG < 41bp 0.444707847518942 0.830062499834773 0.16109976 0.28267664 prediction 0.660124999669545 Functional Gain - F2R ENSG00000181104 CDS Human protein_coding chr5:76028892 chr5:76028893 synonymous SNV . 0 22 hPsi_associated_SNPs_26935 0 0 1 0 0 Endoplasmic reticulum 0.438718640282165 0.439103824737867 0 0 hPsi_site_20659 iPseU_CNN:0;iRNA_PseU:0 20660 chr9 127982846 127982846 1 + G T OV 127982845 + 127982825 127982865 41 GACGTGGACCACGCCAGAAGTGACCAGCCCCCCACCATCCC GACGTGGACCACGCCAGAAGTTACCAGCCCCCCACCATCCC < 41bp 0.497200579183911 0.830058211442244 0.19774854 0.20531774 prediction 0.660116422884489 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982845 chr9:127982846 stoploss 0.663 0 22 hPsi_associated_SNPs_26936 0 0 0 0 1 Cytosol 0.438844556912712 0.438716962933258 0 0 hPsi_site_20660 iPseU_CNN:0;iRNA_PseU:0 20661 chr5 179036433 179036433 1 + G A rs17355294 179036432 + 179036412 179036452 41 CACCTGCTCCAGCAACGAGCTGGCCCTGCCCTCCTACCCCA CACCTGCTCCAGCAACGAGCTAGCCCTGCCCTCCTACCCCA < 41bp 0.421695839828588 0.830057729666522 0.18210948 0.286547 prediction 0.660115459333044 Functional Gain - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179036432 chr5:179036433 synonymous SNV . 0 22 hPsi_associated_SNPs_26937 0 0 1 0 1 Ribosome 0.438718593119164 0.438718592995463 0 0 hPsi_site_20661 iPseU_CNN:0;iRNA_PseU:0 20662 chr2 10924435 10924435 1 + G A COAD 10924434 + 10924414 10924454 41 CTCCACATCACTGAGGTCAATGTCATCCTCCACGGGAAGCT CTCCACATCACTGAGGTCAATATCATCCTCCACGGGAAGCT < 41bp 0.550113836865819 0.880171001099639 0.27526802 0.41990322 prediction 0.660114328467639 Functional Gain - PDIA6 ENSG00000143870 CDS Human protein_coding chr2:10924434 chr2:10924435 synonymous SNV . 0 22 hPsi_associated_SNPs_26938 0 0 0 0 0 Ribosome 0.438718754233288 0.438718720790776 0 0 hPsi_site_20662 iPseU_CNN:0;iRNA_PseU:0 20663 chr11 18723139 18723139 1 + G A STAD 18723138 + 18723118 18723158 41 AGGTCTGCTGATGTTTGCTGTGACCCACATGTTCTACGCCT AGGTCTGCTGATGTTTGCTGTAACCCACATGTTCTACGCCT < 41bp 0.42037728407433 0.830054895041731 0.2701015 0.39159104 prediction 0.660109790083461 Functional Gain - TMEM86A ENSG00000151117 CDS Human protein_coding chr11:18723138 chr11:18723139 synonymous SNV . 0 22 hPsi_associated_SNPs_26939 0 0 0 0 1 Endoplasmic reticulum 0.301436450994568 0.438510383235559 0 0 hPsi_site_20663 iPseU_CNN:0;iRNA_PseU:0 20664 chr17 57287899 57287899 1 + C A UCEC 57287898 + 57287878 57287918 41 ATCTGTGACAATTCACAGCTTCTCCGGGCTTGTCGGGCTCT ATCTGTGACAATTCACAGCTTATCCGGGCTTGTCGGGCTCT < 41bp 0.526473509161635 0.856524232619035 0.3268432 0.29072505 prediction 0.6601014469148 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287898 chr17:57287899 nonsynonymous SNV 0.972 1 22 hPsi_associated_SNPs_26940 0 0 1 0 0 chromatin 0.438718592991111 0.438713518411523 0 0 hPsi_site_20664 iPseU_CNN:0;iRNA_PseU:0 20665 chr1 154310027 154310027 1 + G A CESC 154310026 + 154310006 154310046 41 TTCACTCTATGTCAGGTATGTGCCTTCTCTGACCTGGGGTC TTCACTCTATGTCAGGTATGTACCTTCTCTGACCTGGGGTC < 41bp 0.561894419170852 0.891941098612154 0.26247776 0.57667655 prediction 0.660093358882606 Functional Gain - ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154310026 chr1:154310027 synonymous SNV . 0 22 hPsi_associated_SNPs_26941 0 0 1 0 0 chromatin 0.438720194477696 0.438718793567867 0.1533531 0 hPsi_site_20665 iPseU_CNN:0.1533531;iRNA_PseU:0 20666 chr17 76415647 76415647 1 + G A SKCM 76415646 + 76415626 76415666 41 GGAGCAAGAGCAGCTCTACCTGAGGTCAGGTGTGGTGTCCT GGAGCAAGAGCAGCTCTACCTAAGGTCAGGTGTGGTGTCCT < 41bp 0.423933909398554 0.83004558799662 0.18623018 0.27908716 prediction 0.660091175993239 Functional Gain - PGS1 ENSG00000087157 CDS Human protein_coding chr17:76415646 chr17:76415647 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_26942 0 0 1 1 1 chromatin 0.438718592968837 0.438718592975362 0 0 hPsi_site_20666 iPseU_CNN:0;iRNA_PseU:0 20667 chr17 14205134 14205134 1 + C A CESC 14205133 + 14205113 14205153 41 CGCCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAG CGCCAGCCACCCCACTGGCTTAAGGCAAGGAGATGGCCGAG < 41bp 0.488005902318493 0.830044589364111 0.23593327 0.5632179 prediction 0.660089178728222 Functional Gain - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14205133 chr17:14205134 stopgain 0.004 0 22 hPsi_associated_SNPs_26943 0 0 0 0 0 Endoplasmic reticulum 0.438647461816988 0.438720364695273 0.1264358 0 hPsi_site_20667 iPseU_CNN:0.1264358;iRNA_PseU:0 20668 chr17 39846406 39846406 1 + G A LUAD 39846405 + 39846385 39846425 41 GAAGTAATTCAGCTACAGGGTGACCAACGCAAGAACATATG GAAGTAATTCAGCTACAGGGTAACCAACGCAAGAACATATG < 41bp 0.570293752376113 0.900337238875155 0.26884565 0.7137097 prediction 0.660086972998084 Functional Gain - EIF1 ENSG00000173812 CDS Human protein_coding chr17:39846405 chr17:39846406 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26944 0 0 1 2 2 Endoplasmic reticulum 0.438719164655835 0.438747202814746 0.4274194 0 hPsi_site_20668 iPseU_CNN:0.4274194;iRNA_PseU:0 20669 chr19 39905798 39905798 1 + G A SKCM 39905797 + 39905777 39905817 41 CCGCCTACATCTCTCTCCGGTGGGGATCCCAGGTTCAGCCA CCGCCTACATCTCTCTCCGGTAGGGATCCCAGGTTCAGCCA < 41bp 0.410392640518441 0.830043431468507 0.262403 0.29551232 prediction 0.660086862937014 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39905797 chr19:39905798 synonymous SNV . 0 22 hPsi_associated_SNPs_26945 0 0 1 0 0 Nucleus 0.438718592995007 0.438718593137096 0 0 hPsi_site_20669 iPseU_CNN:0;iRNA_PseU:0 20670 chr16 20787220 20787220 1 + G T SARC 20787219 + 20787199 20787239 41 CAACAGAAATGGAGAAGAGATGCGATGGAGTTTTGAGGAAC CAACAGAAATGGAGAAGAGATTCGATGGAGTTTTGAGGAAC < 41bp 0.499476077339671 0.830040479451681 0.2591974 0.42151868 prediction 0.660080958903362 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787219 chr16:20787220 nonsynonymous SNV 0.912 0 22 hPsi_associated_SNPs_26946 0 0 1 0 1 Endoplasmic reticulum 0.436524509460886 0.440633856929525 0 0 hPsi_site_20670 iPseU_CNN:0;iRNA_PseU:0 20671 chr11 61722645 61722645 1 + C A rs1109748 61722644 + 61722624 61722664 41 TCTGTATTGCGACAGCTACATCCAGCTCATCCCCATTTCCT TCTGTATTGCGACAGCTACATACAGCTCATCCCCATTTCCT < 41bp 0.476914161916716 0.830037713166702 0.15183342 0.5484293 prediction 0.660075426333404 Functional Gain - BEST1 ENSG00000167995 CDS Human protein_coding chr11:61722644 chr11:61722645 synonymous SNV . 0 22 hPsi_associated_SNPs_26947 5 1 0 0 1 chromatin 0.438718527603805 0.434040428164551 0.0968586 0 hPsi_site_20671 iPseU_CNN:0.0968586;iRNA_PseU:0 20672 chr17 7612893 7612893 1 + G A BLCA 7612892 + 7612872 7612912 41 CAAACATCTACTACAAGGTATGAGGGCTCCTCTCACGTGGC CAAACATCTACTACAAGGTATAAGGGCTCCTCTCACGTGGC < 41bp 0.560234216457093 0.890267825542128 0.6438708 0.8221094 prediction 0.66006721817007 Functional Gain - EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7612892 chr17:7612893 synonymous SNV . 0 22 hPsi_associated_SNPs_26948 0 0 0 0 0 exosome 0.438719224071101 0.438718592851759 0.3564772 0 hPsi_site_20672 iPseU_CNN:0.3564772;iRNA_PseU:0 20673 chrX 130222644 130222644 1 + C A OV 130222643 + 130222623 130222663 41 TGCCTTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGGA TGCCTTCCGGCACTGCCCGTTACCATGACGATGAGGAAGGA < 41bp 0.529877343624235 0.859909093545047 0.28197116 0.78896654 prediction 0.660063499841623 Functional Gain - ARHGAP36 ENSG00000147256 CDS Human protein_coding chrX:130222643 chrX:130222644 nonsynonymous SNV 0.613 0 22 hPsi_associated_SNPs_26949 0 0 0 0 1 unknown 0.438718567077994 0.438706793384657 0.57793308 0 hPsi_site_20673 iPseU_CNN:0.57793308;iRNA_PseU:0 20674 chr10 90762815 90762815 1 + C T SKCM 90762816 - 90762796 90762836 41 CACTTGGGCATTAACACTTTTGGACGATAATCTAGCAACAG CACTTGGGCATTAACACTTTTAGACGATAATCTAGCAACAG < 41bp 0.529414575570498 0.859443481556047 0.24135116 0.33090347 prediction 0.660057811971098 Functional Gain - FAS ENSG00000026103 CDS Human protein_coding chr10:90762816 chr10:90762815 synonymous SNV . 0 22 hPsi_associated_SNPs_26950 0 0 0 0 0 exosome 0.438737206329203 0.43869363913819 0 0 hPsi_site_20674 iPseU_CNN:0;iRNA_PseU:0 20675 chr10 51769970 51769970 1 + C A rs549858590 51769969 + 51769949 51769989 41 TCTGTTTTATTTGACTGCAGTCTCCTTGGTGCAAAAACAAA TCTGTTTTATTTGACTGCAGTATCCTTGGTGCAAAAACAAA < 41bp 0.498545050693146 0.830028763898274 0.15667975 0.21553516 prediction 0.660057527796549 Functional Gain - AGAP6 ENSG00000204149 UTR3 Human protein_coding chr10:51769969 chr10:51769970 . . 0 22 hPsi_associated_SNPs_26951 0 0 1 6 0 chromatin 0.438718626890336 0.438721748925491 0 0 hPsi_site_20675 iPseU_CNN:0;iRNA_PseU:0 20676 chr1 248039704 248039704 1 + G A OV 248039703 + 248039683 248039723 41 TGATGCAACTCCTCTTATCTTGCCACCCACAACAATAGCAG TGATGCAACTCCTCTTATCTTACCACCCACAACAATAGCAG < 41bp 0.555963567379246 0.885991932049447 0.1556293 0.33774066 prediction 0.660056729340403 Functional Gain - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248039703 chr1:248039704 synonymous SNV . 0 22 hPsi_associated_SNPs_26952 0 0 1 0 0 Cytosol 0.438691525647279 0.437911679470243 0 0 hPsi_site_20676 iPseU_CNN:0;iRNA_PseU:0 20677 chr17 56271125 56271125 1 + G A COAD 56271124 + 56271104 56271144 41 CTGTCCCAGGCCAGTGGCTGTGCTCTCCGGGACCAGGCCGA CTGTCCCAGGCCAGTGGCTGTACTCTCCGGGACCAGGCCGA < 41bp 0.403078084945916 0.830023145470834 0.3325734 0.8047788 prediction 0.660046290941668 Functional Gain - EPX ENSG00000121053 CDS Human protein_coding chr17:56271124 chr17:56271125 nonsynonymous SNV 0.966 0 22 hPsi_associated_SNPs_26953 0 0 0 0 2 chromatin 0.438714521537365 0.438704560102532 0.6095576 0 hPsi_site_20677 iPseU_CNN:0.6095576;iRNA_PseU:0 20678 chr10 45499483 45499483 1 + C A UCEC 45499482 + 45499462 45499502 41 GGAAGGAAGTCTGTGGCTGGTCTCCGTTAAGTATAGGGCTT GGAAGGAAGTCTGTGGCTGGTATCCGTTAAGTATAGGGCTT < 41bp 0.485880726337908 0.830020777562265 0.17515945 0.4253083 prediction 0.660041555124531 Functional Gain - ZNF22 ENSG00000165512 CDS Human protein_coding chr10:45499482 chr10:45499483 nonsynonymous SNV 0.104 0 22 hPsi_associated_SNPs_26954 0 0 1 0 0 exosome 0.438718593744841 0.43871858489578 0 0 hPsi_site_20678 iPseU_CNN:0;iRNA_PseU:0 20679 chr5 169535234 169535234 1 + G A SKCM 169535233 + 169535213 169535253 41 CACGGAGCCTCAGGACATCTTGGATGGAGCCTCACCAGGGG CACGGAGCCTCAGGACATCTTAGATGGAGCCTCACCAGGGG < 41bp 0.419467152239531 0.830010752259361 0.34101933 0.65446997 prediction 0.660021504518722 Functional Gain - FOXI1 ENSG00000168269 CDS Human protein_coding chr5:169535233 chr5:169535234 synonymous SNV . 0 22 hPsi_associated_SNPs_26955 0 0 0 0 0 exosome 0.438718620594358 0.438717626230521 0.30893994 0 hPsi_site_20679 iPseU_CNN:0.30893994;iRNA_PseU:0 20680 chr16 698150 698150 1 + G A LUAD 698149 + 698129 698169 41 CCATTGACCTAGACGAGTGGTGGGCGCAGCAGTTCCTGGCG CCATTGACCTAGACGAGTGGTAGGCGCAGCAGTTCCTGGCG < 41bp 0.422818162039117 0.830010725457316 0.19899917 0.56187785 prediction 0.660021450914633 Functional Gain - MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:698149 chr16:698150 stopgain 1.000 0 22 hPsi_associated_SNPs_26956 0 0 1 1 1 Cytosol 0.438718811503063 0.438708207553713 0.1237557 0 hPsi_site_20680 iPseU_CNN:0.1237557;iRNA_PseU:0 20681 chr19 758354 758354 1 + C A UCEC 758353 + 758333 758373 41 GCCACGATGTCCCCGAGGCATCTCTCAGAATCCTCTGGAAA GCCACGATGTCCCCGAGGCATATCTCAGAATCCTCTGGAAA < 41bp 0.523174800320204 0.8531786313657 0.54763585 0.74014926 prediction 0.660007662090992 Functional Gain - MISP ENSG00000099812 CDS Human protein_coding chr19:758353 chr19:758354 nonsynonymous SNV 0.023 0 22 hPsi_associated_SNPs_26957 0 0 0 0 0 nucleus 0.438718592803961 0.438718706764266 0.38502682 0 hPsi_site_20681 iPseU_CNN:0.38502682;iRNA_PseU:0 20682 chr9 130996302 130996302 1 + C A LUSC 130996301 + 130996281 130996321 41 CCCTCCTGCCCTTCCCCAGCTCCAGCAGTACCCGCGGCTAC CCCTCCTGCCCTTCCCCAGCTACAGCAGTACCCGCGGCTAC < 41bp 0.464081997960497 0.82999850651833 0.34633535 0.4770147 prediction 0.659997013036659 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130996301 chr9:130996302 synonymous SNV . 0 22 hPsi_associated_SNPs_26958 0 0 1 0 2 Endoplasmic reticulum 0.43871859301254 0.438718543105673 0 0 hPsi_site_20682 iPseU_CNN:0;iRNA_PseU:0 20683 chrX 99901356 99901356 1 + C A UCEC 99901355 + 99901335 99901375 41 ACTCAAAGAGGAGCTCTCTTTCTGCTGTTCTTCCTAACTCC ACTCAAAGAGGAGCTCTCTTTATGCTGTTCTTCCTAACTCC < 41bp 0.531900882400431 0.861898197133353 0.3395604 0.31829774 prediction 0.659994629465845 Functional Gain - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99901355 chrX:99901356 nonsynonymous SNV 0.272 4 22 hPsi_associated_SNPs_26959 0 0 0 0 1 nucleus 0.438750869003558 0.438740807566819 0 0 hPsi_site_20683 iPseU_CNN:0;iRNA_PseU:0 20684 chr1 32829357 32829357 1 + G A COAD 32829356 + 32829336 32829376 41 GTCTTTGACTGCGTGCTGAATGGGGGGCCACTGCCTGAAAG GTCTTTGACTGCGTGCTGAATAGGGGGCCACTGCCTGAAAG < 41bp 0.431771920113703 0.829995330464308 0.3449018 0.682286 prediction 0.659990660928617 Functional Gain - TSSK3 ENSG00000162526 CDS Human protein_coding chr1:32829356 chr1:32829357 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_26960 0 0 0 0 0 chromatin 0.438718550437332 0.438718527115144 0.364572 0 hPsi_site_20684 iPseU_CNN:0.364572;iRNA_PseU:0 20685 chr2 173429274 173429274 1 + G A UCEC 173429273 + 173429253 173429293 41 ATCAGAAACCGACACAATGATGTCATTCCCACAATGGCCCA ATCAGAAACCGACACAATGATATCATTCCCACAATGGCCCA < 41bp 0.569864379281347 0.899858702473548 0.18782198 0.23970446 prediction 0.659988646384403 Functional Gain - PDK1 ENSG00000152256 CDS Human protein_coding chr2:173429273 chr2:173429274 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_26961 0 0 1 1 1 Ribosome 0.438693242971839 0.438606973983396 0 0 hPsi_site_20685 iPseU_CNN:0;iRNA_PseU:0 20686 chr5 145862239 145862239 1 + C A COAD 145862238 + 145862218 145862258 41 TGCCCGAGAAAGGGCCATTGTCCCTCTGGAGGCTCGAATGA TGCCCGAGAAAGGGCCATTGTACCTCTGGAGGCTCGAATGA < 41bp 0.455432031697179 0.829993562781443 0.21134767 0.39723808 prediction 0.659987125562886 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145862238 chr5:145862239 synonymous SNV . 0 22 hPsi_associated_SNPs_26962 0 0 1 0 2 Nucleus 0.438720285832455 0.438714898048423 0 0 hPsi_site_20686 iPseU_CNN:0;iRNA_PseU:0 20687 chr22 35661228 35661228 1 + G A LIHC 35661227 + 35661207 35661247 41 GAGTCCCACAGTGCTAACCTTGATCTTTCAGGGCTTGAACC GAGTCCCACAGTGCTAACCTTAATCTTTCAGGGCTTGAACC < 41bp 0.413985792364925 0.829985929581798 0.21131557 0.2540936 prediction 0.659971859163597 Functional Gain - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661227 chr22:35661228 nonsynonymous SNV 0.925 2 22 hPsi_associated_SNPs_26963 0 0 1 0 0 Ribosome 0.438690261721988 0.438718600730708 0 0 hPsi_site_20687 iPseU_CNN:0;iRNA_PseU:0 20688 chr16 57608958 57608958 1 + C A LUSC 57608957 + 57608937 57608977 41 CTTCTTTTCTTTTGGCGTCTTCCTGCTGCCCCAGCTGTTCC CTTCTTTTCTTTTGGCGTCTTACTGCTGCCCCAGCTGTTCC < 41bp 0.459662739095515 0.829979141614099 0.24506745 0.40677395 prediction 0.659958283228197 Functional Gain - ADGRG5 ENSG00000159618 CDS Human protein_coding chr16:57608957 chr16:57608958 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_26964 0 0 0 0 1 Ribosome 0.438687425439602 0.438824971380551 0 0 hPsi_site_20688 iPseU_CNN:0;iRNA_PseU:0 20689 chr10 73111447 73111447 1 + G A PCPG 73111446 + 73111426 73111466 41 TTTTTGCGGTCACCATTGTCTGCATGGTGATCCTCAGCGGT TTTTTGCGGTCACCATTGTCTACATGGTGATCCTCAGCGGT < 41bp 0.414658143696101 0.829976719979954 0.33884236 0.66779816 prediction 0.659953439959907 Functional Gain - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73111446 chr10:73111447 nonsynonymous SNV 0.712 4 22 hPsi_associated_SNPs_26965 0 0 0 0 1 chromatin 0.43871786259309 0.438753262085535 0.33559632 0 hPsi_site_20689 iPseU_CNN:0.33559632;iRNA_PseU:0 20690 chr12 113444350 113444350 1 + C A BLCA 113444349 + 113444329 113444369 41 TGCAGCGAAACTTCATTCGCTCCCGGCCCACCAAACTAAAG TGCAGCGAAACTTCATTCGCTACCGGCCCACCAAACTAAAG < 41bp 0.542216768385419 0.87217775283034 0.13441315 0.46091166 prediction 0.659921968889842 Functional Gain - OAS2 ENSG00000111335 CDS Human protein_coding chr12:113444349 chr12:113444350 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_26966 0 0 0 0 1 exosome 0.438690236935555 0.438716484278915 0 0 hPsi_site_20690 iPseU_CNN:0;iRNA_PseU:0 20691 chr19 41884342 41884342 1 + C A GBM 41884341 + 41884321 41884361 41 GAGAGATAGCCTTTGCCGAGTCCCTGAGGGGTTTGCAGTTC GAGAGATAGCCTTTGCCGAGTACCTGAGGGGTTTGCAGTTC < 41bp 0.541002330836771 0.870960665569088 0.2201964 0.54872024 prediction 0.659916669464634 Functional Gain - TMEM91 ENSG00000142046;ENSG00000248098;ENSG00000255730 CDS Human other chr19:41884341 chr19:41884342 nonsynonymous SNV 0.435 3 22 hPsi_associated_SNPs_26967 0 0 1 0 1 chromatin 0.438718591379184 0.438718522322756 0.0974404799999999 0 hPsi_site_20691 iPseU_CNN:0.0974404799999999;iRNA_PseU:0 20692 chr11 71169547 71169547 1 + G A rs2276360 71169546 + 71169526 71169566 41 TTTCAAGTCCTAGCGGCCCTTGTGGAGTCTCCCGTCACTCA TTTCAAGTCCTAGCGGCCCTTATGGAGTCTCCCGTCACTCA < 41bp 0.414065292088626 0.829953990339866 0.34773302 0.4147707 prediction 0.659907980679732 Functional Gain - NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71169546 chr11:71169547 nonsynonymous SNV 0.422 2 22 hPsi_associated_SNPs_26968 0 0 1 0 2 Ribosome 0.438732016828372 0.438718600703946 0 0 hPsi_site_20692 iPseU_CNN:0;iRNA_PseU:0 20693 chr22 31484046 31484046 1 + G A CESC 31484045 + 31484025 31484065 41 GGAGCGCGAGGAGGAGGCCCTGGCATCCAAGCGTTTCCGTG GGAGCGCGAGGAGGAGGCCCTAGCATCCAAGCGTTTCCGTG < 41bp 0.431578587609067 0.829944985415507 0.2104491 0.32471436 prediction 0.659889970831014 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31484045 chr22:31484046 synonymous SNV . 0 22 hPsi_associated_SNPs_26969 0 0 1 0 2 Cytosol 0.438751126275807 0.438719172254068 0 0 hPsi_site_20693 iPseU_CNN:0;iRNA_PseU:0 20694 chr1 203097984 203097984 1 + C A COAD 203097983 + 203097963 203098003 41 GCCCGCCATGCCGCCCTCCATCTCAGCTTTCCAGGCCGCCT GCCCGCCATGCCGCCCTCCATATCAGCTTTCCAGGCCGCCT < 41bp 0.532997034192097 0.862938131565226 0.42690673 0.3946278 prediction 0.659882194746259 Functional Gain - ADORA1 ENSG00000163485 CDS Human protein_coding chr1:203097983 chr1:203097984 synonymous SNV . 0 22 hPsi_associated_SNPs_26970 0 0 0 0 1 exosome 0.438658068802727 0.438717432254644 0 0 hPsi_site_20694 iPseU_CNN:0;iRNA_PseU:0 20695 chr3 46940267 46940267 1 + G A LUSC 46940266 + 46940246 46940286 41 TACTCTGGCGCCACGCTTGATGAGGCTGAGCGCCTCACCGA TACTCTGGCGCCACGCTTGATAAGGCTGAGCGCCTCACCGA < 41bp 0.414746336080848 0.829937469124671 0.46081138 0.89910245 prediction 0.659874938249342 Functional Gain - PTH1R ENSG00000160801 CDS Human protein_coding chr3:46940266 chr3:46940267 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_26971 0 0 0 0 1 exosome 0.438718592995102 0.438718592994964 0.7982049 0 hPsi_site_20695 iPseU_CNN:0.7982049;iRNA_PseU:0 20696 chr21 45711088 45711088 1 + C A LUAD 45711087 + 45711067 45711107 41 GTCCCCTCCGCTCCGGGAGATCCCCAGGTGAGCCTGCACCT GTCCCCTCCGCTCCGGGAGATACCCAGGTGAGCCTGCACCT < 41bp 0.483681876222275 0.829936857591105 0.22768044 0.47634166 prediction 0.65987371518221 Functional Gain - AIRE ENSG00000160224 CDS Human protein_coding chr21:45711087 chr21:45711088 synonymous SNV . 0 22 hPsi_associated_SNPs_26972 0 0 0 0 1 exosome 0.438718593761566 0.438711947398947 0 0 hPsi_site_20696 iPseU_CNN:0;iRNA_PseU:0 20697 chr9 139250978 139250978 1 + C A UCEC 139250977 + 139250957 139250997 41 CCAGGAGCCGGGGGACGACTTCTTCAACATGCTCATCAAGT CCAGGAGCCGGGGGACGACTTATTCAACATGCTCATCAAGT < 41bp 0.481325085025536 0.829936710488152 0.379498 0.71986413 prediction 0.659873420976304 Functional Gain - GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139250977 chr9:139250978 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_26973 0 0 0 0 1 Cytosol 0.438718592994918 0.438718566570511 0.43972826 0 hPsi_site_20697 iPseU_CNN:0.43972826;iRNA_PseU:0 20698 chr19 36277868 36277868 1 + G A rs200826516 36277867 + 36277847 36277887 41 TCTCAGCCCCGGCCGGAGCCTGCGCCCCCATCTCATACCCC TCTCAGCCCCGGCCGGAGCCTACGCCCCCATCTCATACCCC < 41bp 0.421359118827703 0.829930042699521 0.23373654 0.68161935 prediction 0.659860085399041 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277867 chr19:36277868 synonymous SNV . 0 22 hPsi_associated_SNPs_26974 0 0 1 0 1 chromatin 0.4387185929951 0.438718592995101 0.3632387 0 hPsi_site_20698 iPseU_CNN:0.3632387;iRNA_PseU:0 20699 chr5 72469279 72469279 1 + G A LUSC 72469278 + 72469258 72469298 41 AAGGTGTCTCCCACTTTGAATGGACCCAGCTCCTTGGGCCC AAGGTGTCTCCCACTTTGAATAGACCCAGCTCCTTGGGCCC < 41bp 0.569228413222176 0.899158300168465 0.36371604 0.8052028 prediction 0.659859773892577 Functional Gain - TMEM174 ENSG00000164325 CDS Human protein_coding chr5:72469278 chr5:72469279 stopgain 1.000 1 22 hPsi_associated_SNPs_26975 0 0 0 0 0 unknown 0.438718592995102 0.438718589204114 0.6104056 0 hPsi_site_20699 iPseU_CNN:0.6104056;iRNA_PseU:0 20700 chr7 77326204 77326204 1 + C T BLCA 77326205 - 77326185 77326225 41 CGGCGGGCAGGAGGAGATGGTGAGGCTGAGCGTGCAGCAGC CGGCGGGCAGGAGGAGATGGTAAGGCTGAGCGTGCAGCAGC < 41bp 0.563681858690719 0.893609002646 0.28003818 0.6281835 prediction 0.659854287910561 Functional Gain - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77326205 chr7:77326204 nonsynonymous SNV 0.758 1 22 hPsi_associated_SNPs_26976 0 0 0 0 0 Cytosol 0.438317669568135 0.43871839444772 0.256367 0 hPsi_site_20700 iPseU_CNN:0.256367;iRNA_PseU:0 20701 chr11 4566768 4566768 1 + C A BLCA 4566767 + 4566747 4566787 41 TGCCACTGTTGAGTCAGGCATCTTCCTTGCCATGGCTTTTG TGCCACTGTTGAGTCAGGCATATTCCTTGCCATGGCTTTTG < 41bp 0.510081016786827 0.840006873865407 0.350182 0.757946 prediction 0.65985171415716 Functional Gain - OR52M1 ENSG00000197790 CDS Human protein_coding chr11:4566767 chr11:4566768 synonymous SNV . 0 22 hPsi_associated_SNPs_26977 0 0 0 0 0 unknown 0.438705738061938 0.438683504815896 0.515892 0 hPsi_site_20701 iPseU_CNN:0.515892;iRNA_PseU:0 20702 chr21 43829711 43829711 1 + C A UCEC 43829710 + 43829690 43829730 41 ACACGTGACACTCTGTGACTTCTTCACGGTGAGTCAACCCA ACACGTGACACTCTGTGACTTATTCACGGTGAGTCAACCCA < 41bp 0.526315794026516 0.85624112480922 0.3365559 0.3883544 prediction 0.659850661565409 Functional Gain - UBASH3A ENSG00000160185 CDS Human protein_coding chr21:43829710 chr21:43829711 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_26978 0 0 0 4 1 exosome 0.438727973804326 0.438834481180861 0 0 hPsi_site_20702 iPseU_CNN:0;iRNA_PseU:0 20703 chr11 18387353 18387353 1 + G A BRCA 18387352 + 18387332 18387372 41 GGTAAGTCACATAGAAGAGATGCTCCAGACAGCCTACAACA GGTAAGTCACATAGAAGAGATACTCCAGACAGCCTACAACA < 41bp 0.557194792492995 0.887120100457178 0.3004002 0.7314715 prediction 0.659850615928366 Functional Gain - GTF2H1 ENSG00000110768 CDS Human protein_coding chr11:18387352 chr11:18387353 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_26979 0 0 0 0 1 Cytosol 0.438709361598169 0.438717443737256 0.462943 0 hPsi_site_20703 iPseU_CNN:0.462943;iRNA_PseU:0 20704 chr1 231401124 231401124 1 + C A UCEC 231401123 + 231401103 231401143 41 TACCTTTGGTGGCAATAAACTCTACTGGGCTGTATTCTCTG TACCTTTGGTGGCAATAAACTATACTGGGCTGTATTCTCTG < 41bp 0.473825977392263 0.82992069642558 0.24837911 0.34296 prediction 0.65984139285116 Functional Gain - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401123 chr1:231401124 synonymous SNV . 0 22 hPsi_associated_SNPs_26980 0 0 1 0 2 Cytosol 0.437881610085594 0.438652199225091 0 0 hPsi_site_20704 iPseU_CNN:0;iRNA_PseU:0 20705 chr10 118394447 118394447 1 + G A CESC 118394446 + 118394426 118394466 41 GGCTTCCTGGGCTATCCCTGTGCCTCCTACGATGAGTTTCA GGCTTCCTGGGCTATCCCTGTACCTCCTACGATGAGTTTCA < 41bp 0.452382194196796 0.829912649265878 0.2873775 0.8424021 prediction 0.659825298531755 Functional Gain - PNLIPRP2 ENSG00000165862 CDS Human other chr10:118394446 chr10:118394447 nonsynonymous SNV 0.747 1 22 hPsi_associated_SNPs_26981 0 0 0 0 1 unknown 0.438718592995046 0.438718592995098 0.6848042 0 hPsi_site_20705 iPseU_CNN:0.6848042;iRNA_PseU:0 20706 chr17 3563584 3563584 1 + C A UCEC 3563583 + 3563563 3563603 41 AGTTTGGACTCGGGGTCTTCTCCATCGTCTTCGACGTCGTC AGTTTGGACTCGGGGTCTTCTACATCGTCTTCGACGTCGTC < 41bp 0.509585406877932 0.839497799766358 0.26970658 0.38386184 prediction 0.659824785776851 Functional Gain - CTNS ENSG00000040531 CDS Human protein_coding chr17:3563583 chr17:3563584 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_26982 0 0 1 0 2 Endoplasmic reticulum 0.438717899985103 0.438713419936327 0 0 hPsi_site_20706 iPseU_CNN:0;iRNA_PseU:0 20707 chrX 51486993 51486993 1 + G A CESC 51486992 + 51486972 51487012 41 GCCGGCTCCGGCAGCAACGATGAAACCTGCACCGGCGCGGG GCCGGCTCCGGCAGCAACGATAAAACCTGCACCGGCGCGGG < 41bp 0.562528591930287 0.892440351289508 0.25827175 0.38708556 prediction 0.659823518718442 Functional Gain - GSPT2 ENSG00000189369 CDS Human protein_coding chrX:51486992 chrX:51486993 nonsynonymous SNV 0.672 0 22 hPsi_associated_SNPs_26983 0 0 0 0 0 Cytosol 0.438731857316163 0.438718578818833 0 0 hPsi_site_20707 iPseU_CNN:0;iRNA_PseU:0 20708 chr11 64054074 64054074 1 + G A BLCA 64054073 + 64054053 64054093 41 ACCTGCTGTGACCCTGGGGCTGACAGCTGCCTACACCACCC ACCTGCTGTGACCCTGGGGCTAACAGCTGCCTACACCACCC < 41bp 0.569869285857476 0.899778958645042 0.18295416 0.24182397 prediction 0.659819345575132 Functional Gain - GPR137 ENSG00000173264 CDS Human protein_coding chr11:64054073 chr11:64054074 synonymous SNV . 0 22 hPsi_associated_SNPs_26984 0 0 1 0 1 Cytosol 0.438691296711642 0.438718448642641 0 0 hPsi_site_20708 iPseU_CNN:0;iRNA_PseU:0 20709 chr17 76498731 76498731 1 + G A STAD 76498730 + 76498710 76498750 41 CCTTCCTCCAGCCTGGCAAATGCCAGGCCCACCTCGGTCGT CCTTCCTCCAGCCTGGCAAATACCAGGCCCACCTCGGTCGT < 41bp 0.552123322230805 0.882025972385169 0.3125179 0.6887322 prediction 0.659805300308729 Functional Gain - DNAH17 ENSG00000187775 CDS Human protein_coding chr17:76498730 chr17:76498731 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_26985 0 0 0 0 0 chromatin 0.438718592989375 0.438718592993696 0.3774644 0 hPsi_site_20709 iPseU_CNN:0.3774644;iRNA_PseU:0 20710 chr2 11318457 11318457 1 + G A rs3206843 11318456 + 11318436 11318476 41 ACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACC ACAACAGGGTGGCCTTGTTGTATATAATACGGTATTATACC < 41bp 0.540167273806176 0.870059676861901 0.33079755 0.5355856 prediction 0.659784806111451 Functional Gain - PQLC3 ENSG00000162976 UTR3 Human protein_coding chr2:11318456 chr2:11318457 . . 0 22 hPsi_associated_SNPs_26986 0 0 0 0 0 Ribosome 0.438718299907027 0.438718587195466 0.0711712 0 hPsi_site_20710 iPseU_CNN:0.0711712;iRNA_PseU:0 20711 chr7 94178862 94178862 1 + C A UCEC 94178861 + 94178841 94178881 41 TCAGGGTGCATTTGAGAAGATCTTTTCTCTTTGGCCATTGT TCAGGGTGCATTTGAGAAGATATTTTCTCTTTGGCCATTGT < 41bp 0.48119294073609 0.829892007682991 0.61966544 0.3993442 prediction 0.659784015365982 Functional Gain - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94178861 chr7:94178862 synonymous SNV . 0 22 hPsi_associated_SNPs_26987 0 0 1 0 2 Cytosol 0.435695342162912 0.438716970524363 0 0 hPsi_site_20711 iPseU_CNN:0;iRNA_PseU:0 20712 chr20 2582819 2582819 1 + C A UCEC 2582818 + 2582798 2582838 41 AATATCCATCTGACAAGATTTCTTCGTGTCCTGGCCAACTT AATATCCATCTGACAAGATTTATTCGTGTCCTGGCCAACTT < 41bp 0.46119715554527 0.829885206709408 0.38420132 0.59645355 prediction 0.659770413418816 Functional Gain - TMC2 ENSG00000149488 CDS Human protein_coding chr20:2582818 chr20:2582819 nonsynonymous SNV 0.940 5 22 hPsi_associated_SNPs_26988 0 0 0 0 1 exosome 0.438690366648806 0.439036041485611 0.1929071 0 hPsi_site_20712 iPseU_CNN:0.1929071;iRNA_PseU:0 20713 chr1 12024734 12024734 1 + C A UCEC 12024733 + 12024713 12024753 41 TGTGCCCTATATTTCAAACATCTACTTGATCAAGGGCAGTG TGTGCCCTATATTTCAAACATATACTTGATCAAGGGCAGTG < 41bp 0.472570350238338 0.829879710411571 0.26000404 0.40556443 prediction 0.659759420823141 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12024733 chr1:12024734 synonymous SNV . 0 22 hPsi_associated_SNPs_26989 0 0 1 0 1 Nucleus 0.438713193137308 0.438402755707056 0 0 hPsi_site_20713 iPseU_CNN:0;iRNA_PseU:0 20714 chr12 93100661 93100661 1 + C A COAD 93100660 + 93100640 93100680 41 TGGGCTTCCCATGTTACCTTTCGAAGAGCCTGCCAGGAAGC TGGGCTTCCCATGTTACCTTTAGAAGAGCCTGCCAGGAAGC < 41bp 0.530606400465831 0.860484681281467 0.31825173 0.33757922 prediction 0.659756561631271 Functional Gain - C12orf74 ENSG00000214215 CDS Human protein_coding chr12:93100660 chr12:93100661 stopgain 0.001 0 22 hPsi_associated_SNPs_26990 0 0 0 0 0 exosome 0.438718595067222 0.438718592995389 0 0 hPsi_site_20714 iPseU_CNN:0;iRNA_PseU:0 20715 chr22 31011762 31011762 1 + C A PAAD 31011761 + 31011741 31011781 41 GATCTGATCTTCCCAGACTGTCTGGCACCACGAGGTAGCCC GATCTGATCTTCCCAGACTGTATGGCACCACGAGGTAGCCC < 41bp 0.451750772038417 0.82987549491634 0.19374073 0.38018355 prediction 0.65975098983268 Functional Gain - TCN2 ENSG00000185339 CDS Human protein_coding chr22:31011761 chr22:31011762 nonsynonymous SNV 0.756 0 22 hPsi_associated_SNPs_26991 0 0 0 0 1 Endoplasmic reticulum 0.438705701716895 0.438677398025095 0 0 hPsi_site_20715 iPseU_CNN:0;iRNA_PseU:0 20716 chrX 153694099 153694099 1 + G A HNSC 153694098 + 153694078 153694118 41 GGTGCATCTCAGAGCACAGGTGCCAGCTGCGGACCCACTGC GGTGCATCTCAGAGCACAGGTACCAGCTGCGGACCCACTGC < 41bp 0.416621006924956 0.829872183610353 0.21480659 0.3546226 prediction 0.659744367220705 Functional Gain - PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153694098 chrX:153694099 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_26992 0 0 0 0 2 Endoplasmic reticulum 0.438166231325596 0.438751365614477 0 0 hPsi_site_20716 iPseU_CNN:0;iRNA_PseU:0 20717 chrX 74544228 74544228 1 + G A rs7054237 74544227 + 74544207 74544247 41 CCCACCACAGCCAGTAGTGCTGCAGTAGATTTTTGCTGCAC CCCACCACAGCCAGTAGTGCTACAGTAGATTTTTGCTGCAC < 41bp 0.557775512020582 0.887647574700639 0.4039127 0.6146454 prediction 0.659744125360116 Functional Gain - UPRT;ZDHHC15 ENSG00000094841;ENSG00000232186 intergenic Human other chrX:74544227 chrX:74544228 . . 0 22 hPsi_associated_SNPs_26993 0 0 0 0 0 unknown 0.438718592965124 0.43871859298435 0.2292908 0 hPsi_site_20717 iPseU_CNN:0.2292908;iRNA_PseU:0 20718 chr1 210334281 210334281 1 + C A READ 210334280 + 210334260 210334300 41 AAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTCT AAGAGATGATAGGCTGGATTTATTTAGGTCTCAACAGCTCT < 41bp 0.494172466325772 0.829863763476653 0.2892772 0.6504772 prediction 0.659727526953307 Functional Gain - SYT14 ENSG00000143469 CDS Human protein_coding chr1:210334280 chr1:210334281 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_26994 0 0 1 0 0 unknown 0.438190482930756 0.438675454803033 0.3009544 0 hPsi_site_20718 iPseU_CNN:0.3009544;iRNA_PseU:0 20719 chr1 172558009 172558009 1 + C A LUSC 172558008 + 172557988 172558028 41 GAGGAGGAAGAGGAGGCAAGTCCATCTACAGTGACCCTTCT GAGGAGGAAGAGGAGGCAAGTACATCTACAGTGACCCTTCT < 41bp 0.474997522168721 0.829856694334804 0.26486197 0.6835008 prediction 0.659713388669607 Functional Gain - SUCO ENSG00000094975 CDS Human protein_coding chr1:172558008 chr1:172558009 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_26995 0 0 1 0 1 Ribosome 0.438718592995102 0.438718594509337 0.3670016 0 hPsi_site_20719 iPseU_CNN:0.3670016;iRNA_PseU:0 20720 chr8 41394782 41394782 1 + C A HNSC 41394781 + 41394761 41394801 41 GGAGAGGATCCGCTACGTCCTCAGCAGCTACTTGCGGTGTC GGAGAGGATCCGCTACGTCCTAAGCAGCTACTTGCGGTGTC < 41bp 0.545045374638761 0.874900899294793 0.27117985 0.37330997 prediction 0.659711049312064 Functional Gain - GINS4 ENSG00000147536 CDS Human protein_coding chr8:41394781 chr8:41394782 synonymous SNV . 0 22 hPsi_associated_SNPs_26996 0 0 1 0 2 chromatin 0.438716929988566 0.438718444680626 0 0 hPsi_site_20720 iPseU_CNN:0;iRNA_PseU:0 20721 chr7 99818586 99818586 1 + C A LUAD 99818585 + 99818565 99818605 41 CTCCCAGGCTGCTCTTCACGTCCCTTATGCCACTATCAACA CTCCCAGGCTGCTCTTCACGTACCTTATGCCACTATCAACA < 41bp 0.477965986391912 0.829849662366945 0.36929095 0.6688015 prediction 0.659699324733891 Functional Gain - PVRIG ENSG00000213413 CDS Human protein_coding chr7:99818585 chr7:99818586 synonymous SNV . 0 22 hPsi_associated_SNPs_26997 0 0 0 0 1 exosome 0.438718587663733 0.438722289572443 0.337603 0 hPsi_site_20721 iPseU_CNN:0.337603;iRNA_PseU:0 20722 chr1 110086734 110086734 1 + C A LUAD 110086733 + 110086713 110086753 41 GTCTGCTTCTTCAAGCCAGCTCCAGAGGAGGAGCTGAGGCT GTCTGCTTCTTCAAGCCAGCTACAGAGGAGGAGCTGAGGCT < 41bp 0.519580194662756 0.849427913900752 0.19712791 0.34987277 prediction 0.659695438475991 Functional Gain - GPR61 ENSG00000156097 CDS Human protein_coding chr1:110086733 chr1:110086734 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_26998 0 0 0 0 0 exosome 0.438718607967591 0.438721709914335 0 0 hPsi_site_20722 iPseU_CNN:0;iRNA_PseU:0 20723 chr14 94391643 94391643 1 + C A HNSC 94391642 + 94391622 94391662 41 CCTTAGAAGAGAGAAGATCTTCTGGAGAGAGGAATGATGCA CCTTAGAAGAGAGAAGATCTTATGGAGAGAGGAATGATGCA < 41bp 0.493564567768066 0.829843118087034 0.5688828 0.60624844 prediction 0.659686236174068 Functional Gain - FAM181A ENSG00000140067 CDS Human protein_coding chr14:94391642 chr14:94391643 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_26999 0 0 0 0 1 exosome 0.43871989060699 0.438718599444576 0.07473128 0 hPsi_site_20723 iPseU_CNN:0.07473128;iRNA_PseU:0 20724 chr11 193129 193129 1 + G A SKCM 193128 + 193108 193148 41 GAGCCGTGCCCTCCTGCTGGTGGCCCTCACCCTGTTCTGCA GAGCCGTGCCCTCCTGCTGGTAGCCCTCACCCTGTTCTGCA < 41bp 0.572485864122012 0.902325645961205 0.1748656 0.6041393 prediction 0.659679563678386 Functional Gain - SCGB1C1;SCGB1C2 ENSG00000188076 CDS Human protein_coding chr11:193128 chr11:193129 synonymous SNV . 0 22 hPsi_associated_SNPs_27000 0 0 0 0 1 unknown 0.438718584431351 0.438718593172616 0.2082786 0 hPsi_site_20724 iPseU_CNN:0.2082786;iRNA_PseU:0 20725 chr11 47311499 47311499 1 + G A UCEC 47311498 + 47311478 47311518 41 CTGGCTCAACATGAAAAAGGTGCGCCGGCTGCTGGAGAGCG CTGGCTCAACATGAAAAAGGTACGCCGGCTGCTGGAGAGCG < 41bp 0.419809437483316 0.829837582717163 0.34869766 0.8323958 prediction 0.659675165434326 Functional Gain - MADD ENSG00000110514 CDS Human protein_coding chr11:47311498 chr11:47311499 synonymous SNV . 0 22 hPsi_associated_SNPs_27001 0 0 1 0 1 Nucleus 0.438718592969067 0.438718635097725 0.6647916 0 hPsi_site_20725 iPseU_CNN:0.6647916;iRNA_PseU:0 20726 chr11 113857651 113857651 1 + G T LUAD 113857650 + 113857630 113857670 41 GACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCACCTGGT GACCTGCAGCAGCCCGTGCCTTCTTGGCTGCGTCACCTGGT < 41bp 0.502644018806968 0.832475545433137 0.34600836 0.8302702 prediction 0.659663053252339 Functional Gain - HTR3A ENSG00000166736 CDS Human protein_coding chr11:113857650 chr11:113857651 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_27002 0 0 0 0 0 Cytosol 0.438718608070068 0.438717908041335 0.6605404 0 hPsi_site_20726 iPseU_CNN:0.6605404;iRNA_PseU:0 20727 chr2 206587347 206587347 1 + C A UCEC 206587346 + 206587326 206587366 41 GATCATCCTGCAGTTCCTGATCTTTGACCTGGAGCATGACC GATCATCCTGCAGTTCCTGATATTTGACCTGGAGCATGACC < 41bp 0.465492239518866 0.829827342211233 0.6597244 0.78726184 prediction 0.659654684422465 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206587346 chr2:206587347 synonymous SNV . 0 22 hPsi_associated_SNPs_27003 0 0 0 0 1 Nucleus 0.438718456837509 0.438664006451504 0.25507488 0 hPsi_site_20727 iPseU_CNN:0.25507488;iRNA_PseU:0 20728 chr11 55579501 55579501 1 + C A LUAD 55579500 + 55579480 55579520 41 GATCTACCTCCTGTCTTAAGTCTTGCTTGCTCTGATATCAC GATCTACCTCCTGTCTTAAGTATTGCTTGCTCTGATATCAC < 41bp 0.502562902823683 0.832387501742406 0.21750733 0.3873405 prediction 0.659649197837447 Functional Gain - OR5L1 ENSG00000186117 CDS Human other chr11:55579500 chr11:55579501 nonsynonymous SNV 0.706 3 22 hPsi_associated_SNPs_27004 0 0 0 0 0 unknown 0.438715493802951 0.439208570471869 0 0 hPsi_site_20728 iPseU_CNN:0;iRNA_PseU:0 20729 chr3 130116491 130116491 1 + C A UCEC 130116490 + 130116470 130116510 41 TGTGCAGGGGCAGCCTTTGTTCCAGGGCCACCCCCAGCTGG TGTGCAGGGGCAGCCTTTGTTACAGGGCCACCCCCAGCTGG < 41bp 0.530687933470378 0.860509574647174 0.6176824 0.80930185 prediction 0.659643282353594 Functional Gain - COL6A5 ENSG00000172752 CDS Human protein_coding chr3:130116490 chr3:130116491 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27005 0 0 0 0 1 chromatin 0.438718593006805 0.438718596853233 0.3832389 0 hPsi_site_20729 iPseU_CNN:0.3832389;iRNA_PseU:0 20730 chr1 10479524 10479524 1 + G A GBM 10479523 + 10479503 10479543 41 GGTCCAGGCTGGCATTCCCATGCCCTGTTTTACCACTGCCC GGTCCAGGCTGGCATTCCCATACCCTGTTTTACCACTGCCC < 41bp 0.574536552066356 0.90435600383883 0.52474433 0.73802733 prediction 0.659638903544947 Functional Gain - PGD ENSG00000142657 CDS Human protein_coding chr1:10479523 chr1:10479524 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27006 0 0 1 0 2 Cytosol 0.438718627598848 0.438719637986643 0.426566 0 hPsi_site_20730 iPseU_CNN:0.426566;iRNA_PseU:0 20731 chr17 27064464 27064464 1 + G A SKCM 27064463 + 27064443 27064483 41 GCCACCACTCAGCCACATCATGGCACAGCCCCTCTGCATCC GCCACCACTCAGCCACATCATAGCACAGCCCCTCTGCATCC < 41bp 0.409935810103361 0.829817254718332 0.21922997 0.2948518 prediction 0.659634509436663 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064463 chr17:27064464 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27007 0 0 0 0 0 Nucleus 0.438718233130545 0.438718133242403 0 0 hPsi_site_20731 iPseU_CNN:0;iRNA_PseU:0 20732 chr2 163204191 163204191 1 + C A BLCA 163204190 + 163204170 163204210 41 GATACTCTGGGCCAGCATATTCAGACACTTATTCCTCAGCT GATACTCTGGGCCAGCATATTAAGACACTTATTCCTCAGCT < 41bp 0.519631717157326 0.849445368336799 0.1992122 0.34618855 prediction 0.659627302358947 Functional Gain - GCA ENSG00000115271 CDS Human protein_coding chr2:163204190 chr2:163204191 stopgain 0.001 0 22 hPsi_associated_SNPs_27008 0 0 0 0 1 Ribosome 0.438924359356421 0.438718650390231 0 0 hPsi_site_20732 iPseU_CNN:0;iRNA_PseU:0 20733 chr1 228346668 228346668 1 + C A BLCA 228346667 + 228346647 228346687 41 TGCTACCTCTGCGGGCACTGTCGGGGAGCAGGGCCGGCCCG TGCTACCTCTGCGGGCACTGTAGGGGAGCAGGGCCGGCCCG < 41bp 0.517958790771943 0.84776855589427 0.33929718 0.9482962 prediction 0.659619530244654 Functional Gain - GJC2 ENSG00000198835 CDS Human protein_coding chr1:228346667 chr1:228346668 synonymous SNV . 0 22 hPsi_associated_SNPs_27009 0 0 0 0 0 chromatin 0.438718553533228 0.438718593682544 0.8965924 0 hPsi_site_20733 iPseU_CNN:0.8965924;iRNA_PseU:0 20734 chr6 7581100 7581100 1 + C A CESC 7581099 + 7581079 7581119 41 GGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGC GGACCAGGATATCACGCGGTTACAGAACTCTCTGAAAGAGC < 41bp 0.508541162373696 0.838350379620483 0.6429512 0.7620375 prediction 0.659618434493576 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7581099 chr6:7581100 nonsynonymous SNV 0.799 0 22 hPsi_associated_SNPs_27010 0 0 1 0 0 Nucleus 0.438923663701277 0.439562815088803 0.2381726 0 hPsi_site_20734 iPseU_CNN:0.2381726;iRNA_PseU:0 20735 chr10 1053023 1053023 1 + G T LUSC 1053022 + 1053002 1053042 41 GGGAAATAAAGTGAATGAGGTGCTGAATAGACTGCACCTGG GGGAAATAAAGTGAATGAGGTTCTGAATAGACTGCACCTGG < 41bp 0.50256364386844 0.832364627263723 0.285205 0.35270864 prediction 0.659601966790566 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1053022 chr10:1053023 synonymous SNV . 0 22 hPsi_associated_SNPs_27011 0 0 1 1 2 Cytosol 0.438718592993956 0.438718582200259 0 0 hPsi_site_20735 iPseU_CNN:0;iRNA_PseU:0 20736 chr16 70211266 70211266 1 + G A KIRC 70211265 + 70211245 70211285 41 GGGCTGGAACATGCAGCTGCTGCCCGCGGGCTTGGCGTCCT GGGCTGGAACATGCAGCTGCTACCCGCGGGCTTGGCGTCCT < 41bp 0.416572293252593 0.829797825918041 0.31217712 0.66012347 prediction 0.659595651836082 Functional Gain - CLEC18C ENSG00000157335 CDS Human protein_coding chr16:70211265 chr16:70211266 synonymous SNV 0.219 0 22 hPsi_associated_SNPs_27012 0 0 0 0 0 exosome 0.439097725689752 0.438708657735067 0.32024694 0 hPsi_site_20736 iPseU_CNN:0.32024694;iRNA_PseU:0 20737 chr1 203465235 203465235 1 + G A KIRC 203465234 + 203465214 203465254 41 GAAGAGGAGAGAGGAGCAGATGCCCAGGGAAGGCGATTCCT GAAGAGGAGAGAGGAGCAGATACCCAGGGAAGGCGATTCCT < 41bp 0.42546132353549 0.82979538003004 0.18451598 0.45452556 prediction 0.65959076006008 Functional Gain - OPTC ENSG00000188770 CDS Human protein_coding chr1:203465234 chr1:203465235 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27013 0 0 0 0 0 unknown 0.438718592967889 0.438718592579553 0 0 hPsi_site_20737 iPseU_CNN:0;iRNA_PseU:0 20738 chr17 39871710 39871710 1 + G A STAD 39871709 + 39871689 39871729 41 ATGCAGCGACTGTGTGTGTATGTGCTGATCTTTGCACTGGC ATGCAGCGACTGTGTGTGTATATGCTGATCTTTGCACTGGC < 41bp 0.563252681802725 0.893046500892572 0.47707662 0.49259874 prediction 0.659587638179693 Functional Gain - GAST ENSG00000184502 CDS Human protein_coding chr17:39871709 chr17:39871710 nonsynonymous SNV 0.041 0 22 hPsi_associated_SNPs_27014 0 0 0 0 1 unknown 0.43919401086789 0.439517754520569 0 0 hPsi_site_20738 iPseU_CNN:0;iRNA_PseU:0 20739 chr4 128813634 128813634 1 + C A OV 128813633 + 128813613 128813653 41 AATGCATTTTGATGGAGAATTCTCCTGGTGCTGATTTTGAG AATGCATTTTGATGGAGAATTATCCTGGTGCTGATTTTGAG < 41bp 0.497442912643744 0.829791866740663 0.23893723 0.3206758 prediction 0.659583733481326 Functional Gain - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128813633 chr4:128813634 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27015 0 0 1 0 1 Cytosol 0.44564103052321 0.438681271562659 0 0 hPsi_site_20739 iPseU_CNN:0;iRNA_PseU:0 20740 chr8 145698104 145698104 1 + G A STAD 145698103 + 145698083 145698123 41 ACCGCAGGTACCACGGCCGGTGCCTGAGCCCTGCGGAGTCT ACCGCAGGTACCACGGCCGGTACCTGAGCCCTGCGGAGTCT < 41bp 0.466125959976131 0.829783950805549 0.3001042 0.9496681 prediction 0.659567901611099 Functional Gain - KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145698103 chr8:145698104 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_27016 0 0 0 0 0 nucleolus 0.438718591391542 0.438718436970158 0.8993362 0 hPsi_site_20740 iPseU_CNN:0.8993362;iRNA_PseU:0 20741 chr12 5020651 5020651 1 + G A UCEC 5020650 + 5020630 5020670 41 ACCACGACGACCACGAGTGCTGCGAGCGCGTGGTGATCAAC ACCACGACGACCACGAGTGCTACGAGCGCGTGGTGATCAAC < 41bp 0.432295050999924 0.829783602748459 0.29815435 0.890947 prediction 0.659567205496918 Functional Gain - KCNA1 ENSG00000111262 CDS Human protein_coding chr12:5020650 chr12:5020651 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27017 0 0 0 0 0 unknown 0.43014117117833 0.513524955500739 0.781894 0.0270499110014775 hPsi_site_20741 iPseU_CNN:0.781894;iRNA_PseU:0.0270499110014775 20742 chr3 147128728 147128728 1 + C A UCEC 147128727 + 147128707 147128747 41 ATCTGCTTCTGGGAGGAGTGTCCGCGCGAGGGCAAGCCCTT ATCTGCTTCTGGGAGGAGTGTACGCGCGAGGGCAAGCCCTT < 41bp 0.472927274833871 0.829773885316076 0.21494955 0.52957433 prediction 0.659547770632152 Functional Gain - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147128727 chr3:147128728 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27018 0 0 0 0 0 exosome 0.438718593916723 0.438583335910988 0.05914866 0 hPsi_site_20742 iPseU_CNN:0.05914866;iRNA_PseU:0 20743 chr16 67286623 67286623 1 + C A UCEC 67286622 + 67286602 67286642 41 TGTGTTGGACTCAGGCTATTTCATGCCTAGCAGGCTGTTCT TGTGTTGGACTCAGGCTATTTAATGCCTAGCAGGCTGTTCT < 41bp 0.50776527487658 0.837528101755732 0.20236725 0.32476372 prediction 0.659525653758305 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67286622 chr16:67286623 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27019 0 0 1 0 0 Cytosol 0.43871899664518 0.438685927801622 0 0 hPsi_site_20743 iPseU_CNN:0;iRNA_PseU:0 20744 chr6 13615791 13615791 1 + G A CESC 13615790 + 13615770 13615810 41 CGATGAGGCCCCGGAGGAGCTGACTTTCGCCAGCGCCCAGG CGATGAGGCCCCGGAGGAGCTAACTTTCGCCAGCGCCCAGG < 41bp 0.446409943623705 0.829759342968272 0.26468077 0.5746414 prediction 0.659518685936544 Functional Gain - NOL7 ENSG00000225921 CDS Human protein_coding chr6:13615790 chr6:13615791 synonymous SNV . 0 22 hPsi_associated_SNPs_27020 0 0 1 0 1 Ribosome 0.438713249112965 0.438718592988388 0.1492828 0 hPsi_site_20744 iPseU_CNN:0.1492828;iRNA_PseU:0 20745 chr17 53014503 53014503 1 + C A BLCA 53014502 + 53014482 53014522 41 CCTTCTGCCCCATCTCAAGATCTCCTCGACCTAAGTCCCAG CCTTCTGCCCCATCTCAAGATATCCTCGACCTAAGTCCCAG < 41bp 0.485031807781254 0.829757928145806 0.59365815 0.73546934 prediction 0.659515856291611 Functional Gain - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014502 chr17:53014503 nonsynonymous SNV 0.630 4 22 hPsi_associated_SNPs_27021 0 0 1 2 2 Cytosol 0.438718593001072 0.438718593844297 0.28362238 0 hPsi_site_20745 iPseU_CNN:0.28362238;iRNA_PseU:0 20746 chr16 56868155 56868155 1 + C A UCEC 56868154 + 56868134 56868174 41 AAGGGAGGCCCTCCAGTACTTCTATTTCCTCAGGTAACATT AAGGGAGGCCCTCCAGTACTTATATTTCCTCAGGTAACATT < 41bp 0.530844931827039 0.860601794718051 0.24130028 0.34585288 prediction 0.659513725782024 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56868154 chr16:56868155 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_27022 0 0 1 0 1 Nucleus 0.438718592995102 0.438718592995102 0 0 hPsi_site_20746 iPseU_CNN:0;iRNA_PseU:0 20747 chr3 23996139 23996139 1 + C A UCEC 23996138 + 23996118 23996158 41 CCTCCTCTTCTGTTCCATCTTCTCCAAATAGCTCTAATTCT CCTCCTCTTCTGTTCCATCTTATCCAAATAGCTCTAATTCT < 41bp 0.515522495561634 0.845276610609716 0.25209916 0.30657813 prediction 0.659508230096163 Functional Gain - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:23996138 chr3:23996139 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_27023 0 0 1 0 0 Ribosome 0.438718592979094 0.438718532907096 0 0 hPsi_site_20747 iPseU_CNN:0;iRNA_PseU:0 20748 chr12 130648819 130648819 1 + C A LUSC 130648818 + 130648798 130648838 41 GGAGAAGCTCATGGTGCGTATCGGGCTCTTCTCTGTGCTGT GGAGAAGCTCATGGTGCGTATAGGGCTCTTCTCTGTGCTGT < 41bp 0.524517262568919 0.854267199049859 0.79411507 0.93187076 prediction 0.659499872961881 Functional Gain - FZD10 ENSG00000111432 CDS Human protein_coding chr12:130648818 chr12:130648819 synonymous SNV . 0 22 hPsi_associated_SNPs_27024 0 0 0 0 0 exosome 0.438713625856526 0.438716734562463 0.27551138 0 hPsi_site_20748 iPseU_CNN:0.27551138;iRNA_PseU:0 20749 chr12 6618894 6618894 1 + G A COAD 6618893 + 6618873 6618913 41 ATCTTCATAGCTTTTCAGGCTGCCTTTCGAGCTCAGGGGCC ATCTTCATAGCTTTTCAGGCTACCTTTCGAGCTCAGGGGCC < 41bp 0.415225906462326 0.82974796396231 0.3556639 0.7151978 prediction 0.65949592792462 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618893 chr12:6618894 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_27025 0 0 1 0 2 Nucleus 0.438718799346823 0.438724706905592 0.4303956 0 hPsi_site_20749 iPseU_CNN:0.4303956;iRNA_PseU:0 20750 chr2 277266 277266 1 + G A LIHC 277265 + 277245 277285 41 GAGACGGTGTACCAGCAGTGTGTCAGGTGCTGCAGAGCGTT GAGACGGTGTACCAGCAGTGTATCAGGTGCTGCAGAGCGTT < 41bp 0.567240444106212 0.896987164270527 0.3245674 0.62129605 prediction 0.65949344032863 Functional Gain - ACP1 ENSG00000143727 CDS Human protein_coding chr2:277265 chr2:277266 nonsynonymous SNV 0.981 0 22 hPsi_associated_SNPs_27026 0 0 1 0 1 Ribosome 0.438103195701013 0.438574923012738 0.2425921 0 hPsi_site_20750 iPseU_CNN:0.2425921;iRNA_PseU:0 20751 chr3 38047351 38047351 1 + G T rs374808100 38047350 + 38047330 38047370 41 GGCCTGGGGCCAGGAGTACCTGAAGACTCACCCAGCAGGGA GGCCTGGGGCCAGGAGTACCTTAAGACTCACCCAGCAGGGA < 41bp 0.492969423414685 0.829745889454493 0.32486963 0.46619734 prediction 0.659491778908986 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38047350 chr3:38047351 synonymous SNV . 0 22 hPsi_associated_SNPs_27027 0 0 0 0 1 chromatin 0.438718593190555 0.438718592995102 0 0 hPsi_site_20751 iPseU_CNN:0;iRNA_PseU:0 20752 chr13 49281358 49281358 1 + G A UCEC 49281357 + 49281337 49281377 41 CCTGACCGTGCTGAGTGTTGTGCGTTTCCTGGCAATGGTTC CCTGACCGTGCTGAGTGTTGTACGTTTCCTGGCAATGGTTC < 41bp 0.565902549908226 0.895642869850469 0.25655654 0.6496284 prediction 0.659480639884486 Functional Gain - CYSLTR2 ENSG00000152207 CDS Human protein_coding chr13:49281357 chr13:49281358 synonymous SNV . 0 22 hPsi_associated_SNPs_27028 0 0 0 0 0 exosome 0.438201229320212 0.441212178238006 0.2992568 0 hPsi_site_20752 iPseU_CNN:0.2992568;iRNA_PseU:0 20753 chr12 100042091 100042091 1 + G A COAD 100042090 + 100042070 100042110 41 TTCAGGTATGCACCCATGTTTGAGAGCGACTTTATCCAGAT TTCAGGTATGCACCCATGTTTAAGAGCGACTTTATCCAGAT < 41bp 0.560532271816678 0.890268780519464 0.30207896 0.37433136 prediction 0.659473017405573 Functional Gain - FAM71C ENSG00000180219 CDS Human protein_coding chr12:100042090 chr12:100042091 nonsynonymous SNV 0.818 3 22 hPsi_associated_SNPs_27029 0 0 0 0 0 exosome 0.438718650479922 0.438827150112088 0 0 hPsi_site_20753 iPseU_CNN:0;iRNA_PseU:0 20754 chr15 67477136 67477136 1 + G A STAD 67477135 + 67477115 67477155 41 CTCAGTGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAA CTCAGTGACAGCGCTATTTTTATCCAGTCTCCCAACTGTAA < 41bp 0.403089771207303 0.829730897150627 0.2933683 0.5286614 prediction 0.659461794301255 Functional Gain - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67477135 chr15:67477136 nonsynonymous SNV 0.938 2 22 hPsi_associated_SNPs_27030 0 0 1 0 2 Cytosol 0.438717753924895 0.438718575245013 0.0573227999999999 0 hPsi_site_20754 iPseU_CNN:0.0573227999999999;iRNA_PseU:0 20755 chr16 3246218 3246218 1 + G A rs7185891 3246217 + 3246197 3246237 41 GGTCGTGGGTTTGAGCCCTGTGTTGAGCACATGTTTCCTTT GGTCGTGGGTTTGAGCCCTGTATTGAGCACATGTTTCCTTT < 41bp 0.49698810882091 0.829730801222511 0.2709192 0.7315429 prediction 0.659461602445021 Functional Gain - CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3246217 chr16:3246218 . . 0 22 hPsi_associated_SNPs_27031 0 0 1 0 0 unknown 0.438725500255979 0.438718641198715 0.4630858 0 hPsi_site_20755 iPseU_CNN:0.4630858;iRNA_PseU:0 20756 chr9 131198051 131198051 1 + C A BLCA 131198050 + 131198030 131198070 41 GGCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGAC GGCTCAGTGACACGGAGACATACTCTCCATGGGATGATGAC < 41bp 0.475416349025873 0.829728993760752 0.2623532 0.6765605 prediction 0.659457987521505 Functional Gain - CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198050 chr9:131198051 nonsynonymous SNV 0.986 5 22 hPsi_associated_SNPs_27032 0 0 1 0 0 chromatin 0.440232631837696 0.442007166153637 0.353121 0 hPsi_site_20756 iPseU_CNN:0.353121;iRNA_PseU:0 20757 chr1 21887175 21887175 1 + G A UCEC 21887174 + 21887154 21887194 41 GCGCAAGAGACACTGAAATATGCCCTGGAGCTTCAGAAGCT GCGCAAGAGACACTGAAATATACCCTGGAGCTTCAGAAGCT < 41bp 0.417817924887063 0.829728291276038 0.28518504 0.34093025 prediction 0.659456582552076 Functional Gain - ALPL ENSG00000162551 CDS Human protein_coding chr1:21887174 chr1:21887175 nonsynonymous SNV 0.049 3 22 hPsi_associated_SNPs_27033 0 0 0 0 2 Endoplasmic reticulum 0.438716976126762 0.438716210162973 0 0 hPsi_site_20757 iPseU_CNN:0;iRNA_PseU:0 20758 chr17 7127680 7127680 1 + G A ESCA 7127679 + 7127659 7127699 41 GGCCTGAGTCTCAGCGGACTTGTCCACCCGGAGTTGAGTCG GGCCTGAGTCTCAGCGGACTTATCCACCCGGAGTTGAGTCG < 41bp 0.576097087628475 0.905823110294769 0.26551294 0.34940112 prediction 0.659452045332588 Functional Gain - ACADVL ENSG00000072778 CDS Human protein_coding chr17:7127679 chr17:7127680 nonsynonymous SNV 0.015 1 22 hPsi_associated_SNPs_27034 0 0 1 0 2 Endoplasmic reticulum 0.438720383706605 0.438719198068762 0 0 hPsi_site_20758 iPseU_CNN:0;iRNA_PseU:0 20759 chr12 51442916 51442916 1 + C A UCEC 51442915 + 51442895 51442935 41 TAATGGGAAATACCATCGTTTCTTGGGTCGTCATTTCCCCC TAATGGGAAATACCATCGTTTATTGGGTCGTCATTTCCCCC < 41bp 0.539758696443904 0.869484610948545 0.3613516 0.6260853 prediction 0.659451829009281 Functional Gain - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51442915 chr12:51442916 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27035 0 0 1 2 2 chromatin 0.438718592995102 0.438718592995102 0.2521706 0 hPsi_site_20759 iPseU_CNN:0.2521706;iRNA_PseU:0 20760 chr5 6750547 6750547 1 + G T LUSC 6750546 + 6750526 6750566 41 CCAGCGCTTGACTTTGTCGCTGTCCAGCCCCCAGCTCCTGT CCAGCGCTTGACTTTGTCGCTTTCCAGCCCCCAGCTCCTGT < 41bp 0.50978972307593 0.839515130594393 0.31516194 0.39428422 prediction 0.659450815036927 Functional Gain - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6750546 chr5:6750547 synonymous SNV . 0 22 hPsi_associated_SNPs_27036 0 0 1 0 1 Nucleus 0.438718592848227 0.438718591940199 0 0 hPsi_site_20760 iPseU_CNN:0;iRNA_PseU:0 20761 chr1 16377482 16377482 1 + G A STAD 16377481 + 16377461 16377501 41 TCGACCCCCAGCACCTGTGGTGGGAATGGTACCACCCGCGG TCGACCCCCAGCACCTGTGGTAGGAATGGTACCACCCGCGG < 41bp 0.408119501973276 0.829724903758936 0.26873612 0.36793125 prediction 0.659449807517873 Functional Gain - CLCNKB ENSG00000184908 CDS Human protein_coding chr1:16377481 chr1:16377482 stopgain 0.536 0 22 hPsi_associated_SNPs_27037 0 0 0 0 1 exosome 0.438718591478341 0.438719127030706 0 0 hPsi_site_20761 iPseU_CNN:0;iRNA_PseU:0 20762 chr16 87723717 87723717 1 + G A COAD 87723716 + 87723696 87723736 41 AGTCACCCCCCGTGTTCACGTGGACTTCCCACCACCGGGCC AGTCACCCCCCGTGTTCACGTAGACTTCCCACCACCGGGCC < 41bp 0.460091041278214 0.829724796627669 0.29239875 0.5106735 prediction 0.659449593255339 Functional Gain - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87723716 chr16:87723717 stopgain 0.889 1 22 hPsi_associated_SNPs_27038 0 0 0 0 0 chromatin 0.438693800297289 0.438723152200215 0.021347 0 hPsi_site_20762 iPseU_CNN:0.021347;iRNA_PseU:0 20763 chr1 241731852 241731852 1 + G A UCEC 241731851 + 241731831 241731871 41 CCTGCCCAGCCCATGATATCTGTAAAGTGCTCTTCATTTCA CCTGCCCAGCCCATGATATCTATAAAGTGCTCTTCATTTCA < 41bp 0.425612264356762 0.829723265414875 0.22919771 0.26672465 prediction 0.65944653082975 Functional Gain - KMO ENSG00000117009 CDS Human protein_coding chr1:241731851 chr1:241731852 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_27039 0 0 0 0 2 Nucleus 0.43871859293005 0.438718592987359 0 0 hPsi_site_20763 iPseU_CNN:0;iRNA_PseU:0 20764 chr16 70390094 70390094 1 + G A ESCA 70390093 + 70390073 70390113 41 CACAAACCAAGTGGAAGTCCTGCAACGGGATCCAAACTCCC CACAAACCAAGTGGAAGTCCTACAACGGGATCCAAACTCCC < 41bp 0.461966402534045 0.829721759180394 0.4162641 0.8292934 prediction 0.659443518360789 Functional Gain - DDX19A ENSG00000168872 CDS Human protein_coding chr16:70390093 chr16:70390094 synonymous SNV . 0 22 hPsi_associated_SNPs_27040 0 0 1 0 2 Ribosome 0.438707881007829 0.438712840207906 0.6585868 0 hPsi_site_20764 iPseU_CNN:0.6585868;iRNA_PseU:0 20765 chr6 44108028 44108028 1 + G T rs184111384 44108027 + 44108007 44108047 41 GCACACCTCCTTCGCCTTCCTGTATCTGCTGCTCACCGTCT GCACACCTCCTTCGCCTTCCTTTATCTGCTGCTCACCGTCT < 41bp 0.515949085905036 0.845670162106217 0.293276 0.35217446 prediction 0.659442152402363 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44108027 chr6:44108028 synonymous SNV . 0 22 hPsi_associated_SNPs_27041 0 0 1 6 2 Ribosome 0.438686541694733 0.438718552592712 0 0 hPsi_site_20765 iPseU_CNN:0;iRNA_PseU:0 20766 chr13 113814395 113814395 1 + G A UCEC 113814394 + 113814374 113814414 41 GCGTGCGGGCTCCTATCTTCTGGAAGAACTCTTCGAGGGAA GCGTGCGGGCTCCTATCTTCTAGAAGAACTCTTCGAGGGAA < 41bp 0.412054359512814 0.82971884462626 0.29776645 0.5196061 prediction 0.659437689252519 Functional Gain - PROZ ENSG00000126231 CDS Human protein_coding chr13:113814394 chr13:113814395 synonymous SNV . 0 22 hPsi_associated_SNPs_27042 0 0 0 0 2 exosome 0.438718593008192 0.438718592995108 0.0392121999999999 0 hPsi_site_20766 iPseU_CNN:0.0392121999999999;iRNA_PseU:0 20767 chr1 152286003 152286003 1 + G A rs74129466 152286002 + 152285982 152286022 41 TTCCCCTGACCGGCCACGTGTGGACTCTTGGTGGCTCTGCT TTCCCCTGACCGGCCACGTGTAGACTCTTGGTGGCTCTGCT < 41bp 0.448509499007564 0.829718439324578 0.32359833 0.48995984 prediction 0.659436878649156 Functional Gain - FLG ENSG00000143631 CDS Human protein_coding chr1:152286002 chr1:152286003 synonymous SNV . 0 22 hPsi_associated_SNPs_27043 0 0 0 0 0 exosome 0.438727413211862 0.438712443064776 0 0 hPsi_site_20767 iPseU_CNN:0;iRNA_PseU:0 20768 chr1 231131671 231131671 1 + C A GBM 231131670 + 231131650 231131690 41 TTTGGGAACATGACTACACATCTGTGTGCCTCAAACTCATT TTTGGGAACATGACTACACATATGTGTGCCTCAAACTCATT < 41bp 0.478256669037132 0.829712075095978 0.16034088 0.24787125 prediction 0.659424150191955 Functional Gain - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231131670 chr1:231131671 nonsynonymous SNV 0.777 0 22 hPsi_associated_SNPs_27044 0 0 1 0 1 Endoplasmic reticulum 0.438068786667114 0.43854515907588 0 0 hPsi_site_20768 iPseU_CNN:0;iRNA_PseU:0 20769 chr2 74881639 74881639 1 + C A CESC 74881638 + 74881618 74881658 41 TCGGTGCCCAGAACCTCGCTTCCAATCTCTGGTAAGGCGCG TCGGTGCCCAGAACCTCGCTTACAATCTCTGGTAAGGCGCG < 41bp 0.515784778786438 0.845490091198245 0.8489206 0.8493153 prediction 0.659410624823614 Functional Gain - SEMA4F ENSG00000135622 CDS Human protein_coding chr2:74881638 chr2:74881639 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_27045 0 0 1 0 1 nucleus 0.438719172412656 0.438718617464472 0.00078939999999994 0 hPsi_site_20769 iPseU_CNN:0.00078939999999994;iRNA_PseU:0 20770 chr1 248084625 248084625 1 + C A rs6692365 248084624 + 248084604 248084644 41 TGGTGCGCAGATCTTCTTCCTCCCCACACTGGGTGGTGGAG TGGTGCGCAGATCTTCTTCCTACCCACACTGGGTGGTGGAG < 41bp 0.485843861021292 0.829703661119202 0.21953854 0.4836764 prediction 0.659407322238404 Functional Gain - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248084624 chr1:248084625 synonymous SNV . 0 22 hPsi_associated_SNPs_27046 0 0 0 0 0 exosome 0.438755754540838 0.438719014750748 0 0 hPsi_site_20770 iPseU_CNN:0;iRNA_PseU:0 20771 chr16 3454559 3454559 1 + C A COAD 3454558 + 3454538 3454578 41 AGAGCTCTCCAGCAGAGCCTTCCCAGGCAGGAGCTTATGAC AGAGCTCTCCAGCAGAGCCTTACCAGGCAGGAGCTTATGAC < 41bp 0.473147263458747 0.829701679865563 0.22443259 0.33624583 prediction 0.659403359731126 Functional Gain - ZNF174 ENSG00000103343;ENSG00000262621 CDS Human other chr16:3454558 chr16:3454559 nonsynonymous SNV 0.107 0 22 hPsi_associated_SNPs_27047 0 0 0 0 1 Ribosome 0.438725248777375 0.438719212629499 0 0 hPsi_site_20771 iPseU_CNN:0;iRNA_PseU:0 20772 chr1 55070051 55070051 1 + G A ESCA 55070050 + 55070030 55070070 41 CTACAATAACGTCTCCTCCTTGAAGATGCTTGTGGCCAAGG CTACAATAACGTCTCCTCCTTAAAGATGCTTGTGGCCAAGG < 41bp 0.413523319297996 0.829695927340933 0.37585258 0.6687604 prediction 0.659391854681866 Functional Gain - ACOT11 ENSG00000162390 CDS Human protein_coding chr1:55070050 chr1:55070051 synonymous SNV . 0 22 hPsi_associated_SNPs_27048 0 0 0 0 2 chromatin 0.438718630222937 0.438718676892088 0.3375208 0 hPsi_site_20772 iPseU_CNN:0.3375208;iRNA_PseU:0 20773 chr12 58151979 58151979 1 + G A UCEC 58151978 + 58151958 58151998 41 TCCTGGTTGCCAGCATCTCCTGGCTCATCTGGTCCTCACTC TCCTGGTTGCCAGCATCTCCTAGCTCATCTGGTCCTCACTC < 41bp 0.418815386322086 0.829694274235877 0.2640924 0.36030272 prediction 0.659388548471754 Functional Gain - MARCH9 ENSG00000139266 CDS Human protein_coding chr12:58151978 chr12:58151979 stopgain 1.000 1 22 hPsi_associated_SNPs_27049 0 0 1 0 1 Ribosome 0.438658803027462 0.438732388770278 0 0 hPsi_site_20773 iPseU_CNN:0;iRNA_PseU:0 20774 chr17 20332056 20332056 1 + G A rs117113726 20332055 + 20332035 20332075 41 TGAGCCGAGGGCATATGCGGTGGGGGCAGCCAACCAGAGCT TGAGCCGAGGGCATATGCGGTAGGGGCAGCCAACCAGAGCT < 41bp 0.547412755822552 0.877105923088824 0.20659593 0.32932234 prediction 0.659386334532543 Functional Gain - USP32P3 ENSG00000189423 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:20332055 chr17:20332056 . . 0 22 hPsi_associated_SNPs_27050 0 0 0 0 0 unknown 0.438718592989584 0.438718592995091 0 0 hPsi_site_20774 iPseU_CNN:0;iRNA_PseU:0 20775 chr14 20666079 20666079 1 + G A THCA 20666078 + 20666058 20666098 41 ACTTGGTTTCATCTGGTTCTTGATTCCTATCGTCAACATCT ACTTGGTTTCATCTGGTTCTTAATTCCTATCGTCAACATCT < 41bp 0.451573752179469 0.829686393430916 0.23016918 0.5418828 prediction 0.659372786861832 Functional Gain - OR11G2 ENSG00000196832 CDS Human protein_coding chr14:20666078 chr14:20666079 synonymous SNV . 0 22 hPsi_associated_SNPs_27051 0 0 0 0 0 unknown 0.438718592995102 0.438718593866364 0.0837656 0 hPsi_site_20775 iPseU_CNN:0.0837656;iRNA_PseU:0 20776 chr1 12704586 12704586 1 + G A rs114844302 12704585 + 12704565 12704605 41 CATGGCTGTCCCCTGGCTAGTGCTACTCTTGGCATTGCCCA CATGGCTGTCCCCTGGCTAGTACTACTCTTGGCATTGCCCA < 41bp 0.459867668944029 0.829685934108969 0.39009947 0.79643947 prediction 0.659371868217937 Functional Gain - AADACL4 ENSG00000204518 CDS Human protein_coding chr1:12704585 chr1:12704586 synonymous SNV . 0 22 hPsi_associated_SNPs_27052 0 0 0 0 0 chromatin 0.438718434821439 0.438715693134545 0.59287894 0 hPsi_site_20776 iPseU_CNN:0.59287894;iRNA_PseU:0 20777 chrX 130678455 130678455 1 + G A UCEC 130678454 + 130678434 130678474 41 CCTGCGTTATTCAGTGGTTATGAATGGCCCAGTATGTGTCT CCTGCGTTATTCAGTGGTTATAAATGGCCCAGTATGTGTCT < 41bp 0.440015687838246 0.82967963616383 0.2579558 0.6784971 prediction 0.659359272327661 Functional Gain - OR13H1 ENSG00000171054 CDS Human protein_coding chrX:130678454 chrX:130678455 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_27053 0 0 0 0 0 exosome 0.438724271665215 0.438719398031551 0.3569942 0 hPsi_site_20777 iPseU_CNN:0.3569942;iRNA_PseU:0 20778 chr5 129240643 129240643 1 + G A SKCM 129240642 + 129240622 129240662 41 CTGAGCGAGAGGAAGAGACGTGGCTCCAGCCTCTGCTCCTA CTGAGCGAGAGGAAGAGACGTAGCTCCAGCCTCTGCTCCTA < 41bp 0.447269176857955 0.829678673095343 0.2323721 0.32019395 prediction 0.659357346190685 Functional Gain - CHSY3 ENSG00000198108 CDS Human protein_coding chr5:129240642 chr5:129240643 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_27054 0 0 0 0 0 exosome 0.438718592173724 0.438718593023272 0 0 hPsi_site_20778 iPseU_CNN:0;iRNA_PseU:0 20779 chr10 25887824 25887824 1 + C A UCEC 25887823 + 25887803 25887843 41 AAGATGAGAAGCTTTTGATTTCCAAGACTCCAGTTCTCCCA AAGATGAGAAGCTTTTGATTTACAAGACTCCAGTTCTCCCA < 41bp 0.496274935691222 0.829671315316783 0.67832994 0.7066033 prediction 0.659342630633566 Functional Gain - GPR158 ENSG00000151025 CDS Human protein_coding chr10:25887823 chr10:25887824 nonsynonymous SNV 0.096 1 22 hPsi_associated_SNPs_27055 0 0 0 0 0 Endoplasmic reticulum 0.438718619849763 0.438718775060345 0.0565467200000001 0 hPsi_site_20779 iPseU_CNN:0.0565467200000001;iRNA_PseU:0 20780 chr2 241991839 241991839 1 + C A UCEC 241991838 + 241991818 241991858 41 CGAGGACCGGGACACGGATTTCTTCTGCCACTGCCAAGCAG CGAGGACCGGGACACGGATTTATTCTGCCACTGCCAAGCAG < 41bp 0.461344229376555 0.829670801387869 0.5280763 0.78942764 prediction 0.659341602775738 Functional Gain - SNED1 ENSG00000162804 CDS Human protein_coding chr2:241991838 chr2:241991839 nonsynonymous SNV 0.919 2 22 hPsi_associated_SNPs_27056 0 0 1 0 2 nucleus 0.438718593314882 0.438695679947381 0.52270268 0 hPsi_site_20780 iPseU_CNN:0.52270268;iRNA_PseU:0 20781 chr11 5632245 5632245 1 + C A COAD 5632244 + 5632224 5632264 41 CAATTCACTGGGACCTACATTCTCTTTCAACCATTTTGCTC CAATTCACTGGGACCTACATTATCTTTCAACCATTTTGCTC < 41bp 0.480595779572821 0.829670425481671 0.33749884 0.37623137 prediction 0.659340850963341 Functional Gain - TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632244 chr11:5632245 nonsynonymous SNV 0.123 0 22 hPsi_associated_SNPs_27057 0 0 1 1 0 Nucleus 0.438573072725789 0.439196070664163 0 0 hPsi_site_20781 iPseU_CNN:0;iRNA_PseU:0 20782 chr11 551905 551905 1 + G A COAD 551904 + 551884 551924 41 GCCATGCTGTCTCTTGCAGGTGCTGGCCAAGTCCTCTGTGG GCCATGCTGTCTCTTGCAGGTACTGGCCAAGTCCTCTGTGG < 41bp 0.437251792393995 0.829668800885902 0.3831293 0.91506386 prediction 0.659337601771803 Functional Gain - LRRC56 ENSG00000161328 CDS Human protein_coding chr11:551904 chr11:551905 nonsynonymous SNV 0.968 0 22 hPsi_associated_SNPs_27058 0 0 0 0 2 Nucleus 0.43871330524587 0.439052297849606 0.83012772 0 hPsi_site_20782 iPseU_CNN:0.83012772;iRNA_PseU:0 20783 chrX 78216762 78216762 1 + G A SKCM 78216761 + 78216741 78216781 41 CTGCGGATGGTGTTCATGTGTGCTGCAGTCTTCTTCATCTG CTGCGGATGGTGTTCATGTGTACTGCAGTCTTCTTCATCTG < 41bp 0.565926884031437 0.895593975712053 0.38164344 0.6854155 prediction 0.659334183361232 Functional Gain - P2RY10 ENSG00000078589 CDS Human protein_coding chrX:78216761 chrX:78216762 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_27059 0 0 0 0 0 exosome 0.439969988008707 0.439335990056535 0.370831 0 hPsi_site_20783 iPseU_CNN:0.370831;iRNA_PseU:0 20784 chr1 150933493 150933493 1 + G A BLCA 150933492 + 150933472 150933512 41 GAACAAGGTGGCCTCATGGTTGAGCTGCAATAGTGTCAGTG GAACAAGGTGGCCTCATGGTTAAGCTGCAATAGTGTCAGTG < 41bp 0.421294988352446 0.829666752659869 0.4173841 0.75731987 prediction 0.659333505319737 Functional Gain - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150933492 chr1:150933493 synonymous SNV . 0 22 hPsi_associated_SNPs_27060 0 0 1 0 0 Nucleus 0.436086979717602 0.443716287952199 0.51463974 0 hPsi_site_20784 iPseU_CNN:0.51463974;iRNA_PseU:0 20785 chr7 86815191 86815191 1 + C A UCEC 86815190 + 86815170 86815210 41 GAAAATGACATTAACTGGGATCTGTTAGCTGAGGGATGGAG GAAAATGACATTAACTGGGATATGTTAGCTGAGGGATGGAG < 41bp 0.477127370823344 0.829664420582789 0.3482517 0.40711844 prediction 0.659328841165579 Functional Gain - DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86815190 chr7:86815191 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_27061 0 0 1 1 1 Nucleus 0.438719266577423 0.438718592973398 0 0 hPsi_site_20785 iPseU_CNN:0;iRNA_PseU:0 20786 chr11 93462654 93462654 1 + G A LIHC 93462653 + 93462633 93462673 41 GAAGCCTCAGATTATCCAGCTGTATCAGAACTTTCCATAGA GAAGCCTCAGATTATCCAGCTATATCAGAACTTTCCATAGA < 41bp 0.430020768232394 0.829660124570575 0.3674718 0.42540285 prediction 0.65932024914115 Functional Gain - CEP295 ENSG00000166004 CDS Human protein_coding chr11:93462653 chr11:93462654 nonsynonymous SNV 0.042 0 22 hPsi_associated_SNPs_27062 0 0 0 0 2 Nucleus 0.438682862392032 0.438730609358435 0 0 hPsi_site_20786 iPseU_CNN:0;iRNA_PseU:0 20787 chrX 100668053 100668053 1 + C A UCEC 100668052 + 100668032 100668072 41 GCAACACAGATATGTGGAGCTCTTCTTAAATTCTACTGCAG GCAACACAGATATGTGGAGCTATTCTTAAATTCTACTGCAG < 41bp 0.486418527787827 0.829659550026299 0.13459438 0.39567053 prediction 0.659319100052598 Functional Gain - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668052 chrX:100668053 synonymous SNV . 0 22 hPsi_associated_SNPs_27063 0 0 1 0 0 Cytosol 0.438723253444696 0.438698819606087 0 0 hPsi_site_20787 iPseU_CNN:0;iRNA_PseU:0 20788 chr3 41275178 41275178 1 + G A UCEC 41275177 + 41275157 41275197 41 GGGTGGTATAGAGGCTCTTGTGCGTACTGTCCTTCGGGCTG GGGTGGTATAGAGGCTCTTGTACGTACTGTCCTTCGGGCTG < 41bp 0.574903148009034 0.904560870898411 0.12225303 0.2672766 prediction 0.659315445778755 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275177 chr3:41275178 synonymous SNV . 0 22 hPsi_associated_SNPs_27064 0 0 1 0 0 Nucleus 0.438718166781202 0.438717622445955 0 0 hPsi_site_20788 iPseU_CNN:0;iRNA_PseU:0 20789 chr14 70497381 70497381 1 + C A rs11540035 70497380 + 70497360 70497400 41 GGCATTGCTGTTTGTTTATTTCTCTCCCTCTGCCTGCTGTG GGCATTGCTGTTTGTTTATTTATCTCCCTCTGCCTGCTGTG < 41bp 0.503718996643201 0.83336395202135 0.29913023 0.58352953 prediction 0.659289910756299 Functional Gain - SMOC1 ENSG00000198732 UTR3 Human protein_coding chr14:70497380 chr14:70497381 . . 0 22 hPsi_associated_SNPs_27065 0 0 1 3 0 cytosol 0.438800447602463 0.438576992278047 0.16705906 0 hPsi_site_20789 iPseU_CNN:0.16705906;iRNA_PseU:0 20790 chr8 9912052 9912052 1 + G A UCEC 9912051 + 9912031 9912071 41 TCTCGGCCACCCGGAGGGCTTGCCAGCTCCTCCTCCTCCAC TCTCGGCCACCCGGAGGGCTTACCAGCTCCTCCTCCTCCAC < 41bp 0.539629107416309 0.869269135576233 0.3800834 0.54959124 prediction 0.659280056319849 Functional Gain - MSRA ENSG00000175806 CDS Human protein_coding chr8:9912051 chr8:9912052 nonsynonymous SNV 0.014 0 22 hPsi_associated_SNPs_27066 0 0 1 0 0 Nucleus 0.438718592995083 0.438718592971665 0.0991824800000001 0 hPsi_site_20790 iPseU_CNN:0.0991824800000001;iRNA_PseU:0 20791 chr9 84609917 84609917 1 + G A UCEC 84609916 + 84609896 84609936 41 CATTTAAGGGGAAGATACTGTGTCAAAGCCATCCCCAATCC CATTTAAGGGGAAGATACTGTATCAAAGCCATCCCCAATCC < 41bp 0.449426998233359 0.8296367068052 0.48853168 0.77344406 prediction 0.6592734136104 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84609916 chr9:84609917 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27067 0 0 0 0 0 exosome 0.439009816309633 0.438778332441745 0.54688812 0 hPsi_site_20791 iPseU_CNN:0.54688812;iRNA_PseU:0 20792 chr20 18163902 18163902 1 + C A GBM 18163901 + 18163881 18163921 41 TTATGTGCGGCCAAATCACATCCCAACGATCAACTCCATGT TTATGTGCGGCCAAATCACATACCAACGATCAACTCCATGT < 41bp 0.535307808785893 0.864944025279973 0.3406952 0.8477263 prediction 0.65927243298816 Functional Gain - KAT14 ENSG00000149474 CDS Human protein_coding chr20:18163901 chr20:18163902 synonymous SNV . 0 22 hPsi_associated_SNPs_27068 0 0 0 0 1 Nucleus 0.438685818175399 0.439127807147053 0.6954526 0 hPsi_site_20792 iPseU_CNN:0.6954526;iRNA_PseU:0 20793 chr11 73106186 73106186 1 + G A rs34304845 73106185 + 73106165 73106205 41 AAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGCTG AAGTTCAATGGTGTCTGAGGTAAAGACCATCACGGAGGCTG < 41bp 0.573328472489183 0.902963801513003 0.39106005 0.74619305 prediction 0.65927065804764 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73106185 chr11:73106186 synonymous SNV . 0 22 hPsi_associated_SNPs_27069 0 0 0 0 1 chromatin 0.438772075968615 0.438718565546797 0.4923861 0 hPsi_site_20793 iPseU_CNN:0.4923861;iRNA_PseU:0 20794 chr15 41961356 41961356 1 + C A UCEC 41961355 + 41961335 41961375 41 CAATAGTATGTGGAATGAGTTCTATCATCGAAGCACAGAGA CAATAGTATGTGGAATGAGTTATATCATCGAAGCACAGAGA < 41bp 0.510055562049063 0.839687947914805 0.7845835 0.6928855 prediction 0.659264771731483 Functional Gain - MGA ENSG00000174197 CDS Human protein_coding chr15:41961355 chr15:41961356 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27070 0 0 1 0 0 Cytosol 0.438848842954563 0.442434517459934 0 0 hPsi_site_20794 iPseU_CNN:0;iRNA_PseU:0 20795 chr1 32937156 32937156 1 + G A COAD 32937155 + 32937135 32937175 41 TTGGAAGGAAGACCAGAAGGTGCAGGAGTAGCCATGAGTTC TTGGAAGGAAGACCAGAAGGTACAGGAGTAGCCATGAGTTC < 41bp 0.417650614272904 0.82963197624686 0.26878542 0.8409611 prediction 0.65926395249372 Functional Gain - ZBTB8B ENSG00000254553;ENSG00000273274 CDS Human other chr1:32937155 chr1:32937156 nonsynonymous SNV 0.508 0 22 hPsi_associated_SNPs_27071 0 0 0 0 1 exosome 0.43871859299509 0.438718592987223 0.6819222 0 hPsi_site_20795 iPseU_CNN:0.6819222;iRNA_PseU:0 20796 chr8 120977572 120977572 1 + C A HNSC 120977571 + 120977551 120977591 41 GAATTCCTGGACTGGCTGGTTCAGGAAGGTGAGGCCACCAC GAATTCCTGGACTGGCTGGTTAAGGAAGGTGAGGCCACCAC < 41bp 0.541890043336191 0.871518637460497 0.21090269 0.35417122 prediction 0.659257188248611 Functional Gain - DEPTOR ENSG00000155792 CDS Human protein_coding chr8:120977571 chr8:120977572 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_27072 0 0 0 0 1 exosome 0.438712986791144 0.438050505853933 0 0 hPsi_site_20796 iPseU_CNN:0;iRNA_PseU:0 20797 chr19 54695773 54695773 1 + G A HNSC 54695772 + 54695752 54695792 41 AGCCAGGCTGCCAAAGAGGATGAGACCAGTGATGGCCAGGC AGCCAGGCTGCCAAAGAGGATAAGACCAGTGATGGCCAGGC < 41bp 0.410776658380736 0.829620195855463 0.2765307 0.4419162 prediction 0.659240391710926 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54695772 chr19:54695773 nonsynonymous SNV 0.077 0 22 hPsi_associated_SNPs_27073 0 0 1 0 1 Ribosome 0.438718589881304 0.438718592994978 0 0 hPsi_site_20797 iPseU_CNN:0;iRNA_PseU:0 20798 chr11 121000473 121000473 1 + C A READ 121000472 + 121000452 121000492 41 GTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTC GTCCAGTACTCAGACATAGGTATATTGTACATCCGGCTGTC < 41bp 0.533897828468902 0.863517937493152 0.34829652 0.4517973 prediction 0.659240218048501 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:121000472 chr11:121000473 nonsynonymous SNV 0.052 0 22 hPsi_associated_SNPs_27074 0 0 0 0 0 exosome 0.438705370036874 0.438719020200612 0 0 hPsi_site_20798 iPseU_CNN:0;iRNA_PseU:0 20799 chr1 43739006 43739006 1 + G A COAD 43739005 + 43738985 43739025 41 AGCATCTCAGGACAGTTGTCTGCTGGCCGGCGTCACGAGAC AGCATCTCAGGACAGTTGTCTACTGGCCGGCGTCACGAGAC < 41bp 0.567631709816825 0.897248404227137 0.26405573 0.7500826 prediction 0.659233388820624 Functional Gain - TMEM125 ENSG00000179178 CDS Human protein_coding chr1:43739005 chr1:43739006 nonsynonymous SNV 0.912 0 22 hPsi_associated_SNPs_27075 0 0 0 0 0 Ribosome 0.438815528732216 0.438788037676798 0.5001652 0 hPsi_site_20799 iPseU_CNN:0.5001652;iRNA_PseU:0 20800 chr10 135370622 135370622 1 + G T COAD 135370623 - 135370603 135370643 41 AGGAGTGCAAGGAGAGAATTTCTGCCCTGAACTTGCAGATT AGGAGTGCAAGGAGAGAATTTATGCCCTGAACTTGCAGATT < 41bp 0.537195501810053 0.866812160525196 0.30452675 0.68458945 prediction 0.659233317430286 Functional Gain - SYCE1 ENSG00000171772 CDS Human protein_coding chr10:135370623 chr10:135370622 nonsynonymous SNV 0.935 1 22 hPsi_associated_SNPs_27076 0 0 0 0 2 exosome 0.438721200508496 0.438658819869331 0.3691789 0 hPsi_site_20800 iPseU_CNN:0.3691789;iRNA_PseU:0 20801 chr19 47844851 47844851 1 + C A LUSC 47844850 + 47844830 47844870 41 GGCGGCCCCGAACTCCGCACTCCTGGCCAGGGCCCTGCGGG GGCGGCCCCGAACTCCGCACTACTGGCCAGGGCCCTGCGGG < 41bp 0.477223465122589 0.82961350874187 0.2368361 0.5185852 prediction 0.65922701748374 Functional Gain - C5AR2 ENSG00000134830 CDS Human protein_coding chr19:47844850 chr19:47844851 synonymous SNV . 0 22 hPsi_associated_SNPs_27077 0 0 0 0 0 exosome 0.438718919576 0.438718626630427 0.0371703999999999 0 hPsi_site_20801 iPseU_CNN:0.0371703999999999;iRNA_PseU:0 20802 chr5 40681629 40681629 1 + G A BLCA 40681628 + 40681608 40681648 41 CATCGACTGGACCACCAACGTGACGGCGCACGCCGCCTACT CATCGACTGGACCACCAACGTAACGGCGCACGCCGCCTACT < 41bp 0.418454581562247 0.829613098435481 0.2630831 0.61544925 prediction 0.659226196870962 Functional Gain - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681628 chr5:40681629 synonymous SNV . 0 22 hPsi_associated_SNPs_27078 0 0 0 0 0 Cytosol 0.438718593106794 0.438718605903916 0.2308985 0 hPsi_site_20802 iPseU_CNN:0.2308985;iRNA_PseU:0 20803 chr8 22974347 22974347 1 + G A BLCA 22974346 + 22974326 22974366 41 GGGACTCCTGCCCCAGCTGCTGAAGAGACAATGACCACCAG GGGACTCCTGCCCCAGCTGCTAAAGAGACAATGACCACCAG < 41bp 0.488361035119108 0.829612993576142 0.33480224 0.5729764 prediction 0.659225987152285 Functional Gain - TNFRSF10C ENSG00000173535 CDS Human protein_coding chr8:22974346 chr8:22974347 nonsynonymous SNV 0.020 1 22 hPsi_associated_SNPs_27079 0 0 0 0 0 exosome 0.438717551134264 0.438718592601665 0.1459528 0 hPsi_site_20803 iPseU_CNN:0.1459528;iRNA_PseU:0 20804 chr11 67079064 67079064 1 + C A GBM 67079063 + 67079043 67079083 41 TATCCTCACACCTGTCCAGGTCTTCTCTTCCCACGAGTCTT TATCCTCACACCTGTCCAGGTATTCTCTTCCCACGAGTCTT < 41bp 0.512647611755484 0.842259580319293 0.41800413 0.7898568 prediction 0.659223937127618 Functional Gain - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67079063 chr11:67079064 synonymous SNV . 0 22 hPsi_associated_SNPs_27080 0 0 0 0 1 nucleus 0.438718592985659 0.438718427272972 0.5797136 0 hPsi_site_20804 iPseU_CNN:0.5797136;iRNA_PseU:0 20805 chr20 61574378 61574378 1 + C A LUAD 61574377 + 61574357 61574397 41 CGGAGAAGTTTCGAATGGAATCTGGAATCGAACCTAGTGTG CGGAGAAGTTTCGAATGGAATATGGAATCGAACCTAGTGTG < 41bp 0.473414022652794 0.82960958654773 0.28794953 0.6666249 prediction 0.659219173095461 Functional Gain - GID8 ENSG00000101193 CDS Human protein_coding chr20:61574377 chr20:61574378 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27081 0 0 1 0 1 Ribosome 0.438718645896651 0.438645264905888 0.3332498 0 hPsi_site_20805 iPseU_CNN:0.3332498;iRNA_PseU:0 20806 chr12 112321429 112321429 1 + G T rs116086945 112321428 + 112321408 112321448 41 GGTGATTATCTATGTGATGCTGTGCGGATACCCTCCTTTTT GGTGATTATCTATGTGATGCTTTGCGGATACCCTCCTTTTT < 41bp 0.513364426232472 0.842970623279837 0.28870583 0.65798694 prediction 0.659212394094731 Functional Gain - MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321428 chr12:112321429 synonymous SNV . 0 22 hPsi_associated_SNPs_27082 0 0 1 0 1 chromatin 0.438718593006509 0.438718593153612 0.31597388 0 hPsi_site_20806 iPseU_CNN:0.31597388;iRNA_PseU:0 20807 chr9 139746892 139746892 1 + G A UCEC 139746891 + 139746871 139746911 41 GCCTCTGTCCAGCCACCTGCTGCCCGCCTTGGTCCTGTTCC GCCTCTGTCCAGCCACCTGCTACCCGCCTTGGTCCTGTTCC < 41bp 0.439896735499588 0.829606050667908 0.17401496 0.37951216 prediction 0.659212101335815 Functional Gain - MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139746891 chr9:139746892 synonymous SNV . 0 22 hPsi_associated_SNPs_27083 0 0 1 0 1 chromatin 0.438719430438396 0.43871527258102 0 0 hPsi_site_20807 iPseU_CNN:0;iRNA_PseU:0 20808 chr14 88904673 88904673 1 + C A UCEC 88904672 + 88904652 88904692 41 ACCCTCCCAATCTGTTCAGTTCTCCAGTGTCAAAGGCGACA ACCCTCCCAATCTGTTCAGTTATCCAGTGTCAAAGGCGACA < 41bp 0.489610609155357 0.829605731141293 0.2386508 0.4745434 prediction 0.659211462282587 Functional Gain - SPATA7 ENSG00000042317 CDS Human protein_coding chr14:88904672 chr14:88904673 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_27084 0 0 0 0 1 Nucleus 0.438703568592991 0.438714863963485 0 0 hPsi_site_20808 iPseU_CNN:0;iRNA_PseU:0 20809 chr2 3483103 3483103 1 + G A KIRP 3483102 + 3483082 3483122 41 GCACTACCTGCACGAGAGCGTGCTCTTCAACCTGACCACCA GCACTACCTGCACGAGAGCGTACTCTTCAACCTGACCACCA < 41bp 0.567254477286271 0.896858976402478 0.27751586 0.9530108 prediction 0.659208998232416 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3483102 chr2:3483103 synonymous SNV . 0 22 hPsi_associated_SNPs_27085 0 0 1 0 0 Ribosome 0.438648315730116 0.438718035983569 0.9060216 0 hPsi_site_20809 iPseU_CNN:0.9060216;iRNA_PseU:0 20810 chr1 244218431 244218431 1 + G A LUSC 244218430 + 244218410 244218450 41 AGCCCTACACATGCACCCAGTGCGGCAAGAGCTTCCAGTAC AGCCCTACACATGCACCCAGTACGGCAAGAGCTTCCAGTAC < 41bp 0.430299309987981 0.829603046068943 0.2724808 0.42727792 prediction 0.659206092137886 Functional Gain - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218430 chr1:244218431 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27086 0 0 1 0 0 Cytosol 0.434719693023065 0.437932081276924 0 0 hPsi_site_20810 iPseU_CNN:0;iRNA_PseU:0 20811 chr20 31647832 31647832 1 + C A UCEC 31647831 + 31647811 31647851 41 CCTGGGCCACATCAGCCTGTTCTCAGGGTGAGTCTGCAGGT CCTGGGCCACATCAGCCTGTTATCAGGGTGAGTCTGCAGGT < 41bp 0.471646133157045 0.829602006724218 0.53169805 0.82848686 prediction 0.659204013448436 Functional Gain - BPIFB3 ENSG00000186190 CDS Human protein_coding chr20:31647831 chr20:31647832 nonsynonymous SNV 0.477 0 22 hPsi_associated_SNPs_27087 0 0 0 0 0 exosome 0.438718575635652 0.43871667089535 0.59357762 0 hPsi_site_20811 iPseU_CNN:0.59357762;iRNA_PseU:0 20812 chr3 112714075 112714075 1 + G A rs201459759 112714074 + 112714054 112714094 41 TTTAGAGCACCTGAAGATTTTGTTGACATGGTAGAGACCTA TTTAGAGCACCTGAAGATTTTATTGACATGGTAGAGACCTA < 41bp 0.430620746869346 0.829597920142113 0.3011766 0.32507488 prediction 0.659195840284226 Functional Gain - GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714074 chr3:112714075 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_27088 0 0 1 1 2 Ribosome 0.438717103987006 0.438710737769373 0 0 hPsi_site_20812 iPseU_CNN:0;iRNA_PseU:0 20813 chr11 73611423 73611423 1 + G T CESC 73611422 + 73611402 73611442 41 CAGCTGAAGATATGGTCAGCTGAAGATGCTAGCTGCGTGGT CAGCTGAAGATATGGTCAGCTTAAGATGCTAGCTGCGTGGT < 41bp 0.49082967208724 0.829597750658491 0.24183273 0.58693147 prediction 0.659195501316983 Functional Gain - PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73611422 chr11:73611423 stopgain 0.999 1 22 hPsi_associated_SNPs_27089 0 0 0 4 1 Ribosome 0.404859562610362 0.440008461639491 0.17386294 0 hPsi_site_20813 iPseU_CNN:0.17386294;iRNA_PseU:0 20814 chr9 34647938 34647938 1 + G A THCA 34647937 + 34647917 34647957 41 TCAGTCACAGAGGAGCTGGGTGCCCAGTACCCTTGGGTGCA TCAGTCACAGAGGAGCTGGGTACCCAGTACCCTTGGGTGCA < 41bp 0.575028724204899 0.90462332149994 0.12472892 0.67110807 prediction 0.659189194590082 Functional Gain - GALT ENSG00000213930 CDS Human protein_coding chr9:34647937 chr9:34647938 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_27090 0 0 1 0 1 Cytosol 0.438718593018714 0.438718654185278 0.34221614 0 hPsi_site_20814 iPseU_CNN:0.34221614;iRNA_PseU:0 20815 chr19 32959681 32959681 1 + C A UCEC 32959680 + 32959660 32959700 41 ACTCTCCGAGTTGAGAGAATTCTATGATCCAGATACAGTGG ACTCTCCGAGTTGAGAGAATTATATGATCCAGATACAGTGG < 41bp 0.480352542396692 0.829591069077627 0.5789318 0.56718075 prediction 0.659182138155254 Functional Gain - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32959680 chr19:32959681 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27091 0 0 1 2 2 cytosol 0.438888271711696 0.444202612985355 0 0 hPsi_site_20815 iPseU_CNN:0;iRNA_PseU:0 20816 chr17 74774371 74774371 1 + C A UCEC 74774370 + 74774350 74774390 41 GTTTTTTGGAACAATTTCTTTCTTCACTGTGGAATGGGAAG GTTTTTTGGAACAATTTCTTTATTCACTGTGGAATGGGAAG < 41bp 0.516774074266753 0.846362607454881 0.3152008 0.23625803 prediction 0.659177066376258 Functional Gain - MFSD11 ENSG00000092931 CDS Human protein_coding chr17:74774370 chr17:74774371 nonsynonymous SNV 0.798 4 22 hPsi_associated_SNPs_27092 0 0 1 0 0 Endoplasmic reticulum 0.438816651948186 0.438613772676407 0 0 hPsi_site_20816 iPseU_CNN:0;iRNA_PseU:0 20817 chr11 62439585 62439585 1 + G A BLCA 62439584 + 62439564 62439604 41 GCGCCGGCGGGAGGTCACCGTGAGACCGGACTTGCCTCCGT GCGCCGGCGGGAGGTCACCGTAAGACCGGACTTGCCTCCGT < 41bp 0.457366242671816 0.829587032479512 0.2849244 0.5886372 prediction 0.659174064959025 Functional Gain - UQCC3 ENSG00000204922 CDS Human protein_coding chr11:62439584 chr11:62439585 synonymous SNV . 0 22 hPsi_associated_SNPs_27093 0 0 1 0 0 Ribosome 0.43881420309073 0.438718203493115 0.1772744 0 hPsi_site_20817 iPseU_CNN:0.1772744;iRNA_PseU:0 20818 chr16 2546833 2546833 1 + C A UCEC 2546832 + 2546812 2546852 41 CCTCTGCTACTTCGCCCGGGTCTTTGACGTCTTCCTGGTGG CCTCTGCTACTTCGCCCGGGTATTTGACGTCTTCCTGGTGG < 41bp 0.46473642715811 0.829583968715444 0.5955915 0.86411 prediction 0.659167937430887 Functional Gain - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546832 chr16:2546833 synonymous SNV . 0 22 hPsi_associated_SNPs_27094 0 0 1 0 0 Cytosol 0.438718590113917 0.438718662107945 0.537037 0 hPsi_site_20818 iPseU_CNN:0.537037;iRNA_PseU:0 20819 chr1 159785333 159785333 1 + C A UCEC 159785332 + 159785312 159785352 41 CAACTCTTCCACAGGACAGTTCTATCATCTGTGCGGAGGTG CAACTCTTCCACAGGACAGTTATATCATCTGTGCGGAGGTG < 41bp 0.510202136427269 0.839784172176029 0.6696221 0.56252927 prediction 0.65916407149752 Functional Gain - FCRL6 ENSG00000181036 CDS Human protein_coding chr1:159785332 chr1:159785333 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_27095 0 0 0 0 2 exosome 0.438742385251124 0.440076566830203 0 0 hPsi_site_20819 iPseU_CNN:0;iRNA_PseU:0 20820 chr2 27464928 27464928 1 + G A UCEC 27464927 + 27464907 27464947 41 CGAATCCCTGGCTGACTCCGTGCAGACCATGAGCTGCTATG CGAATCCCTGGCTGACTCCGTACAGACCATGAGCTGCTATG < 41bp 0.429752294815038 0.829579736096004 0.5976279 0.82934666 prediction 0.659159472192009 Functional Gain - CAD ENSG00000084774 CDS Human protein_coding chr2:27464927 chr2:27464928 synonymous SNV . 0 22 hPsi_associated_SNPs_27096 0 0 1 0 1 Exosome 0.434977038631643 0.438341268746172 0.46343752 0 hPsi_site_20820 iPseU_CNN:0.46343752;iRNA_PseU:0 20821 chr22 45258305 45258305 1 + G A SKCM 45258304 + 45258284 45258324 41 GAACTGCTGATCGAGTACTATGAAAAGATCTTCAGCACCCC GAACTGCTGATCGAGTACTATAAAAAGATCTTCAGCACCCC < 41bp 0.567736548849403 0.897315811398923 0.22753808 0.25343058 prediction 0.65915852509904 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45258304 chr22:45258305 nonsynonymous SNV 0.201 0 22 hPsi_associated_SNPs_27097 0 0 1 0 0 unknown 0.438720828445457 0.4387178677461 0 0 hPsi_site_20821 iPseU_CNN:0;iRNA_PseU:0 20822 chr11 82909634 82909634 1 + C A UCEC 82909633 + 82909613 82909653 41 AGCATTAATGAACTTGATGTTCTCCATAAGTTTACCCCTTT AGCATTAATGAACTTGATGTTATCCATAAGTTTACCCCTTT < 41bp 0.530000327458165 0.859574126644291 0.33842343 0.73069596 prediction 0.659147598372251 Functional Gain - ANKRD42 ENSG00000137494 CDS Human protein_coding chr11:82909633 chr11:82909634 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_27098 0 0 0 0 1 nucleus 0.438725594511442 0.43863121730052 0.46139192 0 hPsi_site_20822 iPseU_CNN:0.46139192;iRNA_PseU:0 20823 chr7 100609620 100609620 1 + G A BLCA 100609619 + 100609599 100609639 41 GAGGGCGCTGGTCGGGGGCCTGACGGCCGGCGCCGCGCTGC GAGGGCGCTGGTCGGGGGCCTAACGGCCGGCGCCGCGCTGC < 41bp 0.548343301983202 0.877913519608129 0.32399783 0.5151242 prediction 0.659140435249854 Functional Gain - MUC3A ENSG00000169894 CDS Human protein_coding chr7:100609619 chr7:100609620 synonymous SNV . 0 22 hPsi_associated_SNPs_27099 0 0 0 0 2 exosome 0.438228202919864 0.438718595575444 0.0302484000000001 0 hPsi_site_20823 iPseU_CNN:0.0302484000000001;iRNA_PseU:0 20824 chr3 17053356 17053356 1 + G A SKCM 17053355 + 17053335 17053375 41 GATGATGACTACATTGGGGATGAATTCATCGGCCAGTACAC GATGATGACTACATTGGGGATAAATTCATCGGCCAGTACAC < 41bp 0.55455400666682 0.884120484263876 0.7092103 0.8620934 prediction 0.659132955194112 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17053355 chr3:17053356 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_27100 0 0 1 0 0 nucleus 0.437979413444028 0.438678597102513 0.3057662 0 hPsi_site_20824 iPseU_CNN:0.3057662;iRNA_PseU:0 20825 chr11 126126707 126126707 1 + C A LIHC 126126706 + 126126686 126126726 41 TGCCGATCTTCCAGAATATTTCAAGCGACTGACATGTGAGA TGCCGATCTTCCAGAATATTTAAAGCGACTGACATGTGAGA < 41bp 0.474438223002482 0.829566374680107 0.31177902 0.427987 prediction 0.659132749360214 Functional Gain - FAM118B ENSG00000197798 CDS Human protein_coding chr11:126126706 chr11:126126707 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_27101 0 0 1 0 1 Ribosome 0.438717908996295 0.438718581204808 0 0 hPsi_site_20825 iPseU_CNN:0;iRNA_PseU:0 20826 chr11 94800429 94800429 1 + G A BLCA 94800428 + 94800408 94800448 41 CCCTCCCGACGTGGACGGCATGATCACCCTCAAGGTGGACA CCCTCCCGACGTGGACGGCATAATCACCCTCAAGGTGGACA < 41bp 0.490502658301277 0.829551565917035 0.30352682 0.66607726 prediction 0.659103131834069 Functional Gain - SRSF8 ENSG00000271885 CDS Human other chr11:94800428 chr11:94800429 unknown 0.923 1 22 hPsi_associated_SNPs_27102 0 0 1 0 0 Cytosol 0.438718635163834 0.438720144521005 0.33215452 0 hPsi_site_20826 iPseU_CNN:0.33215452;iRNA_PseU:0 20827 chrX 30254899 30254899 1 + G A CESC 30254898 + 30254878 30254918 41 CCATGCTGAAACCAGCAAGATGAAGGTCCTGGAGTTTTGGG CCATGCTGAAACCAGCAAGATAAAGGTCCTGGAGTTTTGGG < 41bp 0.424792342329788 0.829541066578378 0.2934577 0.44164658 prediction 0.659082133156757 Functional Gain - MAGEB3 ENSG00000198798 CDS Human protein_coding chrX:30254898 chrX:30254899 nonsynonymous SNV 0.646 1 22 hPsi_associated_SNPs_27103 0 0 0 0 0 unknown 0.439915431513685 0.438720247966393 0 0 hPsi_site_20827 iPseU_CNN:0;iRNA_PseU:0 20828 chr4 1389203 1389203 1 + G A STAD 1389202 + 1389182 1389222 41 GCCCATGTGGAGTGCCCGCCTGCTCACACGTGCCGACGTGG GCCCATGTGGAGTGCCCGCCTACTCACACGTGCCGACGTGG < 41bp 0.46357835311853 0.829539341195696 0.19843668 0.3231815 prediction 0.659078682391392 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389202 chr4:1389203 nonsynonymous SNV 0.039 0 22 hPsi_associated_SNPs_27104 0 0 0 0 0 chromatin 0.438957436724468 0.439000783376715 0 0 hPsi_site_20828 iPseU_CNN:0;iRNA_PseU:0 20829 chr8 11839853 11839853 1 + G A COAD 11839852 + 11839832 11839872 41 GGCCACAAGGAGCGTCCTCTTGGCCCTCGTGGTCCTTAACT GGCCACAAGGAGCGTCCTCTTAGCCCTCGTGGTCCTTAACT < 41bp 0.444757312370649 0.829536988253413 0.16182193 0.4281531 prediction 0.659073976506827 Functional Gain - DEFB135 ENSG00000205883 CDS Human protein_coding chr8:11839852 chr8:11839853 synonymous SNV . 0 22 hPsi_associated_SNPs_27105 0 0 0 0 1 unknown 0.438718592995084 0.438718589512596 0 0 hPsi_site_20829 iPseU_CNN:0;iRNA_PseU:0 20830 chr6 35392357 35392357 1 + G T SARC 35392356 + 35392336 35392376 41 GCACGAGGCCATCTTCGCCATGCTGGCCTCTATCGTCAACA GCACGAGGCCATCTTCGCCATTCTGGCCTCTATCGTCAACA < 41bp 0.497812745416644 0.829533458987318 0.2607802 0.6204387 prediction 0.659066917974635 Functional Gain - PPARD ENSG00000112033 CDS Human protein_coding chr6:35392356 chr6:35392357 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27106 0 0 0 0 0 Cytosol 0.438844625457443 0.43871882148674 0.2408774 0 hPsi_site_20830 iPseU_CNN:0.2408774;iRNA_PseU:0 20831 chr14 74424864 74424864 1 + C A UCEC 74424863 + 74424843 74424883 41 TCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCAT TCCCCAGACCGAGTGACGGTTATCTACAGGAGCAAAGCCAT < 41bp 0.534590640274043 0.8641199098743 0.32409364 0.5388166 prediction 0.659058539200513 Functional Gain - COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424863 chr14:74424864 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_27107 0 0 1 0 1 Ribosome 0.438731220247947 0.438721056647405 0.0776332 0 hPsi_site_20831 iPseU_CNN:0.0776332;iRNA_PseU:0 20832 chr18 31323582 31323582 1 + C A COAD 31323581 + 31323561 31323601 41 AAGAACATCCCTTTGTGAGTTCTGTTGATAAATCCTCTGTC AAGAACATCCCTTTGTGAGTTATGTTGATAAATCCTCTGTC < 41bp 0.521482803376187 0.851007694590732 0.53869015 0.65436125 prediction 0.659049782429091 Functional Gain - ASXL3 ENSG00000141431 CDS Human protein_coding chr18:31323581 chr18:31323582 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27108 0 0 1 0 0 exosome 0.438401628700557 0.438717041231914 0.2313422 0 hPsi_site_20832 iPseU_CNN:0.2313422;iRNA_PseU:0 20833 chr21 15596824 15596824 1 + C A COAD 15596823 + 15596803 15596843 41 ATTTTCCAATTAATAATACTTCTTTACCTCAAGAATATTTT ATTTTCCAATTAATAATACTTATTTACCTCAAGAATATTTT < 41bp 0.50259955396201 0.832119118765227 0.26587906 0.533322 prediction 0.659039129606433 Functional Gain - RBM11 ENSG00000185272 CDS Human protein_coding chr21:15596823 chr21:15596824 nonsynonymous SNV 0.703 0 22 hPsi_associated_SNPs_27109 0 0 0 0 2 exosome 0.438718017020789 0.438835198547186 0.0666439999999999 0 hPsi_site_20833 iPseU_CNN:0.0666439999999999;iRNA_PseU:0 20834 chr11 66191399 66191399 1 + C A rs144417328 66191398 + 66191378 66191418 41 TCCGACCATGCTGCCCTCATTCCCTGAAAACATTCTTTCCC TCCGACCATGCTGCCCTCATTACCTGAAAACATTCTTTCCC < 41bp 0.462314234564461 0.829514338687654 0.21334776 0.364707 prediction 0.659028677375308 Functional Gain - NPAS4 ENSG00000174576 CDS Human protein_coding chr11:66191398 chr11:66191399 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27110 0 0 0 0 1 unknown 0.437628219845006 0.438944365486051 0 0 hPsi_site_20834 iPseU_CNN:0;iRNA_PseU:0 20835 chr20 2842542 2842542 1 + C A BLCA 2842541 + 2842521 2842561 41 CACGAGTTCCTGCATGAGGTTCCAGGTGAGGCCTTCACAAG CACGAGTTCCTGCATGAGGTTACAGGTGAGGCCTTCACAAG < 41bp 0.467489239582133 0.829509173371825 0.34372598 0.7380847 prediction 0.65901834674365 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2842541 chr20:2842542 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27111 0 0 1 1 2 chromatin 0.438718521768586 0.438694349452106 0.4761694 0 hPsi_site_20835 iPseU_CNN:0.4761694;iRNA_PseU:0 20836 chr5 140482568 140482568 1 + G A UCEC 140482567 + 140482547 140482587 41 CCCAACTTCGTTGCTCAGGGTGCAGAGAGGGTTAGCGAGGC CCCAACTTCGTTGCTCAGGGTACAGAGAGGGTTAGCGAGGC < 41bp 0.4445990932674 0.829493144992457 0.23894629 0.58663976 prediction 0.658986289984913 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140482567 chr5:140482568 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_27112 0 0 0 0 0 exosome 0.438717672711205 0.438718331333032 0.17327952 0 hPsi_site_20836 iPseU_CNN:0.17327952;iRNA_PseU:0 20837 chr11 1689033 1689033 1 + G A rs559216128 1689032 + 1689012 1689052 41 TGGTGGTGCAGCCCAGAAGGTGTGAATCAGTTTACACTGTT TGGTGGTGCAGCCCAGAAGGTATGAATCAGTTTACACTGTT < 41bp 0.476413061351493 0.829490383848974 0.26137716 0.33310634 prediction 0.658980767697948 Functional Gain - FAM99A ENSG00000205866;ENSG00000256528 ncRNA_exonic Human other chr11:1689032 chr11:1689033 . . 0 22 hPsi_associated_SNPs_27113 0 0 0 0 0 unknown 0.438692429261527 0.438660335656763 0 0 hPsi_site_20837 iPseU_CNN:0;iRNA_PseU:0 20838 chr14 42356622 42356622 1 + C A UCEC 42356621 + 42356601 42356641 41 ATGACTTAGAGACCTGTGCTTCTCCTCCACTTTTAACTGGC ATGACTTAGAGACCTGTGCTTATCCTCCACTTTTAACTGGC < 41bp 0.526395831064553 0.855885050825637 0.23395711 0.3281132 prediction 0.658978439522169 Functional Gain - LRFN5 ENSG00000165379 CDS Human protein_coding chr14:42356621 chr14:42356622 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27114 0 0 0 0 0 Nucleus 0.438718612296497 0.438718479081453 0 0 hPsi_site_20838 iPseU_CNN:0;iRNA_PseU:0 20839 chr2 228197263 228197263 1 + C A UCEC 228197262 + 228197242 228197282 41 AGTGAAAGACCACTAGATTTTCTGGATTTAGAAAGACCTCC AGTGAAAGACCACTAGATTTTATGGATTTAGAAAGACCTCC < 41bp 0.522423690507208 0.851909586705805 0.28569603 0.36353678 prediction 0.658971792397194 Functional Gain - MFF ENSG00000168958 CDS Human protein_coding chr2:228197262 chr2:228197263 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_27115 0 0 1 0 1 Cytosol 0.438711959481024 0.438719616066779 0 0 hPsi_site_20839 iPseU_CNN:0;iRNA_PseU:0 20840 chr5 5200305 5200305 1 + G A LUAD 5200304 + 5200284 5200324 41 AAAGTCCGAGGGCAACATCATGTCCCCTACATTGGCAGGAC AAAGTCCGAGGGCAACATCATATCCCCTACATTGGCAGGAC < 41bp 0.401755790407147 0.829479424435601 0.26022688 0.42151546 prediction 0.658958848871202 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5200304 chr5:5200305 nonsynonymous SNV 0.985 5 22 hPsi_associated_SNPs_27116 0 0 0 0 2 exosome 0.438717816446544 0.438712679027143 0 0 hPsi_site_20840 iPseU_CNN:0;iRNA_PseU:0 20841 chr7 99818253 99818253 1 + G A SKCM 99818252 + 99818232 99818272 41 GTCTCAGGAGTCCTCCTCTTTGGCTGTGTCTACCTCCTTCA GTCTCAGGAGTCCTCCTCTTTAGCTGTGTCTACCTCCTTCA < 41bp 0.574615342099611 0.904088382216605 0.28763184 0.6774782 prediction 0.658946080233987 Functional Gain - PVRIG ENSG00000213413 CDS Human protein_coding chr7:99818252 chr7:99818253 nonsynonymous SNV 0.924 3 22 hPsi_associated_SNPs_27117 0 0 0 0 2 exosome 0.438718592913285 0.438718593049406 0.3549564 0 hPsi_site_20841 iPseU_CNN:0.3549564;iRNA_PseU:0 20842 chr8 42585836 42585836 1 + C A BLCA 42585835 + 42585815 42585855 41 CTGTGGCTTCCTGACATAGTTCTCTTTGAAAAGTAAGTATC CTGTGGCTTCCTGACATAGTTATCTTTGAAAAGTAAGTATC < 41bp 0.516831956093597 0.846304815641511 0.20485362 0.28809792 prediction 0.658945719095828 Functional Gain - CHRNB3 ENSG00000147432 CDS Human protein_coding chr8:42585835 chr8:42585836 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27118 0 0 0 0 2 exosome 0.438720177481629 0.438718590069348 0 0 hPsi_site_20842 iPseU_CNN:0;iRNA_PseU:0 20843 chr14 102808330 102808330 1 + C A rs12590618 102808329 + 102808309 102808349 41 ACTGGAGAGCGTGGTTGCTGTCGGCGAAGCCATGGCTTTTG ACTGGAGAGCGTGGTTGCTGTAGGCGAAGCCATGGCTTTTG < 41bp 0.464141567922317 0.829469259239725 0.23918235 0.67744535 prediction 0.65893851847945 Functional Gain - ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102808329 chr14:102808330 synonymous SNV . 0 22 hPsi_associated_SNPs_27119 0 0 0 0 0 chromatin 0.438718626016337 0.438718500596729 0.3548907 0 hPsi_site_20843 iPseU_CNN:0.3548907;iRNA_PseU:0 20844 chr2 113765450 113765450 1 + G A SKCM 113765449 + 113765429 113765469 41 GTACAACCAACCCGAGCCTGTGAAGTCCTTTCTCTTCTACC GTACAACCAACCCGAGCCTGTAAAGTCCTTTCTCTTCTACC < 41bp 0.567665925622176 0.897131460001125 0.36175838 0.7882396 prediction 0.6589310687579 Functional Gain - IL36A ENSG00000136694 CDS Human protein_coding chr2:113765449 chr2:113765450 synonymous SNV . 0 22 hPsi_associated_SNPs_27120 0 0 0 0 1 exosome 0.438718592995102 0.438718592995013 0.5764792 0 hPsi_site_20844 iPseU_CNN:0.5764792;iRNA_PseU:0 20845 chr1 246810906 246810906 1 + C A UCEC 246810905 + 246810885 246810925 41 GTTTGCCACTTCGGGATGCTTCTGAGGCGTTGCCCACAGAC GTTTGCCACTTCGGGATGCTTATGAGGCGTTGCCCACAGAC < 41bp 0.533308475393757 0.862773420516783 0.24232376 0.33235627 prediction 0.658929890246051 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810905 chr1:246810906 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_27121 0 0 1 0 0 Ribosome 0.438718710747701 0.438718766673338 0 0 hPsi_site_20845 iPseU_CNN:0;iRNA_PseU:0 20846 chr11 60156897 60156897 1 + C A STAD 60156896 + 60156876 60156916 41 TGACCTCAAATGCAGTGAGTTCTGTTACTGCAGGAGCAGGC TGACCTCAAATGCAGTGAGTTATGTTACTGCAGGAGCAGGC < 41bp 0.484743220264785 0.829462101190074 0.2620826 0.3800448 prediction 0.658924202380148 Functional Gain - MS4A7 ENSG00000166927 CDS Human protein_coding chr11:60156896 chr11:60156897 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_27122 0 0 0 0 1 Cytosol 0.436631418676352 0.43752172994123 0 0 hPsi_site_20846 iPseU_CNN:0;iRNA_PseU:0 20847 chr16 29821526 29821526 1 + C T BRCA 29821527 - 29821507 29821547 41 AGGGTTGGGAGGGAAGTGGCTGAGAGCTCACAGGCACCCCC AGGGTTGGGAGGGAAGTGGCTAAGAGCTCACAGGCACCCCC < 41bp 0.536405409601285 0.865864092440455 0.37953708 0.8885736 prediction 0.65891736567834 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29821527 chr16:29821526 stopgain 1.000 1 22 hPsi_associated_SNPs_27123 0 0 0 0 0 Cytosol 0.438707916105649 0.438718594345866 0.7771472 0 hPsi_site_20847 iPseU_CNN:0.7771472;iRNA_PseU:0 20848 chrX 50053116 50053116 1 + G A LGG 50053115 + 50053095 50053135 41 GAAAGAGAAGCATACCACCTTGCAGGAAGTGTCCCTCTCAA GAAAGAGAAGCATACCACCTTACAGGAAGTGTCCCTCTCAA < 41bp 0.432879841790368 0.82945701720709 0.30782026 0.66741973 prediction 0.658914034414179 Functional Gain - CCNB3 ENSG00000147082 CDS Human protein_coding chrX:50053115 chrX:50053116 synonymous SNV . 0 22 hPsi_associated_SNPs_27124 0 0 0 0 0 exosome 0.438718570666481 0.4387184868206 0.33483946 0 hPsi_site_20848 iPseU_CNN:0.33483946;iRNA_PseU:0 20849 chr1 6640144 6640144 1 + G A rs528408891 6640143 + 6640123 6640163 41 GGCACTAGGTTCGTGGGCTGTGGAGGCGACGGAGCAGGGGG GGCACTAGGTTCGTGGGCTGTAGAGGCGACGGAGCAGGGGG < 41bp 0.461757592234399 0.829454718370487 0.27471 0.6839707 prediction 0.658909436740975 Functional Gain - ZBTB48 ENSG00000204859 UTR5 Human protein_coding chr1:6640143 chr1:6640144 . . 0 22 hPsi_associated_SNPs_27125 0 0 1 0 1 Nucleus 0.43893177437636 0.438716309494312 0.3679414 0 hPsi_site_20849 iPseU_CNN:0.3679414;iRNA_PseU:0 20850 chr3 148614635 148614635 1 + G A rs183788880 148614634 + 148614614 148614654 41 TTTAAGTCCCATGTTACTGCTGTTTGCTTTTACTTACTTTC TTTAAGTCCCATGTTACTGCTATTTGCTTTTACTTACTTTC < 41bp 0.540619720419582 0.870073883904869 0.13563439 0.17822984 prediction 0.658908326970575 Functional Gain - CPA3 ENSG00000240521 ncRNA_intronic Human antisense chr3:148614634 chr3:148614635 . . 0 22 hPsi_associated_SNPs_27126 0 0 0 0 0 Endoplasmic reticulum 0.438719073623987 0.438718982804858 0 0 hPsi_site_20850 iPseU_CNN:0;iRNA_PseU:0 20851 chr2 190327287 190327287 1 + C A LGG 190327286 + 190327266 190327306 41 ACAGAGAAGAATAAGGAGTTTCTCCCGCGTTTAGGAGCTAC ACAGAGAAGAATAAGGAGTTTATCCCGCGTTTAGGAGCTAC < 41bp 0.477702969274235 0.82945414283599 0.47441095 0.61071897 prediction 0.65890828567198 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190327286 chr2:190327287 nonsynonymous SNV 0.949 4 22 hPsi_associated_SNPs_27127 0 0 1 0 2 Nucleus 0.438718592995103 0.438718592994997 0.22143794 0 hPsi_site_20851 iPseU_CNN:0.22143794;iRNA_PseU:0 20852 chr16 56624758 56624758 1 + G A UCEC 56624757 + 56624737 56624777 41 CCATTTTATCTGCAGGCTGCTGCTCCTGCTGCCCTGCGGAG CCATTTTATCTGCAGGCTGCTACTCCTGCTGCCCTGCGGAG < 41bp 0.427712785255228 0.829453338040012 0.18872899 0.5077205 prediction 0.658906676080024 Functional Gain - MT3 ENSG00000087250 CDS Human protein_coding chr16:56624757 chr16:56624758 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27128 0 0 0 1 1 exosome 0.438718673536583 0.43872964806405 0.015441 0 hPsi_site_20852 iPseU_CNN:0.015441;iRNA_PseU:0 20853 chr9 119461093 119461093 1 + C A UCEC 119461092 + 119461072 119461112 41 AATATCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAA AATATCCAGCAGTGCCTCTTTATCAAGAAGATGGGGGCCAA < 41bp 0.529928183651635 0.85938119559632 0.43338734 0.39525086 prediction 0.658906023889369 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461092 chr9:119461093 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27129 0 0 0 0 0 chromatin 0.438718593005472 0.438718690310245 0 0 hPsi_site_20853 iPseU_CNN:0;iRNA_PseU:0 20854 chr1 205240363 205240363 1 + G A OV 205240362 + 205240342 205240382 41 AAGGTGGCCTACCAGTCCTATGAGAGGGCACGGGACATCCA AAGGTGGCCTACCAGTCCTATAAGAGGGCACGGGACATCCA < 41bp 0.412086365940051 0.829448660441476 0.2886719 0.5917565 prediction 0.658897320882952 Functional Gain - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205240362 chr1:205240363 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27130 0 0 0 0 1 chromatin 0.438835681974662 0.442936394974679 0.183513 0 hPsi_site_20854 iPseU_CNN:0.183513;iRNA_PseU:0 20855 chr15 31196952 31196952 1 + C A UCEC 31196951 + 31196931 31196971 41 ATAAGAAAAAAGCATCTAATTCTATTATTTCGTGTTTTAAC ATAAGAAAAAAGCATCTAATTATATTATTTCGTGTTTTAAC < 41bp 0.494589243246359 0.829447786670896 0.2391192 0.29528612 prediction 0.658895573341792 Functional Gain - FAN1 ENSG00000198690 CDS Human protein_coding chr15:31196951 chr15:31196952 nonsynonymous SNV 0.177 4 22 hPsi_associated_SNPs_27131 0 0 0 0 0 Cytosol 0.438337671001877 0.438689540706828 0 0 hPsi_site_20855 iPseU_CNN:0;iRNA_PseU:0 20856 chr12 12940199 12940199 1 + G A UCEC 12940198 + 12940178 12940218 41 CTCCCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCACCT CTCCCGGGAGCTGCGGAGGGTACAGGAGATCGCGGCCACCT < 41bp 0.4253670139335 0.829442432333837 0.4329068 0.8819674 prediction 0.658884864667674 Functional Gain - APOLD1 ENSG00000178878 CDS Human protein_coding chr12:12940198 chr12:12940199 synonymous SNV . 0 22 hPsi_associated_SNPs_27132 0 0 1 0 0 Cytosol 0.438729026057528 0.438718297383682 0.7639348 0 hPsi_site_20856 iPseU_CNN:0.7639348;iRNA_PseU:0 20857 chr1 6511923 6511923 1 + G A UCEC 6511922 + 6511902 6511942 41 CCGCTGCCTTCTGTGTCACCTGCACTGTCACCAGTCCGGAG CCGCTGCCTTCTGTGTCACCTACACTGTCACCAGTCCGGAG < 41bp 0.437598374709772 0.829439195445483 0.29392153 0.41848096 prediction 0.658878390890966 Functional Gain - ESPN ENSG00000187017 CDS Human protein_coding chr1:6511922 chr1:6511923 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_27133 0 0 1 0 1 Ribosome 0.438809399420428 0.438728309307002 0 0 hPsi_site_20857 iPseU_CNN:0;iRNA_PseU:0 20858 chr15 59911556 59911556 1 + C A rs144836310 59911555 + 59911535 59911575 41 GCAGGGTCATGAGGGAGACATCGATAAGGGTGCTCCTTATG GCAGGGTCATGAGGGAGACATAGATAAGGGTGCTCCTTATG < 41bp 0.465783901025214 0.829439177347954 0.33258855 0.34231126 prediction 0.658878354695907 Functional Gain - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911555 chr15:59911556 synonymous SNV . 0 22 hPsi_associated_SNPs_27134 0 0 0 0 0 exosome 0.438786372215031 0.438435637028864 0 0 hPsi_site_20858 iPseU_CNN:0;iRNA_PseU:0 20859 chrX 47775487 47775487 1 + C A STAD 47775486 + 47775466 47775506 41 ACTGTGGGAAATCTTTCCCTTCTAAGTCACAACTCCAGATG ACTGTGGGAAATCTTTCCCTTATAAGTCACAACTCCAGATG < 41bp 0.480111422165435 0.829435620775234 0.5187941 0.71544605 prediction 0.658871241550467 Functional Gain - ZNF81 ENSG00000197779 CDS Human protein_coding chrX:47775486 chrX:47775487 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27135 0 0 0 0 0 cytosol 0.43967278698012 0.438718080934254 0.3933039 0 hPsi_site_20859 iPseU_CNN:0.3933039;iRNA_PseU:0 20860 chr17 35299535 35299535 1 + G A BLCA 35299534 + 35299514 35299554 41 GCGCTCCAAGGAGCGGAGGATGAAGCAGCTGAGCGCCCTGG GCGCTCCAAGGAGCGGAGGATAAAGCAGCTGAGCGCCCTGG < 41bp 0.413647716260846 0.829434444001974 0.3237253 0.47984153 prediction 0.658868888003947 Functional Gain - LHX1 ENSG00000132130 CDS Human other chr17:35299534 chr17:35299535 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27136 0 0 0 0 1 exosome 0.438712404281172 0.438718592930344 0 0 hPsi_site_20860 iPseU_CNN:0;iRNA_PseU:0 20861 chr5 137777100 137777100 1 + C A UCEC 137777099 + 137777079 137777119 41 ATGGATGATGTACTGGATCGTCTTTGCCTTCTTCACCACGG ATGGATGATGTACTGGATCGTATTTGCCTTCTTCACCACGG < 41bp 0.528829129070782 0.858258924903021 0.68490076 0.82563996 prediction 0.658859591664479 Functional Gain - REEP2 ENSG00000132563 CDS Human protein_coding chr5:137777099 chr5:137777100 synonymous SNV . 0 22 hPsi_associated_SNPs_27137 0 0 1 0 2 exosome 0.43871847551708 0.438718582292821 0.2814784 0 hPsi_site_20861 iPseU_CNN:0.2814784;iRNA_PseU:0 20862 chr22 39112039 39112039 1 + G T SARC 39112038 + 39112018 39112058 41 GCAAGAAGCTGGGGGCCGCGTGCGTGATTACCTGGTCCGGA GCAAGAAGCTGGGGGCCGCGTTCGTGATTACCTGGTCCGGA < 41bp 0.501160680689691 0.830590064687604 0.40194476 0.7167457 prediction 0.658858767995826 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39112038 chr22:39112039 synonymous SNV . 0 22 hPsi_associated_SNPs_27138 0 0 1 0 1 Ribosome 0.438720957835336 0.438794546056348 0.4334914 0 hPsi_site_20862 iPseU_CNN:0.4334914;iRNA_PseU:0 20863 chr1 110465931 110465931 1 + G A LUAD 110465930 + 110465910 110465950 41 TGGGAGGACTCTGAGGGAACTGAGGGCAGCTCCCTCTTGCC TGGGAGGACTCTGAGGGAACTAAGGGCAGCTCCCTCTTGCC < 41bp 0.413742818017427 0.829425329759829 0.19271672 0.4158353 prediction 0.658850659519658 Functional Gain - CSF1 ENSG00000184371 CDS Human protein_coding chr1:110465930 chr1:110465931 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_27139 0 0 1 0 0 chromatin 0.438712813213387 0.438718592972038 0 0 hPsi_site_20863 iPseU_CNN:0;iRNA_PseU:0 20864 chr5 131822349 131822349 1 + G T UCEC 131822350 - 131822330 131822370 41 GGATTCCAGCCCTGATACCTTCTCTGATGGACTCAGCAGCT GGATTCCAGCCCTGATACCTTATCTGATGGACTCAGCAGCT < 41bp 0.548376274877777 0.877795041288431 0.31617913 0.3446678 prediction 0.65883753282131 Functional Gain - IRF1 ENSG00000125347 CDS Human protein_coding chr5:131822350 chr5:131822349 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27140 0 0 1 0 1 Cytosol 0.438719151857023 0.43871417978533 0 0 hPsi_site_20864 iPseU_CNN:0;iRNA_PseU:0 20865 chr17 40705100 40705100 1 + C T rs597255 40705101 - 40705081 40705121 41 GGAAGATCTGACTTCCCTTCTGGCCTCCAAGGGCTCCTCCC GGAAGATCTGACTTCCCTTCTAGCCTCCAAGGGCTCCTCCC < 41bp 0.543191921405473 0.872608760553334 0.37294653 0.7176 prediction 0.658833678295723 Functional Gain - LOC108783654 ENSG00000266962 ncRNA_exonic Human antisense chr17:40705101 chr17:40705100 . . 0 22 hPsi_associated_SNPs_27141 0 0 1 0 0 unknown 0.438718592995065 0.438718598890187 0.4352 0 hPsi_site_20865 iPseU_CNN:0.4352;iRNA_PseU:0 20866 chr16 843016 843016 1 + C A rs183654445 843015 + 842995 843035 41 CCCAGGGGTGCTGGCCGCCCTCTGTGAGAAAACTGACAATG CCCAGGGGTGCTGGCCGCCCTATGTGAGAAAACTGACAATG < 41bp 0.461679274352685 0.829416467588487 0.29547554 0.6337756 prediction 0.658832935176975 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:843015 chr16:843016 synonymous SNV . 0 22 hPsi_associated_SNPs_27142 0 0 1 1 2 Nucleus 0.43871859094696 0.438718571253607 0.2675512 0 hPsi_site_20866 iPseU_CNN:0.2675512;iRNA_PseU:0 20867 chr10 75556703 75556703 1 + G A UCEC 75556702 + 75556682 75556722 41 ACCTCAGGCTCTGCAGGGCCTGCTCAACCAGGGAGTGTGGC ACCTCAGGCTCTGCAGGGCCTACTCAACCAGGGAGTGTGGC < 41bp 0.419837474286939 0.829414290252324 0.17076054 0.29950127 prediction 0.658828580504648 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75556702 chr10:75556703 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27143 0 0 1 0 1 Cytosol 0.438749015182547 0.438718739608124 0 0 hPsi_site_20867 iPseU_CNN:0;iRNA_PseU:0 20868 chr6 112671298 112671298 1 + C A LUAD 112671297 + 112671277 112671317 41 CACCACGATCTGACAAAAGATCCCAGGCTGGCCTGTGTCCT CACCACGATCTGACAAAAGATACCAGGCTGGCCTGTGTCCT < 41bp 0.47242554968248 0.829411356627684 0.30178696 0.7001157 prediction 0.658822713255369 Functional Gain - RFPL4B ENSG00000251258 CDS Human protein_coding chr6:112671297 chr6:112671298 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27144 0 0 0 0 0 unknown 0.438718593045845 0.438713808605272 0.4002314 0 hPsi_site_20868 iPseU_CNN:0.4002314;iRNA_PseU:0 20869 chr2 103324856 103324856 1 + G A SKCM 103324855 + 103324835 103324875 41 GAGAGGGAAGACAGTTTGACTGAAGGCATCCCGCCCAAGCC GAGAGGGAAGACAGTTTGACTAAAGGCATCCCGCCCAAGCC < 41bp 0.453241818671768 0.829404673903903 0.32505652 0.70598316 prediction 0.658809347807806 Functional Gain - SLC9A2 ENSG00000115616 CDS Human protein_coding chr2:103324855 chr2:103324856 nonsynonymous SNV 0.967 0 22 hPsi_associated_SNPs_27145 0 0 0 0 0 Ribosome 0.438718322846968 0.438718602513611 0.41196632 0 hPsi_site_20869 iPseU_CNN:0.41196632;iRNA_PseU:0 20870 chr10 18957568 18957568 1 + C A OV 18957567 + 18957547 18957587 41 GATATTGGTGGTCAGGAGTCTCTGCGATCATCCTGGAACAC GATATTGGTGGTCAGGAGTCTATGCGATCATCCTGGAACAC < 41bp 0.527055855235107 0.856458210573723 0.21717423 0.5836065 prediction 0.658804710677231 Functional Gain - ARL5B ENSG00000165997 CDS Human protein_coding chr10:18957567 chr10:18957568 nonsynonymous SNV 0.969 4 22 hPsi_associated_SNPs_27146 0 0 1 0 1 Endoplasmic reticulum 0.439218822633403 0.438778016603759 0.167213 0 hPsi_site_20870 iPseU_CNN:0.167213;iRNA_PseU:0 20871 chr19 13869691 13869691 1 + G T BLCA 13869690 + 13869670 13869710 41 GCTCCCTCCCAGGTTCCGGATGAAATGCCACCTCTGTGTCA GCTCCCTCCCAGGTTCCGGATTAAATGCCACCTCTGTGTCA < 41bp 0.504840888148846 0.834242577151187 0.3121662 0.70438904 prediction 0.658803378004682 Functional Gain - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869690 chr19:13869691 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27147 0 0 1 0 1 Cytosol 0.438695856942899 0.438719779614693 0.40877808 0 hPsi_site_20871 iPseU_CNN:0.40877808;iRNA_PseU:0 20872 chr22 37266489 37266489 1 + G T STAD 37266488 + 37266468 37266508 41 CCTGCCGGTCTGGGTGCTGATGGATGAGGACGTCCGGATCT CCTGCCGGTCTGGGTGCTGATTGATGAGGACGTCCGGATCT < 41bp 0.49428433503697 0.829399334261012 0.21844056 0.25401115 prediction 0.658798668522025 Functional Gain - NCF4 ENSG00000100365 CDS Human protein_coding chr22:37266488 chr22:37266489 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_27148 0 0 0 0 1 exosome 0.438718573556427 0.438716845516642 0 0 hPsi_site_20872 iPseU_CNN:0;iRNA_PseU:0 20873 chr2 170489726 170489726 1 + C A HNSC 170489725 + 170489705 170489745 41 GACGACTTTTAGTTACTAGATCTGGCAGGAAAATTAAAGGA GACGACTTTTAGTTACTAGATATGGCAGGAAAATTAAAGGA < 41bp 0.53415726862937 0.863550150373436 0.3197481 0.43062022 prediction 0.658785763488132 Functional Gain - PPIG ENSG00000138398 CDS Human protein_coding chr2:170489725 chr2:170489726 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27149 0 0 1 0 1 Cytosol 0.438718592995134 0.438718589021403 0 0 hPsi_site_20873 iPseU_CNN:0;iRNA_PseU:0 20874 chr1 99771306 99771306 1 + C A LUAD 99771305 + 99771285 99771325 41 GTTTCAGCACAGAGACGCCCTCAGGTCTCTGACAGACCTCA GTTTCAGCACAGAGACGCCCTAAGGTCTCTGACAGACCTCA < 41bp 0.480630662968072 0.829389644047104 0.3041622 0.32041603 prediction 0.658779288094207 Functional Gain - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99771305 chr1:99771306 synonymous SNV . 0 22 hPsi_associated_SNPs_27150 0 0 0 0 1 exosome 0.439017709166023 0.438719304447633 0 0 hPsi_site_20874 iPseU_CNN:0;iRNA_PseU:0 20875 chr5 78426781 78426781 1 + C A LUAD 78426780 + 78426760 78426800 41 AGGAAGGAATACTGGGAGAATCTTCGGATAGCCTCAGGCCG AGGAAGGAATACTGGGAGAATATTCGGATAGCCTCAGGCCG < 41bp 0.482908270372689 0.829388045566377 0.3630674 0.61222965 prediction 0.658776091132754 Functional Gain - BHMT ENSG00000145692 CDS Human protein_coding chr5:78426780 chr5:78426781 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_27151 0 0 0 0 1 exosome 0.438718578725994 0.438718618574553 0.2244593 0 hPsi_site_20875 iPseU_CNN:0.2244593;iRNA_PseU:0 20876 chr9 32634788 32634788 1 + G T UCEC 32634789 - 32634769 32634809 41 AAAGTGTTACGCTTCCTACATCTTTTTGGACCAGGGAAGAA AAAGTGTTACGCTTCCTACATATTTTTGGACCAGGGAAGAA < 41bp 0.486387763525508 0.829387915600423 0.24188775 0.26295167 prediction 0.658775831200845 Functional Gain - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634789 chr9:32634788 nonsynonymous SNV 0.930 4 22 hPsi_associated_SNPs_27152 0 0 0 0 0 exosome 0.43871858889233 0.438718594203048 0 0 hPsi_site_20876 iPseU_CNN:0;iRNA_PseU:0 20877 chr1 243480159 243480159 1 + G A UCEC 243480158 + 243480138 243480178 41 TGAACAGGTGAAACAAGTTTTGCAAATATCTGAGGAAGCCA TGAACAGGTGAAACAAGTTTTACAAATATCTGAGGAAGCCA < 41bp 0.428292805857075 0.829386817838766 0.635866 0.66080695 prediction 0.658773635677532 Functional Gain - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243480158 chr1:243480159 synonymous SNV . 0 22 hPsi_associated_SNPs_27153 0 0 1 0 0 chromatin 0.438717555606408 0.438705434871436 0.0498818999999999 0 hPsi_site_20877 iPseU_CNN:0.0498818999999999;iRNA_PseU:0 20878 chr19 48284406 48284406 1 + G A OV 48284405 + 48284385 48284425 41 GGCCACCGGGTTCTTTGAAGTGATGGTAGCCGGGAAGTTGA GGCCACCGGGTTCTTTGAAGTAATGGTAGCCGGGAAGTTGA < 41bp 0.409038409571554 0.829385179886122 0.16859046 0.28624687 prediction 0.658770359772244 Functional Gain - SELENOW ENSG00000178980 CDS Human protein_coding chr19:48284405 chr19:48284406 synonymous SNV . 0 22 hPsi_associated_SNPs_27154 0 0 1 0 2 Nucleus 0.43871896203989 0.438718592995105 0 0 hPsi_site_20878 iPseU_CNN:0;iRNA_PseU:0 20879 chr1 29185756 29185756 1 + G A SKCM 29185755 + 29185735 29185775 41 AGCTGATCAACATCTGTATCTGGGTCCTGGCCTCAGGCGTT AGCTGATCAACATCTGTATCTAGGTCCTGGCCTCAGGCGTT < 41bp 0.42481039426866 0.829382856323871 0.22176304 0.5426006 prediction 0.658765712647743 Functional Gain - OPRD1 ENSG00000116329 CDS Human protein_coding chr1:29185755 chr1:29185756 stopgain 1.000 1 22 hPsi_associated_SNPs_27155 0 0 0 0 1 nucleoplasm 0.438717894784337 0.438719346770193 0.0852012 0 hPsi_site_20879 iPseU_CNN:0.0852012;iRNA_PseU:0 20880 chrX 24229378 24229378 1 + C A LIHC 24229377 + 24229357 24229397 41 GCTTTAAACGGCACGTTATTTCCATTCACACGAAAGACTAT GCTTTAAACGGCACGTTATTTACATTCACACGAAAGACTAT < 41bp 0.485859321967204 0.829380889985559 0.22239062 0.3333791 prediction 0.658761779971118 Functional Gain - ZFX ENSG00000005889 CDS Human protein_coding chrX:24229377 chrX:24229378 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27156 0 0 1 0 0 Cytosol 0.439411041541344 0.432702593410265 0 0 hPsi_site_20880 iPseU_CNN:0;iRNA_PseU:0 20881 chr20 43541433 43541433 1 + C A UCEC 43541432 + 43541412 43541452 41 TCATCAAGAACCTGGAGGACTCCATTGACAACAAGGCTTTA TCATCAAGAACCTGGAGGACTACATTGACAACAAGGCTTTA < 41bp 0.512976368532949 0.842354659506625 0.16949281 0.22336751 prediction 0.658756581947351 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43541432 chr20:43541433 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_27157 0 0 1 0 1 chromatin 0.438716852275081 0.440062219290086 0 0 hPsi_site_20881 iPseU_CNN:0;iRNA_PseU:0 20882 chr8 145096185 145096185 1 + G A SKCM 145096184 + 145096164 145096204 41 GGGTGAGATTGCCTTCCAGCTGGACCGCAGGATCCTGTCCA GGGTGAGATTGCCTTCCAGCTAGACCGCAGGATCCTGTCCA < 41bp 0.567972677490296 0.897347255488421 0.25685602 0.4773286 prediction 0.65874915599625 Functional Gain - SPATC1 ENSG00000186583 CDS Human protein_coding chr8:145096184 chr8:145096185 synonymous SNV . 0 22 hPsi_associated_SNPs_27158 0 0 0 0 1 chromatin 0.438456594150578 0.438718993953573 0 0 hPsi_site_20882 iPseU_CNN:0;iRNA_PseU:0 20883 chr3 12475626 12475626 1 + C A LUAD 12475625 + 12475605 12475645 41 TCACCCGCTCCTGCAGGAGATCTACAAGGACTTGTACTAGC TCACCCGCTCCTGCAGGAGATATACAAGGACTTGTACTAGC < 41bp 0.486867891648768 0.829364778674222 0.46230322 0.33535337 prediction 0.658729557348444 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12475625 chr3:12475626 synonymous SNV . 0 22 hPsi_associated_SNPs_27159 0 0 1 0 0 Cytosol 0.442339427315827 0.439017302779058 0 0 hPsi_site_20883 iPseU_CNN:0;iRNA_PseU:0 20884 chr2 219254656 219254656 1 + G A COAD 219254655 + 219254635 219254675 41 GCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTGTC GCCAACATGTACTTCCTGATTAAGGCCACCATCGCCCTGTC < 41bp 0.423707312938708 0.829363562777619 0.35486162 0.7093108 prediction 0.658727125555238 Functional Gain - SLC11A1 ENSG00000018280 CDS Human protein_coding chr2:219254655 chr2:219254656 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_27160 0 0 0 0 2 Nucleus 0.438718310268909 0.438718590022874 0.4186216 0 hPsi_site_20884 iPseU_CNN:0.4186216;iRNA_PseU:0 20885 chr20 31688243 31688243 1 + C A UCEC 31688242 + 31688222 31688262 41 TTCCCTCCAGGACACAGAATTCTTGGCCTCATTTTCCACAG TTCCCTCCAGGACACAGAATTATTGGCCTCATTTTCCACAG < 41bp 0.477738805257049 0.829363299069382 0.34438574 0.3918369 prediction 0.658726598138764 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31688242 chr20:31688243 nonsynonymous SNV 0.166 0 22 hPsi_associated_SNPs_27161 0 0 0 0 2 exosome 0.438579061878845 0.438754434233095 0 0 hPsi_site_20885 iPseU_CNN:0;iRNA_PseU:0 20886 chr16 19126116 19126116 1 + G A rs200600682 19126115 + 19126095 19126135 41 CTACGAGCATGAGGTGCGCCTGTCTCCGCACGTGTTGGGCC CTACGAGCATGAGGTGCGCCTATCTCCGCACGTGTTGGGCC < 41bp 0.556738978424007 0.88609818043487 0.24841502 0.65347755 prediction 0.658718404021725 Functional Gain - ITPRIPL2 ENSG00000205730;ENSG00000261427 CDS Human other chr16:19126115 chr16:19126116 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27162 0 0 0 0 0 Ribosome 0.438683236232028 0.438714645754836 0.3069551 0 hPsi_site_20886 iPseU_CNN:0.3069551;iRNA_PseU:0 20887 chr7 45753394 45753394 1 + C A UCEC 45753393 + 45753373 45753413 41 GGCGAGATGTTGACATACTTTCTAGAAGGCAGGACTGATGG GGCGAGATGTTGACATACTTTATAGAAGGCAGGACTGATGG < 41bp 0.4840511546255 0.829357278641871 0.5623005 0.3347062 prediction 0.658714557283742 Functional Gain - ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45753393 chr7:45753394 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_27163 0 0 1 0 0 Nucleus 0.44050067764561 0.43794174457172 0 0 hPsi_site_20887 iPseU_CNN:0;iRNA_PseU:0 20888 chrX 48418448 48418448 1 + G A UCEC 48418447 + 48418427 48418467 41 TGCACACTTGAAGCTGTTGCTGCGACACGCTGACCCTGACT TGCACACTTGAAGCTGTTGCTACGACACGCTGACCCTGACT < 41bp 0.420903567951931 0.829355826255628 0.27070567 0.6021569 prediction 0.658711652511256 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48418447 chrX:48418448 synonymous SNV . 0 22 hPsi_associated_SNPs_27164 0 0 1 0 0 nucleolus 0.438721390585741 0.438708179037662 0.2043138 0 hPsi_site_20888 iPseU_CNN:0.2043138;iRNA_PseU:0 20889 chr9 32784238 32784238 1 + C A GBM 32784237 + 32784217 32784257 41 GGTGGTGGCCCTGGTCAGTGTCTTCCTCGTCTTTGGTTTCA GGTGGTGGCCCTGGTCAGTGTATTCCTCGTCTTTGGTTTCA < 41bp 0.52442277302718 0.853775331147451 0.6029084 0.8752962 prediction 0.658705116240541 Functional Gain - TMEM215 ENSG00000188133 CDS Human protein_coding chr9:32784237 chr9:32784238 synonymous SNV . 0 22 hPsi_associated_SNPs_27165 0 0 0 0 0 exosome 0.438718593147616 0.438718593045877 0.5447756 0 hPsi_site_20889 iPseU_CNN:0.5447756;iRNA_PseU:0 20890 chr19 45295700 45295700 1 + G A CESC 45295699 + 45295679 45295719 41 GAGCTCTGCAAGATCTGTGCTGAGAGCAACAAGGATGTGAA GAGCTCTGCAAGATCTGTGCTAAGAGCAACAAGGATGTGAA < 41bp 0.571999201131141 0.901337067618396 0.2569968 0.31242096 prediction 0.658675732974511 Functional Gain - CBLC ENSG00000142273 CDS Human protein_coding chr19:45295699 chr19:45295700 nonsynonymous SNV 0.716 5 22 hPsi_associated_SNPs_27166 0 0 0 0 2 Ribosome 0.438719429235853 0.438625682196693 0 0 hPsi_site_20890 iPseU_CNN:0;iRNA_PseU:0 Bipolar disorder (body mass index interaction) 20891 chr20 36407619 36407619 1 + G A HNSC 36407618 + 36407598 36407638 41 AGACACAATCCCAGCACGGCTGAGGAGCAGGAGATGATGGA AGACACAATCCCAGCACGGCTAAGGAGCAGGAGATGATGGA < 41bp 0.419108577198066 0.829335621155254 0.11276886 0.20317435 prediction 0.658671242310507 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36407618 chr20:36407619 nonsynonymous SNV 0.900 3 22 hPsi_associated_SNPs_27167 0 0 1 0 1 Cytosol 0.43871859040743 0.438718592871532 0 0 hPsi_site_20891 iPseU_CNN:0;iRNA_PseU:0 20892 chrX 78010830 78010830 1 + C A UCEC 78010829 + 78010809 78010849 41 CTATTAGGACTAGGAGGAATTCTGCCATTGTGTGTGCTGGT CTATTAGGACTAGGAGGAATTATGCCATTGTGTGTGCTGGT < 41bp 0.517652484302519 0.846984862550022 0.14346051 0.36004293 prediction 0.658664756495006 Functional Gain - LPAR4 ENSG00000147145 CDS Human protein_coding chrX:78010829 chrX:78010830 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27168 0 0 0 0 0 exosome 0.438733617956972 0.438721682140652 0 0 hPsi_site_20892 iPseU_CNN:0;iRNA_PseU:0 20893 chr15 55710665 55710665 1 + C A CESC 55710664 + 55710644 55710684 41 CTCCAAAGGAGCAAGTATTTTCAAGCCATATCAGAGCAACT CTCCAAAGGAGCAAGTATTTTAAAGCCATATCAGAGCAACT < 41bp 0.506167004157654 0.835494528674055 0.50451744 0.37673545 prediction 0.658655049032802 Functional Gain - C15orf65 ENSG00000261652 CDS Human protein_coding chr15:55710664 chr15:55710665 stopgain 0.344 0 22 hPsi_associated_SNPs_27169 0 0 0 0 0 exosome 0.438710406035834 0.438721142161322 0 0 hPsi_site_20893 iPseU_CNN:0;iRNA_PseU:0 20894 chr9 72659550 72659550 1 + G A SARC 72659549 + 72659529 72659569 41 CCCGCTGGGTCCTGTGCCTTTGAAGAGAGCACTTGCGGCTT CCCGCTGGGTCCTGTGCCTTTAAAGAGAGCACTTGCGGCTT < 41bp 0.41254621844559 0.829325317035016 0.31642872 0.6338639 prediction 0.658650634070033 Functional Gain - MAMDC2 ENSG00000165072 CDS Human protein_coding chr9:72659549 chr9:72659550 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27170 0 0 0 0 2 nucleus 0.438717074659149 0.438718592999039 0.2677278 0 hPsi_site_20894 iPseU_CNN:0.2677278;iRNA_PseU:0 20895 chr9 33319076 33319076 1 + G A rs546376893 33319075 + 33319055 33319095 41 GAAAACATGCATGGACCCTGTGCCTTCATGTGGAAAAGTGT GAAAACATGCATGGACCCTGTACCTTCATGTGGAAAAGTGT < 41bp 0.411981665453301 0.829323352766896 0.3361163 0.68499714 prediction 0.658646705533793 Functional Gain - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33319075 chr9:33319076 synonymous SNV . 0 22 hPsi_associated_SNPs_27171 0 0 1 0 1 Nucleus 0.438449301567915 0.438313701633773 0.36999428 0 hPsi_site_20895 iPseU_CNN:0.36999428;iRNA_PseU:0 20896 chr9 126794764 126794764 1 + G A SKCM 126794763 + 126794743 126794783 41 ACGGCAGGAAAACACGGGCGTGGACAAGTCGACAGACGCGG ACGGCAGGAAAACACGGGCGTAGACAAGTCGACAGACGCGG < 41bp 0.425581354363279 0.829322779350062 0.24492314 0.39801335 prediction 0.658645558700125 Functional Gain - LHX2 ENSG00000106689 CDS Human protein_coding chr9:126794763 chr9:126794764 synonymous SNV . 0 22 hPsi_associated_SNPs_27172 0 0 0 0 1 Cytosol 0.438720228622468 0.438718589744498 0 0 hPsi_site_20896 iPseU_CNN:0;iRNA_PseU:0 20897 chr2 112779020 112779020 1 + C A OV 112779019 + 112778999 112779039 41 GTTGCGAGATGACATGACTGTCTGTGTTGCGGACTTCGGCC GTTGCGAGATGACATGACTGTATGTGTTGCGGACTTCGGCC < 41bp 0.454289389501217 0.829315406289947 0.28538918 0.6887625 prediction 0.658630812579894 Functional Gain - MERTK ENSG00000153208 CDS Human protein_coding chr2:112779019 chr2:112779020 synonymous SNV . 0 22 hPsi_associated_SNPs_27173 0 0 1 0 1 Endoplasmic reticulum 0.43515310074945 0.43820466152137 0.377525 0 hPsi_site_20897 iPseU_CNN:0.377525;iRNA_PseU:0 20898 chr15 102291782 102291782 1 + G A ESCA 102291781 + 102291761 102291801 41 GAATGGCTCCCACAGCTTCATGCACTCCATGGACCCACAGC GAATGGCTCCCACAGCTTCATACACTCCATGGACCCACAGC < 41bp 0.483780362074642 0.829315276086078 0.40605223 0.7406169 prediction 0.658630552172155 Functional Gain - LOC100128108;OR4F6 ENSG00000259660 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:102291781 chr15:102291782 . . 0 22 hPsi_associated_SNPs_27174 0 0 0 0 1 unknown 0.436898684416864 0.437320495088635 0.4812338 0 hPsi_site_20898 iPseU_CNN:0.4812338;iRNA_PseU:0 20899 chr9 91926131 91926131 1 + G A rs541610603 91926130 + 91926110 91926150 41 GTTAGTCTCCGGCGAGTTGTTGCCTGGGCTGGACGTGGTTT GTTAGTCTCCGGCGAGTTGTTACCTGGGCTGGACGTGGTTT < 41bp 0.493145929476165 0.829310484077748 0.25336918 0.5929692 prediction 0.658620968155497 Functional Gain - CKS2 ENSG00000123975 UTR5 Human protein_coding chr9:91926130 chr9:91926131 . . 0 22 hPsi_associated_SNPs_27175 0 0 1 0 0 Ribosome 0.438718404649038 0.438719157554812 0.1859384 0 hPsi_site_20899 iPseU_CNN:0.1859384;iRNA_PseU:0 20900 chr22 50279381 50279381 1 + C A OV 50279380 + 50279360 50279400 41 CTGCTTGAATACTTGAAACCTCAGTACTCCCTCCCCGCCCC CTGCTTGAATACTTGAAACCTAAGTACTCCCTCCCCGCCCC < 41bp 0.526429091921631 0.855739091219551 0.22602454 0.30900544 prediction 0.658619998595841 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279380 chr22:50279381 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27176 0 0 1 0 0 chromatin 0.438718592269079 0.438718593503613 0 0 hPsi_site_20900 iPseU_CNN:0;iRNA_PseU:0 20901 chr7 31142865 31142865 1 + C A LUSC 31142864 + 31142844 31142884 41 CCGACAGGCGACTGGCCCGGTCCACCCTGCTGCTCATCCCA CCGACAGGCGACTGGCCCGGTACACCCTGCTGCTCATCCCA < 41bp 0.5420536604864 0.871357574714593 0.34204128 0.8683572 prediction 0.658607828456387 Functional Gain - ADCYAP1R1 ENSG00000078549 CDS Human protein_coding chr7:31142864 chr7:31142865 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_27177 0 0 0 0 1 exosome 0.438776120985829 0.438718984108627 0.7367144 0 hPsi_site_20901 iPseU_CNN:0.7367144;iRNA_PseU:0 20902 chr14 53066882 53066882 1 + G A SKCM 53066881 + 53066861 53066901 41 AAGCCTGCTCTTTTTAGTGGTGAACTTGACTTGCGCAATGC AAGCCTGCTCTTTTTAGTGGTAAACTTGACTTGCGCAATGC < 41bp 0.419230053213377 0.829298977127278 0.41774696 0.59829277 prediction 0.658597954254556 Functional Gain - GPR137C ENSG00000180998 CDS Human protein_coding chr14:53066881 chr14:53066882 synonymous SNV . 0 22 hPsi_associated_SNPs_27178 0 0 1 0 1 chromatin 0.438641557383985 0.438734651868957 0.19658554 0 hPsi_site_20902 iPseU_CNN:0.19658554;iRNA_PseU:0 20903 chr3 49051378 49051378 1 + C A UCEC 49051377 + 49051357 49051397 41 GCCTGACTGCCCATGTGGTGTCTGCGGGGGGGCGGGCTGAG GCCTGACTGCCCATGTGGTGTATGCGGGGGGGCGGGCTGAG < 41bp 0.468053395984268 0.829297572573797 0.26799428 0.3270268 prediction 0.658595145147594 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49051377 chr3:49051378 nonsynonymous SNV 0.923 4 22 hPsi_associated_SNPs_27179 0 0 1 0 0 Nucleus 0.4387185930053 0.43871859287129 0 0 hPsi_site_20903 iPseU_CNN:0;iRNA_PseU:0 20904 chr3 150340917 150340917 1 + G A DLBC 150340916 + 150340896 150340936 41 TCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGC TCCTTTTGCTTTCTTTGGCATACAAGCTCCTAGCATCTGGC < 41bp 0.435424827976211 0.829296793876111 0.31012642 0.4690167 prediction 0.658593587752223 Functional Gain - SELENOT ENSG00000198843 CDS Human protein_coding chr3:150340916 chr3:150340917 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27180 0 0 0 0 2 unknown 0.438794897320523 0.43868219669182 0 0 hPsi_site_20904 iPseU_CNN:0;iRNA_PseU:0 20905 chr17 4713248 4713248 1 + G A HNSC 4713247 + 4713227 4713267 41 ATCTCATTTGTTCAGCTCTTTGACCCTGGCTTTGAGGTGCA ATCTCATTTGTTCAGCTCTTTAACCCTGGCTTTGAGGTGCA < 41bp 0.409600331662212 0.829285756610784 0.20556822 0.32165214 prediction 0.658571513221568 Functional Gain - PLD2 ENSG00000129219 CDS Human protein_coding chr17:4713247 chr17:4713248 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_27181 0 0 0 0 2 Cytosol 0.438402824825901 0.438731297255171 0 0 hPsi_site_20905 iPseU_CNN:0;iRNA_PseU:0 20906 chr22 24977952 24977952 1 + G A rs62231185 24977951 + 24977931 24977971 41 TAGCAGCAGCTAGGATCAGTTGCCCAAGACTCTGGATTCTC TAGCAGCAGCTAGGATCAGTTACCCAAGACTCTGGATTCTC < 41bp 0.46194925292723 0.829279193969812 0.17780617 0.82164025 prediction 0.658558387939624 Functional Gain - SNRPD3;GGT1 ENSG00000100028 UTR3 Human protein_coding chr22:24977951 chr22:24977952 . . 0 22 hPsi_associated_SNPs_27182 0 0 0 0 1 unknown 0.438719831634136 0.438718149830207 0.6432805 0 hPsi_site_20906 iPseU_CNN:0.6432805;iRNA_PseU:0 20907 chr16 68598159 68598159 1 + C A UCEC 68598158 + 68598138 68598178 41 CTTTTAGTCAGCAAGCTATTTCTCATCCTGGAGAGAAACCC CTTTTAGTCAGCAAGCTATTTATCATCCTGGAGAGAAACCC < 41bp 0.511834676075573 0.841113556014841 0.26164111 0.31117383 prediction 0.658557759878536 Functional Gain - ZFP90 ENSG00000184939 CDS Human protein_coding chr16:68598158 chr16:68598159 nonsynonymous SNV 0.904 1 22 hPsi_associated_SNPs_27183 0 0 1 2 0 Cytosol 0.438718568394481 0.43868727115517 0 0 hPsi_site_20907 iPseU_CNN:0;iRNA_PseU:0 20908 chr1 28861634 28861634 1 + G A HNSC 28861633 + 28861613 28861653 41 CCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGC CCTGTGCAGGTGCAGCTGGATATGCCTGTGGTAAAGGTGGC < 41bp 0.407121010891818 0.829276013558131 0.29157215 0.71406937 prediction 0.658552027116262 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861633 chr1:28861634 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_27184 0 0 1 0 2 Ribosome 0.438727333191914 0.438719990473241 0.42813874 0 hPsi_site_20908 iPseU_CNN:0.42813874;iRNA_PseU:0 20909 chr16 30990611 30990611 1 + C A UCEC 30990610 + 30990590 30990630 41 CAAGAAACGCCGGAAAACTGTCTCCTTCTCTGCCATCGAGG CAAGAAACGCCGGAAAACTGTATCCTTCTCTGCCATCGAGG < 41bp 0.462256308995313 0.829271593017957 0.32720667 0.7081674 prediction 0.658543186035914 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990610 chr16:30990611 synonymous SNV . 0 22 hPsi_associated_SNPs_27185 0 0 1 0 0 Cytosol 0.438507127477408 0.438919908296117 0.4163348 0 hPsi_site_20909 iPseU_CNN:0.4163348;iRNA_PseU:0 20910 chr16 1035548 1035548 1 + G A rs3751669 1035547 + 1035527 1035567 41 CGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGA CGTGGCCCTCGGCCTCCAGATAGCCACACCTCTGCCGACGA < 41bp 0.459584383480808 0.829268783507617 0.3137908 0.541303 prediction 0.658537567015233 Functional Gain - SOX8 ENSG00000005513 UTR3 Human protein_coding chr16:1035547 chr16:1035548 . . 0 22 hPsi_associated_SNPs_27186 0 0 0 0 0 exosome 0.438700361757811 0.438716761520694 0.082606 0 hPsi_site_20910 iPseU_CNN:0.082606;iRNA_PseU:0 20911 chr14 20296402 20296402 1 + C A OV 20296401 + 20296381 20296421 41 CACGCGCCCCTTCAGGGCTTTCCCAGCTGACAAGGTGGTTT CACGCGCCCCTTCAGGGCTTTACCAGCTGACAAGGTGGTTT < 41bp 0.513470582724867 0.842738299062518 0.18367901 0.44579405 prediction 0.658535432675302 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20296401 chr14:20296402 nonsynonymous SNV 0.502 0 22 hPsi_associated_SNPs_27187 0 0 0 0 0 unknown 0.438718593199495 0.438708767662563 0 0 hPsi_site_20911 iPseU_CNN:0;iRNA_PseU:0 20912 chr12 49666851 49666851 1 + G A LUSC 49666850 + 49666830 49666870 41 CCTGGACCACAAGTTTGACCTGATGTATGCCAAGCGTGCCT CCTGGACCACAAGTTTGACCTAATGTATGCCAAGCGTGCCT < 41bp 0.425705489460807 0.829264616025878 0.21697032 0.30670798 prediction 0.658529232051755 Functional Gain - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666850 chr12:49666851 synonymous SNV . 0 22 hPsi_associated_SNPs_27188 0 0 1 0 0 Cytosol 0.438718423231678 0.438718515460865 0 0 hPsi_site_20912 iPseU_CNN:0;iRNA_PseU:0 20913 chr1 47264759 47264759 1 + G A UCEC 47264758 + 47264738 47264778 41 GGCTGGAACTGCAACCATGGTGCCCAGCTTCCTCTCCCTGA GGCTGGAACTGCAACCATGGTACCCAGCTTCCTCTCCCTGA < 41bp 0.556512742990298 0.885768082674023 0.28214517 0.75419563 prediction 0.658510679367449 Functional Gain - CYP4B1 ENSG00000142973 CDS Human protein_coding chr1:47264758 chr1:47264759 synonymous SNV . 0 22 hPsi_associated_SNPs_27189 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0.50839126 0 hPsi_site_20913 iPseU_CNN:0.50839126;iRNA_PseU:0 20914 chr11 4608670 4608670 1 + G A STAD 4608669 + 4608649 4608689 41 GTGGTTGTCCACTCCTACTGTGAGCACATAGCTTTGGCCAG GTGGTTGTCCACTCCTACTGTAAGCACATAGCTTTGGCCAG < 41bp 0.429025907919846 0.829254890936683 0.23183253 0.30682477 prediction 0.658509781873367 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608669 chr11:4608670 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_27190 0 0 0 0 0 unknown 0.438711549499201 0.438718520941179 0 0 hPsi_site_20914 iPseU_CNN:0;iRNA_PseU:0 20915 chr17 9515687 9515687 1 + C A UCEC 9515686 + 9515666 9515706 41 CGAGGAGAAGGACACCAGTTTCTCGTAGGAACAGAAGAATC CGAGGAGAAGGACACCAGTTTATCGTAGGAACAGAAGAATC < 41bp 0.538756265932492 0.868003146260471 0.21146265 0.27879548 prediction 0.658493760655958 Functional Gain - CFAP52 ENSG00000166596 CDS Human protein_coding chr17:9515686 chr17:9515687 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_27191 0 0 0 0 1 nucleus 0.438718622310856 0.438718592984738 0 0 hPsi_site_20915 iPseU_CNN:0;iRNA_PseU:0 20916 chr3 51853272 51853272 1 + G A rs2271068 51853271 + 51853251 51853291 41 CTGATGGTGGGGCACGCTGGTGCAATGCACACTACTGCACG CTGATGGTGGGGCACGCTGGTACAATGCACACTACTGCACG < 41bp 0.531141814236798 0.860385539908146 0.7231494 0.94567347 prediction 0.658487451342696 Functional Gain - IQCF4 ENSG00000224792 ncRNA_exonic Human transcribed_processed_pseudogene chr3:51853271 chr3:51853272 . . 0 22 hPsi_associated_SNPs_27192 0 0 0 0 1 unknown 0.417281974199445 0.423632839022305 0.44504814 0 hPsi_site_20916 iPseU_CNN:0.44504814;iRNA_PseU:0 20917 chr3 127327729 127327729 1 + G A UCEC 127327728 + 127327708 127327748 41 GGCTCCCTCAACACTGCCAATGGCTTCCCTGTCTTTGCCAC GGCTCCCTCAACACTGCCAATAGCTTCCCTGTCTTTGCCAC < 41bp 0.405638101631305 0.82923790543315 0.3161021 0.36655158 prediction 0.658475810866299 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127327728 chr3:127327729 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_27193 0 0 1 0 1 Cytosol 0.438718592995102 0.438718592987678 0 0 hPsi_site_20917 iPseU_CNN:0;iRNA_PseU:0 20918 chr20 44507536 44507536 1 + G A rs4812973 44507535 + 44507515 44507555 41 CAAGGCCAAAGTTATCTCCGTGCTGCAAGGTCACCCTCTTC CAAGGCCAAAGTTATCTCCGTACTGCAAGGTCACCCTCTTC < 41bp 0.476004282495608 0.829235978124424 0.3820355 0.8320915 prediction 0.658471956248848 Functional Gain - ZSWIM3 ENSG00000132801 UTR3 Human protein_coding chr20:44507535 chr20:44507536 . . 0 22 hPsi_associated_SNPs_27194 0 1 1 0 0 Cytosol 0.438701186617804 0.438634762207398 0.664183 0 hPsi_site_20918 iPseU_CNN:0.664183;iRNA_PseU:0 20919 chr12 55524451 55524451 1 + G A rs375038831 55524450 + 55524430 55524470 41 TGAGTAAAGTGGCATCCTTATGTTACTCCCTAGTCACTCCC TGAGTAAAGTGGCATCCTTATATTACTCCCTAGTCACTCCC < 41bp 0.544827936228003 0.874061731426752 0.8627387 0.9556265 prediction 0.658467590397499 Functional Gain - OR9K2 ENSG00000170605 CDS Human protein_coding chr12:55524450 chr12:55524451 nonsynonymous SNV 0.883 4 22 hPsi_associated_SNPs_27195 0 0 0 0 0 unknown 0.438718593105633 0.438718593004514 0.1857756 0 hPsi_site_20919 iPseU_CNN:0.1857756;iRNA_PseU:0 20920 chr15 74468988 74468988 1 + G A rs191499986 74468987 + 74468967 74469007 41 AAGCTCCTCCTGCTCCTTGCTGTTTTCTGATGATTTGGGGG AAGCTCCTCCTGCTCCTTGCTATTTTCTGATGATTTGGGGG < 41bp 0.517041382429443 0.846275072618948 0.27451453 0.4761324 prediction 0.658467380379009 Functional Gain - ISLR ENSG00000261543 ncRNA_intronic Human antisense chr15:74468987 chr15:74468988 . . 0 22 hPsi_associated_SNPs_27196 0 0 0 0 0 Cytosol 0.438718563441658 0.43871859578816 0 0 hPsi_site_20920 iPseU_CNN:0;iRNA_PseU:0 20921 chr10 103922004 103922004 1 + C A UCEC 103922003 + 103921983 103922023 41 CAATCTCTGTCCAGGTCAATTCTATTAAGTTTGACAGCGAG CAATCTCTGTCCAGGTCAATTATATTAAGTTTGACAGCGAG < 41bp 0.520991483213222 0.850217769791226 0.33777842 0.38359213 prediction 0.658452573156008 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103922003 chr10:103922004 nonsynonymous SNV 0.856 4 22 hPsi_associated_SNPs_27197 0 0 1 0 0 Nucleus 0.438751764093679 0.43830425676195 0 0 hPsi_site_20921 iPseU_CNN:0;iRNA_PseU:0 20922 chr5 95115998 95115998 1 + G A COAD 95115997 + 95115977 95116017 41 GGGCCATCCTGGTGGCCCGTTGTGAAGTGATGGCAGCCATG GGGCCATCCTGGTGGCCCGTTATGAAGTGATGGCAGCCATG < 41bp 0.408870392103026 0.829223051822445 0.38399145 0.34014708 prediction 0.658446103644891 Functional Gain - RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95115997 chr5:95115998 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_27198 0 0 1 0 1 Cytosol 0.438831885229634 0.438703514362361 0 0 hPsi_site_20922 iPseU_CNN:0;iRNA_PseU:0 20923 chr13 32527156 32527156 1 + G A CESC 32527155 + 32527135 32527175 41 GACCTGTTTGGCAGCGACAATGAGGCAACACAGCTGCGGCA GACCTGTTTGGCAGCGACAATAAGGCAACACAGCTGCGGCA < 41bp 0.437795933374697 0.829222501461948 0.21405193 0.29754516 prediction 0.658445002923896 Functional Gain - EEF1DP3 ENSG00000229715 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr13:32527155 chr13:32527156 . . 0 22 hPsi_associated_SNPs_27199 0 0 0 0 0 unknown 0.438718685980373 0.438718589503291 0 0 hPsi_site_20923 iPseU_CNN:0;iRNA_PseU:0 20924 chr7 73932497 73932497 1 + G A rs141229529 73932496 + 73932476 73932516 41 CCTGGGAAGGGCCAGTGTGGTGCCACTGCCCTATGAGAGGC CCTGGGAAGGGCCAGTGTGGTACCACTGCCCTATGAGAGGC < 41bp 0.412483785869595 0.829220258367235 0.3495236 0.72982144 prediction 0.658440516734469 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73932496 chr7:73932497 synonymous SNV . 0 22 hPsi_associated_SNPs_27200 0 0 1 0 1 Nucleus 0.438718720570675 0.438718721189232 0.45964288 0 hPsi_site_20924 iPseU_CNN:0.45964288;iRNA_PseU:0 20925 chr11 64085714 64085714 1 + G A BLCA 64085713 + 64085693 64085733 41 ACTAGCTGGCGTGTGCGCCCTGAGACGCTCAGCGGGCTATA ACTAGCTGGCGTGTGCGCCCTAAGACGCTCAGCGGGCTATA < 41bp 0.450101154449471 0.829220133121715 0.29617715 0.3412049 prediction 0.658440266243429 Functional Gain - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64085713 chr11:64085714 synonymous SNV . 0 22 hPsi_associated_SNPs_27201 0 0 1 0 0 Cytosol 0.438536387575628 0.438753280149759 0 0 hPsi_site_20925 iPseU_CNN:0;iRNA_PseU:0 20926 chr11 125367759 125367759 1 + G A rs61918963 125367758 + 125367738 125367778 41 TGTGCGTGGTGGCGGGCGCCTGTAGTCCCAATTACTCGGGA TGTGCGTGGTGGCGGGCGCCTATAGTCCCAATTACTCGGGA < 41bp 0.524276351811069 0.853493816420753 0.44576386 0.66510093 prediction 0.658434929219368 Functional Gain - LOC403312 ENSG00000255537 UTR3 Human antisense chr11:125367758 chr11:125367759 . . 0 22 hPsi_associated_SNPs_27202 0 0 0 0 0 unknown 0.438718111757063 0.438718665451042 0.33020186 0 hPsi_site_20926 iPseU_CNN:0.33020186;iRNA_PseU:0 20927 chr19 3586531 3586531 1 + G T PRAD 3586530 + 3586510 3586550 41 CAACAGCCACAAAGTGGACATGCAGAAGCTCCTGGGGGGTC CAACAGCCACAAAGTGGACATTCAGAAGCTCCTGGGGGGTC < 41bp 0.507065459558811 0.83628233006139 0.3448718 0.5247774 prediction 0.658433741005158 Functional Gain - GIPC3 ENSG00000179855 CDS Human protein_coding chr19:3586530 chr19:3586531 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_27203 0 0 0 0 1 exosome 0.438721037325349 0.439069266840008 0.0495547999999999 0 hPsi_site_20927 iPseU_CNN:0.0495547999999999;iRNA_PseU:0 20928 chr1 248512532 248512532 1 + C A BLCA 248512531 + 248512511 248512551 41 CTCCCTACTCAGTGGTCTTGTCTATGCAGGCATGCACACTG CTCCCTACTCAGTGGTCTTGTATATGCAGGCATGCACACTG < 41bp 0.518435278932939 0.847650646277939 0.2130343 0.24501184 prediction 0.658430734689998 Functional Gain - OR14C36 ENSG00000177174 CDS Human protein_coding chr1:248512531 chr1:248512532 synonymous SNV . 0 22 hPsi_associated_SNPs_27204 0 0 0 0 0 unknown 0.438781914088262 0.438672094879203 0 0 hPsi_site_20928 iPseU_CNN:0;iRNA_PseU:0 20929 chr2 120020755 120020755 1 + G A rs61746941 120020754 + 120020734 120020774 41 TCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCA TCCCACCTTCACGCTCACGCTACTGGTGCCCTGCGTCGTCA < 41bp 0.428219490375912 0.82921368201612 0.33262342 0.85355264 prediction 0.65842736403224 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120020754 chr2:120020755 synonymous SNV . 0 22 hPsi_associated_SNPs_27205 0 0 1 0 0 Ribosome 0.431142936638268 0.432692469556014 0.70710528 0 hPsi_site_20929 iPseU_CNN:0.70710528;iRNA_PseU:0 20930 chr12 122691716 122691716 1 + C A UCEC 122691715 + 122691695 122691735 41 ACTCTTCCCCATTGATGATGTCTTTGTGGGTATGTGCCTGA ACTCTTCCCCATTGATGATGTATTTGTGGGTATGTGCCTGA < 41bp 0.464696529327041 0.829213304483927 0.29940507 0.5778756 prediction 0.658426608967854 Functional Gain - B3GNT4 ENSG00000176383 CDS Human protein_coding chr12:122691715 chr12:122691716 synonymous SNV . 0 22 hPsi_associated_SNPs_27206 0 0 0 0 0 chromatin 0.439619474049656 0.43817992225671 0.1557512 0 hPsi_site_20930 iPseU_CNN:0.1557512;iRNA_PseU:0 20931 chr1 179620089 179620089 1 + G A LUSC 179620088 + 179620068 179620108 41 GTAGTGGATGAATATGTAGATGGAATCCTTAACATTTTTTT GTAGTGGATGAATATGTAGATAGAATCCTTAACATTTTTTT < 41bp 0.418532434168528 0.829209791962536 0.33569187 0.47639638 prediction 0.658419583925072 Functional Gain - TDRD5 ENSG00000162782 CDS Human protein_coding chr1:179620088 chr1:179620089 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27207 0 0 0 0 1 cytosol 0.438765679366044 0.438714308941526 0 0 hPsi_site_20931 iPseU_CNN:0;iRNA_PseU:0 20932 chr1 177226496 177226496 1 + C A LUAD 177226495 + 177226475 177226515 41 GCTGCGACGGCTGCACCATATCCAGATAGCCACGGGGGCCA GCTGCGACGGCTGCACCATATACAGATAGCCACGGGGGCCA < 41bp 0.54508309848539 0.87429158022997 0.34616932 0.63888395 prediction 0.65841696348916 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177226495 chr1:177226496 synonymous SNV . 0 22 hPsi_associated_SNPs_27208 0 0 0 0 1 Nucleus 0.438718638359086 0.43872114623559 0.2777679 0 hPsi_site_20932 iPseU_CNN:0.2777679;iRNA_PseU:0 20933 chr9 114411817 114411817 1 + G A LUAD 114411816 + 114411796 114411836 41 CGTATCCAAGCTACAGAGATTGCCAAGCAGCAGGGACTGCT CGTATCCAAGCTACAGAGATTACCAAGCAGCAGGGACTGCT < 41bp 0.429135098526555 0.829207255101 0.32201606 0.60628 prediction 0.658414510202 Functional Gain - DNAJC25 ENSG00000059769 CDS Human protein_coding chr9:114411816 chr9:114411817 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_27209 0 0 1 0 1 nucleolus 0.438685593576717 0.438621439349112 0.21256 0 hPsi_site_20933 iPseU_CNN:0.21256;iRNA_PseU:0 20934 chr1 9776596 9776596 1 + G A SKCM 9776595 + 9776575 9776615 41 AGTGTTCCGGCAGCCGCTGGTGGAGCAGCCGGAAGACTACA AGTGTTCCGGCAGCCGCTGGTAGAGCAGCCGGAAGACTACA < 41bp 0.416671079423338 0.829201897541424 0.22186399 0.30980736 prediction 0.658403795082848 Functional Gain - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9776595 chr1:9776596 synonymous SNV . 0 22 hPsi_associated_SNPs_27210 0 0 0 0 2 Nucleus 0.438718597581416 0.43871862533353 0 0 hPsi_site_20934 iPseU_CNN:0;iRNA_PseU:0 20935 chr16 30735348 30735348 1 + C A rs117804715 30735347 + 30735327 30735367 41 GCTCCCACCTCTTCACATGTTCCAGGGTTGAACTCAACCGT GCTCCCACCTCTTCACATGTTACAGGGTTGAACTCAACCGT < 41bp 0.465581049400348 0.829190389656427 0.348797 0.4400374 prediction 0.658380779312855 Functional Gain - SRCAP ENSG00000080603 CDS Human protein_coding chr16:30735347 chr16:30735348 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27211 0 0 1 0 0 Ribosome 0.438716124100518 0.438719063088522 0 0 hPsi_site_20935 iPseU_CNN:0;iRNA_PseU:0 20936 chr5 131994031 131994031 1 + C A rs34255686 131994030 + 131994010 131994050 41 GGAGCTCATTGAGGAGCTGGTCAACATCACCCAGAACCAGA GGAGCTCATTGAGGAGCTGGTAAACATCACCCAGAACCAGA < 41bp 0.51553999057937 0.844725686526744 0.18184397 0.6520393 prediction 0.658371391894748 Functional Gain - IL13 ENSG00000169194 CDS Human protein_coding chr5:131994030 chr5:131994031 synonymous SNV . 0 22 hPsi_associated_SNPs_27212 0 0 0 0 1 exosome 0.438724135460913 0.438731134239816 0.3040786 0 hPsi_site_20936 iPseU_CNN:0.3040786;iRNA_PseU:0 20937 chr2 231937062 231937062 1 + G A OV 231937061 + 231937041 231937081 41 ATCCAGAATCTTCGAACTGTTGGCACCCCTATTGCTTCTGT ATCCAGAATCTTCGAACTGTTAGCACCCCTATTGCTTCTGT < 41bp 0.424257102412692 0.829184488624191 0.22184405 0.54578876 prediction 0.658368977248383 Functional Gain - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231937061 chr2:231937062 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_27213 0 0 1 0 1 Nucleus 0.438718534466639 0.438718681751998 0.09157752 0 hPsi_site_20937 iPseU_CNN:0.09157752;iRNA_PseU:0 20938 chr14 24842959 24842959 1 + G A BLCA 24842958 + 24842938 24842978 41 GACATTGAGCTTCGGAAGGGTGAGACGGACATCGGGCGCAA GACATTGAGCTTCGGAAGGGTAAGACGGACATCGGGCGCAA < 41bp 0.537249967994165 0.866432930372248 0.2296029 0.6813195 prediction 0.658365924756166 Functional Gain - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24842958 chr14:24842959 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_27214 0 0 0 0 0 cytosol 0.438718224024179 0.438705261896288 0.362639 0 hPsi_site_20938 iPseU_CNN:0.362639;iRNA_PseU:0 20939 chrX 103040659 103040659 1 + C A UCS 103040658 + 103040638 103040678 41 AAAGCTAATTGAGACCTATTTCTCCAAAAACTACCAAGACT AAAGCTAATTGAGACCTATTTATCCAAAAACTACCAAGACT < 41bp 0.467551159112292 0.829181506268147 0.2706471 0.2990214 prediction 0.658363012536294 Functional Gain - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103040658 chrX:103040659 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27215 0 0 0 0 1 Endoplasmic reticulum 0.438718592987706 0.438718581275471 0 0 hPsi_site_20939 iPseU_CNN:0;iRNA_PseU:0 20940 chr5 140580539 140580539 1 + G A CESC 140580538 + 140580518 140580558 41 TTCGTGCTAAAATCTTCAGTTGAGAATTACTACACGTTGGA TTCGTGCTAAAATCTTCAGTTAAGAATTACTACACGTTGGA < 41bp 0.439488121505196 0.829179518201677 0.2723881 0.32874298 prediction 0.658359036403354 Functional Gain - PCDHB11 ENSG00000197479 CDS Human protein_coding chr5:140580538 chr5:140580539 nonsynonymous SNV 0.035 0 22 hPsi_associated_SNPs_27216 0 0 0 0 0 Nucleus 0.438849613357392 0.438666926256157 0 0 hPsi_site_20940 iPseU_CNN:0;iRNA_PseU:0 20941 chr12 22199411 22199411 1 + C A rs371978033 22199410 + 22199390 22199430 41 CCGGGGAGGCAGCAAAGGCATCCCCCTGAAGAACATTAAGC CCGGGGAGGCAGCAAAGGCATACCCCTGAAGAACATTAAGC < 41bp 0.520677355916114 0.8498555733701 0.17497972 0.34595013 prediction 0.658356434907972 Functional Gain - CMAS ENSG00000111726 CDS Human protein_coding chr12:22199410 chr12:22199411 synonymous SNV . 0 22 hPsi_associated_SNPs_27217 0 0 1 0 1 Ribosome 0.438718592936036 0.438718613593684 0 0 hPsi_site_20941 iPseU_CNN:0;iRNA_PseU:0 20942 chr6 7584018 7584018 1 + C A KIRC 7584017 + 7583997 7584037 41 AGTCAGAAAAACTTTGTGGATCCAGTCACCAAAAAGAAGGT AGTCAGAAAAACTTTGTGGATACAGTCACCAAAAAGAAGGT < 41bp 0.510436210334546 0.839604246615016 0.39294875 0.75139016 prediction 0.658336072560941 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7584017 chr6:7584018 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_27218 0 0 1 0 0 Nucleus 0.438718288570694 0.438258996243438 0.50278032 0 hPsi_site_20942 iPseU_CNN:0.50278032;iRNA_PseU:0 20943 chr11 34937698 34937698 1 + G A rs16926448 34937697 + 34937677 34937717 41 AAACGCCCGGCCCGCTACCCTGCGCCCAGCTCCAGCCGCCG AAACGCCCGGCCCGCTACCCTACGCCCAGCTCCAGCCGCCG < 41bp 0.451423354124318 0.82916114924263 0.4449343 0.85625124 prediction 0.65832229848526 Functional Gain - PDHX ENSG00000110435 UTR5 Human protein_coding chr11:34937697 chr11:34937698 . . 0 22 hPsi_associated_SNPs_27219 1 0 0 0 0 Ribosome 0.438719155335008 0.438717855513063 0.71250248 0 hPsi_site_20943 iPseU_CNN:0.71250248;iRNA_PseU:0 20944 chr3 100015071 100015071 1 + C A UCEC 100015070 + 100015050 100015090 41 AGAAGATATAGAAGACCTTTTCTCTCTGGCTCAGTATTATT AGAAGATATAGAAGACCTTTTATCTCTGGCTCAGTATTATT < 41bp 0.474336107682486 0.829157881988705 0.23131043 0.3026939 prediction 0.658315763977411 Functional Gain - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100015070 chr3:100015071 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_27220 0 0 1 0 1 Ribosome 0.438718529046352 0.43871785055964 0 0 hPsi_site_20944 iPseU_CNN:0;iRNA_PseU:0 20945 chr5 140049193 140049193 1 + C A PAAD 140049192 + 140049172 140049212 41 TGAGGGAAGAGGGAGAAGACTCCATGGCTCAGGAAGAAAAG TGAGGGAAGAGGGAGAAGACTACATGGCTCAGGAAGAAAAG < 41bp 0.511889898449792 0.841047372893955 0.23551944 0.3154692 prediction 0.658314948888327 Functional Gain - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049192 chr5:140049193 nonsynonymous SNV 0.011 1 22 hPsi_associated_SNPs_27221 0 0 1 0 0 Ribosome 0.438718593574418 0.438293663034541 0 0 hPsi_site_20945 iPseU_CNN:0;iRNA_PseU:0 20946 chr19 57955686 57955686 1 + C A COAD 57955685 + 57955665 57955705 41 ATGCAGCATATGTGGAAAATTCTTTAGTCACCGCTCCACAC ATGCAGCATATGTGGAAAATTATTTAGTCACCGCTCCACAC < 41bp 0.478829037554445 0.829148581233319 0.3997293 0.57057136 prediction 0.658297162466637 Functional Gain - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57955685 chr19:57955686 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27222 0 0 0 0 0 exosome 0.437865034780469 0.43828782512426 0.14114272 0 hPsi_site_20946 iPseU_CNN:0.14114272;iRNA_PseU:0 20947 chr2 85617502 85617502 1 + C A UCEC 85617501 + 85617481 85617521 41 GTTCTTCCCCATCCACACTTTCTCAAATTCCAGCTTACCAA GTTCTTCCCCATCCACACTTTATCAAATTCCAGCTTACCAA < 41bp 0.522786890056047 0.851933392390411 0.37268496 0.36104494 prediction 0.658293004668728 Functional Gain - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85617501 chr2:85617502 nonsynonymous SNV 0.066 1 22 hPsi_associated_SNPs_27223 0 0 1 0 0 Cytosol 0.438718588635378 0.438718592998404 0 0 hPsi_site_20947 iPseU_CNN:0;iRNA_PseU:0 20948 chr3 51749249 51749249 1 + G A SKCM 51749248 + 51749228 51749268 41 TGGACACCAGCCTCATCCCATGGGCCTCACCCTCAGCCGGC TGGACACCAGCCTCATCCCATAGGCCTCACCCTCAGCCGGC < 41bp 0.571754132907512 0.900897869836216 0.21827227 0.39119095 prediction 0.658287473857407 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51749248 chr3:51749249 stopgain 0.998 1 22 hPsi_associated_SNPs_27224 0 0 0 0 0 Endoplasmic reticulum 0.43871861783186 0.438678793114506 0 0 hPsi_site_20948 iPseU_CNN:0;iRNA_PseU:0 20949 chr19 18879539 18879539 1 + C A LUSC 18879538 + 18879518 18879558 41 CGCTTGCAGTCACGGTACCGTCCTCTCTCCCCCAGTCCCCC CGCTTGCAGTCACGGTACCGTACTCTCTCCCCCAGTCCCCC < 41bp 0.466479071573751 0.829142430439394 0.34213448 0.77697605 prediction 0.658284860878787 Functional Gain - CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18879538 chr19:18879539 nonsynonymous SNV 0.943 1 22 hPsi_associated_SNPs_27225 0 0 1 0 1 Cytosol 0.438690434385049 0.438511622487734 0.5539521 0 hPsi_site_20949 iPseU_CNN:0.5539521;iRNA_PseU:0 20950 chr1 25785216 25785216 1 + G A LUSC 25785215 + 25785195 25785235 41 CAAAAATGCCAGTGGAGTTGTGAACTCTTCACCTCGAAGTC CAAAAATGCCAGTGGAGTTGTAAACTCTTCACCTCGAAGTC < 41bp 0.422243753143458 0.829139926342072 0.39629972 0.46153986 prediction 0.658279852684144 Functional Gain - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25785215 chr1:25785216 synonymous SNV . 0 22 hPsi_associated_SNPs_27226 0 0 1 0 0 Ribosome 0.437028951451226 0.438718323521883 0 0 hPsi_site_20950 iPseU_CNN:0;iRNA_PseU:0 20951 chr12 122499735 122499735 1 + G A rs114802215 122499734 + 122499714 122499754 41 GACCTCCCATTAGCAAACGGTGTCATGGTTTGGAATGTTCA GACCTCCCATTAGCAAACGGTATCATGGTTTGGAATGTTCA < 41bp 0.500239178704985 0.829374708770352 0.7074976 0.8912027 prediction 0.658271060130734 Functional Gain - BCL7A ENSG00000110987 UTR3 Human protein_coding chr12:122499734 chr12:122499735 . . 0 22 hPsi_associated_SNPs_27227 0 0 1 2 0 Nucleus 0.438727786829144 0.438723364817756 0.3674102 0 hPsi_site_20951 iPseU_CNN:0.3674102;iRNA_PseU:0 20952 chr10 47000164 47000164 1 + G A MESO 47000163 + 47000143 47000183 41 GCCCGCCAGCGAGGACAGCCTGTCTGTGGAGGGCCGGAGGG GCCCGCCAGCGAGGACAGCCTATCTGTGGAGGGCCGGAGGG < 41bp 0.559397795275939 0.888533142274686 0.23346016 0.27273506 prediction 0.658270693997495 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:47000163 chr10:47000164 synonymous SNV . 0 22 hPsi_associated_SNPs_27228 0 0 0 0 0 exosome 0.438718584005987 0.438718613368987 0 0 hPsi_site_20952 iPseU_CNN:0;iRNA_PseU:0 20953 chr14 101201079 101201079 1 + G A LUAD 101201078 + 101201058 101201098 41 TCCTCAACAAGTGCGAGACCTGGGTGTCCAACCTGCGCTAC TCCTCAACAAGTGCGAGACCTAGGTGTCCAACCTGCGCTAC < 41bp 0.567066066820241 0.896200175443064 0.2401754 0.382281 prediction 0.658268217245646 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101201078 chr14:101201079 stopgain 0.991 1 22 hPsi_associated_SNPs_27229 0 0 1 0 1 Endoplasmic reticulum 0.438718554784487 0.438862675284677 0 0 hPsi_site_20953 iPseU_CNN:0;iRNA_PseU:0 20954 chr11 30255299 30255299 1 + G A rs142387406 30255298 + 30255278 30255318 41 CGACAGCACTGATTGTACTGTGCGAGGCCTGGGGCCCAGCT CGACAGCACTGATTGTACTGTACGAGGCCTGGGGCCCAGCT < 41bp 0.562487912816752 0.89161818526146 0.3090443 0.76511574 prediction 0.658260544889416 Functional Gain - FSHB ENSG00000131808 CDS Human protein_coding chr11:30255298 chr11:30255299 synonymous SNV . 0 22 hPsi_associated_SNPs_27230 0 0 0 0 0 unknown 0.438718765889984 0.438708748586096 0.53023148 0 hPsi_site_20954 iPseU_CNN:0.53023148;iRNA_PseU:0 20955 chr12 101017575 101017575 1 + C A UCEC 101017574 + 101017554 101017594 41 ACATGTTTCAGAAACAAAATTCAAAACCCAGCGTGCCAGTT ACATGTTTCAGAAACAAAATTAAAAACCCAGCGTGCCAGTT < 41bp 0.516203142053422 0.845333001636395 0.66420704 0.33010375 prediction 0.658259719165945 Functional Gain - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101017574 chr12:101017575 stopgain 0.564 0 22 hPsi_associated_SNPs_27231 0 0 1 0 0 Cytosol 0.438718592935101 0.438718592947591 0 0 hPsi_site_20955 iPseU_CNN:0;iRNA_PseU:0 20956 chr15 75503149 75503149 1 + G A KICH 75503148 + 75503128 75503168 41 GAGCCCACTGTGGCCAGAGGTGAGCCAGAGAGCCTAGCCCT GAGCCCACTGTGGCCAGAGGTAAGCCAGAGAGCCTAGCCCT < 41bp 0.425428560714291 0.829122885796248 0.27566153 0.36284316 prediction 0.658245771592496 Functional Gain - C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75503148 chr15:75503149 nonsynonymous SNV 0.958 4 22 hPsi_associated_SNPs_27232 0 0 1 1 1 Cytosol 0.436811275142334 0.438718494524896 0 0 hPsi_site_20956 iPseU_CNN:0;iRNA_PseU:0 20957 chr9 37860089 37860089 1 + C A UCEC 37860088 + 37860068 37860108 41 GAAGTCGTAACCCCTGAAGTTCTTGGTGAGAGTGACCACGG GAAGTCGTAACCCCTGAAGTTATTGGTGAGAGTGACCACGG < 41bp 0.467593394547887 0.829122759522912 0.4628408 0.44673166 prediction 0.658245519045824 Functional Gain - DCAF10 ENSG00000122741 CDS Human protein_coding chr9:37860088 chr9:37860089 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27233 0 0 1 0 1 Ribosome 0.437274315606532 0.438332098915111 0 0 hPsi_site_20957 iPseU_CNN:0;iRNA_PseU:0 20958 chr10 30739283 30739283 1 + G A PRAD 30739282 + 30739262 30739302 41 TATGGCGCAGTCCTGTGGGGTGAAACTGTCCATCTCTTTAT TATGGCGCAGTCCTGTGGGGTAAAACTGTCCATCTCTTTAT < 41bp 0.402805399756798 0.82911490697154 0.44870842 0.62002426 prediction 0.65822981394308 Functional Gain - MAP3K8 ENSG00000107968 CDS Human protein_coding chr10:30739282 chr10:30739283 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_27234 0 0 0 0 1 Cytosol 0.438718590178674 0.438718590920028 0.24004852 0 hPsi_site_20958 iPseU_CNN:0.24004852;iRNA_PseU:0 20959 chr1 210415046 210415046 1 + G A STAD 210415045 + 210415025 210415065 41 GATCCATGGAGAAATTATCATGCAGAATAACTGGTGCTTCC GATCCATGGAGAAATTATCATACAGAATAACTGGTGCTTCC < 41bp 0.423919054077214 0.829114089058597 0.28855336 0.64452213 prediction 0.658228178117193 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415045 chr1:210415046 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27235 0 0 1 0 0 exosome 0.438740857665202 0.438675857922953 0.28904426 0 hPsi_site_20959 iPseU_CNN:0.28904426;iRNA_PseU:0 20960 chr4 123332445 123332445 1 + G A SARC 123332444 + 123332424 123332464 41 TGATGGAAAAATCAATATTTTGTACAGAACCAACTTCTAAT TGATGGAAAAATCAATATTTTATACAGAACCAACTTCTAAT < 41bp 0.43471041426888 0.829110222312289 0.40624377 0.6127646 prediction 0.658220444624578 Functional Gain - ADAD1 ENSG00000164113 CDS Human protein_coding chr4:123332444 chr4:123332445 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27236 0 0 0 0 2 exosome 0.438718591145828 0.438718575929025 0.2255292 0 hPsi_site_20960 iPseU_CNN:0.2255292;iRNA_PseU:0 20961 chr17 7249747 7249747 1 + G A BLCA 7249746 + 7249726 7249766 41 TGGTGGATGACCTTCGTCTCTGCACAGTGAAACTCTGCCCT TGGTGGATGACCTTCGTCTCTACACAGTGAAACTCTGCCCT < 41bp 0.416340415384246 0.829109281668443 0.28799266 0.5393845 prediction 0.658218563336886 Functional Gain - ACAP1 ENSG00000072818 CDS Human protein_coding chr17:7249746 chr17:7249747 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27237 0 0 0 0 2 nucleus 0.438688714248802 0.438397524228599 0.0787690000000001 0 hPsi_site_20961 iPseU_CNN:0.0787690000000001;iRNA_PseU:0 20962 chr20 35060912 35060912 1 + G A BLCA 35060911 + 35060891 35060931 41 CAAGAACAACACTACTGAGCTGACTGCCCCACCACCCCCGC CAAGAACAACACTACTGAGCTAACTGCCCCACCACCCCCGC < 41bp 0.415309693429358 0.829101026468495 0.29387456 0.5680043 prediction 0.65820205293699 Functional Gain - DLGAP4 ENSG00000080845 CDS Human protein_coding chr20:35060911 chr20:35060912 synonymous SNV . 0 22 hPsi_associated_SNPs_27238 0 0 0 0 0 Cytosol 0.438718592997763 0.438718592993547 0.1360086 0 hPsi_site_20962 iPseU_CNN:0.1360086;iRNA_PseU:0 20963 chr7 143747983 143747983 1 + C A UCEC 143747982 + 143747962 143748002 41 CCTGGTCCATGTGGTTCTCATCCTGAGGCTGCCCTTCTGTG CCTGGTCCATGTGGTTCTCATACTGAGGCTGCCCTTCTGTG < 41bp 0.518824872591386 0.847925760848205 0.2775336 0.5002608 prediction 0.658201776513638 Functional Gain - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143747982 chr7:143747983 synonymous SNV . 0 22 hPsi_associated_SNPs_27239 0 0 0 0 0 unknown 0.440093534933707 0.438714072152683 0.0005215999999999 0 hPsi_site_20963 iPseU_CNN:0.0005215999999999;iRNA_PseU:0 20964 chr2 177034278 177034278 1 + G A LUAD 177034277 + 177034257 177034297 41 CCTGCCAAGAAGCCCAAAGGTGGGCCCAATGCTTCTAGCTC CCTGCCAAGAAGCCCAAAGGTAGGCCCAATGCTTCTAGCTC < 41bp 0.409037014785985 0.829094796393317 0.34904277 0.7318133 prediction 0.658189592786633 Functional Gain - HOXD3 ENSG00000128652 CDS Human protein_coding chr2:177034277 chr2:177034278 nonsynonymous SNV 0.926 3 22 hPsi_associated_SNPs_27240 0 0 1 0 0 exosome 0.438718592995102 0.438718592995102 0.4636266 0 hPsi_site_20964 iPseU_CNN:0.4636266;iRNA_PseU:0 20965 chr5 154394017 154394017 1 + G A rs188974157 154394016 + 154393996 154394036 41 CAGGGCAACAACTCTAGGACTGTGGCCTCCACAGCTATGAA CAGGGCAACAACTCTAGGACTATGGCCTCCACAGCTATGAA < 41bp 0.429621859156343 0.829091614384203 0.42470378 0.705157 prediction 0.658183228768405 Functional Gain - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154394016 chr5:154394017 nonsynonymous SNV 0.981 1 22 hPsi_associated_SNPs_27241 0 0 0 0 0 exosome 0.438718592842714 0.43871859184841 0.410314 0 hPsi_site_20965 iPseU_CNN:0.410314;iRNA_PseU:0 20966 chr22 29651307 29651307 1 + C A ESCA 29651306 + 29651286 29651326 41 GCAGCAGGCTCAGCTGGAGCTCCTGGCCAGACGGGTCACCC GCAGCAGGCTCAGCTGGAGCTACTGGCCAGACGGGTCACCC < 41bp 0.518678745622591 0.847766904606134 0.13035136 0.5408292 prediction 0.658176317967086 Functional Gain - EMID1 ENSG00000186998 CDS Human protein_coding chr22:29651306 chr22:29651307 synonymous SNV . 0 22 hPsi_associated_SNPs_27242 0 0 0 0 2 chromatin 0.441579370730032 0.43883916433864 0.0816584 0 hPsi_site_20966 iPseU_CNN:0.0816584;iRNA_PseU:0 20967 chr8 120079602 120079602 1 + C A COAD 120079601 + 120079581 120079621 41 TTGCAAATTCAGAGTCTGGGTCTGGATATTGATAGCCGTCC TTGCAAATTCAGAGTCTGGGTATGGATATTGATAGCCGTCC < 41bp 0.516451007588331 0.845536615403885 0.18571833 0.29030788 prediction 0.658171215631107 Functional Gain - COLEC10 ENSG00000184374 CDS Human protein_coding chr8:120079601 chr8:120079602 nonsynonymous SNV 0.918 2 22 hPsi_associated_SNPs_27243 0 0 0 0 1 exosome 0.438718583082732 0.438718590630285 0 0 hPsi_site_20967 iPseU_CNN:0;iRNA_PseU:0 20968 chr11 12308485 12308485 1 + G A rs79988719 12308484 + 12308464 12308504 41 TTGTGGGGACAGCAGTATGGTGTGAGGGAAGGAGAGAGTTC TTGTGGGGACAGCAGTATGGTATGAGGGAAGGAGAGAGTTC < 41bp 0.549512164330546 0.878595099966598 0.23436579 0.3615982 prediction 0.658165871272103 Functional Gain - MICALCL ENSG00000133808 UTR5 Human protein_coding chr11:12308484 chr11:12308485 . . 0 22 hPsi_associated_SNPs_27244 0 0 0 0 0 exosome 0.438734591509709 0.438736215502424 0 0 hPsi_site_20968 iPseU_CNN:0;iRNA_PseU:0 20969 chr4 100503127 100503127 1 + C A UCEC 100503126 + 100503106 100503146 41 CTCACGTACTCCACTGAAGTTCTTCTTGATCGGGGCAAAGG CTCACGTACTCCACTGAAGTTATTCTTGATCGGGGCAAAGG < 41bp 0.466416297871728 0.829081134774579 0.29703152 0.39681646 prediction 0.658162269549158 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100503126 chr4:100503127 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_27245 0 0 1 0 1 cytosol 0.438718610524093 0.438718560317487 0 0 hPsi_site_20969 iPseU_CNN:0;iRNA_PseU:0 20970 chr6 26468645 26468645 1 + G A BLCA 26468644 + 26468624 26468664 41 TTCAGCCTTTTCCGTGCCTGTGAGGCCCTTCTTCAGGTTGG TTCAGCCTTTTCCGTGCCTGTAAGGCCCTTCTTCAGGTTGG < 41bp 0.560228316281722 0.889309356588648 0.31584704 0.58146775 prediction 0.658162080613852 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468644 chr6:26468645 synonymous SNV . 0 22 hPsi_associated_SNPs_27246 0 0 1 0 0 Endoplasmic reticulum 0.438718592996559 0.438718589675099 0.1629355 0 hPsi_site_20970 iPseU_CNN:0.1629355;iRNA_PseU:0 20971 chr10 60556160 60556160 1 + C A COAD 60556159 + 60556139 60556179 41 ATGTATGAAGCAAGGAAATGTCTCCTCGGACTTGAAAGCAG ATGTATGAAGCAAGGAAATGTATCCTCGGACTTGAAAGCAG < 41bp 0.472465951002269 0.82907390513399 0.17545861 0.22823226 prediction 0.65814781026798 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60556159 chr10:60556160 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27247 0 0 1 0 1 nucleus 0.438718619428465 0.438718382867579 0 0 hPsi_site_20971 iPseU_CNN:0;iRNA_PseU:0 20972 chr2 102638706 102638706 1 + C A UCEC 102638705 + 102638685 102638725 41 CCCTCAAGACCATATCAGCTTCTCTGGGTAAGGCCCACAAG CCCTCAAGACCATATCAGCTTATCTGGGTAAGGCCCACAAG < 41bp 0.543384510402575 0.872457901488138 0.4055915 0.3969613 prediction 0.658146782171125 Functional Gain - IL1R2 ENSG00000115590 CDS Human protein_coding chr2:102638705 chr2:102638706 nonsynonymous SNV 0.420 4 22 hPsi_associated_SNPs_27248 0 0 0 0 2 Endoplasmic reticulum 0.438718551804968 0.438718596689436 0 0 hPsi_site_20972 iPseU_CNN:0;iRNA_PseU:0 20973 chr7 55273235 55273235 1 + C A UCEC 55273234 + 55273214 55273254 41 GGAAGCCAAGCCAAATGGCATCTTTAAGGGCTCCACAGCTG GGAAGCCAAGCCAAATGGCATATTTAAGGGCTCCACAGCTG < 41bp 0.525898807923836 0.854964232456467 0.56601685 0.4680514 prediction 0.658130849065261 Functional Gain - EGFR ENSG00000146648 CDS Human protein_coding chr7:55273234 chr7:55273235 synonymous SNV . 0 22 hPsi_associated_SNPs_27249 0 0 1 0 0 Nucleus 0.438718592995424 0.438718593017494 0 0 hPsi_site_20973 iPseU_CNN:0;iRNA_PseU:0 20974 chr9 129643095 129643095 1 + G A CESC 129643094 + 129643074 129643114 41 GAGTCCCCCGAGAGAACAGATGTGTACGTGGAACAGAAACT GAGTCCCCCGAGAGAACAGATATGTACGTGGAACAGAAACT < 41bp 0.563541988774656 0.892603079004858 0.20130235 0.27056128 prediction 0.658122180460405 Functional Gain - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129643094 chr9:129643095 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_27250 0 0 0 0 0 nucleoplasm 0.438769578637077 0.438725676930098 0 0 hPsi_site_20974 iPseU_CNN:0;iRNA_PseU:0 20975 chr7 143175351 143175351 1 + G A SKCM 143175350 + 143175330 143175370 41 TGAAGTGGAGGTTCCCAGGGTGGGTGCCCTGGCTCCTGTTG TGAAGTGGAGGTTCCCAGGGTAGGTGCCCTGGCTCCTGTTG < 41bp 0.562080348839015 0.891139482045357 0.61314654 0.88581514 prediction 0.658118266412684 Functional Gain - TAS2R41 ENSG00000221855 CDS Human protein_coding chr7:143175350 chr7:143175351 stopgain 0.021 0 22 hPsi_associated_SNPs_27251 0 0 0 0 0 exosome 0.438718592947235 0.438777982070999 0.5453372 0 hPsi_site_20975 iPseU_CNN:0.5453372;iRNA_PseU:0 20976 chr3 113514749 113514749 1 + C A UCEC 113514748 + 113514728 113514768 41 CTCCACCTGGTGGTGATTTTTCTGATCCAGTTACATCTGCC CTCCACCTGGTGGTGATTTTTATGATCCAGTTACATCTGCC < 41bp 0.479720896736719 0.829058916981902 0.40549538 0.6268163 prediction 0.658117833963803 Functional Gain - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113514748 chr3:113514749 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27252 0 0 1 0 1 Ribosome 0.438721651310539 0.438718746097951 0.2536326 0 hPsi_site_20976 iPseU_CNN:0.2536326;iRNA_PseU:0 20977 chr5 140865720 140865720 1 + C A UCEC 140865719 + 140865699 140865739 41 TGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACAT TGCGGGCTCGCGATGGGGGTTATCCAGCCATGGAGCAACAT < 41bp 0.527076515174166 0.85612652360396 0.32224226 0.6366937 prediction 0.658100016859588 Functional Gain - PCDHGC4 ENSG00000242419 CDS Human protein_coding chr5:140865719 chr5:140865720 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27253 0 0 0 0 0 exosome 0.438719786337066 0.438708876427085 0.2733874 0 hPsi_site_20977 iPseU_CNN:0.2733874;iRNA_PseU:0 20978 chr16 3070412 3070412 1 + C A LUAD 3070411 + 3070391 3070431 41 CGTGCACTATGGCTCGGGGCTCGCTGCGCCGGTTGCTGCGG CGTGCACTATGGCTCGGGGCTAGCTGCGCCGGTTGCTGCGG < 41bp 0.49854012183371 0.829047558622915 0.2853517 0.38059783 prediction 0.65809511724583 Functional Gain - TNFRSF12A ENSG00000006327 CDS Human protein_coding chr16:3070411 chr16:3070412 stopgain 0.004 0 22 hPsi_associated_SNPs_27254 0 0 1 0 1 Ribosome 0.447026487249518 0.438637727236138 0 0 hPsi_site_20978 iPseU_CNN:0;iRNA_PseU:0 20979 chr2 74906877 74906877 1 + G A CESC 74906876 + 74906856 74906896 41 GGATGGACTGGAGGTGGTGGTGACCCCAGGGGCCATGGGCG GGATGGACTGGAGGTGGTGGTAACCCCAGGGGCCATGGGCG < 41bp 0.410702815706215 0.829043469005488 0.22557995 0.72240996 prediction 0.658086938010976 Functional Gain - SEMA4F ENSG00000135622 CDS Human protein_coding chr2:74906876 chr2:74906877 synonymous SNV . 0 22 hPsi_associated_SNPs_27255 0 0 0 0 0 nucleus 0.438720039629407 0.438717828165431 0.44481992 0 hPsi_site_20979 iPseU_CNN:0.44481992;iRNA_PseU:0 20980 chr16 29979543 29979543 1 + G A BLCA 29979542 + 29979522 29979562 41 TGTGTTAGTGTCTGGAGCCATGAAGGCCTTGTGCTGACCAA TGTGTTAGTGTCTGGAGCCATAAAGGCCTTGTGCTGACCAA < 41bp 0.567749831220197 0.896791223169802 0.22606087 0.24989915 prediction 0.65808278389921 Functional Gain - TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29979542 chr16:29979543 nonsynonymous SNV 0.925 0 22 hPsi_associated_SNPs_27256 0 0 1 1 1 Cytosol 0.438577422569257 0.44238619657208 0 0 hPsi_site_20980 iPseU_CNN:0;iRNA_PseU:0 20981 chr6 33554563 33554563 1 + G T CESC 33554564 - 33554544 33554584 41 GGCCATCCACAATGCTCACCTCCACCACGGTGATCTCTGGC GGCCATCCACAATGCTCACCTACACCACGGTGATCTCTGGC < 41bp 0.511489731487699 0.840527526294278 0.3201121 0.5250187 prediction 0.658075589613157 Functional Gain - GGNBP1;LINC00336 ENSG00000204188 CDS Human transcribed_unitary_pseudogene chr6:33554564 chr6:33554563 stopgain . 0 22 hPsi_associated_SNPs_27257 0 0 0 8 0 unknown 0.438721255578287 0.438719997766148 0.0500373999999999 0 hPsi_site_20981 iPseU_CNN:0.0500373999999999;iRNA_PseU:0 20982 chr17 28887700 28887700 1 + G A ESCA 28887699 + 28887679 28887719 41 GGAAGGGGAACAGATGTTGATGCTGATAACAAGCATTGCCT GGAAGGGGAACAGATGTTGATACTGATAACAAGCATTGCCT < 41bp 0.570687015639236 0.899720193890288 0.17990565 0.22787896 prediction 0.658066356502103 Functional Gain - TBC1D29 ENSG00000266733 CDS Human protein_coding chr17:28887699 chr17:28887700 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_27258 0 0 1 0 2 exosome 0.438719347770955 0.438718043153357 0 0 hPsi_site_20982 iPseU_CNN:0;iRNA_PseU:0 20983 chr17 72246116 72246116 1 + C A LUAD 72246115 + 72246095 72246135 41 CGCACTTACCACCATGCAGATCCAGGTCGCGGGGCTGCTGC CGCACTTACCACCATGCAGATACAGGTCGCGGGGCTGCTGC < 41bp 0.454551033141716 0.829032788143711 0.3080507 0.64301634 prediction 0.658065576287422 Functional Gain - TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72246115 chr17:72246116 synonymous SNV . 0 22 hPsi_associated_SNPs_27259 0 0 1 0 2 Endoplasmic reticulum 0.43871922410322 0.552708658228073 0.28603268 0.105417316456146 hPsi_site_20983 iPseU_CNN:0.28603268;iRNA_PseU:0.105417316456146 20984 chr1 22927502 22927502 1 + C A LUAD 22927501 + 22927481 22927521 41 AAGGACCGGGCGCAGCGGCCTCGCTTCTCCCAGATTGTCAG AAGGACCGGGCGCAGCGGCCTAGCTTCTCCCAGATTGTCAG < 41bp 0.478523031417221 0.829028371122872 0.3109662 0.31565416 prediction 0.658056742245744 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22927501 chr1:22927502 nonsynonymous SNV 0.882 3 22 hPsi_associated_SNPs_27260 0 0 1 0 1 exosome 0.438718316944537 0.438718362111206 0 0 hPsi_site_20984 iPseU_CNN:0;iRNA_PseU:0 20985 chr1 32625035 32625035 1 + C A GBM 32625034 + 32625014 32625054 41 GGGCTCTAACGAATATTGCCTCTGGAACCTCTCAGCAGACC GGGCTCTAACGAATATTGCCTATGGAACCTCTCAGCAGACC < 41bp 0.463548757051654 0.829019203337845 0.3376309 0.48738757 prediction 0.658038406675689 Functional Gain - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32625034 chr1:32625035 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27261 0 0 1 0 2 Cytosol 0.438718592995877 0.438718592784267 0 0 hPsi_site_20985 iPseU_CNN:0;iRNA_PseU:0 20986 chr5 53815034 53815034 1 + G A UCEC 53815033 + 53815013 53815053 41 CTTAGCACGCCCCCCGCCGCTGCCCTTGACCTGCAGGAGGT CTTAGCACGCCCCCCGCCGCTACCCTTGACCTGCAGGAGGT < 41bp 0.4212896107044 0.829019078020573 0.30989483 0.6456026 prediction 0.658038156041146 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815033 chr5:53815034 nonsynonymous SNV 0.753 1 22 hPsi_associated_SNPs_27262 0 0 0 0 0 chromatin 0.438718592992559 0.438718592993103 0.2912052 0 hPsi_site_20986 iPseU_CNN:0.2912052;iRNA_PseU:0 20987 chr6 44119697 44119697 1 + C A STAD 44119696 + 44119676 44119716 41 AGGCCTGCTCATGTACATGATCCGGCTCTGCCTGGCGCGCT AGGCCTGCTCATGTACATGATACGGCTCTGCCTGGCGCGCT < 41bp 0.538164372893114 0.867181517558645 0.40450418 0.794791 prediction 0.658034289331063 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44119696 chr6:44119697 synonymous SNV . 0 22 hPsi_associated_SNPs_27263 0 0 1 0 1 Ribosome 0.438835711158329 0.438590600717698 0.589582 0 hPsi_site_20987 iPseU_CNN:0.589582;iRNA_PseU:0 20988 chr12 21679853 21679853 1 + C A GBM 21679852 + 21679832 21679872 41 CTGGCAGCAACAACCTTGGCTCTTTTCCTGGTGTTTGTTTT CTGGCAGCAACAACCTTGGCTATTTTCCTGGTGTTTGTTTT < 41bp 0.473320976174305 0.829017139462436 0.41989398 0.48522305 prediction 0.658034278924872 Functional Gain - SPX ENSG00000134548 CDS Human protein_coding chr12:21679852 chr12:21679853 nonsynonymous SNV 0.377 0 22 hPsi_associated_SNPs_27264 0 0 0 0 2 exosome 0.436807497000257 0.438718128487202 0 0 hPsi_site_20988 iPseU_CNN:0;iRNA_PseU:0 20989 chr11 85988171 85988171 1 + C A LUSC 85988170 + 85988150 85988190 41 CATGAGGTTTTCTATGGATTTCTGGCAAAAGGTATCAACAT CATGAGGTTTTCTATGGATTTATGGCAAAAGGTATCAACAT < 41bp 0.477029888646234 0.829014204764099 0.2549846 0.32579452 prediction 0.658028409528199 Functional Gain - EED ENSG00000074266 CDS Human protein_coding chr11:85988170 chr11:85988171 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27265 0 0 1 2 0 Ribosome 0.4387063543838 0.438224588101786 0 0 hPsi_site_20989 iPseU_CNN:0;iRNA_PseU:0 20990 chr19 54501518 54501518 1 + C A COAD 54501517 + 54501497 54501537 41 AAACTGCACCTATTTTAAATTCTTCACCACGGGGGAGAATG AAACTGCACCTATTTTAAATTATTCACCACGGGGGAGAATG < 41bp 0.476476134562964 0.829008268618269 0.25487357 0.36161426 prediction 0.658016537236537 Functional Gain - CACNG6 ENSG00000130433 CDS Human protein_coding chr19:54501517 chr19:54501518 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27266 0 0 0 0 2 exosome 0.438718820800886 0.438718598005469 0 0 hPsi_site_20990 iPseU_CNN:0;iRNA_PseU:0 20991 chr6 139487523 139487523 1 + G A UCEC 139487522 + 139487502 139487542 41 GCAACAACGAGCACTGCCCCTGCAGCACCTGGATGCACCTG GCAACAACGAGCACTGCCCCTACAGCACCTGGATGCACCTG < 41bp 0.416052499605235 0.829007399042087 0.21303043 0.52503216 prediction 0.658014798084175 Functional Gain - HECA ENSG00000112406 CDS Human protein_coding chr6:139487522 chr6:139487523 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27267 0 0 1 0 0 Ribosome 0.438845675674782 0.439032498221093 0.0500643199999999 0 hPsi_site_20991 iPseU_CNN:0.0500643199999999;iRNA_PseU:0 20992 chr13 115007695 115007695 1 + G A COAD 115007694 + 115007674 115007714 41 AAAGAAGCTTTGAAGCTTGATGTCTACTGTTTTGAAGCGTT AAAGAAGCTTTGAAGCTTGATATCTACTGTTTTGAAGCGTT < 41bp 0.421822197863827 0.829004948408451 0.2668367 0.42991424 prediction 0.658009896816902 Functional Gain - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115007694 chr13:115007695 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_27268 0 0 1 0 2 Ribosome 0.438575951850696 0.438716623311711 0 0 hPsi_site_20992 iPseU_CNN:0;iRNA_PseU:0 20993 chr11 35685261 35685261 1 + G A UCEC 35685260 + 35685240 35685280 41 GGCAGCTCATCTGTGTCCTGTGTCCAGTCATTGGGGCTCAC GGCAGCTCATCTGTGTCCTGTATCCAGTCATTGGGGCTCAC < 41bp 0.562563422034436 0.891563588296469 0.36011142 0.5208629 prediction 0.658000332524065 Functional Gain - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35685260 chr11:35685261 nonsynonymous SNV 0.488 5 22 hPsi_associated_SNPs_27269 0 0 1 0 0 Ribosome 0.438763058731065 0.438744688203152 0.0417258 0 hPsi_site_20993 iPseU_CNN:0.0417258;iRNA_PseU:0 20994 chr20 44682237 44682237 1 + G A LUSC 44682236 + 44682216 44682256 41 GGTCTGGCGGAAGTGCAAGATGCGTATCTTCACTGTGGCCC GGTCTGGCGGAAGTGCAAGATACGTATCTTCACTGTGGCCC < 41bp 0.409373978513238 0.828996743416705 0.3245531 0.7253406 prediction 0.65799348683341 Functional Gain - SLC12A5 ENSG00000124140 CDS Human protein_coding chr20:44682236 chr20:44682237 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_27270 0 0 0 0 1 cytosol 0.438164734157334 0.43971333099266 0.4506812 0 hPsi_site_20994 iPseU_CNN:0.4506812;iRNA_PseU:0 20995 chr4 145627780 145627780 1 + G A SKCM 145627779 + 145627759 145627799 41 ATACCACCAACCAAGAACGGTGGGCTATCGGGCCTCATGAC ATACCACCAACCAAGAACGGTAGGCTATCGGGCCTCATGAC < 41bp 0.414421580394569 0.828992287045176 0.3561927 0.7392597 prediction 0.657984574090352 Functional Gain - HHIP ENSG00000164161 CDS Human protein_coding chr4:145627779 chr4:145627780 stopgain 1.000 1 22 hPsi_associated_SNPs_27271 0 0 0 0 2 cytosol 0.438718600928795 0.43871863852739 0.4785194 0 hPsi_site_20995 iPseU_CNN:0.4785194;iRNA_PseU:0 20996 chr19 42224988 42224988 1 + C A COAD 42224987 + 42224967 42225007 41 CCGCAGCAACACACACAAGTTCTCTTTATCGCCAAAATCAC CCGCAGCAACACACACAAGTTATCTTTATCGCCAAAATCAC < 41bp 0.53311998429759 0.862107229158813 0.43626875 0.65417194 prediction 0.657974489722446 Functional Gain - CEACAM5 ENSG00000105388 CDS Human protein_coding chr19:42224987 chr19:42224988 nonsynonymous SNV 0.222 3 22 hPsi_associated_SNPs_27272 0 0 0 0 0 Cytosol 0.438728114638928 0.438702570015978 0.30834388 0 hPsi_site_20996 iPseU_CNN:0.30834388;iRNA_PseU:0 20997 chr19 7600857 7600857 1 + G A rs35732838 7600856 + 7600836 7600876 41 CGGGGCCGGAGTGGCGGTGGTGGTCACGGCCGTGCTCATCC CGGGGCCGGAGTGGCGGTGGTAGTCACGGCCGTGCTCATCC < 41bp 0.565676461076059 0.894661232880674 0.29988176 0.7743551 prediction 0.657969543609231 Functional Gain - PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7600856 chr19:7600857 synonymous SNV . 0 22 hPsi_associated_SNPs_27273 3 0 1 0 2 Ribosome 0.404471639687115 0.43872121529941 0.5487102 0 hPsi_site_20997 iPseU_CNN:0.5487102;iRNA_PseU:0 20998 chr8 99140662 99140662 1 + C A rs3824145 99140661 + 99140641 99140681 41 AAGCTGTGACCCAGAAGTCTTCGAATTCACTGGTTTTTCAG AAGCTGTGACCCAGAAGTCTTAGAATTCACTGGTTTTTCAG < 41bp 0.46692982079648 0.828982562300956 0.23420557 0.36623663 prediction 0.657965124601913 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99140661 chr8:99140662 stopgain 0.995 1 22 hPsi_associated_SNPs_27274 0 0 0 0 1 Mitochondrion 0.438718491816614 0.438718581267835 0 0 hPsi_site_20998 iPseU_CNN:0;iRNA_PseU:0 20999 chr20 32336809 32336809 1 + G A rs146485548 32336808 + 32336788 32336828 41 CATCTTGGTGAGCGATGATGTGCTCATGTCTGCCATGTCAG CATCTTGGTGAGCGATGATGTACTCATGTCTGCCATGTCAG < 41bp 0.401744633162443 0.828977406296997 0.37288722 0.76736516 prediction 0.657954812593994 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32336808 chr20:32336809 synonymous SNV . 0 22 hPsi_associated_SNPs_27275 0 0 0 1 2 chromatin 0.43957657101309 0.461101765605206 0.53473032 0 hPsi_site_20999 iPseU_CNN:0.53473032;iRNA_PseU:0 21000 chr11 111753227 111753227 1 + G A LUSC 111753226 + 111753206 111753246 41 GGATGGCGATGCACCACTAATGAGAATACCTATTCAAACCG GGATGGCGATGCACCACTAATAAGAATACCTATTCAAACCG < 41bp 0.428852730259871 0.828977361001953 0.21114793 0.24784473 prediction 0.657954722003905 Functional Gain - C11orf1 ENSG00000137720 CDS Human protein_coding chr11:111753226 chr11:111753227 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27276 0 0 1 0 1 Cytosol 0.43871945543807 0.438726732151581 0 0 hPsi_site_21000 iPseU_CNN:0;iRNA_PseU:0 21001 chr17 37901726 37901726 1 + G T LUSC 37901725 + 37901705 37901745 41 ATGGACTTCTCTGGCCATGCTGGGCGTGTCATTGAGAACCC ATGGACTTCTCTGGCCATGCTTGGCGTGTCATTGAGAACCC < 41bp 0.496277261210869 0.828977317525059 0.19708392 0.25564373 prediction 0.657954635050117 Functional Gain - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37901725 chr17:37901726 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_27277 0 0 1 0 1 Cytosol 0.438718591293774 0.438718598052521 0 0 hPsi_site_21001 iPseU_CNN:0;iRNA_PseU:0 21002 chr4 122722582 122722582 1 + G A KIRP 122722581 + 122722561 122722601 41 GGGCCGGTGACCCAACACCATGAAGGAAACGCCACTCTCAA GGGCCGGTGACCCAACACCATAAAGGAAACGCCACTCTCAA < 41bp 0.442636251023425 0.828971594674004 0.13576514 0.26894844 prediction 0.657943189348008 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122722581 chr4:122722582 nonsynonymous SNV 0.936 4 22 hPsi_associated_SNPs_27278 0 0 1 0 1 Nucleus 0.438719802644987 0.438719005076855 0 0 hPsi_site_21002 iPseU_CNN:0;iRNA_PseU:0 21003 chr5 78610405 78610405 1 + C A CESC 78610404 + 78610384 78610424 41 ATAACAACCTCGAACCATGTTCTGTTACCATAAATCCACTC ATAACAACCTCGAACCATGTTATGTTACCATAAATCCACTC < 41bp 0.531069148669814 0.860038149970563 0.5270762 0.4436883 prediction 0.657938002601498 Functional Gain - JMY ENSG00000152409 CDS Human protein_coding chr5:78610404 chr5:78610405 nonsynonymous SNV 0.920 2 22 hPsi_associated_SNPs_27279 0 0 1 0 0 Endoplasmic reticulum 0.439462450216297 0.438781020581104 0 0 hPsi_site_21003 iPseU_CNN:0;iRNA_PseU:0 21004 chr8 86121503 86121503 1 + G A SKCM 86121502 + 86121482 86121522 41 TTTCCTGTTCCCCCACCTGATGACCTCACACAGCCTTCCTC TTTCCTGTTCCCCCACCTGATAACCTCACACAGCCTTCCTC < 41bp 0.40677670798575 0.828968224586062 0.26344192 0.48561063 prediction 0.657936449172125 Functional Gain - E2F5 ENSG00000133740 CDS Human protein_coding chr8:86121502 chr8:86121503 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27280 0 0 1 0 0 Cytosol 0.438673425750254 0.438718590406037 0 0 hPsi_site_21004 iPseU_CNN:0;iRNA_PseU:0 21005 chr19 49422352 49422352 1 + G A LGG 49422351 + 49422331 49422371 41 GGAGATGGAGGAGGAGCGACTGCGCATGCGGGAGCATGTGA GGAGATGGAGGAGGAGCGACTACGCATGCGGGAGCATGTGA < 41bp 0.413214996034086 0.82896462831224 0.19864148 0.4946769 prediction 0.65792925662448 Functional Gain - NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49422351 chr19:49422352 synonymous SNV . 0 22 hPsi_associated_SNPs_27281 0 0 1 0 2 Ribosome 0.438702332026652 0.438706415165628 0 0 hPsi_site_21005 iPseU_CNN:0;iRNA_PseU:0 21006 chr20 44470575 44470575 1 + G A rs148674138 44470574 + 44470554 44470594 41 CCTGACGCCACAGCCGCCCATGGACCAGCCCCCGAGAGCCA CCTGACGCCACAGCCGCCCATAGACCAGCCCCCGAGAGCCA < 41bp 0.568550883344428 0.897513835199844 0.22222656 0.32030576 prediction 0.65792590371083 Functional Gain - ACOT8 ENSG00000101473 CDS Human protein_coding chr20:44470574 chr20:44470575 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_27282 0 0 0 0 0 Cytosol 0.438762686201116 0.466156853123831 0 0 hPsi_site_21006 iPseU_CNN:0;iRNA_PseU:0 21007 chr11 55563892 55563892 1 + G A SKCM 55563891 + 55563871 55563911 41 CACAGTTGTCAACCCCATGCTGAACCCTCTGATCTACAGCC CACAGTTGTCAACCCCATGCTAAACCCTCTGATCTACAGCC < 41bp 0.448633127249959 0.828962409069779 0.48489165 0.68989533 prediction 0.657924818139558 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563891 chr11:55563892 synonymous SNV . 0 22 hPsi_associated_SNPs_27283 0 0 0 0 0 unknown 0.438720400168972 0.438722759882069 0.37979066 0 hPsi_site_21007 iPseU_CNN:0.37979066;iRNA_PseU:0 21008 chr1 12268721 12268721 1 + G A rs5746074 12268720 + 12268700 12268740 41 TAAAGGAGAAGGCATGAAATTGTCTAGCAGAGCAGGGGCAG TAAAGGAGAAGGCATGAAATTATCTAGCAGAGCAGGGGCAG < 41bp 0.478531438271754 0.828957172421424 0.25763938 0.35937917 prediction 0.657914344842848 Functional Gain - TNFRSF1B ENSG00000028137 UTR3 Human protein_coding chr1:12268720 chr1:12268721 . . 0 22 hPsi_associated_SNPs_27284 0 0 1 0 0 Ribosome 0.438719275675816 0.438718594698782 0 0 hPsi_site_21008 iPseU_CNN:0;iRNA_PseU:0 21009 chr22 50923420 50923420 1 + G A rs150452039 50923419 + 50923399 50923439 41 GACCAGCCTGGCCAACATGGTGAAATCCCGTCTCTACTAAA GACCAGCCTGGCCAACATGGTAAAATCCCGTCTCTACTAAA < 41bp 0.480601712834032 0.828954446143732 0.35218483 0.78013074 prediction 0.657908892287463 Functional Gain - ADM2 ENSG00000128165 UTR3 Human protein_coding chr22:50923419 chr22:50923420 . . 0 22 hPsi_associated_SNPs_27285 0 0 0 0 0 nucleolus 0.438681143487444 0.438718556676723 0.56026148 0 hPsi_site_21009 iPseU_CNN:0.56026148;iRNA_PseU:0 21010 chr3 122003508 122003508 1 + G A SKCM 122003507 + 122003487 122003527 41 CGCAAGCGGTCCAGCAGCCTTGGAGGCTCCACGGGATCCAC CGCAAGCGGTCCAGCAGCCTTAGAGGCTCCACGGGATCCAC < 41bp 0.421565809519201 0.828953191548844 0.31055385 0.4388325 prediction 0.657906383097688 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:122003507 chr3:122003508 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_27286 0 0 0 0 0 exosome 0.43871955274873 0.43871541882011 0 0 hPsi_site_21010 iPseU_CNN:0;iRNA_PseU:0 21011 chr3 43095098 43095098 1 + G A UCEC 43095097 + 43095077 43095117 41 AAGAGAGGCTCCGAGAGAAATGCCAGAACCCAGCCGAGCTG AAGAGAGGCTCCGAGAGAAATACCAGAACCCAGCCGAGCTG < 41bp 0.41143729921109 0.828946400401737 0.3026725 0.5414806 prediction 0.657892800803475 Functional Gain - FAM198A ENSG00000144649 CDS Human protein_coding chr3:43095097 chr3:43095098 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_27287 0 0 0 0 2 exosome 0.438721017602859 0.438718631459377 0.0829612 0 hPsi_site_21011 iPseU_CNN:0.0829612;iRNA_PseU:0 21012 chr14 94394620 94394620 1 + G A SKCM 94394619 + 94394599 94394639 41 TCATGGAAAGCCTCGTGCAGTGGCCCCCTGGTGATGGCATC TCATGGAAAGCCTCGTGCAGTAGCCCCCTGGTGATGGCATC < 41bp 0.42393363343312 0.828945588022018 0.22758147 0.35192317 prediction 0.657891176044036 Functional Gain - FAM181A ENSG00000140067 CDS Human protein_coding chr14:94394619 chr14:94394620 nonsynonymous SNV 0.856 0 22 hPsi_associated_SNPs_27288 0 0 0 0 1 exosome 0.438718593720345 0.4387185929932 0 0 hPsi_site_21012 iPseU_CNN:0;iRNA_PseU:0 21013 chr17 904376 904376 1 + G A rs143573501 904375 + 904355 904395 41 TGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTC TGCCAGCCCCGGATCCGGGCTACTCTCTGGAGGACAGTTTC < 41bp 0.444525959723438 0.828945213188273 0.35795945 0.7552614 prediction 0.657890426376547 Functional Gain - TIMM22 ENSG00000177370 UTR3 Human protein_coding chr17:904375 chr17:904376 . . 0 22 hPsi_associated_SNPs_27289 0 0 1 0 0 Cytosol 0.438724324413434 0.438750372189091 0.5105228 0 hPsi_site_21013 iPseU_CNN:0.5105228;iRNA_PseU:0 21014 chr10 106118308 106118308 1 + G A SKCM 106118307 + 106118287 106118327 41 GCTAAATGCAGAGATTGTAGTGAATTCTGCGAAGGTCGCCA GCTAAATGCAGAGATTGTAGTAAATTCTGCGAAGGTCGCCA < 41bp 0.420881135131263 0.828937369478734 0.31548408 0.36153007 prediction 0.657874738957468 Functional Gain - CFAP58 ENSG00000120051 CDS Human protein_coding chr10:106118307 chr10:106118308 synonymous SNV . 0 22 hPsi_associated_SNPs_27290 0 0 0 0 1 nucleolus 0.438719639050114 0.438642087159357 0 0 hPsi_site_21014 iPseU_CNN:0;iRNA_PseU:0 21015 chr17 80196953 80196953 1 + G A rs551936397 80196952 + 80196932 80196972 41 GGCTCAGGCAGGGCCACGGCTGGGCTCCAGCTGCCGGCCCA GGCTCAGGCAGGGCCACGGCTAGGCTCCAGCTGCCGGCCCA < 41bp 0.557983784480951 0.886920793774945 0.3059373 0.78530747 prediction 0.657874018587989 Functional Gain - SLC16A3 ENSG00000141526;ENSG00000141551 UTR3 Human other chr17:80196952 chr17:80196953 . . 0 22 hPsi_associated_SNPs_27291 0 0 1 0 0 Ribosome 0.453203202086239 0.438697753692911 0.57061494 0 hPsi_site_21015 iPseU_CNN:0.57061494;iRNA_PseU:0 21016 chrX 150349904 150349904 1 + G A UCEC 150349903 + 150349883 150349923 41 GATGATCCTGATGAAATGGCTGTGTGAAAAATGCTCTCGTA GATGATCCTGATGAAATGGCTATGTGAAAAATGCTCTCGTA < 41bp 0.453184072569145 0.828934769042746 0.30352113 0.3551869 prediction 0.657869538085492 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150349903 chrX:150349904 nonsynonymous SNV 0.478 0 22 hPsi_associated_SNPs_27292 0 0 1 0 0 exosome 0.438733638122719 0.438713331926606 0 0 hPsi_site_21016 iPseU_CNN:0;iRNA_PseU:0 21017 chr11 94277440 94277440 1 + G A THCA 94277439 + 94277419 94277459 41 TGGAAGAAAGGGACGGGCGGTGCCCGGTTGGGCGTCCTGGC TGGAAGAAAGGGACGGGCGGTACCCGGTTGGGCGTCCTGGC < 41bp 0.549227532892958 0.878160694241951 0.3411283 0.80320936 prediction 0.657866322697987 Functional Gain - FUT4 ENSG00000196371 CDS Human protein_coding chr11:94277439 chr11:94277440 synonymous SNV . 0 22 hPsi_associated_SNPs_27293 0 0 0 0 0 Endoplasmic reticulum 0.438718693249982 0.438722459269553 0.60641872 0 hPsi_site_21017 iPseU_CNN:0.60641872;iRNA_PseU:0 21018 chr16 67685316 67685316 1 + C A UCEC 67685315 + 67685295 67685335 41 GGCCCTCAGATTCTCCCCATTCTATATGAAGCTGGAAGCTC GGCCCTCAGATTCTCCCCATTATATATGAAGCTGGAAGCTC < 41bp 0.533142170946391 0.862067560427307 0.2283346 0.3007456 prediction 0.657850778961832 Functional Gain - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67685315 chr16:67685316 nonsynonymous SNV 0.976 4 22 hPsi_associated_SNPs_27294 0 0 0 0 2 chromatin 0.438718702387747 0.438718593009069 0 0 hPsi_site_21018 iPseU_CNN:0;iRNA_PseU:0 21019 chr6 43008716 43008716 1 + C T COAD 43008717 - 43008697 43008737 41 GGCTGGCACAGCTGCAGCAATGCCTGCAAGCTGTCCTGATT GGCTGGCACAGCTGCAGCAATACCTGCAAGCTGTCCTGATT < 41bp 0.57239496544956 0.901317147934609 0.24062908 0.54336166 prediction 0.657844364970098 Functional Gain - CUL7 ENSG00000044090 CDS Human protein_coding chr6:43008717 chr6:43008716 nonsynonymous SNV 0.740 1 22 hPsi_associated_SNPs_27295 0 0 1 0 2 Cytosol 0.441302289885966 0.441071574844165 0.0867233199999999 0 hPsi_site_21019 iPseU_CNN:0.0867233199999999;iRNA_PseU:0 21020 chr16 2284258 2284258 1 + G A SKCM 2284257 + 2284237 2284277 41 CACCAGGAGGTGCACGTGCGTGAGCGCCGCTTCCGCTGTGG CACCAGGAGGTGCACGTGCGTAAGCGCCGCTTCCGCTGTGG < 41bp 0.568260397827809 0.897174825184266 0.51143825 0.9075675 prediction 0.657828854712914 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284257 chr16:2284258 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27296 0 0 1 0 1 chromatin 0.43800567024872 0.438127822368231 0.7922585 0 hPsi_site_21020 iPseU_CNN:0.7922585;iRNA_PseU:0 21021 chr7 143771552 143771552 1 + G A GBM 143771551 + 143771531 143771571 41 TTGCAGCACGGTGCCCCAGATGCTGGTGAACCTCCTGCATC TTGCAGCACGGTGCCCCAGATACTGGTGAACCTCCTGCATC < 41bp 0.560070093042232 0.888984249294217 0.33370662 0.647785 prediction 0.657828312503969 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771551 chr7:143771552 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27297 0 0 0 0 0 unknown 0.440913973274025 0.43720592810351 0.29557 0 hPsi_site_21021 iPseU_CNN:0.29557;iRNA_PseU:0 21022 chr15 99901571 99901571 1 + G A LUSC 99901570 + 99901550 99901590 41 TCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCAT TCCCATTCAAGTTTCCGAGGTAAAGCTGCTTTCCTTTTCAT < 41bp 0.422126457324502 0.828914018695037 0.27044773 0.7300424 prediction 0.657828037390074 Functional Gain - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99901570 chr15:99901571 synonymous SNV . 0 22 hPsi_associated_SNPs_27298 0 0 1 0 1 Cytosol 0.43871895828854 0.438718592717556 0.4600848 0 hPsi_site_21022 iPseU_CNN:0.4600848;iRNA_PseU:0 21023 chr17 4060231 4060231 1 + G A UCEC 4060230 + 4060210 4060250 41 CAGGTGCTAAGGAGCCCCGCTGCGTGTGTGTGAGAACCACC CAGGTGCTAAGGAGCCCCGCTACGTGTGTGTGAGAACCACC < 41bp 0.565443067634587 0.894357063832238 0.2964363 0.7519714 prediction 0.657827992395302 Functional Gain - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4060230 chr17:4060231 nonsynonymous SNV 0.994 5 22 hPsi_associated_SNPs_27299 0 0 0 0 1 Ribosome 0.438735951222744 0.438558580161661 0.5039428 0 hPsi_site_21023 iPseU_CNN:0.5039428;iRNA_PseU:0 21024 chr10 25312947 25312947 1 + C A GBM 25312946 + 25312926 25312966 41 GTTGGCTTCTGATGGTGGCCTCTTTGTTCCTGCAAAGGAGT GTTGGCTTCTGATGGTGGCCTATTTGTTCCTGCAAAGGAGT < 41bp 0.47906747792686 0.828909956527854 0.27179945 0.33523458 prediction 0.657819913055708 Functional Gain - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25312946 chr10:25312947 synonymous SNV . 0 22 hPsi_associated_SNPs_27300 0 0 0 0 0 Cytosol 0.43868299841194 0.438718593926582 0 0 hPsi_site_21024 iPseU_CNN:0;iRNA_PseU:0 21025 chr16 56996944 56996944 1 + G A COAD 56996943 + 56996923 56996963 41 GAACCACGAGACTGCCAAGGTGATCCAGACCGCCTTCCAGC GAACCACGAGACTGCCAAGGTAATCCAGACCGCCTTCCAGC < 41bp 0.406666577326887 0.828905228697739 0.25471595 0.5295637 prediction 0.657810457395478 Functional Gain - CETP ENSG00000087237 CDS Human protein_coding chr16:56996943 chr16:56996944 synonymous SNV . 0 22 hPsi_associated_SNPs_27301 0 0 0 0 2 exosome 0.438790360433193 0.438720403627086 0.0591273999999999 0 hPsi_site_21025 iPseU_CNN:0.0591273999999999;iRNA_PseU:0 21026 chr11 7669672 7669672 1 + G T SARC 7669671 + 7669651 7669691 41 AGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTC AGAGCGTGTGTGTGCATGGCTTGAGGACTTTGGCCTGGCTC < 41bp 0.500823907520241 0.829714441805109 0.23980677 0.37896478 prediction 0.657781068569736 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7669671 chr11:7669672 synonymous SNV . 0 22 hPsi_associated_SNPs_27302 0 0 1 0 2 Cytosol 0.438475083058237 0.438805354129071 0 0 hPsi_site_21026 iPseU_CNN:0;iRNA_PseU:0 21027 chr14 24108204 24108204 1 + C A LUSC 24108203 + 24108183 24108223 41 GGGTAGCCGTGGTCACGGGGTCCACCAGTGGGTGAGTGCTG GGGTAGCCGTGGTCACGGGGTACACCAGTGGGTGAGTGCTG < 41bp 0.53530761399318 0.864195115897597 0.31099862 0.73158765 prediction 0.657775003808833 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108203 chr14:24108204 nonsynonymous SNV 0.014 4 22 hPsi_associated_SNPs_27303 0 0 1 0 1 Ribosome 0.424570912049801 0.435350398962307 0.4631753 0 hPsi_site_21027 iPseU_CNN:0.4631753;iRNA_PseU:0 21028 chrX 69717042 69717042 1 + C A BRCA 69717041 + 69717021 69717061 41 GGCTTGCAGAGGGAGTGACATCCAACACCAGTGACAGCGAA GGCTTGCAGAGGGAGTGACATACAACACCAGTGACAGCGAA < 41bp 0.51622181523341 0.845105952433529 0.30211443 0.42738718 prediction 0.657768274400238 Functional Gain - DLG3 ENSG00000082458 CDS Human protein_coding chrX:69717041 chrX:69717042 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27304 0 0 1 0 2 Ribosome 0.438704569652141 0.438742823388028 0 0 hPsi_site_21028 iPseU_CNN:0;iRNA_PseU:0 21029 chr17 33495335 33495335 1 + C A BLCA 33495334 + 33495314 33495354 41 AGTGTCACTGCTCAAACAGATCTACAAGACCACCAAAAATG AGTGTCACTGCTCAAACAGATATACAAGACCACCAAAAATG < 41bp 0.463237695231368 0.828882562216618 0.48290157 0.75024486 prediction 0.657765124433237 Functional Gain - UNC45B ENSG00000141161 CDS Human protein_coding chr17:33495334 chr17:33495335 synonymous SNV . 0 22 hPsi_associated_SNPs_27305 0 0 0 0 1 Nucleus 0.438743396415392 0.448212267338459 0.50048972 0 hPsi_site_21029 iPseU_CNN:0.50048972;iRNA_PseU:0 21030 chr2 176973665 176973665 1 + G A PCPG 176973664 + 176973644 176973684 41 AGCGGTCCCGGAAAAAGCGCTGTCCCTATACCAAGTACCAG AGCGGTCCCGGAAAAAGCGCTATCCCTATACCAAGTACCAG < 41bp 0.56197025233886 0.890845177762847 0.28654552 0.6233726 prediction 0.657749850847974 Functional Gain - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973664 chr2:176973665 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27306 0 0 1 0 1 exosome 0.438718582166324 0.438718596634271 0.2467452 0 hPsi_site_21030 iPseU_CNN:0.2467452;iRNA_PseU:0 21031 chr1 1267896 1267896 1 + G A LUSC 1267895 + 1267875 1267915 41 CTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCC CTTGGCTTCCTCCAGAGGGGTACCCAGCTGCACGAGTTCCC < 41bp 0.418702140771647 0.828874361176204 0.22394148 0.596294 prediction 0.657748722352408 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1267895 chr1:1267896 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27307 0 0 0 0 0 chromatin 0.438722560937301 0.438718220642312 0.192588 0 hPsi_site_21031 iPseU_CNN:0.192588;iRNA_PseU:0 21032 chr17 48605618 48605618 1 + G A COAD 48605617 + 48605597 48605637 41 GGAGACCATCTATTTGAATGTGCCTGAAGAGCAAGGTCAGA GGAGACCATCTATTTGAATGTACCTGAAGAGCAAGGTCAGA < 41bp 0.418915090583518 0.82886802213381 0.22989795 0.71415734 prediction 0.657736044267619 Functional Gain - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48605617 chr17:48605618 synonymous SNV . 0 22 hPsi_associated_SNPs_27308 0 0 0 4 1 exosome 0.438734051568784 0.438790459590162 0.42831468 0 hPsi_site_21032 iPseU_CNN:0.42831468;iRNA_PseU:0 21033 chr11 6292011 6292011 1 + C A LUAD 6292010 + 6291990 6292030 41 CAGCGACAGCCAAAGCAGGGTCCGAAACCAAGGCGGGCTGC CAGCGACAGCCAAAGCAGGGTACGAAACCAAGGCGGGCTGC < 41bp 0.541594375314646 0.870461767942678 0.20681259 0.66673476 prediction 0.657734785256065 Functional Gain - CCKBR ENSG00000110148 CDS Human protein_coding chr11:6292010 chr11:6292011 synonymous SNV . 0 22 hPsi_associated_SNPs_27309 0 0 0 0 2 unknown 0.438718592995102 0.438718592993632 0.33346952 0 hPsi_site_21033 iPseU_CNN:0.33346952;iRNA_PseU:0 21034 chr9 72879304 72879304 1 + G A rs12005618 72879303 + 72879283 72879323 41 AACAGGGAAGTCGAGCATTGTGTGTGCCATTTGCCTTGGTT AACAGGGAAGTCGAGCATTGTATGTGCCATTTGCCTTGGTT < 41bp 0.426918363025366 0.828866539397244 0.285713 0.40692565 prediction 0.657733078794488 Functional Gain - SMC5 ENSG00000198887 CDS Human protein_coding chr9:72879303 chr9:72879304 synonymous SNV . 0 22 hPsi_associated_SNPs_27310 0 0 1 0 2 Cytosol 0.438819543829351 0.438751276002402 0 0 hPsi_site_21034 iPseU_CNN:0;iRNA_PseU:0 21035 chr1 152883842 152883842 1 + G A SKCM 152883841 + 152883821 152883861 41 GGACGGACAACTAAAACATCTGGAGCAGCAGGAGGGGCAGC GGACGGACAACTAAAACATCTAGAGCAGCAGGAGGGGCAGC < 41bp 0.439884370567088 0.82886293133169 0.292906 0.33946407 prediction 0.657725862663381 Functional Gain - IVL ENSG00000163207 CDS Human protein_coding chr1:152883841 chr1:152883842 synonymous SNV . 0 22 hPsi_associated_SNPs_27311 0 0 0 0 0 unknown 0.438718593020621 0.43871858916706 0 0 hPsi_site_21035 iPseU_CNN:0;iRNA_PseU:0 21036 chr12 104495794 104495794 1 + C A UCEC 104495793 + 104495773 104495813 41 AGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATA AGCTTGCTTAAGAAACAAGATATTGTTCCAGGCACAGGATA < 41bp 0.478348466922838 0.828858371270921 0.3675484 0.37111986 prediction 0.657716742541842 Functional Gain - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104495793 chr12:104495794 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27312 0 0 1 0 1 Cytosol 0.439057508513589 0.438614427176269 0 0 hPsi_site_21036 iPseU_CNN:0;iRNA_PseU:0 21037 chr2 233028250 233028250 1 + C A UCEC 233028249 + 233028229 233028269 41 AACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAAG AACAGAGTATGGCGTGGATTTATCTGATTTCTCTTCAGAAG < 41bp 0.479774424560755 0.828852385238321 0.319611 0.66013193 prediction 0.657704770476642 Functional Gain - DIS3L2 ENSG00000144535 CDS Human protein_coding chr2:233028249 chr2:233028250 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_27313 0 0 1 2 2 chromatin 0.438718982728436 0.438763168555831 0.32026386 0 hPsi_site_21037 iPseU_CNN:0.32026386;iRNA_PseU:0 21038 chr6 35438405 35438405 1 + G A PRAD 35438404 + 35438384 35438424 41 CACGTGAAGATGACAGACGATGAGCTTGTGTATAACATTCA CACGTGAAGATGACAGACGATAAGCTTGTGTATAACATTCA < 41bp 0.567986733938799 0.896831620631533 0.24150091 0.2774678 prediction 0.657689773385467 Functional Gain - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438404 chr6:35438405 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_27314 0 0 1 0 1 Cytosol 0.440202726707176 0.438546107098848 0 0 hPsi_site_21038 iPseU_CNN:0;iRNA_PseU:0 21039 chr5 148747833 148747833 1 + C A GBM 148747832 + 148747812 148747852 41 TACCACAGATTTCCCCAGCTTCTTCTGCACTCTGGACAACA TACCACAGATTTCCCCAGCTTATTCTGCACTCTGGACAACA < 41bp 0.524723706380228 0.85356232397889 0.3547265 0.55384845 prediction 0.657677235197325 Functional Gain - PCYOX1L ENSG00000145882 CDS Human protein_coding chr5:148747832 chr5:148747833 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_27315 0 0 1 0 0 Ribosome 0.438718592995105 0.438718593006855 0.1076969 0 hPsi_site_21039 iPseU_CNN:0.1076969;iRNA_PseU:0 21040 chr16 89300436 89300436 1 + G A rs145687934 89300435 + 89300415 89300455 41 TGTGAAAACCCTGTGGCCTCTGCCTCCCCTGGCTCTGACTT TGTGAAAACCCTGTGGCCTCTACCTCCCCTGGCTCTGACTT < 41bp 0.552039636826595 0.88087671323433 0.23113817 0.481026 prediction 0.657674152815471 Functional Gain - ZNF778;ANKRD11 ENSG00000170100;ENSG00000260637 intergenic Human other chr16:89300435 chr16:89300436 . . 0 22 hPsi_associated_SNPs_27316 0 0 1 0 0 unknown 0.438718600983063 0.438718788763386 0 0 hPsi_site_21040 iPseU_CNN:0;iRNA_PseU:0 21041 chr9 125486955 125486955 1 + C A LUAD 125486954 + 125486934 125486974 41 CATCGTCACTGTGCTCAGAATCCCCTCTGCAGCCGGGAAGT CATCGTCACTGTGCTCAGAATACCCTCTGCAGCCGGGAAGT < 41bp 0.489448865186295 0.82882991602412 0.130144 0.1770159 prediction 0.657659832048239 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125486954 chr9:125486955 synonymous SNV . 0 22 hPsi_associated_SNPs_27317 0 0 0 0 0 unknown 0.438721678401433 0.438718645503831 0 0 hPsi_site_21041 iPseU_CNN:0;iRNA_PseU:0 21042 chr5 68412382 68412382 1 + G A LUSC 68412381 + 68412361 68412401 41 GAATCACTAAAACAAATTCTTGAGGAGAGTGACTCTAGGCA GAATCACTAAAACAAATTCTTAAGGAGAGTGACTCTAGGCA < 41bp 0.430236276160486 0.828822338820703 0.2694024 0.50228 prediction 0.657644677641406 Functional Gain - SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68412381 chr5:68412382 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27318 0 0 1 2 1 Ribosome 0.438754123920033 0.438725105750205 0.0045599999999999 0 hPsi_site_21042 iPseU_CNN:0.0045599999999999;iRNA_PseU:0 21043 chr17 18138202 18138202 1 + G A CESC 18138201 + 18138181 18138221 41 ATGCCCCGTGCCAGCTATGGTGACCGCCACTGTGTAAGTGT ATGCCCCGTGCCAGCTATGGTAACCGCCACTGTGTAAGTGT < 41bp 0.575011442507946 0.903825850278245 0.22603732 0.39857063 prediction 0.657628815540597 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18138201 chr17:18138202 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_27319 0 0 1 0 1 Cytosol 0.436517036231281 0.438705417296829 0 0 hPsi_site_21043 iPseU_CNN:0;iRNA_PseU:0 21044 chr4 119552689 119552689 1 + C A UCEC 119552688 + 119552668 119552708 41 CAGCTGCCCCAGGCCAAATTTCTTCCTGCCTGCCAGCAGCC CAGCTGCCCCAGGCCAAATTTATTCCTGCCTGCCAGCAGCC < 41bp 0.496950902971325 0.828810788053526 0.31834942 0.40562573 prediction 0.657621576107052 Functional Gain - LOC729218 ENSG00000260404 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:119552688 chr4:119552689 . . 0 22 hPsi_associated_SNPs_27320 0 0 0 0 0 unknown 0.438719112269372 0.438720124703022 0 0 hPsi_site_21044 iPseU_CNN:0;iRNA_PseU:0 21045 chr16 88874545 88874545 1 + G A rs3218720 88874544 + 88874524 88874564 41 GGAAATGGAGAAGCACCTGCTGCTCCTCTCCGAGCTGCTGC GGAAATGGAGAAGCACCTGCTACTCCTCTCCGAGCTGCTGC < 41bp 0.567360229678783 0.896169882240682 0.21027842 0.67610496 prediction 0.657619305123799 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874544 chr16:88874545 synonymous SNV . 0 22 hPsi_associated_SNPs_27321 0 0 1 0 1 Cytosol 0.438718592956365 0.438718593423565 0.35220992 0 hPsi_site_21045 iPseU_CNN:0.35220992;iRNA_PseU:0 21046 chr11 111922022 111922022 1 + G T LUAD 111922021 + 111922001 111922041 41 TAAAAGCTTCAGCTTTGGCATGTTTAAAAGTTCCCGAAGCA TAAAAGCTTCAGCTTTGGCATTTTTAAAAGTTCCCGAAGCA < 41bp 0.49673939734273 0.828804931831159 0.3040734 0.4533771 prediction 0.657609863662317 Functional Gain - DLAT ENSG00000150768 CDS Human protein_coding chr11:111922021 chr11:111922022 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27322 0 0 1 0 2 Cytosol 0.438718611995845 0.438714654363038 0 0 hPsi_site_21046 iPseU_CNN:0;iRNA_PseU:0 21047 chr20 45354080 45354080 1 + G T LUAD 45354079 + 45354059 45354099 41 GCCACGGCAGCGGGGAGTGCTGGTGTCCCTCTATGAGGCAG GCCACGGCAGCGGGGAGTGCTTGTGTCCCTCTATGAGGCAG < 41bp 0.500813798890474 0.829618280459735 0.27839524 0.42186055 prediction 0.657608963138522 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45354079 chr20:45354080 synonymous SNV . 0 22 hPsi_associated_SNPs_27323 0 0 0 0 0 Nucleus 0.438719021952151 0.438718583129247 0 0 hPsi_site_21047 iPseU_CNN:0;iRNA_PseU:0 21048 chr2 79350057 79350057 1 + G A COAD 79350056 + 79350036 79350076 41 AGTGTTAATCCTGGCTACTGTGTGAGCCTGACCTCAAGCAC AGTGTTAATCCTGGCTACTGTATGAGCCTGACCTCAAGCAC < 41bp 0.565496658034265 0.894288220543632 0.3304328 0.42650408 prediction 0.657583125018734 Functional Gain - REG1A ENSG00000115386 CDS Human protein_coding chr2:79350056 chr2:79350057 nonsynonymous SNV 0.325 2 22 hPsi_associated_SNPs_27324 0 0 0 0 2 Ribosome 0.439207094679554 0.438718233504712 0 0 hPsi_site_21048 iPseU_CNN:0;iRNA_PseU:0 21049 chr6 32813509 32813509 1 + G A LUSC 32813508 + 32813488 32813528 41 CAGGCTGAGGTGCTGGGTGATGAGAAGCACTGAGCGGGAGT CAGGCTGAGGTGCTGGGTGATAAGAAGCACTGAGCGGGAGT < 41bp 0.504572365768137 0.833362106765654 0.22862479 0.33960915 prediction 0.657579481995033 Functional Gain - TAP1 ENSG00000168394 CDS Human protein_coding chr6:32813508 chr6:32813509 synonymous SNV . 0 22 hPsi_associated_SNPs_27325 0 0 0 0 0 Ribosome 0.438718622048838 0.394410144917024 0 0 hPsi_site_21049 iPseU_CNN:0;iRNA_PseU:0 21050 chr1 84962022 84962022 1 + C A UCEC 84962021 + 84962001 84962041 41 TTCAGAAAGGAACCTTTGATTCTAAATATGGAGAGTATGAA TTCAGAAAGGAACCTTTGATTATAAATATGGAGAGTATGAA < 41bp 0.508216056434388 0.836996744063948 0.21722817 0.2507409 prediction 0.657561375259121 Functional Gain - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84962021 chr1:84962022 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27326 0 0 1 0 2 Ribosome 0.438712303817758 0.438717675902337 0 0 hPsi_site_21050 iPseU_CNN:0;iRNA_PseU:0 21051 chr19 14569124 14569124 1 + C A UCEC 14569123 + 14569103 14569143 41 ATTCCTGAAGTTGGAGGATTTCTTGGACAATGAGAGGCATG ATTCCTGAAGTTGGAGGATTTATTGGACAATGAGAGGCATG < 41bp 0.533583071861699 0.862363043034241 0.30011284 0.6295533 prediction 0.657559942345084 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14569123 chr19:14569124 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27327 0 0 1 0 2 Ribosome 0.438564604560247 0.436993652913914 0.2591066 0 hPsi_site_21051 iPseU_CNN:0.2591066;iRNA_PseU:0 21052 chr1 40724018 40724018 1 + C A UCEC 40724017 + 40723997 40724037 41 TATCTTCGGGGCCGTGCTGCTCTTTTCCTGGACAGTGTATC TATCTTCGGGGCCGTGCTGCTATTTTCCTGGACAGTGTATC < 41bp 0.496294302537202 0.828776182346975 0.2052437 0.35565934 prediction 0.657552364693951 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40724017 chr1:40724018 synonymous SNV . 0 22 hPsi_associated_SNPs_27328 0 0 1 0 1 Endoplasmic reticulum 0.438718756682776 0.438718229069404 0 0 hPsi_site_21052 iPseU_CNN:0;iRNA_PseU:0 21053 chr19 855757 855757 1 + G A STAD 855756 + 855736 855776 41 TCTGCCGTCGCAGCAACGTCTGCACTCTCGTGAGGGGCCGG TCTGCCGTCGCAGCAACGTCTACACTCTCGTGAGGGGCCGG < 41bp 0.432066521060632 0.828773081758059 0.66940093 0.7267791 prediction 0.657546163516119 Functional Gain - ELANE ENSG00000197561 CDS Human protein_coding chr19:855756 chr19:855757 nonsynonymous SNV 0.036 4 22 hPsi_associated_SNPs_27329 0 0 0 0 1 exosome 0.438579859016739 0.438701409513162 0.11475634 0 hPsi_site_21053 iPseU_CNN:0.11475634;iRNA_PseU:0 21054 chr2 219313997 219313997 1 + G A SKCM 219313996 + 219313976 219314016 41 GCCTTTGGGATGACTCCAGCTGCCTTCTCTGCTCTGCCTCG GCCTTTGGGATGACTCCAGCTACCTTCTCTGCTCTGCCTCG < 41bp 0.570489206778853 0.899260012521694 0.31917906 0.54825324 prediction 0.657541611485683 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219313996 chr2:219313997 nonsynonymous SNV 0.984 0 22 hPsi_associated_SNPs_27330 0 0 0 0 1 Nucleus 0.438708765906858 0.438661462587661 0.09650648 0 hPsi_site_21054 iPseU_CNN:0.09650648;iRNA_PseU:0 21055 chr3 47449859 47449859 1 + G A rs138754006 47449858 + 47449838 47449878 41 GTTCATGGATTCAATGCAGTTGGATCCCGAGACGGTGGACA GTTCATGGATTCAATGCAGTTAGATCCCGAGACGGTGGACA < 41bp 0.575675713457969 0.904446390404933 0.42463824 0.86229193 prediction 0.657541353893928 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47449858 chr3:47449859 synonymous SNV . 0 22 hPsi_associated_SNPs_27331 0 0 1 0 1 chromatin 0.438726094783376 0.438676735253055 0.72458386 0 hPsi_site_21055 iPseU_CNN:0.72458386;iRNA_PseU:0 21056 chr1 248308577 248308577 1 + C A BLCA 248308576 + 248308556 248308596 41 CAGTGGCCTTCATGGGAAACTCTGTCATGGTTCTCCTCATC CAGTGGCCTTCATGGGAAACTATGTCATGGTTCTCCTCATC < 41bp 0.509992729953194 0.838759924770386 0.3346284 0.5067908 prediction 0.657534389634383 Functional Gain - OR2M5 ENSG00000162727 CDS Human protein_coding chr1:248308576 chr1:248308577 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27332 0 0 0 0 0 unknown 0.43875994741545 0.438685341428219 0.0135816 0 hPsi_site_21056 iPseU_CNN:0.0135816;iRNA_PseU:0 Red vs. brown/black hair color 21057 chr2 102836423 102836423 1 + C A UCEC 102836422 + 102836402 102836442 41 AAAATGGAAGATTATGGCCTTCCTTTCATGTGCCACGCTGG AAAATGGAAGATTATGGCCTTACTTTCATGTGCCACGCTGG < 41bp 0.537876730899098 0.866642473263871 0.32460523 0.6236893 prediction 0.657531484729544 Functional Gain - IL1RL2 ENSG00000115598 CDS Human protein_coding chr2:102836422 chr2:102836423 nonsynonymous SNV 0.963 1 22 hPsi_associated_SNPs_27333 0 0 0 0 2 exosome 0.43877976875836 0.438746932235116 0.2473786 0 hPsi_site_21057 iPseU_CNN:0.2473786;iRNA_PseU:0 21058 chr18 14335143 14335143 1 + G A rs551601405 14335142 + 14335122 14335162 41 GGACAAAGCAGGTGTTTGGATGGACCTGGGAGATCTTGCTC GGACAAAGCAGGTGTTTGGATAGACCTGGGAGATCTTGCTC < 41bp 0.51177265228114 0.840538039194024 0.23467478 0.5743463 prediction 0.657530773825769 Functional Gain - ANKRD20A5P;CYP4F35P ENSG00000264222;ENSG00000265787 intergenic Human other chr18:14335142 chr18:14335143 . . 0 22 hPsi_associated_SNPs_27334 0 0 0 0 0 unknown 0.438737251298024 0.438718905540756 0.1486926 0 hPsi_site_21058 iPseU_CNN:0.1486926;iRNA_PseU:0 21059 chr15 66169715 66169715 1 + C A UCEC 66169714 + 66169694 66169734 41 TTGGAAAGAGTAATCTCCTGTCTCGATTTACTCGAAATGAG TTGGAAAGAGTAATCTCCTGTATCGATTTACTCGAAATGAG < 41bp 0.478971802745957 0.828764941290728 0.37674597 0.6938917 prediction 0.657529882581455 Functional Gain - RAB11A ENSG00000103769 CDS Human protein_coding chr15:66169714 chr15:66169715 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27335 0 0 1 0 1 Ribosome 0.43875312476021 0.43872947698734 0.3877834 0 hPsi_site_21059 iPseU_CNN:0.3877834;iRNA_PseU:0 21060 chr1 40881971 40881971 1 + C A CESC 40881970 + 40881950 40881990 41 CAGCTCTCTAAAGACTCCATTCTTTCACTGTATGGATCCCA CAGCTCTCTAAAGACTCCATTATTTCACTGTATGGATCCCA < 41bp 0.4712242112341 0.828763692388984 0.5453434 0.4870893 prediction 0.657527384777967 Functional Gain - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40881970 chr1:40881971 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27336 0 0 1 0 1 Ribosome 0.438737181156402 0.438718668292228 0 0 hPsi_site_21060 iPseU_CNN:0;iRNA_PseU:0 21061 chr3 99513943 99513943 1 + C A HNSC 99513942 + 99513922 99513962 41 GGCCTGCCTGGAATCCCAGGTCCTATGGGCCCTCCAGGTGC GGCCTGCCTGGAATCCCAGGTACTATGGGCCCTCCAGGTGC < 41bp 0.54415005579075 0.872906195635364 0.25483674 0.58033156 prediction 0.657512279689228 Functional Gain - COL8A1 ENSG00000144810 CDS Human protein_coding chr3:99513942 chr3:99513943 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_27337 0 0 0 0 0 Cytosol 0.438718594409333 0.438718595838727 0.16066312 0 hPsi_site_21061 iPseU_CNN:0.16066312;iRNA_PseU:0 21062 chr14 20528853 20528853 1 + C A GBM 20528852 + 20528832 20528872 41 GTTTCATCCTCTTGCTTGTTTCTTACATTGTCATCCTGGTC GTTTCATCCTCTTGCTTGTTTATTACATTGTCATCCTGGTC < 41bp 0.505508115471361 0.834262527148645 0.3829864 0.411241 prediction 0.657508823354569 Functional Gain - OR4L1 ENSG00000176246 CDS Human protein_coding chr14:20528852 chr14:20528853 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_27338 0 0 0 0 0 unknown 0.438607266236413 0.43859208896603 0 0 hPsi_site_21062 iPseU_CNN:0;iRNA_PseU:0 21063 chr3 183778117 183778117 1 + G A rs146776408 183778116 + 183778096 183778136 41 ATGGCCTCCTCCATCCTTACTGTCATTGTCCTCTGGAACAC ATGGCCTCCTCCATCCTTACTATCATTGTCCTCTGGAACAC < 41bp 0.441444068288855 0.828751951852319 0.32802337 0.6744783 prediction 0.657503903704638 Functional Gain - HTR3C ENSG00000178084 CDS Human protein_coding chr3:183778116 chr3:183778117 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27339 0 0 0 0 0 exosome 0.438723778109328 0.438726327415179 0.3489566 0 hPsi_site_21063 iPseU_CNN:0.3489566;iRNA_PseU:0 21064 chr21 42647470 42647470 1 + G A STAD 42647469 + 42647449 42647489 41 CTTAATCGTCCTGCTGCTGCTGCCGTTCCGGTGTCAGCGTC CTTAATCGTCCTGCTGCTGCTACCGTTCCGGTGTCAGCGTC < 41bp 0.419550017573277 0.82874823014834 0.43826652 0.7014245 prediction 0.657496460296681 Functional Gain - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42647469 chr21:42647470 synonymous SNV . 0 22 hPsi_associated_SNPs_27340 0 0 1 6 0 Ribosome 0.438763652316533 0.438862101569935 0.402849 0 hPsi_site_21064 iPseU_CNN:0.402849;iRNA_PseU:0 21065 chr9 138438707 138438707 1 + G A BLCA 138438706 + 138438686 138438726 41 GCCCAGGAAGGTGTCCCCAGTGAAGGTGACAGCCCTGGGCG GCCCAGGAAGGTGTCCCCAGTAAAGGTGACAGCCCTGGGCG < 41bp 0.423717389082118 0.828746615468781 0.2656359 0.61462367 prediction 0.657493230937563 Functional Gain - OBP2A ENSG00000122136 CDS Human protein_coding chr9:138438706 chr9:138438707 synonymous SNV . 0 22 hPsi_associated_SNPs_27341 0 0 0 0 2 unknown 0.438704840095434 0.438712624033697 0.22924734 0 hPsi_site_21065 iPseU_CNN:0.22924734;iRNA_PseU:0 21066 chr9 32634236 32634236 1 + G A OV 32634235 + 32634215 32634255 41 AGCCTGCCAGGCTTGCACCCTGAGGTTTTGTCCCTTTGTGT AGCCTGCCAGGCTTGCACCCTAAGGTTTTGTCCCTTTGTGT < 41bp 0.444086522924206 0.828743924914786 0.24618399 0.28186446 prediction 0.657487849829571 Functional Gain - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634235 chr9:32634236 stopgain 0.169 1 22 hPsi_associated_SNPs_27342 0 0 0 0 0 exosome 0.438718409535055 0.438718592993673 0 0 hPsi_site_21066 iPseU_CNN:0;iRNA_PseU:0 21067 chr14 95053897 95053897 1 + C A COAD 95053896 + 95053876 95053916 41 TGCCCCCAGCCAGAGCATCTTCTTCTCCCCTGTGAGCATCT TGCCCCCAGCCAGAGCATCTTATTCTCCCCTGTGAGCATCT < 41bp 0.542932722549834 0.871672300230466 0.27760285 0.30200544 prediction 0.657479155361264 Functional Gain - SERPINA5 ENSG00000188488 CDS Human protein_coding chr14:95053896 chr14:95053897 nonsynonymous SNV 0.956 2 22 hPsi_associated_SNPs_27343 0 0 1 0 0 cytosol 0.43871933671065 0.438271097008778 0 0 hPsi_site_21067 iPseU_CNN:0;iRNA_PseU:0 21068 chr5 140558018 140558018 1 + C A LIHC 140558017 + 140557997 140558037 41 AACGACCACTCTCCAGTATTTCTGGACAAACAAATGTTGGT AACGACCACTCTCCAGTATTTATGGACAAACAAATGTTGGT < 41bp 0.481907570810924 0.828733767098175 0.27586633 0.45146668 prediction 0.65746753419635 Functional Gain - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140558017 chr5:140558018 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_27344 0 0 0 0 0 exosome 0.438717973342257 0.438718969013686 0 0 hPsi_site_21068 iPseU_CNN:0;iRNA_PseU:0 21069 chr1 167064152 167064152 1 + G A BLCA 167064151 + 167064131 167064171 41 CGAGGAGGACGAAGCCAACGTGAGGGCGGTGCAGGCCCACT CGAGGAGGACGAAGCCAACGTAAGGGCGGTGCAGGCCCACT < 41bp 0.422126027850502 0.828733743502061 0.25245684 0.37408718 prediction 0.657467487004121 Functional Gain - DUSP27 ENSG00000198842 CDS Human protein_coding chr1:167064151 chr1:167064152 synonymous SNV . 0 22 hPsi_associated_SNPs_27345 0 0 0 0 1 Endoplasmic reticulum 0.438718605152361 0.438718592997949 0 0 hPsi_site_21069 iPseU_CNN:0;iRNA_PseU:0 21070 chr7 133812281 133812281 1 + C A LGG 133812280 + 133812260 133812300 41 GGCAGAAGACGAAAGGCAGCTCTAACATAGCCTCCTCCTAC GGCAGAAGACGAAAGGCAGCTATAACATAGCCTCCTCCTAC < 41bp 0.481409708672703 0.828732754548488 0.3212 0.46199927 prediction 0.657465509096976 Functional Gain - LRGUK ENSG00000155530 CDS Human protein_coding chr7:133812280 chr7:133812281 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_27346 0 0 0 0 0 cytosol 0.438718589317227 0.438718817570321 0 0 hPsi_site_21070 iPseU_CNN:0;iRNA_PseU:0 21071 chr20 11903390 11903390 1 + C A UCEC 11903389 + 11903369 11903409 41 TGCCAGAGCCTGTGTTAATTTCCTGGAGACCAGCCTGAGTG TGCCAGAGCCTGTGTTAATTTACTGGAGACCAGCCTGAGTG < 41bp 0.535102918935865 0.86383255000786 0.16048759 0.5631007 prediction 0.657459262143989 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903389 chr20:11903390 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27347 0 0 1 0 0 Cytosol 0.438718592995118 0.43871874829766 0.1262014 0 hPsi_site_21071 iPseU_CNN:0.1262014;iRNA_PseU:0 21072 chr5 140801776 140801776 1 + C A UCEC 140801775 + 140801755 140801795 41 CAAGGCCAAGATGGTGGAGGTCTCTTTACCACCACGACGAT CAAGGCCAAGATGGTGGAGGTATCTTTACCACCACGACGAT < 41bp 0.525886784025735 0.854602266063019 0.18711314 0.6607744 prediction 0.657430964074567 Functional Gain - PCDHGA11 ENSG00000253873 CDS Human protein_coding chr5:140801775 chr5:140801776 nonsynonymous SNV 0.757 3 22 hPsi_associated_SNPs_27348 0 0 1 0 0 exosome 0.438718729422647 0.438717464807821 0.3215488 0 hPsi_site_21072 iPseU_CNN:0.3215488;iRNA_PseU:0 21073 chr17 73519851 73519851 1 + G A UCEC 73519850 + 73519830 73519870 41 GCAAACCCTATGCCCGGATGTGCATTAGTGGGTACGCAGTG GCAAACCCTATGCCCGGATGTACATTAGTGGGTACGCAGTG < 41bp 0.413578902014446 0.828708795223168 0.32427275 0.3481042 prediction 0.657417590446335 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73519850 chr17:73519851 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_27349 0 0 1 0 1 Cytosol 0.438719212073541 0.438718735711564 0 0 hPsi_site_21073 iPseU_CNN:0;iRNA_PseU:0 21074 chr16 8732989 8732989 1 + G A LUSC 8732988 + 8732968 8733008 41 TCCATGTGCCAGCGAAACATTGCCCTCAACAGCCACCTGGC TCCATGTGCCAGCGAAACATTACCCTCAACAGCCACCTGGC < 41bp 0.581532832169767 0.910230187619286 0.24197641 0.4374265 prediction 0.657394710899037 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8732988 chr16:8732989 nonsynonymous SNV 0.954 0 22 hPsi_associated_SNPs_27350 0 0 1 0 2 Cytosol 0.438440636400727 0.43673982221798 0 0 hPsi_site_21074 iPseU_CNN:0;iRNA_PseU:0 21075 chr11 55339900 55339900 1 + C A LUAD 55339899 + 55339879 55339919 41 CAGCGAGTGCATGATCCAAGTCTTTTCATCCCATGTCTTTG CAGCGAGTGCATGATCCAAGTATTTTCATCCCATGTCTTTG < 41bp 0.512200759384535 0.840893792284095 0.18510407 0.2928164 prediction 0.65738606579912 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55339899 chr11:55339900 synonymous SNV . 0 22 hPsi_associated_SNPs_27351 0 0 0 0 0 unknown 0.438823995871491 0.438044041634177 0 0 hPsi_site_21075 iPseU_CNN:0;iRNA_PseU:0 21076 chr1 22903181 22903181 1 + C A rs56193119 22903180 + 22903160 22903200 41 TGCCCTGCCATGGTGCGCAATCTGGCTGCCTTCTCGGAGGC TGCCCTGCCATGGTGCGCAATATGGCTGCCTTCTCGGAGGC < 41bp 0.463008675259122 0.828692368847044 0.46102887 0.6138508 prediction 0.657384737694088 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22903180 chr1:22903181 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_27352 0 0 0 0 0 exosome 0.438716180284013 0.438718833233641 0.2277016 0 hPsi_site_21076 iPseU_CNN:0.2277016;iRNA_PseU:0 21077 chr3 120489630 120489630 1 + G A LAML 120489629 + 120489609 120489649 41 AGAAGAGGATGAATCAGCAATGCCCAAAAAAGATGCACGCA AGAAGAGGATGAATCAGCAATACCCAAAAAAGATGCACGCA < 41bp 0.423104340504388 0.828686823825366 0.18854406 0.7140673 prediction 0.657373647650731 Functional Gain - GTF2E1 ENSG00000153767 CDS Human protein_coding chr3:120489629 chr3:120489630 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27353 0 0 0 0 1 Cytosol 0.438745244556721 0.438725504309693 0.4281346 0 hPsi_site_21077 iPseU_CNN:0.4281346;iRNA_PseU:0 21078 chrX 128881696 128881696 1 + C A UCEC 128881695 + 128881675 128881715 41 GAGAGGCCACCGGTTCCAAATCAACCCATTTATGCCCTGCA GAGAGGCCACCGGTTCCAAATAAACCCATTTATGCCCTGCA < 41bp 0.465804488566433 0.82868489699092 0.3591994 0.39597142 prediction 0.65736979398184 Functional Gain - XPNPEP2 ENSG00000122121 CDS Human protein_coding chrX:128881695 chrX:128881696 nonsynonymous SNV 0.763 0 22 hPsi_associated_SNPs_27354 0 0 0 0 1 exosome 0.438718597857866 0.438718565948079 0 0 hPsi_site_21078 iPseU_CNN:0;iRNA_PseU:0 21079 chr11 55340052 55340052 1 + C A HNSC 55340051 + 55340031 55340071 41 TGGCTGTGGCCTGGGTGGGATCCTGTGTGCATTCTTTAGTT TGGCTGTGGCCTGGGTGGGATACTGTGTGCATTCTTTAGTT < 41bp 0.511118046445845 0.839802079845285 0.16715327 0.3308093 prediction 0.65736806679888 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55340051 chr11:55340052 nonsynonymous SNV 0.904 4 22 hPsi_associated_SNPs_27355 0 0 0 0 0 unknown 0.4387185898634 0.438705304162 0 0 hPsi_site_21079 iPseU_CNN:0;iRNA_PseU:0 21080 chr19 58966626 58966626 1 + G A CESC 58966625 + 58966605 58966645 41 CCCAGATACCCCACCTGGGATGACTACTAGCGTCTTCCCAG CCCAGATACCCCACCTGGGATAACTACTAGCGTCTTCCCAG < 41bp 0.42854099323133 0.828680423378971 0.33501655 0.72569615 prediction 0.657360846757943 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58966625 chr19:58966626 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27356 0 0 0 0 1 exosome 0.438718000546287 0.438718592980932 0.4513923 0 hPsi_site_21080 iPseU_CNN:0.4513923;iRNA_PseU:0 21081 chr17 65735085 65735085 1 + C A COAD 65735084 + 65735064 65735104 41 TCAGCATATAGCGAGACATTTCTTCTGCCTCATTTGAAAGA TCAGCATATAGCGAGACATTTATTCTGCCTCATTTGAAAGA < 41bp 0.473148249195081 0.828676772337313 0.4766678 0.64487725 prediction 0.657353544674626 Functional Gain - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735084 chr17:65735085 nonsynonymous SNV 0.843 3 22 hPsi_associated_SNPs_27357 0 0 1 0 2 Nucleus 0.438718623290452 0.438692878729024 0.2897545 0 hPsi_site_21081 iPseU_CNN:0.2897545;iRNA_PseU:0 21082 chr1 47279668 47279668 1 + C A LUAD 47279667 + 47279647 47279687 41 CTTCCAGTACCATAATGACTTCATCTACTGGCTCACCCCAC CTTCCAGTACCATAATGACTTAATCTACTGGCTCACCCCAC < 41bp 0.459780369326928 0.828674930560395 0.25059518 0.5147967 prediction 0.65734986112079 Functional Gain - CYP4B1 ENSG00000142973 CDS Human protein_coding chr1:47279667 chr1:47279668 stopgain 0.865 0 22 hPsi_associated_SNPs_27358 0 0 0 0 3 exosome 0.438941304754776 0.438748438632819 0.0295934 0 hPsi_site_21082 iPseU_CNN:0.0295934;iRNA_PseU:0 21083 chrX 89177447 89177447 1 + C A UCEC 89177446 + 89177426 89177466 41 ACAGCGTAGAAACGACCCCATCATTGGCCACAAAACGGGCA ACAGCGTAGAAACGACCCCATAATTGGCCACAAAACGGGCA < 41bp 0.535760762242724 0.864435687125053 0.29273275 0.41065627 prediction 0.657349849764659 Functional Gain - TGIF2LX ENSG00000153779 CDS Human protein_coding chrX:89177446 chrX:89177447 synonymous SNV . 0 22 hPsi_associated_SNPs_27359 0 0 0 0 0 exosome 0.438718592989753 0.438718592995102 0 0 hPsi_site_21083 iPseU_CNN:0;iRNA_PseU:0 21084 chr19 53762522 53762522 1 + C A HNSC 53762521 + 53762501 53762541 41 CAAACAGCAGGTACAACACATCTGTAGGAACAATCTCTACC CAAACAGCAGGTACAACACATATGTAGGAACAATCTCTACC < 41bp 0.518224105776027 0.846897000800398 0.4297603 0.5640298 prediction 0.657345790048742 Functional Gain - VN1R2 ENSG00000196131 CDS Human protein_coding chr19:53762521 chr19:53762522 synonymous SNV . 0 22 hPsi_associated_SNPs_27360 0 0 0 0 0 unknown 0.438717897083973 0.438755484598721 0.1280596 0 hPsi_site_21084 iPseU_CNN:0.1280596;iRNA_PseU:0 21085 chr17 42852635 42852635 1 + C A GBM 42852634 + 42852614 42852654 41 ATCGACGAGTACAACCAGTTTCTGCAGGAGGGTGGTGGCAG ATCGACGAGTACAACCAGTTTATGCAGGAGGGTGGTGGCAG < 41bp 0.537887017185569 0.866554268294362 0.42582256 0.52289 prediction 0.657334502217586 Functional Gain - ADAM11 ENSG00000073670 CDS Human protein_coding chr17:42852634 chr17:42852635 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27361 0 0 0 0 2 chromatin 0.43871861701457 0.438718259287161 0.0457799999999999 0 hPsi_site_21085 iPseU_CNN:0.0457799999999999;iRNA_PseU:0 21086 chr16 2752416 2752416 1 + G A rs148272021 2752415 + 2752395 2752435 41 CCAAGCCGAGTTCCTCTGTGTGGTGTCCAAGGAGCTGCACA CCAAGCCGAGTTCCTCTGTGTAGTGTCCAAGGAGCTGCACA < 41bp 0.574540560694508 0.903200043084532 0.32457408 0.77011514 prediction 0.657318964780049 Functional Gain - KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2752415 chr16:2752416 nonsynonymous SNV 0.983 1 22 hPsi_associated_SNPs_27362 0 0 1 0 2 Ribosome 0.43848630108946 0.43871924117778 0.54023028 0 hPsi_site_21086 iPseU_CNN:0.54023028;iRNA_PseU:0 21087 chr1 46978148 46978148 1 + C A ESCA 46978147 + 46978127 46978167 41 GCACGCGGCCTCCCTGGGACTCGATACGCTGCCCAACTGAC GCACGCGGCCTCCCTGGGACTAGATACGCTGCCCAACTGAC < 41bp 0.520655246197045 0.849312077196123 0.45569474 0.40810975 prediction 0.657313661998157 Functional Gain - DMBX1 ENSG00000197587 CDS Human protein_coding chr1:46978147 chr1:46978148 synonymous SNV . 0 22 hPsi_associated_SNPs_27363 0 0 1 0 0 nucleolus 0.438763344624534 0.402342483774887 0 0 hPsi_site_21087 iPseU_CNN:0;iRNA_PseU:0 21088 chr20 57014047 57014047 1 + G A UCEC 57014046 + 57014026 57014066 41 TTATGGATTCAAAACTTAGATGTGTGTTTGAATTGCCAGCA TTATGGATTCAAAACTTAGATATGTGTTTGAATTGCCAGCA < 41bp 0.439558353547834 0.828655068294653 0.24370831 0.31236178 prediction 0.657310136589305 Functional Gain - VAPB ENSG00000124164 CDS Human protein_coding chr20:57014046 chr20:57014047 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27364 0 0 1 0 2 Ribosome 0.438718777641036 0.438718597935366 0 0 hPsi_site_21088 iPseU_CNN:0;iRNA_PseU:0 21089 chr12 120031782 120031782 1 + C A UCEC 120031781 + 120031761 120031801 41 CTACCTGTGGCTCACCATCGTCTCGTGTTTTTGCCCTGCGT CTACCTGTGGCTCACCATCGTATCGTGTTTTTGCCCTGCGT < 41bp 0.475988413038334 0.828653441470336 0.46019745 0.7889377 prediction 0.657306882940673 Functional Gain - TMEM233 ENSG00000224982 CDS Human protein_coding chr12:120031781 chr12:120031782 synonymous SNV . 0 22 hPsi_associated_SNPs_27365 0 0 0 0 1 exosome 0.438671454101198 0.438719617011394 0.5778754 0 hPsi_site_21089 iPseU_CNN:0.5778754;iRNA_PseU:0 21090 chr2 228786214 228786214 1 + G A LUSC 228786213 + 228786193 228786233 41 GGCCAGTGCCTCCAGGTTCTTGAGGGGCACACTGATGAAAT GGCCAGTGCCTCCAGGTTCTTAAGGGGCACACTGATGAAAT < 41bp 0.421325675801458 0.82865296685933 0.23887783 0.7094502 prediction 0.65730593371866 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228786213 chr2:228786214 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27366 0 0 0 0 2 exosome 0.438711392904252 0.438718665915933 0.4189004 0 hPsi_site_21090 iPseU_CNN:0.4189004;iRNA_PseU:0 21091 chr11 126164412 126164412 1 + G A rs73631789 126164411 + 126164391 126164431 41 TGGGAGCTTCATCAGTGGTCTGGCTAAAGCTGATACTTTCA TGGGAGCTTCATCAGTGGTCTAGCTAAAGCTGATACTTTCA < 41bp 0.460772617243844 0.828652062214426 0.24545068 0.38623223 prediction 0.657304124428853 Functional Gain - TIRAP ENSG00000255062 CDS Human antisense chr11:126164411 chr11:126164412 synonymous SNV . 0 22 hPsi_associated_SNPs_27367 0 0 0 0 0 exosome 0.438716655422295 0.438718543727252 0 0 hPsi_site_21091 iPseU_CNN:0;iRNA_PseU:0 21092 chr16 88779032 88779032 1 + G A rs2290896 88779031 + 88779011 88779051 41 GTCTCCCTCATCCCGGAAGGTGTTCAGCCTGCCACCGTCGG GTCTCCCTCATCCCGGAAGGTATTCAGCCTGCCACCGTCGG < 41bp 0.419883252016599 0.828648973889606 0.31342518 0.6377336 prediction 0.657297947779212 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779031 chr16:88779032 synonymous SNV . 0 22 hPsi_associated_SNPs_27368 0 0 1 0 1 Cytosol 0.438720799654529 0.438718759895761 0.2754672 0 hPsi_site_21092 iPseU_CNN:0.2754672;iRNA_PseU:0 21093 chr16 84690791 84690791 1 + G T LUAD 84690790 + 84690770 84690810 41 CCTGGAGACGGCTCACCTGCTGCAGATCTGGACGGTGGTAG CCTGGAGACGGCTCACCTGCTTCAGATCTGGACGGTGGTAG < 41bp 0.502978098690192 0.831618448532874 0.40986717 0.72339076 prediction 0.657280699685363 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84690790 chr16:84690791 synonymous SNV . 0 22 hPsi_associated_SNPs_27369 0 0 1 0 0 chromatin 0.438714450315434 0.439028361915481 0.44678152 0 hPsi_site_21093 iPseU_CNN:0.44678152;iRNA_PseU:0 21094 chr9 107457282 107457282 1 + C A COAD 107457281 + 107457261 107457301 41 ACCTCCCTATTGCAAACAGTTCTGACAATGATGTTGCCTTT ACCTCCCTATTGCAAACAGTTATGACAATGATGTTGCCTTT < 41bp 0.508614544702399 0.837253037810938 0.29138973 0.45935744 prediction 0.657276986217078 Functional Gain - OR13D1 ENSG00000179055 CDS Human protein_coding chr9:107457281 chr9:107457282 nonsynonymous SNV 0.893 1 22 hPsi_associated_SNPs_27370 0 0 0 0 0 unknown 0.438724046656957 0.442332705688613 0 0 hPsi_site_21094 iPseU_CNN:0;iRNA_PseU:0 21095 chr8 145535203 145535203 1 + G A STAD 145535202 + 145535182 145535222 41 TCCCCACAGCCCCCTGATGCTGAACGACAGTGGCTCAGCAC TCCCCACAGCCCCCTGATGCTAAACGACAGTGGCTCAGCAC < 41bp 0.4229813630293 0.828636639994587 0.20430556 0.31820422 prediction 0.657273279989175 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535202 chr8:145535203 synonymous SNV . 0 22 hPsi_associated_SNPs_27371 0 0 1 0 2 chromatin 0.438716028270379 0.438666477550131 0 0 hPsi_site_21095 iPseU_CNN:0;iRNA_PseU:0 21096 chr5 140475592 140475592 1 + G A SKCM 140475591 + 140475571 140475611 41 TGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACC TGAGAACTTTTACACTCTGGTAATAAGCACGGCCCTGGACC < 41bp 0.452543034669255 0.828635601698782 0.23837203 0.37164843 prediction 0.657271203397564 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475591 chr5:140475592 synonymous SNV . 0 22 hPsi_associated_SNPs_27372 0 0 1 0 0 exosome 0.438718593002298 0.438718592995296 0 0 hPsi_site_21096 iPseU_CNN:0;iRNA_PseU:0 21097 chr1 47515726 47515726 1 + G A SKCM 47515725 + 47515705 47515745 41 GTTAAAGGTAACCATTGCCTTGATTCTGCTCCACTTCAGAG GTTAAAGGTAACCATTGCCTTAATTCTGCTCCACTTCAGAG < 41bp 0.428822613505751 0.828633953047064 0.28922188 0.62315947 prediction 0.657267906094127 Functional Gain - CYP4X1 ENSG00000186377 CDS Human protein_coding chr1:47515725 chr1:47515726 synonymous SNV . 0 22 hPsi_associated_SNPs_27373 0 0 1 0 1 Ribosome 0.438718592999149 0.438721122704427 0.24631894 0 hPsi_site_21097 iPseU_CNN:0.24631894;iRNA_PseU:0 21098 chr20 43355740 43355740 1 + C A HNSC 43355739 + 43355719 43355759 41 CCCCCCTAGGACCCCAGTTTTCTGGCCTTGTCTCTTCCCTG CCCCCCTAGGACCCCAGTTTTATGGCCTTGTCTCTTCCCTG < 41bp 0.479497068378603 0.82863284745779 0.45450008 0.64384615 prediction 0.65726569491558 Functional Gain - WISP2 ENSG00000064205 CDS Human protein_coding chr20:43355739 chr20:43355740 nonsynonymous SNV 0.776 0 22 hPsi_associated_SNPs_27374 0 0 0 0 1 nucleus 0.438718592995125 0.438718592995102 0.2876923 0 hPsi_site_21098 iPseU_CNN:0.2876923;iRNA_PseU:0 21099 chr7 135328025 135328025 1 + C A UCEC 135328024 + 135328004 135328044 41 GAAACAGAGTGCTAATGATTTCTTCAGCTATTATGACAGTC GAAACAGAGTGCTAATGATTTATTCAGCTATTATGACAGTC < 41bp 0.477294473681657 0.828629788672805 0.43928617 0.45315436 prediction 0.65725957734561 Functional Gain - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328024 chr7:135328025 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27375 0 0 1 1 2 Cytosol 0.438726594122223 0.438671963174467 0 0 hPsi_site_21099 iPseU_CNN:0;iRNA_PseU:0 21100 chr6 167721349 167721349 1 + C A UCEC 167721348 + 167721328 167721368 41 TCTGGCAGTGTTCTTCGTATTCTCTGGCCTGTGGGGCGTGG TCTGGCAGTGTTCTTCGTATTATCTGGCCTGTGGGGCGTGG < 41bp 0.455004080027619 0.828627969985397 0.7102543 0.8342011 prediction 0.657255939970793 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167721348 chr6:167721349 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_27376 0 0 1 0 2 cytosol 0.438716187585851 0.438718468733595 0.2478936 0 hPsi_site_21100 iPseU_CNN:0.2478936;iRNA_PseU:0 21101 chr5 112227759 112227759 1 + G A UCEC 112227758 + 112227738 112227778 41 GAAAGAAAAAGAGGAAGCTGTGCAGAAGATGCTGGATCAGG GAAAGAAAAAGAGGAAGCTGTACAGAAGATGCTGGATCAGG < 41bp 0.444048403638284 0.828623578319501 0.35628933 0.7685176 prediction 0.657247156639001 Functional Gain - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112227758 chr5:112227759 synonymous SNV . 0 22 hPsi_associated_SNPs_27377 0 0 1 0 0 Ribosome 0.438716356082241 0.438720006083077 0.5370352 0 hPsi_site_21101 iPseU_CNN:0.5370352;iRNA_PseU:0 21102 chr2 114220004 114220004 1 + G A UCEC 114220003 + 114219983 114220023 41 AGGCAAGTTGCTTTGGCAGATGCCATTCTCATTAATAAAAC AGGCAAGTTGCTTTGGCAGATACCATTCTCATTAATAAAAC < 41bp 0.555597782684328 0.88421422887326 0.22633186 0.35626203 prediction 0.657232892377863 Functional Gain - CBWD2 ENSG00000136682 CDS Human protein_coding chr2:114220003 chr2:114220004 nonsynonymous SNV 0.799 1 22 hPsi_associated_SNPs_27378 0 0 1 1 2 chromatin 0.438668553625265 0.438879718044554 0 0 hPsi_site_21102 iPseU_CNN:0;iRNA_PseU:0 21103 chr1 115576090 115576090 1 + G A SKCM 115576089 + 115576069 115576109 41 TGCACATCGAAAGGAGAGAGTGTGCTTATTGCCTAACCATC TGCACATCGAAAGGAGAGAGTATGCTTATTGCCTAACCATC < 41bp 0.428237271959961 0.828606482471582 0.32081202 0.5559032 prediction 0.657212964943163 Functional Gain - TSHB ENSG00000134200 CDS Human protein_coding chr1:115576089 chr1:115576090 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_27379 0 0 0 0 1 exosome 0.438617460146655 0.438705921529885 0.1118064 0 hPsi_site_21103 iPseU_CNN:0.1118064;iRNA_PseU:0 21104 chr19 44636605 44636605 1 + C A UCEC 44636604 + 44636584 44636624 41 CTGAGAATTCACAGCTTCATTCCCATCAGAGGGTTCACACT CTGAGAATTCACAGCTTCATTACCATCAGAGGGTTCACACT < 41bp 0.483441045412518 0.82860589270361 0.22377238 0.2678938 prediction 0.657211785407219 Functional Gain - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44636604 chr19:44636605 nonsynonymous SNV 0.846 0 22 hPsi_associated_SNPs_27380 0 0 1 0 0 exosome 0.438718337599554 0.438715273496309 0 0 hPsi_site_21104 iPseU_CNN:0;iRNA_PseU:0 21105 chr2 113819735 113819735 1 + G A LUSC 113819734 + 113819714 113819754 41 CGTGGTCCCCAATCGGTGGCTGGATGCCAGCCTGTCCCCCG CGTGGTCCCCAATCGGTGGCTAGATGCCAGCCTGTCCCCCG < 41bp 0.407001816199997 0.828602237650421 0.3832885 0.77067274 prediction 0.657204475300842 Functional Gain - IL36RN ENSG00000136695 CDS Human protein_coding chr2:113819734 chr2:113819735 synonymous SNV . 0 22 hPsi_associated_SNPs_27381 0 0 0 0 2 exosome 0.438718419077284 0.438993935994783 0.54134548 0 hPsi_site_21105 iPseU_CNN:0.54134548;iRNA_PseU:0 21106 chr16 30964706 30964706 1 + G A LAML 30964705 + 30964685 30964725 41 CCAGTCGCCACACCAGAGACTGCACCGCTACGTGGAGCTGG CCAGTCGCCACACCAGAGACTACACCGCTACGTGGAGCTGG < 41bp 0.418186857981226 0.82859892116218 0.15813178 0.2720211 prediction 0.65719784232436 Functional Gain - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964705 chr16:30964706 synonymous SNV . 0 22 hPsi_associated_SNPs_27382 0 0 1 0 0 chromatin 0.438711317306373 0.438718018875282 0 0 hPsi_site_21106 iPseU_CNN:0;iRNA_PseU:0 21107 chr8 99961327 99961327 1 + G A LGG 99961326 + 99961306 99961346 41 TCTCAGCGCGGTACAGACCATGCACATGAACCACTGGACGC TCTCAGCGCGGTACAGACCATACACATGAACCACTGGACGC < 41bp 0.40786590752793 0.828591522982953 0.23495007 0.5274433 prediction 0.657183045965905 Functional Gain - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961326 chr8:99961327 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27383 0 0 0 0 0 exosome 0.434266445575773 0.422713090654146 0.0548865999999999 0 hPsi_site_21107 iPseU_CNN:0.0548865999999999;iRNA_PseU:0 21108 chr15 91453858 91453858 1 + C A BRCA 91453857 + 91453837 91453877 41 ACATTGGGGCTCTTCCAGCATCACGATGCCATCACTGGCAC ACATTGGGGCTCTTCCAGCATAACGATGCCATCACTGGCAC < 41bp 0.456349611625309 0.828584959885768 0.30864757 0.5562947 prediction 0.657169919771536 Functional Gain - MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91453857 chr15:91453858 nonsynonymous SNV 0.992 5 22 hPsi_associated_SNPs_27384 0 0 1 0 1 Endoplasmic reticulum 0.43861066756606 0.438679776492865 0.1125894 0 hPsi_site_21108 iPseU_CNN:0.1125894;iRNA_PseU:0 21109 chr4 122723908 122723908 1 + G A BLCA 122723907 + 122723887 122723927 41 GGTATTCTTTTTTTTAACCTTGAACTCTCTCAGATGGCCGC GGTATTCTTTTTTTTAACCTTAAACTCTCTCAGATGGCCGC < 41bp 0.551243331445181 0.879825952283608 0.263215 0.30383754 prediction 0.657165241676855 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122723907 chr4:122723908 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27385 0 0 1 0 1 Nucleus 0.438718592988919 0.438718592995034 0 0 hPsi_site_21109 iPseU_CNN:0;iRNA_PseU:0 21110 chr13 25154649 25154649 1 + G A rs561713797 25154648 + 25154628 25154668 41 AGCAGGTTTTATATTGGGTGTGTGGTTTGACCTACAAGCCA AGCAGGTTTTATATTGGGTGTATGGTTTGACCTACAAGCCA < 41bp 0.53443607167889 0.863016211678656 0.3198731 0.4262421 prediction 0.657160279999533 Functional Gain - TPTE2P6 ENSG00000205822;ENSG00000243008 ncRNA_intronic Human other chr13:25154648 chr13:25154649 . . 0 22 hPsi_associated_SNPs_27386 0 0 0 2 0 unknown 0.438672718950279 0.438719004844009 0 0 hPsi_site_21110 iPseU_CNN:0;iRNA_PseU:0 21111 chr11 55322311 55322311 1 + G A STAD 55322310 + 55322290 55322330 41 GCCATGGCCTATGATCGTTATGTGGCCATTTGCAAGCCCTT GCCATGGCCTATGATCGTTATATGGCCATTTGCAAGCCCTT < 41bp 0.563554297944385 0.892133104744339 0.43892094 0.43351287 prediction 0.657157613599908 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322310 chr11:55322311 nonsynonymous SNV 0.933 3 22 hPsi_associated_SNPs_27387 0 0 0 0 0 unknown 0.439206218650944 0.438777906384187 0 0 hPsi_site_21111 iPseU_CNN:0;iRNA_PseU:0 21112 chr17 65717547 65717547 1 + G A HNSC 65717546 + 65717526 65717566 41 GCAAGGGACAGAACCCTTGGTGCTCTTCAAGGAAGGTGCTG GCAAGGGACAGAACCCTTGGTACTCTTCAAGGAAGGTGCTG < 41bp 0.413880737977062 0.828577004184302 0.3267607 0.9304192 prediction 0.657154008368605 Functional Gain - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65717546 chr17:65717547 synonymous SNV . 0 22 hPsi_associated_SNPs_27388 0 0 1 0 2 Nucleus 0.438718701626652 0.438719398752378 0.8608384 0 hPsi_site_21112 iPseU_CNN:0.8608384;iRNA_PseU:0 21113 chr17 1631244 1631244 1 + G A UCEC 1631243 + 1631223 1631263 41 GCTGATGGTGCGGCTGGGCCTGCAGGCATTTCTCACTCACC GCTGATGGTGCGGCTGGGCCTACAGGCATTTCTCACTCACC < 41bp 0.430518080131908 0.828575762523337 0.21190688 0.26839185 prediction 0.657151525046674 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1631243 chr17:1631244 synonymous SNV . 0 22 hPsi_associated_SNPs_27389 0 0 1 0 0 Endoplasmic reticulum 0.438718592014925 0.438717490198318 0 0 hPsi_site_21113 iPseU_CNN:0;iRNA_PseU:0 21114 chr11 94862288 94862288 1 + G A rs3740862 94862287 + 94862267 94862307 41 TTTCAATTAATTTATTACCTTGTGGTAGCAATCCTGAAGAA TTTCAATTAATTTATTACCTTATGGTAGCAATCCTGAAGAA < 41bp 0.434926017665032 0.828573511421712 0.21550462 0.29348147 prediction 0.657147022843424 Functional Gain - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94862287 chr11:94862288 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_27390 0 0 1 0 0 Ribosome 0.438763895792251 0.438720223143029 0 0 hPsi_site_21114 iPseU_CNN:0;iRNA_PseU:0 21115 chr3 9726297 9726297 1 + C A UCEC 9726296 + 9726276 9726316 41 CGGGCTGCTGGTACACTGTATCTCAGGCTGGGATCGGACCC CGGGCTGCTGGTACACTGTATATCAGGCTGGGATCGGACCC < 41bp 0.546007917234981 0.87457634210365 0.8203815 0.7390159 prediction 0.657136849737339 Functional Gain - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9726296 chr3:9726297 synonymous SNV . 0 22 hPsi_associated_SNPs_27391 0 0 1 0 2 Ribosome 0.438764322858369 0.438708430228707 0 0 hPsi_site_21115 iPseU_CNN:0;iRNA_PseU:0 21116 chr11 86645488 86645488 1 + G A rs1551501 86645487 + 86645467 86645507 41 ACCTCCCTCCCTTTCTCTGTTGAACTCCTCCCCTTCTCTTC ACCTCCCTCCCTTTCTCTGTTAAACTCCTCCCCTTCTCTTC < 41bp 0.547340432847864 0.875907488010591 0.80315375 0.9271365 prediction 0.657134110325455 Functional Gain - OR7E2P;FZD4 ENSG00000150687 intronic Human protein_coding chr11:86645487 chr11:86645488 . . 0 22 hPsi_associated_SNPs_27392 0 0 0 0 0 unknown 0.438718592948638 0.438718584580012 0.2479655 0 hPsi_site_21116 iPseU_CNN:0.2479655;iRNA_PseU:0 21117 chr22 43525254 43525254 1 + G A COAD 43525253 + 43525233 43525273 41 GGTGCTGCTGGCGCTGCTGCTGCTGCTGGCGCTGCTGCTGC GGTGCTGCTGGCGCTGCTGCTACTGCTGGCGCTGCTGCTGC < 41bp 0.430195933025992 0.828566457914055 0.24433419 0.5329364 prediction 0.657132915828111 Functional Gain - BIK ENSG00000100290 CDS Human protein_coding chr22:43525253 chr22:43525254 synonymous SNV . 0 22 hPsi_associated_SNPs_27393 0 0 0 0 1 Ribosome 0.43503631036461 0.438550136098128 0.0658728 0 hPsi_site_21117 iPseU_CNN:0.0658728;iRNA_PseU:0 21118 chr7 156931941 156931941 1 + G A rs199903783 156931940 + 156931920 156931960 41 GGCTGCTTCCGCGGCGGCGCTGCCCGCACATGGGCTAGGCT GGCTGCTTCCGCGGCGGCGCTACCCGCACATGGGCTAGGCT < 41bp 0.463739625408953 0.828559264154221 0.21944356 0.9073407 prediction 0.657118528308442 Functional Gain - UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931940 chr7:156931941 . . 0 22 hPsi_associated_SNPs_27394 0 0 1 0 1 Ribosome 0.438718593544374 0.438718605417318 0.8146814 0 hPsi_site_21118 iPseU_CNN:0.8146814;iRNA_PseU:0 21119 chr2 220439618 220439618 1 + G A UCEC 220439617 + 220439597 220439637 41 CCTGCTAGGCCTGCTGGCACTGTCACCGGGAGGACCCGTGG CCTGCTAGGCCTGCTGGCACTATCACCGGGAGGACCCGTGG < 41bp 0.424605738687275 0.828555064786125 0.16430241 0.41034743 prediction 0.65711012957225 Functional Gain - INHA ENSG00000123999 CDS Human protein_coding chr2:220439617 chr2:220439618 synonymous SNV . 0 22 hPsi_associated_SNPs_27395 0 0 0 0 0 cytosol 0.43871621149784 0.438718316111599 0 0 hPsi_site_21119 iPseU_CNN:0;iRNA_PseU:0 21120 chr2 73471795 73471795 1 + G T KIRP 73471794 + 73471774 73471814 41 GATGATGCTCGATGATTTGCTGCAGCTTAAAATGATTGGAA GATGATGCTCGATGATTTGCTTCAGCTTAAAATGATTGGAA < 41bp 0.496281379048881 0.828552960434492 0.20176843 0.27226204 prediction 0.657105920868984 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471794 chr2:73471795 synonymous SNV . 0 22 hPsi_associated_SNPs_27396 0 0 1 0 1 Cytosol 0.438932621580732 0.440409248470571 0 0 hPsi_site_21120 iPseU_CNN:0;iRNA_PseU:0 21121 chr3 51746673 51746673 1 + C A LUAD 51746672 + 51746652 51746692 41 CCTATGTGTCCACTGTGGCGTCTGAGGGCGACTATGGCGAG CCTATGTGTCCACTGTGGCGTATGAGGGCGACTATGGCGAG < 41bp 0.538195539943523 0.86674725804185 0.2350201 0.43284875 prediction 0.657103436196654 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51746672 chr3:51746673 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_27397 0 0 0 0 0 Endoplasmic reticulum 0.43871759781485 0.438718576191336 0 0 hPsi_site_21121 iPseU_CNN:0;iRNA_PseU:0 21122 chr7 123516923 123516923 1 + G A UCEC 123516922 + 123516902 123516942 41 TCTGCAGGAACAATGGCAGGTGCATAAGGAAGATGTGGAAC TCTGCAGGAACAATGGCAGGTACATAAGGAAGATGTGGAAC < 41bp 0.422638992825635 0.828549485790778 0.19769084 0.63467103 prediction 0.657098971581556 Functional Gain - HYAL4 ENSG00000106302 CDS Human protein_coding chr7:123516922 chr7:123516923 nonsynonymous SNV 0.563 4 22 hPsi_associated_SNPs_27398 0 0 0 0 0 Nucleus 0.438721515538188 0.438720978208325 0.26934206 0 hPsi_site_21122 iPseU_CNN:0.26934206;iRNA_PseU:0 21123 chr11 64981518 64981518 1 + G A BLCA 64981517 + 64981497 64981537 41 CGGGGCCCTGCCAACCACACTGAGGCCTCCACCAACGACTC CGGGGCCCTGCCAACCACACTAAGGCCTCCACCAACGACTC < 41bp 0.44810168615699 0.828543475053267 0.22157145 0.30102164 prediction 0.657086950106533 Functional Gain - SLC22A20 ENSG00000197847 ncRNA_exonic Human transcribed_unitary_pseudogene chr11:64981517 chr11:64981518 . . 0 22 hPsi_associated_SNPs_27399 0 0 0 0 0 unknown 0.438718592318938 0.438718592995102 0 0 hPsi_site_21123 iPseU_CNN:0;iRNA_PseU:0 21124 chr5 60839628 60839628 1 + G A UCEC 60839627 + 60839607 60839647 41 GGAGCACCGCGGGTACCCCATGAGGGCCTACAAGCTGGCCA GGAGCACCGCGGGTACCCCATAAGGGCCTACAAGCTGGCCA < 41bp 0.427145236724879 0.828542496066345 0.17941529 0.205565 prediction 0.65708499213269 Functional Gain - ZSWIM6 ENSG00000130449 CDS Human protein_coding chr5:60839627 chr5:60839628 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27400 0 0 1 0 0 chromatin 0.438718592814306 0.438718592995217 0 0 hPsi_site_21124 iPseU_CNN:0;iRNA_PseU:0 21125 chr17 38230516 38230516 1 + G A rs547817957 38230515 + 38230495 38230535 41 CGGGACCCACAAACCCAGCTTGCCCCCAGCCCTCCCACCTG CGGGACCCACAAACCCAGCTTACCCCCAGCCCTCCCACCTG < 41bp 0.515116383194143 0.84365703756306 0.27989408 0.51763177 prediction 0.657081308737834 Functional Gain - THRA ENSG00000126351 UTR5 Human protein_coding chr17:38230515 chr17:38230516 . . 0 22 hPsi_associated_SNPs_27401 0 0 1 0 1 Ribosome 0.438718594443804 0.438718621589095 0.0352635400000001 0 hPsi_site_21125 iPseU_CNN:0.0352635400000001;iRNA_PseU:0 21126 chr6 7405508 7405508 1 + G A rs56067778 7405507 + 7405487 7405527 41 TTTATGAGGCACAGTGTTGCTGTCATGACTGTGCGGGAGCT TTTATGAGGCACAGTGTTGCTATCATGACTGTGCGGGAGCT < 41bp 0.422103984248436 0.828534805115148 0.2826656 0.40126616 prediction 0.657069610230296 Functional Gain - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7405507 chr6:7405508 nonsynonymous SNV 0.573 1 22 hPsi_associated_SNPs_27402 0 0 1 0 2 Ribosome 0.435435687557211 0.438456089590236 0 0 hPsi_site_21126 iPseU_CNN:0;iRNA_PseU:0 21127 chr6 30615262 30615262 1 + G A UCEC 30615261 + 30615241 30615281 41 CGGGAGCGGGAGGGAGGCGCTGCCGGGCCTGTCGCGCAAGG CGGGAGCGGGAGGGAGGCGCTACCGGGCCTGTCGCGCAAGG < 41bp 0.50140711040957 0.829938205056127 0.43356645 0.7788221 prediction 0.657062189293115 Functional Gain - C6orf136 ENSG00000204564 CDS Human protein_coding chr6:30615261 chr6:30615262 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_27403 0 0 1 0 0 Cytosol 0.438718763824846 0.438718340073382 0.5576442 0 hPsi_site_21127 iPseU_CNN:0.5576442;iRNA_PseU:0 21128 chr14 54996872 54996872 1 + G A rs11555279 54996871 + 54996851 54996891 41 CTCTGCAGAAGCATGTTTATTGCTTCAGAATAAGCACTCCC CTCTGCAGAAGCATGTTTATTACTTCAGAATAAGCACTCCC < 41bp 0.569465938295608 0.897996212253518 0.34529752 0.5210297 prediction 0.65706054791582 Functional Gain - CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54996871 chr14:54996872 nonsynonymous SNV 0.563 0 22 hPsi_associated_SNPs_27404 0 0 0 0 1 Endoplasmic reticulum 0.438633569037406 0.439019427698209 0.0420594000000001 0 hPsi_site_21128 iPseU_CNN:0.0420594000000001;iRNA_PseU:0 21129 chr1 206757784 206757784 1 + G A COAD 206757783 + 206757763 206757803 41 ACTCCGGCGGCCTGTGACGGTGCCTGCTGGGATCCGGCCCC ACTCCGGCGGCCTGTGACGGTACCTGCTGGGATCCGGCCCC < 41bp 0.57289760304072 0.901426746157349 0.28386986 0.8470549 prediction 0.657058286233259 Functional Gain - RASSF5 ENSG00000136653 CDS Human other chr1:206757783 chr1:206757784 synonymous SNV . 0 22 hPsi_associated_SNPs_27405 0 0 0 0 0 chromatin 0.438718555004854 0.438688637251127 0.6941098 0 hPsi_site_21129 iPseU_CNN:0.6941098;iRNA_PseU:0 21130 chr11 5475300 5475300 1 + C A UCEC 5475299 + 5475279 5475319 41 TGCCTGTGCTGATATCAGTATCAACAGCATCTATGGACTCT TGCCTGTGCTGATATCAGTATAAACAGCATCTATGGACTCT < 41bp 0.510549964555394 0.839074315088808 0.30627406 0.54969466 prediction 0.657048701066828 Functional Gain - OR51I2 ENSG00000187918 CDS Human protein_coding chr11:5475299 chr11:5475300 synonymous SNV . 0 22 hPsi_associated_SNPs_27406 0 0 0 0 0 nucleus 0.438719453487103 0.43871872506647 0.09938932 0 hPsi_site_21130 iPseU_CNN:0.09938932;iRNA_PseU:0 21131 chr16 50261831 50261831 1 + G A PRAD 50261830 + 50261810 50261850 41 AACCGAGTAGGGTCGCAAGATGTATCCTTGGAGTCCTCTCA AACCGAGTAGGGTCGCAAGATATATCCTTGGAGTCCTCTCA < 41bp 0.430044886120315 0.828515826706439 0.5649361 0.72621584 prediction 0.657031653412879 Functional Gain - PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50261830 chr16:50261831 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_27407 0 0 1 0 2 Ribosome 0.438717910745383 0.438718525737466 0.32255948 0 hPsi_site_21131 iPseU_CNN:0.32255948;iRNA_PseU:0 21132 chr20 2843348 2843348 1 + C A BRCA 2843347 + 2843327 2843367 41 CAGCCAGACATGCAGAAGAGTCTGCTCAGGGTTGGCCTGGA CAGCCAGACATGCAGAAGAGTATGCTCAGGGTTGGCCTGGA < 41bp 0.468108727573489 0.828512675906858 0.28551656 0.6303986 prediction 0.657025351813715 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2843347 chr20:2843348 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27408 0 0 0 0 0 chromatin 0.438719729283364 0.438714300213513 0.2607972 0 hPsi_site_21132 iPseU_CNN:0.2607972;iRNA_PseU:0 21133 chr4 71462718 71462718 1 + C A UCEC 71462717 + 71462697 71462737 41 TATTCTTATTTTCATTCAGTTCTTTCCTCAGCAATCTGGAA TATTCTTATTTTCATTCAGTTATTTCCTCAGCAATCTGGAA < 41bp 0.486552444513165 0.828512267609223 0.28083813 0.6733994 prediction 0.657024535218446 Functional Gain - AMBN ENSG00000178522 CDS Human protein_coding chr4:71462717 chr4:71462718 nonsynonymous SNV 0.970 0 22 hPsi_associated_SNPs_27409 0 0 0 0 2 exosome 0.438718570634131 0.438757339053804 0.3467988 0 hPsi_site_21133 iPseU_CNN:0.3467988;iRNA_PseU:0 21134 chr17 42979948 42979948 1 + G A BLCA 42979947 + 42979927 42979967 41 GGCTGACCGGGCAGCGGTGCTGGGGATCCTATGCAGCCTGG GGCTGACCGGGCAGCGGTGCTAGGGATCCTATGCAGCCTGG < 41bp 0.567166797833864 0.895677178065265 0.24167049 0.5342656 prediction 0.657020760462802 Functional Gain - CCDC103 ENSG00000167131 CDS Human protein_coding chr17:42979947 chr17:42979948 synonymous SNV . 0 22 hPsi_associated_SNPs_27410 0 0 0 0 0 exosome 0.438730470137338 0.438718593002087 0.0685312 0 hPsi_site_21134 iPseU_CNN:0.0685312;iRNA_PseU:0 21135 chr21 43867292 43867292 1 + C A COAD 43867291 + 43867271 43867311 41 ATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCAC ATTTAACTGGAGGAACTGGATATCAGGCAACTGAGAGCCAC < 41bp 0.521106489240569 0.849613211210983 0.6384915 0.6405406 prediction 0.657013443940828 Functional Gain - UBASH3A ENSG00000160185 CDS Human protein_coding chr21:43867291 chr21:43867292 synonymous SNV . 0 22 hPsi_associated_SNPs_27411 0 0 0 0 0 exosome 0.438640495825888 0.438647294896063 0.00409820000000005 0 hPsi_site_21135 iPseU_CNN:0.00409820000000005;iRNA_PseU:0 21136 chr9 131095172 131095172 1 + G A UCEC 131095171 + 131095151 131095191 41 TGAGGCTGTCCAGACTGGCCTGCCCATGTGCATCCTGGGTG TGAGGCTGTCCAGACTGGCCTACCCATGTGCATCCTGGGTG < 41bp 0.452059690942338 0.82849804096007 0.3052253 0.4127029 prediction 0.656996081920139 Functional Gain - COQ4 ENSG00000167113 CDS Human protein_coding chr9:131095171 chr9:131095172 synonymous SNV . 0 22 hPsi_associated_SNPs_27412 0 0 1 0 2 Ribosome 0.438718666222547 0.438717551842462 0 0 hPsi_site_21136 iPseU_CNN:0;iRNA_PseU:0 21137 chr14 106951072 106951072 1 + G A rs532069019 106951071 + 106951051 106951091 41 TGGGCATAGTGGCACATGCCTGTAATCCCAGCTACCCGGGA TGGGCATAGTGGCACATGCCTATAATCCCAGCTACCCGGGA < 41bp 0.465588784274992 0.828497957509873 0.43942967 0.59086984 prediction 0.656995915019745 Functional Gain - LINC00221 ENSG00000187156 ncRNA_exonic Human other chr14:106951071 chr14:106951072 . . 0 22 hPsi_associated_SNPs_27413 0 0 1 0 0 unknown 0.438718592995102 0.438718592995102 0.18173968 0 hPsi_site_21137 iPseU_CNN:0.18173968;iRNA_PseU:0 21138 chr17 17997255 17997255 1 + G A STAD 17997254 + 17997234 17997274 41 ATGAAGTCGGGTGATGCCCGTGTGGCGCTGATTGGATTTCC ATGAAGTCGGGTGATGCCCGTATGGCGCTGATTGGATTTCC < 41bp 0.575093043301837 0.903586240470025 0.32716778 0.58051527 prediction 0.656986394336376 Functional Gain - DRG2 ENSG00000108591 CDS Human protein_coding chr17:17997254 chr17:17997255 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_27414 0 0 1 0 1 Cytosol 0.438688007379958 0.438240660400242 0.16103054 0 hPsi_site_21138 iPseU_CNN:0.16103054;iRNA_PseU:0 21139 chr12 55524485 55524485 1 + G A SARC 55524484 + 55524464 55524504 41 CACTCCCATGTTGAATCCTTTGATTTACTCTCTGAGGAACA CACTCCCATGTTGAATCCTTTAATTTACTCTCTGAGGAACA < 41bp 0.542970941633174 0.871456992225954 0.29985374 0.5050828 prediction 0.65697210118556 Functional Gain - OR9K2 ENSG00000170605 CDS Human protein_coding chr12:55524484 chr12:55524485 synonymous SNV . 0 22 hPsi_associated_SNPs_27415 0 0 0 0 0 unknown 0.438718209803774 0.43871859302592 0.0101656000000001 0 hPsi_site_21139 iPseU_CNN:0.0101656000000001;iRNA_PseU:0 21140 chr16 2580867 2580867 1 + G T BLCA 2580868 - 2580848 2580888 41 GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAG GAGGTGGGTATCCCTGCACCTAACACCTCTCAGGAGGTCAG < 41bp 0.515474943945204 0.843956714449524 0.15784761 0.22782329 prediction 0.656963541008641 Functional Gain - CEMP1 ENSG00000205923 CDS Human protein_coding chr16:2580868 chr16:2580867 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_27416 0 0 0 0 0 exosome 0.438761167504526 0.438718471438833 0 0 hPsi_site_21140 iPseU_CNN:0;iRNA_PseU:0 21141 chr16 28965912 28965912 1 + C A GBM 28965911 + 28965891 28965931 41 GAGCTGGCAGATTCGAGTGGTCTCTACCATGAGGGCTCCCC GAGCTGGCAGATTCGAGTGGTATCTACCATGAGGGCTCCCC < 41bp 0.540974340856201 0.869454078691294 0.57632804 0.79763055 prediction 0.656959475670187 Functional Gain - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28965911 chr16:28965912 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_27417 0 0 1 0 2 Ribosome 0.438718593370902 0.438718611493146 0.44260502 0 hPsi_site_21141 iPseU_CNN:0.44260502;iRNA_PseU:0 21142 chr19 55493795 55493795 1 + C A UCEC 55493794 + 55493774 55493814 41 CCACAAATTCAAATATGCGTTCTACCTCAGCTGCAGGGAGC CCACAAATTCAAATATGCGTTATACCTCAGCTGCAGGGAGC < 41bp 0.537499125455748 0.865971425096033 0.49477556 0.59727824 prediction 0.656944599280571 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55493794 chr19:55493795 nonsynonymous SNV 0.204 4 22 hPsi_associated_SNPs_27418 0 0 0 0 0 Cytosol 0.435951344263545 0.43870396000702 0.19455648 0 hPsi_site_21142 iPseU_CNN:0.19455648;iRNA_PseU:0 21143 chr10 3177999 3177999 1 + G A THCA 3177998 + 3177978 3178018 41 AGAAACGTTATTTTTCAACCTGTGGCAGAGCTGAAGAAGCA AGAAACGTTATTTTTCAACCTATGGCAGAGCTGAAGAAGCA < 41bp 0.412634378363987 0.828472031798947 0.20313153 0.26564848 prediction 0.656944063597894 Functional Gain - PFKP ENSG00000067057 CDS Human protein_coding chr10:3177998 chr10:3177999 nonsynonymous SNV 0.584 2 22 hPsi_associated_SNPs_27419 0 0 1 0 2 Nucleus 0.438718543504671 0.438718591602621 0 0 hPsi_site_21143 iPseU_CNN:0;iRNA_PseU:0 21144 chr3 57898270 57898270 1 + C A GBM 57898269 + 57898249 57898289 41 AGCGGGACACTGACATTGCTTCTTTACAAGAAGAGCTTAAG AGCGGGACACTGACATTGCTTATTTACAAGAAGAGCTTAAG < 41bp 0.525979897343331 0.854445620822005 0.27119887 0.36330873 prediction 0.656931446957348 Functional Gain - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898269 chr3:57898270 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_27420 0 0 1 0 0 Ribosome 0.438864747507972 0.438640701040054 0 0 hPsi_site_21144 iPseU_CNN:0;iRNA_PseU:0 21145 chr4 1388306 1388306 1 + G A BLCA 1388305 + 1388285 1388325 41 GTCCCTGCACCTCTTATGCATGAGCCCTCGCTTTGTGCCAA GTCCCTGCACCTCTTATGCATAAGCCCTCGCTTTGTGCCAA < 41bp 0.555364573864794 0.883824119941422 0.34478575 0.70923424 prediction 0.656919092153256 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388305 chr4:1388306 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_27421 0 0 1 0 0 chromatin 0.438718595657665 0.438733208095058 0.41846848 0 hPsi_site_21145 iPseU_CNN:0.41846848;iRNA_PseU:0 21146 chr5 137735660 137735660 1 + G T LUAD 137735659 + 137735639 137735679 41 GCAAATGTGGATTTGGGGTCTGCCTTGACTGTTACCGGCTC GCAAATGTGGATTTGGGGTCTTCCTTGACTGTTACCGGCTC < 41bp 0.48850638170247 0.828456119747703 0.33574754 0.3901071 prediction 0.656912239495406 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137735659 chr5:137735660 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27422 0 0 1 0 1 Nucleus 0.438718222207858 0.438724777678909 0 0 hPsi_site_21146 iPseU_CNN:0;iRNA_PseU:0 21147 chr19 49375671 49375671 1 + G A rs113445675 49375670 + 49375650 49375690 41 TAAAAGCCTAGTGGCCATTGTGTTCGTTGCTCTTATCGGTT TAAAAGCCTAGTGGCCATTGTATTCGTTGCTCTTATCGGTT < 41bp 0.449171982651703 0.828453911720914 0.6787751 0.923667 prediction 0.656907823441828 Functional Gain - PPP1R15A ENSG00000087074 UTR5 Human protein_coding chr19:49375670 chr19:49375671 . . 0 22 hPsi_associated_SNPs_27423 0 0 0 0 0 Cytosol 0.438621747576151 0.438718304547956 0.4897838 0 hPsi_site_21147 iPseU_CNN:0.4897838;iRNA_PseU:0 21148 chr16 614007 614007 1 + C A LUAD 614006 + 613986 614026 41 CCCATGTGCCCTTCCTGGCCTCGGCCAGCCCCCTGCTGCCC CCCATGTGCCCTTCCTGGCCTAGGCCAGCCCCCTGCTGCCC < 41bp 0.526277634204587 0.854729362467444 0.24272072 0.3788605 prediction 0.656903456525715 Functional Gain - PRR35 ENSG00000161992 CDS Human protein_coding chr16:614006 chr16:614007 stopgain 0.645 1 22 hPsi_associated_SNPs_27424 0 0 0 0 0 exosome 0.438718588886204 0.438718592485393 0 0 hPsi_site_21148 iPseU_CNN:0;iRNA_PseU:0 21149 chr13 111143618 111143618 1 + G A COAD 111143617 + 111143597 111143637 41 GGAGAGAAGGGAACAGAAGGTGACATCGGCTTCCCTGGGAT GGAGAGAAGGGAACAGAAGGTAACATCGGCTTCCCTGGGAT < 41bp 0.431768240634065 0.828449640067649 0.27009457 0.5627368 prediction 0.656899280135299 Functional Gain - COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111143617 chr13:111143618 nonsynonymous SNV 0.021 2 22 hPsi_associated_SNPs_27425 0 0 1 0 2 Cytosol 0.438718592851029 0.438718592994952 0.1254736 0 hPsi_site_21149 iPseU_CNN:0.1254736;iRNA_PseU:0 21150 chr17 78972941 78972941 1 + G A LIHC 78972940 + 78972920 78972960 41 GCCCAGGCAGGCGGAGCTGGTGGCAGCTTCGTAACGTGGCC GCCCAGGCAGGCGGAGCTGGTAGCAGCTTCGTAACGTGGCC < 41bp 0.561960035078378 0.890408637973645 0.2437908 0.5243365 prediction 0.656897205790533 Functional Gain - CHMP6 ENSG00000176108 CDS Human protein_coding chr17:78972940 chr17:78972941 synonymous SNV . 0 22 hPsi_associated_SNPs_27426 0 0 1 0 1 Ribosome 0.438678618702647 0.438718593677091 0.048673 0 hPsi_site_21150 iPseU_CNN:0.048673;iRNA_PseU:0 21151 chrX 118151569 118151569 1 + C A LUSC 118151568 + 118151548 118151588 41 CTTGGAAAGCCGAGCTCAGCTCCCCTTCCTAGCAATGAGGT CTTGGAAAGCCGAGCTCAGCTACCCTTCCTAGCAATGAGGT < 41bp 0.533781924229083 0.862230045358048 0.13642651 0.32282603 prediction 0.656896242257929 Functional Gain - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118151568 chrX:118151569 synonymous SNV . 0 22 hPsi_associated_SNPs_27427 0 0 0 0 1 chromatin 0.43871859286297 0.438718560149207 0 0 hPsi_site_21151 iPseU_CNN:0;iRNA_PseU:0 21152 chr14 20249103 20249103 1 + G A rs141721077 20249102 + 20249082 20249122 41 TGTAGTAGTGGTCTGATCTCTGTGGTGTGTTTCATTGCTCT TGTAGTAGTGGTCTGATCTCTATGGTGTGTTTCATTGCTCT < 41bp 0.454576894354739 0.828447045452813 0.30715138 0.3135234 prediction 0.656894090905626 Functional Gain - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20249102 chr14:20249103 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_27428 0 0 0 0 0 unknown 0.43874768448526 0.438741896429622 0 0 hPsi_site_21152 iPseU_CNN:0;iRNA_PseU:0 21153 chr19 41888766 41888766 1 + C A GBM 41888765 + 41888745 41888785 41 CGACCACCTCGGCTTGGCTGTCTTCTCCATGCTGTGTTGTT CGACCACCTCGGCTTGGCTGTATTCTCCATGCTGTGTTGTT < 41bp 0.473807157128531 0.828446308256988 0.74639094 0.91236746 prediction 0.656892616513976 Functional Gain - TMEM91 ENSG00000142046 CDS Human protein_coding chr19:41888765 chr19:41888766 synonymous SNV . 0 22 hPsi_associated_SNPs_27429 0 0 1 0 2 chromatin 0.438668512919183 0.444182192856147 0.33195304 0 hPsi_site_21153 iPseU_CNN:0.33195304;iRNA_PseU:0 21154 chr3 49569262 49569262 1 + G A UCEC 49569261 + 49569241 49569281 41 AAACCAGCAACGCCTTCAACTGACTCCACCACCACCACGAC AAACCAGCAACGCCTTCAACTAACTCCACCACCACCACGAC < 41bp 0.428411681894464 0.828435417142374 0.22598544 0.47053397 prediction 0.656870834284748 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569261 chr3:49569262 nonsynonymous SNV 0.795 0 22 hPsi_associated_SNPs_27430 0 0 1 0 0 Nucleus 0.438738840230096 0.438697230742886 0 0 hPsi_site_21154 iPseU_CNN:0;iRNA_PseU:0 21155 chr5 109110547 109110547 1 + C A UCEC 109110546 + 109110526 109110566 41 AAGCTTTTTCGTACCAAAGTTCTCCTGGCTCCACTAGGAGA AAGCTTTTTCGTACCAAAGTTATCCTGGCTCCACTAGGAGA < 41bp 0.478910847563507 0.828433670149303 0.22977069 0.5451319 prediction 0.656867340298606 Functional Gain - MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109110546 chr5:109110547 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_27431 0 0 1 0 1 Cytosol 0.43871346240068 0.428017090987775 0.0902638 0 hPsi_site_21155 iPseU_CNN:0.0902638;iRNA_PseU:0 21156 chr12 123466127 123466127 1 + C A UCEC 123466126 + 123466106 123466146 41 CTGGCCTTCCAGCCTCACCTTCTCCCTGCATCACAGAGAGA CTGGCCTTCCAGCCTCACCTTATCCCTGCATCACAGAGAGA < 41bp 0.481233355072771 0.82843034035482 0.25557256 0.36180997 prediction 0.656860680709641 Functional Gain - ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123466126 chr12:123466127 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27432 0 0 1 0 1 Cytosol 0.438714809956962 0.438716161964475 0 0 hPsi_site_21156 iPseU_CNN:0;iRNA_PseU:0 21157 chr1 28893865 28893865 1 + G A UCEC 28893864 + 28893844 28893884 41 AGAAGCGAGCCCTGACGGAGTGCCAGGGAGCAGTGGGACTG AGAAGCGAGCCCTGACGGAGTACCAGGGAGCAGTGGGACTG < 41bp 0.572305760243524 0.90073353098667 0.16608733 0.2515235 prediction 0.656855541486293 Functional Gain - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28893864 chr1:28893865 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27433 0 0 1 0 1 Ribosome 0.438600111003274 0.438688007553535 0 0 hPsi_site_21157 iPseU_CNN:0;iRNA_PseU:0 21158 chr11 55595502 55595502 1 + G A LUSC 55595501 + 55595481 55595521 41 AGTTCAGGCAACAGTGGAGATGTTGACAAAGTGGCCACCGT AGTTCAGGCAACAGTGGAGATATTGACAAAGTGGCCACCGT < 41bp 0.549405698680211 0.877832657952179 0.21678951 0.270324 prediction 0.656853918543936 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595501 chr11:55595502 nonsynonymous SNV 0.043 0 22 hPsi_associated_SNPs_27434 0 0 0 0 0 unknown 0.439565158327138 0.438519229120963 0 0 hPsi_site_21158 iPseU_CNN:0;iRNA_PseU:0 21159 chr2 228771950 228771950 1 + G A UCEC 228771949 + 228771929 228771969 41 GATTACACTGGAAAGCTTATTGCAACTGCTTCAGCTGATGG GATTACACTGGAAAGCTTATTACAACTGCTTCAGCTGATGG < 41bp 0.434219144603875 0.828424580591578 0.2597397 0.5238372 prediction 0.656849161183155 Functional Gain - DAW1 ENSG00000123977 CDS Human protein_coding chr2:228771949 chr2:228771950 nonsynonymous SNV 0.968 1 22 hPsi_associated_SNPs_27435 0 0 0 3 2 exosome 0.435584624860132 0.433962210684008 0.0476744 0 hPsi_site_21159 iPseU_CNN:0.0476744;iRNA_PseU:0 21160 chrX 106171967 106171967 1 + C A UCEC 106171966 + 106171946 106171986 41 CTCTTTACTTGGGCATTATTTCTTCCCTGTTCTCCCTGATA CTCTTTACTTGGGCATTATTTATTCCCTGTTCTCCCTGATA < 41bp 0.531096626318512 0.859520516247994 0.34384912 0.68025315 prediction 0.656847779858963 Functional Gain - CLDN2 ENSG00000165376 CDS Human protein_coding chrX:106171966 chrX:106171967 nonsynonymous SNV 0.942 5 22 hPsi_associated_SNPs_27436 0 0 0 0 0 Ribosome 0.438718592994216 0.438718592391056 0.3605063 0 hPsi_site_21160 iPseU_CNN:0.3605063;iRNA_PseU:0 21161 chr6 142491501 142491501 1 + C A UCEC 142491500 + 142491480 142491520 41 CAGAAACATGATCAAGTCCTTCTATACTGCAAGTCTTTTGA CAGAAACATGATCAAGTCCTTATATACTGCAAGTCTTTTGA < 41bp 0.512788523602731 0.841208923905522 0.5590579 0.43742314 prediction 0.656840800605583 Functional Gain - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142491500 chr6:142491501 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27437 0 0 1 2 2 Ribosome 0.437342905510722 0.426675130533902 0 0 hPsi_site_21161 iPseU_CNN:0;iRNA_PseU:0 21162 chr3 52273336 52273336 1 + G A rs559361708 52273335 + 52273315 52273355 41 TGTGGCAGGAGAGGGGGGCCTGCGTGTGACCGAGCGTGCGT TGTGGCAGGAGAGGGGGGCCTACGTGTGACCGAGCGTGCGT < 41bp 0.487682322779872 0.82842030525817 0.18798882 0.28024563 prediction 0.65684061051634 Functional Gain - LOC101929054 ENSG00000243224 ncRNA_exonic Human antisense chr3:52273335 chr3:52273336 . . 0 22 hPsi_associated_SNPs_27438 0 0 0 0 0 unknown 0.439107317015392 0.437748521072964 0 0 hPsi_site_21162 iPseU_CNN:0;iRNA_PseU:0 21163 chr1 202843284 202843284 1 + G A UCEC 202843283 + 202843263 202843303 41 CCTGGGCATCACCTACATGATGCAGAAGATCACGACCCTGG CCTGGGCATCACCTACATGATACAGAAGATCACGACCCTGG < 41bp 0.537276118490151 0.865693960074148 0.32042047 0.765996 prediction 0.656835683167996 Functional Gain - LOC148709 ENSG00000234996;ENSG00000243113 ncRNA_exonic Human other chr1:202843283 chr1:202843284 . . 0 22 hPsi_associated_SNPs_27439 0 0 0 2 0 unknown 0.442810312792439 0.445920330754392 0.531992 0 hPsi_site_21163 iPseU_CNN:0.531992;iRNA_PseU:0 21164 chr16 23570850 23570850 1 + G A HNSC 23570849 + 23570829 23570869 41 CGTCCCCGAGGATAAAACATTGAGAGAAATAAAAGTGACCA CGTCCCCGAGGATAAAACATTAAGAGAAATAAAAGTGACCA < 41bp 0.416507107788611 0.828415385323081 0.3388666 0.6154601 prediction 0.656830770646162 Functional Gain - UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23570849 chr16:23570850 synonymous SNV . 0 22 hPsi_associated_SNPs_27440 0 0 1 0 1 Ribosome 0.438718565875984 0.438839268687513 0.2309202 0 hPsi_site_21164 iPseU_CNN:0.2309202;iRNA_PseU:0 21165 chr3 51429641 51429641 1 + G A LUSC 51429640 + 51429620 51429660 41 CGCTCGCTGTCCCCCGTCGCTGCCCCGCCCCTGCGGGAGCC CGCTCGCTGTCCCCCGTCGCTACCCCGCCCCTGCGGGAGCC < 41bp 0.437648604882365 0.828407567955174 0.48497996 0.68924177 prediction 0.656815135910348 Functional Gain - RBM15B ENSG00000179837 CDS Human other chr3:51429640 chr3:51429641 nonsynonymous SNV 0.986 0 22 hPsi_associated_SNPs_27441 0 0 1 0 0 Cytosol 0.438718593005622 0.43871861557144 0.37848354 0 hPsi_site_21165 iPseU_CNN:0.37848354;iRNA_PseU:0 21166 chr18 61569760 61569760 1 + G A rs148240038 61569759 + 61569739 61569779 41 AGATGTTAGCATGTTCTTGTTGCTTCCAGATGAAATTGCCG AGATGTTAGCATGTTCTTGTTACTTCCAGATGAAATTGCCG < 41bp 0.568927970319469 0.897322258375162 0.25033227 0.53653955 prediction 0.656788576111387 Functional Gain - SERPINB2 ENSG00000197632;ENSG00000242550 CDS Human other chr18:61569759 chr18:61569760 synonymous SNV . 0 22 hPsi_associated_SNPs_27442 0 0 1 0 1 exosome 0.438239339890621 0.438825108558049 0.0730791 0 hPsi_site_21166 iPseU_CNN:0.0730791;iRNA_PseU:0 21167 chr10 126515187 126515187 1 + C A UCEC 126515186 + 126515166 126515206 41 AGTCATTGGGTGGTACAGATTCCGGCGCAATACGCAGCAGC AGTCATTGGGTGGTACAGATTACGGCGCAATACGCAGCAGC < 41bp 0.485255446081282 0.82837955076153 0.36319208 0.6296154 prediction 0.656759101523061 Functional Gain - ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126515186 chr10:126515187 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_27443 0 0 0 0 1 Nucleus 0.438790293581629 0.437973221963537 0.2592308 0 hPsi_site_21167 iPseU_CNN:0.2592308;iRNA_PseU:0 21168 chr19 55106739 55106739 1 + C A LUSC 55106738 + 55106718 55106758 41 AGCCCCGTACCCATGGGTGGTCCCGGGCCATCTTCTCTGTG AGCCCCGTACCCATGGGTGGTACCGGGCCATCTTCTCTGTG < 41bp 0.455051190419715 0.828371555841686 0.19315454 0.7161088 prediction 0.656743111683372 Functional Gain - LILRA1 ENSG00000104974 CDS Human protein_coding chr19:55106738 chr19:55106739 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_27444 0 0 0 0 0 exosome 0.438717587945458 0.439119275373411 0.4322176 0 hPsi_site_21168 iPseU_CNN:0.4322176;iRNA_PseU:0 21169 chr14 74824883 74824883 1 + C A UCEC 74824882 + 74824862 74824902 41 CTGGGACTCCCCAGCTAGCATCTGTTGGGGAAGGGGCTGTA CTGGGACTCCCCAGCTAGCATATGTTGGGGAAGGGGCTGTA < 41bp 0.523588352033885 0.851958726242619 0.22826448 0.29381073 prediction 0.656740748417468 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74824882 chr14:74824883 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27445 0 0 0 0 0 unknown 0.438718593733709 0.438719357737773 0 0 hPsi_site_21169 iPseU_CNN:0;iRNA_PseU:0 21170 chr3 98109578 98109578 1 + G A SKCM 98109577 + 98109557 98109597 41 ATTTACATATCATCCAAAGCTGAAGACTGTTCTGTTTGTGG ATTTACATATCATCCAAAGCTAAAGACTGTTCTGTTTGTGG < 41bp 0.527174055857004 0.855535071263309 0.32096332 0.43609115 prediction 0.656722030812611 Functional Gain - OR5K3 ENSG00000206536 CDS Human protein_coding chr3:98109577 chr3:98109578 synonymous SNV . 0 22 hPsi_associated_SNPs_27446 0 0 0 0 0 unknown 0.438144861896003 0.437542416802414 0 0 hPsi_site_21170 iPseU_CNN:0;iRNA_PseU:0 21171 chr1 156563828 156563828 1 + G A BLCA 156563827 + 156563807 156563847 41 TCTGGAGAAGAAGTACCAGCTGAACCTGCCACCCTACCCTG TCTGGAGAAGAAGTACCAGCTAAACCTGCCACCCTACCCTG < 41bp 0.567612752953065 0.895973454789362 0.19509187 0.42632395 prediction 0.656721403672594 Functional Gain - NAXE ENSG00000163382 CDS Human protein_coding chr1:156563827 chr1:156563828 nonsynonymous SNV 0.984 1 22 hPsi_associated_SNPs_27447 0 0 1 0 1 Ribosome 0.438997019948336 0.438698243212827 0 0 hPsi_site_21171 iPseU_CNN:0;iRNA_PseU:0 21172 chr1 159558206 159558206 1 + G A SKCM 159558205 + 159558185 159558225 41 CATCAGGTATTGCTGAATTTTGGATCAATGGGACACCTTTG CATCAGGTATTGCTGAATTTTAGATCAATGGGACACCTTTG < 41bp 0.425397947656332 0.828360215906364 0.19193536 0.38182148 prediction 0.656720431812728 Functional Gain - APCS ENSG00000132703 CDS Human protein_coding chr1:159558205 chr1:159558206 stopgain 0.823 1 22 hPsi_associated_SNPs_27448 0 0 0 0 0 Endoplasmic reticulum 0.438718490000653 0.438739739715796 0 0 hPsi_site_21172 iPseU_CNN:0;iRNA_PseU:0 21173 chr7 94181710 94181710 1 + G A LUAD 94181709 + 94181689 94181729 41 AAAAACAAAGCAGAGTGCAATGAACTCCATCCGTCTGTTTC AAAAACAAAGCAGAGTGCAATAAACTCCATCCGTCTGTTTC < 41bp 0.425915051270316 0.828360197548068 0.2836898 0.46387756 prediction 0.656720395096136 Functional Gain - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94181709 chr7:94181710 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27449 0 0 1 0 2 Cytosol 0.439617547717384 0.438597488275263 0 0 hPsi_site_21173 iPseU_CNN:0;iRNA_PseU:0 21174 chr2 68872977 68872977 1 + G A SKCM 68872976 + 68872956 68872996 41 GGAGACCACCATGGGGTTCATGGATGACAATGCCACCAACA GGAGACCACCATGGGGTTCATAGATGACAATGCCACCAACA < 41bp 0.417125110610169 0.828360172014468 0.2551213 0.37334305 prediction 0.656720344028937 Functional Gain - PROKR1 ENSG00000169618 CDS Human protein_coding chr2:68872976 chr2:68872977 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_27450 0 0 0 0 0 exosome 0.438718592995107 0.438720238906911 0 0 hPsi_site_21174 iPseU_CNN:0;iRNA_PseU:0 21175 chr5 178977593 178977593 1 + G A rs558217154 178977592 + 178977572 178977612 41 TGGCCGACCGGGAAGGCGGCTGCGCTGCTGGGCGGGGGCGG TGGCCGACCGGGAAGGCGGCTACGCTGCTGGGCGGGGGCGG < 41bp 0.503976410416694 0.832336580111513 0.352476 0.7991431 prediction 0.656720339389639 Functional Gain - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:178977592 chr5:178977593 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_27451 0 0 1 0 0 Ribosome 0.438718592996053 0.438718593007677 0.5982862 0 hPsi_site_21175 iPseU_CNN:0.5982862;iRNA_PseU:0 21176 chr17 27861210 27861210 1 + G A STAD 27861209 + 27861189 27861229 41 GCAGCAGGAACTGGAGCTGTTGAATGCGTATCAGAGCAAAA GCAGCAGGAACTGGAGCTGTTAAATGCGTATCAGAGCAAAA < 41bp 0.436648414919168 0.828354827830726 0.40087217 0.79091144 prediction 0.656709655661452 Functional Gain - TAOK1 ENSG00000160551 CDS Human protein_coding chr17:27861209 chr17:27861210 synonymous SNV . 0 22 hPsi_associated_SNPs_27452 0 0 1 0 1 Nucleus 0.438718229503688 0.438717998789516 0.58182288 0 hPsi_site_21176 iPseU_CNN:0.58182288;iRNA_PseU:0 21177 chr16 3100495 3100495 1 + C A UCEC 3100494 + 3100474 3100514 41 CTTCCCTGGGGAGCACCCCATCTCCGGGGACACTCACTTTG CTTCCCTGGGGAGCACCCCATATCCGGGGACACTCACTTTG < 41bp 0.455216281791905 0.828353911190131 0.3278079 0.34298027 prediction 0.656707822380263 Functional Gain - MMP25 ENSG00000008516 CDS Human protein_coding chr16:3100494 chr16:3100495 synonymous SNV . 0 22 hPsi_associated_SNPs_27453 0 0 0 0 1 chromatin 0.438718836377785 0.438658528406122 0 0 hPsi_site_21177 iPseU_CNN:0;iRNA_PseU:0 21178 chr16 29818739 29818739 1 + C A BLCA 29818738 + 29818718 29818758 41 TCTCCGGAGGCACGAAGCCATCCACACGGGAGCCAAGGCCG TCTCCGGAGGCACGAAGCCATACACACGGGAGCCAAGGCCG < 41bp 0.527467289872602 0.855818077394442 0.2637576 0.63689595 prediction 0.65670157504368 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29818738 chr16:29818739 synonymous SNV . 0 22 hPsi_associated_SNPs_27454 0 0 1 0 0 Cytosol 0.438589577603824 0.437965246206966 0.2737919 0 hPsi_site_21178 iPseU_CNN:0.2737919;iRNA_PseU:0 21179 chr22 41920853 41920853 1 + G A STAD 41920852 + 41920832 41920872 41 TGGCCACCTCCATTTCAGATTGTCACAGCCCTGGCCATTGC TGGCCACCTCCATTTCAGATTATCACAGCCCTGGCCATTGC < 41bp 0.575481754977191 0.903830673457753 0.36078137 0.67774224 prediction 0.656697836961124 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41920852 chr22:41920853 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27455 0 0 1 0 1 chromatin 0.438842181214438 0.438780121814172 0.35548448 0 hPsi_site_21179 iPseU_CNN:0.35548448;iRNA_PseU:0 21180 chr3 122345735 122345735 1 + C A STAD 122345734 + 122345714 122345754 41 AATCGATGCTATTGTAGACTTCTCATCACAACATTCCACCC AATCGATGCTATTGTAGACTTATCATCACAACATTCCACCC < 41bp 0.47802580877049 0.828336115015524 0.20831245 0.3207547 prediction 0.656672230031048 Functional Gain - PARP15 ENSG00000173200 CDS Human protein_coding chr3:122345734 chr3:122345735 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_27456 0 0 0 0 1 exosome 0.43871938228659 0.438717335572646 0 0 hPsi_site_21180 iPseU_CNN:0;iRNA_PseU:0 21181 chr3 44762444 44762444 1 + C A UCEC 44762443 + 44762423 44762463 41 AGGGATAGTAGTAAAGAGGTTCCAAGAGGATGAATACCAAG AGGGATAGTAGTAAAGAGGTTACAAGAGGATGAATACCAAG < 41bp 0.492816116621621 0.828328745099706 0.42203233 0.6518129 prediction 0.656657490199411 Functional Gain - ZNF502 ENSG00000196653 CDS Human protein_coding chr3:44762443 chr3:44762444 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27457 0 0 0 0 1 exosome 0.438718592900189 0.438718702274409 0.3036258 0 hPsi_site_21181 iPseU_CNN:0.3036258;iRNA_PseU:0 21182 chr15 75311575 75311575 1 + G A rs554135646 75311574 + 75311554 75311594 41 CGTGCGGTAGTAGCTGTGTCTGTGTCCCCTCGTGAAATAGT CGTGCGGTAGTAGCTGTGTCTATGTCCCCTCGTGAAATAGT < 41bp 0.560414664074027 0.888733255489993 0.28983667 0.28202534 prediction 0.656637182831933 Functional Gain - SCAMP5 ENSG00000198794 UTR3 Human protein_coding chr15:75311574 chr15:75311575 . . 0 22 hPsi_associated_SNPs_27458 0 0 1 0 0 cytosol 0.43869893769492 0.438712936781299 0 0 hPsi_site_21182 iPseU_CNN:0;iRNA_PseU:0 21183 chr4 134073227 134073227 1 + C A BLCA 134073226 + 134073206 134073246 41 GCTGCGCACAGCACGCCGAGTCCCGGCCAAGCGCGACCCCC GCTGCGCACAGCACGCCGAGTACCGGCCAAGCGCGACCCCC < 41bp 0.471547582594462 0.828318280605298 0.20599324 0.7036077 prediction 0.656636561210597 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073226 chr4:134073227 synonymous SNV . 0 22 hPsi_associated_SNPs_27459 0 0 0 0 0 cytosol 0.438307998443863 0.427789735710101 0.4072154 0 hPsi_site_21183 iPseU_CNN:0.4072154;iRNA_PseU:0 21184 chr5 6750565 6750565 1 + G A COAD 6750564 + 6750544 6750584 41 GCTGTCCAGCCCCCAGCTCCTGTCTTCAGGCTCCTCGGCCT GCTGTCCAGCCCCCAGCTCCTATCTTCAGGCTCCTCGGCCT < 41bp 0.58038154120195 0.908697266129076 0.27067605 0.4494606 prediction 0.656631449854253 Functional Gain - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6750564 chr5:6750565 synonymous SNV . 0 22 hPsi_associated_SNPs_27460 0 0 1 0 1 Nucleus 0.438704283289693 0.438704020667199 0 0 hPsi_site_21184 iPseU_CNN:0;iRNA_PseU:0 21185 chr19 39600716 39600716 1 + C A COAD 39600715 + 39600695 39600735 41 TGGGAAGATCGTAGATGATGTCTGGGTGGTGAGACCCCTGT TGGGAAGATCGTAGATGATGTATGGGTGGTGAGACCCCTGT < 41bp 0.471155732547161 0.828313930481202 0.2023364 0.51195824 prediction 0.656627860962404 Functional Gain - ACP7 ENSG00000183760 CDS Human protein_coding chr19:39600715 chr19:39600716 synonymous SNV . 0 22 hPsi_associated_SNPs_27461 0 0 0 1 1 exosome 0.438717253298493 0.438811613174455 0.02391648 0 hPsi_site_21185 iPseU_CNN:0.02391648;iRNA_PseU:0 21186 chr16 57111689 57111689 1 + C A UCEC 57111688 + 57111668 57111708 41 CAGTTGGCAGAGTCTCTCGTTCTTTGCAGGCGCCTGGAGGA CAGTTGGCAGAGTCTCTCGTTATTTGCAGGCGCCTGGAGGA < 41bp 0.522321800498456 0.850634889497462 0.67388844 0.78718615 prediction 0.656626177998013 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57111688 chr16:57111689 nonsynonymous SNV 0.017 0 22 hPsi_associated_SNPs_27462 0 0 0 0 2 Ribosome 0.438718797964573 0.438718666221925 0.22659542 0 hPsi_site_21186 iPseU_CNN:0.22659542;iRNA_PseU:0 21187 chr17 39977973 39977973 1 + G T SARC 39977972 + 39977952 39977992 41 GGTGTCCCGGGAGGATGGGCTGCCCACAGGCTACCTGTTTG GGTGTCCCGGGAGGATGGGCTTCCCACAGGCTACCTGTTTG < 41bp 0.513427346950934 0.841724780318793 0.21622708 0.49040782 prediction 0.656594866735718 Functional Gain - FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39977972 chr17:39977973 synonymous SNV . 0 22 hPsi_associated_SNPs_27463 0 0 1 0 2 Nucleus 0.438718592995102 0.438718592995101 0 0 hPsi_site_21187 iPseU_CNN:0;iRNA_PseU:0 21188 chr2 200824491 200824491 1 + G A BLCA 200824490 + 200824470 200824510 41 AACTTAGGTGCTACATGCATTGAAAGAAAAGGTTACTTCAC AACTTAGGTGCTACATGCATTAAAAGAAAAGGTTACTTCAC < 41bp 0.423372825130272 0.828294704147034 0.29855403 0.3285725 prediction 0.656589408294067 Functional Gain - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824490 chr2:200824491 synonymous SNV . 0 22 hPsi_associated_SNPs_27464 0 0 1 0 1 unknown 0.438751752194164 0.438718616535125 0 0 hPsi_site_21188 iPseU_CNN:0;iRNA_PseU:0 21189 chrX 78426648 78426648 1 + G A SKCM 78426647 + 78426627 78426667 41 GTGGGTATTCTATGGTTATATGAAAGAAACAAAACGAGCTG GTGGGTATTCTATGGTTATATAAAAGAAACAAAACGAGCTG < 41bp 0.454004989936213 0.828292468002772 0.22005373 0.38340676 prediction 0.656584936005545 Functional Gain - GPR174 ENSG00000147138 CDS Human protein_coding chrX:78426647 chrX:78426648 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27465 0 0 0 0 0 exosome 0.425867481773476 0.438787676244129 0 0 hPsi_site_21189 iPseU_CNN:0;iRNA_PseU:0 21190 chrX 200939 200939 1 + C A rs146939120 200938 + 200918 200958 41 GACTGGATGTCGGCACTGTGTCCCCGGCTCTGGGATGTGCC GACTGGATGTCGGCACTGTGTACCCGGCTCTGGGATGTGCC < 41bp 0.460993472058211 0.82829235932818 0.19954255 0.5081195 prediction 0.65658471865636 Functional Gain - PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:200938 chrX:200939 nonsynonymous SNV 0.045 0 22 hPsi_associated_SNPs_27466 0 0 1 0 1 Cytosol 0.438713845638238 0.438718614685539 0.0162389999999999 0 hPsi_site_21190 iPseU_CNN:0.0162389999999999;iRNA_PseU:0 21191 chr8 24775733 24775733 1 + G A BRCA 24775732 + 24775712 24775752 41 GGAAGTGAGGAGGAAGGGAGTGATAAAGGTGCCAAGGGATC GGAAGTGAGGAGGAAGGGAGTAATAAAGGTGCCAAGGGATC < 41bp 0.411195554115923 0.828288158273123 0.3335532 0.5875239 prediction 0.656576316546247 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24775732 chr8:24775733 nonsynonymous SNV 0.007 2 22 hPsi_associated_SNPs_27467 0 0 1 0 0 exosome 0.438718592995102 0.438718592995102 0.1750478 0 hPsi_site_21191 iPseU_CNN:0.1750478;iRNA_PseU:0 21192 chr16 1291621 1291621 1 + C A rs372314315 1291620 + 1291600 1291640 41 CTCCAGCCACGTCCACACGGTCACCCTGCCCCCTGCCTCAG CTCCAGCCACGTCCACACGGTAACCCTGCCCCCTGCCTCAG < 41bp 0.542425661563893 0.870712378066558 0.26244235 0.7427275 prediction 0.656573433005328 Functional Gain - TPSAB1 ENSG00000172236 CDS Human protein_coding chr16:1291620 chr16:1291621 synonymous SNV . 0 22 hPsi_associated_SNPs_27468 0 0 0 0 1 exosome 0.43871855722528 0.438718590854888 0.485455 0 hPsi_site_21192 iPseU_CNN:0.485455;iRNA_PseU:0 21193 chr15 76634070 76634070 1 + C A BLCA 76634069 + 76634049 76634089 41 CGCCGCCCCAGGTCTCCTTCTCCGAGTCCGGCTCCCTAGGC CGCCGCCCCAGGTCTCCTTCTACGAGTCCGGCTCCCTAGGC < 41bp 0.466669501184798 0.828286084083207 0.33327487 0.6573657 prediction 0.656572168166415 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76634069 chr15:76634070 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27469 0 0 1 0 1 Cytosol 0.438689060990731 0.438717707097733 0.3147314 0 hPsi_site_21193 iPseU_CNN:0.3147314;iRNA_PseU:0 21194 chr11 55944317 55944317 1 + C A UCEC 55944316 + 55944296 55944336 41 TTGTGGATGCCTGCTATTCATCTGCAATTGCACCCAAAATG TTGTGGATGCCTGCTATTCATATGCAATTGCACCCAAAATG < 41bp 0.508034782425728 0.836320050906989 0.22755405 0.3924933 prediction 0.656570536962522 Functional Gain - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944316 chr11:55944317 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27470 0 0 0 0 0 unknown 0.438871346204874 0.438722853344103 0 0 hPsi_site_21194 iPseU_CNN:0;iRNA_PseU:0 21195 chr19 49593560 49593560 1 + G A UCEC 49593559 + 49593539 49593579 41 TGTTCCCAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGC TGTTCCCAGGACCCTCGAGATACCCCTCCTCCAACTCGTGC < 41bp 0.574498179594517 0.902781452429638 0.2670921 0.7026049 prediction 0.656566545670241 Functional Gain - SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593559 chr19:49593560 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27471 0 0 1 0 2 Nucleus 0.437626427861599 0.437073212537423 0.4052098 0 hPsi_site_21195 iPseU_CNN:0.4052098;iRNA_PseU:0 21196 chr13 58208175 58208175 1 + C A LUAD 58208174 + 58208154 58208194 41 GGCTCTGTGCTCGCCCAGGATCCCGACCTGGGCCAGAACGG GGCTCTGTGCTCGCCCAGGATACCGACCTGGGCCAGAACGG < 41bp 0.470711511886736 0.828279103805838 0.28009617 0.61886454 prediction 0.656558207611676 Functional Gain - PCDH17 ENSG00000118946 CDS Human protein_coding chr13:58208174 chr13:58208175 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_27472 0 0 0 0 0 exosome 0.43871859055764 0.438323764222442 0.23772908 0 hPsi_site_21196 iPseU_CNN:0.23772908;iRNA_PseU:0 21197 chr7 27194551 27194551 1 + C A UCEC 27194550 + 27194530 27194570 41 ATTCCTCCTCGTCTTCCTCTTCTTCATCATCGTCCTCCTCG ATTCCTCCTCGTCTTCCTCTTATTCATCATCGTCCTCCTCG < 41bp 0.50513231551912 0.833410622187247 0.4204061 0.872759 prediction 0.656556613336253 Functional Gain - HOXA7 ENSG00000122592 CDS Human protein_coding chr7:27194550 chr7:27194551 stopgain 0.002 0 22 hPsi_associated_SNPs_27473 0 0 0 0 0 exosome 0.438701140371273 0.438714342501077 0.745518 0 hPsi_site_21197 iPseU_CNN:0.745518;iRNA_PseU:0 21198 chr19 33293965 33293965 1 + C A rs529600129 33293964 + 33293944 33293984 41 CCCCGCAGAGCTGTACGAGTTCACCGCAGGAGTTCTGGAAG CCCCGCAGAGCTGTACGAGTTAACCGCAGGAGTTCTGGAAG < 41bp 0.47004074207807 0.828269505131313 0.2655133 0.71607804 prediction 0.656539010262627 Functional Gain - TDRD12;SLC7A9 ENSG00000173809 CDS Human protein_coding chr19:33293964 chr19:33293965 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_27474 0 0 0 0 1 unknown 0.438784105294388 0.438720081832902 0.43215608 0 hPsi_site_21198 iPseU_CNN:0.43215608;iRNA_PseU:0 21199 chr9 125154730 125154730 1 + C A KIRC 125154729 + 125154709 125154749 41 ACTGAAGAAGCTGGTCTGCCTCAACACCAAGACCTGTCCCT ACTGAAGAAGCTGGTCTGCCTAAACACCAAGACCTGTCCCT < 41bp 0.518935885373299 0.847202924953602 0.51616764 0.6678366 prediction 0.656534079160605 Functional Gain - PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154729 chr9:125154730 synonymous SNV . 0 22 hPsi_associated_SNPs_27475 0 0 1 0 0 nucleolus 0.438721924036473 0.438420211498646 0.30333792 0 hPsi_site_21199 iPseU_CNN:0.30333792;iRNA_PseU:0 21200 chr3 121616317 121616317 1 + C A COAD 121616316 + 121616296 121616336 41 ATACCATGCCTTCAGCAGCCTCTGTTATTTTACTCCCATCC ATACCATGCCTTCAGCAGCCTATGTTATTTTACTCCCATCC < 41bp 0.471693671144066 0.828263027580761 0.17843327 0.1870411 prediction 0.656526055161523 Functional Gain - SLC15A2 ENSG00000163406 CDS Human protein_coding chr3:121616316 chr3:121616317 synonymous SNV . 0 22 hPsi_associated_SNPs_27476 0 0 1 0 2 cytosol 0.438717233090898 0.438711050148203 0 0 hPsi_site_21200 iPseU_CNN:0;iRNA_PseU:0 21201 chr19 16344384 16344384 1 + C A CESC 16344383 + 16344363 16344403 41 CAAGGAGGGCAAGCCCCCGATCAGTGTCAAGTTCGAGATCC CAAGGAGGGCAAGCCCCCGATAAGTGTCAAGTTCGAGATCC < 41bp 0.543523791238113 0.871785839018179 0.20673335 0.55648506 prediction 0.656524095560133 Functional Gain - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16344383 chr19:16344384 synonymous SNV . 0 22 hPsi_associated_SNPs_27477 0 0 1 0 2 Ribosome 0.438718553861113 0.438699779356355 0.11297012 0 hPsi_site_21201 iPseU_CNN:0.11297012;iRNA_PseU:0 21202 chrX 128880246 128880246 1 + C A UCEC 128880245 + 128880225 128880265 41 GACTATGAAGAAAGCAGCTGTCTGGACCGACAGTCGCTACT GACTATGAAGAAAGCAGCTGTATGGACCGACAGTCGCTACT < 41bp 0.452906764191491 0.828258859340013 0.18154484 0.26008958 prediction 0.656517718680026 Functional Gain - XPNPEP2 ENSG00000122121 CDS Human protein_coding chrX:128880245 chrX:128880246 synonymous SNV . 0 22 hPsi_associated_SNPs_27478 0 0 0 0 2 exosome 0.438718672805349 0.438671013364187 0 0 hPsi_site_21202 iPseU_CNN:0;iRNA_PseU:0 21203 chr11 17393654 17393654 1 + C A UCEC 17393653 + 17393633 17393673 41 GAAGAAAGAGCACCTCATATTCTTTTGCACTCGGGCATGGC GAAGAAAGAGCACCTCATATTATTTTGCACTCGGGCATGGC < 41bp 0.475366656921953 0.828258343938739 0.630203 0.6027802 prediction 0.656516687877477 Functional Gain - NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17393653 chr11:17393654 nonsynonymous SNV 0.285 1 22 hPsi_associated_SNPs_27479 0 0 1 0 0 Nucleus 0.438719143102123 0.438727586367924 0 0 hPsi_site_21203 iPseU_CNN:0;iRNA_PseU:0 21204 chr5 126860235 126860235 1 + C A READ 126860234 + 126860214 126860254 41 TTTTTCTAGCGGCAACCAGTTCTTTTTCTTCTCCAAATGTA TTTTTCTAGCGGCAACCAGTTATTTTTCTTCTCCAAATGTA < 41bp 0.507239838038213 0.835498171787399 0.5547637 0.7301214 prediction 0.65651666749837 Functional Gain - PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126860234 chr5:126860235 nonsynonymous SNV 0.883 1 22 hPsi_associated_SNPs_27480 0 0 1 0 1 Nucleus 0.438805076940004 0.440656565589817 0.3507154 0 hPsi_site_21204 iPseU_CNN:0.3507154;iRNA_PseU:0 21205 chrX 129148250 129148250 1 + C A UCEC 129148249 + 129148229 129148269 41 TAGCCTCCCCCGAGCTCCGTTCTTACCCGTATGCATTTTCT TAGCCTCCCCCGAGCTCCGTTATTACCCGTATGCATTTTCT < 41bp 0.467877449911609 0.828257516774036 0.3965618 0.4007943 prediction 0.656515033548072 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148249 chrX:129148250 nonsynonymous SNV 0.950 2 22 hPsi_associated_SNPs_27481 0 0 1 0 0 Cytosol 0.438718595298048 0.438718592938079 0 0 hPsi_site_21205 iPseU_CNN:0;iRNA_PseU:0 21206 chr1 150531885 150531885 1 + G A STAD 150531884 + 150531864 150531904 41 CCTCCCCAGGCCCCCTGCCCTGCAGCCCTGTCAAGGGCAGG CCTCCCCAGGCCCCCTGCCCTACAGCCCTGTCAAGGGCAGG < 41bp 0.407108496453583 0.82824867185137 0.33483315 0.40240145 prediction 0.65649734370274 Functional Gain - ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150531884 chr1:150531885 synonymous SNV . 0 22 hPsi_associated_SNPs_27482 0 0 1 0 1 Endoplasmic reticulum 0.438718590967919 0.438718605033195 0 0 hPsi_site_21206 iPseU_CNN:0;iRNA_PseU:0 21207 chr2 73452787 73452787 1 + G A rs562039812 73452786 + 73452766 73452806 41 GTATCAGCTACTTGGACTGCTGTCAGCGGGAGCGCAGCCGC GTATCAGCTACTTGGACTGCTATCAGCGGGAGCGCAGCCGC < 41bp 0.574944522483711 0.903192649816497 0.3021714 0.66109693 prediction 0.656496254665572 Functional Gain - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73452786 chr2:73452787 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27483 0 0 1 0 2 Ribosome 0.442210843977647 0.444061054012904 0.32219386 0 hPsi_site_21207 iPseU_CNN:0.32219386;iRNA_PseU:0 21208 chr1 12837499 12837499 1 + G A HNSC 12837498 + 12837478 12837518 41 GCTGCGCCACACCGTCGGGCTGAGCAAGCTAAGCCTGGAGC GCTGCGCCACACCGTCGGGCTAAGCAAGCTAAGCCTGGAGC < 41bp 0.426971011100106 0.828247903173636 0.3125098 0.4889026 prediction 0.656495806347271 Functional Gain - PRAMEF12 ENSG00000116726 CDS Human protein_coding chr1:12837498 chr1:12837499 synonymous SNV . 0 22 hPsi_associated_SNPs_27484 0 0 0 0 0 unknown 0.438760712765497 0.438718592732893 0 0 hPsi_site_21208 iPseU_CNN:0;iRNA_PseU:0 21209 chr12 55725553 55725553 1 + G A BLCA 55725552 + 55725532 55725572 41 TGATCCTGACCTTCAGATTGTGATTTTTCTCTTTTTATTTA TGATCCTGACCTTCAGATTGTAATTTTTCTCTTTTTATTTA < 41bp 0.463539266194647 0.828240982840722 0.263763 0.29502288 prediction 0.656481965681444 Functional Gain - OR6C3 ENSG00000205329 CDS Human protein_coding chr12:55725552 chr12:55725553 synonymous SNV . 0 22 hPsi_associated_SNPs_27485 0 0 0 0 0 unknown 0.438718601858246 0.438718524672616 0 0 hPsi_site_21209 iPseU_CNN:0;iRNA_PseU:0 21210 chr13 73636738 73636738 1 + C A UCEC 73636737 + 73636717 73636757 41 CCTATGCTGCTACAATTGCTTCTAAACTGGCAATTCACAAT CCTATGCTGCTACAATTGCTTATAAACTGGCAATTCACAAT < 41bp 0.52639849265599 0.854639071555601 0.34060198 0.39426914 prediction 0.656481157799223 Functional Gain - KLF5 ENSG00000102554 CDS Human protein_coding chr13:73636737 chr13:73636738 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27486 0 0 1 0 0 Cytosol 0.438813420076557 0.438957902094229 0 0 hPsi_site_21210 iPseU_CNN:0;iRNA_PseU:0 21211 chr16 57601828 57601828 1 + G A BRCA 57601827 + 57601807 57601847 41 GCATGCCTCCGTGCTGCTCCTGAACATCGCCTTCCTGCTGA GCATGCCTCCGTGCTGCTCCTAAACATCGCCTTCCTGCTGA < 41bp 0.408650529658024 0.828232421429728 0.17599395 0.34758377 prediction 0.656464842859455 Functional Gain - ADGRG5 ENSG00000159618 CDS Human protein_coding chr16:57601827 chr16:57601828 synonymous SNV . 0 22 hPsi_associated_SNPs_27487 0 0 0 0 1 Ribosome 0.438841775540362 0.438718593011423 0 0 hPsi_site_21211 iPseU_CNN:0;iRNA_PseU:0 21212 chr6 155575646 155575646 1 + G T UCEC 155575647 - 155575627 155575667 41 CAGGCGATCCTTACACGTTTTCTCCAGTGGTAATTCACACT CAGGCGATCCTTACACGTTTTATCCAGTGGTAATTCACACT < 41bp 0.517640473054054 0.845870465422448 0.27613723 0.2892388 prediction 0.65645998473679 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155575647 chr6:155575646 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27488 0 0 0 0 0 Cytosol 0.43871859290595 0.438718564012087 0 0 hPsi_site_21212 iPseU_CNN:0;iRNA_PseU:0 21213 chr1 115576828 115576828 1 + C A UCEC 115576827 + 115576807 115576847 41 ACCAAACCTCAGAAGTCTTATCTGGTAGGATTTTCTGTCTA ACCAAACCTCAGAAGTCTTATATGGTAGGATTTTCTGTCTA < 41bp 0.506349878578258 0.83457352296873 0.21761349 0.21647367 prediction 0.656447288780944 Functional Gain - TSHB ENSG00000134200 CDS Human protein_coding chr1:115576827 chr1:115576828 nonsynonymous SNV 0.235 0 22 hPsi_associated_SNPs_27489 0 0 0 0 0 exosome 0.438718592901107 0.438712611446073 0 0 hPsi_site_21213 iPseU_CNN:0;iRNA_PseU:0 21214 chr19 18119891 18119891 1 + C A UCEC 18119890 + 18119870 18119910 41 GGCAAGGAAGGTGTTCACTGTCATCGAGCCTGTGGACATCA GGCAAGGAAGGTGTTCACTGTAATCGAGCCTGTGGACATCA < 41bp 0.540991640553531 0.869215142889678 0.3387016 0.71919435 prediction 0.656447004672293 Functional Gain - ARRDC2 ENSG00000105643 CDS Human protein_coding chr19:18119890 chr19:18119891 synonymous SNV . 0 22 hPsi_associated_SNPs_27490 0 0 0 0 1 cytosol 0.427938953241706 0.40854596848249 0.4383887 0 hPsi_site_21214 iPseU_CNN:0.4383887;iRNA_PseU:0 21215 chr3 156411884 156411884 1 + G A UCEC 156411883 + 156411863 156411903 41 ATTTGACCAACTACGAAGGCTGTCCACACCACCCTCTAGCA ATTTGACCAACTACGAAGGCTATCCACACCACCCTCTAGCA < 41bp 0.571040023171356 0.899262250665984 0.31816977 0.5532275 prediction 0.656444454989257 Functional Gain - TIPARP ENSG00000163659 CDS Human protein_coding chr3:156411883 chr3:156411884 synonymous SNV . 0 22 hPsi_associated_SNPs_27491 0 0 1 0 2 Nucleus 0.438790306861491 0.438719949365361 0.106455 0 hPsi_site_21215 iPseU_CNN:0.106455;iRNA_PseU:0 21216 chr7 100799988 100799988 1 + C A rs148305541 100799987 + 100799967 100800007 41 GCGCGAGCTCATGCAGGTTGTCCTGGCTCGAAAGCCCAAGA GCGCGAGCTCATGCAGGTTGTACTGGCTCGAAAGCCCAAGA < 41bp 0.548247965262814 0.876470148745333 0.31027293 0.68378145 prediction 0.656444366965038 Functional Gain - AP1S1 ENSG00000106367 CDS Human protein_coding chr7:100799987 chr7:100799988 synonymous SNV . 0 22 hPsi_associated_SNPs_27492 0 0 1 0 1 Ribosome 0.438715284851615 0.438869903381517 0.3675629 0 hPsi_site_21216 iPseU_CNN:0.3675629;iRNA_PseU:0 21217 chr1 13910303 13910303 1 + G A UCEC 13910302 + 13910282 13910322 41 GCCTCCTCGGGAGAGATAAATGCTGACTCCGCTCGGAAAGT GCCTCCTCGGGAGAGATAAATACTGACTCCGCTCGGAAAGT < 41bp 0.443026656626853 0.828218322800417 0.2821553 0.5098065 prediction 0.656436645600834 Functional Gain - PDPN ENSG00000162493 CDS Human protein_coding chr1:13910302 chr1:13910303 nonsynonymous SNV 0.718 2 22 hPsi_associated_SNPs_27493 0 0 0 0 0 Ribosome 0.43878124423409 0.438422604718229 0.0196130000000001 0 hPsi_site_21217 iPseU_CNN:0.0196130000000001;iRNA_PseU:0 21218 chr11 66613686 66613686 1 + G A rs559343173 66613685 + 66613665 66613705 41 CAGGAATTTTTGTAGGGGATTGAAGCCAGAGCTAGTTGCGT CAGGAATTTTTGTAGGGGATTAAAGCCAGAGCTAGTTGCGT < 41bp 0.547379886338599 0.875597288332199 0.60552746 0.7369011 prediction 0.6564348039872 Functional Gain - RCE1 ENSG00000173653 UTR3 Human protein_coding chr11:66613685 chr11:66613686 . . 0 22 hPsi_associated_SNPs_27494 0 0 1 0 0 Ribosome 0.438718593293482 0.438718661132739 0.26274728 0 hPsi_site_21218 iPseU_CNN:0.26274728;iRNA_PseU:0 21219 chr10 45936078 45936078 1 + C A GBM 45936077 + 45936057 45936097 41 GCCTGCTGTGCACCCCATTTTCAAGGTACAGCCAGCTACCG GCCTGCTGTGCACCCCATTTTAAAGGTACAGCCAGCTACCG < 41bp 0.450594922448225 0.828209075920747 0.38818967 0.49409074 prediction 0.656418151841494 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45936077 chr10:45936078 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27495 0 0 0 0 1 Cytosol 0.438034240798308 0.43891933189851 0 0 hPsi_site_21219 iPseU_CNN:0;iRNA_PseU:0 21220 chr10 94834664 94834664 1 + G T UCEC 94834663 + 94834643 94834683 41 CCTCCTGGTCTACCCCGAGGTGAAGCGCCTCATGTTCCGAA CCTCCTGGTCTACCCCGAGGTTAAGCGCCTCATGTTCCGAA < 41bp 0.49423765360091 0.828208821205128 0.4016187 0.66449016 prediction 0.656417642410255 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94834663 chr10:94834664 synonymous SNV . 0 22 hPsi_associated_SNPs_27496 0 0 1 0 0 Endoplasmic reticulum 0.438718592902642 0.438718592999933 0.32898032 0 hPsi_site_21220 iPseU_CNN:0.32898032;iRNA_PseU:0 21221 chr8 65291812 65291812 1 + G A UCEC 65291811 + 65291791 65291831 41 GCGGAGCCTACGGCTGCACTTGAAGGACACCAAAGCATCTC GCGGAGCCTACGGCTGCACTTAAAGGACACCAAAGCATCTC < 41bp 0.464906035195483 0.828208185204592 0.25134087 0.59125817 prediction 0.656416370409185 Functional Gain - MIR124-2 ENSG00000207816 ncRNA_exonic Human miRNA chr8:65291811 chr8:65291812 . . 0 22 hPsi_associated_SNPs_27497 0 0 0 0 0 unknown 0.438718592995375 0.438718588105199 0.18251634 0 hPsi_site_21221 iPseU_CNN:0.18251634;iRNA_PseU:0 21222 chr16 29367157 29367157 1 + G A BLCA 29367156 + 29367136 29367176 41 GGTCCTCAACAAGCACGAGCTGCAAGCGCTTCTACTCCCTG GGTCCTCAACAAGCACGAGCTACAAGCGCTTCTACTCCCTG < 41bp 0.457193531115631 0.82820342211784 0.3687213 0.70903647 prediction 0.65640684423568 Functional Gain - SNX29P2 ENSG00000198106;ENSG00000271699 ncRNA_exonic Human other chr16:29367156 chr16:29367157 . . 0 22 hPsi_associated_SNPs_27498 0 0 0 0 1 unknown 0.434153056955929 0.438504035002968 0.41807294 0 hPsi_site_21222 iPseU_CNN:0.41807294;iRNA_PseU:0 21223 chr14 77242550 77242550 1 + G A SKCM 77242549 + 77242529 77242569 41 GAAGCACTCGGTGCTGGACGTGGAGCGCCTGGGCCGCGATG GAAGCACTCGGTGCTGGACGTAGAGCGCCTGGGCCGCGATG < 41bp 0.569137690187273 0.897340853812497 0.5686432 0.85796154 prediction 0.656406327250449 Functional Gain - VASH1 ENSG00000071246 CDS Human protein_coding chr14:77242549 chr14:77242550 synonymous SNV . 0 22 hPsi_associated_SNPs_27499 0 0 1 0 1 Endoplasmic reticulum 0.438987280004508 0.438742853184228 0.57863668 0 hPsi_site_21223 iPseU_CNN:0.57863668;iRNA_PseU:0 21224 chr12 55715121 55715121 1 + C A LGG 55715120 + 55715100 55715140 41 TTCTTCCCACATGGTTGTTGTCTCCATCTCTTATGGCAGCT TTCTTCCCACATGGTTGTTGTATCCATCTCTTATGGCAGCT < 41bp 0.486856870959171 0.828202873375439 0.20427641 0.2377331 prediction 0.656405746750877 Functional Gain - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55715120 chr12:55715121 synonymous SNV . 0 22 hPsi_associated_SNPs_27500 0 0 0 0 0 unknown 0.438718473844974 0.438718689719394 0 0 hPsi_site_21224 iPseU_CNN:0;iRNA_PseU:0 21225 chr1 32653691 32653691 1 + G A UCEC 32653690 + 32653670 32653710 41 GCAGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCAC GCAGCAAGCTTGAGAGCCTATACCGTGAGCTGCAGCGGCAC < 41bp 0.570964502797316 0.899167206597358 0.217576 0.42750937 prediction 0.656405407600085 Functional Gain - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32653690 chr1:32653691 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_27501 0 0 1 0 1 Nucleus 0.438876671522305 0.438960911388104 0 0 hPsi_site_21225 iPseU_CNN:0;iRNA_PseU:0 21226 chr11 5068297 5068297 1 + G A rs58664826 5068296 + 5068276 5068316 41 ACATAATAGCCCATTCCTACTGTGAGCACATGGGCATTGCA ACATAATAGCCCATTCCTACTATGAGCACATGGGCATTGCA < 41bp 0.549457336023544 0.877659272569096 0.3309384 0.88394725 prediction 0.656403873091104 Functional Gain - OR52J3 ENSG00000205495 CDS Human protein_coding chr11:5068296 chr11:5068297 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27502 0 0 0 0 0 unknown 0.438741671385848 0.438730257045421 0.7678945 0 hPsi_site_21226 iPseU_CNN:0.7678945;iRNA_PseU:0 21227 chr10 95661145 95661145 1 + C A UCEC 95661144 + 95661124 95661164 41 TTTTATCTTTCAGATTATTTTCTTTAATAATGTGCCAACGT TTTTATCTTTCAGATTATTTTATTTAATAATGTGCCAACGT < 41bp 0.519179940455116 0.84738125803525 0.20678207 0.20909247 prediction 0.656402635160268 Functional Gain - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95661144 chr10:95661145 nonsynonymous SNV 0.958 4 22 hPsi_associated_SNPs_27503 0 0 1 0 0 exosome 0.438795950477378 0.438545517679469 0 0 hPsi_site_21227 iPseU_CNN:0;iRNA_PseU:0 21228 chr17 9631380 9631380 1 + G T SARC 9631379 + 9631359 9631399 41 ACCATTCAAGACCATGCCTCTGCGGTGGTCCTTTGGATCCA ACCATTCAAGACCATGCCTCTTCGGTGGTCCTTTGGATCCA < 41bp 0.501085297196414 0.829276542707503 0.25536472 0.28688145 prediction 0.656382491022179 Functional Gain - USP43 ENSG00000154914 CDS Human protein_coding chr17:9631379 chr17:9631380 synonymous SNV . 0 22 hPsi_associated_SNPs_27504 0 0 0 0 0 cytosol 0.438717347485316 0.438779843131264 0 0 hPsi_site_21228 iPseU_CNN:0;iRNA_PseU:0 21229 chr10 102748136 102748136 1 + G A CESC 102748135 + 102748115 102748155 41 ATGCCAGTGTTGCCTGTAACTGCAACTGAAATCCGCCAGTA ATGCCAGTGTTGCCTGTAACTACAACTGAAATCCGCCAGTA < 41bp 0.420986231311354 0.828188041757061 0.21713406 0.31153208 prediction 0.656376083514123 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748135 chr10:102748136 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_27505 0 0 0 0 0 unknown 0.437850061022359 0.437867049154821 0 0 hPsi_site_21229 iPseU_CNN:0;iRNA_PseU:0 21230 chr10 87407067 87407067 1 + G A rs150134091 87407066 + 87407046 87407086 41 GTCCTGCTCCAGGGGGTTGGTGCCCTTGGCTCGGAAGTACT GTCCTGCTCCAGGGGGTTGGTACCCTTGGCTCGGAAGTACT < 41bp 0.562329729173423 0.890516060999232 0.22577405 0.7001185 prediction 0.656372663651618 Functional Gain - GRID1 ENSG00000182771 CDS Human protein_coding chr10:87407066 chr10:87407067 synonymous SNV . 0 22 hPsi_associated_SNPs_27506 0 0 0 0 0 nucleoplasm 0.438718592995102 0.43871859299477 0.400237 0 hPsi_site_21230 iPseU_CNN:0.400237;iRNA_PseU:0 21231 chr17 46198808 46198808 1 + G A rs371253048 46198807 + 46198787 46198827 41 CTTCAGTCTGTGAGGAGGGCTGTGGGAGGAGATCATGCTGT CTTCAGTCTGTGAGGAGGGCTATGGGAGGAGATCATGCTGT < 41bp 0.424652141393448 0.828184176270299 0.2745229 0.32896513 prediction 0.656368352540599 Functional Gain - SNX11 ENSG00000002919 CDS Human protein_coding chr17:46198807 chr17:46198808 nonsynonymous SNV 0.022 1 22 hPsi_associated_SNPs_27507 0 0 1 0 0 Cytosol 0.43871223249686 0.438695216014099 0 0 hPsi_site_21231 iPseU_CNN:0;iRNA_PseU:0 21232 chr9 125562824 125562824 1 + G A UCEC 125562823 + 125562803 125562843 41 CACGAGGATGTCCCGGGCCATGTGCGCAGCCCTGGTGGGAA CACGAGGATGTCCCGGGCCATATGCGCAGCCCTGGTGGGAA < 41bp 0.559782032907424 0.88796548563836 0.28500685 0.36690503 prediction 0.656366905461873 Functional Gain - OR1K1 ENSG00000165204 CDS Human protein_coding chr9:125562823 chr9:125562824 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_27508 0 0 0 0 0 unknown 0.438718592994942 0.438718592995809 0 0 hPsi_site_21232 iPseU_CNN:0;iRNA_PseU:0 21233 chr17 56342193 56342193 1 + C A STAD 56342192 + 56342172 56342212 41 GGATCCCAGAATTTCCAATGTCTTCACCTTCGCCTTCCGCT GGATCCCAGAATTTCCAATGTATTCACCTTCGCCTTCCGCT < 41bp 0.548741525207891 0.876911904246508 0.34829056 0.61647606 prediction 0.656340758077235 Functional Gain - LPO ENSG00000167419 CDS Human protein_coding chr17:56342192 chr17:56342193 synonymous SNV . 0 22 hPsi_associated_SNPs_27509 0 0 0 0 0 cytosol 0.438718590113407 0.438718602800323 0.23295212 0 hPsi_site_21233 iPseU_CNN:0.23295212;iRNA_PseU:0 21234 chr11 75511469 75511469 1 + G A rs34113941 75511468 + 75511448 75511488 41 CATCGACCTGTACCACACCATGTACATGGAGGCCCTGGTGA CATCGACCTGTACCACACCATATACATGGAGGCCCTGGTGA < 41bp 0.425469522531153 0.828163881414 0.24679539 0.36339486 prediction 0.656327762828 Functional Gain - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75511468 chr11:75511469 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27510 0 0 1 0 1 Ribosome 0.438718593224666 0.438718595041496 0 0 hPsi_site_21234 iPseU_CNN:0;iRNA_PseU:0 21235 chrX 47065735 47065735 1 + G A CESC 47065734 + 47065714 47065754 41 CAAAGGCAATGTGCAGGTGGTGATCCCCTTCCTGACAGAGT CAAAGGCAATGTGCAGGTGGTAATCCCCTTCCTGACAGAGT < 41bp 0.400404875447728 0.82816320460299 0.7510283 0.9592495 prediction 0.656326409205981 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47065734 chrX:47065735 synonymous SNV . 0 22 hPsi_associated_SNPs_27511 0 0 1 0 1 Nucleus 0.438735673461091 0.438718592842508 0.4164424 0 hPsi_site_21235 iPseU_CNN:0.4164424;iRNA_PseU:0 21236 chr16 84230684 84230684 1 + G A rs2303245 84230683 + 84230663 84230703 41 AGAACATGGGTTGTGCGGGGTGAAACTGGGGCTGGAGGGAA AGAACATGGGTTGTGCGGGGTAAAACTGGGGCTGGAGGGAA < 41bp 0.509379432306106 0.837542423493009 0.19536662 0.6459345 prediction 0.656325982373806 Functional Gain - ADAD2 ENSG00000140955 UTR3 Human protein_coding chr16:84230683 chr16:84230684 . . 0 22 hPsi_associated_SNPs_27512 0 0 0 0 0 exosome 0.438718592994871 0.438718592995102 0.291869 0 hPsi_site_21236 iPseU_CNN:0.291869;iRNA_PseU:0 21237 chr8 22064921 22064921 1 + G A LUSC 22064920 + 22064900 22064940 41 CCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC CCCGTCCTCGGCCGCTTCTGTAGGAGCAAGAAGCCCGAGCC < 41bp 0.417641586168279 0.828159519155036 0.44873944 0.81466514 prediction 0.656319038310072 Functional Gain - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22064920 chr8:22064921 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_27513 0 0 0 0 0 Endoplasmic reticulum 0.438718313756946 0.438718802024102 0.62933028 0 hPsi_site_21237 iPseU_CNN:0.62933028;iRNA_PseU:0 21238 chr19 35941237 35941237 1 + C A UCEC 35941236 + 35941216 35941256 41 GCGTTTTGTGTGGATCATGCTCTCCCAGCCCCTTGTGGGGG GCGTTTTGTGTGGATCATGCTATCCCAGCCCCTTGTGGGGG < 41bp 0.529657683214659 0.857817019904239 0.4485181 0.74962926 prediction 0.65631867337916 Functional Gain - FFAR2 ENSG00000126262 CDS Human protein_coding chr19:35941236 chr19:35941237 synonymous SNV . 0 22 hPsi_associated_SNPs_27514 0 0 0 0 0 exosome 0.438742514812715 0.442376460135976 0.49925852 0 hPsi_site_21238 iPseU_CNN:0.49925852;iRNA_PseU:0 21239 chr11 18631405 18631405 1 + C T rs143830299 18631406 - 18631386 18631426 41 GAAGCTGAAGAGGCGTTAGCTGCTGCTTTTATTTTTGTGAA GAAGCTGAAGAGGCGTTAGCTACTGCTTTTATTTTTGTGAA < 41bp 0.438214715549072 0.828154817072676 0.20850813 0.34031922 prediction 0.656309634145352 Functional Gain - SPTY2D1-AS1 ENSG00000247595 ncRNA_exonic Human protein_coding chr11:18631406 chr11:18631405 . . 0 22 hPsi_associated_SNPs_27515 0 0 1 6 1 exosome 0.438265255778556 0.438591015488001 0 0 hPsi_site_21239 iPseU_CNN:0;iRNA_PseU:0 21240 chr22 27068153 27068153 1 + C T rs6005125 27068154 - 27068134 27068174 41 AAAACAGGGTTAGTAGGGGCTGGGTTAGTAAGTCAGAGCAC AAAACAGGGTTAGTAGGGGCTAGGTTAGTAAGTCAGAGCAC < 41bp 0.542492266904906 0.870642671432932 0.2168676 0.30308867 prediction 0.656300809056053 Functional Gain - MIAT ENSG00000206028;ENSG00000225783 ncRNA_exonic Human other chr22:27068154 chr22:27068153 . . 0 22 hPsi_associated_SNPs_27516 0 0 0 0 0 unknown 0.438718486264676 0.438720191775906 0 0 hPsi_site_21240 iPseU_CNN:0;iRNA_PseU:0 21241 chr3 51431305 51431305 1 + C A UCEC 51431304 + 51431284 51431324 41 GCGGCTTCTCAGGAACCTGGTCTCCTACTTGAAACAGAAGC GCGGCTTCTCAGGAACCTGGTATCCTACTTGAAACAGAAGC < 41bp 0.520806910030234 0.848953477437732 0.33318105 0.77096605 prediction 0.656293134814998 Functional Gain - RBM15B ENSG00000179837 CDS Human other chr3:51431304 chr3:51431305 synonymous SNV . 0 22 hPsi_associated_SNPs_27517 0 0 1 0 0 Cytosol 0.438718592995135 0.438718592958966 0.5419321 0 hPsi_site_21241 iPseU_CNN:0.5419321;iRNA_PseU:0 21242 chr8 118533268 118533268 1 + C A PRAD 118533267 + 118533247 118533287 41 CGTGTACCGCACCATGGAGATCTTCCAGCTCCTGAGGAACA CGTGTACCGCACCATGGAGATATTCCAGCTCCTGAGGAACA < 41bp 0.477768755021926 0.828144480713377 0.23389918 0.6391139 prediction 0.656288961426755 Functional Gain - MED30 ENSG00000164758 CDS Human protein_coding chr8:118533267 chr8:118533268 synonymous SNV . 0 22 hPsi_associated_SNPs_27518 0 0 1 0 1 Ribosome 0.43871847468766 0.438772963869622 0.2782278 0 hPsi_site_21242 iPseU_CNN:0.2782278;iRNA_PseU:0 21243 chr20 60770987 60770987 1 + G A SKCM 60770986 + 60770966 60771006 41 GGAGGGGACGGAGGCAACGGTGGACACGTCATTCTGAGAGG GGAGGGGACGGAGGCAACGGTAGACACGTCATTCTGAGAGG < 41bp 0.575453813855389 0.903597301812691 0.4699261 0.7475565 prediction 0.656286975914604 Functional Gain - MTG2 ENSG00000101181 CDS Human protein_coding chr20:60770986 chr20:60770987 nonsynonymous SNV 0.156 4 22 hPsi_associated_SNPs_27519 0 0 1 0 0 Ribosome 0.438919972952093 0.438739241981132 0.495113 0 hPsi_site_21243 iPseU_CNN:0.495113;iRNA_PseU:0 21244 chr8 17419551 17419551 1 + G A rs140110447 17419550 + 17419530 17419570 41 GCTCTCCTCGCGCTGTTTCTTGTTCTCTTCGTTGCCATCGT GCTCTCCTCGCGCTGTTTCTTATTCTCTTCGTTGCCATCGT < 41bp 0.57494354615767 0.903083362400197 0.32238823 0.48183733 prediction 0.656279632485053 Functional Gain - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17419550 chr8:17419551 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27520 0 0 1 0 2 Ribosome 0.435449241441802 0.438214552466701 0 0 hPsi_site_21244 iPseU_CNN:0;iRNA_PseU:0 21245 chr7 143771670 143771670 1 + G A SKCM 143771669 + 143771649 143771689 41 CTCCTGGTGGTGATGTCCTATGATCGGTACGTGGCCATCTG CTCCTGGTGGTGATGTCCTATAATCGGTACGTGGCCATCTG < 41bp 0.43633399569103 0.828134185433416 0.23627046 0.59479755 prediction 0.656268370866831 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771669 chr7:143771670 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_27521 0 0 0 0 0 unknown 0.438718949190464 0.43873304285481 0.1895951 0 hPsi_site_21245 iPseU_CNN:0.1895951;iRNA_PseU:0 21246 chr15 40758477 40758477 1 + G A rs12102072 40758476 + 40758456 40758496 41 GGGGGGAGGGCAGGGGCCCCTGTGGGTTCTGGGCTCCAGGG GGGGGGAGGGCAGGGGCCCCTATGGGTTCTGGGCTCCAGGG < 41bp 0.43847645314787 0.828132403268986 0.4979145 0.54401195 prediction 0.656264806537973 Functional Gain - BAHD1 ENSG00000259211 ncRNA_intronic Human antisense chr15:40758476 chr15:40758477 . . 0 22 hPsi_associated_SNPs_27522 0 0 1 0 0 chromatin 0.438718592977216 0.438718592967707 0.0880239 0 hPsi_site_21246 iPseU_CNN:0.0880239;iRNA_PseU:0 21247 chr13 100511253 100511253 1 + C A KIRC 100511252 + 100511232 100511272 41 CTTTTGCAATCCCGGGTCCTTCCTTCCAGCCTGATGCTACC CTTTTGCAATCCCGGGTCCTTACTTCCAGCCTGATGCTACC < 41bp 0.465011637403149 0.828124058864502 0.36230367 0.7081709 prediction 0.656248117729003 Functional Gain - CLYBL ENSG00000125246 CDS Human protein_coding chr13:100511252 chr13:100511253 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_27523 0 0 1 0 1 Ribosome 0.438718592595413 0.4387185929968 0.4163418 0 hPsi_site_21247 iPseU_CNN:0.4163418;iRNA_PseU:0 21248 chr22 24451389 24451389 1 + G A rs184430120 24451388 + 24451368 24451408 41 TGTACAATCATCTCACCACCTGTGAGCCCCCACGTCCCAGC TGTACAATCATCTCACCACCTATGAGCCCCCACGTCCCAGC < 41bp 0.421422809033613 0.828117503190604 0.19798175 0.24534228 prediction 0.656235006381208 Functional Gain - CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24451388 chr22:24451389 nonsynonymous SNV 0.986 4 22 hPsi_associated_SNPs_27524 0 0 1 0 1 Cytosol 0.4387167681959 0.438719652009834 0 0 hPsi_site_21248 iPseU_CNN:0;iRNA_PseU:0 21249 chr1 161495448 161495448 1 + C A GBM 161495447 + 161495427 161495467 41 AAGCTGGACAAGGCCCAGATTCATGACGTCGTCCTGGTGGG AAGCTGGACAAGGCCCAGATTAATGACGTCGTCCTGGTGGG < 41bp 0.527526234503602 0.855631384791387 0.60129184 0.43325156 prediction 0.65621030057557 Functional Gain - HSPA6 ENSG00000173110 CDS Human protein_coding chr1:161495447 chr1:161495448 nonsynonymous SNV 0.914 1 22 hPsi_associated_SNPs_27525 0 0 0 0 0 exosome 0.438718592704839 0.438718592994025 0 0 hPsi_site_21249 iPseU_CNN:0;iRNA_PseU:0 21250 chr14 24438015 24438015 1 + G A BLCA 24438014 + 24437994 24438034 41 ATCGTGTCTTTCCTGTGCTCTGAAGATGCCAGCTACATCAC ATCGTGTCTTTCCTGTGCTCTAAAGATGCCAGCTACATCAC < 41bp 0.420931765034219 0.828094003407884 0.2601989 0.317819 prediction 0.656188006815768 Functional Gain - DHRS4 ENSG00000157326 CDS Human protein_coding chr14:24438014 chr14:24438015 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27526 0 0 0 0 1 Ribosome 0.439379221292125 0.439218013085878 0 0 hPsi_site_21250 iPseU_CNN:0;iRNA_PseU:0 21251 chr16 67235924 67235924 1 + G T SARC 67235923 + 67235903 67235943 41 GGAGCGCGTGCCCCCCGGTCTGCTGGCCCTGGACAACATGT GGAGCGCGTGCCCCCCGGTCTTCTGGCCCTGGACAACATGT < 41bp 0.493503121565453 0.828092661834599 0.22877237 0.30771104 prediction 0.656185323669197 Functional Gain - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67235923 chr16:67235924 synonymous SNV . 0 22 hPsi_associated_SNPs_27527 0 0 0 0 2 Cytosol 0.438712376224005 0.43871975072178 0 0 hPsi_site_21251 iPseU_CNN:0;iRNA_PseU:0 21252 chr10 119303166 119303166 1 + C A LGG 119303165 + 119303145 119303185 41 CTCATCCACCGCTACCGATATCTGGGTCATCGCTTCCAAGG CTCATCCACCGCTACCGATATATGGGTCATCGCTTCCAAGG < 41bp 0.472508238055942 0.828088792003128 0.64992166 0.7857858 prediction 0.656177584006256 Functional Gain - EMX2 ENSG00000170370 CDS Human protein_coding chr10:119303165 chr10:119303166 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27528 0 0 1 0 1 exosome 0.438718686780368 0.438718839668829 0.27172828 0 hPsi_site_21252 iPseU_CNN:0.27172828;iRNA_PseU:0 21253 chr2 9541463 9541463 1 + G A BLCA 9541462 + 9541442 9541482 41 TGTGTGGCTGACAACCCCGATGAGCTCACCTTCTCCGAGGG TGTGTGGCTGACAACCCCGATAAGCTCACCTTCTCCGAGGG < 41bp 0.422790715488395 0.828087313373412 0.31384552 0.56935203 prediction 0.656174626746825 Functional Gain - ASAP2 ENSG00000151693 CDS Human protein_coding chr2:9541462 chr2:9541463 nonsynonymous SNV 0.838 4 22 hPsi_associated_SNPs_27529 0 0 0 0 2 Ribosome 0.435650240876378 0.438703411877025 0.13870406 0 hPsi_site_21253 iPseU_CNN:0.13870406;iRNA_PseU:0 21254 chr9 140137544 140137544 1 + C T UCEC 140137545 - 140137525 140137565 41 TGTTCTTGGCATCAAACATCTGCTGGGTGAGCTCGGGCACG TGTTCTTGGCATCAAACATCTACTGGGTGAGCTCGGGCACG < 41bp 0.426698642434718 0.828087025956227 0.5168305 0.85351133 prediction 0.656174051912454 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137545 chr9:140137544 stopgain 0.998 1 22 hPsi_associated_SNPs_27530 0 0 0 0 0 Cytosol 0.438697018256756 0.438765668469278 0.67336166 0 hPsi_site_21254 iPseU_CNN:0.67336166;iRNA_PseU:0 21255 chr7 128315720 128315720 1 + G A CESC 128315719 + 128315699 128315739 41 CTGACCCATGTACCTGAGGCTGATTTCCAGGTCACTAAGCC CTGACCCATGTACCTGAGGCTAATTTCCAGGTCACTAAGCC < 41bp 0.432384959027937 0.828086842407323 0.24721804 0.5579377 prediction 0.656173684814646 Functional Gain - FAM71F2 ENSG00000205085 CDS Human protein_coding chr7:128315719 chr7:128315720 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_27531 0 0 0 0 0 exosome 0.438713356524909 0.438694114844785 0.1158754 0 hPsi_site_21255 iPseU_CNN:0.1158754;iRNA_PseU:0 21256 chrX 26212607 26212607 1 + C A LUAD 26212606 + 26212586 26212626 41 AGAAGTTTGAGAAGAAAGAGTCCATTTTGAAGGCAGACATG AGAAGTTTGAGAAGAAAGAGTACATTTTGAAGGCAGACATG < 41bp 0.483862039401878 0.828082529820031 0.20261359 0.32267433 prediction 0.656165059640063 Functional Gain - MAGEB6 ENSG00000176746 CDS Human protein_coding chrX:26212606 chrX:26212607 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_27532 0 0 0 0 0 unknown 0.438718304174091 0.4386294601079 0 0 hPsi_site_21256 iPseU_CNN:0;iRNA_PseU:0 21257 chr15 63889856 63889856 1 + G A BLCA 63889855 + 63889835 63889875 41 CGCGTGCAGGTGTGCAGCATTGAGGACTGGCTCAAGAGTGC CGCGTGCAGGTGTGCAGCATTAAGGACTGGCTCAAGAGTGC < 41bp 0.571316621262345 0.899395451605992 0.21502218 0.25129753 prediction 0.656157660687295 Functional Gain - FBXL22 ENSG00000197361 CDS Human protein_coding chr15:63889855 chr15:63889856 nonsynonymous SNV 0.957 3 22 hPsi_associated_SNPs_27533 0 0 0 0 1 Nucleus 0.426150310094956 0.439763583925952 0 0 hPsi_site_21257 iPseU_CNN:0;iRNA_PseU:0 21258 chr3 186790697 186790697 1 + G T BLCA 186790696 + 186790676 186790716 41 TACAATGAAGGAATCCTAATTGTATGGGACCCATCTGTATA TACAATGAAGGAATCCTAATTTTATGGGACCCATCTGTATA < 41bp 0.511445256492316 0.839518607328627 0.45393935 0.62269247 prediction 0.656146701672622 Functional Gain - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186790696 chr3:186790697 nonsynonymous SNV 0.948 0 22 hPsi_associated_SNPs_27534 0 0 1 0 2 Ribosome 0.438718208371251 0.438719562972119 0.24538494 0 hPsi_site_21258 iPseU_CNN:0.24538494;iRNA_PseU:0 21259 chr17 41063341 41063341 1 + C A STAD 41063340 + 41063320 41063360 41 AGTCGAGCTGGTCTTCTACGTCTTGTCCTTCTGCAAGAGTG AGTCGAGCTGGTCTTCTACGTATTGTCCTTCTGCAAGAGTG < 41bp 0.533319193766168 0.861391750664607 0.35245538 0.7078506 prediction 0.656145113796877 Functional Gain - G6PC ENSG00000131482 CDS Human protein_coding chr17:41063340 chr17:41063341 synonymous SNV . 0 22 hPsi_associated_SNPs_27535 0 0 1 0 0 Nucleus 0.442240467893756 0.437951962963102 0.4157012 0 hPsi_site_21259 iPseU_CNN:0.4157012;iRNA_PseU:0 21260 chr14 105394131 105394131 1 + C A UCEC 105394130 + 105394110 105394150 41 AGCCCAAGGACGTGCCCAGGTCCTGGGAGCATGGCTCCAGC AGCCCAAGGACGTGCCCAGGTACTGGGAGCATGGCTCCAGC < 41bp 0.525110490689191 0.853182904483581 0.16963992 0.3779561 prediction 0.65614482758878 Functional Gain - PLD4 ENSG00000166428 CDS Human protein_coding chr14:105394130 chr14:105394131 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_27536 0 0 0 0 1 exosome 0.438720205980248 0.438703214639828 0 0 hPsi_site_21260 iPseU_CNN:0;iRNA_PseU:0 21261 chr22 42049642 42049642 1 + G A UCEC 42049641 + 42049621 42049661 41 CCCTCCTTATTTTGTGGCTTTGGTGCCACAGGAAGAAGAGT CCCTCCTTATTTTGTGGCTTTAGTGCCACAGGAAGAAGAGT < 41bp 0.407247674157308 0.828068867585371 0.09894103 0.3372367 prediction 0.656137735170743 Functional Gain - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42049641 chr22:42049642 synonymous SNV . 0 22 hPsi_associated_SNPs_27537 0 0 1 0 1 Cytosol 0.438718592995102 0.438699446485034 0 0 hPsi_site_21261 iPseU_CNN:0;iRNA_PseU:0 21262 chr1 247769289 247769289 1 + C A LUSC 247769288 + 247769268 247769308 41 CAAACCCCTCCACTATGTAGTCATCATGAACCCACGGCTTT CAAACCCCTCCACTATGTAGTAATCATGAACCCACGGCTTT < 41bp 0.473034398021551 0.82806882747719 0.1753807 0.5970644 prediction 0.656137654954379 Functional Gain - OR2G3 ENSG00000177476 CDS Human protein_coding chr1:247769288 chr1:247769289 synonymous SNV . 0 22 hPsi_associated_SNPs_27538 0 0 0 0 0 unknown 0.438718617815357 0.438718592994301 0.1941288 0 hPsi_site_21262 iPseU_CNN:0.1941288;iRNA_PseU:0 21263 chr17 4621932 4621932 1 + C A UCEC 4621931 + 4621911 4621951 41 ACAGTACGCCGACATCTGCCTCTTCAGCACCGCCCAGTACA ACAGTACGCCGACATCTGCCTATTCAGCACCGCCCAGTACA < 41bp 0.545429473737862 0.873495316069653 0.25144085 0.7197975 prediction 0.656131684663581 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4621931 chr17:4621932 synonymous SNV . 0 22 hPsi_associated_SNPs_27539 0 0 1 0 1 Cytosol 0.43871726380538 0.438718599205731 0.439595 0 hPsi_site_21263 iPseU_CNN:0.439595;iRNA_PseU:0 21264 chr15 74913021 74913021 1 + G A rs534427275 74913020 + 74913000 74913040 41 ACCCACCTCTGCGTCTCATCTGCACACCCCTTCCCAAAGGC ACCCACCTCTGCGTCTCATCTACACACCCCTTCCCAAAGGC < 41bp 0.454173197742554 0.828055709839694 0.312553 0.41604665 prediction 0.656111419679388 Functional Gain - CLK3 ENSG00000179335 intronic Human protein_coding chr15:74913020 chr15:74913021 . . 0 22 hPsi_associated_SNPs_27540 0 0 1 0 0 Nucleus 0.438041863260381 0.438669310238718 0 0 hPsi_site_21264 iPseU_CNN:0;iRNA_PseU:0 21265 chr10 102546746 102546746 1 + G A CESC 102546745 + 102546725 102546765 41 CATTAGAGGAGGTGGAGGTTTGCATCTGGTCTGGACTTTAA CATTAGAGGAGGTGGAGGTTTACATCTGGTCTGGACTTTAA < 41bp 0.44488090490754 0.828051139995383 0.27344698 0.5548299 prediction 0.656102279990765 Functional Gain - PAX2 ENSG00000075891 CDS Human protein_coding chr10:102546745 chr10:102546746 synonymous SNV . 0 22 hPsi_associated_SNPs_27541 0 0 0 0 2 Cytosol 0.438718591677891 0.438718592021342 0.1096598 0 hPsi_site_21265 iPseU_CNN:0.1096598;iRNA_PseU:0 Body mass index 21266 chr2 234869548 234869548 1 + C A COAD 234869547 + 234869527 234869567 41 TGATGTCCTCACTGAACTCTTCTCCAACCACTTCAGCACGC TGATGTCCTCACTGAACTCTTATCCAACCACTTCAGCACGC < 41bp 0.451957515335412 0.828047389557978 0.30234057 0.42866862 prediction 0.656094779115956 Functional Gain - TRPM8 ENSG00000144481 CDS Human protein_coding chr2:234869547 chr2:234869548 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27542 0 0 0 0 0 exosome 0.438718962442869 0.438759485136962 0 0 hPsi_site_21266 iPseU_CNN:0;iRNA_PseU:0 21267 chr12 51354842 51354842 1 + G A rs145639855 51354841 + 51354821 51354861 41 GTCAATTCATCTTATTCACATGAGAGTTGCTGCCCAAGGAT GTCAATTCATCTTATTCACATAAGAGTTGCTGCCCAAGGAT < 41bp 0.431592654172931 0.828046215657085 0.23630187 0.2785405 prediction 0.65609243131417 Functional Gain - HIGD1C ENSG00000214511 CDS Human protein_coding chr12:51354841 chr12:51354842 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_27543 0 0 0 0 2 exosome 0.438718603450317 0.438722448258727 0 0 hPsi_site_21267 iPseU_CNN:0;iRNA_PseU:0 21268 chr4 69078159 69078159 1 + C A UCEC 69078158 + 69078138 69078178 41 AAACACAAGAAGGGCAATCATCCATAGTGACACAGATGTAC AAACACAAGAAGGGCAATCATACATAGTGACACAGATGTAC < 41bp 0.516458367431809 0.844497165357639 0.18003494 0.17212978 prediction 0.656077595851661 Functional Gain - FTLP10;TMPRSS11BNL ENSG00000226894 CDS Human other chr4:69078158 chr4:69078159 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_27544 0 0 0 1 0 unknown 0.438266313237861 0.438892766005414 0 0 hPsi_site_21268 iPseU_CNN:0;iRNA_PseU:0 21269 chr11 118403765 118403765 1 + G T LUAD 118403764 + 118403744 118403784 41 GATCGACCAGGATGGGCCAGTGACTGTCAACACCTCTGACT GATCGACCAGGATGGGCCAGTTACTGTCAACACCTCTGACT < 41bp 0.50676672662124 0.834804141228382 0.19969857 0.3037508 prediction 0.656074829214283 Functional Gain - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118403764 chr11:118403765 synonymous SNV . 0 22 hPsi_associated_SNPs_27545 0 0 0 0 0 Nucleus 0.438718895671508 0.438719524919248 0 0 hPsi_site_21269 iPseU_CNN:0;iRNA_PseU:0 21270 chrX 100808896 100808896 1 + C A UCEC 100808895 + 100808875 100808915 41 ACCAACATTTGCTTTCCTATTCTTTTCCAGACTTTTTTGCT ACCAACATTTGCTTTCCTATTATTTTCCAGACTTTTTTGCT < 41bp 0.495572162184811 0.828036511495221 0.24023426 0.334128 prediction 0.656073022990442 Functional Gain - ARMCX1 ENSG00000126947 CDS Human protein_coding chrX:100808895 chrX:100808896 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27546 0 0 0 0 0 exosome 0.439277725032536 0.435545812683731 0 0 hPsi_site_21270 iPseU_CNN:0;iRNA_PseU:0 21271 chr16 30007706 30007706 1 + C A UCEC 30007705 + 30007685 30007725 41 GAAGCGGAAGCTCAAGTTCCTCATCTACGTGAGTGCTGCCG GAAGCGGAAGCTCAAGTTCCTAATCTACGTGAGTGCTGCCG < 41bp 0.482972326239864 0.828032843214213 0.29722524 0.63861877 prediction 0.656065686428426 Functional Gain - INO80E ENSG00000169592 CDS Human protein_coding chr16:30007705 chr16:30007706 synonymous SNV . 0 22 hPsi_associated_SNPs_27547 0 0 1 1 1 Cytosol 0.438667796026463 0.438717544977765 0.27723754 0 hPsi_site_21271 iPseU_CNN:0.27723754;iRNA_PseU:0 21272 chr20 54824625 54824625 1 + C A UCEC 54824624 + 54824604 54824644 41 CTCATGCATGAAGGGGGCAGTCACCATCACCATTCTCCTGG CTCATGCATGAAGGGGGCAGTAACCATCACCATTCTCCTGG < 41bp 0.494767364222094 0.828031663815187 0.15993875 0.36739743 prediction 0.656063327630374 Functional Gain - MC3R ENSG00000124089 CDS Human protein_coding chr20:54824624 chr20:54824625 synonymous SNV . 0 22 hPsi_associated_SNPs_27548 0 0 0 0 0 unknown 0.438718592995113 0.438718592995102 0 0 hPsi_site_21272 iPseU_CNN:0;iRNA_PseU:0 21273 chr11 77884871 77884871 1 + G A HNSC 77884870 + 77884850 77884890 41 TGTTCATAAAATCCAGAGCATGTGGGTGAGAAGAATCGATG TGTTCATAAAATCCAGAGCATATGGGTGAGAAGAATCGATG < 41bp 0.437381574876728 0.82802454500842 0.20171475 0.28687972 prediction 0.656049090016841 Functional Gain - KCTD21 ENSG00000188997 CDS Human protein_coding chr11:77884870 chr11:77884871 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_27549 0 0 0 0 1 Cytosol 0.438718592983724 0.438718592987115 0 0 hPsi_site_21273 iPseU_CNN:0;iRNA_PseU:0 21274 chr17 47592306 47592306 1 + G A rs11466174 47592305 + 47592285 47592325 41 CCTCCTGTGTAATCATTTCTTGGGCCCTCCTGAAACTTACA CCTCCTGTGTAATCATTTCTTAGGCCCTCCTGAAACTTACA < 41bp 0.502342521603101 0.830364286008584 0.18610561 0.34638706 prediction 0.656043528810966 Functional Gain - LOC100288866 ENSG00000249906 ncRNA_intronic Human antisense chr17:47592305 chr17:47592306 . . 0 22 hPsi_associated_SNPs_27550 0 0 1 0 0 unknown 0.438718593006901 0.43871848470071 0 0 hPsi_site_21274 iPseU_CNN:0;iRNA_PseU:0 21275 chr5 6751185 6751185 1 + G A OV 6751184 + 6751164 6751204 41 CCGCCCTGCACAACGCCCAGTGTTTACCAGTTCAGTCTGCA CCGCCCTGCACAACGCCCAGTATTTACCAGTTCAGTCTGCA < 41bp 0.394910692880634 0.828020199302677 0.14826462 0.20006838 prediction 0.656040398605354 Functional Gain - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6751184 chr5:6751185 nonsynonymous SNV 0.695 0 22 hPsi_associated_SNPs_27551 0 0 1 0 1 Nucleus 0.438699776298102 0.438711286918118 0 0 hPsi_site_21275 iPseU_CNN:0;iRNA_PseU:0 21276 chr15 69238449 69238449 1 + C A UCEC 69238448 + 69238428 69238468 41 TAAGAGCACTGGCATTGGGATCTCTACAGAATCAGAAGATG TAAGAGCACTGGCATTGGGATATCTACAGAATCAGAAGATG < 41bp 0.483340005025448 0.828016074379767 0.33363816 0.31828168 prediction 0.656032148759534 Functional Gain - SPESP1 ENSG00000258484 CDS Human protein_coding chr15:69238448 chr15:69238449 synonymous SNV . 0 22 hPsi_associated_SNPs_27552 0 0 0 0 0 exosome 0.438718897904532 0.438718576494113 0 0 hPsi_site_21276 iPseU_CNN:0;iRNA_PseU:0 21277 chr1 158725174 158725174 1 + G A SKCM 158725173 + 158725153 158725193 41 TTGTGCTTCCTGAGATTGCATGGATTTCCACCTTGCCTTTC TTGTGCTTCCTGAGATTGCATAGATTTCCACCTTGCCTTTC < 41bp 0.557777650324877 0.885792403781684 0.13620275 0.1564416 prediction 0.656029506913613 Functional Gain - OR6K6 ENSG00000180433 CDS Human protein_coding chr1:158725173 chr1:158725174 stopgain 0.925 1 22 hPsi_associated_SNPs_27553 0 0 0 0 0 unknown 0.438718593002647 0.438718553007824 0 0 hPsi_site_21277 iPseU_CNN:0;iRNA_PseU:0 21278 chr15 39545163 39545163 1 + G A rs143583565 39545162 + 39545142 39545182 41 TTTGAACATTTGATGATTTTTGCAGGAGACTGGGTGAACAA TTTGAACATTTGATGATTTTTACAGGAGACTGGGTGAACAA < 41bp 0.468818290901794 0.828009985844444 0.22528106 0.5222939 prediction 0.656019971688889 Functional Gain - C15orf54 ENSG00000259345 ncRNA_intronic Human lincRNA chr15:39545162 chr15:39545163 . . 0 22 hPsi_associated_SNPs_27554 0 0 0 0 0 unknown 0.437997200044618 0.438716445737048 0.0445878 0 hPsi_site_21278 iPseU_CNN:0.0445878;iRNA_PseU:0 21279 chr12 120995377 120995377 1 + G T LUAD 120995376 + 120995356 120995396 41 GCCACAGAGTCACATCAGTATGTTGTTGGTGATACCATTAC GCCACAGAGTCACATCAGTATTTTGTTGGTGATACCATTAC < 41bp 0.495560979362224 0.828009401658355 0.24422094 0.25603557 prediction 0.656018803316709 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:120995376 chr12:120995377 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27555 0 0 1 0 0 Ribosome 0.43875686392938 0.438788402255734 0 0 hPsi_site_21279 iPseU_CNN:0;iRNA_PseU:0 21280 chr12 57865314 57865314 1 + C A UCEC 57865313 + 57865293 57865333 41 TCCTACCAGAGTCCCAAGTTTCTGGGGGGTTCCCAGGTTAG TCCTACCAGAGTCCCAAGTTTATGGGGGGTTCCCAGGTTAG < 41bp 0.457445738580114 0.828007256781092 0.27539045 0.6294667 prediction 0.656014513562183 Functional Gain - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57865313 chr12:57865314 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_27556 0 0 0 0 0 nucleoplasm 0.438718592995102 0.438718609162275 0.2589334 0 hPsi_site_21280 iPseU_CNN:0.2589334;iRNA_PseU:0 21281 chr8 67790883 67790883 1 + C A UCEC 67790882 + 67790862 67790902 41 AGAAATGACTTTTTGTGTAATCTATGTGCATCTTCACTTCA AGAAATGACTTTTTGTGTAATATATGTGCATCTTCACTTCA < 41bp 0.474612007503956 0.828000256759929 0.29615018 0.38313192 prediction 0.656000513519859 Functional Gain - MCMDC2 ENSG00000178460 CDS Human protein_coding chr8:67790882 chr8:67790883 nonsynonymous SNV 0.841 1 22 hPsi_associated_SNPs_27557 0 0 0 0 2 nucleoplasm 0.438887290485898 0.439566833156478 0 0 hPsi_site_21281 iPseU_CNN:0;iRNA_PseU:0 21282 chr4 1804679 1804679 1 + C A BLCA 1804678 + 1804658 1804698 41 TGTGGAGGCCGACGTGCGCCTCCGCCTGGCCAATGTGTCGG TGTGGAGGCCGACGTGCGCCTACGCCTGGCCAATGTGTCGG < 41bp 0.473963117452285 0.828000177373046 0.1823251 0.6816405 prediction 0.656000354746093 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1804678 chr4:1804679 synonymous SNV . 0 22 hPsi_associated_SNPs_27558 0 0 1 0 1 Ribosome 0.438718588769987 0.438718591044261 0.363281 0 hPsi_site_21282 iPseU_CNN:0.363281;iRNA_PseU:0 21283 chr18 28971092 28971092 1 + G A UCEC 28971091 + 28971071 28971111 41 GGCTCAGATCGGGATGGAGCTGCAGATGGACTGTCTTCTGA GGCTCAGATCGGGATGGAGCTACAGATGGACTGTCTTCTGA < 41bp 0.40817286221413 0.827997098413854 0.28250352 0.44264987 prediction 0.655994196827708 Functional Gain - DSG4 ENSG00000175065 CDS Human protein_coding chr18:28971091 chr18:28971092 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_27559 0 0 0 0 2 exosome 0.438719982365573 0.438671561229022 0 0 hPsi_site_21283 iPseU_CNN:0;iRNA_PseU:0 21284 chr8 56723472 56723472 1 + G T LUAD 56723471 + 56723451 56723491 41 GATATCGATCCTGTTAAGATTGCCCTTGCTCGCAATAATGC GATATCGATCCTGTTAAGATTTCCCTTGCTCGCAATAATGC < 41bp 0.499507116283263 0.827986549750653 0.19587666 0.24594098 prediction 0.655973099501306 Functional Gain - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56723471 chr8:56723472 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27560 0 0 1 0 1 Nucleus 0.433961437602314 0.437742416263059 0 0 hPsi_site_21284 iPseU_CNN:0;iRNA_PseU:0 21285 chr9 4585378 4585378 1 + C A UCEC 4585377 + 4585357 4585397 41 GACGGGCATTGTGGAAAAGCTCTCCAAGAAGGAGCTGGAGC GACGGGCATTGTGGAAAAGCTATCCAAGAAGGAGCTGGAGC < 41bp 0.517424583432739 0.845411009469511 0.28799978 0.38539544 prediction 0.655972852073543 Functional Gain - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585377 chr9:4585378 synonymous SNV . 0 22 hPsi_associated_SNPs_27561 0 0 0 0 1 chromatin 0.438720883596069 0.438718618552774 0 0 hPsi_site_21285 iPseU_CNN:0;iRNA_PseU:0 21286 chr10 131943578 131943578 1 + G A COAD 131943577 + 131943557 131943597 41 GAACTCCCTCAAGTTTCATTTGTGAAGGTATTTATATTTCA GAACTCCCTCAAGTTTCATTTATGAAGGTATTTATATTTCA < 41bp 0.554085724637464 0.882071984493427 0.17945057 0.17158088 prediction 0.655972519711926 Functional Gain - GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131943577 chr10:131943578 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_27562 0 0 1 0 1 Cytosol 0.43845329463892 0.43850162490747 0 0 hPsi_site_21286 iPseU_CNN:0;iRNA_PseU:0 21287 chr1 116562275 116562275 1 + G A HNSC 116562274 + 116562254 116562294 41 TTCTTCAGTGGTGTATTTGTTGGAGTTATCTCTTTTGGTCA TTCTTCAGTGGTGTATTTGTTAGAGTTATCTCTTTTGGTCA < 41bp 0.568322018708385 0.896306183359765 0.44434574 0.6104008 prediction 0.65596832930276 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116562274 chr1:116562275 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27563 0 0 0 0 2 cytosol 0.437696753819004 0.442982028639848 0.2208016 0 hPsi_site_21287 iPseU_CNN:0.2208016;iRNA_PseU:0 21288 chr1 78478968 78478968 1 + G T PRAD 78478967 + 78478947 78478987 41 TATCCAAGAGACAGGAATTCTGTGGGGCCATCCCGCCTCAA TATCCAAGAGACAGGAATTCTTTGGGGCCATCCCGCCTCAA < 41bp 0.498965110440973 0.827983214615812 0.49734467 0.8105614 prediction 0.655966429231625 Functional Gain - DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78478967 chr1:78478968 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27564 0 0 0 0 0 nucleoplasm 0.438718592993709 0.43871859299509 0.6211228 0 hPsi_site_21288 iPseU_CNN:0.6211228;iRNA_PseU:0 21289 chr16 14041854 14041854 1 + C A UCEC 14041853 + 14041833 14041873 41 CACTTCCCCAGACTACGGATTCTCTGGTGCCCCTCTCCTCA CACTTCCCCAGACTACGGATTATCTGGTGCCCCTCTCCTCA < 41bp 0.471598315105946 0.827981549731917 0.7297834 0.77082634 prediction 0.655963099463833 Functional Gain - ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14041853 chr16:14041854 nonsynonymous SNV 0.973 1 22 hPsi_associated_SNPs_27565 0 0 1 0 0 Nucleus 0.438716342850204 0.43855115477855 0.0820858800000002 0 hPsi_site_21289 iPseU_CNN:0.0820858800000002;iRNA_PseU:0 21290 chr9 125486895 125486895 1 + G A CESC 125486894 + 125486874 125486914 41 TGAGACCTTAGCTGTCATTGTGACCCCCTTCCTGTGTACCA TGAGACCTTAGCTGTCATTGTAACCCCCTTCCTGTGTACCA < 41bp 0.559749717832924 0.887728846904133 0.25711244 0.6977668 prediction 0.655958258142417 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125486894 chr9:125486895 synonymous SNV . 0 22 hPsi_associated_SNPs_27566 0 0 0 0 0 unknown 0.438819360317219 0.438712560557352 0.3955336 0 hPsi_site_21290 iPseU_CNN:0.3955336;iRNA_PseU:0 21291 chr6 121768351 121768351 1 + G A GBM 121768350 + 121768330 121768370 41 CTCAAGGTTGCCCAAACTGATGGTGTCAATGTGGACATGCA CTCAAGGTTGCCCAAACTGATAGTGTCAATGTGGACATGCA < 41bp 0.423220328640307 0.827974454476079 0.2620314 0.35237715 prediction 0.655948908952158 Functional Gain - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121768350 chr6:121768351 nonsynonymous SNV 0.024 1 22 hPsi_associated_SNPs_27567 0 0 1 0 0 Endoplasmic reticulum 0.438602324350101 0.442827184102661 0 0 hPsi_site_21291 iPseU_CNN:0;iRNA_PseU:0 21292 chr11 119052990 119052990 1 + G A LIHC 119052989 + 119052969 119053009 41 AACGTGGCGTACAACGGTGCTGGTGACACAGCGGCCCTGGC AACGTGGCGTACAACGGTGCTAGTGACACAGCGGCCCTGGC < 41bp 0.40959380021041 0.827965369399205 0.34644318 0.6082165 prediction 0.655930738798411 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119052989 chr11:119052990 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_27568 0 0 0 0 1 exosome 0.438689226186801 0.43913010094521 0.216433 0 hPsi_site_21292 iPseU_CNN:0.216433;iRNA_PseU:0 21293 chr3 183955061 183955061 1 + C A rs73887403 183955060 + 183955040 183955080 41 GGAGCCTGCTTTGAGTGACATCTCTGTGGACTGGTTTGTGC GGAGCCTGCTTTGAGTGACATATCTGTGGACTGGTTTGTGC < 41bp 0.455491150435409 0.827954030682827 0.24664229 0.34038806 prediction 0.655908061365655 Functional Gain - VWA5B2 ENSG00000145198 CDS Human protein_coding chr3:183955060 chr3:183955061 synonymous SNV . 0 22 hPsi_associated_SNPs_27569 0 0 0 0 1 exosome 0.438716448043894 0.438718575073822 0 0 hPsi_site_21293 iPseU_CNN:0;iRNA_PseU:0 21294 chr15 100379080 100379080 1 + G A rs12148499 100379079 + 100379059 100379099 41 TCAACACTCAGAGAATGTTTTGAATTCACATTTCTGCCATC TCAACACTCAGAGAATGTTTTAAATTCACATTTCTGCCATC < 41bp 0.482789205257316 0.827953996937441 0.24712202 0.4148531 prediction 0.655907993874882 Functional Gain - LOC400464 ENSG00000259363 UTR3 Human lincRNA chr15:100379079 chr15:100379080 . . 0 22 hPsi_associated_SNPs_27570 0 0 0 0 0 unknown 0.43862974178673 0.43871880827679 0 0 hPsi_site_21294 iPseU_CNN:0;iRNA_PseU:0 21295 chr17 27062387 27062387 1 + G A LUAD 27062386 + 27062366 27062406 41 CTCAAGAGGGCTTTCGAGGCTGCGGTGAGTGTATGCACCCT CTCAAGAGGGCTTTCGAGGCTACGGTGAGTGTATGCACCCT < 41bp 0.414570287445483 0.827953600915324 0.30341354 0.6694879 prediction 0.655907201830648 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27062386 chr17:27062387 nonsynonymous SNV 0.273 1 22 hPsi_associated_SNPs_27571 0 0 1 0 1 Nucleus 0.438718593166439 0.438718601546223 0.3389758 0 hPsi_site_21295 iPseU_CNN:0.3389758;iRNA_PseU:0 21296 chr19 41135362 41135362 1 + C A BLCA 41135361 + 41135341 41135381 41 GTGCGTCAACGCGCGTTGCCTCAACACGGATGGCTCCTTCC GTGCGTCAACGCGCGTTGCCTAAACACGGATGGCTCCTTCC < 41bp 0.504664299382233 0.832614298129222 0.35419428 0.43727666 prediction 0.655899997493977 Functional Gain - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41135361 chr19:41135362 synonymous SNV . 0 22 hPsi_associated_SNPs_27572 0 0 1 0 1 Cytosol 0.440917964791152 0.438743422505485 0 0 hPsi_site_21296 iPseU_CNN:0;iRNA_PseU:0 21297 chr10 104160128 104160128 1 + G A SKCM 104160127 + 104160107 104160147 41 CCAGCTCTGCTGGATCGGCATGGAGACTCAGCCATGCATCT CCAGCTCTGCTGGATCGGCATAGAGACTCAGCCATGCATCT < 41bp 0.40726832627239 0.827948454135516 0.26393476 0.46943322 prediction 0.655896908271032 Functional Gain - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160127 chr10:104160128 nonsynonymous SNV 0.929 4 22 hPsi_associated_SNPs_27573 0 0 0 0 1 chromatin 0.438661635193757 0.438718655549008 0 0 hPsi_site_21297 iPseU_CNN:0;iRNA_PseU:0 21298 chr11 134163058 134163058 1 + G A DLBC 134163057 + 134163037 134163077 41 AGTGTTGGCCGCCATCAATTTGCAAAAACTTCACCAGGATA AGTGTTGGCCGCCATCAATTTACAAAAACTTCACCAGGATA < 41bp 0.413455886167414 0.827948144868324 0.30911595 0.72676885 prediction 0.655896289736647 Functional Gain - GLB1L3 ENSG00000166105 CDS Human protein_coding chr11:134163057 chr11:134163058 synonymous SNV . 0 22 hPsi_associated_SNPs_27574 0 0 0 0 1 Nucleus 0.438696145173949 0.438717652590407 0.4535377 0 hPsi_site_21298 iPseU_CNN:0.4535377;iRNA_PseU:0 21299 chr14 104643666 104643666 1 + C A LGG 104643665 + 104643645 104643685 41 GGTCGCGGGCTCTGGGGCCTTCGGTGAAGCTGTCTACGGCC GGTCGCGGGCTCTGGGGCCTTAGGTGAAGCTGTCTACGGCC < 41bp 0.513312503127133 0.841258839403944 0.2576982 0.6529327 prediction 0.655892672553622 Functional Gain - KIF26A ENSG00000066735 CDS Human protein_coding chr14:104643665 chr14:104643666 stopgain 0.004 0 22 hPsi_associated_SNPs_27575 0 0 1 0 0 Ribosome 0.438728259509163 0.438673825899154 0.3058654 0 hPsi_site_21299 iPseU_CNN:0.3058654;iRNA_PseU:0 Blood metabolite levels 21300 chr6 26598290 26598290 1 + G T UCEC 26598289 + 26598269 26598309 41 CAGTCTACACAACACGCCTATGGGTGCCCGCAGGCGCAGCC CAGTCTACACAACACGCCTATTGGTGCCCGCAGGCGCAGCC < 41bp 0.501581735373668 0.829527441911472 0.29296014 0.3436327 prediction 0.655891413075609 Functional Gain - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598289 chr6:26598290 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27576 0 0 1 0 1 Ribosome 0.438731824348223 0.438934153103279 0 0 hPsi_site_21300 iPseU_CNN:0;iRNA_PseU:0 21301 chr16 30749840 30749840 1 + G A PRAD 30749839 + 30749819 30749859 41 CCACCCCAGCAGCCCTTCATTGCTCGCCGTCACATTGAGCT CCACCCCAGCAGCCCTTCATTACTCGCCGTCACATTGAGCT < 41bp 0.465019573281854 0.82794347121908 0.25451154 0.62440866 prediction 0.65588694243816 Functional Gain - SRCAP ENSG00000080603 CDS Human protein_coding chr16:30749839 chr16:30749840 nonsynonymous SNV 0.883 5 22 hPsi_associated_SNPs_27577 0 0 1 0 0 Ribosome 0.43880196797436 0.439828033293371 0.24881732 0 hPsi_site_21301 iPseU_CNN:0.24881732;iRNA_PseU:0 21302 chr11 5968952 5968952 1 + C A LUAD 5968951 + 5968931 5968971 41 TTCATGGTCATGGCCTATGATCGTTATGTAGCCATCTGCCA TTCATGGTCATGGCCTATGATAGTTATGTAGCCATCTGCCA < 41bp 0.519711038275293 0.847647431943955 0.17169431 0.1942454 prediction 0.655872787337323 Functional Gain - OR56A3 ENSG00000184478 CDS Human protein_coding chr11:5968951 chr11:5968952 nonsynonymous SNV 0.068 2 22 hPsi_associated_SNPs_27578 0 0 0 0 0 unknown 0.448939506162036 0.43886187620367 0 0 hPsi_site_21302 iPseU_CNN:0;iRNA_PseU:0 21303 chr11 123811094 123811094 1 + C A LUSC 123811093 + 123811073 123811113 41 CTTTGTGCCTTGCATCTACGTCTATACAAGGCCTTTTCGGA CTTTGTGCCTTGCATCTACGTATATACAAGGCCTTTTCGGA < 41bp 0.482893243034998 0.82793438940854 0.30357203 0.6084342 prediction 0.655868778817081 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123811093 chr11:123811094 synonymous SNV . 0 22 hPsi_associated_SNPs_27579 0 0 0 0 0 exosome 0.438700349321832 0.438710643230999 0.2168684 0 hPsi_site_21303 iPseU_CNN:0.2168684;iRNA_PseU:0 21304 chr7 141619083 141619083 1 + G A SKCM 141619082 + 141619062 141619102 41 TCTGAGGTACAACATCATTATGAACAGACACACCTGCAACT TCTGAGGTACAACATCATTATAAACAGACACACCTGCAACT < 41bp 0.435747263775343 0.827932834089941 0.20369115 0.45976222 prediction 0.655865668179882 Functional Gain - OR9A4 ENSG00000258083 CDS Human protein_coding chr7:141619082 chr7:141619083 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_27580 0 0 0 0 0 unknown 0.438667304940996 0.438571999889871 0 0 hPsi_site_21304 iPseU_CNN:0;iRNA_PseU:0 21305 chr8 87563426 87563426 1 + C A LIHC 87563425 + 87563405 87563445 41 TGACAGGTATCACATGAATTTCCAATGAACTTCAACCCATC TGACAGGTATCACATGAATTTACAATGAACTTCAACCCATC < 41bp 0.531478011996182 0.859410109380695 0.35678196 0.5155305 prediction 0.655864194769027 Functional Gain - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87563425 chr8:87563426 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27581 0 0 1 0 2 Nucleus 0.438716750215744 0.435538334201501 0.031061 0 hPsi_site_21305 iPseU_CNN:0.031061;iRNA_PseU:0 21306 chr9 130169437 130169437 1 + G A KIRC 130169436 + 130169416 130169456 41 TCTGGCTTGCCTCCGCTTTCTGCATCTTCAGTGTCCTTTTC TCTGGCTTGCCTCCGCTTTCTACATCTTCAGTGTCCTTTTC < 41bp 0.428335406360867 0.827931863898727 0.3224025 0.59778285 prediction 0.655863727797454 Functional Gain - SLC2A8 ENSG00000136856 CDS Human protein_coding chr9:130169436 chr9:130169437 nonsynonymous SNV 0.838 4 22 hPsi_associated_SNPs_27582 0 0 1 0 1 Endoplasmic reticulum 0.438424994232949 0.438739408061916 0.1955657 0 hPsi_site_21306 iPseU_CNN:0.1955657;iRNA_PseU:0 21307 chr5 43280727 43280727 1 + G A UCEC 43280726 + 43280706 43280746 41 AGGAAGAAGGCTTTGGAAAGTGTCCCAGTCATGATGCTACC AGGAAGAAGGCTTTGGAAAGTATCCCAGTCATGATGCTACC < 41bp 0.566850225758955 0.894779463360307 0.31441525 0.62559485 prediction 0.655858475202703 Functional Gain - NIM1K ENSG00000177453 CDS Human protein_coding chr5:43280726 chr5:43280727 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_27583 0 0 0 0 0 exosome 0.438718592749754 0.438718592994959 0.2511897 0 hPsi_site_21307 iPseU_CNN:0.2511897;iRNA_PseU:0 21308 chr9 36169514 36169514 1 + C A BRCA 36169513 + 36169493 36169533 41 AGGCACCATGAAATTGGAATTCACGGAGAAAAACTACAATA AGGCACCATGAAATTGGAATTAACGGAGAAAAACTACAATA < 41bp 0.503595460490573 0.831520808639153 0.29719803 0.5402172 prediction 0.65585069629716 Functional Gain - CCIN ENSG00000185972 CDS Human protein_coding chr9:36169513 chr9:36169514 nonsynonymous SNV 0.984 2 22 hPsi_associated_SNPs_27584 0 0 0 0 0 exosome 0.438680158060402 0.438718649060081 0.0804343999999999 0 hPsi_site_21308 iPseU_CNN:0.0804343999999999;iRNA_PseU:0 21309 chr7 75517580 75517580 1 + G A rs372147983 75517579 + 75517559 75517599 41 CATCCAGCCCCCCACGCCTGTGAACAGCCCTGGCACGGTGT CATCCAGCCCCCCACGCCTGTAAACAGCCCTGGCACGGTGT < 41bp 0.422429208282977 0.827924034293423 0.21623185 0.29364812 prediction 0.655848068586845 Functional Gain - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517579 chr7:75517580 synonymous SNV . 0 22 hPsi_associated_SNPs_27585 0 0 1 0 0 Endoplasmic reticulum 0.438651294895219 0.43871811207474 0 0 hPsi_site_21309 iPseU_CNN:0;iRNA_PseU:0 21310 chr22 41489026 41489026 1 + G A BRCA 41489025 + 41489005 41489045 41 AAAAATGGCCGAGAATGTGGTGGAACCGGGGCCGCCTTCAG AAAAATGGCCGAGAATGTGGTAGAACCGGGGCCGCCTTCAG < 41bp 0.434325002434248 0.827923650045894 0.24352998 0.5731009 prediction 0.655847300091788 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41489025 chr22:41489026 synonymous SNV . 0 22 hPsi_associated_SNPs_27586 0 0 1 0 1 Cytosol 0.438718593025032 0.438718592995102 0.1462018 0 hPsi_site_21310 iPseU_CNN:0.1462018;iRNA_PseU:0 21311 chr11 64074935 64074935 1 + C A KIRP 64074934 + 64074914 64074954 41 GCTACCACTATGGTGTGGCATCCTGTGAGGCCTGCAAAGCC GCTACCACTATGGTGTGGCATACTGTGAGGCCTGCAAAGCC < 41bp 0.524906692716113 0.852826581577081 0.3255997 0.49198216 prediction 0.655839777721935 Functional Gain - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64074934 chr11:64074935 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_27587 0 0 0 0 0 Cytosol 0.43871437088452 0.438726299408104 0 0 hPsi_site_21311 iPseU_CNN:0;iRNA_PseU:0 21312 chr1 2087466 2087466 1 + G A UCEC 2087465 + 2087445 2087485 41 GGTACAGACAGAGAAGCACGTGTTTGAGCAGGCATCCAGCA GGTACAGACAGAGAAGCACGTATTTGAGCAGGCATCCAGCA < 41bp 0.573977786605175 0.901886452981698 0.29061013 0.6456055 prediction 0.655817332753045 Functional Gain - PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2087465 chr1:2087466 synonymous SNV . 0 22 hPsi_associated_SNPs_27588 0 0 1 1 2 Ribosome 0.438770150682639 0.438720188369248 0.291211 0 hPsi_site_21312 iPseU_CNN:0.291211;iRNA_PseU:0 21313 chr2 103006577 103006577 1 + C A COAD 103006576 + 103006556 103006596 41 AATGATCATAGCTGTTTTGATCTTGGTGGCAGTAGTGTGCC AATGATCATAGCTGTTTTGATATTGGTGGCAGTAGTGTGCC < 41bp 0.468300480596807 0.82790721703259 0.2838983 0.45211688 prediction 0.655814434065179 Functional Gain - IL18R1 ENSG00000115604 CDS Human protein_coding chr2:103006576 chr2:103006577 synonymous SNV . 0 22 hPsi_associated_SNPs_27589 0 0 0 0 2 Nucleus 0.438756739076619 0.438573444444156 0 0 hPsi_site_21313 iPseU_CNN:0;iRNA_PseU:0 21314 chr12 98995408 98995408 1 + C A rs74604883 98995407 + 98995387 98995427 41 CAGTGTAGGAAATTGTCTATTCCTGATATAATTACTGTAGT CAGTGTAGGAAATTGTCTATTACTGATATAATTACTGTAGT < 41bp 0.497812172832445 0.827906404870291 0.2106438 0.26172447 prediction 0.655812809740583 Functional Gain - SLC25A3 ENSG00000075415 UTR3 Human protein_coding chr12:98995407 chr12:98995408 . . 0 22 hPsi_associated_SNPs_27590 1 0 1 4 0 Ribosome 0.438717308963982 0.438761181785405 0 0 hPsi_site_21314 iPseU_CNN:0;iRNA_PseU:0 21315 chr15 22840285 22840285 1 + G A BRCA 22840284 + 22840264 22840304 41 ACTGTCACTTCTTCTGTGTCTGTCAGACTCTCCTTCAAACA ACTGTCACTTCTTCTGTGTCTATCAGACTCTCCTTCAAACA < 41bp 0.420650174513715 0.827905867221363 0.47543618 0.6963906 prediction 0.655811734442727 Functional Gain - TUBGCP5 ENSG00000153575 CDS Human other chr15:22840284 chr15:22840285 synonymous SNV . 0 22 hPsi_associated_SNPs_27591 0 0 0 0 2 chromatin 0.437241692750171 0.436963933925052 0.3927812 0 hPsi_site_21315 iPseU_CNN:0.3927812;iRNA_PseU:0 21316 chr20 34021833 34021833 1 + G A LUSC 34021832 + 34021812 34021852 41 CACACAGCAGGTGGGTGGTGTGGACTCGGGGTCCATGGAGT CACACAGCAGGTGGGTGGTGTAGACTCGGGGTCCATGGAGT < 41bp 0.563022647121117 0.890928202790544 0.3609951 0.6412174 prediction 0.655811111338853 Functional Gain - GDF5;GDF5OS ENSG00000125965 CDS Human protein_coding chr20:34021832 chr20:34021833 synonymous SNV . 0 22 hPsi_associated_SNPs_27592 0 0 0 0 0 unknown 0.438732211974466 0.438867250447515 0.2824348 0 hPsi_site_21316 iPseU_CNN:0.2824348;iRNA_PseU:0 21317 chr17 9546404 9546404 1 + G A CESC 9546403 + 9546383 9546423 41 TGAAGTGACTCACGTTGGGGTGGGACACAGTGGCAACATCA TGAAGTGACTCACGTTGGGGTAGGACACAGTGGCAACATCA < 41bp 0.567893659962758 0.895799136021103 0.27014405 0.69468653 prediction 0.65581095211669 Functional Gain - CFAP52 ENSG00000166596 CDS Human protein_coding chr17:9546403 chr17:9546404 synonymous SNV . 0 22 hPsi_associated_SNPs_27593 0 0 0 0 1 nucleus 0.438817603805048 0.438718596286319 0.38937306 0 hPsi_site_21317 iPseU_CNN:0.38937306;iRNA_PseU:0 21318 chr4 128628059 128628059 1 + G A STAD 128628058 + 128628038 128628078 41 AGCCCCCATACTACACCGGATGCAGTACGGAAGCAAAGAGA AGCCCCCATACTACACCGGATACAGTACGGAAGCAAAGAGA < 41bp 0.425659329621445 0.827898990581313 0.2604043 0.33512074 prediction 0.655797981162626 Functional Gain - INTU ENSG00000164066 CDS Human protein_coding chr4:128628058 chr4:128628059 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27594 0 0 0 0 1 nucleolus 0.43871801199756 0.438718593028514 0 0 hPsi_site_21318 iPseU_CNN:0;iRNA_PseU:0 21319 chr1 158576625 158576625 1 + G A PRAD 158576624 + 158576604 158576644 41 ATCTGTGCTCCACTCCACTATGCCAGCCACATGAATCCTAC ATCTGTGCTCCACTCCACTATACCAGCCACATGAATCCTAC < 41bp 0.562050821226511 0.889947908814567 0.40886042 0.62004584 prediction 0.655794175176113 Functional Gain - OR10Z1 ENSG00000198967 CDS Human protein_coding chr1:158576624 chr1:158576625 nonsynonymous SNV 0.812 0 22 hPsi_associated_SNPs_27595 0 0 0 0 0 unknown 0.450143051935947 0.442575069796016 0.24009168 0 hPsi_site_21319 iPseU_CNN:0.24009168;iRNA_PseU:0 21320 chr16 16225711 16225711 1 + C A TGCT 16225710 + 16225690 16225730 41 CCAGGTGGGCCGAGTGGAATTCCGGAACTACTGCCTGCGCT CCAGGTGGGCCGAGTGGAATTACGGAACTACTGCCTGCGCT < 41bp 0.452412491440103 0.827894911919933 0.512617 0.78425777 prediction 0.655789823839866 Functional Gain - ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16225710 chr16:16225711 nonsynonymous SNV 0.973 5 22 hPsi_associated_SNPs_27596 0 0 1 0 1 Mitochondrion 0.438719163811003 0.43871871103277 0.54328154 0 hPsi_site_21320 iPseU_CNN:0.54328154;iRNA_PseU:0 21321 chr3 33425581 33425581 1 + G A STAD 33425580 + 33425560 33425600 41 GGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTG GGGTACTGGAGTTGGACAACTACCTCCTCATCACTGATGTG < 41bp 0.411289565854774 0.827894382613577 0.20604742 0.5296565 prediction 0.655788765227154 Functional Gain - FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33425580 chr3:33425581 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_27597 0 0 0 1 0 chromatin 0.420216174851582 0.402281289723037 0.0593129999999999 0 hPsi_site_21321 iPseU_CNN:0.0593129999999999;iRNA_PseU:0 21322 chr2 70131584 70131584 1 + G A rs1048130 70131583 + 70131563 70131603 41 AAAATCTTATTTATGATATATGCAGTTAACTTACCTTGCCT AAAATCTTATTTATGATATATACAGTTAACTTACCTTGCCT < 41bp 0.475459743589921 0.82789249398277 0.1796484 0.19301215 prediction 0.655784987965539 Functional Gain - SNRNP27 ENSG00000124380 UTR3 Human protein_coding chr2:70131583 chr2:70131584 . . 0 22 hPsi_associated_SNPs_27598 0 0 1 5 0 Ribosome 0.438704757212343 0.438578337147131 0 0 hPsi_site_21322 iPseU_CNN:0;iRNA_PseU:0 21323 chr8 21960354 21960354 1 + G A COAD 21960353 + 21960333 21960373 41 TGGTGGTGCTGGAGGAGTTCTGCAAGGAGCTGGCTGCCATT TGGTGGTGCTGGAGGAGTTCTACAAGGAGCTGGCTGCCATT < 41bp 0.429562140250196 0.827890125626706 0.27581555 0.7123327 prediction 0.655780251253412 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21960353 chr8:21960354 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27599 0 0 1 0 1 chromatin 0.438718592994741 0.438718592993033 0.4246654 0 hPsi_site_21323 iPseU_CNN:0.4246654;iRNA_PseU:0 21324 chr7 72640015 72640015 1 + C A UCEC 72640014 + 72639994 72640034 41 CATGAGCCTGCCCACCAAGATCTCCCGCTGTCCCCACCTCC CATGAGCCTGCCCACCAAGATATCCCGCTGTCCCCACCTCC < 41bp 0.513538109954156 0.841427199026102 0.20075467 0.21953714 prediction 0.655778178143892 Functional Gain - NCF1B ENSG00000182487 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72640014 chr7:72640015 . . 0 22 hPsi_associated_SNPs_27600 0 0 0 0 2 unknown 0.438718592414945 0.438718592981261 0 0 hPsi_site_21324 iPseU_CNN:0;iRNA_PseU:0 21325 chr14 105167839 105167839 1 + C A UCEC 105167838 + 105167818 105167858 41 TCCGGCTGCTCCAGATGCCCTCTGTGGTCAACTACTCCGGC TCCGGCTGCTCCAGATGCCCTATGTGGTCAACTACTCCGGC < 41bp 0.462581544923671 0.827888024059715 0.36087242 0.46935305 prediction 0.655776048119431 Functional Gain - INF2 ENSG00000203485 CDS Human protein_coding chr14:105167838 chr14:105167839 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_27601 0 0 1 0 0 Cytosol 0.438718588310628 0.438781991262894 0 0 hPsi_site_21325 iPseU_CNN:0;iRNA_PseU:0 21326 chr9 132632799 132632799 1 + G T LUAD 132632798 + 132632778 132632818 41 ACCCTGGAAGACTGCCTTGCTGCCTTCTTTGCCGCTGATGA ACCCTGGAAGACTGCCTTGCTTCCTTCTTTGCCGCTGATGA < 41bp 0.50802876006956 0.835902135004716 0.2629803 0.33434236 prediction 0.655746749870311 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132632798 chr9:132632799 nonsynonymous SNV 0.910 3 22 hPsi_associated_SNPs_27602 0 0 0 0 1 chromatin 0.438695473183929 0.438713922960349 0 0 hPsi_site_21326 iPseU_CNN:0;iRNA_PseU:0 21327 chr3 51978469 51978469 1 + G A LUAD 51978468 + 51978448 51978488 41 GAAGATGCAAAGAAGGACTTTGAGAAGAAATTTCGGGAAAA GAAGATGCAAAGAAGGACTTTAAGAAGAAATTTCGGGAAAA < 41bp 0.418512587506181 0.82786832591952 0.29136267 0.43283463 prediction 0.655736651839041 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978468 chr3:51978469 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_27603 0 0 1 0 1 nucleus 0.438718593235044 0.43871841857598 0 0 hPsi_site_21327 iPseU_CNN:0;iRNA_PseU:0 21328 chr1 120057175 120057175 1 + C A LUSC 120057174 + 120057154 120057194 41 AGATCTGGCGTATAAGCCACTCTACAGCTGGGAGGAAGCCA AGATCTGGCGTATAAGCCACTATACAGCTGGGAGGAAGCCA < 41bp 0.475165325940074 0.827866256697872 0.20795575 0.26244742 prediction 0.655732513395744 Functional Gain - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120057174 chr1:120057175 synonymous SNV . 0 22 hPsi_associated_SNPs_27604 0 0 0 0 0 exosome 0.438718539845272 0.438718592994671 0 0 hPsi_site_21328 iPseU_CNN:0;iRNA_PseU:0 21329 chr2 189873885 189873885 1 + C A UCEC 189873884 + 189873864 189873904 41 GCCTCATTAGTCCTGATGGTTCTCGTAAAAACCCCGCTAGA GCCTCATTAGTCCTGATGGTTATCGTAAAAACCCCGCTAGA < 41bp 0.479045215019738 0.827865165424292 0.43591046 0.68808246 prediction 0.655730330848584 Functional Gain - COL3A1 ENSG00000168542 CDS Human protein_coding chr2:189873884 chr2:189873885 nonsynonymous SNV 0.981 3 22 hPsi_associated_SNPs_27605 0 0 0 0 1 Endoplasmic reticulum 0.438718646855039 0.43871852737508 0.37616492 0 hPsi_site_21329 iPseU_CNN:0.37616492;iRNA_PseU:0 21330 chr1 52705124 52705124 1 + G A COAD 52705123 + 52705103 52705143 41 GATCTCAGAGCTGGTCAGTTTGGAATTTCTGCCAGAAAGCC GATCTCAGAGCTGGTCAGTTTAGAATTTCTGCCAGAAAGCC < 41bp 0.432846283412129 0.827864780421979 0.35148886 0.67638254 prediction 0.655729560843958 Functional Gain - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52705123 chr1:52705124 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27606 0 0 1 0 0 Ribosome 0.438718592995124 0.438718592995098 0.35276508 0 hPsi_site_21330 iPseU_CNN:0.35276508;iRNA_PseU:0 21331 chr19 2213901 2213901 1 + C A UCEC 2213900 + 2213880 2213920 41 GATTCAAGCGCAGAAGGAGATCTCCGCCCATAACCAGCAGC GATTCAAGCGCAGAAGGAGATATCCGCCCATAACCAGCAGC < 41bp 0.534166636986896 0.862031232129049 0.50714254 0.67522895 prediction 0.655729190284306 Functional Gain - DOT1L ENSG00000104885 CDS Human protein_coding chr19:2213900 chr19:2213901 synonymous SNV . 0 22 hPsi_associated_SNPs_27607 0 0 1 0 2 Cytosol 0.438718590837644 0.438875747659524 0.33617282 0 hPsi_site_21331 iPseU_CNN:0.33617282;iRNA_PseU:0 21332 chr13 103510675 103510675 1 + C A LUSC 103510674 + 103510654 103510694 41 AGATATTGAGTCTGAGGACTTCAGCAGCCTGCCCCCTGAAG AGATATTGAGTCTGAGGACTTAAGCAGCCTGCCCCCTGAAG < 41bp 0.540150535555759 0.86800315737073 0.20682588 0.3224278 prediction 0.655705243629943 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103510674 chr13:103510675 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_27608 0 0 1 0 2 unknown 0.438721998830702 0.438721377588834 0 0 hPsi_site_21332 iPseU_CNN:0;iRNA_PseU:0 21333 chr11 88961116 88961116 1 + C A STAD 88961115 + 88961095 88961135 41 GCCAACGATCCTATCTTCCTTCTTCACCATGCATTTGTTGA GCCAACGATCCTATCTTCCTTATTCACCATGCATTTGTTGA < 41bp 0.476210147895978 0.827849544626114 0.2225307 0.32904208 prediction 0.655699089252229 Functional Gain - TYR ENSG00000077498 CDS Human protein_coding chr11:88961115 chr11:88961116 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27609 0 0 0 0 1 unknown 0.436015422543969 0.438508206753446 0 0 hPsi_site_21333 iPseU_CNN:0;iRNA_PseU:0 21334 chr3 45942736 45942736 1 + G A CESC 45942735 + 45942715 45942755 41 CATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGG CATTGCCATTGCCCAGGCCATAAGAGCACATACTTGGAGGG < 41bp 0.417487587150765 0.827846828981011 0.17696607 0.20320496 prediction 0.655693657962022 Functional Gain - CCR9 ENSG00000173585 CDS Human protein_coding chr3:45942735 chr3:45942736 nonsynonymous SNV 0.651 1 22 hPsi_associated_SNPs_27610 0 0 0 0 0 exosome 0.438718484659255 0.43872359178524 0 0 hPsi_site_21334 iPseU_CNN:0;iRNA_PseU:0 21335 chr12 54367370 54367370 1 + G A CESC 54367369 + 54367349 54367389 41 CACCGTCACCGAGATCCTCATGAAAAACGAAGGCTCCTACG CACCGTCACCGAGATCCTCATAAAAAACGAAGGCTCCTACG < 41bp 0.424591606213484 0.827845257781167 0.15617296 0.31813017 prediction 0.655690515562335 Functional Gain - HOXC11 ENSG00000123388 CDS Human protein_coding chr12:54367369 chr12:54367370 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27611 0 0 0 0 0 exosome 0.43871862900216 0.438718592993516 0 0 hPsi_site_21335 iPseU_CNN:0;iRNA_PseU:0 21336 chr1 173839572 173839572 1 + C A UCEC 173839571 + 173839551 173839591 41 TGAATGAGATGAGTACAGTCTCCATTTCAGTCATCAAGAAC TGAATGAGATGAGTACAGTCTACATTTCAGTCATCAAGAAC < 41bp 0.536925475545976 0.864765339616644 0.23160788 0.3063742 prediction 0.655679728141336 Functional Gain - ZBTB37 ENSG00000185278 CDS Human protein_coding chr1:173839571 chr1:173839572 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27612 0 0 1 0 0 chromatin 0.438637061600488 0.43926291049819 0 0 hPsi_site_21336 iPseU_CNN:0;iRNA_PseU:0 21337 chr2 113410324 113410324 1 + G A rs535912709 113410323 + 113410303 113410343 41 CGAGCTTTGCCAGTTTTCTATGCCTGCACAGTTGGAATAAA CGAGCTTTGCCAGTTTTCTATACCTGCACAGTTGGAATAAA < 41bp 0.573424163184009 0.901255903886545 0.35233623 0.5463298 prediction 0.655663481405072 Functional Gain - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113410323 chr2:113410324 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27613 0 0 1 0 2 Ribosome 0.438179000990034 0.438576137982244 0.0926596 0 hPsi_site_21337 iPseU_CNN:0.0926596;iRNA_PseU:0 21338 chr5 68687792 68687792 1 + G A rs73113070 68687791 + 68687771 68687811 41 CAAGCTATTGGTGGCAAAGATGTTTCTCTGTTTCTCTTCAG CAAGCTATTGGTGGCAAAGATATTTCTCTGTTTCTCTTCAG < 41bp 0.558616719405557 0.886447533425583 0.26447892 0.3194771 prediction 0.655661628040052 Functional Gain - RAD17 ENSG00000152942 CDS Human protein_coding chr5:68687791 chr5:68687792 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_27614 0 0 0 0 1 Cytosol 0.438852677233459 0.438829267673089 0 0 hPsi_site_21338 iPseU_CNN:0;iRNA_PseU:0 21339 chr1 35569964 35569964 1 + G A PRAD 35569963 + 35569943 35569983 41 CTACCTCTTGCAAAACTTTTTGCAGCCTATCTTGTCTTTCA CTACCTCTTGCAAAACTTTTTACAGCCTATCTTGTCTTTCA < 41bp 0.493682541156458 0.827828044950327 0.38594216 0.40808424 prediction 0.655656089900655 Functional Gain - ZMYM1 ENSG00000197056 CDS Human protein_coding chr1:35569963 chr1:35569964 nonsynonymous SNV 0.861 4 22 hPsi_associated_SNPs_27615 0 0 1 3 1 Cytosol 0.437060187391652 0.438554561022477 0 0 hPsi_site_21339 iPseU_CNN:0;iRNA_PseU:0 21340 chr1 44878307 44878307 1 + G A OV 44878306 + 44878286 44878326 41 TCCCCCGGTTCACTAAAGGTTGATGACACTGGGAAGAAGAT TCCCCCGGTTCACTAAAGGTTAATGACACTGGGAAGAAGAT < 41bp 0.425301828171357 0.827825561757505 0.3252396 0.48781577 prediction 0.65565112351501 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878306 chr1:44878307 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_27616 0 0 0 0 1 Ribosome 0.438712269118192 0.438691740512194 0 0 hPsi_site_21340 iPseU_CNN:0;iRNA_PseU:0 21341 chr3 111710363 111710363 1 + G A COAD 111710362 + 111710342 111710382 41 ATAGCCCAATTCCTGTGAACTGCCCCATAAGATTGCTCCAT ATAGCCCAATTCCTGTGAACTACCCCATAAGATTGCTCCAT < 41bp 0.432576803664045 0.827808028733847 0.20327222 0.48954952 prediction 0.655616057467693 Functional Gain - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111710362 chr3:111710363 nonsynonymous SNV 0.832 4 22 hPsi_associated_SNPs_27617 0 0 1 0 0 Ribosome 0.438718578049122 0.438689706606628 0 0 hPsi_site_21341 iPseU_CNN:0;iRNA_PseU:0 21342 chr2 172309675 172309675 1 + C A rs150095386 172309674 + 172309654 172309694 41 TTTGCTGTACCTTGCAGTGTTCCGAGTTCTACCTTTTTCAC TTTGCTGTACCTTGCAGTGTTACGAGTTCTACCTTTTTCAC < 41bp 0.535844549639966 0.863649047448041 0.48269364 0.8022108 prediction 0.655608995616151 Functional Gain - DCAF17 ENSG00000115827 CDS Human protein_coding chr2:172309674 chr2:172309675 nonsynonymous SNV 0.964 2 22 hPsi_associated_SNPs_27618 1 0 1 0 1 chromatin 0.438610581173797 0.434711520277421 0.6044216 0 hPsi_site_21342 iPseU_CNN:0.6044216;iRNA_PseU:0 21343 chr12 132425907 132425907 1 + G A UCEC 132425906 + 132425886 132425926 41 CAGGACCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGC CAGGACCTATTGCTACCTGCTACCCACGTTTGCCTTTGCGC < 41bp 0.568655863643523 0.896460244062794 0.23679745 0.3930633 prediction 0.655608760838542 Functional Gain - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132425906 chr12:132425907 synonymous SNV . 0 22 hPsi_associated_SNPs_27619 0 0 1 0 1 Cytosol 0.438853087731657 0.439217402372249 0 0 hPsi_site_21343 iPseU_CNN:0;iRNA_PseU:0 21344 chr5 131977956 131977956 1 + C A UCEC 131977955 + 131977935 131977975 41 TTGTGGAGCTTTTAGGACGTTCTGAATATGTGGAGAAATTC TTGTGGAGCTTTTAGGACGTTATGAATATGTGGAGAAATTC < 41bp 0.505040025821293 0.832841895741281 0.3761571 0.56795037 prediction 0.655603739839976 Functional Gain - RAD50 ENSG00000113522 CDS Human protein_coding chr5:131977955 chr5:131977956 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27620 0 0 1 0 1 Cytosol 0.438718587184157 0.43871859595914 0.13590074 0 hPsi_site_21344 iPseU_CNN:0.13590074;iRNA_PseU:0 21345 chr15 91423985 91423985 1 + G A BLCA 91423984 + 91423964 91424004 41 ATGACAACTCATTCCTGGGATGAGGATCCCTCTGGCGAGTG ATGACAACTCATTCCTGGGATAAGGATCCCTCTGGCGAGTG < 41bp 0.572996754537107 0.900798567539953 0.24716288 0.50769186 prediction 0.655603626005693 Functional Gain - FURIN ENSG00000140564 CDS Human protein_coding chr15:91423984 chr15:91423985 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27621 0 0 1 0 2 Ribosome 0.43784676977829 0.438718592995145 0.01538372 0 hPsi_site_21345 iPseU_CNN:0.01538372;iRNA_PseU:0 Non-glioblastoma glioma 21346 chr8 110100375 110100375 1 + G A SKCM 110100374 + 110100354 110100394 41 ATCCTGGCTACCGTCCTCTATGGATTCATAGCTAGAATCCT ATCCTGGCTACCGTCCTCTATAGATTCATAGCTAGAATCCT < 41bp 0.429896462820211 0.827798493161485 0.2503446 0.54135245 prediction 0.65559698632297 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110100374 chr8:110100375 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27622 0 0 0 0 0 exosome 0.438718593491143 0.438718592995111 0.0827049 0 hPsi_site_21346 iPseU_CNN:0.0827049;iRNA_PseU:0 Protein quantitative trait loci 21347 chrX 48557408 48557408 1 + C A KIRC 48557407 + 48557387 48557427 41 GAACCTCTATGACTTTGAAGTCGAGTACCTGTGCGATTACA GAACCTCTATGACTTTGAAGTAGAGTACCTGTGCGATTACA < 41bp 0.464041593449564 0.827797988831579 0.34875464 0.5794011 prediction 0.655595977663158 Functional Gain - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48557407 chrX:48557408 synonymous SNV . 0 22 hPsi_associated_SNPs_27623 0 0 1 0 1 Ribosome 0.438706579572305 0.438688944817741 0.1588022 0 hPsi_site_21347 iPseU_CNN:0.1588022;iRNA_PseU:0 21348 chr17 39261759 39261759 1 + G A rs200073845 39261758 + 39261738 39261778 41 CCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGTTGTGTA CCTGCTGCAGGACCACCTGCTACCGCCCCAGCTGTTGTGTA < 41bp 0.562736882234231 0.89053452306126 0.27172047 0.5645755 prediction 0.655595281654058 Functional Gain - KRTAP4-9 ENSG00000212722 CDS Human protein_coding chr17:39261758 chr17:39261759 nonsynonymous SNV 0.772 1 22 hPsi_associated_SNPs_27624 0 0 0 0 0 unknown 0.438718167555401 0.438718978994003 0.129151 0 hPsi_site_21348 iPseU_CNN:0.129151;iRNA_PseU:0 21349 chr15 41862851 41862851 1 + G A UCEC 41862850 + 41862830 41862870 41 AAAGGAAAAACTGGAGGATGTGCTCATCCCAGAGCAGCAGT AAAGGAAAAACTGGAGGATGTACTCATCCCAGAGCAGCAGT < 41bp 0.410064840406865 0.827797320534767 0.32288468 0.8419383 prediction 0.655594641069533 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41862850 chr15:41862851 synonymous SNV . 0 22 hPsi_associated_SNPs_27625 0 0 0 0 2 Ribosome 0.438717934532359 0.438280549036561 0.6838766 0 hPsi_site_21349 iPseU_CNN:0.6838766;iRNA_PseU:0 21350 chr15 72104690 72104690 1 + G A SKCM 72104689 + 72104669 72104709 41 CCAACAGCTGATGAGAATATTGATGTCACCAGCAATGACCC CCAACAGCTGATGAGAATATTAATGTCACCAGCAATGACCC < 41bp 0.412968252374353 0.827797305964513 0.24695784 0.28821477 prediction 0.655594611929025 Functional Gain - NR2E3 ENSG00000031544 ncRNA_exonic Human other chr15:72104689 chr15:72104690 . 0.962 0 22 hPsi_associated_SNPs_27626 0 0 0 0 1 nucleus 0.440557667074312 0.438829065706595 0 0 hPsi_site_21350 iPseU_CNN:0;iRNA_PseU:0 21351 chr1 231402089 231402089 1 + C A UCEC 231402088 + 231402068 231402108 41 ATCCATGTGTACTTTGGAGATCCTGTGTCACTTCGATCTTT ATCCATGTGTACTTTGGAGATACTGTGTCACTTCGATCTTT < 41bp 0.467744981596005 0.8277955400275 0.2328557 0.55759895 prediction 0.655591080055 Functional Gain - GNPAT ENSG00000116906 CDS Human protein_coding chr1:231402088 chr1:231402089 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_27627 0 0 1 0 2 Cytosol 0.438719036738871 0.438718262546043 0.1151979 0 hPsi_site_21351 iPseU_CNN:0.1151979;iRNA_PseU:0 21352 chr22 25907435 25907435 1 + G A rs9680640 25907434 + 25907414 25907454 41 CGGGCATGGTGATGCATGCCTGTAGTCCCAGCTACTAGGGA CGGGCATGGTGATGCATGCCTATAGTCCCAGCTACTAGGGA < 41bp 0.465874781375728 0.827795120564739 0.31559235 0.5223054 prediction 0.655590241129479 Functional Gain - CRYBB2P1;GRK3 ENSG00000100058 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:25907434 chr22:25907435 . . 0 22 hPsi_associated_SNPs_27628 0 0 0 0 0 unknown 0.438705111834704 0.438719290938858 0.0446108000000001 0 hPsi_site_21352 iPseU_CNN:0.0446108000000001;iRNA_PseU:0 21353 chr7 23349102 23349102 1 + C A HNSC 23349101 + 23349081 23349121 41 TGAGACAGTACCTGAAGACTTCATTCTTGGAATAGAAGATG TGAGACAGTACCTGAAGACTTAATTCTTGGAATAGAAGATG < 41bp 0.478889638456233 0.82779132350173 0.19290558 0.27044302 prediction 0.655582647003459 Functional Gain - MALSU1 ENSG00000156928 CDS Human protein_coding chr7:23349101 chr7:23349102 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27629 0 0 1 0 0 Ribosome 0.438727061496837 0.438719129210683 0 0 hPsi_site_21353 iPseU_CNN:0;iRNA_PseU:0 21354 chr4 90833157 90833157 1 + G A LUSC 90833156 + 90833136 90833176 41 AAATTGTCACCTCATTGGATTGGAGGTGCTGTCCTGGATAC AAATTGTCACCTCATTGGATTAGAGGTGCTGTCCTGGATAC < 41bp 0.41903049519763 0.82778969009732 0.36197713 0.6511844 prediction 0.655579380194641 Functional Gain - MMRN1 ENSG00000138722 CDS Human protein_coding chr4:90833156 chr4:90833157 stopgain 0.996 1 22 hPsi_associated_SNPs_27630 0 0 0 0 2 cytosol 0.438719382378128 0.439542748032217 0.3023688 0 hPsi_site_21354 iPseU_CNN:0.3023688;iRNA_PseU:0 21355 chr19 49606449 49606449 1 + C A rs734570 49606448 + 49606428 49606468 41 TTGGTGAGGGCGGACAGGTTTCTGAGGCCTCCCTAGCCTTC TTGGTGAGGGCGGACAGGTTTATGAGGCCTCCCTAGCCTTC < 41bp 0.516015986445245 0.843805032173944 0.4314673 0.7126046 prediction 0.655578091457398 Functional Gain - SNRNP70 ENSG00000104852 UTR3 Human protein_coding chr19:49606448 chr19:49606449 . . 0 22 hPsi_associated_SNPs_27631 0 0 1 0 0 Nucleus 0.438718592995102 0.438718592995102 0.4252092 0 hPsi_site_21355 iPseU_CNN:0.4252092;iRNA_PseU:0 21356 chr13 32376335 32376335 1 + G A LUAD 32376334 + 32376314 32376354 41 CCTTCCAGTTAACAGTGCTTTGAATCCAATCCTCTATACTC CCTTCCAGTTAACAGTGCTTTAAATCCAATCCTCTATACTC < 41bp 0.445339966059587 0.827787623392012 0.3361537 0.7117382 prediction 0.655575246784024 Functional Gain - RXFP2 ENSG00000133105 CDS Human protein_coding chr13:32376334 chr13:32376335 synonymous SNV . 0 22 hPsi_associated_SNPs_27632 0 0 0 0 1 exosome 0.438719129454364 0.438718525255506 0.4234764 0 hPsi_site_21356 iPseU_CNN:0.4234764;iRNA_PseU:0 21357 chr14 105930777 105930777 1 + C A UCEC 105930776 + 105930756 105930796 41 CACAGTCTTACCAGTGGTATTCTTGGGGTCCCCCTAACATG CACAGTCTTACCAGTGGTATTATTGGGGTCCCCCTAACATG < 41bp 0.461362523829354 0.827787580656413 0.5260562 0.6699744 prediction 0.655575161312826 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105930776 chr14:105930777 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27633 0 0 1 0 1 Cytosol 0.438657645879979 0.438880862557634 0.2878364 0 hPsi_site_21357 iPseU_CNN:0.2878364;iRNA_PseU:0 21358 chr3 9868779 9868779 1 + G A CESC 9868778 + 9868758 9868798 41 TGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCTT TGGGTGGTGCAGAAGTATATTAAGCGGCCCCTCCTCATCTT < 41bp 0.575999155377037 0.903785663727165 0.3484288 0.49062616 prediction 0.655573016700256 Functional Gain - ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9868778 chr3:9868779 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27634 0 0 1 0 1 unknown 0.438717981173441 0.438718608965482 0 0 hPsi_site_21358 iPseU_CNN:0;iRNA_PseU:0 21359 chr9 123912687 123912687 1 + C A SKCM 123912686 + 123912666 123912706 41 GCCCCCATGGTGTATGGGCCTCCACCCCCCAACTTCTCCAT GCCCCCATGGTGTATGGGCCTACACCCCCCAACTTCTCCAT < 41bp 0.46351983189339 0.827773772543332 0.26100987 0.37311494 prediction 0.655547545086665 Functional Gain - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123912686 chr9:123912687 nonsynonymous SNV 0.779 3 22 hPsi_associated_SNPs_27635 0 0 1 0 1 chromatin 0.43871859282308 0.438718592946152 0 0 hPsi_site_21359 iPseU_CNN:0;iRNA_PseU:0 21360 chr7 106545797 106545797 1 + C A READ 106545796 + 106545776 106545816 41 AATTGGTTTCTACATCTTGTTCTTGGCATCAAACAAGGAGA AATTGGTTTCTACATCTTGTTATTGGCATCAAACAAGGAGA < 41bp 0.513098091984817 0.840869092277444 0.3224058 0.3604467 prediction 0.655542000585253 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106545796 chr7:106545797 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_27636 0 0 0 0 0 Cytosol 0.438715168429995 0.438575798073208 0 0 hPsi_site_21360 iPseU_CNN:0;iRNA_PseU:0 21361 chr6 44221015 44221015 1 + G A GBM 44221014 + 44220994 44221034 41 TAAGGCAGTTAAGGACCTGGTGGTGCTGCTGTTTGAAACCG TAAGGCAGTTAAGGACCTGGTAGTGCTGCTGTTTGAAACCG < 41bp 0.40845394620542 0.827769440465874 0.3101789 0.76212823 prediction 0.655538880931748 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221014 chr6:44221015 synonymous SNV . 0 22 hPsi_associated_SNPs_27637 0 0 1 0 0 Nucleus 0.438718593006676 0.438715300451078 0.52425646 0 hPsi_site_21361 iPseU_CNN:0.52425646;iRNA_PseU:0 21362 chr2 170557693 170557693 1 + C A UCEC 170557692 + 170557672 170557712 41 AAATGAAAAGAGCAGTGACATCATTGCCTTTCACTCCAGGG AAATGAAAAGAGCAGTGACATAATTGCCTTTCACTCCAGGG < 41bp 0.51914164701305 0.846905921408007 0.15283355 0.20529678 prediction 0.655528548789914 Functional Gain - PHOSPHO2 ENSG00000144362 CDS Human protein_coding chr2:170557692 chr2:170557693 stopgain 0.987 0 22 hPsi_associated_SNPs_27638 0 0 0 0 0 nucleolus 0.438887475921648 0.438687355896686 0 0 hPsi_site_21362 iPseU_CNN:0;iRNA_PseU:0 21363 chrX 140993495 140993495 1 + C A CESC 140993494 + 140993474 140993514 41 CTCTCCAGAATTCTCAGAGTTCTCCTGAGGGGAAGGACTCC CTCTCCAGAATTCTCAGAGTTATCCTGAGGGGAAGGACTCC < 41bp 0.477496465801359 0.827764005875747 0.32065716 0.57044065 prediction 0.655528011751493 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140993494 chrX:140993495 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_27639 0 0 0 0 0 exosome 0.439367790030137 0.438710773538816 0.1408813 0 hPsi_site_21363 iPseU_CNN:0.1408813;iRNA_PseU:0 21364 chr17 65688835 65688835 1 + C A OV 65688834 + 65688814 65688854 41 GTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGAC GTGCGCCTTCTAGTGCTCCATACACCCCTCTCTCCACAGAC < 41bp 0.510620787126163 0.838379370399856 0.30913016 0.649443 prediction 0.655517166547387 Functional Gain - PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65688834 chr17:65688835 nonsynonymous SNV 0.731 2 22 hPsi_associated_SNPs_27640 0 0 0 1 0 Cytosol 0.438717247593266 0.438697342281037 0.298886 0 hPsi_site_21364 iPseU_CNN:0.298886;iRNA_PseU:0 21365 chr13 45953359 45953359 1 + C A UCEC 45953358 + 45953338 45953378 41 AGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGGCA AGATTGCAAATGACCTGCTTTATTTCTGTTCCCGGGTGGCA < 41bp 0.50086046829783 0.828617265678644 0.48357463 0.57924074 prediction 0.655513594761628 Functional Gain - TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45953358 chr13:45953359 . . 0 22 hPsi_associated_SNPs_27641 0 0 1 0 1 unknown 0.920503510812579 0.438757889588789 0.15848148 0 hPsi_site_21365 iPseU_CNN:0.15848148;iRNA_PseU:0 21366 chr1 209905850 209905850 1 + C A UCEC 209905849 + 209905829 209905869 41 CTTTGGATGGGTTCTTCTCCTCCATCAGAAAGGAATATTCA CTTTGGATGGGTTCTTCTCCTACATCAGAAAGGAATATTCA < 41bp 0.466116522459902 0.827747384427697 0.22005397 0.27707714 prediction 0.655494768855394 Functional Gain - HSD11B1 ENSG00000117594 CDS Human protein_coding chr1:209905849 chr1:209905850 nonsynonymous SNV 0.284 4 22 hPsi_associated_SNPs_27642 0 0 0 0 2 Endoplasmic reticulum 0.438755293165927 0.438718600081705 0 0 hPsi_site_21366 iPseU_CNN:0;iRNA_PseU:0 Blood protein levels 21367 chr19 47109111 47109111 1 + G A UCEC 47109110 + 47109090 47109130 41 CAGCTGACTGAGGAGCAGATTGCAGGTGAGTCTGCTATCCC CAGCTGACTGAGGAGCAGATTACAGGTGAGTCTGCTATCCC < 41bp 0.416780062106678 0.827736662028789 0.2755865 0.41390675 prediction 0.655473324057579 Functional Gain - CALM3 ENSG00000160014 CDS Human protein_coding chr19:47109110 chr19:47109111 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_27643 0 0 1 0 2 Ribosome 0.43854151794158 0.436576364297435 0 0 hPsi_site_21367 iPseU_CNN:0;iRNA_PseU:0 21368 chr8 145584019 145584019 1 + G A COAD 145584018 + 145583998 145584038 41 GTTGGCCGCCACCAACGCGCTGACCAATGGCGTGCTGCCTG GTTGGCCGCCACCAACGCGCTAACCAATGGCGTGCTGCCTG < 41bp 0.416311293759422 0.82773635385576 0.22693262 0.34623086 prediction 0.655472707711521 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145584018 chr8:145584019 synonymous SNV . 0 22 hPsi_associated_SNPs_27644 0 0 1 0 0 Ribosome 0.439146063716232 0.438637830819232 0 0 hPsi_site_21368 iPseU_CNN:0;iRNA_PseU:0 21369 chr10 21805188 21805188 1 + G T UCEC 21805189 - 21805169 21805209 41 GAGTCGCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAA GAGTCGCCGGCGGAGTGGAATATGCAGAGCTGGGCCCCCAA < 41bp 0.52973232939714 0.857468507976069 0.7050788 0.6776783 prediction 0.655472357157857 Functional Gain - SKIDA1 ENSG00000180592 CDS Human protein_coding chr10:21805189 chr10:21805188 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_27645 0 0 0 0 0 Nucleus 0.438718592357259 0.438718592948814 0 0 hPsi_site_21369 iPseU_CNN:0;iRNA_PseU:0 21370 chr12 55714979 55714979 1 + C A UCEC 55714978 + 55714958 55714998 41 TCTTAGAGGTGATGGGATTTTCTTGTGCTGCGTTTACTCTA TCTTAGAGGTGATGGGATTTTATTGTGCTGCGTTTACTCTA < 41bp 0.492787488188186 0.827736057655437 0.3113199 0.5359072 prediction 0.655472115310874 Functional Gain - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55714978 chr12:55714979 nonsynonymous SNV 0.929 0 22 hPsi_associated_SNPs_27646 0 0 0 0 0 unknown 0.438721330424233 0.438721828968766 0.0718144000000001 0 hPsi_site_21370 iPseU_CNN:0.0718144000000001;iRNA_PseU:0 21371 chr1 152732369 152732369 1 + C A BLCA 152732368 + 152732348 152732388 41 AGGGCCAGGCTGCATCCCAATCTCAAACTTCCTCTGTTCAA AGGGCCAGGCTGCATCCCAATATCAAACTTCCTCTGTTCAA < 41bp 0.466998648229817 0.827731746141963 0.6285202 0.8094377 prediction 0.655463492283926 Functional Gain - KPRP ENSG00000203786 CDS Human protein_coding chr1:152732368 chr1:152732369 nonsynonymous SNV 0.128 0 22 hPsi_associated_SNPs_27647 0 0 0 0 0 exosome 0.438718592994693 0.438712489233156 0.361835 0 hPsi_site_21371 iPseU_CNN:0.361835;iRNA_PseU:0 21372 chr15 42681211 42681211 1 + G A LUSC 42681210 + 42681190 42681230 41 GGAGGGGTGGCAGAGTTTTTTGAGATCAGGGATGCTCCTAG GGAGGGGTGGCAGAGTTTTTTAAGATCAGGGATGCTCCTAG < 41bp 0.567165209831314 0.894895393618771 0.20225859 0.29191878 prediction 0.655460367574914 Functional Gain - CAPN3 ENSG00000092529 CDS Human protein_coding chr15:42681210 chr15:42681211 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27648 0 0 0 0 2 Cytosol 0.438718595236121 0.438718593476357 0 0 hPsi_site_21372 iPseU_CNN:0;iRNA_PseU:0 21373 chr6 127901424 127901424 1 + C A BLCA 127901423 + 127901403 127901443 41 CTTACAGATTTGAATTATTTTCTGTCTTCATTACCCTTTCT CTTACAGATTTGAATTATTTTATGTCTTCATTACCCTTTCT < 41bp 0.516551274367557 0.844273172055053 0.32379827 0.40471166 prediction 0.655443795374992 Functional Gain - C6orf58 ENSG00000184530 CDS Human protein_coding chr6:127901423 chr6:127901424 nonsynonymous SNV 0.917 3 22 hPsi_associated_SNPs_27649 0 0 0 0 1 exosome 0.438719682209962 0.438693713469502 0 0 hPsi_site_21373 iPseU_CNN:0;iRNA_PseU:0 21374 chr11 5410716 5410716 1 + C A UCEC 5410715 + 5410695 5410735 41 ATATTCTATCTCACCAGCTTTCCTGGATTGGAAGGCATCAA ATATTCTATCTCACCAGCTTTACTGGATTGGAAGGCATCAA < 41bp 0.507435736880949 0.835150289172826 0.21484217 0.27395594 prediction 0.655429104583754 Functional Gain - OR51M1 ENSG00000184698 CDS Human protein_coding chr11:5410715 chr11:5410716 nonsynonymous SNV 0.069 3 22 hPsi_associated_SNPs_27650 0 0 0 0 0 nucleoplasm 0.438718592998533 0.438718592638391 0 0 hPsi_site_21374 iPseU_CNN:0;iRNA_PseU:0 21375 chr1 220280442 220280442 1 + G A UCEC 220280441 + 220280421 220280461 41 GATGGAGTTTTCACAGATGTTGCAGGTCCTGAACTTCAAAA GATGGAGTTTTCACAGATGTTACAGGTCCTGAACTTCAAAA < 41bp 0.429776490380733 0.827713227245291 0.26763996 0.3976814 prediction 0.655426454490581 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220280441 chr1:220280442 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_27651 0 0 1 0 2 Ribosome 0.438480545785771 0.438745878628168 0 0 hPsi_site_21375 iPseU_CNN:0;iRNA_PseU:0 21376 chr17 80320435 80320435 1 + G A SKCM 80320434 + 80320414 80320454 41 GTGCCCCTGGGCCTGGGCCTTGAGGATGCTGACTGGACCCA GTGCCCCTGGGCCTGGGCCTTAAGGATGCTGACTGGACCCA < 41bp 0.570568273876454 0.898278878206224 0.22985172 0.31045514 prediction 0.655421208659539 Functional Gain - TEX19 ENSG00000182459 CDS Human protein_coding chr17:80320434 chr17:80320435 nonsynonymous SNV 0.764 1 22 hPsi_associated_SNPs_27652 0 0 0 0 0 exosome 0.438691843822887 0.438683567756312 0 0 hPsi_site_21376 iPseU_CNN:0;iRNA_PseU:0 21377 chr14 42356677 42356677 1 + G A UCEC 42356676 + 42356656 42356696 41 AATTCCTGAAGAAGAGTTTTTGTGTGAGCCTCCTCTCATTA AATTCCTGAAGAAGAGTTTTTATGTGAGCCTCCTCTCATTA < 41bp 0.421569073201337 0.827705438020881 0.4442421 0.7019315 prediction 0.655410876041763 Functional Gain - LRFN5 ENSG00000165379 CDS Human protein_coding chr14:42356676 chr14:42356677 synonymous SNV . 0 22 hPsi_associated_SNPs_27653 0 0 0 0 0 Nucleus 0.43871859300322 0.43871859253207 0.403863 0 hPsi_site_21377 iPseU_CNN:0.403863;iRNA_PseU:0 21378 chr10 81444783 81444783 1 + G A rs148705296 81444782 + 81444762 81444802 41 GAGAGGTTCAGAGAGGAGTCTGAGGGTCCCCCGCTGCCCCC GAGAGGTTCAGAGAGGAGTCTAAGGGTCCCCCGCTGCCCCC < 41bp 0.541395531397951 0.869088645302564 0.33286062 0.528656 prediction 0.655386227809225 Functional Gain - BEND3P3 ENSG00000226381 ncRNA_intronic Human other chr10:81444782 chr10:81444783 . . 0 22 hPsi_associated_SNPs_27654 0 0 0 0 0 unknown 0.438724484021769 0.438718592988493 0.057312 0 hPsi_site_21378 iPseU_CNN:0.057312;iRNA_PseU:0 21379 chr19 1073200 1073200 1 + G T SARC 1073199 + 1073179 1073219 41 CGAGTGCCTGGGTGAGGCTCTGCGTGTCATGCATCAGATCA CGAGTGCCTGGGTGAGGCTCTTCGTGTCATGCATCAGATCA < 41bp 0.500545986312328 0.828236894779157 0.3678894 0.75204533 prediction 0.655381816933658 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1073199 chr19:1073200 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_27655 0 0 0 0 2 chromatin 0.438607075651663 0.438598308581749 0.50409066 0 hPsi_site_21379 iPseU_CNN:0.50409066;iRNA_PseU:0 21380 chr8 104340567 104340567 1 + C A UCEC 104340566 + 104340546 104340586 41 GATGACATTAATTGTTGGCATCTCTGCTGTCTTCTGGGTTG GATGACATTAATTGTTGGCATATCTGCTGTCTTCTGGGTTG < 41bp 0.529352938456153 0.857042565326275 0.36350232 0.335619 prediction 0.655379253740244 Functional Gain - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104340566 chr8:104340567 synonymous SNV . 0 22 hPsi_associated_SNPs_27656 0 0 1 0 1 Ribosome 0.438726108111928 0.438394741044348 0 0 hPsi_site_21380 iPseU_CNN:0;iRNA_PseU:0 21381 chr5 36677035 36677035 1 + C A LUAD 36677034 + 36677014 36677054 41 GAGAAGCTTTAAAGTGCCCATCCAGGCCAACGAAACGCTTG GAGAAGCTTTAAAGTGCCCATACAGGCCAACGAAACGCTTG < 41bp 0.532698720397252 0.860387893973751 0.28407022 0.5783778 prediction 0.655378347152998 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36677034 chr5:36677035 synonymous SNV . 0 22 hPsi_associated_SNPs_27657 0 0 1 0 1 Endoplasmic reticulum 0.438718796579097 0.438734422949713 0.1567556 0 hPsi_site_21381 iPseU_CNN:0.1567556;iRNA_PseU:0 21382 chr22 18561178 18561178 1 + C T CESC 18561179 - 18561159 18561199 41 CAGGGGTCCCCCGAGCCCCCTGAGGGGGGCTGCAGAGGTCG CAGGGGTCCCCCGAGCCCCCTAAGGGGGGCTGCAGAGGTCG < 41bp 0.453935687652153 0.827688770310521 0.21241534 0.2854542 prediction 0.655377540621043 Functional Gain - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18561179 chr22:18561178 synonymous SNV . 0 22 hPsi_associated_SNPs_27658 0 0 0 0 0 Ribosome 0.438718592934011 0.438718592870644 0 0 hPsi_site_21382 iPseU_CNN:0;iRNA_PseU:0 21383 chr1 249211569 249211569 1 + G A SKCM 249211568 + 249211548 249211588 41 TTTCCAGAAGCATGCACCCTTGGAAGAGTTCTACAGCTTTG TTTCCAGAAGCATGCACCCTTAGAAGAGTTCTACAGCTTTG < 41bp 0.416032832080661 0.827683484558481 0.35386205 0.3574912 prediction 0.655366969116963 Functional Gain - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211568 chr1:249211569 synonymous SNV . 0 22 hPsi_associated_SNPs_27659 0 0 1 0 1 Cytosol 0.438718124742855 0.438713215786691 0 0 hPsi_site_21383 iPseU_CNN:0;iRNA_PseU:0 21384 chr6 29141949 29141949 1 + C A LUAD 29141948 + 29141928 29141968 41 TCGCCTAGTGGATCACTTCTTCTGTGAAGTTCCAGCACTTC TCGCCTAGTGGATCACTTCTTATGTGAAGTTCCAGCACTTC < 41bp 0.477090501141669 0.827678616672169 0.28964707 0.30298582 prediction 0.655357233344339 Functional Gain - OR2J2 ENSG00000204700 CDS Human protein_coding chr6:29141948 chr6:29141949 nonsynonymous SNV 0.752 0 22 hPsi_associated_SNPs_27660 0 0 0 0 0 unknown 0.43875925931874 0.438682648970913 0 0 hPsi_site_21384 iPseU_CNN:0;iRNA_PseU:0 21385 chr2 74687791 74687791 1 + G A HNSC 74687790 + 74687770 74687810 41 CCCATGGGGCTGTCTTCCAGTGAAGGGGACATCCCATAAGT CCCATGGGGCTGTCTTCCAGTAAAGGGGACATCCCATAAGT < 41bp 0.56528153870581 0.892958854209605 0.2659558 0.57053596 prediction 0.655354631007591 Functional Gain - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687790 chr2:74687791 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_27661 0 0 1 0 0 cytosol 0.438720073033822 0.43871773718454 0.14107192 0 hPsi_site_21385 iPseU_CNN:0.14107192;iRNA_PseU:0 21386 chr19 17379718 17379718 1 + G A BLCA 17379717 + 17379697 17379737 41 CGCTCCAATCCTGAAGGGGCTGAGGACCGGGCAGTAGGGGC CGCTCCAATCCTGAAGGGGCTAAGGACCGGGCAGTAGGGGC < 41bp 0.562761837809365 0.890438620540236 0.27090937 0.63733685 prediction 0.655353565461743 Functional Gain - BABAM1 ENSG00000105393 CDS Human protein_coding chr19:17379717 chr19:17379718 nonsynonymous SNV 0.805 4 22 hPsi_associated_SNPs_27662 0 0 1 0 0 Ribosome 0.438718829912406 0.438718592995864 0.2746737 0 hPsi_site_21386 iPseU_CNN:0.2746737;iRNA_PseU:0 21387 chr11 17757753 17757753 1 + G A BLCA 17757752 + 17757732 17757772 41 CGGCGTCTTCGCGCACATCCTGAACTACTACCGCACGGGCA CGGCGTCTTCGCGCACATCCTAAACTACTACCGCACGGGCA < 41bp 0.419866578491011 0.827672759075096 0.18474054 0.6008704 prediction 0.655345518150193 Functional Gain - KCNC1 ENSG00000129159 CDS Human protein_coding chr11:17757752 chr11:17757753 synonymous SNV . 0 22 hPsi_associated_SNPs_27663 0 0 0 0 0 exosome 0.437567646622808 0.438799451196913 0.2017408 0 hPsi_site_21387 iPseU_CNN:0.2017408;iRNA_PseU:0 21388 chr1 1225720 1225720 1 + C A STAD 1225719 + 1225699 1225739 41 TGTGGCTACTACCTCCACCCTCTGCCGGCGGGGGCTGAGTA TGTGGCTACTACCTCCACCCTATGCCGGCGGGGGCTGAGTA < 41bp 0.473379910838698 0.827666204284957 0.24289873 0.24499243 prediction 0.655332408569915 Functional Gain - SCNN1D ENSG00000162572 CDS Human protein_coding chr1:1225719 chr1:1225720 nonsynonymous SNV 0.010 2 22 hPsi_associated_SNPs_27664 0 0 0 0 2 exosome 0.438718586663534 0.43871859318883 0 0 hPsi_site_21388 iPseU_CNN:0;iRNA_PseU:0 21389 chr15 40866003 40866003 1 + G A STAD 40866002 + 40865982 40866022 41 CCATCTACAACTCAGTTGCCTGGGGTCCTTCTCGAGGCCGG CCATCTACAACTCAGTTGCCTAGGGTCCTTCTCGAGGCCGG < 41bp 0.571584427068006 0.899239970072024 0.2718572 0.28461576 prediction 0.655311086008037 Functional Gain - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40866002 chr15:40866003 stopgain 0.996 1 22 hPsi_associated_SNPs_27665 0 0 0 0 0 Cytosol 0.438718602562595 0.438719259434658 0 0 hPsi_site_21389 iPseU_CNN:0;iRNA_PseU:0 21390 chrX 152225956 152225956 1 + G A LAML 152225955 + 152225935 152225975 41 CCAGGTGCACTGGCCTTTGATGCCTGGCTTGAGCACACCAC CCAGGTGCACTGGCCTTTGATACCTGGCTTGAGCACACCAC < 41bp 0.415563211409988 0.827655099857227 0.21773338 0.34814653 prediction 0.655310199714454 Functional Gain - PNMA3 ENSG00000183837 CDS Human protein_coding chrX:152225955 chrX:152225956 nonsynonymous SNV 0.590 0 22 hPsi_associated_SNPs_27666 0 0 0 0 0 exosome 0.500170014856014 0.438742780582233 0 0 hPsi_site_21390 iPseU_CNN:0;iRNA_PseU:0 21391 chr11 44639760 44639760 1 + G A BLCA 44639759 + 44639739 44639779 41 TACAACTGGACAGACAACGCTGAGCTCATGAATCGCCCTGA TACAACTGGACAGACAACGCTAAGCTCATGAATCGCCCTGA < 41bp 0.404737021081432 0.827652798187772 0.28149676 0.5458193 prediction 0.655305596375544 Functional Gain - CD82 ENSG00000085117 CDS Human protein_coding chr11:44639759 chr11:44639760 nonsynonymous SNV 0.539 0 22 hPsi_associated_SNPs_27667 0 0 1 0 1 Nucleus 0.438255803247932 0.438440671181625 0.0916386 0 hPsi_site_21391 iPseU_CNN:0.0916386;iRNA_PseU:0 21392 chr1 246754949 246754949 1 + G A STAD 246754948 + 246754928 246754968 41 GGTGACAGCGTGGAAAGGAGTGTGACCTGTCTGCCTTCTGC GGTGACAGCGTGGAAAGGAGTATGACCTGTCTGCCTTCTGC < 41bp 0.421539411080026 0.827651392654789 0.6190891 0.60209006 prediction 0.655302785309578 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246754948 chr1:246754949 nonsynonymous SNV 0.749 1 22 hPsi_associated_SNPs_27668 0 0 1 0 0 Ribosome 0.438718592999132 0.438718592995107 0 0 hPsi_site_21392 iPseU_CNN:0;iRNA_PseU:0 21393 chr19 54515511 54515511 1 + C A rs186979452 54515510 + 54515490 54515530 41 TCTCCATTGTACCCCCAAGATCTTTTTGCCCCATCTCCTAG TCTCCATTGTACCCCCAAGATATTTTTGCCCCATCTCCTAG < 41bp 0.521968192151205 0.849618665604492 0.65249956 0.7174115 prediction 0.655300946906573 Functional Gain - CACNG6 ENSG00000130433 UTR3 Human protein_coding chr19:54515510 chr19:54515511 . . 0 22 hPsi_associated_SNPs_27669 0 0 0 0 0 exosome 0.43871859099655 0.438718593065906 0.12982388 0 hPsi_site_21393 iPseU_CNN:0.12982388;iRNA_PseU:0 21394 chr20 55101093 55101093 1 + C A UCEC 55101092 + 55101072 55101112 41 AGATCCATACCATGTCACGATCTGTGAAATATGGGGAGAAG AGATCCATACCATGTCACGATATGTGAAATATGGGGAGAAG < 41bp 0.525130162118773 0.852778586171199 0.38184893 0.74046624 prediction 0.655296848104851 Functional Gain - FAM209A ENSG00000124103 CDS Human protein_coding chr20:55101092 chr20:55101093 synonymous SNV . 0 22 hPsi_associated_SNPs_27670 0 0 1 0 0 exosome 0.438813483949743 0.452032371586539 0.48093248 0 hPsi_site_21394 iPseU_CNN:0.48093248;iRNA_PseU:0 21395 chr9 124546136 124546136 1 + C A rs556287311 124546135 + 124546115 124546155 41 CAGATGAGCAGGAGCTTGGGTCTCTCTCGGCCCCTGTCTGT CAGATGAGCAGGAGCTTGGGTATCTCTCGGCCCCTGTCTGT < 41bp 0.523097809051003 0.850744342659836 0.30543798 0.5484101 prediction 0.655293067217667 Functional Gain - DAB2IP ENSG00000136848 UTR3 Human protein_coding chr9:124546135 chr9:124546136 . . 0 22 hPsi_associated_SNPs_27671 0 0 1 0 0 Ribosome 0.43871887869594 0.438718591107825 0.0968202 0 hPsi_site_21395 iPseU_CNN:0.0968202;iRNA_PseU:0 21396 chr19 36168793 36168793 1 + G A SKCM 36168792 + 36168772 36168812 41 TTGGGTTTGCCATCCTGATGTGGACGGTGAGAGGCGGGGAG TTGGGTTTGCCATCCTGATGTAGACGGTGAGAGGCGGGGAG < 41bp 0.424708726845269 0.827644935201704 0.30999282 0.5182976 prediction 0.655289870403408 Functional Gain - UPK1A ENSG00000105668 CDS Human protein_coding chr19:36168792 chr19:36168793 stopgain 0.998 0 22 hPsi_associated_SNPs_27672 0 0 0 1 2 exosome 0.43997682556303 0.438718979491838 0.0365952 0 hPsi_site_21396 iPseU_CNN:0.0365952;iRNA_PseU:0 21397 chr14 103803151 103803151 1 + C A UCS 103803150 + 103803130 103803170 41 GGATTCATTAAAAAATTTGTTCTCTGTCCTGAATGTGAGAA GGATTCATTAAAAAATTTGTTATCTGTCCTGAATGTGAGAA < 41bp 0.532064178550593 0.859708474415941 0.35650188 0.3624732 prediction 0.655288591730696 Functional Gain - EIF5 ENSG00000100664 CDS Human protein_coding chr14:103803150 chr14:103803151 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27673 0 0 1 0 1 Cytosol 0.438034437815566 0.438717177730032 0 0 hPsi_site_21397 iPseU_CNN:0;iRNA_PseU:0 21398 chr4 42403195 42403195 1 + G A SKCM 42403194 + 42403174 42403214 41 TCAGACAGAGACCCTGCCCATGATCCTGACCTCCACCAGCC TCAGACAGAGACCCTGCCCATAATCCTGACCTCCACCAGCC < 41bp 0.413748401064181 0.827641731270574 0.22037637 0.28931302 prediction 0.655283462541147 Functional Gain - SHISA3 ENSG00000178343 CDS Human protein_coding chr4:42403194 chr4:42403195 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27674 0 0 0 0 0 exosome 0.438718592908793 0.438718592995175 0 0 hPsi_site_21398 iPseU_CNN:0;iRNA_PseU:0 21399 chr5 141019735 141019735 1 + C T UCEC 141019736 - 141019716 141019756 41 GCTCTGGGGTTCCCTTCAAGTGCACGAGGGGTTAGGCTGCT GCTCTGGGGTTCCCTTCAAGTACACGAGGGGTTAGGCTGCT < 41bp 0.55808113612821 0.885715304556878 0.1955351 0.448147 prediction 0.655268336857338 Functional Gain - RELL2 ENSG00000164620 CDS Human protein_coding chr5:141019736 chr5:141019735 nonsynonymous SNV 0.894 0 22 hPsi_associated_SNPs_27675 0 0 1 0 0 chromatin 0.438718592993784 0.438718592292287 0 0 hPsi_site_21399 iPseU_CNN:0;iRNA_PseU:0 21400 chr1 1956825 1956825 1 + C A CESC 1956824 + 1956804 1956844 41 GGTGGCCAGCATCGACCACATCTCAGAGGCCAACATGGTAG GGTGGCCAGCATCGACCACATATCAGAGGCCAACATGGTAG < 41bp 0.52558894091215 0.853222837653177 0.39274326 0.5323252 prediction 0.655267793482053 Functional Gain - GABRD ENSG00000187730 CDS Human protein_coding chr1:1956824 chr1:1956825 synonymous SNV . 0 22 hPsi_associated_SNPs_27676 0 0 0 0 2 Cytosol 0.43861913953384 0.438876199861956 0.0646504000000001 0 hPsi_site_21400 iPseU_CNN:0.0646504000000001;iRNA_PseU:0 21401 chr6 88315688 88315688 1 + C A SKCM 88315687 + 88315667 88315707 41 GGAAGTCTAACAGAGGCCCTTCAGAATAATGTCACACCATA GGAAGTCTAACAGAGGCCCTTAAGAATAATGTCACACCATA < 41bp 0.472646613759167 0.827628203667538 0.2445395 0.32796037 prediction 0.655256407335076 Functional Gain - ORC3 ENSG00000135336 CDS Human protein_coding chr6:88315687 chr6:88315688 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_27677 0 0 1 0 2 Cytosol 0.438720152289439 0.438718578818947 0 0 hPsi_site_21401 iPseU_CNN:0;iRNA_PseU:0 21402 chr3 138341056 138341056 1 + C A UCEC 138341055 + 138341035 138341075 41 GATAAGAAAAGAGTGGATGTTCAAATTAGTGGGCAAAGAAA GATAAGAAAAGAGTGGATGTTAAAATTAGTGGGCAAAGAAA < 41bp 0.515317096585938 0.842944942036101 0.2835617 0.34581417 prediction 0.655255690900326 Functional Gain - FAIM ENSG00000158234 CDS Human protein_coding chr3:138341055 chr3:138341056 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_27678 0 0 1 0 1 Ribosome 0.438718591869318 0.438718591511244 0 0 hPsi_site_21402 iPseU_CNN:0;iRNA_PseU:0 21403 chr17 6930924 6930924 1 + C A UCEC 6930923 + 6930903 6930943 41 ACCAAAGTGCACTACCACATTCTCGGGGGGCCCTAGCTGAG ACCAAAGTGCACTACCACATTATCGGGGGGCCCTAGCTGAG < 41bp 0.521229249455769 0.848855425894471 0.44173595 0.41255116 prediction 0.655252352877405 Functional Gain - BCL6B ENSG00000161940 CDS Human protein_coding chr17:6930923 chr17:6930924 nonsynonymous SNV 0.895 2 22 hPsi_associated_SNPs_27679 0 0 0 0 0 Endoplasmic reticulum 0.438718625250522 0.438718592981898 0 0 hPsi_site_21403 iPseU_CNN:0;iRNA_PseU:0 21404 chr19 55493558 55493558 1 + G A SKCM 55493557 + 55493537 55493577 41 CAATAGGTGCAGGTATATATTGAAGACGAAGTTCCGGGAGA CAATAGGTGCAGGTATATATTAAAGACGAAGTTCCGGGAGA < 41bp 0.419529017439734 0.827624979993286 0.37494713 0.47095302 prediction 0.655249959986573 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55493557 chr19:55493558 synonymous SNV . 0 22 hPsi_associated_SNPs_27680 0 0 1 0 1 Cytosol 0.438718373715214 0.438722820855676 0 0 hPsi_site_21404 iPseU_CNN:0;iRNA_PseU:0 21405 chr5 40681608 40681608 1 + C A BLCA 40681607 + 40681587 40681627 41 GTACCCAGACACCTGGTGCTTCATCGACTGGACCACCAACG GTACCCAGACACCTGGTGCTTAATCGACTGGACCACCAACG < 41bp 0.466190776911906 0.827624747206271 0.2129524 0.3364822 prediction 0.655249494412542 Functional Gain - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681607 chr5:40681608 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27681 0 0 0 0 0 Cytosol 0.438718592514719 0.438718589867715 0 0 hPsi_site_21405 iPseU_CNN:0;iRNA_PseU:0 21406 chr15 75182954 75182954 1 + G A BLCA 75182953 + 75182933 75182973 41 GCGCGGCTGTTGGCCAGCAGTGATCCACTGGCCCAGATCGC GCGCGGCTGTTGGCCAGCAGTAATCCACTGGCCCAGATCGC < 41bp 0.412451510078906 0.827623836891209 0.29721138 0.44946438 prediction 0.655247673782418 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75182953 chr15:75182954 nonsynonymous SNV 0.924 2 22 hPsi_associated_SNPs_27682 0 0 1 0 2 Ribosome 0.438931225094332 0.438717158000744 0 0 hPsi_site_21406 iPseU_CNN:0;iRNA_PseU:0 21407 chr1 158817637 158817637 1 + C A LUSC 158817636 + 158817616 158817656 41 GAAAGGAGATAAACTTCGACTCTTCTGCCTTCAACTGAGAA GAAAGGAGATAAACTTCGACTATTCTGCCTTCAACTGAGAA < 41bp 0.47990775091345 0.827615257302514 0.26664937 0.36099267 prediction 0.655230514605028 Functional Gain - MNDA ENSG00000163563 CDS Human protein_coding chr1:158817636 chr1:158817637 synonymous SNV . 0 22 hPsi_associated_SNPs_27683 0 0 0 0 1 exosome 0.438718591302283 0.438712113594255 0 0 hPsi_site_21407 iPseU_CNN:0;iRNA_PseU:0 21408 chr6 90312810 90312810 1 + C T CESC 90312811 - 90312791 90312831 41 CAGGGCACACCCTTCGTGGATGAGCGCCGCGATGATCTCCG CAGGGCACACCCTTCGTGGATAAGCGCCGCGATGATCTCCG < 41bp 0.563600879690886 0.89121509834149 0.5468738 0.9389142 prediction 0.655228437301208 Functional Gain - ANKRD6 ENSG00000135299 CDS Human protein_coding chr6:90312811 chr6:90312810 synonymous SNV . 0 22 hPsi_associated_SNPs_27684 0 0 0 0 1 exosome 0.438722774145162 0.438719034940245 0.7840808 0 hPsi_site_21408 iPseU_CNN:0.7840808;iRNA_PseU:0 21409 chr15 66625865 66625865 1 + G A rs58317500 66625864 + 66625844 66625884 41 GGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACAC GGATCACGAGGTCAGGAGATTAAGACCATCCTGGCTAACAC < 41bp 0.457219845269332 0.827613840571855 0.65474385 0.72943455 prediction 0.655227681143711 Functional Gain - DIS3L ENSG00000166938 UTR3 Human protein_coding chr15:66625864 chr15:66625865 . . 0 22 hPsi_associated_SNPs_27685 0 0 0 0 0 chromatin 0.438717578605552 0.438723068271031 0.1493814 0 hPsi_site_21409 iPseU_CNN:0.1493814;iRNA_PseU:0 21410 chr5 75621260 75621260 1 + C A COAD 75621259 + 75621239 75621279 41 TGGGAAACTTAATATTTGGCTCTCTGGTCAGCATCACCAAA TGGGAAACTTAATATTTGGCTATCTGGTCAGCATCACCAAA < 41bp 0.522792445208557 0.850403451001381 0.67330766 0.7865095 prediction 0.655222011585649 Functional Gain - SV2C ENSG00000122012 CDS Human protein_coding chr5:75621259 chr5:75621260 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_27686 0 0 0 0 1 exosome 0.438716576182884 0.438686634306405 0.22640368 0 hPsi_site_21410 iPseU_CNN:0.22640368;iRNA_PseU:0 21411 chr12 132329741 132329741 1 + C A UCEC 132329740 + 132329720 132329760 41 CCGGGGTGAAGCTTTCTTCTTCAAAGGTACCTCCAGGGTTC CCGGGGTGAAGCTTTCTTCTTAAAAGGTACCTCCAGGGTTC < 41bp 0.527646440442941 0.855250694511816 0.2978477 0.5272622 prediction 0.655208508137749 Functional Gain - MMP17 ENSG00000198598 CDS Human protein_coding chr12:132329740 chr12:132329741 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_27687 0 0 0 0 2 Cytosol 0.438718592995102 0.438718592995102 0.0545244 0 hPsi_site_21411 iPseU_CNN:0.0545244;iRNA_PseU:0 21412 chr12 7173855 7173855 1 + C A UCEC 7173854 + 7173834 7173874 41 CTAAGGAAGACACTCCCAATTCTGTTTGGGAGCCTGCGAAG CTAAGGAAGACACTCCCAATTATGTTTGGGAGCCTGCGAAG < 41bp 0.542626408459903 0.87022601509349 0.21478873 0.30537373 prediction 0.655199213267173 Functional Gain - C1S ENSG00000182326 CDS Human protein_coding chr12:7173854 chr12:7173855 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_27688 0 0 1 0 2 Nucleus 0.438717503169696 0.438716844016499 0 0 hPsi_site_21412 iPseU_CNN:0;iRNA_PseU:0 21413 chr19 757354 757354 1 + G A rs35090443 757353 + 757333 757373 41 GGACGCTGACCCCAGGAGGCTGTGTGACCTGGAGCGGGAGC GGACGCTGACCCCAGGAGGCTATGTGACCTGGAGCGGGAGC < 41bp 0.566792824493876 0.894391929868642 0.27799574 0.2977608 prediction 0.655198210749532 Functional Gain - MISP ENSG00000099812 CDS Human protein_coding chr19:757353 chr19:757354 synonymous SNV . 0 22 hPsi_associated_SNPs_27689 0 0 0 0 0 nucleus 0.438712379677585 0.438715436479431 0 0 hPsi_site_21413 iPseU_CNN:0;iRNA_PseU:0 21414 chr3 32148229 32148229 1 + G A LUSC 32148228 + 32148208 32148248 41 CAGCGGCGCCCCTGAAAGTGTGCATCGTGGGCTCGGGGAAC CAGCGGCGCCCCTGAAAGTGTACATCGTGGGCTCGGGGAAC < 41bp 0.444989826527416 0.827596654033145 0.2798075 0.41187006 prediction 0.65519330806629 Functional Gain - GPD1L ENSG00000152642 CDS Human protein_coding chr3:32148228 chr3:32148229 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27690 0 0 0 0 1 Cytosol 0.43871866301905 0.438732895871363 0 0 hPsi_site_21414 iPseU_CNN:0;iRNA_PseU:0 21415 chr3 3168850 3168850 1 + C A rs547124419 3168849 + 3168829 3168869 41 GCCCCGACGCGGAGGTCGTGTCCCCGCCACGTTTCCGGCGA GCCCCGACGCGGAGGTCGTGTACCCGCCACGTTTCCGGCGA < 41bp 0.498913435073394 0.827592950853202 0.16737902 0.6406355 prediction 0.655185901706403 Functional Gain - TRNT1 ENSG00000072756 UTR5 Human protein_coding chr3:3168849 chr3:3168850 . . 0 22 hPsi_associated_SNPs_27691 0 0 0 0 0 Cytosol 0.438718019882041 0.438769354247159 0.281271 0 hPsi_site_21415 iPseU_CNN:0.281271;iRNA_PseU:0 21416 chr19 10943692 10943692 1 + G A UCEC 10943691 + 10943671 10943711 41 CTACGTGGGCACCGGGCGCTTGTCCTGGAAGAAGCGCTTGA CTACGTGGGCACCGGGCGCTTATCCTGGAAGAAGCGCTTGA < 41bp 0.440020211789235 0.827591862546319 0.20889679 0.44483444 prediction 0.655183725092637 Functional Gain - TMED1 ENSG00000079805;ENSG00000099203 CDS Human other chr19:10943691 chr19:10943692 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27692 0 0 1 0 0 Ribosome 0.438719718505516 0.438732902887996 0 0 hPsi_site_21416 iPseU_CNN:0;iRNA_PseU:0 21417 chr1 160313217 160313217 1 + G A LUAD 160313216 + 160313196 160313236 41 GCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTCGGGGTCT GCAGGGGGTGGCTCTGGGGCTAACCCGGGAAGTCGGGGTCT < 41bp 0.466280003395593 0.82759183001661 0.1919029 0.31332195 prediction 0.65518366003322 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160313216 chr1:160313217 nonsynonymous SNV 0.985 0 22 hPsi_associated_SNPs_27693 0 0 1 0 1 Endoplasmic reticulum 0.438718182154368 0.438718592995107 0 0 hPsi_site_21417 iPseU_CNN:0;iRNA_PseU:0 21418 chr2 73145350 73145350 1 + G A GBM 73145349 + 73145329 73145369 41 GCTCGTGTTCCCCGAGGCCATGAACCACCCCGCGCTGACCG GCTCGTGTTCCCCGAGGCCATAAACCACCCCGCGCTGACCG < 41bp 0.555410577041651 0.882997003401836 0.30329674 0.42184862 prediction 0.65517285272037 Functional Gain - EMX1 ENSG00000135638 CDS Human protein_coding chr2:73145349 chr2:73145350 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_27694 0 0 0 0 0 exosome 0.438721490653057 0.435506817175256 0 0 hPsi_site_21418 iPseU_CNN:0;iRNA_PseU:0 21419 chr19 20230091 20230091 1 + G A LUAD 20230090 + 20230070 20230110 41 ATGTGGCAAAGCTTTTAACTTGTCCTCAGACCTTAATACAC ATGTGGCAAAGCTTTTAACTTATCCTCAGACCTTAATACAC < 41bp 0.447747771577723 0.82758603298346 0.22931123 0.5763375 prediction 0.655172065966919 Functional Gain - ZNF90 ENSG00000213988 CDS Human protein_coding chr19:20230090 chr19:20230091 synonymous SNV . 0 22 hPsi_associated_SNPs_27695 0 0 0 0 0 exosome 0.438718062166369 0.438718405478072 0.152675 0 hPsi_site_21419 iPseU_CNN:0.152675;iRNA_PseU:0 21420 chr1 152770396 152770396 1 + C A STAD 152770395 + 152770375 152770415 41 AGTCTCTTCCTGCTGCAGTGTCAGCTCCGGAGGCTGCTGTG AGTCTCTTCCTGCTGCAGTGTAAGCTCCGGAGGCTGCTGTG < 41bp 0.519599196855808 0.847178790828775 0.27698773 0.6477351 prediction 0.655159187945933 Functional Gain - LCE1D ENSG00000172155 CDS Human protein_coding chr1:152770395 chr1:152770396 synonymous SNV . 0 22 hPsi_associated_SNPs_27696 0 0 0 0 0 unknown 0.438578898866638 0.438570956036256 0.2954702 0 hPsi_site_21420 iPseU_CNN:0.2954702;iRNA_PseU:0 21421 chr12 55759740 55759740 1 + C A LUSC 55759739 + 55759719 55759759 41 CAATACCTCAGTGGCTCCTCTCTTGAATCCCTTCATATACA CAATACCTCAGTGGCTCCTCTATTGAATCCCTTCATATACA < 41bp 0.491493465878558 0.827577392810999 0.3412019 0.53793496 prediction 0.655154785621998 Functional Gain - OR6C75 ENSG00000187857 CDS Human protein_coding chr12:55759739 chr12:55759740 synonymous SNV . 0 22 hPsi_associated_SNPs_27697 0 0 0 0 0 unknown 0.438718947075205 0.438718311382321 0.0758699199999999 0 hPsi_site_21421 iPseU_CNN:0.0758699199999999;iRNA_PseU:0 21422 chr11 1977518 1977518 1 + G A BLCA 1977517 + 1977497 1977537 41 GACCTTCACGTTCCCAGATCTGTTTCCCGAGAAAGACGAGA GACCTTCACGTTCCCAGATCTATTTCCCGAGAAAGACGAGA < 41bp 0.563675997726737 0.891248658343986 0.4223061 0.8021219 prediction 0.655145321234498 Functional Gain - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1977517 chr11:1977518 synonymous SNV . 0 22 hPsi_associated_SNPs_27698 0 0 1 0 1 Ribosome 0.438703297090068 0.438715968415921 0.6042438 0 hPsi_site_21422 iPseU_CNN:0.6042438;iRNA_PseU:0 21423 chr19 41633861 41633861 1 + C A BLCA 41633860 + 41633840 41633880 41 CATGGAGCTCTTTCTGTACCTCACCGCCATCCTGCAGAGCT CATGGAGCTCTTTCTGTACCTAACCGCCATCCTGCAGAGCT < 41bp 0.484175219209385 0.827567473100948 0.14317146 0.63379943 prediction 0.655134946201895 Functional Gain - CYP2F1 ENSG00000197446 CDS Human protein_coding chr19:41633860 chr19:41633861 synonymous SNV . 0 22 hPsi_associated_SNPs_27699 0 0 0 0 1 exosome 0.438718598727859 0.438718591859634 0.26759886 0 hPsi_site_21423 iPseU_CNN:0.26759886;iRNA_PseU:0 21424 chr4 1804696 1804696 1 + C A KIRC 1804695 + 1804675 1804715 41 GCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGCGAG GCCTCCGCCTGGCCAATGTGTAGGAGCGGGACGGGGGCGAG < 41bp 0.471060489459005 0.827565690972403 0.38934082 0.8060459 prediction 0.655131381944807 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1804695 chr4:1804696 stopgain 1.000 0 22 hPsi_associated_SNPs_27700 0 0 1 0 2 Ribosome 0.438716475490424 0.438719582107533 0.6120918 0 hPsi_site_21424 iPseU_CNN:0.6120918;iRNA_PseU:0 21425 chr2 17962260 17962260 1 + C A UCEC 17962259 + 17962239 17962279 41 CTATTGACTGGGAAGGTACTTCTTTTAGTAATTCTCCAGCT CTATTGACTGGGAAGGTACTTATTTTAGTAATTCTCCAGCT < 41bp 0.485868045970101 0.827565012940363 0.29867816 0.3158415 prediction 0.655130025880727 Functional Gain - GEN1 ENSG00000178295 CDS Human protein_coding chr2:17962259 chr2:17962260 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27701 0 0 1 0 0 Nucleus 0.438718743453953 0.438718602492064 0 0 hPsi_site_21425 iPseU_CNN:0;iRNA_PseU:0 21426 chr5 131630330 131630330 1 + G A DLBC 131630329 + 131630309 131630349 41 CATGCGGGACTACGACGAGGTGATCGCCTTCCTGGGCGAGT CATGCGGGACTACGACGAGGTAATCGCCTTCCTGGGCGAGT < 41bp 0.419193958049643 0.827562998874108 0.372973 0.96097267 prediction 0.655125997748216 Functional Gain - SLC22A4 ENSG00000197208 CDS Human protein_coding chr5:131630329 chr5:131630330 synonymous SNV . 0 22 hPsi_associated_SNPs_27702 0 0 0 0 0 Endoplasmic reticulum 0.439107067399965 0.438843252050096 0.92194534 0 hPsi_site_21426 iPseU_CNN:0.92194534;iRNA_PseU:0 21427 chr9 90500153 90500153 1 + C A STAD 90500152 + 90500132 90500172 41 CCTTCACCACAGCCGCATGGTCCCCTGGCCTCCTCTCCACC CCTTCACCACAGCCGCATGGTACCCTGGCCTCCTCTCCACC < 41bp 0.470785293829969 0.827561843267256 0.2638773 0.6739914 prediction 0.655123686534512 Functional Gain - SPATA31E1 ENSG00000177992 CDS Human protein_coding chr9:90500152 chr9:90500153 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27703 0 0 0 0 1 exosome 0.441130874886981 0.438718781659771 0.3479828 0 hPsi_site_21427 iPseU_CNN:0.3479828;iRNA_PseU:0 Red blood cell count 21428 chr10 70940254 70940254 1 + G A BLCA 70940253 + 70940233 70940273 41 CTTGTTCGTGCCCCTGACTGTGAAACCTCAGGGCCCCAGCG CTTGTTCGTGCCCCTGACTGTAAAACCTCAGGGCCCCAGCG < 41bp 0.462358528323269 0.827560033605681 0.47337666 0.819175 prediction 0.655120067211362 Functional Gain - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70940253 chr10:70940254 synonymous SNV . 0 22 hPsi_associated_SNPs_27704 0 0 1 0 0 Cytosol 0.438718596266362 0.438718658049843 0.63835 0 hPsi_site_21428 iPseU_CNN:0.63835;iRNA_PseU:0 21429 chr20 32256055 32256055 1 + G A rs73261831 32256054 + 32256034 32256074 41 TCAACTGAGTCAGGCTGGACTGGGGGGGGTGGCACTGCGTT TCAACTGAGTCAGGCTGGACTAGGGGGGGTGGCACTGCGTT < 41bp 0.460807315540124 0.827557187950522 0.31016847 0.56178486 prediction 0.655114375901044 Functional Gain - ACTL10 ENSG00000182584 UTR3 Human protein_coding chr20:32256054 chr20:32256055 . . 0 22 hPsi_associated_SNPs_27705 0 0 1 0 0 exosome 0.438718581859765 0.438721958174952 0.12356972 0 hPsi_site_21429 iPseU_CNN:0.12356972;iRNA_PseU:0 21430 chr2 108863728 108863728 1 + C A rs114486672 108863727 + 108863707 108863747 41 CATCATGGAAGTAGATGGAGTCCCTACGTTGATATTATCAA CATCATGGAAGTAGATGGAGTACCTACGTTGATATTATCAA < 41bp 0.506789650315957 0.834343964411074 0.21756831 0.3281953 prediction 0.655108628190233 Functional Gain - SULT1C3 ENSG00000196228 CDS Human protein_coding chr2:108863727 chr2:108863728 synonymous SNV . 0 22 hPsi_associated_SNPs_27706 0 0 0 0 1 exosome 0.438718593078825 0.438719150659413 0 0 hPsi_site_21430 iPseU_CNN:0;iRNA_PseU:0 Red blood cell count 21431 chr17 7950294 7950294 1 + C A UCEC 7950293 + 7950273 7950313 41 ATGAAGCAGCTGAACTATTCTCTCCTGTGTCTGCCTGAGGA ATGAAGCAGCTGAACTATTCTATCCTGTGTCTGCCTGAGGA < 41bp 0.458379355020485 0.827553647212238 0.35939127 0.3444201 prediction 0.655107294424475 Functional Gain - ALOX15B ENSG00000179593 CDS Human protein_coding chr17:7950293 chr17:7950294 nonsynonymous SNV 0.906 1 22 hPsi_associated_SNPs_27707 0 0 0 0 2 exosome 0.439576672352917 0.438845795907612 0 0 hPsi_site_21431 iPseU_CNN:0;iRNA_PseU:0 21432 chr5 133478723 133478723 1 + G A BRCA 133478722 + 133478702 133478742 41 GAAGAGCAGGCCAAGTACTATGAGCTGGCCCGCAAGGAGAG GAAGAGCAGGCCAAGTACTATAAGCTGGCCCGCAAGGAGAG < 41bp 0.57446903472797 0.902020042111176 0.28490484 0.38628572 prediction 0.655102014766413 Functional Gain - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133478722 chr5:133478723 nonsynonymous SNV 0.993 5 22 hPsi_associated_SNPs_27708 0 0 1 0 2 Cytosol 0.438718593145884 0.438718592996722 0 0 hPsi_site_21432 iPseU_CNN:0;iRNA_PseU:0 21433 chr8 6338302 6338302 1 + G A BLCA 6338301 + 6338281 6338321 41 TCAATTGCACCAGACGTCTGTGAGACCACGACTCACGTGCT TCAATTGCACCAGACGTCTGTAAGACCACGACTCACGTGCT < 41bp 0.43417916104213 0.827544095001363 0.30657136 0.63304716 prediction 0.655088190002725 Functional Gain - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6338301 chr8:6338302 nonsynonymous SNV 0.211 2 22 hPsi_associated_SNPs_27709 0 0 1 0 2 Nucleus 0.438940820960268 0.438700416208613 0.26609432 0 hPsi_site_21433 iPseU_CNN:0.26609432;iRNA_PseU:0 21434 chr16 3016224 3016224 1 + C A LUSC 3016223 + 3016203 3016243 41 GGCGCTACTGCGACATCCCCTCCTGTCACAGTGAGTAGCGC GGCGCTACTGCGACATCCCCTACTGTCACAGTGAGTAGCGC < 41bp 0.459055768067893 0.827543409210694 0.26396674 0.34571654 prediction 0.655086818421388 Functional Gain - KREMEN2 ENSG00000131650 CDS Human protein_coding chr16:3016223 chr16:3016224 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_27710 0 0 0 0 2 chromatin 0.438717899188402 0.43905206296163 0 0 hPsi_site_21434 iPseU_CNN:0;iRNA_PseU:0 21435 chr17 18141383 18141383 1 + G A UCEC 18141382 + 18141362 18141402 41 GGACCCTGTCTTCCCCCAGGTGCACTCTTCACCCCAATGAC GGACCCTGTCTTCCCCCAGGTACACTCTTCACCCCAATGAC < 41bp 0.548677417059009 0.876216537333069 0.58537173 0.8169383 prediction 0.65507824054812 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18141382 chr17:18141383 nonsynonymous SNV 0.946 4 22 hPsi_associated_SNPs_27711 0 0 1 0 1 Cytosol 0.438717627937067 0.438734757343644 0.46313314 0 hPsi_site_21435 iPseU_CNN:0.46313314;iRNA_PseU:0 21436 chr2 88405954 88405954 1 + C A LUSC 88405953 + 88405933 88405973 41 TTCGGAGGTCCTTTCCTACCTCCAGGCCTTTGAGGAGGCCT TTCGGAGGTCCTTTCCTACCTACAGGCCTTTGAGGAGGCCT < 41bp 0.471937955268021 0.827533869545375 0.38018337 0.6983619 prediction 0.65506773909075 Functional Gain - SMYD1 ENSG00000115593 CDS Human protein_coding chr2:88405953 chr2:88405954 synonymous SNV . 0 22 hPsi_associated_SNPs_27712 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0.3967238 0 hPsi_site_21436 iPseU_CNN:0.3967238;iRNA_PseU:0 21437 chr1 248636721 248636721 1 + G A rs144511210 248636720 + 248636700 248636740 41 TTCACCCTCACGGGACTCTTTGCTGAGAGCAAGCATGCTGC TTCACCCTCACGGGACTCTTTACTGAGAGCAAGCATGCTGC < 41bp 0.547066917413748 0.874592122058848 0.29599857 0.6733281 prediction 0.655050409290199 Functional Gain - OR2T3 ENSG00000196539 CDS Human protein_coding chr1:248636720 chr1:248636721 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27713 0 0 0 0 0 unknown 0.438711089090638 0.438718878112312 0.3466562 0 hPsi_site_21437 iPseU_CNN:0.3466562;iRNA_PseU:0 21438 chr6 37403475 37403475 1 + G T SARC 37403474 + 37403454 37403494 41 AAAAAAAGAGTTGCAGAGCTTGCCCTGAGCCTCAGCTCCAC AAAAAAAGAGTTGCAGAGCTTTCCCTGAGCCTCAGCTCCAC < 41bp 0.508413623820313 0.835936779514801 0.2630096 0.5870014 prediction 0.655046311388976 Functional Gain - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37403474 chr6:37403475 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_27714 0 0 1 0 2 Endoplasmic reticulum 0.438718592994976 0.438718592830141 0.1740028 0 hPsi_site_21438 iPseU_CNN:0.1740028;iRNA_PseU:0 21439 chrX 107319427 107319427 1 + C A UCEC 107319426 + 107319406 107319446 41 CAAAGGCAAAAGAAAGAAATTCTAAGACCATCGCGGAACTT CAAAGGCAAAAGAAAGAAATTATAAGACCATCGCGGAACTT < 41bp 0.479563999623 0.827522350002352 0.31408074 0.35741866 prediction 0.655044700004705 Functional Gain - VSIG1 ENSG00000101842 CDS Human protein_coding chrX:107319426 chrX:107319427 nonsynonymous SNV 0.075 2 22 hPsi_associated_SNPs_27715 0 0 0 0 1 Nucleus 0.438718598234447 0.438718592959612 0 0 hPsi_site_21439 iPseU_CNN:0;iRNA_PseU:0 21440 chr17 74382953 74382953 1 + G A COAD 74382952 + 74382932 74382972 41 ATTGCTGTGCCGCCGGCTGCTGTCACCCATGAACCTGCTGT ATTGCTGTGCCGCCGGCTGCTATCACCCATGAACCTGCTGT < 41bp 0.566543694096266 0.894057744289051 0.21231678 0.45079744 prediction 0.65502810038557 Functional Gain - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74382952 chr17:74382953 synonymous SNV . 0 22 hPsi_associated_SNPs_27716 0 0 1 0 1 nucleolus 0.438727583487672 0.438713375253791 0 0 hPsi_site_21440 iPseU_CNN:0;iRNA_PseU:0 21441 chr19 11224402 11224402 1 + C A OV 11224401 + 11224381 11224421 41 CGTTATTCAGGGAGAACGGCTCCAAGCCAAGGGCCATCGTG CGTTATTCAGGGAGAACGGCTACAAGCCAAGGGCCATCGTG < 41bp 0.465929969022652 0.827513975331031 0.9094957 0.92199445 prediction 0.655027950662062 Functional Gain - LDLR ENSG00000130164 CDS Human protein_coding chr19:11224401 chr19:11224402 nonsynonymous SNV 0.067 4 22 hPsi_associated_SNPs_27717 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592958366 0.0249975 0 hPsi_site_21441 iPseU_CNN:0.0249975;iRNA_PseU:0 21442 chr17 6690652 6690652 1 + G A BRCA 6690651 + 6690631 6690671 41 ACAAACAGATATGAGACGAATGAAGAGGACAAGACCCTGCA ACAAACAGATATGAGACGAATAAAGAGGACAAGACCCTGCA < 41bp 0.438442642397504 0.827513196340522 0.22432688 0.4844293 prediction 0.655026392681045 Functional Gain - FBXO39 ENSG00000177294 CDS Human protein_coding chr17:6690651 chr17:6690652 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_27718 0 0 0 0 1 exosome 0.438690774843776 0.43867173920388 0 0 hPsi_site_21442 iPseU_CNN:0;iRNA_PseU:0 21443 chr8 123964589 123964589 1 + C A STAD 123964588 + 123964568 123964608 41 CAAATGCCACGATGATCAACTCTTTCAACAAGTTTCCTTAC CAAATGCCACGATGATCAACTATTTCAACAAGTTTCCTTAC < 41bp 0.468109895124221 0.8275125409652 0.35832584 0.4115668 prediction 0.6550250819304 Functional Gain - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964588 chr8:123964589 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27719 0 0 1 0 0 Nucleus 0.438718272186446 0.438717200736528 0 0 hPsi_site_21443 iPseU_CNN:0;iRNA_PseU:0 21444 chr22 19711509 19711509 1 + C A rs536874549 19711508 + 19711488 19711528 41 GCCGCGGGCTGACTTGGGCCTCGCTGCCGACCGCCTTCCCT GCCGCGGGCTGACTTGGGCCTAGCTGCCGACCGCCTTCCCT < 41bp 0.503454058780935 0.830966400694375 0.25858122 0.5168215 prediction 0.655024683826879 Functional Gain - GP1BB ENSG00000203618 CDS Human protein_coding chr22:19711508 chr22:19711509 stopgain 0.482 0 22 hPsi_associated_SNPs_27720 0 0 1 0 0 Cytosol 0.438718690545958 0.438718583620006 0.0336430000000001 0 hPsi_site_21444 iPseU_CNN:0.0336430000000001;iRNA_PseU:0 21445 chr9 91616669 91616669 1 + G T GBM 91616668 + 91616648 91616688 41 GCCTGCACAATCTCCCTGACTGCTCTACCATCCTGCCCCTC GCCTGCACAATCTCCCTGACTTCTCTACCATCCTGCCCCTC < 41bp 0.504191214710731 0.831694470923479 0.25368232 0.58003473 prediction 0.655006512425496 Functional Gain - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616668 chr9:91616669 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27721 0 0 1 0 0 cytosol 0.438718315062745 0.438718592935666 0.16006946 0 hPsi_site_21445 iPseU_CNN:0.16006946;iRNA_PseU:0 21446 chr19 36273308 36273308 1 + G A rs35297478 36273307 + 36273287 36273327 41 CAGTGAGAGGATCCCGGAGCTGTCTGGCCCTGCATTCCTGC CAGTGAGAGGATCCCGGAGCTATCTGGCCCTGCATTCCTGC < 41bp 0.576549558992443 0.904052586126982 0.41068473 0.58360213 prediction 0.655006054269078 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36273307 chr19:36273308 synonymous SNV . 0 22 hPsi_associated_SNPs_27722 0 0 1 0 1 chromatin 0.438719405681776 0.43869626170032 0.16720426 0 hPsi_site_21446 iPseU_CNN:0.16720426;iRNA_PseU:0 21447 chrX 120182259 120182259 1 + G A STAD 120182258 + 120182238 120182278 41 TCCTGGATTGCTGATACCTATGCCAGCACCATAGGGCACTA TCCTGGATTGCTGATACCTATACCAGCACCATAGGGCACTA < 41bp 0.563664836181571 0.891165850330703 0.25850552 0.4433843 prediction 0.655002028298262 Functional Gain - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120182258 chrX:120182259 nonsynonymous SNV 0.793 2 22 hPsi_associated_SNPs_27723 0 0 1 0 0 Ribosome 0.438718593075506 0.438718592994079 0 0 hPsi_site_21447 iPseU_CNN:0;iRNA_PseU:0 21448 chr7 37780268 37780268 1 + G A STAD 37780267 + 37780247 37780287 41 GCTGCCCTTCTGCAAATTTGTGAGTGCCATGCTGCACATCC GCTGCCCTTCTGCAAATTTGTAAGTGCCATGCTGCACATCC < 41bp 0.562865448996052 0.890364714795164 0.30681273 0.7899195 prediction 0.654998531598224 Functional Gain - GPR141 ENSG00000187037 CDS Human protein_coding chr7:37780267 chr7:37780268 synonymous SNV . 0 22 hPsi_associated_SNPs_27724 0 0 0 0 0 exosome 0.438727039478647 0.439001018592757 0.579839 0 hPsi_site_21448 iPseU_CNN:0.579839;iRNA_PseU:0 21449 chr14 90651281 90651281 1 + C A UCEC 90651280 + 90651260 90651300 41 ACTGGCCCGGGACAATGAATTCTCAGGGGGGGTGGGAGCCT ACTGGCCCGGGACAATGAATTATCAGGGGGGGTGGGAGCCT < 41bp 0.538054130959462 0.865553140126764 0.31944218 0.42929107 prediction 0.654998018334604 Functional Gain - KCNK13 ENSG00000152315 CDS Human protein_coding chr14:90651280 chr14:90651281 nonsynonymous SNV 0.674 1 22 hPsi_associated_SNPs_27725 0 0 0 0 0 exosome 0.438718564071954 0.438674061930058 0 0 hPsi_site_21449 iPseU_CNN:0;iRNA_PseU:0 21450 chr10 95660597 95660597 1 + G A HNSC 95660596 + 95660576 95660616 41 GCCATGATGCTTATATACTATGCTTACCAGACAATGTCCCT GCCATGATGCTTATATACTATACTTACCAGACAATGTCCCT < 41bp 0.423112509023936 0.827493873352643 0.25877517 0.759789 prediction 0.654987746705286 Functional Gain - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660596 chr10:95660597 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_27726 0 0 1 0 1 exosome 0.438787396005034 0.439083085719818 0.519578 0 hPsi_site_21450 iPseU_CNN:0.519578;iRNA_PseU:0 21451 chr11 124745497 124745497 1 + G A LUAD 124745496 + 124745476 124745516 41 ACAGGGAGTGGCGGTGGCCTTGGGGGGTGATGGCAACAGCA ACAGGGAGTGGCGGTGGCCTTAGGGGGTGATGGCAACAGCA < 41bp 0.409005545154287 0.827492458863824 0.25635448 0.5796399 prediction 0.654984917727649 Functional Gain - ROBO3 ENSG00000154134 CDS Human protein_coding chr11:124745496 chr11:124745497 synonymous SNV . 0 22 hPsi_associated_SNPs_27727 0 0 0 0 2 exosome 0.438718541341348 0.438717334589734 0.1592798 0 hPsi_site_21451 iPseU_CNN:0.1592798;iRNA_PseU:0 21452 chr17 47591232 47591232 1 + G A rs542907794 47591231 + 47591211 47591251 41 GTCCATGATGGAGTCAGGTTTGGGGTTCGTGGAAAGGGTGC GTCCATGATGGAGTCAGGTTTAGGGTTCGTGGAAAGGGTGC < 41bp 0.434186174256135 0.827491694340198 0.35931784 0.6663252 prediction 0.654983388680396 Functional Gain - LOC100288866 ENSG00000249906 ncRNA_intronic Human antisense chr17:47591231 chr17:47591232 . . 0 22 hPsi_associated_SNPs_27728 0 0 0 0 0 unknown 0.438718595075108 0.438718614923103 0.3326504 0 hPsi_site_21452 iPseU_CNN:0.3326504;iRNA_PseU:0 21453 chr1 18807986 18807986 1 + G A SKCM 18807985 + 18807965 18808005 41 GAACCGAAGAGCTCCCCAGCTGGACTCATTGCAGCAGCCGA GAACCGAAGAGCTCCCCAGCTAGACTCATTGCAGCAGCCGA < 41bp 0.459181200999303 0.827491615614127 0.6550816 0.85359555 prediction 0.654983231228254 Functional Gain - KLHDC7A ENSG00000179023 CDS Human protein_coding chr1:18807985 chr1:18807986 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_27729 0 0 0 0 0 Cytosol 0.437634123570749 0.438720039413427 0.3970279 0 hPsi_site_21453 iPseU_CNN:0.3970279;iRNA_PseU:0 21454 chrX 120182347 120182347 1 + C A ESCA 120182346 + 120182326 120182366 41 GGGGAATCCATGGACGCATCTCTGCTACTGGCCGTGGTGTC GGGGAATCCATGGACGCATCTATGCTACTGGCCGTGGTGTC < 41bp 0.470711920168559 0.827491157111871 0.18733919 0.3343017 prediction 0.654982314223741 Functional Gain - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120182346 chrX:120182347 nonsynonymous SNV 0.461 5 22 hPsi_associated_SNPs_27730 0 0 0 0 0 Ribosome 0.438719149015728 0.437950960472891 0 0 hPsi_site_21454 iPseU_CNN:0;iRNA_PseU:0 21455 chr17 40716040 40716040 1 + C A UCEC 40716039 + 40716019 40716059 41 TGTGGAACATCTGAGTGAATTCCTGGTGGACATCAAGCCCT TGTGGAACATCTGAGTGAATTACTGGTGGACATCAAGCCCT < 41bp 0.54441745729591 0.871905903098142 0.21504304 0.61092114 prediction 0.654976891604466 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40716039 chr17:40716040 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27731 0 0 1 0 1 Ribosome 0.46191945894158 0.43854578004146 0.22184228 0 hPsi_site_21455 iPseU_CNN:0.22184228;iRNA_PseU:0 21456 chr3 19492756 19492756 1 + C A UCEC 19492755 + 19492735 19492775 41 CCAGCCGGGGCTGCCTCAGGTCTCTGTCTCTACACATCAAA CCAGCCGGGGCTGCCTCAGGTATCTGTCTCTACACATCAAA < 41bp 0.527764046279806 0.855251362914097 0.3541252 0.66639394 prediction 0.654974633268582 Functional Gain - KCNH8 ENSG00000183960 CDS Human protein_coding chr3:19492755 chr3:19492756 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27732 0 0 0 0 0 exosome 0.438747184486331 0.438970698962544 0.33278788 0 hPsi_site_21456 iPseU_CNN:0.33278788;iRNA_PseU:0 21457 chr6 158927669 158927669 1 + C A GBM 158927668 + 158927648 158927688 41 TCTAGACTTCCAGTATCCGTTCTCAGCCGTGCAGGCCTTTG TCTAGACTTCCAGTATCCGTTATCAGCCGTGCAGGCCTTTG < 41bp 0.516562787362083 0.844045299145422 0.44201475 0.69669545 prediction 0.654965023566679 Functional Gain - TULP4 ENSG00000130338 CDS Human protein_coding chr6:158927668 chr6:158927669 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_27733 0 0 0 0 1 Ribosome 0.438720008648554 0.438742117499858 0.3933909 0 hPsi_site_21457 iPseU_CNN:0.3933909;iRNA_PseU:0 21458 chr22 21742739 21742739 1 + C A UCEC 21742738 + 21742718 21742758 41 AGACTGATAGGAGGTGGCGTTCTCCGGCCCAAGGGCACCTG AGACTGATAGGAGGTGGCGTTATCCGGCCCAAGGGCACCTG < 41bp 0.51373096955465 0.841211614340189 0.26627395 0.42921254 prediction 0.654961289571077 Functional Gain - RIMBP3B;RIMBP3C ENSG00000196934 CDS Human other chr22:21742738 chr22:21742739 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27734 0 0 0 0 0 unknown 0.438718733112199 0.438667172588661 0 0 hPsi_site_21458 iPseU_CNN:0;iRNA_PseU:0 21459 chr16 1812999 1812999 1 + C A LGG 1812998 + 1812978 1813018 41 CAGCCGGCCCCTGGAATTCTTCCCTGACGAGTGAGTGTCCC CAGCCGGCCCCTGGAATTCTTACCTGACGAGTGAGTGTCCC < 41bp 0.463132055638602 0.827479474748619 0.32082385 0.67328155 prediction 0.654958949497238 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1812998 chr16:1812999 nonsynonymous SNV 0.874 1 22 hPsi_associated_SNPs_27735 0 0 1 0 1 chromatin 0.438718620391595 0.438718602056294 0.3465631 0 hPsi_site_21459 iPseU_CNN:0.3465631;iRNA_PseU:0 21460 chr9 90343545 90343545 1 + G T DLBC 90343544 + 90343524 90343564 41 TTTAGTGCTACTGGTGCTCTTGAAGGACAGATGTTCCGGAA TTTAGTGCTACTGGTGCTCTTTAAGGACAGATGTTCCGGAA < 41bp 0.491535273366184 0.827478541000037 0.26395878 0.29633832 prediction 0.654957082000074 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90343544 chr9:90343545 stopgain 0.671 1 22 hPsi_associated_SNPs_27736 0 0 1 0 0 Ribosome 0.438718592853037 0.438718593476894 0 0 hPsi_site_21460 iPseU_CNN:0;iRNA_PseU:0 21461 chr5 68467184 68467184 1 + C A UCEC 68467183 + 68467163 68467203 41 CAGGCTTTCTCTGATGTAATTCTTGCAGTAAATGATGTGGA CAGGCTTTCTCTGATGTAATTATTGCAGTAAATGATGTGGA < 41bp 0.464409515727633 0.827477482102122 0.18413639 0.27391607 prediction 0.654954964204244 Functional Gain - CCNB1 ENSG00000134057 CDS Human protein_coding chr5:68467183 chr5:68467184 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27737 0 0 1 0 2 Ribosome 0.439361171564081 0.437998553817068 0 0 hPsi_site_21461 iPseU_CNN:0;iRNA_PseU:0 21462 chr16 1395041 1395041 1 + C A UCEC 1395040 + 1395020 1395060 41 CCTGGAGGTGGCCTCGGGGCTCTTTGAGCTCTACCTGACCC CCTGGAGGTGGCCTCGGGGCTATTTGAGCTCTACCTGACCC < 41bp 0.455302551481424 0.827469014527658 0.7686214 0.7682864 prediction 0.654938029055316 Functional Gain - BAIAP3 ENSG00000007516 CDS Human protein_coding chr16:1395040 chr16:1395041 synonymous SNV . 0 22 hPsi_associated_SNPs_27738 0 0 1 0 2 chromatin 0.438718577521236 0.439762528799637 0 0 hPsi_site_21462 iPseU_CNN:0;iRNA_PseU:0 21463 chr11 55606618 55606618 1 + C A UCEC 55606617 + 55606597 55606637 41 CACTTTGTGGCCATTTGCAATCCTCTGCTCTACACAGTTGC CACTTTGTGGCCATTTGCAATACTCTGCTCTACACAGTTGC < 41bp 0.517280407306381 0.844748172169269 0.3728577 0.89305747 prediction 0.654935529725776 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606617 chr11:55606618 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_27739 0 0 0 0 0 unknown 0.438492435726174 0.438718527150645 0.78611494 0 hPsi_site_21463 iPseU_CNN:0.78611494;iRNA_PseU:0 21464 chr10 82187220 82187220 1 + G A LUSC 82187219 + 82187199 82187239 41 GAAGGAGAAGGCTTCATCCTTGGGGGAGTTTTCGTGGTGGG GAAGGAGAAGGCTTCATCCTTAGGGGAGTTTTCGTGGTGGG < 41bp 0.575843247967948 0.903310195632557 0.42476356 0.742269 prediction 0.654933895329217 Functional Gain - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82187219 chr10:82187220 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_27740 0 0 1 0 1 Ribosome 0.438746951064667 0.438719012966999 0.484538 0 hPsi_site_21464 iPseU_CNN:0.484538;iRNA_PseU:0 21465 chr20 48504386 48504386 1 + C A COAD 48504385 + 48504365 48504405 41 GGACCTGCACCACGGGCGCATCCAGATGAAAACTCTCACCA GGACCTGCACCACGGGCGCATACAGATGAAAACTCTCACCA < 41bp 0.471229590972392 0.827461709430037 0.6046232 0.84199893 prediction 0.654923418860073 Functional Gain - SLC9A8 ENSG00000197818 CDS Human protein_coding chr20:48504385 chr20:48504386 synonymous SNV . 0 22 hPsi_associated_SNPs_27741 0 0 0 0 1 Nucleus 0.43877943215716 0.438410869928757 0.47475146 0 hPsi_site_21465 iPseU_CNN:0.47475146;iRNA_PseU:0 21466 chr3 52558464 52558464 1 + G A rs139183709 52558463 + 52558443 52558483 41 GGCAGGAGGGGCTGAGGGCCTGTCCCAGACAATAAAGGTGC GGCAGGAGGGGCTGAGGGCCTATCCCAGACAATAAAGGTGC < 41bp 0.488344962987366 0.827460689655882 0.2366654 0.4000319 prediction 0.654921379311763 Functional Gain - NT5DC2;STAB1 ENSG00000010327;ENSG00000168268 UTR3 Human other chr3:52558463 chr3:52558464 . . 0 22 hPsi_associated_SNPs_27742 0 0 0 0 0 unknown 0.438718591922241 0.438718591715594 0 0 hPsi_site_21466 iPseU_CNN:0;iRNA_PseU:0 21467 chr5 153832968 153832968 1 + C A UCEC 153832967 + 153832947 153832987 41 TCCTCTTCTCCCTAGGTTGATCTGTTCCAGCTGCAGGTGAA TCCTCTTCTCCCTAGGTTGATATGTTCCAGCTGCAGGTGAA < 41bp 0.529855677633045 0.857312837307244 0.35945594 0.483578 prediction 0.654914319348397 Functional Gain - SAP30L ENSG00000164576 CDS Human protein_coding chr5:153832967 chr5:153832968 nonsynonymous SNV 0.979 4 22 hPsi_associated_SNPs_27743 0 0 1 0 2 Cytosol 0.438719291132884 0.438798798472101 0 0 hPsi_site_21467 iPseU_CNN:0;iRNA_PseU:0 21468 chr15 90616485 90616485 1 + C A HNSC 90616484 + 90616464 90616504 41 ACACTCGCCCGTGAAGCCATTCAAATGCAAGGTACCCGGTC ACACTCGCCCGTGAAGCCATTAAAATGCAAGGTACCCGGTC < 41bp 0.463359444932578 0.827456286805404 0.3448647 0.50390226 prediction 0.654912573610808 Functional Gain - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90616484 chr15:90616485 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27744 0 0 0 0 1 Endoplasmic reticulum 0.438714651894176 0.43872474491617 0.00780452000000009 0 hPsi_site_21468 iPseU_CNN:0.00780452000000009;iRNA_PseU:0 21469 chrX 69459684 69459684 1 + C A LUAD 69459683 + 69459663 69459703 41 GTACAAGTTCCAGAGCTGCTTCCGCCGTATCTTTGGTTTCT GTACAAGTTCCAGAGCTGCTTACGCCGTATCTTTGGTTTCT < 41bp 0.535211648353478 0.862665545461609 0.24620545 0.475605 prediction 0.654907794216261 Functional Gain - AWAT1 ENSG00000204195 CDS Human protein_coding chrX:69459683 chrX:69459684 nonsynonymous SNV 0.962 1 22 hPsi_associated_SNPs_27745 0 0 0 0 1 unknown 0.438731618351634 0.436626359807702 0 0 hPsi_site_21469 iPseU_CNN:0;iRNA_PseU:0 21470 chr15 29398908 29398908 1 + G A UCEC 29398907 + 29398887 29398927 41 GGTGATCCTGGCCAACATGATGAATGGCGGCCCGGCTGCCC GGTGATCCTGGCCAACATGATAAATGGCGGCCCGGCTGCCC < 41bp 0.411370992725008 0.827447959185522 0.29148078 0.76890266 prediction 0.654895918371045 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29398907 chr15:29398908 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_27746 0 0 1 0 1 Cytosol 0.438821869221031 0.441171138085428 0.53780532 0 hPsi_site_21470 iPseU_CNN:0.53780532;iRNA_PseU:0 21471 chr18 55021686 55021686 1 + C A UCEC 55021685 + 55021665 55021705 41 CATTCGTGCCCATTACGAATTCTCTCACCCAGGAACTCCAA CATTCGTGCCCATTACGAATTATCTCACCCAGGAACTCCAA < 41bp 0.538309321328834 0.865756653417452 0.33517516 0.54075724 prediction 0.654894664177237 Functional Gain - ST8SIA3 ENSG00000177511 CDS Human protein_coding chr18:55021685 chr18:55021686 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_27747 0 0 0 0 2 unknown 0.438718592994356 0.438718593000848 0.0815144800000001 0 hPsi_site_21471 iPseU_CNN:0.0815144800000001;iRNA_PseU:0 21472 chr5 5186252 5186252 1 + C A rs190796529 5186251 + 5186231 5186271 41 ATAAGCGCTCTCTTCTGAGGTCCCATAGAAATGAAGAACTG ATAAGCGCTCTCTTCTGAGGTACCATAGAAATGAAGAACTG < 41bp 0.45133013004503 0.827445984324327 0.20437166 0.3461068 prediction 0.654891968648655 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5186251 chr5:5186252 nonsynonymous SNV 0.934 1 22 hPsi_associated_SNPs_27748 0 0 0 0 1 exosome 0.438718843598581 0.438718572978228 0 0 hPsi_site_21472 iPseU_CNN:0;iRNA_PseU:0 21473 chr8 144681999 144681999 1 + G A UCEC 144681998 + 144681978 144682018 41 AGCAGGCCCCTATGACGGTGTGTGACCAGGCCAGCCCAGTG AGCAGGCCCCTATGACGGTGTATGACCAGGCCAGCCCAGTG < 41bp 0.548564117681361 0.876008330704862 0.2969649 0.6054945 prediction 0.654888426047002 Functional Gain - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144681998 chr8:144681999 synonymous SNV . 0 22 hPsi_associated_SNPs_27749 0 0 1 0 0 Ribosome 0.438718592993116 0.438718592994513 0.210989 0 hPsi_site_21473 iPseU_CNN:0.210989;iRNA_PseU:0 21474 chr19 48789575 48789575 1 + G A BLCA 48789574 + 48789554 48789594 41 CCATTTGGAAAAGCTTTCCGTGAAGACGGATCCCTTAGGGC CCATTTGGAAAAGCTTTCCGTAAAGACGGATCCCTTAGGGC < 41bp 0.414282399832719 0.827441412546805 0.32205278 0.7065821 prediction 0.65488282509361 Functional Gain - ZNF114 ENSG00000178150 CDS Human protein_coding chr19:48789574 chr19:48789575 nonsynonymous SNV 0.029 0 22 hPsi_associated_SNPs_27750 0 0 0 0 0 chromatin 0.438718592704958 0.438718727465368 0.4131642 0 hPsi_site_21474 iPseU_CNN:0.4131642;iRNA_PseU:0 21475 chr1 15894505 15894505 1 + G A BLCA 15894504 + 15894484 15894524 41 GAAGCCATAGGGTCGTGCAGTGATGTTGACTCTTCCCTCTA GAAGCCATAGGGTCGTGCAGTAATGTTGACTCTTCCCTCTA < 41bp 0.43608379245247 0.827438469023325 0.2680635 0.6226069 prediction 0.65487693804665 Functional Gain - DNAJC16 ENSG00000116138 CDS Human protein_coding chr1:15894504 chr1:15894505 nonsynonymous SNV 0.026 1 22 hPsi_associated_SNPs_27751 0 0 1 1 0 Endoplasmic reticulum 0.438718593035529 0.438731696043142 0.2452138 0 hPsi_site_21475 iPseU_CNN:0.2452138;iRNA_PseU:0 21476 chr5 140563113 140563113 1 + C A UCEC 140563112 + 140563092 140563132 41 AAAGCCACAGATGGGGGAGGTCTTTCAGGAAAGTGCACTCT AAAGCCACAGATGGGGGAGGTATTTCAGGAAAGTGCACTCT < 41bp 0.470450933719968 0.827435411622974 0.43460354 0.75625783 prediction 0.654870823245947 Functional Gain - PCDHB16 ENSG00000196963 CDS Human other chr5:140563112 chr5:140563113 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_27752 0 0 0 0 0 Nucleus 0.438718592995102 0.438718592995102 0.51251566 0 hPsi_site_21476 iPseU_CNN:0.51251566;iRNA_PseU:0 21477 chr4 39780661 39780661 1 + C A rs558251995 39780660 + 39780640 39780680 41 GACAGTGTCTGATTCCCCCTTCACCCCCCCCACCCCCGCCT GACAGTGTCTGATTCCCCCTTAACCCCCCCCACCCCCGCCT < 41bp 0.530624868714477 0.858056147803578 0.30438367 0.43761837 prediction 0.654862558178203 Functional Gain - UBE2K ENSG00000078140 UTR3 Human protein_coding chr4:39780660 chr4:39780661 . . 0 22 hPsi_associated_SNPs_27753 0 0 1 0 0 Cytosol 0.438718592995441 0.438718592996709 0 0 hPsi_site_21477 iPseU_CNN:0;iRNA_PseU:0 21478 chr1 167666545 167666545 1 + G A BLCA 167666544 + 167666524 167666564 41 GGGAGCAGCGGGAGAGGGAGTGAGAACCCTGGGACCTGCTG GGGAGCAGCGGGAGAGGGAGTAAGAACCCTGGGACCTGCTG < 41bp 0.406368729712743 0.827430671773699 0.34152818 0.47605672 prediction 0.654861343547398 Functional Gain - RCSD1 ENSG00000198771 CDS Human protein_coding chr1:167666544 chr1:167666545 synonymous SNV . 0 22 hPsi_associated_SNPs_27754 0 0 1 0 0 chromatin 0.438718592658856 0.438718592675911 0 0 hPsi_site_21478 iPseU_CNN:0;iRNA_PseU:0 21479 chr18 72998139 72998139 1 + G A rs148422389 72998138 + 72998118 72998158 41 TGCCGCGTACGACACGCTGGTGGAACTGACGGTGCACATGA TGCCGCGTACGACACGCTGGTAGAACTGACGGTGCACATGA < 41bp 0.419139674155309 0.827425573329132 0.24191153 0.7020055 prediction 0.654851146658263 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998138 chr18:72998139 synonymous SNV . 0 22 hPsi_associated_SNPs_27755 1 0 1 0 0 Cytosol 0.438720479648944 0.438545848758533 0.404011 0 hPsi_site_21479 iPseU_CNN:0.404011;iRNA_PseU:0 21480 chr2 74043234 74043234 1 + G A STAD 74043233 + 74043213 74043253 41 GCCCCGAAGCTCCCTAGGCATGCACATGCTAGAGTCCGTGC GCCCCGAAGCTCCCTAGGCATACACATGCTAGAGTCCGTGC < 41bp 0.412619558353771 0.827422646964287 0.31936195 0.73984486 prediction 0.654845293928575 Functional Gain - C2orf78 ENSG00000187833 CDS Human protein_coding chr2:74043233 chr2:74043234 nonsynonymous SNV 0.558 1 22 hPsi_associated_SNPs_27756 0 0 0 0 0 unknown 0.438718626425468 0.438717807066563 0.47968972 0 hPsi_site_21480 iPseU_CNN:0.47968972;iRNA_PseU:0 21481 chr12 54903641 54903641 1 + G A SKCM 54903640 + 54903620 54903660 41 TTTTCCCCACAGGCTGTGAGTGGAGCCCTCCTCTCTTTGCA TTTTCCCCACAGGCTGTGAGTAGAGCCCTCCTCTCTTTGCA < 41bp 0.443278926789477 0.82742196474422 0.3332346 0.32038832 prediction 0.65484392948844 Functional Gain - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54903640 chr12:54903641 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_27757 0 0 0 0 1 Cytosol 0.4387186419222 0.438718599190907 0 0 hPsi_site_21481 iPseU_CNN:0;iRNA_PseU:0 21482 chr5 140532181 140532181 1 + G A SKCM 140532180 + 140532160 140532200 41 TCAGGGCACTGAGAGAGAAATGGAAGAAACCCCCACCTCTC TCAGGGCACTGAGAGAGAAATAGAAGAAACCCCCACCTCTC < 41bp 0.440718765315438 0.827421924750938 0.27542514 0.5897214 prediction 0.654843849501875 Functional Gain - PCDHB6 ENSG00000113211 CDS Human protein_coding chr5:140532180 chr5:140532181 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27758 0 0 0 0 0 exosome 0.438718200132704 0.438240239579417 0.1794428 0 hPsi_site_21482 iPseU_CNN:0.1794428;iRNA_PseU:0 21483 chr13 73636392 73636392 1 + C A rs115503899 73636391 + 73636371 73636411 41 CTTCCTACACCAGATCTTCATCTTTCTGTCCCTACCCAGCA CTTCCTACACCAGATCTTCATATTTCTGTCCCTACCCAGCA < 41bp 0.460652923168832 0.827410477379814 0.39386415 0.6258229 prediction 0.654820954759628 Functional Gain - KLF5 ENSG00000102554 CDS Human protein_coding chr13:73636391 chr13:73636392 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27759 0 0 1 0 0 Cytosol 0.438718633260102 0.438718608003964 0.2516458 0 hPsi_site_21483 iPseU_CNN:0.2516458;iRNA_PseU:0 21484 chr13 73327930 73327930 1 + G A HNSC 73327929 + 73327909 73327949 41 GATGCACAAACATGTGAAGTTGAGAGTAAATCTCAAGCATT GATGCACAAACATGTGAAGTTAAGAGTAAATCTCAAGCATT < 41bp 0.432407131952293 0.827410156501762 0.18146098 0.61762947 prediction 0.654820313003523 Functional Gain - BORA ENSG00000136122 CDS Human protein_coding chr13:73327929 chr13:73327930 nonsynonymous SNV 0.022 1 22 hPsi_associated_SNPs_27760 0 0 0 0 1 Cytosol 0.434971437272382 0.438436164677755 0.23525894 0 hPsi_site_21484 iPseU_CNN:0.23525894;iRNA_PseU:0 21485 chr4 119554360 119554360 1 + G A CESC 119554359 + 119554339 119554379 41 CCTGTCTCACACTGGCCTGTTGAGGGCCAGCTCATGCCTCT CCTGTCTCACACTGGCCTGTTAAGGGCCAGCTCATGCCTCT < 41bp 0.539981556161512 0.867388010231091 0.3356147 0.75660694 prediction 0.654812908139157 Functional Gain - LOC729218 ENSG00000225892;ENSG00000260404 ncRNA_exonic Human other chr4:119554359 chr4:119554360 . . 0 22 hPsi_associated_SNPs_27761 0 0 1 0 0 unknown 0.437455060472635 0.452196113406234 0.51321388 0 hPsi_site_21485 iPseU_CNN:0.51321388;iRNA_PseU:0 21486 chr10 101122004 101122004 1 + C A UCEC 101122003 + 101121983 101122023 41 GAAGTGGAGCCCTTTAAGTCTCTGTACCTTTCGGAGAAGAT GAAGTGGAGCCCTTTAAGTCTATGTACCTTTCGGAGAAGAT < 41bp 0.457421565355264 0.827404358217044 0.34944195 0.35670838 prediction 0.654808716434088 Functional Gain - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101122003 chr10:101122004 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27762 0 0 1 0 1 cytosol 0.438718762699446 0.438718497090962 0 0 hPsi_site_21486 iPseU_CNN:0;iRNA_PseU:0 21487 chr17 18923082 18923082 1 + G A SKCM 18923081 + 18923061 18923101 41 GGGGGCCACGAGGCTGGTCCTGGAATTCCTGAACCCAGCCC GGGGGCCACGAGGCTGGTCCTAGAATTCCTGAACCCAGCCC < 41bp 0.411179778875694 0.827403376533811 0.19588143 0.34814072 prediction 0.654806753067622 Functional Gain - SLC5A10 ENSG00000154025 CDS Human protein_coding chr17:18923081 chr17:18923082 synonymous SNV . 0 22 hPsi_associated_SNPs_27763 0 0 0 0 1 chromatin 0.438718592995102 0.438717413814018 0 0 hPsi_site_21487 iPseU_CNN:0;iRNA_PseU:0 21488 chr20 2635525 2635525 1 + G A CESC 2635524 + 2635504 2635544 41 TGTGAACCGGGTGGACAATATGATCATCCAGTCCATTAGCC TGTGAACCGGGTGGACAATATAATCATCCAGTCCATTAGCC < 41bp 0.423359017040148 0.827400030205458 0.28538468 0.7040322 prediction 0.654800060410916 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635524 chr20:2635525 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27764 0 0 1 0 1 Cytosol 0.438718592995103 0.438718592995102 0.4080644 0 hPsi_site_21488 iPseU_CNN:0.4080644;iRNA_PseU:0 21489 chr18 4294649 4294649 1 + G A rs62088064 4294648 + 4294628 4294668 41 ACAGTGTGCTCTTCTAGTGTTGCTGTCCAAGTGTTAACTAG ACAGTGTGCTCTTCTAGTGTTACTGTCCAAGTGTTAACTAG < 41bp 0.46281729566594 0.827399755971524 0.27836895 0.33462748 prediction 0.654799511943049 Functional Gain - DLGAP1-AS5 ENSG00000261520 ncRNA_exonic Human antisense chr18:4294648 chr18:4294649 . . 0 22 hPsi_associated_SNPs_27765 0 0 0 0 0 unknown 0.438713475238826 0.438717725985781 0 0 hPsi_site_21489 iPseU_CNN:0;iRNA_PseU:0 21490 chr22 46742369 46742369 1 + G A HNSC 46742368 + 46742348 46742388 41 GCAAGAACTTCCCTGGAAGATGAAGAAGTCTTTGAGCAGAA GCAAGAACTTCCCTGGAAGATAAAGAAGTCTTTGAGCAGAA < 41bp 0.575217441346103 0.902613736142063 0.18693945 0.30038634 prediction 0.65479258959192 Functional Gain - TRMU ENSG00000100416 CDS Human protein_coding chr22:46742368 chr22:46742369 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_27766 0 0 1 0 2 Ribosome 0.438718539033394 0.438718574946857 0 0 hPsi_site_21490 iPseU_CNN:0;iRNA_PseU:0 21491 chr22 35804466 35804466 1 + G A STAD 35804465 + 35804445 35804485 41 TCATGCCCGACAAATGCAAATGCGTGGACTTCCAGACCCTG TCATGCCCGACAAATGCAAATACGTGGACTTCCAGACCCTG < 41bp 0.428497879138406 0.827394210849421 0.31040457 0.6945771 prediction 0.654788421698841 Functional Gain - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35804465 chr22:35804466 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_27767 0 0 1 0 1 Cytosol 0.438715224654687 0.438719499171655 0.3891542 0 hPsi_site_21491 iPseU_CNN:0.3891542;iRNA_PseU:0 21492 chr10 51827726 51827726 1 + G A rs114923840 51827725 + 51827705 51827745 41 GGGCTCTGCAGTCCTCGGCGTGTGCTGGCAGCTTCGGAGCC GGGCTCTGCAGTCCTCGGCGTATGCTGGCAGCTTCGGAGCC < 41bp 0.504801189941773 0.832193638981888 0.31382006 0.7086681 prediction 0.65478489808023 Functional Gain - WASHC2A ENSG00000099290 UTR5 Human protein_coding chr10:51827725 chr10:51827726 . . 0 22 hPsi_associated_SNPs_27768 0 0 1 0 1 unknown 0.438667251956832 0.43869098891203 0.4173362 0 hPsi_site_21492 iPseU_CNN:0.4173362;iRNA_PseU:0 21493 chr8 110569202 110569202 1 + C A TGCT 110569201 + 110569181 110569221 41 AGAACCATTGAATTTTGGCATCCCAGATGGGAGCACAGGTT AGAACCATTGAATTTTGGCATACCAGATGGGAGCACAGGTT < 41bp 0.533006020327829 0.860394195531901 0.2451466 0.32214692 prediction 0.654776350408144 Functional Gain - EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110569201 chr8:110569202 synonymous SNV . 0 22 hPsi_associated_SNPs_27769 0 0 1 0 2 Ribosome 0.438718587683183 0.438718592995102 0 0 hPsi_site_21493 iPseU_CNN:0;iRNA_PseU:0 21494 chr19 55179368 55179368 1 + G A rs79606733 55179367 + 55179347 55179387 41 GGATGTGACCTACGCCCAGCTGCACAGCTTTACCCTCAGAC GGATGTGACCTACGCCCAGCTACACAGCTTTACCCTCAGAC < 41bp 0.567944126545125 0.895319796224886 0.25268462 0.5451573 prediction 0.65475133935952 Functional Gain - LILRB4 ENSG00000186818 CDS Human protein_coding chr19:55179367 chr19:55179368 synonymous SNV . 0 22 hPsi_associated_SNPs_27770 0 0 0 0 1 exosome 0.438737530799732 0.438833384498925 0.0903145999999999 0 hPsi_site_21494 iPseU_CNN:0.0903145999999999;iRNA_PseU:0 21495 chrX 149680923 149680923 1 + G A rs782122059 149680922 + 149680902 149680942 41 GAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACACCACCA GAGCCCGGTACAGGGCCCGGTACCTGTAGCAAACACCACCA < 41bp 0.574003851189811 0.901376471939565 0.11025575 0.8073516 prediction 0.654745241499509 Functional Gain - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149680922 chrX:149680923 synonymous SNV . 0 22 hPsi_associated_SNPs_27771 0 0 0 0 0 Nucleus 0.438722156170338 0.444598536375521 0.6147032 0 hPsi_site_21495 iPseU_CNN:0.6147032;iRNA_PseU:0 21496 chr1 151239889 151239889 1 + G A rs147117956 151239888 + 151239868 151239908 41 GCACGGAATATAGGGTTAGATGTGTGTTATCTGTAACCATT GCACGGAATATAGGGTTAGATATGTGTTATCTGTAACCATT < 41bp 0.472779604001474 0.827370597020953 0.2616023 0.42237705 prediction 0.654741194041907 Functional Gain - PSMD4 ENSG00000159352 UTR3 Human protein_coding chr1:151239888 chr1:151239889 . . 0 22 hPsi_associated_SNPs_27772 0 0 1 0 0 Ribosome 0.438728242102617 0.438775607148924 0 0 hPsi_site_21496 iPseU_CNN:0;iRNA_PseU:0 21497 chr1 24082369 24082369 1 + C A UCEC 24082368 + 24082348 24082388 41 ACAGATCAATTATGGAAAGTTCATTGTCACCGAGACTTTAA ACAGATCAATTATGGAAAGTTAATTGTCACCGAGACTTTAA < 41bp 0.472986485758063 0.827369898355353 0.36491504 0.8978557 prediction 0.654739796710706 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24082368 chr1:24082369 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_27773 0 0 1 0 1 unknown 0.438724086714258 0.438718817707392 0.7957114 0 hPsi_site_21497 iPseU_CNN:0.7957114;iRNA_PseU:0 21498 chr18 580544 580544 1 + G A SKCM 580543 + 580523 580563 41 CTCTTCGACGTGGACGGAAGTGGGACCATCGACGCGAAGGA CTCTTCGACGTGGACGGAAGTAGGACCATCGACGCGAAGGA < 41bp 0.567719201660945 0.895088201346438 0.30569005 0.35783055 prediction 0.654737999370986 Functional Gain - CETN1 ENSG00000177143 CDS Human protein_coding chr18:580543 chr18:580544 nonsynonymous SNV 0.797 4 22 hPsi_associated_SNPs_27774 0 0 0 0 0 unknown 0.438437935163962 0.438671409371351 0 0 hPsi_site_21498 iPseU_CNN:0;iRNA_PseU:0 21499 chr10 17275663 17275663 1 + G A UCEC 17275662 + 17275642 17275682 41 GCAAGAAGAGATTGCCTTTTTGAAGAAACTCCACGAAGAGG GCAAGAAGAGATTGCCTTTTTAAAGAAACTCCACGAAGAGG < 41bp 0.415209462230616 0.827365465559824 0.18918055 0.2822702 prediction 0.654730931119648 Functional Gain - VIM ENSG00000026025 CDS Human protein_coding chr10:17275662 chr10:17275663 synonymous SNV . 0 22 hPsi_associated_SNPs_27775 0 0 1 1 2 Ribosome 0.438722494545836 0.438718396205215 0 0 hPsi_site_21499 iPseU_CNN:0;iRNA_PseU:0 21500 chr15 40861653 40861653 1 + G A UCEC 40861652 + 40861632 40861672 41 GGGCCCAATGGCAGAAACAGTGTCTACCCAGGTTGGGACAG GGGCCCAATGGCAGAAACAGTATCTACCCAGGTTGGGACAG < 41bp 0.561232767086848 0.888594214469546 0.273826 0.3921474 prediction 0.654722894765397 Functional Gain - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40861652 chr15:40861653 synonymous SNV . 0 22 hPsi_associated_SNPs_27776 0 0 1 0 0 Cytosol 0.438718380980898 0.438718592958128 0 0 hPsi_site_21500 iPseU_CNN:0;iRNA_PseU:0 21501 chr7 154876179 154876179 1 + C A UCEC 154876178 + 154876158 154876198 41 CAACAGCGCCTTCAAGAACTTCTTTTCTAGGCAACACTGAG CAACAGCGCCTTCAAGAACTTATTTTCTAGGCAACACTGAG < 41bp 0.515340175711731 0.842697472107592 0.19992113 0.27224284 prediction 0.654714592791721 Functional Gain - HTR5A ENSG00000157219 CDS Human protein_coding chr7:154876178 chr7:154876179 nonsynonymous SNV 0.721 1 22 hPsi_associated_SNPs_27777 0 0 0 0 0 exosome 0.438713751178207 0.438711494432289 0 0 hPsi_site_21501 iPseU_CNN:0;iRNA_PseU:0 21502 chr1 165513779 165513779 1 + G A rs115653001 165513778 + 165513758 165513798 41 CCTCAGTGACCTTGTTTATTTGGACTGTCAGAACAACCGGA CCTCAGTGACCTTGTTTATTTAGACTGTCAGAACAACCGGA < 41bp 0.553334389195012 0.880690574164716 0.28173602 0.28841692 prediction 0.654712369939409 Functional Gain - LRRC52 ENSG00000162763 CDS Human protein_coding chr1:165513778 chr1:165513779 synonymous SNV . 0 22 hPsi_associated_SNPs_27778 0 0 0 0 0 unknown 0.437911835328127 0.4374554999018 0 0 hPsi_site_21502 iPseU_CNN:0;iRNA_PseU:0 21503 chr21 37583920 37583920 1 + C A UCEC 37583919 + 37583899 37583939 41 AGAAATAATCTGGAAATCGTTCTGTTTTTCTTCCCATTTTA AGAAATAATCTGGAAATCGTTATGTTTTTCTTCCCATTTTA < 41bp 0.519409856481816 0.846763164245304 0.3632465 0.43917024 prediction 0.654706615526977 Functional Gain - DOPEY2 ENSG00000142197 CDS Human protein_coding chr21:37583919 chr21:37583920 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27779 0 0 0 0 2 cytosol 0.439219509385073 0.43871909681711 0 0 hPsi_site_21503 iPseU_CNN:0;iRNA_PseU:0 21504 chr4 17585131 17585131 1 + G A BRCA 17585130 + 17585110 17585150 41 GTGCAGGCAGATTCAAGACCTGGAGCTCTCGTCTGTGGAGG GTGCAGGCAGATTCAAGACCTAGAGCTCTCGTCTGTGGAGG < 41bp 0.407756898217016 0.827353116267518 0.2584023 0.3134829 prediction 0.654706232535035 Functional Gain - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17585130 chr4:17585131 synonymous SNV . 0 22 hPsi_associated_SNPs_27780 0 0 1 0 1 Ribosome 0.438718592995102 0.438717501104832 0 0 hPsi_site_21504 iPseU_CNN:0;iRNA_PseU:0 21505 chr1 229790029 229790029 1 + G A OV 229790028 + 229790008 229790048 41 ACCTGCCTACGGTCCTAAAGTGTGCACGCCTGGTTGAAAGA ACCTGCCTACGGTCCTAAAGTATGCACGCCTGGTTGAAAGA < 41bp 0.574432157059167 0.901785242481452 0.19473544 0.23723522 prediction 0.654706170844569 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229790028 chr1:229790029 nonsynonymous SNV 0.034 1 22 hPsi_associated_SNPs_27781 0 0 1 0 1 Nucleus 0.438718540480528 0.43871853551503 0 0 hPsi_site_21505 iPseU_CNN:0;iRNA_PseU:0 21506 chr9 6506093 6506093 1 + C A UCEC 6506092 + 6506072 6506112 41 TGCCCTGCTTGCCGGCATGATCTTGGCCAGAATTACATCAT TGCCCTGCTTGCCGGCATGATATTGGCCAGAATTACATCAT < 41bp 0.522198859588686 0.849551665435591 0.3302026 0.6209115 prediction 0.654705611693809 Functional Gain - UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6506092 chr9:6506093 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27782 0 0 0 0 1 Nucleus 0.438074798049675 0.43268682232455 0.241823 0 hPsi_site_21506 iPseU_CNN:0.241823;iRNA_PseU:0 21507 chr5 141313933 141313933 1 + G A BLCA 141313932 + 141313912 141313952 41 GCAGAGGGCAGTGTCCTTGCTGAAGCAGGCTGCAGACTCAG GCAGAGGGCAGTGTCCTTGCTAAAGCAGGCTGCAGACTCAG < 41bp 0.403593866201125 0.827339930920553 0.18046585 0.5470009 prediction 0.654679861841106 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141313932 chr5:141313933 synonymous SNV . 0 22 hPsi_associated_SNPs_27783 0 0 1 0 1 Ribosome 0.438718882591352 0.438718670781257 0.0940018 0 hPsi_site_21507 iPseU_CNN:0.0940018;iRNA_PseU:0 21508 chr3 110831136 110831136 1 + C A GBM 110831135 + 110831115 110831155 41 TACTCTGCATAACATAGGATTCTCTGATTCTGGAAAATACA TACTCTGCATAACATAGGATTATCTGATTCTGGAAAATACA < 41bp 0.484460070153581 0.827337477652389 0.29910403 0.30003542 prediction 0.654674955304779 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110831135 chr3:110831136 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27784 0 0 0 0 1 Ribosome 0.438722961300986 0.438718593660027 0 0 hPsi_site_21508 iPseU_CNN:0;iRNA_PseU:0 21509 chr19 758448 758448 1 + G A SKCM 758447 + 758427 758467 41 CCAACAGGGGTGTCGTGCGGTGGGAGTACTTCCGCCTGCGT CCAACAGGGGTGTCGTGCGGTAGGAGTACTTCCGCCTGCGT < 41bp 0.43540068140868 0.827335941574427 0.50277 0.87262666 prediction 0.654671883148855 Functional Gain - MISP ENSG00000099812 CDS Human protein_coding chr19:758447 chr19:758448 stopgain 0.001 0 22 hPsi_associated_SNPs_27785 0 0 0 0 0 nucleus 0.438718595669127 0.438718592308058 0.73971332 0 hPsi_site_21509 iPseU_CNN:0.73971332;iRNA_PseU:0 21510 chr19 10131464 10131464 1 + G A LIHC 10131463 + 10131443 10131483 41 AAGCCTCGCTATCCAGCTGCTGCAGTTCAACATCTTGTGAG AAGCCTCGCTATCCAGCTGCTACAGTTCAACATCTTGTGAG < 41bp 0.410754403319133 0.827329090747882 0.31515747 0.49291363 prediction 0.654658181495764 Functional Gain - RDH8 ENSG00000080511 CDS Human protein_coding chr19:10131463 chr19:10131464 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_27786 0 0 0 0 2 unknown 0.439052988418752 0.43898396797953 0 0 hPsi_site_21510 iPseU_CNN:0;iRNA_PseU:0 21511 chr15 39875844 39875844 1 + C A GBM 39875843 + 39875823 39875863 41 GCTGCAGAATGTGAGGTTTGTCTTTGGAACCACACCAGAAG GCTGCAGAATGTGAGGTTTGTATTTGGAACCACACCAGAAG < 41bp 0.452552723606576 0.827328263696266 0.35050094 0.7488736 prediction 0.654656527392532 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39875843 chr15:39875844 synonymous SNV . 0 22 hPsi_associated_SNPs_27787 0 0 1 0 2 cytosol 0.438716308314989 0.438717601518829 0.4977472 0 hPsi_site_21511 iPseU_CNN:0.4977472;iRNA_PseU:0 21512 chr19 50925764 50925764 1 + G A UCEC 50925763 + 50925743 50925783 41 TCTTCTATGACCTGGACAGCTGCAAGCATTCCAGCTACCCT TCTTCTATGACCTGGACAGCTACAAGCATTCCAGCTACCCT < 41bp 0.407379115038475 0.827325489002685 0.3338171 0.7731651 prediction 0.65465097800537 Functional Gain - SPIB ENSG00000142539;ENSG00000269404 CDS Human other chr19:50925763 chr19:50925764 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_27788 0 0 0 0 2 Endoplasmic reticulum 0.438594523083786 0.438632588020387 0.5463302 0 hPsi_site_21512 iPseU_CNN:0.5463302;iRNA_PseU:0 21513 chr3 38357103 38357103 1 + C A UCEC 38357102 + 38357082 38357122 41 GTCCGGCCACAGAGCTGAAATCCATGACGATCTTGGTGCTC GTCCGGCCACAGAGCTGAAATACATGACGATCTTGGTGCTC < 41bp 0.464172871551276 0.827323071820822 0.58708656 0.6982724 prediction 0.654646143641645 Functional Gain - SLC22A14 ENSG00000144671 CDS Human protein_coding chr3:38357102 chr3:38357103 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_27789 0 0 0 4 2 exosome 0.438718604228076 0.438719145281748 0.22237168 0 hPsi_site_21513 iPseU_CNN:0.22237168;iRNA_PseU:0 21514 chr8 67341837 67341837 1 + G A HNSC 67341836 + 67341816 67341856 41 GGACGACACCAAAGAATGGCTGATTGAGGTGCCCGGCAATG GGACGACACCAAAGAATGGCTAATTGAGGTGCCCGGCAATG < 41bp 0.564590210474594 0.891912105022964 0.326396 0.64617866 prediction 0.65464378909674 Functional Gain - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341836 chr8:67341837 synonymous SNV . 0 22 hPsi_associated_SNPs_27790 0 0 0 0 0 exosome 0.438807121215564 0.438718592995244 0.29235732 0 hPsi_site_21514 iPseU_CNN:0.29235732;iRNA_PseU:0 21515 chr6 43040600 43040600 1 + G T LIHC 43040599 + 43040579 43040619 41 CCAGACGAAGGTGGCAGAGCTGCTTGGGGAGAGTGATGGTA CCAGACGAAGGTGGCAGAGCTTCTTGGGGAGAGTGATGGTA < 41bp 0.504145515619554 0.831465658250858 0.33293784 0.7003054 prediction 0.654640285262608 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43040599 chr6:43040600 synonymous SNV . 0 22 hPsi_associated_SNPs_27791 0 0 1 0 1 Cytosol 0.438742452811121 0.438718593289991 0.4006108 0 hPsi_site_21515 iPseU_CNN:0.4006108;iRNA_PseU:0 21516 chr4 123664737 123664737 1 + G A UCEC 123664736 + 123664716 123664756 41 TCTCTGAAAAAAGAAAACCATGCCTGCTCAGGGTGGCTGCA TCTCTGAAAAAAGAAAACCATACCTGCTCAGGGTGGCTGCA < 41bp 0.431270524432362 0.827315490814737 0.22542942 0.40806714 prediction 0.654630981629474 Functional Gain - BBS12 ENSG00000181004 CDS Human protein_coding chr4:123664736 chr4:123664737 nonsynonymous SNV 0.424 0 22 hPsi_associated_SNPs_27792 0 0 0 0 0 Cytosol 0.438857251077123 0.438899366547093 0 0 hPsi_site_21516 iPseU_CNN:0;iRNA_PseU:0 21517 chr8 128429093 128429093 1 + C A CESC 128429092 + 128429072 128429112 41 ACCCCAGGCTATGGGAGCCCTCACTTCACTGCACTGTACTC ACCCCAGGCTATGGGAGCCCTAACTTCACTGCACTGTACTC < 41bp 0.482877803567091 0.827315310571992 0.21946582 0.3870366 prediction 0.654630621143983 Functional Gain - POU5F1B ENSG00000212993 CDS Human protein_coding chr8:128429092 chr8:128429093 nonsynonymous SNV 0.803 2 22 hPsi_associated_SNPs_27793 0 0 0 0 0 exosome 0.421291703334421 0.438711164552817 0 0 hPsi_site_21517 iPseU_CNN:0;iRNA_PseU:0 21518 chr10 50820184 50820184 1 + G A STAD 50820183 + 50820163 50820203 41 CCTGCTCTATGCTCCCGTCTTGCTGCTGCTCCGCAACGTGG CCTGCTCTATGCTCCCGTCTTACTGCTGCTCCGCAACGTGG < 41bp 0.554268746436604 0.881582611228225 0.28760505 0.6030112 prediction 0.654627729583241 Functional Gain - SLC18A3 ENSG00000187714 CDS Human protein_coding chr10:50820183 chr10:50820184 synonymous SNV . 0 22 hPsi_associated_SNPs_27794 0 0 0 0 0 exosome 0.43857197504688 0.437659594932956 0.2060224 0 hPsi_site_21518 iPseU_CNN:0.2060224;iRNA_PseU:0 21519 chr17 33288971 33288971 1 + C A UCEC 33288970 + 33288950 33288990 41 CTCAGGTACAGCCCTCCACATCTGCGTGGACCACCAACTTT CTCAGGTACAGCCCTCCACATATGCGTGGACCACCAACTTT < 41bp 0.528913484584764 0.856225860373933 0.2019518 0.24363962 prediction 0.654624751578338 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33288970 chr17:33288971 nonsynonymous SNV 0.526 2 22 hPsi_associated_SNPs_27795 0 0 1 0 0 Cytosol 0.438718380461844 0.43886602325283 0 0 hPsi_site_21519 iPseU_CNN:0;iRNA_PseU:0 21520 chr1 248616344 248616344 1 + G A KIRC 248616343 + 248616323 248616363 41 CTGTATCACTGTCCCCAAGATGCTCCAGGACCTCCTGTCCA CTGTATCACTGTCCCCAAGATACTCCAGGACCTCCTGTCCA < 41bp 0.546643283589834 0.87395483483324 0.19765696 0.66215205 prediction 0.654623102486813 Functional Gain - OR2T2 ENSG00000196240 CDS Human protein_coding chr1:248616343 chr1:248616344 nonsynonymous SNV 0.855 1 22 hPsi_associated_SNPs_27796 0 0 0 0 0 exosome 0.438860070041889 0.438746148159972 0.3243041 0 hPsi_site_21520 iPseU_CNN:0.3243041;iRNA_PseU:0 21521 chr12 6882045 6882045 1 + G A STAD 6882044 + 6882024 6882064 41 GGAGGCTCAGTTCCTGGGCTTGCTGTTTCTGCAGCCGCTTT GGAGGCTCAGTTCCTGGGCTTACTGTTTCTGCAGCCGCTTT < 41bp 0.558549556583338 0.885858438950918 0.37375987 0.6146862 prediction 0.654617764735159 Functional Gain - LAG3 ENSG00000089692 CDS Human protein_coding chr12:6882044 chr12:6882045 synonymous SNV . 0 22 hPsi_associated_SNPs_27797 0 0 0 0 1 exosome 0.438786244650688 0.439101726274182 0.2293724 0 hPsi_site_21521 iPseU_CNN:0.2293724;iRNA_PseU:0 21522 chr9 90344640 90344640 1 + C A UCEC 90344639 + 90344619 90344659 41 AGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGTAAGCATA AGGTCATGAGTCCTTCCTGTTATATAAAGAAGGTAAGCATA < 41bp 0.52700999256656 0.85431750980775 0.30393052 0.4195213 prediction 0.654615034482379 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90344639 chr9:90344640 nonsynonymous SNV 0.186 1 22 hPsi_associated_SNPs_27798 0 0 1 0 1 Ribosome 0.438718592741723 0.438718596501104 0 0 hPsi_site_21522 iPseU_CNN:0;iRNA_PseU:0 21523 chr6 87725478 87725478 1 + G A SKCM 87725477 + 87725457 87725497 41 GGCCAAGAGGGCCGCGCTGATGATCCTTACCGTCTGGACCA GGCCAAGAGGGCCGCGCTGATAATCCTTACCGTCTGGACCA < 41bp 0.411136711984759 0.827305475589193 0.11510602 0.36419272 prediction 0.654610951178387 Functional Gain - HTR1E ENSG00000168830 CDS Human protein_coding chr6:87725477 chr6:87725478 nonsynonymous SNV 0.799 2 22 hPsi_associated_SNPs_27799 0 0 0 0 0 unknown 0.438718592810483 0.438718592936666 0 0 hPsi_site_21523 iPseU_CNN:0;iRNA_PseU:0 21524 chr1 1376256 1376256 1 + G A rs530613121 1376255 + 1376235 1376275 41 CCGGGGAGAGGAGGTGGAGCTGTCCCCTCCCAGTGTCAGGC CCGGGGAGAGGAGGTGGAGCTATCCCCTCCCAGTGTCAGGC < 41bp 0.557078453110233 0.884383164797373 0.3392197 0.67370474 prediction 0.65460942337428 Functional Gain - VWA1 ENSG00000179403 UTR3 Human protein_coding chr1:1376255 chr1:1376256 . . 0 22 hPsi_associated_SNPs_27800 0 0 0 0 0 Ribosome 0.438718549833118 0.438718587968518 0.34740948 0 hPsi_site_21524 iPseU_CNN:0.34740948;iRNA_PseU:0 21525 chr20 35240424 35240424 1 + C A UCEC 35240423 + 35240403 35240443 41 TCCTCACTAGGTCATTTGGATCATCTTTTACACTGCCATCC TCCTCACTAGGTCATTTGGATAATCTTTTACACTGCCATCC < 41bp 0.519917173956212 0.847220730378294 0.36467615 0.63301575 prediction 0.654607112844164 Functional Gain - C20orf24;TGIF2-C20orf24 ENSG00000101084;ENSG00000259399 CDS Human other chr20:35240423 chr20:35240424 stopgain 1.000 0 22 hPsi_associated_SNPs_27801 0 0 1 8 1 unknown 0.438679057588061 0.438718125622834 0.2660315 0 hPsi_site_21525 iPseU_CNN:0.2660315;iRNA_PseU:0 21526 chr3 63638424 63638424 1 + C A rs565513339 63638423 + 63638403 63638443 41 CACTTGGAAGGAGATCCCAATCCTTCTGCAGCCCCAACATC CACTTGGAAGGAGATCCCAATACTTCTGCAGCCCCAACATC < 41bp 0.481633290715915 0.827301817341056 0.3034064 0.42302966 prediction 0.654603634682112 Functional Gain - SNTN ENSG00000188817 CDS Human protein_coding chr3:63638423 chr3:63638424 nonsynonymous SNV 0.044 0 22 hPsi_associated_SNPs_27802 0 0 0 0 1 unknown 0.438718576993634 0.438718592254607 0 0 hPsi_site_21526 iPseU_CNN:0;iRNA_PseU:0 21527 chr12 4920105 4920105 1 + G A UCEC 4920104 + 4920084 4920124 41 CGGAACATCATGAACATCATTGACTTGGTGGCTATCTTCCC CGGAACATCATGAACATCATTAACTTGGTGGCTATCTTCCC < 41bp 0.416581022927191 0.82729943304114 0.44097155 0.6570531 prediction 0.65459886608228 Functional Gain - KCNA6 ENSG00000151079 CDS Human protein_coding chr12:4920104 chr12:4920105 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_27803 0 0 0 0 0 exosome 0.438847834828175 0.438719972654497 0.3141062 0 hPsi_site_21527 iPseU_CNN:0.3141062;iRNA_PseU:0 21528 chr12 123463464 123463464 1 + G A SKCM 123463463 + 123463443 123463483 41 ACCGGGCCAGGACCTGGAGCTGGGCTGCCACTATGATAATG ACCGGGCCAGGACCTGGAGCTAGGCTGCCACTATGATAATG < 41bp 0.572193141154646 0.899491745151191 0.20093447 0.39743423 prediction 0.654597207993091 Functional Gain - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463463 chr12:123463464 synonymous SNV . 0 22 hPsi_associated_SNPs_27804 0 0 1 0 1 Cytosol 0.438717933078646 0.438717887300862 0 0 hPsi_site_21528 iPseU_CNN:0;iRNA_PseU:0 21529 chr3 141535812 141535812 1 + G A CESC 141535811 + 141535791 141535831 41 ATTATAGAAACGGGACTGTTTGAGGAACTGAATGACCCCAA ATTATAGAAACGGGACTGTTTAAGGAACTGAATGACCCCAA < 41bp 0.429424960536938 0.827297643137818 0.29610515 0.56172115 prediction 0.654595286275635 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141535811 chr3:141535812 nonsynonymous SNV 0.885 1 22 hPsi_associated_SNPs_27805 0 0 0 0 0 exosome 0.438718595205123 0.438723672721495 0.1234423 0 hPsi_site_21529 iPseU_CNN:0.1234423;iRNA_PseU:0 21530 chr5 134032891 134032891 1 + G A UCEC 134032890 + 134032870 134032910 41 TCTGGTCAGCAAGTTGCTGTTGACTTATTCCTTCTCAGTGG TCTGGTCAGCAAGTTGCTGTTAACTTATTCCTTCTCAGTGG < 41bp 0.422613682994753 0.82729687214012 0.2721975 0.59880435 prediction 0.65459374428024 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134032890 chr5:134032891 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27806 0 0 1 0 2 Ribosome 0.438589070625187 0.43871460648372 0.1976087 0 hPsi_site_21530 iPseU_CNN:0.1976087;iRNA_PseU:0 21531 chr1 160388969 160388969 1 + C A HNSC 160388968 + 160388948 160388988 41 CTGCTGTCTTTCCTCACGCCTCTGGCCTTCCTGCTGCTGCC CTGCTGTCTTTCCTCACGCCTATGGCCTTCCTGCTGCTGCC < 41bp 0.539303925219448 0.866595838220025 0.25845397 0.375215 prediction 0.654583826001153 Functional Gain - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160388968 chr1:160388969 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_27807 0 0 1 0 0 exosome 0.438718605540464 0.437586649373441 0 0 hPsi_site_21531 iPseU_CNN:0;iRNA_PseU:0 21532 chr15 68987511 68987511 1 + C A UCEC 68987510 + 68987490 68987530 41 TGAACCCAACTACCCCAAGGTCTGCGGCCACCAGGGCAATG TGAACCCAACTACCCCAAGGTATGCGGCCACCAGGGCAATG < 41bp 0.529300983361747 0.856591905039016 0.2981689 0.7164278 prediction 0.654581843354538 Functional Gain - CORO2B ENSG00000103647 CDS Human protein_coding chr15:68987510 chr15:68987511 synonymous SNV . 0 22 hPsi_associated_SNPs_27808 0 0 0 0 2 exosome 0.438718593428469 0.438716036703245 0.4328556 0 hPsi_site_21532 iPseU_CNN:0.4328556;iRNA_PseU:0 21533 chr4 2632794 2632794 1 + G T COAD 2632793 + 2632773 2632813 41 GGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGC GGTGAAGGCACCATCTGGCCTTCAGGGCCCGCCGCAAGCGC < 41bp 0.495768022283885 0.82728539306528 0.26850533 0.3884958 prediction 0.654570786130559 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2632793 chr4:2632794 synonymous SNV . 0 22 hPsi_associated_SNPs_27809 0 0 1 0 0 Cytosol 0.438718674086526 0.438719053902706 0 0 hPsi_site_21533 iPseU_CNN:0;iRNA_PseU:0 21534 chr6 83877668 83877668 1 + G T SKCM 83877669 - 83877649 83877689 41 TGAAGAACGGCAGGAGCTGCTCCATACTGCGCACGGTGCAG TGAAGAACGGCAGGAGCTGCTACATACTGCGCACGGTGCAG < 41bp 0.522172728395598 0.849456213427079 0.2149421 0.34415483 prediction 0.654566970062963 Functional Gain - DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83877669 chr6:83877668 stopgain 0.860 1 22 hPsi_associated_SNPs_27810 0 0 1 0 0 Cytosol 0.438718473777212 0.438647881025735 0 0 hPsi_site_21534 iPseU_CNN:0;iRNA_PseU:0 21535 chr20 62701690 62701690 1 + G A UCEC 62701689 + 62701669 62701709 41 CGTATCTCCAACCTGAAGGATGCCAAGAACCCTGACCTGCG CGTATCTCCAACCTGAAGGATACCAAGAACCCTGACCTGCG < 41bp 0.563616602662063 0.890896598273708 0.35606104 0.83189476 prediction 0.654559991223291 Functional Gain - TCEA2 ENSG00000171703 CDS Human protein_coding chr20:62701689 chr20:62701690 nonsynonymous SNV 0.482 0 22 hPsi_associated_SNPs_27811 0 0 1 0 1 Cytosol 0.438671995505264 0.438689344782266 0.66378952 0 hPsi_site_21535 iPseU_CNN:0.66378952;iRNA_PseU:0 21536 chr17 26712103 26712103 1 + C A UCEC 26712102 + 26712082 26712122 41 TCAAGACCTTCGCCAACTATTCTACGTGCGACCGCAGCAAC TCAAGACCTTCGCCAACTATTATACGTGCGACCGCAGCAAC < 41bp 0.454265299242436 0.827278804530231 0.34576887 0.6708406 prediction 0.654557609060461 Functional Gain - SARM1 ENSG00000004139 CDS Human protein_coding chr17:26712102 chr17:26712103 nonsynonymous SNV 0.907 0 22 hPsi_associated_SNPs_27812 0 0 0 0 1 chromatin 0.438718593047423 0.438667442507939 0.3416812 0 hPsi_site_21536 iPseU_CNN:0.3416812;iRNA_PseU:0 21537 chr20 21687362 21687362 1 + C A TGCT 21687361 + 21687341 21687381 41 CAAGCAAGGAGACCCTGGCATCTTTGCCTGGGAGATCCGCG CAAGCAAGGAGACCCTGGCATATTTGCCTGGGAGATCCGCG < 41bp 0.453760590169892 0.827267189432909 0.426068 0.62640893 prediction 0.654534378865818 Functional Gain - PAX1 ENSG00000125813 CDS Human protein_coding chr20:21687361 chr20:21687362 synonymous SNV . 0 22 hPsi_associated_SNPs_27813 0 0 0 0 0 unknown 0.438718496395845 0.438718594277454 0.25281786 0 hPsi_site_21537 iPseU_CNN:0.25281786;iRNA_PseU:0 21538 chr1 40981007 40981007 1 + C A BLCA 40981006 + 40980986 40981026 41 ATGCCCAGCAGGGAGGCTTCTCTGTGAAGTCTTTGGGTGAC ATGCCCAGCAGGGAGGCTTCTATGTGAAGTCTTTGGGTGAC < 41bp 0.465167811473033 0.827266106993557 0.221156 0.42967507 prediction 0.654532213987113 Functional Gain - EXO5 ENSG00000164002 CDS Human protein_coding chr1:40981006 chr1:40981007 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_27814 0 0 1 0 0 nucleus 0.438717411032355 0.43871878697941 0 0 hPsi_site_21538 iPseU_CNN:0;iRNA_PseU:0 21539 chr8 17500224 17500224 1 + G A UCEC 17500223 + 17500203 17500243 41 GTCATTACAGTGGAAGACTTTGAGACGATTGATGCAGGATA GTCATTACAGTGGAAGACTTTAAGACGATTGATGCAGGATA < 41bp 0.431275796274922 0.827263407810389 0.24623752 0.2593553 prediction 0.654526815620779 Functional Gain - PDGFRL ENSG00000104213 CDS Human protein_coding chr8:17500223 chr8:17500224 nonsynonymous SNV 0.989 2 22 hPsi_associated_SNPs_27815 0 0 0 0 0 exosome 0.438716727247685 0.438765765828271 0 0 hPsi_site_21539 iPseU_CNN:0;iRNA_PseU:0 21540 chr8 19700402 19700402 1 + G A LUSC 19700401 + 19700381 19700421 41 TTGTACCAGCAAGGCTATCATGCCATACTGCCTCCATTTAA TTGTACCAGCAAGGCTATCATACCATACTGCCTCCATTTAA < 41bp 0.417912129068838 0.827263217002047 0.13268316 0.2229374 prediction 0.654526434004095 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19700401 chr8:19700402 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27816 0 0 1 0 2 Cytosol 0.440199326384533 0.438844400475409 0 0 hPsi_site_21540 iPseU_CNN:0;iRNA_PseU:0 21541 chr7 116199131 116199131 1 + C A ESCA 116199130 + 116199110 116199150 41 GCTGTCTGCCCTCTTTGGCATCCCGATGGCACTCATCTGGG GCTGTCTGCCCTCTTTGGCATACCGATGGCACTCATCTGGG < 41bp 0.529067036633536 0.856328520540252 0.1966154 0.66748095 prediction 0.654522967813432 Functional Gain - CAV1 ENSG00000105974 CDS Human protein_coding chr7:116199130 chr7:116199131 synonymous SNV . 0 22 hPsi_associated_SNPs_27817 0 0 1 0 0 Ribosome 0.438718592993478 0.438718910033696 0.3349619 0 hPsi_site_21541 iPseU_CNN:0.3349619;iRNA_PseU:0 21542 chr14 88480159 88480159 1 + G A rs529658209 88480158 + 88480138 88480178 41 AAAATGGATCGAATCTGGGGTGAGGGGGAAGTGATGTGGGG AAAATGGATCGAATCTGGGGTAAGGGGGAAGTGATGTGGGG < 41bp 0.527484099495447 0.854745470876615 0.48964873 0.76386046 prediction 0.654522742762336 Functional Gain - GPR65 ENSG00000258407 ncRNA_intronic Human antisense chr14:88480158 chr14:88480159 . . 0 22 hPsi_associated_SNPs_27818 0 0 0 0 0 exosome 0.438718931940111 0.438713661079737 0.52772092 0 hPsi_site_21542 iPseU_CNN:0.52772092;iRNA_PseU:0 21543 chr1 151373261 151373261 1 + G A UCEC 151373260 + 151373240 151373280 41 CTTCCTCGGTTATGTGGACATGCTTGGTGTAGCCTATGAAG CTTCCTCGGTTATGTGGACATACTTGGTGTAGCCTATGAAG < 41bp 0.443520793620332 0.827258572463546 0.19410753 0.39239568 prediction 0.654517144927092 Functional Gain - PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151373260 chr1:151373261 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27819 0 0 1 0 2 Ribosome 0.438714051701568 0.43871858051033 0 0 hPsi_site_21543 iPseU_CNN:0;iRNA_PseU:0 21544 chr12 53646663 53646663 1 + C A BLCA 53646662 + 53646642 53646682 41 CTTTTGTAGGCCTCCTGGCCTCCTGCCTGGGGCTGGAACTG CTTTTGTAGGCCTCCTGGCCTACTGCCTGGGGCTGGAACTG < 41bp 0.481150879506496 0.827257449029387 0.2171514 0.3926423 prediction 0.654514898058774 Functional Gain - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53646662 chr12:53646663 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_27820 0 0 1 0 1 Endoplasmic reticulum 0.438718591760689 0.438719977944144 0 0 hPsi_site_21544 iPseU_CNN:0;iRNA_PseU:0 21545 chr1 154247632 154247632 1 + C A UCEC 154247631 + 154247611 154247651 41 CATCTCTCTGCTCTTCCAGATCTTGATTCCCAGGTTTCCCA CATCTCTCTGCTCTTCCAGATATTGATTCCCAGGTTTCCCA < 41bp 0.541086265352168 0.868342613912702 0.5214578 0.62359625 prediction 0.654512697121067 Functional Gain - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154247631 chr1:154247632 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27821 0 0 1 0 1 Cytosol 0.438718541651811 0.438731298621076 0.2042769 0 hPsi_site_21545 iPseU_CNN:0.2042769;iRNA_PseU:0 21546 chr13 52313253 52313253 1 + G A rs77486739 52313252 + 52313232 52313272 41 TCAGGCAGTTCAGATCACTCTGTCATCATGTGGGACATCGG TCAGGCAGTTCAGATCACTCTATCATCATGTGGGACATCGG < 41bp 0.414357258151864 0.827254507239344 0.2797796 0.5090638 prediction 0.654509014478688 Functional Gain - WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52313252 chr13:52313253 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_27822 0 0 1 2 2 Cytosol 0.438715528684286 0.438716672170004 0.0181275999999999 0 hPsi_site_21546 iPseU_CNN:0.0181275999999999;iRNA_PseU:0 21547 chr10 12197864 12197864 1 + G A PAAD 12197863 + 12197843 12197883 41 TCTGGGATTTCCCTCTTTATTGCCACCAACATCTGTGAGAC TCTGGGATTTCCCTCTTTATTACCACCAACATCTGTGAGAC < 41bp 0.575925511090215 0.903179720090951 0.29969758 0.39698866 prediction 0.654508418001472 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12197863 chr10:12197864 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27823 0 0 0 0 2 Ribosome 0.438718594035647 0.438718593016579 0 0 hPsi_site_21547 iPseU_CNN:0;iRNA_PseU:0 21548 chr20 29845479 29845479 1 + C A COAD 29845478 + 29845458 29845498 41 ACACTCAGAATGCTGCCAGATCATTTCTCACCCCTCTCAGG ACACTCAGAATGCTGCCAGATAATTTCTCACCCCTCTCAGG < 41bp 0.504988221364671 0.832239898406065 0.2829395 0.6131662 prediction 0.654503354082788 Functional Gain - DEFB115 ENSG00000215547 CDS Human protein_coding chr20:29845478 chr20:29845479 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27824 0 0 0 0 1 unknown 0.438726563787761 0.438718584712887 0.2263324 0 hPsi_site_21548 iPseU_CNN:0.2263324;iRNA_PseU:0 21549 chr12 54675624 54675624 1 + G A LGG 54675623 + 54675603 54675643 41 CGCTCCAGGGGCTTTGGGTTTGTCACATATGCCACTGTGGA CGCTCCAGGGGCTTTGGGTTTATCACATATGCCACTGTGGA < 41bp 0.578890697419457 0.906135630104953 0.34758884 0.6198275 prediction 0.654489865370993 Functional Gain - HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54675623 chr12:54675624 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_27825 0 0 0 2 0 Cytosol 0.438718591343662 0.438718592835907 0.239655 0 hPsi_site_21549 iPseU_CNN:0.239655;iRNA_PseU:0 21550 chr19 49518846 49518846 1 + G T UCEC 49518845 + 49518825 49518865 41 CCAGGGTACAGAAGTGCAGGTGGATGACATCAAGCGGGTCT CCAGGGTACAGAAGTGCAGGTTGATGACATCAAGCGGGTCT < 41bp 0.497766331822501 0.827243156929867 0.21979177 0.24042785 prediction 0.654486313859735 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49518845 chr19:49518846 nonsynonymous SNV 0.954 0 22 hPsi_associated_SNPs_27826 0 0 0 0 1 chromatin 0.438692432240082 0.438701654092029 0 0 hPsi_site_21550 iPseU_CNN:0;iRNA_PseU:0 21551 chr14 104639519 104639519 1 + C A rs61743517 104639518 + 104639498 104639538 41 CGAGGTGGCCCCTGGCAGCCTCCAGGACACCCAGTCTCCGG CGAGGTGGCCCCTGGCAGCCTACAGGACACCCAGTCTCCGG < 41bp 0.472299423088109 0.827240870940613 0.24269831 0.60746926 prediction 0.654481741881226 Functional Gain - KIF26A ENSG00000066735 CDS Human protein_coding chr14:104639518 chr14:104639519 synonymous SNV . 0 22 hPsi_associated_SNPs_27827 0 0 1 0 1 Ribosome 0.438718593527368 0.438718592430013 0.21493852 0 hPsi_site_21551 iPseU_CNN:0.21493852;iRNA_PseU:0 21552 chr17 72945934 72945934 1 + G A rs530160108 72945933 + 72945913 72945953 41 AGAAGAGCACCTGGTCCAAGTGTGGCTCTGGACATCCTCAG AGAAGAGCACCTGGTCCAAGTATGGCTCTGGACATCCTCAG < 41bp 0.504222224511898 0.831461305754457 0.6528487 0.7169979 prediction 0.654478162485119 Functional Gain - OTOP3 ENSG00000182938 UTR3 Human protein_coding chr17:72945933 chr17:72945934 . . 0 22 hPsi_associated_SNPs_27828 0 0 0 0 0 unknown 0.43875543818882 0.439572356604403 0.1282984 0 hPsi_site_21552 iPseU_CNN:0.1282984;iRNA_PseU:0 21553 chr1 196715039 196715039 1 + G A LUSC 196715038 + 196715018 196715058 41 TATGCTCCAGCTTCATCAGTTGAGTACCAATGCCAGAACTT TATGCTCCAGCTTCATCAGTTAAGTACCAATGCCAGAACTT < 41bp 0.432316666973261 0.827237887741898 0.28904364 0.48667458 prediction 0.654475775483796 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196715038 chr1:196715039 nonsynonymous SNV 0.671 1 22 hPsi_associated_SNPs_27829 0 0 0 0 2 chromatin 0.438069551994851 0.438434783405159 0 0 hPsi_site_21553 iPseU_CNN:0;iRNA_PseU:0 21554 chr11 125708307 125708307 1 + C A READ 125708306 + 125708286 125708326 41 ACTGTGCTGTGACAGAAACTTCTGTAATGTCTTCTAATGGA ACTGTGCTGTGACAGAAACTTATGTAATGTCTTCTAATGGA < 41bp 0.49443378644164 0.827237073731528 0.34870425 0.39584076 prediction 0.654474147463056 Functional Gain - PATE4 ENSG00000237353 CDS Human protein_coding chr11:125708306 chr11:125708307 nonsynonymous SNV 0.819 1 22 hPsi_associated_SNPs_27830 0 0 0 1 0 unknown 0.438158686726153 0.438485480741847 0 0 hPsi_site_21554 iPseU_CNN:0;iRNA_PseU:0 21555 chr1 248685445 248685445 1 + G A LIHC 248685444 + 248685424 248685464 41 GTGCTCCCTCACTGTGCAGCTGCCCCTCTGTGGTCATCGCA GTGCTCCCTCACTGTGCAGCTACCCCTCTGTGGTCATCGCA < 41bp 0.43358076585209 0.827236485764474 0.1686844 0.33148864 prediction 0.654472971528948 Functional Gain - OR2G6 ENSG00000188558 CDS Human protein_coding chr1:248685444 chr1:248685445 synonymous SNV . 0 22 hPsi_associated_SNPs_27831 0 0 0 0 0 unknown 0.421147748210419 0.431838433738531 0 0 hPsi_site_21555 iPseU_CNN:0;iRNA_PseU:0 21556 chr1 154246353 154246353 1 + C A COAD 154246352 + 154246332 154246372 41 AGATAGTCACCAGCCCAGGATCTTTGGGGGGGTCTTGGAGA AGATAGTCACCAGCCCAGGATATTTGGGGGGGTCTTGGAGA < 41bp 0.537723894636082 0.8649423266917 0.44692132 0.37291178 prediction 0.654436864111236 Functional Gain - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154246352 chr1:154246353 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27832 0 0 1 0 0 Cytosol 0.438718593248024 0.438717869650613 0 0 hPsi_site_21556 iPseU_CNN:0;iRNA_PseU:0 21557 chr1 235505383 235505383 1 + G A LUSC 235505382 + 235505362 235505402 41 AGTTTACTCATCGATGATATTGAAGACAACTCAAAACTCCG AGTTTACTCATCGATGATATTAAAGACAACTCAAAACTCCG < 41bp 0.439194672725793 0.82721667411577 0.20530853 0.3019482 prediction 0.654433348231539 Functional Gain - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505382 chr1:235505383 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27833 0 0 1 0 1 Ribosome 0.438699411230578 0.43871867694666 0 0 hPsi_site_21557 iPseU_CNN:0;iRNA_PseU:0 21558 chr8 87540872 87540872 1 + G A rs10956871 87540871 + 87540851 87540891 41 GTCAGACCCTTTATGTGTGTTGTTTTTGAATACAAGTGGTC GTCAGACCCTTTATGTGTGTTATTTTTGAATACAAGTGGTC < 41bp 0.43243509870642 0.827215886195133 0.33043754 0.32856795 prediction 0.654431772390266 Functional Gain - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87540871 chr8:87540872 synonymous SNV . 0 22 hPsi_associated_SNPs_27834 0 0 1 0 1 Nucleus 0.438716771948307 0.438718143522183 0 0 hPsi_site_21558 iPseU_CNN:0;iRNA_PseU:0 21559 chr8 146220894 146220894 1 + G A HNSC 146220893 + 146220873 146220913 41 CACCTGGCAGGTCTTCTACCTGTGATGCTTCTTCAAGGCTA CACCTGGCAGGTCTTCTACCTATGATGCTTCTTCAAGGCTA < 41bp 0.469106271279562 0.827214547236313 0.26841086 0.33794424 prediction 0.654429094472626 Functional Gain - TMED10P1 ENSG00000196922;ENSG00000254618 ncRNA_exonic Human other chr8:146220893 chr8:146220894 . . 0 22 hPsi_associated_SNPs_27835 0 0 0 0 0 unknown 0.438729877406621 0.438718517721512 0 0 hPsi_site_21559 iPseU_CNN:0;iRNA_PseU:0 21560 chr11 45827823 45827823 1 + C A UCEC 45827822 + 45827802 45827842 41 CACCGTCTTCAACGTGCTGCTCTCCTACCTGCTGCTCAAGC CACCGTCTTCAACGTGCTGCTATCCTACCTGCTGCTCAAGC < 41bp 0.530631710271332 0.857845040669184 0.23519197 0.5385085 prediction 0.654426660795703 Functional Gain - SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45827822 chr11:45827823 synonymous SNV . 0 22 hPsi_associated_SNPs_27836 0 0 0 0 1 Endoplasmic reticulum 0.438718592760445 0.438718649062529 0.0770169999999999 0 hPsi_site_21560 iPseU_CNN:0.0770169999999999;iRNA_PseU:0 21561 chr11 55587801 55587801 1 + C A LUAD 55587800 + 55587780 55587820 41 CATCCTCAAGATGCGTTCAGTCAGTGGGCGCCGCAAAGCCT CATCCTCAAGATGCGTTCAGTAAGTGGGCGCCGCAAAGCCT < 41bp 0.518622041564559 0.845834445411828 0.25164276 0.5584801 prediction 0.654424807694539 Functional Gain - OR5D18 ENSG00000186119 CDS Human protein_coding chr11:55587800 chr11:55587801 synonymous SNV . 0 22 hPsi_associated_SNPs_27837 0 0 0 0 0 unknown 0.407167134414939 0.435136209320793 0.1169602 0 hPsi_site_21561 iPseU_CNN:0.1169602;iRNA_PseU:0 21562 chr10 70507209 70507209 1 + G T STAD 70507208 + 70507188 70507228 41 GCACCACAGACAACATTTGGTGTTCAGACTCAGCCCCAGCC GCACCACAGACAACATTTGGTTTTCAGACTCAGCCCCAGCC < 41bp 0.501898757055147 0.829108216089799 0.37617916 0.7041097 prediction 0.654418918069305 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70507208 chr10:70507209 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27838 0 0 1 0 1 Nucleus 0.438717057132991 0.438751083624984 0.4082194 0 hPsi_site_21562 iPseU_CNN:0.4082194;iRNA_PseU:0 21563 chr11 4928915 4928915 1 + G A SKCM 4928914 + 4928894 4928934 41 GCTCAAGAATTCTTCATTCATGGATTCACTGTCATGGAATC GCTCAAGAATTCTTCATTCATAGATTCACTGTCATGGAATC < 41bp 0.546843927549421 0.874046891472807 0.25004154 0.40950432 prediction 0.654405927846771 Functional Gain - OR51A7 ENSG00000176895 CDS Human protein_coding chr11:4928914 chr11:4928915 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27839 0 0 0 0 0 exosome 0.438700044768846 0.438649687435089 0 0 hPsi_site_21563 iPseU_CNN:0;iRNA_PseU:0 21564 chr19 41765801 41765801 1 + G A BLCA 41765800 + 41765780 41765820 41 GCAGCCCCAGGGCAGGAGGATGGTGCCTGAGACAACCCTCC GCAGCCCCAGGGCAGGAGGATAGTGCCTGAGACAACCCTCC < 41bp 0.412225651543542 0.827200915278213 0.3398179 0.7636262 prediction 0.654401830556426 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41765800 chr19:41765801 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_27840 0 0 0 0 0 Nucleus 0.438718592995101 0.438718592995103 0.5272524 0 hPsi_site_21564 iPseU_CNN:0.5272524;iRNA_PseU:0 21565 chr8 102087704 102087704 1 + G A rs148652955 102087703 + 102087683 102087723 41 GGATCCAGGACTCCTGGCTTTGTCTCTTCCCTAGTTGCCCA GGATCCAGGACTCCTGGCTTTATCTCTTCCCTAGTTGCCCA < 41bp 0.543030132843961 0.870228212589685 0.5426278 0.7096571 prediction 0.65439615949145 Functional Gain - FLJ42969 ENSG00000248599 ncRNA_exonic Human lincRNA chr8:102087703 chr8:102087704 . . 0 22 hPsi_associated_SNPs_27841 0 0 0 0 0 unknown 0.438718592993295 0.438718592994958 0.3340586 0 hPsi_site_21565 iPseU_CNN:0.3340586;iRNA_PseU:0 21566 chr1 17944950 17944950 1 + G A COAD 17944949 + 17944929 17944969 41 GTGGGCCCGGCAGGAGGGTCTGCACCACCCCCACCCCCACG GTGGGCCCGGCAGGAGGGTCTACACCACCCCCACCCCCACG < 41bp 0.444153324119161 0.827197321305933 0.34501815 0.62316793 prediction 0.654394642611867 Functional Gain - ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17944949 chr1:17944950 synonymous SNV . 0 22 hPsi_associated_SNPs_27842 0 0 1 0 1 Nucleus 0.438317536962924 0.438717976698873 0.24633586 0 hPsi_site_21566 iPseU_CNN:0.24633586;iRNA_PseU:0 21567 chr9 120476160 120476160 1 + G A LUSC 120476159 + 120476139 120476179 41 AGAATGACTTTGCTTGTACTTGTGAACACCAGAGTTTCCTG AGAATGACTTTGCTTGTACTTATGAACACCAGAGTTTCCTG < 41bp 0.430557427957631 0.827195374066066 0.23905692 0.5563131 prediction 0.654390748132133 Functional Gain - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120476159 chr9:120476160 nonsynonymous SNV 0.932 4 22 hPsi_associated_SNPs_27843 0 0 0 0 0 cytosol 0.438717939162448 0.438714252991566 0.1126262 0 hPsi_site_21567 iPseU_CNN:0.1126262;iRNA_PseU:0 21568 chrX 151817747 151817747 1 + G T LUSC 151817746 + 151817726 151817766 41 AGCAGCTTGTTCCCTGGATCTGCATAAATTCCCTATGGACA AGCAGCTTGTTCCCTGGATCTTCATAAATTCCCTATGGACA < 41bp 0.500744570307984 0.827938071840714 0.33706623 0.47199345 prediction 0.654387003065461 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151817746 chrX:151817747 synonymous SNV . 0 22 hPsi_associated_SNPs_27844 0 0 0 0 2 chromatin 0.43871861632028 0.438753105725138 0 0 hPsi_site_21568 iPseU_CNN:0;iRNA_PseU:0 21569 chr17 37213356 37213356 1 + G A BLCA 37213355 + 37213335 37213375 41 TTTGCGGTTCCCACCAAGAGTGACAAAACCTTGCTAGTGTG TTTGCGGTTCCCACCAAGAGTAACAAAACCTTGCTAGTGTG < 41bp 0.44948990716613 0.827190636275785 0.31972057 0.6031786 prediction 0.654381272551571 Functional Gain - LOC100131347 ENSG00000263818 ncRNA_exonic Human transcribed_processed_pseudogene chr17:37213355 chr17:37213356 . . 0 22 hPsi_associated_SNPs_27845 0 0 0 0 1 unknown 0.43841092277668 0.438810672616914 0.2063572 0 hPsi_site_21569 iPseU_CNN:0.2063572;iRNA_PseU:0 21570 chr12 6497633 6497633 1 + G A UCEC 6497632 + 6497612 6497652 41 TCCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCT TCCTTGCCACCGTCTTCTCCTACATCTGGAAGAGCCACCCT < 41bp 0.580333550033223 0.907523218927292 0.22902736 0.25650275 prediction 0.654379337788138 Functional Gain - LTBR ENSG00000111321 CDS Human protein_coding chr12:6497632 chr12:6497633 nonsynonymous SNV 0.372 1 22 hPsi_associated_SNPs_27846 0 0 1 0 2 Endoplasmic reticulum 0.438717716260211 0.438719442222094 0 0 hPsi_site_21570 iPseU_CNN:0;iRNA_PseU:0 21571 chrX 27765072 27765072 1 + C A rs62623432 27765071 + 27765051 27765091 41 CTTAGGGACTGAAAGCCTGTTCAGCAGCCCAGAGGAGCAGT CTTAGGGACTGAAAGCCTGTTAAGCAGCCCAGAGGAGCAGT < 41bp 0.490734313423639 0.827188538187599 0.33844692 0.4101408 prediction 0.654377076375198 Functional Gain - DCAF8L2 ENSG00000189186 CDS Human protein_coding chrX:27765071 chrX:27765072 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_27847 0 0 0 0 0 exosome 0.438718655352741 0.438718593279262 0 0 hPsi_site_21571 iPseU_CNN:0;iRNA_PseU:0 21572 chr16 71570631 71570631 1 + G A LUSC 71570630 + 71570610 71570650 41 GCTGTTTCTGGTTTCCCAGATGGCCATCTTGGCTCTATTCT GCTGTTTCTGGTTTCCCAGATAGCCATCTTGGCTCTATTCT < 41bp 0.433181893421779 0.82718016188323 0.2799776 0.3383281 prediction 0.65436032376646 Functional Gain - CHST4 ENSG00000140835 CDS Human protein_coding chr16:71570630 chr16:71570631 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27848 0 0 0 0 1 exosome 0.438718591548566 0.438718868159071 0 0 hPsi_site_21572 iPseU_CNN:0;iRNA_PseU:0 21573 chr17 18003008 18003008 1 + G A DLBC 18003007 + 18002987 18003027 41 GGCTGACGTCATCATCATGATGCTGGATGCCACCAAGGGAG GGCTGACGTCATCATCATGATACTGGATGCCACCAAGGGAG < 41bp 0.576315720447417 0.903495201273788 0.34395868 0.7060865 prediction 0.654358961652744 Functional Gain - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18003007 chr17:18003008 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27849 0 0 1 1 2 Cytosol 0.438708215981237 0.435044538746147 0.412173 0 hPsi_site_21573 iPseU_CNN:0.412173;iRNA_PseU:0 21574 chr1 120050171 120050171 1 + G A LUSC 120050170 + 120050150 120050190 41 GAGGATCATCCGCCTCTTGGTGAAGGAGAAGGAGCTGAAGG GAGGATCATCCGCCTCTTGGTAAAGGAGAAGGAGCTGAAGG < 41bp 0.426252501968077 0.82717888365558 0.28764877 0.65000445 prediction 0.654357767311161 Functional Gain - HSD3B1 ENSG00000203857 CDS Human protein_coding chr1:120050170 chr1:120050171 synonymous SNV . 0 22 hPsi_associated_SNPs_27850 0 0 0 0 1 exosome 0.438717767490712 0.438718595544785 0.3000089 0 hPsi_site_21574 iPseU_CNN:0.3000089;iRNA_PseU:0 21575 chr1 17657611 17657611 1 + G A SKCM 17657610 + 17657590 17657630 41 GGTAGAGGTGACCCTGACGATGAAAGTGGCCAGTGGTAGCA GGTAGAGGTGACCCTGACGATAAAAGTGGCCAGTGGTAGCA < 41bp 0.41039537900791 0.827176663498128 0.2568466 0.29582536 prediction 0.654353326996257 Functional Gain - PADI4 ENSG00000159339 CDS Human protein_coding chr1:17657610 chr1:17657611 nonsynonymous SNV 0.042 1 22 hPsi_associated_SNPs_27851 0 0 0 0 1 exosome 0.438718757573937 0.4387363966241 0 0 hPsi_site_21575 iPseU_CNN:0;iRNA_PseU:0 21576 chr7 129987617 129987617 1 + C A UCEC 129987616 + 129987596 129987636 41 TGTTTTTCTAGGGACCAGGTTCTTCGAGTCCTGGCCAAAGA TGTTTTTCTAGGGACCAGGTTATTCGAGTCCTGGCCAAAGA < 41bp 0.465247630057305 0.827175877940185 0.36626035 0.5418109 prediction 0.65435175588037 Functional Gain - CPA5 ENSG00000158525 CDS Human protein_coding chr7:129987616 chr7:129987617 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27852 0 0 0 0 2 exosome 0.439514219086707 0.438736715365717 0.0836218 0 hPsi_site_21576 iPseU_CNN:0.0836218;iRNA_PseU:0 21577 chr15 25457043 25457043 1 + G A HNSC 25457042 + 25457022 25457062 41 CCCAACCTAGGTGAGAAATTTGGAGGAGGATGCTGGGATCC CCCAACCTAGGTGAGAAATTTAGAGGAGGATGCTGGGATCC < 41bp 0.527093452196637 0.854264049707128 0.31684026 0.78362024 prediction 0.654341195020983 Functional Gain - PWAR4 ENSG00000224078 ncRNA_intronic Human processed_transcript chr15:25457042 chr15:25457043 . . 0 22 hPsi_associated_SNPs_27853 0 0 0 1 0 unknown 0.438718579998547 0.438718592996705 0.56724048 0 hPsi_site_21577 iPseU_CNN:0.56724048;iRNA_PseU:0 21578 chrX 70347824 70347824 1 + C A UCEC 70347823 + 70347803 70347843 41 TATGCGCTGGGCACCTGAGTTCATGATCGACACTCTAGAGA TATGCGCTGGGCACCTGAGTTAATGATCGACACTCTAGAGA < 41bp 0.459480522314502 0.827164350088155 0.56473213 0.6514639 prediction 0.65432870017631 Functional Gain - MED12 ENSG00000184634 CDS Human protein_coding chrX:70347823 chrX:70347824 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27854 1 0 1 0 1 Cytosol 0.438978868432921 0.43966880865092 0.17346354 0 hPsi_site_21578 iPseU_CNN:0.17346354;iRNA_PseU:0 21579 chr6 43188302 43188302 1 + C A OV 43188301 + 43188281 43188321 41 CAGCCCACCGGAGCCTTCATTCGTGCCATCGTCTCCTCGCC CAGCCCACCGGAGCCTTCATTAGTGCCATCGTCTCCTCGCC < 41bp 0.459390920278322 0.82715945004571 0.64495564 0.66837823 prediction 0.65431890009142 Functional Gain - CUL9 ENSG00000112659 CDS Human protein_coding chr6:43188301 chr6:43188302 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_27855 0 0 0 0 1 chromatin 0.438669268264096 0.438718573026688 0.0468451799999998 0 hPsi_site_21579 iPseU_CNN:0.0468451799999998;iRNA_PseU:0 21580 chr6 112671505 112671505 1 + C A STAD 112671504 + 112671484 112671524 41 AACACCCACCTGGAGAGAATTCCTGCAAGCCCTCGCCTTCG AACACCCACCTGGAGAGAATTACTGCAAGCCCTCGCCTTCG < 41bp 0.464384340911635 0.827157496891441 0.28975153 0.6425933 prediction 0.654314993782882 Functional Gain - RFPL4B ENSG00000251258 CDS Human protein_coding chr6:112671504 chr6:112671505 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_27856 0 0 0 0 0 unknown 0.438717521774003 0.438719150929878 0.2851866 0 hPsi_site_21580 iPseU_CNN:0.2851866;iRNA_PseU:0 21581 chr18 32682069 32682069 1 + G T COAD 32682068 + 32682048 32682088 41 ATTCCTCCTCCTGACCCTGGTGAACAGATCTTCAACCTGCC ATTCCTCCTCCTGACCCTGGTTAACAGATCTTCAACCTGCC < 41bp 0.4981767086185 0.827152931668704 0.24408433 0.24867848 prediction 0.654305863337408 Functional Gain - MAPRE2 ENSG00000166974 CDS Human protein_coding chr18:32682068 chr18:32682069 stopgain 0.997 1 22 hPsi_associated_SNPs_27857 0 0 1 0 1 Ribosome 0.438718592996477 0.438718588490371 0 0 hPsi_site_21581 iPseU_CNN:0;iRNA_PseU:0 21582 chr15 79587012 79587012 1 + C A UCEC 79587011 + 79586991 79587031 41 TTCTCACACTAGGCCTGGCTTCCTGCCGCCTTTAAATGTGA TTCTCACACTAGGCCTGGCTTACTGCCGCCTTTAAATGTGA < 41bp 0.480130509931416 0.827152641004571 0.2961998 0.34667456 prediction 0.654305282009143 Functional Gain - ANKRD34C ENSG00000235711 CDS Human protein_coding chr15:79587011 chr15:79587012 nonsynonymous SNV 0.292 1 22 hPsi_associated_SNPs_27858 0 0 0 0 0 unknown 0.438718592962226 0.437001134993783 0 0 hPsi_site_21582 iPseU_CNN:0;iRNA_PseU:0 21583 chr22 23438116 23438116 1 + C A rs41296233 23438115 + 23438095 23438135 41 CCTCATCATCTACAATGCCATCGACTCGCTGACCCGCATCA CCTCATCATCTACAATGCCATAGACTCGCTGACCCGCATCA < 41bp 0.538193796119018 0.865346371680963 0.3655362 0.495261 prediction 0.654305151123891 Functional Gain - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438115 chr22:23438116 synonymous SNV . 0 22 hPsi_associated_SNPs_27859 0 0 0 0 0 Ribosome 0.451295982862846 0.432401209047037 0 0 hPsi_site_21583 iPseU_CNN:0;iRNA_PseU:0 21584 chr19 49439303 49439303 1 + G A LUAD 49439302 + 49439282 49439322 41 ACCCTAGAGGTGGCCTACATTGGCACCCAGCACCCCCAGCA ACCCTAGAGGTGGCCTACATTAGCACCCAGCACCCCCAGCA < 41bp 0.408514708523182 0.827152397879965 0.22479218 0.3254758 prediction 0.65430479575993 Functional Gain - DHDH ENSG00000104808 CDS Human protein_coding chr19:49439302 chr19:49439303 nonsynonymous SNV 0.987 3 22 hPsi_associated_SNPs_27860 0 0 0 0 1 cytosol 0.438719453286291 0.438718592994233 0 0 hPsi_site_21584 iPseU_CNN:0;iRNA_PseU:0 21585 chr16 70594456 70594456 1 + G A BLCA 70594455 + 70594435 70594475 41 CGGTACCTGGGGTCCCGTCCTGTGAAGCTCTTCCGAGTCCG CGGTACCTGGGGTCCCGTCCTATGAAGCTCTTCCGAGTCCG < 41bp 0.412583276936756 0.827143858943686 0.22486043 0.32787108 prediction 0.654287717887372 Functional Gain - SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70594455 chr16:70594456 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27861 0 0 1 0 2 Cytosol 0.438722186273739 0.438720168754318 0 0 hPsi_site_21585 iPseU_CNN:0;iRNA_PseU:0 21586 chr20 31619489 31619489 1 + G A LIHC 31619488 + 31619468 31619508 41 GTGCCTGGCACTCTGCAGCCTGCTGACTGGCACGCGAGCTG GTGCCTGGCACTCTGCAGCCTACTGACTGGCACGCGAGCTG < 41bp 0.42321575319449 0.827141309507844 0.24433574 0.57509357 prediction 0.654282619015689 Functional Gain - BPIFB6 ENSG00000167104 CDS Human protein_coding chr20:31619488 chr20:31619489 synonymous SNV . 0 22 hPsi_associated_SNPs_27862 0 0 0 0 2 unknown 0.438811278404605 0.438541756762808 0.15018714 0 hPsi_site_21586 iPseU_CNN:0.15018714;iRNA_PseU:0 21587 chr20 44520960 44520960 1 + C A UCEC 44520959 + 44520939 44520979 41 TACAACCCCTATTCTTGGAATCTGGTATAGCTGGAGCTGTG TACAACCCCTATTCTTGGAATATGGTATAGCTGGAGCTGTG < 41bp 0.477012896134159 0.827140949981991 0.5937823 0.63895035 prediction 0.654281899963982 Functional Gain - CTSA ENSG00000064601 CDS Human protein_coding chr20:44520959 chr20:44520960 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_27863 0 0 0 1 2 Ribosome 0.43870543114278 0.438717290436645 0.0903361 0 hPsi_site_21587 iPseU_CNN:0.0903361;iRNA_PseU:0 21588 chr1 230410235 230410235 1 + G A LIHC 230410234 + 230410214 230410254 41 GTCGGTGAAGCACATGGATTTGTGCCTTACTGTGGTGGACC GTCGGTGAAGCACATGGATTTATGCCTTACTGTGGTGGACC < 41bp 0.575596468108321 0.902733168463053 0.8481766 0.9008771 prediction 0.654273400709463 Functional Gain - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230410234 chr1:230410235 synonymous SNV . 0 22 hPsi_associated_SNPs_27864 0 0 1 2 1 Endoplasmic reticulum 0.438697162638551 0.438497648297649 0.105401 0 hPsi_site_21588 iPseU_CNN:0.105401;iRNA_PseU:0 21589 chr1 226026976 226026976 1 + C A ESCA 226026975 + 226026955 226026995 41 GCTGATGCTGCGGCTGGGCTTCCAGGAATTCTACATTCAAG GCTGATGCTGCGGCTGGGCTTACAGGAATTCTACATTCAAG < 41bp 0.549588365634253 0.876723922178577 0.248121 0.41495955 prediction 0.654271113088648 Functional Gain - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026975 chr1:226026976 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27865 0 0 1 0 1 Endoplasmic reticulum 0.438707027129456 0.438930463152647 0 0 hPsi_site_21589 iPseU_CNN:0;iRNA_PseU:0 21590 chr6 84569507 84569507 1 + G A SARC 84569506 + 84569486 84569526 41 GGGCCGGGGTTTGAAGATGCTGAACGTCCCTTCCCAGTCTT GGGCCGGGGTTTGAAGATGCTAAACGTCCCTTCCCAGTCTT < 41bp 0.546353971109979 0.873480813023236 0.7546169 0.8842291 prediction 0.654253683826515 Functional Gain - CYB5R4 ENSG00000065615 CDS Human protein_coding chr6:84569506 chr6:84569507 synonymous SNV . 0 22 hPsi_associated_SNPs_27866 0 0 1 0 1 Ribosome 0.438718416922297 0.438721471256019 0.2592244 0 hPsi_site_21590 iPseU_CNN:0.2592244;iRNA_PseU:0 21591 chr7 134252979 134252979 1 + G A COAD 134252978 + 134252958 134252998 41 GAATATCGCCACATTGACTGTGCCTATTTCTATGAGAATCA GAATATCGCCACATTGACTGTACCTATTTCTATGAGAATCA < 41bp 0.40755079787037 0.827125288698135 0.34023234 0.64109534 prediction 0.654250577396271 Functional Gain - AKR1B15 ENSG00000227471 CDS Human protein_coding chr7:134252978 chr7:134252979 nonsynonymous SNV 0.592 2 22 hPsi_associated_SNPs_27867 0 0 0 0 2 exosome 0.437093027615816 0.435432213842012 0.28219068 0 hPsi_site_21591 iPseU_CNN:0.28219068;iRNA_PseU:0 21592 chr1 153941846 153941846 1 + G A BRCA 153941845 + 153941825 153941865 41 CATTTATGGTGCCTGATTCCTGCATGGTCAGTGAGCTGCCC CATTTATGGTGCCTGATTCCTACATGGTCAGTGAGCTGCCC < 41bp 0.417405309832013 0.827123666907282 0.2247554 0.30719 prediction 0.654247333814565 Functional Gain - CREB3L4 ENSG00000143578 CDS Human protein_coding chr1:153941845 chr1:153941846 nonsynonymous SNV 0.787 0 22 hPsi_associated_SNPs_27868 0 0 0 0 2 exosome 0.438667345611644 0.438699706574768 0 0 hPsi_site_21592 iPseU_CNN:0;iRNA_PseU:0 21593 chr6 107854760 107854760 1 + C A UCEC 107854759 + 107854739 107854779 41 GGGAAGTGAGGTGAAAAGCTTCTGCAGCGAGAAGTGCTTTG GGGAAGTGAGGTGAAAAGCTTATGCAGCGAGAAGTGCTTTG < 41bp 0.528903225112767 0.856021351493415 0.33429402 0.3596572 prediction 0.654236252761295 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107854759 chr6:107854760 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27869 0 0 1 0 2 cytosol 0.438814408595377 0.4387431187965 0 0 hPsi_site_21593 iPseU_CNN:0;iRNA_PseU:0 21594 chr11 6220756 6220756 1 + G A UCEC 6220755 + 6220735 6220775 41 CCGATCTGTGCCATATGCTGTGTGCCTGGTCCAGATGTTCT CCGATCTGTGCCATATGCTGTATGCCTGGTCCAGATGTTCT < 41bp 0.568746995385983 0.89586156674305 0.5463226 0.72993916 prediction 0.654229142714134 Functional Gain - OR52W1 ENSG00000175485 CDS Human protein_coding chr11:6220755 chr11:6220756 synonymous SNV . 0 22 hPsi_associated_SNPs_27870 0 0 0 0 0 unknown 0.438844935951321 0.438655830225377 0.36723312 0 hPsi_site_21594 iPseU_CNN:0.36723312;iRNA_PseU:0 21595 chrX 79698351 79698351 1 + C A UCEC 79698350 + 79698330 79698370 41 CAGGTTGTTAAAGATGCAGTTCTAGACTGTCTACTTGACTT CAGGTTGTTAAAGATGCAGTTATAGACTGTCTACTTGACTT < 41bp 0.508750414004021 0.835862914565032 0.6088511 0.65950465 prediction 0.654225001122022 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79698350 chrX:79698351 nonsynonymous SNV 0.937 4 22 hPsi_associated_SNPs_27871 0 0 0 0 0 unknown 0.438973191385809 0.438190224473124 0.1013071 0 hPsi_site_21595 iPseU_CNN:0.1013071;iRNA_PseU:0 21596 chr12 40943730 40943730 1 + G A rs80014625 40943729 + 40943709 40943749 41 ATAGTCTCTGGCACAACAGTTGCACCTGGAAGTTCCAACAC ATAGTCTCTGGCACAACAGTTACACCTGGAAGTTCCAACAC < 41bp 0.554434266419625 0.881542218200253 0.24738738 0.6374916 prediction 0.654215903561255 Functional Gain - MUC19 ENSG00000205592 CDS Human processed_transcript chr12:40943729 chr12:40943730 unknown . 0 22 hPsi_associated_SNPs_27872 0 0 0 0 2 unknown 0.438980946250161 0.442511117922512 0.2749832 0 hPsi_site_21596 iPseU_CNN:0.2749832;iRNA_PseU:0 21597 chr3 161221302 161221302 1 + G A SKCM 161221301 + 161221281 161221321 41 GGCTTTAAAGGCTCCAAGGGTGAGTTGGCTAGAGTGCCCCG GGCTTTAAAGGCTCCAAGGGTAAGTTGGCTAGAGTGCCCCG < 41bp 0.572546916912813 0.899649164733408 0.5264329 0.91749805 prediction 0.654204495641189 Functional Gain - OTOL1 ENSG00000182447 CDS Human protein_coding chr3:161221301 chr3:161221302 nonsynonymous SNV 0.637 4 22 hPsi_associated_SNPs_27873 0 0 0 0 0 exosome 0.438718593005237 0.438718592995818 0.7821303 0 hPsi_site_21597 iPseU_CNN:0.7821303;iRNA_PseU:0 21598 chr15 59499802 59499802 1 + C A UCEC 59499801 + 59499781 59499821 41 GGATACTGCTCGTTTTCGTTTCTTGATTGGACAAAAGCTTG GGATACTGCTCGTTTTCGTTTATTGATTGGACAAAAGCTTG < 41bp 0.485797281409432 0.827099492220437 0.2694646 0.32087553 prediction 0.654198984440874 Functional Gain - LDHAL6B ENSG00000171989 CDS Human protein_coding chr15:59499801 chr15:59499802 nonsynonymous SNV 0.974 1 22 hPsi_associated_SNPs_27874 0 0 0 0 0 unknown 0.427641998695872 0.439288368173158 0 0 hPsi_site_21598 iPseU_CNN:0;iRNA_PseU:0 21599 chr7 150748943 150748943 1 + G A HNSC 150748942 + 150748922 150748962 41 TTCTTTGAGGCCCTCAACTATGAGACCGTGGAGCAGAAGAA TTCTTTGAGGCCCTCAACTATAAGACCGTGGAGCAGAAGAA < 41bp 0.411066895706916 0.827090655785046 0.22126767 0.22933367 prediction 0.654181311570093 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150748942 chr7:150748943 nonsynonymous SNV 0.972 2 22 hPsi_associated_SNPs_27875 0 0 1 0 2 exosome 0.438718504481898 0.438718592995451 0 0 hPsi_site_21599 iPseU_CNN:0;iRNA_PseU:0 21600 chr1 150234987 150234987 1 + C A LGG 150234986 + 150234966 150235006 41 AGTGAGGCTGCTGAGAGGCCTCAGGGCCTGGCTGTCCTGGG AGTGAGGCTGCTGAGAGGCCTAAGGGCCTGGCTGTCCTGGG < 41bp 0.457678814874069 0.827090407810745 0.16042757 0.1834195 prediction 0.654180815621491 Functional Gain - CA14 ENSG00000118298 CDS Human protein_coding chr1:150234986 chr1:150234987 nonsynonymous SNV 0.800 3 22 hPsi_associated_SNPs_27876 0 0 0 0 2 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_21600 iPseU_CNN:0;iRNA_PseU:0 21601 chr20 21329033 21329033 1 + C A LUAD 21329032 + 21329012 21329052 41 CCAGCTGCAAGTGGTAATTTTCTACCTCCATCATGGCGGAA CCAGCTGCAAGTGGTAATTTTATACCTCCATCATGGCGGAA < 41bp 0.54377229369172 0.870857576769689 0.27956098 0.34893113 prediction 0.654170566155938 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21329032 chr20:21329033 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_27877 0 0 1 0 2 Cytosol 0.438718593001457 0.438718590738887 0 0 hPsi_site_21601 iPseU_CNN:0;iRNA_PseU:0 21602 chr9 80919814 80919814 1 + G T SKCM 80919813 + 80919793 80919833 41 GCAGAAGAAGCCAAGAAGTTTGGGACTATAAATATCGTTCA GCAGAAGAAGCCAAGAAGTTTTGGACTATAAATATCGTTCA < 41bp 0.503810056033737 0.830893778142543 0.32504123 0.411603 prediction 0.654167444217611 Functional Gain - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80919813 chr9:80919814 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_27878 0 0 1 0 1 Ribosome 0.43871859299569 0.438718594058616 0 0 hPsi_site_21602 iPseU_CNN:0;iRNA_PseU:0 21603 chr3 97852357 97852357 1 + G A rs576551305 97852356 + 97852336 97852376 41 GCAAGCAGATGATCAAGATATGGTGGAGCCTCTATTCTACA GCAAGCAGATGATCAAGATATAGTGGAGCCTCTATTCTACA < 41bp 0.543723855026811 0.870806693354183 0.25679892 0.6251303 prediction 0.654165676654744 Functional Gain - OR5H1 ENSG00000231192 CDS Human protein_coding chr3:97852356 chr3:97852357 nonsynonymous SNV 0.758 1 22 hPsi_associated_SNPs_27879 0 0 0 0 0 unknown 0.438718686222066 0.438730265228075 0.2502606 0 hPsi_site_21603 iPseU_CNN:0.2502606;iRNA_PseU:0 21604 chr13 103289511 103289511 1 + G T LUAD 103289510 + 103289490 103289530 41 GGTTCAGTGTCCCAGCCATTTGGAACTCATGAATCAATGTA GGTTCAGTGTCCCAGCCATTTTGAACTCATGAATCAATGTA < 41bp 0.501002264941793 0.828080283999197 0.20121488 0.26554248 prediction 0.654156038114808 Functional Gain - TPP2 ENSG00000134900 CDS Human protein_coding chr13:103289510 chr13:103289511 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27880 0 0 1 0 2 Nucleus 0.438718584780235 0.438864870918355 0 0 hPsi_site_21604 iPseU_CNN:0;iRNA_PseU:0 21605 chr17 72436061 72436061 1 + G A SKCM 72436060 + 72436040 72436080 41 TGTGTGACCGCTCTGGGGCGTGGGGCATCGTCCTGGAGGCC TGTGTGACCGCTCTGGGGCGTAGGGCATCGTCCTGGAGGCC < 41bp 0.411744022325153 0.827074684291001 0.28812194 0.67299175 prediction 0.654149368582001 Functional Gain - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436060 chr17:72436061 stopgain 0.969 1 22 hPsi_associated_SNPs_27881 0 0 1 0 0 nucleus 0.438727664921456 0.438718569883818 0.3459835 0 hPsi_site_21605 iPseU_CNN:0.3459835;iRNA_PseU:0 21606 chr16 1259352 1259352 1 + C A UCEC 1259351 + 1259331 1259371 41 GGTGGCCCTGCCCAGCGACTTCTTCCTGCGCATCGACAGCC GGTGGCCCTGCCCAGCGACTTATTCCTGCGCATCGACAGCC < 41bp 0.53113871664981 0.858212302293955 0.3426675 0.66437495 prediction 0.654147171288288 Functional Gain - CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1259351 chr16:1259352 nonsynonymous SNV 0.978 1 22 hPsi_associated_SNPs_27882 0 0 0 0 1 nucleolus 0.43871859163984 0.438708675360869 0.3287499 0 hPsi_site_21606 iPseU_CNN:0.3287499;iRNA_PseU:0 21607 chr18 61654490 61654490 1 + G A UCEC 61654489 + 61654469 61654509 41 AAACCAACTGCATCTTGTTCTGTGGCAGGTTCTCTTCTCCG AAACCAACTGCATCTTGTTCTATGGCAGGTTCTCTTCTCCG < 41bp 0.42119719808046 0.827069492508626 0.38247794 0.52700526 prediction 0.654138985017253 Functional Gain - SERPINB8 ENSG00000166401 CDS Human protein_coding chr18:61654489 chr18:61654490 nonsynonymous SNV 0.686 4 22 hPsi_associated_SNPs_27883 0 0 0 0 0 nucleus 0.438717032457162 0.438718605240794 0.0540105200000001 0 hPsi_site_21607 iPseU_CNN:0.0540105200000001;iRNA_PseU:0 21608 chr1 112246033 112246033 1 + C A BLCA 112246032 + 112246012 112246052 41 CTAGTATATTCTATTACAGCTCAGTCCACGTTTAACGACTT CTAGTATATTCTATTACAGCTAAGTCCACGTTTAACGACTT < 41bp 0.518927228808728 0.845995350875006 0.3431787 0.5404283 prediction 0.654136244132556 Functional Gain - RAP1A ENSG00000116473 CDS Human protein_coding chr1:112246032 chr1:112246033 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27884 0 0 1 0 2 Cytosol 0.438717045414096 0.438716965544327 0.0808565999999999 0 hPsi_site_21608 iPseU_CNN:0.0808565999999999;iRNA_PseU:0 21609 chr3 58156328 58156328 1 + C T SKCM 58156329 - 58156309 58156349 41 CGCAGGGGGTGGTGGGCCCATGGACCCCGATCAGCAGCATG CGCAGGGGGTGGTGGGCCCATAGACCCCGATCAGCAGCATG < 41bp 0.558884422770743 0.88594203763082 0.27208805 0.3417161 prediction 0.654115229720153 Functional Gain - FLNB ENSG00000136068 CDS Human protein_coding chr3:58156329 chr3:58156328 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27885 0 0 0 0 0 Cytosol 0.438717409828811 0.438511963777791 0 0 hPsi_site_21609 iPseU_CNN:0;iRNA_PseU:0 21610 chr12 55614818 55614818 1 + G A SKCM 55614817 + 55614797 55614837 41 CTCATCTAAGATATGATCTGTGAAAATCACACCAGAGTCAC CTCATCTAAGATATGATCTGTAAAAATCACACCAGAGTCAC < 41bp 0.475982015379461 0.827051112365843 0.23018047 0.5498164 prediction 0.654102224731686 Functional Gain - OR10A7 ENSG00000179919 CDS Human protein_coding chr12:55614817 chr12:55614818 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_27886 0 0 0 0 0 unknown 0.424804105825469 0.438672631216529 0.0996328 0 hPsi_site_21610 iPseU_CNN:0.0996328;iRNA_PseU:0 21611 chr19 58187717 58187717 1 + C A COAD 58187716 + 58187696 58187736 41 ATTGCAAAGACTTTATAGGATCTTTCACTCATGGCTGCAAC ATTGCAAAGACTTTATAGGATATTTCACTCATGGCTGCAAC < 41bp 0.477687876663976 0.827048719134717 0.4235066 0.53728867 prediction 0.654097438269434 Functional Gain - ZSCAN4 ENSG00000180532 CDS Human protein_coding chr19:58187716 chr19:58187717 synonymous SNV . 0 22 hPsi_associated_SNPs_27887 0 0 0 0 0 exosome 0.44256204660567 0.437103378219462 0.07457734 0 hPsi_site_21611 iPseU_CNN:0.07457734;iRNA_PseU:0 21612 chr7 150930071 150930071 1 + C A rs188793238 150930070 + 150930050 150930090 41 CGTTCTAGGGCTAGACTTGGTCTCTGATCGCCGAGAGGTAG CGTTCTAGGGCTAGACTTGGTATCTGATCGCCGAGAGGTAG < 41bp 0.50172413198403 0.828769726647674 0.46998203 0.8493594 prediction 0.654091189327288 Functional Gain - CHPF2 ENSG00000033100 UTR5 Human protein_coding chr7:150930070 chr7:150930071 . . 0 22 hPsi_associated_SNPs_27888 0 0 1 0 0 Nucleus 0.437426056800627 0.438713436165104 0.6987188 0 hPsi_site_21612 iPseU_CNN:0.6987188;iRNA_PseU:0 21613 chr3 38149148 38149148 1 + C A UCEC 38149147 + 38149127 38149167 41 AGCCAGGTGGAGGTTAGAAATCTCTACCTGGGTGTGCCCAC AGCCAGGTGGAGGTTAGAAATATCTACCTGGGTGTGCCCAC < 41bp 0.465480755535537 0.82704033904833 0.4909199 0.60962147 prediction 0.654080678096661 Functional Gain - DLEC1 ENSG00000008226 CDS Human protein_coding chr3:38149147 chr3:38149148 nonsynonymous SNV 0.828 0 22 hPsi_associated_SNPs_27889 0 0 0 0 2 chromatin 0.438718498402547 0.438719092624665 0.21924294 0 hPsi_site_21613 iPseU_CNN:0.21924294;iRNA_PseU:0 21614 chr20 43243275 43243275 1 + C A UCEC 43243274 + 43243254 43243294 41 TCGGAATGCGGTCCCTGACATCCAGGGAGACTCAGAGGCTG TCGGAATGCGGTCCCTGACATACAGGGAGACTCAGAGGCTG < 41bp 0.54309440454723 0.870127080122274 0.26395473 0.5275138 prediction 0.654065351150088 Functional Gain - PKIG ENSG00000168734 CDS Human protein_coding chr20:43243274 chr20:43243275 synonymous SNV . 0 22 hPsi_associated_SNPs_27890 0 0 1 0 1 Ribosome 0.438720104704334 0.438714703304793 0.0550276000000001 0 hPsi_site_21614 iPseU_CNN:0.0550276000000001;iRNA_PseU:0 21615 chr1 168153231 168153231 1 + G A HNSC 168153230 + 168153210 168153250 41 CATGGGTCTGGCTTTGGAATTGAGTTCAATGCTACAGATGC CATGGGTCTGGCTTTGGAATTAAGTTCAATGCTACAGATGC < 41bp 0.558974257741559 0.886006918656102 0.24138653 0.3190718 prediction 0.654065321829086 Functional Gain - TIPRL ENSG00000143155 CDS Human protein_coding chr1:168153230 chr1:168153231 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_27891 0 0 1 0 2 Ribosome 0.438760969958746 0.438880016295781 0 0 hPsi_site_21615 iPseU_CNN:0;iRNA_PseU:0 21616 chr1 43317311 43317311 1 + G A STAD 43317310 + 43317290 43317330 41 GAGAGACCTTATGAGTGCACTGAGTGTGGGCGGACCTTCAG GAGAGACCTTATGAGTGCACTAAGTGTGGGCGGACCTTCAG < 41bp 0.429034592777697 0.827026721284374 0.25859815 0.6691814 prediction 0.654053442568748 Functional Gain - ZNF691 ENSG00000164011 CDS Human protein_coding chr1:43317310 chr1:43317311 nonsynonymous SNV 0.797 3 22 hPsi_associated_SNPs_27892 0 0 1 0 0 Cytosol 0.438719634027687 0.438720577734138 0.3383628 0 hPsi_site_21616 iPseU_CNN:0.3383628;iRNA_PseU:0 21617 chr19 52448864 52448864 1 + G A UCEC 52448863 + 52448843 52448883 41 TAACATGGTGACTCTGCAGATGCCTTCTGTGGCAGCTCAGA TAACATGGTGACTCTGCAGATACCTTCTGTGGCAGCTCAGA < 41bp 0.462452336530128 0.827026196116495 0.3215289 0.41548997 prediction 0.65405239223299 Functional Gain - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52448863 chr19:52448864 nonsynonymous SNV 0.540 0 22 hPsi_associated_SNPs_27893 0 0 1 0 0 nucleus 0.433317902990983 0.425078359795496 0 0 hPsi_site_21617 iPseU_CNN:0;iRNA_PseU:0 21618 chr15 41001241 41001241 1 + C A UCEC 41001240 + 41001220 41001260 41 TAGGTGGAATTGAGACTGGATCTATCACAGAAATGTTTGGA TAGGTGGAATTGAGACTGGATATATCACAGAAATGTTTGGA < 41bp 0.530312919179229 0.857338208837056 0.29889604 0.42511544 prediction 0.654050579315654 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41001240 chr15:41001241 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27894 0 0 1 0 1 Cytosol 0.43872777884361 0.433676325267195 0 0 hPsi_site_21618 iPseU_CNN:0;iRNA_PseU:0 21619 chr10 134463980 134463980 1 + G A UCEC 134463979 + 134463959 134463999 41 AGGGCTCGAGTCTACCTGGATGAAAACTACAAATCCCAGGA AGGGCTCGAGTCTACCTGGATAAAAACTACAAATCCCAGGA < 41bp 0.412047493957736 0.827023139586203 0.2758596 0.73429376 prediction 0.654046279172407 Functional Gain - INPP5A ENSG00000068383 CDS Human protein_coding chr10:134463979 chr10:134463980 nonsynonymous SNV 0.908 1 22 hPsi_associated_SNPs_27895 0 0 1 0 2 Nucleus 0.43871859333268 0.438718569628122 0.46858752 0 hPsi_site_21619 iPseU_CNN:0.46858752;iRNA_PseU:0 21620 chr16 84693447 84693447 1 + G A BLCA 84693446 + 84693426 84693466 41 GTGGCCATCGGCGGCCGGAATGAGAACGGAGCGCTCTCTTC GTGGCCATCGGCGGCCGGAATAAGAACGGAGCGCTCTCTTC < 41bp 0.411131192244599 0.827022386859728 0.39839953 0.67197204 prediction 0.654044773719456 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84693446 chr16:84693447 nonsynonymous SNV 0.973 1 22 hPsi_associated_SNPs_27896 0 0 1 0 2 chromatin 0.438723796121052 0.438718610353594 0.34394408 0 hPsi_site_21620 iPseU_CNN:0.34394408;iRNA_PseU:0 21621 chr19 45209106 45209106 1 + C A LGG 45209105 + 45209085 45209125 41 AGAACACCAAGACCCTGCTATCTGGATCTGCCTCAGTCGTG AGAACACCAAGACCCTGCTATATGGATCTGCCTCAGTCGTG < 41bp 0.460692965856704 0.827021775985717 0.6741196 0.78268206 prediction 0.654043551971433 Functional Gain - CEACAM16 ENSG00000213892 CDS Human protein_coding chr19:45209105 chr19:45209106 nonsynonymous SNV 0.595 2 22 hPsi_associated_SNPs_27897 0 0 0 0 1 exosome 0.43871859349125 0.438731171683499 0.21712492 0 hPsi_site_21621 iPseU_CNN:0.21712492;iRNA_PseU:0 21622 chr2 217315710 217315710 1 + G A UCEC 217315709 + 217315689 217315729 41 CAGCGCAAGATAGTGGTGATTGCCCCAGGACGGATCAATGC CAGCGCAAGATAGTGGTGATTACCCCAGGACGGATCAATGC < 41bp 0.406088833480313 0.827016521528953 0.21538123 0.3976996 prediction 0.654033043057906 Functional Gain - SMARCAL1 ENSG00000138375 CDS Human protein_coding chr2:217315709 chr2:217315710 nonsynonymous SNV 0.035 0 22 hPsi_associated_SNPs_27898 0 0 1 0 1 chromatin 0.438710319172297 0.43864110607989 0 0 hPsi_site_21622 iPseU_CNN:0;iRNA_PseU:0 21623 chr17 51901108 51901108 1 + C A LUSC 51901107 + 51901087 51901127 41 GGACCTGGATATCATCACCGTCCCCTCGGACAATGTGGTTA GGACCTGGATATCATCACCGTACCCTCGGACAATGTGGTTA < 41bp 0.534634986582141 0.861650544985014 0.18633676 0.61308706 prediction 0.654031116805746 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51901107 chr17:51901108 synonymous SNV . 0 22 hPsi_associated_SNPs_27899 0 0 0 0 0 exosome 0.43892811353807 0.438054181430476 0.22617412 0 hPsi_site_21623 iPseU_CNN:0.22617412;iRNA_PseU:0 21624 chr2 220349121 220349121 1 + G A ESCA 220349120 + 220349100 220349140 41 GAAAGCCCGAGTTCCCACGGTGCCCCCCAGGCCAGGCAGCA GAAAGCCCGAGTTCCCACGGTACCCCCCAGGCCAGGCAGCA < 41bp 0.432321992113325 0.827013099609907 0.33097023 0.82630086 prediction 0.654026199219814 Functional Gain - SPEG ENSG00000072195 CDS Human protein_coding chr2:220349120 chr2:220349121 synonymous SNV . 0 22 hPsi_associated_SNPs_27900 0 0 0 0 0 Nucleus 0.438718485397967 0.43875659385668 0.65260172 0 hPsi_site_21624 iPseU_CNN:0.65260172;iRNA_PseU:0 21625 chr12 121432043 121432043 1 + G A HNSC 121432042 + 121432022 121432062 41 AACCTCGTCACGGAGGTGCGTGTCTACAACTGGTTTGCCAA AACCTCGTCACGGAGGTGCGTATCTACAACTGGTTTGCCAA < 41bp 0.42080017557257 0.827010447248266 0.4178084 0.79251415 prediction 0.654020894496533 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121432042 chr12:121432043 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27901 0 0 1 0 1 cytosol 0.438718766431066 0.438718593080227 0.5850283 0 hPsi_site_21625 iPseU_CNN:0.5850283;iRNA_PseU:0 21626 chr3 50256311 50256311 1 + G A SKCM 50256310 + 50256290 50256330 41 CGGCATGTGCTTATTGCCGTTGGCCTGCTCACTTGTATCAA CGGCATGTGCTTATTGCCGTTAGCCTGCTCACTTGTATCAA < 41bp 0.435924772147675 0.827009210728226 0.21993446 0.42389074 prediction 0.654018421456453 Functional Gain - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50256310 chr3:50256311 . 0.414 0 22 hPsi_associated_SNPs_27902 0 0 1 0 2 exosome 0.438718527153336 0.438648694785606 0 0 hPsi_site_21626 iPseU_CNN:0;iRNA_PseU:0 21627 chr22 17602838 17602838 1 + C A UCEC 17602837 + 17602817 17602857 41 CCATGTACCCAGCCCTGGGGTCGCGAGCCATCTCAGGGACG CCATGTACCCAGCCCTGGGGTAGCGAGCCATCTCAGGGACG < 41bp 0.484989195465884 0.827007973086612 0.22657716 0.33659413 prediction 0.654015946173223 Functional Gain - LINC01664 ENSG00000235478 CDS Human lincRNA chr22:17602837 chr22:17602838 stopgain . 0 22 hPsi_associated_SNPs_27903 0 0 0 0 0 unknown 0.438680287158872 0.438718593038416 0 0 hPsi_site_21627 iPseU_CNN:0;iRNA_PseU:0 21628 chr9 99700232 99700232 1 + C A UCEC 99700231 + 99700211 99700251 41 CCCAGATCCACAGATGGATTTCTTGGCCCTAAGCCAGGAGC CCCAGATCCACAGATGGATTTATTGGCCCTAAGCCAGGAGC < 41bp 0.539996796496898 0.867004672986896 0.24076828 0.41046825 prediction 0.654015752979995 Functional Gain - NUTM2G ENSG00000188152 CDS Human protein_coding chr9:99700231 chr9:99700232 nonsynonymous SNV 0.072 0 22 hPsi_associated_SNPs_27904 0 0 0 0 2 chromatin 0.438718538426823 0.438719093066032 0 0 hPsi_site_21628 iPseU_CNN:0;iRNA_PseU:0 21629 chr4 36292065 36292065 1 + C A COAD 36292064 + 36292044 36292084 41 ATTACAGCACCATCATATGTTCTACAACAACTAGAATGCCG ATTACAGCACCATCATATGTTATACAACAACTAGAATGCCG < 41bp 0.527491173584749 0.854498601602115 0.28403446 0.4096003 prediction 0.654014856034732 Functional Gain - DTHD1 ENSG00000197057 CDS Human protein_coding chr4:36292064 chr4:36292065 nonsynonymous SNV 0.066 1 22 hPsi_associated_SNPs_27905 0 0 0 0 1 exosome 0.464603037843862 0.438756454491842 0 0 hPsi_site_21629 iPseU_CNN:0;iRNA_PseU:0 21630 chr8 70498676 70498676 1 + C A UCEC 70498675 + 70498655 70498695 41 GGCTTGGATTAATCAAGAATTCTCGCTTCTATAATTACACT GGCTTGGATTAATCAAGAATTATCGCTTCTATAATTACACT < 41bp 0.478000334707604 0.827004312080115 0.23558965 0.30071574 prediction 0.654008624160229 Functional Gain - SULF1 ENSG00000137573 CDS Human protein_coding chr8:70498675 chr8:70498676 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_27906 0 0 0 0 2 Nucleus 0.4387185929951 0.438718592987053 0 0 hPsi_site_21630 iPseU_CNN:0;iRNA_PseU:0 21631 chr11 66276699 66276699 1 + G A SKCM 66276698 + 66276678 66276718 41 CGATTCTGGAAGGGCCCCAGTGAGGCCCCATCTGGCCAAGC CGATTCTGGAAGGGCCCCAGTAAGGCCCCATCTGGCCAAGC < 41bp 0.409291094833062 0.82700270846833 0.3270651 0.6689181 prediction 0.65400541693666 Functional Gain - DPP3 ENSG00000254986;ENSG00000256349 CDS Human other chr11:66276698 chr11:66276699 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_27907 0 0 1 0 1 Nucleus 0.438718592549753 0.438718731288026 0.3378362 0 hPsi_site_21631 iPseU_CNN:0.3378362;iRNA_PseU:0 21632 chr16 20787360 20787360 1 + G A UCEC 20787359 + 20787339 20787379 41 GGTGGCTTGCAAATGTGGCCTGTCTGCGAACAGGTTAGTAA GGTGGCTTGCAAATGTGGCCTATCTGCGAACAGGTTAGTAA < 41bp 0.424177601080539 0.827001706993911 0.15668252 0.23030668 prediction 0.654003413987823 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787359 chr16:20787360 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_27908 0 0 1 0 1 Endoplasmic reticulum 0.438760610583606 0.438704600468335 0 0 hPsi_site_21632 iPseU_CNN:0;iRNA_PseU:0 21633 chr14 69727058 69727058 1 + C A UCEC 69727057 + 69727037 69727077 41 CATCCTGACCGTAGCCTGGATCCTGGGCACTTTCTACTACT CATCCTGACCGTAGCCTGGATACTGGGCACTTTCTACTACT < 41bp 0.524470846342982 0.851472017191591 0.27988493 0.62737876 prediction 0.654002341697217 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69727057 chr14:69727058 synonymous SNV . 0 22 hPsi_associated_SNPs_27909 0 0 0 0 0 chromatin 0.438718438366124 0.43868404696518 0.25475752 0 hPsi_site_21633 iPseU_CNN:0.25475752;iRNA_PseU:0 21634 chr10 49618124 49618124 1 + G A SKCM 49618123 + 49618103 49618143 41 TCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAA TCTTTGCCAAGTGATTCAGATAGAGCTAGATCATGAAAGAA < 41bp 0.41849920186565 0.826994720171595 0.20651516 0.2925625 prediction 0.65398944034319 Functional Gain - MAPK8 ENSG00000107643 CDS Human protein_coding chr10:49618123 chr10:49618124 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_27910 0 0 1 0 2 Cytosol 0.43872642612014 0.438724795463743 0 0 hPsi_site_21634 iPseU_CNN:0;iRNA_PseU:0 21635 chr9 125316283 125316283 1 + C A LUAD 125316282 + 125316262 125316302 41 CTTATGGGTGTGTATTTACTTCCTCCATCAACTTACTCTAC CTTATGGGTGTGTATTTACTTACTCCATCAACTTACTCTAC < 41bp 0.488306276224341 0.826993783131992 0.15880403 0.297 prediction 0.653987566263984 Functional Gain - OR1N2 ENSG00000171501 CDS Human protein_coding chr9:125316282 chr9:125316283 nonsynonymous SNV 0.062 2 22 hPsi_associated_SNPs_27911 0 0 0 0 0 unknown 0.438718223311124 0.438718566682161 0 0 hPsi_site_21635 iPseU_CNN:0;iRNA_PseU:0 21636 chr21 45103231 45103231 1 + G A SKCM 45103230 + 45103210 45103250 41 AGAGATGACTGTGGAACCTTTGAGGACACAGGGCCCCTTCT AGAGATGACTGTGGAACCTTTAAGGACACAGGGCCCCTTCT < 41bp 0.421852003488342 0.826991863545092 0.47812447 0.7220832 prediction 0.653983727090184 Functional Gain - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45103230 chr21:45103231 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_27912 0 0 1 0 2 Cytosol 0.438710475651765 0.438718592780212 0.4441664 0 hPsi_site_21636 iPseU_CNN:0.4441664;iRNA_PseU:0 21637 chr7 12728276 12728276 1 + G A LGG 12728275 + 12728255 12728295 41 GGAGTCCCTGTACTTATAGTTGCTAACAAACAAGATTTGAG GGAGTCCCTGTACTTATAGTTACTAACAAACAAGATTTGAG < 41bp 0.443759218190079 0.826990967893323 0.19040778 0.579093 prediction 0.653981935786647 Functional Gain - ARL4A ENSG00000122644 CDS Human protein_coding chr7:12728275 chr7:12728276 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27913 0 0 1 0 0 Cytosol 0.438720319967016 0.438719147308126 0.158186 0 hPsi_site_21637 iPseU_CNN:0.158186;iRNA_PseU:0 21638 chr20 57594590 57594590 1 + G A rs145280665 57594589 + 57594569 57594609 41 AGAGCAAGGATGCGTGAAATTGTCCATATTCAGATTGGCCA AGAGCAAGGATGCGTGAAATTATCCATATTCAGATTGGCCA < 41bp 0.43837360540699 0.826977063379962 0.32583177 0.62060755 prediction 0.653954126759924 Functional Gain - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57594589 chr20:57594590 nonsynonymous SNV 0.925 2 22 hPsi_associated_SNPs_27914 0 0 1 0 1 Cytosol 0.438685807696499 0.438617923264792 0.2412151 0 hPsi_site_21638 iPseU_CNN:0.2412151;iRNA_PseU:0 21639 chr11 71238795 71238795 1 + G A UCEC 71238794 + 71238774 71238814 41 CCAGTTGCTGCAATCCCTGCTGCTCCCAGTCTAGCTGCTGT CCAGTTGCTGCAATCCCTGCTACTCCCAGTCTAGCTGCTGT < 41bp 0.439837365016888 0.826974007841237 0.24978036 0.5241838 prediction 0.653948015682475 Functional Gain - KRTAP5-7 ENSG00000244411 CDS Human protein_coding chr11:71238794 chr11:71238795 nonsynonymous SNV 0.079 3 22 hPsi_associated_SNPs_27915 0 0 1 0 0 exosome 0.438700763454288 0.438720526856199 0.0483676 0 hPsi_site_21639 iPseU_CNN:0.0483676;iRNA_PseU:0 21640 chr22 31006915 31006915 1 + G T COAD 31006914 + 31006894 31006934 41 TGGGCCAGCACCTCTTACCTTGGATGGACCGGCTTTCCCTG TGGGCCAGCACCTCTTACCTTTGATGGACCGGCTTTCCCTG < 41bp 0.505805930828361 0.832779034095183 0.30824962 0.43563783 prediction 0.653946206533643 Functional Gain - TCN2 ENSG00000185339 CDS Human protein_coding chr22:31006914 chr22:31006915 nonsynonymous SNV 0.917 3 22 hPsi_associated_SNPs_27916 0 0 0 0 1 Endoplasmic reticulum 0.438718410371268 0.43871860892948 0 0 hPsi_site_21640 iPseU_CNN:0;iRNA_PseU:0 21641 chr5 175763757 175763757 1 + C A UCEC 175763756 + 175763736 175763776 41 ACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGA ACTACCATGGAAAGCCACCTTATGCGCTGCAAAGTGTTAGA < 41bp 0.537589620548468 0.864561555711054 0.27230895 0.25020042 prediction 0.653943870325172 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175763756 chr5:175763757 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_27917 0 0 1 0 1 chromatin 0.438720859476601 0.441370910131213 0 0 hPsi_site_21641 iPseU_CNN:0;iRNA_PseU:0 21642 chr11 11913582 11913582 1 + C A READ 11913581 + 11913561 11913601 41 GTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGAT GTCCGCTTCCAAGAGAAGGTTATGGGGGTTCTACCAGTGAT < 41bp 0.467221127575895 0.826971758860868 0.29965547 0.38315275 prediction 0.653943517721736 Functional Gain - USP47 ENSG00000170242 CDS Human protein_coding chr11:11913581 chr11:11913582 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27918 0 0 1 0 2 Nucleus 0.438737756651652 0.438717948558882 0 0 hPsi_site_21642 iPseU_CNN:0;iRNA_PseU:0 21643 chr1 101705584 101705584 1 + G A SKCM 101705583 + 101705563 101705603 41 GCGACCCATCATCGCCGGCATGGAATTCAGCCGCAGCAAAT GCGACCCATCATCGCCGGCATAGAATTCAGCCGCAGCAAAT < 41bp 0.41892891330643 0.826969570643742 0.24139237 0.3887277 prediction 0.653939141287484 Functional Gain - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101705583 chr1:101705584 nonsynonymous SNV 0.933 0 22 hPsi_associated_SNPs_27919 0 0 0 0 0 Endoplasmic reticulum 0.438718606131229 0.438763041447892 0 0 hPsi_site_21643 iPseU_CNN:0;iRNA_PseU:0 21644 chr4 184368494 184368494 1 + G A BLCA 184368493 + 184368473 184368513 41 AAAAGGAAATACAGAGGCAGTGAAATAGAAGATCTAGTACT AAAAGGAAATACAGAGGCAGTAAAATAGAAGATCTAGTACT < 41bp 0.47168608920744 0.826968592191455 0.24556041 0.26465988 prediction 0.65393718438291 Functional Gain - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184368493 chr4:184368494 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27920 0 0 0 0 0 Cytosol 0.43871857260832 0.438718382877984 0 0 hPsi_site_21644 iPseU_CNN:0;iRNA_PseU:0 21645 chr3 53891011 53891011 1 + G A BLCA 53891010 + 53890990 53891030 41 ATCGGGTTTTCTCAGGTGTTTGAGGTACTTTTTCTCTTCGT ATCGGGTTTTCTCAGGTGTTTAAGGTACTTTTTCTCTTCGT < 41bp 0.432020297669234 0.826965706726604 0.30122626 0.37459403 prediction 0.653931413453207 Functional Gain - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53891010 chr3:53891011 nonsynonymous SNV 0.410 1 22 hPsi_associated_SNPs_27921 0 0 1 0 1 Nucleus 0.438718585257262 0.438724123368591 0 0 hPsi_site_21645 iPseU_CNN:0;iRNA_PseU:0 21646 chr1 161697075 161697075 1 + C A HNSC 161697074 + 161697054 161697094 41 GCCTCCACCACCGCCCCAGCTCCATGGGCCGCAGCCTTGGC GCCTCCACCACCGCCCCAGCTACATGGGCCGCAGCCTTGGC < 41bp 0.538447592537262 0.865412661258706 0.27083907 0.43125534 prediction 0.653930137442887 Functional Gain - FCRLB ENSG00000162746 CDS Human protein_coding chr1:161697074 chr1:161697075 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_27922 0 0 0 0 1 Endoplasmic reticulum 0.43871565406963 0.43824969555612 0 0 hPsi_site_21646 iPseU_CNN:0;iRNA_PseU:0 21647 chr9 100243154 100243154 1 + G T OV 100243153 + 100243133 100243173 41 TCTTCCACAATCTATTGGCATGTGGACACCAGATGCAGTGC TCTTCCACAATCTATTGGCATTTGGACACCAGATGCAGTGC < 41bp 0.51160838571425 0.838568364956905 0.44509932 0.6209334 prediction 0.65391995848531 Functional Gain - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100243153 chr9:100243154 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27923 0 0 1 0 2 Ribosome 0.438718679707735 0.438719581693795 0.2418668 0 hPsi_site_21647 iPseU_CNN:0.2418668;iRNA_PseU:0 1,5-anhydroglucitol levels 21648 chr12 116972872 116972872 1 + G A COAD 116972871 + 116972851 116972891 41 GAAATGGGAGTAATAACCCTTGGCAGGAATGTTGCGATCCT GAAATGGGAGTAATAACCCTTAGCAGGAATGTTGCGATCCT < 41bp 0.453339550989483 0.826955165333054 0.21837711 0.30025136 prediction 0.653910330666109 Functional Gain - LINC00173 ENSG00000196668 ncRNA_exonic Human processed_transcript chr12:116972871 chr12:116972872 . . 0 22 hPsi_associated_SNPs_27924 0 0 1 0 0 unknown 0.43871860633597 0.438718592995102 0 0 hPsi_site_21648 iPseU_CNN:0;iRNA_PseU:0 21649 chr19 1272563 1272563 1 + C A rs192133179 1272562 + 1272542 1272582 41 TTCCCACTTTCGTAGTCATTTCGGTTCTGATCTTGTCAAAC TTCCCACTTTCGTAGTCATTTAGGTTCTGATCTTGTCAAAC < 41bp 0.513459609226975 0.840412406817608 0.7284023 0.79844356 prediction 0.653905595181266 Functional Gain - CIRBP ENSG00000099622 UTR3 Human protein_coding chr19:1272562 chr19:1272563 . . 0 22 hPsi_associated_SNPs_27925 0 0 1 1 0 Ribosome 0.438718850888336 0.438659041996294 0.14008252 0 hPsi_site_21649 iPseU_CNN:0.14008252;iRNA_PseU:0 21650 chr16 3021904 3021904 1 + G A COAD 3021903 + 3021883 3021923 41 GCAGCTGCACGCCGGCGTCGTGCCCGACCTGCTCTGGGCTG GCAGCTGCACGCCGGCGTCGTACCCGACCTGCTCTGGGCTG < 41bp 0.569922559408509 0.896872874414639 0.3023651 0.90023065 prediction 0.653900630012259 Functional Gain - PAQR4 ENSG00000162073 CDS Human protein_coding chr16:3021903 chr16:3021904 synonymous SNV . 0 22 hPsi_associated_SNPs_27926 0 0 1 0 0 Ribosome 0.438780886075459 0.439499888654408 0.8004613 0 hPsi_site_21650 iPseU_CNN:0.8004613;iRNA_PseU:0 21651 chrX 115304489 115304489 1 + G A UCEC 115304488 + 115304468 115304508 41 GCGTTAATCCGTTTCTGTATTGTTTTGTTGGAAACCGGTTC GCGTTAATCCGTTTCTGTATTATTTTGTTGGAAACCGGTTC < 41bp 0.432693159855916 0.826940674965942 0.46104953 0.58437103 prediction 0.653881349931883 Functional Gain - AGTR2 ENSG00000180772 CDS Human protein_coding chrX:115304488 chrX:115304489 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27927 0 0 0 0 0 unknown 0.438136135859573 0.438728929305644 0.16874206 0 hPsi_site_21651 iPseU_CNN:0.16874206;iRNA_PseU:0 21652 chrX 140995676 140995676 1 + C A UCEC 140995675 + 140995655 140995695 41 CATCGAGTCTTTCCCAGAGTTCTCCTGTGAGCTCCTTCCCC CATCGAGTCTTTCCCAGAGTTATCCTGTGAGCTCCTTCCCC < 41bp 0.51306694996756 0.840005027571172 0.2951839 0.44048002 prediction 0.653876155207223 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140995675 chrX:140995676 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_27928 0 0 0 0 0 exosome 0.438718593000796 0.438718596357357 0 0 hPsi_site_21652 iPseU_CNN:0;iRNA_PseU:0 21653 chrX 48419301 48419301 1 + G A BLCA 48419300 + 48419280 48419320 41 CGGGCTAGGGCTCTCTTTGCTGATTACCTGCAGTCAGAGGT CGGGCTAGGGCTCTCTTTGCTAATTACCTGCAGTCAGAGGT < 41bp 0.424160655549241 0.82693103884329 0.2521305 0.28135204 prediction 0.65386207768658 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48419300 chrX:48419301 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27929 0 0 1 0 0 nucleolus 0.438816918665887 0.438703072224291 0 0 hPsi_site_21653 iPseU_CNN:0;iRNA_PseU:0 21654 chr12 124144112 124144112 1 + C A STAD 124144111 + 124144091 124144131 41 TGAAGGTGCCTCAGATGCCTTCTCTTCTGCAGTATTTGCTG TGAAGGTGCCTCAGATGCCTTATCTTCTGCAGTATTTGCTG < 41bp 0.54413704692888 0.871066523944137 0.22767621 0.28843075 prediction 0.653858954030514 Functional Gain - GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144111 chr12:124144112 nonsynonymous SNV 0.840 3 22 hPsi_associated_SNPs_27930 0 0 1 0 2 Cytosol 0.435166588753069 0.438723218421888 0 0 hPsi_site_21654 iPseU_CNN:0;iRNA_PseU:0 21655 chr19 44611493 44611493 1 + C T rs202135306 44611494 - 44611474 44611514 41 TGAATGGTTTTTCTCCACTGTGGACTCGCTGATGTTTCAAA TGAATGGTTTTTCTCCACTGTAGACTCGCTGATGTTTCAAA < 41bp 0.560407701012809 0.887336176581977 0.35576582 0.57195985 prediction 0.653856951138336 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611494 chr19:44611493 nonsynonymous SNV 0.481 3 22 hPsi_associated_SNPs_27931 0 0 1 0 0 nucleus 0.438838457100285 0.439719395340687 0.1439197 0 hPsi_site_21655 iPseU_CNN:0.1439197;iRNA_PseU:0 21656 chr10 73053606 73053606 1 + G T HNSC 73053605 + 73053585 73053625 41 AGCAGTCAAGCGGCTCCAGCTGGCCGTCTTCGCCCCCGCCC AGCAGTCAAGCGGCTCCAGCTTGCCGTCTTCGCCCCCGCCC < 41bp 0.502926983431811 0.829854616447858 0.21988669 0.3102653 prediction 0.653855266032094 Functional Gain - UNC5B ENSG00000107731 CDS Human protein_coding chr10:73053605 chr10:73053606 synonymous SNV . 0 22 hPsi_associated_SNPs_27932 0 0 0 0 1 nucleoplasm 0.438721131999525 0.438705487750146 0 0 hPsi_site_21656 iPseU_CNN:0;iRNA_PseU:0 21657 chr19 42861011 42861011 1 + G A UCEC 42861010 + 42860990 42861030 41 CCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGC CCATCGCCCCGCTCCTTCCATACAGCCGCATATGTGCCCGC < 41bp 0.424920508888033 0.826925820212966 0.35529307 0.7412114 prediction 0.653851640425932 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42861010 chr19:42861011 nonsynonymous SNV 0.187 2 22 hPsi_associated_SNPs_27933 0 0 0 0 1 Endoplasmic reticulum 0.438718589450588 0.438715981680386 0.4824228 0 hPsi_site_21657 iPseU_CNN:0.4824228;iRNA_PseU:0 21658 chrX 150349408 150349408 1 + C A LUAD 150349407 + 150349387 150349427 41 CCATTTCAAGGCTGACTCTGTCCATTTCAAGGGTGACTCTG CCATTTCAAGGCTGACTCTGTACATTTCAAGGGTGACTCTG < 41bp 0.531035578342293 0.857953840065738 0.2932408 0.7086054 prediction 0.65383652344689 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150349407 chrX:150349408 synonymous SNV . 0 22 hPsi_associated_SNPs_27934 0 0 0 0 0 exosome 0.438718591964906 0.438717908832894 0.4172108 0 hPsi_site_21658 iPseU_CNN:0.4172108;iRNA_PseU:0 21659 chrX 108785847 108785847 1 + C A LUSC 108785846 + 108785826 108785866 41 ACTTCCTGCTGACTGCTCAGTCCACTCCCAACAATACTGTG ACTTCCTGCTGACTGCTCAGTACACTCCCAACAATACTGTG < 41bp 0.520017932968183 0.846934012172289 0.32142276 0.77357197 prediction 0.653832158408213 Functional Gain - NXT2 ENSG00000101888 CDS Human protein_coding chrX:108785846 chrX:108785847 nonsynonymous SNV 0.968 2 22 hPsi_associated_SNPs_27935 0 0 1 0 0 Ribosome 0.438718575458282 0.43871755910066 0.54714394 0 hPsi_site_21659 iPseU_CNN:0.54714394;iRNA_PseU:0 21660 chr2 173898668 173898668 1 + C A UCEC 173898667 + 173898647 173898687 41 GCCAAGCAAGTTCAAGAAGTTCTATGCGGAGTTTGAAAGTT GCCAAGCAAGTTCAAGAAGTTATATGCGGAGTTTGAAAGTT < 41bp 0.498270372219515 0.826910525916495 0.80722606 0.7172131 prediction 0.653821051832991 Functional Gain - RAPGEF4 ENSG00000091428 CDS Human protein_coding chr2:173898667 chr2:173898668 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27936 0 0 0 0 2 cytosol 0.437896776700196 0.438791444899739 0 0 hPsi_site_21660 iPseU_CNN:0;iRNA_PseU:0 21661 chr14 24707966 24707966 1 + C A COAD 24707965 + 24707945 24707985 41 CACCCAGCAGGTGAATCCAATCTTCAGTGAGGCGTGCTAGA CACCCAGCAGGTGAATCCAATATTCAGTGAGGCGTGCTAGA < 41bp 0.477936066130534 0.82690913933161 0.2511077 0.21860096 prediction 0.653818278663219 Functional Gain - GMPR2 ENSG00000100938 CDS Human protein_coding chr14:24707965 chr14:24707966 synonymous SNV . 0 22 hPsi_associated_SNPs_27937 0 0 1 0 0 Ribosome 0.438659973400456 0.433105024791402 0 0 hPsi_site_21661 iPseU_CNN:0;iRNA_PseU:0 21662 chr2 217012877 217012877 1 + G A SKCM 217012876 + 217012856 217012896 41 GCAGCATATTTGGAATATGCTGAATCCTCCCGCTGAGGTGA GCAGCATATTTGGAATATGCTAAATCCTCCCGCTGAGGTGA < 41bp 0.574872491055732 0.901778004950279 0.27100158 0.52446306 prediction 0.653811027789094 Functional Gain - XRCC5 ENSG00000079246 CDS Human protein_coding chr2:217012876 chr2:217012877 synonymous SNV . 0 22 hPsi_associated_SNPs_27938 0 0 1 0 0 Nucleus 0.438718592730067 0.438600253109673 0.04892612 0 hPsi_site_21662 iPseU_CNN:0.04892612;iRNA_PseU:0 21663 chr11 61213514 61213514 1 + C A GBM 61213513 + 61213493 61213533 41 CAGAGACTGCGTGCCCCAGATCTTGAGTACCTCTTTGAAAA CAGAGACTGCGTGCCCCAGATATTGAGTACCTCTTTGAAAA < 41bp 0.518375839035255 0.845276481992405 0.28094727 0.3724602 prediction 0.6538012859143 Functional Gain - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61213513 chr11:61213514 nonsynonymous SNV 0.978 5 22 hPsi_associated_SNPs_27939 0 0 1 0 0 chromatin 0.438728095646588 0.43814698756535 0 0 hPsi_site_21663 iPseU_CNN:0;iRNA_PseU:0 21664 chr12 57966024 57966024 1 + C A UCEC 57966023 + 57966003 57966043 41 AAGAGCCAGCAGAACCAGCTTCTGGTGGATGAGCTGTCTCA AAGAGCCAGCAGAACCAGCTTATGGTGGATGAGCTGTCTCA < 41bp 0.458134512061805 0.826890422159273 0.33557862 0.39215496 prediction 0.653780844318546 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57966023 chr12:57966024 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_27940 0 0 1 0 1 Cytosol 0.43871916429803 0.438718598924581 0 0 hPsi_site_21664 iPseU_CNN:0;iRNA_PseU:0 21665 chrX 129629298 129629298 1 + C A LUAD 129629297 + 129629277 129629317 41 CTTACAGATGAAAACAAACTTCTCCATCCCTTTGTCTTTGG CTTACAGATGAAAACAAACTTATCCATCCCTTTGTCTTTGG < 41bp 0.510961249715917 0.837847135744395 0.24451125 0.24054942 prediction 0.653771772056956 Functional Gain - FAM45BP ENSG00000221930 ncRNA_exonic Human transcribed_processed_pseudogene chrX:129629297 chrX:129629298 . . 0 22 hPsi_associated_SNPs_27941 0 0 0 0 0 unknown 0.438718461425568 0.438718591223198 0 0 hPsi_site_21665 iPseU_CNN:0;iRNA_PseU:0 21666 chr6 401680 401680 1 + C A UCEC 401679 + 401659 401699 41 AAGACTGTGCCAGAGCAGGATCTACTGGGACGGGCCCCTGG AAGACTGTGCCAGAGCAGGATATACTGGGACGGGCCCCTGG < 41bp 0.53661008750778 0.863495513501019 0.5924497 0.5863651 prediction 0.653770851986477 Functional Gain - IRF4 ENSG00000137265 CDS Human protein_coding chr6:401679 chr6:401680 synonymous SNV . 0 22 hPsi_associated_SNPs_27942 0 0 0 0 1 exosome 0.438741155117613 0.438718605961665 0 0 hPsi_site_21666 iPseU_CNN:0;iRNA_PseU:0 21667 chr22 20073633 20073633 1 + G A UCEC 20073632 + 20073612 20073652 41 GTCCAGTGGTGCAGAGGTAATGGACGTTGGCTCTGGTGGTG GTCCAGTGGTGCAGAGGTAATAGACGTTGGCTCTGGTGGTG < 41bp 0.413998277097135 0.82688499081148 0.17669281 0.4349924 prediction 0.65376998162296 Functional Gain - DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20073632 chr22:20073633 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27943 0 0 1 0 0 Nucleus 0.444667237365063 0.438643344319078 0 0 hPsi_site_21667 iPseU_CNN:0;iRNA_PseU:0 21668 chr6 106999822 106999822 1 + G A rs2297970 106999821 + 106999801 106999841 41 AGGACTGGGGAGGCAAAAATTGTAAGATCTCTTCTGTTCAA AGGACTGGGGAGGCAAAAATTATAAGATCTCTTCTGTTCAA < 41bp 0.428498475697162 0.826883126198121 0.35834986 0.4446957 prediction 0.653766252396242 Functional Gain - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:106999821 chr6:106999822 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_27944 0 0 0 0 2 unknown 0.438721922973417 0.438718683894303 0 0 hPsi_site_21668 iPseU_CNN:0;iRNA_PseU:0 21669 chr3 121980638 121980638 1 + C A UCEC 121980637 + 121980617 121980657 41 GTACTCTGATGAGGAAGAGATCCAGCATGTGGTAGAGGTGA GTACTCTGATGAGGAAGAGATACAGCATGTGGTAGAGGTGA < 41bp 0.4717173133379 0.826878357832962 0.23653463 0.31665158 prediction 0.653756715665924 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:121980637 chr3:121980638 synonymous SNV . 0 22 hPsi_associated_SNPs_27945 0 0 0 0 0 exosome 0.438717366909637 0.439005141036407 0 0 hPsi_site_21669 iPseU_CNN:0;iRNA_PseU:0 21670 chr22 32487627 32487627 1 + G A UCEC 32487626 + 32487606 32487646 41 AGGCCTGATGCTATCAGTCATGCTGGCCTCCCTCATGAGCT AGGCCTGATGCTATCAGTCATACTGGCCTCCCTCATGAGCT < 41bp 0.409662302661901 0.826873725798564 0.26310885 0.577291 prediction 0.653747451597128 Functional Gain - SLC5A1 ENSG00000100170 CDS Human protein_coding chr22:32487626 chr22:32487627 nonsynonymous SNV 0.593 2 22 hPsi_associated_SNPs_27946 0 0 0 0 1 Nucleus 0.436873569739156 0.442185580094127 0.154582 0 hPsi_site_21670 iPseU_CNN:0.154582;iRNA_PseU:0 21671 chr15 63893733 63893733 1 + C A BLCA 63893732 + 63893712 63893752 41 GTGTCCTGGGGACCGCCACCTCCAGGAGCCCCGGTGGTGAT GTGTCCTGGGGACCGCCACCTACAGGAGCCCCGGTGGTGAT < 41bp 0.5174429380037 0.844314343114993 0.34316647 0.55487406 prediction 0.653742810222586 Functional Gain - FBXL22 ENSG00000197361 CDS Human protein_coding chr15:63893732 chr15:63893733 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_27947 0 0 0 0 0 Nucleus 0.438717985258206 0.438708143490466 0.10974812 0 hPsi_site_21671 iPseU_CNN:0.10974812;iRNA_PseU:0 21672 chr1 156883768 156883768 1 + G A SKCM 156883767 + 156883747 156883787 41 GGAGAGCAGCTACATGGAGATGAAAGGCCCTCCCTCAGGAT GGAGAGCAGCTACATGGAGATAAAAGGCCCTCCCTCAGGAT < 41bp 0.576261999008114 0.903132555256933 0.27568698 0.53411174 prediction 0.653741112497637 Functional Gain - PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156883767 chr1:156883768 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_27948 0 0 0 0 0 cytosol 0.438718594807532 0.438718592993318 0.0682234799999999 0 hPsi_site_21672 iPseU_CNN:0.0682234799999999;iRNA_PseU:0 21673 chr1 229772119 229772119 1 + C A OV 229772118 + 229772098 229772138 41 GTGCAGCCCCTGCTGGCCCTTCTCCCGGACACCCCAGGCCC GTGCAGCCCCTGCTGGCCCTTATCCCGGACACCCCAGGCCC < 41bp 0.548491304939064 0.875360868354994 0.3360646 0.687115 prediction 0.653739126831861 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772118 chr1:229772119 nonsynonymous SNV 0.959 1 22 hPsi_associated_SNPs_27949 0 0 1 0 0 Nucleus 0.438718592995102 0.438718592995102 0.37423 0 hPsi_site_21673 iPseU_CNN:0.37423;iRNA_PseU:0 21674 chr17 46199972 46199972 1 + G A rs529504989 46199971 + 46199951 46199991 41 TGTGTGATCCTTCCCCTCCCTGTCGCCCACTCCTCCCTCCT TGTGTGATCCTTCCCCTCCCTATCGCCCACTCCTCCCTCCT < 41bp 0.493226168428869 0.826866690580531 0.20290363 0.30434692 prediction 0.653733381161061 Functional Gain - SNX11 ENSG00000002919 UTR3 Human protein_coding chr17:46199971 chr17:46199972 . . 0 22 hPsi_associated_SNPs_27950 0 0 1 0 0 Cytosol 0.438718592958417 0.438718592992067 0 0 hPsi_site_21674 iPseU_CNN:0;iRNA_PseU:0 21675 chr7 53103901 53103901 1 + G A LUSC 53103900 + 53103880 53103920 41 CTGCACCCGGGAGACTCTGCTGGGGGCGCTCAGCCAGTGCC CTGCACCCGGGAGACTCTGCTAGGGGCGCTCAGCCAGTGCC < 41bp 0.558906128385424 0.885772199520285 0.3371377 0.6367746 prediction 0.653732142269723 Functional Gain - POM121L12 ENSG00000221900 CDS Human protein_coding chr7:53103900 chr7:53103901 synonymous SNV . 0 22 hPsi_associated_SNPs_27951 0 0 0 0 0 unknown 0.438718592389627 0.438718592993379 0.2735492 0 hPsi_site_21675 iPseU_CNN:0.2735492;iRNA_PseU:0 21676 chr17 40956405 40956405 1 + C A COAD 40956404 + 40956384 40956424 41 GCTGGCCAGCAAACTTTCCTTCCGAAACAAAGTAAGGAGCT GCTGGCCAGCAAACTTTCCTTACGAAACAAAGTAAGGAGCT < 41bp 0.540677131304618 0.867541919969631 0.2885123 0.6030364 prediction 0.653729577330027 Functional Gain - CNTD1 ENSG00000176563 CDS Human protein_coding chr17:40956404 chr17:40956405 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_27952 0 0 0 0 1 Cytosol 0.438718300137362 0.438357117209746 0.2060728 0 hPsi_site_21676 iPseU_CNN:0.2060728;iRNA_PseU:0 21677 chr9 131482556 131482556 1 + C A UCEC 131482555 + 131482535 131482575 41 GGAGATCAAGGTCCAGCCATTCTTCAGGGTGAGCGGCTGGG GGAGATCAAGGTCCAGCCATTATTCAGGGTGAGCGGCTGGG < 41bp 0.52365421623865 0.850512686147583 0.59744036 0.6168381 prediction 0.653716939817865 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131482555 chr9:131482556 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_27953 0 0 1 0 1 chromatin 0.438718670338481 0.438718577865814 0.0387954799999999 0 hPsi_site_21677 iPseU_CNN:0.0387954799999999;iRNA_PseU:0 21678 chr17 4848061 4848061 1 + G A STAD 4848060 + 4848040 4848080 41 TCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCT TCACTCAGACCCGGAAGACCTACCCCATTTGCAAGCAGCCT < 41bp 0.413229616269182 0.826856809139476 0.2788419 0.68681145 prediction 0.653713618278952 Functional Gain - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4848060 chr17:4848061 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_27954 0 0 1 0 1 Ribosome 0.43871852491589 0.438717041256121 0.3736229 0 hPsi_site_21678 iPseU_CNN:0.3736229;iRNA_PseU:0 21679 chr11 64853913 64853913 1 + G A HNSC 64853912 + 64853892 64853932 41 TTTCACTGGGCCTGCCTCAATGAACGTGCTGCCCAGCTACC TTTCACTGGGCCTGCCTCAATAAACGTGCTGCCCAGCTACC < 41bp 0.407178433142377 0.826855071141421 0.313188 0.3443529 prediction 0.653710142282841 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64853912 chr11:64853913 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27955 0 0 1 0 1 Ribosome 0.438865287078412 0.438718583193122 0 0 hPsi_site_21679 iPseU_CNN:0;iRNA_PseU:0 21680 chr7 141490228 141490228 1 + G A SKCM 141490227 + 141490207 141490247 41 GAATTTCTCATCGGTTTAATTGGAAATGGAAGCCTGGTGGT GAATTTCTCATCGGTTTAATTAGAAATGGAAGCCTGGTGGT < 41bp 0.445298057060504 0.826851822660195 0.19144386 0.30420202 prediction 0.65370364532039 Functional Gain - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490227 chr7:141490228 nonsynonymous SNV 0.053 3 22 hPsi_associated_SNPs_27956 0 0 0 0 0 nucleolus 0.438718592993487 0.438718592994948 0 0 hPsi_site_21680 iPseU_CNN:0;iRNA_PseU:0 21681 chr12 85459079 85459079 1 + C A rs201542916 85459078 + 85459058 85459098 41 CAAGATTTGCCAGGCTGTGTTCTCTCCACACTGGCAGAGTG CAAGATTTGCCAGGCTGTGTTATCTCCACACTGGCAGAGTG < 41bp 0.474223965527787 0.826850325778406 0.39721796 0.6692721 prediction 0.653700651556812 Functional Gain - LRRIQ1 ENSG00000133640 CDS Human protein_coding chr12:85459078 chr12:85459079 nonsynonymous SNV 0.553 3 22 hPsi_associated_SNPs_27957 0 0 0 0 1 cytosol 0.437636352451126 0.438689255435785 0.3385442 0 hPsi_site_21681 iPseU_CNN:0.3385442;iRNA_PseU:0 21682 chr16 67289013 67289013 1 + G A SKCM 67289012 + 67288992 67289032 41 GTGGCCGTGCTAGCTGTCTTTGAGGAGGTGCACGTCAATGA GTGGCCGTGCTAGCTGTCTTTAAGGAGGTGCACGTCAATGA < 41bp 0.550542487305048 0.877391626373914 0.20991069 0.3946712 prediction 0.653698278137733 Functional Gain - SLC9A5 ENSG00000135740 CDS Human protein_coding chr16:67289012 chr16:67289013 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27958 0 0 0 0 3 Cytosol 0.439053223039054 0.438685850487385 0 0 hPsi_site_21682 iPseU_CNN:0;iRNA_PseU:0 21683 chr12 122612484 122612484 1 + C A SKCM 122612483 + 122612463 122612503 41 TTGTGACACCCCTGGACGGCTCTGTGGACGTAGACGAGCAC TTGTGACACCCCTGGACGGCTATGTGGACGTAGACGAGCAC < 41bp 0.451478837390636 0.82684891719146 0.25882906 0.50485 prediction 0.653697834382921 Functional Gain - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122612483 chr12:122612484 nonsynonymous SNV 0.709 4 22 hPsi_associated_SNPs_27959 0 0 1 0 1 chromatin 0.438433857891385 0.434742769384076 0.00970000000000004 0 hPsi_site_21683 iPseU_CNN:0.00970000000000004;iRNA_PseU:0 21684 chr19 10943724 10943724 1 + G A STAD 10943723 + 10943703 10943743 41 AGCGCTTGAGCGTGCAGACCTGCAGCACAGCCACCAGCAGC AGCGCTTGAGCGTGCAGACCTACAGCACAGCCACCAGCAGC < 41bp 0.439473266698873 0.826846635783697 0.32873493 0.65974903 prediction 0.653693271567394 Functional Gain - TMED1 ENSG00000079805;ENSG00000099203 CDS Human other chr19:10943723 chr19:10943724 stopgain 0.862 1 22 hPsi_associated_SNPs_27960 0 0 0 1 0 Ribosome 0.438734075254517 0.438643626128699 0.31949806 0 hPsi_site_21684 iPseU_CNN:0.31949806;iRNA_PseU:0 21685 chr6 2783683 2783683 1 + G A UCEC 2783682 + 2783662 2783702 41 CTCCGCCCTGCACAAGTCCATGCGGGGCTCAGACCAGAACG CTCCGCCCTGCACAAGTCCATACGGGGCTCAGACCAGAACG < 41bp 0.57640287434324 0.903247654347238 0.410137 0.7727781 prediction 0.653689560007997 Functional Gain - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2783682 chr6:2783683 nonsynonymous SNV 0.405 1 22 hPsi_associated_SNPs_27961 0 0 1 0 1 Ribosome 0.438718594565404 0.438718544212429 0.5455562 0 hPsi_site_21685 iPseU_CNN:0.5455562;iRNA_PseU:0 21686 chr20 47582450 47582450 1 + C A UCEC 47582449 + 47582429 47582469 41 CTGACAGAACCTGAGAGAGTTCTAGGTGAACTGGAGTGCCA CTGACAGAACCTGAGAGAGTTATAGGTGAACTGGAGTGCCA < 41bp 0.524501776174807 0.851344906045035 0.43618104 0.482303 prediction 0.653686259740455 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47582449 chr20:47582450 nonsynonymous SNV 0.237 0 22 hPsi_associated_SNPs_27962 0 0 1 0 1 Cytosol 0.439383559662308 0.405882132654532 0 0 hPsi_site_21686 iPseU_CNN:0;iRNA_PseU:0 21687 chr20 43547895 43547895 1 + G A STAD 43547894 + 43547874 43547914 41 TGCTTTGGCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCA TGCTTTGGCTTTGTCAACTTTAAGAAGCATGAGGAAGCCCA < 41bp 0.426356590974453 0.826830684516662 0.30341923 0.335456 prediction 0.653661369033324 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547894 chr20:43547895 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_27963 0 0 1 0 2 chromatin 0.4387157737207 0.438718644111979 0 0 hPsi_site_21687 iPseU_CNN:0;iRNA_PseU:0 21688 chr15 40660844 40660844 1 + G A HNSC 40660843 + 40660823 40660863 41 TCGTGGAGACCCTCCAGCGCTGGATGGAGAGCCCCAGCTGC TCGTGGAGACCCTCCAGCGCTAGATGGAGAGCCCCAGCTGC < 41bp 0.567040482124969 0.893870438764855 0.33769935 0.72221494 prediction 0.653659913279773 Functional Gain - DISP2 ENSG00000140323 CDS Human protein_coding chr15:40660843 chr15:40660844 stopgain 0.890 1 22 hPsi_associated_SNPs_27964 0 0 0 0 0 nucleus 0.438718592995102 0.438718592995108 0.44442988 0 hPsi_site_21688 iPseU_CNN:0.44442988;iRNA_PseU:0 21689 chr7 99817998 99817998 1 + G A HNSC 99817997 + 99817977 99818017 41 GCTCTGGGGCCAGCAGCCCCTGCGCCAACACCACCTTCTGC GCTCTGGGGCCAGCAGCCCCTACGCCAACACCACCTTCTGC < 41bp 0.405307511145908 0.826827581506468 0.1730994 0.36037204 prediction 0.653655163012937 Functional Gain - PVRIG ENSG00000213413 CDS Human protein_coding chr7:99817997 chr7:99817998 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_27965 0 0 0 0 1 exosome 0.437039780159584 0.437816331512125 0 0 hPsi_site_21689 iPseU_CNN:0;iRNA_PseU:0 21690 chr17 73486347 73486347 1 + C A GBM 73486346 + 73486326 73486366 41 CCTGCCCATCCTCCCCCTGCTCTTTCCAGTCCTCTGGGTTC CCTGCCCATCCTCCCCCTGCTATTTCCAGTCCTCTGGGTTC < 41bp 0.466434625605086 0.82682501933952 0.3424688 0.5656091 prediction 0.653650038679039 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73486346 chr17:73486347 synonymous SNV . 0 22 hPsi_associated_SNPs_27966 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592995102 0.1312182 0 hPsi_site_21690 iPseU_CNN:0.1312182;iRNA_PseU:0 21691 chr22 24226177 24226177 1 + C A UCEC 24226176 + 24226156 24226196 41 CTACCTGGCCATGGCCTGCATCTTTGCCTTCATCCTCAGCT CTACCTGGCCATGGCCTGCATATTTGCCTTCATCCTCAGCT < 41bp 0.457294555566385 0.826820645313662 0.64629084 0.56945187 prediction 0.653641290627324 Functional Gain - SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24226176 chr22:24226177 synonymous SNV . 0 22 hPsi_associated_SNPs_27967 0 0 0 5 1 nucleoplasm 0.438718583116326 0.438718508606185 0 0 hPsi_site_21691 iPseU_CNN:0;iRNA_PseU:0 21692 chr10 12199040 12199040 1 + G A UCEC 12199039 + 12199019 12199059 41 AACCTCATTGCTACAGTTTTTGTGTTTGCTGTTGTTATATA AACCTCATTGCTACAGTTTTTATGTTTGCTGTTGTTATATA < 41bp 0.568280586913375 0.89509898897161 0.3194903 0.32505506 prediction 0.653636804116469 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12199039 chr10:12199040 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27968 0 0 1 1 1 Ribosome 0.438686857858186 0.438479816530169 0 0 hPsi_site_21692 iPseU_CNN:0;iRNA_PseU:0 21693 chr11 66288771 66288771 1 + G T STAD 66288772 - 66288752 66288792 41 CATCAAACTGGCCAGAAACCTCTAGGAAGACGGGGACGCTG CATCAAACTGGCCAGAAACCTATAGGAAGACGGGGACGCTG < 41bp 0.517702585349418 0.844520359242034 0.29052174 0.3219038 prediction 0.653635547785233 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66288772 chr11:66288771 stopgain 0.990 0 22 hPsi_associated_SNPs_27969 0 0 0 1 0 membrane 0.438756753257218 0.438668997052032 0 0 hPsi_site_21693 iPseU_CNN:0;iRNA_PseU:0 21694 chr15 90784172 90784172 1 + C A PAAD 90784171 + 90784151 90784191 41 CACATGATTCAAACGAAACTTCCTATTTGCTGCCTCCCAAC CACATGATTCAAACGAAACTTACTATTTGCTGCCTCCCAAC < 41bp 0.474634636691356 0.826817665567454 0.29587838 0.32672575 prediction 0.653635331134908 Functional Gain - GDPGP1 ENSG00000183208 CDS Human protein_coding chr15:90784171 chr15:90784172 nonsynonymous SNV 0.790 1 22 hPsi_associated_SNPs_27970 0 0 1 0 1 nucleoplasm 0.438666106518292 0.438362324490209 0 0 hPsi_site_21694 iPseU_CNN:0;iRNA_PseU:0 21695 chr20 30064507 30064507 1 + G A LUAD 30064506 + 30064486 30064526 41 CTCTACCGTGTGGTGCTACTTGGAGATCCTGGAGTGGGGAA CTCTACCGTGTGGTGCTACTTAGAGATCCTGGAGTGGGGAA < 41bp 0.413616446535232 0.826814097995527 0.20573759 0.3211019 prediction 0.653628195991053 Functional Gain - REM1 ENSG00000088320 CDS Human protein_coding chr20:30064506 chr20:30064507 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_27971 0 0 0 0 1 exosome 0.438718569661592 0.438760683402444 0 0 hPsi_site_21695 iPseU_CNN:0;iRNA_PseU:0 21696 chr3 49452917 49452917 1 + C A rs112796509 49452916 + 49452896 49452936 41 CCAAGATTGCGCCGTTGTACTCCAGCCTGGGCAACAGAGCA CCAAGATTGCGCCGTTGTACTACAGCCTGGGCAACAGAGCA < 41bp 0.50487798669519 0.831678879433571 0.43956652 0.81529796 prediction 0.653601785476763 Functional Gain - TCTA ENSG00000145022 UTR3 Human protein_coding chr3:49452916 chr3:49452917 . . 0 22 hPsi_associated_SNPs_27972 0 0 1 0 0 Ribosome 0.438718592994954 0.438717721279867 0.63059592 0 hPsi_site_21696 iPseU_CNN:0.63059592;iRNA_PseU:0 21697 chr7 5330418 5330418 1 + G A ESCA 5330417 + 5330397 5330437 41 CGCCATCTACTTTGCGATGCTGCTGGCTGGCGTGGGCTTCC CGCCATCTACTTTGCGATGCTACTGGCTGGCGTGGGCTTCC < 41bp 0.406202072262665 0.826800383542816 0.18143198 0.34980473 prediction 0.653600767085632 Functional Gain - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5330417 chr7:5330418 synonymous SNV . 0 22 hPsi_associated_SNPs_27973 0 0 0 9 2 Endoplasmic reticulum 0.438733856739057 0.438729167653672 0 0 hPsi_site_21697 iPseU_CNN:0;iRNA_PseU:0 21698 chr9 5534950 5534950 1 + C A STAD 5534949 + 5534929 5534969 41 GCCCCTAGGGAAGGCCTCGTTCCACATACCTCAAGTCCAAG GCCCCTAGGGAAGGCCTCGTTACACATACCTCAAGTCCAAG < 41bp 0.544839095183277 0.871636003370375 0.52895856 0.90264595 prediction 0.653593816374196 Functional Gain - PDCD1LG2 ENSG00000197646 CDS Human protein_coding chr9:5534949 chr9:5534950 nonsynonymous SNV 0.986 1 22 hPsi_associated_SNPs_27974 0 0 0 0 0 exosome 0.438718588660843 0.438717072700466 0.74737478 0 hPsi_site_21698 iPseU_CNN:0.74737478;iRNA_PseU:0 21699 chr12 29614829 29614829 1 + G T LUAD 29614830 - 29614810 29614850 41 AGGGATCACAGAGAAGATGATCTGTGCTGGCTTTGCAGCAT AGGGATCACAGAGAAGATGATATGTGCTGGCTTTGCAGCAT < 41bp 0.533437344257896 0.860229680692691 0.58533806 0.5456811 prediction 0.653584672869589 Functional Gain - OVCH1 ENSG00000187950;ENSG00000257599 CDS Human other chr12:29614830 chr12:29614829 synonymous SNV . 0 22 hPsi_associated_SNPs_27975 0 0 0 0 1 exosome 0.438713574903232 0.437316868869575 0 0 hPsi_site_21699 iPseU_CNN:0;iRNA_PseU:0 21700 chr6 37138953 37138953 1 + C A DLBC 37138952 + 37138932 37138972 41 TCCTGCTGAAGAAGGTGAGCTCGGGTTTCTCCGGCGTCATT TCCTGCTGAAGAAGGTGAGCTAGGGTTTCTCCGGCGTCATT < 41bp 0.532113423538005 0.85889725998805 0.23868123 0.45029393 prediction 0.653567672900091 Functional Gain - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37138952 chr6:37138953 stopgain 0.999 0 22 hPsi_associated_SNPs_27976 0 0 1 0 1 Cytosol 0.438707612816133 0.438724409237039 0 0 hPsi_site_21700 iPseU_CNN:0;iRNA_PseU:0 21701 chr1 159175684 159175684 1 + C A rs147620003 159175683 + 159175663 159175703 41 TGCTGCTAGGGTGCCATGCCTCCCTGGGCCACAGACTGGGT TGCTGCTAGGGTGCCATGCCTACCTGGGCCACAGACTGGGT < 41bp 0.541800721394459 0.86857937927571 0.2078636 0.46348333 prediction 0.653557315762502 Functional Gain - ACKR1 ENSG00000213088 CDS Human protein_coding chr1:159175683 chr1:159175684 nonsynonymous SNV 0.186 2 22 hPsi_associated_SNPs_27977 0 0 0 0 0 Endoplasmic reticulum 0.438687253270459 0.438859832709296 0 0 hPsi_site_21701 iPseU_CNN:0;iRNA_PseU:0 21702 chr5 68414372 68414372 1 + C A UCEC 68414371 + 68414351 68414391 41 GGATTTATTAATGGACTTTTTCTAATAGTAATAGCGTTTTT GGATTTATTAATGGACTTTTTATAATAGTAATAGCGTTTTT < 41bp 0.520064365820489 0.846840191686426 0.19077611 0.13608286 prediction 0.653551651731875 Functional Gain - SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68414371 chr5:68414372 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_27978 0 0 1 0 2 Ribosome 0.438718594885908 0.438718591408597 0 0 hPsi_site_21702 iPseU_CNN:0;iRNA_PseU:0 21703 chr6 40347070 40347070 1 + C A UCEC 40347069 + 40347049 40347089 41 AATGAAGAGGAGGGAGGCAGTCTGCGCGCACCGCCATTTTC AATGAAGAGGAGGGAGGCAGTATGCGCGCACCGCCATTTTC < 41bp 0.503777118266303 0.830550364705739 0.31781167 0.72266924 prediction 0.653546492878872 Functional Gain - TDRG1 ENSG00000204091 ncRNA_exonic Human antisense chr6:40347069 chr6:40347070 . . 0 22 hPsi_associated_SNPs_27979 0 0 0 0 1 unknown 0.438711547887735 0.438688291204051 0.44533848 0 hPsi_site_21703 iPseU_CNN:0.44533848;iRNA_PseU:0 21704 chr19 15793273 15793273 1 + G A SKCM 15793272 + 15793252 15793292 41 GCACATCAGCCTCATGACCTTGGACAGTCTACAGAAATGCA GCACATCAGCCTCATGACCTTAGACAGTCTACAGAAATGCA < 41bp 0.405533604271097 0.826767168892136 0.20012215 0.32769868 prediction 0.653534337784273 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15793272 chr19:15793273 synonymous SNV . 0 22 hPsi_associated_SNPs_27980 0 0 1 0 2 exosome 0.436866393110857 0.443830557839907 0 0 hPsi_site_21704 iPseU_CNN:0;iRNA_PseU:0 21705 chrX 15564933 15564933 1 + C A UCEC 15564932 + 15564912 15564952 41 GTTTTCCCTGGCAGGTATGTTCTTGATGACCAGTATGTCAG GTTTTCCCTGGCAGGTATGTTATTGATGACCAGTATGTCAG < 41bp 0.463624778633639 0.826763618111667 0.2833128 0.3197513 prediction 0.653527236223334 Functional Gain - BMX ENSG00000102010 CDS Human protein_coding chrX:15564932 chrX:15564933 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_27981 0 0 0 0 1 cytosol 0.438715863276064 0.439906925997781 0 0 hPsi_site_21705 iPseU_CNN:0;iRNA_PseU:0 21706 chr17 73517538 73517538 1 + G T LUSC 73517537 + 73517517 73517557 41 GCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGATGGAG GCTTAACCTGGATGCCAGCGTTCAGCACTTGGAGGATGGAG < 41bp 0.500248727689279 0.827012017180704 0.3629005 0.48204726 prediction 0.65352657898285 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517537 chr17:73517538 synonymous SNV . 0 22 hPsi_associated_SNPs_27982 0 0 1 12 2 Cytosol 0.438718955104059 0.438723315176497 0 0 hPsi_site_21706 iPseU_CNN:0;iRNA_PseU:0 21707 chr4 57389895 57389895 1 + C A UCEC 57389894 + 57389874 57389914 41 AGCCTATCACATTACAGATATCCATGAAGCTTTGGCATTAT AGCCTATCACATTACAGATATACATGAAGCTTTGGCATTAT < 41bp 0.530056446648958 0.856816364373261 0.29168484 0.35955393 prediction 0.653519835448606 Functional Gain - ARL9 ENSG00000196503 CDS Human protein_coding chr4:57389894 chr4:57389895 synonymous SNV . 0 22 hPsi_associated_SNPs_27983 0 0 0 0 1 exosome 0.438718592943975 0.438718973832283 0 0 hPsi_site_21707 iPseU_CNN:0;iRNA_PseU:0 21708 chr5 76709055 76709055 1 + C A UCEC 76709054 + 76709034 76709074 41 TCGAAGCCAACTACCACTCTTCCAATGCCTACCACAACTCC TCGAAGCCAACTACCACTCTTACAATGCCTACCACAACTCC < 41bp 0.544359895788177 0.871116728343774 0.5919695 0.8530705 prediction 0.653513665111193 Functional Gain - PDE8B ENSG00000113231 CDS Human protein_coding chr5:76709054 chr5:76709055 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_27984 0 0 0 0 1 Nucleus 0.438718592995102 0.438718594369883 0.522202 0 hPsi_site_21708 iPseU_CNN:0.522202;iRNA_PseU:0 21709 chr2 235962340 235962340 1 + G A BLCA 235962339 + 235962319 235962359 41 GCACCTGGGCCTGGACAAGATGAAAAACCCCATCACCAAGC GCACCTGGGCCTGGACAAGATAAAAAACCCCATCACCAAGC < 41bp 0.567441561565012 0.894196665815104 0.297764 0.56653684 prediction 0.653510208500185 Functional Gain - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235962339 chr2:235962340 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27985 0 0 1 0 0 cytosol 0.438718593025333 0.438718592995102 0.13307368 0 hPsi_site_21709 iPseU_CNN:0.13307368;iRNA_PseU:0 21710 chr13 41639360 41639360 1 + G T COAD 41639359 + 41639339 41639379 41 AAGGCATCAAAGGAGTTTGCTGCAATGGAGGCAGCTGCCCT AAGGCATCAAAGGAGTTTGCTTCAATGGAGGCAGCTGCCCT < 41bp 0.507341808585381 0.83409375961078 0.37214994 0.5735798 prediction 0.653503902050798 Functional Gain - WBP4 ENSG00000120688 CDS Human protein_coding chr13:41639359 chr13:41639360 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27986 0 0 1 0 2 Cytosol 0.438720061174017 0.438718754693587 0.1471596 0 hPsi_site_21710 iPseU_CNN:0.1471596;iRNA_PseU:0 21711 chr20 30898654 30898654 1 + C A BLCA 30898653 + 30898633 30898673 41 GGATGCCCTCCTTCGAGAATTCCAGGAAGAGATTGCTCGGC GGATGCCCTCCTTCGAGAATTACAGGAAGAGATTGCTCGGC < 41bp 0.545648417703719 0.872400292852993 0.2847469 0.43373457 prediction 0.653503750298548 Functional Gain - KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898653 chr20:30898654 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27987 0 0 1 0 1 Ribosome 0.438723177963242 0.438717331488493 0 0 hPsi_site_21711 iPseU_CNN:0;iRNA_PseU:0 21712 chr1 16378890 16378890 1 + C A UCEC 16378889 + 16378869 16378909 41 CTGCCATACCTGCCACGGATTCTGGGCCGCAACATCGGGTG CTGCCATACCTGCCACGGATTATGGGCCGCAACATCGGGTG < 41bp 0.536196156386096 0.862946897407845 0.21546084 0.27277088 prediction 0.653501482043498 Functional Gain - CLCNKB ENSG00000184908 CDS Human protein_coding chr1:16378889 chr1:16378890 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_27988 0 0 0 0 1 exosome 0.438718574751812 0.438718775547945 0 0 hPsi_site_21712 iPseU_CNN:0;iRNA_PseU:0 21713 chr1 154303574 154303574 1 + G A SKCM 154303573 + 154303553 154303593 41 GTTCACCACCATTGTGCCTTTGGTTCTTGTCCTCACCATCA GTTCACCACCATTGTGCCTTTAGTTCTTGTCCTCACCATCA < 41bp 0.410601544968473 0.826748240872081 0.22266299 0.6623125 prediction 0.653496481744162 Functional Gain - ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154303573 chr1:154303574 synonymous SNV . 0 22 hPsi_associated_SNPs_27989 0 0 1 0 2 chromatin 0.438649246360723 0.438718592967886 0.324625 0 hPsi_site_21713 iPseU_CNN:0.324625;iRNA_PseU:0 21714 chr1 196887480 196887480 1 + C A rs80010185 196887479 + 196887459 196887499 41 TATAATGCGAATACATCAGTTCTATCATTTCAAGCAGTGTG TATAATGCGAATACATCAGTTATATCATTTCAAGCAGTGTG < 41bp 0.49578432632442 0.826747029733868 0.708236 0.73453516 prediction 0.653494059467736 Functional Gain - CFHR4 ENSG00000134365 CDS Human protein_coding chr1:196887479 chr1:196887480 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_27990 0 0 0 0 0 cytosol 0.436193085221347 0.434708727906963 0.05259832 0 hPsi_site_21714 iPseU_CNN:0.05259832;iRNA_PseU:0 21715 chr2 202050731 202050731 1 + C A LUAD 202050730 + 202050710 202050750 41 GCTGAGTGAGGAAGACCCTTTCTTCCTGGCAGAACTCCTCT GCTGAGTGAGGAAGACCCTTTATTCCTGGCAGAACTCCTCT < 41bp 0.45754525056992 0.826743252901002 0.2978918 0.63488865 prediction 0.653486505802004 Functional Gain - CASP10 ENSG00000003400 CDS Human protein_coding chr2:202050730 chr2:202050731 nonsynonymous SNV 0.326 3 22 hPsi_associated_SNPs_27991 0 0 1 0 0 Nucleus 0.438709664628071 0.438699356968507 0.2697773 0 hPsi_site_21715 iPseU_CNN:0.2697773;iRNA_PseU:0 21716 chr19 49090676 49090676 1 + C A UCEC 49090675 + 49090655 49090695 41 CCAGATCTTCACCAAGGCCTTCTTCAGCTCCAAGGCCAAGG CCAGATCTTCACCAAGGCCTTATTCAGCTCCAAGGCCAAGG < 41bp 0.460608292991466 0.826742245448684 0.37807038 0.59230506 prediction 0.653484490897368 Functional Gain - SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49090675 chr19:49090676 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_27992 0 0 0 0 1 exosome 0.438718592995101 0.438718593732781 0.18461012 0 hPsi_site_21716 iPseU_CNN:0.18461012;iRNA_PseU:0 21717 chr9 125140252 125140252 1 + G T LUAD 125140251 + 125140231 125140271 41 GGCCTTGACCGCTACCAGTGTGACTGCACCCGCACGGGCTA GGCCTTGACCGCTACCAGTGTTACTGCACCCGCACGGGCTA < 41bp 0.504771276761552 0.831508896307257 0.5631857 0.80843055 prediction 0.653475239091409 Functional Gain - PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125140251 chr9:125140252 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_27993 0 0 0 0 3 nucleolus 0.438718592995107 0.43871859313989 0.4904897 0 hPsi_site_21717 iPseU_CNN:0.4904897;iRNA_PseU:0 21718 chr19 56544019 56544019 1 + C A UCEC 56544018 + 56543998 56544038 41 TGAGGAGCAGTGGGAAGATTTCTGCTCCATGCTTGGCACCC TGAGGAGCAGTGGGAAGATTTATGCTCCATGCTTGGCACCC < 41bp 0.545259861246077 0.871991539133457 0.37148213 0.6624311 prediction 0.65346335577476 Functional Gain - NLRP5 ENSG00000171487 CDS Human protein_coding chr19:56544018 chr19:56544019 nonsynonymous SNV 0.037 0 22 hPsi_associated_SNPs_27994 0 0 0 0 1 unknown 0.440176965657287 0.438859484220274 0.3248622 0 hPsi_site_21718 iPseU_CNN:0.3248622;iRNA_PseU:0 21719 chr6 52052480 52052480 1 + C A COAD 52052479 + 52052459 52052499 41 GAAATCCAGGATGCCCAAATTCTGAGGACAAGAACTTCCCC GAAATCCAGGATGCCCAAATTATGAGGACAAGAACTTCCCC < 41bp 0.533363819858918 0.860089325609886 0.6604816 0.76610833 prediction 0.653451011501937 Functional Gain - IL17A ENSG00000112115 CDS Human protein_coding chr6:52052479 chr6:52052480 nonsynonymous SNV 0.919 0 22 hPsi_associated_SNPs_27995 0 0 0 0 1 unknown 0.438718592993527 0.438718592999792 0.21125346 0 hPsi_site_21719 iPseU_CNN:0.21125346;iRNA_PseU:0 21720 chr5 43650630 43650630 1 + C A BLCA 43650629 + 43650609 43650649 41 TGGGAGGACATTTGTATCCTTCCACAACTTCTCAGGGCCTT TGGGAGGACATTTGTATCCTTACACAACTTCTCAGGGCCTT < 41bp 0.5440645688439 0.870789080113938 0.35675222 0.8138911 prediction 0.653449022540077 Functional Gain - NNT ENSG00000112992 CDS Human protein_coding chr5:43650629 chr5:43650630 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_27996 0 0 1 0 2 Endoplasmic reticulum 0.438718592995139 0.438718596424881 0.6277822 0 hPsi_site_21720 iPseU_CNN:0.6277822;iRNA_PseU:0 21721 chrX 78011361 78011361 1 + C A LUAD 78011360 + 78011340 78011380 41 ATGCCCACATCAGAATGGAGTCCCTGTTTAAGACTGAAACA ATGCCCACATCAGAATGGAGTACCTGTTTAAGACTGAAACA < 41bp 0.474122610552835 0.826721681110987 0.14468345 0.33878317 prediction 0.653443362221975 Functional Gain - LPAR4 ENSG00000147145 CDS Human protein_coding chrX:78011360 chrX:78011361 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_27997 0 0 0 0 0 exosome 0.438718619751985 0.438720200436796 0 0 hPsi_site_21721 iPseU_CNN:0;iRNA_PseU:0 21722 chr14 102891482 102891482 1 + G A SKCM 102891481 + 102891461 102891501 41 GCCGGGGGAGTCAAGCCTTTTGAACTGCACCCGCGTCTGGA GCCGGGGGAGTCAAGCCTTTTAAACTGCACCCGCGTCTGGA < 41bp 0.400727838219168 0.826720465580979 0.56089365 0.79571605 prediction 0.653440931161959 Functional Gain - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102891481 chr14:102891482 nonsynonymous SNV 0.948 4 22 hPsi_associated_SNPs_27998 0 0 0 0 0 Cytosol 0.438711697174126 0.438725750777778 0.4696448 0 hPsi_site_21722 iPseU_CNN:0.4696448;iRNA_PseU:0 21723 chr4 53731759 53731759 1 + C A LUAD 53731758 + 53731738 53731778 41 CAGCATGCTAGGCTGCTCATTCTATGAAGTGTCTGTCAGTG CAGCATGCTAGGCTGCTCATTATATGAAGTGTCTGTCAGTG < 41bp 0.516695312733493 0.8434150430762 0.34968853 0.4343817 prediction 0.653439460685413 Functional Gain - RASL11B ENSG00000128045 CDS Human protein_coding chr4:53731758 chr4:53731759 nonsynonymous SNV 0.672 5 22 hPsi_associated_SNPs_27999 0 0 0 0 0 exosome 0.438708103433689 0.439031106410743 0 0 hPsi_site_21723 iPseU_CNN:0;iRNA_PseU:0 21724 chr11 68675711 68675711 1 + G A ESCA 68675710 + 68675690 68675730 41 AAGTCGGTCACGGTGGCCTTTGATGAGTCCCACGATTTCCA AAGTCGGTCACGGTGGCCTTTAATGAGTCCCACGATTTCCA < 41bp 0.398895702759801 0.826719586480266 0.2076796 0.35099494 prediction 0.653439172960532 Functional Gain - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68675710 chr11:68675711 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_28000 0 0 1 0 2 chromatin 0.436792198671257 0.438718717556407 0 0 hPsi_site_21724 iPseU_CNN:0;iRNA_PseU:0 21725 chr7 31117678 31117678 1 + G T SARC 31117677 + 31117657 31117697 41 GTGAGATGGTCCTGGTCAGCTGCCCTGAGCTCTTCCGAATC GTGAGATGGTCCTGGTCAGCTTCCCTGAGCTCTTCCGAATC < 41bp 0.502640685888068 0.829358592243675 0.28283906 0.64704555 prediction 0.653435812711213 Functional Gain - ADCYAP1R1 ENSG00000078549 CDS Human protein_coding chr7:31117677 chr7:31117678 nonsynonymous SNV 0.989 5 22 hPsi_associated_SNPs_28001 0 0 0 0 2 exosome 0.438133239848554 0.438657168467181 0.2940911 0 hPsi_site_21725 iPseU_CNN:0.2940911;iRNA_PseU:0 21726 chr19 17972164 17972164 1 + C A STAD 17972163 + 17972143 17972183 41 CAAATGCCACACGCCGCCCCTCTACCGCATGCGAATCTTTG CAAATGCCACACGCCGCCCCTATACCGCATGCGAATCTTTG < 41bp 0.471963878852662 0.826715967681788 0.33108065 0.39147326 prediction 0.653431935363576 Functional Gain - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17972163 chr19:17972164 synonymous SNV . 0 22 hPsi_associated_SNPs_28002 0 0 0 0 1 Cytosol 0.43871859611698 0.438725991803144 0 0 hPsi_site_21726 iPseU_CNN:0;iRNA_PseU:0 21727 chr3 184025484 184025484 1 + G A HNSC 184025483 + 184025463 184025503 41 CCCAAACAACCTCTTCATGGTGCGCTTGGCACAGGTAAAGA CCCAAACAACCTCTTCATGGTACGCTTGGCACAGGTAAAGA < 41bp 0.407206547576818 0.826713186991823 0.30747598 0.9340773 prediction 0.653426373983646 Functional Gain - PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184025483 chr3:184025484 synonymous SNV . 0 22 hPsi_associated_SNPs_28003 0 0 1 0 2 Ribosome 0.438716777787974 0.438707914701943 0.8681546 0 hPsi_site_21727 iPseU_CNN:0.8681546;iRNA_PseU:0 21728 chr17 40004191 40004191 1 + G A UCEC 40004190 + 40004170 40004210 41 TTTTGCTATCCACAGGTAGGTGGCTTTGATGGAGCTAATCG TTTTGCTATCCACAGGTAGGTAGCTTTGATGGAGCTAATCG < 41bp 0.430757231112018 0.826711772791438 0.14652804 0.3065775 prediction 0.653423545582875 Functional Gain - KLHL10 ENSG00000161594 CDS Human protein_coding chr17:40004190 chr17:40004191 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_28004 0 0 0 0 1 exosome 0.43871859300209 0.43870918054514 0 0 hPsi_site_21728 iPseU_CNN:0;iRNA_PseU:0 21729 chr3 10219567 10219567 1 + C A rs11465864 10219566 + 10219546 10219586 41 CCCAGCTGCGGAAGATCAAGTCCATGGAGCGGGTGCAGGGT CCCAGCTGCGGAAGATCAAGTACATGGAGCGGGTGCAGGGT < 41bp 0.455965661144541 0.82670953889127 0.1306046 0.34461164 prediction 0.653419077782541 Functional Gain - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10219566 chr3:10219567 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28005 0 0 1 0 1 Nucleus 0.438719238240797 0.438964057591757 0 0 hPsi_site_21729 iPseU_CNN:0;iRNA_PseU:0 21730 chr1 236917337 236917337 1 + G A STAD 236917336 + 236917316 236917356 41 CGTCTGAGGCGCCAGTTTGCTGCCCAAGCCAATGCCATTGG CGTCTGAGGCGCCAGTTTGCTACCCAAGCCAATGCCATTGG < 41bp 0.405922044680725 0.826708527233133 0.35663474 0.8221253 prediction 0.653417054466266 Functional Gain - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236917336 chr1:236917337 nonsynonymous SNV 0.906 1 22 hPsi_associated_SNPs_28006 3 0 0 0 2 chromatin 0.438718257425221 0.438707862929812 0.6442506 0 hPsi_site_21730 iPseU_CNN:0.6442506;iRNA_PseU:0 21731 chr14 21250155 21250155 1 + C A CESC 21250154 + 21250134 21250174 41 CCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAGAC CCACCAGAGCTCAAAGCCTGTAAACATGACTGACTGCAGAC < 41bp 0.463816625806199 0.826703020982148 0.13174722 0.19906622 prediction 0.653406041964297 Functional Gain - RNASE6 ENSG00000169413 CDS Human protein_coding chr14:21250154 chr14:21250155 synonymous SNV . 0 22 hPsi_associated_SNPs_28007 0 0 0 0 0 Endoplasmic reticulum 0.438798018056621 0.438722678805712 0 0 hPsi_site_21731 iPseU_CNN:0;iRNA_PseU:0 21732 chr22 24439417 24439417 1 + G A UCEC 24439416 + 24439396 24439436 41 CTCTGGTATAAGATTGGACATGTGGCCCTGAGGCTCATCCG CTCTGGTATAAGATTGGACATATGGCCCTGAGGCTCATCCG < 41bp 0.416025382164354 0.826700389442786 0.23485866 0.2298164 prediction 0.653400778885573 Functional Gain - CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24439416 chr22:24439417 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_28008 0 0 1 0 1 Cytosol 0.438718593021039 0.438718593026285 0 0 hPsi_site_21732 iPseU_CNN:0;iRNA_PseU:0 21733 chr1 9781634 9781634 1 + C A UCEC 9781633 + 9781613 9781653 41 CAAGATCGGCCACTTCCTTTTCTGGCACCTCCGGTAGCGGG CAAGATCGGCCACTTCCTTTTATGGCACCTCCGGTAGCGGG < 41bp 0.447697526808099 0.826699236189814 0.82229966 0.85692513 prediction 0.653398472379628 Functional Gain - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9781633 chr1:9781634 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28009 0 0 0 0 1 Nucleus 0.438718591735107 0.438718751765393 0.0692509400000001 0 hPsi_site_21733 iPseU_CNN:0.0692509400000001;iRNA_PseU:0 21734 chr22 44328950 44328950 1 + G A rs115531341 44328949 + 44328929 44328969 41 TACCTTCTCTCGAGAGCTTTTGTCCCCCCGGATCTCAAGGT TACCTTCTCTCGAGAGCTTTTATCCCCCCGGATCTCAAGGT < 41bp 0.403149146820107 0.826698876008364 0.3230276 0.581583 prediction 0.653397752016728 Functional Gain - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44328949 chr22:44328950 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28010 0 0 1 0 1 cytosol 0.43871859353018 0.43871859285341 0.163166 0 hPsi_site_21734 iPseU_CNN:0.163166;iRNA_PseU:0 21735 chr11 57983083 57983083 1 + C A LUSC 57983082 + 57983062 57983102 41 CACTGATAAGATTGGTGCTGTCCTATTCACTGTGGTGACAC CACTGATAAGATTGGTGCTGTACTATTCACTGTGGTGACAC < 41bp 0.514486007584556 0.841182235833094 0.3131913 0.8099048 prediction 0.653392456497077 Functional Gain - OR1S1 ENSG00000172774 CDS Human other chr11:57983082 chr11:57983083 synonymous SNV . 0 22 hPsi_associated_SNPs_28011 0 0 0 0 0 unknown 0.438701712103292 0.434976658744439 0.6198096 0 hPsi_site_21735 iPseU_CNN:0.6198096;iRNA_PseU:0 21736 chr22 41923906 41923906 1 + G T LGG 41923907 - 41923887 41923927 41 GCCCTGTTTCTTCAGGTTGGTCTCTGGAAAGCAGGCGGCAT GCCCTGTTTCTTCAGGTTGGTATCTGGAAAGCAGGCGGCAT < 41bp 0.472304149907236 0.826692978681463 0.3352515 0.7830962 prediction 0.653385957362926 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923907 chr22:41923906 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_28012 0 0 1 0 0 chromatin 0.438718592813157 0.438718592995107 0.5661924 0 hPsi_site_21736 iPseU_CNN:0.5661924;iRNA_PseU:0 21737 chr3 43743969 43743969 1 + G A LUAD 43743968 + 43743948 43743988 41 AGAAGTGGAGAATCAGTTTGTGGAATCCATTGAAGAGTGGA AGAAGTGGAGAATCAGTTTGTAGAATCCATTGAAGAGTGGA < 41bp 0.425770123873364 0.826687376345469 0.31472796 0.4657046 prediction 0.653374752690937 Functional Gain - ABHD5 ENSG00000011198 CDS Human protein_coding chr3:43743968 chr3:43743969 synonymous SNV . 0 22 hPsi_associated_SNPs_28013 0 0 1 0 0 Ribosome 0.438718585814958 0.438718590979671 0 0 hPsi_site_21737 iPseU_CNN:0;iRNA_PseU:0 21738 chr21 43716401 43716401 1 + G A UCEC 43716400 + 43716380 43716420 41 CGGGAGCTGGACGTGGAAAATGCCAAGCTGTACCTGGACTT CGGGAGCTGGACGTGGAAAATACCAAGCTGTACCTGGACTT < 41bp 0.425714705203482 0.82668225697108 0.45137486 0.81450295 prediction 0.65336451394216 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43716400 chr21:43716401 nonsynonymous SNV 0.826 3 22 hPsi_associated_SNPs_28014 0 0 0 0 0 Cytosol 0.438718588952844 0.438718573559827 0.6290059 0 hPsi_site_21738 iPseU_CNN:0.6290059;iRNA_PseU:0 21739 chr6 116833024 116833024 1 + C A UCEC 116833023 + 116833003 116833043 41 GACCTATGGGCTGGTTTTCCTCTTTGCTCCTGCCTGGGTGT GACCTATGGGCTGGTTTTCCTATTTGCTCCTGCCTGGGTGT < 41bp 0.472323002701679 0.826681062540853 0.20634183 0.27819893 prediction 0.653362125081706 Functional Gain - FAM26E ENSG00000178033 CDS Human protein_coding chr6:116833023 chr6:116833024 synonymous SNV . 0 22 hPsi_associated_SNPs_28015 0 0 0 0 0 exosome 0.438718592987333 0.438718592971676 0 0 hPsi_site_21739 iPseU_CNN:0;iRNA_PseU:0 21740 chrX 99919901 99919901 1 + C A UCEC 99919900 + 99919880 99919920 41 GGAAGGTGATCGCAGCCGAATCTGCATGGAAGATGGGAGAT GGAAGGTGATCGCAGCCGAATATGCATGGAAGATGGGAGAT < 41bp 0.460290504600949 0.826677434103319 0.24184683 0.28854334 prediction 0.653354868206638 Functional Gain - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99919900 chrX:99919901 synonymous SNV . 0 22 hPsi_associated_SNPs_28016 0 0 0 0 1 nucleus 0.438718615266504 0.438718592993051 0 0 hPsi_site_21740 iPseU_CNN:0;iRNA_PseU:0 21741 chr8 128428985 128428985 1 + G A UCEC 128428984 + 128428964 128429004 41 AAGCGATCAAGCAGCGACTATGCACAACGAGAGGATTTTGA AAGCGATCAAGCAGCGACTATACACAACGAGAGGATTTTGA < 41bp 0.423308714770928 0.826668211093879 0.4200681 0.7335847 prediction 0.653336422187759 Functional Gain - POU5F1B ENSG00000212993 CDS Human protein_coding chr8:128428984 chr8:128428985 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_28017 0 0 0 0 0 exosome 0.43871855193019 0.43871815040404 0.4671694 0 hPsi_site_21741 iPseU_CNN:0.4671694;iRNA_PseU:0 21742 chr8 22022951 22022951 1 + C A rs372332678 22022950 + 22022930 22022970 41 GGCCCGCCTGCCGCTGCTGCTCGGGCTGCTGCTGCTCCCGC GGCCCGCCTGCCGCTGCTGCTAGGGCTGCTGCTGCTCCCGC < 41bp 0.518773776404749 0.845441890586803 0.4522278 0.8455664 prediction 0.653336228364108 Functional Gain - BMP1 ENSG00000168487 CDS Human protein_coding chr8:22022950 chr8:22022951 synonymous SNV . 0 22 hPsi_associated_SNPs_28018 0 0 1 0 0 Endoplasmic reticulum 0.438589503238284 0.438704126259495 0.6911328 0 hPsi_site_21742 iPseU_CNN:0.6911328;iRNA_PseU:0 21743 chr12 55846846 55846846 1 + G A SKCM 55846845 + 55846825 55846865 41 TACTTCTGTCGCACCCTTGTTGAACCCCTTCATTTACACCT TACTTCTGTCGCACCCTTGTTAAACCCCTTCATTTACACCT < 41bp 0.554595141259519 0.881262488544583 0.36991706 0.8026484 prediction 0.653334694570129 Functional Gain - OR6C2 ENSG00000179695 CDS Human protein_coding chr12:55846845 chr12:55846846 synonymous SNV . 0 22 hPsi_associated_SNPs_28019 0 0 0 0 0 unknown 0.438718589156084 0.43871852756814 0.6052968 0 hPsi_site_21743 iPseU_CNN:0.6052968;iRNA_PseU:0 21744 chr3 113804558 113804558 1 + C A BLCA 113804557 + 113804537 113804577 41 ACCCGCTGGTGAGAGGATGTTCCTGTTACTGCTGTAAGAAT ACCCGCTGGTGAGAGGATGTTACTGTTACTGCTGTAAGAAT < 41bp 0.476013516896863 0.826665160822633 0.2109074 0.411298 prediction 0.653330321645266 Functional Gain - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113804557 chr3:113804558 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28020 0 0 1 0 1 Nucleus 0.438720529892375 0.438210658240259 0 0 hPsi_site_21744 iPseU_CNN:0;iRNA_PseU:0 21745 chr2 219562596 219562596 1 + C A UCEC 219562595 + 219562575 219562615 41 AGGCCTCATGGGTCTGAGTTTCTCCCTGTCGTGGTGCTCTC AGGCCTCATGGGTCTGAGTTTATCCCTGTCGTGGTGCTCTC < 41bp 0.548390544545176 0.875053365649322 0.4941541 0.57843745 prediction 0.653325642208292 Functional Gain - STK36 ENSG00000163482 CDS Human protein_coding chr2:219562595 chr2:219562596 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28021 0 0 1 0 1 chromatin 0.439829640481496 0.43856228073737 0.1568749 0 hPsi_site_21745 iPseU_CNN:0.1568749;iRNA_PseU:0 21746 chrX 51075886 51075886 1 + G A LUAD 51075885 + 51075865 51075905 41 CAAGAAGCGGGCGGCGTGCCTGTGCTTCCGGAGCGAGCGCG CAAGAAGCGGGCGGCGTGCCTATGCTTCCGGAGCGAGCGCG < 41bp 0.412384183729992 0.826661353381122 0.29335344 0.32771218 prediction 0.653322706762244 Functional Gain - NUDT10 ENSG00000122824 CDS Human protein_coding chrX:51075885 chrX:51075886 synonymous SNV . 0 22 hPsi_associated_SNPs_28022 0 0 0 0 0 exosome 0.438694642482044 0.438759858244832 0 0 hPsi_site_21746 iPseU_CNN:0;iRNA_PseU:0 21747 chr5 180432632 180432632 1 + G A UCEC 180432631 + 180432611 180432651 41 CAGACTGACAACAGAACATTTGTATTTCACATTCAATCCCC CAGACTGACAACAGAACATTTATATTTCACATTCAATCCCC < 41bp 0.442948202733007 0.826660512608091 0.32674462 0.3466633 prediction 0.653321025216182 Functional Gain - BTNL3 ENSG00000168903 CDS Human protein_coding chr5:180432631 chr5:180432632 synonymous SNV . 0 22 hPsi_associated_SNPs_28023 0 0 0 0 0 nucleus 0.438537334948718 0.438712657765572 0 0 hPsi_site_21747 iPseU_CNN:0;iRNA_PseU:0 21748 chr17 48674275 48674275 1 + G A SKCM 48674274 + 48674254 48674294 41 GCCTGGGGCGGCCCACGAGATGAAGTCACCGGTAGGGGGTG GCCTGGGGCGGCCCACGAGATAAAGTCACCGGTAGGGGGTG < 41bp 0.530794189107681 0.85745289703337 0.22373706 0.33932996 prediction 0.653317415851377 Functional Gain - CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48674274 chr17:48674275 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_28024 0 0 0 0 1 exosome 0.438620435890678 0.438700549120963 0 0 hPsi_site_21748 iPseU_CNN:0;iRNA_PseU:0 21749 chr11 6631801 6631801 1 + G A OV 6631800 + 6631780 6631820 41 CCTGCAAAGCGACCCAAATTTGACATGATTGTGCCTATCCT CCTGCAAAGCGACCCAAATTTAACATGATTGTGCCTATCCT < 41bp 0.564601760643112 0.891252395079943 0.29121158 0.3107514 prediction 0.653301268873662 Functional Gain - ILK ENSG00000166333 CDS Human protein_coding chr11:6631800 chr11:6631801 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28025 0 0 1 0 0 Endoplasmic reticulum 0.438718721491761 0.438695086935843 0 0 hPsi_site_21749 iPseU_CNN:0;iRNA_PseU:0 21750 chr1 104114315 104114315 1 + C A rs12128421 104114314 + 104114294 104114334 41 GGACGGACATCTATTGTTCATCTGTTTGAATGGCGATGGGT GGACGGACATCTATTGTTCATATGTTTGAATGGCGATGGGT < 41bp 0.525781560740844 0.852426784780183 0.35872078 0.6611447 prediction 0.653290448078678 Functional Gain - AMY2B ENSG00000240038 CDS Human protein_coding chr1:104114314 chr1:104114315 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_28026 0 0 0 0 1 exosome 0.43871859299502 0.438718591682147 0.3222894 0 hPsi_site_21750 iPseU_CNN:0.3222894;iRNA_PseU:0 21751 chr17 72366781 72366781 1 + C A UCEC 72366780 + 72366760 72366800 41 TGTGGCTGGCGTCATCCCTGTCATCTACTACAGTGTCCTGC TGTGGCTGGCGTCATCCCTGTAATCTACTACAGTGTCCTGC < 41bp 0.455612420836351 0.826639600693923 0.34254122 0.9082081 prediction 0.653279201387845 Functional Gain - GPR142 ENSG00000257008 CDS Human protein_coding chr17:72366780 chr17:72366781 synonymous SNV . 0 22 hPsi_associated_SNPs_28027 0 0 0 0 1 exosome 0.438716908480584 0.438718290923912 0.8164162 0 hPsi_site_21751 iPseU_CNN:0.8164162;iRNA_PseU:0 21752 chr17 40673228 40673228 1 + G A rs529402274 40673227 + 40673207 40673247 41 TCTGCCTGTTGGTTGTGATCTGTGGGCACCAGCTCATTCGT TCTGCCTGTTGGTTGTGATCTATGGGCACCAGCTCATTCGT < 41bp 0.444532781083425 0.826634534912431 0.40368748 0.6118354 prediction 0.653269069824862 Functional Gain - ATP6V0A1 ENSG00000033627 UTR3 Human protein_coding chr17:40673227 chr17:40673228 . . 0 22 hPsi_associated_SNPs_28028 0 0 1 0 0 Endoplasmic reticulum 0.438637921952812 0.438840520073657 0.2236708 0 hPsi_site_21752 iPseU_CNN:0.2236708;iRNA_PseU:0 21753 chr10 99330797 99330797 1 + G A rs556160775 99330796 + 99330776 99330816 41 CCCAGCACAATTGGCAGAGATGAGGCGGGTGGTGGACAGCT CCCAGCACAATTGGCAGAGATAAGGCGGGTGGTGGACAGCT < 41bp 0.520292447458934 0.846925931810195 0.22047758 0.22983328 prediction 0.653266968702523 Functional Gain - UBTD1 ENSG00000165886 UTR3 Human protein_coding chr10:99330796 chr10:99330797 . . 0 22 hPsi_associated_SNPs_28029 0 0 1 0 0 Cytosol 0.438600430630162 0.438654820968363 0 0 hPsi_site_21753 iPseU_CNN:0;iRNA_PseU:0 21754 chr20 31814273 31814273 1 + C A UCEC 31814272 + 31814252 31814292 41 AAAGAGAATCTGCAAAAAGTTCTCCCACACATGGTAGAAAG AAAGAGAATCTGCAAAAAGTTATCCCACACATGGTAGAAAG < 41bp 0.52503415239867 0.851663861664909 0.2422142 0.43491766 prediction 0.653259418532478 Functional Gain - BPIFA3 ENSG00000131059 CDS Human protein_coding chr20:31814272 chr20:31814273 nonsynonymous SNV 0.156 0 22 hPsi_associated_SNPs_28030 0 0 0 0 2 unknown 0.439374610067881 0.438883708635825 0 0 hPsi_site_21754 iPseU_CNN:0;iRNA_PseU:0 21755 chr1 223179217 223179217 1 + C A UCEC 223179216 + 223179196 223179236 41 TTGTGAGAGTGAAGTGCAATTCTGTGGACTGTCAAATGCCA TTGTGAGAGTGAAGTGCAATTATGTGGACTGTCAAATGCCA < 41bp 0.510373445023975 0.837002948235042 0.24899167 0.643517 prediction 0.653259006422135 Functional Gain - DISP1 ENSG00000154309 CDS Human protein_coding chr1:223179216 chr1:223179217 nonsynonymous SNV 0.092 4 22 hPsi_associated_SNPs_28031 0 0 0 0 0 Cytosol 0.438727150755199 0.438377542900106 0.287034 0 hPsi_site_21755 iPseU_CNN:0.287034;iRNA_PseU:0 21756 chr19 2403135 2403135 1 + G A SKCM 2403134 + 2403114 2403154 41 CAGCCAGTGTGTGACCAAGGTGAACCCGGAGTGTGACGACC CAGCCAGTGTGTGACCAAGGTAAACCCGGAGTGTGACGACC < 41bp 0.410599407522135 0.826624741664142 0.41205916 0.74445564 prediction 0.653249483328284 Functional Gain - TMPRSS9 ENSG00000178297 CDS Human protein_coding chr19:2403134 chr19:2403135 synonymous SNV . 0 22 hPsi_associated_SNPs_28032 0 0 0 0 2 chromatin 0.438719826468792 0.438719266825546 0.48891128 0 hPsi_site_21756 iPseU_CNN:0.48891128;iRNA_PseU:0 21757 chr16 89704614 89704614 1 + G A STAD 89704613 + 89704593 89704633 41 CCCTCGCTCCCCTGGTCCTCTGTCTGTCTCTCCTGTGAAAC CCCTCGCTCCCCTGGTCCTCTATCTGTCTCTCCTGTGAAAC < 41bp 0.426791813884365 0.826622364913693 0.34204492 0.6856824 prediction 0.653244729827387 Functional Gain - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89704613 chr16:89704614 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28033 0 0 1 0 0 Ribosome 0.438702223774526 0.438703635024076 0.3713648 0 hPsi_site_21757 iPseU_CNN:0.3713648;iRNA_PseU:0 21758 chr12 53862591 53862591 1 + C A UCEC 53862590 + 53862570 53862610 41 ATGCATCTGCTCAGACTACTTCTCATGAACTCACCATTCCA ATGCATCTGCTCAGACTACTTATCATGAACTCACCATTCCA < 41bp 0.526468435665374 0.853089962986125 0.26792443 0.46794483 prediction 0.653243054641501 Functional Gain - PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53862590 chr12:53862591 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28034 0 0 1 0 3 Cytosol 0.438949094308613 0.438496153813278 0 0 hPsi_site_21758 iPseU_CNN:0;iRNA_PseU:0 21759 chr3 122283371 122283371 1 + C A UCEC 122283370 + 122283350 122283390 41 TGGAGAGCTACTTCCAGAGCTCTAAGTCCTCGGGCGGCGGG TGGAGAGCTACTTCCAGAGCTATAAGTCCTCGGGCGGCGGG < 41bp 0.521212387399727 0.847829745787822 0.35058397 0.6322825 prediction 0.65323471677619 Functional Gain - DTX3L ENSG00000163840 CDS Human protein_coding chr3:122283370 chr3:122283371 nonsynonymous SNV 0.139 0 22 hPsi_associated_SNPs_28035 0 0 1 0 1 Nucleus 0.438718593000271 0.43871859293685 0.264565 0 hPsi_site_21759 iPseU_CNN:0.264565;iRNA_PseU:0 21760 chr16 2130329 2130329 1 + G A PAAD 2130328 + 2130308 2130348 41 GACGAACCTGGCGGCCTATGTGCCCCTGCTGACCCAGGGCT GACGAACCTGGCGGCCTATGTACCCCTGCTGACCCAGGGCT < 41bp 0.417457177230666 0.82661311282796 0.2804526 0.4467314 prediction 0.653226225655921 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2130328 chr16:2130329 synonymous SNV . 0 22 hPsi_associated_SNPs_28036 0 0 1 0 1 Endoplasmic reticulum 0.438718706553778 0.438718910455853 0 0 hPsi_site_21760 iPseU_CNN:0;iRNA_PseU:0 21761 chr19 58868471 58868471 1 + G A BLCA 58868470 + 58868450 58868490 41 GTGTGTCTCCTGGTGGTGGATGAGCTGCGAGTGCGCGCGGA GTGTGTCTCCTGGTGGTGGATAAGCTGCGAGTGCGCGCGGA < 41bp 0.552162452195018 0.878774379159809 0.25986242 0.45611924 prediction 0.653223853929582 Functional Gain - ZNF497 ENSG00000174586 CDS Human protein_coding chr19:58868470 chr19:58868471 synonymous SNV . 0 22 hPsi_associated_SNPs_28037 0 0 0 0 0 Nucleus 0.438717994793246 0.438721941555233 0 0 hPsi_site_21761 iPseU_CNN:0;iRNA_PseU:0 21762 chr11 59210908 59210908 1 + C A UCEC 59210907 + 59210887 59210927 41 CAATATGCTCACTGACTTCTTCTGGGAGCAGAAGACCATAT CAATATGCTCACTGACTTCTTATGGGAGCAGAAGACCATAT < 41bp 0.46985562463633 0.826607897813739 0.18807122 0.22084484 prediction 0.653215795627478 Functional Gain - OR5A1 ENSG00000172320 CDS Human protein_coding chr11:59210907 chr11:59210908 nonsynonymous SNV 0.915 1 22 hPsi_associated_SNPs_28038 0 0 0 0 0 unknown 0.440267000726421 0.438721626817241 0 0 hPsi_site_21762 iPseU_CNN:0;iRNA_PseU:0 21763 chr7 140373652 140373652 1 + G A KIRC 140373651 + 140373631 140373671 41 TTCCAAGCTGCATGTCCGAGTGACGCCCCACCCGTGGACTC TTCCAAGCTGCATGTCCGAGTAACGCCCCACCCGTGGACTC < 41bp 0.573727082360237 0.900329555499712 0.233011 0.43396693 prediction 0.65320494627895 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373651 chr7:140373652 synonymous SNV . 0 22 hPsi_associated_SNPs_28039 0 0 1 0 0 Ribosome 0.438718575670731 0.43872861117379 0 0 hPsi_site_21763 iPseU_CNN:0;iRNA_PseU:0 21764 chr15 42119086 42119086 1 + C A rs140693998 42119085 + 42119065 42119105 41 AAGAGTTGAGGAAAGGTTTTTCTGGGCCCTACTGCTCCCCT AAGAGTTGAGGAAAGGTTTTTATGGGCCCTACTGCTCCCCT < 41bp 0.49951890025302 0.826601384789026 0.33146393 0.5315321 prediction 0.653202769578052 Functional Gain - MAPKBP1 ENSG00000250379 ncRNA_intronic Human antisense chr15:42119085 chr15:42119086 . . 0 22 hPsi_associated_SNPs_28040 0 0 1 0 0 Endoplasmic reticulum 0.438718592995102 0.438718595473826 0.0630641999999999 0 hPsi_site_21764 iPseU_CNN:0.0630641999999999;iRNA_PseU:0 21765 chr3 48506409 48506409 1 + G A rs150987968 48506408 + 48506388 48506428 41 GATGCACTGCGTGGAGGTCCTGCATCAGTTTGACCAGGTGA GATGCACTGCGTGGAGGTCCTACATCAGTTTGACCAGGTGA < 41bp 0.528425166908512 0.855023234039181 0.22059876 0.4067152 prediction 0.653196134261337 Functional Gain - ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506408 chr3:48506409 synonymous SNV . 0 22 hPsi_associated_SNPs_28041 0 0 1 0 1 chromatin 0.439100330373116 0.438907624920968 0 0 hPsi_site_21765 iPseU_CNN:0;iRNA_PseU:0 21766 chr1 228333285 228333285 1 + G A UCEC 228333284 + 228333264 228333304 41 GAGCACCCTGCTGAAGAGGCTGCTCCAGGAGCACAGCGGCA GAGCACCCTGCTGAAGAGGCTACTCCAGGAGCACAGCGGCA < 41bp 0.565449947221067 0.892045032125401 0.28665724 0.6598679 prediction 0.653190169808669 Functional Gain - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333284 chr1:228333285 nonsynonymous SNV 0.722 0 22 hPsi_associated_SNPs_28042 0 0 1 0 2 Endoplasmic reticulum 0.439701495018077 0.43826353589547 0.3197358 0 hPsi_site_21766 iPseU_CNN:0.3197358;iRNA_PseU:0 21767 chr7 157178322 157178322 1 + G A OV 157178321 + 157178301 157178341 41 AAATGGTAAGGAGCAGCTGCTGCGCTTGGATAACAAGTAAT AAATGGTAAGGAGCAGCTGCTACGCTTGGATAACAAGTAAT < 41bp 0.443485367626763 0.826594534996914 0.26684994 0.6938048 prediction 0.653189069993828 Functional Gain - DNAJB6 ENSG00000105993 CDS Human protein_coding chr7:157178321 chr7:157178322 synonymous SNV . 0 22 hPsi_associated_SNPs_28043 0 0 1 0 1 Ribosome 0.438718656447172 0.438718593185302 0.3876096 0 hPsi_site_21767 iPseU_CNN:0.3876096;iRNA_PseU:0 21768 chr3 12856686 12856686 1 + G A COAD 12856685 + 12856665 12856705 41 CGATGACATGAGCTGGAAGGTGCGCCGGGCAGCTGCCAAGT CGATGACATGAGCTGGAAGGTACGCCGGGCAGCTGCCAAGT < 41bp 0.402998473685628 0.82659348102734 0.26148546 0.8627692 prediction 0.653186962054681 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12856685 chr3:12856686 synonymous SNV . 0 22 hPsi_associated_SNPs_28044 0 0 0 0 1 chromatin 0.43871860831472 0.43871859747548 0.7255384 0 hPsi_site_21768 iPseU_CNN:0.7255384;iRNA_PseU:0 21769 chr21 46047258 46047258 1 + G A rs79806035 46047257 + 46047237 46047277 41 TGAGCCGTGTATCCAGCCCCTGCTGCCAGGTGACCTGTGAG TGAGCCGTGTATCCAGCCCCTACTGCCAGGTGACCTGTGAG < 41bp 0.55441479344721 0.880999372004349 0.22988302 0.30567443 prediction 0.653169157114277 Functional Gain - KRTAP10-9 ENSG00000221837 CDS Human protein_coding chr21:46047257 chr21:46047258 nonsynonymous SNV 0.810 3 22 hPsi_associated_SNPs_28045 0 0 0 0 0 unknown 0.438718805087184 0.438718605433025 0 0 hPsi_site_21769 iPseU_CNN:0;iRNA_PseU:0 21770 chr11 58893539 58893539 1 + G A UCEC 58893538 + 58893518 58893558 41 TCAGGCTCCCCAGTGTTTAATGCATCTGGCAAATTGGTTGC TCAGGCTCCCCAGTGTTTAATACATCTGGCAAATTGGTTGC < 41bp 0.437585127125722 0.826579470678575 0.19885194 0.22658595 prediction 0.653158941357151 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58893538 chr11:58893539 nonsynonymous SNV 0.167 1 22 hPsi_associated_SNPs_28046 0 0 0 0 0 Cytosol 0.438718294799825 0.438718624621063 0 0 hPsi_site_21770 iPseU_CNN:0;iRNA_PseU:0 21771 chr11 55594833 55594833 1 + G A OV 55594832 + 55594812 55594852 41 TTAGCCAATCTGGGCATGACTGCACTGATTCAGGTCAGCTC TTAGCCAATCTGGGCATGACTACACTGATTCAGGTCAGCTC < 41bp 0.557696522451177 0.884275561936729 0.26714468 0.3971482 prediction 0.653158078971104 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55594832 chr11:55594833 nonsynonymous SNV 0.142 0 22 hPsi_associated_SNPs_28047 0 0 0 0 0 unknown 0.438723010760759 0.438730553171689 0 0 hPsi_site_21771 iPseU_CNN:0;iRNA_PseU:0 21772 chr9 32408576 32408576 1 + C A KIRC 32408575 + 32408555 32408595 41 GTGAAAAAGTTAGGAGGAGATCCAGAGAAAATAAACCCTGT GTGAAAAAGTTAGGAGGAGATACAGAGAAAATAAACCCTGT < 41bp 0.475877028778218 0.826578053061178 0.20041743 0.37465715 prediction 0.653156106122356 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32408575 chr9:32408576 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28048 0 0 1 0 2 Ribosome 0.438718592618236 0.438718592829827 0 0 hPsi_site_21772 iPseU_CNN:0;iRNA_PseU:0 21773 chr16 3339435 3339435 1 + G A rs220379 3339434 + 3339414 3339454 41 TGGAAGGTGTTCCGTCTGTATGCTCTGAGAACATCCACCCT TGGAAGGTGTTCCGTCTGTATACTCTGAGAACATCCACCCT < 41bp 0.41911142161816 0.826577897211882 0.24189419 0.47962528 prediction 0.653155794423765 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339434 chr16:3339435 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_28049 0 0 1 0 0 Cytosol 0.438989545000987 0.439045440049744 0 0 hPsi_site_21773 iPseU_CNN:0;iRNA_PseU:0 21774 chr21 46117679 46117679 1 + G A GBM 46117678 + 46117658 46117698 41 CAGCTTGCTGCACCACCTCCTGCTGCAGACCCTCCTCCTCC CAGCTTGCTGCACCACCTCCTACTGCAGACCCTCCTCCTCC < 41bp 0.43946808833548 0.826577098985775 0.29461926 0.45155793 prediction 0.65315419797155 Functional Gain - KRTAP10-12 ENSG00000189169 CDS Human protein_coding chr21:46117678 chr21:46117679 nonsynonymous SNV 0.615 3 22 hPsi_associated_SNPs_28050 0 0 0 0 0 unknown 0.438718619912154 0.438718593764331 0 0 hPsi_site_21774 iPseU_CNN:0;iRNA_PseU:0 21775 chr20 34060620 34060620 1 + G A STAD 34060619 + 34060599 34060639 41 AGACAAGGCTCTTACTCTGGTGCGTTCAGTGCTGACTCGGA AGACAAGGCTCTTACTCTGGTACGTTCAGTGCTGACTCGGA < 41bp 0.417666035183479 0.826568034666546 0.34331214 0.76750875 prediction 0.653136069333093 Functional Gain - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34060619 chr20:34060620 synonymous SNV . 0 22 hPsi_associated_SNPs_28051 0 0 1 1 1 Cytosol 0.438718892102877 0.43871861346893 0.5350175 0 hPsi_site_21775 iPseU_CNN:0.5350175;iRNA_PseU:0 21776 chr6 151789604 151789604 1 + C A UCEC 151789603 + 151789583 151789623 41 TTATTGAATGATATGGAACATCTTTGGTCATTGCTTAGCAA TTATTGAATGATATGGAACATATTTGGTCATTGCTTAGCAA < 41bp 0.488922412844042 0.82656716543144 0.26982123 0.33331645 prediction 0.65313433086288 Functional Gain - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151789603 chr6:151789604 nonsynonymous SNV 0.952 1 22 hPsi_associated_SNPs_28052 0 0 1 0 0 Ribosome 0.438718594844831 0.438942029779874 0 0 hPsi_site_21776 iPseU_CNN:0;iRNA_PseU:0 21777 chr22 21799586 21799586 1 + C A CESC 21799585 + 21799565 21799605 41 GCTGCCCGAGTTGGCAGCCCTCTGCCGCCGCAAACTCAAGC GCTGCCCGAGTTGGCAGCCCTATGCCGCCGCAAACTCAAGC < 41bp 0.526518472562226 0.853073047701678 0.34987897 0.6081161 prediction 0.653109150278905 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799585 chr22:21799586 synonymous SNV . 0 22 hPsi_associated_SNPs_28053 0 0 1 0 0 chromatin 0.438718718013551 0.43872051048846 0.2162322 0 hPsi_site_21777 iPseU_CNN:0.2162322;iRNA_PseU:0 21778 chr18 8796352 8796352 1 + C A BRCA 8796351 + 8796331 8796371 41 GAATCTGATGCAGCAGGAGCTCCGGTCCTTGAAGCAGAACA GAATCTGATGCAGCAGGAGCTACGGTCCTTGAAGCAGAACA < 41bp 0.455489342174252 0.826540995492966 0.3460173 0.51851606 prediction 0.653081990985932 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8796351 chr18:8796352 synonymous SNV . 0 22 hPsi_associated_SNPs_28054 0 0 0 0 0 Nucleus 0.438717104555775 0.438709389794971 0.0370321199999999 0 hPsi_site_21778 iPseU_CNN:0.0370321199999999;iRNA_PseU:0 21779 chr16 58079224 58079224 1 + G A SKCM 58079223 + 58079203 58079243 41 ACGGACGGTGAACGTGGTGATGGTGCTGGTGCCACTGCTGC ACGGACGGTGAACGTGGTGATAGTGCTGGTGCCACTGCTGC < 41bp 0.423349835388417 0.82654043294976 0.22446924 0.67978704 prediction 0.653080865899519 Functional Gain - MMP15 ENSG00000102996 CDS Human protein_coding chr16:58079223 chr16:58079224 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_28055 0 0 1 0 0 Ribosome 0.438656647917472 0.4387196077489 0.35957408 0 hPsi_site_21779 iPseU_CNN:0.35957408;iRNA_PseU:0 21780 chr9 136328615 136328615 1 + C A LUSC 136328614 + 136328594 136328634 41 CTTGTTTCAAGCTTGCGCGATCTCTGGCCTCTTCAACTGCA CTTGTTTCAAGCTTGCGCGATATCTGGCCTCTTCAACTGCA < 41bp 0.539615992726522 0.866156254825215 0.32869002 0.6197647 prediction 0.653080524197387 Functional Gain - CACFD1 ENSG00000160325 CDS Human protein_coding chr9:136328614 chr9:136328615 synonymous SNV . 0 22 hPsi_associated_SNPs_28056 0 0 0 0 3 Ribosome 0.438707236329447 0.43869439849864 0.2395294 0 hPsi_site_21780 iPseU_CNN:0.2395294;iRNA_PseU:0 21781 chr2 27275977 27275977 1 + G A BLCA 27275976 + 27275956 27275996 41 AGTGGCATTGCCTCTTCCCCTGACTATGAATTCAACGTGTG AGTGGCATTGCCTCTTCCCCTAACTATGAATTCAACGTGTG < 41bp 0.416143197934427 0.826537362514244 0.27442306 0.3522079 prediction 0.653074725028489 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27275976 chr2:27275977 nonsynonymous SNV 0.943 5 22 hPsi_associated_SNPs_28057 0 0 1 0 1 Cytosol 0.438711452660637 0.4387246584512 0 0 hPsi_site_21781 iPseU_CNN:0;iRNA_PseU:0 21782 chr7 150439891 150439891 1 + G A SKCM 150439890 + 150439870 150439910 41 GAGGGCTCCTTCCACAGCAATGACCTCTTCTTGGATGCCCA GAGGGCTCCTTCCACAGCAATAACCTCTTCTTGGATGCCCA < 41bp 0.418479528553881 0.826535664011526 0.2795093 0.32392317 prediction 0.653071328023053 Functional Gain - GIMAP1-GIMAP5;GIMAP5 ENSG00000196329 CDS Human protein_coding chr7:150439890 chr7:150439891 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_28058 0 0 0 0 0 unknown 0.438712553841398 0.43871731841108 0 0 hPsi_site_21782 iPseU_CNN:0;iRNA_PseU:0 21783 chr19 55512153 55512153 1 + G A SKCM 55512152 + 55512132 55512172 41 AAAATCGATGACTTTAATGATGAACTCAATAAGCTGCTGGA AAAATCGATGACTTTAATGATAAACTCAATAAGCTGCTGGA < 41bp 0.44009791530994 0.826534670705215 0.44999418 0.73184454 prediction 0.653069341410429 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55512152 chr19:55512153 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28059 0 0 0 0 1 Cytosol 0.438608197175522 0.436171224946472 0.46368908 0 hPsi_site_21783 iPseU_CNN:0.46368908;iRNA_PseU:0 21784 chr12 57626558 57626558 1 + G A HNSC 57626557 + 57626537 57626577 41 TGGCCTGGTGGCTGCCAAGGTGATTCCCTCGCCTTTCAAGC TGGCCTGGTGGCTGCCAAGGTAATTCCCTCGCCTTTCAAGC < 41bp 0.579681879018614 0.906214097920615 0.31230313 0.42098826 prediction 0.653064437804002 Functional Gain - SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57626557 chr12:57626558 synonymous SNV . 0 22 hPsi_associated_SNPs_28060 0 0 1 0 2 Cytosol 0.438718593131098 0.438718592989991 0 0 hPsi_site_21784 iPseU_CNN:0;iRNA_PseU:0 21785 chr3 39431916 39431916 1 + C A UCEC 39431915 + 39431895 39431935 41 CCATTTTGTCTGCTTTCAGGTCTAGACGTGTTGGGATGTTG CCATTTTGTCTGCTTTCAGGTATAGACGTGTTGGGATGTTG < 41bp 0.485381372927115 0.826531961039052 0.2154353 0.71428645 prediction 0.653063922078104 Functional Gain - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431915 chr3:39431916 nonsynonymous SNV 0.638 1 22 hPsi_associated_SNPs_28061 0 0 0 0 2 Ribosome 0.438697034308436 0.438944102076159 0.4285729 0 hPsi_site_21785 iPseU_CNN:0.4285729;iRNA_PseU:0 21786 chr22 24666849 24666849 1 + G A rs145289841 24666848 + 24666828 24666868 41 AGCGGCGCTGCGGGGTAGGCTGCTTTCCTGAGGCCGGACTC AGCGGCGCTGCGGGGTAGGCTACTTTCCTGAGGCCGGACTC < 41bp 0.541669271525145 0.868200723256385 0.37576848 0.7923372 prediction 0.65306290346248 Functional Gain - SPECC1L-ADORA2A ENSG00000100014 UTR5 Human protein_coding chr22:24666848 chr22:24666849 . . 0 22 hPsi_associated_SNPs_28062 0 0 1 0 0 exosome 0.43871359781922 0.437250594767676 0.5846744 0 hPsi_site_21786 iPseU_CNN:0.5846744;iRNA_PseU:0 21787 chr19 36243117 36243117 1 + C A UCEC 36243116 + 36243096 36243136 41 CCGGAACCAACTGGATGCTGTCTTGCAGTGTCTGCTGGAGA CCGGAACCAACTGGATGCTGTATTGCAGTGTCTGCTGGAGA < 41bp 0.54920265807789 0.875733676076037 0.34509623 0.65506613 prediction 0.653062035996293 Functional Gain - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36243116 chr19:36243117 synonymous SNV . 0 22 hPsi_associated_SNPs_28063 0 0 1 0 2 Cytosol 0.438718294149674 0.438589643854803 0.31013226 0 hPsi_site_21787 iPseU_CNN:0.31013226;iRNA_PseU:0 21788 chr17 15641674 15641674 1 + C A LUAD 15641673 + 15641653 15641693 41 TTTGCTAGATATTGACAGAATCAAGTCCCAGAACCCAGGCA TTTGCTAGATATTGACAGAATAAAGTCCCAGAACCCAGGCA < 41bp 0.54286542525994 0.869391682582567 0.3719595 0.34603372 prediction 0.653052514645254 Functional Gain - TBC1D26 ENSG00000214946 CDS Human protein_coding chr17:15641673 chr17:15641674 synonymous SNV . 0 22 hPsi_associated_SNPs_28064 0 0 1 0 2 exosome 0.438714553623751 0.438711184188135 0 0 hPsi_site_21788 iPseU_CNN:0;iRNA_PseU:0 21789 chr20 2797467 2797467 1 + G A rs561743857 2797466 + 2797446 2797486 41 CACCACTGGCTCCCACCTGCTGAGCTCCTTGTGGCCTGTCG CACCACTGGCTCCCACCTGCTAAGCTCCTTGTGGCCTGTCG < 41bp 0.571028617941123 0.897553794662637 0.31761196 0.67202365 prediction 0.653050353443028 Functional Gain - TMEM239 ENSG00000198326;ENSG00000241690 CDS Human other chr20:2797466 chr20:2797467 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28065 0 0 0 0 0 unknown 0.438735178614748 0.442076937420082 0.3440473 0 hPsi_site_21789 iPseU_CNN:0.3440473;iRNA_PseU:0 21790 chr7 27831697 27831697 1 + G A LIHC 27831696 + 27831676 27831716 41 CAGGCAACTCGGCAAGAAGTTGTCTTTCTGGCTAAAGAACT CAGGCAACTCGGCAAGAAGTTATCTTTCTGGCTAAAGAACT < 41bp 0.576339857563817 0.902863950678653 0.3161339 0.6818465 prediction 0.653048186229672 Functional Gain - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27831696 chr7:27831697 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_28066 0 0 1 0 1 Ribosome 0.438718592986389 0.438718592995099 0.363693 0 hPsi_site_21790 iPseU_CNN:0.363693;iRNA_PseU:0 21791 chr1 159175886 159175886 1 + C A UCEC 159175885 + 159175865 159175905 41 AGCCTGTCTTGCCATCTTTGTCTTGTTGCCATTGGGTTTGT AGCCTGTCTTGCCATCTTTGTATTGTTGCCATTGGGTTTGT < 41bp 0.538387688029606 0.864898315047308 0.30909526 0.5731812 prediction 0.653021254035404 Functional Gain - ACKR1 ENSG00000213088 CDS Human protein_coding chr1:159175885 chr1:159175886 synonymous SNV . 0 22 hPsi_associated_SNPs_28067 0 0 0 0 0 Endoplasmic reticulum 0.438405658533589 0.438683415782389 0.1463624 0 hPsi_site_21791 iPseU_CNN:0.1463624;iRNA_PseU:0 21792 chr6 41303865 41303865 1 + G A HNSC 41303864 + 41303844 41303884 41 GGCTCAGGTACTTCAAAGTGTGGCAGGGCAGACGCTAACCG GGCTCAGGTACTTCAAAGTGTAGCAGGGCAGACGCTAACCG < 41bp 0.413311162546407 0.826507882424882 0.29180348 0.34188068 prediction 0.653015764849764 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41303864 chr6:41303865 synonymous SNV . 0 22 hPsi_associated_SNPs_28068 0 0 0 0 1 exosome 0.438718592994234 0.438719170521223 0 0 hPsi_site_21792 iPseU_CNN:0;iRNA_PseU:0 21793 chr1 13910471 13910471 1 + C A LUAD 13910470 + 13910450 13910490 41 GCCGCGGTGCTTTTTAATTTTCCCCCAGCTCAGAATCTTGC GCCGCGGTGCTTTTTAATTTTACCCCAGCTCAGAATCTTGC < 41bp 0.520904222629821 0.847409507622551 0.302185 0.62723094 prediction 0.65301056998546 Functional Gain - PDPN ENSG00000162493 CDS Human protein_coding chr1:13910470 chr1:13910471 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28069 0 0 1 0 0 Ribosome 0.43871859219603 0.43871856619683 0.25446188 0 hPsi_site_21793 iPseU_CNN:0.25446188;iRNA_PseU:0 21794 chr16 29845332 29845332 1 + G A UCEC 29845331 + 29845311 29845351 41 CATCAGGCAGAACCAGGCTCTGCGGCTCAGGGCCCGCAAGG CATCAGGCAGAACCAGGCTCTACGGCTCAGGGCCCGCAAGG < 41bp 0.399425326938864 0.826504803819442 0.32253692 0.60942245 prediction 0.653009607638885 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29845331 chr16:29845332 synonymous SNV . 0 22 hPsi_associated_SNPs_28070 0 0 1 0 2 Nucleus 0.438718592995102 0.438718592995102 0.2188449 0 hPsi_site_21794 iPseU_CNN:0.2188449;iRNA_PseU:0 21795 chr17 4624301 4624301 1 + G A LUAD 4624300 + 4624280 4624320 41 CCGGCTTCGGCTGAAGGGGATGAAGGATGACGACTATGATG CCGGCTTCGGCTGAAGGGGATAAAGGATGACGACTATGATG < 41bp 0.431348318081959 0.826497126369069 0.52336735 0.6055183 prediction 0.652994252738139 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4624300 chr17:4624301 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28071 0 0 1 0 1 Cytosol 0.438718895891161 0.438718580271178 0.1643019 0 hPsi_site_21795 iPseU_CNN:0.1643019;iRNA_PseU:0 21796 chr2 191236083 191236083 1 + G A CESC 191236082 + 191236062 191236102 41 GAAGCGGCTGGAGACATTCCTGAGCCTCCTGGTCCAAAACC GAAGCGGCTGGAGACATTCCTAAGCCTCCTGGTCCAAAACC < 41bp 0.565280089090207 0.891776742496184 0.39077064 0.7504803 prediction 0.652993306811954 Functional Gain - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191236082 chr2:191236083 synonymous SNV . 0 22 hPsi_associated_SNPs_28072 0 0 1 0 0 exosome 0.438718597252819 0.438718483478902 0.5009606 0 hPsi_site_21796 iPseU_CNN:0.5009606;iRNA_PseU:0 21797 chr7 154862888 154862888 1 + C A LUAD 154862887 + 154862867 154862907 41 TGTCCTGGTGGCCGCGCTGGTCATGCCGCTGAGCCTGGTGC TGTCCTGGTGGCCGCGCTGGTAATGCCGCTGAGCCTGGTGC < 41bp 0.529540713993542 0.856034442790354 0.33625922 0.7676228 prediction 0.652987457593624 Functional Gain - HTR5A ENSG00000157219;ENSG00000220575 CDS Human other chr7:154862887 chr7:154862888 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28073 0 0 0 0 0 exosome 0.438712006953306 0.438713775936438 0.5352456 0 hPsi_site_21797 iPseU_CNN:0.5352456;iRNA_PseU:0 21798 chr20 62729309 62729309 1 + G T COAD 62729308 + 62729288 62729328 41 TGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCAC TGCAAGACAGTCATTGCCATTTACTACTACAACATGTTCAC < 41bp 0.492001926331838 0.826493429210464 0.18408564 0.28704852 prediction 0.652986858420927 Functional Gain - OPRL1 ENSG00000125510 CDS Human protein_coding chr20:62729308 chr20:62729309 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_28074 0 0 0 0 0 exosome 0.437899626328035 0.438717208606214 0 0 hPsi_site_21798 iPseU_CNN:0;iRNA_PseU:0 21799 chr1 173799869 173799869 1 + C A UCEC 173799868 + 173799848 173799888 41 GGTGCAAGTGTCTGGTACAGTCATTTCCCGTCCTGCAGGAC GGTGCAAGTGTCTGGTACAGTAATTTCCCGTCCTGCAGGAC < 41bp 0.459694673786147 0.826487929980561 0.270316 0.72009206 prediction 0.652975859961122 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173799868 chr1:173799869 synonymous SNV . 0 22 hPsi_associated_SNPs_28075 0 0 1 0 2 chromatin 0.438715465282739 0.438717873712435 0.44018412 0 hPsi_site_21799 iPseU_CNN:0.44018412;iRNA_PseU:0 21800 chr1 155290277 155290277 1 + G A BRCA 155290276 + 155290256 155290296 41 GGAGCTGGATCTGCCAGCAGTGTTCTTGCAATATGAGGAAG GGAGCTGGATCTGCCAGCAGTATTCTTGCAATATGAGGAAG < 41bp 0.577068255318376 0.903554739505393 0.2104142 0.34395975 prediction 0.652972968374034 Functional Gain - FDPS ENSG00000160752 CDS Human protein_coding chr1:155290276 chr1:155290277 synonymous SNV . 0 22 hPsi_associated_SNPs_28076 0 0 1 0 1 Cytosol 0.438724665990785 0.438718510977845 0 0 hPsi_site_21800 iPseU_CNN:0;iRNA_PseU:0 21801 chr2 61413920 61413920 1 + G A SKCM 61413919 + 61413899 61413939 41 AGCTGACCCCCCTAAATGGTTGAATTAAAATTTATTATAAG AGCTGACCCCCCTAAATGGTTAAATTAAAATTTATTATAAG < 41bp 0.556471256491683 0.882943349412368 0.3005454 0.44817847 prediction 0.652944185841369 Functional Gain - AHSA2 ENSG00000173209 CDS Human protein_coding chr2:61413919 chr2:61413920 synonymous SNV . 0 22 hPsi_associated_SNPs_28077 0 0 1 3 0 Nucleus 0.438718592995225 0.438718522271237 0 0 hPsi_site_21801 iPseU_CNN:0;iRNA_PseU:0 21802 chr5 161128783 161128783 1 + G A rs534098996 161128782 + 161128762 161128802 41 AGTAGCAGTGTTGAATAGCTTGCGGCCAGGACAACCTGAAT AGTAGCAGTGTTGAATAGCTTACGGCCAGGACAACCTGAAT < 41bp 0.539621644480987 0.866092238598233 0.16705275 0.5277901 prediction 0.652941188234492 Functional Gain - GABRA6 ENSG00000145863 UTR3 Human protein_coding chr5:161128782 chr5:161128783 . . 0 22 hPsi_associated_SNPs_28078 0 0 0 0 0 unknown 0.43871859468805 0.438717811020778 0.0555802000000001 0 hPsi_site_21802 iPseU_CNN:0.0555802000000001;iRNA_PseU:0 21803 chr15 34395598 34395598 1 + G A UCEC 34395597 + 34395577 34395617 41 AAAGTCAGTCTGGTTATGTGTGGAATGCGCTTGTTCACACA AAAGTCAGTCTGGTTATGTGTAGAATGCGCTTGTTCACACA < 41bp 0.567559518803392 0.894026822080586 0.3964587 0.6690881 prediction 0.652934606554387 Functional Gain - PGBD4 ENSG00000182405 CDS Human protein_coding chr15:34395597 chr15:34395598 stopgain 0.560 0 22 hPsi_associated_SNPs_28079 0 0 0 0 0 exosome 0.438678029341271 0.438299199058819 0.3381762 0 hPsi_site_21803 iPseU_CNN:0.3381762;iRNA_PseU:0 21804 chr10 72511302 72511302 1 + G A STAD 72511301 + 72511281 72511321 41 GTACGTCATCCATGAGGACCTGCTGCCCCTTATCGGGAGCA GTACGTCATCCATGAGGACCTACTGCCCCTTATCGGGAGCA < 41bp 0.403596694030839 0.826464764293041 0.34328035 0.69444597 prediction 0.652929528586082 Functional Gain - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72511301 chr10:72511302 synonymous SNV . 0 22 hPsi_associated_SNPs_28080 0 0 1 0 1 chromatin 0.438716151847594 0.43871155738517 0.38889194 0 hPsi_site_21804 iPseU_CNN:0.38889194;iRNA_PseU:0 21805 chr15 63433648 63433648 1 + C A OV 63433647 + 63433627 63433667 41 TTTAAGAACTCAAATGAAAATCTTTTACCTGGATACCTCAA TTTAAGAACTCAAATGAAAATATTTTACCTGGATACCTCAA < 41bp 0.525900747199965 0.852360878366039 0.38189733 0.564364 prediction 0.652920262332148 Functional Gain - LACTB ENSG00000103642 CDS Human protein_coding chr15:63433647 chr15:63433648 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_28081 0 0 0 0 0 Endoplasmic reticulum 0.438718111860169 0.438718593107137 0.128728 0 hPsi_site_21805 iPseU_CNN:0.128728;iRNA_PseU:0 21806 chr8 145615940 145615940 1 + G A rs56192724 145615939 + 145615919 145615959 41 CAATGTTGTCCTTCGAGGGGTGGAAGAGGTTTGTCCTGGTG CAATGTTGTCCTTCGAGGGGTAGAAGAGGTTTGTCCTGGTG < 41bp 0.415538580698747 0.826448390828085 0.32155424 0.56555146 prediction 0.65289678165617 Functional Gain - ADCK5 ENSG00000173137 CDS Human protein_coding chr8:145615939 chr8:145615940 synonymous SNV . 0 22 hPsi_associated_SNPs_28082 0 0 1 0 2 chromatin 0.438775625694889 0.438798545210109 0.13110292 0 hPsi_site_21806 iPseU_CNN:0.13110292;iRNA_PseU:0 21807 chr2 68882648 68882648 1 + G A rs150404607 68882647 + 68882627 68882667 41 CGGTAAGTCCAGTGCAGACCTGGACCTCAAGACAATTGGGA CGGTAAGTCCAGTGCAGACCTAGACCTCAAGACAATTGGGA < 41bp 0.425082244804113 0.826443753550747 0.2078925 0.34219164 prediction 0.652887507101493 Functional Gain - PROKR1 ENSG00000169618 CDS Human protein_coding chr2:68882647 chr2:68882648 synonymous SNV . 0 22 hPsi_associated_SNPs_28083 0 0 0 0 0 exosome 0.438718745951563 0.43856205510332 0 0 hPsi_site_21807 iPseU_CNN:0;iRNA_PseU:0 21808 chr19 39909596 39909596 1 + C A UCEC 39909595 + 39909575 39909615 41 AAGAGGCTGTGGATTCACTGTCTCCAGCGCCTCTTCTTTGA AAGAGGCTGTGGATTCACTGTATCCAGCGCCTCTTCTTTGA < 41bp 0.555802339298915 0.882237826530809 0.36261192 0.5254135 prediction 0.652870974463788 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39909595 chr19:39909596 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_28084 0 0 0 0 2 Nucleus 0.438718573427359 0.438718593295858 0.050827 0 hPsi_site_21808 iPseU_CNN:0.050827;iRNA_PseU:0 21809 chr7 23207478 23207478 1 + G A KIRC 23207477 + 23207457 23207497 41 AACTCAGCTCTGTATTTATTTGAGTGCTATGATACGAGAAC AACTCAGCTCTGTATTTATTTAAGTGCTATGATACGAGAAC < 41bp 0.417228650351996 0.826434579180844 0.18548441 0.28130823 prediction 0.652869158361687 Functional Gain - KLHL7 ENSG00000122550 CDS Human protein_coding chr7:23207477 chr7:23207478 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28085 0 0 0 0 2 cytosol 0.439739317272291 0.438937039354278 0 0 hPsi_site_21809 iPseU_CNN:0;iRNA_PseU:0 21810 chr1 205240305 205240305 1 + G A UCEC 205240304 + 205240284 205240324 41 TGAGCTTCATCAGAACGAGATGACGAACCTGAAGCAGGAGC TGAGCTTCATCAGAACGAGATAACGAACCTGAAGCAGGAGC < 41bp 0.409034809934266 0.826431981798314 0.25454164 0.53434086 prediction 0.652863963596628 Functional Gain - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205240304 chr1:205240305 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_28086 0 0 1 0 2 chromatin 0.451579274062447 0.43985400772137 0.0686817200000001 0 hPsi_site_21810 iPseU_CNN:0.0686817200000001;iRNA_PseU:0 21811 chr18 9522410 9522410 1 + C A CESC 9522409 + 9522389 9522429 41 AATGTAACTATCTTCTGATTTCTTGGCTCATTGTGCACATG AATGTAACTATCTTCTGATTTATTGGCTCATTGTGCACATG < 41bp 0.470533055269927 0.82642857362031 0.32801157 0.33114463 prediction 0.65285714724062 Functional Gain - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9522409 chr18:9522410 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_28087 0 0 1 0 1 Ribosome 0.427438684764889 0.436784085830137 0 0 hPsi_site_21811 iPseU_CNN:0;iRNA_PseU:0 21812 chr12 119916982 119916982 1 + C A UCEC 119916981 + 119916961 119917001 41 CCATCCACAGCTGCATCATTTCTCCCTCGCTAACCGAGGCT CCATCCACAGCTGCATCATTTATCCCTCGCTAACCGAGGCT < 41bp 0.454995540968096 0.826424599651344 0.29877025 0.32766742 prediction 0.652849199302688 Functional Gain - CCDC60 ENSG00000183273 CDS Human protein_coding chr12:119916981 chr12:119916982 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_28088 0 0 0 0 2 exosome 0.438718592479797 0.438700377330687 0 0 hPsi_site_21812 iPseU_CNN:0;iRNA_PseU:0 21813 chr4 52740458 52740458 1 + C A GBM 52740457 + 52740437 52740477 41 GAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA GAAGTCTGCGGTCTTGCAGTTATTCAGACTGCTTTAATAAA < 41bp 0.482280669431227 0.826424168851237 0.33107868 0.65517604 prediction 0.652848337702475 Functional Gain - DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52740457 chr4:52740458 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_28089 0 0 1 1 2 Ribosome 0.438724523787837 0.438713665262077 0.31035208 0 hPsi_site_21813 iPseU_CNN:0.31035208;iRNA_PseU:0 21814 chr19 12738655 12738655 1 + C A LGG 12738654 + 12738634 12738674 41 AAAACCATATGAGTGTACTATCTGTGGAAAAGCCTTCATGC AAAACCATATGAGTGTACTATATGTGGAAAAGCCTTCATGC < 41bp 0.473630884737861 0.826419142742113 0.46107152 0.5989549 prediction 0.652838285484225 Functional Gain - ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12738654 chr19:12738655 synonymous SNV . 0 22 hPsi_associated_SNPs_28090 0 0 1 0 0 Cytosol 0.438713996897104 0.438739487817584 0.1979098 0 hPsi_site_21814 iPseU_CNN:0.1979098;iRNA_PseU:0 21815 chr22 47074262 47074262 1 + G A rs115392863 47074261 + 47074241 47074281 41 ACAGCGTTCCCTCCCCCGCGTGCCTAGCCGGTGCCGGTCCG ACAGCGTTCCCTCCCCCGCGTACCTAGCCGGTGCCGGTCCG < 41bp 0.4600588139637 0.8264179792798 0.21439406 0.44132465 prediction 0.6528359585596 Functional Gain - GRAMD4 ENSG00000075240 UTR3 Human protein_coding chr22:47074261 chr22:47074262 . . 0 22 hPsi_associated_SNPs_28091 0 0 0 0 0 Ribosome 0.4387185997224 0.438711141399817 0 0 hPsi_site_21815 iPseU_CNN:0;iRNA_PseU:0 21816 chr5 161317999 161317999 1 + C A BLCA 161317998 + 161317978 161318018 41 CCATGCATAATGACAGTGATTCTCTCACAAGTCTCCTTCTG CCATGCATAATGACAGTGATTATCTCACAAGTCTCCTTCTG < 41bp 0.53969710872093 0.866107031608321 0.28031492 0.41300166 prediction 0.652819845774782 Functional Gain - GABRA1 ENSG00000022355 CDS Human protein_coding chr5:161317998 chr5:161317999 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_28092 3 0 0 0 2 unknown 0.438682034333398 0.438732830461477 0 0 hPsi_site_21816 iPseU_CNN:0;iRNA_PseU:0 21817 chr19 1005531 1005531 1 + G A rs12973948 1005530 + 1005510 1005550 41 GGACAAGACCTTCGAGGAGCTGTCGGGGATCCACGACCCCA GGACAAGACCTTCGAGGAGCTATCGGGGATCCACGACCCCA < 41bp 0.428482809492573 0.826408598290813 0.26789328 0.6334774 prediction 0.652817196581627 Functional Gain - GRIN3B ENSG00000116032 CDS Human protein_coding chr19:1005530 chr19:1005531 synonymous SNV . 0 22 hPsi_associated_SNPs_28093 0 0 0 0 1 chromatin 0.438741423570562 0.438758098647912 0.2669548 0 hPsi_site_21817 iPseU_CNN:0.2669548;iRNA_PseU:0 21818 chr14 74961684 74961684 1 + C A UCEC 74961683 + 74961663 74961703 41 AAGGCTGCTCCTGTGGGTCATCTTTCTCTATCAAACTTTGA AAGGCTGCTCCTGTGGGTCATATTTCTCTATCAAACTTTGA < 41bp 0.526503726850901 0.852911491589123 0.22842029 0.32037207 prediction 0.652815529476444 Functional Gain - ISCA2 ENSG00000165898 CDS Human protein_coding chr14:74961683 chr14:74961684 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_28094 0 0 1 0 0 Ribosome 0.438718672600855 0.438631450408969 0 0 hPsi_site_21818 iPseU_CNN:0;iRNA_PseU:0 21819 chr12 81627215 81627215 1 + G A LUAD 81627214 + 81627194 81627234 41 GTGGATGATGTAATAAATGTTGCAGGTCACAGAATTTCTGC GTGGATGATGTAATAAATGTTACAGGTCACAGAATTTCTGC < 41bp 0.418561949080562 0.826403289467185 0.22207642 0.39547232 prediction 0.652806578934369 Functional Gain - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81627214 chr12:81627215 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28095 0 0 1 0 2 cytosol 0.437850158123273 0.439560800755265 0 0 hPsi_site_21819 iPseU_CNN:0;iRNA_PseU:0 21820 chr2 198327324 198327324 1 + C A SKCM 198327323 + 198327303 198327343 41 GAGGATTACAAGCATTTTGTTCCTTGGTGCAAAAAATCAGA GAGGATTACAAGCATTTTGTTACTTGGTGCAAAAAATCAGA < 41bp 0.48048696498345 0.826400611327858 0.32493126 0.7149211 prediction 0.652801222655716 Functional Gain - COQ10B ENSG00000115520 CDS Human protein_coding chr2:198327323 chr2:198327324 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28096 0 0 0 0 1 Ribosome 0.438718600713592 0.438719996973592 0.4298422 0 hPsi_site_21820 iPseU_CNN:0.4298422;iRNA_PseU:0 21821 chr2 177054729 177054729 1 + G A BLCA 177054728 + 177054708 177054748 41 CTGGTTCCAGAACCGCAGGATGAAACAGAAGAAAAGGGAAC CTGGTTCCAGAACCGCAGGATAAAACAGAAGAAAAGGGAAC < 41bp 0.568907500630698 0.895306999636291 0.26293492 0.6405933 prediction 0.652798998011187 Functional Gain - HOXD1 ENSG00000128645 CDS Human protein_coding chr2:177054728 chr2:177054729 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28097 0 0 0 2 0 exosome 0.438719458183104 0.438718613923054 0.2811866 0 hPsi_site_21821 iPseU_CNN:0.2811866;iRNA_PseU:0 21822 chr11 55595131 55595131 1 + C A UCEC 55595130 + 55595110 55595150 41 AGCTGCGTGTGGAGCTGACCTCTTGCTGCTACTTCTGTGGG AGCTGCGTGTGGAGCTGACCTATTGCTGCTACTTCTGTGGG < 41bp 0.529026888690997 0.855423141200452 0.28013977 0.627454 prediction 0.652792505018911 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595130 chr11:55595131 nonsynonymous SNV 0.004 2 22 hPsi_associated_SNPs_28098 0 0 0 0 0 unknown 0.438724165479023 0.438724744963067 0.254908 0 hPsi_site_21822 iPseU_CNN:0.254908;iRNA_PseU:0 21823 chr1 174417673 174417673 1 + G A ESCA 174417672 + 174417652 174417692 41 ATCAGTGTGGATCGTTATCTTGCAATAACCAAGCCTCTTTC ATCAGTGTGGATCGTTATCTTACAATAACCAAGCCTCTTTC < 41bp 0.453145285823674 0.826392473065264 0.45041385 0.7643717 prediction 0.652784946130529 Functional Gain - GPR52 ENSG00000203737 CDS Human protein_coding chr1:174417672 chr1:174417673 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28099 0 0 0 0 0 exosome 0.438717962703825 0.43863748251822 0.5287434 0 hPsi_site_21823 iPseU_CNN:0.5287434;iRNA_PseU:0 21824 chrX 30254648 30254648 1 + C A UCEC 30254647 + 30254627 30254667 41 AGGGGATTTCCCAAGACAGGTCTCCTGCTGAATCTCCTGGG AGGGGATTTCCCAAGACAGGTATCCTGCTGAATCTCCTGGG < 41bp 0.539934737638429 0.866319203170127 0.22173199 0.6405171 prediction 0.652768931063396 Functional Gain - MAGEB3 ENSG00000198798 CDS Human protein_coding chrX:30254647 chrX:30254648 nonsynonymous SNV 0.663 3 22 hPsi_associated_SNPs_28100 0 0 0 0 0 unknown 0.438718592995102 0.438741211317802 0.2810342 0 hPsi_site_21824 iPseU_CNN:0.2810342;iRNA_PseU:0 21825 chr11 134129579 134129579 1 + C A UCEC 134129578 + 134129558 134129598 41 AGGACCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAGA AGGACCAGGCCCCAAGGGCATATCATGCATAGTTGTTGAGA < 41bp 0.458760996288554 0.826382008922518 0.17574573 0.4336864 prediction 0.652764017845036 Functional Gain - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134129578 chr11:134129579 synonymous SNV . 0 22 hPsi_associated_SNPs_28101 0 0 1 0 2 Cytosol 0.438722687240481 0.438748081970978 0 0 hPsi_site_21825 iPseU_CNN:0;iRNA_PseU:0 21826 chr19 7712333 7712333 1 + G A COAD 7712332 + 7712312 7712352 41 TGTCATGGGCGGTGTGGCCATGTCAGAGATGAGGGCCGCCT TGTCATGGGCGGTGTGGCCATATCAGAGATGAGGGCCGCCT < 41bp 0.550003039731234 0.876381212070528 0.39847314 0.67879677 prediction 0.652756344678589 Functional Gain - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7712332 chr19:7712333 nonsynonymous SNV 0.963 2 22 hPsi_associated_SNPs_28102 0 0 1 1 2 chromatin 0.438850108150482 0.438642141903932 0.35759354 0 hPsi_site_21826 iPseU_CNN:0.35759354;iRNA_PseU:0 21827 chr17 41154751 41154751 1 + G T UCEC 41154750 + 41154730 41154770 41 AAGGATGTCTTCAGAGATCCTGCTCTTAAACGCAAGGCCCG AAGGATGTCTTCAGAGATCCTTCTCTTAAACGCAAGGCCCG < 41bp 0.487875906572606 0.826375445493631 0.19459432 0.3425702 prediction 0.652750890987261 Functional Gain - RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154750 chr17:41154751 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28103 0 0 1 0 2 Cytosol 0.438718592974734 0.438718592995119 0 0 hPsi_site_21827 iPseU_CNN:0;iRNA_PseU:0 21828 chr3 45943166 45943166 1 + G A UCEC 45943165 + 45943145 45943185 41 TGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCAC TGTGCCGTTTCCACCAACATTAACATCTGCTTCCAGGTCAC < 41bp 0.573170466505537 0.899545410608337 0.30435628 0.4029941 prediction 0.652749888205599 Functional Gain - CCR9 ENSG00000173585 CDS Human protein_coding chr3:45943165 chr3:45943166 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28104 0 0 0 0 0 exosome 0.438156570792541 0.438720933288113 0 0 hPsi_site_21828 iPseU_CNN:0;iRNA_PseU:0 21829 chr9 84608402 84608402 1 + C A ESCA 84608401 + 84608381 84608421 41 GGACCCTGAGAAGACAATTTTCTGATACTGACCATGACCTT GGACCCTGAGAAGACAATTTTATGATACTGACCATGACCTT < 41bp 0.480720241523816 0.826373635142602 0.20117444 0.2129493 prediction 0.652747270285205 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84608401 chr9:84608402 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_28105 0 0 0 0 0 exosome 0.438722042244177 0.438334670157486 0 0 hPsi_site_21829 iPseU_CNN:0;iRNA_PseU:0 21830 chr10 70673230 70673230 1 + C A GBM 70673229 + 70673209 70673249 41 CTGCAGAGTGGCCGATTGGATCTTTCTAAACTGCGACATGT CTGCAGAGTGGCCGATTGGATATTTCTAAACTGCGACATGT < 41bp 0.464604943806724 0.826373479599669 0.31308165 0.4448642 prediction 0.652746959199337 Functional Gain - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70673229 chr10:70673230 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28106 0 0 1 0 1 chromatin 0.438715989402255 0.438330272644568 0 0 hPsi_site_21830 iPseU_CNN:0;iRNA_PseU:0 21831 chr3 136574278 136574278 1 + G A HNSC 136574277 + 136574257 136574297 41 AGTTATCTCATTGCTATATGTGTCTGTTCTACTGCAGCATT AGTTATCTCATTGCTATATGTATCTGTTCTACTGCAGCATT < 41bp 0.431411481708181 0.826370798384009 0.25352973 0.30553836 prediction 0.652741596768019 Functional Gain - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136574277 chr3:136574278 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_28107 0 0 1 0 0 nucleolus 0.43813260621691 0.438707210969771 0 0 hPsi_site_21831 iPseU_CNN:0;iRNA_PseU:0 21832 chr1 158262441 158262441 1 + G T SKCM 158262440 + 158262420 158262460 41 CCTTGGGTCTGGCCAGCTGTTGCTGGTTTGTCATGCCTCCG CCTTGGGTCTGGCCAGCTGTTTCTGGTTTGTCATGCCTCCG < 41bp 0.503324851939185 0.829694238860688 0.3470574 0.6334613 prediction 0.652738773843006 Functional Gain - CD1C ENSG00000158481 CDS Human protein_coding chr1:158262440 chr1:158262441 nonsynonymous SNV 0.071 1 22 hPsi_associated_SNPs_28108 0 0 0 0 0 exosome 0.43871858126683 0.438735201900282 0.2669226 0 hPsi_site_21832 iPseU_CNN:0.2669226;iRNA_PseU:0 21833 chr19 17317517 17317517 1 + G A UCEC 17317516 + 17317496 17317536 41 GAGAAGCAGGAGCAGCTGGCTGCCATCTATGCCGTCCTGGA GAGAAGCAGGAGCAGCTGGCTACCATCTATGCCGTCCTGGA < 41bp 0.411855219160931 0.826359390515199 0.26054382 0.534806 prediction 0.652718781030398 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17317516 chr19:17317517 nonsynonymous SNV 0.964 3 22 hPsi_associated_SNPs_28109 0 0 1 0 0 Nucleus 0.438718100721463 0.43896674759539 0.069612 0 hPsi_site_21833 iPseU_CNN:0.069612;iRNA_PseU:0 21834 chr11 59245663 59245663 1 + G A SARC 59245662 + 59245642 59245682 41 TGACCCTGCATTTCGTGCCCTGCATCTATGTCTATGCCCGG TGACCCTGCATTTCGTGCCCTACATCTATGTCTATGCCCGG < 41bp 0.437026534949301 0.826358411744752 0.32165954 0.71012855 prediction 0.652716823489503 Functional Gain - OR4D10 ENSG00000254466 CDS Human protein_coding chr11:59245662 chr11:59245663 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28110 0 0 0 0 0 unknown 0.438441838361606 0.438673557398622 0.4202571 0 hPsi_site_21834 iPseU_CNN:0.4202571;iRNA_PseU:0 21835 chr11 102248796 102248796 1 + C A UCEC 102248795 + 102248775 102248815 41 TGTGTATGGACAAAGAAGTTTCTGTTGTATTTATTCCTTGT TGTGTATGGACAAAGAAGTTTATGTTGTATTTATTCCTTGT < 41bp 0.518626678224738 0.844984134745014 0.26767957 0.26118556 prediction 0.652714913040552 Functional Gain - BIRC2 ENSG00000110330 CDS Human protein_coding chr11:102248795 chr11:102248796 nonsynonymous SNV 0.974 4 22 hPsi_associated_SNPs_28111 0 0 1 0 1 Cytosol 0.438819888009704 0.438998134135941 0 0 hPsi_site_21835 iPseU_CNN:0;iRNA_PseU:0 21836 chr18 9396361 9396361 1 + C A COAD 9396360 + 9396340 9396380 41 CTGCATGAACCGATCCCTTCTCTCTTCCGGGCACTCACAGA CTGCATGAACCGATCCCTTCTATCTTCCGGGCACTCACAGA < 41bp 0.535049191772303 0.861405864274815 0.23565653 0.37964392 prediction 0.652713345005024 Functional Gain - TWSG1 ENSG00000128791 CDS Human protein_coding chr18:9396360 chr18:9396361 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28112 0 0 1 0 1 Ribosome 0.438712577297074 0.438845750554584 0 0 hPsi_site_21836 iPseU_CNN:0;iRNA_PseU:0 21837 chr1 233802591 233802591 1 + C A UCEC 233802590 + 233802570 233802610 41 CTTCTTCATCCCGGCCGCTGTCTTCTCAGTCCTGGAGGATG CTTCTTCATCCCGGCCGCTGTATTCTCAGTCCTGGAGGATG < 41bp 0.471079138862598 0.826355792253042 0.29913342 0.5939471 prediction 0.652711584506084 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802590 chr1:233802591 synonymous SNV . 0 22 hPsi_associated_SNPs_28113 0 0 1 0 0 Endoplasmic reticulum 0.438718590330752 0.438718585401939 0.1878942 0 hPsi_site_21837 iPseU_CNN:0.1878942;iRNA_PseU:0 21838 chr18 28934400 28934400 1 + C A UCEC 28934399 + 28934379 28934419 41 AGAAGACCTGGATGACAGCTTCTTGGATACCCTGGGACCTA AGAAGACCTGGATGACAGCTTATTGGATACCCTGGGACCTA < 41bp 0.530530314032793 0.856885746755105 0.43434796 0.6345023 prediction 0.652710865444622 Functional Gain - DSG1 ENSG00000134760 CDS Human protein_coding chr18:28934399 chr18:28934400 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_28114 0 0 0 0 0 unknown 0.438718592995133 0.438718591829193 0.2690046 0 hPsi_site_21838 iPseU_CNN:0.2690046;iRNA_PseU:0 21839 chr1 46715725 46715725 1 + G A rs114069917 46715724 + 46715704 46715744 41 CCAGATCCAGGAGTGTTTCCTGTCTCCTTTTCGGAAACCTT CCAGATCCAGGAGTGTTTCCTATCTCCTTTTCGGAAACCTT < 41bp 0.425135759296351 0.826353430255139 0.19891223 0.37919512 prediction 0.652706860510277 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46715724 chr1:46715725 synonymous SNV . 0 22 hPsi_associated_SNPs_28115 0 0 1 0 2 Ribosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_21839 iPseU_CNN:0;iRNA_PseU:0 21840 chr22 39127263 39127263 1 + G A rs550409069 39127262 + 39127242 39127282 41 GAGGGGCTTCTGGGATTTGGTGTCTGCTGCTGCCAGAGCAG GAGGGGCTTCTGGGATTTGGTATCTGCTGCTGCCAGAGCAG < 41bp 0.563105249160691 0.889456222724442 0.28001538 0.5982597 prediction 0.652701947127503 Functional Gain - GTPBP1 ENSG00000100226 UTR3 Human protein_coding chr22:39127262 chr22:39127263 . . 0 22 hPsi_associated_SNPs_28116 0 0 1 0 0 Ribosome 0.438716819829294 0.438718576634015 0.1965194 0 hPsi_site_21840 iPseU_CNN:0.1965194;iRNA_PseU:0 21841 chr16 67262275 67262275 1 + G A BLCA 67262274 + 67262254 67262294 41 GCAGGCCATTTACTGCCTTGTGACGTTGGTCTTCTTTTACT GCAGGCCATTTACTGCCTTGTAACGTTGGTCTTCTTTTACT < 41bp 0.571719009183861 0.898069809641175 0.2200431 0.674173 prediction 0.652701600914629 Functional Gain - TMEM208 ENSG00000168701 CDS Human protein_coding chr16:67262274 chr16:67262275 synonymous SNV . 0 22 hPsi_associated_SNPs_28117 0 0 1 0 2 Ribosome 0.43871859299595 0.438718586172062 0.348346 0 hPsi_site_21841 iPseU_CNN:0.348346;iRNA_PseU:0 21842 chr1 202156264 202156264 1 + C A rs558041068 202156263 + 202156243 202156283 41 TGGAAGGGCCCTTCAACATCTCTGAGTAAGTCCCAGCTTCC TGGAAGGGCCCTTCAACATCTATGAGTAAGTCCCAGCTTCC < 41bp 0.468707720710221 0.826344928702362 0.2250439 0.4279637 prediction 0.652689857404724 Functional Gain - PTPRVP ENSG00000243323 ncRNA_exonic Human processed_transcript chr1:202156263 chr1:202156264 . . 0 22 hPsi_associated_SNPs_28118 0 0 1 1 1 unknown 0.438641048973288 0.438741106727091 0 0 hPsi_site_21842 iPseU_CNN:0;iRNA_PseU:0 21843 chr9 135102334 135102334 1 + G A UCEC 135102333 + 135102313 135102353 41 CCGGCCCCGACTGCGGCAAGTGCAAGAAGAATTTCCGCACC CCGGCCCCGACTGCGGCAAGTACAAGAAGAATTTCCGCACC < 41bp 0.571365080759766 0.897703526602998 0.3007715 0.7214234 prediction 0.652676891686464 Functional Gain - NTNG2 ENSG00000196358 CDS Human protein_coding chr9:135102333 chr9:135102334 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_28119 0 0 0 0 2 exosome 0.438718592994953 0.438718592952514 0.4428468 0 hPsi_site_21843 iPseU_CNN:0.4428468;iRNA_PseU:0 21844 chr1 151535110 151535110 1 + C A UCEC 151535109 + 151535089 151535129 41 CCAGCCACTCAGCTGGTCATTCTCTGGCTTCAGAACTGGTG CCAGCCACTCAGCTGGTCATTATCTGGCTTCAGAACTGGTG < 41bp 0.550366033912032 0.8767015951195 0.55384016 0.65967095 prediction 0.652671122414935 Functional Gain - TUFT1 ENSG00000143367 CDS Human protein_coding chr1:151535109 chr1:151535110 nonsynonymous SNV 0.988 3 22 hPsi_associated_SNPs_28120 0 0 1 0 3 Ribosome 0.438718589050712 0.438718593874254 0.21166158 0 hPsi_site_21844 iPseU_CNN:0.21166158;iRNA_PseU:0 21845 chr3 100067771 100067771 1 + G A rs73862463 100067770 + 100067750 100067790 41 GCCTCTCGGCATGTCCTCTTTGTAGAAAGATTTCCGGTTGG GCCTCTCGGCATGTCCTCTTTATAGAAAGATTTCCGGTTGG < 41bp 0.539170648236992 0.865503285756594 0.46245167 0.51616234 prediction 0.652665275039203 Functional Gain - NIT2 ENSG00000114021 intronic Human protein_coding chr3:100067770 chr3:100067771 . . 0 22 hPsi_associated_SNPs_28121 0 0 1 0 0 Ribosome 0.438718592988331 0.438718592995101 0.0323246800000001 0 hPsi_site_21845 iPseU_CNN:0.0323246800000001;iRNA_PseU:0 21846 chr19 30021131 30021131 1 + G A rs376647357 30021130 + 30021110 30021150 41 ACCACCACAGTCGCGGCAGCTGCTGCTGCCTCGTCAGCGTC ACCACCACAGTCGCGGCAGCTACTGCTGCCTCGTCAGCGTC < 41bp 0.427147687446775 0.826319450832581 0.27271593 0.5062677 prediction 0.652638901665163 Functional Gain - VSTM2B ENSG00000187135 CDS Human protein_coding chr19:30021130 chr19:30021131 nonsynonymous SNV 0.778 0 22 hPsi_associated_SNPs_28122 0 0 0 0 1 exosome 0.438549055190855 0.438741600351044 0.0125354 0 hPsi_site_21846 iPseU_CNN:0.0125354;iRNA_PseU:0 21847 chr8 24771471 24771471 1 + C T rs200575013 24771472 - 24771452 24771492 41 AGCGAGGCGCGGGGCGAGCATGCTGCGCTTATAGGAGGAGG AGCGAGGCGCGGGGCGAGCATACTGCGCTTATAGGAGGAGG < 41bp 0.556773964122252 0.883089396112674 0.32730806 0.6059758 prediction 0.652630863980843 Functional Gain - NEFM ENSG00000104722 CDS Human protein_coding chr8:24771472 chr8:24771471 synonymous SNV . 0 22 hPsi_associated_SNPs_28123 0 0 0 0 0 exosome 0.438718616915843 0.438718608372919 0.2119516 0 hPsi_site_21847 iPseU_CNN:0.2119516;iRNA_PseU:0 21848 chr20 61428574 61428574 1 + G T HNSC 61428573 + 61428553 61428593 41 TCTGAGCACCATGTACGACATGCAGGCGCTGGTGAGCCCAA TCTGAGCACCATGTACGACATTCAGGCGCTGGTGAGCCCAA < 41bp 0.500685466352022 0.827000463807288 0.30912715 0.35112804 prediction 0.652629994910532 Functional Gain - MRGBP ENSG00000101189 CDS Human protein_coding chr20:61428573 chr20:61428574 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28124 0 0 1 0 1 Ribosome 0.4386415257729 0.438867809098305 0 0 hPsi_site_21848 iPseU_CNN:0;iRNA_PseU:0 21849 chr9 127996208 127996208 1 + G A BLCA 127996207 + 127996187 127996227 41 CTGTTTGGTGTTTGGTGGGATGAATACAGAAGGGGAAATCT CTGTTTGGTGTTTGGTGGGATAAATACAGAAGGGGAAATCT < 41bp 0.440085233299775 0.82630803012349 0.2305336 0.27310836 prediction 0.65261606024698 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127996207 chr9:127996208 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28125 0 0 1 1 0 Cytosol 0.438719781964265 0.438716871832382 0 0 hPsi_site_21849 iPseU_CNN:0;iRNA_PseU:0 21850 chr1 12089335 12089335 1 + G A LUSC 12089334 + 12089314 12089354 41 AGCGGCGTGGAGGAAGACCATGAATGTGAGTGCGGGCCCTC AGCGGCGTGGAGGAAGACCATAAATGTGAGTGCGGGCCCTC < 41bp 0.42555348302792 0.82630515073511 0.52237314 0.6435551 prediction 0.652610301470221 Functional Gain - MIIP ENSG00000116691 CDS Human protein_coding chr1:12089334 chr1:12089335 nonsynonymous SNV 0.915 0 22 hPsi_associated_SNPs_28126 0 0 1 0 2 chromatin 0.43877135800319 0.438718628444773 0.24236392 0 hPsi_site_21850 iPseU_CNN:0.24236392;iRNA_PseU:0 21851 chr14 24902184 24902184 1 + C A LUSC 24902183 + 24902163 24902203 41 TGTATTCCCTCAGCCTGCTCTCCCTCACACCCTCACGAGTC TGTATTCCCTCAGCCTGCTCTACCTCACACCCTCACGAGTC < 41bp 0.451771689518096 0.826304672990496 0.21607915 0.69934326 prediction 0.652609345980992 Functional Gain - KHNYN ENSG00000100441 CDS Human protein_coding chr14:24902183 chr14:24902184 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_28127 0 0 1 0 2 Cytosol 0.438721027621079 0.438728827811118 0.39868652 0 hPsi_site_21851 iPseU_CNN:0.39868652;iRNA_PseU:0 21852 chr2 155711698 155711698 1 + C A LUAD 155711697 + 155711677 155711717 41 CTAAAACCACCAAGATGTTATCTGATCCCATGAGCCAGTCT CTAAAACCACCAAGATGTTATATGATCCCATGAGCCAGTCT < 41bp 0.532526935341985 0.8588279667662 0.4322231 0.58904535 prediction 0.652602062848429 Functional Gain - KCNJ3 ENSG00000162989 CDS Human protein_coding chr2:155711697 chr2:155711698 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28128 0 0 0 2 0 exosome 0.438846415044524 0.438716355139188 0.1780907 0 hPsi_site_21852 iPseU_CNN:0.1780907;iRNA_PseU:0 21853 chr11 45923588 45923588 1 + C A LUSC 45923587 + 45923567 45923607 41 AGTTGGCAGGATCGGGTGTCTCGATCATCCTCACCCCTGAA AGTTGGCAGGATCGGGTGTCTAGATCATCCTCACCCCTGAA < 41bp 0.539955905206352 0.866256352152893 0.26781642 0.64837736 prediction 0.652600893893082 Functional Gain - MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923587 chr11:45923588 synonymous SNV . 0 22 hPsi_associated_SNPs_28129 0 0 0 0 2 Endoplasmic reticulum 0.438722481432764 0.438718592954803 0.29675472 0 hPsi_site_21853 iPseU_CNN:0.29675472;iRNA_PseU:0 21854 chr9 95599864 95599864 1 + C A LUSC 95599863 + 95599843 95599883 41 GGCACCGGCCACAGGCCCATTCATCTGCTCGTAGAATCTCC GGCACCGGCCACAGGCCCATTAATCTGCTCGTAGAATCTCC < 41bp 0.476150626922097 0.826297445954378 0.3369199 0.49123 prediction 0.652594891908757 Functional Gain - ANKRD19P ENSG00000187984;ENSG00000226721 ncRNA_exonic Human other chr9:95599863 chr9:95599864 . . 0 22 hPsi_associated_SNPs_28130 0 0 0 0 0 unknown 0.43871850336341 0.438718592971614 0 0 hPsi_site_21854 iPseU_CNN:0;iRNA_PseU:0 21855 chr14 90499453 90499453 1 + C A UCEC 90499452 + 90499432 90499472 41 TCCTCTGTGTGTCTGCAGGGTCTAGACAGTTTCAAAGTGAA TCCTCTGTGTGTCTGCAGGGTATAGACAGTTTCAAAGTGAA < 41bp 0.46986400494069 0.826297215017991 0.27114138 0.6110287 prediction 0.652594430035981 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90499452 chr14:90499453 nonsynonymous SNV 0.907 0 22 hPsi_associated_SNPs_28131 0 0 0 1 0 chromatin 0.43871947007614 0.43869922652115 0.2220574 0 hPsi_site_21855 iPseU_CNN:0.2220574;iRNA_PseU:0 21856 chr2 242695372 242695372 1 + G A CESC 242695371 + 242695351 242695391 41 CGGCTCTACGACATCGTGACTGACCTGCGCGCCCGCCTCGG CGGCTCTACGACATCGTGACTAACCTGCGCGCCCGCCTCGG < 41bp 0.412589603355822 0.826293774101884 0.33869535 0.6097485 prediction 0.652587548203768 Functional Gain - D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242695371 chr2:242695372 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_28132 0 0 1 0 0 Ribosome 0.438711057908016 0.438718653295077 0.219497 0 hPsi_site_21856 iPseU_CNN:0.219497;iRNA_PseU:0 21857 chr9 139983355 139983355 1 + G A BLCA 139983354 + 139983334 139983374 41 GCTAGAGGAAGAGCAGAAGATGAGGCCAGAAATTGCTGGGT GCTAGAGGAAGAGCAGAAGATAAGGCCAGAAATTGCTGGGT < 41bp 0.431787649917443 0.826286928224899 0.27849972 0.3011756 prediction 0.652573856449798 Functional Gain - MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:139983354 chr9:139983355 nonsynonymous SNV 0.052 0 22 hPsi_associated_SNPs_28133 0 0 1 1 1 Ribosome 0.438718592995108 0.438718592995102 0 0 hPsi_site_21857 iPseU_CNN:0;iRNA_PseU:0 21858 chr19 58371294 58371294 1 + C A UCEC 58371293 + 58371273 58371313 41 GGAAATCATTTCTTTCCAGCTCTGCGCTTCATGTTCATAAA GGAAATCATTTCTTTCCAGCTATGCGCTTCATGTTCATAAA < 41bp 0.483814032166527 0.826284532574467 0.35906285 0.47354084 prediction 0.652569065148935 Functional Gain - ZNF587 ENSG00000198466 CDS Human protein_coding chr19:58371293 chr19:58371294 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_28134 0 0 1 0 0 Nucleus 0.438704371993076 0.438695801168177 0 0 hPsi_site_21858 iPseU_CNN:0;iRNA_PseU:0 21859 chr14 20612213 20612213 1 + C A UCEC 20612212 + 20612192 20612232 41 CAGCTCTTTTTCTTGCATTTTCTTGGAGCGGGAGAGATGTT CAGCTCTTTTTCTTGCATTTTATTGGAGCGGGAGAGATGTT < 41bp 0.482366437749527 0.826279922124706 0.36819384 0.39889526 prediction 0.652559844249412 Functional Gain - OR4N5 ENSG00000184394 CDS Human protein_coding chr14:20612212 chr14:20612213 nonsynonymous SNV 0.429 0 22 hPsi_associated_SNPs_28135 0 0 0 0 0 unknown 0.438631764656905 0.396933280819041 0 0 hPsi_site_21859 iPseU_CNN:0;iRNA_PseU:0 21860 chr7 24689307 24689307 1 + C A COAD 24689306 + 24689286 24689326 41 CAAGCCCAGAAATGAATAATTCTTCTATCAATAATCAGTTA CAAGCCCAGAAATGAATAATTATTCTATCAATAATCAGTTA < 41bp 0.471312911186568 0.826269241079419 0.2389698 0.2576555 prediction 0.652538482158839 Functional Gain - MPP6 ENSG00000105926 CDS Human protein_coding chr7:24689306 chr7:24689307 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_28136 0 0 1 0 2 Cytosol 0.438717930685722 0.439211571088324 0 0 hPsi_site_21860 iPseU_CNN:0;iRNA_PseU:0 21861 chrX 26212939 26212939 1 + G A SKCM 26212938 + 26212918 26212958 41 GGGATCCTGCATTCAATCTATGGGGATGCTCGGAAGATCAT GGGATCCTGCATTCAATCTATAGGGATGCTCGGAAGATCAT < 41bp 0.439205434823209 0.826269107813505 0.2782342 0.33927566 prediction 0.652538215627009 Functional Gain - MAGEB6 ENSG00000176746 CDS Human protein_coding chrX:26212938 chrX:26212939 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_28137 0 0 0 0 0 unknown 0.438716459993012 0.438717681999434 0 0 hPsi_site_21861 iPseU_CNN:0;iRNA_PseU:0 21862 chr11 75113455 75113455 1 + G A UCEC 75113454 + 75113434 75113474 41 CATTGCCCAGGCAGAGTCTCTGCGTTACAAACTCCTAGGAG CATTGCCCAGGCAGAGTCTCTACGTTACAAACTCCTAGGAG < 41bp 0.403874260440891 0.826266464416034 0.19069669 0.27002695 prediction 0.652532928832067 Functional Gain - RPS3 ENSG00000149273 CDS Human protein_coding chr11:75113454 chr11:75113455 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_28138 0 0 1 0 2 Cytosol 0.438720670513561 0.438718616934293 0 0 hPsi_site_21862 iPseU_CNN:0;iRNA_PseU:0 21863 chr1 43308394 43308394 1 + C A READ 43308393 + 43308373 43308413 41 GGAGACAAGACCAAATGGATTCTTGGAGTATGTAGTGAGTC GGAGACAAGACCAAATGGATTATTGGAGTATGTAGTGAGTC < 41bp 0.527704449774877 0.853960856144317 0.29634917 0.32753748 prediction 0.652512812738879 Functional Gain - ERMAP ENSG00000164010 CDS Human protein_coding chr1:43308393 chr1:43308394 nonsynonymous SNV 0.889 1 22 hPsi_associated_SNPs_28139 0 0 1 0 0 chromatin 0.438699834878845 0.434002422072348 0 0 hPsi_site_21863 iPseU_CNN:0;iRNA_PseU:0 21864 chr21 40177325 40177325 1 + G A rs73450548 40177324 + 40177304 40177344 41 CAAGCCCGGCTGCCCTTCGGTGCCACCAGCACCACTGCTCC CAAGCCCGGCTGCCCTTCGGTACCACCAGCACCACTGCTCC < 41bp 0.529857180327267 0.8561128536891 0.24924234 0.6338259 prediction 0.652511346723665 Functional Gain - ETS2 ENSG00000157557 UTR5 Human protein_coding chr21:40177324 chr21:40177325 . . 0 22 hPsi_associated_SNPs_28140 0 0 0 0 0 Ribosome 0.438718592995128 0.438718592953181 0.2676518 0 hPsi_site_21864 iPseU_CNN:0.2676518;iRNA_PseU:0 21865 chr14 20612740 20612740 1 + G A SKCM 20612739 + 20612719 20612759 41 TACTGTCATCTTTCCTTTGATGAACCCTGTTATTTATACGC TACTGTCATCTTTCCTTTGATAAACCCTGTTATTTATACGC < 41bp 0.455248501919383 0.826252535540999 0.30309835 0.58398324 prediction 0.652505071081999 Functional Gain - OR4N5 ENSG00000184394 CDS Human protein_coding chr14:20612739 chr14:20612740 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28141 0 0 0 0 0 unknown 0.438723913773177 0.438732299081635 0.16796648 0 hPsi_site_21865 iPseU_CNN:0.16796648;iRNA_PseU:0 21866 chr7 156468416 156468416 1 + G A LGG 156468415 + 156468395 156468435 41 AGAAATCAGCCACCGCATCCTGTGCTCATACAACACCAACA AGAAATCAGCCACCGCATCCTATGCTCATACAACACCAACA < 41bp 0.559269828582884 0.885521879654328 0.1483379 0.27320582 prediction 0.652504102142888 Functional Gain - RNF32 ENSG00000105982 CDS Human protein_coding chr7:156468415 chr7:156468416 synonymous SNV . 0 22 hPsi_associated_SNPs_28142 0 0 0 0 1 Cytosol 0.438718382488565 0.438718532331162 0 0 hPsi_site_21866 iPseU_CNN:0;iRNA_PseU:0 21867 chr2 101188170 101188170 1 + C A GBM 101188169 + 101188149 101188189 41 CCCAATTATCCTGATAGGAATCTGCCCACGATATTTGTTTA CCCAATTATCCTGATAGGAATATGCCCACGATATTTGTTTA < 41bp 0.5235251422334 0.849776961577636 0.22150832 0.36594605 prediction 0.652503638688473 Functional Gain - PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101188169 chr2:101188170 nonsynonymous SNV 0.900 4 22 hPsi_associated_SNPs_28143 0 0 0 0 1 exosome 0.438718592971915 0.438718593001284 0 0 hPsi_site_21867 iPseU_CNN:0;iRNA_PseU:0 21868 chr1 20964612 20964612 1 + G A UCEC 20964611 + 20964591 20964631 41 CCTTGGCCATCAAGATGATGTGGAACATCTCGGTAAGCACC CCTTGGCCATCAAGATGATGTAGAACATCTCGGTAAGCACC < 41bp 0.417731661291016 0.826251558187385 0.45427462 0.66470337 prediction 0.652503116374771 Functional Gain - PINK1 ENSG00000158828 CDS Human protein_coding chr1:20964611 chr1:20964612 stopgain 1.000 1 22 hPsi_associated_SNPs_28144 0 0 0 0 1 Ribosome 0.438718593056455 0.438717020445241 0.32940674 0 hPsi_site_21868 iPseU_CNN:0.32940674;iRNA_PseU:0 21869 chr11 44098878 44098878 1 + G A rs79793705 44098877 + 44098857 44098897 41 TGGCGCTATCACACAGCACGTGTGTCTCTATGGCAACATCC TGGCGCTATCACACAGCACGTATGTCTCTATGGCAACATCC < 41bp 0.568393884896704 0.894642815148454 0.18081331 0.4091934 prediction 0.652497860503499 Functional Gain - ACCS ENSG00000110455 CDS Human protein_coding chr11:44098877 chr11:44098878 synonymous SNV . 0 22 hPsi_associated_SNPs_28145 0 0 0 2 3 chromatin 0.438704997583274 0.438630428568895 0 0 hPsi_site_21869 iPseU_CNN:0;iRNA_PseU:0 21870 chr16 56385392 56385392 1 + C A UCEC 56385391 + 56385371 56385411 41 CTCTTCCTCAACAAGAAAGATCTCTTTGGCGAGAAGATCAA CTCTTCCTCAACAAGAAAGATATCTTTGGCGAGAAGATCAA < 41bp 0.513266529222366 0.8395133209671 0.34143436 0.42154607 prediction 0.652493583489468 Functional Gain - GNAO1 ENSG00000087258 CDS Human protein_coding chr16:56385391 chr16:56385392 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28146 0 0 0 0 2 Endoplasmic reticulum 0.438718598308315 0.438718608698429 0 0 hPsi_site_21870 iPseU_CNN:0;iRNA_PseU:0 21871 chrX 48687890 48687890 1 + C A GBM 48687889 + 48687869 48687909 41 CTGTGATGGTGTGCTGGGCGTCTTCGCTCTCGATGACCCCT CTGTGATGGTGTGCTGGGCGTATTCGCTCTCGATGACCCCT < 41bp 0.541537224462707 0.86778340849827 0.34944665 0.72968316 prediction 0.652492368071126 Functional Gain - ERAS ENSG00000187682 CDS Human protein_coding chrX:48687889 chrX:48687890 synonymous SNV . 0 22 hPsi_associated_SNPs_28147 0 0 0 0 0 unknown 0.438735127607573 0.442577273399922 0.45936632 0 hPsi_site_21871 iPseU_CNN:0.45936632;iRNA_PseU:0 21872 chr22 39427766 39427766 1 + C A UCEC 39427765 + 39427745 39427785 41 GGTTCTGTGACGACATACTGTCTCCTAACACAAACTACGAG GGTTCTGTGACGACATACTGTATCCTAACACAAACTACGAG < 41bp 0.552222951007697 0.878462449341403 0.1694001 0.23089802 prediction 0.652478996667412 Functional Gain - APOBEC3D ENSG00000243811 CDS Human protein_coding chr22:39427765 chr22:39427766 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_28148 0 0 0 0 1 Nucleus 0.438718521164166 0.438722316745945 0 0 hPsi_site_21872 iPseU_CNN:0;iRNA_PseU:0 21873 chr13 21750537 21750537 1 + C A COAD 21750536 + 21750516 21750556 41 CTTTCCTCTCCGTCCAGCGCTCGCTGCAGCCGGGCCGTCTC CTTTCCTCTCCGTCCAGCGCTAGCTGCAGCCGGGCCGTCTC < 41bp 0.514226232563155 0.840460946742794 0.23330328 0.40040374 prediction 0.652469428359279 Functional Gain - SKA3 ENSG00000165480 CDS Human protein_coding chr13:21750536 chr13:21750537 nonsynonymous SNV 0.977 1 22 hPsi_associated_SNPs_28149 0 0 0 0 0 Cytosol 0.438849031176998 0.438724776758702 0 0 hPsi_site_21873 iPseU_CNN:0;iRNA_PseU:0 21874 chr19 37854193 37854193 1 + G A KIRC 37854192 + 37854172 37854212 41 CGGGGGAGAAGCCATTTGTATGTACGGAGTGTGGGCGAGGC CGGGGGAGAAGCCATTTGTATATACGGAGTGTGGGCGAGGC < 41bp 0.429234558595858 0.826228941560879 0.24582887 0.46095145 prediction 0.652457883121758 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854192 chr19:37854193 nonsynonymous SNV 0.334 4 22 hPsi_associated_SNPs_28150 0 0 1 0 0 exosome 0.438718592994018 0.438718592994957 0 0 hPsi_site_21874 iPseU_CNN:0;iRNA_PseU:0 21875 chr19 58905869 58905869 1 + C A ACC 58905868 + 58905848 58905888 41 CCTGCTGTCTTCCTAGGCCATCTGGCTGCTGTGCACAGGCG CCTGCTGTCTTCCTAGGCCATATGGCTGCTGTGCACAGGCG < 41bp 0.457066185683473 0.826227084117341 0.25024012 0.30473816 prediction 0.652454168234682 Functional Gain - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58905868 chr19:58905869 synonymous SNV . 0 22 hPsi_associated_SNPs_28151 0 0 1 0 2 Ribosome 0.438102555120237 0.432532687143029 0 0 hPsi_site_21875 iPseU_CNN:0;iRNA_PseU:0 21876 chr2 63824594 63824594 1 + G A rs376834475 63824593 + 63824573 63824613 41 CCTGGATGTGGCCATTCTTGTGGGCTCCATGCCAAGAAGGG CCTGGATGTGGCCATTCTTGTAGGCTCCATGCCAAGAAGGG < 41bp 0.5787163641275 0.904942615320267 0.28059775 0.5537946 prediction 0.652452502385534 Functional Gain - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63824593 chr2:63824594 stopgain . 0 22 hPsi_associated_SNPs_28152 0 0 1 0 1 Cytosol 0.438718555983129 0.438615893203969 0.1075892 0 hPsi_site_21876 iPseU_CNN:0.1075892;iRNA_PseU:0 21877 chr19 35434432 35434432 1 + G A HNSC 35434431 + 35434411 35434451 41 TGTGGGAAGGCCTTTATCAGTGGCTCAGCCTTTGTTAAGCA TGTGGGAAGGCCTTTATCAGTAGCTCAGCCTTTGTTAAGCA < 41bp 0.420486610518156 0.826226196052406 0.26358828 0.35302573 prediction 0.652452392104813 Functional Gain - ZNF30 ENSG00000168661 CDS Human protein_coding chr19:35434431 chr19:35434432 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28153 0 0 0 0 0 Cytosol 0.438718592896629 0.438718409520201 0 0 hPsi_site_21877 iPseU_CNN:0;iRNA_PseU:0 21878 chr12 113416527 113416527 1 + G A BLCA 113416526 + 113416506 113416546 41 GACACTGATCGACGAGATGGTGAACACCATCTGTGACGTCC GACACTGATCGACGAGATGGTAAACACCATCTGTGACGTCC < 41bp 0.418914920648688 0.826223561278095 0.22393253 0.79353774 prediction 0.65244712255619 Functional Gain - OAS2 ENSG00000111335 CDS Human protein_coding chr12:113416526 chr12:113416527 synonymous SNV . 0 22 hPsi_associated_SNPs_28154 0 0 0 0 1 exosome 0.438891457714008 0.437805531634239 0.58707548 0 hPsi_site_21878 iPseU_CNN:0.58707548;iRNA_PseU:0 21879 chr9 95375754 95375754 1 + C T rs540901325 95375755 - 95375735 95375775 41 TGTGGCCACCATGTCCAAGGTGGACTCGGTGTGAGGCTGCA TGTGGCCACCATGTCCAAGGTAGACTCGGTGTGAGGCTGCA < 41bp 0.497360266264026 0.826220933824567 0.4847898 0.74300426 prediction 0.652441867649134 Functional Gain - CENPP;IPPK ENSG00000127080;ENSG00000188312 UTR3 Human other chr9:95375755 chr9:95375754 . . 0 22 hPsi_associated_SNPs_28155 0 0 0 0 0 unknown 0.4386911637356 0.438742047304909 0.48600852 0 hPsi_site_21879 iPseU_CNN:0.48600852;iRNA_PseU:0 21880 chrX 106844429 106844429 1 + C A LUAD 106844428 + 106844408 106844448 41 CTCTCCCAACAAGAGGACAGTCTGCCTGTTCAAAATTTCCC CTCTCCCAACAAGAGGACAGTATGCCTGTTCAAAATTTCCC < 41bp 0.525875056248801 0.852091070169938 0.26489726 0.38414162 prediction 0.652432027842274 Functional Gain - FRMPD3 ENSG00000147234 CDS Human protein_coding chrX:106844428 chrX:106844429 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_28156 0 0 0 0 0 exosome 0.438718592788325 0.43871877830544 0 0 hPsi_site_21880 iPseU_CNN:0;iRNA_PseU:0 21881 chr16 68725736 68725736 1 + G T LUSC 68725735 + 68725715 68725755 41 CTGACGGTGATCAGGGCCACTGTGTGCGACTGCCATGGCCA CTGACGGTGATCAGGGCCACTTTGTGCGACTGCCATGGCCA < 41bp 0.510755070278598 0.836966383099589 0.26410013 0.37850264 prediction 0.652422625641982 Functional Gain - CDH3 ENSG00000062038 CDS Human protein_coding chr16:68725735 chr16:68725736 nonsynonymous SNV 0.819 1 22 hPsi_associated_SNPs_28157 0 0 0 0 1 Endoplasmic reticulum 0.438676769604683 0.438713160370766 0 0 hPsi_site_21881 iPseU_CNN:0;iRNA_PseU:0 21882 chr3 98073013 98073013 1 + C A UCEC 98073012 + 98072992 98073032 41 GCACAATTTTATTTTCTCTGTCTTGCTGAAACCACAGACTG GCACAATTTTATTTTCTCTGTATTGCTGAAACCACAGACTG < 41bp 0.49065954773335 0.826209636199391 0.38771427 0.7723032 prediction 0.652419272398782 Functional Gain - OR5K4 ENSG00000196098 CDS Human protein_coding chr3:98073012 chr3:98073013 nonsynonymous SNV 0.994 0 22 hPsi_associated_SNPs_28158 0 0 0 0 0 unknown 0.438712227749909 0.438698359561962 0.5446064 0 hPsi_site_21882 iPseU_CNN:0.5446064;iRNA_PseU:0 21883 chr11 55578984 55578984 1 + C A UCEC 55578983 + 55578963 55579003 41 CACTGTGGCTGAGTTCATTCTCCTTGGACTATCAGATGTCC CACTGTGGCTGAGTTCATTCTACTTGGACTATCAGATGTCC < 41bp 0.491648120588725 0.826207126415735 0.24780723 0.35693312 prediction 0.652414252831471 Functional Gain - OR5L1 ENSG00000186117 CDS Human other chr11:55578983 chr11:55578984 synonymous SNV . 0 22 hPsi_associated_SNPs_28159 0 0 0 0 0 unknown 0.438718560691298 0.438696914938029 0 0 hPsi_site_21883 iPseU_CNN:0;iRNA_PseU:0 21884 chr7 30649288 30649288 1 + C A LUAD 30649287 + 30649267 30649307 41 ACTGGAAATGATCTATCCCCTCCAGTGTCTTTTAACTTAAT ACTGGAAATGATCTATCCCCTACAGTGTCTTTTAACTTAAT < 41bp 0.468929365442666 0.826197698218659 0.39917672 0.39018032 prediction 0.652395396437318 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30649287 chr7:30649288 nonsynonymous SNV 0.386 4 22 hPsi_associated_SNPs_28160 0 0 1 0 2 Cytosol 0.438718412829481 0.438329634488155 0 0 hPsi_site_21884 iPseU_CNN:0;iRNA_PseU:0 QT interval 21885 chr2 63834025 63834025 1 + C A COAD 63834024 + 63834004 63834044 41 CTGGAAGTTTGTTGAAGGTCTCCCTATTAATGATTTCTCAC CTGGAAGTTTGTTGAAGGTCTACCTATTAATGATTTCTCAC < 41bp 0.483225537716464 0.826196543662137 0.15265507 0.23251504 prediction 0.652393087324275 Functional Gain - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834024 chr2:63834025 synonymous SNV . 0 22 hPsi_associated_SNPs_28161 0 0 1 0 1 Cytosol 0.438718593733283 0.438358477698402 0 0 hPsi_site_21885 iPseU_CNN:0;iRNA_PseU:0 21886 chr10 25312449 25312449 1 + G A UCEC 25312448 + 25312428 25312468 41 AAAAACCTGGAATATGAGTGTGTCTGAAAAATTACAGGATG AAAAACCTGGAATATGAGTGTATCTGAAAAATTACAGGATG < 41bp 0.558255074716548 0.884444437649332 0.27597147 0.61128837 prediction 0.652378725865568 Functional Gain - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25312448 chr10:25312449 synonymous SNV . 0 22 hPsi_associated_SNPs_28162 0 0 1 0 0 Cytosol 0.438718595508267 0.438718592799608 0.22257674 0 hPsi_site_21886 iPseU_CNN:0.22257674;iRNA_PseU:0 21887 chrX 48759769 48759769 1 + G A UCEC 48759768 + 48759748 48759788 41 CCACCATCGCCGGGAGGAGCTGGCTCCCTATCCCAAGAGCA CCACCATCGCCGGGAGGAGCTAGCTCCCTATCCCAAGAGCA < 41bp 0.440196994748544 0.826189223630826 0.16797164 0.33069456 prediction 0.652378447261651 Functional Gain - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759768 chrX:48759769 synonymous SNV . 0 22 hPsi_associated_SNPs_28163 0 0 1 0 1 Ribosome 0.438720753564758 0.43871859372775 0 0 hPsi_site_21887 iPseU_CNN:0;iRNA_PseU:0 21888 chr17 56271413 56271413 1 + G A SKCM 56271412 + 56271392 56271432 41 GGCTGTCGCTCCCCTTCGGCTGGACCCCCAGCAGGAGGCGC GGCTGTCGCTCCCCTTCGGCTAGACCCCCAGCAGGAGGCGC < 41bp 0.403008643570492 0.82618879077652 0.53308046 0.8724565 prediction 0.65237758155304 Functional Gain - EPX ENSG00000121053 CDS Human protein_coding chr17:56271412 chr17:56271413 stopgain 0.620 1 22 hPsi_associated_SNPs_28164 0 0 0 0 2 chromatin 0.438718592995102 0.438718435360271 0.67875208 0 hPsi_site_21888 iPseU_CNN:0.67875208;iRNA_PseU:0 21889 chr15 63571457 63571457 1 + C A ESCA 63571456 + 63571436 63571476 41 GATGGACCAACACAGAAATATCTGCTGATCTTTGGAGCGTT GATGGACCAACACAGAAATATATGCTGATCTTTGGAGCGTT < 41bp 0.532030400223868 0.858214946651924 0.30567902 0.34093323 prediction 0.652369092856112 Functional Gain - APH1B ENSG00000138613 CDS Human protein_coding chr15:63571456 chr15:63571457 nonsynonymous SNV 0.978 4 22 hPsi_associated_SNPs_28165 0 0 1 0 2 Endoplasmic reticulum 0.438718868200631 0.438742318815776 0 0 hPsi_site_21889 iPseU_CNN:0;iRNA_PseU:0 21890 chr1 244217379 244217379 1 + G A UCEC 244217378 + 244217358 244217398 41 GAAACTCCAGTTCAAAGACTTGCCCATTGAAGACGTGCTAG GAAACTCCAGTTCAAAGACTTACCCATTGAAGACGTGCTAG < 41bp 0.441478908020687 0.826182238553939 0.11066237 0.27305198 prediction 0.652364477107879 Functional Gain - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244217378 chr1:244217379 synonymous SNV . 0 22 hPsi_associated_SNPs_28166 0 0 1 0 0 Cytosol 0.438718582322739 0.438717814288629 0 0 hPsi_site_21890 iPseU_CNN:0;iRNA_PseU:0 21891 chr8 142432400 142432400 1 + C A LUSC 142432399 + 142432379 142432419 41 CTACAAACACATGCGCTTCCTCATCACCCACAACCCCACCA CTACAAACACATGCGCTTCCTAATCACCCACAACCCCACCA < 41bp 0.471334506069721 0.826175524648339 0.25497425 0.3713354 prediction 0.652351049296677 Functional Gain - PTP4A3 ENSG00000184489 CDS Human protein_coding chr8:142432399 chr8:142432400 synonymous SNV . 0 22 hPsi_associated_SNPs_28167 0 0 0 0 1 Cytosol 0.438707368782529 0.438712214564899 0 0 hPsi_site_21891 iPseU_CNN:0;iRNA_PseU:0 21892 chrX 47088572 47088572 1 + G A rs184270862 47088571 + 47088551 47088591 41 CTCAGACAAGATGGTGACAATGCCTTGAGTCTGAGGCATCC CTCAGACAAGATGGTGACAATACCTTGAGTCTGAGGCATCC < 41bp 0.446493660397615 0.826170827955497 0.26664907 0.33820271 prediction 0.652341655910995 Functional Gain - CDK16 ENSG00000102225 UTR3 Human protein_coding chrX:47088571 chrX:47088572 . . 0 22 hPsi_associated_SNPs_28168 0 0 1 1 0 Ribosome 0.438719789349987 0.438757444626523 0 0 hPsi_site_21892 iPseU_CNN:0;iRNA_PseU:0 21893 chr1 150936865 150936865 1 + C A UCEC 150936864 + 150936844 150936884 41 ACAGCCTTCTTCCCAACCCTTCTTGAACTGTCGTTTCCTCA ACAGCCTTCTTCCCAACCCTTATTGAACTGTCGTTTCCTCA < 41bp 0.534126080628229 0.860293557292934 0.29496938 0.36122322 prediction 0.65233495332941 Functional Gain - SETDB1 ENSG00000143418 CDS Human protein_coding chr1:150936864 chr1:150936865 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_28169 0 0 1 0 0 Nucleus 0.438718592805641 0.438718593046105 0 0 hPsi_site_21893 iPseU_CNN:0;iRNA_PseU:0 21894 chr17 41297009 41297009 1 + G A UCEC 41297008 + 41296988 41297028 41 GTCAGCTCCACCGAAGGGGCTGCCATGGAAGAGCCCAAGAG GTCAGCTCCACCGAAGGGGCTACCATGGAAGAGCCCAAGAG < 41bp 0.4483960577371 0.826164293122528 0.18806294 0.26644474 prediction 0.652328586245056 Functional Gain - NBR2 ENSG00000198496;ENSG00000267681 ncRNA_exonic Human other chr17:41297008 chr17:41297009 . . 0 22 hPsi_associated_SNPs_28170 0 0 0 0 0 unknown 0.438717795491242 0.438680379683073 0 0 hPsi_site_21894 iPseU_CNN:0;iRNA_PseU:0 21895 chr11 5906260 5906260 1 + C A UCEC 5906259 + 5906239 5906279 41 CAATACCTGTGGTTCTCATGTCTGTGTTATGCTGTGCTTTT CAATACCTGTGGTTCTCATGTATGTGTTATGCTGTGCTTTT < 41bp 0.515857713638911 0.842021702835099 0.2895052 0.49806264 prediction 0.652327978392376 Functional Gain - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5906259 chr11:5906260 synonymous SNV . 0 22 hPsi_associated_SNPs_28171 0 0 0 0 0 unknown 0.442157164696992 0.438947052041267 0 0 hPsi_site_21895 iPseU_CNN:0;iRNA_PseU:0 21896 chr8 120118343 120118343 1 + G A SKCM 120118342 + 120118322 120118362 41 CTATGGTCATGAGGACTGTGTGGAGATGCTGAGCTCTGGCA CTATGGTCATGAGGACTGTGTAGAGATGCTGAGCTCTGGCA < 41bp 0.427077781873684 0.826160872796454 0.2703562 0.56599796 prediction 0.652321745592908 Functional Gain - COLEC10 ENSG00000184374 CDS Human protein_coding chr8:120118342 chr8:120118343 synonymous SNV . 0 22 hPsi_associated_SNPs_28172 0 0 0 0 0 exosome 0.438718593468145 0.438685519889185 0.13199592 0 hPsi_site_21896 iPseU_CNN:0.13199592;iRNA_PseU:0 21897 chr10 88769446 88769446 1 + G A LUAD 88769445 + 88769425 88769465 41 ACATGGCTCCCGTGAGGAGGTGAACGAGACCTGTGGGGAGG ACATGGCTCCCGTGAGGAGGTAAACGAGACCTGTGGGGAGG < 41bp 0.450317242441179 0.826158048011937 0.28717887 0.63065374 prediction 0.652316096023873 Functional Gain - AGAP11 ENSG00000151303;ENSG00000261011;ENSG00000271880 ncRNA_exonic Human other chr10:88769445 chr10:88769446 . . 0 22 hPsi_associated_SNPs_28173 0 0 0 0 0 unknown 0.438440891504902 0.438668681863576 0.26130748 0 hPsi_site_21897 iPseU_CNN:0.26130748;iRNA_PseU:0 21898 chr16 2882081 2882081 1 + G A COAD 2882080 + 2882060 2882100 41 TCAAGAGCATTGGCTTTGAATGGAATTATCCACTAGAGGAG TCAAGAGCATTGGCTTTGAATAGAATTATCCACTAGAGGAG < 41bp 0.556177440179567 0.88233543183759 0.27933228 0.37330008 prediction 0.652315983316045 Functional Gain - ZG16B ENSG00000162078 CDS Human protein_coding chr16:2882080 chr16:2882081 stopgain 0.004 0 22 hPsi_associated_SNPs_28174 0 0 0 0 0 exosome 0.438718592995102 0.438718654270016 0 0 hPsi_site_21898 iPseU_CNN:0;iRNA_PseU:0 21899 chr22 31673087 31673087 1 + C A UCEC 31673086 + 31673066 31673106 41 CTCTGGCCTGCTGGACAAGATCCGGGCCATGCAGAAGCTGA CTCTGGCCTGCTGGACAAGATACGGGCCATGCAGAAGCTGA < 41bp 0.532049196466384 0.858207074884136 0.35152322 0.6478247 prediction 0.652315756835503 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31673086 chr22:31673087 synonymous SNV . 0 22 hPsi_associated_SNPs_28175 0 0 1 0 0 Cytosol 0.438718616853173 0.438718626159002 0.2956494 0 hPsi_site_21899 iPseU_CNN:0.2956494;iRNA_PseU:0 21900 chr10 90774000 90774000 1 + C A UCEC 90773999 + 90773979 90774019 41 TGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGA TGAGATCAAGAATGACAATGTACAAGACACAGCAGAACAGA < 41bp 0.514911265944624 0.841067512105263 0.3162871 0.86328053 prediction 0.652312492321277 Functional Gain - FAS ENSG00000026103 CDS Human protein_coding chr10:90773999 chr10:90774000 synonymous SNV . 0 22 hPsi_associated_SNPs_28176 0 0 1 0 0 exosome 0.439825431508242 0.440879623953995 0.72656106 0 hPsi_site_21900 iPseU_CNN:0.72656106;iRNA_PseU:0 21901 chr1 78482026 78482026 1 + G A rs141568969 78482025 + 78482005 78482045 41 ATGTGAATTCTGTATAAAGATGTGTAAATTCTTTTGAGGGT ATGTGAATTCTGTATAAAGATATGTAAATTCTTTTGAGGGT < 41bp 0.533029479483074 0.859180626023163 0.2815147 0.40218744 prediction 0.652302293080178 Functional Gain - DNAJB4 ENSG00000162616 UTR3 Human protein_coding chr1:78482025 chr1:78482026 . . 0 22 hPsi_associated_SNPs_28177 0 0 1 1 0 nucleoplasm 0.438718073319708 0.438718546373058 0 0 hPsi_site_21901 iPseU_CNN:0;iRNA_PseU:0 21902 chr1 109318983 109318983 1 + G A COAD 109318982 + 109318962 109319002 41 CTAGATAATGCCAGTAAGCTTGCACAGCTTGTTGAAAAAAA CTAGATAATGCCAGTAAGCTTACACAGCTTGTTGAAAAAAA < 41bp 0.442892220887353 0.826151136016316 0.28947687 0.3864707 prediction 0.652302272032631 Functional Gain - STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109318982 chr1:109318983 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28178 0 0 1 0 2 Nucleus 0.438477946188599 0.438704431165836 0 0 hPsi_site_21902 iPseU_CNN:0;iRNA_PseU:0 21903 chr7 150501953 150501953 1 + C A GBM 150501952 + 150501932 150501972 41 AATGTTGGAAGTGAGTGGAATCTAGCCATGCCTCTCCTGAT AATGTTGGAAGTGAGTGGAATATAGCCATGCCTCTCCTGAT < 41bp 0.507800504232515 0.833948844304163 0.27916843 0.32459542 prediction 0.652296680143296 Functional Gain - TMEM176A ENSG00000002933 CDS Human protein_coding chr7:150501952 chr7:150501953 synonymous SNV . 0 22 hPsi_associated_SNPs_28179 0 0 0 0 1 exosome 0.438718593065897 0.438718592992119 0 0 hPsi_site_21903 iPseU_CNN:0;iRNA_PseU:0 21904 chr5 135286957 135286957 1 + G A SKCM 135286956 + 135286936 135286976 41 TATTGATAGCATTCTTGTTTTGATAAGGTTTCTCCTGGCCC TATTGATAGCATTCTTGTTTTAATAAGGTTTCTCCTGGCCC < 41bp 0.560602503770378 0.886749750955382 0.3651414 0.47659346 prediction 0.652294494370009 Functional Gain - LECT2 ENSG00000145826 CDS Human protein_coding chr5:135286956 chr5:135286957 stopgain 0.985 0 22 hPsi_associated_SNPs_28180 0 0 1 0 0 membrane 0.438718593010039 0.438718593004577 0 0 hPsi_site_21904 iPseU_CNN:0;iRNA_PseU:0 21905 chr6 116758446 116758446 1 + C A UCEC 116758445 + 116758425 116758465 41 CAAAGATGTCTTTATGCAGTTCTTCTCATAGATAGCTGTAT CAAAGATGTCTTTATGCAGTTATTCTCATAGATAGCTGTAT < 41bp 0.492560131433079 0.82614674434938 0.2482481 0.447731 prediction 0.65229348869876 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116758445 chr6:116758446 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_28181 0 0 0 0 0 nucleolus 0.439279930917734 0.435379901622623 0 0 hPsi_site_21905 iPseU_CNN:0;iRNA_PseU:0 21906 chrX 64844912 64844912 1 + C A rs73629461 64844911 + 64844891 64844931 41 CTCTAACCTCCTTTTTAATTTCTTCTTTGACTCATTGGTTG CTCTAACCTCCTTTTTAATTTATTCTTTGACTCATTGGTTG < 41bp 0.507638187791218 0.83378405766743 0.24528438 0.21201733 prediction 0.652291739752424 Functional Gain - FRMD8P1;MSN ENSG00000147065 intronic Human protein_coding chrX:64844911 chrX:64844912 . . 0 22 hPsi_associated_SNPs_28182 0 0 0 0 0 unknown 0.438718748476851 0.438702569935657 0 0 hPsi_site_21906 iPseU_CNN:0;iRNA_PseU:0 21907 chr8 19813513 19813513 1 + C A COAD 19813512 + 19813492 19813532 41 AGAAAGAACCGCTGCAACAATCTGGGCTATGAGATCAATAA AGAAAGAACCGCTGCAACAATATGGGCTATGAGATCAATAA < 41bp 0.536508265164955 0.862652698139833 0.18056554 0.2578736 prediction 0.652288865949756 Functional Gain - LPL ENSG00000175445 CDS Human protein_coding chr8:19813512 chr8:19813513 nonsynonymous SNV 0.793 1 22 hPsi_associated_SNPs_28183 0 0 1 0 1 Endoplasmic reticulum 0.437510147042748 0.438718641502978 0 0 hPsi_site_21907 iPseU_CNN:0;iRNA_PseU:0 21908 chr9 127230827 127230827 1 + G A rs113085796 127230826 + 127230806 127230846 41 TGTGGCTGTCACAGTCGCAATGCACTTCCTCTTTCTGGTGG TGTGGCTGTCACAGTCGCAATACACTTCCTCTTTCTGGTGG < 41bp 0.412396243861562 0.826143846890252 0.3679016 0.7714201 prediction 0.652287693780503 Functional Gain - PSMB7;NR5A1 ENSG00000180264 CDS Human protein_coding chr9:127230826 chr9:127230827 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28184 0 0 0 6 0 unknown 0.438715995217052 0.438696971572129 0.5428402 0 hPsi_site_21908 iPseU_CNN:0.5428402;iRNA_PseU:0 21909 chr2 220136312 220136312 1 + C A HNSC 220136311 + 220136291 220136331 41 TGTCCTACCTCACATCCACTTCCCCCTGGCCACCTATGCAC TGTCCTACCTCACATCCACTTACCCCTGGCCACCTATGCAC < 41bp 0.523061074475719 0.849203497902346 0.13594523 0.46711323 prediction 0.652284846853253 Functional Gain - TUBA4B ENSG00000243910 ncRNA_exonic Human protein_coding chr2:220136311 chr2:220136312 . . 0 22 hPsi_associated_SNPs_28185 0 0 0 1 1 exosome 0.438720735186648 0.43837264212929 0 0 hPsi_site_21909 iPseU_CNN:0;iRNA_PseU:0 21910 chr1 110163638 110163638 1 + G A SKCM 110163637 + 110163617 110163657 41 CCGAGGTTGCCTAGACAACATGAGAAATCGTGGCCAGGGCC CCGAGGTTGCCTAGACAACATAAGAAATCGTGGCCAGGGCC < 41bp 0.432410602574085 0.826138879045543 0.290174 0.3080886 prediction 0.652277758091086 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110163637 chr1:110163638 nonsynonymous SNV 0.968 0 22 hPsi_associated_SNPs_28186 0 0 1 0 0 Cytosol 0.438718592993432 0.438718592995102 0 0 hPsi_site_21910 iPseU_CNN:0;iRNA_PseU:0 21911 chr1 29030747 29030747 1 + G A COAD 29030746 + 29030726 29030766 41 AGGAATAGCTGATGTAGGGCTGATGGAAGAGGTTGTCTGCA AGGAATAGCTGATGTAGGGCTAATGGAAGAGGTTGTCTGCA < 41bp 0.415386001847821 0.826129781109318 0.2139984 0.40327364 prediction 0.652259562218637 Functional Gain - GMEB1 ENSG00000162419 CDS Human protein_coding chr1:29030746 chr1:29030747 synonymous SNV . 0 22 hPsi_associated_SNPs_28187 0 0 1 0 2 Ribosome 0.438758148519146 0.438716103357377 0 0 hPsi_site_21911 iPseU_CNN:0;iRNA_PseU:0 21912 chr6 130762329 130762329 1 + C A UCEC 130762328 + 130762308 130762348 41 CTCTGACAGCTCTGTGTCTGTCTTTGGCCTCTATCCACCTC CTCTGACAGCTCTGTGTCTGTATTTGGCCTCTATCCACCTC < 41bp 0.451884393304119 0.826128187782981 0.47993022 0.65416676 prediction 0.652256375565961 Functional Gain - TMEM200A ENSG00000164484 CDS Human protein_coding chr6:130762328 chr6:130762329 synonymous SNV . 0 22 hPsi_associated_SNPs_28188 0 0 0 0 0 exosome 0.438718319117806 0.438717089451185 0.30833352 0 hPsi_site_21912 iPseU_CNN:0.30833352;iRNA_PseU:0 21913 chr3 20142845 20142845 1 + G T GBM 20142844 + 20142824 20142864 41 AAAGAAAGGCAAACAATAGTTGAGTTGGCAAAAATGTTCCT AAAGAAAGGCAAACAATAGTTTAGTTGGCAAAAATGTTCCT < 41bp 0.505359621216651 0.83147928116601 0.7974115 0.9379767 prediction 0.652239319898718 Functional Gain - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20142844 chr3:20142845 stopgain 0.698 1 22 hPsi_associated_SNPs_28189 0 0 0 0 0 Cytosol 0.439236274359791 0.438721731275225 0.2811304 0 hPsi_site_21913 iPseU_CNN:0.2811304;iRNA_PseU:0 21914 chr19 53945985 53945985 1 + G A rs138630406 53945984 + 53945964 53946004 41 GGAAGGCTGCTTTCTCCTTTTGCCACCCCCTCCTTCCCTGC GGAAGGCTGCTTTCTCCTTTTACCACCCCCTCCTTCCCTGC < 41bp 0.545818297293193 0.871934078463591 0.3012082 0.6897059 prediction 0.652231562340795 Functional Gain - TPM3P9 ENSG00000241015 ncRNA_exonic Human transcribed_processed_pseudogene chr19:53945984 chr19:53945985 . . 0 22 hPsi_associated_SNPs_28190 0 0 1 0 0 unknown 0.438718593055982 0.438718593075918 0.3794118 0 hPsi_site_21914 iPseU_CNN:0.3794118;iRNA_PseU:0 21915 chr16 31474111 31474111 1 + C A UCEC 31474110 + 31474090 31474130 41 CAGGCTCTGGGACTTGTGCCTCTCCTGGCTGGGCAGCTGTG CAGGCTCTGGGACTTGTGCCTATCCTGGCTGGGCAGCTGTG < 41bp 0.461567712182458 0.826103470506015 0.30810842 0.5295723 prediction 0.65220694101203 Functional Gain - ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31474110 chr16:31474111 nonsynonymous SNV 0.981 2 22 hPsi_associated_SNPs_28191 0 0 1 0 1 cytosol 0.438718584239428 0.438737255366605 0.0591446 0 hPsi_site_21915 iPseU_CNN:0.0591446;iRNA_PseU:0 21916 chr19 46832484 46832484 1 + G A SKCM 46832483 + 46832463 46832503 41 GGATGCTGATGCTCTGGATTTGGAGATGCTGGCCCCCTACA GGATGCTGATGCTCTGGATTTAGAGATGCTGGCCCCCTACA < 41bp 0.578541274528226 0.904641368886504 0.3025449 0.41859758 prediction 0.652200188716555 Functional Gain - HIF3A ENSG00000124440 CDS Human protein_coding chr19:46832483 chr19:46832484 synonymous SNV . 0 22 hPsi_associated_SNPs_28192 0 0 0 0 1 Nucleus 0.438718916239769 0.438722974025446 0 0 hPsi_site_21916 iPseU_CNN:0;iRNA_PseU:0 21917 chr3 35779788 35779788 1 + C A UCEC 35779787 + 35779767 35779807 41 CCCAGCACCTCCTACCTGTGTCTCCAACGCAGCACTTTCCC CCCAGCACCTCCTACCTGTGTATCCAACGCAGCACTTTCCC < 41bp 0.485929959040676 0.826096283001411 0.22952744 0.26440975 prediction 0.652192566002822 Functional Gain - ARPP21 ENSG00000172995 CDS Human protein_coding chr3:35779787 chr3:35779788 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_28193 0 0 0 0 2 Nucleus 0.438718592995657 0.438732109764052 0 0 hPsi_site_21917 iPseU_CNN:0;iRNA_PseU:0 21918 chr18 28993509 28993509 1 + C A BLCA 28993508 + 28993488 28993528 41 GCTCCACATCCCCCATGACATCTCGACACAGAGTAACACGA GCTCCACATCCCCCATGACATATCGACACAGAGTAACACGA < 41bp 0.469418238738687 0.826090958126876 0.2372326 0.32529774 prediction 0.652181916253753 Functional Gain - DSG4 ENSG00000175065 CDS Human protein_coding chr18:28993508 chr18:28993509 nonsynonymous SNV 0.888 1 22 hPsi_associated_SNPs_28194 0 0 0 0 0 exosome 0.438560277580426 0.438689923053867 0 0 hPsi_site_21918 iPseU_CNN:0;iRNA_PseU:0 21919 chr17 34893667 34893667 1 + C A UCEC 34893666 + 34893646 34893686 41 TGGAGTTCACTGGAACTTTTTCTTTACCATAATAGTTGTGA TGGAGTTCACTGGAACTTTTTATTTACCATAATAGTTGTGA < 41bp 0.51962257544083 0.845711174298326 0.1577597 0.1941748 prediction 0.652177197714993 Functional Gain - PIGW ENSG00000184886 CDS Human other chr17:34893666 chr17:34893667 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28195 0 0 1 0 0 Ribosome 0.43884271284562 0.438479412404364 0 0 hPsi_site_21919 iPseU_CNN:0;iRNA_PseU:0 21920 chr2 27306515 27306515 1 + G A STAD 27306514 + 27306494 27306534 41 CATTTCTGAGATTAACAGGCTGCAGCAGGAGGCCACAGAGC CATTTCTGAGATTAACAGGCTACAGCAGGAGGCCACAGAGC < 41bp 0.573122552700783 0.89920923245763 0.31801635 0.3846747 prediction 0.652173359513694 Functional Gain - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27306514 chr2:27306515 synonymous SNV . 0 22 hPsi_associated_SNPs_28196 0 0 0 0 0 Cytosol 0.439604329030986 0.440209122376932 0 0 hPsi_site_21920 iPseU_CNN:0;iRNA_PseU:0 21921 chr1 12009904 12009904 1 + G A CESC 12009903 + 12009883 12009923 41 AGGGCAGAAGGTCCGGCTGCTGAAGAAAGCTCTGGAGAAGC AGGGCAGAAGGTCCGGCTGCTAAAGAAAGCTCTGGAGAAGC < 41bp 0.412601587596372 0.826082826744331 0.27314103 0.5961843 prediction 0.652165653488662 Functional Gain - PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009903 chr1:12009904 synonymous SNV . 0 22 hPsi_associated_SNPs_28197 0 0 1 0 2 Nucleus 0.438717746966603 0.438716499082299 0.1923686 0 hPsi_site_21921 iPseU_CNN:0.1923686;iRNA_PseU:0 21922 chr5 112228080 112228080 1 + G A COAD 112228079 + 112228059 112228099 41 CCTAGATTTCTATGAGGATGTGTTGCCCGAGTTCAAGAACG CCTAGATTTCTATGAGGATGTATTGCCCGAGTTCAAGAACG < 41bp 0.551872278382305 0.877949903990193 0.21421903 0.49383 prediction 0.652155251215775 Functional Gain - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112228079 chr5:112228080 synonymous SNV . 0 22 hPsi_associated_SNPs_28198 0 0 0 0 0 Ribosome 0.438718559853072 0.438718114741839 0 0 hPsi_site_21922 iPseU_CNN:0;iRNA_PseU:0 21923 chr12 4385346 4385346 1 + G A SKCM 4385345 + 4385325 4385365 41 CGCTGACCGCGGAGAAGCTGTGCATTTACACCGACAACTCC CGCTGACCGCGGAGAAGCTGTACATTTACACCGACAACTCC < 41bp 0.580707663078238 0.906782057607183 0.48726463 0.80859524 prediction 0.652148789057889 Functional Gain - CCND2 ENSG00000118971 CDS Human protein_coding chr12:4385345 chr12:4385346 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28199 0 0 1 0 1 Ribosome 0.438721216783641 0.438718560681842 0.61719048 0 hPsi_site_21923 iPseU_CNN:0.61719048;iRNA_PseU:0 21924 chr6 35258046 35258046 1 + C A UCEC 35258045 + 35258025 35258065 41 TCAAGACTTTTCCCCCAGGTTCTTCATGACAGCCAGATTCC TCAAGACTTTTCCCCCAGGTTATTCATGACAGCCAGATTCC < 41bp 0.466909375806775 0.826069109927003 0.3255043 0.65768147 prediction 0.652138219854007 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35258045 chr6:35258046 nonsynonymous SNV 0.778 0 22 hPsi_associated_SNPs_28200 0 0 1 0 1 Cytosol 0.438714801104368 0.438634042227647 0.31536294 0 hPsi_site_21924 iPseU_CNN:0.31536294;iRNA_PseU:0 21925 chr2 220439863 220439863 1 + G A PRAD 220439862 + 220439842 220439882 41 GCTCAACTCCCCTGATGTCCTGGCCTTGGTCTCCCTCTGCT GCTCAACTCCCCTGATGTCCTAGCCTTGGTCTCCCTCTGCT < 41bp 0.416084363116384 0.826065750409287 0.23086596 0.39772052 prediction 0.652131500818575 Functional Gain - INHA ENSG00000123999 CDS Human protein_coding chr2:220439862 chr2:220439863 stopgain 0.665 0 22 hPsi_associated_SNPs_28201 0 0 0 0 0 cytosol 0.438718571305364 0.438747473468074 0 0 hPsi_site_21925 iPseU_CNN:0;iRNA_PseU:0 21926 chr7 76062905 76062905 1 + G A READ 76062904 + 76062884 76062924 41 GTTGTTTGTGGACCACTGCGTGGCCACACCGACACCAGACC GTTGTTTGTGGACCACTGCGTAGCCACACCGACACCAGACC < 41bp 0.397511220195018 0.826065142834302 0.29045475 0.67824495 prediction 0.652130285668604 Functional Gain - ZP3 ENSG00000188372 CDS Human protein_coding chr7:76062904 chr7:76062905 synonymous SNV . 0 22 hPsi_associated_SNPs_28202 0 0 0 0 1 Ribosome 0.439319093024054 0.434372447532401 0.3564899 0 hPsi_site_21926 iPseU_CNN:0.3564899;iRNA_PseU:0 21927 chr5 40681899 40681899 1 + C A PAAD 40681898 + 40681878 40681918 41 CCGCATCGCGGGCGCCGAGATCCAGATGGTCATCTTACTCA CCGCATCGCGGGCGCCGAGATACAGATGGTCATCTTACTCA < 41bp 0.530015098636374 0.856079728911348 0.21399125 0.42878234 prediction 0.652129260549948 Functional Gain - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681898 chr5:40681899 synonymous SNV . 0 22 hPsi_associated_SNPs_28203 0 0 0 0 1 Cytosol 0.438734270244287 0.438671518163171 0 0 hPsi_site_21927 iPseU_CNN:0;iRNA_PseU:0 21928 chr12 54369071 54369071 1 + G T LUAD 54369070 + 54369050 54369090 41 TATCAACAAAGAGAAGCGGCTGCAGCTGTCCCGGATGCTGA TATCAACAAAGAGAAGCGGCTTCAGCTGTCCCGGATGCTGA < 41bp 0.497589283043324 0.826054932665315 0.3375194 0.6193173 prediction 0.652109865330631 Functional Gain - HOXC11 ENSG00000123388 CDS Human protein_coding chr12:54369070 chr12:54369071 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28204 0 0 1 0 0 exosome 0.438341004073576 0.438722417667264 0.2386346 0 hPsi_site_21928 iPseU_CNN:0.2386346;iRNA_PseU:0 21929 chr9 104324267 104324267 1 + C A UCEC 104324266 + 104324246 104324286 41 GTACCCAAGTGTGATGAGATTCTGATGGAAGAGATTAAGGA GTACCCAAGTGTGATGAGATTATGATGGAAGAGATTAAGGA < 41bp 0.475289723826606 0.826052271293391 0.36888853 0.51812935 prediction 0.652104542586783 Functional Gain - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104324266 chr9:104324267 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28205 0 0 1 0 2 nucleus 0.438735896428452 0.438722543852492 0.0362587000000001 0 hPsi_site_21929 iPseU_CNN:0.0362587000000001;iRNA_PseU:0 21930 chr17 39261898 39261898 1 + G A OV 39261897 + 39261877 39261917 41 CTACCGCCCCAGCTGTTGTGTGTCCAGCTGCTGCAGGCCCC CTACCGCCCCAGCTGTTGTGTATCCAGCTGCTGCAGGCCCC < 41bp 0.56826707875913 0.894319306714743 0.32862204 0.50167215 prediction 0.652104455911225 Functional Gain - KRTAP4-9 ENSG00000212722 CDS Human protein_coding chr17:39261897 chr17:39261898 synonymous SNV . 0 22 hPsi_associated_SNPs_28206 0 0 0 0 0 unknown 0.438718594715974 0.438718592996147 0.00334429999999997 0 hPsi_site_21930 iPseU_CNN:0.00334429999999997;iRNA_PseU:0 21931 chr12 52470983 52470983 1 + G A rs184663914 52470982 + 52470962 52471002 41 CCTTGCCCTCTGAGCGTCGCTGGATCTCTGGGAGCTCCTTG CCTTGCCCTCTGAGCGTCGCTAGATCTCTGGGAGCTCCTTG < 41bp 0.563517779762604 0.889566773083576 0.26203188 0.3397885 prediction 0.652097986641944 Functional Gain - ATG101 ENSG00000257663 ncRNA_exonic Human antisense chr12:52470982 chr12:52470983 . . 0 22 hPsi_associated_SNPs_28207 0 0 1 2 0 Ribosome 0.438718562494551 0.43871803056562 0 0 hPsi_site_21931 iPseU_CNN:0;iRNA_PseU:0 21932 chr11 34478296 34478296 1 + G A CESC 34478295 + 34478275 34478315 41 GTTAATTACTTTGCTGAGGTTGAACAGATAGCCTTCGACCC GTTAATTACTTTGCTGAGGTTAAACAGATAGCCTTCGACCC < 41bp 0.574142581227059 0.900182917973383 0.30784613 0.63441414 prediction 0.652080673492649 Functional Gain - CAT ENSG00000121691 CDS Human protein_coding chr11:34478295 chr11:34478296 nonsynonymous SNV 0.978 5 22 hPsi_associated_SNPs_28208 0 0 1 0 2 Ribosome 0.438771193748773 0.438722376936636 0.26882828 0 hPsi_site_21932 iPseU_CNN:0.26882828;iRNA_PseU:0 21933 chr17 48434547 48434547 1 + G A BLCA 48434546 + 48434526 48434566 41 AGAGACGCTTGAGATGTGGCTGATGCCCCAAGGGTCGCTGA AGAGACGCTTGAGATGTGGCTAATGCCCCAAGGGTCGCTGA < 41bp 0.569909957211148 0.895943077631728 0.23250395 0.78486073 prediction 0.65206624084116 Functional Gain - XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48434546 chr17:48434547 synonymous SNV . 0 22 hPsi_associated_SNPs_28209 0 0 0 0 1 nucleolus 0.438506609802757 0.438886380159116 0.56972146 0 hPsi_site_21933 iPseU_CNN:0.56972146;iRNA_PseU:0 21934 chr1 177250216 177250216 1 + G A SKCM 177250215 + 177250195 177250235 41 CTATCACCTTGGGGAATAGGTGGAAGACTTTCTTTGAGACA CTATCACCTTGGGGAATAGGTAGAAGACTTTCTTTGAGACA < 41bp 0.438459321661521 0.826030343005145 0.23523098 0.58282924 prediction 0.65206068601029 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177250215 chr1:177250216 stopgain 1.000 1 22 hPsi_associated_SNPs_28210 0 0 0 0 0 Nucleus 0.438718592995099 0.438718592995174 0.16565848 0 hPsi_site_21934 iPseU_CNN:0.16565848;iRNA_PseU:0 21935 chr6 160328623 160328623 1 + G A SKCM 160328622 + 160328602 160328642 41 GTCCAGCACCATCTTGGTCGTGAAGATCCGGAAGAACACGT GTCCAGCACCATCTTGGTCGTAAAGATCCGGAAGAACACGT < 41bp 0.424327622215007 0.826019550802792 0.24351683 0.62449914 prediction 0.652039101605584 Functional Gain - MAS1 ENSG00000130368 CDS Human protein_coding chr6:160328622 chr6:160328623 synonymous SNV . 0 22 hPsi_associated_SNPs_28211 0 0 0 0 0 exosome 0.438729056422691 0.439156838857251 0.24899828 0 hPsi_site_21935 iPseU_CNN:0.24899828;iRNA_PseU:0 21936 chr8 97311924 97311924 1 + C A LUAD 97311923 + 97311903 97311943 41 GGGCTCTTGTGTTTCTCAGCTCTTCTTCATGCATCTCCTCC GGGCTCTTGTGTTTCTCAGCTATTCTTCATGCATCTCCTCC < 41bp 0.534169970148154 0.860183731291876 0.27216855 0.39534453 prediction 0.652027522287444 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97311923 chr8:97311924 synonymous SNV . 0 22 hPsi_associated_SNPs_28212 0 0 1 0 1 Ribosome 0.43877984202956 0.441497311671979 0 0 hPsi_site_21936 iPseU_CNN:0;iRNA_PseU:0 21937 chr2 219674398 219674398 1 + G T THYM 219674397 + 219674377 219674417 41 CCCGCTCTTGGAGCAAGTGATGCGGCAAGAGGGCAAGTACC CCCGCTCTTGGAGCAAGTGATTCGGCAAGAGGGCAAGTACC < 41bp 0.487489378558292 0.826012825935308 0.20248398 0.3413067 prediction 0.652025651870616 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219674397 chr2:219674398 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28213 0 0 1 0 2 cytosol 0.438718592995077 0.438718592995102 0 0 hPsi_site_21937 iPseU_CNN:0;iRNA_PseU:0 21938 chr11 6807123 6807123 1 + G A OV 6807122 + 6807102 6807142 41 CACAATTGTCACTCCAGCCCTGAATCCACTCATCTACAGCC CACAATTGTCACTCCAGCCCTAAATCCACTCATCTACAGCC < 41bp 0.440918728222467 0.826012349373833 0.270935 0.49615192 prediction 0.652024698747666 Functional Gain - OR2AG1 ENSG00000170803 CDS Human other chr11:6807122 chr11:6807123 synonymous SNV . 0 22 hPsi_associated_SNPs_28214 0 0 0 0 0 unknown 0.439533595941804 0.438923555370035 0 0 hPsi_site_21938 iPseU_CNN:0;iRNA_PseU:0 21939 chr10 69926194 69926194 1 + C A UCEC 69926193 + 69926173 69926213 41 AAACCCAAACTCGAGGGGGTTCTGGTGAACCACAATGAGCC AAACCCAAACTCGAGGGGGTTATGGTGAACCACAATGAGCC < 41bp 0.458411679620861 0.826009511700458 0.6856531 0.64517415 prediction 0.652019023400916 Functional Gain - MYPN ENSG00000138347 CDS Human protein_coding chr10:69926193 chr10:69926194 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28215 0 0 0 0 0 Cytosol 0.43871862258037 0.438717790325391 0 0 hPsi_site_21939 iPseU_CNN:0;iRNA_PseU:0 21940 chr20 36030912 36030912 1 + G A LIHC 36030911 + 36030891 36030931 41 TCGTGCAGCCAACATCCTGGTGGGAGAGAACCTGGTGTGCA TCGTGCAGCCAACATCCTGGTAGGAGAGAACCTGGTGTGCA < 41bp 0.392968394790907 0.826007383766874 0.21776175 0.6521116 prediction 0.652014767533748 Functional Gain - SRC ENSG00000197122 CDS Human protein_coding chr20:36030911 chr20:36030912 synonymous SNV . 0 22 hPsi_associated_SNPs_28216 0 0 1 0 2 Ribosome 0.438717778267935 0.43871856201009 0.3042232 0 hPsi_site_21940 iPseU_CNN:0.3042232;iRNA_PseU:0 21941 chr22 31492832 31492832 1 + G A HNSC 31492831 + 31492811 31492851 41 AGGCACAGCCAGCGGGCAGCTGATGGCTCTGCTGTCAGCAC AGGCACAGCCAGCGGGCAGCTAATGGCTCTGCTGTCAGCAC < 41bp 0.414584838581996 0.8260056800023 0.27773708 0.6060917 prediction 0.652011360004601 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31492831 chr22:31492832 nonsynonymous SNV 0.846 3 22 hPsi_associated_SNPs_28217 0 0 1 0 0 Cytosol 0.438825417666586 0.43839894233722 0.2121834 0 hPsi_site_21941 iPseU_CNN:0.2121834;iRNA_PseU:0 21942 chr4 1332899 1332899 1 + G A UCEC 1332898 + 1332878 1332918 41 GTCAAGATGATAAAGTCGTGTGCCCGAGAACCAAAGAAGTC GTCAAGATGATAAAGTCGTGTACCCGAGAACCAAAGAAGTC < 41bp 0.563993397933237 0.889997555235594 0.18039644 0.63166827 prediction 0.652008314604715 Functional Gain - MAEA ENSG00000090316 CDS Human protein_coding chr4:1332898 chr4:1332899 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_28218 0 0 1 1 1 Cytosol 0.438849357702863 0.438685372063396 0.26333654 0 hPsi_site_21942 iPseU_CNN:0.26333654;iRNA_PseU:0 21943 chr1 155582319 155582319 1 + G A rs137939767 155582318 + 155582298 155582338 41 CTTGGGTGGGAGCCTGGGCCTGCGACCCGAGCCACCTGTCA CTTGGGTGGGAGCCTGGGCCTACGACCCGAGCCACCTGTCA < 41bp 0.578318396731743 0.904320496253489 0.33919236 0.71431714 prediction 0.652004199043492 Functional Gain - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582318 chr1:155582319 synonymous SNV . 0 22 hPsi_associated_SNPs_28219 0 0 1 0 1 Ribosome 0.438718607315797 0.438718543281629 0.42863428 0 hPsi_site_21943 iPseU_CNN:0.42863428;iRNA_PseU:0 21944 chr1 70899609 70899609 1 + G A BLCA 70899608 + 70899588 70899628 41 AAGGGCACTCTTCAGCATGCTGAGATTTTCCTCAAGAACCT AAGGGCACTCTTCAGCATGCTAAGATTTTCCTCAAGAACCT < 41bp 0.422057541900253 0.825992645095794 0.26640788 0.40601802 prediction 0.651985290191587 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70899608 chr1:70899609 nonsynonymous SNV 0.591 1 22 hPsi_associated_SNPs_28220 0 0 1 0 2 Cytosol 0.438679499346349 0.438898551178638 0 0 hPsi_site_21944 iPseU_CNN:0;iRNA_PseU:0 21945 chr20 42089804 42089804 1 + G A rs117799664 42089803 + 42089783 42089823 41 CTTCTGCAAGAGGAATCTCTTGAAAACAGGGGCACACAGAA CTTCTGCAAGAGGAATCTCTTAAAAACAGGGGCACACAGAA < 41bp 0.450369464665052 0.825987534464019 0.26448178 0.34060758 prediction 0.651975068928038 Functional Gain - SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42089803 chr20:42089804 . . 0 22 hPsi_associated_SNPs_28221 0 0 1 0 0 Nucleus 0.438718550903129 0.438718589813434 0 0 hPsi_site_21945 iPseU_CNN:0;iRNA_PseU:0 21946 chr4 109578730 109578730 1 + C A UCEC 109578729 + 109578709 109578749 41 CCAAAACTCAATAGATTCCTTCTTCTGTTCATTGGATTCGT CCAAAACTCAATAGATTCCTTATTCTGTTCATTGGATTCGT < 41bp 0.524290706872154 0.850277827115066 0.33012223 0.3394449 prediction 0.651974240485822 Functional Gain - OSTC ENSG00000198856 CDS Human protein_coding chr4:109578729 chr4:109578730 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_28222 0 0 1 0 1 Ribosome 0.4389421403592 0.438526116204201 0 0 hPsi_site_21946 iPseU_CNN:0;iRNA_PseU:0 21947 chr6 55120104 55120104 1 + G A SKCM 55120103 + 55120083 55120123 41 GATTCCTCAGGCCATCGTCATGGAGTGCAGCACCGTGTTCC GATTCCTCAGGCCATCGTCATAGAGTGCAGCACCGTGTTCC < 41bp 0.412989480827843 0.825983626434877 0.1990546 0.32603782 prediction 0.651967252869753 Functional Gain - HCRTR2 ENSG00000137252 CDS Human protein_coding chr6:55120103 chr6:55120104 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28223 0 0 0 0 1 unknown 0.438155884761289 0.439381978488129 0 0 hPsi_site_21947 iPseU_CNN:0;iRNA_PseU:0 21948 chr19 50361877 50361877 1 + G A BLCA 50361876 + 50361856 50361896 41 CACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCA CACCAAGGACCTGGAGACACTAAAGAGCCTGTGCCGGATCA < 41bp 0.417648666517464 0.825981500680426 0.24289626 0.26022893 prediction 0.651963001360853 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50361876 chr19:50361877 synonymous SNV . 0 22 hPsi_associated_SNPs_28224 0 0 1 0 2 Ribosome 0.438718592995115 0.438718594164014 0 0 hPsi_site_21948 iPseU_CNN:0;iRNA_PseU:0 21949 chr4 188924123 188924123 1 + G A BLCA 188924122 + 188924102 188924142 41 GGCCTTATGTGATGGCTATGTGTGCTATGAGCCTGGCCCTC GGCCTTATGTGATGGCTATGTATGCTATGAGCCTGGCCCTC < 41bp 0.416180548149507 0.825974078533773 0.5122284 0.5078517 prediction 0.651948157067546 Functional Gain - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924122 chr4:188924123 synonymous SNV . 0 22 hPsi_associated_SNPs_28225 0 0 0 0 0 Nucleus 0.438718553748011 0.438718586734538 0 0 hPsi_site_21949 iPseU_CNN:0;iRNA_PseU:0 21950 chr17 61759191 61759191 1 + G A UCEC 61759190 + 61759170 61759210 41 CCTGAGCGGCAGCAGCACATTGCCCGGCAGGGGTCCTACAC CCTGAGCGGCAGCAGCACATTACCCGGCAGGGGTCCTACAC < 41bp 0.39562122818401 0.825972293569971 0.23251405 0.7005254 prediction 0.651944587139943 Functional Gain - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61759190 chr17:61759191 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28226 0 0 0 0 2 Cytosol 0.43871869212864 0.438718297807521 0.4010508 0 hPsi_site_21950 iPseU_CNN:0.4010508;iRNA_PseU:0 21951 chr5 177632984 177632984 1 + G A KIRP 177632983 + 177632963 177633003 41 AAGAGGGTTTGGGTTTATCCTGTTCAAAGATGCAGCCAGTG AAGAGGGTTTGGGTTTATCCTATTCAAAGATGCAGCCAGTG < 41bp 0.413398650802317 0.825971790859241 0.15602568 0.1779423 prediction 0.651943581718481 Functional Gain - HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177632983 chr5:177632984 synonymous SNV . 0 22 hPsi_associated_SNPs_28227 0 0 1 0 1 Cytosol 0.438718578288052 0.438718591679419 0 0 hPsi_site_21951 iPseU_CNN:0;iRNA_PseU:0 21952 chr19 42728670 42728670 1 + G A BLCA 42728669 + 42728649 42728689 41 GAGATGTCAACAGAAGTGACTGAGATGACACCTGGGGAGGC GAGATGTCAACAGAAGTGACTAAGATGACACCTGGGGAGGC < 41bp 0.423409194612789 0.825969300736003 0.20768392 0.39725494 prediction 0.651938601472006 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728669 chr19:42728670 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_28228 0 0 1 0 0 Cytosol 0.438563947459504 0.438718989975553 0 0 hPsi_site_21952 iPseU_CNN:0;iRNA_PseU:0 21953 chr19 607984 607984 1 + G A rs3752158 607983 + 607963 608003 41 GAACCACTCGTGGAGTGAACTGTACTCCTTCGCACTCTTCA GAACCACTCGTGGAGTGAACTATACTCCTTCGCACTCTTCA < 41bp 0.57316320159375 0.899130992302151 0.52417725 0.6981477 prediction 0.651935581416803 Functional Gain - HCN2 ENSG00000099822 CDS Human protein_coding chr19:607983 chr19:607984 synonymous SNV . 0 22 hPsi_associated_SNPs_28229 0 0 0 0 1 chromatin 0.392163738442273 0.315535868621899 0.3479409 0 hPsi_site_21953 iPseU_CNN:0.3479409;iRNA_PseU:0 21954 chr5 76028788 76028788 1 + G A rs139693607 76028787 + 76028767 76028807 41 CAAGGAGCAAACCATCCAGGTGCCCGGGCTCAACATCACTA CAAGGAGCAAACCATCCAGGTACCCGGGCTCAACATCACTA < 41bp 0.429183586397847 0.825950644340878 0.13627428 0.5955957 prediction 0.651901288681757 Functional Gain - F2R ENSG00000181104 CDS Human protein_coding chr5:76028787 chr5:76028788 synonymous SNV . 0 22 hPsi_associated_SNPs_28230 0 0 0 0 0 Endoplasmic reticulum 0.44104416959895 0.437994850478195 0.1911914 0 hPsi_site_21954 iPseU_CNN:0.1911914;iRNA_PseU:0 21955 chr5 226082 226082 1 + G A LUSC 226081 + 226061 226101 41 GGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCA GGTGGACAGAGCCTCAAGTTTAGAAAGGGCGGGCAGGCCCA < 41bp 0.580751426860915 0.906700679489555 0.3192299 0.7057929 prediction 0.651898505257281 Functional Gain - SDHA ENSG00000073578 CDS Human protein_coding chr5:226081 chr5:226082 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28231 0 0 1 0 1 Nucleus 0.43871859295647 0.438718592827342 0.4115858 0 hPsi_site_21955 iPseU_CNN:0.4115858;iRNA_PseU:0 21956 chr15 45436389 45436389 1 + G A rs139081430 45436388 + 45436368 45436408 41 TTCGTCCTGTCCAGCAACCGTGGACGCCGCACTCTGCTGCT TTCGTCCTGTCCAGCAACCGTAGACGCCGCACTCTGCTGCT < 41bp 0.406961638661656 0.825940043767454 0.2575023 0.5977392 prediction 0.651880087534908 Functional Gain - DUOX1 ENSG00000137857 CDS Human protein_coding chr15:45436388 chr15:45436389 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_28232 0 0 0 0 1 chromatin 0.438691116543579 0.43885923478302 0.1954784 0 hPsi_site_21956 iPseU_CNN:0.1954784;iRNA_PseU:0 21957 chr3 127395867 127395867 1 + G A COAD 127395866 + 127395846 127395886 41 GTGAGCGCCTGGCCAAGCAATGCCAGCTGTGGGACCTGCTC GTGAGCGCCTGGCCAAGCAATACCAGCTGTGGGACCTGCTC < 41bp 0.58140974321665 0.907341602191433 0.2547543 0.32662833 prediction 0.651863717949566 Functional Gain - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127395866 chr3:127395867 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28233 0 0 1 0 1 exosome 0.438728900399325 0.438715827111495 0 0 hPsi_site_21957 iPseU_CNN:0;iRNA_PseU:0 21958 chr14 76091013 76091013 1 + G T READ 76091012 + 76090992 76091032 41 CCAATCCCTGAGCTATGCCTTGACCTCTCCTGATGCCTCAT CCAATCCCTGAGCTATGCCTTTACCTCTCCTGATGCCTCAT < 41bp 0.507852075619179 0.833781294954455 0.24220255 0.6248679 prediction 0.651858438670553 Functional Gain - FLVCR2 ENSG00000119686 CDS Human protein_coding chr14:76091012 chr14:76091013 nonsynonymous SNV 0.977 0 22 hPsi_associated_SNPs_28234 0 0 0 0 1 Cytosol 0.438705511663212 0.438730104435527 0.2497358 0 hPsi_site_21958 iPseU_CNN:0.2497358;iRNA_PseU:0 21959 chr1 87208010 87208010 1 + C A GBM 87208009 + 87207989 87208029 41 CAAGTGGCCTAGTAATCACCTCTCCTTCCAACCTCAGTGAC CAAGTGGCCTAGTAATCACCTATCCTTCCAACCTCAGTGAC < 41bp 0.549104561180055 0.875032984345062 0.22238716 0.71208024 prediction 0.651856846330012 Functional Gain - SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208009 chr1:87208010 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_28235 0 0 1 0 0 Ribosome 0.438718592992809 0.438718592826246 0.42416048 0 hPsi_site_21959 iPseU_CNN:0.42416048;iRNA_PseU:0 21960 chr20 62187428 62187428 1 + G A ESCA 62187427 + 62187407 62187447 41 GAACAGCTCGACCATGGCCGTGCTGAGCTGGATGCCCTGCT GAACAGCTCGACCATGGCCGTACTGAGCTGGATGCCCTGCT < 41bp 0.579517430844324 0.905444464371473 0.5437861 0.9120933 prediction 0.651854067054298 Functional Gain - FNDC11 ENSG00000125531 CDS Human protein_coding chr20:62187427 chr20:62187428 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_28236 0 0 0 0 0 exosome 0.438333588799919 0.439602145183517 0.7366144 0 hPsi_site_21960 iPseU_CNN:0.7366144;iRNA_PseU:0 21961 chr9 140638462 140638462 1 + G A UCEC 140638461 + 140638441 140638481 41 GAGGAGGACGACGGCCATGGTGCAGAGCAGGCGGCCGCGTT GAGGAGGACGACGGCCATGGTACAGAGCAGGCGGCCGCGTT < 41bp 0.397585979090082 0.825923323074796 0.42554763 0.7166678 prediction 0.651846646149591 Functional Gain - EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140638461 chr9:140638462 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_28237 0 0 1 0 1 chromatin 0.438718543168274 0.438718599428944 0.4333356 0 hPsi_site_21961 iPseU_CNN:0.4333356;iRNA_PseU:0 21962 chr14 105396385 105396385 1 + G A SKCM 105396384 + 105396364 105396404 41 GCACTCCAAATTCTGGGTTGTGGATGGACGGCACATATACA GCACTCCAAATTCTGGGTTGTAGATGGACGGCACATATACA < 41bp 0.401553789858011 0.825923306168793 0.2166022 0.38522857 prediction 0.651846612337585 Functional Gain - PLD4 ENSG00000166428 CDS Human protein_coding chr14:105396384 chr14:105396385 synonymous SNV . 0 22 hPsi_associated_SNPs_28238 0 0 0 0 2 exosome 0.4387185402143 0.438726771014312 0 0 hPsi_site_21962 iPseU_CNN:0;iRNA_PseU:0 21963 chr12 101017690 101017690 1 + C A LUAD 101017689 + 101017669 101017709 41 TAATCTGGGCTCTATGTCAGTCCGTTCTAAATTGCCAAATT TAATCTGGGCTCTATGTCAGTACGTTCTAAATTGCCAAATT < 41bp 0.467985883615294 0.825920937119656 0.23209906 0.33898845 prediction 0.651841874239313 Functional Gain - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101017689 chr12:101017690 synonymous SNV . 0 22 hPsi_associated_SNPs_28239 0 0 0 0 0 Cytosol 0.438718543581693 0.437829739239146 0 0 hPsi_site_21963 iPseU_CNN:0;iRNA_PseU:0 21964 chr7 100205276 100205276 1 + G A LUSC 100205275 + 100205255 100205295 41 CACAGTGGTGACTGCGACAGTGAAGTCCATGGTTCGGGAGC CACAGTGGTGACTGCGACAGTAAAGTCCATGGTTCGGGAGC < 41bp 0.417138527612539 0.825909688462502 0.60021657 0.572343 prediction 0.651819376925005 Functional Gain - PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205275 chr7:100205276 synonymous SNV . 0 22 hPsi_associated_SNPs_28240 0 0 1 0 1 Endoplasmic reticulum 0.439057789262015 0.438718059812007 0 0 hPsi_site_21964 iPseU_CNN:0;iRNA_PseU:0 21965 chrX 101826363 101826363 1 + C A UCEC 101826362 + 101826342 101826382 41 CCTCTAGACCGAAGGCAAGATCTCAGTGGAGGCCTTCAAGC CCTCTAGACCGAAGGCAAGATATCAGTGGAGGCCTTCAAGC < 41bp 0.479524458789245 0.825909183858929 0.26895824 0.29776627 prediction 0.651818367717858 Functional Gain - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101826362 chrX:101826363 . . 0 22 hPsi_associated_SNPs_28241 0 0 0 0 1 unknown 0.438718592917703 0.438658594980755 0 0 hPsi_site_21965 iPseU_CNN:0;iRNA_PseU:0 21966 chr2 73479988 73479988 1 + G A CESC 73479987 + 73479967 73480007 41 GTGGTCGTGGCCGCCCCCACTGAGAGGCACCCCACCCATCA GTGGTCGTGGCCGCCCCCACTAAGAGGCACCCCACCCATCA < 41bp 0.426829206218388 0.825908799264746 0.31563288 0.5625062 prediction 0.651817598529493 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73479987 chr2:73479988 synonymous SNV . 0 22 hPsi_associated_SNPs_28242 0 0 1 0 0 Cytosol 0.438554477163496 0.438722607887306 0.1250124 0 hPsi_site_21966 iPseU_CNN:0.1250124;iRNA_PseU:0 21967 chr12 50035727 50035727 1 + G A LGG 50035726 + 50035706 50035746 41 GTGGAGGTGAACACGGCCTTTGAGGACTTCGCCCACGTCAT GTGGAGGTGAACACGGCCTTTAAGGACTTCGCCCACGTCAT < 41bp 0.58233825701198 0.908244700398722 0.2544229 0.3710931 prediction 0.651812886773485 Functional Gain - PRPF40B ENSG00000110844 CDS Human protein_coding chr12:50035726 chr12:50035727 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_28243 0 0 1 0 2 Cytosol 0.438664420997594 0.43871870559513 0 0 hPsi_site_21967 iPseU_CNN:0;iRNA_PseU:0 21968 chr9 95869981 95869981 1 + G A rs74414352 95869980 + 95869960 95870000 41 GACCTATTGTGACCGCCTGGTGCAGGACACGCCTTTCCTGA GACCTATTGTGACCGCCTGGTACAGGACACGCCTTTCCTGA < 41bp 0.573556800933403 0.899458840123035 0.40056676 0.9642766 prediction 0.651804078379265 Functional Gain - CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869980 chr9:95869981 synonymous SNV . 0 22 hPsi_associated_SNPs_28244 0 0 1 0 1 Ribosome 0.438718592995131 0.438718592995159 0.9285532 0 hPsi_site_21968 iPseU_CNN:0.9285532;iRNA_PseU:0 21969 chr19 13869703 13869703 1 + C A GBM 13869702 + 13869682 13869722 41 GTTCCGGATGAAATGCCACCTCTGTGTCAACTACATCGAGA GTTCCGGATGAAATGCCACCTATGTGTCAACTACATCGAGA < 41bp 0.546101389080087 0.872003265458917 0.324727 0.5272066 prediction 0.651803752757659 Functional Gain - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869702 chr19:13869703 synonymous SNV . 0 22 hPsi_associated_SNPs_28245 0 0 1 0 1 Cytosol 0.435010848895672 0.437198682507577 0.0544131999999999 0 hPsi_site_21969 iPseU_CNN:0.0544131999999999;iRNA_PseU:0 21970 chr21 40847120 40847120 1 + G A LUSC 40847119 + 40847099 40847139 41 TATTTATTCCTTCCTTGGTTTGGCTCCTCCTCCAGACTCAA TATTTATTCCTTCCTTGGTTTAGCTCCTCCTCCAGACTCAA < 41bp 0.424800005267466 0.82590054830163 0.36222923 0.80257386 prediction 0.651801096603261 Functional Gain - SH3BGR;WRB-SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40847119 chr21:40847120 synonymous SNV . 0 22 hPsi_associated_SNPs_28246 0 0 0 0 2 unknown 0.438718592995102 0.438718592994467 0.60514772 0 hPsi_site_21970 iPseU_CNN:0.60514772;iRNA_PseU:0 21971 chr2 74043295 74043295 1 + G A LUSC 74043294 + 74043274 74043314 41 AAAAAGATCGATATGAAAACTGGATTCTCTTCCTCCAGGAC AAAAAGATCGATATGAAAACTAGATTCTCTTCCTCCAGGAC < 41bp 0.571982865762011 0.897882240181127 0.6153125 0.7679136 prediction 0.651798748838232 Functional Gain - C2orf78 ENSG00000187833 CDS Human protein_coding chr2:74043294 chr2:74043295 nonsynonymous SNV 0.031 1 22 hPsi_associated_SNPs_28247 0 0 0 0 0 unknown 0.43872399938976 0.438269293986924 0.3052022 0 hPsi_site_21971 iPseU_CNN:0.3052022;iRNA_PseU:0 21972 chr1 21799965 21799965 1 + C A PRAD 21799964 + 21799944 21799984 41 ATAGCCACCACCCTTGTGAGTCCAACCAGCCTTACGGGAAC ATAGCCACCACCCTTGTGAGTACAACCAGCCTTACGGGAAC < 41bp 0.456945957928083 0.825894736094718 0.20808244 0.5433932 prediction 0.651789472189436 Functional Gain - NBPF3 ENSG00000142794 CDS Human protein_coding chr1:21799964 chr1:21799965 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_28248 0 0 1 0 1 nucleus 0.438718592994402 0.43871861180628 0.0867864 0 hPsi_site_21972 iPseU_CNN:0.0867864;iRNA_PseU:0 21973 chr8 24253276 24253276 1 + C A COAD 24253275 + 24253255 24253295 41 ACATCCTAAATGAAAAGAATTCTGTTGCCAGCATCAGTACT ACATCCTAAATGAAAAGAATTATGTTGCCAGCATCAGTACT < 41bp 0.533253153374642 0.859139695845956 0.322558 0.35671905 prediction 0.651773084942628 Functional Gain - ADAMDEC1 ENSG00000134028 CDS Human protein_coding chr8:24253275 chr8:24253276 nonsynonymous SNV 0.637 4 22 hPsi_associated_SNPs_28249 0 0 0 0 2 exosome 0.438726229680696 0.43871859332161 0 0 hPsi_site_21973 iPseU_CNN:0;iRNA_PseU:0 21974 chr15 41106171 41106171 1 + G A CESC 41106170 + 41106150 41106190 41 GTGGACCCCAGGCCTGAGGCTGAGGAAGAGGAGCTCCCCTG GTGGACCCCAGGCCTGAGGCTAAGGAAGAGGAGCTCCCCTG < 41bp 0.400910560349093 0.825886064170671 0.28329384 0.3479673 prediction 0.651772128341343 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41106170 chr15:41106171 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_28250 0 0 1 0 2 Ribosome 0.438718482601671 0.438718586961551 0 0 hPsi_site_21974 iPseU_CNN:0;iRNA_PseU:0 21975 chr4 71888154 71888154 1 + C A COAD 71888153 + 71888133 71888173 41 ATGAGAAACCTGAACGATGGTCTTTTACCTTCCAAACATAT ATGAGAAACCTGAACGATGGTATTTTACCTTCCAAACATAT < 41bp 0.469737793406899 0.825884892932261 0.32162496 0.61239445 prediction 0.651769785864522 Functional Gain - DCK ENSG00000156136 CDS Human protein_coding chr4:71888153 chr4:71888154 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28251 0 0 1 0 1 Cytosol 0.438718593866933 0.438718593040602 0.2247889 0 hPsi_site_21975 iPseU_CNN:0.2247889;iRNA_PseU:0 21976 chr10 76982087 76982087 1 + G A UCEC 76982086 + 76982066 76982106 41 ACACTTCAGTAAACCTTGCTTGGACATCAGGTACCAACTGC ACACTTCAGTAAACCTTGCTTAGACATCAGGTACCAACTGC < 41bp 0.413005659031389 0.825882732170128 0.21198085 0.5260992 prediction 0.651765464340257 Functional Gain - VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76982086 chr10:76982087 stopgain 1.000 1 22 hPsi_associated_SNPs_28252 0 0 0 0 2 Ribosome 0.438719190576902 0.438622971829184 0.0521984 0 hPsi_site_21976 iPseU_CNN:0.0521984;iRNA_PseU:0 21977 chr20 1281299 1281299 1 + G T PRAD 1281298 + 1281278 1281318 41 CCCCCTGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAG CCCCCTGCAGCAGAAGGAGGTTTGCATCCGGCACCTGAAAG < 41bp 0.504472667668937 0.83035360129388 0.31580067 0.4809287 prediction 0.651761867249886 Functional Gain - SNPH ENSG00000101298 CDS Human protein_coding chr20:1281298 chr20:1281299 synonymous SNV . 0 22 hPsi_associated_SNPs_28253 0 0 0 0 2 Endoplasmic reticulum 0.438718428965531 0.438718594030795 0 0 hPsi_site_21977 iPseU_CNN:0;iRNA_PseU:0 21978 chrX 106882674 106882674 1 + G A UCEC 106882673 + 106882653 106882693 41 GGGTTACTGCAGTCATCCCATGCTTCCCTTATGCCCGGCAG GGGTTACTGCAGTCATCCCATACTTCCCTTATGCCCGGCAG < 41bp 0.568359683465008 0.894239267034047 0.24458998 0.2583992 prediction 0.651759167138078 Functional Gain - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106882673 chrX:106882674 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28254 0 0 1 0 1 Ribosome 0.438718592995121 0.438718592994841 0 0 hPsi_site_21978 iPseU_CNN:0;iRNA_PseU:0 21979 chr1 160104956 160104956 1 + G A STAD 160104955 + 160104935 160104975 41 AGAAGCCAAGGCATGCGTGGTGCACGGCTCTGACCTGAAGG AGAAGCCAAGGCATGCGTGGTACACGGCTCTGACCTGAAGG < 41bp 0.400576993514396 0.825876846071367 0.30458874 0.71209073 prediction 0.651753692142733 Functional Gain - ATP1A2 ENSG00000018625 CDS Human protein_coding chr1:160104955 chr1:160104956 synonymous SNV . 0 22 hPsi_associated_SNPs_28255 0 0 0 0 1 exosome 0.438716794190275 0.438711972626972 0.42418146 0 hPsi_site_21979 iPseU_CNN:0.42418146;iRNA_PseU:0 21980 chr9 97321399 97321399 1 + C T SKCM 97321400 - 97321380 97321420 41 CCACAGCTCCGGCTCCTGTATGAATGCAATCCCGTGGCCTA CCACAGCTCCGGCTCCTGTATAAATGCAATCCCGTGGCCTA < 41bp 0.573657954516156 0.89953387213506 0.27881196 0.6048422 prediction 0.651751835237808 Functional Gain - FBP2 ENSG00000130957 CDS Human protein_coding chr9:97321400 chr9:97321399 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_28256 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0.2096844 0 hPsi_site_21980 iPseU_CNN:0.2096844;iRNA_PseU:0 21981 chr5 161116062 161116062 1 + C A UCEC 161116061 + 161116041 161116081 41 TAATTTGATGGTCAGTAAAATCTGGACGCCTGACACCTTTT TAATTTGATGGTCAGTAAAATATGGACGCCTGACACCTTTT < 41bp 0.467244142471377 0.825873958512328 0.2869544 0.32628772 prediction 0.651747917024656 Functional Gain - GABRA6 ENSG00000145863 CDS Human protein_coding chr5:161116061 chr5:161116062 synonymous SNV . 0 22 hPsi_associated_SNPs_28257 0 0 0 0 0 unknown 0.438527554356409 0.438758346461724 0 0 hPsi_site_21981 iPseU_CNN:0;iRNA_PseU:0 21982 chrX 72674274 72674274 1 + C A UCEC 72674273 + 72674253 72674293 41 AAAGATGATCAAAAAGAAAATCTCCCAGTTTGAGAATAGTG AAAGATGATCAAAAAGAAAATATCCCAGTTTGAGAATAGTG < 41bp 0.476663635956918 0.825873066505827 0.28647327 0.36988175 prediction 0.651746133011655 Functional Gain - CDX4 ENSG00000131264 CDS Human protein_coding chrX:72674273 chrX:72674274 synonymous SNV . 0 22 hPsi_associated_SNPs_28258 0 0 0 0 1 exosome 0.438718482522722 0.438711479479593 0 0 hPsi_site_21982 iPseU_CNN:0;iRNA_PseU:0 21983 chr11 43380551 43380551 1 + G A KIRP 43380550 + 43380530 43380570 41 GCCGGTACGAGCTGCCGCCTTGCTCCGGCCCAGGCTGGCTC GCCGGTACGAGCTGCCGCCTTACTCCGGCCCAGGCTGGCTC < 41bp 0.431493283701443 0.825872081030492 0.33534873 0.88185716 prediction 0.651744162060984 Functional Gain - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43380550 chr11:43380551 nonsynonymous SNV 0.975 0 22 hPsi_associated_SNPs_28259 0 0 1 0 0 Nucleus 0.438713797188298 0.438998347617865 0.76371432 0 hPsi_site_21983 iPseU_CNN:0.76371432;iRNA_PseU:0 21984 chr17 3100899 3100899 1 + G A SKCM 3100898 + 3100878 3100918 41 ACAGAATAATGTCTTCTTTGTGATTTTTTTGTGCATTTACC ACAGAATAATGTCTTCTTTGTAATTTTTTTGTGCATTTACC < 41bp 0.458857938711639 0.825870893803416 0.33118647 0.57874334 prediction 0.651741787606831 Functional Gain - OR1A2 ENSG00000172150 CDS Human protein_coding chr17:3100898 chr17:3100899 synonymous SNV . 0 22 hPsi_associated_SNPs_28260 0 0 0 0 0 exosome 0.438724726776162 0.449250366765022 0.15748668 0 hPsi_site_21984 iPseU_CNN:0.15748668;iRNA_PseU:0 21985 chr7 141414074 141414074 1 + G A BLCA 141414073 + 141414053 141414093 41 TTCCAGAGGCCCTAAGCATTTGAAGCTCACACCTGCTCCCC TTCCAGAGGCCCTAAGCATTTAAAGCTCACACCTGCTCCCC < 41bp 0.402171940192941 0.825869710434123 0.4715041 0.83875173 prediction 0.651739420868247 Functional Gain - WEE2 ENSG00000214102 CDS Human protein_coding chr7:141414073 chr7:141414074 synonymous SNV . 0 22 hPsi_associated_SNPs_28261 0 0 0 0 1 exosome 0.438718608125264 0.438718592937939 0.67750346 0 hPsi_site_21985 iPseU_CNN:0.67750346;iRNA_PseU:0 21986 chr11 128680769 128680769 1 + C A UCEC 128680768 + 128680748 128680788 41 GCCTGTCACTTCCTCCAGCTTCTTTGGAGCCGCATCACAAT GCCTGTCACTTCCTCCAGCTTATTTGGAGCCGCATCACAAT < 41bp 0.458036380851763 0.825869024779699 0.4809975 0.6412928 prediction 0.651738049559398 Functional Gain - FLI1 ENSG00000151702 CDS Human protein_coding chr11:128680768 chr11:128680769 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_28262 0 0 0 0 0 Endoplasmic reticulum 0.438718643044097 0.438719621108989 0.2825856 0 hPsi_site_21986 iPseU_CNN:0.2825856;iRNA_PseU:0 21987 chr3 98251382 98251382 1 + C A UCEC 98251381 + 98251361 98251401 41 TGCCTGCTGGGGTTGCCTACTCTTCTGTCCAGGGAGCTCAC TGCCTGCTGGGGTTGCCTACTATTCTGTCCAGGGAGCTCAC < 41bp 0.527388227072775 0.853253541447836 0.3561958 0.6453781 prediction 0.651730628750123 Functional Gain - GPR15 ENSG00000154165 CDS Human protein_coding chr3:98251381 chr3:98251382 nonsynonymous SNV 0.050 2 22 hPsi_associated_SNPs_28263 0 0 0 0 0 exosome 0.438747818421969 0.438749971472904 0.2907562 0 hPsi_site_21987 iPseU_CNN:0.2907562;iRNA_PseU:0 21988 chr6 167549850 167549850 1 + C A UCEC 167549849 + 167549829 167549869 41 CTTGCAGGAGGTCAGGCAGTTCTCCAGGCTATTTGTACCGA CTTGCAGGAGGTCAGGCAGTTATCCAGGCTATTTGTACCGA < 41bp 0.526150943328329 0.852012160097144 0.33984357 0.6450081 prediction 0.65172243353763 Functional Gain - CCR6 ENSG00000112486 CDS Human protein_coding chr6:167549849 chr6:167549850 nonsynonymous SNV 0.019 1 22 hPsi_associated_SNPs_28264 0 0 0 0 0 exosome 0.438681120506703 0.438718595483901 0.2900162 0 hPsi_site_21988 iPseU_CNN:0.2900162;iRNA_PseU:0 21989 chr17 72301443 72301443 1 + G A UCEC 72301442 + 72301422 72301462 41 CGTCAGCTGAAAAGATTGTGTGCACCTTCCCGGGCCATCAT CGTCAGCTGAAAAGATTGTGTACACCTTCCCGGGCCATCAT < 41bp 0.580842387363501 0.906702267926085 0.44072828 0.72261226 prediction 0.651719761125167 Functional Gain - DNAI2 ENSG00000171595 CDS Human protein_coding chr17:72301442 chr17:72301443 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_28265 0 0 0 2 1 exosome 0.438718576520956 0.438718439062706 0.44522452 0 hPsi_site_21989 iPseU_CNN:0.44522452;iRNA_PseU:0 21990 chr6 36988388 36988388 1 + G A UCEC 36988387 + 36988367 36988407 41 GAAGCAGCGCACCCTGGAGCTGCAAGCCCGGTAAAGGAGCT GAAGCAGCGCACCCTGGAGCTACAAGCCCGGTAAAGGAGCT < 41bp 0.576737198608823 0.902595391136913 0.4312027 0.84014904 prediction 0.65171638505618 Functional Gain - FGD2 ENSG00000146192 CDS Human protein_coding chr6:36988387 chr6:36988388 synonymous SNV . 0 22 hPsi_associated_SNPs_28266 0 0 0 0 2 Endoplasmic reticulum 0.438718586819152 0.43871859131217 0.68029808 0 hPsi_site_21990 iPseU_CNN:0.68029808;iRNA_PseU:0 21991 chr7 143748085 143748085 1 + G A OV 143748084 + 143748064 143748104 41 TGACACCTGGCTCAACCAGGTGGTCATCTTTGCTGCTTCAG TGACACCTGGCTCAACCAGGTAGTCATCTTTGCTGCTTCAG < 41bp 0.561612926497169 0.887467881462791 0.3346511 0.8177142 prediction 0.651709909931244 Functional Gain - OR2A5 ENSG00000221836 CDS Human protein_coding chr7:143748084 chr7:143748085 synonymous SNV . 0 22 hPsi_associated_SNPs_28267 0 0 0 0 0 unknown 0.43871890077548 0.43871155506122 0.6354284 0 hPsi_site_21991 iPseU_CNN:0.6354284;iRNA_PseU:0 21992 chr19 49967938 49967938 1 + G T THYM 49967937 + 49967917 49967957 41 GGACCCCTGCCCGGCTGTCCTGCCTCTCCAAGAACCTGAAC GGACCCCTGCCCGGCTGTCCTTCCTCTCCAAGAACCTGAAC < 41bp 0.508245466124569 0.834095082906539 0.33623233 0.52541757 prediction 0.65169923356394 Functional Gain - ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967937 chr19:49967938 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28268 0 0 0 0 2 Ribosome 0.438718242646326 0.438718755449926 0.05083514 0 hPsi_site_21992 iPseU_CNN:0.05083514;iRNA_PseU:0 21993 chrX 152815031 152815031 1 + C A LUAD 152815030 + 152815010 152815050 41 GCAACGCCACAGCCATCTGCTCCGACAAGACGGGCACGCTC GCAACGCCACAGCCATCTGCTACGACAAGACGGGCACGCTC < 41bp 0.441102631418631 0.825845034456225 0.33363688 0.7516061 prediction 0.65169006891245 Functional Gain - ATP2B3 ENSG00000067842 CDS Human protein_coding chrX:152815030 chrX:152815031 nonsynonymous SNV 0.817 5 22 hPsi_associated_SNPs_28269 0 0 0 0 1 exosome 0.438613411802036 0.438718242241373 0.5032122 0 hPsi_site_21993 iPseU_CNN:0.5032122;iRNA_PseU:0 21994 chr16 67470808 67470808 1 + C A MESO 67470807 + 67470787 67470827 41 TTCATCAGTCACTGTCTGCCTCGAGCACTGCAGCCTGGCCA TTCATCAGTCACTGTCTGCCTAGAGCACTGCAGCCTGGCCA < 41bp 0.52564483101005 0.851488914073599 0.2522169 0.3164996 prediction 0.651688166127097 Functional Gain - HSD11B2 ENSG00000176387 CDS Human protein_coding chr16:67470807 chr16:67470808 synonymous SNV . 0 22 hPsi_associated_SNPs_28270 0 0 1 0 0 Endoplasmic reticulum 0.438772648358398 0.438716904800784 0 0 hPsi_site_21994 iPseU_CNN:0;iRNA_PseU:0 21995 chr1 248685458 248685458 1 + C A LUSC 248685457 + 248685437 248685477 41 GTGCAGCTGCCCCTCTGTGGTCATCGCACACTGGATCATAT GTGCAGCTGCCCCTCTGTGGTAATCGCACACTGGATCATAT < 41bp 0.520892104712534 0.846728917661362 0.21625274 0.63210857 prediction 0.651673625897655 Functional Gain - OR2G6 ENSG00000188558 CDS Human protein_coding chr1:248685457 chr1:248685458 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_28271 0 0 0 0 0 unknown 0.443054399074697 0.439188960593366 0.26421714 0 hPsi_site_21995 iPseU_CNN:0.26421714;iRNA_PseU:0 21996 chr6 29364779 29364779 1 + C A UCEC 29364778 + 29364758 29364798 41 ATGCATAAGCCAGCTTCATTTCTTCCACTCCCTGGGCAGCA ATGCATAAGCCAGCTTCATTTATTCCACTCCCTGGGCAGCA < 41bp 0.529104534937437 0.85493626867856 0.34726185 0.36970592 prediction 0.651663467482247 Functional Gain - OR12D2 ENSG00000168787 CDS Human other chr6:29364778 chr6:29364779 nonsynonymous SNV 0.100 2 22 hPsi_associated_SNPs_28272 0 0 0 0 0 unknown 0.438718611004036 0.438720541431517 0 0 hPsi_site_21996 iPseU_CNN:0;iRNA_PseU:0 21997 chr2 131128796 131128796 1 + G A CESC 131128795 + 131128775 131128815 41 TGTGCCCCACTCTACGACGATGCCCTCTTCCTCCGGACTCC TGTGCCCCACTCTACGACGATACCCTCTTCCTCCGGACTCC < 41bp 0.577825316438996 0.903652693430537 0.3219725 0.80732876 prediction 0.651654753983081 Functional Gain - PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131128795 chr2:131128796 nonsynonymous SNV 0.050 2 22 hPsi_associated_SNPs_28273 0 0 1 0 2 Cytosol 0.4387118142377 0.438728713691899 0.61465752 0 hPsi_site_21997 iPseU_CNN:0.61465752;iRNA_PseU:0 21998 chr17 21205570 21205570 1 + C A UCEC 21205569 + 21205549 21205589 41 TCCTTGGGGAGATTGCTGTGTCTGTGAGTGGCCTGGGTGGG TCCTTGGGGAGATTGCTGTGTATGTGAGTGGCCTGGGTGGG < 41bp 0.448812253685198 0.825823522210564 0.2265645 0.5127035 prediction 0.651647044421127 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21205569 chr17:21205570 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28274 0 0 1 0 1 Ribosome 0.436110758687106 0.438666725551066 0.025407 0 hPsi_site_21998 iPseU_CNN:0.025407;iRNA_PseU:0 21999 chr5 137733955 137733955 1 + C A UCEC 137733954 + 137733934 137733974 41 GATGCCATGAACCTGTGGATTCCCTCTTCCTCCCTAGCAGA GATGCCATGAACCTGTGGATTACCTCTTCCTCCCTAGCAGA < 41bp 0.546328546980062 0.872151955542717 0.22076085 0.69524395 prediction 0.651646817125311 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137733954 chr5:137733955 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28275 0 0 1 0 1 Nucleus 0.438700567147437 0.438718777235917 0.3904879 0 hPsi_site_21999 iPseU_CNN:0.3904879;iRNA_PseU:0 22000 chr7 150093617 150093617 1 + G A rs565550571 150093616 + 150093596 150093636 41 GGCAGGAGCTGGGCTGGTGATGAAGGTCAAGCAGGAGAAGC GGCAGGAGCTGGGCTGGTGATAAAGGTCAAGCAGGAGAAGC < 41bp 0.559456541442738 0.885279486333761 0.19171387 0.4915456 prediction 0.651645889782045 Functional Gain - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150093616 chr7:150093617 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_28276 0 0 1 0 1 Cytosol 0.438663905144511 0.438727162605156 0 0 hPsi_site_22000 iPseU_CNN:0;iRNA_PseU:0 22001 chr2 27121541 27121541 1 + G A BLCA 27121540 + 27121520 27121560 41 TGATGCCACAGGAAAACTGGTGATCCCTGGTGGCATCGACA TGATGCCACAGGAAAACTGGTAATCCCTGGTGGCATCGACA < 41bp 0.405467400777243 0.825817102924706 0.20928189 0.7197716 prediction 0.651634205849413 Functional Gain - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27121540 chr2:27121541 synonymous SNV . 0 22 hPsi_associated_SNPs_28277 0 0 1 0 1 Ribosome 0.437769491979281 0.438718593118893 0.4395432 0 hPsi_site_22001 iPseU_CNN:0.4395432;iRNA_PseU:0 22002 chr1 64644139 64644139 1 + C A UCEC 64644138 + 64644118 64644158 41 ACAGGGCCAGATTGCTGGTTTCATTGGCCCGCCAATACCTC ACAGGGCCAGATTGCTGGTTTAATTGGCCCGCCAATACCTC < 41bp 0.519235882791306 0.845048821188997 0.45646605 0.6675923 prediction 0.651625876795383 Functional Gain - ROR1 ENSG00000185483 CDS Human protein_coding chr1:64644138 chr1:64644139 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28278 0 0 1 0 0 Nucleus 0.438718592995102 0.438718592995102 0.3351846 0 hPsi_site_22002 iPseU_CNN:0.3351846;iRNA_PseU:0 22003 chr1 152648586 152648586 1 + G A COAD 152648585 + 152648565 152648605 41 CACCTAAGTGTCCCCCCAAATGCCCACCACAGTGCCCAGCT CACCTAAGTGTCCCCCCAAATACCCACCACAGTGCCCAGCT < 41bp 0.431534582018181 0.82581089574352 0.29159367 0.6027818 prediction 0.651621791487039 Functional Gain - LCE2C ENSG00000187180 CDS Human protein_coding chr1:152648585 chr1:152648586 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_28279 0 0 0 0 0 exosome 0.438718592952002 0.438718592653701 0.2055636 0 hPsi_site_22003 iPseU_CNN:0.2055636;iRNA_PseU:0 22004 chr17 48632978 48632978 1 + G A STAD 48632977 + 48632957 48632997 41 TGAGAATCAAGCCTGCTCAGTGCCCATCACTGATCCCTGCG TGAGAATCAAGCCTGCTCAGTACCCATCACTGATCCCTGCG < 41bp 0.57167942765037 0.897488544386153 0.1503062 0.71400374 prediction 0.651618233471567 Functional Gain - SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48632977 chr17:48632978 synonymous SNV . 0 22 hPsi_associated_SNPs_28280 0 0 1 1 0 nucleus 0.438718591089463 0.438718340491445 0.42800748 0 hPsi_site_22004 iPseU_CNN:0.42800748;iRNA_PseU:0 22005 chr7 6150896 6150896 1 + G A COAD 6150895 + 6150875 6150915 41 CTGGGGTGCTGTGTCTTCATTGAATGATGTGTCAAATCACA CTGGGGTGCTGTGTCTTCATTAAATGATGTGTCAAATCACA < 41bp 0.421283884038374 0.82580641853576 0.23150441 0.29110032 prediction 0.651612837071519 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6150895 chr7:6150896 synonymous SNV . 0 22 hPsi_associated_SNPs_28281 0 0 1 0 0 Ribosome 0.438780721557465 0.438725892490727 0 0 hPsi_site_22005 iPseU_CNN:0;iRNA_PseU:0 22006 chr19 49843759 49843759 1 + G A rs80061951 49843758 + 49843738 49843778 41 GTCACCTCTCCCACGGGACCTGGGGCTTTCGTCCACAGCTT GTCACCTCTCCCACGGGACCTAGGGCTTTCGTCCACAGCTT < 41bp 0.423309187795031 0.825791724421853 0.15760562 0.19965717 prediction 0.651583448843705 Functional Gain - CD37 ENSG00000197813 ncRNA_exonic Human lincRNA chr19:49843758 chr19:49843759 . . 0 22 hPsi_associated_SNPs_28282 0 0 1 0 0 Endoplasmic reticulum 0.438718673706797 0.438718592636256 0 0 hPsi_site_22006 iPseU_CNN:0;iRNA_PseU:0 22007 chr6 26452217 26452217 1 + C A LUSC 26452216 + 26452196 26452236 41 GATGGGAATAAGTATCGGGCTCTCACTGAGCCCAGAACCAA GATGGGAATAAGTATCGGGCTATCACTGAGCCCAGAACCAA < 41bp 0.524271335078229 0.850061767167896 0.4797127 0.7217791 prediction 0.651580864179334 Functional Gain - BTN3A3 ENSG00000111801 CDS Human protein_coding chr6:26452216 chr6:26452217 nonsynonymous SNV 0.005 2 22 hPsi_associated_SNPs_28283 0 0 0 0 0 Endoplasmic reticulum 0.438718590350776 0.438718592995091 0.4435582 0 hPsi_site_22007 iPseU_CNN:0.4435582;iRNA_PseU:0 22008 chr18 21735985 21735985 1 + C A CESC 21735984 + 21735964 21736004 41 TACGTCCCAGCTGACCCAGCTCAGCTTGCTGCTCAGATGTT TACGTCCCAGCTGACCCAGCTAAGCTTGCTGCTCAGATGTT < 41bp 0.544519658600595 0.870308030494937 0.3429442 0.5963304 prediction 0.651576743788684 Functional Gain - CABYR ENSG00000154040 CDS Human protein_coding chr18:21735984 chr18:21735985 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28284 0 0 0 6 1 Nucleus 0.438703172894988 0.438718251812583 0.1926608 0 hPsi_site_22008 iPseU_CNN:0.1926608;iRNA_PseU:0 22009 chr17 7344826 7344826 1 + G A SKCM 7344825 + 7344805 7344845 41 GCATCGTCACCAAACTGTTCTGCCGCCAGGGTTTCTACCTC GCATCGTCACCAAACTGTTCTACCGCCAGGGTTTCTACCTC < 41bp 0.583618632237255 0.909404416754614 0.34620082 0.6647208 prediction 0.651571569034717 Functional Gain - FGF11 ENSG00000161958 CDS Human protein_coding chr17:7344825 chr17:7344826 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28285 0 0 1 9 3 exosome 0.438718361160724 0.438712687902455 0.3294416 0 hPsi_site_22009 iPseU_CNN:0.3294416;iRNA_PseU:0 22010 chr14 62245620 62245620 1 + G A UCEC 62245619 + 62245599 62245639 41 AAATCAAAGGCCTTTTCAGTTGTCATACAGGTAAGTTATTC AAATCAAAGGCCTTTTCAGTTATCATACAGGTAAGTTATTC < 41bp 0.555817455627666 0.881601732399562 0.2290532 0.29470026 prediction 0.651568553543792 Functional Gain - SNAPC1 ENSG00000023608 CDS Human protein_coding chr14:62245619 chr14:62245620 nonsynonymous SNV 0.854 4 22 hPsi_associated_SNPs_28286 0 0 0 0 2 chromatin 0.438718593687142 0.438718592892038 0 0 hPsi_site_22010 iPseU_CNN:0;iRNA_PseU:0 22011 chr11 4661787 4661787 1 + C A LUAD 4661786 + 4661766 4661806 41 AGGCTTTCAACACCTGCATCTCCCACCTCTGTGCTGTTCTG AGGCTTTCAACACCTGCATCTACCACCTCTGTGCTGTTCTG < 41bp 0.483517403230157 0.825783625479548 0.19222072 0.42222163 prediction 0.651567250959096 Functional Gain - OR51D1 ENSG00000197428 CDS Human protein_coding chr11:4661786 chr11:4661787 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28287 0 0 0 0 0 unknown 0.438716422135286 0.438302784136386 0 0 hPsi_site_22011 iPseU_CNN:0;iRNA_PseU:0 22012 chr19 15852405 15852405 1 + C A rs574977979 15852404 + 15852384 15852424 41 ACCTCTTCTTGTGTGCCCTCTCCATCTCTGAGATTCTGTTC ACCTCTTCTTGTGTGCCCTCTACATCTCTGAGATTCTGTTC < 41bp 0.485362622208846 0.825780873112119 0.2654048 0.3103102 prediction 0.651561746224239 Functional Gain - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852404 chr19:15852405 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_28288 0 0 0 0 0 unknown 0.43872012123616 0.438168096589586 0 0 hPsi_site_22012 iPseU_CNN:0;iRNA_PseU:0 22013 chr12 42768706 42768706 1 + C A SKCM 42768705 + 42768685 42768725 41 GAAGAAAAAGTTTCTACTCTTCCCATTATGCGAGAGAGCGG GAAGAAAAAGTTTCTACTCTTACCATTATGCGAGAGAGCGG < 41bp 0.491023347790371 0.825780844277738 0.3004663 0.4943628 prediction 0.651561688555475 Functional Gain - PPHLN1 ENSG00000134283 CDS Human protein_coding chr12:42768705 chr12:42768706 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_28289 0 0 1 0 1 Ribosome 0.438718815090067 0.438719309598498 0 0 hPsi_site_22013 iPseU_CNN:0;iRNA_PseU:0 22014 chr6 74072909 74072909 1 + C A COAD 74072908 + 74072888 74072928 41 CCCTAACGGCGAGGCTGAGATCTTGGTATTTGGGAGGCCTT CCCTAACGGCGAGGCTGAGATATTGGTATTTGGGAGGCCTT < 41bp 0.540166368549104 0.865945349031277 0.2688335 0.33670083 prediction 0.651557960964346 Functional Gain - KHDC3L ENSG00000203908 CDS Human protein_coding chr6:74072908 chr6:74072909 synonymous SNV . 0 22 hPsi_associated_SNPs_28290 0 0 0 0 2 unknown 0.438718638782858 0.438718637544709 0 0 hPsi_site_22014 iPseU_CNN:0;iRNA_PseU:0 22015 chr9 136245912 136245912 1 + G A rs56360106 136245911 + 136245891 136245931 41 TCTTCCTTGCTGATAGGTTTTGTACCAGCTGAATCCTGGGG TCTTCCTTGCTGATAGGTTTTATACCAGCTGAATCCTGGGG < 41bp 0.417203753310463 0.825774341471215 0.34562987 0.73039854 prediction 0.651548682942429 Functional Gain - STKLD1 ENSG00000198870 CDS Human protein_coding chr9:136245911 chr9:136245912 synonymous SNV . 0 22 hPsi_associated_SNPs_28291 0 0 0 0 2 nucleolus 0.438668726315116 0.438718489486525 0.46079708 0 hPsi_site_22015 iPseU_CNN:0.46079708;iRNA_PseU:0 Body mass index 22016 chr3 48310098 48310098 1 + G A UCEC 48310097 + 48310077 48310117 41 CCGGGGAGAAACCTTATGTGTGCAGCCATTGTGGGCGAGGC CCGGGGAGAAACCTTATGTGTACAGCCATTGTGGGCGAGGC < 41bp 0.571013124301727 0.896786513453934 0.25247818 0.4950036 prediction 0.651546778304412 Functional Gain - ZNF589 ENSG00000164048 CDS Human protein_coding chr3:48310097 chr3:48310098 nonsynonymous SNV 0.174 4 22 hPsi_associated_SNPs_28292 0 0 1 0 0 Cytosol 0.438718592995063 0.43871859268304 0 0 hPsi_site_22016 iPseU_CNN:0;iRNA_PseU:0 22017 chr2 54001465 54001465 1 + G A TGCT 54001464 + 54001444 54001484 41 TGTGATAATCCTGATTATCTTGGTCCTGCACCTCTGGAAGA TGTGATAATCCTGATTATCTTAGTCCTGCACCTCTGGAAGA < 41bp 0.473415733430038 0.825773252955906 0.19544318 0.38857952 prediction 0.651546505911812 Functional Gain - CHAC2 ENSG00000143942 CDS Human protein_coding chr2:54001464 chr2:54001465 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28293 0 0 1 0 0 Ribosome 0.438730307928962 0.438720602135822 0 0 hPsi_site_22017 iPseU_CNN:0;iRNA_PseU:0 22018 chr1 41285863 41285863 1 + G A rs137896524 41285862 + 41285842 41285882 41 CCTAGGCTCCGGCTTTGCCCTGAAGGTCCAGGAGCAGCACC CCTAGGCTCCGGCTTTGCCCTAAAGGTCCAGGAGCAGCACC < 41bp 0.415560871023882 0.825766663664446 0.26319593 0.35602558 prediction 0.651533327328892 Functional Gain - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41285862 chr1:41285863 synonymous SNV . 0 22 hPsi_associated_SNPs_28294 1 0 0 0 2 chromatin 0.438718592992645 0.438718592995257 0 0 hPsi_site_22018 iPseU_CNN:0;iRNA_PseU:0 22019 chr4 120382953 120382953 1 + G A rs201401825 120382952 + 120382932 120382972 41 GCGAGTGAACAGATGTCAGATGCCTGGTAACAGGGTGCAGT GCGAGTGAACAGATGTCAGATACCTGGTAACAGGGTGCAGT < 41bp 0.434383629220271 0.825765399947098 0.23845997 0.6898785 prediction 0.651530799894196 Functional Gain - LOC645513 ENSG00000245958 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:120382952 chr4:120382953 . . 0 22 hPsi_associated_SNPs_28295 0 0 0 0 2 unknown 0.451575878150936 0.437744202639176 0.379757 0 hPsi_site_22019 iPseU_CNN:0.379757;iRNA_PseU:0 22020 chr14 29237645 29237645 1 + C A LUAD 29237644 + 29237624 29237664 41 CGGCCGCCGCGCTAGCCGCCTCGGTGCCCTGCGGCCTGTCG CGGCCGCCGCGCTAGCCGCCTAGGTGCCCTGCGGCCTGTCG < 41bp 0.468733572810064 0.82575932390688 0.3125822 0.27531165 prediction 0.651518647813761 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237644 chr14:29237645 stopgain 0.997 0 22 hPsi_associated_SNPs_28296 0 0 1 0 0 Cytosol 0.438727564088061 0.438755548384243 0 0 hPsi_site_22020 iPseU_CNN:0;iRNA_PseU:0 22021 chrX 99917318 99917318 1 + G A UCEC 99917317 + 99917297 99917337 41 ATTGATTGGAAGGAGGTCGGTGCAATGCCTGCCAAGCCGTC ATTGATTGGAAGGAGGTCGGTACAATGCCTGCCAAGCCGTC < 41bp 0.580002064824874 0.905756137354456 0.7913216 0.93949676 prediction 0.651508145059165 Functional Gain - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99917317 chrX:99917318 synonymous SNV . 0 22 hPsi_associated_SNPs_28297 0 0 1 0 1 nucleus 0.438718852803304 0.438718045615341 0.29635032 0 hPsi_site_22021 iPseU_CNN:0.29635032;iRNA_PseU:0 22022 chr2 233321701 233321701 1 + G T GBM 233321700 + 233321680 233321720 41 CAACTTCCAGACCATCGGCTTGAGTGCAGCCGCCCGCTTTA CAACTTCCAGACCATCGGCTTTAGTGCAGCCGCCCGCTTTA < 41bp 0.502568770408245 0.828322621423999 0.62309235 0.9316344 prediction 0.651507702031507 Functional Gain - ALPI ENSG00000163295 CDS Human protein_coding chr2:233321700 chr2:233321701 nonsynonymous SNV 0.105 4 22 hPsi_associated_SNPs_28298 0 0 0 0 2 Cytosol 0.43861431489007 0.438718097104051 0.6170841 0 hPsi_site_22022 iPseU_CNN:0.6170841;iRNA_PseU:0 22023 chr22 44342537 44342537 1 + C A rs537338257 44342536 + 44342516 44342556 41 AGGGTCCCTTACTGACTGTTTCGTGGCCCTATTAATGGTCA AGGGTCCCTTACTGACTGTTTAGTGGCCCTATTAATGGTCA < 41bp 0.481945264110698 0.825751981414493 0.26158908 0.44659945 prediction 0.651503962828986 Functional Gain - PNPLA3 ENSG00000100344 UTR3 Human protein_coding chr22:44342536 chr22:44342537 . . 0 22 hPsi_associated_SNPs_28299 0 0 1 0 0 cytosol 0.438719837428903 0.438718652620595 0 0 hPsi_site_22023 iPseU_CNN:0;iRNA_PseU:0 22024 chr5 7889319 7889319 1 + G A CESC 7889318 + 7889298 7889338 41 TATAGCCGCTTTGTACGAGATGCCTGTGCCTGCTTGTTGGA TATAGCCGCTTTGTACGAGATACCTGTGCCTGCTTGTTGGA < 41bp 0.575691356567865 0.901439513421604 0.21796584 0.68067616 prediction 0.651496313707478 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7889318 chr5:7889319 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_28300 0 0 1 1 1 Nucleus 0.43860890803462 0.43868581988106 0.36135232 0 hPsi_site_22024 iPseU_CNN:0.36135232;iRNA_PseU:0 22025 chr14 24424358 24424358 1 + G A BLCA 24424357 + 24424337 24424377 41 CACGCTGCAGGGGGAGGGGCTGAGCGTGACGGGCACCGTGT CACGCTGCAGGGGGAGGGGCTAAGCGTGACGGGCACCGTGT < 41bp 0.40918511138315 0.825747962329876 0.25230107 0.45101482 prediction 0.651495924659752 Functional Gain - DHRS4 ENSG00000157326 CDS Human protein_coding chr14:24424357 chr14:24424358 synonymous SNV . 0 22 hPsi_associated_SNPs_28301 0 0 1 0 1 Ribosome 0.438718630425179 0.438718647772414 0 0 hPsi_site_22025 iPseU_CNN:0;iRNA_PseU:0 22026 chr8 2088717 2088717 1 + G T rs143646514 2088716 + 2088696 2088736 41 AGATGGCTTGGCTGCAGATATGTGAGCCGACTGAGAAGGAT AGATGGCTTGGCTGCAGATATTTGAGCCGACTGAGAAGGAT < 41bp 0.496235450598845 0.825745390766514 0.42790508 0.6136278 prediction 0.651490781533028 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2088716 chr8:2088717 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28302 0 0 0 0 2 exosome 0.432376052959928 0.43872945127017 0.2272556 0 hPsi_site_22026 iPseU_CNN:0.2272556;iRNA_PseU:0 22027 chr6 52268902 52268902 1 + G T LIHC 52268901 + 52268881 52268921 41 CATCTGTACGCTCTCCCAGCTGGAGGCCATCCTCCTGGACT CATCTGTACGCTCTCCCAGCTTGAGGCCATCCTCCTGGACT < 41bp 0.496261866330032 0.825744897824832 0.2967574 0.38850135 prediction 0.651489795649663 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268901 chr6:52268902 synonymous SNV . 0 22 hPsi_associated_SNPs_28303 0 0 1 0 0 Ribosome 0.438718626681183 0.438596655467088 0 0 hPsi_site_22027 iPseU_CNN:0;iRNA_PseU:0 22028 chr8 134237699 134237699 1 + G A BRCA 134237698 + 134237678 134237718 41 ACACAAGCCCCTGGAGCCCTTGCTCCACCAGCTGCGGCCTG ACACAAGCCCCTGGAGCCCTTACTCCACCAGCTGCGGCCTG < 41bp 0.403933148797921 0.825731773248453 0.274665 0.58827156 prediction 0.651463546496905 Functional Gain - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134237698 chr8:134237699 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_28304 0 0 0 0 1 nucleus 0.438718582360588 0.438718306438424 0.17654312 0 hPsi_site_22028 iPseU_CNN:0.17654312;iRNA_PseU:0 22029 chr13 115000390 115000390 1 + G A rs17337717 115000389 + 115000369 115000409 41 GGCAGTGCACGGGGCCTGGGTGGGGGGTGCGGGTGTGGGTG GGCAGTGCACGGGGCCTGGGTAGGGGGTGCGGGTGTGGGTG < 41bp 0.454011322577704 0.825730170813108 0.29309368 0.76205397 prediction 0.651460341626217 Functional Gain - CDC16 ENSG00000130177 UTR5 Human protein_coding chr13:115000389 chr13:115000390 . . 0 22 hPsi_associated_SNPs_28305 0 0 1 0 0 Ribosome 0.438709451084884 0.438728883088431 0.52410794 0 hPsi_site_22029 iPseU_CNN:0.52410794;iRNA_PseU:0 22030 chr17 7481978 7481978 1 + C A rs186194028 7481977 + 7481957 7481997 41 GAACATTTTAGACACCCTTTTCTTTGGGGTAGGCTCTTGCC GAACATTTTAGACACCCTTTTATTTGGGGTAGGCTCTTGCC < 41bp 0.475230326974882 0.825729353638053 0.38311845 0.5453316 prediction 0.651458707276105 Functional Gain - SENP3-EIF4A1 ENSG00000264772;ENSG00000265500 ncRNA_exonic Human other chr17:7481977 chr17:7481978 . . 0 22 hPsi_associated_SNPs_28306 0 0 1 1 0 exosome 0.438718592995102 0.438718592992504 0.0906632000000001 0 hPsi_site_22030 iPseU_CNN:0.0906632000000001;iRNA_PseU:0 22031 chr6 150267749 150267749 1 + C A READ 150267748 + 150267728 150267768 41 TATAGGATGGCTTGAGGACTTCTTGATGGGCATGGACAGCA TATAGGATGGCTTGAGGACTTATTGATGGGCATGGACAGCA < 41bp 0.466693498279548 0.825727273989291 0.28628835 0.31843817 prediction 0.651454547978582 Functional Gain - ULBP2 ENSG00000131015 CDS Human protein_coding chr6:150267748 chr6:150267749 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_28307 0 0 0 0 1 Endoplasmic reticulum 0.438718590430608 0.438852521524648 0 0 hPsi_site_22031 iPseU_CNN:0;iRNA_PseU:0 22032 chrX 37028042 37028042 1 + C A OV 37028041 + 37028021 37028061 41 AGCCTTCTGAGACTGGAGTGTCCCATCTCCGCCCAGAGCCT AGCCTTCTGAGACTGGAGTGTACCATCTCCGCCCAGAGCCT < 41bp 0.469905551941464 0.825722715181678 0.2921328 0.56201386 prediction 0.651445430363357 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37028041 chrX:37028042 nonsynonymous SNV 0.006 2 22 hPsi_associated_SNPs_28308 0 0 0 0 0 unknown 0.4387185848846 0.438718593640669 0.12402772 0 hPsi_site_22032 iPseU_CNN:0.12402772;iRNA_PseU:0 22033 chr2 208615703 208615703 1 + C A GBM 208615702 + 208615682 208615722 41 AATGAAATGGAAAGGCATTTTCTGGAGCTTCTTCAGTTTAA AATGAAATGGAAAGGCATTTTATGGAGCTTCTTCAGTTTAA < 41bp 0.467517707070427 0.825720399231992 0.2413182 0.30235803 prediction 0.651440798463983 Functional Gain - CCNYL1 ENSG00000163249 CDS Human protein_coding chr2:208615702 chr2:208615703 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_28309 0 0 1 0 1 Cytosol 0.438722614356599 0.438711035512567 0 0 hPsi_site_22033 iPseU_CNN:0;iRNA_PseU:0 22034 chr18 3277813 3277813 1 + C A ACC 3277812 + 3277792 3277832 41 CTGCTGACAACCATGGGGGATCGGTTTACAGATGAGGAAGT CTGCTGACAACCATGGGGGATAGGTTTACAGATGAGGAAGT < 41bp 0.525669057491911 0.85138670547543 0.1722391 0.2937444 prediction 0.651435295967038 Functional Gain - MYL12B ENSG00000118680 CDS Human protein_coding chr18:3277812 chr18:3277813 synonymous SNV . 0 22 hPsi_associated_SNPs_28310 0 0 1 0 1 Cytosol 0.438712535557093 0.438718589631276 0 0 hPsi_site_22034 iPseU_CNN:0;iRNA_PseU:0 22035 chr1 150235799 150235799 1 + C A UCEC 150235798 + 150235778 150235818 41 GCCTCTCAATCAGCGCATGGTCTTTGCTTCTTTCATCCAAG GCCTCTCAATCAGCGCATGGTATTTGCTTCTTTCATCCAAG < 41bp 0.462615558116188 0.825712858035277 0.2883861 0.5298478 prediction 0.651425716070554 Functional Gain - CA14 ENSG00000118298 CDS Human protein_coding chr1:150235798 chr1:150235799 synonymous SNV . 0 22 hPsi_associated_SNPs_28311 0 0 0 0 1 exosome 0.438797881026071 0.439201928641205 0.0596956 0 hPsi_site_22035 iPseU_CNN:0.0596956;iRNA_PseU:0 22036 chr19 19359616 19359616 1 + G A UCEC 19359615 + 19359595 19359635 41 TACCAGTGCAATGAAGGATTTGCCCAGCACCATGTGGCCAC TACCAGTGCAATGAAGGATTTACCCAGCACCATGTGGCCAC < 41bp 0.400870178848106 0.825710031641902 0.24235854 0.6681485 prediction 0.651420063283804 Functional Gain - NCAN ENSG00000130287 CDS Human protein_coding chr19:19359615 chr19:19359616 nonsynonymous SNV 0.926 0 22 hPsi_associated_SNPs_28312 0 0 0 0 1 exosome 0.438718621524618 0.438718526784184 0.336297 0 hPsi_site_22036 iPseU_CNN:0.336297;iRNA_PseU:0 22037 chr9 79118417 79118417 1 + G A LUSC 79118416 + 79118396 79118436 41 GCTCCCTACCCGCCCTGCGATGGAGTCCATGTGCGCTCAGT GCTCCCTACCCGCCCTGCGATAGAGTCCATGTGCGCTCAGT < 41bp 0.415377296106376 0.825707596486596 0.5727942 0.5768377 prediction 0.651415192973191 Functional Gain - GCNT1 ENSG00000187210 CDS Human protein_coding chr9:79118416 chr9:79118417 nonsynonymous SNV 0.004 4 22 hPsi_associated_SNPs_28313 0 0 1 0 0 exosome 0.438725037509128 0.438718333405285 0.00808699999999996 0 hPsi_site_22037 iPseU_CNN:0.00808699999999996;iRNA_PseU:0 22038 chr5 159851318 159851318 1 + C A COAD 159851317 + 159851297 159851337 41 CTATCCAGAAATAGAAAAATTCTTTCCCTTCAATCCTCTAG CTATCCAGAAATAGAAAAATTATTTCCCTTCAATCCTCTAG < 41bp 0.528909257331418 0.854616304841162 0.33268952 0.29453382 prediction 0.651414095019488 Functional Gain - PTTG1 ENSG00000164611 CDS Human protein_coding chr5:159851317 chr5:159851318 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_28314 0 0 1 0 2 Ribosome 0.438718595796398 0.438718593702813 0 0 hPsi_site_22038 iPseU_CNN:0;iRNA_PseU:0 22039 chr17 73492858 73492858 1 + G A UCEC 73492857 + 73492837 73492877 41 TAAGTGCTTCCTCTTCCTGCTGCAGTGCCAGCTGACTCTTG TAAGTGCTTCCTCTTCCTGCTACAGTGCCAGCTGACTCTTG < 41bp 0.401479510009818 0.825706566688199 0.33214772 0.57385457 prediction 0.651413133376397 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73492857 chr17:73492858 synonymous SNV . 0 22 hPsi_associated_SNPs_28315 0 0 1 0 2 Cytosol 0.438720226758736 0.438717498798177 0.14770914 0 hPsi_site_22039 iPseU_CNN:0.14770914;iRNA_PseU:0 22040 chrX 102192612 102192612 1 + C A UCEC 102192611 + 102192591 102192631 41 TGCCCCTGGTGTCCCTAAAATCCTGGTGGGGAATCGCCTAC TGCCCCTGGTGTCCCTAAAATACTGGTGGGGAATCGCCTAC < 41bp 0.528005697231428 0.853708628575823 0.18996736 0.36661482 prediction 0.65140586268879 Functional Gain - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192611 chrX:102192612 synonymous SNV . 0 22 hPsi_associated_SNPs_28316 0 0 0 0 0 exosome 0.438718592934235 0.438718466374051 0 0 hPsi_site_22040 iPseU_CNN:0;iRNA_PseU:0 22041 chr6 30593281 30593281 1 + C A UCEC 30593280 + 30593260 30593300 41 TTCTTTTTTAATCCCTTAGGTCTCCTCATTTACCACATCCC TTCTTTTTTAATCCCTTAGGTATCCTCATTTACCACATCCC < 41bp 0.492671472672466 0.825702467634663 0.26226574 0.34843266 prediction 0.651404935269326 Functional Gain - MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593280 chr6:30593281 nonsynonymous SNV 0.930 0 22 hPsi_associated_SNPs_28317 0 0 1 0 1 Cytosol 0.438718593950783 0.438718593822424 0 0 hPsi_site_22041 iPseU_CNN:0;iRNA_PseU:0 22042 chr11 60704083 60704083 1 + G A SKCM 60704082 + 60704062 60704102 41 GGGGAGGGGAGCTGCCCCTGTGAGAGTGGGGGAGGAGGGGA GGGGAGGGGAGCTGCCCCTGTAAGAGTGGGGGAGGAGGGGA < 41bp 0.559537005080358 0.885238205052918 0.27540278 0.68800986 prediction 0.65140239994512 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60704082 chr11:60704083 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_28318 0 0 1 0 0 Ribosome 0.438708613509445 0.438718333706588 0.37601972 0 hPsi_site_22042 iPseU_CNN:0.37601972;iRNA_PseU:0 22043 chr20 2729210 2729210 1 + C A UCEC 2729209 + 2729189 2729229 41 TTTCAGGTTCTTCCTCAAGTTCTTCCTCAAATGCAACCAGA TTTCAGGTTCTTCCTCAAGTTATTCCTCAAATGCAACCAGA < 41bp 0.534801740966769 0.860497215350386 0.36042556 0.65865445 prediction 0.651390948767235 Functional Gain - EBF4 ENSG00000088881 CDS Human protein_coding chr20:2729209 chr20:2729210 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_28319 0 0 0 0 2 exosome 0.439006853995337 0.438434147183642 0.3173089 0 hPsi_site_22043 iPseU_CNN:0.3173089;iRNA_PseU:0 22044 chr22 38211144 38211144 1 + G A UCEC 38211143 + 38211123 38211163 41 TTTCCTGCAGAAGCATCGGCTGCGCCTGGTGGCCACTGATG TTTCCTGCAGAAGCATCGGCTACGCCTGGTGGCCACTGATG < 41bp 0.406216038153563 0.825694025280125 0.19576815 0.3608572 prediction 0.651388050560251 Functional Gain - GCAT ENSG00000100116 CDS Human protein_coding chr22:38211143 chr22:38211144 synonymous SNV . 0 22 hPsi_associated_SNPs_28320 0 0 1 0 1 Cytosol 0.438733286863541 0.438772581410027 0 0 hPsi_site_22044 iPseU_CNN:0;iRNA_PseU:0 22045 chr7 142460310 142460310 1 + G A LIHC 142460309 + 142460289 142460329 41 CCCAGACGAGCTGCAGTGCCTGGATGCTCCTGTGCTGAGCC CCCAGACGAGCTGCAGTGCCTAGATGCTCCTGTGCTGAGCC < 41bp 0.430897517516348 0.825693808349406 0.29031464 0.36343935 prediction 0.651387616698812 Functional Gain - PRSS1 ENSG00000204983 CDS Human protein_coding chr7:142460309 chr7:142460310 synonymous SNV . 0 22 hPsi_associated_SNPs_28321 0 0 0 0 1 Cytosol 0.4387184921758 0.438718692991206 0 0 hPsi_site_22045 iPseU_CNN:0;iRNA_PseU:0 22046 chr7 100304864 100304864 1 + C A rs11559028 100304863 + 100304843 100304883 41 CCACATCCGAGTCTTCAGGGTCACACCCAAGTAATTGAAAA CCACATCCGAGTCTTCAGGGTAACACCCAAGTAATTGAAAA < 41bp 0.481364284233675 0.825680142382857 0.21370158 0.57951194 prediction 0.651360284765715 Functional Gain - POP7 ENSG00000172336 CDS Human protein_coding chr7:100304863 chr7:100304864 synonymous SNV . 0 22 hPsi_associated_SNPs_28322 0 0 1 0 0 Cytosol 0.43871859328492 0.438718592995095 0.15902388 0 hPsi_site_22046 iPseU_CNN:0.15902388;iRNA_PseU:0 22047 chr2 170936374 170936374 1 + G A UCEC 170936373 + 170936353 170936393 41 ATTACCACACCTACTACAGTTGCCTGAGAATTATAACACCA ATTACCACACCTACTACAGTTACCTGAGAATTATAACACCA < 41bp 0.43295541707931 0.825679721409474 0.17142963 0.23139629 prediction 0.651359442818948 Functional Gain - UBR3 ENSG00000144357 CDS Human protein_coding chr2:170936373 chr2:170936374 synonymous SNV . 0 22 hPsi_associated_SNPs_28323 0 0 1 0 1 Cytosol 0.438790353260046 0.438728571201216 0 0 hPsi_site_22047 iPseU_CNN:0;iRNA_PseU:0 22048 chr5 140481842 140481842 1 + G A SKCM 140481841 + 140481821 140481861 41 CGCGTGGGCGCCACAGACCGTGGCTCCCCGGCTTTGAGCAG CGCGTGGGCGCCACAGACCGTAGCTCCCCGGCTTTGAGCAG < 41bp 0.415678575745604 0.825679359830809 0.23408398 0.40420702 prediction 0.651358719661618 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481841 chr5:140481842 nonsynonymous SNV 0.005 3 22 hPsi_associated_SNPs_28324 0 0 1 0 0 exosome 0.438718654214668 0.43871490083609 0 0 hPsi_site_22048 iPseU_CNN:0;iRNA_PseU:0 22049 chr9 96441213 96441213 1 + G A rs150766012 96441212 + 96441192 96441232 41 TGAAAAACAAGTGATGTCTGTGCAGCCTTACACTCTGTCTT TGAAAAACAAGTGATGTCTGTACAGCCTTACACTCTGTCTT < 41bp 0.465924938832827 0.825677626247666 0.4516089 0.86956596 prediction 0.651355252495331 Functional Gain - PHF2 ENSG00000197724 UTR3 Human protein_coding chr9:96441212 chr9:96441213 . . 0 22 hPsi_associated_SNPs_28325 0 0 1 0 0 chromatin 0.438711609192569 0.438713579844483 0.73913192 0 hPsi_site_22049 iPseU_CNN:0.73913192;iRNA_PseU:0 22050 chr11 6129368 6129368 1 + C A UCEC 6129367 + 6129347 6129387 41 CTTCTGCATAGAGTCAGGCATCTTTCTCTGCATGGCAGTAG CTTCTGCATAGAGTCAGGCATATTTCTCTGCATGGCAGTAG < 41bp 0.514433646427438 0.840110519126109 0.37800565 0.6344582 prediction 0.651353745397343 Functional Gain - OR56B4 ENSG00000180919 CDS Human protein_coding chr11:6129367 chr11:6129368 synonymous SNV . 0 22 hPsi_associated_SNPs_28326 0 0 0 0 0 unknown 0.438841465226278 0.438722495108064 0.2689164 0 hPsi_site_22050 iPseU_CNN:0.2689164;iRNA_PseU:0 22051 chr13 52035085 52035085 1 + C A TGCT 52035084 + 52035064 52035104 41 GGAATCCCTCATCTGGTGACTCATGATGGTCGCACCATCCG GGAATCCCTCATCTGGTGACTAATGATGGTCGCACCATCCG < 41bp 0.505319466993571 0.83099334675351 0.13049436 0.27686977 prediction 0.651347759519878 Functional Gain - INTS6-AS1;MIR4703 ENSG00000224892 ncRNA_exonic Human transcribed_processed_pseudogene chr13:52035084 chr13:52035085 . . 0 22 hPsi_associated_SNPs_28327 0 0 0 0 0 unknown 0.438571066103745 0.438713144144576 0 0 hPsi_site_22051 iPseU_CNN:0;iRNA_PseU:0 22052 chr12 55420633 55420633 1 + G A LUAD 55420632 + 55420612 55420652 41 GACTGGCCAGGAACTATATTTGGGCTTTATCTGAAGTCCTG GACTGGCCAGGAACTATATTTAGGCTTTATCTGAAGTCCTG < 41bp 0.4347633361746 0.825673482089577 0.16841945 0.25943786 prediction 0.651346964179154 Functional Gain - NEUROD4 ENSG00000123307 CDS Human protein_coding chr12:55420632 chr12:55420633 stopgain 1.000 1 22 hPsi_associated_SNPs_28328 0 0 0 0 0 Cytosol 0.4387185929951 0.438718592995103 0 0 hPsi_site_22052 iPseU_CNN:0;iRNA_PseU:0 22053 chr10 134219163 134219163 1 + G A LUSC 134219162 + 134219142 134219182 41 TTGTCTTCTGGAAGTTCGGGTGAGGACGATGACTTCAAGAG TTGTCTTCTGGAAGTTCGGGTAAGGACGATGACTTCAAGAG < 41bp 0.572635976520965 0.898308092524329 0.3178888 0.41926652 prediction 0.651344232006728 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219162 chr10:134219163 nonsynonymous SNV 0.505 3 22 hPsi_associated_SNPs_28329 0 0 1 0 0 chromatin 0.43841515971628 0.438719848482166 0 0 hPsi_site_22053 iPseU_CNN:0;iRNA_PseU:0 22054 chr1 64089322 64089322 1 + C A UCEC 64089321 + 64089301 64089341 41 TCATCCAGAGTATATTCTTTTCCATAGACCTAAAAGATCGC TCATCCAGAGTATATTCTTTTACATAGACCTAAAAGATCGC < 41bp 0.534298996940599 0.859963428018692 0.30524075 0.3475086 prediction 0.651328862156185 Functional Gain - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64089321 chr1:64089322 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28330 0 0 0 0 0 Ribosome 0.43871507180894 0.438718436340646 0 0 hPsi_site_22054 iPseU_CNN:0;iRNA_PseU:0 22055 chr11 55579557 55579557 1 + G A HNSC 55579556 + 55579536 55579576 41 GCTGTTCCTGGTGGCCACTTTGAATGAGAGTGTTACCATCA GCTGTTCCTGGTGGCCACTTTAAATGAGAGTGTTACCATCA < 41bp 0.555398930784113 0.881056493268065 0.19232866 0.37370592 prediction 0.651315124967904 Functional Gain - OR5L1 ENSG00000186117 CDS Human other chr11:55579556 chr11:55579557 synonymous SNV . 0 22 hPsi_associated_SNPs_28331 0 0 0 0 0 unknown 0.438941997317203 0.439461103268884 0 0 hPsi_site_22055 iPseU_CNN:0;iRNA_PseU:0 22056 chr9 139235587 139235587 1 + C A COAD 139235586 + 139235566 139235606 41 AATGGCGCCTACAAGCCAGTTCTTCTTGGCCTCAGGGACAG AATGGCGCCTACAAGCCAGTTATTCTTGGCCTCAGGGACAG < 41bp 0.523135587411162 0.848790580121639 0.38202494 0.44142056 prediction 0.651309985420954 Functional Gain - GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139235586 chr9:139235587 nonsynonymous SNV 0.428 0 22 hPsi_associated_SNPs_28332 0 0 0 0 0 Cytosol 0.438717988652481 0.438718592089714 0 0 hPsi_site_22056 iPseU_CNN:0;iRNA_PseU:0 22057 chrX 46433945 46433945 1 + C A LUAD 46433944 + 46433924 46433964 41 TCTTACCACGGCCGCCCTCTTCCGCTGGCGGACTAACAAGG TCTTACCACGGCCGCCCTCTTACGCTGGCGGACTAACAAGG < 41bp 0.470187525887688 0.8256544744041 0.44010732 0.72046006 prediction 0.6513089488082 Functional Gain - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46433944 chrX:46433945 nonsynonymous SNV 0.754 4 22 hPsi_associated_SNPs_28333 0 0 0 0 0 Endoplasmic reticulum 0.438718593627147 0.438718588367957 0.44092012 0 hPsi_site_22057 iPseU_CNN:0.44092012;iRNA_PseU:0 22058 chr11 6231294 6231294 1 + G A UCEC 6231293 + 6231273 6231313 41 CTGAGGGTGCCTTCGCCCACTGCACTCGGGAATACTCACCA CTGAGGGTGCCTTCGCCCACTACACTCGGGAATACTCACCA < 41bp 0.578960012206758 0.90461378603261 0.26669517 0.5088595 prediction 0.651307547651703 Functional Gain - C11orf42 ENSG00000180878 CDS Human protein_coding chr11:6231293 chr11:6231294 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28334 0 0 0 0 0 exosome 0.439181540599928 0.438577909263064 0.017719 0 hPsi_site_22058 iPseU_CNN:0.017719;iRNA_PseU:0 22059 chr5 140476030 140476030 1 + G A SKCM 140476029 + 140476009 140476049 41 CGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACA CGAGGCGCTGGTGCGCGTGCTAGTGCTGGACGCCAACGACA < 41bp 0.42075513081148 0.825653184978556 0.18521956 0.60016835 prediction 0.651306369957113 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476029 chr5:140476030 synonymous SNV . 0 22 hPsi_associated_SNPs_28335 0 0 0 0 0 exosome 0.433939859962666 0.411267167534691 0.2003367 0 hPsi_site_22059 iPseU_CNN:0.2003367;iRNA_PseU:0 22060 chr5 172410887 172410887 1 + G A rs35000513 172410886 + 172410866 172410906 41 GGCGTATCACGGCCTCACTGTGCCTCTCATTGTGATGAGCG GGCGTATCACGGCCTCACTGTACCTCTCATTGTGATGAGCG < 41bp 0.423729486820812 0.825652281458977 0.32805866 0.8505523 prediction 0.651304562917953 Functional Gain - ATP6V0E1 ENSG00000113732 CDS Human protein_coding chr5:172410886 chr5:172410887 synonymous SNV . 0 22 hPsi_associated_SNPs_28336 0 0 1 0 1 Ribosome 0.438711388579843 0.439055270334373 0.7011046 0 hPsi_site_22060 iPseU_CNN:0.7011046;iRNA_PseU:0 22061 chr22 46240090 46240090 1 + G A rs9626460 46240089 + 46240069 46240109 41 AGAACCCTCCCTCTTCATTTTGGGTACTGGGCTGTCTTGTC AGAACCCTCCCTCTTCATTTTAGGTACTGGGCTGTCTTGTC < 41bp 0.563040741412774 0.888690124453842 0.30044746 0.35502887 prediction 0.651298766082135 Functional Gain - ATXN10 ENSG00000130638 UTR3 Human protein_coding chr22:46240089 chr22:46240090 . . 0 22 hPsi_associated_SNPs_28337 0 0 0 1 0 Cytosol 0.438718377320888 0.438713315527909 0 0 hPsi_site_22061 iPseU_CNN:0;iRNA_PseU:0 22062 chr5 33937208 33937208 1 + C A LUAD 33937207 + 33937187 33937227 41 GTCCTCTATCAACCTCTTCGTCACCAACCTGGCGCTGACGG GTCCTCTATCAACCTCTTCGTAACCAACCTGGCGCTGACGG < 41bp 0.534571464722351 0.860220548541426 0.110836685 0.24339277 prediction 0.651298167638151 Functional Gain - RXFP3 ENSG00000182631 CDS Human protein_coding chr5:33937207 chr5:33937208 synonymous SNV . 0 22 hPsi_associated_SNPs_28338 0 0 0 0 0 unknown 0.438718399146344 0.438718593792805 0 0 hPsi_site_22062 iPseU_CNN:0;iRNA_PseU:0 22063 chr7 150389519 150389519 1 + G A CESC 150389518 + 150389498 150389538 41 ATCCTCAGGAAGCAAGCATTTGAATCGAAGCTGGGTTCCCA ATCCTCAGGAAGCAAGCATTTAAATCGAAGCTGGGTTCCCA < 41bp 0.428791365169464 0.825644325010871 0.6595186 0.8316443 prediction 0.651288650021743 Functional Gain - GIMAP2 ENSG00000106560 CDS Human protein_coding chr7:150389518 chr7:150389519 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_28339 0 0 0 0 0 exosome 0.438719000267918 0.438718593017412 0.3442514 0 hPsi_site_22063 iPseU_CNN:0.3442514;iRNA_PseU:0 22064 chr7 149561236 149561236 1 + G A UCEC 149561235 + 149561215 149561255 41 GAGGAGATGGGAGCCCTCTATGTGGAGGAGCCCAGGACCCA GAGGAGATGGGAGCCCTCTATATGGAGGAGCCCAGGACCCA < 41bp 0.417978399893631 0.82564401613228 0.50659275 0.6760412 prediction 0.65128803226456 Functional Gain - ZNF862 ENSG00000106479 CDS Human protein_coding chr7:149561235 chr7:149561236 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28340 0 0 0 0 1 exosome 0.438718592994584 0.438718592974261 0.3388969 0 hPsi_site_22064 iPseU_CNN:0.3388969;iRNA_PseU:0 22065 chr19 53762031 53762031 1 + G A UCEC 53762030 + 53762010 53762050 41 CTCAGGCACCTGACTGTAGCTGACTCCTTGGTTATCCTATC CTCAGGCACCTGACTGTAGCTAACTCCTTGGTTATCCTATC < 41bp 0.435030164463844 0.825643757058989 0.22180346 0.64529985 prediction 0.651287514117978 Functional Gain - VN1R2 ENSG00000196131 CDS Human protein_coding chr19:53762030 chr19:53762031 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_28341 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.2905997 0 hPsi_site_22065 iPseU_CNN:0.2905997;iRNA_PseU:0 22066 chr13 61034638 61034638 1 + G A STAD 61034637 + 61034617 61034657 41 TGACTGATGGTCATATAAGTTGCACAGCAGTAGAATTTAGT TGACTGATGGTCATATAAGTTACACAGCAGTAGAATTTAGT < 41bp 0.424731794302555 0.825642005581212 0.19946337 0.5829446 prediction 0.651284011162424 Functional Gain - TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61034637 chr13:61034638 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28342 0 0 1 0 1 Cytosol 0.438839072190812 0.438885671636952 0.1658892 0 hPsi_site_22066 iPseU_CNN:0.1658892;iRNA_PseU:0 22067 chr10 102222947 102222947 1 + G A SKCM 102222946 + 102222926 102222966 41 ATGTTTCTTTCAAAGCCTTCTGTGTACATCTGTCTTTTCAC ATGTTTCTTTCAAAGCCTTCTATGTACATCTGTCTTTTCAC < 41bp 0.439668356713215 0.825637463709223 0.17944992 0.19463706 prediction 0.651274927418446 Functional Gain - WNT8B ENSG00000075290 CDS Human protein_coding chr10:102222946 chr10:102222947 nonsynonymous SNV 0.484 0 22 hPsi_associated_SNPs_28343 0 0 0 0 1 exosome 0.438221094929465 0.438657697029039 0 0 hPsi_site_22067 iPseU_CNN:0;iRNA_PseU:0 22068 chr22 24226004 24226004 1 + G A LAML 24226003 + 24225983 24226023 41 CGGCGCGTGCTGCTCATCGGTGGGTACAGCCTGATGACCTG CGGCGCGTGCTGCTCATCGGTAGGTACAGCCTGATGACCTG < 41bp 0.396658918760556 0.825627034354148 0.25495985 0.47801676 prediction 0.651254068708297 Functional Gain - SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24226003 chr22:24226004 nonsynonymous SNV 0.050 5 22 hPsi_associated_SNPs_28344 0 0 0 0 1 nucleoplasm 0.439584639308142 0.438777546334559 0 0 hPsi_site_22068 iPseU_CNN:0;iRNA_PseU:0 22069 chr22 50921119 50921119 1 + G A rs200200067 50921118 + 50921098 50921138 41 TGCCGGCCTGGCCCCTGTTATGGGTCAGCCTCTCCGGGATG TGCCGGCCTGGCCCCTGTTATAGGTCAGCCTCTCCGGGATG < 41bp 0.429407440445891 0.825626045607788 0.3934627 0.71796054 prediction 0.651252091215575 Functional Gain - ADM2 ENSG00000128165 CDS Human protein_coding chr22:50921118 chr22:50921119 nonsynonymous SNV 0.035 0 22 hPsi_associated_SNPs_28345 0 0 0 0 0 nucleolus 0.438720926530633 0.438718530847568 0.43592108 0 hPsi_site_22069 iPseU_CNN:0.43592108;iRNA_PseU:0 22070 chr18 47917607 47917607 1 + C A UCEC 47917606 + 47917586 47917626 41 AGCCAAAAAAGTCTATGAATTCTGTGACCAGAAATCTCTAT AGCCAAAAAAGTCTATGAATTATGTGACCAGAAATCTCTAT < 41bp 0.530274540798378 0.855900325129736 0.2833737 0.47973043 prediction 0.651251568662716 Functional Gain - SKA1 ENSG00000154839 CDS Human protein_coding chr18:47917606 chr18:47917607 nonsynonymous SNV 0.995 2 22 hPsi_associated_SNPs_28346 0 0 0 0 1 Cytosol 0.438718593437542 0.43871859818395 0 0 hPsi_site_22070 iPseU_CNN:0;iRNA_PseU:0 22071 chr17 40947762 40947762 1 + C T HNSC 40947763 - 40947743 40947783 41 CTGAGCTCTCTGAAGTGAGCTGAGGGGTTGAAGGTTTTGGA CTGAGCTCTCTGAAGTGAGCTAAGGGGTTGAAGGTTTTGGA < 41bp 0.426900670241798 0.825620185832015 0.28496623 0.47971892 prediction 0.65124037166403 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947763 chr17:40947762 stopgain 0.997 0 22 hPsi_associated_SNPs_28347 0 0 0 0 0 chromatin 0.438722349708777 0.438716897919277 0 0 hPsi_site_22071 iPseU_CNN:0;iRNA_PseU:0 22072 chr1 34663196 34663196 1 + G A BLCA 34663195 + 34663175 34663215 41 GACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAG GACAGGGGCCGCATCCTAGGTAACTCCAACTTGCAAGTCAG < 41bp 0.572188166902823 0.897800148164077 0.2496328 0.44982627 prediction 0.651223962522508 Functional Gain - C1orf94 ENSG00000142698 CDS Human protein_coding chr1:34663195 chr1:34663196 nonsynonymous SNV 0.135 0 22 hPsi_associated_SNPs_28348 0 0 0 0 0 unknown 0.438718592993983 0.438718592995102 0 0 hPsi_site_22072 iPseU_CNN:0;iRNA_PseU:0 22073 chr15 76463362 76463362 1 + C A UCEC 76463361 + 76463341 76463381 41 ACGGGGCTGTGATCATCCTATCTTTGGCTCCGATGGTGGCA ACGGGGCTGTGATCATCCTATATTTGGCTCCGATGGTGGCA < 41bp 0.55467242948222 0.880281386754136 0.5943825 0.69380176 prediction 0.651217914543832 Functional Gain - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76463361 chr15:76463362 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_28349 0 0 0 0 1 Nucleus 0.438718592995003 0.438718593325318 0.19883852 0 hPsi_site_22073 iPseU_CNN:0.19883852;iRNA_PseU:0 22074 chr20 57876762 57876762 1 + G A SKCM 57876761 + 57876741 57876781 41 ATTGCCACCTGGACATCATTTGGATCAACACTCCCGAGTAA ATTGCCACCTGGACATCATTTAGATCAACACTCCCGAGTAA < 41bp 0.578534903935271 0.904142747761367 0.42325816 0.641562 prediction 0.651215687652194 Functional Gain - EDN3 ENSG00000124205 CDS Human protein_coding chr20:57876761 chr20:57876762 stopgain 1.000 1 22 hPsi_associated_SNPs_28350 0 0 0 0 1 exosome 0.438865354376698 0.438716360685792 0.283124 0 hPsi_site_22074 iPseU_CNN:0.283124;iRNA_PseU:0 22075 chr15 92981601 92981601 1 + C A UCEC 92981600 + 92981580 92981620 41 CAGGAAGCAGATTTTAAAGTTCTTGGATGCTGAAAAGGACA CAGGAAGCAGATTTTAAAGTTATTGGATGCTGAAAAGGACA < 41bp 0.464834332939709 0.825603339209777 0.28295842 0.33028126 prediction 0.651206678419554 Functional Gain - ST8SIA2 ENSG00000140557 CDS Human protein_coding chr15:92981600 chr15:92981601 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28351 0 0 0 0 1 Nucleus 0.438820500765401 0.438780056665185 0 0 hPsi_site_22075 iPseU_CNN:0;iRNA_PseU:0 22076 chr4 108829792 108829792 1 + C A UCEC 108829791 + 108829771 108829811 41 GCTGCCGGGATCATCTGCATTCTTGTAGCACACGAACACTA GCTGCCGGGATCATCTGCATTATTGTAGCACACGAACACTA < 41bp 0.542516914095177 0.86811952587534 0.38295355 0.5946527 prediction 0.651205223560326 Functional Gain - SGMS2 ENSG00000164023 CDS Human protein_coding chr4:108829791 chr4:108829792 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28352 0 0 1 0 2 Ribosome 0.438645171904499 0.438458964042039 0.1893054 0 hPsi_site_22076 iPseU_CNN:0.1893054;iRNA_PseU:0 22077 chr12 47629785 47629785 1 + C A LUSC 47629784 + 47629764 47629804 41 ACCCCAGCGCTTGCCGCTGCTCCCGCTCCTGTCCCCACAGC ACCCCAGCGCTTGCCGCTGCTACCGCTCCTGTCCCCACAGC < 41bp 0.540698775973386 0.866300062411929 0.22838005 0.6351699 prediction 0.651202572877086 Functional Gain - PCED1B ENSG00000179715 CDS Human protein_coding chr12:47629784 chr12:47629785 synonymous SNV . 0 22 hPsi_associated_SNPs_28353 0 0 0 0 0 Nucleus 0.438718911091857 0.438609644149644 0.2703398 0 hPsi_site_22077 iPseU_CNN:0.2703398;iRNA_PseU:0 22078 chr16 29376178 29376178 1 + G A SKCM 29376177 + 29376157 29376197 41 GTCAATATCATGTCCGCCTTTGAAAGCCCCTTCGGGCCAAA GTCAATATCATGTCCGCCTTTAAAAGCCCCTTCGGGCCAAA < 41bp 0.571983640962616 0.897582062814287 0.47116002 0.6673999 prediction 0.651196843703342 Functional Gain - SNX29P2 ENSG00000198106;ENSG00000271699 ncRNA_exonic Human other chr16:29376177 chr16:29376178 . . 0 22 hPsi_associated_SNPs_28354 0 0 0 0 0 unknown 0.438714012610328 0.438718573631274 0.3347998 0 hPsi_site_22078 iPseU_CNN:0.3347998;iRNA_PseU:0 22079 chr11 3681097 3681097 1 + G A rs139321904 3681096 + 3681076 3681116 41 CTTCCGCGATGAGCATGGGGTGGCCCTCCTGGCCTACACAG CTTCCGCGATGAGCATGGGGTAGCCCTCCTGGCCTACACAG < 41bp 0.415262246442112 0.825590244615298 0.30102354 0.6583654 prediction 0.651180489230596 Functional Gain - ART1 ENSG00000129744 CDS Human protein_coding chr11:3681096 chr11:3681097 synonymous SNV . 0 22 hPsi_associated_SNPs_28355 0 0 0 0 0 exosome 0.44014520400933 0.438770408856791 0.3167308 0 hPsi_site_22079 iPseU_CNN:0.3167308;iRNA_PseU:0 22080 chr3 122288679 122288679 1 + C A UCEC 122288678 + 122288658 122288698 41 ACCAAAGTGCAAGCATGAATTCTGCGCCCCTTGTATCAACA ACCAAAGTGCAAGCATGAATTATGCGCCCCTTGTATCAACA < 41bp 0.480168039303562 0.825587932390959 0.34588885 0.6003232 prediction 0.651175864781918 Functional Gain - DTX3L ENSG00000163840 CDS Human protein_coding chr3:122288678 chr3:122288679 nonsynonymous SNV 0.964 5 22 hPsi_associated_SNPs_28356 0 0 0 0 0 Nucleus 0.438739977414174 0.438731549578179 0.2006464 0 hPsi_site_22080 iPseU_CNN:0.2006464;iRNA_PseU:0 22081 chr14 105204723 105204723 1 + G T LUSC 105204722 + 105204702 105204742 41 CTCTCATGCAGGCAACGGGGTGGTCATCCACTTGCCAGGCT CTCTCATGCAGGCAACGGGGTTGTCATCCACTTGCCAGGCT < 41bp 0.501586922482927 0.827174479475451 0.25169635 0.61114126 prediction 0.651175113985047 Functional Gain - ADSSL1 ENSG00000185100 CDS Human protein_coding chr14:105204722 chr14:105204723 synonymous SNV . 0 22 hPsi_associated_SNPs_28357 0 0 1 0 2 Cytosol 0.43871903359481 0.438716483598571 0.22228252 0 hPsi_site_22081 iPseU_CNN:0.22228252;iRNA_PseU:0 22082 chr12 34175693 34175693 1 + C A COAD 34175692 + 34175672 34175712 41 GCGCTACTGTGAGGGCCATTTCTCCCTTTCCCAGGTGGGGT GCGCTACTGTGAGGGCCATTTATCCCTTTCCCAGGTGGGGT < 41bp 0.486155437205648 0.825573942308864 0.27743313 0.48426735 prediction 0.651147884617729 Functional Gain - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34175692 chr12:34175693 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_28358 0 0 1 0 1 Ribosome 0.43871611846113 0.438718377317722 0 0 hPsi_site_22082 iPseU_CNN:0;iRNA_PseU:0 22083 chr12 112321565 112321565 1 + G A READ 112321564 + 112321544 112321584 41 TCAGAGATGGCCAAAGATGTTGTGAGGAAGTGAGTTCACGG TCAGAGATGGCCAAAGATGTTATGAGGAAGTGAGTTCACGG < 41bp 0.411406672625325 0.825573178204277 0.18038386 0.24296474 prediction 0.651146356408553 Functional Gain - MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321564 chr12:112321565 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28359 0 0 1 0 1 chromatin 0.438729107785683 0.438732121986029 0 0 hPsi_site_22083 iPseU_CNN:0;iRNA_PseU:0 22084 chr11 20483611 20483611 1 + C A UCEC 20483610 + 20483590 20483630 41 AATTGCTTTTTGGGATGATGTCTATGGCTTCAAGATGTCCT AATTGCTTTTTGGGATGATGTATATGGCTTCAAGATGTCCT < 41bp 0.533055194234075 0.858621476652257 0.32798436 0.35784906 prediction 0.651132564836363 Functional Gain - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20483610 chr11:20483611 synonymous SNV . 0 22 hPsi_associated_SNPs_28360 0 0 1 0 1 Ribosome 0.443597053451673 0.438718171771195 0 0 hPsi_site_22084 iPseU_CNN:0;iRNA_PseU:0 22085 chr16 2279576 2279576 1 + G A rs149377192 2279575 + 2279555 2279595 41 CTTCCCCCTTTGGCAGGTGGTGCCGGCAGCACCAGGCCCAG CTTCCCCCTTTGGCAGGTGGTACCGGCAGCACCAGGCCCAG < 41bp 0.406674648029282 0.825561569627435 0.19337398 0.70076007 prediction 0.651123139254869 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2279575 chr16:2279576 synonymous SNV . 0 22 hPsi_associated_SNPs_28361 0 0 1 0 1 chromatin 0.438718593078224 0.43871859298564 0.40152014 0 hPsi_site_22085 iPseU_CNN:0.40152014;iRNA_PseU:0 22086 chrX 108785765 108785765 1 + C A UCEC 108785764 + 108785744 108785784 41 ACTCAGTCCCAAACTACAGTTCTTGTTGTGACCAGTGGAAC ACTCAGTCCCAAACTACAGTTATTGTTGTGACCAGTGGAAC < 41bp 0.483610667436135 0.825557903757685 0.25091556 0.43314207 prediction 0.651115807515371 Functional Gain - NXT2 ENSG00000101888 CDS Human protein_coding chrX:108785764 chrX:108785765 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_28362 0 0 0 0 1 Ribosome 0.438721049042148 0.43873627861264 0 0 hPsi_site_22086 iPseU_CNN:0;iRNA_PseU:0 22087 chr6 46721623 46721623 1 + G A KIRC 46721622 + 46721602 46721642 41 ATCGACGCCCCTGACTTCTTTGGAGACACACCGAAGAGGAT ATCGACGCCCCTGACTTCTTTAGAGACACACCGAAGAGGAT < 41bp 0.580463024318789 0.90601289233918 0.287614 0.5595937 prediction 0.651099736040782 Functional Gain - ANKRD66 ENSG00000230062 CDS Human protein_coding chr6:46721622 chr6:46721623 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_28363 0 0 0 0 1 unknown 0.438726103261484 0.438712332202529 0.1191874 0 hPsi_site_22087 iPseU_CNN:0.1191874;iRNA_PseU:0 22088 chr7 143771847 143771847 1 + G A SKCM 143771846 + 143771826 143771866 41 AAACTTAATCACTTTTTCTGTGAAATTATGGCTGTTCTCAA AAACTTAATCACTTTTTCTGTAAAATTATGGCTGTTCTCAA < 41bp 0.436631795387135 0.825549087535649 0.30250323 0.48597813 prediction 0.651098175071299 Functional Gain - OR2A25 ENSG00000221933 CDS Human protein_coding chr7:143771846 chr7:143771847 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28364 0 0 0 0 0 unknown 0.438720385160838 0.438713382673925 0 0 hPsi_site_22088 iPseU_CNN:0;iRNA_PseU:0 22089 chr9 135926201 135926201 1 + G A HNSC 135926200 + 135926180 135926220 41 AACAATCCCCCCATCTCAGGTGAGAATCTGATTGGCCTGAG AACAATCCCCCCATCTCAGGTAAGAATCTGATTGGCCTGAG < 41bp 0.578896255195966 0.904438762712647 0.32789794 0.55527174 prediction 0.651085015033363 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926200 chr9:135926201 nonsynonymous SNV 0.357 0 22 hPsi_associated_SNPs_28365 0 0 1 0 1 Ribosome 0.438718596500541 0.43871859048967 0.11054348 0 hPsi_site_22089 iPseU_CNN:0.11054348;iRNA_PseU:0 Type 2 diabetes 22090 chr15 25467505 25467505 1 + G A LUSC 25467504 + 25467484 25467524 41 GCCCTGGGTTGGGGTGGTGATGAGAACCTTGTATTCTTCTG GCCCTGGGTTGGGGTGGTGATAAGAACCTTGTATTCTTCTG < 41bp 0.481146122849382 0.825541455700337 0.30902782 0.33239177 prediction 0.651082911400673 Functional Gain - SNORD115-28 ENSG00000200801 ncRNA_exonic Human snoRNA chr15:25467504 chr15:25467505 . . 0 22 hPsi_associated_SNPs_28366 0 0 0 2 0 unknown 0.438400121133009 0.438717740683876 0 0 hPsi_site_22090 iPseU_CNN:0;iRNA_PseU:0 22091 chr13 33629320 33629320 1 + G T LUAD 33629319 + 33629299 33629339 41 AAGCCAGGACAAGATGTTGTTGCCAAAGTCTTCAGCCTTGT AAGCCAGGACAAGATGTTGTTTCCAAAGTCTTCAGCCTTGT < 41bp 0.516240397339509 0.8417764661549 0.29738802 0.30876866 prediction 0.651072137630781 Functional Gain - KL ENSG00000133116 CDS Human protein_coding chr13:33629319 chr13:33629320 nonsynonymous SNV 0.974 0 22 hPsi_associated_SNPs_28367 0 0 0 0 0 exosome 0.436166273754021 0.438725363445843 0 0 hPsi_site_22091 iPseU_CNN:0;iRNA_PseU:0 22092 chr1 248085232 248085232 1 + C A rs6695357 248085231 + 248085211 248085251 41 GCCCTGACAAGGTGTATGGGTCGGTGTGTGGCCTTAAGTCG GCCCTGACAAGGTGTATGGGTAGGTGTGTGGCCTTAAGTCG < 41bp 0.494489737325769 0.825531431270774 0.19039932 0.33074623 prediction 0.651062862541548 Functional Gain - OR2T8 ENSG00000177462 CDS Human protein_coding chr1:248085231 chr1:248085232 synonymous SNV . 0 22 hPsi_associated_SNPs_28368 0 0 0 0 0 exosome 0.438718592988091 0.438718593262267 0 0 hPsi_site_22092 iPseU_CNN:0;iRNA_PseU:0 22093 chr1 76257209 76257209 1 + G A STAD 76257208 + 76257188 76257228 41 GTTTTATCCTGTATGAACTTTGACGGTGGATTTGGTTGCAG GTTTTATCCTGTATGAACTTTAACGGTGGATTTGGTTGCAG < 41bp 0.436508719598131 0.825529092840842 0.2009849 0.2994316 prediction 0.651058185681683 Functional Gain - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76257208 chr1:76257209 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28369 0 0 1 0 2 Nucleus 0.438719881766492 0.43871534335955 0 0 hPsi_site_22093 iPseU_CNN:0;iRNA_PseU:0 22094 chr7 86415985 86415985 1 + G A HNSC 86415984 + 86415964 86416004 41 GCAGCCGCCAGCCGCGCCAATGCCTCCTTCACCTGGGTGGC GCAGCCGCCAGCCGCGCCAATACCTCCTTCACCTGGGTGGC < 41bp 0.404787943685986 0.825528820092065 0.21698058 0.346241 prediction 0.65105764018413 Functional Gain - GRM3 ENSG00000198822 CDS Human protein_coding chr7:86415984 chr7:86415985 nonsynonymous SNV 0.953 1 22 hPsi_associated_SNPs_28370 0 0 0 0 0 Endoplasmic reticulum 0.438718593014233 0.438718592989602 0 0 hPsi_site_22094 iPseU_CNN:0;iRNA_PseU:0 22095 chr17 48603317 48603317 1 + G A BLCA 48603316 + 48603296 48603336 41 ATGACCCTGCCCGCCAAGGCTGAGGAGGCCAGGCCAGGGGA ATGACCCTGCCCGCCAAGGCTAAGGAGGCCAGGCCAGGGGA < 41bp 0.417472445865496 0.825526404303423 0.2514285 0.4285685 prediction 0.651052808606845 Functional Gain - MYCBPAP ENSG00000136449 CDS Human protein_coding chr17:48603316 chr17:48603317 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28371 0 0 0 0 1 exosome 0.438720889770558 0.438718593091057 0 0 hPsi_site_22095 iPseU_CNN:0;iRNA_PseU:0 22096 chr4 113350368 113350368 1 + G A STAD 113350367 + 113350347 113350387 41 GAAGCCTGCAAGCTGGCAGCTGCCTTCAGTGCCTATACGCC GAAGCCTGCAAGCTGGCAGCTACCTTCAGTGCCTATACGCC < 41bp 0.400844339538252 0.825523136795289 0.30220437 0.7162829 prediction 0.651046273590577 Functional Gain - ALPK1 ENSG00000073331 CDS Human protein_coding chr4:113350367 chr4:113350368 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_28372 0 0 0 0 2 chromatin 0.43871450141073 0.438715035585285 0.4325658 0 hPsi_site_22096 iPseU_CNN:0.4325658;iRNA_PseU:0 22097 chr11 43911305 43911305 1 + G A CESC 43911304 + 43911284 43911324 41 GTATCCTGGCTTTGTTGACGTGAAAGAAGCTGACTGGATAT GTATCCTGGCTTTGTTGACGTAAAAGAAGCTGACTGGATAT < 41bp 0.420817965287834 0.825522123511454 0.2804129 0.32249647 prediction 0.651044247022909 Functional Gain - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43911304 chr11:43911305 synonymous SNV . 0 22 hPsi_associated_SNPs_28373 0 0 1 0 0 Ribosome 0.439240032387975 0.437274327827682 0 0 hPsi_site_22097 iPseU_CNN:0;iRNA_PseU:0 22098 chr2 131520572 131520572 1 + C A UCEC 131520571 + 131520551 131520591 41 AGCCTCTGACTTCACCAGGTTCTGGGACAGTGTGAATCGCT AGCCTCTGACTTCACCAGGTTATGGGACAGTGTGAATCGCT < 41bp 0.541435465432156 0.866957579318441 0.23771983 0.3431999 prediction 0.65104422777257 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131520571 chr2:131520572 nonsynonymous SNV 0.921 1 22 hPsi_associated_SNPs_28374 0 0 0 0 0 Nucleus 0.438735298971079 0.438810231483424 0 0 hPsi_site_22098 iPseU_CNN:0;iRNA_PseU:0 22099 chrX 79698360 79698360 1 + C A LUAD 79698359 + 79698339 79698379 41 AAAGATGCAGTTCTAGACTGTCTACTTGACTTTTTACCAAA AAAGATGCAGTTCTAGACTGTATACTTGACTTTTTACCAAA < 41bp 0.478373631981501 0.825518054464405 0.24288768 0.33304828 prediction 0.651036108928811 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79698359 chrX:79698360 nonsynonymous SNV 0.909 3 22 hPsi_associated_SNPs_28375 0 0 0 0 0 unknown 0.438660272318201 0.438572888913461 0 0 hPsi_site_22099 iPseU_CNN:0;iRNA_PseU:0 22100 chr5 53751901 53751901 1 + G A rs7699 53751900 + 53751880 53751920 41 TCAGACCTTCGAAGGCTGGCTGCTGATAAAAGCACAACACG TCAGACCTTCGAAGGCTGGCTACTGATAAAAGCACAACACG < 41bp 0.560871744764188 0.886386988097225 0.13068706 0.26162922 prediction 0.651030486666073 Functional Gain - HSPB3 ENSG00000169271 CDS Human protein_coding chr5:53751900 chr5:53751901 synonymous SNV . 0 22 hPsi_associated_SNPs_28376 1 0 0 0 0 exosome 0.438851396350048 0.448772868965482 0 0 hPsi_site_22100 iPseU_CNN:0;iRNA_PseU:0 22101 chr3 182988077 182988077 1 + C A UCEC 182988076 + 182988056 182988096 41 TTCAGCAAGACTTTGTTGATTCTTTCTACAATCTTACTCTG TTCAGCAAGACTTTGTTGATTATTTCTACAATCTTACTCTG < 41bp 0.521946640508536 0.847461816047021 0.2620926 0.34420943 prediction 0.651030351076971 Functional Gain - B3GNT5 ENSG00000176597 CDS Human protein_coding chr3:182988076 chr3:182988077 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28377 0 0 1 0 0 Cytosol 0.438811465474263 0.438389478035823 0 0 hPsi_site_22101 iPseU_CNN:0;iRNA_PseU:0 22102 chr14 38678915 38678915 1 + C A BLCA 38678914 + 38678894 38678934 41 GGCCATTGCTGATGAGCTGCTCATGCTCAGCGTGCCCTTCC GGCCATTGCTGATGAGCTGCTAATGCTCAGCGTGCCCTTCC < 41bp 0.538730794727625 0.864240120046208 0.15081546 0.33426914 prediction 0.651018650637166 Functional Gain - SSTR1 ENSG00000139874 CDS Human protein_coding chr14:38678914 chr14:38678915 synonymous SNV . 0 22 hPsi_associated_SNPs_28378 0 0 0 0 0 nucleus 0.438660452988774 0.438718495762322 0 0 hPsi_site_22102 iPseU_CNN:0;iRNA_PseU:0 22103 chr4 175897277 175897277 1 + G A SKCM 175897276 + 175897256 175897296 41 TGGATCCATTTTAGGATTGTTGAAATTGTAGTCGTCATTGA TGGATCCATTTTAGGATTGTTAAAATTGTAGTCGTCATTGA < 41bp 0.439661213008261 0.825504018377141 0.19495025 0.26341665 prediction 0.651008036754282 Functional Gain - ADAM29 ENSG00000168594 CDS Human protein_coding chr4:175897276 chr4:175897277 nonsynonymous SNV 0.022 1 22 hPsi_associated_SNPs_28379 0 0 0 0 0 exosome 0.438713528980206 0.438726648158347 0 0 hPsi_site_22103 iPseU_CNN:0;iRNA_PseU:0 22104 chr17 60813484 60813484 1 + C A COAD 60813483 + 60813463 60813503 41 AAATGGCCTTCTGAGTTCATTCTTGATGGAGAGGAGCTGGA AAATGGCCTTCTGAGTTCATTATTGATGGAGAGGAGCTGGA < 41bp 0.517737777394978 0.843239952098427 0.26476663 0.30655813 prediction 0.651004349406898 Functional Gain - MARCH10 ENSG00000173838 CDS Human protein_coding chr17:60813483 chr17:60813484 nonsynonymous SNV 0.068 3 22 hPsi_associated_SNPs_28380 0 0 0 0 1 nucleus 0.438718592836795 0.438716770897419 0 0 hPsi_site_22104 iPseU_CNN:0;iRNA_PseU:0 22105 chr19 8841798 8841798 1 + G A SKCM 8841797 + 8841777 8841817 41 CCTGCAGTATCCTGTACTTATGAGACGCCAGGTATGTCTGC CCTGCAGTATCCTGTACTTATAAGACGCCAGGTATGTCTGC < 41bp 0.43524518892989 0.825497160982097 0.5140042 0.60401374 prediction 0.650994321964194 Functional Gain - OR2Z1 ENSG00000181733 CDS Human protein_coding chr19:8841797 chr19:8841798 nonsynonymous SNV 0.161 3 22 hPsi_associated_SNPs_28381 0 0 0 0 0 unknown 0.438718061173859 0.43859501155368 0.18001908 0 hPsi_site_22105 iPseU_CNN:0.18001908;iRNA_PseU:0 22106 chr1 147091935 147091935 1 + G A CESC 147091934 + 147091914 147091954 41 CATCAGGCCCAGCATGGAGATGAACAGGATGATTCCAGGCT CATCAGGCCCAGCATGGAGATAAACAGGATGATTCCAGGCT < 41bp 0.406183535008687 0.825496513330767 0.30626735 0.4325793 prediction 0.650993026661533 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091934 chr1:147091935 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28382 0 0 1 0 0 Nucleus 0.438612915006958 0.438644769499186 0 0 hPsi_site_22106 iPseU_CNN:0;iRNA_PseU:0 22107 chr11 123894616 123894616 1 + G A SKCM 123894615 + 123894595 123894635 41 GGAGGTGAAGAAAGCTGTGTTGAAACTGAGAGACAAAGTAG GGAGGTGAAGAAAGCTGTGTTAAAACTGAGAGACAAAGTAG < 41bp 0.551279948256878 0.876771607533151 0.19939378 0.2808829 prediction 0.650983318552545 Functional Gain - OR10G9 ENSG00000236981 CDS Human protein_coding chr11:123894615 chr11:123894616 synonymous SNV . 0 22 hPsi_associated_SNPs_28383 0 0 0 0 0 unknown 0.438716828150138 0.438294302436171 0 0 hPsi_site_22107 iPseU_CNN:0;iRNA_PseU:0 22108 chr5 135382121 135382121 1 + G A SKCM 135382120 + 135382100 135382140 41 GGAGAAGCTGAGGCCTGAGATGGAGGGGCCCGGCAGCTTCA GGAGAAGCTGAGGCCTGAGATAGAGGGGCCCGGCAGCTTCA < 41bp 0.557369541472232 0.882854696288042 0.26916015 0.32590827 prediction 0.65097030963162 Functional Gain - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135382120 chr5:135382121 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28384 0 0 1 0 1 Endoplasmic reticulum 0.438718545796813 0.438718349383115 0 0 hPsi_site_22108 iPseU_CNN:0;iRNA_PseU:0 22109 chr20 44441761 44441761 1 + G A rs73911114 44441760 + 44441740 44441780 41 CCTTCCCTGGTGGGCCTAGATGAAGACGCTCAAGGACCCTC CCTTCCCTGGTGGGCCTAGATAAAGACGCTCAAGGACCCTC < 41bp 0.498460820534878 0.825484956624745 0.3490141 0.5802677 prediction 0.650969913249491 Functional Gain - UBE2C ENSG00000175063 UTR5 Human protein_coding chr20:44441760 chr20:44441761 . . 0 22 hPsi_associated_SNPs_28385 0 0 1 0 0 exosome 0.438718592995102 0.438718592995102 0.1605354 0 hPsi_site_22109 iPseU_CNN:0.1605354;iRNA_PseU:0 22110 chr11 65617998 65617998 1 + C A UCEC 65617997 + 65617977 65618017 41 CCTGCGTCGAGACCACAACTTCTTTGTGTTTTTGGAATATG CCTGCGTCGAGACCACAACTTATTTGTGTTTTTGGAATATG < 41bp 0.548488955034591 0.873969687050858 0.42165038 0.51243514 prediction 0.650961464032535 Functional Gain - SNX32 ENSG00000172803 CDS Human protein_coding chr11:65617997 chr11:65617998 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28386 0 0 0 2 1 nucleoplasm 0.438718589691145 0.438718593010354 0.02487028 0 hPsi_site_22110 iPseU_CNN:0.02487028;iRNA_PseU:0 22111 chr11 124789844 124789844 1 + C T OV 124789845 - 124789825 124789865 41 ATGCCCATGCCACCGCCTATTGAACAGTTCATAGGAGTGGC ATGCCCATGCCACCGCCTATTAAACAGTTCATAGGAGTGGC < 41bp 0.446604034741401 0.825474986769266 0.25259995 0.42258778 prediction 0.650949973538532 Functional Gain - HEPN1 ENSG00000221932 CDS Human protein_coding chr11:124789845 chr11:124789844 synonymous SNV . 0 22 hPsi_associated_SNPs_28387 0 0 0 0 0 nucleus 0.438826579593904 0.438719829336657 0 0 hPsi_site_22111 iPseU_CNN:0;iRNA_PseU:0 22112 chr1 40211152 40211152 1 + G A KIRP 40211151 + 40211131 40211171 41 CAGATGCTCCTGCGTTCTGATGTCGTGCCCATGACAGCAGG CAGATGCTCCTGCGTTCTGATATCGTGCCCATGACAGCAGG < 41bp 0.426219051620058 0.825460742552565 0.2325255 0.36536676 prediction 0.650921485105131 Functional Gain - PPIE ENSG00000084072 CDS Human protein_coding chr1:40211151 chr1:40211152 nonsynonymous SNV 0.147 1 22 hPsi_associated_SNPs_28388 0 0 1 0 2 Ribosome 0.438726591673209 0.438719019757353 0 0 hPsi_site_22112 iPseU_CNN:0;iRNA_PseU:0 22113 chr5 128994338 128994338 1 + C A COAD 128994337 + 128994317 128994357 41 GCTGTGATGGTTTATTAGGGTCTCTTGCAAGAGAAGATCAT GCTGTGATGGTTTATTAGGGTATCTTGCAAGAGAAGATCAT < 41bp 0.529866125510435 0.855323623589453 0.30133384 0.57586694 prediction 0.650914996158035 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:128994337 chr5:128994338 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28389 0 0 0 1 2 exosome 0.438718881332964 0.43871859356917 0.15173388 0 hPsi_site_22113 iPseU_CNN:0.15173388;iRNA_PseU:0 22114 chr10 102738955 102738955 1 + G A SKCM 102738954 + 102738934 102738974 41 CCACTGTATGAGACACTGCGTGGGGTCTGCAGCCTGGATGC CCACTGTATGAGACACTGCGTAGGGTCTGCAGCCTGGATGC < 41bp 0.405495339696354 0.82545338880125 0.22096804 0.31657192 prediction 0.650906777602501 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738954 chr10:102738955 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28390 0 0 1 0 2 nucleoplasm 0.438718498187564 0.43835338881095 0 0 hPsi_site_22114 iPseU_CNN:0;iRNA_PseU:0 22115 chr4 57889615 57889615 1 + G A BLCA 57889614 + 57889594 57889634 41 ACCTTGCCTGAAAATGAAGATGAATTGGAGAGCACCAATAG ACCTTGCCTGAAAATGAAGATAAATTGGAGAGCACCAATAG < 41bp 0.415207867089017 0.825452002732288 0.44531447 0.66420996 prediction 0.650904005464575 Functional Gain - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57889614 chr4:57889615 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_28391 0 0 1 0 0 Nucleus 0.436192777709967 0.431120352984336 0.32841992 0 hPsi_site_22115 iPseU_CNN:0.32841992;iRNA_PseU:0 22116 chr5 68709919 68709919 1 + G A CESC 68709918 + 68709898 68709938 41 ATAGACCCTGACAGCGGAGATGAAGCCCAGCTTAATGGAGG ATAGACCCTGACAGCGGAGATAAAGCCCAGCTTAATGGAGG < 41bp 0.442231289581258 0.825449975306169 0.22384185 0.61068976 prediction 0.650899950612338 Functional Gain - RAD17 ENSG00000152942 CDS Human protein_coding chr5:68709918 chr5:68709919 nonsynonymous SNV 0.718 1 22 hPsi_associated_SNPs_28392 0 0 1 0 1 Cytosol 0.438717969240466 0.438714639469388 0.22137952 0 hPsi_site_22116 iPseU_CNN:0.22137952;iRNA_PseU:0 22117 chr7 138235900 138235900 1 + C A UCEC 138235899 + 138235879 138235919 41 ATTTCACTGTGATCCTAGTTTCTGGGCTCAAAATATCATCA ATTTCACTGTGATCCTAGTTTATGGGCTCAAAATATCATCA < 41bp 0.460443304891654 0.825449064516915 0.38657463 0.485323 prediction 0.650898129033831 Functional Gain - TRIM24 ENSG00000122779 CDS Human protein_coding chr7:138235899 chr7:138235900 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_28393 0 0 1 0 2 Cytosol 0.438718592988016 0.438721666983126 0 0 hPsi_site_22117 iPseU_CNN:0;iRNA_PseU:0 22118 chr1 162741933 162741933 1 + G A STAD 162741932 + 162741912 162741952 41 GGCAACACATACTCAGTGCCTGCCGTCACCATGGACCTGCT GGCAACACATACTCAGTGCCTACCGTCACCATGGACCTGCT < 41bp 0.409652663419524 0.825448860470189 0.37851423 0.6284641 prediction 0.650897720940379 Functional Gain - DDR2 ENSG00000162733 CDS Human protein_coding chr1:162741932 chr1:162741933 nonsynonymous SNV 0.958 2 22 hPsi_associated_SNPs_28394 0 0 1 0 0 nucleolus 0.438717256473905 0.438764266798776 0.2569282 0 hPsi_site_22118 iPseU_CNN:0.2569282;iRNA_PseU:0 22119 chr15 91424883 91424883 1 + C A BLCA 91424882 + 91424862 91424902 41 GCCTGAGGTGGTGGCCGGCCTCAGCTGCGCCTTCATCGTGC GCCTGAGGTGGTGGCCGGCCTAAGCTGCGCCTTCATCGTGC < 41bp 0.47596289237162 0.825448797419378 0.32447296 0.50653195 prediction 0.650897594838757 Functional Gain - FURIN ENSG00000140564 CDS Human protein_coding chr15:91424882 chr15:91424883 synonymous SNV . 0 22 hPsi_associated_SNPs_28395 0 0 1 0 0 Ribosome 0.438774728460633 0.438771522968508 0.0130638999999999 0 hPsi_site_22119 iPseU_CNN:0.0130638999999999;iRNA_PseU:0 22120 chr16 69350163 69350163 1 + C A UCEC 69350162 + 69350142 69350182 41 GACAAGGCCAAGGAGAGCATTCGAGCCAAGTGCGTGCAGTA GACAAGGCCAAGGAGAGCATTAGAGCCAAGTGCGTGCAGTA < 41bp 0.542145010634782 0.867592537694617 0.393629 0.6365988 prediction 0.650895054119671 Functional Gain - VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69350162 chr16:69350163 synonymous SNV . 0 22 hPsi_associated_SNPs_28396 0 0 1 0 1 Cytosol 0.43904532464074 0.438718761398941 0.2731976 0 hPsi_site_22120 iPseU_CNN:0.2731976;iRNA_PseU:0 22121 chr1 152488146 152488146 1 + G A rs16834168 152488145 + 152488125 152488165 41 ACAACCGGAGCTCAGGATGCTGCTCCGGCTGCTGAGAGGCC ACAACCGGAGCTCAGGATGCTACTCCGGCTGCTGAGAGGCC < 41bp 0.563683972024403 0.889131052136048 0.28968954 0.5966708 prediction 0.65089416022329 Functional Gain - CRCT1 ENSG00000169509 CDS Human protein_coding chr1:152488145 chr1:152488146 nonsynonymous SNV 0.814 3 22 hPsi_associated_SNPs_28397 0 0 0 0 0 exosome 0.434593116311537 0.438706124110051 0.1933416 0 hPsi_site_22121 iPseU_CNN:0.1933416;iRNA_PseU:0 22122 chr14 93397669 93397669 1 + G A LUSC 93397668 + 93397648 93397688 41 AAGGAGGCAGAGAAAAGTGGTGAAGCCACAGACGGAGCCAG AAGGAGGCAGAGAAAAGTGGTAAAGCCACAGACGGAGCCAG < 41bp 0.576297976587787 0.901743786230008 0.354128 0.6941612 prediction 0.650891619284442 Functional Gain - CHGA ENSG00000100604 CDS Human protein_coding chr14:93397668 chr14:93397669 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_28398 0 0 0 1 1 exosome 0.438718596148959 0.438718625315255 0.3883224 0 hPsi_site_22122 iPseU_CNN:0.3883224;iRNA_PseU:0 22123 chr17 80320274 80320274 1 + G A SKCM 80320273 + 80320253 80320293 41 CCTCAGGGATGGAGCTGAGCTGGGGGCAGAGCCCAGGACAG CCTCAGGGATGGAGCTGAGCTAGGGGCAGAGCCCAGGACAG < 41bp 0.422766751776095 0.825439588946636 0.2831508 0.44487157 prediction 0.650879177893272 Functional Gain - TEX19 ENSG00000182459 CDS Human protein_coding chr17:80320273 chr17:80320274 stopgain 0.000 0 22 hPsi_associated_SNPs_28399 0 0 0 0 0 exosome 0.438718592995105 0.438718606220531 0 0 hPsi_site_22123 iPseU_CNN:0;iRNA_PseU:0 22124 chr2 71825746 71825746 1 + G A SKCM 71825745 + 71825725 71825765 41 GAGCCAGAAGACGGTGGTGGTGAAGAACACCCTTAACCCCA GAGCCAGAAGACGGTGGTGGTAAAGAACACCCTTAACCCCA < 41bp 0.544262457407134 0.869698439513567 0.26025087 0.6764712 prediction 0.650871964212866 Functional Gain - DYSF ENSG00000135636 CDS Human protein_coding chr2:71825745 chr2:71825746 synonymous SNV . 0 22 hPsi_associated_SNPs_28400 0 0 0 0 1 Nucleus 0.438718629310991 0.438718602275039 0.3529424 0 hPsi_site_22124 iPseU_CNN:0.3529424;iRNA_PseU:0 22125 chr11 94730975 94730975 1 + G A SKCM 94730974 + 94730954 94730994 41 ATCAGTGGCTCCTTGTTTGATGAAAACACTAAACAATGGAA ATCAGTGGCTCCTTGTTTGATAAAAACACTAAACAATGGAA < 41bp 0.424769785352605 0.825434329994338 0.2628801 0.33015585 prediction 0.650868659988676 Functional Gain - KDM4D ENSG00000186280 CDS Human protein_coding chr11:94730974 chr11:94730975 nonsynonymous SNV 0.048 0 22 hPsi_associated_SNPs_28401 0 0 0 0 0 chromatin 0.439329366320304 0.438717405813358 0 0 hPsi_site_22125 iPseU_CNN:0;iRNA_PseU:0 22126 chr2 108626936 108626936 1 + G A rs561099749 108626935 + 108626915 108626955 41 AACTGGAGGGGAGCCATATCTGTATCTTCAGCCCTTGATCT AACTGGAGGGGAGCCATATCTATATCTTCAGCCCTTGATCT < 41bp 0.42047144531575 0.82542925674095 0.25077534 0.3471101 prediction 0.650858513481899 Functional Gain - SLC5A7 ENSG00000115665 CDS Human protein_coding chr2:108626935 chr2:108626936 synonymous SNV . 0 22 hPsi_associated_SNPs_28402 0 0 0 0 0 unknown 0.438729314516131 0.438768391148668 0 0 hPsi_site_22126 iPseU_CNN:0;iRNA_PseU:0 22127 chr13 46108854 46108854 1 + G A rs2985989 46108853 + 46108833 46108873 41 TCAGCTGAGCCTTCTGCTGTTGGTTTCTAAATAAGCAGGCC TCAGCTGAGCCTTCTGCTGTTAGTTTCTAAATAAGCAGGCC < 41bp 0.424430381124057 0.825427429741405 0.24396443 0.28617054 prediction 0.65085485948281 Functional Gain - COG3 ENSG00000136152 CDS Human protein_coding chr13:46108853 chr13:46108854 synonymous SNV . 0 22 hPsi_associated_SNPs_28403 0 0 1 0 1 Nucleus 0.438718591246182 0.438718992360599 0 0 hPsi_site_22127 iPseU_CNN:0;iRNA_PseU:0 22128 chr3 183898974 183898974 1 + G A CESC 183898973 + 183898953 183898993 41 ATGAATGACAAGATTGTTATTGAAAAGCAGGGCAAAGGCAC ATGAATGACAAGATTGTTATTAAAAAGCAGGGCAAAGGCAC < 41bp 0.411956579010006 0.825427351809728 0.29565054 0.34563166 prediction 0.650854703619457 Functional Gain - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183898973 chr3:183898974 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28404 0 0 1 0 1 Ribosome 0.438817460801997 0.438722472040901 0 0 hPsi_site_22128 iPseU_CNN:0;iRNA_PseU:0 22129 chr11 60504467 60504467 1 + C A SARC 60504466 + 60504446 60504486 41 CGTAGTATATTGTATCTGGATCCCTCTCAGTATGGGCTGCA CGTAGTATATTGTATCTGGATACCTCTCAGTATGGGCTGCA < 41bp 0.5056421513118 0.831068713067887 0.2002871 0.35491073 prediction 0.650853123512174 Functional Gain - MS4A18 ENSG00000214782 CDS Human protein_coding chr11:60504466 chr11:60504467 nonsynonymous SNV 0.031 1 22 hPsi_associated_SNPs_28405 0 0 0 0 2 unknown 0.438745391872274 0.436357997439459 0 0 hPsi_site_22129 iPseU_CNN:0;iRNA_PseU:0 22130 chr5 140595759 140595759 1 + C A LUAD 140595758 + 140595738 140595778 41 CCAGGCCGACTTGCTCACCGTCTACCTGGTGGTGGCGTTGG CCAGGCCGACTTGCTCACCGTATACCTGGTGGTGGCGTTGG < 41bp 0.514512319521523 0.839936816172072 0.5094459 0.71359473 prediction 0.650848993301098 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595758 chr5:140595759 synonymous SNV . 0 22 hPsi_associated_SNPs_28406 0 0 0 0 0 exosome 0.438728241905448 0.438715955347023 0.40829766 0 hPsi_site_22130 iPseU_CNN:0.40829766;iRNA_PseU:0 22131 chr3 93783344 93783344 1 + G A LUSC 93783343 + 93783323 93783363 41 AAAGTTGTGTTGGATCATTTTGAAAAACAGTATTCCAAAGA AAAGTTGTGTTGGATCATTTTAAAAAACAGTATTCCAAAGA < 41bp 0.418463081479458 0.825424063521794 0.34927773 0.72611594 prediction 0.650848127043587 Functional Gain - NSUN3 ENSG00000178694 CDS Human protein_coding chr3:93783343 chr3:93783344 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28407 0 0 1 0 2 chromatin 0.440199003985099 0.439499495501211 0.45223188 0 hPsi_site_22131 iPseU_CNN:0.45223188;iRNA_PseU:0 22132 chr17 28849286 28849286 1 + G T CESC 28849285 + 28849265 28849305 41 CCCAAAGATCGTTTTCCTGCTGTAAACAGCCTGATCCAGAG CCCAAAGATCGTTTTCCTGCTTTAAACAGCCTGATCCAGAG < 41bp 0.500383359172745 0.825807316689709 0.28172818 0.4512654 prediction 0.650847915033928 Functional Gain - GOSR1 ENSG00000108587 CDS Human protein_coding chr17:28849285 chr17:28849286 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28408 0 0 1 0 1 Ribosome 0.438718590003361 0.43871853703295 0 0 hPsi_site_22132 iPseU_CNN:0;iRNA_PseU:0 22133 chr17 3100888 3100888 1 + G A UCEC 3100887 + 3100867 3100907 41 AGTCAGCAAGAACAGAATAATGTCTTCTTTGTGATTTTTTT AGTCAGCAAGAACAGAATAATATCTTCTTTGTGATTTTTTT < 41bp 0.541076753513472 0.866496210045519 0.24774551 0.29647058 prediction 0.650838913064095 Functional Gain - OR1A2 ENSG00000172150 CDS Human protein_coding chr17:3100887 chr17:3100888 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_28409 0 0 0 0 0 exosome 0.438490527879916 0.438623965981692 0 0 hPsi_site_22133 iPseU_CNN:0;iRNA_PseU:0 22134 chr19 53762548 53762548 1 + C A UCEC 53762547 + 53762527 53762567 41 GGAACAATCTCTACCCCAACTCTTCTCCTGGGAACAGAGCC GGAACAATCTCTACCCCAACTATTCTCCTGGGAACAGAGCC < 41bp 0.514860859446041 0.840276489193918 0.26273203 0.41965693 prediction 0.650831259495755 Functional Gain - VN1R2 ENSG00000196131 CDS Human protein_coding chr19:53762547 chr19:53762548 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_28410 0 0 0 0 0 unknown 0.438717477102464 0.437635847840523 0 0 hPsi_site_22134 iPseU_CNN:0;iRNA_PseU:0 22135 chr17 45821665 45821665 1 + C A GBM 45821664 + 45821644 45821684 41 CAACGCTTCCAACACGCATATCTTTACTTTCCAAGAAACCC CAACGCTTCCAACACGCATATATTTACTTTCCAAGAAACCC < 41bp 0.546438341044023 0.87184690745778 0.23006612 0.2734558 prediction 0.650817132827513 Functional Gain - TBX21 ENSG00000073861 CDS Human protein_coding chr17:45821664 chr17:45821665 synonymous SNV . 0 22 hPsi_associated_SNPs_28411 0 0 0 0 1 exosome 0.439402625219596 0.438386710863726 0 0 hPsi_site_22135 iPseU_CNN:0;iRNA_PseU:0 22136 chr1 32502597 32502597 1 + G T LUSC 32502596 + 32502576 32502616 41 ACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAG ACCCTCTCGTGGACGTGGGGTTCCAGTGAGAGGCCGGGGAG < 41bp 0.515435610836089 0.840842843132485 0.15288845 0.23249328 prediction 0.650814464592791 Functional Gain - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502596 chr1:32502597 synonymous SNV . 0 22 hPsi_associated_SNPs_28412 0 0 1 0 2 Nucleus 0.438776937945789 0.438614311989656 0 0 hPsi_site_22136 iPseU_CNN:0;iRNA_PseU:0 22137 chr21 45389079 45389079 1 + C A UCEC 45389078 + 45389058 45389098 41 GTACTTTCTGGAGATTGTGTTCTGCAAGCGGAAGTGGGAGG GTACTTTCTGGAGATTGTGTTATGCAAGCGGAAGTGGGAGG < 41bp 0.544858983124647 0.870264341678218 0.24398503 0.357257 prediction 0.650810717107141 Functional Gain - AGPAT3 ENSG00000160216 CDS Human protein_coding chr21:45389078 chr21:45389079 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28413 0 0 1 0 2 Endoplasmic reticulum 0.438718622332335 0.438832237383495 0 0 hPsi_site_22137 iPseU_CNN:0;iRNA_PseU:0 22138 chr19 7913980 7913980 1 + C A COAD 7913979 + 7913959 7913999 41 CACCTACCCGGAACATGAGTTCTTCAAGGGCCAGGACAGCC CACCTACCCGGAACATGAGTTATTCAAGGGCCAGGACAGCC < 41bp 0.453577319239981 0.825399180529842 0.42538726 0.8439723 prediction 0.650798361059684 Functional Gain - EVI5L ENSG00000142459 CDS Human protein_coding chr19:7913979 chr19:7913980 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_28414 0 0 0 0 1 Ribosome 0.438718592989708 0.438718592986029 0.6879446 0 hPsi_site_22138 iPseU_CNN:0.6879446;iRNA_PseU:0 22139 chr14 86088676 86088676 1 + C A BLCA 86088675 + 86088655 86088695 41 ACATTCCTTTGACAGCCTTCTCAAATCTGCGTAAGCTGGAA ACATTCCTTTGACAGCCTTCTAAAATCTGCGTAAGCTGGAA < 41bp 0.469815783683801 0.825393176923569 0.23566398 0.27636606 prediction 0.650786353847137 Functional Gain - FLRT2 ENSG00000185070 CDS Human protein_coding chr14:86088675 chr14:86088676 stopgain 0.816 1 22 hPsi_associated_SNPs_28415 0 0 0 0 0 Ribosome 0.43876816947789 0.438748237508752 0 0 hPsi_site_22139 iPseU_CNN:0;iRNA_PseU:0 22140 chr1 70897792 70897792 1 + G T LIHC 70897791 + 70897771 70897811 41 GGAGCAGTTCCATCTCCTATTGATTGTTACCTCTGCAATCG GGAGCAGTTCCATCTCCTATTTATTGTTACCTCTGCAATCG < 41bp 0.511659203068605 0.837052033302338 0.17897558 0.25649628 prediction 0.650785660467466 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70897791 chr1:70897792 nonsynonymous SNV 0.804 5 22 hPsi_associated_SNPs_28416 0 0 1 0 1 Cytosol 0.438459103747046 0.438151562082561 0 0 hPsi_site_22140 iPseU_CNN:0;iRNA_PseU:0 22141 chr19 35517324 35517324 1 + G A rs565861486 35517323 + 35517303 35517343 41 TCCCTCAGCTCTGGGTTTAATGTATTATATTTATTTGGGGC TCCCTCAGCTCTGGGTTTAATATATTATATTTATTTGGGGC < 41bp 0.495103745177553 0.825388161080881 0.24322158 0.24846539 prediction 0.650776322161761 Functional Gain - GRAMD1A ENSG00000089351 UTR3 Human protein_coding chr19:35517323 chr19:35517324 . . 0 22 hPsi_associated_SNPs_28417 0 0 1 3 0 Endoplasmic reticulum 0.438718592974873 0.438718592994998 0 0 hPsi_site_22141 iPseU_CNN:0;iRNA_PseU:0 22142 chr12 54943725 54943725 1 + G A UCEC 54943724 + 54943704 54943744 41 TTGCCCGTCACCCCTGGAGCTGAAGTCAGCCCCCAGCAAGA TTGCCCGTCACCCCTGGAGCTAAAGTCAGCCCCCAGCAAGA < 41bp 0.546284008567655 0.87167183134107 0.25099128 0.42789575 prediction 0.65077564554683 Functional Gain - PDE1B ENSG00000123360 CDS Human protein_coding chr12:54943724 chr12:54943725 synonymous SNV . 0 22 hPsi_associated_SNPs_28418 0 0 0 0 2 exosome 0.438718630295103 0.438720295681976 0 0 hPsi_site_22142 iPseU_CNN:0;iRNA_PseU:0 22143 chr1 197874983 197874983 1 + G A COAD 197874982 + 197874962 197875002 41 TATGTGGTGCTCACACAGATTGCCCACTTGCAAAGAGGTGA TATGTGGTGCTCACACAGATTACCCACTTGCAAAGAGGTGA < 41bp 0.435811276858633 0.825383825894857 0.13576749 0.26723015 prediction 0.650767651789715 Functional Gain - C1orf53 ENSG00000203724 CDS Human protein_coding chr1:197874982 chr1:197874983 nonsynonymous SNV 0.577 2 22 hPsi_associated_SNPs_28419 0 0 1 0 2 exosome 0.438424927909582 0.438658583845794 0 0 hPsi_site_22143 iPseU_CNN:0;iRNA_PseU:0 22144 chr16 53504446 53504446 1 + G T LUSC 53504445 + 53504425 53504465 41 ACAGGTGACAGGAACAACTTTGCAAGTCCCTGGTCAAGTGG ACAGGTGACAGGAACAACTTTTCAAGTCCCTGGTCAAGTGG < 41bp 0.508865706594374 0.834249375543079 0.61495084 0.83530056 prediction 0.65076733789741 Functional Gain - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504445 chr16:53504446 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_28420 0 0 1 0 0 Ribosome 0.438717444902151 0.43871858599254 0.44069944 0 hPsi_site_22144 iPseU_CNN:0.44069944;iRNA_PseU:0 22145 chr11 55606961 55606961 1 + C A LUAD 55606960 + 55606940 55606980 41 AAGTCTTCTCCACCTGTGCCTCCCACCTGACTGCCATCACC AAGTCTTCTCCACCTGTGCCTACCACCTGACTGCCATCACC < 41bp 0.479788464752278 0.825382120067884 0.1568298 0.33513588 prediction 0.650764240135768 Functional Gain - OR5D16 ENSG00000205029 CDS Human protein_coding chr11:55606960 chr11:55606961 nonsynonymous SNV 0.458 3 22 hPsi_associated_SNPs_28421 0 0 0 0 0 unknown 0.438670209493877 0.438272851447731 0 0 hPsi_site_22145 iPseU_CNN:0;iRNA_PseU:0 22146 chrX 83128931 83128931 1 + C A UCEC 83128930 + 83128910 83128950 41 GGATGCAAAGAAAATTACATTCTCTACTGATTCTGAATCTG GGATGCAAAGAAAATTACATTATCTACTGATTCTGAATCTG < 41bp 0.522932579163927 0.848308768538032 0.3004206 0.2390219 prediction 0.650752378748209 Functional Gain - CYLC1 ENSG00000183035 CDS Human protein_coding chrX:83128930 chrX:83128931 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_28422 0 0 0 0 0 unknown 0.439549212187901 0.438919077041759 0 0 hPsi_site_22146 iPseU_CNN:0;iRNA_PseU:0 22147 chr17 16285230 16285230 1 + C A GBM 16285229 + 16285209 16285249 41 AAACTAGGTCAAAATGCAGATCTTCGTGAAAACCCTTACCG AAACTAGGTCAAAATGCAGATATTCGTGAAAACCCTTACCG < 41bp 0.475289258559424 0.825376131387191 0.77977675 0.8934107 prediction 0.650752262774382 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285229 chr17:16285230 synonymous SNV . 0 22 hPsi_associated_SNPs_28423 0 0 1 0 1 Ribosome 0.437985012541345 0.438516014755858 0.2272679 0 hPsi_site_22147 iPseU_CNN:0.2272679;iRNA_PseU:0 22148 chr12 53342931 53342931 1 + C A GBM 53342930 + 53342910 53342950 41 CGTCGTCCGCAAAGCCTGAGTCCTGTCCTTTCTCTCTCCCC CGTCGTCCGCAAAGCCTGAGTACTGTCCTTTCTCTCTCCCC < 41bp 0.489909792793227 0.825373828166737 0.29291362 0.8052856 prediction 0.650747656333474 Functional Gain - KRT18 ENSG00000111057 UTR5 Human protein_coding chr12:53342930 chr12:53342931 . . 0 22 hPsi_associated_SNPs_28424 0 0 1 0 0 Cytosol 0.438718813334957 0.438774086973343 0.6105712 0 hPsi_site_22148 iPseU_CNN:0.6105712;iRNA_PseU:0 22149 chr1 32794755 32794755 1 + C A rs570282927 32794754 + 32794734 32794774 41 CGAGTCCTATGAGGCCATTTTCAAGCCGGTAAGTGGCTTTA CGAGTCCTATGAGGCCATTTTAAAGCCGGTAAGTGGCTTTA < 41bp 0.516744291066809 0.842116882856279 0.31115597 0.3171528 prediction 0.650745183578941 Functional Gain - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32794754 chr1:32794755 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28425 0 0 1 0 2 Cytosol 0.438724026769834 0.438718855605323 0 0 hPsi_site_22149 iPseU_CNN:0;iRNA_PseU:0 22150 chr17 73489924 73489924 1 + C A GBM 73489923 + 73489903 73489943 41 GGTGCCCGGCCAAAGCAGCATCTTCACCATGTGCGAGCTGC GGTGCCCGGCCAAAGCAGCATATTCACCATGTGCGAGCTGC < 41bp 0.463151959248555 0.825370926114623 0.3058346 0.6210086 prediction 0.650741852229247 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73489923 chr17:73489924 synonymous SNV . 0 22 hPsi_associated_SNPs_28426 0 0 0 0 1 Cytosol 0.438727409493786 0.438362739357615 0.2420172 0 hPsi_site_22150 iPseU_CNN:0.2420172;iRNA_PseU:0 22151 chr14 76488726 76488726 1 + G A SKCM 76488725 + 76488705 76488745 41 AGGCTGGGCAGGTGATTCCGTGAAGGCTTCGAAGTGAGTAC AGGCTGGGCAGGTGATTCCGTAAAGGCTTCGAAGTGAGTAC < 41bp 0.409166900129464 0.825370000174837 0.27149653 0.3269914 prediction 0.650740000349674 Functional Gain - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76488725 chr14:76488726 synonymous SNV . 0 22 hPsi_associated_SNPs_28427 0 0 1 0 2 Ribosome 0.438717488212238 0.438718614098858 0 0 hPsi_site_22151 iPseU_CNN:0;iRNA_PseU:0 22152 chr15 100340139 100340139 1 + G A PRAD 100340138 + 100340118 100340158 41 CTCCGAGAAGATGAACTCCTTGGTCTGCCTGCTCTGCCGAC CTCCGAGAAGATGAACTCCTTAGTCTGCCTGCTCTGCCGAC < 41bp 0.530135223821309 0.855502863248527 0.40405327 0.62508756 prediction 0.650735278854436 Functional Gain - DNM1P46 ENSG00000182397 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:100340138 chr15:100340139 . . 0 22 hPsi_associated_SNPs_28428 0 0 0 0 0 unknown 0.438725723516357 0.438718561326964 0.25017512 0 hPsi_site_22152 iPseU_CNN:0.25017512;iRNA_PseU:0 22153 chr15 43644044 43644044 1 + G A UCEC 43644043 + 43644023 43644063 41 CCAGTCTCAGGTGTGGGATCTGTCTTATGAATCCATCAACT CCAGTCTCAGGTGTGGGATCTATCTTATGAATCCATCAACT < 41bp 0.427028694582829 0.82536652376333 0.39540508 0.5847157 prediction 0.65073304752666 Functional Gain - ADAL ENSG00000168803 CDS Human protein_coding chr15:43644043 chr15:43644044 synonymous SNV . 0 22 hPsi_associated_SNPs_28429 0 0 1 0 1 chromatin 0.438705777146395 0.438683766560201 0.1694314 0 hPsi_site_22153 iPseU_CNN:0.1694314;iRNA_PseU:0 22154 chr12 8197460 8197460 1 + C A BLCA 8197459 + 8197439 8197479 41 CACCAACCATGACTTTAAATTCTCCTACTCAGAGATCAACT CACCAACCATGACTTTAAATTATCCTACTCAGAGATCAACT < 41bp 0.540691062403787 0.866057514980606 0.28194198 0.31356782 prediction 0.650732905153637 Functional Gain - FOXJ2 ENSG00000065970 CDS Human protein_coding chr12:8197459 chr12:8197460 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_28430 0 0 0 0 1 nucleoplasm 0.438718592648659 0.438718598976999 0 0 hPsi_site_22154 iPseU_CNN:0;iRNA_PseU:0 22155 chr7 120979382 120979382 1 + G A STAD 120979381 + 120979361 120979401 41 AGGTGTGAAAGCATGACTGATGTCCACACTTGCAAGTAACC AGGTGTGAAAGCATGACTGATATCCACACTTGCAAGTAACC < 41bp 0.427785593249447 0.825365355949287 0.5827534 0.72412163 prediction 0.650730711898574 Functional Gain - WNT16 ENSG00000002745 CDS Human protein_coding chr7:120979381 chr7:120979382 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28431 0 0 0 0 0 exosome 0.438724358729074 0.438744420043979 0.28273646 0 hPsi_site_22155 iPseU_CNN:0.28273646;iRNA_PseU:0 22156 chr7 86416186 86416186 1 + C A COAD 86416185 + 86416165 86416205 41 GACTTCTGGGAGCAAAAGTTTCAGTGCAGCCTCCAGAACAA GACTTCTGGGAGCAAAAGTTTAAGTGCAGCCTCCAGAACAA < 41bp 0.546544441908598 0.871908245926573 0.66423404 0.85482657 prediction 0.65072760803595 Functional Gain - GRM3 ENSG00000198822 CDS Human protein_coding chr7:86416185 chr7:86416186 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28432 0 0 0 0 0 Endoplasmic reticulum 0.438544245538159 0.438624831722679 0.38118506 0 hPsi_site_22156 iPseU_CNN:0.38118506;iRNA_PseU:0 22157 chr8 10557840 10557840 1 + G A SKCM 10557839 + 10557819 10557859 41 CCAGAACACATTCGCCATCTTGGACCTGAAGCTTCAGAAGA CCAGAACACATTCGCCATCTTAGACCTGAAGCTTCAGAAGA < 41bp 0.413835953368171 0.825363133752745 0.16870022 0.26716256 prediction 0.65072626750549 Functional Gain - C8orf74 ENSG00000171060 CDS Human protein_coding chr8:10557839 chr8:10557840 synonymous SNV . 0 22 hPsi_associated_SNPs_28433 0 0 0 0 1 unknown 0.438718592866153 0.438722234900528 0 0 hPsi_site_22157 iPseU_CNN:0;iRNA_PseU:0 22158 chr9 120476587 120476587 1 + C A LUAD 120476586 + 120476566 120476606 41 CAACATCATCCATGAAGGTTTCCATAAAAGCCGAAAGGTGA CAACATCATCCATGAAGGTTTACATAAAAGCCGAAAGGTGA < 41bp 0.526127162242196 0.851489925803297 0.37097663 0.66435915 prediction 0.650725527122201 Functional Gain - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120476586 chr9:120476587 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_28434 0 0 0 0 0 cytosol 0.43955589854214 0.440242905298457 0.3287183 0 hPsi_site_22158 iPseU_CNN:0.3287183;iRNA_PseU:0 22159 chr1 43783022 43783022 1 + C A COAD 43783021 + 43783001 43783041 41 GGGGAACTTCGGCCAGGTCATCCGGGCCATGATCAAGAAGG GGGGAACTTCGGCCAGGTCATACGGGCCATGATCAAGAAGG < 41bp 0.465733244143322 0.825362687860802 0.15207037 0.3055117 prediction 0.650725375721603 Functional Gain - TIE1 ENSG00000066056 CDS Human protein_coding chr1:43783021 chr1:43783022 synonymous SNV . 0 22 hPsi_associated_SNPs_28435 0 0 0 0 1 Cytosol 0.438718593004244 0.438718308983646 0 0 hPsi_site_22159 iPseU_CNN:0;iRNA_PseU:0 22160 chr4 39462513 39462513 1 + C A BLCA 39462512 + 39462492 39462532 41 CAGACCTTCAAGATTTTGTATCTGGTGATCTTGCAGACAGG CAGACCTTCAAGATTTTGTATATGGTGATCTTGCAGACAGG < 41bp 0.468877046422451 0.825359097104528 0.40601093 0.4953257 prediction 0.650718194209056 Functional Gain - LIAS ENSG00000121897 CDS Human protein_coding chr4:39462512 chr4:39462513 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_28436 0 0 1 0 1 Ribosome 0.439376853824661 0.43871883139722 0 0 hPsi_site_22160 iPseU_CNN:0;iRNA_PseU:0 22161 chrX 55028739 55028739 1 + G A BLCA 55028738 + 55028718 55028758 41 AGTGGCTGCTGAAGAAGGCCTGAGTGGCCTGTTTGCCACCC AGTGGCTGCTGAAGAAGGCCTAAGTGGCCTGTTTGCCACCC < 41bp 0.412875480568158 0.825358685743908 0.25399145 0.3031377 prediction 0.650717371487817 Functional Gain - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55028738 chrX:55028739 synonymous SNV . 0 22 hPsi_associated_SNPs_28437 0 0 0 0 1 Ribosome 0.438707357184729 0.438718603492031 0 0 hPsi_site_22161 iPseU_CNN:0;iRNA_PseU:0 22162 chr3 196387622 196387622 1 + C A LUSC 196387621 + 196387601 196387641 41 TGCCTGATGACGCTTCACATTCGGGAGCACGAGCCCCCCGG TGCCTGATGACGCTTCACATTAGGGAGCACGAGCCCCCCGG < 41bp 0.545090101275338 0.870446444605904 0.3018567 0.41515756 prediction 0.650712686661132 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196387621 chr3:196387622 synonymous SNV . 0 22 hPsi_associated_SNPs_28438 0 0 0 0 0 chromatin 0.438734460628832 0.438716183814682 0 0 hPsi_site_22162 iPseU_CNN:0;iRNA_PseU:0 22163 chr19 40715032 40715032 1 + C A UCEC 40715031 + 40715011 40715051 41 CTTTGAGCATAAGATCACAGTCCAGGCCTCTCCAACTCTGG CTTTGAGCATAAGATCACAGTACAGGCCTCTCCAACTCTGG < 41bp 0.53531054848996 0.860666151236738 0.2476753 0.5128064 prediction 0.650711205493556 Functional Gain - MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40715031 chr19:40715032 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28439 0 0 0 0 2 Endoplasmic reticulum 0.438718596951093 0.438729107487674 0.0256128 0 hPsi_site_22163 iPseU_CNN:0.0256128;iRNA_PseU:0 Bipolar disorder 22164 chr7 142563841 142563841 1 + G A CESC 142563840 + 142563820 142563860 41 TCAATGTCGTGTGCAAGGAGTGTGAAGGCCGCCAGGAACCT TCAATGTCGTGTGCAAGGAGTATGAAGGCCGCCAGGAACCT < 41bp 0.580888827482153 0.906237221416466 0.38662755 0.50165325 prediction 0.650696787868626 Functional Gain - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142563840 chr7:142563841 nonsynonymous SNV 0.606 3 22 hPsi_associated_SNPs_28440 0 0 0 0 0 Endoplasmic reticulum 0.438725504018434 0.438719315994295 0.0033065000000001 0 hPsi_site_22164 iPseU_CNN:0.0033065000000001;iRNA_PseU:0 22165 chr19 50097787 50097787 1 + C A CESC 50097786 + 50097766 50097806 41 CGCCTCCGTCATGAACCTTATCTCGGCCCTGGAATCCCGGG CGCCTCCGTCATGAACCTTATATCGGCCCTGGAATCCCGGG < 41bp 0.531569130934601 0.856916756036524 0.64591503 0.7004096 prediction 0.650695250203845 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50097786 chr19:50097787 synonymous SNV . 0 22 hPsi_associated_SNPs_28441 0 0 1 0 2 Exosome 0.438718593025006 0.43871917943847 0.10898914 0 hPsi_site_22165 iPseU_CNN:0.10898914;iRNA_PseU:0 22166 chr1 100613741 100613741 1 + G A STAD 100613740 + 100613720 100613760 41 ATTTCCAGCGAATGAGTAGTTGGGCAACTTGTGGGATGCGG ATTTCCAGCGAATGAGTAGTTAGGCAACTTGTGGGATGCGG < 41bp 0.432510076803373 0.825341732367838 0.26905566 0.3002959 prediction 0.650683464735677 Functional Gain - TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100613740 chr1:100613741 stopgain 1.000 1 22 hPsi_associated_SNPs_28442 0 0 1 1 1 chromatin 0.438704585901583 0.438718591709929 0 0 hPsi_site_22166 iPseU_CNN:0;iRNA_PseU:0 22167 chr1 197896833 197896833 1 + G A STAD 197896832 + 197896812 197896852 41 GCATCACCAGCTCCGGACCATGAAATCCTACTTTGCCATCA GCATCACCAGCTCCGGACCATAAAATCCTACTTTGCCATCA < 41bp 0.436719705055058 0.825339282857386 0.20095676 0.22224066 prediction 0.650678565714772 Functional Gain - LHX9 ENSG00000143355 CDS Human protein_coding chr1:197896832 chr1:197896833 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28443 0 0 0 0 1 exosome 0.438755157130167 0.438718567962324 0 0 hPsi_site_22167 iPseU_CNN:0;iRNA_PseU:0 22168 chr11 67160187 67160187 1 + C A GBM 67160186 + 67160166 67160206 41 CTGCTTTCTCTTTGCCCCGCTCTTCTTCCAGCAATACCAGG CTGCTTTCTCTTTGCCCCGCTATTCTTCCAGCAATACCAGG < 41bp 0.54176023023797 0.867087638857175 0.25055394 0.30496228 prediction 0.650654817238408 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160186 chr11:67160187 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28444 0 0 1 0 2 nucleus 0.438718501126341 0.438718169663339 0 0 hPsi_site_22168 iPseU_CNN:0;iRNA_PseU:0 22169 chr16 28601721 28601721 1 + G A UCEC 28601720 + 28601700 28601740 41 CCGTGGATGGGGACGAGCAGTGGATCCTGGCCGAGGTGGTC CCGTGGATGGGGACGAGCAGTAGATCCTGGCCGAGGTGGTC < 41bp 0.40103953838412 0.825325930546346 0.24902922 0.4403392 prediction 0.650651861092691 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28601720 chr16:28601721 stopgain 0.981 1 22 hPsi_associated_SNPs_28445 0 0 0 0 1 chromatin 0.438719854237353 0.438728757058364 0 0 hPsi_site_22169 iPseU_CNN:0;iRNA_PseU:0 22170 chr18 33234701 33234701 1 + G A OV 33234700 + 33234680 33234720 41 ACTCTTGGATATGTTCCTGCTGCTTTACTTCAGTGAATGCA ACTCTTGGATATGTTCCTGCTACTTTACTTCAGTGAATGCA < 41bp 0.448458858844623 0.825320195289683 0.17645392 0.32193744 prediction 0.650640390579366 Functional Gain - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33234700 chr18:33234701 synonymous SNV . 0 22 hPsi_associated_SNPs_28446 0 0 1 0 2 Endoplasmic reticulum 0.438786202512934 0.438722974146599 0 0 hPsi_site_22170 iPseU_CNN:0;iRNA_PseU:0 22171 chr4 123542087 123542087 1 + G A SKCM 123542086 + 123542066 123542106 41 CGATCTTGACCTTGGGAGCTTGATTTGTGGACCAGTGTCCC CGATCTTGACCTTGGGAGCTTAATTTGTGGACCAGTGTCCC < 41bp 0.446265257109164 0.825315217722739 0.30415756 0.33264607 prediction 0.650630435445477 Functional Gain - IL21 ENSG00000138684 CDS Human protein_coding chr4:123542086 chr4:123542087 nonsynonymous SNV 0.925 1 22 hPsi_associated_SNPs_28447 0 0 0 0 1 exosome 0.438715663104883 0.438715718492066 0 0 hPsi_site_22171 iPseU_CNN:0;iRNA_PseU:0 22172 chr11 55111427 55111427 1 + C A LUAD 55111426 + 55111406 55111446 41 GTGGTTGCCCTCGTTTTTGTTCCCTGTATTTTTATGTATGT GTGGTTGCCCTCGTTTTTGTTACCTGTATTTTTATGTATGT < 41bp 0.516246113965424 0.841559878811143 0.16459066 0.26221657 prediction 0.650627529691438 Functional Gain - OR4A16 ENSG00000181961 CDS Human protein_coding chr11:55111426 chr11:55111427 nonsynonymous SNV 0.839 3 22 hPsi_associated_SNPs_28448 0 0 0 0 0 unknown 0.438723933454441 0.438718293517202 0 0 hPsi_site_22172 iPseU_CNN:0;iRNA_PseU:0 22173 chr10 14939269 14939269 1 + G A UCEC 14939268 + 14939248 14939288 41 CAGATTGCTTCTTTCAAAAATGTTGTCCTGCTGAAGCTGGA CAGATTGCTTCTTTCAAAAATATTGTCCTGCTGAAGCTGGA < 41bp 0.419924952433885 0.825307311484353 0.2688079 0.2745071 prediction 0.650614622968706 Functional Gain - SUV39H2 ENSG00000152455 CDS Human protein_coding chr10:14939268 chr10:14939269 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28449 0 0 1 0 0 Cytosol 0.436970649427997 0.438361775892906 0 0 hPsi_site_22173 iPseU_CNN:0;iRNA_PseU:0 22174 chr12 50869400 50869400 1 + C A LUAD 50869399 + 50869379 50869419 41 AGCCACTACGGGAACTTCGCTCCAATGTGGTGTCTCCCACC AGCCACTACGGGAACTTCGCTACAATGTGGTGTCTCCCACC < 41bp 0.516825238091128 0.84212682359658 0.6848866 0.6365679 prediction 0.650603171010903 Functional Gain - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50869399 chr12:50869400 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_28450 0 0 1 0 1 Nucleus 0.438718592952879 0.438744245420895 0 0 hPsi_site_22174 iPseU_CNN:0;iRNA_PseU:0 22175 chr16 69148790 69148790 1 + G A UCEC 69148789 + 69148769 69148809 41 TTATCAAGGCCACCTACGCCTGCTTCCTTCGGGGCAATGCA TTATCAAGGCCACCTACGCCTACTTCCTTCGGGGCAATGCA < 41bp 0.574979975570724 0.900275792592 0.26562965 0.38524374 prediction 0.650591634042553 Functional Gain - HAS3 ENSG00000103044 CDS Human protein_coding chr16:69148789 chr16:69148790 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28451 0 0 0 0 0 nucleus 0.438718739699533 0.438720398318568 0 0 hPsi_site_22175 iPseU_CNN:0;iRNA_PseU:0 22176 chr2 204281674 204281674 1 + C A UCEC 204281673 + 204281653 204281693 41 GCCACCTGTGGAAGAACCAGTCTTTGATGAGTCTCCCCCAC GCCACCTGTGGAAGAACCAGTATTTGATGAGTCTCCCCCAC < 41bp 0.458245221945741 0.825293541040408 0.37873048 0.60690856 prediction 0.650587082080816 Functional Gain - ABI2 ENSG00000138443 CDS Human protein_coding chr2:204281673 chr2:204281674 synonymous SNV . 0 22 hPsi_associated_SNPs_28452 0 0 1 0 2 Cytosol 0.438718916315799 0.438417543555906 0.21381712 0 hPsi_site_22176 iPseU_CNN:0.21381712;iRNA_PseU:0 22177 chr8 73480362 73480362 1 + C A UCEC 73480361 + 73480341 73480381 41 TTACTGGGGGATTGATGAGATCTACTTGGAGTCCTGCTGCC TTACTGGGGGATTGATGAGATATACTTGGAGTCCTGCTGCC < 41bp 0.526294834481869 0.851587401504073 0.6905568 0.6628186 prediction 0.650585134044407 Functional Gain - KCNB2 ENSG00000182674 CDS Human protein_coding chr8:73480361 chr8:73480362 synonymous SNV . 0 22 hPsi_associated_SNPs_28453 0 0 0 0 0 exosome 0.438718589302074 0.438718619079849 0 0 hPsi_site_22177 iPseU_CNN:0;iRNA_PseU:0 22178 chr17 77043891 77043891 1 + G T LUSC 77043890 + 77043870 77043910 41 CGGCAAGTTCTACTGCTACGTGCCCGGCCTCTACTTCTTCA CGGCAAGTTCTACTGCTACGTTCCCGGCCTCTACTTCTTCA < 41bp 0.496608820654723 0.825291459495718 0.14904973 0.30174983 prediction 0.650582918991435 Functional Gain - C1QTNF1 ENSG00000173918 CDS Human protein_coding chr17:77043890 chr17:77043891 synonymous SNV . 0 22 hPsi_associated_SNPs_28454 0 0 0 0 0 exosome 0.438718595648243 0.438718593892152 0 0 hPsi_site_22178 iPseU_CNN:0;iRNA_PseU:0 22179 chr1 248651988 248651988 1 + G A BLCA 248651987 + 248651967 248652007 41 ACATCCAGCTCTACTTAGTGTGGTCATCTTTGTGGTTTTCC ACATCCAGCTCTACTTAGTGTAGTCATCTTTGTGGTTTTCC < 41bp 0.552119045703425 0.877410299918193 0.34848207 0.71198976 prediction 0.650582508429536 Functional Gain - OR2T5 ENSG00000203661 CDS Human protein_coding chr1:248651987 chr1:248651988 synonymous SNV . 0 22 hPsi_associated_SNPs_28455 0 0 0 0 0 exosome 0.438718592995101 0.438718729476596 0.42397952 0 hPsi_site_22179 iPseU_CNN:0.42397952;iRNA_PseU:0 22180 chr9 84532106 84532106 1 + C T BLCA 84532107 - 84532087 84532127 41 CAGGCCCCATCTGCGCTGGATGAGCCTCTTTCGAATGTGTT CAGGCCCCATCTGCGCTGGATAAGCCTCTTTCGAATGTGTT < 41bp 0.50815973558855 0.833447732209858 0.19840845 0.4991889 prediction 0.650575993242616 Functional Gain - SPATA31D5P ENSG00000240632 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr9:84532107 chr9:84532106 . . 0 22 hPsi_associated_SNPs_28456 0 0 0 0 0 unknown 0.438718591994869 0.438718589216506 0 0 hPsi_site_22180 iPseU_CNN:0;iRNA_PseU:0 22181 chr10 135038376 135038376 1 + G A LUAD 135038375 + 135038355 135038395 41 TCAGGACAAGCTACGGAGGATGAAGGCTACATTCCAGTAGC TCAGGACAAGCTACGGAGGATAAAGGCTACATTCCAGTAGC < 41bp 0.433994561971839 0.825285300210676 0.6885191 0.9294653 prediction 0.650570600421352 Functional Gain - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135038375 chr10:135038376 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_28457 0 0 0 0 0 Endoplasmic reticulum 0.438718771209089 0.438718809325458 0.4818924 0 hPsi_site_22181 iPseU_CNN:0.4818924;iRNA_PseU:0 22182 chr1 152882375 152882375 1 + G A SKCM 152882374 + 152882354 152882394 41 CAATACCCATCAGGAGCAAATGAAACAGCCAACTCCACTGC CAATACCCATCAGGAGCAAATAAAACAGCCAACTCCACTGC < 41bp 0.423865561501002 0.82527943155143 0.3156622 0.3581378 prediction 0.650558863102859 Functional Gain - IVL ENSG00000163207 CDS Human protein_coding chr1:152882374 chr1:152882375 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28458 0 0 0 0 0 unknown 0.439143701401929 0.438493443401462 0 0 hPsi_site_22182 iPseU_CNN:0;iRNA_PseU:0 22183 chrX 44703791 44703791 1 + C A LUSC 44703790 + 44703770 44703810 41 ACGCCCATACATGGACCAAGTCGCGCCGCCCCATCATCCGG ACGCCCATACATGGACCAAGTAGCGCCGCCCCATCATCCGG < 41bp 0.538400011552805 0.863677112853863 0.15340433 0.32517624 prediction 0.650554202602115 Functional Gain - DUSP21 ENSG00000189037 CDS Human protein_coding chrX:44703790 chrX:44703791 stopgain 0.211 0 22 hPsi_associated_SNPs_28459 0 0 0 0 0 exosome 0.438729644592601 0.431958653805313 0 0 hPsi_site_22183 iPseU_CNN:0;iRNA_PseU:0 22184 chr12 109523518 109523518 1 + G A SKCM 109523517 + 109523497 109523537 41 ATGGCAGTTGTCGTCCACCATGGAGACATGCACTCTGGACA ATGGCAGTTGTCGTCCACCATAGAGACATGCACTCTGGACA < 41bp 0.420323590405078 0.82527208611727 0.17442325 0.24709609 prediction 0.650544172234541 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109523517 chr12:109523518 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28460 0 0 1 0 1 Endoplasmic reticulum 0.438538593828858 0.422512454891928 0 0 hPsi_site_22184 iPseU_CNN:0;iRNA_PseU:0 22185 chr20 19998006 19998006 1 + C A rs553270288 19998005 + 19997985 19998025 41 CCGGCAGGGCGGGCGCGGGGTCTTGGCGAACGGTCTTCGGA CCGGCAGGGCGGGCGCGGGGTATTGGCGAACGGTCTTCGGA < 41bp 0.505778506522092 0.831049305516994 0.350393 0.57468057 prediction 0.650541597989803 Functional Gain - NAA20 ENSG00000173418 UTR5 Human protein_coding chr20:19998005 chr20:19998006 . . 0 22 hPsi_associated_SNPs_28461 0 0 1 0 1 Ribosome 0.438452027733797 0.438633630577442 0.14936114 0 hPsi_site_22185 iPseU_CNN:0.14936114;iRNA_PseU:0 22186 chr2 207454155 207454155 1 + C A LUAD 207454154 + 207454134 207454174 41 GGCTGCAGGGTCTGACAAGTTCTGCTATGAAAAGCTGAATA GGCTGCAGGGTCTGACAAGTTATGCTATGAAAAGCTGAATA < 41bp 0.466366784235331 0.825267534981813 0.24928796 0.3194716 prediction 0.650535069963625 Functional Gain - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207454154 chr2:207454155 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28462 0 0 0 0 2 Ribosome 0.438718575169846 0.438718546154935 0 0 hPsi_site_22186 iPseU_CNN:0;iRNA_PseU:0 22187 chr3 42956767 42956767 1 + C A BLCA 42956766 + 42956746 42956786 41 GGAAGGCCTTCAGTCAGAATTCTGTCTTAATTAAGCACCAG GGAAGGCCTTCAGTCAGAATTATGTCTTAATTAAGCACCAG < 41bp 0.533545545226411 0.858811251453007 0.27977443 0.31786865 prediction 0.650531412453192 Functional Gain - ZNF662 ENSG00000182983 CDS Human protein_coding chr3:42956766 chr3:42956767 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_28463 0 0 0 0 0 Nucleus 0.438713516428728 0.438718594872692 0 0 hPsi_site_22187 iPseU_CNN:0;iRNA_PseU:0 22188 chr11 5602535 5602535 1 + G A rs200229730 5602534 + 5602514 5602554 41 CATGGCCTTTGACCGCTATGTGGCCATCTGCTCCCCCCTGC CATGGCCTTTGACCGCTATGTAGCCATCTGCTCCCCCCTGC < 41bp 0.564980207903651 0.890243495630321 0.16925576 0.57801753 prediction 0.65052657545334 Functional Gain - OR52B6 ENSG00000187747 CDS Human protein_coding chr11:5602534 chr11:5602535 synonymous SNV . 0 22 hPsi_associated_SNPs_28464 0 0 0 0 0 unknown 0.438718592995102 0.438718543050316 0.15603506 0 hPsi_site_22188 iPseU_CNN:0.15603506;iRNA_PseU:0 22189 chr7 4825973 4825973 1 + G A BLCA 4825972 + 4825952 4825992 41 CACAGCCCCATGCTGGCCTTTGAATTCATCCAGTTCTGCAG CACAGCCCCATGCTGGCCTTTAAATTCATCCAGTTCTGCAG < 41bp 0.578377501917542 0.903637924417213 0.47819424 0.63595533 prediction 0.650520844999342 Functional Gain - AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4825972 chr7:4825973 nonsynonymous SNV 0.673 3 22 hPsi_associated_SNPs_28465 0 0 1 0 2 chromatin 0.438719092810046 0.438719425614625 0.27191066 0 hPsi_site_22189 iPseU_CNN:0.27191066;iRNA_PseU:0 22190 chr2 206588624 206588624 1 + C A UCEC 206588623 + 206588603 206588643 41 GGCGGTGGCCAAGGATGGCTTCTCTGCGCGTTACTACCTGG GGCGGTGGCCAAGGATGGCTTATCTGCGCGTTACTACCTGG < 41bp 0.453303297823722 0.82525359923455 0.28231627 0.50445926 prediction 0.6505071984691 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206588623 chr2:206588624 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_28466 0 0 0 0 0 Nucleus 0.438718592995018 0.438718592991177 0.00891851999999993 0 hPsi_site_22190 iPseU_CNN:0.00891851999999993;iRNA_PseU:0 22191 chr4 52926663 52926663 1 + G A SKCM 52926662 + 52926642 52926682 41 AAGGTGCAGGGACAACTCTTTGGGATCCTCACAGCAGCAGC AAGGTGCAGGGACAACTCTTTAGGATCCTCACAGCAGCAGC < 41bp 0.409398882233927 0.825253223393229 0.32448417 0.6688659 prediction 0.650506446786458 Functional Gain - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52926662 chr4:52926663 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_28467 0 0 0 0 2 cytosol 0.415248427562623 0.438712985181096 0.3377318 0 hPsi_site_22191 iPseU_CNN:0.3377318;iRNA_PseU:0 22192 chr2 233722106 233722106 1 + G A rs114917134 233722105 + 233722085 233722125 41 AGCTCTCCCGGTCTGAAAGTTGCATTGCCACTGCTAACTTT AGCTCTCCCGGTCTGAAAGTTACATTGCCACTGCTAACTTT < 41bp 0.452722387696966 0.825245155241774 0.44361368 0.89291465 prediction 0.650490310483548 Functional Gain - GIGYF2 ENSG00000182600;ENSG00000204120 UTR5;UTR3 Human other chr2:233722105 chr2:233722106 . . 0 22 hPsi_associated_SNPs_28468 0 0 1 1 0 Nucleus 0.438713562864062 0.438712537719891 0.7858293 0 hPsi_site_22192 iPseU_CNN:0.7858293;iRNA_PseU:0 22193 chr15 24921510 24921510 1 + C A rs569950473 24921509 + 24921489 24921529 41 AGAGTGAAGAAGGATGAGGATCCGGTGCAGATCGAAGGGGA AGAGTGAAGAAGGATGAGGATACGGTGCAGATCGAAGGGGA < 41bp 0.485202294851849 0.825242547865635 0.5556886 0.7629094 prediction 0.650485095731271 Functional Gain - NPAP1 ENSG00000185823 CDS Human protein_coding chr15:24921509 chr15:24921510 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28469 0 0 0 0 0 Nucleus 0.438720408662214 0.438705282763034 0.4144416 0 hPsi_site_22193 iPseU_CNN:0.4144416;iRNA_PseU:0 22194 chr10 119003597 119003597 1 + C A UCEC 119003596 + 119003576 119003616 41 AGACAGCTTCCAGAGCATCTTCTCCTATTATGATAACTCGA AGACAGCTTCCAGAGCATCTTATCCTATTATGATAACTCGA < 41bp 0.521136470736783 0.84637573840854 0.21980369 0.2290825 prediction 0.650478535343514 Functional Gain - SLC18A2 ENSG00000165646 CDS Human protein_coding chr10:119003596 chr10:119003597 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_28470 0 0 0 0 0 nucleus 0.43870705526261 0.438719736119304 0 0 hPsi_site_22194 iPseU_CNN:0;iRNA_PseU:0 22195 chr2 191827605 191827605 1 + G A UCEC 191827604 + 191827584 191827624 41 CTGCACTTTGGACACCATGATGTATTTAAAATTCTCCAAGA CTGCACTTTGGACACCATGATATATTTAAAATTCTCCAAGA < 41bp 0.439949878117433 0.825228486070332 0.1612126 0.2799347 prediction 0.650456972140664 Functional Gain - GLS ENSG00000115419 CDS Human protein_coding chr2:191827604 chr2:191827605 nonsynonymous SNV 0.897 1 22 hPsi_associated_SNPs_28471 0 0 0 1 1 Endoplasmic reticulum 0.438718592547353 0.43871858990545 0 0 hPsi_site_22195 iPseU_CNN:0;iRNA_PseU:0 22196 chr16 58314536 58314536 1 + G A PRAD 58314535 + 58314515 58314555 41 CTTGGATGTGATCCATTTGCTGTAGTCTTCCACCTTGGTGT CTTGGATGTGATCCATTTGCTATAGTCTTCCACCTTGGTGT < 41bp 0.575052978184164 0.900271563009087 0.6069448 0.6882762 prediction 0.650437169649846 Functional Gain - PRSS54 ENSG00000103023 CDS Human protein_coding chr16:58314535 chr16:58314536 synonymous SNV . 0 22 hPsi_associated_SNPs_28472 0 0 1 1 0 exosome 0.438693664679977 0.438715919171513 0.1626628 0 hPsi_site_22196 iPseU_CNN:0.1626628;iRNA_PseU:0 22197 chr2 241537419 241537419 1 + G A UCEC 241537418 + 241537398 241537438 41 AGCCGGCTCTGCCTCCTGCCTGCGGGCACCTACAAGGTTGT AGCCGGCTCTGCCTCCTGCCTACGGGCACCTACAAGGTTGT < 41bp 0.569245243673082 0.894463444090559 0.19797021 0.29319966 prediction 0.650436400834955 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241537418 chr2:241537419 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_28473 0 0 0 0 1 cytosol 0.438718592994671 0.438718592506 0 0 hPsi_site_22197 iPseU_CNN:0;iRNA_PseU:0 22198 chr1 33960529 33960529 1 + C A UCEC 33960528 + 33960508 33960548 41 GTATCAGTAAGGACTTGAATTCTCCTGGACCACACAGCACA GTATCAGTAAGGACTTGAATTATCCTGGACCACACAGCACA < 41bp 0.52906795567294 0.854283921037009 0.32189596 0.41369224 prediction 0.650431930728138 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33960528 chr1:33960529 nonsynonymous SNV 0.098 0 22 hPsi_associated_SNPs_28474 0 0 1 0 0 exosome 0.438271790948918 0.438609664263021 0 0 hPsi_site_22198 iPseU_CNN:0;iRNA_PseU:0 22199 chr5 157181076 157181076 1 + C A UCEC 157181075 + 157181055 157181095 41 GCAAAGCATATGAACGGGATTCTTCACTGACTCTCACTAGG GCAAAGCATATGAACGGGATTATTCACTGACTCTCACTAGG < 41bp 0.541137144573744 0.866345292275633 0.2219652 0.25797635 prediction 0.65041629540378 Functional Gain - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157181075 chr5:157181076 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_28475 0 0 1 0 1 Ribosome 0.414322753243821 0.438336697247996 0 0 hPsi_site_22199 iPseU_CNN:0;iRNA_PseU:0 22200 chr1 203677201 203677201 1 + C A CESC 203677200 + 203677180 203677220 41 ACCTCATTGTCAATGGCATTTCTATCAACAGTGCTTATACC ACCTCATTGTCAATGGCATTTATATCAACAGTGCTTATACC < 41bp 0.456791324891631 0.825202678083603 0.40022823 0.42564097 prediction 0.650405356167205 Functional Gain - ATP2B4 ENSG00000058668 CDS Human protein_coding chr1:203677200 chr1:203677201 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28476 0 0 1 0 1 Endoplasmic reticulum 0.438718453321573 0.438694436158661 0 0 hPsi_site_22200 iPseU_CNN:0;iRNA_PseU:0 22201 chr17 4645699 4645699 1 + G T SARC 4645698 + 4645678 4645718 41 TGGCAGCGGTGCCCAGATGATGTGAGTCACCGATTTTGGTG TGGCAGCGGTGCCCAGATGATTTGAGTCACCGATTTTGGTG < 41bp 0.492685405926247 0.825202526742306 0.25276402 0.3223775 prediction 0.650405053484611 Functional Gain - ZMYND15 ENSG00000141497 CDS Human protein_coding chr17:4645698 chr17:4645699 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28477 0 0 0 0 2 Cytosol 0.440793916615503 0.438820018433113 0 0 hPsi_site_22201 iPseU_CNN:0;iRNA_PseU:0 22202 chr14 20979011 20979011 1 + G A COAD 20979010 + 20978990 20979030 41 TGATATGATGGCACACAAGATGAAGGAGCCCAGTCAGAGTT TGATATGATGGCACACAAGATAAAGGAGCCCAGTCAGAGTT < 41bp 0.563990977719126 0.88918726989038 0.291605 0.3985567 prediction 0.650392584342509 Functional Gain - RNASE10 ENSG00000182545 CDS Human protein_coding chr14:20979010 chr14:20979011 nonsynonymous SNV 0.134 0 22 hPsi_associated_SNPs_28478 0 0 0 0 0 exosome 0.437201008796485 0.438492389290439 0 0 hPsi_site_22202 iPseU_CNN:0;iRNA_PseU:0 22203 chr5 120022237 120022237 1 + C A HNSC 120022236 + 120022216 120022256 41 AAGATTCCTCACCAAGGCCCTCCCCTCCCTCCTACACCCCA AAGATTCCTCACCAAGGCCCTACCCTCCCTCCTACACCCCA < 41bp 0.54816122069087 0.873354676008703 0.23839605 0.7262522 prediction 0.650386910635666 Functional Gain - PRR16 ENSG00000184838 CDS Human protein_coding chr5:120022236 chr5:120022237 nonsynonymous SNV 0.810 0 22 hPsi_associated_SNPs_28479 0 0 0 0 0 Cytosol 0.438733131512589 0.438718663807278 0.4525044 0 hPsi_site_22203 iPseU_CNN:0.4525044;iRNA_PseU:0 22204 chr11 126277476 126277476 1 + G A rs201389657 126277475 + 126277455 126277495 41 GGTACTTTTTGTAGAGGATCTGCTCCTCCGGGTGCTAGCCA GGTACTTTTTGTAGAGGATCTACTCCTCCGGGTGCTAGCCA < 41bp 0.411362573402727 0.825159890227092 0.39225987 0.93334246 prediction 0.650319780454184 Functional Gain - ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126277475 chr11:126277476 synonymous SNV . 0 22 hPsi_associated_SNPs_28480 0 0 1 0 2 Ribosome 0.438718592899019 0.438718573040313 0.86668492 0 hPsi_site_22204 iPseU_CNN:0.86668492;iRNA_PseU:0 22205 chr14 20296231 20296231 1 + C A UCEC 20296230 + 20296210 20296250 41 CAACAGTGGCCTGATGACACTCCTGTGCTTTCTGGGGCTTC CAACAGTGGCCTGATGACACTACTGTGCTTTCTGGGGCTTC < 41bp 0.478742794267142 0.825154993218285 0.17779967 0.33998626 prediction 0.65030998643657 Functional Gain - OR4N2 ENSG00000176294 CDS Human protein_coding chr14:20296230 chr14:20296231 synonymous SNV . 0 22 hPsi_associated_SNPs_28481 0 0 0 0 0 unknown 0.438730928739067 0.439046282869225 0 0 hPsi_site_22205 iPseU_CNN:0;iRNA_PseU:0 22206 chr12 49220781 49220781 1 + G A CESC 49220780 + 49220760 49220800 41 TCATTTGATGTGATTCTGGATGAGAACCAGCTGGAGGATGC TCATTTGATGTGATTCTGGATAAGAACCAGCTGGAGGATGC < 41bp 0.406226133472063 0.82514785658378 0.28592616 0.61312264 prediction 0.650295713167561 Functional Gain - CACNB3 ENSG00000167535 CDS Human protein_coding chr12:49220780 chr12:49220781 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28482 0 0 1 0 1 Ribosome 0.435570361886424 0.442027519123404 0.22624528 0 hPsi_site_22206 iPseU_CNN:0.22624528;iRNA_PseU:0 22207 chr17 25637155 25637155 1 + C A BRCA 25637154 + 25637134 25637174 41 ACCGGTGGGTACGATCTGTATCTTTTAGCCATGATGGACTG ACCGGTGGGTACGATCTGTATATTTTAGCCATGATGGACTG < 41bp 0.535353012823663 0.860498234143543 0.4453242 0.3788109 prediction 0.650290442639759 Functional Gain - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25637154 chr17:25637155 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28483 0 0 1 0 2 Cytosol 0.438715916249264 0.438718935166904 0 0 hPsi_site_22207 iPseU_CNN:0;iRNA_PseU:0 22208 chr11 5509981 5509981 1 + C A UCEC 5509980 + 5509960 5510000 41 TAACCATCTTCCAGACACCTTCTTCTTAACAGGGATCCCAG TAACCATCTTCCAGACACCTTATTCTTAACAGGGATCCCAG < 41bp 0.512921422963181 0.838062210102315 0.27824908 0.37044758 prediction 0.650281574278269 Functional Gain - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5509980 chr11:5509981 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_28484 0 0 0 0 0 chromatin 0.438718593328667 0.438727418726355 0 0 hPsi_site_22208 iPseU_CNN:0;iRNA_PseU:0 22209 chr9 109734443 109734443 1 + C A UCEC 109734442 + 109734422 109734462 41 AGCCGTGCTTCACTGCGAATTCTGTGAATTCTCCTCCGGCT AGCCGTGCTTCACTGCGAATTATGTGAATTCTCCTCCGGCT < 41bp 0.447575496786313 0.825135386407699 0.4773077 0.60591644 prediction 0.650270772815397 Functional Gain - ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109734442 chr9:109734443 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28485 0 0 0 0 0 exosome 0.438706011257422 0.298606512264667 0.21183288 0 hPsi_site_22209 iPseU_CNN:0.21183288;iRNA_PseU:0 22210 chr17 56274340 56274340 1 + G A OV 56274339 + 56274319 56274359 41 GCATCAAGAACCAGCGTGACTGCATCCCTTTCTTCCGCTCG GCATCAAGAACCAGCGTGACTACATCCCTTTCTTCCGCTCG < 41bp 0.406068781127018 0.82513412263951 0.41853696 0.76801276 prediction 0.65026824527902 Functional Gain - EPX ENSG00000121053 CDS Human protein_coding chr17:56274339 chr17:56274340 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_28486 0 0 0 0 1 chromatin 0.438622164686443 0.438630578326846 0.53602552 0 hPsi_site_22210 iPseU_CNN:0.53602552;iRNA_PseU:0 22211 chr19 36243989 36243989 1 + C T UCEC 36243990 - 36243970 36244010 41 GAACAGCTTGATCACATATGTGTCTGGGAAGGTGGGGATGG GAACAGCTTGATCACATATGTATCTGGGAAGGTGGGGATGG < 41bp 0.562836899720997 0.88796904144753 0.25238794 0.34277156 prediction 0.650264283453066 Functional Gain - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36243990 chr19:36243989 synonymous SNV . 0 22 hPsi_associated_SNPs_28487 0 0 0 0 0 Cytosol 0.43871859602554 0.438718595438566 0 0 hPsi_site_22211 iPseU_CNN:0;iRNA_PseU:0 22212 chr14 64891551 64891551 1 + G T HNSC 64891550 + 64891530 64891570 41 AAACCAAATGGGAGAAAAGTTGTGGGTGATGTGGCATACGA AAACCAAATGGGAGAAAAGTTTTGGGTGATGTGGCATACGA < 41bp 0.504250778341434 0.829376526121593 0.27667028 0.66720587 prediction 0.650251495560318 Functional Gain - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64891550 chr14:64891551 nonsynonymous SNV 0.953 2 22 hPsi_associated_SNPs_28488 0 0 1 0 2 Nucleus 0.438718527184595 0.438718590918823 0.33441174 0 hPsi_site_22212 iPseU_CNN:0.33441174;iRNA_PseU:0 22213 chr3 45636696 45636696 1 + G A rs74843221 45636695 + 45636675 45636715 41 GCTGCCAAGCCTCCTCTTGCTGCCTCGACAGGGGCACCTGG GCTGCCAAGCCTCCTCTTGCTACCTCGACAGGGGCACCTGG < 41bp 0.433347686909148 0.825124425363404 0.3071609 0.6960878 prediction 0.650248850726808 Functional Gain - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45636695 chr3:45636696 nonsynonymous SNV 0.846 0 22 hPsi_associated_SNPs_28489 0 0 1 0 0 Ribosome 0.439164285763185 0.438697669918359 0.3921756 0 hPsi_site_22213 iPseU_CNN:0.3921756;iRNA_PseU:0 22214 chr6 170639575 170639575 1 + G T LUSC 170639574 + 170639554 170639594 41 CTAGCTGTCAAGGAGTGGTTTGTGTATCCTGGGAACCCACT CTAGCTGTCAAGGAGTGGTTTTTGTATCCTGGGAACCCACT < 41bp 0.514920511926768 0.840042909969187 0.306884 0.32370043 prediction 0.650244796084839 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170639574 chr6:170639575 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_28490 0 0 1 0 2 Cytosol 0.438718770371597 0.438718592685071 0 0 hPsi_site_22214 iPseU_CNN:0;iRNA_PseU:0 22215 chr1 28864461 28864461 1 + C A HNSC 28864460 + 28864440 28864480 41 TGGAGAACCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAG TGGAGAACCGTGTGGTCTTATATGTGTCCAGCGGGGGCCAG < 41bp 0.536533922052695 0.861648110665848 0.32473245 0.40651134 prediction 0.650228377226305 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28864460 chr1:28864461 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_28491 0 0 1 0 0 Ribosome 0.438718609353759 0.438718480649593 0 0 hPsi_site_22215 iPseU_CNN:0;iRNA_PseU:0 22216 chr5 72801092 72801092 1 + G A rs545142219 72801091 + 72801071 72801111 41 CAACTTCTGAAGATAAAACCTGAAGAAGTTACTGGGAGCTG CAACTTCTGAAGATAAAACCTAAAGAAGTTACTGGGAGCTG < 41bp 0.451036702695418 0.825111765185448 0.14379564 0.16185102 prediction 0.650223530370896 Functional Gain - BTF3 ENSG00000145741 UTR3 Human protein_coding chr5:72801091 chr5:72801092 . . 0 22 hPsi_associated_SNPs_28492 0 0 1 4 1 Ribosome 0.438719096628223 0.43871859305315 0 0 hPsi_site_22216 iPseU_CNN:0;iRNA_PseU:0 22217 chr11 5444261 5444261 1 + C A UCEC 5444260 + 5444240 5444280 41 CTCTCCACTGGTCCATGTTATCATGGCCAATATCTACCTGC CTCTCCACTGGTCCATGTTATAATGGCCAATATCTACCTGC < 41bp 0.522322108963089 0.847428184382468 0.64373046 0.88416374 prediction 0.650212150838759 Functional Gain - OR51Q1 ENSG00000167360 CDS Human protein_coding chr11:5444260 chr11:5444261 synonymous SNV . 0 22 hPsi_associated_SNPs_28493 0 0 0 0 0 chromatin 0.438761765369905 0.438747281708759 0.48086656 0 hPsi_site_22217 iPseU_CNN:0.48086656;iRNA_PseU:0 22218 chr7 150747241 150747241 1 + G A LUAD 150747240 + 150747220 150747260 41 ACATTTAACTCTGGCGCTGATGGGGCAGAGCTGCTCACCAC ACATTTAACTCTGGCGCTGATAGGGCAGAGCTGCTCACCAC < 41bp 0.400414427570375 0.825104907154076 0.23674443 0.28749675 prediction 0.650209814308152 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150747240 chr7:150747241 nonsynonymous SNV 0.551 2 22 hPsi_associated_SNPs_28494 0 0 1 0 1 exosome 0.438718292478677 0.43871747178775 0 0 hPsi_site_22218 iPseU_CNN:0;iRNA_PseU:0 22219 chr1 109779976 109779976 1 + G A LUSC 109779975 + 109779955 109779995 41 CATCACTGTGCCTGAGAAATTGAAGGAGTTCATGCCGCCAG CATCACTGTGCCTGAGAAATTAAAGGAGTTCATGCCGCCAG < 41bp 0.558879681124546 0.883978903141668 0.26862597 0.27203852 prediction 0.650198444034243 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109779975 chr1:109779976 synonymous SNV . 0 22 hPsi_associated_SNPs_28495 0 0 1 0 1 Ribosome 0.438290184638333 0.438722747342916 0 0 hPsi_site_22219 iPseU_CNN:0;iRNA_PseU:0 22220 chr2 183594626 183594626 1 + G A UCEC 183594625 + 183594605 183594645 41 AAGGAGAGTTTAGTGAGTTTTGCAATGCAGCATGTTAGAAG AAGGAGAGTTTAGTGAGTTTTACAATGCAGCATGTTAGAAG < 41bp 0.42492803842178 0.825095168090051 0.41587788 0.6627009 prediction 0.650190336180102 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183594625 chr2:183594626 nonsynonymous SNV 0.575 1 22 hPsi_associated_SNPs_28496 0 0 1 2 2 Ribosome 0.439237732573421 0.438832275550277 0.3254018 0 hPsi_site_22220 iPseU_CNN:0.3254018;iRNA_PseU:0 22221 chr10 43678830 43678830 1 + G A UCEC 43678829 + 43678809 43678849 41 ACCTCTGGCATGAAAAGCGCTGTGCTGATGAGCTGACCCCC ACCTCTGGCATGAAAAGCGCTATGCTGATGAGCTGACCCCC < 41bp 0.422670800818436 0.825093640173934 0.3180923 0.522358 prediction 0.650187280347867 Functional Gain - CSGALNACT2 ENSG00000169826 CDS Human protein_coding chr10:43678829 chr10:43678830 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28497 0 0 1 0 0 Endoplasmic reticulum 0.438702819817111 0.438709470632213 0.044716 0 hPsi_site_22221 iPseU_CNN:0.044716;iRNA_PseU:0 22222 chr1 232940839 232940839 1 + C A GBM 232940838 + 232940818 232940858 41 AGGAAGGAGAGTCCTGATTTTCTTTCAATATTCCTCAGGTA AGGAAGGAGAGTCCTGATTTTATTTCAATATTCCTCAGGTA < 41bp 0.501816660420067 0.826910045651201 0.535053 0.6329838 prediction 0.650186770462269 Functional Gain - MAP10 ENSG00000212916 CDS Human protein_coding chr1:232940838 chr1:232940839 nonsynonymous SNV 0.020 1 22 hPsi_associated_SNPs_28498 0 0 0 0 0 exosome 0.438718579981813 0.43871656793102 0.1958616 0 hPsi_site_22222 iPseU_CNN:0.1958616;iRNA_PseU:0 22223 chr16 815012 815012 1 + G A rs200024018 815011 + 814991 815031 41 GGCTCCCGAGCGACAGCGGCTGCTGCCTGCGGCTCTGGCCT GGCTCCCGAGCGACAGCGGCTACTGCCTGCGGCTCTGGCCT < 41bp 0.563126225051812 0.888215048140864 0.27586192 0.54457885 prediction 0.650177646178104 Functional Gain - MSLN ENSG00000102854 CDS Human protein_coding chr16:815011 chr16:815012 synonymous SNV . 0 22 hPsi_associated_SNPs_28499 0 0 0 0 2 nucleus 0.438715336919259 0.438576321454604 0.0891576999999999 0 hPsi_site_22223 iPseU_CNN:0.0891576999999999;iRNA_PseU:0 22224 chr4 71255530 71255530 1 + C A GBM 71255529 + 71255509 71255549 41 CCTCCTCCCGCACCCTATGGTCCAGGGATATTTCCACCACC CCTCCTCCCGCACCCTATGGTACAGGGATATTTCCACCACC < 41bp 0.526935626419882 0.852019571659127 0.2574441 0.5448679 prediction 0.650167890478488 Functional Gain - SMR3B ENSG00000171201 CDS Human protein_coding chr4:71255529 chr4:71255530 nonsynonymous SNV 0.019 0 22 hPsi_associated_SNPs_28500 0 0 0 0 0 unknown 0.438718384443079 0.438718616412473 0.0897357999999999 0 hPsi_site_22224 iPseU_CNN:0.0897357999999999;iRNA_PseU:0 22225 chr1 77763313 77763313 1 + C A UCEC 77763312 + 77763292 77763332 41 GATATGGATTCCAATACATTTCTGTGGGAGAATTATTAAGA GATATGGATTCCAATACATTTATGTGGGAGAATTATTAAGA < 41bp 0.476925909380756 0.825076242267441 0.3753961 0.5206612 prediction 0.650152484534881 Functional Gain - AK5 ENSG00000154027 CDS Human protein_coding chr1:77763312 chr1:77763313 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_28501 0 0 0 0 1 Nucleus 0.438720005566922 0.438718570871992 0.0413224000000001 0 hPsi_site_22225 iPseU_CNN:0.0413224000000001;iRNA_PseU:0 22226 chr20 44259673 44259673 1 + G A rs1487322 44259672 + 44259652 44259692 41 CTGTGAGTGGGAGAGTGGGCTGGGATGTGCATCCTGCTTCC CTGTGAGTGGGAGAGTGGGCTAGGATGTGCATCCTGCTTCC < 41bp 0.497808904745862 0.825072365843736 0.19605461 0.29728496 prediction 0.650144731687472 Functional Gain - WFDC10A ENSG00000180305 UTR3 Human protein_coding chr20:44259672 chr20:44259673 . . 0 22 hPsi_associated_SNPs_28502 0 0 0 0 0 unknown 0.438718568680145 0.438710522792372 0 0 hPsi_site_22226 iPseU_CNN:0;iRNA_PseU:0 22227 chr2 242610760 242610760 1 + G A UCEC 242610759 + 242610739 242610779 41 GGAGGTGCCCTGCCCATGTTTGAGCTGGTGGAGCTGCAGCC GGAGGTGCCCTGCCCATGTTTAAGCTGGTGGAGCTGCAGCC < 41bp 0.582988200217911 0.908059800681876 0.32320517 0.36283195 prediction 0.65014320092793 Functional Gain - ATG4B ENSG00000168397 CDS Human protein_coding chr2:242610759 chr2:242610760 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28503 0 0 1 0 4 Ribosome 0.43872093643497 0.438718827714743 0 0 hPsi_site_22227 iPseU_CNN:0;iRNA_PseU:0 22228 chr17 47335887 47335887 1 + G A rs76902084 47335886 + 47335866 47335906 41 AAGTACCAGGATTATAGGCATGAGCCACTGTGCCAGGCCCA AAGTACCAGGATTATAGGCATAAGCCACTGTGCCAGGCCCA < 41bp 0.485226645645477 0.825068975961799 0.28967977 0.36252013 prediction 0.650137951923598 Functional Gain - FLJ40194 ENSG00000177369 ncRNA_exonic Human processed_transcript chr17:47335886 chr17:47335887 . . 0 22 hPsi_associated_SNPs_28504 0 0 0 0 1 unknown 0.438674350671872 0.438718593040125 0 0 hPsi_site_22228 iPseU_CNN:0;iRNA_PseU:0 22229 chr22 18072911 18072911 1 + G A LIHC 18072910 + 18072890 18072930 41 CCTTCATGAAAGGCGCTGGCTGCCGGGCACTGGTCATAGCA CCTTCATGAAAGGCGCTGGCTACCGGGCACTGGTCATAGCA < 41bp 0.416630694018271 0.825067931087682 0.16388023 0.4976809 prediction 0.650135862175363 Functional Gain - SLC25A18 ENSG00000182902 CDS Human protein_coding chr22:18072910 chr22:18072911 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_28505 0 0 0 0 1 exosome 0.438747954861605 0.436810719145195 0 0 hPsi_site_22229 iPseU_CNN:0;iRNA_PseU:0 22230 chr2 48010413 48010413 1 + C A LGG 48010412 + 48010392 48010432 41 TGTACAGCTTCTTCCCCAAGTCTCCGGCGCTGAGTGATGCC TGTACAGCTTCTTCCCCAAGTATCCGGCGCTGAGTGATGCC < 41bp 0.509725647899564 0.834793562411684 0.2867755 0.40742797 prediction 0.65013582902424 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48010412 chr2:48010413 nonsynonymous SNV 0.853 2 22 hPsi_associated_SNPs_28506 0 0 1 0 0 Nucleus 0.438718592996466 0.43872747216823 0 0 hPsi_site_22230 iPseU_CNN:0;iRNA_PseU:0 22231 chr5 180651512 180651512 1 + G A UCEC 180651511 + 180651491 180651531 41 TCTAGACCCCGTCACCCCACTGCCCCCGCCTCCAGCCCCTC TCTAGACCCCGTCACCCCACTACCCCCGCCTCCAGCCCCTC < 41bp 0.411474171152933 0.825046526189413 0.22941208 0.643984 prediction 0.650093052378827 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651511 chr5:180651512 synonymous SNV . 0 22 hPsi_associated_SNPs_28507 0 0 1 0 0 chromatin 0.43871253774839 0.438689843614699 0.287968 0 hPsi_site_22231 iPseU_CNN:0.287968;iRNA_PseU:0 22232 chr9 91616199 91616199 1 + G A BLCA 91616198 + 91616178 91616218 41 TTACCAGTACGTGGGGAAGTTGGCGGGCAGGCTGAAGGAGG TTACCAGTACGTGGGGAAGTTAGCGGGCAGGCTGAAGGAGG < 41bp 0.425306314438518 0.825044361993508 0.28722703 0.6523312 prediction 0.650088723987015 Functional Gain - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616198 chr9:91616199 synonymous SNV . 0 22 hPsi_associated_SNPs_28508 0 0 0 0 0 cytosol 0.438717717252814 0.438718530673732 0.3046624 0 hPsi_site_22232 iPseU_CNN:0.3046624;iRNA_PseU:0 22233 chr11 65714403 65714403 1 + C A UCEC 65714402 + 65714382 65714422 41 ATCAAGACCTGCAGCAGAGGTCTCAGAGCTCAAGGCAGACA ATCAAGACCTGCAGCAGAGGTATCAGAGCTCAAGGCAGACA < 41bp 0.461551662500185 0.825039509318582 0.29381257 0.51429456 prediction 0.650079018637163 Functional Gain - TSGA10IP ENSG00000175513 CDS Human protein_coding chr11:65714402 chr11:65714403 unknown 0.026 2 22 hPsi_associated_SNPs_28509 0 0 0 1 1 exosome 0.437936232658789 0.438705313515524 0.0285891199999999 0 hPsi_site_22233 iPseU_CNN:0.0285891199999999;iRNA_PseU:0 22234 chr3 51718563 51718563 1 + G A OV 51718562 + 51718542 51718582 41 CTTCCCGGCACCCAGCCATGTGGTGACAGCCACCTTCCCCT CTTCCCGGCACCCAGCCATGTAGTGACAGCCACCTTCCCCT < 41bp 0.406456981358065 0.825039091790722 0.21140724 0.32074898 prediction 0.650078183581444 Functional Gain - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51718562 chr3:51718563 synonymous SNV . 0 22 hPsi_associated_SNPs_28510 0 0 1 0 1 Ribosome 0.438727905273339 0.438718644922688 0 0 hPsi_site_22234 iPseU_CNN:0;iRNA_PseU:0 22235 chr14 52192521 52192521 1 + C A COAD 52192520 + 52192500 52192540 41 TGATTGTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCA TGATTGTGAAAGAAATTGGGTATTCCACCTCGAGCTCTTCA < 41bp 0.464286146370407 0.825030749624464 0.39153033 0.6304783 prediction 0.650061499248928 Functional Gain - FRMD6 ENSG00000139926 CDS Human protein_coding chr14:52192520 chr14:52192521 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_28511 0 0 1 0 1 nucleus 0.438718226337035 0.438718588553077 0.2609566 0 hPsi_site_22235 iPseU_CNN:0.2609566;iRNA_PseU:0 22236 chr16 58438535 58438535 1 + G A SARC 58438534 + 58438514 58438554 41 ACAGGGCAGAAAGGACTGAATGACTTTCAGTGTTGGGAGAA ACAGGGCAGAAAGGACTGAATAACTTTCAGTGTTGGGAGAA < 41bp 0.436671073211474 0.825030603932723 0.24627653 0.35409322 prediction 0.650061207865447 Functional Gain - GINS3 ENSG00000181938 CDS Human protein_coding chr16:58438534 chr16:58438535 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28512 0 0 1 0 0 Ribosome 0.43871866243385 0.438648714179861 0 0 hPsi_site_22236 iPseU_CNN:0;iRNA_PseU:0 22237 chrX 64960509 64960509 1 + G A rs6525007 64960508 + 64960488 64960528 41 AAGATCCTACCCCAATTCCTTGTAGGAGTATAGGCCGGTCT AAGATCCTACCCCAATTCCTTATAGGAGTATAGGCCGGTCT < 41bp 0.56597147566702 0.891000447908675 0.2936685 0.2736679 prediction 0.650057944483309 Functional Gain - MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960508 chrX:64960509 . . 0 22 hPsi_associated_SNPs_28513 0 0 1 0 0 Ribosome 0.438735047986933 0.438718905485043 0 0 hPsi_site_22237 iPseU_CNN:0;iRNA_PseU:0 22238 chr2 95941743 95941743 1 + G T LUAD 95941742 + 95941722 95941762 41 GGGCCTCTACCTGCTGCTGGTGCCCACTGCCGGGCTTTGCT GGGCCTCTACCTGCTGCTGGTTCCCACTGCCGGGCTTTGCT < 41bp 0.50150213135801 0.826530119429182 0.19329336 0.2077372 prediction 0.650055976142344 Functional Gain - PROM2 ENSG00000155066 CDS Human protein_coding chr2:95941742 chr2:95941743 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28514 0 0 0 0 1 Ribosome 0.438712341934286 0.438718592923474 0 0 hPsi_site_22238 iPseU_CNN:0;iRNA_PseU:0 22239 chr19 2418030 2418030 1 + C A UCEC 2418029 + 2418009 2418049 41 CCGAGCTCCTGCAGAAGGCGTCCGTGGGCATCATAGACCAG CCGAGCTCCTGCAGAAGGCGTACGTGGGCATCATAGACCAG < 41bp 0.448340930659679 0.825027119248554 0.26226294 0.8109899 prediction 0.650054238497107 Functional Gain - TMPRSS9 ENSG00000178297 CDS Human protein_coding chr19:2418029 chr19:2418030 nonsynonymous SNV 0.037 4 22 hPsi_associated_SNPs_28515 0 0 0 0 1 chromatin 0.438718593766111 0.438718530974063 0.6219798 0 hPsi_site_22239 iPseU_CNN:0.6219798;iRNA_PseU:0 22240 chr3 113517246 113517246 1 + C A UCEC 113517245 + 113517225 113517265 41 AGGACGAAAGCTAAGGAAATTCTGCAGGAAGAAGAAGACCT AGGACGAAAGCTAAGGAAATTATGCAGGAAGAAGAAGACCT < 41bp 0.533254266548921 0.858266330348952 0.21306229 0.29495594 prediction 0.650024127600061 Functional Gain - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113517245 chr3:113517246 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28516 0 0 1 0 1 Ribosome 0.438718593076831 0.438718592993503 0 0 hPsi_site_22240 iPseU_CNN:0;iRNA_PseU:0 22241 chr17 41345463 41345463 1 + G T UCEC 41345462 + 41345442 41345482 41 CCATGTGGGAGTTGTATCTGTGGAGTTCATTGCCCCAGCCT CCATGTGGGAGTTGTATCTGTTGAGTTCATTGCCCCAGCCT < 41bp 0.50692726127648 0.831936004565583 0.22679135 0.3044011 prediction 0.650017486578206 Functional Gain - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345462 chr17:41345463 synonymous SNV . 0 22 hPsi_associated_SNPs_28517 0 0 1 0 1 Cytosol 0.438718590786178 0.438718592894832 0 0 hPsi_site_22241 iPseU_CNN:0;iRNA_PseU:0 22242 chr2 32875249 32875249 1 + G T LUAD 32875248 + 32875228 32875268 41 AATATTCATCAGCATTTGCTTGAGGAACGCTCACCTCTGCT AATATTCATCAGCATTTGCTTTAGGAACGCTCACCTCTGCT < 41bp 0.506873920705434 0.831882310688994 0.2214948 0.66491675 prediction 0.650016779967119 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32875248 chr2:32875249 stopgain 0.995 1 22 hPsi_associated_SNPs_28518 0 0 0 0 2 Nucleus 0.438718684800798 0.438722672729492 0.3298335 0 hPsi_site_22242 iPseU_CNN:0.3298335;iRNA_PseU:0 22243 chr11 111598616 111598616 1 + C A rs572866014 111598615 + 111598595 111598635 41 AGTGGCGCTCCTTTTTGGGGTCCTCCAGCCTCTAGTCAAGC AGTGGCGCTCCTTTTTGGGGTACTCCAGCCTCTAGTCAAGC < 41bp 0.504913512637566 0.82991915454473 0.18250224 0.8032559 prediction 0.650011283814329 Functional Gain - PPP2R1B ENSG00000170145 UTR3 Human protein_coding chr11:111598615 chr11:111598616 . . 0 22 hPsi_associated_SNPs_28519 0 0 0 0 0 Nucleus 0.438718590029727 0.43886750485791 0.6065118 0 hPsi_site_22243 iPseU_CNN:0.6065118;iRNA_PseU:0 22244 chr5 121488107 121488107 1 + C A UCEC 121488106 + 121488086 121488126 41 CAGAACCCTCCAAACCACAGTCTCTCAGCAGCAGTGGGTCC CAGAACCCTCCAAACCACAGTATCTCAGCAGCAGTGGGTCC < 41bp 0.448414497775996 0.825001109062916 0.27601534 0.4097317 prediction 0.650002218125832 Functional Gain - ZNF474 ENSG00000164185 CDS Human protein_coding chr5:121488106 chr5:121488107 nonsynonymous SNV 0.088 1 22 hPsi_associated_SNPs_28520 0 0 0 0 0 membrane 0.438715919845131 0.43739715816273 0 0 hPsi_site_22244 iPseU_CNN:0;iRNA_PseU:0 22245 chr1 113657135 113657135 1 + C A PAAD 113657134 + 113657114 113657154 41 CAGTGCATAGCTGGAGGGAGTCCTGCCCCTCGTCTCAACTG CAGTGCATAGCTGGAGGGAGTACTGCCCCTCGTCTCAACTG < 41bp 0.448758193549745 0.824999815641426 0.330699 0.71453285 prediction 0.649999631282853 Functional Gain - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113657134 chr1:113657135 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_28521 0 0 1 0 1 Nucleus 0.438734812466629 0.438725691987015 0.4290657 0 hPsi_site_22245 iPseU_CNN:0.4290657;iRNA_PseU:0 22246 chr6 158994507 158994507 1 + G A rs146748290 158994506 + 158994486 158994526 41 CGCCACTTTGTCCTCGTGTTTGTCGTCTTCTTCATCTGCTT CGCCACTTTGTCCTCGTGTTTATCGTCTTCTTCATCTGCTT < 41bp 0.579446801804243 0.904444194060175 0.28339487 0.5369273 prediction 0.649994784511865 Functional Gain - TMEM181 ENSG00000146433 CDS Human protein_coding chr6:158994506 chr6:158994507 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28522 0 0 1 0 2 Ribosome 0.438745740196768 0.438713496064514 0.0738546 0 hPsi_site_22246 iPseU_CNN:0.0738546;iRNA_PseU:0 22247 chr20 25656124 25656124 1 + G A SKCM 25656123 + 25656103 25656143 41 TTGCCCACATTCACTACAGATGAAAGGCTTCTCCCCTGAGT TTGCCCACATTCACTACAGATAAAAGGCTTCTCCCCTGAGT < 41bp 0.552982606115137 0.877977347914327 0.27810195 0.6309831 prediction 0.64998948359838 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656123 chr20:25656124 synonymous SNV . 0 22 hPsi_associated_SNPs_28523 0 0 0 0 0 Cytosol 0.438719606623531 0.438721091128004 0.2619662 0 hPsi_site_22247 iPseU_CNN:0.2619662;iRNA_PseU:0 22248 chrX 46433870 46433870 1 + G A UCEC 46433869 + 46433849 46433889 41 CCGCTGCGACTTCTCCGTGCTGCGGCTGTACGCGCCGCCGG CCGCTGCGACTTCTCCGTGCTACGGCTGTACGCGCCGCCGG < 41bp 0.570440955334965 0.89543061599395 0.28535035 0.8513046 prediction 0.649979321317969 Functional Gain - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46433869 chrX:46433870 synonymous SNV . 0 22 hPsi_associated_SNPs_28524 0 0 1 0 0 Endoplasmic reticulum 0.438606389197933 0.438713747382792 0.7026092 0 hPsi_site_22248 iPseU_CNN:0.7026092;iRNA_PseU:0 22249 chr2 79254978 79254978 1 + G A UCS 79254977 + 79254957 79254997 41 TGGGAGTGGAGTAGCACTGATGTGATGAATTACTTTGCATG TGGGAGTGGAGTAGCACTGATATGATGAATTACTTTGCATG < 41bp 0.415929992482582 0.824989013999178 0.2805776 0.34193075 prediction 0.649978027998355 Functional Gain - REG3G ENSG00000143954 CDS Human protein_coding chr2:79254977 chr2:79254978 nonsynonymous SNV 0.085 0 22 hPsi_associated_SNPs_28525 0 0 0 0 2 unknown 0.438750246486281 0.438780328874202 0 0 hPsi_site_22249 iPseU_CNN:0;iRNA_PseU:0 22250 chr9 131150102 131150102 1 + C A COAD 131150101 + 131150081 131150121 41 GCATTCCTTTCCAGGGGACATCCGGAACCTGCTCATCTGGA GCATTCCTTTCCAGGGGACATACGGAACCTGCTCATCTGGA < 41bp 0.46526679096499 0.824984477206707 0.23622322 0.6310359 prediction 0.649968954413415 Functional Gain - URM1 ENSG00000167118 CDS Human protein_coding chr9:131150101 chr9:131150102 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_28526 0 0 1 0 2 Ribosome 0.438718592994306 0.438718612181242 0.2620718 0 hPsi_site_22250 iPseU_CNN:0.2620718;iRNA_PseU:0 22251 chr2 113484277 113484277 1 + G A CESC 113484276 + 113484256 113484296 41 CACATGGATGGGAGCAGTTGTGAGCTGCAAGTCATCAACTT CACATGGATGGGAGCAGTTGTAAGCTGCAAGTCATCAACTT < 41bp 0.43016608866201 0.824984373538958 0.3173648 0.47371227 prediction 0.649968747077917 Functional Gain - NT5DC4 ENSG00000144130 CDS Human protein_coding chr2:113484276 chr2:113484277 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_28527 0 0 0 0 2 chromatin 0.438673439617619 0.434925059214225 0 0 hPsi_site_22251 iPseU_CNN:0;iRNA_PseU:0 22252 chr3 169500308 169500308 1 + C A THCA 169500307 + 169500287 169500327 41 AGGTGTGGACAGAGATTTGCTCAAGCCAGCACACTGACCTA AGGTGTGGACAGAGATTTGCTAAAGCCAGCACACTGACCTA < 41bp 0.535718543732349 0.860696600077869 0.29095924 0.39379174 prediction 0.64995611269104 Functional Gain - MYNN ENSG00000085274 CDS Human protein_coding chr3:169500307 chr3:169500308 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_28528 0 0 0 2 1 Nucleus 0.438718177925863 0.438718776974524 0 0 hPsi_site_22252 iPseU_CNN:0;iRNA_PseU:0 22253 chr9 140137915 140137915 1 + G A BRCA 140137914 + 140137894 140137934 41 CACCGAGGCCGAGAGCAACATGAATGACCTGGTGTCCGAGT CACCGAGGCCGAGAGCAACATAAATGACCTGGTGTCCGAGT < 41bp 0.565238297701925 0.890209918102053 0.32323626 0.472665 prediction 0.649943240800256 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137914 chr9:140137915 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_28529 0 0 1 0 0 Cytosol 0.439034822925722 0.438712232858957 0 0 hPsi_site_22253 iPseU_CNN:0;iRNA_PseU:0 22254 chr16 57089359 57089359 1 + G A ACC 57089358 + 57089338 57089378 41 CGTCCAGCAGGTTCACAGGCTGCAGCCTCAGCCAGGAGCAC CGTCCAGCAGGTTCACAGGCTACAGCCTCAGCCAGGAGCAC < 41bp 0.420342646852313 0.824970258279136 0.34226203 0.66378313 prediction 0.649940516558271 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57089358 chr16:57089359 nonsynonymous SNV 0.445 2 22 hPsi_associated_SNPs_28530 0 0 1 0 3 Ribosome 0.438707701845331 0.438623429787149 0.32756626 0 hPsi_site_22254 iPseU_CNN:0.32756626;iRNA_PseU:0 22255 chr12 6632016 6632016 1 + C A COAD 6632015 + 6631995 6632035 41 GGTGCAGGAGGTGATTGAATTCTTTGTGATGGTCTTCCAAT GGTGCAGGAGGTGATTGAATTATTTGTGATGGTCTTCCAAT < 41bp 0.538393355354453 0.86336274720939 0.37408862 0.58797604 prediction 0.649938783709874 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6632015 chr12:6632016 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_28531 0 0 1 0 1 Nucleus 0.438701395332403 0.438832936669713 0.17595208 0 hPsi_site_22255 iPseU_CNN:0.17595208;iRNA_PseU:0 22256 chr20 5166445 5166445 1 + C A UCEC 5166444 + 5166424 5166464 41 GGAAGGCTTCATTGGGGGCTTCTTTGCTACTGTGGTGTTTG GGAAGGCTTCATTGGGGGCTTATTTGCTACTGTGGTGTTTG < 41bp 0.457422640888544 0.824966883808312 0.31242153 0.34478763 prediction 0.649933767616623 Functional Gain - CDS2 ENSG00000101290 CDS Human protein_coding chr20:5166444 chr20:5166445 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28532 0 0 1 1 2 chromatin 0.438718593063125 0.438718592408938 0 0 hPsi_site_22256 iPseU_CNN:0;iRNA_PseU:0 22257 chr12 108956425 108956425 1 + G A rs11837563 108956424 + 108956404 108956444 41 GGCGGCTGGGGCTTTCCGTCTGAGGCGGGCGGCATCGGCTC GGCGGCTGGGGCTTTCCGTCTAAGGCGGGCGGCATCGGCTC < 41bp 0.428510588123996 0.824953241136296 0.39513472 0.6337076 prediction 0.649906482272592 Functional Gain - ISCU ENSG00000136003 CDS Human protein_coding chr12:108956424 chr12:108956425 synonymous SNV . 0 22 hPsi_associated_SNPs_28533 0 0 1 0 1 Cytosol 0.440179741834548 0.438711117232108 0.2674152 0 hPsi_site_22257 iPseU_CNN:0.2674152;iRNA_PseU:0 22258 chr9 129596084 129596084 1 + C A UCEC 129596083 + 129596063 129596103 41 AAAGCCGTATGAGTGTAATATCTGTGCAAAGAGGTTTATGT AAAGCCGTATGAGTGTAATATATGTGCAAAGAGGTTTATGT < 41bp 0.523150170324064 0.84810104453124 0.25357857 0.3058546 prediction 0.649901748414352 Functional Gain - ZBTB43 ENSG00000169155 CDS Human protein_coding chr9:129596083 chr9:129596084 synonymous SNV . 0 22 hPsi_associated_SNPs_28534 0 0 0 0 0 Cytosol 0.438718591623033 0.438693772278596 0 0 hPsi_site_22258 iPseU_CNN:0;iRNA_PseU:0 22259 chr19 13058751 13058751 1 + C A rs543623126 13058750 + 13058730 13058770 41 ACTCATCTATGCCGGCAAGATCTTGAGTGACGATGTCCCTA ACTCATCTATGCCGGCAAGATATTGAGTGACGATGTCCCTA < 41bp 0.458875864445161 0.824944039038744 0.3321973 0.39029735 prediction 0.649888078077488 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13058750 chr19:13058751 synonymous SNV . 0 22 hPsi_associated_SNPs_28535 0 0 1 0 2 Ribosome 0.438617743495936 0.438732845817403 0 0 hPsi_site_22259 iPseU_CNN:0;iRNA_PseU:0 22260 chr8 81399567 81399567 1 + G A rs593747 81399566 + 81399546 81399586 41 GCTGGAGGGGAAGGAGTTGATGCAGGACGGCGCGTCCCTGA GCTGGAGGGGAAGGAGTTGATACAGGACGGCGCGTCCCTGA < 41bp 0.44181755921127 0.824943358514836 0.36564702 0.6640996 prediction 0.649886717029672 Functional Gain - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399566 chr8:81399567 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28536 0 0 1 0 0 Endoplasmic reticulum 0.438734280510485 0.43873348998814 0.3281992 0 hPsi_site_22260 iPseU_CNN:0.3281992;iRNA_PseU:0 22261 chr15 80464532 80464532 1 + C A rs147016995 80464531 + 80464511 80464551 41 AAACAGATTGGGAGAGCCGATCCCCATTTCCAAGGCCCATG AAACAGATTGGGAGAGCCGATACCCATTTCCAAGGCCCATG < 41bp 0.448229170054355 0.824934563345697 0.30616045 0.80645895 prediction 0.649869126691395 Functional Gain - FAH ENSG00000103876 CDS Human protein_coding chr15:80464531 chr15:80464532 synonymous SNV . 0 22 hPsi_associated_SNPs_28537 0 0 1 0 2 Cytosol 0.438718592995102 0.438718592992736 0.6129179 0 hPsi_site_22261 iPseU_CNN:0.6129179;iRNA_PseU:0 22262 chr6 42993849 42993849 1 + C A UCEC 42993848 + 42993828 42993868 41 GTTTGACAAAACATACCAATTCTTGAATGACATCCGAGCGA GTTTGACAAAACATACCAATTATTGAATGACATCCGAGCGA < 41bp 0.541980092590496 0.866912005204643 0.3359942 0.49460122 prediction 0.649863825228294 Functional Gain - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42993848 chr6:42993849 nonsynonymous SNV 0.971 4 22 hPsi_associated_SNPs_28538 0 0 1 0 2 Ribosome 0.441045346396965 0.427511185911808 0 0 hPsi_site_22262 iPseU_CNN:0;iRNA_PseU:0 22263 chr7 143013423 143013423 1 + G A SKCM 143013422 + 143013402 143013442 41 TACGGACTGCCCTCTGAGAATGGGGGCCTCCAGCACAGGCT TACGGACTGCCCTCTGAGAATAGGGGCCTCCAGCACAGGCT < 41bp 0.418254414773495 0.824931467713855 0.26560122 0.34800434 prediction 0.649862935427711 Functional Gain - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143013422 chr7:143013423 nonsynonymous SNV 0.712 4 22 hPsi_associated_SNPs_28539 0 0 0 0 1 exosome 0.438718592995114 0.438718591594158 0 0 hPsi_site_22263 iPseU_CNN:0;iRNA_PseU:0 22264 chr1 173825828 173825828 1 + C A GBM 173825827 + 173825807 173825847 41 GATGTGAAAATGCTCTCCCATCTGCTCCAGGCTTTAGATTA GATGTGAAAATGCTCTCCCATATGCTCCAGGCTTTAGATTA < 41bp 0.468590605355056 0.824927298214534 0.29292494 0.38958746 prediction 0.649854596429068 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173825827 chr1:173825828 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28540 0 0 1 0 2 chromatin 0.438718645603733 0.438718127848978 0 0 hPsi_site_22264 iPseU_CNN:0;iRNA_PseU:0 22265 chr8 143603331 143603331 1 + G A LUSC 143603330 + 143603310 143603350 41 CCTGGGCCCCACACAGGTGGTGTGCACGCTGGTGGCCGCCT CCTGGGCCCCACACAGGTGGTATGCACGCTGGTGGCCGCCT < 41bp 0.416877270739272 0.824927134441631 0.22885886 0.43646193 prediction 0.649854268883262 Functional Gain - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143603330 chr8:143603331 synonymous SNV . 0 22 hPsi_associated_SNPs_28541 0 0 0 0 1 Nucleus 0.438735320178598 0.438716992895413 0 0 hPsi_site_22265 iPseU_CNN:0;iRNA_PseU:0 22266 chr7 825905 825905 1 + G A rs77553549 825904 + 825884 825924 41 AATATTTCATGAGATCTAATTGTGGTTGCCCCTATAGGTAG AATATTTCATGAGATCTAATTATGGTTGCCCCTATAGGTAG < 41bp 0.471968439463494 0.824926552060826 0.16468883 0.20165473 prediction 0.649853104121653 Functional Gain - DNAAF5 ENSG00000164818 UTR3 Human protein_coding chr7:825904 chr7:825905 . . 0 22 hPsi_associated_SNPs_28542 0 0 1 0 0 Ribosome 0.438716997011241 0.438718539430303 0 0 hPsi_site_22266 iPseU_CNN:0;iRNA_PseU:0 22267 chr11 6942558 6942558 1 + C A LUAD 6942557 + 6942537 6942577 41 TGGTAAAGAGGAAAACCATTTCTTTTTATGGGTGTATGACA TGGTAAAGAGGAAAACCATTTATTTTTATGGGTGTATGACA < 41bp 0.513581859963379 0.838506677597974 0.3175599 0.40160206 prediction 0.649849635269191 Functional Gain - OR2D3 ENSG00000178358 CDS Human protein_coding chr11:6942557 chr11:6942558 nonsynonymous SNV 0.393 4 22 hPsi_associated_SNPs_28543 0 0 0 0 0 unknown 0.438708171714057 0.439241161473742 0 0 hPsi_site_22267 iPseU_CNN:0;iRNA_PseU:0 22268 chrX 135991815 135991815 1 + G A rs374438797 135991814 + 135991794 135991834 41 GTGGCCCGCCCTCTCCGGGCTGAGGTGGCTGCTGAGGCTGG GTGGCCCGCCCTCTCCGGGCTAAGGTGGCTGCTGAGGCTGG < 41bp 0.505657353418826 0.830580534630537 0.36047846 0.601467 prediction 0.649846362423421 Functional Gain - RBMX;GPR101 ENSG00000234062 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:135991814 chrX:135991815 . . 0 22 hPsi_associated_SNPs_28544 0 0 0 0 0 unknown 0.438718593792698 0.439173414985713 0.202934 0 hPsi_site_22268 iPseU_CNN:0.202934;iRNA_PseU:0 22269 chr2 121043504 121043504 1 + C A UCS 121043503 + 121043483 121043523 41 AGTTATAGAAAGAAAGTGGTTCTTGATGGGGAAGAAGTTCA AGTTATAGAAAGAAAGTGGTTATTGATGGGGAAGAAGTTCA < 41bp 0.480359625013611 0.824922024745539 0.22498947 0.36746797 prediction 0.649844049491077 Functional Gain - RALB ENSG00000144118 CDS Human protein_coding chr2:121043503 chr2:121043504 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28545 0 0 1 0 1 Ribosome 0.438719264641348 0.438352230810497 0 0 hPsi_site_22269 iPseU_CNN:0;iRNA_PseU:0 22270 chr3 98188675 98188675 1 + C A LUSC 98188674 + 98188654 98188694 41 CCCCAAAATGTTAGAGAACTTCTTTTCTGAGAACAAAAGGA CCCCAAAATGTTAGAGAACTTATTTTCTGAGAACAAAAGGA < 41bp 0.499250341989033 0.824916940245026 0.29830423 0.28782576 prediction 0.649833880490053 Functional Gain - OR5K1 ENSG00000232382 CDS Human protein_coding chr3:98188674 chr3:98188675 nonsynonymous SNV 0.832 0 22 hPsi_associated_SNPs_28546 0 0 0 0 0 unknown 0.438537166783706 0.438718059952831 0 0 hPsi_site_22270 iPseU_CNN:0;iRNA_PseU:0 22271 chr3 128780850 128780850 1 + G A PAAD 128780849 + 128780829 128780869 41 ACGCAGAACCCCTGGCACTGTGACTGCAGCCTCACCTATCT ACGCAGAACCCCTGGCACTGTAACTGCAGCCTCACCTATCT < 41bp 0.573257574028722 0.898168938996705 0.20120141 0.41446576 prediction 0.649822729935966 Functional Gain - GP9 ENSG00000169704 CDS Human protein_coding chr3:128780849 chr3:128780850 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28547 0 0 0 0 0 Endoplasmic reticulum 0.438718592819714 0.438718592996009 0 0 hPsi_site_22271 iPseU_CNN:0;iRNA_PseU:0 22272 chr11 4608625 4608625 1 + C A LUAD 4608624 + 4608604 4608644 41 CCACTGAGTTGGATGGTGAGTCATCTACCTTTCTGTGGCTC CCACTGAGTTGGATGGTGAGTAATCTACCTTTCTGTGGCTC < 41bp 0.527970048664795 0.852881111129606 0.27160472 0.54383725 prediction 0.649822124929622 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608624 chr11:4608625 nonsynonymous SNV 0.975 1 22 hPsi_associated_SNPs_28548 0 0 0 0 0 unknown 0.438718592993551 0.4387185921317 0.0876745000000001 0 hPsi_site_22272 iPseU_CNN:0.0876745000000001;iRNA_PseU:0 22273 chr10 98743360 98743360 1 + C A UCEC 98743359 + 98743339 98743379 41 ACAACCTAAGACACGCTCATTCTCTGGGCTCCTTGGATGCT ACAACCTAAGACACGCTCATTATCTGGGCTCCTTGGATGCT < 41bp 0.53278016231031 0.857689162856145 0.31428772 0.3931784 prediction 0.649818001091671 Functional Gain - LCOR ENSG00000155640 CDS Human other chr10:98743359 chr10:98743360 nonsynonymous SNV 0.055 1 22 hPsi_associated_SNPs_28549 0 0 1 0 0 Ribosome 0.438724066881354 0.438733709496613 0 0 hPsi_site_22273 iPseU_CNN:0;iRNA_PseU:0 22274 chr16 4557818 4557818 1 + G A rs25686 4557817 + 4557797 4557837 41 TTTGTACTTCCCCATGGAGCTGCACCGGAAGGAGGCGCTGA TTTGTACTTCCCCATGGAGCTACACCGGAAGGAGGCGCTGA < 41bp 0.401999457949051 0.824908234491239 0.19962022 0.2860787 prediction 0.649816468982478 Functional Gain - HMOX2 ENSG00000103415 CDS Human protein_coding chr16:4557817 chr16:4557818 synonymous SNV . 0 22 hPsi_associated_SNPs_28550 0 0 1 0 0 Cytosol 0.435235867503029 0.438720290059149 0 0 hPsi_site_22274 iPseU_CNN:0;iRNA_PseU:0 22275 chr19 54697246 54697246 1 + G A rs2289145 54697245 + 54697225 54697265 41 AGACCTAGGGGATGTGGCTGTGTCGGCAGCAAGAGCCTTTC AGACCTAGGGGATGTGGCTGTATCGGCAGCAAGAGCCTTTC < 41bp 0.570188538966708 0.895089500946274 0.32432482 0.5992956 prediction 0.649801923959133 Functional Gain - TSEN34 ENSG00000170892 UTR3 Human protein_coding chr19:54697245 chr19:54697246 . . 0 22 hPsi_associated_SNPs_28551 2 0 1 0 0 Ribosome 0.435431779748539 0.438433035133448 0.1985912 0 hPsi_site_22275 iPseU_CNN:0.1985912;iRNA_PseU:0 22276 chr8 2026842 2026842 1 + G A PRAD 2026841 + 2026821 2026861 41 AGTAGGAACGAATAATTGGGTGCAGTGCAATGATGCACCGG AGTAGGAACGAATAATTGGGTACAGTGCAATGATGCACCGG < 41bp 0.42120152916465 0.824900858902131 0.25379395 0.61849475 prediction 0.649801717804262 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2026841 chr8:2026842 synonymous SNV . 0 22 hPsi_associated_SNPs_28552 0 0 1 0 1 exosome 0.438735786130507 0.43874457494914 0.2369895 0 hPsi_site_22276 iPseU_CNN:0.2369895;iRNA_PseU:0 22277 chr1 186375301 186375301 1 + G A STAD 186375300 + 186375280 186375320 41 ATGTTGTGTGATTATAAATTTGACGATGAGTCAGCTGAAGA ATGTTGTGTGATTATAAATTTAACGATGAGTCAGCTGAAGA < 41bp 0.423658844604088 0.824893732762141 0.29765105 0.3984197 prediction 0.649787465524281 Functional Gain - C1orf27 ENSG00000157181 CDS Human protein_coding chr1:186375300 chr1:186375301 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28553 0 0 1 0 2 chromatin 0.439630901952653 0.438857921531158 0 0 hPsi_site_22277 iPseU_CNN:0;iRNA_PseU:0 22278 chr1 32049108 32049108 1 + G T HNSC 32049107 + 32049087 32049127 41 TTCTGGGGCATGACCCTGGATGAGGGCATTCGCTACCGCCT TTCTGGGGCATGACCCTGGATTAGGGCATTCGCTACCGCCT < 41bp 0.506648763449876 0.83153590601257 0.4766769 0.8229934 prediction 0.649774285125388 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32049107 chr1:32049108 stopgain 1.000 0 22 hPsi_associated_SNPs_28554 0 0 1 0 2 Ribosome 0.438716392086119 0.43871859299726 0.6459868 0 hPsi_site_22278 iPseU_CNN:0.6459868;iRNA_PseU:0 22279 chr9 95840227 95840227 1 + G T COAD 95840226 + 95840206 95840246 41 TGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGCGTG TGTCCATGGCCTTCCTCACCTTCTGCCTCCTCAAGTGCGTG < 41bp 0.516295544112573 0.841172125582141 0.26224458 0.60567176 prediction 0.649753162939136 Functional Gain - SUSD3 ENSG00000157303 CDS Human protein_coding chr9:95840226 chr9:95840227 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28555 0 0 1 0 2 Endoplasmic reticulum 0.438719177405979 0.438718524055125 0.21134352 0 hPsi_site_22279 iPseU_CNN:0.21134352;iRNA_PseU:0 22280 chr12 57920648 57920648 1 + G A HNSC 57920647 + 57920627 57920667 41 GGAGGAGGACAACCTCCCCCTGAGCCCCTGCTACCCCCACC GGAGGAGGACAACCTCCCCCTAAGCCCCTGCTACCCCCACC < 41bp 0.533419090004909 0.858294556677678 0.20562285 0.35043734 prediction 0.649750933345539 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920647 chr12:57920648 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_28556 0 0 1 0 0 chromatin 0.438718595369791 0.438718592993765 0 0 hPsi_site_22280 iPseU_CNN:0;iRNA_PseU:0 Type 2 diabetes 22281 chr2 79350303 79350303 1 + G A LUSC 79350302 + 79350282 79350322 41 AAATGGAAGGATGTGCCTTGTGAAGACAAGTTCTCCTTTGT AAATGGAAGGATGTGCCTTGTAAAGACAAGTTCTCCTTTGT < 41bp 0.434915638700898 0.824874968302674 0.29618853 0.3795014 prediction 0.649749936605347 Functional Gain - REG1A ENSG00000115386 CDS Human protein_coding chr2:79350302 chr2:79350303 nonsynonymous SNV 0.044 0 22 hPsi_associated_SNPs_28557 0 0 0 0 1 Ribosome 0.438727128912298 0.438731746371251 0 0 hPsi_site_22281 iPseU_CNN:0;iRNA_PseU:0 22282 chr11 56468574 56468574 1 + C A UCEC 56468573 + 56468553 56468593 41 CAAGGGCTACCTCAAAGCCTTCTCCACATGCTCCTCCCACC CAAGGGCTACCTCAAAGCCTTATCCACATGCTCCTCCCACC < 41bp 0.52075813923836 0.845629599173997 0.27107376 0.65605915 prediction 0.649742919871275 Functional Gain - OR9G1;OR9G9 ENSG00000174914 CDS Human protein_coding chr11:56468573 chr11:56468574 nonsynonymous SNV 0.046 2 22 hPsi_associated_SNPs_28558 0 0 0 0 0 unknown 0.438718642060306 0.438718593313838 0.3121183 0 hPsi_site_22282 iPseU_CNN:0.3121183;iRNA_PseU:0 22283 chr1 27100139 27100139 1 + C A BLCA 27100138 + 27100118 27100158 41 CACAGCCGAATCTCATGCCTTCCAACCCAGACTCGGGGATG CACAGCCGAATCTCATGCCTTACAACCCAGACTCGGGGATG < 41bp 0.543022607894916 0.867892613788073 0.44012976 0.8164108 prediction 0.649740011786313 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27100138 chr1:27100139 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28559 0 0 1 0 2 Nucleus 0.438719246929063 0.438628183244868 0.6328216 0 hPsi_site_22283 iPseU_CNN:0.6328216;iRNA_PseU:0 22284 chr15 22836136 22836136 1 + C A UCEC 22836135 + 22836115 22836155 41 AAGAGATTAACGGAGGAATTTCTAAATGCACCACTTCCCAG AAGAGATTAACGGAGGAATTTATAAATGCACCACTTCCCAG < 41bp 0.475915919113441 0.824862212630349 0.3398437 0.60256726 prediction 0.649724425260699 Functional Gain - TUBGCP5 ENSG00000153575 CDS Human other chr15:22836135 chr15:22836136 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28560 0 0 1 0 2 chromatin 0.438722219986074 0.438718591417551 0.20513452 0 hPsi_site_22284 iPseU_CNN:0.20513452;iRNA_PseU:0 22285 chr21 38862744 38862744 1 + C A UCEC 38862743 + 38862723 38862763 41 AGATAGTTGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGG AGATAGTTGACTTTGGCAGTTATTGTCAGTTGGGGCAGAGG < 41bp 0.472585206174943 0.824861940823708 0.33613697 0.50718486 prediction 0.649723881647417 Functional Gain - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38862743 chr21:38862744 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28561 2 0 1 0 0 Cytosol 0.438718592995304 0.4387185929951 0.0143697199999999 0 hPsi_site_22285 iPseU_CNN:0.0143697199999999;iRNA_PseU:0 22286 chr9 32634582 32634582 1 + C T HNSC 32634583 - 32634563 32634603 41 CGCTGATGATGAAATCACGATGATGGTTCCTGTGGAGTCCA CGCTGATGATGAAATCACGATAATGGTTCCTGTGGAGTCCA < 41bp 0.432055205675359 0.824859429106387 0.22610018 0.7586077 prediction 0.649718858212774 Functional Gain - TAF1L ENSG00000122728 CDS Human protein_coding chr9:32634583 chr9:32634582 nonsynonymous SNV 0.156 1 22 hPsi_associated_SNPs_28562 0 0 0 0 0 exosome 0.438716306465333 0.438687066276221 0.5172154 0 hPsi_site_22286 iPseU_CNN:0.5172154;iRNA_PseU:0 22287 chr5 131607859 131607859 1 + G A STAD 131607858 + 131607838 131607878 41 GAGCCACGCCAAGGCGCGCGTGAAGCCGCCCGAGGGCTACG GAGCCACGCCAAGGCGCGCGTAAAGCCGCCCGAGGGCTACG < 41bp 0.574646297051057 0.899498144369946 0.25705492 0.2919194 prediction 0.649703694637778 Functional Gain - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607858 chr5:131607859 synonymous SNV . 0 22 hPsi_associated_SNPs_28563 0 0 1 0 0 chromatin 0.438719691039402 0.438718592996166 0 0 hPsi_site_22287 iPseU_CNN:0;iRNA_PseU:0 22288 chr6 132873990 132873990 1 + G A LUAD 132873989 + 132873969 132874009 41 ATTTGGAAATCTCTTAGTAATGACTTCTGTTCTTCATTTTA ATTTGGAAATCTCTTAGTAATAACTTCTGTTCTTCATTTTA < 41bp 0.550140978216294 0.874992248574155 0.2759512 0.34719476 prediction 0.649702540715722 Functional Gain - TAAR8 ENSG00000146385 CDS Human protein_coding chr6:132873989 chr6:132873990 nonsynonymous SNV 0.109 0 22 hPsi_associated_SNPs_28564 0 0 0 0 0 unknown 0.438718579081001 0.438718275824087 0 0 hPsi_site_22288 iPseU_CNN:0;iRNA_PseU:0 22289 chr15 42652223 42652223 1 + C A UCEC 42652222 + 42652202 42652242 41 AAATGTCTAGAAAAGAAAGTTCTTTATGTGGACCCTGAGTT AAATGTCTAGAAAAGAAAGTTATTTATGTGGACCCTGAGTT < 41bp 0.505388028170806 0.830238130104735 0.39160618 0.4136517 prediction 0.649700203867859 Functional Gain - CAPN3 ENSG00000092529 CDS Human protein_coding chr15:42652222 chr15:42652223 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28565 0 0 0 0 1 Cytosol 0.438571410575941 0.438717069280652 0 0 hPsi_site_22289 iPseU_CNN:0;iRNA_PseU:0 22290 chr3 46415129 46415129 1 + C A COAD 46415128 + 46415108 46415148 41 ACCATCATGATTGTTTATTTTCTCTTCTGGGCTCCCTACAA ACCATCATGATTGTTTATTTTATCTTCTGGGCTCCCTACAA < 41bp 0.5375329117267 0.862382954766286 0.3502851 0.30556977 prediction 0.649700086079172 Functional Gain - CCR5 ENSG00000160791 CDS Human protein_coding chr3:46415128 chr3:46415129 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_28566 0 0 0 0 0 exosome 0.438718592786754 0.438727512184834 0 0 hPsi_site_22290 iPseU_CNN:0;iRNA_PseU:0 22291 chr1 248112982 248112982 1 + G A LUAD 248112981 + 248112961 248113001 41 ACAGAGGACAAGGTTCTGGCTGTCTTCTACACCATCCTCAC ACAGAGGACAAGGTTCTGGCTATCTTCTACACCATCCTCAC < 41bp 0.557890024447226 0.882736098105107 0.3050201 0.4759621 prediction 0.649692147315761 Functional Gain - OR2L8 ENSG00000196936 CDS Human other chr1:248112981 chr1:248112982 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_28567 0 0 0 0 0 unknown 0.438725491964166 0.438772714736113 0 0 hPsi_site_22291 iPseU_CNN:0;iRNA_PseU:0 22292 chr17 7415174 7415174 1 + G T KIRC 7415173 + 7415153 7415193 41 GAAGGCCCTGGAGCGGGAGCTGTACCACGTCATCTCCTTTG GAAGGCCCTGGAGCGGGAGCTTTACCACGTCATCTCCTTTG < 41bp 0.520345772928374 0.84518621791196 0.47040734 0.4567791 prediction 0.649680889967171 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7415173 chr17:7415174 synonymous SNV . 0 22 hPsi_associated_SNPs_28568 0 0 1 0 1 Nucleus 0.438755535361844 0.438723965989429 0 0 hPsi_site_22292 iPseU_CNN:0;iRNA_PseU:0 22293 chr7 141478975 141478975 1 + G A MESO 141478974 + 141478954 141478994 41 GGAAGCTCATGTAGGTGCTATGAAGCTGATGGTCTATTTCC GGAAGCTCATGTAGGTGCTATAAAGCTGATGGTCTATTTCC < 41bp 0.44759606121004 0.824835011067105 0.29480582 0.33689618 prediction 0.64967002213421 Functional Gain - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478974 chr7:141478975 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28569 0 0 1 0 0 nucleoplasm 0.438724899215281 0.438268411159123 0 0 hPsi_site_22293 iPseU_CNN:0;iRNA_PseU:0 22294 chr10 135025014 135025014 1 + G A BLCA 135025013 + 135024993 135025033 41 TGGGTGGAGGACTGCTACGCTGTGGACTTCCCTCGGAACAG TGGGTGGAGGACTGCTACGCTATGGACTTCCCTCGGAACAG < 41bp 0.577431538461721 0.902260986913219 0.3378667 0.57712585 prediction 0.649658896902995 Functional Gain - KNDC1 ENSG00000171798 CDS Human protein_coding chr10:135025013 chr10:135025014 nonsynonymous SNV 0.793 1 22 hPsi_associated_SNPs_28570 0 0 0 0 2 Endoplasmic reticulum 0.438499031883345 0.438697988338979 0.1542517 0 hPsi_site_22294 iPseU_CNN:0.1542517;iRNA_PseU:0 22295 chr17 7251259 7251259 1 + C A COAD 7251258 + 7251238 7251278 41 CAGGAGCCTTGGTGTTCACTTCTCCAAAGTCCGGTCTCTGA CAGGAGCCTTGGTGTTCACTTATCCAAAGTCCGGTCTCTGA < 41bp 0.549431886101024 0.874259583209293 0.3045609 0.49253795 prediction 0.649655394216536 Functional Gain - ACAP1 ENSG00000072818 CDS Human protein_coding chr17:7251258 chr17:7251259 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28571 0 0 0 0 2 nucleus 0.438719866780646 0.438742880558002 0 0 hPsi_site_22295 iPseU_CNN:0;iRNA_PseU:0 22296 chr10 135125300 135125300 1 + C T UCEC 135125301 - 135125281 135125321 41 CCTGCCGGTGCAGGGGAGGCTGCCACAGGCTCAGAGCAGAT CCTGCCGGTGCAGGGGAGGCTACCACAGGCTCAGAGCAGAT < 41bp 0.417890935711261 0.824824875662068 0.161199 0.40619022 prediction 0.649649751324136 Functional Gain - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135125301 chr10:135125300 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_28572 0 0 0 0 0 Ribosome 0.438719042296894 0.438718848319368 0 0 hPsi_site_22296 iPseU_CNN:0;iRNA_PseU:0 22297 chr6 131900335 131900335 1 + C A STAD 131900334 + 131900314 131900354 41 AAATTGTGAAGAATCCAAGGTCTGTGGGAAAAGCAAGCGAG AAATTGTGAAGAATCCAAGGTATGTGGGAAAAGCAAGCGAG < 41bp 0.456995960173714 0.824822308930204 0.24559453 0.29969907 prediction 0.649644617860408 Functional Gain - ARG1 ENSG00000118520 CDS Human protein_coding chr6:131900334 chr6:131900335 nonsynonymous SNV 0.987 0 22 hPsi_associated_SNPs_28573 0 0 0 0 2 exosome 0.438718666358509 0.438721750399352 0 0 hPsi_site_22297 iPseU_CNN:0;iRNA_PseU:0 22298 chr11 55322361 55322361 1 + C A UCEC 55322360 + 55322340 55322380 41 TTCTATCATGAACAGGAGGCTCTGTGGCATTCTGATGGGGG TTCTATCATGAACAGGAGGCTATGTGGCATTCTGATGGGGG < 41bp 0.523371395384498 0.848187051187855 0.18432334 0.26953924 prediction 0.649631311606713 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322360 chr11:55322361 synonymous SNV . 0 22 hPsi_associated_SNPs_28574 0 0 0 0 0 unknown 0.438720334512966 0.438702482123489 0 0 hPsi_site_22298 iPseU_CNN:0;iRNA_PseU:0 22299 chr14 20973886 20973886 1 + G A rs546445935 20973885 + 20973865 20973905 41 CCGAGATTGCAGCCTCTGCCTGGCCGCCACCCCGTCTGGGA CCGAGATTGCAGCCTCTGCCTAGCCGCCACCCCGTCTGGGA < 41bp 0.480848609409534 0.82481474963124 0.17191991 0.35169813 prediction 0.64962949926248 Functional Gain - PNP;RNASE10 ENSG00000182545 UTR5 Human protein_coding chr14:20973885 chr14:20973886 . . 0 22 hPsi_associated_SNPs_28575 0 0 0 0 0 unknown 0.438718650585699 0.438717734364296 0 0 hPsi_site_22299 iPseU_CNN:0;iRNA_PseU:0 22300 chr5 176733449 176733449 1 + G T CESC 176733448 + 176733428 176733468 41 GCCCCTTCCAAAACACTTGTTGAGACAGCCAAGGAAGCCAA GCCCCTTCCAAAACACTTGTTTAGACAGCCAAGGAAGCCAA < 41bp 0.505021674165039 0.829833544925023 0.27570802 0.6919799 prediction 0.64962374151997 Functional Gain - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176733448 chr5:176733449 stopgain 1.000 1 22 hPsi_associated_SNPs_28576 0 0 1 0 1 Cytosol 0.438695351813959 0.438717073161926 0.3839598 0 hPsi_site_22300 iPseU_CNN:0.3839598;iRNA_PseU:0 22301 chr20 47896871 47896871 1 + G A LUSC 47896870 + 47896850 47896890 41 CTTCCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGA CTTCCTGCTGGCATATATGATAACTTAGCTTTTTTCCCCGA < 41bp 0.468957230305812 0.824807329998307 0.28469154 0.3034153 prediction 0.649614659996613 Functional Gain - SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896870 chr20:47896871 . . 0 22 hPsi_associated_SNPs_28577 0 0 1 0 0 unknown 0.438718044768778 0.438717216940947 0 0 hPsi_site_22301 iPseU_CNN:0;iRNA_PseU:0 22302 chr16 23767007 23767007 1 + G A BLCA 23767006 + 23766986 23767026 41 CCAAGCCAGCCTGCTCCGCCTGCACCACCGGTTCCGGGCAC CCAAGCCAGCCTGCTCCGCCTACACCACCGGTTCCGGGCAC < 41bp 0.479164337658166 0.824802893520843 0.23668343 0.34644687 prediction 0.649605787041686 Functional Gain - CHP2 ENSG00000166869 CDS Human protein_coding chr16:23767006 chr16:23767007 synonymous SNV . 0 22 hPsi_associated_SNPs_28578 0 0 0 0 2 nucleolus 0.438667899318326 0.438761545565458 0 0 hPsi_site_22302 iPseU_CNN:0;iRNA_PseU:0 22303 chr3 98001900 98001900 1 + G A LUAD 98001899 + 98001879 98001919 41 CTGATTGCTCTTATCTGGAATGACCCACAACTTCACATCCC CTGATTGCTCTTATCTGGAATAACCCACAACTTCACATCCC < 41bp 0.445046632840265 0.824792981614876 0.19532144 0.26178476 prediction 0.649585963229751 Functional Gain - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98001899 chr3:98001900 nonsynonymous SNV 0.252 2 22 hPsi_associated_SNPs_28579 0 0 0 0 0 unknown 0.437370346772517 0.438698691894058 0 0 hPsi_site_22303 iPseU_CNN:0;iRNA_PseU:0 22304 chr2 203847107 203847107 1 + C A UCEC 203847106 + 203847086 203847126 41 GAAGGAACTGTTCATCGGATTCTGTTGGGAGATGTGCAGAC GAAGGAACTGTTCATCGGATTATGTTGGGAGATGTGCAGAC < 41bp 0.476838356591944 0.824791631170062 0.4545842 0.6655904 prediction 0.649583262340124 Functional Gain - CARF ENSG00000138380 CDS Human protein_coding chr2:203847106 chr2:203847107 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_28580 0 0 0 0 1 nucleus 0.438701740247571 0.43849445994293 0.3311808 0 hPsi_site_22304 iPseU_CNN:0.3311808;iRNA_PseU:0 22305 chr4 9784610 9784610 1 + C A BRCA 9784609 + 9784589 9784629 41 CTTCATCCTTAACTGCATGGTCCCTTTCTGCAGTGGACACC CTTCATCCTTAACTGCATGGTACCTTTCTGCAGTGGACACC < 41bp 0.532841968192414 0.857632542523491 0.20479408 0.6879296 prediction 0.649581148662155 Functional Gain - DRD5 ENSG00000169676 CDS Human protein_coding chr4:9784609 chr4:9784610 synonymous SNV . 0 22 hPsi_associated_SNPs_28581 0 0 0 0 0 unknown 0.4387185894496 0.438718595574562 0.3758592 0 hPsi_site_22305 iPseU_CNN:0.3758592;iRNA_PseU:0 22306 chr19 4498824 4498824 1 + G A COAD 4498823 + 4498803 4498843 41 CCCTGCAGGACGTGAAGAGGTGCCTGAATGCCCTAGAGGAG CCCTGCAGGACGTGAAGAGGTACCTGAATGCCCTAGAGGAG < 41bp 0.580152142216602 0.904942101037097 0.26470882 0.8613475 prediction 0.649579917640989 Functional Gain - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4498823 chr19:4498824 nonsynonymous SNV 0.809 1 22 hPsi_associated_SNPs_28582 0 0 1 0 2 unknown 0.438718592929291 0.438716718734767 0.722695 0 hPsi_site_22306 iPseU_CNN:0.722695;iRNA_PseU:0 22307 chr1 159277591 159277591 1 + C A CESC 159277590 + 159277570 159277610 41 ATCCCATTGTTGGTGGTGATTCTGTTTGCTGTGGACACAGG ATCCCATTGTTGGTGGTGATTATGTTTGCTGTGGACACAGG < 41bp 0.484243634871703 0.824778772782234 0.19185746 0.24436843 prediction 0.649557545564468 Functional Gain - FCER1A ENSG00000179639 CDS Human protein_coding chr1:159277590 chr1:159277591 nonsynonymous SNV 0.863 1 22 hPsi_associated_SNPs_28583 0 0 0 0 1 exosome 0.429112837599449 0.438717081195144 0 0 hPsi_site_22307 iPseU_CNN:0;iRNA_PseU:0 22308 chr9 99220728 99220728 1 + G A OV 99220727 + 99220707 99220747 41 CAGCCGTGGGCCGGAGGGGATGCTCGAAAGAGCTGAGCGGA CAGCCGTGGGCCGGAGGGGATACTCGAAAGAGCTGAGCGGA < 41bp 0.393609199084271 0.824752801691951 0.25786477 0.60905135 prediction 0.649505603383902 Functional Gain - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99220727 chr9:99220728 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_28584 0 0 1 0 2 chromatin 0.438718555455212 0.438718384793125 0.2181027 0 hPsi_site_22308 iPseU_CNN:0.2181027;iRNA_PseU:0 22309 chr19 45911714 45911714 1 + C T BLCA 45911715 - 45911695 45911735 41 AGCAGGTTGGGGGCCAAGGCTGACCTAGGCCCTGTGACTGG AGCAGGTTGGGGGCCAAGGCTAACCTAGGCCCTGTGACTGG < 41bp 0.531564209327187 0.856316359755907 0.23875791 0.3039968 prediction 0.649504300857441 Functional Gain - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45911715 chr19:45911714 nonsynonymous SNV 0.229 1 22 hPsi_associated_SNPs_28585 0 0 1 0 0 Ribosome 0.438718592995025 0.438718592995102 0 0 hPsi_site_22309 iPseU_CNN:0;iRNA_PseU:0 22310 chr16 5127458 5127458 1 + C A HNSC 5127457 + 5127437 5127477 41 TCTTTTCAGGTACGAGAAGTTCTTTGGGCGCCTGTCCCACC TCTTTTCAGGTACGAGAAGTTATTTGGGCGCCTGTCCCACC < 41bp 0.44839626174662 0.824751816973985 0.6813829 0.9338789 prediction 0.64950363394797 Functional Gain - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127457 chr16:5127458 nonsynonymous SNV 0.520 1 22 hPsi_associated_SNPs_28586 0 0 1 0 2 Ribosome 0.438825384713778 0.438719525992139 0.504992 0 hPsi_site_22310 iPseU_CNN:0.504992;iRNA_PseU:0 22311 chr11 48510904 48510904 1 + G A ESCA 48510903 + 48510883 48510923 41 ATCCCTTATTGAAACTGGTCTGCACTGACACCCATGCTATT ATCCCTTATTGAAACTGGTCTACACTGACACCCATGCTATT < 41bp 0.433633366057381 0.824751112492793 0.2647258 0.4559904 prediction 0.649502224985586 Functional Gain - OR4A47 ENSG00000237388 CDS Human protein_coding chr11:48510903 chr11:48510904 nonsynonymous SNV 0.048 4 22 hPsi_associated_SNPs_28587 0 0 0 0 0 unknown 0.438718509135459 0.438713995897113 0 0 hPsi_site_22311 iPseU_CNN:0;iRNA_PseU:0 22312 chr11 67250680 67250680 1 + G A BLCA 67250679 + 67250659 67250699 41 GGACGGGATCCAAAAACGTGTGATACAGGAAGGCCGAGGAG GGACGGGATCCAAAAACGTGTAATACAGGAAGGCCGAGGAG < 41bp 0.568329137275875 0.893075790597174 0.19146746 0.43496573 prediction 0.649493306642599 Functional Gain - AIP ENSG00000110711 CDS Human protein_coding chr11:67250679 chr11:67250680 synonymous SNV . 0 22 hPsi_associated_SNPs_28588 0 0 1 0 1 Ribosome 0.438718592994999 0.438718592995102 0 0 hPsi_site_22312 iPseU_CNN:0;iRNA_PseU:0 22313 chr11 4510264 4510264 1 + G A LUAD 4510263 + 4510243 4510283 41 CTCTGGCCCTGCTAGGCAACTGTACCCTTCTCTTCATTATC CTCTGGCCCTGCTAGGCAACTATACCCTTCTCTTCATTATC < 41bp 0.561315690549841 0.886060318615017 0.30723464 0.5101835 prediction 0.649489256130353 Functional Gain - OR52K1 ENSG00000196778 CDS Human protein_coding chr11:4510263 chr11:4510264 nonsynonymous SNV 0.201 2 22 hPsi_associated_SNPs_28589 0 0 0 0 0 exosome 0.438718592994954 0.438718592995103 0.020367 0 hPsi_site_22313 iPseU_CNN:0.020367;iRNA_PseU:0 22314 chrX 78426604 78426604 1 + C A LUAD 78426603 + 78426583 78426623 41 ACTGTCATTCTTGTGCCAGGTCTCATAGGGAATATATTAGC ACTGTCATTCTTGTGCCAGGTATCATAGGGAATATATTAGC < 41bp 0.490523017422035 0.824744310702488 0.34942102 0.7487911 prediction 0.649488621404975 Functional Gain - GPR174 ENSG00000147138 CDS Human protein_coding chrX:78426603 chrX:78426604 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_28590 0 0 0 0 0 exosome 0.43968579546041 0.438697265013676 0.4975822 0 hPsi_site_22314 iPseU_CNN:0.4975822;iRNA_PseU:0 22315 chr14 76549897 76549897 1 + G A GBM 76549896 + 76549876 76549916 41 CAGACGGAGAAGGAGGACCCTGCGGGGCAGGCCAGGCACAC CAGACGGAGAAGGAGGACCCTACGGGGCAGGCCAGGCACAC < 41bp 0.405063235393203 0.824741725753497 0.26387197 0.35710707 prediction 0.649483451506994 Functional Gain - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76549896 chr14:76549897 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28591 0 0 0 0 2 Ribosome 0.438721638436884 0.438719495847552 0 0 hPsi_site_22315 iPseU_CNN:0;iRNA_PseU:0 22316 chr21 43546526 43546526 1 + G A STAD 43546525 + 43546505 43546545 41 GGAGGGCATCATCCACCACCTGAAGATCCTGAGCCCCATCT GGAGGGCATCATCCACCACCTAAAGATCCTGAGCCCCATCT < 41bp 0.415762916807629 0.824741674557219 0.25160646 0.29633236 prediction 0.649483349114439 Functional Gain - UMODL1 ENSG00000177398 CDS Human protein_coding chr21:43546525 chr21:43546526 synonymous SNV . 0 22 hPsi_associated_SNPs_28592 0 0 0 0 2 exosome 0.438718646831451 0.438718592947051 0 0 hPsi_site_22316 iPseU_CNN:0;iRNA_PseU:0 22317 chr7 107114633 107114633 1 + C A UCEC 107114632 + 107114612 107114652 41 ATCCGTTAAGCTTTCAAGTGTCTCTCACCGGATTTCTTATG ATCCGTTAAGCTTTCAAGTGTATCTCACCGGATTTCTTATG < 41bp 0.520213365234298 0.844950797878699 0.29407954 0.5567343 prediction 0.649474865288802 Functional Gain - GPR22 ENSG00000172209 CDS Human protein_coding chr7:107114632 chr7:107114633 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28593 0 0 0 0 0 nucleus 0.438718592995102 0.438718592990812 0.1134686 0 hPsi_site_22317 iPseU_CNN:0.1134686;iRNA_PseU:0 22318 chr11 85630436 85630436 1 + G A LUAD 85630435 + 85630415 85630455 41 GGGAGTGAAGCTTATGAGTGTGGAGAGCAAGAAAATGCCCA GGGAGTGAAGCTTATGAGTGTAGAGAGCAAGAAAATGCCCA < 41bp 0.421179394318614 0.824727249397102 0.30932987 0.6513501 prediction 0.649454498794203 Functional Gain - CCDC83 ENSG00000150676 CDS Human protein_coding chr11:85630435 chr11:85630436 synonymous SNV . 0 22 hPsi_associated_SNPs_28594 0 0 0 0 1 exosome 0.438718520273217 0.446009257362524 0.3027002 0 hPsi_site_22318 iPseU_CNN:0.3027002;iRNA_PseU:0 22319 chr3 98189177 98189177 1 + G A LUSC 98189176 + 98189156 98189196 41 TTGTCAGTTTCATTATTCTATGGATCTCTTTTCTTCATGTA TTGTCAGTTTCATTATTCTATAGATCTCTTTTCTTCATGTA < 41bp 0.544078115451307 0.868804622919771 0.22464105 0.30008596 prediction 0.649453014936927 Functional Gain - OR5K1 ENSG00000232382 CDS Human protein_coding chr3:98189176 chr3:98189177 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_28595 0 0 0 0 0 unknown 0.44030583767075 0.439061967078926 0 0 hPsi_site_22319 iPseU_CNN:0;iRNA_PseU:0 22320 chr7 44622286 44622286 1 + G A rs217358 44622285 + 44622265 44622305 41 CTGTGATGTTTTGCTTTGCGTGTCCACCTATCTGACTCGTA CTGTGATGTTTTGCTTTGCGTATCCACCTATCTGACTCGTA < 41bp 0.447319367867988 0.824725884665732 0.2693798 0.42590216 prediction 0.649451769331463 Functional Gain - TMED4 ENSG00000158604 upstream Human protein_coding chr7:44622285 chr7:44622286 . . 0 22 hPsi_associated_SNPs_28596 0 1 1 0 0 Endoplasmic reticulum 0.438795507303368 0.439673352901251 0 0 hPsi_site_22320 iPseU_CNN:0;iRNA_PseU:0 22321 chr17 25635562 25635562 1 + G A rs116087866 25635561 + 25635541 25635581 41 ATGTGGTTTAACATCCTTGTTGTTTGCCAAAGAAATTTCAT ATGTGGTTTAACATCCTTGTTATTTGCCAAAGAAATTTCAT < 41bp 0.451321442626439 0.824725328687036 0.25019264 0.3854735 prediction 0.649450657374071 Functional Gain - WSB1 ENSG00000109046 UTR3 Human protein_coding chr17:25635561 chr17:25635562 . . 0 22 hPsi_associated_SNPs_28597 0 0 1 4 0 Cytosol 0.428693322961181 0.43862519496472 0 0 hPsi_site_22321 iPseU_CNN:0;iRNA_PseU:0 22322 chr19 3155902 3155902 1 + G A rs2074865 3155901 + 3155881 3155921 41 CGTGATCGCCCTCATCTACCTGGCCTCACTGAGTGAATACG CGTGATCGCCCTCATCTACCTAGCCTCACTGAGTGAATACG < 41bp 0.408302704407866 0.824719331819789 0.116629034 0.22487631 prediction 0.649438663639578 Functional Gain - GNA15 ENSG00000060558 CDS Human protein_coding chr19:3155901 chr19:3155902 synonymous SNV . 0 22 hPsi_associated_SNPs_28598 0 0 0 0 2 exosome 0.438718592983261 0.438718592645313 0 0 hPsi_site_22322 iPseU_CNN:0;iRNA_PseU:0 22323 chr2 68400495 68400495 1 + G A LUAD 68400494 + 68400474 68400514 41 TTCAGGAAAGTTCACATCCTTGGCTCCTTCCAAAATATCAA TTCAGGAAAGTTCACATCCTTAGCTCCTTCCAAAATATCAA < 41bp 0.568455912783116 0.893173707611611 0.14737612 0.26767132 prediction 0.649435589656989 Functional Gain - PNO1 ENSG00000115946 CDS Human protein_coding chr2:68400494 chr2:68400495 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28599 0 0 1 0 2 Ribosome 0.438718596255027 0.438718592995102 0 0 hPsi_site_22323 iPseU_CNN:0;iRNA_PseU:0 22324 chr5 36677170 36677170 1 + C A LUAD 36677169 + 36677149 36677189 41 CAATGCCCTGGGTCTAGTTGTCTTCTCCATGTGCTTCGGTT CAATGCCCTGGGTCTAGTTGTATTCTCCATGTGCTTCGGTT < 41bp 0.547157563196458 0.871874150629252 0.5737869 0.71405077 prediction 0.649433174865587 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36677169 chr5:36677170 synonymous SNV . 0 22 hPsi_associated_SNPs_28600 0 0 1 0 0 Endoplasmic reticulum 0.438718472622655 0.438675031068008 0.28052774 0 hPsi_site_22324 iPseU_CNN:0.28052774;iRNA_PseU:0 22325 chr11 57571149 57571149 1 + G A KIRC 57571148 + 57571128 57571168 41 AAAATGGAGATTGTGGACCATGCACTGCATGCCTTGACAGA AAAATGGAGATTGTGGACCATACACTGCATGCCTTGACAGA < 41bp 0.416908064545875 0.824714623009439 0.20815215 0.4514866 prediction 0.649429246018877 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57571148 chr11:57571149 nonsynonymous SNV 0.985 4 22 hPsi_associated_SNPs_28601 0 0 1 0 1 Nucleus 0.438739074628298 0.438727302714617 0 0 hPsi_site_22325 iPseU_CNN:0;iRNA_PseU:0 22326 chr17 27061884 27061884 1 + G A LGG 27061883 + 27061863 27061903 41 CGTGCAGATCCTGCTTGCACTGCATCATGTGCACACCCACC CGTGCAGATCCTGCTTGCACTACATCATGTGCACACCCACC < 41bp 0.403332734812242 0.82471206951879 0.33697397 0.63679016 prediction 0.64942413903758 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27061883 chr17:27061884 synonymous SNV . 0 22 hPsi_associated_SNPs_28602 0 0 1 0 1 Nucleus 0.443206476507174 0.436653613270594 0.27358032 0 hPsi_site_22326 iPseU_CNN:0.27358032;iRNA_PseU:0 22327 chr11 1619335 1619335 1 + C T LIHC 1619336 - 1619316 1619356 41 GTGGGGGCTGCAGCTCCAGCTGTGGGGGATGTGGCTCCAGA GTGGGGGCTGCAGCTCCAGCTATGGGGGATGTGGCTCCAGA < 41bp 0.562112832485166 0.886816708711057 0.3302166 0.6050687 prediction 0.649407752451783 Functional Gain - KRTAP5-2 ENSG00000205867 CDS Human protein_coding chr11:1619336 chr11:1619335 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_28603 0 0 0 0 0 exosome 0.43871863118009 0.438718679886747 0.2101374 0 hPsi_site_22327 iPseU_CNN:0.2101374;iRNA_PseU:0 22328 chr1 158725283 158725283 1 + G A SKCM 158725282 + 158725262 158725302 41 TACATTCCTAGTGGTCATTGTGGATGCCATCCATGCAGCGG TACATTCCTAGTGGTCATTGTAGATGCCATCCATGCAGCGG < 41bp 0.559891270567204 0.884594805875993 0.4774552 0.7501971 prediction 0.649407070617577 Functional Gain - OR6K6 ENSG00000180433 CDS Human protein_coding chr1:158725282 chr1:158725283 synonymous SNV . 0 22 hPsi_associated_SNPs_28604 0 0 0 0 0 unknown 0.438718592993142 0.438715073766003 0.5003942 0 hPsi_site_22328 iPseU_CNN:0.5003942;iRNA_PseU:0 22329 chr22 49103622 49103622 1 + G T LUAD 49103621 + 49103601 49103641 41 TCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGG TCAACCGGTCAGGCTGGACGTTCACGCAGCCCGGCGGGAGG < 41bp 0.496643173486883 0.824701094469881 0.1753062 0.28289625 prediction 0.649402188939763 Functional Gain - FAM19A5 ENSG00000219438 CDS Human protein_coding chr22:49103621 chr22:49103622 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28605 0 0 1 0 2 membrane 0.438718590262385 0.438715927149308 0 0 hPsi_site_22329 iPseU_CNN:0;iRNA_PseU:0 22330 chr11 56756518 56756518 1 + G A SKCM 56756517 + 56756497 56756537 41 ACCTCCATAATGGGTAATAGTGGAATAATCTTACTCATCAA ACCTCCATAATGGGTAATAGTAGAATAATCTTACTCATCAA < 41bp 0.457575636076452 0.824696090599476 0.31554663 0.4297546 prediction 0.649392181198952 Functional Gain - OR5AK2 ENSG00000181273 CDS Human protein_coding chr11:56756517 chr11:56756518 nonsynonymous SNV 0.506 3 22 hPsi_associated_SNPs_28606 0 0 0 0 0 unknown 0.438718592995102 0.438718216104261 0 0 hPsi_site_22330 iPseU_CNN:0;iRNA_PseU:0 22331 chr12 58174307 58174307 1 + G A STAD 58174306 + 58174286 58174326 41 TCCAAGATGAGAAAGGAGCATGGGACAGAGAGCTTCTTTCA TCCAAGATGAGAAAGGAGCATAGGACAGAGAGCTTCTTTCA < 41bp 0.417264850715277 0.82468849197115 0.2903003 0.3837079 prediction 0.6493769839423 Functional Gain - EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58174306 chr12:58174307 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_28607 0 0 1 0 0 unknown 0.438720197704098 0.438660193449885 0 0 hPsi_site_22331 iPseU_CNN:0;iRNA_PseU:0 22332 chr1 10460560 10460560 1 + G A LUSC 10460559 + 10460539 10460579 41 GAAAGAGATGGTCTCCAAGCTGAAGAAGCCCCGGCGGATCA GAAAGAGATGGTCTCCAAGCTAAAGAAGCCCCGGCGGATCA < 41bp 0.577492523023555 0.902177125909375 0.2656013 0.45366398 prediction 0.64936920577164 Functional Gain - PGD ENSG00000142657 CDS Human protein_coding chr1:10460559 chr1:10460560 synonymous SNV . 0 22 hPsi_associated_SNPs_28608 0 0 1 0 1 Cytosol 0.438718592937799 0.438718754243239 0 0 hPsi_site_22332 iPseU_CNN:0;iRNA_PseU:0 22333 chr6 106999829 106999829 1 + C A UCEC 106999828 + 106999808 106999848 41 GGGAGGCAAAAATTGTAAGATCTCTTCTGTTCAACCTATAT GGGAGGCAAAAATTGTAAGATATCTTCTGTTCAACCTATAT < 41bp 0.476095105847916 0.824679539135151 0.3397352 0.37785125 prediction 0.649359078270302 Functional Gain - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:106999828 chr6:106999829 synonymous SNV . 0 22 hPsi_associated_SNPs_28609 0 0 0 0 1 unknown 0.438717928943771 0.438719359557219 0 0 hPsi_site_22333 iPseU_CNN:0;iRNA_PseU:0 22334 chr4 78532150 78532150 1 + C A UCEC 78532149 + 78532129 78532169 41 TTCTGCTTCACAGAAGAAGTTCTTCAACTCTACCAGTTCCA TTCTGCTTCACAGAAGAAGTTATTCAACTCTACCAGTTCCA < 41bp 0.50115503983296 0.825832364743744 0.38244244 0.68817925 prediction 0.649354649821568 Functional Gain - CXCL13 ENSG00000156234 CDS Human protein_coding chr4:78532149 chr4:78532150 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_28610 0 0 0 0 1 exosome 0.437346863642165 0.439614329575715 0.3763585 0 hPsi_site_22334 iPseU_CNN:0.3763585;iRNA_PseU:0 22335 chr8 110099894 110099894 1 + G A BLCA 110099893 + 110099873 110099913 41 CATGGTAGTCCTGGTTGTCATGAGAACCAAGCACATGAGGA CATGGTAGTCCTGGTTGTCATAAGAACCAAGCACATGAGGA < 41bp 0.423699349457805 0.824673863123438 0.28156644 0.30472633 prediction 0.649347726246875 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110099893 chr8:110099894 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28611 0 0 0 0 0 exosome 0.439706007142656 0.437479677768564 0 0 hPsi_site_22335 iPseU_CNN:0;iRNA_PseU:0 22336 chr17 4443223 4443223 1 + G A SKCM 4443222 + 4443202 4443242 41 GATGGGGCTCTGGGTGGCACTGGGGATCTCCTTGGCATCCT GATGGGGCTCTGGGTGGCACTAGGGATCTCCTTGGCATCCT < 41bp 0.510241681763782 0.834905062490284 0.18514088 0.24584803 prediction 0.649326761453005 Functional Gain - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4443222 chr17:4443223 synonymous SNV . 0 22 hPsi_associated_SNPs_28612 0 0 0 0 0 Nucleus 0.438718593471746 0.438718593787486 0 0 hPsi_site_22336 iPseU_CNN:0;iRNA_PseU:0 22337 chr5 140594317 140594317 1 + G A HNSC 140594316 + 140594296 140594336 41 CTGGACCGAGAGGAAGAAGCTGAGCTCAGGTTAACACTCAC CTGGACCGAGAGGAAGAAGCTAAGCTCAGGTTAACACTCAC < 41bp 0.433717401630581 0.824656614157992 0.298352 0.6875577 prediction 0.649313228315984 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140594316 chr5:140594317 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_28613 0 0 0 0 0 exosome 0.438399195605481 0.438706508976161 0.3751154 0 hPsi_site_22337 iPseU_CNN:0.3751154;iRNA_PseU:0 22338 chr14 101421716 101421716 1 + G A ESCA 101421715 + 101421695 101421735 41 GCCAATTCTGGCTGGATTGATGATGACCACTGGTGGCCTAT GCCAATTCTGGCTGGATTGATAATGACCACTGGTGGCCTAT < 41bp 0.486014277648462 0.824656106366325 0.30986604 0.6504374 prediction 0.64931221273265 Functional Gain - SNORD114-5 ENSG00000199798 ncRNA_exonic Human snoRNA chr14:101421715 chr14:101421716 . . 0 22 hPsi_associated_SNPs_28614 0 0 0 0 0 unknown 0.4376699675896 0.438361582926107 0.3008748 0 hPsi_site_22338 iPseU_CNN:0.3008748;iRNA_PseU:0 22339 chr2 191235767 191235767 1 + G T LUAD 191235766 + 191235746 191235786 41 AAGCTGCATTGTCACGTGTGTGTGGAGATCGCATATTTGGG AAGCTGCATTGTCACGTGTGTTTGGAGATCGCATATTTGGG < 41bp 0.502039290739756 0.826692384138642 0.3013273 0.44201905 prediction 0.649306186797772 Functional Gain - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191235766 chr2:191235767 nonsynonymous SNV 0.052 2 22 hPsi_associated_SNPs_28615 0 0 0 0 0 exosome 0.438718452372128 0.43870336938954 0 0 hPsi_site_22339 iPseU_CNN:0;iRNA_PseU:0 22340 chr1 33292423 33292423 1 + C A HNSC 33292422 + 33292402 33292442 41 TACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTC TACGTCTGTATTCTCTCGGATATCAGACCATTCAGAGACTC < 41bp 0.475270888291583 0.824647440872328 0.28411877 0.42010707 prediction 0.649294881744656 Functional Gain - S100PBP ENSG00000116497 CDS Human protein_coding chr1:33292422 chr1:33292423 synonymous SNV . 0 22 hPsi_associated_SNPs_28616 0 0 1 0 0 membrane 0.43871859147765 0.438724892859491 0 0 hPsi_site_22340 iPseU_CNN:0;iRNA_PseU:0 22341 chr8 134237702 134237702 1 + C A LUAD 134237701 + 134237681 134237721 41 CAAGCCCCTGGAGCCCTTGCTCCACCAGCTGCGGCCTGGGG CAAGCCCCTGGAGCCCTTGCTACACCAGCTGCGGCCTGGGG < 41bp 0.454350987238895 0.824644152540989 0.32215643 0.6192101 prediction 0.649288305081978 Functional Gain - WISP1 ENSG00000104415 CDS Human protein_coding chr8:134237701 chr8:134237702 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_28617 0 0 0 0 1 nucleus 0.438718592976994 0.438718149667867 0.2384202 0 hPsi_site_22341 iPseU_CNN:0.2384202;iRNA_PseU:0 22342 chr17 8157354 8157354 1 + G A UCEC 8157353 + 8157333 8157373 41 GCAAGGGAAACTGCCAGAGCTGCAGGGCGTCGAGACTGAAC GCAAGGGAAACTGCCAGAGCTACAGGGCGTCGAGACTGAAC < 41bp 0.4157605763428 0.824639496980408 0.24707234 0.39606452 prediction 0.649278993960816 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8157353 chr17:8157354 synonymous SNV . 0 22 hPsi_associated_SNPs_28618 0 0 1 0 1 Nucleus 0.43871863830718 0.438715037322095 0 0 hPsi_site_22342 iPseU_CNN:0;iRNA_PseU:0 22343 chr3 44399344 44399344 1 + C A UCEC 44399343 + 44399323 44399363 41 TTTTGCAGTACATCCAGATTTCTTTGGACAGCACCCCGTAG TTTTGCAGTACATCCAGATTTATTTGGACAGCACCCCGTAG < 41bp 0.462000707555753 0.824637263351368 0.6100955 0.71503437 prediction 0.649274526702737 Functional Gain - TCAIM ENSG00000179152 CDS Human protein_coding chr3:44399343 chr3:44399344 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28619 0 0 1 0 0 Cytosol 0.438718592744643 0.438718594574994 0.20987774 0 hPsi_site_22343 iPseU_CNN:0.20987774;iRNA_PseU:0 22344 chr11 46760630 46760630 1 + G T SARC 46760629 + 46760609 46760649 41 GATGAAGGGAAACGAGGGGATGCCTGTGAAGGTGACAGTGG GATGAAGGGAAACGAGGGGATTCCTGTGAAGGTGACAGTGG < 41bp 0.486081830996641 0.82463679659768 0.21847007 0.36988094 prediction 0.649273593195361 Functional Gain - F2 ENSG00000180210 CDS Human protein_coding chr11:46760629 chr11:46760630 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28620 0 0 1 0 2 cytosol 0.438716219444106 0.438732724478431 0 0 hPsi_site_22344 iPseU_CNN:0;iRNA_PseU:0 22345 chr20 42694687 42694687 1 + G T LUAD 42694686 + 42694666 42694706 41 AGCCCCCCAGCCCCCTGTCCTGCCCACCCCCATGGCACTCC AGCCCCCCAGCCCCCTGTCCTTCCCACCCCCATGGCACTCC < 41bp 0.489376483687789 0.82463256841378 0.33881336 0.3913917 prediction 0.64926513682756 Functional Gain - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42694686 chr20:42694687 synonymous SNV . 0 22 hPsi_associated_SNPs_28621 0 0 0 0 1 exosome 0.438718592995101 0.43871859308421 0 0 hPsi_site_22345 iPseU_CNN:0;iRNA_PseU:0 22346 chr2 17830679 17830679 1 + C A PAAD 17830678 + 17830658 17830698 41 CGCGTGTTCTCCTTTGCAGTTCTTTCCTTATGGAGACGCCT CGCGTGTTCTCCTTTGCAGTTATTTCCTTATGGAGACGCCT < 41bp 0.534908324046095 0.859533228659863 0.5940387 0.6841353 prediction 0.649249809227536 Functional Gain - VSNL1 ENSG00000163032 CDS Human protein_coding chr2:17830678 chr2:17830679 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_28622 0 0 0 0 1 cytosol 0.438713247026579 0.438718605546778 0.1801932 0 hPsi_site_22346 iPseU_CNN:0.1801932;iRNA_PseU:0 22347 chr11 4608301 4608301 1 + G A SKCM 4608300 + 4608280 4608320 41 TGGATGGATTCCACTCGGCATGAGCCCATGTATTGCTTTCT TGGATGGATTCCACTCGGCATAAGCCCATGTATTGCTTTCT < 41bp 0.431135283778323 0.824622541905436 0.16975221 0.2831772 prediction 0.649245083810873 Functional Gain - OR52I2 ENSG00000226288 CDS Human protein_coding chr11:4608300 chr11:4608301 nonsynonymous SNV 0.652 2 22 hPsi_associated_SNPs_28623 0 0 0 0 0 unknown 0.438715244158774 0.441875797552781 0 0 hPsi_site_22347 iPseU_CNN:0;iRNA_PseU:0 22348 chrX 30236834 30236834 1 + C A UCEC 30236833 + 30236813 30236853 41 CCTGCTGTTCCTCTTCTGTTTCTGGGGGTGCTGCTTCAAGC CCTGCTGTTCCTCTTCTGTTTATGGGGGTGCTGCTTCAAGC < 41bp 0.529488047311606 0.854109054043209 0.49021143 0.607362 prediction 0.649242013463206 Functional Gain - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236833 chrX:30236834 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_28624 0 0 1 0 0 exosome 0.438726663003261 0.438639594831449 0.214724 0 hPsi_site_22348 iPseU_CNN:0.214724;iRNA_PseU:0 22349 chr14 21469700 21469700 1 + G A BLCA 21469699 + 21469679 21469719 41 AAGTGGAGCTGTGTAGCCGCTGGTTTTGCCTTCATGGCCTT AAGTGGAGCTGTGTAGCCGCTAGTTTTGCCTTCATGGCCTT < 41bp 0.571838347038892 0.896456730839797 0.25442234 0.3394366 prediction 0.649236767601811 Functional Gain - SLC39A2 ENSG00000165794 CDS Human protein_coding chr14:21469699 chr14:21469700 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_28625 0 0 0 0 0 exosome 0.438718595380219 0.438729059975471 0 0 hPsi_site_22349 iPseU_CNN:0;iRNA_PseU:0 22350 chr10 72511365 72511365 1 + C A MESO 72511364 + 72511344 72511384 41 GGACACCTATGAGTGGGCGCTCAAGAGCTGGGCCCCCTGCA GGACACCTATGAGTGGGCGCTAAAGAGCTGGGCCCCCTGCA < 41bp 0.547930867693416 0.87254746776665 0.25164217 0.3036511 prediction 0.649233200146468 Functional Gain - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72511364 chr10:72511365 synonymous SNV . 0 22 hPsi_associated_SNPs_28626 0 0 0 0 1 chromatin 0.438718399082987 0.438718588336583 0 0 hPsi_site_22350 iPseU_CNN:0;iRNA_PseU:0 22351 chr1 898200 898200 1 + G A UCEC 898199 + 898179 898219 41 GGACCTCCTCATCGAGGCCCTGAAGTTCCACCTGCTGCCTG GGACCTCCTCATCGAGGCCCTAAAGTTCCACCTGCTGCCTG < 41bp 0.546416376958197 0.871031775138904 0.21472141 0.4987183 prediction 0.649230796361413 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898199 chr1:898200 synonymous SNV . 0 22 hPsi_associated_SNPs_28627 0 0 1 1 1 Cytosol 0.438717894743554 0.438718510154115 0 0 hPsi_site_22351 iPseU_CNN:0;iRNA_PseU:0 22352 chr19 47646784 47646784 1 + G A BLCA 47646783 + 47646763 47646803 41 TCGGGTGCTTCTTGTCGGCTTGAAAGGACTTGGGGCTGAAA TCGGGTGCTTCTTGTCGGCTTAAAAGGACTTGGGGCTGAAA < 41bp 0.571362240162562 0.895975763665114 0.2959904 0.56830674 prediction 0.649227047005105 Functional Gain - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47646783 chr19:47646784 synonymous SNV . 0 22 hPsi_associated_SNPs_28628 0 0 1 0 2 Ribosome 0.438718580431962 0.438718593005845 0.13661348 0 hPsi_site_22352 iPseU_CNN:0.13661348;iRNA_PseU:0 22353 chr1 41300643 41300643 1 + C A UCEC 41300642 + 41300622 41300662 41 GCCCCCTCCCCCAACAGGATTCTCAAGTTCCTGGTGGCCAA GCCCCCTCCCCCAACAGGATTATCAAGTTCCTGGTGGCCAA < 41bp 0.469347198411249 0.824612350940356 0.34422496 0.488652 prediction 0.649224701880713 Functional Gain - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41300642 chr1:41300643 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_28629 0 0 0 0 1 chromatin 0.438718592995091 0.43871859241406 0 0 hPsi_site_22353 iPseU_CNN:0;iRNA_PseU:0 22354 chr16 89925739 89925739 1 + G A LUSC 89925738 + 89925718 89925758 41 GAGCTGGCAGTGCGCATGTGTGGAGGCCCGGCTCCCGAGAC GAGCTGGCAGTGCGCATGTGTAGAGGCCCGGCTCCCGAGAC < 41bp 0.406375552784729 0.824611618581105 0.44020015 0.720707 prediction 0.649223237162211 Functional Gain - SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89925738 chr16:89925739 stopgain 0.039 0 22 hPsi_associated_SNPs_28630 0 0 1 0 0 Cytosol 0.438718617686751 0.438825473664129 0.441414 0 hPsi_site_22354 iPseU_CNN:0.441414;iRNA_PseU:0 22355 chr17 7415809 7415809 1 + C A UCEC 7415808 + 7415788 7415828 41 CTTTGCAGCCACCGGCATGTTCTTTGGTTCAGCACCCAGTC CTTTGCAGCCACCGGCATGTTATTTGGTTCAGCACCCAGTC < 41bp 0.542516446538845 0.867126538236189 0.8676032 0.9229052 prediction 0.64922018339469 Functional Gain - POLR2A ENSG00000181222 CDS Human protein_coding chr17:7415808 chr17:7415809 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28631 0 0 1 0 1 Nucleus 0.438680015248434 0.438719175993028 0.110604 0 hPsi_site_22355 iPseU_CNN:0.110604;iRNA_PseU:0 22356 chr5 128994368 128994368 1 + G A LUAD 128994367 + 128994347 128994387 41 GAGAAGATCATTGTGGTGTATGCAATGGCAATGGAAAATCA GAGAAGATCATTGTGGTGTATACAATGGCAATGGAAAATCA < 41bp 0.431502963178929 0.824604193000033 0.26318106 0.3075441 prediction 0.649208386000065 Functional Gain - ADAMTS19 ENSG00000145808 CDS Human protein_coding chr5:128994367 chr5:128994368 nonsynonymous SNV 0.990 4 22 hPsi_associated_SNPs_28632 0 0 1 0 2 exosome 0.424217945868765 0.437044868676304 0 0 hPsi_site_22356 iPseU_CNN:0;iRNA_PseU:0 22357 chr12 49663613 49663613 1 + G A TGCT 49663612 + 49663592 49663632 41 CCCCCATCATGTTCTCCAGATGAAGTTCGCACTGGCACTTA CCCCCATCATGTTCTCCAGATAAAGTTCGCACTGGCACTTA < 41bp 0.402751444573943 0.824603275036567 0.16284883 0.22207546 prediction 0.649206550073135 Functional Gain - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49663612 chr12:49663613 nonsynonymous SNV 0.992 2 22 hPsi_associated_SNPs_28633 0 0 1 0 1 Cytosol 0.438718726895035 0.438721888495489 0 0 hPsi_site_22357 iPseU_CNN:0;iRNA_PseU:0 22358 chr22 42166870 42166870 1 + G A LUSC 42166869 + 42166849 42166889 41 AGCAGCTATGAGGAACTGGATGATGTCACCTCTGCTGGGCA AGCAGCTATGAGGAACTGGATAATGTCACCTCTGCTGGGCA < 41bp 0.564389040539386 0.888990297876184 0.31968403 0.5029119 prediction 0.649202514673596 Functional Gain - MEI1 ENSG00000167077 CDS Human protein_coding chr22:42166869 chr22:42166870 nonsynonymous SNV 0.962 0 22 hPsi_associated_SNPs_28634 0 0 0 0 1 exosome 0.4409174596856 0.431432052178287 0.00582379999999993 0 hPsi_site_22358 iPseU_CNN:0.00582379999999993;iRNA_PseU:0 22359 chrX 3002575 3002575 1 + G A SKCM 3002574 + 3002554 3002594 41 TTTTCCTCTTGGGCTATGCTTGGTTCTCCAGCCACACGTCC TTTTCCTCTTGGGCTATGCTTAGTTCTCCAGCCACACGTCC < 41bp 0.404166378294213 0.824600163666215 0.26510134 0.665833 prediction 0.649200327332431 Functional Gain - ARSF ENSG00000062096 CDS Human protein_coding chrX:3002574 chrX:3002575 stopgain 0.164 0 22 hPsi_associated_SNPs_28635 0 0 0 0 0 unknown 0.438720791431674 0.438718592994932 0.331666 0 hPsi_site_22359 iPseU_CNN:0.331666;iRNA_PseU:0 22360 chr20 62871199 62871199 1 + G A LUSC 62871198 + 62871178 62871218 41 TGAAGCCCTGTTTCTGGAGCTGTCCGGCCTGAGCCAGGCCC TGAAGCCCTGTTTCTGGAGCTATCCGGCCTGAGCCAGGCCC < 41bp 0.580170680558838 0.904763225239922 0.32490003 0.63152725 prediction 0.649185089362169 Functional Gain - MYT1 ENSG00000196132 CDS Human protein_coding chr20:62871198 chr20:62871199 synonymous SNV . 0 22 hPsi_associated_SNPs_28636 0 0 0 0 2 exosome 0.438725098019535 0.438720757053933 0.2630545 0 hPsi_site_22360 iPseU_CNN:0.2630545;iRNA_PseU:0 22361 chr3 186389461 186389461 1 + C A COAD 186389460 + 186389440 186389480 41 TAGTCCGGTCCTCATAGATTTCTTTGAGGATACTGAGCGCT TAGTCCGGTCCTCATAGATTTATTTGAGGATACTGAGCGCT < 41bp 0.551785834189315 0.876376982705003 0.579257 0.8064895 prediction 0.649182297031377 Functional Gain - HRG ENSG00000113905 CDS Human protein_coding chr3:186389460 chr3:186389461 nonsynonymous SNV 0.439 0 22 hPsi_associated_SNPs_28637 0 0 0 0 1 exosome 0.438718592995102 0.438718592875126 0.454465 0 hPsi_site_22361 iPseU_CNN:0.454465;iRNA_PseU:0 22362 chr8 1877509 1877509 1 + C A UCEC 1877508 + 1877488 1877528 41 AGTGAGACTTCAGCACTTTTTCACTCCTGAGAAGTCCACAG AGTGAGACTTCAGCACTTTTTAACTCCTGAGAAGTCCACAG < 41bp 0.470212208697787 0.824587046464149 0.2777788 0.34457922 prediction 0.649174092928297 Functional Gain - ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1877508 chr8:1877509 nonsynonymous SNV 0.125 1 22 hPsi_associated_SNPs_28638 0 0 1 0 1 Nucleus 0.43873471812006 0.438722037547157 0 0 hPsi_site_22362 iPseU_CNN:0;iRNA_PseU:0 22363 chr1 248263173 248263173 1 + C A LUSC 248263172 + 248263152 248263192 41 ACAGTCTTTGCCCTTCATATTCCCTACTGCAGGTCTAGGGC ACAGTCTTTGCCCTTCATATTACCTACTGCAGGTCTAGGGC < 41bp 0.534111052262007 0.858688224744299 0.24687406 0.34575105 prediction 0.649154344964584 Functional Gain - OR2L13 ENSG00000196071 CDS Human protein_coding chr1:248263172 chr1:248263173 nonsynonymous SNV 0.019 2 22 hPsi_associated_SNPs_28639 0 0 0 0 0 Nucleus 0.438718578023196 0.438718715440175 0 0 hPsi_site_22363 iPseU_CNN:0;iRNA_PseU:0 22364 chr10 81682746 81682746 1 + C A UCEC 81682745 + 81682725 81682765 41 CAACGGGCTCTGGAATGGCATCTCCTGCACCTCCTCCTTCA CAACGGGCTCTGGAATGGCATATCCTGCACCTCCTCCTTCA < 41bp 0.517016920785499 0.8415897382811 0.6256837 0.7591564 prediction 0.649145634991201 Functional Gain - MBL1P ENSG00000242600 ncRNA_exonic Human transcribed_unitary_pseudogene chr10:81682745 chr10:81682746 . . 0 22 hPsi_associated_SNPs_28640 0 0 0 0 0 unknown 0.438715702974934 0.438719976117548 0.2669454 0 hPsi_site_22364 iPseU_CNN:0.2669454;iRNA_PseU:0 22365 chr12 98992312 98992312 1 + C A UCEC 98992311 + 98992291 98992331 41 GGATTTTAGGAGAATACTTATCTCTGGCGCACATCACTATA GGATTTTAGGAGAATACTTATATCTGGCGCACATCACTATA < 41bp 0.458782026914786 0.824571435208583 0.2935158 0.35193694 prediction 0.649142870417167 Functional Gain - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992311 chr12:98992312 nonsynonymous SNV 0.859 1 22 hPsi_associated_SNPs_28641 0 0 1 0 1 Ribosome 0.438718592993578 0.438718592966862 0 0 hPsi_site_22365 iPseU_CNN:0;iRNA_PseU:0 22366 chr12 53412635 53412635 1 + G T GBM 53412634 + 53412614 53412654 41 GTGTATAGGGCGCCTCCAATTGACCGTTCCATCCTTCCCAC GTGTATAGGGCGCCTCCAATTTACCGTTCCATCCTTCCCAC < 41bp 0.4862683824362 0.824569498395718 0.26216838 0.58890724 prediction 0.649138996791436 Functional Gain - EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412634 chr12:53412635 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28642 0 0 1 0 1 Cytosol 0.438882144930507 0.438719881410465 0.17781448 0 hPsi_site_22366 iPseU_CNN:0.17781448;iRNA_PseU:0 22367 chr12 113376480 113376480 1 + G A rs62623451 113376479 + 113376459 113376499 41 GAGCGCGGGGGCCGCCTCGGTGCTGCTGCCCCGCGGGTGCT GAGCGCGGGGGCCGCCTCGGTACTGCTGCCCCGCGGGTGCT < 41bp 0.56478942139253 0.889358405674026 0.48333448 0.95007217 prediction 0.649137968562991 Functional Gain - OAS3 ENSG00000111331 CDS Human protein_coding chr12:113376479 chr12:113376480 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28643 0 0 1 0 1 Nucleus 0.438718430882269 0.438714667291894 0.90014434 0 hPsi_site_22367 iPseU_CNN:0.90014434;iRNA_PseU:0 22368 chr11 36614561 36614561 1 + G T rs34629171 36614562 - 36614542 36614582 41 AGACTCTGAAGAATTTTGTTTCAGTGCAGAAGCAAATAGTT AGACTCTGAAGAATTTTGTTTAAGTGCAGAAGCAAATAGTT < 41bp 0.473332412512632 0.824559419035512 0.24635401 0.367585 prediction 0.649118838071023 Functional Gain - RAG2 ENSG00000175097 CDS Human protein_coding chr11:36614562 chr11:36614561 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28644 1 0 0 0 0 exosome 0.438729467520098 0.438926985445518 0 0 hPsi_site_22368 iPseU_CNN:0;iRNA_PseU:0 22369 chr11 70266538 70266538 1 + G A GBM 70266537 + 70266517 70266557 41 GGGTTTGGAGGAAAATTTGGTGTGCAGACAGACAGACAAGA GGGTTTGGAGGAAAATTTGGTATGCAGACAGACAGACAAGA < 41bp 0.581244550717583 0.905787651388712 0.26743156 0.4829593 prediction 0.649086201342258 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70266537 chr11:70266538 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28645 0 0 1 0 1 Ribosome 0.43871859314333 0.438718592994682 0 0 hPsi_site_22369 iPseU_CNN:0;iRNA_PseU:0 22370 chr19 10184013 10184013 1 + C A rs570384304 10184012 + 10183992 10184032 41 ACCCCTGGCCATGAAGAAATTCGTCTCCCATGCCACTTGCC ACCCCTGGCCATGAAGAAATTAGTCTCCCATGCCACTTGCC < 41bp 0.466784445330365 0.824541423095191 0.29976743 0.5545492 prediction 0.649082846190382 Functional Gain - C3P1 ENSG00000167798 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:10184012 chr19:10184013 . . 0 22 hPsi_associated_SNPs_28646 0 0 0 0 2 unknown 0.438717710610111 0.438718594377272 0.1090984 0 hPsi_site_22370 iPseU_CNN:0.1090984;iRNA_PseU:0 22371 chr22 31489566 31489566 1 + G A rs116431662 31489565 + 31489545 31489585 41 ACCCAGGCAGCCGAGGTAGCTGTAGCCACCGTGGAGCCGGT ACCCAGGCAGCCGAGGTAGCTATAGCCACCGTGGAGCCGGT < 41bp 0.431658991699559 0.824540763773122 0.34311557 0.54343855 prediction 0.649081527546245 Functional Gain - SMTN ENSG00000183963 CDS Human protein_coding chr22:31489565 chr22:31489566 nonsynonymous SNV 0.185 2 22 hPsi_associated_SNPs_28647 0 0 0 0 0 Cytosol 0.438718592375702 0.438718592846758 0.0868770999999999 0 hPsi_site_22371 iPseU_CNN:0.0868770999999999;iRNA_PseU:0 22372 chr10 15145809 15145809 1 + G A HNSC 15145808 + 15145788 15145828 41 TGTCAGGTCCCCCGGCTCAGTGAGAGAATCGCCCCCGTCAT TGTCAGGTCCCCCGGCTCAGTAAGAGAATCGCCCCCGTCAT < 41bp 0.581250570426726 0.905790436558232 0.27669978 0.67408174 prediction 0.649079732263012 Functional Gain - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145808 chr10:15145809 nonsynonymous SNV 0.879 1 22 hPsi_associated_SNPs_28648 0 0 1 0 0 exosome 0.42541452806096 0.438719595155763 0.34816348 0 hPsi_site_22372 iPseU_CNN:0.34816348;iRNA_PseU:0 22373 chr11 65733919 65733919 1 + G A TGCT 65733918 + 65733898 65733938 41 GGGCGGCACGGCTGATGGCCTGCGGGAGCGGGAGCTGGAGG GGGCGGCACGGCTGATGGCCTACGGGAGCGGGAGCTGGAGG < 41bp 0.576835422150327 0.901371317905216 0.2325182 0.6139426 prediction 0.649071791509779 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65733918 chr11:65733919 synonymous SNV . 0 22 hPsi_associated_SNPs_28649 0 0 1 0 1 Cytosol 0.438348837093211 0.439214939475911 0.2278852 0 hPsi_site_22373 iPseU_CNN:0.2278852;iRNA_PseU:0 22374 chr6 37247114 37247114 1 + C A rs115021976 37247113 + 37247093 37247133 41 CGATCAAAAGTCAACACAGTTCCTCTGAAGAATAAGAAGGC CGATCAAAAGTCAACACAGTTACTCTGAAGAATAAGAAGGC < 41bp 0.531960544318836 0.856495203588492 0.22577882 0.53918886 prediction 0.649069318539312 Functional Gain - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37247113 chr6:37247114 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28650 0 0 1 0 1 chromatin 0.438728758272383 0.438738821379454 0.07837772 0 hPsi_site_22374 iPseU_CNN:0.07837772;iRNA_PseU:0 22375 chr6 43488442 43488442 1 + G A STAD 43488441 + 43488421 43488461 41 CATCACCCTGCTTGAGCCCGTGGAAGGGGAGGCAGCTGAGG CATCACCCTGCTTGAGCCCGTAGAAGGGGAGGCAGCTGAGG < 41bp 0.401875156406457 0.824533310794636 0.21078941 0.30418605 prediction 0.649066621589273 Functional Gain - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488441 chr6:43488442 synonymous SNV . 0 22 hPsi_associated_SNPs_28651 0 0 1 0 2 Ribosome 0.438718592987008 0.438718592968634 0 0 hPsi_site_22375 iPseU_CNN:0;iRNA_PseU:0 22376 chrX 46939725 46939725 1 + C A rs781997735 46939724 + 46939704 46939744 41 TCTCCTTTTCAGATAATTTTTCTCTGTCTTCTCCCAGTTCG TCTCCTTTTCAGATAATTTTTATCTGTCTTCTCCCAGTTCG < 41bp 0.488732735339333 0.824532752880772 0.27952236 0.32860947 prediction 0.649065505761544 Functional Gain - RGN ENSG00000130988 UTR5 Human protein_coding chrX:46939724 chrX:46939725 . . 0 22 hPsi_associated_SNPs_28652 0 0 0 0 1 Cytosol 0.438716139626486 0.438720763354248 0 0 hPsi_site_22376 iPseU_CNN:0;iRNA_PseU:0 22377 chr16 85954723 85954723 1 + G A LUSC 85954722 + 85954702 85954742 41 TCCCATCTAGATTGAGCAGCTGTATGTCCGGCAACTGGCAG TCCCATCTAGATTGAGCAGCTATATGTCCGGCAACTGGCAG < 41bp 0.418632935830066 0.82452901582727 0.35216615 0.32982117 prediction 0.649058031654539 Functional Gain - IRF8 ENSG00000140968 CDS Human protein_coding chr16:85954722 chr16:85954723 synonymous SNV . 0 22 hPsi_associated_SNPs_28653 0 0 0 0 1 Endoplasmic reticulum 0.44037225381623 0.439143330380838 0 0 hPsi_site_22377 iPseU_CNN:0;iRNA_PseU:0 22378 chr3 52398920 52398920 1 + C A UCEC 52398919 + 52398899 52398939 41 GCAGGAGGACCTCAAGCTCTTCTCTGGCATCGTGTCCGACC GCAGGAGGACCTCAAGCTCTTATCTGGCATCGTGTCCGACC < 41bp 0.484996435665568 0.824526636736286 0.51789147 0.75244534 prediction 0.649053273472571 Functional Gain - DNAH1 ENSG00000114841 CDS Human protein_coding chr3:52398919 chr3:52398920 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28654 0 0 0 0 1 chromatin 0.438716039310793 0.438718140799604 0.46910774 0 hPsi_site_22378 iPseU_CNN:0.46910774;iRNA_PseU:0 22379 chr11 65387379 65387379 1 + G A COAD 65387378 + 65387358 65387398 41 GATGACACTTCTGAGGGTGCTGTGCACTATTTCTACGATGA GATGACACTTCTGAGGGTGCTATGCACTATTTCTACGATGA < 41bp 0.417793877830028 0.824520923800808 0.27840704 0.4673372 prediction 0.649041847601616 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65387378 chr11:65387379 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28655 0 0 1 0 1 Ribosome 0.439950282330366 0.43935168280113 0 0 hPsi_site_22379 iPseU_CNN:0;iRNA_PseU:0 22380 chr17 48433278 48433278 1 + G A KIRC 48433277 + 48433257 48433297 41 TTCGTGCTGACACGCAGCTTTGTGGAGTATGTGGTGTACAC TTCGTGCTGACACGCAGCTTTATGGAGTATGTGGTGTACAC < 41bp 0.578603951996604 0.903119571904451 0.40915018 0.3318106 prediction 0.649031239815695 Functional Gain - XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433277 chr17:48433278 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_28656 0 0 1 0 1 nucleolus 0.438875299284564 0.439628985174414 0 0 hPsi_site_22380 iPseU_CNN:0;iRNA_PseU:0 22381 chr12 4873136 4873136 1 + G A SKCM 4873135 + 4873115 4873155 41 CAGATGAAAAACCTATTGGATGAAAATGTCTGCTTGGATCA CAGATGAAAAACCTATTGGATAAAAATGTCTGCTTGGATCA < 41bp 0.413706602560094 0.824514650162131 0.33167994 0.76837707 prediction 0.649029300324262 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4873135 chr12:4873136 nonsynonymous SNV 0.389 0 22 hPsi_associated_SNPs_28657 0 0 0 0 2 cytosol 0.438620074082409 0.438721390824377 0.53675414 0 hPsi_site_22381 iPseU_CNN:0.53675414;iRNA_PseU:0 22382 chr8 120429032 120429032 1 + G A LUSC 120429031 + 120429011 120429051 41 CAGTGCCCGGGCCGGTGCCCTGCGACGCCGCCGACCTGCGC CAGTGCCCGGGCCGGTGCCCTACGACGCCGCCGACCTGCGC < 41bp 0.428602067028993 0.824513328570637 0.44560042 0.8756199 prediction 0.649026657141274 Functional Gain - NOV ENSG00000136999 CDS Human protein_coding chr8:120429031 chr8:120429032 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28658 0 0 0 0 1 exosome 0.438754514504914 0.438887017610862 0.7512398 0 hPsi_site_22382 iPseU_CNN:0.7512398;iRNA_PseU:0 22383 chr14 101416225 101416225 1 + G A LUAD 101416224 + 101416204 101416244 41 ATTGACGGTGAATACAGGTCTGGAAGTCTGAGGTCCAATAT ATTGACGGTGAATACAGGTCTAGAAGTCTGAGGTCCAATAT < 41bp 0.525236532401402 0.849747436386098 0.25480592 0.29825002 prediction 0.64902180796939 Functional Gain - SNORD114-1 ENSG00000199575 ncRNA_exonic Human snoRNA chr14:101416224 chr14:101416225 . . 0 22 hPsi_associated_SNPs_28659 0 0 0 0 0 unknown 0.438716890185724 0.438718305887867 0 0 hPsi_site_22383 iPseU_CNN:0;iRNA_PseU:0 22384 chr17 48549888 48549888 1 + G A COAD 48549887 + 48549867 48549907 41 GTCATGCTGGGCTACTGGGGTGAGCCTCAGAAGACAGAGGA GTCATGCTGGGCTACTGGGGTAAGCCTCAGAAGACAGAGGA < 41bp 0.406588902164366 0.824509929337975 0.24436048 0.65270686 prediction 0.64901985867595 Functional Gain - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48549887 chr17:48549888 nonsynonymous SNV 0.856 2 22 hPsi_associated_SNPs_28660 0 0 1 0 1 Endoplasmic reticulum 0.438718670889311 0.438718592163163 0.30541372 0 hPsi_site_22384 iPseU_CNN:0.30541372;iRNA_PseU:0 22385 chr2 220379743 220379743 1 + G A LUAD 220379742 + 220379722 220379762 41 CCTGACCCGGCCTCACCTGGTGGCAATGGACCCCGCTGCCC CCTGACCCGGCCTCACCTGGTAGCAATGGACCCCGCTGCCC < 41bp 0.405643491925625 0.82450979978856 0.2736258 0.42518863 prediction 0.64901959957712 Functional Gain - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379742 chr2:220379743 synonymous SNV . 0 22 hPsi_associated_SNPs_28661 0 0 0 0 0 chromatin 0.43871859291836 0.438718436411476 0 0 hPsi_site_22385 iPseU_CNN:0;iRNA_PseU:0 22386 chr8 103573050 103573050 1 + G A SKCM 103573049 + 103573029 103573069 41 TGCAACCCGTGCAGCCCATATGATCCTTGCAACCCGTGTTA TGCAACCCGTGCAGCCCATATAATCCTTGCAACCCGTGTTA < 41bp 0.423537126373286 0.824506089192417 0.27308244 0.75813556 prediction 0.649012178384833 Functional Gain - ODF1 ENSG00000155087 CDS Human protein_coding chr8:103573049 chr8:103573050 nonsynonymous SNV 0.706 0 22 hPsi_associated_SNPs_28662 0 0 0 0 0 unknown 0.439004788426638 0.438716071063235 0.51627112 0 hPsi_site_22386 iPseU_CNN:0.51627112;iRNA_PseU:0 22387 chr13 43180752 43180752 1 + G A STAD 43180751 + 43180731 43180771 41 GATGGCTTTTATTACCTGTATGCCAACATTTGCTTTCGACA GATGGCTTTTATTACCTGTATACCAACATTTGCTTTCGACA < 41bp 0.566163053205324 0.89066771372049 0.3057289 0.35912806 prediction 0.649009321030332 Functional Gain - TNFSF11 ENSG00000120659 CDS Human protein_coding chr13:43180751 chr13:43180752 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28663 0 0 0 0 0 exosome 0.438572674268334 0.438687094349422 0 0 hPsi_site_22387 iPseU_CNN:0;iRNA_PseU:0 22388 chr1 1387764 1387764 1 + G A rs9793256 1387763 + 1387743 1387783 41 AGGGCGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTT AGGGCGGCTGGCACCTTGTTTAGGGAAGGATTCCGTGCCTT < 41bp 0.399483911408405 0.824502891909238 0.84135807 0.89674604 prediction 0.649005783818476 Functional Gain - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387763 chr1:1387764 nonsynonymous SNV 0.792 5 22 hPsi_associated_SNPs_28664 0 0 0 0 2 Nucleus 0.438718651379078 0.438972286009794 0.11077594 0 hPsi_site_22388 iPseU_CNN:0.11077594;iRNA_PseU:0 22389 chr7 150269440 150269440 1 + G A COAD 150269439 + 150269419 150269459 41 AGGCATTTTCGACACAGAGGTGCCCAATGCTGAAACGTCCA AGGCATTTTCGACACAGAGGTACCCAATGCTGAAACGTCCA < 41bp 0.574949369908023 0.899450150082725 0.21054131 0.6956209 prediction 0.649001560349404 Functional Gain - GIMAP4 ENSG00000133574 CDS Human protein_coding chr7:150269439 chr7:150269440 synonymous SNV . 0 22 hPsi_associated_SNPs_28665 0 0 0 0 0 exosome 0.438702822211062 0.43834276648505 0.3912418 0 hPsi_site_22389 iPseU_CNN:0.3912418;iRNA_PseU:0 22390 chrX 92964451 92964451 1 + G A CESC 92964450 + 92964430 92964470 41 GGATAATCGGGTAGCCTATATGAATCCTATAGCAATGGCCA GGATAATCGGGTAGCCTATATAAATCCTATAGCAATGGCCA < 41bp 0.563906868966563 0.888404502116333 0.44778126 0.81083643 prediction 0.648995266299539 Functional Gain - FAM133A ENSG00000179083 CDS Human protein_coding chrX:92964450 chrX:92964451 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28666 0 0 0 0 0 exosome 0.438718333005591 0.438718596246919 0.62167286 0 hPsi_site_22390 iPseU_CNN:0.62167286;iRNA_PseU:0 22391 chr19 7585298 7585298 1 + C A BLCA 7585297 + 7585277 7585317 41 CTTCGGCCAGGCCTCCAGCCTCACCAAGCACAAACGGGTGC CTTCGGCCAGGCCTCCAGCCTAACCAAGCACAAACGGGTGC < 41bp 0.513455584866621 0.837949595096946 0.26900142 0.37715197 prediction 0.64898802046065 Functional Gain - ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7585297 chr19:7585298 synonymous SNV . 0 22 hPsi_associated_SNPs_28667 0 0 1 0 0 Cytosol 0.438718593334983 0.438718885570727 0 0 hPsi_site_22391 iPseU_CNN:0;iRNA_PseU:0 22392 chr7 99725543 99725543 1 + G A rs185341914 99725542 + 99725522 99725562 41 CCACGGGGGCCAGCGCGACGTGAGCGTGGTGGTGGCCGGCA CCACGGGGGCCAGCGCGACGTAAGCGTGGTGGTGGCCGGCA < 41bp 0.568522862040963 0.893009400186025 0.14088336 0.37968183 prediction 0.648973076290123 Functional Gain - MBLAC1 ENSG00000214309 CDS Human protein_coding chr7:99725542 chr7:99725543 synonymous SNV . 0 22 hPsi_associated_SNPs_28668 0 0 0 0 0 chromatin 0.438195259420203 0.438715415488615 0 0 hPsi_site_22392 iPseU_CNN:0;iRNA_PseU:0 22393 chr20 2636074 2636074 1 + G A BRCA 2636073 + 2636053 2636093 41 GGAAACCGAAGGGAACTGAATGAGGACAAGCTGGAGAAGCT GGAAACCGAAGGGAACTGAATAAGGACAAGCTGGAGAAGCT < 41bp 0.578654774565839 0.903138796192077 0.27509102 0.58164847 prediction 0.648968043252476 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2636073 chr20:2636074 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_28669 0 0 1 0 1 Cytosol 0.438718595342934 0.438718595586711 0.16329694 0 hPsi_site_22393 iPseU_CNN:0.16329694;iRNA_PseU:0 22394 chr2 74683372 74683372 1 + C A UCEC 74683371 + 74683351 74683391 41 TGGAGACCTCAAGAAGGAGATCAATGAGCGGCTGCTTACTG TGGAGACCTCAAGAAGGAGATAAATGAGCGGCTGCTTACTG < 41bp 0.460942871900798 0.824482962830937 0.30388486 0.36708322 prediction 0.648965925661874 Functional Gain - INO80B ENSG00000115274 CDS Human protein_coding chr2:74683371 chr2:74683372 synonymous SNV . 0 22 hPsi_associated_SNPs_28670 0 0 1 0 2 Ribosome 0.43868421739335 0.438726075401054 0 0 hPsi_site_22394 iPseU_CNN:0;iRNA_PseU:0 22395 chr5 43280223 43280223 1 + C A BLCA 43280222 + 43280202 43280242 41 AACACTTTCTGTGGGTCTCCTCCCTACGCTGCGCCTGAACT AACACTTTCTGTGGGTCTCCTACCTACGCTGCGCCTGAACT < 41bp 0.456767762860554 0.824479782061677 0.2919171 0.71125484 prediction 0.648959564123354 Functional Gain - NIM1K ENSG00000177453 CDS Human protein_coding chr5:43280222 chr5:43280223 nonsynonymous SNV 0.964 4 22 hPsi_associated_SNPs_28671 0 0 0 0 0 exosome 0.438718638134537 0.438704328752224 0.42250968 0 hPsi_site_22395 iPseU_CNN:0.42250968;iRNA_PseU:0 22396 chr19 4684712 4684712 1 + C A HNSC 4684711 + 4684691 4684731 41 GCCCCTTCGAACCGAAGCCCTCGCTGACAGGAGCCCCTGCC GCCCCTTCGAACCGAAGCCCTAGCTGACAGGAGCCCCTGCC < 41bp 0.543305636015254 0.867784456964605 0.21014589 0.44865716 prediction 0.648957641898701 Functional Gain - DPP9 ENSG00000142002 CDS Human protein_coding chr19:4684711 chr19:4684712 nonsynonymous SNV 0.724 4 22 hPsi_associated_SNPs_28672 0 0 0 0 0 Cytosol 0.438718614668889 0.438718592995102 0 0 hPsi_site_22396 iPseU_CNN:0;iRNA_PseU:0 22397 chr22 29837544 29837544 1 + G A READ 29837543 + 29837523 29837563 41 TTTCACAGTGGATATGACCTTGGATGCCGACACAGCCAACA TTTCACAGTGGATATGACCTTAGATGCCGACACAGCCAACA < 41bp 0.571356520145336 0.895826400176808 0.32152593 0.63728386 prediction 0.648939760062944 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837543 chr22:29837544 synonymous SNV . 0 22 hPsi_associated_SNPs_28673 0 0 0 0 1 exosome 0.438778442838871 0.43871828908552 0.27456772 0 hPsi_site_22397 iPseU_CNN:0.27456772;iRNA_PseU:0 22398 chrX 122387197 122387197 1 + C A COAD 122387196 + 122387176 122387216 41 GGTGTATGCCATCTTTGGATTCTATGACCAGATGTCAATGA GGTGTATGCCATCTTTGGATTATATGACCAGATGTCAATGA < 41bp 0.530154938477353 0.854618410373975 0.42585593 0.48297366 prediction 0.648926943793245 Functional Gain - GRIA3 ENSG00000125675 CDS Human protein_coding chrX:122387196 chrX:122387197 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28674 0 0 0 2 1 Nucleus 0.438718527088369 0.438712499168056 0 0 hPsi_site_22398 iPseU_CNN:0;iRNA_PseU:0 22399 chr8 145736101 145736101 1 + G A rs34730139 145736100 + 145736080 145736120 41 CATGGACGCTGGCACAATCTTGAGAGGTGAGGGGCTGGCCT CATGGACGCTGGCACAATCTTAAGAGGTGAGGGGCTGGCCT < 41bp 0.436478225207401 0.824461721421882 0.25663447 0.3054019 prediction 0.648923442843764 Functional Gain - MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736100 chr8:145736101 synonymous SNV . 0 22 hPsi_associated_SNPs_28675 0 0 1 0 2 Ribosome 0.43871873564698 0.438718654815385 0 0 hPsi_site_22399 iPseU_CNN:0;iRNA_PseU:0 22400 chr16 67201093 67201093 1 + G A LGG 67201092 + 67201072 67201112 41 AACACCTGCCCTCTACCTGGTGCCCTTCTGCAGGACCCCTA AACACCTGCCCTCTACCTGGTACCCTTCTGCAGGACCCCTA < 41bp 0.585680013922726 0.910139432899807 0.42441812 0.9324343 prediction 0.648918837954163 Functional Gain - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67201092 chr16:67201093 nonsynonymous SNV 0.767 0 22 hPsi_associated_SNPs_28676 0 0 0 0 2 Cytosol 0.438718592995102 0.438718592995102 0.8648686 0 hPsi_site_22400 iPseU_CNN:0.8648686;iRNA_PseU:0 22401 chr5 134332065 134332065 1 + G A STAD 134332064 + 134332044 134332084 41 AACGGCTACAACCTGCTGGATGTGATCATTATCATCGTTAT AACGGCTACAACCTGCTGGATATGATCATTATCATCGTTAT < 41bp 0.578420438302263 0.902878007727708 0.4910533 0.6420641 prediction 0.64891513885089 Functional Gain - CATSPER3 ENSG00000152705 CDS Human protein_coding chr5:134332064 chr5:134332065 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_28677 0 0 0 0 0 cytosol 0.438714108348793 0.437867622705517 0.2841282 0 hPsi_site_22401 iPseU_CNN:0.2841282;iRNA_PseU:0 22402 chr12 57920563 57920563 1 + G A BLCA 57920562 + 57920542 57920582 41 TGGGGCCTTGCCTCTCCCTCTGAGTCTGGGGCAGCCTCCAC TGGGGCCTTGCCTCTCCCTCTAAGTCTGGGGCAGCCTCCAC < 41bp 0.400551701942076 0.824451535161856 0.25592548 0.47773123 prediction 0.648903070323711 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920562 chr12:57920563 synonymous SNV . 0 22 hPsi_associated_SNPs_28678 0 0 1 0 0 chromatin 0.435843856580593 0.438833124593837 0 0 hPsi_site_22402 iPseU_CNN:0;iRNA_PseU:0 22403 chr12 2968732 2968732 1 + G A LUSC 2968731 + 2968711 2968751 41 TCCTCCTTGATAGTCTGAACTGGAAGCAAAGGAGAAAACCC TCCTCCTTGATAGTCTGAACTAGAAGCAAAGGAGAAAACCC < 41bp 0.565075475570069 0.889526776485004 0.27084076 0.29377136 prediction 0.648902601829868 Functional Gain - FOXM1 ENSG00000111206 CDS Human protein_coding chr12:2968731 chr12:2968732 nonsynonymous SNV 0.876 3 22 hPsi_associated_SNPs_28679 0 0 1 0 1 Cytosol 0.438718594683234 0.438718595516288 0 0 hPsi_site_22403 iPseU_CNN:0;iRNA_PseU:0 22404 chr5 110440423 110440423 1 + G A BLCA 110440422 + 110440402 110440442 41 ATATTTGATGGTCCTACAGGTGAAGGCCGACTTTTGAGATT ATATTTGATGGTCCTACAGGTAAAGGCCGACTTTTGAGATT < 41bp 0.416057698545138 0.82444945228076 0.22539777 0.31468636 prediction 0.64889890456152 Functional Gain - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110440422 chr5:110440423 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_28680 0 0 1 0 2 Nucleus 0.43871823540236 0.438718592993271 0 0 hPsi_site_22404 iPseU_CNN:0;iRNA_PseU:0 22405 chr12 69991468 69991468 1 + G T UCEC 69991467 + 69991447 69991487 41 GCCACTCAACAAATTTTAGATGAAGCAGAAAGATCATTGCA GCCACTCAACAAATTTTAGATTAAGCAGAAAGATCATTGCA < 41bp 0.521210890394442 0.845654261602495 0.41900337 0.47569537 prediction 0.648886742416105 Functional Gain - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69991467 chr12:69991468 stopgain 1.000 1 22 hPsi_associated_SNPs_28681 0 0 1 2 2 Nucleus 0.438183735035072 0.437047116214391 0 0 hPsi_site_22405 iPseU_CNN:0;iRNA_PseU:0 22406 chr3 129693337 129693337 1 + G A rs784707 129693336 + 129693316 129693356 41 CAACAGATCTCCAGAGGTGGTGCAGAAACGACCCCGCGCCG CAACAGATCTCCAGAGGTGGTACAGAAACGACCCCGCGCCG < 41bp 0.476663716196613 0.824437093583329 0.30950594 0.788066 prediction 0.648874187166658 Functional Gain - TRH ENSG00000170893 UTR5 Human protein_coding chr3:129693336 chr3:129693337 . . 0 22 hPsi_associated_SNPs_28682 0 0 0 0 0 Cytosol 0.438718621288963 0.438718572585542 0.576132 0 hPsi_site_22406 iPseU_CNN:0.576132;iRNA_PseU:0 22407 chr20 42161469 42161469 1 + G A SKCM 42161468 + 42161448 42161488 41 GCTGGAGGCTGTTGACCGCATGAACCCGTCCCTTGTCTGCG GCTGGAGGCTGTTGACCGCATAAACCCGTCCCTTGTCTGCG < 41bp 0.401007881486038 0.824432027427626 0.33438393 0.55930394 prediction 0.648864054855251 Functional Gain - L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42161468 chr20:42161469 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28683 0 0 1 0 2 Nucleus 0.43801363643944 0.438711659268265 0.11860788 0 hPsi_site_22407 iPseU_CNN:0.11860788;iRNA_PseU:0 22408 chr15 43476493 43476493 1 + G A UCEC 43476492 + 43476472 43476512 41 CATCCCCTTGATGGCTTACATGTGTTGGAGCTTGCTGCAGC CATCCCCTTGATGGCTTACATATGTTGGAGCTTGCTGCAGC < 41bp 0.572007286950962 0.896432202033944 0.2584831 0.43852472 prediction 0.648849830165963 Functional Gain - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43476492 chr15:43476493 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_28684 0 0 1 0 1 chromatin 0.440314948844145 0.440692367050844 0 0 hPsi_site_22408 iPseU_CNN:0;iRNA_PseU:0 22409 chr16 817420 817420 1 + G A STAD 817419 + 817399 817439 41 AAGGCGCTCAGTCAGCAGAATGTGAGCATGGACTTGGCCAC AAGGCGCTCAGTCAGCAGAATATGAGCATGGACTTGGCCAC < 41bp 0.419813011191163 0.824417470510846 0.30753946 0.3899203 prediction 0.648834941021692 Functional Gain - MSLN ENSG00000102854 CDS Human protein_coding chr16:817419 chr16:817420 nonsynonymous SNV 0.971 3 22 hPsi_associated_SNPs_28685 0 0 0 0 2 nucleus 0.438723187199696 0.438721482088465 0 0 hPsi_site_22409 iPseU_CNN:0;iRNA_PseU:0 22410 chr1 28863285 28863285 1 + G A THCA 28863284 + 28863264 28863304 41 GCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCTGGGCCT GCATACAGCCTGGGCCGGGCTAAGTATGGGCGGCTGGGCCT < 41bp 0.394351706905348 0.824412330044129 0.25206184 0.33909824 prediction 0.648824660088258 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28863284 chr1:28863285 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28686 0 0 1 0 1 Ribosome 0.437941600883774 0.438718599331795 0 0 hPsi_site_22410 iPseU_CNN:0;iRNA_PseU:0 22411 chr11 60274254 60274254 1 + C A UCEC 60274253 + 60274233 60274273 41 GATCTTCTCCCTCTTGGAGTTCTTCGTAGCTTGTGCCACAG GATCTTCTCCCTCTTGGAGTTATTCGTAGCTTGTGCCACAG < 41bp 0.536238648327999 0.860650251496418 0.28243035 0.81480885 prediction 0.648823206336837 Functional Gain - MS4A12 ENSG00000071203 CDS Human protein_coding chr11:60274253 chr11:60274254 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_28687 0 0 0 0 2 unknown 0.438788902704827 0.438716781805076 0.6296177 0 hPsi_site_22411 iPseU_CNN:0.6296177;iRNA_PseU:0 22412 chr4 661650 661650 1 + C A GBM 661649 + 661629 661669 41 TCTCGACTCCCCTCAGGAGTTCTCTCGTTTCCACGAAGAGA TCTCGACTCCCCTCAGGAGTTATCTCGTTTCCACGAAGAGA < 41bp 0.462483720253606 0.82440795494578 0.60174686 0.72025734 prediction 0.648815909891561 Functional Gain - PDE6B ENSG00000133256 CDS Human protein_coding chr4:661649 chr4:661650 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_28688 0 0 0 0 1 Nucleus 0.438718294759578 0.438718648696205 0.23702096 0 hPsi_site_22412 iPseU_CNN:0.23702096;iRNA_PseU:0 22413 chr2 102968291 102968291 1 + C A COAD 102968290 + 102968270 102968310 41 AAGGTCCCTGAATTCTAAATTCTGGAAGCACGTGAGGTACC AAGGTCCCTGAATTCTAAATTATGGAAGCACGTGAGGTACC < 41bp 0.526205029044934 0.850612689389755 0.26184738 0.2858237 prediction 0.648815320689642 Functional Gain - IL1RL1 ENSG00000115602 CDS Human protein_coding chr2:102968290 chr2:102968291 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_28689 0 0 0 0 0 Endoplasmic reticulum 0.438718592995102 0.43871753614658 0 0 hPsi_site_22413 iPseU_CNN:0;iRNA_PseU:0 22414 chr12 53691682 53691682 1 + G A STAD 53691681 + 53691661 53691701 41 GTGGAACACGTGCTCATCGATGTGGGAACTGGGTACTATGT GTGGAACACGTGCTCATCGATATGGGAACTGGGTACTATGT < 41bp 0.426080780563044 0.824402107356025 0.662354 0.74470556 prediction 0.648804214712051 Functional Gain - PFDN5 ENSG00000123349 CDS Human protein_coding chr12:53691681 chr12:53691682 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_28690 0 0 1 0 2 Ribosome 0.43861412813426 0.438746183769263 0.16470312 0 hPsi_site_22414 iPseU_CNN:0.16470312;iRNA_PseU:0 22415 chr1 39494585 39494585 1 + C A COAD 39494584 + 39494564 39494604 41 CAAGATAGAATATGATGATTTCGTAGAGTGTTTGCTTCGGC CAAGATAGAATATGATGATTTAGTAGAGTGTTTGCTTCGGC < 41bp 0.472433829185998 0.824391372395328 0.34080774 0.51273644 prediction 0.648782744790656 Functional Gain - NDUFS5 ENSG00000168653 CDS Human protein_coding chr1:39494584 chr1:39494585 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28691 0 0 1 0 1 Ribosome 0.438720558751047 0.438718176014065 0.0254728799999999 0 hPsi_site_22415 iPseU_CNN:0.0254728799999999;iRNA_PseU:0 22416 chrX 32503127 32503127 1 + G A ESCA 32503126 + 32503106 32503146 41 AAAGTCTGCATCCAGGAACATGGGTCCTTGTCCTTTCTCTT AAAGTCTGCATCCAGGAACATAGGTCCTTGTCCTTTCTCTT < 41bp 0.546523885744169 0.870914951911311 0.2948776 0.34311396 prediction 0.648782132334284 Functional Gain - DMD ENSG00000198947 CDS Human protein_coding chrX:32503126 chrX:32503127 synonymous SNV . 0 22 hPsi_associated_SNPs_28692 0 0 0 0 0 chromatin 0.438718546627107 0.43871868889503 0 0 hPsi_site_22416 iPseU_CNN:0;iRNA_PseU:0 22417 chr1 9784049 9784049 1 + G A BLCA 9784048 + 9784028 9784068 41 GAGGCCCTGGATCGAGCCATTGAGGAGTTCACCCTCTCCTG GAGGCCCTGGATCGAGCCATTAAGGAGTTCACCCTCTCCTG < 41bp 0.403288203453847 0.824389948978167 0.2306264 0.4181179 prediction 0.648779897956334 Functional Gain - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9784048 chr1:9784049 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_28693 0 0 1 0 1 Nucleus 0.438718593310891 0.438718592995102 0 0 hPsi_site_22417 iPseU_CNN:0;iRNA_PseU:0 22418 chr8 125463937 125463937 1 + G A rs148858836 125463936 + 125463916 125463956 41 TTGCCTTTCCTAGTTCATGCTGGTGCTGCCTTCGTCCATGC TTGCCTTTCCTAGTTCATGCTAGTGCTGCCTTCGTCCATGC < 41bp 0.42656497801678 0.824388946408281 0.18318647 0.28192163 prediction 0.648777892816562 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125463936 chr8:125463937 nonsynonymous SNV 0.991 0 22 hPsi_associated_SNPs_28694 0 0 1 0 0 Cytosol 0.438718448203659 0.438718554584044 0 0 hPsi_site_22418 iPseU_CNN:0;iRNA_PseU:0 22419 chrX 107084007 107084007 1 + G A LUAD 107084006 + 107083986 107084026 41 CCAATCTGCCTAGAGTTGTTTGAAGACCCCCTTCTGCTCCC CCAATCTGCCTAGAGTTGTTTAAAGACCCCCTTCTGCTCCC < 41bp 0.57707318224232 0.901455558536208 0.3350888 0.616354 prediction 0.648764752587776 Functional Gain - MID2 ENSG00000080561 CDS Human protein_coding chrX:107084006 chrX:107084007 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28695 0 0 1 0 0 nucleus 0.438718592993348 0.438718518313676 0.232708 0 hPsi_site_22419 iPseU_CNN:0.232708;iRNA_PseU:0 22420 chr1 248366576 248366576 1 + G A SKCM 248366575 + 248366555 248366595 41 CCTCAGCCAACTGTCCCTCATGGACCTCATGCTCATCTGCA CCTCAGCCAACTGTCCCTCATAGACCTCATGCTCATCTGCA < 41bp 0.43140671444353 0.824381759587071 0.24851441 0.4662649 prediction 0.648763519174142 Functional Gain - OR2M3 ENSG00000228198 CDS Human protein_coding chr1:248366575 chr1:248366576 nonsynonymous SNV 0.296 0 22 hPsi_associated_SNPs_28696 0 0 0 0 0 exosome 0.438718569659397 0.437581906920212 0 0 hPsi_site_22420 iPseU_CNN:0;iRNA_PseU:0 22421 chr2 31489529 31489529 1 + G T SARC 31489528 + 31489508 31489548 41 GAGCTGCCCAACGAGCTGCCTGCCCACCTCCTGCCCCCGTC GAGCTGCCCAACGAGCTGCCTTCCCACCTCCTGCCCCCGTC < 41bp 0.512392538385992 0.83677286485566 0.30605578 0.5941894 prediction 0.648760652939336 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31489528 chr2:31489529 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_28697 0 0 1 0 0 exosome 0.438719222641619 0.438797720183809 0.1883788 0 hPsi_site_22421 iPseU_CNN:0.1883788;iRNA_PseU:0 22422 chr11 51515943 51515943 1 + G A COAD 51515942 + 51515922 51515962 41 TCTCCTATGTGGTCATCTTGTGCTCCCTAAGGACTCATAGC TCTCCTATGTGGTCATCTTGTACTCCCTAAGGACTCATAGC < 41bp 0.428978941986261 0.824370491415013 0.3144155 0.6797668 prediction 0.648740982830025 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515942 chr11:51515943 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28698 0 0 0 0 0 unknown 0.443755945838595 0.436778148453707 0.3595336 0 hPsi_site_22422 iPseU_CNN:0.3595336;iRNA_PseU:0 22423 chr10 118957050 118957050 1 + G A rs149451689 118957049 + 118957029 118957069 41 GAGATGCTGCCCAGAGGCCCTGGGAAAGCTCTTCCCTGGCC GAGATGCTGCCCAGAGGCCCTAGGAAAGCTCTTCCCTGGCC < 41bp 0.568421719859071 0.892791038506767 0.20551011 0.2947206 prediction 0.648738637295392 Functional Gain - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118957049 chr10:118957050 synonymous SNV . 0 22 hPsi_associated_SNPs_28699 0 0 0 0 0 unknown 0.438718592995102 0.438718592968464 0 0 hPsi_site_22423 iPseU_CNN:0;iRNA_PseU:0 22424 chr17 40174546 40174546 1 + G T SARC 40174545 + 40174525 40174565 41 GGGCCGAACTGCCCCGACACTGCTTCTCTTGCACTGATGGC GGGCCGAACTGCCCCGACACTTCTTCTCTTGCACTGATGGC < 41bp 0.520389405926368 0.844757409119484 0.2539382 0.30252028 prediction 0.648736006386232 Functional Gain - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40174545 chr17:40174546 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_28700 0 0 1 0 0 Cytosol 0.438824594631734 0.435657833523935 0 0 hPsi_site_22424 iPseU_CNN:0;iRNA_PseU:0 22425 chr10 96971644 96971644 1 + G A SKCM 96971643 + 96971623 96971663 41 CTTTCTCTTTAGACGGTGGATGGATCTCCAGCCAACAGATG CTTTCTCTTTAGACGGTGGATAGATCTCCAGCCAACAGATG < 41bp 0.412001003910071 0.824365679008273 0.30556434 0.51198936 prediction 0.648731358016546 Functional Gain - ACSM6 ENSG00000173124 CDS Human protein_coding chr10:96971643 chr10:96971644 nonsynonymous SNV 0.574 0 22 hPsi_associated_SNPs_28701 0 0 0 0 1 exosome 0.438718592995097 0.438718592937875 0.0239787199999999 0 hPsi_site_22425 iPseU_CNN:0.0239787199999999;iRNA_PseU:0 22426 chr1 235590489 235590489 1 + G T LUSC 235590488 + 235590468 235590508 41 AGATTTGTCAAAAAACCTGTTGTCATCATGGGATGAAGTGA AGATTTGTCAAAAAACCTGTTTTCATCATGGGATGAAGTGA < 41bp 0.496947689763864 0.824365111970366 0.19231924 0.31380057 prediction 0.648730223940731 Functional Gain - TBCE ENSG00000116957 CDS Human protein_coding chr1:235590488 chr1:235590489 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_28702 0 0 1 0 2 chromatin 0.4388120849342 0.440095765243497 0 0 hPsi_site_22426 iPseU_CNN:0;iRNA_PseU:0 22427 chrX 1712489 1712489 1 + C A LUSC 1712488 + 1712468 1712508 41 AGCTGAAGCAGCCGGGGAAGTCCATCTCCAACTGGGAGGTG AGCTGAAGCAGCCGGGGAAGTACATCTCCAACTGGGAGGTG < 41bp 0.457172603118065 0.824360912298012 0.22568452 0.72716343 prediction 0.648721824596023 Functional Gain - AKAP17A ENSG00000197976 CDS Human protein_coding chrX:1712488 chrX:1712489 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_28703 0 0 1 0 0 nucleolus 0.438718593004676 0.438718592995061 0.45432686 0 hPsi_site_22427 iPseU_CNN:0.45432686;iRNA_PseU:0 22428 chr7 45108139 45108139 1 + G T LUAD 45108138 + 45108118 45108158 41 GGAGAGTGCAGTTGGGCCCGTGGAGGCATGCTGCCTGGTCA GGAGAGTGCAGTTGGGCCCGTTGAGGCATGCTGCCTGGTCA < 41bp 0.493886077609366 0.824360750007032 0.20834166 0.25821388 prediction 0.648721500014065 Functional Gain - CCM2 ENSG00000136280 CDS Human protein_coding chr7:45108138 chr7:45108139 synonymous SNV . 0 22 hPsi_associated_SNPs_28704 0 0 1 0 2 Ribosome 0.438712662645292 0.439626690916089 0 0 hPsi_site_22428 iPseU_CNN:0;iRNA_PseU:0 22429 chr2 48026375 48026375 1 + C A GBM 48026374 + 48026354 48026394 41 GGAAGTGGTGGCAGATTAAGTCTCAGAACTTTGATCTTGTC GGAAGTGGTGGCAGATTAAGTATCAGAACTTTGATCTTGTC < 41bp 0.541631027814158 0.865986049092674 0.2213732 0.31842285 prediction 0.648710042557031 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026374 chr2:48026375 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28705 0 0 1 0 0 Nucleus 0.438577641046644 0.438718982138246 0 0 hPsi_site_22429 iPseU_CNN:0;iRNA_PseU:0 22430 chrX 54957706 54957706 1 + C A UCEC 54957705 + 54957685 54957725 41 TCCCATGGAGCCAAAGTACATCCTTGGAATCTTTGTCCACA TCCCATGGAGCCAAAGTACATACTTGGAATCTTTGTCCACA < 41bp 0.524373186491188 0.848726593632622 0.2834224 0.6025984 prediction 0.648706814282869 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54957705 chrX:54957706 nonsynonymous SNV 0.902 1 22 hPsi_associated_SNPs_28706 0 0 1 0 1 exosome 0.438718592995102 0.438718592994405 0.2051968 0 hPsi_site_22430 iPseU_CNN:0.2051968;iRNA_PseU:0 22431 chr14 20249099 20249099 1 + C A COAD 20249098 + 20249078 20249118 41 GATCTGTAGTAGTGGTCTGATCTCTGTGGTGTGTTTCATTG GATCTGTAGTAGTGGTCTGATATCTGTGGTGTGTTTCATTG < 41bp 0.512228559946866 0.83658150119566 0.3384821 0.3932534 prediction 0.648705882497587 Functional Gain - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20249098 chr14:20249099 synonymous SNV . 0 22 hPsi_associated_SNPs_28707 0 0 0 0 0 unknown 0.464237657606138 0.440492564052346 0 0 hPsi_site_22431 iPseU_CNN:0;iRNA_PseU:0 22432 chr15 50474726 50474726 1 + G A BLCA 50474725 + 50474705 50474745 41 CCAGGACATAGGCTACTTCTTGAAGGTGGCCGCCGTGGGCC CCAGGACATAGGCTACTTCTTAAAGGTGGCCGCCGTGGGCC < 41bp 0.415570349936854 0.824350277634953 0.25912702 0.48912373 prediction 0.648700555269907 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50474725 chr15:50474726 synonymous SNV . 0 22 hPsi_associated_SNPs_28708 0 0 1 0 0 Ribosome 0.438718592988392 0.438718592995094 0 0 hPsi_site_22432 iPseU_CNN:0;iRNA_PseU:0 22433 chr5 79616221 79616221 1 + C T rs199574223 79616222 - 79616202 79616242 41 TAAACTTCTGTGCAGTCTGTTGTTCTGTAACTTGATGGCTG TAAACTTCTGTGCAGTCTGTTATTCTGTAACTTGATGGCTG < 41bp 0.447799838741073 0.824349631519339 0.5237823 0.62601924 prediction 0.648699263038678 Functional Gain - SPZ1 ENSG00000164299 CDS Human protein_coding chr5:79616222 chr5:79616221 stopgain 0.002 0 22 hPsi_associated_SNPs_28709 0 0 0 0 0 unknown 0.450488264542625 0.443721554416742 0.20447388 0 hPsi_site_22433 iPseU_CNN:0.20447388;iRNA_PseU:0 22434 chr22 32756289 32756289 1 + G A HNSC 32756288 + 32756268 32756308 41 AACAACTTCCTCCTCATTTCTGACGACCTCAGGAGCGTCCG AACAACTTCCTCCTCATTTCTAACGACCTCAGGAGCGTCCG < 41bp 0.411244883744586 0.824348200748792 0.23807523 0.35638717 prediction 0.648696401497585 Functional Gain - RFPL3 ENSG00000128276 CDS Human protein_coding chr22:32756288 chr22:32756289 nonsynonymous SNV 0.011 0 22 hPsi_associated_SNPs_28710 0 0 0 0 1 exosome 0.438707236117913 0.438716963215091 0 0 hPsi_site_22434 iPseU_CNN:0;iRNA_PseU:0 22435 chr11 51516089 51516089 1 + G A STAD 51516088 + 51516068 51516108 41 TTACCTATTGATAAAGCAGTTGCTATATTCTACACTATGAT TTACCTATTGATAAAGCAGTTACTATATTCTACACTATGAT < 41bp 0.548379124917175 0.872721828880776 0.20879179 0.29192555 prediction 0.648685407927203 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51516088 chr11:51516089 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_28711 0 0 0 0 0 unknown 0.43876627463033 0.438751754901154 0 0 hPsi_site_22435 iPseU_CNN:0;iRNA_PseU:0 22436 chr6 29365162 29365162 1 + C A READ 29365161 + 29365141 29365181 41 ATCTCTTCTTCAAGACCCGTTCTTGTAGCATGCTCTGTAAA ATCTCTTCTTCAAGACCCGTTATTGTAGCATGCTCTGTAAA < 41bp 0.530781979290358 0.855122082626389 0.3330577 0.40617618 prediction 0.648680206672062 Functional Gain - OR12D2 ENSG00000168787 CDS Human other chr6:29365161 chr6:29365162 nonsynonymous SNV 0.002 4 22 hPsi_associated_SNPs_28712 0 0 0 0 0 unknown 0.438719145680246 0.438437418405951 0 0 hPsi_site_22436 iPseU_CNN:0;iRNA_PseU:0 22437 chr1 162769680 162769680 1 + G A STAD 162769679 + 162769659 162769699 41 CCCTACAGCTCTTCCAAATATGCCACTGACCTTTTGAGTGT CCCTACAGCTCTTCCAAATATACCACTGACCTTTTGAGTGT < 41bp 0.570434248313713 0.89477201436978 0.2308242 0.22457752 prediction 0.648675532112134 Functional Gain - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162769679 chr1:162769680 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_28713 0 0 1 1 1 Endoplasmic reticulum 0.438717314707058 0.438717818271911 0 0 hPsi_site_22437 iPseU_CNN:0;iRNA_PseU:0 22438 chr9 71152347 71152347 1 + G A LGG 71152346 + 71152326 71152366 41 ATGCCAGAGGCCTCTCTCTCTGCAGGACAGCTCTGCTTTTC ATGCCAGAGGCCTCTCTCTCTACAGGACAGCTCTGCTTTTC < 41bp 0.425831412081205 0.824333372954535 0.35743475 0.58309644 prediction 0.648666745909069 Functional Gain - TMEM252 ENSG00000181778 CDS Human protein_coding chr9:71152346 chr9:71152347 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_28714 0 0 0 0 0 exosome 0.438193131351255 0.438609384628889 0.16619288 0 hPsi_site_22438 iPseU_CNN:0.16619288;iRNA_PseU:0 22439 chr1 222900525 222900525 1 + C T UCEC 222900526 - 222900506 222900546 41 GGAGCATGTTTTAGTTCAATTGCTCGAGCAATTGTTACTGT GGAGCATGTTTTAGTTCAATTACTCGAGCAATTGTTACTGT < 41bp 0.442464808000317 0.824330096223464 0.18291411 0.5211483 prediction 0.648660192446929 Functional Gain - BROX ENSG00000162819 CDS Human protein_coding chr1:222900526 chr1:222900525 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28715 0 0 0 0 0 cytosol 0.438705968964189 0.439910605082939 0.0422966 0 hPsi_site_22439 iPseU_CNN:0.0422966;iRNA_PseU:0 22440 chr17 7803987 7803987 1 + C A UCEC 7803986 + 7803966 7804006 41 GCGGAGACTCAAGGCAGATGTCTTTAAGAACATGCCAGCCA GCGGAGACTCAAGGCAGATGTATTTAAGAACATGCCAGCCA < 41bp 0.552732637787891 0.877060852995811 0.2654041 0.46323338 prediction 0.64865643041584 Functional Gain - CHD3 ENSG00000170004 CDS Human protein_coding chr17:7803986 chr17:7803987 synonymous SNV . 0 22 hPsi_associated_SNPs_28716 0 0 1 0 1 Cytosol 0.438717967430898 0.438716193090297 0 0 hPsi_site_22440 iPseU_CNN:0;iRNA_PseU:0 22441 chr1 53679231 53679231 1 + G A rs78266699 53679230 + 53679210 53679250 41 GGAGAAGGCCTTAGAAGACATGTTTGATGCCTTAGAAGGCA GGAGAAGGCCTTAGAAGACATATTTGATGCCTTAGAAGGCA < 41bp 0.569812694722117 0.894137615102685 0.6084358 0.57654655 prediction 0.648649840761137 Functional Gain - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53679230 chr1:53679231 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_28717 0 0 1 0 0 Ribosome 0.438718592995157 0.438718592995214 0 0 hPsi_site_22441 iPseU_CNN:0;iRNA_PseU:0 22442 chr4 187209741 187209741 1 + G T UCEC 187209742 - 187209722 187209762 41 TGCTTGAGTTTTCTCCAGAATCCAGTCCACGTACTCGACCA TGCTTGAGTTTTCTCCAGAATACAGTCCACGTACTCGACCA < 41bp 0.512920668973578 0.837245374885291 0.37108186 0.64274824 prediction 0.648649411823426 Functional Gain - F11 ENSG00000088926 CDS Human protein_coding chr4:187209742 chr4:187209741 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28718 0 0 0 0 0 cytosol 0.438585300834774 0.438715719947498 0.28549648 0 hPsi_site_22442 iPseU_CNN:0.28549648;iRNA_PseU:0 22443 chr11 56113841 56113841 1 + C A UCEC 56113840 + 56113820 56113860 41 GTATGCCACTCAGCTAGCATTCTTTGAGATTTTCATCATCT GTATGCCACTCAGCTAGCATTATTTGAGATTTTCATCATCT < 41bp 0.515473131557801 0.839790141794272 0.30671003 0.35411945 prediction 0.648634020472942 Functional Gain - OR8K1 ENSG00000150261 CDS Human protein_coding chr11:56113840 chr11:56113841 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_28719 0 0 0 0 0 unknown 0.438761323592126 0.438740727498265 0 0 hPsi_site_22443 iPseU_CNN:0;iRNA_PseU:0 22444 chr17 7752400 7752400 1 + G A LUAD 7752399 + 7752379 7752419 41 GTGGAGCGGGTGGGCCGGAGTGCCACTGACCCAGCCGACCC GTGGAGCGGGTGGGCCGGAGTACCACTGACCCAGCCGACCC < 41bp 0.404988274390774 0.824316645582513 0.31119025 0.8111874 prediction 0.648633291165026 Functional Gain - KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752399 chr17:7752400 nonsynonymous SNV 0.553 1 22 hPsi_associated_SNPs_28720 0 0 1 0 0 Cytosol 0.438721071623527 0.438570523272105 0.6223748 0 hPsi_site_22444 iPseU_CNN:0.6223748;iRNA_PseU:0 22445 chr5 180661389 180661389 1 + G A rs199856718 180661388 + 180661368 180661408 41 CGGGGCTGGGCGGTGGGTGCTGCCCGTGAATCAACCCATCA CGGGGCTGGGCGGTGGGTGCTACCCGTGAATCAACCCATCA < 41bp 0.542997700456072 0.86731171030647 0.2085999 0.7588098 prediction 0.648628019700797 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180661388 chr5:180661389 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_28721 0 0 1 0 0 chromatin 0.43870484190468 0.438695803687241 0.5176196 0 hPsi_site_22445 iPseU_CNN:0.5176196;iRNA_PseU:0 22446 chr1 159175632 159175632 1 + G A LUAD 159175631 + 159175611 159175651 41 CTGTGTAGCCTGGGCTACTGTGTCTGGTATGGCTCAGCCTT CTGTGTAGCCTGGGCTACTGTATCTGGTATGGCTCAGCCTT < 41bp 0.576700581389954 0.90101088850717 0.23710766 0.38080412 prediction 0.648620614234434 Functional Gain - ACKR1 ENSG00000213088 CDS Human protein_coding chr1:159175631 chr1:159175632 nonsynonymous SNV 0.030 2 22 hPsi_associated_SNPs_28722 0 0 0 0 0 Endoplasmic reticulum 0.4387178012283 0.438718590908055 0 0 hPsi_site_22446 iPseU_CNN:0;iRNA_PseU:0 22447 chr2 149542457 149542457 1 + C A UCEC 149542456 + 149542436 149542476 41 TTCTCCAGTCAATGTGCATATCAATACACGGACTTCAGCAC TTCTCCAGTCAATGTGCATATAAATACACGGACTTCAGCAC < 41bp 0.46855935185663 0.824307970144819 0.2610501 0.34051296 prediction 0.648615940289638 Functional Gain - EPC2 ENSG00000135999 CDS Human protein_coding chr2:149542456 chr2:149542457 synonymous SNV . 0 22 hPsi_associated_SNPs_28723 0 0 1 0 0 Cytosol 0.443309650994551 0.443733179238872 0 0 hPsi_site_22447 iPseU_CNN:0;iRNA_PseU:0 22448 chr14 101537808 101537808 1 + G A rs186109847 101537807 + 101537787 101537827 41 ATGAATGCATCAGGGACTCCTGCTTCCTGCCCAGAGCCCCC ATGAATGCATCAGGGACTCCTACTTCCTGCCCAGAGCCCCC < 41bp 0.419239990145791 0.824306239002744 0.1734556 0.27964288 prediction 0.648612478005487 Functional Gain - MEG9 ENSG00000223403 ncRNA_exonic Human lincRNA chr14:101537807 chr14:101537808 . . 0 22 hPsi_associated_SNPs_28724 0 0 0 0 0 unknown 0.438720050966033 0.438930697389928 0 0 hPsi_site_22448 iPseU_CNN:0;iRNA_PseU:0 22449 chr9 97321243 97321243 1 + G A COAD 97321242 + 97321222 97321262 41 AGCTGCCTGCCTGATTTTTCTGCACACAGGTGAGATATTCC AGCTGCCTGCCTGATTTTTCTACACACAGGTGAGATATTCC < 41bp 0.562973372261573 0.887278983458464 0.29273587 0.35956365 prediction 0.648611222393782 Functional Gain - FBP2 ENSG00000130957 CDS Human protein_coding chr9:97321242 chr9:97321243 stopgain 0.821 0 22 hPsi_associated_SNPs_28725 0 0 0 0 0 exosome 0.438716507771273 0.438716977892505 0 0 hPsi_site_22449 iPseU_CNN:0;iRNA_PseU:0 22450 chr6 31540606 31540606 1 + G A UCEC 31540605 + 31540585 31540625 41 GGGGCTGCTGCTGGTTCTGCTGCCTGGGGCCCAGGTGAGGC GGGGCTGCTGCTGGTTCTGCTACCTGGGGCCCAGGTGAGGC < 41bp 0.475829371790285 0.824304450054878 0.15126038 0.33791202 prediction 0.648608900109756 Functional Gain - LTA ENSG00000226979 CDS Human protein_coding chr6:31540605 chr6:31540606 synonymous SNV . 0 22 hPsi_associated_SNPs_28726 0 0 0 0 2 exosome 0.438718600718595 0.438718371803949 0 0 hPsi_site_22450 iPseU_CNN:0;iRNA_PseU:0 22451 chr1 232943748 232943748 1 + G A HNSC 232943747 + 232943727 232943767 41 GTCACCACAAACATCCCAGGTGAGTTCTTACCTGCCTTCAA GTCACCACAAACATCCCAGGTAAGTTCTTACCTGCCTTCAA < 41bp 0.450224462880298 0.824302951458477 0.20017222 0.6208119 prediction 0.648605902916955 Functional Gain - MAP10 ENSG00000212916 CDS Human protein_coding chr1:232943747 chr1:232943748 synonymous SNV . 0 22 hPsi_associated_SNPs_28727 0 0 0 0 0 exosome 0.438598636462329 0.438709396503561 0.2416238 0 hPsi_site_22451 iPseU_CNN:0.2416238;iRNA_PseU:0 22452 chr21 35467981 35467981 1 + G A COAD 35467980 + 35467960 35468000 41 GGTTGGAATCTTTATGTGTCTGTCATCCTGCTCATTGGCAT GGTTGGAATCTTTATGTGTCTATCATCCTGCTCATTGGCAT < 41bp 0.562030406840833 0.886330102752001 0.31138408 0.52954584 prediction 0.648599391822336 Functional Gain - SLC5A3 ENSG00000198743;ENSG00000272962 CDS Human other chr21:35467980 chr21:35467981 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_28728 0 0 1 0 0 Nucleus 0.438754020286475 0.438914307800295 0.0590916800000001 0 hPsi_site_22452 iPseU_CNN:0.0590916800000001;iRNA_PseU:0 22453 chr19 30936203 30936203 1 + G A COAD 30936202 + 30936182 30936222 41 AGATGGCTCCAAGCAGAAAATGCCTGCTGATTTGGTTCACA AGATGGCTCCAAGCAGAAAATACCTGCTGATTTGGTTCACA < 41bp 0.420214661245566 0.824298328220103 0.302139 0.44519794 prediction 0.648596656440207 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936202 chr19:30936203 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28729 0 0 1 0 0 exosome 0.438716103214784 0.438718518636631 0 0 hPsi_site_22453 iPseU_CNN:0;iRNA_PseU:0 22454 chr19 2790547 2790547 1 + G A BLCA 2790546 + 2790526 2790566 41 GAGCAGACCAAGCGCGTGTATGACCAGGTTGGCACCCAGGA GAGCAGACCAAGCGCGTGTATAACCAGGTTGGCACCCAGGA < 41bp 0.400069668265333 0.824297171302122 0.32126188 0.4527928 prediction 0.648594342604244 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2790546 chr19:2790547 nonsynonymous SNV 0.481 1 22 hPsi_associated_SNPs_28730 0 0 1 0 1 Ribosome 0.438723687249573 0.438723446939518 0 0 hPsi_site_22454 iPseU_CNN:0;iRNA_PseU:0 22455 chrX 48542810 48542810 1 + C A LUSC 48542809 + 48542789 48542829 41 TTCATCCGCCTTTACGGCCTTCAGGTGACCCCCCCACCCCC TTCATCCGCCTTTACGGCCTTAAGGTGACCCCCCCACCCCC < 41bp 0.546754084919345 0.87104860518219 0.2502433 0.36377525 prediction 0.64858904052569 Functional Gain - WAS ENSG00000015285 CDS Human protein_coding chrX:48542809 chrX:48542810 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_28731 0 0 0 0 1 Endoplasmic reticulum 0.438718593013937 0.438718591573535 0 0 hPsi_site_22455 iPseU_CNN:0;iRNA_PseU:0 22456 chr2 207027515 207027515 1 + G A LUAD 207027514 + 207027494 207027534 41 ATACAGTGTGTAGTTGAAGATGATAAAGTTGGAACAGATAT ATACAGTGTGTAGTTGAAGATAATAAAGTTGGAACAGATAT < 41bp 0.430067384027709 0.824292827814836 0.26611054 0.29893628 prediction 0.648585655629673 Functional Gain - EEF1B2 ENSG00000114942 CDS Human protein_coding chr2:207027514 chr2:207027515 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_28732 0 0 0 0 1 chromatin 0.438681102291499 0.438176155258052 0 0 hPsi_site_22456 iPseU_CNN:0;iRNA_PseU:0 22457 chr10 28966889 28966889 1 + G A CESC 28966888 + 28966868 28966908 41 GGAGCTCTGCGCCATGGCCGTGCTGCTCACCAAAGGTGGGT GGAGCTCTGCGCCATGGCCGTACTGCTCACCAAAGGTGGGT < 41bp 0.450429757977204 0.824291151814137 0.2505542 0.9463598 prediction 0.648582303628275 Functional Gain - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28966888 chr10:28966889 synonymous SNV . 0 22 hPsi_associated_SNPs_28733 0 0 1 0 1 Ribosome 0.43593678479472 0.438650385746368 0.8927196 0 hPsi_site_22457 iPseU_CNN:0.8927196;iRNA_PseU:0 22458 chr19 50169168 50169168 1 + G A THCA 50169167 + 50169147 50169187 41 TGGGAGCGTCACATGCAAATTGAGCGTGCACCCAGCGTTCC TGGGAGCGTCACATGCAAATTAAGCGTGCACCCAGCGTTCC < 41bp 0.56530415485424 0.889592226290216 0.3192708 0.7874311 prediction 0.648576142871953 Functional Gain - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50169167 chr19:50169168 nonsynonymous SNV 0.027 0 22 hPsi_associated_SNPs_28734 0 0 0 0 0 Ribosome 0.438716608721713 0.438717786050961 0.5748622 0 hPsi_site_22458 iPseU_CNN:0.5748622;iRNA_PseU:0 22459 chr9 35860552 35860552 1 + G A rs186902023 35860551 + 35860531 35860571 41 GGCAGGTGGGTAATGGATGATGCTCACCTAGTGTTCCTTGG GGCAGGTGGGTAATGGATGATACTCACCTAGTGTTCCTTGG < 41bp 0.472855058033831 0.824287812722053 0.472245 0.87072104 prediction 0.648575625444106 Functional Gain - LINC00950 ENSG00000236083 upstream Human unitary_pseudogene chr9:35860551 chr9:35860552 . . 0 22 hPsi_associated_SNPs_28735 0 0 0 0 0 unknown 0.438718606883663 0.438718630104566 0.74144208 0 hPsi_site_22459 iPseU_CNN:0.74144208;iRNA_PseU:0 22460 chr15 34635597 34635597 1 + G A rs75061777 34635596 + 34635576 34635616 41 GACGTATAGAAGCCTGTCTTTGTCTCAAGATACACACCCAT GACGTATAGAAGCCTGTCTTTATCTCAAGATACACACCCAT < 41bp 0.440421715977229 0.824272978228564 0.6298923 0.7656845 prediction 0.648545956457128 Functional Gain - NUTM1 ENSG00000184507 UTR5 Human protein_coding chr15:34635596 chr15:34635597 . . 0 22 hPsi_associated_SNPs_28736 0 0 0 0 0 exosome 0.438719973596582 0.438719002065597 0.2715844 0 hPsi_site_22460 iPseU_CNN:0.2715844;iRNA_PseU:0 Diastolic blood pressure 22461 chr13 20237231 20237231 1 + G A STAD 20237230 + 20237210 20237250 41 GAAGCAGGAGCTTTTGTAAATGTCCAGCAAAGCAATGGTGA GAAGCAGGAGCTTTTGTAAATATCCAGCAAAGCAATGGTGA < 41bp 0.40792720189215 0.824263167186803 0.33359608 0.52392995 prediction 0.648526334373606 Functional Gain - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20237230 chr13:20237231 nonsynonymous SNV 0.877 0 22 hPsi_associated_SNPs_28737 0 0 1 0 2 Ribosome 0.438718723595249 0.438718615902242 0.0478599 0 hPsi_site_22461 iPseU_CNN:0.0478599;iRNA_PseU:0 22462 chr12 88570062 88570062 1 + G A LUAD 88570061 + 88570041 88570081 41 AAAGAACTTTGAGAGAGCTTTGAAATACTTCTTACAGGCTA AAAGAACTTTGAGAGAGCTTTAAAATACTTCTTACAGGCTA < 41bp 0.432319832698364 0.824262770092171 0.34929517 0.52642494 prediction 0.648525540184342 Functional Gain - TMTC3 ENSG00000139324 CDS Human protein_coding chr12:88570061 chr12:88570062 synonymous SNV . 0 22 hPsi_associated_SNPs_28738 0 0 1 4 2 Nucleus 0.439286497958443 0.438829506069699 0.0528498799999999 0 hPsi_site_22462 iPseU_CNN:0.0528498799999999;iRNA_PseU:0 22463 chr7 100469339 100469339 1 + C A BLCA 100469338 + 100469318 100469358 41 ATCCACTGCATTGAGGACTTTCACAGGTCAGGCCTGGCCTC ATCCACTGCATTGAGGACTTTAACAGGTCAGGCCTGGCCTC < 41bp 0.461209915627752 0.824258959710345 0.22778168 0.3940159 prediction 0.64851791942069 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100469338 chr7:100469339 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_28739 0 0 1 0 1 Ribosome 0.438718592869677 0.438718592995102 0 0 hPsi_site_22463 iPseU_CNN:0;iRNA_PseU:0 Systolic blood pressure 22464 chr5 140811113 140811113 1 + G A UCEC 140811112 + 140811092 140811132 41 GCCTTGGGCACGCAGCTGCTTGTAGTCAACGCTACCGACCC GCCTTGGGCACGCAGCTGCTTATAGTCAACGCTACCGACCC < 41bp 0.574005682547135 0.898262733677658 0.4021698 0.77461874 prediction 0.648514102261045 Functional Gain - PCDHGA12 ENSG00000253159 CDS Human protein_coding chr5:140811112 chr5:140811113 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_28740 0 0 0 0 0 exosome 0.43871258298838 0.43863135279629 0.54923748 0 hPsi_site_22464 iPseU_CNN:0.54923748;iRNA_PseU:0 22465 chr7 872172 872172 1 + C A COAD 872171 + 872151 872191 41 AAGTGGTGAACATGGATTTTTCTCGGCTTCACATGTACAGT AAGTGGTGAACATGGATTTTTATCGGCTTCACATGTACAGT < 41bp 0.524569940701469 0.848822832909512 0.45432037 0.51250315 prediction 0.648505784416086 Functional Gain - SUN1 ENSG00000164828 CDS Human protein_coding chr7:872171 chr7:872172 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28741 0 0 1 0 1 Endoplasmic reticulum 0.438717309368637 0.438718182742573 0.0250063 0 hPsi_site_22465 iPseU_CNN:0.0250063;iRNA_PseU:0 22466 chr1 43783303 43783303 1 + C A CESC 43783302 + 43783282 43783322 41 GTTCTGTGCAAATTGGGGCATCACCCCAACATCATCAACCT GTTCTGTGCAAATTGGGGCATAACCCCAACATCATCAACCT < 41bp 0.464948173261074 0.824251706648294 0.254378 0.53417313 prediction 0.648503413296587 Functional Gain - TIE1 ENSG00000066056 CDS Human protein_coding chr1:43783302 chr1:43783303 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28742 0 0 0 0 1 Cytosol 0.438719495626795 0.438718635842228 0.06834626 0 hPsi_site_22466 iPseU_CNN:0.06834626;iRNA_PseU:0 22467 chr19 44681399 44681399 1 + C A UCEC 44681398 + 44681378 44681418 41 AGTGCACATCTTCAAGCCCATCAAAAAGTCCACACTGGAGA AGTGCACATCTTCAAGCCCATAAAAAAGTCCACACTGGAGA < 41bp 0.486266941787861 0.824251433391338 0.22810513 0.28260273 prediction 0.648502866782676 Functional Gain - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681398 chr19:44681399 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28743 0 0 1 2 0 Cytosol 0.438723265294446 0.438721848069501 0 0 hPsi_site_22467 iPseU_CNN:0;iRNA_PseU:0 22468 chrX 30254885 30254885 1 + G A SKCM 30254884 + 30254864 30254904 41 TGGGGTCCAAGAGCCCATGCTGAAACCAGCAAGATGAAGGT TGGGGTCCAAGAGCCCATGCTAAAACCAGCAAGATGAAGGT < 41bp 0.41943903635898 0.824231688291647 0.18041146 0.30776328 prediction 0.648463376583294 Functional Gain - MAGEB3 ENSG00000198798 CDS Human protein_coding chrX:30254884 chrX:30254885 nonsynonymous SNV 0.329 3 22 hPsi_associated_SNPs_28744 0 0 0 0 0 unknown 0.438740408838369 0.438718592243405 0 0 hPsi_site_22468 iPseU_CNN:0;iRNA_PseU:0 22469 chr21 45547881 45547881 1 + G A LUSC 45547880 + 45547860 45547900 41 CTGGACACCCGCGTGCTCTTTGACCCGTTTGAGCTGGACAC CTGGACACCCGCGTGCTCTTTAACCCGTTTGAGCTGGACAC < 41bp 0.405904019636137 0.824229425199666 0.23148522 0.323932 prediction 0.648458850399332 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45547880 chr21:45547881 nonsynonymous SNV 0.639 2 22 hPsi_associated_SNPs_28745 0 0 1 0 1 Nucleus 0.438718494483119 0.438719247136335 0 0 hPsi_site_22469 iPseU_CNN:0;iRNA_PseU:0 22470 chr22 39477025 39477025 1 + G A CESC 39477024 + 39477004 39477044 41 CTGCATCGTGACCAGGAGTATGAGGTCACCTGGTACATATC CTGCATCGTGACCAGGAGTATAAGGTCACCTGGTACATATC < 41bp 0.417844388864949 0.824227167781491 0.35065717 0.5168464 prediction 0.648454335562982 Functional Gain - APOBEC3G ENSG00000239713 CDS Human protein_coding chr22:39477024 chr22:39477025 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28746 0 0 0 0 1 Cytosol 0.438718591109603 0.438718592995102 0.0336928000000001 0 hPsi_site_22470 iPseU_CNN:0.0336928000000001;iRNA_PseU:0 22471 chr19 8953665 8953665 1 + C A UCEC 8953664 + 8953644 8953684 41 TCCCTAGTTACACAGGTGGATCTCTGCTGGAGGATCTTGCC TCCCTAGTTACACAGGTGGATATCTGCTGGAGGATCTTGCC < 41bp 0.518098284435976 0.842324536364864 0.30648565 0.343378 prediction 0.648452503857775 Functional Gain - MBD3L1 ENSG00000170948 CDS Human protein_coding chr19:8953664 chr19:8953665 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28747 0 0 0 0 0 nucleus 0.438718494943727 0.438718585966158 0 0 hPsi_site_22471 iPseU_CNN:0;iRNA_PseU:0 22472 chr19 40884002 40884002 1 + G A CESC 40884001 + 40883981 40884021 41 CCAGCTGGAGGCCATTTTCCTGAGGGACTGGGACTCCCCTT CCAGCTGGAGGCCATTTTCCTAAGGGACTGGGACTCCCCTT < 41bp 0.418612564145302 0.824224403410275 0.24316049 0.32622987 prediction 0.64844880682055 Functional Gain - PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884001 chr19:40884002 synonymous SNV . 0 22 hPsi_associated_SNPs_28748 0 0 1 0 0 Endoplasmic reticulum 0.438718592995102 0.438718592995102 0 0 hPsi_site_22472 iPseU_CNN:0;iRNA_PseU:0 22473 chr17 73228031 73228031 1 + G A LUSC 73228030 + 73228010 73228050 41 GAACACCGAGCAGAAAGCCCTGAAGGTGCTGCGGATCTGTG GAACACCGAGCAGAAAGCCCTAAAGGTGCTGCGGATCTGTG < 41bp 0.398759934443914 0.824224384891826 0.24816349 0.31563097 prediction 0.648448769783651 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73228030 chr17:73228031 synonymous SNV . 0 22 hPsi_associated_SNPs_28749 0 0 1 0 1 Nucleus 0.438709693848675 0.438910732847262 0 0 hPsi_site_22473 iPseU_CNN:0;iRNA_PseU:0 22474 chr1 153191287 153191287 1 + G A rs144964467 153191286 + 153191266 153191306 41 AAAATTCACCCAGCTCTGGGTGTGTAACAGCCAAGGATACC AAAATTCACCCAGCTCTGGGTATGTAACAGCCAAGGATACC < 41bp 0.534439692194992 0.858662506780227 0.21078852 0.42412558 prediction 0.648445629170471 Functional Gain - PRR9 ENSG00000203783 UTR3 Human protein_coding chr1:153191286 chr1:153191287 . . 0 22 hPsi_associated_SNPs_28750 0 0 0 0 0 exosome 0.438718593022932 0.438718593365553 0 0 hPsi_site_22474 iPseU_CNN:0;iRNA_PseU:0 22475 chr12 58007068 58007068 1 + C A BLCA 58007067 + 58007047 58007087 41 AACTGGATGTTGGAGCCAGCTCTAGCCACAGGAGAGGAGCT AACTGGATGTTGGAGCCAGCTATAGCCACAGGAGAGGAGCT < 41bp 0.466822686223849 0.82422264416529 0.411877 0.55945015 prediction 0.64844528833058 Functional Gain - ARHGEF25 ENSG00000240771 CDS Human protein_coding chr12:58007067 chr12:58007068 nonsynonymous SNV 0.674 0 22 hPsi_associated_SNPs_28751 0 0 1 0 2 chromatin 0.438718778165041 0.438740047589907 0.1189003 0 hPsi_site_22475 iPseU_CNN:0.1189003;iRNA_PseU:0 22476 chr1 40529940 40529940 1 + C A LUAD 40529939 + 40529919 40529959 41 GGCACCCATCTCAGAGCAGATCAAAGAAGTGATAACCTTTC GGCACCCATCTCAGAGCAGATAAAAGAAGTGATAACCTTTC < 41bp 0.461639800151258 0.82422252897252 0.15109652 0.26337826 prediction 0.648445057945041 Functional Gain - CAP1 ENSG00000131236 CDS Human protein_coding chr1:40529939 chr1:40529940 synonymous SNV . 0 22 hPsi_associated_SNPs_28752 0 0 1 0 2 Ribosome 0.438718232797977 0.438718591266306 0 0 hPsi_site_22476 iPseU_CNN:0;iRNA_PseU:0 22477 chr19 7965363 7965363 1 + C A UCEC 7965362 + 7965342 7965382 41 CCCTGAGCACGTGCGGAAGCTCAGGAGCCTGGAGCAGCTCT CCCTGAGCACGTGCGGAAGCTAAGGAGCCTGGAGCAGCTCT < 41bp 0.53597969818081 0.860198802609069 0.3534931 0.48572266 prediction 0.648438208856519 Functional Gain - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7965362 chr19:7965363 synonymous SNV . 0 22 hPsi_associated_SNPs_28753 0 0 0 0 0 chromatin 0.438719532657391 0.438718592996228 0 0 hPsi_site_22477 iPseU_CNN:0;iRNA_PseU:0 22478 chr5 150407035 150407035 1 + C A UCEC 150407034 + 150407014 150407054 41 CTTTGTCCCTAATTTCCAGCTCTTTGAGAAAGGGGATGTCA CTTTGTCCCTAATTTCCAGCTATTTGAGAAAGGGGATGTCA < 41bp 0.460007539443417 0.824217595142145 0.23492342 0.31027853 prediction 0.648435190284289 Functional Gain - GPX3 ENSG00000211445 CDS Human protein_coding chr5:150407034 chr5:150407035 unknown 1.000 0 22 hPsi_associated_SNPs_28754 0 0 1 0 2 Ribosome 0.438700228604843 0.440195789473029 0 0 hPsi_site_22478 iPseU_CNN:0;iRNA_PseU:0 22479 chr5 68555718 68555718 1 + C A UCEC 68555717 + 68555697 68555737 41 CAGATTTTGGCCTGGCCAAATCTTTTGGGAGCCCCAATAGA CAGATTTTGGCCTGGCCAAATATTTTGGGAGCCCCAATAGA < 41bp 0.463029407758277 0.824215804785774 0.28341895 0.28372148 prediction 0.648431609571547 Functional Gain - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68555717 chr5:68555718 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_28755 0 0 1 0 2 Cytosol 0.4387185929951 0.438718592995195 0 0 hPsi_site_22479 iPseU_CNN:0;iRNA_PseU:0 22480 chr2 27873415 27873415 1 + G A rs7382 27873414 + 27873394 27873434 41 AAAAGAACGTAGTCTCCTGGTGACCACCTCAGATCTCTATT AAAAGAACGTAGTCTCCTGGTAACCACCTCAGATCTCTATT < 41bp 0.450998625219017 0.824212903197394 0.14515197 0.2946372 prediction 0.648425806394789 Functional Gain - GPN1 ENSG00000198522 UTR3 Human protein_coding chr2:27873414 chr2:27873415 . . 0 22 hPsi_associated_SNPs_28756 0 0 1 0 0 Ribosome 0.438718618629547 0.438718011030405 0 0 hPsi_site_22480 iPseU_CNN:0;iRNA_PseU:0 22481 chr11 60296873 60296873 1 + C A STAD 60296872 + 60296852 60296892 41 AGTATCACGTATTTTACTGTTCTTCTACGGTTTGGAATTTT AGTATCACGTATTTTACTGTTATTCTACGGTTTGGAATTTT < 41bp 0.480097648896366 0.824212802353859 0.32711372 0.4049245 prediction 0.648425604707717 Functional Gain - MS4A13 ENSG00000204979 CDS Human protein_coding chr11:60296872 chr11:60296873 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28757 0 0 0 0 2 unknown 0.438718811118924 0.438723410998356 0 0 hPsi_site_22481 iPseU_CNN:0;iRNA_PseU:0 22482 chr16 29982792 29982792 1 + G T COAD 29982791 + 29982771 29982811 41 TCCTTCCTGCTTCTCTTCTGTGGCCTTCTCTGCTGTGTCAC TCCTTCCTGCTTCTCTTCTGTTGCCTTCTCTGCTGTGTCAC < 41bp 0.497956887875387 0.824211599172919 0.23709157 0.2550079 prediction 0.648423198345839 Functional Gain - TMEM219 ENSG00000149932 CDS Human protein_coding chr16:29982791 chr16:29982792 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28758 0 0 1 1 1 Cytosol 0.438717979890035 0.438744508372259 0 0 hPsi_site_22482 iPseU_CNN:0;iRNA_PseU:0 22483 chr5 54640973 54640973 1 + G A LGG 54640972 + 54640952 54640992 41 GCAATGCAAGTGCTTCGAGATGCAGGTGATTTGGCCAAAGG GCAATGCAAGTGCTTCGAGATACAGGTGATTTGGCCAAAGG < 41bp 0.571570409293061 0.895781592850352 0.26710632 0.6780933 prediction 0.648422367114582 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640972 chr5:54640973 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28759 0 0 1 0 1 Nucleus 0.429940439743154 0.437507546435958 0.3561866 0 hPsi_site_22483 iPseU_CNN:0.3561866;iRNA_PseU:0 22484 chr14 20711630 20711630 1 + C A LUSC 20711629 + 20711609 20711649 41 CTAGTATGTACATTCTTCGATCCTATATCCTGTTACTAACA CTAGTATGTACATTCTTCGATACTATATCCTGTTACTAACA < 41bp 0.509806997157012 0.83401698740466 0.203076 0.28600535 prediction 0.648419980495296 Functional Gain - OR11H4 ENSG00000176198 CDS Human protein_coding chr14:20711629 chr14:20711630 nonsynonymous SNV 0.897 4 22 hPsi_associated_SNPs_28760 0 0 0 0 0 unknown 0.438742338401272 0.438704205101419 0 0 hPsi_site_22484 iPseU_CNN:0;iRNA_PseU:0 22485 chr15 64448268 64448268 1 + C T KIRC 64448269 - 64448249 64448289 41 AGGATGTGATCATCGCAGACTGCGGCAAGATCGAGGTGGAG AGGATGTGATCATCGCAGACTACGGCAAGATCGAGGTGGAG < 41bp 0.426536055716649 0.82420863828813 0.281613 0.61438984 prediction 0.648417276576261 Functional Gain - PPIB ENSG00000166794 CDS Human protein_coding chr15:64448269 chr15:64448268 nonsynonymous SNV 0.934 2 22 hPsi_associated_SNPs_28761 0 0 1 0 1 Ribosome 0.438675985541361 0.438724334413219 0.22877968 0 hPsi_site_22485 iPseU_CNN:0.22877968;iRNA_PseU:0 22486 chr6 167717600 167717600 1 + C A UCEC 167717599 + 167717579 167717619 41 CAGTGGATTGCAGCAAGGATTCCTCTCCAGCGAATACACAA CAGTGGATTGCAGCAAGGATTACTCTCCAGCGAATACACAA < 41bp 0.537923596535487 0.862127850104462 0.23162752 0.59163016 prediction 0.648408507137949 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167717599 chr6:167717600 nonsynonymous SNV 0.096 3 22 hPsi_associated_SNPs_28762 0 0 0 0 0 cytosol 0.439414811780237 0.437964267473547 0.18326032 0 hPsi_site_22486 iPseU_CNN:0.18326032;iRNA_PseU:0 22487 chr11 103908514 103908514 1 + G A HNSC 103908513 + 103908493 103908533 41 CAGTGCTCTTTCTCCATACTTGAGGATCAACCCATGGATAT CAGTGCTCTTTCTCCATACTTAAGGATCAACCCATGGATAT < 41bp 0.427584034927043 0.824202967028922 0.39793918 0.6994809 prediction 0.648405934057845 Functional Gain - DDI1 ENSG00000170967 CDS Human protein_coding chr11:103908513 chr11:103908514 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_28763 0 0 0 0 0 exosome 0.438520461900253 0.438719758844361 0.3989618 0 hPsi_site_22487 iPseU_CNN:0.3989618;iRNA_PseU:0 22488 chr19 10818000 10818000 1 + G A ESCA 10817999 + 10817979 10818019 41 CTCGGACATCATCATGCAGCTGGACGACGTGGTTAGCAGTA CTCGGACATCATCATGCAGCTAGACGACGTGGTTAGCAGTA < 41bp 0.407221494622329 0.824202181701248 0.23030728 0.34234202 prediction 0.648404363402495 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10817999 chr19:10818000 synonymous SNV . 0 22 hPsi_associated_SNPs_28764 0 0 1 0 2 Ribosome 0.438676552112708 0.438834354694989 0 0 hPsi_site_22488 iPseU_CNN:0;iRNA_PseU:0 22489 chr10 50835656 50835656 1 + C A COAD 50835655 + 50835635 50835675 41 TGACCTGTTTACCCCACAGTTCTTTGTCTTGGATGTTGTCA TGACCTGTTTACCCCACAGTTATTTGTCTTGGATGTTGTCA < 41bp 0.463699601536101 0.824200074748724 0.27870047 0.33774677 prediction 0.648400149497448 Functional Gain - CHAT ENSG00000070748 CDS Human protein_coding chr10:50835655 chr10:50835656 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28765 0 0 0 0 1 unknown 0.438387138338948 0.438442059148973 0 0 hPsi_site_22489 iPseU_CNN:0;iRNA_PseU:0 22490 chr9 36171219 36171219 1 + G A OV 36171218 + 36171198 36171238 41 CCAGAGGCACTGGACTGTCCTGCCTGCTGTCTAGCCAAGCT CCAGAGGCACTGGACTGTCCTACCTGCTGTCTAGCCAAGCT < 41bp 0.556476905340273 0.880673159441699 0.2678638 0.42849493 prediction 0.648392508202852 Functional Gain - CCIN ENSG00000185972 CDS Human protein_coding chr9:36171218 chr9:36171219 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28766 0 0 0 0 0 exosome 0.458471385720499 0.43884541393904 0 0 hPsi_site_22490 iPseU_CNN:0;iRNA_PseU:0 22491 chr7 128447455 128447455 1 + G T UCEC 128447454 + 128447434 128447474 41 GCTTCAGGAGATGAAGCAGCTGTACCAGGCCAGCAAGGACG GCTTCAGGAGATGAAGCAGCTTTACCAGGCCAGCAAGGACG < 41bp 0.4856645175166 0.824195658265794 0.44511345 0.44651824 prediction 0.648391316531587 Functional Gain - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128447454 chr7:128447455 synonymous SNV . 0 22 hPsi_associated_SNPs_28767 0 0 0 0 1 chromatin 0.438726107723324 0.43871869315531 0 0 hPsi_site_22491 iPseU_CNN:0;iRNA_PseU:0 22492 chr2 241818279 241818279 1 + C A rs4273214 241818278 + 241818258 241818298 41 CTGGCACTGGCACACACCTGTCCCATGCCCACCCTGAGGGA CTGGCACTGGCACACACCTGTACCATGCCCACCCTGAGGGA < 41bp 0.49471204306047 0.82419121419822 0.4356219 0.80983806 prediction 0.648382428396441 Functional Gain - AGXT ENSG00000172482 UTR3 Human protein_coding chr2:241818278 chr2:241818279 . . 0 22 hPsi_associated_SNPs_28768 2 0 1 0 0 Cytosol 0.438718594751544 0.438716470020107 0.61967612 0 hPsi_site_22492 iPseU_CNN:0.61967612;iRNA_PseU:0 22493 chr3 52830625 52830625 1 + G A SKCM 52830624 + 52830604 52830644 41 CAAGGAGGTTTCCTTTGATGTGGAGCTGCCCAAGACGGCCT CAAGGAGGTTTCCTTTGATGTAGAGCTGCCCAAGACGGCCT < 41bp 0.400876808826171 0.824189131700263 0.24766997 0.31274408 prediction 0.648378263400527 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52830624 chr3:52830625 synonymous SNV . 0 22 hPsi_associated_SNPs_28769 0 0 1 0 1 cytosol 0.4387185929713 0.438719296076542 0 0 hPsi_site_22493 iPseU_CNN:0;iRNA_PseU:0 22494 chr7 24718875 24718875 1 + C A UCEC 24718874 + 24718854 24718894 41 CATGGGGAATATGAAGGAAATCTCTATGGAACCAAAATTGA CATGGGGAATATGAAGGAAATATCTATGGAACCAAAATTGA < 41bp 0.466274045090232 0.824185109830623 0.2753768 0.62670904 prediction 0.648370219661245 Functional Gain - MPP6 ENSG00000105926 CDS Human protein_coding chr7:24718874 chr7:24718875 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28770 0 0 1 0 1 Cytosol 0.438718604988347 0.438717977155174 0.25341808 0 hPsi_site_22494 iPseU_CNN:0.25341808;iRNA_PseU:0 22495 chr2 149528727 149528727 1 + C A UCEC 149528726 + 149528706 149528746 41 TATAGACTTTTCTTCTAATTTCTCTCGGACCAATGCTTCCA TATAGACTTTTCTTCTAATTTATCTCGGACCAATGCTTCCA < 41bp 0.486992220782514 0.824184573703935 0.23118925 0.313622 prediction 0.648369147407869 Functional Gain - EPC2 ENSG00000135999 CDS Human protein_coding chr2:149528726 chr2:149528727 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28771 0 0 1 0 0 Cytosol 0.439032616510112 0.437748325861778 0 0 hPsi_site_22495 iPseU_CNN:0;iRNA_PseU:0 22496 chr13 103510633 103510633 1 + C A READ 103510632 + 103510612 103510652 41 TTTATCTTTACAGGAAGAGTTCTTTCATAATCCTCAAGCGA TTTATCTTTACAGGAAGAGTTATTTCATAATCCTCAAGCGA < 41bp 0.469039570978099 0.824168848775356 0.6081239 0.71448207 prediction 0.648337697550712 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103510632 chr13:103510633 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28772 0 0 1 0 1 unknown 0.438718593704541 0.438718739060047 0.21271634 0 hPsi_site_22496 iPseU_CNN:0.21271634;iRNA_PseU:0 22497 chr1 18808064 18808064 1 + C A BLCA 18808063 + 18808043 18808083 41 GACAGTAAACCCCGTGAGCATCCAGGACTGGGGCAACTAGA GACAGTAAACCCCGTGAGCATACAGGACTGGGGCAACTAGA < 41bp 0.4844238355252 0.824166822438568 0.23315665 0.35127518 prediction 0.648333644877136 Functional Gain - KLHDC7A ENSG00000179023 CDS Human protein_coding chr1:18808063 chr1:18808064 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28773 0 0 0 0 0 Cytosol 0.438718592995547 0.438718635593593 0 0 hPsi_site_22497 iPseU_CNN:0;iRNA_PseU:0 22498 chr1 152692000 152692000 1 + G A UCEC 152691999 + 152691979 152692019 41 TTTGCAAAGCCACAGAACAATGTGTGACCAGCAGAAGCAGC TTTGCAAAGCCACAGAACAATATGTGACCAGCAGAAGCAGC < 41bp 0.452549905086072 0.824163628730951 0.28878438 0.40365165 prediction 0.648327257461902 Functional Gain - C1orf68 ENSG00000198854 CDS Human protein_coding chr1:152691999 chr1:152692000 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_28774 0 0 0 0 0 exosome 0.439510570940093 0.439425030609984 0 0 hPsi_site_22498 iPseU_CNN:0;iRNA_PseU:0 22499 chr7 149561232 149561232 1 + C A LAML 149561231 + 149561211 149561251 41 GAAGGAGGAGATGGGAGCCCTCTATGTGGAGGAGCCCAGGA GAAGGAGGAGATGGGAGCCCTATATGTGGAGGAGCCCAGGA < 41bp 0.470995312774045 0.824162784834264 0.3830637 0.5538224 prediction 0.648325569668528 Functional Gain - ZNF862 ENSG00000106479 CDS Human protein_coding chr7:149561231 chr7:149561232 synonymous SNV . 0 22 hPsi_associated_SNPs_28775 0 0 0 0 1 exosome 0.438718593287232 0.438718592994358 0.1076448 0 hPsi_site_22499 iPseU_CNN:0.1076448;iRNA_PseU:0 22500 chr11 63994397 63994397 1 + G A ACC 63994396 + 63994376 63994416 41 TACTTCCTACCGAGACTTCCTGGGCACCAACTGGTCCAGCT TACTTCCTACCGAGACTTCCTAGGCACCAACTGGTCCAGCT < 41bp 0.402290471286337 0.824159549807645 0.14156666 0.2520734 prediction 0.648319099615291 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994396 chr11:63994397 synonymous SNV . 0 22 hPsi_associated_SNPs_28776 0 0 1 0 0 Ribosome 0.438718592994652 0.438691068145628 0 0 hPsi_site_22500 iPseU_CNN:0;iRNA_PseU:0 22501 chr11 118963485 118963485 1 + G A UCEC 118963484 + 118963464 118963504 41 ACAGGAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACAG ACAGGAAGGAGGCTGCAGTGTACCAGTAGCCGTGCATACAG < 41bp 0.477890946071128 0.824148411910157 0.28702402 0.7033193 prediction 0.648296823820315 Functional Gain - HMBS ENSG00000256269 CDS Human protein_coding chr11:118963484 chr11:118963485 synonymous SNV . 0 22 hPsi_associated_SNPs_28777 0 0 1 0 1 Cytosol 0.438748636333287 0.438522112107296 0.4066386 0 hPsi_site_22501 iPseU_CNN:0.4066386;iRNA_PseU:0 22502 chr5 178506215 178506215 1 + C A UCEC 178506214 + 178506194 178506234 41 GCCACAGATCATCCCTTCTTTCTCATCAGAGAATTCATACT GCCACAGATCATCCCTTCTTTATCATCAGAGAATTCATACT < 41bp 0.532224372364915 0.856362013214716 0.32341212 0.32632944 prediction 0.648275281699603 Functional Gain - ZNF354C ENSG00000177932 CDS Human protein_coding chr5:178506214 chr5:178506215 nonsynonymous SNV 0.901 1 22 hPsi_associated_SNPs_28778 0 0 0 0 0 exosome 0.438718167553049 0.43871845092119 0 0 hPsi_site_22502 iPseU_CNN:0;iRNA_PseU:0 22503 chr7 143632970 143632970 1 + G A rs115160237 143632969 + 143632949 143632989 41 GACACCTTTCTGCCTGGTTCTGTTGTCCTACATCCGGATCA GACACCTTTCTGCCTGGTTCTATTGTCCTACATCCGGATCA < 41bp 0.567020851108545 0.891149943875907 0.6578785 0.7929169 prediction 0.648258185534724 Functional Gain - OR2F2 ENSG00000221910 CDS Human protein_coding chr7:143632969 chr7:143632970 synonymous SNV . 0 22 hPsi_associated_SNPs_28779 0 0 0 0 0 unknown 0.439453895615905 0.438884363482327 0.2700768 0 hPsi_site_22503 iPseU_CNN:0.2700768;iRNA_PseU:0 22504 chr12 6973946 6973946 1 + G A CESC 6973945 + 6973925 6973965 41 CACATTGACGACCTGGATGCTGAAGCTGCCATGGACATCTC CACATTGACGACCTGGATGCTAAAGCTGCCATGGACATCTC < 41bp 0.400456626624006 0.824124624742411 0.18384174 0.31699556 prediction 0.648249249484822 Functional Gain - USP5 ENSG00000111667 CDS Human protein_coding chr12:6973945 chr12:6973946 nonsynonymous SNV 0.714 3 22 hPsi_associated_SNPs_28780 0 0 1 0 2 Nucleus 0.43580421335023 0.438187694317068 0 0 hPsi_site_22504 iPseU_CNN:0;iRNA_PseU:0 22505 chr5 169535568 169535568 1 + G A rs201090454 169535567 + 169535547 169535587 41 AGCCCTCACTTCTACAACAGTGTCAACACCAGTGGTGTCCT AGCCCTCACTTCTACAACAGTATCAACACCAGTGGTGTCCT < 41bp 0.417679120202321 0.824121490779929 0.2207332 0.29673177 prediction 0.648242981559858 Functional Gain - FOXI1 ENSG00000168269 CDS Human protein_coding chr5:169535567 chr5:169535568 nonsynonymous SNV 0.558 1 22 hPsi_associated_SNPs_28781 0 0 0 0 0 exosome 0.439208704223685 0.437978132001015 0 0 hPsi_site_22505 iPseU_CNN:0;iRNA_PseU:0 22506 chr16 89256670 89256670 1 + G A UCEC 89256669 + 89256649 89256689 41 AGGCCCTGGACTATGAGAGCTGTGAACACTACGAACTCAAA AGGCCCTGGACTATGAGAGCTATGAACACTACGAACTCAAA < 41bp 0.413372260799866 0.824119217477731 0.23497826 0.6660313 prediction 0.648238434955462 Functional Gain - CDH15 ENSG00000129910 CDS Human protein_coding chr16:89256669 chr16:89256670 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_28782 0 0 0 0 1 nucleus 0.438721549473327 0.43871961915398 0.3320626 0 hPsi_site_22506 iPseU_CNN:0.3320626;iRNA_PseU:0 22507 chr1 47603166 47603166 1 + C A LGG 47603165 + 47603145 47603185 41 CAGGTGCTGCACCATGAGTGTCTCTGTCCTGAGCCCCAGCA CAGGTGCTGCACCATGAGTGTATCTGTCCTGAGCCCCAGCA < 41bp 0.524163195421001 0.848280391225222 0.29323682 0.533512 prediction 0.648234391608443 Functional Gain - CYP4A22 ENSG00000162365 CDS Human protein_coding chr1:47603165 chr1:47603166 synonymous SNV . 0 22 hPsi_associated_SNPs_28783 0 0 0 0 0 exosome 0.438721709802083 0.438729763418054 0.067024 0 hPsi_site_22507 iPseU_CNN:0.067024;iRNA_PseU:0 22508 chr6 110064362 110064362 1 + C A UCEC 110064361 + 110064341 110064381 41 AACAAATACTCTGCGATGCTTCTGTGATGTCTTTCACTGCA AACAAATACTCTGCGATGCTTATGTGATGTCTTTCACTGCA < 41bp 0.532870100083586 0.856987200372902 0.3618311 0.3099122 prediction 0.648234200578632 Functional Gain - FIG4 ENSG00000112367 CDS Human protein_coding chr6:110064361 chr6:110064362 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28784 0 0 1 0 0 Cytosol 0.437209788677015 0.43867047236019 0 0 hPsi_site_22508 iPseU_CNN:0;iRNA_PseU:0 22509 chr9 90500470 90500470 1 + C A ACC 90500469 + 90500449 90500489 41 GGAGGTAGGTGGCTGCACATTCATCCACCCTGACGTGCAGA GGAGGTAGGTGGCTGCACATTAATCCACCCTGACGTGCAGA < 41bp 0.466958039584764 0.824116874738637 0.23071858 0.47387603 prediction 0.648233749477274 Functional Gain - SPATA31E1 ENSG00000177992 CDS Human protein_coding chr9:90500469 chr9:90500470 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_28785 0 0 0 0 0 exosome 0.438738328441699 0.438708251324366 0 0 hPsi_site_22509 iPseU_CNN:0;iRNA_PseU:0 22510 chr4 42895452 42895452 1 + G A LUSC 42895451 + 42895431 42895471 41 TGTGGGATAGATGGACTAGGTGATTCCGATGGACAGCAGAA TGTGGGATAGATGGACTAGGTAATTCCGATGGACAGCAGAA < 41bp 0.566412158346544 0.890527039635722 0.2339986 0.6144123 prediction 0.648229762578357 Functional Gain - GRXCR1 ENSG00000215203 CDS Human protein_coding chr4:42895451 chr4:42895452 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_28786 0 0 0 0 0 unknown 0.438718609820705 0.438718699716987 0.2288246 0 hPsi_site_22510 iPseU_CNN:0.2288246;iRNA_PseU:0 22511 chr4 148453704 148453704 1 + C A UCEC 148453703 + 148453683 148453723 41 CGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGA CGTGTTCAGGGAATTGGGATTACTTTGGTAACTGCCATTGA < 41bp 0.536976864740795 0.861091185299054 0.20097163 0.244109 prediction 0.648228641116517 Functional Gain - EDNRA ENSG00000151617 CDS Human protein_coding chr4:148453703 chr4:148453704 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28787 0 0 0 0 1 Nucleus 0.438687360629738 0.438690088442078 0 0 hPsi_site_22511 iPseU_CNN:0;iRNA_PseU:0 22512 chr12 100685357 100685357 1 + C A UCEC 100685356 + 100685336 100685376 41 AAAAGGATCAAATCATTGATTCTCTAAAACGAGGAGTCCAA AAAAGGATCAAATCATTGATTATCTAAAACGAGGAGTCCAA < 41bp 0.532354229913811 0.856466311172224 0.43107048 0.62447834 prediction 0.648224162516826 Functional Gain - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100685356 chr12:100685357 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_28788 0 0 1 0 2 chromatin 0.438718978241752 0.438717738083538 0.24895668 0 hPsi_site_22512 iPseU_CNN:0.24895668;iRNA_PseU:0 22513 chr7 73150082 73150082 1 + G A rs374107642 73150081 + 73150061 73150101 41 GCAGGCGGTGGAGGCGGAGCTGCAGAGATGCAAAGCCAGGC GCAGGCGGTGGAGGCGGAGCTACAGAGATGCAAAGCCAGGC < 41bp 0.551536461228844 0.875648239829664 0.27008384 0.4135657 prediction 0.648223557201641 Functional Gain - ABHD11-AS1 ENSG00000225969 ncRNA_exonic Human antisense chr7:73150081 chr7:73150082 . . 0 22 hPsi_associated_SNPs_28789 0 0 0 0 2 unknown 0.438689668122839 0.438693782125666 0 0 hPsi_site_22513 iPseU_CNN:0;iRNA_PseU:0 22514 chr7 144015469 144015469 1 + C A LUAD 144015468 + 144015448 144015488 41 GCCCCAGATGCTGGCGAACCTCCTGCATCCAGCCAAGCCCA GCCCCAGATGCTGGCGAACCTACTGCATCCAGCCAAGCCCA < 41bp 0.532490354236261 0.856599693080958 0.22145292 0.33355665 prediction 0.648218677689394 Functional Gain - OR2A1;OR2A42 ENSG00000221970 CDS Human protein_coding chr7:144015468 chr7:144015469 synonymous SNV . 0 22 hPsi_associated_SNPs_28790 0 0 0 0 0 unknown 0.43870037269776 0.439676330884888 0 0 hPsi_site_22514 iPseU_CNN:0;iRNA_PseU:0 22515 chr1 11728799 11728799 1 + G A LUSC 11728798 + 11728778 11728818 41 GCTGGAGCTGTTCACGCACGTGCCCGCCCGCCAGCTGCTGC GCTGGAGCTGTTCACGCACGTACCCGCCCGCCAGCTGCTGC < 41bp 0.420992234572964 0.824107483622514 0.22865632 0.81311107 prediction 0.648214967245027 Functional Gain - FBXO6 ENSG00000116663 CDS Human protein_coding chr1:11728798 chr1:11728799 synonymous SNV . 0 22 hPsi_associated_SNPs_28791 0 0 0 0 1 Ribosome 0.438678255716468 0.438826924489985 0.62622214 0 hPsi_site_22515 iPseU_CNN:0.62622214;iRNA_PseU:0 22516 chr11 5510108 5510108 1 + C A UCEC 5510107 + 5510087 5510127 41 GTCATTGCCATGGACAATGCTCTTCATGCACCTATGTACCT GTCATTGCCATGGACAATGCTATTCATGCACCTATGTACCT < 41bp 0.523852536843516 0.847945317263877 0.27231872 0.4326532 prediction 0.648185560840722 Functional Gain - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510107 chr11:5510108 nonsynonymous SNV 0.108 4 22 hPsi_associated_SNPs_28792 0 0 0 0 0 chromatin 0.443588167891319 0.437499316288961 0 0 hPsi_site_22516 iPseU_CNN:0;iRNA_PseU:0 22517 chr3 183439812 183439812 1 + C A COAD 183439811 + 183439791 183439831 41 CCAATCATTCAGAAAGTGATTCTTTATCTCAGCACAATGAC CCAATCATTCAGAAAGTGATTATTTATCTCAGCACAATGAC < 41bp 0.468256183179815 0.824089222871304 0.389358 0.43178213 prediction 0.648178445742608 Functional Gain - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183439811 chr3:183439812 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28793 0 0 1 0 0 Nucleus 0.437711096592006 0.438786514555627 0 0 hPsi_site_22517 iPseU_CNN:0;iRNA_PseU:0 22518 chr11 118486774 118486774 1 + C A UCEC 118486773 + 118486753 118486793 41 CAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCA CAGGGAGGACGGTGATTGGCTATGCAGCCAGAGACATCTCA < 41bp 0.538267343331834 0.862355290748495 0.3857013 0.6145746 prediction 0.648175894833322 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118486773 chr11:118486774 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_28794 0 0 0 0 1 Cytosol 0.438718555831683 0.442067631648999 0.2291492 0 hPsi_site_22518 iPseU_CNN:0.2291492;iRNA_PseU:0 22519 chr20 61944199 61944199 1 + C A CHOL 61944198 + 61944178 61944218 41 GGAGCTGCCAGGGGATGCAGTCCAGCTGGCGTGGGTGGCCG GGAGCTGCCAGGGGATGCAGTACAGCTGGCGTGGGTGGCCG < 41bp 0.469443737238422 0.824083598321349 0.21447122 0.52088755 prediction 0.648167196642699 Functional Gain - COL20A1 ENSG00000101203 CDS Human protein_coding chr20:61944198 chr20:61944199 synonymous SNV . 0 22 hPsi_associated_SNPs_28795 0 0 0 0 2 exosome 0.438718592947284 0.438718592963511 0.0417751 0 hPsi_site_22519 iPseU_CNN:0.0417751;iRNA_PseU:0 Body mass index 22520 chr9 5763371 5763371 1 + C A HNSC 5763370 + 5763350 5763390 41 AACATTTACCCGCTAGCTGTTCTGTTTGAAGATGCTTTAGT AACATTTACCCGCTAGCTGTTATGTTTGAAGATGCTTTAGT < 41bp 0.463938447990269 0.824080754039428 0.358621 0.6007875 prediction 0.648161508078856 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5763370 chr9:5763371 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_28796 0 0 1 0 0 Nucleus 0.438718967712382 0.438764970541925 0.201575 0 hPsi_site_22520 iPseU_CNN:0.201575;iRNA_PseU:0 22521 chr3 111799834 111799834 1 + G A OV 111799833 + 111799813 111799853 41 TTTTGACTGGCATTGTTAGCTGGGGACATGGAAGTGGACGA TTTTGACTGGCATTGTTAGCTAGGGACATGGAAGTGGACGA < 41bp 0.429552338451243 0.824077050365681 0.33848876 0.59264076 prediction 0.648154100731362 Functional Gain - TMPRSS7 ENSG00000176040 CDS Human protein_coding chr3:111799833 chr3:111799834 stopgain 1.000 1 22 hPsi_associated_SNPs_28797 0 0 0 0 1 exosome 0.438718592989746 0.438718592056905 0.18528152 0 hPsi_site_22521 iPseU_CNN:0.18528152;iRNA_PseU:0 22522 chr7 65150617 65150617 1 + C A UCEC 65150616 + 65150596 65150636 41 CCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAG CCCTCTGCATGTTGGCCCAGTATTCACCCTCTTTTGCTGAG < 41bp 0.470665164366418 0.824072981093307 0.25774944 0.525677 prediction 0.648145962186615 Functional Gain - INTS4P2 ENSG00000232270 ncRNA_exonic Human other chr7:65150616 chr7:65150617 . . 0 22 hPsi_associated_SNPs_28798 0 0 0 0 1 unknown 0.438767518389556 0.438770703991547 0.0513539999999999 0 hPsi_site_22522 iPseU_CNN:0.0513539999999999;iRNA_PseU:0 22523 chr8 36793082 36793082 1 + C A STAD 36793081 + 36793061 36793101 41 TTCAAGCTGCTGCCTTCAGATCTTGTGTTTTGTGCCATACC TTCAAGCTGCTGCCTTCAGATATTGTGTTTTGTGCCATACC < 41bp 0.469598294611666 0.824065658761988 0.64825135 0.57770336 prediction 0.648131317523976 Functional Gain - KCNU1 ENSG00000215262 CDS Human protein_coding chr8:36793081 chr8:36793082 nonsynonymous SNV 0.032 1 22 hPsi_associated_SNPs_28799 0 0 0 0 1 unknown 0.438719210999118 0.43871898428071 0 0 hPsi_site_22523 iPseU_CNN:0;iRNA_PseU:0 22524 chr7 55210035 55210035 1 + C A UCEC 55210034 + 55210014 55210054 41 GGCACTTTTGAAGATCATTTTCTCAGCCTCCAGAGGATGTT GGCACTTTTGAAGATCATTTTATCAGCCTCCAGAGGATGTT < 41bp 0.534566580139566 0.858631578993419 0.4303763 0.43598238 prediction 0.648129997707704 Functional Gain - EGFR ENSG00000146648 CDS Human protein_coding chr7:55210034 chr7:55210035 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28800 0 0 0 0 2 Nucleus 0.438718592280794 0.438718592931396 0 0 hPsi_site_22524 iPseU_CNN:0;iRNA_PseU:0 22525 chr3 110790879 110790879 1 + G A rs139530035 110790878 + 110790858 110790898 41 GTGGGGGATGGCGCGGACCCTGCGGCCGTCCCCGCTGTGTC GTGGGGGATGGCGCGGACCCTACGGCCGTCCCCGCTGTGTC < 41bp 0.445141837352424 0.824061306672323 0.3167249 0.4662408 prediction 0.648122613344647 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110790878 chr3:110790879 synonymous SNV . 0 22 hPsi_associated_SNPs_28801 0 0 1 0 0 Ribosome 0.438635714267669 0.438704601523617 0 0 hPsi_site_22525 iPseU_CNN:0;iRNA_PseU:0 22526 chr11 82909636 82909636 1 + C A BLCA 82909635 + 82909615 82909655 41 CATTAATGAACTTGATGTTCTCCATAAGTTTACCCCTTTAC CATTAATGAACTTGATGTTCTACATAAGTTTACCCCTTTAC < 41bp 0.45789436619182 0.824058495615232 0.26597834 0.36255115 prediction 0.648116991230464 Functional Gain - ANKRD42 ENSG00000137494 CDS Human protein_coding chr11:82909635 chr11:82909636 synonymous SNV . 0 22 hPsi_associated_SNPs_28802 0 0 0 0 1 nucleus 0.438624596563377 0.450842090237354 0 0 hPsi_site_22526 iPseU_CNN:0;iRNA_PseU:0 22527 chr2 113315619 113315619 1 + G A UCEC 113315618 + 113315598 113315638 41 ATAGACCTTACAAAACCATTTGAATACCTTTTTGCTACTGG ATAGACCTTACAAAACCATTTAAATACCTTTTTGCTACTGG < 41bp 0.428710298647684 0.824049658349696 0.2803321 0.46464646 prediction 0.648099316699393 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113315618 chr2:113315619 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28803 0 0 1 0 1 Nucleus 0.438719785873046 0.438690169462726 0 0 hPsi_site_22527 iPseU_CNN:0;iRNA_PseU:0 22528 chr12 65564780 65564780 1 + C A LUSC 65564779 + 65564759 65564799 41 GGTGTCCCCAACAGGGAGTTTCAGTGCCCACTACTTGTCGA GGTGTCCCCAACAGGGAGTTTAAGTGCCCACTACTTGTCGA < 41bp 0.476743286190589 0.824042984370967 0.26093152 0.35550368 prediction 0.648085968741935 Functional Gain - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564779 chr12:65564780 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28804 0 0 1 0 0 Endoplasmic reticulum 0.43871980434737 0.438697587108108 0 0 hPsi_site_22528 iPseU_CNN:0;iRNA_PseU:0 22529 chr11 60870050 60870050 1 + G A LIHC 60870049 + 60870029 60870069 41 AACCATGCCCATGGGGTCTCTGCAACCGCTGGCCACCTTGT AACCATGCCCATGGGGTCTCTACAACCGCTGGCCACCTTGT < 41bp 0.422023216908568 0.824041023968414 0.32114056 0.41394594 prediction 0.648082047936828 Functional Gain - CD5 ENSG00000110448 CDS Human protein_coding chr11:60870049 chr11:60870050 synonymous SNV . 0 22 hPsi_associated_SNPs_28805 0 0 0 0 1 exosome 0.43871825849713 0.438718560617934 0 0 hPsi_site_22529 iPseU_CNN:0;iRNA_PseU:0 22530 chr2 219603065 219603065 1 + C A UCEC 219603064 + 219603044 219603084 41 CATGCTGAATAATAATTCCTTCATGTGGCCAAATAGCACGC CATGCTGAATAATAATTCCTTAATGTGGCCAAATAGCACGC < 41bp 0.452907192890466 0.824034909707784 0.24455637 0.31621748 prediction 0.648069819415569 Functional Gain - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219603064 chr2:219603065 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28806 0 0 1 0 0 Cytosol 0.438472048604695 0.43845591471927 0 0 hPsi_site_22530 iPseU_CNN:0;iRNA_PseU:0 22531 chr10 135213074 135213074 1 + G A LIHC 135213073 + 135213053 135213093 41 GGTCATTGGGGTCCCCAACGTGGGCAAGTCCTCCCTCATCA GGTCATTGGGGTCCCCAACGTAGGCAAGTCCTCCCTCATCA < 41bp 0.574455739118173 0.898486515198048 0.34540707 0.7324335 prediction 0.64806155215975 Functional Gain - MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135213073 chr10:135213074 synonymous SNV . 0 22 hPsi_associated_SNPs_28807 0 0 1 0 2 Cytosol 0.440169582225779 0.438716837533408 0.464867 0 hPsi_site_22531 iPseU_CNN:0.464867;iRNA_PseU:0 22532 chr5 180651227 180651227 1 + G A COAD 180651226 + 180651206 180651246 41 GGAGGAGGAAGTGGAGGCTGTGGGGGCTGGCGCGGGGTGGG GGAGGAGGAAGTGGAGGCTGTAGGGGCTGGCGCGGGGTGGG < 41bp 0.407914548847084 0.824030295661298 0.26154298 0.70388025 prediction 0.648060591322597 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651226 chr5:180651227 synonymous SNV . 0 22 hPsi_associated_SNPs_28808 0 0 1 0 0 chromatin 0.438719410635166 0.438718593009849 0.4077605 0 hPsi_site_22532 iPseU_CNN:0.4077605;iRNA_PseU:0 22533 chr1 11896168 11896168 1 + C A UCEC 11896167 + 11896147 11896187 41 CCGCGGTAACGAGAAGGAGTTCATGAAGGGCAACCAGCTCA CCGCGGTAACGAGAAGGAGTTAATGAAGGGCAACCAGCTCA < 41bp 0.45843333609326 0.824026621637039 0.2673928 0.598603 prediction 0.648053243274078 Functional Gain - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11896167 chr1:11896168 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28809 0 0 0 0 1 Endoplasmic reticulum 0.438705986081842 0.438718592905868 0.197206 0 hPsi_site_22533 iPseU_CNN:0.197206;iRNA_PseU:0 22534 chr7 54617841 54617841 1 + C A ESCA 54617840 + 54617820 54617860 41 CCCTCAAGTGGTAGCCAAAATCCCCAAACAAAGTCCACAAT CCCTCAAGTGGTAGCCAAAATACCCAAACAAAGTCCACAAT < 41bp 0.457295755991585 0.824004959402257 0.14914852 0.31370002 prediction 0.648009918804513 Functional Gain - VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54617840 chr7:54617841 synonymous SNV . 0 22 hPsi_associated_SNPs_28810 0 0 0 0 1 exosome 0.438464167420492 0.438400271783413 0 0 hPsi_site_22534 iPseU_CNN:0;iRNA_PseU:0 22535 chr7 116339986 116339986 1 + C A GBM 116339985 + 116339965 116340005 41 CAAGAATAATCAGGTTCTGTTCCATAAACTCTGGATTGCAT CAAGAATAATCAGGTTCTGTTACATAAACTCTGGATTGCAT < 41bp 0.491830116348178 0.824004276423178 0.39458644 0.66942024 prediction 0.648008552846355 Functional Gain - MET ENSG00000105976 CDS Human protein_coding chr7:116339985 chr7:116339986 nonsynonymous SNV 0.956 4 22 hPsi_associated_SNPs_28811 0 0 1 0 0 Cytosol 0.43860926721595 0.438792263774855 0.33884048 0 hPsi_site_22535 iPseU_CNN:0.33884048;iRNA_PseU:0 22536 chr11 51515935 51515935 1 + C A LUSC 51515934 + 51515914 51515954 41 CCTGCTGGTCTCCTATGTGGTCATCTTGTGCTCCCTAAGGA CCTGCTGGTCTCCTATGTGGTAATCTTGTGCTCCCTAAGGA < 41bp 0.534271144238432 0.858271542850671 0.2997025 0.7908431 prediction 0.648000797224477 Functional Gain - OR4C46 ENSG00000185926 CDS Human protein_coding chr11:51515934 chr11:51515935 synonymous SNV . 0 22 hPsi_associated_SNPs_28812 0 0 0 0 0 unknown 0.438717147541764 0.438718711641699 0.5816862 0 hPsi_site_22536 iPseU_CNN:0.5816862;iRNA_PseU:0 22537 chr11 66261044 66261044 1 + C A rs76777675 66261043 + 66261023 66261063 41 CCTCTGGAAGGGGCCCTCCTTCGATGTGCAGGTGGGCCTGC CCTCTGGAAGGGGCCCTCCTTAGATGTGCAGGTGGGCCTGC < 41bp 0.549576022468524 0.873565709511966 0.5539161 0.6634156 prediction 0.647979374086884 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66261043 chr11:66261044 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_28813 0 0 1 0 2 Nucleus 0.438494601477229 0.438604674408206 0.218999 0 hPsi_site_22537 iPseU_CNN:0.218999;iRNA_PseU:0 22538 chr10 5567099 5567099 1 + C A UCEC 5567098 + 5567078 5567118 41 CACAGAATTCAAGGAGGCCTTCTCCCTGTTTGACAAGGATG CACAGAATTCAAGGAGGCCTTATCCCTGTTTGACAAGGATG < 41bp 0.476785267740482 0.823987386288404 0.30919886 0.37962484 prediction 0.647974772576808 Functional Gain - CALML3 ENSG00000178363 CDS Human protein_coding chr10:5567098 chr10:5567099 nonsynonymous SNV 0.303 4 22 hPsi_associated_SNPs_28814 0 0 0 0 0 unknown 0.438718459554951 0.438720853279273 0 0 hPsi_site_22538 iPseU_CNN:0;iRNA_PseU:0 22539 chr15 74337055 74337055 1 + G A UCEC 74337054 + 74337034 74337074 41 TGCCTCCCTGCAGCCCCTGGTGCAGGCAGCTGTGCTGCCCC TGCCTCCCTGCAGCCCCTGGTACAGGCAGCTGTGCTGCCCC < 41bp 0.554565288796592 0.878549151863386 0.33896837 0.62611175 prediction 0.647967726133588 Functional Gain - PML ENSG00000140464 CDS Human protein_coding chr15:74337054 chr15:74337055 synonymous SNV . 0 22 hPsi_associated_SNPs_28815 0 0 0 0 0 Cytosol 0.438718596929015 0.438718595362574 0.2522235 0 hPsi_site_22539 iPseU_CNN:0.2522235;iRNA_PseU:0 22540 chr10 7844273 7844273 1 + G T LIHC 7844272 + 7844252 7844292 41 CGATATTGATGCTGACGTGCTGCAAAATTACCAAGAATACA CGATATTGATGCTGACGTGCTTCAAAATTACCAAGAATACA < 41bp 0.520930443990577 0.844913791216835 0.26854715 0.56856555 prediction 0.647966694452516 Functional Gain - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844272 chr10:7844273 synonymous SNV . 0 22 hPsi_associated_SNPs_28816 0 0 1 0 1 Ribosome 0.438647579110448 0.438754316654927 0.1371311 0 hPsi_site_22540 iPseU_CNN:0.1371311;iRNA_PseU:0 22541 chr1 110170495 110170495 1 + G A COAD 110170494 + 110170474 110170514 41 GCTGGCCGCCCAGAAGAAAGTGCCACACCGAGATTTCTACA GCTGGCCGCCCAGAAGAAAGTACCACACCGAGATTTCTACA < 41bp 0.57662977851319 0.90061132944789 0.3369372 0.68573046 prediction 0.6479631018694 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170494 chr1:110170495 synonymous SNV . 0 22 hPsi_associated_SNPs_28817 0 0 0 0 2 Cytosol 0.438718744494339 0.43872250603167 0.37146092 0 hPsi_site_22541 iPseU_CNN:0.37146092;iRNA_PseU:0 22542 chr14 20692231 20692231 1 + C A COAD 20692230 + 20692210 20692250 41 TTGCTTCCTGCAATTCTATTTCTTTTTTTCACTGGGTACAA TTGCTTCCTGCAATTCTATTTATTTTTTTCACTGGGTACAA < 41bp 0.486092710254389 0.823979789361203 0.18128407 0.17231005 prediction 0.647959578722406 Functional Gain - OR11H6 ENSG00000176219 CDS Human protein_coding chr14:20692230 chr14:20692231 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28818 0 0 0 0 0 unknown 0.438730116432705 0.438718859901706 0 0 hPsi_site_22542 iPseU_CNN:0;iRNA_PseU:0 22543 chr20 44511909 44511909 1 + G A UCEC 44511908 + 44511888 44511928 41 CTGCATCCCTCCAGCCAAGCTGCCCGAGCTTCACTCACACT CTGCATCCCTCCAGCCAAGCTACCCGAGCTTCACTCACACT < 41bp 0.408024107061555 0.823979348865214 0.12761179 0.40084356 prediction 0.647958697730428 Functional Gain - ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44511908 chr20:44511909 synonymous SNV . 0 22 hPsi_associated_SNPs_28819 0 0 1 0 0 nucleus 0.438718796684229 0.438717800373169 0 0 hPsi_site_22543 iPseU_CNN:0;iRNA_PseU:0 22544 chr6 96651671 96651671 1 + G A SKCM 96651670 + 96651650 96651690 41 AATGAGCTAAGCAAAAGCATTGAAATCCATACCTACGGGCA AATGAGCTAAGCAAAAGCATTAAAATCCATACCTACGGGCA < 41bp 0.440399261455722 0.823976611282753 0.6748971 0.84867054 prediction 0.647953222565506 Functional Gain - FUT9 ENSG00000172461 CDS Human protein_coding chr6:96651670 chr6:96651671 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28820 0 0 0 0 0 exosome 0.4386954469286 0.438725308313447 0.34754688 0 hPsi_site_22544 iPseU_CNN:0.34754688;iRNA_PseU:0 22545 chr11 5475615 5475615 1 + C A rs76300102 5475614 + 5475594 5475634 41 TAGCGCCAAGACAAAGGAAATCCGCCGAGCCATTTTCCGCA TAGCGCCAAGACAAAGGAAATACGCCGAGCCATTTTCCGCA < 41bp 0.493351415640838 0.823976356564795 0.24977049 0.5623948 prediction 0.647952713129589 Functional Gain - OR51I2 ENSG00000187918 CDS Human protein_coding chr11:5475614 chr11:5475615 synonymous SNV . 0 22 hPsi_associated_SNPs_28821 0 0 0 0 0 nucleus 0.438712990499617 0.438718670579534 0.1247896 0 hPsi_site_22545 iPseU_CNN:0.1247896;iRNA_PseU:0 22546 chr12 57626546 57626546 1 + G T COAD 57626545 + 57626525 57626565 41 GGCCCACATCAGTGGCCTGGTGGCTGCCAAGGTGATTCCCT GGCCCACATCAGTGGCCTGGTTGCTGCCAAGGTGATTCCCT < 41bp 0.508853682534197 0.832827880173816 0.17118645 0.2331383 prediction 0.647948395279239 Functional Gain - SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57626545 chr12:57626546 synonymous SNV . 0 22 hPsi_associated_SNPs_28822 0 0 1 0 2 Cytosol 0.438718592994806 0.438718593100218 0 0 hPsi_site_22546 iPseU_CNN:0;iRNA_PseU:0 22547 chr19 19221846 19221846 1 + C A rs4808921 19221845 + 19221825 19221865 41 GCCTGGGCTCAGAGTCCACGTCCAAACGCAAAGCTGGCAGC GCCTGGGCTCAGAGTCCACGTACAAACGCAAAGCTGGCAGC < 41bp 0.517792837977363 0.841763320148655 0.29559702 0.5632369 prediction 0.647940964342584 Functional Gain - SLC25A42 ENSG00000181035 UTR3 Human protein_coding chr19:19221845 chr19:19221846 . . 0 22 hPsi_associated_SNPs_28823 0 0 1 0 0 Endoplasmic reticulum 0.438718557969004 0.438718103009754 0.1264738 0 hPsi_site_22547 iPseU_CNN:0.1264738;iRNA_PseU:0 22548 chr12 13061706 13061706 1 + G T UCEC 13061705 + 13061685 13061725 41 CTTTCCGCTCCTCGTCGCAATGAAGACTTTGTCCTCCTGCT CTTTCCGCTCCTCGTCGCAATTAAGACTTTGTCCTCCTGCT < 41bp 0.507766609744023 0.831736884386128 0.13843101 0.20337391 prediction 0.647940549284211 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061705 chr12:13061706 stopgain 0.972 0 22 hPsi_associated_SNPs_28824 0 0 1 0 0 Nucleus 0.438743055304515 0.438718588971802 0 0 hPsi_site_22548 iPseU_CNN:0;iRNA_PseU:0 22549 chr12 53680186 53680186 1 + C A UCEC 53680185 + 53680165 53680205 41 TCCAAGCCTCTTGGATGAGATCTTGGCTCAAGCATACACAC TCCAAGCCTCTTGGATGAGATATTGGCTCAAGCATACACAC < 41bp 0.460339589483761 0.823968779431085 0.47826928 0.713135 prediction 0.64793755886217 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53680185 chr12:53680186 synonymous SNV . 0 22 hPsi_associated_SNPs_28825 0 0 1 0 0 Nucleus 0.438719132986297 0.438732645704307 0.42627 0 hPsi_site_22549 iPseU_CNN:0.42627;iRNA_PseU:0 22550 chr19 54377404 54377404 1 + G T LUAD 54377403 + 54377383 54377423 41 GCCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCT GCCGGCCCTGGAGTGGTGCGTTGCGGTGTACGCCATCTGCT < 41bp 0.504099320519113 0.828062930999908 0.33383486 0.78438425 prediction 0.647927220961591 Functional Gain - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377403 chr19:54377404 synonymous SNV . 0 22 hPsi_associated_SNPs_28826 0 0 1 0 0 Nucleus 0.438725283064874 0.437780004996295 0.5687685 0 hPsi_site_22550 iPseU_CNN:0.5687685;iRNA_PseU:0 22551 chr22 25024112 25024112 1 + G A GBM 25024111 + 25024091 25024131 41 CCAGGACGGCCAGGTCCGGATGGTGGTGGGAGCTGCTGGGG CCAGGACGGCCAGGTCCGGATAGTGGTGGGAGCTGCTGGGG < 41bp 0.409258014726839 0.82396215162586 0.2178241 0.73062915 prediction 0.64792430325172 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25024111 chr22:25024112 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_28827 0 0 1 0 1 exosome 0.438703739072099 0.438718524664622 0.4612583 0 hPsi_site_22551 iPseU_CNN:0.4612583;iRNA_PseU:0 22552 chr9 130860980 130860980 1 + C A COAD 130860979 + 130860959 130860999 41 CTTCATCCCCTCCCAGGAATTCTCCACCTACCGCCAGTGGA CTTCATCCCCTCCCAGGAATTATCCACCTACCGCCAGTGGA < 41bp 0.476607831157599 0.823961973680424 0.18165901 0.3143317 prediction 0.647923947360848 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130860979 chr9:130860980 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28828 0 0 0 0 2 Ribosome 0.438718561219984 0.439970395487584 0 0 hPsi_site_22552 iPseU_CNN:0;iRNA_PseU:0 22553 chrX 153418575 153418575 1 + G A SKCM 153418574 + 153418554 153418594 41 CAGCCCCGCCCATCTTTGGTTGGAGCAGGTAAGGGTGCGAG CAGCCCCGCCCATCTTTGGTTAGAGCAGGTAAGGGTGCGAG < 41bp 0.40309445873036 0.823958740917112 0.27570876 0.6738989 prediction 0.647917481834225 Functional Gain - OPN1LW ENSG00000102076 CDS Human protein_coding chrX:153418574 chrX:153418575 stopgain 0.997 1 22 hPsi_associated_SNPs_28829 0 0 0 0 1 unknown 0.438718464250736 0.439303831251472 0.3477978 0 hPsi_site_22553 iPseU_CNN:0.3477978;iRNA_PseU:0 22554 chr19 34663592 34663592 1 + C A UCEC 34663591 + 34663571 34663611 41 CGGCAGCAAGATCAGCCTCATCTCCAAGGCGGAGATCCGCT CGGCAGCAAGATCAGCCTCATATCCAAGGCGGAGATCCGCT < 41bp 0.485005415479158 0.82395851857737 0.36263338 0.6886459 prediction 0.64791703715474 Functional Gain - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34663591 chr19:34663592 synonymous SNV . 0 22 hPsi_associated_SNPs_28830 0 0 1 0 1 Cytosol 0.438717543886477 0.438805409965079 0.3772918 0 hPsi_site_22554 iPseU_CNN:0.3772918;iRNA_PseU:0 22555 chr16 56839461 56839461 1 + G A CESC 56839460 + 56839440 56839480 41 CATCGGGAGTCAATGTTGGTTGAGTGGGAGCAAGTGAAACA CATCGGGAGTCAATGTTGGTTAAGTGGGAGCAAGTGAAACA < 41bp 0.581214718278203 0.905172762975116 0.28773862 0.6921174 prediction 0.647916089393826 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56839460 chr16:56839461 nonsynonymous SNV 0.966 2 22 hPsi_associated_SNPs_28831 0 0 1 0 2 Nucleus 0.436908061813757 0.438718599203506 0.3842348 0 hPsi_site_22555 iPseU_CNN:0.3842348;iRNA_PseU:0 22556 chr11 120989055 120989055 1 + G A HNSC 120989054 + 120989034 120989074 41 GGAGGTGTTTTGGGATGACTTGAACTGCACCGTCAAGTGCC GGAGGTGTTTTGGGATGACTTAAACTGCACCGTCAAGTGCC < 41bp 0.576423007585113 0.900380052452599 0.27389926 0.48756996 prediction 0.647914089734972 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:120989054 chr11:120989055 synonymous SNV . 0 22 hPsi_associated_SNPs_28832 0 0 0 0 1 exosome 0.438717245515592 0.438718592995379 0 0 hPsi_site_22556 iPseU_CNN:0;iRNA_PseU:0 22557 chr16 454996 454996 1 + G A UCEC 454995 + 454975 455015 41 ACAGGAGGCGGCTCTGGGATTGGGTTCCGGATTGCTGAGAT ACAGGAGGCGGCTCTGGGATTAGGTTCCGGATTGCTGAGAT < 41bp 0.563673527642565 0.887627586519889 0.27909207 0.31809455 prediction 0.64790811775465 Functional Gain - DECR2 ENSG00000103202;ENSG00000242612 CDS Human other chr16:454995 chr16:454996 nonsynonymous SNV 0.995 3 22 hPsi_associated_SNPs_28833 0 0 1 0 2 Cytosol 0.43875078228324 0.438711435035033 0 0 hPsi_site_22557 iPseU_CNN:0;iRNA_PseU:0 22558 chr11 55419086 55419086 1 + C A LUAD 55419085 + 55419065 55419105 41 AAGGCAGGCGCAAAGCCCTCTCCACCTGTGGCTCCCACATT AAGGCAGGCGCAAAGCCCTCTACACCTGTGGCTCCCACATT < 41bp 0.517787195935761 0.84173607569965 0.27993178 0.42977843 prediction 0.647897759527777 Functional Gain - OR4S2 ENSG00000174982 CDS Human protein_coding chr11:55419085 chr11:55419086 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_28834 0 0 0 0 0 unknown 0.438718593096193 0.438718052589784 0 0 hPsi_site_22558 iPseU_CNN:0;iRNA_PseU:0 22559 chr1 228336397 228336397 1 + G A STAD 228336396 + 228336376 228336416 41 AAGCTCAAAGGACCGGCGCCTGAGGCTTGCTGTCTGTTCTC AAGCTCAAAGGACCGGCGCCTAAGGCTTGCTGTCTGTTCTC < 41bp 0.419555141936366 0.823948228495912 0.1810225 0.24357182 prediction 0.647896456991825 Functional Gain - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228336396 chr1:228336397 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_28835 0 0 1 0 1 Endoplasmic reticulum 0.438718592667558 0.438719535344597 0 0 hPsi_site_22559 iPseU_CNN:0;iRNA_PseU:0 22560 chr6 18465238 18465238 1 + C A UCEC 18465237 + 18465217 18465257 41 CCTGGCCTCCCCATGTATAATCTGTTGTGTCTGCAAGTCCT CCTGGCCTCCCCATGTATAATATGTTGTGTCTGCAAGTCCT < 41bp 0.513228547046041 0.837174730804236 0.23646075 0.31496102 prediction 0.64789236751639 Functional Gain - RNF144B ENSG00000137393 CDS Human protein_coding chr6:18465237 chr6:18465238 synonymous SNV . 0 22 hPsi_associated_SNPs_28836 0 0 1 0 1 Nucleus 0.437165291289134 0.438752076551235 0 0 hPsi_site_22560 iPseU_CNN:0;iRNA_PseU:0 22561 chr6 27222822 27222822 1 + C A READ 27222821 + 27222801 27222841 41 AGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACT AGGCTTTAGGATCCTCAGAATAAACTCTTCTTATCCGCACT < 41bp 0.464847059143007 0.823944938690717 0.6695177 0.70789003 prediction 0.647889877381434 Functional Gain - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27222821 chr6:27222822 stopgain 0.011 0 22 hPsi_associated_SNPs_28837 0 0 1 0 2 Cytosol 0.438718570112067 0.438718592299957 0.0767446599999999 0 hPsi_site_22561 iPseU_CNN:0.0767446599999999;iRNA_PseU:0 22562 chr19 24010482 24010482 1 + G A ESCA 24010481 + 24010461 24010501 41 GGGAGCTCACTCAGTGGGTTTGATGTGGTGGATGCTGGCTC GGGAGCTCACTCAGTGGGTTTAATGTGGTGGATGCTGGCTC < 41bp 0.58201974463054 0.905964638097994 0.3330084 0.64202785 prediction 0.647889786934909 Functional Gain - RPSAP58 ENSG00000205246 CDS Human other chr19:24010481 chr19:24010482 synonymous SNV . 0 22 hPsi_associated_SNPs_28838 0 0 0 0 0 Cytosol 0.462130454758213 0.43862869217683 0.2840557 0 hPsi_site_22562 iPseU_CNN:0.2840557;iRNA_PseU:0 22563 chr1 3394457 3394457 1 + G A GBM 3394456 + 3394436 3394476 41 CAGTCCCTCCCACTGATCTCTGCCTCCCGGTGGCTGCTGAA CAGTCCCTCCCACTGATCTCTACCTCCCGGTGGCTGCTGAA < 41bp 0.406091025685198 0.82394378864596 0.25882205 0.6396747 prediction 0.64788757729192 Functional Gain - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3394456 chr1:3394457 nonsynonymous SNV 0.967 2 22 hPsi_associated_SNPs_28839 0 0 1 0 1 Ribosome 0.438718609252828 0.43871859442318 0.2793494 0 hPsi_site_22563 iPseU_CNN:0.2793494;iRNA_PseU:0 22564 chr1 53668050 53668050 1 + G A BRCA 53668049 + 53668029 53668069 41 GGGATTGGAAAAGAACTGCATGAGCAGCTGGTTGCTCTGGA GGGATTGGAAAAGAACTGCATAAGCAGCTGGTTGCTCTGGA < 41bp 0.417491997524455 0.82394156356869 0.21508434 0.26665586 prediction 0.64788312713738 Functional Gain - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53668049 chr1:53668050 nonsynonymous SNV 0.148 1 22 hPsi_associated_SNPs_28840 0 0 1 0 2 Ribosome 0.438715424574367 0.438718592997038 0 0 hPsi_site_22564 iPseU_CNN:0;iRNA_PseU:0 22565 chr6 151247345 151247345 1 + C A UCEC 151247344 + 151247324 151247364 41 GCTTGCAGATGAAATTGAAATCTATGGCAAAAGCAAAGCCA GCTTGCAGATGAAATTGAAATATATGGCAAAAGCAAAGCCA < 41bp 0.462038952900546 0.823934776511043 0.49542952 0.60035664 prediction 0.647869553022086 Functional Gain - MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151247344 chr6:151247345 synonymous SNV . 0 22 hPsi_associated_SNPs_28841 0 0 0 0 2 Cytosol 0.438707785070818 0.438577598617957 0.20071328 0 hPsi_site_22565 iPseU_CNN:0.20071328;iRNA_PseU:0 22566 chrX 117872087 117872087 1 + C A rs2247035 117872086 + 117872066 117872106 41 TAATGCAGTGCAATAGGAATTCTTTGTTTCCACAAGGCCTT TAATGCAGTGCAATAGGAATTATTTGTTTCCACAAGGCCTT < 41bp 0.485853664419761 0.823932010599956 0.30974123 0.36770818 prediction 0.647864021199912 Functional Gain - IL13RA1 ENSG00000239182 ncRNA_exonic Human snoRNA chrX:117872086 chrX:117872087 . . 0 22 hPsi_associated_SNPs_28842 0 0 0 0 0 Endoplasmic reticulum 0.438718607213216 0.438653126947699 0 0 hPsi_site_22566 iPseU_CNN:0;iRNA_PseU:0 22567 chr6 47682198 47682198 1 + G A UCEC 47682197 + 47682177 47682217 41 AAGTTCTGGACTACATCACCTGCATTGGGCTCAGCGTCTCA AAGTTCTGGACTACATCACCTACATTGGGCTCAGCGTCTCA < 41bp 0.401334515692899 0.823931246744482 0.33211604 0.51043785 prediction 0.647862493488964 Functional Gain - ADGRF4 ENSG00000153294 CDS Human protein_coding chr6:47682197 chr6:47682198 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_28843 0 0 0 0 0 exosome 0.438046531525266 0.438396748110685 0.0208756999999999 0 hPsi_site_22567 iPseU_CNN:0.0208756999999999;iRNA_PseU:0 22568 chr5 140021512 140021512 1 + G A KIRP 140021511 + 140021491 140021531 41 GACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGT GACCAGCAACCAGGCCCTGCTACAGCTTGAGGCGGCTCGGT < 41bp 0.403972814754601 0.823914899873554 0.4893353 0.66221726 prediction 0.647829799747109 Functional Gain - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140021511 chr5:140021512 synonymous SNV . 0 22 hPsi_associated_SNPs_28844 0 0 0 1 1 chromatin 0.438718614819476 0.43871860388334 0.32443452 0 hPsi_site_22568 iPseU_CNN:0.32443452;iRNA_PseU:0 22569 chr9 82323621 82323621 1 + G T UCEC 82323620 + 82323600 82323640 41 AGCCCCGGAGCGGCCTACGCTGGGCTCCACAACATCTCCCC AGCCCCGGAGCGGCCTACGCTTGGCTCCACAACATCTCCCC < 41bp 0.502537441813203 0.826452140627939 0.35332713 0.45471978 prediction 0.647829397629473 Functional Gain - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82323620 chr9:82323621 nonsynonymous SNV 0.334 4 22 hPsi_associated_SNPs_28845 0 0 0 0 1 Endoplasmic reticulum 0.438720346015965 0.438755154334309 0 0 hPsi_site_22569 iPseU_CNN:0;iRNA_PseU:0 22570 chr11 32608636 32608636 1 + G A BLCA 32608635 + 32608615 32608655 41 TCGGAAGGTGGACTTCATGTTGATTTAGCTCAAATTATTGA TCGGAAGGTGGACTTCATGTTAATTTAGCTCAAATTATTGA < 41bp 0.575337467229791 0.899249926967558 0.24031505 0.63971096 prediction 0.647824919475534 Functional Gain - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32608635 chr11:32608636 nonsynonymous SNV 0.910 2 22 hPsi_associated_SNPs_28846 0 0 1 0 2 Cytosol 0.438718893473303 0.438718188115424 0.27942192 0 hPsi_site_22570 iPseU_CNN:0.27942192;iRNA_PseU:0 22571 chr17 47230240 47230240 1 + G A LUSC 47230239 + 47230219 47230259 41 CCCAGTCCACGGAGTGGAGGTGATGCCCCTGCACACGGTTC CCCAGTCCACGGAGTGGAGGTAATGCCCCTGCACACGGTTC < 41bp 0.394664775429743 0.823912395859169 0.31352228 0.71637714 prediction 0.647824791718338 Functional Gain - B4GALNT2 ENSG00000167080 CDS Human protein_coding chr17:47230239 chr17:47230240 synonymous SNV . 0 22 hPsi_associated_SNPs_28847 0 0 0 0 2 nucleolus 0.435998168635775 0.438065387781856 0.43275428 0 hPsi_site_22571 iPseU_CNN:0.43275428;iRNA_PseU:0 22572 chr1 231954135 231954135 1 + G T UCEC 231954136 - 231954116 231954156 41 AGGAGTCCCTCCAGCCCTTCTCTCTCTGATGTTAATGATCT AGGAGTCCCTCCAGCCCTTCTATCTCTGATGTTAATGATCT < 41bp 0.523349553564585 0.847259762668509 0.2745012 0.3481363 prediction 0.647820418207847 Functional Gain - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231954136 chr1:231954135 nonsynonymous SNV 0.928 4 22 hPsi_associated_SNPs_28848 0 0 0 0 0 Nucleus 0.438718592989354 0.438718592880161 0 0 hPsi_site_22572 iPseU_CNN:0;iRNA_PseU:0 22573 chr4 186320752 186320752 1 + G A CESC 186320751 + 186320731 186320771 41 AATAAGAACGGGCAAACAGCTGAAGATCTCGCTTGGTCATG AATAAGAACGGGCAAACAGCTAAAGATCTCGCTTGGTCATG < 41bp 0.431186356576482 0.82389934879537 0.2410605 0.56094456 prediction 0.64779869759074 Functional Gain - ANKRD37 ENSG00000186352 CDS Human protein_coding chr4:186320751 chr4:186320752 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28849 0 0 0 0 1 chromatin 0.438793014698202 0.438495776182046 0.12188912 0 hPsi_site_22573 iPseU_CNN:0.12188912;iRNA_PseU:0 22574 chr10 94070946 94070946 1 + G A CESC 94070945 + 94070925 94070965 41 TGATAGAACAGCTGAATGGGTGAGACCATGCAGGTGCAGAG TGATAGAACAGCTGAATGGGTAAGACCATGCAGGTGCAGAG < 41bp 0.504040854995958 0.827932018226304 0.27071878 0.6232042 prediction 0.647782326460692 Functional Gain - MARCH5 ENSG00000198060 CDS Human protein_coding chr10:94070945 chr10:94070946 synonymous SNV . 0 22 hPsi_associated_SNPs_28850 0 0 1 0 1 Ribosome 0.438718593422024 0.438716630613228 0.2464084 0 hPsi_site_22574 iPseU_CNN:0.2464084;iRNA_PseU:0 22575 chr5 140189056 140189056 1 + G A CESC 140189055 + 140189035 140189075 41 AGGCCGAGGGTGTGCTCTGGTGAGGGCCCACCCAAGACCGA AGGCCGAGGGTGTGCTCTGGTAAGGGCCCACCCAAGACCGA < 41bp 0.422381706479595 0.823889728128891 0.24137458 0.45826042 prediction 0.647779456257783 Functional Gain - PCDHA4 ENSG00000204967 CDS Human protein_coding chr5:140189055 chr5:140189056 nonsynonymous SNV 0.982 2 22 hPsi_associated_SNPs_28851 0 0 0 0 0 insoluble cytoplasm 0.43870313146907 0.438718595742814 0 0 hPsi_site_22575 iPseU_CNN:0;iRNA_PseU:0 22576 chr19 56369376 56369376 1 + C A LUAD 56369375 + 56369355 56369395 41 CGAGTTTGGCTGACTTGATTTCCAGAGAGTGGCCTGACCCC CGAGTTTGGCTGACTTGATTTACAGAGAGTGGCCTGACCCC < 41bp 0.449538428232353 0.823888430566922 0.29049492 0.5002253 prediction 0.647776861133843 Functional Gain - NLRP4 ENSG00000160505 CDS Human protein_coding chr19:56369375 chr19:56369376 nonsynonymous SNV 0.004 3 22 hPsi_associated_SNPs_28852 0 0 0 0 0 exosome 0.438679383995166 0.438697795441539 0.000450599999999968 0 hPsi_site_22576 iPseU_CNN:0.000450599999999968;iRNA_PseU:0 22577 chr19 41118028 41118028 1 + G A BLCA 41118027 + 41118007 41118047 41 ATGCCCTGGGCAGGAGTGTGTGAACTCGCCCGGCTCCTTCC ATGCCCTGGGCAGGAGTGTGTAAACTCGCCCGGCTCCTTCC < 41bp 0.431262079960513 0.823884936194951 0.34770203 0.5490029 prediction 0.647769872389903 Functional Gain - LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41118027 chr19:41118028 synonymous SNV . 0 22 hPsi_associated_SNPs_28853 0 0 1 0 2 Cytosol 0.438718593756146 0.43871859299967 0.0980057999999999 0 hPsi_site_22577 iPseU_CNN:0.0980057999999999;iRNA_PseU:0 22578 chr12 8329650 8329650 1 + G A LUAD 8329649 + 8329629 8329669 41 GTAATGATTCGGGAGAAGATTGCACTCACAGTTCCACAATA GTAATGATTCGGGAGAAGATTACACTCACAGTTCCACAATA < 41bp 0.554975648964145 0.878857319446224 0.24345204 0.4190368 prediction 0.647763340964159 Functional Gain - ZNF705A ENSG00000196946 CDS Human protein_coding chr12:8329649 chr12:8329650 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_28854 0 0 0 0 1 exosome 0.438718406301929 0.438718614269509 0 0 hPsi_site_22578 iPseU_CNN:0;iRNA_PseU:0 22579 chr3 44905724 44905724 1 + G A BLCA 44905723 + 44905703 44905743 41 ATGCGTCTTAGGCATTATTGTGATGGCGAGCACCAATTCTC ATGCGTCTTAGGCATTATTGTAATGGCGAGCACCAATTCTC < 41bp 0.407823898295994 0.823880130948089 0.30766135 0.7134955 prediction 0.647760261896178 Functional Gain - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44905723 chr3:44905724 synonymous SNV . 0 22 hPsi_associated_SNPs_28855 0 0 1 0 1 exosome 0.439557564341661 0.430691386267025 0.426991 0 hPsi_site_22579 iPseU_CNN:0.426991;iRNA_PseU:0 22580 chr17 27014197 27014197 1 + G A COAD 27014196 + 27014176 27014216 41 TGATTGAATTTGCCCAGGTGTGCAGTTCCGATGAAGACATC TGATTGAATTTGCCCAGGTGTACAGTTCCGATGAAGACATC < 41bp 0.409737854836292 0.823871605992026 0.30740985 0.58138627 prediction 0.647743211984052 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27014196 chr17:27014197 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28856 0 0 1 0 2 Cytosol 0.438702131804826 0.43869985175313 0.16277254 0 hPsi_site_22580 iPseU_CNN:0.16277254;iRNA_PseU:0 22581 chr19 12739611 12739611 1 + C A UCS 12739610 + 12739590 12739630 41 AATGTGCAAAAACCTTCATTTCTCTTGAGAACTTTCGAAGA AATGTGCAAAAACCTTCATTTATCTTGAGAACTTTCGAAGA < 41bp 0.474595776199221 0.823871480898874 0.35540468 0.6247845 prediction 0.647742961797748 Functional Gain - ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12739610 chr19:12739611 nonsynonymous SNV 0.062 0 22 hPsi_associated_SNPs_28857 0 0 1 0 0 Cytosol 0.438656645761528 0.438718380210808 0.249569 0 hPsi_site_22581 iPseU_CNN:0.249569;iRNA_PseU:0 22582 chr7 94183853 94183853 1 + C A LUSC 94183852 + 94183832 94183872 41 ATGCCCGTTCAGTTTACAGTTCATTTTTTGCTTGGTTTGGA ATGCCCGTTCAGTTTACAGTTAATTTTTTGCTTGGTTTGGA < 41bp 0.479405115240217 0.823866866013218 0.28219593 0.33431712 prediction 0.647733732026436 Functional Gain - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94183852 chr7:94183853 stopgain 0.993 1 22 hPsi_associated_SNPs_28858 0 0 1 0 2 Cytosol 0.43839775915735 0.438707815865379 0 0 hPsi_site_22582 iPseU_CNN:0;iRNA_PseU:0 22583 chr8 48887464 48887464 1 + G A BRCA 48887463 + 48887443 48887483 41 ACGCCTCCATCGGGAAGCTCTGAAGCAGTCTGCAACTGATC ACGCCTCCATCGGGAAGCTCTAAAGCAGTCTGCAACTGATC < 41bp 0.399836984860022 0.823862405652883 0.17257962 0.26302433 prediction 0.647724811305765 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48887463 chr8:48887464 synonymous SNV . 0 22 hPsi_associated_SNPs_28859 0 0 1 0 1 Cytosol 0.438748202228708 0.443799112007298 0 0 hPsi_site_22583 iPseU_CNN:0;iRNA_PseU:0 22584 chr13 50204979 50204979 1 + G A rs138452698 50204978 + 50204958 50204998 41 GGCACCTGATGCACTTCCGCTGCTTAAGATCAGAAACAGGC GGCACCTGATGCACTTCCGCTACTTAAGATCAGAAACAGGC < 41bp 0.405545348116043 0.823843670143672 0.26602376 0.3859135 prediction 0.647687340287344 Functional Gain - ARL11 ENSG00000152213 CDS Human protein_coding chr13:50204978 chr13:50204979 synonymous SNV . 0 22 hPsi_associated_SNPs_28860 0 0 0 0 0 Nucleus 0.438718593112606 0.438718598353151 0 0 hPsi_site_22584 iPseU_CNN:0;iRNA_PseU:0 22585 chr14 20216125 20216125 1 + G A UCEC 20216124 + 20216104 20216144 41 ATGAACTGGACAACTTCTACTGTGATGTCCCACAAGTCATC ATGAACTGGACAACTTCTACTATGATGTCCCACAAGTCATC < 41bp 0.425415623207611 0.823841527677025 0.32151914 0.3888289 prediction 0.647683055354051 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216124 chr14:20216125 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28861 0 0 0 0 0 unknown 0.435927471096741 0.438500623580765 0 0 hPsi_site_22585 iPseU_CNN:0;iRNA_PseU:0 22586 chr19 18779617 18779617 1 + C A UCEC 18779616 + 18779596 18779636 41 CATCTCGGGTGGCTACGGGATCTCAGTGGAGGACAAGAAGG CATCTCGGGTGGCTACGGGATATCAGTGGAGGACAAGAAGG < 41bp 0.532314099772816 0.856153716599468 0.44085193 0.5065318 prediction 0.647679233653304 Functional Gain - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18779616 chr19:18779617 synonymous SNV . 0 22 hPsi_associated_SNPs_28862 0 0 1 0 0 chromatin 0.438718592250858 0.438711839273169 0.0130636 0 hPsi_site_22586 iPseU_CNN:0.0130636;iRNA_PseU:0 22587 chr21 47423660 47423660 1 + G A rs111451684 47423659 + 47423639 47423679 41 CGCTGCCAAGAAGAGGCTGCTGCTCTTCTCAGATGGCAACT CGCTGCCAAGAAGAGGCTGCTACTCTTCTCAGATGGCAACT < 41bp 0.418024617314481 0.823836262768563 0.3437783 0.6436217 prediction 0.647672525537126 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47423659 chr21:47423660 synonymous SNV . 0 22 hPsi_associated_SNPs_28863 0 0 1 0 0 exosome 0.438720142587608 0.438748165009111 0.2872434 0 hPsi_site_22587 iPseU_CNN:0.2872434;iRNA_PseU:0 22588 chr19 48956192 48956192 1 + G A BLCA 48956191 + 48956171 48956211 41 GCACCAGGGCGAGACCGAGCTGAAGGAGCTGCACTGGCACC GCACCAGGGCGAGACCGAGCTAAAGGAGCTGCACTGGCACC < 41bp 0.535976415836257 0.85981120674858 0.52523357 0.6135401 prediction 0.647669581824646 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48956191 chr19:48956192 synonymous SNV . 0 22 hPsi_associated_SNPs_28864 0 0 1 0 0 Ribosome 0.438718520925733 0.438719235846564 0.17661306 0 hPsi_site_22588 iPseU_CNN:0.17661306;iRNA_PseU:0 22589 chr6 96034364 96034364 1 + C A LUAD 96034363 + 96034343 96034383 41 ATCATTTTGGCACTTTTTATTCTATTTATTTTCTCTCTGAT ATCATTTTGGCACTTTTTATTATATTTATTTTCTCTCTGAT < 41bp 0.507414198953948 0.831248169928725 0.22931308 0.24404281 prediction 0.647667941949556 Functional Gain - MANEA ENSG00000172469 CDS Human protein_coding chr6:96034363 chr6:96034364 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28865 0 0 1 0 1 Ribosome 0.438719033514035 0.438718594024117 0 0 hPsi_site_22589 iPseU_CNN:0;iRNA_PseU:0 22590 chr11 55595372 55595372 1 + G A LUSC 55595371 + 55595351 55595391 41 GCTAATTCTCACCACTATCCTGAAGATACACTCTGCAGAGA GCTAATTCTCACCACTATCCTAAAGATACACTCTGCAGAGA < 41bp 0.432212050759841 0.823833799688128 0.25295973 0.61474764 prediction 0.647667599376257 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595371 chr11:55595372 synonymous SNV . 0 22 hPsi_associated_SNPs_28866 0 0 0 0 0 unknown 0.438720806977403 0.438706669116535 0.22949528 0 hPsi_site_22590 iPseU_CNN:0.22949528;iRNA_PseU:0 22591 chr14 24843036 24843036 1 + C A LIHC 24843035 + 24843015 24843055 41 GCCCCAGGGCGGCGGGAAGGTCGTCTCAGTACAGGCAGCAT GCCCCAGGGCGGCGGGAAGGTAGTCTCAGTACAGGCAGCAT < 41bp 0.508978808160142 0.83280990942794 0.23404771 0.932045 prediction 0.647662202535596 Functional Gain - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24843035 chr14:24843036 synonymous SNV . 0 22 hPsi_associated_SNPs_28867 0 0 0 0 1 cytosol 0.438718707421166 0.438718633826377 0.86409 0 hPsi_site_22591 iPseU_CNN:0.86409;iRNA_PseU:0 22592 chrX 148796170 148796170 1 + C A LUAD 148796169 + 148796149 148796189 41 TATGTTCTCAGAGGACGACTTCCAGTCAACAGAAAGAGCCC TATGTTCTCAGAGGACGACTTACAGTCAACAGAAAGAGCCC < 41bp 0.474090450754729 0.823830308246682 0.3027919 0.6897075 prediction 0.647660616493364 Functional Gain - MAGEA11 ENSG00000185247 CDS Human protein_coding chrX:148796169 chrX:148796170 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_28868 0 0 0 0 2 exosome 0.438718578145967 0.438593947164652 0.379415 0 hPsi_site_22592 iPseU_CNN:0.379415;iRNA_PseU:0 22593 chr16 57741510 57741510 1 + G T CESC 57741509 + 57741489 57741529 41 CATAGCTACAGCACCCAGGATGAGCACTTCCTGGGCATCGA CATAGCTACAGCACCCAGGATTAGCACTTCCTGGGCATCGA < 41bp 0.494664970778671 0.823827733881768 0.3276177 0.54888266 prediction 0.647655467763535 Functional Gain - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57741509 chr16:57741510 stopgain 0.442 0 22 hPsi_associated_SNPs_28869 0 0 0 0 1 cytosol 0.438718593855593 0.438718592995498 0.0977653199999999 0 hPsi_site_22593 iPseU_CNN:0.0977653199999999;iRNA_PseU:0 22594 chr14 20389351 20389351 1 + G A SKCM 20389350 + 20389330 20389370 41 TGCCTGGACTCTTACATCATTGAAATACTAATTGTGGTCAA TGCCTGGACTCTTACATCATTAAAATACTAATTGTGGTCAA < 41bp 0.555214866181805 0.879041602809059 0.2748838 0.21754327 prediction 0.647653473254509 Functional Gain - OR4K5 ENSG00000176281 CDS Human protein_coding chr14:20389350 chr14:20389351 nonsynonymous SNV 0.079 2 22 hPsi_associated_SNPs_28870 0 0 0 0 0 unknown 0.438718594317199 0.43872007540106 0 0 hPsi_site_22594 iPseU_CNN:0;iRNA_PseU:0 22595 chr18 9886715 9886715 1 + C A CESC 9886714 + 9886694 9886734 41 TCCACATGCGCACAGAGGAGTCTGATGCCTCACAGGAGGGC TCCACATGCGCACAGAGGAGTATGATGCCTCACAGGAGGGC < 41bp 0.462846237146369 0.823824186880023 0.34291536 0.6102687 prediction 0.647648373760047 Functional Gain - TXNDC2 ENSG00000168454 CDS Human protein_coding chr18:9886714 chr18:9886715 nonsynonymous SNV 0.033 2 22 hPsi_associated_SNPs_28871 0 0 0 0 0 exosome 0.43886591677984 0.438990385060536 0.2205374 0 hPsi_site_22595 iPseU_CNN:0.2205374;iRNA_PseU:0 22596 chr6 117589606 117589606 1 + C A rs201818972 117589605 + 117589585 117589625 41 AGCCAACCCAGCAGCTACTCTCCTAGCTGTACCAGCAGCAA AGCCAACCCAGCAGCTACTCTACTAGCTGTACCAGCAGCAA < 41bp 0.446590705148033 0.823820656898346 0.20299995 0.5102307 prediction 0.647641313796692 Functional Gain - VGLL2 ENSG00000170162 CDS Human protein_coding chr6:117589605 chr6:117589606 nonsynonymous SNV 0.974 0 22 hPsi_associated_SNPs_28872 0 0 0 0 1 exosome 0.438718592995099 0.438718593568994 0.0204614000000001 0 hPsi_site_22596 iPseU_CNN:0.0204614000000001;iRNA_PseU:0 22597 chr11 56020158 56020158 1 + G A LUAD 56020157 + 56020137 56020177 41 AGCCATCTACAACCCTCTCCTGTATTCAGTGAGCATGTCAC AGCCATCTACAACCCTCTCCTATATTCAGTGAGCATGTCAC < 41bp 0.56012607550114 0.883941235574248 0.22780123 0.28831977 prediction 0.647630320146215 Functional Gain - OR5T3 ENSG00000172489 CDS Human protein_coding chr11:56020157 chr11:56020158 synonymous SNV . 0 22 hPsi_associated_SNPs_28873 0 0 0 0 0 unknown 0.438718616120932 0.438718593747732 0 0 hPsi_site_22597 iPseU_CNN:0;iRNA_PseU:0 22598 chr21 43519111 43519111 1 + C A UCEC 43519110 + 43519090 43519130 41 AAGTATCCTGGCGTTTAAATTCTACACAGAACCACACTTTC AAGTATCCTGGCGTTTAAATTATACACAGAACCACACTTTC < 41bp 0.5358485380247 0.859662532421125 0.41594598 0.5494127 prediction 0.647627988792851 Functional Gain - UMODL1 ENSG00000177398 CDS Human protein_coding chr21:43519110 chr21:43519111 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_28874 0 0 0 0 1 exosome 0.438776885698151 0.439059187113744 0.0988254 0 hPsi_site_22598 iPseU_CNN:0.0988254;iRNA_PseU:0 22599 chr20 36149769 36149769 1 + C T LUAD 36149770 - 36149750 36149790 41 GAAGATGTACCAGCCGATGATGAGCAGTTCAGCCGAGGCCG GAAGATGTACCAGCCGATGATAAGCAGTTCAGCCGAGGCCG < 41bp 0.469746227284422 0.823812415875373 0.2380591 0.25976014 prediction 0.647624831750747 Functional Gain - NNAT ENSG00000053438 CDS Human protein_coding chr20:36149770 chr20:36149769 synonymous SNV . 0 22 hPsi_associated_SNPs_28875 0 0 1 0 2 exosome 0.438309858309067 0.444163168847839 0 0 hPsi_site_22599 iPseU_CNN:0;iRNA_PseU:0 22600 chr9 138439772 138439772 1 + C A UCEC 138439771 + 138439751 138439791 41 GCCCGGGACGGACGACTACGTCTTTTACTGCAAAGACCAGC GCCCGGGACGGACGACTACGTATTTTACTGCAAAGACCAGC < 41bp 0.453193542900685 0.823812009212919 0.34915823 0.6826608 prediction 0.647624018425839 Functional Gain - OBP2A ENSG00000122136 CDS Human protein_coding chr9:138439771 chr9:138439772 nonsynonymous SNV 0.006 0 22 hPsi_associated_SNPs_28876 0 0 0 0 2 unknown 0.438718592989584 0.438718592995631 0.3653216 0 hPsi_site_22600 iPseU_CNN:0.3653216;iRNA_PseU:0 22601 chr4 89314703 89314703 1 + G A HNSC 89314702 + 89314682 89314722 41 TAGGTGTGGTTTATATCAGCTGTGGTGATGCACACACTGCG TAGGTGTGGTTTATATCAGCTATGGTGATGCACACACTGCG < 41bp 0.400581733869885 0.82381147463482 0.27547273 0.31255627 prediction 0.64762294926964 Functional Gain - HERC6 ENSG00000138642 CDS Human protein_coding chr4:89314702 chr4:89314703 nonsynonymous SNV 0.948 5 22 hPsi_associated_SNPs_28877 0 0 0 1 2 Cytosol 0.438697304439551 0.438706361482397 0 0 hPsi_site_22601 iPseU_CNN:0;iRNA_PseU:0 22602 chr17 76499133 76499133 1 + G A rs373434223 76499132 + 76499112 76499152 41 GTGACCAATACAGCCATGTGTGCCTGCCTCTAGTTCCAATA GTGACCAATACAGCCATGTGTACCTGCCTCTAGTTCCAATA < 41bp 0.524491288130756 0.848302109421279 0.24513197 0.32974786 prediction 0.647621642581046 Functional Gain - DNAH17-AS1 ENSG00000268470 UTR3 Human other chr17:76499132 chr17:76499133 . . 0 22 hPsi_associated_SNPs_28878 0 0 0 0 0 unknown 0.434901362332203 0.4385717385204 0 0 hPsi_site_22602 iPseU_CNN:0;iRNA_PseU:0 22603 chr5 140595771 140595771 1 + G A MESO 140595770 + 140595750 140595790 41 GCTCACCGTCTACCTGGTGGTGGCGTTGGCCTCGGTGTCTT GCTCACCGTCTACCTGGTGGTAGCGTTGGCCTCGGTGTCTT < 41bp 0.431230361181277 0.823809499626808 0.30748177 0.7332804 prediction 0.647618999253617 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595770 chr5:140595771 synonymous SNV . 0 22 hPsi_associated_SNPs_28879 0 0 0 0 0 exosome 0.438703725567358 0.4387189520543 0.4665608 0 hPsi_site_22603 iPseU_CNN:0.4665608;iRNA_PseU:0 22604 chr18 12706645 12706645 1 + C A UCEC 12706644 + 12706624 12706664 41 GGTTACTTCTATACCGATTGTCTTGTGCCAATGGTTGGAAA GGTTACTTCTATACCGATTGTATTGTGCCAATGGTTGGAAA < 41bp 0.471370354102107 0.823805610296102 0.43761086 0.45455474 prediction 0.647611220592204 Functional Gain - PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12706644 chr18:12706645 nonsynonymous SNV 0.982 2 22 hPsi_associated_SNPs_28880 0 0 1 0 2 Ribosome 0.438719855821589 0.437810961807829 0 0 hPsi_site_22604 iPseU_CNN:0;iRNA_PseU:0 22605 chr17 7320731 7320731 1 + G A rs139407430 7320730 + 7320710 7320750 41 GCGGGACCGGCGGCAGGAGCTGCGGTGCAGGCGGCTTAGCC GCGGGACCGGCGGCAGGAGCTACGGTGCAGGCGGCTTAGCC < 41bp 0.573004771230185 0.896805413825192 0.37111363 0.6276579 prediction 0.647601285190013 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320730 chr17:7320731 synonymous SNV . 0 22 hPsi_associated_SNPs_28881 0 0 1 0 0 chromatin 0.438720179023328 0.438812840232227 0.2553158 0 hPsi_site_22605 iPseU_CNN:0.2553158;iRNA_PseU:0 22606 chrX 102632603 102632603 1 + G A BLCA 102632602 + 102632582 102632622 41 CAGATCAATGATGGGATGGGTGGAGATGGAGATGATATGGA CAGATCAATGATGGGATGGGTAGAGATGGAGATGATATGGA < 41bp 0.570419013073965 0.894206454961647 0.32971948 0.44089055 prediction 0.647574883775363 Functional Gain - BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632602 chrX:102632603 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28882 0 0 1 0 0 Cytosol 0.438718562357534 0.438718939328747 0 0 hPsi_site_22606 iPseU_CNN:0;iRNA_PseU:0 22607 chr17 79203090 79203090 1 + G T SARC 79203091 - 79203071 79203111 41 GTCTCGTCCCGGAGCCCTGCTCCCTCATCTGGGATGCCGTC GTCTCGTCCCGGAGCCCTGCTACCTCATCTGGGATGCCGTC < 41bp 0.540846514315925 0.864629910956661 0.29229003 0.63532865 prediction 0.647566793281472 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79203091 chr17:79203090 nonsynonymous SNV 0.114 0 22 hPsi_associated_SNPs_28883 0 0 0 0 0 chromatin 0.438719507589362 0.438718324747971 0.2706573 0 hPsi_site_22607 iPseU_CNN:0.2706573;iRNA_PseU:0 22608 chr7 89794038 89794038 1 + C A GBM 89794037 + 89794017 89794057 41 TTAACAAAACTGAGATATGTTCCCAGTTGTAGAATTACTGT TTAACAAAACTGAGATATGTTACCAGTTGTAGAATTACTGT < 41bp 0.488404700221108 0.823782664089551 0.17892194 0.23927772 prediction 0.647565328179103 Functional Gain - STEAP1 ENSG00000164647 CDS Human protein_coding chr7:89794037 chr7:89794038 nonsynonymous SNV 0.970 1 22 hPsi_associated_SNPs_28884 0 0 1 0 0 Endoplasmic reticulum 0.438695337090237 0.438614655050946 0 0 hPsi_site_22608 iPseU_CNN:0;iRNA_PseU:0 22609 chr1 174417938 174417938 1 + G A UCEC 174417937 + 174417917 174417957 41 ACTTCCACATTTTCAAAATTTGCCGTCAGCACACCAAAGAG ACTTCCACATTTTCAAAATTTACCGTCAGCACACCAAAGAG < 41bp 0.444676110926695 0.823782574825426 0.2518981 0.36123803 prediction 0.647565149650851 Functional Gain - GPR52 ENSG00000203737 CDS Human protein_coding chr1:174417937 chr1:174417938 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28885 0 0 0 0 0 exosome 0.438718587331241 0.438718581966822 0 0 hPsi_site_22609 iPseU_CNN:0;iRNA_PseU:0 22610 chr11 101946692 101946692 1 + G A ESCA 101946691 + 101946671 101946711 41 TTTGTCTTTTCAAACATCTTTGCCTTGGTGGAGCCCTTTGT TTTGTCTTTTCAAACATCTTTACCTTGGTGGAGCCCTTTGT < 41bp 0.409333428428433 0.823782048245328 0.265109 0.38462675 prediction 0.647564096490655 Functional Gain - C11orf70 ENSG00000137691 CDS Human protein_coding chr11:101946691 chr11:101946692 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28886 0 0 0 1 2 exosome 0.438718594683241 0.438718593844769 0 0 hPsi_site_22610 iPseU_CNN:0;iRNA_PseU:0 22611 chr11 66136495 66136495 1 + G A rs186779316 66136494 + 66136474 66136514 41 ATGAGGCCAGGCTGAAGCCCTGCATAGGCTGGCTGGAGAGG ATGAGGCCAGGCTGAAGCCCTACATAGGCTGGCTGGAGAGG < 41bp 0.531612922492785 0.855394230472348 0.31115732 0.5549641 prediction 0.647562615959126 Functional Gain - SLC29A2 ENSG00000174669 intronic Human protein_coding chr11:66136494 chr11:66136495 . . 0 22 hPsi_associated_SNPs_28887 0 0 0 0 0 Cytosol 0.438718098928081 0.438716046704059 0.1099282 0 hPsi_site_22611 iPseU_CNN:0.1099282;iRNA_PseU:0 22612 chr20 31393192 31393192 1 + G A SKCM 31393191 + 31393171 31393211 41 ACTCGAGCTGCAGGACTGCTTGGAATACAATAGGATAGCCA ACTCGAGCTGCAGGACTGCTTAGAATACAATAGGATAGCCA < 41bp 0.434385484306778 0.82378025763658 0.31837702 0.5400085 prediction 0.647560515273161 Functional Gain - DNMT3B ENSG00000088305 CDS Human protein_coding chr20:31393191 chr20:31393192 synonymous SNV . 0 22 hPsi_associated_SNPs_28888 0 0 1 0 2 chromatin 0.438741639408171 0.438612657450707 0.080017 0 hPsi_site_22612 iPseU_CNN:0.080017;iRNA_PseU:0 22613 chr10 12148305 12148305 1 + G T ACC 12148304 + 12148284 12148324 41 TTTGAATATGGGATGAGCATTGAGAGCCCAAAGTTACTGCC TTTGAATATGGGATGAGCATTTAGAGCCCAAAGTTACTGCC < 41bp 0.516716345913261 0.840496074614503 0.30262288 0.68989056 prediction 0.647559457402483 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12148304 chr10:12148305 stopgain 0.985 1 22 hPsi_associated_SNPs_28889 0 0 0 0 2 Endoplasmic reticulum 0.438718948782479 0.438718580722617 0.37978112 0 hPsi_site_22613 iPseU_CNN:0.37978112;iRNA_PseU:0 22614 chr16 732723 732723 1 + G A rs571827675 732722 + 732702 732742 41 AGGCCATTGCCGCCACTATCTGTGTAATAAAATCCGTGAGC AGGCCATTGCCGCCACTATCTATGTAATAAAATCCGTGAGC < 41bp 0.503787138033644 0.827562054845152 0.23425123 0.25836313 prediction 0.647549833623016 Functional Gain - JMJD8;STUB1 ENSG00000103266;ENSG00000161999 UTR3 Human other chr16:732722 chr16:732723 . . 0 22 hPsi_associated_SNPs_28890 0 0 1 0 0 unknown 0.438718592433546 0.438718504622424 0 0 hPsi_site_22614 iPseU_CNN:0;iRNA_PseU:0 22615 chr17 33289102 33289102 1 + G A SKCM 33289101 + 33289081 33289121 41 GAAGAGGAGGAGGAAGGAGATGGAGAAAGAAAAAGGGGGGA GAAGAGGAGGAGGAAGGAGATAGAGAAAGAAAAAGGGGGGA < 41bp 0.573396927345156 0.89716711277383 0.33888853 0.4434523 prediction 0.647540370857348 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33289101 chr17:33289102 nonsynonymous SNV 0.178 1 22 hPsi_associated_SNPs_28891 0 0 0 0 0 Cytosol 0.43871859300074 0.438718592995101 0 0 hPsi_site_22615 iPseU_CNN:0;iRNA_PseU:0 22616 chr20 62588002 62588002 1 + G A rs550933437 62588001 + 62587981 62588021 41 GTTCGGCAGCCTCCGCCACGTGCCTGGAGGGCCCCGCCCCC GTTCGGCAGCCTCCGCCACGTACCTGGAGGGCCCCGCCCCC < 41bp 0.550347800066939 0.874111678005534 0.2726394 0.6265311 prediction 0.64752775587719 Functional Gain - UCKL1-AS1 ENSG00000198276;ENSG00000196700 upstream;downstream Human other chr20:62588001 chr20:62588002 . . 0 22 hPsi_associated_SNPs_28892 0 0 0 0 0 unknown 0.438718446341999 0.438615696707358 0.2530622 0 hPsi_site_22616 iPseU_CNN:0.2530622;iRNA_PseU:0 22617 chr6 57048933 57048933 1 + C A UCEC 57048932 + 57048912 57048952 41 CCATCAAGCTATTAGAGCATTCTAAAGGAGCTGGTTCCAAA CCATCAAGCTATTAGAGCATTATAAAGGAGCTGGTTCCAAA < 41bp 0.477311080672593 0.823762929414499 0.6263914 0.66955423 prediction 0.647525858828997 Functional Gain - BAG2 ENSG00000112208 CDS Human protein_coding chr6:57048932 chr6:57048933 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_28893 0 0 1 0 0 Ribosome 0.438717360068062 0.43777890128588 0.08632566 0 hPsi_site_22617 iPseU_CNN:0.08632566;iRNA_PseU:0 22618 chr4 25678232 25678232 1 + G A UCEC 25678231 + 25678211 25678251 41 GCTGCCGCTGCAGCAAGTGCTGCGAGGACTTGGAGGAGGCG GCTGCCGCTGCAGCAAGTGCTACGAGGACTTGGAGGAGGCG < 41bp 0.40632669098105 0.823761940394174 0.290466 0.7168496 prediction 0.647523880788349 Functional Gain - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25678231 chr4:25678232 nonsynonymous SNV 0.592 3 22 hPsi_associated_SNPs_28894 0 0 0 0 0 nucleus 0.438697002318101 0.438744034512937 0.4336992 0 hPsi_site_22618 iPseU_CNN:0.4336992;iRNA_PseU:0 22619 chr5 140595695 140595695 1 + C A PAAD 140595694 + 140595674 140595714 41 TGCTCCTGGTGGACGGCTTCTCCCAGCCCTACCTGCCTCTC TGCTCCTGGTGGACGGCTTCTACCAGCCCTACCTGCCTCTC < 41bp 0.482733600292475 0.823759031079152 0.28076345 0.74107456 prediction 0.647518062158304 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595694 chr5:140595695 nonsynonymous SNV 0.976 3 22 hPsi_associated_SNPs_28895 0 0 0 0 0 exosome 0.438718592992719 0.438718594792084 0.48214912 0 hPsi_site_22619 iPseU_CNN:0.48214912;iRNA_PseU:0 22620 chr3 25833159 25833159 1 + G T LIHC 25833158 + 25833138 25833178 41 TACCACAGGAGCTCATGCTGTGGGAGACTCATTTAGATTTA TACCACAGGAGCTCATGCTGTTGGAGACTCATTTAGATTTA < 41bp 0.510286384999768 0.83404076648975 0.6022184 0.7407188 prediction 0.647508762979965 Functional Gain - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833158 chr3:25833159 synonymous SNV . 0 22 hPsi_associated_SNPs_28896 0 0 0 0 1 Ribosome 0.438727105030756 0.438740704265501 0.2770008 0 hPsi_site_22620 iPseU_CNN:0.2770008;iRNA_PseU:0 22621 chrX 78010852 78010852 1 + C A UCEC 78010851 + 78010831 78010871 41 TGCCATTGTGTGTGCTGGTGTCTGGATCCTAGTCCTCAGTG TGCCATTGTGTGTGCTGGTGTATGGATCCTAGTCCTCAGTG < 41bp 0.536156530410651 0.859905594233904 0.1922403 0.3462801 prediction 0.647498127646505 Functional Gain - LPAR4 ENSG00000147145 CDS Human protein_coding chrX:78010851 chrX:78010852 synonymous SNV . 0 22 hPsi_associated_SNPs_28897 0 0 0 0 0 exosome 0.438718208074312 0.43873670407601 0 0 hPsi_site_22621 iPseU_CNN:0;iRNA_PseU:0 22622 chr6 108496093 108496093 1 + G A BLCA 108496092 + 108496072 108496112 41 CCAGTGCAGGGCGTGTCGGCTGAAGAAGTGTTTGGAAGTCA CCAGTGCAGGGCGTGTCGGCTAAAGAAGTGTTTGGAAGTCA < 41bp 0.406554592188074 0.823745651146579 0.31654102 0.72740054 prediction 0.647491302293158 Functional Gain - NR2E1 ENSG00000112333 CDS Human protein_coding chr6:108496092 chr6:108496093 synonymous SNV . 0 22 hPsi_associated_SNPs_28898 0 0 0 0 2 exosome 0.43828717140878 0.438610074337935 0.45480108 0 hPsi_site_22622 iPseU_CNN:0.45480108;iRNA_PseU:0 22623 chr1 77752651 77752651 1 + C A UCEC 77752650 + 77752630 77752670 41 TTTTGAATGGACTGATGTGTTCTAAGCCCGAAGATCCAGTA TTTTGAATGGACTGATGTGTTATAAGCCCGAAGATCCAGTA < 41bp 0.48455732902275 0.823745447686074 0.6744554 0.66159433 prediction 0.647490895372148 Functional Gain - AK5 ENSG00000154027 CDS Human protein_coding chr1:77752650 chr1:77752651 nonsynonymous SNV 0.952 1 22 hPsi_associated_SNPs_28899 0 0 1 0 2 Nucleus 0.438718592995176 0.438715018594973 0 0 hPsi_site_22623 iPseU_CNN:0;iRNA_PseU:0 22624 chr9 130924680 130924680 1 + G A rs114313640 130924679 + 130924659 130924699 41 GTGGGCACAGGCCCAGACCTTGAGTCCTCAGGGACACTGTG GTGGGCACAGGCCCAGACCTTAAGTCCTCAGGGACACTGTG < 41bp 0.558501179458824 0.882245435491388 0.2634628 0.34664434 prediction 0.647488512065128 Functional Gain - C9orf16 ENSG00000171159 intronic Human protein_coding chr9:130924679 chr9:130924680 . . 0 22 hPsi_associated_SNPs_28900 0 0 0 0 0 Cytosol 0.43871859237277 0.438717807721566 0 0 hPsi_site_22624 iPseU_CNN:0;iRNA_PseU:0 22625 chr10 94835682 94835682 1 + G A LAML 94835681 + 94835661 94835701 41 TACCTGGGGCTCTACCCACATGTTCTCCAGAAAGTGCGAGA TACCTGGGGCTCTACCCACATATTCTCCAGAAAGTGCGAGA < 41bp 0.397004876895799 0.82374281542516 0.22243759 0.45041746 prediction 0.647485630850321 Functional Gain - CYP26A1 ENSG00000095596 CDS Human protein_coding chr10:94835681 chr10:94835682 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_28901 0 0 0 0 2 Endoplasmic reticulum 0.438718593001061 0.438718592995716 0 0 hPsi_site_22625 iPseU_CNN:0;iRNA_PseU:0 22626 chr7 100459398 100459398 1 + C A BRCA 100459397 + 100459377 100459417 41 CGGCTGGACGTCCGGAAGGATCACGTGAAGTTCTGGCGGCC CGGCTGGACGTCCGGAAGGATAACGTGAAGTTCTGGCGGCC < 41bp 0.464851030907546 0.823742359889151 0.32280895 0.5328456 prediction 0.647484719778302 Functional Gain - SLC12A9 ENSG00000146828 CDS Human protein_coding chr7:100459397 chr7:100459398 nonsynonymous SNV 0.987 5 22 hPsi_associated_SNPs_28902 0 0 1 0 1 Cytosol 0.438718977274888 0.438710680723566 0.0656912000000001 0 hPsi_site_22626 iPseU_CNN:0.0656912000000001;iRNA_PseU:0 22627 chr16 72058481 72058481 1 + G A rs180755493 72058480 + 72058460 72058500 41 CCATCCAGGCCTCTGCTATCTGCATCTGCAGTGGGCTTCCC CCATCCAGGCCTCTGCTATCTACATCTGCAGTGGGCTTCCC < 41bp 0.447844249511384 0.823741990912277 0.29279792 0.45153275 prediction 0.647483981824555 Functional Gain - DHODH ENSG00000102967 UTR3 Human protein_coding chr16:72058480 chr16:72058481 . . 0 22 hPsi_associated_SNPs_28903 0 0 0 0 0 Endoplasmic reticulum 0.438650134110121 0.438718584015193 0 0 hPsi_site_22627 iPseU_CNN:0;iRNA_PseU:0 22628 chr2 113765541 113765541 1 + G A SKCM 113765540 + 113765520 113765560 41 TGGTTCATCGCTGTCAGCTCTGAAGGAGGCTGTCCTCTCAT TGGTTCATCGCTGTCAGCTCTAAAGGAGGCTGTCCTCTCAT < 41bp 0.420906729908035 0.823741001764014 0.3126042 0.7052544 prediction 0.647482003528027 Functional Gain - IL36A ENSG00000136694 CDS Human protein_coding chr2:113765540 chr2:113765541 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_28904 0 0 0 0 0 exosome 0.438705903946249 0.438733607118342 0.4105088 0 hPsi_site_22628 iPseU_CNN:0.4105088;iRNA_PseU:0 22629 chr11 55944547 55944547 1 + G A SKCM 55944546 + 55944526 55944566 41 GTCACAGGATCATGGATAGGTGGAATAGTTAACACATTAAT GTCACAGGATCATGGATAGGTAGAATAGTTAACACATTAAT < 41bp 0.558596260148068 0.882334344674705 0.45887145 0.6760557 prediction 0.647476169053274 Functional Gain - OR5J2 ENSG00000174957 CDS Human protein_coding chr11:55944546 chr11:55944547 nonsynonymous SNV 0.001 4 22 hPsi_associated_SNPs_28905 0 0 0 0 0 unknown 0.438718592998399 0.438718594883507 0.3521114 0 hPsi_site_22629 iPseU_CNN:0.3521114;iRNA_PseU:0 22630 chr6 122743424 122743424 1 + G A STAD 122743423 + 122743403 122743443 41 ATTCCAGAAACTAATGAGGATGTTATATCTGATCCCTCCAA ATTCCAGAAACTAATGAGGATATTATATCTGATCCCTCCAA < 41bp 0.430610430683742 0.823737942690973 0.27326217 0.26622832 prediction 0.647475885381946 Functional Gain - HSF2 ENSG00000025156 CDS Human protein_coding chr6:122743423 chr6:122743424 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28906 0 0 1 0 1 Cytosol 0.438716992057068 0.438717950891939 0 0 hPsi_site_22630 iPseU_CNN:0;iRNA_PseU:0 22631 chr1 174417609 174417609 1 + C T LUAD 174417610 - 174417590 174417630 41 AACACTTTTTAGAACTGAGATGATATATCCAAAAACCTGGC AACACTTTTTAGAACTGAGATAATATATCCAAAAACCTGGC < 41bp 0.552443518963886 0.876179064548663 0.16723874 0.1971677 prediction 0.647471091169555 Functional Gain - GPR52 ENSG00000203737 CDS Human protein_coding chr1:174417610 chr1:174417609 synonymous SNV . 0 22 hPsi_associated_SNPs_28907 0 0 0 0 0 exosome 0.438745098286542 0.438646904682273 0 0 hPsi_site_22631 iPseU_CNN:0;iRNA_PseU:0 22632 chr16 70180074 70180074 1 + G T GBM 70180073 + 70180053 70180093 41 CCCTCGAGCTGTGGATGTGCTGTCTGAGTTGTCCTATGCCC CCCTCGAGCTGTGGATGTGCTTTCTGAGTTGTCCTATGCCC < 41bp 0.521551186839772 0.845285312087343 0.316131 0.4738723 prediction 0.647468250495141 Functional Gain - PDPR ENSG00000090857 CDS Human protein_coding chr16:70180073 chr16:70180074 synonymous SNV . 0 22 hPsi_associated_SNPs_28908 0 0 0 0 2 Nucleus 0.438716161375504 0.438718888519547 0 0 hPsi_site_22632 iPseU_CNN:0;iRNA_PseU:0 22633 chr1 45278683 45278683 1 + G A LIHC 45278682 + 45278662 45278702 41 TCGCAGGTGGCCGTAACCTTTGGCCTGGGGCAGCTGCAGGA TCGCAGGTGGCCGTAACCTTTAGCCTGGGGCAGCTGCAGGA < 41bp 0.405175627753608 0.823728659480017 0.27431023 0.5997295 prediction 0.647457318960034 Functional Gain - BTBD19 ENSG00000222009 CDS Human protein_coding chr1:45278682 chr1:45278683 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_28909 0 0 1 0 2 chromatin 0.438800185567188 0.43871860077968 0.199459 0 hPsi_site_22633 iPseU_CNN:0.199459;iRNA_PseU:0 22634 chr3 5025163 5025163 1 + G A STAD 5025162 + 5025142 5025182 41 ACCTGCCCATGCTGGAGAAGTGCTGGTATCCCACCTCAGTG ACCTGCCCATGCTGGAGAAGTACTGGTATCCCACCTCAGTG < 41bp 0.404917379845988 0.823727824154299 0.25392902 0.4818214 prediction 0.647455648308599 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025162 chr3:5025163 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28910 0 0 1 0 0 chromatin 0.43877905256688 0.438444397768469 0 0 hPsi_site_22634 iPseU_CNN:0;iRNA_PseU:0 22635 chr1 41285646 41285646 1 + G A STAD 41285645 + 41285625 41285665 41 TTACTGGGCATCTCTTTCTTTGCCCTGCCTGCCGTGAGTTG TTACTGGGCATCTCTTTCTTTACCCTGCCTGCCGTGAGTTG < 41bp 0.407138811664508 0.823726901914272 0.34256887 0.49359426 prediction 0.647453803828545 Functional Gain - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41285645 chr1:41285646 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_28911 0 0 0 0 2 chromatin 0.438718567987182 0.438714967489834 0 0 hPsi_site_22635 iPseU_CNN:0;iRNA_PseU:0 22636 chr20 60733759 60733759 1 + G A PRAD 60733758 + 60733738 60733778 41 AGAACCACCACCTGATCCAGTGCATCCTGGAGTACCAGAGC AGAACCACCACCTGATCCAGTACATCCTGGAGTACCAGAGC < 41bp 0.585846201943269 0.909569582167654 0.23351777 0.33845833 prediction 0.647446760448771 Functional Gain - SS18L1 ENSG00000184402 CDS Human protein_coding chr20:60733758 chr20:60733759 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_28912 0 0 1 0 2 chromatin 0.438714544689753 0.438760083688101 0 0 hPsi_site_22636 iPseU_CNN:0;iRNA_PseU:0 22637 chrX 65238772 65238772 1 + G A LUSC 65238771 + 65238751 65238791 41 GCTGAGTTGGACACTCCATGTGGTAGAGTGTCAGTTTGTCA GCTGAGTTGGACACTCCATGTAGTAGAGTGTCAGTTTGTCA < 41bp 0.566454060955493 0.890172845935589 0.23239112 0.4058535 prediction 0.647437569960192 Functional Gain - MIR223 ENSG00000207939 ncRNA_exonic Human other chrX:65238771 chrX:65238772 . . 0 22 hPsi_associated_SNPs_28913 0 0 1 0 0 unknown 0.438144352704083 0.438169949150859 0 0 hPsi_site_22637 iPseU_CNN:0;iRNA_PseU:0 22638 chr15 69689852 69689852 1 + C A UCEC 69689851 + 69689831 69689871 41 ACTCTGTAAGGTGATTCGTGTCCTCGCCTTTGCTTATCCGT ACTCTGTAAGGTGATTCGTGTACTCGCCTTTGCTTATCCGT < 41bp 0.451670864063061 0.823716278042916 0.3421528 0.8735396 prediction 0.647432556085831 Functional Gain - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69689851 chr15:69689852 synonymous SNV . 0 22 hPsi_associated_SNPs_28914 0 0 1 0 1 Cytosol 0.438717291695588 0.438729782568203 0.7470792 0 hPsi_site_22638 iPseU_CNN:0.7470792;iRNA_PseU:0 22639 chr20 1218806 1218806 1 + C A UCEC 1218805 + 1218785 1218825 41 CACTGGAGAACGATCTCTATTCTATGACAGTGGAGATGGGT CACTGGAGAACGATCTCTATTATATGACAGTGGAGATGGGT < 41bp 0.462782984175708 0.823705543183058 0.3239708 0.40568858 prediction 0.647411086366116 Functional Gain - RAD21L1 ENSG00000244588 CDS Human protein_coding chr20:1218805 chr20:1218806 nonsynonymous SNV 0.898 0 22 hPsi_associated_SNPs_28915 0 0 0 0 1 chromatin 0.438718568439419 0.438719442894772 0 0 hPsi_site_22639 iPseU_CNN:0;iRNA_PseU:0 22640 chr5 175772304 175772304 1 + C A LIHC 175772303 + 175772283 175772323 41 AGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTGATCCAGA AGAGAAGCAGATTGAGGCCTTACGCAGCCGCCTGATCCAGA < 41bp 0.545618210231176 0.869323394239969 0.27665585 0.73995614 prediction 0.647410368017585 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772303 chr5:175772304 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28916 0 0 1 0 0 chromatin 0.438718591862308 0.43871850737453 0.47991228 0 hPsi_site_22640 iPseU_CNN:0.47991228;iRNA_PseU:0 22641 chr7 2753191 2753191 1 + G A rs116079024 2753190 + 2753170 2753210 41 GGGGCACACAGGCTCCACACTGCCACCCAGCTTCCAAGGCT GGGGCACACAGGCTCCACACTACCACCCAGCTTCCAAGGCT < 41bp 0.420073578810162 0.823701750514809 0.36575878 0.6603878 prediction 0.647403501029619 Functional Gain - AMZ1 ENSG00000174945 UTR3 Human protein_coding chr7:2753190 chr7:2753191 . . 0 22 hPsi_associated_SNPs_28917 0 0 0 0 0 nucleus 0.438718592995254 0.438718593010041 0.3207756 0 hPsi_site_22641 iPseU_CNN:0.3207756;iRNA_PseU:0 22642 chr11 59245544 59245544 1 + C A COAD 59245543 + 59245523 59245563 41 CACACTGTGGTTTTTCCTGCTCCTGGTGTCCTACATAGTCA CACACTGTGGTTTTTCCTGCTACTGGTGTCCTACATAGTCA < 41bp 0.470966152203184 0.823690158561825 0.2099024 0.2816446 prediction 0.64738031712365 Functional Gain - OR4D10 ENSG00000254466 CDS Human protein_coding chr11:59245543 chr11:59245544 synonymous SNV . 0 22 hPsi_associated_SNPs_28918 0 0 0 0 0 unknown 0.438229640026026 0.438724858091475 0 0 hPsi_site_22642 iPseU_CNN:0;iRNA_PseU:0 22643 chr9 129642680 129642680 1 + G A BLCA 129642679 + 129642659 129642699 41 GCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCC GCGGGCTTTGTCTGTCCACCTACACAGTGACCTGCAGGGCC < 41bp 0.412345158611879 0.823689603293043 0.2675491 0.3327756 prediction 0.647379206586086 Functional Gain - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642679 chr9:129642680 synonymous SNV . 0 22 hPsi_associated_SNPs_28919 0 0 1 0 0 nucleoplasm 0.438718738748772 0.4387185898095 0 0 hPsi_site_22643 iPseU_CNN:0;iRNA_PseU:0 22644 chr2 95847304 95847304 1 + C A STAD 95847303 + 95847283 95847323 41 AAGCCTTCTTTGACCGTTCGTCCCTAACTGTCCATCAGCGA AAGCCTTCTTTGACCGTTCGTACCTAACTGTCCATCAGCGA < 41bp 0.449943475277522 0.823689039491765 0.2004498 0.61219543 prediction 0.64737807898353 Functional Gain - ZNF2 ENSG00000163067 CDS Human other chr2:95847303 chr2:95847304 nonsynonymous SNV 0.255 2 22 hPsi_associated_SNPs_28920 0 0 1 0 0 chromatin 0.438737345602129 0.438762668860473 0.22439086 0 hPsi_site_22644 iPseU_CNN:0.22439086;iRNA_PseU:0 22645 chr1 101704890 101704890 1 + G A UCEC 101704889 + 101704869 101704909 41 ACAAGCTCACTCCCGCCCAGTGGTTTCTGCGGGAAGGGAGT ACAAGCTCACTCCCGCCCAGTAGTTTCTGCGGGAAGGGAGT < 41bp 0.407315614999634 0.823681766213776 0.12986818 0.18680575 prediction 0.647363532427553 Functional Gain - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101704889 chr1:101704890 stopgain 0.990 1 22 hPsi_associated_SNPs_28921 0 0 0 0 0 Endoplasmic reticulum 0.438719594638229 0.438718592590467 0 0 hPsi_site_22645 iPseU_CNN:0;iRNA_PseU:0 22646 chr7 65419221 65419221 1 + C A UCEC 65419220 + 65419200 65419240 41 GAACTTCCTTCTTCTCATTATCAACTACAAACGACTAGTTT GAACTTCCTTCTTCTCATTATAAACTACAAACGACTAGTTT < 41bp 0.530620333630983 0.854299891667277 0.39455098 0.5421178 prediction 0.647359116072589 Functional Gain - VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419220 chr7:65419221 nonsynonymous SNV 0.866 3 22 hPsi_associated_SNPs_28922 0 0 1 0 0 Endoplasmic reticulum 0.438718431378014 0.43871799314225 0.0842356 0 hPsi_site_22646 iPseU_CNN:0.0842356;iRNA_PseU:0 22647 chr21 46020560 46020560 1 + G A BLCA 46020559 + 46020539 46020579 41 GTCTGTCTGCTCCAGCGACCTGAGCTACGGCAGCCGCGTCT GTCTGTCTGCTCCAGCGACCTAAGCTACGGCAGCCGCGTCT < 41bp 0.439501998174136 0.823677974925053 0.21387017 0.33397835 prediction 0.647355949850105 Functional Gain - KRTAP10-7 ENSG00000205441 CDS Human other chr21:46020559 chr21:46020560 synonymous SNV . 0 22 hPsi_associated_SNPs_28923 0 0 0 0 0 unknown 0.437969253053635 0.438369176994473 0 0 hPsi_site_22647 iPseU_CNN:0;iRNA_PseU:0 22648 chr14 105926761 105926761 1 + G T KIRC 105926760 + 105926740 105926780 41 CCGACAGCCCAGCCTGCACATGAGCGCCGCAGCTGCCTCCC CCGACAGCCCAGCCTGCACATTAGCGCCGCAGCTGCCTCCC < 41bp 0.489867659909529 0.823675130692765 0.2283003 0.46244445 prediction 0.64735026138553 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105926760 chr14:105926761 nonsynonymous SNV 0.959 2 22 hPsi_associated_SNPs_28924 0 0 1 0 2 Cytosol 0.439085915914797 0.438718604253108 0 0 hPsi_site_22648 iPseU_CNN:0;iRNA_PseU:0 22649 chrX 120181873 120181873 1 + G A SKCM 120181872 + 120181852 120181892 41 TCCTGCGGATCATCAAGCCCTGCAACCATGTGCTGAGTCTC TCCTGCGGATCATCAAGCCCTACAACCATGTGCTGAGTCTC < 41bp 0.572098104702853 0.895771912878083 0.2572075 0.3802796 prediction 0.647347616350461 Functional Gain - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120181872 chrX:120181873 nonsynonymous SNV 0.930 5 22 hPsi_associated_SNPs_28925 0 0 0 0 0 Ribosome 0.438718592995105 0.438718592994476 0 0 hPsi_site_22649 iPseU_CNN:0;iRNA_PseU:0 22650 chr16 5127503 5127503 1 + G A LIHC 5127502 + 5127482 5127522 41 CCTGTGTGTTACCAATGCTATGCGAGAAGACCTGGCGGATA CCTGTGTGTTACCAATGCTATACGAGAAGACCTGGCGGATA < 41bp 0.393950563601489 0.823671474567819 0.38870767 0.7183305 prediction 0.647342949135639 Functional Gain - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127502 chr16:5127503 nonsynonymous SNV 0.900 5 22 hPsi_associated_SNPs_28926 0 0 1 0 2 Ribosome 0.438726586320227 0.438751455681849 0.436661 0 hPsi_site_22650 iPseU_CNN:0.436661;iRNA_PseU:0 22651 chr19 15852955 15852955 1 + C A COAD 15852954 + 15852934 15852974 41 ATCCCACCTCACTGTGGTGGTCATGCACTATAGTTTTGCCT ATCCCACCTCACTGTGGTGGTAATGCACTATAGTTTTGCCT < 41bp 0.478385410976315 0.823665968562379 0.20680183 0.6056244 prediction 0.647331937124758 Functional Gain - OR10H3 ENSG00000171936 CDS Human protein_coding chr19:15852954 chr19:15852955 synonymous SNV . 0 22 hPsi_associated_SNPs_28927 0 0 0 0 0 unknown 0.43871265956996 0.438718556827462 0.2112488 0 hPsi_site_22651 iPseU_CNN:0.2112488;iRNA_PseU:0 22652 chr11 55340368 55340368 1 + G A LUAD 55340367 + 55340347 55340387 41 CTTTGGACCTTGCATATTTATGTACACATGCCTTGCAACCG CTTTGGACCTTGCATATTTATATACACATGCCTTGCAACCG < 41bp 0.443121249119979 0.823664530142034 0.40846556 0.6604562 prediction 0.647329060284068 Functional Gain - OR4C16 ENSG00000181935 CDS Human other chr11:55340367 chr11:55340368 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_28928 0 0 0 0 0 unknown 0.438705280200888 0.438722763271259 0.3209124 0 hPsi_site_22652 iPseU_CNN:0.3209124;iRNA_PseU:0 22653 chr9 131296145 131296145 1 + C A UCEC 131296144 + 131296124 131296164 41 CCCAGAGTGGGGGACCTCATTCTTGCTCATCTACATAAGAA CCCAGAGTGGGGGACCTCATTATTGCTCATCTACATAAGAA < 41bp 0.547721707471001 0.871384866220008 0.30195105 0.5390394 prediction 0.647326317498013 Functional Gain - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131296144 chr9:131296145 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28929 0 0 1 0 1 Cytosol 0.43871859299557 0.43871858976934 0.0780787999999999 0 hPsi_site_22653 iPseU_CNN:0.0780787999999999;iRNA_PseU:0 22654 chr7 2473057 2473057 1 + G A SKCM 2473056 + 2473036 2473076 41 CTTCCGCAGCAAGTTCGAGCTGGAGAACGAGGAGTTCTACC CTTCCGCAGCAAGTTCGAGCTAGAGAACGAGGAGTTCTACC < 41bp 0.574266604049092 0.897926254581357 0.2661671 0.31291875 prediction 0.647319301064531 Functional Gain - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473056 chr7:2473057 synonymous SNV . 0 22 hPsi_associated_SNPs_28930 0 0 1 0 0 nucleolus 0.438718596195803 0.438716797267744 0 0 hPsi_site_22654 iPseU_CNN:0;iRNA_PseU:0 22655 chr11 193146 193146 1 + G A BRCA 193145 + 193125 193165 41 TGGTGGCCCTCACCCTGTTCTGCATCTGCCGTGAGTCTGTG TGGTGGCCCTCACCCTGTTCTACATCTGCCGTGAGTCTGTG < 41bp 0.576244375618758 0.899900580010089 0.32873553 0.46450984 prediction 0.647312408782662 Functional Gain - SCGB1C1;SCGB1C2 ENSG00000188076 CDS Human protein_coding chr11:193145 chr11:193146 nonsynonymous SNV 0.156 1 22 hPsi_associated_SNPs_28931 0 0 0 0 1 unknown 0.438713553279963 0.438718482983703 0 0 hPsi_site_22655 iPseU_CNN:0;iRNA_PseU:0 22656 chrX 135290063 135290063 1 + C A UCEC 135290062 + 135290042 135290082 41 CTTCCCTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATG CTTCCCTAAAGGGGAGGACTTATACTGCGTGACTTGCCATG < 41bp 0.476596038984431 0.823655270625078 0.30821484 0.38275898 prediction 0.647310541250157 Functional Gain - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135290062 chrX:135290063 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28932 0 0 1 0 1 chromatin 0.438712943821692 0.43871699209852 0 0 hPsi_site_22656 iPseU_CNN:0;iRNA_PseU:0 22657 chr15 45848766 45848766 1 + C A UCEC 45848765 + 45848745 45848785 41 CAGAGCATCAGATGAAGACTTCATTGGGTTTTACAGTGGCT CAGAGCATCAGATGAAGACTTAATTGGGTTTTACAGTGGCT < 41bp 0.480195655766365 0.823654874928849 0.30160433 0.37067664 prediction 0.647309749857698 Functional Gain - HMGN2P46 ENSG00000179362 ncRNA_exonic Human transcribed_processed_pseudogene chr15:45848765 chr15:45848766 . . 0 22 hPsi_associated_SNPs_28933 0 0 1 0 0 unknown 0.439926976512898 0.439166662594498 0 0 hPsi_site_22657 iPseU_CNN:0;iRNA_PseU:0 22658 chr19 4157275 4157275 1 + C A UCEC 4157274 + 4157254 4157294 41 TGATCCAAGTACCTGAAGCCTCTGTGACCATAGACCTGGGT TGATCCAAGTACCTGAAGCCTATGTGACCATAGACCTGGGT < 41bp 0.453258467489949 0.823652381198561 0.24821773 0.27474272 prediction 0.647304762397122 Functional Gain - CREB3L3 ENSG00000060566 CDS Human protein_coding chr19:4157274 chr19:4157275 nonsynonymous SNV 0.938 3 22 hPsi_associated_SNPs_28934 0 0 1 0 1 exosome 0.438716357387682 0.438718380880213 0 0 hPsi_site_22658 iPseU_CNN:0;iRNA_PseU:0 22659 chr6 7585530 7585530 1 + G A COAD 7585529 + 7585509 7585549 41 CAGGACGCAGTCTCCCAGGGTGTGATTGACCAAGACATGGC CAGGACGCAGTCTCCCAGGGTATGATTGACCAAGACATGGC < 41bp 0.415246776886704 0.823644188282606 0.25413847 0.41068223 prediction 0.647288376565213 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7585529 chr6:7585530 nonsynonymous SNV 0.735 2 22 hPsi_associated_SNPs_28935 0 0 1 0 0 Nucleus 0.438712830365027 0.438740626168037 0 0 hPsi_site_22659 iPseU_CNN:0;iRNA_PseU:0 22660 chr11 55563127 55563127 1 + G A HNSC 55563126 + 55563106 55563146 41 TCAGATTCCTCTCTTCCTTGTGTTTCTGCTCATGTATGTTA TCAGATTCCTCTCTTCCTTGTATTTCTGCTCATGTATGTTA < 41bp 0.446317256771235 0.823635539909882 0.23673218 0.55866456 prediction 0.647271079819763 Functional Gain - OR5D14 ENSG00000186113 CDS Human protein_coding chr11:55563126 chr11:55563127 synonymous SNV . 0 22 hPsi_associated_SNPs_28936 0 0 0 0 0 unknown 0.438998280498724 0.438752611829967 0.11732912 0 hPsi_site_22660 iPseU_CNN:0.11732912;iRNA_PseU:0 22661 chr14 22180562 22180562 1 + G A UCEC 22180561 + 22180541 22180581 41 CTGCATTTTGGCCATGGCTTTGCAGAGCACTCTGGGGGCGG CTGCATTTTGGCCATGGCTTTACAGAGCACTCTGGGGGCGG < 41bp 0.523062174481199 0.846694316154914 0.26041824 0.7772211 prediction 0.647264283347432 Functional Gain - OR4E1;LINC02332 ENSG00000211776 CDS Human TR_V_gene chr14:22180561 chr14:22180562 synonymous SNV . 0 22 hPsi_associated_SNPs_28937 0 0 0 0 0 unknown 0.43860415188795 0.438731968913036 0.5544422 0 hPsi_site_22661 iPseU_CNN:0.5544422;iRNA_PseU:0 22662 chr5 112917321 112917321 1 + C A BLCA 112917320 + 112917300 112917340 41 CCTATGTCTTCAGAAGAGCTTCCTTTGGCCTCATCTTGGAG CCTATGTCTTCAGAAGAGCTTACTTTGGCCTCATCTTGGAG < 41bp 0.464242559570253 0.823631408330493 0.4731645 0.60991025 prediction 0.647262816660986 Functional Gain - YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112917320 chr5:112917321 nonsynonymous SNV 0.972 1 22 hPsi_associated_SNPs_28938 0 0 1 0 1 Cytosol 0.438718593240674 0.43871656101011 0.2198205 0 hPsi_site_22662 iPseU_CNN:0.2198205;iRNA_PseU:0 22663 chr7 128582186 128582186 1 + G A BLCA 128582185 + 128582165 128582205 41 CCCACCCCGCCGCGTGCGGCTGAAGCCCTGGCTGGTGGCCC CCCACCCCGCCGCGTGCGGCTAAAGCCCTGGCTGGTGGCCC < 41bp 0.57491555692659 0.898544199147021 0.34650433 0.67749894 prediction 0.647257284440861 Functional Gain - IRF5 ENSG00000128604 CDS Human protein_coding chr7:128582185 chr7:128582186 synonymous SNV . 0 22 hPsi_associated_SNPs_28939 0 0 0 0 0 exosome 0.438718570882152 0.438718756172852 0.35499788 0 hPsi_site_22663 iPseU_CNN:0.35499788;iRNA_PseU:0 22664 chr14 78325478 78325478 1 + C A HNSC 78325477 + 78325457 78325497 41 CTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCACC CTGTGCCAACCGGGGCACCTTAATCAAGGTGGGCCAGCACC < 41bp 0.527473372663116 0.851101658060029 0.27484435 0.37109733 prediction 0.647256570793827 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78325477 chr14:78325478 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28940 0 0 0 2 1 chromatin 0.438719379729305 0.438457482652106 0 0 hPsi_site_22664 iPseU_CNN:0;iRNA_PseU:0 22665 chr10 103921943 103921943 1 + G A OV 103921942 + 103921922 103921962 41 AAAGGCAAGTCCTTTCGGCATGAGAAAACCAAGAAGAAGCG AAAGGCAAGTCCTTTCGGCATAAGAAAACCAAGAAGAAGCG < 41bp 0.423279955826207 0.823626721382244 0.15540633 0.24032265 prediction 0.647253442764489 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103921942 chr10:103921943 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_28941 0 0 1 0 1 Nucleus 0.438718592995071 0.438718592982634 0 0 hPsi_site_22665 iPseU_CNN:0;iRNA_PseU:0 22666 chr6 107088308 107088308 1 + C A UCEC 107088307 + 107088287 107088327 41 CTTATCAAGAAGACCAAGTTTCTAAATGCCTACATTACTGT CTTATCAAGAAGACCAAGTTTATAAATGCCTACATTACTGT < 41bp 0.46837094621234 0.823622831247774 0.32575616 0.3239314 prediction 0.647245662495548 Functional Gain - QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107088307 chr6:107088308 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_28942 0 0 0 0 2 Ribosome 0.438194920539544 0.438951741611048 0 0 hPsi_site_22666 iPseU_CNN:0;iRNA_PseU:0 22667 chr2 1488512 1488512 1 + G A rs28910612 1488511 + 1488491 1488531 41 GCCGCCTTCCGCTTCGGCCATGCCACGATCCACCCGCTGGT GCCGCCTTCCGCTTCGGCCATACCACGATCCACCCGCTGGT < 41bp 0.399910069222314 0.823621020623853 0.22176439 0.354526 prediction 0.647242041247706 Functional Gain - TPO ENSG00000115705 CDS Human protein_coding chr2:1488511 chr2:1488512 nonsynonymous SNV 0.018 3 22 hPsi_associated_SNPs_28943 0 0 0 0 0 exosome 0.438525965858292 0.438465771670124 0 0 hPsi_site_22667 iPseU_CNN:0;iRNA_PseU:0 22668 chr20 44511598 44511598 1 + G A LUSC 44511597 + 44511577 44511617 41 ATCCCTGCCAAGGAGGACACTGAAGGCCTGGCCCAGATGTT ATCCCTGCCAAGGAGGACACTAAAGGCCTGGCCCAGATGTT < 41bp 0.403183342111686 0.823608198665647 0.2884727 0.3459826 prediction 0.647216397331294 Functional Gain - ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44511597 chr20:44511598 nonsynonymous SNV 0.956 0 22 hPsi_associated_SNPs_28944 0 0 1 0 0 nucleus 0.438718616033129 0.438718592996036 0 0 hPsi_site_22668 iPseU_CNN:0;iRNA_PseU:0 22669 chr8 19675794 19675794 1 + G A LGG 19675793 + 19675773 19675813 41 ATGTGTGTTGCAGTATGAGATGTACACCATCGAGCGGAATG ATGTGTGTTGCAGTATGAGATATACACCATCGAGCGGAATG < 41bp 0.575942486330412 0.8995489535856 0.5708513 0.754611 prediction 0.647212934510376 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19675793 chr8:19675794 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28945 0 0 1 0 2 Cytosol 0.424409719768504 0.431858354640506 0.3675194 0 hPsi_site_22669 iPseU_CNN:0.3675194;iRNA_PseU:0 22670 chr20 36431392 36431392 1 + C A UCEC 36431391 + 36431371 36431411 41 CTTACGAACCATCTTTCCCCTCTTTATGAAATCTCCCAGGA CTTACGAACCATCTTTCCCCTATTTATGAAATCTCCCAGGA < 41bp 0.454893911523068 0.823603263599541 0.30587646 0.37989548 prediction 0.647206527199083 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36431391 chr20:36431392 synonymous SNV . 0 22 hPsi_associated_SNPs_28946 0 0 0 0 1 Cytosol 0.438718592323723 0.438718590414719 0 0 hPsi_site_22670 iPseU_CNN:0;iRNA_PseU:0 22671 chr7 143701593 143701593 1 + C A UCEC 143701592 + 143701572 143701612 41 CTTCATCTCCTGCCTCAGCTTCTGTGGTCCCAATGTCATCA CTTCATCTCCTGCCTCAGCTTATGTGGTCCCAATGTCATCA < 41bp 0.529652852986961 0.853254593905215 0.540542 0.6233584 prediction 0.64720348183651 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701592 chr7:143701593 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_28947 0 0 0 0 0 unknown 0.438718337380263 0.438706459953951 0.1656328 0 hPsi_site_22671 iPseU_CNN:0.1656328;iRNA_PseU:0 22672 chr15 75639701 75639701 1 + G A rs148850630 75639700 + 75639680 75639720 41 CGACCCTGTCCCACGCTAGCTGGGTGACTTCCCCCAACCGC CGACCCTGTCCCACGCTAGCTAGGTGACTTCCCCCAACCGC < 41bp 0.548148673735157 0.871748392602618 0.24113208 0.74027205 prediction 0.647199437734922 Functional Gain - NEIL1 ENSG00000140398 UTR5 Human protein_coding chr15:75639700 chr15:75639701 . . 0 22 hPsi_associated_SNPs_28948 0 0 0 0 0 chromatin 0.438748180863033 0.438718574631715 0.4805441 0 hPsi_site_22672 iPseU_CNN:0.4805441;iRNA_PseU:0 22673 chr4 183959078 183959078 1 + G A SKCM 183959077 + 183959057 183959097 41 CAAAGTGGACCGAGGATGAATGAAATCAACTCATATGCCGC CAAAGTGGACCGAGGATGAATAAAATCAACTCATATGCCGC < 41bp 0.484214232139314 0.823596269970077 0.40109754 0.5252796 prediction 0.647192539940154 Functional Gain - FAM92A1P2 ENSG00000230219 ncRNA_exonic Human transcribed_processed_pseudogene chr4:183959077 chr4:183959078 . . 0 22 hPsi_associated_SNPs_28949 0 0 0 0 0 unknown 0.438766802163165 0.43915366629714 0.0505591999999999 0 hPsi_site_22673 iPseU_CNN:0.0505591999999999;iRNA_PseU:0 22674 chr19 30312684 30312684 1 + C A OV 30312683 + 30312663 30312703 41 ATGTGACAGATGGAGCTTGTTCAGGAGATGAAATTCTCACC ATGTGACAGATGGAGCTTGTTAAGGAGATGAAATTCTCACC < 41bp 0.465355873134484 0.823596039905737 0.21962237 0.31843573 prediction 0.647192079811474 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30312683 chr19:30312684 stopgain 0.995 1 22 hPsi_associated_SNPs_28950 0 0 1 0 2 Ribosome 0.438687189850157 0.438383622860839 0 0 hPsi_site_22674 iPseU_CNN:0;iRNA_PseU:0 22675 chr2 132160519 132160519 1 + G A rs553110739 132160518 + 132160498 132160538 41 TAAAGATGGGAGGTGGCCTTTGCCGCTTTCCATCTTCTCAC TAAAGATGGGAGGTGGCCTTTACCGCTTTCCATCTTCTCAC < 41bp 0.472190166860428 0.823586827149302 0.23498783 0.4806991 prediction 0.647173654298605 Functional Gain - LINC01120 ENSG00000223631 ncRNA_exonic Human lincRNA chr2:132160518 chr2:132160519 . . 0 22 hPsi_associated_SNPs_28951 0 0 0 0 0 unknown 0.438718121529663 0.438718326734742 0 0 hPsi_site_22675 iPseU_CNN:0;iRNA_PseU:0 22676 chr3 126133021 126133021 1 + C A LUSC 126133020 + 126133000 126133040 41 AGGAGCGGAATAAGGCTCTCTCCGTGAGTATCCAGGACAGA AGGAGCGGAATAAGGCTCTCTACGTGAGTATCCAGGACAGA < 41bp 0.446919024919972 0.823584290943647 0.26137656 0.8987261 prediction 0.647168581887294 Functional Gain - CFAP100 ENSG00000163885 CDS Human protein_coding chr3:126133020 chr3:126133021 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_28952 0 0 0 0 2 nucleus 0.438756700644117 0.438717942963997 0.7974522 0 hPsi_site_22676 iPseU_CNN:0.7974522;iRNA_PseU:0 22677 chr19 48342762 48342762 1 + G A LUSC 48342761 + 48342741 48342781 41 AGATTCCTACAGTCCCCCTCTGCCCGGCCCCTCAGGCTCCC AGATTCCTACAGTCCCCCTCTACCCGGCCCCTCAGGCTCCC < 41bp 0.582345720396939 0.905925118299573 0.1922676 0.37562972 prediction 0.647158795805269 Functional Gain - CRX ENSG00000105392 CDS Human protein_coding chr19:48342761 chr19:48342762 synonymous SNV . 0 22 hPsi_associated_SNPs_28953 0 0 0 0 0 Nucleus 0.438718606998776 0.438718597318172 0 0 hPsi_site_22677 iPseU_CNN:0;iRNA_PseU:0 22678 chr2 239007260 239007260 1 + G A rs368304491 239007259 + 239007239 239007279 41 CCCACATAGGACCGCCCACATGGGACCGCCCACATGGGACC CCCACATAGGACCGCCCACATAGGACCGCCCACATGGGACC < 41bp 0.44673826187995 0.82357631466566 0.14766821 0.19898742 prediction 0.647152629331319 Functional Gain - UBE2F-SCLY ENSG00000132330;ENSG00000258984 UTR3 Human other chr2:239007259 chr2:239007260 . . 0 22 hPsi_associated_SNPs_28954 0 0 0 0 0 exosome 0.438718577189877 0.43871859174954 0 0 hPsi_site_22678 iPseU_CNN:0;iRNA_PseU:0 22679 chr12 49743369 49743369 1 + G A STAD 49743368 + 49743348 49743388 41 CATGGAGTTTGTCCTCCTTCTGCCTTACCGGATCTGGAGGC CATGGAGTTTGTCCTCCTTCTACCTTACCGGATCTGGAGGC < 41bp 0.403773536553292 0.823576125853169 0.2554195 0.4387315 prediction 0.647152251706338 Functional Gain - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49743368 chr12:49743369 synonymous SNV . 0 22 hPsi_associated_SNPs_28955 0 0 1 0 0 Ribosome 0.438718592995101 0.438718592995102 0 0 hPsi_site_22679 iPseU_CNN:0;iRNA_PseU:0 22680 chr16 31201386 31201386 1 + C A LUSC 31201385 + 31201365 31201405 41 AGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTC AGAATTCTCCGGAAATCCTATAAAGGTCTCATTTGCTACTC < 41bp 0.545767280145686 0.869342351465693 0.34041166 0.4424178 prediction 0.647150142640014 Functional Gain - FUS ENSG00000089280 CDS Human protein_coding chr16:31201385 chr16:31201386 synonymous SNV . 0 22 hPsi_associated_SNPs_28956 0 0 1 0 2 Cytosol 0.438719080083235 0.438718593517132 0 0 hPsi_site_22680 iPseU_CNN:0;iRNA_PseU:0 22681 chrX 129629557 129629557 1 + C A LUSC 129629556 + 129629536 129629576 41 GCCAGAGTGAAGAAAACGGCTCTTTCCTTAGTAAGGATTTT GCCAGAGTGAAGAAAACGGCTATTTCCTTAGTAAGGATTTT < 41bp 0.519192089026353 0.842764541373333 0.16262409 0.17287204 prediction 0.647144904693961 Functional Gain - FAM45BP ENSG00000221930 ncRNA_exonic Human transcribed_processed_pseudogene chrX:129629556 chrX:129629557 . . 0 22 hPsi_associated_SNPs_28957 0 0 0 0 0 unknown 0.438718576572896 0.438720420714749 0 0 hPsi_site_22681 iPseU_CNN:0;iRNA_PseU:0 22682 chr21 47422511 47422511 1 + G A UCEC 47422510 + 47422490 47422530 41 ACCAGCTCAATGTCATTTCTTGCCAAGGCCTGGCACCATCC ACCAGCTCAATGTCATTTCTTACCAAGGCCTGGCACCATCC < 41bp 0.580892548927461 0.904464074702543 0.25759965 0.4363637 prediction 0.647143051550163 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47422510 chr21:47422511 nonsynonymous SNV 0.957 5 22 hPsi_associated_SNPs_28958 0 0 1 0 1 exosome 0.438710717736231 0.438287741577128 0 0 hPsi_site_22682 iPseU_CNN:0;iRNA_PseU:0 22683 chr8 55060129 55060129 1 + C A UCEC 55060128 + 55060108 55060148 41 TGGTTATATCTTACCTGATATCACTAAAGATGAACTCTTCA TGGTTATATCTTACCTGATATAACTAAAGATGAACTCTTCA < 41bp 0.47490016758054 0.823568807344072 0.15299967 0.28577957 prediction 0.647137614688144 Functional Gain - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060128 chr8:55060129 synonymous SNV . 0 22 hPsi_associated_SNPs_28959 0 0 1 0 0 Cytosol 0.439341559131812 0.440627686334689 0 0 hPsi_site_22683 iPseU_CNN:0;iRNA_PseU:0 22684 chr19 55505722 55505722 1 + C A COAD 55505721 + 55505701 55505741 41 TCAAGCCTGTTGTGTTTGGATCTGGGGCTGAATCACATAGG TCAAGCCTGTTGTGTTTGGATATGGGGCTGAATCACATAGG < 41bp 0.547486320416393 0.871041933656539 0.32845443 0.5087088 prediction 0.647111226480293 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55505721 chr19:55505722 nonsynonymous SNV 0.230 3 22 hPsi_associated_SNPs_28960 0 0 0 0 2 Cytosol 0.438990737499908 0.438705500403633 0.0174175999999999 0 hPsi_site_22684 iPseU_CNN:0.0174175999999999;iRNA_PseU:0 22685 chr11 55322111 55322111 1 + C A UCEC 55322110 + 55322090 55322130 41 GCAGCCCTGCTCTTCTGGTGTCTCCTATGTACTTCTTCTTG GCAGCCCTGCTCTTCTGGTGTATCCTATGTACTTCTTCTTG < 41bp 0.471029934949258 0.823554101854194 0.1575687 0.30944127 prediction 0.647108203708387 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322110 chr11:55322111 nonsynonymous SNV 0.111 1 22 hPsi_associated_SNPs_28961 0 0 0 0 0 unknown 0.438718464440373 0.43871859352375 0 0 hPsi_site_22685 iPseU_CNN:0;iRNA_PseU:0 22686 chr12 6970233 6970233 1 + G A LIHC 6970232 + 6970212 6970252 41 CCAGCGAGTTGACTACATCATGCAGCTGCCTGTGCCCATGG CCAGCGAGTTGACTACATCATACAGCTGCCTGTGCCCATGG < 41bp 0.583939952052389 0.90749262686437 0.2693844 0.41305816 prediction 0.64710534962396 Functional Gain - USP5 ENSG00000111667 CDS Human protein_coding chr12:6970232 chr12:6970233 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28962 0 0 1 0 1 Nucleus 0.438718530737797 0.438718511276944 0 0 hPsi_site_22686 iPseU_CNN:0;iRNA_PseU:0 22687 chr17 7127356 7127356 1 + C A UCEC 7127355 + 7127335 7127375 41 TTTGAGGGGACAAATGACATTCTTCGGCTGTTTGTGGCTCT TTTGAGGGGACAAATGACATTATTCGGCTGTTTGTGGCTCT < 41bp 0.547388278743813 0.870940190429257 0.24636751 0.2472572 prediction 0.647103823370888 Functional Gain - ACADVL ENSG00000072778 CDS Human protein_coding chr17:7127355 chr17:7127356 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_28963 0 0 1 0 2 Endoplasmic reticulum 0.438718570379696 0.438718444960251 0 0 hPsi_site_22687 iPseU_CNN:0;iRNA_PseU:0 22688 chr10 122624634 122624634 1 + C A rs560536574 122624633 + 122624613 122624653 41 AAGGAATCACATGTTGTTGCTCTATCCTCGAGAGATTTTAA AAGGAATCACATGTTGTTGCTATATCCTCGAGAGATTTTAA < 41bp 0.471450188657463 0.823551200396289 0.41763517 0.38023537 prediction 0.647102400792577 Functional Gain - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122624633 chr10:122624634 synonymous SNV . 0 22 hPsi_associated_SNPs_28964 0 0 1 0 2 Nucleus 0.438718747381974 0.438767070742548 0 0 hPsi_site_22688 iPseU_CNN:0;iRNA_PseU:0 22689 chr4 164272336 164272336 1 + C A UCEC 164272335 + 164272315 164272355 41 TACCTGCTCCAGAAAGACCTTCTCAAGAGAACCACTCCAGA TACCTGCTCCAGAAAGACCTTATCAAGAGAACCACTCCAGA < 41bp 0.467897282362066 0.823549468568041 0.48800173 0.71066993 prediction 0.647098937136082 Functional Gain - NPY5R ENSG00000164129 CDS Human protein_coding chr4:164272335 chr4:164272336 nonsynonymous SNV 0.648 0 22 hPsi_associated_SNPs_28965 0 0 0 0 0 unknown 0.438718567210914 0.438718637923921 0.42133986 0 hPsi_site_22689 iPseU_CNN:0.42133986;iRNA_PseU:0 22690 chr11 18159669 18159669 1 + G A rs78408237 18159668 + 18159648 18159688 41 AGGTGGATGAAGGTGGAGGGTGGCTTCCTCAGGAAACCCTG AGGTGGATGAAGGTGGAGGGTAGCTTCCTCAGGAAACCCTG < 41bp 0.569074120182923 0.892616314526424 0.30099335 0.4692629 prediction 0.647084388687002 Functional Gain - MRGPRX3 ENSG00000179826 CDS Human protein_coding chr11:18159668 chr11:18159669 stopgain 0.000 0 22 hPsi_associated_SNPs_28966 0 0 0 0 0 exosome 0.438718592995102 0.438718735450001 0 0 hPsi_site_22690 iPseU_CNN:0;iRNA_PseU:0 22691 chr8 104340586 104340586 1 + G T COAD 104340585 + 104340565 104340605 41 ATCTCTGCTGTCTTCTGGGTTGGAAGCAAAAAGACATGCAC ATCTCTGCTGTCTTCTGGGTTTGAAGCAAAAAGACATGCAC < 41bp 0.512157501758341 0.835698851859847 0.42816195 0.74970996 prediction 0.647082700203013 Functional Gain - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104340585 chr8:104340586 stopgain 1.000 1 22 hPsi_associated_SNPs_28967 0 0 1 0 1 Ribosome 0.438706239080105 0.438718421185006 0.49941992 0 hPsi_site_22691 iPseU_CNN:0.49941992;iRNA_PseU:0 22692 chr8 39786191 39786191 1 + G A rs539988422 39786190 + 39786170 39786210 41 TGAACCTGGGAGGCGGAGCTTGCAGTGAGCCAAGATTGTGC TGAACCTGGGAGGCGGAGCTTACAGTGAGCCAAGATTGTGC < 41bp 0.523624221566318 0.847162811809548 0.33882213 0.6209322 prediction 0.647077180486461 Functional Gain - IDO1 ENSG00000253939 ncRNA_intronic Human antisense chr8:39786190 chr8:39786191 . . 0 22 hPsi_associated_SNPs_28968 0 0 0 0 0 Cytosol 0.438728013419951 0.438758136093563 0.2418644 0 hPsi_site_22692 iPseU_CNN:0.2418644;iRNA_PseU:0 22693 chr16 56704472 56704472 1 + C A LUSC 56704471 + 56704451 56704491 41 GCAAAAAGTGCAAATGCACCTCCTGCAAGAAGAGTGAGTGC GCAAAAAGTGCAAATGCACCTACTGCAAGAAGAGTGAGTGC < 41bp 0.452742314170774 0.823533437084602 0.2841334 0.5317223 prediction 0.647066874169204 Functional Gain - MT1H ENSG00000205358 CDS Human protein_coding chr16:56704471 chr16:56704472 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_28969 0 0 0 0 1 Cytosol 0.43870319880148 0.437164395448264 0.0634446 0 hPsi_site_22693 iPseU_CNN:0.0634446;iRNA_PseU:0 22694 chr15 55647027 55647027 1 + C A UCEC 55647026 + 55647006 55647046 41 TGCCCACTTCCCATGAGATTTCTCCAGTGCCCGCCAGACCT TGCCCACTTCCCATGAGATTTATCCAGTGCCCGCCAGACCT < 41bp 0.540973213017643 0.864505990618993 0.20878002 0.23519036 prediction 0.647065555202701 Functional Gain - PIGB ENSG00000069943 CDS Human protein_coding chr15:55647026 chr15:55647027 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_28970 0 0 0 0 1 Endoplasmic reticulum 0.43871895586377 0.438718575521885 0 0 hPsi_site_22694 iPseU_CNN:0;iRNA_PseU:0 22695 chr19 4258349 4258349 1 + G T SARC 4258348 + 4258328 4258368 41 GCACGTGGACTTCGAGGCTATGCTGAGGCAGCACCGCCTGT GCACGTGGACTTCGAGGCTATTCTGAGGCAGCACCGCCTGT < 41bp 0.498667226264493 0.823526958918516 0.42347255 0.6728604 prediction 0.647053917837032 Functional Gain - CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4258348 chr19:4258349 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_28971 0 0 0 0 1 Ribosome 0.443463650826086 0.436754868939704 0.3457208 0 hPsi_site_22695 iPseU_CNN:0.3457208;iRNA_PseU:0 22696 chr18 72997507 72997507 1 + G A BLCA 72997506 + 72997486 72997526 41 GAAAGTGAGTACATGTGCAATGAAGAGACGGAGATCAAAGA GAAAGTGAGTACATGTGCAATAAAGAGACGGAGATCAAAGA < 41bp 0.422421149578291 0.823522496902831 0.3468563 0.38823104 prediction 0.647044993805662 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72997506 chr18:72997507 nonsynonymous SNV 0.026 2 22 hPsi_associated_SNPs_28972 0 0 1 0 0 Cytosol 0.438737562017043 0.438733629685821 0 0 hPsi_site_22696 iPseU_CNN:0;iRNA_PseU:0 22697 chr12 4705836 4705836 1 + G A COAD 4705835 + 4705815 4705855 41 AGACAACACCTACAATGTGGTGCATATGAAGGACTTTTTCT AGACAACACCTACAATGTGGTACATATGAAGGACTTTTTCT < 41bp 0.407375440374913 0.823514987725292 0.24979916 0.57456917 prediction 0.647029975450585 Functional Gain - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4705835 chr12:4705836 synonymous SNV . 0 22 hPsi_associated_SNPs_28973 0 0 1 0 2 Ribosome 0.438718577272854 0.438718490128823 0.14913834 0 hPsi_site_22697 iPseU_CNN:0.14913834;iRNA_PseU:0 22698 chr12 52374827 52374827 1 + G T COAD 52374826 + 52374806 52374846 41 ATTATTGGCAAGGGTCGGTTTGGGGAAGTATGGCGGGGCCG ATTATTGGCAAGGGTCGGTTTTGGGAAGTATGGCGGGGCCG < 41bp 0.486943887144203 0.823513409952444 0.24569729 0.35679013 prediction 0.647026819904888 Functional Gain - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52374826 chr12:52374827 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_28974 0 0 1 0 0 Endoplasmic reticulum 0.438720389748925 0.438718593004021 0 0 hPsi_site_22698 iPseU_CNN:0;iRNA_PseU:0 22699 chr12 55759166 55759166 1 + C A LUAD 55759165 + 55759145 55759185 41 TGACAGGAAACAGAACCATTTCTTATAATGGGTGTGTGGCT TGACAGGAAACAGAACCATTTATTATAATGGGTGTGTGGCT < 41bp 0.520539601338964 0.844050464400958 0.2490027 0.28844407 prediction 0.647021726123989 Functional Gain - OR6C75 ENSG00000187857 CDS Human protein_coding chr12:55759165 chr12:55759166 nonsynonymous SNV 0.677 1 22 hPsi_associated_SNPs_28975 0 0 0 0 0 unknown 0.438750677761916 0.438725724991166 0 0 hPsi_site_22699 iPseU_CNN:0;iRNA_PseU:0 22700 chr14 65008635 65008635 1 + C A UCEC 65008634 + 65008614 65008654 41 CCAGAAGCTGCTGCAGGATTTCTTCAACGGCAAGGAGCTGA CCAGAAGCTGCTGCAGGATTTATTCAACGGCAAGGAGCTGA < 41bp 0.539252769800148 0.862762232292679 0.48587742 0.75432014 prediction 0.647018924985062 Functional Gain - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65008634 chr14:65008635 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_28976 0 0 1 0 0 Cytosol 0.438718593021389 0.438742484225644 0.50864028 0 hPsi_site_22700 iPseU_CNN:0.50864028;iRNA_PseU:0 22701 chr21 43702512 43702512 1 + C A READ 43702511 + 43702491 43702531 41 GAACAACCCTCCAGTCATGTTCTTCGATGAGCCCACCAGGT GAACAACCCTCCAGTCATGTTATTCGATGAGCCCACCAGGT < 41bp 0.446244632014416 0.823495954512329 0.6804346 0.7410432 prediction 0.646991909024657 Functional Gain - ABCG1 ENSG00000160179 CDS Human protein_coding chr21:43702511 chr21:43702512 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_28977 0 0 0 0 1 Cytosol 0.438718592802403 0.438718594055384 0.1212172 0 hPsi_site_22701 iPseU_CNN:0.1212172;iRNA_PseU:0 22702 chr7 148457552 148457552 1 + C A GBM 148457551 + 148457531 148457571 41 TACCAGAGAGAGTACTGAATTCTTGCAGCAGAACCCAGTTA TACCAGAGAGAGTACTGAATTATTGCAGCAGAACCCAGTTA < 41bp 0.543750152007845 0.867245633684751 0.3098573 0.34688112 prediction 0.646990963353812 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148457551 chr7:148457552 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_28978 0 0 1 0 1 Nucleus 0.438647928366806 0.438718788845455 0 0 hPsi_site_22702 iPseU_CNN:0;iRNA_PseU:0 22703 chr22 32009819 32009819 1 + G A BLCA 32009818 + 32009798 32009838 41 GCTCTGGGCCGCCTGGCTGCTGAGGAGCCCCACGCCCTGGA GCTCTGGGCCGCCTGGCTGCTAAGGAGCCCCACGCCCTGGA < 41bp 0.413066428662293 0.82349135173309 0.20710763 0.25501055 prediction 0.64698270346618 Functional Gain - SFI1 ENSG00000198089 CDS Human protein_coding chr22:32009818 chr22:32009819 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_28979 0 0 1 0 1 chromatin 0.438718592995102 0.438718592995102 0 0 hPsi_site_22703 iPseU_CNN:0;iRNA_PseU:0 22704 chr7 150730953 150730953 1 + C A BLCA 150730952 + 150730932 150730972 41 GTCTCGCTTTAACTGGAAGCTCTTCTGGCAGTTTCTGCACC GTCTCGCTTTAACTGGAAGCTATTCTGGCAGTTTCTGCACC < 41bp 0.543685447269972 0.867176731176197 0.3492307 0.52644587 prediction 0.646982567812451 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150730952 chr7:150730953 synonymous SNV . 0 22 hPsi_associated_SNPs_28980 0 0 1 0 1 Ribosome 0.43867971812254 0.438718541336546 0.05289174 0 hPsi_site_22704 iPseU_CNN:0.05289174;iRNA_PseU:0 22705 chr17 21208386 21208386 1 + G A SKCM 21208385 + 21208365 21208405 41 TGAGAGGATCAACCCAGAGCTGAACCAGAAGGGCTACAATG TGAGAGGATCAACCCAGAGCTAAACCAGAAGGGCTACAATG < 41bp 0.399808586336306 0.823477602561789 0.16705698 0.22620878 prediction 0.646955205123578 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21208385 chr17:21208386 synonymous SNV . 0 22 hPsi_associated_SNPs_28981 0 0 1 0 2 Ribosome 0.391542332602991 0.438718556340832 0 0 hPsi_site_22705 iPseU_CNN:0;iRNA_PseU:0 22706 chr14 73945437 73945437 1 + C A COAD 73945436 + 73945416 73945456 41 TGGTCCCACAGCAATCCTTTTCTCGGGGGAGGTGCGTAGAT TGGTCCCACAGCAATCCTTTTATCGGGGGAGGTGCGTAGAT < 41bp 0.478688844960923 0.823474299490057 0.79877365 0.7965219 prediction 0.646948598980114 Functional Gain - HEATR4 ENSG00000187105 CDS Human protein_coding chr14:73945436 chr14:73945437 nonsynonymous SNV 0.075 4 22 hPsi_associated_SNPs_28982 0 0 0 0 0 Endoplasmic reticulum 0.438724128239003 0.438710648540959 0 0 hPsi_site_22706 iPseU_CNN:0;iRNA_PseU:0 22707 chr15 90611795 90611795 1 + C A THCA 90611794 + 90611774 90611814 41 GGCATGGAGTTCAGCCAGATTCACCACCTCAAGCAGCACTC GGCATGGAGTTCAGCCAGATTAACCACCTCAAGCAGCACTC < 41bp 0.529067521890852 0.852540834784326 0.24088591 0.43152592 prediction 0.646946625786947 Functional Gain - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90611794 chr15:90611795 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_28983 0 0 1 0 1 Endoplasmic reticulum 0.438707738007866 0.438711761686624 0 0 hPsi_site_22707 iPseU_CNN:0;iRNA_PseU:0 Lung function (FEV1/FVC) 22708 chr2 220409514 220409514 1 + G A SKCM 220409513 + 220409493 220409533 41 CTGAGCCAGATGATGCCTTCTGGGGTGCACCTTGTGAACAG CTGAGCCAGATGATGCCTTCTAGGGTGCACCTTGTGAACAG < 41bp 0.411708614655614 0.823469228627313 0.23502192 0.41167173 prediction 0.646938457254625 Functional Gain - TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220409513 chr2:220409514 stopgain 0.994 1 22 hPsi_associated_SNPs_28984 0 0 0 0 1 chromatin 0.438806779550511 0.438718583974262 0 0 hPsi_site_22708 iPseU_CNN:0;iRNA_PseU:0 22709 chr15 23261866 23261866 1 + C A STAD 23261865 + 23261845 23261885 41 AGGAGCGCTCCAGGCCCAGGTCAAAAACAATCAGCGCATAA AGGAGCGCTCCAGGCCCAGGTAAAAAACAATCAGCGCATAA < 41bp 0.552723108667633 0.876192265962748 0.4321518 0.70618546 prediction 0.646938314590229 Functional Gain - GOLGA8IP ENSG00000153666 CDS Human other chr15:23261865 chr15:23261866 synonymous SNV . 0 22 hPsi_associated_SNPs_28985 0 0 0 0 0 unknown 0.440052360469604 0.438727541350419 0.41237092 0 hPsi_site_22709 iPseU_CNN:0.41237092;iRNA_PseU:0 22710 chr16 1035686 1035686 1 + G A rs11861696 1035685 + 1035665 1035705 41 CGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAA CGGCACCAGCACCTTCGCTTTACATCTCGGTAGAGGAGAAA < 41bp 0.559674951076865 0.88314197231891 0.2704922 0.471207 prediction 0.646934042484091 Functional Gain - SOX8 ENSG00000005513 UTR3 Human protein_coding chr16:1035685 chr16:1035686 . . 0 22 hPsi_associated_SNPs_28986 0 0 0 0 0 exosome 0.438732980979527 0.438641039538095 0 0 hPsi_site_22710 iPseU_CNN:0;iRNA_PseU:0 22711 chr12 55714789 55714789 1 + C A GBM 55714788 + 55714768 55714808 41 CATTGCTTGAGTATCATGAATCGAAGAGTCTGCACACTGCT CATTGCTTGAGTATCATGAATAGAAGAGTCTGCACACTGCT < 41bp 0.51116363445056 0.834624711738411 0.36500442 0.32954627 prediction 0.646922154575703 Functional Gain - OR6C1 ENSG00000205330 CDS Human protein_coding chr12:55714788 chr12:55714789 synonymous SNV . 0 22 hPsi_associated_SNPs_28987 0 0 0 0 0 unknown 0.438445386729916 0.437793948625656 0 0 hPsi_site_22711 iPseU_CNN:0;iRNA_PseU:0 22712 chr8 106813404 106813404 1 + G A BLCA 106813403 + 106813383 106813423 41 TCACTCAAGCTGCCTTCCGATGTAATCACTGCCATTTCGGC TCACTCAAGCTGCCTTCCGATATAATCACTGCCATTTCGGC < 41bp 0.429468943888609 0.823452599047908 0.30516547 0.49393094 prediction 0.646905198095816 Functional Gain - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106813403 chr8:106813404 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_28988 0 0 0 0 0 chromatin 0.438718593597321 0.438718669628252 0 0 hPsi_site_22712 iPseU_CNN:0;iRNA_PseU:0 22713 chr19 51919281 51919281 1 + G A OV 51919280 + 51919260 51919300 41 GGGGTCTAGGGCCCCAGGGATGGGACGAGGAGAGGACTCTG GGGGTCTAGGGCCCCAGGGATAGGACGAGGAGAGGACTCTG < 41bp 0.423177358179578 0.823445251527042 0.19636661 0.27330035 prediction 0.646890503054085 Functional Gain - LOC100129083;SIGLEC10 ENSG00000142512 CDS Human protein_coding chr19:51919280 chr19:51919281 nonsynonymous SNV 0.001 2 22 hPsi_associated_SNPs_28989 0 0 0 0 0 unknown 0.438718564934234 0.438719339790033 0 0 hPsi_site_22713 iPseU_CNN:0;iRNA_PseU:0 22714 chr17 3324524 3324524 1 + C A UCEC 3324523 + 3324503 3324543 41 CATGGCTGTGGCACCCTTGGTCTTCATCAGTGTGTCCTATG CATGGCTGTGGCACCCTTGGTATTCATCAGTGTGTCCTATG < 41bp 0.522163924541443 0.845605181852622 0.37206253 0.7216255 prediction 0.646882514622359 Functional Gain - OR3A3 ENSG00000159961 CDS Human protein_coding chr17:3324523 chr17:3324524 synonymous SNV . 0 22 hPsi_associated_SNPs_28990 0 0 0 0 0 exosome 0.438401979714613 0.438718437400315 0.443251 0 hPsi_site_22714 iPseU_CNN:0.443251;iRNA_PseU:0 22715 chr8 105361267 105361267 1 + G A LUSC 105361266 + 105361246 105361286 41 ACTCCACTAAGTGTATTTGATGACCTTGTTTCTTGGAACCA ACTCCACTAAGTGTATTTGATAACCTTGTTTCTTGGAACCA < 41bp 0.410433460503999 0.823437574900229 0.29054755 0.39133772 prediction 0.646875149800459 Functional Gain - DCSTAMP ENSG00000164935 CDS Human protein_coding chr8:105361266 chr8:105361267 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_28991 0 0 0 0 0 exosome 0.439532074192104 0.43880503928216 0 0 hPsi_site_22715 iPseU_CNN:0;iRNA_PseU:0 22716 chr6 106554286 106554286 1 + G A STAD 106554285 + 106554265 106554305 41 GTGGAGAACGGCCTTTCAAATGTCAGACTTGCAACAAGGGC GTGGAGAACGGCCTTTCAAATATCAGACTTGCAACAAGGGC < 41bp 0.402634948429551 0.823434032036777 0.23388827 0.58739346 prediction 0.646868064073555 Functional Gain - PRDM1 ENSG00000057657 CDS Human protein_coding chr6:106554285 chr6:106554286 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_28992 0 0 0 0 2 cytosol 0.438879156960998 0.438722898991618 0.17478692 0 hPsi_site_22716 iPseU_CNN:0.17478692;iRNA_PseU:0 22717 chr14 101448324 101448324 1 + G A LUSC 101448323 + 101448303 101448343 41 GGCCATTCCTGGATCAATGATGACCACTGGTGGCGTATGAG GGCCATTCCTGGATCAATGATAACCACTGGTGGCGTATGAG < 41bp 0.481758726936066 0.823428480403957 0.13820753 0.20625812 prediction 0.646856960807914 Functional Gain - SNORD114-21 ENSG00000272344 ncRNA_exonic Human snoRNA chr14:101448323 chr14:101448324 . . 0 22 hPsi_associated_SNPs_28993 0 0 0 0 0 unknown 0.438693970876352 0.438737636679899 0 0 hPsi_site_22717 iPseU_CNN:0;iRNA_PseU:0 22718 chr11 126147521 126147521 1 + G T BRCA 126147520 + 126147500 126147540 41 CAGGTTCCAGACCATCGACCTGAGCCCCTTCCTCTTTACCC CAGGTTCCAGACCATCGACCTTAGCCCCTTCCTCTTTACCC < 41bp 0.496356833487892 0.823426312124205 0.2031351 0.29626065 prediction 0.64685262424841 Functional Gain - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126147520 chr11:126147521 synonymous SNV . 0 22 hPsi_associated_SNPs_28994 0 0 1 2 0 Ribosome 0.438718580961407 0.43873700063369 0 0 hPsi_site_22718 iPseU_CNN:0;iRNA_PseU:0 22719 chr5 71616258 71616258 1 + C A COAD 71616257 + 71616237 71616277 41 TTTCGGCCCTCGAATCGAGTTCTCCTGCAGGCGCTGCAGAT TTTCGGCCCTCGAATCGAGTTATCCTGCAGGCGCTGCAGAT < 41bp 0.517199762612497 0.840625350955103 0.29684448 0.5150416 prediction 0.646851176685213 Functional Gain - PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71616257 chr5:71616258 nonsynonymous SNV 0.008 0 22 hPsi_associated_SNPs_28995 0 0 0 0 1 chromatin 0.438718572794462 0.438707620996496 0.0300832 0 hPsi_site_22719 iPseU_CNN:0.0300832;iRNA_PseU:0 22720 chr17 55184187 55184187 1 + C A LUAD 55184186 + 55184166 55184206 41 CAAGGACAGTAAGCCAAATATCTCTGCACACCACATCTCCC CAAGGACAGTAAGCCAAATATATCTGCACACCACATCTCCC < 41bp 0.550708381319867 0.874132607296764 0.30229893 0.32579392 prediction 0.646848451953793 Functional Gain - AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55184186 chr17:55184187 synonymous SNV . 0 22 hPsi_associated_SNPs_28996 0 0 1 0 0 Endoplasmic reticulum 0.438948149901187 0.438567874480485 0 0 hPsi_site_22720 iPseU_CNN:0;iRNA_PseU:0 22721 chr4 47559754 47559754 1 + C A UCEC 47559753 + 47559733 47559773 41 AAAGTCTTTTCCAGAGATGGTCTGTCCGAAGATCAAGTTCT AAAGTCTTTTCCAGAGATGGTATGTCCGAAGATCAAGTTCT < 41bp 0.461741368504629 0.82342396601751 0.19908196 0.30554852 prediction 0.646847932035019 Functional Gain - ATP10D ENSG00000145246 CDS Human protein_coding chr4:47559753 chr4:47559754 nonsynonymous SNV 0.029 4 22 hPsi_associated_SNPs_28997 0 0 0 0 1 exosome 0.438718592985988 0.438718592995102 0 0 hPsi_site_22721 iPseU_CNN:0;iRNA_PseU:0 22722 chr9 131680041 131680041 1 + G A rs41275932 131680040 + 131680020 131680060 41 CCCAGTCGGCACCTGGTGGCTGGAAGCCACCCTGCTTTAGA CCCAGTCGGCACCTGGTGGCTAGAAGCCACCCTGCTTTAGA < 41bp 0.522284236463777 0.845707558948002 0.41943103 0.83673704 prediction 0.646846644968452 Functional Gain - LRRC8A ENSG00000136802 UTR3 Human protein_coding chr9:131680040 chr9:131680041 . . 0 22 hPsi_associated_SNPs_28998 0 0 1 0 0 Endoplasmic reticulum 0.442730141757759 0.43871862788831 0.67347408 0 hPsi_site_22722 iPseU_CNN:0.67347408;iRNA_PseU:0 22723 chrX 44703607 44703607 1 + C A rs767788882 44703606 + 44703586 44703626 41 AAGGTGCCTGTTACCGATGCTCGTGACTCGCGTCTCTACGA AAGGTGCCTGTTACCGATGCTAGTGACTCGCGTCTCTACGA < 41bp 0.47178638970024 0.823421102927516 0.1836294 0.32666874 prediction 0.646842205855033 Functional Gain - DUSP21 ENSG00000189037 CDS Human protein_coding chrX:44703606 chrX:44703607 nonsynonymous SNV 0.003 3 22 hPsi_associated_SNPs_28999 0 0 0 0 0 exosome 0.439417278637657 0.438720889066845 0 0 hPsi_site_22723 iPseU_CNN:0;iRNA_PseU:0 22724 chr16 2025678 2025678 1 + C A rs17602 2025677 + 2025657 2025697 41 CGCCGACCACAACCTGTTGCTCTACGAGGCTCGCTCCCTGC CGCCGACCACAACCTGTTGCTATACGAGGCTCGCTCCCTGC < 41bp 0.53488061376861 0.85829696807692 0.71785307 0.8413752 prediction 0.646832708616621 Functional Gain - TBL3 ENSG00000183751 CDS Human protein_coding chr16:2025677 chr16:2025678 synonymous SNV . 0 22 hPsi_associated_SNPs_29000 0 0 0 0 1 Nucleus 0.43862438122008 0.438719144637398 0.24704426 0 hPsi_site_22724 iPseU_CNN:0.24704426;iRNA_PseU:0 22725 chr3 52522091 52522091 1 + C A rs77768459 52522090 + 52522070 52522110 41 CTGCTTCCCCGTCTACCTGGTCTACAGTGACAAGCGCATGG CTGCTTCCCCGTCTACCTGGTATACAGTGACAAGCGCATGG < 41bp 0.466734649797479 0.823415958928492 0.67815685 0.8382246 prediction 0.646831917856984 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52522090 chr3:52522091 synonymous SNV . 0 22 hPsi_associated_SNPs_29001 0 0 1 0 0 Cytosol 0.438718592428918 0.438717734499581 0.3201355 0 hPsi_site_22725 iPseU_CNN:0.3201355;iRNA_PseU:0 22726 chr6 35258465 35258465 1 + C A rs140038187 35258464 + 35258444 35258484 41 CCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCT CCGTCCATACAGATGTGACTTACCCAGCTGTGGAAAGGCCT < 41bp 0.45088934394284 0.823413425699623 0.2233746 0.2578621 prediction 0.646826851399245 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35258464 chr6:35258465 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29002 0 0 1 0 2 Cytosol 0.438718645030248 0.438719838372796 0 0 hPsi_site_22726 iPseU_CNN:0;iRNA_PseU:0 22727 chr1 161185114 161185114 1 + G A LUSC 161185113 + 161185093 161185133 41 GGCCGATCTCCAGCCCAAGATGATTCCAGCAGTGGTCTTGC GGCCGATCTCCAGCCCAAGATAATTCCAGCAGTGGTCTTGC < 41bp 0.425674462384638 0.823413183494817 0.21156144 0.26259702 prediction 0.646826366989633 Functional Gain - FCER1G ENSG00000158869 CDS Human protein_coding chr1:161185113 chr1:161185114 nonsynonymous SNV 0.982 0 22 hPsi_associated_SNPs_29003 0 0 1 0 1 Endoplasmic reticulum 0.438744072569175 0.438716351066198 0 0 hPsi_site_22727 iPseU_CNN:0;iRNA_PseU:0 22728 chr17 45788076 45788076 1 + G A rs188825452 45788075 + 45788055 45788095 41 TGAATGCTGCATGAATCTCGTGGGGGGTCCCTGCCCTTGCG TGAATGCTGCATGAATCTCGTAGGGGGTCCCTGCCCTTGCG < 41bp 0.561237455841867 0.884649433849994 0.24479485 0.3527277 prediction 0.646823956016254 Functional Gain - TBKBP1 ENSG00000198933 UTR3 Human protein_coding chr17:45788075 chr17:45788076 . . 0 22 hPsi_associated_SNPs_29004 0 0 1 0 0 Cytosol 0.438726075777741 0.438718596405942 0 0 hPsi_site_22728 iPseU_CNN:0;iRNA_PseU:0 22729 chr14 99183496 99183496 1 + C A UCEC 99183495 + 99183475 99183515 41 GCCAGAGACATGAAGAAACTTCTCCAGGGTCATGTAATCAC GCCAGAGACATGAAGAAACTTATCCAGGGTCATGTAATCAC < 41bp 0.47546994625915 0.823411332603273 0.58388627 0.59403694 prediction 0.646822665206545 Functional Gain - C14orf177 ENSG00000176605 CDS Human protein_coding chr14:99183495 chr14:99183496 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_29005 0 0 0 0 1 unknown 0.438723689051689 0.438713567538955 0.0203013399999998 0 hPsi_site_22729 iPseU_CNN:0.0203013399999998;iRNA_PseU:0 22730 chr16 31213960 31213960 1 + C A LUSC 31213959 + 31213939 31213979 41 GCTTGAACTTCTTGAGCTCCTCGGCGGTCAGGTTCTCCAGC GCTTGAACTTCTTGAGCTCCTAGGCGGTCAGGTTCTCCAGC < 41bp 0.539759492317835 0.86317010733436 0.1591048 0.18840632 prediction 0.64682123003305 Functional Gain - PYCARD ENSG00000103490;ENSG00000261359 CDS Human other chr16:31213959 chr16:31213960 stopgain 0.058 0 22 hPsi_associated_SNPs_29006 0 0 1 0 0 Ribosome 0.438660775332169 0.438716733026122 0 0 hPsi_site_22730 iPseU_CNN:0;iRNA_PseU:0 22731 chr12 71974126 71974126 1 + C A UCEC 71974125 + 71974105 71974145 41 GTGAGAATGCCTATAAGATTTCTAATCAATGGAATAAAGGT GTGAGAATGCCTATAAGATTTATAATCAATGGAATAAAGGT < 41bp 0.464175022845528 0.823410418714091 0.25211155 0.33978295 prediction 0.646820837428183 Functional Gain - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71974125 chr12:71974126 nonsynonymous SNV 0.951 1 22 hPsi_associated_SNPs_29007 0 0 1 0 1 Nucleus 0.438585566432178 0.440204450461266 0 0 hPsi_site_22731 iPseU_CNN:0;iRNA_PseU:0 22732 chr1 55136198 55136198 1 + C A OV 55136197 + 55136177 55136217 41 TCCAGGAGGAGCCACTGGATTCTCTCTCAAGCTCCGTCCGC TCCAGGAGGAGCCACTGGATTATCTCTCAAGCTCCGTCCGC < 41bp 0.545099182819855 0.868509063341081 0.55762446 0.8444308 prediction 0.646819761042451 Functional Gain - MROH7 ENSG00000184313;ENSG00000271723 CDS Human other chr1:55136197 chr1:55136198 nonsynonymous SNV 0.500 3 22 hPsi_associated_SNPs_29008 0 0 0 0 3 exosome 0.438718259761914 0.438718501397799 0.57361268 0 hPsi_site_22732 iPseU_CNN:0.57361268;iRNA_PseU:0 22733 chrX 53106324 53106324 1 + G A COAD 53106323 + 53106303 53106343 41 TTATTCGGGAGGAGGACCAGTGCATCTTTGAGCATCGCTAC TTATTCGGGAGGAGGACCAGTACATCTTTGAGCATCGCTAC < 41bp 0.407217070379162 0.823407936504725 0.39408413 0.60289407 prediction 0.64681587300945 Functional Gain - GPR173 ENSG00000184194 CDS Human protein_coding chrX:53106323 chrX:53106324 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29009 0 0 0 0 0 exosome 0.438718979543347 0.438736893976078 0.20578814 0 hPsi_site_22733 iPseU_CNN:0.20578814;iRNA_PseU:0 22734 chr11 56113868 56113868 1 + C A COAD 56113867 + 56113847 56113887 41 GATTTTCATCATCTCTGAGCTCTTTATTCTATCAGCAATGG GATTTTCATCATCTCTGAGCTATTTATTCTATCAGCAATGG < 41bp 0.520541237913858 0.843948910768282 0.2128022 0.28204274 prediction 0.646815345708848 Functional Gain - OR8K1 ENSG00000150261 CDS Human protein_coding chr11:56113867 chr11:56113868 synonymous SNV . 0 22 hPsi_associated_SNPs_29010 0 0 0 0 0 unknown 0.438797717010472 0.439674435469152 0 0 hPsi_site_22734 iPseU_CNN:0;iRNA_PseU:0 22735 chr3 51746554 51746554 1 + G T SARC 51746553 + 51746533 51746573 41 CGCCTCTACCAGTGCCAAGCTGAGTGACAAGTCCCGCTATG CGCCTCTACCAGTGCCAAGCTTAGTGACAAGTCCCGCTATG < 41bp 0.502527975846307 0.825929746665812 0.25941467 0.7144727 prediction 0.646803541639009 Functional Gain - GRM2 ENSG00000164082 CDS Human protein_coding chr3:51746553 chr3:51746554 synonymous SNV . 0 22 hPsi_associated_SNPs_29011 0 0 0 0 1 Endoplasmic reticulum 0.438718595445738 0.438718286251637 0.4289454 0 hPsi_site_22735 iPseU_CNN:0.4289454;iRNA_PseU:0 22736 chr17 72239552 72239552 1 + C A BLCA 72239551 + 72239531 72239571 41 GCTCTTTATCCTGGACCTGGTCATCTGCCTCATTGCCTGCC GCTCTTTATCCTGGACCTGGTAATCTGCCTCATTGCCTGCC < 41bp 0.443053722342637 0.823401685925201 0.27365604 0.8238198 prediction 0.646803371850403 Functional Gain - TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72239551 chr17:72239552 synonymous SNV . 0 22 hPsi_associated_SNPs_29012 0 0 1 0 2 Endoplasmic reticulum 0.438718142367504 0.43871859278645 0.6476396 0 hPsi_site_22736 iPseU_CNN:0.6476396;iRNA_PseU:0 22737 chr11 94340751 94340751 1 + C A rs114896849 94340750 + 94340730 94340770 41 GATGAGTATCGCCACCAAGATCGCTATGCAGATGACTTGCA GATGAGTATCGCCACCAAGATAGCTATGCAGATGACTTGCA < 41bp 0.451613234824964 0.823399737053264 0.2901839 0.3197654 prediction 0.646799474106527 Functional Gain - PIWIL4 ENSG00000134627 CDS Human protein_coding chr11:94340750 chr11:94340751 synonymous SNV . 0 22 hPsi_associated_SNPs_29013 0 0 0 1 1 exosome 0.438540330521523 0.438698809984554 0 0 hPsi_site_22737 iPseU_CNN:0;iRNA_PseU:0 22738 chr2 220503474 220503474 1 + C A LUAD 220503473 + 220503453 220503493 41 TGACCTCTCCCGATAAGCGCTCGTGGTTCATCCCACCCCTG TGACCTCTCCCGATAAGCGCTAGTGGTTCATCCCACCCCTG < 41bp 0.448878697014611 0.823399063724044 0.16396126 0.41615587 prediction 0.646798127448087 Functional Gain - SLC4A3 ENSG00000114923 CDS Human protein_coding chr2:220503473 chr2:220503474 stopgain 0.943 1 22 hPsi_associated_SNPs_29014 0 0 0 0 1 Cytosol 0.436682631651609 0.438609985591449 0 0 hPsi_site_22738 iPseU_CNN:0;iRNA_PseU:0 22739 chr11 55587639 55587639 1 + C A COAD 55587638 + 55587618 55587658 41 TTTCAACACAATCAATCACTTCTTCTGTGAGTTCTCCTCAC TTTCAACACAATCAATCACTTATTCTGTGAGTTCTCCTCAC < 41bp 0.507864441221332 0.831261460309241 0.4110635 0.44816098 prediction 0.646794038175817 Functional Gain - OR5D18 ENSG00000186119 CDS Human protein_coding chr11:55587638 chr11:55587639 nonsynonymous SNV 0.892 4 22 hPsi_associated_SNPs_29015 0 0 0 0 0 unknown 0.439057449402402 0.438769737275034 0 0 hPsi_site_22739 iPseU_CNN:0;iRNA_PseU:0 22740 chr8 99440249 99440249 1 + C A PRAD 99440248 + 99440228 99440268 41 GGACGTGTCGGAGGCTAACGTCGAGGACGGGGAGATCCGCA GGACGTGTCGGAGGCTAACGTAGAGGACGGGGAGATCCGCA < 41bp 0.532530558818853 0.855925619933388 0.21826732 0.44305757 prediction 0.646790122229072 Functional Gain - KCNS2 ENSG00000156486 CDS Human protein_coding chr8:99440248 chr8:99440249 synonymous SNV . 0 22 hPsi_associated_SNPs_29016 0 0 0 0 1 exosome 0.438729050574864 0.438100042006447 0 0 hPsi_site_22740 iPseU_CNN:0;iRNA_PseU:0 22741 chr19 3534455 3534455 1 + G T LIHC 3534454 + 3534434 3534474 41 GGGGAGGCCATCGTCACTGGTGCTGGAGACGAGACCCTGAG GGGGAGGCCATCGTCACTGGTTCTGGAGACGAGACCCTGAG < 41bp 0.480647346755161 0.823381726433243 0.15982047 0.49169832 prediction 0.646763452866485 Functional Gain - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3534454 chr19:3534455 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_29017 0 0 1 0 3 Ribosome 0.438718489354826 0.43871056845003 0 0 hPsi_site_22741 iPseU_CNN:0;iRNA_PseU:0 22742 chr2 68607896 68607896 1 + C A UCS 68607895 + 68607875 68607915 41 GACCAAACAGCAGGACCACTTCTTCCAGGCAGCCTTCCTGG GACCAAACAGCAGGACCACTTATTCCAGGCAGCCTTCCTGG < 41bp 0.5467074780076 0.870088001457599 0.6251341 0.6880969 prediction 0.646761046899998 Functional Gain - PLEK ENSG00000115956 CDS Human protein_coding chr2:68607895 chr2:68607896 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29018 0 0 0 0 1 exosome 0.438718591277744 0.438720584041807 0.1259256 0 hPsi_site_22742 iPseU_CNN:0.1259256;iRNA_PseU:0 22743 chr22 38202927 38202927 1 + G A rs80219930 38202926 + 38202906 38202946 41 GTCAGCCAAGTGCCTCAGTGTGCCCTGTTGAAACTTAGGTT GTCAGCCAAGTGCCTCAGTGTACCCTGTTGAAACTTAGGTT < 41bp 0.438905143429113 0.823371876591082 0.24021316 0.42422545 prediction 0.646743753182164 Functional Gain - H1F0 ENSG00000189060 UTR3 Human protein_coding chr22:38202926 chr22:38202927 . . 0 22 hPsi_associated_SNPs_29019 0 0 1 1 0 Ribosome 0.438718224681134 0.438718558539184 0 0 hPsi_site_22743 iPseU_CNN:0;iRNA_PseU:0 22744 chr3 128976426 128976426 1 + G A LUSC 128976425 + 128976405 128976445 41 GTCTCCCTTTGCCTACTGCATGATGATCCGGGTGGCCAGCA GTCTCCCTTTGCCTACTGCATAATGATCCGGGTGGCCAGCA < 41bp 0.405873126710945 0.823369104282874 0.12077147 0.2942145 prediction 0.646738208565747 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128976425 chr3:128976426 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29020 0 0 1 0 1 Nucleus 0.437857023074174 0.43872027580749 0 0 hPsi_site_22744 iPseU_CNN:0;iRNA_PseU:0 22745 chr12 58168508 58168508 1 + C A UCEC 58168507 + 58168487 58168527 41 GTGGACATGCTCTATCCATGTCTACCATGACTCCCTGGGAA GTGGACATGCTCTATCCATGTATACCATGACTCCCTGGGAA < 41bp 0.467206358942248 0.823368662449073 0.32705986 0.44428098 prediction 0.646737324898146 Functional Gain - EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58168507 chr12:58168508 nonsynonymous SNV 0.007 0 22 hPsi_associated_SNPs_29021 0 0 0 1 2 unknown 0.438724326100685 0.438754551218152 0 0 hPsi_site_22745 iPseU_CNN:0;iRNA_PseU:0 22746 chr3 97869045 97869045 1 + G A SKCM 97869044 + 97869024 97869064 41 ACAGGCTGATGACCAAGATATGATGGAGTCTCTATTTTACA ACAGGCTGATGACCAAGATATAATGGAGTCTCTATTTTACA < 41bp 0.453068025210143 0.823366695800584 0.21010825 0.3740316 prediction 0.646733391601167 Functional Gain - OR5H14 ENSG00000236032 CDS Human protein_coding chr3:97869044 chr3:97869045 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_29022 0 0 0 0 0 unknown 0.438714195407948 0.438731171786856 0 0 hPsi_site_22746 iPseU_CNN:0;iRNA_PseU:0 22747 chr11 65009514 65009514 1 + C A COAD 65009513 + 65009493 65009533 41 AAGAGAAGAGTGAAGAAATTTCTCTTCAGCAGCTGAGAGCA AAGAGAAGAGTGAAGAAATTTATCTTCAGCAGCTGAGAGCA < 41bp 0.49968676381063 0.823361886073643 0.5746769 0.39566693 prediction 0.646723772147286 Functional Gain - SLC22A20;POLA2 ENSG00000197847 ncRNA_exonic Human transcribed_unitary_pseudogene chr11:65009513 chr11:65009514 . . 0 22 hPsi_associated_SNPs_29023 0 0 0 1 0 unknown 0.437404386792235 0.438721875477022 0 0 hPsi_site_22747 iPseU_CNN:0;iRNA_PseU:0 22748 chr2 234164774 234164774 1 + C A SKCM 234164773 + 234164753 234164793 41 AAATTGCTGGAAAAGTCAGATCTTCATTCAGTGTTGGCCCA AAATTGCTGGAAAAGTCAGATATTCATTCAGTGTTGGCCCA < 41bp 0.471976638886823 0.823360413638511 0.36986995 0.40601277 prediction 0.646720827277022 Functional Gain - ATG16L1 ENSG00000085978 CDS Human protein_coding chr2:234164773 chr2:234164774 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29024 0 0 1 0 2 Ribosome 0.438718093535739 0.438782732784935 0 0 hPsi_site_22748 iPseU_CNN:0;iRNA_PseU:0 22749 chr1 156347952 156347952 1 + G A LUSC 156347951 + 156347931 156347971 41 GGTGAGAGTCTGGGGAGGGATGGAGTCGGGGGTGGGGGGTG GGTGAGAGTCTGGGGAGGGATAGAGTCGGGGGTGGGGGGTG < 41bp 0.410541713104334 0.823359462122678 0.23385441 0.32344085 prediction 0.646718924245356 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156347951 chr1:156347952 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_29025 0 0 1 0 0 Cytosol 0.438718593153145 0.438718594887394 0 0 hPsi_site_22749 iPseU_CNN:0;iRNA_PseU:0 22750 chr6 160176185 160176185 1 + C A THCA 160176184 + 160176164 160176204 41 CAGTACCAGCAGCAGCAGTCTCAGGCCTCTGCCCCAAGTAC CAGTACCAGCAGCAGCAGTCTAAGGCCTCTGCCCCAAGTAC < 41bp 0.46649473170934 0.823357541662757 0.3670998 0.7972809 prediction 0.646715083325515 Functional Gain - WTAP ENSG00000146457 CDS Human protein_coding chr6:160176184 chr6:160176185 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_29026 0 0 1 0 0 chromatin 0.438609892043789 0.438717136403455 0.5945618 0 hPsi_site_22750 iPseU_CNN:0.5945618;iRNA_PseU:0 22751 chr7 142460314 142460314 1 + G A LGG 142460313 + 142460293 142460333 41 GACGAGCTGCAGTGCCTGGATGCTCCTGTGCTGAGCCAGGC GACGAGCTGCAGTGCCTGGATACTCCTGTGCTGAGCCAGGC < 41bp 0.418875272051605 0.823357065797063 0.2119754 0.6183272 prediction 0.646714131594125 Functional Gain - PRSS1 ENSG00000204983 CDS Human protein_coding chr7:142460313 chr7:142460314 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_29027 0 0 0 0 1 Cytosol 0.43885333785629 0.456939006660546 0.2366544 0 hPsi_site_22751 iPseU_CNN:0.2366544;iRNA_PseU:0 22752 chr2 37599863 37599863 1 + G A rs34476437 37599862 + 37599842 37599882 41 CTGATACCGTCTCCTTTCCCTGAAGTCTGGCACACCATGGA CTGATACCGTCTCCTTTCCCTAAAGTCTGGCACACCATGGA < 41bp 0.573322872100126 0.89667723882231 0.23559752 0.2986384 prediction 0.646708733444367 Functional Gain - QPCT ENSG00000115828 CDS Human protein_coding chr2:37599862 chr2:37599863 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29028 0 0 1 0 1 exosome 0.438717426265181 0.438707238917699 0 0 hPsi_site_22752 iPseU_CNN:0;iRNA_PseU:0 22753 chr1 171083178 171083178 1 + G A SKCM 171083177 + 171083157 171083197 41 AAAGAGCCTGTATTTAACGATGAGCTCCCAGCAAGCATTCT AAAGAGCCTGTATTTAACGATAAGCTCCCAGCAAGCATTCT < 41bp 0.409565665727237 0.823352323628375 0.285631 0.4458477 prediction 0.64670464725675 Functional Gain - FMO3 ENSG00000007933 CDS Human protein_coding chr1:171083177 chr1:171083178 nonsynonymous SNV 0.504 3 22 hPsi_associated_SNPs_29029 0 0 0 0 0 exosome 0.438679337921398 0.438718583033547 0 0 hPsi_site_22753 iPseU_CNN:0;iRNA_PseU:0 22754 chr2 176982146 176982146 1 + G A STAD 176982145 + 176982125 176982165 41 GCAGCTCTCCGCTGCCCAGCTGCAGATGGAAAAGAAGATGA GCAGCTCTCCGCTGCCCAGCTACAGATGGAAAAGAAGATGA < 41bp 0.421742829473803 0.82334862182836 0.29582566 0.5803702 prediction 0.64669724365672 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982145 chr2:176982146 synonymous SNV . 0 22 hPsi_associated_SNPs_29030 0 0 1 0 0 exosome 0.438718588029976 0.438690790707329 0.1607404 0 hPsi_site_22754 iPseU_CNN:0.1607404;iRNA_PseU:0 22755 chr2 198570393 198570393 1 + C A UCEC 198570392 + 198570372 198570412 41 CAGCACGGCCGCCACGCGATTCTCCACTGGTACCGACGAGC CAGCACGGCCGCCACGCGATTATCCACTGGTACCGACGAGC < 41bp 0.514149289895853 0.837497403296991 0.26767117 0.5463568 prediction 0.646696226802276 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570392 chr2:198570393 nonsynonymous SNV 0.973 1 22 hPsi_associated_SNPs_29031 0 0 1 0 0 Ribosome 0.438990544239833 0.438677215113504 0.0927136 0 hPsi_site_22755 iPseU_CNN:0.0927136;iRNA_PseU:0 22756 chr9 135553703 135553703 1 + C A UCEC 135553702 + 135553682 135553722 41 AATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTT AATGAGGCCCCGGAAGGAAATATCGGGGATTTTGCTGAGTT < 41bp 0.538880894373865 0.862226878314707 0.5616949 0.63686085 prediction 0.646691967881684 Functional Gain - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135553702 chr9:135553703 nonsynonymous SNV 0.968 2 22 hPsi_associated_SNPs_29032 0 0 1 0 0 Ribosome 0.438708802423858 0.438710375802427 0.1503319 0 hPsi_site_22756 iPseU_CNN:0.1503319;iRNA_PseU:0 22757 chr19 17922500 17922500 1 + G A rs140504053 17922499 + 17922479 17922519 41 TACCTGCAGGACCATGACCCTGGCCGCCACCTCTTCGTGGG TACCTGCAGGACCATGACCCTAGCCGCCACCTCTTCGTGGG < 41bp 0.400009906079236 0.823345725855779 0.15825126 0.2528817 prediction 0.646691451711559 Functional Gain - B3GNT3 ENSG00000179913 CDS Human protein_coding chr19:17922499 chr19:17922500 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_29033 0 0 0 0 0 Ribosome 0.438720481545656 0.438718593008777 0 0 hPsi_site_22757 iPseU_CNN:0;iRNA_PseU:0 22758 chr17 6929794 6929794 1 + G A COAD 6929793 + 6929773 6929813 41 CAGGAAGTGAATTTTTCAGCTGCCAGAACTGTGAGGCTGTG CAGGAAGTGAATTTTTCAGCTACCAGAACTGTGAGGCTGTG < 41bp 0.404844547491801 0.823339560207437 0.3136219 0.4066614 prediction 0.646679120414875 Functional Gain - BCL6B ENSG00000161940 CDS Human protein_coding chr17:6929793 chr17:6929794 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29034 0 0 0 0 1 Endoplasmic reticulum 0.438502847143386 0.440046291474993 0 0 hPsi_site_22758 iPseU_CNN:0;iRNA_PseU:0 22759 chr19 17296788 17296788 1 + G T SARC 17296787 + 17296767 17296807 41 CGGAGCCCTTCTTTATCCGCTGCATCCGTTCCAATGCTGAA CGGAGCCCTTCTTTATCCGCTTCATCCGTTCCAATGCTGAA < 41bp 0.509995395920664 0.8333325863813 0.28059024 0.31039602 prediction 0.646674380921273 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17296787 chr19:17296788 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29035 0 0 1 0 2 Nucleus 0.438982119695966 0.438718537990866 0 0 hPsi_site_22759 iPseU_CNN:0;iRNA_PseU:0 22760 chr11 76826516 76826516 1 + G A LGG 76826515 + 76826495 76826535 41 CACGCATACGCCGTCACTGATGTGCGCAAGGTGCGCCTGGG CACGCATACGCCGTCACTGATATGCGCAAGGTGCGCCTGGG < 41bp 0.395214486141368 0.82333590313402 0.75484306 0.88901126 prediction 0.646671806268041 Functional Gain - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76826515 chr11:76826516 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_29036 0 0 0 0 1 Endoplasmic reticulum 0.438673145764397 0.438656078645679 0.2683364 0 hPsi_site_22760 iPseU_CNN:0.2683364;iRNA_PseU:0 22761 chr16 67912498 67912498 1 + G T COAD 67912497 + 67912477 67912517 41 AGAACCGAGAGTTAAAGATGTGGTGTACAGTATCCTGGACC AGAACCGAGAGTTAAAGATGTTGTGTACAGTATCCTGGACC < 41bp 0.500937095994805 0.824267742606763 0.32718498 0.28789145 prediction 0.646661293223915 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67912497 chr16:67912498 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29037 0 0 1 0 1 Cytosol 0.438714873147869 0.438800560158636 0 0 hPsi_site_22761 iPseU_CNN:0;iRNA_PseU:0 22762 chr15 40998407 40998407 1 + C A BRCA 40998406 + 40998386 40998426 41 TAAATTAGTTCCAATGGGTTTCACCACTGCAACTGAATTCC TAAATTAGTTCCAATGGGTTTAACCACTGCAACTGAATTCC < 41bp 0.480711441925942 0.823327953491675 0.23145202 0.58386 prediction 0.646655906983351 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:40998406 chr15:40998407 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29038 0 0 1 0 2 Cytosol 0.438709233018406 0.438717771062039 0.16772 0 hPsi_site_22762 iPseU_CNN:0.16772;iRNA_PseU:0 22763 chr19 17922701 17922701 1 + G A SKCM 17922700 + 17922680 17922720 41 TTGGACATCTTCCCCATTGATGATGTCTTCCTGGGTATGTG TTGGACATCTTCCCCATTGATAATGTCTTCCTGGGTATGTG < 41bp 0.405867167292258 0.823327767048213 0.21481687 0.2871609 prediction 0.646655534096426 Functional Gain - B3GNT3 ENSG00000179913 CDS Human protein_coding chr19:17922700 chr19:17922701 nonsynonymous SNV 0.164 4 22 hPsi_associated_SNPs_29039 0 0 0 0 0 Ribosome 0.43871859159952 0.438718557095073 0 0 hPsi_site_22763 iPseU_CNN:0;iRNA_PseU:0 22764 chr10 7786863 7786863 1 + G A SKCM 7786862 + 7786842 7786882 41 AAGAAGCATCCCGTCAATGTTGACTTTCTGGGAATCTACAT AAGAAGCATCCCGTCAATGTTAACTTTCTGGGAATCTACAT < 41bp 0.418324167205967 0.823326867944396 0.2878018 0.32522166 prediction 0.646653735888791 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7786862 chr10:7786863 nonsynonymous SNV 0.504 4 22 hPsi_associated_SNPs_29040 0 0 1 0 1 cytosol 0.438681575805741 0.438718320222563 0 0 hPsi_site_22764 iPseU_CNN:0;iRNA_PseU:0 22765 chr19 30934864 30934864 1 + G A UCEC 30934863 + 30934843 30934883 41 GCAAGAACCGCAAGTACCCGTGCCCACTCTGCGGCAAGCGC GCAAGAACCGCAAGTACCCGTACCCACTCTGCGGCAAGCGC < 41bp 0.407776169983335 0.823324724677094 0.5674516 0.91412723 prediction 0.646649449354188 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30934863 chr19:30934864 nonsynonymous SNV 0.931 4 22 hPsi_associated_SNPs_29041 0 0 1 0 0 exosome 0.433617206453603 0.438620230992205 0.69335126 0 hPsi_site_22765 iPseU_CNN:0.69335126;iRNA_PseU:0 22766 chr7 134925438 134925438 1 + G A LUSC 134925437 + 134925417 134925457 41 CAACAACCTCAGGAAGACAGTGTACTCTCAGTCTGATCTCA CAACAACCTCAGGAAGACAGTATACTCTCAGTCTGATCTCA < 41bp 0.405377394506815 0.823323321329687 0.3188619 0.42019874 prediction 0.646646642659374 Functional Gain - STRA8 ENSG00000146857 CDS Human protein_coding chr7:134925437 chr7:134925438 synonymous SNV . 0 22 hPsi_associated_SNPs_29042 0 0 0 0 1 exosome 0.438715592119417 0.438718483097675 0 0 hPsi_site_22766 iPseU_CNN:0;iRNA_PseU:0 22767 chr17 21188081 21188081 1 + C A rs535063710 21188080 + 21188060 21188100 41 TGCTGCAGTCGCCGCCGCAGTCCTCGCCGCAGTCGCCGCCG TGCTGCAGTCGCCGCCGCAGTACTCGCCGCAGTCGCCGCCG < 41bp 0.509155469054021 0.83247711723813 0.3734554 0.9822864 prediction 0.646643296368219 Functional Gain - MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188080 chr17:21188081 . . 0 22 hPsi_associated_SNPs_29043 0 0 1 0 0 Ribosome 0.438739465298148 0.43892668564855 0.9645728 0 hPsi_site_22767 iPseU_CNN:0.9645728;iRNA_PseU:0 22768 chr9 2718654 2718654 1 + G A rs7859993 2718653 + 2718633 2718673 41 GCGGCCCATCCTGGAGCACGTGGAGATGCTGTGCATGGGCT GCGGCCCATCCTGGAGCACGTAGAGATGCTGTGCATGGGCT < 41bp 0.419205573984378 0.82332064585331 0.4179727 0.58149123 prediction 0.64664129170662 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718653 chr9:2718654 synonymous SNV . 0 22 hPsi_associated_SNPs_29044 2 0 0 0 0 insoluble cytoplasm 0.438718291451822 0.438920731604895 0.16298246 0 hPsi_site_22768 iPseU_CNN:0.16298246;iRNA_PseU:0 22769 chr19 50945490 50945490 1 + C A LUAD 50945489 + 50945469 50945509 41 AGTGGACAGAGGCAACAAGATCAAGTTGATGGTAGAGATCA AGTGGACAGAGGCAACAAGATAAAGTTGATGGTAGAGATCA < 41bp 0.461069454534253 0.823320407094658 0.32971388 0.34517267 prediction 0.646640814189316 Functional Gain - MYBPC2 ENSG00000086967 CDS Human protein_coding chr19:50945489 chr19:50945490 synonymous SNV . 0 22 hPsi_associated_SNPs_29045 0 0 0 0 2 exosome 0.43810946521512 0.43913275389055 0 0 hPsi_site_22769 iPseU_CNN:0;iRNA_PseU:0 22770 chr19 2271906 2271906 1 + C A rs532142058 2271905 + 2271885 2271925 41 AGTGCTGAGTGGCGGCAGCCTCTACATCGAGATCCCGGGCG AGTGCTGAGTGGCGGCAGCCTATACATCGAGATCCCGGGCG < 41bp 0.546144955682047 0.869465148247134 0.30046117 0.44072875 prediction 0.646640385130175 Functional Gain - OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271905 chr19:2271906 synonymous SNV . 0 22 hPsi_associated_SNPs_29046 0 0 1 0 1 Ribosome 0.438729616667085 0.438710457569072 0 0 hPsi_site_22770 iPseU_CNN:0;iRNA_PseU:0 22771 chr9 99489597 99489597 1 + G A rs77695561 99489596 + 99489576 99489616 41 CCCCTGTGCTGGTGTGGCAGTGCCTGTGTTCTCTCCTAGGT CCCCTGTGCTGGTGTGGCAGTACCTGTGTTCTCTCCTAGGT < 41bp 0.459147155331331 0.823319284907849 0.27159247 0.74161124 prediction 0.646638569815698 Functional Gain - LOC441455 ENSG00000233820 ncRNA_exonic Human transcribed_processed_pseudogene chr9:99489596 chr9:99489597 . . 0 22 hPsi_associated_SNPs_29047 0 0 0 1 0 unknown 0.439409523853936 0.440103055011102 0.48322248 0 hPsi_site_22771 iPseU_CNN:0.48322248;iRNA_PseU:0 22772 chr1 151039715 151039715 1 + G A GBM 151039714 + 151039694 151039734 41 GGAAGCTATGAGGGACCCTGTGAGTAGCCAGTACAGTTCCT GGAAGCTATGAGGGACCCTGTAAGTAGCCAGTACAGTTCCT < 41bp 0.571103987042398 0.894422182663313 0.53957206 0.79914653 prediction 0.64663639124183 Functional Gain - MLLT11 ENSG00000213190 CDS Human protein_coding chr1:151039714 chr1:151039715 synonymous SNV . 0 22 hPsi_associated_SNPs_29048 0 0 1 0 1 Cytosol 0.438716620437966 0.438717811705691 0.51914894 0 hPsi_site_22772 iPseU_CNN:0.51914894;iRNA_PseU:0 22773 chr8 22273611 22273611 1 + G A STAD 22273610 + 22273590 22273630 41 TGCAGGCTTCCCAGAGTGCTTGCTACTGGCTGAAAGGTGTC TGCAGGCTTCCCAGAGTGCTTACTACTGGCTGAAAGGTGTC < 41bp 0.398841500117286 0.823316185051771 0.14641297 0.34015253 prediction 0.646632370103542 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22273610 chr8:22273611 nonsynonymous SNV 0.974 4 22 hPsi_associated_SNPs_29049 0 0 1 0 1 Endoplasmic reticulum 0.438718808430004 0.43871858995237 0 0 hPsi_site_22773 iPseU_CNN:0;iRNA_PseU:0 22774 chr6 139498128 139498128 1 + C A rs571949782 139498127 + 139498107 139498147 41 GCCGGTGATCGACGTGAGGATCGGGATGCAGTACTTCTCCG GCCGGTGATCGACGTGAGGATAGGGATGCAGTACTTCTCCG < 41bp 0.539475122586251 0.862789181908125 0.41044837 0.6986787 prediction 0.646628118643749 Functional Gain - HECA ENSG00000112406 CDS Human protein_coding chr6:139498127 chr6:139498128 synonymous SNV . 0 22 hPsi_associated_SNPs_29050 0 0 1 0 1 Ribosome 0.438721024372369 0.438720457635629 0.3973574 0 hPsi_site_22774 iPseU_CNN:0.3973574;iRNA_PseU:0 22775 chrX 140984750 140984750 1 + C A COAD 140984749 + 140984729 140984769 41 TCCCCAGGGTCCTCCCAAGATCTCTCCCCAGGGTCCTCCGC TCCCCAGGGTCCTCCCAAGATATCTCCCCAGGGTCCTCCGC < 41bp 0.548060044713209 0.871373788770761 0.32484972 0.49061212 prediction 0.646627488115103 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140984749 chrX:140984750 synonymous SNV . 0 22 hPsi_associated_SNPs_29051 0 0 0 0 1 exosome 0.438718594030405 0.438718592724609 0 0 hPsi_site_22775 iPseU_CNN:0;iRNA_PseU:0 22776 chr11 236811 236811 1 + G A rs519592 236810 + 236790 236830 41 CCACAGGCGCCCACACTCTTTGACGCCTCAATGGCACAGCC CCACAGGCGCCCACACTCTTTAACGCCTCAATGGCACAGCC < 41bp 0.567786121250006 0.891098252050184 0.27021205 0.46665132 prediction 0.646624261600355 Functional Gain - PSMD13 ENSG00000142082;ENSG00000185627 UTR5 Human other chr11:236810 chr11:236811 . . 0 22 hPsi_associated_SNPs_29052 0 0 0 0 0 Ribosome 0.438813599111807 0.438718592995306 0 0 hPsi_site_22776 iPseU_CNN:0;iRNA_PseU:0 22777 chr17 27076177 27076177 1 + G A STAD 27076176 + 27076156 27076196 41 AGGCCAAGCCCAACCTTGAGTGCTTCAGCCCAGCCTTCTAC AGGCCAAGCCCAACCTTGAGTACTTCAGCCCAGCCTTCTAC < 41bp 0.576392941437113 0.899691078840269 0.3436252 0.62961155 prediction 0.646596274806311 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27076176 chr17:27076177 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_29053 0 0 0 0 0 Ribosome 0.438718587174517 0.438718860636387 0.2592231 0 hPsi_site_22777 iPseU_CNN:0.2592231;iRNA_PseU:0 22778 chr13 92002887 92002887 1 + G A STAD 92002886 + 92002866 92002906 41 TAATGTCAAAGTGCTTACAGTGCAGGTAGTGATATGTGCAT TAATGTCAAAGTGCTTACAGTACAGGTAGTGATATGTGCAT < 41bp 0.527644390340306 0.850940587926787 0.15147346 0.29359484 prediction 0.646592395172961 Functional Gain - MIR17;MIR17HG ENSG00000215417 ncRNA_exonic Human processed_transcript chr13:92002886 chr13:92002887 . . 0 22 hPsi_associated_SNPs_29054 0 0 1 0 0 unknown 0.440300717463294 0.439011353872046 0 0 hPsi_site_22778 iPseU_CNN:0;iRNA_PseU:0 22779 chr2 130738132 130738132 1 + G A BLCA 130738131 + 130738111 130738151 41 AGAGAGGAAAGCCAAAGGGCTGAATGTTACGTTTATTGAAA AGAGAGGAAAGCCAAAGGGCTAAATGTTACGTTTATTGAAA < 41bp 0.568804716814005 0.892100382339194 0.1856485 0.3484441 prediction 0.646591331050379 Functional Gain - RAB6C ENSG00000222014 CDS Human protein_coding chr2:130738131 chr2:130738132 synonymous SNV . 0 22 hPsi_associated_SNPs_29055 0 0 0 0 0 exosome 0.439120243342499 0.438716965388806 0 0 hPsi_site_22779 iPseU_CNN:0;iRNA_PseU:0 22780 chr12 7016594 7016594 1 + G A LUSC 7016593 + 7016573 7016613 41 GGGAATCAATCTTCCTAAGCTGAAGAACCTCTACCTGGTAG GGGAATCAATCTTCCTAAGCTAAAGAACCTCTACCTGGTAG < 41bp 0.575718616947281 0.899011533854501 0.3808112 0.6119093 prediction 0.646585833814439 Functional Gain - LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7016593 chr12:7016594 synonymous SNV . 0 22 hPsi_associated_SNPs_29056 0 0 0 0 1 Cytosol 0.4387185631763 0.438717044398318 0.2238186 0 hPsi_site_22780 iPseU_CNN:0.2238186;iRNA_PseU:0 22781 chr7 7636054 7636054 1 + G T LUSC 7636053 + 7636033 7636073 41 CACTTCCTCGATGTGCGCTTTGTCTCATTAATATGGGAACA CACTTCCTCGATGTGCGCTTTTTCTCATTAATATGGGAACA < 41bp 0.506970183715308 0.830261601518799 0.25448233 0.2720003 prediction 0.646582835606981 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7636053 chr7:7636054 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29057 0 0 1 0 1 Nucleus 0.438775429560212 0.438457003409901 0 0 hPsi_site_22781 iPseU_CNN:0;iRNA_PseU:0 22782 chr17 38340522 38340522 1 + G A UCEC 38340521 + 38340501 38340541 41 GGCTGGGCCGGAAGCAAGCCTGTCTAGCCATGCTTCTCCAT GGCTGGGCCGGAAGCAAGCCTATCTAGCCATGCTTCTCCAT < 41bp 0.582659214983678 0.905950283124287 0.45087516 0.6623659 prediction 0.646582136281217 Functional Gain - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38340521 chr17:38340522 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_29058 0 0 1 0 2 chromatin 0.438718593482558 0.438718592954155 0.3247318 0 hPsi_site_22782 iPseU_CNN:0.3247318;iRNA_PseU:0 22783 chr11 4471455 4471455 1 + G A LUSC 4471454 + 4471434 4471474 41 GTCAATCCCATAATCTATGGTGTCAAGACCAAGCAAATCCG GTCAATCCCATAATCTATGGTATCAAGACCAAGCAAATCCG < 41bp 0.556402540980153 0.879692007482049 0.34200877 0.72271943 prediction 0.646578933003793 Functional Gain - OR52K2 ENSG00000181963 CDS Human protein_coding chr11:4471454 chr11:4471455 nonsynonymous SNV 0.989 0 22 hPsi_associated_SNPs_29059 0 0 0 0 0 exosome 0.437160940078783 0.438654932870245 0.44543886 0 hPsi_site_22783 iPseU_CNN:0.44543886;iRNA_PseU:0 22784 chr17 55055498 55055498 1 + G A BLCA 55055497 + 55055477 55055517 41 CGCCGGGTCCAGCCTGTTGCTGATGCTGCCGTGCGGTACTT CGCCGGGTCCAGCCTGTTGCTAATGCTGCCGTGCGGTACTT < 41bp 0.44949018640789 0.823288184318821 0.20436874 0.51388454 prediction 0.646576368637642 Functional Gain - SCPEP1 ENSG00000121064 UTR5 Human protein_coding chr17:55055497 chr17:55055498 . . 0 22 hPsi_associated_SNPs_29060 0 0 0 0 1 Ribosome 0.43872027618182 0.438718600176175 0.0277690799999999 0 hPsi_site_22784 iPseU_CNN:0.0277690799999999;iRNA_PseU:0 22785 chr12 97051808 97051808 1 + C A GBM 97051807 + 97051787 97051827 41 TCCACGACTTTGTATTAAAATCTCTGGAAGTTTTATATCAA TCCACGACTTTGTATTAAAATATCTGGAAGTTTTATATCAA < 41bp 0.495312507830449 0.823282227512184 0.36929387 0.3357271 prediction 0.646564455024367 Functional Gain - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:97051807 chr12:97051808 nonsynonymous SNV 0.977 2 22 hPsi_associated_SNPs_29061 0 0 0 0 1 exosome 0.438718670710039 0.438718589316472 0 0 hPsi_site_22785 iPseU_CNN:0;iRNA_PseU:0 22786 chr9 34514703 34514703 1 + C A LGG 34514702 + 34514682 34514722 41 TGGCCTGGGCGCCATACTCTTCTACTGTGTTCGCAGCAGTC TGGCCTGGGCGCCATACTCTTATACTGTGTTCGCAGCAGTC < 41bp 0.44848069941472 0.823281231809598 0.5413686 0.55256194 prediction 0.646562463619197 Functional Gain - DNAI1 ENSG00000122735 CDS Human protein_coding chr9:34514702 chr9:34514703 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29062 0 0 0 0 2 unknown 0.439512747119846 0.438469806794208 0.0223866800000001 0 hPsi_site_22786 iPseU_CNN:0.0223866800000001;iRNA_PseU:0 22787 chr1 228033702 228033702 1 + G A rs564039124 228033701 + 228033681 228033721 41 TGAATTCAACCGCAGCTGGTTGCAGATTGGAATTGTGAGCT TGAATTCAACCGCAGCTGGTTACAGATTGGAATTGTGAGCT < 41bp 0.575090149782272 0.898370239927507 0.15026638 0.4492597 prediction 0.646560180290469 Functional Gain - PRSS38 ENSG00000185888 CDS Human protein_coding chr1:228033701 chr1:228033702 synonymous SNV . 0 22 hPsi_associated_SNPs_29063 0 0 0 0 1 unknown 0.444220687201084 0.441687912446252 0 0 hPsi_site_22787 iPseU_CNN:0;iRNA_PseU:0 22788 chr7 44806089 44806089 1 + G A rs71548246 44806088 + 44806068 44806108 41 GGACTACACACCTCCAACCTTGGGGCCCCTCCAGGTCCCCA GGACTACACACCTCCAACCTTAGGGCCCCTCCAGGTCCCCA < 41bp 0.406979613535624 0.823266845927685 0.2692209 0.54928607 prediction 0.64653369185537 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806088 chr7:44806089 nonsynonymous SNV 0.307 2 22 hPsi_associated_SNPs_29064 0 0 1 0 1 Cytosol 0.43871859299601 0.438718606876959 0.0985721399999999 0 hPsi_site_22788 iPseU_CNN:0.0985721399999999;iRNA_PseU:0 22789 chr6 41011821 41011821 1 + G A UCEC 41011820 + 41011800 41011840 41 CAGCCCTCACCTACCACCTGTGGAGGGACAGCCTTTGTCCA CAGCCCTCACCTACCACCTGTAGAGGGACAGCCTTTGTCCA < 41bp 0.580786098513382 0.904052472830097 0.29521358 0.5332144 prediction 0.646532748633428 Functional Gain - TSPO2 ENSG00000112212 CDS Human protein_coding chr6:41011820 chr6:41011821 stopgain 0.998 1 22 hPsi_associated_SNPs_29065 0 0 0 0 0 exosome 0.438737144888848 0.438714156011382 0.0664288 0 hPsi_site_22789 iPseU_CNN:0.0664288;iRNA_PseU:0 22790 chr3 99509692 99509692 1 + C A LUSC 99509691 + 99509671 99509711 41 CCACAATACCAGCCCCTGGGTCAGCAAGTACCTCACATGCC CCACAATACCAGCCCCTGGGTAAGCAAGTACCTCACATGCC < 41bp 0.548400280988477 0.87166560972105 0.26582348 0.5781482 prediction 0.646530657465147 Functional Gain - COL8A1 ENSG00000144810 CDS Human protein_coding chr3:99509691 chr3:99509692 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29066 0 0 0 0 0 Cytosol 0.438718751930672 0.438888562933618 0.1562964 0 hPsi_site_22790 iPseU_CNN:0.1562964;iRNA_PseU:0 22791 chr3 160395489 160395489 1 + G A COAD 160395488 + 160395468 160395508 41 CACATTAAAAATGTGCCTGTTGTTCTATTAGCCAACAAACA CACATTAAAAATGTGCCTGTTATTCTATTAGCCAACAAACA < 41bp 0.462146997585898 0.823252227592781 0.5055033 0.61058944 prediction 0.646504455185562 Functional Gain - ARL14 ENSG00000179674 CDS Human protein_coding chr3:160395488 chr3:160395489 nonsynonymous SNV 0.041 0 22 hPsi_associated_SNPs_29067 0 0 0 0 0 exosome 0.438718621569941 0.438718586524809 0.21017228 0 hPsi_site_22791 iPseU_CNN:0.21017228;iRNA_PseU:0 22792 chr17 31323880 31323880 1 + C A UCEC 31323879 + 31323859 31323899 41 AGGGGTCTGCCTTGCTTATTTCACAAGCGGTTTCAACGCAG AGGGGTCTGCCTTGCTTATTTAACAAGCGGTTTCAACGCAG < 41bp 0.543072486339788 0.866318258262445 0.27913937 0.35249543 prediction 0.646491543845315 Functional Gain - SPACA3 ENSG00000141316 CDS Human protein_coding chr17:31323879 chr17:31323880 nonsynonymous SNV 0.877 1 22 hPsi_associated_SNPs_29068 0 0 0 0 2 unknown 0.438612926378528 0.438986774660958 0 0 hPsi_site_22792 iPseU_CNN:0;iRNA_PseU:0 22793 chr2 233324531 233324531 1 + G A rs113958279 233324530 + 233324510 233324550 41 CCAAGTCACAGCCACTCAGATGCTTCCTGCCCCCCAGTGCC CCAAGTCACAGCCACTCAGATACTTCCTGCCCCCCAGTGCC < 41bp 0.510544620402058 0.833786396644749 0.31264707 0.6999906 prediction 0.646483552485383 Functional Gain - ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324530 chr2:233324531 . . 0 22 hPsi_associated_SNPs_29069 0 0 1 0 0 Cytosol 0.438718559521307 0.438718592074665 0.3999812 0 hPsi_site_22793 iPseU_CNN:0.3999812;iRNA_PseU:0 22794 chr12 57610785 57610785 1 + C A UCEC 57610784 + 57610764 57610804 41 CCCGGAATGGTTCCTCTTGCTCTTTGGCCCGTGGCTCCTTA CCCGGAATGGTTCCTCTTGCTATTTGGCCCGTGGCTCCTTA < 41bp 0.510517823243229 0.833758928550901 0.3597563 0.58410287 prediction 0.646482210615344 Functional Gain - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57610784 chr12:57610785 synonymous SNV . 0 22 hPsi_associated_SNPs_29070 0 0 0 0 1 exosome 0.438716916597506 0.43871863598113 0.16820574 0 hPsi_site_22794 iPseU_CNN:0.16820574;iRNA_PseU:0 22795 chr2 131521484 131521484 1 + C A COAD 131521483 + 131521463 131521503 41 AGGTCACTCTGAAGGCTTGTTCTCCTCTATGGAGTCTGCAG AGGTCACTCTGAAGGCTTGTTATCCTCTATGGAGTCTGCAG < 41bp 0.474224147262765 0.823232807892937 0.30477625 0.30387792 prediction 0.646465615785875 Functional Gain - AMER3 ENSG00000178171 CDS Human protein_coding chr2:131521483 chr2:131521484 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_29071 0 0 0 0 0 Nucleus 0.439086035305484 0.438737627941004 0 0 hPsi_site_22795 iPseU_CNN:0;iRNA_PseU:0 22796 chr6 132892124 132892124 1 + C A UCEC 132892123 + 132892103 132892143 41 ATTCTGTATGGTAACATATTTCTTGTGGCTAGACGACAGGC ATTCTGTATGGTAACATATTTATTGTGGCTAGACGACAGGC < 41bp 0.491498217327108 0.823230536219521 0.30171013 0.29877496 prediction 0.646461072439042 Functional Gain - TAAR6 ENSG00000146383 CDS Human protein_coding chr6:132892123 chr6:132892124 nonsynonymous SNV 0.015 0 22 hPsi_associated_SNPs_29072 0 0 0 0 0 unknown 0.43871728022016 0.439050399850601 0 0 hPsi_site_22796 iPseU_CNN:0;iRNA_PseU:0 22797 chr1 43772903 43772903 1 + G A UCEC 43772902 + 43772882 43772922 41 GCCACGACCATGACGGCGAATGTGTATGCCCCCCTGGCTTC GCCACGACCATGACGGCGAATATGTATGCCCCCCTGGCTTC < 41bp 0.411640063582456 0.823217920749913 0.32371372 0.46731862 prediction 0.646435841499827 Functional Gain - TIE1 ENSG00000066056 CDS Human protein_coding chr1:43772902 chr1:43772903 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_29073 0 0 0 0 0 Cytosol 0.438799475217315 0.438748294846551 0 0 hPsi_site_22797 iPseU_CNN:0;iRNA_PseU:0 22798 chr6 26545621 26545621 1 + G A rs115040324 26545620 + 26545600 26545640 41 AGAAAGGGGAAAGCAGATGCTGGAAAGGATGGGAACAACCC AGAAAGGGGAAAGCAGATGCTAGAAAGGATGGGAACAACCC < 41bp 0.57185450261873 0.895069272830036 0.1483069 0.18053353 prediction 0.646429540422612 Functional Gain - HMGN4 ENSG00000182952 CDS Human protein_coding chr6:26545620 chr6:26545621 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_29074 0 0 1 0 0 Cytosol 0.438718593026292 0.438718592867596 0 0 hPsi_site_22798 iPseU_CNN:0;iRNA_PseU:0 22799 chr1 45162805 45162805 1 + C A UCEC 45162804 + 45162784 45162824 41 GACTCATGTTTAGAAAAGCTTCTCAGGTCCATTGGCATCTT GACTCATGTTTAGAAAAGCTTATCAGGTCCATTGGCATCTT < 41bp 0.540471527670231 0.863684500866749 0.63833946 0.5626333 prediction 0.646425946393036 Functional Gain - C1orf228 ENSG00000198520 CDS Human protein_coding chr1:45162804 chr1:45162805 nonsynonymous SNV 0.865 3 22 hPsi_associated_SNPs_29075 0 0 0 0 2 chromatin 0.438693382017012 0.438718580128049 0 0 hPsi_site_22799 iPseU_CNN:0;iRNA_PseU:0 22800 chr1 3683150 3683150 1 + G A SKCM 3683149 + 3683129 3683169 41 CAAGAGATGATGGGGCTCATTGAAAAGGACAACCAGCTCCT CAAGAGATGATGGGGCTCATTAAAAAGGACAACCAGCTCCT < 41bp 0.415261833696648 0.823207340695679 0.34589332 0.42281792 prediction 0.646414681391357 Functional Gain - CCDC27 ENSG00000162592 CDS Human protein_coding chr1:3683149 chr1:3683150 nonsynonymous SNV 0.890 4 22 hPsi_associated_SNPs_29076 0 0 0 0 2 exosome 0.440466029126091 0.438578413670688 0 0 hPsi_site_22800 iPseU_CNN:0;iRNA_PseU:0 22801 chr9 34582599 34582599 1 + G A rs115329630 34582598 + 34582578 34582618 41 ACCATGAGAAAGGGATTCCATGTCTTCCAATCCTGCCCAGA ACCATGAGAAAGGGATTCCATATCTTCCAATCCTGCCCAGA < 41bp 0.449791068276186 0.823207149698346 0.2744422 0.4531969 prediction 0.646414299396692 Functional Gain - CNTFR-AS1 ENSG00000237159 ncRNA_exonic Human antisense chr9:34582598 chr9:34582599 . . 0 22 hPsi_associated_SNPs_29077 0 0 0 2 0 unknown 0.438632017205936 0.438631230975223 0 0 hPsi_site_22801 iPseU_CNN:0;iRNA_PseU:0 22802 chr7 107398834 107398834 1 + G A LUSC 107398833 + 107398813 107398853 41 GCCACCAGACAAGCACCATATGAGCCATATTCCGCCAAAGC GCCACCAGACAAGCACCATATAAGCCATATTCCGCCAAAGC < 41bp 0.416224406209036 0.823203163935788 0.2712533 0.58663255 prediction 0.646406327871576 Functional Gain - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107398833 chr7:107398834 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29078 0 0 1 0 0 cytosol 0.438715680032776 0.438598588816995 0.1732651 0 hPsi_site_22802 iPseU_CNN:0.1732651;iRNA_PseU:0 22803 chr1 35836039 35836039 1 + C A KIRC 35836038 + 35836018 35836058 41 GCATGAATAAAATGCTTCCTTCAGTTCCAGCCACAGCTGTT GCATGAATAAAATGCTTCCTTAAGTTCCAGCCACAGCTGTT < 41bp 0.529897406121395 0.853097327800375 0.5005835 0.8011974 prediction 0.64639984335796 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35836038 chr1:35836039 stopgain 1.000 0 22 hPsi_associated_SNPs_29079 0 0 1 0 1 Cytosol 0.437184055955381 0.438775265058361 0.6012278 0 hPsi_site_22803 iPseU_CNN:0.6012278;iRNA_PseU:0 22804 chr3 183975374 183975374 1 + G T LUAD 183975373 + 183975353 183975393 41 ATGCAGGCTCGCCATGCCCATGTGCCGCAGCTGCGCTGGGA ATGCAGGCTCGCCATGCCCATTTGCCGCAGCTGCGCTGGGA < 41bp 0.497905732034562 0.823193836259607 0.30422154 0.6391083 prediction 0.646387672519213 Functional Gain - ECE2 ENSG00000145194 CDS Human protein_coding chr3:183975373 chr3:183975374 nonsynonymous SNV 0.754 0 22 hPsi_associated_SNPs_29080 0 0 1 0 0 Ribosome 0.438761754560757 0.438718934369899 0.2782166 0 hPsi_site_22804 iPseU_CNN:0.2782166;iRNA_PseU:0 22805 chr2 233245165 233245165 1 + G A LUSC 233245164 + 233245144 233245184 41 GTGGAACCGCACTGAGCTCATGCAGGCTTCCCTGGACCCGT GTGGAACCGCACTGAGCTCATACAGGCTTCCCTGGACCCGT < 41bp 0.40242187783222 0.823181733328365 0.2149823 0.28701538 prediction 0.646363466656731 Functional Gain - ALPP ENSG00000163283 CDS Human protein_coding chr2:233245164 chr2:233245165 nonsynonymous SNV 0.580 1 22 hPsi_associated_SNPs_29081 0 0 1 0 1 Endoplasmic reticulum 0.438718593049874 0.438718599319098 0 0 hPsi_site_22805 iPseU_CNN:0;iRNA_PseU:0 22806 chr15 74177423 74177423 1 + C A LUSC 74177422 + 74177402 74177442 41 CCACGAGACCTTCTGGCTTTTCCAGTTCTTCCTGCAGAAAA CCACGAGACCTTCTGGCTTTTACAGTTCTTCCTGCAGAAAA < 41bp 0.550787917745518 0.873968572656497 0.32868862 0.6366271 prediction 0.646361309821958 Functional Gain - TBC1D21 ENSG00000167139 CDS Human protein_coding chr15:74177422 chr15:74177423 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29082 0 0 0 0 1 exosome 0.438718592995102 0.438718592994831 0.2732542 0 hPsi_site_22806 iPseU_CNN:0.2732542;iRNA_PseU:0 22807 chr6 26272885 26272885 1 + G A rs564836907 26272884 + 26272864 26272904 41 ATATTCGGCAAAGTAGACTGTGCTATCTCCTGAACACAGAT ATATTCGGCAAAGTAGACTGTACTATCTCCTGAACACAGAT < 41bp 0.452320619760295 0.823174559138091 0.36141524 0.52648556 prediction 0.646349118276181 Functional Gain - HIST1H2BI ENSG00000168242;ENSG00000218690 upstream Human other chr6:26272884 chr6:26272885 . . 0 22 hPsi_associated_SNPs_29083 0 0 0 0 0 exosome 0.438827474184221 0.439390049597937 0.05297112 0 hPsi_site_22807 iPseU_CNN:0.05297112;iRNA_PseU:0 22808 chr1 46497895 46497895 1 + C A UCEC 46497894 + 46497874 46497914 41 CCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCA CCAGCCCCATGTCCCCACATTATCAGTCGTCCAACCCATCA < 41bp 0.453585413460499 0.823172100331572 0.18589658 0.24524349 prediction 0.646344200663144 Functional Gain - MAST2 ENSG00000086015 CDS Human protein_coding chr1:46497894 chr1:46497895 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29084 0 0 1 0 1 Ribosome 0.441224433951848 0.437980578801194 0 0 hPsi_site_22808 iPseU_CNN:0;iRNA_PseU:0 22809 chr1 12820863 12820863 1 + G A LUAD 12820862 + 12820842 12820882 41 CCCGGTCCCTCCCCATCGCCTGCATCCTTTCCCACACTTCT CCCGGTCCCTCCCCATCGCCTACATCCTTTCCCACACTTCT < 41bp 0.422536330307747 0.823163081827358 0.62846756 0.7433623 prediction 0.646326163654716 Functional Gain - C1orf158 ENSG00000157330 CDS Human protein_coding chr1:12820862 chr1:12820863 synonymous SNV . 0 22 hPsi_associated_SNPs_29085 0 0 0 0 0 Cytosol 0.43871859140419 0.438718595123558 0.22978948 0 hPsi_site_22809 iPseU_CNN:0.22978948;iRNA_PseU:0 22810 chr7 24720062 24720062 1 + G T SARC 24720061 + 24720041 24720081 41 ATGCCCTATGTGGTATTTATTGCGGCTCCGGAGCTAGAGAC ATGCCCTATGTGGTATTTATTTCGGCTCCGGAGCTAGAGAC < 41bp 0.485202221682213 0.823158787689795 0.58145666 0.88748926 prediction 0.64631757537959 Functional Gain - MPP6 ENSG00000105926 CDS Human protein_coding chr7:24720061 chr7:24720062 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29086 0 0 1 0 2 Cytosol 0.43868228472449 0.438457792046776 0.6120652 0 hPsi_site_22810 iPseU_CNN:0.6120652;iRNA_PseU:0 22811 chr16 84778274 84778274 1 + G A BLCA 84778273 + 84778253 84778293 41 AGAATTGAGTTTGGTGTCGATGAAGTCATTGAACCCAGTGA AGAATTGAGTTTGGTGTCGATAAAGTCATTGAACCCAGTGA < 41bp 0.434307755075775 0.823156665585927 0.325616 0.39947408 prediction 0.646313331171854 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778273 chr16:84778274 nonsynonymous SNV 0.335 1 22 hPsi_associated_SNPs_29087 0 0 1 0 1 Cytosol 0.438713513505241 0.438718595238146 0 0 hPsi_site_22811 iPseU_CNN:0;iRNA_PseU:0 22812 chr15 28901118 28901118 1 + G A UCEC 28901117 + 28901097 28901137 41 CCTGAAGGGCAAAATCACCGTGCAGTTCTCTGACATGCGGA CCTGAAGGGCAAAATCACCGTACAGTTCTCTGACATGCGGA < 41bp 0.417391990611334 0.823150744624954 0.4562301 0.79781324 prediction 0.646301489249909 Functional Gain - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901117 chr15:28901118 . . 0 22 hPsi_associated_SNPs_29088 0 0 0 2 1 unknown 0.438573623958966 0.438682481662053 0.59562648 0 hPsi_site_22812 iPseU_CNN:0.59562648;iRNA_PseU:0 22813 chr1 76365322 76365322 1 + G A rs115082831 76365321 + 76365301 76365341 41 AGGATTAAAAGCTGCAGAGGTGTCATCACTTCCACCATCAA AGGATTAAAAGCTGCAGAGGTATCATCACTTCCACCATCAA < 41bp 0.565370787391349 0.888520318323363 0.3020401 0.67047954 prediction 0.646299061864029 Functional Gain - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76365321 chr1:76365322 synonymous SNV . 0 22 hPsi_associated_SNPs_29089 0 0 0 0 2 exosome 0.438876507447267 0.438639020184769 0.34095908 0 hPsi_site_22813 iPseU_CNN:0.34095908;iRNA_PseU:0 22814 chr21 18933112 18933112 1 + C A BLCA 18933111 + 18933091 18933131 41 AGAAACAGAGTGGGCTCTGATCAGTGCCTGTTGCGTCTAAA AGAAACAGAGTGGGCTCTGATAAGTGCCTGTTGCGTCTAAA < 41bp 0.470683526067138 0.82314874261234 0.55233544 0.63104784 prediction 0.64629748522468 Functional Gain - CXADR ENSG00000154639 CDS Human protein_coding chr21:18933111 chr21:18933112 nonsynonymous SNV 0.963 1 22 hPsi_associated_SNPs_29090 0 0 1 0 2 Ribosome 0.442173787681121 0.439240826585001 0.1574248 0 hPsi_site_22814 iPseU_CNN:0.1574248;iRNA_PseU:0 22815 chr11 111582964 111582964 1 + G A rs148704266 111582963 + 111582943 111582983 41 TGTGGGGCTCCCAGTGACCATGCATTCACCGAACATGAGGC TGTGGGGCTCCCAGTGACCATACATTCACCGAACATGAGGC < 41bp 0.398678188404777 0.823148686030239 0.27118957 0.591292 prediction 0.646297372060479 Functional Gain - SIK2 ENSG00000170145 CDS Human protein_coding chr11:111582963 chr11:111582964 nonsynonymous SNV 0.814 0 22 hPsi_associated_SNPs_29091 0 0 0 0 1 Cytosol 0.438346661074517 0.438664427777074 0.182584 0 hPsi_site_22815 iPseU_CNN:0.182584;iRNA_PseU:0 22816 chr17 5998505 5998505 1 + G A LUAD 5998504 + 5998484 5998524 41 AGCTCCCTGATACAGGCCAATGTGACCGTGGGGACTTGCTC AGCTCCCTGATACAGGCCAATATGACCGTGGGGACTTGCTC < 41bp 0.400650979185502 0.823141868253301 0.18127313 0.25821915 prediction 0.646283736506602 Functional Gain - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:5998504 chr17:5998505 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_29092 0 0 1 0 2 exosome 0.438720582511704 0.438718611830538 0 0 hPsi_site_22816 iPseU_CNN:0;iRNA_PseU:0 22817 chr14 100375697 100375697 1 + G T LUSC 100375696 + 100375676 100375716 41 CTATAGTGCTCTAATGAAGCTGTGTTTGCTGCGGATTTCCA CTATAGTGCTCTAATGAAGCTTTGTTTGCTGCGGATTTCCA < 41bp 0.505497453144169 0.828633935418138 0.41443193 0.59516776 prediction 0.646272964547937 Functional Gain - EML1 ENSG00000066629 CDS Human protein_coding chr14:100375696 chr14:100375697 nonsynonymous SNV 0.518 4 22 hPsi_associated_SNPs_29093 0 0 0 0 1 Nucleus 0.439762940669722 0.421512855705165 0.19033552 0 hPsi_site_22817 iPseU_CNN:0.19033552;iRNA_PseU:0 22818 chr9 116276808 116276808 1 + G A UCEC 116276807 + 116276787 116276827 41 GTCCCGGCTGATGAAGACAGTGCAGACCATGAAGGGCCACG GTCCCGGCTGATGAAGACAGTACAGACCATGAAGGGCCACG < 41bp 0.421374961771991 0.823135605356752 0.3155191 0.43956548 prediction 0.646271210713504 Functional Gain - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116276807 chr9:116276808 synonymous SNV . 0 22 hPsi_associated_SNPs_29094 0 0 1 0 1 Nucleus 0.438786141172837 0.438498843325538 0 0 hPsi_site_22818 iPseU_CNN:0;iRNA_PseU:0 22819 chr2 168725564 168725564 1 + C A COAD 168725563 + 168725543 168725583 41 CAAGACAATGGCTTCAAAGGTCTCCTGTTTGTATGTTTTGA CAAGACAATGGCTTCAAAGGTATCCTGTTTGTATGTTTTGA < 41bp 0.481377540460578 0.823134419919717 0.34363085 0.56415313 prediction 0.646268839839435 Functional Gain - B3GALT1 ENSG00000172318 CDS Human protein_coding chr2:168725563 chr2:168725564 synonymous SNV . 0 22 hPsi_associated_SNPs_29095 0 0 0 0 0 chromatin 0.438715221974327 0.438718596685894 0.12830626 0 hPsi_site_22819 iPseU_CNN:0.12830626;iRNA_PseU:0 22820 chr21 37783774 37783774 1 + G T LUSC 37783773 + 37783753 37783793 41 ACCCCCAGGTGTGGAGCTGATGAGTCTGCCCTACCGCCTGG ACCCCCAGGTGTGGAGCTGATTAGTCTGCCCTACCGCCTGG < 41bp 0.509996126110938 0.833127176998016 0.25321615 0.3173905 prediction 0.646262101774156 Functional Gain - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37783773 chr21:37783774 nonsynonymous SNV 0.397 0 22 hPsi_associated_SNPs_29096 0 0 1 0 1 Ribosome 0.438718607289478 0.438718483829618 0 0 hPsi_site_22820 iPseU_CNN:0;iRNA_PseU:0 22821 chr4 110606443 110606443 1 + C A UCEC 110606442 + 110606422 110606462 41 GCTGTTAAGAGTAGGCAATTTCTTCAGTTCTTCCACAAGAA GCTGTTAAGAGTAGGCAATTTATTCAGTTCTTCCACAAGAA < 41bp 0.507165105822239 0.830291496004409 0.30779994 0.33869147 prediction 0.646252780364339 Functional Gain - MCUB ENSG00000005059 CDS Human protein_coding chr4:110606442 chr4:110606443 nonsynonymous SNV 0.820 4 22 hPsi_associated_SNPs_29097 0 0 1 0 2 unknown 0.438721315034127 0.438689479698124 0 0 hPsi_site_22821 iPseU_CNN:0;iRNA_PseU:0 22822 chr1 100154467 100154467 1 + G A rs6678252 100154466 + 100154446 100154486 41 TGATGATGGGCAAAAGTCAGTGTATGCAGTAAGTTCTAATC TGATGATGGGCAAAAGTCAGTATATGCAGTAAGTTCTAATC < 41bp 0.425049160954276 0.823122633022269 0.3577771 0.40153354 prediction 0.646245266044538 Functional Gain - PALMD ENSG00000099260 CDS Human protein_coding chr1:100154466 chr1:100154467 synonymous SNV . 0 22 hPsi_associated_SNPs_29098 0 0 0 0 0 Cytosol 0.438719284606056 0.438718597124915 0 0 hPsi_site_22822 iPseU_CNN:0;iRNA_PseU:0 22823 chr15 91430451 91430451 1 + G A STAD 91430450 + 91430430 91430470 41 CAAGGCTAAGGACAAGTATGTGCGCAGCCTGTGGAAGCTCT CAAGGCTAAGGACAAGTATGTACGCAGCCTGTGGAAGCTCT < 41bp 0.401888733984967 0.823121778193268 0.42795914 0.81765866 prediction 0.646243556386537 Functional Gain - FES ENSG00000182511 CDS Human protein_coding chr15:91430450 chr15:91430451 synonymous SNV . 0 22 hPsi_associated_SNPs_29099 0 0 0 0 1 cytosol 0.438739423277174 0.439049520291283 0.63531732 0 hPsi_site_22823 iPseU_CNN:0.63531732;iRNA_PseU:0 22824 chr5 170232800 170232800 1 + G A UCEC 170232799 + 170232779 170232819 41 GGACTGGAACACCTGCGGCTTGCTCAGTACACCATAGAGCG GGACTGGAACACCTGCGGCTTACTCAGTACACCATAGAGCG < 41bp 0.410759110625638 0.823116848063847 0.20258671 0.7747678 prediction 0.646233696127694 Functional Gain - GABRP ENSG00000094755 CDS Human protein_coding chr5:170232799 chr5:170232800 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29100 0 0 0 0 2 Cytosol 0.43871859302759 0.438718590433242 0.5495356 0 hPsi_site_22824 iPseU_CNN:0.5495356;iRNA_PseU:0 22825 chr1 160786632 160786632 1 + C A UCEC 160786631 + 160786611 160786651 41 AGCAGGAGTTCCCACCAGTTTCTTTCTGAGAACATCTGTTC AGCAGGAGTTCCCACCAGTTTATTTCTGAGAACATCTGTTC < 41bp 0.456890544668827 0.823116047814228 0.44654167 0.4489621 prediction 0.646232095628457 Functional Gain - LY9 ENSG00000122224 CDS Human protein_coding chr1:160786631 chr1:160786632 nonsynonymous SNV 0.107 0 22 hPsi_associated_SNPs_29101 0 0 0 0 1 exosome 0.438718597913754 0.438718592993822 0 0 hPsi_site_22825 iPseU_CNN:0;iRNA_PseU:0 22826 chr14 74823665 74823665 1 + C A LUAD 74823664 + 74823644 74823684 41 TCCAGGTGCTGGAAGTGGACTCGGTGGCCCTGAGCCTGTAT TCCAGGTGCTGGAAGTGGACTAGGTGGCCCTGAGCCTGTAT < 41bp 0.46510144394756 0.823116016162826 0.3010874 0.5945015 prediction 0.646232032325652 Functional Gain - VRTN ENSG00000133980 CDS Human protein_coding chr14:74823664 chr14:74823665 stopgain 0.987 0 22 hPsi_associated_SNPs_29102 0 0 0 0 0 unknown 0.438717677831111 0.438707690856838 0.189003 0 hPsi_site_22826 iPseU_CNN:0.189003;iRNA_PseU:0 22827 chr10 97697941 97697941 1 + C A COAD 97697940 + 97697920 97697960 41 ATATTTTTGTACCAAGTAGTTCTCCAGGTAACATTCTTTCC ATATTTTTGTACCAAGTAGTTATCCAGGTAACATTCTTTCC < 41bp 0.506598246613185 0.829714040742598 0.24540591 0.3806247 prediction 0.646231588258826 Functional Gain - CC2D2B ENSG00000173088 CDS Human other chr10:97697940 chr10:97697941 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29103 0 0 0 0 0 chromatin 0.438718764537657 0.438718592995005 0 0 hPsi_site_22827 iPseU_CNN:0;iRNA_PseU:0 22828 chr15 85488371 85488371 1 + C A KIRC 85488370 + 85488350 85488390 41 TTTTAGCGTCAATCCAGAGTTCAGCCCAGAGGCCCTGGACA TTTTAGCGTCAATCCAGAGTTAAGCCCAGAGGCCCTGGACA < 41bp 0.529824726255467 0.852938074488674 0.2782957 0.6021864 prediction 0.646226696466414 Functional Gain - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85488370 chr15:85488371 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_29104 0 0 0 0 0 Endoplasmic reticulum 0.438720074916075 0.438717827616972 0.2043728 0 hPsi_site_22828 iPseU_CNN:0.2043728;iRNA_PseU:0 22829 chr5 76028303 76028303 1 + C A BRCA 76028302 + 76028282 76028322 41 AGTCCTCTTCAAAAACAACTTCCTGCATTCATCTCAGAAGA AGTCCTCTTCAAAAACAACTTACTGCATTCATCTCAGAAGA < 41bp 0.511383715294324 0.834495196645396 0.21342888 0.24157614 prediction 0.646222962702145 Functional Gain - F2R ENSG00000181104 CDS Human protein_coding chr5:76028302 chr5:76028303 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_29105 0 0 1 0 0 Endoplasmic reticulum 0.438718549793853 0.438807576367164 0 0 hPsi_site_22829 iPseU_CNN:0;iRNA_PseU:0 22830 chr16 72046004 72046004 1 + C A HNSC 72046003 + 72045983 72046023 41 GAGGAGGACTTCTCTTCGCCTCCTACCTGATGGCCACGGGA GAGGAGGACTTCTCTTCGCCTACTACCTGATGGCCACGGGA < 41bp 0.550585121645986 0.873694880430257 0.12328535 0.24169266 prediction 0.646219517568542 Functional Gain - DHODH ENSG00000102967 CDS Human protein_coding chr16:72046003 chr16:72046004 nonsynonymous SNV 0.903 3 22 hPsi_associated_SNPs_29106 0 0 1 0 1 Endoplasmic reticulum 0.43872116695336 0.438663810394806 0 0 hPsi_site_22830 iPseU_CNN:0;iRNA_PseU:0 22831 chr16 31277420 31277420 1 + G A SARC 31277419 + 31277399 31277439 41 AAAGGGCTCTGCTTCCTGTTTGGATCCAACCTACGGCAGCA AAAGGGCTCTGCTTCCTGTTTAGATCCAACCTACGGCAGCA < 41bp 0.584454330867202 0.907563681542983 0.68813086 0.9359874 prediction 0.646218701351562 Functional Gain - ITGAM ENSG00000169896 CDS Human protein_coding chr16:31277419 chr16:31277420 nonsynonymous SNV 0.009 2 22 hPsi_associated_SNPs_29107 0 0 0 0 2 Endoplasmic reticulum 0.438718592993996 0.438718592994899 0.49571308 0 hPsi_site_22831 iPseU_CNN:0.49571308;iRNA_PseU:0 22832 chr6 118015319 118015319 1 + G A KIRP 118015318 + 118015298 118015338 41 AAGAGACCCACAGATTTGGATGTAGATACGTTAGCCAGTTT AAGAGACCCACAGATTTGGATATAGATACGTTAGCCAGTTT < 41bp 0.431545424045222 0.823108625331938 0.32025158 0.55700827 prediction 0.646217250663876 Functional Gain - NUS1 ENSG00000153989 CDS Human protein_coding chr6:118015318 chr6:118015319 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29108 0 0 1 0 1 Endoplasmic reticulum 0.443703604488158 0.440096861150772 0.11401654 0 hPsi_site_22832 iPseU_CNN:0.11401654;iRNA_PseU:0 22833 chr4 85569749 85569749 1 + G A GBM 85569748 + 85569728 85569768 41 AGTGCTACAGCAGTTGTTGGTGCTTCAACCTGAACAGCAGT AGTGCTACAGCAGTTGTTGGTACTTCAACCTGAACAGCAGT < 41bp 0.432940835612815 0.823104323839419 0.18594003 0.6938412 prediction 0.646208647678838 Functional Gain - CDS1 ENSG00000163624 CDS Human protein_coding chr4:85569748 chr4:85569749 synonymous SNV . 0 22 hPsi_associated_SNPs_29109 0 0 1 0 1 Endoplasmic reticulum 0.438659890002288 0.438709553984982 0.3876824 0 hPsi_site_22833 iPseU_CNN:0.3876824;iRNA_PseU:0 22834 chr7 116862958 116862958 1 + G A LGG 116862957 + 116862937 116862977 41 CAGAGTTCAGGGACTGGAATTGCAAGAGTATTTTCATGCGT CAGAGTTCAGGGACTGGAATTACAAGAGTATTTTCATGCGT < 41bp 0.439742721843317 0.823102720565611 0.3933102 0.38127849 prediction 0.646205441131221 Functional Gain - ST7 ENSG00000004866 CDS Human protein_coding chr7:116862957 chr7:116862958 nonsynonymous SNV 0.961 1 22 hPsi_associated_SNPs_29110 0 0 0 0 1 Cytosol 0.438765032167224 0.438720241423445 0 0 hPsi_site_22834 iPseU_CNN:0;iRNA_PseU:0 22835 chr4 122722628 122722628 1 + G A BLCA 122722627 + 122722607 122722647 41 GAACGCCGCTTCCTACTCCGTGCCATCGAAGAGAAGAAGGT GAACGCCGCTTCCTACTCCGTACCATCGAAGAGAAGAAGGT < 41bp 0.571852747125003 0.894954450417539 0.27854604 0.47317657 prediction 0.64620340658507 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122722627 chr4:122722628 nonsynonymous SNV 0.934 4 22 hPsi_associated_SNPs_29111 0 0 1 0 1 Nucleus 0.439298520256154 0.438756750941588 0 0 hPsi_site_22835 iPseU_CNN:0;iRNA_PseU:0 22836 chr8 19682441 19682441 1 + G A UCEC 19682440 + 19682420 19682460 41 ATGCTGGTCTTCTTTAAGAATGCATTCCAGTATGTCAACAG ATGCTGGTCTTCTTTAAGAATACATTCCAGTATGTCAACAG < 41bp 0.575235314993861 0.898334753216296 0.21076074 0.49344456 prediction 0.646198876444868 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19682440 chr8:19682441 nonsynonymous SNV 0.968 1 22 hPsi_associated_SNPs_29112 0 0 0 0 1 Cytosol 0.442428854167835 0.437979792555134 0 0 hPsi_site_22836 iPseU_CNN:0;iRNA_PseU:0 22837 chr6 160212043 160212043 1 + G A ESCA 160212042 + 160212022 160212062 41 GAAGTGGACCCTGTGGAAAATGAAGCTGTCGCCCCAGAATT GAAGTGGACCCTGTGGAAAATAAAGCTGTCGCCCCAGAATT < 41bp 0.579058346343035 0.90215616873125 0.1947732 0.31815222 prediction 0.646195644776432 Functional Gain - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212042 chr6:160212043 nonsynonymous SNV 0.375 1 22 hPsi_associated_SNPs_29113 0 0 1 0 0 Cytosol 0.43871859299813 0.438718592995035 0 0 hPsi_site_22837 iPseU_CNN:0;iRNA_PseU:0 22838 chr8 56708657 56708657 1 + C A UCEC 56708656 + 56708636 56708676 41 GATGAAAAACAAACACATCTTCTTTACCAAAGAGTCAGAAA GATGAAAAACAAACACATCTTATTTACCAAAGAGTCAGAAA < 41bp 0.469143828512393 0.823095299885134 0.29282433 0.28969824 prediction 0.646190599770268 Functional Gain - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56708656 chr8:56708657 nonsynonymous SNV 0.990 0 22 hPsi_associated_SNPs_29114 0 0 1 0 1 Nucleus 0.43772483658502 0.438719549439538 0 0 hPsi_site_22838 iPseU_CNN:0;iRNA_PseU:0 22839 chr20 18118638 18118638 1 + G A UCEC 18118637 + 18118617 18118657 41 GGTGGTGCTGGGCCTCTCGGTGCTGCTGACGGCGGCCACAG GGTGGTGCTGGGCCTCTCGGTACTGCTGACGGCGGCCACAG < 41bp 0.563323064497452 0.886416077465366 0.22653481 0.93223405 prediction 0.646186025935828 Functional Gain - PET117 ENSG00000232838 CDS Human protein_coding chr20:18118637 chr20:18118638 synonymous SNV . 0 22 hPsi_associated_SNPs_29115 0 0 1 0 1 Endoplasmic reticulum 0.438719005242317 0.438719238683631 0.8644681 0 hPsi_site_22839 iPseU_CNN:0.8644681;iRNA_PseU:0 22840 chr22 48972337 48972337 1 + C A LUSC 48972336 + 48972316 48972356 41 GGCACTGGCAGGGGCCGCGCTCTGCTGCTTCCTCGTCCTAG GGCACTGGCAGGGGCCGCGCTATGCTGCTTCCTCGTCCTAG < 41bp 0.528074433171875 0.851165707398784 0.54623365 0.844224 prediction 0.646182548453818 Functional Gain - FAM19A5 ENSG00000219438 CDS Human protein_coding chr22:48972336 chr22:48972337 synonymous SNV . 0 22 hPsi_associated_SNPs_29116 0 0 0 0 1 membrane 0.438718084865492 0.43875939069105 0.5959807 0 hPsi_site_22840 iPseU_CNN:0.5959807;iRNA_PseU:0 22841 chr19 54139976 54139976 1 + G A UCEC 54139975 + 54139955 54139995 41 ACCAGTGTCGGCCTGAGAAATGCAGACACACTACCCAGATT ACCAGTGTCGGCCTGAGAAATACAGACACACTACCCAGATT < 41bp 0.569912211615787 0.893002514462892 0.32574698 0.62207854 prediction 0.646180605694211 Functional Gain - DPRX ENSG00000204595 CDS Human protein_coding chr19:54139975 chr19:54139976 nonsynonymous SNV 0.000 2 22 hPsi_associated_SNPs_29117 0 0 0 0 0 exosome 0.438717798174072 0.438716494808362 0.24415708 0 hPsi_site_22841 iPseU_CNN:0.24415708;iRNA_PseU:0 22842 chr1 120277341 120277341 1 + C A rs77632964 120277340 + 120277320 120277360 41 CCCCTGGAGGAGATCTGGCCTCTCTGTGATTTCATCACTGT CCCCTGGAGGAGATCTGGCCTATCTGTGATTTCATCACTGT < 41bp 0.446414342826671 0.823088306047934 0.2948823 0.44440633 prediction 0.646176612095867 Functional Gain - PHGDH ENSG00000092621 CDS Human protein_coding chr1:120277340 chr1:120277341 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29118 0 0 1 0 2 Ribosome 0.438718437823238 0.438505642966822 0 0 hPsi_site_22842 iPseU_CNN:0;iRNA_PseU:0 22843 chr9 34649041 34649041 1 + C A UCEC 34649040 + 34649020 34649060 41 CTTGACCAAGTATGACAACCTCTTTGAGACGTCCTTTCCCT CTTGACCAAGTATGACAACCTATTTGAGACGTCCTTTCCCT < 41bp 0.45229971392705 0.823086479621898 0.3851959 0.45931476 prediction 0.646172959243796 Functional Gain - GALT ENSG00000213930 CDS Human protein_coding chr9:34649040 chr9:34649041 synonymous SNV . 0 22 hPsi_associated_SNPs_29119 0 0 1 0 2 Cytosol 0.438718666027595 0.438718891359282 0 0 hPsi_site_22843 iPseU_CNN:0;iRNA_PseU:0 22844 chr14 21167756 21167756 1 + G T UCEC 21167755 + 21167735 21167775 41 CGCTTCAACACCTTCATCCATGAAGATATCTGGAACATTCG CGCTTCAACACCTTCATCCATTAAGATATCTGGAACATTCG < 41bp 0.501408793730074 0.824490337815482 0.18043354 0.2932505 prediction 0.646163088170816 Functional Gain - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167755 chr14:21167756 stopgain 0.997 0 22 hPsi_associated_SNPs_29120 0 0 1 0 0 cytosol 0.438718248485512 0.43871896185222 0 0 hPsi_site_22844 iPseU_CNN:0;iRNA_PseU:0 22845 chr2 27746168 27746168 1 + C A STAD 27746167 + 27746147 27746187 41 CGCCTTGCTGAGCCTCCTATTCCGGTGCTCGATCACTGAGG CGCCTTGCTGAGCCTCCTATTACGGTGCTCGATCACTGAGG < 41bp 0.533949257366536 0.857030790880226 0.37612432 0.6458463 prediction 0.64616306702738 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27746167 chr2:27746168 nonsynonymous SNV 0.962 0 22 hPsi_associated_SNPs_29121 0 0 0 0 1 cytosol 0.43871859299513 0.438718637902834 0.2916926 0 hPsi_site_22845 iPseU_CNN:0.2916926;iRNA_PseU:0 22846 chr18 72183571 72183571 1 + G T LIHC 72183570 + 72183550 72183590 41 GTGATTCCCAGGAAGGTGGTTGGCAAGTTCTCCATCAGGCT GTGATTCCCAGGAAGGTGGTTTGCAAGTTCTCCATCAGGCT < 41bp 0.479745703231588 0.823080532594818 0.35646892 0.5151431 prediction 0.646161065189635 Functional Gain - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72183570 chr18:72183571 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_29122 0 0 1 0 0 Ribosome 0.438718593936259 0.4387185949048 0.0302861999999999 0 hPsi_site_22846 iPseU_CNN:0.0302861999999999;iRNA_PseU:0 22847 chr10 135051638 135051638 1 + G A LUAD 135051637 + 135051617 135051657 41 GCCGGGTCCTCAAATCTGCCTGCGCCGGAGAGGACCATGGC GCCGGGTCCTCAAATCTGCCTACGCCGGAGAGGACCATGGC < 41bp 0.429824092221145 0.823079134652475 0.21550989 0.41682097 prediction 0.646158269304949 Functional Gain - VENTX ENSG00000151650 CDS Human protein_coding chr10:135051637 chr10:135051638 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_29123 0 0 0 0 1 Nucleus 0.438725523634455 0.438719120149366 0 0 hPsi_site_22847 iPseU_CNN:0;iRNA_PseU:0 22848 chr17 42429147 42429147 1 + G A SKCM 42429146 + 42429126 42429166 41 TCACGTCTGGGGAGTGGGGCTGCTGTCCAATCCCAGAGGTA TCACGTCTGGGGAGTGGGGCTACTGTCCAATCCCAGAGGTA < 41bp 0.580106612770401 0.903179825982407 0.2321895 0.7077211 prediction 0.646146426424013 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42429146 chr17:42429147 nonsynonymous SNV 0.996 5 22 hPsi_associated_SNPs_29124 0 0 1 0 1 Endoplasmic reticulum 0.438699898142488 0.438717952197706 0.4154422 0 hPsi_site_22848 iPseU_CNN:0.4154422;iRNA_PseU:0 22849 chr1 248262779 248262779 1 + C A READ 248262778 + 248262758 248262798 41 GTGCCTTATCATCCTCATATTCTTTCTGGCCTCGGTGGGTA GTGCCTTATCATCCTCATATTATTTCTGGCCTCGGTGGGTA < 41bp 0.4746502408677 0.823068739062495 0.35373917 0.42883635 prediction 0.64613747812499 Functional Gain - OR2L13 ENSG00000196071 CDS Human protein_coding chr1:248262778 chr1:248262779 nonsynonymous SNV 0.001 4 22 hPsi_associated_SNPs_29125 0 0 0 0 0 Nucleus 0.438718592995102 0.43871856978222 0 0 hPsi_site_22849 iPseU_CNN:0;iRNA_PseU:0 22850 chr7 150769178 150769178 1 + G A OV 150769177 + 150769157 150769197 41 CCAGGAGATCTTCGCCTTCTTGATCTCACTCATCTTCATCT CCAGGAGATCTTCGCCTTCTTAATCTCACTCATCTTCATCT < 41bp 0.409300496815628 0.823066145180358 0.2322987 0.6318556 prediction 0.646132290360715 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769177 chr7:150769178 synonymous SNV . 0 22 hPsi_associated_SNPs_29126 0 0 1 0 1 Ribosome 0.438732939691113 0.438710674980035 0.2637112 0 hPsi_site_22850 iPseU_CNN:0.2637112;iRNA_PseU:0 22851 chr8 94713524 94713524 1 + C A UCEC 94713523 + 94713503 94713543 41 TTTTGGAGAACTGTGCCAAATCTTCGCTGCCTATGTGCGGA TTTTGGAGAACTGTGCCAAATATTCGCTGCCTATGTGCGGA < 41bp 0.528768691445218 0.851832170918077 0.40957564 0.52515537 prediction 0.646126958945717 Functional Gain - FAM92A ENSG00000188343 CDS Human protein_coding chr8:94713523 chr8:94713524 synonymous SNV . 0 22 hPsi_associated_SNPs_29127 0 0 0 0 1 unknown 0.438714156013599 0.438712130751691 0.05031074 0 hPsi_site_22851 iPseU_CNN:0.05031074;iRNA_PseU:0 22852 chr19 56691982 56691982 1 + G A STAD 56691981 + 56691961 56692001 41 GGAGGCTGGACCCTCAATAGTGCTGGCTACCTTCTGGGTCC GGAGGCTGGACCCTCAATAGTACTGGCTACCTTCTGGGTCC < 41bp 0.409688706871497 0.823062074896603 0.2231479 0.3584385 prediction 0.646124149793207 Functional Gain - GALP ENSG00000197487 CDS Human protein_coding chr19:56691981 chr19:56691982 nonsynonymous SNV 0.893 1 22 hPsi_associated_SNPs_29128 0 0 0 0 2 exosome 0.438718613682311 0.438716170640498 0 0 hPsi_site_22852 iPseU_CNN:0;iRNA_PseU:0 22853 chr19 54234301 54234301 1 + G A BLCA 54234300 + 54234280 54234320 41 GGGAAGCCCTTTCTGTTGTCTGAAAGAAGAGAAAGCGCTTC GGGAAGCCCTTTCTGTTGTCTAAAAGAAGAGAAAGCGCTTC < 41bp 0.495847625546964 0.823049088572887 0.21607748 0.2705713 prediction 0.646098177145774 Functional Gain - MIR518A1 ENSG00000207803 ncRNA_exonic Human miRNA chr19:54234300 chr19:54234301 . . 0 22 hPsi_associated_SNPs_29129 0 0 0 0 0 unknown 0.438718743819868 0.438714577791064 0 0 hPsi_site_22853 iPseU_CNN:0;iRNA_PseU:0 22854 chr5 79336073 79336073 1 + G A SKCM 79336072 + 79336052 79336092 41 ACTGACAACAGTAAATATTTTGAATTTACTGTGATGGGACG ACTGACAACAGTAAATATTTTAAATTTACTGTGATGGGACG < 41bp 0.42842114534061 0.823044548595756 0.27538985 0.2962451 prediction 0.646089097191512 Functional Gain - THBS4 ENSG00000113296 CDS Human protein_coding chr5:79336072 chr5:79336073 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29130 0 0 0 0 1 exosome 0.438726661654642 0.438625579975364 0 0 hPsi_site_22854 iPseU_CNN:0;iRNA_PseU:0 22855 chr3 128614208 128614208 1 + G A UCEC 128614207 + 128614187 128614227 41 ACTAGGGGAGATCATCAGCATGGATGGGTCCATCACTGTGA ACTAGGGGAGATCATCAGCATAGATGGGTCCATCACTGTGA < 41bp 0.58136039345315 0.904397997724865 0.26434582 0.60010093 prediction 0.646075208543431 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128614207 chr3:128614208 nonsynonymous SNV 0.023 1 22 hPsi_associated_SNPs_29131 0 0 1 0 2 Endoplasmic reticulum 0.438718592697817 0.43904203242188 0.20020186 0 hPsi_site_22855 iPseU_CNN:0.20020186;iRNA_PseU:0 22856 chr7 5104566 5104566 1 + C A UCEC 5104565 + 5104545 5104585 41 ATGTAGTGAATGTGGAAAGTTCTCTCAGTTGTATCTCACCG ATGTAGTGAATGTGGAAAGTTATCTCAGTTGTATCTCACCG < 41bp 0.524827949618103 0.847863706395699 0.69453 0.79018587 prediction 0.646071513555192 Functional Gain - RBAK ENSG00000146587 CDS Human protein_coding chr7:5104565 chr7:5104566 nonsynonymous SNV 0.217 0 22 hPsi_associated_SNPs_29132 0 0 1 0 0 Cytosol 0.438687280680551 0.438717633219473 0.19131174 0 hPsi_site_22856 iPseU_CNN:0.19131174;iRNA_PseU:0 22857 chr11 89028405 89028405 1 + C A LUAD 89028404 + 89028384 89028424 41 GGCGGCGATGGTAGGGGCCGTCCTCACTGCCCTGCTGGCAG GGCGGCGATGGTAGGGGCCGTACTCACTGCCCTGCTGGCAG < 41bp 0.543765409479971 0.866799612618321 0.23460203 0.71149087 prediction 0.6460684062767 Functional Gain - TYR ENSG00000077498 CDS Human protein_coding chr11:89028404 chr11:89028405 synonymous SNV . 0 22 hPsi_associated_SNPs_29133 0 0 0 0 1 unknown 0.438718218308241 0.438539695291302 0.42298174 0 hPsi_site_22857 iPseU_CNN:0.42298174;iRNA_PseU:0 22858 chr16 21262025 21262025 1 + G A SKCM 21262024 + 21262004 21262044 41 GCTCTGCTGCTCTGCTCTGATGAGGACCTTCAGAGCATACA GCTCTGCTGCTCTGCTCTGATAAGGACCTTCAGAGCATACA < 41bp 0.576004724051026 0.89903699976804 0.3330206 0.35980377 prediction 0.646064551434029 Functional Gain - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21262024 chr16:21262025 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29134 0 0 0 0 0 exosome 0.438724133899795 0.438719716633835 0 0 hPsi_site_22858 iPseU_CNN:0;iRNA_PseU:0 22859 chr16 30594033 30594033 1 + C A STAD 30594032 + 30594012 30594052 41 GGTGGATCCACCGATGGGCTTCCAGGGCGGTCTTGCGCTTG GGTGGATCCACCGATGGGCTTACAGGGCGGTCTTGCGCTTG < 41bp 0.51894008296939 0.841970112731711 0.2990018 0.5752336 prediction 0.646060059524643 Functional Gain - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594032 chr16:30594033 stopgain 0.019 0 22 hPsi_associated_SNPs_29135 0 0 0 0 0 Nucleus 0.438725312588389 0.439268323851814 0.1504672 0 hPsi_site_22859 iPseU_CNN:0.1504672;iRNA_PseU:0 22860 chr8 105361101 105361101 1 + C A UCEC 105361100 + 105361080 105361120 41 AGCTGGCACAGGGATCGTCATCTTGGGACACGTAGAAAATA AGCTGGCACAGGGATCGTCATATTGGGACACGTAGAAAATA < 41bp 0.454716694689706 0.823029006321417 0.4888464 0.5878141 prediction 0.646058012642834 Functional Gain - DCSTAMP ENSG00000164935 CDS Human protein_coding chr8:105361100 chr8:105361101 synonymous SNV . 0 22 hPsi_associated_SNPs_29136 0 0 0 0 0 exosome 0.438717723201745 0.438745691305765 0.1756282 0 hPsi_site_22860 iPseU_CNN:0.1756282;iRNA_PseU:0 22861 chr4 6303319 6303319 1 + C A rs71524361 6303318 + 6303298 6303338 41 GGAGCTCACCAAGATCGCAGTCACCGTGGCGGTCTGTAGTG GGAGCTCACCAAGATCGCAGTAACCGTGGCGGTCTGTAGTG < 41bp 0.464801985407419 0.823028164668254 0.088247 0.28873467 prediction 0.646056329336508 Functional Gain - WFS1 ENSG00000109501 CDS Human protein_coding chr4:6303318 chr4:6303319 synonymous SNV . 0 22 hPsi_associated_SNPs_29137 3 0 1 0 0 nucleus 0.438718602701207 0.438718592989169 0 0 hPsi_site_22861 iPseU_CNN:0;iRNA_PseU:0 22862 chr11 5020758 5020758 1 + G A COAD 5020757 + 5020737 5020777 41 CCTCTCTCACGCCTTCTGTTTGCACCAGGATGTTCTAAGAT CCTCTCTCACGCCTTCTGTTTACACCAGGATGTTCTAAGAT < 41bp 0.565530568671841 0.888554473827333 0.3389218 0.838108 prediction 0.646047810310984 Functional Gain - OR51L1 ENSG00000176798 CDS Human protein_coding chr11:5020757 chr11:5020758 synonymous SNV . 0 22 hPsi_associated_SNPs_29138 0 0 0 0 0 unknown 0.438707515128451 0.438723994384264 0.676216 0 hPsi_site_22862 iPseU_CNN:0.676216;iRNA_PseU:0 22863 chr1 219347307 219347307 1 + C A UCEC 219347306 + 219347286 219347326 41 GAGGCATAGCGCCTCTCTGATCTTCCTGCATGGCTCAGGTG GAGGCATAGCGCCTCTCTGATATTCCTGCATGGCTCAGGTG < 41bp 0.479782531154153 0.823022569747851 0.30062094 0.7017508 prediction 0.646045139495702 Functional Gain - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219347306 chr1:219347307 synonymous SNV . 0 22 hPsi_associated_SNPs_29139 0 0 1 0 1 Ribosome 0.438719642074125 0.438717892367643 0.4035016 0 hPsi_site_22863 iPseU_CNN:0.4035016;iRNA_PseU:0 22864 chr19 16631682 16631682 1 + G A UCEC 16631681 + 16631661 16631701 41 CTCCGCCGGGCCCGCATTTTTGCTCGGAAGAACTCATAGAG CTCCGCCGGGCCCGCATTTTTACTCGGAAGAACTCATAGAG < 41bp 0.433872563383073 0.823021542952896 0.33051708 0.8052796 prediction 0.646043085905792 Functional Gain - CHERP ENSG00000085872 CDS Human protein_coding chr19:16631681 chr19:16631682 nonsynonymous SNV 0.991 2 22 hPsi_associated_SNPs_29140 0 0 0 0 0 Ribosome 0.438718583310242 0.438716845920075 0.6105592 0 hPsi_site_22864 iPseU_CNN:0.6105592;iRNA_PseU:0 22865 chr10 99359502 99359502 1 + G A BRCA 99359501 + 99359481 99359521 41 AGCCAACACAGGGCTGGACCTGCCTGTGGATGCAGTGGTCA AGCCAACACAGGGCTGGACCTACCTGTGGATGCAGTGGTCA < 41bp 0.421813877839816 0.823021459536429 0.21304649 0.5868157 prediction 0.646042919072858 Functional Gain - HOGA1 ENSG00000241935 CDS Human protein_coding chr10:99359501 chr10:99359502 synonymous SNV . 0 22 hPsi_associated_SNPs_29141 0 0 0 1 2 nucleus 0.438625998885224 0.438717085345345 0.1736314 0 hPsi_site_22865 iPseU_CNN:0.1736314;iRNA_PseU:0 22866 chr16 2130299 2130299 1 + G A ESCA 2130298 + 2130278 2130318 41 AGCTGGCACCCGGGTTCCTGTGCAGGAGAAGACGAACCTGG AGCTGGCACCCGGGTTCCTGTACAGGAGAAGACGAACCTGG < 41bp 0.409079909597539 0.823020957473529 0.26855588 0.6940062 prediction 0.646041914947058 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2130298 chr16:2130299 synonymous SNV . 0 22 hPsi_associated_SNPs_29142 0 0 1 0 1 Endoplasmic reticulum 0.438721812621636 0.438718905914385 0.3880124 0 hPsi_site_22866 iPseU_CNN:0.3880124;iRNA_PseU:0 22867 chr8 145603147 145603147 1 + C A GBM 145603146 + 145603126 145603166 41 CTGGCCGTCCCCTGCTGTGTTCTTCAGGAGAAACGTCAGGG CTGGCCGTCCCCTGCTGTGTTATTCAGGAGAAACGTCAGGG < 41bp 0.463485526602514 0.823020510084199 0.61038345 0.7993394 prediction 0.646041020168399 Functional Gain - ADCK5 ENSG00000173137 CDS Human protein_coding chr8:145603146 chr8:145603147 nonsynonymous SNV 0.433 0 22 hPsi_associated_SNPs_29143 0 0 1 0 2 chromatin 0.438718859901937 0.438460962953116 0.3779119 0 hPsi_site_22867 iPseU_CNN:0.3779119;iRNA_PseU:0 22868 chr2 27278089 27278089 1 + G A CESC 27278088 + 27278068 27278108 41 CTTTAAGCTGATTCCCATGTTGAACCCCGATGGTGTGGTCC CTTTAAGCTGATTCCCATGTTAAACCCCGATGGTGTGGTCC < 41bp 0.578882815358497 0.901899552198772 0.46849912 0.8744923 prediction 0.646033473680551 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278088 chr2:27278089 synonymous SNV . 0 22 hPsi_associated_SNPs_29144 0 0 1 0 1 Cytosol 0.431084342514544 0.438718230565456 0.7489846 0 hPsi_site_22868 iPseU_CNN:0.7489846;iRNA_PseU:0 22869 chr17 39421969 39421969 1 + G A rs570476245 39421968 + 39421948 39421988 41 CAGAGCAGCTCCTGTGCACCTGTGTACTGCAGAAGAACCTG CAGAGCAGCTCCTGTGCACCTATGTACTGCAGAAGAACCTG < 41bp 0.560063471897393 0.883079166519279 0.20874843 0.26866978 prediction 0.646031389243773 Functional Gain - KRTAP9-6 ENSG00000212659 CDS Human protein_coding chr17:39421968 chr17:39421969 nonsynonymous SNV 0.101 1 22 hPsi_associated_SNPs_29145 0 0 0 0 0 unknown 0.438677148777848 0.438973044145296 0 0 hPsi_site_22869 iPseU_CNN:0;iRNA_PseU:0 22870 chr11 57571170 57571170 1 + G T COAD 57571169 + 57571149 57571189 41 GCACTGCATGCCTTGACAGATGAAGTGATCATTCCTCATTC GCACTGCATGCCTTGACAGATTAAGTGATCATTCCTCATTC < 41bp 0.490428438536938 0.823012752201962 0.23036304 0.31513 prediction 0.646025504403923 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57571169 chr11:57571170 stopgain 1.000 1 22 hPsi_associated_SNPs_29146 0 0 1 0 1 Nucleus 0.438322437704942 0.438715397232664 0 0 hPsi_site_22870 iPseU_CNN:0;iRNA_PseU:0 22871 chr11 56114156 56114156 1 + C A COAD 56114155 + 56114135 56114175 41 CTTCTCAGGCTGTAATTTGCTCTTCTCCCTCTCAATTGTTC CTTCTCAGGCTGTAATTTGCTATTCTCCCTCTCAATTGTTC < 41bp 0.490611015009611 0.823011273055995 0.5512004 0.68025535 prediction 0.64602254611199 Functional Gain - OR8K1 ENSG00000150261 CDS Human protein_coding chr11:56114155 chr11:56114156 synonymous SNV . 0 22 hPsi_associated_SNPs_29147 0 0 0 0 0 unknown 0.438717600651819 0.438719461317516 0.2581099 0 hPsi_site_22871 iPseU_CNN:0.2581099;iRNA_PseU:0 22872 chr5 167841554 167841554 1 + G A UCEC 167841553 + 167841533 167841573 41 GAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCC GAAGCGGCTGGAAAAGGACCTACAGGCAGCCCGGGACACCC < 41bp 0.401939246966107 0.823010728748043 0.38093737 0.62196195 prediction 0.646021457496086 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167841553 chr5:167841554 synonymous SNV . 0 22 hPsi_associated_SNPs_29148 0 0 0 0 1 Ribosome 0.438738587069762 0.438739576480111 0.2439239 0 hPsi_site_22872 iPseU_CNN:0.2439239;iRNA_PseU:0 22873 chr12 58140837 58140837 1 + G A UCEC 58140836 + 58140816 58140856 41 AGCCCCACATGCCAGATGTGTGGAGAAAAGTTTCTTAAGCA AGCCCCACATGCCAGATGTGTAGAGAAAAGTTTCTTAAGCA < 41bp 0.402460031476855 0.823003274863067 0.29947397 0.6975529 prediction 0.646006549726133 Functional Gain - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140836 chr12:58140837 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29149 0 0 1 0 2 Ribosome 0.438718421646857 0.438725862863374 0.3951058 0 hPsi_site_22873 iPseU_CNN:0.3951058;iRNA_PseU:0 22874 chrX 37526718 37526718 1 + C A HNSC 37526717 + 37526697 37526737 41 TGTACCGGCTCACGGGAAACTCTAAATACATCTACCGAGCT TGTACCGGCTCACGGGAAACTATAAATACATCTACCGAGCT < 41bp 0.462137922131594 0.822995915960747 0.24651861 0.39586142 prediction 0.645991831921493 Functional Gain - LANCL3 ENSG00000147036 CDS Human protein_coding chrX:37526717 chrX:37526718 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_29150 0 0 0 0 1 chromatin 0.438718606216462 0.438718592017019 0 0 hPsi_site_22874 iPseU_CNN:0;iRNA_PseU:0 22875 chr10 122348880 122348880 1 + C A CESC 122348879 + 122348859 122348899 41 TGCTACAGACAGCACTATCCTCCTCTGGCCAACACAGCTTG TGCTACAGACAGCACTATCCTACTCTGGCCAACACAGCTTG < 41bp 0.467545655016278 0.822985845516662 0.14449143 0.263621 prediction 0.645971691033325 Functional Gain - PLPP4 ENSG00000203805 CDS Human protein_coding chr10:122348879 chr10:122348880 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29151 0 0 0 5 1 Cytosol 0.438837634666359 0.438666774576664 0 0 hPsi_site_22875 iPseU_CNN:0;iRNA_PseU:0 22876 chr9 130423461 130423461 1 + G A BRCA 130423460 + 130423440 130423480 41 ACTCTGACGGAAATCAATATTGCATTTCTCCCGTATGAATC ACTCTGACGGAAATCAATATTACATTTCTCCCGTATGAATC < 41bp 0.400606776865148 0.822985077137461 0.33791137 0.43470106 prediction 0.645970154274923 Functional Gain - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130423460 chr9:130423461 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29152 0 0 1 0 2 Cytosol 0.43939047583451 0.439083321468344 0 0 hPsi_site_22876 iPseU_CNN:0;iRNA_PseU:0 22877 chr7 92083847 92083847 1 + C A UCEC 92083846 + 92083826 92083866 41 ACCAAATTGGTGATGTTGTTTCTGTGATTGATGAACAAGAT ACCAAATTGGTGATGTTGTTTATGTGATTGATGAACAAGAT < 41bp 0.466603864456577 0.822982304860367 0.35865304 0.4072615 prediction 0.645964609720735 Functional Gain - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92083846 chr7:92083847 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29153 0 0 1 0 1 Ribosome 0.438715629415335 0.438677315610124 0 0 hPsi_site_22877 iPseU_CNN:0;iRNA_PseU:0 22878 chr6 31785219 31785219 1 + C T BLCA 31785220 - 31785200 31785240 41 CTTCTTCTTGTCCGCCTCGCTGATCTTGCCCTTGAGCCCCT CTTCTTCTTGTCCGCCTCGCTAATCTTGCCCTTGAGCCCCT < 41bp 0.429866249345372 0.822982110781561 0.20717525 0.35226035 prediction 0.645964221563121 Functional Gain - HSPA1A ENSG00000204389 CDS Human protein_coding chr6:31785220 chr6:31785219 synonymous SNV . 0 22 hPsi_associated_SNPs_29154 0 0 0 0 0 Ribosome 0.438746193057192 0.438718617109373 0 0 hPsi_site_22878 iPseU_CNN:0;iRNA_PseU:0 22879 chr6 90605220 90605220 1 + G A LUSC 90605219 + 90605199 90605239 41 TGTCCCTGGGCTGGCAGTGCTGGAAATCAGCACCTGGGACA TGTCCCTGGGCTGGCAGTGCTAGAAATCAGCACCTGGGACA < 41bp 0.420571786660121 0.822979642340478 0.19874719 0.32795787 prediction 0.645959284680956 Functional Gain - GJA10 ENSG00000135355 CDS Human protein_coding chr6:90605219 chr6:90605220 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_29155 0 0 0 0 0 unknown 0.43871859300221 0.438689999266485 0 0 hPsi_site_22879 iPseU_CNN:0;iRNA_PseU:0 22880 chr20 44751843 44751843 1 + G A UCEC 44751842 + 44751822 44751862 41 TGTCATCTGCTTTCGAAAAATGTCACCCTTGGACAAGGTAT TGTCATCTGCTTTCGAAAAATATCACCCTTGGACAAGGTAT < 41bp 0.424975914177216 0.822979517655116 0.23825803 0.32863653 prediction 0.645959035310233 Functional Gain - CD40 ENSG00000101017 CDS Human protein_coding chr20:44751842 chr20:44751843 nonsynonymous SNV 0.834 5 22 hPsi_associated_SNPs_29156 0 0 0 0 2 Endoplasmic reticulum 0.438012355832186 0.438625975938326 0 0 hPsi_site_22880 iPseU_CNN:0;iRNA_PseU:0 22881 chr13 46054318 46054318 1 + G A LIHC 46054317 + 46054297 46054337 41 TGTGATGCTATATTGAATGATGTAAACAGTGCTCTTCAGCA TGTGATGCTATATTGAATGATATAAACAGTGCTCTTCAGCA < 41bp 0.41708402464661 0.822975202241192 0.33266908 0.6155875 prediction 0.645950404482385 Functional Gain - COG3 ENSG00000136152 CDS Human protein_coding chr13:46054317 chr13:46054318 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29157 0 0 1 0 2 Nucleus 0.438718320783152 0.438718567498479 0.231175 0 hPsi_site_22881 iPseU_CNN:0.231175;iRNA_PseU:0 22882 chr12 112147407 112147407 1 + G T LUAD 112147406 + 112147386 112147426 41 GTGCTTGGAGCAGCTCGGCCTGCAGCCCTCTGAGTCCATCT GTGCTTGGAGCAGCTCGGCCTTCAGCCCTCTGAGTCCATCT < 41bp 0.524733885055883 0.847708440565821 0.3734979 0.6571999 prediction 0.645949111019876 Functional Gain - ACAD10 ENSG00000111271 CDS Human protein_coding chr12:112147406 chr12:112147407 synonymous SNV . 0 22 hPsi_associated_SNPs_29158 0 0 1 0 2 Endoplasmic reticulum 0.43871859659847 0.438718595580273 0.3143998 0 hPsi_site_22882 iPseU_CNN:0.3143998;iRNA_PseU:0 22883 chr5 148208063 148208063 1 + G A rs45521531 148208062 + 148208042 148208082 41 GGACCTTTCAGCTGTGAACATGGACTCTTCCCCCACTCCTC GGACCTTTCAGCTGTGAACATAGACTCTTCCCCCACTCCTC < 41bp 0.487199426870947 0.822973027449948 0.28279245 0.42161992 prediction 0.645946054899897 Functional Gain - ADRB2 ENSG00000169252 UTR3 Human protein_coding chr5:148208062 chr5:148208063 . . 0 22 hPsi_associated_SNPs_29159 0 0 0 0 0 Cytoplasm 0.438718365680706 0.43871859759375 0 0 hPsi_site_22883 iPseU_CNN:0;iRNA_PseU:0 22884 chr8 145533476 145533476 1 + G A BLCA 145533475 + 145533455 145533495 41 CAGGTGTCCACCCTGAAGAGTGAAGACATAAAGATCCGCCA CAGGTGTCCACCCTGAAGAGTAAAGACATAAAGATCCGCCA < 41bp 0.41255345900195 0.822971266236676 0.28930664 0.4719461 prediction 0.645942532473352 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145533475 chr8:145533476 nonsynonymous SNV 0.968 2 22 hPsi_associated_SNPs_29160 0 0 1 0 1 chromatin 0.440130599819165 0.438719075732142 0 0 hPsi_site_22884 iPseU_CNN:0;iRNA_PseU:0 22885 chr11 5906110 5906110 1 + C A LUAD 5906109 + 5906089 5906129 41 GGCCTGTGCACCCATTAAGATCAACATAATCTATGGGCTCA GGCCTGTGCACCCATTAAGATAAACATAATCTATGGGCTCA < 41bp 0.515112028295902 0.838083262621537 0.32154596 0.7008333 prediction 0.645942468651269 Functional Gain - OR52E4 ENSG00000180974 CDS Human protein_coding chr11:5906109 chr11:5906110 synonymous SNV . 0 22 hPsi_associated_SNPs_29161 0 0 0 0 0 unknown 0.438725266160961 0.438718593476827 0.4016666 0 hPsi_site_22885 iPseU_CNN:0.4016666;iRNA_PseU:0 22886 chr8 87151831 87151831 1 + C A UCEC 87151830 + 87151810 87151850 41 ATTGCAGAGACACCTTCAGATCTCTTTAATGCCATTCTGAT ATTGCAGAGACACCTTCAGATATCTTTAATGCCATTCTGAT < 41bp 0.462769794600176 0.822970012440195 0.26227453 0.40723622 prediction 0.64594002488039 Functional Gain - ATP6V0D2 ENSG00000147614 CDS Human protein_coding chr8:87151830 chr8:87151831 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29162 0 0 0 0 1 Cytosol 0.438717436949323 0.438729584304616 0 0 hPsi_site_22886 iPseU_CNN:0;iRNA_PseU:0 22887 chr16 67575385 67575385 1 + G A OV 67575384 + 67575364 67575404 41 TGGTTGTGGGCAGTGTCTCCTGTGAGACCAAGGACCTGTTT TGGTTGTGGGCAGTGTCTCCTATGAGACCAAGGACCTGTTT < 41bp 0.408830087823224 0.822968084389172 0.3378661 0.30095524 prediction 0.645936168778344 Functional Gain - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575384 chr16:67575385 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29163 0 0 0 0 2 unknown 0.438719650131013 0.438720529550172 0 0 hPsi_site_22887 iPseU_CNN:0;iRNA_PseU:0 22888 chr16 57449687 57449687 1 + G A rs34379253 57449686 + 57449666 57449706 41 CTTCTGTGTAGTTTTGTAACTGTGCAGGGCAGGGCCATCTG CTTCTGTGTAGTTTTGTAACTATGCAGGGCAGGGCCATCTG < 41bp 0.417116259657541 0.822967917238609 0.28406227 0.31303054 prediction 0.645935834477218 Functional Gain - CCL17 ENSG00000102970 CDS Human protein_coding chr16:57449686 chr16:57449687 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_29164 0 0 0 0 1 exosome 0.438719369823958 0.438717591263703 0 0 hPsi_site_22888 iPseU_CNN:0;iRNA_PseU:0 22889 chr10 121436690 121436690 1 + G A UCEC 121436689 + 121436669 121436709 41 GGCAAGAAAAATGCTGGAAATGCAGAAGATCCCCACACAGA GGCAAGAAAAATGCTGGAAATACAGAAGATCCCCACACAGA < 41bp 0.512963419658106 0.83592964473675 0.34334487 0.6049386 prediction 0.645932450157288 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436689 chr10:121436690 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_29165 0 0 0 0 0 Nucleus 0.438767635176286 0.438721794791167 0.2098772 0 hPsi_site_22889 iPseU_CNN:0.2098772;iRNA_PseU:0 22890 chr10 70946250 70946250 1 + C A UCEC 70946249 + 70946229 70946269 41 TTAGAAATTATATTATGCAGTCTCATTCCCTGGATGTGGAC TTAGAAATTATATTATGCAGTATCATTCCCTGGATGTGGAC < 41bp 0.537258285615003 0.860222082207125 0.23076358 0.33248323 prediction 0.645927593184245 Functional Gain - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70946249 chr10:70946250 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_29166 0 0 1 0 1 Cytosol 0.438718324857858 0.438718483075198 0 0 hPsi_site_22890 iPseU_CNN:0;iRNA_PseU:0 22891 chr6 106555088 106555088 1 + C A UCEC 106555087 + 106555067 106555107 41 AGAAATCGAGAAGTTTGACATCAGTGACAATGCTGACCGGC AGAAATCGAGAAGTTTGACATAAGTGACAATGCTGACCGGC < 41bp 0.465746563551674 0.822960560895375 0.23418021 0.45542127 prediction 0.645921121790749 Functional Gain - PRDM1 ENSG00000057657 CDS Human protein_coding chr6:106555087 chr6:106555088 synonymous SNV . 0 22 hPsi_associated_SNPs_29167 0 0 0 0 0 cytosol 0.438707792485347 0.438669042529399 0 0 hPsi_site_22891 iPseU_CNN:0;iRNA_PseU:0 22892 chr12 31116785 31116785 1 + G A HNSC 31116784 + 31116764 31116804 41 GGGGGAGCAGCCGTCCTGGCTGTGGGCATCTGGACCCTGGT GGGGGAGCAGCCGTCCTGGCTATGGGCATCTGGACCCTGGT < 41bp 0.583982958966246 0.90694150941402 0.4268339 0.48504376 prediction 0.645917100895548 Functional Gain - TSPAN11 ENSG00000110900 CDS Human protein_coding chr12:31116784 chr12:31116785 nonsynonymous SNV 0.946 1 22 hPsi_associated_SNPs_29168 0 0 0 0 1 Cytosol 0.438718592990728 0.438718592844644 0 0 hPsi_site_22892 iPseU_CNN:0;iRNA_PseU:0 22893 chr3 100467337 100467337 1 + G T BRCA 100467336 + 100467316 100467356 41 GCGCGTAACCGTCCTCCCTTTGGTCAGGGCTATACCCAACC GCGCGTAACCGTCCTCCCTTTTGTCAGGGCTATACCCAACC < 41bp 0.496792941899489 0.822957447812823 0.30986983 0.58932716 prediction 0.645914895625646 Functional Gain - TFG ENSG00000114354 CDS Human protein_coding chr3:100467336 chr3:100467337 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29169 0 0 1 0 0 Cytosol 0.438718592995102 0.438718592995102 0.17865432 0 hPsi_site_22893 iPseU_CNN:0.17865432;iRNA_PseU:0 22894 chr14 61997242 61997242 1 + G A LUAD 61997241 + 61997221 61997261 41 GAGAACGAAGATGACCTCTTTGAGGCCATACTGAATGATGA GAGAACGAAGATGACCTCTTTAAGGCCATACTGAATGATGA < 41bp 0.405182069651087 0.822949891367662 0.29599953 0.3347487 prediction 0.645899782735324 Functional Gain - PRKCH ENSG00000027075;ENSG00000258989 CDS Human other chr14:61997241 chr14:61997242 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29170 0 0 0 0 1 Cytosol 0.438743677107063 0.438716182353147 0 0 hPsi_site_22894 iPseU_CNN:0;iRNA_PseU:0 22895 chr19 30313158 30313158 1 + C A UCEC 30313157 + 30313137 30313177 41 TTCTCCGTAGCTGTTGGATCTCTGTGTCCTGGATGTTGACT TTCTCCGTAGCTGTTGGATCTATGTGTCCTGGATGTTGACT < 41bp 0.452461304987238 0.822949436694214 0.20625126 0.34272468 prediction 0.645898873388428 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313157 chr19:30313158 synonymous SNV . 0 22 hPsi_associated_SNPs_29171 0 0 1 0 1 Ribosome 0.438711248773817 0.438809654000041 0 0 hPsi_site_22895 iPseU_CNN:0;iRNA_PseU:0 22896 chr9 107457074 107457074 1 + C A STAD 107457073 + 107457053 107457093 41 TATGTCTGAGAGAAAATCCATCTCCTTCATTGGCTGTGCTC TATGTCTGAGAGAAAATCCATATCCTTCATTGGCTGTGCTC < 41bp 0.485876587824559 0.822945938426744 0.2764115 0.2889948 prediction 0.645891876853488 Functional Gain - OR13D1 ENSG00000179055 CDS Human protein_coding chr9:107457073 chr9:107457074 synonymous SNV . 0 22 hPsi_associated_SNPs_29172 0 0 0 0 0 unknown 0.438718614861682 0.438728261125806 0 0 hPsi_site_22896 iPseU_CNN:0;iRNA_PseU:0 22897 chr5 179025742 179025742 1 + C A COAD 179025741 + 179025721 179025761 41 GAAAAAGAGCAAAGACAGGCTCTTCAGCGCGAATTACAGCA GAAAAAGAGCAAAGACAGGCTATTCAGCGCGAATTACAGCA < 41bp 0.454570967520068 0.822943845385271 0.30603054 0.42097813 prediction 0.645887690770542 Functional Gain - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179025741 chr5:179025742 nonsynonymous SNV 0.485 2 22 hPsi_associated_SNPs_29173 0 0 0 0 2 Ribosome 0.438596622446903 0.438718586263625 0 0 hPsi_site_22897 iPseU_CNN:0;iRNA_PseU:0 22898 chr16 70502847 70502847 1 + G A rs16970191 70502846 + 70502826 70502866 41 TGCCTGCACCTACCTAGGCTTGGACTCCGGAGCCCGGCCTG TGCCTGCACCTACCTAGGCTTAGACTCCGGAGCCCGGCCTG < 41bp 0.403123632813156 0.822940456510538 0.42186117 0.6948035 prediction 0.645880913021077 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70502846 chr16:70502847 synonymous SNV . 0 22 hPsi_associated_SNPs_29174 0 0 1 0 2 chromatin 0.438718592888768 0.43871859299525 0.389607 0 hPsi_site_22898 iPseU_CNN:0.389607;iRNA_PseU:0 22899 chrX 117959219 117959219 1 + C A UCEC 117959218 + 117959198 117959238 41 GTCGTCAGTCATGGCTAGCATCATTGCACGTGTCGGTAACA GTCGTCAGTCATGGCTAGCATAATTGCACGTGTCGGTAACA < 41bp 0.472951843077548 0.822939255572999 0.25611746 0.30185613 prediction 0.645878511145998 Functional Gain - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117959218 chrX:117959219 synonymous SNV . 0 22 hPsi_associated_SNPs_29175 0 0 1 0 0 exosome 0.438187331666442 0.438607386150272 0 0 hPsi_site_22899 iPseU_CNN:0;iRNA_PseU:0 22900 chr1 149871965 149871965 1 + C A UCEC 149871964 + 149871944 149871984 41 CCGCCCAGTGGAGAGAGAACTCTCAGCTGGACACTAGCCCC CCGCCCAGTGGAGAGAGAACTATCAGCTGGACACTAGCCCC < 41bp 0.525864289118911 0.848799397416813 0.5673873 0.67494124 prediction 0.645870216595805 Functional Gain - BOLA1 ENSG00000178096 CDS Human protein_coding chr1:149871964 chr1:149871965 nonsynonymous SNV 0.594 0 22 hPsi_associated_SNPs_29176 0 0 1 0 0 Ribosome 0.438361736437222 0.438992120248815 0.21510788 0 hPsi_site_22900 iPseU_CNN:0.21510788;iRNA_PseU:0 22901 chr13 45578515 45578515 1 + C A UCEC 45578514 + 45578494 45578534 41 ACAGCGATGAAGACAGTAGTTCTTTGTACGAAGAAGGAAAT ACAGCGATGAAGACAGTAGTTATTTGTACGAAGAAGGAAAT < 41bp 0.4746949321169 0.822928805788707 0.1827302 0.286027 prediction 0.645857611577414 Functional Gain - GPALPP1 ENSG00000133114 CDS Human protein_coding chr13:45578514 chr13:45578515 nonsynonymous SNV 0.952 1 22 hPsi_associated_SNPs_29177 0 0 1 2 2 cytosol 0.43872259415107 0.438683879977246 0 0 hPsi_site_22901 iPseU_CNN:0;iRNA_PseU:0 22902 chr20 2842263 2842263 1 + G T LIHC 2842262 + 2842242 2842282 41 GTGTATATGCTGCTCACAGGTGCAGCCGTCCTCGTAGCAAG GTGTATATGCTGCTCACAGGTTCAGCCGTCCTCGTAGCAAG < 41bp 0.513968674161643 0.836893391889497 0.16165799 0.37453908 prediction 0.645849435455708 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2842262 chr20:2842263 nonsynonymous SNV 0.975 3 22 hPsi_associated_SNPs_29178 0 0 0 0 2 chromatin 0.438710687337164 0.438715976892867 0 0 hPsi_site_22902 iPseU_CNN:0;iRNA_PseU:0 22903 chr15 29034097 29034097 1 + C A rs80308609 29034096 + 29034076 29034116 41 CCGGGCAGCCGCCGGCCACTTCAGGGGGGCCCGCCACTTCA CCGGGCAGCCGCCGGCCACTTAAGGGGGGCCCGCCACTTCA < 41bp 0.51195291317125 0.834872922282487 0.32354915 0.53280026 prediction 0.645840018222473 Functional Gain - LOC100289656 ENSG00000232431 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:29034096 chr15:29034097 . . 0 22 hPsi_associated_SNPs_29179 0 0 0 0 0 unknown 0.438713298996264 0.43871861359067 0.0656005200000001 0 hPsi_site_22903 iPseU_CNN:0.0656005200000001;iRNA_PseU:0 22904 chr7 99817536 99817536 1 + G A UCEC 99817535 + 99817515 99817555 41 AACATGAAGACTTCCTGCGATGAGAACAGAGGCACAGGTGC AACATGAAGACTTCCTGCGATAAGAACAGAGGCACAGGTGC < 41bp 0.425797391309915 0.822917296322878 0.3471467 0.41759595 prediction 0.645834592645757 Functional Gain - PVRIG ENSG00000213413 CDS Human protein_coding chr7:99817535 chr7:99817536 nonsynonymous SNV 0.678 1 22 hPsi_associated_SNPs_29180 0 0 0 0 0 exosome 0.434645899057266 0.443415809438949 0 0 hPsi_site_22904 iPseU_CNN:0;iRNA_PseU:0 22905 chr11 30358285 30358285 1 + G A STAD 30358284 + 30358264 30358304 41 CCGCTGTGACCGCAAGTGGCTGTATGAGCAAATTGAAATTG CCGCTGTGACCGCAAGTGGCTATATGAGCAAATTGAAATTG < 41bp 0.567752575674013 0.890667825251838 0.42897898 0.56531364 prediction 0.645830499155651 Functional Gain - ARL14EP ENSG00000152219 CDS Human protein_coding chr11:30358284 chr11:30358285 synonymous SNV . 0 22 hPsi_associated_SNPs_29181 0 0 1 0 0 chromatin 0.440060960502276 0.438990873569544 0.13062728 0 hPsi_site_22905 iPseU_CNN:0.13062728;iRNA_PseU:0 22906 chr1 177250038 177250038 1 + C A BLCA 177250037 + 177250017 177250057 41 GCCTTGTCCTTGCAGATCTGTCTCACCAAGAACAGCACCCT GCCTTGTCCTTGCAGATCTGTATCACCAAGAACAGCACCCT < 41bp 0.451718382551841 0.822910340662885 0.274019 0.48692468 prediction 0.64582068132577 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177250037 chr1:177250038 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_29182 0 0 0 0 0 Nucleus 0.438656592944621 0.4385588073336 0 0 hPsi_site_22906 iPseU_CNN:0;iRNA_PseU:0 22907 chr8 18257843 18257843 1 + G A UCEC 18257842 + 18257822 18257862 41 TGGCATGGTTCACCTTCTCCTGCAGGTGACCATTGACGGCA TGGCATGGTTCACCTTCTCCTACAGGTGACCATTGACGGCA < 41bp 0.415418016641167 0.822909945453545 0.2145133 0.25109962 prediction 0.645819890907091 Functional Gain - NAT2 ENSG00000156006 CDS Human protein_coding chr8:18257842 chr8:18257843 synonymous SNV . 0 22 hPsi_associated_SNPs_29183 0 0 0 0 0 exosome 0.438718594981771 0.438718592994981 0 0 hPsi_site_22907 iPseU_CNN:0;iRNA_PseU:0 22908 chr4 1316232 1316232 1 + G A CESC 1316231 + 1316211 1316251 41 GAGGAGTCCCTGGAGAGGCGTGAGACGGCCACCTGCCTGGC GAGGAGTCCCTGGAGAGGCGTAAGACGGCCACCTGCCTGGC < 41bp 0.584747121283917 0.907650720159121 0.30954838 0.4808327 prediction 0.645807197750409 Functional Gain - MAEA ENSG00000090316 CDS Human protein_coding chr4:1316231 chr4:1316232 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_29184 0 0 1 0 2 Cytosol 0.43858395350519 0.438718406699965 0 0 hPsi_site_22908 iPseU_CNN:0;iRNA_PseU:0 22909 chr3 186572002 186572002 1 + G A SKCM 186572001 + 186571981 186572021 41 GGTCCTAAGGGAGACATCGGTGAAACCGGAGTACCCGGGGC GGTCCTAAGGGAGACATCGGTAAAACCGGAGTACCCGGGGC < 41bp 0.447486288564318 0.822903020236432 0.6093301 0.71945906 prediction 0.645806040472864 Functional Gain - ADIPOQ ENSG00000181092 CDS Human protein_coding chr3:186572001 chr3:186572002 nonsynonymous SNV 0.656 1 22 hPsi_associated_SNPs_29185 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0.22025792 0 hPsi_site_22909 iPseU_CNN:0.22025792;iRNA_PseU:0 22910 chr18 76753340 76753340 1 + G A STAD 76753339 + 76753319 76753359 41 CAGGCGAGCGGCCCTTCAAGTGCAACATCTGCGGGAACCGC CAGGCGAGCGGCCCTTCAAGTACAACATCTGCGGGAACCGC < 41bp 0.57952869091287 0.902431138699418 0.26863056 0.70207536 prediction 0.645804895573096 Functional Gain - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76753339 chr18:76753340 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_29186 0 0 0 0 0 exosome 0.438719048384149 0.438718838704522 0.40415072 0 hPsi_site_22910 iPseU_CNN:0.40415072;iRNA_PseU:0 22911 chr10 122619762 122619762 1 + C A UCEC 122619761 + 122619741 122619781 41 CAGATAACATTCTTTCTTTTTCTTTTGACCCTTTTGATCCC CAGATAACATTCTTTCTTTTTATTTTGACCCTTTTGATCCC < 41bp 0.46200360115503 0.822901037094754 0.5534586 0.57156 prediction 0.645802074189508 Functional Gain - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122619761 chr10:122619762 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29187 0 0 1 0 1 Nucleus 0.438591786495797 0.438833916322412 0.0362027999999999 0 hPsi_site_22911 iPseU_CNN:0.0362027999999999;iRNA_PseU:0 22912 chr8 75924745 75924745 1 + G T LUSC 75924744 + 75924724 75924764 41 GGAACATGGACCTGCAAGCTTGCTTCCATCAATTGGACAGA GGAACATGGACCTGCAAGCTTTCTTCCATCAATTGGACAGA < 41bp 0.496264202645647 0.822894270392937 0.31580204 0.3686684 prediction 0.645788540785873 Functional Gain - CRISPLD1 ENSG00000121005 CDS Human protein_coding chr8:75924744 chr8:75924745 nonsynonymous SNV 0.677 4 22 hPsi_associated_SNPs_29188 0 0 1 0 2 Ribosome 0.438646311215666 0.438740816606902 0 0 hPsi_site_22912 iPseU_CNN:0;iRNA_PseU:0 22913 chr17 53844742 53844742 1 + G A rs112454522 53844741 + 53844721 53844761 41 TCTTTGGTGTTCTGGAGGACTGCTCACCAACTCTACTGGCA TCTTTGGTGTTCTGGAGGACTACTCACCAACTCTACTGGCA < 41bp 0.428171558590361 0.822886202487792 0.19511163 0.3046704 prediction 0.645772404975584 Functional Gain - PCTP ENSG00000141179 CDS Human protein_coding chr17:53844741 chr17:53844742 nonsynonymous SNV 0.008 4 22 hPsi_associated_SNPs_29189 0 0 1 0 2 Ribosome 0.438920093827345 0.438698605914112 0 0 hPsi_site_22913 iPseU_CNN:0;iRNA_PseU:0 22914 chr19 11145736 11145736 1 + G A UCEC 11145735 + 11145715 11145755 41 TGAGGAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCC TGAGGAGGAGGAGGAGAAGATATTCGGCCGTGGCTCCCGCC < 41bp 0.571359548022861 0.894245736429987 0.5865896 0.71463716 prediction 0.645772376814253 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145735 chr19:11145736 nonsynonymous SNV 0.993 1 22 hPsi_associated_SNPs_29190 0 0 1 0 0 Nucleus 0.438718593247648 0.438718594680372 0.25609512 0 hPsi_site_22914 iPseU_CNN:0.25609512;iRNA_PseU:0 22915 chr2 96076621 96076621 1 + G A UCEC 96076620 + 96076600 96076640 41 CTGCCCCCATAGGCCACAGATGCTATGGCCCACGTGGCCGG CTGCCCCCATAGGCCACAGATACTATGGCCCACGTGGCCGG < 41bp 0.406888591347535 0.822886084501283 0.2790268 0.41127867 prediction 0.645772169002566 Functional Gain - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96076620 chr2:96076621 nonsynonymous SNV 0.958 5 22 hPsi_associated_SNPs_29191 0 0 0 0 1 Ribosome 0.438718592994355 0.438718601731725 0 0 hPsi_site_22915 iPseU_CNN:0;iRNA_PseU:0 22916 chr15 66180110 66180110 1 + G A LUSC 66180109 + 66180089 66180129 41 GACATGTCTCCAAGCAACAATGTGGTTCCTATTCATGTTCC GACATGTCTCCAAGCAACAATATGGTTCCTATTCATGTTCC < 41bp 0.5638739323234 0.886759243286945 0.28232002 0.3666237 prediction 0.645770621927089 Functional Gain - RAB11A ENSG00000103769 CDS Human protein_coding chr15:66180109 chr15:66180110 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29192 0 0 1 1 2 Ribosome 0.438715212898511 0.4387184972997 0 0 hPsi_site_22916 iPseU_CNN:0;iRNA_PseU:0 22917 chr18 29126636 29126636 1 + C A UCEC 29126635 + 29126615 29126655 41 GTTTAGAGGAATCTGGTCATTCTAATTCTACCATAACCACA GTTTAGAGGAATCTGGTCATTATAATTCTACCATAACCACA < 41bp 0.532102036577487 0.854978068820586 0.30267894 0.5452089 prediction 0.645752064486197 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29126635 chr18:29126636 nonsynonymous SNV 0.902 1 22 hPsi_associated_SNPs_29193 0 0 1 0 0 Endoplasmic reticulum 0.438718573015086 0.43871350142323 0.0904178 0 hPsi_site_22917 iPseU_CNN:0.0904178;iRNA_PseU:0 22918 chr9 36671017 36671017 1 + C A UCEC 36671016 + 36670996 36671036 41 TGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGA TGCCGCTCAGTGGAATTGGATATCAACCAAGCACATATGGA < 41bp 0.534540632873863 0.857416294512617 0.6212058 0.70927584 prediction 0.645751323277508 Functional Gain - MELK ENSG00000165304 CDS Human protein_coding chr9:36671016 chr9:36671017 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29194 0 0 1 0 1 chromatin 0.439036669133314 0.438582108721318 0.17614008 0 hPsi_site_22918 iPseU_CNN:0.17614008;iRNA_PseU:0 22919 chr11 89885563 89885563 1 + G T LUAD 89885562 + 89885542 89885582 41 TACAGCCATATCCCAAAGGATGGAATCTTCCTGGAACTGCA TACAGCCATATCCCAAAGGATTGAATCTTCCTGGAACTGCA < 41bp 0.509827066959886 0.832692793245834 0.43395436 0.69742095 prediction 0.645731452571896 Functional Gain - NAALAD2 ENSG00000077616 CDS Human protein_coding chr11:89885562 chr11:89885563 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29195 0 0 1 0 2 insoluble cytoplasm 0.438718226045552 0.438734791365342 0.3948419 0 hPsi_site_22919 iPseU_CNN:0.3948419;iRNA_PseU:0 22920 chr4 39279794 39279794 1 + G A UCEC 39279793 + 39279773 39279813 41 ACTGGACGGTGTGTCCACATTGTGACTTCCCTGCTCTATAC ACTGGACGGTGTGTCCACATTATGACTTCCCTGCTCTATAC < 41bp 0.422892100079508 0.82286511010633 0.3632459 0.39713654 prediction 0.645730220212661 Functional Gain - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39279793 chr4:39279794 nonsynonymous SNV 0.956 5 22 hPsi_associated_SNPs_29196 0 0 1 0 1 Cytosol 0.447338228025847 0.439335940607546 0 0 hPsi_site_22920 iPseU_CNN:0;iRNA_PseU:0 22921 chr7 150554881 150554881 1 + C A UCEC 150554880 + 150554860 150554900 41 CTTTAAAGGTGGCTTCAACTTCTATGCGGGGCTGAAGGGCC CTTTAAAGGTGGCTTCAACTTATATGCGGGGCTGAAGGGCC < 41bp 0.548858439144852 0.871719643002065 0.40538967 0.620283 prediction 0.645722407714426 Functional Gain - AOC1 ENSG00000002726 CDS Human protein_coding chr7:150554880 chr7:150554881 nonsynonymous SNV 0.972 4 22 hPsi_associated_SNPs_29197 0 0 0 0 0 exosome 0.438718592995104 0.438718592995102 0.240566 0 hPsi_site_22921 iPseU_CNN:0.240566;iRNA_PseU:0 22922 chr17 27075334 27075334 1 + G A rs35932778 27075333 + 27075313 27075353 41 TACTGTGAGAATAAGTGTGGTGCCCGCATGATGCGGCGGCT TACTGTGAGAATAAGTGTGGTACCCGCATGATGCGGCGGCT < 41bp 0.576944193144805 0.899804350717004 0.29529223 0.710161 prediction 0.645720315144397 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075333 chr17:27075334 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29198 0 0 1 0 1 Ribosome 0.438745112478672 0.438649477282824 0.420322 0 hPsi_site_22922 iPseU_CNN:0.420322;iRNA_PseU:0 22923 chr11 43513602 43513602 1 + G A GBM 43513601 + 43513581 43513621 41 GATTAGCCTGGCCAACATCTTGCACAATGCCAAGCTCTGGA GATTAGCCTGGCCAACATCTTACACAATGCCAAGCTCTGGA < 41bp 0.401901362261866 0.822857806298414 0.23013416 0.6705225 prediction 0.645715612596828 Functional Gain - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43513601 chr11:43513602 synonymous SNV . 0 22 hPsi_associated_SNPs_29199 0 0 0 0 1 Nucleus 0.438721775628082 0.438720725071066 0.341045 0 hPsi_site_22923 iPseU_CNN:0.341045;iRNA_PseU:0 22924 chr6 33169612 33169612 1 + C A UCEC 33169611 + 33169591 33169631 41 AACTCTCCCCGGCATCGCTCTCTACTTCAGATCTTGCTCAG AACTCTCCCCGGCATCGCTCTATACTTCAGATCTTGCTCAG < 41bp 0.506915929473839 0.829765441995423 0.277759 0.6399815 prediction 0.645699025043168 Functional Gain - SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169611 chr6:33169612 nonsynonymous SNV 0.970 4 22 hPsi_associated_SNPs_29200 0 0 1 0 3 Ribosome 0.43871866253392 0.438721420626282 0.279963 0 hPsi_site_22924 iPseU_CNN:0.279963;iRNA_PseU:0 22925 chr11 1902699 1902699 1 + G T COAD 1902698 + 1902678 1902718 41 TCGGAGGCCCCTGAACTGGATGAGGACGAGGGCTTTGGCGA TCGGAGGCCCCTGAACTGGATTAGGACGAGGGCTTTGGCGA < 41bp 0.498884111915438 0.822847033913778 0.6755112 0.85723853 prediction 0.645694067827557 Functional Gain - LSP1 ENSG00000130592 CDS Human protein_coding chr11:1902698 chr11:1902699 stopgain 0.091 0 22 hPsi_associated_SNPs_29201 0 0 0 0 1 exosome 0.438718845829145 0.43871859158974 0.36345466 0 hPsi_site_22925 iPseU_CNN:0.36345466;iRNA_PseU:0 22926 chr17 35872617 35872617 1 + G A GBM 35872616 + 35872596 35872636 41 TAAAGTGCCTCTGGCTGACATGCCGCATGCCCCCATTGGAC TAAAGTGCCTCTGGCTGACATACCGCATGCCCCCATTGGAC < 41bp 0.580952169224401 0.90379391140439 0.26786372 0.40923706 prediction 0.645683484359978 Functional Gain - DUSP14 ENSG00000161326 CDS Human other chr17:35872616 chr17:35872617 nonsynonymous SNV 0.992 0 22 hPsi_associated_SNPs_29202 0 0 0 0 0 Endoplasmic reticulum 0.438736685761923 0.438716062869209 0 0 hPsi_site_22926 iPseU_CNN:0;iRNA_PseU:0 22927 chr6 41029088 41029088 1 + C A UCEC 41029087 + 41029067 41029107 41 AGAACGGCTGCCTGCCAACTTCTTTAAATTCCAGTTCCGGA AGAACGGCTGCCTGCCAACTTATTTAAATTCCAGTTCCGGA < 41bp 0.550345748661467 0.873186399660501 0.33985218 0.45687917 prediction 0.645681301998069 Functional Gain - APOBEC2 ENSG00000124701 CDS Human protein_coding chr6:41029087 chr6:41029088 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_29203 0 0 0 0 1 chromatin 0.442519452725637 0.438726573968121 0 0 hPsi_site_22927 iPseU_CNN:0;iRNA_PseU:0 22928 chr19 33167186 33167186 1 + G A LUSC 33167185 + 33167165 33167205 41 CCGCGATGGCGAGGGAGGAGTGCAAGGCGCTGCTGGACGGG CCGCGATGGCGAGGGAGGAGTACAAGGCGCTGCTGGACGGG < 41bp 0.427154024697611 0.822836798346127 0.3379854 0.74137807 prediction 0.645673596692253 Functional Gain - RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167185 chr19:33167186 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_29204 0 0 0 0 0 exosome 0.438723156846944 0.438718362907934 0.48275614 0 hPsi_site_22928 iPseU_CNN:0.48275614;iRNA_PseU:0 22929 chr11 65293753 65293753 1 + C A BLCA 65293752 + 65293732 65293772 41 GGGACCTCCCCGCAAGGGGATCCCCGAGCTTGAGCAGTATG GGGACCTCCCCGCAAGGGGATACCCGAGCTTGAGCAGTATG < 41bp 0.555577963594825 0.878411161902145 0.23086745 0.5028299 prediction 0.645666396614639 Functional Gain - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65293752 chr11:65293753 synonymous SNV . 0 22 hPsi_associated_SNPs_29205 0 0 1 0 1 Ribosome 0.438723914537127 0.438718581673124 0.0056598000000001 0 hPsi_site_22929 iPseU_CNN:0.0056598000000001;iRNA_PseU:0 22930 chr3 100413692 100413692 1 + G A UCEC 100413691 + 100413671 100413711 41 TATTGGGAGAAGGAAGTCATTGCCTTCAGTGACGCGGCCGA TATTGGGAGAAGGAAGTCATTACCTTCAGTGACGCGGCCGA < 41bp 0.569320294428053 0.892153256152124 0.4210572 0.5500576 prediction 0.645665923448143 Functional Gain - ADGRG7 ENSG00000144820 CDS Human protein_coding chr3:100413691 chr3:100413692 synonymous SNV . 0 22 hPsi_associated_SNPs_29206 0 0 0 0 0 exosome 0.438718570752751 0.439614300869718 0.1001152 0 hPsi_site_22930 iPseU_CNN:0.1001152;iRNA_PseU:0 22931 chr1 150485800 150485800 1 + G A HNSC 150485799 + 150485779 150485819 41 TGTTACCTGAGTCCTGGGGATGAACAGGTCAACTGCTTCAA TGTTACCTGAGTCCTGGGGATAAACAGGTCAACTGCTTCAA < 41bp 0.578603799206885 0.901436226861505 0.19099015 0.6149392 prediction 0.64566485530924 Functional Gain - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150485799 chr1:150485800 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_29207 0 0 1 0 1 Endoplasmic reticulum 0.438718747142785 0.438718638434886 0.2298784 0 hPsi_site_22931 iPseU_CNN:0.2298784;iRNA_PseU:0 22932 chr1 8395530 8395530 1 + G A SKCM 8395529 + 8395509 8395549 41 CTGCTCAACGGCGTGAAGTATGAGAGCGAGCTGACGGGCTC CTGCTCAACGGCGTGAAGTATAAGAGCGAGCTGACGGGCTC < 41bp 0.410387533365855 0.822831558239444 0.5081744 0.5606779 prediction 0.645663116478888 Functional Gain - SLC45A1 ENSG00000162426 CDS Human protein_coding chr1:8395529 chr1:8395530 nonsynonymous SNV 0.947 2 22 hPsi_associated_SNPs_29208 0 0 0 0 1 exosome 0.438518885862589 0.438638868200378 0.105007 0 hPsi_site_22932 iPseU_CNN:0.105007;iRNA_PseU:0 22933 chr17 43906649 43906649 1 + G A LUSC 43906648 + 43906628 43906668 41 GGGCCACTGTATCTCCCTGGTGGCCCTCCTGGTGGCCTTTG GGGCCACTGTATCTCCCTGGTAGCCCTCCTGGTGGCCTTTG < 41bp 0.523325065239148 0.846152091327384 0.15992633 0.32413906 prediction 0.645654052176473 Functional Gain - CRHR1;LINC02210-CRHR1 ENSG00000120088 CDS Human protein_coding chr17:43906648 chr17:43906649 synonymous SNV 1.000 0 22 hPsi_associated_SNPs_29209 0 0 0 0 2 unknown 0.438718602742989 0.438718593014401 0 0 hPsi_site_22933 iPseU_CNN:0;iRNA_PseU:0 22934 chr2 11312102 11312102 1 + C A GBM 11312101 + 11312081 11312121 41 AAGTTTGCACAGCTCCAGTGTCTGTGGAAGACGAGAGACTC AAGTTTGCACAGCTCCAGTGTATGTGGAAGACGAGAGACTC < 41bp 0.460630267266054 0.822826907998592 0.23152077 0.34922388 prediction 0.645653815997183 Functional Gain - PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11312101 chr2:11312102 nonsynonymous SNV 0.109 3 22 hPsi_associated_SNPs_29210 0 0 1 0 2 Ribosome 0.438784121120637 0.438718326798879 0 0 hPsi_site_22934 iPseU_CNN:0;iRNA_PseU:0 22935 chr19 17001153 17001153 1 + G A SKCM 17001152 + 17001132 17001172 41 AGTGGTGCTGGCCTCCGCCGTGGCCTTCTTCGTGCCCAGCA AGTGGTGCTGGCCTCCGCCGTAGCCTTCTTCGTGCCCAGCA < 41bp 0.405718495527236 0.822820909875967 0.38087097 0.68902254 prediction 0.645641819751934 Functional Gain - F2RL3 ENSG00000127533 CDS Human protein_coding chr19:17001152 chr19:17001153 synonymous SNV . 0 22 hPsi_associated_SNPs_29211 0 0 0 0 0 chromatin 0.439004599514607 0.438719265441235 0.37804508 0 hPsi_site_22935 iPseU_CNN:0.37804508;iRNA_PseU:0 22936 chr4 56734621 56734621 1 + G A SKCM 56734620 + 56734600 56734640 41 GAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGC GAAATAATGATGGAAGGCTGTAAATATGCAATCTCGAATGC < 41bp 0.416212134006559 0.822818313337909 0.21947625 0.4294369 prediction 0.645636626675817 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56734620 chr4:56734621 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_29212 0 0 1 0 1 Cytosol 0.436695494277667 0.43907510773387 0 0 hPsi_site_22936 iPseU_CNN:0;iRNA_PseU:0 22937 chr1 35873661 35873661 1 + G A BLCA 35873660 + 35873640 35873680 41 GTCCTGCACTTTTGCTGAGTTGAGTTTGGGCTTATGCCAGT GTCCTGCACTTTTGCTGAGTTAAGTTTGGGCTTATGCCAGT < 41bp 0.414996243563738 0.822816876128755 0.43863833 0.65463877 prediction 0.64563375225751 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35873660 chr1:35873661 synonymous SNV . 0 22 hPsi_associated_SNPs_29213 0 0 1 0 2 Cytosol 0.438971856468634 0.438675606685801 0.30927754 0 hPsi_site_22937 iPseU_CNN:0.30927754;iRNA_PseU:0 22938 chr19 45322921 45322921 1 + C A GBM 45322920 + 45322900 45322940 41 CCTGCTCCTCGTCGTTGCTGTCTTCTACTGCGTGAGACGCA CCTGCTCCTCGTCGTTGCTGTATTCTACTGCGTGAGACGCA < 41bp 0.546989883970061 0.869806193707582 0.3862967 0.8188752 prediction 0.645632619475043 Functional Gain - BCAM ENSG00000187244 CDS Human protein_coding chr19:45322920 chr19:45322921 synonymous SNV . 0 22 hPsi_associated_SNPs_29214 0 0 1 0 2 cytosol 0.438723941126596 0.438880812202159 0.6377504 0 hPsi_site_22938 iPseU_CNN:0.6377504;iRNA_PseU:0 22939 chr1 44436358 44436358 1 + C A STAD 44436357 + 44436337 44436377 41 ACAGGGTCAAAGATGTTCATTCTGGGTGACACAGCCTACGG ACAGGGTCAAAGATGTTCATTATGGGTGACACAGCCTACGG < 41bp 0.55610254999428 0.878914821665435 0.30272758 0.36542034 prediction 0.64562454334231 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44436357 chr1:44436358 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_29215 0 0 1 0 2 nucleolus 0.436658729011774 0.438429622771144 0 0 hPsi_site_22939 iPseU_CNN:0;iRNA_PseU:0 22940 chr3 142840260 142840260 1 + G T LUSC 142840259 + 142840239 142840279 41 ACGAGCCAGTGTGGCATGTATGGCAAAAACTGTATCCGGGG ACGAGCCAGTGTGGCATGTATTGCAAAAACTGTATCCGGGG < 41bp 0.491576778030173 0.822811253165589 0.35678214 0.55668664 prediction 0.645622506331179 Functional Gain - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840259 chr3:142840260 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_29216 0 0 0 0 0 cytosol 0.438718914067537 0.438718562424985 0.11337328 0 hPsi_site_22940 iPseU_CNN:0.11337328;iRNA_PseU:0 22941 chr3 111768729 111768729 1 + C A UCEC 111768728 + 111768708 111768748 41 GAACATTAATGTCATTTGTTTCTACAAATAATCTCATGTTG GAACATTAATGTCATTTGTTTATACAAATAATCTCATGTTG < 41bp 0.469527438466456 0.822807453026876 0.3154019 0.3938755 prediction 0.645614906053753 Functional Gain - TMPRSS7 ENSG00000176040 CDS Human protein_coding chr3:111768728 chr3:111768729 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29217 0 0 0 0 2 exosome 0.438846581448113 0.437717761955743 0 0 hPsi_site_22941 iPseU_CNN:0;iRNA_PseU:0 22942 chr2 209292976 209292976 1 + G A KIRC 209292975 + 209292955 209292995 41 GGAGCAGATTGTCCTTGTGCTGAAAGCGAAAGTACAATGTG GGAGCAGATTGTCCTTGTGCTAAAAGCGAAAGTACAATGTG < 41bp 0.572621108275484 0.895421901296601 0.24137387 0.5819157 prediction 0.645601586042233 Functional Gain - PTH2R ENSG00000144407 CDS Human protein_coding chr2:209292975 chr2:209292976 synonymous SNV . 0 22 hPsi_associated_SNPs_29218 0 0 0 0 2 exosome 0.438718593998647 0.438979016717463 0.1638314 0 hPsi_site_22942 iPseU_CNN:0.1638314;iRNA_PseU:0 22943 chr1 6052581 6052581 1 + G A rs806109 6052580 + 6052560 6052600 41 TCAGAGCCCAAGTCGAGGGCTGCGCTTTGCGAGCGCCAGCC TCAGAGCCCAAGTCGAGGGCTACGCTTTGCGAGCGCCAGCC < 41bp 0.434293156695679 0.822793313645318 0.33109707 0.62483174 prediction 0.645586627290635 Functional Gain - KCNAB2 ENSG00000069424 UTR5 Human protein_coding chr1:6052580 chr1:6052581 . . 0 22 hPsi_associated_SNPs_29219 0 0 0 0 0 Ribosome 0.438718528408601 0.43872830876947 0.24966348 0 hPsi_site_22943 iPseU_CNN:0.24966348;iRNA_PseU:0 22944 chr3 157154760 157154760 1 + C A UCEC 157154759 + 157154739 157154779 41 TTCTGTTTTGTGCTCTCTGGTCTGCAGTGTTGGCCGAGAAC TTCTGTTTTGTGCTCTCTGGTATGCAGTGTTGGCCGAGAAC < 41bp 0.47718334731435 0.822793096827753 0.1674363 0.29367065 prediction 0.645586193655506 Functional Gain - PTX3 ENSG00000163661 CDS Human protein_coding chr3:157154759 chr3:157154760 nonsynonymous SNV 0.538 0 22 hPsi_associated_SNPs_29220 0 0 0 0 1 exosome 0.438718593538208 0.438718565646776 0 0 hPsi_site_22944 iPseU_CNN:0;iRNA_PseU:0 22945 chr19 51361366 51361366 1 + C A HNSC 51361365 + 51361345 51361385 41 ATTTCAGGTCAGCCACAGCTTCCCACACCCGCTCTACGATA ATTTCAGGTCAGCCACAGCTTACCACACCCGCTCTACGATA < 41bp 0.549533273686876 0.872324566107724 0.59597635 0.8098623 prediction 0.645582584841697 Functional Gain - KLK3 ENSG00000142515 CDS Human protein_coding chr19:51361365 chr19:51361366 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_29221 0 0 0 0 1 Cytosol 0.438718642454261 0.438732753973505 0.4277719 0 hPsi_site_22945 iPseU_CNN:0.4277719;iRNA_PseU:0 22946 chr17 7251514 7251514 1 + G A SKCM 7251513 + 7251493 7251533 41 CCGCGTGGAGGCCATGGCAGTGAAGAAACCAGGGCCCAGCT CCGCGTGGAGGCCATGGCAGTAAAGAAACCAGGGCCCAGCT < 41bp 0.395167052790833 0.822775751769849 0.52997464 0.71322644 prediction 0.645551503539699 Functional Gain - ACAP1 ENSG00000072818 CDS Human protein_coding chr17:7251513 chr17:7251514 synonymous SNV . 0 22 hPsi_associated_SNPs_29222 0 0 0 0 2 nucleus 0.438718601703268 0.438715244874613 0.3665036 0 hPsi_site_22946 iPseU_CNN:0.3665036;iRNA_PseU:0 22947 chr11 55418911 55418911 1 + G A LUAD 55418910 + 55418890 55418930 41 GAGATAGATCACTACTTTTGTGATGTTCACCCTGTGTTGAA GAGATAGATCACTACTTTTGTAATGTTCACCCTGTGTTGAA < 41bp 0.430508616602949 0.822773993637528 0.23021191 0.3664236 prediction 0.645547987275056 Functional Gain - OR4S2 ENSG00000174982 CDS Human protein_coding chr11:55418910 chr11:55418911 nonsynonymous SNV 0.928 4 22 hPsi_associated_SNPs_29223 0 0 0 0 0 unknown 0.438718720186974 0.438774565810694 0 0 hPsi_site_22947 iPseU_CNN:0;iRNA_PseU:0 22948 chr1 248263598 248263598 1 + C A UCEC 248263597 + 248263577 248263617 41 GAGGAGAGTGTTTGGGATATTCTCTTTCCTGAAAGAATAAT GAGGAGAGTGTTTGGGATATTATCTTTCCTGAAAGAATAAT < 41bp 0.508495267628677 0.831268887661207 0.29895428 0.519771 prediction 0.64554724006506 Functional Gain - OR2L13 ENSG00000196071 CDS Human protein_coding chr1:248263597 chr1:248263598 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29224 0 0 0 0 0 Nucleus 0.438718581059571 0.43871859299706 0.039542 0 hPsi_site_22948 iPseU_CNN:0.039542;iRNA_PseU:0 22949 chr7 155559274 155559274 1 + G A GBM 155559273 + 155559253 155559293 41 CAAGCCCCAGCCCTGCGTGGTGTCTGTGGAGGGGCTGTCCT CAAGCCCCAGCCCTGCGTGGTATCTGTGGAGGGGCTGTCCT < 41bp 0.398956757958021 0.82277237665573 0.32501018 0.70568615 prediction 0.645544753311459 Functional Gain - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155559273 chr7:155559274 synonymous SNV . 0 22 hPsi_associated_SNPs_29225 0 0 1 0 1 Nucleus 0.438718625111734 0.438718593860568 0.4113723 0 hPsi_site_22949 iPseU_CNN:0.4113723;iRNA_PseU:0 22950 chr1 177250597 177250597 1 + C A LUSC 177250596 + 177250576 177250616 41 AGGTGGGCAGGATCCAGTCCTCCCTGAGGGCTTTCAATTCT AGGTGGGCAGGATCCAGTCCTACCTGAGGGCTTTCAATTCT < 41bp 0.4538839591283 0.822772149074238 0.2949605 0.90475684 prediction 0.645544298148476 Functional Gain - BRINP2 ENSG00000198797 CDS Human protein_coding chr1:177250596 chr1:177250597 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29226 0 0 0 0 0 Nucleus 0.438718592995101 0.438718589907273 0.80951368 0 hPsi_site_22950 iPseU_CNN:0.80951368;iRNA_PseU:0 22951 chr16 57116404 57116404 1 + C A COAD 57116403 + 57116383 57116423 41 GCCCAGGCTGGACTTTGCCTTCTTTGACAACCAGCCCCAGG GCCCAGGCTGGACTTTGCCTTATTTGACAACCAGCCCCAGG < 41bp 0.4694630224362 0.822761427194823 0.7019685 0.8391503 prediction 0.645522854389646 Functional Gain - NLRC5 ENSG00000140853 CDS Human protein_coding chr16:57116403 chr16:57116404 nonsynonymous SNV 0.223 0 22 hPsi_associated_SNPs_29227 0 0 0 0 1 Ribosome 0.438718592525665 0.438718499043593 0.2743636 0 hPsi_site_22951 iPseU_CNN:0.2743636;iRNA_PseU:0 22952 chr11 4928768 4928768 1 + G A SKCM 4928767 + 4928747 4928787 41 AAGACAGAGCCCTCGCTTCATGAGCCCATGTATTATTTCCT AAGACAGAGCCCTCGCTTCATAAGCCCATGTATTATTTCCT < 41bp 0.436783018250504 0.822761107564805 0.07742512 0.12568954 prediction 0.64552221512961 Functional Gain - OR51A7 ENSG00000176895 CDS Human protein_coding chr11:4928767 chr11:4928768 nonsynonymous SNV 0.949 1 22 hPsi_associated_SNPs_29228 0 0 0 0 0 exosome 0.438719206113284 0.43871853373462 0 0 hPsi_site_22952 iPseU_CNN:0;iRNA_PseU:0 22953 chrX 153040491 153040491 1 + G A CHOL 153040490 + 153040470 153040510 41 GGCCAGGGGAGGACGGCCACTGTGCCACTGTGCGCCAGGGC GGCCAGGGGAGGACGGCCACTATGCCACTGTGCGCCAGGGC < 41bp 0.407957038593538 0.822758651844553 0.4513874 0.52196556 prediction 0.645517303689105 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153040490 chrX:153040491 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_29229 0 0 0 0 1 Endoplasmic reticulum 0.438823457196986 0.438843482206419 0.0439311200000001 0 hPsi_site_22953 iPseU_CNN:0.0439311200000001;iRNA_PseU:0 22954 chr16 4382305 4382305 1 + C A THCA 4382304 + 4382284 4382324 41 GCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGTATCA GCACTCCCTGGACGAGCCGCTAGACCTGAAGCTGAGTATCA < 41bp 0.523770810784786 0.846528682154174 0.117914975 0.28728887 prediction 0.645515742738775 Functional Gain - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4382304 chr16:4382305 synonymous SNV . 0 22 hPsi_associated_SNPs_29230 0 0 1 0 0 Endoplasmic reticulum 0.440548807529444 0.438715138305241 0 0 hPsi_site_22954 iPseU_CNN:0;iRNA_PseU:0 22955 chr14 20824756 20824756 1 + C A UCEC 20824755 + 20824735 20824775 41 TGGCTTTTCCTTAGGATGCTTCTATGGCATGGTTCCAGGAT TGGCTTTTCCTTAGGATGCTTATATGGCATGGTTCCAGGAT < 41bp 0.466151911210766 0.822755917583443 0.2558696 0.33958906 prediction 0.645511835166886 Functional Gain - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20824755 chr14:20824756 nonsynonymous SNV 0.974 4 22 hPsi_associated_SNPs_29231 0 0 1 0 2 Cytosol 0.43872285992337 0.438718592984099 0 0 hPsi_site_22955 iPseU_CNN:0;iRNA_PseU:0 22956 chrX 114540996 114540996 1 + C A UCEC 114540995 + 114540975 114541015 41 ATCATCCCCAATATGAGAGATCTCATGGCCAATACAAGAGA ATCATCCCCAATATGAGAGATATCATGGCCAATACAAGAGA < 41bp 0.476813047239578 0.822746091034421 0.25293058 0.305183 prediction 0.645492182068841 Functional Gain - LUZP4 ENSG00000102021 CDS Human protein_coding chrX:114540995 chrX:114540996 nonsynonymous SNV 0.015 1 22 hPsi_associated_SNPs_29232 0 0 0 0 0 unknown 0.439577735604079 0.456596615051135 0 0 hPsi_site_22956 iPseU_CNN:0;iRNA_PseU:0 22957 chr7 39832477 39832477 1 + G A UCEC 39832476 + 39832456 39832496 41 TTGGGCCTCCCGGCGACCTCTGCAGGCCCAAGTCGTCCTGA TTGGGCCTCCCGGCGACCTCTACAGGCCCAAGTCGTCCTGA < 41bp 0.546935687887119 0.869680063716724 0.3842878 0.8704282 prediction 0.645488751659211 Functional Gain - LINC00265 ENSG00000188185 ncRNA_exonic Human lincRNA chr7:39832476 chr7:39832477 . . 0 22 hPsi_associated_SNPs_29233 0 0 0 0 0 unknown 0.438716823459433 0.43871859299613 0.7408564 0 hPsi_site_22957 iPseU_CNN:0.7408564;iRNA_PseU:0 22958 chr10 114044355 114044355 1 + G A SKCM 114044354 + 114044334 114044374 41 AAAATCCCCGAGTGTCCCTATGGATGGGAAGTTCATCAGCT AAAATCCCCGAGTGTCCCTATAGATGGGAAGTTCATCAGCT < 41bp 0.40162943380423 0.822742647420688 0.43072402 0.49763557 prediction 0.645485294841377 Functional Gain - TECTB ENSG00000119913 CDS Human protein_coding chr10:114044354 chr10:114044355 nonsynonymous SNV 0.999 5 22 hPsi_associated_SNPs_29234 0 0 0 0 1 unknown 0.438718593499707 0.438718592995102 0 0 hPsi_site_22958 iPseU_CNN:0;iRNA_PseU:0 22959 chr19 1462045 1462045 1 + G A rs145756927 1462044 + 1462024 1462064 41 CAAGGCGGCCATCTGCCAGGTGGATGGCGCCCTGGGCTTCC CAAGGCGGCCATCTGCCAGGTAGATGGCGCCCTGGGCTTCC < 41bp 0.400158588306228 0.822740935198347 0.26271752 0.6153125 prediction 0.645481870396693 Functional Gain - APC2 ENSG00000115266 CDS Human protein_coding chr19:1462044 chr19:1462045 synonymous SNV . 0 22 hPsi_associated_SNPs_29235 0 0 0 0 1 nucleolus 0.4377334064437 0.438718610695314 0.230625 0 hPsi_site_22959 iPseU_CNN:0.230625;iRNA_PseU:0 22960 chr2 175287727 175287727 1 + C A rs34170959 175287726 + 175287706 175287746 41 TTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCAC TTTCTATTTTACCTCAAGACTACAGCCTTCCTTGCATTCAC < 41bp 0.466440636933125 0.822735934933127 0.287291 0.40275455 prediction 0.645471869866255 Functional Gain - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175287726 chr2:175287727 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_29236 0 0 1 0 1 exosome 0.43871859298396 0.438718607095671 0 0 hPsi_site_22960 iPseU_CNN:0;iRNA_PseU:0 22961 chr14 101498332 101498332 1 + G A BLCA 101498331 + 101498311 101498351 41 TGCTGACGTGCGGTACTTAATGAGAAGTTGCCCGTGTTTTT TGCTGACGTGCGGTACTTAATAAGAAGTTGCCCGTGTTTTT < 41bp 0.509411707406954 0.832140688763842 0.54240453 0.60218084 prediction 0.645457962713777 Functional Gain - MIR543 ENSG00000212040 ncRNA_exonic Human miRNA chr14:101498331 chr14:101498332 . . 0 22 hPsi_associated_SNPs_29237 0 0 0 0 0 unknown 0.438704722117867 0.438710906519604 0.11955262 0 hPsi_site_22961 iPseU_CNN:0.11955262;iRNA_PseU:0 22962 chr22 45243920 45243920 1 + C A rs139004299 45243919 + 45243899 45243939 41 CGTCCGCGAGATCCAGAGGCTCTACAACCAAGGTGAGGGTG CGTCCGCGAGATCCAGAGGCTATACAACCAAGGTGAGGGTG < 41bp 0.456486956228388 0.822725955405088 0.33839935 0.36092198 prediction 0.645451910810176 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45243919 chr22:45243920 synonymous SNV . 0 22 hPsi_associated_SNPs_29238 0 0 0 0 2 unknown 0.43866342490548 0.438719230697781 0 0 hPsi_site_22962 iPseU_CNN:0;iRNA_PseU:0 22963 chr1 248112738 248112738 1 + C A rs60155834 248112737 + 248112717 248112757 41 GGCCTGCATGGACACCTGGGTCTATGAGGGCACAGTGTTTT GGCCTGCATGGACACCTGGGTATATGAGGGCACAGTGTTTT < 41bp 0.523024154323232 0.845748191009848 0.73217225 0.80556405 prediction 0.645448073373231 Functional Gain - OR2L8 ENSG00000196936 CDS Human other chr1:248112737 chr1:248112738 synonymous SNV . 0 22 hPsi_associated_SNPs_29239 0 0 0 0 0 unknown 0.438719068330418 0.438718669794018 0.1467836 0 hPsi_site_22963 iPseU_CNN:0.1467836;iRNA_PseU:0 22964 chr19 42821921 42821921 1 + G T LUAD 42821920 + 42821900 42821940 41 CCGGCCGGCTACGGGCTCATTGGACTGCAGGTGGCGGCCTA CCGGCCGGCTACGGGCTCATTTGACTGCAGGTGGCGGCCTA < 41bp 0.526086724402485 0.848808084811814 0.4127734 0.43373784 prediction 0.645442720818658 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42821920 chr19:42821921 stopgain 0.992 1 22 hPsi_associated_SNPs_29240 0 0 0 0 1 nucleoplasm 0.438718597466018 0.438718593270194 0 0 hPsi_site_22964 iPseU_CNN:0;iRNA_PseU:0 22965 chr8 39782841 39782841 1 + C A UCEC 39782840 + 39782820 39782860 41 CAGTGCAGGCCAAAGCAGCGTCTTTCAGTGCTTTGACGTCC CAGTGCAGGCCAAAGCAGCGTATTTCAGTGCTTTGACGTCC < 41bp 0.556893126574196 0.879613500260324 0.428124 0.50112474 prediction 0.645440747372256 Functional Gain - IDO1 ENSG00000131203 CDS Human protein_coding chr8:39782840 chr8:39782841 synonymous SNV . 0 22 hPsi_associated_SNPs_29241 0 0 0 0 2 Cytosol 0.445044744471483 0.438566581543028 0.00224947999999991 0 hPsi_site_22965 iPseU_CNN:0.00224947999999991;iRNA_PseU:0 22966 chr8 79629615 79629615 1 + G A SKCM 79629614 + 79629594 79629634 41 GGTGGAAATATTAAAGGCATTGAAGGACATTCACCTGGAAA GGTGGAAATATTAAAGGCATTAAAGGACATTCACCTGGAAA < 41bp 0.44274796944769 0.822719511395753 0.24689901 0.27474093 prediction 0.645439022791506 Functional Gain - ZC2HC1A ENSG00000104427 CDS Human protein_coding chr8:79629614 chr8:79629615 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_29242 0 0 1 0 1 cytosol 0.438715245058402 0.43872547899836 0 0 hPsi_site_22966 iPseU_CNN:0;iRNA_PseU:0 22967 chr19 16060228 16060228 1 + G A CESC 16060227 + 16060207 16060247 41 ACTGCGTTACAATGTGCTCATGAGCCCCCGTGACTGTGCCC ACTGCGTTACAATGTGCTCATAAGCCCCCGTGACTGTGCCC < 41bp 0.569165717463114 0.891879336724064 0.17466334 0.30115867 prediction 0.6454272385219 Functional Gain - OR10H4 ENSG00000176231 CDS Human protein_coding chr19:16060227 chr19:16060228 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_29243 0 0 0 0 0 unknown 0.437808769359046 0.436431419321572 0 0 hPsi_site_22967 iPseU_CNN:0;iRNA_PseU:0 22968 chr17 58013598 58013598 1 + C A UCEC 58013597 + 58013577 58013617 41 TGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCT TGCTGAAAAGAAATGCTGCTTATCGTCTGGGAGCTGGTCCT < 41bp 0.468547986527629 0.822711715970014 0.25171113 0.21792233 prediction 0.645423431940028 Functional Gain - RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58013597 chr17:58013598 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29244 0 0 1 0 2 Ribosome 0.438712506983976 0.438718589462944 0 0 hPsi_site_22968 iPseU_CNN:0;iRNA_PseU:0 22969 chr16 20935419 20935419 1 + C A UCEC 20935418 + 20935398 20935438 41 CCAAACCAGTATATCTCAGATCTCATGATGAAGTTTCCTAA CCAAACCAGTATATCTCAGATATCATGATGAAGTTTCCTAA < 41bp 0.482886546263488 0.822702777896898 0.24431813 0.2692536 prediction 0.645405555793795 Functional Gain - LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20935418 chr16:20935419 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29245 0 0 0 0 1 Ribosome 0.438713615568033 0.439913850570842 0 0 hPsi_site_22969 iPseU_CNN:0;iRNA_PseU:0 22970 chr19 504864 504864 1 + G A SKCM 504863 + 504843 504883 41 AAACGCTGCCGGCACCTGGCTGAGGACGACACCCACCCACC AAACGCTGCCGGCACCTGGCTAAGGACGACACCCACCCACC < 41bp 0.574981986481809 0.897677313700711 0.71243566 0.96761626 prediction 0.645390654437805 Functional Gain - MADCAM1 ENSG00000099866 CDS Human protein_coding chr19:504863 chr19:504864 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_29246 0 0 0 0 0 cytosol 0.438396345885253 0.438718592872692 0.5103612 0 hPsi_site_22970 iPseU_CNN:0.5103612;iRNA_PseU:0 22971 chrX 37029216 37029216 1 + C A UCEC 37029215 + 37029195 37029235 41 CGAAATGGATGAGGTCAAATTCTTCTCACAGGAAAAAGACT CGAAATGGATGAGGTCAAATTATTCTCACAGGAAAAAGACT < 41bp 0.485025160991136 0.82269443012729 0.58001304 0.69100106 prediction 0.64538886025458 Functional Gain - FAM47C ENSG00000198173 CDS Human protein_coding chrX:37029215 chrX:37029216 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29247 0 0 0 0 0 unknown 0.438718914046226 0.438716882726589 0.22197604 0 hPsi_site_22971 iPseU_CNN:0.22197604;iRNA_PseU:0 22972 chr4 56290771 56290771 1 + G T LGG 56290770 + 56290750 56290790 41 TGCACGGGATTGGCAGTAATTGGAGGAAGAATGATAGCACA TGCACGGGATTGGCAGTAATTTGAGGAAGAATGATAGCACA < 41bp 0.488056331910479 0.822686228431869 0.29818606 0.37578085 prediction 0.645372456863737 Functional Gain - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56290770 chr4:56290771 stopgain 0.985 1 22 hPsi_associated_SNPs_29248 0 0 1 0 2 Ribosome 0.438718899598202 0.438444918841419 0 0 hPsi_site_22972 iPseU_CNN:0;iRNA_PseU:0 22973 chr16 844081 844081 1 + G A UCEC 844080 + 844060 844100 41 TGTGGGCCAGGACCCCGCCCTGCCTGCTGACACACTCCTGC TGTGGGCCAGGACCCCGCCCTACCTGCTGACACACTCCTGC < 41bp 0.407134913121869 0.822679788967926 0.16233003 0.37004292 prediction 0.645359577935852 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:844080 chr16:844081 synonymous SNV . 0 22 hPsi_associated_SNPs_29249 0 0 1 0 1 Nucleus 0.438718145331687 0.438715175357556 0 0 hPsi_site_22973 iPseU_CNN:0;iRNA_PseU:0 22974 chr5 140023749 140023749 1 + G A KIRC 140023748 + 140023728 140023768 41 GATTGAGCCTCTCTTACAGCTGTTGCCAGTATCTAACGTGG GATTGAGCCTCTCTTACAGCTATTGCCAGTATCTAACGTGG < 41bp 0.40609617330687 0.822678575109103 0.16454434 0.22034413 prediction 0.645357150218207 Functional Gain - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140023748 chr5:140023749 synonymous SNV . 0 22 hPsi_associated_SNPs_29250 0 0 1 0 2 chromatin 0.438718593358901 0.438718593203889 0 0 hPsi_site_22974 iPseU_CNN:0;iRNA_PseU:0 22975 chr1 176759013 176759013 1 + G A LIHC 176759012 + 176758992 176759032 41 GCAGCTGCATTCCTGTGGTGTGTGAGCCACCCCCTCCTGTG GCAGCTGCATTCCTGTGGTGTATGAGCCACCCCCTCCTGTG < 41bp 0.419966290440202 0.822678404302225 0.34683186 0.58280814 prediction 0.645356808604451 Functional Gain - PAPPA2 ENSG00000116183 CDS Human protein_coding chr1:176759012 chr1:176759013 nonsynonymous SNV 0.788 5 22 hPsi_associated_SNPs_29251 0 0 0 0 1 Cytosol 0.438447335648897 0.438712396843598 0.16561628 0 hPsi_site_22975 iPseU_CNN:0.16561628;iRNA_PseU:0 22976 chr11 64854837 64854837 1 + C A KIRC 64854836 + 64854816 64854856 41 TGATGACCGGACACCAGGCCTCCATGGAGACTGTGACGATG TGATGACCGGACACCAGGCCTACATGGAGACTGTGACGATG < 41bp 0.448183327316886 0.822672855078496 0.27848446 0.68178666 prediction 0.645345710156991 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64854836 chr11:64854837 synonymous SNV . 0 22 hPsi_associated_SNPs_29252 0 0 1 0 2 Ribosome 0.438699527409732 0.436051867910998 0.36357332 0 hPsi_site_22976 iPseU_CNN:0.36357332;iRNA_PseU:0 22977 chr20 17956500 17956500 1 + G A BRCA 17956499 + 17956479 17956519 41 CTTGAAAGTGCTGTTCAACATGAAACCTTAAACTATATAGG CTTGAAAGTGCTGTTCAACATAAAACCTTAAACTATATAGG < 41bp 0.419084934438348 0.822668081366629 0.11738992 0.1852499 prediction 0.645336162733259 Functional Gain - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17956499 chr20:17956500 nonsynonymous SNV 0.944 0 22 hPsi_associated_SNPs_29253 0 0 1 0 1 chromatin 0.438708540073021 0.43873107752415 0 0 hPsi_site_22977 iPseU_CNN:0;iRNA_PseU:0 22978 chr19 34859592 34859592 1 + G T UCEC 34859591 + 34859571 34859611 41 CAACAAGGTTCTGGACAAGATGAAGTCTTTCTGCCAGGTAA CAACAAGGTTCTGGACAAGATTAAGTCTTTCTGCCAGGTAA < 41bp 0.500669093665942 0.823336756262179 0.3428173 0.355888 prediction 0.645335325192475 Functional Gain - GPI ENSG00000105220 CDS Human protein_coding chr19:34859591 chr19:34859592 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29254 0 0 1 0 1 Ribosome 0.438718380781566 0.438718592993794 0 0 hPsi_site_22978 iPseU_CNN:0;iRNA_PseU:0 22979 chrX 129318396 129318396 1 + C A LGG 129318395 + 129318375 129318415 41 CACCAACCTCAAAATGTGGATCCAAGAATGCAATGGGCATG CACCAACCTCAAAATGTGGATACAAGAATGCAATGGGCATG < 41bp 0.535476749806568 0.858144193431308 0.2994877 0.5833277 prediction 0.645334887249482 Functional Gain - RAB33A ENSG00000134594 CDS Human protein_coding chrX:129318395 chrX:129318396 synonymous SNV . 0 22 hPsi_associated_SNPs_29255 0 0 0 0 0 exosome 0.438614904463266 0.43863884381363 0.1666554 0 hPsi_site_22979 iPseU_CNN:0.1666554;iRNA_PseU:0 22980 chr10 118969634 118969634 1 + G A GBM 118969633 + 118969613 118969653 41 ACACTCACCACCATTGGGTTTGGGGATACTGTTTTAGAACA ACACTCACCACCATTGGGTTTAGGGATACTGTTTTAGAACA < 41bp 0.416512902818864 0.822667259518845 0.28941298 0.42689374 prediction 0.645334519037691 Functional Gain - KCNK18 ENSG00000186795 CDS Human protein_coding chr10:118969633 chr10:118969634 nonsynonymous SNV 0.990 5 22 hPsi_associated_SNPs_29256 0 0 0 0 0 unknown 0.438718940354662 0.438720839076914 0 0 hPsi_site_22980 iPseU_CNN:0;iRNA_PseU:0 22981 chr6 117589564 117589564 1 + G T LUAD 117589563 + 117589543 117589583 41 GACATCAGCTCCGTGGTGGATGAACATTTCAGCAGGGCCCT GACATCAGCTCCGTGGTGGATTAACATTTCAGCAGGGCCCT < 41bp 0.509106491060855 0.831771209326137 0.4155172 0.55071676 prediction 0.645329436530563 Functional Gain - VGLL2 ENSG00000170162 CDS Human protein_coding chr6:117589563 chr6:117589564 stopgain 0.994 1 22 hPsi_associated_SNPs_29257 0 0 0 0 1 exosome 0.438714282388736 0.438718553511664 0.10143352 0 hPsi_site_22981 iPseU_CNN:0.10143352;iRNA_PseU:0 22982 chr19 7986367 7986367 1 + G A LUSC 7986366 + 7986346 7986386 41 CCGGGAGGCCATTCAGAAAGTGCATCCGGGTGGCCTTCAGG CCGGGAGGCCATTCAGAAAGTACATCCGGGTGGCCTTCAGG < 41bp 0.580122843196514 0.90278621604647 0.28587627 0.41295025 prediction 0.645326745699913 Functional Gain - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7986366 chr19:7986367 synonymous SNV . 0 22 hPsi_associated_SNPs_29258 0 0 1 0 2 Ribosome 0.438718592995062 0.438718592971883 0 0 hPsi_site_22982 iPseU_CNN:0;iRNA_PseU:0 22983 chr1 171118798 171118798 1 + C A COAD 171118797 + 171118777 171118817 41 GTTACCCGCTTTGCATCCTTTCTCCGGAATGTCCTTCCTTC GTTACCCGCTTTGCATCCTTTATCCGGAATGTCCTTCCTTC < 41bp 0.450977723537027 0.822659028713975 0.2723327 0.48707935 prediction 0.64531805742795 Functional Gain - FMO6P ENSG00000117507 CDS Human transcribed_unitary_pseudogene chr1:171118797 chr1:171118798 nonsynonymous SNV 0.495 1 22 hPsi_associated_SNPs_29259 0 0 0 0 1 unknown 0.43871859299508 0.439187377512843 0 0 hPsi_site_22983 iPseU_CNN:0;iRNA_PseU:0 22984 chr12 120110126 120110126 1 + C A UCEC 120110125 + 120110105 120110145 41 GGCACCAGAGAAGGAGGAATTCCTGGCCTGGCAGCATGATC GGCACCAGAGAAGGAGGAATTACTGGCCTGGCAGCATGATC < 41bp 0.541091817258486 0.863749472298965 0.19049278 0.31237578 prediction 0.645315310080957 Functional Gain - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120110125 chr12:120110126 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29260 0 0 1 0 1 Ribosome 0.438718592995096 0.438718592324657 0 0 hPsi_site_22984 iPseU_CNN:0;iRNA_PseU:0 22985 chr7 129760673 129760673 1 + G A BLCA 129760672 + 129760652 129760692 41 ACGGCAATGACGTCCATGTGTGTAATGTGAAGTATAAGAGA ACGGCAATGACGTCCATGTGTATAATGTGAAGTATAAGAGA < 41bp 0.405781906343166 0.822657107436237 0.22709408 0.22058937 prediction 0.645314214872474 Functional Gain - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129760672 chr7:129760673 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_29261 0 0 1 0 2 Cytosol 0.438611185069242 0.438717182764049 0 0 hPsi_site_22985 iPseU_CNN:0;iRNA_PseU:0 22986 chr1 153750818 153750818 1 + C A CESC 153750817 + 153750797 153750837 41 GGGGCGCTGTGGGGCGTGCTTCCTGGCTTTACAAGGTGAGG GGGGCGCTGTGGGGCGTGCTTACTGGCTTTACAAGGTGAGG < 41bp 0.468030873951034 0.822654289013852 0.39208537 0.5654517 prediction 0.645308578027704 Functional Gain - SLC27A3 ENSG00000143554 CDS Human protein_coding chr1:153750817 chr1:153750818 nonsynonymous SNV 0.913 4 22 hPsi_associated_SNPs_29262 0 0 0 0 1 nucleoplasm 0.438718592969778 0.438718592996153 0.1309034 0 hPsi_site_22986 iPseU_CNN:0.1309034;iRNA_PseU:0 22987 chr15 75108845 75108845 1 + C A LUSC 75108844 + 75108824 75108864 41 TTCGTGGGACGGCATCGGGATCTTCTTTGACTCTCCGGCAG TTCGTGGGACGGCATCGGGATATTCTTTGACTCTCCGGCAG < 41bp 0.546901269309264 0.869554051901479 0.6621543 0.8555886 prediction 0.64530556518443 Functional Gain - LMAN1L ENSG00000140506 CDS Human protein_coding chr15:75108844 chr15:75108845 synonymous SNV . 0 22 hPsi_associated_SNPs_29263 0 0 0 0 2 Endoplasmic reticulum 0.438718116635757 0.438718074298167 0.3868686 0 hPsi_site_22987 iPseU_CNN:0.3868686;iRNA_PseU:0 22988 chr1 76363679 76363679 1 + C A UCEC 76363678 + 76363658 76363698 41 GAAAACATGCATTTTGAAGTTCAACATGTAAAGAATACCTC GAAAACATGCATTTTGAAGTTAAACATGTAAAGAATACCTC < 41bp 0.478981644923312 0.822650904684193 0.49123585 0.6746717 prediction 0.645301809368386 Functional Gain - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76363678 chr1:76363679 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29264 0 0 0 0 2 exosome 0.438742504122285 0.438721404663088 0.3493434 0 hPsi_site_22988 iPseU_CNN:0.3493434;iRNA_PseU:0 22989 chr10 75550808 75550808 1 + G A CESC 75550807 + 75550787 75550827 41 GGCATGTCTGCTGCGCCCTCTGAGGGGCCGTGAGCCAGAGG GGCATGTCTGCTGCGCCCTCTAAGGGGCCGTGAGCCAGAGG < 41bp 0.403845285776281 0.822649759381475 0.33531696 0.71862936 prediction 0.645299518762949 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75550807 chr10:75550808 synonymous SNV . 0 22 hPsi_associated_SNPs_29265 0 0 1 0 1 Cytosol 0.438511261738067 0.438783406941576 0.43725872 0 hPsi_site_22989 iPseU_CNN:0.43725872;iRNA_PseU:0 22990 chr1 152671385 152671385 1 + G A rs80271068 152671384 + 152671364 152671404 41 AAAGTCGCACTGAGATGTCCTGCCAGCAAAACCAGCAGCAG AAAGTCGCACTGAGATGTCCTACCAGCAAAACCAGCAGCAG < 41bp 0.562628788763488 0.885274696580747 0.19624454 0.4939126 prediction 0.645291815634519 Functional Gain - LCE2A ENSG00000187173 CDS Human protein_coding chr1:152671384 chr1:152671385 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_29266 0 0 0 0 1 unknown 0.438718790983083 0.438716618127482 0 0 hPsi_site_22990 iPseU_CNN:0;iRNA_PseU:0 22991 chrX 75650001 75650001 1 + C A ESCA 75650000 + 75649980 75650020 41 CCTGAGGCACACACCTACATTCTGTTAAACAAACTGGGACC CCTGAGGCACACACCTACATTATGTTAAACAAACTGGGACC < 41bp 0.543753407587889 0.866394252489287 0.29706612 0.4135385 prediction 0.645281689802795 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75650000 chrX:75650001 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_29267 0 0 0 0 0 membrane 0.438718180218596 0.438722708738369 0 0 hPsi_site_22991 iPseU_CNN:0;iRNA_PseU:0 22992 chr2 26501588 26501588 1 + G A UCEC 26501587 + 26501567 26501607 41 AAGGAAAATGAGAAAACTGATGCTTGATCTCAATAAGGCCA AAGGAAAATGAGAAAACTGATACTTGATCTCAATAAGGCCA < 41bp 0.411440248860567 0.822640603270618 0.27794045 0.60321397 prediction 0.645281206541237 Functional Gain - HADHB ENSG00000138029 CDS Human protein_coding chr2:26501587 chr2:26501588 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29268 0 0 1 0 1 Ribosome 0.438956913496354 0.438759464214988 0.20642794 0 hPsi_site_22992 iPseU_CNN:0.20642794;iRNA_PseU:0 22993 chr7 76054372 76054372 1 + G A rs2286428 76054371 + 76054351 76054391 41 CCCCTCTGGCTCTTGCAGGGTGGAGCCAGCCATCCTGAGAC CCCCTCTGGCTCTTGCAGGGTAGAGCCAGCCATCCTGAGAC < 41bp 0.417662402878937 0.822635636250252 0.3287886 0.6899196 prediction 0.645271272500504 Functional Gain - ZP3 ENSG00000188372 CDS Human protein_coding chr7:76054371 chr7:76054372 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_29269 0 0 0 0 1 Ribosome 0.438718550583706 0.438718593257545 0.3798392 0 hPsi_site_22993 iPseU_CNN:0.3798392;iRNA_PseU:0 22994 chrX 21886608 21886608 1 + G A UCEC 21886607 + 21886587 21886627 41 ATCTGGCATAATTTTGTCCTTGCACTCTTGGGTATTTTAGC ATCTGGCATAATTTTGTCCTTACACTCTTGGGTATTTTAGC < 41bp 0.569432576637167 0.892067649609877 0.44152477 0.5730456 prediction 0.645270145945421 Functional Gain - MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21886607 chrX:21886608 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29270 0 0 0 0 2 Endoplasmic reticulum 0.438547262155595 0.438979230209941 0.1460912 0 hPsi_site_22994 iPseU_CNN:0.1460912;iRNA_PseU:0 22995 chr9 125424805 125424805 1 + C A STAD 125424804 + 125424784 125424824 41 TCCAACTATACTGTCAAGGATCAAATAGCAACAATTATCTA TCCAACTATACTGTCAAGGATAAAATAGCAACAATTATCTA < 41bp 0.510362825234041 0.832994916039733 0.6190191 0.63881654 prediction 0.645264181611383 Functional Gain - OR1L1 ENSG00000173679 CDS Human protein_coding chr9:125424804 chr9:125424805 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_29271 0 0 0 0 0 unknown 0.438583013173582 0.438717401351882 0.0395948799999999 0 hPsi_site_22995 iPseU_CNN:0.0395948799999999;iRNA_PseU:0 22996 chr15 83492023 83492023 1 + C A SARC 83492022 + 83492002 83492042 41 GGATCTGTGCCAAAAGAGCCTCTCTCCGGAGTAGAAAGGTA GGATCTGTGCCAAAAGAGCCTATCTCCGGAGTAGAAAGGTA < 41bp 0.547300749329339 0.869928711742981 0.33772546 0.7174566 prediction 0.645255924827285 Functional Gain - WHAMM ENSG00000156232 CDS Human protein_coding chr15:83492022 chr15:83492023 nonsynonymous SNV 0.133 0 22 hPsi_associated_SNPs_29272 0 0 0 0 1 Nucleus 0.438718592995102 0.438718592995102 0.4349132 0 hPsi_site_22996 iPseU_CNN:0.4349132;iRNA_PseU:0 22997 chr3 43743777 43743777 1 + C A COAD 43743776 + 43743756 43743796 41 TAAAATATGGACACTGAAGTTCTCTCATAATATTTCAAATA TAAAATATGGACACTGAAGTTATCTCATAATATTTCAAATA < 41bp 0.478780564783504 0.822615499718099 0.32211876 0.3573804 prediction 0.645230999436198 Functional Gain - ABHD5 ENSG00000011198 CDS Human protein_coding chr3:43743776 chr3:43743777 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_29273 0 0 1 0 1 Ribosome 0.438718572963634 0.43871555349644 0 0 hPsi_site_22997 iPseU_CNN:0;iRNA_PseU:0 22998 chr19 39214657 39214657 1 + G A COAD 39214656 + 39214636 39214676 41 GGCCCCCTTCAACAACTGGATGGAGAGCGCCATGGAGGACC GGCCCCCTTCAACAACTGGATAGAGAGCGCCATGGAGGACC < 41bp 0.394915532509983 0.822614378009469 0.22418109 0.3273185 prediction 0.645228756018938 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39214656 chr19:39214657 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29274 0 0 0 0 2 Nucleus 0.438719793937781 0.438718553993943 0 0 hPsi_site_22998 iPseU_CNN:0;iRNA_PseU:0 22999 chr7 99008785 99008785 1 + G T UCEC 99008784 + 99008764 99008804 41 TTGATTGAGCCAACACTGGATGAATTAGATCAAAAGATGAG TTGATTGAGCCAACACTGGATTAATTAGATCAAAAGATGAG < 41bp 0.50977604739901 0.832382963393182 0.31793118 0.40471154 prediction 0.645213831988344 Functional Gain - BUD31 ENSG00000106245 CDS Human protein_coding chr7:99008784 chr7:99008785 stopgain 1.000 1 22 hPsi_associated_SNPs_29275 0 0 1 0 2 Ribosome 0.438705795260263 0.438593499652572 0 0 hPsi_site_22999 iPseU_CNN:0;iRNA_PseU:0 23000 chrX 140994037 140994037 1 + C A rs176045 140994036 + 140994016 140994056 41 TTCTCCTCCACTTTAGTGAGTCTTTTCCAGAGTTCCCCTGA TTCTCCTCCACTTTAGTGAGTATTTTCCAGAGTTCCCCTGA < 41bp 0.467753921606734 0.822606899559051 0.24859357 0.35058495 prediction 0.645213799118102 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994036 chrX:140994037 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29276 0 0 0 0 0 exosome 0.438718523147873 0.438728550953642 0 0 hPsi_site_23000 iPseU_CNN:0;iRNA_PseU:0 23001 chr12 102046970 102046970 1 + G T KIRP 102046969 + 102046949 102046989 41 GCAGGAAACAAGCTTCGTCTTGAGATCCCCATCAGCGGAGA GCAGGAAACAAGCTTCGTCTTTAGATCCCCATCAGCGGAGA < 41bp 0.500396251285987 0.823001567886459 0.515131 0.88286716 prediction 0.645210633200944 Functional Gain - MYBPC1 ENSG00000196091 CDS Human protein_coding chr12:102046969 chr12:102046970 stopgain 0.995 1 22 hPsi_associated_SNPs_29277 0 0 0 0 2 nucleus 0.438718611802569 0.438718592995759 0.73547232 0 hPsi_site_23001 iPseU_CNN:0.73547232;iRNA_PseU:0 23002 chr3 159706922 159706922 1 + G A COAD 159706921 + 159706901 159706941 41 CTGCATCCAGCGGCTCGCCCTGTGTCCCTGCAGTGCCGGCT CTGCATCCAGCGGCTCGCCCTATGTCCCTGCAGTGCCGGCT < 41bp 0.429233246697352 0.822588043831896 0.22586027 0.28810978 prediction 0.645176087663792 Functional Gain - IL12A ENSG00000168811 CDS Human protein_coding chr3:159706921 chr3:159706922 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29278 0 0 0 0 1 exosome 0.438448661866016 0.438721355759779 0 0 hPsi_site_23002 iPseU_CNN:0;iRNA_PseU:0 23003 chr2 149837968 149837968 1 + C A UCEC 149837967 + 149837947 149837987 41 AAGGATGAGGTGAAAGAAGTTCTCCAGGCCCTGGAGGAGCT AAGGATGAGGTGAAAGAAGTTATCCAGGCCCTGGAGGAGCT < 41bp 0.452621901504405 0.822582523907739 0.23145533 0.27000374 prediction 0.645165047815478 Functional Gain - KIF5C ENSG00000168280 CDS Human protein_coding chr2:149837967 chr2:149837968 nonsynonymous SNV 0.998 5 22 hPsi_associated_SNPs_29279 0 0 1 0 1 exosome 0.438718592995103 0.438718592994504 0 0 hPsi_site_23003 iPseU_CNN:0;iRNA_PseU:0 23004 chr20 56140113 56140113 1 + G A GBM 56140112 + 56140092 56140132 41 AAAGGTGTCCCTCTAGTCTATGAAGCTCTCAGCTGGCAACA AAAGGTGTCCCTCTAGTCTATAAAGCTCTCAGCTGGCAACA < 41bp 0.402165842652629 0.822576791991647 0.29135048 0.5880177 prediction 0.645153583983294 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140112 chr20:56140113 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_29280 0 0 1 0 2 exosome 0.438705758836585 0.437401049177837 0.1760354 0 hPsi_site_23004 iPseU_CNN:0.1760354;iRNA_PseU:0 23005 chr9 2718696 2718696 1 + G A rs141378856 2718695 + 2718675 2718715 41 CTTCACGCTCGAGTACCTGCTGCGCCTAGCCTCCACGCCCG CTTCACGCTCGAGTACCTGCTACGCCTAGCCTCCACGCCCG < 41bp 0.413104107039043 0.822567757769159 0.26557502 0.67670316 prediction 0.645135515538318 Functional Gain - KCNV2 ENSG00000168263 CDS Human protein_coding chr9:2718695 chr9:2718696 synonymous SNV . 0 22 hPsi_associated_SNPs_29281 1 0 0 0 0 insoluble cytoplasm 0.43871231565768 0.438716847767369 0.35340632 0 hPsi_site_23005 iPseU_CNN:0.35340632;iRNA_PseU:0 23006 chr8 145583752 145583752 1 + G A LUAD 145583751 + 145583731 145583771 41 CAGCACCTTCTTCTGGGCACTGACTGCCCTTCTGGTCGCTT CAGCACCTTCTTCTGGGCACTAACTGCCCTTCTGGTCGCTT < 41bp 0.412260970326698 0.822562233488912 0.2133038 0.5136081 prediction 0.645124466977824 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583751 chr8:145583752 synonymous SNV . 0 22 hPsi_associated_SNPs_29282 0 0 1 0 0 Ribosome 0.438694708636602 0.438710682621752 0.0272162 0 hPsi_site_23006 iPseU_CNN:0.0272162;iRNA_PseU:0 23007 chr19 37966847 37966847 1 + C A READ 37966846 + 37966826 37966866 41 AGGAATGGGATTGTCTGGATTCTTCTCAAAGACATCTGTAC AGGAATGGGATTGTCTGGATTATTCTCAAAGACATCTGTAC < 41bp 0.545706368641482 0.868268317813832 0.24654362 0.2835527 prediction 0.645123898344699 Functional Gain - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37966846 chr19:37966847 nonsynonymous SNV 0.006 1 22 hPsi_associated_SNPs_29283 0 0 1 0 2 exosome 0.438711910704736 0.438632808124055 0 0 hPsi_site_23007 iPseU_CNN:0;iRNA_PseU:0 23008 chrX 140994683 140994683 1 + C A HNSC 140994682 + 140994662 140994702 41 TATTGAGTCTTTTCCAGAGTTCCCCTGAGTGTACTCAAAGT TATTGAGTCTTTTCCAGAGTTACCCTGAGTGTACTCAAAGT < 41bp 0.477422312813002 0.822561495126488 0.11309281 0.24216062 prediction 0.645122990252977 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994682 chrX:140994683 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_29284 0 0 0 0 0 exosome 0.43871361844939 0.43860067643772 0 0 hPsi_site_23008 iPseU_CNN:0;iRNA_PseU:0 23009 chr8 22972220 22972220 1 + G A rs150502977 22972219 + 22972199 22972239 41 TGTAACCCGTGCACAGAGGGTGTGGATTACACCAACGCTTC TGTAACCCGTGCACAGAGGGTATGGATTACACCAACGCTTC < 41bp 0.409114876705186 0.822560099162257 0.29563743 0.7798755 prediction 0.645120198324515 Functional Gain - TNFRSF10C ENSG00000173535 CDS Human protein_coding chr8:22972219 chr8:22972220 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_29285 0 0 0 0 2 exosome 0.438715690608092 0.438541428580881 0.559751 0 hPsi_site_23009 iPseU_CNN:0.559751;iRNA_PseU:0 23010 chr15 91432858 91432858 1 + G A LGG 91432857 + 91432837 91432877 41 CGAGCTGACTGTGGAGAGCGTGCAGCACACGTGGGTGGTGG CGAGCTGACTGTGGAGAGCGTACAGCACACGTGGGTGGTGG < 41bp 0.411748566055812 0.822559473888372 0.65264165 0.92444175 prediction 0.645118947776745 Functional Gain - FES ENSG00000182511 CDS Human protein_coding chr15:91432857 chr15:91432858 synonymous SNV . 0 22 hPsi_associated_SNPs_29286 0 0 0 0 1 cytosol 0.438756212885477 0.438697306800192 0.5436002 0 hPsi_site_23010 iPseU_CNN:0.5436002;iRNA_PseU:0 23011 chr11 10524403 10524403 1 + C A UCEC 10524402 + 10524382 10524422 41 CACAAGGGACTGCATGTTTCTCTTTCCACCGATGACCCCAT CACAAGGGACTGCATGTTTCTATTTCCACCGATGACCCCAT < 41bp 0.447030324326776 0.822542721396146 0.2804298 0.32865077 prediction 0.645085442792291 Functional Gain - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10524402 chr11:10524403 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_29287 0 0 0 0 1 Cytosol 0.438718531413091 0.438712177651343 0 0 hPsi_site_23011 iPseU_CNN:0;iRNA_PseU:0 23012 chr15 101447434 101447434 1 + C A UCEC 101447433 + 101447413 101447453 41 GCAGCCGTGTTCACAAAAAATCTCGACAAAGCCCTGAAGTT GCAGCCGTGTTCACAAAAAATATCGACAAAGCCCTGAAGTT < 41bp 0.550671954083078 0.873206492816574 0.3726008 0.6790974 prediction 0.645069077466992 Functional Gain - ALDH1A3 ENSG00000184254 CDS Human protein_coding chr15:101447433 chr15:101447434 nonsynonymous SNV 0.983 0 22 hPsi_associated_SNPs_29288 0 0 0 0 1 Nucleus 0.438718210283326 0.438825430095756 0.3581948 0 hPsi_site_23012 iPseU_CNN:0.3581948;iRNA_PseU:0 23013 chr7 99956449 99956449 1 + G A UCEC 99956448 + 99956428 99956468 41 GTTAGCCATAGTTCCCAACGTGAGAATATCCTGGAGACGGG GTTAGCCATAGTTCCCAACGTAAGAATATCCTGGAGACGGG < 41bp 0.398844450300469 0.822534406118008 0.1758984 0.24855831 prediction 0.645068812236017 Functional Gain - PILRB ENSG00000121716 CDS Human protein_coding chr7:99956448 chr7:99956449 synonymous SNV . 0 22 hPsi_associated_SNPs_29289 0 0 1 0 0 Cytosol 0.438718361571211 0.438718639376428 0 0 hPsi_site_23013 iPseU_CNN:0;iRNA_PseU:0 23014 chr16 227392 227392 1 + G A BLCA 227391 + 227371 227411 41 GGCTTCTGTGAGCACCGTGCTGACCTCCAAATACCGTTAAG GGCTTCTGTGAGCACCGTGCTAACCTCCAAATACCGTTAAG < 41bp 0.571911153639371 0.894444637044844 0.4959111 0.88361484 prediction 0.645066966810945 Functional Gain - HBA1 ENSG00000206172 CDS Human protein_coding chr16:227391 chr16:227392 synonymous SNV . 0 22 hPsi_associated_SNPs_29290 0 0 1 0 0 Ribosome 0.438689908032466 0.438718592995101 0.76722968 0 hPsi_site_23014 iPseU_CNN:0.76722968;iRNA_PseU:0 23015 chr3 53213691 53213691 1 + G A rs151061939 53213690 + 53213670 53213710 41 GAGGGGCGCGTCATCCAGATTGTGCTAATGCGGGCAGCAGA GAGGGGCGCGTCATCCAGATTATGCTAATGCGGGCAGCAGA < 41bp 0.588086485551384 0.910618377925221 0.33508748 0.43282652 prediction 0.645063784747673 Functional Gain - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53213690 chr3:53213691 nonsynonymous SNV 0.979 2 22 hPsi_associated_SNPs_29291 0 0 0 0 1 Cytosol 0.438718615992796 0.438718635303677 0 0 hPsi_site_23015 iPseU_CNN:0;iRNA_PseU:0 23016 chr9 84605805 84605805 1 + C A KIRC 84605804 + 84605784 84605824 41 TAAGAGAGCAACTGCTGATATCCAGCAACTGCTGTCTTGGG TAAGAGAGCAACTGCTGATATACAGCAACTGCTGTCTTGGG < 41bp 0.463567507077065 0.822528701956215 0.33853966 0.62433803 prediction 0.645057403912429 Functional Gain - SPATA31D1 ENSG00000214929 CDS Human protein_coding chr9:84605804 chr9:84605805 synonymous SNV . 0 22 hPsi_associated_SNPs_29292 0 0 0 0 0 exosome 0.438721023278734 0.43868857778907 0.24867606 0 hPsi_site_23016 iPseU_CNN:0.24867606;iRNA_PseU:0 23017 chr22 18217178 18217178 1 + C A rs115649437 18217177 + 18217157 18217197 41 ATGTTGTGGTCACAGGAGTTTCCTGTTCACAGCAATGTGTG ATGTTGTGGTCACAGGAGTTTACTGTTCACAGCAATGTGTG < 41bp 0.521681971648327 0.844204090583083 0.2415888 0.49809885 prediction 0.645044237869513 Functional Gain - BID ENSG00000015475 UTR3 Human protein_coding chr22:18217177 chr22:18217178 . . 0 22 hPsi_associated_SNPs_29293 0 0 0 0 0 Ribosome 0.438812272872846 0.439142088742066 0 0 hPsi_site_23017 iPseU_CNN:0;iRNA_PseU:0 23018 chr12 8052222 8052222 1 + G A rs7313213 8052221 + 8052201 8052241 41 AAAACTCTATTGAGGCTGGGTGTGGTGGCTCACACCTGTAA AAAACTCTATTGAGGCTGGGTATGGTGGCTCACACCTGTAA < 41bp 0.471759979338208 0.822522027556679 0.29124463 0.44308785 prediction 0.645044055113358 Functional Gain - SLC2A14;SLC2A3 ENSG00000176654 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr12:8052221 chr12:8052222 . . 0 22 hPsi_associated_SNPs_29294 0 0 0 0 0 unknown 0.438718726729787 0.438718592984376 0 0 hPsi_site_23018 iPseU_CNN:0;iRNA_PseU:0 23019 chr11 62381902 62381902 1 + G A LUAD 62381901 + 62381881 62381921 41 CTCTGGGCCCAAGGGTGCCATGAGGTGCTGCTGGAGCACTT CTCTGGGCCCAAGGGTGCCATAAGGTGCTGCTGGAGCACTT < 41bp 0.402793895435708 0.822520353971881 0.1791453 0.20492613 prediction 0.645040707943762 Functional Gain - ROM1 ENSG00000149489 CDS Human protein_coding chr11:62381901 chr11:62381902 nonsynonymous SNV 0.873 1 22 hPsi_associated_SNPs_29295 0 0 0 0 1 Endoplasmic reticulum 0.438718743965578 0.438718678057293 0 0 hPsi_site_23019 iPseU_CNN:0;iRNA_PseU:0 23020 chr16 87436610 87436610 1 + C A UCEC 87436609 + 87436589 87436629 41 GGTCAGCGTCTCCACACCAATCTCAGAGGTGTATGAGAGTG GGTCAGCGTCTCCACACCAATATCAGAGGTGTATGAGAGTG < 41bp 0.47046932487623 0.822515646154299 0.28157818 0.4088431 prediction 0.645031292308598 Functional Gain - MAP1LC3B ENSG00000140941 CDS Human protein_coding chr16:87436609 chr16:87436610 synonymous SNV . 0 22 hPsi_associated_SNPs_29296 0 0 0 0 2 Ribosome 0.438718630168744 0.438737458649999 0 0 hPsi_site_23020 iPseU_CNN:0;iRNA_PseU:0 23021 chrX 152806914 152806914 1 + G A LGG 152806913 + 152806893 152806933 41 CAAGACCTTCCTGCAGCTGGTGTGGGAGGCCCTGCAGGACG CAAGACCTTCCTGCAGCTGGTATGGGAGGCCCTGCAGGACG < 41bp 0.39336293973233 0.822511925242073 0.26449633 0.646876 prediction 0.645023850484146 Functional Gain - ATP2B3 ENSG00000067842 CDS Human protein_coding chrX:152806913 chrX:152806914 synonymous SNV . 0 22 hPsi_associated_SNPs_29297 0 0 0 0 1 exosome 0.438718592995094 0.438718592995092 0.293752 0 hPsi_site_23021 iPseU_CNN:0.293752;iRNA_PseU:0 23022 chr17 6352705 6352705 1 + G T UCEC 6352704 + 6352684 6352724 41 AAGCTGTCCCAAGAGCTAGATGAAGCCATTATGGCGGAAGA AAGCTGTCCCAAGAGCTAGATTAAGCCATTATGGCGGAAGA < 41bp 0.496487578298423 0.822503982326757 0.24769947 0.30998498 prediction 0.645007964653515 Functional Gain - PIMREG ENSG00000129195 CDS Human protein_coding chr17:6352704 chr17:6352705 stopgain 0.409 0 22 hPsi_associated_SNPs_29298 0 0 0 2 2 unknown 0.438703477630536 0.440774542909941 0 0 hPsi_site_23022 iPseU_CNN:0;iRNA_PseU:0 23023 chr10 104392084 104392084 1 + G A rs540579682 104392083 + 104392063 104392103 41 GTAAGGCAGGAGGAAGTGGGTGAGCTCCGAGATGATGAGCA GTAAGGCAGGAGGAAGTGGGTAAGCTCCGAGATGATGAGCA < 41bp 0.551299343933278 0.873801483204581 0.70502007 0.8969153 prediction 0.645004278542606 Functional Gain - SUFU ENSG00000107882 UTR3 Human protein_coding chr10:104392083 chr10:104392084 . . 0 22 hPsi_associated_SNPs_29299 1 0 0 0 0 chromatin 0.438718762443237 0.438726924147362 0.38379046 0 hPsi_site_23023 iPseU_CNN:0.38379046;iRNA_PseU:0 23024 chrX 47978936 47978936 1 + G A UCEC 47978935 + 47978915 47978955 41 GGACCCAAAAGGGGGAAACATGCCTGGACCCACAGACTGCG GGACCCAAAAGGGGGAAACATACCTGGACCCACAGACTGCG < 41bp 0.447466581816723 0.822501901130217 0.24077517 0.46039027 prediction 0.645003802260434 Functional Gain - SSX6 ENSG00000171483 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:47978935 chrX:47978936 . . 0 22 hPsi_associated_SNPs_29300 0 0 0 0 1 unknown 0.438721275311845 0.438721316006142 0 0 hPsi_site_23024 iPseU_CNN:0;iRNA_PseU:0 23025 chr17 72920943 72920943 1 + G A SKCM 72920942 + 72920922 72920962 41 GCTCACTGCGATGATGCTGCTGGCAACGCTCTGGATCCTCT GCTCACTGCGATGATGCTGCTAGCAACGCTCTGGATCCTCT < 41bp 0.404584818186236 0.822500280302335 0.20118183 0.34865755 prediction 0.64500056060467 Functional Gain - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72920942 chr17:72920943 synonymous SNV . 0 22 hPsi_associated_SNPs_29301 0 0 0 0 1 exosome 0.441672995618076 0.433763774531739 0 0 hPsi_site_23025 iPseU_CNN:0;iRNA_PseU:0 23026 chr11 43419005 43419005 1 + C A UCEC 43419004 + 43418984 43419024 41 AGCTCTGGATGACAGTGACTTCTTCACCAGCTATTACACTT AGCTCTGGATGACAGTGACTTATTCACCAGCTATTACACTT < 41bp 0.456929974401734 0.822499432419719 0.22424906 0.37530044 prediction 0.644998864839439 Functional Gain - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43419004 chr11:43419005 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29302 0 0 1 0 1 Nucleus 0.437737634536323 0.439492536020894 0 0 hPsi_site_23026 iPseU_CNN:0;iRNA_PseU:0 23027 chr19 14513455 14513455 1 + G T LUAD 14513454 + 14513434 14513474 41 CATCCAGAACATGACGACATTGCTGGCCAATGCCTCCTTGA CATCCAGAACATGACGACATTTCTGGCCAATGCCTCCTTGA < 41bp 0.483336346082597 0.822498749106067 0.2772702 0.60247564 prediction 0.644997498212133 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14513454 chr19:14513455 nonsynonymous SNV 0.024 2 22 hPsi_associated_SNPs_29303 0 0 1 0 1 Cytosol 0.441786798949008 0.4280392571706 0.20495128 0 hPsi_site_23027 iPseU_CNN:0.20495128;iRNA_PseU:0 23028 chr11 56468071 56468071 1 + C A UCEC 56468070 + 56468050 56468090 41 GGAAATCTGTCGTTTCTGGATCTCTGGTATTCTTCTGTCTA GGAAATCTGTCGTTTCTGGATATCTGGTATTCTTCTGTCTA < 41bp 0.487102721200049 0.822497960013743 0.67219293 0.6286007 prediction 0.644995920027486 Functional Gain - OR9G1;OR9G9 ENSG00000174914 CDS Human protein_coding chr11:56468070 chr11:56468071 nonsynonymous SNV 0.564 0 22 hPsi_associated_SNPs_29304 0 0 0 0 0 unknown 0.438723824475536 0.438718875318305 0 0 hPsi_site_23028 iPseU_CNN:0;iRNA_PseU:0 23029 chr1 248525583 248525583 1 + G A LUSC 248525582 + 248525562 248525602 41 ATGAGATTTTCATGTACTTGTGCTGTGTCCTCATGCTCCTC ATGAGATTTTCATGTACTTGTACTGTGTCCTCATGCTCCTC < 41bp 0.436978836346219 0.822496832489134 0.19640848 0.40179953 prediction 0.644993664978268 Functional Gain - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525582 chr1:248525583 nonsynonymous SNV 0.451 4 22 hPsi_associated_SNPs_29305 0 0 0 0 0 unknown 0.438435875788353 0.440211829865955 0 0 hPsi_site_23029 iPseU_CNN:0;iRNA_PseU:0 23030 chr15 45007842 45007842 1 + G A HNSC 45007841 + 45007821 45007861 41 TTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAA TTCACCCCCACTGAAAAAGATAAGTATGCCTGCCGTGTGAA < 41bp 0.570888492631515 0.893382738595193 0.20932734 0.28193182 prediction 0.644988491927357 Functional Gain - B2M ENSG00000166710 CDS Human protein_coding chr15:45007841 chr15:45007842 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29306 0 0 1 0 2 Ribosome 0.438716041016033 0.438715693447739 0 0 hPsi_site_23030 iPseU_CNN:0;iRNA_PseU:0 23031 chr5 34845632 34845632 1 + G A UCEC 34845631 + 34845611 34845651 41 CCAGCTCACCAGCAAACAGATGAGTTGTATCCCACTGGTGG CCAGCTCACCAGCAAACAGATAAGTTGTATCCCACTGGTGG < 41bp 0.431727158726985 0.822492598446778 0.48032922 0.84235215 prediction 0.644985196893555 Functional Gain - TTC23L ENSG00000205838 CDS Human protein_coding chr5:34845631 chr5:34845632 nonsynonymous SNV 0.012 0 22 hPsi_associated_SNPs_29307 0 0 0 0 1 chromatin 0.438718593016545 0.438718612894445 0.6847043 0 hPsi_site_23031 iPseU_CNN:0.6847043;iRNA_PseU:0 23032 chr16 5046404 5046404 1 + G A UCEC 5046403 + 5046383 5046423 41 CCTGGGCCACCTCACGCCCATGCAGGAGAGCTGCCTGATCC CCTGGGCCACCTCACGCCCATACAGGAGAGCTGCCTGATCC < 41bp 0.395168309772125 0.82249028572164 0.34761518 0.5351994 prediction 0.64498057144328 Functional Gain - SEC14L5 ENSG00000103184 CDS Human protein_coding chr16:5046403 chr16:5046404 nonsynonymous SNV 0.979 0 22 hPsi_associated_SNPs_29308 0 0 0 0 2 exosome 0.438715134802972 0.438712498049731 0.0703988 0 hPsi_site_23032 iPseU_CNN:0.0703988;iRNA_PseU:0 23033 chr1 27094325 27094325 1 + G T LGG 27094324 + 27094304 27094344 41 CAATGAGAAGATCACCAAGTTGTATGAGCTGGGTGGTGAGC CAATGAGAAGATCACCAAGTTTTATGAGCTGGGTGGTGAGC < 41bp 0.505566902908492 0.82805069195587 0.30651492 0.5968704 prediction 0.644967578094755 Functional Gain - ARID1A ENSG00000117713 CDS Human protein_coding chr1:27094324 chr1:27094325 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29309 0 0 1 0 1 Nucleus 0.43872573983778 0.438618244145926 0.1937408 0 hPsi_site_23033 iPseU_CNN:0.1937408;iRNA_PseU:0 23034 chr8 110100335 110100335 1 + C A STAD 110100334 + 110100314 110100354 41 TTACCTAATGGACTTTGGTGTCTTTTATGTTGTGCCAATGA TTACCTAATGGACTTTGGTGTATTTTATGTTGTGCCAATGA < 41bp 0.535837340842927 0.858317113549989 0.255679 0.47342217 prediction 0.644959545414124 Functional Gain - TRHR ENSG00000174417 CDS Human protein_coding chr8:110100334 chr8:110100335 synonymous SNV . 0 22 hPsi_associated_SNPs_29310 0 0 0 0 0 exosome 0.43871438616744 0.438438174712116 0 0 hPsi_site_23034 iPseU_CNN:0;iRNA_PseU:0 23035 chrX 73740856 73740856 1 + C A LUAD 73740855 + 73740835 73740875 41 AGCCCTCGCGATGGGTATGATCTTCTTCTGTTCTCCCATTG AGCCCTCGCGATGGGTATGATATTCTTCTGTTCTCCCATTG < 41bp 0.546065181141379 0.868542080438649 0.6328124 0.71728206 prediction 0.64495379859454 Functional Gain - SLC16A2 ENSG00000147100 CDS Human protein_coding chrX:73740855 chrX:73740856 synonymous SNV . 0 22 hPsi_associated_SNPs_29311 0 0 0 0 1 Ribosome 0.438707538367202 0.438941438094594 0.16893932 0 hPsi_site_23035 iPseU_CNN:0.16893932;iRNA_PseU:0 23036 chrX 100515554 100515554 1 + G A STAD 100515553 + 100515533 100515573 41 ATCATGGAGAAACTCCGTCATGCCTTCCCCAGTGTGCGAAG ATCATGGAGAAACTCCGTCATACCTTCCCCAGTGTGCGAAG < 41bp 0.417893196432035 0.822475613009613 0.2672724 0.44975263 prediction 0.644951226019226 Functional Gain - DRP2 ENSG00000102385 CDS Human protein_coding chrX:100515553 chrX:100515554 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29312 0 0 0 0 1 nucleoplasm 0.434771795664753 0.438769853931198 0 0 hPsi_site_23036 iPseU_CNN:0;iRNA_PseU:0 23037 chr3 178951951 178951951 1 + C A UCEC 178951950 + 178951930 178951970 41 CAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTG CAATCTCTTCATAAATCTTTTATCAATGATGCTTGGCTCTG < 41bp 0.523173712313024 0.845646531176158 0.22021258 0.3109461 prediction 0.644945637726268 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178951950 chr3:178951951 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29313 0 0 1 0 1 Ribosome 0.438650378709593 0.438698812627499 0 0 hPsi_site_23037 iPseU_CNN:0;iRNA_PseU:0 23038 chr3 126915977 126915977 1 + C A UCEC 126915976 + 126915956 126915996 41 CCACTCTGGGCGGGGCCACCTCCAGCCACTGTCCCCAGGTG CCACTCTGGGCGGGGCCACCTACAGCCACTGTCCCCAGGTG < 41bp 0.484401536725431 0.82246991283783 0.28544754 0.35848844 prediction 0.64493982567566 Functional Gain - C3orf56 ENSG00000214324 CDS Human lincRNA chr3:126915976 chr3:126915977 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_29314 0 0 0 0 0 unknown 0.438718568247634 0.438464479670402 0 0 hPsi_site_23038 iPseU_CNN:0;iRNA_PseU:0 23039 chr20 33764071 33764071 1 + G A BLCA 33764070 + 33764050 33764090 41 TGTGAATGGGAGCTCCTTTGTGAGTTTCCGGCCGGAGAGAG TGTGAATGGGAGCTCCTTTGTAAGTTTCCGGCCGGAGAGAG < 41bp 0.397371768364652 0.822469221073872 0.26558697 0.5441095 prediction 0.644938442147743 Functional Gain - PROCR ENSG00000101000 CDS Human protein_coding chr20:33764070 chr20:33764071 synonymous SNV . 0 22 hPsi_associated_SNPs_29315 0 0 1 0 0 Endoplasmic reticulum 0.438719412683043 0.438718591210289 0.088219 0 hPsi_site_23039 iPseU_CNN:0.088219;iRNA_PseU:0 23040 chr20 44639620 44639620 1 + C A UCEC 44639619 + 44639599 44639639 41 CTCCTGGCACACGCCTTTCCTCCTGGCCCCGGCATTCAGGG CTCCTGGCACACGCCTTTCCTACTGGCCCCGGCATTCAGGG < 41bp 0.450707752187037 0.822465978558005 0.21436942 0.4352769 prediction 0.644931957116011 Functional Gain - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44639619 chr20:44639620 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_29316 0 0 0 0 2 Endoplasmic reticulum 0.438717536312233 0.438718653438552 0 0 hPsi_site_23040 iPseU_CNN:0;iRNA_PseU:0 23041 chr1 210415401 210415401 1 + G A SKCM 210415400 + 210415380 210415420 41 GATGGCCAGATACCTGCCAATGAAATCTTTGTCACTAATGT GATGGCCAGATACCTGCCAATAAAATCTTTGTCACTAATGT < 41bp 0.421265861913837 0.82246596977392 0.16497967 0.20691672 prediction 0.64493193954784 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415400 chr1:210415401 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_29317 0 0 1 0 0 exosome 0.438713760090182 0.438705178688375 0 0 hPsi_site_23041 iPseU_CNN:0;iRNA_PseU:0 23042 chr8 58192971 58192971 1 + G A rs73609764 58192970 + 58192950 58192990 41 CGAGAGGTTGGAGACGTCCTTGTCCGAGAAGTTGGAGGGTC CGAGAGGTTGGAGACGTCCTTATCCGAGAAGTTGGAGGGTC < 41bp 0.459847993263882 0.822464761488292 0.28957427 0.3716861 prediction 0.644929522976583 Functional Gain - LINC00588 ENSG00000215117 ncRNA_exonic Human lincRNA chr8:58192970 chr8:58192971 . . 0 22 hPsi_associated_SNPs_29318 0 0 0 0 0 unknown 0.438716949528686 0.438714729491654 0 0 hPsi_site_23042 iPseU_CNN:0;iRNA_PseU:0 23043 chr6 10709643 10709643 1 + G A LUAD 10709642 + 10709622 10709662 41 GAGGAAAATGGTAGAAATGTTGGAAAAGAAGAGGAAAAAGA GAGGAAAATGGTAGAAATGTTAGAAAAGAAGAGGAAAAAGA < 41bp 0.445836506950225 0.822456427694368 0.26768863 0.30540892 prediction 0.644912855388736 Functional Gain - PAK1IP1 ENSG00000111845 CDS Human protein_coding chr6:10709642 chr6:10709643 synonymous SNV . 0 22 hPsi_associated_SNPs_29319 0 0 1 0 0 Ribosome 0.43871747967638 0.43871982327867 0 0 hPsi_site_23043 iPseU_CNN:0;iRNA_PseU:0 23044 chrX 13607720 13607720 1 + C A LUSC 13607719 + 13607699 13607739 41 ATCGGCACGTCAGCCTGGGGTCTGTCACTATGGAACTAAAC ATCGGCACGTCAGCCTGGGGTATGTCACTATGGAACTAAAC < 41bp 0.553812161317509 0.876266464480793 0.20239097 0.22875226 prediction 0.644908606326569 Functional Gain - EGFL6 ENSG00000198759 CDS Human protein_coding chrX:13607719 chrX:13607720 synonymous SNV . 0 22 hPsi_associated_SNPs_29320 0 0 0 0 3 exosome 0.438728899683693 0.438719164745901 0 0 hPsi_site_23044 iPseU_CNN:0;iRNA_PseU:0 23045 chr11 55321929 55321929 1 + C A UCEC 55321928 + 55321908 55321948 41 GATCCCTGTTGGAGCTTTCATCTTTTCCTTGGGAAACATGC GATCCCTGTTGGAGCTTTCATATTTTCCTTGGGAAACATGC < 41bp 0.508647716035638 0.831100136779792 0.40227225 0.47498053 prediction 0.644904841488307 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55321928 chr11:55321929 synonymous SNV . 0 22 hPsi_associated_SNPs_29321 0 0 0 0 0 unknown 0.438718592996551 0.438718559516285 0 0 hPsi_site_23045 iPseU_CNN:0;iRNA_PseU:0 23046 chr16 69458700 69458700 1 + G A CESC 69458699 + 69458679 69458719 41 GGTGGCAAAGCGCAACTCCTTGAAGGAACTGTGGCTTGTGA GGTGGCAAAGCGCAACTCCTTAAAGGAACTGTGGCTTGTGA < 41bp 0.563328398313473 0.885778497893818 0.4555227 0.8144301 prediction 0.64490019916069 Functional Gain - CYB5B ENSG00000103018 CDS Human protein_coding chr16:69458699 chr16:69458700 synonymous SNV . 0 22 hPsi_associated_SNPs_29322 0 0 1 0 1 Ribosome 0.438695448294348 0.438718732757608 0.6288602 0 hPsi_site_23046 iPseU_CNN:0.6288602;iRNA_PseU:0 23047 chr11 124481488 124481488 1 + C A UCEC 124481487 + 124481467 124481507 41 CACAGCTGCAGAGTACATGCTCTCAGATGCCCTGCTGCCTG CACAGCTGCAGAGTACATGCTATCAGATGCCCTGCTGCCTG < 41bp 0.537991753604866 0.860439995201927 0.25468773 0.41701603 prediction 0.644896483194122 Functional Gain - PANX3 ENSG00000154143 CDS Human protein_coding chr11:124481487 chr11:124481488 synonymous SNV . 0 22 hPsi_associated_SNPs_29323 0 0 0 0 0 unknown 0.438703953982416 0.438812880445836 0 0 hPsi_site_23047 iPseU_CNN:0;iRNA_PseU:0 23048 chr9 4841274 4841274 1 + G T BRCA 4841273 + 4841253 4841293 41 TCAGATGGCGAACCGGATTGTGGATTCTGCAAGGAGCATCC TCAGATGGCGAACCGGATTGTTGATTCTGCAAGGAGCATCC < 41bp 0.484712082339562 0.822442054351053 0.31392592 0.40498924 prediction 0.644884108702106 Functional Gain - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4841273 chr9:4841274 synonymous SNV . 0 22 hPsi_associated_SNPs_29324 0 0 1 0 3 Cytosol 0.438718531811789 0.438721381275082 0 0 hPsi_site_23048 iPseU_CNN:0;iRNA_PseU:0 23049 chr17 7357774 7357774 1 + G A UCEC 7357773 + 7357753 7357793 41 ACCTTCTCAGTCATCCTTAGTGTCGTGGTTCTCAACCTGCA ACCTTCTCAGTCATCCTTAGTATCGTGGTTCTCAACCTGCA < 41bp 0.587681116110222 0.910122540581921 0.32635593 0.689041 prediction 0.644882848943398 Functional Gain - CHRNB1 ENSG00000170175 CDS Human protein_coding chr17:7357773 chr17:7357774 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_29325 0 0 0 0 1 chromatin 0.43871937225109 0.438718842905759 0.378082 0 hPsi_site_23049 iPseU_CNN:0.378082;iRNA_PseU:0 23050 chr1 89294214 89294214 1 + C A STAD 89294213 + 89294193 89294233 41 TTTTGTGGCACTCCTGAATTTCTTGCCCCAGAAGTATTAAC TTTTGTGGCACTCCTGAATTTATTGCCCCAGAAGTATTAAC < 41bp 0.462391591865824 0.822439757205013 0.40469658 0.6302576 prediction 0.644879514410026 Functional Gain - PKN2 ENSG00000065243 CDS Human protein_coding chr1:89294213 chr1:89294214 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29326 0 0 1 0 2 Nucleus 0.438718592995102 0.438718592995102 0.2605152 0 hPsi_site_23050 iPseU_CNN:0.2605152;iRNA_PseU:0 23051 chr21 31802915 31802915 1 + G A LUSC 31802914 + 31802894 31802934 41 TGCTGCTACTCGCTGGGAAATGGATCCAGTGGCTTCAGATT TGCTGCTACTCGCTGGGAAATAGATCCAGTGGCTTCAGATT < 41bp 0.558461103027999 0.880899876909153 0.28275135 0.32700425 prediction 0.644877547762308 Functional Gain - KRTAP13-4 ENSG00000186971 CDS Human protein_coding chr21:31802914 chr21:31802915 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29327 0 0 0 0 0 unknown 0.438718534142125 0.439386834139409 0 0 hPsi_site_23051 iPseU_CNN:0;iRNA_PseU:0 23052 chr5 161580347 161580347 1 + C A STAD 161580346 + 161580326 161580366 41 CTTCTGCCTGTTTAATCTGGTCTATTGGGTCTCCTACCTCT CTTCTGCCTGTTTAATCTGGTATATTGGGTCTCCTACCTCT < 41bp 0.533768175674445 0.856201876827166 0.37763563 0.7445018 prediction 0.644867402305443 Functional Gain - GABRG2 ENSG00000113327 CDS Human protein_coding chr5:161580346 chr5:161580347 synonymous SNV . 0 22 hPsi_associated_SNPs_29328 0 0 1 0 0 exosome 0.438718592894373 0.438718592995046 0.4890036 0 hPsi_site_23052 iPseU_CNN:0.4890036;iRNA_PseU:0 23053 chr1 161133352 161133352 1 + G A CESC 161133351 + 161133331 161133371 41 TTGATCTGTGGTAGTGATGATGACCGAGCCAACCTAATGTG TTGATCTGTGGTAGTGATGATAACCGAGCCAACCTAATGTG < 41bp 0.400138556963788 0.822426437732613 0.30933645 0.7611635 prediction 0.644852875465227 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161133351 chr1:161133352 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29329 0 0 1 0 2 Cytosol 0.439823476999192 0.438717715073491 0.522327 0 hPsi_site_23053 iPseU_CNN:0.522327;iRNA_PseU:0 23054 chr8 22974487 22974487 1 + C A UCEC 22974486 + 22974466 22974506 41 TCCTGCCTCTTCTCATTACCTCTCATGCACCATCGTAGGGA TCCTGCCTCTTCTCATTACCTATCATGCACCATCGTAGGGA < 41bp 0.532932523516587 0.855357322811058 0.20628971 0.25378466 prediction 0.644849598588941 Functional Gain - TNFRSF10C ENSG00000173535 CDS Human protein_coding chr8:22974486 chr8:22974487 synonymous SNV . 0 22 hPsi_associated_SNPs_29330 0 0 0 0 0 exosome 0.438718592929828 0.438718551386492 0 0 hPsi_site_23054 iPseU_CNN:0;iRNA_PseU:0 23055 chr16 66431938 66431938 1 + G A BLCA 66431937 + 66431917 66431957 41 GTCCACATTGAAGTTTTGGATGAGAATGACAATGCCCCGGA GTCCACATTGAAGTTTTGGATAAGAATGACAATGCCCCGGA < 41bp 0.396337214939859 0.822419242358526 0.31124035 0.53956985 prediction 0.644838484717052 Functional Gain - CDH5 ENSG00000179776 CDS Human protein_coding chr16:66431937 chr16:66431938 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_29331 0 0 0 0 2 Cytosol 0.438867811150557 0.438560832808082 0.0791397 0 hPsi_site_23055 iPseU_CNN:0.0791397;iRNA_PseU:0 23056 chr20 31830330 31830330 1 + C A GBM 31830329 + 31830309 31830349 41 ACTACAGTTTGTCATCAAGGTCTAAGCCTTCCAGGAAGGGG ACTACAGTTTGTCATCAAGGTATAAGCCTTCCAGGAAGGGG < 41bp 0.533714238867797 0.856133214418539 0.37829542 0.77043504 prediction 0.644837951101484 Functional Gain - BPIFA1 ENSG00000198183 CDS Human protein_coding chr20:31830329 chr20:31830330 synonymous SNV . 0 22 hPsi_associated_SNPs_29332 0 0 0 0 2 unknown 0.438718592995089 0.438718592992406 0.54087008 0 hPsi_site_23056 iPseU_CNN:0.54087008;iRNA_PseU:0 23057 chr7 143003618 143003618 1 + G A rs181124609 143003617 + 143003597 143003637 41 ACCTCAGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCA ACCTCAGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCA < 41bp 0.445432312721993 0.822418418914221 0.24457109 0.3387338 prediction 0.644836837828443 Functional Gain - CASP2 ENSG00000106144 UTR3 Human protein_coding chr7:143003617 chr7:143003618 . . 0 22 hPsi_associated_SNPs_29333 0 0 1 0 0 Nucleus 0.439261982000689 0.438724275293486 0 0 hPsi_site_23057 iPseU_CNN:0;iRNA_PseU:0 23058 chr16 30976009 30976009 1 + G T SKCM 30976008 + 30975988 30976028 41 TTTTCCCGCCGCCACTTCTCTGCATCTTCAGCCTCCACAAC TTTTCCCGCCGCCACTTCTCTTCATCTTCAGCCTCCACAAC < 41bp 0.510592431172995 0.833003690062078 0.53183466 0.6980748 prediction 0.644822517778164 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976008 chr16:30976009 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_29334 0 0 1 0 1 Cytosol 0.438715667251162 0.438718608997264 0.33248028 0 hPsi_site_23058 iPseU_CNN:0.33248028;iRNA_PseU:0 23059 chr8 146032685 146032685 1 + G A rs113318407 146032684 + 146032664 146032704 41 CCTCCCCTGGGGGCACCCTGTGGGGGGGCACCCTGCACCAC CCTCCCCTGGGGGCACCCTGTAGGGGGGCACCCTGCACCAC < 41bp 0.429943794500065 0.822405772661222 0.53877383 0.93737155 prediction 0.644811545322443 Functional Gain - ZNF517 ENSG00000197363 CDS Human protein_coding chr8:146032684 chr8:146032685 synonymous SNV . 0 22 hPsi_associated_SNPs_29335 0 0 0 0 0 chromatin 0.438718592994594 0.438718779731664 0.79719544 0 hPsi_site_23059 iPseU_CNN:0.79719544;iRNA_PseU:0 23060 chr3 170108106 170108106 1 + G A rs555227200 170108105 + 170108085 170108125 41 AACAAAGTGGGAATTGGCCTTGTTGCTGCCGCTTCATCTCC AACAAAGTGGGAATTGGCCTTATTGCTGCCGCTTCATCTCC < 41bp 0.412684178529296 0.822404187190577 0.26910597 0.4309764 prediction 0.644808374381153 Functional Gain - SKIL ENSG00000136603 CDS Human protein_coding chr3:170108105 chr3:170108106 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_29336 0 0 1 0 1 Nucleus 0.43901117849321 0.438719537811137 0 0 hPsi_site_23060 iPseU_CNN:0;iRNA_PseU:0 23061 chr6 71269595 71269595 1 + C A UCEC 71269594 + 71269574 71269614 41 ATATTTTTAGAGAAATTCTTTCTGGTTGCTGCCCTCAAATA ATATTTTTAGAGAAATTCTTTATGGTTGCTGCCCTCAAATA < 41bp 0.507592978457354 0.829995408036438 0.2552395 0.48921433 prediction 0.644804859158168 Functional Gain - FAM135A ENSG00000082269 CDS Human protein_coding chr6:71269594 chr6:71269595 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29337 0 0 1 0 0 Cytosol 0.438718562247658 0.438724331450821 0 0 hPsi_site_23061 iPseU_CNN:0;iRNA_PseU:0 23062 chr6 106553418 106553418 1 + C A BLCA 106553417 + 106553397 106553437 41 CAGCCTGCCCCACCCCATGCTCAACCCCACTTCTCTCCCGA CAGCCTGCCCCACCCCATGCTAAACCCCACTTCTCTCCCGA < 41bp 0.456621714464257 0.822401293452444 0.76625574 0.8060696 prediction 0.644802586904888 Functional Gain - PRDM1 ENSG00000057657 CDS Human protein_coding chr6:106553417 chr6:106553418 synonymous SNV 0.633 0 22 hPsi_associated_SNPs_29338 0 0 0 0 0 cytosol 0.441526494275457 0.439051455363751 0.0796277200000002 0 hPsi_site_23062 iPseU_CNN:0.0796277200000002;iRNA_PseU:0 23063 chr9 38397371 38397371 1 + G A rs188012654 38397370 + 38397350 38397390 41 TTGACGAATGCTTGCCAAGCTGTTTTAAAGCCAAGAACACC TTGACGAATGCTTGCCAAGCTATTTTAAAGCCAAGAACACC < 41bp 0.439885535604388 0.822397644145836 0.21522352 0.35069335 prediction 0.644795288291671 Functional Gain - ALDH1B1 ENSG00000137124 UTR3 Human protein_coding chr9:38397370 chr9:38397371 . . 0 22 hPsi_associated_SNPs_29339 0 0 1 0 0 Cytosol 0.438711726234447 0.438710645588188 0 0 hPsi_site_23063 iPseU_CNN:0;iRNA_PseU:0 Dental caries 23064 chr20 33759987 33759987 1 + G A LIHC 33759986 + 33759966 33760006 41 AACATTGCTGCCGATACTGCTGCTGTCTGGCTGGGCCTTTT AACATTGCTGCCGATACTGCTACTGTCTGGCTGGGCCTTTT < 41bp 0.409420174615646 0.822397505035125 0.29446238 0.42183965 prediction 0.64479501007025 Functional Gain - PROCR ENSG00000101000 CDS Human protein_coding chr20:33759986 chr20:33759987 synonymous SNV . 0 22 hPsi_associated_SNPs_29340 0 0 1 0 1 Endoplasmic reticulum 0.438722922846012 0.438718784176231 0 0 hPsi_site_23064 iPseU_CNN:0;iRNA_PseU:0 23065 chr14 52735021 52735021 1 + C A UCEC 52735020 + 52735000 52735040 41 GAGCGCCTTCTCCCTGGCTTTCTGCGCGCTACCTTTCATGG GAGCGCCTTCTCCCTGGCTTTATGCGCGCTACCTTTCATGG < 41bp 0.535197191679129 0.85759335281907 0.6944048 0.9693264 prediction 0.644792322279881 Functional Gain - PTGDR ENSG00000168229 CDS Human protein_coding chr14:52735020 chr14:52735021 nonsynonymous SNV 0.717 3 22 hPsi_associated_SNPs_29341 0 0 0 0 0 exosome 0.438718416145896 0.43861670469998 0.5498432 0 hPsi_site_23065 iPseU_CNN:0.5498432;iRNA_PseU:0 23066 chr1 159799710 159799710 1 + C A LUAD 159799709 + 159799689 159799729 41 TGCTGAGCAAAGTCGGGGGCTCGGTGCTGCTGGTGGCAGCG TGCTGAGCAAAGTCGGGGGCTAGGTGCTGCTGGTGGCAGCG < 41bp 0.458858155612411 0.822395413041377 0.23057029 0.32879043 prediction 0.644790826082754 Functional Gain - SLAMF8 ENSG00000158714 CDS Human protein_coding chr1:159799709 chr1:159799710 stopgain 0.017 0 22 hPsi_associated_SNPs_29342 0 0 0 0 1 exosome 0.438717767294816 0.438730497773701 0 0 hPsi_site_23066 iPseU_CNN:0;iRNA_PseU:0 23067 chr2 96992374 96992374 1 + C A UCEC 96992373 + 96992353 96992393 41 CTGACTCCTACTCTCCTACTTCTCCAGATGCAGAGGCCTCC CTGACTCCTACTCTCCTACTTATCCAGATGCAGAGGCCTCC < 41bp 0.468577308574537 0.822393065275514 0.26319647 0.3815255 prediction 0.644786130551029 Functional Gain - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96992373 chr2:96992374 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_29343 0 0 1 0 0 Endoplasmic reticulum 0.438718592995079 0.438718592995102 0 0 hPsi_site_23067 iPseU_CNN:0;iRNA_PseU:0 23068 chr19 52887390 52887390 1 + G A rs114874361 52887389 + 52887369 52887409 41 TAAGGGAAAAACCGTGTGAATGTAATGAGCATGGCAAAGCC TAAGGGAAAAACCGTGTGAATATAATGAGCATGGCAAAGCC < 41bp 0.433072327149332 0.822390242644601 0.24723378 0.31989944 prediction 0.644780485289202 Functional Gain - ZNF880 ENSG00000221923 CDS Human protein_coding chr19:52887389 chr19:52887390 nonsynonymous SNV 0.000 3 22 hPsi_associated_SNPs_29344 0 0 0 0 0 Exosome 0.438738280162605 0.438730836007765 0 0 hPsi_site_23068 iPseU_CNN:0;iRNA_PseU:0 23069 chr16 4432507 4432507 1 + G A rs368783578 4432506 + 4432486 4432526 41 GCCTTTGGGGCCCGGGCGGGTGCCGGAGGGCGAGGAGGCCT GCCTTTGGGGCCCGGGCGGGTACCGGAGGGCGAGGAGGCCT < 41bp 0.568111806413866 0.890493938038746 0.21471792 0.7616297 prediction 0.64476426324976 Functional Gain - VASN ENSG00000168140 CDS Human protein_coding chr16:4432506 chr16:4432507 synonymous SNV . 0 22 hPsi_associated_SNPs_29345 0 0 1 0 0 nucleus 0.438854819105891 0.438722028608033 0.5232594 0 hPsi_site_23069 iPseU_CNN:0.5232594;iRNA_PseU:0 23070 chr10 101591376 101591376 1 + C A UCEC 101591375 + 101591355 101591395 41 GGGGACTTTGCAGGTGAAGTTCTCCATCTACCTGGAGTACC GGGGACTTTGCAGGTGAAGTTATCCATCTACCTGGAGTACC < 41bp 0.470186788643977 0.822381301200889 0.35387117 0.60432994 prediction 0.644762602401779 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101591375 chr10:101591376 nonsynonymous SNV 0.820 1 22 hPsi_associated_SNPs_29346 0 0 1 0 1 Endoplasmic reticulum 0.43871859401726 0.438718592995102 0.20865988 0 hPsi_site_23070 iPseU_CNN:0.20865988;iRNA_PseU:0 23071 chr2 96078258 96078258 1 + C A UCEC 96078257 + 96078237 96078277 41 CAACACCAACCAGATGGTATTCAAGACAGAGGACCTGATAG CAACACCAACCAGATGGTATTAAAGACAGAGGACCTGATAG < 41bp 0.542728122542554 0.865099222954138 0.7095722 0.7572411 prediction 0.644742200823168 Functional Gain - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96078257 chr2:96078258 nonsynonymous SNV 0.981 5 22 hPsi_associated_SNPs_29347 0 0 1 0 2 Ribosome 0.431764086427492 0.457532990809471 0.0953378 0 hPsi_site_23071 iPseU_CNN:0.0953378;iRNA_PseU:0 23072 chr19 45573810 45573810 1 + C A GBM 45573809 + 45573789 45573829 41 TTCCAGGTCGAGAATACAGCTCTTCTCGAAGGTAAGGAAGC TTCCAGGTCGAGAATACAGCTATTCTCGAAGGTAAGGAAGC < 41bp 0.4711035989607 0.822366795613248 0.29580653 0.32675034 prediction 0.644733591226497 Functional Gain - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45573809 chr19:45573810 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29348 0 0 1 0 2 chromatin 0.438732074716444 0.438717208134103 0 0 hPsi_site_23072 iPseU_CNN:0;iRNA_PseU:0 23073 chrX 70517767 70517767 1 + C A UCEC 70517766 + 70517746 70517786 41 GCGGCGACAGCAGGAAGGATTCAAGGGAACCTTCCCTGATG GCGGCGACAGCAGGAAGGATTAAAGGGAACCTTCCCTGATG < 41bp 0.553238550174755 0.875604477288515 0.34904245 0.5895978 prediction 0.644731854227519 Functional Gain - NONO ENSG00000147140 CDS Human protein_coding chrX:70517766 chrX:70517767 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29349 0 0 1 0 2 Nucleus 0.438718592962067 0.43871859068588 0.1791956 0 hPsi_site_23073 iPseU_CNN:0.1791956;iRNA_PseU:0 23074 chr6 46644140 46644140 1 + C A UCEC 46644139 + 46644119 46644159 41 GACCCCTTGGTCAATGGTGTTCTGGCTTACTTATGAAAAAA GACCCCTTGGTCAATGGTGTTATGGCTTACTTATGAAAAAA < 41bp 0.481158496647066 0.822365135429619 0.43905225 0.32689786 prediction 0.644730270859237 Functional Gain - SLC25A27 ENSG00000153291 CDS Human protein_coding chr6:46644139 chr6:46644140 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29350 0 0 1 0 1 exosome 0.438718592995069 0.438718592995119 0 0 hPsi_site_23074 iPseU_CNN:0;iRNA_PseU:0 23075 chr17 51902297 51902297 1 + G A SKCM 51902296 + 51902276 51902316 41 GGTGGAGTACACCATGATATTGATTTTTGCATTGCCCGGTC GGTGGAGTACACCATGATATTAATTTTTGCATTGCCCGGTC < 41bp 0.426850542249875 0.822345293496027 0.26476324 0.31819156 prediction 0.644690586992053 Functional Gain - KIF2B ENSG00000141200 CDS Human protein_coding chr17:51902296 chr17:51902297 nonsynonymous SNV 0.679 2 22 hPsi_associated_SNPs_29351 0 0 0 0 0 exosome 0.438715215735478 0.438718592818676 0 0 hPsi_site_23075 iPseU_CNN:0;iRNA_PseU:0 23076 chr7 149577039 149577039 1 + G A rs77182814 149577038 + 149577018 149577058 41 TAGATGTTGGCACCCTTTGCTGTGTCTCCTCAGAGTATCCT TAGATGTTGGCACCCTTTGCTATGTCTCCTCAGAGTATCCT < 41bp 0.567948414812114 0.890293331750973 0.35037345 0.49200174 prediction 0.644689833877718 Functional Gain - ATP6V0E2 ENSG00000204934 ncRNA_intronic Human antisense chr7:149577038 chr7:149577039 . . 0 22 hPsi_associated_SNPs_29352 0 0 1 0 0 Ribosome 0.438718592960257 0.43871893649487 0 0 hPsi_site_23076 iPseU_CNN:0;iRNA_PseU:0 23077 chr11 57427470 57427470 1 + C A SKCM 57427469 + 57427449 57427489 41 CATCGAGCGGCCTGCAGATGTCGAAGAGGGTTTCTCTATCC CATCGAGCGGCCTGCAGATGTAGAAGAGGGTTTCTCTATCC < 41bp 0.548730303729967 0.871072644943241 0.37634665 0.59148324 prediction 0.644684682426548 Functional Gain - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427469 chr11:57427470 synonymous SNV . 0 22 hPsi_associated_SNPs_29353 0 0 0 0 1 Cytosol 0.438718818122812 0.438601076683894 0.18296648 0 hPsi_site_23077 iPseU_CNN:0.18296648;iRNA_PseU:0 23078 chr17 61684783 61684783 1 + G A UCEC 61684782 + 61684762 61684802 41 ATCGAAGCAGGAGCTGAGGATGTCAAGGAAACTGAAGATGA ATCGAAGCAGGAGCTGAGGATATCAAGGAAACTGAAGATGA < 41bp 0.416245834239723 0.822340935279727 0.27544695 0.47942644 prediction 0.644681870559454 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61684782 chr17:61684783 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29354 0 0 1 0 1 Ribosome 0.439070396827354 0.438614224641606 0 0 hPsi_site_23078 iPseU_CNN:0;iRNA_PseU:0 23079 chr1 20517489 20517489 1 + C A GBM 20517488 + 20517468 20517508 41 CTCACTGCAACTGAGCAGTATCCGGGCTCTTTACCAAGACG CTCACTGCAACTGAGCAGTATACGGGCTCTTTACCAAGACG < 41bp 0.460970535250292 0.822337359653906 0.35760105 0.7596501 prediction 0.644674719307812 Functional Gain - UBXN10 ENSG00000162543 CDS Human protein_coding chr1:20517488 chr1:20517489 synonymous SNV . 0 22 hPsi_associated_SNPs_29355 0 0 0 0 0 Cytosol 0.43871873883099 0.438718593563989 0.5193002 0 hPsi_site_23079 iPseU_CNN:0.5193002;iRNA_PseU:0 23080 chr14 93263822 93263822 1 + C A UCEC 93263821 + 93263801 93263841 41 CTTGCTGGAAAGGCAGAAGATCTTTTAAACCGAGTTGATCA CTTGCTGGAAAGGCAGAAGATATTTTAAACCGAGTTGATCA < 41bp 0.465899099558744 0.822334276191165 0.2918619 0.53441596 prediction 0.644668552382331 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93263821 chr14:93263822 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29356 0 0 1 0 1 chromatin 0.439004548315982 0.438718593392143 0.06883192 0 hPsi_site_23080 iPseU_CNN:0.06883192;iRNA_PseU:0 23081 chr5 167812356 167812356 1 + G T COAD 167812355 + 167812335 167812375 41 AAGCAGCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAGCA AAGCAGCAGCGCCTGGAGCTTTCACAGCAGGAGTACCAGCA < 41bp 0.48821058077027 0.822325294065383 0.23032048 0.3633179 prediction 0.644650588130767 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167812355 chr5:167812356 nonsynonymous SNV 0.987 4 22 hPsi_associated_SNPs_29357 0 0 1 0 1 Ribosome 0.438718586644064 0.438718552168069 0 0 hPsi_site_23081 iPseU_CNN:0;iRNA_PseU:0 23082 chr12 537966 537966 1 + C A UCEC 537965 + 537945 537985 41 GACAAGAAAAAGATTCAGAATCTCTTGGCTCTTGTGGGAAC GACAAGAAAAAGATTCAGAATATCTTGGCTCTTGTGGGAAC < 41bp 0.456635443695203 0.822324182302239 0.51882446 0.5061133 prediction 0.644648364604479 Functional Gain - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:537965 chr12:537966 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_29358 0 0 0 0 2 cytosol 0.438715323630922 0.438718320077424 0 0 hPsi_site_23082 iPseU_CNN:0;iRNA_PseU:0 23083 chr15 31362189 31362189 1 + G A HNSC 31362188 + 31362168 31362208 41 GCTGGGAGACTGGCCGCCAATGAAAGCTGTGATCCTAGTGG GCTGGGAGACTGGCCGCCAATAAAAGCTGTGATCCTAGTGG < 41bp 0.552071950382456 0.874392766793112 0.24773821 0.26597476 prediction 0.644641632821311 Functional Gain - TRPM1 ENSG00000134160 CDS Human protein_coding chr15:31362188 chr15:31362189 synonymous SNV . 0 22 hPsi_associated_SNPs_29359 0 0 0 0 0 Cytosol 0.438718590872272 0.438718617663992 0 0 hPsi_site_23083 iPseU_CNN:0;iRNA_PseU:0 23084 chr4 186253882 186253882 1 + C A UCEC 186253881 + 186253861 186253901 41 ATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAA ATAAAAGGCAAGCTCTAAATTATATTCAAAATGCACCAAAA < 41bp 0.486506348340062 0.822319607234461 0.5133203 0.6257274 prediction 0.644639214468921 Functional Gain - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186253881 chr4:186253882 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29360 0 0 1 0 1 Endoplasmic reticulum 0.438718593033937 0.43872162514278 0.2248142 0 hPsi_site_23084 iPseU_CNN:0.2248142;iRNA_PseU:0 23085 chr7 79828562 79828562 1 + G A BLCA 79828561 + 79828541 79828581 41 GATGATGCACGCCAACTCTTTGTGCTAGCTGGAGCTGCTGA GATGATGCACGCCAACTCTTTATGCTAGCTGGAGCTGCTGA < 41bp 0.403573208501673 0.822314762299274 0.30007043 0.28998703 prediction 0.644629524598548 Functional Gain - GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79828561 chr7:79828562 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29361 0 0 1 0 1 Cytosol 0.438231745454443 0.44071715486529 0 0 hPsi_site_23085 iPseU_CNN:0;iRNA_PseU:0 23086 chr5 118835161 118835161 1 + G T SARC 118835160 + 118835140 118835180 41 AAGTTCTGATTTCTCCTGTTTGCCCACCTTCGGAGTTATCA AAGTTCTGATTTCTCCTGTTTTCCCACCTTCGGAGTTATCA < 41bp 0.485852561012582 0.822313805694018 0.23157471 0.28471836 prediction 0.644627611388036 Functional Gain - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118835160 chr5:118835161 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29362 0 0 1 0 1 Cytosol 0.438718619239961 0.438718547938994 0 0 hPsi_site_23086 iPseU_CNN:0;iRNA_PseU:0 23087 chr14 20443864 20443864 1 + C A GBM 20443863 + 20443843 20443883 41 TCACTACTTTATCTAGCAATTCTGTTGGGCAACTTTCTCAT TCACTACTTTATCTAGCAATTATGTTGGGCAACTTTCTCAT < 41bp 0.483245809012042 0.822310806999538 0.3429559 0.5873462 prediction 0.644621613999076 Functional Gain - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20443863 chr14:20443864 nonsynonymous SNV 0.886 0 22 hPsi_associated_SNPs_29363 0 0 0 0 0 unknown 0.43659211788587 0.438777589379202 0.1746924 0 hPsi_site_23087 iPseU_CNN:0.1746924;iRNA_PseU:0 23088 chr7 128494210 128494210 1 + G A SKCM 128494209 + 128494189 128494229 41 GACCCCTTCCCTGCTGTGTTTGGGGACTTCCTGGGCCGGGA GACCCCTTCCCTGCTGTGTTTAGGGACTTCCTGGGCCGGGA < 41bp 0.412146689770635 0.822307883053827 0.3120488 0.5344267 prediction 0.644615766107655 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128494209 chr7:128494210 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_29364 0 0 1 0 0 chromatin 0.438718592528907 0.438718592995102 0.0688534000000001 0 hPsi_site_23088 iPseU_CNN:0.0688534000000001;iRNA_PseU:0 23089 chr1 200017436 200017436 1 + C A LUSC 200017435 + 200017415 200017455 41 AGAAGCCATGTCTCAGGTGATCCAAGCTATGCCCTCTGACC AGAAGCCATGTCTCAGGTGATACAAGCTATGCCCTCTGACC < 41bp 0.459725370797495 0.822298871546482 0.6320589 0.69916254 prediction 0.644597743092965 Functional Gain - NR5A2 ENSG00000116833 CDS Human protein_coding chr1:200017435 chr1:200017436 synonymous SNV . 0 22 hPsi_associated_SNPs_29365 0 0 0 0 0 cytosol 0.438718593137944 0.438718592999485 0.13420728 0 hPsi_site_23089 iPseU_CNN:0.13420728;iRNA_PseU:0 23090 chr17 46196450 46196450 1 + G A GBM 46196449 + 46196429 46196469 41 GGGCCGAAGTACCATGACTGTGTCTGATGCCATTCTTCGAT GGGCCGAAGTACCATGACTGTATCTGATGCCATTCTTCGAT < 41bp 0.590187703043521 0.912485288620583 0.55758333 0.81341076 prediction 0.644595171154124 Functional Gain - SNX11 ENSG00000002919 CDS Human protein_coding chr17:46196449 chr17:46196450 synonymous SNV . 0 22 hPsi_associated_SNPs_29366 0 0 1 0 1 Cytosol 0.438742323280926 0.438684753480311 0.51165486 0 hPsi_site_23090 iPseU_CNN:0.51165486;iRNA_PseU:0 23091 chr3 53220695 53220695 1 + G A BLCA 53220694 + 53220674 53220714 41 ATCCAGGACAAAGGCCGCTTTGAACTCTACCGTGCCACGTA ATCCAGGACAAAGGCCGCTTTAAACTCTACCGTGCCACGTA < 41bp 0.58997946393763 0.912272831292516 0.39216286 0.6604066 prediction 0.644586734709773 Functional Gain - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53220694 chr3:53220695 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_29367 0 0 1 0 2 Cytosol 0.438718318454589 0.438718487264345 0.3208132 0 hPsi_site_23091 iPseU_CNN:0.3208132;iRNA_PseU:0 23092 chr16 72094402 72094402 1 + G A SKCM 72094401 + 72094381 72094421 41 TTATGCAGAAGTAGGGCGTGTGGGTTATGTTTCTGGCTGGG TTATGCAGAAGTAGGGCGTGTAGGTTATGTTTCTGGCTGGG < 41bp 0.404163591401911 0.822289337658038 0.37658274 0.71958464 prediction 0.644578675316076 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094401 chr16:72094402 synonymous SNV . 0 22 hPsi_associated_SNPs_29368 0 0 1 0 0 cytosol 0.438718596293929 0.438718566858041 0.43916928 0 hPsi_site_23092 iPseU_CNN:0.43916928;iRNA_PseU:0 23093 chr1 203134960 203134960 1 + G A BLCA 203134959 + 203134939 203134979 41 ACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCC ACCTTCCTTAAGATTTGGAATAACCATTTCCGCTGCCAGCC < 41bp 0.41410280807423 0.822288949443338 0.28923154 0.34428507 prediction 0.644577898886675 Functional Gain - ADORA1 ENSG00000163485 CDS Human protein_coding chr1:203134959 chr1:203134960 nonsynonymous SNV 0.973 0 22 hPsi_associated_SNPs_29369 0 0 0 0 0 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_23093 iPseU_CNN:0;iRNA_PseU:0 23094 chr2 158142583 158142583 1 + C A CESC 158142582 + 158142562 158142602 41 CAGTTTCCAAAAGTTCGGATTCTTCGCCTCAAAGAGAGACA CAGTTTCCAAAAGTTCGGATTATTCGCCTCAAAGAGAGACA < 41bp 0.468705820269722 0.822287888562986 0.26988143 0.40315086 prediction 0.644575777125971 Functional Gain - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158142582 chr2:158142583 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29370 0 0 1 0 2 Exosome 0.438373639718976 0.43875618836292 0 0 hPsi_site_23094 iPseU_CNN:0;iRNA_PseU:0 23095 chr5 140474704 140474704 1 + G A OV 140474703 + 140474683 140474723 41 CTGTGTCCTACCTTTCCAGGTGTTACTAGAAAATCCCTTGC CTGTGTCCTACCTTTCCAGGTATTACTAGAAAATCCCTTGC < 41bp 0.413323136906038 0.822284578634352 0.2361862 0.44194072 prediction 0.644569157268704 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140474703 chr5:140474704 synonymous SNV . 0 22 hPsi_associated_SNPs_29371 0 0 0 0 0 exosome 0.438718592994809 0.438718592995103 0 0 hPsi_site_23095 iPseU_CNN:0;iRNA_PseU:0 23096 chr15 67482785 67482785 1 + G A UCEC 67482784 + 67482764 67482804 41 ACCAGTACCCCCTGCTGGATTGAGCTGCACCTGAATGGGCC ACCAGTACCCCCTGCTGGATTAAGCTGCACCTGAATGGGCC < 41bp 0.422634093487968 0.822284296895141 0.25038102 0.49565575 prediction 0.644568593790282 Functional Gain - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67482784 chr15:67482785 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_29372 0 0 1 0 1 Cytosol 0.438718592995089 0.4387185929951 0 0 hPsi_site_23096 iPseU_CNN:0;iRNA_PseU:0 23097 chr1 109814285 109814285 1 + G T rs201708082 109814284 + 109814264 109814304 41 GTCCGGAAAGCACTCAAGCTTGCCTGCAGCCGCAAGCCCAG GTCCGGAAAGCACTCAAGCTTTCCTGCAGCCGCAAGCCCAG < 41bp 0.502126646065014 0.824408953360619 0.27988598 0.63186115 prediction 0.64456461459121 Functional Gain - CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109814284 chr1:109814285 nonsynonymous SNV 0.682 0 22 hPsi_associated_SNPs_29373 0 0 1 0 2 Endoplasmic reticulum 0.438716419983047 0.438717973369773 0.2637223 0 hPsi_site_23097 iPseU_CNN:0.2637223;iRNA_PseU:0 23098 chr3 119338471 119338471 1 + C A rs148024430 119338470 + 119338450 119338490 41 CAAGGAAGTGAAAGTCTACCTCCTGACTACTTCCAGTGCTC CAAGGAAGTGAAAGTCTACCTACTGACTACTTCCAGTGCTC < 41bp 0.450707679184743 0.822279825470577 0.24083078 0.27179825 prediction 0.644559650941155 Functional Gain - PLA1A ENSG00000144837 CDS Human protein_coding chr3:119338470 chr3:119338471 synonymous SNV . 0 22 hPsi_associated_SNPs_29374 0 0 0 7 2 exosome 0.438652249366497 0.438711620866473 0 0 hPsi_site_23098 iPseU_CNN:0;iRNA_PseU:0 23099 chr11 68839439 68839439 1 + G T SARC 68839438 + 68839418 68839458 41 AGGCGGCTGGGAACCCGGGCTGCCTTTGAAGTCCTATCCTC AGGCGGCTGGGAACCCGGGCTTCCTTTGAAGTCCTATCCTC < 41bp 0.481997520686661 0.82227726389879 0.2920654 0.52480686 prediction 0.644554527797581 Functional Gain - TPCN2 ENSG00000162341 CDS Human protein_coding chr11:68839438 chr11:68839439 nonsynonymous SNV 0.517 4 22 hPsi_associated_SNPs_29375 0 0 1 0 2 chromatin 0.438718592025529 0.438718592977015 0.04961372 0 hPsi_site_23099 iPseU_CNN:0.04961372;iRNA_PseU:0 23100 chr5 94027837 94027837 1 + C A ACC 94027836 + 94027816 94027856 41 CTATGGCAACACAGTGTGTGTCCAGGAAATTTTGCAACGTT CTATGGCAACACAGTGTGTGTACAGGAAATTTTGCAACGTT < 41bp 0.457171212181445 0.822275931866702 0.27801633 0.62039685 prediction 0.644551863733404 Functional Gain - SLF1 ENSG00000133302 CDS Human protein_coding chr5:94027836 chr5:94027837 synonymous SNV . 0 22 hPsi_associated_SNPs_29376 0 0 1 0 1 Cytosol 0.438718473050691 0.438139477672558 0.2407937 0 hPsi_site_23100 iPseU_CNN:0.2407937;iRNA_PseU:0 23101 chr12 112130625 112130625 1 + G A GBM 112130624 + 112130604 112130644 41 TCCCACCGATGGACACACCTTGGAGGCAGCACCTACAGAGC TCCCACCGATGGACACACCTTAGAGGCAGCACCTACAGAGC < 41bp 0.389133711342786 0.822273792835193 0.41329306 0.7550318 prediction 0.644547585670385 Functional Gain - ACAD10 ENSG00000111271 CDS Human protein_coding chr12:112130624 chr12:112130625 nonsynonymous SNV 0.737 0 22 hPsi_associated_SNPs_29377 0 0 0 0 1 Endoplasmic reticulum 0.438718937726967 0.438718776874087 0.5100636 0 hPsi_site_23101 iPseU_CNN:0.5100636;iRNA_PseU:0 23102 chr11 66627658 66627658 1 + G A rs79880981 66627657 + 66627637 66627677 41 GCCGAGCGGCTGGAAGAGAGTGTGGTGTGATGGACGGGCAG GCCGAGCGGCTGGAAGAGAGTATGGTGTGATGGACGGGCAG < 41bp 0.559381197848615 0.881643366137482 0.46738598 0.52421546 prediction 0.644524336577735 Functional Gain - LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627657 chr11:66627658 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29378 0 0 1 0 0 Ribosome 0.438742089117468 0.438566500702598 0.0484309199999999 0 hPsi_site_23102 iPseU_CNN:0.0484309199999999;iRNA_PseU:0 23103 chr7 99129306 99129306 1 + C A UCEC 99129305 + 99129285 99129325 41 CGTTCCCACCTGGCTGGACATCTTCGACTCCACTCCCGAGA CGTTCCCACCTGGCTGGACATATTCGACTCCACTCCCGAGA < 41bp 0.449648716541479 0.82225950673098 0.78552973 0.8441891 prediction 0.644519013461959 Functional Gain - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99129305 chr7:99129306 nonsynonymous SNV 0.895 1 22 hPsi_associated_SNPs_29379 0 0 1 0 0 Cytosol 0.438645898712364 0.438897868086094 0.11731874 0 hPsi_site_23103 iPseU_CNN:0.11731874;iRNA_PseU:0 23104 chr3 142402946 142402946 1 + C A UCEC 142402945 + 142402925 142402965 41 AGAAGGAAAACCTCACTTGGTCTTGGGACTTCTCTGGCAGA AGAAGGAAAACCTCACTTGGTATTGGGACTTCTCTGGCAGA < 41bp 0.456578210999876 0.822259031981718 0.33384567 0.6695872 prediction 0.644518063963436 Functional Gain - PLS1 ENSG00000120756 CDS Human protein_coding chr3:142402945 chr3:142402946 synonymous SNV . 0 22 hPsi_associated_SNPs_29380 0 0 1 0 2 Nucleus 0.438718592995103 0.438718592995102 0.3391744 0 hPsi_site_23104 iPseU_CNN:0.3391744;iRNA_PseU:0 23105 chr1 203682337 203682337 1 + C A UCEC 203682336 + 203682316 203682356 41 GATCTGGCCTAAGCTTCGGGTCCTGGCGCGATCTTCTCCCA GATCTGGCCTAAGCTTCGGGTACTGGCGCGATCTTCTCCCA < 41bp 0.439715132648748 0.822258473253439 0.13410243 0.58690923 prediction 0.644516946506878 Functional Gain - ATP2B4 ENSG00000058668 CDS Human protein_coding chr1:203682336 chr1:203682337 synonymous SNV . 0 22 hPsi_associated_SNPs_29381 0 0 1 0 2 Endoplasmic reticulum 0.438718005144503 0.438782427955941 0.17381846 0 hPsi_site_23105 iPseU_CNN:0.17381846;iRNA_PseU:0 23106 chr3 141497156 141497156 1 + G A CESC 141497155 + 141497135 141497175 41 CATGGGGGCCCTGGACAACCTGATCGCCAACACCGCCTACC CATGGGGGCCCTGGACAACCTAATCGCCAACACCGCCTACC < 41bp 0.412199458469669 0.822256157968318 0.16920882 0.4534733 prediction 0.644512315936635 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141497155 chr3:141497156 synonymous SNV . 0 22 hPsi_associated_SNPs_29382 0 0 1 0 0 exosome 0.438718561265058 0.438718590859819 0 0 hPsi_site_23106 iPseU_CNN:0;iRNA_PseU:0 23107 chr10 74884989 74884989 1 + C A UCEC 74884988 + 74884968 74885008 41 GTGCCCTTCCAATAATATAATCTATTATCCACAGGTAATTA GTGCCCTTCCAATAATATAATATATTATCCACAGGTAATTA < 41bp 0.466496487536885 0.822256130354919 0.23770806 0.25855047 prediction 0.644512260709838 Functional Gain - NUDT13 ENSG00000166321 CDS Human protein_coding chr10:74884988 chr10:74884989 synonymous SNV . 0 22 hPsi_associated_SNPs_29383 0 0 1 0 1 Cytosol 0.438718429157021 0.438718592995368 0 0 hPsi_site_23107 iPseU_CNN:0;iRNA_PseU:0 23108 chr18 29046595 29046595 1 + C A UCEC 29046594 + 29046574 29046614 41 AAAAAGATGCAGTTTGCAGTTCTTCACCTTCCGTGGTTGTC AAAAAGATGCAGTTTGCAGTTATTCACCTTCCGTGGTTGTC < 41bp 0.54465403599992 0.866909984957636 0.7222518 0.8389617 prediction 0.644511897915431 Functional Gain - DSG3 ENSG00000134757 CDS Human protein_coding chr18:29046594 chr18:29046595 nonsynonymous SNV 0.022 0 22 hPsi_associated_SNPs_29384 0 0 0 0 0 Nucleus 0.43871889398039 0.438791091158769 0.2334198 0 hPsi_site_23108 iPseU_CNN:0.2334198;iRNA_PseU:0 23109 chrX 152684208 152684208 1 + C A UCEC 152684207 + 152684187 152684227 41 TCTGGACCTCAGACAAAAGGTCCTCTACAAGCGGGTGATGC TCTGGACCTCAGACAAAAGGTACTCTACAAGCGGGTGATGC < 41bp 0.540827207111685 0.863082159937737 0.22896376 0.7492471 prediction 0.644509905652105 Functional Gain - ZFP92 ENSG00000189420 CDS Human protein_coding chrX:152684207 chrX:152684208 synonymous SNV . 0 22 hPsi_associated_SNPs_29385 0 0 0 0 2 nucleolus 0.438718592994316 0.438718555700084 0.4984942 0 hPsi_site_23109 iPseU_CNN:0.4984942;iRNA_PseU:0 23110 chr5 121488259 121488259 1 + G A LUAD 121488258 + 121488238 121488278 41 AGAAGCTGCAAGCCAAAGGGTGAGGGTCCCAGAGCACCACA AGAAGCTGCAAGCCAAAGGGTAAGGGTCCCAGAGCACCACA < 41bp 0.579160964988744 0.901410660277029 0.22245574 0.5465502 prediction 0.644499390576571 Functional Gain - ZNF474 ENSG00000164185 CDS Human protein_coding chr5:121488258 chr5:121488259 nonsynonymous SNV 0.632 0 22 hPsi_associated_SNPs_29386 0 0 0 0 0 membrane 0.438718592904133 0.438718582871305 0.0931004 0 hPsi_site_23110 iPseU_CNN:0.0931004;iRNA_PseU:0 23111 chr11 55587161 55587161 1 + C A LUSC 55587160 + 55587140 55587180 41 CGTTCACCCTCTTGGGCTTCTCAGATTACCCAGAACTGCAA CGTTCACCCTCTTGGGCTTCTAAGATTACCCAGAACTGCAA < 41bp 0.484585360186786 0.822249538378817 0.18131408 0.27398404 prediction 0.644499076757634 Functional Gain - OR5D18 ENSG00000186119 CDS Human protein_coding chr11:55587160 chr11:55587161 stopgain 0.539 0 22 hPsi_associated_SNPs_29387 0 0 0 0 0 unknown 0.43871860985464 0.438718237740052 0 0 hPsi_site_23111 iPseU_CNN:0;iRNA_PseU:0 23112 chr6 25726432 25726432 1 + G T LUSC 25726433 - 25726413 25726453 41 GACCATTGCCCAGGGCGGAGTCCTGCCTAACATTCAGGCAG GACCATTGCCCAGGGCGGAGTACTGCCTAACATTCAGGCAG < 41bp 0.51739375585502 0.839640918385108 0.11982447 0.36584908 prediction 0.644494325060176 Functional Gain - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726433 chr6:25726432 synonymous SNV . 0 22 hPsi_associated_SNPs_29388 0 0 1 0 0 unknown 0.438718614387475 0.438718517284652 0 0 hPsi_site_23112 iPseU_CNN:0;iRNA_PseU:0 23113 chr11 4843305 4843305 1 + C A UCEC 4843304 + 4843284 4843324 41 TGACTGCCCTTGCATCCTGCTCTCCTATATCCTGATCATTC TGACTGCCCTTGCATCCTGCTATCCTATATCCTGATCATTC < 41bp 0.485240203633968 0.822245364792402 0.19514495 0.42239624 prediction 0.644490729584804 Functional Gain - OR51F2 ENSG00000176925 CDS Human protein_coding chr11:4843304 chr11:4843305 synonymous SNV . 0 22 hPsi_associated_SNPs_29389 0 0 0 0 0 exosome 0.438778564367278 0.438724532274977 0 0 hPsi_site_23113 iPseU_CNN:0;iRNA_PseU:0 23114 chr20 61296406 61296406 1 + C T LUAD 61296407 - 61296387 61296427 41 AGCTTCTGAGGCACTCAGGCTGAACTGGGACTCCAAGAACT AGCTTCTGAGGCACTCAGGCTAAACTGGGACTCCAAGAACT < 41bp 0.432264697330598 0.822244230301098 0.26248813 0.71105075 prediction 0.644488460602197 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61296407 chr20:61296406 synonymous SNV . 0 22 hPsi_associated_SNPs_29390 0 0 0 0 0 Endoplasmic reticulum 0.438228655598971 0.438714524813378 0.4221015 0 hPsi_site_23114 iPseU_CNN:0.4221015;iRNA_PseU:0 23115 chr2 177017591 177017591 1 + C A UCEC 177017590 + 177017570 177017610 41 CGTCCTCATCTTCCTCCTCATCTTGCTCCTCCTCAGTCGCC CGTCCTCATCTTCCTCCTCATATTGCTCCTCCTCAGTCGCC < 41bp 0.540184256482612 0.862426637390553 0.37270656 0.8101662 prediction 0.644484761815881 Functional Gain - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177017590 chr2:177017591 nonsynonymous SNV 0.163 3 22 hPsi_associated_SNPs_29391 0 0 1 0 0 exosome 0.43874561935366 0.438706455293981 0.6203324 0 hPsi_site_23115 iPseU_CNN:0.6203324;iRNA_PseU:0 23116 chr7 150748970 150748970 1 + G A SKCM 150748969 + 150748949 150748989 41 GTGGAGCAGAAGAAGGCCTATGAGATGTCAGAGCTGCTTGG GTGGAGCAGAAGAAGGCCTATAAGATGTCAGAGCTGCTTGG < 41bp 0.407001127626403 0.822241548297152 0.2928654 0.31626928 prediction 0.644483096594304 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150748969 chr7:150748970 nonsynonymous SNV 0.883 3 22 hPsi_associated_SNPs_29392 0 0 0 0 2 exosome 0.438718592991764 0.438718591819405 0 0 hPsi_site_23116 iPseU_CNN:0;iRNA_PseU:0 23117 chr12 18891320 18891320 1 + G A LUSC 18891319 + 18891299 18891339 41 GATCTCTGTCTGCTTATCCGTGATGAAAAACTTATGCACCA GATCTCTGTCTGCTTATCCGTAATGAAAAACTTATGCACCA < 41bp 0.423709831679656 0.822235563363505 0.24775475 0.49804214 prediction 0.64447112672701 Functional Gain - CAPZA3 ENSG00000177938 CDS Human protein_coding chr12:18891319 chr12:18891320 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29393 0 0 0 0 0 unknown 0.442727847071918 0.429903361292848 0 0 hPsi_site_23117 iPseU_CNN:0;iRNA_PseU:0 23118 chr3 51426503 51426503 1 + G A LIHC 51426502 + 51426482 51426522 41 TATGCCCCCAAGGCAGCCAGTGCACGGACCGATTTGTAGTC TATGCCCCCAAGGCAGCCAGTACACGGACCGATTTGTAGTC < 41bp 0.417894016699352 0.822234545731265 0.20237973 0.5595164 prediction 0.644469091462531 Functional Gain - MANF ENSG00000145050 CDS Human protein_coding chr3:51426502 chr3:51426503 nonsynonymous SNV 0.988 1 22 hPsi_associated_SNPs_29394 0 0 1 0 0 Ribosome 0.438718591870524 0.438717897893013 0.1190328 0 hPsi_site_23118 iPseU_CNN:0.1190328;iRNA_PseU:0 23119 chr7 31146151 31146151 1 + G A SKCM 31146150 + 31146130 31146170 41 AAAATGGCGAAGCTGGAAGGTGAACCGTTACTTCGCTGTGG AAAATGGCGAAGCTGGAAGGTAAACCGTTACTTCGCTGTGG < 41bp 0.402890880386212 0.822223664286192 0.40698302 0.7159982 prediction 0.644447328572384 Functional Gain - ADCYAP1R1 ENSG00000078549 CDS Human protein_coding chr7:31146150 chr7:31146151 synonymous SNV . 0 22 hPsi_associated_SNPs_29395 0 0 0 0 1 exosome 0.442081081876744 0.438740962085676 0.4319964 0 hPsi_site_23119 iPseU_CNN:0.4319964;iRNA_PseU:0 23120 chr7 142983173 142983173 1 + C A BLCA 142983172 + 142983152 142983192 41 CATCACCCCCGTTGCTTATTTCTTTCTCACATTGGGTGGCT CATCACCCCCGTTGCTTATTTATTTCTCACATTGGGTGGCT < 41bp 0.549569389262441 0.871792344176792 0.27000567 0.354099 prediction 0.644445909828702 Functional Gain - TMEM139 ENSG00000178826 CDS Human protein_coding chr7:142983172 chr7:142983173 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_29396 0 0 0 0 0 Ribosome 0.438718592810359 0.438718591460851 0 0 hPsi_site_23120 iPseU_CNN:0;iRNA_PseU:0 23121 chr8 38251673 38251673 1 + G A UCEC 38251672 + 38251652 38251692 41 CCATTTATGGTGTTCTTAATTGTACCCTTCATGGAATTCTT CCATTTATGGTGTTCTTAATTATACCCTTCATGGAATTCTT < 41bp 0.532309876065717 0.85453237241037 0.23483053 0.29169196 prediction 0.644444992689305 Functional Gain - LETM2 ENSG00000165046 CDS Human protein_coding chr8:38251672 chr8:38251673 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29397 0 0 1 0 2 exosome 0.438718476939891 0.438717412079368 0 0 hPsi_site_23121 iPseU_CNN:0;iRNA_PseU:0 23122 chr7 143632988 143632988 1 + C A LUAD 143632987 + 143632967 143633007 41 TCTGTTGTCCTACATCCGGATCATCTCCACCATCCTAAAGA TCTGTTGTCCTACATCCGGATAATCTCCACCATCCTAAAGA < 41bp 0.520971829737308 0.843193638794391 0.19916773 0.6408031 prediction 0.644443618114167 Functional Gain - OR2F2 ENSG00000221910 CDS Human protein_coding chr7:143632987 chr7:143632988 synonymous SNV . 0 22 hPsi_associated_SNPs_29398 0 0 0 0 0 unknown 0.438718632929076 0.438718593078255 0.2816062 0 hPsi_site_23122 iPseU_CNN:0.2816062;iRNA_PseU:0 23123 chr5 172586982 172586982 1 + G T HNSC 172586981 + 172586961 172587001 41 CAGACATCCAGTACCATCACTGAGAGCCTCATGGGGATCAG CAGACATCCAGTACCATCACTTAGAGCCTCATGGGGATCAG < 41bp 0.479473188498902 0.822220580918418 0.30061483 0.6171302 prediction 0.644441161836836 Functional Gain - BNIP1 ENSG00000113734 CDS Human protein_coding chr5:172586981 chr5:172586982 stopgain 0.994 1 22 hPsi_associated_SNPs_29399 0 0 1 0 2 Ribosome 0.43667647795827 0.443351020184864 0.2342604 0 hPsi_site_23123 iPseU_CNN:0.2342604;iRNA_PseU:0 23124 chr3 186572160 186572160 1 + G T UCEC 186572161 - 186572141 186572181 41 GTTTTGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGGCA GTTTTGCTGATTGTAGAAGATATTGGTAAAGCGAATGGGCA < 41bp 0.48502909346687 0.822216786506671 0.27599612 0.40059513 prediction 0.644433573013342 Functional Gain - ADIPOQ ENSG00000181092 CDS Human protein_coding chr3:186572161 chr3:186572160 nonsynonymous SNV 0.992 4 22 hPsi_associated_SNPs_29400 0 0 0 0 0 exosome 0.438718618588108 0.438718486080637 0 0 hPsi_site_23124 iPseU_CNN:0;iRNA_PseU:0 23125 chr11 118454626 118454626 1 + G A GBM 118454625 + 118454605 118454645 41 GGCAAAAAAGCACCAGGATTTGGCGGATTTGGCAGCTCTGC GGCAAAAAAGCACCAGGATTTAGCGGATTTGGCAGCTCTGC < 41bp 0.394952275712408 0.82221631474653 0.22450069 0.43636358 prediction 0.644432629493061 Functional Gain - ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118454625 chr11:118454626 nonsynonymous SNV 0.996 1 22 hPsi_associated_SNPs_29401 0 0 1 0 0 Cytosol 0.4387185929921 0.43871859108217 0 0 hPsi_site_23125 iPseU_CNN:0;iRNA_PseU:0 23126 chr20 36028651 36028651 1 + G A OV 36028650 + 36028630 36028670 41 GCTGGTGCAGTTGTATGCTGTGGTTTCAGAGGAGCCCATTT GCTGGTGCAGTTGTATGCTGTAGTTTCAGAGGAGCCCATTT < 41bp 0.395518153951807 0.822209380807307 0.29633167 0.58789074 prediction 0.644418761614613 Functional Gain - SRC ENSG00000197122 CDS Human protein_coding chr20:36028650 chr20:36028651 synonymous SNV . 0 22 hPsi_associated_SNPs_29402 0 0 1 0 0 Ribosome 0.439119490070356 0.438718012562571 0.17578148 0 hPsi_site_23126 iPseU_CNN:0.17578148;iRNA_PseU:0 23127 chr1 155023697 155023697 1 + G A rs374953149 155023696 + 155023676 155023716 41 GCGCGCAGCGGGGCGGGCTTTGCCGGGGGCGGAGCTTGGCT GCGCGCAGCGGGGCGGGCTTTACCGGGGGCGGAGCTTGGCT < 41bp 0.469345071399282 0.822201609872258 0.3260643 0.74698794 prediction 0.644403219744516 Functional Gain - DCST1-AS1 ENSG00000143537;ENSG00000163357 upstream;downstream Human other chr1:155023696 chr1:155023697 . . 0 22 hPsi_associated_SNPs_29403 0 0 0 0 0 unknown 0.438718592995093 0.438718593090399 0.49397588 0 hPsi_site_23127 iPseU_CNN:0.49397588;iRNA_PseU:0 23128 chr8 145151497 145151497 1 + G A LUSC 145151496 + 145151476 145151516 41 TCTGGTCCTAGGCATGGTGGTGAGGACTACGTCTTCTCCCT TCTGGTCCTAGGCATGGTGGTAAGGACTACGTCTTCTCCCT < 41bp 0.58043902984106 0.90263078111488 0.38400662 0.7398315 prediction 0.64438350254764 Functional Gain - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151496 chr8:145151497 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29404 0 0 1 0 1 Ribosome 0.435907098327297 0.438718592995102 0.479663 0 hPsi_site_23128 iPseU_CNN:0.479663;iRNA_PseU:0 23129 chr3 9989117 9989117 1 + C T BLCA 9989118 - 9989098 9989138 41 GCTGGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCTCG GCTGGGAGCAGTGGCGCTGGTACATGGTGTAGGGTTGCTCG < 41bp 0.573375432910587 0.8955664974408 0.1913177 0.4127912 prediction 0.644382129060425 Functional Gain - PRRT3 ENSG00000163704 CDS Human protein_coding chr3:9989118 chr3:9989117 synonymous SNV . 0 22 hPsi_associated_SNPs_29405 0 0 1 0 0 nucleolus 0.438718593664998 0.438718594810209 0 0 hPsi_site_23129 iPseU_CNN:0;iRNA_PseU:0 23130 chr16 2223261 2223261 1 + G A UCEC 2223260 + 2223240 2223280 41 CGAGGGCCTGAAGGAGTTTCTGCAGCAGACGGATGACCGCT CGAGGGCCTGAAGGAGTTTCTACAGCAGACGGATGACCGCT < 41bp 0.396294897854547 0.822190885962494 0.284502 0.35244995 prediction 0.644381771924989 Functional Gain - TRAF7 ENSG00000131653 CDS Human protein_coding chr16:2223260 chr16:2223261 synonymous SNV . 0 22 hPsi_associated_SNPs_29406 0 0 1 0 1 Cytosol 0.438718591641624 0.438718606466245 0 0 hPsi_site_23130 iPseU_CNN:0;iRNA_PseU:0 23131 chr17 18324197 18324197 1 + C A rs564675987 18324196 + 18324176 18324216 41 CCACCTGGCTGCCGATGACTTCTGCACCAAGTGAGGCTGGG CCACCTGGCTGCCGATGACTTATGCACCAAGTGAGGCTGGG < 41bp 0.495555280067668 0.822190000744094 0.2802695 0.3295378 prediction 0.644380001488188 Functional Gain - LINC02076;KRT17P5 ENSG00000205266;ENSG00000240279 ncRNA_exonic Human other chr17:18324196 chr17:18324197 . . 0 22 hPsi_associated_SNPs_29407 0 0 0 0 0 unknown 0.438763613700276 0.43895384273921 0 0 hPsi_site_23131 iPseU_CNN:0;iRNA_PseU:0 23132 chr11 82642818 82642818 1 + C A BLCA 82642817 + 82642797 82642837 41 AGGTTCAGATGCCAGTAACTTCTTACAGCAATGCTCTGACC AGGTTCAGATGCCAGTAACTTATTACAGCAATGCTCTGACC < 41bp 0.471092809585478 0.822188811957291 0.33422172 0.32357714 prediction 0.644377623914583 Functional Gain - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82642817 chr11:82642818 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_29408 0 0 0 0 2 nucleus 0.438711001893557 0.438728656882621 0 0 hPsi_site_23132 iPseU_CNN:0;iRNA_PseU:0 23133 chr2 131487607 131487607 1 + G A HNSC 131487606 + 131487586 131487626 41 AGGTACCACCACATTGACTCTGGGACTCACACATGGCTCCT AGGTACCACCACATTGACTCTAGGACTCACACATGGCTCCT < 41bp 0.422497378983796 0.822187043253995 0.17118475 0.25554115 prediction 0.644374086507989 Functional Gain - GPR148 ENSG00000173302 CDS Human protein_coding chr2:131487606 chr2:131487607 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29409 0 0 0 0 0 unknown 0.476234421253325 0.445927618802658 0 0 hPsi_site_23133 iPseU_CNN:0;iRNA_PseU:0 23134 chr1 3669119 3669119 1 + C A LUSC 3669118 + 3669098 3669138 41 CACGGGAAAAGCCGGGCCTGTCCTCATTCAGGTCCACATTC CACGGGAAAAGCCGGGCCTGTACTCATTCAGGTCCACATTC < 41bp 0.518417816338866 0.840600263501638 0.3066631 0.7878135 prediction 0.644364894325544 Functional Gain - CCDC27 ENSG00000162592 CDS Human protein_coding chr1:3669118 chr1:3669119 nonsynonymous SNV 0.004 1 22 hPsi_associated_SNPs_29410 0 0 0 0 0 exosome 0.438718606189412 0.438719132419007 0.575627 0 hPsi_site_23134 iPseU_CNN:0.575627;iRNA_PseU:0 23135 chr3 157160188 157160188 1 + C A UCEC 157160187 + 157160167 157160207 41 CTATTTTATTCCCAATGCGTTCCAAGAAGATTTTTGGAAGC CTATTTTATTCCCAATGCGTTACAAGAAGATTTTTGGAAGC < 41bp 0.534324934015763 0.856505129334533 0.5760079 0.8620211 prediction 0.64436039063754 Functional Gain - PTX3 ENSG00000163661 CDS Human protein_coding chr3:157160187 chr3:157160188 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_29411 0 0 0 0 1 exosome 0.438718592556778 0.438718485554843 0.5720264 0 hPsi_site_23135 iPseU_CNN:0.5720264;iRNA_PseU:0 23136 chr19 7695473 7695473 1 + C A UCEC 7695472 + 7695452 7695492 41 ATTCCAGATGATAATCTACCTCACTTTCCCTGTGGCTATGT ATTCCAGATGATAATCTACCTAACTTTCCCTGTGGCTATGT < 41bp 0.531115054316905 0.853291902683013 0.21329698 0.3298632 prediction 0.644353696732216 Functional Gain - PET100 ENSG00000229833;ENSG00000268400 CDS Human other chr19:7695472 chr19:7695473 synonymous SNV . 0 22 hPsi_associated_SNPs_29412 0 0 1 0 2 Ribosome 0.438718463247619 0.438718601340805 0 0 hPsi_site_23136 iPseU_CNN:0;iRNA_PseU:0 23137 chr9 990301 990301 1 + G T LUSC 990300 + 990280 990320 41 ATTGAGGGCCCCTCGGGGACTGTTTCTCTGCCCTTCAGCTT ATTGAGGGCCCCTCGGGGACTTTTTCTCTGCCCTTCAGCTT < 41bp 0.506045267785582 0.828221052002653 0.37392724 0.48743215 prediction 0.644351568434143 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990300 chr9:990301 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_29413 0 0 0 0 0 unknown 0.438718696493973 0.438718698152736 0 0 hPsi_site_23137 iPseU_CNN:0;iRNA_PseU:0 23138 chr12 52699110 52699110 1 + C A LUAD 52699109 + 52699089 52699129 41 GGACCTGAACATGGACTGCATCATTGCCGAGATCAAGGCAC GGACCTGAACATGGACTGCATAATTGCCGAGATCAAGGCAC < 41bp 0.452003956182048 0.822170925388835 0.35474348 0.46356857 prediction 0.64434185077767 Functional Gain - KRT86 ENSG00000170442 CDS Human protein_coding chr12:52699109 chr12:52699110 synonymous SNV . 0 22 hPsi_associated_SNPs_29414 0 0 0 0 2 nucleus 0.437743759300382 0.438678463835166 0 0 hPsi_site_23138 iPseU_CNN:0;iRNA_PseU:0 23139 chr4 123797515 123797515 1 + C A UCEC 123797514 + 123797494 123797534 41 CAGAAGAGAGAGGAGTTGTGTCTATCAAAGGAGTGTGTGCT CAGAAGAGAGAGGAGTTGTGTATATCAAAGGAGTGTGTGCT < 41bp 0.47050018176525 0.82216988229549 0.268434 0.28282556 prediction 0.64433976459098 Functional Gain - FGF2 ENSG00000138685 CDS Human protein_coding chr4:123797514 chr4:123797515 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29415 0 0 1 0 2 Cytosol 0.441277154076137 0.446585030925677 0 0 hPsi_site_23139 iPseU_CNN:0;iRNA_PseU:0 23140 chr7 152140017 152140017 1 + C A UCEC 152140016 + 152139996 152140036 41 CCATGTCGCCTGTACTCGGATCTATGAAAAAGCACAATAAA CCATGTCGCCTGTACTCGGATATATGAAAAAGCACAATAAA < 41bp 0.500036844294304 0.822200656528497 0.7620319 0.8525734 prediction 0.644327624468386 Functional Gain - FABP5P3 ENSG00000241735 ncRNA_exonic Human transcribed_processed_pseudogene chr7:152140016 chr7:152140017 . . 0 22 hPsi_associated_SNPs_29416 0 0 0 3 0 unknown 0.438718594719574 0.438718593008646 0.181083 0 hPsi_site_23140 iPseU_CNN:0.181083;iRNA_PseU:0 23141 chr9 36147803 36147803 1 + G A LUAD 36147802 + 36147782 36147822 41 GCTTCCAAACAGTTTCATAATGAGGTCCTGAAGGCCCACAA GCTTCCAAACAGTTTCATAATAAGGTCCTGAAGGCCCACAA < 41bp 0.581594811476366 0.903757797550551 0.23572034 0.29871267 prediction 0.64432597214837 Functional Gain - GLIPR2 ENSG00000122694 CDS Human protein_coding chr9:36147802 chr9:36147803 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29417 0 0 0 0 2 Ribosome 0.438718832639201 0.438718592989854 0 0 hPsi_site_23141 iPseU_CNN:0;iRNA_PseU:0 23142 chr11 34474682 34474682 1 + C A rs148174786 34474681 + 34474661 34474701 41 AAGAGAAATCCTCAGACACATCTGAAGGATCCGGACATGGT AAGAGAAATCCTCAGACACATATGAAGGATCCGGACATGGT < 41bp 0.548982914585468 0.871142292175105 0.2311238 0.47027332 prediction 0.644318755179274 Functional Gain - CAT ENSG00000121691 CDS Human protein_coding chr11:34474681 chr11:34474682 nonsynonymous SNV 0.983 2 22 hPsi_associated_SNPs_29418 0 0 1 1 2 Ribosome 0.437938027531613 0.438722408520113 0 0 hPsi_site_23142 iPseU_CNN:0;iRNA_PseU:0 23143 chr11 55860936 55860936 1 + G A SKCM 55860935 + 55860915 55860955 41 ACTGATCACGTTAATCAGAATGGATTCTCAGCTTCACACCC ACTGATCACGTTAATCAGAATAGATTCTCAGCTTCACACCC < 41bp 0.553591793466342 0.875749077103431 0.2662444 0.30450845 prediction 0.644314567274178 Functional Gain - OR8I2 ENSG00000172154 CDS Human protein_coding chr11:55860935 chr11:55860936 nonsynonymous SNV 0.004 0 22 hPsi_associated_SNPs_29419 0 0 0 0 0 unknown 0.438713539831024 0.445273519082892 0 0 hPsi_site_23143 iPseU_CNN:0;iRNA_PseU:0 23144 chr18 55027344 55027344 1 + G A SKCM 55027343 + 55027323 55027363 41 GGATTTTGGCCGTTTGGATTTGACCCCAACACAAGGGAAGA GGATTTTGGCCGTTTGGATTTAACCCCAACACAAGGGAAGA < 41bp 0.423178225330183 0.822149577243826 0.21270469 0.69740355 prediction 0.644299154487651 Functional Gain - ST8SIA3 ENSG00000177511 CDS Human protein_coding chr18:55027343 chr18:55027344 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29420 0 0 0 0 0 unknown 0.438720082546908 0.438714730160808 0.3948071 0 hPsi_site_23144 iPseU_CNN:0.3948071;iRNA_PseU:0 23145 chr17 7259722 7259722 1 + C A COAD 7259721 + 7259701 7259741 41 TTCCCTGCAGGAAGTCAGGATCTTTGGGAAGCCAAGATTCT TTCCCTGCAGGAAGTCAGGATATTTGGGAAGCCAAGATTCT < 41bp 0.544079752601076 0.866228248658465 0.5970348 0.5520488 prediction 0.644296992114777 Functional Gain - TMEM95 ENSG00000182896 CDS Human protein_coding chr17:7259721 chr17:7259722 nonsynonymous SNV 0.985 3 22 hPsi_associated_SNPs_29421 0 0 0 0 3 unknown 0.438718592995105 0.438718573769749 0 0 hPsi_site_23145 iPseU_CNN:0;iRNA_PseU:0 23146 chr16 28975376 28975376 1 + G A rs75797916 28975375 + 28975355 28975395 41 CACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCT CACTTGGTGAGTTATGTGGGTATTGTTGCCCTGGGTGGCCT < 41bp 0.432127061165872 0.822145991013296 0.28296 0.4768523 prediction 0.644291982026593 Functional Gain - NFATC2IP ENSG00000260853 ncRNA_intronic Human antisense chr16:28975375 chr16:28975376 . . 0 22 hPsi_associated_SNPs_29422 0 0 1 0 0 Ribosome 0.438713455667174 0.438718436812263 0 0 hPsi_site_23146 iPseU_CNN:0;iRNA_PseU:0 23147 chr6 30594681 30594681 1 + G A COAD 30594680 + 30594660 30594700 41 GCCATGGAGTTCCCGTTCGATGTGGACGCGCTGTTCCCGGA GCCATGGAGTTCCCGTTCGATATGGACGCGCTGTTCCCGGA < 41bp 0.500669806499175 0.822814710872459 0.72500587 0.9431858 prediction 0.644289808746568 Functional Gain - ATAT1 ENSG00000137343 CDS Human protein_coding chr6:30594680 chr6:30594681 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29423 0 0 1 0 1 chromatin 0.438490635766163 0.438493405120738 0.43635986 0 hPsi_site_23147 iPseU_CNN:0.43635986;iRNA_PseU:0 23148 chr2 28627051 28627051 1 + G A UCEC 28627050 + 28627030 28627070 41 CATCACGACCAGCCAGGACCTGCAGTGGATGGTGCAGCCCA CATCACGACCAGCCAGGACCTACAGTGGATGGTGCAGCCCA < 41bp 0.39940509671406 0.822144625568542 0.4997536 0.5248123 prediction 0.644289251137084 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28627050 chr2:28627051 synonymous SNV . 0 22 hPsi_associated_SNPs_29424 0 0 0 0 1 Cytosol 0.438715773946545 0.438708249544856 0.0496246 0 hPsi_site_23148 iPseU_CNN:0.0496246;iRNA_PseU:0 23149 chr12 133151057 133151057 1 + G A CESC 133151056 + 133151036 133151076 41 GGGGGTGGCACCAGCCCCACTGAGCGCTTCCATCCTGTCGC GGGGGTGGCACCAGCCCCACTAAGCGCTTCCATCCTGTCGC < 41bp 0.403391527745523 0.822142251559389 0.20262995 0.30250347 prediction 0.644284503118778 Functional Gain - FBRSL1 ENSG00000112787 CDS Human protein_coding chr12:133151056 chr12:133151057 synonymous SNV . 0 22 hPsi_associated_SNPs_29425 0 0 0 0 1 chromatin 0.438714971410833 0.438718592950279 0 0 hPsi_site_23149 iPseU_CNN:0;iRNA_PseU:0 23150 chrX 115303769 115303769 1 + C A UCEC 115303768 + 115303748 115303788 41 AAAAGGGTCCTAAAAAGGTTTCTAGCATATACATCTTCAAC AAAAGGGTCCTAAAAAGGTTTATAGCATATACATCTTCAAC < 41bp 0.525888471521189 0.848027810980584 0.23143682 0.249105 prediction 0.644278678918791 Functional Gain - AGTR2 ENSG00000180772 CDS Human protein_coding chrX:115303768 chrX:115303769 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29426 0 0 0 0 0 unknown 0.438718591957667 0.438718592985385 0 0 hPsi_site_23150 iPseU_CNN:0;iRNA_PseU:0 23151 chr8 105368360 105368360 1 + C A COAD 105368359 + 105368339 105368379 41 TCTGTCTCTTCAGATTCATTTCTGGCTTCCAGTCCTGAAAA TCTGTCTCTTCAGATTCATTTATGGCTTCCAGTCCTGAAAA < 41bp 0.476608463824186 0.822139048593003 0.25509888 0.31314427 prediction 0.644278097186005 Functional Gain - DCSTAMP ENSG00000164935 CDS Human protein_coding chr8:105368359 chr8:105368360 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_29427 0 0 0 0 1 exosome 0.438713762418134 0.43874160153746 0 0 hPsi_site_23151 iPseU_CNN:0;iRNA_PseU:0 23152 chr3 45637492 45637492 1 + G A STAD 45637491 + 45637471 45637511 41 GGCTGGGGCCGAAGCCTGGCTGCACAGACCTTGGCACTGGT GGCTGGGGCCGAAGCCTGGCTACACAGACCTTGGCACTGGT < 41bp 0.554428563913989 0.876565414277074 0.3809083 0.72664154 prediction 0.64427370072617 Functional Gain - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637491 chr3:45637492 nonsynonymous SNV 0.071 1 22 hPsi_associated_SNPs_29428 0 0 1 0 0 Ribosome 0.439532160195733 0.440477097787444 0.45328308 0 hPsi_site_23152 iPseU_CNN:0.45328308;iRNA_PseU:0 23153 chr5 194952 194952 1 + G A LUAD 194951 + 194931 194971 41 GGACCTCAGTGGACACAACCTGGTCAGCCTGTACCCCTCGA GGACCTCAGTGGACACAACCTAGTCAGCCTGTACCCCTCGA < 41bp 0.428212042046734 0.822133878980307 0.22511843 0.3494643 prediction 0.644267757960614 Functional Gain - LRRC14B ENSG00000185028 CDS Human protein_coding chr5:194951 chr5:194952 synonymous SNV . 0 22 hPsi_associated_SNPs_29429 0 0 0 0 0 exosome 0.438718596028845 0.438719630678861 0 0 hPsi_site_23153 iPseU_CNN:0;iRNA_PseU:0 23154 chr1 162348772 162348772 1 + C A UCEC 162348771 + 162348751 162348791 41 TGGTCACTACGTAAAATGTGTCTTTCTTTTGTTTGTTTCCC TGGTCACTACGTAAAATGTGTATTTCTTTTGTTTGTTTCCC < 41bp 0.488302596221535 0.822132045596173 0.33597463 0.62873137 prediction 0.644264091192346 Functional Gain - C1orf226 ENSG00000239887 CDS Human protein_coding chr1:162348771 chr1:162348772 synonymous SNV . 0 22 hPsi_associated_SNPs_29430 0 0 1 0 1 nucleus 0.438692021422944 0.437733805967501 0.25746274 0 hPsi_site_23154 iPseU_CNN:0.25746274;iRNA_PseU:0 23155 chr17 78091545 78091545 1 + G A rs201183207 78091544 + 78091524 78091564 41 GGCTGGGTACATCATCCCCCTGCAGGTACCTGGGCCAGGCG GGCTGGGTACATCATCCCCCTACAGGTACCTGGGCCAGGCG < 41bp 0.575097569748153 0.897224698042015 0.2252855 0.48996133 prediction 0.644254256587725 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78091544 chr17:78091545 synonymous SNV . 0 22 hPsi_associated_SNPs_29431 2 0 1 0 1 Endoplasmic reticulum 0.438718519101779 0.439055722416278 0 0 hPsi_site_23155 iPseU_CNN:0;iRNA_PseU:0 23156 chr16 29394331 29394331 1 + G A BRCA 29394330 + 29394310 29394350 41 CTGACGCTCGGAAGGTGTCTTGAGATTATCATCCGCTGACG CTGACGCTCGGAAGGTGTCTTAAGATTATCATCCGCTGACG < 41bp 0.550964709795518 0.873091159848303 0.2506582 0.32484865 prediction 0.644252900105569 Functional Gain - NPIPB11 ENSG00000254206 CDS Human protein_coding chr16:29394330 chr16:29394331 nonsynonymous SNV 0.014 1 22 hPsi_associated_SNPs_29432 0 0 0 0 0 nucleoplasm 0.438538838165963 0.439239391216978 0 0 hPsi_site_23156 iPseU_CNN:0;iRNA_PseU:0 23157 chr15 68118726 68118726 1 + G T STAD 68118725 + 68118705 68118745 41 CCTTCGATGTGGTGCACGAGTGCGCGTGGGGCTCGCGTGGT CCTTCGATGTGGTGCACGAGTTCGCGTGGGGCTCGCGTGGT < 41bp 0.492249746846924 0.822116807696334 0.32801652 0.77160203 prediction 0.644233615392669 Functional Gain - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68118725 chr15:68118726 nonsynonymous SNV 0.977 5 22 hPsi_associated_SNPs_29433 0 0 0 0 0 exosome 0.439271288806592 0.436135250589559 0.54320406 0 hPsi_site_23157 iPseU_CNN:0.54320406;iRNA_PseU:0 23158 chr19 39972663 39972663 1 + C A UCEC 39972662 + 39972642 39972682 41 TGGTGGGACTGTGAGCGTCGTCTATATCTTTGGTGAGGGAC TGGTGGGACTGTGAGCGTCGTATATATCTTTGGTGAGGGAC < 41bp 0.452049208686912 0.822115910563037 0.33172178 0.47135594 prediction 0.644231821126074 Functional Gain - TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39972662 chr19:39972663 synonymous SNV . 0 22 hPsi_associated_SNPs_29434 0 0 1 0 1 Ribosome 0.438712599951055 0.438724077586195 0 0 hPsi_site_23158 iPseU_CNN:0;iRNA_PseU:0 23159 chr9 38396184 38396184 1 + C A LGG 38396183 + 38396163 38396203 41 GATGAGGTCATCAAGGTGTATCGGTACTTTGCTGGCTGGGC GATGAGGTCATCAAGGTGTATAGGTACTTTGCTGGCTGGGC < 41bp 0.458301543492696 0.822107222013671 0.22761908 0.3513811 prediction 0.644214444027342 Functional Gain - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396183 chr9:38396184 synonymous SNV . 0 22 hPsi_associated_SNPs_29435 0 0 1 0 0 Cytosol 0.439051473856189 0.438730659163017 0 0 hPsi_site_23159 iPseU_CNN:0;iRNA_PseU:0 23160 chr11 64807318 64807318 1 + C A rs144558475 64807317 + 64807297 64807337 41 CCTGCACTGCCAGCCCCTTCTCCTCTCCCCAGGGCCTGGCC CCTGCACTGCCAGCCCCTTCTACTCTCCCCAGGGCCTGGCC < 41bp 0.540703794963285 0.862805390514649 0.30918267 0.73142385 prediction 0.644203191102728 Functional Gain - ARL2-SNX15 ENSG00000110025;ENSG00000273003 UTR3 Human other chr11:64807317 chr11:64807318 . . 0 22 hPsi_associated_SNPs_29436 0 0 0 0 0 exosome 0.439638713113882 0.438562091604943 0.4628477 0 hPsi_site_23160 iPseU_CNN:0.4628477;iRNA_PseU:0 23161 chr15 31362109 31362109 1 + G A CESC 31362108 + 31362088 31362128 41 TATATCTCTTGGTTTTTCAATGAAATATCTAGGAAGATTGA TATATCTCTTGGTTTTTCAATAAAATATCTAGGAAGATTGA < 41bp 0.464297765773217 0.822100703452001 0.21531403 0.23532078 prediction 0.644201406904002 Functional Gain - TRPM1 ENSG00000134160 CDS Human protein_coding chr15:31362108 chr15:31362109 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_29437 0 0 0 0 0 Cytosol 0.43985543628893 0.438724523906899 0 0 hPsi_site_23161 iPseU_CNN:0;iRNA_PseU:0 23162 chr10 28971018 28971018 1 + G A LUSC 28971017 + 28970997 28971037 41 CCGGGCAGCGGTCATTGCCGTGCCCATTGCTGGAGGGCTGA CCGGGCAGCGGTCATTGCCGTACCCATTGCTGGAGGGCTGA < 41bp 0.580446250730286 0.902545534864501 0.17512763 0.42694184 prediction 0.644198568268431 Functional Gain - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971017 chr10:28971018 synonymous SNV . 0 22 hPsi_associated_SNPs_29438 0 0 1 0 0 Ribosome 0.438721608535506 0.438230768985365 0 0 hPsi_site_23162 iPseU_CNN:0;iRNA_PseU:0 23163 chr16 28841330 28841330 1 + G A CESC 28841329 + 28841309 28841349 41 ACTGAAGAGGAGAAGCACAGTGCAGTCCAGCGGCAGGGCTC ACTGAAGAGGAGAAGCACAGTACAGTCCAGCGGCAGGGCTC < 41bp 0.582545443815637 0.904644290134895 0.49945316 0.83308554 prediction 0.644197692638516 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28841329 chr16:28841330 nonsynonymous SNV 0.986 2 22 hPsi_associated_SNPs_29439 0 0 1 0 1 Cytosol 0.438715972473594 0.438718873349232 0.66617108 0 hPsi_site_23163 iPseU_CNN:0.66617108;iRNA_PseU:0 23164 chr12 56629008 56629008 1 + G A STAD 56629007 + 56628987 56629027 41 TCCCCTATCCCTGCTGCTGCTGCGGCTCCTGGGACCTCGTC TCCCCTATCCCTGCTGCTGCTACGGCTCCTGGGACCTCGTC < 41bp 0.392783571789346 0.822094849430345 0.281666 0.34994936 prediction 0.64418969886069 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56629007 chr12:56629008 synonymous SNV . 0 22 hPsi_associated_SNPs_29440 0 0 1 0 1 cytosol 0.438719055571446 0.438721073046902 0 0 hPsi_site_23164 iPseU_CNN:0;iRNA_PseU:0 23165 chr6 29895211 29895211 1 + G T rs116320595 29895212 - 29895192 29895232 41 TACCCGTGAGCTGCAGCGTCTCCTTCCCGTTCTCCAGGTGT TACCCGTGAGCTGCAGCGTCTACTTCCCGTTCTCCAGGTGT < 41bp 0.490393941554483 0.822094068373587 0.27036697 0.51001066 prediction 0.644188136747173 Functional Gain - HCG4B ENSG00000230795 ncRNA_exonic Human unprocessed_pseudogene chr6:29895212 chr6:29895211 . . 0 22 hPsi_associated_SNPs_29441 0 0 0 0 1 unknown 0.438718699976844 0.439274617429121 0.0200213199999999 0 hPsi_site_23165 iPseU_CNN:0.0200213199999999;iRNA_PseU:0 23166 chr17 56772420 56772420 1 + G A PAAD 56772419 + 56772399 56772439 41 TGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGG TGTACAGCACTGGAACTTCTTAAGCAGGAGCATACCCAGGG < 41bp 0.418993211636778 0.822090579522789 0.24018127 0.37013102 prediction 0.644181159045577 Functional Gain - RAD51C ENSG00000108384 CDS Human protein_coding chr17:56772419 chr17:56772420 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29442 1 0 1 1 0 Cytosol 0.43869788275754 0.438711930763696 0 0 hPsi_site_23166 iPseU_CNN:0;iRNA_PseU:0 23167 chr13 108882131 108882131 1 + C A CESC 108882130 + 108882110 108882150 41 CTTGATAAAACAAAAATTTTTCTTTTTGGCCGTTCCTTGGG CTTGATAAAACAAAAATTTTTATTTTTGGCCGTTCCTTGGG < 41bp 0.525042240723198 0.847129699219729 0.30317703 0.3687034 prediction 0.644174916993063 Functional Gain - ABHD13 ENSG00000139826 CDS Human protein_coding chr13:108882130 chr13:108882131 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29443 0 0 1 0 0 Cytosol 0.438718591947201 0.438718592995103 0 0 hPsi_site_23167 iPseU_CNN:0;iRNA_PseU:0 23168 chr16 19041675 19041675 1 + C A UCEC 19041674 + 19041654 19041694 41 GCCTCCCTGGCCCTGAGCCTTCTTTGGATAGTGAAAAGGTA GCCTCCCTGGCCCTGAGCCTTATTTGGATAGTGAAAAGGTA < 41bp 0.447726051837615 0.822083718033275 0.24256432 0.3873823 prediction 0.64416743606655 Functional Gain - TMC7 ENSG00000170537 CDS Human protein_coding chr16:19041674 chr16:19041675 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_29444 0 0 0 0 1 chromatin 0.438718592965893 0.438718592995102 0 0 hPsi_site_23168 iPseU_CNN:0;iRNA_PseU:0 23169 chr6 13601120 13601120 1 + G T HNSC 13601119 + 13601099 13601139 41 ATGTTTGCCCCCCAGGTGGCTGCCAGGGGCGTGCCAGTGGC ATGTTTGCCCCCCAGGTGGCTTCCAGGGGCGTGCCAGTGGC < 41bp 0.481474371114206 0.822080453965584 0.18927482 0.3511477 prediction 0.644160907931169 Functional Gain - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13601119 chr6:13601120 nonsynonymous SNV 0.978 0 22 hPsi_associated_SNPs_29445 0 0 1 0 2 Nucleus 0.438718592995029 0.438718593925691 0 0 hPsi_site_23169 iPseU_CNN:0;iRNA_PseU:0 23170 chr1 159410400 159410400 1 + C A UCEC 159410399 + 159410379 159410419 41 CAGAGAACATGACCAGCTGATCTCGGTGACCTACACTGTCA CAGAGAACATGACCAGCTGATATCGGTGACCTACACTGTCA < 41bp 0.469509105847249 0.822079865939315 0.27199358 0.6119218 prediction 0.644159731878629 Functional Gain - OR10J1 ENSG00000196184 CDS Human protein_coding chr1:159410399 chr1:159410400 synonymous SNV . 0 22 hPsi_associated_SNPs_29446 0 0 0 0 0 unknown 0.438711574583355 0.438732880780584 0.2238436 0 hPsi_site_23170 iPseU_CNN:0.2238436;iRNA_PseU:0 23171 chr11 6412943 6412943 1 + G A HNSC 6412942 + 6412922 6412962 41 GCACTGGGATCATGACTACCTGGAGGGCACGGACCCTGACT GCACTGGGATCATGACTACCTAGAGGGCACGGACCCTGACT < 41bp 0.579918872566434 0.901996938323386 0.20027274 0.49669224 prediction 0.644156131513905 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6412942 chr11:6412943 synonymous SNV . 0 22 hPsi_associated_SNPs_29447 0 0 1 0 0 Endoplasmic reticulum 0.43871859301172 0.438721341229311 0 0 hPsi_site_23171 iPseU_CNN:0;iRNA_PseU:0 23172 chr12 52700008 52700008 1 + G A CESC 52700007 + 52699987 52700027 41 GGAGGTGATGAACTCCAAGCTGGGCCTGGACATCGAGATCG GGAGGTGATGAACTCCAAGCTAGGCCTGGACATCGAGATCG < 41bp 0.399269298105807 0.822075027436074 0.16182879 0.27106822 prediction 0.644150054872149 Functional Gain - KRT86 ENSG00000170442 CDS Human protein_coding chr12:52700007 chr12:52700008 synonymous SNV . 0 22 hPsi_associated_SNPs_29448 0 0 0 0 1 nucleus 0.438718825569193 0.438718873994108 0 0 hPsi_site_23172 iPseU_CNN:0;iRNA_PseU:0 23173 chr20 43538879 43538879 1 + C A UCEC 43538878 + 43538858 43538898 41 CCATGCTCTATGAGAAGTTCTCTCCCGCCGGCCCCATCCTG CCATGCTCTATGAGAAGTTCTATCCCGCCGGCCCCATCCTG < 41bp 0.471086762557069 0.822073067645216 0.4948609 0.9183462 prediction 0.644146135290433 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43538878 chr20:43538879 nonsynonymous SNV 0.847 4 22 hPsi_associated_SNPs_29449 0 0 1 3 1 chromatin 0.43871859299416 0.43871859299492 0.8366924 0 hPsi_site_23173 iPseU_CNN:0.8366924;iRNA_PseU:0 23174 chr20 1281227 1281227 1 + G A UCEC 1281226 + 1281206 1281246 41 GCGCTCCATGAAATACACGCTGTGCAGTGACAACCATGGCA GCGCTCCATGAAATACACGCTATGCAGTGACAACCATGGCA < 41bp 0.395063893285017 0.822072431587882 0.75655437 0.8614253 prediction 0.644144863175763 Functional Gain - SNPH ENSG00000101298 CDS Human protein_coding chr20:1281226 chr20:1281227 synonymous SNV . 0 22 hPsi_associated_SNPs_29450 0 0 0 0 1 Endoplasmic reticulum 0.438724536148041 0.438722664916996 0.20974186 0 hPsi_site_23174 iPseU_CNN:0.20974186;iRNA_PseU:0 23175 chr6 138199825 138199825 1 + C A COAD 138199824 + 138199804 138199844 41 TCAGAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAAGCT TCAGAGAGGCGGCAAAAGAATAAAAACAAACTCCCAAAGCT < 41bp 0.447085186961789 0.822070659880755 0.6204786 0.62859833 prediction 0.64414131976151 Functional Gain - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138199824 chr6:138199825 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_29451 0 0 1 0 0 Cytosol 0.438704125564129 0.438716512818179 0.01623946 0 hPsi_site_23175 iPseU_CNN:0.01623946;iRNA_PseU:0 23176 chr10 88683388 88683388 1 + G A UCEC 88683387 + 88683367 88683407 41 TGAAGCTAATGTCAGAATGCTGGGCCCACAATCCAGCCTCC TGAAGCTAATGTCAGAATGCTAGGCCCACAATCCAGCCTCC < 41bp 0.425359359682768 0.822069488716216 0.16886461 0.27655292 prediction 0.644138977432433 Functional Gain - BMPR1A ENSG00000107779 CDS Human protein_coding chr10:88683387 chr10:88683388 stopgain 1.000 1 22 hPsi_associated_SNPs_29452 2 0 0 0 0 chromatin 0.43875977595354 0.444368614599681 0 0 hPsi_site_23176 iPseU_CNN:0;iRNA_PseU:0 23177 chr7 128369997 128369997 1 + G A GBM 128369996 + 128369976 128370016 41 GACAGCATCCCTTGCACCTGTGACCTACGTTGGAGGGCTTC GACAGCATCCCTTGCACCTGTAACCTACGTTGGAGGGCTTC < 41bp 0.405348800591717 0.822068729859993 0.2769063 0.36679626 prediction 0.644137459719986 Functional Gain - FAM71F1 ENSG00000135248 CDS Human protein_coding chr7:128369996 chr7:128369997 nonsynonymous SNV 0.163 3 22 hPsi_associated_SNPs_29453 0 0 0 0 1 exosome 0.438718592995102 0.438718592995103 0 0 hPsi_site_23177 iPseU_CNN:0;iRNA_PseU:0 23178 chr1 202097547 202097547 1 + G A CESC 202097546 + 202097526 202097566 41 TGCTGCTGCTGCTGCTGCTGTGAGGAGTGCGGCGGGGCTTC TGCTGCTGCTGCTGCTGCTGTAAGGAGTGCGGCGGGGCTTC < 41bp 0.404444388315547 0.822065812235868 0.2674564 0.42226 prediction 0.644131624471737 Functional Gain - GPR37L1 ENSG00000170075 CDS Human protein_coding chr1:202097546 chr1:202097547 nonsynonymous SNV 0.101 0 22 hPsi_associated_SNPs_29454 0 0 0 0 0 Nucleus 0.438700354871385 0.438718053661065 0 0 hPsi_site_23178 iPseU_CNN:0;iRNA_PseU:0 23179 chr7 89791258 89791258 1 + G A COAD 89791257 + 89791237 89791277 41 AATAAAGAAGATGCCTGGATTGAGCATGATGTTTGGAGAAT AATAAAGAAGATGCCTGGATTAAGCATGATGTTTGGAGAAT < 41bp 0.41506817620994 0.822060732420169 0.25270882 0.26079422 prediction 0.644121464840337 Functional Gain - STEAP1 ENSG00000164647 CDS Human protein_coding chr7:89791257 chr7:89791258 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29455 0 0 0 0 1 Endoplasmic reticulum 0.453624753193405 0.430095294364512 0 0 hPsi_site_23179 iPseU_CNN:0;iRNA_PseU:0 23180 chr3 113342559 113342559 1 + C A UCEC 113342558 + 113342538 113342578 41 TGCCGCCCTATATTTTTTCTTCCAGAATCTCAGCAGCTGGG TGCCGCCCTATATTTTTTCTTACAGAATCTCAGCAGCTGGG < 41bp 0.546330490557049 0.868391024639311 0.22112611 0.4207493 prediction 0.644121068164524 Functional Gain - SIDT1 ENSG00000072858 CDS Human protein_coding chr3:113342558 chr3:113342559 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29456 0 0 0 0 2 exosome 0.438722816683071 0.438476910402536 0 0 hPsi_site_23180 iPseU_CNN:0;iRNA_PseU:0 23181 chr5 1035578 1035578 1 + G A UCEC 1035577 + 1035557 1035597 41 GTGGCTGACAGGAGGTTGTCTGCACACGTCAGGTGAGGGCT GTGGCTGACAGGAGGTTGTCTACACACGTCAGGTGAGGGCT < 41bp 0.422403360918006 0.822054222301131 0.23846513 0.27745503 prediction 0.644108444602262 Functional Gain - NKD2 ENSG00000145506 CDS Human protein_coding chr5:1035577 chr5:1035578 nonsynonymous SNV 0.572 0 22 hPsi_associated_SNPs_29457 0 0 0 0 2 exosome 0.438708074262052 0.438684250805869 0 0 hPsi_site_23181 iPseU_CNN:0;iRNA_PseU:0 23182 chr11 5068575 5068575 1 + C A LUAD 5068574 + 5068554 5068594 41 CACCAAATACCAGGTTACATTCACATTCTTGTTGCCAATCT CACCAAATACCAGGTTACATTAACATTCTTGTTGCCAATCT < 41bp 0.49285241492859 0.822053390984192 0.14995924 0.24628577 prediction 0.644106781968384 Functional Gain - OR52J3 ENSG00000205495 CDS Human protein_coding chr11:5068574 chr11:5068575 nonsynonymous SNV 0.840 2 22 hPsi_associated_SNPs_29458 0 0 0 0 0 unknown 0.4357754951805 0.438050333144176 0 0 hPsi_site_23182 iPseU_CNN:0;iRNA_PseU:0 23183 chr1 248525048 248525048 1 + C A LUSC 248525047 + 248525027 248525067 41 CTCTTCAGACAATCCAAACATCCAGCACTACTTTGTGTGGT CTCTTCAGACAATCCAAACATACAGCACTACTTTGTGTGGT < 41bp 0.520248783954866 0.842287952569311 0.23381642 0.2883097 prediction 0.64407833722889 Functional Gain - OR2T4 ENSG00000196944 CDS Human protein_coding chr1:248525047 chr1:248525048 nonsynonymous SNV 0.106 0 22 hPsi_associated_SNPs_29459 0 0 0 0 0 unknown 0.438736585309008 0.43868620247597 0 0 hPsi_site_23183 iPseU_CNN:0;iRNA_PseU:0 23184 chr1 86919189 86919189 1 + C A LIHC 86919188 + 86919168 86919208 41 GGCCCCCACCCTGATGTGTTTCCACCATGCAAAATTATTGA GGCCCCCACCCTGATGTGTTTACACCATGCAAAATTATTGA < 41bp 0.544399237303062 0.866433987571673 0.24733502 0.55385935 prediction 0.644069500537222 Functional Gain - CLCA2 ENSG00000137975 CDS Human protein_coding chr1:86919188 chr1:86919189 nonsynonymous SNV 0.938 2 22 hPsi_associated_SNPs_29460 0 0 0 0 0 exosome 0.438718592995102 0.438718593061105 0.1077187 0 hPsi_site_23184 iPseU_CNN:0.1077187;iRNA_PseU:0 23185 chr1 167960476 167960476 1 + C A KIRC 167960475 + 167960455 167960495 41 ACTGTCGACGTGCTGCCACGTCTGTTGCTATTTGCCCACCA ACTGTCGACGTGCTGCCACGTATGTTGCTATTTGCCCACCA < 41bp 0.546317029829129 0.868350362594672 0.31070763 0.6434995 prediction 0.644066665531085 Functional Gain - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:167960475 chr1:167960476 nonsynonymous SNV 0.884 4 22 hPsi_associated_SNPs_29461 0 0 1 0 1 Cytosol 0.433076775841941 0.436539877043972 0.286999 0 hPsi_site_23185 iPseU_CNN:0.286999;iRNA_PseU:0 23186 chr20 61596999 61596999 1 + G A UCEC 61596998 + 61596978 61597018 41 TCTCCAGCGTCTTTGCTCTGTGCCTGGGCCACACCTCCAGC TCTCCAGCGTCTTTGCTCTGTACCTGGGCCACACCTCCAGC < 41bp 0.584300392724493 0.906331391313715 0.3649813 0.8923612 prediction 0.644061997178444 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61596998 chr20:61596999 nonsynonymous SNV 0.441 1 22 hPsi_associated_SNPs_29462 0 0 1 0 2 Ribosome 0.438951552031778 0.439212007743971 0.7847224 0 hPsi_site_23186 iPseU_CNN:0.7847224;iRNA_PseU:0 23187 chr6 34497531 34497531 1 + G T SARC 34497530 + 34497510 34497550 41 TGGAGCAGGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAG TGGAGCAGGTGTTTGAGCAATTCCAGCAATTTGAGGAAAAG < 41bp 0.482861054867921 0.822030754723465 0.2142407 0.26594085 prediction 0.64406150944693 Functional Gain - PACSIN1 ENSG00000124507 CDS Human protein_coding chr6:34497530 chr6:34497531 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_29463 0 0 0 0 2 nucleoplasm 0.439946793188528 0.438674419031887 0 0 hPsi_site_23187 iPseU_CNN:0;iRNA_PseU:0 23188 chr14 24839756 24839756 1 + C A rs2229310 24839755 + 24839735 24839775 41 CCTGGCAGTGCCCTCCCCACTCGCTTGGTCCAAGGCCCGGA CCTGGCAGTGCCCTCCCCACTAGCTTGGTCCAAGGCCCGGA < 41bp 0.498901283227055 0.822028564961917 0.2664797 0.31607503 prediction 0.644057129923834 Functional Gain - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24839755 chr14:24839756 synonymous SNV . 0 22 hPsi_associated_SNPs_29464 0 0 0 0 1 cytosol 0.438718592355874 0.438718592994593 0 0 hPsi_site_23188 iPseU_CNN:0;iRNA_PseU:0 23189 chr3 126153142 126153142 1 + G A GBM 126153141 + 126153121 126153161 41 ATCATTGAGCACCAGCTGGATGAGCTGCTAGAGAACCTGGA ATCATTGAGCACCAGCTGGATAAGCTGCTAGAGAACCTGGA < 41bp 0.39701372521308 0.822028103718572 0.2442548 0.41640025 prediction 0.644056207437144 Functional Gain - CFAP100 ENSG00000163885 CDS Human protein_coding chr3:126153141 chr3:126153142 nonsynonymous SNV 0.961 4 22 hPsi_associated_SNPs_29465 0 0 0 0 1 nucleus 0.436381092781925 0.440442015596872 0 0 hPsi_site_23189 iPseU_CNN:0;iRNA_PseU:0 23190 chr11 101954774 101954774 1 + G A rs7943098 101954773 + 101954753 101954793 41 AAAAAGGTTCTGAAAGTGGTTGTAAACTCTTGTATCACATA AAAAAGGTTCTGAAAGTGGTTATAAACTCTTGTATCACATA < 41bp 0.51960878278373 0.841630727768087 0.44648695 0.75596017 prediction 0.644043889968714 Functional Gain - C11orf70 ENSG00000137691 UTR3 Human protein_coding chr11:101954773 chr11:101954774 . . 0 22 hPsi_associated_SNPs_29466 0 0 0 0 0 exosome 0.439542477393441 0.441071572755025 0.51192034 0 hPsi_site_23190 iPseU_CNN:0.51192034;iRNA_PseU:0 23191 chr21 40762689 40762689 1 + G A HNSC 40762688 + 40762668 40762708 41 GAGAGCGGAGATCCAGGACATGAAGCAGGAGCTCTCCACAG GAGAGCGGAGATCCAGGACATAAAGCAGGAGCTCTCCACAG < 41bp 0.580988505308715 0.903006942539142 0.2458295 0.31601125 prediction 0.644036874460856 Functional Gain - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40762688 chr21:40762689 nonsynonymous SNV 0.611 4 22 hPsi_associated_SNPs_29467 0 0 1 0 1 unknown 0.438718592995199 0.438718355681767 0 0 hPsi_site_23191 iPseU_CNN:0;iRNA_PseU:0 23192 chr3 126735383 126735383 1 + G T LUAD 126735382 + 126735362 126735402 41 GGAACTCCCGTGAGATCCGGTGCCTGACACCCCCCGGGCAG GGAACTCCCGTGAGATCCGGTTCCTGACACCCCCCGGGCAG < 41bp 0.510728784861383 0.832745972293851 0.2825024 0.8102851 prediction 0.644034374864935 Functional Gain - PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126735382 chr3:126735383 nonsynonymous SNV 0.879 4 22 hPsi_associated_SNPs_29468 0 0 1 0 1 Ribosome 0.438718592979268 0.438718607504606 0.6205702 0 hPsi_site_23192 iPseU_CNN:0.6205702;iRNA_PseU:0 23193 chr11 67047153 67047153 1 + G T SARC 67047152 + 67047132 67047172 41 CCACCTGGGGAAGAAGCAGGTGCCTCCGGATCTCTTCCAGG CCACCTGGGGAAGAAGCAGGTTCCTCCGGATCTCTTCCAGG < 41bp 0.496698697382942 0.822015505513322 0.5320865 0.6523161 prediction 0.644031011026644 Functional Gain - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047152 chr11:67047153 synonymous SNV . 0 22 hPsi_associated_SNPs_29469 0 0 1 0 2 chromatin 0.438718592995099 0.438718593004795 0.2404592 0 hPsi_site_23193 iPseU_CNN:0.2404592;iRNA_PseU:0 23194 chr19 17919039 17919039 1 + G A LUSC 17919038 + 17919018 17919058 41 CAAGGTACGGGGTTTGCAGCTGCGCCTCCTCTTCCTGGTGG CAAGGTACGGGGTTTGCAGCTACGCCTCCTCTTCCTGGTGG < 41bp 0.580163435653536 0.902175962810237 0.57277894 0.8386667 prediction 0.644025054313402 Functional Gain - B3GNT3 ENSG00000179913 CDS Human protein_coding chr19:17919038 chr19:17919039 synonymous SNV . 0 22 hPsi_associated_SNPs_29470 0 0 1 0 0 Ribosome 0.438718074718584 0.438718591474718 0.53177552 0 hPsi_site_23194 iPseU_CNN:0.53177552;iRNA_PseU:0 23195 chr20 44665941 44665941 1 + G T BRCA 44665940 + 44665920 44665960 41 AGGTCTCTGGGCCCAGAGTTTGGGGGTGCCGTGGGCCTCTG AGGTCTCTGGGCCCAGAGTTTTGGGGTGCCGTGGGCCTCTG < 41bp 0.49899562089488 0.822011118701507 0.3292563 0.34332684 prediction 0.644022237403014 Functional Gain - SLC12A5 ENSG00000124140 CDS Human protein_coding chr20:44665940 chr20:44665941 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29471 0 0 0 0 2 cytosol 0.438718582785222 0.438718597974514 0 0 hPsi_site_23195 iPseU_CNN:0;iRNA_PseU:0 23196 chr18 7231139 7231139 1 + G A HNSC 7231138 + 7231118 7231158 41 GACTAGAAGGGAAGGTACAATGGGGGCCAGGCAGTCAAGGG GACTAGAAGGGAAGGTACAATAGGGGCCAGGCAGTCAAGGG < 41bp 0.439519133997661 0.822006216342768 0.23192427 0.5498384 prediction 0.644012432685536 Functional Gain - LRRC30 ENSG00000206422 CDS Human protein_coding chr18:7231138 chr18:7231139 nonsynonymous SNV 0.877 4 22 hPsi_associated_SNPs_29472 0 0 0 0 0 unknown 0.438573190331787 0.438718902034239 0.0996767999999999 0 hPsi_site_23196 iPseU_CNN:0.0996767999999999;iRNA_PseU:0 23197 chr7 128446848 128446848 1 + G A PRAD 128446847 + 128446827 128446867 41 AGCTGCAGGAGGAGCTGCAGTGCCATGAGGCAGAGCTGCAG AGCTGCAGGAGGAGCTGCAGTACCATGAGGCAGAGCTGCAG < 41bp 0.403424017286646 0.822005926351179 0.24093372 0.37189174 prediction 0.644011852702358 Functional Gain - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128446847 chr7:128446848 nonsynonymous SNV 0.864 0 22 hPsi_associated_SNPs_29473 0 0 0 0 1 chromatin 0.438721825955355 0.438716972106287 0 0 hPsi_site_23197 iPseU_CNN:0;iRNA_PseU:0 23198 chr5 56542948 56542948 1 + C A GBM 56542947 + 56542927 56542967 41 AAGAAAATAAAGTTGGAACTTCTTTCCCTCATGAGTCCACA AAGAAAATAAAGTTGGAACTTATTTCCCTCATGAGTCCACA < 41bp 0.528640249357896 0.850644266995528 0.3324415 0.32514173 prediction 0.644008035275262 Functional Gain - GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56542947 chr5:56542948 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29474 0 0 1 1 2 Ribosome 0.438718566638188 0.438716388354147 0 0 hPsi_site_23198 iPseU_CNN:0;iRNA_PseU:0 23199 chr4 39408728 39408728 1 + C A UCEC 39408727 + 39408707 39408747 41 GCTACGAGCTGTTACTGGATTCTCTGGAGATGGAAGAGCTA GCTACGAGCTGTTACTGGATTATCTGGAGATGGAAGAGCTA < 41bp 0.534335457584723 0.856331523028546 0.37603307 0.72920483 prediction 0.643992130887646 Functional Gain - KLB ENSG00000134962 CDS Human protein_coding chr4:39408727 chr4:39408728 nonsynonymous SNV 0.281 0 22 hPsi_associated_SNPs_29475 0 0 0 0 0 Cytosol 0.438718592317333 0.4387185940227 0.45840966 0 hPsi_site_23199 iPseU_CNN:0.45840966;iRNA_PseU:0 23200 chr17 7476166 7476166 1 + G A SKCM 7476165 + 7476145 7476185 41 TAGTTTCTAAGGATCATGTCTGCGAGCCAGGATTCCCGGTA TAGTTTCTAAGGATCATGTCTACGAGCCAGGATTCCCGGTA < 41bp 0.41711018718926 0.821990910489586 0.22156557 0.30271733 prediction 0.643981820979171 Functional Gain - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476165 chr17:7476166 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29476 0 0 1 0 1 Cytosol 0.438718977033143 0.438718802742381 0 0 hPsi_site_23200 iPseU_CNN:0;iRNA_PseU:0 23201 chr12 102590926 102590926 1 + G T BLCA 102590927 - 102590907 102590947 41 CACAGGCTCCAAACATAATTTCTTAAATCATGGTCTGCCAC CACAGGCTCCAAACATAATTTATTAAATCATGGTCTGCCAC < 41bp 0.534629289021418 0.85661909052635 0.27181995 0.35216826 prediction 0.643979603009862 Functional Gain - PMCH ENSG00000183395 CDS Human protein_coding chr12:102590927 chr12:102590926 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_29477 0 0 0 0 1 exosome 0.438718593119262 0.438718420624481 0 0 hPsi_site_23201 iPseU_CNN:0;iRNA_PseU:0 23202 chr1 152659418 152659418 1 + G A COAD 152659417 + 152659397 152659437 41 TAAGTGTCCCCCTAAATGCCTGCCCCAGTGCCCAGCTCCAT TAAGTGTCCCCCTAAATGCCTACCCCAGTGCCCAGCTCCAT < 41bp 0.415998194526339 0.821985756272504 0.23694313 0.4255185 prediction 0.643971512545007 Functional Gain - LCE2B ENSG00000159455 CDS Human protein_coding chr1:152659417 chr1:152659418 synonymous SNV . 0 22 hPsi_associated_SNPs_29478 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0 0 hPsi_site_23202 iPseU_CNN:0;iRNA_PseU:0 23203 chr1 231954112 231954112 1 + G T BLCA 231954113 - 231954093 231954133 41 CTCTGATGTTAATGATCTAATCTCCTCGGTGAGGTCTTTAG CTCTGATGTTAATGATCTAATATCCTCGGTGAGGTCTTTAG < 41bp 0.485756337572971 0.821981106741985 0.26531166 0.41453165 prediction 0.643962213483969 Functional Gain - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231954113 chr1:231954112 nonsynonymous SNV 0.950 4 22 hPsi_associated_SNPs_29479 0 0 0 0 0 Nucleus 0.43871856405392 0.438718592881258 0 0 hPsi_site_23203 iPseU_CNN:0;iRNA_PseU:0 23204 chr16 14958483 14958483 1 + G A LUSC 14958482 + 14958462 14958502 41 AACCAGAGCAGGGCTGACGTTGAAACCCCAGACATTTCCTC AACCAGAGCAGGGCTGACGTTAAAACCCCAGACATTTCCTC < 41bp 0.589186637414872 0.911157902463348 0.72853816 0.8571035 prediction 0.643942530096953 Functional Gain - NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14958482 chr16:14958483 synonymous SNV . 0 22 hPsi_associated_SNPs_29480 0 0 1 0 1 Nucleus 0.438718590679573 0.438718592596095 0.25713068 0 hPsi_site_23204 iPseU_CNN:0.25713068;iRNA_PseU:0 23205 chr19 54410095 54410095 1 + C A BLCA 54410094 + 54410074 54410114 41 CACCTACGTGAACCCCGACTTCGTGCACCCGGATGCCCGCA CACCTACGTGAACCCCGACTTAGTGCACCCGGATGCCCGCA < 41bp 0.463046891427879 0.821969017413301 0.29579467 0.68776333 prediction 0.643938034826602 Functional Gain - PRKCG ENSG00000126583 CDS Human protein_coding chr19:54410094 chr19:54410095 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29481 0 0 0 0 1 Cytosol 0.438718986024194 0.438718131310062 0.37552666 0 hPsi_site_23205 iPseU_CNN:0.37552666;iRNA_PseU:0 23206 chr19 47858583 47858583 1 + G T SARC 47858582 + 47858562 47858602 41 CAATGCCCCTGTGGTACAGGTGCCTGGGAGGCTGTTCCCCA CAATGCCCCTGTGGTACAGGTTCCTGGGAGGCTGTTCCCCA < 41bp 0.514165152855769 0.836128205131761 0.23684329 0.3062814 prediction 0.643926104551983 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858582 chr19:47858583 synonymous SNV . 0 22 hPsi_associated_SNPs_29482 0 0 1 0 1 Ribosome 0.438742785672433 0.438718581462521 0 0 hPsi_site_23206 iPseU_CNN:0;iRNA_PseU:0 23207 chr7 150768592 150768592 1 + G A ESCA 150768591 + 150768571 150768611 41 GCGCCGCTATCCCCACTACCTGAGTGACTTCCGAGATGCAC GCGCCGCTATCCCCACTACCTAAGTGACTTCCGAGATGCAC < 41bp 0.400879612335197 0.821961964527273 0.25763467 0.5724591 prediction 0.643923929054546 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150768591 chr7:150768592 synonymous SNV . 0 22 hPsi_associated_SNPs_29483 0 0 1 0 0 Ribosome 0.438717132592628 0.438481532043686 0.1449182 0 hPsi_site_23207 iPseU_CNN:0.1449182;iRNA_PseU:0 23208 chr8 17478590 17478590 1 + G T HNSC 17478589 + 17478569 17478609 41 GAATGAGCGCTACGGCCAGTTGACTCTGGTCAACTCCACCT GAATGAGCGCTACGGCCAGTTTACTCTGGTCAACTCCACCT < 41bp 0.485419087234669 0.82196119109346 0.1822283 0.7616035 prediction 0.643922382186919 Functional Gain - PDGFRL ENSG00000104213 CDS Human protein_coding chr8:17478589 chr8:17478590 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29484 0 0 0 0 0 exosome 0.438724215079455 0.438717360655162 0.523207 0 hPsi_site_23208 iPseU_CNN:0.523207;iRNA_PseU:0 23209 chr2 26951339 26951339 1 + G A PAAD 26951338 + 26951318 26951358 41 CGCCCTCGCGACGCTGCCTGTGCAGCGGGGCGCCACGCTCC CGCCCTCGCGACGCTGCCTGTACAGCGGGGCGCCACGCTCC < 41bp 0.419445288067871 0.821957787777158 0.3064949 0.9330239 prediction 0.643915575554316 Functional Gain - KCNK3 ENSG00000171303 CDS Human protein_coding chr2:26951338 chr2:26951339 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_29485 0 0 0 0 0 Cytosol 0.438733284585322 0.438529313871095 0.8660478 0 hPsi_site_23209 iPseU_CNN:0.8660478;iRNA_PseU:0 23210 chr1 180914453 180914453 1 + C T rs116827264 180914454 - 180914434 180914474 41 ACACTGAGGGCACGCCGTGGTGAAGTCTTGGCCGGCCTGCG ACACTGAGGGCACGCCGTGGTAAAGTCTTGGCCGGCCTGCG < 41bp 0.574417281431436 0.896368947522473 0.34605408 0.62654537 prediction 0.643903332182075 Functional Gain - KIAA1614 ENSG00000135835 CDS Human protein_coding chr1:180914454 chr1:180914453 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_29486 0 0 0 0 0 nucleus 0.43871926216169 0.438718592996734 0.25309074 0 hPsi_site_23210 iPseU_CNN:0.25309074;iRNA_PseU:0 23211 chr6 7402900 7402900 1 + C A UCEC 7402899 + 7402879 7402919 41 CAATCAAAATTTATAAAACTTCTATTTTGGTGTTCAAAGAT CAATCAAAATTTATAAAACTTATATTTTGGTGTTCAAAGAT < 41bp 0.469456549946721 0.821951447984138 0.31484103 0.30107188 prediction 0.643902895968277 Functional Gain - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7402899 chr6:7402900 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29487 0 0 1 0 2 Ribosome 0.438715452331366 0.438730459420605 0 0 hPsi_site_23211 iPseU_CNN:0;iRNA_PseU:0 23212 chr19 57910872 57910872 1 + G A UCEC 57910871 + 57910851 57910891 41 GGAAATCATTTAGGTACCACTGCAGGCTCATTAGACACCAG GGAAATCATTTAGGTACCACTACAGGCTCATTAGACACCAG < 41bp 0.427756973501246 0.82194797231604 0.34568134 0.5921455 prediction 0.64389594463208 Functional Gain - ZNF548 ENSG00000188785 CDS Human protein_coding chr19:57910871 chr19:57910872 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_29488 0 0 1 0 0 Nucleus 0.438718591566653 0.438718592701992 0.184291 0 hPsi_site_23212 iPseU_CNN:0.184291;iRNA_PseU:0 23213 chr4 139966385 139966385 1 + G A BLCA 139966384 + 139966364 139966404 41 GAACAGCGCCTACAAGCTGCTGAGTGCTGATGGGCAGTCAG GAACAGCGCCTACAAGCTGCTAAGTGCTGATGGGCAGTCAG < 41bp 0.580646443948854 0.902592955281683 0.20048168 0.5294703 prediction 0.643893022665659 Functional Gain - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966384 chr4:139966385 synonymous SNV . 0 22 hPsi_associated_SNPs_29489 0 0 0 0 0 chromatin 0.438677108815372 0.438712017557163 0.0589405999999999 0 hPsi_site_23213 iPseU_CNN:0.0589405999999999;iRNA_PseU:0 23214 chr22 43558910 43558910 1 + G A rs142042960 43558909 + 43558889 43558929 41 CCGCCTGCTCTACCCCTACCTGGCCTGGCTGGCCTTCACGA CCGCCTGCTCTACCCCTACCTAGCCTGGCTGGCCTTCACGA < 41bp 0.41899655562944 0.821943947999875 0.2652013 0.3438546 prediction 0.64388789599975 Functional Gain - TSPO ENSG00000100300 CDS Human protein_coding chr22:43558909 chr22:43558910 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_29490 0 0 1 0 0 Ribosome 0.438718766013105 0.438724271605829 0 0 hPsi_site_23214 iPseU_CNN:0;iRNA_PseU:0 23215 chr4 90034730 90034730 1 + G A rs78983503 90034729 + 90034709 90034749 41 CTGACCAAAGTACTTCTGGGTGTAGGTCAAGCAGAGAGAGA CTGACCAAAGTACTTCTGGGTATAGGTCAAGCAGAGAGAGA < 41bp 0.563271342344659 0.885212772234639 0.24391875 0.68943024 prediction 0.64388285977996 Functional Gain - TIGD2 ENSG00000180346 CDS Human protein_coding chr4:90034729 chr4:90034730 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_29491 0 0 0 0 0 Cytosol 0.438719516201282 0.438718599594113 0.37886048 0 hPsi_site_23215 iPseU_CNN:0.37886048;iRNA_PseU:0 23216 chr14 20216222 20216222 1 + C A LUAD 20216221 + 20216201 20216241 41 TCTGCTGTCTCTTGTCTGCTTCTTGGTCTTACTATTCTCTT TCTGCTGTCTCTTGTCTGCTTATTGGTCTTACTATTCTCTT < 41bp 0.528734752207975 0.850673246695397 0.22094584 0.3482116 prediction 0.643876988974844 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216221 chr14:20216222 nonsynonymous SNV 0.730 3 22 hPsi_associated_SNPs_29492 0 0 0 0 0 unknown 0.439965317694457 0.441084259958354 0 0 hPsi_site_23216 iPseU_CNN:0;iRNA_PseU:0 23217 chr1 234510085 234510085 1 + C A UCEC 234510084 + 234510064 234510104 41 GAGAACTTAGAGGATGCTTCTCAATGCAAGAAGTTAAGAAG GAGAACTTAGAGGATGCTTCTAAATGCAAGAAGTTAAGAAG < 41bp 0.467746275243162 0.821933264749633 0.19595438 0.26686925 prediction 0.643866529499265 Functional Gain - COA6 ENSG00000168275 CDS Human protein_coding chr1:234510084 chr1:234510085 nonsynonymous SNV 0.005 1 22 hPsi_associated_SNPs_29493 0 0 1 0 1 Cytosol 0.437052125032831 0.438576146053991 0 0 hPsi_site_23217 iPseU_CNN:0;iRNA_PseU:0 23218 chr15 77241555 77241555 1 + G A BLCA 77241554 + 77241534 77241574 41 GATGACTATTTCTATCATGATGAGCTTTAATCTCTGAGCCT GATGACTATTTCTATCATGATAAGCTTTAATCTCTGAGCCT < 41bp 0.429045281089487 0.821931782835515 0.31151083 0.6489247 prediction 0.643863565671029 Functional Gain - RCN2 ENSG00000117906 CDS Human protein_coding chr15:77241554 chr15:77241555 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_29494 0 0 1 0 0 Ribosome 0.438616332735148 0.438712114615654 0.2978494 0 hPsi_site_23218 iPseU_CNN:0.2978494;iRNA_PseU:0 23219 chr12 56495060 56495060 1 + G A UCEC 56495059 + 56495039 56495079 41 CCATTCCCAGCGCCACAGTCTGCTGACTCCTGTTACCCCAC CCATTCCCAGCGCCACAGTCTACTGACTCCTGTTACCCCAC < 41bp 0.400231954980743 0.821930301544024 0.2912535 0.63218856 prediction 0.643860603088049 Functional Gain - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56495059 chr12:56495060 synonymous SNV . 0 22 hPsi_associated_SNPs_29495 0 0 1 1 1 Cytosol 0.438718977655894 0.438717253755344 0.26437712 0 hPsi_site_23219 iPseU_CNN:0.26437712;iRNA_PseU:0 23220 chr10 99343359 99343359 1 + G T LIHC 99343358 + 99343338 99343378 41 AAAGACCCCGACGGACCTGGTGCAGCTCTGGCAGGCTGATA AAAGACCCCGACGGACCTGGTTCAGCTCTGGCAGGCTGATA < 41bp 0.495764785646512 0.821925788383032 0.47118306 0.7669634 prediction 0.643851576766063 Functional Gain - ANKRD2 ENSG00000165887 CDS Human protein_coding chr10:99343358 chr10:99343359 synonymous SNV . 0 22 hPsi_associated_SNPs_29496 0 0 0 0 1 exosome 0.438719980088533 0.43871860114195 0.5339268 0 hPsi_site_23220 iPseU_CNN:0.5339268;iRNA_PseU:0 23221 chr12 4835766 4835766 1 + G A LUAD 4835765 + 4835745 4835785 41 ACACTGAAGAGGGCGAAAGATGAAGTACGCCCTCTTCTAAA ACACTGAAGAGGGCGAAAGATAAAGTACGCCCTCTTCTAAA < 41bp 0.411109082717803 0.821924080183226 0.37020123 0.4870265 prediction 0.643848160366452 Functional Gain - GALNT8 ENSG00000130035 CDS Human protein_coding chr12:4835765 chr12:4835766 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_29497 0 0 0 0 1 cytosol 0.43872010488897 0.438718496889723 0 0 hPsi_site_23221 iPseU_CNN:0;iRNA_PseU:0 23222 chr4 1388379 1388379 1 + G A rs56109734 1388378 + 1388358 1388398 41 GTGGAGTGCCCGCCTGCTCATGTGCCCATGTGGAGTGCCCG GTGGAGTGCCCGCCTGCTCATATGCCCATGTGGAGTGCCCG < 41bp 0.559861431879292 0.881781604563861 0.26408303 0.33930695 prediction 0.643840345369138 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388378 chr4:1388379 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29498 0 0 1 0 0 chromatin 0.438719432492291 0.438718611534677 0 0 hPsi_site_23222 iPseU_CNN:0;iRNA_PseU:0 23223 chr1 248569430 248569430 1 + C A BLCA 248569429 + 248569409 248569449 41 TTGGAAGATATTACCTTATATCGGCACAACTGTAGGATCAA TTGGAAGATATTACCTTATATAGGCACAACTGTAGGATCAA < 41bp 0.508838849707773 0.83075335739208 0.18955094 0.32510996 prediction 0.643829015368615 Functional Gain - OR2T1 ENSG00000175143 CDS Human protein_coding chr1:248569429 chr1:248569430 synonymous SNV . 0 22 hPsi_associated_SNPs_29499 0 0 0 0 0 unknown 0.441000504898359 0.438712261951103 0 0 hPsi_site_23223 iPseU_CNN:0;iRNA_PseU:0 23224 chr20 37464670 37464670 1 + G A SKCM 37464669 + 37464649 37464689 41 GAAGCGCCGGGCCCAGCAGCTGAAGAAATGGGCACAGTACG GAAGCGCCGGGCCCAGCAGCTAAAGAAATGGGCACAGTACG < 41bp 0.401033097501262 0.821908864308937 0.28242046 0.62726134 prediction 0.643817728617875 Functional Gain - PPP1R16B ENSG00000101445 CDS Human protein_coding chr20:37464669 chr20:37464670 synonymous SNV . 0 22 hPsi_associated_SNPs_29500 0 0 0 0 0 Cytosol 0.438719276207643 0.438718280947196 0.25452268 0 hPsi_site_23224 iPseU_CNN:0.25452268;iRNA_PseU:0 23225 chr18 43252946 43252946 1 + C A GBM 43252945 + 43252925 43252965 41 GGAGGCATCTTCCTCATAGCTCTGTTCATATCCTCACCTCT GGAGGCATCTTCCTCATAGCTATGTTCATATCCTCACCTCT < 41bp 0.539018413754702 0.860918014465295 0.29883704 0.5947384 prediction 0.643799201421186 Functional Gain - SLC14A2 ENSG00000132874 CDS Human protein_coding chr18:43252945 chr18:43252946 nonsynonymous SNV 0.880 1 22 hPsi_associated_SNPs_29501 0 0 0 0 2 Nucleus 0.438722425344819 0.438718460342356 0.1894768 0 hPsi_site_23225 iPseU_CNN:0.1894768;iRNA_PseU:0 23226 chr6 33245847 33245847 1 + G A OV 33245846 + 33245826 33245866 41 GCAGGAAGGAGGCCAGGTTTTGCACAGCGAGGAAGTGCCTC GCAGGAAGGAGGCCAGGTTTTACACAGCGAGGAAGTGCCTC < 41bp 0.422348562804805 0.821897782409679 0.33230656 0.78686434 prediction 0.643795564819357 Functional Gain - B3GALT4 ENSG00000235863 CDS Human protein_coding chr6:33245846 chr6:33245847 synonymous SNV . 0 22 hPsi_associated_SNPs_29502 0 0 0 0 0 Ribosome 0.43871587684032 0.438699124917262 0.57372868 0 hPsi_site_23226 iPseU_CNN:0.57372868;iRNA_PseU:0 23227 chr19 58102004 58102004 1 + C A UCEC 58102003 + 58101983 58102023 41 GTGCAATGAATGTGGAAAATTCTTTAGCCAAACCTCCCACC GTGCAATGAATGTGGAAAATTATTTAGCCAAACCTCCCACC < 41bp 0.544397431612267 0.866293761283915 0.46834505 0.45879728 prediction 0.643792659343296 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58102003 chr19:58102004 nonsynonymous SNV 0.851 0 22 hPsi_associated_SNPs_29503 0 0 0 0 0 exosome 0.43871863205384 0.438718593123833 0 0 hPsi_site_23227 iPseU_CNN:0;iRNA_PseU:0 23228 chr16 1265056 1265056 1 + G A SKCM 1265055 + 1265035 1265075 41 GCACTGAAGCTGGTAGCATTTGGGTTCCGTCGGTTCTTCAA GCACTGAAGCTGGTAGCATTTAGGTTCCGTCGGTTCTTCAA < 41bp 0.578690036954442 0.900581574141407 0.62441015 0.787961 prediction 0.64378307437393 Functional Gain - CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1265055 chr16:1265056 nonsynonymous SNV 0.987 5 22 hPsi_associated_SNPs_29504 0 0 0 0 2 nucleolus 0.438681741815458 0.438314332334377 0.3271017 0 hPsi_site_23228 iPseU_CNN:0.3271017;iRNA_PseU:0 23229 chr5 94927239 94927239 1 + G A SKCM 94927238 + 94927218 94927258 41 ATGTACGAGGCTAGTGCACATGTTCCGCTTTTGATGATGGG ATGTACGAGGCTAGTGCACATATTCCGCTTTTGATGATGGG < 41bp 0.414395524840184 0.8218852663928 0.2999372 0.47827682 prediction 0.643770532785599 Functional Gain - ARSK ENSG00000164291 CDS Human protein_coding chr5:94927238 chr5:94927239 nonsynonymous SNV 0.008 1 22 hPsi_associated_SNPs_29505 0 0 1 3 1 Ribosome 0.43865370972193 0.438719512773077 0 0 hPsi_site_23229 iPseU_CNN:0;iRNA_PseU:0 23230 chr19 15167326 15167326 1 + C A rs7246853 15167325 + 15167305 15167345 41 TCCTGCATCTCACTTGGAGGTCAAACCTCCTCCTGAGGCCA TCCTGCATCTCACTTGGAGGTAAAACCTCCTCCTGAGGCCA < 41bp 0.512800992412102 0.834684109906983 0.70583844 0.8221358 prediction 0.643766234989761 Functional Gain - CASP14 ENSG00000105141 UTR3 Human protein_coding chr19:15167325 chr19:15167326 . . 0 22 hPsi_associated_SNPs_29506 0 0 0 0 0 exosome 0.438718783240503 0.438718598828499 0.23259472 0 hPsi_site_23230 iPseU_CNN:0.23259472;iRNA_PseU:0 23231 chr16 1364344 1364344 1 + G A CESC 1364343 + 1364323 1364363 41 CGATGGCACGATGAACCTCATGAACTGGGAGTGCGCCATTC CGATGGCACGATGAACCTCATAAACTGGGAGTGCGCCATTC < 41bp 0.395868472819573 0.821880404779931 0.18607903 0.27216464 prediction 0.643760809559862 Functional Gain - UBE2I ENSG00000103275 CDS Human protein_coding chr16:1364343 chr16:1364344 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_29507 0 0 1 0 1 Ribosome 0.440144211279286 0.438729251449454 0 0 hPsi_site_23231 iPseU_CNN:0;iRNA_PseU:0 23232 chr4 25678098 25678098 1 + G A SKCM 25678097 + 25678077 25678117 41 GCCGCTGTGGATGCGCTCGCTGAAGCCCTGGGATGCCGTCG GCCGCTGTGGATGCGCTCGCTAAAGCCCTGGGATGCCGTCG < 41bp 0.398597060041942 0.821875841408437 0.4811176 0.7652009 prediction 0.643751682816874 Functional Gain - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25678097 chr4:25678098 synonymous SNV . 0 22 hPsi_associated_SNPs_29508 0 0 0 0 0 nucleus 0.439280456618676 0.438693445183769 0.5304018 0 hPsi_site_23232 iPseU_CNN:0.5304018;iRNA_PseU:0 23233 chr7 64864086 64864086 1 + C A COAD 64864085 + 64864065 64864105 41 TGGCAAAGCCTTTAACCAGTTCTCAAACCTTACTAAACATA TGGCAAAGCCTTTAACCAGTTATCAAACCTTACTAAACATA < 41bp 0.511821287804532 0.83369454537414 0.37010074 0.5221534 prediction 0.643746515139217 Functional Gain - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64864085 chr7:64864086 nonsynonymous SNV 0.405 0 22 hPsi_associated_SNPs_29509 0 0 1 0 0 Cytosol 0.438719403540193 0.438753141813786 0.0443068 0 hPsi_site_23233 iPseU_CNN:0.0443068;iRNA_PseU:0 23234 chr20 11904128 11904128 1 + C A LUAD 11904127 + 11904107 11904147 41 GTTTGAATACCCAGTGCAGATCGAGCCAGACACCTTCTACA GTTTGAATACCCAGTGCAGATAGAGCCAGACACCTTCTACA < 41bp 0.532663440932883 0.854530747735106 0.2665203 0.36640233 prediction 0.643734613604445 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11904127 chr20:11904128 synonymous SNV . 0 22 hPsi_associated_SNPs_29510 0 0 1 0 0 Cytosol 0.43870543827029 0.440781474621276 0 0 hPsi_site_23234 iPseU_CNN:0;iRNA_PseU:0 23235 chr2 242690771 242690771 1 + G A LUSC 242690770 + 242690750 242690790 41 GGCTCCGGCCTGGTGACCGATGGGACCATGGCCACCGACCA GGCTCCGGCCTGGTGACCGATAGGACCATGGCCACCGACCA < 41bp 0.583025702269396 0.904891081132179 0.2352139 0.27654892 prediction 0.643730757725565 Functional Gain - D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242690770 chr2:242690771 nonsynonymous SNV 0.115 5 22 hPsi_associated_SNPs_29511 0 0 1 0 1 Ribosome 0.438640780757401 0.438796473353518 0 0 hPsi_site_23235 iPseU_CNN:0;iRNA_PseU:0 23236 chr6 155577872 155577872 1 + C T rs114433866 155577873 - 155577853 155577893 41 CCTGCTTCACAGTCTGACGGTGGTCATCATCTTCATCGCTC CCTGCTTCACAGTCTGACGGTAGTCATCATCTTCATCGCTC < 41bp 0.441556727310305 0.821864576169491 0.18680471 0.65881515 prediction 0.643729152338982 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577873 chr6:155577872 nonsynonymous SNV 0.739 0 22 hPsi_associated_SNPs_29512 0 0 1 0 0 Cytosol 0.438714457102106 0.438717656089713 0.3176303 0 hPsi_site_23236 iPseU_CNN:0.3176303;iRNA_PseU:0 23237 chrX 130220305 130220305 1 + G T LUSC 130220304 + 130220284 130220324 41 TTGCTAATTCTACCCTCAGGTGCCTCCCCATATTCAGAGGC TTGCTAATTCTACCCTCAGGTTCCTCCCCATATTCAGAGGC < 41bp 0.498446808322996 0.821861827106302 0.19854316 0.26073825 prediction 0.643723654212604 Functional Gain - ARHGAP36 ENSG00000147256 CDS Human protein_coding chrX:130220304 chrX:130220305 synonymous SNV . 0 22 hPsi_associated_SNPs_29513 0 0 0 0 2 unknown 0.438719420598003 0.438720156048308 0 0 hPsi_site_23237 iPseU_CNN:0;iRNA_PseU:0 23238 chr2 85824246 85824246 1 + G A GBM 85824245 + 85824225 85824265 41 AGACAAATTCCTGTCCCTTGTGCCGCTATGAGCTGCCCACT AGACAAATTCCTGTCCCTTGTACCGCTATGAGCTGCCCACT < 41bp 0.585787273466827 0.907643968122768 0.23302755 0.3216334 prediction 0.643713389311882 Functional Gain - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85824245 chr2:85824246 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29514 0 0 1 0 2 Ribosome 0.438718689287877 0.438715999296518 0 0 hPsi_site_23238 iPseU_CNN:0;iRNA_PseU:0 23239 chr22 51010463 51010463 1 + G A COAD 51010462 + 51010442 51010482 41 GGAATGTCCCACTGCAGCCGTGTAGGAGGTGCGAGCGCAGG GGAATGTCCCACTGCAGCCGTATAGGAGGTGCGAGCGCAGG < 41bp 0.574387502493603 0.896239467912347 0.39159647 0.57340705 prediction 0.643703930837488 Functional Gain - CPT1B ENSG00000205560 CDS Human protein_coding chr22:51010462 chr22:51010463 nonsynonymous SNV 0.054 0 22 hPsi_associated_SNPs_29515 0 0 0 0 0 nucleolus 0.440912106985683 0.439559798176076 0.1468141 0 hPsi_site_23239 iPseU_CNN:0.1468141;iRNA_PseU:0 23240 chr1 235611997 235611997 1 + G T COAD 235611998 - 235611978 235612018 41 GGTCATTTTCCAGCTCGATTTCTCTGCCCGGCTTCTAAAAT GGTCATTTTCCAGCTCGATTTATCTGCCCGGCTTCTAAAAT < 41bp 0.520388359909381 0.842238870791917 0.3614205 0.6926202 prediction 0.643701021765072 Functional Gain - TBCE ENSG00000116957 CDS Human protein_coding chr1:235611998 chr1:235611997 stopgain 0.019 1 22 hPsi_associated_SNPs_29516 0 0 1 0 0 chromatin 0.438718592920839 0.43871859287904 0.3852404 0 hPsi_site_23240 iPseU_CNN:0.3852404;iRNA_PseU:0 23241 chr11 68181258 68181258 1 + G A BRCA 68181257 + 68181237 68181277 41 GACTGGAATCTGCACAGCATTGAGCGGGCCGACAAGACTAG GACTGGAATCTGCACAGCATTAAGCGGGCCGACAAGACTAG < 41bp 0.415541289628667 0.821845383870191 0.2353437 0.30118325 prediction 0.643690767740382 Functional Gain - LRP5 ENSG00000162337 CDS Human protein_coding chr11:68181257 chr11:68181258 nonsynonymous SNV 0.961 4 22 hPsi_associated_SNPs_29517 0 0 1 0 0 Endoplasmic reticulum 0.438718585264568 0.438708188650891 0 0 hPsi_site_23241 iPseU_CNN:0;iRNA_PseU:0 23242 chrX 153034510 153034510 1 + C A UCEC 153034509 + 153034489 153034529 41 GGACAGCAGTGGCAGTCACCTCTATGTCCTGACTGCCCACC GGACAGCAGTGGCAGTCACCTATATGTCCTGACTGCCCACC < 41bp 0.541455600575555 0.863299108986349 0.2726916 0.42248213 prediction 0.643687016821588 Functional Gain - PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153034509 chrX:153034510 synonymous SNV . 0 22 hPsi_associated_SNPs_29518 0 0 0 0 1 Endoplasmic reticulum 0.438717190017581 0.438746944132097 0 0 hPsi_site_23242 iPseU_CNN:0;iRNA_PseU:0 23243 chr7 142961658 142961658 1 + C A GBM 142961657 + 142961637 142961677 41 GCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAAGGACT GCAGGAAACAAGCCTCCAGGTATGCTTCCCCGCAAAGGACT < 41bp 0.548428851686465 0.870271126032496 0.3129354 0.5642854 prediction 0.643684548692063 Functional Gain - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142961657 chr7:142961658 nonsynonymous SNV 0.018 0 22 hPsi_associated_SNPs_29519 0 0 1 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592995125 0.1285708 0 hPsi_site_23243 iPseU_CNN:0.1285708;iRNA_PseU:0 23244 chr1 53347174 53347174 1 + C A UCEC 53347173 + 53347153 53347193 41 CAGAAGTCAGAGAGCTCTCTTCCAAGCTGGTGACCGAAGAT CAGAAGTCAGAGAGCTCTCTTACAAGCTGGTGACCGAAGAT < 41bp 0.45869942258615 0.821842263222503 0.41167402 0.3486313 prediction 0.643684526445006 Functional Gain - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53347173 chr1:53347174 nonsynonymous SNV 0.970 0 22 hPsi_associated_SNPs_29520 0 0 1 0 1 chromatin 0.43871864001625 0.438720381249695 0 0 hPsi_site_23244 iPseU_CNN:0;iRNA_PseU:0 23245 chr17 16220036 16220036 1 + G A rs138410893 16220035 + 16220015 16220055 41 AGTTACCTAAAGGTAAGGCTTGTTCCTTTTGCAAAGGGCCA AGTTACCTAAAGGTAAGGCTTATTCCTTTTGCAAAGGGCCA < 41bp 0.570896801880373 0.892736796803667 0.5946967 0.7377775 prediction 0.643679989846587 Functional Gain - PIGL ENSG00000108474 CDS Human protein_coding chr17:16220035 chr17:16220036 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_29521 2 0 1 0 1 chromatin 0.438718583441157 0.438718607670109 0.2861616 0 hPsi_site_23245 iPseU_CNN:0.2861616;iRNA_PseU:0 23246 chr8 143763364 143763364 1 + C T rs182010420 143763365 - 143763345 143763385 41 GTTCAAGCTGCAGCCTTTGCTGATGACGGTCAGGAGGCCAA GTTCAAGCTGCAGCCTTTGCTAATGACGGTCAGGAGGCCAA < 41bp 0.432605270735012 0.821839808045649 0.2231687 0.28125748 prediction 0.643679616091299 Functional Gain - PSCA ENSG00000167653 CDS Human protein_coding chr8:143763365 chr8:143763364 synonymous SNV . 0 22 hPsi_associated_SNPs_29522 0 0 0 0 0 exosome 0.438718738128696 0.43871867967559 0 0 hPsi_site_23246 iPseU_CNN:0;iRNA_PseU:0 23247 chr19 19654744 19654744 1 + G A COAD 19654743 + 19654723 19654763 41 GTGAAGGTGGTGGCAGAGTGTGGCTGCCAGAAGTGTCTGCC GTGAAGGTGGTGGCAGAGTGTAGCTGCCAGAAGTGTCTGCC < 41bp 0.405902782672718 0.821838291530853 0.2624988 0.64169 prediction 0.643676583061705 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19654743 chr19:19654744 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_29523 0 0 0 0 0 exosome 0.440992369916008 0.438703375794581 0.28338 0 hPsi_site_23247 iPseU_CNN:0.28338;iRNA_PseU:0 23248 chr19 41704736 41704736 1 + G A BLCA 41704735 + 41704715 41704755 41 GCAGCAGCACCAGGGGAACCTGGATGCTTCGGGCCCCGCAC GCAGCAGCACCAGGGGAACCTAGATGCTTCGGGCCCCGCAC < 41bp 0.583350367628713 0.905185732543113 0.28575915 0.33426356 prediction 0.6436707298288 Functional Gain - CYP2S1 ENSG00000167600 CDS Human protein_coding chr19:41704735 chr19:41704736 synonymous SNV . 0 22 hPsi_associated_SNPs_29524 0 0 0 0 1 Ribosome 0.438718508000186 0.438718716982021 0 0 hPsi_site_23248 iPseU_CNN:0;iRNA_PseU:0 23249 chr4 175225429 175225429 1 + C A UCEC 175225428 + 175225408 175225448 41 AACAAAGAAAGAAAATCAGTTCTGGTAAGTCAGAACCTCCT AACAAAGAAAGAAAATCAGTTATGGTAAGTCAGAACCTCCT < 41bp 0.528874655392402 0.850705698500404 0.2613079 0.35037902 prediction 0.643662086216004 Functional Gain - CEP44 ENSG00000164118 CDS Human protein_coding chr4:175225428 chr4:175225429 nonsynonymous SNV 0.161 0 22 hPsi_associated_SNPs_29525 0 0 1 0 2 Nucleus 0.43871859300319 0.438718592993821 0 0 hPsi_site_23249 iPseU_CNN:0;iRNA_PseU:0 23250 chr10 105202123 105202123 1 + C A UCEC 105202122 + 105202102 105202142 41 AGCTCCCCCAACAGCTCCATTCTGTGGCTGCAGTACATGGC AGCTCCCCCAACAGCTCCATTATGTGGCTGCAGTACATGGC < 41bp 0.55375651767337 0.875581361738519 0.21828833 0.46182796 prediction 0.643649688130298 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105202122 chr10:105202123 nonsynonymous SNV 0.927 4 22 hPsi_associated_SNPs_29526 0 0 1 0 1 Nucleus 0.438724295368319 0.438705880166588 0 0 hPsi_site_23250 iPseU_CNN:0;iRNA_PseU:0 23251 chr11 6891690 6891690 1 + C A UCEC 6891689 + 6891669 6891709 41 TTCCTCACACCTCCTTGTTGTCTCTCTTTTCTATATATCAT TTCCTCACACCTCCTTGTTGTATCTCTTTTCTATATATCAT < 41bp 0.475420330467669 0.821820351238655 0.2715912 0.38117146 prediction 0.64364070247731 Functional Gain - OR10A2 ENSG00000170790 CDS Human protein_coding chr11:6891689 chr11:6891690 synonymous SNV . 0 22 hPsi_associated_SNPs_29527 0 0 0 0 0 unknown 0.438718592277777 0.438718542223912 0 0 hPsi_site_23251 iPseU_CNN:0;iRNA_PseU:0 23252 chr17 39411792 39411792 1 + G A rs546914908 39411791 + 39411771 39411811 41 CTTGCTGCCGCCCAGCTTGCTGTCAAAACACCTGCTGCAGG CTTGCTGCCGCCCAGCTTGCTATCAAAACACCTGCTGCAGG < 41bp 0.417777043954031 0.821817021589406 0.2658464 0.5884984 prediction 0.643634043178811 Functional Gain - KRTAP9-9 ENSG00000198083 CDS Human protein_coding chr17:39411791 chr17:39411792 nonsynonymous SNV 0.032 0 22 hPsi_associated_SNPs_29528 0 0 0 0 0 unknown 0.438223859297044 0.438693009690755 0.1769968 0 hPsi_site_23252 iPseU_CNN:0.1769968;iRNA_PseU:0 23253 chr5 167868809 167868809 1 + C A rs3733980 167868808 + 167868788 167868828 41 GGAGCTCAAGCCAGTGGGAGTCATGGCCCCTGCCTCAGGGC GGAGCTCAAGCCAGTGGGAGTAATGGCCCCTGCCTCAGGGC < 41bp 0.442141694762499 0.821809469151619 0.247233 0.40034997 prediction 0.643618938303239 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167868808 chr5:167868809 synonymous SNV . 0 22 hPsi_associated_SNPs_29529 0 0 0 0 2 Ribosome 0.438718592995096 0.438718592442991 0 0 hPsi_site_23253 iPseU_CNN:0;iRNA_PseU:0 23254 chr13 48615174 48615174 1 + G A rs529126695 48615173 + 48615153 48615193 41 GAGAAGGAGAATTACCATTATGTTACTATATTAATGAAAGG GAGAAGGAGAATTACCATTATATTACTATATTAATGAAAGG < 41bp 0.41539030710153 0.821794159151189 0.14753494 0.123338014 prediction 0.643588318302378 Functional Gain - NUDT15 ENSG00000136159 CDS Human protein_coding chr13:48615173 chr13:48615174 nonsynonymous SNV 0.995 1 22 hPsi_associated_SNPs_29530 0 0 1 0 1 Ribosome 0.438718672072856 0.438718589508641 0 0 hPsi_site_23254 iPseU_CNN:0;iRNA_PseU:0 23255 chr6 155153402 155153402 1 + C A ESCA 155153401 + 155153381 155153421 41 GTTCCAAATACTCCTGGACTTCTGGGAACACAGCCACCAGC GTTCCAAATACTCCTGGACTTATGGGAACACAGCCACCAGC < 41bp 0.542287325675924 0.86407771581119 0.26130438 0.26942176 prediction 0.643580780270531 Functional Gain - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155153401 chr6:155153402 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_29531 0 0 1 0 0 Nucleus 0.43891649936787 0.438725298882544 0 0 hPsi_site_23255 iPseU_CNN:0;iRNA_PseU:0 23256 chrX 55757864 55757864 1 + C A UCEC 55757863 + 55757843 55757883 41 ATCTTCCGAAATGTGGAGGTTCTGATTTATGTCTTTGATGT ATCTTCCGAAATGTGGAGGTTATGATTTATGTCTTTGATGT < 41bp 0.540182140486937 0.861966865693253 0.30523068 0.33517912 prediction 0.643569450412632 Functional Gain - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55757863 chrX:55757864 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29532 0 0 1 0 1 Cytosol 0.438718272035036 0.438710504406319 0 0 hPsi_site_23256 iPseU_CNN:0;iRNA_PseU:0 23257 chr1 247769028 247769028 1 + C A COAD 247769027 + 247769007 247769047 41 GGGAAACTTCACCATAATCATCATCTCATATCTGGATCCCC GGGAAACTTCACCATAATCATAATCTCATATCTGGATCCCC < 41bp 0.486239256673079 0.821783312957053 0.24004778 0.3636219 prediction 0.643566625914106 Functional Gain - OR2G3 ENSG00000177476 CDS Human protein_coding chr1:247769027 chr1:247769028 synonymous SNV . 0 22 hPsi_associated_SNPs_29533 0 0 0 0 0 unknown 0.438718585150854 0.43871859299112 0 0 hPsi_site_23257 iPseU_CNN:0;iRNA_PseU:0 23258 chr15 28929417 28929417 1 + C A COAD 28929416 + 28929396 28929436 41 GACTCTGTTGTTGTGGAAATTCAATTTGTTCATTGTGTTTT GACTCTGTTGTTGTGGAAATTAAATTTGTTCATTGTGTTTT < 41bp 0.488785246023798 0.821774385673469 0.2234604 0.27019882 prediction 0.643548771346938 Functional Gain - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28929416 chr15:28929417 . . 0 22 hPsi_associated_SNPs_29534 0 0 0 0 0 unknown 0.438736076953369 0.438721116399015 0 0 hPsi_site_23258 iPseU_CNN:0;iRNA_PseU:0 23259 chr10 51768705 51768705 1 + G A LAML 51768704 + 51768684 51768724 41 AAAGCCCCGGAGAATCATGCTGACACCATCGGGAGCGGTAG AAAGCCCCGGAGAATCATGCTAACACCATCGGGAGCGGTAG < 41bp 0.581733750380714 0.903504382861647 0.27609056 0.35885698 prediction 0.643541264961865 Functional Gain - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51768704 chr10:51768705 nonsynonymous SNV 0.067 0 22 hPsi_associated_SNPs_29535 0 0 1 0 0 chromatin 0.438718592713064 0.438718592997928 0 0 hPsi_site_23259 iPseU_CNN:0;iRNA_PseU:0 23260 chr1 9323690 9323690 1 + G A BLCA 9323689 + 9323669 9323709 41 TTCAAGAACCAGGCCTGCTGTGTGCAGAGCGAAAAGCACTG TTCAAGAACCAGGCCTGCTGTATGCAGAGCGAAAAGCACTG < 41bp 0.4170125985273 0.821767571754655 0.27520144 0.38573712 prediction 0.64353514350931 Functional Gain - H6PD ENSG00000049239 CDS Human protein_coding chr1:9323689 chr1:9323690 nonsynonymous SNV 0.045 1 22 hPsi_associated_SNPs_29536 0 0 0 0 0 Ribosome 0.447042475052186 0.44031136954089 0 0 hPsi_site_23260 iPseU_CNN:0;iRNA_PseU:0 23261 chr4 951642 951642 1 + G T CESC 951641 + 951621 951661 41 CGTCCCGGACCCCAAGGATGTGAAGGAGAGGTTCAGCGGCA CGTCCCGGACCCCAAGGATGTTAAGGAGAGGTTCAGCGGCA < 41bp 0.498341091550223 0.821765829920525 0.20513672 0.27998155 prediction 0.643531659841051 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:951641 chr4:951642 synonymous SNV . 0 22 hPsi_associated_SNPs_29537 0 0 0 0 1 chromatin 0.438718532697825 0.438718591345025 0 0 hPsi_site_23261 iPseU_CNN:0;iRNA_PseU:0 23262 chr1 67243083 67243083 1 + C A UCEC 67243082 + 67243062 67243102 41 TACCTTTTCATCTTATGTTTTCAGAAATTCTTCTCTCTTCG TACCTTTTCATCTTATGTTTTAAGAAATTCTTCTCTCTTCG < 41bp 0.481908999510877 0.821765224775706 0.4024318 0.363747 prediction 0.643530449551412 Functional Gain - TCTEX1D1 ENSG00000152760 CDS Human protein_coding chr1:67243082 chr1:67243083 nonsynonymous SNV 0.940 2 22 hPsi_associated_SNPs_29538 0 0 0 0 0 exosome 0.438719079630285 0.438718613492638 0 0 hPsi_site_23262 iPseU_CNN:0;iRNA_PseU:0 23263 chr1 111861822 111861822 1 + G A rs17027410 111861821 + 111861801 111861841 41 TTATGCCTATCAGGGCAATGTGTGGGTTGGCTATGACAACA TTATGCCTATCAGGGCAATGTATGGGTTGGCTATGACAACA < 41bp 0.41079258500707 0.821760547212173 0.3746572 0.6305368 prediction 0.643521094424345 Functional Gain - CHIA ENSG00000134216 CDS Human protein_coding chr1:111861821 chr1:111861822 synonymous SNV . 0 22 hPsi_associated_SNPs_29539 0 0 0 0 2 exosome 0.439465099811792 0.438767113611425 0.2610736 0 hPsi_site_23263 iPseU_CNN:0.2610736;iRNA_PseU:0 23264 chr1 162737080 162737080 1 + C A rs143928882 162737079 + 162737059 162737099 41 GATTGGCTGCTTGGTGGCCATCATCTTTATCCTCCTGGCCA GATTGGCTGCTTGGTGGCCATAATCTTTATCCTCCTGGCCA < 41bp 0.455954669779646 0.82175639766656 0.16611543 0.5707564 prediction 0.643512795333121 Functional Gain - DDR2 ENSG00000162733 CDS Human protein_coding chr1:162737079 chr1:162737080 synonymous SNV . 0 22 hPsi_associated_SNPs_29540 0 1 0 0 2 nucleolus 0.438731626212547 0.4387056941882 0.1415128 0 hPsi_site_23264 iPseU_CNN:0.1415128;iRNA_PseU:0 23265 chr1 4832501 4832501 1 + G A SKCM 4832500 + 4832480 4832520 41 CCCTGCAGTGTTCTCACGAGTGCGTCAGGGCATCTGTGCCC CCCTGCAGTGTTCTCACGAGTACGTCAGGGCATCTGTGCCC < 41bp 0.396818633944064 0.821754829857428 0.34642258 0.79011387 prediction 0.643509659714856 Functional Gain - AJAP1 ENSG00000196581 CDS Human protein_coding chr1:4832500 chr1:4832501 nonsynonymous SNV 0.879 4 22 hPsi_associated_SNPs_29541 0 0 0 0 1 exosome 0.438690392748996 0.438440496395179 0.58022774 0 hPsi_site_23265 iPseU_CNN:0.58022774;iRNA_PseU:0 23266 chr11 55659022 55659022 1 + G A LIHC 55659021 + 55659001 55659041 41 AGAACCGTGAGCTTTGTTGATGTTGATCAAAGTTCCCTGAT AGAACCGTGAGCTTTGTTGATATTGATCAAAGTTCCCTGAT < 41bp 0.576074939537887 0.897820396587666 0.3075757 0.40587834 prediction 0.643490914099558 Functional Gain - TRIM51 ENSG00000124900 CDS Human protein_coding chr11:55659021 chr11:55659022 nonsynonymous SNV 0.001 3 22 hPsi_associated_SNPs_29542 0 0 0 0 0 unknown 0.438715116253754 0.438718570602033 0 0 hPsi_site_23266 iPseU_CNN:0;iRNA_PseU:0 23267 chr7 143807425 143807425 1 + C A UCEC 143807424 + 143807404 143807444 41 CCTGTGTGTGGTTGGACTATTCTTTGGCATAGCCATGGTGG CCTGTGTGTGGTTGGACTATTATTTGGCATAGCCATGGTGG < 41bp 0.527507924682571 0.849252782328863 0.21761984 0.38908863 prediction 0.643489715292584 Functional Gain - OR2A2 ENSG00000221989 CDS Human protein_coding chr7:143807424 chr7:143807425 nonsynonymous SNV 0.892 1 22 hPsi_associated_SNPs_29543 0 0 0 0 0 unknown 0.439340598803345 0.438719778930561 0 0 hPsi_site_23267 iPseU_CNN:0;iRNA_PseU:0 23268 chr14 20585936 20585936 1 + C A COAD 20585935 + 20585915 20585955 41 TAAAAAAGCAGAAGGTAATTTCTTTTGCTGGGTGCTTCACT TAAAAAAGCAGAAGGTAATTTATTTTGCTGGGTGCTTCACT < 41bp 0.485435102687559 0.821741094936914 0.2540853 0.4692415 prediction 0.643482189873828 Functional Gain - OR4K17 ENSG00000176230 CDS Human protein_coding chr14:20585935 chr14:20585936 nonsynonymous SNV 0.664 3 22 hPsi_associated_SNPs_29544 0 0 0 0 0 unknown 0.438803085654445 0.438738473546629 0 0 hPsi_site_23268 iPseU_CNN:0;iRNA_PseU:0 23269 chr2 27438235 27438235 1 + C A UCEC 27438234 + 27438214 27438254 41 GAGGACCCTGGTCCAAACTTTCATCAGGCACATACCACTGT GAGGACCCTGGTCCAAACTTTAATCAGGCACATACCACTGT < 41bp 0.561335683118722 0.883073042454431 0.6788625 0.80620235 prediction 0.643474718671419 Functional Gain - ATRAID ENSG00000138085 CDS Human protein_coding chr2:27438234 chr2:27438235 nonsynonymous SNV 0.508 0 22 hPsi_associated_SNPs_29545 0 0 1 0 2 Endoplasmic reticulum 0.43871843450211 0.438718374258903 0.2546797 0 hPsi_site_23269 iPseU_CNN:0.2546797;iRNA_PseU:0 23270 chr11 113270858 113270858 1 + G A SKCM 113270857 + 113270837 113270877 41 GCCCAGCTGGACGTCCAGGATGGAGTGAGCTGCACACCCCT GCCCAGCTGGACGTCCAGGATAGAGTGAGCTGCACACCCCT < 41bp 0.573414921662834 0.895147833170818 0.27774933 0.58203006 prediction 0.643465823015969 Functional Gain - ANKK1 ENSG00000170209 CDS Human protein_coding chr11:113270857 chr11:113270858 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29546 0 0 0 0 0 exosome 0.438718553810063 0.438839242365712 0.16406012 0 hPsi_site_23270 iPseU_CNN:0.16406012;iRNA_PseU:0 23271 chr10 85912074 85912074 1 + G A COAD 85912073 + 85912053 85912093 41 ATTTATGCGAGTTGCAACTATGCTGGCAACTGGAGGCAACA ATTTATGCGAGTTGCAACTATACTGGCAACTGGAGGCAACA < 41bp 0.430654871859206 0.821728912910006 0.14650935 0.20964652 prediction 0.643457825820012 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85912073 chr10:85912074 nonsynonymous SNV 0.997 0 22 hPsi_associated_SNPs_29547 0 0 1 0 1 Ribosome 0.438430923636959 0.439156770350127 0 0 hPsi_site_23271 iPseU_CNN:0;iRNA_PseU:0 23272 chr14 64990186 64990186 1 + C A UCEC 64990185 + 64990165 64990205 41 ACCATGTACGGCATATGATTTCTCATTTATCTGCTGGTGAG ACCATGTACGGCATATGATTTATCATTTATCTGCTGGTGAG < 41bp 0.514885207176547 0.836611249311869 0.27271864 0.2482332 prediction 0.643452084270644 Functional Gain - ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990185 chr14:64990186 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29548 0 0 1 0 0 Cytosol 0.438719403995878 0.438193303375563 0 0 hPsi_site_23272 iPseU_CNN:0;iRNA_PseU:0 23273 chr1 149376794 149376794 1 + C A UCEC 149376793 + 149376773 149376813 41 GCCTGGTTTGCAGCTTTACTTCTCCTTCTACATGGGCAGCA GCCTGGTTTGCAGCTTTACTTATCCTTCTACATGGGCAGCA < 41bp 0.486128200717071 0.821725637124671 0.280574 0.32541347 prediction 0.643451274249342 Functional Gain - FCGR1CP ENSG00000253193 ncRNA_exonic Human other chr1:149376793 chr1:149376794 . . 0 22 hPsi_associated_SNPs_29549 0 0 0 0 0 unknown 0.438718992981574 0.438718594687192 0 0 hPsi_site_23273 iPseU_CNN:0;iRNA_PseU:0 23274 chr10 8006159 8006159 1 + C A UCEC 8006158 + 8006138 8006178 41 AAAAGATCCCACCAATGCTTTCTCCAGTCCATGTACAGGAC AAAAGATCCCACCAATGCTTTATCCAGTCCATGTACAGGAC < 41bp 0.548649094186597 0.870371058539249 0.35135856 0.3820263 prediction 0.643443928705302 Functional Gain - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8006158 chr10:8006159 nonsynonymous SNV 0.140 4 22 hPsi_associated_SNPs_29550 0 0 0 0 0 Cytosol 0.438718769392811 0.438718578647433 0 0 hPsi_site_23274 iPseU_CNN:0;iRNA_PseU:0 23275 chr15 25455076 25455076 1 + G A BLCA 25455075 + 25455055 25455095 41 GCACTGGGTTGGGTCAATGATGAGAACCTTATATTGTCCTG GCACTGGGTTGGGTCAATGATAAGAACCTTATATTGTCCTG < 41bp 0.474078193403321 0.821719753849179 0.29751146 0.3117615 prediction 0.643439507698357 Functional Gain - SNORD115-22 ENSG00000201326 ncRNA_exonic Human snoRNA chr15:25455075 chr15:25455076 . . 0 22 hPsi_associated_SNPs_29551 0 0 0 0 0 unknown 0.438704868491671 0.438748964910966 0 0 hPsi_site_23275 iPseU_CNN:0;iRNA_PseU:0 23276 chr19 7083624 7083624 1 + C A UCEC 7083623 + 7083603 7083643 41 TGTGGAAAATCCTTTAATGTTCTCTCATCCGTTAAGAAACA TGTGGAAAATCCTTTAATGTTATCTCATCCGTTAAGAAACA < 41bp 0.532746702149571 0.854463235697631 0.74403644 0.8068522 prediction 0.643433067096121 Functional Gain - ZNF557 ENSG00000130544 CDS Human protein_coding chr19:7083623 chr19:7083624 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29552 0 0 0 0 0 Cytosol 0.438718739024668 0.438707868469826 0.12563152 0 hPsi_site_23276 iPseU_CNN:0.12563152;iRNA_PseU:0 23277 chr2 113742458 113742458 1 + G A SKCM 113742457 + 113742437 113742477 41 GTATGGCCAACCCGAGCCCGTGAAACCCTTCCTTTTCTACC GTATGGCCAACCCGAGCCCGTAAAACCCTTCCTTTTCTACC < 41bp 0.57311044901532 0.894825196882403 0.43518037 0.63061905 prediction 0.643429495734166 Functional Gain - IL36G ENSG00000136688 CDS Human protein_coding chr2:113742457 chr2:113742458 synonymous SNV . 0 22 hPsi_associated_SNPs_29553 0 0 0 0 1 exosome 0.438718592995926 0.438718592995102 0.2612381 0 hPsi_site_23277 iPseU_CNN:0.2612381;iRNA_PseU:0 23278 chr7 150732748 150732748 1 + G T LUSC 150732747 + 150732727 150732767 41 ACGCCTCACGCTGCTGCTGATGGTGGCCACACCAGCCCTGA ACGCCTCACGCTGCTGCTGATTGTGGCCACACCAGCCCTGA < 41bp 0.517640568480901 0.839353613987786 0.18674344 0.35729992 prediction 0.64342609101377 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150732747 chr7:150732748 nonsynonymous SNV 0.627 1 22 hPsi_associated_SNPs_29554 0 0 1 0 2 Ribosome 0.438726418248501 0.438537613728276 0 0 hPsi_site_23278 iPseU_CNN:0;iRNA_PseU:0 23279 chr16 633774 633774 1 + G A rs140193814 633773 + 633753 633793 41 GCAGGTCCTGCGGCCAAATCTGTCTCCCTTCATGGGCCTCC GCAGGTCCTGCGGCCAAATCTATCTCCCTTCATGGGCCTCC < 41bp 0.468142428911902 0.821711108119804 0.308419 0.39644408 prediction 0.643422216239608 Functional Gain - PIGQ ENSG00000007541 UTR3 Human protein_coding chr16:633773 chr16:633774 . . 0 22 hPsi_associated_SNPs_29555 0 0 1 0 0 Ribosome 0.438720008289531 0.43871923180456 0 0 hPsi_site_23279 iPseU_CNN:0;iRNA_PseU:0 23280 chr19 57133214 57133214 1 + G T STAD 57133213 + 57133193 57133233 41 CACACGGGCGAGAAGCCCTATGCCTGCGGGGACTGCGGCAA CACACGGGCGAGAAGCCCTATTCCTGCGGGGACTGCGGCAA < 41bp 0.500654821667861 0.822361309532644 0.32227272 0.45177665 prediction 0.643412975729565 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133213 chr19:57133214 nonsynonymous SNV 0.047 0 22 hPsi_associated_SNPs_29556 0 0 0 0 0 exosome 0.438718583197429 0.438718593489925 0 0 hPsi_site_23280 iPseU_CNN:0;iRNA_PseU:0 23281 chr1 192548339 192548339 1 + G T UCEC 192548338 + 192548318 192548358 41 CCAACCCCCACGTGTTTTGATGAAGCACAAAAAGTCATATA CCAACCCCCACGTGTTTTGATTAAGCACAAAAAGTCATATA < 41bp 0.500734803556173 0.822440820964724 0.27433252 0.383972 prediction 0.643412034817104 Functional Gain - RGS1 ENSG00000090104 CDS Human protein_coding chr1:192548338 chr1:192548339 stopgain 0.990 1 22 hPsi_associated_SNPs_29557 0 0 0 0 1 exosome 0.438718624335504 0.438721304307966 0 0 hPsi_site_23281 iPseU_CNN:0;iRNA_PseU:0 23282 chr19 48257810 48257810 1 + G A UCEC 48257809 + 48257789 48257829 41 GCTCTCAGCGGCCCACGAGGTGGAGTTGCAGCGGCAGAAGG GCTCTCAGCGGCCCACGAGGTAGAGTTGCAGCGGCAGAAGG < 41bp 0.393470997519103 0.821703968492798 0.31046402 0.6784277 prediction 0.643407936985595 Functional Gain - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48257809 chr19:48257810 synonymous SNV . 0 22 hPsi_associated_SNPs_29558 0 0 1 0 2 unknown 0.43871799473413 0.43848246652687 0.3568554 0 hPsi_site_23282 iPseU_CNN:0.3568554;iRNA_PseU:0 23283 chr13 113976786 113976786 1 + G A rs559714284 113976785 + 113976765 113976805 41 GGGGCCTCTGTTCCTTTCTCTGGGCTTAGGGTCCTGTCGAA GGGGCCTCTGTTCCTTTCTCTAGGCTTAGGGTCCTGTCGAA < 41bp 0.42586145834934 0.821698394015569 0.36712453 0.53349936 prediction 0.643396788031138 Functional Gain - LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113976785 chr13:113976786 . . 0 22 hPsi_associated_SNPs_29559 0 0 1 0 0 Cytosol 0.438718592993522 0.438718592978107 0.06699872 0 hPsi_site_23283 iPseU_CNN:0.06699872;iRNA_PseU:0 23284 chr14 20823075 20823075 1 + G T SKCM 20823074 + 20823054 20823094 41 GCTCTCATGGAAGCATGCAATGAATTCTACACCAGGATTCC GCTCTCATGGAAGCATGCAATTAATTCTACACCAGGATTCC < 41bp 0.476860691058178 0.821697111173144 0.26588023 0.31996447 prediction 0.643394222346289 Functional Gain - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20823074 chr14:20823075 stopgain 1.000 1 22 hPsi_associated_SNPs_29560 0 0 1 0 1 Cytosol 0.438714289377199 0.43871859452885 0 0 hPsi_site_23284 iPseU_CNN:0;iRNA_PseU:0 23285 chr17 73269580 73269580 1 + G T UCEC 73269581 - 73269561 73269601 41 CATGTTCTTCTCGTATGAATTCTTCTGTAATGTCTTCCACT CATGTTCTTCTCGTATGAATTATTCTGTAATGTCTTCCACT < 41bp 0.529588146774014 0.851280989130727 0.42786855 0.5100601 prediction 0.643385684713426 Functional Gain - SLC25A19 ENSG00000125454 CDS Human protein_coding chr17:73269581 chr17:73269580 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_29561 0 0 1 0 0 Ribosome 0.438527946963128 0.442761809381487 0.0201202 0 hPsi_site_23285 iPseU_CNN:0.0201202;iRNA_PseU:0 23286 chr10 47087866 47087866 1 + C A HNSC 47087865 + 47087845 47087885 41 GTCCACAGTACATACGGAAGTCTCCAAAGGGTCCCTGAGGC GTCCACAGTACATACGGAAGTATCCAAAGGGTCCCTGAGGC < 41bp 0.462842423918766 0.82169077853922 0.26379934 0.38003877 prediction 0.643381557078441 Functional Gain - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087865 chr10:47087866 synonymous SNV . 0 22 hPsi_associated_SNPs_29562 0 0 0 0 0 unknown 0.438718611101385 0.43871859292176 0 0 hPsi_site_23286 iPseU_CNN:0;iRNA_PseU:0 23287 chrX 48370747 48370747 1 + C A UCEC 48370746 + 48370726 48370766 41 TTGTGGCCATGAAGGCAGTGTCTCTGGGCTTCGACCTGGAC TTGTGGCCATGAAGGCAGTGTATCTGGGCTTCGACCTGGAC < 41bp 0.554597024690235 0.876285181916463 0.30941737 0.54801357 prediction 0.643376314452457 Functional Gain - PORCN ENSG00000102312 CDS Human protein_coding chrX:48370746 chrX:48370747 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29563 0 0 0 0 1 nucleolus 0.438718619931295 0.43871412710258 0.0960271399999999 0 hPsi_site_23287 iPseU_CNN:0.0960271399999999;iRNA_PseU:0 23288 chr3 45052830 45052830 1 + G A rs146838012 45052829 + 45052809 45052849 41 AGAAAGTTGGATTCCTGGGATGATTTGCACATCAACTGCTC AGAAAGTTGGATTCCTGGGATAATTTGCACATCAACTGCTC < 41bp 0.574769694569003 0.896455985246065 0.2979672 0.41071627 prediction 0.643372581354124 Functional Gain - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45052829 chr3:45052830 synonymous SNV . 0 22 hPsi_associated_SNPs_29564 0 0 1 0 1 Ribosome 0.438718593027236 0.438718578642511 0 0 hPsi_site_23288 iPseU_CNN:0;iRNA_PseU:0 23289 chr3 9743959 9743959 1 + G A rs146925501 9743958 + 9743938 9743978 41 CTGGGGCCTTGTGGAAGCCATGACTTCACAAAGACCCTACC CTGGGGCCTTGTGGAAGCCATAACTTCACAAAGACCCTACC < 41bp 0.482310271766127 0.821685704808166 0.19481435 0.26841572 prediction 0.643371409616333 Functional Gain - MTMR14 ENSG00000163719 UTR3 Human protein_coding chr3:9743958 chr3:9743959 . . 0 22 hPsi_associated_SNPs_29565 0 0 0 2 0 Ribosome 0.438718592986504 0.438718593062942 0 0 hPsi_site_23289 iPseU_CNN:0;iRNA_PseU:0 23290 chr15 31200404 31200404 1 + G A UCEC 31200403 + 31200383 31200423 41 AAATTAGAGTATGAAGAGATTGCCTTAGACTTAACACCTGT AAATTAGAGTATGAAGAGATTACCTTAGACTTAACACCTGT < 41bp 0.417047045598464 0.821683305349726 0.26857263 0.61461425 prediction 0.643366610699452 Functional Gain - FAN1 ENSG00000198690 CDS Human protein_coding chr15:31200403 chr15:31200404 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_29566 0 0 1 0 2 Cytosol 0.438342392697161 0.438697408492499 0.2292285 0 hPsi_site_23290 iPseU_CNN:0.2292285;iRNA_PseU:0 23291 chr20 39981308 39981308 1 + G A rs151288462 39981307 + 39981287 39981327 41 AAAAACCCCGGACTTTTGGATGACCCAAACCTAGTGGTGAA AAAAACCCCGGACTTTTGGATAACCCAAACCTAGTGGTGAA < 41bp 0.397656720644057 0.821679944142355 0.23615965 0.5159983 prediction 0.64335988828471 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39981307 chr20:39981308 nonsynonymous SNV 0.792 1 22 hPsi_associated_SNPs_29567 0 0 0 1 2 Nucleus 0.438718592995102 0.438718594681171 0.0319966 0 hPsi_site_23291 iPseU_CNN:0.0319966;iRNA_PseU:0 23292 chrX 79699002 79699002 1 + C A UCEC 79699001 + 79698981 79699021 41 AGTTATGAAAGAAGACAGATTCTCCACCTGATCACCATGAT AGTTATGAAAGAAGACAGATTATCCACCTGATCACCATGAT < 41bp 0.526315679376535 0.847994625968573 0.20295379 0.262667 prediction 0.643357893184074 Functional Gain - FAM46D ENSG00000174016 CDS Human protein_coding chrX:79699001 chrX:79699002 nonsynonymous SNV 0.062 1 22 hPsi_associated_SNPs_29568 0 0 0 0 0 unknown 0.438322705960529 0.438407712396419 0 0 hPsi_site_23292 iPseU_CNN:0;iRNA_PseU:0 23293 chr6 160174521 160174521 1 + G A PAAD 160174520 + 160174500 160174540 41 GGAAAAAGTTAATGGCGAAGTGTCGAATGCTTATCCAGGAG GGAAAAAGTTAATGGCGAAGTATCGAATGCTTATCCAGGAG < 41bp 0.426450752601175 0.821676552255174 0.40000105 0.65114635 prediction 0.643353104510349 Functional Gain - WTAP ENSG00000146457 CDS Human protein_coding chr6:160174520 chr6:160174521 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29569 0 0 1 0 1 chromatin 0.438718063697785 0.438718592802539 0.3022927 0 hPsi_site_23293 iPseU_CNN:0.3022927;iRNA_PseU:0 23294 chr17 1936840 1936840 1 + G A LUAD 1936839 + 1936819 1936859 41 GTGGCCAATCAGATCCCCCCTGAGATCCTGAAGAACCCTCA GTGGCCAATCAGATCCCCCCTAAGATCCTGAAGAACCCTCA < 41bp 0.414700326148333 0.821672725332162 0.300672 0.33921415 prediction 0.643345450664324 Functional Gain - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1936839 chr17:1936840 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_29570 0 0 1 0 1 Endoplasmic reticulum 0.438718211804314 0.438761737717804 0 0 hPsi_site_23294 iPseU_CNN:0;iRNA_PseU:0 23295 chr1 150123193 150123193 1 + G A SKCM 150123192 + 150123172 150123212 41 AAGGGATTTTCAGGGAGATTTGGAAAAACCGCTATGTGGTG AAGGGATTTTCAGGGAGATTTAGAAAAACCGCTATGTGGTG < 41bp 0.569873179342878 0.891545323533883 0.41938764 0.5467562 prediction 0.643344288382011 Functional Gain - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150123192 chr1:150123193 stopgain 1.000 1 22 hPsi_associated_SNPs_29571 0 0 1 0 2 Ribosome 0.43871766376722 0.438718985759964 0.0935124000000001 0 hPsi_site_23295 iPseU_CNN:0.0935124000000001;iRNA_PseU:0 23296 chr19 35510150 35510150 1 + G T LUSC 35510149 + 35510129 35510169 41 GTGCCACCAGCGCCGGGTGCTGACGTACACCATCCCCATCA GTGCCACCAGCGCCGGGTGCTTACGTACACCATCCCCATCA < 41bp 0.476793110082391 0.821670009905252 0.37042737 0.7940226 prediction 0.643340019810505 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35510149 chr19:35510150 synonymous SNV . 0 22 hPsi_associated_SNPs_29572 0 0 1 0 2 Endoplasmic reticulum 0.43871859291074 0.438718591681285 0.5880452 0 hPsi_site_23296 iPseU_CNN:0.5880452;iRNA_PseU:0 23297 chr11 64806226 64806226 1 + G A LUAD 64806225 + 64806205 64806245 41 ATCACCCAGGCCCTGCGGGATGAGAAGGCAGGCGCTTACGC ATCACCCAGGCCCTGCGGGATAAGAAGGCAGGCGCTTACGC < 41bp 0.577795500413797 0.899463679300938 0.2717504 0.3020105 prediction 0.643336357774282 Functional Gain - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64806225 chr11:64806226 nonsynonymous SNV 0.290 4 22 hPsi_associated_SNPs_29573 0 0 1 0 1 Ribosome 0.438718791861414 0.438718592803974 0 0 hPsi_site_23297 iPseU_CNN:0;iRNA_PseU:0 23298 chr5 162910168 162910168 1 + G T LUSC 162910169 - 162910149 162910189 41 TCATAGATTACCTTCCTTCTTCATCTTCCAGCTGTTTTCTA TCATAGATTACCTTCCTTCTTAATCTTCCAGCTGTTTTCTA < 41bp 0.47975867222996 0.821667013422988 0.28539237 0.3793689 prediction 0.643334026845976 Functional Gain - HMMR ENSG00000072571 CDS Human protein_coding chr5:162910169 chr5:162910168 stopgain 0.457 0 22 hPsi_associated_SNPs_29574 0 0 0 0 0 Cytosol 0.438718592997183 0.438718592903458 0 0 hPsi_site_23298 iPseU_CNN:0;iRNA_PseU:0 23299 chr12 13208570 13208570 1 + G A LUAD 13208569 + 13208549 13208589 41 AGACGATCTGGTGCTTAACCTGCAGAAGAATGGAGGGGTCA AGACGATCTGGTGCTTAACCTACAGAAGAATGGAGGGGTCA < 41bp 0.40116037470468 0.821666720698089 0.3997907 0.47574976 prediction 0.643333441396179 Functional Gain - FAM234B ENSG00000084444 CDS Human protein_coding chr12:13208569 chr12:13208570 synonymous SNV . 0 22 hPsi_associated_SNPs_29575 0 0 1 1 1 Nucleus 0.438790537959302 0.438719323808435 0 0 hPsi_site_23299 iPseU_CNN:0;iRNA_PseU:0 23300 chrX 101971422 101971422 1 + C A UCEC 101971421 + 101971401 101971441 41 CAGAAGGAGAAGAGCAGGAATCTTTGCTTCAGCCTGATCAG CAGAAGGAGAAGAGCAGGAATATTTGCTTCAGCCTGATCAG < 41bp 0.465014532205161 0.821666533531119 0.6274205 0.46454448 prediction 0.643333067062239 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971421 chrX:101971422 nonsynonymous SNV 0.843 0 22 hPsi_associated_SNPs_29576 0 0 0 0 0 unknown 0.438715491939811 0.439511941756548 0 0 hPsi_site_23300 iPseU_CNN:0;iRNA_PseU:0 23301 chr3 140695147 140695147 1 + C A COAD 140695146 + 140695126 140695166 41 AAGAGGGAACAAAATACAGATCTTTTTTTCAGACTCTATCT AAGAGGGAACAAAATACAGATATTTTTTTCAGACTCTATCT < 41bp 0.488165457708563 0.821665575687246 0.2335405 0.26740396 prediction 0.643331151374492 Functional Gain - SLC25A36 ENSG00000114120 CDS Human protein_coding chr3:140695146 chr3:140695147 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_29577 0 0 1 0 2 Nucleus 0.437842140514198 0.438718593969544 0 0 hPsi_site_23301 iPseU_CNN:0;iRNA_PseU:0 23302 chrX 105855458 105855458 1 + C A UCEC 105855457 + 105855437 105855477 41 AGGTCCTGGATCCAAAAGGTTCTTGAGCAGATTATGGACTC AGGTCCTGGATCCAAAAGGTTATTGAGCAGATTATGGACTC < 41bp 0.467926765155744 0.82166264578793 0.74449015 0.79004914 prediction 0.64332529157586 Functional Gain - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855457 chrX:105855458 nonsynonymous SNV 0.985 1 22 hPsi_associated_SNPs_29578 0 0 0 0 0 nucleus 0.438718632133057 0.4388113580372 0.0911179800000002 0 hPsi_site_23302 iPseU_CNN:0.0911179800000002;iRNA_PseU:0 23303 chr15 57524560 57524560 1 + C A COAD 57524559 + 57524539 57524579 41 CAGCCTGGTTTTGGTGGAATTCTGGGGACCTCCACTTCCCA CAGCCTGGTTTTGGTGGAATTATGGGGACCTCCACTTCCCA < 41bp 0.475581683359685 0.821659887586995 0.20488194 0.46827343 prediction 0.64331977517399 Functional Gain - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57524559 chr15:57524560 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29579 0 0 1 0 2 Cytosol 0.438718593001155 0.438718601224513 0 0 hPsi_site_23303 iPseU_CNN:0;iRNA_PseU:0 23304 chr5 140023496 140023496 1 + C A CESC 140023495 + 140023475 140023515 41 TATCCTTCTGCAGTTCTTTTTCCAGAAACAGCCCAGTCTGC TATCCTTCTGCAGTTCTTTTTACAGAAACAGCCCAGTCTGC < 41bp 0.557514413562943 0.879173521132279 0.31294152 0.3860782 prediction 0.643318215138671 Functional Gain - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140023495 chr5:140023496 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_29580 0 0 1 0 1 chromatin 0.438684236979635 0.438718884044938 0 0 hPsi_site_23304 iPseU_CNN:0;iRNA_PseU:0 23305 chr5 181715 181715 1 + G A HNSC 181714 + 181694 181734 41 AGAGACCGGACCCCTGACTGTGCAGTGATAAGCGACCGGGC AGAGACCGGACCCCTGACTGTACAGTGATAAGCGACCGGGC < 41bp 0.394903846767886 0.821658328651917 0.34767792 0.6633679 prediction 0.643316657303834 Functional Gain - PLEKHG4B ENSG00000153404 CDS Human protein_coding chr5:181714 chr5:181715 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_29581 0 0 0 0 2 exosome 0.438719825948028 0.438718558673252 0.3267358 0 hPsi_site_23305 iPseU_CNN:0.3267358;iRNA_PseU:0 23306 chr2 73449041 73449041 1 + C A COAD 73449040 + 73449020 73449060 41 GAGGAAATTGTCCATAAACTTCTGGGAGACAAATTCAAGGT GAGGAAATTGTCCATAAACTTATGGGAGACAAATTCAAGGT < 41bp 0.451196510134257 0.821657027421994 0.3628382 0.49485403 prediction 0.643314054843988 Functional Gain - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73449040 chr2:73449041 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_29582 0 0 1 0 2 Ribosome 0.438718593367998 0.438718593316118 0 0 hPsi_site_23306 iPseU_CNN:0;iRNA_PseU:0 23307 chr12 41582333 41582333 1 + G A BLCA 41582332 + 41582312 41582352 41 AAACTGTGCGGCCAGGTGCTTGAAGAGCCCCTGTGCACGCC AAACTGTGCGGCCAGGTGCTTAAAGAGCCCCTGTGCACGCC < 41bp 0.432791251119878 0.821641081226484 0.4594735 0.9010521 prediction 0.643282162452968 Functional Gain - PDZRN4 ENSG00000165966 CDS Human protein_coding chr12:41582332 chr12:41582333 nonsynonymous SNV 0.863 1 22 hPsi_associated_SNPs_29583 0 0 0 0 0 exosome 0.438718592994085 0.438720938015119 0.8021042 0 hPsi_site_23307 iPseU_CNN:0.8021042;iRNA_PseU:0 23308 chr2 74782482 74782482 1 + G A UCEC 74782481 + 74782461 74782501 41 CCCCCTGAGCCCGGCGCCACTGCCTTCCGCCTGGACACTGC CCCCCTGAGCCCGGCGCCACTACCTTCCGCCTGGACACTGC < 41bp 0.572419009788988 0.894059979431336 0.28941816 0.35967383 prediction 0.643281939284696 Functional Gain - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74782481 chr2:74782482 nonsynonymous SNV 0.490 2 22 hPsi_associated_SNPs_29584 0 0 0 0 1 Cytosol 0.43871859299508 0.438718446336356 0 0 hPsi_site_23308 iPseU_CNN:0;iRNA_PseU:0 23309 chr2 103068524 103068524 1 + G A SKCM 103068523 + 103068503 103068543 41 AATGCGCTACCACATGCCTGTGAAAAACTCTCAGGGATTCA AATGCGCTACCACATGCCTGTAAAAAACTCTCAGGGATTCA < 41bp 0.435005746829855 0.821637098130535 0.4943799 0.87396264 prediction 0.643274196261069 Functional Gain - IL18RAP ENSG00000115607 CDS Human protein_coding chr2:103068523 chr2:103068524 synonymous SNV . 0 22 hPsi_associated_SNPs_29585 0 0 0 0 0 chromatin 0.438707919040873 0.4387051709363 0.74792528 0 hPsi_site_23309 iPseU_CNN:0.74792528;iRNA_PseU:0 23310 chr16 85833277 85833277 1 + G A rs2233448 85833276 + 85833256 85833296 41 CGGAGTCTTCCTCGATCCCGTGGTGCTCCGCGGCGCGGCCT CGGAGTCTTCCTCGATCCCGTAGTGCTCCGCGGCGCGGCCT < 41bp 0.523444637606587 0.845078564173334 0.2642137 0.6416407 prediction 0.643267853133495 Functional Gain - COX4I1 ENSG00000131143 UTR5 Human protein_coding chr16:85833276 chr16:85833277 . . 0 22 hPsi_associated_SNPs_29586 0 0 1 0 1 Ribosome 0.438718940983709 0.438718620592029 0.2832814 0 hPsi_site_23310 iPseU_CNN:0.2832814;iRNA_PseU:0 23311 chr17 37898880 37898880 1 + G A SKCM 37898879 + 37898859 37898899 41 TCTATCCCCAACCCCTTCCCTGAGCTCTGCAGTCCTCCCTC TCTATCCCCAACCCCTTCCCTAAGCTCTGCAGTCCTCCCTC < 41bp 0.397082816884889 0.821628834698808 0.28291225 0.43820634 prediction 0.643257669397617 Functional Gain - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37898879 chr17:37898880 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29587 0 0 1 0 2 Cytosol 0.438718975611539 0.438718600612751 0 0 hPsi_site_23311 iPseU_CNN:0;iRNA_PseU:0 23312 chr15 23812276 23812276 1 + G A rs541201885 23812275 + 23812255 23812295 41 GCATCAACTTGTGGAGCCTGTGCGAATGGGAGAGGGCAACA GCATCAACTTGTGGAGCCTGTACGAATGGGAGAGGGCAACA < 41bp 0.426362273441789 0.821622877661101 0.2740997 0.71973693 prediction 0.643245755322203 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23812275 chr15:23812276 synonymous SNV . 0 22 hPsi_associated_SNPs_29588 0 0 0 0 0 chromatin 0.438713159952614 0.438724735676769 0.43947386 0 hPsi_site_23312 iPseU_CNN:0.43947386;iRNA_PseU:0 23313 chr11 55322224 55322224 1 + G A SKCM 55322223 + 55322203 55322243 41 GTGACAAAAACCATCTCTTTTGAAGGCTGCATGATGCAGCT GTGACAAAAACCATCTCTTTTAAAGGCTGCATGATGCAGCT < 41bp 0.567308779327047 0.888929044350808 0.30669492 0.3399077 prediction 0.643240530047522 Functional Gain - OR4C15 ENSG00000181939 CDS Human protein_coding chr11:55322223 chr11:55322224 nonsynonymous SNV 0.150 0 22 hPsi_associated_SNPs_29589 0 0 0 0 0 unknown 0.438795263616085 0.43819239733222 0 0 hPsi_site_23313 iPseU_CNN:0;iRNA_PseU:0 23314 chr12 95907635 95907635 1 + G A rs111453050 95907634 + 95907614 95907654 41 ATTTGAACATACCATCCTGTTGCGTCCAACATGTAAAGAAG ATTTGAACATACCATCCTGTTACGTCCAACATGTAAAGAAG < 41bp 0.561163830942324 0.882781135297907 0.27702206 0.63627523 prediction 0.643234608711166 Functional Gain - METAP2 ENSG00000111142 CDS Human protein_coding chr12:95907634 chr12:95907635 synonymous SNV . 0 22 hPsi_associated_SNPs_29590 0 0 1 0 0 Ribosome 0.439630545132688 0.435665981459053 0.27255046 0 hPsi_site_23314 iPseU_CNN:0.27255046;iRNA_PseU:0 23315 chr17 7951083 7951083 1 + G T LUSC 7951082 + 7951062 7951102 41 GTTTGACTCCTGTGCTTGGATGCCCAACCTGCCACCCAGCA GTTTGACTCCTGTGCTTGGATTCCCAACCTGCCACCCAGCA < 41bp 0.512035868979194 0.833652225352491 0.20644546 0.26653 prediction 0.643232712746593 Functional Gain - ALOX15B ENSG00000179593 CDS Human protein_coding chr17:7951082 chr17:7951083 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29591 0 0 0 0 1 exosome 0.438718592995102 0.438718592995102 0 0 hPsi_site_23315 iPseU_CNN:0;iRNA_PseU:0 23316 chr12 121134327 121134327 1 + C A CESC 121134326 + 121134306 121134346 41 CGGAGTCTTCATTCCAACCCTCTTCTGCCTCTGCCGGTTGT CGGAGTCTTCATTCCAACCCTATTCTGCCTCTGCCGGTTGT < 41bp 0.470396563658265 0.821612758521707 0.27832687 0.33465412 prediction 0.643225517043414 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121134326 chr12:121134327 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29592 0 0 1 0 0 Ribosome 0.442770030602245 0.422489398317099 0 0 hPsi_site_23316 iPseU_CNN:0;iRNA_PseU:0 23317 chr21 37443291 37443291 1 + G A CESC 37443290 + 37443270 37443310 41 TATTCAAGCTGAAGTGACGATGAAAACAAATTTCTTTGGTA TATTCAAGCTGAAGTGACGATAAAAACAAATTTCTTTGGTA < 41bp 0.405058062430299 0.821608434970309 0.32144508 0.6140831 prediction 0.643216869940619 Functional Gain - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37443290 chr21:37443291 nonsynonymous SNV 0.987 2 22 hPsi_associated_SNPs_29593 0 0 1 0 2 Ribosome 0.438722786808128 0.438718593004067 0.2281662 0 hPsi_site_23317 iPseU_CNN:0.2281662;iRNA_PseU:0 23318 chr15 34649336 34649336 1 + G A rs149177074 34649335 + 34649315 34649355 41 AAGGAAGCAGAGGAAGAGGATGAGGAACTCTCCAACTTTGC AAGGAAGCAGAGGAAGAGGATAAGGAACTCTCCAACTTTGC < 41bp 0.408677895418165 0.821604142987977 0.29791024 0.47392684 prediction 0.643208285975953 Functional Gain - NUTM1 ENSG00000184507 CDS Human protein_coding chr15:34649335 chr15:34649336 nonsynonymous SNV 0.670 0 22 hPsi_associated_SNPs_29594 0 0 0 0 0 exosome 0.438718593010608 0.438718592995114 0 0 hPsi_site_23318 iPseU_CNN:0;iRNA_PseU:0 23319 chr16 24881228 24881228 1 + G A UCEC 24881227 + 24881207 24881247 41 TCCATCTCCCCACAGGTGGGTGCATCCTTGTTTGCCAGCAA TCCATCTCCCCACAGGTGGGTACATCCTTGTTTGCCAGCAA < 41bp 0.409489261945395 0.821603832686867 0.26616785 0.7289318 prediction 0.643207665373734 Functional Gain - SLC5A11 ENSG00000158865 CDS Human protein_coding chr16:24881227 chr16:24881228 nonsynonymous SNV 0.991 5 22 hPsi_associated_SNPs_29595 0 0 0 0 2 exosome 0.438718546992615 0.438692757617405 0.4578636 0 hPsi_site_23319 iPseU_CNN:0.4578636;iRNA_PseU:0 23320 chr22 39427788 39427788 1 + C A COAD 39427787 + 39427767 39427807 41 TCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGA TCCTAACACAAACTACGAGGTAACCTGGTACACATCTTGGA < 41bp 0.44373764868244 0.82159970710729 0.2542758 0.8718244 prediction 0.643199414214579 Functional Gain - APOBEC3D ENSG00000243811 CDS Human protein_coding chr22:39427787 chr22:39427788 synonymous SNV . 0 22 hPsi_associated_SNPs_29596 0 0 0 0 1 Nucleus 0.439159075373367 0.438720750876598 0.7436488 0 hPsi_site_23320 iPseU_CNN:0.7436488;iRNA_PseU:0 23321 chr10 102763514 102763514 1 + C A LGG 102763513 + 102763493 102763533 41 CATCAGGGACGCTATCCGACTCTGGCCGAAACTCACTGTCC CATCAGGGACGCTATCCGACTATGGCCGAAACTCACTGTCC < 41bp 0.555328129355304 0.876927718981632 0.8074999 0.95574546 prediction 0.643199179252656 Functional Gain - LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763513 chr10:102763514 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_29597 0 0 1 0 0 Ribosome 0.438718592996011 0.439058898341001 0.29649112 0 hPsi_site_23321 iPseU_CNN:0.29649112;iRNA_PseU:0 23322 chr1 117603091 117603091 1 + C A UCEC 117603090 + 117603070 117603110 41 TCTTCAGGGACTTTCTGCTTTCTTAAGACCGGCGTCCGCGA TCTTCAGGGACTTTCTGCTTTATTAAGACCGGCGTCCGCGA < 41bp 0.544333340836031 0.865928139512212 0.55240095 0.6213216 prediction 0.643189597352362 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117603090 chr1:117603091 nonsynonymous SNV 0.203 3 22 hPsi_associated_SNPs_29598 0 0 1 0 2 Nucleus 0.438718592911385 0.438718742611175 0.1378413 0 hPsi_site_23322 iPseU_CNN:0.1378413;iRNA_PseU:0 23323 chr10 50819710 50819710 1 + C A rs200094927 50819709 + 50819689 50819729 41 TAACATTCCCCTCGCCTTCCTCGAACCCACCATTGCCACGT TAACATTCCCCTCGCCTTCCTAGAACCCACCATTGCCACGT < 41bp 0.477520507363119 0.821591737726472 0.17467874 0.59383523 prediction 0.643183475452943 Functional Gain - SLC18A3 ENSG00000187714 CDS Human protein_coding chr10:50819709 chr10:50819710 synonymous SNV . 0 22 hPsi_associated_SNPs_29599 0 0 0 0 0 exosome 0.438718853311683 0.438718592995102 0.18767046 0 hPsi_site_23323 iPseU_CNN:0.18767046;iRNA_PseU:0 23324 chr1 26156237 26156237 1 + G T SARC 26156236 + 26156216 26156256 41 GTTCGTCTGAAGAGGATGACTGCGTCTCTTTGTCCAAGGCC GTTCGTCTGAAGAGGATGACTTCGTCTCTTTGTCCAAGGCC < 41bp 0.516857335056245 0.838447379166629 0.23600072 0.38262725 prediction 0.643180088220767 Functional Gain - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26156236 chr1:26156237 nonsynonymous SNV 0.962 2 22 hPsi_associated_SNPs_29600 0 0 1 0 1 Ribosome 0.438718601304429 0.438718541352995 0 0 hPsi_site_23324 iPseU_CNN:0;iRNA_PseU:0 23325 chr6 31107522 31107522 1 + C A COAD 31107521 + 31107501 31107541 41 AGGAGGATATCCTGGTTCCCTCTTCCCACCCAGAGCTGTTT AGGAGGATATCCTGGTTCCCTATTCCCACCCAGAGCTGTTT < 41bp 0.505160367898077 0.826749482384883 0.29655758 0.4344441 prediction 0.643178228973612 Functional Gain - PSORS1C1 ENSG00000204540 CDS Human protein_coding chr6:31107521 chr6:31107522 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_29601 0 0 0 2 0 Cytosol 0.438713573619619 0.440884171278531 0 0 hPsi_site_23325 iPseU_CNN:0;iRNA_PseU:0 23326 chr1 2428427 2428427 1 + C A rs188411160 2428426 + 2428406 2428446 41 CAACTACAACCCGCAGCCCTTCTGGAACGCCGGCTGCCAAA CAACTACAACCCGCAGCCCTTATGGAACGCCGGCTGCCAAA < 41bp 0.542332081902919 0.86391790400677 0.64634335 0.41488004 prediction 0.6431716442077 Functional Gain - PLCH2 ENSG00000149527 CDS Human protein_coding chr1:2428426 chr1:2428427 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_29602 0 0 0 0 1 nucleus 0.438719569752426 0.438718640728025 0 0 hPsi_site_23326 iPseU_CNN:0;iRNA_PseU:0 23327 chr6 159129366 159129366 1 + G A UCEC 159129365 + 159129345 159129385 41 CCTTGGCAGCAAAATTTCTGTGGTTCCTCCTACTCCACCTC CCTTGGCAGCAAAATTTCTGTAGTTCCTCCTACTCCACCTC < 41bp 0.398379525075284 0.821583360288844 0.28007025 0.7638603 prediction 0.643166720577688 Functional Gain - SYTL3 ENSG00000164674 CDS Human protein_coding chr6:159129365 chr6:159129366 synonymous SNV . 0 22 hPsi_associated_SNPs_29603 0 0 0 0 1 exosome 0.438718592995102 0.438716644242396 0.5277206 0 hPsi_site_23327 iPseU_CNN:0.5277206;iRNA_PseU:0 23328 chr14 23567204 23567204 1 + G T UCEC 23567203 + 23567183 23567223 41 TGGGCTGAGCAGGAGCGCAATGAATTTGTCAGACAGCTGGA TGGGCTGAGCAGGAGCGCAATTAATTTGTCAGACAGCTGGA < 41bp 0.505278411275862 0.826857568027955 0.19097537 0.24651709 prediction 0.643158313504187 Functional Gain - C14orf119 ENSG00000179933 CDS Human protein_coding chr14:23567203 chr14:23567204 stopgain 1.000 1 22 hPsi_associated_SNPs_29604 0 0 1 0 0 Ribosome 0.438369342216591 0.440128939110494 0 0 hPsi_site_23328 iPseU_CNN:0;iRNA_PseU:0 23329 chr6 80723040 80723040 1 + C A UCEC 80723039 + 80723019 80723059 41 GAGATTTGGTTGTGCCTGGATCTAAACCAAGTGGAAATGAT GAGATTTGGTTGTGCCTGGATATAAACCAAGTGGAAATGAT < 41bp 0.478248723713824 0.8215761330649 0.7689967 0.76091266 prediction 0.643152266129799 Functional Gain - TTK ENSG00000112742 CDS Human protein_coding chr6:80723039 chr6:80723040 nonsynonymous SNV 0.650 1 22 hPsi_associated_SNPs_29605 0 0 1 0 2 chromatin 0.436900199570084 0.440751362366024 0 0 hPsi_site_23329 iPseU_CNN:0;iRNA_PseU:0 23330 chr12 50501442 50501442 1 + G A SKCM 50501441 + 50501421 50501461 41 CCGGCTGGGACTCATGGAGATGATAGCCTTCGCCAAGCTCT CCGGCTGGGACTCATGGAGATAATAGCCTTCGCCAAGCTCT < 41bp 0.392103113878731 0.821574046276047 0.23193502 0.5049236 prediction 0.643148092552093 Functional Gain - GPD1 ENSG00000167588 CDS Human protein_coding chr12:50501441 chr12:50501442 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29606 0 0 1 0 1 Cytosol 0.438718493775894 0.43872087511212 0.00984720000000006 0 hPsi_site_23330 iPseU_CNN:0.00984720000000006;iRNA_PseU:0 23331 chr16 28946814 28946814 1 + G A UCEC 28946813 + 28946793 28946833 41 TGGCTGGAAGGTCTCAGCTGTGACTTTGGCTTATCTGATCT TGGCTGGAAGGTCTCAGCTGTAACTTTGGCTTATCTGATCT < 41bp 0.39343460917503 0.82157376125896 0.3248642 0.4171077 prediction 0.64314752251792 Functional Gain - CD19 ENSG00000177455 CDS Human protein_coding chr16:28946813 chr16:28946814 synonymous SNV . 0 22 hPsi_associated_SNPs_29607 0 0 0 0 2 exosome 0.438474629167392 0.438963871743263 0 0 hPsi_site_23331 iPseU_CNN:0;iRNA_PseU:0 23332 chr1 44878028 44878028 1 + G T LUAD 44878027 + 44878007 44878047 41 CCAGGCACTTTTGCCAATCGTGATTTCCCCCCTTCTCTACT CCAGGCACTTTTGCCAATCGTTATTTCCCCCCTTCTCTACT < 41bp 0.501569412263739 0.823139614500694 0.22824654 0.33237785 prediction 0.64314040447391 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878027 chr1:44878028 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29608 0 0 1 0 0 Ribosome 0.438719440817146 0.438718593142211 0 0 hPsi_site_23332 iPseU_CNN:0;iRNA_PseU:0 23333 chrX 153641870 153641870 1 + C A UCEC 153641869 + 153641849 153641889 41 CAAGGAGCTACACTCCCACTTCTTCAGCTTGGGCAAGTGTG CAAGGAGCTACACTCCCACTTATTCAGCTTGGGCAAGTGTG < 41bp 0.549011699892269 0.870581768945738 0.21545658 0.22589937 prediction 0.643140138106939 Functional Gain - TAZ ENSG00000102125 CDS Human protein_coding chrX:153641869 chrX:153641870 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29609 0 0 1 0 2 Ribosome 0.437855311668319 0.438717382624705 0 0 hPsi_site_23333 iPseU_CNN:0;iRNA_PseU:0 23334 chr11 121061443 121061443 1 + C A UCEC 121061442 + 121061422 121061462 41 TTCTTCAATGGAACTTCAAGTCTGGACGCTTCTTCTCATCA TTCTTCAATGGAACTTCAAGTATGGACGCTTCTTCTCATCA < 41bp 0.469948314155477 0.821568689213147 0.2658695 0.5907141 prediction 0.643137378426293 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:121061442 chr11:121061443 synonymous SNV . 0 22 hPsi_associated_SNPs_29610 0 0 0 0 1 exosome 0.43868678144702 0.43868007834894 0.1814282 0 hPsi_site_23334 iPseU_CNN:0.1814282;iRNA_PseU:0 23335 chr10 74631198 74631198 1 + G A COAD 74631197 + 74631177 74631217 41 TTGGTGCTATGGGGTGGCCTTGCCTACATGGCCACACAGTT TTGGTGCTATGGGGTGGCCTTACCTACATGGCCACACAGTT < 41bp 0.585610893812126 0.907168251443908 0.25052673 0.6387444 prediction 0.643114715263563 Functional Gain - MCU ENSG00000156026 CDS Human protein_coding chr10:74631197 chr10:74631198 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29611 0 0 1 0 1 Ribosome 0.438718242201287 0.438718485230617 0.2774888 0 hPsi_site_23335 iPseU_CNN:0.2774888;iRNA_PseU:0 23336 chr7 98254326 98254326 1 + G A BLCA 98254325 + 98254305 98254345 41 AAGATCAAGAAGACGCTGCCTGAGCTGTACGCCTTCACCAT AAGATCAAGAAGACGCTGCCTAAGCTGTACGCCTTCACCAT < 41bp 0.400863127744872 0.821557049419631 0.29308942 0.43196052 prediction 0.643114098839262 Functional Gain - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98254325 chr7:98254326 nonsynonymous SNV 0.896 4 22 hPsi_associated_SNPs_29612 0 0 1 0 1 exosome 0.438718033954288 0.438720926707796 0 0 hPsi_site_23336 iPseU_CNN:0;iRNA_PseU:0 23337 chr3 184100892 184100892 1 + G A LUAD 184100891 + 184100871 184100911 41 AGCTGCAGATGGCCCTGGAGTGGGCAGGCAGGCCAGGGCTG AGCTGCAGATGGCCCTGGAGTAGGCAGGCAGGCCAGGGCTG < 41bp 0.401254513952708 0.821553321347093 0.3340389 0.57522047 prediction 0.643106642694186 Functional Gain - CHRD ENSG00000090539 CDS Human protein_coding chr3:184100891 chr3:184100892 stopgain 0.866 1 22 hPsi_associated_SNPs_29613 0 0 1 0 2 nucleus 0.438718469352744 0.438718592844463 0.15044094 0 hPsi_site_23337 iPseU_CNN:0.15044094;iRNA_PseU:0 23338 chr11 55541339 55541339 1 + C A LGG 55541338 + 55541318 55541358 41 CACTATTATGTCTCAGAAGCTCTGTGCTCTTCTGGTGGCTG CACTATTATGTCTCAGAAGCTATGTGCTCTTCTGGTGGCTG < 41bp 0.530781721991629 0.852329969015873 0.42102185 0.45426083 prediction 0.643096494048489 Functional Gain - OR5D13 ENSG00000198877 CDS Human other chr11:55541338 chr11:55541339 synonymous SNV . 0 22 hPsi_associated_SNPs_29614 0 0 0 0 0 unknown 0.439287224111785 0.438771624892583 0 0 hPsi_site_23338 iPseU_CNN:0;iRNA_PseU:0 23339 chr6 7585993 7585993 1 + C A HNSC 7585992 + 7585972 7586012 41 GCTCCGGCTCCCGCTCGGGATCTCGCTCCGGATCTCGCTCC GCTCCGGCTCCCGCTCGGGATATCGCTCCGGATCTCGCTCC < 41bp 0.524037294378239 0.84558273384702 0.53199166 0.7166152 prediction 0.643090878937562 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7585992 chr6:7585993 nonsynonymous SNV 0.151 4 22 hPsi_associated_SNPs_29615 0 0 1 0 0 Nucleus 0.438718599178863 0.438718573096104 0.36924708 0 hPsi_site_23339 iPseU_CNN:0.36924708;iRNA_PseU:0 23340 chr12 56863238 56863238 1 + G A LUAD 56863237 + 56863217 56863257 41 GAAGCTGAGCCTGGTGGATGTGAGCCAGGTCTCTGTGGTTC GAAGCTGAGCCTGGTGGATGTAAGCCAGGTCTCTGTGGTTC < 41bp 0.587477564613284 0.9090215447841 0.29532254 0.6323959 prediction 0.643087960341633 Functional Gain - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863237 chr12:56863238 synonymous SNV . 0 22 hPsi_associated_SNPs_29616 0 0 0 0 0 Cytosol 0.435827474626277 0.438748379231766 0.2647918 0 hPsi_site_23340 iPseU_CNN:0.2647918;iRNA_PseU:0 23341 chr6 146865181 146865181 1 + C A rs142273767 146865180 + 146865160 146865200 41 CCAGCACTACCGGGCCACCATCGGGGTGGACTTCGCCCTCA CCAGCACTACCGGGCCACCATAGGGGTGGACTTCGCCCTCA < 41bp 0.455427097779057 0.821543494957112 0.2821821 0.4458825 prediction 0.643086989914224 Functional Gain - RAB32 ENSG00000118508 CDS Human protein_coding chr6:146865180 chr6:146865181 synonymous SNV . 0 22 hPsi_associated_SNPs_29617 0 0 1 0 1 Ribosome 0.438719699475013 0.438718733822285 0 0 hPsi_site_23341 iPseU_CNN:0;iRNA_PseU:0 23342 chr15 40660395 40660395 1 + G A KIRC 40660394 + 40660374 40660414 41 GCGTCTGCTCTTCCAGCGCCTGCTGCCCTGCGGCGTCATCA GCGTCTGCTCTTCCAGCGCCTACTGCCCTGCGGCGTCATCA < 41bp 0.412254592101759 0.821540922477358 0.22776023 0.3110356 prediction 0.643081844954716 Functional Gain - DISP2 ENSG00000140323 CDS Human protein_coding chr15:40660394 chr15:40660395 synonymous SNV . 0 22 hPsi_associated_SNPs_29618 0 0 0 0 0 nucleus 0.438718669396687 0.438717199909897 0 0 hPsi_site_23342 iPseU_CNN:0;iRNA_PseU:0 23343 chr4 99341226 99341226 1 + C A COAD 99341225 + 99341205 99341245 41 ACAGAGGCAGTTTTGAAATTTCTTAAATCTGAAATGCCTCC ACAGAGGCAGTTTTGAAATTTATTAAATCTGAAATGCCTCC < 41bp 0.458641440714643 0.821539914534554 0.30804133 0.34059855 prediction 0.643079829069109 Functional Gain - RAP1GDS1 ENSG00000138698 CDS Human protein_coding chr4:99341225 chr4:99341226 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29619 0 0 1 0 2 Ribosome 0.438718774262914 0.438718933434319 0 0 hPsi_site_23343 iPseU_CNN:0;iRNA_PseU:0 23344 chrX 107370213 107370213 1 + G A rs191829542 107370212 + 107370192 107370232 41 CAGGAGAGGAAGTTAGGCATTGTGGAGCTCCTCCTGAGCCT CAGGAGAGGAAGTTAGGCATTATGGAGCTCCTCCTGAGCCT < 41bp 0.49009987259366 0.821533900474238 0.34500593 0.34543887 prediction 0.643067800948476 Functional Gain - ATG4A ENSG00000101844;ENSG00000101844 UTR5;UTR3 Human other chrX:107370212 chrX:107370213 . . 0 22 hPsi_associated_SNPs_29620 0 0 0 0 0 Ribosome 0.438717210651813 0.43871684382151 0 0 hPsi_site_23344 iPseU_CNN:0;iRNA_PseU:0 23345 chr2 27121428 27121428 1 + G T LUSC 27121427 + 27121407 27121447 41 GGAGGCAAGGTGGTGAACGATGACTGCACCCACGAGGCTGA GGAGGCAAGGTGGTGAACGATTACTGCACCCACGAGGCTGA < 41bp 0.520704529953231 0.842237009641205 0.27742335 0.51547366 prediction 0.643064959375947 Functional Gain - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27121427 chr2:27121428 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29621 0 0 1 0 1 Ribosome 0.43871325376203 0.438719115208216 0.0309473199999999 0 hPsi_site_23345 iPseU_CNN:0.0309473199999999;iRNA_PseU:0 23346 chr1 110558969 110558969 1 + G A rs149672808 110558968 + 110558948 110558988 41 GACCTCTTCTCTCTTTAGGCTGTATCAGCTCTCCAAAGCTG GACCTCTTCTCTCTTTAGGCTATATCAGCTCTCCAAAGCTG < 41bp 0.580643205725059 0.902175588329427 0.22890541 0.28370005 prediction 0.643064765208737 Functional Gain - AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110558968 chr1:110558969 synonymous SNV . 0 22 hPsi_associated_SNPs_29622 0 0 1 0 1 Ribosome 0.438719107387313 0.438718599332453 0 0 hPsi_site_23346 iPseU_CNN:0;iRNA_PseU:0 23347 chr5 159344638 159344638 1 + G A CESC 159344637 + 159344617 159344657 41 GAACCTAGAGGCAGGAGTCATGAAGGAGATGTCCAACTCCA GAACCTAGAGGCAGGAGTCATAAAGGAGATGTCCAACTCCA < 41bp 0.570106988845022 0.891636941659652 0.23698193 0.3877995 prediction 0.643059905629261 Functional Gain - ADRA1B ENSG00000170214 CDS Human protein_coding chr5:159344637 chr5:159344638 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29623 0 0 0 0 0 exosome 0.43922754935492 0.438375069247483 0 0 hPsi_site_23347 iPseU_CNN:0;iRNA_PseU:0 23348 chr17 1638906 1638906 1 + G A LUSC 1638905 + 1638885 1638925 41 GGAGCCGCTGGACAGCCGGGTGCCCCTGACTGCGGTGGCTG GGAGCCGCTGGACAGCCGGGTACCCCTGACTGCGGTGGCTG < 41bp 0.404132513568502 0.82152506728893 0.25820154 0.7716254 prediction 0.643050134577861 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1638905 chr17:1638906 synonymous SNV . 0 22 hPsi_associated_SNPs_29624 0 0 0 0 1 Endoplasmic reticulum 0.438710256845483 0.438725280132217 0.5432508 0 hPsi_site_23348 iPseU_CNN:0.5432508;iRNA_PseU:0 23349 chr1 32052509 32052509 1 + G A SKCM 32052508 + 32052488 32052528 41 CGCATCGTGCGCGGCGTCAATGAGTGCGACATCGAGAGCTT CGCATCGTGCGCGGCGTCAATAAGTGCGACATCGAGAGCTT < 41bp 0.568099012649042 0.889623569097904 0.33037084 0.44566482 prediction 0.643049112897723 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32052508 chr1:32052509 nonsynonymous SNV 0.959 5 22 hPsi_associated_SNPs_29625 0 0 0 0 1 Ribosome 0.477858170043914 0.438431402226862 0 0 hPsi_site_23349 iPseU_CNN:0;iRNA_PseU:0 23350 chr6 43638529 43638529 1 + C A LUAD 43638528 + 43638508 43638548 41 CTGCCTGTCTTATCTCAGGGTCCTGGAGCATCCAGATGGAG CTGCCTGTCTTATCTCAGGGTACTGGAGCATCCAGATGGAG < 41bp 0.460535239222723 0.821521213115816 0.20851001 0.59980786 prediction 0.643042426231632 Functional Gain - RSPH9 ENSG00000172426 CDS Human protein_coding chr6:43638528 chr6:43638529 nonsynonymous SNV 0.993 3 22 hPsi_associated_SNPs_29626 0 0 0 0 0 chromatin 0.438718592994987 0.438718592979411 0.19961572 0 hPsi_site_23350 iPseU_CNN:0.19961572;iRNA_PseU:0 23351 chr9 100403901 100403901 1 + C A UCEC 100403900 + 100403880 100403920 41 GCTGGTGTTTTGGAAGCTGATCTTCCTAACTACAAGAGCAA GCTGGTGTTTTGGAAGCTGATATTCCTAACTACAAGAGCAA < 41bp 0.543332571461516 0.864846712142768 0.36366898 0.6889903 prediction 0.643028281362503 Functional Gain - NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100403900 chr9:100403901 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29627 0 0 1 0 0 Nucleus 0.438669685486208 0.438759830214558 0.3779806 0 hPsi_site_23351 iPseU_CNN:0.3779806;iRNA_PseU:0 23352 chr17 40690500 40690500 1 + G A rs115680529 40690499 + 40690479 40690519 41 GCACATCAAGCAGCTTTACCTGCAGGTAAAAGGATGGAAAA GCACATCAAGCAGCTTTACCTACAGGTAAAAGGATGGAAAA < 41bp 0.417962419947614 0.82151342288701 0.27835858 0.482078 prediction 0.643026845774021 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40690499 chr17:40690500 synonymous SNV . 0 22 hPsi_associated_SNPs_29628 0 0 0 0 1 Endoplasmic reticulum 0.438716126274602 0.43871858777841 0 0 hPsi_site_23352 iPseU_CNN:0;iRNA_PseU:0 23353 chr3 49713611 49713611 1 + G A BLCA 49713610 + 49713590 49713630 41 TTGGACGTCAGTGCCAGCGATGATGAGATAGCCAGGCTGAA TTGGACGTCAGTGCCAGCGATAATGAGATAGCCAGGCTGAA < 41bp 0.395938043817148 0.821509303048938 0.20653507 0.24606627 prediction 0.643018606097876 Functional Gain - APEH ENSG00000164062 CDS Human protein_coding chr3:49713610 chr3:49713611 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_29629 0 0 1 0 1 Cytosol 0.438707971969615 0.438704814329933 0 0 hPsi_site_23353 iPseU_CNN:0;iRNA_PseU:0 23354 chr16 85695298 85695298 1 + C A rs61737039 85695297 + 85695277 85695317 41 TGCCTACATCTATGATGAGTTCCTGCAGCAGCGCCGGAGGC TGCCTACATCTATGATGAGTTACTGCAGCAGCGCCGGAGGC < 41bp 0.550184325010248 0.871689193232547 0.24809027 0.66924274 prediction 0.643009736444599 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85695297 chr16:85695298 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_29630 0 0 1 0 1 Cytosol 0.438718615066722 0.438719538635495 0.33848548 0 hPsi_site_23354 iPseU_CNN:0.33848548;iRNA_PseU:0 23355 chr6 117201759 117201759 1 + C A UCEC 117201758 + 117201738 117201778 41 GTTTGCTTACCACGGTGCATTCTTTATGCACACTACTTAGA GTTTGCTTACCACGGTGCATTATTTATGCACACTACTTAGA < 41bp 0.547137616288181 0.86864009598731 0.21428752 0.30214065 prediction 0.643004959398257 Functional Gain - RFX6 ENSG00000185002 CDS Human protein_coding chr6:117201758 chr6:117201759 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_29631 0 0 1 0 2 membrane 0.389895061574367 0.457538057525421 0 0 hPsi_site_23355 iPseU_CNN:0;iRNA_PseU:0 23356 chr2 220501566 220501566 1 + C A COAD 220501565 + 220501545 220501585 41 CTTTCTCATCTCACTCATTTTCATCTACGAGACCTTCTACA CTTTCTCATCTCACTCATTTTAATCTACGAGACCTTCTACA < 41bp 0.54399271616706 0.86549310187307 0.35387084 0.7534882 prediction 0.643000771412019 Functional Gain - SLC4A3 ENSG00000114923 CDS Human protein_coding chr2:220501565 chr2:220501566 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29632 0 0 0 0 1 Cytosol 0.438508583552125 0.43864988663886 0.5069764 0 hPsi_site_23356 iPseU_CNN:0.5069764;iRNA_PseU:0 23357 chrX 102885010 102885010 1 + G A BLCA 102885009 + 102884989 102885029 41 TTTCCTGAGGAGCTCTTGCCTGAGCTCCTGCCTGAGATGCT TTTCCTGAGGAGCTCTTGCCTAAGCTCCTGCCTGAGATGCT < 41bp 0.580768113249602 0.902266618288787 0.49382448 0.8682295 prediction 0.642997010078369 Functional Gain - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102885009 chrX:102885010 nonsynonymous SNV 0.949 3 22 hPsi_associated_SNPs_29633 0 0 1 0 0 Cytosol 0.438718979784878 0.438720057064993 0.736459 0 hPsi_site_23357 iPseU_CNN:0.736459;iRNA_PseU:0 23358 chr13 24242195 24242195 1 + G A ESCA 24242194 + 24242174 24242214 41 GGCGACTCTTGGTTGTGGGGTGCATTCTGCAGCCAGTCTTC GGCGACTCTTGGTTGTGGGGTACATTCTGCAGCCAGTCTTC < 41bp 0.588769337960312 0.910267049774405 0.36940682 0.6298746 prediction 0.642995423628185 Functional Gain - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24242194 chr13:24242195 synonymous SNV . 0 22 hPsi_associated_SNPs_29634 0 0 1 0 2 cytosol 0.438758779630591 0.439041149768442 0.2597492 0 hPsi_site_23358 iPseU_CNN:0.2597492;iRNA_PseU:0 23359 chr5 140531155 140531155 1 + C A GBM 140531154 + 140531134 140531174 41 GCAGAGCATAACTGTGCAGGTCTCCGACGTCAATGACAACG GCAGAGCATAACTGTGCAGGTATCCGACGTCAATGACAACG < 41bp 0.460016723603609 0.821486880269633 0.21552238 0.65712607 prediction 0.642973760539266 Functional Gain - PCDHB6 ENSG00000113211 CDS Human protein_coding chr5:140531154 chr5:140531155 synonymous SNV . 0 22 hPsi_associated_SNPs_29635 0 0 0 0 0 exosome 0.438718618442873 0.438717852996487 0.31425214 0 hPsi_site_23359 iPseU_CNN:0.31425214;iRNA_PseU:0 23360 chr3 136573929 136573929 1 + G A UCEC 136573928 + 136573908 136573948 41 TACAGTCTTCAGTGCCATTTTGGCTTTTTTACTCGTAGATG TACAGTCTTCAGTGCCATTTTAGCTTTTTTACTCGTAGATG < 41bp 0.403158488798851 0.821485788398467 0.15447754 0.21358413 prediction 0.642971576796933 Functional Gain - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136573928 chr3:136573929 synonymous SNV . 0 22 hPsi_associated_SNPs_29636 0 0 1 0 0 nucleolus 0.438718592993844 0.438718587100304 0 0 hPsi_site_23360 iPseU_CNN:0;iRNA_PseU:0 23361 chr14 102391583 102391583 1 + G A CESC 102391582 + 102391562 102391602 41 GAAGCTCACTGCAGGGCCGATGAGCTGGCCTCCCAGGACGG GAAGCTCACTGCAGGGCCGATAAGCTGGCCTCCCAGGACGG < 41bp 0.42701380402655 0.821485554805709 0.38889986 0.55607086 prediction 0.642971109611418 Functional Gain - PPP2R5C ENSG00000078304 CDS Human protein_coding chr14:102391582 chr14:102391583 nonsynonymous SNV 0.912 2 22 hPsi_associated_SNPs_29637 0 0 1 0 0 Cytosol 0.438718592981934 0.438718592986974 0.11214172 0 hPsi_site_23361 iPseU_CNN:0.11214172;iRNA_PseU:0 23362 chr10 89717689 89717689 1 + C A UCEC 89717688 + 89717668 89717708 41 CACACGACGGGAAGACAAGTTCATGTACTTTGAGTTCCCTC CACACGACGGGAAGACAAGTTAATGTACTTTGAGTTCCCTC < 41bp 0.545145493188417 0.866627107044242 0.34478575 0.4340127 prediction 0.64296322771165 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717688 chr10:89717689 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29638 0 0 1 0 2 Ribosome 0.438716517296635 0.438716924892582 0 0 hPsi_site_23362 iPseU_CNN:0;iRNA_PseU:0 23363 chr2 207823079 207823079 1 + C A CESC 207823078 + 207823058 207823098 41 ATTTGGATGGACTGTGGAATTCACGCCAGAGAATGGATTGC ATTTGGATGGACTGTGGAATTAACGCCAGAGAATGGATTGC < 41bp 0.544834230619004 0.866314078230393 0.22297245 0.63825804 prediction 0.642959695222778 Functional Gain - CPO ENSG00000144410 CDS Human protein_coding chr2:207823078 chr2:207823079 nonsynonymous SNV 0.910 4 22 hPsi_associated_SNPs_29639 0 0 1 0 2 exosome 0.438651939179245 0.438763865132461 0.27651608 0 hPsi_site_23363 iPseU_CNN:0.27651608;iRNA_PseU:0 23364 chr3 129197018 129197018 1 + G A STAD 129197017 + 129196997 129197037 41 AGATTATCAAGAAGTTTGAGTGCAACCTCCTGGTGGTGTGT AGATTATCAAGAAGTTTGAGTACAACCTCCTGGTGGTGTGT < 41bp 0.453479837748044 0.82147742868788 0.32866502 0.72872055 prediction 0.642954857375761 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129197017 chr3:129197018 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29640 0 0 1 1 1 Nucleus 0.438718535691067 0.438719055072356 0.4574411 0 hPsi_site_23364 iPseU_CNN:0.4574411;iRNA_PseU:0 23365 chr21 45209463 45209463 1 + G A rs373081728 45209462 + 45209442 45209482 41 CAGGAGGCGCGTGCTCAGTGTGCTGGGTACCAGGCGACTCC CAGGAGGCGCGTGCTCAGTGTACTGGGTACCAGGCGACTCC < 41bp 0.549977113689067 0.871452937307061 0.26982093 0.8871566 prediction 0.642951647235989 Functional Gain - RRP1 ENSG00000160214 UTR5 Human protein_coding chr21:45209462 chr21:45209463 . . 0 22 hPsi_associated_SNPs_29641 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995712 0.7743132 0 hPsi_site_23365 iPseU_CNN:0.7743132;iRNA_PseU:0 23366 chr16 57694721 57694721 1 + G A CESC 57694720 + 57694700 57694740 41 ACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGCCCCAT ACGCTGGTGGCCCTGGTGGATATGGACAACTATGGCCCCAT < 41bp 0.583082114449777 0.90455365041172 0.46548796 0.6449418 prediction 0.642943071923886 Functional Gain - ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57694720 chr16:57694721 nonsynonymous SNV 0.824 0 22 hPsi_associated_SNPs_29642 0 0 1 0 1 Nucleus 0.438715459798257 0.438585711962952 0.2898836 0 hPsi_site_23366 iPseU_CNN:0.2898836;iRNA_PseU:0 23367 chr1 248202392 248202392 1 + G A LUAD 248202391 + 248202371 248202411 41 ACAGAGGACAAGATTCTGGCTGTTTTCTACACCATCCTCAC ACAGAGGACAAGATTCTGGCTATTTTCTACACCATCCTCAC < 41bp 0.563096938250711 0.884567541118026 0.2971856 0.33759558 prediction 0.642941205734628 Functional Gain - OR2L2 ENSG00000203663 CDS Human protein_coding chr1:248202391 chr1:248202392 nonsynonymous SNV 0.075 0 22 hPsi_associated_SNPs_29643 0 0 0 0 0 exosome 0.43948702574011 0.439862724553974 0 0 hPsi_site_23367 iPseU_CNN:0;iRNA_PseU:0 23368 chr17 41063332 41063332 1 + C A COAD 41063331 + 41063311 41063351 41 CCCATCCCAAGTCGAGCTGGTCTTCTACGTCTTGTCCTTCT CCCATCCCAAGTCGAGCTGGTATTCTACGTCTTGTCCTTCT < 41bp 0.448796709116852 0.821469142226009 0.3719504 0.8330722 prediction 0.642938284452019 Functional Gain - G6PC ENSG00000131482 CDS Human protein_coding chr17:41063331 chr17:41063332 synonymous SNV . 0 22 hPsi_associated_SNPs_29644 0 0 1 0 0 Nucleus 0.438718592995191 0.438718591395131 0.6661444 0 hPsi_site_23368 iPseU_CNN:0.6661444;iRNA_PseU:0 23369 chrX 103359337 103359337 1 + C A UCEC 103359336 + 103359316 103359356 41 CAGACTCGCTTGCAACAGCTTCTTTTAGGCGCTGAGCTGAA CAGACTCGCTTGCAACAGCTTATTTTAGGCGCTGAGCTGAA < 41bp 0.552976984539283 0.874441559864435 0.32764652 0.6153562 prediction 0.642929150650303 Functional Gain - ZCCHC18 ENSG00000166707 CDS Human protein_coding chrX:103359336 chrX:103359337 nonsynonymous SNV 0.143 2 22 hPsi_associated_SNPs_29645 0 0 0 0 0 exosome 0.439960722879357 0.438721193179953 0.2307124 0 hPsi_site_23369 iPseU_CNN:0.2307124;iRNA_PseU:0 23370 chr16 69374142 69374142 1 + G A HNSC 69374141 + 69374121 69374161 41 CAATATTTCCGGGGACAAGCTGGTGTCGCTGGGGACCTGCT CAATATTTCCGGGGACAAGCTAGTGTCGCTGGGGACCTGCT < 41bp 0.399691122563301 0.821462495598542 0.20868835 0.27193528 prediction 0.642924991197084 Functional Gain - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69374141 chr16:69374142 synonymous SNV . 0 22 hPsi_associated_SNPs_29646 0 0 1 0 2 Ribosome 0.438720979959772 0.438718592606629 0 0 hPsi_site_23370 iPseU_CNN:0;iRNA_PseU:0 23371 chr1 156351898 156351898 1 + G A SKCM 156351897 + 156351877 156351917 41 TTCAAAGTCCAAGACACATGTGGAGTCCACAACCTCCATGG TTCAAAGTCCAAGACACATGTAGAGTCCACAACCTCCATGG < 41bp 0.389113879525861 0.821459517805949 0.3008951 0.37895 prediction 0.642919035611897 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156351897 chr1:156351898 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_29647 0 0 1 0 2 Cytosol 0.438724867654588 0.43870538204166 0 0 hPsi_site_23371 iPseU_CNN:0;iRNA_PseU:0 23372 chr19 11474850 11474850 1 + G A PRAD 11474849 + 11474829 11474869 41 TGTCTCAGGAACCCGAGGTCTGCAGGCCGCATTCGACACCG TGTCTCAGGAACCCGAGGTCTACAGGCCGCATTCGACACCG < 41bp 0.39787505237038 0.821458928627933 0.38107038 0.61436254 prediction 0.642917857255865 Functional Gain - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474849 chr19:11474850 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29648 0 0 1 0 2 exosome 0.438718573487809 0.438724460306481 0.22872508 0 hPsi_site_23372 iPseU_CNN:0.22872508;iRNA_PseU:0 23373 chr14 100607562 100607562 1 + C A rs138385143 100607561 + 100607541 100607581 41 TGACATGGCCCTGGATGCCTTCGACTTGGACCGGATGAAGC TGACATGGCCCTGGATGCCTTAGACTTGGACCGGATGAAGC < 41bp 0.466377789449409 0.821455132617171 0.20029408 0.33046192 prediction 0.642910265234342 Functional Gain - EVL ENSG00000196405 CDS Human protein_coding chr14:100607561 chr14:100607562 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_29649 0 0 1 0 2 chromatin 0.438719653245295 0.43871856795294 0 0 hPsi_site_23373 iPseU_CNN:0;iRNA_PseU:0 23374 chr6 142741181 142741181 1 + G T LUAD 142741180 + 142741160 142741200 41 ACATGGGGTTTTGCATTCTTTGCCTGGGGACCCTTAAATAT ACATGGGGTTTTGCATTCTTTTCCTGGGGACCCTTAAATAT < 41bp 0.492048151613659 0.821453773424358 0.33630538 0.49938533 prediction 0.642907546848715 Functional Gain - ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142741180 chr6:142741181 nonsynonymous SNV 0.907 2 22 hPsi_associated_SNPs_29650 0 0 1 0 1 Ribosome 0.438716189216193 0.438718604669209 0 0 hPsi_site_23374 iPseU_CNN:0;iRNA_PseU:0 23375 chr1 155154441 155154441 1 + G A BLCA 155154440 + 155154420 155154460 41 CTGCCCCTGCTGCTGGCTGCTGACCGGCTGCTGACCGGCTG CTGCCCCTGCTGCTGGCTGCTAACCGGCTGCTGACCGGCTG < 41bp 0.420165513275531 0.82145301944409 0.18646115 0.33752936 prediction 0.642906038888181 Functional Gain - TRIM46 ENSG00000163462 CDS Human protein_coding chr1:155154440 chr1:155154441 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_29651 0 0 0 0 0 nucleolus 0.438719244127157 0.438718589578422 0 0 hPsi_site_23375 iPseU_CNN:0;iRNA_PseU:0 23376 chrX 110928317 110928317 1 + C A LIHC 110928316 + 110928296 110928336 41 ACACAAAGAGGGTCATCTCTTCTATTGTACCTGCAGGTATG ACACAAAGAGGGTCATCTCTTATATTGTACCTGCAGGTATG < 41bp 0.483048405599661 0.821449218887278 0.44870347 0.40940017 prediction 0.642898437774556 Functional Gain - ALG13 ENSG00000101901 CDS Human protein_coding chrX:110928316 chrX:110928317 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_29652 0 0 1 0 1 Cytosol 0.438718596036425 0.43871875604085 0 0 hPsi_site_23376 iPseU_CNN:0;iRNA_PseU:0 23377 chr2 135848633 135848633 1 + C A UCEC 135848632 + 135848612 135848652 41 TTCCTTTGCTGACTTCAAGTTCTCAGTCACTCATCATTATC TTCCTTTGCTGACTTCAAGTTATCAGTCACTCATCATTATC < 41bp 0.466154491784661 0.821447034094731 0.20647871 0.33977282 prediction 0.642894068189463 Functional Gain - RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135848632 chr2:135848633 nonsynonymous SNV 0.991 4 22 hPsi_associated_SNPs_29653 0 0 1 3 0 Cytosol 0.438665483708335 0.43871258888427 0 0 hPsi_site_23377 iPseU_CNN:0;iRNA_PseU:0 23378 chr20 31671196 31671196 1 + G A CESC 31671195 + 31671175 31671215 41 GTTGGTGATATTCCCTACAATGACTTCCATGTCCGAGGACC GTTGGTGATATTCCCTACAATAACTTCCATGTCCGAGGACC < 41bp 0.414164905926103 0.821442482130801 0.20292097 0.27035433 prediction 0.642884964261602 Functional Gain - BPIFB4 ENSG00000186191 CDS Human protein_coding chr20:31671195 chr20:31671196 nonsynonymous SNV 0.570 1 22 hPsi_associated_SNPs_29654 0 0 0 0 1 exosome 0.438665314702673 0.438990436505783 0 0 hPsi_site_23378 iPseU_CNN:0;iRNA_PseU:0 23379 chr11 6129278 6129278 1 + C A UCEC 6129277 + 6129257 6129297 41 CATGCCCAAGATCCTGGCCATCTTCTGGTTTGATGCCAAGG CATGCCCAAGATCCTGGCCATATTCTGGTTTGATGCCAAGG < 41bp 0.470848634936437 0.821438332275703 0.4491978 0.35594967 prediction 0.642876664551407 Functional Gain - OR56B4 ENSG00000180919 CDS Human protein_coding chr11:6129277 chr11:6129278 synonymous SNV . 0 22 hPsi_associated_SNPs_29655 0 0 0 0 0 unknown 0.438722923995465 0.438717535980705 0 0 hPsi_site_23379 iPseU_CNN:0;iRNA_PseU:0 23380 chr16 28990592 28990592 1 + G A CESC 28990591 + 28990571 28990611 41 GGCCGACCAGCGGAGCCGGATGCTCAGCATCTTCTACTTTG GGCCGACCAGCGGAGCCGGATACTCAGCATCTTCTACTTTG < 41bp 0.398571338349442 0.821437516506157 0.2993872 0.69682026 prediction 0.642875033012314 Functional Gain - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28990591 chr16:28990592 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29656 0 0 1 0 1 chromatin 0.438718592995102 0.4387185941767 0.39364052 0 hPsi_site_23380 iPseU_CNN:0.39364052;iRNA_PseU:0 Multiple complex diseases 23381 chr6 27115271 27115271 1 + G A CESC 27115270 + 27115250 27115290 41 GTGCTGCTGCCTAAGAAGACTGAGAGCCACCATAAGGCCAA GTGCTGCTGCCTAAGAAGACTAAGAGCCACCATAAGGCCAA < 41bp 0.557947921010991 0.879385382472389 0.31415942 0.6189406 prediction 0.642874922922795 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115270 chr6:27115271 nonsynonymous SNV 0.903 3 22 hPsi_associated_SNPs_29657 0 0 1 0 0 cytosol 0.438718581581504 0.438718660757563 0.2378812 0 hPsi_site_23381 iPseU_CNN:0.2378812;iRNA_PseU:0 23382 chr6 31525473 31525473 1 + G A LIHC 31525472 + 31525452 31525492 41 ATGGGAATAAAGAATAAGGATGGGGAGACCCCTGGCCAAAT ATGGGAATAAAGAATAAGGATAGGGAGACCCCTGGCCAAAT < 41bp 0.540627646036955 0.86206261572384 0.3005175 0.48576322 prediction 0.64286993937377 Functional Gain - NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31525472 chr6:31525473 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29658 0 0 1 0 1 cytosol 0.438718593003474 0.438718592995102 0 0 hPsi_site_23382 iPseU_CNN:0;iRNA_PseU:0 23383 chr22 21350351 21350351 1 + G A STAD 21350350 + 21350330 21350370 41 CAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACG CAGGCAGGCCTTCGAGTCCATACTGCGCTACATCTACTACG < 41bp 0.397678152497588 0.821432697865871 0.28509623 0.6583438 prediction 0.642865395731742 Functional Gain - LZTR1 ENSG00000099949 CDS Human protein_coding chr22:21350350 chr22:21350351 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29659 0 0 0 0 1 Nucleus 0.438718498036095 0.438718535615008 0.3166876 0 hPsi_site_23383 iPseU_CNN:0.3166876;iRNA_PseU:0 23384 chr3 127327830 127327830 1 + C A LUAD 127327829 + 127327809 127327849 41 CGATGAAGATGTGAAGATGATCACTAGCCTCTCCAAGGATC CGATGAAGATGTGAAGATGATAACTAGCCTCTCCAAGGATC < 41bp 0.555129397879949 0.876560369075896 0.49574554 0.66269344 prediction 0.642861942391894 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127327829 chr3:127327830 synonymous SNV . 0 22 hPsi_associated_SNPs_29660 0 0 1 0 1 Cytosol 0.438727720303461 0.438732860467776 0.32538688 0 hPsi_site_23384 iPseU_CNN:0.32538688;iRNA_PseU:0 23385 chr1 92442855 92442855 1 + G A LGG 92442854 + 92442834 92442874 41 GCAAAGAAACATTTTTCATATGCATGGCCCTTTTATAATCC GCAAAGAAACATTTTTCATATACATGGCCCTTTTATAATCC < 41bp 0.566622657930548 0.888047846087105 0.36483857 0.7280724 prediction 0.642850376313113 Functional Gain - BRDT ENSG00000137948 CDS Human protein_coding chr1:92442854 chr1:92442855 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_29661 0 0 0 0 1 exosome 0.438718592994403 0.438718592992299 0.4561448 0 hPsi_site_23385 iPseU_CNN:0.4561448;iRNA_PseU:0 23386 chr12 96900732 96900732 1 + G A UCEC 96900731 + 96900711 96900751 41 TGCTTTGAGTGGCAAAAATATGTGCAACTACCAGCTGGTCT TGCTTTGAGTGGCAAAAATATATGCAACTACCAGCTGGTCT < 41bp 0.433842243750726 0.821422890865075 0.2940827 0.34532234 prediction 0.642845781730149 Functional Gain - CFAP54 ENSG00000188596 CDS Human protein_coding chr12:96900731 chr12:96900732 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_29662 0 0 0 0 1 exosome 0.43736178346913 0.435601978523613 0 0 hPsi_site_23386 iPseU_CNN:0;iRNA_PseU:0 23387 chr10 76936171 76936171 1 + G A SARC 76936170 + 76936150 76936190 41 ACCAAGAAGCTGGAATTTCTTGCACACTTTATCCTGGGTTC ACCAAGAAGCTGGAATTTCTTACACACTTTATCCTGGGTTC < 41bp 0.562986205097086 0.884406988015074 0.19347891 0.33961087 prediction 0.642841565835976 Functional Gain - SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76936170 chr10:76936171 synonymous SNV . 0 22 hPsi_associated_SNPs_29663 0 0 1 16 1 chromatin 0.438685647328194 0.437811495250869 0 0 hPsi_site_23387 iPseU_CNN:0;iRNA_PseU:0 23388 chr1 152659500 152659500 1 + G A COAD 152659499 + 152659479 152659519 41 GGCTGCTGTGGTCCCAGCTCTGGGGGCTGCTGCAACTCTGG GGCTGCTGTGGTCCCAGCTCTAGGGGCTGCTGCAACTCTGG < 41bp 0.578574844683296 0.899984597560613 0.26664543 0.46251065 prediction 0.642819505754634 Functional Gain - LCE2B ENSG00000159455 CDS Human protein_coding chr1:152659499 chr1:152659500 nonsynonymous SNV 0.590 1 22 hPsi_associated_SNPs_29664 0 0 0 0 0 unknown 0.43871831404488 0.438662562317075 0 0 hPsi_site_23388 iPseU_CNN:0;iRNA_PseU:0 23389 chr1 171753063 171753063 1 + G A UCEC 171753062 + 171753042 171753082 41 ACGCAGATGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTT ACGCAGATGGAGTTTCCTGATACCTCGTTCCAGGTGGTGTT < 41bp 0.585670177525769 0.907079346093422 0.23347646 0.484656 prediction 0.642818337135307 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753062 chr1:171753063 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_29665 0 0 1 0 0 Ribosome 0.438714225093911 0.438718374740548 0 0 hPsi_site_23389 iPseU_CNN:0;iRNA_PseU:0 23390 chr17 38348898 38348898 1 + C A HNSC 38348897 + 38348877 38348917 41 AAAGCTACCGAGAAGTGATCTCCAAAATGAAGCCCCCTGTG AAAGCTACCGAGAAGTGATCTACAAAATGAAGCCCCCTGTG < 41bp 0.442571119019813 0.821404140026812 0.29220748 0.31637254 prediction 0.642808280053623 Functional Gain - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38348897 chr17:38348898 nonsynonymous SNV 0.629 2 22 hPsi_associated_SNPs_29666 0 0 0 0 2 chromatin 0.43871859322021 0.438718591067537 0 0 hPsi_site_23390 iPseU_CNN:0;iRNA_PseU:0 23391 chr9 131670949 131670949 1 + C A UCEC 131670948 + 131670928 131670968 41 GCGGGCGCTGCACATCAAGTTCACCGACATCAAGGAGATCC GCGGGCGCTGCACATCAAGTTAACCGACATCAAGGAGATCC < 41bp 0.554194842455933 0.875595257525641 0.23617062 0.6782766 prediction 0.642800830139417 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131670948 chr9:131670949 nonsynonymous SNV 0.996 3 22 hPsi_associated_SNPs_29667 0 0 0 0 0 Endoplasmic reticulum 0.442416734014147 0.438717836136942 0.3565532 0 hPsi_site_23391 iPseU_CNN:0.3565532;iRNA_PseU:0 23392 chr19 42791505 42791505 1 + G A rs200317945 42791504 + 42791484 42791524 41 CATGTCTCCTGAGATCCAGTTGCCTCTACCGCCCGGAAAAC CATGTCTCCTGAGATCCAGTTACCTCTACCGCCCGGAAAAC < 41bp 0.585819496739418 0.907205366218017 0.24253786 0.61479706 prediction 0.642771738957199 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42791504 chr19:42791505 synonymous SNV . 0 22 hPsi_associated_SNPs_29668 0 0 1 0 2 Cytosol 0.438307960691698 0.438672003205533 0.22959412 0 hPsi_site_23392 iPseU_CNN:0.22959412;iRNA_PseU:0 23393 chr1 182808454 182808454 1 + G A rs556554433 182808453 + 182808433 182808473 41 CTGCGCATGCGTACGCTCGCTGGCCCCGCCCCCTAGCGCCG CTGCGCATGCGTACGCTCGCTAGCCCCGCCCCCTAGCGCCG < 41bp 0.444170771469502 0.821385426380968 0.32872602 0.89646727 prediction 0.642770852761935 Functional Gain - DHX9 ENSG00000135829 upstream Human protein_coding chr1:182808453 chr1:182808454 . . 0 22 hPsi_associated_SNPs_29669 0 0 0 0 0 Cytosol 0.438681477543429 0.438709295021321 0.79293454 0 hPsi_site_23393 iPseU_CNN:0.79293454;iRNA_PseU:0 23394 chr14 24649088 24649088 1 + G A BRCA 24649087 + 24649067 24649107 41 CTCAGCCCCCGCAGGATGGCTGCCCGGGTCTTCTACCTGCT CTCAGCCCCCGCAGGATGGCTACCCGGGTCTTCTACCTGCT < 41bp 0.583496350406091 0.904873777542443 0.21140638 0.30205175 prediction 0.642754854272704 Functional Gain - REC8 ENSG00000100918 CDS Human protein_coding chr14:24649087 chr14:24649088 nonsynonymous SNV 0.412 0 22 hPsi_associated_SNPs_29670 0 0 1 0 2 chromatin 0.43871859456498 0.438721446341536 0 0 hPsi_site_23394 iPseU_CNN:0;iRNA_PseU:0 23395 chr15 50774185 50774185 1 + C A STAD 50774184 + 50774164 50774204 41 GAAGATAGGGGGAAAAGGTGTCCAACCCCAGAAATACAGAA GAAGATAGGGGGAAAAGGTGTACAACCCCAGAAATACAGAA < 41bp 0.460735959238984 0.821371460292523 0.67080116 0.8606936 prediction 0.642742920585046 Functional Gain - USP8 ENSG00000138592 CDS Human protein_coding chr15:50774184 chr15:50774185 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_29671 0 0 1 0 0 Ribosome 0.438718592995102 0.438718592995102 0.37978488 0 hPsi_site_23395 iPseU_CNN:0.37978488;iRNA_PseU:0 23396 chr3 126382316 126382316 1 + G A SKCM 126382315 + 126382295 126382335 41 GTCTGGGCTTGTGCAGGTGGTGGATGCAGAGACTGGCAAGG GTCTGGGCTTGTGCAGGTGGTAGATGCAGAGACTGGCAAGG < 41bp 0.436703162972799 0.821360327769217 0.3273573 0.5924028 prediction 0.642720655538435 Functional Gain - NUP210P1 ENSG00000198284 ncRNA_exonic Human transcribed_processed_pseudogene chr3:126382315 chr3:126382316 . . 0 22 hPsi_associated_SNPs_29672 0 0 0 0 1 unknown 0.436977075220579 0.43869950588494 0.1848056 0 hPsi_site_23396 iPseU_CNN:0.1848056;iRNA_PseU:0 23397 chr10 89653829 89653829 1 + G A CESC 89653828 + 89653808 89653848 41 GGATTTCCTGCAGAAAGACTTGAAGGCGTATACAGGAACAA GGATTTCCTGCAGAAAGACTTAAAGGCGTATACAGGAACAA < 41bp 0.572799699878232 0.894158439296195 0.2506666 0.30698645 prediction 0.642717478835926 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89653828 chr10:89653829 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29673 0 0 0 0 2 Ribosome 0.438728820101787 0.438592154620074 0 0 hPsi_site_23397 iPseU_CNN:0;iRNA_PseU:0 23398 chr19 19165082 19165082 1 + G A rs10414859 19165081 + 19165061 19165101 41 CCTGAGCATTCTGGTGTCCCTGCTAGCCGACTGCAATGACC CCTGAGCATTCTGGTGTCCCTACTAGCCGACTGCAATGACC < 41bp 0.582577032451461 0.903935051027803 0.2577685 0.46502775 prediction 0.642716037152685 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19165081 chr19:19165082 synonymous SNV . 0 22 hPsi_associated_SNPs_29674 0 0 1 0 1 Ribosome 0.43863279928392 0.439096994483321 0 0 hPsi_site_23398 iPseU_CNN:0;iRNA_PseU:0 23399 chr5 149919718 149919718 1 + G T LUSC 149919717 + 149919697 149919737 41 GTACACCTTCAAGCACCTGGTGCGCTTCCTGCACTCCTGGA GTACACCTTCAAGCACCTGGTTCGCTTCCTGCACTCCTGGA < 41bp 0.531392162548633 0.852740509934352 0.3016343 0.7157672 prediction 0.642696694771438 Functional Gain - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149919717 chr5:149919718 synonymous SNV . 0 22 hPsi_associated_SNPs_29675 0 0 1 0 1 Cytosol 0.438719445922889 0.438797999141124 0.4315344 0 hPsi_site_23399 iPseU_CNN:0.4315344;iRNA_PseU:0 23400 chr12 55794504 55794504 1 + C A UCEC 55794503 + 55794483 55794523 41 GTATTTCTTCCTCAGGAATTTCTCTTTCTTAGAAATTTCAT GTATTTCTTCCTCAGGAATTTATCTTTCTTAGAAATTTCAT < 41bp 0.49685101839104 0.821348144159217 0.20879662 0.29645425 prediction 0.642696288318434 Functional Gain - OR6C65 ENSG00000205328 CDS Human protein_coding chr12:55794503 chr12:55794504 nonsynonymous SNV 0.073 1 22 hPsi_associated_SNPs_29676 0 0 0 0 0 unknown 0.438718480238801 0.438718593112256 0 0 hPsi_site_23400 iPseU_CNN:0;iRNA_PseU:0 23401 chrX 79279646 79279646 1 + G A rs145208457 79279645 + 79279625 79279665 41 GGCCATCGATGTGGTGCCGGTGGATTCCAAACGCTATAGGT GGCCATCGATGTGGTGCCGGTAGATTCCAAACGCTATAGGT < 41bp 0.401358375494102 0.821331913207097 0.61594075 0.9266519 prediction 0.642663826414195 Functional Gain - TBX22 ENSG00000122145 CDS Human protein_coding chrX:79279645 chrX:79279646 synonymous SNV . 0 22 hPsi_associated_SNPs_29677 0 0 0 0 2 unknown 0.438718590555017 0.438718967317749 0.6214223 0 hPsi_site_23401 iPseU_CNN:0.6214223;iRNA_PseU:0 23402 chr1 173795914 173795914 1 + C A BLCA 173795913 + 173795893 173795933 41 GTCACCTTGTGTGGATGGATTCAGTACCGAAGGTAAATTGA GTCACCTTGTGTGGATGGATTAAGTACCGAAGGTAAATTGA < 41bp 0.464461732185035 0.821331306383467 0.14762932 0.35108507 prediction 0.642662612766935 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173795913 chr1:173795914 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29678 0 0 1 0 2 chromatin 0.438718593065039 0.438718592995058 0 0 hPsi_site_23402 iPseU_CNN:0;iRNA_PseU:0 23403 chr1 160784424 160784424 1 + C A UCEC 160784423 + 160784403 160784443 41 TTACAAGAACAGGGTGTGGGTCTCCAGCCAGGACTGCTCCC TTACAAGAACAGGGTGTGGGTATCCAGCCAGGACTGCTCCC < 41bp 0.55086281096037 0.872194030360807 0.21400473 0.28539598 prediction 0.642662438800875 Functional Gain - LY9 ENSG00000122224 CDS Human protein_coding chr1:160784423 chr1:160784424 synonymous SNV . 0 22 hPsi_associated_SNPs_29679 0 0 0 0 0 exosome 0.43871867829086 0.438719938960806 0 0 hPsi_site_23403 iPseU_CNN:0;iRNA_PseU:0 23404 chr11 113264440 113264440 1 + G T LUAD 113264439 + 113264419 113264459 41 GCACAGCATTAAGCCGCCTCTGCTCCACCTGGACCTCAAGC GCACAGCATTAAGCCGCCTCTTCTCCACCTGGACCTCAAGC < 41bp 0.495605730594905 0.821318711805478 0.27103913 0.37471634 prediction 0.642637423610956 Functional Gain - ANKK1 ENSG00000170209 CDS Human protein_coding chr11:113264439 chr11:113264440 synonymous SNV . 0 22 hPsi_associated_SNPs_29680 0 0 0 0 1 exosome 0.4387030306864 0.438550436367283 0 0 hPsi_site_23404 iPseU_CNN:0;iRNA_PseU:0 23405 chr4 39482636 39482636 1 + C A COAD 39482635 + 39482615 39482655 41 TCATTTTAATCGTGATGGATTCTTGATAGTTTCAAGTAGCT TCATTTTAATCGTGATGGATTATTGATAGTTTCAAGTAGCT < 41bp 0.515674869389607 0.836991390599159 0.21414244 0.26043534 prediction 0.642633042419103 Functional Gain - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482635 chr4:39482636 . . 0 22 hPsi_associated_SNPs_29681 0 0 0 1 0 unknown 0.43865516099877 0.438524337612415 0 0 hPsi_site_23405 iPseU_CNN:0;iRNA_PseU:0 23406 chr19 16980441 16980441 1 + G T LUSC 16980440 + 16980420 16980460 41 GGGCACCATCCACCAGCTGCTGCACCAGTTCGTGCCCAGCC GGGCACCATCCACCAGCTGCTTCACCAGTTCGTGCCCAGCC < 41bp 0.52817415159816 0.849490088055951 0.27351576 0.2635566 prediction 0.642631872915582 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16980440 chr19:16980441 synonymous SNV . 0 22 hPsi_associated_SNPs_29682 0 0 0 0 0 Cytosol 0.438722270822883 0.441833260561706 0 0 hPsi_site_23406 iPseU_CNN:0;iRNA_PseU:0 23407 chr2 58386502 58386502 1 + C T UCEC 58386503 - 58386483 58386523 41 CTTGAGACTCTTGATATTTCTGTCTTCTCCTTGTGCTTTCC CTTGAGACTCTTGATATTTCTATCTTCTCCTTGTGCTTTCC < 41bp 0.533757486249914 0.855070443418757 0.25417882 0.3303574 prediction 0.642625914337686 Functional Gain - VRK2 ENSG00000028116 CDS Human protein_coding chr2:58386503 chr2:58386502 stopgain 0.008 0 22 hPsi_associated_SNPs_29683 0 0 1 0 0 Cytosol 0.438712400512289 0.43871853266991 0 0 hPsi_site_23407 iPseU_CNN:0;iRNA_PseU:0 23408 chrX 140985195 140985195 1 + C A UCEC 140985194 + 140985174 140985214 41 CCCAAGAACTGTCTCCTGATTCTTATTCTCAGTATGATCTT CCCAAGAACTGTCTCCTGATTATTATTCTCAGTATGATCTT < 41bp 0.540843120830572 0.862154679125412 0.29106542 0.34878698 prediction 0.642623116589681 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140985194 chrX:140985195 nonsynonymous SNV 0.016 0 22 hPsi_associated_SNPs_29684 0 0 0 0 1 exosome 0.438718612675347 0.438718593207 0 0 hPsi_site_23408 iPseU_CNN:0;iRNA_PseU:0 23409 chr10 95658382 95658382 1 + C A GBM 95658381 + 95658361 95658401 41 GCTTGTTTTACACATTATTGTCTGCCTTCCTTTTCTCAGTG GCTTGTTTTACACATTATTGTATGCCTTCCTTTTCTCAGTG < 41bp 0.451687645832136 0.821303357179698 0.3155814 0.6888005 prediction 0.642606714359397 Functional Gain - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95658381 chr10:95658382 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29685 0 0 1 0 2 exosome 0.43874483218907 0.438868132840687 0.377601 0 hPsi_site_23409 iPseU_CNN:0.377601;iRNA_PseU:0 23410 chr5 65054447 65054447 1 + C A UCEC 65054446 + 65054426 65054466 41 CGTTAGGAAGAGAAGTGATGTCTCCTCTTCAGGCAATGTCT CGTTAGGAAGAGAAGTGATGTATCCTCTTCAGGCAATGTCT < 41bp 0.464161586470535 0.821295609141509 0.2728684 0.47796658 prediction 0.642591218283019 Functional Gain - NLN ENSG00000123213 CDS Human protein_coding chr5:65054446 chr5:65054447 nonsynonymous SNV 0.966 2 22 hPsi_associated_SNPs_29686 0 0 1 0 0 Ribosome 0.438732538045784 0.438288211328172 0 0 hPsi_site_23410 iPseU_CNN:0;iRNA_PseU:0 23411 chr12 108051355 108051355 1 + G A SKCM 108051354 + 108051334 108051374 41 AAAAACATGATGGTCCTCATTGAAAACGAAGCATTCAAGCA AAAAACATGATGGTCCTCATTAAAAACGAAGCATTCAAGCA < 41bp 0.422320623865999 0.821293882019901 0.27347273 0.2898115 prediction 0.642587764039803 Functional Gain - BTBD11 ENSG00000151136 CDS Human protein_coding chr12:108051354 chr12:108051355 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29687 0 0 0 0 1 cytosol 0.438717523215839 0.438766087125278 0 0 hPsi_site_23411 iPseU_CNN:0;iRNA_PseU:0 23412 chr13 114290425 114290425 1 + G A UCEC 114290424 + 114290404 114290444 41 GCAAGAAGACGGTCATCGACTGCAGCATCTCCAATGACAAG GCAAGAAGACGGTCATCGACTACAGCATCTCCAATGACAAG < 41bp 0.395716555323496 0.8212852587443 0.25736028 0.45630047 prediction 0.6425705174886 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290424 chr13:114290425 nonsynonymous SNV 0.958 4 22 hPsi_associated_SNPs_29688 0 0 1 0 1 Cytosol 0.438063675331738 0.438790671367254 0 0 hPsi_site_23412 iPseU_CNN:0;iRNA_PseU:0 23413 chr9 125797387 125797387 1 + G A STAD 125797386 + 125797366 125797406 41 ATGGAGATGTGTTTCAGTGGTGTGCGGAGTCCTGGCACACC ATGGAGATGTGTTTCAGTGGTATGCGGAGTCCTGGCACACC < 41bp 0.415343482382288 0.82128318662678 0.25743914 0.6899123 prediction 0.64256637325356 Functional Gain - GPR21 ENSG00000188394 CDS Human protein_coding chr9:125797386 chr9:125797387 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29689 0 0 1 0 0 exosome 0.438721560078606 0.4387176441921 0.3798246 0 hPsi_site_23413 iPseU_CNN:0.3798246;iRNA_PseU:0 23414 chr3 97868502 97868502 1 + G A GBM 97868501 + 97868481 97868521 41 CTTCTTAGCTAAGAGTAAGATGATATCTCTCTCTGAATGCA CTTCTTAGCTAAGAGTAAGATAATATCTCTCTCTGAATGCA < 41bp 0.551196479822677 0.872477758554289 0.20200223 0.26930702 prediction 0.642562557463223 Functional Gain - OR5H14 ENSG00000236032 CDS Human protein_coding chr3:97868501 chr3:97868502 nonsynonymous SNV 0.037 0 22 hPsi_associated_SNPs_29690 0 0 0 0 0 unknown 0.438719284343599 0.438718864495496 0 0 hPsi_site_23414 iPseU_CNN:0;iRNA_PseU:0 23415 chr12 57865647 57865647 1 + C A UCEC 57865646 + 57865626 57865666 41 AACCCCCTGGACTCTCTTGATCTTGACAACACTCAGCTGGA AACCCCCTGGACTCTCTTGATATTGACAACACTCAGCTGGA < 41bp 0.544574565558575 0.865855702226191 0.26018986 0.5154788 prediction 0.642562273335233 Functional Gain - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57865646 chr12:57865647 nonsynonymous SNV 0.999 3 22 hPsi_associated_SNPs_29691 0 0 0 0 0 nucleoplasm 0.438718571649913 0.438717758657508 0.0309576 0 hPsi_site_23415 iPseU_CNN:0.0309576;iRNA_PseU:0 23416 chr19 42840214 42840214 1 + C A CESC 42840213 + 42840193 42840233 41 GGGCAGGGGCCACTGGGAGCTCCTGGCACCACCTGCCTCCA GGGCAGGGGCCACTGGGAGCTACTGGCACCACCTGCCTCCA < 41bp 0.528626654314317 0.84989796729462 0.1725393 0.58232 prediction 0.642542625960605 Functional Gain - MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42840213 chr19:42840214 synonymous SNV . 0 22 hPsi_associated_SNPs_29692 0 0 0 0 0 Endoplasmic reticulum 0.438718592988615 0.438717829219802 0.16464 0 hPsi_site_23416 iPseU_CNN:0.16464;iRNA_PseU:0 23417 chr11 70052566 70052566 1 + C A HNSC 70052565 + 70052545 70052585 41 GGAACTCAGACGCATCTACCTCCGAAGCGTCCTGATGGGCC GGAACTCAGACGCATCTACCTACGAAGCGTCCTGATGGGCC < 41bp 0.530693956021328 0.851964697178671 0.2585714 0.6652565 prediction 0.642541482314687 Functional Gain - FADD ENSG00000168040 CDS Human protein_coding chr11:70052565 chr11:70052566 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_29693 0 0 1 0 0 Ribosome 0.438718681580677 0.438718592981547 0.330513 0 hPsi_site_23417 iPseU_CNN:0.330513;iRNA_PseU:0 23418 chr11 66813321 66813321 1 + C A COAD 66813320 + 66813300 66813340 41 GGTGTTCAACGAAGCCATGATCTTCTCGGTGCCAGCCATTG GGTGTTCAACGAAGCCATGATATTCTCGGTGCCAGCCATTG < 41bp 0.54623849179832 0.867504596559974 0.26227286 0.41772482 prediction 0.642532209523307 Functional Gain - SYT12 ENSG00000173227 CDS Human protein_coding chr11:66813320 chr11:66813321 synonymous SNV . 0 22 hPsi_associated_SNPs_29694 0 0 0 0 1 nucleolus 0.438701128207063 0.438715964799228 0 0 hPsi_site_23418 iPseU_CNN:0;iRNA_PseU:0 23419 chr14 60591898 60591898 1 + G A PAAD 60591897 + 60591877 60591917 41 GAGAGTTTACGGTGGTGTTTTGCCTTGGTCTGTTGCTTTGG GAGAGTTTACGGTGGTGTTTTACCTTGGTCTGTTGCTTTGG < 41bp 0.577186986866293 0.898448830033439 0.27012372 0.3119877 prediction 0.642523686334292 Functional Gain - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591897 chr14:60591898 synonymous SNV . 0 22 hPsi_associated_SNPs_29695 0 0 1 0 1 Endoplasmic reticulum 0.438546322649808 0.430425273231649 0 0 hPsi_site_23419 iPseU_CNN:0;iRNA_PseU:0 23420 chr5 140590262 140590262 1 + G A LUSC 140590261 + 140590241 140590281 41 AAGGTGGTGGCGGTGGACGGTGACTCGGGCCAGAACGCCTG AAGGTGGTGGCGGTGGACGGTAACTCGGGCCAGAACGCCTG < 41bp 0.414027221560092 0.821257613604343 0.2935661 0.88256335 prediction 0.642515227208687 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140590261 chr5:140590262 nonsynonymous SNV 0.936 3 22 hPsi_associated_SNPs_29696 0 0 0 0 0 exosome 0.438716400852026 0.438718593506886 0.7651267 0 hPsi_site_23420 iPseU_CNN:0.7651267;iRNA_PseU:0 23421 chr1 201965372 201965372 1 + G A BLCA 201965371 + 201965351 201965391 41 GCAACAGGAGAGAAGCTTTTTGGACCTTATGTTTGGGGAAG GCAACAGGAGAGAAGCTTTTTAGACCTTATGTTTGGGGAAG < 41bp 0.399913498240194 0.821257048675308 0.26310056 0.3373321 prediction 0.642514097350615 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201965371 chr1:201965372 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_29697 0 0 1 0 2 Ribosome 0.438718592995102 0.438718597560753 0 0 hPsi_site_23421 iPseU_CNN:0;iRNA_PseU:0 23422 chr5 314578 314578 1 + G A OV 314577 + 314557 314597 41 ACGACACGGATCAGGACGGCTGGATTCAGGTGTCGTACGAA ACGACACGGATCAGGACGGCTAGATTCAGGTGTCGTACGAA < 41bp 0.427901834927972 0.821255536660699 0.20236069 0.4461737 prediction 0.642511073321398 Functional Gain - PDCD6 ENSG00000249915 CDS Human protein_coding chr5:314577 chr5:314578 stopgain 1.000 0 22 hPsi_associated_SNPs_29698 0 0 1 0 1 Ribosome 0.438718284862 0.438718593555429 0 0 hPsi_site_23422 iPseU_CNN:0;iRNA_PseU:0 23423 chr11 65746121 65746121 1 + G T BRCA 65746120 + 65746100 65746140 41 TGGCAAGGGCTCAGGCAAGATGAAGACAGAGCGGCGGATGA TGGCAAGGGCTCAGGCAAGATTAAGACAGAGCGGCGGATGA < 41bp 0.51463549437123 0.835890547358556 0.3090243 0.5293724 prediction 0.642510105974652 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65746120 chr11:65746121 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29699 0 0 1 0 2 Cytosol 0.438692007560441 0.438718866018159 0.0587447999999999 0 hPsi_site_23423 iPseU_CNN:0.0587447999999999;iRNA_PseU:0 23424 chr1 28206240 28206240 1 + G A STAD 28206239 + 28206219 28206259 41 AACTCAGAGCTCCAAGCAGCTGCCCACTTGCTTCATGTCGA AACTCAGAGCTCCAAGCAGCTACCCACTTGCTTCATGTCGA < 41bp 0.400482471102189 0.821254046536498 0.17448825 0.66737545 prediction 0.642508093072996 Functional Gain - THEMIS2 ENSG00000130775 CDS Human protein_coding chr1:28206239 chr1:28206240 synonymous SNV . 0 22 hPsi_associated_SNPs_29700 0 0 0 0 1 chromatin 0.438718831370436 0.43871986250326 0.3347509 0 hPsi_site_23424 iPseU_CNN:0.3347509;iRNA_PseU:0 23425 chr12 18891723 18891723 1 + G A SKCM 18891722 + 18891702 18891742 41 ACGGACTTTGGAAATCTAAATGGATTTTCCAAGTTAACCCA ACGGACTTTGGAAATCTAAATAGATTTTCCAAGTTAACCCA < 41bp 0.434673707080219 0.821251733501308 0.21746686 0.29462063 prediction 0.642503467002615 Functional Gain - CAPZA3 ENSG00000177938 CDS Human protein_coding chr12:18891722 chr12:18891723 stopgain 0.995 1 22 hPsi_associated_SNPs_29701 0 0 0 0 0 unknown 0.438720521844646 0.438973940199853 0 0 hPsi_site_23425 iPseU_CNN:0;iRNA_PseU:0 23426 chr11 129724602 129724602 1 + G A LUAD 129724601 + 129724581 129724621 41 GAATTGGCAGCACAGCACCATGTACCTATTCTTTGCAGTCT GAATTGGCAGCACAGCACCATATACCTATTCTTTGCAGTCT < 41bp 0.394447868866057 0.821250073483646 0.20067713 0.2736587 prediction 0.642500146967293 Functional Gain - TMEM45B ENSG00000151715 CDS Human protein_coding chr11:129724601 chr11:129724602 nonsynonymous SNV 0.994 2 22 hPsi_associated_SNPs_29702 0 0 1 0 1 Ribosome 0.432119411187838 0.435905495790268 0 0 hPsi_site_23426 iPseU_CNN:0;iRNA_PseU:0 23427 chr1 150485734 150485734 1 + C A UCEC 150485733 + 150485713 150485753 41 AAATTAACCTTCATCAATGATCTGTGTGGTCCCCGACGTAA AAATTAACCTTCATCAATGATATGTGTGGTCCCCGACGTAA < 41bp 0.462959266593274 0.821249897861293 0.43020785 0.38494763 prediction 0.642499795722586 Functional Gain - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150485733 chr1:150485734 nonsynonymous SNV 0.350 3 22 hPsi_associated_SNPs_29703 0 0 1 0 1 Endoplasmic reticulum 0.438421021448344 0.438480218274757 0 0 hPsi_site_23427 iPseU_CNN:0;iRNA_PseU:0 23428 chr7 107114811 107114811 1 + C A SKCM 107114810 + 107114790 107114830 41 TATTCCTCTAACTATAGTTATCCTTCTGCTTTCACTGGAGA TATTCCTCTAACTATAGTTATACTTCTGCTTTCACTGGAGA < 41bp 0.472025716193744 0.821245602274447 0.284807 0.5124333 prediction 0.642491204548893 Functional Gain - GPR22 ENSG00000172209 CDS Human protein_coding chr7:107114810 chr7:107114811 synonymous SNV . 0 22 hPsi_associated_SNPs_29704 0 0 0 0 0 nucleus 0.438719886944416 0.439484620840823 0.0248666 0 hPsi_site_23428 iPseU_CNN:0.0248666;iRNA_PseU:0 23429 chr14 65208506 65208506 1 + C A rs139893245 65208505 + 65208485 65208525 41 AAGAAACTCCATCTCCAGGTTCAACAGCCTTCCCCGGCCAG AAGAAACTCCATCTCCAGGTTAAACAGCCTTCCCCGGCCAG < 41bp 0.552661685670457 0.873906078990414 0.7220217 0.7934481 prediction 0.642488786639913 Functional Gain - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65208505 chr14:65208506 nonsynonymous SNV 0.945 0 22 hPsi_associated_SNPs_29705 0 0 0 0 0 Nucleus 0.438718592447333 0.438718592993546 0.1428528 0 hPsi_site_23429 iPseU_CNN:0.1428528;iRNA_PseU:0 23430 chr11 56954951 56954951 1 + C A STAD 56954950 + 56954930 56954970 41 GGCCAGTGAAGAGGAAGAGATCTGACATGCCTGCCTCTCAT GGCCAGTGAAGAGGAAGAGATATGACATGCCTGCCTCTCAT < 41bp 0.53488215236089 0.856126447264069 0.33666438 0.38590267 prediction 0.642488589806357 Functional Gain - LRRC55 ENSG00000183908 CDS Human protein_coding chr11:56954950 chr11:56954951 synonymous SNV . 0 22 hPsi_associated_SNPs_29706 0 0 0 0 0 exosome 0.438718589619504 0.43871671515123 0 0 hPsi_site_23430 iPseU_CNN:0;iRNA_PseU:0 23431 chr9 136268923 136268923 1 + G A UCEC 136268922 + 136268902 136268942 41 GGGAAATGGCAGAAGCCAGCTGCGGAGTCTTCTGGCTGCTG GGGAAATGGCAGAAGCCAGCTACGGAGTCTTCTGGCTGCTG < 41bp 0.405536327166073 0.821229993135548 0.30784613 0.6126619 prediction 0.642459986271096 Functional Gain - STKLD1 ENSG00000198870 CDS Human protein_coding chr9:136268922 chr9:136268923 nonsynonymous SNV 0.022 4 22 hPsi_associated_SNPs_29707 0 0 0 0 2 nucleolus 0.440725126329664 0.438755769888548 0.2253238 0 hPsi_site_23431 iPseU_CNN:0.2253238;iRNA_PseU:0 23432 chr11 94038931 94038931 1 + C A UCEC 94038930 + 94038910 94038950 41 GCCCAGCCCAGAAGACAAGCTCTATGAGGAGGTACAGAGGC GCCCAGCCCAGAAGACAAGCTATATGAGGAGGTACAGAGGC < 41bp 0.534083339499145 0.855313328951436 0.2711985 0.31003362 prediction 0.642459978904582 Functional Gain - IZUMO1R ENSG00000183560 CDS Human protein_coding chr11:94038930 chr11:94038931 synonymous SNV . 0 22 hPsi_associated_SNPs_29708 0 0 0 0 1 unknown 0.438718586550072 0.438718593095151 0 0 hPsi_site_23432 iPseU_CNN:0;iRNA_PseU:0 23433 chr4 187201439 187201439 1 + G T SARC 187201438 + 187201418 187201458 41 GGAGAAGAACTGGATATTGTTGCTGCAAAAAGTCACGAGGC GGAGAAGAACTGGATATTGTTTCTGCAAAAAGTCACGAGGC < 41bp 0.501561996495899 0.822790909225412 0.37968606 0.64392275 prediction 0.642457825459026 Functional Gain - F11 ENSG00000088926 CDS Human protein_coding chr4:187201438 chr4:187201439 nonsynonymous SNV 0.003 1 22 hPsi_associated_SNPs_29709 0 0 1 0 0 cytosol 0.438722482279194 0.438708410974047 0.2878455 0 hPsi_site_23433 iPseU_CNN:0.2878455;iRNA_PseU:0 23434 chr3 122003874 122003874 1 + C A LGG 122003873 + 122003853 122003893 41 TGCGGGGAAACGGACTTAGATCTGACCGTCCAGGAAACAGG TGCGGGGAAACGGACTTAGATATGACCGTCCAGGAAACAGG < 41bp 0.536051584636756 0.857277526685342 0.37459964 0.43761313 prediction 0.642451884097171 Functional Gain - CASR ENSG00000036828 CDS Human protein_coding chr3:122003873 chr3:122003874 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_29710 0 0 0 0 0 exosome 0.438718532769444 0.438718575903441 0 0 hPsi_site_23434 iPseU_CNN:0;iRNA_PseU:0 23435 chr5 178358735 178358735 1 + G A UCEC 178358734 + 178358714 178358754 41 GTATGTGGGAAACACTTCATTGAACGATCCTCCCTTACTGT GTATGTGGGAAACACTTCATTAAACGATCCTCCCTTACTGT < 41bp 0.410549400922279 0.821224454472986 0.24741465 0.37322336 prediction 0.642448908945971 Functional Gain - ZFP2 ENSG00000198939 CDS Human protein_coding chr5:178358734 chr5:178358735 nonsynonymous SNV 0.070 1 22 hPsi_associated_SNPs_29711 0 0 0 0 0 Nucleus 0.43869910007552 0.438750087766706 0 0 hPsi_site_23435 iPseU_CNN:0;iRNA_PseU:0 23436 chr9 32419050 32419050 1 + G A SARC 32419049 + 32419029 32419069 41 ATTGCAGGTGTCGGTGGTATTGAAGCAGAAGCTGTCATGCT ATTGCAGGTGTCGGTGGTATTAAAGCAGAAGCTGTCATGCT < 41bp 0.402903196132293 0.821223177407012 0.19349623 0.36507285 prediction 0.642446354814025 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32419049 chr9:32419050 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29712 0 0 1 0 1 Ribosome 0.438717859507346 0.438747719567086 0 0 hPsi_site_23436 iPseU_CNN:0;iRNA_PseU:0 23437 chr1 201840318 201840318 1 + G A THYM 201840317 + 201840297 201840337 41 CATGGTGTTCGCTCATCTGGTGCACACTCAGCTAGAACCTC CATGGTGTTCGCTCATCTGGTACACACTCAGCTAGAACCTC < 41bp 0.402564218644079 0.821222965952486 0.2473951 0.62658525 prediction 0.642445931904972 Functional Gain - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201840317 chr1:201840318 synonymous SNV . 0 22 hPsi_associated_SNPs_29713 0 0 1 0 1 Nucleus 0.437951753977582 0.438443441051026 0.2531705 0 hPsi_site_23437 iPseU_CNN:0.2531705;iRNA_PseU:0 23438 chr8 97892124 97892124 1 + C A COAD 97892123 + 97892103 97892143 41 AAATGATGTCAAGAATGGCTTCTCATGGGATCAAAATTGTC AAATGATGTCAAGAATGGCTTATCATGGGATCAAAATTGTC < 41bp 0.527826319956447 0.849044961095089 0.27247983 0.298775 prediction 0.642437282277285 Functional Gain - CPQ ENSG00000104324 CDS Human protein_coding chr8:97892123 chr8:97892124 nonsynonymous SNV 0.934 2 22 hPsi_associated_SNPs_29714 0 0 1 0 1 Endoplasmic reticulum 0.438718601517239 0.438718592996598 0 0 hPsi_site_23438 iPseU_CNN:0;iRNA_PseU:0 23439 chr2 242758233 242758233 1 + G A COAD 242758232 + 242758212 242758252 41 GGGCCTGGTTTTTGCCTGCCTGTACGAGAGCGGGGCCAGGA GGGCCTGGTTTTTGCCTGCCTATACGAGAGCGGGGCCAGGA < 41bp 0.576808844000915 0.898023275025513 0.20264637 0.34818384 prediction 0.642428862049196 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758232 chr2:242758233 synonymous SNV . 0 22 hPsi_associated_SNPs_29715 0 0 0 0 0 cytosol 0.438718686647388 0.438731503508028 0 0 hPsi_site_23439 iPseU_CNN:0;iRNA_PseU:0 23440 chr9 35846950 35846950 1 + G A UVM 35846949 + 35846929 35846969 41 GGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACA GGCCATTCGGAGTCGATATGTACTGGAAGCTGCAGTCTACA < 41bp 0.583300152313735 0.904510477960882 0.19364715 0.5982448 prediction 0.642420651294296 Functional Gain - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35846949 chr9:35846950 synonymous SNV . 0 22 hPsi_associated_SNPs_29716 0 0 0 0 1 cytosol 0.438718599972712 0.438718593004649 0.1964896 0 hPsi_site_23440 iPseU_CNN:0.1964896;iRNA_PseU:0 23441 chr21 31812702 31812702 1 + G A UCEC 31812701 + 31812681 31812721 41 CTGCTGTTTTGGAAGTTACCTGAGGTATCCAGTTTCCACTT CTGCTGTTTTGGAAGTTACCTAAGGTATCCAGTTTCCACTT < 41bp 0.453472876008236 0.821209969697165 0.19118023 0.22667009 prediction 0.642419939394329 Functional Gain - KRTAP15-1 ENSG00000186970 CDS Human protein_coding chr21:31812701 chr21:31812702 synonymous SNV . 0 22 hPsi_associated_SNPs_29717 0 0 0 0 0 unknown 0.438718592858747 0.438718592995099 0 0 hPsi_site_23441 iPseU_CNN:0;iRNA_PseU:0 23442 chr7 150269349 150269349 1 + C A UCEC 150269348 + 150269328 150269368 41 ATTCTGGCACTGCAGCAAAATCCATTACCAAGAAGTGTGAG ATTCTGGCACTGCAGCAAAATACATTACCAAGAAGTGTGAG < 41bp 0.465368128857523 0.821209662771663 0.30021074 0.3246994 prediction 0.642419325543325 Functional Gain - GIMAP4 ENSG00000133574 CDS Human protein_coding chr7:150269348 chr7:150269349 nonsynonymous SNV 0.010 4 22 hPsi_associated_SNPs_29718 0 0 0 0 1 exosome 0.438680721733824 0.438730409042423 0 0 hPsi_site_23442 iPseU_CNN:0;iRNA_PseU:0 23443 chr9 131553922 131553922 1 + G A UCEC 131553921 + 131553901 131553941 41 ATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGT ATGATCATCCAGCCTGGCATTACCAAGGCCAACATGGGTGT < 41bp 0.399880305682769 0.821206992203284 0.30468845 0.3521342 prediction 0.642413984406567 Functional Gain - TBC1D13 ENSG00000107021 CDS Human protein_coding chr9:131553921 chr9:131553922 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29719 0 0 1 0 2 Cytosol 0.437985422421602 0.437950560455657 0 0 hPsi_site_23443 iPseU_CNN:0;iRNA_PseU:0 23444 chr3 52841026 52841026 1 + C A UCEC 52841025 + 52841005 52841045 41 CGCCAATGCTCAGATGGACTTCCAGGTGGAGGTGACAACGG CGCCAATGCTCAGATGGACTTACAGGTGGAGGTGACAACGG < 41bp 0.451518620311198 0.821206083319246 0.20036197 0.3065542 prediction 0.642412166638491 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52841025 chr3:52841026 nonsynonymous SNV 0.218 0 22 hPsi_associated_SNPs_29720 0 0 1 0 1 cytosol 0.438750736205216 0.439160406569332 0 0 hPsi_site_23444 iPseU_CNN:0;iRNA_PseU:0 23445 chr5 79617154 79617154 1 + G T UCEC 79617155 - 79617135 79617175 41 GCTTGTTCTGCTTATACATTTCTACTTTCTTTGCTTCTGAT GCTTGTTCTGCTTATACATTTATACTTTCTTTGCTTCTGAT < 41bp 0.500384568311899 0.821585954117666 0.2765371 0.3658113 prediction 0.642402771611534 Functional Gain - SPZ1 ENSG00000164299 CDS Human protein_coding chr5:79617155 chr5:79617154 stopgain 0.012 0 22 hPsi_associated_SNPs_29721 0 0 0 0 0 unknown 0.438771705791342 0.448883650313777 0 0 hPsi_site_23445 iPseU_CNN:0;iRNA_PseU:0 23446 chr7 143701947 143701947 1 + C A LUSC 143701946 + 143701926 143701966 41 CACTCCTTCTCTCAACCCTTTCATTTATTGCCTAAGAAACC CACTCCTTCTCTCAACCCTTTAATTTATTGCCTAAGAAACC < 41bp 0.480047846327375 0.821201236913296 0.2609821 0.39209265 prediction 0.642402473826592 Functional Gain - OR6B1 ENSG00000221813 CDS Human protein_coding chr7:143701946 chr7:143701947 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29722 0 0 0 0 0 unknown 0.438718547552371 0.43871859438403 0 0 hPsi_site_23446 iPseU_CNN:0;iRNA_PseU:0 23447 chr12 12006417 12006417 1 + C A GBM 12006416 + 12006396 12006436 41 AAGCAGAGGAAACCTCGGATTCTTTTTTCACCATTCTTCCA AAGCAGAGGAAACCTCGGATTATTTTTTCACCATTCTTCCA < 41bp 0.461562656394284 0.821200894271288 0.3834701 0.5019015 prediction 0.642401788542576 Functional Gain - ETV6 ENSG00000139083 CDS Human protein_coding chr12:12006416 chr12:12006417 nonsynonymous SNV 0.997 1 22 hPsi_associated_SNPs_29723 0 0 1 0 2 Cytosol 0.438718592864255 0.438689267339686 0.003803 0 hPsi_site_23447 iPseU_CNN:0.003803;iRNA_PseU:0 23448 chr8 42401705 42401705 1 + G T COAD 42401704 + 42401684 42401724 41 TGAAGCCACCAATGTTTACTTGATAGTTATCCTTGTTAGCT TGAAGCCACCAATGTTTACTTTATAGTTATCCTTGTTAGCT < 41bp 0.508563736215469 0.829758460953967 0.18143871 0.34743363 prediction 0.642389449476997 Functional Gain - SMIM19 ENSG00000176209 CDS Human protein_coding chr8:42401704 chr8:42401705 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29724 0 0 1 0 2 Ribosome 0.438718555371482 0.438718593000157 0 0 hPsi_site_23448 iPseU_CNN:0;iRNA_PseU:0 23449 chr1 26784288 26784288 1 + C A UCEC 26784287 + 26784267 26784307 41 TCTTGCTCATCTTAGTGATATCTCTGAGTCTCTGCTTGATA TCTTGCTCATCTTAGTGATATATCTGAGTCTCTGCTTGATA < 41bp 0.450802818922324 0.821191885443123 0.4369021 0.68709385 prediction 0.642383770886247 Functional Gain - DHDDS ENSG00000117682 CDS Human protein_coding chr1:26784287 chr1:26784288 synonymous SNV . 0 22 hPsi_associated_SNPs_29725 0 0 0 0 1 chromatin 0.438717841949543 0.43871872041586 0.3741877 0 hPsi_site_23449 iPseU_CNN:0.3741877;iRNA_PseU:0 23450 chr2 7023575 7023575 1 + G A rs116498125 7023574 + 7023554 7023594 41 AGAATACCTGGGCAAGTTGGTGAGGTTCTGCAAAGTAGAGT AGAATACCTGGGCAAGTTGGTAAGGTTCTGCAAAGTAGAGT < 41bp 0.399758804479063 0.821190965499173 0.28411347 0.6721531 prediction 0.642381930998347 Functional Gain - RSAD2 ENSG00000134321 CDS Human protein_coding chr2:7023574 chr2:7023575 synonymous SNV . 0 22 hPsi_associated_SNPs_29726 0 0 0 0 2 exosome 0.438718593312185 0.438610528219077 0.3443062 0 hPsi_site_23450 iPseU_CNN:0.3443062;iRNA_PseU:0 23451 chr15 66813485 66813485 1 + C A UCEC 66813484 + 66813464 66813504 41 CTGCGATCGCTTTGGATATTTCCTGGAGTCCTGTGGATGAG CTGCGATCGCTTTGGATATTTACTGGAGTCCTGTGGATGAG < 41bp 0.449741898395553 0.821183038419564 0.32065323 0.7961207 prediction 0.642366076839128 Functional Gain - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66813484 chr15:66813485 nonsynonymous SNV 0.949 3 22 hPsi_associated_SNPs_29727 0 0 1 0 2 Ribosome 0.462805138761175 0.439608198763826 0.5922414 0 hPsi_site_23451 iPseU_CNN:0.5922414;iRNA_PseU:0 23452 chr12 81101504 81101504 1 + G A SKCM 81101503 + 81101483 81101523 41 GGCCAAGGAGGAGAACATGATGATGGACCTTTTTGAAACTG GGCCAAGGAGGAGAACATGATAATGGACCTTTTTGAAACTG < 41bp 0.566314029762493 0.887494617362233 0.33224326 0.8376982 prediction 0.642361175199482 Functional Gain - MYF6 ENSG00000111046 CDS Human protein_coding chr12:81101503 chr12:81101504 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29728 0 0 0 0 0 unknown 0.437212160315627 0.438592018565078 0.6753964 0 hPsi_site_23452 iPseU_CNN:0.6753964;iRNA_PseU:0 23453 chr12 54675662 54675662 1 + G A BLCA 54675661 + 54675641 54675681 41 GGAGGAGGTGGATGCAGCTATGAATGCAAGGCCACACAAGG GGAGGAGGTGGATGCAGCTATAAATGCAAGGCCACACAAGG < 41bp 0.400483966949412 0.821178187908836 0.15086615 0.2335943 prediction 0.642356375817673 Functional Gain - HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54675661 chr12:54675662 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29729 0 0 1 0 1 Cytosol 0.438718592320045 0.438718592995112 0 0 hPsi_site_23453 iPseU_CNN:0;iRNA_PseU:0 23454 chr5 35876352 35876352 1 + C A GBM 35876351 + 35876331 35876371 41 AGTGCATGTGACGCCCCTATTCTCTCCTCTTCCAGGTCCCT AGTGCATGTGACGCCCCTATTATCTCCTCTTCCAGGTCCCT < 41bp 0.478409137352025 0.821173782077249 0.61991477 0.51370466 prediction 0.642347564154498 Functional Gain - IL7R ENSG00000168685 CDS Human protein_coding chr5:35876351 chr5:35876352 nonsynonymous SNV 0.009 0 22 hPsi_associated_SNPs_29730 0 0 0 1 0 Endoplasmic reticulum 0.438719651840939 0.438718592986383 0 0 hPsi_site_23454 iPseU_CNN:0;iRNA_PseU:0 23455 chr1 48705107 48705107 1 + G A HNSC 48705106 + 48705086 48705126 41 GGACCGGAGGCCAGCAGTGCTGAAGGACTTCCACTACCTGT GGACCGGAGGCCAGCAGTGCTAAAGGACTTCCACTACCTGT < 41bp 0.392566408804407 0.821173375805613 0.2958104 0.3897396 prediction 0.642346751611226 Functional Gain - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48705106 chr1:48705107 synonymous SNV . 0 22 hPsi_associated_SNPs_29731 0 0 0 2 0 nucleus 0.438719285329062 0.438713239074912 0 0 hPsi_site_23455 iPseU_CNN:0;iRNA_PseU:0 23456 chr8 11174236 11174236 1 + C T UCEC 11174237 - 11174217 11174257 41 ATACAGGAGCCTCCCACTTCTGCTTGGTGTTACAGTAGGCT ATACAGGAGCCTCCCACTTCTACTTGGTGTTACAGTAGGCT < 41bp 0.431687318626546 0.82116372542192 0.14225486 0.19650188 prediction 0.642327450843839 Functional Gain - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11174237 chr8:11174236 stopgain 0.979 0 22 hPsi_associated_SNPs_29732 0 0 0 0 0 Ribosome 0.438718592995116 0.438718592995214 0 0 hPsi_site_23456 iPseU_CNN:0;iRNA_PseU:0 23457 chr7 100028625 100028625 1 + G A LUAD 100028624 + 100028604 100028644 41 CATCAACTGCAGGGATGAAGTGGTGTCTCCCCTTCCATCTG CATCAACTGCAGGGATGAAGTAGTGTCTCCCCTTCCATCTG < 41bp 0.582665649895961 0.90381982365581 0.30717927 0.4419102 prediction 0.642308347519697 Functional Gain - MEPCE ENSG00000146834 CDS Human protein_coding chr7:100028624 chr7:100028625 synonymous SNV . 0 22 hPsi_associated_SNPs_29733 0 0 1 0 0 chromatin 0.438718840590496 0.438718650625943 0 0 hPsi_site_23457 iPseU_CNN:0;iRNA_PseU:0 23458 chr6 161173996 161173996 1 + C A UCEC 161173995 + 161173975 161174015 41 ACATTTTACAAGGAGTCACTTCTTGGGGTCTTGGCTGTGCA ACATTTTACAAGGAGTCACTTATTGGGGTCTTGGCTGTGCA < 41bp 0.53166639039137 0.852812363796412 0.29955938 0.35577285 prediction 0.642291946810084 Functional Gain - PLG ENSG00000122194 CDS Human protein_coding chr6:161173995 chr6:161173996 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29734 0 0 0 0 0 exosome 0.43857512000576 0.438697610852589 0 0 hPsi_site_23458 iPseU_CNN:0;iRNA_PseU:0 23459 chr9 35660849 35660849 1 + G T LGG 35660850 - 35660830 35660870 41 CTCCCGAGCCTTCACCTGGTTCTGAAGCCTCCATATCCTTG CTCCCGAGCCTTCACCTGGTTATGAAGCCTCCATATCCTTG < 41bp 0.547515384664564 0.868660816457876 0.33157158 0.6166498 prediction 0.642290863586625 Functional Gain - CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660850 chr9:35660849 stopgain 0.977 0 22 hPsi_associated_SNPs_29735 0 0 1 0 0 Endoplasmic reticulum 0.438718099959785 0.438718630628507 0.2332996 0 hPsi_site_23459 iPseU_CNN:0.2332996;iRNA_PseU:0 23460 chr19 50302103 50302103 1 + G T BRCA 50302102 + 50302082 50302122 41 CTGGTGGAATGTCTGGAGACTGTGCTCAACAAGGCCCAGGA CTGGTGGAATGTCTGGAGACTTTGCTCAACAAGGCCCAGGA < 41bp 0.509589180877371 0.830733214666751 0.4083144 0.58538723 prediction 0.642288067578759 Functional Gain - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302102 chr19:50302103 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29736 0 0 1 0 1 Ribosome 0.43868015674965 0.438717964158226 0.17077446 0 hPsi_site_23460 iPseU_CNN:0.17077446;iRNA_PseU:0 23461 chr11 125442450 125442450 1 + C A UCEC 125442449 + 125442429 125442469 41 TGACAGTGTCAAAACCTTTCTCCAGGACCTTGCCAGAGTGA TGACAGTGTCAAAACCTTTCTACAGGACCTTGCCAGAGTGA < 41bp 0.456568153882165 0.821141291123727 0.28510088 0.40882754 prediction 0.642282582247455 Functional Gain - EI24 ENSG00000149547 CDS Human protein_coding chr11:125442449 chr11:125442450 synonymous SNV . 0 22 hPsi_associated_SNPs_29737 0 0 1 0 1 Cytosol 0.438659690428384 0.438720609323852 0 0 hPsi_site_23461 iPseU_CNN:0;iRNA_PseU:0 23462 chr7 28450097 28450097 1 + G A rs73295176 28450096 + 28450076 28450116 41 GAAGGAAGGAACCAAGGAGATGTTTTCTCTCAGCAGCTGCA GAAGGAAGGAACCAAGGAGATATTTTCTCTCAGCAGCTGCA < 41bp 0.450333303409599 0.821138416076863 0.34527904 0.39348918 prediction 0.642276832153726 Functional Gain - CREB5 ENSG00000146592 intronic Human protein_coding chr7:28450096 chr7:28450097 . . 0 22 hPsi_associated_SNPs_29738 0 0 1 0 0 Cytosol 0.439906560736519 0.439218304672483 0 0 hPsi_site_23462 iPseU_CNN:0;iRNA_PseU:0 23463 chr7 94293040 94293040 1 + G A LUSC 94293039 + 94293019 94293059 41 ACCCCTGAGGATGAGGATGATGACATCGAGCTCCGCGGTGC ACCCCTGAGGATGAGGATGATAACATCGAGCTCCGCGGTGC < 41bp 0.404479077831982 0.821133298127302 0.23731625 0.30908358 prediction 0.642266596254603 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293039 chr7:94293040 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_29739 0 0 1 0 0 Endoplasmic reticulum 0.438495605491601 0.438203400059332 0 0 hPsi_site_23463 iPseU_CNN:0;iRNA_PseU:0 23464 chr17 66250635 66250635 1 + C A UCEC 66250634 + 66250614 66250654 41 AGAAGCTCAAGAAAACATCTTCAAGTGACTATTCAATTTTC AGAAGCTCAAGAAAACATCTTAAAGTGACTATTCAATTTTC < 41bp 0.539841548426442 0.86096672658136 0.42782608 0.6725702 prediction 0.642250356309836 Functional Gain - AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66250634 chr17:66250635 stopgain 0.003 0 22 hPsi_associated_SNPs_29740 0 0 1 0 2 Ribosome 0.4382376638144 0.437930405181684 0.3451404 0 hPsi_site_23464 iPseU_CNN:0.3451404;iRNA_PseU:0 23465 chr1 158152865 158152865 1 + G A BRCA 158152864 + 158152844 158152884 41 TATCTCCGAGCAACCCTGGATGTGGTGGCTGGGGAGGCAGC TATCTCCGAGCAACCCTGGATATGGTGGCTGGGGAGGCAGC < 41bp 0.39869886066284 0.821123489279516 0.41618034 0.60824406 prediction 0.642246978559033 Functional Gain - CD1D ENSG00000158473 CDS Human protein_coding chr1:158152864 chr1:158152865 nonsynonymous SNV 0.063 4 22 hPsi_associated_SNPs_29741 0 0 0 0 1 Endoplasmic reticulum 0.438718592849813 0.438718592521972 0.21648812 0 hPsi_site_23465 iPseU_CNN:0.21648812;iRNA_PseU:0 23466 chr12 58018375 58018375 1 + C A CESC 58018374 + 58018354 58018394 41 CTTCTCCATGATGACTGTGGTCTGCCGCACCCGGAGGTGGG CTTCTCCATGATGACTGTGGTATGCCGCACCCGGAGGTGGG < 41bp 0.45969293161875 0.821121793541526 0.32780337 0.41234693 prediction 0.642243587083051 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58018374 chr12:58018375 synonymous SNV . 0 22 hPsi_associated_SNPs_29742 0 0 0 0 2 chromatin 0.438719564045217 0.438681099652301 0 0 hPsi_site_23466 iPseU_CNN:0;iRNA_PseU:0 23467 chrX 115573945 115573945 1 + C A BLCA 115573944 + 115573924 115573964 41 GTCTTTACTACATGTTTGCTTCTTTTCAAAGTGAACTACCA GTCTTTACTACATGTTTGCTTATTTTCAAAGTGAACTACCA < 41bp 0.472892603121932 0.821117217990824 0.20062166 0.2097038 prediction 0.642234435981648 Functional Gain - SLC6A14 ENSG00000087916 CDS Human other chrX:115573944 chrX:115573945 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29743 0 0 0 0 2 cytosol 0.438651992712139 0.438462786794559 0 0 hPsi_site_23467 iPseU_CNN:0;iRNA_PseU:0 23468 chrX 149639249 149639249 1 + G T ESCA 149639248 + 149639228 149639268 41 GAAGCTCTCTAGCCCAGGCTTGCCACAGCAGTCCTTCACCC GAAGCTCTCTAGCCCAGGCTTTCCACAGCAGTCCTTCACCC < 41bp 0.491995732765294 0.8211118251194 0.3635164 0.43859988 prediction 0.642223650238801 Functional Gain - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149639248 chrX:149639249 nonsynonymous SNV 0.888 3 22 hPsi_associated_SNPs_29744 0 0 0 0 0 Nucleus 0.438719259553822 0.438718172852237 0 0 hPsi_site_23468 iPseU_CNN:0;iRNA_PseU:0 23469 chr18 61602259 61602259 1 + C A LUAD 61602258 + 61602238 61602278 41 AAGCTGATTTCTCAGGAATGTCTTCAGCAAGAAACCTATTT AAGCTGATTTCTCAGGAATGTATTCAGCAAGAAACCTATTT < 41bp 0.467400935066173 0.821099390980959 0.41013753 0.72373617 prediction 0.642198781961919 Functional Gain - SERPINB10 ENSG00000242550 CDS Human protein_coding chr18:61602258 chr18:61602259 nonsynonymous SNV 0.317 5 22 hPsi_associated_SNPs_29745 0 0 0 0 0 exosome 0.43871848858871 0.438725904788064 0.44747234 0 hPsi_site_23469 iPseU_CNN:0.44747234;iRNA_PseU:0 White blood cell count 23470 chr8 72756362 72756362 1 + G A LGG 72756361 + 72756341 72756381 41 CGGGGACCGGGTACTCCCGCTGCAGCCCCCGAAGCTCCATC CGGGGACCGGGTACTCCCGCTACAGCCCCCGAAGCTCCATC < 41bp 0.418880747381231 0.821090918628239 0.8137125 0.8899156 prediction 0.642181837256479 Functional Gain - MSC ENSG00000178860 CDS Human protein_coding chr8:72756361 chr8:72756362 stopgain 0.969 0 22 hPsi_associated_SNPs_29746 0 0 0 0 0 exosome 0.438822925177766 0.438705913050737 0.1524062 0 hPsi_site_23470 iPseU_CNN:0.1524062;iRNA_PseU:0 23471 chr2 233410306 233410306 1 + G A SARC 233410305 + 233410285 233410325 41 GCTGGACCGCGTCTGCTTCCTGGCCATGCTCTCGCTCTTCA GCTGGACCGCGTCTGCTTCCTAGCCATGCTCTCGCTCTTCA < 41bp 0.408706951653547 0.821089889078696 0.17741066 0.37787792 prediction 0.642179778157392 Functional Gain - CHRNG ENSG00000196811 CDS Human protein_coding chr2:233410305 chr2:233410306 synonymous SNV . 0 22 hPsi_associated_SNPs_29747 0 0 0 0 1 chromatin 0.438708224937278 0.438719342398379 0 0 hPsi_site_23471 iPseU_CNN:0;iRNA_PseU:0 23472 chr19 58797541 58797541 1 + G T CESC 58797540 + 58797520 58797560 41 GGGACCGAGCTATGGGTGGCTGAGAGAGGAACCACCCAGGG GGGACCGAGCTATGGGTGGCTTAGAGAGGAACCACCCAGGG < 41bp 0.500253041492209 0.821341119139678 0.21563333 0.7066092 prediction 0.642176155294938 Functional Gain - ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58797540 chr19:58797541 stopgain 0.282 0 22 hPsi_associated_SNPs_29748 0 0 1 0 2 chromatin 0.438765885199458 0.438718592995103 0.4132184 0 hPsi_site_23472 iPseU_CNN:0.4132184;iRNA_PseU:0 23473 chr17 33481638 33481638 1 + G A SKCM 33481637 + 33481617 33481657 41 GGCCGTGAGGAAGCAGGGGCTGAGAAGATCTTCCAGAACAA GGCCGTGAGGAAGCAGGGGCTAAGAAGATCTTCCAGAACAA < 41bp 0.396254010487071 0.821082047618222 0.23115271 0.26314032 prediction 0.642164095236445 Functional Gain - UNC45B ENSG00000141161 CDS Human protein_coding chr17:33481637 chr17:33481638 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29749 0 0 0 0 1 Nucleus 0.438718962649231 0.438718930459059 0 0 hPsi_site_23473 iPseU_CNN:0;iRNA_PseU:0 23474 chr17 64880683 64880683 1 + G A BLCA 64880682 + 64880662 64880702 41 TACATCTCCAGCATCAACGATGAGATGCTCAACAGGACCAA TACATCTCCAGCATCAACGATAAGATGCTCAACAGGACCAA < 41bp 0.586441501809999 0.907520258006911 0.23888987 0.27510008 prediction 0.642157512393824 Functional Gain - CACNG5 ENSG00000075429 CDS Human protein_coding chr17:64880682 chr17:64880683 nonsynonymous SNV 0.959 5 22 hPsi_associated_SNPs_29750 0 0 0 0 1 unknown 0.438254793765738 0.437676349781061 0 0 hPsi_site_23474 iPseU_CNN:0;iRNA_PseU:0 23475 chr1 247769655 247769655 1 + C A COAD 247769654 + 247769634 247769674 41 TATATTCTATGGCACCATAATCTACGTGTACCTGCAACCTA TATATTCTATGGCACCATAATATACGTGTACCTGCAACCTA < 41bp 0.515089415476246 0.836160776200654 0.29375425 0.3298636 prediction 0.642142721448814 Functional Gain - OR2G3 ENSG00000177476 CDS Human protein_coding chr1:247769654 chr1:247769655 synonymous SNV . 0 22 hPsi_associated_SNPs_29751 0 0 0 0 0 unknown 0.438724233725572 0.438718389207718 0 0 hPsi_site_23475 iPseU_CNN:0;iRNA_PseU:0 23476 chr5 7709444 7709444 1 + G T HNSC 7709443 + 7709423 7709463 41 TGGGGGGCAGCCAAGCCCTTTGCACACCTACATCACAGGGA TGGGGGGCAGCCAAGCCCTTTTCACACCTACATCACAGGGA < 41bp 0.503562745833414 0.824628985934653 0.5750336 0.5264126 prediction 0.642132480202478 Functional Gain - ADCY2 ENSG00000078295 CDS Human protein_coding chr5:7709443 chr5:7709444 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_29752 0 0 0 0 1 exosome 0.438716025322025 0.438717599989225 0 0 hPsi_site_23476 iPseU_CNN:0;iRNA_PseU:0 23477 chr2 239757291 239757291 1 + C A UCEC 239757290 + 239757270 239757310 41 CGAGCGCCTCAGCTACGCCTTCTCCGTGTGGCGCATGGAGG CGAGCGCCTCAGCTACGCCTTATCCGTGTGGCGCATGGAGG < 41bp 0.533789562529192 0.854854857514355 0.3425942 0.6930029 prediction 0.642130589970327 Functional Gain - TWIST2 ENSG00000233608 CDS Human protein_coding chr2:239757290 chr2:239757291 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_29753 0 0 0 0 0 exosome 0.438766982060757 0.438767677591967 0.3860058 0 hPsi_site_23477 iPseU_CNN:0.3860058;iRNA_PseU:0 23478 chr11 19170818 19170818 1 + C A KICH 19170817 + 19170797 19170837 41 TGGAGAGGGATTCAGCAGCATCCACCTGGCAGTATTGTTTC TGGAGAGGGATTCAGCAGCATACACCTGGCAGTATTGTTTC < 41bp 0.455138143269448 0.82106489057951 0.1512627 0.47739032 prediction 0.642129781159019 Functional Gain - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19170817 chr11:19170818 synonymous SNV . 0 22 hPsi_associated_SNPs_29754 0 0 1 0 2 Nucleus 0.438762249699416 0.43841257975687 0 0 hPsi_site_23478 iPseU_CNN:0;iRNA_PseU:0 23479 chr1 154235657 154235657 1 + G A rs11265398 154235656 + 154235636 154235676 41 CAAGGCTGGGGGCTGTGTTTTGTGTGTGTGTATAAATTTGC CAAGGCTGGGGGCTGTGTTTTATGTGTGTGTATAAATTTGC < 41bp 0.566673137294294 0.887733480015631 0.5477997 0.6439494 prediction 0.642120685442674 Functional Gain - UBAP2L ENSG00000143569 UTR3 Human protein_coding chr1:154235656 chr1:154235657 . . 0 22 hPsi_associated_SNPs_29755 0 0 1 6 1 Nucleus 0.438965564914423 0.439038164635012 0.1922994 0 hPsi_site_23479 iPseU_CNN:0.1922994;iRNA_PseU:0 23480 chr16 89967134 89967134 1 + G T LUAD 89967133 + 89967113 89967153 41 AGCAGACAGACCTCCCTGAGTGTGAGCAGAGCTCTGCCAGG AGCAGACAGACCTCCCTGAGTTTGAGCAGAGCTCTGCCAGG < 41bp 0.51703683060071 0.838096086349852 0.27992338 0.39999574 prediction 0.642118511498285 Functional Gain - TCF25 ENSG00000141002 CDS Human protein_coding chr16:89967133 chr16:89967134 nonsynonymous SNV 0.315 0 22 hPsi_associated_SNPs_29756 0 0 1 0 2 Cytosol 0.438725888601304 0.439046051440206 0 0 hPsi_site_23480 iPseU_CNN:0;iRNA_PseU:0 23481 chr17 7329811 7329811 1 + G A COAD 7329810 + 7329790 7329830 41 CCCACATCGCAGCCAAAAGATGTCACAACTACACCGAGTGC CCCACATCGCAGCCAAAAGATATCACAACTACACCGAGTGC < 41bp 0.41418846713999 0.821053244694103 0.32896355 0.39347982 prediction 0.642106489388206 Functional Gain - C17orf74 ENSG00000184560 CDS Human protein_coding chr17:7329810 chr17:7329811 nonsynonymous SNV 0.819 0 22 hPsi_associated_SNPs_29757 0 0 0 0 0 exosome 0.438697816525859 0.438717968826603 0 0 hPsi_site_23481 iPseU_CNN:0;iRNA_PseU:0 23482 chr5 137219226 137219226 1 + G A BLCA 137219225 + 137219205 137219245 41 GATGCAGGGGCTTATGCATGTGTTGCCAAGAATAGAGCAGG GATGCAGGGGCTTATGCATGTATTGCCAAGAATAGAGCAGG < 41bp 0.405741797684296 0.821053132715643 0.27128932 0.41558242 prediction 0.642106265431285 Functional Gain - MYOT ENSG00000120729 CDS Human protein_coding chr5:137219225 chr5:137219226 nonsynonymous SNV 0.973 2 22 hPsi_associated_SNPs_29758 0 0 0 0 1 Cytosol 0.438690244077594 0.438698292657927 0 0 hPsi_site_23482 iPseU_CNN:0;iRNA_PseU:0 23483 chr20 43058208 43058208 1 + C A LUAD 43058207 + 43058187 43058227 41 CACCGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGCTCCTG CACCGCCAGGTGGCTCAGGGTATGAGCCCTATAAGCTCCTG < 41bp 0.468898252512002 0.821052384166076 0.49861205 0.72431654 prediction 0.642104768332152 Functional Gain - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43058207 chr20:43058208 nonsynonymous SNV 0.993 0 22 hPsi_associated_SNPs_29759 0 0 1 0 1 Ribosome 0.438716195634124 0.438718592987029 0.44863308 0 hPsi_site_23483 iPseU_CNN:0.44863308;iRNA_PseU:0 23484 chrX 72667171 72667171 1 + G A SKCM 72667170 + 72667150 72667190 41 CCTGGGGGCGACGGCACAGCTGGGACAGGCGGCACAGGGGG CCTGGGGGCGACGGCACAGCTAGGACAGGCGGCACAGGGGG < 41bp 0.569104624843356 0.890156247349302 0.2925113 0.42237556 prediction 0.642103245011892 Functional Gain - CDX4 ENSG00000131264 CDS Human protein_coding chrX:72667170 chrX:72667171 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_29760 0 0 0 0 0 exosome 0.438799644631512 0.43801481925388 0 0 hPsi_site_23484 iPseU_CNN:0;iRNA_PseU:0 23485 chr22 35779116 35779116 1 + C A LUAD 35779115 + 35779095 35779135 41 TCAGCATGCCCCAGGATTTGTCAGAGGCCCTGAAGGAGGCC TCAGCATGCCCCAGGATTTGTAAGAGGCCCTGAAGGAGGCC < 41bp 0.446344309311613 0.821048754727427 0.20144442 0.38015962 prediction 0.642097509454855 Functional Gain - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35779115 chr22:35779116 stopgain 1.000 1 22 hPsi_associated_SNPs_29761 0 0 1 0 1 exosome 0.438718592997908 0.438718592996085 0 0 hPsi_site_23485 iPseU_CNN:0;iRNA_PseU:0 23486 chr11 60383295 60383295 1 + G A rs569522779 60383294 + 60383274 60383314 41 AGGCCCCAAATTGAGGAAGTTGACTGCCAGATCACACTCTG AGGCCCCAAATTGAGGAAGTTAACTGCCAGATCACACTCTG < 41bp 0.536755791331357 0.857801322158147 0.33329654 0.76662004 prediction 0.642091061653579 Functional Gain - LINC00301 ENSG00000181995 ncRNA_exonic Human lincRNA chr11:60383294 chr11:60383295 . . 0 22 hPsi_associated_SNPs_29762 0 0 0 0 1 unknown 0.438719270928711 0.438704891080425 0.53324008 0 hPsi_site_23486 iPseU_CNN:0.53324008;iRNA_PseU:0 23487 chr1 16096962 16096962 1 + G T UCEC 16096961 + 16096941 16096981 41 AGAGCTGGCTGTGGAGGCCATGAAGAGGCAGTACCATGCCC AGAGCTGGCTGTGGAGGCCATTAAGAGGCAGTACCATGCCC < 41bp 0.527264815337372 0.848306398748026 0.29517066 0.40122187 prediction 0.642083166821309 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16096961 chr1:16096962 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29763 0 0 0 0 1 Ribosome 0.438718597783667 0.438718592993172 0 0 hPsi_site_23487 iPseU_CNN:0;iRNA_PseU:0 23488 chr10 103587693 103587693 1 + C T LGG 103587694 - 103587674 103587714 41 ATGGGCAAGTACACGTACCCTGCACTCCGGGAGGAGGCCCC ATGGGCAAGTACACGTACCCTACACTCCGGGAGGAGGCCCC < 41bp 0.578415287969452 0.899449268721962 0.31079006 0.570175 prediction 0.642067961505019 Functional Gain - KCNIP2 ENSG00000120049 CDS Human protein_coding chr10:103587694 chr10:103587693 nonsynonymous SNV 0.992 1 22 hPsi_associated_SNPs_29764 0 0 1 0 2 chromatin 0.43871333772655 0.438694073520457 0.14035 0 hPsi_site_23488 iPseU_CNN:0.14035;iRNA_PseU:0 23489 chr9 135073796 135073796 1 + C A LUAD 135073795 + 135073775 135073815 41 CTTCGAGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCCCG CTTCGAGGTGCGGGACCGCTTAGCCATCTTTGCCGGCCCCG < 41bp 0.451065245205014 0.821031502335303 0.6329497 0.6416376 prediction 0.642063004670605 Functional Gain - NTNG2 ENSG00000196358 CDS Human protein_coding chr9:135073795 chr9:135073796 nonsynonymous SNV 0.988 0 22 hPsi_associated_SNPs_29765 0 0 0 0 0 exosome 0.438791629919129 0.438554175489291 0.0173758000000002 0 hPsi_site_23489 iPseU_CNN:0.0173758000000002;iRNA_PseU:0 23490 chr12 50344746 50344746 1 + G A UCEC 50344745 + 50344725 50344765 41 CTGCCCTCTGTGCTACAGATTGCCATGGCGTTTGGCTTGGG CTGCCCTCTGTGCTACAGATTACCATGGCGTTTGGCTTGGG < 41bp 0.410113551515499 0.821030176297541 0.38221145 0.5687636 prediction 0.642060352595083 Functional Gain - AQP2 ENSG00000167580 CDS Human protein_coding chr12:50344745 chr12:50344746 nonsynonymous SNV 0.225 3 22 hPsi_associated_SNPs_29766 0 0 0 0 0 Ribosome 0.438653344152937 0.438729732046691 0.1375272 0 hPsi_site_23490 iPseU_CNN:0.1375272;iRNA_PseU:0 23491 chr6 116836836 116836836 1 + C A LUSC 116836835 + 116836815 116836855 41 CATGTTATGCTCGCTGCCGATCTAAAGTTAGCTACCTTCAG CATGTTATGCTCGCTGCCGATATAAAGTTAGCTACCTTCAG < 41bp 0.528973530629415 0.850002902451125 0.21029726 0.20344025 prediction 0.64205874364342 Functional Gain - FAM26E ENSG00000178033 CDS Human protein_coding chr6:116836835 chr6:116836836 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_29767 0 0 0 0 1 exosome 0.438718510510782 0.438724029798516 0 0 hPsi_site_23491 iPseU_CNN:0;iRNA_PseU:0 23492 chr19 36430765 36430765 1 + G T LUSC 36430764 + 36430744 36430784 41 CAACAACCAGCTGGCAGCGCTGGCGGCCGGCGCCCTGGATG CAACAACCAGCTGGCAGCGCTTGCGGCCGGCGCCCTGGATG < 41bp 0.490220109059007 0.821026771968024 0.12228146 0.22865874 prediction 0.642053543936048 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430764 chr19:36430765 synonymous SNV . 0 22 hPsi_associated_SNPs_29768 0 0 0 0 0 nucleus 0.439334521660219 0.438700351439086 0 0 hPsi_site_23492 iPseU_CNN:0;iRNA_PseU:0 23493 chr11 55433545 55433545 1 + G A SKCM 55433544 + 55433524 55433564 41 TGCCATGAAGAAACTCTGGATGAAATGGGAGGCTTTGGCTG TGCCATGAAGAAACTCTGGATAAAATGGGAGGCTTTGGCTG < 41bp 0.453584885459733 0.821024883141608 0.24919719 0.36867163 prediction 0.642049766283217 Functional Gain - OR4C6 ENSG00000181903 CDS Human protein_coding chr11:55433544 chr11:55433545 nonsynonymous SNV 0.365 0 22 hPsi_associated_SNPs_29769 0 0 0 0 0 unknown 0.433258922656444 0.438712620046309 0 0 hPsi_site_23493 iPseU_CNN:0;iRNA_PseU:0 23494 chr13 22246084 22246084 1 + C A READ 22246083 + 22246063 22246103 41 AGGTGAAGTTGGGAACTATTTCGGTGTGCAGGATGCGGTAC AGGTGAAGTTGGGAACTATTTAGGTGTGCAGGATGCGGTAC < 41bp 0.460710630396597 0.821024641176534 0.23436719 0.40362942 prediction 0.642049282353067 Functional Gain - FGF9 ENSG00000102678 CDS Human protein_coding chr13:22246083 chr13:22246084 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29770 0 0 1 0 0 exosome 0.438702916274439 0.438719418777577 0 0 hPsi_site_23494 iPseU_CNN:0;iRNA_PseU:0 23495 chr3 98110050 98110050 1 + G A UCEC 98110049 + 98110029 98110069 41 ATCAATCATTTTTTCTGTGATGTTCTTCCATTATATAGACT ATCAATCATTTTTTCTGTGATATTCTTCCATTATATAGACT < 41bp 0.463896190910413 0.821023739818129 0.19803151 0.22885624 prediction 0.642047479636259 Functional Gain - OR5K3 ENSG00000206536 CDS Human protein_coding chr3:98110049 chr3:98110050 nonsynonymous SNV 0.904 0 22 hPsi_associated_SNPs_29771 0 0 0 0 0 unknown 0.437061871870092 0.43869475905297 0 0 hPsi_site_23495 iPseU_CNN:0;iRNA_PseU:0 23496 chr11 57317567 57317567 1 + G A HNSC 57317566 + 57317546 57317586 41 CCTTGTGCAGAAAGGACTGGTGAAGACCAAGAAGAAGTGAG CCTTGTGCAGAAAGGACTGGTAAAGACCAAGAAGAAGTGAG < 41bp 0.411877636414049 0.82102032644965 0.39365232 0.6434706 prediction 0.642040652899301 Functional Gain - SMTNL1 ENSG00000214872 CDS Human protein_coding chr11:57317566 chr11:57317567 synonymous SNV . 0 22 hPsi_associated_SNPs_29772 0 0 0 0 0 exosome 0.438719899517516 0.438718544532056 0.2869412 0 hPsi_site_23496 iPseU_CNN:0.2869412;iRNA_PseU:0 23497 chr16 89783205 89783205 1 + G A rs118114589 89783204 + 89783184 89783224 41 TAGCTTCAGCATCTTGGAGGTGTCGGGGGGCACAGTTTCCC TAGCTTCAGCATCTTGGAGGTATCGGGGGGCACAGTTTCCC < 41bp 0.583165107810016 0.904181122237572 0.2583348 0.6267499 prediction 0.642032028855111 Functional Gain - VPS9D1 ENSG00000075399 CDS Human protein_coding chr16:89783204 chr16:89783205 synonymous SNV . 0 22 hPsi_associated_SNPs_29773 0 0 1 0 0 Cytosol 0.438718690209723 0.438718629712111 0.2534998 0 hPsi_site_23497 iPseU_CNN:0.2534998;iRNA_PseU:0 23498 chr19 8436198 8436198 1 + G T SARC 8436197 + 8436177 8436217 41 CAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACG CAGCCGCCTGGCCGTGCAGCTTCGGGACTGGGATGGCAACG < 41bp 0.526054449829791 0.847069713598177 0.23214182 0.53904593 prediction 0.642030527536771 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436197 chr19:8436198 synonymous SNV . 0 22 hPsi_associated_SNPs_29774 0 0 1 0 1 Cytosol 0.438718825012159 0.438920729922383 0.07809186 0 hPsi_site_23498 iPseU_CNN:0.07809186;iRNA_PseU:0 23499 chr21 41032700 41032700 1 + G A BLCA 41032699 + 41032679 41032719 41 TCATCCCACAAACAGTTGGCTGAGCGCATGGCCATCCGGCA TCATCCCACAAACAGTTGGCTAAGCGCATGGCCATCCGGCA < 41bp 0.422734628950847 0.821013887950216 0.3170875 0.78291905 prediction 0.642027775900432 Functional Gain - B3GALT5 ENSG00000183778 CDS Human protein_coding chr21:41032699 chr21:41032700 nonsynonymous SNV 0.010 0 22 hPsi_associated_SNPs_29775 0 0 0 0 0 exosome 0.43872244155018 0.438740471686283 0.5658381 0 hPsi_site_23499 iPseU_CNN:0.5658381;iRNA_PseU:0 23500 chr15 73994852 73994852 1 + G A UCEC 73994851 + 73994831 73994871 41 ATCCCTGAGGCTGCAGCGCGTGCGTGTGGCGGACGAGGGCA ATCCCTGAGGCTGCAGCGCGTACGTGTGGCGGACGAGGGCA < 41bp 0.58683944766905 0.907850268577605 0.3075451 0.66270953 prediction 0.642021641817109 Functional Gain - CD276 ENSG00000103855 CDS Human protein_coding chr15:73994851 chr15:73994852 synonymous SNV . 0 22 hPsi_associated_SNPs_29776 0 0 0 0 1 Ribosome 0.43857771208661 0.438584531758582 0.32541906 0 hPsi_site_23500 iPseU_CNN:0.32541906;iRNA_PseU:0 23501 chr6 42996900 42996900 1 + C A UCEC 42996899 + 42996879 42996919 41 CAGCAAGAAATTGGAGAACTTCTTGAGTCGAAAGAGGCGAC CAGCAAGAAATTGGAGAACTTATTGAGTCGAAAGAGGCGAC < 41bp 0.47590541771563 0.821008477443785 0.3011561 0.3387334 prediction 0.642016954887569 Functional Gain - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996899 chr6:42996900 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29777 0 0 1 0 1 Ribosome 0.43871866822617 0.438718537531566 0 0 hPsi_site_23501 iPseU_CNN:0;iRNA_PseU:0 23502 chr8 27529129 27529129 1 + G A rs568453172 27529128 + 27529108 27529148 41 CGCACATGCACACATACACATGCATGCACACATACACAGGC CGCACATGCACACATACACATACATGCACACATACACAGGC < 41bp 0.437433239491733 0.821008248816878 0.17219213 0.3085727 prediction 0.642016497633756 Functional Gain - SCARA3 ENSG00000168077 UTR3 Human protein_coding chr8:27529128 chr8:27529129 . . 0 22 hPsi_associated_SNPs_29778 0 0 1 2 0 Cytosol 0.432446675258762 0.431650785473208 0 0 hPsi_site_23502 iPseU_CNN:0;iRNA_PseU:0 23503 chr7 27225403 27225403 1 + G A rs61741589 27225402 + 27225382 27225422 41 CTTGCTCTGGGAAGCGCCTCTGCCTCCGACCCTAGCCGGAA CTTGCTCTGGGAAGCGCCTCTACCTCCGACCCTAGCCGGAA < 41bp 0.441847222651097 0.821005675768772 0.22954085 0.6057199 prediction 0.642011351537543 Functional Gain - HOXA11-AS ENSG00000240990 ncRNA_exonic Human antisense chr7:27225402 chr7:27225403 . . 0 22 hPsi_associated_SNPs_29779 0 0 1 0 0 unknown 0.438718592995101 0.438718592989584 0.2114398 0 hPsi_site_23503 iPseU_CNN:0.2114398;iRNA_PseU:0 23504 chr7 7634740 7634740 1 + C A UCEC 7634739 + 7634719 7634759 41 ATTCACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAGC ATTCACAGGAGTAAGTTGGATACCAGTTCCAAGCCTTTAGC < 41bp 0.534820622678142 0.855824870428819 0.32526863 0.5574962 prediction 0.642008495501353 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7634739 chr7:7634740 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29780 0 0 1 0 1 Nucleus 0.438638836253997 0.438817621300162 0.1149924 0 hPsi_site_23504 iPseU_CNN:0.1149924;iRNA_PseU:0 23505 chr1 223947010 223947010 1 + C A UCEC 223947009 + 223946989 223947029 41 CATCCACCTCAGCAAAAACTTCTTCCTGACGAATCGCGCCA CATCCACCTCAGCAAAAACTTATTCCTGACGAATCGCGCCA < 41bp 0.455565193739587 0.821003691637315 0.35565108 0.6768635 prediction 0.642007383274631 Functional Gain - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223947009 chr1:223947010 nonsynonymous SNV 0.970 5 22 hPsi_associated_SNPs_29781 0 0 1 0 1 Ribosome 0.438712352139051 0.438718228864414 0.353727 0 hPsi_site_23505 iPseU_CNN:0.353727;iRNA_PseU:0 23506 chr11 117258048 117258048 1 + G A COAD 117258047 + 117258027 117258067 41 GGAATCCAAGCAAGAGAAGATGCAGCAACTGCGGGAGAAGC GGAATCCAAGCAAGAGAAGATACAGCAACTGCGGGAGAAGC < 41bp 0.418991218983316 0.821002966443949 0.28620827 0.3310288 prediction 0.642005932887898 Functional Gain - CEP164 ENSG00000110274 CDS Human protein_coding chr11:117258047 chr11:117258048 nonsynonymous SNV 0.849 0 22 hPsi_associated_SNPs_29782 0 0 1 0 1 Cytosol 0.439606736400882 0.439109560826874 0 0 hPsi_site_23506 iPseU_CNN:0;iRNA_PseU:0 23507 chr7 107559493 107559493 1 + G A STAD 107559492 + 107559472 107559512 41 AAATGAAGCTGCTCTTGCTTTGGAATATGGAGCATCCTGTG AAATGAAGCTGCTCTTGCTTTAGAATATGGAGCATCCTGTG < 41bp 0.579715505664189 0.900715587631175 0.30838385 0.5037665 prediction 0.642000163933973 Functional Gain - DLD ENSG00000091140 CDS Human protein_coding chr7:107559492 chr7:107559493 synonymous SNV . 0 22 hPsi_associated_SNPs_29783 0 0 1 0 1 Cytosol 0.438722410330173 0.438739460252358 0.00753300000000001 0 hPsi_site_23507 iPseU_CNN:0.00753300000000001;iRNA_PseU:0 23508 chr14 21464377 21464377 1 + G T UCEC 21464376 + 21464356 21464396 41 ATGTGTTCACAGTGTCCCCATGAACTCCCTTGTCCCCAGTT ATGTGTTCACAGTGTCCCCATTAACTCCCTTGTCCCCAGTT < 41bp 0.521522388566258 0.842517561579385 0.31923783 0.49978188 prediction 0.641990346026254 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464376 chr14:21464377 stopgain 1.000 1 22 hPsi_associated_SNPs_29784 0 0 1 0 1 Ribosome 0.438686449671989 0.438718592995099 0 0 hPsi_site_23508 iPseU_CNN:0;iRNA_PseU:0 23509 chr12 56335855 56335855 1 + C A UCEC 56335854 + 56335834 56335874 41 GACGGCACAGTAGGCTGGATTCTAGAGACCATTGGTCAGTG GACGGCACAGTAGGCTGGATTATAGAGACCATTGGTCAGTG < 41bp 0.543238949703881 0.86423179061674 0.32393277 0.35845447 prediction 0.641985681825718 Functional Gain - DGKA ENSG00000065357 CDS Human protein_coding chr12:56335854 chr12:56335855 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29785 0 0 0 0 2 Cytosol 0.438718773683348 0.438718621039679 0 0 hPsi_site_23509 iPseU_CNN:0;iRNA_PseU:0 23510 chr3 38442402 38442402 1 + G A rs2234627 38442401 + 38442381 38442421 41 GGTCTTGCAGGTGGAACAGATGTGCCCTTTTCAGAGGTTGT GGTCTTGCAGGTGGAACAGATATGCCCTTTTCAGAGGTTGT < 41bp 0.406527928287582 0.820989300373348 0.2187401 0.42045885 prediction 0.641978600746695 Functional Gain - XYLB ENSG00000093217 CDS Human protein_coding chr3:38442401 chr3:38442402 nonsynonymous SNV 0.551 0 22 hPsi_associated_SNPs_29786 0 0 1 0 2 chromatin 0.439103395091958 0.439325056694882 0 0 hPsi_site_23510 iPseU_CNN:0;iRNA_PseU:0 23511 chr18 8638227 8638227 1 + G T SARC 8638226 + 8638206 8638246 41 GCCTGAGATACCGCCAGAACTGCCTCCACCAAGACCACATG GCCTGAGATACCGCCAGAACTTCCTCCACCAAGACCACATG < 41bp 0.513693531760916 0.834678386547962 0.30581808 0.6081909 prediction 0.641969709574091 Functional Gain - RAB12 ENSG00000206418 CDS Human protein_coding chr18:8638226 chr18:8638227 synonymous SNV . 0 22 hPsi_associated_SNPs_29787 0 0 1 0 1 Ribosome 0.438402708703065 0.438530858259605 0.2163818 0 hPsi_site_23511 iPseU_CNN:0.2163818;iRNA_PseU:0 23512 chrX 155235833 155235833 1 + C A rs143176678 155235832 + 155235812 155235852 41 GCTGACTGGCCCGACCTACCTCCTGTTCAAGCTGTCGCCCA GCTGACTGGCCCGACCTACCTACTGTTCAAGCTGTCGCCCA < 41bp 0.445738533506201 0.820976987034472 0.18346834 0.3858402 prediction 0.641953974068945 Functional Gain - IL9R ENSG00000124334 CDS Human protein_coding chrX:155235832 chrX:155235833 synonymous SNV . 0 22 hPsi_associated_SNPs_29788 0 0 0 0 2 exosome 0.438718592335167 0.438718587290287 0 0 hPsi_site_23512 iPseU_CNN:0;iRNA_PseU:0 23513 chr17 6905052 6905052 1 + G T SARC 6905051 + 6905031 6905071 41 GCACGAGATCCAGTATCACTTGCTGAACACTCACCTGGTGG GCACGAGATCCAGTATCACTTTCTGAACACTCACCTGGTGG < 41bp 0.515078425810385 0.836053731878488 0.29579332 0.9032033 prediction 0.641950612136205 Functional Gain - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6905051 chr17:6905052 nonsynonymous SNV 0.495 2 22 hPsi_associated_SNPs_29789 0 0 0 0 1 Cytosol 0.439331345445645 0.448757708545051 0.8064066 0 hPsi_site_23513 iPseU_CNN:0.8064066;iRNA_PseU:0 23514 chr14 31494964 31494964 1 + G A rs147839434 31494963 + 31494943 31494983 41 GGGACTCCAGGAAAAGCCGTTGAGAGGACCATCACAACCTG GGGACTCCAGGAAAAGCCGTTAAGAGGACCATCACAACCTG < 41bp 0.56081687433491 0.881789861100926 0.3031544 0.5162554 prediction 0.641945973532033 Functional Gain - AP4S1 ENSG00000100478 UTR5 Human protein_coding chr14:31494963 chr14:31494964 . . 0 22 hPsi_associated_SNPs_29790 0 0 1 0 1 Cytosol 0.43871784941424 0.438718457679072 0.0325108000000001 0 hPsi_site_23514 iPseU_CNN:0.0325108000000001;iRNA_PseU:0 23515 chr3 43384937 43384937 1 + C A UCEC 43384936 + 43384916 43384956 41 AGAAAGAAATACAGACCAGATCTGCAAGCCCGAGCAATATC AGAAAGAAATACAGACCAGATATGCAAGCCCGAGCAATATC < 41bp 0.552246680294571 0.87321411314903 0.3291229 0.3810143 prediction 0.641934865708918 Functional Gain - SNRK ENSG00000163788 CDS Human protein_coding chr3:43384936 chr3:43384937 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29791 0 0 1 0 1 Cytosol 0.43871831350103 0.438701958836624 0 0 hPsi_site_23515 iPseU_CNN:0;iRNA_PseU:0 23516 chr19 33467376 33467376 1 + C A UCEC 33467375 + 33467355 33467395 41 GAGCCCAGTAAGAACCCTCTTCTCGGGAAGAAACGGGCCCT GAGCCCAGTAAGAACCCTCTTATCGGGAAGAAACGGGCCCT < 41bp 0.456505926191913 0.82096585260622 0.25274456 0.31618124 prediction 0.64193170521244 Functional Gain - FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33467375 chr19:33467376 nonsynonymous SNV 0.065 0 22 hPsi_associated_SNPs_29792 0 0 0 0 1 cytosol 0.438718592995101 0.438718595945294 0 0 hPsi_site_23516 iPseU_CNN:0;iRNA_PseU:0 23517 chr19 10225751 10225751 1 + C A rs537538801 10225750 + 10225730 10225770 41 CTCTCGGAGGCTGTCTTCTGTCGCCAAGGGTCCCGGACCGA CTCTCGGAGGCTGTCTTCTGTAGCCAAGGGTCCCGGACCGA < 41bp 0.486305826919394 0.820964206258548 0.5248042 0.7810533 prediction 0.641928412517096 Functional Gain - EIF3G;P2RY11;PPAN-P2RY11 ENSG00000130811;ENSG00000244165 UTR3 Human other chr19:10225750 chr19:10225751 . . 0 22 hPsi_associated_SNPs_29793 0 0 1 0 0 unknown 0.438718346211257 0.438718716074638 0.5124982 0 hPsi_site_23517 iPseU_CNN:0.5124982;iRNA_PseU:0 23518 chr17 33454248 33454248 1 + G A SKCM 33454247 + 33454227 33454267 41 ATGGCCAAGAATGCAGAAAATGAGGACCTGGCGCTCGGCCC ATGGCCAAGAATGCAGAAAATAAGGACCTGGCGCTCGGCCC < 41bp 0.407000821194119 0.820963952397712 0.3388183 0.51383513 prediction 0.641927904795423 Functional Gain - FNDC8 ENSG00000073598 CDS Human protein_coding chr17:33454247 chr17:33454248 nonsynonymous SNV 0.077 0 22 hPsi_associated_SNPs_29794 0 0 0 0 0 exosome 0.438718593409065 0.438719831301254 0.0276702600000001 0 hPsi_site_23518 iPseU_CNN:0.0276702600000001;iRNA_PseU:0 23519 chrX 150349115 150349115 1 + G A CESC 150349114 + 150349094 150349134 41 CGTGAACAAGACCGTGCCCATGCCTGTCCTGCTGTGGAGGA CGTGAACAAGACCGTGCCCATACCTGTCCTGCTGTGGAGGA < 41bp 0.40606145262707 0.820961259381459 0.4600867 0.7977748 prediction 0.641922518762917 Functional Gain - GPR50 ENSG00000102195 CDS Human protein_coding chrX:150349114 chrX:150349115 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29795 0 0 0 0 0 exosome 0.507189009656742 0.449537796798388 0.5955496 0 hPsi_site_23519 iPseU_CNN:0.5955496;iRNA_PseU:0 23520 chr6 107113715 107113715 1 + G A rs2015205 107113714 + 107113694 107113734 41 CCAAGGGTTGCCAATAGGACTGCAGTTTATTGGACGTGCGT CCAAGGGTTGCCAATAGGACTACAGTTTATTGGACGTGCGT < 41bp 0.424626811791899 0.820960372317576 0.22070867 0.31152964 prediction 0.641920744635151 Functional Gain - QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107113714 chr6:107113715 synonymous SNV . 0 22 hPsi_associated_SNPs_29796 0 0 1 0 1 Ribosome 0.438717368360093 0.438718385799654 0 0 hPsi_site_23520 iPseU_CNN:0;iRNA_PseU:0 23521 chr14 76045352 76045352 1 + G A OV 76045351 + 76045331 76045371 41 CCCAACCAGGAAGAGAGCGATGACACCCCTGTGCCGGAGTC CCCAACCAGGAAGAGAGCGATAACACCCCTGTGCCGGAGTC < 41bp 0.406324924644737 0.820954214634461 0.3564732 0.5551235 prediction 0.641908429268923 Functional Gain - FLVCR2 ENSG00000119686 CDS Human protein_coding chr14:76045351 chr14:76045352 nonsynonymous SNV 0.009 1 22 hPsi_associated_SNPs_29797 0 0 0 0 0 Cytosol 0.438720388848463 0.438719359721384 0.110247 0 hPsi_site_23521 iPseU_CNN:0.110247;iRNA_PseU:0 23522 chr5 180651674 180651674 1 + C T OV 180651675 - 180651655 180651695 41 TTCTTGGTGTTTGGGACAGATGCCCTGATCGGTCACGCGGC TTCTTGGTGTTTGGGACAGATACCCTGATCGGTCACGCGGC < 41bp 0.569457089108814 0.890409615775354 0.26989523 0.56819135 prediction 0.64190505333308 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651675 chr5:180651674 synonymous SNV . 0 22 hPsi_associated_SNPs_29798 0 0 0 0 0 chromatin 0.437978051339412 0.438448488742084 0.1363827 0 hPsi_site_23522 iPseU_CNN:0.1363827;iRNA_PseU:0 23523 chr10 46999996 46999996 1 + G A SKCM 46999995 + 46999975 47000015 41 GGTAACTCTGGGGTCCAGCCTGGAGGAGGTGCCGTCCCCTG GGTAACTCTGGGGTCCAGCCTAGAGGAGGTGCCGTCCCCTG < 41bp 0.404127359708065 0.820949153808429 0.2470214 0.44159698 prediction 0.641898307616858 Functional Gain - GPRIN2 ENSG00000204175 CDS Human protein_coding chr10:46999995 chr10:46999996 synonymous SNV . 0 22 hPsi_associated_SNPs_29799 0 0 0 0 0 exosome 0.43871856264877 0.438718606149409 0 0 hPsi_site_23523 iPseU_CNN:0;iRNA_PseU:0 23524 chr12 20890085 20890085 1 + G A LUSC 20890084 + 20890064 20890104 41 AACGAGCTCTCTTTTCAGATTGCAACTCAAGATGCAAATGT AACGAGCTCTCTTTTCAGATTACAACTCAAGATGCAAATGT < 41bp 0.414258799541563 0.820940874241206 0.2719508 0.47315457 prediction 0.641881748482413 Functional Gain - SLCO1C1 ENSG00000139155 CDS Human protein_coding chr12:20890084 chr12:20890085 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29800 0 0 0 0 1 nucleus 0.43882246100969 0.438684960706674 0 0 hPsi_site_23524 iPseU_CNN:0;iRNA_PseU:0 23525 chr5 5262872 5262872 1 + G A UCEC 5262871 + 5262851 5262891 41 CTGTCACGGGGCTGGTGCCTTGCAAAGTATCTGCCTGTCCT CTGTCACGGGGCTGGTGCCTTACAAAGTATCTGCCTGTCCT < 41bp 0.406983594216268 0.820940415816103 0.32925588 0.63073766 prediction 0.641880831632205 Functional Gain - ADAMTS16 ENSG00000145536 CDS Human protein_coding chr5:5262871 chr5:5262872 nonsynonymous SNV 0.052 4 22 hPsi_associated_SNPs_29801 0 0 0 0 1 exosome 0.438728556418454 0.438737209245063 0.26147532 0 hPsi_site_23525 iPseU_CNN:0.26147532;iRNA_PseU:0 23526 chr5 125971767 125971767 1 + C A UCEC 125971766 + 125971746 125971786 41 ATACTGGCCCTTTAGAAGACTCTCTGTTTTTGAATCACAGT ATACTGGCCCTTTAGAAGACTATCTGTTTTTGAATCACAGT < 41bp 0.533414460771131 0.854354307262344 0.3033709 0.3562216 prediction 0.641879692982426 Functional Gain - TEX43 ENSG00000196900 CDS Human protein_coding chr5:125971766 chr5:125971767 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_29802 0 0 0 0 1 unknown 0.438718468679115 0.43873558640763 0 0 hPsi_site_23526 iPseU_CNN:0;iRNA_PseU:0 23527 chr10 127677183 127677183 1 + G A HNSC 127677182 + 127677162 127677202 41 GACGCTGTACAGATTTCGCCTGAAGGTCACCAGCCCCTCTG GACGCTGTACAGATTTCGCCTAAAGGTCACCAGCCCCTCTG < 41bp 0.40411836466848 0.82093930699839 0.3151799 0.43604285 prediction 0.64187861399678 Functional Gain - FANK1 ENSG00000203780 CDS Human protein_coding chr10:127677182 chr10:127677183 synonymous SNV . 0 22 hPsi_associated_SNPs_29803 0 0 0 0 2 exosome 0.438718488407246 0.438718594350602 0 0 hPsi_site_23527 iPseU_CNN:0;iRNA_PseU:0 23528 chr4 189068092 189068092 1 + G A LIHC 189068091 + 189068071 189068111 41 CCCGACAACCCGGAAAGATTTGACCAGTCTGCGACTGTGCT CCCGACAACCCGGAAAGATTTAACCAGTCTGCGACTGTGCT < 41bp 0.404255572177769 0.8209380004452 0.25071758 0.41687065 prediction 0.6418760008904 Functional Gain - TRIML1 ENSG00000184108 CDS Human protein_coding chr4:189068091 chr4:189068092 nonsynonymous SNV 0.913 2 22 hPsi_associated_SNPs_29804 0 0 0 0 0 nucleus 0.438719290797537 0.438718528492147 0 0 hPsi_site_23528 iPseU_CNN:0;iRNA_PseU:0 23529 chr4 39436051 39436051 1 + C A UCEC 39436050 + 39436030 39436070 41 GGGGATGAGAAAGAAGTTGTTCTCCGTTCTACCCATTTTCT GGGGATGAGAAAGAAGTTGTTATCCGTTCTACCCATTTTCT < 41bp 0.450637468029274 0.820937223950143 0.3638537 0.7567636 prediction 0.641874447900287 Functional Gain - KLB ENSG00000134962 CDS Human protein_coding chr4:39436050 chr4:39436051 nonsynonymous SNV 0.005 0 22 hPsi_associated_SNPs_29805 0 0 1 0 0 Cytosol 0.4387185929951 0.438718592995102 0.5135272 0 hPsi_site_23529 iPseU_CNN:0.5135272;iRNA_PseU:0 23530 chr7 143792386 143792386 1 + G A SARC 143792385 + 143792365 143792405 41 CACACCCATGTATGTCTTCCTGTCACACCTGGCCATTGTGG CACACCCATGTATGTCTTCCTATCACACCTGGCCATTGTGG < 41bp 0.431608296991005 0.820933906891796 0.17705837 0.27832043 prediction 0.641867813783592 Functional Gain - OR2A12 ENSG00000221858 CDS Human protein_coding chr7:143792385 chr7:143792386 synonymous SNV . 0 22 hPsi_associated_SNPs_29806 0 0 0 0 0 unknown 0.439716864344421 0.434955023204351 0 0 hPsi_site_23530 iPseU_CNN:0;iRNA_PseU:0 23531 chr22 24123201 24123201 1 + G T BLCA 24123200 + 24123180 24123220 41 AGGGGCGTTCAACACCTATATGGCCAGCCCTGGCCCACTGT AGGGGCGTTCAACACCTATATTGCCAGCCCTGGCCCACTGT < 41bp 0.495354552237464 0.820930836839098 0.18250215 0.23458606 prediction 0.641861673678195 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24123200 chr22:24123201 nonsynonymous SNV 0.805 4 22 hPsi_associated_SNPs_29807 0 0 0 0 1 Endoplasmic reticulum 0.438718592995102 0.438718592996942 0 0 hPsi_site_23531 iPseU_CNN:0;iRNA_PseU:0 23532 chr7 63538063 63538063 1 + C A UCEC 63538062 + 63538042 63538082 41 TGGCAAAGCCTGTAAAAAGTTCTCAAACCTTACTGAACATA TGGCAAAGCCTGTAAAAAGTTATCAAACCTTACTGAACATA < 41bp 0.470375347482037 0.820930117574271 0.43056414 0.6672089 prediction 0.641860235148543 Functional Gain - ZNF727 ENSG00000257482 CDS Human other chr7:63538062 chr7:63538063 nonsynonymous SNV 0.533 0 22 hPsi_associated_SNPs_29808 0 0 0 0 0 exosome 0.438722185033529 0.43871207634258 0.3344178 0 hPsi_site_23532 iPseU_CNN:0.3344178;iRNA_PseU:0 23533 chr19 58101659 58101659 1 + C A UCS 58101658 + 58101638 58101678 41 ATATGTGAAGTGCTGCCTATTCTGTATGTCATTGAAGCCCT ATATGTGAAGTGCTGCCTATTATGTATGTCATTGAAGCCCT < 41bp 0.541638467424831 0.862563279870826 0.26337487 0.4685458 prediction 0.64184962489199 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101658 chr19:58101659 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_29809 0 0 1 0 0 exosome 0.438718606426346 0.438834465204998 0 0 hPsi_site_23533 iPseU_CNN:0;iRNA_PseU:0 23534 chr1 2116102 2116102 1 + C T STAD 2116103 - 2116083 2116123 41 CAGCTGCACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTGT CAGCTGCACGGGCTCGCTGGTAAACTGTGTGTCAAAGTTGT < 41bp 0.577258423144044 0.89818232667569 0.34420842 0.6616521 prediction 0.641847807063292 Functional Gain - PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2116103 chr1:2116102 synonymous SNV . 0 22 hPsi_associated_SNPs_29810 0 0 1 0 0 Ribosome 0.438717672586578 0.438714558339412 0.3233042 0 hPsi_site_23534 iPseU_CNN:0.3233042;iRNA_PseU:0 23535 chr10 102222964 102222964 1 + C A GBM 102222963 + 102222943 102222983 41 TTCTGTGTACATCTGTCTTTTCACCTGTGTCCTCCAACTCA TTCTGTGTACATCTGTCTTTTAACCTGTGTCCTCCAACTCA < 41bp 0.534535657251756 0.855455642919568 0.22487566 0.3776896 prediction 0.641839971335623 Functional Gain - WNT8B ENSG00000075290 CDS Human protein_coding chr10:102222963 chr10:102222964 nonsynonymous SNV 0.637 0 22 hPsi_associated_SNPs_29811 0 0 0 0 1 exosome 0.438718681474293 0.438717582911465 0 0 hPsi_site_23535 iPseU_CNN:0;iRNA_PseU:0 23536 chr13 32527237 32527237 1 + G A THCA 32527236 + 32527216 32527256 41 GGCCAAGAAGCCCGCGCTGGTGGCCAAGTCCTCCATCCTGC GGCCAAGAAGCCCGCGCTGGTAGCCAAGTCCTCCATCCTGC < 41bp 0.434902316310178 0.820919877108696 0.27461803 0.43332383 prediction 0.641839754217392 Functional Gain - EEF1DP3 ENSG00000229715 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr13:32527236 chr13:32527237 . . 0 22 hPsi_associated_SNPs_29812 0 0 0 0 0 unknown 0.438718563048957 0.438718592995101 0 0 hPsi_site_23536 iPseU_CNN:0;iRNA_PseU:0 23537 chr11 55890322 55890322 1 + C A BLCA 55890321 + 55890301 55890341 41 TGGCTTTATGGACTCCTTTGTCAATGTGGTTTCCATGAGCA TGGCTTTATGGACTCCTTTGTAAATGTGGTTTCCATGAGCA < 41bp 0.475469998174611 0.820919542153371 0.28205132 0.6759893 prediction 0.641839084306742 Functional Gain - OR8H3 ENSG00000181761 CDS Human protein_coding chr11:55890321 chr11:55890322 synonymous SNV . 0 22 hPsi_associated_SNPs_29813 0 0 0 0 0 unknown 0.438716748008804 0.438718086436352 0.3519786 0 hPsi_site_23537 iPseU_CNN:0.3519786;iRNA_PseU:0 23538 chr12 57858576 57858576 1 + C A rs139570630 57858575 + 57858555 57858595 41 TTATCCGCACCTCACCCAGCTCCCTCGTAGCTTTCATCAAC TTATCCGCACCTCACCCAGCTACCTCGTAGCTTTCATCAAC < 41bp 0.556240040529215 0.877158908210538 0.17666563 0.30471954 prediction 0.641837735362647 Functional Gain - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57858575 chr12:57858576 nonsynonymous SNV 0.989 4 22 hPsi_associated_SNPs_29814 0 0 0 0 1 nucleoplasm 0.438013662479865 0.438786519459292 0 0 hPsi_site_23538 iPseU_CNN:0;iRNA_PseU:0 23539 chr3 9784724 9784724 1 + G A CESC 9784723 + 9784703 9784743 41 TACCTGAATTTTGATGATTTTGAGGAGGACTTCAACCTCAT TACCTGAATTTTGATGATTTTAAGGAGGACTTCAACCTCAT < 41bp 0.40610816722325 0.820917844614133 0.3269663 0.4092025 prediction 0.641835689228266 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9784723 chr3:9784724 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29815 0 0 1 0 1 Nucleus 0.438698627387662 0.438718647505715 0 0 hPsi_site_23539 iPseU_CNN:0;iRNA_PseU:0 23540 chr11 4510786 4510786 1 + C A COAD 4510785 + 4510765 4510805 41 ACCTGCTCTTTGTTATCCTGTCTTATGTCTTCATCCTTCAG ACCTGCTCTTTGTTATCCTGTATTATGTCTTCATCCTTCAG < 41bp 0.536849974912348 0.857751069448235 0.38436487 0.6955067 prediction 0.641802189071773 Functional Gain - OR52K1 ENSG00000196778 CDS Human protein_coding chr11:4510785 chr11:4510786 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_29816 0 0 0 0 0 exosome 0.438718588985338 0.438741038506637 0.3910134 0 hPsi_site_23540 iPseU_CNN:0.3910134;iRNA_PseU:0 23541 chr10 102684380 102684380 1 + C A rs10883563 102684379 + 102684359 102684399 41 ATGTATCTTCAGGGAAAATTTCTGGGGGACCTTTGCGCTCA ATGTATCTTCAGGGAAAATTTATGGGGGACCTTTGCGCTCA < 41bp 0.443870467994451 0.820898370218644 0.43296558 0.56267893 prediction 0.641796740437288 Functional Gain - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684379 chr10:102684380 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29817 0 0 1 0 0 Nucleus 0.438718592658189 0.43871859162481 0.12535786 0 hPsi_site_23541 iPseU_CNN:0.12535786;iRNA_PseU:0 23542 chr21 46021159 46021159 1 + G A LUSC 46021158 + 46021138 46021178 41 TCAGCTCCTGCACGCCCTCGTGCTGCCAGCAGTCTAGCTGC TCAGCTCCTGCACGCCCTCGTACTGCCAGCAGTCTAGCTGC < 41bp 0.422046148837832 0.820889251495082 0.18976128 0.35275245 prediction 0.641778502990164 Functional Gain - KRTAP10-7 ENSG00000205441 CDS Human other chr21:46021158 chr21:46021159 nonsynonymous SNV 0.501 0 22 hPsi_associated_SNPs_29818 0 0 0 0 0 unknown 0.43867032577311 0.438655148794682 0 0 hPsi_site_23542 iPseU_CNN:0;iRNA_PseU:0 23543 chr19 50212075 50212075 1 + G A LUAD 50212074 + 50212054 50212094 41 ACTACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGACC ACTACCCCAGCCCCAGCGGCTACAATGGGACCTTCCAGACC < 41bp 0.586817833709301 0.907698201348617 0.25836924 0.47920427 prediction 0.641760735278632 Functional Gain - CPT1C ENSG00000169169 CDS Human protein_coding chr19:50212074 chr19:50212075 synonymous SNV . 0 22 hPsi_associated_SNPs_29819 0 0 0 0 2 exosome 0.438718377808875 0.438710089841356 0 0 hPsi_site_23543 iPseU_CNN:0;iRNA_PseU:0 23544 chr19 57888566 57888566 1 + C A BLCA 57888565 + 57888545 57888585 41 TTCTGTAGGAGTGTCACAGGTCATGGCTCCAAAGCCCTGTC TTCTGTAGGAGTGTCACAGGTAATGGCTCCAAAGCCCTGTC < 41bp 0.465930529203097 0.820879287001308 0.20185325 0.5961296 prediction 0.641758574002615 Functional Gain - ZNF547 ENSG00000152433 CDS Human protein_coding chr19:57888565 chr19:57888566 synonymous SNV . 0 22 hPsi_associated_SNPs_29820 0 0 0 0 1 exosome 0.438049762155144 0.43870230192569 0.1922592 0 hPsi_site_23544 iPseU_CNN:0.1922592;iRNA_PseU:0 23545 chr1 170521294 170521294 1 + G A UCEC 170521293 + 170521273 170521313 41 GCTCCGAAAGGCCAAGAAGTTGGAGGAGTTGATGCAACAAC GCTCCGAAAGGCCAAGAAGTTAGAGGAGTTGATGCAACAAC < 41bp 0.576874244397274 0.897749006455108 0.265747 0.6290317 prediction 0.64174952411567 Functional Gain - GORAB ENSG00000120370 CDS Human protein_coding chr1:170521293 chr1:170521294 synonymous SNV . 0 22 hPsi_associated_SNPs_29821 0 0 0 0 0 Cytosol 0.438733857875949 0.437227271777449 0.2580634 0 hPsi_site_23545 iPseU_CNN:0.2580634;iRNA_PseU:0 23546 chr11 5510498 5510498 1 + G A ACC 5510497 + 5510477 5510517 41 TACTGTGAGCATATGGGCATTGCCCGACTGGCCTGTGCCAA TACTGTGAGCATATGGGCATTACCCGACTGGCCTGTGCCAA < 41bp 0.572864744772596 0.893738220580906 0.1506854 0.3258099 prediction 0.64174695161662 Functional Gain - OR52D1 ENSG00000181609 CDS Human protein_coding chr11:5510497 chr11:5510498 nonsynonymous SNV 0.825 4 22 hPsi_associated_SNPs_29822 0 0 0 0 0 chromatin 0.438716806298348 0.438724973193018 0 0 hPsi_site_23546 iPseU_CNN:0;iRNA_PseU:0 23547 chr12 55524017 55524017 1 + G A UCEC 55524016 + 55523996 55524036 41 TATTGCCATCTGCAACCCTCTGCTCTACTCTGTTCAAATGT TATTGCCATCTGCAACCCTCTACTCTACTCTGTTCAAATGT < 41bp 0.421207630224981 0.820871868047112 0.5015924 0.85786664 prediction 0.641743736094224 Functional Gain - OR9K2 ENSG00000170605 CDS Human protein_coding chr12:55524016 chr12:55524017 synonymous SNV . 0 22 hPsi_associated_SNPs_29823 0 0 0 0 0 unknown 0.438814851699903 0.440863659298039 0.71254848 0 hPsi_site_23547 iPseU_CNN:0.71254848;iRNA_PseU:0 23548 chr15 51984505 51984505 1 + C A rs553939656 51984504 + 51984484 51984524 41 ACTCCAATATTTCCCAAATTTCTATGCGCTACTGAAAAGTA ACTCCAATATTTCCCAAATTTATATGCGCTACTGAAAAGTA < 41bp 0.522243692753918 0.843106948898945 0.5618802 0.40496823 prediction 0.641726512290055 Functional Gain - SCG3 ENSG00000104112 CDS Human protein_coding chr15:51984504 chr15:51984505 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_29824 0 0 0 0 1 nucleolus 0.438718661497481 0.438650850466053 0 0 hPsi_site_23548 iPseU_CNN:0;iRNA_PseU:0 23549 chr14 20248835 20248835 1 + G A LUSC 20248834 + 20248814 20248854 41 GATGTTCTTGCTCACAGTGATGGCCTATGACCGCTATGCTG GATGTTCTTGCTCACAGTGATAGCCTATGACCGCTATGCTG < 41bp 0.426840459110839 0.820862332417781 0.20987886 0.39799875 prediction 0.641724664835561 Functional Gain - OR4M1 ENSG00000176299 CDS Human protein_coding chr14:20248834 chr14:20248835 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29825 0 0 0 0 0 unknown 0.439026755200198 0.438734556134449 0 0 hPsi_site_23549 iPseU_CNN:0;iRNA_PseU:0 23550 chr11 2424486 2424486 1 + G A COAD 2424485 + 2424465 2424505 41 TCAACCAGGATCCCTCCAGCTGTGGGGAGGGGAGGGTCATC TCAACCAGGATCCCTCCAGCTATGGGGAGGGGAGGGTCATC < 41bp 0.402044148810431 0.820861926323526 0.24119118 0.33109406 prediction 0.641723852647052 Functional Gain - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424485 chr11:2424486 nonsynonymous SNV 0.951 1 22 hPsi_associated_SNPs_29826 0 0 1 0 0 Ribosome 0.438719060528074 0.438719144262381 0 0 hPsi_site_23550 iPseU_CNN:0;iRNA_PseU:0 23551 chr17 43182277 43182277 1 + C A HNSC 43182276 + 43182256 43182296 41 TCTCATGGAGAACAAAACCTTCCTGGAGAAGCTCAAGTTTG TCTCATGGAGAACAAAACCTTACTGGAGAAGCTCAAGTTTG < 41bp 0.452486329362452 0.820861293193909 0.42591354 0.8647846 prediction 0.641722586387819 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43182276 chr17:43182277 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29827 0 0 1 0 2 Ribosome 0.438718565887701 0.438718497701193 0.7295692 0 hPsi_site_23551 iPseU_CNN:0.7295692;iRNA_PseU:0 23552 chr1 155403848 155403848 1 + G A rs16865367 155403847 + 155403827 155403867 41 AAGCAATCAAGCAGCGACTATGCATAACGAGAGGATTTTGA AAGCAATCAAGCAGCGACTATACATAACGAGAGGATTTTGA < 41bp 0.449285300894157 0.820859141109027 0.30750456 0.61697096 prediction 0.641718282218054 Functional Gain - POU5F1P4 ENSG00000237872 ncRNA_exonic Human processed_pseudogene chr1:155403847 chr1:155403848 . . 0 22 hPsi_associated_SNPs_29828 0 0 0 0 0 unknown 0.438718099225992 0.438718392317732 0.23394192 0 hPsi_site_23552 iPseU_CNN:0.23394192;iRNA_PseU:0 23553 chr12 55523745 55523745 1 + C A LUSC 55523744 + 55523724 55523764 41 TTTGTTTATGCCATGATCCTTCTAGGGAATGTTGGGATGAT TTTGTTTATGCCATGATCCTTATAGGGAATGTTGGGATGAT < 41bp 0.486812758402681 0.820855717182746 0.23806384 0.28107065 prediction 0.641711434365491 Functional Gain - OR9K2 ENSG00000170605 CDS Human protein_coding chr12:55523744 chr12:55523745 nonsynonymous SNV 0.821 0 22 hPsi_associated_SNPs_29829 0 0 0 0 0 unknown 0.438702672722618 0.438718679960235 0 0 hPsi_site_23553 iPseU_CNN:0;iRNA_PseU:0 23554 chrX 55650390 55650390 1 + G A LGG 55650389 + 55650369 55650409 41 ACCCAATCTGTGGATGTGGGTGGACCCCAATATCCTGTGCC ACCCAATCTGTGGATGTGGGTAGACCCCAATATCCTGTGCC < 41bp 0.411054509777051 0.820844101276465 0.2785763 0.69644856 prediction 0.64168820255293 Functional Gain - FOXR2 ENSG00000189299 CDS Human protein_coding chrX:55650389 chrX:55650390 synonymous SNV . 0 22 hPsi_associated_SNPs_29830 0 0 0 0 0 unknown 0.438837289565899 0.438711950930163 0.39289712 0 hPsi_site_23554 iPseU_CNN:0.39289712;iRNA_PseU:0 23555 chr19 12969450 12969450 1 + G A LIHC 12969449 + 12969429 12969469 41 CCAGATCCAGCAGGCCTTTGTGGAGCGCGATATCCTCACCT CCAGATCCAGCAGGCCTTTGTAGAGCGCGATATCCTCACCT < 41bp 0.393443843254249 0.820842700846636 0.5324193 0.8123368 prediction 0.641685401693273 Functional Gain - MAST1 ENSG00000105613 CDS Human protein_coding chr19:12969449 chr19:12969450 synonymous SNV . 0 22 hPsi_associated_SNPs_29831 0 0 0 0 0 Endoplasmic reticulum 0.438718596967109 0.43871921719445 0.559835 0 hPsi_site_23555 iPseU_CNN:0.559835;iRNA_PseU:0 23556 chr11 7531133 7531133 1 + G A BLCA 7531132 + 7531112 7531152 41 CACTGGGAGTGGAGCATTCATGGGATACCCCATGCAGAAGC CACTGGGAGTGGAGCATTCATAGGATACCCCATGCAGAAGC < 41bp 0.415974533455831 0.820839716440601 0.20634606 0.25955737 prediction 0.641679432881203 Functional Gain - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7531132 chr11:7531133 stopgain 0.998 1 22 hPsi_associated_SNPs_29832 0 0 0 0 0 exosome 0.438718607281473 0.438718598104749 0 0 hPsi_site_23556 iPseU_CNN:0;iRNA_PseU:0 23557 chr14 62233990 62233990 1 + G A UCEC 62233989 + 62233969 62234009 41 TTTCAGCAAGATTTAGTAAATGCACAGCATTTTGATGCAGC TTTCAGCAAGATTTAGTAAATACACAGCATTTTGATGCAGC < 41bp 0.427481004482913 0.820838672970043 0.34241354 0.3757623 prediction 0.641677345940086 Functional Gain - SNAPC1 ENSG00000023608 CDS Human protein_coding chr14:62233989 chr14:62233990 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29833 0 0 1 0 2 chromatin 0.438810791151496 0.438647988988475 0 0 hPsi_site_23557 iPseU_CNN:0;iRNA_PseU:0 23558 chr1 32669616 32669616 1 + G T CESC 32669615 + 32669595 32669635 41 GGACTCCTGAACCTGCTCAATGATTTCCACTCTGGCCGGCT GGACTCCTGAACCTGCTCAATTATTTCCACTCTGGCCGGCT < 41bp 0.489189699584564 0.820836438055571 0.23731408 0.47785208 prediction 0.641672876111141 Functional Gain - CCDC28B ENSG00000160050 CDS Human protein_coding chr1:32669615 chr1:32669616 nonsynonymous SNV 0.961 4 22 hPsi_associated_SNPs_29834 0 0 1 0 1 Ribosome 0.43871864929545 0.43871859289185 0 0 hPsi_site_23558 iPseU_CNN:0;iRNA_PseU:0 23559 chrX 22291388 22291388 1 + C A UCEC 22291387 + 22291367 22291407 41 AAAGTCGGATATAAAGTATGTCCGCGCTGTCGTTATCCTGT AAAGTCGGATATAAAGTATGTACGCGCTGTCGTTATCCTGT < 41bp 0.469303944901002 0.820834191003665 0.1239931 0.6512495 prediction 0.64166838200733 Functional Gain - ZNF645 ENSG00000175809 CDS Human protein_coding chrX:22291387 chrX:22291388 nonsynonymous SNV 0.140 1 22 hPsi_associated_SNPs_29835 0 0 0 0 0 unknown 0.438718675775387 0.438703734419593 0.302499 0 hPsi_site_23559 iPseU_CNN:0.302499;iRNA_PseU:0 23560 chr17 42085843 42085843 1 + C A COAD 42085842 + 42085822 42085862 41 CAAACACAGTGATGGCAGCTTCTCCAACAAGCAGTGGATCT CAAACACAGTGATGGCAGCTTATCCAACAAGCAGTGGATCT < 41bp 0.53269492057586 0.853528190584703 0.21235272 0.39040288 prediction 0.641666540017686 Functional Gain - NAGS ENSG00000161653 CDS Human protein_coding chr17:42085842 chr17:42085843 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29836 0 0 0 0 1 Cytosol 0.438762792002823 0.438717936115914 0 0 hPsi_site_23560 iPseU_CNN:0;iRNA_PseU:0 23561 chr19 44470198 44470198 1 + G A LUSC 44470197 + 44470177 44470217 41 TGTAAACAGTCCTTCAGTGATGTTTCTGTCTTTGATCTTCA TGTAAACAGTCCTTCAGTGATATTTCTGTCTTTGATCTTCA < 41bp 0.426906686048061 0.820827848601704 0.39670116 0.6361664 prediction 0.641655697203407 Functional Gain - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470197 chr19:44470198 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_29837 0 0 1 0 0 exosome 0.438236186516173 0.438382349600224 0.2723328 0 hPsi_site_23561 iPseU_CNN:0.2723328;iRNA_PseU:0 23562 chr1 28661017 28661017 1 + G A CESC 28661016 + 28660996 28661036 41 CCTGAGACTTTCCTTGACCATGAGATGGTATTCCTCCTTAA CCTGAGACTTTCCTTGACCATAAGATGGTATTCCTCCTTAA < 41bp 0.420174243442509 0.820826472281116 0.22622788 0.25149304 prediction 0.641652944562232 Functional Gain - MED18 ENSG00000130772 CDS Human protein_coding chr1:28661016 chr1:28661017 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29838 0 0 1 0 1 Ribosome 0.438781728216164 0.438727226717264 0 0 hPsi_site_23562 iPseU_CNN:0;iRNA_PseU:0 23563 chr10 134218802 134218802 1 + G T rs76160300 134218801 + 134218781 134218821 41 GCCCCAGGGCAAGGGAGAGGTGGTCAAGATCCCCTCCCGCG GCCCCAGGGCAAGGGAGAGGTTGTCAAGATCCCCTCCCGCG < 41bp 0.489319631520502 0.820825502132706 0.2715811 0.6006919 prediction 0.641651004265412 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134218801 chr10:134218802 synonymous SNV . 0 22 hPsi_associated_SNPs_29839 0 0 0 0 0 chromatin 0.438950775255535 0.438718598131446 0.2013838 0 hPsi_site_23563 iPseU_CNN:0.2013838;iRNA_PseU:0 23564 chr13 21172793 21172793 1 + C A UCEC 21172792 + 21172772 21172812 41 TAATATTTTCTTCCTTAGGTTCTTTTCAATTTGGCCAGTCA TAATATTTTCTTCCTTAGGTTATTTTCAATTTGGCCAGTCA < 41bp 0.476741990005667 0.820820751826239 0.22159418 0.30282992 prediction 0.641641503652478 Functional Gain - IFT88 ENSG00000032742 CDS Human protein_coding chr13:21172792 chr13:21172793 nonsynonymous SNV 0.990 2 22 hPsi_associated_SNPs_29840 0 0 0 0 2 Cytosol 0.438818747553243 0.438720738729954 0 0 hPsi_site_23564 iPseU_CNN:0;iRNA_PseU:0 23565 chr3 141161333 141161333 1 + G A BLCA 141161332 + 141161312 141161352 41 ATTCGGGGCATTTTATGCGATGTCACTATCATTGTGGAAGA ATTCGGGGCATTTTATGCGATATCACTATCATTGTGGAAGA < 41bp 0.426175132443764 0.820819440873577 0.15923068 0.18960157 prediction 0.641638881747155 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161332 chr3:141161333 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29841 0 0 1 0 0 chromatin 0.440079505167016 0.438715460082588 0 0 hPsi_site_23565 iPseU_CNN:0;iRNA_PseU:0 23566 chr12 55794749 55794749 1 + C A LUSC 55794748 + 55794728 55794768 41 GTAATTGGCTTGTAATCAGCTCCTGGCTGGCTGGTTTTCTC GTAATTGGCTTGTAATCAGCTACTGGCTGGCTGGTTTTCTC < 41bp 0.482018741823467 0.820817161897088 0.19634563 0.43127397 prediction 0.641634323794176 Functional Gain - OR6C65 ENSG00000205328 CDS Human protein_coding chr12:55794748 chr12:55794749 nonsynonymous SNV 0.000 1 22 hPsi_associated_SNPs_29842 0 0 0 0 0 unknown 0.437882547577542 0.436421484142975 0 0 hPsi_site_23566 iPseU_CNN:0;iRNA_PseU:0 23567 chr9 134019932 134019932 1 + C A HNSC 134019931 + 134019911 134019951 41 AGGCCCTGGCCCATCAACCTTCTCTTTTGTTCCCCCTTCTA AGGCCCTGGCCCATCAACCTTATCTTTTGTTCCCCCTTCTA < 41bp 0.544659543670019 0.865475710042745 0.3540071 0.37771687 prediction 0.641632332745453 Functional Gain - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134019931 chr9:134019932 nonsynonymous SNV 0.907 3 22 hPsi_associated_SNPs_29843 0 0 1 0 0 Cytosol 0.438737559870925 0.438718594459768 0 0 hPsi_site_23567 iPseU_CNN:0;iRNA_PseU:0 23568 chr20 30070271 30070271 1 + G A UCEC 30070270 + 30070250 30070290 41 ACAAGGCAGACTTGGCCCGCTGCCGAGAAGTCTCTGTGGAA ACAAGGCAGACTTGGCCCGCTACCGAGAAGTCTCTGTGGAA < 41bp 0.410351299629395 0.820813782052203 0.33229345 0.84888005 prediction 0.641627564104406 Functional Gain - REM1 ENSG00000088320 CDS Human protein_coding chr20:30070270 chr20:30070271 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29844 0 0 0 0 1 exosome 0.438720534353519 0.438718602060579 0.6977601 0 hPsi_site_23568 iPseU_CNN:0.6977601;iRNA_PseU:0 23569 chr1 168165856 168165856 1 + G A BRCA 168165855 + 168165835 168165875 41 TGATGGGGTGCTTATCAGAATGAATGACACGAGACTTTACC TGATGGGGTGCTTATCAGAATAAATGACACGAGACTTTACC < 41bp 0.460324039292794 0.820812118409385 0.14233175 0.18496189 prediction 0.64162423681877 Functional Gain - TIPRL ENSG00000143155 CDS Human protein_coding chr1:168165855 chr1:168165856 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29845 0 0 1 0 2 Ribosome 0.438718592790196 0.438718787011701 0 0 hPsi_site_23569 iPseU_CNN:0;iRNA_PseU:0 23570 chr8 104452400 104452400 1 + C A UCEC 104452399 + 104452379 104452419 41 AAAGAGAATGCAACATGTTATCTGTGTAAAATGGACTTCTG AAAGAGAATGCAACATGTTATATGTGTAAAATGGACTTCTG < 41bp 0.547596296846667 0.868407160437592 0.3229055 0.45666358 prediction 0.641621727181849 Functional Gain - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104452399 chr8:104452400 synonymous SNV . 0 22 hPsi_associated_SNPs_29846 0 0 1 0 1 Nucleus 0.438004191566577 0.438656415943381 0 0 hPsi_site_23570 iPseU_CNN:0;iRNA_PseU:0 23571 chr12 132380201 132380201 1 + C A COAD 132380200 + 132380180 132380220 41 ACAAGAAGAACCTCGCCAAGTCTCAGACGCTGCTGGGGAAG ACAAGAAGAACCTCGCCAAGTATCAGACGCTGCTGGGGAAG < 41bp 0.454005534269703 0.82080817543042 0.3901682 0.88079405 prediction 0.641616350860839 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132380200 chr12:132380201 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_29847 0 0 1 0 2 Cytosol 0.441066199121156 0.438587613870048 0.7615881 0 hPsi_site_23571 iPseU_CNN:0.7615881;iRNA_PseU:0 23572 chr17 63221501 63221501 1 + G A STAD 63221500 + 63221480 63221520 41 TGTCTGGCCTCACCTGTCTTTGCCAGGCTCTCACCCAAGTG TGTCTGGCCTCACCTGTCTTTACCAGGCTCTCACCCAAGTG < 41bp 0.588312069386294 0.909116708799738 0.2692416 0.7639193 prediction 0.641609278826889 Functional Gain - RGS9 ENSG00000108370 CDS Human protein_coding chr17:63221500 chr17:63221501 nonsynonymous SNV 0.983 4 22 hPsi_associated_SNPs_29848 0 0 0 0 0 exosome 0.438718644479552 0.438718597287397 0.5278386 0 hPsi_site_23572 iPseU_CNN:0.5278386;iRNA_PseU:0 23573 chr13 27256877 27256877 1 + G T LUAD 27256876 + 27256856 27256896 41 CCCATGCAGCCCCCGTTCCCTGCATCAGCCAGCTCCACGCA CCCATGCAGCCCCCGTTCCCTTCATCAGCCAGCTCCACGCA < 41bp 0.524203494041646 0.845003562532109 0.5172835 0.7026732 prediction 0.641600136980926 Functional Gain - WASF3 ENSG00000132970 CDS Human protein_coding chr13:27256876 chr13:27256877 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29849 0 0 1 0 0 cytosol 0.437841459503886 0.416364967867426 0.3707794 0 hPsi_site_23573 iPseU_CNN:0.3707794;iRNA_PseU:0 23574 chr20 31017708 31017708 1 + C A GBM 31017707 + 31017687 31017727 41 GAATGCTGTGCCTTCAGGGTTCTCGGGCTGCCACGCCGATG GAATGCTGTGCCTTCAGGGTTATCGGGCTGCCACGCCGATG < 41bp 0.546109050649844 0.866904268295776 0.34642124 0.5039683 prediction 0.641590435291864 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31017707 chr20:31017708 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29850 0 0 1 0 0 Nucleus 0.438737901771475 0.438702221032501 0.00793660000000007 0 hPsi_site_23574 iPseU_CNN:0.00793660000000007;iRNA_PseU:0 23575 chrX 48418877 48418877 1 + G A rs782151194 48418876 + 48418856 48418896 41 GAGGGACCCTCTGGTCCAGCTGCCCCACCCAGCTGCCCTTA GAGGGACCCTCTGGTCCAGCTACCCCACCCAGCTGCCCTTA < 41bp 0.402312794866464 0.820794851640848 0.16465849 0.3876412 prediction 0.641589703281697 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48418876 chrX:48418877 synonymous SNV . 0 22 hPsi_associated_SNPs_29851 0 0 0 0 0 nucleolus 0.438718614450711 0.438719277755537 0 0 hPsi_site_23575 iPseU_CNN:0;iRNA_PseU:0 23576 chrX 140985120 140985120 1 + G A BLCA 140985119 + 140985099 140985139 41 GACAACCACTCCTATTTCTTTGAAGACACATTAGACCTCAC GACAACCACTCCTATTTCTTTAAAGACACATTAGACCTCAC < 41bp 0.57410787048575 0.894900610791331 0.24853742 0.3361448 prediction 0.641585480611162 Functional Gain - MAGEC3 ENSG00000165509 CDS Human protein_coding chrX:140985119 chrX:140985120 nonsynonymous SNV 0.002 1 22 hPsi_associated_SNPs_29852 0 0 0 0 0 exosome 0.438712280356332 0.438718593144269 0 0 hPsi_site_23576 iPseU_CNN:0;iRNA_PseU:0 23577 chr13 37269344 37269344 1 + C A UCEC 37269343 + 37269323 37269363 41 CCACCTGTCAAACGTCTACATCTATGTGTCCATATTCCTCA CCACCTGTCAAACGTCTACATATATGTGTCCATATTCCTCA < 41bp 0.53958911914906 0.860378967846956 0.30020508 0.61103624 prediction 0.641579697395793 Functional Gain - SERTM1 ENSG00000180440 CDS Human protein_coding chr13:37269343 chr13:37269344 synonymous SNV . 0 22 hPsi_associated_SNPs_29853 0 0 0 0 0 exosome 0.438705820959077 0.438716518571372 0.22207248 0 hPsi_site_23577 iPseU_CNN:0.22207248;iRNA_PseU:0 23578 chr2 219292727 219292727 1 + G A LUSC 219292726 + 219292706 219292746 41 GGCTTCTGGCATGAAGCACGTGGAGACCAACTCCTATGACG GGCTTCTGGCATGAAGCACGTAGAGACCAACTCCTATGACG < 41bp 0.390262191835241 0.820789112116104 0.31575304 0.5767326 prediction 0.641578224232208 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219292726 chr2:219292727 synonymous SNV . 0 22 hPsi_associated_SNPs_29854 0 0 1 0 2 Nucleus 0.439902585645315 0.438495660997264 0.1534652 0 hPsi_site_23578 iPseU_CNN:0.1534652;iRNA_PseU:0 23579 chr7 111846782 111846782 1 + C A BLCA 111846781 + 111846761 111846801 41 TCTGCCGGGTAATGGCTGCTTCCAAGACCCAGGGGGCTGTC TCTGCCGGGTAATGGCTGCTTACAAGACCCAGGGGGCTGTC < 41bp 0.532900379820643 0.853688718848438 0.40075383 0.75590587 prediction 0.641576678055591 Functional Gain - ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111846781 chr7:111846782 nonsynonymous SNV 0.058 1 22 hPsi_associated_SNPs_29855 0 0 1 0 1 chromatin 0.438718643193311 0.438718641555325 0.51181174 0 hPsi_site_23579 iPseU_CNN:0.51181174;iRNA_PseU:0 23580 chr12 6647303 6647303 1 + G A LUSC 6647302 + 6647282 6647322 41 TGGCTACAGCAACAGGGTGGTGGACCTCATGGCCCACATGG TGGCTACAGCAACAGGGTGGTAGACCTCATGGCCCACATGG < 41bp 0.407572479934079 0.820787338444984 0.1860334 0.5958981 prediction 0.641574676889967 Functional Gain - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647302 chr12:6647303 synonymous SNV . 0 22 hPsi_associated_SNPs_29856 0 0 1 0 1 Ribosome 0.438718601175805 0.43871955576863 0.1917962 0 hPsi_site_23580 iPseU_CNN:0.1917962;iRNA_PseU:0 23581 chr7 127714603 127714603 1 + G T SKCM 127714602 + 127714582 127714622 41 AGGCCGGCAACTTTATCGGCTGGCTGCACATCGACGGTGCC AGGCCGGCAACTTTATCGGCTTGCTGCACATCGACGGTGCC < 41bp 0.49342426494672 0.820786640395747 0.5024185 0.7798771 prediction 0.641573280791494 Functional Gain - SND1 ENSG00000197157 CDS Human protein_coding chr7:127714602 chr7:127714603 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29857 0 0 1 0 1 Cytosol 0.438719934234634 0.438717690107455 0.5549172 0 hPsi_site_23581 iPseU_CNN:0.5549172;iRNA_PseU:0 23582 chr16 70349951 70349951 1 + G A UCEC 70349950 + 70349930 70349970 41 CACAAACCAAGTGGAAGTCCTGCAGCGGGATCCAAACTCCC CACAAACCAAGTGGAAGTCCTACAGCGGGATCCAAACTCCC < 41bp 0.398489268313014 0.820779396438827 0.53461266 0.8497186 prediction 0.641558792877654 Functional Gain - DDX19B ENSG00000157349;ENSG00000260537 CDS Human other chr16:70349950 chr16:70349951 synonymous SNV . 0 22 hPsi_associated_SNPs_29858 0 0 1 0 2 chromatin 0.438718906850731 0.438714637657843 0.63021188 0 hPsi_site_23582 iPseU_CNN:0.63021188;iRNA_PseU:0 23583 chr1 206318410 206318410 1 + C A UCEC 206318409 + 206318389 206318429 41 TAATTTGGACATGATCCAGTTCACCGAGTCCTGCTCAATGG TAATTTGGACATGATCCAGTTAACCGAGTCCTGCTCAATGG < 41bp 0.553099073189286 0.873877280596067 0.29228708 0.571919 prediction 0.641556414813562 Functional Gain - CTSE ENSG00000196188 CDS Human protein_coding chr1:206318409 chr1:206318410 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_29859 0 0 0 0 1 Endoplasmic reticulum 0.438718611108618 0.438718591871588 0.143838 0 hPsi_site_23583 iPseU_CNN:0.143838;iRNA_PseU:0 23584 chr5 140048308 140048308 1 + G T HNSC 140048307 + 140048287 140048327 41 GGAGGGCCCCTTAATGGATATGAGGCAACATGAAGAGTACA GGAGGGCCCCTTAATGGATATTAGGCAACATGAAGAGTACA < 41bp 0.525980750076141 0.846755422504395 0.2319512 0.38707483 prediction 0.64154934485651 Functional Gain - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140048307 chr5:140048308 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29860 0 0 1 0 1 Ribosome 0.438718588649093 0.438718593737391 0 0 hPsi_site_23584 iPseU_CNN:0;iRNA_PseU:0 23585 chr12 50503278 50503278 1 + G A rs34013306 50503277 + 50503257 50503297 41 GGGTGAATTCATCCACTGCCTGCAGAATCATCCAGAACATA GGGTGAATTCATCCACTGCCTACAGAATCATCCAGAACATA < 41bp 0.414585060450945 0.820760648839271 0.2545278 0.29828134 prediction 0.641521297678542 Functional Gain - GPD1 ENSG00000167588 CDS Human protein_coding chr12:50503277 chr12:50503278 synonymous SNV . 0 22 hPsi_associated_SNPs_29861 0 0 0 0 1 Cytosol 0.43871859288847 0.43871863878578 0 0 hPsi_site_23585 iPseU_CNN:0;iRNA_PseU:0 23586 chr11 4567107 4567107 1 + G A rs148578860 4567106 + 4567086 4567126 41 GATGATTTTCAGGGCCGTGATGGGGTTAGCCACTCCTGAGG GATGATTTTCAGGGCCGTGATAGGGTTAGCCACTCCTGAGG < 41bp 0.424365436509261 0.820759706277202 0.15091893 0.21541604 prediction 0.641519412554405 Functional Gain - OR52M1 ENSG00000197790 CDS Human protein_coding chr11:4567106 chr11:4567107 nonsynonymous SNV 0.979 1 22 hPsi_associated_SNPs_29862 0 0 0 0 0 unknown 0.4387185929271 0.438718592958313 0 0 hPsi_site_23586 iPseU_CNN:0;iRNA_PseU:0 23587 chr7 39730138 39730138 1 + G A LGG 39730137 + 39730117 39730157 41 GAAGTGGGGAGGGGTTCCTCTGTGTTTTCTCTATTACAGAA GAAGTGGGGAGGGGTTCCTCTATGTTTTCTCTATTACAGAA < 41bp 0.582686194102381 0.903441655738934 0.2788229 0.31807995 prediction 0.641510923273105 Functional Gain - RALA ENSG00000006451 CDS Human protein_coding chr7:39730137 chr7:39730138 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29863 0 0 1 0 1 Ribosome 0.438718593382839 0.438718593139481 0 0 hPsi_site_23587 iPseU_CNN:0;iRNA_PseU:0 23588 chr8 124453759 124453759 1 + G A rs542348895 124453758 + 124453738 124453778 41 GTACAGTTGGCTTGGAATTATGTCTTTCTCTTTTAATTTGA GTACAGTTGGCTTGGAATTATATCTTTCTCTTTTAATTTGA < 41bp 0.466596580468187 0.820754943498441 0.28625324 0.2778116 prediction 0.641509886996883 Functional Gain - WDYHV1 ENSG00000156795 UTR3 Human protein_coding chr8:124453758 chr8:124453759 . . 0 22 hPsi_associated_SNPs_29864 0 0 1 1 0 Ribosome 0.438718159109607 0.438718633636713 0 0 hPsi_site_23588 iPseU_CNN:0;iRNA_PseU:0 23589 chr7 150171609 150171609 1 + G A BLCA 150171608 + 150171588 150171628 41 AAGTGTAAAAACAGATATAGTGCCTTCAACTACCGGGCAAC AAGTGTAAAAACAGATATAGTACCTTCAACTACCGGGCAAC < 41bp 0.410228608361805 0.820754519374661 0.26813155 0.5102967 prediction 0.641509038749323 Functional Gain - GIMAP8 ENSG00000171115 CDS Human protein_coding chr7:150171608 chr7:150171609 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29865 0 0 0 0 0 cytosol 0.439391712376928 0.438779696997499 0.0205934000000001 0 hPsi_site_23589 iPseU_CNN:0.0205934000000001;iRNA_PseU:0 23590 chr12 56115585 56115585 1 + C A rs3138142 56115584 + 56115564 56115604 41 TGTGAACACAATGGGTCCCATCGGGGTCACCCTTGCCCTGC TGTGAACACAATGGGTCCCATAGGGGTCACCCTTGCCCTGC < 41bp 0.545330643164347 0.866083036968182 0.19438171 0.3380235 prediction 0.641504787607671 Functional Gain - RDH5 ENSG00000135437 CDS Human protein_coding chr12:56115584 chr12:56115585 synonymous SNV . 0 22 hPsi_associated_SNPs_29866 0 1 0 0 0 Cytosol 0.438697191211908 0.438718531065264 0 0 hPsi_site_23590 iPseU_CNN:0;iRNA_PseU:0 23591 chr2 233537084 233537084 1 + G T LUSC 233537083 + 233537063 233537103 41 GGACAGTGGGCTGATGGCGCTGGCAAAGCTTTCTGAGATCG GGACAGTGGGCTGATGGCGCTTGCAAAGCTTTCTGAGATCG < 41bp 0.475717359437339 0.820751511807314 0.3370961 0.4328591 prediction 0.641503023614628 Functional Gain - EFHD1 ENSG00000115468 CDS Human protein_coding chr2:233537083 chr2:233537084 synonymous SNV . 0 22 hPsi_associated_SNPs_29867 0 0 0 0 2 exosome 0.438736279980981 0.438811930166307 0 0 hPsi_site_23591 iPseU_CNN:0;iRNA_PseU:0 23592 chr5 36677181 36677181 1 + G T LUAD 36677180 + 36677160 36677200 41 GTCTAGTTGTCTTCTCCATGTGCTTCGGTTTTGTGATTGGA GTCTAGTTGTCTTCTCCATGTTCTTCGGTTTTGTGATTGGA < 41bp 0.510807302195842 0.831558715606255 0.20213604 0.31182215 prediction 0.641502826820826 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36677180 chr5:36677181 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29868 0 0 1 0 0 Endoplasmic reticulum 0.437925470793331 0.437887149386833 0 0 hPsi_site_23592 iPseU_CNN:0;iRNA_PseU:0 23593 chr10 99361706 99361706 1 + G T CESC 99361705 + 99361685 99361725 41 TGCACGGGGCAATGGGAAGATGCCCAGAAACTGCAGCACCG TGCACGGGGCAATGGGAAGATTCCCAGAAACTGCAGCACCG < 41bp 0.515812652159123 0.836558744214865 0.30692115 0.55781484 prediction 0.641492184111483 Functional Gain - HOGA1 ENSG00000155252;ENSG00000241935;ENSG00000249967 CDS Human other chr10:99361705 chr10:99361706 nonsynonymous SNV 0.995 5 22 hPsi_associated_SNPs_29869 0 0 0 0 2 nucleus 0.438796565408339 0.438718580624627 0.11562968 0 hPsi_site_23593 iPseU_CNN:0.11562968;iRNA_PseU:0 23594 chr3 97868571 97868571 1 + C A UCEC 97868570 + 97868550 97868590 41 TGTAACCACGGAATGTTTTCTCTTGGCAACAATGGCATATG TGTAACCACGGAATGTTTTCTATTGGCAACAATGGCATATG < 41bp 0.518344854091276 0.839090266628198 0.31013373 0.41852087 prediction 0.641490825073844 Functional Gain - OR5H14 ENSG00000236032 CDS Human protein_coding chr3:97868570 chr3:97868571 synonymous SNV . 0 22 hPsi_associated_SNPs_29870 0 0 0 0 0 unknown 0.439180263602779 0.438725373902434 0 0 hPsi_site_23594 iPseU_CNN:0;iRNA_PseU:0 23595 chr16 30964592 30964592 1 + G A BLCA 30964591 + 30964571 30964611 41 CAGTGCCTGCACCACCGTGCTGGTGGCTGTGCACCTCTTTG CAGTGCCTGCACCACCGTGCTAGTGGCTGTGCACCTCTTTG < 41bp 0.406897503737969 0.820745101129283 0.1866445 0.44630548 prediction 0.641490202258566 Functional Gain - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964591 chr16:30964592 synonymous SNV . 0 22 hPsi_associated_SNPs_29871 0 0 0 0 1 chromatin 0.436451379375483 0.439917284030827 0 0 hPsi_site_23595 iPseU_CNN:0;iRNA_PseU:0 23596 chr9 125487078 125487078 1 + G A SARC 125487077 + 125487057 125487097 41 TCTGTCCATGTACTCAGTGATGAAGGGCCGGGTAGCCACAG TCTGTCCATGTACTCAGTGATAAAGGGCCGGGTAGCCACAG < 41bp 0.43541299710919 0.820744838245133 0.22780907 0.34327197 prediction 0.641489676490265 Functional Gain - OR1L4 ENSG00000136939 CDS Human protein_coding chr9:125487077 chr9:125487078 nonsynonymous SNV 0.225 0 22 hPsi_associated_SNPs_29872 0 0 0 0 0 unknown 0.438718307328893 0.438718607486405 0 0 hPsi_site_23596 iPseU_CNN:0;iRNA_PseU:0 23597 chr19 36362632 36362632 1 + C A KIRC 36362631 + 36362611 36362651 41 CTCCAGGGACCCCCGACCCATCTGGGACAGCAGTTGGGTGA CTCCAGGGACCCCCGACCCATATGGGACAGCAGTTGGGTGA < 41bp 0.445255207238879 0.820743935084823 0.23644647 0.25915205 prediction 0.641487870169647 Functional Gain - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36362631 chr19:36362632 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_29873 0 0 0 0 1 Endoplasmic reticulum 0.438718624008776 0.438718599964331 0 0 hPsi_site_23597 iPseU_CNN:0;iRNA_PseU:0 23598 chr1 155292686 155292686 1 + C A LIHC 155292685 + 155292665 155292705 41 AGTCACCACCTTCAAGGAACTCCGGTCCCGAAGCCGGGCCC AGTCACCACCTTCAAGGAACTACGGTCCCGAAGCCGGGCCC < 41bp 0.540786652393894 0.861529739689687 0.30852687 0.8170999 prediction 0.641486174591586 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155292685 chr1:155292686 synonymous SNV . 0 22 hPsi_associated_SNPs_29874 0 0 0 0 0 Cytosol 0.438717771317052 0.438706639454062 0.6341998 0 hPsi_site_23598 iPseU_CNN:0.6341998;iRNA_PseU:0 23599 chr8 106815297 106815297 1 + C A UCEC 106815296 + 106815276 106815316 41 CAAGTGATTATATTTCTGGTTCTCTTGTCATCCATAACACT CAAGTGATTATATTTCTGGTTATCTTGTCATCCATAACACT < 41bp 0.490617468903035 0.82074249712315 0.28817332 0.32185185 prediction 0.641484994246299 Functional Gain - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106815296 chr8:106815297 nonsynonymous SNV 0.980 3 22 hPsi_associated_SNPs_29875 0 0 0 0 0 chromatin 0.438717402811628 0.438685474685489 0 0 hPsi_site_23599 iPseU_CNN:0;iRNA_PseU:0 23600 chr1 55457675 55457675 1 + G A SKCM 55457674 + 55457654 55457694 41 GCCTGGCCTCCACCCAGCTATGAGAGCATCAGCCTTGCTCT GCCTGGCCTCCACCCAGCTATAAGAGCATCAGCCTTGCTCT < 41bp 0.572198057158197 0.892938933314242 0.30805326 0.37553614 prediction 0.64148175231209 Functional Gain - TMEM61 ENSG00000143001 CDS Human protein_coding chr1:55457674 chr1:55457675 nonsynonymous SNV 0.775 4 22 hPsi_associated_SNPs_29876 0 0 0 0 0 Cytosol 0.438718602486308 0.438718553663302 0 0 hPsi_site_23600 iPseU_CNN:0;iRNA_PseU:0 23601 chr4 88534101 88534101 1 + G A SKCM 88534100 + 88534080 88534120 41 GGGAATGGAGCAGATGAGGATGAAGACGAGGGTTCTGGTGA GGGAATGGAGCAGATGAGGATAAAGACGAGGGTTCTGGTGA < 41bp 0.402124911709939 0.820731101830699 0.27831566 0.5179809 prediction 0.641462203661399 Functional Gain - DSPP ENSG00000152591 CDS Human protein_coding chr4:88534100 chr4:88534101 nonsynonymous SNV 0.996 2 22 hPsi_associated_SNPs_29877 0 0 0 0 0 exosome 0.438870906012106 0.438576560056516 0.0359617999999999 0 hPsi_site_23601 iPseU_CNN:0.0359617999999999;iRNA_PseU:0 23602 chr3 43345219 43345219 1 + G A STAD 43345218 + 43345198 43345238 41 GGAAGAAGCTCACTACAAGCTGTGGATCTCTTGCATATTCC GGAAGAAGCTCACTACAAGCTATGGATCTCTTGCATATTCC < 41bp 0.417624100401314 0.820729337438403 0.33365625 0.5700649 prediction 0.641458674876807 Functional Gain - SNRK ENSG00000163788 CDS Human protein_coding chr3:43345218 chr3:43345219 nonsynonymous SNV 0.998 4 22 hPsi_associated_SNPs_29878 0 0 1 0 1 Cytosol 0.438718765381717 0.438718611432273 0.1401298 0 hPsi_site_23602 iPseU_CNN:0.1401298;iRNA_PseU:0 23603 chr9 130207151 130207151 1 + G A UCEC 130207150 + 130207130 130207170 41 CTGGGGAGAAACCCTACAAGTGCAGCGAGTGTGGGAAGGCC CTGGGGAGAAACCCTACAAGTACAGCGAGTGTGGGAAGGCC < 41bp 0.403405398834963 0.820728501914694 0.22899231 0.5613468 prediction 0.641457003829388 Functional Gain - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130207150 chr9:130207151 nonsynonymous SNV 0.957 4 22 hPsi_associated_SNPs_29879 0 0 0 0 0 cytosol 0.438718593555034 0.438718535361823 0.1226936 0 hPsi_site_23603 iPseU_CNN:0.1226936;iRNA_PseU:0 23604 chr5 7873611 7873611 1 + C A UCS 7873610 + 7873590 7873630 41 CCAAACACTGCCGGTTGATTTCTTTGCTCACCTGCGGTATG CCAAACACTGCCGGTTGATTTATTTGCTCACCTGCGGTATG < 41bp 0.547090782865808 0.86781889948946 0.37681484 0.6094848 prediction 0.641456233247303 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7873610 chr5:7873611 nonsynonymous SNV 0.551 0 22 hPsi_associated_SNPs_29880 0 0 1 0 2 Nucleus 0.438699121732407 0.438717427060715 0.2189696 0 hPsi_site_23604 iPseU_CNN:0.2189696;iRNA_PseU:0 23605 chr9 35679959 35679959 1 + G A COAD 35679958 + 35679938 35679978 41 GTGATTGAGGCCTCCTTCCCTGCTGGAGTGGACAGCAGTCC GTGATTGAGGCCTCCTTCCCTACTGGAGTGGACAGCAGTCC < 41bp 0.39831110142301 0.820726008157958 0.31609905 0.577352 prediction 0.641452016315915 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35679958 chr9:35679959 nonsynonymous SNV 0.466 0 22 hPsi_associated_SNPs_29881 0 0 1 0 1 Endoplasmic reticulum 0.438716738582906 0.438638799909699 0.154704 0 hPsi_site_23605 iPseU_CNN:0.154704;iRNA_PseU:0 23606 chr16 89597162 89597162 1 + G A LUSC 89597161 + 89597141 89597181 41 AGGAGTCAGCTTCAAAGACGTGGCAGGAATGCACGAAGCCA AGGAGTCAGCTTCAAAGACGTAGCAGGAATGCACGAAGCCA < 41bp 0.402972335881298 0.820723684990723 0.20764777 0.28476733 prediction 0.641447369981446 Functional Gain - SPG7 ENSG00000197912 CDS Human protein_coding chr16:89597161 chr16:89597162 synonymous SNV . 0 22 hPsi_associated_SNPs_29882 0 0 1 0 2 Nucleus 0.43871859537637 0.438631113899168 0 0 hPsi_site_23606 iPseU_CNN:0;iRNA_PseU:0 23607 chr14 100360989 100360989 1 + C A UCEC 100360988 + 100360968 100361008 41 GAAGGCTATGTAAAAATGTTTCTTCGTGGACGCCCTGTTAC GAAGGCTATGTAAAAATGTTTATTCGTGGACGCCCTGTTAC < 41bp 0.453429065979683 0.820722884607801 0.37161586 0.6606978 prediction 0.641445769215602 Functional Gain - EML1 ENSG00000066629 CDS Human protein_coding chr14:100360988 chr14:100360989 nonsynonymous SNV 0.998 2 22 hPsi_associated_SNPs_29883 0 0 1 0 1 Nucleus 0.438718429377878 0.438718519548688 0.3213956 0 hPsi_site_23607 iPseU_CNN:0.3213956;iRNA_PseU:0 23608 chr10 101464282 101464282 1 + C A COAD 101464281 + 101464261 101464301 41 TCCTTTGTATACAACCACTATCTCTTCTTTGCCTGTATCCT TCCTTTGTATACAACCACTATATCTTCTTTGCCTGTATCCT < 41bp 0.477982411043378 0.820719709668995 0.49173304 0.3443632 prediction 0.641439419337991 Functional Gain - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101464281 chr10:101464282 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29884 0 0 1 0 1 Endoplasmic reticulum 0.438718593028704 0.43871859296876 0 0 hPsi_site_23608 iPseU_CNN:0;iRNA_PseU:0 23609 chr7 73535737 73535737 1 + C A rs181643585 73535736 + 73535716 73535756 41 GGACAGTGGGGACCCAGGCTTCTCCTCAGAGCCAGGCCCTG GGACAGTGGGGACCCAGGCTTATCCTCAGAGCCAGGCCCTG < 41bp 0.528329056095972 0.849048673240833 0.25795713 0.35685045 prediction 0.641439234289724 Functional Gain - LIMK1 ENSG00000106683 UTR3 Human protein_coding chr7:73535736 chr7:73535737 . . 0 22 hPsi_associated_SNPs_29885 0 0 1 0 0 Ribosome 0.43871858873495 0.438718593338857 0 0 hPsi_site_23609 iPseU_CNN:0;iRNA_PseU:0 23610 chr12 20874885 20874885 1 + C A UCEC 20874884 + 20874864 20874904 41 GATCCCAAAGTAGAGAGGATTCTAATTCTTCCTCTGAGAAA GATCCCAAAGTAGAGAGGATTATAATTCTTCCTCTGAGAAA < 41bp 0.534589602189962 0.855308241251797 0.28329659 0.42561692 prediction 0.641437278123671 Functional Gain - SLCO1C1 ENSG00000139155 CDS Human protein_coding chr12:20874884 chr12:20874885 nonsynonymous SNV 0.229 1 22 hPsi_associated_SNPs_29886 0 0 0 0 1 nucleus 0.438718593276858 0.438718592993576 0 0 hPsi_site_23610 iPseU_CNN:0;iRNA_PseU:0 23611 chr14 75747636 75747636 1 + G A UCEC 75747635 + 75747615 75747655 41 GGCTTCCCAGAAGAGATGTCTGTGGCTTCCCTTGATCTGAC GGCTTCCCAGAAGAGATGTCTATGGCTTCCCTTGATCTGAC < 41bp 0.58429886313214 0.905013857411099 0.58409834 0.53170913 prediction 0.641429988557918 Functional Gain - FOS ENSG00000170345 CDS Human protein_coding chr14:75747635 chr14:75747636 nonsynonymous SNV 0.972 0 22 hPsi_associated_SNPs_29887 0 0 0 0 0 Endoplasmic reticulum 0.438718551649064 0.438718592952079 0 0 hPsi_site_23611 iPseU_CNN:0;iRNA_PseU:0 23612 chr14 20528375 20528375 1 + C A LUAD 20528374 + 20528354 20528394 41 TGTAGGTCAACCCTTCATTCTCCCTTGTACTTTCTCCTTGG TGTAGGTCAACCCTTCATTCTACCTTGTACTTTCTCCTTGG < 41bp 0.528486128315259 0.849200017751917 0.21433645 0.26225233 prediction 0.641427778873316 Functional Gain - OR4L1 ENSG00000176246 CDS Human protein_coding chr14:20528374 chr14:20528375 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_29888 0 0 0 0 0 unknown 0.438718592957753 0.438718571997992 0 0 hPsi_site_23612 iPseU_CNN:0;iRNA_PseU:0 23613 chr19 19431806 19431806 1 + G A LUSC 19431805 + 19431785 19431825 41 CAGCCCGCCCAAAATCCGCCTGTGCGTGCACTGCCTGCAGG CAGCCCGCCCAAAATCCGCCTATGCGTGCACTGCCTGCAGG < 41bp 0.413269848354533 0.820710947060276 0.3539456 0.8424477 prediction 0.641421894120552 Functional Gain - MAU2 ENSG00000129933 CDS Human protein_coding chr19:19431805 chr19:19431806 synonymous SNV . 0 22 hPsi_associated_SNPs_29889 0 0 1 0 0 Nucleus 0.438718956209645 0.438721058984442 0.6848954 0 hPsi_site_23613 iPseU_CNN:0.6848954;iRNA_PseU:0 23614 chr2 242690737 242690737 1 + G A LUAD 242690736 + 242690716 242690756 41 TGAGAAGCTGGGCCACTTCCTGGAGCACGCGCTGGGCTCCG TGAGAAGCTGGGCCACTTCCTAGAGCACGCGCTGGGCTCCG < 41bp 0.39973333949624 0.820705518778264 0.23767868 0.62130845 prediction 0.641411037556527 Functional Gain - D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242690736 chr2:242690737 synonymous SNV . 0 22 hPsi_associated_SNPs_29890 0 0 1 0 2 Ribosome 0.438718506020018 0.43872595043785 0.2426169 0 hPsi_site_23614 iPseU_CNN:0.2426169;iRNA_PseU:0 23615 chr18 7231316 7231316 1 + G A COAD 7231315 + 7231295 7231335 41 CAGCCTGGTCACGAGAGGAATGACAGACATCCCCGACTTTC CAGCCTGGTCACGAGAGGAATAACAGACATCCCCGACTTTC < 41bp 0.418078462713069 0.820703781209918 0.33410764 0.640908 prediction 0.641407562419837 Functional Gain - LRRC30 ENSG00000206422 CDS Human protein_coding chr18:7231315 chr18:7231316 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29891 0 0 0 0 0 unknown 0.438720234765993 0.43871836974574 0.281816 0 hPsi_site_23615 iPseU_CNN:0.281816;iRNA_PseU:0 23616 chr16 22587953 22587953 1 + C A UCEC 22587952 + 22587932 22587972 41 GGAGCTCTCCAGTCGTGGGGTCTTTGGCTTGGTTGTCCCCT GGAGCTCTCCAGTCGTGGGGTATTTGGCTTGGTTGTCCCCT < 41bp 0.490165494876652 0.820702617849178 0.32305887 0.32844883 prediction 0.641405235698357 Functional Gain - LOC653786 ENSG00000257838 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:22587952 chr16:22587953 . . 0 22 hPsi_associated_SNPs_29892 0 0 0 0 1 unknown 0.438718592995103 0.438718592995102 0 0 hPsi_site_23616 iPseU_CNN:0;iRNA_PseU:0 23617 chr22 35730359 35730359 1 + C A UCEC 35730358 + 35730338 35730378 41 GTGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACT GTGAGAGCTGGCCTGCAGTCTATGGAGGCCTCTGGTCGACT < 41bp 0.557193224256059 0.87789380736004 0.24733779 0.29415518 prediction 0.641401166207962 Functional Gain - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35730358 chr22:35730359 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29893 0 0 1 0 1 Cytosol 0.438718632020629 0.438718622477758 0 0 hPsi_site_23617 iPseU_CNN:0;iRNA_PseU:0 23618 chr17 60526044 60526044 1 + G A GBM 60526043 + 60526023 60526063 41 AACTGACAATGTACCGGGTTTGGATTCAGTGCAAATACTGC AACTGACAATGTACCGGGTTTAGATTCAGTGCAAATACTGC < 41bp 0.576929360934926 0.897624786863603 0.7471896 0.9084728 prediction 0.641390851857354 Functional Gain - METTL2A ENSG00000087995 CDS Human protein_coding chr17:60526043 chr17:60526044 stopgain 0.997 1 22 hPsi_associated_SNPs_29894 0 0 1 0 0 Ribosome 0.439821586749904 0.440361860847024 0.3225664 0 hPsi_site_23618 iPseU_CNN:0.3225664;iRNA_PseU:0 23619 chr14 21511475 21511475 1 + G A UCEC 21511474 + 21511454 21511494 41 CGGGGCCGTGTCCCTGACCATGTGTAAGCTCACCTCAGGGA CGGGGCCGTGTCCCTGACCATATGTAAGCTCACCTCAGGGA < 41bp 0.579917399728598 0.900608946171025 0.30688465 0.45971912 prediction 0.641383092884854 Functional Gain - RNASE7 ENSG00000165799 CDS Human protein_coding chr14:21511474 chr14:21511475 nonsynonymous SNV 0.033 0 22 hPsi_associated_SNPs_29895 0 0 0 2 0 exosome 0.703339240910493 0.536079963471741 0 0 hPsi_site_23619 iPseU_CNN:0;iRNA_PseU:0 23620 chr16 90001825 90001825 1 + C T SKCM 90001826 - 90001806 90001846 41 CTGCTCGTCCACCTCCTTCATGGACATGCGGCCCCGGAACA CTGCTCGTCCACCTCCTTCATAGACATGCGGCCCCGGAACA < 41bp 0.567518430539833 0.888209139548852 0.3250775 0.6576065 prediction 0.641381418018038 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001826 chr16:90001825 synonymous SNV . 0 22 hPsi_associated_SNPs_29896 0 0 0 0 0 chromatin 0.438718554795674 0.438718592995081 0.315213 0 hPsi_site_23620 iPseU_CNN:0.315213;iRNA_PseU:0 23621 chr16 56704816 56704816 1 + G A LUSC 56704815 + 56704795 56704835 41 TCCCTTTTTCCCCAGGCTGCTGCTCCTGTTGCCCCCTGGGC TCCCTTTTTCCCCAGGCTGCTACTCCTGTTGCCCCCTGGGC < 41bp 0.408760111078341 0.820689516134521 0.2558971 0.50895315 prediction 0.641379032269042 Functional Gain - MT1H ENSG00000205358 CDS Human protein_coding chr16:56704815 chr16:56704816 nonsynonymous SNV 0.034 3 22 hPsi_associated_SNPs_29897 0 0 0 0 1 Cytosol 0.435533251250788 0.436850731297968 0.0179062999999999 0 hPsi_site_23621 iPseU_CNN:0.0179062999999999;iRNA_PseU:0 23622 chr15 43817394 43817394 1 + G A UCEC 43817393 + 43817373 43817413 41 GGAAGAAATGGGGCATCTGATGCAGGCCGAGGATACCTCTC GGAAGAAATGGGGCATCTGATACAGGCCGAGGATACCTCTC < 41bp 0.446452357328461 0.820688473566828 0.3487434 0.56358063 prediction 0.641376947133657 Functional Gain - MAP1A ENSG00000166963 CDS Human protein_coding chr15:43817393 chr15:43817394 nonsynonymous SNV 0.967 0 22 hPsi_associated_SNPs_29898 0 0 1 0 0 nucleolus 0.438718613778545 0.438718654966762 0.12716126 0 hPsi_site_23622 iPseU_CNN:0.12716126;iRNA_PseU:0 23623 chr11 6891288 6891288 1 + C A UCEC 6891287 + 6891267 6891307 41 TGGAGTGGCTGAATGCTTCCTCCTGGCTACCATGGCATATG TGGAGTGGCTGAATGCTTCCTACTGGCTACCATGGCATATG < 41bp 0.541458988550697 0.862145947873163 0.19730654 0.3350355 prediction 0.641373918644933 Functional Gain - OR10A2 ENSG00000170790 CDS Human protein_coding chr11:6891287 chr11:6891288 synonymous SNV . 0 22 hPsi_associated_SNPs_29899 0 0 0 0 0 unknown 0.438718592880243 0.438703063231277 0 0 hPsi_site_23623 iPseU_CNN:0;iRNA_PseU:0 23624 chr11 66612374 66612374 1 + G T UCEC 66612373 + 66612353 66612393 41 GGCCCGCTGCCTCACAGACATGCGTTGGCTGCGGAACCAAG GGCCCGCTGCCTCACAGACATTCGTTGGCTGCGGAACCAAG < 41bp 0.526990012357498 0.847675760510643 0.45641604 0.603386 prediction 0.64137149630629 Functional Gain - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66612373 chr11:66612374 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29900 0 0 1 0 1 Ribosome 0.437764546404811 0.439091691884488 0.206772 0 hPsi_site_23624 iPseU_CNN:0.206772;iRNA_PseU:0 23625 chr20 43247329 43247329 1 + C A rs551104735 43247328 + 43247308 43247348 41 AGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGG AGCAGCCCACACAGGAACGCTACTCTCGCGAGCGGCCCGGG < 41bp 0.479375618635043 0.820684185335187 0.5358462 0.945054 prediction 0.641368370670375 Functional Gain - PKIG ENSG00000168734 UTR3 Human protein_coding chr20:43247328 chr20:43247329 . . 0 22 hPsi_associated_SNPs_29901 0 0 1 0 0 Ribosome 0.438719103517428 0.43870563211107 0.8184156 0 hPsi_site_23625 iPseU_CNN:0.8184156;iRNA_PseU:0 23626 chr1 110128893 110128893 1 + G A CESC 110128892 + 110128872 110128912 41 AAAAAGTGGATTCACTGTTTTGAGGGAGTGACAGCAATTAT AAAAAGTGGATTCACTGTTTTAAGGGAGTGACAGCAATTAT < 41bp 0.411563515166171 0.82068397397536 0.25817406 0.32355392 prediction 0.64136794795072 Functional Gain - GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110128892 chr1:110128893 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29902 0 0 1 0 2 Cytosol 0.438719171178704 0.439282660014142 0 0 hPsi_site_23626 iPseU_CNN:0;iRNA_PseU:0 23627 chr14 69798235 69798235 1 + G A LAML 69798234 + 69798214 69798254 41 GTCATCAGTCTGGATAATTTTGCCTACCTTGCAGCATCTGC GTCATCAGTCTGGATAATTTTACCTACCTTGCAGCATCTGC < 41bp 0.389564761350773 0.820681892196906 0.3412242 0.4423561 prediction 0.641363784393812 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69798234 chr14:69798235 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_29903 0 0 0 0 2 chromatin 0.43872415016821 0.438722253286626 0 0 hPsi_site_23627 iPseU_CNN:0;iRNA_PseU:0 23628 chr11 63174041 63174041 1 + G A UCEC 63174040 + 63174020 63174060 41 GGGGAACAATGTTTTCCTGTTGCAGACTCTCTTTGGTGCAG GGGGAACAATGTTTTCCTGTTACAGACTCTCTTTGGTGCAG < 41bp 0.58070007090736 0.901379406333384 0.43749174 0.6972646 prediction 0.641358670852048 Functional Gain - SLC22A9 ENSG00000149742 CDS Human protein_coding chr11:63174040 chr11:63174041 synonymous SNV . 0 22 hPsi_associated_SNPs_29904 0 0 0 0 1 nucleus 0.438970298629481 0.438021449405798 0.3945292 0 hPsi_site_23628 iPseU_CNN:0.3945292;iRNA_PseU:0 23629 chr1 173726252 173726252 1 + G A GBM 173726251 + 173726231 173726271 41 GTTCTTGATGATCTGTTATATGCAGTAGGAGGCCATGATGG GTTCTTGATGATCTGTTATATACAGTAGGAGGCCATGATGG < 41bp 0.407821515085733 0.820675191536921 0.32346597 0.49870667 prediction 0.641350383073842 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173726251 chr1:173726252 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29905 0 0 1 0 1 Cytosol 0.438719488034111 0.438737301854068 0 0 hPsi_site_23629 iPseU_CNN:0;iRNA_PseU:0 23630 chr20 3846418 3846418 1 + C A SKCM 3846417 + 3846397 3846437 41 CTGAGAATAGGGGCCTTGGGTCGGAGCTGAGTAAGCCTGGC CTGAGAATAGGGGCCTTGGGTAGGAGCTGAGTAAGCCTGGC < 41bp 0.474282468714973 0.820673653395652 0.3982132 0.6169232 prediction 0.641347306791304 Functional Gain - MAVS ENSG00000088888 CDS Human protein_coding chr20:3846417 chr20:3846418 stopgain 0.000 0 22 hPsi_associated_SNPs_29906 0 0 1 0 1 Nucleus 0.438718593086631 0.438718597535308 0.2338464 0 hPsi_site_23630 iPseU_CNN:0.2338464;iRNA_PseU:0 23631 chr17 38487443 38487443 1 + G A rs144842676 38487442 + 38487422 38487462 41 GAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGC GAGCCCCCTGCCAGACTGTCTACCTCCCTTCTGACTGTGGC < 41bp 0.432546654142348 0.820672971143365 0.32411832 0.46126714 prediction 0.64134594228673 Functional Gain - RARA ENSG00000131759 UTR5 Human protein_coding chr17:38487442 chr17:38487443 . . 0 22 hPsi_associated_SNPs_29907 0 0 1 0 0 chromatin 0.438807764492782 0.438960039646989 0 0 hPsi_site_23631 iPseU_CNN:0;iRNA_PseU:0 23632 chr11 120989100 120989100 1 + C A UCEC 120989099 + 120989079 120989119 41 TCTGGATTTCAACAATGAGATCTACTGCCAGGAGGCTTCCT TCTGGATTTCAACAATGAGATATACTGCCAGGAGGCTTCCT < 41bp 0.55016958955696 0.870841017410299 0.26054633 0.29227585 prediction 0.641342855706677 Functional Gain - TECTA ENSG00000109927 CDS Human protein_coding chr11:120989099 chr11:120989100 synonymous SNV . 0 22 hPsi_associated_SNPs_29908 0 0 0 0 1 exosome 0.438718531070948 0.438723076823599 0 0 hPsi_site_23632 iPseU_CNN:0;iRNA_PseU:0 23633 chr11 67220114 67220114 1 + G A COAD 67220113 + 67220093 67220133 41 AGACCGTGTCCCAGCCACCTTGGGGGTAGGAGTCCTCATCA AGACCGTGTCCCAGCCACCTTAGGGGTAGGAGTCCTCATCA < 41bp 0.421074844180539 0.820671045160513 0.26073056 0.6187389 prediction 0.641342090321025 Functional Gain - GPR152 ENSG00000175514 CDS Human protein_coding chr11:67220113 chr11:67220114 stopgain 0.998 0 22 hPsi_associated_SNPs_29909 0 0 0 0 2 exosome 0.438717609623444 0.438709075003965 0.2374778 0 hPsi_site_23633 iPseU_CNN:0.2374778;iRNA_PseU:0 23634 chr5 140482414 140482414 1 + G A UCEC 140482413 + 140482393 140482433 41 CTCGGTGGGTCGCTGCTCGGTGCCCGAGGGCCCCTTTCCAG CTCGGTGGGTCGCTGCTCGGTACCCGAGGGCCCCTTTCCAG < 41bp 0.420869898374364 0.820665307485561 0.34270898 0.9570899 prediction 0.641330614971123 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140482413 chr5:140482414 synonymous SNV . 0 22 hPsi_associated_SNPs_29910 0 0 0 0 0 exosome 0.438719328941964 0.438721551648923 0.9141798 0 hPsi_site_23634 iPseU_CNN:0.9141798;iRNA_PseU:0 23635 chr19 19168436 19168436 1 + G A STAD 19168435 + 19168415 19168455 41 AGAGGGGCAACCTGGCGCCATGACCCCAGGCCCAGTCTGGG AGAGGGGCAACCTGGCGCCATAACCCCAGGCCCAGTCTGGG < 41bp 0.415360268055677 0.820664355539018 0.14890403 0.30245078 prediction 0.641328711078036 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19168435 chr19:19168436 synonymous SNV . 0 22 hPsi_associated_SNPs_29911 0 0 0 0 1 Ribosome 0.43874455889565 0.438718590520263 0 0 hPsi_site_23635 iPseU_CNN:0;iRNA_PseU:0 23636 chr17 33321427 33321427 1 + C A UCEC 33321426 + 33321406 33321446 41 TTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTTCCTCA TTCAGCTACTTCAGCCGCAGTATCAAGCCCGTCCTTCCTCA < 41bp 0.440825499951534 0.820661608036763 0.29600224 0.3792175 prediction 0.641323216073526 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33321426 chr17:33321427 nonsynonymous SNV 0.997 5 22 hPsi_associated_SNPs_29912 0 0 0 0 0 Cytosol 0.438718592237962 0.438719136704888 0 0 hPsi_site_23636 iPseU_CNN:0;iRNA_PseU:0 23637 chr22 29837904 29837904 1 + G A SKCM 29837903 + 29837883 29837923 41 ACAGCGAGTGGGGATTTTTCTGGATATGGGCATGCAGAACG ACAGCGAGTGGGGATTTTTCTAGATATGGGCATGCAGAACG < 41bp 0.411402500461124 0.820660467648077 0.14971623 0.20078579 prediction 0.641320935296154 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837903 chr22:29837904 synonymous SNV . 0 22 hPsi_associated_SNPs_29913 0 0 0 0 0 exosome 0.438660904975645 0.438717807192656 0 0 hPsi_site_23637 iPseU_CNN:0;iRNA_PseU:0 23638 chr18 51884294 51884294 1 + G A rs150193507 51884293 + 51884273 51884313 41 GGCGCCATGTTGGGGCGGTTTGAAAGCGAGCGCGGGTGTCG GGCGCCATGTTGGGGCGGTTTAAAAGCGAGCGCGGGTGTCG < 41bp 0.448547259008691 0.820658917423787 0.46251425 0.78245795 prediction 0.641317834847574 Functional Gain - C18orf54 ENSG00000166845;ENSG00000174448 UTR5 Human other chr18:51884293 chr18:51884294 . . 0 22 hPsi_associated_SNPs_29914 0 0 1 0 0 chromatin 0.43872111257522 0.438717402005094 0.5649159 0 hPsi_site_23638 iPseU_CNN:0.5649159;iRNA_PseU:0 23639 chr9 108424981 108424981 1 + G A UCEC 108424980 + 108424960 108425000 41 AAGCCTGCAACAAACGGGAGTGGCTGCTCAGGGGAACATTC AAGCCTGCAACAAACGGGAGTAGCTGCTCAGGGGAACATTC < 41bp 0.416564814980336 0.820655227984816 0.2513776 0.3486399 prediction 0.641310455969631 Functional Gain - TAL2 ENSG00000186051 CDS Human protein_coding chr9:108424980 chr9:108424981 synonymous SNV . 0 22 hPsi_associated_SNPs_29915 0 0 0 0 0 exosome 0.43871869214864 0.438759788479923 0 0 hPsi_site_23639 iPseU_CNN:0;iRNA_PseU:0 23640 chr14 70171360 70171360 1 + C A OV 70171359 + 70171339 70171379 41 CACTTGGGGTCCCCACGCTGTCTATAGTGGCTTCTACTGCC CACTTGGGGTCCCCACGCTGTATATAGTGGCTTCTACTGCC < 41bp 0.560955119991694 0.881607401237611 0.20927754 0.21573964 prediction 0.641304562491834 Functional Gain - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70171359 chr14:70171360 nonsynonymous SNV 0.950 4 22 hPsi_associated_SNPs_29916 0 0 1 0 2 Endoplasmic reticulum 0.438718142749526 0.438692594660875 0 0 hPsi_site_23640 iPseU_CNN:0;iRNA_PseU:0 23641 chr22 46508147 46508147 1 + C A rs142741633 46508146 + 46508126 46508166 41 TGGGGGCCACGAGTGCTGCTTCTGGTGGCGCTGTGCGGGGA TGGGGGCCACGAGTGCTGCTTATGGTGGCGCTGTGCGGGGA < 41bp 0.503998754423934 0.82464417004823 0.54005116 0.6785394 prediction 0.641290831248592 Functional Gain - MIRLET7BHG ENSG00000197182 UTR3 Human lincRNA chr22:46508146 chr22:46508147 . . 0 22 hPsi_associated_SNPs_29917 0 0 0 0 0 Nucleus 0.438785840564597 0.438739063507893 0.27697648 0 hPsi_site_23641 iPseU_CNN:0.27697648;iRNA_PseU:0 23642 chr7 128355709 128355709 1 + C A GBM 128355708 + 128355688 128355728 41 TCTCCAGAATTCAACCTGTTTCTTGACTCCGTGGTGTTTGA TCTCCAGAATTCAACCTGTTTATTGACTCCGTGGTGTTTGA < 41bp 0.473673309180108 0.820643138994931 0.71586406 0.73143107 prediction 0.641286277989862 Functional Gain - FAM71F1 ENSG00000135248 CDS Human protein_coding chr7:128355708 chr7:128355709 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_29918 0 0 0 0 1 exosome 0.430465958604345 0.438815095289988 0.0311340199999999 0 hPsi_site_23642 iPseU_CNN:0.0311340199999999;iRNA_PseU:0 23643 chr14 88477439 88477439 1 + C A LUAD 88477438 + 88477418 88477458 41 ATAAAGACAACTGGACTTTCTCTCCTGCCTTGTGCAAAGGG ATAAAGACAACTGGACTTTCTATCCTGCCTTGTGCAAAGGG < 41bp 0.470141015798204 0.820642032317708 0.40064293 0.77835786 prediction 0.641284064635416 Functional Gain - GPR65 ENSG00000140030 CDS Human protein_coding chr14:88477438 chr14:88477439 nonsynonymous SNV 0.998 3 22 hPsi_associated_SNPs_29919 0 0 0 0 0 exosome 0.438718599606898 0.438718745465647 0.55671572 0 hPsi_site_23643 iPseU_CNN:0.55671572;iRNA_PseU:0 23644 chr14 20216038 20216038 1 + G A LUAD 20216037 + 20216017 20216057 41 GGTTGGTTCTTGCCTGCTGGTGTGGGGGTTTTATCCACTCT GGTTGGTTCTTGCCTGCTGGTATGGGGGTTTTATCCACTCT < 41bp 0.568974460646479 0.889613135544476 0.25129867 0.63056314 prediction 0.641277349795993 Functional Gain - OR4Q3 ENSG00000182652 CDS Human protein_coding chr14:20216037 chr14:20216038 nonsynonymous SNV 0.998 1 22 hPsi_associated_SNPs_29920 0 0 0 0 0 unknown 0.438718592995102 0.438718592995102 0.26112628 0 hPsi_site_23644 iPseU_CNN:0.26112628;iRNA_PseU:0 23645 chr19 41594496 41594496 1 + G A GBM 41594495 + 41594475 41594515 41 GCCTCCGGGACCCACCCCATTGCCCTTCATTGGAAACTACC GCCTCCGGGACCCACCCCATTACCCTTCATTGGAAACTACC < 41bp 0.581148342645296 0.901782631136259 0.2765605 0.4196241 prediction 0.641268576981925 Functional Gain - CYP2A13 ENSG00000197838 CDS Human protein_coding chr19:41594495 chr19:41594496 synonymous SNV . 0 22 hPsi_associated_SNPs_29921 0 0 0 0 1 unknown 0.438718592995102 0.438718592995098 0 0 hPsi_site_23645 iPseU_CNN:0;iRNA_PseU:0 23646 chr16 2577778 2577778 1 + G T LUSC 2577777 + 2577757 2577797 41 TTGCTCCCTCCTCCCAGGGCTGCACCTGGAGGGCCCCTTCA TTGCTCCCTCCTCCCAGGGCTTCACCTGGAGGGCCCCTTCA < 41bp 0.499098097838793 0.820632674776842 0.23051587 0.34184903 prediction 0.641265349553684 Functional Gain - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577777 chr16:2577778 nonsynonymous SNV . 0 22 hPsi_associated_SNPs_29922 0 0 1 0 1 Ribosome 0.438718583323467 0.438712382530473 0 0 hPsi_site_23646 iPseU_CNN:0;iRNA_PseU:0 23647 chr16 81388275 81388275 1 + C A COAD 81388274 + 81388254 81388294 41 AAAAGCTTAAAGAAGTGATTTCTCTTGAGAAGTTAAACGTT AAAAGCTTAAAGAAGTGATTTATCTTGAGAAGTTAAACGTT < 41bp 0.467078410186706 0.820627161916973 0.31662202 0.34950447 prediction 0.641254323833947 Functional Gain - GAN ENSG00000261609 CDS Human protein_coding chr16:81388274 chr16:81388275 nonsynonymous SNV 0.993 2 22 hPsi_associated_SNPs_29923 0 0 0 0 1 Ribosome 0.438765022910445 0.438733741843896 0 0 hPsi_site_23647 iPseU_CNN:0;iRNA_PseU:0 23648 chr1 182798000 182798000 1 + C A READ 182797999 + 182797979 182798019 41 TGAAGAGCCTGGATTTCCTTTCTTTCACTGATTTAAAGGAT TGAAGAGCCTGGATTTCCTTTATTTCACTGATTTAAAGGAT < 41bp 0.541562389631666 0.862189422148755 0.27601057 0.2569843 prediction 0.641254065034179 Functional Gain - NPL ENSG00000135838 CDS Human protein_coding chr1:182797999 chr1:182798000 nonsynonymous SNV 0.412 2 22 hPsi_associated_SNPs_29924 0 0 0 0 0 Cytosol 0.438718593450335 0.438718427669551 0 0 hPsi_site_23648 iPseU_CNN:0;iRNA_PseU:0 23649 chr17 35310257 35310257 1 + G A BLCA 35310256 + 35310236 35310276 41 CTGGGTCTGGAGGAATATGATGAGGACGACCTGGGTGCTGC CTGGGTCTGGAGGAATATGATAAGGACGACCTGGGTGCTGC < 41bp 0.395260178000031 0.820626050143189 0.2291539 0.33336854 prediction 0.641252100286377 Functional Gain - AATF ENSG00000108270 CDS Human other chr17:35310256 chr17:35310257 nonsynonymous SNV 0.037 0 22 hPsi_associated_SNPs_29925 0 0 1 0 1 chromatin 0.438718514196695 0.438718941106418 0 0 hPsi_site_23649 iPseU_CNN:0;iRNA_PseU:0 23650 chrX 140994519 140994519 1 + C A LUSC 140994518 + 140994498 140994538 41 GGGTTTTCCCCAGTCTCCTCTCCAGATTCCTGTGAGCTCCT GGGTTTTCCCCAGTCTCCTCTACAGATTCCTGTGAGCTCCT < 41bp 0.464387523726204 0.820623113816853 0.462941 0.7043243 prediction 0.641246227633706 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140994518 chrX:140994519 synonymous SNV . 0 22 hPsi_associated_SNPs_29926 0 0 0 0 0 exosome 0.438717673320643 0.438719760065072 0.4086486 0 hPsi_site_23650 iPseU_CNN:0.4086486;iRNA_PseU:0 23651 chr3 184100851 184100851 1 + G A UCEC 184100850 + 184100830 184100870 41 CAACCTGACAGTCCAGGAGATGGACTGGCTGGTGCTGGGGG CAACCTGACAGTCCAGGAGATAGACTGGCTGGTGCTGGGGG < 41bp 0.403200837335109 0.820622766453967 0.2783537 0.31589845 prediction 0.641245532907935 Functional Gain - CHRD ENSG00000090539 CDS Human protein_coding chr3:184100850 chr3:184100851 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29927 0 0 1 0 1 nucleus 0.439230530022017 0.438738493022312 0 0 hPsi_site_23651 iPseU_CNN:0;iRNA_PseU:0 23652 chr3 127318260 127318260 1 + G A BLCA 127318259 + 127318239 127318279 41 GGCCGAAGCTCCCGGCGTACTGATGCCCTCACCTCCAGCCC GGCCGAAGCTCCCGGCGTACTAATGCCCTCACCTCCAGCCC < 41bp 0.569180911313647 0.889779923403732 0.25986317 0.7300534 prediction 0.641198024180171 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127318259 chr3:127318260 nonsynonymous SNV 0.539 2 22 hPsi_associated_SNPs_29928 0 0 1 0 0 Cytosol 0.438718590483721 0.438718588386133 0.4601068 0 hPsi_site_23652 iPseU_CNN:0.4601068;iRNA_PseU:0 23653 chr12 57485287 57485287 1 + G A UCEC 57485286 + 57485266 57485306 41 CCAGGGGAAAAGGCAGGCAGTGCCCGCAGTTTTAGCCCCAA CCAGGGGAAAAGGCAGGCAGTACCCGCAGTTTTAGCCCCAA < 41bp 0.587256719260909 0.907855662956724 0.24554324 0.6996826 prediction 0.64119788739163 Functional Gain - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485286 chr12:57485287 nonsynonymous SNV 0.875 0 22 hPsi_associated_SNPs_29929 0 0 0 0 0 Cytosol 0.438720480063139 0.438733207681084 0.3993652 0 hPsi_site_23653 iPseU_CNN:0.3993652;iRNA_PseU:0 23654 chr11 123811173 123811173 1 + C A LUAD 123811172 + 123811152 123811192 41 ATTGTCACCCCCATGCTGAATCCTGCCATCTATACCCTGAG ATTGTCACCCCCATGCTGAATACTGCCATCTATACCCTGAG < 41bp 0.529365690222615 0.849958664791042 0.2792557 0.46254766 prediction 0.641185949136854 Functional Gain - OR4D5 ENSG00000171014 CDS Human protein_coding chr11:123811172 chr11:123811173 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29930 0 0 0 0 0 exosome 0.438717180728052 0.43872043863031 0 0 hPsi_site_23654 iPseU_CNN:0;iRNA_PseU:0 23655 chr11 48328602 48328602 1 + G A STAD 48328601 + 48328581 48328621 41 CATCCTCTTTAACATTGTGATGCCACCTTTGCTGAACCCTT CATCCTCTTTAACATTGTGATACCACCTTTGCTGAACCCTT < 41bp 0.432219052919248 0.820588525796302 0.29647592 0.32610387 prediction 0.641177051592604 Functional Gain - OR4S1 ENSG00000176555 CDS Human protein_coding chr11:48328601 chr11:48328602 nonsynonymous SNV 0.025 0 22 hPsi_associated_SNPs_29931 0 0 0 0 0 unknown 0.438753250792424 0.439363370611831 0 0 hPsi_site_23655 iPseU_CNN:0;iRNA_PseU:0 23656 chr3 97888359 97888359 1 + G A UCEC 97888358 + 97888338 97888378 41 GCAAGCAGATGGTCAAAATATGGTGGAGCCTCTATTCTACA GCAAGCAGATGGTCAAAATATAGTGGAGCCTCTATTCTACA < 41bp 0.54913915634615 0.869727362778115 0.3044116 0.6155607 prediction 0.64117641286393 Functional Gain - OR5H15 ENSG00000233412 CDS Human protein_coding chr3:97888358 chr3:97888359 nonsynonymous SNV 0.305 1 22 hPsi_associated_SNPs_29932 0 0 0 0 0 unknown 0.438742653035887 0.438718543699808 0.2311214 0 hPsi_site_23656 iPseU_CNN:0.2311214;iRNA_PseU:0 23657 chr3 167510504 167510504 1 + C A COAD 167510503 + 167510483 167510523 41 CTGAAAATACTAGAACCTTTTCTTTCACTAAAGATGATGAA CTGAAAATACTAGAACCTTTTATTTCACTAAAGATGATGAA < 41bp 0.543651601050955 0.864237236314955 0.24687076 0.23313907 prediction 0.641171270528 Functional Gain - SERPINI1 ENSG00000163536 CDS Human protein_coding chr3:167510503 chr3:167510504 nonsynonymous SNV 0.988 5 22 hPsi_associated_SNPs_29933 0 0 0 0 1 Endoplasmic reticulum 0.445776978527525 0.439050366060329 0 0 hPsi_site_23657 iPseU_CNN:0;iRNA_PseU:0 23658 chr3 186370288 186370288 1 + G T BLCA 186370287 + 186370267 186370307 41 GAATCCCCAGGGAGAAACCCTGGATATTTCCTTCCTCTTCC GAATCCCCAGGGAGAAACCCTTGATATTTCCTTCCTCTTCC < 41bp 0.504866137502908 0.825449478256238 0.30749902 0.329203 prediction 0.64116668150666 Functional Gain - FETUB ENSG00000090512 CDS Human protein_coding chr3:186370287 chr3:186370288 synonymous SNV . 0 22 hPsi_associated_SNPs_29934 0 0 0 0 0 exosome 0.438718592995096 0.43871859299509 0 0 hPsi_site_23658 iPseU_CNN:0;iRNA_PseU:0 23659 chr20 55206743 55206743 1 + G A COAD 55206742 + 55206722 55206762 41 GCCTCACCAGATGGACGAGGTGCAGGTGAGCGGCGCTGCGG GCCTCACCAGATGGACGAGGTACAGGTGAGCGGCGCTGCGG < 41bp 0.402735973608632 0.820575195389107 0.33868375 0.8419797 prediction 0.641150390778214 Functional Gain - TFAP2C ENSG00000087510 CDS Human protein_coding chr20:55206742 chr20:55206743 synonymous SNV . 0 22 hPsi_associated_SNPs_29935 0 0 0 0 1 Cytosol 0.438718622278798 0.438725953405009 0.6839594 0 hPsi_site_23659 iPseU_CNN:0.6839594;iRNA_PseU:0 23660 chr9 35674290 35674290 1 + G T BRCA 35674291 - 35674271 35674311 41 GAGCCTCAACAGTAGGTAGATCCTCTAACTTCAGGGAGCCC GAGCCTCAACAGTAGGTAGATACTCTAACTTCAGGGAGCCC < 41bp 0.542809082031239 0.863380762202974 0.18500552 0.6246313 prediction 0.64114336034347 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35674291 chr9:35674290 nonsynonymous SNV 0.990 3 22 hPsi_associated_SNPs_29936 0 0 0 0 0 Endoplasmic reticulum 0.438718592992907 0.438724432718048 0.2492626 0 hPsi_site_23660 iPseU_CNN:0.2492626;iRNA_PseU:0 23661 chr9 96080715 96080715 1 + C T STAD 96080716 - 96080696 96080736 41 GCAGCTCCGCCAGTGTGCCCTGCCCCAGCGTCCCGCCGTCT GCAGCTCCGCCAGTGTGCCCTACCCCAGCGTCCCGCCGTCT < 41bp 0.578141166005862 0.898712635482263 0.24609286 0.5849822 prediction 0.641142938952803 Functional Gain - C9orf129 ENSG00000204352 CDS Human protein_coding chr9:96080716 chr9:96080715 nonsynonymous SNV 0.007 1 22 hPsi_associated_SNPs_29937 0 0 0 0 0 exosome 0.438718442019635 0.438718184862465 0.1699644 0 hPsi_site_23661 iPseU_CNN:0.1699644;iRNA_PseU:0 23662 chr20 44108666 44108666 1 + G A KIRP 44108665 + 44108645 44108685 41 AGTGCCAGGTGGACAGCCAGTGTCCTGGCCAGATGAAATGC AGTGCCAGGTGGACAGCCAGTATCCTGGCCAGATGAAATGC < 41bp 0.585811765168539 0.906379238990298 0.28130475 0.4131285 prediction 0.641134947643518 Functional Gain - WFDC2 ENSG00000101443 CDS Human protein_coding chr20:44108665 chr20:44108666 nonsynonymous SNV 0.066 5 22 hPsi_associated_SNPs_29938 0 0 0 0 2 Endoplasmic reticulum 0.438718531373215 0.438718623148576 0 0 hPsi_site_23662 iPseU_CNN:0;iRNA_PseU:0 23663 chr16 48395905 48395905 1 + C T UCEC 48395906 - 48395886 48395926 41 AGGCTCTCTGGATGCTGTAATGCCCCATCTGATGCATCAGC AGGCTCTCTGGATGCTGTAATACCCCATCTGATGCATCAGC < 41bp 0.407177929802634 0.820563378110959 0.16077971 0.327789 prediction 0.641126756221918 Functional Gain - SIAH1 ENSG00000196470 CDS Human protein_coding chr16:48395906 chr16:48395905 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_29939 0 0 1 0 0 chromatin 0.43869514412128 0.438555505982066 0 0 hPsi_site_23663 iPseU_CNN:0;iRNA_PseU:0 23664 chr11 27016091 27016091 1 + C A COAD 27016090 + 27016070 27016110 41 CAGAATGGTGTTTCTGAAGTTCTTCTGCATGAGTTTCTTCT CAGAATGGTGTTTCTGAAGTTATTCTGCATGAGTTTCTTCT < 41bp 0.531277558027076 0.851839726516716 0.30265817 0.4128227 prediction 0.64112433697928 Functional Gain - FIBIN ENSG00000176971 CDS Human protein_coding chr11:27016090 chr11:27016091 nonsynonymous SNV 0.299 0 22 hPsi_associated_SNPs_29940 0 0 0 0 0 exosome 0.432921981611322 0.438863669084833 0 0 hPsi_site_23664 iPseU_CNN:0;iRNA_PseU:0 23665 chr13 23898587 23898587 1 + C A UCEC 23898586 + 23898566 23898606 41 CTCTGGCAGCTCACAGAGCCTCTACGAAATCTGTGTGTGTC CTCTGGCAGCTCACAGAGCCTATACGAAATCTGTGTGTGTC < 41bp 0.465017487127984 0.820561488663984 0.38221127 0.5963669 prediction 0.641122977327968 Functional Gain - SGCG ENSG00000102683 CDS Human protein_coding chr13:23898586 chr13:23898587 synonymous SNV . 0 22 hPsi_associated_SNPs_29941 0 0 0 0 1 unknown 0.438718563671314 0.43865139248848 0.1927338 0 hPsi_site_23665 iPseU_CNN:0.1927338;iRNA_PseU:0 23666 chr12 49314778 49314778 1 + G T LUAD 49314777 + 49314757 49314797 41 AACCGAAGAAGAAAAAGTGCTGCCTTTTTATTCATCAGTAT AACCGAAGAAGAAAAAGTGCTTCCTTTTTATTCATCAGTAT < 41bp 0.481378616223227 0.820557991113229 0.33528155 0.4335239 prediction 0.641115982226458 Functional Gain - CCDC65 ENSG00000139537 CDS Human protein_coding chr12:49314777 chr12:49314778 synonymous SNV . 0 22 hPsi_associated_SNPs_29942 0 0 0 0 1 chromatin 0.438680888820985 0.438695846204836 0 0 hPsi_site_23666 iPseU_CNN:0;iRNA_PseU:0 23667 chr1 43779471 43779471 1 + C A LUAD 43779470 + 43779450 43779490 41 GCTGCAGGCTGAGGGCCCAGTCCAAGAGAGCCGGGCAGCTG GCTGCAGGCTGAGGGCCCAGTACAAGAGAGCCGGGCAGCTG < 41bp 0.453616154496091 0.820554183249889 0.27433527 0.87706447 prediction 0.641108366499778 Functional Gain - TIE1 ENSG00000066056 CDS Human protein_coding chr1:43779470 chr1:43779471 synonymous SNV . 0 22 hPsi_associated_SNPs_29943 0 0 0 0 1 Cytosol 0.438718831324909 0.438718935387279 0.75412894 0 hPsi_site_23667 iPseU_CNN:0.75412894;iRNA_PseU:0 23668 chr22 21363317 21363317 1 + C T SKCM 21363318 - 21363298 21363338 41 CCCCCACATCCACCTCCCCCTGGCCACCTACGCCCTGGTCA CCCCCACATCCACCTCCCCCTAGCCACCTACGCCCTGGTCA < 41bp 0.431002968135097 0.820553015583862 0.06756145 0.15830478 prediction 0.641106031167724 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363318 chr22:21363317 . . 0 22 hPsi_associated_SNPs_29944 0 0 0 0 0 unknown 0.43871906483819 0.438717779198783 0 0 hPsi_site_23668 iPseU_CNN:0;iRNA_PseU:0 23669 chr16 2499869 2499869 1 + C A CESC 2499868 + 2499848 2499888 41 GCTGTGGGACCTCACCGGATTCTCCTATGAAGACCTCATTC GCTGTGGGACCTCACCGGATTATCCTATGAAGACCTCATTC < 41bp 0.559018989222486 0.879564188619254 0.34234673 0.6354756 prediction 0.641090398793535 Functional Gain - CCNF ENSG00000162063 CDS Human protein_coding chr16:2499868 chr16:2499869 nonsynonymous SNV 0.482 1 22 hPsi_associated_SNPs_29945 0 0 1 0 2 Cytosol 0.438718592993429 0.438723154114984 0.2709512 0 hPsi_site_23669 iPseU_CNN:0.2709512;iRNA_PseU:0 23670 chr1 20005543 20005543 1 + G A LAML 20005542 + 20005522 20005562 41 GCGGGCGCTGGGCAGGTTCCTGCCATGTCCACGCTGTCCCC GCGGGCGCTGGGCAGGTTCCTACCATGTCCACGCTGTCCCC < 41bp 0.575747466437976 0.896290034218018 0.32775003 0.7479963 prediction 0.641085135560084 Functional Gain - HTR6 ENSG00000158748 CDS Human protein_coding chr1:20005542 chr1:20005543 synonymous SNV . 0 22 hPsi_associated_SNPs_29946 0 0 0 0 0 Cytosol 0.438718592486692 0.438718594188516 0.4959926 0 hPsi_site_23670 iPseU_CNN:0.4959926;iRNA_PseU:0 23671 chr12 6646936 6646936 1 + G T STAD 6646935 + 6646915 6646955 41 ATGGCCTTCCGTGTCCCCACTGCCAACGTGTCAGTGGTGGA ATGGCCTTCCGTGTCCCCACTTCCAACGTGTCAGTGGTGGA < 41bp 0.481152381236416 0.820542556864281 0.20732868 0.44346556 prediction 0.641085113728562 Functional Gain - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646935 chr12:6646936 nonsynonymous SNV 0.991 1 22 hPsi_associated_SNPs_29947 0 0 1 0 0 Ribosome 0.396696260492913 0.436403363467691 0 0 hPsi_site_23671 iPseU_CNN:0;iRNA_PseU:0 23672 chr10 124742935 124742935 1 + G T LUSC 124742934 + 124742914 124742954 41 CCAACCCTGAGAAAAATGCTTGGGAACACAACAGCCTCACA CCAACCCTGAGAAAAATGCTTTGGAACACAACAGCCTCACA < 41bp 0.525760028109305 0.846298210169763 0.5709345 0.7698059 prediction 0.641076364120917 Functional Gain - PSTK ENSG00000179988 CDS Human protein_coding chr10:124742934 chr10:124742935 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_29948 0 0 0 0 1 nucleus 0.4387322152007 0.439882691951723 0.3977428 0 hPsi_site_23672 iPseU_CNN:0.3977428;iRNA_PseU:0 23673 chr10 8097765 8097765 1 + G A COAD 8097764 + 8097744 8097784 41 GCTGCCGGAGGAGGTGGATGTGCTTTTTAACATCGACGGTC GCTGCCGGAGGAGGTGGATGTACTTTTTAACATCGACGGTC < 41bp 0.590785683905705 0.911320866805649 0.31007537 0.79299295 prediction 0.641070365799887 Functional Gain - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8097764 chr10:8097765 synonymous SNV . 0 22 hPsi_associated_SNPs_29949 0 0 0 0 1 Cytosol 0.438717990460159 0.438718721377781 0.5859859 0 hPsi_site_23673 iPseU_CNN:0.5859859;iRNA_PseU:0 23674 chr3 100059959 100059959 1 + G A UCEC 100059958 + 100059938 100059978 41 CTGGGAAATTATATAACACCTGTGCTGTGTTTGGGCCTGAT CTGGGAAATTATATAACACCTATGCTGTGTTTGGGCCTGAT < 41bp 0.411738313914787 0.820532317718554 0.2980109 0.3006489 prediction 0.641064635437107 Functional Gain - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100059958 chr3:100059959 nonsynonymous SNV 0.971 4 22 hPsi_associated_SNPs_29950 0 0 1 0 2 Ribosome 0.438718592995074 0.438718593024432 0 0 hPsi_site_23674 iPseU_CNN:0;iRNA_PseU:0 23675 chr8 56686242 56686242 1 + G A KIRP 56686241 + 56686221 56686261 41 TCATTGAGGAGCGGGAGGATTGTAAGATACTGTGCCTTTGC TCATTGAGGAGCGGGAGGATTATAAGATACTGTGCCTTTGC < 41bp 0.564366112043227 0.884897484750335 0.6014782 0.64503026 prediction 0.641062745414216 Functional Gain - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56686241 chr8:56686242 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_29951 0 0 1 0 1 Nucleus 0.43871872004521 0.43872766400377 0.08710412 0 hPsi_site_23675 iPseU_CNN:0.08710412;iRNA_PseU:0 23676 chr19 17837512 17837512 1 + G A rs12983721 17837511 + 17837491 17837531 41 CCGGTTGCACCCCGCCCGCCTGCCTCCTGGACGGCCTGGTC CCGGTTGCACCCCGCCCGCCTACCTCCTGGACGGCCTGGTC < 41bp 0.40325175089523 0.820528403350676 0.29863182 0.6999659 prediction 0.641056806701352 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837511 chr19:17837512 nonsynonymous SNV 0.010 1 22 hPsi_associated_SNPs_29952 0 0 1 0 0 Cytosol 0.438718955455465 0.438813007995916 0.3999318 0 hPsi_site_23676 iPseU_CNN:0.3999318;iRNA_PseU:0 23677 chr19 45781824 45781824 1 + G A LUSC 45781823 + 45781803 45781843 41 CGGCTATGAGGGTGAGGAGTTGAAGCCATACACAGAGCCCG CGGCTATGAGGGTGAGGAGTTAAAGCCATACACAGAGCCCG < 41bp 0.589236987385315 0.909764436533919 0.7058062 0.8605959 prediction 0.641054898297208 Functional Gain - MARK4 ENSG00000007047 CDS Human protein_coding chr19:45781823 chr19:45781824 synonymous SNV . 0 22 hPsi_associated_SNPs_29953 0 0 1 0 2 Nucleus 0.437138180795426 0.438719505347713 0.3095794 0 hPsi_site_23677 iPseU_CNN:0.3095794;iRNA_PseU:0 23678 chr20 35177578 35177578 1 + G T UCEC 35177577 + 35177557 35177597 41 ATGTACCGGGAGGCACCCATTGATAAGAAAGGCAACTTCAA ATGTACCGGGAGGCACCCATTTATAAGAAAGGCAACTTCAA < 41bp 0.488935841104829 0.820522481495634 0.3909777 0.6856197 prediction 0.641044962991268 Functional Gain - MYL9 ENSG00000101335 CDS Human protein_coding chr20:35177577 chr20:35177578 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29954 0 0 0 0 1 Cytosol 0.438721116630651 0.438702750165409 0.3712394 0 hPsi_site_23678 iPseU_CNN:0.3712394;iRNA_PseU:0 23679 chr2 143676221 143676221 1 + C A GBM 143676220 + 143676200 143676240 41 AGATGAAAATGCCATCTATTTCTTGGGAAATTCTCTTGGCC AGATGAAAATGCCATCTATTTATTGGGAAATTCTCTTGGCC < 41bp 0.467268837194464 0.820520341535005 0.35933653 0.62510335 prediction 0.64104068307001 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143676220 chr2:143676221 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_29955 0 0 1 0 2 Nucleus 0.438552994975603 0.438791399261007 0.2502067 0 hPsi_site_23679 iPseU_CNN:0.2502067;iRNA_PseU:0 23680 chr10 122650314 122650314 1 + C A COAD 122650313 + 122650293 122650333 41 GTGTACGTCAGATAAAGTGATCTTGGCCTCAGATGATGGGT GTGTACGTCAGATAAAGTGATATTGGCCTCAGATGATGGGT < 41bp 0.45118346802897 0.820518210822757 0.3168154 0.42046875 prediction 0.641036421645515 Functional Gain - WDR11 ENSG00000120008 CDS Human protein_coding chr10:122650313 chr10:122650314 synonymous SNV . 0 22 hPsi_associated_SNPs_29956 0 0 1 0 2 Nucleus 0.424348970760305 0.43221144598012 0 0 hPsi_site_23680 iPseU_CNN:0;iRNA_PseU:0 23681 chr19 36370026 36370026 1 + C A LIHC 36370025 + 36370005 36370045 41 GGCTGTGTCGGGTCTGCTGATCATGGGAGCGGGCGGAGGCT GGCTGTGTCGGGTCTGCTGATAATGGGAGCGGGCGGAGGCT < 41bp 0.44657227234729 0.820515176228979 0.2314476 0.31287163 prediction 0.641030352457957 Functional Gain - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370025 chr19:36370026 synonymous SNV . 0 22 hPsi_associated_SNPs_29957 0 0 1 0 2 Endoplasmic reticulum 0.438682781890162 0.438706838110036 0 0 hPsi_site_23681 iPseU_CNN:0;iRNA_PseU:0 23682 chr19 50363277 50363277 1 + G T OV 50363276 + 50363256 50363296 41 ACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATG ACTTTTCCTACAAAGCATCGTTTGAGATCCGCGTGCTTATG < 41bp 0.484991026174651 0.82051476674511 0.2709762 0.550165 prediction 0.641029533490221 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50363276 chr19:50363277 nonsynonymous SNV 0.822 4 22 hPsi_associated_SNPs_29958 0 0 1 2 1 Ribosome 0.438749054687022 0.438728776353907 0.10033 0 hPsi_site_23682 iPseU_CNN:0.10033;iRNA_PseU:0 23683 chr3 38287675 38287675 1 + C A HNSC 38287674 + 38287654 38287694 41 CTACACAGCCAACTCAAGTCTCTCTCCCACCCACCGCAGAG CTACACAGCCAACTCAAGTCTATCTCCCACCCACCGCAGAG < 41bp 0.443003977838711 0.820512347401596 0.31695598 0.6674727 prediction 0.641024694803193 Functional Gain - OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38287674 chr3:38287675 nonsynonymous SNV 0.989 1 22 hPsi_associated_SNPs_29959 0 0 1 0 1 Ribosome 0.438714366326311 0.438718637887817 0.3349454 0 hPsi_site_23683 iPseU_CNN:0.3349454;iRNA_PseU:0 23684 chr4 188924576 188924576 1 + G A ESCA 188924575 + 188924555 188924595 41 GTTGAGGAATAGAGCTGCCCTGAGAAAGCATCTCCTCATTC GTTGAGGAATAGAGCTGCCCTAAGAAAGCATCTCCTCATTC < 41bp 0.402101436907351 0.820510560224588 0.24456164 0.3199665 prediction 0.641021120449176 Functional Gain - ZFP42 ENSG00000179059 CDS Human protein_coding chr4:188924575 chr4:188924576 synonymous SNV . 0 22 hPsi_associated_SNPs_29960 0 0 0 0 0 Nucleus 0.438881335301011 0.438780475651413 0 0 hPsi_site_23684 iPseU_CNN:0;iRNA_PseU:0 23685 chr10 70099279 70099279 1 + G A UCEC 70099278 + 70099258 70099298 41 TTTCGTACATATGAGAGGGTTGCCTTTTCGTGCAACTGAAA TTTCGTACATATGAGAGGGTTACCTTTTCGTGCAACTGAAA < 41bp 0.575943385918356 0.896453686639816 0.13195959 0.2750567 prediction 0.641020601442919 Functional Gain - HNRNPH3 ENSG00000096746 CDS Human protein_coding chr10:70099278 chr10:70099279 synonymous SNV . 0 22 hPsi_associated_SNPs_29961 0 0 1 0 2 Cytosol 0.438718276791339 0.438712776967324 0 0 hPsi_site_23685 iPseU_CNN:0;iRNA_PseU:0 23686 chr3 196387351 196387351 1 + G A ESCA 196387350 + 196387330 196387370 41 CAAGTTGCGGACCCTCCTGCTGCGCGACAACAACATGGGCT CAAGTTGCGGACCCTCCTGCTACGCGACAACAACATGGGCT < 41bp 0.390725937276686 0.820509956091323 0.22250605 0.82792616 prediction 0.641019912182645 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196387350 chr3:196387351 synonymous SNV . 0 22 hPsi_associated_SNPs_29962 0 0 0 0 0 chromatin 0.438654181264283 0.438734910680367 0.65585232 0 hPsi_site_23686 iPseU_CNN:0.65585232;iRNA_PseU:0 23687 chr1 247752001 247752001 1 + G A BLCA 247752000 + 247751980 247752020 41 TCCCATGCCCTGGGATCCACTGAGTGCGTCCTCCCGGCTGT TCCCATGCCCTGGGATCCACTAAGTGCGTCCTCCCGGCTGT < 41bp 0.424618801823688 0.820507469960083 0.22738427 0.25449204 prediction 0.641014939920165 Functional Gain - OR2G2 ENSG00000177489 CDS Human protein_coding chr1:247752000 chr1:247752001 nonsynonymous SNV 0.002 3 22 hPsi_associated_SNPs_29963 0 0 0 0 0 unknown 0.438719718813806 0.438719566009478 0 0 hPsi_site_23687 iPseU_CNN:0;iRNA_PseU:0 23688 chr19 49843570 49843570 1 + C A LUAD 49843569 + 49843549 49843589 41 GGACCACGTCTACAACCGGCTCGCTCGATACCGTTAGGCCC GGACCACGTCTACAACCGGCTAGCTCGATACCGTTAGGCCC < 41bp 0.539866293498558 0.860367215753527 0.18656066 0.71535337 prediction 0.641001844509939 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49843569 chr19:49843570 synonymous SNV . 0 22 hPsi_associated_SNPs_29964 0 0 1 0 1 Endoplasmic reticulum 0.438704743134442 0.438737346137786 0.43070674 0 hPsi_site_23688 iPseU_CNN:0.43070674;iRNA_PseU:0 23689 chr3 141497288 141497288 1 + G A BLCA 141497287 + 141497267 141497307 41 GCTCCGCCAGAAGCTGTCCCTGAACTTCCACAGCCTGTGTG GCTCCGCCAGAAGCTGTCCCTAAACTTCCACAGCCTGTGTG < 41bp 0.407256810054086 0.820498871141817 0.29817384 0.4855221 prediction 0.640997742283635 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141497287 chr3:141497288 synonymous SNV . 0 22 hPsi_associated_SNPs_29965 0 0 0 0 0 exosome 0.438718590797329 0.438702356764846 0 0 hPsi_site_23689 iPseU_CNN:0;iRNA_PseU:0 23690 chr12 100731227 100731227 1 + G A BLCA 100731226 + 100731206 100731246 41 ACAAGAGCAGGCACAGAAGCTGAAAAGCCAGCAGCCTCTTA ACAAGAGCAGGCACAGAAGCTAAAAAGCCAGCAGCCTCTTA < 41bp 0.406377564584977 0.820497647033895 0.33603323 0.5160669 prediction 0.64099529406779 Functional Gain - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100731226 chr12:100731227 synonymous SNV . 0 22 hPsi_associated_SNPs_29966 0 0 0 0 1 chromatin 0.437138611966563 0.433478090985504 0.0321338 0 hPsi_site_23690 iPseU_CNN:0.0321338;iRNA_PseU:0 23691 chr20 3888763 3888763 1 + G A rs71647837 3888762 + 3888742 3888782 41 GCACCTCGAGCTGAAGGACCTGACTCTGTGTGGACGCAAAG GCACCTCGAGCTGAAGGACCTAACTCTGTGTGGACGCAAAG < 41bp 0.396687399643058 0.820497276069817 0.21175772 0.274405 prediction 0.640994552139634 Functional Gain - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888762 chr20:3888763 synonymous SNV . 0 22 hPsi_associated_SNPs_29967 0 0 1 0 0 Ribosome 0.438725857004799 0.438731356208158 0 0 hPsi_site_23691 iPseU_CNN:0;iRNA_PseU:0 23692 chr10 77163586 77163586 1 + C A rs577420198 77163585 + 77163565 77163605 41 GGGGCTGGGAGCTCTGGGAGTCGGGAGCCAGTCTGTGCCCG GGGGCTGGGAGCTCTGGGAGTAGGGAGCCAGTCTGTGCCCG < 41bp 0.479414149575836 0.820496092027315 0.21954128 0.3276075 prediction 0.64099218405463 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77163585 chr10:77163586 . . 0 22 hPsi_associated_SNPs_29968 0 0 1 0 0 unknown 0.438718592995097 0.43871859299503 0 0 hPsi_site_23692 iPseU_CNN:0;iRNA_PseU:0 23693 chr16 2135254 2135254 1 + G A UCEC 2135253 + 2135233 2135273 41 ACAGTCCTTTGAGCGGTCGGTGCAGCTCCTCGACCAGATCC ACAGTCCTTTGAGCGGTCGGTACAGCTCCTCGACCAGATCC < 41bp 0.579557265939414 0.900052314760108 0.7178307 0.98173153 prediction 0.640990097641387 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2135253 chr16:2135254 synonymous SNV . 0 22 hPsi_associated_SNPs_29969 0 0 1 0 2 Endoplasmic reticulum 0.438720095284856 0.438701986681909 0.52780166 0 hPsi_site_23693 iPseU_CNN:0.52780166;iRNA_PseU:0 23694 chr22 41546158 41546158 1 + C A rs148884710 41546157 + 41546137 41546177 41 CAGAGCACAGCAGCGTCTGTTCCTACCCCAACAGCACCGCT CAGAGCACAGCAGCGTCTGTTACTACCCCAACAGCACCGCT < 41bp 0.54687665357916 0.867370680600685 0.7392231 0.7904062 prediction 0.640988054043051 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41546157 chr22:41546158 nonsynonymous SNV 0.979 2 22 hPsi_associated_SNPs_29970 3 0 1 0 1 Cytosol 0.438691321432503 0.43895765696252 0.1023662 0 hPsi_site_23694 iPseU_CNN:0.1023662;iRNA_PseU:0 23695 chr6 4892197 4892197 1 + C A UCEC 4892196 + 4892176 4892216 41 GATCCACCAACAGCAACTTTTCTAAGACCTCTCCTAAGGCA GATCCACCAACAGCAACTTTTATAAGACCTCTCCTAAGGCA < 41bp 0.540353113164177 0.860845104261776 0.7887236 0.7789228 prediction 0.640983982195198 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892196 chr6:4892197 nonsynonymous SNV 0.977 3 22 hPsi_associated_SNPs_29971 0 0 1 0 0 Cytoplasm 0.438718600480212 0.438693841166621 0 0 hPsi_site_23695 iPseU_CNN:0;iRNA_PseU:0 23696 chr1 179783283 179783283 1 + G A LUSC 179783282 + 179783262 179783302 41 ACCTGGCCAGGCTCTGGGCGTGAGGCCTTCACCAATCCAAG ACCTGGCCAGGCTCTGGGCGTAAGGCCTTCACCAATCCAAG < 41bp 0.405978071098093 0.820491124000909 0.32009977 0.563636 prediction 0.640982248001818 Functional Gain - FAM163A ENSG00000143340 CDS Human protein_coding chr1:179783282 chr1:179783283 nonsynonymous SNV 0.993 4 22 hPsi_associated_SNPs_29972 0 0 0 0 0 exosome 0.438718592981079 0.438718592995103 0.127272 0 hPsi_site_23696 iPseU_CNN:0.127272;iRNA_PseU:0 23697 chr11 125237789 125237789 1 + C A UCEC 125237788 + 125237768 125237808 41 CAAGGCCCAGGCTGTCCACATCTCTGCCCCCTCAGCTGCTG CAAGGCCCAGGCTGTCCACATATCTGCCCCCTCAGCTGCTG < 41bp 0.449862717503236 0.820490472171447 0.43610796 0.66908264 prediction 0.640980944342895 Functional Gain - PKNOX2 ENSG00000165495 CDS Human protein_coding chr11:125237788 chr11:125237789 synonymous SNV . 0 22 hPsi_associated_SNPs_29973 0 0 1 0 2 exosome 0.438718449432999 0.438716224790017 0.33816528 0 hPsi_site_23697 iPseU_CNN:0.33816528;iRNA_PseU:0 23698 chr11 55111006 55111006 1 + C A LUSC 55111005 + 55110985 55111025 41 CTTACTTGGTGGTGCAGAGGTCTTCCTTTTGGTGGTGATGG CTTACTTGGTGGTGCAGAGGTATTCCTTTTGGTGGTGATGG < 41bp 0.477451787825731 0.820489633172782 0.3233856 0.4598783 prediction 0.640979266345565 Functional Gain - OR4A16 ENSG00000181961 CDS Human protein_coding chr11:55111005 chr11:55111006 synonymous SNV . 0 22 hPsi_associated_SNPs_29974 0 0 0 0 0 unknown 0.438718578411661 0.438718571614571 0 0 hPsi_site_23698 iPseU_CNN:0;iRNA_PseU:0 23699 chr6 87725747 87725747 1 + C A COAD 87725746 + 87725726 87725766 41 GAAGCACAGATAGCCAGAATTCTTTTGCAAGTTGTAAACTT GAAGCACAGATAGCCAGAATTATTTTGCAAGTTGTAAACTT < 41bp 0.541597830147054 0.862081682611561 0.35051185 0.41117597 prediction 0.640967704929015 Functional Gain - HTR1E ENSG00000168830 CDS Human protein_coding chr6:87725746 chr6:87725747 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_29975 0 0 0 0 0 unknown 0.439250710339764 0.43847613636638 0 0 hPsi_site_23699 iPseU_CNN:0;iRNA_PseU:0 23700 chr12 122219030 122219030 1 + C T STAD 122219031 - 122219011 122219051 41 CACCTCGTGCTCATCTGCTATGACGTCATGAATCCCACCAG CACCTCGTGCTCATCTGCTATAACGTCATGAATCCCACCAG < 41bp 0.390865835565231 0.820483272362228 0.302995 0.4275027 prediction 0.640966544724456 Functional Gain - RHOF ENSG00000139725 CDS Human protein_coding chr12:122219031 chr12:122219030 nonsynonymous SNV 0.988 4 22 hPsi_associated_SNPs_29976 0 0 0 0 2 Ribosome 0.43870407280244 0.438718586126033 0 0 hPsi_site_23700 iPseU_CNN:0;iRNA_PseU:0 23701 chr11 65064737 65064737 1 + C A UCEC 65064736 + 65064716 65064756 41 TGCTGTGCAGGTCGTCAGGATCTGAGGCTTCTGTCCTCTGC TGCTGTGCAGGTCGTCAGGATATGAGGCTTCTGTCCTCTGC < 41bp 0.546320648749502 0.866803410034183 0.6359501 0.70730317 prediction 0.640965522569362 Functional Gain - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65064736 chr11:65064737 synonymous SNV . 0 22 hPsi_associated_SNPs_29977 0 0 1 0 0 Endoplasmic reticulum 0.438482394373237 0.438716691345839 0.14270614 0 hPsi_site_23701 iPseU_CNN:0.14270614;iRNA_PseU:0 23702 chr1 40432323 40432323 1 + C A LGG 40432322 + 40432302 40432342 41 CATTGTCTGTATCTATATAATCTGTGCTGTCATCCTGATCC CATTGTCTGTATCTATATAATATGTGCTGTCATCCTGATCC < 41bp 0.55432862387635 0.87480744893877 0.5786262 0.38813835 prediction 0.640957650124841 Functional Gain - MFSD2A ENSG00000168389 CDS Human protein_coding chr1:40432322 chr1:40432323 synonymous SNV . 0 22 hPsi_associated_SNPs_29978 0 0 0 0 3 Ribosome 0.438856887673404 0.43096154116978 0 0 hPsi_site_23702 iPseU_CNN:0;iRNA_PseU:0 23703 chr1 36394510 36394510 1 + C A rs193204277 36394509 + 36394489 36394529 41 TTTTGTACTATTTCTGTATTTCTTTCTTCTCAGAACAACCA TTTTGTACTATTTCTGTATTTATTTCTTCTCAGAACAACCA < 41bp 0.500438019068558 0.820916446867388 0.24966839 0.33522058 prediction 0.640956855597659 Functional Gain - AGO1;AGO3 ENSG00000092847 UTR3 Human protein_coding chr1:36394509 chr1:36394510 . . 0 22 hPsi_associated_SNPs_29979 0 0 1 0 0 unknown 0.438719234883418 0.440324607743199 0 0 hPsi_site_23703 iPseU_CNN:0;iRNA_PseU:0 23704 chr12 64891507 64891507 1 + C A UCEC 64891506 + 64891486 64891526 41 TGACCCCAATTTATCCAAGTTCTAACACATTAGTAGAAATG TGACCCCAATTTATCCAAGTTATAACACATTAGTAGAAATG < 41bp 0.524498417014963 0.844976246698973 0.3033229 0.29526126 prediction 0.640955659368019 Functional Gain - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64891506 chr12:64891507 nonsynonymous SNV 0.950 2 22 hPsi_associated_SNPs_29980 0 0 1 0 2 chromatin 0.438717786106664 0.438719199562941 0 0 hPsi_site_23704 iPseU_CNN:0;iRNA_PseU:0 23705 chr17 77042730 77042730 1 + G T TGCT 77042729 + 77042709 77042749 41 CTGTGACCCCGGTACCTCCATGTACCCGGCGACCGCCGTGC CTGTGACCCCGGTACCTCCATTTACCCGGCGACCGCCGTGC < 41bp 0.511329567718804 0.831805548692375 0.77980757 0.89445794 prediction 0.640951961947143 Functional Gain - C1QTNF1 ENSG00000173918 CDS Human protein_coding chr17:77042729 chr17:77042730 nonsynonymous SNV 0.102 0 22 hPsi_associated_SNPs_29981 0 0 0 0 2 exosome 0.438719975932556 0.438718592995102 0.22930074 0 hPsi_site_23705 iPseU_CNN:0.22930074;iRNA_PseU:0 23706 chr4 26432370 26432370 1 + G T STAD 26432369 + 26432349 26432389 41 TTTCTGCATTCCGAGAAGGTTGGAGATGGGTCCGGCAACCA TTTCTGCATTCCGAGAAGGTTTGAGATGGGTCCGGCAACCA < 41bp 0.494598120335511 0.820471047666733 0.37383997 0.67121375 prediction 0.640942095333465 Functional Gain - RBPJ ENSG00000168214 CDS Human protein_coding chr4:26432369 chr4:26432370 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_29982 0 0 1 0 1 Endoplasmic reticulum 0.439114117091009 0.438720519875621 0.3424275 0 hPsi_site_23706 iPseU_CNN:0.3424275;iRNA_PseU:0 23707 chr1 152286076 152286076 1 + G A SKCM 152286075 + 152286055 152286095 41 GATTGTGTGTCTGAGTTTTCTGAATGTCCCTCACTGTCACT GATTGTGTGTCTGAGTTTTCTAAATGTCCCTCACTGTCACT < 41bp 0.447621368823555 0.820466273808803 0.23246557 0.47296175 prediction 0.640932547617606 Functional Gain - FLG ENSG00000143631 CDS Human protein_coding chr1:152286075 chr1:152286076 nonsynonymous SNV 0.007 3 22 hPsi_associated_SNPs_29983 0 0 1 0 0 exosome 0.441259317381036 0.438716166971249 0 0 hPsi_site_23707 iPseU_CNN:0;iRNA_PseU:0 23708 chr19 2918052 2918052 1 + G A UCEC 2918051 + 2918031 2918071 41 CTGGAGAGAAGCCTTATGAGTGTAAACAATGTGGAAAAACC CTGGAGAGAAGCCTTATGAGTATAAACAATGTGGAAAAACC < 41bp 0.424744733341395 0.820464432068797 0.307514 0.6249692 prediction 0.640928864137595 Functional Gain - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2918051 chr19:2918052 nonsynonymous SNV 0.003 2 22 hPsi_associated_SNPs_29984 0 0 0 0 0 nucleoplasm 0.436929355923067 0.438718578077789 0.2499384 0 hPsi_site_23708 iPseU_CNN:0.2499384;iRNA_PseU:0 23709 chr22 29837976 29837976 1 + C A COAD 29837975 + 29837955 29837995 41 TGTCTATACATTCAGGAGTGTCTCTGCTGAGGAGCCACTGC TGTCTATACATTCAGGAGTGTATCTGCTGAGGAGCCACTGC < 41bp 0.464782298801149 0.820455422879258 0.26185763 0.41914713 prediction 0.640910845758516 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837975 chr22:29837976 synonymous SNV . 0 22 hPsi_associated_SNPs_29985 0 0 0 0 0 exosome 0.438718591926227 0.438718939493748 0 0 hPsi_site_23709 iPseU_CNN:0;iRNA_PseU:0 23710 chr1 161180475 161180475 1 + G T LUAD 161180474 + 161180454 161180494 41 GTTGAGTTTGATGTTCCTGTTGGTTCTCGAGGGGACTGCTA GTTGAGTTTGATGTTCCTGTTTGTTCTCGAGGGGACTGCTA < 41bp 0.486088291175053 0.820451543840935 0.20761365 0.28896603 prediction 0.640903087681869 Functional Gain - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161180474 chr1:161180475 nonsynonymous SNV 0.940 5 22 hPsi_associated_SNPs_29986 0 0 1 0 2 Ribosome 0.438650267634927 0.438697430532191 0 0 hPsi_site_23710 iPseU_CNN:0;iRNA_PseU:0 23711 chr20 44258477 44258477 1 + G A UCEC 44258476 + 44258456 44258496 41 GCACCCCAGACTCTGCTGCCTGTCCTGGTTCTCTGTGTGCT GCACCCCAGACTCTGCTGCCTATCCTGGTTCTCTGTGTGCT < 41bp 0.576528849337227 0.89697640799045 0.34806535 0.55552495 prediction 0.640895117306446 Functional Gain - WFDC10A ENSG00000180305 CDS Human protein_coding chr20:44258476 chr20:44258477 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_29987 0 0 0 0 0 unknown 0.438801659431959 0.43873347549256 0.1110499 0 hPsi_site_23711 iPseU_CNN:0.1110499;iRNA_PseU:0 23712 chr1 17575701 17575701 1 + G A LUAD 17575700 + 17575680 17575720 41 CGCGGTGTGTGTGGCTGGCGTGGAGACCCTCGTGGACATTT CGCGGTGTGTGTGGCTGGCGTAGAGACCCTCGTGGACATTT < 41bp 0.418608193777597 0.820446973041239 0.67052597 0.679824 prediction 0.640893946082479 Functional Gain - PADI3 ENSG00000142619 CDS Human protein_coding chr1:17575700 chr1:17575701 synonymous SNV . 0 22 hPsi_associated_SNPs_29988 0 0 0 0 1 unknown 0.43870194373589 0.401646847754238 0.0185960599999999 0 hPsi_site_23712 iPseU_CNN:0.0185960599999999;iRNA_PseU:0 23713 chr9 135458279 135458279 1 + G A UCEC 135458278 + 135458258 135458298 41 GGGACCCCTTGCTCGGGGACTGCCGTTCGCCCCTGGAGCTG GGGACCCCTTGCTCGGGGACTACCGTTCGCCCCTGGAGCTG < 41bp 0.57604108525679 0.896487909925775 0.25194257 0.55636495 prediction 0.64089364933797 Functional Gain - BARHL1 ENSG00000125492 CDS Human protein_coding chr9:135458278 chr9:135458279 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29989 0 0 0 0 0 unknown 0.438718593044286 0.438718592995102 0.1127299 0 hPsi_site_23713 iPseU_CNN:0.1127299;iRNA_PseU:0 23714 chr2 190742109 190742109 1 + G A UCEC 190742108 + 190742088 190742128 41 GGAAATGAAATTAAAGAGTGTGTTCATGGTCGCCCATTTTT GGAAATGAAATTAAAGAGTGTATTCATGGTCGCCCATTTTT < 41bp 0.444073356075436 0.820444506621083 0.34297127 0.6129847 prediction 0.640889013242166 Functional Gain - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190742108 chr2:190742109 nonsynonymous SNV 0.991 3 22 hPsi_associated_SNPs_29990 0 0 1 0 0 Nucleus 0.438718592965841 0.438718592993474 0.2259694 0 hPsi_site_23714 iPseU_CNN:0.2259694;iRNA_PseU:0 23715 chr5 149584171 149584171 1 + G T SARC 149584170 + 149584150 149584190 41 TGGTGGTGGTTATCACCACGTGCCTTGCCGTGACACGGGTG TGGTGGTGGTTATCACCACGTTCCTTGCCGTGACACGGGTG < 41bp 0.494031110279339 0.820435010534367 0.17957926 0.6740705 prediction 0.640870021068734 Functional Gain - SLC6A7 ENSG00000011083 CDS Human protein_coding chr5:149584170 chr5:149584171 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_29991 0 0 0 0 2 exosome 0.438155625316705 0.438705140847781 0.348141 0 hPsi_site_23715 iPseU_CNN:0.348141;iRNA_PseU:0 23716 chr20 3893185 3893185 1 + C A UCEC 3893184 + 3893164 3893204 41 AAGAAGCTCTTGAAATGGCATCTCGTGGAGATAGCACCAAA AAGAAGCTCTTGAAATGGCATATCGTGGAGATAGCACCAAA < 41bp 0.449332423577912 0.820434691152621 0.43357348 0.6223996 prediction 0.640869382305242 Functional Gain - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3893184 chr20:3893185 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_29992 0 0 1 1 2 Ribosome 0.438718802127382 0.438718657535299 0.2447992 0 hPsi_site_23716 iPseU_CNN:0.2447992;iRNA_PseU:0 23717 chr9 80923366 80923366 1 + G A LUSC 80923365 + 80923345 80923385 41 GCTGGTGCCCAGAAGAATGTTGGCTCTGCTGGGGTCACCGT GCTGGTGCCCAGAAGAATGTTAGCTCTGCTGGGGTCACCGT < 41bp 0.587615281730484 0.908044292247369 0.19157955 0.31407678 prediction 0.640858021033769 Functional Gain - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80923365 chr9:80923366 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_29993 0 0 1 0 1 Ribosome 0.438718802134578 0.438655519133655 0 0 hPsi_site_23717 iPseU_CNN:0;iRNA_PseU:0 23718 chr7 49951753 49951753 1 + G A STAD 49951752 + 49951732 49951772 41 GAATCGAGCGGCAGGCCATGTGCACGAGACATGAATGCAGG GAATCGAGCGGCAGGCCATGTACACGAGACATGAATGCAGG < 41bp 0.432932019848197 0.820427493485157 0.2918498 0.7306186 prediction 0.640854986970314 Functional Gain - VWC2 ENSG00000188730 CDS Human protein_coding chr7:49951752 chr7:49951753 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_29994 0 0 0 0 0 exosome 0.439764242871949 0.43954581963603 0.4612372 0 hPsi_site_23718 iPseU_CNN:0.4612372;iRNA_PseU:0 23719 chr8 1905402 1905402 1 + C A GBM 1905401 + 1905381 1905421 41 GCTGGCGCCGACCGTCATGGTCTGGCAGATCCCTCTGCTGA GCTGGCGCCGACCGTCATGGTATGGCAGATCCCTCTGCTGA < 41bp 0.456136312703208 0.820425158026497 0.336582 0.7977818 prediction 0.640850316052994 Functional Gain - ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1905401 chr8:1905402 synonymous SNV . 0 22 hPsi_associated_SNPs_29995 0 0 0 0 0 Nucleus 0.438497976420861 0.438798992694111 0.5955636 0 hPsi_site_23719 iPseU_CNN:0.5955636;iRNA_PseU:0 23720 chr14 101455479 101455479 1 + G A SKCM 101455478 + 101455458 101455498 41 GAACAATCCTGGATCGATGATGACTGCTGGTGGCGTATGAG GAACAATCCTGGATCGATGATAACTGCTGGTGGCGTATGAG < 41bp 0.48030402912128 0.820424374415416 0.23296013 0.41588247 prediction 0.640848748830831 Functional Gain - SNORD114-28 ENSG00000200480 ncRNA_exonic Human snoRNA chr14:101455478 chr14:101455479 . . 0 22 hPsi_associated_SNPs_29996 0 0 0 0 0 unknown 0.438888883884965 0.438849727370132 0 0 hPsi_site_23720 iPseU_CNN:0;iRNA_PseU:0 23721 chr9 27192616 27192616 1 + C A UCEC 27192615 + 27192595 27192635 41 TGAGACGCTTCACAACAGCTTCTATCGGTCAGTGGAAGCCA TGAGACGCTTCACAACAGCTTATATCGGTCAGTGGAAGCCA < 41bp 0.556926181722899 0.877350381028401 0.3044652 0.33444303 prediction 0.640848398611004 Functional Gain - TEK ENSG00000120156 CDS Human protein_coding chr9:27192615 chr9:27192616 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_29997 0 0 0 0 1 nucleoplasm 0.438989163678639 0.438845053712458 0 0 hPsi_site_23721 iPseU_CNN:0;iRNA_PseU:0 23722 chr15 90763078 90763078 1 + G A UCEC 90763077 + 90763057 90763097 41 GCCGCTCAGCGGCAGTCACCTGTTCACCTGTGGCACAGCAG GCCGCTCAGCGGCAGTCACCTATTCACCTGTGGCACAGCAG < 41bp 0.394781970278439 0.820421670063478 0.25422353 0.3553337 prediction 0.640843340126957 Functional Gain - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90763077 chr15:90763078 nonsynonymous SNV 0.969 0 22 hPsi_associated_SNPs_29998 0 0 1 0 2 chromatin 0.438990401391101 0.438220635478245 0 0 hPsi_site_23722 iPseU_CNN:0;iRNA_PseU:0 23723 chr4 189060960 189060960 1 + C A HNSC 189060959 + 189060939 189060979 41 GCATCGCCAGGCAGCTCCGGTCCCAGGTGCTGCAGAGCGAG GCATCGCCAGGCAGCTCCGGTACCAGGTGCTGCAGAGCGAG < 41bp 0.547846157112892 0.868267364695616 0.24138442 0.7283025 prediction 0.640842415165448 Functional Gain - TRIML1 ENSG00000184108 CDS Human protein_coding chr4:189060959 chr4:189060960 nonsynonymous SNV 0.197 2 22 hPsi_associated_SNPs_29999 0 0 0 0 0 nucleus 0.438723125430052 0.438630163181742 0.456605 0 hPsi_site_23723 iPseU_CNN:0.456605;iRNA_PseU:0 23724 chr6 29365239 29365239 1 + C A UCEC 29365238 + 29365218 29365258 41 ATTCTTTTCTATGCACCTGTTCTTTTCACCTATATCCATCC ATTCTTTTCTATGCACCTGTTATTTTCACCTATATCCATCC < 41bp 0.527447814490653 0.847866927010611 0.51166576 0.518938 prediction 0.640838225039915 Functional Gain - OR12D2 ENSG00000168787 CDS Human other chr6:29365238 chr6:29365239 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_30000 0 0 0 0 0 unknown 0.438720024610432 0.438672128004529 0.0145444800000001 0 hPsi_site_23724 iPseU_CNN:0.0145444800000001;iRNA_PseU:0 23725 chr6 130762912 130762912 1 + G A COAD 130762911 + 130762891 130762931 41 AGGTTGCTTGTGCCCCAAGTTGCCATCAAAAAGGACTTTAC AGGTTGCTTGTGCCCCAAGTTACCATCAAAAAGGACTTTAC < 41bp 0.567517673381775 0.887930785425001 0.23092827 0.30145437 prediction 0.640826224086452 Functional Gain - TMEM200A ENSG00000164484 CDS Human protein_coding chr6:130762911 chr6:130762912 nonsynonymous SNV 0.720 0 22 hPsi_associated_SNPs_30001 0 0 0 0 0 exosome 0.438720807302195 0.438721232863228 0 0 hPsi_site_23725 iPseU_CNN:0;iRNA_PseU:0 23726 chr20 35236156 35236156 1 + C A UCEC 35236155 + 35236135 35236175 41 GATCTACTGGTTCCGACAGATCATTGCTGTGGTCCTGGGTG GATCTACTGGTTCCGACAGATAATTGCTGTGGTCCTGGGTG < 41bp 0.536216062111664 0.856623543289694 0.27839452 0.4437552 prediction 0.640814962356061 Functional Gain - C20orf24;TGIF2-C20orf24 ENSG00000101084;ENSG00000259399 CDS Human other chr20:35236155 chr20:35236156 synonymous SNV . 0 22 hPsi_associated_SNPs_30002 0 0 1 1 1 unknown 0.438718592346227 0.438718592339286 0 0 hPsi_site_23726 iPseU_CNN:0;iRNA_PseU:0 23727 chr10 82112267 82112267 1 + C A UCEC 82112266 + 82112246 82112286 41 AAATCCACAATGCTAAATATTCTATCGGATCCACTGGGCGA AAATCCACAATGCTAAATATTATATCGGATCCACTGGGCGA < 41bp 0.540256052039936 0.860663215647301 0.4381914 0.69372773 prediction 0.640814327214731 Functional Gain - DYDC1 ENSG00000170788 CDS Human protein_coding chr10:82112266 chr10:82112267 stopgain 0.997 1 22 hPsi_associated_SNPs_30003 0 0 0 0 1 exosome 0.438493588544012 0.437218483144148 0.38745546 0 hPsi_site_23727 iPseU_CNN:0.38745546;iRNA_PseU:0 23728 chr3 122060327 122060327 1 + C A READ 122060326 + 122060306 122060346 41 ATATATGCACTTGAAAGTATTCAAAAGTCTTCCCGGACAAA ATATATGCACTTGAAAGTATTAAAAAGTCTTCCCGGACAAA < 41bp 0.482966821109618 0.820406817070859 0.5363041 0.43811986 prediction 0.640813634141718 Functional Gain - CSTA ENSG00000121552 CDS Human protein_coding chr3:122060326 chr3:122060327 nonsynonymous SNV 0.002 0 22 hPsi_associated_SNPs_30004 0 0 0 0 1 exosome 0.438804858808062 0.438722829317196 0 0 hPsi_site_23728 iPseU_CNN:0;iRNA_PseU:0 23729 chr3 148877896 148877896 1 + C A UCEC 148877895 + 148877875 148877915 41 CCAAAGCAAGTGCCCCATATTCTCTGTAGTCCTTCTATGAA CCAAAGCAAGTGCCCCATATTATCTGTAGTCCTTCTATGAA < 41bp 0.447875934014802 0.820403054429459 0.268738 0.2959733 prediction 0.640806108858917 Functional Gain - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148877895 chr3:148877896 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_30005 0 0 0 2 0 Ribosome 0.43871986929797 0.438718624086683 0 0 hPsi_site_23729 iPseU_CNN:0;iRNA_PseU:0 23730 chr11 75480097 75480097 1 + G A rs146363434 75480096 + 75480076 75480116 41 GGCGAGCGTCAGGCCGAGGCTGACCGGAGCCAGCGCTCTCA GGCGAGCGTCAGGCCGAGGCTAACCGGAGCCAGCGCTCTCA < 41bp 0.417430115501443 0.820399293992411 0.3726784 0.6005644 prediction 0.640798587984822 Functional Gain - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75480096 chr11:75480097 nonsynonymous SNV 0.089 0 22 hPsi_associated_SNPs_30006 0 0 1 0 1 Ribosome 0.438734722786173 0.438749916801726 0.2011288 0 hPsi_site_23730 iPseU_CNN:0.2011288;iRNA_PseU:0 23731 chr16 55362948 55362948 1 + C A UCEC 55362947 + 55362927 55362967 41 TGGAGAAACCGCGCATCTGGTCTCTGGCGCACACCGCGACA TGGAGAAACCGCGCATCTGGTATCTGGCGCACACCGCGACA < 41bp 0.55869827488495 0.879096015992486 0.20031708 0.7774496 prediction 0.640795482215071 Functional Gain - IRX6 ENSG00000159387 CDS Human protein_coding chr16:55362947 chr16:55362948 nonsynonymous SNV 0.958 5 22 hPsi_associated_SNPs_30007 0 0 0 0 0 exosome 0.438718631367282 0.438719268723681 0.5548992 0 hPsi_site_23731 iPseU_CNN:0.5548992;iRNA_PseU:0 23732 chr9 133986990 133986990 1 + C A UCEC 133986989 + 133986969 133987009 41 CTCTCACCTCTTTAGGAGTTTCTGTGTGACCAGAAGTACAG CTCTCACCTCTTTAGGAGTTTATGTGTGACCAGAAGTACAG < 41bp 0.441963827846405 0.820394057212792 0.2690705 0.3114925 prediction 0.640788114425584 Functional Gain - AIF1L ENSG00000126878 CDS Human protein_coding chr9:133986989 chr9:133986990 nonsynonymous SNV 0.994 3 22 hPsi_associated_SNPs_30008 0 0 1 0 2 Cytosol 0.438718592996367 0.438718593929493 0 0 hPsi_site_23732 iPseU_CNN:0;iRNA_PseU:0 23733 chr7 105190771 105190771 1 + C A LGG 105190770 + 105190750 105190790 41 TTAGCCACTGATATTCCTTGTCTGCTATATGATGACAATCT TTAGCCACTGATATTCCTTGTATGCTATATGATGACAATCT < 41bp 0.551952194149055 0.872344615857235 0.3047068 0.37353748 prediction 0.640784843416359 Functional Gain - RINT1 ENSG00000135249 CDS Human protein_coding chr7:105190770 chr7:105190771 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_30009 0 0 1 0 1 Nucleus 0.438719862405527 0.431088577501542 0 0 hPsi_site_23733 iPseU_CNN:0;iRNA_PseU:0 23734 chr6 32714123 32714123 1 + C A STAD 32714122 + 32714102 32714142 41 GGTGGGCACTGTCTTCATCATCCAAGGCCTGCGTTCAGTTG GGTGGGCACTGTCTTCATCATACAAGGCCTGCGTTCAGTTG < 41bp 0.457112642860869 0.820390271456097 0.3079695 0.6344553 prediction 0.640780542912193 Functional Gain - HLA-DQA2 ENSG00000237541 CDS Human protein_coding chr6:32714122 chr6:32714123 synonymous SNV . 0 22 hPsi_associated_SNPs_30010 0 0 0 0 1 exosome 0.438718592994915 0.438718590658285 0.2689106 0 hPsi_site_23734 iPseU_CNN:0.2689106;iRNA_PseU:0 23735 chr14 101195311 101195311 1 + G A UCEC 101195310 + 101195290 101195330 41 AGGGTCCCCTTTGTGACCAGTGCGTGACCTCTCCCGGCTGC AGGGTCCCCTTTGTGACCAGTACGTGACCTCTCCCGGCTGC < 41bp 0.587815378291306 0.90820412133801 0.24274537 0.82475007 prediction 0.640777486093408 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195310 chr14:101195311 nonsynonymous SNV 0.153 4 22 hPsi_associated_SNPs_30011 0 0 1 0 2 Endoplasmic reticulum 0.438718559565773 0.438713709309493 0.64950014 0 hPsi_site_23735 iPseU_CNN:0.64950014;iRNA_PseU:0 23736 chr11 49974428 49974428 1 + C A COAD 49974427 + 49974407 49974447 41 GTGTCATGGGTAGGAGGCTTTCTTCATGCAACCATACAGAT GTGTCATGGGTAGGAGGCTTTATTCATGCAACCATACAGAT < 41bp 0.527109806865219 0.847497434344418 0.45280012 0.83090174 prediction 0.640775254958398 Functional Gain - OR4C13 ENSG00000258817 CDS Human protein_coding chr11:49974427 chr11:49974428 nonsynonymous SNV 0.146 0 22 hPsi_associated_SNPs_30012 0 0 0 0 0 unknown 0.438716916140769 0.438717007049852 0.66180348 0 hPsi_site_23736 iPseU_CNN:0.66180348;iRNA_PseU:0 23737 chr15 27114413 27114413 1 + C A UCEC 27114412 + 27114392 27114432 41 GGGAATGGACAATGGAATGTTCTCTGGTTTTATCATGATCA GGGAATGGACAATGGAATGTTATCTGGTTTTATCATGATCA < 41bp 0.462036891785392 0.820386651728276 0.7682201 0.81978726 prediction 0.640773303456551 Functional Gain - GABRA5 ENSG00000186297 CDS Human protein_coding chr15:27114412 chr15:27114413 nonsynonymous SNV 0.996 0 22 hPsi_associated_SNPs_30013 0 0 0 0 2 unknown 0.438882852255014 0.438621275201565 0.10313432 0 hPsi_site_23737 iPseU_CNN:0.10313432;iRNA_PseU:0 23738 chr15 41859622 41859622 1 + G A STAD 41859621 + 41859601 41859641 41 TCCCTGTGCCCCCCTTTACCTGCCTGCTCCGGGACCTGGTG TCCCTGTGCCCCCCTTTACCTACCTGCTCCGGGACCTGGTG < 41bp 0.3901376170016 0.820379524454108 0.25513852 0.6662693 prediction 0.640759048908217 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41859621 chr15:41859622 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_30014 0 0 1 0 1 Ribosome 0.438718593012022 0.438718592995103 0.3325386 0 hPsi_site_23738 iPseU_CNN:0.3325386;iRNA_PseU:0 23739 chr5 104435327 104435327 1 + G A SKCM 104435326 + 104435306 104435346 41 TTTAAGTAAAGATTTGGAAGTGGATGGACATTTTGGTACCA TTTAAGTAAAGATTTGGAAGTAGATGGACATTTTGGTACCA < 41bp 0.523760676495965 0.844133039085805 0.24520195 0.26567334 prediction 0.64074472517968 Functional Gain - RAB9BP1 ENSG00000232159 ncRNA_exonic Human processed_pseudogene chr5:104435326 chr5:104435327 . . 0 22 hPsi_associated_SNPs_30015 0 0 0 0 0 unknown 0.438718597888611 0.433829839886095 0 0 hPsi_site_23739 iPseU_CNN:0;iRNA_PseU:0 23740 chr1 79002237 79002237 1 + C A UCEC 79002236 + 79002216 79002256 41 AAAGGCTGTCCTTAAGAATCTCTATAAGCTTGCCAGTCAAT AAAGGCTGTCCTTAAGAATCTATATAAGCTTGCCAGTCAAT < 41bp 0.532778934107922 0.853151216867605 0.31953692 0.2994393 prediction 0.640744565519366 Functional Gain - PTGFR ENSG00000122420 CDS Human protein_coding chr1:79002236 chr1:79002237 synonymous SNV . 0 22 hPsi_associated_SNPs_30016 0 0 0 2 0 exosome 0.43874062730039 0.438722494409005 0 0 hPsi_site_23740 iPseU_CNN:0;iRNA_PseU:0 23741 chr14 74531537 74531537 1 + G T READ 74531538 - 74531518 74531558 41 CTTCAGGGGAGACACCAATTTCTATGGCAAACAGGTAACTT CTTCAGGGGAGACACCAATTTATATGGCAAACAGGTAACTT < 41bp 0.456296621523105 0.820367845591539 0.22826669 0.42101845 prediction 0.640735691183077 Functional Gain - ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74531538 chr14:74531537 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_30017 0 0 1 0 2 Endoplasmic reticulum 0.438718592995027 0.438718592994739 0 0 hPsi_site_23741 iPseU_CNN:0;iRNA_PseU:0 23742 chr6 110540993 110540993 1 + G A UVM 110540992 + 110540972 110541012 41 TATGATCGGCATTTGGGAGCTGTCAACACCATTGTTTTTGT TATGATCGGCATTTGGGAGCTATCAACACCATTGTTTTTGT < 41bp 0.574758679265646 0.89512498121957 0.27973855 0.34225377 prediction 0.640732603907847 Functional Gain - CDC40 ENSG00000168438 CDS Human protein_coding chr6:110540992 chr6:110540993 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_30018 0 0 1 0 2 chromatin 0.438574665231304 0.439620575511373 0 0 hPsi_site_23742 iPseU_CNN:0;iRNA_PseU:0 23743 chr7 151805310 151805310 1 + C A UCEC 151805309 + 151805289 151805329 41 GTTCAACTGGGGACTGCACTTCAAATGGGATCTTGTCCCCC GTTCAACTGGGGACTGCACTTAAAATGGGATCTTGTCCCCC < 41bp 0.463561754580599 0.820363539300856 0.3867979 0.33003968 prediction 0.640727078601712 Functional Gain - GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151805309 chr7:151805310 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_30019 0 0 1 0 0 chromatin 0.438718592995098 0.438718592995102 0 0 hPsi_site_23743 iPseU_CNN:0;iRNA_PseU:0 23744 chr7 142499005 142499005 1 + C A LUAD 142499004 + 142498984 142499024 41 GCAGAACCCCCGCAACCACTTCCGCTGTCAAGTCCAGTTCT GCAGAACCCCCGCAACCACTTACGCTGTCAAGTCCAGTTCT < 41bp 0.532504585895429 0.852866828242793 0.3288036 0.7071523 prediction 0.640724484694727 Functional Gain - PRSS3P2;EPHB6 ENSG00000211772 CDS Human TR_C_gene chr7:142499004 chr7:142499005 unknown . 0 22 hPsi_associated_SNPs_30020 0 0 0 0 0 unknown 0.438723030305047 0.438711305455986 0.4143046 0 hPsi_site_23744 iPseU_CNN:0.4143046;iRNA_PseU:0 23745 chr14 69805465 69805465 1 + C A UCEC 69805464 + 69805444 69805484 41 GAAACGGCACCCCTACAACTTCCCTGAGGGTAATGCCCTCA GAAACGGCACCCCTACAACTTACCTGAGGGTAATGCCCTCA < 41bp 0.562239259475038 0.882594305371528 0.3694703 0.6795299 prediction 0.64071009179298 Functional Gain - GALNT16 ENSG00000100626 CDS Human protein_coding chr14:69805464 chr14:69805465 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_30021 0 0 0 0 2 chromatin 0.438718592934188 0.43871863822246 0.3590598 0 hPsi_site_23745 iPseU_CNN:0.3590598;iRNA_PseU:0 23746 chr19 44501559 44501559 1 + G A UCEC 44501558 + 44501538 44501578 41 ACCCATCCAAATGTGAGGATTGTGGGAGACGCTACAAGAGG ACCCATCCAAATGTGAGGATTATGGGAGACGCTACAAGAGG < 41bp 0.4255177430518 0.820352649078165 0.4956402 0.5584701 prediction 0.640705298156331 Functional Gain - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44501558 chr19:44501559 nonsynonymous SNV 0.276 3 22 hPsi_associated_SNPs_30022 0 0 1 0 0 cytosol 0.439443652304057 0.43962434004139 0.1169402 0 hPsi_site_23746 iPseU_CNN:0.1169402;iRNA_PseU:0 23747 chr1 27589652 27589652 1 + G A LGG 27589651 + 27589631 27589671 41 TCTGTCCCCTAGGAGCGGGGTGCCCTGAGCTTTGAGCGGCG TCTGTCCCCTAGGAGCGGGGTACCCTGAGCTTTGAGCGGCG < 41bp 0.401073055484219 0.82035094564024 0.15092447 0.56229866 prediction 0.640701891280481 Functional Gain - WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27589651 chr1:27589652 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_30023 0 0 1 0 2 Cytosol 0.438718593253124 0.438718601412981 0.12459732 0 hPsi_site_23747 iPseU_CNN:0.12459732;iRNA_PseU:0 23748 chr2 97035182 97035182 1 + C A GBM 97035181 + 97035161 97035201 41 AGCCTGCCCCCTGTCATGGCTCAGAACCTCTCCATACCTCT AGCCTGCCCCCTGTCATGGCTAAGAACCTCTCCATACCTCT < 41bp 0.451051269992094 0.820350784491502 0.31337 0.43385637 prediction 0.640701568983003 Functional Gain - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97035181 chr2:97035182 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_30024 0 0 1 0 2 Cytosol 0.440764881535273 0.439267482718095 0 0 hPsi_site_23748 iPseU_CNN:0;iRNA_PseU:0 23749 chr2 48018193 48018193 1 + C A COAD 48018192 + 48018172 48018212 41 AAAGGGAAATCAGTCCGTGTTCATGTACAGTTTTTTGATGA AAAGGGAAATCAGTCCGTGTTAATGTACAGTTTTTTGATGA < 41bp 0.547255195194006 0.867604107172139 0.3255685 0.54895824 prediction 0.640697823956266 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48018192 chr2:48018193 nonsynonymous SNV 0.953 4 22 hPsi_associated_SNPs_30025 0 0 1 0 1 Nucleus 0.438723430315535 0.438718601407515 0.0979164800000001 0 hPsi_site_23749 iPseU_CNN:0.0979164800000001;iRNA_PseU:0 23750 chr1 150532792 150532792 1 + G A rs1553959 150532791 + 150532771 150532811 41 CAGCAGGGATGTCCTCCAGGTGACAGAGGGTGGCAAGGTGA CAGCAGGGATGTCCTCCAGGTAACAGAGGGTGGCAAGGTGA < 41bp 0.515983923474669 0.836325038496531 0.18082261 0.6612166 prediction 0.640682230043724 Functional Gain - ADAMTSL4 ENSG00000143382 UTR3 Human protein_coding chr1:150532791 chr1:150532792 . . 0 22 hPsi_associated_SNPs_30026 1 0 1 0 0 Endoplasmic reticulum 0.438612515803802 0.438718592591093 0.3224332 0 hPsi_site_23750 iPseU_CNN:0.3224332;iRNA_PseU:0 23751 chrX 135572510 135572510 1 + C A COAD 135572509 + 135572489 135572529 41 AGCTCTTGCAAGAAATACATTCTCTGCTGTGCTTCTTAGTG AGCTCTTGCAAGAAATACATTATCTGCTGTGCTTCTTAGTG < 41bp 0.461037233706448 0.82033995012886 0.3710512 0.34085324 prediction 0.64067990025772 Functional Gain - BRS3 ENSG00000102239 CDS Human protein_coding chrX:135572509 chrX:135572510 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_30027 0 0 0 0 0 unknown 0.434423210099937 0.440621237985689 0 0 hPsi_site_23751 iPseU_CNN:0;iRNA_PseU:0 23752 chr11 69063187 69063187 1 + G A LUSC 69063186 + 69063166 69063206 41 CCAGGCCCTGCGTGTTGCGGTGAGAGGAGCATTTGTGTCTC CCAGGCCCTGCGTGTTGCGGTAAGAGGAGCATTTGTGTCTC < 41bp 0.417083255285882 0.820332401746888 0.23049659 0.59059364 prediction 0.640664803493776 Functional Gain - MYEOV ENSG00000172927 CDS Human protein_coding chr11:69063186 chr11:69063187 synonymous SNV . 0 22 hPsi_associated_SNPs_30028 0 0 1 0 0 Ribosome 0.438673476335429 0.438718593345225 0.18118728 0 hPsi_site_23752 iPseU_CNN:0.18118728;iRNA_PseU:0 23753 chr9 71835842 71835842 1 + C A rs41305539 71835841 + 71835821 71835861 41 AAGGTCCAGGTGGCCGCACTTCAGGCCAGCCCTCCCCTGGA AAGGTCCAGGTGGCCGCACTTAAGGCCAGCCCTCCCCTGGA < 41bp 0.452500106580831 0.820330672321243 0.38030732 0.49771512 prediction 0.640661344642486 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71835841 chr9:71835842 nonsynonymous SNV 0.021 0 22 hPsi_associated_SNPs_30029 2 0 1 0 1 Nucleus 0.438626889804044 0.438717692137275 0 0 hPsi_site_23753 iPseU_CNN:0;iRNA_PseU:0 23754 chr21 46047728 46047728 1 + G A rs78393062 46047727 + 46047707 46047747 41 TCTTTGTGCTGCCAGCAGTCTGGCTGCCAGCCGGCTTGCTG TCTTTGTGCTGCCAGCAGTCTAGCTGCCAGCCGGCTTGCTG < 41bp 0.428310584866619 0.820330613960944 0.22511283 0.4437085 prediction 0.640661227921889 Functional Gain - KRTAP10-9 ENSG00000221837 CDS Human protein_coding chr21:46047727 chr21:46047728 nonsynonymous SNV 0.188 0 22 hPsi_associated_SNPs_30030 0 0 0 0 0 unknown 0.43895597355069 0.437515579893802 0 0 hPsi_site_23754 iPseU_CNN:0;iRNA_PseU:0 23755 chr8 28186748 28186748 1 + G A UCEC 28186747 + 28186727 28186767 41 TCAGCAGTTGTCAGAGGGACTGTCTCACATGCCAGGAGAAG TCAGCAGTTGTCAGAGGGACTATCTCACATGCCAGGAGAAG < 41bp 0.399502121124274 0.820328480894482 0.46417782 0.66064614 prediction 0.640656961788964 Functional Gain - PNOC ENSG00000168081 CDS Human protein_coding chr8:28186747 chr8:28186748 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_30031 0 0 0 0 2 exosome 0.438735313907686 0.436804488039482 0.32129228 0 hPsi_site_23755 iPseU_CNN:0.32129228;iRNA_PseU:0 23756 chr10 25313365 25313365 1 + G A UCEC 25313364 + 25313344 25313384 41 AAGCAAAGGATAGCTGTGGTTGCATTTTTTCCTGAGAATGG AAGCAAAGGATAGCTGTGGTTACATTTTTTCCTGAGAATGG < 41bp 0.56818472393658 0.888509849026479 0.143033 0.328076 prediction 0.640650250179797 Functional Gain - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25313364 chr10:25313365 nonsynonymous SNV 0.994 1 22 hPsi_associated_SNPs_30032 0 0 1 0 0 Cytosol 0.438718877432025 0.438718637839969 0 0 hPsi_site_23756 iPseU_CNN:0;iRNA_PseU:0 23757 chr15 99926306 99926306 1 + G A BLCA 99926305 + 99926285 99926325 41 AGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTC AGACTTTTGACCTGCTGAGTTAATAAACACTCAAGAACCTC < 41bp 0.419805273527453 0.820322470546635 0.39987355 0.6864358 prediction 0.64064494109327 Functional Gain - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99926305 chr15:99926306 synonymous SNV . 0 22 hPsi_associated_SNPs_30033 0 0 0 1 1 Cytosol 0.438718589745254 0.438718593014699 0.3728716 0 hPsi_site_23757 iPseU_CNN:0.3728716;iRNA_PseU:0 23758 chr5 57913579 57913579 1 + C A LUSC 57913578 + 57913558 57913598 41 ATAGCAGTGTGGGGAAAACATCTTTTCTATTCCGTTATGCA ATAGCAGTGTGGGGAAAACATATTTTCTATTCCGTTATGCA < 41bp 0.467099689961211 0.820321291580915 0.29734105 0.3317474 prediction 0.64064258316183 Functional Gain - RAB3C ENSG00000152932 CDS Human protein_coding chr5:57913578 chr5:57913579 nonsynonymous SNV 1.000 5 22 hPsi_associated_SNPs_30034 0 0 1 0 0 Endoplasmic reticulum 0.438718580679233 0.43871858731038 0 0 hPsi_site_23758 iPseU_CNN:0;iRNA_PseU:0 23759 chr1 12855732 12855732 1 + G A HNSC 12855731 + 12855711 12855751 41 CTGCTGTTCCGCATCAGTCTTGAACCCCTCGGAGCTCTGCT CTGCTGTTCCGCATCAGTCTTAAACCCCTCGGAGCTCTGCT < 41bp 0.415665558622033 0.820319133831169 0.3118702 0.6214212 prediction 0.640638267662339 Functional Gain - PRAMEF1 ENSG00000116721 CDS Human protein_coding chr1:12855731 chr1:12855732 nonsynonymous SNV 0.003 0 22 hPsi_associated_SNPs_30035 0 0 0 0 0 unknown 0.438177597930383 0.438774203952669 0.2428424 0 hPsi_site_23759 iPseU_CNN:0.2428424;iRNA_PseU:0 23760 chr3 127786858 127786858 1 + G A BLCA 127786857 + 127786837 127786877 41 GCTGAAGGAGCAGCAGATGGTGATGAGAGGCCACCGAGAGA GCTGAAGGAGCAGCAGATGGTAATGAGAGGCCACCGAGAGA < 41bp 0.385150783011939 0.820318913056733 0.25189114 0.635932 prediction 0.640637826113466 Functional Gain - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127786857 chr3:127786858 synonymous SNV . 0 22 hPsi_associated_SNPs_30036 0 0 1 0 2 Ribosome 0.43870622210066 0.438846923526224 0.271864 0 hPsi_site_23760 iPseU_CNN:0.271864;iRNA_PseU:0 23761 chr4 26741526 26741526 1 + G A LUAD 26741525 + 26741505 26741545 41 ATACCATGAACCTTCCAAATTGTATCAGATATTCCGTGAGA ATACCATGAACCTTCCAAATTATATCAGATATTCCGTGAGA < 41bp 0.416799248835749 0.82031729706107 0.4044891 0.3705177 prediction 0.64063459412214 Functional Gain - TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26741525 chr4:26741526 synonymous SNV . 0 22 hPsi_associated_SNPs_30037 0 0 1 0 2 Endoplasmic reticulum 0.438718340301526 0.438719173100841 0 0 hPsi_site_23761 iPseU_CNN:0;iRNA_PseU:0 23762 chr7 31146267 31146267 1 + C A LUSC 31146266 + 31146246 31146286 41 GCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAAT GCAGCTCCCAAATCCGCATGTATGGCCTCCCTGCTGACAAT < 41bp 0.549689517732045 0.869996612969361 0.34884268 0.49580872 prediction 0.640614190474632 Functional Gain - ADCYAP1R1 ENSG00000078549 CDS Human protein_coding chr7:31146266 chr7:31146267 nonsynonymous SNV 0.982 4 22 hPsi_associated_SNPs_30038 0 0 0 0 0 exosome 0.438733033208117 0.439102972206772 0 0 hPsi_site_23762 iPseU_CNN:0;iRNA_PseU:0 23763 chr12 57850607 57850607 1 + G A OV 57850606 + 57850586 57850626 41 GACGGATGTGCCAGATATGGTGGTGGAGGCCTGTGGCTGCA GACGGATGTGCCAGATATGGTAGTGGAGGCCTGTGGCTGCA < 41bp 0.583578289514333 0.903880116442426 0.24818283 0.6677826 prediction 0.640603653856186 Functional Gain - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850606 chr12:57850607 synonymous SNV . 0 22 hPsi_associated_SNPs_30039 0 0 1 0 0 Nucleus 0.438717264077134 0.438713597605382 0.3355652 0 hPsi_site_23763 iPseU_CNN:0.3355652;iRNA_PseU:0 23764 chr8 104432637 104432637 1 + G T SARC 104432636 + 104432616 104432656 41 CCGTGATGGAGTCAATTGCTTGGCAAAGCATCCAGAGAAGC CCGTGATGGAGTCAATTGCTTTGCAAAGCATCCAGAGAAGC < 41bp 0.518302631126227 0.838604220062388 0.18434131 0.23650706 prediction 0.640603177872322 Functional Gain - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432636 chr8:104432637 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_30040 0 0 1 0 0 Nucleus 0.438667422477902 0.438602860633611 0 0 hPsi_site_23764 iPseU_CNN:0;iRNA_PseU:0 23765 chr22 45255687 45255687 1 + C A rs201042184 45255686 + 45255666 45255706 41 AGAGCACAACTACGTCGTCCTCCGCTACCTCATGGGCTTCC AGAGCACAACTACGTCGTCCTACGCTACCTCATGGGCTTCC < 41bp 0.449950582170918 0.82029786025642 0.2202689 0.7711446 prediction 0.640595720512841 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45255686 chr22:45255687 synonymous SNV . 0 22 hPsi_associated_SNPs_30041 0 0 1 9 2 unknown 0.438718586493739 0.438724657705672 0.5422892 0 hPsi_site_23765 iPseU_CNN:0.5422892;iRNA_PseU:0 23766 chr17 6026093 6026093 1 + G A rs146535624 6026092 + 6026072 6026112 41 TGCTGCCAGGTACCCAGAGATGTCATCTCTCTCCAGGTAGA TGCTGCCAGGTACCCAGAGATATCATCTCTCTCCAGGTAGA < 41bp 0.455027233470259 0.82029585209715 0.3429542 0.49885783 prediction 0.6405917041943 Functional Gain - WSCD1 ENSG00000179314 UTR3 Human protein_coding chr17:6026092 chr17:6026093 . . 0 22 hPsi_associated_SNPs_30042 0 0 1 0 0 exosome 0.438719471571261 0.438622345590755 0 0 hPsi_site_23766 iPseU_CNN:0;iRNA_PseU:0 23767 chr3 179051184 179051184 1 + G A rs182333632 179051183 + 179051163 179051203 41 TGTTCCAATTGCTGTAGAAGTGCATGCGATTTCTGAGGATT TGTTCCAATTGCTGTAGAAGTACATGCGATTTCTGAGGATT < 41bp 0.446832414310311 0.820290154506213 0.2943259 0.40436512 prediction 0.640580309012426 Functional Gain - ZNF639 ENSG00000121864 CDS Human protein_coding chr3:179051183 chr3:179051184 synonymous SNV . 0 22 hPsi_associated_SNPs_30043 0 0 1 0 0 Nucleus 0.438789413830109 0.438723903604862 0 0 hPsi_site_23767 iPseU_CNN:0;iRNA_PseU:0 23768 chr16 3406348 3406348 1 + G A SKCM 3406347 + 3406327 3406367 41 CCTCCGCTACACCGCCATCATGAACCCCCAGCTCTGCTGGC CCTCCGCTACACCGCCATCATAAACCCCCAGCTCTGCTGGC < 41bp 0.579613752310254 0.899902564941894 0.21563852 0.2853503 prediction 0.640577625263279 Functional Gain - OR2C1 ENSG00000168158 CDS Human protein_coding chr16:3406347 chr16:3406348 nonsynonymous SNV 0.904 0 22 hPsi_associated_SNPs_30044 0 0 0 0 0 unknown 0.438702863228364 0.438718583842907 0 0 hPsi_site_23768 iPseU_CNN:0;iRNA_PseU:0 23769 chr19 12781580 12781580 1 + G A CESC 12781579 + 12781559 12781599 41 GAGCCAGTGCAGACGCTGGATGAGGCCAGAGATGGCGTGTC GAGCCAGTGCAGACGCTGGATAAGGCCAGAGATGGCGTGTC < 41bp 0.593508463866942 0.913789535453717 0.26783496 0.58158624 prediction 0.64056214317355 Functional Gain - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12781579 chr19:12781580 nonsynonymous SNV 0.757 3 22 hPsi_associated_SNPs_30045 0 0 1 1 1 chromatin 0.438024212971316 0.439340838074683 0.16317248 0 hPsi_site_23769 iPseU_CNN:0.16317248;iRNA_PseU:0 23770 chr4 155718974 155718974 1 + C A UCEC 155718973 + 155718953 155718993 41 TGTCGTTCAGGTTGGGAAGGTCCACCTCCACCTAGAGGCTG TGTCGTTCAGGTTGGGAAGGTACACCTCCACCTAGAGGCTG < 41bp 0.480708550174353 0.820280567693501 0.20397705 0.6857223 prediction 0.640561135387001 Functional Gain - RBM46 ENSG00000151962 CDS Human protein_coding chr4:155718973 chr4:155718974 nonsynonymous SNV 0.999 1 22 hPsi_associated_SNPs_30046 0 0 0 0 1 exosome 0.438718195377851 0.438718507776181 0.3714446 0 hPsi_site_23770 iPseU_CNN:0.3714446;iRNA_PseU:0 23771 chr4 119551965 119551965 1 + C A UCEC 119551964 + 119551944 119551984 41 ACATCTGCCTCATAGCAGATTCTTGAGGCCCAGCATCTGCC ACATCTGCCTCATAGCAGATTATTGAGGCCCAGCATCTGCC < 41bp 0.521177876817526 0.841451051919737 0.3984709 0.40724203 prediction 0.640546350204423 Functional Gain - LOC729218 ENSG00000260404 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:119551964 chr4:119551965 . . 0 22 hPsi_associated_SNPs_30047 0 0 0 0 0 unknown 0.439977346280249 0.438718114285715 0 0 hPsi_site_23771 iPseU_CNN:0;iRNA_PseU:0 23772 chr2 220099597 220099597 1 + G A SKCM 220099596 + 220099576 220099616 41 TCAGGTAGAGTTGGAGCTAGTGGAGTTGACTGTGGGGACTC TCAGGTAGAGTTGGAGCTAGTAGAGTTGACTGTGGGGACTC < 41bp 0.572872625968181 0.893144887105898 0.22021973 0.30173624 prediction 0.640544522275434 Functional Gain - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220099596 chr2:220099597 synonymous SNV . 0 22 hPsi_associated_SNPs_30048 0 0 1 0 1 chromatin 0.438718604869792 0.43871859275751 0 0 hPsi_site_23772 iPseU_CNN:0;iRNA_PseU:0 23773 chr8 57358431 57358431 1 + G A LUAD 57358430 + 57358410 57358450 41 AGCTGCACGTCGCGCAATCCTGGCTGCATTCGGCCCGCACG AGCTGCACGTCGCGCAATCCTAGCTGCATTCGGCCCGCACG < 41bp 0.566196939528508 0.886464409633784 0.16786912 0.29906544 prediction 0.640534940210551 Functional Gain - PENK ENSG00000181195 CDS Human protein_coding chr8:57358430 chr8:57358431 stopgain 0.983 1 22 hPsi_associated_SNPs_30049 0 0 0 0 0 exosome 0.438718983362101 0.438718562461796 0 0 hPsi_site_23773 iPseU_CNN:0;iRNA_PseU:0 23774 chr1 15545853 15545853 1 + G T ESCA 15545852 + 15545832 15545872 41 GAAGAGGAGGATGAGGAGGCTGCCTCAAGGTACTATGTTCC GAAGAGGAGGATGAGGAGGCTTCCTCAAGGTACTATGTTCC < 41bp 0.496507544686599 0.820255256560534 0.4258973 0.521347 prediction 0.640510513121067 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15545852 chr1:15545853 nonsynonymous SNV 0.768 0 22 hPsi_associated_SNPs_30050 0 0 1 0 2 cytosol 0.438741090568544 0.4389075951285 0.042694 0 hPsi_site_23774 iPseU_CNN:0.042694;iRNA_PseU:0 23775 chr11 47594902 47594902 1 + G A SARC 47594901 + 47594881 47594921 41 CTCCCCCCCTAGTAAGTAGATGATCCCGTTGAGGTTGGCAC CTCCCCCCCTAGTAAGTAGATAATCCCGTTGAGGTTGGCAC < 41bp 0.525879902428567 0.846134844835448 0.2547924 0.35422084 prediction 0.640509884813762 Functional Gain - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594901 chr11:47594902 synonymous SNV . 0 22 hPsi_associated_SNPs_30051 0 0 1 0 0 nucleus 0.438718593015538 0.438718619869624 0 0 hPsi_site_23775 iPseU_CNN:0;iRNA_PseU:0 23776 chr22 29837910 29837910 1 + G A SKCM 29837909 + 29837889 29837929 41 AGTGGGGATTTTTCTGGATATGGGCATGCAGAACGTTTCCT AGTGGGGATTTTTCTGGATATAGGCATGCAGAACGTTTCCT < 41bp 0.414687896295881 0.820249822562291 0.16719517 0.32090348 prediction 0.640499645124582 Functional Gain - RFPL1 ENSG00000128250 CDS Human protein_coding chr22:29837909 chr22:29837910 nonsynonymous SNV 0.470 0 22 hPsi_associated_SNPs_30052 0 0 0 0 0 exosome 0.438718599481749 0.438718588633382 0 0 hPsi_site_23776 iPseU_CNN:0;iRNA_PseU:0 23777 chr20 39742739 39742739 1 + G T UCEC 39742738 + 39742718 39742758 41 CAGGAATATGTGGTAGAGTTTGACTTCCTCGGGAAGGACTC CAGGAATATGTGGTAGAGTTTTACTTCCTCGGGAAGGACTC < 41bp 0.515036078724402 0.835283394759059 0.5309951 0.6824304 prediction 0.640494632069313 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39742738 chr20:39742739 nonsynonymous SNV 0.999 4 22 hPsi_associated_SNPs_30053 0 0 1 0 1 Nucleus 0.43871859135963 0.438718594336456 0.3028706 0 hPsi_site_23777 iPseU_CNN:0.3028706;iRNA_PseU:0 23778 chr17 38233799 38233799 1 + G T BLCA 38233798 + 38233778 38233818 41 CTGGACAAAGACGAGCAGTGTGTCGTGTGTGGGGACAAGGC CTGGACAAAGACGAGCAGTGTTTCGTGTGTGGGGACAAGGC < 41bp 0.483949646607653 0.820239370134078 0.61734545 0.7692702 prediction 0.640478740268156 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38233798 chr17:38233799 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_30054 0 0 1 0 1 Ribosome 0.43859903520591 0.438718594866039 0.3038495 0 hPsi_site_23778 iPseU_CNN:0.3038495;iRNA_PseU:0 23779 chr2 30569937 30569937 1 + G A rs538753471 30569936 + 30569916 30569956 41 AGCGGTGACGCCGCCTGGCTTGAGCTAAGTGCTGGGCTCCA AGCGGTGACGCCGCCTGGCTTAAGCTAAGTGCTGGGCTCCA < 41bp 0.460387448532187 0.820238729767811 0.36170518 0.7008103 prediction 0.640477459535622 Functional Gain - LOC285043 ENSG00000235997 ncRNA_exonic Human lincRNA chr2:30569936 chr2:30569937 . . 0 22 hPsi_associated_SNPs_30055 0 0 0 0 0 unknown 0.438717837298471 0.438717230949181 0.4016206 0 hPsi_site_23779 iPseU_CNN:0.4016206;iRNA_PseU:0 23780 chr3 9960273 9960273 1 + G A rs112627391 9960272 + 9960252 9960292 41 GTGCAAGTGCCTGCTGCCCTTGTGCAGTTTGGTCAGTCTGT GTGCAAGTGCCTGCTGCCCTTATGCAGTTTGGTCAGTCTGT < 41bp 0.426355591403012 0.820236099829666 0.20053938 0.22247002 prediction 0.640472199659333 Functional Gain - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9960272 chr3:9960273 nonsynonymous SNV 0.981 0 22 hPsi_associated_SNPs_30056 0 0 1 0 3 Ribosome 0.43770348460388 0.438257542531213 0 0 hPsi_site_23780 iPseU_CNN:0;iRNA_PseU:0 23781 chr4 159627828 159627828 1 + G A GBM 159627827 + 159627807 159627847 41 GCCAAGGATTGCACACCTATTGAGTATCCAAAACCCGATGG GCCAAGGATTGCACACCTATTAAGTATCCAAAACCCGATGG < 41bp 0.40668922190999 0.820235532276177 0.2573225 0.355812 prediction 0.640471064552353 Functional Gain - ETFDH ENSG00000171503 CDS Human protein_coding chr4:159627827 chr4:159627828 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_30057 0 0 1 0 1 Ribosome 0.438717850893315 0.43872001607691 0 0 hPsi_site_23781 iPseU_CNN:0;iRNA_PseU:0 23782 chr7 73731947 73731947 1 + C A COAD 73731946 + 73731926 73731966 41 CCAGCCCCATGGGCCGGACATCTACTGGGTCAGCTTCATCC CCAGCCCCATGGGCCGGACATATACTGGGTCAGCTTCATCC < 41bp 0.455483938572856 0.820229429467297 0.36161554 0.5027586 prediction 0.640458858934593 Functional Gain - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73731946 chr7:73731947 nonsynonymous SNV 0.010 3 22 hPsi_associated_SNPs_30058 0 0 1 0 1 Ribosome 0.438711495157004 0.439053741973102 0.00551720000000011 0 hPsi_site_23782 iPseU_CNN:0.00551720000000011;iRNA_PseU:0 23783 chr22 21363710 21363710 1 + G A UCEC 21363709 + 21363689 21363729 41 GCCCCCAAAGCTGTGGAAGATGAGGAAGCCCTGCAGTCCCA GCCCCCAAAGCTGTGGAAGATAAGGAAGCCCTGCAGTCCCA < 41bp 0.564053321278607 0.884279522273246 0.24203655 0.28990504 prediction 0.640452401989278 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363709 chr22:21363710 . . 0 22 hPsi_associated_SNPs_30059 0 0 0 0 0 unknown 0.438718592995342 0.438718547233133 0 0 hPsi_site_23783 iPseU_CNN:0;iRNA_PseU:0 23784 chr19 36360487 36360487 1 + C A UCEC 36360486 + 36360466 36360506 41 GAGGGGGCTGGTGCTGGGGGTCTCGGTCCTAGGGAGCAAAG GAGGGGGCTGGTGCTGGGGGTATCGGTCCTAGGGAGCAAAG < 41bp 0.462352139774314 0.820223164888079 0.2411873 0.68268085 prediction 0.640446329776158 Functional Gain - APLP1 ENSG00000105290 CDS Human protein_coding chr19:36360486 chr19:36360487 synonymous SNV . 0 22 hPsi_associated_SNPs_30060 0 0 0 0 0 Endoplasmic reticulum 0.438718592989016 0.438718613773121 0.3653617 0 hPsi_site_23784 iPseU_CNN:0.3653617;iRNA_PseU:0 23785 chr20 32664524 32664524 1 + G A UCEC 32664523 + 32664503 32664543 41 CCCAGTAAAGAGCAGTGAGCTGCAGGCCATCAAGACGGAGC CCCAGTAAAGAGCAGTGAGCTACAGGCCATCAAGACGGAGC < 41bp 0.389755808612892 0.820222667708994 0.22882017 0.6444428 prediction 0.640445335417988 Functional Gain - RALY ENSG00000125970 CDS Human protein_coding chr20:32664523 chr20:32664524 synonymous SNV . 0 22 hPsi_associated_SNPs_30061 0 0 1 0 2 Cytosol 0.438727725786944 0.438719014244218 0.2888856 0 hPsi_site_23785 iPseU_CNN:0.2888856;iRNA_PseU:0 23786 chr1 7848195 7848195 1 + G A LUAD 7848194 + 7848174 7848214 41 ATCCTGAATCGTAAGAAAGATGTCCTGGCGTCTTCTCACTT ATCCTGAATCGTAAGAAAGATATCCTGGCGTCTTCTCACTT < 41bp 0.458488897873237 0.820222172720596 0.23446974 0.2753411 prediction 0.640444345441193 Functional Gain - PER3 ENSG00000049246 CDS Human protein_coding chr1:7848194 chr1:7848195 nonsynonymous SNV 0.456 0 22 hPsi_associated_SNPs_30062 0 0 0 0 1 chromatin 0.442743835373651 0.439162818228787 0 0 hPsi_site_23786 iPseU_CNN:0;iRNA_PseU:0 23787 chr1 150957101 150957101 1 + G A CESC 150957100 + 150957080 150957120 41 GACGTGGCCATTGAAATTCTTGCCACTCGAACCCCACCCCA GACGTGGCCATTGAAATTCTTACCACTCGAACCCCACCCCA < 41bp 0.593488515149574 0.913704021265421 0.2533327 0.5858297 prediction 0.640431012231694 Functional Gain - ANXA9 ENSG00000143412 CDS Human protein_coding chr1:150957100 chr1:150957101 nonsynonymous SNV 0.973 1 22 hPsi_associated_SNPs_30063 0 0 0 0 2 cytosol 0.438718608941891 0.438721778375867 0.1716594 0 hPsi_site_23787 iPseU_CNN:0.1716594;iRNA_PseU:0 23788 chr12 133281247 133281247 1 + G A COAD 133281246 + 133281226 133281266 41 CTGGCAGCTCTGTTCTGGTATGCCTACCTGGCCTCCTTGGG CTGGCAGCTCTGTTCTGGTATACCTACCTGGCCTCCTTGGG < 41bp 0.589602467109776 0.909811252977286 0.39654428 0.45691594 prediction 0.640417571735019 Functional Gain - PXMP2 ENSG00000176894;ENSG00000256632 CDS Human other chr12:133281246 chr12:133281247 nonsynonymous SNV 0.953 1 22 hPsi_associated_SNPs_30064 0 0 1 0 1 Ribosome 0.438718592997375 0.438718592989627 0 0 hPsi_site_23788 iPseU_CNN:0;iRNA_PseU:0 23789 chr3 143691324 143691324 1 + G A UCEC 143691323 + 143691303 143691343 41 ACTGACCGACCGGCGCTTCCTGCAGCTCAATAAGTGCCCGG ACTGACCGACCGGCGCTTCCTACAGCTCAATAAGTGCCCGG < 41bp 0.413516483018113 0.820207400960571 0.67199194 0.87549186 prediction 0.640414801921143 Functional Gain - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691323 chr3:143691324 synonymous SNV . 0 22 hPsi_associated_SNPs_30065 0 0 1 0 0 Ribosome 0.438716185864094 0.43871861039778 0.40699984 0 hPsi_site_23789 iPseU_CNN:0.40699984;iRNA_PseU:0 23790 chr17 20446930 20446930 1 + G A SARC 20446929 + 20446909 20446949 41 GCCAAAAGGCCAGACCTGGATGTCTTCATGAGGCGCTCTAG GCCAAAAGGCCAGACCTGGATATCTTCATGAGGCGCTCTAG < 41bp 0.533801298765793 0.854003192393784 0.2475465 0.3855149 prediction 0.640403787255983 Functional Gain - KRT16P3;CDRT15L2 ENSG00000235203 ncRNA_exonic Human unprocessed_pseudogene chr17:20446929 chr17:20446930 . . 0 22 hPsi_associated_SNPs_30066 0 0 0 0 0 unknown 0.438718585020287 0.438718577327431 0 0 hPsi_site_23790 iPseU_CNN:0;iRNA_PseU:0 23791 chr15 74900648 74900648 1 + C A rs192145245 74900647 + 74900627 74900667 41 CAGCCGGTGCCAGCGTGCCTTCCAATATTCAGCCATCTCCT CAGCCGGTGCCAGCGTGCCTTACAATATTCAGCCATCTCCT < 41bp 0.499990001554337 0.820201196131097 0.49841502 0.6188315 prediction 0.640402392262194 Functional Gain - CLK3 ENSG00000179335 upstream Human protein_coding chr15:74900647 chr15:74900648 . . 0 22 hPsi_associated_SNPs_30067 0 0 0 0 1 Nucleus 0.438734939047283 0.438710696553649 0.237663 0 hPsi_site_23791 iPseU_CNN:0.237663;iRNA_PseU:0 23792 chr17 66131148 66131148 1 + G A UCEC 66131147 + 66131127 66131167 41 TGTCGGTCTCCAGGAGGTTGTGCATGCTGGTTTCTGCCACC TGTCGGTCTCCAGGAGGTTGTACATGCTGGTTTCTGCCACC < 41bp 0.551546877829717 0.871745970971977 0.3085159 0.42834836 prediction 0.64039818628452 Functional Gain - LINC00674 ENSG00000267352 ncRNA_exonic Human processed_pseudogene chr17:66131147 chr17:66131148 . . 0 22 hPsi_associated_SNPs_30068 0 0 0 0 0 unknown 0.425431815929934 0.438077776589757 0 0 hPsi_site_23792 iPseU_CNN:0;iRNA_PseU:0 23793 chr17 45909502 45909502 1 + G A PAAD 45909501 + 45909481 45909521 41 GTCCAGAGGAAGGGGGCGTCTGCATCACTGAAGCCCTTATC GTCCAGAGGAAGGGGGCGTCTACATCACTGAAGCCCTTATC < 41bp 0.401101365059363 0.820197730031967 0.2657739 0.340147 prediction 0.640395460063934 Functional Gain - LRRC46 ENSG00000141294 CDS Human protein_coding chr17:45909501 chr17:45909502 nonsynonymous SNV 0.565 0 22 hPsi_associated_SNPs_30069 0 0 0 0 2 exosome 0.438717616776709 0.438720189840602 0 0 hPsi_site_23793 iPseU_CNN:0;iRNA_PseU:0 23794 chr2 113953859 113953859 1 + G A STAD 113953858 + 113953838 113953878 41 GGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCA GGGCATCCTGGCTCGGAAAATACATCAAGATGCAGACGGCA < 41bp 0.397921503712145 0.820189570517908 0.35961896 0.5088744 prediction 0.640379141035815 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113953858 chr2:113953859 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_30070 0 0 1 0 0 chromatin 0.438718593078279 0.438718596936146 0.0177487999999999 0 hPsi_site_23794 iPseU_CNN:0.0177487999999999;iRNA_PseU:0 23795 chr11 66030323 66030323 1 + G A SKCM 66030322 + 66030302 66030342 41 GGGGATGTGTCTGGTCAGCATGGGGGCTACGAGATCCCGGC GGGGATGTGTCTGGTCAGCATAGGGGCTACGAGATCCCGGC < 41bp 0.403464936928331 0.820186205840945 0.2863909 0.46475297 prediction 0.640372411681889 Functional Gain - KLC2 ENSG00000174996 CDS Human protein_coding chr11:66030322 chr11:66030323 nonsynonymous SNV 0.994 4 22 hPsi_associated_SNPs_30071 0 0 1 0 1 Ribosome 0.438718586101213 0.438718575910228 0 0 hPsi_site_23795 iPseU_CNN:0;iRNA_PseU:0 23796 chr2 99999328 99999328 1 + G A LUAD 99999327 + 99999307 99999347 41 GGTTTGGAGCCCCAGACAATTGAGTCTATCAACCTTCTCAA GGTTTGGAGCCCCAGACAATTAAGTCTATCAACCTTCTCAA < 41bp 0.57488411298756 0.895068404751001 0.23819393 0.29162344 prediction 0.640368583526882 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99999327 chr2:99999328 nonsynonymous SNV 0.997 3 22 hPsi_associated_SNPs_30072 0 0 1 0 2 Ribosome 0.438830592567524 0.438822739204151 0 0 hPsi_site_23796 iPseU_CNN:0;iRNA_PseU:0 23797 chr16 57732903 57732903 1 + C A ACC 57732902 + 57732882 57732922 41 GTGCCCGGACCGCGTGCCCCTCTTCCTGCACCCCCTGAACG GTGCCCGGACCGCGTGCCCCTATTCCTGCACCCCCTGAACG < 41bp 0.429482933722082 0.820182854854414 0.32413134 0.49478695 prediction 0.640365709708828 Functional Gain - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57732902 chr16:57732903 synonymous SNV . 0 22 hPsi_associated_SNPs_30073 0 0 0 0 1 cytosol 0.439959007392972 0.438721732486088 0 0 hPsi_site_23797 iPseU_CNN:0;iRNA_PseU:0 23798 chr3 113507630 113507630 1 + C A COAD 113507629 + 113507609 113507649 41 AAGACAGTGATATCACAGTCTCTATCCAAGTATTCTAACAG AAGACAGTGATATCACAGTCTATATCCAAGTATTCTAACAG < 41bp 0.460493357756657 0.82018284455949 0.2855869 0.27624568 prediction 0.640365689118979 Functional Gain - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113507629 chr3:113507630 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_30074 0 0 1 0 2 Ribosome 0.438581586386707 0.438714410453294 0 0 hPsi_site_23798 iPseU_CNN:0;iRNA_PseU:0 23799 chr11 4510814 4510814 1 + C A BLCA 4510813 + 4510793 4510833 41 CTTCATCCTTCAGGCAGTTCTCCAGCTTGCCTCTCAGGAGG CTTCATCCTTCAGGCAGTTCTACAGCTTGCCTCTCAGGAGG < 41bp 0.473539971178514 0.820181551356131 0.23063073 0.5041972 prediction 0.640363102712261 Functional Gain - OR52K1 ENSG00000196778 CDS Human protein_coding chr11:4510813 chr11:4510814 synonymous SNV . 0 22 hPsi_associated_SNPs_30075 0 0 0 0 0 exosome 0.438718553054874 0.438716417324042 0.00839440000000002 0 hPsi_site_23799 iPseU_CNN:0.00839440000000002;iRNA_PseU:0 23800 chr7 5925716 5925716 1 + C A UCEC 5925715 + 5925695 5925735 41 AATTCCAGGAAATGGTGCATTCTTAAAAGCCCCAGTCTCTG AATTCCAGGAAATGGTGCATTATTAAAAGCCCCAGTCTCTG < 41bp 0.527850572985844 0.848029890403311 0.5562372 0.47953936 prediction 0.640358634834933 Functional Gain - OCM ENSG00000122543 CDS Human protein_coding chr7:5925715 chr7:5925716 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_30076 0 0 0 0 1 exosome 0.438698971388534 0.438718439934327 0 0 hPsi_site_23800 iPseU_CNN:0;iRNA_PseU:0 23801 chr10 12162812 12162812 1 + G T READ 12162811 + 12162791 12162831 41 TCTGGTGGGCCGGCCCCCTTTGCCAGTACCCGCTGTAGGAA TCTGGTGGGCCGGCCCCCTTTTCCAGTACCCGCTGTAGGAA < 41bp 0.513294983370747 0.8334701185643 0.2720921 0.48273405 prediction 0.640350270387106 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12162811 chr10:12162812 nonsynonymous SNV 0.956 2 22 hPsi_associated_SNPs_30077 0 0 0 0 1 Endoplasmic reticulum 0.438695386901297 0.438718594272385 0 0 hPsi_site_23801 iPseU_CNN:0;iRNA_PseU:0 23802 chr1 99753553 99753553 1 + C A UCEC 99753552 + 99753532 99753572 41 GGCATCATCGGTGGTTAGCCTCTATTTCCTCGAACTCACAG GGCATCATCGGTGGTTAGCCTATATTTCCTCGAACTCACAG < 41bp 0.541616108035933 0.861791078998081 0.33913255 0.5807164 prediction 0.640349941924296 Functional Gain - PLPPR4 ENSG00000117600 CDS Human protein_coding chr1:99753552 chr1:99753553 synonymous SNV . 0 22 hPsi_associated_SNPs_30078 0 0 0 0 1 exosome 0.438696641905575 0.438658034692286 0.1614328 0 hPsi_site_23802 iPseU_CNN:0.1614328;iRNA_PseU:0 23803 chr19 2806950 2806950 1 + G A UCEC 2806949 + 2806929 2806969 41 CCTCAAGGAGCTGGTGACGCTGCGGGCCCAGAAGTCCCGCC CCTCAAGGAGCTGGTGACGCTACGGGCCCAGAAGTCCCGCC < 41bp 0.590842024917749 0.911013765909154 0.31074935 0.7023762 prediction 0.640343481982811 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2806949 chr19:2806950 synonymous SNV . 0 22 hPsi_associated_SNPs_30079 0 0 1 0 1 Ribosome 0.438718593124359 0.438718592879172 0.4047524 0 hPsi_site_23803 iPseU_CNN:0.4047524;iRNA_PseU:0 23804 chr3 98002396 98002396 1 + C A COAD 98002395 + 98002375 98002415 41 CCATTGTGACAGTTCTTAATTCTTACACATTTGCTCTTTTC CCATTGTGACAGTTCTTAATTATTACACATTTGCTCTTTTC < 41bp 0.503579033882115 0.823750660556865 0.26814657 0.31252784 prediction 0.640343253349499 Functional Gain - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98002395 chr3:98002396 nonsynonymous SNV 0.006 3 22 hPsi_associated_SNPs_30080 0 0 0 0 0 unknown 0.439065707782242 0.438909985541779 0 0 hPsi_site_23804 iPseU_CNN:0;iRNA_PseU:0 23805 chr2 27746184 27746184 1 + G A SKCM 27746183 + 27746163 27746203 41 CTATTCCGGTGCTCGATCACTGAGGCTCAGGCACACCTGGC CTATTCCGGTGCTCGATCACTAAGGCTCAGGCACACCTGGC < 41bp 0.407565440954942 0.820171090729152 0.2085559 0.38666105 prediction 0.640342181458304 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27746183 chr2:27746184 nonsynonymous SNV 0.949 0 22 hPsi_associated_SNPs_30081 0 0 0 0 1 cytosol 0.438732796226751 0.438725403565772 0 0 hPsi_site_23805 iPseU_CNN:0;iRNA_PseU:0 23806 chr2 29073236 29073236 1 + G T UCEC 29073237 - 29073217 29073257 41 GATTTTCCATATGGATCATTTCCCTATGTTGCTAGACCAGT GATTTTCCATATGGATCATTTACCTATGTTGCTAGACCAGT < 41bp 0.544145402653907 0.864316304122271 0.16113031 0.20810321 prediction 0.640341802936728 Functional Gain - TRMT61B ENSG00000171103 CDS Human protein_coding chr2:29073237 chr2:29073236 nonsynonymous SNV 0.734 4 22 hPsi_associated_SNPs_30082 0 0 1 0 2 Ribosome 0.438718736321715 0.43871040566534 0 0 hPsi_site_23806 iPseU_CNN:0;iRNA_PseU:0 23807 chr3 98001848 98001848 1 + C A COAD 98001847 + 98001827 98001867 41 GTTCTTGGTGTTCTTGGTGATCTATCTCATCACTATTGTGT GTTCTTGGTGTTCTTGGTGATATATCTCATCACTATTGTGT < 41bp 0.511837148743592 0.83200199634692 0.27452976 0.53793687 prediction 0.640329695206656 Functional Gain - OR5H2 ENSG00000197938 CDS Human protein_coding chr3:98001847 chr3:98001848 synonymous SNV . 0 22 hPsi_associated_SNPs_30083 0 0 0 0 0 unknown 0.439088289031581 0.438918805748895 0.07587374 0 hPsi_site_23807 iPseU_CNN:0.07587374;iRNA_PseU:0 23808 chr7 143018849 143018849 1 + G T LUAD 143018848 + 143018828 143018868 41 AAGACAATACTTCGTGGGGTTGTCCTGAAGGAATACCTCAC AAGACAATACTTCGTGGGGTTTTCCTGAAGGAATACCTCAC < 41bp 0.496289979202031 0.820161658650775 0.23323679 0.28111273 prediction 0.640323317301549 Functional Gain - CLCN1 ENSG00000188037 CDS Human protein_coding chr7:143018848 chr7:143018849 nonsynonymous SNV 0.997 4 22 hPsi_associated_SNPs_30084 0 0 0 2 2 exosome 0.438757053589793 0.438718592995347 0 0 hPsi_site_23808 iPseU_CNN:0;iRNA_PseU:0 23809 chr16 332780 332780 1 + G A SKCM 332779 + 332759 332799 41 CGCACCACCTGTCCTGGGAGTGGGGTCTCTGCATCTGCCAG CGCACCACCTGTCCTGGGAGTAGGGTCTCTGCATCTGCCAG < 41bp 0.484658703887731 0.820159766995712 0.32886076 0.39443016 prediction 0.640319533991423 Functional Gain - ARHGDIG ENSG00000242173 CDS Human protein_coding chr16:332779 chr16:332780 stopgain 0.969 0 22 hPsi_associated_SNPs_30085 0 0 1 0 0 exosome 0.438718628327696 0.438718592963016 0 0 hPsi_site_23809 iPseU_CNN:0;iRNA_PseU:0 23810 chr20 61341156 61341156 1 + G A rs144370300 61341155 + 61341135 61341175 41 CTGGCTCGCCTCGGCCCTGCTGGCGGTGCCTATGCTGTTCA CTGGCTCGCCTCGGCCCTGCTAGCGGTGCCTATGCTGTTCA < 41bp 0.41504746995704 0.820158736019846 0.28701425 0.6388395 prediction 0.640317472039692 Functional Gain - NTSR1 ENSG00000101188 CDS Human protein_coding chr20:61341155 chr20:61341156 synonymous SNV . 0 22 hPsi_associated_SNPs_30086 0 0 0 0 0 exosome 0.438720085456549 0.438714575261874 0.277679 0 hPsi_site_23810 iPseU_CNN:0.277679;iRNA_PseU:0 23811 chr2 121728054 121728054 1 + G A SKCM 121728053 + 121728033 121728073 41 AGGGGTCTGGGGTCAGCCTTTGGACACACACCACCCCTGAT AGGGGTCTGGGGTCAGCCTTTAGACACACACCACCCCTGAT < 41bp 0.580178256574186 0.900336584498237 0.34674627 0.67180735 prediction 0.640316655848102 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121728053 chr2:121728054 stopgain 0.999 4 22 hPsi_associated_SNPs_30087 0 0 1 0 1 Endoplasmic reticulum 0.438718582602278 0.438717506165505 0.3436147 0 hPsi_site_23811 iPseU_CNN:0.3436147;iRNA_PseU:0 23812 chr21 46066611 46066611 1 + G A UCEC 46066610 + 46066590 46066630 41 CCAGCTCCTGCACGCCGTCATGCTGCCAGCAGTCTAGCTGC CCAGCTCCTGCACGCCGTCATACTGCCAGCAGTCTAGCTGC < 41bp 0.568610201422658 0.888766534189978 0.24301568 0.31331968 prediction 0.64031266553464 Functional Gain - KRTAP10-11 ENSG00000243489 CDS Human protein_coding chr21:46066610 chr21:46066611 nonsynonymous SNV 0.852 3 22 hPsi_associated_SNPs_30088 0 0 0 0 0 unknown 0.438721525516427 0.438719333588404 0 0 hPsi_site_23812 iPseU_CNN:0;iRNA_PseU:0 23813 chr12 50149438 50149438 1 + G A SKCM 50149437 + 50149417 50149457 41 GGCTGGCCTGCTGTCTGCCTTGGGCTCCCTGATATTGATGA GGCTGGCCTGCTGTCTGCCTTAGGCTCCCTGATATTGATGA < 41bp 0.582815391870858 0.902969374436741 0.35133272 0.6550862 prediction 0.640307965131767 Functional Gain - TMBIM6 ENSG00000139644 CDS Human protein_coding chr12:50149437 chr12:50149438 synonymous SNV . 0 22 hPsi_associated_SNPs_30089 0 0 1 0 1 Ribosome 0.438718593016199 0.438741193242961 0.3101724 0 hPsi_site_23813 iPseU_CNN:0.3101724;iRNA_PseU:0 23814 chrX 153667428 153667428 1 + C A UCEC 153667427 + 153667407 153667447 41 GGTGGTGGAGGGCAGCTTTGTCTACAAGGGGGGCAAGATCT GGTGGTGGAGGGCAGCTTTGTATACAAGGGGGGCAAGATCT < 41bp 0.442345381126244 0.820152093978431 0.2974123 0.50745964 prediction 0.640304187956862 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153667427 chrX:153667428 synonymous SNV . 0 22 hPsi_associated_SNPs_30090 0 0 1 0 2 Cytosol 0.438718567799324 0.438718592793961 0.01491928 0 hPsi_site_23814 iPseU_CNN:0.01491928;iRNA_PseU:0 23815 chr3 197553820 197553820 1 + C A KIRP 197553819 + 197553799 197553839 41 ACCACAATCCCTGTTTGTTATCGGAACCTCAGGCACCTACA ACCACAATCCCTGTTTGTTATAGGAACCTCAGGCACCTACA < 41bp 0.450604192294557 0.820151046325186 0.23244494 0.27491307 prediction 0.640302092650372 Functional Gain - LRCH3 ENSG00000186001 CDS Human protein_coding chr3:197553819 chr3:197553820 synonymous SNV . 0 22 hPsi_associated_SNPs_30091 0 0 1 0 2 Ribosome 0.438461749391582 0.438712167398818 0 0 hPsi_site_23815 iPseU_CNN:0;iRNA_PseU:0 23816 chr17 32953339 32953339 1 + G T SARC 32953338 + 32953318 32953358 41 GGTGTTCCAGACCAAGGAGCTGCCGGTCCTCAACGTCTCTC GGTGTTCCAGACCAAGGAGCTTCCGGTCCTCAACGTCTCTC < 41bp 0.515068496429546 0.835218791491091 0.29817796 0.39028662 prediction 0.640300590123089 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32953338 chr17:32953339 synonymous SNV . 0 22 hPsi_associated_SNPs_30092 0 0 0 0 0 exosome 0.438749607250382 0.428254533553213 0 0 hPsi_site_23816 iPseU_CNN:0;iRNA_PseU:0 23817 chr11 71821194 71821194 1 + C T STAD 71821195 - 71821175 71821215 41 CTCAGAGGATGATGAGGATATGCAGGACATGGACGAGATGA CTCAGAGGATGATGAGGATATACAGGACATGGACGAGATGA < 41bp 0.584640115150494 0.904790379811908 0.28574312 0.6572939 prediction 0.64030052932283 Functional Gain - ANAPC15 ENSG00000110200 CDS Human protein_coding chr11:71821195 chr11:71821194 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_30093 0 0 1 0 2 Cytosol 0.438219232107891 0.438079501962995 0.3145878 0 hPsi_site_23817 iPseU_CNN:0.3145878;iRNA_PseU:0 23818 chr1 111772476 111772476 1 + G A LUAD 111772475 + 111772455 111772495 41 TTCCACCCATCTATTGCAGGTGTAGTGGTCTTGCTGCTTCT TTCCACCCATCTATTGCAGGTATAGTGGTCTTGCTGCTTCT < 41bp 0.470232392068329 0.82014803927175 0.49455652 0.63520193 prediction 0.640296078543499 Functional Gain - CHI3L2 ENSG00000064886 CDS Human protein_coding chr1:111772475 chr1:111772476 nonsynonymous SNV 0.337 0 22 hPsi_associated_SNPs_30094 0 0 0 0 2 exosome 0.438733344935072 0.438747930951571 0.27040386 0 hPsi_site_23818 iPseU_CNN:0.27040386;iRNA_PseU:0 23819 chr17 4788879 4788879 1 + G A BLCA 4788878 + 4788858 4788898 41 CCAGAGGTCATCGCCTGTGATGAGAACCCTGATGCCACCTA CCAGAGGTCATCGCCTGTGATAAGAACCCTGATGCCACCTA < 41bp 0.424114728665244 0.820145245352756 0.23587355 0.28051776 prediction 0.640290490705512 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4788878 chr17:4788879 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_30095 0 0 1 0 0 Ribosome 0.438720135006626 0.438721918904469 0 0 hPsi_site_23819 iPseU_CNN:0;iRNA_PseU:0 23820 chr17 7837842 7837842 1 + G A LUSC 7837841 + 7837821 7837861 41 GAAGAGGACTCCTTTGACAGTGATAGCACAGCCACCTTGCT GAAGAGGACTCCTTTGACAGTAATAGCACAGCCACCTTGCT < 41bp 0.388695775998426 0.820144802833562 0.3059727 0.32332522 prediction 0.640289605667124 Functional Gain - CNTROB ENSG00000170037 CDS Human protein_coding chr17:7837841 chr17:7837842 nonsynonymous SNV 0.987 1 22 hPsi_associated_SNPs_30096 0 0 1 0 2 Nucleus 0.438719958887025 0.438659890186968 0 0 hPsi_site_23820 iPseU_CNN:0;iRNA_PseU:0 23821 chr9 34241362 34241362 1 + G A STAD 34241361 + 34241341 34241381 41 GACTCACAGTACAGCCACAATGCCACCTCCTATTAACCCCA GACTCACAGTACAGCCACAATACCACCTCCTATTAACCCCA < 41bp 0.402079257428454 0.820143615926938 0.23504072 0.30603072 prediction 0.640287231853876 Functional Gain - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241361 chr9:34241362 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_30097 0 0 1 0 0 Ribosome 0.43871949211359 0.43871901548559 0 0 hPsi_site_23821 iPseU_CNN:0;iRNA_PseU:0 23822 chr9 77286764 77286764 1 + G T COAD 77286763 + 77286743 77286783 41 CTTCAGGAAAAAATTTATTTTGCACTTCAACATGTGATTCA CTTCAGGAAAAAATTTATTTTTCACTTCAACATGTGATTCA < 41bp 0.518514900669733 0.838655447016387 0.31926954 0.32424164 prediction 0.640281092693308 Functional Gain - RORB ENSG00000198963 CDS Human protein_coding chr9:77286763 chr9:77286764 nonsynonymous SNV 1.000 2 22 hPsi_associated_SNPs_30098 0 0 0 0 2 exosome 0.438583844870536 0.438649030812377 0 0 hPsi_site_23822 iPseU_CNN:0;iRNA_PseU:0 23823 chr19 1376723 1376723 1 + G A rs266805 1376722 + 1376702 1376742 41 CGTGGCAGTCCTGATTTCCATGCTTCTGGAGAATCCATTTC CGTGGCAGTCCTGATTTCCATACTTCTGGAGAATCCATTTC < 41bp 0.434670353434214 0.820134668864135 0.33509418 0.38365608 prediction 0.64026933772827 Functional Gain - MUM1 ENSG00000160953 UTR3 Human protein_coding chr19:1376722 chr19:1376723 . . 0 22 hPsi_associated_SNPs_30099 0 0 1 0 0 Cytosol 0.438703175759215 0.438718426785758 0 0 hPsi_site_23823 iPseU_CNN:0;iRNA_PseU:0 23824 chr7 891653 891653 1 + C A UCEC 891652 + 891632 891672 41 ACCAGTTTGTTACTTTGATTTCTTGGCTGAATGTGTTTCTT ACCAGTTTGTTACTTTGATTTATTGGCTGAATGTGTTTCTT < 41bp 0.46443403890452 0.820131625523732 0.5755284 0.84581244 prediction 0.640263251047464 Functional Gain - SUN1 ENSG00000164828 CDS Human protein_coding chr7:891652 chr7:891653 nonsynonymous SNV 1.000 4 22 hPsi_associated_SNPs_30100 0 0 1 0 1 Endoplasmic reticulum 0.438299618900961 0.438779592337505 0.54056808 0 hPsi_site_23824 iPseU_CNN:0.54056808;iRNA_PseU:0 23825 chr7 142637512 142637512 1 + G A HNSC 142637511 + 142637491 142637531 41 GATGTGGCAGGTGGTGGACATGGCCCAGCAGGAAGAAGACC GATGTGGCAGGTGGTGGACATAGCCCAGCAGGAAGAAGACC < 41bp 0.403212766339079 0.820130126659874 0.25674945 0.37619847 prediction 0.640260253319748 Functional Gain - C7orf34 ENSG00000165131 CDS Human protein_coding chr7:142637511 chr7:142637512 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_30101 0 0 0 0 1 exosome 0.438719656702855 0.435961192415233 0 0 hPsi_site_23825 iPseU_CNN:0;iRNA_PseU:0 23826 chr9 130573242 130573242 1 + G T SARC 130573241 + 130573221 130573261 41 TAGCCCTGCCAGTTTGACTATGCCGTCTTCTGCCCTAACCT TAGCCCTGCCAGTTTGACTATTCCGTCTTCTGCCCTAACCT < 41bp 0.519236951049231 0.839366923740711 0.2180427 0.33064345 prediction 0.640259945382958 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130573241 chr9:130573242 nonsynonymous SNV 0.997 2 22 hPsi_associated_SNPs_30102 0 0 0 0 2 Cytosol 0.438724818991757 0.438718592991127 0 0 hPsi_site_23826 iPseU_CNN:0;iRNA_PseU:0 23827 chr16 89261424 89261424 1 + G A COAD 89261423 + 89261403 89261443 41 ACTACGACTACCTCAGAGACTGGGGGCCCCGCTTCGCCCGG ACTACGACTACCTCAGAGACTAGGGGCCCCGCTTCGCCCGG < 41bp 0.413076116919639 0.820129361782298 0.30623147 0.33856428 prediction 0.640258723564596 Functional Gain - CDH15 ENSG00000129910 CDS Human protein_coding chr16:89261423 chr16:89261424 stopgain 0.979 1 22 hPsi_associated_SNPs_30103 0 0 0 0 0 nucleus 0.438718593478219 0.43871860738931 0 0 hPsi_site_23827 iPseU_CNN:0;iRNA_PseU:0 23828 chr12 6422924 6422924 1 + G A OV 6422923 + 6422903 6422943 41 CACGGGGGCCATGTGGGGGCTGGCCTGCTTCACTCCCCCAA CACGGGGGCCATGTGGGGGCTAGCCTGCTTCACTCCCCCAA < 41bp 0.396404777764029 0.820123558760281 0.20139205 0.43799067 prediction 0.640247117520561 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6422923 chr12:6422924 nonsynonymous SNV 0.326 0 22 hPsi_associated_SNPs_30104 0 0 1 0 1 Nucleus 0.438739853996729 0.438718594188193 0 0 hPsi_site_23828 iPseU_CNN:0;iRNA_PseU:0 23829 chrX 48418227 48418227 1 + C A UCEC 48418226 + 48418206 48418246 41 GGGCCTGAGGATGGCCCACATCTACGGGCGCTGCACGACCT GGGCCTGAGGATGGCCCACATATACGGGCGCTGCACGACCT < 41bp 0.548631318093563 0.868752227137059 0.46122622 0.46582326 prediction 0.640241818086992 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48418226 chrX:48418227 nonsynonymous SNV 0.720 1 22 hPsi_associated_SNPs_30105 0 0 0 0 0 nucleolus 0.438714318038114 0.438693061213917 0 0 hPsi_site_23829 iPseU_CNN:0;iRNA_PseU:0 23830 chr19 57932462 57932462 1 + C A UCEC 57932461 + 57932441 57932481 41 GTGTAGTGAATGTGGGAAATTCTTTAGGCACAACTCAAATC GTGTAGTGAATGTGGGAAATTATTTAGGCACAACTCAAATC < 41bp 0.532316204344297 0.852434248029555 0.3682797 0.34256488 prediction 0.640236087370518 Functional Gain - ZNF17 ENSG00000186272 CDS Human protein_coding chr19:57932461 chr19:57932462 nonsynonymous SNV 0.206 0 22 hPsi_associated_SNPs_30106 0 0 1 0 0 nucleus 0.437818066104478 0.438467495662401 0 0 hPsi_site_23830 iPseU_CNN:0;iRNA_PseU:0 23831 chr1 228879217 228879217 1 + C A UCEC 228879216 + 228879196 228879236 41 GTCGGATCTCAGAGAAGATGTCAAAGTCCTCATTGAGTTGG GTCGGATCTCAGAGAAGATGTAAAAGTCCTCATTGAGTTGG < 41bp 0.466384378853147 0.82011434013869 0.19922128 0.4853718 prediction 0.64022868027738 Functional Gain - RHOU ENSG00000116574 CDS Human protein_coding chr1:228879216 chr1:228879217 synonymous SNV . 0 22 hPsi_associated_SNPs_30107 0 0 1 0 0 Ribosome 0.438719393716564 0.438729093454707 0 0 hPsi_site_23831 iPseU_CNN:0;iRNA_PseU:0 23832 chr1 27190105 27190105 1 + G A LUAD 27190104 + 27190084 27190124 41 CTACCGCTACCTGGCCGAGGTGGCCACCGGTGACGACAAGA CTACCGCTACCTGGCCGAGGTAGCCACCGGTGACGACAAGA < 41bp 0.574025308861081 0.894138953832192 0.1281952 0.2794298 prediction 0.640227289942222 Functional Gain - SFN ENSG00000175793 CDS Human protein_coding chr1:27190104 chr1:27190105 synonymous SNV . 0 22 hPsi_associated_SNPs_30108 0 0 0 0 0 Ribosome 0.438736627431702 0.438719854771297 0 0 hPsi_site_23832 iPseU_CNN:0;iRNA_PseU:0 23833 chr9 131331089 131331089 1 + G T READ 131331088 + 131331068 131331108 41 TCAAGCATTTGAAGCTGAAGTGCAGGCCAACTCAGGAGCCA TCAAGCATTTGAAGCTGAAGTTCAGGCCAACTCAGGAGCCA < 41bp 0.499857606372115 0.820110654716192 0.3783374 0.6795805 prediction 0.640221309432384 Functional Gain - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131331088 chr9:131331089 synonymous SNV . 0 22 hPsi_associated_SNPs_30109 0 0 1 0 2 Nucleus 0.436642610010472 0.445430180527583 0.359161 0 hPsi_site_23833 iPseU_CNN:0.359161;iRNA_PseU:0 23834 chr1 163315514 163315514 1 + G T LUAD 163315513 + 163315493 163315533 41 TCTATGGAGACTCAGTTGACTGCCTGCCTTCATGTCAGTTG TCTATGGAGACTCAGTTGACTTCCTGCCTTCATGTCAGTTG < 41bp 0.516979767703321 0.837090005438822 0.28665304 0.3424525 prediction 0.640220475471001 Functional Gain - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163315513 chr1:163315514 nonsynonymous SNV 0.231 0 22 hPsi_associated_SNPs_30110 0 0 1 0 2 Cytosol 0.385746063120373 0.434776695813949 0 0 hPsi_site_23834 iPseU_CNN:0;iRNA_PseU:0 23835 chr16 23690219 23690219 1 + G A rs113553976 23690218 + 23690198 23690238 41 GCGGAGCGGTGCGGAGGCTCTGCTCGGATCGAGGTCTGCAG GCGGAGCGGTGCGGAGGCTCTACTCGGATCGAGGTCTGCAG < 41bp 0.462657435423561 0.820107219108728 0.19136155 0.9518479 prediction 0.640214438217455 Functional Gain - PLK1 ENSG00000166851 UTR5 Human protein_coding chr16:23690218 chr16:23690219 . . 0 22 hPsi_associated_SNPs_30111 0 0 1 0 0 Ribosome 0.438717504609367 0.439011905311528 0.9036958 0 hPsi_site_23835 iPseU_CNN:0.9036958;iRNA_PseU:0 23836 chr14 19378016 19378016 1 + C A HNSC 19378015 + 19377995 19378035 41 CTTTGATCAGTACCTTGCTATCTGCCGTCCCTTGCTCTATC CTTTGATCAGTACCTTGCTATATGCCGTCCCTTGCTCTATC < 41bp 0.543232224610357 0.863336412371576 0.5391613 0.5817412 prediction 0.640208375522437 Functional Gain - OR11H12 ENSG00000257115 CDS Human protein_coding chr14:19378015 chr14:19378016 synonymous SNV . 0 22 hPsi_associated_SNPs_30112 0 0 0 0 0 unknown 0.438718592567443 0.438718594115697 0.0851598 0 hPsi_site_23836 iPseU_CNN:0.0851598;iRNA_PseU:0 23837 chr7 150027963 150027963 1 + C A UCEC 150027962 + 150027942 150027982 41 CTCTGCAGAGCAGCAGCCACTCTGGGGCCTTCCTGCTGGCC CTCTGCAGAGCAGCAGCCACTATGGGGCCTTCCTGCTGGCC < 41bp 0.536912349486795 0.857011577343099 0.3491692 0.6097151 prediction 0.640198455712608 Functional Gain - ZBED6CL ENSG00000188707 CDS Human protein_coding chr7:150027962 chr7:150027963 nonsynonymous SNV 0.002 2 22 hPsi_associated_SNPs_30113 0 0 1 0 0 chromatin 0.438718592968507 0.438718596497777 0.2194302 0 hPsi_site_23837 iPseU_CNN:0.2194302;iRNA_PseU:0 23838 chr17 73520404 73520404 1 + G T OV 73520403 + 73520383 73520423 41 TTGTCTTACCAGAGTGGGGATGTCCCTCTGATCTTTGCCCT TTGTCTTACCAGAGTGGGGATTTCCCTCTGATCTTTGCCCT < 41bp 0.509431662088734 0.829522556299795 0.29714864 0.29430795 prediction 0.640181788422123 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73520403 chr17:73520404 nonsynonymous SNV 0.996 4 22 hPsi_associated_SNPs_30114 0 0 1 0 1 Cytosol 0.438718592995118 0.438718592995102 0 0 hPsi_site_23838 iPseU_CNN:0;iRNA_PseU:0 23839 chr17 8216242 8216242 1 + G T SARC 8216241 + 8216221 8216261 41 GGCTACCTGTCTCCCACAGATGCTGGCCTGGCCTGCCCTCC GGCTACCTGTCTCCCACAGATTCTGGCCTGGCCTGCCCTCC < 41bp 0.496014543884164 0.820090410051301 0.21317828 0.31835866 prediction 0.640180820102601 Functional Gain - ARHGEF15 ENSG00000198844 CDS Human protein_coding chr17:8216241 chr17:8216242 nonsynonymous SNV 0.936 1 22 hPsi_associated_SNPs_30115 0 0 0 0 1 exosome 0.438718915722098 0.43822009181674 0 0 hPsi_site_23839 iPseU_CNN:0;iRNA_PseU:0 23840 chr9 131469234 131469234 1 + G T BLCA 131469233 + 131469213 131469253 41 CACGTTGAGGCAGCTGTGGCTGAGGGCGCCAAGAACGTGGT CACGTTGAGGCAGCTGTGGCTTAGGGCGCCAAGAACGTGGT < 41bp 0.5185039540737 0.838589235720508 0.28891066 0.6785786 prediction 0.640170563293617 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131469233 chr9:131469234 stopgain 0.810 0 22 hPsi_associated_SNPs_30116 0 0 1 0 2 chromatin 0.438600986621643 0.438717769441736 0.3571572 0 hPsi_site_23840 iPseU_CNN:0.3571572;iRNA_PseU:0 23841 chr7 100485895 100485895 1 + G A COAD 100485894 + 100485874 100485914 41 ATAGCTGGTGCTGTCCGCCCTGCAGTCCCCACAGGAGGCCC ATAGCTGGTGCTGTCCGCCCTACAGTCCCCACAGGAGGCCC < 41bp 0.588751773237875 0.908827761113674 0.65679455 0.7902465 prediction 0.640151975751597 Functional Gain - SRRT ENSG00000087087 CDS Human protein_coding chr7:100485894 chr7:100485895 nonsynonymous SNV 0.995 0 22 hPsi_associated_SNPs_30117 0 0 1 0 1 Nucleus 0.438718592995102 0.438718592995102 0.2669039 0 hPsi_site_23841 iPseU_CNN:0.2669039;iRNA_PseU:0 23842 chr14 93397857 93397857 1 + C A UCEC 93397856 + 93397836 93397876 41 CGAGGGGGACAGTGAGGGCCTCTCTCAGGGTCTGGTGGACA CGAGGGGGACAGTGAGGGCCTATCTCAGGGTCTGGTGGACA < 41bp 0.45347325463766 0.820074761063481 0.38856936 0.6044637 prediction 0.640149522126962 Functional Gain - CHGA ENSG00000100604 CDS Human protein_coding chr14:93397856 chr14:93397857 synonymous SNV . 0 22 hPsi_associated_SNPs_30118 0 0 0 0 0 exosome 0.438717378683877 0.438718578544168 0.2089274 0 hPsi_site_23842 iPseU_CNN:0.2089274;iRNA_PseU:0 23843 chr5 180377501 180377501 1 + C A LUSC 180377500 + 180377480 180377520 41 AGACAAGCAACAGTGAGTCCTCCTCACAGGCAACCACGCCC AGACAAGCAACAGTGAGTCCTACTCACAGGCAACCACGCCC < 41bp 0.470928176075775 0.820070059652759 0.1715593 0.6887766 prediction 0.640140119305518 Functional Gain - BTNL8 ENSG00000113303 CDS Human protein_coding chr5:180377500 chr5:180377501 nonsynonymous SNV 0.001 0 22 hPsi_associated_SNPs_30119 0 0 0 0 0 chromatin 0.438718529435095 0.438718554112987 0.3775532 0 hPsi_site_23843 iPseU_CNN:0.3775532;iRNA_PseU:0 23844 chr4 124323001 124323001 1 + G A rs6815848 124323000 + 124322980 124323020 41 TGAAATCATACCAATTAATGTGAATAATAACTACGAGCACA TGAAATCATACCAATTAATGTAAATAATAACTACGAGCACA < 41bp 0.421675741190301 0.820067268806725 0.22101817 0.22890976 prediction 0.640134537613451 Functional Gain - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124323000 chr4:124323001 synonymous SNV . 0 22 hPsi_associated_SNPs_30120 0 0 0 0 0 nucleus 0.438715245077226 0.43862680257352 0 0 hPsi_site_23844 iPseU_CNN:0;iRNA_PseU:0 23845 chr19 36164163 36164163 1 + C A LUAD 36164162 + 36164142 36164182 41 GCTCATGCTCATCGTCTACATCTTCGAGTGCGCCTCCTGCA GCTCATGCTCATCGTCTACATATTCGAGTGCGCCTCCTGCA < 41bp 0.562265837890244 0.882329961337571 0.7686652 0.8201816 prediction 0.640128246894654 Functional Gain - UPK1A ENSG00000105668 CDS Human protein_coding chr19:36164162 chr19:36164163 synonymous SNV . 0 22 hPsi_associated_SNPs_30121 0 0 0 0 2 exosome 0.438674889852154 0.438628327230655 0.1030328 0 hPsi_site_23845 iPseU_CNN:0.1030328;iRNA_PseU:0 23846 chr6 28269009 28269009 1 + G T LUAD 28269008 + 28268988 28269028 41 ACAGTTCAGGAAATGAGGTGTGTGTTTGGTGTCTTACTTTT ACAGTTCAGGAAATGAGGTGTTTGTTTGGTGTCTTACTTTT < 41bp 0.493451400480476 0.820060763586772 0.23717892 0.2657355 prediction 0.640121527173543 Functional Gain - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28269008 chr6:28269009 nonsynonymous SNV 1.000 0 22 hPsi_associated_SNPs_30122 0 0 1 0 0 nucleoplasm 0.438718438418036 0.438718553208431 0 0 hPsi_site_23846 iPseU_CNN:0;iRNA_PseU:0 23847 chr20 238422 238422 1 + G A SKCM 238421 + 238401 238441 41 CCAAGCCACCCCTTCAGCCATGAAGTTCCTGCTCCTGGTCT CCAAGCCACCCCTTCAGCCATAAAGTTCCTGCTCCTGGTCT < 41bp 0.428197608385453 0.820059493506338 0.2568895 0.29706532 prediction 0.640118987012677 Functional Gain - DEFB132 ENSG00000186458 CDS Human protein_coding chr20:238421 chr20:238422 nonsynonymous SNV 0.210 4 22 hPsi_associated_SNPs_30123 0 0 0 0 1 unknown 0.438718629966744 0.43871853414065 0 0 hPsi_site_23847 iPseU_CNN:0;iRNA_PseU:0 23848 chr11 55658894 55658894 1 + G A LUSC 55658893 + 55658873 55658913 41 AGGGACTCTTTCTTCTTGGATGTGTTAAGGAGGACACTCAC AGGGACTCTTTCTTCTTGGATATGTTAAGGAGGACACTCAC < 41bp 0.571279073034391 0.891335773357096 0.29238522 0.46092826 prediction 0.64011340064541 Functional Gain - TRIM51 ENSG00000124900 CDS Human protein_coding chr11:55658893 chr11:55658894 nonsynonymous SNV 0.024 3 22 hPsi_associated_SNPs_30124 0 0 0 0 0 unknown 0.438712795947672 0.438709367369379 0 0 hPsi_site_23848 iPseU_CNN:0;iRNA_PseU:0 23849 chr4 71347351 71347351 1 + C A OV 71347350 + 71347330 71347370 41 CTACACCAGCTCCACCGTCTTCCCCAGCTCCACAAGAGACC CTACACCAGCTCCACCGTCTTACCCAGCTCCACAAGAGACC < 41bp 0.454133893069402 0.820051592101444 0.20169011 0.3050263 prediction 0.640103184202889 Functional Gain - MUC7 ENSG00000171195 CDS Human protein_coding chr4:71347350 chr4:71347351 nonsynonymous SNV 0.001 1 22 hPsi_associated_SNPs_30125 0 0 0 0 0 unknown 0.438718597372387 0.438718459827068 0 0 hPsi_site_23849 iPseU_CNN:0;iRNA_PseU:0 23850 chr14 105179838 105179838 1 + G A LUSC 105179837 + 105179817 105179857 41 GTCATCGATGCCCTGCTGGCTGACATCAGGAAGGGCTTCCA GTCATCGATGCCCTGCTGGCTAACATCAGGAAGGGCTTCCA < 41bp 0.401032238566606 0.820050201850914 0.1766116 0.23726088 prediction 0.640100403701828 Functional Gain - INF2 ENSG00000203485 CDS Human protein_coding chr14:105179837 chr14:105179838 nonsynonymous SNV 0.992 3 22 hPsi_associated_SNPs_30126 0 0 1 0 1 Cytosol 0.438721842679831 0.438719352355622 0 0 hPsi_site_23850 iPseU_CNN:0;iRNA_PseU:0 23851 chr16 68598296 68598296 1 + C A LUAD 68598295 + 68598275 68598315 41 GAGTGTGGAGAAGCCTTTAGTCGACGCTCATCGCTTACTCA GAGTGTGGAGAAGCCTTTAGTAGACGCTCATCGCTTACTCA < 41bp 0.537751441594944 0.857798936058164 0.3112035 0.3383652 prediction 0.64009498892644 Functional Gain - ZFP90 ENSG00000184939 CDS Human protein_coding chr16:68598295 chr16:68598296 synonymous SNV . 0 22 hPsi_associated_SNPs_30127 0 0 1 0 0 Cytosol 0.438718749819059 0.438718658809683 0 0 hPsi_site_23851 iPseU_CNN:0;iRNA_PseU:0 23852 chr17 14207298 14207298 1 + C A rs189279402 14207297 + 14207277 14207317 41 CCACAGGAAGGCTCACGCAGTCTCTTAGGCGGCTGCCCTCC CCACAGGAAGGCTCACGCAGTATCTTAGGCGGCTGCCCTCC < 41bp 0.543731197150203 0.863775435184203 0.35523516 0.77259254 prediction 0.640088476068 Functional Gain - MGC12916 ENSG00000266709 ncRNA_exonic Human lincRNA chr17:14207297 chr17:14207298 . . 0 22 hPsi_associated_SNPs_30128 0 0 1 0 0 unknown 0.438718620844588 0.438718593133112 0.54518508 0 hPsi_site_23852 iPseU_CNN:0.54518508;iRNA_PseU:0 23853 chr19 54177468 54177468 1 + G A SKCM 54177467 + 54177447 54177487 41 CCCAAACCCTCCTTGGGAAGTGAAGCTCAGGCTGTGATTTC CCCAAACCCTCCTTGGGAAGTAAAGCTCAGGCTGTGATTTC < 41bp 0.520111328956944 0.840151940117942 0.22468472 0.34538925 prediction 0.640081222321996 Functional Gain - MIR498 ENSG00000207869 ncRNA_exonic Human miRNA chr19:54177467 chr19:54177468 . . 0 22 hPsi_associated_SNPs_30129 0 0 0 0 0 unknown 0.438718593040271 0.438718582034646 0 0 hPsi_site_23853 iPseU_CNN:0;iRNA_PseU:0 23854 chr7 112124900 112124900 1 + C A UCEC 112124899 + 112124879 112124919 41 ATTCTTCCCAGGACACTGGTTCTTGTGGCATTCAGGAAGAT ATTCTTCCCAGGACACTGGTTATTGTGGCATTCAGGAAGAT < 41bp 0.536889816868171 0.856928687302411 0.23776719 0.29174426 prediction 0.640077740868478 Functional Gain - LSMEM1 ENSG00000181016 CDS Human protein_coding chr7:112124899 chr7:112124900 nonsynonymous SNV 0.004 3 22 hPsi_associated_SNPs_30130 0 0 1 0 2 nucleoplasm 0.438437396931327 0.436888597982777 0 0 hPsi_site_23854 iPseU_CNN:0;iRNA_PseU:0 23855 chr4 53731770 53731770 1 + C A LGG 53731769 + 53731749 53731789 41 GCTGCTCATTCTATGAAGTGTCTGTCAGTGAAAATTATAAT GCTGCTCATTCTATGAAGTGTATGTCAGTGAAAATTATAAT < 41bp 0.530596703951134 0.850633442951549 0.15202203 0.21354046 prediction 0.640073478000829 Functional Gain - RASL11B ENSG00000128045 CDS Human protein_coding chr4:53731769 chr4:53731770 nonsynonymous SNV 0.912 5 22 hPsi_associated_SNPs_30131 0 0 0 0 0 exosome 0.436499749191638 0.437305450607943 0 0 hPsi_site_23855 iPseU_CNN:0;iRNA_PseU:0 23856 chr19 37853087 37853087 1 + G A UCEC 37853086 + 37853066 37853106 41 GCAAGCTCTCAGCCAACATGTGTGGCTGAGTCATCTCTCTC GCAAGCTCTCAGCCAACATGTATGGCTGAGTCATCTCTCTC < 41bp 0.576519485769319 0.896555726022837 0.38945055 0.8355586 prediction 0.640072480507037 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853086 chr19:37853087 synonymous SNV . 0 22 hPsi_associated_SNPs_30132 0 0 1 0 2 exosome 0.438707583043537 0.438731813728069 0.6711172 0 hPsi_site_23856 iPseU_CNN:0.6711172;iRNA_PseU:0 23857 chr16 29370630 29370630 1 + C A UCEC 29370629 + 29370609 29370649 41 TTGTGATGGATGAAGAGAGGTCCAGTATGCTTCCTACCATG TTGTGATGGATGAAGAGAGGTACAGTATGCTTCCTACCATG < 41bp 0.454015148726798 0.820036002213099 0.2331393 0.38035545 prediction 0.640072004426199 Functional Gain - SNX29P2 ENSG00000198106;ENSG00000271699 ncRNA_exonic Human other chr16:29370629 chr16:29370630 . . 0 22 hPsi_associated_SNPs_30133 0 0 0 0 2 unknown 0.438718481543625 0.438973939226635 0 0 hPsi_site_23857 iPseU_CNN:0;iRNA_PseU:0 23858 chr22 21087308 21087308 1 + G A rs547875279 21087307 + 21087287 21087327 41 GTACTTCTTATCTGAGAACATGGCGGTCCAAAATTTAATCA GTACTTCTTATCTGAGAACATAGCGGTCCAAAATTTAATCA < 41bp 0.55173925916046 0.871772951130152 0.14366356 0.1599553 prediction 0.640067383939386 Functional Gain - PI4KA ENSG00000241973 CDS Human protein_coding chr22:21087307 chr22:21087308 synonymous SNV . 0 22 hPsi_associated_SNPs_30134 0 0 0 0 0 Cytosol 0.438709813545954 0.438800198770881 0 0 hPsi_site_23858 iPseU_CNN:0;iRNA_PseU:0 23859 chr11 55595300 55595300 1 + G A LUAD 55595299 + 55595279 55595319 41 TGAGACACTGCTGTTCCTGGTGGCCACTTTGAATGAGAGTG TGAGACACTGCTGTTCCTGGTAGCCACTTTGAATGAGAGTG < 41bp 0.425541343440722 0.820031451775886 0.13485307 0.19149682 prediction 0.640062903551773 Functional Gain - OR5L2 ENSG00000205030 CDS Human protein_coding chr11:55595299 chr11:55595300 synonymous SNV . 0 22 hPsi_associated_SNPs_30135 0 0 0 0 0 unknown 0.43871688211421 0.442881652998204 0 0 hPsi_site_23859 iPseU_CNN:0;iRNA_PseU:0 23860 chr9 133747572 133747572 1 + C A UCEC 133747571 + 133747551 133747591 41 AGCTGCAGTCATGAAAGAGATCAAACACCCTAACCTGGTGC AGCTGCAGTCATGAAAGAGATAAAACACCCTAACCTGGTGC < 41bp 0.445485436642641 0.820030996237412 0.30562243 0.33464795 prediction 0.640061992474825 Functional Gain - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133747571 chr9:133747572 synonymous SNV . 0 22 hPsi_associated_SNPs_30136 0 0 1 0 2 Endoplasmic reticulum 0.438718933309592 0.43871859347415 0 0 hPsi_site_23860 iPseU_CNN:0;iRNA_PseU:0 23861 chr4 148944461 148944461 1 + G A LIHC 148944460 + 148944440 148944480 41 ATTCCCTGAGCCCACCTGCCTGTCAGCATCACCCCCAAATG ATTCCCTGAGCCCACCTGCCTATCAGCATCACCCCCAAATG < 41bp 0.398971843857166 0.820030822162903 0.24887946 0.28694105 prediction 0.640061644325807 Functional Gain - ARHGAP10 ENSG00000071205 CDS Human protein_coding chr4:148944460 chr4:148944461 synonymous SNV . 0 22 hPsi_associated_SNPs_30137 0 0 0 0 1 Nucleus 0.438705688368712 0.438740258027761 0 0 hPsi_site_23861 iPseU_CNN:0;iRNA_PseU:0 23862 chr4 1730411 1730411 1 + G A CESC 1730410 + 1730390 1730430 41 GACACCAAGTCTGGTTGCAGTGAGGCCCAGCCCCCAGAAAG GACACCAAGTCTGGTTGCAGTAAGGCCCAGCCCCCAGAAAG < 41bp 0.407823862870065 0.820030800182929 0.24786851 0.55523443 prediction 0.640061600365857 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730410 chr4:1730411 nonsynonymous SNV 0.000 0 22 hPsi_associated_SNPs_30138 0 0 1 0 0 Cytosol 0.438718592995102 0.438718592995102 0.11046886 0 hPsi_site_23862 iPseU_CNN:0.11046886;iRNA_PseU:0 23863 chr5 137802793 137802793 1 + G A LUAD 137802792 + 137802772 137802812 41 CCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTT CCGAACACTGACATTTTCCCTAAGCCACAAAGCCAGGCCTT < 41bp 0.413592476840607 0.820026145720489 0.28009933 0.45994386 prediction 0.640052291440978 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137802792 chr5:137802793 nonsynonymous SNV 0.999 2 22 hPsi_associated_SNPs_30139 0 0 1 0 0 Cytosol 0.438730073800509 0.438718593134655 0 0 hPsi_site_23863 iPseU_CNN:0;iRNA_PseU:0 23864 chr12 54403298 54403298 1 + G T SARC 54403297 + 54403277 54403317 41 CAGGCTACCAGCAGAACCCGTGCTCGCTTAGCTGCCACGGA CAGGCTACCAGCAGAACCCGTTCTCGCTTAGCTGCCACGGA < 41bp 0.505602335096072 0.825626081440338 0.3941762 0.8305779 prediction 0.640047492688532 Functional Gain - HOXC8 ENSG00000037965 CDS Human protein_coding chr12:54403297 chr12:54403298 nonsynonymous SNV 1.000 3 22 hPsi_associated_SNPs_30140 0 0 0 0 0 exosome 0.438718589610556 0.4387185932205 0.6611558 0 hPsi_site_23864 iPseU_CNN:0.6611558;iRNA_PseU:0 23865 chr18 61582809 61582809 1 + C A LUAD 61582808 + 61582788 61582828 41 TGAGCAAAAAGCTAGCTGAATCTGCTCAGGGTAAAAATATC TGAGCAAAAAGCTAGCTGAATATGCTCAGGGTAAAAATATC < 41bp 0.469687655259267 0.820020733839204 0.39071462 0.59643775 prediction 0.640041467678409 Functional Gain - SERPINB10 ENSG00000242550 CDS Human protein_coding chr18:61582808 chr18:61582809 nonsynonymous SNV 0.995 4 22 hPsi_associated_SNPs_30141 0 0 0 0 0 exosome 0.438833054328459 0.438023902131672 0.1928755 0 hPsi_site_23865 iPseU_CNN:0.1928755;iRNA_PseU:0 23866 chr4 145567992 145567992 1 + G A OV 145567991 + 145567971 145568011 41 GAAAAGGAGAGACAGGAGGATGATGTCCCAGCTGGAGCTGC GAAAAGGAGAGACAGGAGGATAATGTCCCAGCTGGAGCTGC < 41bp 0.408058015574983 0.820016855700286 0.3906819 0.7558753 prediction 0.640033711400573 Functional Gain - HHIP ENSG00000164161 CDS Human protein_coding chr4:145567991 chr4:145567992 nonsynonymous SNV 0.999 0 22 hPsi_associated_SNPs_30142 0 0 1 0 0 cytosol 0.438718332364176 0.438718593729111 0.5117506 0 hPsi_site_23866 iPseU_CNN:0.5117506;iRNA_PseU:0 23867 chr15 34395696 34395696 1 + C A READ 34395695 + 34395675 34395715 41 CTTACCTTGGTCAATGACCTTCTTGGCCAAGGGTATTGTGT CTTACCTTGGTCAATGACCTTATTGGCCAAGGGTATTGTGT < 41bp 0.46592280939259 0.82001557978316 0.39134485 0.36015624 prediction 0.640031159566321 Functional Gain - PGBD4 ENSG00000182405 CDS Human protein_coding chr15:34395695 chr15:34395696 nonsynonymous SNV 0.969 1 22 hPsi_associated_SNPs_30143 0 0 0 0 0 exosome 0.438717665211812 0.438723937571256 0 0 hPsi_site_23867 iPseU_CNN:0;iRNA_PseU:0 23868 chr17 33319639 33319639 1 + G A rs3135988 33319638 + 33319618 33319658 41 CCTTCACAACGCGCAGGAGGTGGAGAAGGAGCCGGGCCAGA CCTTCACAACGCGCAGGAGGTAGAGAAGGAGCCGGGCCAGA < 41bp 0.387836206636488 0.820015208244427 0.3680596 0.77333754 prediction 0.640030416488853 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33319638 chr17:33319639 synonymous SNV . 0 22 hPsi_associated_SNPs_30144 0 0 1 0 2 Cytosol 0.438718484985497 0.438719324321814 0.54667508 0 hPsi_site_23868 iPseU_CNN:0.54667508;iRNA_PseU:0 23869 chr14 75747316 75747316 1 + G A CESC 75747315 + 75747295 75747335 41 CCGAAGGGAAAGGAATAAGATGGCTGCAGCCAAATGCCGCA CCGAAGGGAAAGGAATAAGATAGCTGCAGCCAAATGCCGCA < 41bp 0.586182164697369 0.906197106888211 0.20805195 0.3210559 prediction 0.640029884381683 Functional Gain - FOS ENSG00000170345 CDS Human protein_coding chr14:75747315 chr14:75747316 nonsynonymous SNV 1.000 1 22 hPsi_associated_SNPs_30145 0 0 1 0 2 Endoplasmic reticulum 0.43871859299509 0.438718588998602 0 0 hPsi_site_23869 iPseU_CNN:0;iRNA_PseU:0 23870 chr4 9452101 9452101 1 + C A ACC 9452100 + 9452080 9452120 41 TTAAAGCCAGAAGCTTCATTTCTAATGATGAATGTCCTTCA TTAAAGCCAGAAGCTTCATTTATAATGATGAATGTCCTTCA < 41bp 0.50679417276409 0.82680023877019 0.36422822 0.48892173 prediction 0.640012132012199 Functional Gain - DEFB131A ENSG00000186146 CDS Human protein_coding chr4:9452100 chr4:9452101 nonsynonymous SNV 0.052 0 22 hPsi_associated_SNPs_30146 0 0 0 0 1 unknown 0.438720944447034 0.438722022176405 0 0 hPsi_site_23870 iPseU_CNN:0;iRNA_PseU:0 23871 chr6 72006477 72006477 1 + G T COAD 72006476 + 72006456 72006496 41 ACTGATAAAACTGGAAATGTTGCTCGGGCTGTTAACTGGCA ACTGATAAAACTGGAAATGTTTCTCGGGCTGTTAACTGGCA < 41bp 0.515199410927422 0.835205333937103 0.3169875 0.44686738 prediction 0.640011846019361 Functional Gain - OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72006476 chr6:72006477 nonsynonymous SNV 0.998 0 22 hPsi_associated_SNPs_30147 0 0 1 0 1 exosome 0.438718593573285 0.438718593006701 0 0 hPsi_site_23871 iPseU_CNN:0;iRNA_PseU:0 23872 chr14 20692411 20692411 1 + C A UCEC 20692410 + 20692390 20692430 41 TCCAGTCCCTATTGTTCTTATCTCCCAACTTCCCTTCTGTG TCCAGTCCCTATTGTTCTTATATCCCAACTTCCCTTCTGTG < 41bp 0.458795258791083 0.820005254334449 0.4055788 0.4478667 prediction 0.640010508668897 Functional Gain - OR11H6 ENSG00000176219 CDS Human protein_coding chr14:20692410 chr14:20692411 synonymous SNV . 0 22 hPsi_associated_SNPs_30148 0 0 0 0 0 unknown 0.438717354114314 0.438781782971174 0 0 hPsi_site_23872 iPseU_CNN:0;iRNA_PseU:0 23873 chr22 18065396 18065396 1 + C A UCEC 18065395 + 18065375 18065415 41 GCTGGCGGCCAACGACTTTTTCCGGCGGCTGCTCATGGAAG GCTGGCGGCCAACGACTTTTTACGGCGGCTGCTCATGGAAG < 41bp 0.566255182809564 0.886256835486234 0.33681136 0.6948737 prediction 0.64000330535334 Functional Gain - SLC25A18 ENSG00000182902 CDS Human protein_coding chr22:18065395 chr22:18065396 nonsynonymous SNV 0.959 0 22 hPsi_associated_SNPs_30149 0 0 0 0 2 exosome 0.438718593010987 0.438718587657842 0.3897474 0 hPsi_site_23873 iPseU_CNN:0.3897474;iRNA_PseU:0 23874 chr9 111625259 111625259 1 + G A rs3739693 111625258 + 111625238 111625278 41 CTCCGGCCTGGTGGTGGAGGTGGGCCATGGCGTGTCCTACG CTCCGGCCTGGTGGTGGAGGTAGGCCATGGCGTGTCCTACG < 41bp 0.403293107648498 0.820001030694428 0.23122153 0.61053216 prediction 0.640002061388855 Functional Gain - ACTL7A ENSG00000187003 CDS Human protein_coding chr9:111625258 chr9:111625259 synonymous SNV . 0 22 hPsi_associated_SNPs_30150 0 0 0 0 0 unknown 0.438718389670876 0.438718562456737 0.22106432 0 hPsi_site_23874 iPseU_CNN:0.22106432;iRNA_PseU:0 23875 chr12 56664288 56664288 1 + G A rs187108537 56664287 + 56664267 56664307 41 GGGAAAGAGAAGGCAAAGGATGTGGAAATGAGATGTGCTTA GGGAAAGAGAAGGCAAAGGATATGGAAATGAGATGTGCTTA < 41bp 0.440074451797671 0.820000911626877 0.24642283 0.25030625 prediction 0.640001823253754 Functional Gain - COQ10A ENSG00000135469 UTR3 Human protein_coding chr12:56664287 chr12:56664288 . . 0 22 hPsi_associated_SNPs_30151 0 0 1 0 0 chromatin 0.438718452691639 0.438718592329903 0 0 hPsi_site_23875 iPseU_CNN:0;iRNA_PseU:0